BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 020035
         (332 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|255572002|ref|XP_002526942.1| ATP synthase mitochondrial F1 complex assembly factor 2,
           mitochondrial precursor, putative [Ricinus communis]
 gi|223533694|gb|EEF35429.1| ATP synthase mitochondrial F1 complex assembly factor 2,
           mitochondrial precursor, putative [Ricinus communis]
          Length = 334

 Score =  488 bits (1256), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 255/334 (76%), Positives = 284/334 (85%), Gaps = 5/334 (1%)

Query: 1   MAASLIPKTLQSIRNPNAISSFTTFRTRHLCSVATVHQSPQYDDDPTSSFTFSSPSDKIN 60
           MA SLI KTL SI+NP  +S  ++  T H  + AT   + Q  D P+S FTF+  +   N
Sbjct: 1   MATSLITKTLNSIKNPRLLSPLSSSVTHHFTTAATAATAAQ-SDGPSSPFTFTDTATSTN 59

Query: 61  ESIYIK----GRKQETASSSSSSVTMPMSFMTGSIVGKRFYEKVSTREADDGNGWTVMLD 116
            SI++K      + E  S SSSSVTMPMSFMTGSIVGKRFY+KV+TREADDG G+TVMLD
Sbjct: 60  NSIHMKTPNPDARGEATSFSSSSVTMPMSFMTGSIVGKRFYKKVTTREADDGIGYTVMLD 119

Query: 117 YRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRPFMMPLMKLACTALERVPLTRPKI 176
           YRTLKTPSK+PLKLPTL LAKAI AEWD QQTDGIRPF MPLMKLACTALERVPLTR KI
Sbjct: 120 YRTLKTPSKKPLKLPTLSLAKAIAAEWDCQQTDGIRPFTMPLMKLACTALERVPLTRLKI 179

Query: 177 IEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDPLLKWVESEFGFKPVVYSSFFGGK 236
           IE+LMKKFNQDLVFCRAP DNDLTSGV+ERQV+KIDPLL WV+SEFGFKPVVYSSFFGGK
Sbjct: 180 IENLMKKFNQDLVFCRAPEDNDLTSGVYERQVEKIDPLLDWVKSEFGFKPVVYSSFFGGK 239

Query: 237 QEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDL 296
           QE+GL+K +E+L+KKTD+ ELAAIDAIAA+AHSLVIAIGI RGKL IEEAI+LIRLEEDL
Sbjct: 240 QEEGLVKAIEDLLKKTDNCELAAIDAIAASAHSLVIAIGIVRGKLDIEEAIQLIRLEEDL 299

Query: 297 QVDKWGLVEGGHDIDIADLRVQISSATVFLGLSR 330
           QVD+WGLVEGGHDIDIADLRVQISSA VFLGLSR
Sbjct: 300 QVDRWGLVEGGHDIDIADLRVQISSAAVFLGLSR 333


>gi|118488474|gb|ABK96051.1| unknown [Populus trichocarpa]
          Length = 330

 Score =  484 bits (1245), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 241/339 (71%), Positives = 273/339 (80%), Gaps = 17/339 (5%)

Query: 1   MAASLIPKTLQSIRNPNAISSFTTFRTRHLCSVATVHQSPQYDDDPTSSFTFSSPSDKIN 60
           MA SLI KTL SI+NP  +   T    R   S+ATV       ++P+SSFTF+      +
Sbjct: 1   MATSLITKTLNSIKNPKLLRPLT----RQFTSIATVQS-----ENPSSSFTFADSDSNSS 51

Query: 61  ES-----IYIKGRKQET---ASSSSSSVTMPMSFMTGSIVGKRFYEKVSTREADDGNGWT 112
            S     IY++             SSSVTMPMS MTGSIVGKRFY++V+TREADDGNGW 
Sbjct: 52  SSCNDSNIYMRKGPPNCNVKGEKDSSSVTMPMSSMTGSIVGKRFYKQVTTREADDGNGWN 111

Query: 113 VMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRPFMMPLMKLACTALERVPLT 172
           VMLDYRTLKTPSKRPLKLPTL LAKAI AEWDYQQTDGIRPF MPLMKLACTAL+RVPLT
Sbjct: 112 VMLDYRTLKTPSKRPLKLPTLALAKAIAAEWDYQQTDGIRPFTMPLMKLACTALDRVPLT 171

Query: 173 RPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDPLLKWVESEFGFKPVVYSSF 232
           RPKIIEHLMKKF+QDLVFCRAP DN LTSGV+ERQV+K DPL+ W++SEFGFKPVV+S  
Sbjct: 172 RPKIIEHLMKKFSQDLVFCRAPEDNVLTSGVYERQVEKFDPLIGWIKSEFGFKPVVHSCL 231

Query: 233 FGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIRL 292
           FGGKQE+GL+K +ENL+K+TDD +LA IDAIA+AAHSL+IA+GI +GKL IEEAIELIRL
Sbjct: 232 FGGKQEEGLVKAIENLLKQTDDCQLAVIDAIASAAHSLIIAVGIVKGKLDIEEAIELIRL 291

Query: 293 EEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGLSRR 331
           EED QVD WGLVEGGHDIDIADLRVQISSA VFLGLSR+
Sbjct: 292 EEDFQVDTWGLVEGGHDIDIADLRVQISSAAVFLGLSRK 330


>gi|225452226|ref|XP_002268368.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor 2
           [Vitis vinifera]
 gi|296081322|emb|CBI17704.3| unnamed protein product [Vitis vinifera]
          Length = 328

 Score =  482 bits (1240), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 245/331 (74%), Positives = 284/331 (85%), Gaps = 4/331 (1%)

Query: 1   MAASLIPKTLQSIRNPNAISSFTTFRTRHLCSVATVHQSPQYDDDPTSSFTFSSPSDKIN 60
           MA++++ KTL SI+NP  +   ++  T    +VAT  ++P+  +  +SSFTF+  +   +
Sbjct: 1   MASAVMKKTLTSIKNPLILRGLSS-HTLRFSAVATA-RNPE-SEGASSSFTFNEKNSDKD 57

Query: 61  ESIYIKGRKQETASSSSSSVTMPMSFMTGSIVGKRFYEKVSTREADDGNGWTVMLDYRTL 120
           +SI++KG         ++SVTMPMSFMTGSIVGKRFY++ STREADDGNGWTVMLDYRTL
Sbjct: 58  DSIHVKG-PSSNPRRETTSVTMPMSFMTGSIVGKRFYKQASTREADDGNGWTVMLDYRTL 116

Query: 121 KTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRPFMMPLMKLACTALERVPLTRPKIIEHL 180
           KTPSKRPLKLPTL LAKAI AEW+YQQTDGIRPF MPLMKLACTALERVPLTR KIIE+L
Sbjct: 117 KTPSKRPLKLPTLSLAKAIAAEWEYQQTDGIRPFTMPLMKLACTALERVPLTRMKIIEYL 176

Query: 181 MKKFNQDLVFCRAPADNDLTSGVHERQVQKIDPLLKWVESEFGFKPVVYSSFFGGKQEDG 240
           MKKF+QDLVFCRAP D+DLT GV ERQV+KIDPLL+WVES+FGFKP+VYSSFFGGKQEDG
Sbjct: 177 MKKFHQDLVFCRAPGDSDLTIGVLERQVEKIDPLLQWVESQFGFKPIVYSSFFGGKQEDG 236

Query: 241 LIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDK 300
           L+  +ENL+KKTDD ELAAIDAIA+AAHSL IAIGIFRGKLQIEEAIELIRLEEDLQVDK
Sbjct: 237 LVNAIENLLKKTDDCELAAIDAIASAAHSLTIAIGIFRGKLQIEEAIELIRLEEDLQVDK 296

Query: 301 WGLVEGGHDIDIADLRVQISSATVFLGLSRR 331
           WGLVEGGHD+D+ADL+VQISSA  FLGLSRR
Sbjct: 297 WGLVEGGHDVDVADLKVQISSAAAFLGLSRR 327


>gi|449455898|ref|XP_004145687.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor
           2-like [Cucumis sativus]
 gi|449492905|ref|XP_004159136.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor
           2-like [Cucumis sativus]
          Length = 330

 Score =  473 bits (1217), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 248/333 (74%), Positives = 286/333 (85%), Gaps = 6/333 (1%)

Query: 1   MAASLIPKTLQSIRNPN-AISSFTTFRTRHLC-SVATVHQSPQYDDDPTSSFTFSSPSDK 58
           M++S++ K  +SIR  N  +S   +FR R LC SVAT  +    DD   +SFTFS+ + +
Sbjct: 1   MSSSILSKMAKSIRITNPTLSPSHSFRYRMLCTSVATAAEQSPLDD---TSFTFSNDNPR 57

Query: 59  INESIYIKGRKQETASSSSSSVTMPMSFMTGSIVGKRFYEKVSTREADDGNGWTVMLDYR 118
            +E +++K  +  ++S SSSSVTMP SFMTGSIVGKRFY+KV+TREADD NGW VMLDYR
Sbjct: 58  -DEPVFVKAPRSNSSSRSSSSVTMPTSFMTGSIVGKRFYQKVTTREADDRNGWAVMLDYR 116

Query: 119 TLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRPFMMPLMKLACTALERVPLTRPKIIE 178
           TLKTP+KRPLKLPTLGLAKA+ AEW+YQ+TDGIRPF MPLMKLACTALERVPLTR  IIE
Sbjct: 117 TLKTPTKRPLKLPTLGLAKAVAAEWEYQETDGIRPFTMPLMKLACTALERVPLTRHTIIE 176

Query: 179 HLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDPLLKWVESEFGFKPVVYSSFFGGKQE 238
           HL+KKFN DLVFCRAP +N LTSGV+ERQV+KIDPLL WV SEFGFKP+VYSSFFGG QE
Sbjct: 177 HLIKKFNSDLVFCRAPEENVLTSGVYERQVEKIDPLLDWVHSEFGFKPIVYSSFFGGNQE 236

Query: 239 DGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQV 298
           DGLIK VE+L+KKT+D ELA+IDAIA+AAHSL+IAIGIFRGKLQIEEAIELIRLEEDLQV
Sbjct: 237 DGLIKAVEDLLKKTNDCELASIDAIASAAHSLIIAIGIFRGKLQIEEAIELIRLEEDLQV 296

Query: 299 DKWGLVEGGHDIDIADLRVQISSATVFLGLSRR 331
           DKWGLVEGGHD+DIADL+VQISSATVFL LSRR
Sbjct: 297 DKWGLVEGGHDVDIADLQVQISSATVFLALSRR 329


>gi|307136314|gb|ADN34137.1| ATP12-like protein [Cucumis melo subsp. melo]
          Length = 329

 Score =  473 bits (1217), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 248/333 (74%), Positives = 284/333 (85%), Gaps = 7/333 (2%)

Query: 1   MAASLIPKTLQSIR--NPNAISSFTTFRTRHLCSVATVHQSPQYDDDPTSSFTFSSPSDK 58
           M+ S++    +SIR  NP    S + FR R LC+  +V  +P+      +SFTFS+ + +
Sbjct: 1   MSTSILSIMAKSIRITNPTLTPSHS-FRYRMLCT--SVATAPEQSPSDAASFTFSNDNPR 57

Query: 59  INESIYIKGRKQETASSSSSSVTMPMSFMTGSIVGKRFYEKVSTREADDGNGWTVMLDYR 118
             E ++IK  +  ++S SSSSVTMP SFMTGSIVGKRFY+KV+TREADDGNGWTVMLDYR
Sbjct: 58  -EEPVFIKAPRSNSSSPSSSSVTMPTSFMTGSIVGKRFYQKVTTREADDGNGWTVMLDYR 116

Query: 119 TLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRPFMMPLMKLACTALERVPLTRPKIIE 178
           TLKTP+KRPLKLPTLGLAKA+ AEW+YQ+TDGIRPF MPLMKLACTALERVPLTRPKIIE
Sbjct: 117 TLKTPTKRPLKLPTLGLAKAVAAEWEYQETDGIRPFTMPLMKLACTALERVPLTRPKIIE 176

Query: 179 HLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDPLLKWVESEFGFKPVVYSSFFGGKQE 238
           HLM KFN+DLVFCRAP D DLTSGV+ERQV+KIDPLL WV SEFGFKP+VYSS FGG QE
Sbjct: 177 HLMGKFNRDLVFCRAPED-DLTSGVYERQVEKIDPLLDWVHSEFGFKPIVYSSLFGGNQE 235

Query: 239 DGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQV 298
           DGLIK VE+L++KTDD ELA+IDAIA+AAHSL+IAIGIFRGKLQIEEAIELIRLEED QV
Sbjct: 236 DGLIKAVEDLLRKTDDCELASIDAIASAAHSLIIAIGIFRGKLQIEEAIELIRLEEDFQV 295

Query: 299 DKWGLVEGGHDIDIADLRVQISSATVFLGLSRR 331
           DKWGLVEGGHD+DIADL+VQISSATVFL LSRR
Sbjct: 296 DKWGLVEGGHDVDIADLQVQISSATVFLALSRR 328


>gi|356558787|ref|XP_003547684.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor
           2-like [Glycine max]
          Length = 326

 Score =  461 bits (1185), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 243/337 (72%), Positives = 276/337 (81%), Gaps = 20/337 (5%)

Query: 1   MAASLIPKTLQSIRNPNAISSFTTFRT----RHLCSVATVHQSPQYDDDPT---SSFTFS 53
           MA SLI K ++    P  ++  T        R L SVA        D+DP    SSFTFS
Sbjct: 1   MAHSLIRKCIK----PATLNFLTPLAVPEIRRRLASVAAAA-----DEDPPQSPSSFTFS 51

Query: 54  SPSDKINESIYIKGRKQETASSSSSSVTMPMSFMTGSIVGKRFYEKVSTREADDGNGWTV 113
           S  +K+    Y+K    +   S SS+VTMPMSFMTGSIVGKRFY++V TREADDGNGWTV
Sbjct: 52  SEGEKV----YVKPPAGKWKPSPSSTVTMPMSFMTGSIVGKRFYKEVKTREADDGNGWTV 107

Query: 114 MLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRPFMMPLMKLACTALERVPLTR 173
           MLDYRTLKTPSKRPLKLP+L LAKAI AEW+YQQTDGIRPF MPLM+LACTALERVPLTR
Sbjct: 108 MLDYRTLKTPSKRPLKLPSLPLAKAIAAEWEYQQTDGIRPFTMPLMRLACTALERVPLTR 167

Query: 174 PKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDPLLKWVESEFGFKPVVYSSFF 233
            K+IE+LMKKFNQDLVFCRAP D++LTS VH RQV+KIDPLL+WVESEFGFKPV+Y+SFF
Sbjct: 168 SKVIENLMKKFNQDLVFCRAPDDDELTSYVHARQVEKIDPLLRWVESEFGFKPVLYTSFF 227

Query: 234 GGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIRLE 293
           GGKQEDGL+  +ENL+KKTDD ELAAIDAIAA+AHSL+IAIG+ +GKLQIEEAIELIRLE
Sbjct: 228 GGKQEDGLVMAIENLLKKTDDCELAAIDAIAASAHSLIIAIGMVQGKLQIEEAIELIRLE 287

Query: 294 EDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGLSR 330
           ED QVD+WGLVEGGHD+DIADLRVQ+SSA VFLGLSR
Sbjct: 288 EDSQVDRWGLVEGGHDVDIADLRVQVSSAIVFLGLSR 324


>gi|224060183|ref|XP_002300073.1| predicted protein [Populus trichocarpa]
 gi|222847331|gb|EEE84878.1| predicted protein [Populus trichocarpa]
          Length = 270

 Score =  457 bits (1175), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 217/267 (81%), Positives = 240/267 (89%), Gaps = 6/267 (2%)

Query: 65  IKGRKQETASSSSSSVTMPMSFMTGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPS 124
           +KG K       SSSVTMPMS MTGSIVGKRFY++V+TREADDGNGW VMLDYRTLKTPS
Sbjct: 10  VKGEK------DSSSVTMPMSSMTGSIVGKRFYKQVTTREADDGNGWNVMLDYRTLKTPS 63

Query: 125 KRPLKLPTLGLAKAIGAEWDYQQTDGIRPFMMPLMKLACTALERVPLTRPKIIEHLMKKF 184
           KRPLKLPTL LAKAI AEWDYQQTDGIRPF MPLMKLACTAL+RVPLTRPKIIEHLMKKF
Sbjct: 64  KRPLKLPTLALAKAIAAEWDYQQTDGIRPFTMPLMKLACTALDRVPLTRPKIIEHLMKKF 123

Query: 185 NQDLVFCRAPADNDLTSGVHERQVQKIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKT 244
           +QDLVFCRAP DN LTSGV+ERQV+K DPL+ W++SEFGFKPVV+S  FGGKQE+GL+K 
Sbjct: 124 SQDLVFCRAPEDNVLTSGVYERQVEKFDPLIGWIKSEFGFKPVVHSCLFGGKQEEGLVKA 183

Query: 245 VENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLV 304
           +ENL+K+TDD +LA IDAIA+AAHSL+IA+GI +GKL IEEAIELIRLEED QVD WGLV
Sbjct: 184 IENLLKQTDDCQLAVIDAIASAAHSLIIAVGIVKGKLDIEEAIELIRLEEDFQVDTWGLV 243

Query: 305 EGGHDIDIADLRVQISSATVFLGLSRR 331
           EGGHDIDIADLRVQISSA VFLGLSR+
Sbjct: 244 EGGHDIDIADLRVQISSAAVFLGLSRK 270


>gi|388518015|gb|AFK47069.1| unknown [Medicago truncatula]
          Length = 321

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 237/331 (71%), Positives = 269/331 (81%), Gaps = 13/331 (3%)

Query: 1   MAASLIPKTLQSIRNPNAISSFTTFR-TRHLCSVATVHQSPQYDDDPTSSFTFSSPSDKI 59
           MA SLI  +++SI NP  +S+ +  R  R   S A        D++ +SSFTFSS  D I
Sbjct: 1   MAHSLIKNSIKSI-NPKFLSTLSAHRIVRRFGSAAAA------DEEQSSSFTFSSEGDSI 53

Query: 60  NESIYIKGRKQETASSSSSSVTMPMSFMTGSIVGKRFYEKVSTREADDGNGWTVMLDYRT 119
                   R++      SSSVTMP+SFMTGSIVGKRFY++V T+EADDGNGWTVMLDYRT
Sbjct: 54  QLKSPSAARRK-----LSSSVTMPISFMTGSIVGKRFYKEVKTKEADDGNGWTVMLDYRT 108

Query: 120 LKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRPFMMPLMKLACTALERVPLTRPKIIEH 179
           LKTP+KRPLKLPT+ LAKAI AEWDYQQ DGIRPF MPLM+LACTALERVP+TRPKIIEH
Sbjct: 109 LKTPAKRPLKLPTVALAKAIAAEWDYQQIDGIRPFTMPLMRLACTALERVPVTRPKIIEH 168

Query: 180 LMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDPLLKWVESEFGFKPVVYSSFFGGKQED 239
           L++KFNQDLVFCRAP DN+L S V+ERQV KIDPLL W+ESEFGFKPVVYSSFFGGKQED
Sbjct: 169 LVEKFNQDLVFCRAPDDNELASLVYERQVDKIDPLLHWLESEFGFKPVVYSSFFGGKQED 228

Query: 240 GLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVD 299
           GL+  +E L+KKTDD ELAAIDAIAA+A SL IAI +  G+LQIEEAIELIRLEEDLQVD
Sbjct: 229 GLVMAIEKLLKKTDDCELAAIDAIAASAQSLTIAIALVHGRLQIEEAIELIRLEEDLQVD 288

Query: 300 KWGLVEGGHDIDIADLRVQISSATVFLGLSR 330
           +WGLVEGGHDIDIAD+RVQISS  VFLGLSR
Sbjct: 289 RWGLVEGGHDIDIADIRVQISSPVVFLGLSR 319


>gi|21592835|gb|AAM64785.1| unknown [Arabidopsis thaliana]
          Length = 325

 Score =  449 bits (1156), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 231/339 (68%), Positives = 264/339 (77%), Gaps = 21/339 (6%)

Query: 1   MAASLIPKTLQSIRNPNAISSFTTFRTRHLCSVATVHQSPQYDDDPTSS---FTFSSPSD 57
           MAA LI +  +S RN N        R R LC+ +   Q P  D  P+ S   FTF   ++
Sbjct: 1   MAAMLIGRAFKSARNSN-----LAIRARSLCTTSAARQ-PDSDTQPSESSSSFTFEKENE 54

Query: 58  KINESIYIKG----RKQETASSSSSSVTMPMSFMTGSIVGKRFYEKVSTREADDGNGWTV 113
           K    I +K     RK E     S SVTMP SFMTGSIVGKRFY+KV+TREADDGNGWTV
Sbjct: 55  K---PILVKAPNSRRKNE-----SDSVTMPTSFMTGSIVGKRFYKKVTTREADDGNGWTV 106

Query: 114 MLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRPFMMPLMKLACTALERVPLTR 173
           MLDYRTLKTPSKRPLKL +L LAKAI AEW+YQ T+GIRPF MPLM+LACTALERVPLTR
Sbjct: 107 MLDYRTLKTPSKRPLKLRSLALAKAIAAEWEYQLTEGIRPFTMPLMRLACTALERVPLTR 166

Query: 174 PKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDPLLKWVESEFGFKPVVYSSFF 233
            KIIEHL +K +QDLVF RAP DNDLTS VH+ QV+ IDPLLKW+ESEF  KP VYSS F
Sbjct: 167 SKIIEHLSRKIHQDLVFFRAPEDNDLTSDVHDIQVESIDPLLKWIESEFRVKPKVYSSIF 226

Query: 234 GGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIRLE 293
           GGKQ+D L+K VE L+KKT+D ELA+IDA+ A+AHS+VIA+GIF GKLQI++AI+LIRLE
Sbjct: 227 GGKQDDKLVKAVEELLKKTNDGELASIDALQASAHSIVIALGIFCGKLQIDDAIKLIRLE 286

Query: 294 EDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGLSRRN 332
           EDLQVDKWGLVEGGHDID+ADL+VQISSATVFL LSR N
Sbjct: 287 EDLQVDKWGLVEGGHDIDVADLKVQISSATVFLALSREN 325


>gi|15237466|ref|NP_198882.1| ATP synthase mitochondrial F1 complex assembly factor 2
           [Arabidopsis thaliana]
 gi|14517426|gb|AAK62603.1| AT5g40660/MNF13_180 [Arabidopsis thaliana]
 gi|22655442|gb|AAM98313.1| At5g40660/MNF13_180 [Arabidopsis thaliana]
 gi|332007196|gb|AED94579.1| ATP synthase mitochondrial F1 complex assembly factor 2
           [Arabidopsis thaliana]
          Length = 325

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 230/339 (67%), Positives = 264/339 (77%), Gaps = 21/339 (6%)

Query: 1   MAASLIPKTLQSIRNPNAISSFTTFRTRHLCSVATVHQSPQYDDDPTSS---FTFSSPSD 57
           MAA LI +  +S RN N        R R LC+ +   Q P  D  P+ S   FTF   ++
Sbjct: 1   MAAMLIGRAFKSARNSN-----LAIRARSLCTTSAARQ-PDSDTQPSESSSSFTFEKENE 54

Query: 58  KINESIYIKG----RKQETASSSSSSVTMPMSFMTGSIVGKRFYEKVSTREADDGNGWTV 113
           K    I +K     RK E     S SVTMP SFMTGSIVGKRFY+KV+TREADDGNGWTV
Sbjct: 55  K---PILVKAPNSRRKNE-----SDSVTMPTSFMTGSIVGKRFYKKVTTREADDGNGWTV 106

Query: 114 MLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRPFMMPLMKLACTALERVPLTR 173
           MLDYRTLKTPSKRPLKL +L LAKAI AEW+YQ T+GIRPF MPLM+LACTALERVPLTR
Sbjct: 107 MLDYRTLKTPSKRPLKLRSLALAKAIAAEWEYQLTEGIRPFTMPLMRLACTALERVPLTR 166

Query: 174 PKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDPLLKWVESEFGFKPVVYSSFF 233
            KIIEHL +K +QDLVF RAP DNDLTS VH+ QV+ IDPLL+W+ESEF  KP VYSS F
Sbjct: 167 SKIIEHLSRKIHQDLVFFRAPEDNDLTSDVHDIQVESIDPLLEWIESEFRVKPKVYSSIF 226

Query: 234 GGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIRLE 293
           GGKQ+D L+K VE L+KKT+D ELA+IDA+ A+AHS+VIA+GIF GKLQI++AI+LIRLE
Sbjct: 227 GGKQDDKLVKAVEELLKKTNDGELASIDALQASAHSIVIALGIFCGKLQIDDAIKLIRLE 286

Query: 294 EDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGLSRRN 332
           EDLQVDKWGLVEGGHDID+ADL+VQISSATVFL LSR N
Sbjct: 287 EDLQVDKWGLVEGGHDIDVADLKVQISSATVFLALSREN 325


>gi|297801514|ref|XP_002868641.1| hypothetical protein ARALYDRAFT_493916 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297314477|gb|EFH44900.1| hypothetical protein ARALYDRAFT_493916 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 328

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 227/337 (67%), Positives = 263/337 (78%), Gaps = 14/337 (4%)

Query: 1   MAASLIPKTLQSIRNPNAISSFTTFRTRHLCSVATVHQ-----SPQYDDDPTSSFTFSSP 55
           MAA LI +  +S RN N        R R  C+ +   Q      P      +SSFTF   
Sbjct: 1   MAAMLIGRAFKSARNSN-----LAVRARSFCTTSAARQPDSETQPSESSSSSSSFTF--- 52

Query: 56  SDKINESIYIKGRKQETASSSSSSVTMPMSFMTGSIVGKRFYEKVSTREADDGNGWTVML 115
            +K NE   +        ++ S SVTMP SFMTGSIVGKRFY+KV+TREADDGNGWTVML
Sbjct: 53  -EKGNEKPILVKAPNTRRNNESDSVTMPTSFMTGSIVGKRFYKKVTTREADDGNGWTVML 111

Query: 116 DYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRPFMMPLMKLACTALERVPLTRPK 175
           DYRTLKTPSKRPLKL +L LAKAI AEW+YQ T+GIRPF MPLM+LACTALERVPLTR K
Sbjct: 112 DYRTLKTPSKRPLKLRSLALAKAIAAEWEYQLTEGIRPFTMPLMRLACTALERVPLTRSK 171

Query: 176 IIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDPLLKWVESEFGFKPVVYSSFFGG 235
           IIEHL +K +QDLVF RAP DNDLT+ VHE QV++IDPLL+WVESEFG KP +YSS FGG
Sbjct: 172 IIEHLSRKLHQDLVFFRAPEDNDLTTDVHEIQVERIDPLLEWVESEFGIKPNLYSSIFGG 231

Query: 236 KQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIRLEED 295
           KQ+D L+K VE+L+KKT+D ELA+IDA+ A+AHS+VIA+GIF GKLQI++AI+LIRLEED
Sbjct: 232 KQDDKLVKAVEDLLKKTNDGELASIDALQASAHSIVIALGIFCGKLQIDDAIKLIRLEED 291

Query: 296 LQVDKWGLVEGGHDIDIADLRVQISSATVFLGLSRRN 332
           LQVDKWGLVEGGHDIDIADL+VQISSATVFL LSR N
Sbjct: 292 LQVDKWGLVEGGHDIDIADLKVQISSATVFLALSREN 328


>gi|9758094|dbj|BAB08538.1| unnamed protein product [Arabidopsis thaliana]
          Length = 322

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 227/335 (67%), Positives = 261/335 (77%), Gaps = 21/335 (6%)

Query: 5   LIPKTLQSIRNPNAISSFTTFRTRHLCSVATVHQSPQYDDDPTSS---FTFSSPSDKINE 61
           LI +  +S RN N        R R LC+ +   Q P  D  P+ S   FTF   ++K   
Sbjct: 2   LIGRAFKSARNSN-----LAIRARSLCTTSAARQ-PDSDTQPSESSSSFTFEKENEK--- 52

Query: 62  SIYIKG----RKQETASSSSSSVTMPMSFMTGSIVGKRFYEKVSTREADDGNGWTVMLDY 117
            I +K     RK E     S SVTMP SFMTGSIVGKRFY+KV+TREADDGNGWTVMLDY
Sbjct: 53  PILVKAPNSRRKNE-----SDSVTMPTSFMTGSIVGKRFYKKVTTREADDGNGWTVMLDY 107

Query: 118 RTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRPFMMPLMKLACTALERVPLTRPKII 177
           RTLKTPSKRPLKL +L LAKAI AEW+YQ T+GIRPF MPLM+LACTALERVPLTR KII
Sbjct: 108 RTLKTPSKRPLKLRSLALAKAIAAEWEYQLTEGIRPFTMPLMRLACTALERVPLTRSKII 167

Query: 178 EHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDPLLKWVESEFGFKPVVYSSFFGGKQ 237
           EHL +K +QDLVF RAP DNDLTS VH+ QV+ IDPLL+W+ESEF  KP VYSS FGGKQ
Sbjct: 168 EHLSRKIHQDLVFFRAPEDNDLTSDVHDIQVESIDPLLEWIESEFRVKPKVYSSIFGGKQ 227

Query: 238 EDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQ 297
           +D L+K VE L+KKT+D ELA+IDA+ A+AHS+VIA+GIF GKLQI++AI+LIRLEEDLQ
Sbjct: 228 DDKLVKAVEELLKKTNDGELASIDALQASAHSIVIALGIFCGKLQIDDAIKLIRLEEDLQ 287

Query: 298 VDKWGLVEGGHDIDIADLRVQISSATVFLGLSRRN 332
           VDKWGLVEGGHDID+ADL+VQISSATVFL LSR N
Sbjct: 288 VDKWGLVEGGHDIDVADLKVQISSATVFLALSREN 322


>gi|115473693|ref|NP_001060445.1| Os07g0644000 [Oryza sativa Japonica Group]
 gi|34393715|dbj|BAC83027.1| putative ATP synthase mitochondrial F1 complex assembly factor2
           [Oryza sativa Japonica Group]
 gi|113611981|dbj|BAF22359.1| Os07g0644000 [Oryza sativa Japonica Group]
 gi|218200115|gb|EEC82542.1| hypothetical protein OsI_27075 [Oryza sativa Indica Group]
          Length = 321

 Score =  399 bits (1026), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 192/269 (71%), Positives = 229/269 (85%), Gaps = 2/269 (0%)

Query: 63  IYIKGRKQETASSS--SSSVTMPMSFMTGSIVGKRFYEKVSTREADDGNGWTVMLDYRTL 120
           IY+K      A ++   +SV MPMSFMTGS+VGKRFY + + R ADDGNGW+VMLDYRTL
Sbjct: 50  IYLKKPAAAAAVTTRDETSVAMPMSFMTGSVVGKRFYREATVRRADDGNGWSVMLDYRTL 109

Query: 121 KTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRPFMMPLMKLACTALERVPLTRPKIIEHL 180
           K+P+KRPLKL +  LA AI AEW+YQ+ DGIRPF MPLMKLACTALERVPLTR KII++L
Sbjct: 110 KSPAKRPLKLQSRTLAMAIAAEWEYQEADGIRPFTMPLMKLACTALERVPLTRKKIIDNL 169

Query: 181 MKKFNQDLVFCRAPADNDLTSGVHERQVQKIDPLLKWVESEFGFKPVVYSSFFGGKQEDG 240
           MKKF+QDLVFCR+P DN+LT GV++RQ +KIDP+L WV +EFGFKPVVY+SFFGGKQ++G
Sbjct: 170 MKKFHQDLVFCRSPDDNELTVGVYQRQKEKIDPILDWVNTEFGFKPVVYTSFFGGKQDEG 229

Query: 241 LIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDK 300
           L   VE ++K T D+ELA+IDA+AAAAHSLVI + IFRGKL IE+AIELIRLEED QVD+
Sbjct: 230 LANAVETVLKNTTDFELASIDAMAAAAHSLVIPLAIFRGKLGIEQAIELIRLEEDHQVDR 289

Query: 301 WGLVEGGHDIDIADLRVQISSATVFLGLS 329
           WGLVEGGHD+DIADL+VQ+SSA VFL LS
Sbjct: 290 WGLVEGGHDVDIADLKVQMSSAVVFLLLS 318


>gi|195644694|gb|ACG41815.1| ATP12 ATPase [Zea mays]
 gi|414887877|tpg|DAA63891.1| TPA: ATP12 ATPase [Zea mays]
          Length = 318

 Score =  399 bits (1026), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 189/257 (73%), Positives = 226/257 (87%)

Query: 74  SSSSSSVTMPMSFMTGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTL 133
           +   +SV MP SFMTGS+VGKRFY   + R ADDGNGWTVMLDYRTLK+P+KR LKLP+ 
Sbjct: 60  TRDETSVAMPTSFMTGSVVGKRFYRDATVRRADDGNGWTVMLDYRTLKSPAKRVLKLPSR 119

Query: 134 GLAKAIGAEWDYQQTDGIRPFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRA 193
            LA AI AEW+YQ++DGIRPF MPLMKLACTALERVPLTR K+I++LMKKF+QDLVFCR+
Sbjct: 120 ALAMAIAAEWEYQESDGIRPFTMPLMKLACTALERVPLTRRKVIDNLMKKFHQDLVFCRS 179

Query: 194 PADNDLTSGVHERQVQKIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTD 253
           PAD++LT GVH++Q +KIDP+L+WV++EFGFKPVVY+SFFGGKQ++GL K VE ++KK  
Sbjct: 180 PADSELTIGVHQKQKEKIDPILEWVDTEFGFKPVVYTSFFGGKQDEGLAKAVETVLKKAT 239

Query: 254 DYELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIA 313
           D ELA+IDA+AAAAHSLVI + IFR +L IEEAIELIRLEED QVD+WGLVEGGHD+DIA
Sbjct: 240 DCELASIDAMAAAAHSLVIPLAIFRERLGIEEAIELIRLEEDHQVDRWGLVEGGHDVDIA 299

Query: 314 DLRVQISSATVFLGLSR 330
           DL+VQ+SSA VFLGLSR
Sbjct: 300 DLKVQMSSAVVFLGLSR 316


>gi|226502356|ref|NP_001148797.1| LOC100282414 [Zea mays]
 gi|195622214|gb|ACG32937.1| ATP12 ATPase [Zea mays]
          Length = 318

 Score =  399 bits (1025), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 189/257 (73%), Positives = 226/257 (87%)

Query: 74  SSSSSSVTMPMSFMTGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTL 133
           +   +SV MP SFMTGS+VGKRFY   + R ADDGNGWTVMLDYRTLK+P+KR LKLP+ 
Sbjct: 60  TRDETSVAMPTSFMTGSVVGKRFYRDATVRRADDGNGWTVMLDYRTLKSPAKRVLKLPSR 119

Query: 134 GLAKAIGAEWDYQQTDGIRPFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRA 193
            LA AI AEW+YQ++DGIRPF MPLMKLACTALERVPLTR K+I++LMKKF+QDLVFCR+
Sbjct: 120 ALAMAIAAEWEYQESDGIRPFTMPLMKLACTALERVPLTRRKVIDNLMKKFHQDLVFCRS 179

Query: 194 PADNDLTSGVHERQVQKIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTD 253
           PAD++LT GVH++Q +KIDP+L+WV++EFGFKPVVY+SFFGGKQ++GL K VE ++KK  
Sbjct: 180 PADSELTIGVHQKQKEKIDPILEWVDTEFGFKPVVYTSFFGGKQDEGLAKAVETVLKKAT 239

Query: 254 DYELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIA 313
           D ELA+IDA+AAAAHSLVI + IFR +L IEEAIELIRLEED QVD+WGLVEGGHD+DIA
Sbjct: 240 DCELASIDAMAAAAHSLVIPLAIFRERLGIEEAIELIRLEEDHQVDRWGLVEGGHDVDIA 299

Query: 314 DLRVQISSATVFLGLSR 330
           DL+VQ+SSA VFLGLSR
Sbjct: 300 DLKVQMSSAVVFLGLSR 316


>gi|242051068|ref|XP_002463278.1| hypothetical protein SORBIDRAFT_02g041060 [Sorghum bicolor]
 gi|241926655|gb|EER99799.1| hypothetical protein SORBIDRAFT_02g041060 [Sorghum bicolor]
          Length = 318

 Score =  399 bits (1025), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 189/272 (69%), Positives = 232/272 (85%), Gaps = 2/272 (0%)

Query: 61  ESIYIK--GRKQETASSSSSSVTMPMSFMTGSIVGKRFYEKVSTREADDGNGWTVMLDYR 118
           ++IY+K         +   +SV MP SFMTGS+VGKRFY   + R ADDGNGWTVMLDYR
Sbjct: 45  DAIYVKKPAAAAAVTTRDETSVAMPTSFMTGSVVGKRFYRDATVRRADDGNGWTVMLDYR 104

Query: 119 TLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRPFMMPLMKLACTALERVPLTRPKIIE 178
           TLK+P+KRPLKLP+  LA AI AEW+YQ++DGIRPF MPLMKLACTALERVPLTR K+I+
Sbjct: 105 TLKSPAKRPLKLPSRALAMAIAAEWEYQESDGIRPFTMPLMKLACTALERVPLTRRKVID 164

Query: 179 HLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDPLLKWVESEFGFKPVVYSSFFGGKQE 238
           +LMKKF+QDLVFCR+PAD++LT GVH++Q +KIDP+L+WV++EFGFKP+VY++FFGGKQ+
Sbjct: 165 NLMKKFHQDLVFCRSPADSELTIGVHQKQKEKIDPILEWVDTEFGFKPIVYTTFFGGKQD 224

Query: 239 DGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQV 298
           +GL K VE ++KK  D ELA+IDA+AAAAHSLVI + IFR +L IEEAIELIRLEED QV
Sbjct: 225 EGLAKAVETVLKKATDCELASIDAMAAAAHSLVIPLAIFRERLGIEEAIELIRLEEDHQV 284

Query: 299 DKWGLVEGGHDIDIADLRVQISSATVFLGLSR 330
           D+WGLVEGGHD+DIADL+VQ+SSA VFL L+R
Sbjct: 285 DRWGLVEGGHDVDIADLKVQMSSAVVFLELTR 316


>gi|356574012|ref|XP_003555147.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor
           2-like [Glycine max]
          Length = 278

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 196/243 (80%), Positives = 221/243 (90%)

Query: 88  TGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQ 147
           TG IVGKRFY+++ T+EADDGNGWTVMLDYRTLKTPSKRP KLP+L LAKAI A+W+YQQ
Sbjct: 34  TGLIVGKRFYKELKTQEADDGNGWTVMLDYRTLKTPSKRPFKLPSLPLAKAIAAKWEYQQ 93

Query: 148 TDGIRPFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQ 207
           TDGIRPF MPLM LACTALERVPLTR K+IE+LMKKFNQDLVFCRAP DN+     ++RQ
Sbjct: 94  TDGIRPFTMPLMGLACTALERVPLTRSKVIENLMKKFNQDLVFCRAPDDNERLCTWYDRQ 153

Query: 208 VQKIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAA 267
           V+KIDPLL+WVESEFGFKPVVYSSFFG KQEDGL+  +ENL+KKTDD ELAAIDAIAA+A
Sbjct: 154 VEKIDPLLRWVESEFGFKPVVYSSFFGEKQEDGLLTAIENLLKKTDDCELAAIDAIAASA 213

Query: 268 HSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLG 327
           HSL +AIG+ +GKLQIEEAIELIRLEED QV++WGLVEGGHD+DIADLRVQ+SSA VFLG
Sbjct: 214 HSLTLAIGMVQGKLQIEEAIELIRLEEDFQVNRWGLVEGGHDVDIADLRVQVSSAIVFLG 273

Query: 328 LSR 330
           LSR
Sbjct: 274 LSR 276


>gi|357121729|ref|XP_003562570.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor
           2-like [Brachypodium distachyon]
          Length = 306

 Score =  387 bits (995), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 186/267 (69%), Positives = 223/267 (83%)

Query: 63  IYIKGRKQETASSSSSSVTMPMSFMTGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKT 122
           I++       A+   +SV MPMSFMTGS+VGKRFY   + R ADDGNGWTVMLDYRTLK+
Sbjct: 37  IHVGKPASAAATRDETSVAMPMSFMTGSVVGKRFYRDATVRRADDGNGWTVMLDYRTLKS 96

Query: 123 PSKRPLKLPTLGLAKAIGAEWDYQQTDGIRPFMMPLMKLACTALERVPLTRPKIIEHLMK 182
           P+KRPLKL +  LA AI AEW+YQ +DGIRPF MPLMKLACTALERVPLTR KII +LM+
Sbjct: 97  PAKRPLKLHSRTLAMAIAAEWEYQDSDGIRPFTMPLMKLACTALERVPLTRAKIINNLMQ 156

Query: 183 KFNQDLVFCRAPADNDLTSGVHERQVQKIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLI 242
           KF+QDLVFCR+P D++LT GV+E+Q +KIDP+L WV +EFGFKPVVY+SF GGKQ++ L 
Sbjct: 157 KFHQDLVFCRSPPDDELTKGVYEKQKEKIDPILDWVNTEFGFKPVVYTSFLGGKQDEKLA 216

Query: 243 KTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           K VE ++K  +D ELA+IDA+AAAAHSLVI + IFRG+L I+E+IELIRLEED QVDKWG
Sbjct: 217 KAVETVLKDANDCELASIDAMAAAAHSLVIPLAIFRGRLGIDESIELIRLEEDHQVDKWG 276

Query: 303 LVEGGHDIDIADLRVQISSATVFLGLS 329
           LVEGGHD+DIADL+VQ+SSA VFL LS
Sbjct: 277 LVEGGHDVDIADLKVQMSSAVVFLQLS 303


>gi|222637548|gb|EEE67680.1| hypothetical protein OsJ_25328 [Oryza sativa Japonica Group]
          Length = 369

 Score =  381 bits (978), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 182/256 (71%), Positives = 218/256 (85%), Gaps = 2/256 (0%)

Query: 63  IYIKGRKQETASSS--SSSVTMPMSFMTGSIVGKRFYEKVSTREADDGNGWTVMLDYRTL 120
           IY+K      A ++   +SV MPMSFMTGS+VGKRFY + + R ADDGNGW+VMLDYRTL
Sbjct: 50  IYLKKPAAAAAVTTRDETSVAMPMSFMTGSVVGKRFYREATVRRADDGNGWSVMLDYRTL 109

Query: 121 KTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRPFMMPLMKLACTALERVPLTRPKIIEHL 180
           K+P+KRPLKL +  LA AI AEW+YQ+ DGIRPF MPLMKLACTALERVPLTR KII++L
Sbjct: 110 KSPAKRPLKLQSRTLAMAIAAEWEYQEADGIRPFTMPLMKLACTALERVPLTRKKIIDNL 169

Query: 181 MKKFNQDLVFCRAPADNDLTSGVHERQVQKIDPLLKWVESEFGFKPVVYSSFFGGKQEDG 240
           MKKF+QDLVFCR+P DN+LT GV++RQ +KIDP+L WV +EFGFKPVVY+SFFGGKQ++G
Sbjct: 170 MKKFHQDLVFCRSPDDNELTVGVYQRQKEKIDPILDWVNTEFGFKPVVYTSFFGGKQDEG 229

Query: 241 LIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDK 300
           L   VE ++K T D+ELA+IDA+AAAAHSLVI + IFRGKL IE+AIELIRLEED QVD+
Sbjct: 230 LANAVETVLKNTTDFELASIDAMAAAAHSLVIPLAIFRGKLGIEQAIELIRLEEDHQVDR 289

Query: 301 WGLVEGGHDIDIADLR 316
           WGLVEGGHD+DIADL+
Sbjct: 290 WGLVEGGHDVDIADLQ 305


>gi|388502866|gb|AFK39499.1| unknown [Lotus japonicus]
          Length = 177

 Score =  286 bits (733), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 146/175 (83%), Positives = 161/175 (92%)

Query: 156 MPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDPLL 215
           MPLM+LACTALERVPLTR KII+ LMKKFNQDLVFCRAP DNDLTS V++ QV+K DPLL
Sbjct: 1   MPLMRLACTALERVPLTRTKIIDQLMKKFNQDLVFCRAPDDNDLTSHVYDCQVEKYDPLL 60

Query: 216 KWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIG 275
           +W+ESEFGFKPVVYSSFFGGKQEDGL+  VEN++KKTDD ELAAIDAIAA+AHSL IAI 
Sbjct: 61  RWLESEFGFKPVVYSSFFGGKQEDGLVMAVENVLKKTDDCELAAIDAIAASAHSLTIAIA 120

Query: 276 IFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGLSR 330
           + RGKLQIEEAIELIRLEEDLQVD+WGLVEGGHD+DIADLRVQISS  VFLGL+R
Sbjct: 121 MVRGKLQIEEAIELIRLEEDLQVDRWGLVEGGHDLDIADLRVQISSPIVFLGLTR 175


>gi|302822509|ref|XP_002992912.1| hypothetical protein SELMODRAFT_187108 [Selaginella moellendorffii]
 gi|300139257|gb|EFJ06001.1| hypothetical protein SELMODRAFT_187108 [Selaginella moellendorffii]
          Length = 285

 Score =  236 bits (603), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 114/231 (49%), Positives = 163/231 (70%), Gaps = 5/231 (2%)

Query: 95  RFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRPF 154
           RFY+    R +DDG+ + VMLD  TLKTP K P+ +PT GLA AI AEW++Q   GIRPF
Sbjct: 54  RFYKHARMRPSDDGH-YVVMLDRFTLKTPKKNPVSVPTPGLALAIAAEWEWQTKSGIRPF 112

Query: 155 MMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDPL 214
            MPLMKLA T ++R+P  R  +IE+L+K  + D V+CRAP    L+     +Q Q+ DPL
Sbjct: 113 TMPLMKLAATTIDRLPDFRENVIENLLKYSHADSVYCRAPETEPLS----HKQAQQWDPL 168

Query: 215 LKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAI 274
           +KW+E + G KP V SS   GKQ   ++   + ++   +++EL+A+D + A+A SLVIA+
Sbjct: 169 VKWIEGKIGAKPSVTSSILIGKQPKEVLDAYKKILGDFNNWELSAVDQLTASARSLVIAL 228

Query: 275 GIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVF 325
            I  G+L +E+A++ IR++ED Q+ KWGLVEGGHDIDI+DLRV+I++A++F
Sbjct: 229 AIIDGRLDVEKAMKAIRVDEDFQIAKWGLVEGGHDIDISDLRVRITAASIF 279


>gi|302796769|ref|XP_002980146.1| hypothetical protein SELMODRAFT_111970 [Selaginella moellendorffii]
 gi|300152373|gb|EFJ19016.1| hypothetical protein SELMODRAFT_111970 [Selaginella moellendorffii]
          Length = 285

 Score =  236 bits (603), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 114/231 (49%), Positives = 163/231 (70%), Gaps = 5/231 (2%)

Query: 95  RFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRPF 154
           RFY+    R +DDG+ + VMLD  TLKTP K P+ +PT GLA AI AEW++Q   GIRPF
Sbjct: 54  RFYKHARMRPSDDGH-YVVMLDRFTLKTPKKNPVSVPTPGLALAIAAEWEWQTKSGIRPF 112

Query: 155 MMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDPL 214
            MPLMKLA T ++R+P  R  +IE+L+K  + D V+CRAP    L+     +Q Q+ DPL
Sbjct: 113 TMPLMKLAATTIDRLPDFRENVIENLLKYSHADSVYCRAPETEPLS----HKQAQQWDPL 168

Query: 215 LKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAI 274
           +KW+E + G KP V SS   GKQ   ++   + ++   +++EL+A+D + A+A SLVIA+
Sbjct: 169 VKWIEGKIGAKPSVTSSILIGKQPKEVLDAYKKILGDFNNWELSAVDQLTASARSLVIAL 228

Query: 275 GIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVF 325
            I  G+L +E+A++ IR++ED Q+ KWGLVEGGHDIDI+DLRV+I++A++F
Sbjct: 229 AIIDGRLDVEKAMKAIRVDEDFQIAKWGLVEGGHDIDISDLRVRITAASIF 279


>gi|168061768|ref|XP_001782858.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162665636|gb|EDQ52313.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 242

 Score =  234 bits (596), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 119/247 (48%), Positives = 177/247 (71%), Gaps = 6/247 (2%)

Query: 82  MPMSFMTGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGA 141
           MP    +G++ G+RFY+K  T+ A+DG+G+ VMLD R LKTP+++PLK+P   LA AI A
Sbjct: 1   MPRLSSSGTM-GRRFYKKTHTKPAEDGSGYIVMLDGRELKTPARKPLKVPNAALALAIAA 59

Query: 142 EWDYQQTDGIRPFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTS 201
           EW++QQ+ GIRP+ MP+MKLA T+++++P  R ++I  L+K F+ D +  RA    + T 
Sbjct: 60  EWEWQQS-GIRPYTMPMMKLAATSIDQIPRDRERVIHTLLKYFHTDSLCLRA----EDTD 114

Query: 202 GVHERQVQKIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAID 261
            V E+Q    DPL+ W E E G +P V SS FG  Q   +++ +E ++ ++ D++LAAID
Sbjct: 115 PVAEKQSAVWDPLIDWAEQEIGERPAVTSSIFGTTQPSHVLEAMEKVLMQSSDWQLAAID 174

Query: 262 AIAAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISS 321
            +A  A SL++A+ I RG+L IEEA+E+IRLEE+ QV++WG VEGGHDID AD+RV+I++
Sbjct: 175 WLAGTARSLIVALAIARGRLGIEEAMEVIRLEENHQVEEWGYVEGGHDIDEADMRVKIAA 234

Query: 322 ATVFLGL 328
            +VF+ L
Sbjct: 235 CSVFMRL 241


>gi|294461813|gb|ADE76465.1| unknown [Picea sitchensis]
          Length = 195

 Score =  224 bits (570), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 111/176 (63%), Positives = 140/176 (79%)

Query: 156 MPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDPLL 215
           MPLMKL+CTALER PL R + IE+L++  + DLVFCRAP D+DLTS VH+ QV+ +DPL 
Sbjct: 1   MPLMKLSCTALERAPLIRERTIENLLRHIHTDLVFCRAPGDSDLTSHVHDLQVEFMDPLF 60

Query: 216 KWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIG 275
            W+E+E G +P++Y+S F GKQ   L+  +E  +KKTD++EL AIDAI AAA S+ IA  
Sbjct: 61  DWMEAELGVRPMLYTSIFAGKQPQELVNAMECFLKKTDNWELTAIDAITAAAKSITIAFA 120

Query: 276 IFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGLSRR 331
           +FRG+L +EEAI+LIRLEEDLQVDKWGLVEGGHD+D+ADLRV ISSA  FLG + R
Sbjct: 121 VFRGRLDVEEAIKLIRLEEDLQVDKWGLVEGGHDVDMADLRVHISSAVAFLGEAPR 176


>gi|307106081|gb|EFN54328.1| hypothetical protein CHLNCDRAFT_135562 [Chlorella variabilis]
          Length = 284

 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 96/238 (40%), Positives = 140/238 (58%), Gaps = 9/238 (3%)

Query: 95  RFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRPF 154
           RFY+ V  R+A D  G+ VMLD+R L+TP++ PL LP+  LA AI AEW++Q    I+PF
Sbjct: 52  RFYKTVHIRDALDQGGYQVMLDHRVLRTPARHPLVLPSRALALAIAAEWEWQ-IKRIQPF 110

Query: 155 MMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQK--ID 212
            MPLM LA TAL+  P  R +++  +++    D V CR     D    V +RQ Q     
Sbjct: 111 TMPLMSLAATALDE-PKPRDEVVATMLQYLPTDSVLCR-----DEAGLVADRQAQARVYA 164

Query: 213 PLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVI 272
           P+L W + + G +     S FG       +  VE  ++  D + LAA + +AA   S+++
Sbjct: 165 PILAWAQQQMGVRVEPTDSIFGASLGQEELGGVEAHLQGLDRWHLAAAEQLAAYCKSVLL 224

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGLSR 330
            +      L IE+ +   RLEED Q+++WGLVEGGHDIDIADLRV++++  +F+ L R
Sbjct: 225 GLAATAQALSIEQVLAAARLEEDHQIERWGLVEGGHDIDIADLRVRVAAPCLFVRLLR 282


>gi|308812219|ref|XP_003083417.1| F1-ATP synthase assembly protein (ISS) [Ostreococcus tauri]
 gi|116055297|emb|CAL57693.1| F1-ATP synthase assembly protein (ISS) [Ostreococcus tauri]
          Length = 330

 Score =  170 bits (431), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 102/268 (38%), Positives = 146/268 (54%), Gaps = 14/268 (5%)

Query: 67  GRKQETASSSSSSVTMPMSFMTGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKR 126
           G K   ASS   S TM            +FYE+VS R  D    W V LD R L+TP + 
Sbjct: 73  GTKIGEASSERVSATM-----RADGTAPKFYEEVSVRRDDASGTWRVTLDERLLRTPRRN 127

Query: 127 PLKLPTLGLAKAIGAEWDYQQTDGIRPFMMPLMKLACTALERV--PLTRPKIIEHLMKKF 184
                T  LA AI  EWD  QTD + PF MPL +L+ TAL+ +    TR   +E L+K F
Sbjct: 128 EYTFGTKALAVAIAMEWD-AQTDHVAPFTMPLTQLSATALDHMWERETRELHVETLLKHF 186

Query: 185 NQDLVFCRAPADNDLTSGVHERQVQKIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKT 244
             D+V  R+     +   V +RQV+   P+LKW E EFG +  V  S FG +  D  ++ 
Sbjct: 187 RTDVVRVRS-----MDEAVAKRQVETHAPILKWAEKEFG-EVEVSDSIFGPETSDKTLEV 240

Query: 245 VENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLV 304
           +   +     +EL    A++AA  SL+I +   RG+L ++EAI   R+EE+ Q+++WGLV
Sbjct: 241 LRKRLNAMCPWELTCAFALSAATKSLLIGLKTLRGELSVDEAIAAARVEEETQIEEWGLV 300

Query: 305 EGGHDIDIADLRVQISSATVFLGLSRRN 332
           EGGHD+D  D+RV++++  + + L   N
Sbjct: 301 EGGHDLDQLDIRVKVAAPVMLMKLRADN 328


>gi|255082692|ref|XP_002504332.1| predicted protein [Micromonas sp. RCC299]
 gi|226519600|gb|ACO65590.1| predicted protein [Micromonas sp. RCC299]
          Length = 244

 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 90/248 (36%), Positives = 138/248 (55%), Gaps = 11/248 (4%)

Query: 87  MTGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQ 146
           M G     RFY+KV     ++G GW V LD R LKTP +  L +P+  LA AI AEW++Q
Sbjct: 1   MRGDGTAPRFYKKVEVVRVENGGGWGVALDGRALKTPKRAALAVPSKSLAMAIAAEWEWQ 60

Query: 147 QTDGIRPFMMPLMKLACTALERVPLTRPKI----IEHLMKKFNQDLVFCRAPADNDLTSG 202
               IRPF MPLM L  T++++  +T+ ++    +  L++ F  D+V  +          
Sbjct: 61  SGRSIRPFTMPLMALVATSIDQ--MTQEEVRDFHVRKLLEFFPTDVVLIKHEPGK----- 113

Query: 203 VHERQVQKIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDA 262
           + +RQ +   P+LKW  SE G       S +G +  +  +   E  ++  D +EL A   
Sbjct: 114 LADRQAEIHAPILKWARSELGPGVEPTESLYGAQIPEEAMAAAEKRLRAMDPFELTATFN 173

Query: 263 IAAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSA 322
            AA+A SL+  + + RG + +E+A    R+EED Q+D+WGLVEGGHDID AD+ V++++ 
Sbjct: 174 AAASAKSLLTGMALIRGAIDVEQAEMSARVEEDFQIDEWGLVEGGHDIDKADIAVRLAAP 233

Query: 323 TVFLGLSR 330
              + L R
Sbjct: 234 RALMSLLR 241


>gi|145354504|ref|XP_001421523.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144581760|gb|ABO99816.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 245

 Score =  166 bits (419), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 96/240 (40%), Positives = 140/240 (58%), Gaps = 12/240 (5%)

Query: 95  RFYEKVSTREADDGNG-WTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           RFYE+V  RE D  +G W V LD R L+TP +      T GLA+A+ AEWD  Q + I P
Sbjct: 9   RFYERVDARERDARDGTWRVELDARALRTPKRNEYAFATEGLARAVAAEWD-AQGERIAP 67

Query: 154 FMMPLMKLACTALERV--PLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKI 211
           F MPL  L+ TA++ +    TR   +E L+K F  D    R+P  ++ T+    RQ +  
Sbjct: 68  FTMPLTSLSATAIDHMGDAETRRVHVETLLKYFGTDATRVRSP--DEATAA---RQAKAH 122

Query: 212 DPLLKWVESEFGFKPVVYS-SFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSL 270
           DP++ W E EFG  PV  S S FG    +  ++ +   +     +EL    A++AA  SL
Sbjct: 123 DPIVAWAEREFG--PVETSDSIFGPGTSEKTVEVLRRRLHAMCPWELTCAFALSAATKSL 180

Query: 271 VIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGLSR 330
           +I++   RG L ++EAI   R+EE+ Q+++WGLVEGGHD+D  D+RV++S+  V + L R
Sbjct: 181 LISLKTLRGGLTVDEAIAAARVEEEAQIEEWGLVEGGHDLDQLDIRVKVSAPVVLMKLRR 240


>gi|303288920|ref|XP_003063748.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226454816|gb|EEH52121.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 334

 Score =  164 bits (416), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 96/267 (35%), Positives = 140/267 (52%), Gaps = 11/267 (4%)

Query: 67  GRKQETASSSSSSVTMPMSFMTGSIVGKRFYEKVSTREADDGNG-WTVMLDYRTLKTPSK 125
           G +   A +SS  V    + + G     RFY+ VS     D  G W + LD +TLKTPSK
Sbjct: 73  GGENRHAEASSDRVG---AGLRGDGTAPRFYKSVSVVPQKDAPGLWGIALDGKTLKTPSK 129

Query: 126 RPLKLPTLGLAKAIGAEWDYQQTDGIRPFMMPLMKLACTALERV--PLTRPKIIEHLMKK 183
            PL +P+  LA A+ AEW++Q    IRPF MPLM L  TA++++  P  R + I  L++ 
Sbjct: 130 APLAVPSKALALAVAAEWEWQSGKSIRPFTMPLMALVATAMDQMSKPAIRAQHIHTLLEF 189

Query: 184 FNQDLVFCRAPADNDLTSGVHERQVQKIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIK 243
           F  D+V CR        S + + Q    +P+L+W   E G      S F      + + +
Sbjct: 190 FPTDVVLCR-----HEPSPLADYQAIAHEPVLRWARKELGDVTPTESIFGAEDIPEEVTR 244

Query: 244 TVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGL 303
                +   D +EL A     A+A SL+I + + RG + +EEA    R EED Q ++WGL
Sbjct: 245 AASKRLDAMDAFELTATFNACASAKSLLIGLALVRGAITVEEATRAARAEEDFQTEEWGL 304

Query: 304 VEGGHDIDIADLRVQISSATVFLGLSR 330
           VEGGHD+D AD+ V++ +    + L R
Sbjct: 305 VEGGHDVDAADVSVRLRAPRAMMSLLR 331


>gi|384248226|gb|EIE21711.1| ATP12-domain-containing protein, partial [Coccomyxa subellipsoidea
           C-169]
          Length = 275

 Score =  158 bits (400), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 79/239 (33%), Positives = 134/239 (56%), Gaps = 8/239 (3%)

Query: 90  SIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTD 149
           ++   R+   ++ +E   G    ++ D + L+TP++ PL LP   LA A+ AEW +Q   
Sbjct: 44  TVAASRWQGHITVQETTGGC--MILFDGKALRTPARFPLILPNRALALAVAAEWQWQDDM 101

Query: 150 GIRPFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQ 209
            IRPF MPLM LA TA+++ P  R  ++  L+   + D   CR     D    +  RQ Q
Sbjct: 102 KIRPFTMPLMSLAATAIDQ-PKHRNLVVNTLLTYLHADSACCR-----DAPGPLSARQAQ 155

Query: 210 KIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHS 269
             DP+++W       +  +  S FG +Q +  I+ V   ++    ++LAA + +     S
Sbjct: 156 VYDPIVEWASKALQTEITISDSIFGSEQPEEAIEAVRCYLEGLSAWQLAATERLIGTCRS 215

Query: 270 LVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGL 328
           L++ + +  G L + +A++  RLEE+ Q+D+WGLVEGGHD+D A+ +VQ+++ ++FL L
Sbjct: 216 LLVGLAVSEGHLDLTQALQAARLEEEFQIDRWGLVEGGHDVDQANAKVQLAAPSLFLRL 274


>gi|159478324|ref|XP_001697254.1| assembly factor 2 for F1 mitochondrial ATP synthase, splice variant
           a [Chlamydomonas reinhardtii]
 gi|158274728|gb|EDP00509.1| assembly factor 2 for F1 mitochondrial ATP synthase, splice variant
           a [Chlamydomonas reinhardtii]
          Length = 276

 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 82/266 (30%), Positives = 143/266 (53%), Gaps = 17/266 (6%)

Query: 63  IYIKGRKQETASSSSSSVTMPMSFMTGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKT 122
           +++ G ++  A +S+S+ T  +S         RFY+      A+D +G+ VMLD + ++T
Sbjct: 24  LFVGGVRE--AHTSASNTTSKIS---------RFYKAAHVVPAEDRSGFQVMLDRKPVRT 72

Query: 123 PSKRPLKLPTLGLAKAIGAEWDYQQTDGIRPFMMPLMKLACTALERVPLTRPKIIEHLMK 182
           P K+   LP+  LA A+ AEW++Q+    +   MP+M L   AL++ P  R K+I H+M 
Sbjct: 73  PGKKLAVLPSHPLALAVAAEWEWQEKGKPQLHTMPMMSLVAHALDQ-PRPRDKVIAHIMN 131

Query: 183 KFNQDLVFCRAPADNDLTSGVHERQVQKIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLI 242
             + D   C           +  RQ +   P+L+ +  + G++ ++  +  G  Q D L+
Sbjct: 132 YVHTDAACCLYERGT-----LARRQQEVFGPILEALRQDAGWRFLMSDNIAGSHQTDELV 186

Query: 243 KTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           + V   +   DD+ LAA++ +     S+VI   + RG +   +A+   R+EED Q ++WG
Sbjct: 187 EGVRAWLAGLDDWHLAAMEQLTGTTKSVVIPAALLRGHITPAQALAAARVEEDFQAEEWG 246

Query: 303 LVEGGHDIDIADLRVQISSATVFLGL 328
            VE GHD+D ADLR ++   ++F+ L
Sbjct: 247 RVEAGHDLDEADLRSRVFGPSLFVRL 272


>gi|325180260|emb|CCA14663.1| conserved hypothetical protein [Albugo laibachii Nc14]
          Length = 269

 Score =  139 bits (351), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 89/242 (36%), Positives = 133/242 (54%), Gaps = 12/242 (4%)

Query: 95  RFYEKVSTREA-DDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           RFY +VS  E   D   + V LD R +KT  K P +LP   LA A+  EWD Q+ + IRP
Sbjct: 34  RFYNRVSVVEMRSDAPAYGVALDGRNIKTSLKSPFQLPYKALAYAVAHEWDAQK-NIIRP 92

Query: 154 FMMPLMKLACTALERVPLT--RPKIIEHLMKKFNQDLVFCR--APADNDLTSGVHERQVQ 209
             MPLM LA T ++ +PLT  R ++I+  M  F Q    C   +P   D    +H  Q++
Sbjct: 93  ATMPLMTLASTIID-LPLTSSRHELIDD-MTNFLQSDTICYQVSPTPQD---KLHSLQLE 147

Query: 210 KIDPLLKWVESEF-GFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAH 268
           K +P+ KW   +F G   V + +      +  L++ V   ++K  ++EL  + AI     
Sbjct: 148 KWEPIRKWFSEKFNGELDVSHGTINALVHDKALVQNVRMYLEKLSNFELVPLRAITKNCK 207

Query: 269 SLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGL 328
           S + A  +F   +  ++A++  RLEE+ Q+D WGLVEGGHD+D  +  V ISSA++FL L
Sbjct: 208 SFITASALFDRHITAKDAMDNSRLEEEFQIDGWGLVEGGHDLDRVNCSVGISSASLFLWL 267

Query: 329 SR 330
            +
Sbjct: 268 QQ 269


>gi|298707299|emb|CBJ25926.1| similar to ATP synthase mitochondrial F1 complex assembly factor 2
           [Ectocarpus siliculosus]
          Length = 350

 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 83/238 (34%), Positives = 119/238 (50%), Gaps = 21/238 (8%)

Query: 95  RFYEKVSTRE----------------ADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKA 138
           RFY+ V+ RE                 D    W ++LD R LKTP +RPL+  +  LA A
Sbjct: 92  RFYKTVTIREIVADKAGDEASAAAAVGDKSPRWEILLDSRVLKTPGRRPLQFDSPELAMA 151

Query: 139 IGAEWDYQQTD-GIRPFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADN 197
           + AEWD Q T  GI P +MPLM LA TAL++V   R K +   +K    D V   +P   
Sbjct: 152 VAAEWDAQDTSKGIEPAVMPLMALASTALDQVASDREKTVATCLKYLPTDTVCFLSP--- 208

Query: 198 DLTSGVHERQVQKIDPLLKWVESEFGFKPVVYSSFFGGKQEDG-LIKTVENLMKKTDDYE 256
           D    +  RQ Q   PL  W E   G      +      Q     +    +L++  D++ 
Sbjct: 209 DPDPVIARRQRQLWSPLRDWTEEALGIPVATTTEIHRTPQHPPEALARARDLLESLDEWG 268

Query: 257 LAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIAD 314
           LAA+ +      SLVIA+ +   K  +E+A +  RLEE+  V++WG++EGGHD+D A+
Sbjct: 269 LAAVQSATMECKSLVIALALLFRKTTVEKAFDAARLEEEYNVERWGMIEGGHDMDRAN 326


>gi|412988621|emb|CCO17957.1| ATP12 ATPase [Bathycoccus prasinos]
          Length = 421

 Score =  128 bits (322), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 82/231 (35%), Positives = 132/231 (57%), Gaps = 8/231 (3%)

Query: 95  RFYEKVSTRE-ADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           ++YE V  RE +   N + ++LD + LK+P +    LP   LA AI  EW  Q+ D IRP
Sbjct: 170 KYYENVDIREVSSTQNQYEILLDGKPLKSPKRAQFILPNKLLASAIATEWATQEDDLIRP 229

Query: 154 FMMPLMKLACTALERVP--LTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKI 211
           F MPLM+L+ TAL+ +    T    ++ L++ F+ D      P+ ++L     E Q++ +
Sbjct: 230 FTMPLMQLSSTALDHMSDYATFDFHVKKLLEFFDADQAVVAHPSGSEL----REIQLKTL 285

Query: 212 DPLLKWVESEFGFKPVVYS-SFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSL 270
             +  W   EFG +  + S S F   Q + +   +E  ++    +E+    A AAAA SL
Sbjct: 286 KKVHDWARREFGEQLNLSSDSIFAQPQPEEVKLLMEKRLRSLSPWEMTCTFAAAAAAKSL 345

Query: 271 VIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISS 321
           +I + + R  +  EEA++  R+EED Q+++ G VEGGHDIDI+DLRV++++
Sbjct: 346 LIGLALNRNIIDPEEALKCARVEEDYQIERHGFVEGGHDIDISDLRVRLTA 396


>gi|83593988|ref|YP_427740.1| ATP12 ATPase [Rhodospirillum rubrum ATCC 11170]
 gi|386350740|ref|YP_006048988.1| ATP12 ATPase [Rhodospirillum rubrum F11]
 gi|83576902|gb|ABC23453.1| ATP12 ATPase [Rhodospirillum rubrum ATCC 11170]
 gi|346719176|gb|AEO49191.1| ATP12 ATPase [Rhodospirillum rubrum F11]
          Length = 257

 Score =  128 bits (321), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 74/209 (35%), Positives = 116/209 (55%), Gaps = 7/209 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           +RFY   +   A+   G+T++LD + + TP KRPL +PT GLA+A+  EW   Q + I P
Sbjct: 27  RRFYTTATVGAAE--GGFTLLLDGKAVHTPGKRPLVVPTKGLAEAMAGEW-AGQGETIEP 83

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MPL +LA TA++R+   RP + E L++    DL+  RA    +L     ERQ +   P
Sbjct: 84  DSMPLTQLANTAIDRMAAARPALEEDLLRYGGSDLLCYRAERPRELV----ERQHRAWQP 139

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
            L W+ +  G   VV S      Q +  ++ +  L++  DD+ L A+ A  AA  SLV+A
Sbjct: 140 ALDWLAAHAGADLVVTSGLMPIDQPETALEALGRLVRAYDDWTLTAVQAATAACGSLVLA 199

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           + +  G++  EEA  L  L++  Q+++WG
Sbjct: 200 LALIEGRISAEEAFTLAFLDDSYQMEQWG 228


>gi|320163158|gb|EFW40057.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 302

 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 75/243 (30%), Positives = 119/243 (48%), Gaps = 9/243 (3%)

Query: 94  KRFYEKVST---READDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDG 150
           KRFY  V+           G+ + LD R L+TP++  L LPT  LA  +  EWD Q+   
Sbjct: 61  KRFYRSVTVSAAPATAPAPGFVIKLDDRQLRTPARSLLVLPTKALAVGVAGEWDSQRPT- 119

Query: 151 IRPFMMPLMKLACTALE-RVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQ 209
           I+P +MPL  L+ TA +      R + +E L++    D V CR P      +   E Q  
Sbjct: 120 IKPHLMPLTALSNTATDPHRQRDRNQRVEDLLRFLATDTVCCRTPD----PAAFQEMQST 175

Query: 210 KIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHS 269
             DPL+ W    FG +  V    FGG   +     + +++K  +++    ++     A S
Sbjct: 176 HWDPLVHWFTKRFGVELNVSEDLFGGVHPEATTDRMRDVLKNMNEWTFTGLETATLTAKS 235

Query: 270 LVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGLS 329
           +VIA  +  G +   +A     LEE+ Q ++WG VE GH +  AD R+ +++A +F+ L+
Sbjct: 236 MVIAAALGGGYIDANQATICAHLEEEFQTERWGKVEWGHGMRHADTRMTLAAAGLFMRLA 295

Query: 330 RRN 332
             N
Sbjct: 296 TEN 298


>gi|146278538|ref|YP_001168697.1| ATP12 ATPase [Rhodobacter sphaeroides ATCC 17025]
 gi|145556779|gb|ABP71392.1| ATP12 ATPase [Rhodobacter sphaeroides ATCC 17025]
          Length = 235

 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 78/213 (36%), Positives = 119/213 (55%), Gaps = 11/213 (5%)

Query: 92  VGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGI 151
           V KRF++ VS   A+D  G+ V+LD R L+TP+KRPL LPT  LA+A+  EW  Q+ + +
Sbjct: 5   VAKRFWKGVSV--AEDAGGFAVLLDGRALRTPAKRPLILPTGPLAEAVADEWRAQEGE-V 61

Query: 152 RPFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKI 211
           RP  MP  + A +AL++V     ++   L      DL+  RAPA   LT+    RQ +  
Sbjct: 62  RPGTMPFTRSANSALDKVEPQFDEVAGMLAAYGGTDLLCYRAPAPAALTA----RQAEAW 117

Query: 212 DPLLKWVESEFG--FKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHS 269
           DP+L W    FG   +P V        Q +  ++ +   +     +++AA   + A ++S
Sbjct: 118 DPILAWAAEAFGAPLEPTV--GVMHRPQPEESLRRLAERVGALSPFQVAAFHDLVAISNS 175

Query: 270 LVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           LV+A G+  G+L  EEA EL R++E  QV++WG
Sbjct: 176 LVLAFGVTEGRLLAEEAWELSRIDETWQVEQWG 208


>gi|332261715|ref|XP_003279913.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor 2
           [Nomascus leucogenys]
          Length = 289

 Score =  124 bits (312), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 75/237 (31%), Positives = 127/237 (53%), Gaps = 10/237 (4%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+ VS  + +   G+ + LD+R LKTP  + L +P+  LA A+  EWD QQ D I+ 
Sbjct: 47  KRFYQNVSITQGE--GGFEINLDHRKLKTPQAKLLTIPSEALAIAVATEWDSQQ-DTIKY 103

Query: 154 FMMPLMKLACTALERVPLTRPK--IIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKI 211
           + M L  L  T+L+  P  R K  +I   +K  + D +  R      L     E Q  + 
Sbjct: 104 YTMHLTTLCNTSLDN-PTQRNKDQLIRAAVKFLDTDTICYRVEEPETLV----ELQSNEW 158

Query: 212 DPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLV 271
           DP+++W E  +G +    +S  G        + + + +   + + L  I+ +AA   S+V
Sbjct: 159 DPIIEWAEKRYGVEISSSTSIMGPSIPPETREVLVSHLASYNTWALQGIEFVAAQLKSMV 218

Query: 272 IAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGL 328
           + +G+   +L +E+A+ L RLEE+ Q+ KWG +E  HD ++ +LR + ++ T+F+ L
Sbjct: 219 LTLGLIDLRLTVEQAVLLSRLEEEYQIQKWGNIEWAHDYELQELRARTAAGTLFIHL 275


>gi|392382039|ref|YP_005031236.1| conserved protein of unknown function [Azospirillum brasilense
           Sp245]
 gi|356877004|emb|CCC97805.1| conserved protein of unknown function [Azospirillum brasilense
           Sp245]
          Length = 232

 Score =  124 bits (312), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 80/241 (33%), Positives = 125/241 (51%), Gaps = 15/241 (6%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+  S  EA  G G+ V LD R +++P+K PL   +  LA+A+ AEWD Q  D I P
Sbjct: 2   KRFYKTASVDEAA-GGGFEVRLDNRPIRSPAKAPLVFASWPLAQAVAAEWDAQPED-IAP 59

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MPLM+LA TA++ +   R  I++ +      DL+  RA    +L     ERQ Q+  P
Sbjct: 60  DSMPLMQLASTAVDLIGKGRAAIVDGVAAYAETDLLCYRAEHPRNLV----ERQAQRWQP 115

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           LL W    +     V +      Q    ++ + N ++  DD+ L+A+     +  SL++A
Sbjct: 116 LLDWATLRYDAPLHVNAGLMPKPQPPEALRALRNAVEAYDDWTLSALQTATGSCGSLIVA 175

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDI----ADLRVQISSATVFLGLS 329
           + +  G++  EEA E+ +L+E  Q++ W     G D +     A LRV I++   F+ L 
Sbjct: 176 LALVEGRIDAEEAFEVSQLDETFQIEAW-----GEDPEATKRRAALRVDIAACRRFVDLL 230

Query: 330 R 330
           R
Sbjct: 231 R 231


>gi|297700220|ref|XP_002827155.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor 2
           [Pongo abelii]
          Length = 289

 Score =  124 bits (311), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 75/237 (31%), Positives = 126/237 (53%), Gaps = 10/237 (4%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+ VS  + +   G+ + LD+R LKTP  +   +P+  LA A+  EWD QQ D I+ 
Sbjct: 47  KRFYQNVSITQGE--GGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWDSQQ-DTIKY 103

Query: 154 FMMPLMKLACTALERVPLTRPK--IIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKI 211
           + M L  L  T+L+  P  R K  +I   +K  + D +  R      L     E Q  + 
Sbjct: 104 YTMHLTTLCNTSLDN-PTQRNKDQLIRAAVKFLDTDTICYRVEEPETLV----ELQRNEW 158

Query: 212 DPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLV 271
           DP++KW E  +G +    +S  G        + + + +   + + L  I+ +AA   S+V
Sbjct: 159 DPIIKWAEKRYGVEISSSTSIMGPSIPAKTREVLVSHLASYNTWALQGIEFVAAQLKSMV 218

Query: 272 IAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGL 328
           + +G+   +L +E+A+ L RLEE+ Q+ KWG +E  HD ++ +LR + ++ T+F+ L
Sbjct: 219 LTLGLIDLRLTVEQAVLLSRLEEEYQIQKWGNIEWAHDYELQELRARTAAGTLFIHL 275


>gi|209963756|ref|YP_002296671.1| hypothetical protein RC1_0419 [Rhodospirillum centenum SW]
 gi|209957222|gb|ACI97858.1| conserved hypothetical protein [Rhodospirillum centenum SW]
          Length = 231

 Score =  124 bits (311), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 70/210 (33%), Positives = 112/210 (53%), Gaps = 7/210 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KR Y +V T   +   GW V LD R+LK+P++ PL LPT  LA+A+ AEWD  QT+ + P
Sbjct: 2   KRVYREVGTAAVE--GGWEVRLDGRSLKSPARAPLVLPTRALAEAVAAEWD-AQTETVEP 58

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP+M+LA T ++R+   R  I++ +      DL+  RA     L +    RQ +   P
Sbjct: 59  HSMPMMQLASTTVDRIVPQRAAIVDGVAAYAGTDLLCYRADHPRSLVA----RQEEAWQP 114

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           LL WV S +    +  +      Q D  +  +   ++  DD+ L+ +    A + SLV+A
Sbjct: 115 LLDWVASRYDAMLLPTTGIVHRPQSDLTLAALRRAVEAQDDWRLSGLQNAVALSGSLVVA 174

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWGL 303
           + +  G++  EEA  + +L+E  Q + WG+
Sbjct: 175 LALLEGRIDAEEAFAVSQLDESWQSETWGV 204


>gi|313105488|gb|ADR32103.1| ATP synthase [Hydractinia symbiolongicarpus]
          Length = 265

 Score =  124 bits (310), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 75/248 (30%), Positives = 130/248 (52%), Gaps = 10/248 (4%)

Query: 84  MSFMTGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEW 143
           MS++  + +  RFY+ V      D NG+ + LD RT+KTP    L +PT  LA A+  EW
Sbjct: 19  MSYLKANKI--RFYKNVDIHP--DKNGYLIQLDNRTIKTPLLNQLCVPTKRLAVAVANEW 74

Query: 144 DYQQTDGIRPFMMPLMKLACTALER-VPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSG 202
            + QT+ I    MPL  +  TA++    +T+ ++++ ++  F+ + +   A     L   
Sbjct: 75  -FMQTEVIDQHNMPLTAICNTAIDNPTNITQEELVDEILNFFHTETICALAEEPEALMW- 132

Query: 203 VHERQVQKIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDA 262
               Q +K  P+ +W   +F  +    S  FG  Q D  I T++N + K + ++L  + A
Sbjct: 133 ---LQKEKWTPIHEWFSRKFNVEVNASSDLFGLYQPDHTISTMKNFLMKLNRWQLCGVQA 189

Query: 263 IAAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSA 322
              +  S ++ + +    + IEEA+ L RLE + Q++KWG VE  HDIDI + +  +++A
Sbjct: 190 AVDSIKSFILPLCVIEKHISIEEALYLSRLELEFQIEKWGNVEYAHDIDIYNQQSLLTTA 249

Query: 323 TVFLGLSR 330
            +   LS+
Sbjct: 250 VLVFHLSQ 257


>gi|164609122|gb|ABY62782.1| ATP synthase mitochondrial F1 complex assembly factor-like protein
           [Hydractinia symbiolongicarpus]
          Length = 265

 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 75/248 (30%), Positives = 132/248 (53%), Gaps = 10/248 (4%)

Query: 84  MSFMTGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEW 143
           MS++  + +  RFY+ V      D NG+ + LD RT+KTP    L +PT  LA A+  EW
Sbjct: 19  MSYLKANKI--RFYKNVDIHP--DKNGYLIQLDNRTIKTPLLNQLCVPTKRLAVAVANEW 74

Query: 144 DYQQTDGIRPFMMPLMKLACTALER-VPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSG 202
            + QT+ I    MPL  +  TA++    +T+ ++++ ++  F+ D + C   A  +    
Sbjct: 75  -FMQTEVIDQHNMPLTAICNTAIDNPTNITQEELVDEILNFFHTDTI-C---ALTEEPEA 129

Query: 203 VHERQVQKIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDA 262
           +   Q +K  P+ +W   +F  +    S  FG  Q D  I T++N + K + ++L  + A
Sbjct: 130 LMWLQKEKWTPIHEWFSKKFNVEVNASSDLFGLYQPDHTISTMKNFLMKLNRWQLCGVQA 189

Query: 263 IAAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSA 322
              +  S ++ + + +  + IEEA+ L RLE + Q++KWG VE  HDID  + +  +++A
Sbjct: 190 AVDSIKSFILPLCVIKKHISIEEALYLSRLELEFQIEKWGNVEYAHDIDRYNQQSLLTTA 249

Query: 323 TVFLGLSR 330
            +   LS+
Sbjct: 250 VLVFHLSQ 257


>gi|114668880|ref|XP_001159122.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor 2
           isoform 2 [Pan troglodytes]
 gi|410209666|gb|JAA02052.1| ATP synthase mitochondrial F1 complex assembly factor 2 [Pan
           troglodytes]
 gi|410258268|gb|JAA17101.1| ATP synthase mitochondrial F1 complex assembly factor 2 [Pan
           troglodytes]
 gi|410290454|gb|JAA23827.1| ATP synthase mitochondrial F1 complex assembly factor 2 [Pan
           troglodytes]
 gi|410351925|gb|JAA42566.1| ATP synthase mitochondrial F1 complex assembly factor 2 [Pan
           troglodytes]
          Length = 289

 Score =  123 bits (308), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 126/237 (53%), Gaps = 10/237 (4%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+ VS  + +   G+ + LD+R LKTP  +   +P+  LA A+  EWD QQ D I+ 
Sbjct: 47  KRFYQNVSITQGE--GGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWDSQQ-DTIKY 103

Query: 154 FMMPLMKLACTALERVPLTRPK--IIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKI 211
           + M L  L  T+L+  P  R K  +I   +K  + D +  R      L     E Q  + 
Sbjct: 104 YTMHLTTLCNTSLDN-PTQRNKDQLIRAAVKFLDTDTICYRVEEPETLV----ELQRNEW 158

Query: 212 DPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLV 271
           DP+++W E  +G +    +S  G        + + + +   + + L  I+ +AA   S+V
Sbjct: 159 DPIIEWAEKRYGVEISSSTSIMGPSIPAKTREVLVSHLASYNTWALQGIEFVAAQLKSMV 218

Query: 272 IAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGL 328
           + +G+   +L +E+A+ L RLEE+ Q+ KWG +E  HD ++ +LR + ++ T+F+ L
Sbjct: 219 LTLGLIDMRLTVEQAVLLSRLEEEYQIQKWGNIEWAHDYELQELRARTAAGTLFIHL 275


>gi|397474779|ref|XP_003808838.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor 2
           [Pan paniscus]
          Length = 289

 Score =  123 bits (308), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 126/237 (53%), Gaps = 10/237 (4%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+ VS  + +   G+ + LD+R LKTP  +   +P+  LA A+  EWD QQ D I+ 
Sbjct: 47  KRFYQNVSITQGE--GGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWDSQQ-DTIKY 103

Query: 154 FMMPLMKLACTALERVPLTRPK--IIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKI 211
           + M L  L  T+L+  P  R K  +I   +K  + D +  R      L     E Q  + 
Sbjct: 104 YTMHLTTLCNTSLDN-PTQRNKDQLIRAAVKFLDTDTICYRVEEPETLV----ELQRNEW 158

Query: 212 DPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLV 271
           DP+++W E  +G +    +S  G        + + + +   + + L  I+ +AA   S+V
Sbjct: 159 DPIIEWAEKRYGVEISSSTSIMGPSIPAKTREVLVSHLASYNTWALQGIEFVAAQLKSMV 218

Query: 272 IAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGL 328
           + +G+   +L +E+A+ L RLEE+ Q+ KWG +E  HD ++ +LR + ++ T+F+ L
Sbjct: 219 LTLGLIDMRLTVEQAVLLSRLEEEYQIQKWGNIEWAHDYELQELRARTAAGTLFIHL 275


>gi|21735485|ref|NP_663729.1| ATP synthase mitochondrial F1 complex assembly factor 2 [Homo
           sapiens]
 gi|73917623|sp|Q8N5M1.1|ATPF2_HUMAN RecName: Full=ATP synthase mitochondrial F1 complex assembly factor
           2; AltName: Full=ATP12 homolog; Flags: Precursor
 gi|21594781|gb|AAH32126.1| ATP synthase mitochondrial F1 complex assembly factor 2 [Homo
           sapiens]
 gi|33991163|gb|AAH04114.1| ATP synthase mitochondrial F1 complex assembly factor 2 [Homo
           sapiens]
 gi|117645306|emb|CAL38119.1| hypothetical protein [synthetic construct]
 gi|119576084|gb|EAW55680.1| ATP synthase mitochondrial F1 complex assembly factor 2, isoform
           CRA_e [Homo sapiens]
 gi|158261537|dbj|BAF82946.1| unnamed protein product [Homo sapiens]
 gi|261859430|dbj|BAI46237.1| ATP synthase mitochondrial F1 complex assembly factor 2 [synthetic
           construct]
          Length = 289

 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 126/237 (53%), Gaps = 10/237 (4%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+ VS  + +   G+ + LD+R LKTP  +   +P+  LA A+  EWD QQ D I+ 
Sbjct: 47  KRFYQNVSITQGE--GGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWDSQQ-DTIKY 103

Query: 154 FMMPLMKLACTALERVPLTRPK--IIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKI 211
           + M L  L  T+L+  P  R K  +I   +K  + D +  R      L     E Q  + 
Sbjct: 104 YTMHLTTLCNTSLDN-PTQRNKDQLIRAAVKFLDTDTICYRVEEPETLV----ELQRNEW 158

Query: 212 DPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLV 271
           DP+++W E  +G +    +S  G        + + + +   + + L  I+ +AA   S+V
Sbjct: 159 DPIIEWAEKRYGVEISSSTSIMGPSIPAKTREVLVSHLASYNTWALQGIEFVAAQLKSMV 218

Query: 272 IAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGL 328
           + +G+   +L +E+A+ L RLEE+ Q+ KWG +E  HD ++ +LR + ++ T+F+ L
Sbjct: 219 LTLGLIDLRLTVEQAVLLSRLEEEYQIQKWGNIEWAHDYELQELRARTAAGTLFIHL 275


>gi|407771053|ref|ZP_11118416.1| hypothetical protein TH3_16194 [Thalassospira xiamenensis M-5 = DSM
           17429]
 gi|407285942|gb|EKF11435.1| hypothetical protein TH3_16194 [Thalassospira xiamenensis M-5 = DSM
           17429]
          Length = 264

 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 73/217 (33%), Positives = 110/217 (50%), Gaps = 7/217 (3%)

Query: 86  FMTGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDY 145
            +T SI  KRFY+K      +D  GW + LD R +K+PSK    L    LA  I AEWD 
Sbjct: 26  MLTKSI--KRFYKKAEAVRDEDAQGWRIHLDGRPVKSPSKAEFVLSAEQLAHEIAAEWD- 82

Query: 146 QQTDGIRPFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHE 205
            Q + + P  MP+M+LA TA++RV   R  +I  L      DL+  RA   +DL      
Sbjct: 83  AQGEKVLPTTMPIMQLAATAIDRVRPHRFGVIAELTGFGRSDLLCYRASFPDDLV----R 138

Query: 206 RQVQKIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAA 265
           +Q +   PLL W   E G    V        QED  +  +++ ++  DDY L A+  +  
Sbjct: 139 QQAEAWQPLLDWAHHELGVLLKVTEGVMPISQEDEALLRIQDEIEALDDYYLTALHTLTT 198

Query: 266 AAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
            + S++I +   RG++  E+A E+ +L+E   ++ WG
Sbjct: 199 VSGSVIIGLATLRGRISAEQAFEVSQLDESYSIEHWG 235


>gi|403275458|ref|XP_003929460.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor 2
           [Saimiri boliviensis boliviensis]
          Length = 263

 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 127/237 (53%), Gaps = 10/237 (4%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+ VS  + +   G+ + LD+R LKTP  +   +P+  LA A+  EWD QQ D I+ 
Sbjct: 21  KRFYQNVSITQGE--GGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWDSQQ-DTIKY 77

Query: 154 FMMPLMKLACTALERVPLTRPK--IIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKI 211
           + M L  L  T+L+  P  R K  +I   +K  + D +  R      L     E Q  + 
Sbjct: 78  YTMHLTTLCNTSLDN-PTQRNKDQLIRAAVKFLDTDTICYRVEEPETLV----ELQRNEW 132

Query: 212 DPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLV 271
           DP+++W E+ +G +    +S  G        + + + +   + + L  I+ +AA   S+V
Sbjct: 133 DPIIEWAETRYGVEISSSTSIMGPSIPAKTREVLVSHLASYNTWALQGIEFVAAQLKSIV 192

Query: 272 IAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGL 328
           + +G+   +L +E+A+ L RLEE+ Q+ KWG +E  HD ++ +LR + ++ T+F+ L
Sbjct: 193 LTLGLIDLRLTVEQAVLLSRLEEEYQIQKWGNIEWAHDYELQELRARTAAGTLFVHL 249


>gi|452965913|gb|EME70930.1| F1-ATPase chaperone protein [Magnetospirillum sp. SO-1]
          Length = 237

 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 82/239 (34%), Positives = 122/239 (51%), Gaps = 16/239 (6%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY K S+ E  DG G+ ++LD + +KTP  R L +P+  LA+AI  EW  Q+ + IRP
Sbjct: 7   KRFY-KDSSVEVRDG-GFAILLDGKAVKTPGARLLCVPSPRLAEAIAGEWRGQE-EQIRP 63

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MPL +LA TAL+RV   R  I + LM     DL+  RA    DL +    RQ     P
Sbjct: 64  STMPLTQLASTALDRVGPERAHITQQLMNYAGTDLLCYRAEIPADLAA----RQGAAWQP 119

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           LL W         V  +      Q  G +  ++  ++  DD+ L  + +  AA  SL++ 
Sbjct: 120 LLDWAAQTLDAPLVTTTGLSAVAQPTGALAALQRHLESYDDWRLTGLQSATAAMGSLILG 179

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIAD----LRVQISSATVFLGL 328
           + +  G+L  E A +  + +E  Q+++W     G D + AD    L+  I +A+ FLGL
Sbjct: 180 LALAEGRLDAEAAFQASQTDETYQIEQW-----GEDWEAADRRAELKADIEAASRFLGL 233


>gi|426349212|ref|XP_004042207.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor 2
           [Gorilla gorilla gorilla]
          Length = 289

 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 126/237 (53%), Gaps = 10/237 (4%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+ VS  + +   G+ + LD+R LKTP  +   +P+  LA A+  EWD QQ D I+ 
Sbjct: 47  KRFYQNVSITQGE--GGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWDSQQ-DTIKY 103

Query: 154 FMMPLMKLACTALERVPLTRPK--IIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKI 211
           + M L  L  T+L+  P  R K  +I   +K  + D +  R      L     E Q  + 
Sbjct: 104 YTMHLTTLCNTSLDN-PTQRNKDQLIRAAVKFLDTDTICYRVEEPETLV----ELQRNEW 158

Query: 212 DPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLV 271
           DP+++W E  +G +    +S  G        + + + +   + + L  I+ +AA   S+V
Sbjct: 159 DPIIEWAEKRYGMEISSSTSIMGPSIPAKTREVLVSHLASYNTWALQGIEFVAAQLKSVV 218

Query: 272 IAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGL 328
           + +G+   +L +E+A+ L RLEE+ Q+ KWG +E  HD ++ +LR + ++ T+F+ L
Sbjct: 219 LTLGLIDLRLTVEQAVLLSRLEEEYQIQKWGNIEWAHDYELQELRARTAAGTLFIHL 275


>gi|313105484|gb|ADR32100.1| ATP synthase [Hydractinia symbiolongicarpus]
          Length = 265

 Score =  122 bits (306), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 75/248 (30%), Positives = 129/248 (52%), Gaps = 10/248 (4%)

Query: 84  MSFMTGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEW 143
           MS++  + +  RFY+ V      D NG+ + LD RT+KTP    L +PT  LA A+  EW
Sbjct: 19  MSYLKANKI--RFYKNVDIHP--DKNGYLIQLDNRTIKTPLLNQLCVPTKRLAVAVANEW 74

Query: 144 DYQQTDGIRPFMMPLMKLACTALER-VPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSG 202
            + QT+ I    MPL  +  TA++    +T+ ++++ ++  F+ D +   A     L   
Sbjct: 75  -FMQTEVIDQHNMPLTAICNTAIDNPTNITQEELVDEILNFFHTDTICALAEEPEALMW- 132

Query: 203 VHERQVQKIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDA 262
               Q +K  P+ +W   +F  +    S  FG  Q D  I T++N + K + ++L  + A
Sbjct: 133 ---LQKEKWTPIHEWFSKKFNVEVNASSDLFGLYQPDHTISTMKNFLMKLNRWQLCGVQA 189

Query: 263 IAAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSA 322
              +  S ++ + +    + IEEA+ L RLE + Q++KWG VE  HDID  + +  +++A
Sbjct: 190 AVDSIKSFILPLCVIEKHISIEEALYLSRLELEFQIEKWGNVEYAHDIDRYNQQSLLTTA 249

Query: 323 TVFLGLSR 330
            +   LS+
Sbjct: 250 ILVFHLSQ 257


>gi|46202488|ref|ZP_00208540.1| COG5387: Chaperone required for the assembly of the mitochondrial
           F1-ATPase [Magnetospirillum magnetotacticum MS-1]
          Length = 237

 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 82/239 (34%), Positives = 118/239 (49%), Gaps = 16/239 (6%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY K S+ E  DG G+ + LD + +KTP  RPL +P+  LA AI  EW  +Q + I P
Sbjct: 7   KRFY-KDSSAEPRDG-GYAIFLDGKAIKTPGGRPLSVPSARLADAIAGEW-REQGEQILP 63

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MPL +LA TAL+RV   RP I   LM     DL+  RA    DL +    RQ     P
Sbjct: 64  STMPLTQLASTALDRVGPERPHITAQLMNYAGTDLLCYRADCPADLVA----RQSAAWQP 119

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           LL W            +S     Q    +  ++  ++  D + L ++ +  AA  SL++ 
Sbjct: 120 LLDWAAQSLDAPLATTTSLTAVAQSPSSLTALQRHIETLDLWRLTSLQSATAAMGSLILG 179

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIAD----LRVQISSATVFLGL 328
           +G+  G+L  E A +  +L+E  Q++ W     G D + AD    L+  I +A  FL L
Sbjct: 180 LGLIEGRLDAEAAFQASQLDETYQIELW-----GEDWEAADRRAELKADIEAAARFLSL 233


>gi|169854007|ref|XP_001833681.1| hypothetical protein CC1G_03898 [Coprinopsis cinerea okayama7#130]
 gi|116505331|gb|EAU88226.1| hypothetical protein CC1G_03898 [Coprinopsis cinerea okayama7#130]
          Length = 289

 Score =  122 bits (305), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 86/270 (31%), Positives = 135/270 (50%), Gaps = 13/270 (4%)

Query: 64  YIKGRKQETASSSSSSVTMPMSFMT--GSIVGKRFYEKVSTREADDGNGWTVMLDYRTLK 121
           Y + R   + +S+S  V  P    T    I  KRF+++V       G+ +TV LD R LK
Sbjct: 24  YAQRRWSSSEASTSPKVDGPAQTETNKAEITMKRFWKEVGI--GKKGDDFTVTLDKRALK 81

Query: 122 TPSKRPLKLPT-LGLAKA-IGAEWDYQQTDGIRPFMMPLMKLACTALERVP--LTRPKII 177
           TPS   L LP+  GL  A I AEWD+Q+T  ++P  +P+  +   A++ +    TR ++ 
Sbjct: 82  TPSGNTLLLPSNKGLVAALIAAEWDHQET-LLKPHALPMTSIVSRAIDSLAEDSTRQEVE 140

Query: 178 EHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDPLLKWVESEFGFKPVVYSSFFGGKQ 237
           + L+     D V C    D +    +H  Q +   PL+ W  S  G +  V +S     Q
Sbjct: 141 KTLLNYLETDTV-CFFHDDPE---PLHRLQTKYWVPLIDWARSALGLEIAVSNSVLSPNQ 196

Query: 238 EDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQ 297
               I+    L++  D +ELAA++    A  SL+I + + +  L +E A     +E D Q
Sbjct: 197 PRKTIEEASKLIRALDRWELAALERATIATKSLIIGLALVKKHLTVEGAALAASVEVDSQ 256

Query: 298 VDKWGLVEGGHDIDIADLRVQISSATVFLG 327
           +++WG VE  HD+D  D+R Q+ SA + L 
Sbjct: 257 IERWGEVEDTHDVDYQDVRRQLGSAALLLS 286


>gi|296201164|ref|XP_002747923.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor 2
           [Callithrix jacchus]
          Length = 287

 Score =  122 bits (305), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 126/237 (53%), Gaps = 10/237 (4%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+ VS  + +   G+ + LD+R LKTP  +   +P+  LA A+  EWD QQ D I+ 
Sbjct: 45  KRFYQNVSITQGE--GGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWDSQQ-DTIKY 101

Query: 154 FMMPLMKLACTALERVPLTRPK--IIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKI 211
           + M L  L  T+L+  P  R K  +I   +K  + D +  R      L     E Q  + 
Sbjct: 102 YTMHLTTLCNTSLDN-PTQRNKDQLIRAAVKFLDTDTICYRVEEPETLV----ELQRNEW 156

Query: 212 DPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLV 271
           DP+++W E  +G +    +S  G        + + + +   + + L  I+ +AA   S+V
Sbjct: 157 DPIIEWAEKRYGVEISSSTSIMGPSIPAKTREVLVSHLASYNTWALQGIEFVAAQLKSMV 216

Query: 272 IAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGL 328
           + +G+   +L +E+A+ L RLEE+ Q+ KWG +E  HD ++ +LR + ++ T+F+ L
Sbjct: 217 LTLGLIDLRLTVEQAVLLSRLEEEYQIQKWGNIEWAHDYELQELRARTAAGTLFVHL 273


>gi|395514246|ref|XP_003761330.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor 2
           [Sarcophilus harrisii]
          Length = 295

 Score =  121 bits (304), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 79/240 (32%), Positives = 126/240 (52%), Gaps = 16/240 (6%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           K+FY+ VS  + +  NG+ + LD+R LKTP+ +   +P+  LA A+  EWD QQ D I+ 
Sbjct: 53  KKFYQNVSITQGE--NGYEINLDHRKLKTPNAKLFTVPSEALAVAVATEWDSQQ-DTIKF 109

Query: 154 FMMPLMKLACTALERVPLTRPK--IIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKI 211
           + M L  L  T+L+  P  R K  +I+  MK  + D +  R      L     E Q  + 
Sbjct: 110 YTMHLTTLCNTSLDN-PSQRNKDQLIQASMKFLDTDTICYRVEEPETLV----ELQKNEW 164

Query: 212 DPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIA---AAAH 268
           DP++ W E  +  K    ++  G    D  IKT E  +     Y + A+  I        
Sbjct: 165 DPVIDWAEKRYNVKIGSSTNIMG---PDIPIKTKETFISHLASYNMWALQGIEFVITQLK 221

Query: 269 SLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGL 328
           S+V+++G+    L +E+A+ L RLEE+ Q+ KWG VE  HD ++ +LR + ++ T+F+ L
Sbjct: 222 SMVLSLGLIDRHLTVEKAVLLSRLEEEYQIQKWGNVEWAHDYELHELRARTAAGTLFVHL 281


>gi|407776147|ref|ZP_11123436.1| chaperone [Thalassospira profundimaris WP0211]
 gi|407280863|gb|EKF06430.1| chaperone [Thalassospira profundimaris WP0211]
          Length = 240

 Score =  120 bits (302), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 73/217 (33%), Positives = 112/217 (51%), Gaps = 7/217 (3%)

Query: 86  FMTGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDY 145
            +T SI  KRFY+K      + G GW V+LD R +KTP+K    LP+  LA+ I AEWD 
Sbjct: 4   MLTQSI--KRFYKKADASADETGAGWRVLLDGRAVKTPAKADFLLPSEVLAREIAAEWD- 60

Query: 146 QQTDGIRPFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHE 205
            Q + ++P  MP+M+LA TA++RV   R  +I  L      DL+  RA    DL     E
Sbjct: 61  AQGEKVQPSTMPIMQLAATAIDRVRPNRDAVIAELTGYGRSDLLCYRASFPEDLI----E 116

Query: 206 RQVQKIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAA 265
           RQ +   PLL W +   G    V        Q+D  +  ++  ++  DDY L A+ ++  
Sbjct: 117 RQAKTWQPLLDWSKDHLGVVLTVTEGVMPITQDDHALLRLQEHVEGFDDYYLTALHSLTT 176

Query: 266 AAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
            + S++I + + + ++    A E   L+E   ++KWG
Sbjct: 177 ISGSVIIGLAVMKRQMDTTTAFEASMLDEGYAMEKWG 213


>gi|291415904|ref|XP_002724189.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor
           2-like [Oryctolagus cuniculus]
          Length = 282

 Score =  120 bits (302), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 73/241 (30%), Positives = 127/241 (52%), Gaps = 10/241 (4%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+ VS  + +   G+ + LD+R LKTP  +   +P+  LA A+  EW+ QQ D I+ 
Sbjct: 40  KRFYQNVSISQGE--GGFEINLDHRKLKTPQAKFFTVPSEALAIAVATEWESQQ-DTIKS 96

Query: 154 FMMPLMKLACTALERVPLTRPK--IIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKI 211
           + M L  L  T+L+  P  R K  +I+  +K  + D +  +      L     E Q  + 
Sbjct: 97  YTMHLTTLCNTSLDN-PTQRSKDQLIQAAIKFLDTDTICYKVEEPETLV----ELQKNEW 151

Query: 212 DPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLV 271
           DP+++W E+ +G +    +S  G        K + N +   + + L  I+ +     S+V
Sbjct: 152 DPVIEWAENRYGVEIGSSTSIMGPSIPARTHKVLANHLASYNMWALQGIEFVVTQLKSMV 211

Query: 272 IAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGLSRR 331
           + +G+    L +E+A+ L RLEE+ Q+ KWG VE  HD ++ +LR + ++ T+F+ L  +
Sbjct: 212 LTLGLTDLHLTVEQAVLLSRLEEEYQIQKWGNVEWAHDYELQELRARTAAGTLFIHLCSQ 271

Query: 332 N 332
           +
Sbjct: 272 S 272


>gi|383872844|ref|NP_001244880.1| ATP synthase mitochondrial F1 complex assembly factor 2 [Macaca
           mulatta]
 gi|402898947|ref|XP_003912468.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor 2
           [Papio anubis]
 gi|355568303|gb|EHH24584.1| ATP12-like protein [Macaca mulatta]
 gi|380788887|gb|AFE66319.1| ATP synthase mitochondrial F1 complex assembly factor 2 [Macaca
           mulatta]
 gi|383409983|gb|AFH28205.1| ATP synthase mitochondrial F1 complex assembly factor 2 precursor
           [Macaca mulatta]
          Length = 289

 Score =  120 bits (301), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 75/237 (31%), Positives = 124/237 (52%), Gaps = 10/237 (4%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+ VS  + +   G+ + LD R LKTP  +   +P+  LA A+  EWD QQ D I+ 
Sbjct: 47  KRFYQNVSITQGE--GGFEINLDQRKLKTPQAKLFTVPSEALAIAVATEWDSQQ-DTIKY 103

Query: 154 FMMPLMKLACTALERVPLTRPK--IIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKI 211
           + M L  L  T+L+  P  R K  +I   +K  + D +  R      L     E Q  + 
Sbjct: 104 YTMHLTTLCNTSLDN-PTQRNKDQLIRAAVKFLDTDTICYRVEEPETLV----ELQRNEW 158

Query: 212 DPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLV 271
           DP+++W E  +G +    +S  G        + + + +   + + L  I+ +AA   SLV
Sbjct: 159 DPIIEWAEKRYGVEINSSTSIMGPSIPAKTREVLVSHLASYNTWALQGIEFVAAQLKSLV 218

Query: 272 IAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGL 328
           + +G+    L +E+A+ L RLEE+ Q+ KWG +E  HD ++ +LR + ++ T+F+ L
Sbjct: 219 LTLGLIDLHLTVEQAVLLSRLEEEYQIQKWGNIEWAHDYELQELRARTAAGTLFIHL 275


>gi|355753814|gb|EHH57779.1| ATP12-like protein [Macaca fascicularis]
          Length = 289

 Score =  120 bits (301), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 75/237 (31%), Positives = 124/237 (52%), Gaps = 10/237 (4%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+ VS  + +   G+ + LD R LKTP  +   +P+  LA A+  EWD QQ D I+ 
Sbjct: 47  KRFYQNVSITQGE--GGFEINLDQRKLKTPQAKLFTVPSEALAIAVATEWDSQQ-DTIKY 103

Query: 154 FMMPLMKLACTALERVPLTRPK--IIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKI 211
           + M L  L  T+L+  P  R K  +I   +K  + D +  R      L     E Q  + 
Sbjct: 104 YTMHLTTLCNTSLDN-PTQRNKDQLIRAAVKFLDTDTICYRVEEPETLV----ELQRNEW 158

Query: 212 DPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLV 271
           DP+++W E  +G +    +S  G        + + + +   + + L  I+ +AA   SLV
Sbjct: 159 DPIIEWAEKRYGVEINSSTSIMGPSIPAKTREVLVSHLASYNTWALQGIEFVAAQLKSLV 218

Query: 272 IAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGL 328
           + +G+    L +E+A+ L RLEE+ Q+ KWG +E  HD ++ +LR + ++ T+F+ L
Sbjct: 219 LTLGLIDLHLTVEQAVLLSRLEEEYQIQKWGNIEWAHDYELQELRARTAAGTLFIHL 275


>gi|417398408|gb|JAA46237.1| Putative f1-atp synthase assembly protein [Desmodus rotundus]
          Length = 289

 Score =  120 bits (301), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 73/238 (30%), Positives = 125/238 (52%), Gaps = 10/238 (4%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+ VS  + +   G+ + LD+R LKTP  +   +P+  LA A+  EWD QQ D I+ 
Sbjct: 47  KRFYQNVSITQGE--GGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWDSQQ-DTIKF 103

Query: 154 FMMPLMKLACTALERVPLTRPK--IIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKI 211
           + M L  L  T+L+  P  R K  +I+  +K  + D +  R      L     E Q  + 
Sbjct: 104 YTMHLTTLCNTSLDN-PTQRNKDQLIQAAVKFLDTDTICYRVEEPETLV----ELQKNEW 158

Query: 212 DPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLV 271
           DP++ W E  +G +    +S  G    D   + + + +   + + L  I+ + A   S++
Sbjct: 159 DPIIAWAEKRYGVEIGSSTSIMGPSIPDKTREVLVSHLASYNTWALQGIEFVVAQLKSML 218

Query: 272 IAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGLS 329
           + +G+   +L +E+A+ L RLEE+ Q+ KWG VE  HD ++ +LR + ++  +F+ L 
Sbjct: 219 LTLGLIDLRLTVEQAVLLSRLEEEYQIQKWGNVEWAHDYELQELRARTAAGALFVHLC 276


>gi|348560289|ref|XP_003465946.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor
           2-like [Cavia porcellus]
          Length = 289

 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 73/241 (30%), Positives = 125/241 (51%), Gaps = 10/241 (4%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+ VS  + +   G+ + LD+R LKTP  +   +P+  LA A+  EWD Q  D I+ 
Sbjct: 47  KRFYQNVSITQGE--GGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWDSQH-DTIKF 103

Query: 154 FMMPLMKLACTALERVPLTRPK--IIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKI 211
           + M L  L  T+L+  P  R K  +I+  +K  + D +  R      L     E Q  + 
Sbjct: 104 YTMHLTTLCNTSLDN-PTQRSKDQVIQAAVKFLDTDTICYRVEEPETLV----ELQKNEW 158

Query: 212 DPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLV 271
           DP+++W E  +G +    +S  G        + + + +   + + L  I+ + A   S+V
Sbjct: 159 DPIIEWAEKRYGVEIGSSTSIMGPSIPAKTREVLVSHLASYNMWALQGIEFVVAQLKSMV 218

Query: 272 IAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGLSRR 331
           + +G+    L +E+A+ L RLEE+ Q+ KWG +E  HD ++ +LR + ++ T+F+ L   
Sbjct: 219 LTLGLIDLHLTVEQAVLLSRLEEEYQIQKWGNIEWAHDYELQELRARTAAGTLFVHLCSE 278

Query: 332 N 332
           N
Sbjct: 279 N 279


>gi|291416212|ref|XP_002724341.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor
           2-like [Oryctolagus cuniculus]
          Length = 282

 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 73/241 (30%), Positives = 126/241 (52%), Gaps = 10/241 (4%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+ VS  + +   G+ + LD+R LKTP  +   +P+  LA A+  EW+ QQ D I+ 
Sbjct: 40  KRFYQNVSISQGE--GGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWESQQ-DTIKS 96

Query: 154 FMMPLMKLACTALERVPLTRPK--IIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKI 211
           + M L  L  T+L+  P  R K  +I   +K  + D +  R      L     E Q  + 
Sbjct: 97  YTMHLTTLCNTSLDN-PTQRSKDQLIRAAIKFLDTDTICYRVEEPETLV----ELQKNEW 151

Query: 212 DPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLV 271
           DP+++W E+ +G +    +S  G        + + N +   + + L  I+ +     S+V
Sbjct: 152 DPVIEWAENRYGVEIGSSTSIMGPSIPARTHEVLANHLASYNMWALQGIEFVVTQLKSMV 211

Query: 272 IAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGLSRR 331
           + +G+    L +E+A+ L RLEE+ Q+ KWG VE  HD ++ +LR + ++ T+F+ L  +
Sbjct: 212 LTLGLTDLHLTVEQAVLLSRLEEEYQIQKWGNVEWAHDYELQELRARTAAGTLFIHLCSQ 271

Query: 332 N 332
           +
Sbjct: 272 S 272


>gi|358053753|dbj|GAB00061.1| hypothetical protein E5Q_06763 [Mixia osmundae IAM 14324]
          Length = 299

 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 82/242 (33%), Positives = 123/242 (50%), Gaps = 18/242 (7%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKA--IGAEWDYQQTDGI 151
           KRF++ V      DG+   V+LD RTLKT S  PL LP   LA A  I  EWD  Q   +
Sbjct: 63  KRFWKDVRLDPRPDGH-IAVLLDKRTLKTTSNVPLLLPRRNLAAALLIANEWD-NQDKVL 120

Query: 152 RPFMMPLMKLACTALE--RVPLTRPKIIEHLMKKFNQDLVFC----RAPADNDLTSGVHE 205
           +P  +P+  LA  A++    P  R +I + L+K  + D + C      PA  DL      
Sbjct: 121 KPHSLPITSLASRAIDGMSTPEQRKEIGQGLLKYLDTDTI-CFHEEEPPALVDL------ 173

Query: 206 RQVQKIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAA 265
            Q +   PL+ WV + FG     +++  G KQ    +  +   ++  D + LAA +    
Sbjct: 174 -QKRHWLPLITWVNATFGTDIAPFTTLMGTKQSARTVIVLAKRIESYDSFTLAAFERAVL 232

Query: 266 AAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVF 325
           A+ S  IA+G+  G L + EA +   +E + QV++WG VE  HD+D  D+R ++ SA +F
Sbjct: 233 ASKSYCIALGLIEGVLSVNEASDCAHVEVNSQVERWGQVEDTHDVDHEDIRTRLGSAAMF 292

Query: 326 LG 327
           L 
Sbjct: 293 LA 294


>gi|170094050|ref|XP_001878246.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164646700|gb|EDR10945.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 283

 Score =  119 bits (299), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 77/241 (31%), Positives = 127/241 (52%), Gaps = 13/241 (5%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLP---TLGLAKAIGAEWDYQQTDG 150
           KRF+  V    +  G+   + LD R LKTPS   L LP   TL LA  I AEWD Q+T  
Sbjct: 51  KRFWSTVGV--STQGDTLAITLDGRALKTPSGNTLLLPANKTL-LASVIAAEWDNQET-L 106

Query: 151 IRPFMMPLMKLACTALERVPL--TRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQV 208
           ++P  +P+  +A  A++ +    TR ++ + L+   + D + C     N+    + + Q 
Sbjct: 107 LKPHALPMTSIASRAVDELEHESTRQEVRKALVAYLDTDTI-CFF---NNYPEPLEKLQT 162

Query: 209 QKIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAH 268
           Q  +PLL W    FG +  +  S     Q +   K VE +++  D +E+AA++       
Sbjct: 163 QHWEPLLSWARETFGIQLNISGSILSVPQPEETKKIVERVLESLDKWEIAALERATYTTK 222

Query: 269 SLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGL 328
           SL+IA+ + +  L +E+A    ++E + Q+++WG VE  HD+D  D+R Q++SA + L  
Sbjct: 223 SLIIALALVKNHLSVEKAALAAQVEVNSQIERWGEVEDTHDVDYHDVRRQLASAAILLSN 282

Query: 329 S 329
           S
Sbjct: 283 S 283


>gi|83312204|ref|YP_422468.1| chaperone required for the assembly of the mitochondrial F1-ATPase
           [Magnetospirillum magneticum AMB-1]
 gi|82947045|dbj|BAE51909.1| Chaperone required for the assembly of the mitochondrial F1-ATPase
           [Magnetospirillum magneticum AMB-1]
          Length = 237

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 76/226 (33%), Positives = 113/226 (50%), Gaps = 12/226 (5%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY K S  E  DG G+ ++LD + +KTP  RPL +P   LA+AI  EW   Q + + P
Sbjct: 7   KRFY-KESAAELRDG-GFAILLDGKPIKTPGGRPLSVPAKPLAEAIAGEW-RSQGEQVLP 63

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP+ +LA TA++RV   RP I   LM     DL+  RA    DL +    RQ     P
Sbjct: 64  SSMPMTQLASTAIDRVGPERPHITGQLMNYAGTDLLCYRAETPGDLVA----RQTAAWQP 119

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           LL W         +V ++     Q D  +  +   +   DD+ L A+ +  AA  SL++ 
Sbjct: 120 LLDWAAQALDAPLLVTTALAAIAQPDASLAALRRHVDAYDDWRLTALQSSTAAMGSLILG 179

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQI 319
           + +  G+L  E A +  +L+E  Q++ W     G D + AD R ++
Sbjct: 180 LALMEGRLDPEAAFQASQLDETYQIELW-----GEDWEAADRRAEL 220


>gi|47226088|emb|CAG04462.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 284

 Score =  119 bits (298), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 78/257 (30%), Positives = 127/257 (49%), Gaps = 9/257 (3%)

Query: 75  SSSSSVTMPMSFMTGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLG 134
           S + S    + + T +   KRFY+ V+  + + G  + + LD R LKTP  +   +P   
Sbjct: 22  SRNQSCHFDLKYSTAASERKRFYQDVTISQGE-GGLFEINLDRRKLKTPGGKLFTVPNEA 80

Query: 135 LAKAIGAEWDYQQTDGIRPFMMPLMKLACTALERVPLTRPK--IIEHLMKKFNQDLVFCR 192
           LA A+  EWD Q+ D ++ + M L  L  TAL+  P  R K  +I   +K    D V  R
Sbjct: 81  LAIAVATEWDAQK-DTLKFYTMHLTTLCNTALDN-PTQRNKDQMITAALKFLETDTVCYR 138

Query: 193 APADNDLTSGVHERQVQKIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKT 252
                D   G+ E Q  + DP+L+W E+ +       SS  G    +    T+   +   
Sbjct: 139 V----DEPYGLVELQKNEWDPVLQWTENRYNVTIGSSSSILGPDIPEATKDTLRQHLNSY 194

Query: 253 DDYELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDI 312
           + + L   + +     S+V+++GI    L +E+A+ L RLEE+ Q+  WG VE  HD D+
Sbjct: 195 NFWSLTGFEYVITQLKSVVLSLGIIDRHLSVEQAVLLSRLEEEYQIRCWGNVEWAHDYDV 254

Query: 313 ADLRVQISSATVFLGLS 329
            +LR + S+  +F+ L+
Sbjct: 255 YELRARTSAGALFVHLT 271


>gi|317419180|emb|CBN81217.1| ATP synthase mitochondrial F1 complex assembly factor 2
           [Dicentrarchus labrax]
          Length = 284

 Score =  118 bits (296), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 126/254 (49%), Gaps = 7/254 (2%)

Query: 77  SSSVTMPMSFMTGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLA 136
           S    + + + T +   KRFY+ VS  + + G  + V LD R LKTP  +   +P   LA
Sbjct: 24  SQHCPLALKYSTATAERKRFYQDVSISQGE-GGLYEVNLDKRKLKTPGGKLFTVPNEALA 82

Query: 137 KAIGAEWDYQQTDGIRPFMMPLMKLACTALER-VPLTRPKIIEHLMKKFNQDLVFCRAPA 195
            A+  EWD Q+ D ++ + M L  L  TAL+     T+ ++I   +K    D +  R   
Sbjct: 83  IAVATEWDAQR-DTLKFYTMHLTTLCNTALDNPTQRTKDQMISAALKFLETDTICYRVEE 141

Query: 196 DNDLTSGVHERQVQKIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDY 255
                 G+ E Q  + DPLL W+E+ +       S+  G +  +    T    +   + +
Sbjct: 142 ----PEGLVELQKNEWDPLLHWIENRYNVTIGSSSNILGPEIPEATKDTFRQHLNSYNFW 197

Query: 256 ELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADL 315
            L  ++ +     S+V+++G     L +E+A+ L RLEE+ Q+  WG VE  HD D+ +L
Sbjct: 198 SLTGLEYVINQLKSVVLSMGTIDRHLSVEQAVLLSRLEEEYQIRHWGNVEWVHDYDMYEL 257

Query: 316 RVQISSATVFLGLS 329
           R + ++ T+F+ LS
Sbjct: 258 RARTAAGTLFVHLS 271


>gi|73917624|sp|Q91YY4.1|ATPF2_MOUSE RecName: Full=ATP synthase mitochondrial F1 complex assembly factor
           2; Flags: Precursor
 gi|15488961|gb|AAH13607.1| ATP synthase mitochondrial F1 complex assembly factor 2 [Mus
           musculus]
 gi|148694660|gb|EDL26607.1| ATP synthase mitochondrial F1 complex assembly factor 2, isoform
           CRA_c [Mus musculus]
          Length = 289

 Score =  118 bits (296), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 125/237 (52%), Gaps = 10/237 (4%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+ VS  + +   G+ + LD+R LKTP  +   +P+  LA A+  EWD QQ D I+ 
Sbjct: 47  KRFYQNVSISQGE--GGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWDSQQ-DTIKF 103

Query: 154 FMMPLMKLACTALERVPLTRPK--IIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKI 211
           + M L  L  T+L+  P  R K  +I   +K  + D +  R      L     E Q  + 
Sbjct: 104 YTMHLTTLCNTSLDN-PTQRSKDQLIRAAVKFLDTDTICYRVEEPETLV----ELQKNEW 158

Query: 212 DPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLV 271
           DP+++W E  +G +    +S  G        + + + +   + + L  I+ + A   S++
Sbjct: 159 DPVIEWAEKRYGMEIGSSTSIMGPSIPTQTREVLTSHLSSYNMWALQGIEFVVAQLKSML 218

Query: 272 IAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGL 328
           + +G+   +L +E+A+ L RLEE+ Q+ KWG +E  HD ++ +LR + ++ T+F+ L
Sbjct: 219 LTLGLIDLRLTVEQAVLLSRLEEEYQIQKWGNIEWAHDYELQELRARTAAGTLFVHL 275


>gi|238776839|ref|NP_663402.2| ATP synthase mitochondrial F1 complex assembly factor 2 [Mus
           musculus]
 gi|26347325|dbj|BAC37311.1| unnamed protein product [Mus musculus]
          Length = 298

 Score =  118 bits (295), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 125/237 (52%), Gaps = 10/237 (4%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+ VS  + +   G+ + LD+R LKTP  +   +P+  LA A+  EWD QQ D I+ 
Sbjct: 56  KRFYQNVSISQGE--GGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWDSQQ-DTIKF 112

Query: 154 FMMPLMKLACTALERVPLTRPK--IIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKI 211
           + M L  L  T+L+  P  R K  +I   +K  + D +  R      L     E Q  + 
Sbjct: 113 YTMHLTTLCNTSLDN-PTQRSKDQLIRAAVKFLDTDTICYRVEEPETLV----ELQKNEW 167

Query: 212 DPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLV 271
           DP+++W E  +G +    +S  G        + + + +   + + L  I+ + A   S++
Sbjct: 168 DPVIEWAEKRYGMEIGSSTSIMGPSIPTQTREVLTSHLSSYNMWALQGIEFVVAQLKSML 227

Query: 272 IAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGL 328
           + +G+   +L +E+A+ L RLEE+ Q+ KWG +E  HD ++ +LR + ++ T+F+ L
Sbjct: 228 LTLGLIDLRLTVEQAVLLSRLEEEYQIQKWGNIEWAHDYELQELRARTAAGTLFVHL 284


>gi|410896117|ref|XP_003961546.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor
           2-like [Takifugu rubripes]
          Length = 285

 Score =  118 bits (295), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 127/256 (49%), Gaps = 9/256 (3%)

Query: 79  SVTMPMSFMTGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKA 138
           S    +++ T +   KRFY+ V+  + + G  + + LD R LKTP  +   +P   LA A
Sbjct: 27  SCNFHLNYSTATSERKRFYQDVTISQGE-GGLFEINLDRRKLKTPGGKLFTVPNEALAIA 85

Query: 139 IGAEWDYQQTDGIRPFMMPLMKLACTALERVPLTRPK--IIEHLMKKFNQDLVFCRAPAD 196
           +  EWD Q+ D ++ + M +  L  TAL+  P  R K  +I   +K    D V  R    
Sbjct: 86  VATEWDAQK-DTLKFYTMHMTTLCNTALDN-PTQRNKDQMITAALKFLETDTVCYRV--- 140

Query: 197 NDLTSGVHERQVQKIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYE 256
            D   G+ E Q  + DP+L+W E+ +       SS  G +  +    T+   +   + + 
Sbjct: 141 -DEPYGLVELQKNEWDPVLQWTENRYNVTIGSSSSILGPEIPEATKDTLRQHLNSYNFWS 199

Query: 257 LAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLR 316
           L   + +     S+V+++GI    L +E+A+ L RLEE+ Q+  WG VE  HD D  +LR
Sbjct: 200 LTGFEYVITQLKSVVLSLGIIDRHLSVEQAVLLSRLEEEYQIRCWGSVEWAHDYDTYELR 259

Query: 317 VQISSATVFLGLSRRN 332
            + ++  +F+ L+  N
Sbjct: 260 ARTAAGALFVHLTSEN 275


>gi|432921540|ref|XP_004080197.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor
           2-like [Oryzias latipes]
          Length = 287

 Score =  118 bits (295), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 76/249 (30%), Positives = 125/249 (50%), Gaps = 9/249 (3%)

Query: 86  FMTGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDY 145
           + T S   KRFY+ VS  + DDG  + + LD R LKTP  +   +P   LA A+  EWD 
Sbjct: 36  YSTASTERKRFYQDVSISQGDDG-LYEINLDRRKLKTPGGKLFTVPNEALAIAVATEWDA 94

Query: 146 QQTDGIRPFMMPLMKLACTALERVPLTRPK--IIEHLMKKFNQDLVFCRAPADNDLTSGV 203
           Q+   ++ + M L  L  TAL+  P  R K  +I   +K    D + C    D     G+
Sbjct: 95  QR-GTLKFYTMHLTTLCNTALDN-PTQRNKEQMINSALKFLETDTI-CYRVED---PPGL 148

Query: 204 HERQVQKIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAI 263
            + Q  + DP+L W+E+ +       SS  G +      +T    +     + L  ++ +
Sbjct: 149 VDLQKNEWDPVLHWIENRYNVTIGSSSSILGPEIPQATKETFRQHLNSYSLWSLTGLEFV 208

Query: 264 AAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSAT 323
            +   S+++++G+    L +E+A+ L RLEE+ Q+  WG VE  HD D+ +LR + ++  
Sbjct: 209 ISQLKSILLSLGMVDRYLTVEQAVLLSRLEEEYQISHWGNVEWAHDYDMYELRARTAAGA 268

Query: 324 VFLGLSRRN 332
           +F+ LS  N
Sbjct: 269 LFIQLSSEN 277


>gi|390598435|gb|EIN07833.1| ATP12-domain-containing protein [Punctularia strigosozonata
           HHB-11173 SS5]
          Length = 284

 Score =  117 bits (294), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 79/264 (29%), Positives = 128/264 (48%), Gaps = 14/264 (5%)

Query: 68  RKQETASSSSSSVTMPMSFMTGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRP 127
           R Q TA++   ++T   +        KRF++ V   E D    + V LD RTL+TP    
Sbjct: 29  RCQATAATDGPAIT---ATNKAEASLKRFWKTVGVEEKD--GTYAVTLDQRTLRTPGGNR 83

Query: 128 LKLPTLG--LAKAIGAEWDYQQTDGIRPFMMPLMKLACTALE--RVPLTRPKIIEHLMKK 183
           L LP     +A  +  EWD Q+T  ++P  +P+  LA  A++  + P TR ++   L+K 
Sbjct: 84  LLLPKEKKLVAALVATEWDNQET-LLKPHALPMTSLASRAVDAFKDPETRKQVRSSLLKY 142

Query: 184 FNQDLVFCRAPADNDLTSGVHERQVQKIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIK 243
           F  D +         L     E Q +   P+L W  S FG +   + S   G Q    ++
Sbjct: 143 FETDTICFHETEPPALV----ELQKKHWHPILDWARSTFGVEIHAFDSLLAGPQPPETVQ 198

Query: 244 TVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGL 303
             + +M+  D +ELAA++       S +IA+ + + ++  EEA     +E + Q+ +WG 
Sbjct: 199 KFDEIMQSLDAWELAALERTTYVTKSFLIALALVKRQITAEEAALASHVEVNSQIQRWGE 258

Query: 304 VEGGHDIDIADLRVQISSATVFLG 327
           VE  HD+D  D+R  + SA+V L 
Sbjct: 259 VEDSHDVDYHDVRRHLGSASVLLS 282


>gi|348502431|ref|XP_003438771.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor
           2-like [Oreochromis niloticus]
          Length = 285

 Score =  117 bits (293), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 124/238 (52%), Gaps = 9/238 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+ VS  +++ G  + + LD R LKTP  +   +P   LA A+  EWD Q+ D ++ 
Sbjct: 42  KRFYQDVSISQSE-GGLYEINLDQRKLKTPGGKLFTVPNEALAIAVATEWDAQR-DTLKF 99

Query: 154 FMMPLMKLACTALERVPLTRPK--IIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKI 211
           + M L  L  TAL+  P  R K  +I   +K    D +  R     D   G+ E Q  + 
Sbjct: 100 YTMHLTTLCNTALDN-PTQRSKEQMITAALKFLETDTICYRV----DEPHGLVELQKNEW 154

Query: 212 DPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLV 271
           DP+L+W+E  +       +S  G +  +     +   +K  + + L  ++ +     S+V
Sbjct: 155 DPVLQWIEKRYNVAIGSSASILGPEIPEATKDNLRQHLKSYNFWSLTGLEYVITQLKSIV 214

Query: 272 IAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGLS 329
           +++G+    L +E+A+ L RLEE+ Q+ +WG VE  HD D+ +LR + ++  +F+ L+
Sbjct: 215 LSLGMIDRHLSVEQAVLLSRLEEEYQIRRWGNVEWAHDYDMYELRARTAAGALFVHLT 272


>gi|334332668|ref|XP_001379272.2| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor
           2-like [Monodelphis domestica]
          Length = 439

 Score =  117 bits (293), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 78/241 (32%), Positives = 125/241 (51%), Gaps = 16/241 (6%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           K+FY+ VS  + +   G+ + LD+R LKTP+ R   +P+  LA A+  EWD QQ D I+ 
Sbjct: 197 KKFYQNVSITQGE--GGYEINLDHRKLKTPNARLFTVPSEALAVAVATEWDSQQ-DTIKF 253

Query: 154 FMMPLMKLACTALERVPLTRPK--IIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKI 211
           + M L  L  T+L+  P  R K  +I   MK  + D +  R      L     E Q  + 
Sbjct: 254 YTMHLTTLCNTSLDN-PSQRNKDQLIHASMKFLDTDTICYRVEEPETLV----ELQKNEW 308

Query: 212 DPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAA---IDAIAAAAH 268
           DP+++W E  +  K    ++  G    D   KT E  +     Y + A   I+ +     
Sbjct: 309 DPVIEWAEKRYDVKLGSSTNIMG---PDIPAKTKEVFISHLASYNMWALQGIEFVVTQLK 365

Query: 269 SLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGL 328
           SL++++G+    L +E+A+ L RLEE+ Q+ KWG VE  HD ++ +LR + ++ T+F+ L
Sbjct: 366 SLILSLGLIDRHLTVEKAVLLSRLEEEYQIQKWGNVEWAHDYELHELRARTAAGTLFVHL 425

Query: 329 S 329
            
Sbjct: 426 C 426


>gi|157822047|ref|NP_001100476.1| ATP synthase mitochondrial F1 complex assembly factor 2 [Rattus
           norvegicus]
 gi|149052829|gb|EDM04646.1| ATP synthase mitochondrial F1 complex assembly factor 2
           (predicted), isoform CRA_c [Rattus norvegicus]
          Length = 298

 Score =  117 bits (293), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 125/237 (52%), Gaps = 10/237 (4%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+ VS  + +   G+ + LD+R LKTP  +   +P+  LA A+  EWD QQ D I+ 
Sbjct: 56  KRFYQNVSISQGE--GGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWDSQQ-DTIKF 112

Query: 154 FMMPLMKLACTALERVPLTRPK--IIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKI 211
           + M L  L  T+L+  P  R K  +I   +K  + D +  R      L     E Q  + 
Sbjct: 113 YTMHLTTLCNTSLDN-PTQRNKDQLIRAAVKFLDTDTICYRVEEPETLV----ELQKNEW 167

Query: 212 DPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLV 271
           DP+++W E  +G +    +S  G        + + + +   + + L  I+ + A   S++
Sbjct: 168 DPIIEWAEKRYGMEIGSSTSIMGPSIPTQTREVLTSHLASYNMWALQGIEFVVAQLKSML 227

Query: 272 IAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGL 328
           + +G+   +L +E+A+ L RLEE+ Q+ KWG +E  HD ++ +LR + ++ T+F+ L
Sbjct: 228 LTLGLIDLRLTVEQAVLLSRLEEEYQIQKWGNIEWAHDYELQELRARTAAGTLFVHL 284


>gi|126728210|ref|ZP_01744026.1| hypothetical protein SSE37_19507 [Sagittula stellata E-37]
 gi|126711175|gb|EBA10225.1| hypothetical protein SSE37_19507 [Sagittula stellata E-37]
          Length = 236

 Score =  117 bits (292), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 69/217 (31%), Positives = 116/217 (53%), Gaps = 7/217 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRF++  +   +  G G+ V LD R +KTP+K PL +PT GLA A+ AEW  Q+ + + P
Sbjct: 7   KRFWKDATVEPS--GPGFAVKLDGRGVKTPAKTPLVVPTEGLADAVAAEWRAQE-EHVNP 63

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP  +++ +AL++V   R ++ + L    + DL+  RA    D  +G+ ERQ +  DP
Sbjct: 64  MTMPFTRMSNSALDKVATQRAEVADMLAAYGDSDLLCYRA----DRPAGLVERQNESWDP 119

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           LL W    +G +           Q    +  +   +   D ++LAA   + + + SLV+A
Sbjct: 120 LLDWASETYGARLEPRIGVMHHPQPSEALARLAQEVHGQDAFQLAAFHDLVSMSGSLVLA 179

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDI 310
           + + RG  + E+A  L R++E  Q ++WG+ E   +I
Sbjct: 180 LAVIRGHREAEDAWRLSRIDETWQEEQWGIDEEAAEI 216


>gi|354467882|ref|XP_003496397.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor
           2-like [Cricetulus griseus]
          Length = 248

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 77/242 (31%), Positives = 125/242 (51%), Gaps = 18/242 (7%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+ VS  + +   G+ + LD+R LKTP  +   +P+  LA A+  EWD QQ D I+ 
Sbjct: 4   KRFYQNVSISQGE--GGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWDSQQ-DTIKF 60

Query: 154 FMMPLMKLACTALERVPLTRPK--IIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKI 211
           + M L  L  T+L+  P  R K  +I   +K  + D +  R      L     E Q  + 
Sbjct: 61  YTMHLTTLCNTSLDN-PTQRNKDQMIRAAVKFLDTDTICYRVEEPETLV----ELQKNEW 115

Query: 212 DPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAA-----IDAIAAA 266
           DP+++W E  +G +    +S  G        +T E L      Y + A     I+ + A 
Sbjct: 116 DPVIEWAEKRYGVEIGSSTSIMGPSIP---TQTREVLTSHLSSYNMWALQGTRIEFVVAQ 172

Query: 267 AHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFL 326
             S+V+ +G+   +L +E+A+ L RLEE+ Q+ KWG +E  HD ++ +LR + ++ T+F+
Sbjct: 173 LKSMVLTLGLIDRRLTVEQAVLLSRLEEEYQIQKWGNIEWAHDYELQELRARTAAGTLFV 232

Query: 327 GL 328
            L
Sbjct: 233 HL 234


>gi|428182376|gb|EKX51237.1| hypothetical protein GUITHDRAFT_103155 [Guillardia theta CCMP2712]
          Length = 255

 Score =  116 bits (291), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 134/256 (52%), Gaps = 32/256 (12%)

Query: 82  MPMSFMTGSIVGKRFYEKVSTREADDG--------NGWTVMLDYRTLKTPSKRPLKLPTL 133
           +P+  +      KRFY++   ++              W++ LD R ++TP+ + L +PT 
Sbjct: 11  VPLGMLKADGTSKRFYKQAGVQQVKQDCPRTGMLRTMWSLTLDGRGVRTPANKLLTVPTK 70

Query: 134 GLAKAIGAEWDYQQTDGIRPFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRA 193
            +A AI  E+D Q  + I P+ MPL  LA T+++++  +R  +     ++   D      
Sbjct: 71  DMAMAIAMEFDVQDLN-ILPYTMPLTTLATTSIDQI--SRSDV-----RQSTND------ 116

Query: 194 PADNDLTSGVHERQVQKIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTD 253
           P D      + E++ +    +  W ES + FK V+   +   +Q D ++ TV + +    
Sbjct: 117 PPD------LVEKEEKIWGRICDWAESHYKFKLVISHEWLQTEQPDDIMSTVRDDLLGRS 170

Query: 254 DYELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLV----EGGHD 309
           D+ L  ID +A +  SL++++ + +G L  +EA++  RL ED  V++WG+V     GGHD
Sbjct: 171 DWRLTVIDQVAGSTGSLMLSLALSQGFLNADEAMKAARLSEDYNVERWGMVMNSGMGGHD 230

Query: 310 IDIADLRVQISSATVF 325
           ID AD+R ++++A ++
Sbjct: 231 IDAADMRSRLAAAWLY 246


>gi|327289766|ref|XP_003229595.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor
           2-like [Anolis carolinensis]
          Length = 289

 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 120/237 (50%), Gaps = 8/237 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+ V+  + +   G+ + LD+R LKTP  +   +P+  LA A+  EWD Q+ D I+P
Sbjct: 47  KRFYQNVTISQGE--GGFEINLDHRKLKTPQAKLFTVPSETLALAVATEWDSQR-DTIKP 103

Query: 154 FMMPLMKLACTALER-VPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKID 212
           + M L  L  TAL+     T+ +II   +K    D +  R      L     E Q  + D
Sbjct: 104 YTMHLTTLCNTALDNPSQRTKDQIIRAALKFLETDTICYRVEEPPALV----ELQKNEWD 159

Query: 213 PLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVI 272
           P+++W E  +       +S  G            + +   + + L  I+ +     SL++
Sbjct: 160 PIIEWAEKRYNVVIGSSTSIMGPSIPQSTKDIFISHLASYNTWALQGIEYMITQLKSLIL 219

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGLS 329
           ++G+    L +E A+ L RLEE+ Q+ +WG VE  HD D+ ++R + ++AT+F+ L 
Sbjct: 220 SMGLLDKHLTVEHAVLLSRLEEEYQIQRWGNVEWAHDYDLHEMRSRTAAATLFVHLC 276


>gi|395836284|ref|XP_003791088.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor 2
           [Otolemur garnettii]
          Length = 290

 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 122/238 (51%), Gaps = 10/238 (4%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+ VS  + +   G+ + LD+R LKTP  +   +P+  LA A+  EWD QQ D I+ 
Sbjct: 48  KRFYQNVSITQGE--GGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWDSQQ-DTIKY 104

Query: 154 FMMPLMKLACTALERVPLTRPK--IIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKI 211
           + M L  L  T+L+  P  R K  +I   +K  + D +  R      L     E Q  + 
Sbjct: 105 YTMHLTTLCNTSLDN-PTQRNKDQLIRAAVKFLDTDTICYRVEEPETLV----ELQKNEW 159

Query: 212 DPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLV 271
           DP+++W E  +G      +S  G        + + + +   + + L  I+ +     S+V
Sbjct: 160 DPIIEWAEKRYGVAIGSSTSIMGPSIPAKTREVLVSHLASYNMWALQGIEFVVTQLKSMV 219

Query: 272 IAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGLS 329
           + +G+    L +E+A+ L RLEE+ Q+ KWG +E  HD ++ +LR + ++ T+F+ L 
Sbjct: 220 LTLGLIDRHLTVEQAVLLSRLEEEYQIQKWGNIEWAHDYELQELRARTAAGTLFVHLC 277


>gi|332560171|ref|ZP_08414493.1| ATP12 ATPase [Rhodobacter sphaeroides WS8N]
 gi|332277883|gb|EGJ23198.1| ATP12 ATPase [Rhodobacter sphaeroides WS8N]
          Length = 235

 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/211 (32%), Positives = 114/211 (54%), Gaps = 7/211 (3%)

Query: 92  VGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGI 151
           V KRF+++ S   A++  G+ V+LD R ++TP+KRPL LPT  LA+A+ +EW  Q+ + +
Sbjct: 5   VAKRFWKEASV--AEEPGGFAVLLDGRGVRTPAKRPLILPTRALAEAVASEWQAQEGE-V 61

Query: 152 RPFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKI 211
           RP  MP+ + A +AL++V     ++ E L      DL+  RA A   L +    RQ +  
Sbjct: 62  RPETMPVTRSANSALDKVAPQFDEVTEMLAAYGGTDLLCYRATAPEALVA----RQARAW 117

Query: 212 DPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLV 271
           DP+L W    F       +      Q +  +  +   ++    +++A    + A + SL+
Sbjct: 118 DPVLAWAAERFEAPLETTAGVMHQAQPEASLTRLAEHVRSFSPFQVAGFHDLVAISGSLI 177

Query: 272 IAIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           + +G+  G L  EEA EL RL+E  Q+++WG
Sbjct: 178 LGLGVTEGHLLPEEAWELSRLDESWQIEQWG 208


>gi|77462290|ref|YP_351794.1| hypothetical protein RSP_1746 [Rhodobacter sphaeroides 2.4.1]
 gi|221638144|ref|YP_002524406.1| ATP12 ATPase [Rhodobacter sphaeroides KD131]
 gi|77386708|gb|ABA77893.1| conserved hypothetical protein [Rhodobacter sphaeroides 2.4.1]
 gi|221158925|gb|ACL99904.1| ATP12 ATPase [Rhodobacter sphaeroides KD131]
          Length = 235

 Score =  115 bits (289), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 67/211 (31%), Positives = 114/211 (54%), Gaps = 7/211 (3%)

Query: 92  VGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGI 151
           V KRF+++ S   A++  G+ V+LD R ++TP+KRPL LPT  LA+A+ +EW  Q+ + +
Sbjct: 5   VAKRFWKEASV--AEEPGGFAVLLDGRGVRTPAKRPLILPTCALAEAVASEWQAQEGE-V 61

Query: 152 RPFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKI 211
           RP  MP+ + A +AL++V     ++ E L      DL+  RA A   L +    RQ +  
Sbjct: 62  RPETMPVTRSANSALDKVAPQFDEVTEMLAAYGGTDLLCYRATAPEALVA----RQARAW 117

Query: 212 DPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLV 271
           DP+L W    F       +      Q +  +  +   ++    +++A    + A + SL+
Sbjct: 118 DPVLAWAAERFEAPLETTAGVMHQAQPEASLTRLAEHVRSFSPFQVAGFHDLVAISGSLI 177

Query: 272 IAIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           + +G+  G L  EEA EL R++E  Q+++WG
Sbjct: 178 LGLGVTEGHLLPEEAWELSRVDESWQIEQWG 208


>gi|409082665|gb|EKM83023.1| hypothetical protein AGABI1DRAFT_69157 [Agaricus bisporus var.
           burnettii JB137-S8]
          Length = 297

 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 124/243 (51%), Gaps = 11/243 (4%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLG--LAKAIGAEWDYQQTDGI 151
           KRF++KV   +   G+   V LD R LKTPS  PL +P+    LA  I AEWD+Q T  I
Sbjct: 61  KRFWKKVDIEKR--GDSLAVTLDTRPLKTPSGTPLFVPSSKDLLATLIAAEWDHQTT-LI 117

Query: 152 RPFMMPLMKLACTALERV--PLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQ 209
           +P  +P+  LA  A++ +    TR ++ E L+   + D + C      D T  +   Q +
Sbjct: 118 KPHALPMTSLASRAIDGMSDASTRAEVQETLLNYLDTDTI-CFW---EDSTPQLERLQAE 173

Query: 210 KIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHS 269
             DPL +WVE  F  +    +S    +Q       + N++K  D +++AA++       S
Sbjct: 174 HWDPLFEWVEKTFAVQLSKNTSILFNEQPRDTRVKLGNVLKNFDQWQMAAMERATYTTKS 233

Query: 270 LVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGLS 329
            +IA+ +    L  E+A     +E   Q+++WG VE  HD+D  D+R  +SSA + L  S
Sbjct: 234 FIIALALVFRSLTPEQAALAASVEVKSQIERWGEVEDTHDVDYHDVRRHLSSAALLLCNS 293

Query: 330 RRN 332
            ++
Sbjct: 294 SKD 296


>gi|145482517|ref|XP_001427281.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124394361|emb|CAK59883.1| unnamed protein product [Paramecium tetraurelia]
          Length = 266

 Score =  115 bits (288), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 80/246 (32%), Positives = 134/246 (54%), Gaps = 21/246 (8%)

Query: 94  KRFYEK----VSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTD 149
           KRFY++    ++T   +  + W V LD +T+KTPSK  L +P+  LA  I  E++  QT+
Sbjct: 23  KRFYKEATIEMATNPTNPYHQWLVKLDGKTVKTPSKNTLAVPSPQLASFIAHEFN-MQTE 81

Query: 150 GIRPFMMPLMKLACTAL--ERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQ 207
            IRP  MPL+ LA  A+  E     R  + + ++    +D V  R   +  L    ++ Q
Sbjct: 82  YIRPTTMPLLTLARNAIDIEADDRIRQFMEQSIISYLERDTVLFRENPETKL----YKIQ 137

Query: 208 VQKIDPLLKWVESEFGFKPVVYSSFFGG-----KQEDGLIKTVENLMKKTDDYELAAIDA 262
            +K+DP LK    +FG       + FG      KQ D +   +E ++ + ++++L ++DA
Sbjct: 138 KEKLDPQLKIFNEKFGLH---LKTNFGLNIEPLKQYDQI--RIETIVSELNNWQLVSLDA 192

Query: 263 IAAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSA 322
                 S ++A+ I+   LQ+EEA++L RLEED Q+ ++G VEG HD D   + + +S++
Sbjct: 193 KVENLKSCILALLIWNNHLQVEEAVKLSRLEEDFQIAQFGKVEGHHDYDENTIMMNVSAS 252

Query: 323 TVFLGL 328
            +F  L
Sbjct: 253 KLFAQL 258


>gi|431914507|gb|ELK15757.1| ATP synthase mitochondrial F1 complex assembly factor 2 [Pteropus
           alecto]
          Length = 289

 Score =  115 bits (288), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 122/237 (51%), Gaps = 10/237 (4%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+ VS  + +   G+ + LD+R LKTP  +   +P+  LA A+  EWD QQ D I+ 
Sbjct: 47  KRFYQNVSITQGE--GGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWDSQQ-DTIKF 103

Query: 154 FMMPLMKLACTALERVPLTRPK--IIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKI 211
           + M L  L  T+L+  P  R K  +I   +K  + D +  R      L     E Q  + 
Sbjct: 104 YTMHLTTLCNTSLDN-PTQRNKDQLIRAAVKFLDTDTICYRVEEPQTLV----ELQKNEW 158

Query: 212 DPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLV 271
           DP+++W E  +G +    +S  G        + + + +   + + L  I+ +     S+V
Sbjct: 159 DPIIEWAEKRYGIEIGSSTSIMGPSIPARTQEVLVSHLASYNMWALQGIEFVVTQLKSMV 218

Query: 272 IAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGL 328
           + +G+    L +E+A+ L RLEE+ Q+ KWG VE  HD ++ +LR + ++  +F+ L
Sbjct: 219 LTLGLIDLHLTVEQAVLLSRLEEEYQIQKWGNVEWAHDYELQELRARTAAGALFVHL 275


>gi|449281381|gb|EMC88461.1| ATP synthase mitochondrial F1 complex assembly factor 2, partial
           [Columba livia]
          Length = 245

 Score =  115 bits (287), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 122/237 (51%), Gaps = 10/237 (4%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+ VS  + +   G+ + LD+R LKTP  +   +P+  LA A+  EWD Q+ D I+ 
Sbjct: 3   KRFYQNVSISQGE--GGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWDSQK-DTIKF 59

Query: 154 FMMPLMKLACTALERVPLTRPK--IIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKI 211
           + M L  L  TAL+  P  R K  +I   +K    D V  R     +  + + E Q  + 
Sbjct: 60  YTMHLTTLCNTALDN-PTQRNKTQLIRAAVKFLETDTVCYRV----EEPAALAELQKNEW 114

Query: 212 DPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLV 271
           DP++ W E  +       +S  G        +T  + +   + + L  I+ +     SL+
Sbjct: 115 DPIVAWAEKRYNVAIGSSTSILGPNIPASTKETFISHLASYNMWALQGIEYVITQLKSLI 174

Query: 272 IAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGL 328
           +++G+    + +E+A+ L RLEE+ Q+ +WG VE  HD D+ +LR + ++ T+F+ L
Sbjct: 175 LSMGLIDRHITVEKAVLLSRLEEEYQIQRWGNVEWAHDYDLCELRARTAAGTLFVHL 231


>gi|410980047|ref|XP_003996392.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor 2
           [Felis catus]
          Length = 289

 Score =  115 bits (287), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 125/237 (52%), Gaps = 10/237 (4%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+ VS  + +   G+ + LD+R LKTP  +   +P+  LA A+  EWD QQ D I+ 
Sbjct: 47  KRFYQNVSITQGE--GGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWDSQQ-DTIKF 103

Query: 154 FMMPLMKLACTALERVPLTRPK--IIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKI 211
           + M L  L  T+L+  P  R K  +I+  +K  + D +  R     D  + + E Q  + 
Sbjct: 104 YTMHLTTLCNTSLDN-PTQRNKDQLIQAAVKFLDTDTICYRV----DEPATLVELQRNEW 158

Query: 212 DPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLV 271
           DP+++W E  +  +    +S  G        + + + +   + + L  I+ +     S+V
Sbjct: 159 DPIIEWAEERYDVEIGSSTSIMGPSIPARTREVLTSHLASYNMWALQGIEFVVTQLKSMV 218

Query: 272 IAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGL 328
           + +G+    L +E+A+ L RLEE+ Q+ KWG +E  HD ++ +LR + ++ T+F+ L
Sbjct: 219 LTLGLIDRHLTVEQAVLLSRLEEEYQIQKWGNIEWAHDYELRELRARTAAGTLFVHL 275


>gi|126461166|ref|YP_001042280.1| ATP12 ATPase [Rhodobacter sphaeroides ATCC 17029]
 gi|126102830|gb|ABN75508.1| ATP12 ATPase [Rhodobacter sphaeroides ATCC 17029]
          Length = 235

 Score =  114 bits (286), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 67/209 (32%), Positives = 113/209 (54%), Gaps = 7/209 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRF+++ S   A++  G+ V+LD R ++TP+KRPL LPT  LA+A+ +EW  Q+ + +RP
Sbjct: 7   KRFWKEASV--AEEPGGFAVLLDGRGVRTPAKRPLILPTCALAEAVASEWQAQEGE-VRP 63

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP+ + A +AL++V     ++ E L      DL+  RA A   L +    RQ +  DP
Sbjct: 64  ETMPVTRSANSALDKVAPQFDEVTEMLAAYGGTDLLCYRATAPEALVA----RQARAWDP 119

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           +L W    F       +      Q +  +  +   ++    +++A    + A + SL++ 
Sbjct: 120 VLAWAAERFEAPLETTAGVMHQAQPEASLTRLAEHVRGFSPFQVAGFHDLVAISGSLILG 179

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           +G+  G L  EEA EL RL+E  Q+++WG
Sbjct: 180 LGVTEGHLLPEEAWELSRLDESWQIEQWG 208


>gi|321253658|ref|XP_003192808.1| hypothetical protein CGB_C4510W [Cryptococcus gattii WM276]
 gi|317459277|gb|ADV21021.1| hypothetical protein CNC03060 [Cryptococcus gattii WM276]
          Length = 292

 Score =  114 bits (286), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 125/237 (52%), Gaps = 10/237 (4%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLG--LAKAIGAEWDYQQTDGI 151
           +RF++ V+   +   +G+ + LD+R LKTP    L++P     LA  I  EW+  Q + +
Sbjct: 59  RRFWKTVNI-SSTPSDGFLINLDHRALKTPFGAKLEIPKERRLLAALIANEWE-NQDEVL 116

Query: 152 RPFMMPLMKLACTALERVPL--TRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQ 209
           +   +P+  LA  A++ +    TRP +IE L+K    D +       +D  + +   Q +
Sbjct: 117 KQHALPVTSLASRAIDGLSEGPTRPAVIEALLKYLETDTILY----PDDAPAPLVRLQKE 172

Query: 210 KIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHS 269
             DPL  W++ +FG +  +   F   KQ D  ++ ++ +++  D +ELAA++    A  S
Sbjct: 173 HWDPLHAWLKEDFGVELQLAQGFGAVKQTDDNVEKLKKVVEAMDGWELAALERAVYATKS 232

Query: 270 LVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFL 326
            VIA+ + RG+L   EA +   +E   Q+++WG VE  HD+D  D+R  + SA   L
Sbjct: 233 FVIALALCRGRLTAHEAAQASHVEVSSQIERWGEVEDTHDVDYQDIRRALGSAACLL 289


>gi|115497412|ref|NP_001069091.1| ATP synthase mitochondrial F1 complex assembly factor 2 precursor
           [Bos taurus]
 gi|119367813|sp|Q1LZ96.1|ATPF2_BOVIN RecName: Full=ATP synthase mitochondrial F1 complex assembly factor
           2; Flags: Precursor
 gi|94534775|gb|AAI16132.1| ATP synthase mitochondrial F1 complex assembly factor 2 [Bos
           taurus]
 gi|296476577|tpg|DAA18692.1| TPA: ATP synthase mitochondrial F1 complex assembly factor 2
           precursor [Bos taurus]
 gi|440907897|gb|ELR57985.1| ATP synthase mitochondrial F1 complex assembly factor 2 [Bos
           grunniens mutus]
          Length = 289

 Score =  114 bits (286), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 73/237 (30%), Positives = 123/237 (51%), Gaps = 10/237 (4%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+ VS  + +   G+ + LD+R L+TP  +   +P+  LA A+  EWD QQ D I+ 
Sbjct: 47  KRFYQNVSISQGE--GGFEINLDHRKLRTPQGKLFTVPSEALAIAVATEWDSQQ-DTIKM 103

Query: 154 FMMPLMKLACTALERVPLTRPK--IIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKI 211
           + M L  L  T+L+  P  R K  +I   +K  + D V  R      L     E Q  + 
Sbjct: 104 YTMHLTTLCNTSLDN-PTQRDKDQLIRAAVKFLDTDTVCYRVEEPETLV----ELQRNEW 158

Query: 212 DPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLV 271
           DP++ W E  +G +    +S  G        + + + +   + + L  I+ +     SLV
Sbjct: 159 DPVISWAEKRYGVEIGSSTSITGPSIPARTREVLVSHLASYNMWALQGIEFVVTQLKSLV 218

Query: 272 IAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGL 328
           + +G+   +L +E+A+ L RLEE+ Q+ KWG +E  HD ++ +LR + ++ T+F+ L
Sbjct: 219 LTLGLTDLRLTVEQAVLLSRLEEEYQIQKWGNIEWAHDYELQELRARTAAGTLFVHL 275


>gi|398380032|ref|ZP_10538150.1| chaperone required for the assembly of F1-ATPase [Rhizobium sp.
           AP16]
 gi|397721348|gb|EJK81896.1| chaperone required for the assembly of F1-ATPase [Rhizobium sp.
           AP16]
          Length = 261

 Score =  114 bits (286), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 73/226 (32%), Positives = 118/226 (52%), Gaps = 13/226 (5%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+ V  RE +DG+   + LD + +KTP++R L +PT  LAK + AEW  +Q + I P
Sbjct: 31  KRFYKDVGIREGEDGH--VIELDGKVVKTPARRSLAVPTEALAKLVAAEW-ARQVEIIDP 87

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
            +MP+ +L  TAL+ V      + E +++  + DL+  RA    D    + ERQ ++ DP
Sbjct: 88  TVMPVTRLVNTALDGVATDPQAVFEDILRFSSSDLLCYRA----DQPERLVERQSERWDP 143

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDD-YELAAIDAIAAAAHSLVI 272
           L+ W  +E G + ++       +Q    I      ++K D   ELA++  I     S ++
Sbjct: 144 LIDWAANELGARFILAEGVMHQEQPREAIAAFAVTLRKYDTPLELASLHTITTLTGSAIL 203

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQ 318
           A+    G+L + E   L  L+ED  +++W     GHD +  D R Q
Sbjct: 204 ALAFAEGQLPLAEVWSLAHLDEDWTIEQW-----GHDEEADDRRAQ 244


>gi|295688950|ref|YP_003592643.1| ATP12 ATPase [Caulobacter segnis ATCC 21756]
 gi|295430853|gb|ADG10025.1| ATP12 ATPase [Caulobacter segnis ATCC 21756]
          Length = 241

 Score =  114 bits (285), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 75/211 (35%), Positives = 112/211 (53%), Gaps = 11/211 (5%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+  +    D  NG+ V LD RT K+P+++PL LPTL LA+ I AEWD  Q + I  
Sbjct: 12  KRFYKAAAAVPVD--NGFAVQLDGRTPKSPARKPLVLPTLALAELIAAEWD-AQVEFIDN 68

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
            +MP  +LA TA++RV  TR  +   +      D +  RA    D  + + ERQ ++   
Sbjct: 69  SLMPASRLAFTAIDRVSETRADVAREITAYAASDHLCYRA----DHPTALVERQSREWGA 124

Query: 214 LLKWVESE--FGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLV 271
           +L WV++E    F PV  +      Q D  + TVE L    DD+ L      A    S +
Sbjct: 125 MLDWVKAEHDLSFTPV--AGIIHQPQPDTTLATVEALALTLDDFTLTGTAFAAGLFGSTI 182

Query: 272 IAIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           +A+ +  G+L  + A++L RL+E  Q ++WG
Sbjct: 183 LALAVRAGRLTGQRALDLSRLDEMFQAEQWG 213


>gi|301775511|ref|XP_002923170.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor
           2-like [Ailuropoda melanoleuca]
          Length = 289

 Score =  114 bits (285), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 123/237 (51%), Gaps = 10/237 (4%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+ VS  + +   G+ + LD+R LKTP  +   +P+  LA A+  EWD QQ D I+ 
Sbjct: 47  KRFYQNVSITQGE--GGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWDSQQ-DTIKF 103

Query: 154 FMMPLMKLACTALERVPLTRPK--IIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKI 211
           + M L  L  T+L+  P  R K  +I   +K  + D +  R      L     E Q  + 
Sbjct: 104 YTMHLTTLCNTSLDN-PTQRNKDQLIRAAVKFLDTDTICYRVEEPATLV----ELQKNEW 158

Query: 212 DPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLV 271
           DP+++W E  +  +    +S  G        + + + +   + + L  I+ +     SLV
Sbjct: 159 DPIIEWAEKRYDVEIGSSTSIMGPSIPARTREVLVSHLASYNMWALQGIEFVVTQLKSLV 218

Query: 272 IAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGL 328
           + +G+   +L +E+A+ L RLEE+ Q+ KWG +E  HD ++ +LR + ++ T+F+ L
Sbjct: 219 LTLGLMDLRLTVEQAVLLSRLEEEYQIQKWGNIEWAHDYELQELRARTAAGTLFVHL 275


>gi|58264900|ref|XP_569606.1| hypothetical protein CNC03060 [Cryptococcus neoformans var.
           neoformans JEC21]
 gi|134109621|ref|XP_776925.1| hypothetical protein CNBC4150 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50259605|gb|EAL22278.1| hypothetical protein CNBC4150 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57225838|gb|AAW42299.1| hypothetical protein CNC03060 [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 292

 Score =  114 bits (285), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 124/237 (52%), Gaps = 10/237 (4%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLG--LAKAIGAEWDYQQTDGI 151
           +RF++ V+   A   +G+ + LD+R LKTP    L++P     LA  I  EW+  Q + +
Sbjct: 59  RRFWKTVNI-SATPSDGYLITLDHRALKTPFGAKLEIPKERGLLAALIANEWE-NQDEVL 116

Query: 152 RPFMMPLMKLACTALERVPL--TRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQ 209
           +   +P+  LA  A++ +    TRP +IE L++    D +       +D    +   Q +
Sbjct: 117 KQHALPVTSLASRAIDGLSEGPTRPAVIEALLQYLETDTILY----PDDAPPPLVRLQKK 172

Query: 210 KIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHS 269
             DPL +W++ +FG +  +   F   KQ D  ++ ++ +++  D +ELAA +    A  S
Sbjct: 173 HWDPLYEWLKEDFGVELQLAQGFDAVKQSDDNMEKLKRVVETMDGWELAAFERAVYATKS 232

Query: 270 LVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFL 326
            VIA+ + RG+L   EA +   +E   Q+++WG VE  HD+D  D+R  + SA   L
Sbjct: 233 FVIALALCRGRLTAHEAAQASHVEVSSQIERWGEVEDTHDVDYQDIRRALGSAACLL 289


>gi|407788347|ref|ZP_11135479.1| hypothetical protein B30_19901 [Celeribacter baekdonensis B30]
 gi|407197628|gb|EKE67682.1| hypothetical protein B30_19901 [Celeribacter baekdonensis B30]
          Length = 235

 Score =  114 bits (285), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 70/210 (33%), Positives = 115/210 (54%), Gaps = 7/210 (3%)

Query: 93  GKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIR 152
            KRF++K +T EA +G G+ + LD R ++TP+K PL +PT  LA+ I AEW+ Q+ D I 
Sbjct: 6   AKRFWKK-TTVEAVEG-GFEIRLDGRPVRTPAKAPLIVPTRALAEMIAAEWEAQEGD-ID 62

Query: 153 PFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKID 212
           P  MP  + A  A+++V +   ++   L    + DL+  RA    +L     ERQ ++ D
Sbjct: 63  PNTMPATRSANAAIDKVAIQHAEVANLLADYGDSDLLCYRAAHPRELV----ERQAEQWD 118

Query: 213 PLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVI 272
           P+L W E  FG +    +      QE   ++ +       + +ELAA   + + + SL++
Sbjct: 119 PILDWAEEAFGVRLYPRTGIMHVPQEAAALQVLRAKSHGFNAFELAAFHDLVSLSGSLIL 178

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
            + +  GKL  +EA  L RL+E  Q+++WG
Sbjct: 179 GLAVTHGKLSADEAWMLSRLDELYQIEQWG 208


>gi|281340456|gb|EFB16040.1| hypothetical protein PANDA_012272 [Ailuropoda melanoleuca]
          Length = 246

 Score =  114 bits (285), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 123/237 (51%), Gaps = 10/237 (4%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+ VS  + +   G+ + LD+R LKTP  +   +P+  LA A+  EWD QQ D I+ 
Sbjct: 4   KRFYQNVSITQGE--GGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWDSQQ-DTIKF 60

Query: 154 FMMPLMKLACTALERVPLTRPK--IIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKI 211
           + M L  L  T+L+  P  R K  +I   +K  + D +  R      L     E Q  + 
Sbjct: 61  YTMHLTTLCNTSLDN-PTQRNKDQLIRAAVKFLDTDTICYRVEEPATLV----ELQKNEW 115

Query: 212 DPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLV 271
           DP+++W E  +  +    +S  G        + + + +   + + L  I+ +     SLV
Sbjct: 116 DPIIEWAEKRYDVEIGSSTSIMGPSIPARTREVLVSHLASYNMWALQGIEFVVTQLKSLV 175

Query: 272 IAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGL 328
           + +G+   +L +E+A+ L RLEE+ Q+ KWG +E  HD ++ +LR + ++ T+F+ L
Sbjct: 176 LTLGLMDLRLTVEQAVLLSRLEEEYQIQKWGNIEWAHDYELQELRARTAAGTLFVHL 232


>gi|407783944|ref|ZP_11131134.1| hypothetical protein P24_16897 [Oceanibaculum indicum P24]
 gi|407198946|gb|EKE68971.1| hypothetical protein P24_16897 [Oceanibaculum indicum P24]
          Length = 232

 Score =  114 bits (285), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 82/237 (34%), Positives = 122/237 (51%), Gaps = 8/237 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY++     A DG+   V LD + ++TP+K  + LPT  LA+AI AEW   Q + IRP
Sbjct: 2   KRFYKQAGIASAADGH--RVTLDGKPIRTPAKAEMVLPTAALAEAIAAEWQ-AQAEEIRP 58

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MPL +LA TA++RV   R  +IE L+     DL+   A    DL +    RQV    P
Sbjct: 59  GDMPLTQLAATAIDRVSKERAAVIEELVGYAETDLLCYHAEEPEDLVA----RQVATWQP 114

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           LL W    F     V +     +Q +  +  V   +    D EL A+ ++ A+  SL++A
Sbjct: 115 LLDWANETFEAPFQVTAGIMPARQPEPALIGVRRALDTLSDLELTALASLTASCGSLIVA 174

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGLSR 330
           + +  G++  EEA    +L+E  Q+++WG  E         +R  I +AT+FL L R
Sbjct: 175 LAVRHGRISAEEAFSTSQLDETFQIEQWGEDEEARKRRALLMR-DIEAATLFLSLCR 230


>gi|288958956|ref|YP_003449297.1| chaperone required for the assembly of the mitochondrial F1-ATPase
           [Azospirillum sp. B510]
 gi|288911264|dbj|BAI72753.1| chaperone required for the assembly of the mitochondrial F1-ATPase
           [Azospirillum sp. B510]
          Length = 231

 Score =  114 bits (285), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 73/241 (30%), Positives = 122/241 (50%), Gaps = 16/241 (6%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+     E +   G+ V LD R +++P+K PL LP+  LA+ +  EW   Q + I  
Sbjct: 2   KRFYKAAGVGETE--GGFQVELDGRPVRSPAKAPLVLPSRPLAQGVADEW-AAQGERIDA 58

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MPLM+L+ TA++ +P  RP I+  +      DL+  RA     L     ERQ +   P
Sbjct: 59  HSMPLMQLSSTAIDLIPAKRPDIVGAVSAYAGTDLLCYRAEHPQPLV----ERQARLWQP 114

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           LL W    +     V        Q +  +  +  ++++TDD+ LAA+        S+++A
Sbjct: 115 LLDWAALAYDAPLHVCIGLMPKPQPEEALAALRRVVERTDDWTLAALQTATGVCGSIIVA 174

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDI----ADLRVQISSATVFLGLS 329
           + +  G+L  EEA E+ +L+E  Q+++W     G D +     A++R +I++   F+ L 
Sbjct: 175 LALLEGRLGAEEAFEVSQLDETYQIEQW-----GEDAEATKRRANVRAEIAACRRFVDLL 229

Query: 330 R 330
           R
Sbjct: 230 R 230


>gi|50755603|ref|XP_414815.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor 2
           [Gallus gallus]
          Length = 281

 Score =  114 bits (284), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 122/237 (51%), Gaps = 10/237 (4%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+ VS  + +   G+ + LD+R LKTP  +   +P+  LA A+  EWD Q+ D I+ 
Sbjct: 39  KRFYQNVSISQGE--GGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWDSQK-DTIKF 95

Query: 154 FMMPLMKLACTALERVPLTRPKI--IEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKI 211
           + M L  L  TAL+  P  R K+  I   +K    D V  R     +  + + E Q ++ 
Sbjct: 96  YTMHLTTLCNTALDN-PTQRNKVQLIRAAVKFLETDTVCYRV----EEPAALAELQKKEW 150

Query: 212 DPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLV 271
           DP++ W E  +       +S  G         T  + +   + + L  I+ +     SL+
Sbjct: 151 DPIVAWAEKRYNVAIGSSTSIMGPNIPASTRDTFISHLASYNMWALQGIEYVITQLKSLI 210

Query: 272 IAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGL 328
           +++G+    + +E+A+ L RLEE+ Q+ +WG VE  HD D+ +LR + ++ T+F+ L
Sbjct: 211 LSMGLIDRHITVEKAVLLSRLEEEYQIQRWGNVEWAHDYDLCELRARAAAGTLFVHL 267


>gi|84685383|ref|ZP_01013281.1| hypothetical protein 1099457000258_RB2654_10958 [Maritimibacter
           alkaliphilus HTCC2654]
 gi|84666540|gb|EAQ13012.1| hypothetical protein RB2654_10958 [Rhodobacterales bacterium
           HTCC2654]
          Length = 238

 Score =  114 bits (284), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 77/240 (32%), Positives = 125/240 (52%), Gaps = 10/240 (4%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRF+ K +  +A DG G+TV LD RT++TP+K    +P+  LA+AI  EWD  QTD I P
Sbjct: 7   KRFW-KGTRADACDG-GYTVYLDTRTVRTPAKAAFVVPSRALAEAIAVEWD-AQTDKIDP 63

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP+ + A +A+++V L   ++ + L    + DL   RA    +L +    RQ +  DP
Sbjct: 64  STMPMTRTANSAIDKVRLQHAEVADLLAAYGDSDLTCYRADTPAELVA----RQAEAWDP 119

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           LL W +  FG +           Q+ G +  +  L+   D + LAA   + + + SL+IA
Sbjct: 120 LLDWADKTFGARLEPRIGIMHAPQDPGALTRLGALVHDLDPFRLAAFHDLVSLSGSLIIA 179

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQ-ISSATVFLGLSRRN 332
           + +  G++  E    + R++E+ Q + WG  E     + A L+ Q    A +F  L+ +N
Sbjct: 180 LAVMHGRIDPETGWAISRIDENWQAELWG--EDEEATEHAALKRQAFLDAALFFRLADQN 237


>gi|426200533|gb|EKV50457.1| hypothetical protein AGABI2DRAFT_200172 [Agaricus bisporus var.
           bisporus H97]
          Length = 297

 Score =  114 bits (284), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 77/243 (31%), Positives = 124/243 (51%), Gaps = 11/243 (4%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLG--LAKAIGAEWDYQQTDGI 151
           KRF++KV   +   G+   V LD R LKTP   PL +P+    LA  I AEWD+Q T  I
Sbjct: 61  KRFWKKVDIEKR--GDSLAVTLDTRPLKTPLGTPLFVPSSKDLLATLIAAEWDHQTT-LI 117

Query: 152 RPFMMPLMKLACTALERV--PLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQ 209
           +P  +P+  LA  A++ +    TR ++ E L+   + D + C      D T  +   Q +
Sbjct: 118 KPHALPMTSLASRAIDGMSDASTRAEVQETLLNYLDTDTI-CFW---EDSTPQLERLQAE 173

Query: 210 KIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHS 269
             DPL +WVE  F  +    +S    +Q       + N++K  D +++AA++       S
Sbjct: 174 HWDPLFEWVEKTFAVQLSKNTSILFNEQPRDTRVKLGNVLKNFDQWQMAAMERATYTTKS 233

Query: 270 LVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGLS 329
            +IA+ +    L  E+A     +E + Q+++WG VE  HD+D  D+R  +SSA + L  S
Sbjct: 234 FIIALALVFRSLTPEQAALAASVEVNSQIERWGEVEDTHDVDYHDVRRHLSSAALLLCNS 293

Query: 330 RRN 332
            ++
Sbjct: 294 SKD 296


>gi|149758235|ref|XP_001489232.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor
           2-like [Equus caballus]
          Length = 289

 Score =  114 bits (284), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 123/237 (51%), Gaps = 10/237 (4%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+ VS  + +   G+ + LD+R LKTP  +   +P+  LA A+  EWD QQ D I+ 
Sbjct: 47  KRFYQNVSITQGE--GGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWDSQQ-DTIKF 103

Query: 154 FMMPLMKLACTALERVPLTRPK--IIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKI 211
           + M L  L  T+L+  P  R K  +I   +K  + D +  R      L     E Q  + 
Sbjct: 104 YTMHLTTLCNTSLDN-PTQRNKDQLIRAAVKFLDTDTICYRVEEPETLV----ELQKNEW 158

Query: 212 DPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLV 271
           DP+++W E  +G +    +S  G        + + + +   + + L  I+ +     S+V
Sbjct: 159 DPVIEWAEKRYGVEIGSSTSIMGPSIPARTQEVLISHLASYNMWALQGIEFVVTQLKSMV 218

Query: 272 IAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGL 328
           + +G+   +L +E+A+ L RLEE+ Q+ KWG +E  HD ++ +LR + ++  +F+ L
Sbjct: 219 LTLGLIDLRLTVEQAVLLSRLEEEYQIQKWGNIEWAHDYELQELRARTAAGALFVHL 275


>gi|393238522|gb|EJD46058.1| ATP12-domain-containing protein [Auricularia delicata TFB-10046
           SS5]
          Length = 280

 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 118/237 (49%), Gaps = 11/237 (4%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLG--LAKAIGAEWDYQQTDGI 151
           KRF++    +E    + + + LD R LKTP    L++P     LA  I  EWD Q+   I
Sbjct: 48  KRFWKDADLQE--QSHAYHITLDKRPLKTPGGNVLEIPKTKRLLATMIAYEWDNQEK-LI 104

Query: 152 RPFMMPLMKLACTALE--RVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQ 209
           +P  +PL  LA  A++  +   TR ++ E L+K  + D +        +   G+ + Q Q
Sbjct: 105 KPHALPLTSLAARAIDDMQSEKTRAEVREALLKYLDTDSICFH----EEEPLGLVQLQAQ 160

Query: 210 KIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHS 269
              PLL W  +EF  +  V++  FG        K    ++ + D ++L A++    ++ S
Sbjct: 161 HWQPLLDWARAEFDAEIRVFTGLFGSSHPPETHKKFAEVLSRLDPWQLTALERAVYSSKS 220

Query: 270 LVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFL 326
           L+IA+ +  G+L  E+A +   +E   QV +WG VE  HD+D  D+R Q+ S    L
Sbjct: 221 LIIALALVLGRLNPEQAAQAAHVEVSSQVQRWGEVEDSHDVDFQDIRRQLGSVACLL 277


>gi|89070523|ref|ZP_01157812.1| hypothetical protein OG2516_08316 [Oceanicola granulosus HTCC2516]
 gi|89043830|gb|EAR50028.1| hypothetical protein OG2516_08316 [Oceanicola granulosus HTCC2516]
          Length = 236

 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 79/241 (32%), Positives = 120/241 (49%), Gaps = 12/241 (4%)

Query: 93  GKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIR 152
            KRF+   +   A+ G+G+ V LD R ++TP+K PL LPT  LA+ + AEWD QQ + I 
Sbjct: 6   AKRFW--TAAHVAERGDGFAVTLDDRPVRTPAKAPLTLPTRALAEGVAAEWDAQQ-EQID 62

Query: 153 PFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKID 212
           P  MPL + A  AL++V     ++   +      DL+  RA A   L +    RQ +  D
Sbjct: 63  PLSMPLTRAANAALDKVAPQFDEVAAMVADYGGTDLLCYRADAPEALVA----RQAEAWD 118

Query: 213 PLLKWVESEFG--FKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSL 270
           PLL W     G   +P V       +Q+ G +  +E  ++  D + L A   + A + SL
Sbjct: 119 PLLDWAADTLGARLRPAV--GVMHVEQDPGALLRLEGQVRALDPFRLTAFADLVALSGSL 176

Query: 271 VIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGLSR 330
           VIA  +  G    E+   L R++E+ Q+++WG  +       A  R    +A  FL L+R
Sbjct: 177 VIAFAVLEGARTPEDGWALSRIDEEWQIEQWGEDDEASAF-AARKRADFLAAARFLRLAR 235

Query: 331 R 331
           R
Sbjct: 236 R 236


>gi|294951335|ref|XP_002786929.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
 gi|239901519|gb|EER18725.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
          Length = 247

 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 111/239 (46%), Gaps = 17/239 (7%)

Query: 94  KRFYE--KVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGI 151
           KRFY+  KV+    ++G GWTV+LD + L TP+K  L LP+ GLA A+  EW  +Q   I
Sbjct: 22  KRFYDVVKVARNGIEEGGGWTVLLDGKRLSTPAKHRLALPSEGLAFAVAEEWA-EQDKFI 80

Query: 152 RPFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKI 211
           RP  MPLM LA T ++        ++E  +   N DL             G +   V+  
Sbjct: 81  RPHFMPLMALAATTIDLTAKDMSTVVERNLHYLNTDLT----------CYGEYPEWVE-- 128

Query: 212 DPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLV 271
                +V  EF  K          K  +G    +   +     +EL A D ++  A S+V
Sbjct: 129 --YRSFVSKEFDCKIASCRGISLPKHSEGADAALRAYLSTLTPWELTAFDEMSRTAKSVV 186

Query: 272 IAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGLSR 330
           IA+  + G   +EEA     LEE     KWG VEG HD+    L++ + +A  F   SR
Sbjct: 187 IALNYYLGNTSLEEACRASVLEELDNRGKWGTVEGDHDVSDRTLKMAMGAAKFFAEESR 245


>gi|405123249|gb|AFR98014.1| ATP synthase mitochondrial F1 complex assembly factor 2
           [Cryptococcus neoformans var. grubii H99]
          Length = 292

 Score =  113 bits (282), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 123/237 (51%), Gaps = 10/237 (4%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLG--LAKAIGAEWDYQQTDGI 151
           +RF++ V+   A   +G+ + LD+R LKTP    L++P     LA  I  EW+  Q + +
Sbjct: 59  RRFWKTVNI-SATPSDGYLITLDHRALKTPFGAKLEIPKERRLLAALIANEWE-NQDEVL 116

Query: 152 RPFMMPLMKLACTALERVP--LTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQ 209
           +   +P+  LA  A++ +    TRP +I+ L+K    D +       +D    +   Q +
Sbjct: 117 KQHALPVTSLASRAIDGLSEGPTRPAVIDALLKYLETDTILY----PHDAPPPLVRLQKE 172

Query: 210 KIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHS 269
             DPL KW++ +FG +  +   F   K  D  ++ ++ +++  D +ELAA +    A  S
Sbjct: 173 HWDPLYKWLKEDFGVELQLAQGFGAVKLSDENMEKLKKVVETMDGWELAAFERAVYATKS 232

Query: 270 LVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFL 326
            VIA+ + RG+L   EA +   +E   Q+++WG VE  HD+D  D+R  + SA   L
Sbjct: 233 FVIALALCRGRLTAHEAAQASHVEVSSQIERWGEVEDTHDVDYQDIRRALGSAACLL 289


>gi|345310248|ref|XP_001520540.2| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor
           2-like [Ornithorhynchus anatinus]
          Length = 289

 Score =  113 bits (282), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 75/241 (31%), Positives = 123/241 (51%), Gaps = 18/241 (7%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           K+FY+ VS    +   G+ + LD+R L+TP  +   +P+  LA A+  EWD QQ D I+ 
Sbjct: 47  KKFYQNVSITRGE--GGFEINLDHRKLRTPQAKLFTVPSEALAIAVATEWDSQQ-DTIKF 103

Query: 154 FMMPLMKLACTALERVPLTRPK--IIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKI 211
           + M L  L  T+L+  P  R K  +I   +K  + D V  R      L     E Q  + 
Sbjct: 104 YTMHLTTLCNTSLDN-PSQRSKDQLIRAAVKFLDTDTVCYRVEEPETLV----ELQKNEW 158

Query: 212 DPLLKWVESEFGFKPVVYSSFFG----GKQEDGLIKTVENLMKKTDDYELAAIDAIAAAA 267
           DP+++W E  +  +    +S  G     K  D  I  + +     + + L  I+ +    
Sbjct: 159 DPIVEWAEKRYNVQIGSSTSILGPSIPAKTRDVFISHLASY----NMWALQGIEFVITQL 214

Query: 268 HSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLG 327
            S+V+++G+    L +EEA+ L RLEE+ Q+ KWG VE  HD ++ +LR + ++ T+F+ 
Sbjct: 215 KSMVLSLGLIDRHLTVEEAVLLSRLEEEYQIQKWGNVEWAHDYELHELRARTAAGTLFVH 274

Query: 328 L 328
           L
Sbjct: 275 L 275


>gi|390352014|ref|XP_003727794.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor
           2-like [Strongylocentrotus purpuratus]
          Length = 300

 Score =  113 bits (282), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 117/236 (49%), Gaps = 7/236 (2%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+ VS  ++     + + LD R LKTPS +PL +PT  LA A+  EWD Q  + I+ 
Sbjct: 57  KRFYKNVSITQSG-SKAFEINLDQRKLKTPSGQPLVIPTESLAVAVATEWDTQH-EFIKQ 114

Query: 154 FMMPLMKLACTALER-VPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKID 212
             M L  L  T L+     T+ +II  ++     D +  R     +L +     Q +K +
Sbjct: 115 HSMHLTALCNTVLDNPTHRTKAQIIRAMLHFLETDTICYRLEDPPELVA----MQDEKWE 170

Query: 213 PLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVI 272
           P+L W+  ++       +S  G        + +E+ ++   D+ L   +       SLV+
Sbjct: 171 PMLDWINKKYEVDINSTTSITGPVIPQETYRNLEHHLETHSDWALVGYENAIECLKSLVL 230

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGL 328
              +   ++ +EEA  L RLE + Q+DKWG VE  HD + AD + ++++A +F  L
Sbjct: 231 TFALMDREITVEEAASLSRLETEFQIDKWGSVEWAHDTEFADTKSRVAAAVLFTHL 286


>gi|326929025|ref|XP_003210672.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor
           2-like [Meleagris gallopavo]
          Length = 307

 Score =  113 bits (282), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 71/238 (29%), Positives = 122/238 (51%), Gaps = 10/238 (4%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+ VS  + +   G+ + LD+R LKTP  +   +P+  LA A+  EWD Q+ D I+ 
Sbjct: 65  KRFYQNVSISQGE--GGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWDSQK-DTIKF 121

Query: 154 FMMPLMKLACTALERVPLTRPKI--IEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKI 211
           + M L  L  TAL+  P  R K+  I   +K    D +  R     +  + + E Q ++ 
Sbjct: 122 YTMHLTTLCNTALDN-PTQRNKVQLIRAAVKFLETDTLCYRV----EEPAALAELQKKEW 176

Query: 212 DPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLV 271
           DP++ W E  +       +S  G         T  + +   + + L  I+ +     SL+
Sbjct: 177 DPIVAWAEKRYNVAIGSSTSIMGPNISASTRDTFISHLASYNMWALQGIEYVITQLKSLI 236

Query: 272 IAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGLS 329
           +++G+    + +E+A+ L RLEE+ Q+ +WG VE  HD D+ +LR + ++ T+F+ L 
Sbjct: 237 LSMGLIDRHITVEKAVLLSRLEEEYQIQRWGNVEWAHDYDLCELRARAAAGTLFVHLC 294


>gi|145547238|ref|XP_001459301.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124427125|emb|CAK91904.1| unnamed protein product [Paramecium tetraurelia]
          Length = 266

 Score =  113 bits (282), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 79/246 (32%), Positives = 133/246 (54%), Gaps = 21/246 (8%)

Query: 94  KRFYEK----VSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTD 149
           KRFY++    ++T   +  + W V LD +T+KTPSK  L +P+  LA  I  E++ Q T+
Sbjct: 23  KRFYKEATIEMATNPTNPYHQWLVKLDGKTVKTPSKNTLAVPSPQLASFIAHEFNMQ-TE 81

Query: 150 GIRPFMMPLMKLACTAL--ERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQ 207
            IRP  MPL+ LA  A+  E     R  + + ++    +D V  R   D  L    ++ Q
Sbjct: 82  FIRPTTMPLLTLARNAIDIEADDRIRQFMEQSVISYLERDTVLFRENPDTKL----YKIQ 137

Query: 208 VQKIDPLLKWVESEFGFKPVVYSSFFGG-----KQEDGLIKTVENLMKKTDDYELAAIDA 262
            +K+DP L+    +FG       + FG      KQ D +   +E ++ + ++++L ++DA
Sbjct: 138 KEKLDPQLQIFNEKFGLH---LKTNFGLNIEPLKQYDQI--RIETIVGELNNWQLVSLDA 192

Query: 263 IAAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSA 322
                 S ++A+ I+   L++EEA+ L RLEED Q+ ++G VEG HD D   + + +S++
Sbjct: 193 KVENLKSCILALLIWNNHLEVEEAVRLSRLEEDFQIAQFGKVEGHHDFDENTIMMNVSAS 252

Query: 323 TVFLGL 328
            +F  L
Sbjct: 253 KLFAQL 258


>gi|353237289|emb|CCA69265.1| related to ATP12-F1F0-ATPase complex assembly protein
           [Piriformospora indica DSM 11827]
          Length = 281

 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/273 (28%), Positives = 131/273 (47%), Gaps = 14/273 (5%)

Query: 58  KINESIYIKGRKQETASSSSSSVTMPMSFMTGSIVGKRFYEKVSTREADDGNGWTVMLDY 117
           +IN     + R   TAS     VT      T     KRF+     R+ DD     V LD 
Sbjct: 16  RINFHNAFRPRLYATASQDIPPVTQTNRAQTSM---KRFWNAAHVRQGDDYI--EVTLDG 70

Query: 118 RTLKTPSKRPLKLPTLG--LAKAIGAEWDYQQTDGIRPFMMPLMKLACTALERVPLT--R 173
           R LKTP    L++P     LA  I  EWD Q T  ++   +PL  +A  A++ +     R
Sbjct: 71  RALKTPGGNKLRVPASKKVLATLIANEWDVQDT-ILKAHALPLTSIASRAIDGLSTAEER 129

Query: 174 PKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDPLLKWVESEFGFKPVVYSSFF 233
             + E+L+K F+ D + C    + +  + + E   Q  +P+L+W   E G   +++ S  
Sbjct: 130 LAVTENLLKYFDTDTI-CYHEEEPEQLARLQE---QHWNPILEWARKEIGLDVLLFDSLL 185

Query: 234 GGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIRLE 293
            G Q     + + +++ + D + +AA +       S +IA+ + +G+L +++A +   +E
Sbjct: 186 IGNQSADSKQQLRSIVNQFDAWSMAAFERAVYTTKSALIALALVKGRLNVDQAAQAAHVE 245

Query: 294 EDLQVDKWGLVEGGHDIDIADLRVQISSATVFL 326
            + Q+++WG VE  HD+D  D+R Q+ S    L
Sbjct: 246 VNSQIERWGEVEDSHDVDYQDIRQQLGSVACVL 278


>gi|130486179|ref|NP_001076290.1| ATP synthase mitochondrial F1 complex assembly factor 2 [Danio
           rerio]
 gi|126632152|gb|AAI34168.1| Atpaf2 protein [Danio rerio]
 gi|157422746|gb|AAI53514.1| ATP synthase mitochondrial F1 complex assembly factor 2 [Danio
           rerio]
          Length = 291

 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 120/237 (50%), Gaps = 7/237 (2%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           K+FYE VS  + + G  + + LD R LKTPS +   +P   LA A+  EWD Q+ D ++ 
Sbjct: 48  KKFYETVSITQGE-GGLFEINLDKRKLKTPSGKLFTVPNEALAIAVANEWDVQK-DTLKF 105

Query: 154 FMMPLMKLACTALER-VPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKID 212
           + M L  L  TAL+     T+ ++I   +K    D +  R     +   G+ E Q  + D
Sbjct: 106 YTMHLTTLCNTALDNPTQRTKEQMISAALKFLETDTICYRV----EEPPGLVELQTNEWD 161

Query: 213 PLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVI 272
           P++ W+E  +       S+  G +  +   +T    +   + + L  ++ +     SLV+
Sbjct: 162 PVMNWIEQRYNVVIGSSSNIMGPQIPEETKETFHQHLNSFNFWSLTGLEFVINQLKSLVL 221

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGLS 329
           +  +    L +EEA+ L RLEE+ Q+  WG VE  HD D+ +LR + ++  +F+ LS
Sbjct: 222 SFALIDRHLNVEEAVLLSRLEEEYQIRSWGNVEWVHDYDMYELRARTAAGALFVHLS 278


>gi|345800104|ref|XP_546658.2| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor 2
           [Canis lupus familiaris]
          Length = 257

 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 122/237 (51%), Gaps = 10/237 (4%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+ VS  + +   G+ + LD+R LKTP  +   +P+  LA A+  EWD QQ D I+ 
Sbjct: 15  KRFYQNVSITQGE--GGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWDSQQ-DTIKF 71

Query: 154 FMMPLMKLACTALERVPLTRPK--IIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKI 211
           + M L  L  T+L+  P  R K  +I   +K  + D +  R      L     E Q  + 
Sbjct: 72  YTMHLTTLCNTSLDN-PTQRNKDQLIRAAVKFLDTDTICYRVEEPATLV----ELQKNEW 126

Query: 212 DPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLV 271
           DP+++W E  +  +    +S  G        + + + +   + + L  I+ +     S+V
Sbjct: 127 DPIIEWAEKRYDVEIGSSTSIMGPSIPARTREVLISHLASYNMWALQGIEFVVTQLKSMV 186

Query: 272 IAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGL 328
           + +G+    L +E+A+ L RLEE+ Q+ KWG +E  HD ++ +LR + ++ T+F+ L
Sbjct: 187 LTLGLMDLHLTVEQAVLLSRLEEEYQIQKWGNIEWAHDYELQELRARTAAGTLFIHL 243


>gi|344298048|ref|XP_003420706.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor
           2-like [Loxodonta africana]
          Length = 289

 Score =  112 bits (280), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 125/238 (52%), Gaps = 10/238 (4%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+ VS  + +   G+ + LD+R LKTP  +   +P+  LA A+  EWD QQ D I+ 
Sbjct: 47  KRFYQNVSITQGE--GGFEINLDHRKLKTPQAKLFTVPSEALATAVATEWDSQQ-DTIKF 103

Query: 154 FMMPLMKLACTALERVPLTRPK--IIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKI 211
           + M L  L  T+L+  P  R K  +I+  +K  + D +  R      L     E Q  + 
Sbjct: 104 YTMHLTTLCNTSLDN-PTQRSKDQLIQAALKFLDTDTICYRVEEPETLV----ELQKNEW 158

Query: 212 DPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLV 271
           DP+++W E  +G +    +S  G        + + + +   + + L  I+ + A   S+V
Sbjct: 159 DPIIEWAEKRYGVEIGTSTSIMGPNIPAKTYEALASHLASYNMWALQGIEFVVAQLKSMV 218

Query: 272 IAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGLS 329
           + +G+   +L +E+A+ L RLEE+ Q+ KWG +E  HD ++ +LR + ++  +F+ L 
Sbjct: 219 LTLGLIDLRLTVEQAVLLSRLEEEYQIQKWGNIEWAHDYELQELRARAAAGALFVHLC 276


>gi|222086087|ref|YP_002544619.1| hypothetical protein Arad_2518 [Agrobacterium radiobacter K84]
 gi|221723535|gb|ACM26691.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
          Length = 261

 Score =  112 bits (280), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 72/226 (31%), Positives = 117/226 (51%), Gaps = 13/226 (5%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+ V  RE +DG+   + LD + +KTP++R L +PT  LAK + AEW  +Q + I P
Sbjct: 31  KRFYKDVGIREGEDGH--VIELDGKVVKTPARRSLAVPTEALAKLVAAEW-ARQVEIIDP 87

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
            +MP+ +L  TAL+ V      + E +++  + DL+  RA    D    + ERQ ++ DP
Sbjct: 88  TVMPVTRLVNTALDGVATDPQAVFEDILRFSSSDLLCYRA----DQPERLVERQSERWDP 143

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDD-YELAAIDAIAAAAHSLVI 272
           L+ W  +E G + ++       +Q    I      ++K D   ELA++  I     S ++
Sbjct: 144 LIDWAANELGARFILAEGVMHQEQPREAIAAFAVTLRKYDTPLELASLHTITTLTGSAIL 203

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQ 318
           A+    G+L + E   L  L+ED  +++W     GHD +    R Q
Sbjct: 204 ALAFAEGQLSLAEVWSLAHLDEDWTIEQW-----GHDEEADHRRAQ 244


>gi|347739550|ref|ZP_08870796.1| Chaperone [Azospirillum amazonense Y2]
 gi|346917123|gb|EGX99602.1| Chaperone [Azospirillum amazonense Y2]
          Length = 222

 Score =  112 bits (280), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 98/194 (50%), Gaps = 5/194 (2%)

Query: 109 NGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRPFMMPLMKLACTALER 168
            GW V LD R LK+P+K  L LPT  LA+A+ AEWD Q  D + P  MP+M+LA T ++R
Sbjct: 6   GGWQVQLDARILKSPAKADLVLPTEALARAVAAEWDAQ-GDTVMPDSMPMMQLASTCVDR 64

Query: 169 VPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDPLLKWVESEFGFKPVV 228
           V   R  I+         DL+  RA     L     ERQ +   PLL W    +      
Sbjct: 65  VGPQRATILAGAAAYGGTDLLCYRAAEPAKLA----ERQARGWQPLLDWAALRYDALLQT 120

Query: 229 YSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIE 288
            +      Q+   +  ++  ++  DD++L  +    A   SLV+ + +F G++  ++A E
Sbjct: 121 TTGIMHRAQDPVALNALKRALEALDDWQLTGVQNAVALTGSLVLGLALFEGRIDADQAFE 180

Query: 289 LIRLEEDLQVDKWG 302
           L  L+E  Q+++WG
Sbjct: 181 LAELDESFQIEQWG 194


>gi|430003656|emb|CCF19445.1| conserved protein of unknown function [Rhizobium sp.]
          Length = 262

 Score =  112 bits (280), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 69/211 (32%), Positives = 109/211 (51%), Gaps = 8/211 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY++VS  E  D  G+ ++LD R ++TP+K PL  PT  LA+ +  EWD Q  + + P
Sbjct: 30  KRFYKQVSVGE--DEGGYAILLDGRPVRTPAKNPLIAPTAALAELMRVEWDAQD-EFVDP 86

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP+ KL  TA++ V L    + E +++    DL+  RA A  +L +    RQ ++ DP
Sbjct: 87  QTMPVTKLVNTAIDGVALDPQAVFEDILRFSASDLLCYRADAPEELVA----RQCERWDP 142

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDD-YELAAIDAIAAAAHSLVI 272
           L+ W  SE G + ++       +Q           ++K D   ELA +  +     S ++
Sbjct: 143 LIDWAASELGARFILIEGIMPQEQPREATSAFAVTLRKYDSPIELACLHTVTTLTGSAIL 202

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWGL 303
           A+    G+L  EEA  L  L+ED   + WG+
Sbjct: 203 ALAFAEGRLSAEEAWSLAHLDEDWTEEHWGV 233


>gi|83950494|ref|ZP_00959227.1| hypothetical protein ISM_05330 [Roseovarius nubinhibens ISM]
 gi|83838393|gb|EAP77689.1| hypothetical protein ISM_05330 [Roseovarius nubinhibens ISM]
          Length = 236

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 120/239 (50%), Gaps = 8/239 (3%)

Query: 93  GKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIR 152
            +RF++  S   A+DG  +TV LD R ++TP+KR L LPT  LA+ + AEW  Q  + I 
Sbjct: 6   ARRFWKDSSVESAEDG--FTVHLDGRPVRTPAKRSLILPTEALAQEVAAEWQAQDEE-IN 62

Query: 153 PFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKID 212
           P  MP  + A  A+++V + + ++ E +    + DL+  RA +  +L     ERQ    D
Sbjct: 63  PLSMPFTRSANAAIDKVAVQKDEVAEMIAAYGDSDLLCYRADSPTELV----ERQSAAWD 118

Query: 213 PLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVI 272
           P L W ES+   + V  +      Q    +  +   +   D Y L A+  + + + SLV+
Sbjct: 119 PYLDWAESDLSARLVPVAGVVHQPQNPAAVAALRAEVMAQDIYALTALHDLVSLSGSLVL 178

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGLSRR 331
            +   RG    E    L RL+ED Q+++WG  E   ++     R  + +A ++  LSRR
Sbjct: 179 GLAAQRGIAPPETLWTLSRLDEDWQIEQWGEDEEASELAATKQRAFLHAARLY-QLSRR 236


>gi|84515666|ref|ZP_01003027.1| hypothetical protein SKA53_13491 [Loktanella vestfoldensis SKA53]
 gi|84510108|gb|EAQ06564.1| hypothetical protein SKA53_13491 [Loktanella vestfoldensis SKA53]
          Length = 241

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 114/212 (53%), Gaps = 7/212 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRF+ K +T +A DG G+TV LD R +KTP+K  L +PTL LA+A+  EWD  QT  + P
Sbjct: 7   KRFW-KAATPQACDG-GFTVTLDGRPVKTPAKAALIVPTLPLAEAVAQEWD-AQTGLVDP 63

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP+ + A  A+++V   R ++I  L +    DL+  RAPA +    G+  RQ Q  DP
Sbjct: 64  RTMPVTRSANAAIDKVRTQRAEVIGLLSEYGGSDLLCYRAPAPD----GLVMRQRQVWDP 119

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           LL W   + G    +        Q    +  ++  +   DD+ LAA   + + + SL++A
Sbjct: 120 LLDWAARDLGVTLTIGEGVVPVPQPAESLDILQRELDYVDDFGLAAAHDLISLSGSLILA 179

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWGLVE 305
             + R  L    A ++ R++ED Q  +WG+ E
Sbjct: 180 FAVMRRHLDAARAWDVSRVDEDWQTSQWGVDE 211


>gi|145510604|ref|XP_001441235.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124408474|emb|CAK73838.1| unnamed protein product [Paramecium tetraurelia]
          Length = 266

 Score =  112 bits (279), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 79/246 (32%), Positives = 128/246 (52%), Gaps = 21/246 (8%)

Query: 94  KRFYEKVSTR----EADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTD 149
           KRFY+ V       EAD    W V LD +T+KTPSK  L +PT  LA+ I  E+   Q +
Sbjct: 23  KRFYKDVKIEMAFGEADPYRQWLVKLDGKTVKTPSKNELSIPTPQLAQRIADEFS-AQAE 81

Query: 150 GIRPFMMPLMKLACTALE-RVPLTRPKIIEH-LMKKFNQDLVFCRAPADNDLTSGVHERQ 207
            I P  MPLM LA  A++        + +EH ++    +D V  R  + ++L    ++ Q
Sbjct: 82  FINPATMPLMTLARNAVDIEADENMREFMEHSIISYLERDTVLFREQSHSEL----YQIQ 137

Query: 208 VQKIDPLLKWVESEFGFKPVVYSSFFGG-----KQEDGLIKTVENLMKKTDDYELAAIDA 262
           +QK+DP LK    +FG       + FG      KQ D +   +E ++K+ + ++L  +D+
Sbjct: 138 MQKLDPQLKLFNQKFGMH---LKANFGLDVEPLKQYDQI--RIETILKELNSWQLVCLDS 192

Query: 263 IAAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSA 322
                 S ++A  I+  ++ ++EA++L R+EED Q+   G +EG HD D   +   + +A
Sbjct: 193 KVENLKSCILAFQIWNNQIDVQEAVKLSRIEEDYQISLNGKIEGHHDFDEETILANVKAA 252

Query: 323 TVFLGL 328
            +F  L
Sbjct: 253 KLFSQL 258


>gi|388852802|emb|CCF53487.1| related to ATP12-F1F0-ATPase complex assembly protein [Ustilago
           hordei]
          Length = 273

 Score =  112 bits (279), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 123/257 (47%), Gaps = 10/257 (3%)

Query: 73  ASSSSSSVTMPMSFMTGSIVGKRFYEKVS-TREADDGNGWTVMLDYRTLKTPSKRPLKLP 131
           A SSSS      +      +  RF++ VS  R     +G+ ++LD R ++TPS +P+ +P
Sbjct: 17  AFSSSSCTLEEATLNRAERLKSRFWKSVSLQRPTSCSDGFQILLDNRCIRTPSGQPIVIP 76

Query: 132 TLG--LAKAIGAEWDYQQTDGIRPFMMPLMKLACTALE--RVPLTRPKIIEHLMKKFNQD 187
                LA  I  EW  +Q   ++P  +PL  LA  ALE  R    R  I   L++    +
Sbjct: 77  KERELLATCIAQEWS-EQKQLLKPHTLPLTSLAARALEGCRHAGERKAIEGALIRYLENE 135

Query: 188 LVFCRAPADNDLTSGVHERQVQKIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVEN 247
            V  +      L     E Q Q   PLL ++ S +      ++   GG    G ++T  +
Sbjct: 136 TVCFQESQPKSLV----ELQTQHWTPLLSYINSTYNTSITPFTGLLGGAHAPGTLETFCS 191

Query: 248 LMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGG 307
            + K D ++LAA +     + S +I++ +  G L +E+A +   +E   Q+++WG V+  
Sbjct: 192 HLTKLDPFDLAAFERSVMLSKSFLISLALVSGHLNVEQAAQAAEVEVQSQINRWGAVQDS 251

Query: 308 HDIDIADLRVQISSATV 324
           HD+D AD+R  + S  +
Sbjct: 252 HDVDQADIRRTLGSVAI 268


>gi|406923073|gb|EKD60333.1| ATP12 ATPase [uncultured bacterium]
          Length = 235

 Score =  112 bits (279), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 71/211 (33%), Positives = 116/211 (54%), Gaps = 7/211 (3%)

Query: 93  GKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIR 152
            KRF+ K +  EA DG G+TV LD R +KTP++R L LP++ +A+AI AEWD QQ   ++
Sbjct: 6   AKRFW-KQAVAEACDG-GFTVKLDGRAVKTPARRALVLPSVAMAQAIAAEWDAQQ-GLVK 62

Query: 153 PFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKID 212
           P  MP+ + A +AL++V     ++ + L      DL+  RA    +L +    RQ    D
Sbjct: 63  PDTMPVTRAANSALDKVSEQFAEVADLLAAYGASDLLCYRATGPAELIA----RQAAAWD 118

Query: 213 PLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVI 272
           PLL W  +      +         Q +  I  +  L+     ++LAA+  + A + SLV+
Sbjct: 119 PLLDWSATALNAPLLSTEGVVHIAQPEASIARLSALVHGFTPFQLAAVHDLIAISGSLVL 178

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWGL 303
           A+ + RG++ +E+A +L R++E  Q + WG+
Sbjct: 179 ALAVTRGRISVEQAWDLSRIDETWQNELWGV 209


>gi|224070283|ref|XP_002188414.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor 2
           [Taeniopygia guttata]
          Length = 255

 Score =  111 bits (278), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 119/237 (50%), Gaps = 10/237 (4%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+ VS  + +   G+ + LD+R LKTP  +   +P+  LA A+  EWD Q+ D I+ 
Sbjct: 13  KRFYQNVSISQGE--GGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWDSQK-DTIKF 69

Query: 154 FMMPLMKLACTALERVPLTRPK--IIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKI 211
           + M L  L  TAL+  P  R K  +I   +K    D V  R      L     E Q  + 
Sbjct: 70  YTMHLTTLCNTALDN-PTQRNKTQLIRAAVKFLETDTVCYRVEEPPALA----ELQKNEW 124

Query: 212 DPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLV 271
           DP++ W E  +       +S  G        +T  + +   + + L  I+ +     SL+
Sbjct: 125 DPVIAWAEQRYNVTIGSSTSILGPNIPASTKETFVSHLASYNMWALQGIEFVITQLKSLI 184

Query: 272 IAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGL 328
           +++ +    + +E+A+ L RLEE+ Q+ +WG VE  HD D+ +LR + ++ T+F+ L
Sbjct: 185 LSMSLIDRHITVEKAVLLSRLEEEYQIRRWGNVEWAHDYDLCELRARTAAGTLFVHL 241


>gi|449543527|gb|EMD34503.1| hypothetical protein CERSUDRAFT_125608 [Ceriporiopsis subvermispora
           B]
          Length = 286

 Score =  111 bits (278), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 77/267 (28%), Positives = 131/267 (49%), Gaps = 22/267 (8%)

Query: 65  IKGRKQETASSSSSSVTMPMSFMTGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPS 124
           I   +Q  A+++ + VT+           KRF++ V     D  NG  + LD R L+TP 
Sbjct: 36  IATSEQAAAATNRAEVTL-----------KRFWKSVGIESRD--NGLAITLDKRPLRTPG 82

Query: 125 KRPLKLPTLG--LAKAIGAEWDYQQTDGIRPFMMPLMKLACTALERV--PLTRPKIIEHL 180
            +PL LP     +A  I  EW+ Q+T  ++P  +P+  LA  A++      +R ++   L
Sbjct: 83  GKPLLLPQHKRLVAALIATEWENQET-LLKPHALPVTSLASRAIDAFTDEKSRSEVRSLL 141

Query: 181 MKKFNQDLVFCRAPADNDLTSGVHERQVQKIDPLLKWVESEFGFKPVVYSSFFGGKQEDG 240
           +K  + D + C   ++ D    + E   +   PLL+W  SEFG       S     Q   
Sbjct: 142 LKYLDTDTI-CYHESEPDALVTLQEAHWK---PLLEWACSEFGVDIQTSDSLLFTSQPPE 197

Query: 241 LIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDK 300
            ++  + +M + D +E+AAI+     + S +IA+ + +G++  E+A     +E + Q+ +
Sbjct: 198 TLQKFDKVMAEFDQWEMAAIERATYTSKSFLIALALVKGRISAEDAALASHVEVNSQIKR 257

Query: 301 WGLVEGGHDIDIADLRVQISSATVFLG 327
           WG VE  HD+D  D+R Q+ SA   L 
Sbjct: 258 WGEVEDSHDVDHHDVRRQLGSAACILS 284


>gi|381167035|ref|ZP_09876247.1| Chaperone required for the assembly of the mitochondrial F1-ATPase
           [Phaeospirillum molischianum DSM 120]
 gi|380683850|emb|CCG41059.1| Chaperone required for the assembly of the mitochondrial F1-ATPase
           [Phaeospirillum molischianum DSM 120]
          Length = 236

 Score =  111 bits (277), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 74/209 (35%), Positives = 106/209 (50%), Gaps = 7/209 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           +RFYE  S  E++   G+ V LD R ++TP  R L +P   LA+A+ AEWD  Q + I P
Sbjct: 7   RRFYEAASAAESE--GGFAVHLDGRPVRTPGGRFLLVPARPLAEAVAAEWD-AQVETILP 63

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MPL +L+ TAL+RV   R  I  +LM     DL+  RA A  DL      RQ ++  P
Sbjct: 64  STMPLTQLSSTALDRVAPERETITGYLMAYAGTDLLCYRAEAPADLAM----RQSREWQP 119

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           LL W             S     Q D  +  +   +   D + L AI A AAA  SL++A
Sbjct: 120 LLDWAAETLAAPLASTVSVLAVSQPDHALAALATHLDAQDSWRLTAIQAAAAATGSLILA 179

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           + +   ++  E A  L +L+E  Q+++WG
Sbjct: 180 LALAEERIDAEAAWSLSQLDETYQIEQWG 208


>gi|195999772|ref|XP_002109754.1| hypothetical protein TRIADDRAFT_21486 [Trichoplax adhaerens]
 gi|190587878|gb|EDV27920.1| hypothetical protein TRIADDRAFT_21486, partial [Trichoplax
           adhaerens]
          Length = 240

 Score =  111 bits (277), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 121/239 (50%), Gaps = 10/239 (4%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+ V T E   G G+ + LD + LKT + + L +P   LA A+  EW  Q    I P
Sbjct: 4   KRFYKNV-TIETIQG-GFLIKLDSKPLKTRNGQQLIVPNELLAVAVATEWAVQ-GKKIAP 60

Query: 154 FMMPLMKLACTALERVPLTRPKIIE--HLMKKFNQDLVFCRAPADNDLTSGVHERQVQKI 211
             MPL  +   AL+R P      +E   +M+    D +  RA   NDL +     Q    
Sbjct: 61  HNMPLTVMCNGALDR-PRNDNLRVETAQIMEYLATDTICIRATEPNDLVA----VQNHYW 115

Query: 212 DPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLV 271
           +PLL W+   F  +    +SF G      +   +++ + + D + L  +  +  +  SLV
Sbjct: 116 NPLLDWMNDRFQVRLSCSTSFTGADHSPAVKNAIQDEVSRLDAWSLTGLTVLVESLKSLV 175

Query: 272 IAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGLSR 330
           IA+ +    + I+EA++L RLE + Q  KWG VE  HD+++++L+ + ++A +F   S+
Sbjct: 176 IALAVTNRHITIDEAVDLARLEVNYQTAKWGNVEWAHDLEVSELKSKTAAAAIFYQCSQ 234


>gi|398353274|ref|YP_006398738.1| chaperone protein [Sinorhizobium fredii USDA 257]
 gi|390128600|gb|AFL51981.1| putative chaperone protein [Sinorhizobium fredii USDA 257]
          Length = 261

 Score =  111 bits (277), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 68/215 (31%), Positives = 112/215 (52%), Gaps = 7/215 (3%)

Query: 92  VGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGI 151
           + KRFY+ V   +A+ G+G+ V+LD R+++TP++R   +PTL LA+ + AEWD  Q D I
Sbjct: 29  LAKRFYKGVGVAQAE-GDGYAVLLDGRSVRTPARRSFTVPTLKLAELLAAEWD-AQADII 86

Query: 152 RPFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKI 211
            P  MPL ++  TA++ V L +  + + ++K    DL+  RA    D  +G+ ERQ    
Sbjct: 87  DPSAMPLTRIVNTAIDGVALDQRAVFDDILKFAGTDLLCYRA----DSPAGLVERQNAIW 142

Query: 212 DPLLKWVESEFGFKPVVYSSFFGGKQ-EDGLIKTVENLMKKTDDYELAAIDAIAAAAHSL 270
           +P+L W     G + ++       +Q  + +    E L        LA +  I     S 
Sbjct: 143 NPILDWAAQSLGARFILVEGVIHQEQPREAISAYAEGLRAFATPLGLACLHTITTLTGSA 202

Query: 271 VIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVE 305
           ++A+    G+L  EEA     ++ED Q++ WG  E
Sbjct: 203 LLALAFAMGRLSTEEAWAAAHVDEDWQIEHWGTDE 237


>gi|148223427|ref|NP_001090060.1| ATP synthase mitochondrial F1 complex assembly factor 2 [Xenopus
           laevis]
 gi|66910879|gb|AAH97914.1| MGC115713 protein [Xenopus laevis]
          Length = 284

 Score =  110 bits (276), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 122/246 (49%), Gaps = 12/246 (4%)

Query: 86  FMTGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDY 145
           F   ++  K+FYE VS    +   G+ + LD R LKTP  +   +P+  LA A+  EWD 
Sbjct: 34  FYAVAVERKKFYENVSISHGE--GGFEINLDRRKLKTPQGKLFAVPSEALALAVATEWDC 91

Query: 146 QQTDGIRPFMMPLMKLACTALERVPLTRPKIIEHLMK---KFNQDLVFCRAPADNDLTSG 202
           Q+ D I+ + M L  L  TAL+  P  R K  E L+K   KF +    C    D     G
Sbjct: 92  QR-DVIKFYTMQLTTLCNTALDN-PTLRNK--EQLIKPALKFLETDTICYRVED---PPG 144

Query: 203 VHERQVQKIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDA 262
           + E Q  + DP+++W E  +       +S  G              +   + + L  I+ 
Sbjct: 145 LVELQKNEWDPVIEWAEKRYNVVIGSSTSIHGPIIPTETKDVFSRHLASYNSWGLLGIEF 204

Query: 263 IAAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSA 322
           I +   SL++ +G+    L +E+A+ L RLEE+ Q+ +WG VE  HD D+ +LR + ++ 
Sbjct: 205 IISQLKSLILTMGLIDRHLPVEKAVLLSRLEEEYQIQRWGNVEWAHDYDLQELRSRTAAG 264

Query: 323 TVFLGL 328
           T+F+ L
Sbjct: 265 TLFVHL 270


>gi|374292580|ref|YP_005039615.1| hypothetical protein AZOLI_2171 [Azospirillum lipoferum 4B]
 gi|357424519|emb|CBS87398.1| conserved protein of unknown function [Azospirillum lipoferum 4B]
          Length = 231

 Score =  110 bits (276), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 70/241 (29%), Positives = 121/241 (50%), Gaps = 16/241 (6%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+     E +   G+ V LD R +++P+K PL  P+  LA+ +  EW   Q D I  
Sbjct: 2   KRFYKAAGVGETE--GGFRVELDGRPVRSPAKAPLVFPSRPLAQGVADEW-AAQGDQIDA 58

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MPLM+L+ TA++ +P  R  I++ +      DL+  RA     L     +RQ Q   P
Sbjct: 59  HSMPLMQLSSTAVDLIPAKRSDIVQAISAYAGTDLLCYRAEHPQPLV----DRQAQLWQP 114

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           LL W    +     V +      Q +  +  +  ++++TDD+ L+A+        S+++A
Sbjct: 115 LLDWAALTYDAPLHVCAGLMPKPQPEEALAALRRVVERTDDWYLSALQTTTGVCGSIIVA 174

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDI----ADLRVQISSATVFLGLS 329
           + +  G++  EEA E+ +L+E  Q+++W     G D +     A++R +I +   F+ L 
Sbjct: 175 LALLEGRIGAEEAFEVSQLDETYQIEQW-----GEDAEATKRRANVRAEIVACRRFVDLL 229

Query: 330 R 330
           R
Sbjct: 230 R 230


>gi|355670858|gb|AER94817.1| ATP synthase mitochondrial F1 complex assembly factor 2 [Mustela
           putorius furo]
          Length = 243

 Score =  110 bits (275), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 122/237 (51%), Gaps = 10/237 (4%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+ VS  + +   G+ + LD+R LKTP  +   +P+  LA A+  EWD QQ D I+ 
Sbjct: 2   KRFYQNVSITQGE--GGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWDSQQ-DTIKF 58

Query: 154 FMMPLMKLACTALERVPLTRPK--IIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKI 211
           + M L  L  T+L+  P  R K  +I   +K  + D +  R      L     E Q  + 
Sbjct: 59  YTMHLTTLCNTSLDN-PTQRNKDQLIRAAVKFLDTDTLCYRVEEPATLV----ELQKNEW 113

Query: 212 DPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLV 271
           DP+++W E  +  +    ++  G        + + + +   + + L  I+ +     SLV
Sbjct: 114 DPIIEWAEKRYDVEINSSTNIMGPSIPARTREVLVSHLASYNMWALQGIEFVVTQLKSLV 173

Query: 272 IAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGL 328
           + + +   +L +E+A+ L RLEE+ Q+ KWG +E  HD ++ +LR + ++ T+F+ L
Sbjct: 174 LTLALMDLRLTVEQAVLLSRLEEEYQIQKWGNIEWAHDYELQELRARTAAGTLFVHL 230


>gi|163796884|ref|ZP_02190841.1| chaperone [alpha proteobacterium BAL199]
 gi|159177873|gb|EDP62422.1| chaperone [alpha proteobacterium BAL199]
          Length = 236

 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 67/209 (32%), Positives = 105/209 (50%), Gaps = 5/209 (2%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KR Y+ V+   AD G G+TV+LD R + +P +RP+ LP   LA AI AEWD  Q + I  
Sbjct: 4   KRIYKTVAVATADAGAGFTVLLDSRPVGSPGQRPIILPGRVLADAIAAEWD-GQGETIDV 62

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
           + MP+M  A T ++RV   R  ++  +      DL+   A     LT+    RQ     P
Sbjct: 63  YSMPMMGFAATVIDRVAPQRDYVVGEVAGYGGSDLLCYLADDPPVLTA----RQETAWSP 118

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           L  W E+ FG + +         Q    +  +   ++  +D+ELAA+  + A   SLV+ 
Sbjct: 119 LRGWAEATFGARLLPTVGVMPVAQSPDSLAALRRTVEAVNDWELAALHTLTAITGSLVLG 178

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           + +   +L  E A  +  ++E  QV++WG
Sbjct: 179 LAVLHDRLDAEAAYTVSEIDEAYQVERWG 207


>gi|149913098|ref|ZP_01901632.1| hypothetical protein RAZWK3B_03880 [Roseobacter sp. AzwK-3b]
 gi|149813504|gb|EDM73330.1| hypothetical protein RAZWK3B_03880 [Roseobacter sp. AzwK-3b]
          Length = 243

 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 68/213 (31%), Positives = 107/213 (50%), Gaps = 7/213 (3%)

Query: 93  GKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIR 152
            KRF++       DDG  + V LD R +KTP+K PL +PT  +A+AI AEWD Q+ D I 
Sbjct: 6   AKRFWKTAEVDARDDG--FAVRLDGRPVKTPAKAPLVVPTQDMARAIAAEWDAQE-DVIN 62

Query: 153 PFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKID 212
           P  MP+ + A  A+++V     ++ + L    + DL+  RA +  +L      RQ +  D
Sbjct: 63  PHSMPVTRAANAAIDKVRHQHSEVAQMLADYGDADLLCYRAASPVELI----RRQSEAWD 118

Query: 213 PLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVI 272
           PLL W E+ FG +    +      Q++  +  +   + K D + L A   + + + SLVI
Sbjct: 119 PLLDWAEATFGVRLRTVTGVMHAPQDEAALAALTGPVHKMDAFTLTAFHDLVSLSGSLVI 178

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVE 305
                 G    E   +L R++E  Q + WG+ E
Sbjct: 179 GFAALTGHRPPEALWQLSRVDEQWQAELWGVDE 211


>gi|402225421|gb|EJU05482.1| ATP12-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
          Length = 267

 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 116/237 (48%), Gaps = 10/237 (4%)

Query: 94  KRFYEKVSTREA-DDGNGWTVMLDYRTLKTPSKRPLKLPTLG--LAKAIGAEWDYQQTDG 150
           KRF++ V    +  D     + LD R LKTP  +PL +P     LA  I  EWD Q+ + 
Sbjct: 32  KRFWKSVDVSPSKQDPETLAITLDKRPLKTPLGKPLAVPNTKPLLAALIAHEWDSQE-NV 90

Query: 151 IRPFMMPLMKLACTALE--RVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQV 208
           I+P  +P+  LA  AL+   +     ++ + L+K F+ D +         L       Q 
Sbjct: 91  IKPHALPVTSLASRALDGMHIENVHAQVRDALLKYFDTDTICFHEHHHPSLV----RLQD 146

Query: 209 QKIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAH 268
               P++ W + +FG +  +++   G  Q     K + + + K D ++LAA++    A  
Sbjct: 147 AHWKPIIDWAQEKFGVEIRIFTDLMGNVQPPETRKALGDWIAKYDAWQLAALERAVYATK 206

Query: 269 SLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVF 325
           S +IA+ +  G++  EEA +   +E + Q+++WG VE  HD+D  D+R Q+ S    
Sbjct: 207 SFLIALALVEGRITAEEAAQAAHVEVNSQIERWGEVEDSHDVDYHDIRRQLGSVACL 263


>gi|378825698|ref|YP_005188430.1| ATP synthase mitochondrial F1 complex assembly factor 2 ATP12
           [Sinorhizobium fredii HH103]
 gi|365178750|emb|CCE95605.1| ATP synthase mitochondrial F1 complex assembly factor 2 ATP12
           homolog; Flags: Precursor [Sinorhizobium fredii HH103]
          Length = 289

 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 111/215 (51%), Gaps = 7/215 (3%)

Query: 92  VGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGI 151
           + KRFY+ V   +A+ G G  ++LD R+++TP++RPL +PT+ LA+ + AEWD  Q D I
Sbjct: 57  LAKRFYKTVGVAQAE-GGGHAILLDGRSVRTPARRPLAVPTVKLAELLAAEWD-AQADII 114

Query: 152 RPFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKI 211
            P  MPL ++  TA++ V L +  + + +++    DL+  RA    D  +G+ ERQ    
Sbjct: 115 DPSAMPLTRIVNTAIDGVALDQRAVFDDILRFAGSDLLCYRA----DSPAGLVERQNAIW 170

Query: 212 DPLLKWVESEFGFKPVVYSSFFGGKQ-EDGLIKTVENLMKKTDDYELAAIDAIAAAAHSL 270
           +P+L W     G + ++       +Q  + +    E L        LA +  I     S 
Sbjct: 171 NPVLDWAAQSLGARFILAEGVIHQEQPREAITAYAEGLRAFATPLGLACLHTITTLTGSA 230

Query: 271 VIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVE 305
           ++A+    G+L  E A     ++ED Q++ WG  E
Sbjct: 231 LLALAFGMGQLSAENAWSAAHVDEDWQIEHWGTDE 265


>gi|321479178|gb|EFX90134.1| hypothetical protein DAPPUDRAFT_39815 [Daphnia pulex]
          Length = 252

 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 127/250 (50%), Gaps = 14/250 (5%)

Query: 84  MSFMTGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEW 143
           M F+ GS   KRFY+KVST +++    + ++LD R LKTP+    ++ +  LA A+  EW
Sbjct: 1   MFFIPGSQTRKRFYKKVSTVQSN--KDFEIILDNRKLKTPAGSVFRVSSEPLALAVANEW 58

Query: 144 DYQQTDGIRPFMMPLMKLACTALER-VPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSG 202
           D Q+ + I    M L  L  T L+    L +  I+ H++   + D + CR   ++D +S 
Sbjct: 59  DAQE-EKILVSSMHLTSLVNTILDNPNKLRKQDIVCHILTYLDNDTLLCREEGNSDWSS- 116

Query: 203 VHERQVQKIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDA 262
               Q ++ DPL+ W    +G      S+  G       I+  + L K    Y+   ++ 
Sbjct: 117 ---EQTKEWDPLVDWFNQRYGTNVESSSAITGPCLP---IEARDVLQKHLHSYDFWTLNG 170

Query: 263 IAAAAHS---LVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQI 319
           +  A  S   L++A+      L +EE++ L  LE + Q  +WG VE  HD+D  +++ + 
Sbjct: 171 LMFAVESVKSLILALACVDRHLTVEESVRLATLETNFQTRQWGRVEWAHDVDNFNVQSRF 230

Query: 320 SSATVFLGLS 329
           +++ +F+ L+
Sbjct: 231 AASILFVHLT 240


>gi|227821786|ref|YP_002825756.1| chaperone protein [Sinorhizobium fredii NGR234]
 gi|227340785|gb|ACP25003.1| putative chaperone protein [Sinorhizobium fredii NGR234]
          Length = 260

 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 69/215 (32%), Positives = 110/215 (51%), Gaps = 7/215 (3%)

Query: 92  VGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGI 151
           + KRFY+ V    A+ G G  V+LD R+++TP+KRPL +PT  LA+ + AEWD  Q + I
Sbjct: 28  LAKRFYKTVGVAPAE-GGGHAVLLDGRSVRTPAKRPLAVPTRKLAELLAAEWD-AQAEII 85

Query: 152 RPFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKI 211
            P  MPL +L  TAL+ V L +  + + +++    DL+  RA    D  +G+ ERQ    
Sbjct: 86  DPSAMPLTRLVNTALDGVALDQRAVFDDILRFTGSDLLCYRA----DSPAGLVERQNAIW 141

Query: 212 DPLLKWVESEFGFKPVVYSSFFGGKQ-EDGLIKTVENLMKKTDDYELAAIDAIAAAAHSL 270
           +P++ W     G + ++       +Q  + +    E L        LA +  I     S 
Sbjct: 142 NPVIDWAAQSLGARFILVEGVIHQEQPREAISAYAEGLRAFATPLGLACLHTITTLTGSA 201

Query: 271 VIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVE 305
           ++A+    G+L  E+A     ++ED Q+D WG  E
Sbjct: 202 LLALAFGMGRLSAEDAWSAAHVDEDWQIDHWGTDE 236


>gi|429207723|ref|ZP_19198979.1| Chaperone [Rhodobacter sp. AKP1]
 gi|428189116|gb|EKX57672.1| Chaperone [Rhodobacter sp. AKP1]
          Length = 221

 Score =  108 bits (270), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 62/198 (31%), Positives = 106/198 (53%), Gaps = 5/198 (2%)

Query: 105 ADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRPFMMPLMKLACT 164
           A++  G+ V+LD R ++TP+KRPL LPT  LA+A+ +EW  Q+ + +RP  MP+ + A +
Sbjct: 2   AEEPGGFAVLLDGRGVRTPAKRPLILPTCALAEAVASEWRAQEGE-VRPQTMPVTRSANS 60

Query: 165 ALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDPLLKWVESEFGF 224
           AL++V     ++ E L      DL+  RA A   L +    RQ +  DP+L W    F  
Sbjct: 61  ALDKVAPQFDEVTEMLAAYGGTDLLCYRATAPEALVA----RQARAWDPVLAWAAERFEA 116

Query: 225 KPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGKLQIE 284
                +      Q +  +  +   ++    +++A    + A + SL++ +G+  G L  E
Sbjct: 117 PLETTAGVMHQAQPEASLTRLAEHVRSFSPFQVAGFHDLVAISGSLILGLGVTEGHLLPE 176

Query: 285 EAIELIRLEEDLQVDKWG 302
           EA EL R++E  Q+++WG
Sbjct: 177 EAWELSRVDESWQIEQWG 194


>gi|392567583|gb|EIW60758.1| ATP12-domain-containing protein [Trametes versicolor FP-101664 SS1]
          Length = 287

 Score =  108 bits (270), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 71/268 (26%), Positives = 132/268 (49%), Gaps = 23/268 (8%)

Query: 65  IKGRKQETASSSSSSVTMPMSFMTGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPS 124
           I   +Q T +++ + VT+           KRF++ V   +     G+ V LD R LKTP 
Sbjct: 36  ISTSEQATNATNRAEVTL-----------KRFWKSVGIDK--QQGGYAVTLDSRPLKTPG 82

Query: 125 KRPLKLPTLG--LAKAIGAEWDYQQTDGIRPFMMPLMKLACTALERV---PLTRPKIIEH 179
             P+ +P     +A  + +EW+ Q T  ++P  +P+  +   A++       TR ++   
Sbjct: 83  GNPMIIPPQKRLVAALVASEWENQDT-VLKPHALPMTSIVSRAIDAFRDDENTRNEVRAQ 141

Query: 180 LMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDPLLKWVESEFGFKPVVYSSFFGGKQED 239
           L+K F  D +F  A    D  + + + Q +  +P+L W +  FG   VV +S     Q  
Sbjct: 142 LLKYFETDTIFYHA----DEPAALVKLQEEHWNPILDWAKKTFGVDIVVSNSLVVPSQSP 197

Query: 240 GLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVD 299
             +K  E+++ +   +E+AA++    ++ S +I + +   +L +++A +   +E + Q++
Sbjct: 198 ETMKKFEDILAQFSPWEMAAMERATYSSKSFLIGLALVMRRLDVDQAAQAAHVEVNSQIE 257

Query: 300 KWGLVEGGHDIDIADLRVQISSATVFLG 327
            WG VE  HD+D  D+R Q+ SA   L 
Sbjct: 258 LWGEVEDTHDVDYHDMRRQLGSAACLLA 285


>gi|389749125|gb|EIM90302.1| ATP12-domain-containing protein [Stereum hirsutum FP-91666 SS1]
          Length = 285

 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 119/238 (50%), Gaps = 11/238 (4%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLG--LAKAIGAEWDYQQTDGI 151
           KRF++ V   +   G+  TV LD R LKTPS   L +P     +A  I +EW+ Q T  +
Sbjct: 53  KRFWKTVDVEK--KGDALTVTLDKRPLKTPSGNQLLVPPHKKLVATLIASEWENQLT-LL 109

Query: 152 RPFMMPLMKLACTALERVP--LTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQ 209
           +P  +P+  L   A++ +    +R ++ + L+K  + D +   A    D    V   Q +
Sbjct: 110 KPHALPMTSLTARAIDAMAEETSRAEVRDTLLKYLDTDTICFHA----DEPPPVVRLQNE 165

Query: 210 KIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHS 269
              P+L WV SEF  +   + S     Q     +    ++ + D +E+AA++ +A  A S
Sbjct: 166 HWMPILDWVRSEFDVEIKTFDSILFHPQPKETKEKFSKILSEFDQWEMAAMEHVAYTAKS 225

Query: 270 LVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLG 327
            +IA+ +   +L +E+A    R+E   Q+++WG VE  HD+D  D+R  I SA   L 
Sbjct: 226 FLIALAVVHKRLTVEQAALAARVEVSSQIERWGEVEDSHDVDHHDVRRHIGSAACLLA 283


>gi|403174914|ref|XP_003333814.2| hypothetical protein PGTG_15237 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|375171374|gb|EFP89395.2| hypothetical protein PGTG_15237 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 302

 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 146/301 (48%), Gaps = 16/301 (5%)

Query: 33  VATVHQSPQYDDDPTSSFTFSSPSDKINESIYIKGRKQETASSS---SSSVTMPMSFMTG 89
           + +V ++P +    T  F  S+ S   + ++    R Q TA+++   S   T+P      
Sbjct: 7   IHSVARAPHHQRPSTICFRTSTSS---SSALPCLTRSQSTATATKELSEPSTIPSQTTRA 63

Query: 90  SIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPT--LGLAKAIGAEWDYQQ 147
               +RF++ V   + +DG  +++ LD R LKTPS +PL LP   L LA  I  EWD +Q
Sbjct: 64  ETSLRRFWKTVDVHKQEDGQ-YSIRLDLRNLKTPSGKPLVLPKTKLVLATLIAREWD-EQ 121

Query: 148 TDGIRPFMMPLMKLACTALERVP-LTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHER 206
              ++   +P+  LA  A++ +    R  +++ LM+  + D +  +      L     E 
Sbjct: 122 RKILKQHSLPMTSLASRAIDGLSEAERDAVVDDLMRYLDTDTICFQESKPRVLA----EM 177

Query: 207 QVQKIDPLLKWVESEFGFKPVVYS-SFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAA 265
           Q     PLL W++  +G    V+  S    KQ       +  L+ + D  +LAA +    
Sbjct: 178 QKTHWAPLLVWLQEAYGIHLRVHEDSIVYSKQSPETHSKLRALVAQFDPLKLAAFERAVH 237

Query: 266 AAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVF 325
           A  S VIA+ + +  L +++A +  R+E   Q+ +WG VE  HD+D  ++R+++ S +  
Sbjct: 238 ATKSFVIALALVQNHLTVDQASDASRVEVLSQIARWGEVEDTHDVDYQEIRMKLGSVSCA 297

Query: 326 L 326
           +
Sbjct: 298 I 298


>gi|336367107|gb|EGN95452.1| hypothetical protein SERLA73DRAFT_186464 [Serpula lacrymans var.
           lacrymans S7.3]
 gi|336379828|gb|EGO20982.1| hypothetical protein SERLADRAFT_475515 [Serpula lacrymans var.
           lacrymans S7.9]
          Length = 289

 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 83/286 (29%), Positives = 138/286 (48%), Gaps = 14/286 (4%)

Query: 47  TSSFTFSSPSDKINESIYIKG-RKQETASSSSSSVTMPMSFMTGSIVGKRFYEKVSTREA 105
           T S   S+   +++ S  +   RK  TA+S    V    +    ++  KRF++ V   + 
Sbjct: 10  TRSLAVSAARSELHSSRLVWCTRKYVTAASHDGPVVSETNRAEATL--KRFWKHVGLEKR 67

Query: 106 DDGNGWTVMLDYRTLKTPSKRPLKLPTLG--LAKAIGAEWDYQQTDGIRPFMMPLMKLAC 163
           D  N + V LD R +KTPS   L LP     LA  I  EW+ Q+   ++P  +P+  LA 
Sbjct: 68  D--NSFAVTLDKRAIKTPSGNTLLLPENKRLLATLIADEWENQER-LLQPHALPMTSLAS 124

Query: 164 TALERV--PLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDPLLKWVESE 221
            A++ +    TR ++   L+   + D +   A    D    V E Q +   PLL WV S 
Sbjct: 125 RAIDAMGDDKTRSEVRAALLTYLDTDTICFHA----DDPPPVVELQEKYWLPLLDWVRST 180

Query: 222 FGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGKL 281
           F  +  V+ S     Q D   +  ++++   + +ELAA++ +   + S +IA+ + +  L
Sbjct: 181 FEVEIKVFDSVLFHSQSDETKRKFDDVLANLNPWELAAMERVTYTSKSFLIALALVKKHL 240

Query: 282 QIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLG 327
            +EEA    ++E   Q+ +WG VE  HD+D  D+R Q+ SA   + 
Sbjct: 241 TVEEAALAAQVEVASQIQRWGEVEDSHDVDFHDIRRQLGSAACLMA 286


>gi|409046448|gb|EKM55928.1| hypothetical protein PHACADRAFT_209438 [Phanerochaete carnosa
           HHB-10118-sp]
          Length = 296

 Score =  108 bits (269), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 86/288 (29%), Positives = 138/288 (47%), Gaps = 30/288 (10%)

Query: 62  SIYIKG-RKQETASSSSSSVTMPMSFMTGSIVGKRFYEKV-------------STREADD 107
           +I ++G R Q T ++S  +VT   +        KRF++ V             ST  A D
Sbjct: 13  NIILRGARTQATIATSGPAVT---ATNRAQATLKRFWKDVGIEVQPGLSAASTSTTPASD 69

Query: 108 G--NGWTVMLDYRTLKTPSKRPLKLPTL-GLA-KAIGAEWDYQQTDGIRPFMMPLMKLAC 163
              N  TV LD R LKTPS   L LP    LA   I AEWD Q+T  ++   +P+  LA 
Sbjct: 70  ASKNHLTVTLDKRPLKTPSGDQLLLPKHKALAVTLIAAEWDNQET-LLKQHSLPMTSLAS 128

Query: 164 TALERV----PLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDPLLKWVE 219
            A++        TR ++ + L+K F  D +   A     L S     Q +  +PLL W  
Sbjct: 129 RAIDAFRNSKADTRVQVYDQLLKYFETDAICFHASEPASLVS----LQKRHWEPLLTWAR 184

Query: 220 SEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRG 279
             F  +  V + F   +Q    +     ++++ D++E+AA++       S +IA+ + + 
Sbjct: 185 ESFTVEVNVTTGFSVPRQPAETLAAFRKVLEQMDEWEMAAMERATYTTKSFLIALALVKR 244

Query: 280 KLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLG 327
           ++  E+A +   +E + Q++KWG VE  HD+D  D+R Q+ SA+  L 
Sbjct: 245 RVTAEQAAQASHVEVNSQIEKWGEVEDSHDVDYHDVRRQLGSASCLLA 292


>gi|395330232|gb|EJF62616.1| ATP12-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
          Length = 287

 Score =  108 bits (269), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 80/265 (30%), Positives = 127/265 (47%), Gaps = 19/265 (7%)

Query: 74  SSSSSSVTMPMSFMTGSIVG------KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRP 127
           SSS +  T+P S    +         KRF++ V   E  DG G+ V LD R LKTPS + 
Sbjct: 29  SSSRTHATVPESGPAVTATNRAEATLKRFWKNVEI-EKRDG-GYAVTLDKRPLKTPSGKR 86

Query: 128 LKLPTLG--LAKAIGAEWDYQQTDGIRPFMMPLMKLACTAL---ERVPLTRPKIIEHLMK 182
           L +P     +A  I +EW+ Q+T  ++P  +P+  +A  AL   E  P TR ++   L+K
Sbjct: 87  LIIPPEKRLVAALIASEWENQET-LLKPHALPMTSIASRALDAFEDEP-TREEVRAQLLK 144

Query: 183 KFNQDLVFCRAPADNDLTSGVHERQVQKIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLI 242
            F  D +F  A     L     + Q     P+L W  S F  +     SF    Q    I
Sbjct: 145 YFETDTIFYHATEPATLV----KLQEAHWKPILHWARSTFDVEIATTDSFLVPSQPPETI 200

Query: 243 KTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
             +   + K   +E+AA++     + S +IA+ + +  + +++A +    E + Q+++WG
Sbjct: 201 LKLNEALIKFSPWEMAAMERATYTSKSFLIALALVKRHIDVDQAAQAAHAEVNSQIERWG 260

Query: 303 LVEGGHDIDIADLRVQISSATVFLG 327
            VE  HD+D  D+R Q+ SA   L 
Sbjct: 261 EVEDSHDVDYHDIRRQLGSAACLLA 285


>gi|209731280|gb|ACI66509.1| ATP synthase mitochondrial F1 complex assembly factor 2,
           mitochondrial precursor [Salmo salar]
          Length = 291

 Score =  107 bits (268), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 70/238 (29%), Positives = 114/238 (47%), Gaps = 9/238 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           K+FYE VS    + G  + + LD R LKTP  +    P   LA A+  EWD Q+ D ++ 
Sbjct: 48  KKFYEDVSISHGE-GGMFEINLDRRKLKTPGGKLFTAPNQALAIAVANEWDTQK-DMLKF 105

Query: 154 FMMPLMKLACTALERVPLTRPK--IIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKI 211
           + M +  L  TAL+  P  R K  +I   +K    D V  R      L     E Q  + 
Sbjct: 106 YSMHMNTLCNTALDN-PTFRSKDQMITAALKYLETDTVCYRVEEPPSLV----ELQNNEW 160

Query: 212 DPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLV 271
           DP+L W+E  +       +S  G +     + T    +   + + L  ++ +     S+V
Sbjct: 161 DPVLNWIEDRYNVVIGSSTSILGPEIPQATMDTFRQHLGSYNFWSLTGLEYVITQLKSVV 220

Query: 272 IAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGLS 329
           +A  +    + +E+A+ L RLEE+ Q+  WG VE  HD+D+ +LR + ++  +F+  S
Sbjct: 221 LAFALIDKHITVEQAVLLSRLEEEFQIGHWGNVEWAHDVDLYELRSRTAAGALFVHFS 278


>gi|424887738|ref|ZP_18311341.1| chaperone required for the assembly of F1-ATPase [Rhizobium
           leguminosarum bv. trifolii WSM2012]
 gi|393173287|gb|EJC73331.1| chaperone required for the assembly of F1-ATPase [Rhizobium
           leguminosarum bv. trifolii WSM2012]
          Length = 261

 Score =  107 bits (268), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 67/210 (31%), Positives = 109/210 (51%), Gaps = 8/210 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY  VS  E +DG  + V LD +T++TP+++ L +PT  LA+ + AEW   Q + I P
Sbjct: 31  KRFYTDVSVAEHEDG--FAVTLDGKTVRTPARQVLAVPTEALARLVAAEW-RAQGEEIDP 87

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP+ +L  TAL+ V   R  I E +++  + DL+  RA     L +    RQV++ DP
Sbjct: 88  LTMPVTRLVNTALDGVDANRQAIFEDILRFSSSDLICYRADGPELLVA----RQVERWDP 143

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDD-YELAAIDAIAAAAHSLVI 272
           ++ W   + G + ++       +Q           + + D    LAA+  I     S ++
Sbjct: 144 VIDWAAHDLGARFILIEGVMPQEQPREATAAFAVTLARFDSPMALAALHTITTLTGSAIL 203

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           A+ I  G++ +EEA  L  L+ED  ++ WG
Sbjct: 204 ALAIACGRVTMEEAWSLAHLDEDWTIEHWG 233


>gi|254438539|ref|ZP_05052033.1| ATP12 chaperone protein [Octadecabacter antarcticus 307]
 gi|198253985|gb|EDY78299.1| ATP12 chaperone protein [Octadecabacter antarcticus 307]
          Length = 240

 Score =  107 bits (267), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 69/211 (32%), Positives = 107/211 (50%), Gaps = 7/211 (3%)

Query: 92  VGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGI 151
           V KRF+  V+  E D   G+ V LD R +KTP+K  L LPT  +A A+  EW     + I
Sbjct: 5   VAKRFWTDVTVIETD--GGFAVQLDSRLVKTPAKAALVLPTRAMADAVAGEWRLV-VEKI 61

Query: 152 RPFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKI 211
            P +MP+ + A  A+++V +   ++   L      DL+  RA    +   G+ +RQ    
Sbjct: 62  DPNVMPVTRSANAAIDKVAIQFSEVAAMLAAYGGSDLLCYRA----ENPEGLVQRQSDGW 117

Query: 212 DPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLV 271
           DPLL W    FG + +  +      Q    +  +   +     +ELAA   + A + SLV
Sbjct: 118 DPLLDWAHDTFGARLIQTAGIMPIDQNKTDLNVLTAPIFAATPFELAAFHDLIAMSGSLV 177

Query: 272 IAIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           IA+G+ RG+L  +EA  L R++E  Q ++WG
Sbjct: 178 IALGVTRGRLAPKEAWALSRIDETWQAERWG 208


>gi|302690960|ref|XP_003035159.1| hypothetical protein SCHCODRAFT_65870 [Schizophyllum commune H4-8]
 gi|300108855|gb|EFJ00257.1| hypothetical protein SCHCODRAFT_65870 [Schizophyllum commune H4-8]
          Length = 283

 Score =  107 bits (267), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 110/237 (46%), Gaps = 11/237 (4%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLP--TLGLAKAIGAEWDYQQTDGI 151
           KRF++ V   E D   G+ V LD R LKTPS   L LP     +A  I AEW+ Q T  +
Sbjct: 51  KRFWKDVDVAERD--GGYVVTLDRRALKTPSGNTLLLPRNKFAVASLIAAEWESQST-VL 107

Query: 152 RPFMMPLMKLACTALERV--PLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQ 209
           +P  +P+  LA  A++       R ++ + L+   + D +       + L +     Q Q
Sbjct: 108 KPHALPITSLASRAIDAFTNATERAQVQKGLLDYLHTDTICFHQDEPHQLVT----LQKQ 163

Query: 210 KIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHS 269
             DPLL W    +G       S F   Q       +   + + D +ELA+ +       S
Sbjct: 164 HWDPLLDWARKTYGVDVRKAESLFSSTQPPETADKLAKALDELDQWELASFERATHVTKS 223

Query: 270 LVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFL 326
            +IA+ + +  L +E+A     +E + Q+ +WG VE  HD+D  D+R Q+ SA   L
Sbjct: 224 FLIALALVKRCLNVEQAANAAHVEVNSQIQRWGEVEDTHDVDYHDVRRQLGSAACLL 280


>gi|393220475|gb|EJD05961.1| ATP12-domain-containing protein [Fomitiporia mediterranea MF3/22]
          Length = 280

 Score =  107 bits (267), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 75/267 (28%), Positives = 124/267 (46%), Gaps = 9/267 (3%)

Query: 62  SIYIKGRKQETASSSSSSVTMPMSFMTGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLK 121
           S+Y+  R+ + + ++++  T   +        KRF++ V      DG    V LD R LK
Sbjct: 20  SLYLASRQVQRSLATTADGTPVTATNRAEATLKRFWKTVGIDTRSDGIA--VTLDRRALK 77

Query: 122 TPSKRPLKLP-TLGLAKA-IGAEWDYQQTDGIRPFMMPLMKLACTALERVPLTRPKIIEH 179
           TPS   L LP    LA A I  EW+  Q   ++P  +P+         R   TR ++   
Sbjct: 78  TPSGNILILPHEKRLAAALIANEWE-NQDKVLKPHALPMATSRAIDAFRERQTREEVTAA 136

Query: 180 LMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDPLLKWVESEFGFKPVVYSSFFGGKQED 239
           L+K    D +        D    +   Q     PLL W+  E+     V+ S  G  Q  
Sbjct: 137 LLKYLETDTICFH----EDSPEALVRLQDAHWQPLLSWIRDEYNVDVGVHKSVLGTDQPP 192

Query: 240 GLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVD 299
             I  +  ++K  D+++LAA++       S +IA+ + RG+L +E+A +   +E + Q++
Sbjct: 193 ETIARLGEILKAFDEWQLAAMERATYTTKSFIIALALIRGQLDVEQAAQAGHVEVNSQIE 252

Query: 300 KWGLVEGGHDIDIADLRVQISSATVFL 326
           KWG VE  HD+D  D+R Q+ +    +
Sbjct: 253 KWGEVEDSHDVDYQDIRRQLGTVACLV 279


>gi|126736637|ref|ZP_01752377.1| ATP12 ATPase [Roseobacter sp. CCS2]
 gi|126713950|gb|EBA10821.1| ATP12 ATPase [Roseobacter sp. CCS2]
          Length = 236

 Score =  107 bits (266), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 112/209 (53%), Gaps = 7/209 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRF+++      +   G+TV LD R ++TP+K  L +PTL +A AI  EWD Q+ + I P
Sbjct: 7   KRFWKQAQAEVCE--GGFTVKLDGRLVRTPAKAALTVPTLAMADAIATEWDAQE-ELIDP 63

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP+ + A  A+++V   R ++I  L +  + DL+  RA        G+ +RQ +  DP
Sbjct: 64  RTMPVTRGANAAIDKVRTQRSEVIALLAEYGDSDLLCYRAAG----PEGLIQRQAEGWDP 119

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           +L W     G +  V        Q+  ++  +   +   DD+ LA +  + + + SL++A
Sbjct: 120 MLDWAADTLGARLFVGEGVMHVTQKPDVLSKLTTEVATFDDFALAGVHDLISLSGSLILA 179

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           + I +  + +E+A  L R++E  Q+++WG
Sbjct: 180 LAITKDAIAVEDAWLLSRIDEHWQIEQWG 208


>gi|224000205|ref|XP_002289775.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220974983|gb|EED93312.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 408

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 118/251 (47%), Gaps = 38/251 (15%)

Query: 109 NGW-TVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRPFMMPLMKLACTALE 167
           +GW TV LD R L+TP   PL LP+  LA A+ +EWD Q+   +RP  MPLM L CTA++
Sbjct: 140 SGWHTVTLDGRALRTPLGLPLTLPSAHLALAVASEWDAQE-KVLRPAQMPLMTLCCTAID 198

Query: 168 RVPLTRPKIIEHLMKKFNQDLV-FCRAPADNDLTSGVHERQVQKIDPLLKWVESEF---- 222
           +V        + +M+    D V +   P ++ L   +H RQ Q  + L K +  E     
Sbjct: 199 QVASDPSAHQQDVMRYLRNDTVCYWACPTEDRL---LHRRQTQAWEGLHKSLSMELLGLS 255

Query: 223 ----------GFKPVVYSSFFGGKQEDGL------IKTVENLMKKTDDYELAAIDAIAAA 266
                     G + +V S    G    GL      ++  +  +   D + LA++ +  A 
Sbjct: 256 DDLGPTQATGGGEALVLSRSSEGNPMSGLPHPPVLVEKAQQWVDSLDAWRLASLYSACAE 315

Query: 267 AHSLVIAIG-IFRGKLQIEE-----------AIELIRLEEDLQVDKWGLVEGGHDIDIAD 314
           + S  I    +F    ++E            A+   R+EE+L ++ WGLVEGGHD D  +
Sbjct: 316 SKSFFIGAALVFEAAQRVEGHESKVQTNAKWAVRAARVEEELNIETWGLVEGGHDYDRLN 375

Query: 315 LRVQISSATVF 325
             +Q+ SA+  
Sbjct: 376 CSIQMHSASFL 386


>gi|156375596|ref|XP_001630166.1| predicted protein [Nematostella vectensis]
 gi|156217181|gb|EDO38103.1| predicted protein [Nematostella vectensis]
          Length = 237

 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 118/239 (49%), Gaps = 8/239 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+     E +   G+ + +D R +KTP++  L +P   LA A+ +EW+  QT  I+P
Sbjct: 3   KRFYKSAGVEETE--GGFQITVDNRKVKTPARNWLVVPNQKLAVAMASEWN-MQTGTIKP 59

Query: 154 FMMPLMKLACTALER-VPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKID 212
             M L  LA T +++    ++ + IE +++    D V   A   +DL     E Q  +  
Sbjct: 60  ASMHLTSLANTVIDKPSECSKDQRIEDILEYLYTDTVRFPASDPDDLV----ELQKTEWG 115

Query: 213 PLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVI 272
           PL+ W  S FG              E G +  ++  +   + + +  ++     + S + 
Sbjct: 116 PLISWFSSRFGVSVPSCEGLLATPLEPGDVNKLKYELTSVNHWAMTGLEYAVDTSKSFIT 175

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGLSRR 331
           ++ +    + +E+A  L RLE + Q+ +WG VE  HD+D+ +LR ++++A +F  L  R
Sbjct: 176 SMALLDNHVTVEKAAYLTRLELEFQIGRWGSVEWAHDVDLMELRCRLAAAALFYHLCIR 234


>gi|45360725|ref|NP_989036.1| ATP synthase mitochondrial F1 complex assembly factor 2 precursor
           [Xenopus (Silurana) tropicalis]
 gi|38174102|gb|AAH61383.1| hypothetical protein MGC75949 [Xenopus (Silurana) tropicalis]
          Length = 277

 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 117/237 (49%), Gaps = 8/237 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           K+FYE VS    +   G+ + LD R L+TP  +    P+  LA A+  EWD Q+ D I+ 
Sbjct: 35  KKFYENVSISHGE--GGFEINLDRRKLRTPQGKIFTAPSEALAVAVATEWDCQR-DVIKF 91

Query: 154 FMMPLMKLACTALERVPL-TRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKID 212
           + M L  L  TAL+   L  + ++I   +K    D V  R     +   G+ E Q  + D
Sbjct: 92  YTMHLTTLCNTALDNPTLRNKEQLITAALKFLETDTVCYRV----EEPPGLVELQRNEWD 147

Query: 213 PLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVI 272
           P+++W E  +       +S  G              +   + + L  I+ I +   SLV+
Sbjct: 148 PVIEWAEKRYNVVIGSSTSIQGPIIPTETKDVFSRHLASYNSWGLLGIEFIISQLKSLVL 207

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGLS 329
            +G+    L +E+A+ L RLEE+ Q+ +WG VE  HD D+ +LR + ++ T+F+ L 
Sbjct: 208 TMGLIDRHLPVEKAVLLSRLEEEYQIQRWGNVEWAHDYDLQELRSRTAAGTLFVHLC 264


>gi|75675590|ref|YP_318011.1| chaperone required for the assembly of F1-ATPase [Nitrobacter
           winogradskyi Nb-255]
 gi|74420460|gb|ABA04659.1| Chaperone required for the assembly of F1-ATPase [Nitrobacter
           winogradskyi Nb-255]
          Length = 260

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 107/212 (50%), Gaps = 8/212 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY +V   E  +G  + ++LD R ++TPS+  L  P   +A+ I AEWD Q  D I P
Sbjct: 29  KRFYARVGVNETPEG--FAILLDDRPVRTPSRNVLAAPVREIAETIAAEWDAQH-DLINP 85

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MPL +LA + ++ V +    ++E + K    DL+F RA   + L +    R+  + DP
Sbjct: 86  MTMPLTRLANSIIDGVTVRVDAVVEDIAKYLETDLLFYRASHPDALVA----REATQWDP 141

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           +L+W     G + +        +Q D  +  V   +  TD + + A+  +     S ++A
Sbjct: 142 VLQWAAEALGARFIPAEGIVHVRQPDQAVTAVRKAL-PTDPWVVGALHVVTTLTGSALLA 200

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWGLVE 305
           I + RG+L  +E      ++ED   ++WG+ E
Sbjct: 201 IALMRGRLDADEVWAAACVDEDWNSEQWGVDE 232


>gi|163849733|ref|YP_001637776.1| ATP12 ATPase [Methylobacterium extorquens PA1]
 gi|163661338|gb|ABY28705.1| ATP12 ATPase [Methylobacterium extorquens PA1]
          Length = 267

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/216 (31%), Positives = 105/216 (48%), Gaps = 8/216 (3%)

Query: 88  TGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQ 147
           TG  + KRFY +    EA+   G+ ++LD R   TP +RPL +P   L +A+ AEW+  Q
Sbjct: 32  TGPTLPKRFYAQAGLAEAE--GGFRLVLDGRGANTPGRRPLVVPDRVLGEALAAEWE-AQ 88

Query: 148 TDGIRPFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQ 207
            D I P  MPL +L  T ++ V   R  + E L      DLV  RA A   L +     Q
Sbjct: 89  ADVIDPRTMPLTRLVNTTIDGVVERRAAVAEDLAAFAGTDLVAYRAGAPERLVA----VQ 144

Query: 208 VQKIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDD-YELAAIDAIAAA 266
            +  DPL+ WV    G +  +       +Q +G +  +   ++  DD + LAA+  +   
Sbjct: 145 SEAWDPLVAWVAETLGARLFLAEGVMHVEQPEGSVAALRAAIEAVDDPFRLAALHTLTTL 204

Query: 267 AHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
             SLVIA+ +  G+L  ++A     ++E  Q   WG
Sbjct: 205 TGSLVIALAVLHGRLSADDAWAAAHVDETYQASVWG 240


>gi|188579625|ref|YP_001923070.1| ATP12 ATPase [Methylobacterium populi BJ001]
 gi|179343123|gb|ACB78535.1| ATP12 ATPase [Methylobacterium populi BJ001]
          Length = 267

 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/231 (31%), Positives = 109/231 (47%), Gaps = 18/231 (7%)

Query: 73  ASSSSSSVTMPMSFMTGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPT 132
           A+ +S++ T+P          KRFY K    EA+   G+ ++LD R   TP +RPL +P 
Sbjct: 27  AARASTAPTLP----------KRFYAKAGLAEAE--GGYRLVLDGRGANTPGRRPLVVPD 74

Query: 133 LGLAKAIGAEWDYQQTDGIRPFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCR 192
           +GL +A+ AEW  Q+T  I P  MPL +L  T ++ V   R  + E L      DLV  R
Sbjct: 75  IGLGEALAAEWAAQETV-IDPRTMPLTRLVNTTIDGVVERRAAVAEDLGAFAGTDLVAYR 133

Query: 193 APADNDLTSGVHERQVQKIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKK- 251
           A     L +     Q    DPL+ W    FG +  +       +Q +G +  +   +   
Sbjct: 134 AGTPERLVA----EQAAAWDPLVAWAAETFGARLFLAEGVMHVEQPEGSVAALRAAIDAV 189

Query: 252 TDDYELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
            D + LAA+ A+     SLVIA+ +   +L  +EA     ++E  Q   WG
Sbjct: 190 ADPFRLAALHALTTLTGSLVIALAVLHRRLGADEAWAAAHVDETYQASVWG 240


>gi|424870799|ref|ZP_18294461.1| chaperone required for the assembly of F1-ATPase [Rhizobium
           leguminosarum bv. viciae WSM1455]
 gi|393166500|gb|EJC66547.1| chaperone required for the assembly of F1-ATPase [Rhizobium
           leguminosarum bv. viciae WSM1455]
          Length = 261

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 116/237 (48%), Gaps = 8/237 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY +VS   A+   G+ + LD + ++TP+++ L +PT  LA+ + AEW  Q  + I P
Sbjct: 31  KRFYTEVSV--AEHEGGFAITLDGKMVRTPARQVLAVPTEALARLVAAEWQAQGEE-INP 87

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP+ +L  TAL+ V      I E +++  + DL+  RA     L     ERQ ++ DP
Sbjct: 88  MSMPVTRLVNTALDGVTANAQAIFEDILRFSSSDLICYRAEEPERLV----ERQAERWDP 143

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDD-YELAAIDAIAAAAHSLVI 272
           ++ W  ++ G + ++       +Q    I      + + D    LA +  +     S ++
Sbjct: 144 VIDWAANDLGARFILVEGVMHHEQPREAIAAFAVTLARHDSPIALATLHTVTTLTGSAIL 203

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGLS 329
           A+    G++ +EEA  L  L+ED  +++WG  E   +          ++A VF  LS
Sbjct: 204 ALAFAEGRVTVEEAWSLAHLDEDWTIERWGRDEEAEERRAKRFAEFKAAADVFFALS 260


>gi|114570309|ref|YP_756989.1| ATP12 ATPase [Maricaulis maris MCS10]
 gi|114340771|gb|ABI66051.1| ATP12 ATPase [Maricaulis maris MCS10]
          Length = 255

 Score =  105 bits (262), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 71/238 (29%), Positives = 115/238 (48%), Gaps = 12/238 (5%)

Query: 90  SIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTD 149
           S + KRFY+ V     D+   + V LD R +K+P+KR L LPT  LA+ + +EW+  Q +
Sbjct: 18  SSLPKRFYKAVDVVALDES--FAVHLDGRPVKSPAKRTLALPTRALAELVASEWE-AQGE 74

Query: 150 GIRPFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQ 209
            I    MP  +L   AL+ +P  R   +  + K  + DLV  RAP   +LT+     Q  
Sbjct: 75  RINAPTMPATRLCFVALDLIPDARSATVAEVTKYASTDLVCFRAPEPPELTAS----QAA 130

Query: 210 KIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHS 269
             DP+L W E   G   V  +      Q+   ++ V     + DD+ L  +  + A   S
Sbjct: 131 AWDPVLAWAEDSLGAHFVAATGLMPIHQDPVALQRVMQRAGELDDWRLTTLAHVTAVCGS 190

Query: 270 LVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLG 327
            ++A+ +  G++  E+A  L  L+E  Q+ +W     G D + AD   ++ +  V +G
Sbjct: 191 ALLALQLLDGEIDGEQAFALSTLDEHFQISQW-----GEDHEAADRLARLRTELVTMG 243


>gi|163745574|ref|ZP_02152934.1| ATP12 chaperone protein, putative [Oceanibulbus indolifex HEL-45]
 gi|161382392|gb|EDQ06801.1| ATP12 chaperone protein, putative [Oceanibulbus indolifex HEL-45]
          Length = 237

 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 66/210 (31%), Positives = 104/210 (49%), Gaps = 7/210 (3%)

Query: 93  GKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIR 152
            KRF++     E D   G+TV LD R +KTP+KRPL LPT  +A+A+ AEW  Q+   I 
Sbjct: 6   AKRFWKDADVVEVD--GGFTVELDGRRVKTPAKRPLTLPTRAMAEAVAAEWQAQEKQ-ID 62

Query: 153 PFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKID 212
           P  MP+ K A  A+++V + + +++  L    + DL+  RA    +L +    RQ  + D
Sbjct: 63  PRTMPVTKTANAAIDKVAVQQDEVVAMLAAYGDSDLLCYRADNPEELMA----RQAAEWD 118

Query: 213 PLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVI 272
           P+L W  +  G K           Q    +  +     + D +ELAA   + +   SLV+
Sbjct: 119 PMLNWAAAFLGVKLETRQGIMHRPQSPEALAKMHRRTAELDAFELAAFHDLVSLTGSLVL 178

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
            +         +E   L RL+E+ Q ++WG
Sbjct: 179 GLAAAEQAFDPQEIWALSRLDENWQAEQWG 208


>gi|340028920|ref|ZP_08664983.1| ATP12 ATPase [Paracoccus sp. TRP]
          Length = 236

 Score =  105 bits (261), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 106/210 (50%), Gaps = 7/210 (3%)

Query: 93  GKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIR 152
            +RF++ V+ R+  +  GWTV+LD R L+TP K+PL LP   LA+AI  EW   + D I 
Sbjct: 6   ARRFWKSVNLRK--EAGGWTVLLDERPLRTPGKQPLILPAGALAEAIAEEWQTVE-DVIN 62

Query: 153 PFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKID 212
           P  MPL + A +A+E+V     ++   L +    DL+  RA A   L       Q +  D
Sbjct: 63  PQDMPLTRAANSAIEKVIPQFAQVAAMLAEYGGTDLLSYRADAPETLVRA----QAEGWD 118

Query: 213 PLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVI 272
           PL+ W  +E      +        QE  ++  +   + + D + L A+  +     SL++
Sbjct: 119 PLIDWAATELKAPLRITHGVIPVPQEPAVLGKLHAEVAELDPFGLTALHDLVTLPGSLIL 178

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
            + + RG++  + A  L R++E+ Q  +WG
Sbjct: 179 GLAVIRGRIDADTAHALSRIDEEFQAQRWG 208


>gi|417860106|ref|ZP_12505162.1| hypothetical protein Agau_C201320 [Agrobacterium tumefaciens F2]
 gi|338823170|gb|EGP57138.1| hypothetical protein Agau_C201320 [Agrobacterium tumefaciens F2]
          Length = 264

 Score =  105 bits (261), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 66/212 (31%), Positives = 113/212 (53%), Gaps = 11/212 (5%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+ V+  EA+DG G+T+ LD + L+TP+K+PL +P+  LA  +  EWD  QT+ + P
Sbjct: 31  KRFYKDVTVAEAEDG-GFTIFLDGKPLRTPAKKPLIVPSKALAGLLRDEWD-AQTEVVNP 88

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRA--PADNDLTSGVHERQVQKI 211
            +MP+ +   TA++ V      + E +++  + DL+  RA  PA       + +RQ    
Sbjct: 89  VVMPVSRHVNTAIDGVANDTQAVFEDILRFSSSDLLCYRAGDPA------ALVQRQTDHW 142

Query: 212 DPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDD-YELAAIDAIAAAAHSL 270
           DP+L W  +  G + ++       +Q    I      ++K D    LAA+  + +   S 
Sbjct: 143 DPVLDWAANVLGARFILVEGVMHREQPKEAIAAFSVTLRKYDKPIALAALHTMTSLTGSA 202

Query: 271 VIAIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           ++A+ +  G+L +EE   L  L+ED   ++WG
Sbjct: 203 ILALALAEGELTLEETWALAHLDEDWTAEQWG 234


>gi|89053117|ref|YP_508568.1| ATP12 ATPase [Jannaschia sp. CCS1]
 gi|88862666|gb|ABD53543.1| ATP12 ATPase [Jannaschia sp. CCS1]
          Length = 237

 Score =  105 bits (261), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 109/210 (51%), Gaps = 7/210 (3%)

Query: 93  GKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIR 152
            KRF+ + +  EAD   G+ V+LD R + TP K PL +PT  +A A+ AEW+ Q+ + I 
Sbjct: 6   AKRFWTEATVAEAD--GGFKVLLDGRGVNTPGKLPLVMPTRAMALAVAAEWNAQEGE-IA 62

Query: 153 PFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKID 212
           P  MP  + A +A+ERV      + + L+     DL+  RA   + LT    +RQ  + D
Sbjct: 63  PLTMPHTRSANSAIERVTPQLADVSDMLLGYAETDLLCYRAEGPDALT----QRQAAEWD 118

Query: 213 PLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVI 272
           P+L W       +    +      QE   IK ++  +++   + + A+  +     SL++
Sbjct: 119 PMLDWGAEALDARLEPRTGVMWVSQEPTAIKALDTDLRQIGPFPMTALHDLVTLTGSLIL 178

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
            + + RG++  +EA  L R++E  Q+++WG
Sbjct: 179 GLAVARGRISAKEAWRLSRIDETWQMEQWG 208


>gi|443724098|gb|ELU12261.1| hypothetical protein CAPTEDRAFT_114697 [Capitella teleta]
          Length = 255

 Score =  105 bits (261), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 115/237 (48%), Gaps = 7/237 (2%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           K+FY+  +   A+ G G+ V LD R LKTP     K+P  GLA A+  EW+  Q   I+ 
Sbjct: 8   KKFYKNATITHAE-GGGFEVNLDKRKLKTPMGNIFKVPNEGLAMAVAGEWN-AQDKIIKK 65

Query: 154 FMMPLMKLACTALER-VPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKID 212
           + M +  LA TA++     TR ++I  +++  + D +  R     +L     + Q ++ D
Sbjct: 66  YNMHITALANTAIDNPTHRTRDQVINGILEYLDTDTLCYRVEHPQELV----DLQTKEWD 121

Query: 213 PLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVI 272
            +L W+   +       + F          +     ++  +D+ L           S+ I
Sbjct: 122 AILNWIMERYHIYIEATTGFGVPTVPTETREIFRQHLQSFNDFALVGYQQAVEVVRSIFI 181

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGLS 329
           A  +    + +E+A+ L RLE D Q +KWG VE  HD+D+ + R +++SA +F+ L+
Sbjct: 182 AYALIDRHISVEKAVNLSRLELDFQTEKWGNVEWHHDVDLYEYRARLASAALFVYLN 238


>gi|452825747|gb|EME32742.1| ATP synthase mitochondrial F1 complex assembly factor 2 [Galdieria
           sulphuraria]
          Length = 311

 Score =  105 bits (261), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 117/237 (49%), Gaps = 6/237 (2%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFYE+V T E   G  + V LD + L+T + + L+     L+  + +EW+ Q +  I P
Sbjct: 71  KRFYEQVYTVERIPG-VYCVSLDGKLLRTRTGKFLESRCRELSLVVASEWEAQHSR-ILP 128

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP+  L  T+++     R + ++ L + FN D +  RA        G+  RQ    DP
Sbjct: 129 SSMPVTSLLTTSIDLTKEHRQQFLKTLSEFFNTDTICIRA----SYPEGLVFRQKVLWDP 184

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           L+ ++   +  +       FG  QE   ++ +   ++      + A+ +  +   SL+I 
Sbjct: 185 LIVFLSENWNIQIRTSEDLFGVSQERESLEKIRQYLENQSSLFITALHSATSTTKSLIIG 244

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGLSR 330
           + +    +   +A+E  R EED Q+  WG VEG HDID AD  V+++SA++   L R
Sbjct: 245 LALSEKAISTRQAMEACRCEEDFQIQYWGDVEGCHDIDRADTFVRLASASLVFSLLR 301


>gi|452821510|gb|EME28539.1| ATP synthase mitochondrial F1 complex assembly factor 2 [Galdieria
           sulphuraria]
          Length = 518

 Score =  105 bits (261), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 117/237 (49%), Gaps = 6/237 (2%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFYE+V T E   G  + V LD + L+T + + L+     L+  + +EW+ Q +  I P
Sbjct: 278 KRFYEQVYTVERIPG-VYCVSLDGKLLRTRTGKFLESRCRELSLVVASEWEAQHSR-ILP 335

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP+  L  T+++     R + ++ L + FN D +  RA        G+  RQ    DP
Sbjct: 336 SSMPVTSLLTTSIDLTKEHRQQFLKTLSEFFNTDTICIRA----SYPEGLVFRQKVLWDP 391

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           L+ ++   +  +       FG  QE   ++ +   ++      + A+ +  +   SL+I 
Sbjct: 392 LIVFLSENWNIQIRTSEDLFGVSQERESLEKIRQYLENQSSLFITALHSATSTTKSLIIG 451

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGLSR 330
           + +    +   +A+E  R EED Q+  WG VEG HDID AD  V+++SA++   L R
Sbjct: 452 LALSEKAISTRQAMEACRCEEDFQIQYWGDVEGCHDIDRADTFVRLASASLVFSLLR 508


>gi|240136941|ref|YP_002961410.1| hypothetical protein MexAM1_META1p0170 [Methylobacterium extorquens
           AM1]
 gi|418058118|ref|ZP_12696098.1| ATP12 ATPase [Methylobacterium extorquens DSM 13060]
 gi|240006907|gb|ACS38133.1| conserved hypothetical protein with putative domain ATP12 chaperone
           protein [Methylobacterium extorquens AM1]
 gi|373568327|gb|EHP94276.1| ATP12 ATPase [Methylobacterium extorquens DSM 13060]
          Length = 267

 Score =  104 bits (260), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 68/216 (31%), Positives = 105/216 (48%), Gaps = 8/216 (3%)

Query: 88  TGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQ 147
           +G  + KRFY +    EA+   G+ ++LD R   TP +RPL +P   L +A+ AEW+  Q
Sbjct: 32  SGPTLPKRFYAQAGLAEAE--GGFRLVLDGRGANTPGRRPLVVPDRVLGEALAAEWE-AQ 88

Query: 148 TDGIRPFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQ 207
            D I P  MPL +L  T ++ V   R  + E L      DLV  RA A   L +     Q
Sbjct: 89  ADVIDPRTMPLTRLVNTTIDGVVERRAAVAEDLAAFAGTDLVAYRAGAPERLVA----VQ 144

Query: 208 VQKIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDD-YELAAIDAIAAA 266
            +  DPL+ WV    G +  +       +Q +G +  +   ++  DD + LAA+  +   
Sbjct: 145 SEAWDPLVAWVAETLGARLFLAEGVMHVEQPEGSVAALRAAIEAVDDPFRLAALHTLTTL 204

Query: 267 AHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
             SLVIA+ +  G+L  ++A     ++E  Q   WG
Sbjct: 205 TGSLVIALAVLHGRLSADDAWAAAHVDETYQASVWG 240


>gi|254558794|ref|YP_003065889.1| hypothetical protein METDI0154 [Methylobacterium extorquens DM4]
 gi|254266072|emb|CAX21824.1| conserved hypothetical protein; putative domain ATP12 chaperone
           protein [Methylobacterium extorquens DM4]
          Length = 267

 Score =  104 bits (260), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 69/216 (31%), Positives = 105/216 (48%), Gaps = 8/216 (3%)

Query: 88  TGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQ 147
           TG  + KRFY +    EA+   G+ ++LD R   TP +RPL +P   L +A+ AEW+  Q
Sbjct: 32  TGPTLPKRFYAQAGLAEAE--GGFRLVLDGRGANTPGRRPLVVPDRVLGEALVAEWE-AQ 88

Query: 148 TDGIRPFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQ 207
            D I P  MPL +L  T ++ V   R  + E L      DLV  RA A   L +     Q
Sbjct: 89  ADVIDPRTMPLTRLVNTTIDGVVERRAAVAEDLAAFAGTDLVAYRAGAPERLVA----VQ 144

Query: 208 VQKIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDD-YELAAIDAIAAA 266
            +  DPL+ WV    G +  +       +Q +G +  +   ++  DD + LAA+  +   
Sbjct: 145 SEAWDPLVAWVAETLGARLFLAEGVMHVEQPEGSVAALRAAIEAVDDPFRLAALHTLTTL 204

Query: 267 AHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
             SLVIA+ +  G+L  ++A     ++E  Q   WG
Sbjct: 205 TGSLVIALAVLHGRLSADDAWAAAHVDETYQASVWG 240


>gi|218528373|ref|YP_002419189.1| ATP12 ATPase [Methylobacterium extorquens CM4]
 gi|218520676|gb|ACK81261.1| ATP12 ATPase [Methylobacterium extorquens CM4]
          Length = 267

 Score =  104 bits (260), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 68/216 (31%), Positives = 105/216 (48%), Gaps = 8/216 (3%)

Query: 88  TGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQ 147
           +G  + KRFY +    EA+   G+ ++LD R   TP +RPL +P   L +A+ AEW+  Q
Sbjct: 32  SGPTLPKRFYAQAGLAEAE--GGFRLVLDGRGANTPGRRPLVVPDRVLGEALAAEWE-AQ 88

Query: 148 TDGIRPFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQ 207
            D I P  MPL +L  T ++ V   R  + E L      DLV  RA A   L +     Q
Sbjct: 89  ADVIDPRTMPLTRLVNTTIDGVVERRAAVAEDLAAFAGTDLVAYRAGAPERLVA----VQ 144

Query: 208 VQKIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDD-YELAAIDAIAAA 266
            +  DPL+ WV    G +  +       +Q +G +  +   ++  DD + LAA+  +   
Sbjct: 145 SEAWDPLVAWVAETLGARLFLAEGVMHVEQPEGSVAALRAAIEAVDDPFRLAALHTLTTL 204

Query: 267 AHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
             SLVIA+ +  G+L  ++A     ++E  Q   WG
Sbjct: 205 TGSLVIALAVLHGRLSADDAWAAAHVDETYQASVWG 240


>gi|408785245|ref|ZP_11196992.1| hypothetical protein C241_02479 [Rhizobium lupini HPC(L)]
 gi|408488839|gb|EKJ97146.1| hypothetical protein C241_02479 [Rhizobium lupini HPC(L)]
          Length = 264

 Score =  104 bits (260), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 111/210 (52%), Gaps = 7/210 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+ V+  EA +  G+T++LD + L+TP+K+PL +P+  LA+ +  EWD  QT+ + P
Sbjct: 31  KRFYKDVTVGEAAE-EGFTILLDGKPLRTPAKKPLVVPSRSLAELLRDEWD-AQTEAVNP 88

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
            +MP+ +   TA++ V      + E +++  + DL+  RA     L +    RQ    DP
Sbjct: 89  VVMPVSRHVNTAIDGVANDTQAVFEDILRFSSSDLLCYRAGEPEALVA----RQTDHWDP 144

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDD-YELAAIDAIAAAAHSLVI 272
           +L W  +  G + ++        Q    I      +KK D    LAA+  + +   S ++
Sbjct: 145 VLDWAANVLGARFILVEGVMHRDQPREAIAAFAVTLKKYDTPIALAALHTMTSLTGSAIL 204

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           A+ +  G+L +EEA  L  L+ED   ++WG
Sbjct: 205 ALALAEGELTLEEAWALAHLDEDWTAEQWG 234


>gi|424910329|ref|ZP_18333706.1| chaperone required for the assembly of F1-ATPase [Rhizobium
           leguminosarum bv. viciae USDA 2370]
 gi|392846360|gb|EJA98882.1| chaperone required for the assembly of F1-ATPase [Rhizobium
           leguminosarum bv. viciae USDA 2370]
          Length = 264

 Score =  104 bits (259), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 120/231 (51%), Gaps = 10/231 (4%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+ V+  EA +  G+T++LD + L+TP+K+PL +P+  LA+ +  EWD  QT+ + P
Sbjct: 31  KRFYKDVTVGEAAE-EGFTILLDGKPLRTPAKKPLVVPSRSLAELLRDEWD-AQTEVVNP 88

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
            +MP+ +   TA++ V      + E +++  + DL+  RA     L +    RQ    DP
Sbjct: 89  VVMPVSRHVNTAIDGVANDTQAVFEDILRFSSSDLLCYRAGEPEALVA----RQTDHWDP 144

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDD-YELAAIDAIAAAAHSLVI 272
           +L W  +  G + ++        Q    I      +KK D    LAA+  + +   S ++
Sbjct: 145 VLDWAANVLGARFILVEGVMHRDQPREAIAAFAVTLKKYDTPIALAALHTMTSLTGSAIL 204

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHD---IDIADLRVQIS 320
           A+ +  G+L +EEA  L  L+ED   ++WG  E   D   + + D+R  ++
Sbjct: 205 ALALAEGELTLEEAWALAHLDEDWTAEQWGEDEEALDRRAVRLIDMRAAVN 255


>gi|118353420|ref|XP_001009978.1| ATP12 chaperone protein [Tetrahymena thermophila]
 gi|89291745|gb|EAR89733.1| ATP12 chaperone protein [Tetrahymena thermophila SB210]
          Length = 258

 Score =  104 bits (259), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 73/260 (28%), Positives = 133/260 (51%), Gaps = 20/260 (7%)

Query: 77  SSSVTMPMSFMTGSIVG---KRFYEKVSTREADD----GNGWTVMLDYRTLKTPSKRPLK 129
           S + T+   F  G+  G   K+FY+K + ++ ++     + + V LD + ++TP K  L 
Sbjct: 2   SLNFTIKRFFTIGTQGGQFMKKFYKKATVKKLENPVHNKHLYGVFLDGKLIRTPLKNKLA 61

Query: 130 LPTLGLAKAIGAEWDYQQTDGIRPFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQ--- 186
           LPT  LA AI  E++  Q + ++P  MP+  ++ T ++     +  I +H+    NQ   
Sbjct: 62  LPTYELAFAIAHEFN-MQNEYLKPATMPITSISRTTVDMD--IQENIRQHIEDSVNQFVR 118

Query: 187 -DLVFCRAPADNDLTSGVHERQVQKIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTV 245
            D +  R         GV   Q +K++P++++V      K     S F  + ED  I+ +
Sbjct: 119 NDTILFREEGK----LGV--IQNEKLNPVIEYVNKLMNIKLQPTDSLFSRELEDIEIQNI 172

Query: 246 ENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVE 305
           +  +   D++ L AI+       S  + + +  G L IE+A+E  RLEE+ Q++++G+VE
Sbjct: 173 QKYIASKDNWTLMAIEQATVNTKSTCLGVSLINGFLSIEQALEYSRLEENFQIEQFGMVE 232

Query: 306 GGHDIDIADLRVQISSATVF 325
           G HD++     + IS+A +F
Sbjct: 233 GSHDLEENTTLLNISTAKLF 252


>gi|114766873|ref|ZP_01445795.1| hypothetical protein 1100011001282_R2601_09532 [Pelagibaca
           bermudensis HTCC2601]
 gi|114540919|gb|EAU43979.1| hypothetical protein R2601_09532 [Roseovarius sp. HTCC2601]
          Length = 237

 Score =  103 bits (258), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 67/217 (30%), Positives = 105/217 (48%), Gaps = 7/217 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           +RFYE  +  + + G+G  + LD R + TP K PL +PT GLA+AI  EW   Q + I P
Sbjct: 7   RRFYETATATQVEGGHG--IALDGRRVMTPGKSPLVVPTRGLAEAIAEEWQ-AQGEKIDP 63

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP  + A +A+E+V   R  + + L    + DL+  RA   ++L     +RQ ++ DP
Sbjct: 64  NTMPFTRTANSAIEKVTPQRAAVADMLADYGDSDLLCYRADQPDELV----QRQSERWDP 119

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           LL W  + FG +    +      Q+   +  +       D +ELAA   + +   SLV+ 
Sbjct: 120 LLDWAAARFGARLEPRAGVIHAPQDPDALAALARQAHALDAFELAAFHDLVSLTGSLVLG 179

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDI 310
           +         E    L RL+E  Q + WG+ E   D+
Sbjct: 180 LAATDPDHDPEALWALSRLDESWQEELWGVDEEASDV 216


>gi|144899544|emb|CAM76408.1| ATP12 ATPase [Magnetospirillum gryphiswaldense MSR-1]
          Length = 235

 Score =  103 bits (258), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 72/226 (31%), Positives = 112/226 (49%), Gaps = 12/226 (5%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRF+++      D   G+ V LD R +KTP  R L++P+  LA AI  EWD  Q + I+P
Sbjct: 7   KRFHKQAGIVAVD--GGFAVQLDGRGVKTPVGRKLEVPSERLALAIAGEWD-AQGEVIKP 63

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
           + MPL +LA TAL+RV   R  I + ++     DL+  RA + +DL +     Q +   P
Sbjct: 64  YTMPLTQLATTALDRVGPERAVITDQMIAYAATDLLCYRAESPSDLVA----VQTKTWQP 119

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           LL W  ++     +V +      Q    +  +   +   D + L A  A  +A+ SLV+A
Sbjct: 120 LLDWCRTQLDAGLIVTTGVIAIDQPAASLAALRARLDGYDLWRLTAAQAACSASGSLVLA 179

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQI 319
           + +  G+L   E      L+E  QV +W     G D + AD R ++
Sbjct: 180 LALTEGRLTGAECFTASNLDEAYQVAQW-----GDDYEAADRRAEL 220


>gi|254452555|ref|ZP_05065992.1| ATP12 ATPase [Octadecabacter arcticus 238]
 gi|198266961|gb|EDY91231.1| ATP12 ATPase [Octadecabacter arcticus 238]
          Length = 240

 Score =  103 bits (258), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 67/211 (31%), Positives = 109/211 (51%), Gaps = 7/211 (3%)

Query: 92  VGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGI 151
           V KRF+  V+  E D   G+ V LD R +KTP+K  L +PT  +A A+  EW     + I
Sbjct: 5   VAKRFWTDVNVIEID--GGFAVHLDARPVKTPAKAALVVPTRSMADAVAGEWRLV-VEKI 61

Query: 152 RPFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKI 211
            P +MP+ + A  ++++V     ++   L      DL+  RA    +   G+ +RQ +  
Sbjct: 62  DPNLMPVTRSANASIDKVATQFGEVATMLAAYGGSDLLCYRA----ENPEGLVQRQTEGW 117

Query: 212 DPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLV 271
           DPLL W  + FG + V        +Q +  +  +   + +  ++ELAA   + A + SLV
Sbjct: 118 DPLLDWAHATFGARLVSTVGIMPIEQSEVDLAALAAPLFEASNFELAAFHDLIAMSGSLV 177

Query: 272 IAIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           IA+G+ +G L   EA  L R++E  Q ++WG
Sbjct: 178 IALGVAQGHLTPAEAWTLSRIDETWQAEQWG 208


>gi|209549476|ref|YP_002281393.1| ATPase [Rhizobium leguminosarum bv. trifolii WSM2304]
 gi|209535232|gb|ACI55167.1| ATP12 ATPase [Rhizobium leguminosarum bv. trifolii WSM2304]
          Length = 261

 Score =  103 bits (258), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 108/210 (51%), Gaps = 8/210 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY +V+  E +   G+ + LD + ++TP+++ L +PT  LA+ + AEW  Q  + I P
Sbjct: 31  KRFYAEVAVAEHE--GGFAITLDGKMVRTPARQVLAVPTQALARLVAAEWQAQGEE-IDP 87

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP+ +L  TAL+ V   R  I E +++  + DL+  RA     L     ERQ ++ DP
Sbjct: 88  VTMPVTRLVNTALDGVDANRQAIFEDILRFSSSDLICYRADGPELLV----ERQTERWDP 143

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQ-EDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVI 272
           ++ W  ++ G + ++       +Q  +        L +  +   LAA+  I     S ++
Sbjct: 144 VVDWAANDLGARFILVEGVMPREQPREATAAFAVTLARYDNPMALAALHTITTLTGSAIL 203

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           A+ +  G L +EEA  L  L+ED  ++ WG
Sbjct: 204 ALALAEGHLTMEEAWSLAHLDEDWTIEHWG 233


>gi|116252311|ref|YP_768149.1| chaperone protein [Rhizobium leguminosarum bv. viciae 3841]
 gi|115256959|emb|CAK08053.1| putative chaperone protein [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 261

 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 115/237 (48%), Gaps = 8/237 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY +VS   A    G+ + LD + ++TP+++ L +PT  LA+ + AEW  Q  + I P
Sbjct: 31  KRFYAEVSI--AQHEGGFAITLDGKMVRTPARQVLAVPTEALARLVAAEWQAQGEE-INP 87

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP+ +L  TAL+ V      I E +++  + DL+  RA     L     ERQ ++ DP
Sbjct: 88  MSMPVTRLVNTALDGVTANAQAIFEDILRFSSSDLICYRAEEPERLV----ERQAERWDP 143

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDD-YELAAIDAIAAAAHSLVI 272
           ++ W  ++ G + ++       +Q    I      + + D    LA +  +     S ++
Sbjct: 144 VIDWAANDLGARFILVEGVMHHEQPREAIAAFAVTLARHDSPIALATLHTVTTLTGSAIL 203

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGLS 329
           A+    G++ +EEA  +  L+ED  +++WG  E   +          ++A VF  LS
Sbjct: 204 ALAFAEGRVTVEEAWSIAHLDEDWTIERWGRDEEAEERRAKRFAEFKAAADVFFALS 260


>gi|405382857|ref|ZP_11036633.1| chaperone required for the assembly of F1-ATPase [Rhizobium sp.
           CF142]
 gi|397320618|gb|EJJ25050.1| chaperone required for the assembly of F1-ATPase [Rhizobium sp.
           CF142]
          Length = 261

 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 113/210 (53%), Gaps = 8/210 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+ VS    ++   + + LD + ++TP+++ L LP   LA+ + AEWD  Q + I P
Sbjct: 31  KRFYQTVSVVPHEEA--FAIALDGKAVRTPARQVLALPNEVLARLVAAEWD-AQAEVIDP 87

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
            MMP+ +L  TA++ V      ++E +++  + DL+  RA +  +L     +RQ ++ DP
Sbjct: 88  SMMPVTRLVNTAIDGVATDTQAVLEDILRFSSSDLLCYRAESPQELV----KRQTERWDP 143

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDD-YELAAIDAIAAAAHSLVI 272
           +L W  ++ G + ++       +Q    I    + +++ D   ELAA+  +     S ++
Sbjct: 144 VLDWAAADLGARFILVEGVMHHEQPREAIAAFGSALRRHDSALELAALHTVTTITGSALL 203

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           A+ I  G++  +EA  L  L+ED  ++ WG
Sbjct: 204 ALAIAEGEITPDEAWSLAHLDEDWTIEHWG 233


>gi|310816977|ref|YP_003964941.1| ATP12 chaperone protein [Ketogulonicigenium vulgare Y25]
 gi|385234563|ref|YP_005795905.1| ATP12 ATPase [Ketogulonicigenium vulgare WSH-001]
 gi|308755712|gb|ADO43641.1| ATP12 chaperone protein [Ketogulonicigenium vulgare Y25]
 gi|343463474|gb|AEM41909.1| ATP12 ATPase [Ketogulonicigenium vulgare WSH-001]
          Length = 235

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 105/209 (50%), Gaps = 7/209 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRF+++ +  +   G  W V+LD RTL+TP+K  L + +  LA+A+  EW   Q + IRP
Sbjct: 7   KRFWKQATISQ--QGEAWAVLLDSRTLRTPAKAHLLVGSAELAQAVADEWQ-AQGEVIRP 63

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP  +    A++ +   R  ++  +      D++  R    + L     + Q  + DP
Sbjct: 64  DTMPFTRAVNVAIDHIGEKRDAVVAEIAGYGGTDMLCYREEESDALA----QHQAAQWDP 119

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           LL W    FG + VV        Q+   +  +++ +    D  LAA+  + + + SL++ 
Sbjct: 120 LLDWAADHFGARLVVQQGIMPVAQDPIALSRLQDAVAAHSDIGLAALHDLVSLSGSLILG 179

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           + +  G+L  +EA  L RL+E+ Q+ +WG
Sbjct: 180 LAVAHGRLSADEAWTLSRLDENWQIAQWG 208


>gi|424913832|ref|ZP_18337196.1| chaperone required for the assembly of F1-ATPase [Rhizobium
           leguminosarum bv. trifolii WSM597]
 gi|392850008|gb|EJB02529.1| chaperone required for the assembly of F1-ATPase [Rhizobium
           leguminosarum bv. trifolii WSM597]
          Length = 261

 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 107/210 (50%), Gaps = 8/210 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY +V+   A    G+ + LD + ++TP+++ L +PT  LA+ + AEW  Q  + I P
Sbjct: 31  KRFYAEVAI--AGHEGGFAITLDGKMVRTPARQVLAVPTQALARLVAAEWQAQGEE-IDP 87

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP+ +L  TAL+ V   R  I E +++  + DL+  RA     L     ERQ ++ DP
Sbjct: 88  VTMPVTRLVNTALDGVDANRQAIFEDILRFSSSDLICYRADGPELLV----ERQTERWDP 143

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQ-EDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVI 272
           ++ W  ++ G + ++       +Q  +        L +  +   LAA+  I     S ++
Sbjct: 144 VVDWAANDLGARLILVEGVMPREQPREATAAFAVTLARYDNPMALAALHTITTLTGSAIL 203

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           A+ +  G L +EEA  L  L+ED  ++ WG
Sbjct: 204 ALALAEGHLTMEEAWSLAHLDEDWTIEHWG 233


>gi|449681892|ref|XP_004209949.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor
           2-like [Hydra magnipapillata]
          Length = 269

 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 62/237 (26%), Positives = 121/237 (51%), Gaps = 8/237 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY++V+ +   DG  + + LD RT+KTP  +PL +P   L  A+  EW  Q +D I  
Sbjct: 26  KRFYKEVTLKPVQDG--FLIQLDKRTIKTPLGKPLLVPCEPLGIAVANEWHMQDSD-INT 82

Query: 154 FMMPLMKLACTALER-VPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKID 212
            +MPL  +  TA++    +T+  ++  +++ F  D +   A    +L     E Q ++  
Sbjct: 83  SVMPLTVICNTAIDNPCSITKSDLVNGMLRYFQTDTICALADQPEELV----ELQAREWV 138

Query: 213 PLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVI 272
           P++ W     G   V  SS F  KQ D  I  +++ +   + +++  + +      S ++
Sbjct: 139 PIINWFSKWHGISVVSTSSLFELKQPDLSISKLKDHLMNLNRWQIYGLQSAMEITKSFIL 198

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGLS 329
            + + +  + +E+A+ L RLE + Q+ KWG VE  H+++  +  + +++  +F   +
Sbjct: 199 PMVVSQKYISVEKAVYLSRLEVEHQITKWGNVEFAHELEKQNQTIFLAAGILFYHFT 255


>gi|418296257|ref|ZP_12908101.1| hypothetical protein ATCR1_02000 [Agrobacterium tumefaciens
           CCNWGS0286]
 gi|355539689|gb|EHH08927.1| hypothetical protein ATCR1_02000 [Agrobacterium tumefaciens
           CCNWGS0286]
          Length = 264

 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 111/210 (52%), Gaps = 7/210 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+ V+  E ++G G+T++LD + L+TP+K+PL +P+  LA+ +  EWD Q+ + + P
Sbjct: 31  KRFYKDVTVGEVEEG-GFTILLDGKPLRTPAKKPLTVPSHALAELLREEWDAQK-EVVNP 88

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
            +MP+ +   TA++ V      + E +++  + DL+  RA     L +    RQ    DP
Sbjct: 89  VVMPVSRHVNTAIDGVANDTQAVFEDILRFSSSDLLCYRAGDPEALVA----RQTDHWDP 144

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDD-YELAAIDAIAAAAHSLVI 272
           +L W  +  G + ++        Q    I      +KK D    LAA+  + +   S ++
Sbjct: 145 VLDWAANVLGARFILVEGVMHEDQPREAIAAFAVTLKKYDTPIALAALHTMTSLTGSAIL 204

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           A+ +  G+L  EEA  L  L+ED   ++WG
Sbjct: 205 ALALAEGQLTQEEAWALAHLDEDWTAEQWG 234


>gi|254294407|ref|YP_003060430.1| ATP12 ATPase [Hirschia baltica ATCC 49814]
 gi|254042938|gb|ACT59733.1| ATP12 ATPase [Hirschia baltica ATCC 49814]
          Length = 242

 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 102/209 (48%), Gaps = 6/209 (2%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           K+FY++ +  +  DGN WT+ LD R LKTP+K+PL LPT  LA+A+  EW   Q + I  
Sbjct: 12  KKFYKQAAIEKLGDGN-WTISLDGRQLKTPAKKPLSLPTEELAEAVAGEW-ADQVEFIDV 69

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             M + +L   A++R PL RP++ + + +    DLV   A     L     ERQ +   P
Sbjct: 70  ATMHITRLVNVAIDRTPLARPEMADEVARYAETDLVSHLAEGPTVL----RERQQEGWAP 125

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           +  W   E     +         Q    ++         DD  L  ++       S V++
Sbjct: 126 IRDWAAQELNVFLLPVEGVMASPQPTTSLEAARQHAANLDDMRLTGLNFGLGLFGSAVLS 185

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           + + +G+L  EEA +L R++E  Q ++WG
Sbjct: 186 LAVEQGRLLAEEAFDLSRIDEIYQAEQWG 214


>gi|150396238|ref|YP_001326705.1| ATP12 ATPase [Sinorhizobium medicae WSM419]
 gi|150027753|gb|ABR59870.1| ATP12 ATPase [Sinorhizobium medicae WSM419]
          Length = 261

 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 107/210 (50%), Gaps = 7/210 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY++ S   A+DG G+ V+LD R ++TP+KRP  +P+  LA+ + AEWD  Q D I P
Sbjct: 31  KRFYKQASAAPAEDG-GYAVLLDGRPVRTPAKRPFAVPSEKLAQLLAAEWD-AQADVIDP 88

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MPL +L  TA++ V L    + + +++    DL+  RA +  +L +    RQ  + +P
Sbjct: 89  SAMPLTRLVNTAIDGVALEERAVFDDILRFAGSDLLCYRADSPKELVA----RQNDQWNP 144

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVE-NLMKKTDDYELAAIDAIAAAAHSLVI 272
           +L W     G + ++       +Q    I      L        LA +  + +   S ++
Sbjct: 145 VLDWAARTLGARFILVEGVIHQEQPAEAISAFAGGLNAFATPLGLACLHTVTSLTGSALL 204

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           ++ +  G+L  EE      ++ED Q++ WG
Sbjct: 205 SLALAMGRLSAEEVWTAAHVDEDWQIEHWG 234


>gi|255261488|ref|ZP_05340830.1| ATP12 ATPase [Thalassiobium sp. R2A62]
 gi|255103823|gb|EET46497.1| ATP12 ATPase [Thalassiobium sp. R2A62]
          Length = 241

 Score =  102 bits (253), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 63/215 (29%), Positives = 106/215 (49%), Gaps = 7/215 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRF++    ++ +   GW V LD R LKTP K  L +PT  +A+AI AEW+  Q + I P
Sbjct: 7   KRFWDTAVAKQVE--GGWGVSLDSRALKTPVKSALVVPTAQVAEAIAAEWN-AQGENIDP 63

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP  K + +A+++V   + ++ + L +    DL+  RA    D   G+ +RQ +  DP
Sbjct: 64  STMPFTKTSNSAIDKVTPQQAEVADMLAEYGGTDLLCYRA----DAPQGLVDRQAEGWDP 119

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           +L W  S      V  +      Q++  +  +   +   D +ELAA   +   + SLV+ 
Sbjct: 120 MLAWASSRLDATLVSVTGVMFSAQDETALANLRAHVHALDAFELAAFHDLVGLSGSLVLG 179

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGH 308
           +       + ++   L R++E  Q D+WG  +  H
Sbjct: 180 LAAAHAHGEADQIWGLSRIDETWQEDQWGRDDTAH 214


>gi|299135223|ref|ZP_07028414.1| ATP12 ATPase [Afipia sp. 1NLS2]
 gi|298590200|gb|EFI50404.1| ATP12 ATPase [Afipia sp. 1NLS2]
          Length = 258

 Score =  102 bits (253), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 109/225 (48%), Gaps = 13/225 (5%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFYE      A+   G+ V LD + ++TP KR L  P   LA+A+ AEW   QTD I P
Sbjct: 30  KRFYESAGV--AETPEGFAVTLDGKQVRTPGKRFLSAPVRELAEAMAAEWG-AQTDSIDP 86

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP+ +LA + ++ V      + + + K F+ DL+F RA    +L +    RQ +  DP
Sbjct: 87  LSMPVTRLANSTIDGVADDVAAVRDDIAKYFDTDLLFYRASFPEELIA----RQAEHWDP 142

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
            L+W+  E G   ++       KQ +  +K     + +T  + +AA+  +     S ++A
Sbjct: 143 ALRWLADELGAHFILAEGVMHVKQPEPAVKAARQALPET-PWAVAAMHVVTTITGSALLA 201

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQ 318
           + ++R  L  +E      ++ED    +WG      D D+   R Q
Sbjct: 202 LALYRKALTPDEVWAAAHVDEDWNSQQWGA-----DEDVTQRRAQ 241


>gi|49475762|ref|YP_033803.1| hypothetical protein BH10180 [Bartonella henselae str. Houston-1]
 gi|49238569|emb|CAF27809.1| hypothetical protein BH10180 [Bartonella henselae str. Houston-1]
          Length = 260

 Score =  101 bits (252), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 66/213 (30%), Positives = 111/213 (52%), Gaps = 8/213 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY +V     ++G G++V+LD   +KTP+KR   LPT   A  +  E++ Q+   I P
Sbjct: 31  KRFYREVKI-SCEEG-GFSVLLDGCPVKTPAKRHFCLPTEVFAAFVAEEFENQK-QVIDP 87

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP+ +L  T ++ +      + E L++    D++F RA    +L     +RQ ++ DP
Sbjct: 88  AKMPMTRLVNTVIDGIADNMQAVFEDLLRFVACDMIFYRAQTPKELV----QRQCEQWDP 143

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDD-YELAAIDAIAAAAHSLVI 272
           LL W E + G +  V       +Q    I+ V N ++K +  Y LAA+  I     S +I
Sbjct: 144 LLDWAEEKLGARFHVTEGLMHIEQSRESIQAVSNYLRKVESPYMLAALHTITTLTGSALI 203

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVE 305
           A+    GK+  E A ++  L+E+  +++WG+ E
Sbjct: 204 ALAFSEGKIDSEHAWKIAHLDENWMMEQWGIDE 236


>gi|424895149|ref|ZP_18318723.1| chaperone required for the assembly of F1-ATPase [Rhizobium
           leguminosarum bv. trifolii WSM2297]
 gi|393179376|gb|EJC79415.1| chaperone required for the assembly of F1-ATPase [Rhizobium
           leguminosarum bv. trifolii WSM2297]
          Length = 261

 Score =  101 bits (252), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 106/210 (50%), Gaps = 8/210 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY  VS  E +   G+ V LD +T++TP+++ L +PT  LA+ + AEW  Q  + I P
Sbjct: 31  KRFYTDVSVAEHE--GGFAVTLDGKTVRTPARQVLAVPTEALARLVAAEWQAQGEE-IDP 87

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP+ +L  TAL+ V   R  I E +++  + DL+  RA     L +    RQ ++ DP
Sbjct: 88  LTMPVTRLVNTALDGVDANRQAIFEDILRFSSSDLICYRADGPELLVA----RQAERWDP 143

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDD-YELAAIDAIAAAAHSLVI 272
           ++ W   + G + ++       +Q           + + D    LAA+  I     S ++
Sbjct: 144 VIDWAALDLGARFILIEGVMPQEQPREATAAFAVTLARFDSPMALAALHTITTLTGSAIL 203

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           A+    G++ +EEA  L  L+ED  ++ WG
Sbjct: 204 ALATACGRVTMEEAWSLAHLDEDWTIEHWG 233


>gi|335037206|ref|ZP_08530517.1| hypothetical protein AGRO_4525 [Agrobacterium sp. ATCC 31749]
 gi|333791362|gb|EGL62748.1| hypothetical protein AGRO_4525 [Agrobacterium sp. ATCC 31749]
          Length = 264

 Score =  101 bits (251), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 110/210 (52%), Gaps = 7/210 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+ V+  E ++G G+T++LD + L+TP+K+PL  P+  LA  +  EWD Q+ + + P
Sbjct: 31  KRFYKDVTVGETEEG-GFTILLDGKPLRTPAKKPLVAPSRALADLLRDEWDAQK-EVVNP 88

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
            +MP+ +   TA++ +      + E +++  + DL+  RA     L +    RQ    DP
Sbjct: 89  VVMPVSRHVNTAIDGIASDTQAVFEDILRFSSSDLLCYRAGDPEALVA----RQTDHWDP 144

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDD-YELAAIDAIAAAAHSLVI 272
           +L W  +  G + ++        Q    I      +KK D    LAA+  + +   S ++
Sbjct: 145 VLDWATNVLGARFILVEGVMHRDQPREAIAAFAVTLKKYDTPIALAALHTMTSLTGSAIL 204

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           A+ +  G+L +EEA  L  L+ED   ++WG
Sbjct: 205 ALALAEGELTLEEAWALAHLDEDWTAEQWG 234


>gi|392576957|gb|EIW70087.1| hypothetical protein TREMEDRAFT_29554 [Tremella mesenterica DSM
           1558]
          Length = 290

 Score =  101 bits (251), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 120/245 (48%), Gaps = 10/245 (4%)

Query: 89  GSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLG--LAKAIGAEWDYQ 146
             I  +RF++ V+     +G+ + + LD+R LKTP+   L +P     LA  I  EW+  
Sbjct: 52  AEITLRRFWKTVNIHSEPNGH-YLIALDHRHLKTPAGTKLVIPKERRLLAVLIANEWE-N 109

Query: 147 QTDGIRPFMMPLMKLACTALE--RVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVH 204
           Q + ++   +P+  LA  A++  R    R ++I+ LMK    D V    P D      + 
Sbjct: 110 QDEVLKQHALPVTSLASRAIDGLRDDKIRVEVIDALMKYLETDTVLF--PQDE--PPALV 165

Query: 205 ERQVQKIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIA 264
             Q +   PL  W+ +E G            +Q    +  +  ++++ D +ELAA +  A
Sbjct: 166 RMQQEHWQPLFDWLRNELGVHVQATEGLIPARQSYETLARLRRIVEEMDTWELAAFERAA 225

Query: 265 AAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATV 324
            A+ S +IA+ + +G+L  ++A +   +E   Q+++WG VE  HD+D  D+R  + SA  
Sbjct: 226 YASKSFIIALALCKGRLTADQAADASHVEVRSQIERWGEVEDTHDVDYQDIRRALGSAAC 285

Query: 325 FLGLS 329
            +  S
Sbjct: 286 MVSRS 290


>gi|114798619|ref|YP_759728.1| ATP12 chaperone family protein [Hyphomonas neptunium ATCC 15444]
 gi|114738793|gb|ABI76918.1| ATP12 chaperone family protein [Hyphomonas neptunium ATCC 15444]
          Length = 242

 Score =  101 bits (251), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 100/209 (47%), Gaps = 6/209 (2%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY  V T E  +G GW ++LD R++KTP +  L+LPT  LA+ +  EW  QQT  I  
Sbjct: 12  KRFYTDV-TAEPAEGGGWQILLDGRSVKTPGRALLRLPTEALAQEVAEEWAEQQTY-IHL 69

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             M L +LA  A++R P  R ++ E + +    DL+ C    +    + + E + +   P
Sbjct: 70  IGMHLTRLANVAIDRTPEIREEMAEEVARYCETDLL-CHIAEEPFELAALEEARWR---P 125

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           +L W   + G   +         Q    ++   +     DD+ L A+        S V+A
Sbjct: 126 VLDWAGEKLGVILMTTEGIIAAPQPGASLQAARDYALGLDDFRLTALVFACGVFGSAVLA 185

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           + +  G L  E A  L R++ED Q  KWG
Sbjct: 186 MALVEGALTAESAFHLSRVDEDWQAQKWG 214


>gi|254476219|ref|ZP_05089605.1| ATP12 ATPase [Ruegeria sp. R11]
 gi|214030462|gb|EEB71297.1| ATP12 ATPase [Ruegeria sp. R11]
          Length = 235

 Score =  101 bits (251), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 106/209 (50%), Gaps = 7/209 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRF+++V+   AD   G+ V LD R +KTP+K  L +P+  +A AI AEWD  QT+ + P
Sbjct: 7   KRFWKEVTV--ADTEGGFAVELDGRRIKTPAKAALVVPSRAMADAIAAEWD-AQTESVDP 63

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP  + A  A+++V     ++ + L    + DL+  RA +  +L +    RQ +  DP
Sbjct: 64  STMPTTRSANAAIDKVSHQHGEVSDMLADYGDSDLLCYRADSPAELVA----RQAESWDP 119

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
            L W E   G K    S      Q+   +  +  L+ +   ++LAA   + + + SLV+ 
Sbjct: 120 ALAWAEEVLGAKLAPRSGILHVAQDAAAVARLRGLVHEMSAFQLAAFHDLVSMSGSLVLG 179

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
               R     EE  ++ RL+E  Q ++WG
Sbjct: 180 FAAARDWRPAEEIWQISRLDELWQEEQWG 208


>gi|384536622|ref|YP_005720707.1| ATP12 ATPase [Sinorhizobium meliloti SM11]
 gi|336033514|gb|AEH79446.1| ATP12 ATPase [Sinorhizobium meliloti SM11]
          Length = 261

 Score =  100 bits (250), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 65/213 (30%), Positives = 112/213 (52%), Gaps = 7/213 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY++ S   ADDG G+ V+LD R+++TP+KR   +PT  LA  + AEWD  QTD I P
Sbjct: 31  KRFYKQASAAPADDG-GYAVLLDGRSVRTPAKRAFTVPTEKLAGLLAAEWD-AQTDVIDP 88

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MPL ++  TA++ V L    + + +++    DL+  RA +  +L +    RQ +  +P
Sbjct: 89  SAMPLTRIVNTAIDGVALDDRAVFDDILRFVGSDLLCYRADSPKELVA----RQNEHWNP 144

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQ-EDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVI 272
           ++ W     G + ++       +Q  + +    E L        LA +  + +   S ++
Sbjct: 145 IIDWAARTLGARFILVEGVIHQEQPAEAVSAFAEGLRGFATPLGLACLHTVTSLTGSALL 204

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVE 305
           A+ +  G+L  E+A     ++ED Q+++WG  E
Sbjct: 205 ALALAMGRLSAEQAWAAAHVDEDWQIEQWGTDE 237


>gi|198434710|ref|XP_002131815.1| PREDICTED: similar to ATP synthase mitochondrial F1 complex
           assembly factor 2 [Ciona intestinalis]
          Length = 272

 Score =  100 bits (250), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 59/236 (25%), Positives = 118/236 (50%), Gaps = 8/236 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           ++FY++     +D   G+ + LD R L+TP+   +KLPT  LA+A+  EW+  Q   ++ 
Sbjct: 27  EKFYKEARICHSD--GGFEINLDNRKLRTPNGNIVKLPTESLAQAVSVEWN-NQNKVLKL 83

Query: 154 FMMPLMKLACTALERVPLTRPK-IIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKID 212
             MPL  L  +A+E  P    K ++       + D + CR     +L     + Q ++ D
Sbjct: 84  DQMPLTTLCFSAVENKPTISAKTLVSSCFNYLHTDTILCRINEPPEL----EKFQSERWD 139

Query: 213 PLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVI 272
           P++ W+      +    S F      +     +   +   + + +   + + ++  SL++
Sbjct: 140 PMVNWLMKRHSIQVTPSSGFAMPVISENAEPVLSRYLLSYNYWSIIGFERMVSSLKSLIV 199

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGL 328
            + +   ++ +EEA+ L RLE + Q+ KWG +   HDI++A+ R++ ++A +F+ L
Sbjct: 200 PLALVDREISVEEAVSLSRLELEYQISKWGNIAWHHDIELAESRMKTAAAVMFIQL 255


>gi|99080134|ref|YP_612288.1| ATP12 ATPase [Ruegeria sp. TM1040]
 gi|99036414|gb|ABF63026.1| ATP12 ATPase [Ruegeria sp. TM1040]
          Length = 234

 Score =  100 bits (249), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 106/209 (50%), Gaps = 7/209 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRF++ VS  E  D +G+ V LD R +KTP+K  L +PT  LA AI AEWD Q+ + I P
Sbjct: 7   KRFWKAVSVEE--DDSGFAVALDGRRVKTPAKTALLVPTRALADAIAAEWDAQE-EQIDP 63

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP  + A  A+++V +   ++ + L +  + DL+  RA +   L +    RQ +  D 
Sbjct: 64  LSMPYTRSANAAIDKVAVQFAEVADMLAEYGDSDLLCYRAESPEGLVA----RQSESWDA 119

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
            L W E   G + +  +      Q+   ++T+   + +   ++LAA   +     SL++ 
Sbjct: 120 ALDWAEGALGARLLPRAGILHAPQDSAALETLRTRVHQMTPFQLAAFHDLVGLTGSLILG 179

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
                G   ++E  E+ R++E  Q + WG
Sbjct: 180 FATAEGWRALDEIWEISRIDERWQEELWG 208


>gi|86357849|ref|YP_469741.1| hypothetical protein RHE_CH02234 [Rhizobium etli CFN 42]
 gi|86281951|gb|ABC91014.1| hypothetical conserved protein [Rhizobium etli CFN 42]
          Length = 261

 Score =  100 bits (249), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 114/237 (48%), Gaps = 8/237 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY +V+   AD   G+ + LD + ++TP+++ L +PT  LA+ + AEW  Q  + I P
Sbjct: 31  KRFYAEVAV--ADHEGGFAITLDGKMVRTPARQVLAVPTEALAQLVAAEWQAQGQE-IDP 87

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP+ +L  TAL+ V      I E +++  + DL+  RA     L     ERQ ++ DP
Sbjct: 88  VTMPVTRLVNTALDGVATNAQAIFEDILRFSSSDLLCYRADGPELLV----ERQRERWDP 143

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQ-EDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVI 272
           ++ W  ++ G + ++       +Q  +        L +      LAA+  I     S ++
Sbjct: 144 VIDWAANDLGARFILIEGVMHHEQPREATAAFGVTLARHQGPMALAALHTITTLTGSAIL 203

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGLS 329
           A+    G+L +EE   L  L+ED  ++ WG  E   +          ++A VF  LS
Sbjct: 204 ALAFAEGRLTVEEVWSLAHLDEDWTIEHWGRDEEAEERRAKRYAEFKAAADVFFALS 260


>gi|395782057|ref|ZP_10462465.1| hypothetical protein MCY_00862 [Bartonella rattimassiliensis 15908]
 gi|395419789|gb|EJF86079.1| hypothetical protein MCY_00862 [Bartonella rattimassiliensis 15908]
          Length = 260

 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 109/211 (51%), Gaps = 8/211 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY +V    A +  G+T++LD R +KTP++R   +PT   A+ +  E++ Q+   + P
Sbjct: 31  KRFYGQVKI--ACEEGGFTILLDERPVKTPARRHFHVPTEAFAELVVKEFESQK-QVVDP 87

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP+ +L  T ++ +      I E L++    D+VF RA    +L     ++Q ++ DP
Sbjct: 88  AKMPMTRLVNTVIDGIADDMQVIFEDLLRFVACDMVFYRAQTPKELV----QKQSKQWDP 143

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDD-YELAAIDAIAAAAHSLVI 272
           LL W E + G +  V       +Q    I  V N ++K    Y LAA+  +     S +I
Sbjct: 144 LLDWAEEKLGARFYVTEGLMHIEQSPEAIHAVSNYLRKVKSPYMLAALHMMTTLTGSALI 203

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWGL 303
           A+ +  G + ++ A  +  L+ED  +++WG+
Sbjct: 204 ALAVAAGNIDVDHAWSIAHLDEDWMMEQWGI 234


>gi|218514819|ref|ZP_03511659.1| putative chaperone protein [Rhizobium etli 8C-3]
          Length = 237

 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 113/237 (47%), Gaps = 8/237 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY +V+  E +   G+ + LD + ++TP+++ L +PT  LA+ + AEW   Q + I P
Sbjct: 7   KRFYAEVAVAEHE--GGFAITLDGKMVRTPARQVLAVPTEALAQLVAAEW-RAQGEEIDP 63

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP  +L  TAL+ V      I E +++  + DL+  RA     L     ERQ Q+ DP
Sbjct: 64  VTMPATRLVNTALDGVATNAQAIFEDILRFSSSDLLCYRADGPELLV----ERQRQRWDP 119

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQ-EDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVI 272
           ++ W  ++ G + ++       +Q  +        L +      LAA+  I     S ++
Sbjct: 120 VIDWAANDLGARFILIEGVMHHEQPREATAAFAVTLARHQSPMALAALHTITTLTGSAIL 179

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGLS 329
           A+    G+L +EE   L  L+ED  ++ WG  E   +          ++A VF  LS
Sbjct: 180 ALAFAEGRLTVEEVWSLAHLDEDWTIEHWGRDEEAEERRAKRFVEFKAAADVFFALS 236


>gi|417104035|ref|ZP_11961265.1| putative chaperone protein [Rhizobium etli CNPAF512]
 gi|327191040|gb|EGE58093.1| putative chaperone protein [Rhizobium etli CNPAF512]
          Length = 261

 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 113/237 (47%), Gaps = 8/237 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY +V+  E +   G+ + LD + ++TP+++ L +PT  LA+ + AEW   Q + I P
Sbjct: 31  KRFYAEVAVAEHE--GGFAITLDGKMVRTPARQVLAVPTEALAQLVAAEW-RAQGEEIDP 87

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP  +L  TAL+ V      I E +++  + DL+  RA     L     ERQ Q+ DP
Sbjct: 88  VTMPATRLVNTALDGVATNAQAIFEDILRFSSSDLLCYRADGPELLV----ERQRQRWDP 143

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQ-EDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVI 272
           ++ W  ++ G + ++       +Q  +        L +      LAA+  I     S ++
Sbjct: 144 VIDWAANDLGARFILIEGVMHHEQPREATAAFAVTLARHQSPMALAALHTITTLTGSAIL 203

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGLS 329
           A+    G+L +EE   L  L+ED  ++ WG  E   +          ++A VF  LS
Sbjct: 204 ALAFAEGRLTVEEVWSLAHLDEDWTIEHWGRDEEAEERRAKRFVEFKAAADVFFALS 260


>gi|15888797|ref|NP_354478.1| conserved hypothetical protein [Agrobacterium fabrum str. C58]
 gi|15156553|gb|AAK87263.1| conserved hypothetical protein [Agrobacterium fabrum str. C58]
          Length = 264

 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 110/210 (52%), Gaps = 7/210 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+ V+  + ++G G+T++LD + L+TP+K+PL  P+  LA  +  EWD Q+ + + P
Sbjct: 31  KRFYKDVTVADVEEG-GFTILLDGKPLRTPAKKPLVAPSRALADLLRDEWDAQK-EVVNP 88

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
            +MP+ +   TA++ +      + E +++  + DL+  RA     L +    RQ    DP
Sbjct: 89  VVMPVSRHVNTAIDGIASDTQAVFEDILRFSSSDLLCYRAGDPEALVA----RQTDYWDP 144

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDD-YELAAIDAIAAAAHSLVI 272
           +L W  +  G + ++        Q    I      +KK D    LAA+  + +   S ++
Sbjct: 145 VLDWATNVLGARFILVEGVMHRDQPREAIAAFAVTLKKYDTPIALAALHTMTSLTGSAIL 204

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           A+ +  G+L +EEA  L  L+ED   ++WG
Sbjct: 205 ALALAEGELTLEEAWALAHLDEDWTAEQWG 234


>gi|91977595|ref|YP_570254.1| ATP12 ATPase [Rhodopseudomonas palustris BisB5]
 gi|91684051|gb|ABE40353.1| ATP12 ATPase [Rhodopseudomonas palustris BisB5]
          Length = 261

 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 117/250 (46%), Gaps = 18/250 (7%)

Query: 88  TGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQ 147
           T + + KRFY +    EA DG  + + LD R +KTPS+  L  PT  LA+AI AEW  QQ
Sbjct: 24  TRTALPKRFYTEAGITEAADG--FAITLDGRGVKTPSRNALTAPTRELAEAIAAEWQAQQ 81

Query: 148 TDGIRPFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQ 207
            + I P  MPL +LA + ++ V      + + + K F  DL+F RA    +L +     +
Sbjct: 82  -ELIDPTTMPLTRLANSVIDGVVGRVEAVRDDVAKYFGSDLLFYRASHPEELIA----LE 136

Query: 208 VQKIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAA 267
            Q  DP+L W   EFG   ++        Q +  I      M + D + + A   +    
Sbjct: 137 AQHWDPVLFWAADEFGAHFILAEGIVHVSQPEPAIAAARGAMPQ-DPWSVGAFHVVTTIT 195

Query: 268 HSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQ-----ISSA 322
            S ++A+ + RG    ++      ++ED  + +WGL     D ++A  R        ++A
Sbjct: 196 GSALLALALVRGLRDPDQVWTAAHVDEDWNIARWGL-----DEEVAARRAAREIEFKAAA 250

Query: 323 TVFLGLSRRN 332
            V   L+RR 
Sbjct: 251 QVLAALTRRG 260


>gi|254461156|ref|ZP_05074572.1| ATP12 ATPase [Rhodobacterales bacterium HTCC2083]
 gi|206677745|gb|EDZ42232.1| ATP12 ATPase [Rhodobacteraceae bacterium HTCC2083]
          Length = 236

 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/217 (31%), Positives = 104/217 (47%), Gaps = 7/217 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRF+E  +  E +   G+TV LD R +KTP K  L +PTL +A+A+  EWD  Q +G+ P
Sbjct: 7   KRFWEVAAAVEVE--GGFTVHLDGRAIKTPGKAHLIVPTLVMAEAMALEWD-AQVEGVNP 63

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP+ K A +A+++V      + + L +    DL+  RA    +L +    RQ    DP
Sbjct: 64  ETMPVTKSANSAVDKVTPQFDVVADMLGEYAGTDLLCYRASQPAELVA----RQEAAWDP 119

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           LL W    F       S      Q +  +  +   + K   +EL A+  +     S VI 
Sbjct: 120 LLAWCTRVFAAPLTPVSGVMFAPQSESSLHILRAALSKLSAFELTAMHDLITLPGSFVIG 179

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDI 310
           +   +G     E  EL RL+E  Q ++WGL E   D+
Sbjct: 180 LAAMKGYATPAELWELSRLDERYQQEQWGLDEEAEDM 216


>gi|325292803|ref|YP_004278667.1| ATP12 ATPase [Agrobacterium sp. H13-3]
 gi|418406959|ref|ZP_12980278.1| ATP12 ATPase [Agrobacterium tumefaciens 5A]
 gi|325060656|gb|ADY64347.1| ATP12 ATPase [Agrobacterium sp. H13-3]
 gi|358007452|gb|EHJ99775.1| ATP12 ATPase [Agrobacterium tumefaciens 5A]
          Length = 264

 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 108/210 (51%), Gaps = 7/210 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+ V+  + +DG G+T+ LD + L+TP+K+PL LP+  LA  +  EWD Q+ + + P
Sbjct: 31  KRFYKDVTVADVEDG-GFTIHLDGKPLRTPAKKPLVLPSKALADLLRDEWDAQK-EVVNP 88

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
            +MP+ +   TA++ +      + E +++  + DL+  RA     L +    RQ    DP
Sbjct: 89  VVMPVSRHVNTAIDGIASDTQAVFEDILRFSSSDLLCYRAGQPEALVA----RQADHWDP 144

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDD-YELAAIDAIAAAAHSLVI 272
           ++ W  +  G + ++        Q    +      +KK D    LAA+  + +   S ++
Sbjct: 145 VIDWAANVLGARFILVEGVMHRDQPREAVAAFAVTLKKYDTPIALAALHTMTSLTGSAIL 204

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           A+ +  G+L +EE   L  L+ED   + WG
Sbjct: 205 ALALAEGQLTLEETWALAHLDEDWTAEHWG 234


>gi|395779786|ref|ZP_10460255.1| hypothetical protein MCW_00342 [Bartonella washoensis 085-0475]
 gi|395420161|gb|EJF86446.1| hypothetical protein MCW_00342 [Bartonella washoensis 085-0475]
          Length = 262

 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 119/231 (51%), Gaps = 12/231 (5%)

Query: 74  SSSSSSVTMPMSFMTGSIVGKRFYEKVS-TREADDGNGWTVMLDYRTLKTPSKRPLKLPT 132
           + +SS   MP   ++ S + KRFY++V  TRE     G++++LD   +KTP++RP  +P 
Sbjct: 13  NKNSSVQKMPQ--LSCSSLPKRFYKEVKITREE---GGFSILLDKYPVKTPARRPFLVPK 67

Query: 133 LGLAKAIGAEWDYQQTDGIRPFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCR 192
              A  +  E++ Q+   I P  MP+ +   T ++ +      I E L++    D++F R
Sbjct: 68  EACAALVAQEFESQK-QVIDPIKMPITRFVNTVIDGIADDMQVIFEDLLRFVACDMIFYR 126

Query: 193 APADNDLTSGVHERQVQKIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKT 252
           A    +L     +RQ ++ DPLL WVE + G +  +       +Q    I+ V N ++K 
Sbjct: 127 AQTPKELV----QRQCEQWDPLLDWVEEKLGSRFHLAEGLMHIEQPREAIQAVSNYLRKV 182

Query: 253 DD-YELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
              Y LAA+  +     S +IA+    GK+  + A ++  L+E+  +++WG
Sbjct: 183 QSPYILAALHTMTTLTGSALIALAFAAGKINSDHAWDIAHLDENWMMEQWG 233


>gi|395787558|ref|ZP_10467157.1| hypothetical protein ME7_00492 [Bartonella birtlesii LL-WM9]
 gi|395411073|gb|EJF77608.1| hypothetical protein ME7_00492 [Bartonella birtlesii LL-WM9]
          Length = 260

 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 108/210 (51%), Gaps = 8/210 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY +V+   A +  G++++LD   +KTP+KR   LPT   AK I  E+  Q+   I P
Sbjct: 31  KRFYREVTI--ACEKGGFSLLLDGCPIKTPAKRHFLLPTEAFAKFIAQEFTNQKR-VIDP 87

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP+ +L  T ++ +      + E L++    D++F RA    +L     +RQ ++ DP
Sbjct: 88  AKMPMTRLVNTVIDGIADDMQVVFEDLLRFVACDMIFYRAQTPKELV----QRQCEQWDP 143

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDD-YELAAIDAIAAAAHSLVI 272
           LL W E + G +  +       +Q    ++ V N ++K +  Y LAA+  +     S +I
Sbjct: 144 LLNWAEEKLGARFHITEGLMHVEQSREALQAVSNYLRKVESPYILAALHTMTTLTGSALI 203

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           A+ +   K+ ++ A  +  L+ED  +++W 
Sbjct: 204 ALAVMEEKISVDHAWSIAHLDEDWMIEQWS 233


>gi|86135802|ref|ZP_01054381.1| hypothetical protein MED193_16804 [Roseobacter sp. MED193]
 gi|85826676|gb|EAQ46872.1| hypothetical protein MED193_16804 [Roseobacter sp. MED193]
          Length = 234

 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 105/212 (49%), Gaps = 7/212 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRF+++    E +   G++V LD R LKTP+K  L LP+  +A+AI  EWD  Q +GI P
Sbjct: 7   KRFWKEAKAVEVE--GGFSVHLDGRGLKTPAKTSLILPSRAMAEAIAKEWD-AQVEGINP 63

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP  + A  A+++V     ++ + L    + DL+  RA +  +L     +RQ    DP
Sbjct: 64  QTMPYTRSANAAIDKVANQHGEVADMLADYGDSDLLCYRAESPQELV----KRQADHWDP 119

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
            L W E   G +           Q+   +K +   +   D++ LAA   + + + SLV+ 
Sbjct: 120 ALSWAEEVLGARLETRHGLLHSGQDPAALKVLRQAVHALDNFRLAAFQDLVSMSGSLVLG 179

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWGLVE 305
               +     ++  ++ RL+E  Q ++WG+ E
Sbjct: 180 FATAQNWRTADDIWQISRLDETWQEEQWGVDE 211


>gi|56695432|ref|YP_165780.1| hypothetical protein SPO0518 [Ruegeria pomeroyi DSS-3]
 gi|56677169|gb|AAV93835.1| conserved hypothetical protein [Ruegeria pomeroyi DSS-3]
          Length = 238

 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 107/209 (51%), Gaps = 7/209 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRF+++ +   A+   G+ V LD R ++TP+K PL LPT  LA+AI AEWD Q+++ + P
Sbjct: 10  KRFWKQAAV--AETAEGYAVELDGRPVRTPAKAPLLLPTRALAEAIAAEWDAQESE-VDP 66

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP  + A  A+++V + + ++ + L    + DL+  RA +  +L     E Q Q  DP
Sbjct: 67  INMPFTRTANAAIDKVRIQQAEVADMLAAYGDSDLLCYRADSPAELV----ELQAQTWDP 122

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
            L W     G +           Q    I+T+   +   + ++LAA   + + + SLV+ 
Sbjct: 123 ALDWAAETLGVRLRPVQGVMHQPQPASAIETLTRKVHALNPFQLAAFHDLVSLSGSLVLG 182

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
                   + +E  ++ RL+E  Q ++WG
Sbjct: 183 FAAALNWRKADEIWQISRLDETWQEEQWG 211


>gi|126737041|ref|ZP_01752776.1| hypothetical protein RSK20926_11439 [Roseobacter sp. SK209-2-6]
 gi|126721626|gb|EBA18329.1| hypothetical protein RSK20926_11439 [Roseobacter sp. SK209-2-6]
          Length = 234

 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 65/217 (29%), Positives = 110/217 (50%), Gaps = 7/217 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRF+++VS  E  +G+G+ + LD R +KTP+K  L +P+  +A+AI AEWD Q+ +GI P
Sbjct: 7   KRFWKEVSVVE--EGDGFAITLDGRKVKTPAKAALVVPSRAMAEAIAAEWDAQE-EGINP 63

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP  K A  A+++V     ++   L    + DL+  RA A  +L      RQ +  DP
Sbjct: 64  ETMPCTKSANAAIDKVANQHEEVANMLADYGDSDLLCYRAEAPQELVM----RQNETWDP 119

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           +L W E+    +    S      Q+   +  +   +     ++LAA   + + + SLV+ 
Sbjct: 120 ILDWAENALNARLEPRSGLMHQPQKPEALAKLRASVHAMTPFQLAAFHDLVSMSGSLVLG 179

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDI 310
               +     EE   + RL+E  Q ++WG+ E   ++
Sbjct: 180 FAAAKDCRSPEEIWRISRLDEAWQEEQWGVDEEATEV 216


>gi|334315927|ref|YP_004548546.1| ATP12 ATPase [Sinorhizobium meliloti AK83]
 gi|407720327|ref|YP_006839989.1| hypothetical protein BN406_01118 [Sinorhizobium meliloti Rm41]
 gi|418405275|ref|ZP_12978683.1| ATP12 ATPase [Sinorhizobium meliloti CCNWSX0020]
 gi|334094921|gb|AEG52932.1| ATP12 ATPase [Sinorhizobium meliloti AK83]
 gi|359500764|gb|EHK73418.1| ATP12 ATPase [Sinorhizobium meliloti CCNWSX0020]
 gi|407318559|emb|CCM67163.1| hypothetical protein BN406_01118 [Sinorhizobium meliloti Rm41]
          Length = 261

 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/213 (30%), Positives = 112/213 (52%), Gaps = 7/213 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY++ S   ADDG G+ V+LD R+++TP+KR   +PT  LA  + AEWD  QT+ I P
Sbjct: 31  KRFYKQASAAPADDG-GYAVLLDGRSVRTPAKRAFTVPTEKLAGLLAAEWD-AQTEVIDP 88

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MPL ++  TA++ V L    + + +++    DL+  RA +  +L +    RQ +  +P
Sbjct: 89  SAMPLTRIVNTAIDGVALDDRAVFDDILRFVGSDLLCYRADSPKELVA----RQNEHWNP 144

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQ-EDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVI 272
           ++ W     G + ++       +Q  + +    E L        LA +  + +   S ++
Sbjct: 145 IIDWAARTLGARFILVEGVIHQEQPAEAVSAFAEGLRGFATPLGLACLHTVTSLTGSALL 204

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVE 305
           A+ +  G+L  E+A     ++ED Q+++WG  E
Sbjct: 205 ALALAMGRLSAEQAWAAAHVDEDWQIEQWGTDE 237


>gi|241204805|ref|YP_002975901.1| ATP12 ATPase [Rhizobium leguminosarum bv. trifolii WSM1325]
 gi|240858695|gb|ACS56362.1| ATP12 ATPase [Rhizobium leguminosarum bv. trifolii WSM1325]
          Length = 261

 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 111/237 (46%), Gaps = 8/237 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY  VS  E +   G+ + LD + ++TP+++ L +PT  LA+ + AEW  Q  + I P
Sbjct: 31  KRFYTDVSVAEHE--GGFAITLDGKLVRTPARQVLAVPTEALARLVAAEWQAQGEE-INP 87

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP+ +L  TAL+ V      I E +++    DL+  RA     L     ERQ +  DP
Sbjct: 88  VSMPVTRLVNTALDGVAANAQAIFEDILRFSASDLICYRAEEPELLV----ERQAEHWDP 143

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQ-EDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVI 272
           ++ W  ++ G + ++       +Q  +        L +      LAA+  +     S ++
Sbjct: 144 VIDWAANDLGARFILVEGVMPQEQPREATAAFAVTLARYDSPMALAALHTVTTLTGSAIL 203

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGLS 329
           A+    G++ +EEA  L  L+ED  ++ WG  E              ++A VF  LS
Sbjct: 204 ALAFAEGRVTVEEAWSLAHLDEDWTIEHWGSDEEAEQRRAKRFAEFKAAADVFFALS 260


>gi|85703850|ref|ZP_01034953.1| hypothetical protein ROS217_12666 [Roseovarius sp. 217]
 gi|85671170|gb|EAQ26028.1| hypothetical protein ROS217_12666 [Roseovarius sp. 217]
          Length = 240

 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/241 (31%), Positives = 117/241 (48%), Gaps = 10/241 (4%)

Query: 93  GKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDG-I 151
            KRF+++    E D G G  V LD R ++TP+K  L +PT  LA+AI AEWD Q  DG I
Sbjct: 6   AKRFWKEAGVVEDDAGFG--VRLDGRVVRTPAKATLIVPTRALAEAIAAEWDAQ--DGKI 61

Query: 152 RPFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKI 211
            P  MP  + A  AL++V   R +++E L    + DL+  RA +  +L     ++Q +  
Sbjct: 62  DPNTMPCTRSANAALDKVAPQRDEVVEMLAAYGDSDLICYRAASPEELI----KKQAEAW 117

Query: 212 DPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLV 271
           DPLL W ES    K +         Q+   I  ++  ++  D + L A   + + + SLV
Sbjct: 118 DPLLDWTESVLSVKLLPVVGVVHVPQDAQAISLLKAHVEALDTWALTAFHDLVSMSGSLV 177

Query: 272 IAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGLSRR 331
           I           +   +L R++E  Q ++WG  E   ++  A  +     A  F  LSR+
Sbjct: 178 IGFAALDDLYPADALWDLSRVDETWQAEQWGKDEEAEEM-AARKQSDFLHAKRFYDLSRK 236

Query: 332 N 332
           +
Sbjct: 237 D 237


>gi|329889171|ref|ZP_08267514.1| ATP12 chaperone family protein [Brevundimonas diminuta ATCC 11568]
 gi|328844472|gb|EGF94036.1| ATP12 chaperone family protein [Brevundimonas diminuta ATCC 11568]
          Length = 253

 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/212 (32%), Positives = 100/212 (47%), Gaps = 7/212 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRF++     EA DG GW V+LD R  KTP+   + LPT   A+ +  EW   Q + + P
Sbjct: 25  KRFWKSAGV-EARDG-GWIVLLDGRAPKTPAGNAIVLPTEAAARLVADEWS-AQGEHMTP 81

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP  +LA TA++RV  TR  + E + +    D V C      +  SG+ ERQ  +  P
Sbjct: 82  ATMPATRLASTAIDRVSQTRGPVAEEIARYAGSD-VLCYL---AETPSGLIERQQAEWGP 137

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
              W   E G +           Q    +  VE L  + DD+ L  +        S V+ 
Sbjct: 138 WRDWAARELGVELHTVEGIIHRPQAPEALARVEVLALEMDDFALTGLATAVPLFGSAVLG 197

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWGLVE 305
           + + RG L  E A++L RL+E    ++WG+ E
Sbjct: 198 LAVQRGALAGEAALDLSRLDEAFTEERWGVDE 229


>gi|16126220|ref|NP_420784.1| hypothetical protein CC_1977 [Caulobacter crescentus CB15]
 gi|13423442|gb|AAK23952.1| conserved hypothetical protein [Caulobacter crescentus CB15]
          Length = 241

 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 66/211 (31%), Positives = 108/211 (51%), Gaps = 11/211 (5%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+  +    +   G+ + LD RT K+P+++PL  PT  L   I AEW+  Q + I  
Sbjct: 12  KRFYKSAAAAPVE--QGFAIQLDGRTPKSPARKPLVAPTQALGAMIAAEWE-AQVEYIDN 68

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
            +MP  +LA TA++R+  TR ++   +      D +  RA +   L     ERQ ++   
Sbjct: 69  SLMPATRLAFTAIDRIAETRAEVAREITAYAASDHLCYRAESPRVLV----ERQEREWGA 124

Query: 214 LLKWVESEFG--FKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLV 271
           +L W  +E G  F PV  +      Q    + +VE L+   DD+ LA +   A    S V
Sbjct: 125 VLDWARAEHGLVFTPV--AGIIHTPQPPETLASVEALVLTLDDFALAGVAFAAGLFGSTV 182

Query: 272 IAIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           + + +  G+L  ++A++L RL+E  Q ++WG
Sbjct: 183 LGLAVRAGQLAGQQALDLSRLDEIYQAEQWG 213


>gi|429769322|ref|ZP_19301435.1| ATP12 chaperone protein [Brevundimonas diminuta 470-4]
 gi|429187336|gb|EKY28252.1| ATP12 chaperone protein [Brevundimonas diminuta 470-4]
          Length = 253

 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 101/210 (48%), Gaps = 7/210 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRF++     EA DG GW V+LD R  KTP+   + LPT   A+ +  EW+  Q + + P
Sbjct: 25  KRFWKSAGV-EARDG-GWIVLLDGRAPKTPAGNSIVLPTEAAARLVAEEWN-DQGEHLAP 81

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP  +LA TA++RV  TR  + E + +    D++   A    +  SG+ ERQ  +  P
Sbjct: 82  ATMPATRLASTAIDRVSQTRGPVAEEIARYAGSDVLCYLA----ETPSGLMERQQTQWGP 137

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
              W   E G +           Q    +  VE L  + +D+ L  +        S V+ 
Sbjct: 138 WRDWAARELGIELHPVEGIIHRPQAPEALARVEALSLQMNDFALTGLATAVPLFGSAVLG 197

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWGL 303
           + + RG L  E A++L RL+E    ++WG+
Sbjct: 198 LAVQRGALAGEAALDLSRLDEAFTEERWGV 227


>gi|424881734|ref|ZP_18305366.1| chaperone required for the assembly of F1-ATPase [Rhizobium
           leguminosarum bv. trifolii WU95]
 gi|392518097|gb|EIW42829.1| chaperone required for the assembly of F1-ATPase [Rhizobium
           leguminosarum bv. trifolii WU95]
          Length = 261

 Score = 98.6 bits (244), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 111/237 (46%), Gaps = 8/237 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY  VS  E +   G+ + LD + ++TP+++ L +PT  LA+ + AEW  Q  + I P
Sbjct: 31  KRFYTDVSVAEHE--GGFAITLDGKMVRTPARQVLAVPTEALARLVAAEWQAQGEE-INP 87

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP+ +L  TAL+ V      I E +++  + DL+  RA     L     ERQ +  DP
Sbjct: 88  VSMPVTRLVNTALDGVAANAQAIFEDILRFSSSDLICYRAEEPELLV----ERQAEHWDP 143

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQ-EDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVI 272
           ++ W  ++ G + ++       +Q  +        L +      LAA+  +     S ++
Sbjct: 144 VIDWAANDLGARFILVEGVMPQEQPREATAAFAVTLARYDSPMALAALHTVTTLTGSAIL 203

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGLS 329
           A+    G++  EEA  L  L+ED  ++ WG  E              ++A VF  LS
Sbjct: 204 ALAFAEGRVTTEEAWSLAHLDEDWTIEHWGSDEEAEQRRSKRFAEFKAAADVFFALS 260


>gi|148555624|ref|YP_001263206.1| ATP12 ATPase [Sphingomonas wittichii RW1]
 gi|148500814|gb|ABQ69068.1| ATP12 ATPase [Sphingomonas wittichii RW1]
          Length = 230

 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 99/209 (47%), Gaps = 7/209 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY++VS      G+   + LD R +KTP++  L LPT  LA A+ AEWD  Q + I P
Sbjct: 2   KRFYKQVSVEPVAGGHA--IRLDGRPVKTPARADLTLPTSALAHAVAAEWD-AQAEEIDP 58

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MPL  LA  A++R+          L      DL+  RA    D  + + +RQ    DP
Sbjct: 59  RRMPLTGLANAAIDRIAPDPAAFARGLAAYAETDLLCYRA----DSPAKLVDRQAASWDP 114

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           LL W    +       +      Q D  ++ +   +   D + LAA+  +     SLVIA
Sbjct: 115 LLDWARDRYDVHFETVAGIIHRPQPDETVQRLAAAVAAHDAFHLAALQPLVTITGSLVIA 174

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           + +  G++  E+A     L+E  Q ++WG
Sbjct: 175 LALAGGRIDAEQAFAAAHLDELWQAEQWG 203


>gi|451942150|ref|YP_007462787.1| hypothetical protein BVwin_08940 [Bartonella vinsonii subsp.
           berkhoffii str. Winnie]
 gi|451901537|gb|AGF75999.1| hypothetical protein BVwin_08940 [Bartonella vinsonii subsp.
           berkhoffii str. Winnie]
          Length = 260

 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 113/217 (52%), Gaps = 8/217 (3%)

Query: 87  MTGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQ 146
           ++ S + KRFY++V      +  G++V+LD   +KTP+KR   +PT   A  +  E++ Q
Sbjct: 24  LSCSPLPKRFYKEVKV--LCEERGFSVLLDGCPVKTPAKRFFIVPTEAFAMLVAEEFESQ 81

Query: 147 QTDGIRPFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHER 206
           +   I P  MP+ +L  T ++ +      + E L++    D++F RA    +L     +R
Sbjct: 82  K-QVIDPAKMPITRLVNTVIDGIADDMQSVFEDLLRFVASDMIFYRAQTPKELV----QR 136

Query: 207 QVQKIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDD-YELAAIDAIAA 265
           Q ++ DPLL W E + G +  +   F   +Q    I+ V + ++K +  Y LAA+  +  
Sbjct: 137 QCEQWDPLLDWAEEKLGARFHLTEGFMHVEQPREAIQAVSSYLRKVESPYMLAALHVMTT 196

Query: 266 AAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
              S +IA+ +F  K+  + A  +  L+ED  +++WG
Sbjct: 197 LTGSALIALAVFAKKINTDYAWNIAHLDEDWMMEQWG 233


>gi|421852913|ref|ZP_16285596.1| ATP synthase F1 mitochondrial assembly chaperone ATP12 [Acetobacter
           pasteurianus subsp. pasteurianus LMG 1262 = NBRC 106471]
 gi|371478912|dbj|GAB30799.1| ATP synthase F1 mitochondrial assembly chaperone ATP12 [Acetobacter
           pasteurianus subsp. pasteurianus LMG 1262 = NBRC 106471]
          Length = 255

 Score = 98.2 bits (243), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 121/245 (49%), Gaps = 18/245 (7%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDY--QQTDG- 150
           KRF+++       +G G+ V LD R+++ P K PL + +  LA A+ AEW    Q  DG 
Sbjct: 19  KRFWKQADV--VPEGQGFVVQLDGRSIRLPRKTPLCVTSRALADALAAEWQAAGQNADGR 76

Query: 151 IRPFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQK 210
             P  +PL  +A + +ER+P  R  ++  L+     DL+  R P +  L     + Q ++
Sbjct: 77  FSPADLPLTGIAGSMIERIPAEREGVLRSLLAYAGSDLLCYREPGEGKLA----QAQRKE 132

Query: 211 IDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSL 270
            DP L+W+  ++G       S     Q +  ++ + + M+K +  ELA +     A  SL
Sbjct: 133 WDPWLEWLRKQYGAILHTSCSVMPIVQPEESLQKLYDAMEKLNPAELAVLAVSVPALGSL 192

Query: 271 VIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIAD----LRVQISSATVFL 326
           V+ + +  G   +++ +    L+E +Q+  W     G D +I D    ++ +++ A  FL
Sbjct: 193 VLGLALVNGAGSVDDLVASATLDERMQMAVW-----GEDTEITDRIAGIQREVADAARFL 247

Query: 327 GLSRR 331
            L+R+
Sbjct: 248 ELARK 252


>gi|423712840|ref|ZP_17687138.1| hypothetical protein MCQ_01594 [Bartonella washoensis Sb944nv]
 gi|395410536|gb|EJF77090.1| hypothetical protein MCQ_01594 [Bartonella washoensis Sb944nv]
          Length = 262

 Score = 98.2 bits (243), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 115/229 (50%), Gaps = 10/229 (4%)

Query: 76  SSSSVTMPMSFMTGSIVGKRFYEKVS-TREADDGNGWTVMLDYRTLKTPSKRPLKLPTLG 134
           + +S    M   + S + KRFY++V  TRE     G++++LD   +KTP++RP  +P   
Sbjct: 13  NKNSFVQKMPQFSCSSLPKRFYKEVKITREE---GGFSILLDKYPVKTPARRPFLVPKEA 69

Query: 135 LAKAIGAEWDYQQTDGIRPFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAP 194
            A  +  E++ Q+   I P  MP+ +   T ++ +      I E L++    D++F RA 
Sbjct: 70  CAALVAQEFESQK-QVIDPIKMPITRFVNTVIDGIADDMQVIFEDLLRFVACDMIFYRAQ 128

Query: 195 ADNDLTSGVHERQVQKIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDD 254
              +L     +RQ ++ DPLL WVE + G +  +       +Q    I+ V N ++K   
Sbjct: 129 TPKELV----QRQCEQWDPLLDWVEEKLGSRFHLAEGLMHIEQPREAIQAVSNYLRKVQS 184

Query: 255 -YELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
            Y LAA+  +     S +IA+    GK+  + A  +  L+E+  +++WG
Sbjct: 185 PYILAALHTMTTLTGSALIALAFAAGKINSDHAWNIAHLDENWMMEQWG 233


>gi|392595670|gb|EIW84993.1| ATP12-domain-containing protein [Coniophora puteana RWD-64-598 SS2]
          Length = 287

 Score = 98.2 bits (243), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 116/237 (48%), Gaps = 11/237 (4%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLG--LAKAIGAEWDYQQTDGI 151
           KRF++ V  +   DG  +TV LD R +KTP+   L LPT     A  I  EW+ Q+T  +
Sbjct: 58  KRFWKTVGVKRQQDG--FTVTLDSRPIKTPAGNTLLLPTSKQLAASLIAFEWENQET-VL 114

Query: 152 RPFMMPLMKLACTALERVP--LTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQ 209
           +P  +P+  +A  A++ +    T  ++   L+   + D +  +    ND    + E Q +
Sbjct: 115 KPHALPMTSIASRAIDFMSDKNTCAELRASLLDYLHTDTICFQ----NDDPPQLVELQTK 170

Query: 210 KIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHS 269
             DPLL W    F     V SS     Q +   + +  ++ K D +ELA ++       S
Sbjct: 171 YWDPLLDWARKTFDIDLQVSSSILFSSQSEETARKLGEILAKMDPWELAVMERATYTTKS 230

Query: 270 LVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFL 326
            +I++ + +G L  E+A    ++E   Q+ +WG VE  HD+D  D+R Q+ SA   L
Sbjct: 231 FIISLALIKGHLTAEQAALASQVEVASQIQRWGEVEDSHDVDFHDVRRQLGSAACLL 287


>gi|159042873|ref|YP_001531667.1| ATP12 chaperone protein [Dinoroseobacter shibae DFL 12]
 gi|157910633|gb|ABV92066.1| ATP12 chaperone protein [Dinoroseobacter shibae DFL 12]
          Length = 234

 Score = 97.8 bits (242), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 62/216 (28%), Positives = 105/216 (48%), Gaps = 8/216 (3%)

Query: 87  MTGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQ 146
           M+G    KRF+++    EA  G G+ V LD R+++TP K  L +P+ G A+ I AEWD Q
Sbjct: 1   MSG-WAAKRFWKETDIVEA--GTGFEVRLDGRSVRTPLKTLLVVPSRGFAERIAAEWDAQ 57

Query: 147 QTDGIRPFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHER 206
             + + P  MP  + A  AL++V     ++ E L      DL+  RA   + L +    R
Sbjct: 58  D-ETVNPQSMPFTRAANAALDKVTPQHAEVAEMLSAYGGTDLLCYRATGPDTLCA----R 112

Query: 207 QVQKIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAA 266
           Q +  DPLL W    +G +  V +      Q+   +  +   +     ++L     + A 
Sbjct: 113 QAESWDPLLDWAAERYGARLRVTAGVLPVDQDPDSLARLSQAVAAFTPFQLTGFHDLVAI 172

Query: 267 AHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           + SLV+ + +  G++  E      R++E+ Q+ +WG
Sbjct: 173 SGSLVLGLAVAEGRMSAEAGFAASRIDEEWQISQWG 208


>gi|294929692|ref|XP_002779329.1| DNA-directed RNA polymerase I, putative [Perkinsus marinus ATCC
           50983]
 gi|239888392|gb|EER11124.1| DNA-directed RNA polymerase I, putative [Perkinsus marinus ATCC
           50983]
          Length = 408

 Score = 97.8 bits (242), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 69/212 (32%), Positives = 96/212 (45%), Gaps = 19/212 (8%)

Query: 94  KRFYE--KVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGI 151
           KRFY+  KV+    D+G GWTV+LD + L TP+K  L LP+ GLA A+  EW  +Q   I
Sbjct: 22  KRFYDVVKVARNGIDEGGGWTVLLDGKRLSTPAKHRLALPSEGLAFAVAEEWA-EQDKFI 80

Query: 152 RPFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDL-VFCRAPADNDLTSGVHERQVQK 210
           RP  MPLM LA T ++        ++E  +   N DL  +   P   +  S         
Sbjct: 81  RPHFMPLMALAATTIDLTAKDMSAVVERNLHYLNTDLTCYGEYPEWGEYRS--------- 131

Query: 211 IDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSL 270
                 +V  EF  K          K  +G    +   +     +EL A D ++  A S+
Sbjct: 132 ------FVSKEFDCKIASCRGISLPKHSEGADAALRAYLSTLTPWELTAFDEMSRTAKSV 185

Query: 271 VIAIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           VIA+  + G   +EEA     LEE     KWG
Sbjct: 186 VIALNYYLGNTSLEEACRASVLEELENRGKWG 217


>gi|15965140|ref|NP_385493.1| hypothetical protein SMc01277 [Sinorhizobium meliloti 1021]
 gi|384529098|ref|YP_005713186.1| ATP12 ATPase [Sinorhizobium meliloti BL225C]
 gi|433613158|ref|YP_007189956.1| Chaperone [Sinorhizobium meliloti GR4]
 gi|15074320|emb|CAC45966.1| Hypothetical protein SMc01277 [Sinorhizobium meliloti 1021]
 gi|333811274|gb|AEG03943.1| ATP12 ATPase [Sinorhizobium meliloti BL225C]
 gi|429551348|gb|AGA06357.1| Chaperone [Sinorhizobium meliloti GR4]
          Length = 261

 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 64/213 (30%), Positives = 111/213 (52%), Gaps = 7/213 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY++ S   ADDG G+ V+LD R+++TP+KR   +PT  LA  + AEWD  QT+ I P
Sbjct: 31  KRFYKQASAAPADDG-GYAVLLDGRSVRTPAKRAFTVPTEKLAGLLAAEWD-AQTEVIDP 88

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MPL ++  TA++ V L    + + +++    DL+  RA +  +L +    RQ    +P
Sbjct: 89  SAMPLTRIVNTAIDGVALDDRAVFDDILRFVGSDLLCYRADSPKELVA----RQNVHWNP 144

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQ-EDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVI 272
           ++ W     G + ++       +Q  + +    E L        LA +  + +   S ++
Sbjct: 145 IIDWAARTLGARFILVEGVIHQEQPAEAVSAFAEGLRGFATPLGLACLHTVTSLTGSALL 204

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVE 305
           A+ +  G+L  E+A     ++ED Q+++WG  E
Sbjct: 205 ALALAMGRLSAEQAWAAAHVDEDWQIEQWGTDE 237


>gi|260577147|ref|ZP_05845124.1| ATP12 ATPase [Rhodobacter sp. SW2]
 gi|259020621|gb|EEW23940.1| ATP12 ATPase [Rhodobacter sp. SW2]
          Length = 236

 Score = 97.4 bits (241), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 107/216 (49%), Gaps = 7/216 (3%)

Query: 87  MTGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQ 146
           M+G  V KRF+++ +      G  +TV LD R +KTP+K  L++PTL LA+ I AEWD Q
Sbjct: 1   MSGGWVAKRFWKQATAEPV--GAAFTVRLDGRAVKTPAKTLLEVPTLALAQEIAAEWDAQ 58

Query: 147 QTDGIRPFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHER 206
           Q   I+P  MP  ++A +AL++V     ++   +      DL+  RA     L +    R
Sbjct: 59  QGV-IKPDAMPFTRMANSALDKVAPQFAEVAGLIAAYGASDLICYRANGPEKLLA----R 113

Query: 207 QVQKIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAA 266
           Q    DPLL W  S      +  +     +Q    I  +   ++    ++LAA+  +   
Sbjct: 114 QAAAWDPLLAWSASLLEAPLITTAGVMHVEQPHASIARLAAEVQACTPFQLAALHDLVMI 173

Query: 267 AHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           + SLV  + + RG +  +   ++ R++E  Q + WG
Sbjct: 174 SGSLVGGLAVSRGWMDAQTLWDISRVDERWQAELWG 209


>gi|149203332|ref|ZP_01880302.1| hypothetical protein RTM1035_01905 [Roseovarius sp. TM1035]
 gi|149143165|gb|EDM31204.1| hypothetical protein RTM1035_01905 [Roseovarius sp. TM1035]
          Length = 240

 Score = 97.4 bits (241), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 70/240 (29%), Positives = 117/240 (48%), Gaps = 8/240 (3%)

Query: 93  GKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIR 152
            KRF+ +    E  +G+G+ V LD R+++TP+K  L +PT  LA+AI AEWD Q+   I 
Sbjct: 6   AKRFWTEAGVVE--EGDGFGVRLDGRSVRTPAKAVLSVPTRALAEAIAAEWDAQEGK-ID 62

Query: 153 PFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKID 212
           P  MP  + A  A+++V   + ++ E L    + DL+  RA + ++L     E+Q    +
Sbjct: 63  PGTMPFTRSANAAIDKVAHQKSEVAEMLAAYGDSDLICYRAVSPSELV----EKQAAAWN 118

Query: 213 PLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVI 272
           PLL W ES    K +         Q+   +  +   +   D + L A   + + + SLVI
Sbjct: 119 PLLDWTESVLSAKLLAVEGVVHVPQDVQAMARLRAHVDALDIWALTAFHDLVSLSGSLVI 178

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGLSRRN 332
                 G   ++   +L R++E  Q ++WG  E   ++  A  +     A  F  LSR++
Sbjct: 179 GFAALDGFYPVKTLWDLSRVDETWQAEQWGSDEEAEEM-AARKQSDFIHAKRFYDLSRKD 237


>gi|281210418|gb|EFA84584.1| ATP synthase mitochondrial F1 complex assembly factor 2
           [Polysphondylium pallidum PN500]
          Length = 342

 Score = 97.4 bits (241), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 120/234 (51%), Gaps = 9/234 (3%)

Query: 95  RFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRPF 154
           R+Y+ V      + NG+  +LD R +KT +++   +PT  +A AI  EW   Q   I P 
Sbjct: 102 RWYKHVGYTFDAENNGYLPLLDNRPMKTVNRKLFIVPTKEIAMAIATEW-MVQGKYIMPH 160

Query: 155 MMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDPL 214
            +PL  +A T ++  P +R K I+ L+     D V  R   D+D T  + + Q +  D L
Sbjct: 161 RLPLTTVAATCIDMNPESRQKCIDELIGHLATDQVCNR---DSDETQ-LKKLQNEAFDDL 216

Query: 215 LKWVESEFGFKPVVYSSFFG--GKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVI 272
           L W    +G KP  Y SF     +    L+KT+   ++  ++++L  +  +  +  S +I
Sbjct: 217 LHWSSDYYG-KPF-YLSFDLDLSRHPPSLLKTIREHLESMNNWQLLCMQTLTTSTKSFLI 274

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFL 326
           ++ ++  ++++++  +++ LEE+ Q + WG +  GHD+   +   +I+ A   L
Sbjct: 275 SLNLYYNRVRLDKLYKIVALEEEFQSETWGKIPFGHDLAEMETLNEIAPALFVL 328


>gi|190891933|ref|YP_001978475.1| chaperone protein [Rhizobium etli CIAT 652]
 gi|190697212|gb|ACE91297.1| putative chaperone protein [Rhizobium etli CIAT 652]
          Length = 261

 Score = 97.4 bits (241), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 112/237 (47%), Gaps = 8/237 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY +V+  E +    + + LD + ++TP+++ L +PT  LA+ + AEW   Q + I P
Sbjct: 31  KRFYAEVAVAEHE--GDFAITLDGKMVRTPARQVLAVPTEALAQLVAAEW-RAQGEEIDP 87

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP  +L  TAL+ V      I E +++  + DL+  RA     L     ERQ Q+ DP
Sbjct: 88  VTMPATRLVNTALDGVATNAQAIFEDILRFSSSDLLCYRADGPELLV----ERQRQRWDP 143

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQ-EDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVI 272
           ++ W  ++ G + ++       +Q  +        L +      LAA+  I     S ++
Sbjct: 144 VIDWAANDLGARFILIEGVMHHEQPREATAAFAVTLARHQSPMALAALHTITTLTGSAIL 203

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGLS 329
           A+    G+L +EE   L  L+ED  ++ WG  E   +          ++A VF  LS
Sbjct: 204 ALAFAEGRLTVEEVWSLAHLDEDWTIEHWGRDEEAEERRAKRFVEFKAAADVFFALS 260


>gi|418937633|ref|ZP_13491251.1| ATP12 ATPase [Rhizobium sp. PDO1-076]
 gi|375055677|gb|EHS51919.1| ATP12 ATPase [Rhizobium sp. PDO1-076]
          Length = 267

 Score = 97.1 bits (240), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 105/210 (50%), Gaps = 8/210 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY  VS   A DG+G+ + LD + +KTP+K  L LPT   A+ + AEW +Q    I P
Sbjct: 35  KRFYTIVSI--AADGDGFAIHLDGKPVKTPAKNTLCLPTREAAELVAAEWAFQDQ-VIDP 91

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP+ KLA TA++ V L   ++ + +++    DL+  RA +  +L     +RQ  + DP
Sbjct: 92  GTMPVTKLANTAIDAVSLNLSEVFDEIVRFAGNDLLCYRADSPQELV----DRQACRWDP 147

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQ-EDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVI 272
           +L WV      + ++       +Q    L     +L +  + + L+ +  +   A S ++
Sbjct: 148 VLAWVAEAHQARFILAEGVIHQEQPAQALQAYAASLERYREAFRLSCLHVVTTLAGSSIL 207

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           A+    G   ++    L  L+ED  ++ WG
Sbjct: 208 ALAFADGAFDLDAVWSLAHLDEDWTIEHWG 237


>gi|395789463|ref|ZP_10468983.1| hypothetical protein ME9_00700 [Bartonella taylorii 8TBB]
 gi|395430006|gb|EJF96058.1| hypothetical protein ME9_00700 [Bartonella taylorii 8TBB]
          Length = 260

 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/231 (26%), Positives = 118/231 (51%), Gaps = 8/231 (3%)

Query: 76  SSSSVTMPMSFMTGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGL 135
           + +++   M   +   + KRFY++V T   ++G  ++++LD   +KTP++R   +PT   
Sbjct: 13  NKNNLVQKMQKFSCQSLPKRFYKEVKTLCEEEG--FSILLDGCPVKTPARRHFLVPTAAF 70

Query: 136 AKAIGAEWDYQQTDGIRPFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPA 195
           A  +  E++ Q+   I P  MP+ +L  T ++ +      + E L++    D++F RA  
Sbjct: 71  ATLVAQEFESQK-QVIDPSKMPITRLVNTVIDGIADDMQVVFEDLLRFVACDMIFYRAQT 129

Query: 196 DNDLTSGVHERQVQKIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDD- 254
             +L     ERQ ++ DPLL W E + G +  V       +Q    I+ V N +++ +  
Sbjct: 130 PQELV----ERQREQWDPLLDWAEEKLGARFQVTEGLMHVEQSRESIQAVSNYLRQVESP 185

Query: 255 YELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVE 305
           Y LAA+  +     S +I++ +  G    + A ++  L+ED  +++WG+ E
Sbjct: 186 YTLAALHTMTTLTGSALISLAVAAGNFDADHAFDIAHLDEDWLMEQWGVDE 236


>gi|372278303|ref|ZP_09514339.1| hypothetical protein OS124_01458 [Oceanicola sp. S124]
          Length = 240

 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/220 (29%), Positives = 107/220 (48%), Gaps = 6/220 (2%)

Query: 109 NGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRPFMMPLMKLACTALER 168
            G+TV LD R ++TP+K PL +P+  LA+A+  EW   Q + + P  MPL + A +A+++
Sbjct: 20  GGYTVQLDGRPVRTPAKAPLVVPSEPLAQALAGEW-AAQAEVVVPATMPLTRTANSAIDK 78

Query: 169 VPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDPLLKWVESEFGFKPVV 228
           V + R ++ E L +  + DL+  RA +  +L +    RQ Q  DP+L W   E G +   
Sbjct: 79  VSVQRAEVAEMLAEYGDADLLCYRAESPAELVA----RQQQAWDPMLDWAADELGARLAP 134

Query: 229 YSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIE 288
                   Q+   +  +   +     +ELAA   + +   SLV+    F      E+  +
Sbjct: 135 RQGILHAPQDPEALSRLRARVHAMTPFELAAFHDLVSLTGSLVLGFASFLTTRSDEDLWQ 194

Query: 289 LIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGL 328
           L R++E  Q ++WG  E    +  A  RV    A  F+ L
Sbjct: 195 LSRIDETWQEEQWGADEEAQAV-AALKRVAFEDARQFVSL 233


>gi|414174040|ref|ZP_11428667.1| hypothetical protein HMPREF9695_02313 [Afipia broomeae ATCC 49717]
 gi|410890674|gb|EKS38473.1| hypothetical protein HMPREF9695_02313 [Afipia broomeae ATCC 49717]
          Length = 256

 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 99/212 (46%), Gaps = 8/212 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY      E  DG  +TV LD + ++TP + PL  PT  LA+ + AEWD  QTD I P
Sbjct: 30  KRFYTSAGVAEGPDG--FTVTLDGKPIRTPGRNPLAAPTRELAEVMAAEWD-AQTDNIDP 86

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MPL +LA + ++ V      + +   K F  DL+F RA   + L +    RQ +  DP
Sbjct: 87  MSMPLTRLANSVIDGVVKDVQTVADDAAKYFETDLLFYRAGFPDALIA----RQAEHWDP 142

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           +L+W   + G   ++        Q +  +    + + K D + + A         S ++A
Sbjct: 143 VLRWAADDLGAHFILAEGVIHVTQPETAVAAARSALPK-DAWPVGAFHIATTLTGSALLA 201

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWGLVE 305
           + +  G L   +      ++ED   +KWG  E
Sbjct: 202 LALKHGVLDAAQVWAAAHVDEDWNREKWGADE 233


>gi|163868587|ref|YP_001609796.1| hypothetical protein Btr_1445 [Bartonella tribocorum CIP 105476]
 gi|161018243|emb|CAK01801.1| conserved hypothetical protein [Bartonella tribocorum CIP 105476]
          Length = 260

 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 110/210 (52%), Gaps = 8/210 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY++V    A +   +T++LD R +KTP+KRP  +PT   A+ I  E++ Q+   + P
Sbjct: 31  KRFYKQVKI--ACEEGDFTILLDERPVKTPAKRPFLVPTEVFAEFIAQEFESQK-HVVDP 87

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP+ +L  T ++ +      + E L++    D++F RA    +L     ++Q ++ DP
Sbjct: 88  TKMPMTRLVNTVIDGIADDMQVVFEDLLRFVACDMIFYRAQTPKELV----QKQSEQWDP 143

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDD-YELAAIDAIAAAAHSLVI 272
           LL W E + G +  +       +Q    ++ V + ++  +  Y LAA+  +     S +I
Sbjct: 144 LLDWAEEKLGARFYLTEGLMHVEQSPEALQAVSHYLRSVESPYMLAALHMMTTLTGSALI 203

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           A+ +  GK+  + A  +  L+ED  +++WG
Sbjct: 204 ALAVAAGKIDADHAWSIAHLDEDWMMEQWG 233


>gi|395778006|ref|ZP_10458519.1| hypothetical protein MCU_00220 [Bartonella elizabethae Re6043vi]
 gi|423715931|ref|ZP_17690152.1| hypothetical protein MEE_01349 [Bartonella elizabethae F9251]
 gi|395418315|gb|EJF84642.1| hypothetical protein MCU_00220 [Bartonella elizabethae Re6043vi]
 gi|395428375|gb|EJF94452.1| hypothetical protein MEE_01349 [Bartonella elizabethae F9251]
          Length = 265

 Score = 96.7 bits (239), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 110/210 (52%), Gaps = 8/210 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY +V    A +  G+T++LD   +KTP+KR   +PT   A+ I  E++ Q+ + I P
Sbjct: 36  KRFYREVKI--ACEEGGFTILLDEHPVKTPAKRHFLVPTQVFAEFIAQEFESQK-NVIDP 92

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP+ +L  T ++ +      + E L++    D++F RA        G+ ++Q ++ DP
Sbjct: 93  ATMPMTRLVNTVIDGIADDMQVVFEDLLRFVACDMIFYRAQT----PRGLVQKQSEQWDP 148

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDD-YELAAIDAIAAAAHSLVI 272
           LL W E + G +  +       +Q    ++ V + +++ +  Y LAA+  +     S +I
Sbjct: 149 LLDWAEEKLGARFYLTEGLMHVEQSPEALQAVSHYLRRVESPYMLAALHVMTTLTGSALI 208

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           A+ +  GK+  + A  +  L+ED  +++WG
Sbjct: 209 ALAVAAGKINADHAWSIAHLDEDWMMEQWG 238


>gi|421849504|ref|ZP_16282483.1| ATP synthase F1 mitochondrial assembly chaperone ATP12 [Acetobacter
           pasteurianus NBRC 101655]
 gi|371459691|dbj|GAB27686.1| ATP synthase F1 mitochondrial assembly chaperone ATP12 [Acetobacter
           pasteurianus NBRC 101655]
          Length = 255

 Score = 96.7 bits (239), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 119/245 (48%), Gaps = 18/245 (7%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDY--QQTDG- 150
           KRF+++       +G G+ V LD R+++ P K PL + +  LA A+ AEW    Q  DG 
Sbjct: 19  KRFWKQADV--VPEGQGFVVQLDGRSIRLPRKTPLCVTSRALADALAAEWQAAGQNADGR 76

Query: 151 IRPFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQK 210
             P  +P   +A + +ER+P  R  ++  L+     DL+  R P +  L     + Q ++
Sbjct: 77  FSPADLPFTGIAGSMIERIPAEREGVLRSLLAYAGSDLLCYREPGEGKLA----QAQRKE 132

Query: 211 IDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSL 270
            DP L+W+  ++G             Q +  ++ + + M+K +  ELA +     A  SL
Sbjct: 133 WDPWLEWLRKQYGVTLHTSCGVMPIVQPEESLQKLYDAMEKLNPAELAVLAVSVPALGSL 192

Query: 271 VIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIAD----LRVQISSATVFL 326
           V+ + +  G   +++ +    L+E +Q+  W     G D +I D    ++ +++ A  FL
Sbjct: 193 VLGLALVNGAGSVDDLVASATLDERMQMAVW-----GEDTEITDRIAGIQREVADAARFL 247

Query: 327 GLSRR 331
            L+R+
Sbjct: 248 ELARK 252


>gi|402487859|ref|ZP_10834674.1| ATPase [Rhizobium sp. CCGE 510]
 gi|401813027|gb|EJT05374.1| ATPase [Rhizobium sp. CCGE 510]
          Length = 261

 Score = 96.7 bits (239), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 106/210 (50%), Gaps = 8/210 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY  VS  E +   G+ + LD + ++TP++  L +PT  LA+ + AEW  Q  + I P
Sbjct: 31  KRFYTDVSVAEHE--GGFAITLDGKMVRTPARLVLAVPTQALAQLVAAEWQAQGEE-IDP 87

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP+ +L  TAL+ +      I++ +++  + DL+  RA     L +    RQ ++ DP
Sbjct: 88  MTMPMTRLVNTALDGITGNTQAILDDILRFSSSDLICYRADGPELLVA----RQAERWDP 143

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQ-EDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVI 272
           ++ W  ++ G + ++       +Q  +        L +  D   LAA+  +     S ++
Sbjct: 144 VVDWAANDLGARFILVEGVMPREQPREATAAFAVTLARYDDPIALAALHTVTTLTGSAIL 203

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           A+    G++ +EEA  L  L+ED  ++ WG
Sbjct: 204 ALAFACGQVTMEEAWSLAHLDEDWTIEHWG 233


>gi|388584014|gb|EIM24315.1| ATP12-domain-containing protein [Wallemia sebi CBS 633.66]
          Length = 298

 Score = 96.7 bits (239), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 114/242 (47%), Gaps = 13/242 (5%)

Query: 94  KRFYEKVSTREADDGNG-WTVMLDYRTLKTPSKRPLKLPTL--GLAKAIGAEWDYQQTDG 150
           KRF++   T    + NG   V LD R L+TP+   + LP+    LA  I  EW   Q   
Sbjct: 64  KRFWK---TANVSNSNGRHIVHLDTRKLRTPAGNVIDLPSNKGALALLIAHEWQ-SQDKV 119

Query: 151 IRPFMMPLMKLACTALERVPLTRPKI--IEHLMKKFNQDLVFCRAPADNDLTSGVHERQV 208
           I+   +P+  LA  AL+       +I   + L+K F  D   C      D  S + E Q 
Sbjct: 120 IKAHALPITSLASRALDSFKDQSERIETCDKLIKYFETDAT-CYF---EDKPSQLVELQE 175

Query: 209 QKIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAH 268
           +   P+++W    +     V+ +    KQ +   K + N + + D + LAA + I     
Sbjct: 176 KHWRPIVEWANKRYNTPIHVFENVLASKQPEESRKLLHNEILQFDAFTLAAFERIVMHTK 235

Query: 269 SLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGL 328
           S +IA+ +  G L IE+A +  R+E   Q+ +WG VE  HD+D  D+R QI SA   L  
Sbjct: 236 SFLIALAVVDGHLSIEDASQAARVEVLSQIARWGEVEDSHDVDHHDIRKQIGSAACTLIE 295

Query: 329 SR 330
           SR
Sbjct: 296 SR 297


>gi|399077418|ref|ZP_10752396.1| chaperone required for the assembly of F1-ATPase [Caulobacter sp.
           AP07]
 gi|398035487|gb|EJL28728.1| chaperone required for the assembly of F1-ATPase [Caulobacter sp.
           AP07]
          Length = 241

 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/209 (32%), Positives = 103/209 (49%), Gaps = 7/209 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           +RFY+  +T  A    G+ V+LD RT K+P+K PL LPT  LA+ +  EW+  Q + I  
Sbjct: 12  RRFYKAATT--APHEGGFAVLLDGRTPKSPAKAPLVLPTQALAQLVADEWE-AQVEVIDS 68

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP  +LA TA++R+  TR ++   +      DL+   A    D  + + ERQ +    
Sbjct: 69  TAMPATRLAFTAIDRIRETRAEVAAEVAAYAGSDLLCYWA----DHPTPLVERQKRDWGG 124

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           +L W   E G      S      Q    + +VE L    DD+ LA +   A    S V++
Sbjct: 125 MLDWARVELGLNLQPVSGVIHTAQPPAALASVEALALTMDDFTLAGVAYGAGLLGSTVLS 184

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           + +  G +  + A++L RLEE  Q + WG
Sbjct: 185 LALRAGTVTGQRALDLSRLEETFQAETWG 213


>gi|170744413|ref|YP_001773068.1| ATP12 ATPase [Methylobacterium sp. 4-46]
 gi|168198687|gb|ACA20634.1| ATP12 ATPase [Methylobacterium sp. 4-46]
          Length = 262

 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 100/210 (47%), Gaps = 8/210 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY +  T EA+DG+   ++LD R  +TP +R + +P   +A+A+  EW   Q + I P
Sbjct: 33  KRFYAEAGTAEAEDGH--RLVLDGRPARTPGRRVVAVPQPAVARALAEEWG-AQAEVIDP 89

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MPL +L  TAL+ V   R  +++ +      DL+  RA     L +     Q    DP
Sbjct: 90  ARMPLTRLVNTALDGVAERREAVVQDIAAYAGSDLLAYRAGDPARLVAS----QAAAWDP 145

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDD-YELAAIDAIAAAAHSLVI 272
           +L W   E G   V+        Q  G ++ V   ++  +    L  +  +     S+++
Sbjct: 146 VLDWARDELGALIVLSEGVMHVAQPAGSLEAVRRAVEAVESPLALTGLHVMTTLTGSVLL 205

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           A+ + RG+L  EEA E   ++E  Q   WG
Sbjct: 206 ALAVLRGRLTAEEAWEAAHVDETFQASVWG 235


>gi|407976910|ref|ZP_11157805.1| ATP12 ATPase [Nitratireductor indicus C115]
 gi|407427637|gb|EKF40326.1| ATP12 ATPase [Nitratireductor indicus C115]
          Length = 264

 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 112/210 (53%), Gaps = 7/210 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+ VS  E ++G  ++++LD R ++TP    + LP+   A+ + +E+  Q  + I P
Sbjct: 33  KRFYKDVSVGEEEEG-AFSILLDGRAVRTPGATRVLLPSRAAAELVASEYAAQGQE-IDP 90

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP+ +L  TA++ V +    ++E +++    DL+  RAP+   L +     Q +  DP
Sbjct: 91  AQMPVTRLVNTAIDGVAIHTQPVVEDVLRYATSDLLCYRAPSPERLVA----MQAEAWDP 146

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVEN-LMKKTDDYELAAIDAIAAAAHSLVI 272
           +L W++S  G + ++       +Q    I  +   L ++TD + LAAI  + +   SL++
Sbjct: 147 VLDWIQSVTGAQFILAEGIVHVEQSRIAIAAISTYLRQRTDPFRLAAIHVMTSLTGSLLL 206

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           A+ +    L  +EA +   ++ED  + +WG
Sbjct: 207 ALAVEGKMLSAQEAWQAAHVDEDWNIAQWG 236


>gi|337269047|ref|YP_004613102.1| ATP12 ATPase [Mesorhizobium opportunistum WSM2075]
 gi|336029357|gb|AEH89008.1| ATP12 ATPase [Mesorhizobium opportunistum WSM2075]
          Length = 263

 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 107/210 (50%), Gaps = 8/210 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+ VS    +DG  + V LD R ++TP K  L LPT   A  +  E+   Q + I P
Sbjct: 33  KRFYKTVSVAPVEDG--FAVHLDGRPVRTPGKALLSLPTEAAAALVADEF-AAQGETINP 89

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP+M+L  TA++ V      ++E +++  + DL+  RA    D   G+ ERQ +  DP
Sbjct: 90  VTMPVMRLVNTAIDGVASDPQAVLEDILRFASSDLLCYRA----DAPQGLVERQNEHWDP 145

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTV-ENLMKKTDDYELAAIDAIAAAAHSLVI 272
           ++ W     G +  +       +Q    I  +  +L ++ D   LAAI  + +   S ++
Sbjct: 146 VIDWARGSLGARFNLAEGIIHVEQPRETIAVLGAHLAQRADPLRLAAIHVMTSLTGSALL 205

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           A+ +  G+L +E A     ++ED Q+++WG
Sbjct: 206 ALAVDFGELDVEAAWAAGHVDEDWQIEQWG 235


>gi|420241478|ref|ZP_14745607.1| chaperone required for the assembly of F1-ATPase, partial
           [Rhizobium sp. CF080]
 gi|398071003|gb|EJL62279.1| chaperone required for the assembly of F1-ATPase, partial
           [Rhizobium sp. CF080]
          Length = 237

 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 105/210 (50%), Gaps = 8/210 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY++VS  E + G+   + LD R ++TP+K  L  PT  LA+ I  EW   Q + I P
Sbjct: 5   KRFYKEVSVAEGEGGHA--IHLDGRLVRTPAKNGLVAPTARLAELIRDEW-ANQVEVIDP 61

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP+ +L  TA++ + + R  + E +++  + DL+  RA A  +L +    RQ    DP
Sbjct: 62  GNMPVTRLVNTAIDGIAVDRQAVFEDILRFSSSDLLCYRAEAPENLVA----RQNDLWDP 117

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDD-YELAAIDAIAAAAHSLVI 272
           ++ W  ++ G + ++       +Q           +KK D   ELA +  +     S ++
Sbjct: 118 IVDWAANDLGARFILVEGVMPQEQPKEATAAFAVTLKKYDTPIELAVLHTVTTLTGSAIL 177

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           A+    G+L  +EA  L  L+ED   + WG
Sbjct: 178 ALAFAEGRLTADEAWALAHLDEDWTNEHWG 207


>gi|169791680|pdb|2P4X|A Chain A, Crystal Structure Of Atp12 From Paracoccus Denitrificans
 gi|169791681|pdb|2P4X|B Chain B, Crystal Structure Of Atp12 From Paracoccus Denitrificans
 gi|170785008|pdb|2R31|A Chain A, Crystal Structure Of Atp12p From Paracoccus Denitrificans
          Length = 239

 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 100/210 (47%), Gaps = 7/210 (3%)

Query: 93  GKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIR 152
            +RF+  V   + +   GW V+LD R L+TP K+PL+LPT  LA AI  EW   Q + I 
Sbjct: 9   ARRFWASVGIHKEE--GGWAVLLDERPLRTPGKQPLRLPTEALALAIAEEWQAVQ-EVID 65

Query: 153 PFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKID 212
           P  MPL + A +A+E+V      +   L      DL+  RA A   L       Q +  D
Sbjct: 66  PNAMPLTRSANSAIEKVAPQFDAVAAMLGDYGGTDLLSYRADAPEALVRA----QAEGWD 121

Query: 213 PLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVI 272
           PL+ W  +E      +        Q+  ++  +   +   D + L A+  +     SL++
Sbjct: 122 PLIDWAATELRAPLRITHGVIPVPQDPVVLLKLRAEVASLDPFGLTALHDLVTLPGSLIL 181

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
            + + RG++    A  L R++E+ Q ++WG
Sbjct: 182 GLAVIRGRIDAPTAHALSRIDEEFQAERWG 211


>gi|395793299|ref|ZP_10472704.1| hypothetical protein MEI_01325 [Bartonella vinsonii subsp.
           arupensis Pm136co]
 gi|395431613|gb|EJF97631.1| hypothetical protein MEI_01325 [Bartonella vinsonii subsp.
           arupensis Pm136co]
          Length = 260

 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/217 (27%), Positives = 114/217 (52%), Gaps = 8/217 (3%)

Query: 87  MTGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQ 146
           ++ S + KRFY++V T   +   G++++LD   +KTP+KR   +PT   +  +  E++ Q
Sbjct: 24  LSCSPLPKRFYKEVRTLREE--GGFSILLDGCPVKTPAKRLFIVPTEAFSVLVAEEFESQ 81

Query: 147 QTDGIRPFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHER 206
           +   I P  MP+ +L  T ++ +      + E L++    D++F RA    +L     +R
Sbjct: 82  K-QVIDPAKMPITRLVNTVIDGIADDMQSVFEDLLRFVACDMIFYRAQTPKELV----QR 136

Query: 207 QVQKIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDD-YELAAIDAIAA 265
           Q ++ DPLL WVE + G +  +       +Q    I+ V N ++K +  Y LAA+  +  
Sbjct: 137 QCEQWDPLLDWVEEKLGARFHLTEGLIHVEQPREAIQAVSNYLRKVESPYMLAALHVMTT 196

Query: 266 AAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
              S +IA+ +   ++  + A ++  L+ED  +++WG
Sbjct: 197 LTGSALIALAVSAKRIHADYAWDIAHLDEDWMMEQWG 233


>gi|400755739|ref|YP_006564107.1| hypothetical protein PGA2_c28910 [Phaeobacter gallaeciensis 2.10]
 gi|398654892|gb|AFO88862.1| hypothetical protein PGA2_c28910 [Phaeobacter gallaeciensis 2.10]
          Length = 235

 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 103/209 (49%), Gaps = 7/209 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRF++ VS  E +DG  + V LD R +KTP+K  L +P   +A+AI AEWD  QT+ + P
Sbjct: 7   KRFWKAVSVAETEDG--FAVELDGRRVKTPAKAALAVPIREMAEAIAAEWD-AQTESVNP 63

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP+ + A  A+++V      + + L +  + DL+  RA    +L     +RQ +  DP
Sbjct: 64  NTMPVTRSANAAIDKVTHQHAAVADMLAEYGDSDLLCYRAEMPVELV----QRQAEIWDP 119

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
            L W     G +    S      Q    +  +  L+ +   ++LAA   + A + SLV+ 
Sbjct: 120 ALDWAAETLGARLEPRSGILHAPQNPEALAQLRRLVHEMTPFQLAAFHDLVAMSGSLVLG 179

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
               R     ++  E+ RL+E  Q  +WG
Sbjct: 180 FAATRSWRPADQIWEMSRLDELWQEQQWG 208


>gi|443899193|dbj|GAC76524.1| RNA polymerase subunit K [Pseudozyma antarctica T-34]
          Length = 277

 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 61/234 (26%), Positives = 115/234 (49%), Gaps = 8/234 (3%)

Query: 95  RFYEKVS-TREADDGNGWTVMLDYRTLKTPSKRPLKLPTLG--LAKAIGAEWDYQQTDGI 151
           RF++ VS +  + + +G+ V+LD R ++TP  + + +P     LA  +  EW+ +Q   +
Sbjct: 43  RFWKTVSLSPPSSECDGFRVLLDNRAIRTPGGQTIVVPRERELLATCMAQEWN-EQDKVL 101

Query: 152 RPFMMPLMKLACTALERVPLTRPKI-IEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQK 210
           +P  +PL  LA  AL+    +  ++ I+  + ++ ++   C           + E Q Q 
Sbjct: 102 KPHALPLTSLAARALDACSDSSERVGIQADLLRYLENETICFQETQ---PKALVELQEQH 158

Query: 211 IDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSL 270
             PLL  V   +G K   ++   G     G + T    + K D ++LAA +       S 
Sbjct: 159 WQPLLAHVNQTYGVKITPFTGLLGNTHAPGTLDTFATHLAKLDHFDLAAFERSVMLTKSF 218

Query: 271 VIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATV 324
           +I++G+    L +E+A +   +E   Q+++WG VE  HD+D A++R  + S  +
Sbjct: 219 LISLGLVSRHLSVEQAAQAAEVEVQSQINRWGAVEDSHDVDQAEMRRTLGSVAI 272


>gi|83854942|ref|ZP_00948472.1| hypothetical protein NAS141_09441 [Sulfitobacter sp. NAS-14.1]
 gi|83842785|gb|EAP81952.1| hypothetical protein NAS141_09441 [Sulfitobacter sp. NAS-14.1]
          Length = 237

 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 104/211 (49%), Gaps = 9/211 (4%)

Query: 93  GKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDG-I 151
            KRF+++ +  EA+   G+TV LD R +KTP+KR L +PT  +A+ I AEW  Q  DG I
Sbjct: 6   AKRFWKEAAVVEAE--GGYTVELDGRGIKTPAKRALVVPTRAMAQKIAAEW--QAQDGVI 61

Query: 152 RPFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKI 211
            P  MP  K A  A+++V L   ++ + L    + DL+  RA +  +L +    RQ ++ 
Sbjct: 62  NPDTMPATKTANAAIDKVALQHAEVADMLAAYGDCDLLCYRADSPAELVA----RQAEQW 117

Query: 212 DPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLV 271
           DP+L+W     G             Q    +  +        +++LAA   + + + SL+
Sbjct: 118 DPMLEWAREALGVSLQTRVGIMHEPQSPADVARLSARTHALSNFQLAAFHDLVSLSGSLI 177

Query: 272 IAIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           +         + E   E+ RL+E  Q ++WG
Sbjct: 178 LGFAAALDAKEAESIWEISRLDEIWQAEQWG 208


>gi|433775464|ref|YP_007305931.1| chaperone required for the assembly of F1-ATPase [Mesorhizobium
           australicum WSM2073]
 gi|433667479|gb|AGB46555.1| chaperone required for the assembly of F1-ATPase [Mesorhizobium
           australicum WSM2073]
          Length = 263

 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 110/210 (52%), Gaps = 8/210 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY++VS   A+   G+ V LD + ++TP K  L LPT   A  +  E+  +Q + I P
Sbjct: 33  KRFYKEVSVASAE--GGFAVHLDGKPVRTPGKAMLALPTEAAATLVAGEF-AEQGETINP 89

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP+M+L  TA++ V      ++E +++  + DL+  RA    D   G+ ERQ ++ DP
Sbjct: 90  MTMPVMRLVNTAIDGVASDPQAVLEDILRFASSDLLCYRA----DAPQGLVERQNERWDP 145

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTV-ENLMKKTDDYELAAIDAIAAAAHSLVI 272
           ++ W  +  G +  +       +Q    I  +  +L ++ +   LAAI  + +   S ++
Sbjct: 146 VIDWARAALGARFNLAEGIIHVEQPRETIAVLGSHLAQRAEPLRLAAIHVMTSLTGSALL 205

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           A+ +  G+L  EEA     ++ED Q+ +WG
Sbjct: 206 ALAVDFGELDGEEAWAAGHVDEDWQIAQWG 235


>gi|254417906|ref|ZP_05031630.1| ATP12 chaperone protein [Brevundimonas sp. BAL3]
 gi|196184083|gb|EDX79059.1| ATP12 chaperone protein [Brevundimonas sp. BAL3]
          Length = 259

 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 97/214 (45%), Gaps = 9/214 (4%)

Query: 94  KRFYEKVS----TREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTD 149
           +RF+  VS       + +G GW V+LD RT +TP+K PL LPT   A+ +  EW   Q +
Sbjct: 25  RRFWTAVSVGPHAAHSSEGGGWAVLLDGRTPQTPAKAPLVLPTEAAAQLVAEEW-AAQGE 83

Query: 150 GIRPFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQ 209
            + P  MP  +LA TA++R+   R  + E +      D+V   A     L     ERQ +
Sbjct: 84  IVEPSTMPATRLASTAIDRIGQAREPVAEEIAAYAGSDVVCYLAEHPTPLV----ERQRR 139

Query: 210 KIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHS 269
           +  P   W   E G      +      Q    I  V+      DD+ L  +        S
Sbjct: 140 EWGPWRDWAAREMGVALEPVAGIVHRPQSPDAIARVKAHAMAMDDFRLTGLATAVPLLGS 199

Query: 270 LVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGL 303
            V+A+ + +G L    A EL R++E  Q ++WG+
Sbjct: 200 AVLALAVEQGALAGGAAFELSRIDELFQEEQWGV 233


>gi|119383544|ref|YP_914600.1| ATP12 ATPase [Paracoccus denitrificans PD1222]
 gi|119373311|gb|ABL68904.1| ATP12 ATPase [Paracoccus denitrificans PD1222]
          Length = 236

 Score = 95.5 bits (236), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 100/210 (47%), Gaps = 7/210 (3%)

Query: 93  GKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIR 152
            +RF+  V   + +   GW V+LD R L+TP K+PL+LPT  LA AI  EW   Q + I 
Sbjct: 6   ARRFWASVGIHKEE--GGWAVLLDERPLRTPGKQPLRLPTEALALAIAEEWQAVQ-EVID 62

Query: 153 PFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKID 212
           P  MPL + A +A+E+V      +   L      DL+  RA A   L       Q +  D
Sbjct: 63  PNAMPLTRSANSAIEKVAPQFDAVAAMLGDYGGTDLLSYRADAPEALVRA----QAEGWD 118

Query: 213 PLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVI 272
           PL+ W  +E      +        Q+  ++  +   +   D + L A+  +     SL++
Sbjct: 119 PLIDWAATELRAPLRITHGVIPVPQDPVVLLKLRAEVASLDPFGLTALHDLVTLPGSLIL 178

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
            + + RG++    A  L R++E+ Q ++WG
Sbjct: 179 GLAVIRGRIDAPTAHALSRIDEEFQAERWG 208


>gi|329114606|ref|ZP_08243365.1| ATP12 ATPase [Acetobacter pomorum DM001]
 gi|326696086|gb|EGE47768.1| ATP12 ATPase [Acetobacter pomorum DM001]
          Length = 255

 Score = 95.5 bits (236), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/246 (26%), Positives = 121/246 (49%), Gaps = 18/246 (7%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDY--QQTDG- 150
           KRF++  +    +   G+ V LD R+++ P K PL + +  LA A+ AEW    Q  DG 
Sbjct: 19  KRFWKLANVTPEE--QGFVVQLDGRSIRLPRKTPLCVKSRALADALAAEWQAAGQNADGR 76

Query: 151 IRPFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQK 210
             P  +PL  +A + +ER+P  R  ++  L+     DL+  R P +  L     + Q ++
Sbjct: 77  FSPADLPLTGIAGSMIERIPAEREGVLRSLLAYAGSDLLSYREPGEGKLA----QAQRKE 132

Query: 211 IDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSL 270
            +P L+W+  ++G      S      Q +  ++ + + M+K +  ELA +     A  SL
Sbjct: 133 WNPWLEWLRKQYGVTLHTSSGVMPIVQPEESLQKLYDAMEKLNPAELAVLAVSVPALGSL 192

Query: 271 VIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIAD----LRVQISSATVFL 326
           V+ + +  G   ++E +    L+E +Q+  W     G D +I D    ++ +++ A  FL
Sbjct: 193 VLGLALVNGAGSVDELVASATLDERMQMAVW-----GEDTEITDRIAGIQREVADAARFL 247

Query: 327 GLSRRN 332
            L+R++
Sbjct: 248 ELARKS 253


>gi|399991419|ref|YP_006571659.1| hypothetical protein PGA1_c01970 [Phaeobacter gallaeciensis DSM
           17395 = CIP 105210]
 gi|398655974|gb|AFO89940.1| hypothetical protein PGA1_c01970 [Phaeobacter gallaeciensis DSM
           17395 = CIP 105210]
          Length = 235

 Score = 95.5 bits (236), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 103/209 (49%), Gaps = 7/209 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRF++ VS  E +DG  + V LD R +KTP+K  L +P   +A+AI AEWD  QT+ + P
Sbjct: 7   KRFWKAVSVAETEDG--FAVELDGRRVKTPAKAALAVPGREMAEAIAAEWD-AQTESVNP 63

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP+ + A  A+++V      + + L +  + DL+  RA    +L     +RQ +  DP
Sbjct: 64  NTMPVTRSANAAIDKVTHQHAAVADMLAEYGDSDLLCYRAEMPVELV----QRQAEIWDP 119

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
            L W     G +    S      Q    +  +  L+ +   ++LAA   + A + SLV+ 
Sbjct: 120 ALDWAAETLGARLEPRSGILHAPQNPEALAHLRRLVHEMTPFQLAAFHDLVAMSGSLVLG 179

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
               R     ++  E+ RL+E  Q  +WG
Sbjct: 180 FAATRSWRPADQIWEMSRLDELWQEQQWG 208


>gi|423713070|ref|ZP_17687330.1| hypothetical protein ME1_00076 [Bartonella vinsonii subsp.
           arupensis OK-94-513]
 gi|395424696|gb|EJF90876.1| hypothetical protein ME1_00076 [Bartonella vinsonii subsp.
           arupensis OK-94-513]
          Length = 260

 Score = 95.5 bits (236), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 60/217 (27%), Positives = 114/217 (52%), Gaps = 8/217 (3%)

Query: 87  MTGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQ 146
           ++ S + KRFY++V T   +   G++++LD   +KTP+KR   +PT   +  +  E++ Q
Sbjct: 24  LSCSPLPKRFYKEVRTLREE--GGFSILLDGCPVKTPAKRFFIVPTEAFSVLVAEEFESQ 81

Query: 147 QTDGIRPFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHER 206
           +   I P  MP+ +L  T ++ +      + E L++    D++F RA    +L     +R
Sbjct: 82  K-QVIDPAKMPITRLVNTVIDGIADDMQSVFEDLLRFVACDMIFYRAQTPKELV----QR 136

Query: 207 QVQKIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDD-YELAAIDAIAA 265
           Q ++ DPLL WVE + G +  +       +Q    I+ V N ++K +  Y LAA+  +  
Sbjct: 137 QCEQWDPLLDWVEEKLGARFHLTEGLIHVEQPREAIQAVSNYLRKVESPYMLAALHVMTT 196

Query: 266 AAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
              S +IA+ +   ++  + A ++  L+ED  +++WG
Sbjct: 197 LTGSALIALAVSTKRINADYAWDVAHLDEDWIIEQWG 233


>gi|170785112|pdb|2ZD2|A Chain A, D202k Mutant Of P. Denitrificans Atp12p
 gi|170785113|pdb|2ZD2|B Chain B, D202k Mutant Of P. Denitrificans Atp12p
          Length = 234

 Score = 95.5 bits (236), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 100/210 (47%), Gaps = 7/210 (3%)

Query: 93  GKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIR 152
            +RF+  V   + +   GW V+LD R L+TP K+PL+LPT  LA AI  EW   Q + I 
Sbjct: 5   ARRFWASVGIHKEE--GGWAVLLDERPLRTPGKQPLRLPTEALALAIAEEWQAVQ-EVID 61

Query: 153 PFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKID 212
           P  MPL + A +A+E+V      +   L      DL+  RA A   L       Q +  D
Sbjct: 62  PNAMPLTRSANSAIEKVAPQFDAVAAMLGDYGGTDLLSYRADAPEALVRA----QAEGWD 117

Query: 213 PLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVI 272
           PL+ W  +E      +        Q+  ++  +   +   D + L A+  +     SL++
Sbjct: 118 PLIDWAATELRAPLRITHGVIPVPQDPVVLLKLRAEVASLDPFGLTALHDLVTLPGSLIL 177

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
            + + RG++    A  L R++E+ Q ++WG
Sbjct: 178 GLAVIRGRIDAPTAHALSRIKEEFQAERWG 207


>gi|354594041|ref|ZP_09012084.1| hypothetical protein CIN_07800 [Commensalibacter intestini A911]
 gi|353673152|gb|EHD14848.1| hypothetical protein CIN_07800 [Commensalibacter intestini A911]
          Length = 242

 Score = 95.5 bits (236), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 65/247 (26%), Positives = 113/247 (45%), Gaps = 10/247 (4%)

Query: 87  MTGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQ 146
           M G I  +RF++  S R   D  G+ ++LD R +K P K  L + +  LAK I AEW+  
Sbjct: 1   MNGIIKSRRFWD--SVRITHDDQGYQILLDERPVKLPKKTTLYVQSESLAKKIAAEWEKA 58

Query: 147 QTDGIRPF---MMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGV 203
                 PF   ++P+ ++  T +E++   R   I  L+   N DL+         L +  
Sbjct: 59  GEKKGDPFSFDLLPITRIVGTMIEKIAPARETYIHALLPYVNGDLLCYHTDTPKTLAT-- 116

Query: 204 HERQVQKIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAI 263
             RQ ++  PL++W E  F  K  +        Q + +I   ++ +   +D EL      
Sbjct: 117 --RQQEQWMPLVQWTEERFNIKLKIQHGIMPITQTEEVIAFFKDYLSNLNDTELTYFAVT 174

Query: 264 AAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSAT 323
                S+ + I +  G+L +E+A E   L+E +Q + WG  +      +A +++ I  A 
Sbjct: 175 VPLLGSIFLTIALKEGRLSVEQAFEAAHLDEIVQAELWG-QDTEQQEKLAQVKIDIQDAF 233

Query: 324 VFLGLSR 330
            F  +S+
Sbjct: 234 EFYSISQ 240


>gi|319405865|emb|CBI79497.1| conserved hypothetical protein [Bartonella sp. AR 15-3]
          Length = 261

 Score = 95.5 bits (236), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 109/210 (51%), Gaps = 8/210 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFYEKV+    ++   + ++LD R LKTP+KR   +P   LA  +  E+  Q+   I P
Sbjct: 31  KRFYEKVNVIFKEEK--FFILLDGRLLKTPAKRDFFVPVETLATLVAQEFVVQKA-VIDP 87

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP+ +L  T ++ +      I EHL++  + D++F RA    +L     +RQ +K D 
Sbjct: 88  VKMPMTRLVNTVIDGIIDNMQIIFEHLLRFVSCDMIFYRAQTPKELV----KRQSEKWDF 143

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDD-YELAAIDAIAAAAHSLVI 272
           LL W E + G    +       +Q    I+ V N ++K +  Y LAA+ A+     S +I
Sbjct: 144 LLDWAEEKLGTHFNLVEGLMHVEQPPESIQAVSNYLRKIESPYTLAALHAMTTLTGSALI 203

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           A+ +   K+  ++A  +  L+ED  +++WG
Sbjct: 204 ALAVAERKICTDDAWAMAHLDEDWTMEQWG 233


>gi|92117128|ref|YP_576857.1| ATP12 ATPase [Nitrobacter hamburgensis X14]
 gi|91800022|gb|ABE62397.1| ATP12 ATPase [Nitrobacter hamburgensis X14]
          Length = 260

 Score = 95.1 bits (235), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 102/212 (48%), Gaps = 8/212 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY     RE  +G  + V+LD + ++TPS+  L  P   +A +I AEW  QQ D I P
Sbjct: 29  KRFYTSAGVREVPEG--FAVLLDDKPVRTPSRNLLAAPAREIAASIAAEWQAQQ-DVINP 85

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP+ +LA + ++ V      ++  ++K F  DL+F RA   + L +    R+    DP
Sbjct: 86  MTMPMTRLANSVIDGVAGRVDAVVADIVKYFGSDLLFYRAGHPDALVT----REAAHWDP 141

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           +L W     G   ++       +Q D  I      +  +D + + A+  +     S ++A
Sbjct: 142 VLFWAAETLGAHFILTEGVVHVRQPDQAIAVARAAL-PSDPWAVGALHVVTTLTGSALLA 200

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWGLVE 305
           + + R +L  +E      ++ED   ++WG+ E
Sbjct: 201 LALMRERLNADEVWAAAHVDEDWNGEQWGVDE 232


>gi|195352075|ref|XP_002042540.1| GM23405 [Drosophila sechellia]
 gi|194124409|gb|EDW46452.1| GM23405 [Drosophila sechellia]
          Length = 279

 Score = 95.1 bits (235), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 120/252 (47%), Gaps = 38/252 (15%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+K S    D  +G+ V+LD+R LKTP   P  + +  LA A+  E+D Q+ + I  
Sbjct: 38  KRFYKKTSVLSGD--SGYEVVLDHRKLKTPKGTPFIVRSEPLAIAVATEFDAQK-ENIER 94

Query: 154 FMMPLMKLACTALER-VPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKID 212
             M L  L  TA++    L++  ++ +L+     D V  +   + DL     + QV + D
Sbjct: 95  SRMHLSALCFTAIDNPNHLSKLDMVNYLLNFIGTDTVLFQYDDEKDL----QDLQVNEWD 150

Query: 213 PLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVE------------NLMKKTDDYELAAI 260
           P++ W               F  + +  L KT+             N+ K    Y L  +
Sbjct: 151 PVIAW---------------FNQRYDTNLQKTMNITPPQVSERDKMNIAKHFQSYSLETL 195

Query: 261 DAIAAAA---HSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRV 317
                A     S+V+A  +    L +E+A+ L RLEE+ Q+  WG VE  HD++  +L+ 
Sbjct: 196 HGFIFAVDTLKSIVLACAVIEQMLTVEKAVALARLEEEYQLKFWGRVEWAHDLNQQELQA 255

Query: 318 QISSATVFLGLS 329
           ++++A +F+ L+
Sbjct: 256 RLAAAVLFIHLN 267


>gi|254465501|ref|ZP_05078912.1| ATP12 ATPase [Rhodobacterales bacterium Y4I]
 gi|206686409|gb|EDZ46891.1| ATP12 ATPase [Rhodobacterales bacterium Y4I]
          Length = 234

 Score = 95.1 bits (235), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 105/210 (50%), Gaps = 7/210 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRF++ VS   A  G+G+ V LD R +KTP+K  L +PT  +A+AI AEWD  Q + + P
Sbjct: 7   KRFWKAVSV--AQTGDGFAVELDGRRVKTPAKALLAVPTREMAEAIAAEWD-AQAESVDP 63

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP  + A  A+++V     ++   L +  + DL+  RA A  +L S    RQ Q+ DP
Sbjct: 64  SAMPCTRSANAAIDKVTHQHREVAAMLAEYGDSDLLCYRADAPVELMS----RQAQEWDP 119

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
            L W     G +    +      Q+   +  +   +++ + ++LAA   +   + SL++ 
Sbjct: 120 ALDWAAETLGVRLQPRTGVLHQPQDAAALAVLAENVREMNPFQLAAFHDLVGISGSLILG 179

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWGL 303
                     E+   L RL+E  Q ++WG+
Sbjct: 180 FAAAHDWRSAEDIWLLSRLDERWQEEQWGV 209


>gi|118591138|ref|ZP_01548537.1| hypothetical protein SIAM614_15967 [Stappia aggregata IAM 12614]
 gi|118436214|gb|EAV42856.1| hypothetical protein SIAM614_15967 [Stappia aggregata IAM 12614]
          Length = 257

 Score = 95.1 bits (235), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 102/209 (48%), Gaps = 7/209 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+ V+   AD   G+ + LD R +KTP K PL LP+  LAKA+ AEW  Q+ + I P
Sbjct: 30  KRFYKDVTHVPAD--GGFAIHLDGRPVKTPGKAPLLLPSEALAKAVAAEWQAQEKE-INP 86

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MPL +++ +AL+ V +   ++ + + +    D +  RA    D    + + Q +  DP
Sbjct: 87  ASMPLTRISNSALDAVSVRFDEVADDITRFAGNDALCYRA----DTPQSLVDTQNRLWDP 142

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           ++ W     G + V+        Q + L+      +       LAA   I +   S ++A
Sbjct: 143 VVDWAGGLLGGRFVLIEGVMHAAQPEPLLVAYRARLSNLTPMRLAAFHTITSLTGSALLA 202

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           +G+    L  + A     +EED  +++WG
Sbjct: 203 LGLMEDYLDADAAWTAAHVEEDFNIERWG 231


>gi|83941465|ref|ZP_00953927.1| hypothetical protein EE36_04513 [Sulfitobacter sp. EE-36]
 gi|83847285|gb|EAP85160.1| hypothetical protein EE36_04513 [Sulfitobacter sp. EE-36]
          Length = 237

 Score = 94.7 bits (234), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 103/211 (48%), Gaps = 9/211 (4%)

Query: 93  GKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDG-I 151
            KRF+++ +  EA+   G+TV LD R +KTP+KR L +PT  +A+ I AEW  Q  DG I
Sbjct: 6   AKRFWKEAAVVEAE--GGYTVELDGRGIKTPAKRALVVPTRAMAQKIAAEW--QAQDGVI 61

Query: 152 RPFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKI 211
            P  MP  K A  A+++V L   ++ + L    + DL+  RA +  +L +    RQ  + 
Sbjct: 62  NPDTMPATKTANAAIDKVALQHAEVADMLAAYGDCDLLCYRADSPAELVA----RQADQW 117

Query: 212 DPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLV 271
           DP+L+W     G             Q    +  +        +++LAA   + + + SL+
Sbjct: 118 DPMLEWAREALGVSLQTRVGIMHEPQSPADVARLSARTHALSNFQLAAFHDLVSLSGSLI 177

Query: 272 IAIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           +         + E   E+ RL+E  Q ++WG
Sbjct: 178 LGFAAALDAKEAESIWEISRLDEIWQAEQWG 208


>gi|395767189|ref|ZP_10447724.1| hypothetical protein MCS_00657 [Bartonella doshiae NCTC 12862]
 gi|395414502|gb|EJF80944.1| hypothetical protein MCS_00657 [Bartonella doshiae NCTC 12862]
          Length = 300

 Score = 94.7 bits (234), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 59/220 (26%), Positives = 116/220 (52%), Gaps = 8/220 (3%)

Query: 87  MTGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQ 146
           ++  ++ KRFY +V     ++G G++++LD   +KTP+KR   +PT   A  +  E++ Q
Sbjct: 64  LSCQMLAKRFYREVKIF-CEEG-GFSILLDECPVKTPAKRHFLVPTEVFAALVAEEFESQ 121

Query: 147 QTDGIRPFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHER 206
           + + I P  MP+ +L  T ++ +      + E L++    D++F RA    +L     +R
Sbjct: 122 K-EVIDPAKMPMTRLVNTVIDGIVDDMQVVFEDLLRFVACDMIFYRAQTPKELV----QR 176

Query: 207 QVQKIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDD-YELAAIDAIAA 265
           Q +  DPLL W E + G +  +       +Q  G I+ V N +++ +  Y LAA+  +  
Sbjct: 177 QCELWDPLLDWAEEKLGARFYLTEGLMHVEQSRGAIQAVSNYLRRVESPYMLAALHTMTT 236

Query: 266 AAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVE 305
              S +IA+ +   ++  + A ++  L+E+  +++WG+ E
Sbjct: 237 LTGSALIALAVAARRINADHAWDIAHLDENWTMEQWGIDE 276


>gi|407800532|ref|ZP_11147392.1| hypothetical protein OCGS_2465 [Oceaniovalibus guishaninsula
           JLT2003]
 gi|407057451|gb|EKE43427.1| hypothetical protein OCGS_2465 [Oceaniovalibus guishaninsula
           JLT2003]
          Length = 235

 Score = 94.7 bits (234), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 100/210 (47%), Gaps = 7/210 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRF+        +DG+   V LD R L+TP+  PL LP   LA+ +  EWD  QT+ + P
Sbjct: 7   KRFWTAARIVRTEDGHA--VFLDDRPLRTPAGAPLALPADTLARMVAEEWD-AQTERVDP 63

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP  + A +A+++V   R  ++  L++    DL+  RA     L +    RQ    DP
Sbjct: 64  LTMPATRSANSAIDKVTPQRAAVVAALLEYGATDLLCYRADGPPTLVA----RQAAAWDP 119

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           LL W  + FG +           Q+   I  +   ++  D + LA    + +   SLV+A
Sbjct: 120 LLDWAAATFGARLRTTVGVMPVAQDAADIARLSPPVEAMDPFALAGFYDLVSLTGSLVLA 179

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWGL 303
           + +    L  E A +  R++E  Q ++WG+
Sbjct: 180 LAVSARHLDPETAWDASRIDETWQSEQWGV 209


>gi|395765213|ref|ZP_10445829.1| hypothetical protein MCO_01111 [Bartonella sp. DB5-6]
 gi|395413066|gb|EJF79545.1| hypothetical protein MCO_01111 [Bartonella sp. DB5-6]
          Length = 260

 Score = 94.7 bits (234), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 64/232 (27%), Positives = 119/232 (51%), Gaps = 9/232 (3%)

Query: 75  SSSSSVTMPMSFMTGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLG 134
           + ++ V    +F   S++ KRFY++V T   ++G  ++++LD   +KTP++R   +PT  
Sbjct: 13  NKNNPVQKTQNFSCQSLL-KRFYKEVKTLCEEEG--FSILLDGCPVKTPARRHFLVPTEA 69

Query: 135 LAKAIGAEWDYQQTDGIRPFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAP 194
            A  +  E++ Q+   I P  MP+ +L  T ++ +      + E L++    D++F RA 
Sbjct: 70  FATLVAQEFESQK-QVIDPAKMPVTRLVNTVIDGIADDMQVVFEDLLRFVACDMMFYRAQ 128

Query: 195 ADNDLTSGVHERQVQKIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDD 254
              +L     ERQ ++ DPLL W E + G +  V       +Q    I+ V N +++ + 
Sbjct: 129 TPKELV----ERQREQWDPLLDWAEEKLGARFQVTEGLMHVEQSRESIQAVSNYLRQVES 184

Query: 255 -YELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVE 305
            Y LAA+  +     S +IA+ +  G    + A +   L+ED  +++WG+ E
Sbjct: 185 PYTLAALHTMTTLTGSALIALAVTAGNFDADHAWDTAHLDEDWLMEQWGVDE 236


>gi|194878355|ref|XP_001974046.1| GG21292 [Drosophila erecta]
 gi|190657233|gb|EDV54446.1| GG21292 [Drosophila erecta]
          Length = 279

 Score = 94.7 bits (234), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 69/242 (28%), Positives = 120/242 (49%), Gaps = 18/242 (7%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+K S    D  +G+ V+LD+R LKTP      + +  LA A+  E+D Q+ + I  
Sbjct: 38  KRFYKKTSVLSGD--SGYEVVLDHRKLKTPKGAAFVVRSEPLAIAVATEFDAQKQN-IER 94

Query: 154 FMMPLMKLACTALER-VPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKID 212
             M L  L  TA++    L++P ++ +L+     D V  +   + DL     + QV + D
Sbjct: 95  SRMHLSALCFTAIDNPNHLSKPDMVNYLLNFIGTDTVLFQYDDEKDL----QDLQVNEWD 150

Query: 213 PLLKWVESEF--GFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAA--- 267
           P++ W    +    +  +  +     +ED +     N+ K    Y L  +     A    
Sbjct: 151 PVIAWFNQRYDTNLQKTMNITPPQVSEEDKM-----NVAKHFQSYSLETLHGFIFAVDTL 205

Query: 268 HSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLG 327
            S+V+A  +    L +E+A+ L RLEE+ Q+  WG VE  HD+   +L+ ++++A +F+ 
Sbjct: 206 KSIVLACAVIEQMLTVEKAVALARLEEEYQLKFWGRVEWAHDLSQQELQARLAAAVLFVH 265

Query: 328 LS 329
           L+
Sbjct: 266 LN 267


>gi|170747286|ref|YP_001753546.1| ATP12 ATPase [Methylobacterium radiotolerans JCM 2831]
 gi|170653808|gb|ACB22863.1| ATP12 ATPase [Methylobacterium radiotolerans JCM 2831]
          Length = 263

 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 113/235 (48%), Gaps = 9/235 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           +RFY++ +   A+D  G+ + LD R   TP++ PL+LP+  LA+ + AEW  Q T  I P
Sbjct: 34  RRFYDEAAF--AEDQGGYRLTLDGRPANTPARNPLRLPSRILAERVAAEWGAQDT-AIDP 90

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MPL +LA TA++ V     ++   L      DL+  RA     L +     Q +  DP
Sbjct: 91  ARMPLTRLANTAIDGVTPRLAEVAADLCAYAGTDLLAYRAGDPERLVAA----QAEAWDP 146

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTV-ENLMKKTDDYELAAIDAIAAAAHSLVI 272
           +L W    FG + ++        Q    I+ + E +   TD +++A +  +     SL+I
Sbjct: 147 ILAWARDAFGARVILSEGVMHVAQPADTIRALSEAVNAVTDPFQMAGLHTLTTLTGSLLI 206

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLG 327
           A+ + +G+L   EA     ++E  Q   WG  +   +  +   R +  +A  F+G
Sbjct: 207 ALAVLKGRLTPAEAWAAAHVDETYQAAVWGR-DAEAEARLEARRTEFEAAAAFVG 260


>gi|440226752|ref|YP_007333843.1| ATP12 ATPase [Rhizobium tropici CIAT 899]
 gi|440038263|gb|AGB71297.1| ATP12 ATPase [Rhizobium tropici CIAT 899]
          Length = 261

 Score = 94.4 bits (233), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 107/210 (50%), Gaps = 8/210 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+ V T  AD+G G  + LD + +KTP++  L LPT  LA+ + AEW  +Q D I P
Sbjct: 31  KRFYKDV-TISADEG-GHAIALDGKVVKTPARHSLALPTEALARLVAAEW-ARQVDVIDP 87

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP+ +L  TA++ V      + + +++    DL+  RA     L     ERQ ++ +P
Sbjct: 88  ASMPVTRLVNTAIDGVATESQAVFDEIVRFSGSDLLCYRADGPERLV----ERQSERWNP 143

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDD-YELAAIDAIAAAAHSLVI 272
           +++W   + G + ++       +Q    I      +++ D   E+A++  I     S ++
Sbjct: 144 VIEWAARDLGARFILAEGVMHQEQPKEAIAAFAAALREFDTPMEIASLHTITTLTGSAIL 203

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           A+   +G L + E   L  L+ED  ++ WG
Sbjct: 204 ALAFAKGFLPLAEVWALAHLDEDWTIEHWG 233


>gi|408380454|ref|ZP_11178038.1| hypothetical protein QWE_22706 [Agrobacterium albertimagni AOL15]
 gi|407745667|gb|EKF57199.1| hypothetical protein QWE_22706 [Agrobacterium albertimagni AOL15]
          Length = 268

 Score = 94.4 bits (233), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 103/210 (49%), Gaps = 8/210 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFYE V     DDG  +++ LD + +KTPSK  L LP    A  + AEW   Q + I P
Sbjct: 36  KRFYESVGIETRDDG--FSITLDGKPVKTPSKNLLTLPNREAADLVVAEW-AGQGEFIDP 92

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP+ KL  TA++ V  +   + + +++    DL+  RA    +L     +RQ  + DP
Sbjct: 93  ATMPITKLVNTAIDAVSNSLDAVFDEIVRFAGTDLLCYRADGPRELI----DRQSARWDP 148

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQ-EDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVI 272
           LL W+ +  G + ++       +Q ++ +      L +  D ++++ ++ +     S V+
Sbjct: 149 LLAWISTAHGARFILVEGVMHQEQPKEAIAAYARALERYRDPFQISCLNVVTTLTGSAVL 208

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
            +    G   ++E   L  L+ED  ++ WG
Sbjct: 209 TLAFAEGAFDLDEVWSLAHLDEDWTIEHWG 238


>gi|319404392|emb|CBI77995.1| conserved hypothetical protein [Bartonella rochalimae ATCC
           BAA-1498]
          Length = 261

 Score = 94.4 bits (233), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 67/210 (31%), Positives = 106/210 (50%), Gaps = 8/210 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFYEKV      +G  + ++LD + LKTP+KR   LP   LA  +  E+  Q+   I P
Sbjct: 31  KRFYEKVDVT-CKEGK-FFILLDGKLLKTPAKRDFFLPVEMLAGLVAQEFTAQKA-VIDP 87

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP+ +L  T ++ +      I E L++    D++F RA    +L     +RQ +K D 
Sbjct: 88  AKMPITRLVNTVIDGIIDNMQIIFEDLLRFVACDMIFYRAQTPKELV----KRQSEKWDF 143

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDD-YELAAIDAIAAAAHSLVI 272
           LL W E   G    +       +Q    I+ V N ++K +  Y LAA+ A+     S +I
Sbjct: 144 LLDWAEERLGTHFNLVEGLMHVEQPPESIQAVSNYLRKIESPYTLAALHAMTTLTGSALI 203

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           A  +  GK+ I++A  +  L+ED  +++WG
Sbjct: 204 AFAVAEGKICIDDAWAIAHLDEDWTMEQWG 233


>gi|326436671|gb|EGD82241.1| ATP synthase F1 complex assembly factor 2 [Salpingoeca sp. ATCC
           50818]
          Length = 294

 Score = 94.4 bits (233), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 72/260 (27%), Positives = 123/260 (47%), Gaps = 9/260 (3%)

Query: 72  TASSSSSSVTMPMSFMTGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLP 131
           T +  +S+    +S  T S   KRFYEK S    D   G+ V LD R+LKTP +    +P
Sbjct: 38  TRALQTSTQCHNLSKTTTSESIKRFYEKASVVPCD--GGFQVHLDKRSLKTPKRNTFVVP 95

Query: 132 TLGLAKAIGAEWDYQQTDGIRPFMMPLMKLACTALERVP-LTRPKIIEHLMKKFNQDLVF 190
           +  LA  +  EWD Q  D I P  M +  L  TA++    ++    I+++      D V 
Sbjct: 96  SEELAHTVAFEWDVQ-GDVIEPSSMNVTLLCNTAIDNPSGMSHEDRIDNVEPFMRTDTVC 154

Query: 191 CRAPADNDLTSGVHERQVQKIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMK 250
            R     D +  + + Q +  DP+++W    +  +P++ +      Q    +  +   + 
Sbjct: 155 FR----EDTSRALIDMQSEIWDPIVEWFAMRYN-QPLMVTYRLDEVQSPEAVAIMRRELL 209

Query: 251 KTDDYELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDI 310
               +EL A +  A  A S VIA+ +  G +  +EA    RLE D Q  ++G VE  H I
Sbjct: 210 GMTPFELTAYELAADTAKSAVIALALREGAINAQEATAAARLETDFQTSRFGEVEWAHTI 269

Query: 311 DIADLRVQISSATVFLGLSR 330
           +  D + +++++ + + L+R
Sbjct: 270 EKHDTQARLAASAIVMRLAR 289


>gi|346991291|ref|ZP_08859363.1| hypothetical protein RTW15_00220 [Ruegeria sp. TW15]
          Length = 235

 Score = 94.4 bits (233), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 61/215 (28%), Positives = 102/215 (47%), Gaps = 7/215 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRF+   +  E D  NG+TV LD R +KTP+K  L LPT  +A+AI  EWD Q+ + + P
Sbjct: 7   KRFWTSGAVVEID--NGYTVALDGRRVKTPAKAALVLPTHAMAQAIADEWDAQEKE-VDP 63

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP  + A  A++ V     ++ + L    + DL+  RA         +  RQ    DP
Sbjct: 64  TTMPFTRSANAAIDNVQHQHGEVADMLADYGDSDLLCYRATH----PEALQNRQANDWDP 119

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
            L W     G + +         Q+   ++T+ N +   + ++LAA   + + + SL++ 
Sbjct: 120 ALDWAADALGARLISRVGVVHHPQDTETLQTLRNRVHALNAFQLAAFHDLVSLSGSLILG 179

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGH 308
                     +E   + RL+E  Q+++WG  +  H
Sbjct: 180 FAAALDWRAPDEIWHISRLDELWQIEQWGHDDEAH 214


>gi|197104734|ref|YP_002130111.1| ATP synthase F1 complex assembly factor 2 [Phenylobacterium
           zucineum HLK1]
 gi|196478154|gb|ACG77682.1| ATP synthase F1 complex assembly factor 2 [Phenylobacterium
           zucineum HLK1]
          Length = 243

 Score = 94.4 bits (233), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 66/210 (31%), Positives = 102/210 (48%), Gaps = 7/210 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           +RFY+ VS  E  D  G+ V+LD R L+TP  +P + P+  +A+ +  EW   Q + +  
Sbjct: 13  RRFYKDVSVGE--DAAGFAVLLDGRALRTPKGQPFRAPSREIAEQVAEEW-AAQGETLEL 69

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             M   +LA TALE +   R  +   + +    DLV   A     L S    RQV    P
Sbjct: 70  ATMHATRLANTALESISQNREAVAGQVAQYAASDLVCYFAEGPEALVS----RQVAAWGP 125

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           +L+  ++E G   V  +     +Q    ++ V  L  + DD+ L+ +    A   S V+ 
Sbjct: 126 VLERAQAEEGLSFVRAAGIVHREQPSETLEKVRALALELDDFALSGLAFGVALFGSAVLG 185

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWGL 303
           I + RG L  E A EL R++E  Q +KWG+
Sbjct: 186 IAVLRGWLGGEAAFELSRVDEAFQEEKWGV 215


>gi|20151503|gb|AAM11111.1| GM08665p [Drosophila melanogaster]
          Length = 279

 Score = 94.4 bits (233), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 119/252 (47%), Gaps = 38/252 (15%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+K S    D  +G+ V+LD+R LKTP   P  + +  LA A+  E+D Q+ + I  
Sbjct: 38  KRFYKKTSVASGD--SGYEVVLDHRKLKTPKGTPFIVRSEPLAIAVATEFDAQK-ENIER 94

Query: 154 FMMPLMKLACTALER-VPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKID 212
             M L  L  TA++    L++  ++ +L+     D V  +   + DL     + QV + D
Sbjct: 95  SRMHLSALCFTAIDNPNHLSKLDMVNYLLNFIATDTVLFQYDDEKDL----QDLQVNEWD 150

Query: 213 PLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVE------------NLMKKTDDYELAAI 260
           P++ W               F  + +  L KT+             N+ K    Y L  +
Sbjct: 151 PVIAW---------------FNQRYDTNLQKTMNITPPQVSEQDKMNVAKHFQSYSLETL 195

Query: 261 DAIAAAA---HSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRV 317
                A     S+V+A  +    L +E+A+ L RLEE+ Q+  WG VE  HD+   +L+ 
Sbjct: 196 HGFIFAVDTLKSIVLACAVIEQMLTVEKAVALARLEEEYQLKFWGRVEWAHDLSQQELQA 255

Query: 318 QISSATVFLGLS 329
           ++++A +F+ L+
Sbjct: 256 RLAAAVLFVHLN 267


>gi|195580637|ref|XP_002080141.1| GD24313 [Drosophila simulans]
 gi|194192150|gb|EDX05726.1| GD24313 [Drosophila simulans]
          Length = 279

 Score = 94.0 bits (232), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 119/252 (47%), Gaps = 38/252 (15%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+K S    D  +G+ V+LD+R LKTP   P  + +  LA A+  E+D Q+ + I  
Sbjct: 38  KRFYKKTSVLSGD--SGYEVVLDHRKLKTPKGTPFIVRSEPLAIAVATEFDAQK-ENIER 94

Query: 154 FMMPLMKLACTALER-VPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKID 212
             M L  L  TA++    L++  ++ +L+     D V  +   + DL     + QV + D
Sbjct: 95  SRMHLSALCFTAIDNPNHLSKLDMVNYLLNFIGTDTVLFQYDDEKDL----QDLQVNEWD 150

Query: 213 PLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVE------------NLMKKTDDYELAAI 260
           P++ W               F  + +  L KT+             N+ K    Y L  +
Sbjct: 151 PVIAW---------------FNQRYDTNLQKTMNITPPQVSEQDKMNVAKHFQSYSLETL 195

Query: 261 DAIAAAA---HSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRV 317
                A     S+V+A  +    L +E+A+ L RLEE+ Q+  WG VE  HD+   +L+ 
Sbjct: 196 HGFIFAVDTLKSIVLACAVIEQMLTVEKAVALARLEEEYQLKFWGRVEWAHDLSQQELQA 255

Query: 318 QISSATVFLGLS 329
           ++++A +F+ L+
Sbjct: 256 RLAAAVLFIHLN 267


>gi|71006088|ref|XP_757710.1| hypothetical protein UM01563.1 [Ustilago maydis 521]
 gi|46097385|gb|EAK82618.1| hypothetical protein UM01563.1 [Ustilago maydis 521]
          Length = 1376

 Score = 94.0 bits (232), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 62/235 (26%), Positives = 110/235 (46%), Gaps = 10/235 (4%)

Query: 95   RFYEKVSTRE-ADDGNGWTVMLDYRTLKTPSKRPLKLPTLG--LAKAIGAEWDYQQTDGI 151
            RF++ VS +  +   +G+ ++LD R ++TPS   + +P     LA  I  EW  +Q   +
Sbjct: 1142 RFWKTVSLQAPSSRDSGYQILLDGRPIRTPSGSAIVIPANRELLATCIAQEW-CEQGKLL 1200

Query: 152  RPFMMPLMKLACTALERVPLTR--PKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQ 209
            +P  +PL  LA  ALE     +   +I   L++    + V  +      L     E Q  
Sbjct: 1201 KPHTLPLTSLAARALEGCSNGQESSQIQTDLLRYLENETVCFQESRPKSLV----ELQSL 1256

Query: 210  KIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHS 269
              DPLL ++ S +      +    GG+   G +    N +     ++LAA +       S
Sbjct: 1257 HWDPLLSYINSTYNTAIKPFQGLLGGQHPHGTLDIFRNHLAALHPFDLAAFERSVLLTKS 1316

Query: 270  LVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATV 324
             +I++ +  GKL +++A +   +E   Q+++WG VE  HD+D A +R  + S  +
Sbjct: 1317 FLISVALVSGKLSVQQAAQAAEVEVQSQINRWGSVEDSHDVDHAQMRTTLGSVAI 1371


>gi|395786459|ref|ZP_10466186.1| hypothetical protein ME5_01504 [Bartonella tamiae Th239]
 gi|423716648|ref|ZP_17690838.1| hypothetical protein MEG_00378 [Bartonella tamiae Th307]
 gi|395422757|gb|EJF88953.1| hypothetical protein ME5_01504 [Bartonella tamiae Th239]
 gi|395428722|gb|EJF94797.1| hypothetical protein MEG_00378 [Bartonella tamiae Th307]
          Length = 255

 Score = 94.0 bits (232), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 108/210 (51%), Gaps = 8/210 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+  +    D  NG+ V+LD + +KTP ++ L +P   LA  +  E++ Q+ D I P
Sbjct: 27  KRFYDNATVVPTD--NGFAVLLDGKCVKTPGRKELIVPNQDLATHLSVEFNVQE-DFIDP 83

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             M + +L  T ++ V   R  + E +++    DL+F RA +  +L     +RQ +  DP
Sbjct: 84  RKMSITRLVNTVIDGVADNREAVEEDILRFLASDLLFYRATSPKELV----DRQTKLWDP 139

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDD-YELAAIDAIAAAAHSLVI 272
           ++ W E ++G+  V+        Q    I T   L++     + +AA+  I   + S ++
Sbjct: 140 IIDWFERKWGYHFVLSEGVMHVDQPRDAILTYGRLLRDIKSPFIIAALHNITTLSGSALL 199

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           A+ ++   +  +EA +L  LEED  ++ WG
Sbjct: 200 AMALYDKYITSDEAWKLAHLEEDWTIEHWG 229


>gi|24585626|ref|NP_610102.1| lethal (2) k14505, isoform A [Drosophila melanogaster]
 gi|442628754|ref|NP_001260668.1| lethal (2) k14505, isoform B [Drosophila melanogaster]
 gi|7298774|gb|AAF53985.1| lethal (2) k14505, isoform A [Drosophila melanogaster]
 gi|440214037|gb|AGB93203.1| lethal (2) k14505, isoform B [Drosophila melanogaster]
          Length = 279

 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 119/252 (47%), Gaps = 38/252 (15%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+K S    D  +G+ V+LD+R LKTP   P  + +  LA A+  E+D Q+ + I  
Sbjct: 38  KRFYKKTSVLSGD--SGYEVVLDHRKLKTPKGTPFIVRSEPLAIAVATEFDAQK-ENIER 94

Query: 154 FMMPLMKLACTALER-VPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKID 212
             M L  L  TA++    L++  ++ +L+     D V  +   + DL     + QV + D
Sbjct: 95  SRMHLSALCFTAIDNPNHLSKLDMVNYLLNFIATDTVLFQYDDEKDL----QDLQVNEWD 150

Query: 213 PLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVE------------NLMKKTDDYELAAI 260
           P++ W               F  + +  L KT+             N+ K    Y L  +
Sbjct: 151 PVIAW---------------FNQRYDTNLQKTMNITPPQVSEQDKMNVAKHFQSYSLETL 195

Query: 261 DAIAAAA---HSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRV 317
                A     S+V+A  +    L +E+A+ L RLEE+ Q+  WG VE  HD+   +L+ 
Sbjct: 196 HGFIFAVDTLKSIVLACAVIEQMLTVEKAVALARLEEEYQLKFWGRVEWAHDLSQQELQA 255

Query: 318 QISSATVFLGLS 329
           ++++A +F+ L+
Sbjct: 256 RLAAAVLFVHLN 267


>gi|384485163|gb|EIE77343.1| hypothetical protein RO3G_02047 [Rhizopus delemar RA 99-880]
          Length = 241

 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/241 (27%), Positives = 113/241 (46%), Gaps = 16/241 (6%)

Query: 95  RFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLG--LAKAIGAEWDYQQTDGIR 152
           RF+++   +E  D N  TV+LD R L+TPSK  ++ P     LA    AEWD  QT  ++
Sbjct: 3   RFWKQAGIKE--DENKVTVVLDQRNLRTPSKHIVQFPKQQRELALLTAAEWD-AQTKNLK 59

Query: 153 PFMMPLMKLACTA-------LERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHE 205
           P  +PL  +   +       L   P  R  +I+ LM  F+ D V C      +L   +  
Sbjct: 60  PHSLPLTSIIARSFDAFDPVLAEDPTIRDAVIDKLMSYFDTDSV-CY---HEELPEALVR 115

Query: 206 RQVQKIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAA 265
            Q     P+++W E  +  K    ++ F   Q +   + +  ++++ D  ELAA +    
Sbjct: 116 LQDAYWKPIIEWTEKAYDVKINTTNNIFAISQPNETKEKLRTIVEQMDALELAAFEKAVM 175

Query: 266 AAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVF 325
           ++ S +I   + +  + +E A     +E   Q+++WG VE  HD++   +R  + S  V 
Sbjct: 176 SSKSFLIGFALVKNGVSVENAARAAHVEMTHQMERWGEVEDSHDVEREYIRQTLGSVAVA 235

Query: 326 L 326
           L
Sbjct: 236 L 236


>gi|395784155|ref|ZP_10463994.1| hypothetical protein ME3_00650 [Bartonella melophagi K-2C]
 gi|395423910|gb|EJF90098.1| hypothetical protein ME3_00650 [Bartonella melophagi K-2C]
          Length = 260

 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 61/211 (28%), Positives = 111/211 (52%), Gaps = 8/211 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY++VS    +   G++++LD   +KTP++R L +PT  LA  +  E+  Q+ + I P
Sbjct: 31  KRFYQEVSITHEE--GGFSILLDGIPVKTPARRCLLMPTKALAALVAQEFTVQE-ESIDP 87

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP+ +L  T ++ +      I E L++    D++F RA    +L     E+Q ++ D 
Sbjct: 88  GRMPITRLVNTVVDGIADNMQVIFEDLLRFVACDMIFYRAQTPKELV----EQQCEQWDF 143

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDD-YELAAIDAIAAAAHSLVI 272
           LL W E + G +  + +     +Q    I+ V N ++K +  Y LAA+ A+     S +I
Sbjct: 144 LLDWAEEKLGARFNIAAGLMHIEQPWEAIQAVSNYLRKIESPYILAALHAMTTLTGSALI 203

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWGL 303
           A  +   K+ ++ A ++  L+E+    +WG+
Sbjct: 204 AFAVTEKKINLDNAWDIAHLDENWTKKQWGV 234


>gi|219130755|ref|XP_002185523.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217403054|gb|EEC43010.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 390

 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 109/239 (45%), Gaps = 32/239 (13%)

Query: 113 VMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRPFMMPLMKLACTALERVPLT 172
           V LD R L+TP  +PL +P++ LA  I AEW+  QT  I P  MPLM LACTAL++    
Sbjct: 150 VTLDGRVLRTPLGQPLSVPSVTLATMIAAEWN-AQTPYIVPTQMPLMTLACTALDQTSRQ 208

Query: 173 RPKIIEHLMKKFNQD-LVFCRAPADNDLTSGVHERQVQKIDPLLKWVESEFGFKPVVYSS 231
                E  +     D + +   P ++    G+++ Q +   P+ + V+ + G      + 
Sbjct: 209 MRTYQETSLNFVGTDTICYWEDPMED---RGLYQAQERLWGPIHELVKQQTGH---ALAQ 262

Query: 232 FFGGK------------QEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRG 279
             G +                L       + + D ++L  + A AA A S  +A  +   
Sbjct: 263 TLGSEGVLVAKNASKLFHPPALYDYAREFVAQLDAWQLTTLHACAAEAKSFWLAWSLLMH 322

Query: 280 K------------LQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFL 326
           +            + +E AI+  R+EE+ Q+  WGLVEGGHD D  +  +QI SA   L
Sbjct: 323 QQQTQQQQQSSLMVDLEGAIQAARVEEEYQIANWGLVEGGHDYDRLNSSIQIRSARAML 381


>gi|167645668|ref|YP_001683331.1| ATP12 ATPase [Caulobacter sp. K31]
 gi|167348098|gb|ABZ70833.1| ATP12 ATPase [Caulobacter sp. K31]
          Length = 250

 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 102/209 (48%), Gaps = 7/209 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           +RFY+  +    D   G+ V+LD RT K+P+K PL LP+  LA  +  EW+ Q    I  
Sbjct: 12  RRFYKAATVGPMD--GGFAVLLDGRTPKSPAKAPLVLPSQALADLVAGEWEAQD-QVIDS 68

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
            +MP  +LA TA++R+  TR ++   +      DL+   A    D  + + ERQ +    
Sbjct: 69  TVMPATRLAFTAIDRIRETRAEVAAEVAAYAGSDLLCYWA----DHPTPLVERQKRDWGG 124

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           +L W  +E        S      Q    + +VE L    DD+ LA +   A    S V+A
Sbjct: 125 MLDWARAELDLHLQPVSGVIHTAQSPAALASVEALALTMDDFTLAGVAYGAGLLGSTVLA 184

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           + +  GK+   +A++L RLEE  Q + WG
Sbjct: 185 LALRAGKVTGRKALDLSRLEEVFQAETWG 213


>gi|260432479|ref|ZP_05786450.1| ATP12 ATPase [Silicibacter lacuscaerulensis ITI-1157]
 gi|260416307|gb|EEX09566.1| ATP12 ATPase [Silicibacter lacuscaerulensis ITI-1157]
          Length = 235

 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 104/209 (49%), Gaps = 7/209 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRF+ + +    DDG  +TV LD R +KTP+K  L +PT  +A+A+G EWD Q+ + + P
Sbjct: 7   KRFWTESAVVAVDDG--YTVELDGRRVKTPAKAALVVPTRAMAEAVGREWDAQEKE-VDP 63

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP  + A  A+++V     ++ + L    + +L+  RA    +L +    RQ ++ DP
Sbjct: 64  ATMPFTRSANAAIDKVRHQHAEVADMLADYGDSELLCYRATYPQELAA----RQSEQWDP 119

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
            L W     G +  V +      Q    +  + +++   D + LAA   + + + SL++ 
Sbjct: 120 ALDWAAETLGARLQVVAGVVHQPQPVDAVNRLRDMVHALDPFRLAAFHDLVSLSGSLILG 179

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
               R     EE   + +L+E  Q ++WG
Sbjct: 180 FAAARNWRTAEEIWSISQLDEIWQAEQWG 208


>gi|339018075|ref|ZP_08644218.1| ATP synthase F1 mitochondrial assembly chaperone ATP12 [Acetobacter
           tropicalis NBRC 101654]
 gi|338752852|dbj|GAA07522.1| ATP synthase F1 mitochondrial assembly chaperone ATP12 [Acetobacter
           tropicalis NBRC 101654]
          Length = 249

 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/246 (28%), Positives = 113/246 (45%), Gaps = 18/246 (7%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDY--QQTDGI 151
           KRF+++ S     DG G+ V LD R ++ P + PL++ +  LA A+  EW    ++  G+
Sbjct: 15  KRFWKQASV--VPDGAGYAVQLDGRPVRLPERTPLRVESRALADALAEEWQAAGKEAGGL 72

Query: 152 -RPFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQK 210
            RP  +PL  +  + LER+P  R  ++E L+     DL+  RA   +DL       Q ++
Sbjct: 73  FRPEDLPLTGIVGSMLERIPAQREGVVESLLAYAGSDLLCYRAENWSDLA----RLQKEQ 128

Query: 211 IDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSL 270
             P L W    F     V        Q       +  ++++    +LAA+     A  SL
Sbjct: 129 WTPWLDWCCKRFDAPLEVSEGIMPIAQPAETFNALRRVLEQATPAQLAALSVAVPALGSL 188

Query: 271 VIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIAD----LRVQISSATVFL 326
           V+ + +   +   E  +    L+E  Q+ +W     G D +I D    L  ++S A  FL
Sbjct: 189 VLGLALVEQQADPETLVACATLDERAQMQRW-----GEDTEITDRIAALVREVSDAARFL 243

Query: 327 GLSRRN 332
            LSR+N
Sbjct: 244 ALSRQN 249


>gi|195475920|ref|XP_002090231.1| GE12909 [Drosophila yakuba]
 gi|194176332|gb|EDW89943.1| GE12909 [Drosophila yakuba]
          Length = 279

 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/252 (27%), Positives = 119/252 (47%), Gaps = 38/252 (15%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+K S    D  +G+ V+LD+R LKTP   P  + +  LA A+  E+D Q+ + I  
Sbjct: 38  KRFYKKTSVLSGD--SGYEVVLDHRKLKTPKGAPFVVRSEPLAIAVATEFDAQKQN-IER 94

Query: 154 FMMPLMKLACTALER-VPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKID 212
             M L  L  TA++    L++  ++ +L+     D V  +   + DL     + Q+ + D
Sbjct: 95  SRMHLSALCFTAIDNPNHLSKLDMVNYLLNFIGTDTVLFQYDDEKDL----QDLQINEWD 150

Query: 213 PLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVE------------NLMKKTDDYELAAI 260
           P++ W               F  + +  L KT+             N+ K    Y L  +
Sbjct: 151 PVIAW---------------FNQRYDTNLQKTMNITPPQVSEQDKMNVAKHLSSYSLETL 195

Query: 261 DAIAAAA---HSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRV 317
                A     S+V+A  +    L +E+A+ L RLEE+ Q+  WG VE  HD+   +L+ 
Sbjct: 196 HGFIFAVDTLKSIVLACAVIEQMLTVEKAVALARLEEEYQLKFWGRVEWAHDLSQQELQA 255

Query: 318 QISSATVFLGLS 329
           ++++A +F+ L+
Sbjct: 256 RLAAAVLFVHLN 267


>gi|338739361|ref|YP_004676323.1| domain ATP12 chaperone protein [Hyphomicrobium sp. MC1]
 gi|337759924|emb|CCB65755.1| conserved protein of unknown function; putative domain ATP12
           chaperone protein [Hyphomicrobium sp. MC1]
          Length = 267

 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 97/209 (46%), Gaps = 8/209 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           +RFY++VS     D   ++V+LD R +KTP KR L LPT  LA+AI  EW   Q + I P
Sbjct: 37  RRFYKEVSV---GDTAPFSVLLDGRPIKTPKKRALALPTHELAEAIAEEW-RAQGEHINP 92

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MPL + A TA++ V  T   + + +      DL+  RA     L     E Q +  DP
Sbjct: 93  AHMPLTRFANTAIDAVADTLDAVADDIAAYAGTDLICYRAETPEKLV----ELQAEHWDP 148

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           ++ WV      +  V        Q    I   E  ++  D   L+ +  I     S +IA
Sbjct: 149 IVAWVNETLNAEFRVVFGIVHVAQPTAAIVAYEQALEPHDAMRLSGLHVITTLTGSALIA 208

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           + I R  L  + A +   ++ED Q+  WG
Sbjct: 209 LAIDREWLSPDAAWKAAHVDEDYQISLWG 237


>gi|66801281|ref|XP_629566.1| ATP synthase mitochondrial F1 complex assembly factor 2
           [Dictyostelium discoideum AX4]
 gi|60462945|gb|EAL61142.1| ATP synthase mitochondrial F1 complex assembly factor 2
           [Dictyostelium discoideum AX4]
          Length = 330

 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/225 (24%), Positives = 109/225 (48%), Gaps = 5/225 (2%)

Query: 102 TREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRPFMMPLMKL 161
           T   +   G+  ++D R ++TPS   +  P+  +A A+ AEW  Q+   I+P  +P+ + 
Sbjct: 101 TEPENPDQGYYPLIDERKIRTPSNHVIITPSKEIAYAVAAEWRAQE-KYIKPSRLPITQT 159

Query: 162 ACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDPLLKWVESE 221
             + L+  P  R KII   +     D +  R   D    S + + Q +  +P+L++    
Sbjct: 160 IISCLDVRPEGRFKIIGEFINHLATDPICNREKND----SKLKKLQSELYEPILQFANEY 215

Query: 222 FGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGKL 281
           +G    + +     K    L+  +E  +   +++EL  +  I+ ++ S ++A+ ++ GKL
Sbjct: 216 YGIPFSISTHLSISKHPKELLDKIERHLHSMNNWELVCLQLISQSSKSFLVALSLYYGKL 275

Query: 282 QIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFL 326
           +++   + I LEE+ Q + WG +  GHD+   +   +I+     L
Sbjct: 276 RLDNLYQTIALEEEYQSETWGRIPFGHDLAECETHNEIAPPLFML 320


>gi|258542795|ref|YP_003188228.1| ATP synthase F1 mitochondrial assembly chaperone ATP12 [Acetobacter
           pasteurianus IFO 3283-01]
 gi|384042716|ref|YP_005481460.1| ATP synthase F1 mitochondrial assembly chaperone ATP12 [Acetobacter
           pasteurianus IFO 3283-12]
 gi|384051233|ref|YP_005478296.1| ATP synthase F1 mitochondrial assembly chaperone ATP12 [Acetobacter
           pasteurianus IFO 3283-03]
 gi|384054341|ref|YP_005487435.1| ATP synthase F1 mitochondrial assembly chaperone ATP12 [Acetobacter
           pasteurianus IFO 3283-07]
 gi|384057575|ref|YP_005490242.1| ATP synthase F1 mitochondrial assembly chaperone ATP12 [Acetobacter
           pasteurianus IFO 3283-22]
 gi|384060216|ref|YP_005499344.1| ATP synthase F1 mitochondrial assembly chaperone ATP12 [Acetobacter
           pasteurianus IFO 3283-26]
 gi|384063508|ref|YP_005484150.1| ATP synthase F1 mitochondrial assembly chaperone ATP12 [Acetobacter
           pasteurianus IFO 3283-32]
 gi|384119518|ref|YP_005502142.1| ATP synthase F1 mitochondrial assembly chaperone ATP12 [Acetobacter
           pasteurianus IFO 3283-01-42C]
 gi|256633873|dbj|BAH99848.1| ATP synthase F1 mitochondrial assembly chaperone ATP12 [Acetobacter
           pasteurianus IFO 3283-01]
 gi|256636932|dbj|BAI02901.1| ATP synthase F1 mitochondrial assembly chaperone ATP12 [Acetobacter
           pasteurianus IFO 3283-03]
 gi|256639985|dbj|BAI05947.1| ATP synthase F1 mitochondrial assembly chaperone ATP12 [Acetobacter
           pasteurianus IFO 3283-07]
 gi|256643041|dbj|BAI08996.1| ATP synthase F1 mitochondrial assembly chaperone ATP12 [Acetobacter
           pasteurianus IFO 3283-22]
 gi|256646096|dbj|BAI12044.1| ATP synthase F1 mitochondrial assembly chaperone ATP12 [Acetobacter
           pasteurianus IFO 3283-26]
 gi|256649149|dbj|BAI15090.1| ATP synthase F1 mitochondrial assembly chaperone ATP12 [Acetobacter
           pasteurianus IFO 3283-32]
 gi|256652136|dbj|BAI18070.1| ATP synthase F1 mitochondrial assembly chaperone ATP12 [Acetobacter
           pasteurianus IFO 3283-01-42C]
 gi|256655193|dbj|BAI21120.1| ATP synthase F1 mitochondrial assembly chaperone ATP12 [Acetobacter
           pasteurianus IFO 3283-12]
          Length = 255

 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 119/245 (48%), Gaps = 18/245 (7%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDY--QQTDG- 150
           KRF+++       +G G+ V LD R+++ P K PL + +  LA A+ AEW    Q  DG 
Sbjct: 19  KRFWKQADV--VPEGQGFVVQLDGRSIRLPRKTPLCVTSRALADALAAEWQAAGQNADGR 76

Query: 151 IRPFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQK 210
             P  +PL  +A + +ER+P  R  ++  L+     DL+  R   +  L     + Q ++
Sbjct: 77  FSPADLPLTGIAGSMIERIPAEREGVLRSLLAYAGSDLLCYREQGEGKLA----QAQRKE 132

Query: 211 IDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSL 270
            DP L+W+  ++G             Q +  ++ + + M+K +  ELA +     A  SL
Sbjct: 133 WDPWLEWLRKQYGAILHTSCGVMPIVQPEESLQKLYDAMEKLNPAELAVLAVSVPALGSL 192

Query: 271 VIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIAD----LRVQISSATVFL 326
           V+ + +  G   +++ +    L+E +Q+  W     G D +I D    ++ +++ A  FL
Sbjct: 193 VLGLALVNGAGSVDDLVASATLDECMQMAVW-----GEDTEITDRIAGIQREVADAARFL 247

Query: 327 GLSRR 331
            L+R+
Sbjct: 248 ELARK 252


>gi|402848983|ref|ZP_10897228.1| hypothetical protein A33M_2096 [Rhodovulum sp. PH10]
 gi|402500738|gb|EJW12405.1| hypothetical protein A33M_2096 [Rhodovulum sp. PH10]
          Length = 260

 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 8/209 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY  VS RE     G+ + LD R ++TP++  L LP   LA+ + AEW   Q + I P
Sbjct: 30  KRFYTDVSVRET--AAGFAIELDSRPVRTPARETLALPNGALAETVAAEW-RAQGETIDP 86

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MPL +LA   ++ V     +I E + +    DL+  RA     L +    RQ  + DP
Sbjct: 87  AKMPLTRLANVVIDAVGAAADEIAEDVARYLGSDLLVYRADGPERLVA----RQHAQWDP 142

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           +L W     G + ++        Q D  I  +  L+ K + + LAA+  I     S ++A
Sbjct: 143 VLDWARDAHGARFILAEGVVFASQPDTAIAAIRALIPK-NPWRLAAVHVITTLTGSALLA 201

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           + +  G + ++ A     L+ED  ++ WG
Sbjct: 202 LALAEGAIGLDAAWSAAHLDEDWNMELWG 230


>gi|374576193|ref|ZP_09649289.1| chaperone required for the assembly of F1-ATPase [Bradyrhizobium
           sp. WSM471]
 gi|374424514|gb|EHR04047.1| chaperone required for the assembly of F1-ATPase [Bradyrhizobium
           sp. WSM471]
          Length = 264

 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/223 (27%), Positives = 105/223 (47%), Gaps = 8/223 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY++V   EA+DG  + + LD + ++TPS R + +P+  LA A+ AEW   Q + I+P
Sbjct: 30  KRFYKEVGVAEAEDG--FAITLDGKAIRTPSGRQVVIPSRALADAVAAEW-ADQNETIKP 86

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MPL ++A + +E V      + + L K    DL+F RA     L +    R+    DP
Sbjct: 87  MTMPLTRIANSVVEGVVDRVDLVTDDLAKYLQSDLLFYRAGHPEGLVA----REAAHWDP 142

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           +L W     G   ++        Q +  ++     +   D + +AA+  I     S ++A
Sbjct: 143 VLFWAAETLGAHFILSEGVMHVTQPEEAVQAARAALPG-DAWSIAALHVITTLTGSALLA 201

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLR 316
           + +  G     +      ++ED   +KWG+ E    +  A LR
Sbjct: 202 MALAHGVRDANQVWAAAYVDEDWNAEKWGVDEEAAGLRAARLR 244


>gi|328868042|gb|EGG16422.1| ATP synthase mitochondrial F1 complex assembly factor 2
           [Dictyostelium fasciculatum]
          Length = 395

 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/234 (26%), Positives = 113/234 (48%), Gaps = 6/234 (2%)

Query: 95  RFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRPF 154
           ++Y+ V      +  G+   LD R +KTP      LPT  LA A+ AEW + QT  I+P 
Sbjct: 146 KWYKHVGYTYDQEKGGYVPTLDNRAMKTPCGNHFVLPTKELAMAVAAEW-HTQTTYIKPS 204

Query: 155 MMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDPL 214
            +PL     T ++  P  R K I  ++     D V C   AD   +S + + Q +K+DP+
Sbjct: 205 RLPLSSALATCVDLTPEQRLKSITEIVGHLKTDPV-CNREADE--SSKMRKLQDEKLDPV 261

Query: 215 LKWVESEFGFKPVVYSSFFGG--KQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVI 272
            ++  + +G       S+     K     +K +++ +    ++ L A+  I +++ S + 
Sbjct: 262 FEFANAYYGGGKNFKMSYGLNLSKHLPATLKRIQDHLGSLSNFHLLALQFITSSSKSFLC 321

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFL 326
           A+ I+   ++++   + + +EE+ Q D WG +  GHD+   +   +I+ A   L
Sbjct: 322 ALAIYHQHVRLDGIYDTVAIEEEYQADIWGKIPFGHDLAEMETLNEIAPALFIL 375


>gi|330804137|ref|XP_003290055.1| hypothetical protein DICPUDRAFT_154531 [Dictyostelium purpureum]
 gi|325079855|gb|EGC33436.1| hypothetical protein DICPUDRAFT_154531 [Dictyostelium purpureum]
          Length = 318

 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 55/216 (25%), Positives = 108/216 (50%), Gaps = 5/216 (2%)

Query: 95  RFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRPF 154
           R+Y+       ++  G+   +D R +KTP+   + +P+  +A +I AEW  Q+   IRP 
Sbjct: 81  RWYKTTGYTYDEELGGYLPTIDDRRIKTPNDILVVVPSKEIALSIAAEWAAQE-KYIRPA 139

Query: 155 MMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDPL 214
            +P+ +   T LE  P  R K+I   +     D    R   D    S + + Q +  DP+
Sbjct: 140 RLPITQTIITCLEIRPEGREKVIGEFLNHLATDPTCNREMYD----SKLQKLQKEFFDPV 195

Query: 215 LKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAI 274
           + +    +G +  +       K    L+ ++++ +   +++EL  +  I+ +A S ++A+
Sbjct: 196 VNFASEYYGKEFTISKHLETSKHPQELLTSIKDHLNSMNNFELCCLQLISQSAKSYLLAL 255

Query: 275 GIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDI 310
            ++ GK++++   + I LEE+ Q + WG V  GHD+
Sbjct: 256 NLYYGKIRLDNLYKSIALEEEYQAEVWGKVPFGHDL 291


>gi|218677541|ref|ZP_03525438.1| ATP12 ATPase [Rhizobium etli CIAT 894]
          Length = 223

 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 104/218 (47%), Gaps = 6/218 (2%)

Query: 113 VMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRPFMMPLMKLACTALERVPLT 172
           V LD +T++TP ++ L +PT  LA+ + AEW  Q  + I P  MP+ +L  TAL+ V   
Sbjct: 10  VTLDGKTVRTPVRQVLAVPTEALARLVAAEWQAQGEE-INPMTMPVTRLVNTALDGVTAN 68

Query: 173 RPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDPLLKWVESEFGFKPVVYSSF 232
           +  I E +++  + DL+  RA     L     ERQ ++ DP++ W  ++ G + ++    
Sbjct: 69  KQAIFEDILRFSSSDLICYRADGPELLV----ERQTERWDPVIDWAANDLGARFILIEGV 124

Query: 233 FGGKQEDGLIKTVENLMKKTDD-YELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIR 291
              +Q           + + D    LAA+  +     S ++A+    G++ +EEA  L  
Sbjct: 125 MPQEQPREATAAFAVTLARFDSPMALAALHTVTTLTGSAILALAFACGRVTMEEAWSLAH 184

Query: 292 LEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGLS 329
           L+ED  ++ WG  E   +          ++  VF  LS
Sbjct: 185 LDEDWTIEHWGNDEEAEERRAKRFAEFTAATDVFFALS 222


>gi|384921228|ref|ZP_10021216.1| ATP12 ATPase [Citreicella sp. 357]
 gi|384464862|gb|EIE49419.1| ATP12 ATPase [Citreicella sp. 357]
          Length = 237

 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 101/212 (47%), Gaps = 7/212 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           +RFYE+ +  E   G G  + LD   + TP K  L +P+  LA+AI AEW   Q + I P
Sbjct: 7   RRFYEQATPTETSSGYG--IALDGHRVMTPGKSALVVPSRALAEAIAAEWQ-AQGEKIDP 63

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP  + A +A+E+V   +  + + L    + DL+  RA   + L      RQ    DP
Sbjct: 64  GSMPFTRTANSAIEKVAPQKDAVAQMLADYGDSDLLCYRAAEPDALV----RRQADLWDP 119

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           +L W  +  G + V  +      Q+   +K + + + +  ++ELAA   + A + SL++ 
Sbjct: 120 MLDWAAASLGARLVPVTGIMHAPQDAMALKNLADRVHRMTEFELAAFHDLVAVSGSLILG 179

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWGLVE 305
                     ++   L RL+E  Q + WG+ E
Sbjct: 180 FAATGPDHDPDDLWSLSRLDECWQEETWGVDE 211


>gi|319408732|emb|CBI82389.1| ATP12 chaperone family protein [Bartonella schoenbuchensis R1]
          Length = 260

 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 112/211 (53%), Gaps = 8/211 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY++VS   A +  G++++LD   +KTP++R L + T  LA  +  E+  Q+ + I P
Sbjct: 31  KRFYKEVSI--AHEEGGFSILLDGTPVKTPARRCLLMSTEALAALVAQEFTVQE-ESIDP 87

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP+ +L  T ++ +      I E L++    D++F RA    +L     E+Q ++ D 
Sbjct: 88  GKMPITRLVNTVVDGIADNMQIIFEDLLRFVACDMIFYRAQTPKELV----EQQCEQWDF 143

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDD-YELAAIDAIAAAAHSLVI 272
           LL WVE + G +  + +     +Q    I+ V N ++K +  Y LAA+ A+     S +I
Sbjct: 144 LLDWVEEKLGARFNIAAGVMHIEQPWEAIQAVSNYLRKIESPYILAALHAMTTLTGSALI 203

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWGL 303
           A  +   K+ ++ A ++  L+E+    +WG+
Sbjct: 204 AFAVAEKKINLDNAWDIAHLDENWTKKQWGV 234


>gi|114704675|ref|ZP_01437583.1| hypothetical protein FP2506_07061 [Fulvimarina pelagi HTCC2506]
 gi|114539460|gb|EAU42580.1| hypothetical protein FP2506_07061 [Fulvimarina pelagi HTCC2506]
          Length = 251

 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 115/235 (48%), Gaps = 9/235 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFYE+ +   A+   G+ V+LD R +KTP+K+ L LP   ++ AI  EW   Q + I P
Sbjct: 24  KRFYEEAALGSAE--TGYQVLLDGRPVKTPAKKALVLPNDEISNAIRDEW-AAQGERIDP 80

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP  +LA T ++ V L    ++  + +    DL+F RA   + L     ERQ ++ DP
Sbjct: 81  GTMPATRLANTVVDAVALDPKPVLAEVPRYAETDLLFYRAGHPDSLV----ERQRERWDP 136

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDD-YELAAIDAIAAAAHSLVI 272
           ++ W       + V+       +Q    +K     +    D + +A +    + + S +I
Sbjct: 137 IVVWASELLEVRFVLTEGVMHVEQSAESLKAFAKRVSPIHDPWVIAGLQQATSISGSGLI 196

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLG 327
           A+ +F  +L ++EA  L RL+ED   ++WG  E    +     +    +A +F+G
Sbjct: 197 ALALFERRLGVDEAWALSRLDEDWNAERWGEDEEAQLVS-RRRKADFETAALFMG 250


>gi|451940781|ref|YP_007461419.1| hypothetical protein BAnh1_07520 [Bartonella australis Aust/NH1]
 gi|451900168|gb|AGF74631.1| hypothetical protein BAnh1_07520 [Bartonella australis Aust/NH1]
          Length = 260

 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 114/213 (53%), Gaps = 8/213 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+KV  R  + GN + ++LD   +KTP++R L +P   LA  +  E+D Q+ + I P
Sbjct: 31  KRFYKKVDAR-YERGN-YFILLDGSPVKTPARRCLFVPKETLAALVVQEFDIQE-EVIDP 87

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP+ +L  T ++ V      I E L++    D++  RA    +L     +RQ ++ D 
Sbjct: 88  VKMPITRLVNTVIDGVADDMQAIFEDLLRFVACDMILYRAQTPKELV----KRQCEQWDF 143

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDD-YELAAIDAIAAAAHSLVI 272
           LL W+E + G +  +       +Q   +++ V N +++ +  Y LAA+  I     S +I
Sbjct: 144 LLDWIEEKLGARFNLAEGLMYIEQPREVLQAVSNYLRRIESPYILAALHTITTLTGSALI 203

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVE 305
           A+ +   K+ +++A  +  L+ED  +++WG+ E
Sbjct: 204 ALAVAERKISLDKAWAIAHLDEDWTMEQWGIDE 236


>gi|403530660|ref|YP_006665189.1| hypothetical protein RM11_0753 [Bartonella quintana RM-11]
 gi|403232731|gb|AFR26474.1| hypothetical protein RM11_0753 [Bartonella quintana RM-11]
          Length = 261

 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 110/210 (52%), Gaps = 8/210 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY++V     ++G G++V LD  ++KTP+KR   +PT   A  +  E+  Q+ + I P
Sbjct: 32  KRFYKEVKI-SCEEG-GFSVFLDGCSVKTPAKRHFLVPTEVFAAFVAQEFKSQK-EVIDP 88

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP+ +L  T ++ +      + E L++    D++F RA    +L     +RQ ++ DP
Sbjct: 89  TKMPMTRLVNTVIDGIADDMQVVFEDLLRFVACDMIFYRAQTPKELV----QRQCEQWDP 144

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDD-YELAAIDAIAAAAHSLVI 272
           LL W E + G +  +       +Q    I+ V N ++K +  Y LAA+  +     S +I
Sbjct: 145 LLDWAEEKLGSRFHLAEGLMHIEQPWEAIQAVSNYLRKVESPYMLAALHTMTTLTGSALI 204

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           A+ +  GK+  + A  +  L+E+  +++WG
Sbjct: 205 ALAVAGGKVDSDHAWNIAHLDENWMMEQWG 234


>gi|349699575|ref|ZP_08901204.1| ATP synthase F1 mitochondrial assembly chaperone [Gluconacetobacter
           europaeus LMG 18494]
          Length = 257

 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 67/242 (27%), Positives = 117/242 (48%), Gaps = 16/242 (6%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDY---QQTDG 150
           KRF+ + + R A+   G++V LD R ++ P   PL + +  LA AI  EW +   ++   
Sbjct: 23  KRFWVQAAARPAE--GGFSVALDGRGIRLPGGTPLCVASRALAGAIADEWAHAGGEKGGD 80

Query: 151 IRPFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQK 210
             P  +PL ++A T +ERV       +  L++  + +L+  RA    D  + + ERQ  +
Sbjct: 81  FTPDDLPLTRIAGTMIERVAPDPAAQVTALLQYVDGELLCYRA----DHPALLCERQKAE 136

Query: 211 IDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSL 270
            DP L W+ +  G    V        Q   +      +++K D+  LAA+  +  A  S+
Sbjct: 137 WDPQLAWLHARHGIDMAVTQGIMPLSQSPAVQAAWRGILEKMDNPTLAALGVMVPAMKSI 196

Query: 271 VIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLR---VQISSATVFLG 327
           V+ + +  G L   +A E+  ++E  Q+D W    GG D  +  LR   ++++ A+ FL 
Sbjct: 197 VLGLAVVTGALPPAKAAEVASVDERTQMDIW----GGDDKQVESLRLLALEVTDASRFLR 252

Query: 328 LS 329
           L 
Sbjct: 253 LC 254


>gi|240850771|ref|YP_002972171.1| hypothetical protein Bgr_12440 [Bartonella grahamii as4aup]
 gi|240267894|gb|ACS51482.1| hypothetical protein Bgr_12440 [Bartonella grahamii as4aup]
          Length = 262

 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 55/213 (25%), Positives = 110/213 (51%), Gaps = 8/213 (3%)

Query: 92  VGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGI 151
           + KRFY++V    A +   +T++LD R +KTP++R   +PT   A+ +  E++ Q+   +
Sbjct: 31  LAKRFYKQVKI--ACEEGRFTILLDERPVKTPARRHFHVPTEVFAEYVAQEFESQK-HVV 87

Query: 152 RPFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKI 211
            P  MP+ +L  T ++ +      + E L++    D++F RA    +L     ++Q ++ 
Sbjct: 88  DPAKMPMTRLVNTVIDGIADDMQVVFEDLLRFVACDMIFYRAQTSKELV----QKQSEQW 143

Query: 212 DPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDD-YELAAIDAIAAAAHSL 270
           DPLL W E + G +  +       +Q    ++ V + ++  +  Y LAA+  +     S 
Sbjct: 144 DPLLDWAEKKLGSRFYLTEGLMHVEQSPEALQAVSHYLRSVESPYMLAALHMMTTLTGSA 203

Query: 271 VIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGL 303
           +IA+ +  G +  + A  +  L+ED  +++WG+
Sbjct: 204 LIALAVAAGSIDADHAWSIAHLDEDWMMEQWGI 236


>gi|86749457|ref|YP_485953.1| ATP12 ATPase [Rhodopseudomonas palustris HaA2]
 gi|86572485|gb|ABD07042.1| ATP12 ATPase [Rhodopseudomonas palustris HaA2]
          Length = 265

 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 103/210 (49%), Gaps = 8/210 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY   +  E  DG  + + LD R +KTP++  L  P+  LA+AI AEW  QQ + I P
Sbjct: 30  KRFYTTAAISETPDG--FAITLDGRPIKTPTRNALAAPSRDLAEAIAAEWQAQQ-ELIDP 86

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MPL +LA + ++ V     ++ + + K F  DL+F RA    +L +    R+ Q  DP
Sbjct: 87  ITMPLTRLANSVIDGVAGRIDEVTDDIAKYFGSDLLFYRAGHPEELIA----REAQHWDP 142

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           +L W   EFG   ++        Q +  I      + +   + + A+  +     S ++A
Sbjct: 143 VLFWAAEEFGAHFILAEGIIHVDQPETAIAAARAALPR-HPWSVGALHVVTTITGSALLA 201

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWGL 303
           + +  G+L  E+      ++ED  + +WGL
Sbjct: 202 LALAHGRLDPEQVWAAAHVDEDWNIARWGL 231


>gi|384261686|ref|YP_005416872.1| ATP12 ATPase [Rhodospirillum photometricum DSM 122]
 gi|378402786|emb|CCG07902.1| ATP12 ATPase [Rhodospirillum photometricum DSM 122]
          Length = 293

 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 74/209 (35%), Positives = 113/209 (54%), Gaps = 7/209 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           +RFY+ V   E  +G G  V+LD R ++TP +  L +PTL LA+A+ AE    Q + I P
Sbjct: 62  RRFYKSVGVTEGPEGAG--VLLDGRAVRTPGRAGLVVPTLALAEALAAE-WAAQGESIDP 118

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MPL  LA TAL+RV   R  I++ L++    DL+  RA    D  + + ERQ     P
Sbjct: 119 ATMPLTALANTALDRVAPERSAILDTLVRYGGTDLLCYRA----DQPTTLVERQEAAWSP 174

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           LL W+ +  G   VV        Q +  +  + ++++  D + L A  A+AAA  S+ +A
Sbjct: 175 LLDWLATTHGLSLVVTRGLMPVAQPEPTLARLRSVLEGLDLWALTATQALAAAGGSVGLA 234

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           + +  G+L  EEA  L  L++  QV++WG
Sbjct: 235 LAVGGGRLSAEEAFTLAHLDDLFQVERWG 263


>gi|49474372|ref|YP_032414.1| hypothetical protein BQ07910 [Bartonella quintana str. Toulouse]
 gi|49239876|emb|CAF26274.1| hypothetical protein BQ07910 [Bartonella quintana str. Toulouse]
          Length = 261

 Score = 92.0 bits (227), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 110/210 (52%), Gaps = 8/210 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY++V     ++G G++V LD  ++KTP+KR   +PT   A  +  E+  Q+ + I P
Sbjct: 32  KRFYKEVKI-SCEEG-GFSVFLDGCSVKTPAKRHFLVPTEVFAAFVAQEFKSQK-EVIDP 88

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP+ +L  T ++ +      + E L++    D++F RA    +L     +RQ ++ DP
Sbjct: 89  TKMPMTRLVNTVIDGIADDMQVVFEDLLRFVACDMIFYRAQTPKELV----QRQCEQWDP 144

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDD-YELAAIDAIAAAAHSLVI 272
           LL W E + G +  +       +Q    I+ V N ++K +  Y LAA+  +     S +I
Sbjct: 145 LLDWAEEKLGSRFHLAEGLMHIEQPWEAIQAVSNYLRKVESPYMLAALHTMTTLTGSALI 204

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           A+ +  GK+  + A  +  L+E+  +++WG
Sbjct: 205 ALAVAGGKVDSDHAWNIAHLDENWMMEQWG 234


>gi|405952545|gb|EKC20343.1| ATP synthase mitochondrial F1 complex assembly factor 2
           [Crassostrea gigas]
          Length = 283

 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 119/244 (48%), Gaps = 14/244 (5%)

Query: 86  FMTGSIVGKRFYEKVSTREADDGNGW-TVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWD 144
           + TG +  K+FY+     +     GW  V LD R L+TP+    ++P+  LA AI  EW+
Sbjct: 32  YKTGEL--KKFYKNAGIVQ---NQGWFEVNLDQRKLRTPTGNLFQVPSEPLALAIATEWN 86

Query: 145 YQQTDGIRPFMMPLMKLACTALERVPLTRPK--IIEHLMKKFNQDLVFCRAPADNDLTSG 202
            Q+ + I+   M L  L+ T L+  P+ R +  I+  ++     D +  R+    +    
Sbjct: 87  SQK-ETIKRQAMHLTTLSNTVLDN-PMQRSRGDIVRGVLHFLETDTILYRSTEPQEFL-- 142

Query: 203 VHERQVQKIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDA 262
             E Q Q+ DP+LKW  S +  +    +S    +  +   + +   +   +D+ L     
Sbjct: 143 --ELQKQEWDPVLKWFRSSYQVELDSTTSLMPPEIPENTEEVITRKVNSLNDWALVGFQY 200

Query: 263 IAAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSA 322
                 S+++ + I   +L +E+A++L RLE   Q   WG V+  HD+DI  L+ ++++A
Sbjct: 201 GVENLKSIILMLAITDKRLTVEKAVQLARLETLYQTKIWGNVQWHHDVDIYQLQSRVAAA 260

Query: 323 TVFL 326
            +F+
Sbjct: 261 ALFV 264


>gi|226467802|emb|CAX69777.1| putative ATP synthase mitochondrial F1 complex assembly factor 2
           [Schistosoma japonicum]
          Length = 276

 Score = 91.7 bits (226), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 114/242 (47%), Gaps = 15/242 (6%)

Query: 94  KRFYEKVSTREADDGNG----WTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTD 149
           K+FY+ V+  ++   N     + ++LD R L+TP+     +P   LA A+  EWD Q + 
Sbjct: 28  KKFYKNVTIFQSSHENYEQPVFQILLDQRKLRTPTGIHFHVPNEALAVAVAHEWDSQDS- 86

Query: 150 GIRPFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQ 209
            I+ + MPL  L   AL+        ++  +M+  + D +  R    +DL +     Q  
Sbjct: 87  TIKRYTMPLTTLCNRALDTPADQHDILVGAIMQYADSDTICFRCQEPDDLVTV----QSA 142

Query: 210 KIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHS 269
             DP+++WV      KPV+  S     +   L K  E L+   + Y +  +  I +   +
Sbjct: 143 AWDPIIEWVRQRHQIKPVITYSMTSLAKLSPLDK--EKLIGYLNSYNIWGLSGIKSCVEN 200

Query: 270 L---VIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFL 326
           L    + + +  G      A+EL ++E   QV +W  V   HD++ ADL  ++S+A +FL
Sbjct: 201 LKSVYLTLAMLDGFCSAARAVELSQIEMLFQVSRWRDVPSYHDVENADLNARVSAA-LFL 259

Query: 327 GL 328
            L
Sbjct: 260 AL 261


>gi|145245671|ref|XP_001395100.1| ATP12 chaperone protein [Aspergillus niger CBS 513.88]
 gi|134079807|emb|CAK40941.1| unnamed protein product [Aspergillus niger]
 gi|350637639|gb|EHA25996.1| hypothetical protein ASPNIDRAFT_203208 [Aspergillus niger ATCC
           1015]
          Length = 364

 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 80/298 (26%), Positives = 130/298 (43%), Gaps = 43/298 (14%)

Query: 70  QETASSSSSSVTMPMSFMTGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLK 129
           Q+ ASS   S   P+   + S++ KRF++ V  +   DG+ + V+LD R ++TPSK  L 
Sbjct: 64  QKDASSHQKSEKSPLPGKS-SVLKKRFWKNVDVKRKSDGD-YQVLLDTRPIRTPSKDVLS 121

Query: 130 LPTLG--LAKAIGAEWDYQQT--DGIRPFMMPLMKLACTALERVP-------LTRPKIIE 178
           +P+    LA AI  EWD   T    ++  ++PL  L   A +           TR +I++
Sbjct: 122 IPSTKPYLAHAIALEWDVMTTAQQALKNHLIPLTSLTARAADIAAEDARGETTTRDQIVK 181

Query: 179 HLMKKFNQDLVFCRAP-----------ADNDLTSGVHERQVQKIDPLLKWVESEF----G 223
             M+    D + C  P           AD      + E Q++     + ++ ++      
Sbjct: 182 TAMRYLETDTLLCWVPEQNVYAADEVDADGKKPESLREAQIRVAKDTIAFLSTKVWPGVD 241

Query: 224 FKPVVYS-SFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIF----- 277
            +P++ + S     Q       +   +     Y+LA ++    AA SL+IA+ +      
Sbjct: 242 IQPILDTDSILPASQPQATKDIILQWISGLQAYDLAGLERGVLAAKSLLIAVRLVAEWSE 301

Query: 278 ---------RGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFL 326
                    R +  IEEA E   LE   Q D WG VE  HD+D  DL+ Q+ S  V +
Sbjct: 302 TFREVQRPGRERFGIEEAAEASSLEVRWQTDMWGEVEDTHDVDKEDLKRQLGSVIVLV 359


>gi|345480082|ref|XP_003424082.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor
           2-like [Nasonia vitripennis]
          Length = 278

 Score = 91.3 bits (225), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 65/238 (27%), Positives = 116/238 (48%), Gaps = 6/238 (2%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY K  T    +G+ + + LD + LKTP  +  ++ +  LA AI  EWD Q+ D I  
Sbjct: 29  KRFYRK--TGILSNGDKYEITLDQKRLKTPLGKVFEVKSKPLALAIAHEWDSQK-DVINR 85

Query: 154 FMMPLMKLACTALER-VPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKID 212
            +M L  L  T ++    LT+  I  +++     D +  ++  +   +  +++ Q QK D
Sbjct: 86  NLMHLTALCSTVIDNPNKLTKQDIASYIVNFLETDTLLFQSNGNEQESDELYKLQEQKWD 145

Query: 213 PLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTV-ENLMKKTDDYELAAIDAIAAAAHSLV 271
           PL++W    +    V   S    K        + + L+   D+     I  + +   S++
Sbjct: 146 PLIQWFCDRYQVDIVKTRSIEPPKVPQNTKDIITKQLLSHNDEAGFGFIYGVDSVK-SVI 204

Query: 272 IAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGLS 329
           +        + +EEA+ L RLEE+ Q+  WG VE  HD+   DL+ ++++A +F+ L+
Sbjct: 205 LTFAAAERVITVEEAVALSRLEEEFQISHWGNVEWSHDLSKYDLQSRLAAAILFIHLN 262


>gi|357976559|ref|ZP_09140530.1| ATP12 ATPase [Sphingomonas sp. KC8]
          Length = 233

 Score = 91.3 bits (225), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 94/209 (44%), Gaps = 7/209 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+ V+     DG  + + LD R +KTP++  L LPT  LA A+ AEW  Q+ D I P
Sbjct: 2   KRFYKNVAAVAGPDG--FAIELDGRPVKTPARAALLLPTQALADAVVAEWQSQE-DTIDP 58

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MPL  LA  A++RV     K  + +      D+   RA   +DL      RQ +  D 
Sbjct: 59  RSMPLTGLANAAIDRVAPDPLKFAQDIAVYGESDVTCYRADEPDDLVV----RQAEAWDA 114

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           LL W    +     + +      Q D  +  +   +   D + LA +  +     SLV A
Sbjct: 115 LLDWARRRYDVHFEIATGIIHRPQPDATVARLAEAVVARDAFTLAGLSPLTTIGGSLVAA 174

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           + +  G +   EA     L+E  Q  +WG
Sbjct: 175 LAVAEGAVDPAEAFAATHLDELWQAAQWG 203


>gi|83858517|ref|ZP_00952039.1| hypothetical protein OA2633_03421 [Oceanicaulis sp. HTCC2633]
 gi|83853340|gb|EAP91192.1| hypothetical protein OA2633_03421 [Oceanicaulis sp. HTCC2633]
          Length = 246

 Score = 90.9 bits (224), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 108/209 (51%), Gaps = 8/209 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY++VST+  +   GW+++LD R +KTP+KR L +P+  LA A+ AEW  Q+T  I P
Sbjct: 15  KRFYKEVSTQPGE--GGWSILLDGRPVKTPAKRALHVPSETLATALAAEWAAQET-VIDP 71

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
           F MP+ ++   AL+R+   R    E +      DL+  RA       S +  RQ +  DP
Sbjct: 72  FTMPITRILHVALDRMEAVREGAAEEVANFGRTDLLSHRAE-----ESQLAARQAELWDP 126

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
            L+W ++         ++    +Q +  I  ++      DD  L A+ ++     S ++A
Sbjct: 127 YLEWAKTALDAPLNAAATVLALEQPESSIAALKARALAQDDLRLTALVSVTPILGSAILA 186

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
             +  G+   E   +  R+++D Q+++WG
Sbjct: 187 FALLEGEADAEAVWKAARVDDDYQIERWG 215


>gi|125984652|ref|XP_001356090.1| GA21252 [Drosophila pseudoobscura pseudoobscura]
 gi|54644408|gb|EAL33149.1| GA21252 [Drosophila pseudoobscura pseudoobscura]
          Length = 278

 Score = 90.9 bits (224), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 69/242 (28%), Positives = 117/242 (48%), Gaps = 18/242 (7%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+K S    D   G+ V+LD+R LKTP   P  + +  LA A+  E+D Q+ D I  
Sbjct: 37  KRFYKKTSVLYTD--GGYEVVLDHRKLKTPKGAPFTVKSEPLAIAVATEFDSQR-DHIER 93

Query: 154 FMMPLMKLACTALER-VPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKID 212
             M L  L  TA++    L +  ++ +L+     D V  +   + DL     E Q  + D
Sbjct: 94  SRMHLSALCFTAIDNPNNLNKLDMVNYLLNYMPTDTVLFQYDDERDL----KELQKNEWD 149

Query: 213 PLLKWVESEFG--FKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAA--- 267
           P+++W    FG   +  +  +      ED +      + K    Y L  +     A    
Sbjct: 150 PVIEWFNQRFGTNLQKTMNITPPTITDEDRV-----KVAKHFQSYNLDTLHGFVYAVDTL 204

Query: 268 HSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLG 327
            S+++A  +    L +E+A+ L RLEE+ Q+  WG VE  HD+   +L+ +++++ +F+ 
Sbjct: 205 KSIILACAVIEQMLPVEKAVALSRLEEEYQIKFWGRVEWSHDLSQQELQARLAASVLFVQ 264

Query: 328 LS 329
           L+
Sbjct: 265 LN 266


>gi|316933566|ref|YP_004108548.1| ATPase [Rhodopseudomonas palustris DX-1]
 gi|315601280|gb|ADU43815.1| ATP12 ATPase [Rhodopseudomonas palustris DX-1]
          Length = 261

 Score = 90.9 bits (224), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 99/210 (47%), Gaps = 8/210 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY +     A++  G+ V LD R++KTPS+  L  P   LA+AI AEW   Q + I P
Sbjct: 30  KRFYTEAGV--AEENGGFAVRLDGRSVKTPSRNALAAPDRALAEAIAAEWQ-AQGETIDP 86

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MPL +LA + ++ V      + + + K F  DL+F RA    +L +    R+    DP
Sbjct: 87  STMPLTRLANSVIDGVAGRINAVTDDIAKYFGSDLLFYRAEHPEELIA----REAAHWDP 142

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           +L W    FG   ++        Q +             D + + A+  +     S ++A
Sbjct: 143 VLYWAAEAFGAHFILAQGIIHAAQPE-TAIAAARAALPADPWSIGALHVVTTITGSALLA 201

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWGL 303
           + +  G+L  ++      ++ED  +++WGL
Sbjct: 202 LALAHGRLDADQVWAAAHVDEDWNIEQWGL 231


>gi|397676695|ref|YP_006518233.1| ATP12 ATPase [Zymomonas mobilis subsp. mobilis ATCC 29191]
 gi|395397384|gb|AFN56711.1| ATP12 ATPase [Zymomonas mobilis subsp. mobilis ATCC 29191]
          Length = 234

 Score = 90.9 bits (224), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 105/209 (50%), Gaps = 7/209 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+K +  +A+   G+ V LD R + TP++ PL LPT  LA+A+  EW+ Q  + I P
Sbjct: 4   KRFYKKATVDKAE--IGFAVKLDDRQIMTPARHPLILPTRALAEAVAEEWNNQPKE-IDP 60

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP+   A  A++ VP      +  + +    D+   RA    D    + +R+++  +P
Sbjct: 61  ASMPITGYANAAVDLVPDRYDDFVAGIRQFAESDVTCYRA----DSPQALVDREIELWEP 116

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           LL+W E  F             KQ +  ++ +   +   + +E+ A+  +A  + SLVI 
Sbjct: 117 LLEWAEKRFDVHFHRVVGIIHKKQPEMTLQRIGAAVSDFNHFEIVALTQLATISGSLVIP 176

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           + I   ++  E+A +   ++E  Q ++WG
Sbjct: 177 LAILADEITPEKAFDAAHIDEIWQAEQWG 205


>gi|56551337|ref|YP_162176.1| ATP12 ATPase [Zymomonas mobilis subsp. mobilis ZM4]
 gi|56542911|gb|AAV89065.1| ATP12 ATPase [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 234

 Score = 90.9 bits (224), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 105/209 (50%), Gaps = 7/209 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+K +  +A+   G+ V LD R + TP++ PL LPT  LA+A+  EW+ Q  + I P
Sbjct: 4   KRFYKKATVDKAE--IGFAVKLDDRQIMTPARHPLILPTRALAEAVAEEWNNQPKE-IDP 60

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP+   A  A++ VP      +  + +    D+   RA    D    + +R+++  +P
Sbjct: 61  ASMPITGYANAAVDLVPDRYDDFVAGIRQFAESDVTCYRA----DSPQALVDREIELWEP 116

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           LL+W E  F             KQ +  ++ +   +   + +E+ A+  +A  + SLVI 
Sbjct: 117 LLEWAEKRFDIHFHRVVGIIHKKQPEVTLQRIGAAVTDFNHFEIVALTQLATISGSLVIP 176

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           + I   ++  E+A +   ++E  Q ++WG
Sbjct: 177 LAILADEITPEKAFDAAHIDEIWQAEQWG 205


>gi|342320512|gb|EGU12452.1| Hypothetical Protein RTG_01486 [Rhodotorula glutinis ATCC 204091]
          Length = 675

 Score = 90.9 bits (224), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 66/234 (28%), Positives = 112/234 (47%), Gaps = 28/234 (11%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPT--LGLAKAIGAEWDYQQTDGI 151
           KRF++ V      +GN + V+LD RTLKTP   PL +P   L +A  I  EW+ Q++  +
Sbjct: 46  KRFWKTVGVEGRPEGN-FAVLLDKRTLKTPGGVPLLVPKERLPVALCIADEWENQKSV-L 103

Query: 152 RPFMMPLM------------------KLACTALERV--PLTRPKIIEHLMKKFNQDLVFC 191
           +P  +P++                   +A  A++ +    TR  ++ +L++  + D V  
Sbjct: 104 KPHTLPMVGRTHFYRCGARLTVVSQTSIAARAIDGLNNESTRKDVVAYLLRYLDTDTVCF 163

Query: 192 RAPADNDLTSGVHERQVQKIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKK 251
                 +    + + Q     PL+ WVE  +  K  +Y      KQ D  I  + +++  
Sbjct: 164 H----EEFPQRLVKLQEAHWKPLIDWVEKTYDVKVNLYEGILNTKQPDATILKLGSVVSD 219

Query: 252 TDDYELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVE 305
            D Y+LAA +    A+ S +IA+G+  G L  +EA +   +E   Q+D+WG VE
Sbjct: 220 YDAYKLAAFERAVLASKSYLIALGLVEGFLSADEAAKAAHVEVQSQIDRWGEVE 273


>gi|365854762|ref|ZP_09394830.1| ATP12 chaperone protein [Acetobacteraceae bacterium AT-5844]
 gi|363719822|gb|EHM03118.1| ATP12 chaperone protein [Acetobacteraceae bacterium AT-5844]
          Length = 235

 Score = 90.9 bits (224), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 65/214 (30%), Positives = 104/214 (48%), Gaps = 13/214 (6%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRF++  +    ++G G+TV+LD R L+ P   PL LPTL LA+A+  EW  ++  G + 
Sbjct: 2   KRFWDTATPAPREEG-GFTVLLDGRPLRLPGGGPLHLPTLPLAEAVAEEW--REAGGAKG 58

Query: 154 F-----MMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQV 208
                 M+PL ++  TA++RV  + P+     + ++ +  + C    D+ L +     Q 
Sbjct: 59  GEMTMEMVPLTRVIGTAIDRV-ASNPQPSIDAIAEYGETDLLCYRGEDSRLAA----IQA 113

Query: 209 QKIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAH 268
            +  PLL W E   G    V S     +Q    +  ++  +      EL AI        
Sbjct: 114 AEWQPLLDWAEQALGAPLKVTSGIIHVRQPPESLAALKRAVAALPPLELTAIGLAVPLLG 173

Query: 269 SLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           SLV+ + +  G+L  EEA  L R++ED Q D WG
Sbjct: 174 SLVLGLALAHGRLDAEEATRLARVDEDWQQDFWG 207


>gi|427429385|ref|ZP_18919420.1| Chaperone protein [Caenispirillum salinarum AK4]
 gi|425880578|gb|EKV29274.1| Chaperone protein [Caenispirillum salinarum AK4]
          Length = 242

 Score = 90.9 bits (224), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 115/252 (45%), Gaps = 14/252 (5%)

Query: 77  SSSVTMPMSFMTGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLA 136
           SS V  PM         KRFY+      A+ G    V LD R ++TPSK  L +P   LA
Sbjct: 2   SSLVNRPM---------KRFYKTAEAVPAEGGLH-AVHLDGRPVRTPSKAALAVPFPALA 51

Query: 137 KAIGAEWDYQQTDGIRPFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPAD 196
           +AI AEW+ +Q + +    MPL +LA +A++RV   R  +IE +++    +L+  R    
Sbjct: 52  EAIAAEWN-EQGETLVLDNMPLTQLANSAIDRVAPLRDTMIEEVLRFAETELLCYRV--A 108

Query: 197 NDLTSGVHERQVQKIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYE 256
               + +  RQ     PLL W    +       +      Q    ++ +   +   DD+ 
Sbjct: 109 EAEDAALAARQASTWQPLLDWARQRYDAALCHTAGLMPVDQPPEALRALRAAVADLDDWR 168

Query: 257 LAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLR 316
           L A+ A AA   SLV+A+ +  G+L  E A     L+E  Q++ WG  +      +   R
Sbjct: 169 LTALQAAAAPLGSLVLALALLEGRLDAEAAYRAAYLDELFQMEHWG-ADAEAQARLERQR 227

Query: 317 VQISSATVFLGL 328
             I+ A  FL L
Sbjct: 228 KDIADAARFLAL 239


>gi|319407392|emb|CBI81043.1| conserved hypothetical protein [Bartonella sp. 1-1C]
          Length = 261

 Score = 90.5 bits (223), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 67/210 (31%), Positives = 104/210 (49%), Gaps = 8/210 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFYEKV      +G  + ++LD R LKTP+KR   LP   LA  +  E+  Q+   I P
Sbjct: 31  KRFYEKVDVT-CKEGK-FFILLDGRLLKTPAKRDFFLPVEMLAGLVAQEFTAQKA-VIDP 87

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP+ +L  T ++ V      I E L++    D++F RA    +L     +RQ +K D 
Sbjct: 88  AKMPITRLVNTVIDGVIDNMQIIFEDLLRFVACDMIFYRAQTPKELV----KRQSEKWDF 143

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDD-YELAAIDAIAAAAHSLVI 272
           LL W E   G    +       +Q    I+ V N ++K +  Y LAA+ A+     S +I
Sbjct: 144 LLDWAEERLGTHFNLVEGLMHVEQPPESIQAVSNYLRKIESPYTLAALHAMTTLTGSALI 203

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           A  +   K+  ++A  +  L+ED  +++WG
Sbjct: 204 AFAVAERKICTDDAWAIAHLDEDWTMEQWG 233


>gi|348688884|gb|EGZ28698.1| hypothetical protein PHYSODRAFT_248127 [Phytophthora sojae]
          Length = 228

 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/180 (35%), Positives = 94/180 (52%), Gaps = 14/180 (7%)

Query: 95  RFYEKVSTRE-----ADDGNG----WTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDY 145
           RFY+ V  ++     A+DG      + V LD +T+KTP ++P++LPT  +A A+  EWD 
Sbjct: 39  RFYKDVGVKDVEEPAAEDGAEPRMLFAVTLDGKTVKTPRQQPVRLPTRAMAYAVAHEWDA 98

Query: 146 QQTDGIRPFMMPLMKLACTALERVPLTRPK-IIEHLMKKFNQDLVFCRAPADNDLTSGVH 204
           Q  D IRP  MP+M LA TAL+ V  +  K  I+ +M   + D V  +  AD      + 
Sbjct: 99  QSHD-IRPATMPVMSLASTALDLVFTSSSKETIDEMMHYLHTDTVCYQVTADQQ--EKLV 155

Query: 205 ERQVQKIDPLLKWVESEF-GFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAI 263
            +Q +K  PL KW    F G   V + S      +  LI  V   ++K +D+EL A+ A+
Sbjct: 156 AQQQKKWKPLRKWFSDTFEGEVDVSHGSINSLTHDQQLIDNVRAYLEKLNDFELTAMRAL 215


>gi|294085987|ref|YP_003552747.1| chaperone [Candidatus Puniceispirillum marinum IMCC1322]
 gi|292665562|gb|ADE40663.1| Chaperone [Candidatus Puniceispirillum marinum IMCC1322]
          Length = 232

 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/209 (33%), Positives = 94/209 (44%), Gaps = 8/209 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+ V   EAD   GW + LD R +KTP+   L +PT  LA AI AEWD  Q D I+P
Sbjct: 5   KRFYKDVRAIEAD--TGWQIALDGRAVKTPAGSQLCMPTAALASAIAAEWD-AQDDDIKP 61

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MPL   A TA +RV   R  +I  +      DL+  RA   +         Q      
Sbjct: 62  ASMPLFAYAVTACDRVASQRAAVIAEITSYGGNDLLCYRADDADLAARQAAAWQ-----N 116

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
            L W   E     +V  S     Q D  +  + + +   D++ LA +    +   SLV+ 
Sbjct: 117 WLDWAARELEAPLIVAHSIMPVNQPDHAVAALRHCVAAYDEWHLAILHRTVSLGGSLVMG 176

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           +   RG +  E       L+E  QV+KWG
Sbjct: 177 LAWIRGDIDSENFFATTFLDELWQVEKWG 205


>gi|195161709|ref|XP_002021704.1| GL26360 [Drosophila persimilis]
 gi|194103504|gb|EDW25547.1| GL26360 [Drosophila persimilis]
          Length = 278

 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 121/252 (48%), Gaps = 38/252 (15%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+K S    D   G+ V+LD+R LKTP   P  + +  LA A+  E+D Q+ D I  
Sbjct: 37  KRFYKKTSVLYTD--GGYEVVLDHRKLKTPKGAPFTVKSEPLAIAVATEFDSQR-DHIER 93

Query: 154 FMMPLMKLACTALER-VPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKID 212
             M L  L  TA++    L +  ++ +L+     D V  +   + DL     E Q  + D
Sbjct: 94  SRMHLSALCFTAIDNPNNLNKLDMVNYLLNYMPTDTVLFQYDDERDLK----ELQKNEWD 149

Query: 213 PLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTV---------ENLMKKTDDYELAAIDAI 263
           P+++W               F  + E  L KT+         E+ +K    ++  ++D +
Sbjct: 150 PVIEW---------------FNQRFETNLQKTMNITPPTITDEDRVKVAKHFQSYSLDTL 194

Query: 264 AAAAH------SLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRV 317
               +      S+++A  +    L +E+A+ L RLEE+ Q+  WG VE  HD+   +L+ 
Sbjct: 195 HGFVYAVDTLKSIILACAVIEQMLPVEKAVALSRLEEEYQIKFWGRVEWSHDLSQQELQA 254

Query: 318 QISSATVFLGLS 329
           +++++ +F+ L+
Sbjct: 255 RLAASVLFIQLN 266


>gi|393768102|ref|ZP_10356644.1| ATP12 ATPase [Methylobacterium sp. GXF4]
 gi|392726495|gb|EIZ83818.1| ATP12 ATPase [Methylobacterium sp. GXF4]
          Length = 262

 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 100/210 (47%), Gaps = 8/210 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           +RFY++    E  DG  + + LD R   TP++ PL LPT  LA+ + AEW  Q T  I P
Sbjct: 34  RRFYQEAGFAEGPDG--FRLTLDGRPANTPARNPLSLPTRALAEKVAAEWAAQDT-VIDP 90

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MPL +LA T+++ V      ++E L      DL+  RA     L S     Q    DP
Sbjct: 91  ARMPLTRLANTSIDGVAPRHAAVVEDLCAYAGTDLLAYRAGDPERLVSA----QAASWDP 146

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDD-YELAAIDAIAAAAHSLVI 272
           +L W    FG + ++       +Q    ++ + + +   +  + LA +  +     SL+I
Sbjct: 147 ILDWARETFGARVILSEGVMHVEQPPDTVRALSDAVAAVESPFRLAGLHTLTTLTGSLLI 206

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           A+ + RG+L   EA +   ++E  Q   WG
Sbjct: 207 ALAVLRGRLSPAEAWDAAHVDETYQAAIWG 236


>gi|452752884|ref|ZP_21952623.1| ATP12 ATPase [alpha proteobacterium JLT2015]
 gi|451959706|gb|EMD82123.1| ATP12 ATPase [alpha proteobacterium JLT2015]
          Length = 229

 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 71/235 (30%), Positives = 108/235 (45%), Gaps = 8/235 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFYEK + R  D+G  W V LD R L+TP + PL LPT  +A+A+ AEWD  Q D I P
Sbjct: 2   KRFYEKAAARRTDEG--WQVELDGRPLRTPKRAPLILPTEAMAQAVAAEWD-AQGDLIDP 58

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             M +  +A  A++ V   R      +      DLV  RA     L +    RQ    DP
Sbjct: 59  ASMAMTGIANAAIDHVSADRLGFASRIAAYGETDLVCYRASGPEPLAA----RQCAAWDP 114

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           L+ W    +     +        Q    +  +   +   DD+ LAA   I     SLV+ 
Sbjct: 115 LIAWAARRYDIAFELTEGLMPQPQPQPTLSKLSAALDAFDDFALAAAQPIVTITGSLVVT 174

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGL 328
           + +   ++  E A    +++E  Q+++WG  +   +  +A  R ++ +A  FL L
Sbjct: 175 LALLEREIDAETAWLAGQVDELYQMEEWG-ADAEAEAVLARRRSELETAARFLSL 228


>gi|393906464|gb|EFO22807.2| hypothetical protein LOAG_05675 [Loa loa]
          Length = 276

 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 115/239 (48%), Gaps = 11/239 (4%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFYE+           + + LD   L TP + P+K+ +  LA A+  EW+ Q+ D +R 
Sbjct: 21  KRFYEEARVVFKPMEEVYNIYLDKHNLVTPKRNPVKIYSEALALAVAEEWNMQK-DELRM 79

Query: 154 FMMPLMKLACTALER-VPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKID 212
            +M L  L  TA++  + L +  ++  +++  ++D V  R   +++L     E +    +
Sbjct: 80  DLMRLTGLIFTAIDNPMSLKKSDLLSQVLQFLDKDTVLYRLVENSNLL----ELEEANWN 135

Query: 213 PLLKWVESEFGF--KPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSL 270
           P+++WV  E+G   KP  YS       ++     + N +      +L  +     A  S+
Sbjct: 136 PVVEWVNWEYGLSAKPS-YSLVEEAVIDNNSRVRLANQLSNYSFLQLIGLQYATEALKSV 194

Query: 271 VIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADL--RVQISSATVFLG 327
            + +     +L + EA+EL  LE+  Q D WG VE  HDI+  +L  R+ + S  V LG
Sbjct: 195 FLTLATVSSRLHVNEAVELALLEQKYQSDIWGKVEWAHDIEREELISRLSVGSLLVHLG 253


>gi|414162183|ref|ZP_11418430.1| hypothetical protein HMPREF9697_00331 [Afipia felis ATCC 53690]
 gi|410879963|gb|EKS27803.1| hypothetical protein HMPREF9697_00331 [Afipia felis ATCC 53690]
          Length = 258

 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 101/209 (48%), Gaps = 8/209 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFYE     E  +G  + V LD + ++TP KR L  P   LA+A+  EW   Q + I P
Sbjct: 30  KRFYESAGVAETPEG--FAVTLDGKPVRTPGKRFLGAPVRELAEAMATEWG-AQAEMIDP 86

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP+ +LA + ++ V      + + + K F+ DL+F RA    +L +     Q +  DP
Sbjct: 87  LSMPMTRLANSTVDGVADDVVAVRDDIAKYFDTDLLFYRASFPEELIA----LQAEHWDP 142

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           +L+W+  E G   ++       KQ +  +  V   + +T  + +AA+  +     S ++A
Sbjct: 143 VLRWLADELGAHFILAEGVMHVKQPEPAVHAVRQALPET-PWAVAALHVVTTITGSALLA 201

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           + + R  L  ++      ++ED    +WG
Sbjct: 202 LALHRKALTADQVWAAAHVDEDWNSQQWG 230


>gi|407919161|gb|EKG12416.1| ATP12 ATPase F1F0-assembly protein [Macrophomina phaseolina MS6]
          Length = 365

 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 79/279 (28%), Positives = 118/279 (42%), Gaps = 42/279 (15%)

Query: 89  GSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLP--TLGLAKAIGAEWDY- 145
           GS + KRF+ +V  ++  DG+   V+LD R ++T SK  L +P     LA AI  EWD  
Sbjct: 88  GSALQKRFWREVHVKQTPDGH--QVLLDSRPVRTASKNVLTIPPNKQQLAAAIALEWDLL 145

Query: 146 -QQTDGIRPFMMPLMKLACTALERVPL-------TRPKIIEHLMKKFNQDLVFCRAPADN 197
                 ++   +PL  L   A++            R  I++ LM     D + C AP  N
Sbjct: 146 LNAQQALKQHYIPLTSLTSRAIDIQAADASGDSSIRDSIVKMLMNYLTTDTLLCWAPEKN 205

Query: 198 -----DLTSGVHE-RQVQ--KIDPLLKWVESEFG----FKPVVY-SSFFGGKQEDGLIKT 244
                DL  G    RQVQ     P++ ++ ++       KP++   S     Q    +  
Sbjct: 206 IHEAKDLGEGAETLRQVQMRTAQPIINFLTTKLWPGVEIKPILEPDSILPVPQPPNTVDV 265

Query: 245 VENLMKKTDDYELAAIDAIAAAAHSLVIAIGIF----------------RGKLQIEEAIE 288
           V   +     +ELA I+    A+ SL++A  +                  G+  IEEA E
Sbjct: 266 VRGWLSALPAWELAGIERGVLASKSLLVAARLLAEWSSEFAHIRENQPDEGRFGIEEAAE 325

Query: 289 LIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLG 327
              LE   Q   WG VE  HD+D  DLR Q+ S  + + 
Sbjct: 326 ASSLEVSWQTGMWGEVEDTHDVDKEDLRRQLGSVVLLVN 364


>gi|395790920|ref|ZP_10470379.1| hypothetical protein MEC_00370 [Bartonella alsatica IBS 382]
 gi|395409216|gb|EJF75815.1| hypothetical protein MEC_00370 [Bartonella alsatica IBS 382]
          Length = 260

 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 58/217 (26%), Positives = 107/217 (49%), Gaps = 8/217 (3%)

Query: 87  MTGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQ 146
           ++   + KRFY++V      +  G++++LD   +KTP+KR   +PT   A  +  E++ Q
Sbjct: 24  LSSQTLSKRFYKEVKI--LCEEKGFSLLLDEYPVKTPAKRHFLVPTEVFATLVAQEFESQ 81

Query: 147 QTDGIRPFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHER 206
           + + I P  MP+  L  T ++ +      + E +++    D++F R     +L     +R
Sbjct: 82  K-EVINPAKMPITCLVNTVIDGIADDMQAVFEDVLRFVACDMIFYRVQTPKELV----QR 136

Query: 207 QVQKIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDD-YELAAIDAIAA 265
           Q ++ D LL W E   G +  +       KQ    I+ V N ++K +  Y LAAI  +  
Sbjct: 137 QCEQWDSLLDWAEGTLGARFYLTEGLMHVKQSREAIQAVSNYLRKIESPYVLAAIHTMTT 196

Query: 266 AAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
              S +IA+ +   K+  + A  +  L+ED  +++WG
Sbjct: 197 LTGSALIALAVAAKKIDADHAWVIAHLDEDWVIEQWG 233


>gi|195115557|ref|XP_002002323.1| GI17323 [Drosophila mojavensis]
 gi|193912898|gb|EDW11765.1| GI17323 [Drosophila mojavensis]
          Length = 278

 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 115/242 (47%), Gaps = 18/242 (7%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+  +    D  +G+ V LD+R LKTP+     + +  LA A+  E+D Q+ + I  
Sbjct: 37  KRFYKTTNVLSTD--SGYEVTLDHRKLKTPNGTLFTVKSEPLAIAVATEFDAQK-EHIER 93

Query: 154 FMMPLMKLACTALER-VPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKID 212
             M +  L  TA++    LT+P ++ +L+     D V  +   + DL     E Q  + D
Sbjct: 94  SRMHISALCFTAIDNPNKLTKPDMVNYLLNFIATDTVLFQYDNEKDL----QELQQNEWD 149

Query: 213 PLLKWVESEF--GFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAA--- 267
           P++ W    F    K  +  +      ED +      + K    Y L  +     A    
Sbjct: 150 PVIDWFNQRFETNLKKTMDITPPQVSDEDKM-----KIAKHFHSYNLETLHGYIFAVDTL 204

Query: 268 HSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLG 327
            S+V+A  +   K+ +E A+ L RLEE+ Q+  WG VE  HD    +L+ ++++A +F+ 
Sbjct: 205 KSIVLACAVIEQKITVERAVALSRLEEEYQLKFWGRVEWAHDFSQQELQARLAAAVLFVH 264

Query: 328 LS 329
           L+
Sbjct: 265 LN 266


>gi|260753044|ref|YP_003225937.1| ATP12 ATPase [Zymomonas mobilis subsp. mobilis NCIMB 11163]
 gi|258552407|gb|ACV75353.1| ATP12 ATPase [Zymomonas mobilis subsp. mobilis NCIMB 11163]
          Length = 234

 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 104/209 (49%), Gaps = 7/209 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+K +  +A+   G+   LD R + TP++ PL LPT  LA+A+  EW+ Q  + I P
Sbjct: 4   KRFYKKATVDKAE--IGFAAKLDDRQIMTPARHPLILPTRALAEAVAEEWNNQPKE-IDP 60

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP+   A  A++ VP      +  + +    D+   RA    D    + +R+++  +P
Sbjct: 61  ASMPITGYANAAVDLVPDRYDDFVAGIRQFAESDVTCYRA----DSPQALVDREIELWEP 116

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           LL+W E  F             KQ +  ++ +   +   + +E+ A+  +A  + SLVI 
Sbjct: 117 LLEWAEKRFDIHFHRVVGIIHKKQPEVTLQRIGAAVTDFNHFEIVALTQLATISGSLVIP 176

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           + I   ++  E+A +   ++E  Q ++WG
Sbjct: 177 LAILADEITPEKAFDAAHIDEIWQAEQWG 205


>gi|302382667|ref|YP_003818490.1| ATP12 ATPase [Brevundimonas subvibrioides ATCC 15264]
 gi|302193295|gb|ADL00867.1| ATP12 ATPase [Brevundimonas subvibrioides ATCC 15264]
          Length = 252

 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 93/210 (44%), Gaps = 7/210 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRF++  S   A DG G  V+LD R  KTP+   + LPT   A+ +  EW   Q + I P
Sbjct: 25  KRFWKDASV--APDGEGHVVLLDGRAPKTPAHARMVLPTEAAARLVADEW-AAQGEFIEP 81

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP  +LA TA++RV  TR  + + +      DL+   A    +L +     Q +   P
Sbjct: 82  GTMPATRLAATAIDRVSQTREPVADEIASYVGSDLLCYLAEHPTNLVA----EQARDWAP 137

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
              W  +E G             Q    +  V+ L  + DD+ L  +        S ++ 
Sbjct: 138 WRHWAGAELGVHVEATQGIIHRPQPPETLARVKTLALELDDFALTGLATAVPLFGSAILG 197

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWGL 303
           + + RG L    A E+ RL+E  Q  +WG+
Sbjct: 198 LAVQRGALSGAAAFEISRLDEAFQERQWGV 227


>gi|121602261|ref|YP_989030.1| ATP12 chaperone family protein [Bartonella bacilliformis KC583]
 gi|421760834|ref|ZP_16197647.1| ATP12 chaperone family protein [Bartonella bacilliformis INS]
 gi|120614438|gb|ABM45039.1| ATP12 chaperone family protein [Bartonella bacilliformis KC583]
 gi|411174150|gb|EKS44184.1| ATP12 chaperone family protein [Bartonella bacilliformis INS]
          Length = 261

 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 61/222 (27%), Positives = 109/222 (49%), Gaps = 8/222 (3%)

Query: 87  MTGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQ 146
           ++  ++ KRFY+ VS     +  G +++LD R + TP+KR + +PT  LA  +  E+  Q
Sbjct: 24  LSHQLLMKRFYKDVSI--VREERGVSILLDGRPITTPAKRHIFVPTEALAALVAQEFKIQ 81

Query: 147 QTDGIRPFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHER 206
           +   I P  MP+ +L  T ++ +      I E L++    D++F RA    +L     +R
Sbjct: 82  EK-VIDPAKMPITRLINTVIDGIADNMQVIFEDLLRFVACDMIFYRAQTPKELA----KR 136

Query: 207 QVQKIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDD-YELAAIDAIAA 265
           Q +  D LL W E + G +  +       +Q    I  V N ++K +  Y LAA+  +  
Sbjct: 137 QCEHWDFLLDWAEEKIGARFNIAEGVMHIEQPWESIHAVSNYLRKIESPYVLAALHTMTT 196

Query: 266 AAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGG 307
              S +IA  +   K+ ++ A  +  L+ED  +++W + E  
Sbjct: 197 LTGSALIAFAVAEKKIDLDHAWSIAHLDEDWTIEQWKVDEEA 238


>gi|254486708|ref|ZP_05099913.1| ATP12 ATPase [Roseobacter sp. GAI101]
 gi|214043577|gb|EEB84215.1| ATP12 ATPase [Roseobacter sp. GAI101]
          Length = 239

 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 98/210 (46%), Gaps = 7/210 (3%)

Query: 93  GKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIR 152
            KRF+       A+   G+ V LD R LKTP+KR L +PT  +A+A+ AEW  Q+   I 
Sbjct: 6   AKRFWTTAQVVAAE--GGYAVELDGRPLKTPAKRSLIVPTEQMAQAVAAEWQAQEG-TID 62

Query: 153 PFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKID 212
           P  MP  K A  AL++V +   ++ + L    + DL+  RA +  +L     ERQ    D
Sbjct: 63  PRTMPCTKTANAALDKVAIQHAEVADMLAAYGDCDLLCYRADSPQELV----ERQNALWD 118

Query: 213 PLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVI 272
           P+L W E     +           Q+  ++  + +     D ++LAA   + + + SLV+
Sbjct: 119 PMLDWAEEALEVRLAPRVGIMHVPQDAAVVARLTDRTHALDKFQLAAFHDLVSLSGSLVL 178

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
                      +   +L RL+E  Q + WG
Sbjct: 179 GFAATLNARDTDTLWDLSRLDEIWQAELWG 208


>gi|84499809|ref|ZP_00998097.1| hypothetical protein OB2597_07760 [Oceanicola batsensis HTCC2597]
 gi|84392953|gb|EAQ05164.1| hypothetical protein OB2597_07760 [Oceanicola batsensis HTCC2597]
          Length = 237

 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/210 (31%), Positives = 107/210 (50%), Gaps = 7/210 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRF++ V+  E++ G G  V LD R ++TP+KRPL +PT  LA+A+ AE    Q D + P
Sbjct: 7   KRFWKTVAVTESEGGFG--VALDGRPVRTPAKRPLVVPTRALAEAVAAE-WEAQEDVLDP 63

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP  + A  A+++V L   ++   L    + DL+  RA    D  +G+  RQ +  DP
Sbjct: 64  RTMPATRGANAAIDKVALQHAEVAGMLAAYGDSDLLCYRA----DSPAGLVARQAEGWDP 119

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           LL W E   G + +  +      Q    +  +   +     ++LAA   + +   SLV+ 
Sbjct: 120 LLDWAEEALGARLMPRAGVMHEPQNPEALNRLSAAVHALGPFQLAAFHDLVSLTGSLVLG 179

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWGL 303
               R    +EE  +L R++ED Q ++WG+
Sbjct: 180 FAAAREVRPVEEIWDLSRIDEDWQAEQWGI 209


>gi|365896495|ref|ZP_09434567.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3843]
 gi|365422753|emb|CCE07109.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3843]
          Length = 261

 Score = 88.6 bits (218), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 99/212 (46%), Gaps = 7/212 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY++   +EA+ G G+ V LD R ++TPS + + +P  GLA+A+ AEW   Q + + P
Sbjct: 30  KRFYKQAGVKEAE-GGGYAVTLDDRPIRTPSGQIVVIPVKGLAEAVAAEWQ-AQGETLNP 87

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MPL + A + +E V      + + + K    DL+F RA   + L      R+ Q  DP
Sbjct: 88  LTMPLTRFANSVMEGVVGRTDLVRDDIAKYLRSDLLFYRASHPDALV----RREAQHWDP 143

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           +L W         ++        Q D  +      + + D + +AA   +     S ++A
Sbjct: 144 VLDWARDTLAAHFMMAEGVMHVAQPDAAVAAAHAALPR-DAWRIAAAHVVTTITGSALLA 202

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWGLVE 305
           + +  G    ++      ++ED   ++WG  E
Sbjct: 203 LALVHGVRDADQVWAAAHVDEDWNAEQWGADE 234


>gi|90417734|ref|ZP_01225646.1| conserved hypothetical protein [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90337406|gb|EAS51057.1| conserved hypothetical protein [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 240

 Score = 88.6 bits (218), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 103/210 (49%), Gaps = 8/210 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY +V+    DDG  + V+LD R +KTP +RPL +P    A+ + AEW  Q+ + I P
Sbjct: 12  KRFYSEVTLAPTDDG--FAVLLDGRPVKTPGRRPLAVPMQRAAEVVAAEWGAQR-ERIDP 68

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP+ +L  T +E +      + + L +    DL+F RA     L +    RQ +  DP
Sbjct: 69  ATMPMTRLVNTVVEAIADDPIPVRDDLARYIETDLLFYRAGTPERLVA----RQQELWDP 124

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDD-YELAAIDAIAAAAHSLVI 272
           +L W    FG + ++        Q    I   +  +   DD +++AA+        S ++
Sbjct: 125 VLDWARDSFGARYLLTEGVMHVAQPPAAIAAFKERLAGIDDPFKVAAMHQATTLTGSALL 184

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           A+ +  G+L  E+      ++ED  +++WG
Sbjct: 185 ALALAEGQLSAEDVWLRAHVDEDWNIEQWG 214


>gi|94498528|ref|ZP_01305084.1| hypothetical protein SKA58_04516 [Sphingomonas sp. SKA58]
 gi|94422071|gb|EAT07116.1| hypothetical protein SKA58_04516 [Sphingomonas sp. SKA58]
          Length = 231

 Score = 88.2 bits (217), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 62/237 (26%), Positives = 109/237 (45%), Gaps = 8/237 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+ V+     +G  + + LD R ++TP++  L LPT  LA+A+ AEW  Q+ + I P
Sbjct: 2   KRFYKDVAIVAGSEG--FAIELDGRAVRTPARALLALPTRNLAEAVAAEWRAQEGE-INP 58

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             M    L+  A++ +          + +    DL+  RA   + L +    RQ    DP
Sbjct: 59  AAMIFTGLSNAAIDHIAPNPGAFAAGIARYAQSDLLCYRADGPDALVA----RQAAAWDP 114

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           LL W  S +    +V        Q +  +  +E  ++  D + LA +  +   + SL+  
Sbjct: 115 LLDWAASRYDAPMIVTQGVIPVSQPEDSLARLEAAVRTHDPFMLAGLSTLVTLSGSLICG 174

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGLSR 330
           + I  G    EE  + ++++E  Q ++WG        ++   R + S+A  F  +SR
Sbjct: 175 LAIAEGGYDPEELWQAVQVDEQWQSEQWGEDSEAAARNLLRAR-EFSTAGAFCTMSR 230


>gi|146341532|ref|YP_001206580.1| chaperone protein [Bradyrhizobium sp. ORS 278]
 gi|146194338|emb|CAL78362.1| conserved hypothetical protein; putative chaperone protein
           [Bradyrhizobium sp. ORS 278]
          Length = 260

 Score = 88.2 bits (217), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 104/213 (48%), Gaps = 10/213 (4%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY++  T EA+ G+   V LD R ++TPS R + +P   LA+A+ AEW   Q + I P
Sbjct: 30  KRFYKEAGTAEAEGGH--YVTLDGRPIRTPSGRVVVVPVRELAEAVAAEWG-AQGETIDP 86

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQ-DLVFCRAPADNDLTSGVHERQVQKID 212
             MPL + A + ++ V + R + +   M ++ Q DL+F RA        G+ ER+    D
Sbjct: 87  ASMPLTRFANSVVQSV-VDRVEDVRADMARYLQSDLLFYRA----GHPEGLVEREAAHWD 141

Query: 213 PLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVI 272
           P+L W     G   ++        Q D  ++    ++  T  + +AA   +     S ++
Sbjct: 142 PVLDWARDSLGAHFILSEGIMHVTQPDAAVRAAREVL-PTGPWAVAAAHVVTTVTGSALL 200

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVE 305
           A+ +  G    ++      ++ED  +++WG  E
Sbjct: 201 ALALTHGVRDADQVWAAANVDEDWNIEQWGADE 233


>gi|157125234|ref|XP_001654255.1| hypothetical protein AaeL_AAEL010141 [Aedes aegypti]
 gi|108873688|gb|EAT37913.1| AAEL010141-PA [Aedes aegypti]
          Length = 269

 Score = 87.8 bits (216), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 118/249 (47%), Gaps = 26/249 (10%)

Query: 94  KRFYEKVSTREADDGNG-WTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIR 152
           KRFY +     +   NG + + LD R LKTP   P  + +  LA AI  EWD Q+ D I 
Sbjct: 28  KRFYRQTGIITS---NGKFEITLDQRKLKTPKGAPFFVESEPLAIAIATEWDAQK-DVID 83

Query: 153 PFMMPLMKLACTALER-VPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKI 211
              M L  L+ T ++    L +  I+ +L+   + D +  ++  D  L     E QV + 
Sbjct: 84  RSRMHLTALSSTVIDNPNNLQKADIVNYLVNYASTDAILFQSNEDKRL----KELQVVEW 139

Query: 212 DPLLKWVESEFGFK-----PVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAA 266
           +P+++W    +  +      +   SF  G        T  N+ +    Y  AA+  I  A
Sbjct: 140 NPVIEWFNKRYDVQLEATDALEVPSFAPG--------TAMNISRYLSSYNEAALHGIMYA 191

Query: 267 AHSL---VIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSAT 323
             +L   ++        + +E+A+ L RLEE+ Q+  WG VE  HD+++ DL+ ++S+A 
Sbjct: 192 VDTLKSVILTCACVDRFIAVEKAVLLSRLEEEFQLGHWGRVEWAHDVNMLDLQARLSAAI 251

Query: 324 VFLGLSRRN 332
           +F+  +  N
Sbjct: 252 LFVYFNSSN 260


>gi|393722165|ref|ZP_10342092.1| ATP12 ATPase [Sphingomonas sp. PAMC 26605]
          Length = 228

 Score = 87.8 bits (216), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 97/217 (44%), Gaps = 13/217 (5%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRF+  V+  E        V LD + ++TP + PL LPT  LA+A+ AEW   + + I P
Sbjct: 2   KRFWTTVTLDETR-----AVFLDGKPVRTPGRAPLALPTDALAEAVAAEWRAVEGE-IDP 55

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MPL  LA  A++R+        + L      DL+  RA +  DL +    RQ    DP
Sbjct: 56  RAMPLTGLANAAIDRISPDPALFAQGLAAYGESDLLCYRADSPEDLVA----RQALAWDP 111

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           LL W    +     V +      Q    +  + + +     YELAA+  +     SL+ A
Sbjct: 112 LLDWARQRYDVHIEVATGILHRAQPALTLARLGDAIAARGAYELAALSPVVTIGGSLIAA 171

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWG---LVEGG 307
           + +       E+  + + L+ED Q  +WG   L E G
Sbjct: 172 LALTEQAATPEQIWDAVTLDEDYQAQRWGRDPLAEAG 208


>gi|194760887|ref|XP_001962664.1| GF14321 [Drosophila ananassae]
 gi|190616361|gb|EDV31885.1| GF14321 [Drosophila ananassae]
          Length = 263

 Score = 87.8 bits (216), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 67/247 (27%), Positives = 118/247 (47%), Gaps = 18/247 (7%)

Query: 89  GSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQT 148
           G+   KRFY+K S   +D   G+ V+LD+R LKTP   P  + +  LA A+  E+D Q+ 
Sbjct: 17  GTTPPKRFYKKTSVLSSD--GGYEVVLDHRKLKTPKGTPFTVRSEPLAIAVATEFDAQK- 73

Query: 149 DGIRPFMMPLMKLACTALER-VPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQ 207
           + I    M L  L  TA++    L +  ++ +L+     D V  +     D    + E Q
Sbjct: 74  EHIERSRMHLSALCFTAIDNPNNLNKLDMVNYLLNFIPTDTVLFQY----DDEKALQELQ 129

Query: 208 VQKIDPLLKWVESEF--GFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAA 265
             + DP++ W    F    +  +  +     +ED +      + K    Y L  +     
Sbjct: 130 QNEWDPVIDWFNQRFEVNLQKTMNITPPQVSEEDTI-----KIAKHFQSYSLETLHGFVF 184

Query: 266 AA---HSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSA 322
           A     S+++A  +    L +E+A+ L RLEE+ Q+  WG VE  HD+   +L+ ++++A
Sbjct: 185 AVDTLKSIILACAVIEQMLPVEKAVALARLEEEYQLKFWGRVEWAHDLSQQELQARLAAA 244

Query: 323 TVFLGLS 329
            +++ L+
Sbjct: 245 VLYVHLN 251


>gi|426238917|ref|XP_004013383.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor 2
           [Ovis aries]
          Length = 341

 Score = 87.8 bits (216), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 103/209 (49%), Gaps = 10/209 (4%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           K+FY+ VS  + +   G+ + LD+R L+TP  +   +P+  LA A+  EWD QQ D I+ 
Sbjct: 47  KKFYQNVSISQGE--GGFEINLDHRKLRTPQGKLFTVPSEALAIAVATEWDSQQ-DTIKM 103

Query: 154 FMMPLMKLACTALERVPLTRPK--IIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKI 211
           + M L  L  T+L+  P  R K  +I   +K  + D V  R      L     E Q  + 
Sbjct: 104 YTMHLTTLCNTSLDN-PTQRDKDQLIRAAVKFLDTDTVCYRVEEPETLV----ELQRNEW 158

Query: 212 DPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLV 271
           DP++ W E  +G +    +S  G        + + + +   + + L  I+ +     SLV
Sbjct: 159 DPVISWAERRYGVEIGSSTSITGPSIPARTREVLVSHLASYNMWALQGIEFVVTQLKSLV 218

Query: 272 IAIGIFRGKLQIEEAIELIRLEEDLQVDK 300
           + +G+    L +E+A+ L RLEE+ QV +
Sbjct: 219 LTLGLMDLHLTVEQAVLLSRLEEEYQVRR 247


>gi|328863873|gb|EGG12972.1| hypothetical protein MELLADRAFT_32252 [Melampsora larici-populina
           98AG31]
          Length = 259

 Score = 87.8 bits (216), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 63/237 (26%), Positives = 115/237 (48%), Gaps = 10/237 (4%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLP--TLGLAKAIGAEWDYQQTDGI 151
           +RF++ V    ++DGN + + LD R L TPS   L +P   + LA  +  EW  +Q   +
Sbjct: 28  QRFWKTVDIHPSEDGN-FHIRLDQRKLVTPSGNQLVIPRSKIALAVLVAREW-AEQRKIL 85

Query: 152 RPFMMPLMKLACTALERVPLT-RPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQK 210
           +   +PL  L   +++ + +  R +II+ L+   + D V         L     + Q + 
Sbjct: 86  KQHSLPLTSLVSRSIDGMKVEDRDEIIDSLLNYLDTDTVCFFEEKPQRLV----DLQDKH 141

Query: 211 IDPLLKWVESEFGFK-PVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHS 269
             PL++W+   +     + + S    KQ     + + +++   D  +LA  +       S
Sbjct: 142 WKPLIEWISQTYSVNLKIHHDSILFAKQSPATKEALRSVVMHFDRLKLAGFERAVHVTKS 201

Query: 270 LVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFL 326
            VIA+ +  GKL ++EA +  R+E   Q+ +WG VE  HD+D  ++R+++ S T  L
Sbjct: 202 FVIALALVEGKLTVDEASDASRVEVLSQIARWGEVEDTHDVDFQEIRMKLGSVTCAL 258


>gi|407778991|ref|ZP_11126251.1| ATP12 ATPase [Nitratireductor pacificus pht-3B]
 gi|407299275|gb|EKF18407.1| ATP12 ATPase [Nitratireductor pacificus pht-3B]
          Length = 261

 Score = 87.8 bits (216), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 104/210 (49%), Gaps = 8/210 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY   S  E  +G+ +TV+LD R ++TP    + LPT   A+ +  E+   Q + I P
Sbjct: 33  KRFYGAASVGE--EGDAFTVLLDGRMVRTPGAATVLLPTRVAAELVANEY-AGQGEVIDP 89

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP+ +L  TAL+ V      ++E +++  + DL+  RAP+   L +    RQ +  DP
Sbjct: 90  ATMPVTRLVNTALDGVAHHAQPVLEDVLRYASSDLLCYRAPSPESLVA----RQAELWDP 145

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVE-NLMKKTDDYELAAIDAIAAAAHSLVI 272
           +L W +   G   V+       +Q    I+ V  +L +++    LAA+  + A   SL++
Sbjct: 146 VLDWAQQAMGAHFVLAEGIVHVEQPRAAIQAVSAHLRQRSQPLRLAALHVMTALTGSLLL 205

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           A+ +    +   +A     ++ED    +WG
Sbjct: 206 ALAVEADAISAADAWSAAHVDEDWNRAQWG 235


>gi|357028777|ref|ZP_09090802.1| ATP12 ATPase [Mesorhizobium amorphae CCNWGS0123]
 gi|355537477|gb|EHH06733.1| ATP12 ATPase [Mesorhizobium amorphae CCNWGS0123]
          Length = 263

 Score = 87.4 bits (215), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 106/210 (50%), Gaps = 8/210 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+ VS    +DG  + V LD + ++TP K  L LPT   A  +  E+D Q  + I P
Sbjct: 33  KRFYKAVSVAPVEDG--FAVHLDGKPVRTPGKAQLVLPTEKAAALVAGEFDAQ-GETIDP 89

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP+M+L  TA++ V      ++E +++  + DL+  RA    D   G+ +RQ    DP
Sbjct: 90  VSMPVMRLVNTAIDGVASDPQAVLEDILRFASSDLLCYRA----DAPQGLVDRQNALWDP 145

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVE-NLMKKTDDYELAAIDAIAAAAHSLVI 272
           ++ W  +  G +  +       +Q    I  +  +L ++ +   LAAI  + +   S ++
Sbjct: 146 VIDWARTALGARFNLAEGIIHVEQPRETIAVLGVHLAQRKEPLRLAAIHVMTSLTGSALL 205

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           A+ +  G+L  E A     ++ED Q++ WG
Sbjct: 206 ALAVDFGELDGEAAWAAGHVDEDWQIEHWG 235


>gi|399067136|ref|ZP_10748779.1| chaperone required for the assembly of F1-ATPase [Novosphingobium
           sp. AP12]
 gi|398027295|gb|EJL20851.1| chaperone required for the assembly of F1-ATPase [Novosphingobium
           sp. AP12]
          Length = 230

 Score = 87.4 bits (215), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 66/224 (29%), Positives = 102/224 (45%), Gaps = 12/224 (5%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY++  T + +   GW  +LD R ++T   R   +PT  LA  + AEW  Q  + I P
Sbjct: 2   KRFYKETGTEQVE--GGWRAVLDGRAIRTAGGRQQVVPTQALASTLAAEWAVQ-GEIIDP 58

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
                  LA  A++ +   R  +I  L+     D +  RA  D  L    ++RQ +  +P
Sbjct: 59  ASFHFRDLADFAIDAIAPDRHTVIAELVPYAETDTLCYRADPDEAL----YKRQAEVWEP 114

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           LL+  E   G +    S      Q D  +  +   ++   D+ELAA+  +++ + SLVIA
Sbjct: 115 LLRAFEERLGVRFTRISGIMHRPQPDETLARLRGELEACSDFELAALKMLSSLSASLVIA 174

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRV 317
           +   R     +       LE D QV+ W     G D + ADLR 
Sbjct: 175 LEAIRPGADADTLWRAAELEADWQVELW-----GEDWEAADLRA 213


>gi|67904150|ref|XP_682331.1| hypothetical protein AN9062.2 [Aspergillus nidulans FGSC A4]
 gi|40742705|gb|EAA61895.1| hypothetical protein AN9062.2 [Aspergillus nidulans FGSC A4]
          Length = 366

 Score = 87.4 bits (215), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 73/285 (25%), Positives = 126/285 (44%), Gaps = 50/285 (17%)

Query: 90  SIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLG--LAKAIGAEWDYQQ 147
           +++ KRF++ V  ++ D G+ + V+LD R ++TPSK  L +P+    LA+AI  EWD   
Sbjct: 82  TVLKKRFWKDVDVKQKDGGD-YQVLLDKRPVRTPSKSVLSIPSTKQHLAQAIALEWDVMN 140

Query: 148 T--DGIRPFMMPLMKLACTA----------------LERVPLTRPKIIEHLMKKFNQDLV 189
                ++   +PL  L   A                +ERV   R +I++  M+    D +
Sbjct: 141 AAQQALKNHTIPLTSLTARAADIAQEDAAGAGAGAGVERV--IRTQIVKTAMRYLETDTL 198

Query: 190 FCRAPADNDLTSG--------VHERQVQKIDPLLKWVESE----FGFKPVV-YSSFFGGK 236
            C  P  +D            + E Q++    ++ ++ ++        PV+  +S F   
Sbjct: 199 LCWVPEQDDAVKDEETQQQETLREAQMRVAKDVIAFLSTKVWPGIDIVPVLDGNSIFPAS 258

Query: 237 QEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIF--------------RGKLQ 282
           Q       +   ++  + Y+LA ++    A+ SL++A+ +               R +  
Sbjct: 259 QSQATKDIIRQWVEGLEAYDLAGLERGILASKSLLVAVRLVTEWSENFCQLQQLSRKRFG 318

Query: 283 IEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLG 327
           IEEA E   LE   Q D WG VE  HD+D  DL+ Q+ S  V + 
Sbjct: 319 IEEAAEASSLEVRWQTDMWGEVEDTHDVDKEDLKRQLGSVIVLVA 363


>gi|358374511|dbj|GAA91102.1| oxysterol binding protein [Aspergillus kawachii IFO 4308]
          Length = 1619

 Score = 87.4 bits (215), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 121/277 (43%), Gaps = 42/277 (15%)

Query: 90  SIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLG--LAKAIGAEWDYQQ 147
           S++ KRF++ V  ++  DG+ + V+LD R ++TPSK  L +P+    LA AI  EWD   
Sbjct: 83  SVLKKRFWKNVDVKQKPDGD-YQVLLDTRPIRTPSKDVLSIPSTKPYLAHAIALEWDVMT 141

Query: 148 T--DGIRPFMMPLMKLACTALERVP-------LTRPKIIEHLMKKFNQDLVFCRAP---- 194
           T    ++  ++PL  L   A +           TR +I++  M+    D + C  P    
Sbjct: 142 TAQQALKNHLIPLTSLTARAADIAAEDARGETTTRDQILKTAMRYLETDTLLCWVPEQNA 201

Query: 195 -------ADNDLTSGVHERQVQKIDPLLKWVESEF----GFKPVVYS-SFFGGKQEDGLI 242
                  AD      + E Q++     + ++ ++       +P++ + S     Q     
Sbjct: 202 YAADEVDADGKKPESLREAQIRVAQDTIAFLSTKVWPGVDIQPILDTDSILPASQPQATK 261

Query: 243 KTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIF--------------RGKLQIEEAIE 288
             +   +     Y+LA ++    AA SL+IA+ +               R +  IEEA E
Sbjct: 262 DIILQWISGLQAYDLAGLERGILAAKSLLIAVRLVAEWSETFREVQRPGRERFGIEEAAE 321

Query: 289 LIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVF 325
              LE   Q D WG VE  HD+D  DL+ Q+ S  V 
Sbjct: 322 ASSLEVRWQTDMWGEVEDTHDVDKEDLKRQLGSVIVL 358


>gi|259485527|tpe|CBF82624.1| TPA: mitochondrial molecular chaperone (Atp12), putative
           (AFU_orthologue; AFUA_7G02490) [Aspergillus nidulans
           FGSC A4]
          Length = 369

 Score = 87.4 bits (215), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 73/285 (25%), Positives = 126/285 (44%), Gaps = 50/285 (17%)

Query: 90  SIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLG--LAKAIGAEWDYQQ 147
           +++ KRF++ V  ++ D G+ + V+LD R ++TPSK  L +P+    LA+AI  EWD   
Sbjct: 85  TVLKKRFWKDVDVKQKDGGD-YQVLLDKRPVRTPSKSVLSIPSTKQHLAQAIALEWDVMN 143

Query: 148 T--DGIRPFMMPLMKLACTA----------------LERVPLTRPKIIEHLMKKFNQDLV 189
                ++   +PL  L   A                +ERV   R +I++  M+    D +
Sbjct: 144 AAQQALKNHTIPLTSLTARAADIAQEDAAGAGAGAGVERV--IRTQIVKTAMRYLETDTL 201

Query: 190 FCRAPADNDLTSG--------VHERQVQKIDPLLKWVESE----FGFKPVV-YSSFFGGK 236
            C  P  +D            + E Q++    ++ ++ ++        PV+  +S F   
Sbjct: 202 LCWVPEQDDAVKDEETQQQETLREAQMRVAKDVIAFLSTKVWPGIDIVPVLDGNSIFPAS 261

Query: 237 QEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIF--------------RGKLQ 282
           Q       +   ++  + Y+LA ++    A+ SL++A+ +               R +  
Sbjct: 262 QSQATKDIIRQWVEGLEAYDLAGLERGILASKSLLVAVRLVTEWSENFCQLQQLSRKRFG 321

Query: 283 IEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLG 327
           IEEA E   LE   Q D WG VE  HD+D  DL+ Q+ S  V + 
Sbjct: 322 IEEAAEASSLEVRWQTDMWGEVEDTHDVDKEDLKRQLGSVIVLVA 366


>gi|158430644|pdb|2R6I|A Chain A, Crystal Structure Of Atu1473 Protein, A Putative Chaperone
           From Agrobacterium Tumefaciens
 gi|158430645|pdb|2R6I|B Chain B, Crystal Structure Of Atu1473 Protein, A Putative Chaperone
           From Agrobacterium Tumefaciens
          Length = 284

 Score = 87.4 bits (215), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 124/248 (50%), Gaps = 13/248 (5%)

Query: 61  ESIYIKGRKQETASSSSSSVTMPMSFMTGSI-----VGKRFYEKVSTREADDGNGWTVML 115
           E++Y +G + +  +  S  ++ P   +   I     + KRFY+ V+  + ++G G+T++L
Sbjct: 15  ENLYFQGXR-DLLNDLSEGLSHPDPILRAQIQXQKPLPKRFYKDVTVADVEEG-GFTILL 72

Query: 116 DYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRPFMMPLMKLACTALERVPLTRPK 175
           D + L+TP+K+PL  P+  LA  +  EWD Q+ + + P + P+ +   TA++ +      
Sbjct: 73  DGKPLRTPAKKPLVAPSRALADLLRDEWDAQK-EVVNPVVXPVSRHVNTAIDGIASDTQA 131

Query: 176 IIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDPLLKWVESEFGFKPVVYSSFFGG 235
           + E +++  + DL+  RA     L +    RQ    DP+L W  +  G + ++       
Sbjct: 132 VFEDILRFSSSDLLCYRAGDPEALVA----RQTDYWDPVLDWATNVLGARFILVEGVXHR 187

Query: 236 KQEDGLIKTVENLMKKTDD-YELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIRLEE 294
            Q    I      +KK D    LAA+    +   S ++A+ +  G+L +EEA  L  L+E
Sbjct: 188 DQPREAIAAFAVTLKKYDTPIALAALHTXTSLTGSAILALALAEGELTLEEAWALAHLDE 247

Query: 295 DLQVDKWG 302
           D   ++WG
Sbjct: 248 DWTAEQWG 255


>gi|338707760|ref|YP_004661961.1| ATP12 ATPase [Zymomonas mobilis subsp. pomaceae ATCC 29192]
 gi|336294564|gb|AEI37671.1| ATP12 ATPase [Zymomonas mobilis subsp. pomaceae ATCC 29192]
          Length = 243

 Score = 87.4 bits (215), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 101/209 (48%), Gaps = 7/209 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY++ S  +A    G+ + LD R + TP++ PL LP+  LA+ +  EW   QT  I P
Sbjct: 4   KRFYKEASVEKA--KLGFALKLDERQVMTPARNPLILPSEPLAEEVAEEW-RAQTHEIDP 60

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP+   A  A++ VP      I  + +    D+   RA    D    + +R+ +  DP
Sbjct: 61  AAMPMTGYANAAIDLVPKNYDDFILGIRQFAESDVTCYRA----DTPQNLAQREAELWDP 116

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           LL+W E  F             +Q +  +  +   +   +++E+AA+  +   + SLVI 
Sbjct: 117 LLEWAERRFDIHFHRIVGIIHKQQPETTLNRIGAAISDFNNFEVAALSQMTMISGSLVIP 176

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           + +   ++  EEA +   +++  Q ++WG
Sbjct: 177 LAVLEKEISPEEAFDAAHIDQIWQTEQWG 205


>gi|114771238|ref|ZP_01448658.1| hypothetical protein OM2255_07775 [Rhodobacterales bacterium
           HTCC2255]
 gi|114548163|gb|EAU51050.1| hypothetical protein OM2255_07775 [Rhodobacterales bacterium
           HTCC2255]
          Length = 238

 Score = 87.4 bits (215), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 103/210 (49%), Gaps = 7/210 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRF++    R  D  +G+ V LD R ++TPSK  LK+    +A  I  EW   Q + + P
Sbjct: 7   KRFWK--DARVVDLNDGYVVELDGRVIRTPSKALLKVDFRKIADQIAFEW-MAQEEIVNP 63

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP  ++A + ++++ + +  +IE L      DL+  RA +   L S    +Q +  +P
Sbjct: 64  ATMPNTRMANSVIDKIMVNKEAVIEMLSDYSGSDLLCYRAVSPQGLIS----QQNEIWNP 119

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           +L+W +  F    V  S     KQ +  +    N +KK + Y+LA +  +   + S VIA
Sbjct: 120 ILEWSKDVFLAPMVTTSGVMHIKQNNNSMNIYRNELKKMNLYQLAGMHDLITISGSFVIA 179

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWGL 303
           + +    L I +A     ++E  Q  +WG+
Sbjct: 180 MALISNHLNISDAWHAATVDERWQEMQWGI 209


>gi|322786574|gb|EFZ12969.1| hypothetical protein SINV_00497 [Solenopsis invicta]
          Length = 249

 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/241 (28%), Positives = 115/241 (47%), Gaps = 16/241 (6%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY +  T     G+ + V LD R LKTP  R  ++ +  LA A+ AEWD Q+ D I  
Sbjct: 5   KRFYRR--TNIISSGDKFEVTLDQRKLKTPQGRIFEVNSKSLALAVAAEWDAQK-DIIDR 61

Query: 154 FMMPLMKLACTALERVPLTRPKI--IEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKI 211
             M L  L  T L+  P    KI  + H++     D +   +   ++L    +  QV+K 
Sbjct: 62  GSMHLTSLCNTVLDN-PHNHSKIDLVNHIVNCLEMDTILFYSSEVDEL----YRLQVEKW 116

Query: 212 DPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAA---H 268
           +P++ W    +    V  +S    +     I+T   L ++   +   +I  +  A     
Sbjct: 117 EPIVHWFCEHYD---VDIASTQSIQMPTVPIETKAALTRQLLSHNFNSIYGLVYAVDGLK 173

Query: 269 SLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGL 328
           S+++ +      + I EA+ L RLEE+ Q+  WG VE  H+    DL+ ++S+A +F+ L
Sbjct: 174 SVILTLATVARIINISEAVNLSRLEEEYQISHWGNVEWHHEYSKQDLQARLSAAMLFVYL 233

Query: 329 S 329
           +
Sbjct: 234 N 234


>gi|259416378|ref|ZP_05740298.1| ATP12 ATPase [Silicibacter sp. TrichCH4B]
 gi|259347817|gb|EEW59594.1| ATP12 ATPase [Silicibacter sp. TrichCH4B]
          Length = 234

 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 108/209 (51%), Gaps = 7/209 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRF+++VS  E  DG G+ V LD R +KTP+K  L +PT  LA+AI AEWD Q+ + I P
Sbjct: 7   KRFWKEVSVEE--DGAGFAVALDGRRVKTPAKTALVVPTRALAEAIAAEWDAQE-EQIAP 63

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP  + A  A+++V +   ++ + L +  + DL+  RA +   L +    RQ +  D 
Sbjct: 64  LSMPNTRSANAAIDKVAVQFAEVADMLAEYGDSDLLCYRAESPEGLVA----RQSESWDA 119

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
            L+W E+  G + +  +      Q+   ++ +   + +   ++LAA   +     SL++ 
Sbjct: 120 ALEWAEAALGARLLPRAGILHAPQDGAALEVLRKRVHQMTPFQLAAFHDLVGLTGSLILG 179

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
                    ++E  E+ R++E  Q + WG
Sbjct: 180 FATAANWRSLDEIWEISRIDERWQEELWG 208


>gi|158299506|ref|XP_319622.4| AGAP008876-PA [Anopheles gambiae str. PEST]
 gi|157013551|gb|EAA14894.5| AGAP008876-PA [Anopheles gambiae str. PEST]
          Length = 270

 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 110/244 (45%), Gaps = 16/244 (6%)

Query: 94  KRFYEKVSTREADDGNG-WTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIR 152
           KRFY       +   NG + + LD R LKTP   P  + +  LA AI  EWD Q+ D I 
Sbjct: 29  KRFYRNTGVISS---NGRFEITLDSRKLKTPRGLPFYVESEPLAVAIAMEWDAQK-DVID 84

Query: 153 PFMMPLMKLACTALER-VPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKI 211
              M L  L+ T ++    L +  ++ +L+   N D V   +  + +L     + Q Q+ 
Sbjct: 85  RSSMHLTALSSTVIDNPNSLQKHDMVNYLVNYINTDTVLFHSSEEPELK----KLQSQEW 140

Query: 212 DPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAA---H 268
            P++ W    +        S      E G+     NL +    Y  AA+     A     
Sbjct: 141 TPIVDWCNKRYEINLASTDSLVVPTFEPGM---AMNLSRYFSSYNTAALHGFVFAVDTIK 197

Query: 269 SLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGL 328
           S+++ +      + IE+A++L RLEE+ Q   WG VE  HDI   D + ++S+A +++  
Sbjct: 198 SIILTMACADRYISIEKAVQLARLEEEFQQGHWGKVEWAHDIQRLDSQARLSAAVLYIYF 257

Query: 329 SRRN 332
           +  N
Sbjct: 258 NTSN 261


>gi|403420523|emb|CCM07223.1| predicted protein [Fibroporia radiculosa]
          Length = 547

 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 62/237 (26%), Positives = 114/237 (48%), Gaps = 11/237 (4%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLG--LAKAIGAEWDYQQTDGI 151
           KRF++ V     +DG  + V LD R L+TPS + L LP     +A  I +EW+ Q+T  +
Sbjct: 315 KRFWKTVGIDAREDG--FVVTLDKRPLRTPSGKHLILPRNKRLVATLIASEWENQET-LL 371

Query: 152 RPFMMPLMKLACTALERVPL--TRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQ 209
           +P  +P+  +A  A++      TR ++   L+K F  D +         L +     Q  
Sbjct: 372 KPHTLPMTSIASRAIDAFSDEDTRREVRAQLLKYFETDTICFHHSEPAALVA----LQNA 427

Query: 210 KIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHS 269
              P+L W  + +        S   G      ++ ++ +M   D +++AA++     + S
Sbjct: 428 NWKPILDWTRTTYNVDISTSDSLLLGPHPPETVQKLDEVMTNFDHWQMAAMERATYTSKS 487

Query: 270 LVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFL 326
            +IA+ +   ++ +E+A +    E + Q+++WG VE  HD+D  D+R  + SA   +
Sbjct: 488 FLIALALVMRRISVEQAAQAAHAEVNSQIERWGEVEDSHDVDYHDMRRHLGSAACLI 544


>gi|294675891|ref|YP_003576506.1| ATP12 chaperone protein family [Rhodobacter capsulatus SB 1003]
 gi|294474711|gb|ADE84099.1| ATP12 chaperone protein family [Rhodobacter capsulatus SB 1003]
          Length = 237

 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 67/210 (31%), Positives = 107/210 (50%), Gaps = 7/210 (3%)

Query: 93  GKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIR 152
            KRF+ K +T E  +G G+TV LD R +KTP+K  L LPT  +A+A+ AEW  Q    I 
Sbjct: 6   AKRFW-KSATVEPCEG-GFTVKLDGRAVKTPAKAALVLPTQAMAEAVAAEWQAQGAK-ID 62

Query: 153 PFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKID 212
           P  MP+ + A  AL++V   + ++   +      DL+  RA    +L +    RQ    D
Sbjct: 63  PTTMPVTRSANAALDKVRAQQAEVAALIAAYGETDLLCYRAKMPEELVA----RQAAAWD 118

Query: 213 PLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVI 272
             L W +S +  +  V +      Q +     + + +   D +ELAA+  +     SLV+
Sbjct: 119 RWLDWADSRYQARLTVTAGVLPVAQPEQAQAALASRVAACDIWELAALHDLVGITGSLVL 178

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
            + +  G++  EEA  L R++ED Q+ +WG
Sbjct: 179 GLAVAEGEIAAEEAWRLSRIDEDWQIAQWG 208


>gi|319899066|ref|YP_004159159.1| ATP12 chaperone family protein [Bartonella clarridgeiae 73]
 gi|319403030|emb|CBI76585.1| ATP12 chaperone family protein [Bartonella clarridgeiae 73]
          Length = 264

 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 105/210 (50%), Gaps = 8/210 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFYEKV     ++   ++++LD R LKTP+KR   +P   LA  +  E+  Q+ + I P
Sbjct: 34  KRFYEKVDVICKEEK--FSILLDGRQLKTPAKRDFFVPIEKLAVLVVREFTAQE-EVIDP 90

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP+ +L  T ++ +      I E L++    D++F RA    +L     +RQ +K D 
Sbjct: 91  AKMPITRLVNTVIDGIIDNMQIIFEDLLRFVACDMIFYRAQTPKELV----KRQSEKWDF 146

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDD-YELAAIDAIAAAAHSLVI 272
           LL W E + G    +       +Q    I+ V N ++K    Y LAA+ A+     S +I
Sbjct: 147 LLDWAEEKLGAHFNLAEGLMHIEQPPESIQAVSNYLRKIGSPYALAALHAMTTLTGSALI 206

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           A  +   ++  ++A  +  L+ED  ++ WG
Sbjct: 207 AFAVTEKEISTDDAWTIAHLDEDWTMEHWG 236


>gi|359407954|ref|ZP_09200427.1| chaperone required for the assembly of F1-ATPase [SAR116 cluster
           alpha proteobacterium HIMB100]
 gi|356677020|gb|EHI49368.1| chaperone required for the assembly of F1-ATPase [SAR116 cluster
           alpha proteobacterium HIMB100]
          Length = 232

 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 98/209 (46%), Gaps = 7/209 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+ V+ +++D   G+ + LD R +++P K  + +PT  LA+A+ AEW     D I+P
Sbjct: 2   KRFYKDVTVKKSD--TGYQICLDGRPVRSPEKAIITVPTPELAEAVQAEWQAVDED-IQP 58

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MPL  +A T  +RV   R  +   L    + D++  R+  D DL +    RQ +K DP
Sbjct: 59  EDMPLYSMAVTVTDRVTPQRQTLANELAAYLHDDVLRYRSEEDLDLAA----RQTEKWDP 114

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
            L W     G K  V S       +  + + + + +    D     +   A  + S+V+ 
Sbjct: 115 WLSWAAEACGLKLPVTSGLMPLTADKAVEQIILDRLNPLGDARFGCLYRAATLSGSVVLG 174

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           +    G +  ++  E   L+E  Q   WG
Sbjct: 175 LAFEEGVVNADDVFETAFLDELYQNSLWG 203


>gi|440802969|gb|ELR23883.1| ATP synthase mitochondrial F1 complex assembly factor 2
           [Acanthamoeba castellanii str. Neff]
          Length = 155

 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 73/133 (54%)

Query: 194 PADNDLTSGVHERQVQKIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTD 253
           P D +    ++++Q  ++ P LKW  S F  + +++ S     Q +  I  +  L+  T 
Sbjct: 10  PDDREKEQVLYDKQQAQLRPFLKWFSSFFNMELMLHFSVIPEAQPEETINGLRLLLHNTT 69

Query: 254 DYELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIA 313
           D+EL  +D + +   SLV+ + +++G   +++ I   R+EED  + +WG  EG HD+D  
Sbjct: 70  DWELGCLDTLVSRTKSLVLGLALWKGPFSVDQCIAASRIEEDHNIAEWGECEGAHDLDKV 129

Query: 314 DLRVQISSATVFL 326
           D+   +++AT FL
Sbjct: 130 DIYKHVAAATAFL 142


>gi|312113466|ref|YP_004011062.1| ATP12 ATPase [Rhodomicrobium vannielii ATCC 17100]
 gi|311218595|gb|ADP69963.1| ATP12 ATPase [Rhodomicrobium vannielii ATCC 17100]
          Length = 237

 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 12/221 (5%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+  +  E D    + + LD RT+KTP+ R L +PT GLA AI  EW+ +Q + I P
Sbjct: 10  KRFYKDATVAEHD--GAFQIHLDGRTIKTPAGRALAVPTRGLADAIAGEWN-EQGETIAP 66

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             +   +LA +A + V     ++++ ++     DL+  RAP      + +  RQ +  +P
Sbjct: 67  HSLFFTRLANSAADAVAPREAEVVDEIVSFAASDLLCYRAP----FPAALATRQAEAWNP 122

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           +L ++  ++G    V        Q    ++ + N +     + LAA+  +     S ++A
Sbjct: 123 VLAFIREKYGATFEVAEGVGHVAQPPASLEAIRNAVAAYGPFRLAALHMMTTLTGSALLA 182

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIAD 314
           I    G L +        ++E  Q  +W     G D D A+
Sbjct: 183 IAHVDGFLDLAATWAAAHVDEAWQAAQW-----GQDFDAAE 218


>gi|399036577|ref|ZP_10733611.1| chaperone required for the assembly of F1-ATPase [Rhizobium sp.
           CF122]
 gi|398065905|gb|EJL57517.1| chaperone required for the assembly of F1-ATPase [Rhizobium sp.
           CF122]
          Length = 261

 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 104/210 (49%), Gaps = 8/210 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+ V+ RE D+G  +++ LD + ++TP+++ L + T  LA+ +  EW+  Q + I P
Sbjct: 31  KRFYKTVTIRELDEG--FSIELDGKAIRTPARKLLVVATKPLAELLVPEWE-AQAELIDP 87

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP+ +L  TA++ V      + + +++  + DL+  RA A  +L     ERQ +  DP
Sbjct: 88  STMPVTRLVNTAIDGVATDTQAVFDDILRFSSSDLLCYRADAPQELV----ERQKELWDP 143

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYE-LAAIDAIAAAAHSLVI 272
           +L W  +  G + ++        Q    I      +K+ D    LAA+  I     S ++
Sbjct: 144 VLDWAANSLGARFILIEGVMHHDQPPEAISAFSGALKRHDKATVLAALHTITTLTGSALL 203

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           A+      L  +    L  L+ED  ++ WG
Sbjct: 204 ALAFAERVLSAKNVWSLAHLDEDWTIEHWG 233


>gi|163760836|ref|ZP_02167915.1| hypothetical protein HPDFL43_06817 [Hoeflea phototrophica DFL-43]
 gi|162281880|gb|EDQ32172.1| hypothetical protein HPDFL43_06817 [Hoeflea phototrophica DFL-43]
          Length = 262

 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 108/210 (51%), Gaps = 8/210 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRF+ +   +    G G+ V LD + ++TPS+R L++P   LA+A+ AEW  Q+ + I P
Sbjct: 32  KRFFTEAGVKPGT-GGGFVVALDGKPVRTPSRRELEVPFEALAEAVAAEWSAQK-EHIDP 89

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
            +MPL ++  TA++ V   R  + E +++    D++  RA   + L +    R+ +  DP
Sbjct: 90  AVMPLTRMVNTAIDGVSTAREAVFEEILRYGGTDMLCYRAEGPDTLIA----REAEHWDP 145

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKK-TDDYELAAIDAIAAAAHSLVI 272
            L W   + G + V+       +Q    I+ +  LM++   D +L A+  I     SLV+
Sbjct: 146 YLDWAAQQ-GARLVLAEGIMHVEQPAESIRALATLMRRHASDLQLTALHTITTLTGSLVL 204

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           A+ +  G  + +E      ++ED  + +WG
Sbjct: 205 ALALAEGHAEADEIWLAAHVDEDFNISQWG 234


>gi|296114941|ref|ZP_06833587.1| putative ATP12 chaperone protein [Gluconacetobacter hansenii ATCC
           23769]
 gi|295978499|gb|EFG85231.1| putative ATP12 chaperone protein [Gluconacetobacter hansenii ATCC
           23769]
          Length = 259

 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 113/251 (45%), Gaps = 12/251 (4%)

Query: 89  GSIVGKRFYEKVSTRE---ADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDY 145
           G+   +RF++  +       D   G+TV LD R ++ P +  L +    LA A+  EW+ 
Sbjct: 14  GTAARRRFWDTATVAPQAGGDQAGGYTVHLDGRPVRLPGRTLLVVHADALAHALAGEWER 73

Query: 146 QQTDG----IRPFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTS 201
                      P  +PL ++A T +ER+   R   +  L++  N +L+  RA     L  
Sbjct: 74  AGGGAKGGLFTPEDLPLTRIAGTMIERIAPDREATVTALLQYANGELLCYRATHPATLC- 132

Query: 202 GVHERQVQKIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAID 261
              ERQ  +  P L W+   +G             Q  G +  + ++++  DD  LAA+ 
Sbjct: 133 ---ERQAAQWAPWLDWLRERYGITLCTTEGVMPITQTPGTLAALGDILRGYDDATLAALG 189

Query: 262 AIAAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISS 321
            +  A  SLV+ I +  G      A ++  L+E  Q++ WG  +   +  +A L  +++ 
Sbjct: 190 VMVPAMKSLVLGIAVVTGACDAARAAQVATLDERTQMEIWG-SDAQQEAMLATLGREVAE 248

Query: 322 ATVFLGLSRRN 332
           A+ FL L+R+ 
Sbjct: 249 ASTFLELARKG 259


>gi|409437484|ref|ZP_11264598.1| conserved hypothetical protein [Rhizobium mesoamericanum STM3625]
 gi|408750912|emb|CCM75756.1| conserved hypothetical protein [Rhizobium mesoamericanum STM3625]
          Length = 254

 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 113/236 (47%), Gaps = 8/236 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+ V+  + D+G  + + LD + ++TP+++ L + T  LA+ +  EW+  Q + I P
Sbjct: 24  KRFYKTVTVAKLDEG--FLIELDGKAIRTPARKLLVVATKPLAELVMGEWE-AQAEHIDP 80

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP+ +L  TA++ V      + E +++  + DL+  RA    D    + ERQ +  DP
Sbjct: 81  SAMPVTRLVNTAIDGVATDTQAVFEDILRFSSSDLLCYRA----DGPEALVERQKELWDP 136

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDY-ELAAIDAIAAAAHSLVI 272
           +L W  +  G + ++        Q    I    + +++ D+   LAA+  I     S ++
Sbjct: 137 VLDWAANALGARFILIEGVMHHDQPRDAISAFSSALRRHDNATALAALHTITTLTGSALL 196

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGL 328
           A+    G    +E   L  L+ED  ++ WG  E   +          ++A VFL L
Sbjct: 197 ALAFAEGVFPAKEVWSLAHLDEDWTIEHWGSDEEAEERRKKRFEDFKAAADVFLAL 252


>gi|312077338|ref|XP_003141260.1| hypothetical protein LOAG_05675 [Loa loa]
          Length = 270

 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/239 (26%), Positives = 113/239 (47%), Gaps = 17/239 (7%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFYE+           + + LD   L TP + P+K+ +  LA A+  EW+ Q+ D +R 
Sbjct: 21  KRFYEEARVVFKPMEEVYNIYLDKHNLVTPKRNPVKIYSEALALAVAEEWNMQK-DELRM 79

Query: 154 FMMPLMKLACTALER-VPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKID 212
            +M L  L  TA++  + L +  ++  +++  ++D V  R   +++L     E +    +
Sbjct: 80  DLMRLTGLIFTAIDNPMSLKKSDLLSQVLQFLDKDTVLYRLVENSNLL----ELEEANWN 135

Query: 213 PLLKWVESEFGF--KPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSL 270
           P+++WV  E+G   KP           ++     + N +      +L  +     A  S+
Sbjct: 136 PVVEWVNWEYGLSAKP-------KAVIDNNSRVRLANQLSNYSFLQLIGLQYATEALKSV 188

Query: 271 VIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADL--RVQISSATVFLG 327
            + +     +L + EA+EL  LE+  Q D WG VE  HDI+  +L  R+ + S  V LG
Sbjct: 189 FLTLATVSSRLHVNEAVELALLEQKYQSDIWGKVEWAHDIEREELISRLSVGSLLVHLG 247


>gi|389878458|ref|YP_006372023.1| ATP synthase [Tistrella mobilis KA081020-065]
 gi|388529242|gb|AFK54439.1| ATP synthase [Tistrella mobilis KA081020-065]
          Length = 245

 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/190 (28%), Positives = 86/190 (45%), Gaps = 5/190 (2%)

Query: 113 VMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRPFMMPLMKLACTALERVPLT 172
           V+LD R L+TP+K PL +P   LA+ I  EW  Q+T  I P  MP  KLA   ++RV   
Sbjct: 32  VLLDGRGLRTPAKAPLVVPGRALAQLIADEWAAQETH-IAPETMPATKLANVVIDRVVPH 90

Query: 173 RPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDPLLKWVESEFGFKPVVYSSF 232
           R +I   L      DLV  RA    +L +     Q +  DPL+ W  + +    V  +  
Sbjct: 91  RAQIAAELAGYIGTDLVCYRADNPKELAA----LQARHWDPLVDWARTRYDIHLVTTTGL 146

Query: 233 FGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIRL 292
               Q    ++ +   ++  D + LA +      A S+VI + +    +    A +    
Sbjct: 147 LAVDQPPATVERLTRAIEAADPWRLAVLHGAVTTAGSVVIGLALAEAGIDPATAYDAAFA 206

Query: 293 EEDLQVDKWG 302
           +E  Q+ +WG
Sbjct: 207 DEHFQIARWG 216


>gi|212546095|ref|XP_002153201.1| mitochondrial molecular chaperone (Atp12), putative [Talaromyces
           marneffei ATCC 18224]
 gi|210064721|gb|EEA18816.1| mitochondrial molecular chaperone (Atp12), putative [Talaromyces
           marneffei ATCC 18224]
          Length = 383

 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 80/304 (26%), Positives = 138/304 (45%), Gaps = 45/304 (14%)

Query: 71  ETASSSSSSVTMPMSFMTGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKL 130
           E+ +  S     P+S    S + KRF++ V  +E+ DG  + ++LD R +++P+K  L +
Sbjct: 82  ESQTRPSDRTATPVSQAKTSPLKKRFWKDVDVKESADG--YQILLDTRPVRSPTKTILTV 139

Query: 131 PT--LGLAKAIGAEWDYQQT--DGIRPFMMPLMKLACTALERV-------PLTRPKIIEH 179
           P+    LA+AI  EWD   +    ++  ++PL  L   A + V          R +I   
Sbjct: 140 PSNKRHLAEAISLEWDLLTSAQQALKQHLIPLTSLTTRAADIVREDELGQNRIRQEIART 199

Query: 180 LMKKFNQDLVFCRAPAD---NDLT--------SGVHERQV----QKIDPLLKWVESEFGF 224
            M+    D + C  P     N L+          + E+QV    + I+ L + +      
Sbjct: 200 AMRYLETDTLLCWVPEKEIHNPLSKTSLAPEEETLREKQVRVAREIINFLTRTIWPGVEI 259

Query: 225 KPVV-YSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGI------- 276
           KPV+  +S     Q++  ++T+ + +     YELA ++    A+ SL++A+ +       
Sbjct: 260 KPVLDENSIIPMSQDEKTLETIRSWISALPPYELAGLERGILASKSLLVAVRLVVEWSEH 319

Query: 277 FRG---------KLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLG 327
           F G         +  ++EA     LE   Q D+WG VE  HD+D  DLR Q+ S  + + 
Sbjct: 320 FSGLQETVQNVSRFGVDEAACASSLEVTHQTDQWGEVEDTHDVDREDLRRQLGSVILLVS 379

Query: 328 LSRR 331
             RR
Sbjct: 380 GDRR 383


>gi|195443388|ref|XP_002069399.1| GK18733 [Drosophila willistoni]
 gi|194165484|gb|EDW80385.1| GK18733 [Drosophila willistoni]
          Length = 278

 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 114/252 (45%), Gaps = 38/252 (15%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+K S    D  NG+ + LD+R LKTP      + +  LA A+  E+D Q+ + I  
Sbjct: 37  KRFYKKTSVLCTD--NGYEITLDHRKLKTPKGTLFTVKSEPLAIAVATEFDSQK-EHIER 93

Query: 154 FMMPLMKLACTALER-VPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKID 212
             M L  L  TAL+    L++  ++ +L+     D V  +   + DL    H     + D
Sbjct: 94  SRMHLSALCFTALDNPNNLSKLDMVNYLLNFIATDTVLFQYDDEQDLQDLQH----NEWD 149

Query: 213 PLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVE------------NLMKKTDDYELAAI 260
           PL+ W               F  + E  L KT+              + K    Y L  +
Sbjct: 150 PLIAW---------------FNQRFETNLQKTMNITPPLVTDEDKIKIAKHFQSYNLETL 194

Query: 261 DAIAAAA---HSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRV 317
                A     S+V+A  +   ++ +E+A+ L RLEE+ Q+  WG VE  HD+   +L+ 
Sbjct: 195 HGFIFAVDTLKSIVLACAVIEQQIPVEKAVALARLEEEYQLKFWGRVEWAHDLSQQELQA 254

Query: 318 QISSATVFLGLS 329
           ++++A +F+  +
Sbjct: 255 RLAAAVLFVHFN 266


>gi|119177617|ref|XP_001240562.1| hypothetical protein CIMG_07725 [Coccidioides immitis RS]
 gi|392867472|gb|EAS29294.2| mitochondrial molecular chaperone [Coccidioides immitis RS]
          Length = 369

 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 78/279 (27%), Positives = 122/279 (43%), Gaps = 43/279 (15%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLG--LAKAIGAEWD--YQQTD 149
           KRF++ V  +EA    G+ V+LD R ++TP+K  L +P     LA AI  EWD       
Sbjct: 93  KRFWKDVHVKEA--AEGYQVLLDSRPIRTPAKTILNIPRSKPHLAHAIALEWDQLVSAQQ 150

Query: 150 GIRPFMMPLMKLACTALERV-------PLTRPKIIEHLMKKFNQDLVFCRAPA----DND 198
            +R  ++PL  L   A + V          R +I+  LM+  + D +   AP     D D
Sbjct: 151 ALRHHLIPLTSLTARAEDIVQQDSRGESTIRNEIMRTLMRYLDTDTLLSWAPQKGPYDID 210

Query: 199 LTSGVHER-------QVQKIDPLLKWVES----EFGFKPVVYS-SFFGGKQEDGLIKTVE 246
            T G  E        Q++   P++ ++ +        KPV+   S     Q     + + 
Sbjct: 211 STEGAEEAPRSLRDLQIRTAQPIIGFLTTVVWPGIEIKPVLEEDSILPVSQPQMTKEVIR 270

Query: 247 NLMKKTDDYELAAIDAIAAAAHSLVIAIGIF--------------RGKLQIEEAIELIRL 292
             +     YELA ++    A+ SL+I + +               R    IE+A E+  L
Sbjct: 271 GWITGLPAYELAGLERAVLASKSLLIGVRLVVEWSEHFRDLQPGGRRTFGIEKAAEVSSL 330

Query: 293 EEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGLSRR 331
           E   Q ++WG VE  HD++  DLR Q+ SA + +   RR
Sbjct: 331 EVKWQTEQWGEVEDTHDVEKEDLRRQLGSAVLLVSGERR 369


>gi|300023020|ref|YP_003755631.1| ATP12 ATPase [Hyphomicrobium denitrificans ATCC 51888]
 gi|299524841|gb|ADJ23310.1| ATP12 ATPase [Hyphomicrobium denitrificans ATCC 51888]
          Length = 271

 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 8/211 (3%)

Query: 92  VGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGI 151
           + +RFY++ ST    D   + ++LD R +KTP KR L +PT  LA AI  EW   Q D I
Sbjct: 41  LARRFYKEAST---GDVAPFQILLDGRAVKTPKKRALAVPTKALALAIADEWQ-AQVDTI 96

Query: 152 RPFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKI 211
            P  MPL + A TA++ V  T   +   ++     DLV  RA   ++L +     Q +  
Sbjct: 97  DPSRMPLTRFANTAIDAVSETLDAVAADIVAYAGSDLVCYRAETPDELVA----LQSRDW 152

Query: 212 DPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLV 271
           +P++ W ++    +  V       +Q    +  V + +   D + L  +  +     S +
Sbjct: 153 NPIVAWADATLDARFRVVPGVVHVEQSSEALAAVGHALTPHDPFRLTGLHVLTTLTGSAL 212

Query: 272 IAIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           +A+ +    + ++ A     ++ED Q+  WG
Sbjct: 213 LALALESKAVTVDAAWNAAHVDEDYQISLWG 243


>gi|342184920|emb|CCC94402.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 498

 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/234 (29%), Positives = 112/234 (47%), Gaps = 13/234 (5%)

Query: 96  FYEKVSTREADD-GNGW-TVMLDYRTLKT-PSKRPLKLPTLGLAKAIGAEWDYQQTDGIR 152
           F+  V   + DD   GW TV++D R +K   S+  L +P+  +A A   E+  +Q D + 
Sbjct: 248 FWRDVDVGKLDDVREGWYTVLVDGRKVKAFESRGVLAIPSEAMAYACAREYA-EQKDYLN 306

Query: 153 PFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKID 212
             +MPL  L   AL  VP      I++LM  +  D ++ R+P        + E Q + ID
Sbjct: 307 KLLMPLTDLCSGALAVVPQMITPRIDYLMSFYQNDNMYFRSPL-------IAEEQDRNID 359

Query: 213 PLLKWVESEFGFK-PVVYSSFFGGKQEDGLIKTVENLMKKT-DDYELAAIDAIAAAAHSL 270
           P+ +W   EFG   P V          D   K  + L+  + + Y++ A+   A    SL
Sbjct: 360 PVSQWFSREFGVNVPRVVGIGHPQIPPDATFKVRDALLAMSMNPYQVVALCVAAQFTSSL 419

Query: 271 VIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATV 324
           ++ + +F   + +  A+ + R EE       G++EG HDI  AD+  ++ +ATV
Sbjct: 420 ILPLAMFHEVVDLPTALNINRAEESHNTRVEGMIEGYHDIREADVVTKLCAATV 473


>gi|340378325|ref|XP_003387678.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor
           2-like [Amphimedon queenslandica]
          Length = 257

 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/239 (26%), Positives = 113/239 (47%), Gaps = 12/239 (5%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY++ +  + + G  + V LD+R L+TP +R   +P+  LA A+  EW   QT  I+P
Sbjct: 28  KRFYKQATVYQTE-GGWFGVKLDHRNLRTPLRRVFSVPSESLAIAVCHEWK-SQTKFIQP 85

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
            +M L  L+ T ++R         + L+   + D +  R     DL     E Q ++ DP
Sbjct: 86  SLMHLTALSNTVIDRSD--NLNKTDELLAYLSTDTICYRVVEPLDLV----ELQEKEWDP 139

Query: 214 LLKWVESEFG--FKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLV 271
           ++KW    +    +P    +     +E  L  ++   +     +          +  SL+
Sbjct: 140 VIKWFNERYNCNIEPTSNLNVLSVTKELKL--SISEFIHSLGLWGTRGFSFALESTKSLI 197

Query: 272 IAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGLSR 330
           +   +F G+   +   +L RLE   Q+ KWG VE  H+I+  DL  ++S++ +F  L++
Sbjct: 198 LTCALFDGQFDSQTISDLSRLEVRHQISKWGSVEWQHEIEAQDLLSRLSASVLFHDLTK 256


>gi|158424143|ref|YP_001525435.1| hypothetical protein AZC_2519 [Azorhizobium caulinodans ORS 571]
 gi|158331032|dbj|BAF88517.1| conserved hypothetical protein [Azorhizobium caulinodans ORS 571]
          Length = 258

 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 7/209 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY++V+  E + G+   V LD RTL+TP+K  L +P+  LA A+  EW  Q  + I P
Sbjct: 29  KRFYKEVTVAEGEGGH--EVRLDGRTLRTPAKAKLAVPSAALAAALAEEWAAQGVE-IDP 85

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
           F MPL +L   AL+ V     ++ E +++    DL+  RA     L +    RQ    DP
Sbjct: 86  FTMPLTRLVNVALDGVARNPQEVKEEIVRYMGSDLLLYRAEGPEGLVA----RQATHWDP 141

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           +L W++     +  +       +Q   ++  V  L+   D   LAA+  + A   S  +A
Sbjct: 142 VLAWLDRAHDARFFLAEGIRHVEQPADMVARVAALVGTDDPLSLAALSTLTALTGSAFLA 201

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           + +  G L  + A     ++ED  +++WG
Sbjct: 202 VALANGVLDADAAWRAAHVDEDWTIERWG 230


>gi|390450952|ref|ZP_10236536.1| ATP12 ATPase [Nitratireductor aquibiodomus RA22]
 gi|389661714|gb|EIM73313.1| ATP12 ATPase [Nitratireductor aquibiodomus RA22]
          Length = 263

 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 111/238 (46%), Gaps = 9/238 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQ-QTDGIR 152
           KRFY+ VS    +DG G+ V LD + ++TP    ++LP    A  +  E  YQ Q + I 
Sbjct: 33  KRFYKDVSVTPEEDG-GFAVRLDGKPVRTPGASAVRLPNEATALLVAGE--YQAQGEHID 89

Query: 153 PFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKID 212
           P  MP+ +L  TA++ V +    ++E +++    DLV  RAP+   L +     Q +  D
Sbjct: 90  PASMPVTRLVNTAIDGVAVHAQAVLEDVLRYATGDLVCYRAPSPERLVT----LQAEAWD 145

Query: 213 PLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVEN-LMKKTDDYELAAIDAIAAAAHSLV 271
           P+L W +   G   V+       +Q    I  V   L +K + Y LA +  +     S +
Sbjct: 146 PVLDWAQQHMGAHFVLAEGVIHVEQPREAIAAVSAYLRQKNEPYRLACLHVMTTLMGSAL 205

Query: 272 IAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGLS 329
           +A+ +    L+ + A +   ++ED  +  WG          A  R  +S+AT+   L+
Sbjct: 206 LALAVEAKALEPQAAWKAAHVDEDWNISLWGEDSEAAQRRSARERDMMSAATLLSALN 263


>gi|110633999|ref|YP_674207.1| ATP12 ATPase [Chelativorans sp. BNC1]
 gi|110284983|gb|ABG63042.1| ATP12 ATPase [Chelativorans sp. BNC1]
          Length = 262

 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 104/210 (49%), Gaps = 8/210 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFYE+V    + +GN W V+LD R ++TP+   L LP    A  I  E+   Q + I P
Sbjct: 33  KRFYERVEV--SGEGNAWKVLLDGRAVRTPAGVELVLPNEAAASLIAGEF-AAQGEQIDP 89

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP+ +L  TA++ V      ++E +++  + DL++ RA A   L     + Q +  DP
Sbjct: 90  MSMPVTRLVNTAIDGVAADVQAVMEDILRFASTDLLYYRADAPERLI----QLQAEAWDP 145

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTV-ENLMKKTDDYELAAIDAIAAAAHSLVI 272
           +L W E++   + ++       +Q    I  V  +L  + D   LAA+  +     S ++
Sbjct: 146 VLDWAEAQLSTRFILAEGVMHVEQPRSAIAAVGAHLRPRADPLRLAALHVMTTLTGSAIL 205

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           A+ +    ++ E A E   ++ED  + +WG
Sbjct: 206 ALAVEAHAIEAEAAWEAAHVDEDWNISQWG 235


>gi|395491882|ref|ZP_10423461.1| ATP12 ATPase [Sphingomonas sp. PAMC 26617]
          Length = 230

 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 100/218 (45%), Gaps = 13/218 (5%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEW-DYQQTDGIR 152
           KRF+++V+  +A+ G    + LD R L+TP + PL LPT  LA+A+  EW   ++   I 
Sbjct: 2   KRFWKEVAV-DAERG----IRLDDRPLRTPGRVPLTLPTAALAEAVADEWRSVEEGAEID 56

Query: 153 PFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKID 212
           P  MPL  L   A++RV          L +    DL+  RA +  DL +    RQ    D
Sbjct: 57  PRAMPLTGLGNAAIDRVGADPALFAAGLAQYGESDLLCYRADSPEDLVA----RQAAAWD 112

Query: 213 PLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVI 272
           PLL W  + +     V +      Q    +  +   +   D + LAA+  +     SL+ 
Sbjct: 113 PLLDWARARYDVHIEVATGILHRAQPVVTLARLAEAIAARDAFTLAALSPVVTIGGSLIA 172

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWG---LVEGG 307
           A+ +       E+  + +  +E+ Q ++WG   L E G
Sbjct: 173 ALALVEQAATPEQVWDAVTFDEEYQAERWGRDPLAEAG 210


>gi|195385587|ref|XP_002051486.1| GJ15919 [Drosophila virilis]
 gi|194147943|gb|EDW63641.1| GJ15919 [Drosophila virilis]
          Length = 269

 Score = 85.5 bits (210), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 114/252 (45%), Gaps = 38/252 (15%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+  +    D   G+ V LD+R LKTP+  P  + +  LA A+  E+D Q+ D I  
Sbjct: 28  KRFYKTTNVLCTD--AGYEVTLDHRKLKTPNGAPFMVKSEPLAIAVATEFDGQK-DHIER 84

Query: 154 FMMPLMKLACTALER-VPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKID 212
             M +  L  TA++    LT+  ++ +L+     D V  +   + DL     E Q  + D
Sbjct: 85  SRMHISALCFTAIDNPNKLTKLDMVNYLLNFVATDTVLFQYDDEKDL----QELQRNEWD 140

Query: 213 PLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVE------------NLMKKTDDYELAAI 260
           PL++W               F  + E  L KT+              + K    Y L  +
Sbjct: 141 PLIEW---------------FNQRFETNLQKTMNITPPQVSEVDKMKIAKHLQSYSLETL 185

Query: 261 DAIAAAA---HSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRV 317
                A     S+V+A  +   ++ +E A+ L RLEE+ Q+  WG VE  HD    +L+ 
Sbjct: 186 HGFVFAVDTLKSIVLACAVIDQQITVERAVALSRLEEEYQLKFWGRVEWAHDFSQQELQA 245

Query: 318 QISSATVFLGLS 329
           ++++A +F+  +
Sbjct: 246 RLAAAVLFVHFN 257


>gi|332016866|gb|EGI57675.1| ATP synthase mitochondrial F1 complex assembly factor 2 [Acromyrmex
           echinatior]
          Length = 279

 Score = 85.5 bits (210), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/241 (27%), Positives = 116/241 (48%), Gaps = 16/241 (6%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY +  T     G+ + V LD R LKTP  R  ++ +  LA A+ AEWD Q+ + I  
Sbjct: 34  KRFYRR--TNILSSGDKFEVTLDQRKLKTPQGRIFEVNSKPLALAVAAEWDAQK-ETIDR 90

Query: 154 FMMPLMKLACTALERVPLTRPKI--IEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKI 211
             M L  L  T L+  P  R KI  + H++     D +   +   ++L    ++ Q++K 
Sbjct: 91  GSMHLTSLCNTVLDN-PHNRTKIDLVNHIVNCLEIDTILFYSSEVDEL----YQLQIEKW 145

Query: 212 DPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAA---H 268
           +P++ W   ++  + +   S          ++T   L K    +   +I  +  A     
Sbjct: 146 EPIVHWFCEDYNVEIMRTQSIQAPTVS---METKAALTKHLLSHNFNSIYGLVYAMDGLK 202

Query: 269 SLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGL 328
           S+++ +      + I EA+ L RLEE+ Q+  WG VE  H+    DL+ ++S+A +F+ L
Sbjct: 203 SVILTLATAAKIINIPEAVSLSRLEEEYQISHWGNVEWHHEYGKQDLQARLSAAMLFVYL 262

Query: 329 S 329
           +
Sbjct: 263 N 263


>gi|110678760|ref|YP_681767.1| ATP12 chaperone protein [Roseobacter denitrificans OCh 114]
 gi|109454876|gb|ABG31081.1| ATP12 chaperone protein, putative [Roseobacter denitrificans OCh
           114]
          Length = 236

 Score = 85.5 bits (210), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 98/210 (46%), Gaps = 7/210 (3%)

Query: 93  GKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIR 152
            KRF+++    E  +G G  + LD R +KTP+KR L  PT   A+ I AEW+  Q + I 
Sbjct: 6   AKRFWKEAVIDETAEGFG--IALDGRAVKTPAKRALIAPTRPFAEKIAAEWN-AQGEQID 62

Query: 153 PFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKID 212
           P  MP  + A  AL++V + + ++ + L    + DL+  RA    +   G+  RQ  + D
Sbjct: 63  PATMPFTRSANAALDKVAVQKQEVADMLAAYGDSDLLCYRA----EYPEGLVARQAAQWD 118

Query: 213 PLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVI 272
           PLL W     G +    +      Q    +  +    +    +ELA    + + + SL++
Sbjct: 119 PLLDWAADALGARLDARAGVMHVPQAPEALAVLTEKTRALSSFELAGFHDLVSLSGSLIL 178

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
                   L  +   ++ RL+E  Q ++WG
Sbjct: 179 GFAATHDFLPAKTIWDISRLDEIWQAEEWG 208


>gi|409401831|ref|ZP_11251489.1| ATP12 chaperone protein [Acidocella sp. MX-AZ02]
 gi|409129506|gb|EKM99356.1| ATP12 chaperone protein [Acidocella sp. MX-AZ02]
          Length = 231

 Score = 85.5 bits (210), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 76/240 (31%), Positives = 113/240 (47%), Gaps = 14/240 (5%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRF+   +    D   G+ V LD R +K PS  PL + +L LA+AI  EW+    +   P
Sbjct: 2   KRFWTLAAPLPQD--GGFRVQLDKRLVKMPSGAPLTVASLKLAEAIAQEWNRTGAE-FTP 58

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             +PL ++ CTA ERV L R +II  L      DL+  RA    +L +    RQ  + DP
Sbjct: 59  DDLPLTQMVCTAQERVALHREEIIRQLAAYGLNDLLCYRAEGPPELAA----RQHAQWDP 114

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
            L+W+ +  G   +         Q     + +E L+   DD  LAA+  +  A  S V+ 
Sbjct: 115 WLRWLNATHGIGLITTIGLMPVNQLPWTKEKLEALLAVRDDAALAALGVLIPALGSFVLG 174

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWG---LVEGGHDIDIADLRVQISSATVFLGLSR 330
           +    G L+ + A     L+E  Q ++WG   L E      +AD    +S+A  FL L+R
Sbjct: 175 LAAAEGALEAQAACAAAALDELWQAEQWGDDPLDEARRARVLAD----VSAALDFLNLTR 230


>gi|39936270|ref|NP_948546.1| ATP12 ATPase [Rhodopseudomonas palustris CGA009]
 gi|39650125|emb|CAE28648.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009]
          Length = 261

 Score = 85.5 bits (210), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 99/210 (47%), Gaps = 8/210 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY +     A++  G+ V LD R +KTPS+  L  P   LA+AI AEW   Q + I P
Sbjct: 30  KRFYTEAGV--AEENGGFAVRLDGRAVKTPSRNALAAPDRALAEAIAAEWQ-AQGETIDP 86

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MPL +LA + ++ V      + + + K F  DL+F RA    +L +    R+    DP
Sbjct: 87  STMPLTRLANSVIDGVAGRVEAVTDDIAKYFGSDLLFYRAEHPEELIA----REGAHWDP 142

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           +L W +   G   ++        Q +             D + L A+  +     S ++A
Sbjct: 143 VLFWAKDALGAHFILAQGIVHVGQPE-TALAAARAALPADPWLLGALHVVTTITGSALLA 201

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWGL 303
           + +  G+L+ ++      ++ED  +++WGL
Sbjct: 202 LALAHGRLEADQVWAAAHVDEDWNIEQWGL 231


>gi|359791924|ref|ZP_09294756.1| ATP12 ATPase [Mesorhizobium alhagi CCNWXJ12-2]
 gi|359251987|gb|EHK55287.1| ATP12 ATPase [Mesorhizobium alhagi CCNWXJ12-2]
          Length = 263

 Score = 85.5 bits (210), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 103/210 (49%), Gaps = 8/210 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY +VS   A  G G+ V LD R ++TP K  L LPT   A  +  E    Q + I P
Sbjct: 33  KRFYNEVSVAPA--GEGFGVYLDGRPVRTPGKAVLALPTEAAAALVAEE-FAAQGEKIDP 89

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP+ +L  TA++ V      + + + +  + DL+  RA    D   G+ ERQ +  DP
Sbjct: 90  STMPVYRLVNTAIDGVAADPAAVRDDVARFASSDLLCYRA----DAPVGLVERQAKAWDP 145

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTV-ENLMKKTDDYELAAIDAIAAAAHSLVI 272
           +L W +   G + ++       +Q    +  V E+L  + D   LAA+  + +   S ++
Sbjct: 146 VLDWAQRALGARLLLAEGVIHVEQPRRALDAVGEHLALRQDPLRLAALHLMTSLTGSALL 205

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           AI +  G++  E A     ++ED Q ++WG
Sbjct: 206 AIAVEAGEIDAETAWSAAHVDEDWQAEQWG 235


>gi|319783353|ref|YP_004142829.1| ATP12 ATPase [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317169241|gb|ADV12779.1| ATP12 ATPase [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 262

 Score = 85.1 bits (209), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 105/210 (50%), Gaps = 9/210 (4%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+  S    D  NG+ V LD + ++TP K  L LPT   A  +  E+   Q++ I P
Sbjct: 33  KRFYKAASVTPVD--NGFAVHLDGKPVRTPGKALLVLPTEAAAALVADEF-AAQSETIDP 89

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP+M+L  TA++ V      ++E +++  + DL   RA    D   G+ ERQ Q  DP
Sbjct: 90  VKMPVMRLVNTAIDGVASDPQAVLEDILRFASSDLTCYRA----DAPQGLVERQNQHWDP 145

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTV-ENLMKKTDDYELAAIDAIAAAAHSLVI 272
           ++ W  +  G +  +       +Q    I  +  +L ++ +   LAAI  + +   S ++
Sbjct: 146 VIDWART-LGARFNLAEGIIHVEQPRETIAVLGSHLAQRAEPLRLAAIHVMTSLTGSALL 204

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           A+ +  G++  E A     ++ED Q++ WG
Sbjct: 205 ALAVDFGEIDAEAAWAAAHVDEDWQIEHWG 234


>gi|444525405|gb|ELV14012.1| ATP synthase mitochondrial F1 complex assembly factor 2 [Tupaia
           chinensis]
          Length = 242

 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 101/221 (45%), Gaps = 35/221 (15%)

Query: 110 GWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRPFMMPLMKLACTALERV 169
           G+ + LD+R LKTP  +   +P+  LA A+  EWD QQ D I+ + M L  L  T+L+  
Sbjct: 41  GFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWDSQQ-DTIKFYTMHLTTLCNTSLDN- 98

Query: 170 PLTRPK--IIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDPLLKWVESEFGFKPV 227
           P  R K  +I   +K  + D +                           W   E G    
Sbjct: 99  PTQRNKDQLIRAAVKFLDTDTI---------------------------WYGIEIGSSTS 131

Query: 228 VYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAI 287
           +       K  + LI  + +     + + L  I+ +     S+++ +G+    L +E+A+
Sbjct: 132 IMGPSIPAKTREVLISHLASY----NAWALQGIEFVVTQLKSMLLTLGLVDRHLMVEQAV 187

Query: 288 ELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGL 328
            L RLEE+ Q+ KWG VE  HD ++ +LR + ++  +F+ L
Sbjct: 188 LLSRLEEEYQIQKWGNVEWAHDYELQELRARTAAGALFVHL 228


>gi|402772316|ref|YP_006591853.1| ATP12 ATPase [Methylocystis sp. SC2]
 gi|401774336|emb|CCJ07202.1| ATP12 ATPase [Methylocystis sp. SC2]
          Length = 270

 Score = 84.7 bits (208), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 13/215 (6%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY++     A+ G G  + LD R + TP++RPL  P+L LA+AI AEW  +Q + I P
Sbjct: 34  KRFYKEAVAAPAEGGYG--IFLDGRPVNTPARRPLVAPSLPLAEAIAAEW-AKQGETIDP 90

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MPL KL  TAL+ V     ++   ++K    DL+  RA A   L +     Q    DP
Sbjct: 91  ATMPLTKLMNTALDGVAGQMAEVEAEIVKYAASDLICYRAGAPEGLAAA----QSSAWDP 146

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMK------KTDDYELAAIDAIAAAA 267
           L+ +   + G K  +       +Q    +      ++            LAA+  +   +
Sbjct: 147 LVAFAREKLGAKFALAEGVMFIEQPQAALDAFARALRAYVGEGAGAPLRLAALHVMTTLS 206

Query: 268 HSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
            S V+A+   R  +   +A +   ++ED Q+  WG
Sbjct: 207 GSAVLALAAARHDIDAGKAWDAANVDEDWQMRAWG 241


>gi|339247857|ref|XP_003375562.1| ATP12 chaperone family protein [Trichinella spiralis]
 gi|316971064|gb|EFV54902.1| ATP12 chaperone family protein [Trichinella spiralis]
          Length = 252

 Score = 84.7 bits (208), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 61/233 (26%), Positives = 107/233 (45%), Gaps = 8/233 (3%)

Query: 95  RFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRPF 154
           RFY+ V     D  N +++ LD R LKTP  R L + +  LA  I  EW  Q+ + +   
Sbjct: 19  RFYKSVDVMPVD-LNRFSIRLDQRPLKTPKGRILTVDSEPLALCIAVEWSSQRAN-VDLA 76

Query: 155 MMPLMKLACTALER-VPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
            M L  L  TA++    LT  ++++ L+K    D +F      ND    + + Q  K  P
Sbjct: 77  RMHLTTLCFTAIDNPNQLTNGQVVDDLLKHLESDTIF----FINDQLPELGQMQRDKWGP 132

Query: 214 LLKWVESEFGFKPVVYS-SFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVI 272
           +++W    FG      S + F        + T+       +   L        + +S+++
Sbjct: 133 IIQWATHRFGVSLATPSVTMFPPTLAANSVATMRQYFLSRNWCWLLGCKFAVDSLNSVLL 192

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVF 325
            +     +L + EA++L  LE   Q ++WG +E  HD++  +LR ++S+  +F
Sbjct: 193 TLAACEHRLDVTEAVDLATLERQFQTNRWGRIEWAHDLEEQELRCRVSAGLLF 245


>gi|384411896|ref|YP_005621261.1| ATP12 ATPase [Zymomonas mobilis subsp. mobilis ATCC 10988]
 gi|335932270|gb|AEH62810.1| ATP12 ATPase [Zymomonas mobilis subsp. mobilis ATCC 10988]
          Length = 234

 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 103/209 (49%), Gaps = 7/209 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+K +  +A+   G+   LD R + TP++ PL LPT  LA+A+  EW+ Q  + I  
Sbjct: 4   KRFYKKATVDKAE--IGFAAKLDDRQIMTPARHPLILPTRALAEAVAEEWNNQPKE-IDL 60

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP+   A  A++ VP      +  + +    D+   RA    D    + +R+++  +P
Sbjct: 61  ASMPITGYANAAVDLVPDRYDDFVAGIRQFAESDVTCYRA----DSPQALVDREIELWEP 116

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           LL+W E  F             KQ +  ++ +   +   + +E+ A+  +A  + SLVI 
Sbjct: 117 LLEWAEKRFDIHFHRVVGIIHKKQPEVTLQRIGAAVTDFNHFEIVALTQLATISGSLVIP 176

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           + I   ++  E+A +   ++E  Q ++WG
Sbjct: 177 LAILADEITPEKAFDAAHIDEIWQAEQWG 205


>gi|307173921|gb|EFN64669.1| ATP synthase mitochondrial F1 complex assembly factor 2 [Camponotus
           floridanus]
          Length = 282

 Score = 84.3 bits (207), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 63/240 (26%), Positives = 114/240 (47%), Gaps = 14/240 (5%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY +  T     G+ + + LD R LKTP  R  ++ +  LA A+ AEWD Q+ + I  
Sbjct: 37  KRFYRR--TNILSSGDKFEITLDQRKLKTPQGRVFEVNSKPLALAVAAEWDAQK-ETIDR 93

Query: 154 FMMPLMKLACTALER-VPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKID 212
             M L  L  T L+     T+  ++ H++     D +   +   ++L    ++ QV+K +
Sbjct: 94  GSMHLTSLCNTVLDNPHNYTKIDLVNHIVNSLEMDTILFHSSEVDEL----YQLQVEKWE 149

Query: 213 PLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAA---HS 269
           P+++W    +        S    +     ++T   L +    Y   +I  +  A     S
Sbjct: 150 PIVQWFCKYYDVDIARTQSI---EMPTISVETKAALTRHLLSYNFNSIYGLVYAVDGLKS 206

Query: 270 LVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGLS 329
           +++ +      + + EA+ L RLEE+ Q+  WG VE  H+    DL+ ++S+A +F+ L+
Sbjct: 207 VILTLATAARVINVLEAVNLSRLEEEYQISHWGNVEWHHEYSRHDLQARLSAAMLFVYLN 266


>gi|322709612|gb|EFZ01188.1| ATP12 ATPase family protein [Metarhizium anisopliae ARSEF 23]
          Length = 366

 Score = 84.3 bits (207), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 80/274 (29%), Positives = 127/274 (46%), Gaps = 43/274 (15%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTP-SKRPLKLP--TLGLAKAIGAEWDYQQT-- 148
           KRF+++VS +E D      V LD R L+ P +K  ++LP     LA AI  EWD   +  
Sbjct: 88  KRFWKEVSVQEVD--GALQVHLDTRPLRHPKTKEVIRLPLSKPNLAFAIALEWDTMTSSL 145

Query: 149 DGIRPFMMPLMKLACTALE----------RVPLTRPKIIEHLMKKFNQDLVFCRAP--AD 196
              +   +PL  LAC AL+               R  I   +++  + D + C AP   +
Sbjct: 146 QATKQHFIPLTSLACRALDIEKDDASSAPGAATIRNDITTSVLRYLDTDSLLCWAPPAGE 205

Query: 197 NDLTSGVHE--RQVQK--IDPLLKWVESE----FGFKPVVYS-SFFGGKQEDGLIKTVEN 247
            DL +   E  R VQK   D ++ ++ +        +PV+   +    KQ+DG+ + V+ 
Sbjct: 206 YDLRNDAGESLRDVQKRTTDEIVSFMTTHVWPGIRLEPVLDGHAIMPRKQDDGVREVVQG 265

Query: 248 LMKKTDDYELAAIDAIAAAAHSLVIAI--------GIFR-----GKLQ--IEEAIELIRL 292
            +     +E+A ++    A  SLV A         G  R     G +Q  +EEA + + L
Sbjct: 266 WVSGLSPWEMAGLERAVLAGKSLVAAARFITEWSEGPVRKPNLSGHVQFGVEEAAKTVSL 325

Query: 293 EEDLQVDKWGLVEGGHDIDIADLRVQISSATVFL 326
           E D QV +WG VE  HD++  D+R Q+ S  + +
Sbjct: 326 EVDWQVTQWGEVEDTHDVNNEDVRRQLGSVVLLV 359


>gi|222148669|ref|YP_002549626.1| hypothetical protein Avi_2263 [Agrobacterium vitis S4]
 gi|221735655|gb|ACM36618.1| conserved hypothetical protein [Agrobacterium vitis S4]
          Length = 261

 Score = 84.3 bits (207), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 107/210 (50%), Gaps = 8/210 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+ V+     DG+   V+LD +T+KTP++  L LPT  LA  +  EW   Q + I P
Sbjct: 31  KRFYKDVTIAAGQDGHA--VLLDGKTVKTPARNALVLPTEPLAALVAGEWQ-GQGEFIDP 87

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP+ +L  TAL+ V     ++++ +++    D++  RA A  +L     ERQ  K DP
Sbjct: 88  ATMPVTRLVNTALDAVSANTQEVLDDIVRFCGNDMLCYRADAPQELV----ERQSAKWDP 143

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVEN-LMKKTDDYELAAIDAIAAAAHSLVI 272
           +L W+    G + +  S      Q    I+  E  L +  D   LA++  + +   S ++
Sbjct: 144 VLGWLADTHGARVLQTSGIIYQPQPSDAIEAFERALQRYRDGVALASLHVMTSLTGSAIL 203

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           A+ +  G L + +A +L  L+E+   + WG
Sbjct: 204 ALALADGALTLFDAWDLAHLDENWTDEHWG 233


>gi|339504822|ref|YP_004692242.1| ATP12 chaperone protein [Roseobacter litoralis Och 149]
 gi|338758815|gb|AEI95279.1| ATP12 chaperone protein [Roseobacter litoralis Och 149]
          Length = 236

 Score = 84.3 bits (207), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 7/210 (3%)

Query: 93  GKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIR 152
            KRF++  +  E  +G G  + LD R +KTP+KR L  PT   A+ I  EW+  Q + I 
Sbjct: 6   AKRFWKAAAVDETAEGFG--ISLDGRPVKTPAKRSLIAPTRQFAERIANEWN-AQGEVID 62

Query: 153 PFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKID 212
           P  MP  + A  AL++V +   ++ + L    + DL+  RA     L +    RQ  + D
Sbjct: 63  PGAMPFTRSANAALDKVAVQHDEVADMLAAYGDSDLLCYRAEYPERLVA----RQSAQWD 118

Query: 213 PLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVI 272
           P+L W    FG +    +      QE   +  +    +K   +ELA    + + + SL++
Sbjct: 119 PILDWAAGVFGTRLQTRAGVMHVPQEPEALARLTEKTRKMSAFELAGFHDLVSLSGSLIL 178

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
                   L  +   ++ RL+E  Q ++WG
Sbjct: 179 GFAATHDFLSPKAIWDISRLDEIWQAEEWG 208


>gi|449018184|dbj|BAM81586.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
           10D]
          Length = 364

 Score = 84.3 bits (207), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 84/299 (28%), Positives = 145/299 (48%), Gaps = 21/299 (7%)

Query: 46  PTSSFTFSSPSDKINESIYIKGRKQ--ETASSSSSSVTMPMSFMTG-SIVGK-RFYEKVS 101
           P  SF+  +  D + +    + R Q  +  +S +  + +  +  T  S VG  RF++KV 
Sbjct: 55  PAISFSTKNVHDSVKQQTGQEQRPQLLQQIASDTRGLNVERTLRTNWSGVGPPRFWKKVE 114

Query: 102 T---------READDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIR 152
                     R A+  + + + +D +TL    ++PL  PTL LA A+  EWD +Q++ +R
Sbjct: 115 VAALISSEIGRPAE--HVYCLKVDGKTLCLSPQQPLLAPTLPLALALLYEWD-RQSERLR 171

Query: 153 PFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKID 212
           P +MPL +L   +L      R   +  +++ F  D +     A   L +    RQ +   
Sbjct: 172 PALMPLTRLLAKSLSVDDSCRALYVREILEHFGADSLCFLEHAHASLLA----RQERLWR 227

Query: 213 PLLKWVESEFGFKPVVYSSFF-GGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLV 271
           PL +      G    V +     G Q D  ++ ++  + + D + L A+ +IA  + S +
Sbjct: 228 PLRENASQVLGVPIKVTAELVTAGIQSDFALQRMQEYLDQLDLWSLVALHSIACLSKSAI 287

Query: 272 IAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGLSR 330
           I + I +G++  EEA+   R  ED Q D +G+VEG HD+D A LR  + +A+V   L+R
Sbjct: 288 IGLNIQQGRISTEEAVLAGRCVEDWQADLYGVVEGEHDVDRAFLRANLGAASVLCRLAR 346


>gi|189209033|ref|XP_001940849.1| F1-ATP synthase assembly protein [Pyrenophora tritici-repentis
           Pt-1C-BFP]
 gi|187976942|gb|EDU43568.1| F1-ATP synthase assembly protein [Pyrenophora tritici-repentis
           Pt-1C-BFP]
          Length = 365

 Score = 84.3 bits (207), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 74/274 (27%), Positives = 122/274 (44%), Gaps = 38/274 (13%)

Query: 90  SIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLG--LAKAIGAEWDYQQ 147
           +++ KRF++ VS +E +   G  V LD+R ++ P+K+ L +PT    LA AI  EWD   
Sbjct: 90  NMLAKRFWKDVSVQEGN--GGLQVFLDHRPVRMPNKQTLTVPTSKPQLATAIALEWDLLM 147

Query: 148 T--DGIRPFMMPLMKLACTAL-------ERVPLTRPKIIEHLMKKFNQDLVFCRAPA--- 195
           +    ++   +P+  LA  A+       E     R  I+ + M+  + D + C AP    
Sbjct: 148 SAQQALKNDYIPMTSLAARAIDIEAADGEGRDNVRNDILAYFMRVLSTDTLLCWAPEKVM 207

Query: 196 DNDLTSGVHERQVQK------IDPLLKWVESEFGFKPVV-YSSFFGGKQEDGLIKTVENL 248
           ++ L  G   RQVQ+      I  L   V      KP +   +    +Q +   + +   
Sbjct: 208 NDSLQDGKTLRQVQEEVATGIIAYLQTNVWPGVEIKPTLDPETIIPVEQPELTQQVIRGW 267

Query: 249 MKKTDDYELAAIDAIAAAAHSLVIAIGIFR---------------GKLQIEEAIELIRLE 293
             +   YELA ++    A+ SL++++ +                  +  IE+A     LE
Sbjct: 268 CARLPAYELAGLERAVLASKSLLVSVRLIHEWGEAFAQSRKTTDAHRFSIEDATRASSLE 327

Query: 294 EDLQVDKWGLVEGGHDIDIADLRVQISSATVFLG 327
              Q  +WG VE  HD+   DLR Q+ SA V +G
Sbjct: 328 VSWQTSQWGEVEDTHDVQKEDLRRQLGSAIVLVG 361


>gi|192291992|ref|YP_001992597.1| ATP12 ATPase [Rhodopseudomonas palustris TIE-1]
 gi|192285741|gb|ACF02122.1| ATP12 ATPase [Rhodopseudomonas palustris TIE-1]
          Length = 261

 Score = 84.3 bits (207), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 8/210 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY++ S   A+D  G+ V LD R +KTPS+  L  P   LA+ I AEW   Q + I P
Sbjct: 30  KRFYKQASV--AEDSGGFAVRLDDRPIKTPSRHALAAPDRTLAETIAAEWQ-AQGETIDP 86

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MPL +LA + ++ V      + + + K F  DL+F RA    +L +    R+    DP
Sbjct: 87  STMPLTRLANSVIDGVAGRTEAVTDDIAKYFGSDLLFYRAEHPEELIA----REAAHWDP 142

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           +L W +   G   ++        Q +               + L A+  +     S ++A
Sbjct: 143 VLFWAKDALGAHFILSQGIVHVGQPE-TALAATRAALPGHPWLLGALHVVTTITGSALLA 201

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWGL 303
           + +  G+L  ++      ++ED  +++WGL
Sbjct: 202 LALAHGRLDADQVWAAAHVDEDWNIEQWGL 231


>gi|239831989|ref|ZP_04680318.1| ATP12 ATPase [Ochrobactrum intermedium LMG 3301]
 gi|444308585|ref|ZP_21144230.1| ATP12 ATPase [Ochrobactrum intermedium M86]
 gi|239824256|gb|EEQ95824.1| ATP12 ATPase [Ochrobactrum intermedium LMG 3301]
 gi|443488168|gb|ELT50925.1| ATP12 ATPase [Ochrobactrum intermedium M86]
          Length = 260

 Score = 84.3 bits (207), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 103/210 (49%), Gaps = 9/210 (4%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFYEK    E +   G+ V LD R +KTP++  L+LPT   A  +  E+  Q+   I P
Sbjct: 33  KRFYEKAEVAEVE--GGFAVHLDGRPVKTPARSLLRLPTKAAAVIVADEFAAQEK-VIDP 89

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP  +L  TA++ +      + E +++    D++  RA +  +L S    RQ Q+ DP
Sbjct: 90  GKMPATRLVNTAIDGIAQDPQAVFEDILRFAGTDMLCYRADSPQELVS----RQTQQWDP 145

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVE-NLMKKTDDYELAAIDAIAAAAHSLVI 272
           L+ W+E   G +  +       +Q    I     +L    D   LA++  +     S +I
Sbjct: 146 LIDWMEG-LGARFSLAEGVMHIEQPREAIAAFGVHLSAFKDPIALASLHTMTTLTGSAII 204

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           A+ I +G++  E+  +L  ++ED  ++ WG
Sbjct: 205 ALAIAKGEVTAEQGWQLAHIDEDWTIEHWG 234


>gi|121709077|ref|XP_001272299.1| ATP12 chaperone protein, putative [Aspergillus clavatus NRRL 1]
 gi|119400448|gb|EAW10873.1| ATP12 chaperone protein, putative [Aspergillus clavatus NRRL 1]
          Length = 366

 Score = 84.3 bits (207), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 71/280 (25%), Positives = 126/280 (45%), Gaps = 42/280 (15%)

Query: 89  GSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLG--LAKAIGAEWDYQ 146
            S++ KRF++ V  +   DG+ + VMLD R ++TP+K  L +P+    LA AI  EWD  
Sbjct: 84  SSVLKKRFWKNVDVKRKPDGD-YEVMLDTRPIRTPAKDILSIPSTKPQLANAIALEWDVM 142

Query: 147 QT--DGIRPFMMPLMKLACTALE-------RVPLTRPKIIEHLMKKFNQDLVFCRAPADN 197
            +    ++  ++PL  LA  A +        +  +R +I+   M+  + D + C  P + 
Sbjct: 143 TSAQQALKNHLIPLTSLASRAADIAQEDARGITTSRDQIVNVAMRYLSTDTLLCWVPEEQ 202

Query: 198 -----------DLTSGVHERQVQKIDPLLKWVESE----FGFKPVV-YSSFFGGKQEDGL 241
                      +    + E QV+    ++ ++ ++        P++  +S     Q    
Sbjct: 203 QYAVEETDKNGERAESLREAQVRVAKDIIAFLSTKVWPGIDIVPILDTNSILPVSQPQAT 262

Query: 242 IKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGI-------FR-------GKLQIEEAI 287
              ++  +     Y+LAA++    A+ SL++A+ +       FR        +  IEEA 
Sbjct: 263 KDIIKQWVASLHAYDLAALERGIVASKSLLVAVRLVFEWSENFRQLQRPGQKRFGIEEAA 322

Query: 288 ELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLG 327
           E   LE   Q D WG VE  HD++  DL+ Q+ S  V + 
Sbjct: 323 EASSLEVKWQTDIWGEVEDTHDVNKEDLKRQLGSVIVVVS 362


>gi|306843877|ref|ZP_07476472.1| ATP12 ATPase [Brucella inopinata BO1]
 gi|306275632|gb|EFM57356.1| ATP12 ATPase [Brucella inopinata BO1]
          Length = 260

 Score = 84.0 bits (206), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 102/210 (48%), Gaps = 9/210 (4%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFYEK    E++   G+ V LD R +KTP++  L LPT   A+ +  E+  Q+   I P
Sbjct: 33  KRFYEKAEVAESE--GGFAVHLDGRPVKTPARNLLLLPTRAAAQIVADEFAAQEK-VIDP 89

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP  +L  TA++ +      + E +++    D++  RA +  +L S    RQ +  DP
Sbjct: 90  GKMPATRLVNTAIDGIAQDPQAVFEDILRFAGTDMLCYRADSPQELVS----RQTENWDP 145

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKK-TDDYELAAIDAIAAAAHSLVI 272
           L+ W+ES  G +  +       +Q    I      M    D   LAA+  +     S +I
Sbjct: 146 LIDWMES-LGARFALAEGVMHVEQPREAIAAFSVHMAGFKDPLALAALHTMTTLMGSAII 204

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           A+ + +G++  E+   +  ++ED  ++ WG
Sbjct: 205 ALAVAKGEISAEKGWAIAHIDEDWTIEHWG 234


>gi|313237641|emb|CBY12785.1| unnamed protein product [Oikopleura dioica]
          Length = 276

 Score = 84.0 bits (206), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 112/240 (46%), Gaps = 19/240 (7%)

Query: 105 ADDGNGWTVMLDYRTLKTP-SKRPLKLPTLGLAKAIGAEWDYQQTDG---IRPFMMPLMK 160
           +++  G+ V++D R L+ P +   LK+ +  LA+ +  EW  Q+      I+   + + +
Sbjct: 25  SENHEGYEVLIDGRKLRIPRTSNVLKIKSRDLAEIVALEWAGQEERNLAKIKKHSLYMTQ 84

Query: 161 LACTALE-RVPLTRPKIIEHLMKKFNQDLVFCRAP------ADNDLTSGVHERQVQKIDP 213
           L     E R    + ++I+ L+K    D    R+P       D   +  + E Q +K  P
Sbjct: 85  LCYAESELRETTDKAELIDDLLKYLQTDTCLFRSPFTEAESLDGTPSINLVETQDEKWTP 144

Query: 214 LLKWVESEFGFKPVVYSSF-FGGKQEDGLIKTVENLMKKTDDYE---LAAIDAIAAAAHS 269
           +  W E  F  K  V   F      ED      ENL    + Y+   L A+D +  A  S
Sbjct: 145 VQNWFEERFRTKLEVAKGFRLPTVPEDA----YENLRTHLNSYDIGVLIALDKMCLALKS 200

Query: 270 LVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGLS 329
           +++ + +   KL IE+ + L RLE + Q D WG VE  H ++  D+R +++S  +F+  S
Sbjct: 201 MMLCLMVIERKLSIEDGVLLSRLENEYQKDTWGTVEYHHTVEECDIRAKVASQALFIRYS 260


>gi|440634712|gb|ELR04631.1| hypothetical protein GMDG_06913 [Geomyces destructans 20631-21]
          Length = 381

 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 79/285 (27%), Positives = 125/285 (43%), Gaps = 50/285 (17%)

Query: 89  GSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLP--TLGLAKAIGAEWDY- 145
           GS   KRF++ V+ ++ DDG+   + LD R L+TP+K+ L +    L LA AI  EWD  
Sbjct: 94  GSAKTKRFWKDVNVKKTDDGH--QIFLDTRPLRTPTKQILSVAHTKLHLAHAIALEWDLL 151

Query: 146 -QQTDGIRPFMMPLMKLACTALE-----RVPLT-------RPKIIEHLMKKFNQDLVFCR 192
                 +R  ++PL  L   AL+     + P +       R  I E LM+  + D + C 
Sbjct: 152 VSAQQALRHHLIPLTSLTSRALDIAEEDKKPSSASNPNGLRNTITETLMRYLDTDSLLCW 211

Query: 193 APADNDLTSGVHERQVQKID-----------PLLKWVESEF--GFK--PVV-YSSFFGGK 236
           AP   D   G +E  V + +           P+++++      G +  PV+   S     
Sbjct: 212 APTPPDDPPG-YETHVSRTESLRSIQQRTSLPIIQYLTERVWPGVEIVPVLDEGSIMPNA 270

Query: 237 QEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA----------IGIFRG-----KL 281
           Q    +  ++  +     YELA ++    A   L++A          +   RG     K 
Sbjct: 271 QPQQTLDVIKGWIMGLPAYELAGLEHAVFAGKGLLVAARLLVEWSEELAHLRGEEPEKKF 330

Query: 282 QIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFL 326
            IEEA     LE + Q+  WG+VE  HD+D  D+R Q  S  + +
Sbjct: 331 GIEEAANAATLEIEYQLGMWGVVEDTHDVDREDVRRQFGSVILLV 375


>gi|265984070|ref|ZP_06096805.1| ATP12 ATPase [Brucella sp. 83/13]
 gi|306838363|ref|ZP_07471208.1| ATP12 ATPase [Brucella sp. NF 2653]
 gi|264662662|gb|EEZ32923.1| ATP12 ATPase [Brucella sp. 83/13]
 gi|306406503|gb|EFM62737.1| ATP12 ATPase [Brucella sp. NF 2653]
          Length = 260

 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 102/210 (48%), Gaps = 9/210 (4%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFYEK    E++   G+ V LD R +KTP++  L LPT   A+ +  E+  Q+   I P
Sbjct: 33  KRFYEKAEVAESE--GGFAVHLDGRPVKTPARNLLLLPTRAAAQIVADEFAAQEK-VIDP 89

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP  +L  TA++ +      + E +++    D++  RA +  +L S    RQ +  DP
Sbjct: 90  GKMPATRLVNTAIDGIAQDPQAVFEDILRFAGTDMLCYRADSPQELVS----RQTENWDP 145

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKK-TDDYELAAIDAIAAAAHSLVI 272
           L+ W+ES  G +  +       +Q    I      M    D   LAA+  +     S +I
Sbjct: 146 LIDWMES-LGARFALAEGVMHVEQPREAIAAFSVHMAGFKDPLALAALHTMTTLMGSAII 204

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           A+ + +G++  E+   +  ++ED  ++ WG
Sbjct: 205 ALAVAKGEISAEKGWAIAHIDEDWTIEHWG 234


>gi|23501883|ref|NP_698010.1| hypothetical protein BR1003 [Brucella suis 1330]
 gi|62289926|ref|YP_221719.1| hypothetical protein BruAb1_1008 [Brucella abortus bv. 1 str.
           9-941]
 gi|82699854|ref|YP_414428.1| beta tubulin [Brucella melitensis biovar Abortus 2308]
 gi|163843271|ref|YP_001627675.1| ATP12 ATPase [Brucella suis ATCC 23445]
 gi|189024168|ref|YP_001934936.1| Beta tubulin [Brucella abortus S19]
 gi|225627480|ref|ZP_03785517.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
 gi|225852508|ref|YP_002732741.1| ATPase [Brucella melitensis ATCC 23457]
 gi|237815427|ref|ZP_04594425.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
 gi|256264002|ref|ZP_05466534.1| beta tubulin [Brucella melitensis bv. 2 str. 63/9]
 gi|256369425|ref|YP_003106933.1| hypothetical protein BMI_I1004 [Brucella microti CCM 4915]
 gi|260545325|ref|ZP_05821066.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
 gi|260754738|ref|ZP_05867086.1| ATP12 ATPase [Brucella abortus bv. 6 str. 870]
 gi|260757961|ref|ZP_05870309.1| ATP12 ATPase [Brucella abortus bv. 4 str. 292]
 gi|260761784|ref|ZP_05874127.1| ATP12 ATPase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260883759|ref|ZP_05895373.1| ATP12 ATPase [Brucella abortus bv. 9 str. C68]
 gi|261218656|ref|ZP_05932937.1| ATP12 ATPase [Brucella ceti M13/05/1]
 gi|261222171|ref|ZP_05936452.1| ATP12 ATPase [Brucella ceti B1/94]
 gi|261314269|ref|ZP_05953466.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
 gi|261317637|ref|ZP_05956834.1| ATP12 ATPase [Brucella pinnipedialis B2/94]
 gi|261321846|ref|ZP_05961043.1| ATP12 ATPase [Brucella ceti M644/93/1]
 gi|261752307|ref|ZP_05996016.1| ATP12 ATPase [Brucella suis bv. 5 str. 513]
 gi|261754964|ref|ZP_05998673.1| ATP12 ATPase [Brucella suis bv. 3 str. 686]
 gi|261758191|ref|ZP_06001900.1| beta tubulin [Brucella sp. F5/99]
 gi|265988672|ref|ZP_06101229.1| ATP12 ATPase [Brucella pinnipedialis M292/94/1]
 gi|265994923|ref|ZP_06107480.1| ATP12 ATPase [Brucella melitensis bv. 3 str. Ether]
 gi|265998135|ref|ZP_06110692.1| ATP12 ATPase [Brucella ceti M490/95/1]
 gi|294852406|ref|ZP_06793079.1| ATP12 ATPase [Brucella sp. NVSL 07-0026]
 gi|297248327|ref|ZP_06932045.1| ATP12 ATPase [Brucella abortus bv. 5 str. B3196]
 gi|340790621|ref|YP_004756086.1| hypothetical protein BPI_I1042 [Brucella pinnipedialis B2/94]
 gi|376273269|ref|YP_005151847.1| ATP12 ATPase [Brucella abortus A13334]
 gi|376280677|ref|YP_005154683.1| hypothetical protein BSVBI22_A0999 [Brucella suis VBI22]
 gi|384211370|ref|YP_005600452.1| ATP12 ATPase [Brucella melitensis M5-90]
 gi|384224671|ref|YP_005615835.1| hypothetical protein BS1330_I0999 [Brucella suis 1330]
 gi|384408476|ref|YP_005597097.1| Beta tubulin [Brucella melitensis M28]
 gi|384445069|ref|YP_005603788.1| hypothetical protein [Brucella melitensis NI]
 gi|423166891|ref|ZP_17153594.1| hypothetical protein M17_00581 [Brucella abortus bv. 1 str. NI435a]
 gi|423170735|ref|ZP_17157410.1| hypothetical protein M19_01268 [Brucella abortus bv. 1 str. NI474]
 gi|423173183|ref|ZP_17159854.1| hypothetical protein M1A_00581 [Brucella abortus bv. 1 str. NI486]
 gi|423177530|ref|ZP_17164176.1| hypothetical protein M1E_01772 [Brucella abortus bv. 1 str. NI488]
 gi|423180165|ref|ZP_17166806.1| hypothetical protein M1G_01265 [Brucella abortus bv. 1 str. NI010]
 gi|423183297|ref|ZP_17169934.1| hypothetical protein M1I_01266 [Brucella abortus bv. 1 str. NI016]
 gi|423185763|ref|ZP_17172377.1| hypothetical protein M1K_00581 [Brucella abortus bv. 1 str. NI021]
 gi|423188899|ref|ZP_17175509.1| hypothetical protein M1M_00581 [Brucella abortus bv. 1 str. NI259]
 gi|23347822|gb|AAN29925.1| conserved hypothetical protein [Brucella suis 1330]
 gi|62196058|gb|AAX74358.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
 gi|82615955|emb|CAJ10978.1| Beta tubulin [Brucella melitensis biovar Abortus 2308]
 gi|163673994|gb|ABY38105.1| ATP12 ATPase [Brucella suis ATCC 23445]
 gi|189019740|gb|ACD72462.1| Beta tubulin [Brucella abortus S19]
 gi|225617485|gb|EEH14530.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
 gi|225640873|gb|ACO00787.1| ATP12 ATPase [Brucella melitensis ATCC 23457]
 gi|237790264|gb|EEP64474.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
 gi|255999585|gb|ACU47984.1| hypothetical protein BMI_I1004 [Brucella microti CCM 4915]
 gi|260096732|gb|EEW80607.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
 gi|260668279|gb|EEX55219.1| ATP12 ATPase [Brucella abortus bv. 4 str. 292]
 gi|260672216|gb|EEX59037.1| ATP12 ATPase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260674846|gb|EEX61667.1| ATP12 ATPase [Brucella abortus bv. 6 str. 870]
 gi|260873287|gb|EEX80356.1| ATP12 ATPase [Brucella abortus bv. 9 str. C68]
 gi|260920755|gb|EEX87408.1| ATP12 ATPase [Brucella ceti B1/94]
 gi|260923745|gb|EEX90313.1| ATP12 ATPase [Brucella ceti M13/05/1]
 gi|261294536|gb|EEX98032.1| ATP12 ATPase [Brucella ceti M644/93/1]
 gi|261296860|gb|EEY00357.1| ATP12 ATPase [Brucella pinnipedialis B2/94]
 gi|261303295|gb|EEY06792.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
 gi|261738175|gb|EEY26171.1| beta tubulin [Brucella sp. F5/99]
 gi|261742060|gb|EEY29986.1| ATP12 ATPase [Brucella suis bv. 5 str. 513]
 gi|261744717|gb|EEY32643.1| ATP12 ATPase [Brucella suis bv. 3 str. 686]
 gi|262552603|gb|EEZ08593.1| ATP12 ATPase [Brucella ceti M490/95/1]
 gi|262766036|gb|EEZ11825.1| ATP12 ATPase [Brucella melitensis bv. 3 str. Ether]
 gi|263094146|gb|EEZ18068.1| beta tubulin [Brucella melitensis bv. 2 str. 63/9]
 gi|264660869|gb|EEZ31130.1| ATP12 ATPase [Brucella pinnipedialis M292/94/1]
 gi|294820995|gb|EFG37994.1| ATP12 ATPase [Brucella sp. NVSL 07-0026]
 gi|297175496|gb|EFH34843.1| ATP12 ATPase [Brucella abortus bv. 5 str. B3196]
 gi|326409023|gb|ADZ66088.1| Beta tubulin [Brucella melitensis M28]
 gi|326538733|gb|ADZ86948.1| ATP12 ATPase [Brucella melitensis M5-90]
 gi|340559080|gb|AEK54318.1| hypothetical protein BPI_I1042 [Brucella pinnipedialis B2/94]
 gi|343382851|gb|AEM18343.1| hypothetical protein BS1330_I0999 [Brucella suis 1330]
 gi|349743060|gb|AEQ08603.1| hypothetical protein BMNI_I0980 [Brucella melitensis NI]
 gi|358258276|gb|AEU06011.1| hypothetical protein BSVBI22_A0999 [Brucella suis VBI22]
 gi|363400875|gb|AEW17845.1| ATP12 ATPase [Brucella abortus A13334]
 gi|374539313|gb|EHR10817.1| hypothetical protein M19_01268 [Brucella abortus bv. 1 str. NI474]
 gi|374543122|gb|EHR14606.1| hypothetical protein M17_00581 [Brucella abortus bv. 1 str. NI435a]
 gi|374543738|gb|EHR15220.1| hypothetical protein M1A_00581 [Brucella abortus bv. 1 str. NI486]
 gi|374548729|gb|EHR20176.1| hypothetical protein M1G_01265 [Brucella abortus bv. 1 str. NI010]
 gi|374549360|gb|EHR20803.1| hypothetical protein M1I_01266 [Brucella abortus bv. 1 str. NI016]
 gi|374550012|gb|EHR21453.1| hypothetical protein M1E_01772 [Brucella abortus bv. 1 str. NI488]
 gi|374558557|gb|EHR29950.1| hypothetical protein M1M_00581 [Brucella abortus bv. 1 str. NI259]
 gi|374559854|gb|EHR31239.1| hypothetical protein M1K_00581 [Brucella abortus bv. 1 str. NI021]
          Length = 260

 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 102/210 (48%), Gaps = 9/210 (4%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFYEK    E++   G+ V LD R +KTP++  L LPT   A+ +  E+  Q+   I P
Sbjct: 33  KRFYEKAEVAESE--GGFAVHLDGRPVKTPARNLLLLPTRAAAQIVADEFAAQEK-LIDP 89

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP  +L  TA++ +      + E +++    D++  RA +  +L S    RQ +  DP
Sbjct: 90  GKMPATRLVNTAIDGIAQDPQAVFEDILRFAGTDMLCYRADSPQELVS----RQTENWDP 145

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKK-TDDYELAAIDAIAAAAHSLVI 272
           L+ W+ES  G +  +       +Q    I      M    D   LAA+  +     S +I
Sbjct: 146 LIDWMES-LGARFALAEGVMHVEQPREAIAAFSVHMAGFKDPLALAALHTMTTLMGSAII 204

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           A+ + +G++  E+   +  ++ED  ++ WG
Sbjct: 205 ALAVAKGEISAEKGWAIAHIDEDWTIEHWG 234


>gi|398828316|ref|ZP_10586517.1| chaperone required for the assembly of F1-ATPase [Phyllobacterium
           sp. YR531]
 gi|398218351|gb|EJN04861.1| chaperone required for the assembly of F1-ATPase [Phyllobacterium
           sp. YR531]
          Length = 267

 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 108/211 (51%), Gaps = 8/211 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+  +  E +    + V LD R +KTP+++ L LPT   A+ I  E+  Q+ + I P
Sbjct: 37  KRFYKIAAVAERE--GQFAVELDGRGVKTPARQNLLLPTHAAAQIIADEFTAQEKE-IDP 93

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP  +LA TA++ +      ++E +++  + D++  RA +   L     +RQ    DP
Sbjct: 94  SSMPATRLANTAIDGIVNDPQAVLEDVLRFASSDMLCYRAGSPERLV----QRQTDAWDP 149

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQ-EDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVI 272
           ++ W  +    + V+       +Q  + L     +L   TD + +AA+  I     S ++
Sbjct: 150 IIDWAATALNARFVLAEGVMHVEQPREALGAFGVHLGAFTDPFAIAALHTITTLTGSAIL 209

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWGL 303
           A+ + +G++  +EA +L  LEED   ++WG+
Sbjct: 210 ALAVAKGEVTGDEAWQLAHLEEDWTAEQWGV 240


>gi|322701445|gb|EFY93195.1| ATP12 ATPase family protein [Metarhizium acridum CQMa 102]
          Length = 366

 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 79/274 (28%), Positives = 127/274 (46%), Gaps = 43/274 (15%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTP-SKRPLKLP--TLGLAKAIGAEWDYQQT-- 148
           KRF+++VS +E D      + LD R L+ P +K  ++LP     LA AI  EWD   +  
Sbjct: 88  KRFWKEVSVQEVD--GALQIHLDARPLRHPQTKEVIRLPLSKPNLAFAIALEWDTLTSSL 145

Query: 149 DGIRPFMMPLMKLACTAL--ER--------VPLTRPKIIEHLMKKFNQDLVFCRAP--AD 196
              +   +PL  L C AL  ER            R +I   +++  + D + C AP   +
Sbjct: 146 QATKQHFIPLTSLVCRALDIERDDASSAPGAAKIRNEITTSVLRYLDTDSLLCWAPPAGE 205

Query: 197 NDLTSGVHE--RQVQK--IDPLLKWVESE----FGFKPVV-YSSFFGGKQEDGLIKTVEN 247
           +DL +   E  R VQK   D ++ ++ +        +PV+   +    KQEDG+ + V+ 
Sbjct: 206 HDLRNDAGESLRDVQKRTTDEIVSFMTTHVWPGIKLEPVLDGDAIMPRKQEDGVREVVQG 265

Query: 248 LMKKTDDYELAAIDAIAAAAHSLVIAI--------GIFRG-------KLQIEEAIELIRL 292
            +     +E+A ++    A  SLV A         G  R        +  +EEA + + L
Sbjct: 266 WVSGLSPWEMAGLERAVLAGKSLVAAARFITEWSEGPVRKPNLSSHVQFGVEEAAKTVSL 325

Query: 293 EEDLQVDKWGLVEGGHDIDIADLRVQISSATVFL 326
           E D QV +WG VE  HD++  D+R Q+ S  + +
Sbjct: 326 EVDWQVTQWGEVEDTHDVNNEDVRRQLGSVVLLV 359


>gi|296444793|ref|ZP_06886756.1| ATP12 ATPase [Methylosinus trichosporium OB3b]
 gi|296257741|gb|EFH04805.1| ATP12 ATPase [Methylosinus trichosporium OB3b]
          Length = 271

 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 63/227 (27%), Positives = 107/227 (47%), Gaps = 31/227 (13%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFYE     E+  G+G+ V+LD +++KTP++RPL  P   L+ A+ AEW   Q + + P
Sbjct: 35  KRFYETAEVGES--GHGFAVLLDGKSVKTPARRPLATPWRELSTALAAEW-AGQGERLDP 91

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MPL +L  + ++ V     ++   ++K    DLV  RA     L +     Q +  DP
Sbjct: 92  VTMPLTRLVNSCIDGVAERMDEVAADIVKYAGSDLVSYRAGEPEGLAAA----QAEAWDP 147

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLI------KTVENLMKKTDDY---------ELA 258
           LL +     G  P+  +        +G++      +  E + +   DY          LA
Sbjct: 148 LLAFARDRLG-APLAST--------EGIVFVAQPPQVTEAVARAVRDYAGADAGAPFRLA 198

Query: 259 AIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVE 305
           A+ A+     S +IA+ +   +L+++ A     ++ED Q+  WG  E
Sbjct: 199 ALHAMTTLTGSCIIALAVALRELELDAAWAAAHVDEDHQMRAWGADE 245


>gi|330916867|ref|XP_003297585.1| hypothetical protein PTT_08045 [Pyrenophora teres f. teres 0-1]
 gi|311329622|gb|EFQ94298.1| hypothetical protein PTT_08045 [Pyrenophora teres f. teres 0-1]
          Length = 365

 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 73/277 (26%), Positives = 122/277 (44%), Gaps = 38/277 (13%)

Query: 90  SIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLG--LAKAIGAEWDYQQ 147
           +++ KRF++ VS  E +   G  + LD+R ++ P+K+ L +P     LA AI  EWD   
Sbjct: 90  NMLAKRFWKDVSVNEGN--GGLQIFLDHRPVRMPNKQTLTVPASKPQLATAIALEWDLLM 147

Query: 148 T--DGIRPFMMPLMKLACTAL-------ERVPLTRPKIIEHLMKKFNQDLVFCRAPA--- 195
           +    ++   +P+  LA  A+       E     R  I+ +LM+  + D + C AP    
Sbjct: 148 SAQQALKNDYVPMTSLAARAIDIEAADGEGRDNIRNDILAYLMRVLSTDTLLCWAPEKVM 207

Query: 196 DNDLTSGVHERQVQK------IDPLLKWVESEFGFKPVV-YSSFFGGKQEDGLIKTVENL 248
           ++ L  G   RQVQ+      I  L   V      KP +   +    +Q +   + +   
Sbjct: 208 NDSLQDGKTLRQVQEEVATAIIAHLQTHVWPGVDIKPTLDPETIIPVEQPELTQQVIRGW 267

Query: 249 MKKTDDYELAAIDAIAAAAHSLVIAIGIFR---------------GKLQIEEAIELIRLE 293
             +   YELA ++    A+ SL++++ +                  +  IE+A     LE
Sbjct: 268 CARLPAYELAGLERAVLASKSLLVSVRLIHEWGEAFAQSRKTTDAHRFSIEDATRASSLE 327

Query: 294 EDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGLSR 330
              Q  +WG VE  HD+   DLR Q+ SA + +G  R
Sbjct: 328 VSWQTSQWGEVEDTHDVQKEDLRRQLGSAIILVGGER 364


>gi|391334294|ref|XP_003741540.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor
           2-like [Metaseiulus occidentalis]
          Length = 269

 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/255 (27%), Positives = 119/255 (46%), Gaps = 44/255 (17%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           K+FY+ VS  ++ DG  W V LD R LKTP+ + L +P   +A AI  EW  Q+ + I  
Sbjct: 25  KKFYKNVSIVKSIDG--WEVNLDDRKLKTPAGKLLTVPNEAIAAAIATEWAIQK-NTIER 81

Query: 154 FMMPLMKLACTALERV-PLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKID 212
             M L  LA T+++     T  ++ E +++    D +  R P   +  + ++E Q +K D
Sbjct: 82  HAMHLTSLANTSIDNPHNKTAEQLCEEIVEFLEHDSLLFRMPKSEN--AELYELQCEKWD 139

Query: 213 PLLKWVES--EFGFKP---------------VVYSSFFGGKQED--GLIKTVENLMKKTD 253
           P+L+W     +  F+P                VY   F   +    G+   VE L     
Sbjct: 140 PILEWFSERHQVKFEPSMDIVSPEIPATSVLAVYKDLFSHSRAALFGMQFAVEGL----- 194

Query: 254 DYELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIA 313
                          SL++A       + ++EA++L RLE D Q+ KWG VE  H++D  
Sbjct: 195 --------------KSLILAQAAIDRVVTVDEAVDLSRLETDFQIKKWGSVEWSHELDKQ 240

Query: 314 DLRVQISSATVFLGL 328
            ++ +++++ ++  L
Sbjct: 241 QVKARLAASVLYFQL 255


>gi|400600741|gb|EJP68409.1| ATP12 chaperone [Beauveria bassiana ARSEF 2860]
          Length = 381

 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 77/280 (27%), Positives = 117/280 (41%), Gaps = 56/280 (20%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKR-----PLKLPTLGLAKAIGAEWDY--Q 146
           +RF++ V  +E D      V+LD R L+ P+ +     PL  PTL  A AI  EWD    
Sbjct: 104 RRFWKDVRVKEVD--GALQVLLDARPLRHPNNKEIVRVPLSKPTLATALAI--EWDLLTS 159

Query: 147 QTDGIRPFMMPLMKLACTALERVP--------LTRPKIIEHLMKKFNQDLVFCRAPADND 198
                +  ++PL  L C A++             R  I E +M+  + D + C AP    
Sbjct: 160 AQQATQQHLIPLTSLVCRAIDVAADDALGDRATVRAAIAESVMRYLDTDSLLCWAPPAGK 219

Query: 199 LT----SGVHERQVQKIDPLLKWVESEFGF-----------KPVVYS-SFFGGKQEDGLI 242
           L     +G   R VQK     +  E   GF           KPV+   S F  +Q++G+ 
Sbjct: 220 LDLRNDAGESLRDVQK-----RAAEETVGFLATHVWPGVTVKPVLDGHSIFPAEQDEGVR 274

Query: 243 KTVENLMKKTDDYELAAIDAIAAAAHSLVIAI-----------GIFRG-----KLQIEEA 286
             V+  +     +ELA ++    A  SLV A            G+ +      +   EEA
Sbjct: 275 DVVQGWVMGLSAWELAGLERAVLAGKSLVTAARFIAEWSDDAAGLSKAVARETRFSAEEA 334

Query: 287 IELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFL 326
             +  LE D Q   WG V+  HD++  D+R Q+ S  + +
Sbjct: 335 ARVTSLEVDWQTSHWGEVDDTHDVNREDVRRQLGSVVLLV 374


>gi|195030258|ref|XP_001987985.1| GH10814 [Drosophila grimshawi]
 gi|193903985|gb|EDW02852.1| GH10814 [Drosophila grimshawi]
          Length = 279

 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 112/240 (46%), Gaps = 14/240 (5%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+  +    D G  + V LD+R LKTP+     + +  LA A+  E+D Q+ D I  
Sbjct: 38  KRFYKTTNVLCTDAG--YEVTLDHRKLKTPNGTLFTVKSEPLAIAVATEFDSQK-DHIER 94

Query: 154 FMMPLMKLACTALER-VPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKID 212
             M +  L  TA++    LT+  ++ +L+     D V  +   + DL     E Q  + D
Sbjct: 95  SRMHISALCFTAIDNPNKLTKTDMVNYLLNFAATDTVLFQYDDEKDL----QELQCNEWD 150

Query: 213 PLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAA---HS 269
           P++ W    F    +  ++     Q  G  +    + K    Y L  +     A     S
Sbjct: 151 PVIDWFNQRFE-TNLQKTNNITPPQVTGDDRM--KIAKHFQSYNLETLHGFVFAVDTLKS 207

Query: 270 LVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGLS 329
           +V+A  +    L +E A+ L RLEE+ Q+  WG VE  HD    +L+ ++++A +F+ L+
Sbjct: 208 IVLACAVIEQMLSVERAVALSRLEEEYQLKFWGRVEWAHDFSQQELQARLAAAVLFVHLN 267


>gi|170580241|ref|XP_001895177.1| ATP synthase mitochondrial F1 complex assembly factor 2, putative
           [Brugia malayi]
 gi|158597974|gb|EDP35976.1| ATP synthase mitochondrial F1 complex assembly factor 2, putative
           [Brugia malayi]
          Length = 272

 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 115/240 (47%), Gaps = 19/240 (7%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
            RFYE+           + + LD   L TP + P+K+ +  LA A+  EW+  QT+ +R 
Sbjct: 23  NRFYEEARVVFKPVEEVYNIYLDKHCLVTPKRNPVKIYSEALALAVAQEWN-MQTNELRV 81

Query: 154 FMMPLMKLACTALER-VPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKID 212
            +M L  L  TA +  + L +  ++  +++  ++D V  R   +++L   +H  +    +
Sbjct: 82  NLMRLTGLIFTATDNPMSLQKSDLLSQVLQFLDKDTVLYRLEENSNL---LHLEETN-WN 137

Query: 213 PLLKWVESEFGF----KPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAH 268
           P+++WV  E+G     K V+         ++     + N +   +  +L  +     A  
Sbjct: 138 PVVEWVNWEYGLSVKPKAVI---------DNNSRVRLANQLSDYNFLQLVGLQYATEALK 188

Query: 269 SLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGL 328
           S+ + +     +L I+EA+EL  LE+  Q D WG VE  HDI+  +L  ++S+  + + L
Sbjct: 189 SVFLTLATVSSRLDIDEAVELALLEQKYQSDVWGKVEWAHDIEREELISRLSAGVLLVHL 248


>gi|367042328|ref|XP_003651544.1| hypothetical protein THITE_2064808 [Thielavia terrestris NRRL 8126]
 gi|346998806|gb|AEO65208.1| hypothetical protein THITE_2064808 [Thielavia terrestris NRRL 8126]
          Length = 330

 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 78/308 (25%), Positives = 130/308 (42%), Gaps = 55/308 (17%)

Query: 75  SSSSSVTMPMSFMTGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPS-KRPLKLPTL 133
           S S+      +   G  + +RF++ V  RE +      + LD R L+ P+ K  ++LP  
Sbjct: 22  SGSAGAKTTQTASAGGRLKRRFWKDVHVREVN--GALEIHLDTRPLRHPTTKSIIRLPPS 79

Query: 134 G--LAKAIGAEWD--YQQTDGIRPFMMPLMKLACTALERVPLT-----RPKIIEHLMKKF 184
              LA A+  EWD     +   +  M+PL  L C AL+   LT     RP + + L++  
Sbjct: 80  KPHLAHALALEWDSLTSASQATKQHMIPLTSLVCRALD---LTADASLRPGVAQTLLRYL 136

Query: 185 NQD--LVFCRAPADNDL--------TSGVHERQVQKIDPLLKWVESEFG----FKPVVY- 229
           + D  L FC AP+  +            +HERQ Q       +V +        +PV+  
Sbjct: 137 DTDSLLCFCPAPSPEESDDHDHDDPAQQLHERQRQAYAETAAYVTARLWPGVRVEPVLEG 196

Query: 230 SSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIF------------ 277
           +S    +Q  G  + V++ +     +ELA ++    A  SL+ A  +             
Sbjct: 197 ASIVPRQQAPGTREAVQDWILSLSGFELAGLERATLAGKSLLAAARLVAEWSEEGAAAAG 256

Query: 278 -------------RGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATV 324
                        R +  +EEA + + LE   Q  +WG VE  HD++  DLR Q+ S  +
Sbjct: 257 PANGQAGVEEEKNRKRFGVEEAAQAVSLEVTWQTRQWGEVEDTHDVEKEDLRRQLGSVVL 316

Query: 325 FLGLSRRN 332
            +  +R+ 
Sbjct: 317 LVSGTRKG 324


>gi|386402209|ref|ZP_10086987.1| chaperone required for the assembly of F1-ATPase [Bradyrhizobium
           sp. WSM1253]
 gi|385742835|gb|EIG63031.1| chaperone required for the assembly of F1-ATPase [Bradyrhizobium
           sp. WSM1253]
          Length = 264

 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 101/212 (47%), Gaps = 8/212 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY++    EA+DG  + + LD + ++TPS R + +P+  LA A+ AEW   Q + I+P
Sbjct: 30  KRFYKEAGVTEAEDG--FAITLDGKAIRTPSGRQVVIPSRALADAVAAEW-ADQNETIKP 86

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MPL ++A + +E V      + + L K    DL+F RA     L +    R+    DP
Sbjct: 87  MTMPLTRIANSVVEGVVDRVDLVTDDLAKYLQSDLLFYRAGHPEGLVA----REAAHWDP 142

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           +L W     G   ++        Q +  ++     +   D + +AA+  I     S ++A
Sbjct: 143 VLFWAAETLGAHFILSEGVMHVTQPEEALQAARAALPG-DAWSVAALHVITTLTGSALLA 201

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWGLVE 305
           + +  G    ++      ++ED   +KWG+ E
Sbjct: 202 LALAHGVRDADQVWAAAYVDEDWNAEKWGVDE 233


>gi|161618956|ref|YP_001592843.1| ATP12 ATPase [Brucella canis ATCC 23365]
 gi|260566457|ref|ZP_05836927.1| beta tubulin [Brucella suis bv. 4 str. 40]
 gi|376274258|ref|YP_005114697.1| beta tubulin [Brucella canis HSK A52141]
 gi|161335767|gb|ABX62072.1| ATP12 ATPase [Brucella canis ATCC 23365]
 gi|260155975|gb|EEW91055.1| beta tubulin [Brucella suis bv. 4 str. 40]
 gi|363402825|gb|AEW13120.1| beta tubulin [Brucella canis HSK A52141]
          Length = 260

 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 102/210 (48%), Gaps = 9/210 (4%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFYEK    E++   G+ V LD R +KTP++  L LPT   A+ +  E+  Q+   I P
Sbjct: 33  KRFYEKAEVAESE--GGFAVHLDGRPVKTPARNLLLLPTRAAAQIVADEFAAQEK-LIDP 89

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP  +L  TA++ +      + E +++    D++  RA +  +L S    RQ +  DP
Sbjct: 90  GKMPATRLVNTAIDGIAQDPQAVFEDILRFAGTDMLCYRADSPQELVS----RQTENWDP 145

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKK-TDDYELAAIDAIAAAAHSLVI 272
           L+ W+ES  G +  +       +Q    I      M    D   LAA+  +     S +I
Sbjct: 146 LIDWMES-LGARFALAEGVMHVEQPREAIAAFSVHMAGFKDPLALAALHTMTTLMGSAII 204

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           A+ + +G++  E+   +  ++ED  ++ WG
Sbjct: 205 ALAVAKGEISAEKGWVIAHIDEDWTIEHWG 234


>gi|338974998|ref|ZP_08630353.1| ATPase [Bradyrhizobiaceae bacterium SG-6C]
 gi|338231597|gb|EGP06732.1| ATPase [Bradyrhizobiaceae bacterium SG-6C]
          Length = 257

 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 94/212 (44%), Gaps = 8/212 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           K+FY      E   G G  V LD + ++TP K  L  PT  LA+AI AEWD  Q + I P
Sbjct: 30  KKFYTSAGVAEGPGGFG--VTLDGKQVRTPGKNLLAAPTRDLAEAIAAEWD-AQGENIDP 86

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MPL +LA + ++ V      + +   K    DL+F RA   + L +    RQ +  DP
Sbjct: 87  MSMPLTRLANSVIDGVAANVQAVADDAAKYLETDLLFYRAGFPDALVA----RQAEHWDP 142

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           +L+W     G   ++       +Q +  +      +  ++ +   A   +     S ++A
Sbjct: 143 VLRWAADSLGAHFILGEGVVHVRQPETAVAAARAAL-PSEAWPAGAFHVVTTMTGSALLA 201

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWGLVE 305
           + +  G L   +      ++ED   +KWG  E
Sbjct: 202 LALKHGILDGSQVWAAAHVDEDWNSEKWGADE 233


>gi|320032048|gb|EFW14004.1| F1-ATP synthase assembly protein [Coccidioides posadasii str.
           Silveira]
          Length = 369

 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 81/308 (26%), Positives = 131/308 (42%), Gaps = 43/308 (13%)

Query: 65  IKGRKQETASSSSSSVTMPMSFMTGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPS 124
           I+ R++++        T+       S + KRF++ V  +EA    G+ V+LD R ++TP+
Sbjct: 64  IERRRKQSELLRQDKDTLAAKGGAASPLRKRFWKDVHVKEA--AEGYQVLLDSRPIRTPA 121

Query: 125 KRPLKLPTLG--LAKAIGAEWD--YQQTDGIRPFMMPLMKLACTALERV-------PLTR 173
           K  L +P     LA AI  EWD        +R  ++PL  L   A + V          R
Sbjct: 122 KTILNIPRSKPHLAHAIALEWDQLVSAQQALRHHLIPLTSLTARAEDIVQQDSRGESTIR 181

Query: 174 PKIIEHLMKKFNQDLVFCRAPA----DNDLTSGVHER-------QVQKIDPLLKWVES-- 220
            +I+  LM+  + D +   AP     D D T G  E        Q++   P++ ++ +  
Sbjct: 182 NEIMRTLMRYLDTDTLLSWAPQKGPYDIDSTEGAEEAPRSLRDLQIRTAQPIIGFLTTVV 241

Query: 221 --EFGFKPVVYS-SFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIF 277
                 KPV+   S     Q     + +   +     YELA ++    A+ SL+I + + 
Sbjct: 242 WPGIEIKPVLEEDSILPVSQPQMTKEVIRGWVTGLPAYELAGLERAVLASKSLLIGVRLV 301

Query: 278 --------------RGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSAT 323
                         R    IE+A E   LE   Q ++WG VE  HD++  DL  Q+ SA 
Sbjct: 302 VEWSEHFRDLQPGGRRTFGIEKAAEASSLEVKWQTEQWGEVEDTHDVEKEDLSRQLGSAV 361

Query: 324 VFLGLSRR 331
           + +   RR
Sbjct: 362 LLVSGERR 369


>gi|17987263|ref|NP_539897.1| hypothetical protein BMEI0980 [Brucella melitensis bv. 1 str. 16M]
 gi|260564008|ref|ZP_05834494.1| beta tubulin [Brucella melitensis bv. 1 str. 16M]
 gi|265991086|ref|ZP_06103643.1| ATP12 ATPase [Brucella melitensis bv. 1 str. Rev.1]
 gi|17982939|gb|AAL52161.1| hypothetical protein BMEI0980 [Brucella melitensis bv. 1 str. 16M]
 gi|260154024|gb|EEW89116.1| beta tubulin [Brucella melitensis bv. 1 str. 16M]
 gi|263001870|gb|EEZ14445.1| ATP12 ATPase [Brucella melitensis bv. 1 str. Rev.1]
          Length = 260

 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 101/210 (48%), Gaps = 9/210 (4%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFYEK    E++   G+ V LD R +KTP++  L LPT   A+ +  E+  Q+   I P
Sbjct: 33  KRFYEKAEVAESE--GGFAVHLDGRPVKTPARNLLLLPTRAAAQIVADEFAAQEK-LIDP 89

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP  +L  TA++ +      + E ++     D++  RA +  +L S    RQ +  DP
Sbjct: 90  GKMPATRLVNTAIDGIAQDPQAVFEDILHFAGTDMLCYRADSPQELVS----RQTENWDP 145

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKK-TDDYELAAIDAIAAAAHSLVI 272
           L+ W+ES  G +  +       +Q    I      M    D   LAA+  +     S +I
Sbjct: 146 LIDWMES-LGARFALAEGVMHVEQPREAIAAFSVHMAGFKDPLALAALHTMTTLMGSAII 204

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           A+ + +G++  E+   +  ++ED  ++ WG
Sbjct: 205 ALAVAKGEISAEKGWAIAHIDEDWTIEHWG 234


>gi|350424249|ref|XP_003493734.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor
           2-like [Bombus impatiens]
          Length = 268

 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/240 (27%), Positives = 113/240 (47%), Gaps = 14/240 (5%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           +RFY K +    D    + + LD R LKTP  + L++ +  LA AI  EWD Q+ + I  
Sbjct: 23  RRFYRKTNILLCD--GKFEITLDQRKLKTPQGKILQVESKPLALAIATEWDMQK-NIIDR 79

Query: 154 FMMPLMKLACTALER-VPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKID 212
             M L  L  T ++     T+  +  H++     D V   +  + +L    ++ Q +  D
Sbjct: 80  SSMHLTALCNTVIDNPNNHTKQDMANHIVNCLEMDTVLFHSYENEEL----YKIQTENWD 135

Query: 213 PLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAI---AAAAHS 269
           PL++W   ++G   V   S           KT+  L +    Y  +A+        A  S
Sbjct: 136 PLIQWFCDKYGVNLVKTQSI-EAPTVSSETKTI--LTRHLMSYNYSAVYGFMYGVDALKS 192

Query: 270 LVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGLS 329
           +++ +      + IEEA+   RLEE+ Q+  WG VE  HD +  DL+ ++++A +F+ L+
Sbjct: 193 VILTLAAAERVISIEEAVRQSRLEENYQISHWGSVEWFHDQNKYDLQARLAAAILFVHLN 252


>gi|340519597|gb|EGR49835.1| predicted protein [Trichoderma reesei QM6a]
          Length = 364

 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 74/278 (26%), Positives = 119/278 (42%), Gaps = 47/278 (16%)

Query: 92  VGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKR-----PLKLPTLGLAKAIGAEWDY- 145
           V +RF+++V+ RE D      V LD R L+ P+ +     PL  P L  A A+  EWD  
Sbjct: 83  VARRFWKEVTVREVD--GALQVHLDARPLRHPNTKAIIRLPLSKPNL--ASALALEWDIL 138

Query: 146 -QQTDGIRPFMMPLMKLACTALE----------RVPLTRPKIIEHLMKKFNQDLVFCRAP 194
                  +  ++PL  L C AL+               R  I   +++  + D + C AP
Sbjct: 139 TSAQQATKQHLIPLTSLVCRALDILEDDASNRPEAAKIRTAITNTVLRYLDTDSLLCWAP 198

Query: 195 A----DNDLTSGVHERQVQK------IDPLLKWVESEFGFKPVV-YSSFFGGKQEDGLIK 243
                D    +G   R VQK      +  L   V      +PV+   S    KQ +G+ +
Sbjct: 199 PAGPHDRRNDAGESLRDVQKKAAEETVSYLTTHVWPGITIEPVLDGHSIVPRKQPEGVRE 258

Query: 244 TVENLMKKTDDYELAAIDAIAAAAHSLVIA-----------IGIFR----GKLQIEEAIE 288
            ++  +   D +E+A ++    A  S V A           +G  R    G+  +E+A +
Sbjct: 259 VIQGWVMGLDAWEIAGLERAVLAGKSFVAAARIVAEWSEGAVGTGRMLPLGRFSVEQAAK 318

Query: 289 LIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFL 326
              LE D Q ++WG VE  HD++  D+R Q+ S  + +
Sbjct: 319 ATSLEVDWQAEQWGEVEDTHDVNQEDVRRQLGSVVLLV 356


>gi|302918879|ref|XP_003052747.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256733687|gb|EEU47034.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 366

 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 80/274 (29%), Positives = 118/274 (43%), Gaps = 43/274 (15%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTP-SKRPLKLPTL--GLAKAIGAEWDY--QQT 148
           KRF++ V+ +E D      V LD R L+ P SK  + LP     LA A+  EWD      
Sbjct: 89  KRFWKDVAVKEVD--GSLQVFLDTRPLRHPVSKEIVCLPMSKPDLASALALEWDLLTSAQ 146

Query: 149 DGIRPFMMPLMKLACTALE----------RVPLTRPKIIEHLMKKFNQDLVFCRAPA--D 196
           D  R  ++PL  L C AL+           +   R  I   L++  + D + C AP   +
Sbjct: 147 DATRQHLIPLTSLTCRALDIAEADKASGAEISEVRNAISTTLLRYLDTDSILCWAPPARE 206

Query: 197 NDLTSGVHE--RQVQK------IDPLLKWVESEFGFKPVVYS-SFFGGKQEDGLIKTVEN 247
           +DL +   E  R VQK      +  L   V       PV+   S     Q  G+ + V+ 
Sbjct: 207 HDLKNDAGESLRDVQKRIAEDIVSFLTTHVWPGITITPVLDGHSILPQAQSPGVREVVQG 266

Query: 248 LMKKTDDYELAAIDAIAAAAHSLVIAI-------------GIFR--GKLQIEEAIELIRL 292
            +   D +E+A ++ +A A  SL+ A              G F    K  +EEA     L
Sbjct: 267 WIAGLDAFEIAGLERVALAGKSLIAAARFIVEWSEGSAGKGEFNQGKKFGVEEASVATSL 326

Query: 293 EEDLQVDKWGLVEGGHDIDIADLRVQISSATVFL 326
           E D Q  +WG VE  HD++  D+R Q+ S  + +
Sbjct: 327 EVDWQTGQWGEVEDTHDVNKEDVRRQMGSVVLLV 360


>gi|340723220|ref|XP_003399991.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor
           2-like [Bombus terrestris]
          Length = 268

 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/254 (26%), Positives = 117/254 (46%), Gaps = 14/254 (5%)

Query: 80  VTMPMSFMTGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAI 139
           + M  + +      +RFY K +    D    + + LD R LKTP  + L++ +  LA AI
Sbjct: 9   LVMTFNIVRNMATLRRFYRKTNILLCD--GKFEITLDQRKLKTPQGKILQVESKPLALAI 66

Query: 140 GAEWDYQQTDGIRPFMMPLMKLACTALER-VPLTRPKIIEHLMKKFNQDLVFCRAPADND 198
             EWD Q+ D I    M L  L  T ++     T+  +  +++     D V   +  + +
Sbjct: 67  ATEWDMQK-DIIDRSSMHLTALCNTVIDNPNNHTKQDMANYIVNCLEMDTVLFHSYENEE 125

Query: 199 LTSGVHERQVQKIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELA 258
           L    ++ Q +  DPL++W   ++G   V   S           KTV  L +    Y  +
Sbjct: 126 L----YKIQTENWDPLVQWFCDKYGVNLVKTQSI-EAPTVSSETKTV--LTRHLMSYNYS 178

Query: 259 AIDAI---AAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADL 315
           A+        A  S+++ +      + IEEA+   RLEE+ Q+  WG VE  HD +  DL
Sbjct: 179 AVYGFMYGVDAIKSVILTLAAAERIISIEEAVRQSRLEENYQISHWGSVEWFHDQNKYDL 238

Query: 316 RVQISSATVFLGLS 329
           + ++++A +F+ L+
Sbjct: 239 QARLAAAILFVHLN 252


>gi|303315877|ref|XP_003067943.1| ATP12 ATPase family protein [Coccidioides posadasii C735 delta
           SOWgp]
 gi|240107619|gb|EER25798.1| ATP12 ATPase family protein [Coccidioides posadasii C735 delta
           SOWgp]
          Length = 377

 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 83/314 (26%), Positives = 134/314 (42%), Gaps = 47/314 (14%)

Query: 65  IKGRKQETASSSSSSVTMPMSFMTGSIVGKRFYEKVSTREA-DDGN-----GWTVMLDYR 118
           I+ R++++        T+       S + KRF++ V  +EA  + N     G+ V+LD R
Sbjct: 64  IERRRKQSELLRQDKDTLAAKGGAASPLRKRFWKDVHVKEAAGEANSITLKGYQVLLDSR 123

Query: 119 TLKTPSKRPLKLPTLG--LAKAIGAEWD--YQQTDGIRPFMMPLMKLACTALERV----- 169
            ++TP+K  L +P     LA AI  EWD        +R  ++PL  L   A + V     
Sbjct: 124 PIRTPAKTILNIPRSKPHLAHAIALEWDQLVSAQQALRHHLIPLTSLTARAEDIVQQDSR 183

Query: 170 --PLTRPKIIEHLMKKFNQDLVFCRAPA----DNDLTSGVHER-------QVQKIDPLLK 216
                R +I+  LM+  + D +   AP     D D T G  E        Q++   P++ 
Sbjct: 184 GESTIRNEIMRTLMRYLDTDTLLSWAPQKGPYDIDSTEGAEEAPRSLRDLQIRTAQPIIG 243

Query: 217 WVES----EFGFKPVVYS-SFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLV 271
           ++ +        KPV+   S     Q     + +   +     YELA ++    A+ SL+
Sbjct: 244 FLTTVVWPGIEIKPVLEEDSILPVSQPQMTKEVIRGWITGLPAYELAGLERAVLASKSLL 303

Query: 272 IAIGIF--------------RGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRV 317
           I + +               R    IE+A E   LE   Q ++WG VE  HD++  DLR 
Sbjct: 304 IGVRLVVEWSEHFRDLQPGGRRTFGIEKAAEASSLEVKWQTEQWGEVEDTHDVEKEDLRR 363

Query: 318 QISSATVFLGLSRR 331
           Q+ SA + +   RR
Sbjct: 364 QLGSAVLLVSGERR 377


>gi|404319119|ref|ZP_10967052.1| ATP12 ATPase [Ochrobactrum anthropi CTS-325]
          Length = 260

 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 102/210 (48%), Gaps = 9/210 (4%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFYEK    E +   G+ V LD R +KTP++  L LPT   A+ +  E+  Q+   I P
Sbjct: 33  KRFYEKAEVAEVE--GGFAVHLDGRPVKTPARNLLLLPTKAAAQIVADEFTAQEK-VIDP 89

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP  +L  TA++ +      + E +++    D++  RA +  +L S    RQ ++ DP
Sbjct: 90  GKMPATRLVNTAIDGIAQDPQAVFEDILRFAGTDMLCYRADSPQELVS----RQTEQWDP 145

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVE-NLMKKTDDYELAAIDAIAAAAHSLVI 272
           L+ W+E   G +  +       +Q    I     +L    D   LA++  +     S +I
Sbjct: 146 LIDWMEG-LGARFSLAEGVMHVEQPREAIAAFGVHLAGFKDPIALASLHTMTTLTGSAII 204

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           A+ I +G++  E+   L  ++ED  ++ WG
Sbjct: 205 ALAIAKGEITAEQGWNLAHIDEDWTIEHWG 234


>gi|406695571|gb|EKC98874.1| hypothetical protein A1Q2_06845 [Trichosporon asahii var. asahii
           CBS 8904]
          Length = 241

 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/220 (26%), Positives = 96/220 (43%), Gaps = 35/220 (15%)

Query: 109 NGWTVMLDYRTLKTPSKRPLKLPTLG--LAKAIGAEWDYQQTDGIRPFMMPLMKLACTAL 166
           N  TV LD+R LKTP    + +P     LA  I AEW+ Q                    
Sbjct: 51  NRITVTLDHRNLKTPEGAKMVIPKERQLLAMMIAAEWENQ-------------------- 90

Query: 167 ERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDPLLKWVESEFGFKP 226
                      + ++K++   L+    P  +D  + +   Q +   PL+KW++ E+G   
Sbjct: 91  -----------DQVLKQYALPLLTTSYP--DDHPAALVRLQEEHWAPLVKWLKDEYGITL 137

Query: 227 VVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGKLQIEEA 286
                F   +Q    I    N+++  D ++LAA++    A  S VI + +  G++   EA
Sbjct: 138 KEAEGFGVAEQTPETIAKFRNILEDMDPFQLAAMERAVYATKSFVIGLALVEGRITAHEA 197

Query: 287 IELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFL 326
                +E   Q+++WG VE  HD+D  D+R  + SA V L
Sbjct: 198 ALASHVEVASQIERWGEVEDSHDVDYQDIRRALGSAAVAL 237


>gi|349686576|ref|ZP_08897718.1| ATP synthase F1 mitochondrial assembly chaperone [Gluconacetobacter
           oboediens 174Bp2]
          Length = 257

 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 100/212 (47%), Gaps = 9/212 (4%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDY---QQTDG 150
           +RF+   + R A+   G+ V LD R ++ P   PL + +  LA AI  EW +   ++   
Sbjct: 23  RRFWTLAAARPAE--GGFCVELDGRGIRLPGGTPLCVMSRALAGAIADEWAHAGGEKGGD 80

Query: 151 IRPFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQK 210
             P  +P+ ++  T +ERV       +  L++  + +L+  RA    D  + +  RQ  +
Sbjct: 81  FTPDDLPMTRITGTMIERVAPDPSAQVTALLQYVDGELLCYRA----DHPALLCARQKAE 136

Query: 211 IDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSL 270
            DP L W+++ +G    V        Q   +      ++ K D+  LAA+  +  A  S+
Sbjct: 137 WDPQLAWLQARYGIAMAVTQGIMPLSQSQAVQVAWRGILDKMDNATLAALGVMVPAMKSI 196

Query: 271 VIAIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           V+ + +  G L   +A E+  ++E  Q+D WG
Sbjct: 197 VLGLAVVTGALSAAKAAEVASVDERTQMDIWG 228


>gi|365891924|ref|ZP_09430284.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3809]
 gi|365332086|emb|CCE02815.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3809]
          Length = 260

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 8/212 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY++  + EA+   G+ V LD R ++TPS R + +P   LA+A+ AEW   Q + I P
Sbjct: 30  KRFYKEAGSAEAE--GGFHVTLDGRPIRTPSGRIVVVPVKELAEAVAAEWG-AQGETIDP 86

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MPL + A + ++ V      + E + +    DL+F RA        G+ +R+ +  DP
Sbjct: 87  ATMPLTRFANSVVQSVVERVDDVREDIARYLQSDLLFYRA----GHPEGLVDREAEHWDP 142

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           +L W     G   ++        Q D  ++    ++  T  + +AA   +     S ++A
Sbjct: 143 VLDWARDSLGAHFILSEGIMHVSQPDAAVQAAREVL-PTGPWAVAAAHVVTTVTGSALLA 201

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWGLVE 305
           + +  G    ++      ++ED  V++WG  E
Sbjct: 202 LALAHGVRDADQVWAAANVDEDWNVEQWGADE 233


>gi|114327248|ref|YP_744405.1| chaperone, ATP12 family protein [Granulibacter bethesdensis
           CGDNIH1]
 gi|114315422|gb|ABI61482.1| chaperone, ATP12 family protein [Granulibacter bethesdensis
           CGDNIH1]
          Length = 236

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 112/243 (46%), Gaps = 19/243 (7%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRF+++ +     +  G  V LD R ++ P    L+     LA+AI  EW      G  P
Sbjct: 2   KRFWKEAAV--VQEAAGLAVTLDGRPMRLPGGVSLRFANRALAEAIAVEWGQAGAPG-EP 58

Query: 154 F---MMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQK 210
           F   M+P+ +LA TA ERV +     +E L+     DL+  RA    +LT+    RQ + 
Sbjct: 59  FSFDMVPMTRLAGTAQERVAVDPAASVEALVSYGGSDLLCYRADGPEELTT----RQERL 114

Query: 211 IDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSL 270
             PLL W E  +G +  V +      Q +  +  +   +       LAA+  +  A  SL
Sbjct: 115 WQPLLDWAEQRYGARLHVTTGIIHVSQPEASLMALRAALTALAPAALAALGIVVPALGSL 174

Query: 271 VIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISS----ATVFL 326
           VI + +  G+L   EA+E+  L++  Q +KW     G D + A  R  +++    A  FL
Sbjct: 175 VIGLALAEGRLDPPEALEIALLDDLYQEEKW-----GADAEAAKRRTHLAADVETAIRFL 229

Query: 327 GLS 329
            LS
Sbjct: 230 RLS 232


>gi|342876648|gb|EGU78231.1| hypothetical protein FOXB_11257 [Fusarium oxysporum Fo5176]
          Length = 367

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 77/273 (28%), Positives = 118/273 (43%), Gaps = 43/273 (15%)

Query: 95  RFYEKVSTREADDGNGWTVMLDYRTLKTP-SKRPLKLPTL--GLAKAIGAEWDYQQT--D 149
           RF++ VS +E D      V LD R L+ P +K  +++P     LA A+  EWD   +  D
Sbjct: 90  RFWKDVSVKEVD--GALQVFLDTRPLRHPVTKEIVRIPITKPDLASALALEWDLLTSAQD 147

Query: 150 GIRPFMMPLMKLACTALE----------RVPLTRPKIIEHLMKKFNQDLVFCRAP--ADN 197
             R  ++PL  L C AL+           +   R  I   L++  + D + C  P   ++
Sbjct: 148 ATRHHLIPLTSLTCRALDIAAADNTPGGEISEVRNAIATTLLRYLDTDSILCWNPPAGEH 207

Query: 198 DLTSGVHE--RQVQK------IDPLLKWVESEFGFKPVV-YSSFFGGKQEDGLIKTVENL 248
           DL +   E  R VQK      +  L   V       PV+   S     Q  G+ + V+  
Sbjct: 208 DLKNDAGESLRDVQKRTAEEIVSFLTTHVWPGITINPVLDGHSILPQSQAPGVREIVQGW 267

Query: 249 MKKTDDYELAAIDAIAAAAHSLVIAI---------GIFRGKLQ------IEEAIELIRLE 293
           +   D +E+A ++    A  SL+ A           + RG L       +EEA     LE
Sbjct: 268 ITGLDAFEIAGLERATLAGKSLIAAARFVVEWTEGSVARGHLNPGKKFGVEEAAVATSLE 327

Query: 294 EDLQVDKWGLVEGGHDIDIADLRVQISSATVFL 326
            D Q  +WG VE  HD++  D+R Q+ S T+ +
Sbjct: 328 VDWQTGQWGEVEDTHDVNKEDVRRQLGSVTLLV 360


>gi|148560190|ref|YP_001258943.1| hypothetical protein BOV_0969 [Brucella ovis ATCC 25840]
 gi|148371447|gb|ABQ61426.1| conserved hypothetical protein [Brucella ovis ATCC 25840]
          Length = 234

 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 102/210 (48%), Gaps = 9/210 (4%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFYEK    E++   G+ V LD R +KTP++  L LPT   A+ +  E+  Q+   I P
Sbjct: 7   KRFYEKAEVAESE--GGFAVHLDGRPVKTPARNLLLLPTRAAAQIVADEFAAQEK-LIDP 63

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP  +L  TA++ +      + E +++    D++  RA +  +L S    RQ +   P
Sbjct: 64  GKMPATRLVNTAIDGIAQDPQAVFEDILRFAGTDMLCYRADSPQELVS----RQTENWGP 119

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKK-TDDYELAAIDAIAAAAHSLVI 272
           L+ W+ES  G +  +  S    +Q    I      M    D   LAA+  +     S +I
Sbjct: 120 LIDWMES-LGARFALAESVMHVEQPREAIAAFSVHMAGFKDPLALAALHTMTTLMGSAII 178

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           A+ + +G++  E+   +  ++ED  ++ WG
Sbjct: 179 ALAVAKGEISAEKGWAIAHIDEDWTIEHWG 208


>gi|306840490|ref|ZP_07473249.1| ATP12 ATPase [Brucella sp. BO2]
 gi|306289505|gb|EFM60723.1| ATP12 ATPase [Brucella sp. BO2]
          Length = 260

 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 102/210 (48%), Gaps = 9/210 (4%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+K    E++   G+ V LD R +KTP++  L LPT   A+ +  E+  Q+   I P
Sbjct: 33  KRFYDKAEVAESE--GGFAVHLDGRPVKTPARNLLLLPTRAAAQIVADEFAAQEK-VIDP 89

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP  +L  TA++ +      + E +++    D++  RA +  +L S    RQ +  DP
Sbjct: 90  GKMPATRLVNTAIDGIAQDPQAVFEDILRFAGTDMLCYRADSPQELVS----RQTENWDP 145

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKK-TDDYELAAIDAIAAAAHSLVI 272
           L+ W+ES  G +  +       +Q    I      M    D   LAA+  +     S +I
Sbjct: 146 LIDWMES-LGARFALAEGVMHVEQPREAIAAFSVHMAGFKDPLALAALHTMTTLMGSAII 204

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           A+ + +G++  E+   +  ++ED  ++ WG
Sbjct: 205 ALAVAKGEISAEKGWAIAHIDEDWTIEHWG 234


>gi|414167312|ref|ZP_11423541.1| hypothetical protein HMPREF9696_01396 [Afipia clevelandensis ATCC
           49720]
 gi|410891129|gb|EKS38927.1| hypothetical protein HMPREF9696_01396 [Afipia clevelandensis ATCC
           49720]
          Length = 257

 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 94/212 (44%), Gaps = 8/212 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           K+FY      E   G G  V LD + ++TP K  L  PT  LA+AI AEWD  Q + I P
Sbjct: 30  KKFYTSAGVAEGPGGFG--VTLDGKQVRTPGKNLLAAPTRDLAEAIAAEWD-AQGEHIDP 86

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MPL +LA + ++ V      + +   K    DL+F RA   + L +    RQ +  DP
Sbjct: 87  MSMPLTRLANSVIDGVAANVQAVADDAAKYLETDLLFYRAGFPDALVA----RQAEHWDP 142

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           +L+W     G   ++       +Q +  +      +  ++ +   A   +     S ++A
Sbjct: 143 VLRWAADSLGAHFILGEGVVHVRQPETAVAAARAAL-PSEAWPAGAFHVVTTMTGSALLA 201

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWGLVE 305
           + +  G L   +      ++ED   +KWG  E
Sbjct: 202 LALKHGILDGSQVWAAAHVDEDWNSEKWGADE 233


>gi|383850317|ref|XP_003700742.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor
           2-like [Megachile rotundata]
          Length = 250

 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 116/242 (47%), Gaps = 18/242 (7%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY +  T     G  + + LD R LKTP  + L++ +  LA AI  EWD Q+ + I  
Sbjct: 5   KRFYRR--TNILSSGGKFEITLDQRKLKTPQGKILQVDSKPLALAIAVEWDMQK-EIIDK 61

Query: 154 FMMPLMKLACTALER-VPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKID 212
             M L  L+ T ++     T+  I+ +++     D +   +   ND +  +++ Q++  D
Sbjct: 62  SSMHLTALSNTVIDNPNNHTKQDIVNYIVNCLEMDTILFHS---ND-SEELYKLQIENWD 117

Query: 213 PLLKWVESEFGFKPVVYSSFFGG--KQEDGLIKTVENLMKKTDDYELAAIDAI---AAAA 267
           PL++W    +    +   S       QE   I T  +LM     Y   A+        A 
Sbjct: 118 PLVQWFCDNYNVNMIKTQSIQAPTISQETKHILT-RHLMS----YNFNAVYGFMYGVDAI 172

Query: 268 HSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLG 327
            S+++ +      + I+EA++  RLEED Q   WG VE  HD +  DL+ ++++A +F+ 
Sbjct: 173 KSVILTLAAAERVISIKEAVKQSRLEEDYQTSHWGSVEWFHDQNKYDLQARLAAAILFVH 232

Query: 328 LS 329
           L+
Sbjct: 233 LN 234


>gi|398406899|ref|XP_003854915.1| hypothetical protein MYCGRDRAFT_99098 [Zymoseptoria tritici IPO323]
 gi|339474799|gb|EGP89891.1| hypothetical protein MYCGRDRAFT_99098 [Zymoseptoria tritici IPO323]
          Length = 368

 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 81/351 (23%), Positives = 146/351 (41%), Gaps = 61/351 (17%)

Query: 30  LCSVATVHQSPQYDDDPTSSFTF------------SSPSDKINESIYIKGRKQETASS-S 76
           +C+   +H +P     P +  T             +SP ++I        RK+  A    
Sbjct: 26  ICARCLLHTTPSKGATPVAHPTVPGPPPKAPQPAATSPDERI-------ARKRALADHIR 78

Query: 77  SSSVTMPMSFMTGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLP--TLG 134
            S  T       GS + KRF++ V  +E  DG G  V+LD R ++T  +R L LP     
Sbjct: 79  QSEQTKVNPAKPGSALQKRFWKNVHVKEDGDG-GLQVLLDTRPVRTADRRILTLPYRKRA 137

Query: 135 LAKAIGAEWD--YQQTDGIRPFMMPLMKLACTALERVPL-------TRPKIIEHLMKKFN 185
           LA AI  EW+        ++   +P+  L   A++            R ++++ +++  +
Sbjct: 138 LAAAIALEWEQLVSAQQALKQHYVPMTSLTSRAIDIQEADKTGETKVREQVVQMVLRYLS 197

Query: 186 QDLVFCRAPADN----------DLTSGVHERQVQKIDPLLKWVESEF----GFKPVVYS- 230
            D + C AP  N               + +RQ +  +P++ ++ +         PV+ + 
Sbjct: 198 TDTLLCWAPEVNIHENFSMQYEGPKKNLRQRQKEAAEPIIAFLTTHVFPGVDIVPVLGAD 257

Query: 231 SFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIF------------- 277
           S     Q    +  + + +     YELAA++    A  SL++A+ +              
Sbjct: 258 SIMPVPQPPETLNVIRSWVSDLAPYELAALERGVLATKSLLVAVRLLVEWSQEWNHLQSV 317

Query: 278 -RGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLG 327
            + K  I+EAI    +E   Q ++WG VE  HD++  DL+ Q+ SA + + 
Sbjct: 318 KKEKFGIDEAIHAATIEVKHQTEQWGEVEDTHDVEKEDLKRQLGSAILLVS 368


>gi|429242044|ref|NP_593355.2| F1-ATPase chaperone Atp12 (predicted) [Schizosaccharomyces pombe
           972h-]
 gi|391358125|sp|Q9UT16.2|ATP12_SCHPO RecName: Full=Protein atp12, mitochondrial; Flags: Precursor
 gi|347834081|emb|CAB57430.2| F1-ATPase chaperone Atp12 (predicted) [Schizosaccharomyces pombe]
          Length = 291

 Score = 82.0 bits (201), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 116/244 (47%), Gaps = 19/244 (7%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLG--LAKAIGAEWDYQQTDGI 151
           +RF++  +T+   +G    + LD R LK+PS + +K+P     LA  I  EWD   +  +
Sbjct: 39  RRFWKNTATK-IQNGEV-LIQLDGRNLKSPSGKIVKVPKEMELLAHLIALEWDRLPSTSV 96

Query: 152 RPFMMPLMKLACTALERVPLTRPK---IIEHLMKKFNQDLVFCRAPADNDLTSGVHERQV 208
           R   +P+  L   A++     + +   +   L++  + D +   +P + +    + E Q 
Sbjct: 97  RQHNLPITSLVSRAIDISQFKKEEKELLSTQLIRFLDTDTILIYSP-ETEYEGKLLEEQK 155

Query: 209 QKIDPLLKWVESEFGFKPVVYSSFFGG-------KQEDGLIKTVENLMKKTDDYELAAID 261
           +   PL +  E++ G    V  S+  G       KQ     + + N +   + ++LAA +
Sbjct: 156 ENWWPLKETFENKLG----VQLSYLDGDAGIIAHKQTQETHERIRNWLSSLNSWQLAAFE 211

Query: 262 AIAAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISS 321
              +   S +++  I +G L  E+A  L  LE   Q ++WG +E  H+ID  DL+ +++S
Sbjct: 212 RSVSCCKSFIVSFMILKGYLNSEKAAALTNLELQYQTNRWGSLEDAHEIDNEDLKNKLAS 271

Query: 322 ATVF 325
           + + 
Sbjct: 272 SAIL 275


>gi|365882305|ref|ZP_09421555.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 375]
 gi|365289390|emb|CCD94086.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 375]
          Length = 260

 Score = 82.0 bits (201), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 98/212 (46%), Gaps = 8/212 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+   T E + G+   V LD R ++TPS R + +P   LA+A+ AEW   Q + I P
Sbjct: 30  KRFYKAAGTAETEGGH--HVTLDGRPIRTPSGRVVVVPVQELAEAVAAEWG-AQGETIDP 86

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MPL + A + ++ V      + E + +    DL+F RA    +L S    R+    DP
Sbjct: 87  ATMPLTRFANSVVQSVVDRVDDVREDMARYLQSDLLFYRAGHPEELVS----REAVHWDP 142

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           +L W     G   ++        Q D  ++   + +  T  + +AA   +     S ++A
Sbjct: 143 VLDWARDSLGAHFILSEGIMHVTQPDAAVQAARDAL-PTGPWAVAAAHVVTTVTGSALLA 201

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWGLVE 305
           + +  G    ++      ++ED  V++WG  E
Sbjct: 202 LALAHGIRDADQVWAAANVDEDWNVEQWGADE 233


>gi|238498972|ref|XP_002380721.1| ATP12 protein, putative [Aspergillus flavus NRRL3357]
 gi|220693995|gb|EED50340.1| ATP12 protein, putative [Aspergillus flavus NRRL3357]
          Length = 781

 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 122/276 (44%), Gaps = 42/276 (15%)

Query: 92  VGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLG--LAKAIGAEWDYQQT- 148
           + KRF++ V  R   +G+ + V+LD R ++TP+K  L +P     LA  I  EWD   + 
Sbjct: 81  LNKRFWKSVDVRIKPEGD-YQVLLDTRPVRTPTKDVLYIPPTKPHLAHLIALEWDVMTSA 139

Query: 149 -DGIRPFMMPLMKLACTALERV-------PLTRPKIIEHLMKKFNQDLVFCRAPADNDLT 200
              ++  M+PL  LA  A + V         TR +I++  M+    D + C  P  ND +
Sbjct: 140 QQALKNHMIPLTSLAARAADIVREDANGETTTRDQIVKTAMRYLETDTLLCWVPEKNDYS 199

Query: 201 -----------SGVHERQVQKIDPLLKWVES----EFGFKPVVYS-SFFGGKQEDGLIKT 244
                        + E Q++    ++ ++ +        +P++ S S     Q       
Sbjct: 200 VEEVDEHGRRPESLREAQMRVAKNVISFLSTMVWPGIEIRPILDSESILPVSQTQATNDI 259

Query: 245 VENLMKKTDDYELAAIDAIAAAAHSLVIAIGIF--------------RGKLQIEEAIELI 290
           ++  +     ++LAA++    A+ SL++A+ +               + K  IEEA E  
Sbjct: 260 IKQWIFGLQAHDLAALERGILASKSLLVAVRLVSEWSENLRHVQRQNQKKFGIEEAAEAS 319

Query: 291 RLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFL 326
            LE   Q D WG VE  HD+D  DL+ Q+ S  V +
Sbjct: 320 SLEVKWQTDMWGEVEDTHDVDKEDLKRQLGSVIVLV 355


>gi|340777613|ref|ZP_08697556.1| ATP12 chaperone protein [Acetobacter aceti NBRC 14818]
          Length = 251

 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 64/240 (26%), Positives = 116/240 (48%), Gaps = 11/240 (4%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRF+ + S   +D  NG+ V+LD + ++ P +  L++ +  LA+A+ AEW     D  + 
Sbjct: 16  KRFWTQASVEPSD--NGFAVLLDGKPVRLPGREILQVQSRALAEALAAEWQAAGMDDPQK 73

Query: 154 FM----MPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQ 209
                 +PL ++A T +ERV   R   ++ L      DL+  RA A + L++    RQ +
Sbjct: 74  RFAADDLPLTRIAGTMIERVTPDRQHSVDTLAGYGEHDLLCYRAEAADPLSA----RQQE 129

Query: 210 KIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHS 269
              P L W+   +G    V        Q    ++ ++ ++ +  D  LAA+     A  S
Sbjct: 130 LWQPWLDWLHETYGVTLTVTHGLMPVPQPSASLEKLKQVLSERSDAILAALGVCVPALGS 189

Query: 270 LVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGLS 329
           L + + +  G+L  E A+ +  L+E  Q+++WG  +  H   IA +   ++ A  F+ L+
Sbjct: 190 LTLGLAVIDGRLDTERAVNIATLDERAQMERWG-EDVAHLDRIATMSADVTDAARFVSLT 248


>gi|406605656|emb|CCH42972.1| hypothetical protein BN7_2518 [Wickerhamomyces ciferrii]
          Length = 311

 Score = 81.6 bits (200), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 118/265 (44%), Gaps = 44/265 (16%)

Query: 95  RFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLG--LAKAIGAEWDYQQTDGIR 152
           +F+ +VS    ++ +   + LD +T++TP    L++PT    LA  +  EW       I+
Sbjct: 52  KFWSQVSIESNENHHA--IKLDNKTIRTPLGNFLEIPTNRSILAHLLHHEWSSLSNLSIK 109

Query: 153 PFMMPLMKLACTA--LERVPLT-----------RPKIIEHLMKKFNQDLVFCRAPA---D 196
              +PL  L      LE   LT           R  IIE L++ F+ D +   AP    +
Sbjct: 110 THNLPLTSLVARVIDLEHANLTKNEELQAKVGIREDIIEDLLRYFDTDTLLVFAPQAEYE 169

Query: 197 NDLTSGVHE------RQVQKIDPL----LKWVESEFGFKPVVYSSFFGGKQEDGLIKTVE 246
             L S   E       Q++K+  +    + W++++ G +        G +Q + +     
Sbjct: 170 GKLRSKQEELYRPIISQIEKLLEIESGSINWLDTDVGLR--------GNQQSENVRSKAR 221

Query: 247 NLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIR------LEEDLQVDK 300
           + +   D ++L A++ +  +A SL+  I   R K   EE + L +      LE   Q +K
Sbjct: 222 SWLLNLDFWDLVALEKVTLSAKSLICGILTLRAKSHGEEIVNLEKIAECATLEVGFQTEK 281

Query: 301 WGLVEGGHDIDIADLRVQISSATVF 325
           WG VE  HD+D  D+R  I+SA + 
Sbjct: 282 WGEVEDTHDVDYQDIRRNINSAGII 306


>gi|119489343|ref|XP_001262882.1| ATP12 chaperone protein, putative [Neosartorya fischeri NRRL 181]
 gi|119411040|gb|EAW20985.1| ATP12 chaperone protein, putative [Neosartorya fischeri NRRL 181]
          Length = 368

 Score = 81.6 bits (200), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 78/302 (25%), Positives = 131/302 (43%), Gaps = 47/302 (15%)

Query: 66  KGRKQETASSSSSSVTMPMSFMTGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSK 125
           +G+    A    S V+ P S +      KRF++ V  R+  DG  + V+LD R ++TP+K
Sbjct: 67  EGKDVNVAGKPQSQVSKPSSTLE-----KRFWKNVDVRKRPDGE-YQVLLDTRPIRTPTK 120

Query: 126 RPLKLPTLG--LAKAIGAEWDYQQT--DGIRPFMMPLMKLACTALERV-------PLTRP 174
             L +P+    LA AI  EWD   +    ++  ++PL  L   A +           TR 
Sbjct: 121 DILSIPSTKPHLAHAIALEWDVMTSARQALKNHLIPLTSLTARAGDIAQEDARGETTTRD 180

Query: 175 KIIEHLMKKFNQDLVFCRAPADNDLT-----------SGVHERQVQKIDPLLKWVESE-- 221
           +I++  M+  + D + C  P  N                + E Q++    ++ ++ ++  
Sbjct: 181 QIVKLAMRYLDTDTLLCWVPEGNPYAGEESEESGERPESLREAQMRVAKDIIAFLGTKVW 240

Query: 222 --FGFKPVVYS-SFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGI-- 276
                 P++ + S     Q       ++  +     ++LAA++    A+ SL++A+ +  
Sbjct: 241 PGVDIVPILDADSILPVSQPRATKDIIKQWVSSLRPHDLAALERGIVASKSLLVAVRVVV 300

Query: 277 -----FR-------GKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATV 324
                FR        K  IEEA E   LE   Q D WG VE  HD+D  DLR Q+ S  V
Sbjct: 301 EWSENFRHLQRSGQKKFGIEEAAEASSLEVRWQTDMWGEVEDTHDVDKEDLRRQLGSVIV 360

Query: 325 FL 326
            +
Sbjct: 361 VV 362


>gi|403366146|gb|EJY82866.1| ATP12 chaperone protein [Oxytricha trifallax]
          Length = 296

 Score = 81.6 bits (200), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 76/280 (27%), Positives = 126/280 (45%), Gaps = 32/280 (11%)

Query: 79  SVTMPMSFM----TGSIVGKRFYEKVS------TREADDGNG---------------WTV 113
           S+  P SF     TG  + KRFY+KV        +EA   N                W V
Sbjct: 7   SIQKPGSFFPQIPTGQRI-KRFYKKVDIVEHPLQKEAPKLNPGQEVSFDNLSLSHKYWAV 65

Query: 114 MLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTD-GIRPFMMPLMKLACTALERVPLT 172
            LD R  KT  K  L +PT  LA A+  EW+ Q+    ++   +          +  P+ 
Sbjct: 66  TLDGRPTKTMFKDNLFIPTKALAIALAEEWEGQKESINLKSLHLNNFMAKTIRSQNDPII 125

Query: 173 RPKIIEHLMKKFNQDLVFCRAP---ADNDLTSGVHERQVQKIDPLLKWVESEFGFKPVVY 229
           +  + E L      D +  R     A+ND   G+ + Q    D + + +E EFG K  ++
Sbjct: 126 QDYMKEELTAILENDQICFRESEEDAENDYKKGLAKTQKAHTDRIFEILEREFGIKLKIF 185

Query: 230 SSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIG-IFRGKLQIEEAIE 288
            S     Q D  ++ ++ +++  D Y L+++ +I+ ++ S  IA+  I R +L I +A+ 
Sbjct: 186 HSIQIDAQ-DSSVQKLQPILQNCDPYVLSSLYSISQSSKSTAIALAFILRSELNIHDAVS 244

Query: 289 LIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGL 328
           + R++E+ Q   +G VEG HD D A  +    +A   + L
Sbjct: 245 IARVDENYQSKHFGKVEGAHDFDEAHSQAVFGTAKNVINL 284


>gi|148256354|ref|YP_001240939.1| hypothetical protein BBta_5031 [Bradyrhizobium sp. BTAi1]
 gi|146408527|gb|ABQ37033.1| hypothetical protein BBta_5031 [Bradyrhizobium sp. BTAi1]
          Length = 260

 Score = 81.6 bits (200), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 8/212 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+ V T   D   G+ V LD R ++TPS R + +P   LA+A+ AEW   Q + I P
Sbjct: 30  KRFYKDVGTAAVD--GGYHVTLDGRPIRTPSGRVVVVPVQALAEAVAAEWQ-AQGEIIDP 86

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MPL + A + ++ V      + E + K    DL+F RA     L +    R+    DP
Sbjct: 87  ATMPLTRFANSVVQSVIDRTDDVREDMAKYLQSDLLFYRAGHPEGLVA----REATHWDP 142

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           +L W     G   ++        Q D  ++   N +  T  + +AA   +     S ++A
Sbjct: 143 VLDWARDTLGAHFILSEGIMHVTQPDAAVQAARNAL-PTGPWAVAAAHVVTTITGSALLA 201

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWGLVE 305
           + + +     ++      ++ED  V++WG  E
Sbjct: 202 LALAQRVRDADQVWAAANVDEDCNVEQWGADE 233


>gi|380022849|ref|XP_003695248.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor
           2-like [Apis florea]
          Length = 248

 Score = 81.3 bits (199), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 65/242 (26%), Positives = 112/242 (46%), Gaps = 18/242 (7%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY K  T        + + LD R LKTP  +  ++ +  LA AI  EWD Q+   I  
Sbjct: 5   KRFYRK--TNILSSSGKYEITLDQRKLKTPQGKIFQVDSKPLALAIATEWDMQK-QIIDK 61

Query: 154 FMMPLMKLACTALER-VPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKID 212
             M L  L  T ++     T+  ++ +++     D +   +   ++L    H+ Q +  D
Sbjct: 62  SNMHLTALCNTVIDNPHNYTKEDMVNYIVNSLEMDTLLFHSSESDEL----HKLQTENWD 117

Query: 213 PLLKWVESEFGFKPVVYSSFFGG--KQEDGLIKTVENLMKKTDDYELAAIDAI---AAAA 267
           PL++W    +    +   S        E  +I T  +LM     Y  +AI        A 
Sbjct: 118 PLVQWFCDNYRVNMIKTQSIIAPTISSETKIILT-RHLM----SYNYSAIYGFMYGVDAI 172

Query: 268 HSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLG 327
            S+++ +      + I+EA++  RLEE+ Q+  WG VE  HD +  DL+ ++++A +F+ 
Sbjct: 173 KSVILTLAAAEEVISIKEAVKQSRLEENYQISHWGSVEWFHDHNKYDLQARLAAAILFVH 232

Query: 328 LS 329
           L+
Sbjct: 233 LN 234


>gi|149187027|ref|ZP_01865334.1| ATP12 ATPase [Erythrobacter sp. SD-21]
 gi|148829316|gb|EDL47760.1| ATP12 ATPase [Erythrobacter sp. SD-21]
          Length = 238

 Score = 81.3 bits (199), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 97/209 (46%), Gaps = 7/209 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+ VST + D   GWTV LD R +KT   +P  +P+  LA+ + AEW   Q + I P
Sbjct: 8   KRFYKDVSTAKTD--LGWTVSLDGRPIKTQGGQPQVVPSEALAEKLAAEWS-GQGETIDP 64

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
                  +   AL+ V   R  ++E L+     D +  RA    D    ++ RQ +  +P
Sbjct: 65  AAFRFRDMTDYALDVVARDRDSLVEKLLGYAETDTLCFRA----DPEEALYRRQQEVWEP 120

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           +L+ +E+  G K    S      Q +G    +   ++  D + L A++ +   A SL I 
Sbjct: 121 ILEGMEAREGVKLHRISGILHRPQIEGTRARLAARLEGLDPFTLTALEQVTLLAASLCIG 180

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           +   +     E   +   LEED Q D WG
Sbjct: 181 LEALQPGADGEALWDAANLEEDWQADLWG 209


>gi|258564100|ref|XP_002582795.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
 gi|237908302|gb|EEP82703.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
          Length = 369

 Score = 81.3 bits (199), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 81/303 (26%), Positives = 135/303 (44%), Gaps = 48/303 (15%)

Query: 68  RKQETASSSSSSVTMPMSFMTGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRP 127
           R+++ AS +  + T P+         KRF++ V  +E  +G  + V+LD R ++TP+K  
Sbjct: 75  RQEKDASPAKGAKTSPLR--------KRFWKDVHVKEVPEG--YQVLLDSRPIRTPAKTI 124

Query: 128 LKLP--TLGLAKAIGAEWD--YQQTDGIRPFMMPLMKLACTALERVP-------LTRPKI 176
           L +P     LA AI  EWD        ++  ++PL  LA  A + +          R +I
Sbjct: 125 LTIPRSKPHLAHAIALEWDQLVSAQQALKHHLIPLTSLAARAEDIIEQDSRNETTIRNEI 184

Query: 177 IEHLMKKFNQDLVFCRAP------ADNDLTSGVHERQVQK--IDPLLKWVESEFG----F 224
           +  LM+  + D +   AP       + D T+    R VQK    P++ ++ +        
Sbjct: 185 LRTLMRYLDTDTLLSWAPEKGPHDVEGDETTAESLRDVQKRTAQPIIGFLTTAVWPGVEI 244

Query: 225 KPVVYS-SFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGI------- 276
           KPV  + S     Q     + +   +     YELA ++    A+ SL+I + +       
Sbjct: 245 KPVFEADSILPISQPQITKEVIRGWISGLPAYELAGLERAVLASKSLLIGVRLIVEWSEY 304

Query: 277 FRG-------KLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGLS 329
           FR           IE+A E+  LE   Q ++WG VE  HD++  DLR Q+ SA + +   
Sbjct: 305 FRDLQPEGPRTFGIEKAAEVSSLEVRWQTEQWGEVEDTHDVEKEDLRRQLGSAILLVSGE 364

Query: 330 RRN 332
           +R 
Sbjct: 365 QRE 367


>gi|153009416|ref|YP_001370631.1| ATP12 ATPase [Ochrobactrum anthropi ATCC 49188]
 gi|151561304|gb|ABS14802.1| ATP12 ATPase [Ochrobactrum anthropi ATCC 49188]
          Length = 260

 Score = 81.3 bits (199), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 102/210 (48%), Gaps = 9/210 (4%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFYEK    E +   G+TV LD R +KTP++  L LPT   A+ +  E+  Q+   I P
Sbjct: 33  KRFYEKAEVAEVE--GGFTVHLDGRPVKTPARNLLLLPTKAAAQIVADEFTAQEK-VIDP 89

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP  +L  TA++ +      + E +++    D++  RA +  +L S    RQ ++ DP
Sbjct: 90  GKMPATRLVNTAIDGIAQDPQAVFEDILRFAGTDMLCYRADSPQELVS----RQTEQWDP 145

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVE-NLMKKTDDYELAAIDAIAAAAHSLVI 272
           L+ W+E   G +  +       +Q    I     +L    D   LA++  +     S +I
Sbjct: 146 LIDWMEG-LGARFSLAEGVMHIEQPREAIAAFGVHLAGFKDPIALASLHTMTTLTGSAII 204

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           A+ I + ++  E+   L  ++ED  ++ WG
Sbjct: 205 ALAIAKDEITAEQGWNLAHIDEDWTIEHWG 234


>gi|254500769|ref|ZP_05112920.1| ATP12 chaperone protein [Labrenzia alexandrii DFL-11]
 gi|222436840|gb|EEE43519.1| ATP12 chaperone protein [Labrenzia alexandrii DFL-11]
          Length = 257

 Score = 80.9 bits (198), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 97/209 (46%), Gaps = 7/209 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+     E +DG  + + LD R +KTP+K  L LPT  L  A+ AEWD Q+ + I P
Sbjct: 30  KRFYKSAEHIETEDG--FAIHLDGRPVKTPAKSTLLLPTEVLGAAVAAEWDAQEKE-INP 86

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MPL ++A +A + V     ++ + +      D +  RA    D    + + Q +  DP
Sbjct: 87  ARMPLTRIANSAQDAVANRFGEVADDITGFAANDALCYRA----DDPESLCDTQRRVWDP 142

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           +++W   +   + V+        Q+  L+      + +     LA +  +     S ++A
Sbjct: 143 VVEWAGDQLSGRFVLIEGIMHTPQDQALLTAFRTRIGEDSPLRLAGLHTVTTLTGSALLA 202

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           + +  G L  +       +EED  +++WG
Sbjct: 203 LALRDGFLDADSVWTAAHVEEDFNIERWG 231


>gi|154248679|ref|YP_001419637.1| ATP12 ATPase [Xanthobacter autotrophicus Py2]
 gi|154162764|gb|ABS69980.1| ATP12 ATPase [Xanthobacter autotrophicus Py2]
          Length = 272

 Score = 80.9 bits (198), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 109/209 (52%), Gaps = 8/209 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY  VS  EAD   G+T++LD R ++TP++  L  PT  LA+A+ AEW  Q+ + I P
Sbjct: 45  KRFYTDVSVGEAD--GGFTILLDGRPVRTPARGLLLAPTRPLAEAMAAEWAEQEKE-INP 101

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
           F MPL +L   AL+RV      + E +++    D++F RA +   L     +RQ ++ DP
Sbjct: 102 FFMPLTRLVNVALDRVGPEAEAVREEVVRYAGSDMLFYRADSPQTLV----KRQAEQWDP 157

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           +L W+      +  +        Q D  ++ V  L+ +    +LAA+ +I     S ++A
Sbjct: 158 VLDWLSGAHDARFFLSEGIRHVTQPDTSLERVRALVPQA-PLKLAAVHSITTLTGSALLA 216

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           + +  G L  + A     ++ED   ++WG
Sbjct: 217 LAVAEGALDADAAWAAAHVDEDFNREQWG 245


>gi|452985810|gb|EME85566.1| hypothetical protein MYCFIDRAFT_40663 [Pseudocercospora fijiensis
           CIRAD86]
          Length = 367

 Score = 80.9 bits (198), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 90/348 (25%), Positives = 151/348 (43%), Gaps = 47/348 (13%)

Query: 25  FRTRHLCSVATVHQSPQYDDDPTSSFTF-----SSPSDKIN--ESIYIKGRKQETASSSS 77
           F  R +C+   +H S      P +  T      S+P   ++  E+   + R+Q      +
Sbjct: 22  FVHRSICAPCLLHTSTAQKATPVAHPTIPGPPPSAPQADVSFPETRVARKRQQAEVLKRA 81

Query: 78  SSVTMPMSFMTGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPT--LGL 135
            + ++  S   GS + KRF++ VS  E + G+   VMLD R ++T +++ L LP     L
Sbjct: 82  QNTSIDPS-KPGSALQKRFWKNVSVMENEHGSL-QVMLDGRPVRTATRQVLTLPKSKRAL 139

Query: 136 AKAIGAEWD--YQQTDGIRPFMMPLMKLACTALERVPL-------TRPKIIEHLMKKFNQ 186
           A +I  EWD        ++   +PL  L   A++            R  +++  M+  + 
Sbjct: 140 AASIALEWDQLVSAQQALKQHYIPLTSLTSRAIDIETADKQGDTKIRENLVKMAMRYLST 199

Query: 187 DLVFCRAPADN-----DLTSGVHERQVQK--IDPLLKWVESEF----GFKPVVYS-SFFG 234
           D + C AP  N     +  + V  RQ QK   +P++ ++ +         PV+   S   
Sbjct: 200 DTLLCWAPEQNRHDPMEQKTKVPLRQRQKNMAEPIIAFLTTHIFPGVDIVPVLAEDSIMP 259

Query: 235 GKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIF---------------RG 279
             Q D   + + N +     ++LAAI+    A  SL+IA  +                + 
Sbjct: 260 ISQSDTTNEVIRNWLSGLSAWDLAAIERCILATKSLLIAARLLVEWSHEWKHVHTAPQKD 319

Query: 280 KLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLG 327
           K  IEEA E   LE   Q ++WG VE  HD++  DLR Q+ SA + + 
Sbjct: 320 KFGIEEAAEAATLEVLHQTEQWGEVEDTHDVEKEDLRRQLGSAVLLVS 367


>gi|301118224|ref|XP_002906840.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262108189|gb|EEY66241.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 233

 Score = 80.9 bits (198), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 58/177 (32%), Positives = 89/177 (50%), Gaps = 14/177 (7%)

Query: 95  RFYEKVSTREA----DDGNG-----WTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDY 145
           RFY  V  ++     D+  G     + V LD +T+KTP ++P++LPT  +A A+  EWD 
Sbjct: 38  RFYNDVGVKDVEESVDETGGEPRKLYAVTLDGKTVKTPRQQPVRLPTRAMAYAVAHEWDA 97

Query: 146 QQTDGIRPFMMPLMKLACTALERV-PLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVH 204
           Q  D IRP  MP+M LA TAL+ V   +  + I+ +M   + D V  +  AD      + 
Sbjct: 98  QSHD-IRPATMPIMTLASTALDLVFTSSSQETIDEMMHYLHTDTVCYQVTADQQ--EKLV 154

Query: 205 ERQVQKIDPLLKWVESEF-GFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAI 260
             Q +K  P+ KW    F G   V + S      +  L+  V   ++K +D+EL A+
Sbjct: 155 ALQQKKWKPIRKWFSDLFKGEVDVSHGSIDPLAHDQQLVANVRAHLEKLNDFELTAM 211


>gi|367471680|ref|ZP_09471285.1| conserved hypothetical protein; putative chaperone required for the
           assembly of the mitochondrial F1-ATPase [Bradyrhizobium
           sp. ORS 285]
 gi|365275999|emb|CCD83753.1| conserved hypothetical protein; putative chaperone required for the
           assembly of the mitochondrial F1-ATPase [Bradyrhizobium
           sp. ORS 285]
          Length = 260

 Score = 80.9 bits (198), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 98/212 (46%), Gaps = 8/212 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+   T EA+ G+   V LD R ++TPS R + +P   LA+A+ AEW   Q + I P
Sbjct: 30  KRFYKDAGTAEAEGGH--HVTLDGRPIRTPSGRVVVVPVRELAEAVAAEWG-AQGETIDP 86

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MPL + A + ++ V      + E + +    DL+F RA        G+ E++    DP
Sbjct: 87  ATMPLTRFANSVVQSVVDRVEDVREDMARYLQSDLLFYRA----GHPEGLVEQEAAHWDP 142

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           +L W     G   ++        Q D  ++     +  T  + +AA   +     S ++A
Sbjct: 143 VLDWARDTLGAHFILSEGIMHVTQPDAAVQAAREAL-PTGPWAVAAAHVVTTVTGSALLA 201

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWGLVE 305
           + +  G    ++      ++ED  +++WG  E
Sbjct: 202 LALAHGIRDADQVWAAANVDEDWNIEQWGADE 233


>gi|261325096|ref|ZP_05964293.1| ATP12 ATPase [Brucella neotomae 5K33]
 gi|261301076|gb|EEY04573.1| ATP12 ATPase [Brucella neotomae 5K33]
          Length = 260

 Score = 80.5 bits (197), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 9/210 (4%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFYEK    E++   G+ V LD R +KTP++  L LPT   A+ +  E+  Q+   I P
Sbjct: 33  KRFYEKAEVAESE--GGFAVHLDGRPVKTPARNLLLLPTRAAAQIVADEFAAQEK-LIDP 89

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP  +L  TA++ +      + E +++    D++  RA +  +L S    RQ +   P
Sbjct: 90  GKMPATRLVNTAIDGIAQDPQAVFEDILRFAGTDMLCYRADSPQELVS----RQTENWAP 145

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKK-TDDYELAAIDAIAAAAHSLVI 272
           L+ W+ES  G +  +       +Q    I      M    D   LAA+  +     S +I
Sbjct: 146 LIDWMES-LGARFALAEGVMHVEQPREAIAAFSVHMAGFKDPLALAALHTMTTLMGSAII 204

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           A+ + +G++  E+   +  ++ED  ++ WG
Sbjct: 205 ALAVAKGEISAEKGWAIAHIDEDWTIEHWG 234


>gi|242824394|ref|XP_002488249.1| mitochondrial molecular chaperone (Atp12), putative [Talaromyces
           stipitatus ATCC 10500]
 gi|218713170|gb|EED12595.1| mitochondrial molecular chaperone (Atp12), putative [Talaromyces
           stipitatus ATCC 10500]
          Length = 393

 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 128/292 (43%), Gaps = 52/292 (17%)

Query: 90  SIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLG--LAKAIGAEWDY-- 145
           S +  RF++ V+ +E+ DG  + ++LD R +++P+K  L +P     LA+AI  EWD+  
Sbjct: 104 SPLKSRFWKDVNVKESSDG--YQILLDTRPVRSPTKAILTVPNTKRHLAEAIALEWDFLT 161

Query: 146 QQTDGIRPFMMPLMKLACTALERVP-------LTRPKIIEHLMKKFNQDLVFCRAPA--- 195
                ++  ++PL  L   A + V          R +I    M+    D + C  P    
Sbjct: 162 SAQQALKQHLIPLTSLTTRATDIVQEDELGQQRIRQEIARTAMRYLETDTLLCWVPERGI 221

Query: 196 DNDLTSG--------VHERQV----QKIDPLLKWVESEFGFKPVV-YSSFFGGKQEDGLI 242
            N L+S         + ++QV    + I+ L + +      KPV+  +S     Q++  +
Sbjct: 222 HNPLSSAAVAPGEETLRDKQVRVAKEIINFLTRTIWPGVEIKPVLDENSILPTPQDETTL 281

Query: 243 KTVENLMKKTDDYELAAIDAIAAAAHSLVIAI-----------------------GIFRG 279
           +T+ N +     YELA ++    A+ SL++A+                       G    
Sbjct: 282 ETIRNWVSGLPAYELAGLERAILASKSLLVAVRLVVEWGEHFSSLQETLHQQYEEGKQVS 341

Query: 280 KLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGLSRR 331
           +  +EEA     LE   Q + WG VE  HD+D  DLR Q+ S  + +   R+
Sbjct: 342 RFGVEEAARASSLEVTHQTEMWGEVEDTHDVDREDLRRQLGSVILLVSGDRK 393


>gi|317156020|ref|XP_001825519.2| ATP12 chaperone protein [Aspergillus oryzae RIB40]
          Length = 360

 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 85/351 (24%), Positives = 146/351 (41%), Gaps = 56/351 (15%)

Query: 27  TRHLCSVATVHQSPQYDDDPTSSFTFSSPSDKINESIYIKGR--KQETASSSSSSVTMPM 84
           +R + S+AT H +       + SF FS     I   +   G   K  +A+   + +  P 
Sbjct: 12  SRRIVSIATRHNTAI-----SRSFHFSPSKTAIAHPVTAHGPPPKAPSAALEYNELMRPQ 66

Query: 85  S-------FMTGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLG--L 135
                       + + KRF++ V  R   +G+ +  +LD R ++TP+K  L +P     L
Sbjct: 67  DGNELHTRTAKPTPLNKRFWKSVDVRIKPEGD-YQALLDTRPVRTPTKDVLYIPPTKPHL 125

Query: 136 AKAIGAEWDYQQT--DGIRPFMMPLMKLACTALERV-------PLTRPKIIEHLMKKFNQ 186
           A  I  EWD   +    ++  M+PL  LA  A + V         TR +I++  M+    
Sbjct: 126 AHLIALEWDVMTSAQQALKNHMIPLTSLAARAADIVREDANGETTTRDQIVKTAMRYLET 185

Query: 187 DLVFCRAPADNDLT-----------SGVHERQVQKIDPLLKWVESE----FGFKPVVYS- 230
           D + C  P  ND +             + E Q++    ++ ++ +        +P++ S 
Sbjct: 186 DTLLCWVPEKNDYSVEEVDEHGRRPESLREAQMRVAKNVISFLSTMVWPGIEIRPILDSE 245

Query: 231 SFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIF------------- 277
           S     Q       ++  +     ++LAA++    A+ SL++A+ +              
Sbjct: 246 SILPVSQTQATNDIIKQWIFGLQAHDLAALERGILASKSLLVAVRLVSEWSENLRHVQRQ 305

Query: 278 -RGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLG 327
            + K  IEEA E   LE   Q D WG VE  HD+D  DL+ Q+ S  V + 
Sbjct: 306 NQKKFGIEEAAEASSLEVKWQTDMWGEVEDTHDVDKEDLKRQLGSVIVLVS 356


>gi|398384719|ref|ZP_10542747.1| chaperone required for the assembly of F1-ATPase [Sphingobium sp.
           AP49]
 gi|397721999|gb|EJK82544.1| chaperone required for the assembly of F1-ATPase [Sphingobium sp.
           AP49]
          Length = 231

 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 91/209 (43%), Gaps = 7/209 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+ V+    +   G+ + LD R ++TP++  L LP   LA+A+  EW   Q + + P
Sbjct: 2   KRFYKDVTVEPVE--AGFAIRLDGRAVRTPARAELALPNAVLAEAVAQEW-RDQGETVDP 58

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             M    LA  A++ +   R K    + +    D++  RA       +    RQ    DP
Sbjct: 59  ATMAFTGLANAAIDHIVDNRAKFAADIAEYGGTDMLCYRAEGPEVFVA----RQAAAWDP 114

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           LL W  + +    V         Q D  ++ +  ++   D + LA +  +   + SLV  
Sbjct: 115 LLDWARTRYDVAFVTTRGIIHVAQPDETLERLSAVVDAFDPFTLAGLSRLVTLSGSLVCG 174

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           + +  G   ++       ++E  Q ++WG
Sbjct: 175 LAVLEGAFDVDTIWAATEIDERWQAEQWG 203


>gi|381203580|ref|ZP_09910686.1| ATP synthase mitochondrial F1 complex assembly factor 2
           [Sphingobium yanoikuyae XLDN2-5]
          Length = 231

 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 89/209 (42%), Gaps = 7/209 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+ V+    +   G+ + LD R ++TP++  L LP   LA+A+  EW   Q + + P
Sbjct: 2   KRFYKDVTVEPVE--GGFAIRLDGRPVRTPARAELALPNAVLAEAVAQEW-RDQGETVDP 58

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             M    LA  A++ +   R K    + +    D++  RA       +    RQ    DP
Sbjct: 59  ATMAFTGLANAAIDHIAGNRAKFAADIAEYGGTDMLCYRAEGPEAFVA----RQAAAWDP 114

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           LL W  + +    V         Q D  ++ +   +   D + LA +  +   + SLV  
Sbjct: 115 LLDWASARYDVAFVTTQGIIHVAQPDATLERLAAAVDGLDPFTLAGLSRLVTLSGSLVCG 174

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           + +       +   E   ++E  Q ++WG
Sbjct: 175 LAVLEEAFDADSVWEAAEIDERWQAEQWG 203


>gi|170036765|ref|XP_001846232.1| ATP synthase mitochondrial F1 complex assembly factor 2 [Culex
           quinquefasciatus]
 gi|167879675|gb|EDS43058.1| ATP synthase mitochondrial F1 complex assembly factor 2 [Culex
           quinquefasciatus]
          Length = 263

 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 67/250 (26%), Positives = 112/250 (44%), Gaps = 28/250 (11%)

Query: 94  KRFYEKVSTREADDGNG-WTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIR 152
           KRFY K     +   NG + + LD R LKTP   P  + +  LA A+  EWD Q+ + I 
Sbjct: 19  KRFYRKTGIISS---NGRYEITLDQRKLKTPKGAPFYVESEPLAVAVATEWDAQK-ETID 74

Query: 153 PFMMPLMKLACTALERVP-LTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKI 211
              M L  L+ T L+    L +  I+ +L+   + D +   +  +  L     E Q+ + 
Sbjct: 75  RSSMHLTALSSTVLDNPSGLKKMDIVNYLVNYISTDAILYHSSHEQRLK----ELQLAEW 130

Query: 212 DPLLKWVESEFGFKPVVYSSFFGGKQEDGL------IKTVENLMKKTDDYELAAIDAIAA 265
            P++ W    +  +          K  DGL        T  N+ +    Y  AA++    
Sbjct: 131 SPIVDWFNKRYDVEL---------KATDGLEVPSFPPGTAMNISRYLSSYNEAALNGFMF 181

Query: 266 AA---HSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSA 322
           A     S+V+        + +E+A+ L RLEE+ Q+  WG VE  HD+   + + ++S+A
Sbjct: 182 AVDTIKSVVLTCACMDRFISVEKAVLLARLEEEYQLGHWGRVEWAHDMQQLESQARLSAA 241

Query: 323 TVFLGLSRRN 332
            +F+  +  N
Sbjct: 242 VMFVYFNSSN 251


>gi|254470461|ref|ZP_05083865.1| ATP12 ATPase [Pseudovibrio sp. JE062]
 gi|211960772|gb|EEA95968.1| ATP12 ATPase [Pseudovibrio sp. JE062]
          Length = 264

 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 100/209 (47%), Gaps = 7/209 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFYE+VS  + DD   + V+LD R++KTP +  L      +A+ + AEW+ Q+ + I P
Sbjct: 33  KRFYERVSVEQKDDV--YAVLLDGRSIKTPGRNALVFKDEVIAEGVAAEWELQEEE-IDP 89

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MPL ++A +A++ V      + + + +    D +  RA +  +L      RQ  + DP
Sbjct: 90  GTMPLTRIAHSAIDAVEEKFADVADEITRYAGNDHLCYRADSPAELVG----RQTAQWDP 145

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           +L W E     +  +        Q++ +       + K D  +LAAI  + +   S ++A
Sbjct: 146 VLGWAEKLLDGRFKLVEGIMHVAQDEAVTAAYRAELDKYDALQLAAIHTVTSICGSALLA 205

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           + +       +       ++ED  +++WG
Sbjct: 206 LALAEKAFDADAVWSAAHVDEDWNIEQWG 234


>gi|242007937|ref|XP_002424771.1| ATP synthase mitochondrial F1 complex assembly factor 2, putative
           [Pediculus humanus corporis]
 gi|212508294|gb|EEB12033.1| ATP synthase mitochondrial F1 complex assembly factor 2, putative
           [Pediculus humanus corporis]
          Length = 239

 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 109/219 (49%), Gaps = 13/219 (5%)

Query: 113 VMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRPFMMPLMKLACTALER-VPL 171
           V LD R LKTP  +   + +  LA A+ AEWD Q+T+ I P  M L  L  T L+     
Sbjct: 13  VTLDQRKLKTPKGKLFYVESEPLALAVAAEWDRQKTN-IVPSSMHLTGLCYTVLDNPNKF 71

Query: 172 TRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDPLLKWVESEFGFKPVVYSS 231
           T+ +I+ +++K  + D +   +  +++L    ++ Q+++  P+L W   +F         
Sbjct: 72  TKEEIVNNIIKYLDTDTILYTSGEEDEL----YDLQLKEWQPILNWFCKKFDISIESSKD 127

Query: 232 FFGGKQEDGLIKTVENLMKKTDDYELAAIDAI---AAAAHSLVIAIGIFRGKLQIEEAIE 288
             G K     ++  + L K    Y L A+        A  S+++ I      + +E+A+ 
Sbjct: 128 ISGPKIS---MEAKDVLRKYLLSYNLWAVHGFIFTIEALKSVILGITCAERYISVEKAVY 184

Query: 289 LIRLEEDLQVDK-WGLVEGGHDIDIADLRVQISSATVFL 326
           L RLEE+ QV K WG +E  H+++  D + ++++  +F+
Sbjct: 185 LSRLEEEYQVGKRWGRIEWSHELNQQDTQARVAAGILFI 223


>gi|358385001|gb|EHK22598.1| hypothetical protein TRIVIDRAFT_28258 [Trichoderma virens Gv29-8]
          Length = 364

 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 74/278 (26%), Positives = 116/278 (41%), Gaps = 47/278 (16%)

Query: 92  VGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKR-----PLKLPTLGLAKAIGAEWDY- 145
           V KRF+++V+ RE D      V LD R L+ P+ +     PL  P L  A A+  EWD  
Sbjct: 83  VAKRFWKEVTVREVD--GALQVHLDARPLRHPNTKAIIRLPLSKPNL--ASALALEWDIL 138

Query: 146 -QQTDGIRPFMMPLMKLACTALE----------RVPLTRPKIIEHLMKKFNQDLVFCRAP 194
                  +  ++PL  L C AL+               R  I   +++  + D + C AP
Sbjct: 139 TSAQQATKQHLIPLTSLICRALDILDDDASNGPEATKIRTTITNTVLRYLDTDSLLCWAP 198

Query: 195 A----DNDLTSGVHERQVQK------IDPLLKWVESEFGFKPVV-YSSFFGGKQEDGLIK 243
                D    +G   R VQK      +  L   V      +PV+   S    +Q +G+ +
Sbjct: 199 PAGPHDRRNDAGESLRDVQKKAAEETVSYLTTNVWPGITIEPVLDGHSIMPREQSEGVRE 258

Query: 244 TVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFR---------------GKLQIEEAIE 288
            V+  +   D +E+A ++    A  S V A  I                 G+  +E A +
Sbjct: 259 VVQGWVMGLDAWEIAGLERAVLAGKSFVAAARIVAEWSEGPVGTGHAVPVGQFSVEHASK 318

Query: 289 LIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFL 326
              LE D Q ++WG VE  HD++  D+R Q+ S  + +
Sbjct: 319 ATSLEVDWQAEQWGEVEDTHDVNQEDVRRQLGSVVLLV 356


>gi|390169268|ref|ZP_10221209.1| ATP synthase mitochondrial F1 complex assembly factor 2
           [Sphingobium indicum B90A]
 gi|389588131|gb|EIM66185.1| ATP synthase mitochondrial F1 complex assembly factor 2
           [Sphingobium indicum B90A]
          Length = 231

 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 94/209 (44%), Gaps = 7/209 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFYE  +    +  +G+ + LD R ++TP++ PL LPT GLA+AI  EW   Q + + P
Sbjct: 2   KRFYEDAAVVAGE--SGFEIRLDGRPVRTPARAPLALPTQGLAEAIAEEW-RAQGETVDP 58

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP   LA  A++++          + +    DL+  RA    +L +    R+    DP
Sbjct: 59  RSMPFTGLANGAIDQIAPHSGSFAAGIARYAESDLLCYRAEGPAELVA----REAAAWDP 114

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           LL W  + +     V        Q    ++ +   +   D + LA +  +   + SLV  
Sbjct: 115 LLDWAMARYDVAFRVTQGVVPVAQPARTLERLAAAVAAFDPFTLAGLSTLVTLSGSLVCG 174

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           + +  G    +       ++E  +V++WG
Sbjct: 175 LAVVEGGHDADLIWTAAEIDEAWEVEQWG 203


>gi|108755244|emb|CAK32564.1| hypothetical protein 10D02-30 [uncultured organism]
          Length = 245

 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 104/216 (48%), Gaps = 12/216 (5%)

Query: 94  KRFYEKVSTREAD-------DGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQ 146
           KRFYE+ +             G+G+ V+LD R +KTP+K  L LP+L LA+A+ AEW  Q
Sbjct: 7   KRFYERAAAEPCPPSEGGTRGGDGFRVVLDGRPIKTPAKADLVLPSLALAEAVAAEWQAQ 66

Query: 147 QTDGIRPFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHER 206
             + +    + L  LA TA++RV   R +++E +      DLV  R     +  + +   
Sbjct: 67  GAE-VEVRSLALTGLAWTAIDRVGSDRARVVEEVAAYAAHDLVCYR----AEAPAELAAL 121

Query: 207 QVQKIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAA 266
           Q     PLL W    F  +  V +      Q    +  +   +    D EL A++A   A
Sbjct: 122 QQAVWQPLLDWAALSFEARLAVTAGVVPIAQPPEALAALRQAVAAKSDLELTALNAAVTA 181

Query: 267 AHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           A SLVI + +  G++    A E  +L+E  Q+++WG
Sbjct: 182 AGSLVIGLALGAGRIDAAAAFEAAQLDESYQIERWG 217


>gi|324520107|gb|ADY47562.1| ATP synthase F1 complex assembly factor 2 [Ascaris suum]
          Length = 274

 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/222 (27%), Positives = 106/222 (47%), Gaps = 9/222 (4%)

Query: 111 WTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRPFMMPLMKLACTALER-V 169
           + + LD R LKTPS + L++ +  LA AI  EW+  Q   +    M L  L  TAL+   
Sbjct: 47  YNIYLDDRKLKTPSGKALEIESEALALAIAQEWN-NQKKYLNISHMRLTGLLFTALDNPY 105

Query: 170 PLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDPLLKWVESEF--GFKPV 227
            + +  I+  +++  + D +  RA  +  L +     Q QK DP+++W  +EF    KP 
Sbjct: 106 SIKKEDIVSKILEYLDGDTILFRAGENEKLDA----LQRQKWDPIIEWANTEFELTLKPS 161

Query: 228 VYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAI 287
            YS   G   E      ++  +       L  I     +  SL+I + +   +  +E+A+
Sbjct: 162 -YSIVDGPIIEAESRNRLQRYLLAYGFLSLTGIQYAVESVKSLLITLSVMGYRTDVEDAV 220

Query: 288 ELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGLS 329
           ++  LE+  Q   WG VE  HD++  +L  ++S+  +F  L+
Sbjct: 221 DMALLEQIFQSKIWGNVEWAHDVEREELISRLSAGILFAHLT 262


>gi|334343951|ref|YP_004552503.1| ATP12 ATPase [Sphingobium chlorophenolicum L-1]
 gi|334100573|gb|AEG47997.1| ATP12 ATPase [Sphingobium chlorophenolicum L-1]
          Length = 231

 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 7/209 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+ VS    +   G+ + LD R ++TP++ PL LP   LA+AI  EW   Q D + P
Sbjct: 2   KRFYKNVSVVPGE--TGYEIQLDDRPVRTPARAPLTLPNARLAEAIAEEW-RAQGDTVDP 58

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP   LA  A++++          + +    DL+  RA    +L +    R+    DP
Sbjct: 59  RSMPFTGLANGAIDQIAPQSDSFAAGIARYGESDLLCYRAEGPAELVA----REAAAWDP 114

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           LL W    +     V        Q    ++ +   +   D + LA + A+   + SLV  
Sbjct: 115 LLDWARRRYDVTFRVTQGIIPVDQPAETLERLAAAVAAFDPFTLAGLSALVTLSGSLVCG 174

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           + +  G    +       ++E  ++++WG
Sbjct: 175 LAVVEGGHDGDAIWTAAEIDEAWEIEQWG 203


>gi|310791079|gb|EFQ26608.1| ATP12 chaperone [Glomerella graminicola M1.001]
          Length = 384

 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 79/277 (28%), Positives = 114/277 (41%), Gaps = 40/277 (14%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTP-SKRPLKLPT--LGLAKAIGAEWDY--QQT 148
           +RF+  V+ +E D      V LD R L+ P +K  ++LP     LA A+  EWD+     
Sbjct: 110 RRFWNDVNVQEVD--GALQVHLDNRPLRHPNTKEIMRLPVSKQHLASALAIEWDFITSAQ 167

Query: 149 DGIRPFMMPLMKLACTALERVP------LTRPKIIEHLMKKFNQDLVFCRAPA----DND 198
              +  M+PL  L C AL+           R  I   LM+  + D + C AP     D  
Sbjct: 168 QATKQHMIPLTSLTCRALDIAEDDAASGAIRQSIATTLMRYLDTDSLLCWAPPAGPLDTR 227

Query: 199 LTSGVHERQVQK------IDPLLKWVESEFGFKPVVYS-SFFGGKQEDGLIKTVENLMKK 251
             +G   R VQK      I  L   V       PV+   S     Q +G+ + V+  +  
Sbjct: 228 NDAGESLRDVQKRTAEEVIGFLTARVWPGIEIHPVLDGHSIVPRAQAEGVREVVQGWVMG 287

Query: 252 TDDYELAAIDAIAAAAHSLVIA-----------IGIFRG-----KLQIEEAIELIRLEED 295
            D +EL  ++    A  SL+ A           +G  R      K  IEEA     LE  
Sbjct: 288 LDPWELTGLERAVLAGKSLITAARLVTEWSEGPVGECRDPESPRKFGIEEAATAASLEVS 347

Query: 296 LQVDKWGLVEGGHDIDIADLRVQISSATVFLGLSRRN 332
            Q+  WG VE  HD++  DLR Q+ S  + +  + R 
Sbjct: 348 WQIGSWGEVEDTHDVEKEDLRRQLGSVVLLVSGTNRK 384


>gi|340992603|gb|EGS23158.1| NONE-like protein [Chaetomium thermophilum var. thermophilum DSM
           1495]
          Length = 403

 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 77/323 (23%), Positives = 132/323 (40%), Gaps = 57/323 (17%)

Query: 65  IKGRKQETASSSSSSVTMPMSFMTGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTP- 123
           I  RK++      ++   P S   G  V KRF++ V  RE +    + + LD R L+ P 
Sbjct: 83  IARRKRQAELLRQATGLSPSSSYRGKTVRKRFWKDVHVREVN--GAYEIHLDTRPLRHPH 140

Query: 124 SKRPLKLP--TLGLAKAIGAEWD--YQQTDGIRPFMMPLMKLACTALERV--------PL 171
           +K  ++LP     LA ++  EWD         +  ++PL  L C AL+          P 
Sbjct: 141 TKSVIRLPLSKPNLAHSLAVEWDSLLSAQHATKQHLIPLTALTCRALDIAADDASPAGPT 200

Query: 172 TRPKIIEHLMKKFNQDLVFCRAP----------------ADNDLTSGVHERQVQKIDPLL 215
            RP++I  L++  + D + C  P                 +N   + +H+ Q Q    + 
Sbjct: 201 IRPQVISLLLRYLDTDSLLCWVPRPGALNVSEAPEEEGKENNGQPTCLHDLQEQTYQRVT 260

Query: 216 KWVESEFG----FKPVV-YSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSL 270
            ++ S         PV+  +S     Q  G  + V+  +     +ELA ++    A  SL
Sbjct: 261 GYLTSRLWPGTEIVPVLDGASILPRHQPPGTREVVKGWIAGLSAFELAGLERATLAGKSL 320

Query: 271 VIAIGI---------FRGK------------LQIEEAIELIRLEEDLQVDKWGLVEGGHD 309
           + A  +         FR +              +EE  + + LE D Q   WG VE  HD
Sbjct: 321 LAAARLVAEWSEESPFRWQGIVNASQEDAEFFGVEECAKAVNLEVDWQTRNWGEVEDTHD 380

Query: 310 IDIADLRVQISSATVFLGLSRRN 332
           ++  +LR Q++S  + +  + R+
Sbjct: 381 VEKEELRRQLASVVLLVSGTGRS 403


>gi|453086979|gb|EMF15020.1| ATP12-domain-containing protein [Mycosphaerella populorum SO2202]
          Length = 372

 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 93/366 (25%), Positives = 149/366 (40%), Gaps = 54/366 (14%)

Query: 12  SIRNPNAISSFTTFRTRHLCSVATVHQSPQYDDDPTSSFTFSSP-------SDKINESIY 64
           S+R  ++++    +R   +C+   +H S      P S  T   P       S    ES  
Sbjct: 11  SLRAASSLARSHQYRPSPICA-RCLHTSGSKSATPVSHPTVLGPPPSAPEKSPLHPESRL 69

Query: 65  IKGRKQ-ETASSSSSSVTMPMSFMTGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTP 123
            + R+Q E      +S T P      S + KRF++ V+  E  DG G  +MLD R ++T 
Sbjct: 70  ARKREQLELVKQGRNSRTDPAK--PTSALQKRFWKNVAVAETKDG-GLQIMLDSRPVRTA 126

Query: 124 SKRPLKLPT--LGLAKAIGAEWD--YQQTDGIRPFMMPLMKLACTALE-----RV--PLT 172
           +K  L LP     LA AI  EWD        ++   +PL  L   AL+     R      
Sbjct: 127 TKEVLTLPKSKRALAAAIAIEWDQLVSAQQALKQHYIPLTSLTSRALDIEIADRAGDSTI 186

Query: 173 RPKIIEHLMKKFNQDLVFCRAPADNDL-----------TSGVHERQVQKIDPLLKWVESE 221
           R  I++  ++    D + C AP  N             T  +  RQ    +P++ ++ + 
Sbjct: 187 RENIVKMALRYLATDTLLCWAPESNPHDNHPGAMQQRSTKNLRARQRAIAEPIIAFLTTH 246

Query: 222 F--GFK--PVVYS-SFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGI 276
              G +  PV+   S     Q +   + +   +     ++LAA++    A  SL IA+ +
Sbjct: 247 IFPGVEIVPVLSEDSIMPLPQPEMTTQVISGWLAGLSAFDLAAVERAILATKSLTIAVRL 306

Query: 277 F---------------RGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISS 321
                           + K  I  A E   LE   Q ++WG VE  HD++  DLR Q+ S
Sbjct: 307 LVEWSSEWKSLHNAPGKDKFGISHAEEASSLEVLHQTEQWGEVEDTHDVEKEDLRRQLGS 366

Query: 322 ATVFLG 327
           A + + 
Sbjct: 367 AILLVS 372


>gi|85715099|ref|ZP_01046083.1| Chaperone required for the assembly of F1-ATPase [Nitrobacter sp.
           Nb-311A]
 gi|85698014|gb|EAQ35887.1| Chaperone required for the assembly of F1-ATPase [Nitrobacter sp.
           Nb-311A]
          Length = 260

 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 102/212 (48%), Gaps = 8/212 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           +RFY   S +E  +G  + ++LD + ++TPS+  L  P   +A+AI  EWD Q+ D I P
Sbjct: 29  QRFYACASVKETPEG--FAILLDDKPVRTPSRNVLAAPARAIAEAIAVEWDAQR-DVINP 85

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MPL +LA + ++ V      ++E + K    DL+F RA   + L +    R+    DP
Sbjct: 86  MTMPLTRLANSVIDGVAGRVDVVVEDIAKYLETDLLFYRAGHPDGLVA----RESVHWDP 141

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           +L W       + ++        Q D  +      +  +D + + A+  +     S ++A
Sbjct: 142 VLLWAAEALEARFILSEGIVHVCQPDQAVAAARKAL-PSDPWMVGALHVVTTLTGSALLA 200

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWGLVE 305
           I + RG+L   E      ++ED   ++WG+ E
Sbjct: 201 IALMRGRLDAGEVWAAAHVDEDWNSEQWGVDE 232


>gi|427408842|ref|ZP_18899044.1| hypothetical protein HMPREF9718_01518 [Sphingobium yanoikuyae ATCC
           51230]
 gi|425713152|gb|EKU76166.1| hypothetical protein HMPREF9718_01518 [Sphingobium yanoikuyae ATCC
           51230]
          Length = 231

 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 89/209 (42%), Gaps = 7/209 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+ V+    +   G+ + LD R ++TP++  L LP   LA+A+  EW   Q + + P
Sbjct: 2   KRFYKDVTVEPVE--AGFAIRLDGRPVRTPARAELALPNAVLAEAVAQEW-RDQGETVDP 58

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             M    LA  A++ +   R K    + +    D++  RA       +    RQ    DP
Sbjct: 59  ATMAFTGLANAAIDHIAGNRAKFAADIAEYGGTDMLCYRAEGPEAFVA----RQAAAWDP 114

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           LL W  + +    V         Q D  ++ +   +   D + LA +  +   + SLV  
Sbjct: 115 LLDWARARYDVAFVTTQGIIHVAQPDATLERLAAAVDGLDPFTLAGLSRLVTLSGSLVCG 174

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           + +       +   E   ++E  Q ++WG
Sbjct: 175 LAVLEEAFDADSVWEAAEIDERWQAEQWG 203


>gi|320583652|gb|EFW97865.1| F1-ATP synthase assembly protein [Ogataea parapolymorpha DL-1]
          Length = 304

 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 122/268 (45%), Gaps = 41/268 (15%)

Query: 95  RFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPT--LGLAKAIGAEWDYQQTDGIR 152
           +F+EKV   E DDG  + ++LD +++KTP    L +P     LA  +  EW +  +  I+
Sbjct: 39  KFWEKVDLAEKDDG--YHILLDGKSIKTPLGFQLTVPKNKHTLAYLLAHEWKHLPSLQIK 96

Query: 153 PFMMPLMKLA--CTALERVP-------LTRPKIIEHL----MKKFNQDLVFCRAPADNDL 199
           P+++PL  L   C  LE+         LT+    E+L    ++  + D +   +PA  D 
Sbjct: 97  PYLVPLTSLVSRCIDLEQSHNKQDAELLTKVGDKENLKALLLRYLDTDTLLVFSPA-KDC 155

Query: 200 TSGVHERQVQKIDPLLKWVESEFGFKPVVYSS--------------FFGGKQEDGLIKTV 245
              + E Q Q   P++K +E EF F+P   +                 G KQ +  +K V
Sbjct: 156 DGKLREAQEQTYRPIIKSME-EF-FQPYAENGEEVKLTYMDSDVHGLVGNKQPEATVKAV 213

Query: 246 ENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGK-------LQIEEAIELIRLEEDLQV 298
              +   D + L +++     A S +  + I R         L +++      LE   Q 
Sbjct: 214 RKWLDTLDFWSLVSLEKATLTAKSFLSGVAILRLNNKQDQIDLTVDDIARAATLETIYQT 273

Query: 299 DKWGLVEGGHDIDIADLRVQISSATVFL 326
           ++WG VE  HD+D  D++  ++SA++ +
Sbjct: 274 ERWGEVEDTHDVDKVDVQRNLTSASLIV 301


>gi|347761707|ref|YP_004869268.1| ATP synthase F1 mitochondrial assembly chaperone [Gluconacetobacter
           xylinus NBRC 3288]
 gi|347580677|dbj|BAK84898.1| ATP synthase F1 mitochondrial assembly chaperone [Gluconacetobacter
           xylinus NBRC 3288]
          Length = 254

 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 99/212 (46%), Gaps = 8/212 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDY---QQTDG 150
           +RF+ +       +G G+TV LD R ++ P    L + +  LA AI  EW     ++   
Sbjct: 18  RRFWAQACIAAVAEG-GFTVELDGRGIRLPGGAALVVQSEALASAIAGEWAAAGGEKGGH 76

Query: 151 IRPFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQK 210
             P  +P+ ++A T +ERV       +  L++  + +L+  RA    D  + +  RQ + 
Sbjct: 77  FTPDDLPMTRIAGTMIERVAPDPMAQVAALLQYVDGELLCYRA----DYPAQLCARQHEL 132

Query: 211 IDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSL 270
            DP L W+ +  G    V +      Q +G+      L+   D+  LAA+  +  A  S+
Sbjct: 133 WDPQLAWLRARHGIDMTVTTGIMPLVQAEGVHAAWRTLVAAQDNATLAALGVMVPAMKSI 192

Query: 271 VIAIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           V+ + +  G L   +A ++  ++E  Q+D WG
Sbjct: 193 VLGLAVVTGALSAAKAADIATVDERTQMDIWG 224


>gi|291238158|ref|XP_002739002.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor
           2-like [Saccoglossus kowalevskii]
          Length = 261

 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 60/245 (24%), Positives = 107/245 (43%), Gaps = 41/245 (16%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+ VS  + D  + + + LD R LKTP      +P   LA A+  EWD Q       
Sbjct: 34  KRFYKNVSVTQND--SIFEINLDNRKLKTPMGNIFTVPNEPLAIAVATEWDSQ------- 84

Query: 154 FMMPLMKLACTALERVPLTRPKIIE-HLMKKFNQDLVFCRAPADNDLTSGVHER------ 206
                                K+I+ H M   ++ L  C+  +   + S   E       
Sbjct: 85  --------------------AKLIQRHTMYLVSKILNICKYFS---IISSFREEEPPEFY 121

Query: 207 --QVQKIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIA 264
             Q ++ DP+L+WV   +       +S  G +         +  +   + + +   ++  
Sbjct: 122 ALQQKEWDPVLEWVNRRYEVNIESTTSLMGPEITQKTQDKFKQHLLSYNSWAIVGYESAV 181

Query: 265 AAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATV 324
               SL++   +    + +++A++L RLE   Q  +WG VE  HD+D ADL+ ++++AT+
Sbjct: 182 QCLKSLILTAALIDRCISVDQAVDLSRLEFTYQTQRWGRVEWSHDLDEADLKARVAAATL 241

Query: 325 FLGLS 329
           F+ L+
Sbjct: 242 FVHLA 246


>gi|110761779|ref|XP_397155.3| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor
           2-like [Apis mellifera]
          Length = 247

 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 64/244 (26%), Positives = 116/244 (47%), Gaps = 22/244 (9%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY K  T        + + LD R LKTP  +  ++ +  LA A+  EWD Q+   I  
Sbjct: 5   KRFYRK--TNILSSSGKYEITLDQRKLKTPQGKIFQVDSKPLALAVATEWDMQK-QIIDK 61

Query: 154 FMMPLMKLACTALER-VPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKID 212
             M L  L  T ++     T+  ++ +++     D +   +  +++L    H+ Q +  D
Sbjct: 62  SNMHLTALCNTVIDNPHNHTKEDMVNYIVSSLEMDTLLFHSNENDEL----HKLQTENWD 117

Query: 213 PLLKWVESEFGFKPVVYSSFFGG--KQEDGLIKTVENLMKKTDDYE-----LAAIDAIAA 265
           PL++W    +    +   S        E  +I T  +LM  + +Y      +  +DAI  
Sbjct: 118 PLVQWFCDNYRVNMIKTQSIVAPTISSETKIILT-RHLM--SYNYNAVYGFMYGVDAIK- 173

Query: 266 AAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVF 325
              S+++ +      + I+EA++  RLEE+ Q+  WG VE  HD +  DL+ ++++A +F
Sbjct: 174 ---SVILTLAAAERIISIKEAVKQSRLEENYQISHWGSVEWFHDHNKYDLQARLAAAILF 230

Query: 326 LGLS 329
           + L+
Sbjct: 231 VHLN 234


>gi|154253211|ref|YP_001414035.1| ATP12 ATPase [Parvibaculum lavamentivorans DS-1]
 gi|154157161|gb|ABS64378.1| ATP12 ATPase [Parvibaculum lavamentivorans DS-1]
          Length = 271

 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 111/240 (46%), Gaps = 15/240 (6%)

Query: 92  VGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGI 151
           V KRFY+K      + G+   ++LD R +KTP+K PL +P L LA+AI  EW+ Q  + I
Sbjct: 41  VLKRFYKKAEAGPHEKGHA--ILLDGRAVKTPAKEPLAVPVLALARAIADEWEAQAEE-I 97

Query: 152 RPFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKI 211
            P  M L KLA TA++ V   R  +I  L+     DL+  R     D  + +  RQ    
Sbjct: 98  DPRAMKLTKLANTAIDLVAPRREAVIAELVNFAATDLLCYR----ADAPAALAARQAAAW 153

Query: 212 DPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLV 271
           +PLL W   + G +  V +      Q++  +      +   D + +A +        S +
Sbjct: 154 EPLLAWAAGQ-GIRLRVTTGLMHVPQDEAALDAYGASVAALDPFRIAGLHNAVTLTGSAI 212

Query: 272 IAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADL---RVQISSATVFLGL 328
           I + +  G +  E A E   ++E  Q++    + G  D ++A L   R ++     FL L
Sbjct: 213 IGLAVALGHIGPEAAFETAHIDETWQME----ICGEDDEELARLAARRAELLETARFLAL 268


>gi|403362409|gb|EJY80932.1| ATP12 chaperone protein [Oxytricha trifallax]
          Length = 530

 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 105/208 (50%), Gaps = 6/208 (2%)

Query: 111 WTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQ-QTDGIRPFMMPLMKLACTALERV 169
           W V LD +  KT  K  L +PT  LA A+  EW+ Q ++  ++   +          +  
Sbjct: 297 WAVTLDGKPTKTMFKDNLFIPTKALAIALAEEWEGQKESINLKSLHLNNFMAKTIRSQND 356

Query: 170 PLTRPKIIEHLMKKFNQDLVFCRAP---ADNDLTSGVHERQVQKIDPLLKWVESEFGFKP 226
           P+ +  + E L      D +  R     A+ND   G+ + Q +  D + + +E EFG K 
Sbjct: 357 PIIQDYMKEELTAILENDQICFRESEEDAENDYKRGLAKTQKEHTDRIFEILEREFGIKL 416

Query: 227 VVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIG-IFRGKLQIEE 285
            ++ S     Q D  ++ ++ +++  D Y L+++ +I+ ++ S  IA+  I R +L I++
Sbjct: 417 KIFHSIQIDAQ-DTSVQKLQPILQNCDPYVLSSLYSISQSSKSTAIALAFILRSELNIQD 475

Query: 286 AIELIRLEEDLQVDKWGLVEGGHDIDIA 313
           A+ + R++E+ Q   +G VEG HD D A
Sbjct: 476 AVSIARVDENYQSKHFGKVEGAHDFDEA 503


>gi|315500128|ref|YP_004088931.1| atp12 atpase [Asticcacaulis excentricus CB 48]
 gi|315418140|gb|ADU14780.1| ATP12 ATPase [Asticcacaulis excentricus CB 48]
          Length = 247

 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 7/209 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRF++ V  +   DG G+ V LD R +KTP    L LP   LA  +G EW+  + + +  
Sbjct: 20  KRFWKTVEIKA--DGPGYGVTLDGRAVKTPKGATLVLPNFALAALVGREWEAVE-ETVDF 76

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MPL +L   AL+ +       +    +    DLV C     +D    +  R+     P
Sbjct: 77  TAMPLTRLGFAALDHMDSGLEAALAEAARFAETDLV-CY---PSDYPQALIAREQAAWGP 132

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           ++ W+  E   + V  +S     Q    I+ V+ L+     Y  A + A      S+ +A
Sbjct: 133 VIDWLRRELSLEFVPQTSIMARGQPVATIEGVKTLLTTASVYVRAGLMAAIPLLGSVALA 192

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           + +++G+L  EEA    R+ E  Q + WG
Sbjct: 193 LALYKGRLSAEEAFAASRVGETFQKETWG 221


>gi|332375412|gb|AEE62847.1| unknown [Dendroctonus ponderosae]
          Length = 242

 Score = 78.6 bits (192), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 60/220 (27%), Positives = 106/220 (48%), Gaps = 16/220 (7%)

Query: 113 VMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRPFMMPLMKLACTALER-VPL 171
           + LD R LKTP   P  + T  LA A+  EW+ Q+   ++   M +  L  T L+    L
Sbjct: 18  ITLDQRKLKTPKGSPFLVDTEPLALAVATEWNSQKGKIVQS-KMHITTLCNTVLDNPNNL 76

Query: 172 TRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDPLLKWVESEFG--FKPVVY 229
           T+  I+ +++   + D V  +A  D DL     + Q+ + DP+++W    F    K  V 
Sbjct: 77  TKLDIVNYIVNCLDTDTVLYQANEDEDLL----KFQITEWDPVIEWFNKRFNVKLKKSVQ 132

Query: 230 SSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSL---VIAIGIFRGKLQIEEA 286
                  +ED   KT   L++    Y  A+++       +L   ++ +      L  E+A
Sbjct: 133 MDVSPVSEED---KTT--LIRHLMSYNFASVNGFLYGVDTLKSVILTLAATDRYLTPEKA 187

Query: 287 IELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFL 326
           + L RLEE+ Q  +WG VE  HD++  +L+ ++++  +F+
Sbjct: 188 VLLSRLEEEYQCGRWGRVEWAHDLNQQELQSRLAAVVLFV 227


>gi|50549087|ref|XP_502014.1| YALI0C19448p [Yarrowia lipolytica]
 gi|49647881|emb|CAG82334.1| YALI0C19448p [Yarrowia lipolytica CLIB122]
          Length = 289

 Score = 78.6 bits (192), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 60/239 (25%), Positives = 110/239 (46%), Gaps = 9/239 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLG--LAKAIGAEWDYQQTDGI 151
           KRF+E+++ ++ ++GN  TV L  ++L+T  +  L LP     LA  +  EW    +  +
Sbjct: 50  KRFWEELAVKDLENGNI-TVTLGGKSLRTMGQHDLILPATKKPLAHLLMHEWQVLPSLKL 108

Query: 152 RPFMMPLMKLACTALE--RVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQ 209
           +   +PL  L   A++  + P  R   I+ +M   + D +    P+D+     +   Q  
Sbjct: 109 KNHSVPLTSLVSRAIDISKSPAVRDAAIKDIMPYIDTDALLIFEPSDS-YQGRLRAAQEN 167

Query: 210 KIDPLLKWVESEFGFKPVVYSS---FFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAA 266
              P++   E  +G       S     G +Q     + V+        ++LAA++     
Sbjct: 168 DFRPVIADAEKFWGVTLKSMDSDKGLLGNRQTAEDKEAVKQWAYTLSPWQLAALERATLT 227

Query: 267 AHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVF 325
           + S +    +  GKL   +  EL+ LE   QV++WG VE  HD+D  D+R  ++S ++ 
Sbjct: 228 SKSFICGAFLISGKLTPTQVAELVGLETKFQVERWGEVEDTHDVDFCDIRRHLASCSLL 286


>gi|90424890|ref|YP_533260.1| ATP12 ATPase [Rhodopseudomonas palustris BisB18]
 gi|90106904|gb|ABD88941.1| ATP12 ATPase [Rhodopseudomonas palustris BisB18]
          Length = 261

 Score = 78.6 bits (192), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 102/215 (47%), Gaps = 14/215 (6%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+     EA+   G+ + LD + ++TPS+  L  P   LA+AI  EW  QQ   I P
Sbjct: 30  KRFYQNAGLVEAE--GGFAITLDDKAVRTPSRGHLIAPNRALAEAIVGEWQAQQ-QFIEP 86

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MPL +LA + ++ V      + + + K F  DL+  RA        G+  R+ +  DP
Sbjct: 87  TTMPLTRLANSVIDAVTTRVEAVTDDVAKYFETDLLCYRA----SFPEGLVARESEHWDP 142

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           +L W    +    ++       +Q D  +  V   + + D + +AA+  + +   S ++A
Sbjct: 143 VLFWAAETYSAHFILAEGIVPVRQPDAAVAAVRAALPQ-DPWAIAALHMVTSITGSALLA 201

Query: 274 IGI---FRGKLQIEEAIELIRLEEDLQVDKWGLVE 305
           + +   FR   Q+  A     ++ED  + +WG+ E
Sbjct: 202 LALHDRFRDADQVWAAAH---VDEDWNIAQWGIDE 233


>gi|126724898|ref|ZP_01740741.1| hypothetical protein RB2150_13721 [Rhodobacterales bacterium
           HTCC2150]
 gi|126706062|gb|EBA05152.1| hypothetical protein RB2150_13721 [Rhodobacteraceae bacterium
           HTCC2150]
          Length = 236

 Score = 78.6 bits (192), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 50/211 (23%), Positives = 99/211 (46%), Gaps = 7/211 (3%)

Query: 92  VGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGI 151
             KRF++ V   E D G G  + LD R++KTP K  L +P+  LA+ +  EW+  + + I
Sbjct: 5   AAKRFWKTVEISENDQGFG--ITLDGRSVKTPLKTALTVPSKSLAERVAREWEAVE-EKI 61

Query: 152 RPFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKI 211
            P  MP  +    AL++V     ++   +    + DL+  RA    D  + + +RQ    
Sbjct: 62  DPREMPFTRSVNAALDKVSTQHSEVANLIADYADSDLLCYRA----DTPAELVQRQDDAW 117

Query: 212 DPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLV 271
           +PLL W++S+ G +  V +      Q    +  + +     ++++L     + + + S +
Sbjct: 118 EPLLDWIKSKHGVEFTVNTGIMHRAQPAKTVAYLRDWTHSLNNFQLTGFHDLVSLSGSFI 177

Query: 272 IAIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           + +       +  +     R++E+ Q ++WG
Sbjct: 178 LGMSAAERAFEPAKIWAFSRVDENWQSEQWG 208


>gi|343428250|emb|CBQ71780.1| related to ATP12-F1F0-ATPase complex assembly protein [Sporisorium
           reilianum SRZ2]
          Length = 277

 Score = 78.6 bits (192), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 59/235 (25%), Positives = 106/235 (45%), Gaps = 10/235 (4%)

Query: 95  RFYEKVSTREADDG-NGWTVMLDYRTLKTPSKRPLKLPTLG--LAKAIGAEWDYQQTDGI 151
           RF++ V+ +    G +G+ ++LD R+++TP+ + + +P     LA  I  EW  +Q   +
Sbjct: 43  RFWKTVTLQPPTSGTDGFQILLDGRSIRTPNGQAIVIPRERELLATCIAQEWS-EQGKVL 101

Query: 152 RPFMMPLMKLACTALERVPLT--RPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQ 209
           +P  +PL  LA  ALE    T  R  I   L++    + +         L     + Q  
Sbjct: 102 KPHTLPLTSLAARALEGCTDTVERKGIEADLLRYLENETICFHESTPQSLV----DLQTT 157

Query: 210 KIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHS 269
              PLL  + + +  +   + S        G + T    +      +LAA +       S
Sbjct: 158 HWTPLLAHINTTYATRITPFPSLLNNTHPPGTLATFATHLSTLHAVDLAAFERAVMLTKS 217

Query: 270 LVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATV 324
            +I++ +  G L +E A +   +E   Q+++WG VE  HD+D A++R  + S  V
Sbjct: 218 FLISLALVSGHLDVEAAAKAAEVEVQSQINRWGAVEDSHDVDQAEMRRSLGSVAV 272


>gi|260831593|ref|XP_002610743.1| hypothetical protein BRAFLDRAFT_126077 [Branchiostoma floridae]
 gi|229296111|gb|EEN66753.1| hypothetical protein BRAFLDRAFT_126077 [Branchiostoma floridae]
          Length = 257

 Score = 78.2 bits (191), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 53/222 (23%), Positives = 97/222 (43%), Gaps = 28/222 (12%)

Query: 94  KRFYEKVSTREADDGNG-WTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIR 152
           KRFY+ VS  ++   NG + + LD R LKTP  R   +P   +A A+  EW+ Q  +   
Sbjct: 33  KRFYKNVSISQS---NGMYEINLDRRKLKTPMSRLFSVPNEPIAIAVATEWEAQHKEIKM 89

Query: 153 PFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKID 212
             M  L  + C     +       +E                        + E + ++ +
Sbjct: 90  SQMHMLPFMVCCFFPTISYREESPVE------------------------LAELEEREWE 125

Query: 213 PLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVI 272
           PLL WV  ++  +    +S  G         T++  +   + + L  + ++     S+V+
Sbjct: 126 PLLDWVRQKYDIQLQSSTSIHGPTIPKATKSTLKKHLLHYNHWSLVGVTSLVETLKSVVL 185

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIAD 314
           ++ +    L +E+A+ L RLE + Q+ +WG VE  HD+++ D
Sbjct: 186 SLALMDKHLTVEKAVALARLETEFQIMRWGNVEWAHDMELTD 227


>gi|402075209|gb|EJT70680.1| ATP12 chaperone [Gaeumannomyces graminis var. tritici R3-111a-1]
          Length = 441

 Score = 78.2 bits (191), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 75/291 (25%), Positives = 122/291 (41%), Gaps = 62/291 (21%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPS-KRPLKLPTLG--LAKAIGAEWDYQQTDG 150
           KRF+ +V  RE D    W V LD R ++ P+ K+ L++P     LA A+  EWD  Q + 
Sbjct: 147 KRFWREVHVREVD--GAWEVHLDSRKVRHPTTKQILRVPATKPQLAYALANEWD--QMES 202

Query: 151 IRP----FMMPLMKLACTALE---------------RVPLTRPKIIEHLMKKFNQDLVFC 191
           +R      M+PL  L C AL+                +  TR   +   M+  + D + C
Sbjct: 203 VRQTTQQHMVPLTGLVCRALDIRDDDAAHRAAAGKDGMAPTRASAVATAMRYLDTDNLLC 262

Query: 192 RAPADND-LTSG---VHERQVQKIDPLLKWVESEF------GFKPVVYSSFFGG-----K 236
            AP D + L +G   + E Q +   P++  +ES        G    +  +  GG      
Sbjct: 263 WAPPDAEALAAGETILRELQERAARPIMAHLESRVWTTGGGGGSVRLRPALDGGGMLPTP 322

Query: 237 QEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIF------------------- 277
           Q+  +   V   + + D ++LA ++  A A  S+++A  +                    
Sbjct: 323 QDPAVHDAVRAWLSELDAFDLAGVERAALAGKSVLVAARLVARWSENGLEAKVADEEQKQ 382

Query: 278 --RGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFL 326
               +  +EEA E   +E   Q  +WG VE  HD++  DLR Q  S  + +
Sbjct: 383 DGEAEFGVEEATEAASVEVRWQTGRWGEVEDTHDVEKEDLRRQFGSVVLLV 433


>gi|209542672|ref|YP_002274901.1| ATP12 ATPase [Gluconacetobacter diazotrophicus PAl 5]
 gi|209530349|gb|ACI50286.1| ATP12 ATPase [Gluconacetobacter diazotrophicus PAl 5]
          Length = 246

 Score = 78.2 bits (191), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 107/244 (43%), Gaps = 22/244 (9%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIR- 152
           KRF+++ +     DG  + V+LD RT++ P    L + +  LA A+ AEW  Q   G + 
Sbjct: 12  KRFWDQATVETLPDG--FAVLLDGRTVRLPGGTALCVRSAALATALAAEW--QAAGGSKG 67

Query: 153 ----PFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQV 208
               P  +PL ++A T LER+   R   +  L      DL+  R      L     ERQ 
Sbjct: 68  GVFTPADLPLTRIAGTMLERIAPDRSATVAVLAGYAGGDLLCYRVRTPALLV----ERQR 123

Query: 209 QKIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAH 268
           Q+ DP L W+   +G    V        Q +  +  V  ++    D  LAA+     A  
Sbjct: 124 QEWDPWLDWLRVRYGISLTVTEGVMPIAQSEEALGAVRAVLDALSDGALAALGVAVPALG 183

Query: 269 SLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIAD----LRVQISSATV 324
           SLV+ + +  G+L  E+A     L+E  Q++ W     GHD   A+    L   +  A  
Sbjct: 184 SLVLGLALAEGRLTAEQATACATLDERTQMELW-----GHDAQQAERLSRLEWDVRDAET 238

Query: 325 FLGL 328
           FL L
Sbjct: 239 FLHL 242


>gi|164428513|ref|XP_965816.2| hypothetical protein NCU00676 [Neurospora crassa OR74A]
 gi|157072176|gb|EAA36580.2| conserved hypothetical protein [Neurospora crassa OR74A]
          Length = 431

 Score = 78.2 bits (191), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 76/282 (26%), Positives = 119/282 (42%), Gaps = 49/282 (17%)

Query: 91  IVGKRFYEKVSTREADDGNGWTVMLDYRTLKTP-SKRPLKLPTL--GLAKAIGAEWD--Y 145
           ++ +RF++ V     +D N   + LD R L+ P +K  ++LP     LA A+  EWD   
Sbjct: 135 LLKRRFWKSVHVATKNDMN--EIHLDSRPLRRPDTKSIIRLPLTKPSLASALAIEWDQLV 192

Query: 146 QQTDGIRPFMMPLMKLACTALERVPL-------TRPKIIEHLMKKFNQDLVFCRAPADND 198
                 +  ++PL  L C AL+            R  I   L++  + D + C APA   
Sbjct: 193 SAQQATKQHLIPLTSLVCRALDIADQDSLGKTDIRNAIATVLLRYLDTDSLLCWAPAPEH 252

Query: 199 LTSGVHE-----RQVQK------IDPLLKWVESEFGFKPVV-YSSFFGGKQEDGLIKTVE 246
              G +E     R+VQ+      +  L   V       PV+  +S    +QE G  + V+
Sbjct: 253 PEDGRNEAGYTLREVQEEAYSSVVSFLTTRVWPGVTIVPVLDETSIMPRQQEPGTREVVQ 312

Query: 247 NLMKKTDDYELAAIDAIAAAAHSLVIAI-----------------------GIFRGKLQI 283
             M     +ELAA++    A  SL++A                         I   +  +
Sbjct: 313 GWMLGLSAWELAALERATLAGKSLLVAARLVVEWSGDGGNAVVPTPAEEEEEINTKRWGV 372

Query: 284 EEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVF 325
           EEA + + LE D Q  +WG VE  HD++  DLR Q+ SA + 
Sbjct: 373 EEAAKAVSLEVDWQTTQWGEVEDTHDVEKVDLRRQLGSAVLL 414


>gi|261213990|ref|ZP_05928271.1| ATP12 ATPase [Brucella abortus bv. 3 str. Tulya]
 gi|260915597|gb|EEX82458.1| ATP12 ATPase [Brucella abortus bv. 3 str. Tulya]
          Length = 260

 Score = 78.2 bits (191), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 9/210 (4%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFYEK    E++   G+ V LD R +KTP++  L LPT   A+ +  E+  Q+   I P
Sbjct: 33  KRFYEKAEVAESE--GGFAVHLDGRPVKTPARNLLLLPTRAAAQIVADEFAAQEK-LIDP 89

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP  +L  TA++ +      + E +++    D++  RA +  +L S    RQ +  DP
Sbjct: 90  GKMPATRLVNTAIDGIAQDPQAVFEDILRFAGTDMLCYRADSPQELVS----RQTENWDP 145

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKK-TDDYELAAIDAIAAAAHSLVI 272
           L+  +ES  G +  +       +Q    I      M    D   LAA+  +     S +I
Sbjct: 146 LIDRMES-LGARFALAEGVMHVEQPREAIAAFSVHMAGFKDPLALAALHTMTTLMGSAII 204

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           A+ + +G++  E+   +  ++ED  ++ WG
Sbjct: 205 ALAVAKGEISAEKGWAIAHIDEDWTIEHWG 234


>gi|336463652|gb|EGO51892.1| hypothetical protein NEUTE1DRAFT_89676 [Neurospora tetrasperma FGSC
           2508]
          Length = 401

 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 76/281 (27%), Positives = 121/281 (43%), Gaps = 48/281 (17%)

Query: 91  IVGKRFYEKVSTREADDGNGWTVMLDYRTLKTP-SKRPLKLPTL--GLAKAIGAEWD--Y 145
           ++ +RF++ V     +D N   + LD R L+ P +K  ++LP     LA A+  EWD   
Sbjct: 107 LLKRRFWKSVHVATKNDMN--EIHLDSRPLRRPDTKSIIRLPLTKPSLASALAIEWDQLV 164

Query: 146 QQTDGIRPFMMPLMKLACTALERVPL-------TRPKIIEHLMKKFNQDLVFCRAPADND 198
                 +  ++PL  L C AL+            R  I   L++  + D + C APA   
Sbjct: 165 SAQQATKQHLIPLTSLVCRALDIADEDSLGKTDIRNAIATVLLRYLDTDSLLCWAPAPEH 224

Query: 199 LTSGVHE-----RQVQK------IDPLLKWVESEFGFKPVV-YSSFFGGKQEDGLIKTVE 246
              G +E     R+VQ+      +  L   V       PV+  +S    +QE G  + V+
Sbjct: 225 PEDGRNEAGYTLREVQEEAYSSVVSFLTTRVWPGVTIVPVLDETSIMPRQQEPGTREVVQ 284

Query: 247 NLMKKTDDYELAAIDAIAAAAHSLVIAIGI---FRG-------------------KLQIE 284
             M     +ELAA++    A  SL++A  +   + G                   +  +E
Sbjct: 285 GWMLGLSAWELAALERATLAGKSLLVAARLVVEWSGDGGNAVVQTPAEEEEMNTKRWGVE 344

Query: 285 EAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVF 325
           EA + + LE D Q  +WG VE  HD++  DLR Q+ SA + 
Sbjct: 345 EAAKAVSLEVDWQTTQWGEVEDTHDVEKVDLRRQLGSAVLL 385


>gi|374332187|ref|YP_005082371.1| ATPase [Pseudovibrio sp. FO-BEG1]
 gi|359344975|gb|AEV38349.1| ATPase [Pseudovibrio sp. FO-BEG1]
          Length = 264

 Score = 77.8 bits (190), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 99/209 (47%), Gaps = 7/209 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFYE+VS    DD   + V+LD R++KTP +  L      +A+ + AEW+ Q+ + I P
Sbjct: 33  KRFYERVSVELKDDV--YAVLLDGRSIKTPGRNALVFKDEVIAEGVAAEWELQEEE-IDP 89

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MPL ++A +A++ V      + + + +    D +  RA +  +L      RQ  + DP
Sbjct: 90  GTMPLTRIAHSAIDAVEEKFADVADEITRYAGNDHLCYRADSPAELVG----RQTAQWDP 145

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           +L W E     +  +        Q++ +       + K D  +LAAI  + +   S ++A
Sbjct: 146 VLGWAEKLLDGRFKLVEGIMHVAQDEAVTAAYRAELDKYDALQLAAIHTVTSICGSALLA 205

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           + +       +       ++ED  +++WG
Sbjct: 206 LALAEKAFDADAVWSAAHVDEDWNIEQWG 234


>gi|402826620|ref|ZP_10875797.1| ATP12 ATPase [Sphingomonas sp. LH128]
 gi|402259854|gb|EJU10040.1| ATP12 ATPase [Sphingomonas sp. LH128]
          Length = 235

 Score = 77.8 bits (190), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 102/212 (48%), Gaps = 8/212 (3%)

Query: 94  KRFYEKVSTREADDG---NGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDG 150
           KRFY++ +  + ++G   +GW  +LD R ++T   RP  +PT  LA+A+ AEW  +Q + 
Sbjct: 2   KRFYKEATAEQTENGPEDSGWRAVLDGRPIRTAGGRPQVVPTQALAQALAAEW-ARQGEE 60

Query: 151 IRPFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQK 210
           I         LA  A++ V   R  +I  L+     D +  RA  D  L    ++RQ++ 
Sbjct: 61  IDTATFHYRDLADFAIDAVAPARGTVIAELLPYAETDTLCYRADPDEAL----YKRQMEM 116

Query: 211 IDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSL 270
            +P+L   E+  G      S      Q    +  + + +    D+ELAA+  +++ + SL
Sbjct: 117 WEPVLSSAEARLGVTFTRISGIIHKPQPGPTLACLRSELDACSDFELAALKMLSSLSASL 176

Query: 271 VIAIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           VIA+   R     E   +   LE D QV+ WG
Sbjct: 177 VIALEAIRPGADAEALWKAAELEADWQVELWG 208


>gi|37782440|gb|AAP34466.1| LP3663 [Homo sapiens]
          Length = 184

 Score = 77.8 bits (190), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 89/175 (50%), Gaps = 7/175 (4%)

Query: 156 MPLMKLACTALERVPLTRPK--IIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
           M L  L  T+L+  P  R K  +I   +K  + D +  R      L     E Q  + DP
Sbjct: 1   MHLTTLCNTSLDN-PTQRNKDQLIRAAVKFLDTDTICYRVEEPETLV----ELQRNEWDP 55

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           +++W E  +G +    +S  G        + + + +   + + L  I+ +AA   S+V+ 
Sbjct: 56  IIEWAEKRYGVEISSSTSIMGPSIPAKTREVLVSHLASYNTWALQGIEFVAAQLKSMVLT 115

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGL 328
           +G+   +L +E+A+ L RLEE+ Q+ KWG +E  HD ++ +LR + ++ T+F+ L
Sbjct: 116 LGLIDLRLTVEQAVLLSRLEEEYQIQKWGNIEWAHDYELQELRARTAAGTLFIHL 170


>gi|162148056|ref|YP_001602517.1| ATP12 chaperone protein [Gluconacetobacter diazotrophicus PAl 5]
 gi|161786633|emb|CAP56215.1| putative ATP12 chaperone protein [Gluconacetobacter diazotrophicus
           PAl 5]
          Length = 246

 Score = 77.8 bits (190), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 107/244 (43%), Gaps = 22/244 (9%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIR- 152
           KRF+++ +     DG  + V+LD RT++ P    L + +  LA A+ AEW  Q   G + 
Sbjct: 12  KRFWDQATVETLPDG--FAVLLDGRTVRLPGGTALCVRSAALATALAAEW--QAAGGSKG 67

Query: 153 ----PFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQV 208
               P  +PL ++A T LER+   R   +  L      DL+  R      L     ERQ 
Sbjct: 68  GVFTPADLPLTRIAGTMLERIAPDRSATVAVLAGYAGGDLLCYRVRTPALLV----ERQR 123

Query: 209 QKIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAH 268
           Q+ DP L W+   +G    V        Q +  +  V  ++    D  LAA+     A  
Sbjct: 124 QEWDPWLDWLRVRYGISLTVTEGVMPIAQSEEALGAVRAVLDALSDGALAALGVAVPALG 183

Query: 269 SLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIAD----LRVQISSATV 324
           SLV+ + +  G+L  E+A     L+E  Q++ W     GHD   A+    L   +  A  
Sbjct: 184 SLVLGLALAEGRLTAEQATACATLDERTQMELW-----GHDAQQAERLSRLERDVRDAET 238

Query: 325 FLGL 328
           FL L
Sbjct: 239 FLRL 242


>gi|308482746|ref|XP_003103576.1| hypothetical protein CRE_28743 [Caenorhabditis remanei]
 gi|308259997|gb|EFP03950.1| hypothetical protein CRE_28743 [Caenorhabditis remanei]
          Length = 269

 Score = 77.8 bits (190), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 70/248 (28%), Positives = 117/248 (47%), Gaps = 17/248 (6%)

Query: 94  KRFYEKVST-READDGNGWT---VMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTD 149
           K+FY++VS   E D+  G +   V+LD+R LKT   + LKL +  LA AI  EW   Q +
Sbjct: 24  KKFYKEVSVANEIDEKTGNSIHKVLLDHRVLKTQGGQVLKLNSYPLALAIAEEWS-SQAE 82

Query: 150 GIRPFMMPLMKLACTALERVPL--TRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQ 207
            ++   M L  LA TA +  PL  T   I + ++   + D V       N  +S +H  Q
Sbjct: 83  FLQLGQMRLTGLAFTAQDN-PLEQTADTISQKILDYVDGDTVLFF----NTESSKLHRYQ 137

Query: 208 VQKIDPLLKWVESEFGFKPVVYSSFFG---GKQEDGLIKTVENLMKKTDDYELAAIDAIA 264
            +K  PL+K + S+ G +     S        Q D     ++  +++ +   L  +    
Sbjct: 138 EEKWAPLIKNLNSDLGTQVRCSESILDCDVASQTDK--DKIDRWIRQHNFPALVGLQYAT 195

Query: 265 AAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATV 324
            +  S +IA    R  +  E A++   LE+  Q + WG VE  H ++  +L  ++S+A +
Sbjct: 196 ESVKSFIIAYNAIRHHIDAETAVDAATLEQRTQAETWGNVEWAHGLEREELMTRLSAACL 255

Query: 325 FLGLSRRN 332
           F+  +  N
Sbjct: 256 FVYFNSNN 263


>gi|341886035|gb|EGT41970.1| hypothetical protein CAEBREN_29877 [Caenorhabditis brenneri]
          Length = 272

 Score = 77.4 bits (189), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 72/266 (27%), Positives = 124/266 (46%), Gaps = 23/266 (8%)

Query: 74  SSSSSSVTMPMSFMTGSIVGKRFYEKVST-READDGNG---WTVMLDYRTLKTPSKRPLK 129
           ++S+S++T P          K+FY++VS   E D+  G     V+LD+R LKT   + LK
Sbjct: 17  AASASALTKP----------KKFYKEVSVINETDEKTGNQIHKVLLDHRVLKTQGGQVLK 66

Query: 130 LPTLGLAKAIGAEWDYQQTDGIRPFMMPLMKLACTALERVPL--TRPKIIEHLMKKFNQD 187
           L +  LA AI  EW   Q + ++   M L  LA TA +  PL  T   I + ++   + D
Sbjct: 67  LDSYPLALAIAEEWS-SQDEFLQLGQMRLTGLAFTAQDN-PLEQTADTISQKILDYVDGD 124

Query: 188 LVFCRAPADNDLTSGVHERQVQKIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIK-TVE 246
            V    P     +S +H  Q +K  PL++ + S+ G +     +           K  ++
Sbjct: 125 TVLFFNPE----SSKLHRYQSEKWAPLIQNLNSDIGTQIRYSENILDCDVASNNDKDKID 180

Query: 247 NLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEG 306
             +++ +   L  +     +  S +IA    R  +  E AI+   LE+  Q + WG VE 
Sbjct: 181 RWIRQHNFPALVGLQYATESVKSFIIAYNALRHHIDPETAIDAATLEQRTQAETWGNVEW 240

Query: 307 GHDIDIADLRVQISSATVFLGLSRRN 332
            H ++  +L  ++S+A +F+  +  N
Sbjct: 241 AHGLEREELMTRLSAACLFVYFNSNN 266


>gi|328770747|gb|EGF80788.1| hypothetical protein BATDEDRAFT_11145 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 225

 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 101/219 (46%), Gaps = 9/219 (4%)

Query: 109 NGWTVMLDYRTLKTPSKRPLKLPTL--GLAKAIGAEWDYQQTDGIRPFMMPLMKLACTAL 166
           +G+ ++LD R LKTP    + +P      A    AEW+ Q    ++   +PL  +   A+
Sbjct: 7   DGFVLLLDGRILKTPDGNQVVIPLSRPAFAALTAAEWEGQDK-VLKSHSLPLTSIIVRAV 65

Query: 167 E--RVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDPLLKWVESEFGF 224
           +  +    R  +I+ ++K  + D +  +    + L     E Q    +PL+ W++     
Sbjct: 66  DTFKDDSIRQGVIDTMLKYVHTDSICYQQSYPSSLV----ELQKCYWNPLVDWLKEAHNI 121

Query: 225 KPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGKLQIE 284
             V         Q D ++  +  +++  D+ +LAA +     + S +I + +  G++ +E
Sbjct: 122 DIVTTEGIISVTQSDAVMDKLREIIQGYDNIKLAAFEKAVMRSKSFIIGLALMEGEISVE 181

Query: 285 EAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSAT 323
            A    RLE   Q++KWG VE  HD D  DL  Q+ + T
Sbjct: 182 FATTAGRLEVIHQIEKWGEVEDSHDTDREDLARQLGACT 220


>gi|401885779|gb|EJT49867.1| hypothetical protein A1Q1_01019 [Trichosporon asahii var. asahii
           CBS 2479]
          Length = 232

 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/220 (28%), Positives = 98/220 (44%), Gaps = 44/220 (20%)

Query: 109 NGWTVMLDYRTLKTPSKRPLKLPTLG--LAKAIGAEWDYQQTDGIRPFMMPLMKLACTAL 166
           N  TV LD+R LKTP    + +P     LA  I AEW+  Q   ++ + +PL  LA  AL
Sbjct: 51  NRITVTLDHRNLKTPEGAKMVIPKERQLLAMMIAAEWE-NQDQVLKQYALPLTSLASRAL 109

Query: 167 ERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDPLLKWVESEFGFKP 226
           +   +  PKI E                       GV       ID LL +++++     
Sbjct: 110 D--GMKDPKIKE-----------------------GV-------IDALLAYLDTD----- 132

Query: 227 VVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGKLQIEEA 286
               +    +Q    I    N+++  D ++LAA++    A  S VI + +  G++   EA
Sbjct: 133 ----TICVAEQTPETIAKFRNILEDMDPFQLAAMERAVYATKSFVIGLALVEGRITAHEA 188

Query: 287 IELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFL 326
                +E   Q+++WG VE  HD+D  D+R  + SA V L
Sbjct: 189 ALASHVEVASQIERWGEVEDSHDVDYQDIRRALGSAAVAL 228


>gi|392902196|ref|NP_001255920.1| Protein Y116A8C.27, isoform a [Caenorhabditis elegans]
 gi|54110585|emb|CAB55134.2| Protein Y116A8C.27, isoform a [Caenorhabditis elegans]
          Length = 269

 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 74/269 (27%), Positives = 125/269 (46%), Gaps = 27/269 (10%)

Query: 73  ASSSSSSVTMPMSFMTGSIVGKRFYEKVST-READDGNG---WTVMLDYRTLKTPSKRPL 128
           A++ +S++T P          K+FY++VS   E D+  G     V+LD+R LKT   + L
Sbjct: 13  AAAQASALTKP----------KKFYKEVSVINETDESTGNQIHKVLLDHRVLKTQGGQVL 62

Query: 129 KLPTLGLAKAIGAEWDYQQTDGIRPFMMPLMKLACTALERVPL--TRPKIIEHLMKKFNQ 186
           KL +  LA AI  EW   Q + ++   M L  LA TA +  PL  T   I + ++     
Sbjct: 63  KLDSYPLALAIAEEWS-SQDEFLQLGQMRLTGLAFTAQDN-PLEQTADTISQKILDYVEG 120

Query: 187 DLVFCRAPADNDLTSGVHERQVQKIDPLLKWVESEFGFKPVVYSSFFG---GKQEDGLIK 243
           D V       N  +S +H  Q +K  PL+K + ++ G K     +        + D   +
Sbjct: 121 DTVLFF----NTESSKLHRYQEEKWAPLIKNLNNDLGIKVRPSENILDCDVASENDK--E 174

Query: 244 TVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGL 303
            ++  +++ +   L  +     +  S VIA    R  +  + AI+   LE+  Q + WG 
Sbjct: 175 KIDRWIRQHNFPALVGLQYATESVKSFVIAYNAIRHHIDPDTAIDAATLEQRTQAETWGN 234

Query: 304 VEGGHDIDIADLRVQISSATVFLGLSRRN 332
           VE  H I+  +L  ++S+A +F+  +  N
Sbjct: 235 VEWAHGIEREELMTRLSAACLFVYFNSNN 263


>gi|408388176|gb|EKJ67866.1| hypothetical protein FPSE_12014 [Fusarium pseudograminearum CS3096]
          Length = 365

 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 74/279 (26%), Positives = 121/279 (43%), Gaps = 43/279 (15%)

Query: 89  GSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPL-KLPTL--GLAKAIGAEWDY 145
           G  + KRF++ V+ +E D      V LD R L+ PS + + ++P     LA A+  EWD 
Sbjct: 83  GGALKKRFWKDVTVQEVD--GALQVFLDTRPLRHPSTKAIVRIPITKPDLASALALEWDL 140

Query: 146 QQT--DGIRPFMMPLMKLACTALE----------RVPLTRPKIIEHLMKKFNQDLVFCRA 193
             +  D  R  ++PL  L C A++           +   R  I   L++  + D + C  
Sbjct: 141 LTSAQDATRHHLIPLTSLTCRAIDIAEADNAPGSDISEIRSSIATVLLRYLDTDSILCWN 200

Query: 194 P--ADNDLTSGVHE--RQVQK------IDPLLKWVESEFGFKPVVYS-SFFGGKQEDGLI 242
           P   + DL +   E  R+VQK      +  L   V      +PV+   S     Q  G+ 
Sbjct: 201 PPAGEYDLKNEAGESLREVQKRTADDIVSFLTTHVWPGITIQPVLDGHSLLPRSQAPGVR 260

Query: 243 KTVENLMKKTDDYELAAIDAIAAAAHSLVIAI---------GIFRGKLQ------IEEAI 287
           + ++  +   D +E+A ++  A A  SL+ A           + +G L       +EEA 
Sbjct: 261 EIIQGWIVGLDAFEIAGLERAALAGKSLIAAARFVAEWSEGSVGKGNLNTGKKFGVEEAA 320

Query: 288 ELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFL 326
               LE + Q  +WG VE  HD+   D+R Q+ S  + +
Sbjct: 321 VATSLEVNWQTMQWGEVEDTHDVGKEDVRRQLGSVVLLV 359


>gi|402593712|gb|EJW87639.1| hypothetical protein WUBG_01449 [Wuchereria bancrofti]
          Length = 266

 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/239 (24%), Positives = 115/239 (48%), Gaps = 23/239 (9%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
            RFYE+           + + LD   L TP + P+++ +  LA A+  EW+  QT+ +R 
Sbjct: 23  NRFYEEARVVFKPVEEVYNIYLDKHCLVTPKRNPVEIYSEALALAVAQEWN-MQTNELRV 81

Query: 154 FMMPLMKLACTALER-VPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKID 212
            +M L  L  TA +  + L +  ++  +++  ++D +  R   +++L   +H  +    +
Sbjct: 82  NLMRLTGLIFTATDNPMSLQKSDLLSQVLQFLDKDTILYRLEENSNL---LHLEET-NWN 137

Query: 213 PLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDY---ELAAIDAIAAAAHS 269
           P+++WV  E+  + V+          +  ++    L  +  DY   +L  +     A  S
Sbjct: 138 PVVEWVNWEY--EAVI--------DNNSRVR----LTNQLSDYTFLQLVGLQYATEALKS 183

Query: 270 LVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGL 328
           + + +     +L ++EA+EL  LE+  Q D WG VE  HDI+  +L  ++S+  + + L
Sbjct: 184 VFLTLATVSSRLDVDEAVELALLEQKYQSDVWGKVEWAHDIEREELISRLSAGVLLVHL 242


>gi|451845335|gb|EMD58648.1| hypothetical protein COCSADRAFT_41759 [Cochliobolus sativus ND90Pr]
          Length = 367

 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 74/274 (27%), Positives = 117/274 (42%), Gaps = 38/274 (13%)

Query: 90  SIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLG--LAKAIGAEWDYQQ 147
           S++ KRF++ VS +E D   G  V LD+R ++ P+K+ L +P     LA AI  EWD   
Sbjct: 92  SMLAKRFWKDVSVKETD--GGLQVFLDHRPVRMPNKQILTVPASKPQLAAAIALEWDLLM 149

Query: 148 T--DGIRPFMMPLMKLACTALERVPL-------TRPKIIEHLMKKFNQDLVFCRAPA--- 195
           +    ++   +P+  LA  A++            R  I+ + M+    D + C AP    
Sbjct: 150 SAQQALKNDYIPMTSLAARAIDIEAADKAGQSNIRNDILAYFMRVLATDTLLCWAPEKVI 209

Query: 196 DNDLTSGVHERQVQK------IDPLLKWVESEFGFKPVV-YSSFFGGKQEDGLIKTVENL 248
           ++ L  G   RQ+Q+      I  L   V      KP +  +S    +Q     + +   
Sbjct: 210 NDTLQDGKTLRQIQEEVATDIIAYLQTHVFPGIEIKPTLDPNSIIPVEQPKMTQEVIRGW 269

Query: 249 MKKTDDYELAAIDAIAAAAHSLVIAIGIFR---------------GKLQIEEAIELIRLE 293
                 YELA ++    A+ SL+++  +                  +  I EA E   LE
Sbjct: 270 CAGLPAYELAGLERAVLASKSLLVSARLVHEWSEVFAQSRSAAEGSRFGINEAAEASSLE 329

Query: 294 EDLQVDKWGLVEGGHDIDIADLRVQISSATVFLG 327
              Q  +WG VE  HD+   DLR Q+ SA V + 
Sbjct: 330 VKWQTVQWGEVEDTHDVQREDLRRQLGSAIVLVS 363


>gi|220926862|ref|YP_002502164.1| ATP12 ATPase [Methylobacterium nodulans ORS 2060]
 gi|219951469|gb|ACL61861.1| ATP12 ATPase [Methylobacterium nodulans ORS 2060]
          Length = 262

 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 8/210 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY +     A+DG+   ++LD R  +TP +R L +P   +A+A+  EW  Q  + I P
Sbjct: 33  KRFYAEAGVAAAEDGH--RLVLDGRPARTPGRRMLAVPQAAVAQALAEEWGAQGEE-IDP 89

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MPL +L  TAL+ V   R  + E +      DL+  RA     L +     Q    DP
Sbjct: 90  ARMPLTRLVNTALDGVADRRAAVAEDIAAYAGSDLLAYRAGDPARLVAS----QSAAWDP 145

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDD-YELAAIDAIAAAAHSLVI 272
           +L W  SE G + ++        Q +  ++ V   ++  +    L  +  +     S+++
Sbjct: 146 VLDWARSELGARFMLAEGVMHVPQPEESLQAVRRAVEAVESPLALTGLHVMTTLTGSVLL 205

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           A+ +  G+L  EEA     ++E  Q   WG
Sbjct: 206 ALAVLHGRLTAEEAWAAAHVDEIFQASVWG 235


>gi|452845433|gb|EME47366.1| hypothetical protein DOTSEDRAFT_50781 [Dothistroma septosporum
           NZE10]
          Length = 697

 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 79/312 (25%), Positives = 138/312 (44%), Gaps = 51/312 (16%)

Query: 67  GRKQETASSSSSSVTM-PMSFMTGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSK 125
            RKQ+ A +      + P      S + KRF++ VS +E D+G    V+LD R ++T S+
Sbjct: 74  ARKQQQAEALRQGQNVKPDPAKPTSALQKRFWKNVSVKETDEG--LQVLLDSRPVRTASR 131

Query: 126 RPLKLPT--LGLAKAIGAEWDY--QQTDGIRPFMMPLMKLACTALE--------RVPLTR 173
           + L LP     LA AI  EWD+       ++   +P+  +   A++         V + R
Sbjct: 132 QVLTLPKNKRALATAIALEWDHLVSAQQALKQHYIPMTSITSRAMDIEAADQQGNVAI-R 190

Query: 174 PKIIEHLMKKFNQDLVFCRAPADN------DLTS-------GVHERQVQKIDPLLKWVES 220
             +++ +M+    D + C AP  +      ++++        + +RQ    +P+L ++ +
Sbjct: 191 ENLVKMVMRYLATDTLLCWAPEKSRHDPMENMSTRQDAPERNLRQRQKDVAEPILAFLTT 250

Query: 221 EF--GFKPV-VYS--SFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIG 275
               G + V V S  S     Q +   + V   +     Y+LAA++    A  SL+IA+ 
Sbjct: 251 HIFPGVEIVEVLSEDSIIPKSQPEMTTEVVRGWVSDLAPYDLAALERGVLATKSLLIAVR 310

Query: 276 IF-----------------RGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQ 318
           +                    +  IE+A E   LE   Q ++WG VE  HD++  DLR Q
Sbjct: 311 LLVEWSQEWKRLQKEPEMKTTRFGIEQAEEAATLETVHQTEQWGEVEDTHDVNKEDLRRQ 370

Query: 319 ISSATVFLGLSR 330
           + SA +    +R
Sbjct: 371 LGSAILLTSTTR 382


>gi|294011529|ref|YP_003544989.1| ATP synthase mitochondrial F1 complex assembly factor 2
           [Sphingobium japonicum UT26S]
 gi|292674859|dbj|BAI96377.1| ATP synthase mitochondrial F1 complex assembly factor 2
           [Sphingobium japonicum UT26S]
          Length = 231

 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 93/209 (44%), Gaps = 7/209 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFYE  +    +  +G+ + LD R ++TP++  L LPT GLA+AI  EW   Q + + P
Sbjct: 2   KRFYEDAAVVAGE--SGFEIRLDGRPVRTPARAALALPTQGLAEAIAEEW-RAQGETVDP 58

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP   LA  A++++          + +    DL+  RA    +L +    R+    DP
Sbjct: 59  RSMPFTGLANGAIDQIAPHSGSFAAGISRYAESDLLCYRAEGPAELVA----REAASWDP 114

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           LL W  + +     V        Q    ++ +   +   D + LA +  +   + SLV  
Sbjct: 115 LLDWAMARYDVAFRVTQGVVPVAQPARTLERLAAAVAAFDPFTLAGLSTLVTLSGSLVCG 174

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           + +  G    +       ++E  +V++WG
Sbjct: 175 LAVVEGGHDADLIWTAAEIDEAWEVEQWG 203


>gi|304391489|ref|ZP_07373431.1| hypothetical protein R2A130_0145 [Ahrensia sp. R2A130]
 gi|303295718|gb|EFL90076.1| hypothetical protein R2A130_0145 [Ahrensia sp. R2A130]
          Length = 265

 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/224 (28%), Positives = 99/224 (44%), Gaps = 13/224 (5%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+ V   + D    W V+LD R +KTP K  L +    + + + AEW+  Q + I P
Sbjct: 33  KRFYKAVELGDVD--GEWRVLLDGRPVKTPGKNFLAVDNKPIMERLAAEWN-AQGERIDP 89

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP+ +L  TAL+ V      + E +++    D++  RA   +DL     E Q    DP
Sbjct: 90  LTMPMTRLVNTALDGVATEMQAVREDIIRFAGTDMLCYRAGQPDDLI----EIQRATWDP 145

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDD-YELAAIDAIAAAAHSLVI 272
           LL W E+    +  +        Q    I    + +K  +    LA+   +     S +I
Sbjct: 146 LLDWAETALDTRLTLAEGIMHVAQPRESIAAFGHHVKAIEHPLTLASAHVVTTLTGSAII 205

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLR 316
           AI +  G+   E A     ++ED     W + + G D + AD R
Sbjct: 206 AISVCHGQRDAEAAWAAAHVDED-----WNIAQWGQDYEAADRR 244


>gi|71749058|ref|XP_827868.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
           GUTat10.1]
 gi|70833252|gb|EAN78756.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
          Length = 380

 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 71/274 (25%), Positives = 125/274 (45%), Gaps = 18/274 (6%)

Query: 61  ESIYIKGRKQETASS----SSSSVTMPMSFMTGSIVGKR-FYEKVSTREADDGN-GW-TV 113
           E ++ +  KQE   S      S   M +S    S    R F++ V  R+ D+ + GW TV
Sbjct: 89  EKLFQQLDKQEKEESRVLEEDSLYQMDISLRESSRAAVRVFWKDVDVRKLDEEHEGWYTV 148

Query: 114 MLDYRTLKT-PSKRPLKLPTLGLAKAIGAEWDYQQTDGIRPFMMPLMKLACTALERVPLT 172
           ++D R +K   S+  L +P+  +A A   E+  +Q D +   +MPL  +   AL   P  
Sbjct: 149 LVDGRKVKAFESRGVLAIPSEAMAYACAREFS-EQKDYLNKLLMPLSDMCSGALTVAPQM 207

Query: 173 RPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDPLLKWVESEFGFK-PVVYSS 231
               I++LM  +  D ++ R+P        + E Q + I+P+ +W    F    P +   
Sbjct: 208 ITPRIDYLMSFYQNDNMYFRSPP-------IVEEQDRTINPVTEWFSHAFEVSVPRIVGI 260

Query: 232 FFGGKQEDGLIKTVENLMKKT-DDYELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELI 290
                      K  + L+  + + Y++ A+   A    SL++ + +F G + +  A+ + 
Sbjct: 261 GHPLIPPRATFKVRDALLAMSMNPYQVVALCVAAQFTSSLILPLAVFNGIVDLPTALSIN 320

Query: 291 RLEEDLQVDKWGLVEGGHDIDIADLRVQISSATV 324
           R EE       G++EG HDI  AD+  ++ +A V
Sbjct: 321 RAEERHNTRTEGIIEGYHDIRDADVVTKLCAAAV 354


>gi|340504685|gb|EGR31108.1| hypothetical protein IMG5_117510 [Ichthyophthirius multifiliis]
          Length = 203

 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 104/204 (50%), Gaps = 11/204 (5%)

Query: 125 KRPLKLPTLGLAKAIGAEWDYQQTDGIRPFMMPLMKLACTALE---RVPLTRPKIIEHLM 181
           K  L +PT  LA AI  E++ Q  + ++P  MP + +A  A++    + L R  + + + 
Sbjct: 2   KNQLAVPTFELALAIAHEYNIQD-EYLKPATMPFVAMAKKAIDIDCNMDL-RKSLEDSVG 59

Query: 182 KKFNQDLVFCRAPADNDLTSGVHERQVQKIDPLLKWVESEFGFKPVVYSSFFGGKQEDGL 241
           + F  D +  R        S + + Q ++++ +++++            +FF  +  +  
Sbjct: 60  QFFANDTILFRED------SELGDIQNKRLNNVIEYINKLLNISLEPTETFFTKELSEQE 113

Query: 242 IKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKW 301
           I+ ++  +++ D ++L +I        S  + I +    + I+E  EL RLEE  Q++++
Sbjct: 114 IQKIKKFIQEQDIWKLISIQQATINCKSSCLGISLINKYIGIQECFELARLEESYQINQY 173

Query: 302 GLVEGGHDIDIADLRVQISSATVF 325
           GLVEG HDID   LR+ +++A +F
Sbjct: 174 GLVEGFHDIDENTLRLNLATARLF 197


>gi|350295714|gb|EGZ76691.1| ATP12-domain-containing protein [Neurospora tetrasperma FGSC 2509]
          Length = 409

 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 82/321 (25%), Positives = 130/321 (40%), Gaps = 64/321 (19%)

Query: 65  IKGRKQETASSSSSSVTMPMSFMTGSIVG-----KRFYEKVSTREADDGNGWTVMLDYRT 119
           I  RK++ A   ++  T+P +  + S  G     +RF++ V     +D N   + LD R 
Sbjct: 77  ISRRKRQAAMLRAA--TLPPTAGSSSAPGGIGLKRRFWKSVHVATKNDMN--EIHLDSRP 132

Query: 120 LKTPSKRP---LKLPTLGLAKAIGAEWD--YQQTDGIRPFMMPLMKLACTALERVPL--- 171
           L+ P  +    L+L    LA A+  EWD         +  ++PL  L C AL+       
Sbjct: 133 LRRPDTKSIIRLRLTKPSLASALAIEWDQLVSAQQATKQHLIPLTSLVCRALDIADQDSL 192

Query: 172 ----TRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHE-----RQVQK------IDPLLK 216
                R  I   L++  + D + C APA      G +E     R+VQ+      +  L  
Sbjct: 193 GKTDIRNAIATVLLRYLDTDSLLCWAPAPEHPEDGRNEAGYTLREVQEEAYSSVVSFLTT 252

Query: 217 WVESEFGFKPVV-YSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIG 275
            V       PV   +S    +QE G  + V+  M     +ELAA++    A  SL++A  
Sbjct: 253 RVWPGVTIVPVFDETSIMPRQQEPGTREVVQGWMLGLSAWELAALERATLAGKSLLVAAR 312

Query: 276 IF-------------------------------RGKLQIEEAIELIRLEEDLQVDKWGLV 304
           +                                + +  +EEA + + LE D Q  +WG V
Sbjct: 313 LVVEWSGDGGNAVVQTPPAAEEEEEMNTTHQDNKKRWGVEEAAKAVSLEVDWQTTQWGEV 372

Query: 305 EGGHDIDIADLRVQISSATVF 325
           E  HD++  DLR Q+ SA + 
Sbjct: 373 EDTHDVEKVDLRRQLGSAVLL 393


>gi|225562557|gb|EEH10836.1| ATP synthase mitochondrial F1 complex assembly factor 2
           [Ajellomyces capsulatus G186AR]
          Length = 372

 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 71/281 (25%), Positives = 120/281 (42%), Gaps = 45/281 (16%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLG--LAKAIGAEWDY--QQTD 149
           +RF++ V  +E DDG  + + LD R ++TP+K+ L +P     LA AI  EWD       
Sbjct: 94  RRFWKDVHVKEVDDG--YQIFLDSRAVRTPAKKILTIPASKPHLAHAIALEWDLLVSAQQ 151

Query: 150 GIRPFMMPLMKLACTALERV-------PLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSG 202
            ++  ++PL  L   A + V          R +I +  M+  + D +   AP  +     
Sbjct: 152 ALKQHLIPLTSLTARAQDIVVEDAAGQNTIRNQITKATMRYLDTDTLLSWAPEKSIHDPD 211

Query: 203 VHER-------------QVQKIDPLLKWVESE----FGFKPVVYSSFFGGKQEDGLIKTV 245
           VH+              Q++   P++ ++ ++       +P +  +      +  L K V
Sbjct: 212 VHDLNGEEKSEKSLRDLQIRTARPIIDFLTAKVWPGIEIRPALEENSIMPTPQLPLTKEV 271

Query: 246 -ENLMKKTDDYELAAIDAIAAAAHSLVIAIGIF--------------RGKLQIEEAIELI 290
               +     YELA ++    A+ SL++A                  R +  IE+A    
Sbjct: 272 IRGWIYGLPAYELAGLERGVLASRSLLVAARFVIEWSEQFRHLQPEERREFGIEQAAAAS 331

Query: 291 RLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGLSRR 331
            LE   Q DKWG VE  HD+D  D+R Q+ S  + +G  +R
Sbjct: 332 TLEVTWQTDKWGEVEDTHDVDREDVRRQLGSVVLLVGGEQR 372


>gi|389694608|ref|ZP_10182702.1| chaperone required for the assembly of F1-ATPase [Microvirga sp.
           WSM3557]
 gi|388587994|gb|EIM28287.1| chaperone required for the assembly of F1-ATPase [Microvirga sp.
           WSM3557]
          Length = 244

 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 98/210 (46%), Gaps = 8/210 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+     E D    + + LD RT KTP K+ L +P+  LA A+  EW  Q  + I P
Sbjct: 14  KRFYKDAGVEERD--GLFHLTLDGRTAKTPGKQALAVPSRALAGALAEEWQGQGGE-IDP 70

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP+ ++  +A++ V   +  +++ L++    DLV+ RA     L +     Q     P
Sbjct: 71  STMPITRIVNSAIDGVSPRQRDVVDDLVRYAGSDLVYYRAGEPERLAAS----QNDAWGP 126

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDD-YELAAIDAIAAAAHSLVI 272
           +L W     G +  +        Q D  +  +   +++ +  + LAA+  +   + S++I
Sbjct: 127 VLDWARDTHGARFALGEGVMHVTQPDDAVAAIRRAIEEVESPFALAALHVMTTLSGSVLI 186

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           A+     ++ +++A     ++E  Q   WG
Sbjct: 187 ALAHAAEQMDVDQAWAAAHVDELYQESVWG 216


>gi|421588808|ref|ZP_16034048.1| hypothetical protein RCCGEPOP_08665, partial [Rhizobium sp. Pop5]
 gi|403706424|gb|EJZ21690.1| hypothetical protein RCCGEPOP_08665, partial [Rhizobium sp. Pop5]
          Length = 166

 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 73/132 (55%), Gaps = 7/132 (5%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY +V   E +   G+ + LD + ++TP+++ L +PT  LA+ + AEW+  Q + I P
Sbjct: 31  KRFYTEVGIAEHE--GGFAITLDGKMVRTPARQVLAVPTAALARLVAAEWE-AQAEVIDP 87

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP+ +L  TAL+ +      I E +++  + DL+  RA     L     ERQ ++ DP
Sbjct: 88  VTMPVTRLVNTALDGIVSNTQAIFEDILRFSSSDLLCYRADGPERLV----ERQAERWDP 143

Query: 214 LLKWVESEFGFK 225
           ++ W  ++ G +
Sbjct: 144 IIDWAANDLGAR 155


>gi|347529828|ref|YP_004836576.1| ATP synthase mitochondrial F1 complex assembly factor 2
           [Sphingobium sp. SYK-6]
 gi|345138510|dbj|BAK68119.1| ATP synthase mitochondrial F1 complex assembly factor 2
           [Sphingobium sp. SYK-6]
          Length = 232

 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 95/210 (45%), Gaps = 9/210 (4%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRF+++       DG GW + LD R ++TP++  L +P   +A+AI AEWD Q  + I P
Sbjct: 2   KRFWKEAQA--VADGEGWAIRLDGRPVRTPARALLVVPHAAMAQAIAAEWDAQGEE-IDP 58

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQ-DLVFCRAPADNDLTSGVHERQVQKID 212
             MP+   A   ++RV LT P      +  + + DL+  RA    D    +  RQ    +
Sbjct: 59  RTMPMTGFANATIDRV-LTGPGAFRGQVAAYAESDLLCYRA----DEPEALVARQNDVWE 113

Query: 213 PLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVI 272
           PLL W    FG    V +      Q    +  +   ++  D + LA    +     +LV 
Sbjct: 114 PLLDWARGRFGIAFAVTAGIVPVDQPARTLAALRGAVEALDPWLLAGAATMTQLGGTLVG 173

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
            + +  G  + E   +   L+E  Q ++WG
Sbjct: 174 TLALLHGATEAEALFDAASLDEHWQAEQWG 203


>gi|383642666|ref|ZP_09955072.1| ATP12 ATPase [Sphingomonas elodea ATCC 31461]
          Length = 225

 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 11/209 (5%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRF++ V+     DG    + LD R ++TP++ PL LPT  LA+A+  EW     + + P
Sbjct: 2   KRFWKTVAMA---DG---VIELDGRPVRTPARAPLALPTPQLAEAVAEEW-RSVGEELDP 54

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MPL  LA  A+++V          L +    DL+  RA    ++   + ERQ  + DP
Sbjct: 55  RTMPLTGLANAAIDQVAPNPAPFAADLARYGESDLLCYRA----EMPEPLVERQAAQWDP 110

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           LL W  + F       +      Q    I  ++ ++   D + LAA++ +   + SLV A
Sbjct: 111 LLGWARTRFDVHFETTAGIMHRPQPAATIARLQEVVAALDPFRLAALNPLVTISGSLVAA 170

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           + +  G    +      +L+ED Q ++WG
Sbjct: 171 LALLEGAADRDTVWRAAQLDEDWQAEQWG 199


>gi|238579423|ref|XP_002389052.1| hypothetical protein MPER_11871 [Moniliophthora perniciosa FA553]
 gi|215450904|gb|EEB89982.1| hypothetical protein MPER_11871 [Moniliophthora perniciosa FA553]
          Length = 217

 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 103/237 (43%), Gaps = 42/237 (17%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLG--LAKAIGAEWDYQQTDGI 151
           KRF++ V   +  DG  + V LD R LKTPS   L LP     +A  I  EW+  +T  I
Sbjct: 18  KRFWKHVDIEKRRDG--YVVTLDKRALKTPSGNTLLLPHAKHLVATLIATEWENTET-LI 74

Query: 152 RPFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKI 211
           +P  +P+             +R  + + L++  + D + C      D    +   Q +  
Sbjct: 75  KPHALPM-------------SREMVSKALLEYMDTDTI-CFY---QDYPEHLVAMQTEHW 117

Query: 212 DPLLKWVESEFGFKPVVYSS-FFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSL 270
           DP+L WV   FG +     S  F G+ ED   K  + L                A  +  
Sbjct: 118 DPILAWVRKRFGVQVNKSDSILFNGQPEDTKAKLAQAL----------------AGFNHW 161

Query: 271 VIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLG 327
            +A+  F   L IE+A    R+E + Q+ KWG VE  HD+D  ++  Q+ SA+  L 
Sbjct: 162 QMAVERF---LTIEQASRAARVEVESQIQKWGEVENTHDVDFQNIIRQLGSASCLLA 215


>gi|261205222|ref|XP_002627348.1| mitochondrial molecular chaperone [Ajellomyces dermatitidis
           SLH14081]
 gi|239592407|gb|EEQ74988.1| mitochondrial molecular chaperone [Ajellomyces dermatitidis
           SLH14081]
 gi|239611434|gb|EEQ88421.1| ATP12 chaperone [Ajellomyces dermatitidis ER-3]
 gi|327348556|gb|EGE77413.1| ATP12 chaperone [Ajellomyces dermatitidis ATCC 18188]
          Length = 384

 Score = 75.1 bits (183), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 118/286 (41%), Gaps = 50/286 (17%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLG--LAKAIGAEWDY--QQTD 149
           +RF++ V  +E DDG  + + LD R ++TP K+ L +P     LA AI  EWD       
Sbjct: 101 RRFWKDVHVKEVDDG--YQIFLDSRPVRTPEKKILIIPASKPHLAHAIALEWDLLVSAQQ 158

Query: 150 GIRPFMMPLMKLACTALERVP-------LTRPKIIEHLMKKFNQDLVFCRAPADNDLTSG 202
            ++  ++PL  L     +            R +I+  +M+    D +   AP  +   S 
Sbjct: 159 ALKQHLIPLTSLTARVQDLAAEDAAGQSTIREQIVASMMRYLETDTLLSWAPEKSFYDSH 218

Query: 203 VHER------------------QVQKIDPLLKWVESE----FGFKPVVY-SSFFGGKQED 239
           +H+                   Q++   P++ ++ ++       +P +  +S     Q  
Sbjct: 219 LHDMEASGEGVTGEKEESLRDIQIRTARPIVDFLTTKVWPGIEIRPALQENSILPSPQLP 278

Query: 240 GLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIF--------------RGKLQIEE 285
             ++ +   +     YELA ++    A+ SL++A                  R    IE+
Sbjct: 279 LTMEVIRGWIYGLPAYELAGLERGVLASKSLLVAARFVIEWSEQFRDLQAEGRRTFGIEK 338

Query: 286 AIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGLSRR 331
           A E   LE   Q DKWG VE  HD+D  D+R Q+ S  + +   RR
Sbjct: 339 AAEASTLEVTWQTDKWGEVEDTHDVDKEDVRRQLGSVVLLVSGERR 384


>gi|449296185|gb|EMC92205.1| hypothetical protein BAUCODRAFT_78594 [Baudoinia compniacensis UAMH
           10762]
          Length = 320

 Score = 75.1 bits (183), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 130/315 (41%), Gaps = 48/315 (15%)

Query: 51  TFSSPSDKINESIYIKGRKQETASSSSSSVTMPMSFMTGSIVGKRFYEKVSTREADDGNG 110
           + S P D++      K  + E    S  +   P    T   + KRF+  VS +  D   G
Sbjct: 14  SVSHPQDRVAR----KREQLERLRESQQAKVNPAKPQTA--LQKRFWRNVSVK--DTNEG 65

Query: 111 WTVMLDYRTLKTPSKRPLKLP--TLGLAKAIGAEWD--YQQTDGIRPFMMPLMKLACTAL 166
             V+LD R ++T S++ L LP     LA  I  EWD        ++   +PL  L   A+
Sbjct: 66  LQVLLDSRPVRTASRQILLLPHGKRALAACIALEWDALVSAQQALKHHYIPLTSLTSRAV 125

Query: 167 ERVPL--------TRPKIIEHLMKKFNQDLVFCRAPA------DNDLTSGVHERQVQKID 212
           + + +         R  I+  LM+    D + C AP       +N     +  RQ +  +
Sbjct: 126 D-IEVADRDGDSSVREAIVMTLMRYLGTDTLLCWAPERSIHEPENTGKKPLRHRQREVAE 184

Query: 213 PLLKWVESEF----GFKPVV-YSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAA 267
           P++ ++ +        +P++   S     Q +   + +   +     YELAA++    A 
Sbjct: 185 PIIAYLTAHILPGVDIRPILDEQSIMPTPQPEMTRQIIRGWVSGLPAYELAALERGVLAT 244

Query: 268 HSLVIAIGIF------------RGK----LQIEEAIELIRLEEDLQVDKWGLVEGGHDID 311
            SL+IA  +             RG       I+EA E   LE   Q ++WG VE  HD++
Sbjct: 245 KSLLIAARLLVEWSQEFAHLRRRGPETDGFGIDEAAEAATLEVMHQTEQWGEVEDTHDVE 304

Query: 312 IADLRVQISSATVFL 326
             DLR Q+ S  + +
Sbjct: 305 REDLRRQLGSVVLLV 319


>gi|182678297|ref|YP_001832443.1| ATP12 ATPase [Beijerinckia indica subsp. indica ATCC 9039]
 gi|182634180|gb|ACB94954.1| ATP12 ATPase [Beijerinckia indica subsp. indica ATCC 9039]
          Length = 273

 Score = 75.1 bits (183), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 106/215 (49%), Gaps = 13/215 (6%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY +      +   G+ + LD +  KTP+++ L LPTL  A+A+ AEW+ Q+ D I P
Sbjct: 38  KRFYREARAEPVE--GGFALTLDGKPAKTPARQDLVLPTLAAAEALAAEWNAQE-DIIDP 94

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MPL +LA +A++ V     + +E + +    DLV  RA   + L +     Q    DP
Sbjct: 95  SAMPLTRLANSAIDGVRAALMETVEEIARYGGSDLVCYRAEGPDSLVAA----QAAAWDP 150

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQ----EDGLIKTVENLM--KKTDDYELAAIDAIAAAA 267
           +L +   + G + +         Q    E  L+K V+     K    + +AA+  + +  
Sbjct: 151 VLAFAREKLGARFLCAEGVVFVTQPEEAEAALLKAVQFWANDKANAPFAVAALHVMTSLM 210

Query: 268 HSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
            S ++A+G+  G L+ EEA     ++ED Q+  WG
Sbjct: 211 GSALMALGVAHGLLRPEEAWASAHVDEDFQMRVWG 245


>gi|452002256|gb|EMD94714.1| hypothetical protein COCHEDRAFT_1128410 [Cochliobolus
           heterostrophus C5]
          Length = 367

 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 119/273 (43%), Gaps = 38/273 (13%)

Query: 90  SIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLG--LAKAIGAEWDYQQ 147
           S++ KRF++ VS +E     G  V LD+R ++ P+K+ L +P     LA AI  EWD   
Sbjct: 92  SMLAKRFWKDVSVKETH--GGLQVFLDHRPVRMPNKQILTVPASKPQLAAAIALEWDLLM 149

Query: 148 T--DGIRPFMMPLMKLACTALE-----RVPLT--RPKIIEHLMKKFNQDLVFCRAPA--- 195
           +    ++   +P+  LA  A++     +   T  R  I+ + M+  + D + C AP    
Sbjct: 150 SAQQALKNDYIPMTSLAARAIDIEAADKAGQTDIRNDILAYFMRVLSTDTLLCWAPEKVI 209

Query: 196 DNDLTSGVHERQVQK------IDPLLKWVESEFGFKPVV-YSSFFGGKQEDGLIKTVENL 248
           ++ L  G   RQ+Q+      I  L   V      KP +  +S    +Q     + +   
Sbjct: 210 NDTLQDGKTLRQIQEEVAMGIIAYLQTHVFPGVEIKPTLDPNSIIPVEQPKMTQEVIRGW 269

Query: 249 MKKTDDYELAAIDAIAAAAHSLVIAIGIFR---------------GKLQIEEAIELIRLE 293
                 YELA ++    A+ SL+++  +                  +  I EA E   LE
Sbjct: 270 CAGLPAYELAGLERAVLASKSLLVSARLVHEWSEAFAQSRPAAEGSRFGINEAAEASSLE 329

Query: 294 EDLQVDKWGLVEGGHDIDIADLRVQISSATVFL 326
              Q  +WG VE  HD+   DLR Q+ SA V +
Sbjct: 330 VKWQTVQWGEVEDTHDVQREDLRRQLGSAVVLV 362


>gi|148694658|gb|EDL26605.1| ATP synthase mitochondrial F1 complex assembly factor 2, isoform
           CRA_a [Mus musculus]
          Length = 184

 Score = 74.7 bits (182), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 88/175 (50%), Gaps = 7/175 (4%)

Query: 156 MPLMKLACTALERVPLTRPK--IIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
           M L  L  T+L+  P  R K  +I   +K  + D +  R      L     E Q  + DP
Sbjct: 1   MHLTTLCNTSLDN-PTQRSKDQLIRAAVKFLDTDTICYRVEEPETLV----ELQKNEWDP 55

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           +++W E  +G +    +S  G        + + + +   + + L  I+ + A   S+++ 
Sbjct: 56  VIEWAEKRYGMEIGSSTSIMGPSIPTQTREVLTSHLSSYNMWALQGIEFVVAQLKSMLLT 115

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGL 328
           +G+   +L +E+A+ L RLEE+ Q+ KWG +E  HD ++ +LR + ++ T+F+ L
Sbjct: 116 LGLIDLRLTVEQAVLLSRLEEEYQIQKWGNIEWAHDYELQELRARTAAGTLFVHL 170


>gi|385304715|gb|EIF48723.1| f1-atp synthase assembly protein [Dekkera bruxellensis AWRI1499]
          Length = 278

 Score = 74.7 bits (182), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 67/269 (24%), Positives = 118/269 (43%), Gaps = 36/269 (13%)

Query: 96  FYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPT--LGLAKAIGAEWDYQQTDGIRP 153
           F EKVS  E    N + +M+D +T+KTP    L++P     LA  +  EW    +  +RP
Sbjct: 12  FXEKVSCEET--PNVYKIMIDGKTIKTPLGFXLEIPKEKQSLAYLLTNEWKSLPSLHVRP 69

Query: 154 FMMPLMKLACTALE----------RVPLTRPKIIEHLMKKF-NQDLVFCRAPADNDLTSG 202
           +++ L  L+C A++          +  +  P+ I+ L+ K+ + D +   +P   D    
Sbjct: 70  YJLTLTSLSCRAIDLAKSXGDEDAKAKIGDPETIKTLLLKYLDTDTLLVFSPV-KDCEGE 128

Query: 203 VHERQVQKIDPLLKWVESEF------GFKPVV------YSSFFGGKQEDGLIKTVENLMK 250
           + + Q +   PL K +E  F      G   V+       S   G KQ +     V+  + 
Sbjct: 129 LRKEQQKLYYPLKKEMEEFFTQYSKDGQNIVLKELDTEVSGLVGNKQSEETRNAVKKFLD 188

Query: 251 KTDDYELAAIDAIAAAAHSLVIAIGIFRGK-------LQIEEAIELIRLEEDLQVDKWGL 303
             D +EL A++       SL+  + + R           +++      LE  +Q  +WG 
Sbjct: 189 SLDTWELVALERTTLTCKSLLCGVAVVRKNRPDDQFDYSLDDLARAATLETVMQTKRWGE 248

Query: 304 VEGGHDIDIADLRVQISSATVFLGLSRRN 332
           VE  HD++  D+R ++ SA+  L   + N
Sbjct: 249 VEDTHDVEKVDVR-RVLSASSLLCFRKXN 276


>gi|87200854|ref|YP_498111.1| ATP12 ATPase [Novosphingobium aromaticivorans DSM 12444]
 gi|87136535|gb|ABD27277.1| ATP12 ATPase [Novosphingobium aromaticivorans DSM 12444]
          Length = 230

 Score = 74.7 bits (182), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 96/209 (45%), Gaps = 7/209 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY++V+   A+   G+ V LD R ++T  KR   +PT  LA+A+ AEW   Q + I P
Sbjct: 2   KRFYKQVTVEAAE--GGFAVKLDGRAIRTVGKRTQVVPTHALAEAMAAEW-AGQGEEIDP 58

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
                  +A  A++ V      +I  L+     D +  RA  D    +    RQ    +P
Sbjct: 59  QAFLFRDMADYAIDVVAQDPASVIGELLPYAETDTLCYRAEPDEAFAA----RQRLMWEP 114

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           LL   E+  G + V  S      Q    +  ++  ++    ++LAA+   A+ A SLV+ 
Sbjct: 115 LLADAETRLGVRFVRVSGIMHKPQPPETLARLKVELEGLGAFQLAALRNTASLAASLVLG 174

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           +   R    I+   +   LEED Q + WG
Sbjct: 175 LATLRPDADIDALWDAANLEEDWQAELWG 203


>gi|149052828|gb|EDM04645.1| ATP synthase mitochondrial F1 complex assembly factor 2
           (predicted), isoform CRA_b [Rattus norvegicus]
 gi|149052830|gb|EDM04647.1| ATP synthase mitochondrial F1 complex assembly factor 2
           (predicted), isoform CRA_b [Rattus norvegicus]
          Length = 184

 Score = 74.7 bits (182), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 88/176 (50%), Gaps = 7/176 (3%)

Query: 156 MPLMKLACTALERVPLTRPK--IIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
           M L  L  T+L+  P  R K  +I   +K  + D +  R      L     E Q  + DP
Sbjct: 1   MHLTTLCNTSLDN-PTQRNKDQLIRAAVKFLDTDTICYRVEEPETLV----ELQKNEWDP 55

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           +++W E  +G +    +S  G        + + + +   + + L  I+ + A   S+++ 
Sbjct: 56  IIEWAEKRYGMEIGSSTSIMGPSIPTQTREVLTSHLASYNMWALQGIEFVVAQLKSMLLT 115

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGLS 329
           +G+   +L +E+A+ L RLEE+ Q+ KWG +E  HD ++ +LR + ++ T+F+ L 
Sbjct: 116 LGLIDLRLTVEQAVLLSRLEEEYQIQKWGNIEWAHDYELQELRARTAAGTLFVHLC 171


>gi|334141384|ref|YP_004534590.1| ATP12 ATPase [Novosphingobium sp. PP1Y]
 gi|333939414|emb|CCA92772.1| ATP12 ATPase [Novosphingobium sp. PP1Y]
          Length = 232

 Score = 74.3 bits (181), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 100/209 (47%), Gaps = 7/209 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY++V+  E D  +GW V+LD R +KT   R   +PT+ LA+A+  EW  Q  D I P
Sbjct: 2   KRFYKEVTVGETD--SGWRVLLDGRPIKTAGGRTQIVPTMPLAEALAEEWAAQGED-IDP 58

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
               L  L   A++ V + R + I  ++     D +  RA    D    + +RQ +  +P
Sbjct: 59  AGFVLRDLCDFAIDAVAVDRAEAIRGMVPYAETDTLCYRA----DPEDALFQRQQEVWEP 114

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           LLK  E  +G      S      Q    +  +E L+ + DD+ LA +  + + A SLVI 
Sbjct: 115 LLKSAEERWGLTFTRVSGIIHKPQPPRTLARLEQLLGEQDDFTLAGLRMLTSLAASLVIG 174

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           +   +     E       LEED Q++ WG
Sbjct: 175 LFAAQPDADSETLWRAANLEEDWQIELWG 203


>gi|46129312|ref|XP_389017.1| hypothetical protein FG08841.1 [Gibberella zeae PH-1]
          Length = 365

 Score = 73.9 bits (180), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 72/279 (25%), Positives = 120/279 (43%), Gaps = 43/279 (15%)

Query: 89  GSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPL-KLPTL--GLAKAIGAEWDY 145
           G  + KRF++ V+ +E D      V LD R L+ PS + + ++P     LA A+  EWD 
Sbjct: 83  GGALKKRFWKDVTVQEVD--GALQVFLDTRPLRHPSTKAIVRIPITKPDLASALALEWDL 140

Query: 146 QQT--DGIRPFMMPLMKLACTALE----------RVPLTRPKIIEHLMKKFNQDLVFCRA 193
             +  D  R  ++PL  L C A++           +   R  I   L++  + D + C  
Sbjct: 141 LTSAQDATRHHLIPLTSLTCRAIDIAEADNAPGSDISEIRSSIATVLLRYLDTDSILCWN 200

Query: 194 P--ADNDLTSGVHE--RQVQK------IDPLLKWVESEFGFKPVVYS-SFFGGKQEDGLI 242
           P   + DL +   E  R VQK      +  L   V      +PV+   S     Q  G+ 
Sbjct: 201 PPAGEYDLKNEAGESLRDVQKRTADDIVSFLTTHVWPGITIQPVLDGHSLLPQAQAPGVR 260

Query: 243 KTVENLMKKTDDYELAAIDAIAAAAHSLVIAI---------GIFRGKLQ------IEEAI 287
           + ++  +   D +E+A ++    A  SL+ A           + +G L       +E+A 
Sbjct: 261 EIIQGWIVGLDAFEIAGLERAGLAGKSLIAAARLVAEWSEGSVGKGSLNTGKKFGVEDAA 320

Query: 288 ELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFL 326
               LE + Q  +WG VE  HD++  D+R Q+ S  + +
Sbjct: 321 VATSLEVNWQTMQWGEVEDTHDVNKEDVRRQLGSVVLLV 359


>gi|218659527|ref|ZP_03515457.1| hypothetical protein RetlI_07618 [Rhizobium etli IE4771]
          Length = 187

 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 76/144 (52%), Gaps = 7/144 (4%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY +V+   A    G+ + LD + ++TP+++ L +PT  LA+ + AEW  Q  + I P
Sbjct: 31  KRFYAEVAV--AQHEGGFAITLDGKMVRTPARQVLAVPTEALAQLVAAEWQAQGQE-IDP 87

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP+ +L  TAL+ V      I E +++  + DL+  RA     L     ERQ ++ DP
Sbjct: 88  VTMPVTRLVNTALDGVATNAQAIFEDILRFSSSDLLCYRADGPELLV----ERQRERWDP 143

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQ 237
           ++ W  ++ G + ++       +Q
Sbjct: 144 VIDWAANDLGARFILIEGVMHHEQ 167


>gi|307211938|gb|EFN87852.1| ATP synthase mitochondrial F1 complex assembly factor 2
           [Harpegnathos saltator]
          Length = 228

 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/222 (27%), Positives = 106/222 (47%), Gaps = 16/222 (7%)

Query: 114 MLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRPFMMPLMKLACTALER-VPLT 172
           MLD R LKTP  +  ++ +  LA A+ AEWD Q+ + I    M L  L  T L+     T
Sbjct: 1   MLDQRKLKTPQGKIFEVNSKPLALAVAAEWDAQK-EIIDRGNMHLTALCNTVLDNPQNCT 59

Query: 173 RPKIIEHLMKKFNQDLV-FCRAPADNDLTSGVHERQVQKIDPLLKWVESEFGFKPVVYSS 231
           +  ++ +++     D V F  + AD      +++ Q++K +P++ W    +        S
Sbjct: 60  KVDLVNNIVNCLEMDTVLFYSSEADE-----LYKLQIEKWEPIVHWFCKHYNVNIAGTQS 114

Query: 232 FFG-GKQEDGLIKTVENLMKKTDD--YELA-AIDAIAAAAHSLVIAIGIFRGKLQIEEAI 287
               G   +       +LM    +  Y L  A+D +     S+++ +      + + EA+
Sbjct: 115 IEAPGVSLETKTAITRHLMSHNFNSIYGLVYAVDGLK----SVILTLATAERTINVSEAV 170

Query: 288 ELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGLS 329
           +L RLEE  Q+  WG VE  H+    DL+ ++S+A +F+ L+
Sbjct: 171 DLSRLEEKYQISHWGNVEWHHEYSKHDLQARLSAAMLFVYLN 212


>gi|240281011|gb|EER44514.1| ATP synthase F1 complex assembly factor 2 [Ajellomyces capsulatus
           H143]
 gi|325092493|gb|EGC45803.1| ATP synthase mitochondrial F1 complex assembly factor 2
           [Ajellomyces capsulatus H88]
          Length = 371

 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 70/280 (25%), Positives = 120/280 (42%), Gaps = 44/280 (15%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLG--LAKAIGAEWDY--QQTD 149
           +RF++ V  +E DDG  + + LD R ++TP+K+ L +P     LA AI  EWD       
Sbjct: 94  RRFWKDVHVKEVDDG--YQIFLDSRAVRTPAKKILTIPASKPHLAHAIALEWDLLVSAQQ 151

Query: 150 GIRPFMMPLMKLACTALERV-------PLTRPKIIEHLMKKFNQDLVFCRAPAD------ 196
            ++  ++PL  L   A +            R +I +  M+  + D +   AP        
Sbjct: 152 ALKQHLIPLTSLTARAQDIAVEDAAGQNTIRNQITKATMRYLDTDTLLSWAPKSIHDPDV 211

Query: 197 NDLTS------GVHERQVQKIDPLLKWVESE----FGFKPVVYSSFFGGKQEDGLIKTV- 245
           +DL         + + Q++   P++ ++ ++       +P +  +      +  L K V 
Sbjct: 212 HDLNGEEKSEKSLRDLQIRTARPIIDFLTAKVWPGIEIRPALEENSIMPTPQLPLTKEVI 271

Query: 246 ENLMKKTDDYELAAIDAIAAAAHSLVIAIGIF--------------RGKLQIEEAIELIR 291
              +     YELA ++    A+ SL++A                  R +  IE+A     
Sbjct: 272 RGWIYGLPAYELAGLERGVLASRSLLVAARFVIEWSEQFRHLQPEERREFGIEQAAAAST 331

Query: 292 LEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGLSRR 331
           LE   Q DKWG VE  HD+D  D+R Q+ S  + +G  +R
Sbjct: 332 LEVTWQTDKWGEVEDTHDVDREDVRRQLGSVVLLVGGEQR 371


>gi|171680119|ref|XP_001905005.1| hypothetical protein [Podospora anserina S mat+]
 gi|170939686|emb|CAP64912.1| unnamed protein product [Podospora anserina S mat+]
          Length = 456

 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 69/273 (25%), Positives = 115/273 (42%), Gaps = 53/273 (19%)

Query: 109 NGWTVMLDYRTLKTPSKR-----PLKLPTLGLAKAIGAEWD--YQQTDGIRPFMMPLMKL 161
             + + LD R L+ P+ +     PL  P L  A A+  EWD      +  +  ++PL  L
Sbjct: 187 GAYQIHLDSRPLRHPTTKSIIRIPLSKPQL--AHALAVEWDQLLSAQEATKQHLIPLTSL 244

Query: 162 ACTALE-----------RVPLTRPKIIEHLMKKFNQDLVFCRAP-AD-----------ND 198
            C A++             P+ R  I+  +M+  + D + C AP AD           ND
Sbjct: 245 VCRAVDIGAEDAAHPGGPGPI-RESIVTGMMRYLDTDSLLCWAPPADSTNPHAPSSYLND 303

Query: 199 LTSGVHERQVQKIDPLLKWVESEF----GFKPVV--YSSFFGGKQEDGLIKTVENLMKKT 252
               + + Q +    ++ W+ S+        PV+    S    KQE G+ + V+  +   
Sbjct: 304 EGKSLRDLQEEAAGGVVGWLTSKVWPGVNIVPVLEDSGSILPRKQEPGVREVVQGWVLGL 363

Query: 253 DDYELAAIDAIAAAAHSLVIAIGIF--------------RGKLQIEEAIELIRLEEDLQV 298
             +ELA I+    A  SL+ A  +                 K  +EEA  ++ +E + Q 
Sbjct: 364 SCWELAGIERATLAGKSLLTAARLVCEWSEERQDLTQGEERKFGVEEAARVVSVEVEWQT 423

Query: 299 DKWGLVEGGHDIDIADLRVQISSATVFLGLSRR 331
            +WG VE  HD++  DLR Q+ S  + +G + R
Sbjct: 424 RRWGEVEDTHDVEKEDLRRQLGSVILLVGGTGR 456


>gi|402820827|ref|ZP_10870390.1| hypothetical protein IMCC14465_16240 [alpha proteobacterium
           IMCC14465]
 gi|402510330|gb|EJW20596.1| hypothetical protein IMCC14465_16240 [alpha proteobacterium
           IMCC14465]
          Length = 234

 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/214 (30%), Positives = 98/214 (45%), Gaps = 11/214 (5%)

Query: 92  VGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDG- 150
           + +RFYE VS     +G  + V+LD R L TP+K+ L LP   LA+AI  EW  +Q DG 
Sbjct: 1   MARRFYETVSVEAVSEG--FIVLLDDRKLMTPAKKLLALPYAKLAEAIAEEW--RQVDGE 56

Query: 151 IRPFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQK 210
           I    MP+ +L  TAL+RV        +        DL+  RA     L     +RQ + 
Sbjct: 57  ILLSDMPMSRLVYTALDRVSEAYDATAQAFASYGETDLLCYRATHPEALV----QRQDEI 112

Query: 211 IDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVEN--LMKKTDDYELAAIDAIAAAAH 268
             P L WV+S +     + +     +Q    I+ +    L K+ + Y L  +   A    
Sbjct: 113 WSPYLDWVKSTYDVSLQIGAGITPIEQSRESIEALTQVALGKEPNPYRLTGLAHGAGLLG 172

Query: 269 SLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           S V+A+ +  G  + E       L+E  Q ++WG
Sbjct: 173 SAVLALQMESGDDKTENIWHAAFLDEFFQFEQWG 206


>gi|383771172|ref|YP_005450237.1| hypothetical protein S23_29170 [Bradyrhizobium sp. S23321]
 gi|381359295|dbj|BAL76125.1| hypothetical protein S23_29170 [Bradyrhizobium sp. S23321]
          Length = 264

 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 99/212 (46%), Gaps = 8/212 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY++    EA+   G+ + LD + ++TPS R + +P+  LA A+ AE    Q + I P
Sbjct: 30  KRFYKEAGATEAE--GGFAITLDGKPIRTPSGRQVVIPSRALADAVAAE-WAAQGETIDP 86

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MPL ++A + +E V      + + L K F  DL+F RA     L +    R+    DP
Sbjct: 87  VTMPLTRIANSVVEGVVDRVELVTDDLAKYFESDLLFYRAGHPEALVA----REAAHWDP 142

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           LL W     G   ++       KQ D  I+     +   D + +AA+  +     S ++A
Sbjct: 143 LLFWAAETLGAHFILSEGIMHVKQPDEAIEAARGALPG-DAWSIAALHVVTTLTGSALLA 201

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWGLVE 305
           + +  G     +      ++ED  V+KWG  E
Sbjct: 202 LALAHGVRDAGQVWAAAHVDEDWNVEKWGADE 233


>gi|425772967|gb|EKV11346.1| Oxysterol binding protein (Osh1), putative [Penicillium digitatum
           Pd1]
 gi|425778667|gb|EKV16775.1| Oxysterol binding protein (Osh1), putative [Penicillium digitatum
           PHI26]
          Length = 1577

 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 75/297 (25%), Positives = 129/297 (43%), Gaps = 49/297 (16%)

Query: 76  SSSSVTMPMSFMTGS------IVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLK 129
           +SS   +P+S    S       + KRF++ V      D   + ++LD R ++TP+K  L 
Sbjct: 62  NSSDAELPVSEGEASRHKLTAALKKRFWKDVHVHGKSDE--YQILLDKRPVRTPAKEVLS 119

Query: 130 LPTLG--LAKAIGAEWDYQQT--DGIRPFMMPLMKLACTAL-------ERVPLTRPKIIE 178
           +P+    LA A+  EWD   +    ++  ++P+  LA  A        E    TR +II 
Sbjct: 120 IPSTKPHLAYAVALEWDVMASAQQALKSHLIPMTSLAARATDIAREDAEGNGTTRKQIIT 179

Query: 179 HLMKKFNQDLVFCRAP-----------ADNDLTSGVHERQVQKIDPLLKWVESEF--GFK 225
             M+  + D + C  P           AD +    + + Q++    ++ ++ ++   G +
Sbjct: 180 TAMRYLDTDTLLCWEPERQRHALERTTADGEPIESLRQIQMRVAGTVMSFLSTKVWPGLE 239

Query: 226 --PVV-YSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGI------ 276
             P++  +S     Q  G   T+   + +   Y+LA ++    A+ SL+IA+ +      
Sbjct: 240 IIPILDTNSILPLSQPKGTKDTICTWVSELSAYDLAGLERAILASKSLLIAVRLVVEWSE 299

Query: 277 -FR-------GKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVF 325
            FR        K  IEEA E   LE   Q   WG VE  HD+   DL+ Q+ S  + 
Sbjct: 300 NFRHIQRPEVKKFGIEEAAEASSLEVTWQTKMWGEVEDTHDVGKEDLKRQLGSVVIL 356


>gi|255954877|ref|XP_002568191.1| Pc21g11600 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211589902|emb|CAP96057.1| Pc21g11600 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 361

 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 79/305 (25%), Positives = 130/305 (42%), Gaps = 51/305 (16%)

Query: 70  QETASSSSSSVTMPMS------FMTGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTP 123
           QET  S S    +P S      +   + + KRF++ V      DG  + V+LD R ++TP
Sbjct: 57  QET--SKSKDAELPASESEASRYKLTAALKKRFWKDVHVHGKLDG--YQVLLDKRPVRTP 112

Query: 124 SKRPLKLPTLG--LAKAIGAEWDYQQT--DGIRPFMMPLMKLACTAL-------ERVPLT 172
            K  L +P+    LA A+  EWD   +    ++   +P+  LA  A        E    T
Sbjct: 113 MKEVLSIPSTKPHLAHAVALEWDVMTSAQQALKSHSIPMTSLAARATDIAREDAEGDSTT 172

Query: 173 RPKIIEHLMKKFNQDLVFCRAP-----------ADNDLTSGVHERQVQKIDPLLKWVESE 221
           R +II   M+  + D + C  P           AD      + + Q +    ++ ++ ++
Sbjct: 173 RKQIITTAMRYLDTDTLLCWEPERQMHVLERTTADGKPIETLRQIQTRIAGNVMSFLSTK 232

Query: 222 F--GFK--PVV-YSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGI 276
              G +  P++  +S     Q  G   ++   + +   ++LA ++    A+ SL+IA+ +
Sbjct: 233 VWPGLEIVPILDTNSILPLSQPKGTKDSICTWVSELSAFDLAGLERAILASKSLLIAVRL 292

Query: 277 -------FR-------GKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSA 322
                  FR        K  IEEA E   LE   Q D WG VE  HD+   DL+ Q+ S 
Sbjct: 293 VVEWSENFRHIQRPEAKKFGIEEAAEASSLEVTWQTDMWGEVEDTHDVGKEDLKRQLGSV 352

Query: 323 TVFLG 327
            V + 
Sbjct: 353 VVLVS 357


>gi|451897815|emb|CCT61165.1| predicted protein [Leptosphaeria maculans JN3]
          Length = 372

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 77/318 (24%), Positives = 136/318 (42%), Gaps = 46/318 (14%)

Query: 53  SSPSDKINESIYIKGRKQETASSSSSSVTM----PMSFMTGSIVGKRFYEKVSTREADDG 108
           ++P+ + +E++    RK++ A     +  M      S    +++ KRF++ V  +EAD  
Sbjct: 54  ATPTPEPSEAMARVARKRKQADMMKQAREMRNVSSASSKPKTMLAKRFWKDVHVKEAD-- 111

Query: 109 NGWTVMLDYRTLKTPSKRPLKLPTLG--LAKAIGAEWDY--QQTDGIRPFMMPLMKLACT 164
            G  V LD+R ++  +K+ L +P     LA AI  EWD        ++   +P+  LA  
Sbjct: 112 GGLQVFLDHRPVRMANKQILTVPPTKQQLATAIALEWDLLTSAQQALKADYIPMTSLAAR 171

Query: 165 AL-------ERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHE----RQVQK--- 210
           A+       E     R  I+ +LM+ F  D + C AP +  L    H+    R+ Q+   
Sbjct: 172 AIDIETADAEGRTKVRDDILNYLMRVFTTDTLLCWAP-ETVLNEVKHDGKTLREQQEDVA 230

Query: 211 ---IDPLLKWVESEFGFKPVV-YSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAA 266
              +  L + V      +P +   S     Q +   + +         YELA ++    A
Sbjct: 231 TKILAYLTRHVWPGVEIRPTLDPDSIIPVSQSELTQQIIRGWCAGLPAYELAGLERAVLA 290

Query: 267 AHSLVI-----------------AIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHD 309
           + SL++                 A+     +  +++A E   LE + Q  +WG VE  HD
Sbjct: 291 SKSLLVGARLVFEWAEAFAQARKAVPTEASRFGMQDAAEACSLEVNWQTRQWGEVEDTHD 350

Query: 310 IDIADLRVQISSATVFLG 327
           ++  DLR Q+ SA + + 
Sbjct: 351 VEKEDLRRQLGSAILLVA 368


>gi|296811660|ref|XP_002846168.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
 gi|238843556|gb|EEQ33218.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
          Length = 358

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 77/301 (25%), Positives = 122/301 (40%), Gaps = 47/301 (15%)

Query: 69  KQETASSSSSSVTMPMSFMTGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPL 128
           KQE  S SSS  + P      S + KRF++ V  +EA  G+   + LD R ++TP K+ L
Sbjct: 66  KQEAGSVSSSRASKP------SPLRKRFWKDVHVKEAAGGH--QIYLDSRPVRTPEKKIL 117

Query: 129 KLPTLG--LAKAIGAEWDYQQT--DGIRPFMMPLMKLACTALE-------RVPLTRPKII 177
            +P     +A AI  EWD  +T     +  ++P+  L   A +        V   R +I 
Sbjct: 118 TVPASKPHVAHAIALEWDLLKTAQHATKYHLIPMTSLTGRAEDIADEDSRGVTTIRDEIT 177

Query: 178 EHLMKKFNQDLVFCRAPADNDLTSG--------VHERQVQKIDP----LLKWVESEFGFK 225
             +++    D +   AP       G        + E+Q++   P    L+  V      K
Sbjct: 178 RVMLRYLETDTLLSWAPEKEPEYVGRSEEKRETLREKQIKTAQPIITSLVSTVWPGVELK 237

Query: 226 PVV-YSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGI-------F 277
           P +  +S     Q    +  +   +     Y+LA ++    A  SL++   +       F
Sbjct: 238 PTLDANSIMPLPQSQETLDVIRGWLSTLSPYDLAGVERAGIATKSLLVGARVVIEWSENF 297

Query: 278 RG--------KLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGLS 329
           R            IEEA     LE   Q + WG VE  HD++  DLR Q+ S  + +   
Sbjct: 298 RHLRPSNASRTFGIEEAAHASSLEVRWQTENWGEVEDTHDVEKEDLRRQLGSVILLVSGR 357

Query: 330 R 330
           R
Sbjct: 358 R 358


>gi|261333605|emb|CBH16600.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
           DAL972]
          Length = 380

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 124/274 (45%), Gaps = 18/274 (6%)

Query: 61  ESIYIKGRKQETASS----SSSSVTMPMSFMTGSIVGKR-FYEKVSTREADDGN-GW-TV 113
           E ++ +  KQE   S      S   M +S    S    R F++ V  R+ D+ + GW TV
Sbjct: 89  EKLFQQLDKQEKEESRVLEEDSLYQMDISLRESSRAAVRVFWKDVDVRKLDEEHEGWYTV 148

Query: 114 MLDYRTLKT-PSKRPLKLPTLGLAKAIGAEWDYQQTDGIRPFMMPLMKLACTALERVPLT 172
           ++D R +K   S+  L +P+  +A A   E+  +Q D +   +MPL  +   AL   P  
Sbjct: 149 LVDGRKVKAFESRGVLAIPSEAMAYACAREFS-EQKDYLNKLLMPLSDMCSGALTVAPQM 207

Query: 173 RPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDPLLKWVESEFGFK-PVVYSS 231
               I++LM  +  D ++ R+P        + E Q + I+P+ +W    F    P +   
Sbjct: 208 ITPRIDYLMSFYQNDNMYFRSPP-------IVEEQDRIINPVTEWFSHAFEVSVPRIVGI 260

Query: 232 FFGGKQEDGLIKTVENLMKKT-DDYELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELI 290
                      K  + L+  + + Y++ A+   A    SL++ + +F   + +  A+ + 
Sbjct: 261 GHPLIPPRATFKVRDALLAMSMNPYQVVALCVAAQFTSSLILPLAVFNSIVDLPTALSIN 320

Query: 291 RLEEDLQVDKWGLVEGGHDIDIADLRVQISSATV 324
           R EE       G++EG HDI  AD+  ++ +A V
Sbjct: 321 RAEERHNTRTEGIIEGYHDIRDADVVTKLCAAAV 354


>gi|169598848|ref|XP_001792847.1| hypothetical protein SNOG_02231 [Phaeosphaeria nodorum SN15]
 gi|160704480|gb|EAT90443.2| hypothetical protein SNOG_02231 [Phaeosphaeria nodorum SN15]
          Length = 1583

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 73/273 (26%), Positives = 120/273 (43%), Gaps = 36/273 (13%)

Query: 90  SIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLG--LAKAIGAEWDY-- 145
           S++ KRF++  + +E D   G  V LD R ++TP+K  L +P     LA AI  EWD   
Sbjct: 90  SLLKKRFWKDSTVKETDGTEGLQVFLDSRPVRTPTKDILTVPASKPQLATAIALEWDLLL 149

Query: 146 QQTDGIRPFMMPLMKLACTAL-------ERVPLTRPKIIEHLMKKFNQDLVFCRAPAD-- 196
                +R   +P+  LA  AL       +     R +++  LM+    D + C AP +  
Sbjct: 150 SAQQALRTHYIPMTSLAARALDIEQADAQGKEHVRNEVLNLLMRYLATDTLLCWAPENVM 209

Query: 197 ND-LTSGVHERQVQK------IDPLLKWVESEFGFKPVVY-SSFFGGKQEDGLIKTVENL 248
           ND   +G   R++Q+      I  L   +      KP++   S    +Q     + +   
Sbjct: 210 NDHRRNGKTLRELQQEMATPIIGHLTTHIWPGVEIKPILEPDSIMPVEQPAMTQQVIRGW 269

Query: 249 MKKTDDYELAAIDAIAAAAHSLVIAIGIF---------------RGKLQIEEAIELIRLE 293
           +     +ELA ++    A+ SL++++ +                  +  IEEA E   LE
Sbjct: 270 LAGLPAFELAGLERAVLASKSLLVSVRLIYEWGEAFTQSRKPANAARFGIEEAAEAASLE 329

Query: 294 EDLQVDKWGLVEGGHDIDIADLRVQISSATVFL 326
              Q  +WG VE  HD++  DLR Q+ SA + +
Sbjct: 330 VRWQTGQWGEVEDTHDVEKEDLRRQLGSAILLV 362


>gi|359397963|ref|ZP_09190987.1| ATP12 ATPase [Novosphingobium pentaromativorans US6-1]
 gi|357600381|gb|EHJ62076.1| ATP12 ATPase [Novosphingobium pentaromativorans US6-1]
          Length = 232

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 99/209 (47%), Gaps = 7/209 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY++V+  E D  +GW V+LD R +KT   R   +PT  LA+A+  EW  Q  D I P
Sbjct: 2   KRFYKEVTVGETD--SGWRVLLDGRPIKTAGGRTQIVPTRPLAEALAEEWAAQGED-IDP 58

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
               L  L   A++ V + R + I  ++     D +  RA    D    + +RQ +  +P
Sbjct: 59  AGFVLRDLCDFAIDAVAVDRAEAIRGMVPYAETDTLCYRA----DPEDALFQRQQEVWEP 114

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           LLK  E  +G      S      Q    +  +E L+ + DD+ LA +  + + A SLVI 
Sbjct: 115 LLKSAEERWGLTFTRVSGIIHKPQPPRTLARLEQLLGEHDDFTLAGLRMLTSLAASLVIG 174

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           +   +     E       LEED Q++ WG
Sbjct: 175 LFAAQPDADSETLWRAANLEEDWQIELWG 203


>gi|154335445|ref|XP_001563961.1| conserved hypothetical protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134060992|emb|CAM38011.1| conserved hypothetical protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 382

 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 76/285 (26%), Positives = 123/285 (43%), Gaps = 30/285 (10%)

Query: 56  SDKINESIYIKGRKQETASS----SSSSVTMPMSFMTGSIVGKR-FYEKVSTREADDGN- 109
           S K  E +  +  +QE ASS      S   M +S    S    R F++ V   E  D   
Sbjct: 83  SSKQLEEVMHRFEEQENASSRVLSEDSLYQMDVSLKPRSSGAVRVFWKDVDVVELKDHYP 142

Query: 110 GW-TVMLDYRTLKT-PSKRPLKLPTLGLAKAIGAEWDYQQTDGIRPFMMPLMKLACTALE 167
           GW  V++D R +K   S + L +P+  +A     E+  +QT  I   +MP+  +   AL 
Sbjct: 143 GWFAVVVDGRKVKAMKSSQVLAVPSEAMACCCAQEY-AEQTGYINQLLMPMSDICSGALH 201

Query: 168 RVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDPLLKWVESEF----- 222
             P      I++L+  F  D ++ RA       + +  +Q   I P++ W E  +     
Sbjct: 202 IAPQMLAPRIDYLLSFFQSDNLYFRA-------APIAAKQDVMIAPIISWFERVYEMDVP 254

Query: 223 ---GFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRG 279
              G      +     K  D LI    N       Y++ A+   A    SL++ + +F G
Sbjct: 255 RVVGIGDPHITPHASAKMRDALIAMNMN------PYQVLAMCVTAQFTSSLLLPLALFSG 308

Query: 280 KLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATV 324
            + +  A+ + R EE   + + GLVEG HDI  AD+  +I + T+
Sbjct: 309 VVDLPTALAINRAEEHHSISEAGLVEGYHDIREADVVTKICACTM 353


>gi|346976355|gb|EGY19807.1| ATP12 protein [Verticillium dahliae VdLs.17]
          Length = 410

 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 97/388 (25%), Positives = 147/388 (37%), Gaps = 85/388 (21%)

Query: 21  SFTTFRTRHLCSVATVHQSPQYDDDPTSSFTFSSPSDKINESIYIKGRKQETASSSSSSV 80
           S T F+T  +  V      P+    P S+  FS+ S    E+     R++  A     + 
Sbjct: 31  SSTVFKTADVAPVVGTGPPPEA---PRSAAEFSAESKLSQEAAAKLARRKRQAEMLEMAQ 87

Query: 81  TMPMSFMTGSIVG---KRFYEKVSTREADDGNGWTVMLDYRTLKTP-SKRPLKLPTLG-- 134
            +  +     + G   +RF+++V   E D      VMLD R L+ P +   ++LPT    
Sbjct: 88  EIRNAASMKGVKGGLKRRFWKEVRVEEVD--GALQVMLDNRPLRHPGTTNIIRLPTSKPH 145

Query: 135 LAKAIGAEWD-----YQQTDGIRPFMMPLMKLACTAL--------ERVPLTRP------- 174
           LA A+  EWD     YQ T   +  ++PL  L C A+        E VP   P       
Sbjct: 146 LASAVAIEWDLLTSAYQAT---KQHLIPLTSLICRAIDIEANDNGEEVPSASPAADGEEA 202

Query: 175 --------------------KIIEHLMKKFNQDLVFCRAPA---------DNDLTSGVHE 205
                               +I   LM+  + D + C AP          D D    V E
Sbjct: 203 PAAPAPFSSTANPDDVTIRAQIATTLMRYLDTDAMLCWAPPPGPMDMRNEDGDGLRDVQE 262

Query: 206 RQVQKIDPLLK-WVESEFGFKPVV-YSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAI 263
           +    +   L+  V       PV+  ++     Q DG+  TV+  +     +ELA ++  
Sbjct: 263 KTAVDVLAYLRAHVWPGVAIAPVLDGNAIVPRPQADGVRDTVKAWVSGLSAWELAGLERA 322

Query: 264 AAAAHSLVIA------------IGIFR-------GKLQIEEAIELIRLEEDLQVDKWGLV 304
             A  S+V A             G  R        +  +E+A     LE   Q   WG V
Sbjct: 323 VLAGKSVVAASRLVVEWSEDEPAGGLRPAREAAEDRFGVEQAAVATSLEVTWQTGHWGEV 382

Query: 305 EGGHDIDIADLRVQISSATVFL-GLSRR 331
           E  HD++  DLR Q  S  + + GL+RR
Sbjct: 383 EDTHDVEKEDLRRQFGSVVLLVSGLNRR 410


>gi|27380475|ref|NP_772004.1| hypothetical protein bll5364 [Bradyrhizobium japonicum USDA 110]
 gi|27353639|dbj|BAC50629.1| bll5364 [Bradyrhizobium japonicum USDA 110]
          Length = 264

 Score = 72.0 bits (175), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 99/210 (47%), Gaps = 8/210 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY++    EA+   G+ + LD R ++TPS R + +P+  LA A+ AE    Q + I P
Sbjct: 30  KRFYKEAGVAEAE--GGFAITLDGRPIRTPSGRQVVIPSRALADAVAAE-WAAQGETIDP 86

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MPL ++A + +E V      + + L K F  DL+F RA     L +    R+    DP
Sbjct: 87  VTMPLTRIANSVVEGVVDRVELVSDDLAKYFESDLLFYRAGHPEALVA----REATHWDP 142

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           +L W     G   ++       KQ D  ++     +   D + +AA+  +     S ++A
Sbjct: 143 VLFWAAETLGAHFILSEGIMHVKQPDEAVEAARAALPG-DAWSVAALHVVTTLTGSALLA 201

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWGL 303
           + +  G    ++      ++ED   D+WG+
Sbjct: 202 LALAHGVRGADQVWAAAHVDEDWNADQWGV 231


>gi|159478326|ref|XP_001697255.1| assembly factor 2 for F1 mitochondrial ATP synthase, splice variant
           b [Chlamydomonas reinhardtii]
 gi|158274729|gb|EDP00510.1| assembly factor 2 for F1 mitochondrial ATP synthase, splice variant
           b [Chlamydomonas reinhardtii]
          Length = 289

 Score = 72.0 bits (175), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 56/97 (57%), Gaps = 1/97 (1%)

Query: 95  RFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRPF 154
           RFY+      A+D +G+ VMLD + ++TP K+   LP+  LA A+ AEW++Q+    +  
Sbjct: 45  RFYKAAHVVPAEDRSGFQVMLDRKPVRTPGKKLAVLPSHPLALAVAAEWEWQEKGKPQLH 104

Query: 155 MMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFC 191
            MP+M L   AL++ P  R K+I H+M   + D   C
Sbjct: 105 TMPMMSLVAHALDQ-PRPRDKVIAHIMNYVHTDAACC 140


>gi|85373093|ref|YP_457155.1| chaperone [Erythrobacter litoralis HTCC2594]
 gi|84786176|gb|ABC62358.1| chaperone [Erythrobacter litoralis HTCC2594]
          Length = 232

 Score = 71.6 bits (174), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 92/209 (44%), Gaps = 7/209 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           K+F+++VS  + D   G+ V LD R ++T  KRP  + T  LA+ +  EW  Q  D I P
Sbjct: 2   KKFWKEVSVEQVD--GGYQVALDGRGIRTQGKRPQIVQTAALAELLADEWRAQGKD-IDP 58

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
              P   +A  A++R+      I   L+     D +  RA  D  L    ++RQ+   +P
Sbjct: 59  ASFPHRDMADYAIDRIATAADDIPAKLIGFMETDTLCYRADPDEPL----YKRQLDMWEP 114

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           L+   E     +    S      Q    +  +   +   D + LAA+ A  + + SL+I 
Sbjct: 115 LVTAFEMREDIRVERASGIIHKPQPPESLAKLRARIDALDPFTLAALFATTSLSASLIIG 174

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           +G        E   +    EED QV+ WG
Sbjct: 175 LGTLEADADSETLWDAANCEEDWQVELWG 203


>gi|326481290|gb|EGE05300.1| ATP12 chaperone protein [Trichophyton equinum CBS 127.97]
          Length = 339

 Score = 71.2 bits (173), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 116/278 (41%), Gaps = 41/278 (14%)

Query: 88  TGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLG--LAKAIGAEWDY 145
           T S + KRF++ V  +EA  G+   + LD R ++TP K+ L +P+    LA AI  EWD 
Sbjct: 59  TASPLRKRFWKDVHVKEAAGGH--QIYLDSRPVRTPEKKILTVPSSKPHLAHAIALEWDL 116

Query: 146 QQT--DGIRPFMMPLMKL-------ACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPAD 196
            +T     +  ++P+  +       A    + V   R +I   +++    D +   AP  
Sbjct: 117 LKTAQHATKYHLIPMTSITGRAEDIAAEDAKGVTTIRDEITRVMLRYLETDTLLSWAPEK 176

Query: 197 NDLTSG--------VHERQVQKIDPLLKWVESEFG----FKPVV-YSSFFGGKQEDGLIK 243
                G        + E+Q++   P++  + S        KP +  +S     Q    I 
Sbjct: 177 EPDYVGRSEEKRETLREKQIKAAQPIISSLVSTVWPGVELKPTLDANSIMPLPQPQQTID 236

Query: 244 TVENLMKKTDDYELAAIDAIAAAAHSLVIAIGI-------FRG--------KLQIEEAIE 288
            +   +     Y+LA ++    A  SL++   +       FR            IEEA  
Sbjct: 237 VIRGWLSSLSPYDLAGVERAGIATKSLLVGARVVIEWSENFRHLRPSGASRTFGIEEAAH 296

Query: 289 LIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFL 326
              LE   Q++ WG VE  HD++  DLR Q+ S  + +
Sbjct: 297 ASSLEVRWQIENWGEVEDTHDVEREDLRRQLGSVILLV 334


>gi|326476012|gb|EGE00022.1| mitochondrial molecular chaperone [Trichophyton tonsurans CBS
           112818]
          Length = 339

 Score = 71.2 bits (173), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 116/278 (41%), Gaps = 41/278 (14%)

Query: 88  TGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTL--GLAKAIGAEWDY 145
           T S + KRF++ V  +EA  G+   + LD R ++TP K+ L +P+    LA AI  EWD 
Sbjct: 59  TASPLRKRFWKDVHVKEAAGGHH--IYLDSRPVRTPEKKILTVPSSKPHLAHAIALEWDL 116

Query: 146 QQT--DGIRPFMMPLMKL-------ACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPAD 196
            +T     +  ++P+  +       A    + V   R +I   +++    D +   AP  
Sbjct: 117 LKTAQHATKYHLIPMTSITGRAEDIAAEDAKGVTTIRDEITRVMLRYLETDTLLSWAPEK 176

Query: 197 NDLTSG--------VHERQVQKIDPLLKWVESEFG----FKPVV-YSSFFGGKQEDGLIK 243
                G        + E+Q++   P++  + S        KP +  +S     Q    I 
Sbjct: 177 EPDYVGRSEEKRETLREKQIKAAQPIISSLVSTVWPGVELKPTLDANSIMPLPQPQQTID 236

Query: 244 TVENLMKKTDDYELAAIDAIAAAAHSLVIAIGI-------FRG--------KLQIEEAIE 288
            +   +     Y+LA ++    A  SL++   +       FR            IEEA  
Sbjct: 237 VIRGWLSSLSPYDLAGVERAGIATKSLLVGARVVIEWSENFRHLRPSGASRTFGIEEAAH 296

Query: 289 LIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFL 326
              LE   Q++ WG VE  HD++  DLR Q+ S  + +
Sbjct: 297 ASSLEVRWQIENWGEVEDTHDVEREDLRRQLGSVILLV 334


>gi|418056163|ref|ZP_12694216.1| ATP12 ATPase [Hyphomicrobium denitrificans 1NES1]
 gi|353209382|gb|EHB74785.1| ATP12 ATPase [Hyphomicrobium denitrificans 1NES1]
          Length = 266

 Score = 70.9 bits (172), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 8/211 (3%)

Query: 92  VGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGI 151
           + +RFY+  S     D   + ++LD R +KTP KR L +PT  LA+AI  EW  QQ + +
Sbjct: 37  LARRFYKGASV---SDVAPFQILLDGRAIKTPKKRALAVPTKALAEAIAEEWQAQQ-EFV 92

Query: 152 RPFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKI 211
            P  MPL + A TA++ V  T   +   ++     DLV  RA     L +     Q +  
Sbjct: 93  DPSRMPLTRFANTAIDAVSETEDAVAADIVAYAGSDLVCYRAETPEALVA----LQSRDW 148

Query: 212 DPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLV 271
           +P++ W ++  G K  V       +Q    +  V   +   D + L  +  +     S +
Sbjct: 149 NPVVAWADATLGAKFRVVPGIVHVQQPPAALAAVAEALTPHDAFRLTGLHVLTTLMGSAL 208

Query: 272 IAIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           +A+ + RG L  + A     ++ED ++  WG
Sbjct: 209 LALALARGALTSDAAWGAAHVDEDYEISLWG 239


>gi|298292188|ref|YP_003694127.1| ATP12 ATPase [Starkeya novella DSM 506]
 gi|296928699|gb|ADH89508.1| ATP12 ATPase [Starkeya novella DSM 506]
          Length = 256

 Score = 70.9 bits (172), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 104/211 (49%), Gaps = 11/211 (5%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+  +     +G  + + LD R ++TP +  + +P   LA+A+ AEW   Q + I P
Sbjct: 27  KRFYKAATVAPVGEGL-FRIELDGRPVRTPGRNLIAVPGEALAQALAAEWQ-AQGELIDP 84

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP+ +LA +AL+ V     ++   + +    DL+  RA +   L +     Q    DP
Sbjct: 85  MSMPMTRLANSALDGVASAMEEVAGEIARYAGSDLLCYRADSPEKLVA----LQGALWDP 140

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDD--YELAAIDAIAAAAHSLV 271
           LL W   EFG    V+    G +  D   +T+E +     D    LAA++ +   + S V
Sbjct: 141 LLDWAREEFG---AVFVLSEGVRFVDQPERTLEAIAGALPDEPLRLAALNLMTTLSGSAV 197

Query: 272 IAIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           IA+ + RG++  +EA      +E++Q + WG
Sbjct: 198 IALAVARGRITAQEAWRAAHADEEIQEELWG 228


>gi|393773263|ref|ZP_10361661.1| ATP12 ATPase [Novosphingobium sp. Rr 2-17]
 gi|392721143|gb|EIZ78610.1| ATP12 ATPase [Novosphingobium sp. Rr 2-17]
          Length = 230

 Score = 70.9 bits (172), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 94/209 (44%), Gaps = 7/209 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+ V+    DDG  W  +LD R +KTP  RP  +PT  LA+A+ AE    Q + I P
Sbjct: 2   KRFYKDVTVASIDDG--WRALLDGRGIKTPGGRPQVVPTKALAEALAAE-WAAQGEEIDP 58

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
                  L    ++ V      I+  L+     D +  RA  D  L    ++RQ++  +P
Sbjct: 59  GAFRYRDLTDFTIDAVAPDPATIVAELLPYAETDTLCYRADPDEAL----YKRQLEVWEP 114

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           LL  VE+  G +    S      Q +  +  +   +     + LAA+  +A  A SL IA
Sbjct: 115 LLAHVEARLGVQFTRVSGIVHKPQPEPTLAQLRTELTGRSPFALAALKVLANLAGSLTIA 174

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           +     K   E       LEED QV+ WG
Sbjct: 175 LEAIEPKADAEALWRAANLEEDWQVELWG 203


>gi|421604901|ref|ZP_16046935.1| hypothetical protein BCCGELA001_39452, partial [Bradyrhizobium sp.
           CCGE-LA001]
 gi|404262991|gb|EJZ28637.1| hypothetical protein BCCGELA001_39452, partial [Bradyrhizobium sp.
           CCGE-LA001]
          Length = 183

 Score = 70.9 bits (172), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 72/152 (47%), Gaps = 7/152 (4%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+      AD   G+ + LD + ++TPS R + +P+  LA A+ +EW   Q + I P
Sbjct: 30  KRFYKAAGV--ADAEGGFAITLDGKPIRTPSGRQVVIPSRELADAVASEW-AAQGESIDP 86

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MPL ++A + +E V      + + L K F  DL+F RA     L +    R+    DP
Sbjct: 87  VTMPLTRIANSVIEGVVDRVELVSDDLAKYFETDLLFYRAGHPEGLVA----REAAHWDP 142

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTV 245
           +L W     G   ++       KQ D  ++  
Sbjct: 143 VLFWAAQTLGAHFILSEGVMHVKQPDEAVRAA 174


>gi|329851363|ref|ZP_08266120.1| ATP12 chaperone family protein [Asticcacaulis biprosthecum C19]
 gi|328840209|gb|EGF89781.1| ATP12 chaperone family protein [Asticcacaulis biprosthecum C19]
          Length = 243

 Score = 70.9 bits (172), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 54/216 (25%), Positives = 95/216 (43%), Gaps = 24/216 (11%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEW-------DYQ 146
           KRF+++V+  E     G  + LD R +KTPS   L LP   LA  + AEW       DY 
Sbjct: 18  KRFWKEVTVTE-----GLGIALDGRPVKTPSGAHLVLPVHTLAHPVAAEWAAVGEHVDYD 72

Query: 147 QTDGIRPFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHER 206
                    MPL +L   A++R+P  + +I+  +++    DL+   +     L +    +
Sbjct: 73  --------AMPLTRLGFAAIDRMPDIQDEIVSEVLRYAETDLICYPSEYPESLIA----Q 120

Query: 207 QVQKIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAA 266
           + +  DP+L W   + G +     +     Q    ++ ++  ++    YE A + +    
Sbjct: 121 EAELWDPVLHWARQDLGLEFHQNLTLIHRPQPAQTLERLQAFVRGMTPYEQAGLMSATPL 180

Query: 267 AHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
             S+V+A+ ++ G L  E A     + E  Q   WG
Sbjct: 181 LGSVVLAMALWHGHLTGEAAFVASTVGETFQAGIWG 216


>gi|260428429|ref|ZP_05782408.1| ATP12 ATPase [Citreicella sp. SE45]
 gi|260422921|gb|EEX16172.1| ATP12 ATPase [Citreicella sp. SE45]
          Length = 237

 Score = 70.9 bits (172), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 96/217 (44%), Gaps = 7/217 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           +RFY + +  E + G G  + LD R + TP K PL +PT  LA+AI AE    Q + I P
Sbjct: 7   RRFYTEATVTETEGGYG--IALDGRRVMTPGKSPLVVPTRALAEAIAAE-WAAQGEKIAP 63

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP  + A +A+E+V   R  + + L +  + DL+  RA     L +     Q ++ DP
Sbjct: 64  ETMPFTRTANSAIEKVAPQRAAVADMLAEYGDSDLLCYRAVEPEPLVA----LQSERWDP 119

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           +L W     G      +      Q    ++ +       D + LAA   + A   SLV+ 
Sbjct: 120 MLAWAAEHLGAALEPRAGLMHAPQPAEALERLSVRTHTLDHFRLAAFHDLVALTGSLVLG 179

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDI 310
                     E    L RL+E  Q + WG+ E   ++
Sbjct: 180 FAATDPAQDPEALWALSRLDETWQEETWGIDEEAREM 216


>gi|296413918|ref|XP_002836653.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295630486|emb|CAZ80844.1| unnamed protein product [Tuber melanosporum]
          Length = 285

 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/262 (24%), Positives = 122/262 (46%), Gaps = 35/262 (13%)

Query: 93  GKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLG--LAKAIGAEWD--YQQT 148
           GK+ +++V   +   G+G+T++LD + ++TP K+ + +P     LA AI  EW   +   
Sbjct: 18  GKKLWKEVKVEKR--GDGFTILLDKQPIRTPLKKLIVVPESKPLLADAIALEWSLLHSSK 75

Query: 149 DGI-RPFMMPLMKLACTALE------RVPLTRPKIIEHLMKKFNQDLVFCRAPAD----- 196
           D + + + +PL +LA   ++      R P +R   I ++M+  + D +   AP+      
Sbjct: 76  DALTKRYRIPLTQLAARVIDMREPNARTP-SRDTTISNVMRYLHTDTLIFYAPSTLEEHR 134

Query: 197 NDLTSGVHERQVQKIDPLLKWVESEF--GFKPVVYSSFFG----GKQEDGLIKTVENLMK 250
           +     + E QV + +P+++W+ +    G K        G      Q    +K +   ++
Sbjct: 135 DPNKKTLRELQVAEAEPIVEWLTTVLWPGTKIEYNDGDLGFVVIAHQLPETVKAIREWLE 194

Query: 251 KTDDYELAAIDAIAAAAHSLVIA----------IGIFRGKLQIEEAIELIRLEEDLQVDK 300
              D++L A++    ++ S +I           +G+      IEEA     +E   Q + 
Sbjct: 195 GLTDWDLVALEIATMSSKSFLIGARLVAEWSSDVGVGEKSWGIEEAARAASVEVRYQTEI 254

Query: 301 WGLVEGGHDIDIADLRVQISSA 322
           WG VE  HD+D  D++ Q+ +A
Sbjct: 255 WGEVEDTHDVDKEDIKRQLGAA 276


>gi|326388338|ref|ZP_08209934.1| ATP12 ATPase [Novosphingobium nitrogenifigens DSM 19370]
 gi|326207070|gb|EGD57891.1| ATP12 ATPase [Novosphingobium nitrogenifigens DSM 19370]
          Length = 235

 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 91/209 (43%), Gaps = 7/209 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY   S     D +G+ V+LD R +KT   RP  LPT  L  A+ AEW   Q + I  
Sbjct: 2   KRFYRDASL--GRDEHGFRVLLDGRAVKTQGGRPQALPTSALGDALVAEW-ADQGEEIDT 58

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
                  +A  AL+ V     + I  L+   + D +  RA  D  L     ERQ    +P
Sbjct: 59  TRFAFRDMADHALDIVAADPAEAIAGLLPYADTDTLCYRAEPDEALG----ERQTIVWEP 114

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           ++   E  FG +    +           ++T+   ++  D + LAA+  + + A SL++ 
Sbjct: 115 IVATSEERFGVRFSRVAGVIHFPHPPETLQTLRAHLETLDPFTLAALVNLTSLAASLIVG 174

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           +        ++   +   LEED Q + WG
Sbjct: 175 LAAIEDGADLDALWDAASLEEDWQAELWG 203


>gi|295658336|ref|XP_002789729.1| ATP12 chaperone protein [Paracoccidioides sp. 'lutzii' Pb01]
 gi|226283032|gb|EEH38598.1| ATP12 chaperone protein [Paracoccidioides sp. 'lutzii' Pb01]
          Length = 440

 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 75/319 (23%), Positives = 132/319 (41%), Gaps = 59/319 (18%)

Query: 61  ESIYIKGRKQETASSSSSSVTMPMSFMTGSIVGKRFYEKVSTREADDGNGWTVMLDYRTL 120
           E I  + ++ E     + S     +  T  ++ +RF++ V  +E  DG+   V+LD R +
Sbjct: 123 ERIERRKKQSELMQQENISEVQQGTKTTLRLLKRRFWKDVHVKEVADGH--QVLLDSRPI 180

Query: 121 KTPSKRPLKLP--TLGLAKAIGAEWDY--QQTDGIRPFMMPLMKLACTALERVPLT---- 172
           +TP K+ + +P     LA AI  EWD        ++  ++PL  L   A + + L     
Sbjct: 181 RTPEKKIITIPPSKPHLAHAIALEWDLLVSSHQALKHHLIPLTALTARA-QDIALQDAAS 239

Query: 173 ----RPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDPLLKWVESEFGFK--- 225
               R +I++  M+  + D +   AP  N      H  +V +   +++  E++   +   
Sbjct: 240 QDTIRNEILKTTMRYLDTDTLLIWAPEKNIHDPDAHSEEVAESGQVVREGEAQESLRDIQ 299

Query: 226 -----PVVYSSFFGGK-----------QEDGLIKTVENLMKKT---------DDYELAAI 260
                P++  +F   K           + D ++ T +  + K            YELA +
Sbjct: 300 IKTAMPII--NFLTEKVWPGIEIKPSLEADSIMPTPQPQITKNVIRGWIYGLPAYELAGL 357

Query: 261 DAIAAAAHSLVIAIGIF--------------RGKLQIEEAIELIRLEEDLQVDKWGLVEG 306
           +    A+ SL++A                  R +  IE+A E   LE   Q  KWG VE 
Sbjct: 358 ERAVLASKSLLVAARFIVEWSEEFRHLQPEGRREFGIEKAAEASTLEVTWQTGKWGEVED 417

Query: 307 GHDIDIADLRVQISSATVF 325
            HD+D  D+R Q+ S  + 
Sbjct: 418 THDVDREDVRRQLGSVVLL 436


>gi|358393486|gb|EHK42887.1| hypothetical protein TRIATDRAFT_34313 [Trichoderma atroviride IMI
           206040]
          Length = 372

 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 73/278 (26%), Positives = 118/278 (42%), Gaps = 48/278 (17%)

Query: 93  GKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKR-----PLKLPTLGLAKAIGAEWDYQQ 147
            +RF+++V  RE D      V LD R L+ P  +     PL  P L  A A+  EWD   
Sbjct: 91  ARRFWKEVGVREID--GALQVYLDARPLRHPHTKEIIRVPLSKPNL--ASALAVEWDILT 146

Query: 148 T--DGIRPFMMPLMKLACTALE--------RVPLT---RPKIIEHLMKKFNQDLVFCRAP 194
           +     +  ++PL  L C AL+         +P +   R  I + +++  + D + C AP
Sbjct: 147 SPQQATKQHLIPLTGLVCRALDILDDDAAPSIPESAKIRHGIAQTVLRYLDTDSLLCWAP 206

Query: 195 A----DNDLTSGVHERQVQK------IDPLLKWVESEFGFKPVV-YSSFFGGKQEDGLIK 243
                D    +G   R VQK      +  L   V      +PV+   S    +Q +G+ +
Sbjct: 207 PAGPHDRRNDAGEDLRDVQKKAAQETVSFLTTHVWPGITIEPVLDGHSIMPKQQAEGVRE 266

Query: 244 TVENLMKKTDDYELAAIDAIAAAAHSLVIA-----------IGIFR----GKLQIEEAIE 288
            V+  +   D +E+A ++    A  SLV A           +G  R    G    E+A +
Sbjct: 267 VVQGWVMGLDAWEIAGLERAVLAGKSLVAAARVVAEWSEGPVGTGRVVRAGHFGAEDASK 326

Query: 289 LIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFL 326
              LE   Q ++WG VE  HD++  D+  Q+ S  + +
Sbjct: 327 ATGLEVAWQAEQWGEVEDTHDVNQEDVIRQLGSVVLLV 364


>gi|380094409|emb|CCC07788.1| unnamed protein product [Sordaria macrospora k-hell]
          Length = 455

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 75/279 (26%), Positives = 120/279 (43%), Gaps = 47/279 (16%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTP-SKRPLKLPTL--GLAKAIGAEWD--YQQT 148
           +RF++ V+    DD N   + LD R L+ P +K  ++LP     LA A+  EWD      
Sbjct: 165 RRFWKSVTVVTKDDMN--EIHLDSRALRRPDTKSIIRLPLTKPSLASALAIEWDQLVSAQ 222

Query: 149 DGIRPFMMPLMKLACTALERV-------PLTRPKIIEHLMKKFNQDLVFCRAP------- 194
              +  M+PL  L C AL+            R  I + L++  + D + C AP       
Sbjct: 223 QATKQHMIPLTSLICRALDIADEDAQGKTAIRDSIAKVLLRYLDTDSLLCWAPVPQHPED 282

Query: 195 ADNDLTSGVHERQVQKIDPLLKWVESEF----GFKPVV-YSSFFGGKQEDGLIKTVENLM 249
             ND    + E Q +    ++ ++ +         PV+  +S    +QE G  + V+  M
Sbjct: 283 GRNDAGYTLRELQEEAYSTVVSFLTTRVWPGVTIVPVLDETSIMPRQQEPGTREVVQGWM 342

Query: 250 KKTDDYELAAIDAIAAAAHSLVIAI---------------------GIFRGKLQIEEAIE 288
                +ELAA++  A A  SL++A                       + + +  IEEA  
Sbjct: 343 LGLSAWELAALERAALAGKSLLMAARLVVEWSGDGGNAVVQTPEEEALNKKRWGIEEAAT 402

Query: 289 LIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLG 327
            + LE D Q ++WG VE  HD++  DLR Q+ SA +   
Sbjct: 403 AVSLEVDWQTNQWGEVEDTHDVEKVDLRRQLGSAVLLCA 441


>gi|239788964|dbj|BAH71133.1| ACYPI001994 [Acyrthosiphon pisum]
          Length = 291

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/270 (26%), Positives = 119/270 (44%), Gaps = 26/270 (9%)

Query: 67  GRKQETASSSSSSVTMPMSFMTGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKR 126
            R Q        + T   SF   S    +FY+  S  E  D  G  V+LD   LKTP  +
Sbjct: 12  ARNQIQIKYKLHNFTKISSFSRRSYAINKFYKTTSIIENSDSYG--VLLDSSKLKTPLGK 69

Query: 127 PLKLPTLGLAKAIGAEWDYQQTDGIRPFMMPLMKLACTALER-VPLTRPKIIEHLMKKFN 185
            L +    LA A+  EW+ Q+ + I+   M L KL   A++    L+   +++ ++    
Sbjct: 70  ELIINNKALALAVAEEWEMQK-EHIKTDPMHLTKLCFLAVDNPSDLSEHDVVQQILSYLE 128

Query: 186 QDLVFCRAPADNDLTSGVHERQVQKIDPLLKWVESEF--GFKPVVYSSFFGGKQEDGLIK 243
            D VF  + ADN+L   + E+ +    PL++     F    KP        G   + L  
Sbjct: 129 TDTVFFISDADNELEKLLMEKWM----PLIQKFNGYFDTNLKPS------KGIYVESLDA 178

Query: 244 TVENLMKKTDDYELA-AIDAIAAAAH------SLVIAIGIFRGKLQIEEAIELIRLEEDL 296
             + L++K   Y L+    A+    H      SLV+        + +++A+ L ++EE+ 
Sbjct: 179 QTKALVEK---YFLSLGFPALHGVLHAVETLKSLVLTTCCLHQDISVKDAVLLFKMEEEY 235

Query: 297 QVDKWGLVEGGHDIDIADLRVQISSATVFL 326
           Q  KWG V+   D    D  +++S+A +F+
Sbjct: 236 QCTKWGRVDWIKDYIDNDSVIRLSAAMLFI 265


>gi|290990213|ref|XP_002677731.1| hypothetical protein NAEGRDRAFT_79592 [Naegleria gruberi]
 gi|284091340|gb|EFC44987.1| hypothetical protein NAEGRDRAFT_79592 [Naegleria gruberi]
          Length = 426

 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/269 (26%), Positives = 123/269 (45%), Gaps = 38/269 (14%)

Query: 92  VGKRFYEKV---STREADDGNGWTVML-DYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQ 147
           + K+FY KV    T+  ++   + V +   + L+T + + + +P+  +A     EW+ Q+
Sbjct: 149 LNKKFYRKVYIEETQTKENTPEFRVRIGQEQLLRTTTNKVVTVPSKEIAAVAAGEWELQE 208

Query: 148 TDGIRPFMMPLMKLACTALERVPLTRPKIIEHLMKK-----FNQDLVFCR-APADNDLTS 201
            + +RP  +P  +L C  +E V       + + MKK     F+ + V  R    D   T+
Sbjct: 209 -EYVRPATLPFTELLCR-IEDVKREIDFSVSYNMKKTIHGFFDGEFVCLRQGMGDEKFTN 266

Query: 202 GVHERQVQKIDPLLKWVESEFGFKPVVY---SSFFGG-KQEDGLIKTVEN--------LM 249
            + E      DPL++W   EF  + VV    SSF     QED  IK +E         L 
Sbjct: 267 SIKEH----WDPLVQWFNKEFNTELVVLGEDSSFADDPAQEDARIKFIERYTTSEGIRLF 322

Query: 250 KKTDDYE----------LAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVD 299
           KKT+  +          L  ++A+     S+VIA  ++ G++   +A    +L    Q +
Sbjct: 323 KKTESVKYLFDRMSPSGLVLLNAMVEVTGSVVIASALYAGRINARQAALATQLPVREQTN 382

Query: 300 KWGLVEGGHDIDIADLRVQISSATVFLGL 328
            +GLV G HD+  A+   ++S+  + L +
Sbjct: 383 TFGLVMGEHDLQFAEQFCKLSALELLLEI 411


>gi|302511597|ref|XP_003017750.1| hypothetical protein ARB_04633 [Arthroderma benhamiae CBS 112371]
 gi|291181321|gb|EFE37105.1| hypothetical protein ARB_04633 [Arthroderma benhamiae CBS 112371]
          Length = 339

 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 115/278 (41%), Gaps = 41/278 (14%)

Query: 88  TGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTL--GLAKAIGAEWDY 145
           T S + KRF++ V  +EA  G+   + LD R ++TP K+ L +P+    LA AI  EWD 
Sbjct: 59  TASPLRKRFWKDVHVKEAAGGH--QIYLDSRPVRTPEKKVLTVPSSKPHLAHAIALEWDL 116

Query: 146 QQT--DGIRPFMMPLMKL-------ACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPAD 196
            +T     +  ++P+  +       A    + V   R +I   +++    D +   AP  
Sbjct: 117 LKTAQHATKYHLIPMTSITGRAEDIAAEDAKGVTTIRDEITRVMLRYLETDTLLSWAPEK 176

Query: 197 NDLTSG--------VHERQVQKIDPLLKWVESEFG----FKPVV-YSSFFGGKQEDGLIK 243
                G        + E+Q++   P++  + S        KP +  +S     Q    I 
Sbjct: 177 EPDYVGRSEEKRETLREKQIKAAQPIISTLVSTVWPGVELKPTLDANSIMPLPQPRQTID 236

Query: 244 TVENLMKKTDDYELAAIDAIAAAAHSLVIAIGI-------FRG--------KLQIEEAIE 288
            +   +     Y+LA ++    A  SL++   +       FR            IEEA  
Sbjct: 237 VIRGWLSSLSPYDLAGVERAGIATKSLLVGARVVIEWSENFRHLRPSGASRTFGIEEAAH 296

Query: 289 LIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFL 326
              LE   Q + WG VE  HD++  DLR Q+ S  + +
Sbjct: 297 ASSLEVRWQTENWGEVEDTHDVEREDLRRQLGSVILLV 334


>gi|367465564|ref|YP_002517429.2| chaperone [Caulobacter crescentus NA1000]
 gi|350542129|gb|ACL95521.2| chaperone, ATP12 family protein [Caulobacter crescentus NA1000]
          Length = 188

 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 83/166 (50%), Gaps = 9/166 (5%)

Query: 139 IGAEWDYQQTDGIRPFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADND 198
           I AEW+  Q + I   +MP  +LA TA++R+  TR ++   +      D +  RA +   
Sbjct: 2   IAAEWE-AQVEYIDNSLMPATRLAFTAIDRIAETRAEVAREITAYAASDHLCYRAESPRV 60

Query: 199 LTSGVHERQVQKIDPLLKWVESEFG--FKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYE 256
           L     ERQ ++   +L W  +E G  F PV  +      Q    + +VE L+   DD+ 
Sbjct: 61  LV----ERQEREWGAVLDWARAEHGLVFTPV--AGIIHTPQPPETLASVEALVLTLDDFA 114

Query: 257 LAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           LA +   A    S V+ + +  G+L  ++A++L RL+E  Q ++WG
Sbjct: 115 LAGVAFAAGLFGSTVLGLAVRAGQLAGQQALDLSRLDEIYQAEQWG 160


>gi|115525544|ref|YP_782455.1| ATP12 ATPase [Rhodopseudomonas palustris BisA53]
 gi|115519491|gb|ABJ07475.1| ATP12 ATPase [Rhodopseudomonas palustris BisA53]
          Length = 259

 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 98/212 (46%), Gaps = 8/212 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+     E  DG  + + LD + ++TPSK+ L  P   LA+AI AEW   Q + I P
Sbjct: 30  KRFYKDAGFIETADG--FAITLDGKNVRTPSKQLLVAPNRVLAQAIAAEWQ-AQPELIDP 86

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MPL +LA + ++ V      + + +   F  DL F RA    +L +     + Q  DP
Sbjct: 87  SSMPLTRLANSVIDGVADRVIAVTDDIANYFQSDLTFYRASFPEELVA----LEAQHWDP 142

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           +L W         ++       +Q +  I      +   D + +AA+  + +   S ++A
Sbjct: 143 VLFWAAETLNAHFILAEGIVHVRQPEAAIAAARAALPN-DAWRVAALHIVTSITGSALLA 201

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWGLVE 305
           + ++  +L  ++      ++ED  +  WG+ E
Sbjct: 202 LALYARQLDADQVWAAAHVDEDWNISHWGVDE 233


>gi|327291936|ref|XP_003230676.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor
           2-like, partial [Anolis carolinensis]
          Length = 185

 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 75/157 (47%), Gaps = 4/157 (2%)

Query: 172 TRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDPLLKWVESEFGFKPVVYSS 231
           T+ +II   +K    D +  R      L     E Q  + DP+++W E  +       +S
Sbjct: 19  TKDQIIRAALKFLETDTICYRVEEPPALV----ELQKNEWDPIIEWAEKRYNVVIGSSTS 74

Query: 232 FFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIR 291
             G            + +   + + L  I+ +     SL++++G+    L +E A+ L R
Sbjct: 75  IMGPSIPQSTKDIFISHLASYNTWALQGIEYMITQLKSLILSMGLLDKHLTVEHAVLLSR 134

Query: 292 LEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGL 328
           LEE+ Q+ +WG VE  HD D+ ++R + ++AT+F+ L
Sbjct: 135 LEEEYQIQRWGNVEWAHDYDLHEMRSRTAAATLFVHL 171


>gi|302664719|ref|XP_003023986.1| hypothetical protein TRV_01848 [Trichophyton verrucosum HKI 0517]
 gi|291188011|gb|EFE43368.1| hypothetical protein TRV_01848 [Trichophyton verrucosum HKI 0517]
          Length = 339

 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 115/278 (41%), Gaps = 41/278 (14%)

Query: 88  TGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTL--GLAKAIGAEWDY 145
           T S + KRF++ V  +EA  G+   + LD R ++TP K+ L +P+    LA AI  EWD 
Sbjct: 59  TASPLRKRFWKDVHVKEAAGGH--QIYLDSRPVRTPEKKILTVPSSKPHLAHAIALEWDL 116

Query: 146 QQT--DGIRPFMMPLMKL-------ACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPAD 196
            +T     +  ++P+  +       A    + V   R +I   +++    D +   AP  
Sbjct: 117 LKTAQHATKYHLIPMTSITGRAEDIAAEDAKGVTTIRDEITRVMLRYLETDTLLSWAPEK 176

Query: 197 NDLTSG--------VHERQVQKIDPLLKWVESEFG----FKPVV-YSSFFGGKQEDGLIK 243
                G        + E+Q++   P++  + S        KP +  +S     Q    I 
Sbjct: 177 EPDYVGRSEEKRETLREKQIKAAQPIISTLVSTVWPGVELKPTLDANSIMPLPQPRQTID 236

Query: 244 TVENLMKKTDDYELAAIDAIAAAAHSLVIAIGI-------FRG--------KLQIEEAIE 288
            +   +     Y+LA ++    A  SL++   +       FR            IEEA  
Sbjct: 237 VIRGWLSSLSPYDLAGVERAGIATKSLLVGARVVIEWSENFRHLRPSGASRTFGIEEAAH 296

Query: 289 LIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFL 326
              LE   Q + WG VE  HD++  DLR Q+ S  + +
Sbjct: 297 ASSLEVRWQTENWGEVEDTHDVEREDLRRQLGSVILLV 334


>gi|254569954|ref|XP_002492087.1| Conserved protein required for assembly of subunits of
           mitochondrial F1F0 ATP synthase [Komagataella pastoris
           GS115]
 gi|238031884|emb|CAY69807.1| Conserved protein required for assembly of subunits of
           mitochondrial F1F0 ATP synthase [Komagataella pastoris
           GS115]
 gi|328351423|emb|CCA37822.1| Protein ATP12, mitochondrial [Komagataella pastoris CBS 7435]
          Length = 325

 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 66/267 (24%), Positives = 108/267 (40%), Gaps = 41/267 (15%)

Query: 96  FYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTL--GLAKAIGAEWDYQQTDGIRP 153
           F+EKV    A + +G+ V LD ++LKTP    L +P+    LA  +  EW       ++P
Sbjct: 52  FWEKVDV--AKEKDGFHVRLDGKSLKTPLGNQLVIPSAKKSLAYMVCNEWKNLSNLKVKP 109

Query: 154 FMMPLMKLACTALER---------VPLTRPKIIEH----LMKKFNQDLVFCRAPADNDLT 200
             +PL  L+  A++            LT+   IE     L++  + D V   +P + D  
Sbjct: 110 HSVPLTSLSTRAIDLGISHAVQDLEALTKLGNIEDIKTDLLRYLDTDTVLIFSPKE-DCD 168

Query: 201 SGVHERQVQKIDPLLKWVES-------------EFGFKPVVYSSFFGGKQEDGLIKTVEN 247
             +   Q +   PL+  +ES                F       F    Q +   +   N
Sbjct: 169 GKLRRAQEEMYRPLIASMESYLQQFAENSSEKITLNFLDSDTDGFRSNYQNEATKRAALN 228

Query: 248 LMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGK----------LQIEEAIELIRLEEDLQ 297
            M K + +EL A++     A S +  + I R            + +E       LE   Q
Sbjct: 229 WMNKLNVWELVALEKATLTAKSFLCGVAIVRANNKTLTDNEAPMDLESIARAASLEVIYQ 288

Query: 298 VDKWGLVEGGHDIDIADLRVQISSATV 324
            ++WG VE  HD+D  DLR  +++A +
Sbjct: 289 TERWGEVEDTHDVDKVDLRRNLAAAAL 315


>gi|254511420|ref|ZP_05123487.1| ATP12 ATPase [Rhodobacteraceae bacterium KLH11]
 gi|221535131|gb|EEE38119.1| ATP12 ATPase [Rhodobacteraceae bacterium KLH11]
          Length = 238

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 99/209 (47%), Gaps = 7/209 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRF+   +  E D G+  TV LD R +KTP+K  L LPT  +A+A+ AE    Q   + P
Sbjct: 10  KRFWTSSAVVETDGGH--TVELDGRRVKTPAKAALVLPTRAMAEAVAAE-WEAQEKEVDP 66

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP  + A  A+++V     ++   L    + DL+  RA     L +    RQ +  DP
Sbjct: 67  TTMPFTRSANAAIDKVRHQHREVANMLADYGDSDLLCYRATHPEALQA----RQAEAWDP 122

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
            L W +   G + +  +      Q    ++ +   ++    ++LAA   + + + SL++ 
Sbjct: 123 ALDWADEVLGARLIPLAGVVHQPQNTEALRVLRRQVQALTAFQLAAFHDLVSLSGSLILG 182

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
               +G    +E   + RL+E  Q+++WG
Sbjct: 183 FAAAKGWRNPDEIWRISRLDELWQIEQWG 211


>gi|226292772|gb|EEH48192.1| ATP12 chaperone protein [Paracoccidioides brasiliensis Pb18]
          Length = 308

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 76/296 (25%), Positives = 121/296 (40%), Gaps = 55/296 (18%)

Query: 88  TGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLP--TLGLAKAIGAEWDY 145
           T S++ +RF++ V  +E  DG+   V+LD   ++TP K+ + +P     LA AI  EWD 
Sbjct: 16  TISLLKRRFWKDVHVKEVADGH--QVLLDSFPVRTPEKKIITIPPSKPHLAHAIALEWDL 73

Query: 146 --QQTDGIRPFMMPLMKLACTALERVPLT--------RPKIIEHLMKKFNQDLVFCRAPA 195
                  ++  ++PL  L   A + V L         R +I++  M+  + D +   AP 
Sbjct: 74  LVSSHQALKHHLIPLTALTARA-QDVALQDAAGQDTIRNEILKTTMRYLDTDTLLTWAPE 132

Query: 196 DN------------DLTSGVHERQVQK-------------IDPLLKWVESEFGFKPVVYS 230
            N            +   GV E + Q+             I+ L + V      KP + +
Sbjct: 133 KNIHDPDTHGEEVAESRQGVREGEAQESLRDIQIKTAMPIINFLTEKVWPGIEIKPALEA 192

Query: 231 -SFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIF------------ 277
            S     Q       +   +     YELA ++    A+ SL++A                
Sbjct: 193 DSIIPTSQTQITKDVIRGWIYGLPAYELAGLERAVLASKSLLVAARFIVEWSEEFRNLQP 252

Query: 278 --RGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGLSRR 331
             R +  IE+A E   LE   Q  KWG VE  HD+D  D+R Q+ S  + +   RR
Sbjct: 253 EGRREFGIEKAAEASTLEVTWQTGKWGEVEDTHDVDREDVRRQLGSVVLLVSGERR 308


>gi|70982310|ref|XP_746683.1| mitochondrial molecular chaperone (Atp12) [Aspergillus fumigatus
           Af293]
 gi|66844307|gb|EAL84645.1| mitochondrial molecular chaperone (Atp12), putative [Aspergillus
           fumigatus Af293]
 gi|159123071|gb|EDP48191.1| ATP12 ATPase [Aspergillus fumigatus A1163]
          Length = 375

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/282 (24%), Positives = 121/282 (42%), Gaps = 42/282 (14%)

Query: 86  FMTGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLG--LAKAIGAEW 143
            + G +     Y K++     DG  + V+LD R ++TP+K  L +P+    LA AI  EW
Sbjct: 89  LLCGLLTSAPPYIKLTFSSCVDGE-YQVLLDTRPIRTPTKDILSIPSTKPHLAHAIALEW 147

Query: 144 DYQQT--DGIRPFMMPLMKLACTALERV-------PLTRPKIIEHLMKKFNQDLVFCRAP 194
           D   +    ++  ++PL  L   A +           TR +I++  M+  + D + C  P
Sbjct: 148 DVMTSARQALKNHLIPLTSLTARAGDIAQEDARGETTTRDQIVKLAMRYLDTDTLLCWVP 207

Query: 195 A-----------DNDLTSGVHERQVQKIDPLLKWVESEF----GFKPVVYS-SFFGGKQE 238
                       + +    + E Q++    ++ ++ ++        P++ + S     Q 
Sbjct: 208 ERRPYAGEESGENGERPESLREAQMRVAKDIIAFLGTKVWPGVDIVPILDADSILPVSQP 267

Query: 239 DGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGI-------FR-------GKLQIE 284
                 ++  +     ++LAA++    A+ SL++A+ +       FR        K  IE
Sbjct: 268 QATKDIIKQWVSSLQPHDLAALERGIVASKSLLVAVRLVVEWSENFRHLQRSGQKKFGIE 327

Query: 285 EAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFL 326
           EA E   LE   Q D WG VE  HD+D  DLR Q+ S  V +
Sbjct: 328 EAAEASSLEVRWQTDMWGEVEDTHDVDKEDLRRQLGSVIVVV 369


>gi|336275533|ref|XP_003352520.1| hypothetical protein SMAC_01354 [Sordaria macrospora k-hell]
          Length = 524

 Score = 68.9 bits (167), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 77/279 (27%), Positives = 119/279 (42%), Gaps = 51/279 (18%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKR-----PLKLPTLGLAKAIGAEWD--YQ 146
           +RF++ V+    DD N   + LD R L+ P  +     PL  P+L  A A+  EWD    
Sbjct: 234 RRFWKSVTVVTKDDMN--EIHLDSRALRRPDTKSIIRLPLTKPSL--ASALAIEWDQLVS 289

Query: 147 QTDGIRPFMMPLMKLACTALERV-------PLTRPKIIEHLMKKFNQDLVFCRAPA---- 195
                +  M+PL  L C AL+            R  I + L++  + D + C AP     
Sbjct: 290 AQQATKQHMIPLTSLICRALDIADEDAQGKTAIRDSIAKVLLRYLDTDSLLCWAPVPQHP 349

Query: 196 -DNDLTSGVHERQVQK------IDPLLKWVESEFGFKPVV-YSSFFGGKQEDGLIKTVEN 247
            D    +G   R++Q+      +  L   V       PV+  +S    +QE G  + V+ 
Sbjct: 350 EDGRNDAGYTLRELQEEAYSTVVSFLTTRVWPGVTIVPVLDETSIMPRQQEPGTREVVQG 409

Query: 248 LMKKTDDYELAAIDAIAAAAHSLVIAI---------------------GIFRGKLQIEEA 286
            M     +ELAA++  A A  SL++A                       + + +  IEEA
Sbjct: 410 WMLGLSAWELAALERAALAGKSLLMAARLVVEWSGDGGNAVVQTPEEEALNKKRWGIEEA 469

Query: 287 IELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVF 325
              + LE D Q ++WG VE  HD++  DLR Q+ SA + 
Sbjct: 470 ATAVSLEVDWQTNQWGEVEDTHDVEKVDLRRQLGSAVLL 508


>gi|193676456|ref|XP_001951568.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor
           2-like [Acyrthosiphon pisum]
          Length = 291

 Score = 68.9 bits (167), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 71/270 (26%), Positives = 119/270 (44%), Gaps = 26/270 (9%)

Query: 67  GRKQETASSSSSSVTMPMSFMTGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKR 126
            R Q        + T   SF   S    +FY+  S  E  D  G  V+LD   LKTP  +
Sbjct: 12  ARNQIQIKYKLHNFTKISSFSRRSYAINKFYKTTSIIENSDSYG--VLLDSSKLKTPLGK 69

Query: 127 PLKLPTLGLAKAIGAEWDYQQTDGIRPFMMPLMKLACTALER-VPLTRPKIIEHLMKKFN 185
            L +    LA A+  EW+ Q+ + I+   M L KL   A++    L+   +++ ++    
Sbjct: 70  ELIINNKALALAVAEEWEMQK-EHIKTDPMHLTKLCFLAVDNPSDLSEHDVVQQILSYLE 128

Query: 186 QDLVFCRAPADNDLTSGVHERQVQKIDPLLKWVESEF--GFKPVVYSSFFGGKQEDGLIK 243
            D VF  + ADN+L   + E+ +    PL++     F    KP        G   + L  
Sbjct: 129 TDTVFFISDADNELEKLLMEKWM----PLIQKFNGYFDTNLKPS------KGIYVESLDA 178

Query: 244 TVENLMKKTDDYELA-AIDAIAAAAH------SLVIAIGIFRGKLQIEEAIELIRLEEDL 296
             + L++K   Y L+    A+    H      SLV+        + +++A+ L ++EE+ 
Sbjct: 179 QTKALVEK---YFLSLGFPALHGVLHAVETLKSLVLTTCCLHQDISVKDAVLLSKMEEEY 235

Query: 297 QVDKWGLVEGGHDIDIADLRVQISSATVFL 326
           Q  KWG V+   D    D  +++S+A +F+
Sbjct: 236 QCTKWGRVDWIKDYIDNDSVIRLSAAMLFI 265


>gi|164658950|ref|XP_001730600.1| hypothetical protein MGL_2396 [Malassezia globosa CBS 7966]
 gi|159104496|gb|EDP43386.1| hypothetical protein MGL_2396 [Malassezia globosa CBS 7966]
          Length = 317

 Score = 68.6 bits (166), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 98/219 (44%), Gaps = 9/219 (4%)

Query: 107 DGNGWTVMLDYRTLKTPSKRPLKLPTLG--LAKAIGAEWDYQQTDGIRPFMMPLMKLACT 164
           D   + V LD R L+TP    L +P     LA  I  EWD +QT  ++P  +PL  L   
Sbjct: 75  DDEHFVVQLDRRNLRTPQGAKLAIPADRPLLACLIAQEWD-EQTKVVKPHSLPLTSLMSR 133

Query: 165 ALERV--PLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDPLLKWVESEF 222
           A++ +        + ++LM+ F+ D V         L     ER      PLL W+   F
Sbjct: 134 AIDALQDEQGHKDVQDYLMRYFDTDAVCFHDSEPARLVRLQEERWT----PLLDWMRRSF 189

Query: 223 GFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGKLQ 282
             +  V       +Q     + V  ++      +LA+++     + S++I + +    ++
Sbjct: 190 DIEVNVAKDSLVCQQSPETREKVARIVAGLQPLDLASLERAVMTSKSMIIGLALIHRHIE 249

Query: 283 IEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISS 321
            E+A     +E   QV  WG ++  HD+D A+LR Q++S
Sbjct: 250 AEQAALAAEVETASQVAAWGAIDDTHDVDHAELRRQLAS 288


>gi|384218114|ref|YP_005609280.1| hypothetical protein BJ6T_44230 [Bradyrhizobium japonicum USDA 6]
 gi|354957013|dbj|BAL09692.1| hypothetical protein BJ6T_44230 [Bradyrhizobium japonicum USDA 6]
          Length = 264

 Score = 68.6 bits (166), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 99/212 (46%), Gaps = 8/212 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY++    EA+   G+ + LD R ++TPS R + +P+  LA A+ AE    Q + I P
Sbjct: 30  KRFYKEAGVAEAE--GGFAITLDGRPIRTPSARQVVIPSRVLADAVAAE-WAAQGETIDP 86

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MPL ++A + +E V      + + L + F  DL+F RA     L +    R+    DP
Sbjct: 87  VTMPLTRIANSVVEGVIDRVELVADDLARYFETDLLFYRAGHPEGLVA----REATHWDP 142

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           +L W     G   ++       KQ D  ++     +   D + +AA+  +     S ++A
Sbjct: 143 VLFWAAEALGAHFILSEGIMHVKQPDEAVQAARAALPG-DAWSIAALHVVTTLTGSALLA 201

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWGLVE 305
           + +  G     +      ++ED   +KWG+ E
Sbjct: 202 LALAHGVRDAGQVWAAAHVDEDWNAEKWGVDE 233


>gi|268534540|ref|XP_002632401.1| Hypothetical protein CBG00425 [Caenorhabditis briggsae]
          Length = 269

 Score = 68.6 bits (166), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 69/266 (25%), Positives = 121/266 (45%), Gaps = 23/266 (8%)

Query: 74  SSSSSSVTMPMSFMTGSIVGKRFYEKVS-TREADDGNG---WTVMLDYRTLKTPSKRPLK 129
           S+ +S++T P          K+FY++V+   E D+  G     V+LD+  LKT   + LK
Sbjct: 14  SNQASALTKP----------KKFYKEVTLASEVDEKTGNQIHKVLLDHHVLKTQGGQVLK 63

Query: 130 LPTLGLAKAIGAEWDYQQTDGIRPFMMPLMKLACTALERVPLTRPK--IIEHLMKKFNQD 187
           L +  LA AI  EW   Q + ++   M L  LA T+ +  PL +    I + ++   + D
Sbjct: 64  LDSYPLALAIAQEWS-SQDEFLQLGQMRLTGLAFTSQDN-PLEQSADTISQKILDYVDGD 121

Query: 188 LVFCRAPADNDLTSGVHERQVQKIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIK-TVE 246
            V       N  +S +H  Q +   PL+K + S+ G +     S           K  ++
Sbjct: 122 TVLFF----NTESSKLHRYQEENWAPLIKNLNSDLGIQVRPSESILDCDVASETDKDKID 177

Query: 247 NLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEG 306
             +++ +   L  +     +  S +IA    R  +  E AI+   LE+  Q + WG VE 
Sbjct: 178 RWVRQHNFPALVGLQYATESVKSFIIAYNAIRHHIDPETAIDAATLEQRTQAETWGSVEW 237

Query: 307 GHDIDIADLRVQISSATVFLGLSRRN 332
            H ++  +L  ++S+A +F+  +  N
Sbjct: 238 AHGLEREELLSRLSAACLFVYFNSNN 263


>gi|374107938|gb|AEY96845.1| FAEL140Cp [Ashbya gossypii FDAG1]
          Length = 322

 Score = 68.6 bits (166), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 66/266 (24%), Positives = 111/266 (41%), Gaps = 39/266 (14%)

Query: 95  RFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLG--LAKAIGAEWDYQQTDGIR 152
           +F++KV    A +G   TV +D + ++TP   PL++      LA  +  EW    +  ++
Sbjct: 55  KFWDKVDL--AREGGHVTVHIDGKPVRTPLGSPLRVDERRGILAHMLREEWAGLTSLAVK 112

Query: 153 PFMMPLMKLA--CTALERV------PLT-------RPKIIEHLMKKFNQDLVFCRAPADN 197
           P+ +PL  L   C  LE V      P T       R  I + L++  + D + C +P  +
Sbjct: 113 PYSLPLTSLVSRCIDLETVSAPGCHPDTVAKVGGDRSAISQGLLRYLDTDTLLCFSP-RS 171

Query: 198 DLTSGVHERQVQKIDPLLKWVES---EFGFKPVVY-------SSFFGGKQEDGLIKTVEN 247
           +    + + Q +K  P++  VE+   E   KPV             G  Q +        
Sbjct: 172 EFEGALRKAQDEKYKPIIAGVETLLAEVSGKPVSLRCLDADVHGLRGNVQSEDTRAAAGK 231

Query: 248 LMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGK---------LQIEEAIELIRLEEDLQV 298
            M     ++ A  + +     S +  I + + K         L  EE      LE   QV
Sbjct: 232 YMDNLSVWDFAVFEKVVLTTKSFICGILLLQNKIGKAAPALKLSTEEIARAATLETIYQV 291

Query: 299 DKWGLVEGGHDIDIADLRVQISSATV 324
           ++WG VE  HD++  D+R  I++A V
Sbjct: 292 ERWGEVEDTHDVNHRDIRRNINAAAV 317


>gi|404254688|ref|ZP_10958656.1| ATP12 ATPase [Sphingomonas sp. PAMC 26621]
          Length = 230

 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 101/218 (46%), Gaps = 13/218 (5%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEW-DYQQTDGIR 152
           KRF+++V+  +A+ G    + LD R L+TP + PL LPT  LA+A+  EW   ++   I 
Sbjct: 2   KRFWKEVAV-DAERG----IRLDDRPLRTPGRVPLTLPTAALAEAVAEEWRSVEEGAEID 56

Query: 153 PFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKID 212
           P  MPL  L   A++RV          L +    DL+  RA +  DL +    RQ    D
Sbjct: 57  PRAMPLTGLGNAAIDRVGADPALFAAGLAQYGESDLLCYRADSPADLVA----RQAAAWD 112

Query: 213 PLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVI 272
           PLL W  + +     V +      Q    +  +   +   D + LAA+  +     SL+ 
Sbjct: 113 PLLDWARARYDVHIEVATGILHRAQPPLTLARLAEAIAARDAFTLAALSPVVTIGGSLIA 172

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWG---LVEGG 307
           A+ +       E+  + + L+E+ Q ++WG   L E G
Sbjct: 173 ALALAEQAATPEQVWDAVTLDEEYQAERWGRDPLAEAG 210


>gi|209884848|ref|YP_002288705.1| ATP12 ATPase [Oligotropha carboxidovorans OM5]
 gi|337741508|ref|YP_004633236.1| ATP12 ATPase [Oligotropha carboxidovorans OM5]
 gi|386030524|ref|YP_005951299.1| ATP12 ATPase family protein [Oligotropha carboxidovorans OM4]
 gi|209873044|gb|ACI92840.1| ATP12 ATPase [Oligotropha carboxidovorans OM5]
 gi|336095592|gb|AEI03418.1| ATP12 ATPase family protein [Oligotropha carboxidovorans OM4]
 gi|336099172|gb|AEI06995.1| ATP12 ATPase family protein [Oligotropha carboxidovorans OM5]
          Length = 258

 Score = 67.8 bits (164), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 93/209 (44%), Gaps = 8/209 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+  S  E  +G  + V LD + ++TP KR L  P   LA  + AEW  Q+ + I P
Sbjct: 30  KRFYQAASVDEMPEG--FAVTLDGKPVRTPGKRLLAAPVRTLADTMAAEWGAQK-EQIDP 86

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP+ +LA + ++ V      + +   +    DL+F RA     L +     Q +  DP
Sbjct: 87  MSMPMTRLANSVIDGVTENAVAVRDDAARYLGTDLLFYRASFPEQLIAN----QTEHWDP 142

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           +L+W     G   ++        Q    ++  +  + +T  + + A   + +   S ++A
Sbjct: 143 VLRWAADNLGAHFILGEGVMHVAQPARAVQAAQQALPET-PWPVGAFHIVTSITGSALLA 201

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           + +    L  +   +   ++ED    +WG
Sbjct: 202 LALQHKALTADAVWQAAHVDEDWNSRQWG 230


>gi|206598172|gb|ACI15978.1| hypothetical protein [Bodo saltans]
          Length = 382

 Score = 67.8 bits (164), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 123/277 (44%), Gaps = 20/277 (7%)

Query: 61  ESIYIKGRKQETASS----SSSSVTMPMSFMT-GSIVGKRFYEKVSTREADDGN--GW-T 112
           +++Y +   +E+A S      S   M +S  T  S   + F+  V+    D+    GW  
Sbjct: 87  DALYKQYEAEESAESRVLQEDSLYQMDVSLKTRASGAVRVFWTDVAVVPFDEQKYPGWFA 146

Query: 113 VMLDYRTLKT-PSKRPLKLPTLGLAKAIGAEWDYQQTDGIRPFMMPLMKLACTALERVPL 171
           V +D R +K   S+R L LP   LA A   E+  Q+   I   +MP+  L   A++  P 
Sbjct: 147 VAVDGRKVKAFESQRVLALPNEELALACAREYAAQKGH-INKLLMPITDLCSGAMQVAPQ 205

Query: 172 TRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDPLLKWVESEFGFK-PVVYS 230
                I++LM  +  D  + RA A       +  +Q + I P+  W    F    P V  
Sbjct: 206 AIQPRIDYLMTFYQNDNCYFRAAA-------IAAKQDEMITPITNWFSRVFDVDVPRVLG 258

Query: 231 SFFGGKQEDGLIKTVENLMK-KTDDYELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIEL 289
               G     + K  E L+    + Y++ A+  +A    S+++ + +F   + +  A  +
Sbjct: 259 IGHPGITPQSVEKVREALIALNMNPYQVVAMCVVAQFTSSIMLPLALFNRVVDLPTAFAI 318

Query: 290 IRLEEDLQVDKWGLVEGGHDIDIADLRVQI-SSATVF 325
            R EE   +   G++EG HDI  AD  V+I +SAT +
Sbjct: 319 NRAEEGHNIATAGMIEGYHDIREADSVVKICASATAW 355


>gi|346326534|gb|EGX96130.1| mitochondrial molecular chaperone [Cordyceps militaris CM01]
          Length = 376

 Score = 67.8 bits (164), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 112/287 (39%), Gaps = 62/287 (21%)

Query: 92  VGKRFYEKVSTREADDGNG-WTVMLDYRTLKTPSKR-----PLKLPTLGLAKAIGAEWDY 145
           + +RF+  V     D+ NG   V+LD R L+ P+ +     PL  PTL  A AI  EWD 
Sbjct: 93  IKRRFWRDV---RVDEVNGALQVLLDARPLRHPNTKEIVRVPLSKPTLAAALAI--EWDL 147

Query: 146 --QQTDGIRPFMMPLMKLAC------------TALERVPLTRPKIIEHLMKKFNQDLVFC 191
                   +  ++PL  L C                    TR  I   +++  + D + C
Sbjct: 148 LTSAQQATQQHLIPLTSLVCRALDIAAEDAAAATTGVAAATRTAIANSVLRYLDTDSLLC 207

Query: 192 RAP--ADNDLTSGVHE--RQVQKIDPLLKWVESEFGF-----------KPVVYS-SFFGG 235
            AP     DL +   E  R VQK     +  E   GF           KPV+   S F  
Sbjct: 208 WAPPAGARDLLNDAGESLRDVQK-----RAAEDTVGFLTTHVWPGITIKPVLDGHSIFPA 262

Query: 236 KQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIF----------------RG 279
            Q++G+ + V+  +     +ELA ++    A  SLV A                      
Sbjct: 263 SQDEGVREVVQGWVLGLSAWELAGLERAVLAGKSLVTAARFIAEWSDGPAGLRDAATRET 322

Query: 280 KLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFL 326
           +   EEA     LE D Q   WG VE  HD++  D+R Q+ S  + +
Sbjct: 323 RFGAEEAARATSLEVDWQTSNWGEVEDTHDVNREDVRRQLGSVVLLV 369


>gi|429861869|gb|ELA36533.1| ATP12 ATPase family protein [Colletotrichum gloeosporioides Nara
           gc5]
          Length = 300

 Score = 67.8 bits (164), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 73/277 (26%), Positives = 114/277 (41%), Gaps = 48/277 (17%)

Query: 96  FYEKVSTREADDGNGWTVMLDYRTLKTP-SKRPLKLP--TLGLAKAIGAEWDY--QQTDG 150
           F+  VS  E D      + LD R L+ P +K  ++LP     LA A+  EWD        
Sbjct: 30  FWNDVSVHEVD--GALQIHLDARPLRHPVTKAIVRLPPSKQHLASALAIEWDLLTSAQQA 87

Query: 151 IRPFMMPLMKLACTALERVP------LTRPKIIEHLMKKFNQDLVFCRAP----ADNDLT 200
            +  ++PL+ L C AL+           R +I   +M+  + D + C AP     D    
Sbjct: 88  TKQHLIPLISLVCRALDIAADDAGPAAIRQQIATTVMRYLDTDSLLCWAPPPGATDTRNE 147

Query: 201 SGVHERQVQKIDPLLKWVESEFGF-----------KPVV-YSSFFGGKQEDGLIKTVENL 248
           +G   R VQK     +  E+  GF            PV+   +     Q +G+ + V+  
Sbjct: 148 AGESLRDVQK-----RTAEAVVGFLTTHVWPGIEIGPVLDGDAIMPQPQAEGVREVVQGW 202

Query: 249 MKKTDDYELAAIDAIAAAAHSLVIAI--------GIFRGKLQ------IEEAIELIRLEE 294
           +   D +E+A ++    A  SL+ A         G   G++       +EEA     LE 
Sbjct: 203 VMGLDAWEIAGLERAVLAGKSLIGAARLVVEWSEGPNAGRVDGVERFGVEEAATASSLEV 262

Query: 295 DLQVDKWGLVEGGHDIDIADLRVQISSATVFLGLSRR 331
             Q   WG VE  HD++  DLR Q+ S  + +  + R
Sbjct: 263 SWQTGSWGEVEDTHDVEKEDLRRQLGSVVLLVSGTNR 299


>gi|410942983|ref|ZP_11374724.1| ATP synthase F1 mitochondrial assembly chaperone [Gluconobacter
           frateurii NBRC 101659]
          Length = 229

 Score = 67.8 bits (164), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 102/214 (47%), Gaps = 23/214 (10%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWD-YQQTDGIR 152
           KRF++ V+  E D   G    LD R ++ P    L +P+  L +A+ AEW      +   
Sbjct: 5   KRFWKSVTLGEQDGLFG--PELDGRPIRLPKGTVLAVPSRSLGQALVAEWSRIPDNEAFT 62

Query: 153 PFMMPLMKLACTALERVPLTRPKIIEH----LMKKFNQDLVFCRAPADNDLTSGVHERQV 208
           P  +PL ++A T +ER+   RP ++E     L +  +  L + +   D+           
Sbjct: 63  PEQLPLTRIAGTMIERI---RPDLVEARETLLRRGLDDGLCYRKEKPDS----------- 108

Query: 209 QKIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAH 268
             ++ +L+W+  E G +P+V        Q    I  +E L+ + ++ ELAA+  +  +  
Sbjct: 109 -TVERVLEWLAKE-GIRPIVTDGLMPITQSGDYITGLERLLAQQNEAELAALGVLTQSFG 166

Query: 269 SLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           SL++A+ +  G +  E AI +   +E  Q++ WG
Sbjct: 167 SLLLALALVSGTISREAAISVANADERRQLEVWG 200


>gi|332187783|ref|ZP_08389517.1| ATP12 chaperone family protein [Sphingomonas sp. S17]
 gi|332012133|gb|EGI54204.1| ATP12 chaperone family protein [Sphingomonas sp. S17]
          Length = 229

 Score = 67.8 bits (164), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 92/209 (44%), Gaps = 10/209 (4%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRF+ +V+     D     V LD R ++TP + PL LPT  LA+A+  EW     + + P
Sbjct: 2   KRFWSEVTV----DAER-VVRLDDRPVRTPGRTPLALPTPALAEAVAEEW-RSVGETVDP 55

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MPL  LA  A++R+          L +    DL+  RA +  +L +    RQ    +P
Sbjct: 56  RAMPLTGLANAAIDRIAADPVPFATGLARYAESDLLCYRADSPPELVA----RQDAVWNP 111

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           LL W    +     + +      Q    ++ +   +   D + LAA+  +     SLV+A
Sbjct: 112 LLDWARDRYDVHFALVTGIMHRPQPKATVERLSAAVAALDPFRLAALSPVVTITGSLVLA 171

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           + +  G            ++ED Q ++WG
Sbjct: 172 LALLEGAADTNAIWTAAHVDEDFQAEQWG 200


>gi|156847017|ref|XP_001646394.1| hypothetical protein Kpol_2001p41 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156117070|gb|EDO18536.1| hypothetical protein Kpol_2001p41 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 342

 Score = 67.8 bits (164), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 74/351 (21%), Positives = 139/351 (39%), Gaps = 60/351 (17%)

Query: 3   ASLIPKTLQSIRNPNAISSFTTFRTRHLCSVATVHQSPQYDDDPTSS-FTFSSPSDKINE 61
           +S++ +  +S+ N N +      R  H+ S+     +   +D  T+  F   +       
Sbjct: 2   SSMLGRYSKSVYNFNKLKVVWKVRNYHVSSIVLKSAATATNDTGTAQPFGIDTT------ 55

Query: 62  SIYIKGRKQETASSSSSSVTMPMSFMTGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLK 121
              I+  K+   +  S ++T             +F++KVS    +    + + LD +T+ 
Sbjct: 56  ---IENNKKTETNRLSKTLT-------------KFWDKVSYHYDETSGKYLIQLDSKTIN 99

Query: 122 TPSKRPLKLPTLG--LAKAIGAEWDYQQTDGIRPFMMPLMKLA--CTALERVPLT----- 172
           TP    L +      LA  +  EW       I+ + +PL  L   C  LE V        
Sbjct: 100 TPMGNLLAVDKNKKMLALMLSNEWKNLPNLSIKKYSLPLTSLTSRCIDLEAVNKNGNLDD 159

Query: 173 -------RPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDPLLKWVE---SEF 222
                  R KII  L++  + D +   +PA ++    + + Q +   P++  +E   +EF
Sbjct: 160 IVKFNGDRNKIINDLLRYLDTDTLLVFSPA-SEFEGALRKEQNKLYLPVIDSIENFLTEF 218

Query: 223 GFKPVVYS-------SFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIG 275
              P+  +          G +Q+    +  +  ++    ++LA  + I     S +  I 
Sbjct: 219 ANDPIKLNILDADIHGLRGNQQDLNTKEAAKKYLESLSYWDLAIFEKIVLTTKSFICGIL 278

Query: 276 IFRGK----------LQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLR 316
           + +GK            +E+ +    LE   QVD+WG VE  HD+D  D+R
Sbjct: 279 LLQGKSNSVNKLALEYNVEDIVRYATLETIHQVDRWGEVEDTHDVDKRDIR 329


>gi|157867775|ref|XP_001682441.1| conserved hypothetical protein [Leishmania major strain Friedlin]
 gi|68125895|emb|CAJ03538.1| conserved hypothetical protein [Leishmania major strain Friedlin]
          Length = 304

 Score = 67.4 bits (163), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 71/280 (25%), Positives = 117/280 (41%), Gaps = 30/280 (10%)

Query: 61  ESIYIKGRKQETASS----SSSSVTMPMSFMTGSIVGKR-FYEKVSTREADDGN-GW-TV 113
           E +  K  +QE  SS      S   M +S    S    R F++ V   E +D   GW  V
Sbjct: 10  EEVMRKFEEQENESSRVLSEDSLYQMEVSLKPRSSCAVRVFWKDVDVVELEDRYPGWFAV 69

Query: 114 MLDYRTLKT-PSKRPLKLPTLGLAKAIGAEWDYQQTDGIRPFMMPLMKLACTALERVPLT 172
            +D R +K   S + L +P+  +A     E+  +QT  I   +MP+  +   AL   P  
Sbjct: 70  TVDGRKVKAMKSSQVLAVPSEAMACCCAQEYA-EQTGHINQLLMPMSDICSGALHIAPQM 128

Query: 173 RPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDPLLKWVESEF--------GF 224
               I++L+  F  D ++ RA       + +  +Q   I P++ W E  +        G 
Sbjct: 129 LTPRIDYLLSFFQNDNLYFRA-------APIAAKQDAMIAPIIAWFERVYEMDVPRVVGI 181

Query: 225 KPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGKLQIE 284
                +     K  D LI          + Y++ A+   A    SL++ + +F G + + 
Sbjct: 182 GNPHITPHATAKMRDALIAM------NMNPYQVLAMCVTAQFTSSLLLPLALFSGVVDLP 235

Query: 285 EAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATV 324
            A+ + R EE   + + GLV G HDI  AD   +I +  +
Sbjct: 236 TALAINRAEEQHSISEAGLVAGYHDIREADAVTKICACAL 275


>gi|357384681|ref|YP_004899405.1| hypothetical protein [Pelagibacterium halotolerans B2]
 gi|351593318|gb|AEQ51655.1| hypothetical protein KKY_1639 [Pelagibacterium halotolerans B2]
          Length = 257

 Score = 67.4 bits (163), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 100/211 (47%), Gaps = 11/211 (5%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+ V   E D    +TV+LD R  KTP+ + + +    LA  +  EWD  Q + I P
Sbjct: 29  KRFYKSVDVAETD--GVFTVLLDGRVTKTPTGKQVGVGHAELAARMREEWD-AQGELIDP 85

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
            MMP +KL  +A+E    +R  +++ ++K    DL+  RA +  +L     E+Q Q  D 
Sbjct: 86  DMMPHVKLINSAVEGGEESRGALLDEVVKYAGNDLLLYRADSPRELV----EKQEQIWDD 141

Query: 214 LLKWVESEF--GFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLV 271
           +L  +   F   F+P V        Q   ++K + + ++        A+ ++     S +
Sbjct: 142 VLVRIARHFSVSFQPTV--GIVHKAQSVDMLKKLRDAIEPLHHVPATAMVSVTGLTGSGL 199

Query: 272 IAIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           +AI +    +  + A     ++ED Q+  WG
Sbjct: 200 LAIALRERLVDADAAWIAAHVDEDYQISLWG 230


>gi|270007362|gb|EFA03810.1| hypothetical protein TcasGA2_TC013923 [Tribolium castaneum]
          Length = 279

 Score = 67.4 bits (163), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 65/269 (24%), Positives = 116/269 (43%), Gaps = 20/269 (7%)

Query: 64  YIKGRKQETASSSSSSVTMPMSFMTGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTP 123
           Y+K     T +++S ++    + +      KRFY       ++    + V LD R LKTP
Sbjct: 8   YLKFSANCTLNNNSKALGHFNNSIRRYATRKRFYRNTGILRSE--GKYEVTLDQRKLKTP 65

Query: 124 SKRPLKLPTLGLAKAIGAEWDYQQTDGIRPFMMPLMKLACTALER-VPLTRPKIIEHLMK 182
                 + +  LA A+  EWD Q+ + I+   M L  L  T ++    LT+  +++++  
Sbjct: 66  KGNLFSVESEPLAIAVATEWDSQKENIIQS-KMHLTTLCNTVIDNPNNLTKYDMVDYITN 124

Query: 183 KFNQDLVFCRAPADNDLTSGVHERQVQKIDPLLKWVESEFGFKPVVYSSFFGGKQEDG-- 240
             + D +  +A    +    + E Q ++ DP++ W    F        S    +Q D   
Sbjct: 125 YLDTDTILFQA----NEEEDLLELQEKEWDPIIDWFNKRFDV------SIKKSQQMDAPP 174

Query: 241 -LIKTVENLMKKTDDYELAAIDAIAAAAHSL---VIAIGIFRGKLQIEEAIELIRLEEDL 296
              K    L K    +  A I        +L   ++ +      L  E+A+ L RLEE+ 
Sbjct: 175 ASEKDKATLSKHLLSHNFATICGFVYGVDTLKSVILTLACVEHFLTPEKAVLLSRLEEEY 234

Query: 297 QVDKWGLVEGGHDIDIADLRVQISSATVF 325
           Q   WG VE  HD++  DL+ ++++  +F
Sbjct: 235 QTGHWGRVEWAHDLNQQDLQARLAAVILF 263


>gi|156056344|ref|XP_001594096.1| hypothetical protein SS1G_05525 [Sclerotinia sclerotiorum 1980]
 gi|154703308|gb|EDO03047.1| hypothetical protein SS1G_05525 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 375

 Score = 67.4 bits (163), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 65/284 (22%), Positives = 119/284 (41%), Gaps = 43/284 (15%)

Query: 89  GSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLP--TLGLAKAIGAEWDY- 145
           G+   KRF++ V+ +  ++G    + LD R L+ PSK  L +P     LA AI  EWD  
Sbjct: 94  GTAKMKRFWKDVNIQHTEEG--LQIFLDKRALRRPSKEILTIPHHKPHLASAIALEWDLL 151

Query: 146 -QQTDGIRPFMMPLMKLACTALERVP-------LTRPKIIEHLMKKFNQDLVFCRAP--- 194
                 ++  ++P+  L   AL+ +          R  I+  +M+  + D + C AP   
Sbjct: 152 VSAQQALKTHLIPMTSLVNRALDIIDEEKEGRNTIRDNIVTTVMRYLDTDSLLCWAPEAP 211

Query: 195 -------ADNDLTSGVHERQVQKIDPLLKWVESEFG----FKPVVYSSFFGGKQEDGLIK 243
                  +  D    +   Q +  +P+++++  +        PV+ +     K +  + K
Sbjct: 212 EDPPGYESHVDRVESLRSIQRKSAEPIIQFLSEKVWPGVELIPVLDADSIVPKSQPQMTK 271

Query: 244 -TVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIF---------------RGKLQIEEAI 287
             +   +     +ELA ++    A   L+ A  +                +    +EEA 
Sbjct: 272 DIIRGWVSGLPPFELAGLERGVLAGKGLLGAARLVVEWSTEFTNLRDDTAKKTFGVEEAA 331

Query: 288 ELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGLSRR 331
           +L  LE D Q+  WG VE  HD++  D+R Q+ S  + +   R+
Sbjct: 332 KLASLEVDWQIGMWGAVEDTHDVEREDIRRQLGSVVLLVSGQRK 375


>gi|148261664|ref|YP_001235791.1| ATP12 ATPase [Acidiphilium cryptum JF-5]
 gi|326405156|ref|YP_004285238.1| ATP12 family protein [Acidiphilium multivorum AIU301]
 gi|146403345|gb|ABQ31872.1| ATP12 ATPase [Acidiphilium cryptum JF-5]
 gi|325052018|dbj|BAJ82356.1| ATP12 family protein [Acidiphilium multivorum AIU301]
          Length = 233

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 106/238 (44%), Gaps = 8/238 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTD-GIR 152
           KR +  V+ +  + G G  + LD R ++ P   PL +P   LA+AI AEWD    D  IR
Sbjct: 2   KRIWSAVAVQALETGFG--ITLDGRPVRLPGGAPLAVPAEALARAIAAEWDAPDKDQDIR 59

Query: 153 PFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKID 212
           P  +PL +LA TA+ER+      +   L+     DL+  RA   + L +     Q +   
Sbjct: 60  PDDLPLTRLAGTAVERIAPDTAPVRAGLLAYGRSDLLCYRATGPDGLVA----EQARLWQ 115

Query: 213 PLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVI 272
           P L W  +  G +  V +      Q    I  ++  +   D + LA +     A  SLV+
Sbjct: 116 PWLDWAGATLGARLAVTAGITAIDQPPEAIAGLDAALATHDAWSLAGLGVTVPALGSLVL 175

Query: 273 AIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGLSR 330
            + +  G +    A +   L+E  Q   WG  +       A +  +I+SA  F+ L+R
Sbjct: 176 GLAVAAGAIAPAAAHDCATLDERWQERLWG-EDAEAAARRARIGGEIASAARFVNLAR 232


>gi|389646655|ref|XP_003720959.1| ATP12 chaperone [Magnaporthe oryzae 70-15]
 gi|86196490|gb|EAQ71128.1| hypothetical protein MGCH7_ch7g535 [Magnaporthe oryzae 70-15]
 gi|351638351|gb|EHA46216.1| ATP12 chaperone [Magnaporthe oryzae 70-15]
 gi|440472214|gb|ELQ41090.1| ATP12 chaperone protein [Magnaporthe oryzae Y34]
 gi|440482176|gb|ELQ62691.1| ATP12 chaperone protein [Magnaporthe oryzae P131]
          Length = 365

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 70/295 (23%), Positives = 124/295 (42%), Gaps = 41/295 (13%)

Query: 68  RKQETASSSSSSVTMPMSFMTGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKR- 126
           R QE  S   S+ +   +    S + +RF+     RE D    + V LD R L+ P+ + 
Sbjct: 74  RAQELRSGEKSN-SGSGAAARASGLKRRFWRDCHVREVD--GAYEVHLDTRGLRHPTTKE 130

Query: 127 ----PLKLPTLGLAKAIGAEWDYQQT--DGIRPFMMPLMKLACTALERVPLT------RP 174
               PL  P L  A A+  EWD  ++     +  ++PL  L C A++           R 
Sbjct: 131 IVRIPLSKPQLAYALAV--EWDQLESAQQATKQHLIPLTSLVCRAIDLAADDAAGGSIRT 188

Query: 175 KIIEHLMKKFNQDLVFCRAPADNDLTS-GVHERQVQK--IDPLLKWVESEFGFKPVVYSS 231
            II+ +++  + D + C APA  D  + G   RQ Q+    P++  ++++      +  +
Sbjct: 189 SIIDTVLRYLDTDTLLCWAPAGGDEAADGRTLRQAQEEAARPIIAHLQTKVWPGVTIEPA 248

Query: 232 FFGGK-----QEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGI---FRGKLQ- 282
              G      Q  G+   +   +     ++LA ++    A   L+ A  +   +   LQ 
Sbjct: 249 LDDGGLLPKPQAPGVRDVIRGWLMGLSSWDLAGVERATLAGKGLLAATRLVCEWSPALQP 308

Query: 283 -----------IEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFL 326
                      +EEA + + +E + Q   WG VE  HD++  D+R Q  S  + +
Sbjct: 309 ADGGEEAPAFGVEEAAQAVSVEVNWQTKVWGEVEDTHDVEKEDVRRQFGSVVLLV 363


>gi|304319747|ref|YP_003853390.1| hypothetical protein PB2503_00842 [Parvularcula bermudensis
           HTCC2503]
 gi|303298650|gb|ADM08249.1| hypothetical protein PB2503_00842 [Parvularcula bermudensis
           HTCC2503]
          Length = 234

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 88/210 (41%), Gaps = 8/210 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFYE V T  A+DG  + + LD R  KTP +  L   +  LA+A+ AEW  QQ D I  
Sbjct: 7   KRFYETV-TVAAEDGV-YVIKLDGRPAKTPGRHLLGAESQILAEALAAEWS-QQQDIIDL 63

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MPL +L   A +     R    + ++     DL+  RAP      +G+  RQ +  DP
Sbjct: 64  TTMPLTRLTGFARDGGEDARGPWRQTILAYAGSDLLCYRAP-----ETGLAARQAEIWDP 118

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
            L       G    V       +Q+   +  +E  +       L A   +     S V+A
Sbjct: 119 FLARFAERVGAPLTVTEGIIAVEQDPKSLAAIEAYLDPYSLERLYAAKLLTEMTGSAVLA 178

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWGL 303
           +          E     RL+E  Q ++WG+
Sbjct: 179 LAALDEDAPAHEIFAASRLDETFQAERWGI 208


>gi|401419118|ref|XP_003874049.1| conserved hypothetical protein [Leishmania mexicana
           MHOM/GT/2001/U1103]
 gi|322490283|emb|CBZ25543.1| conserved hypothetical protein [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 304

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 105/242 (43%), Gaps = 25/242 (10%)

Query: 94  KRFYEKVSTREADDGN-GW-TVMLDYRTLKT-PSKRPLKLPTLGLAKAIGAEWDYQQTDG 150
           + F++ V   E  D   GW  V +D R +K   S + L +P+  +A     E+  +QT  
Sbjct: 48  RVFWKDVDVVELKDRYPGWFAVTVDGRKVKAMKSSQVLAVPSEAMACCCAQEYA-EQTGY 106

Query: 151 IRPFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQK 210
           I   +MP+  +   AL   P      I++L+  F  D ++ RAP        +   Q   
Sbjct: 107 INQLLMPMSDICSGALHIAPQMLTPRIDYLLSFFQSDNLYFRAPP-------IAATQDAM 159

Query: 211 IDPLLKWVESEFGFK-PVVY-------SSFFGGKQEDGLIKTVENLMKKTDDYELAAIDA 262
           I P++ W E  +  + P V        +     K  D LI    N       Y++ A+  
Sbjct: 160 IAPIIAWFERVYEMEVPRVVGIGDPHITPHATAKMRDALIAMNMN------PYQVLALCV 213

Query: 263 IAAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSA 322
            A    SL++ + +F G + +  A+ + R EE   + + GLV G HDI  AD+  +I + 
Sbjct: 214 TAQFTSSLLLPLALFSGVVDLPTALAINRAEEQHSISEAGLVAGYHDIREADVVTKICAC 273

Query: 323 TV 324
            +
Sbjct: 274 AM 275


>gi|330993255|ref|ZP_08317191.1| ATP synthase [Gluconacetobacter sp. SXCC-1]
 gi|329759657|gb|EGG76165.1| ATP synthase [Gluconacetobacter sp. SXCC-1]
          Length = 254

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 97/212 (45%), Gaps = 8/212 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEW---DYQQTDG 150
           KRF+ +        G G+ V LD R ++ P    L + +  LA AI AEW     ++   
Sbjct: 18  KRFWTQARVTPVA-GGGFGVELDGRGIRLPGGTALVVHSAALADAIAAEWARAGGEKGGN 76

Query: 151 IRPFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQK 210
             P  + + ++A T +ERV       +  L++  + +L+  RA    D  + +  RQ ++
Sbjct: 77  FTPDDLSMTRIAGTMIERVAPDPAAQVTALLQYVDGELLCYRA----DYPAQLRTRQHEQ 132

Query: 211 IDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSL 270
            DP L W+ +  G    V +      Q  G+      ++   D+  LAA+  +  A  S+
Sbjct: 133 WDPQLAWLRARHGIDMAVTTGVMPLVQPAGVHAAWRAIVDAQDNATLAALGVMVPAVKSI 192

Query: 271 VIAIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           V+ + +  G L   +A E+  ++E  Q+D WG
Sbjct: 193 VLGLAVVTGALSAAKAAEIATVDERTQMDIWG 224


>gi|189237014|ref|XP_967508.2| PREDICTED: similar to lethal (2) k14505 CG8674-PA [Tribolium
           castaneum]
          Length = 247

 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/239 (25%), Positives = 104/239 (43%), Gaps = 20/239 (8%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY       ++    + V LD R LKTP      + +  LA A+  EWD Q+ + I+ 
Sbjct: 6   KRFYRNTGILRSE--GKYEVTLDQRKLKTPKGNLFSVESEPLAIAVATEWDSQKENIIQS 63

Query: 154 FMMPLMKLACTALER-VPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKID 212
             M L  L  T ++    LT+  +++++    + D +  +A    +    + E Q ++ D
Sbjct: 64  -KMHLTTLCNTVIDNPNNLTKYDMVDYITNYLDTDTILFQA----NEEEDLLELQEKEWD 118

Query: 213 PLLKWVESEFGFKPVVYSSFFGGKQEDG---LIKTVENLMKKTDDYELAAIDAIAAAAHS 269
           P++ W    F        S    +Q D      K    L K    +  A I        +
Sbjct: 119 PIIDWFNKRFDV------SIKKSQQMDAPPASEKDKATLSKHLLSHNFATICGFVYGVDT 172

Query: 270 L---VIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVF 325
           L   ++ +      L  E+A+ L RLEE+ Q   WG VE  HD++  DL+ ++++  +F
Sbjct: 173 LKSVILTLACVEHFLTPEKAVLLSRLEEEYQTGHWGRVEWAHDLNQQDLQARLAAVILF 231


>gi|380474864|emb|CCF45551.1| ATP12 ATPase [Colletotrichum higginsianum]
          Length = 242

 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 94/233 (40%), Gaps = 35/233 (15%)

Query: 135 LAKAIGAEWDY--QQTDGIRPFMMPLMKLACTALE------RVPLTRPKIIEHLMKKFNQ 186
           LA A+  EWD         +  M+PL  L C AL+           R  I   LM+  + 
Sbjct: 10  LASALAIEWDMITSAQQATKQHMIPLTSLTCRALDIAEDDAAAGAIRETIATTLMRYLDT 69

Query: 187 DLVFCRAPADNDLT----SGVHERQVQK------IDPLLKWVESEFGFKPVV-YSSFFGG 235
           D + C AP    +     +G   R VQK      +  L+  V      +PV+  +S    
Sbjct: 70  DSLLCWAPPAGPMDVPNDAGESLRDVQKRTTEEVVGFLMARVWPGIEIRPVLDENSIMPI 129

Query: 236 KQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAI-----------GIFRG----- 279
            Q +G+ + V+  +   D +ELA ++    A  SL+ A+           G  R      
Sbjct: 130 AQAEGVREVVQGWIMGLDAWELAGLERAVLAGKSLITAVRLVVEWSEGPVGDHREAKSPR 189

Query: 280 KLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGLSRRN 332
           K  IEEA     LE   Q   WG VE  HD++  DLR Q+ S  + +  + R 
Sbjct: 190 KFGIEEAATAASLEVSWQTGSWGEVEDTHDVEKEDLRRQLGSVVLLVSGTNRK 242


>gi|347758847|ref|YP_004866409.1| ATP12 chaperone family protein [Micavibrio aeruginosavorus ARL-13]
 gi|347591365|gb|AEP10407.1| ATP12 chaperone family protein [Micavibrio aeruginosavorus ARL-13]
          Length = 237

 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 84/188 (44%), Gaps = 6/188 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY K+ T +A+   G+++ LD + +KTPS + +  P   LA  I AEW   Q + I P
Sbjct: 2   KRFY-KLVTSQAEPAGGFSIRLDGKPVKTPSGQMVVAPVSALADGIVAEW-AAQGENIVP 59

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MPL ++  TA++RV   R  + + +    + DL+  +     +L++    +Q     P
Sbjct: 60  DTMPLTQILITAIDRVAGERKTMTDMVAVYLDTDLLCYQTEDPPELSA----QQNAAWAP 115

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
              W     G   +V       +Q +   K V   M   D Y+      +   + S+V+ 
Sbjct: 116 ARDWFARVSGVALIVTPGLSAIRQPEAAHKYVRQAMDAMDLYQFTVFQLVTVVSGSIVLG 175

Query: 274 IGIFRGKL 281
           +    G +
Sbjct: 176 LAFMDGAV 183


>gi|45190467|ref|NP_984721.1| AEL140Cp [Ashbya gossypii ATCC 10895]
 gi|44983409|gb|AAS52545.1| AEL140Cp [Ashbya gossypii ATCC 10895]
          Length = 322

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 110/266 (41%), Gaps = 39/266 (14%)

Query: 95  RFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLG--LAKAIGAEWDYQQTDGIR 152
           +F++KV    A +G   TV +D + ++TP   PL++      LA  +  EW    +  ++
Sbjct: 55  KFWDKVDL--AREGGHVTVHIDGKPVRTPLGSPLRVDERRGILAHMLREEWAGLTSLAVK 112

Query: 153 PFMMPLMKLA--CTALERV------PLT-------RPKIIEHLMKKFNQDLVFCRAPADN 197
           P+ +PL  L   C  LE V      P T       R  I + L++  + D + C +P  +
Sbjct: 113 PYSLPLTSLVSRCIDLETVSAPGCHPDTVAKVGGDRSAISQGLLRYLDTDTLLCFSP-RS 171

Query: 198 DLTSGVHERQVQKIDPLLKWVES---EFGFKPVVY-------SSFFGGKQEDGLIKTVEN 247
           +    + + Q +   P++  VE+   E   KPV             G  Q +        
Sbjct: 172 EFEGALRKAQDEMYKPIIAGVETLLAEVSGKPVSLRCLDADVHGLRGNVQSEDTRAAAGK 231

Query: 248 LMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGK---------LQIEEAIELIRLEEDLQV 298
            M     ++ A  + +     S +  I + + K         L  EE      LE   QV
Sbjct: 232 YMDNLSVWDFAVFEKVVLTTKSFICGILLLQNKIGKAAPALKLSTEEIARAATLETIYQV 291

Query: 299 DKWGLVEGGHDIDIADLRVQISSATV 324
           ++WG VE  HD++  D+R  I++A V
Sbjct: 292 ERWGEVEDTHDVNHRDIRRNINAAAV 317


>gi|353232920|emb|CCD80275.1| putative ATP synthase mitochondrial F1 complex assembly factor 2
           [Schistosoma mansoni]
          Length = 184

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 83/178 (46%), Gaps = 14/178 (7%)

Query: 156 MPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKI--DP 213
           MPL  L   AL+        ++  +M+  + D +  R    +DL       +VQ +  DP
Sbjct: 1   MPLTTLCNRALDTPADEHDILVNTIMQYADTDTICFRCQEPDDLV------KVQSLSWDP 54

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSL--- 270
           ++ WV   +  KP++  S     +   L K  E L +  + Y +  +  I +   +L   
Sbjct: 55  IINWVNKHYQIKPIITDSMTSLAKLSPLDK--EKLTRYFNSYNIWGLTGIKSCVENLKSV 112

Query: 271 VIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGL 328
            + + +  G      A+EL ++E   QV++WG V   HD++ ADL  ++S+A +FL L
Sbjct: 113 YLTLAMLDGYCSAARAVELSQIEMLFQVNRWGDVPSYHDVENADLNARVSAA-LFLAL 169


>gi|398826075|ref|ZP_10584342.1| chaperone required for the assembly of F1-ATPase [Bradyrhizobium
           sp. YR681]
 gi|398222007|gb|EJN08398.1| chaperone required for the assembly of F1-ATPase [Bradyrhizobium
           sp. YR681]
          Length = 264

 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 101/212 (47%), Gaps = 8/212 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY++    EA+   G+ + LD + ++TPS R + +P+  LA A+ AE    Q + I P
Sbjct: 30  KRFYKEAGVTEAE--GGFAITLDGKPIRTPSGRQVIIPSRALAAAVAAE-WAAQGETIDP 86

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             M L ++A + +E V      + E L K F  DL+F RA     L +    R+    DP
Sbjct: 87  MTMALTRIANSVVEGVVGRVELVAEDLAKYFESDLLFYRAGHPEGLVA----REGAHWDP 142

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           +L W     G   ++       KQ D  +K   + + + D + +AA+  +     S ++A
Sbjct: 143 VLFWAAETLGAHFILSEGVMHVKQPDEALKAARSALPE-DAWSVAALHVVTTLTGSALLA 201

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWGLVE 305
           + +  G     +      ++ED  ++KWG+ E
Sbjct: 202 LALAHGVRDAGQVWTAAHVDEDWNIEKWGVDE 233


>gi|296284588|ref|ZP_06862586.1| ATP12 ATPase [Citromicrobium bathyomarinum JL354]
          Length = 233

 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 53/212 (25%), Positives = 93/212 (43%), Gaps = 7/212 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRF+++ + R  +   GW V LD R +KT    P  +PT  L + + AEW     +   P
Sbjct: 2   KRFWKEATLRAVE--GGWQVWLDERAVKTRGGAPQVVPTRALGELLRAEW-AATGEEFAP 58

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             +PL  LA  A++        II  L+   + D +  RA  D      +  RQ +  +P
Sbjct: 59  EDLPLRDLADRAIDAARAAPEPIITRLLGFADGDTLCYRAEPDE----AIAHRQAEVWEP 114

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           ++  +E++ G +           Q +  +  + + ++  + + L  +D  A+ A SL IA
Sbjct: 115 IIGRIEADLGIQLTRTHGILHRPQSEQSLAAIRSRLETENAFALVGLDIAASLAASLCIA 174

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWGLVE 305
           +         +       LE+D Q ++WG  E
Sbjct: 175 LAGLDEDADPQALWGAANLEQDWQAERWGFDE 206


>gi|242002306|ref|XP_002435796.1| hypothetical protein IscW_ISCW019217 [Ixodes scapularis]
 gi|215499132|gb|EEC08626.1| hypothetical protein IscW_ISCW019217 [Ixodes scapularis]
          Length = 355

 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 56/242 (23%), Positives = 100/242 (41%), Gaps = 45/242 (18%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRF++ V   +++    + V LD R LKTP      +P   LA A+  EWD Q       
Sbjct: 138 KRFFKNVGIVKSE--GKFEVCLDQRKLKTPLGNHFTVPNEALAVAVATEWDAQ------- 188

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
                                      +K+ NQ  +      +  L +  H+ +      
Sbjct: 189 ---------------------------LKEINQHEMHLTTLCNTVLDNPSHKTEESLAAE 221

Query: 214 LLKWVESE---FGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSL 270
           +L+++ES+    G K   +S        +   +T    ++    Y L  +  +  A  SL
Sbjct: 222 ILEFLESDTVWHGVKLDTWSDLASSSLPE---ETSSAFLRHLLSYSLWGLTGLLYATESL 278

Query: 271 ---VIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLG 327
              V+ +      + +++A+ L RLE + Q  +WG VE  HD+D   LR ++++A +F+ 
Sbjct: 279 KSAVLCMAAVSRVVDVDQAVSLSRLETEFQTSRWGSVEWAHDLDREQLRSRVAAALLFVQ 338

Query: 328 LS 329
           L+
Sbjct: 339 LT 340


>gi|345560282|gb|EGX43407.1| hypothetical protein AOL_s00215g143 [Arthrobotrys oligospora ATCC
           24927]
          Length = 384

 Score = 64.7 bits (156), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 63/285 (22%), Positives = 122/285 (42%), Gaps = 54/285 (18%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLG--LAKAIGAEWDYQQT--D 149
           +RF+E V  +  D    + ++LD R++KT +K  + +P     LA A+  EW   +   +
Sbjct: 92  ERFWEDVHLKVVD--GRYQILLDARSIKTSAKNDVSVPVNKPLLAYALQVEWATMRNSKE 149

Query: 150 GIRPFMMPLMKLACTALE--------------------------RVPLTRPKIIEHLMKK 183
            ++   +PL  L   A++                           V  TR +I + +M  
Sbjct: 150 ALKSHFIPLTSLTSRAIDLEVAEKDSASVETIEATSEGEEGGEVDVRNTREQITDFVMGY 209

Query: 184 FNQDLVFCRAPADNDLTSGVHERQVQ--KID---PLLKWVE-------SEFGFKPVVYSS 231
            + D VF  +P      +   E+Q++  ++D    +++W +        E     V+   
Sbjct: 210 LDTDTVFMISPTRGGHLAAAGEKQLRDRQLDVAHDIIEWAQENIPVPKGEDKLDFVLSDG 269

Query: 232 FFG---GKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRG-------KL 281
             G     Q D   + + +++ K   +EL  ++     + SL++A+ +          K 
Sbjct: 270 DHGILPSSQSDRTKQILRDMISKFSAWELVGLECAVILSKSLLVALRLVMENRKTADIKW 329

Query: 282 QIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFL 326
            +E+A +   LE D Q+++WGLVE  HD+  ADLR  + +  + +
Sbjct: 330 DVEDAAKACNLETDFQIEQWGLVEDTHDVGHADLRRGLGAVVLLV 374


>gi|90083527|dbj|BAE90846.1| unnamed protein product [Macaca fascicularis]
          Length = 133

 Score = 64.7 bits (156), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 53/89 (59%), Gaps = 3/89 (3%)

Query: 243 KTVENLMKKTDDYE---LAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVD 299
           KT E L+     Y    L  I+ +AA   SLV+ +G+    L +E+A+ L RLEE+ Q+ 
Sbjct: 31  KTREVLVSHLASYNTWALQGIEFVAAQLKSLVLTLGLIDLHLTVEQAVLLSRLEEEYQIQ 90

Query: 300 KWGLVEGGHDIDIADLRVQISSATVFLGL 328
           KWG +E  HD ++ +LR + ++ T+F+ L
Sbjct: 91  KWGNIEWAHDYELQELRARTAAGTLFIHL 119


>gi|363756026|ref|XP_003648229.1| hypothetical protein Ecym_8121 [Eremothecium cymbalariae
           DBVPG#7215]
 gi|356891429|gb|AET41412.1| Hypothetical protein Ecym_8121 [Eremothecium cymbalariae
           DBVPG#7215]
          Length = 320

 Score = 64.7 bits (156), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 66/267 (24%), Positives = 110/267 (41%), Gaps = 41/267 (15%)

Query: 95  RFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPT--LGLAKAIGAEWDYQQTDGIR 152
           +F++KV+ ++ D  N  T+ +    ++TP    L +P+  + LA  +  EW       I+
Sbjct: 53  KFWDKVTLKKCD--NTLTLQIYGNPVRTPLGNSLSIPSNRVILAHMLKDEWSNVTKLSIK 110

Query: 153 PFMMPLMKLA--CTALERV--PLTRPKII-----------EHLMKKFNQDLVFCRAPADN 197
              +PL  +   C  L+ V  P T P+++           E L++  + D + C +P   
Sbjct: 111 THSLPLTSIVSRCIDLQLVSKPGTDPELLAKIGGGQDVISESLLRYLDTDTLLCFSPKSE 170

Query: 198 DLTSGVHERQVQKID-PLLKWVESEFGFK---PVVYS-------SFFGGKQEDGLIKTVE 246
               G   R   KI  P+L  VES  G     PV             G +Q D       
Sbjct: 171 --YEGALRRAQDKIYLPILSAVESFLGKYSDLPVRLQLLDSDLHGLRGNRQSDSTRAAAL 228

Query: 247 NLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGK---------LQIEEAIELIRLEEDLQ 297
             ++  + ++LA  +       S +  I + + K         + +E+      LE   Q
Sbjct: 229 KYLRSLNTWDLAVFEKTVLTTKSFICGIILLQNKTNDATKAMQMTMEDIANAATLETIYQ 288

Query: 298 VDKWGLVEGGHDIDIADLRVQISSATV 324
           VDKWG VE  HD+D  D+R  I +A +
Sbjct: 289 VDKWGEVEDTHDVDKRDIRRNIIAAGI 315


>gi|347832156|emb|CCD47853.1| hypothetical protein [Botryotinia fuckeliana]
          Length = 375

 Score = 64.7 bits (156), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 66/279 (23%), Positives = 118/279 (42%), Gaps = 45/279 (16%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLG--LAKAIGAEWDY--QQTD 149
           KRF++ V+ ++ ++G    + LD R L+ PSK  L +P     LA AI  EWD       
Sbjct: 99  KRFWKDVNVQDTEEG--LQIFLDKRALRRPSKDILTVPHHKPHLASAIALEWDLLVSAQQ 156

Query: 150 GIRPFMMPLMKLACTALERVP-------LTRPKIIEHLMKKFNQDLVFCRAPADNDLTSG 202
            ++  ++P+  L   AL+ +          R  I+  +M+  + D + C AP   +   G
Sbjct: 157 ALKTHLIPMTSLVNRALDIIDEENEGRDTIRNHIVTTVMRYLDTDSLLCWAPEAPEDPPG 216

Query: 203 VHERQVQKID-----------PLLKWVESEFG----FKPVVYSSFFGGKQEDGLIK-TVE 246
            +E  V +++           P+++++  +        PV+ +     K +  + K  + 
Sbjct: 217 -YETHVDRVESLRSIQRKSAEPIIQFLSEKVWPGVELIPVLDADSIVPKSQPQMTKDIIR 275

Query: 247 NLMKKTDDYELAAIDAIAAAAHSLVIAIGIF---------------RGKLQIEEAIELIR 291
             +     +ELA ++    A  SL+ A  +                  K  +EEA +   
Sbjct: 276 GWVSGLPPFELAGLERGVLAGKSLLGAARLVVEWSTELAHLRDEAAEKKFGVEEAAKAAS 335

Query: 292 LEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGLSR 330
           LE D Q   WG VE  HD++  D+R Q+ S  + +   R
Sbjct: 336 LEVDWQTGMWGAVEDTHDVEREDIRRQLGSVVLLVSGER 374


>gi|340057944|emb|CCC52297.1| conserved hypothetical protein, fragment, partial [Trypanosoma
           vivax Y486]
          Length = 349

 Score = 64.3 bits (155), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 54/223 (24%), Positives = 100/223 (44%), Gaps = 12/223 (5%)

Query: 96  FYEKVSTREADDGNGW-TVMLDYRTLKT-PSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           F++ V     D  + W TV++D R +K   S   L +P+  +A A   E+  +Q + +  
Sbjct: 135 FWKDVGVAGLDGHSDWYTVLVDGRKVKAFGSNNVLAIPSEAMAYACAYEYG-EQKEYLNK 193

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
            +MPL  +   AL   P      +++LM  +  D ++ R+P        V   Q + I P
Sbjct: 194 LLMPLTDICSGALTVAPQMIAPRVDYLMSFYQNDNMYFRSPP-------VAAEQDKLISP 246

Query: 214 LLKWVESEFGFK-PVVYSSFFGGKQEDGLIKTVENLMKKT-DDYELAAIDAIAAAAHSLV 271
           + +W    F    P +             +K  ++L+  + + Y++ A+   A    SL+
Sbjct: 247 IAEWFSQTFEVHVPRILGIGHPQIHPSSTLKVRDHLLSMSMNPYQIVALCVAAQFTSSLL 306

Query: 272 IAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIAD 314
           + + +F   + +  A+ + R EE   +   G++EG HDI  AD
Sbjct: 307 LPLAMFHKVVDLPTALTINRAEEWHNMRTQGVIEGYHDIREAD 349


>gi|154302734|ref|XP_001551776.1| hypothetical protein BC1G_09482 [Botryotinia fuckeliana B05.10]
          Length = 292

 Score = 64.3 bits (155), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 66/279 (23%), Positives = 118/279 (42%), Gaps = 45/279 (16%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLG--LAKAIGAEWDY--QQTD 149
           KRF++ V+ ++ ++G    + LD R L+ PSK  L +P     LA AI  EWD       
Sbjct: 16  KRFWKDVNVQDTEEGL--QIFLDKRALRRPSKDILTVPHHKPHLASAIALEWDLLVSAQQ 73

Query: 150 GIRPFMMPLMKLACTALERVP-------LTRPKIIEHLMKKFNQDLVFCRAPADNDLTSG 202
            ++  ++P+  L   AL+ +          R  I+  +M+  + D + C AP   +   G
Sbjct: 74  ALKTHLIPMTSLVNRALDIIDEENEGRDTIRNHIVTTVMRYLDTDSLLCWAPEAPEDPPG 133

Query: 203 VHERQVQKID-----------PLLKWVESEFG----FKPVVYSSFFGGKQEDGLIK-TVE 246
            +E  V +++           P+++++  +        PV+ +     K +  + K  + 
Sbjct: 134 -YETHVDRVESLRSIQRKSAEPIIQFLSEKVWPGVELIPVLDADSIVPKSQPQMTKDIIR 192

Query: 247 NLMKKTDDYELAAIDAIAAAAHSLVIAIGIF---------------RGKLQIEEAIELIR 291
             +     +ELA ++    A  SL+ A  +                  K  +EEA +   
Sbjct: 193 GWVSGLPPFELAGLERGVLAGKSLLGAARLVVEWSTELAHLRDEAAEKKFGVEEAAKAAS 252

Query: 292 LEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGLSR 330
           LE D Q   WG VE  HD++  D+R Q+ S  + +   R
Sbjct: 253 LEVDWQTGMWGAVEDTHDVEREDIRRQLGSVVLLVSGER 291


>gi|335308501|ref|XP_003361256.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor
           2-like [Sus scrofa]
          Length = 419

 Score = 64.3 bits (155), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 61/232 (26%), Positives = 100/232 (43%), Gaps = 37/232 (15%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+ VS  + +   G+ + LD+R LKTP  +   +P+  LA A+  EWD QQ D I+P
Sbjct: 45  KRFYQNVSITQGE--GGFEINLDHRKLKTPQAKLFTVPSEALAVAVATEWDSQQ-DTIKP 101

Query: 154 FMMPLMKLACTALERVPLTRPKI----IEHLMKKFNQDLVFCRAPA-------------D 196
           + M L             TR ++           + Q    C  PA              
Sbjct: 102 YTMHLEG-----------TRRRVDGPWSPVWTSTWTQPGCLCLPPALPGHVSSSGFVLGR 150

Query: 197 NDLT-SGVHERQVQKI--DPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTD 253
            ++T SG H    Q +   P   W  + +G +    +S  G        + + + +   +
Sbjct: 151 QEITGSGGHRLPGQLLPESPTGPW--TRYGVEISSSTSILGPSIPARTREALVSHLASYN 208

Query: 254 DYELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQ-VDKWGLV 304
            + L  I+ +     S+V+ +G+    L +E A+ L RLEE+ Q +  WGL+
Sbjct: 209 MWALQGIEFVVTQLKSMVLTLGLIDLYLTVERAVLLSRLEEEYQHLAAWGLL 260


>gi|341614657|ref|ZP_08701526.1| ATP12 ATPase [Citromicrobium sp. JLT1363]
          Length = 233

 Score = 64.3 bits (155), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 64/131 (48%), Gaps = 7/131 (5%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRF+ + + READ   GW V LD R +KT    P  +PT  L + + AEW     D ++P
Sbjct: 2   KRFWTEATLREAD--GGWQVWLDERAVKTRCGSPQVVPTQALGEVLRAEW-ADAPDEVQP 58

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
              P+  LA  AL+ +   R  ++  L+   + D +  RA  D      V  RQ +  +P
Sbjct: 59  DHFPMRDLADRALDTLSKERESVVSRLLGFADGDTLCYRAEPDE----AVARRQAKMWEP 114

Query: 214 LLKWVESEFGF 224
           ++  +E + G 
Sbjct: 115 IVTGIEEDLGI 125


>gi|406861423|gb|EKD14477.1| hypothetical protein MBM_07198 [Marssonina brunnea f. sp.
           'multigermtubi' MB_m1]
          Length = 379

 Score = 63.9 bits (154), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 71/282 (25%), Positives = 114/282 (40%), Gaps = 53/282 (18%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLP--TLGLAKAIGAEWDY--QQTD 149
           KRF+ +V  + AD+G    + LD R L+ PSK  L +P     LA AI  EWD       
Sbjct: 96  KRFWREVHVKGADEGL--QIHLDTRPLRRPSKTILTIPPSKPALATAIALEWDLLTSAQQ 153

Query: 150 GIRPFMMPLMKLACTALERV-----------PLTRPKIIEHLMKKFNQDLVFCRAPADND 198
            ++  ++PL  L   AL+             P+ R  I   LM+  + D + C AP    
Sbjct: 154 ALQQHLIPLTSLVSRALDIADEDASTSSGAGPI-RTGITTSLMRYLDTDSLLCWAPEAVA 212

Query: 199 LTSGVHERQVQKIDPLLKWVESEFGFKPVVY--SSFFGGKQ------EDGLIK------- 243
              G +ER   +    L+ ++       + Y     + G +      ED ++        
Sbjct: 213 DPPG-YERHESREAEGLRSIQKRHAVPIISYLTEKVWPGVEIVEILDEDSIMPKEQPRMT 271

Query: 244 --TVENLMKKTDDYELAAIDAIAAAAHSLVIA----------IGIFRG-------KLQIE 284
              ++  +     +ELA ++    A   L+ A          +G  R        K  +E
Sbjct: 272 RDVIQGWVMGLPAFELAGLERAVLAGKGLLGAARLVVEWSEDLGHLRAGAQGAGEKFGVE 331

Query: 285 EAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFL 326
           EA ++  LE D Q   WG VE  HD++  D+R Q+ S  + +
Sbjct: 332 EAAKVASLEVDWQTGMWGAVEDTHDVEREDVRRQLGSVVLLV 373


>gi|351707711|gb|EHB10630.1| ATP synthase mitochondrial F1 complex assembly factor 2
           [Heterocephalus glaber]
          Length = 119

 Score = 63.9 bits (154), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 55/93 (59%), Gaps = 3/93 (3%)

Query: 243 KTVENLMKKTDDYELAA---IDAIAAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVD 299
           KT E L+     Y + A   I+ + A   S+V+ +G+   +L +E+A+ L RLEE+ Q+ 
Sbjct: 17  KTREVLVSHLASYNMWALQGIEFVMAQLKSMVLTLGLIDLRLTVEQAVLLSRLEEEYQIQ 76

Query: 300 KWGLVEGGHDIDIADLRVQISSATVFLGLSRRN 332
           KWG +E  HD ++ +LR + ++ T+F+ L   N
Sbjct: 77  KWGSIEWAHDYELQELRARTAAGTLFVHLCSEN 109


>gi|378729878|gb|EHY56337.1| ATP synthase mitochondrial F1 complex assembly factor 2 [Exophiala
           dermatitidis NIH/UT8656]
          Length = 375

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 77/322 (23%), Positives = 135/322 (41%), Gaps = 56/322 (17%)

Query: 51  TFSSPSDKINE-----SIYIKGRKQETASSSSSSVTMPMSFMTGSIVGKRFYEKVSTREA 105
           T S   D++ E      +  +G++      SS   T P+         KRF++ V  +E 
Sbjct: 60  TSSQYGDRVGERRRKAELLKQGKELRAEQQSSGKRTSPLK--------KRFWKDVHVKEV 111

Query: 106 DDGNGWTVMLDYRTLKTPSKRPLKLPTLG--LAKAIGAEWDYQQT--DGIRPFMMPLMKL 161
            +G  + V LD R ++TP+K  L +P     LA AI  EWD  ++    ++   +P+  +
Sbjct: 112 PEG--YQVHLDSRPVRTPAKTILTVPRSKPHLAHAIAIEWDMLESAQQALKNHNIPMTSI 169

Query: 162 ACTALE-------RVPLTRPKIIEHLMKKFNQDLVFCRAPADN-----------DLTSGV 203
              A +            R +II  +M+  + D + C AP  +           D    +
Sbjct: 170 VARAQDISEAEARGSTAIREEIITVMMRYLDTDTLLCWAPEHSTHDATQLETHPDRKETL 229

Query: 204 HERQVQKIDPLLKWVESEFG----FKPVVYSSFFGGKQEDGLIKTV-ENLMKKTDDYELA 258
            + Q++   P++ ++ +        KPV+        Q+  + ++V    M     YELA
Sbjct: 230 RQIQIKTATPIISYLTTTVWPGVELKPVLEEGSIMPVQQSEMTRSVIRGWMAGLPAYELA 289

Query: 259 AIDAIAAAAHSLVIAIGI-------FR-------GKLQIEEAIELIRLEEDLQVDKWGLV 304
           A++    A  S+++   +       FR        +  IEEA E   +E   Q   WG V
Sbjct: 290 ALERAVLAGKSVLVGARLVVEWSEEFRDVQRSSEKRFGIEEAAEAATVEVRWQTAMWGEV 349

Query: 305 EGGHDIDIADLRVQISSATVFL 326
           E  HD++  D+R Q+ SA + +
Sbjct: 350 EDTHDVENEDIRRQLGSAILLV 371


>gi|320589842|gb|EFX02298.1| chitin synthase activator [Grosmannia clavigera kw1407]
          Length = 1349

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 71/289 (24%), Positives = 116/289 (40%), Gaps = 65/289 (22%)

Query: 98   EKVSTREADDGNGWTVMLDYRTLKTPSKR-PLKLPTLG--LAKAIGAEWDY-----QQTD 149
            EK   +EA   +   + LD RT++ P+ R PL+LP     LA A+  EWD      Q + 
Sbjct: 1066 EKTKEKEA---SALLIGLDSRTVRHPTTRQPLRLPAHKQLLAHALAVEWDQLASVRQASQ 1122

Query: 150  GIRPFMMPLMKLACTALE-------------RVPLTRPKIIEHLMKKFNQDLVFC----- 191
            G R   +PLM L C A++              V   R  +I +L++  + D + C     
Sbjct: 1123 GHR---VPLMSLVCRAVDLEAEAEAEAETAANVGPLRTALIANLLRYLDTDSLLCWEDEG 1179

Query: 192  ----RAPADNDLTSGV------HERQVQKIDPLLKWVESE----FGFKPVV-----YSSF 232
                R    +   S V      H+ Q +  +P+L +V          +PV+      S  
Sbjct: 1180 GESRRVAVGHGSASTVRESLTLHQLQRRTAEPILAYVREHVWPGLDIQPVLGDGTNPSRL 1239

Query: 233  FGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGKLQ---------- 282
                    + + V+  +   D ++LA ++    A  S+++A  +  G  Q          
Sbjct: 1240 LPRPHPPPVREAVQRWLLALDSWDLAGVERATLAGKSILVAARLVGGWQQHRAQPGLVPN 1299

Query: 283  ----IEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLG 327
                 EEA+    +E   Q   WG VE  HD++ AD+R    SA + + 
Sbjct: 1300 AAFSAEEAVAATNMEIAFQTALWGEVEDTHDVEAADMRRHFGSAVLLVA 1348


>gi|71667291|ref|XP_820596.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70885947|gb|EAN98745.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 392

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 63/273 (23%), Positives = 117/273 (42%), Gaps = 17/273 (6%)

Query: 61  ESIYIKGRKQETASS----SSSSVTMPMSFMTGSIVGKR-FYEKVSTREADDGNGW-TVM 114
           + +Y +  KQE   S      S   M +S    S    R F++ V+    D   GW TV+
Sbjct: 102 QELYDRLEKQEEEESRVLTEDSLYQMDVSMRDRSRAAVRVFWKDVNVGPLDGHEGWYTVL 161

Query: 115 LDYRTLKT-PSKRPLKLPTLGLAKAIGAEWDYQQTDGIRPFMMPLMKLACTALERVPLTR 173
           +D R +K   S   L +P   +A     E+  +Q+  +   +MP+  +   AL   P   
Sbjct: 162 VDGRKVKAFESTHVLAIPNEAMAYCCAQEYA-EQSGYLNKLLMPMTDMCSGALTVSPQMI 220

Query: 174 PKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDPLLKWVESEFGFK-PVVYSSF 232
              +++LM  +  D ++ RA       + + E Q + I P++ W    F  + P +    
Sbjct: 221 ALRVDYLMSFYQNDNIYFRA-------APIAEEQDRVIGPIVDWFSRAFNVEVPRIVGIG 273

Query: 233 FGGKQEDGLIKTVENLMKKT-DDYELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIR 291
                    +K  + L+  + + Y++ A+   A    SL++ + +F   + +  A+ +  
Sbjct: 274 HPHIPIGSKLKVRDALLAMSMNPYQIVALCVAAQFTSSLLLPLAMFNSVVDLPTALSINS 333

Query: 292 LEEDLQVDKWGLVEGGHDIDIADLRVQISSATV 324
           LEE       G ++G HDI  AD+  ++ +  V
Sbjct: 334 LEERHNTSTEGAIQGYHDIRDADVVTKLCACAV 366


>gi|343958290|dbj|BAK63000.1| ATP synthase mitochondrial F1 complex assembly factor 2,
           mitochondrial precursor [Pan troglodytes]
          Length = 110

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/89 (35%), Positives = 54/89 (60%), Gaps = 3/89 (3%)

Query: 243 KTVENLMKKTDDYE---LAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVD 299
           KT E L+     Y    L  I+ +AA   S+V+ +G+   +L +E+A+ L RLEE+ Q+ 
Sbjct: 8   KTREVLVSHLASYNTWALQGIEFVAAQLKSMVLTLGLIDMRLTVEQAVLLSRLEEEYQIQ 67

Query: 300 KWGLVEGGHDIDIADLRVQISSATVFLGL 328
           KWG +E  HD ++ +LR + ++ T+F+ L
Sbjct: 68  KWGNIEWAHDYELQELRARTAAGTLFIHL 96


>gi|13358944|dbj|BAB33085.1| hypothetical protein [Macaca fascicularis]
          Length = 110

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/89 (37%), Positives = 53/89 (59%), Gaps = 3/89 (3%)

Query: 243 KTVENLMKKTDDYE---LAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVD 299
           KT E L+     Y    L  I+ +AA   SLV+ +G+    L +E+A+ L RLEE+ Q+ 
Sbjct: 8   KTREVLVSHLASYNTWALQGIEFVAAQLKSLVLTLGLIDLHLTVEQAVLLSRLEEEYQIQ 67

Query: 300 KWGLVEGGHDIDIADLRVQISSATVFLGL 328
           KWG +E  HD ++ +LR + ++ T+F+ L
Sbjct: 68  KWGNIEWAHDYELQELRARTAAGTLFIHL 96


>gi|85707665|ref|ZP_01038731.1| hypothetical protein NAP1_00480 [Erythrobacter sp. NAP1]
 gi|85689199|gb|EAQ29202.1| hypothetical protein NAP1_00480 [Erythrobacter sp. NAP1]
          Length = 232

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 7/209 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY++V  + A    GW V LD R ++T       +PT  LA+A+ AEWD  Q + I P
Sbjct: 2   KRFYKEVDIQPA--LGGWQVTLDGRAIRTQKGAGQIVPTEALARALAAEWD-AQGEKIDP 58

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             +PL  +A  AL+ +      + + ++   + D +  RA  D  L    + RQ +  +P
Sbjct: 59  ATLPLRDMADYALDVIAPDPAAVADKVLTYGDTDTLLYRADPDEPL----YVRQQELWEP 114

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           + K  E   G + V  S      Q +  +  + + + K   + LA ++A+ + A SL++A
Sbjct: 115 ITKRFEERHGIELVRVSGIVHRPQNEATLAKLRDALGKQTPFALAGMEAMTSLAASLMVA 174

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           +             +   LEE+ Q + WG
Sbjct: 175 LEASEPGADALALWQAASLEEEWQAELWG 203


>gi|323138144|ref|ZP_08073217.1| ATP12 ATPase [Methylocystis sp. ATCC 49242]
 gi|322396606|gb|EFX99134.1| ATP12 ATPase [Methylocystis sp. ATCC 49242]
          Length = 276

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 103/215 (47%), Gaps = 13/215 (6%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           +RFY+ VS  EA+   G++V+LD R + TP++R + +P   LA+A+ AE   +Q + I P
Sbjct: 41  RRFYKTVSVGEAE--GGYSVLLDGRPVNTPARRRVVVPPRELAEAMAAE-WAEQGETINP 97

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MPL KL  + ++ V     ++   L+K    DL+  RA     L +     Q    DP
Sbjct: 98  ATMPLTKLVNSTIDGVARQMAEVESELVKYAGSDLICYRAGEPESLVAA----QSAAWDP 153

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKK------TDDYELAAIDAIAAAA 267
           LL +     G +  +        Q +  +  +   ++       +  + L+++  +    
Sbjct: 154 LLAFARDRLGARLSLAEGVMFAAQSEAALAAIAAAVRGYVGEGPSAPFRLSSLHVMTTLT 213

Query: 268 HSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
            SL++ I    G+L++++A     ++ED Q+  WG
Sbjct: 214 GSLMVGIATALGELKVDDAWAAAHVDEDFQMRAWG 248


>gi|328543396|ref|YP_004303505.1| ATP12 chaperone protein [Polymorphum gilvum SL003B-26A1]
 gi|326413141|gb|ADZ70204.1| ATP12 chaperone protein [Polymorphum gilvum SL003B-26A1]
          Length = 267

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 7/209 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY   +   A+   G+ V+LD R ++TP K+ L L +  LA+A+ AE    Q   I P
Sbjct: 34  KRFYTAATAAPAE--GGFAVLLDGRAVRTPGKKALVLASKRLAEAVAAE-WAAQEGVINP 90

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MPL ++A  A++ V      + + +      D +  RA     L     ERQ    DP
Sbjct: 91  ATMPLTRIANAAIDGVAERFAAVADEIAAYAGNDALCYRAGEPARLV----ERQTALWDP 146

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           +L+      G + V+        Q   L+      +++    ELAA+  + +   S V+A
Sbjct: 147 ILEETGRALGGRFVLACGLMPVVQPAPLVAGFRAALERFSGLELAALSTVTSLTGSAVLA 206

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           + +  G+L  +       ++ED   ++WG
Sbjct: 207 LALAEGRLTADAVWTAAHVDEDWNAEQWG 235


>gi|367016553|ref|XP_003682775.1| hypothetical protein TDEL_0G01970 [Torulaspora delbrueckii]
 gi|359750438|emb|CCE93564.1| hypothetical protein TDEL_0G01970 [Torulaspora delbrueckii]
          Length = 318

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 70/269 (26%), Positives = 113/269 (42%), Gaps = 40/269 (14%)

Query: 93  GKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLG--LAKAIGAEWDYQQTDG 150
           G++F+EKVS +  DDG+ + V LD +T+ TP    L +      LA  +  EW    +  
Sbjct: 49  GEKFWEKVSLK--DDGSQFLVQLDSKTVLTPLGNALAVDKRRSLLAMLLKKEWTNLPSLA 106

Query: 151 IRPFMMPLMKLA--CTALERV------PLTRPKI---IEH----LMKKFNQD--LVFC-R 192
           I+   +PL  L   C  LE V      P  R KI    EH    L++  + D  LVFC +
Sbjct: 107 IKTHALPLTSLVSRCIDLENVNKPDSDPEMRAKIGGDREHIANDLLRYLDTDTLLVFCPQ 166

Query: 193 APADNDLTSGVHERQVQKIDPLLKWVESEFGFKPVVY-------SSFFGGKQEDGLIKTV 245
           A  +  L     ER +  I  + K++  ++   P+             G  Q +   K  
Sbjct: 167 AEFEGALRKAQDERYLPIIASVEKFL-GQYSTSPIKLRVLDADVDGLRGNSQTNETRKAA 225

Query: 246 ENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGKL----------QIEEAIELIRLEED 295
           +  ++    ++LA  +       S +  + + + K            +E   +   LE  
Sbjct: 226 KKFLESLSLWDLAIFEKTVLTTKSFICGVLLLQNKALDKSAEGLTSTMESVAQAATLEII 285

Query: 296 LQVDKWGLVEGGHDIDIADLRVQISSATV 324
            Q D+WG VE  HD+D  D+R  I +A +
Sbjct: 286 HQTDRWGEVEDTHDVDKRDVRRNIHAAGI 314


>gi|255716222|ref|XP_002554392.1| KLTH0F04246p [Lachancea thermotolerans]
 gi|238935775|emb|CAR23955.1| KLTH0F04246p [Lachancea thermotolerans CBS 6340]
          Length = 317

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 69/341 (20%), Positives = 131/341 (38%), Gaps = 69/341 (20%)

Query: 20  SSFTTFRTRHLCSVATVHQSPQYDDDPTSSFTFSSPSDKINESIYIKGRKQETASSSSSS 79
           ++F + R+ HLCSV    ++     D +      + +++ ++++                
Sbjct: 5   ATFRSLRSAHLCSVRAYARATSLGIDSSVENNLQTETNRASKTL---------------- 48

Query: 80  VTMPMSFMTGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPT--LGLAK 137
                         ++F+  VS +E D     TVMLD + L+TP    L +      LA 
Sbjct: 49  --------------QKFWNDVSVKECD--THLTVMLDNKPLRTPLGNALSVSKDRKLLAL 92

Query: 138 AIGAEWDYQQTDGIRPFMMPLMKLA--CTALERV--PLTRPKII-----------EHLMK 182
            +  EW    +  I+P  +P+  +   C  LE    P + P+++           E L++
Sbjct: 93  LLQNEWSSMSSLAIKPHSLPITSIVSRCIDLEYTAKPGSDPELVAKIGGDRSVISESLLR 152

Query: 183 KFNQDLVFCRAPADNDLTSGVHERQVQKIDPLLKWVE---SEFGFKPVVYS-------SF 232
             + D + C +P   +    +   Q +   P++  VE   S F   PV            
Sbjct: 153 YLDTDTLMCLSPR-AEYEGALRAAQDELYLPVISQVEKFLSRFAQDPVKLQILDADVHGL 211

Query: 233 FGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGKLQ---------I 283
            G  Q+    +     +     ++ A  +       S +  + +   K Q         +
Sbjct: 212 KGNLQDKNTKEAALAYLNSLSMWDFAVFEKAVLTTKSFLCGLLLLHNKSQNPSSDMKVTM 271

Query: 284 EEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATV 324
           E+  +   LE   QV++WG VE  HD+D  D+R  I++A++
Sbjct: 272 EKIAQFATLETIYQVERWGEVEDTHDVDKRDVRRNINAASI 312


>gi|448100651|ref|XP_004199402.1| Piso0_002840 [Millerozyma farinosa CBS 7064]
 gi|359380824|emb|CCE83065.1| Piso0_002840 [Millerozyma farinosa CBS 7064]
          Length = 361

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 65/290 (22%), Positives = 111/290 (38%), Gaps = 60/290 (20%)

Query: 95  RFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPT--LGLAKAIGAEWDYQQTDGIR 152
           +F++KV T   +D N + + LD RTL+TP   PL +P     LA  I  EW       I+
Sbjct: 71  KFWDKVDTEYVEDKNHYEIKLDSRTLRTPLGFPLAVPAEKKQLAYLIQHEWSSLPELKIK 130

Query: 153 PFMMPLMKLACTALERVPLTR-----PKIIE----------HLMKKFNQDLVFCRAPADN 197
              MPL  LAC +++           P++I           +L++ F+ D        D 
Sbjct: 131 LNSMPLSSLACRSIDLHNTANNEGVDPELITKVGKVDDIKLNLLRYFDTDTCLIFTTKD- 189

Query: 198 DLTSGVHERQVQKIDPLLKWVESEF-----------------GFKPV-VYSSFFGGKQED 239
           +    +  RQ +   PL+   E+ F                  F  +   +    G ++ 
Sbjct: 190 EYEGKLRARQDELYLPLIAEFENYFTHFAKQNHHLAHDSPQINFNTLDCETDGLRGNKQS 249

Query: 240 GLIKTVE-NLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGKLQ---------------- 282
            L++ +  + M +   +EL A++     A S +    + R                    
Sbjct: 250 ILVQAIAMDWMSQLSMFELVALEKAVLTAKSFLCGASLLRSNCSNQDRMNSFFQFNKPNE 309

Query: 283 -------IEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVF 325
                  + + +EL  LE   Q ++WG VE  HD+D  D    ++SA + 
Sbjct: 310 DAHFHKTVHDIVELGNLETIFQTNEWGEVEDTHDVDKVDWLRNLTSAALL 359


>gi|327296756|ref|XP_003233072.1| mitochondrial molecular chaperone [Trichophyton rubrum CBS 118892]
 gi|326464378|gb|EGD89831.1| mitochondrial molecular chaperone [Trichophyton rubrum CBS 118892]
          Length = 396

 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 66/269 (24%), Positives = 107/269 (39%), Gaps = 39/269 (14%)

Query: 88  TGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTL--GLAKAIGAEWDY 145
           T S + KRF++ V  +EA  G+   + LD R ++TP K+ L +P+    LA AI  EWD 
Sbjct: 59  TASPLRKRFWKDVHVKEAAGGH--QIYLDSRPVRTPEKKILTVPSSKPHLAHAIALEWDL 116

Query: 146 QQT--DGIRPFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGV 203
            +T     +  ++P+  +   A E +     K +  +  +  +  V  R    N  TS  
Sbjct: 117 LRTAQHATKYHLIPMTSITGRA-EDIAAEDAKGVTTIRDEITR--VMLR---KNQTTSDE 170

Query: 204 HERQVQKIDPLLKWVESEFG-----------FKPVV-YSSFFGGKQEDGLIKTVENLMKK 251
            +R  +       W                  KP +  +S     Q    +  +   +  
Sbjct: 171 AKRSARHCGRSRSWAAQALAEREREVWPGVELKPTLDANSIMPLPQPQQTVDVIRGWLSS 230

Query: 252 TDDYELAAIDAIAAAAHSLVIAIGI-------FRG--------KLQIEEAIELIRLEEDL 296
              Y+LA ++    A  SL++   +       FR            IEEA     LE   
Sbjct: 231 LSPYDLAGVERAGIATKSLLVGARVVSEWSENFRHLRPGGASRTFGIEEAAHASSLEVRW 290

Query: 297 QVDKWGLVEGGHDIDIADLRVQISSATVF 325
           Q++ WG VE  HD++  DLR Q+ S  + 
Sbjct: 291 QIENWGEVEDTHDVEREDLRRQLGSVILL 319


>gi|119576081|gb|EAW55677.1| ATP synthase mitochondrial F1 complex assembly factor 2, isoform
           CRA_b [Homo sapiens]
          Length = 169

 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 44/128 (34%), Positives = 66/128 (51%), Gaps = 10/128 (7%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+ VS  + +   G+ + LD+R LKTP  +   +P+  LA A+  EWD QQ D I+ 
Sbjct: 47  KRFYQNVSITQGE--GGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWDSQQ-DTIKY 103

Query: 154 FMMPLMKLACTALERVPLTRPK--IIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKI 211
           + M L  L  T+L+  P  R K  +I   +K  + D +  R      L     E Q  + 
Sbjct: 104 YTMHLTTLCNTSLDN-PTQRNKDQLIRAAVKFLDTDTICYRVEEPETLV----ELQRNEW 158

Query: 212 DPLLKWVE 219
           DP+++W E
Sbjct: 159 DPIIEWAE 166


>gi|456354594|dbj|BAM89039.1| conserved hypothetical protein [Agromonas oligotrophica S58]
          Length = 260

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 8/212 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+      A+   G+ V LD R ++TPS R + +P   LA+A  AE    Q D I P
Sbjct: 30  KRFYKDAGIAAAE--GGFNVTLDGRPIRTPSGRVVVIPARELAEAAAAE-WQAQGDSIDP 86

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MPL + A + ++ V      + E + K    DL+F RA     L S    R+ +  DP
Sbjct: 87  ATMPLTRFANSVVQSVVDRTDDVREDIAKYLQSDLLFYRAGHPEGLVS----REAEHWDP 142

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           +L W     G   ++        Q +  ++   + +  T  + +AA   +     S ++A
Sbjct: 143 VLDWARDALGAHFILSEGILHVTQPEAAVQAARSAL-PTGPWTVAAAHVVTTLTGSALLA 201

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWGLVE 305
           + +  G    +       ++ED    +WG  E
Sbjct: 202 LALLHGVRDADRVWAAAHVDEDWNAAQWGADE 233


>gi|167524958|ref|XP_001746814.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163774594|gb|EDQ88221.1| predicted protein [Monosiga brevicollis MX1]
          Length = 743

 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 59/234 (25%), Positives = 107/234 (45%), Gaps = 18/234 (7%)

Query: 97  YEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRPFMM 156
           Y   S R   DG+ + V LD R LKTP  +   + +  LA  +  EW   Q + + P  M
Sbjct: 519 YRSGSVRVEKDGDKYGVFLDQRHLKTPMGKKFSVHSDELAHIVAMEWA-TQGEHLTPATM 577

Query: 157 PLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDPLLK 216
            +  L+ TAL+           H  K+    +VF     D D  S +   + +  DPL+ 
Sbjct: 578 YVSALSNTALD-----------HPSKQMRDTVVF----RDADPESALSTFEARSWDPLVS 622

Query: 217 WVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGI 276
             +  +G  P+  +     +Q +  +  V + +     ++L+A++       SLVIA+ +
Sbjct: 623 KFQERYG--PLHTTRLLEIEQPETTLAAVVDRLYHLPHWQLSAMELATDTTRSLVIALAM 680

Query: 277 FRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGLSR 330
               L  +EA +  R E + Q+ ++G V   H ++ AD   ++S+A + + L++
Sbjct: 681 LEQDLTAQEAADAARAEVEFQIQRFGRVSWSHGMEQADTEGRLSAAALVMQLAQ 734


>gi|414341385|ref|YP_006982906.1| hypothetical protein B932_0367 [Gluconobacter oxydans H24]
 gi|411026720|gb|AFV99974.1| hypothetical protein B932_0367 [Gluconobacter oxydans H24]
          Length = 229

 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 97/212 (45%), Gaps = 19/212 (8%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWD-YQQTDGIR 152
           KRF++ V+  E D    +   LD R ++ P    L L +  LA+AI AEW    + +   
Sbjct: 5   KRFWKSVTLGEQD--GLFRPELDGRPIRLPKGAVLALSSRPLAQAIVAEWSRIPENEAFT 62

Query: 153 PFMMPLMKLACTALERVPLTRPKIIE--HLMKKFNQDLVFCRAPADNDLTSGVHERQVQK 210
           P  +PL ++A T +ER+   RP + E    + +   D   C      D T          
Sbjct: 63  PEQLPLTRIAGTMIERI---RPDLTEAREALLRHGLDDGLCYRKEQPDST---------- 109

Query: 211 IDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSL 270
           ++ + +W+  E G +P V        Q    I  +E L+ + ++ ELAA+  +     SL
Sbjct: 110 VERIFEWLAKE-GIQPSVTDGLMPVTQSGDYITGLERLLTRQNEAELAALGVLTQTFGSL 168

Query: 271 VIAIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           ++A+ +  G +  EEA+ +   +E  Q+  WG
Sbjct: 169 LLALALVSGAIDQEEAVSVANADERKQLLVWG 200


>gi|302419417|ref|XP_003007539.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
 gi|261353190|gb|EEY15618.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
          Length = 369

 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 93/356 (26%), Positives = 138/356 (38%), Gaps = 62/356 (17%)

Query: 21  SFTTFRTRHLCSVATVHQSPQYDDDPTSSFTFSSPSDKINESIYIKGRKQETASSSSSSV 80
           S T F+T  +  V      P+    P S+  FS+ S    E+     R++  A      +
Sbjct: 31  SSTVFKTADVAPVVGTGPPPEA---PRSAAEFSAESKLGQEAAAKLARRKRQAEM----L 83

Query: 81  TMPMSF-----MTGSIVG--KRFYEKVSTREADDGNGWTVMLDYRTLKTP-SKRPLKLPT 132
            MP        M G   G  +RF+++V   E D      VMLD R L+ P +   ++LPT
Sbjct: 84  EMPQEIRNAASMKGVKGGLKRRFWKEVRVEEVD--GALQVMLDNRPLRHPGTTNIIRLPT 141

Query: 133 LG--LAKAIGAEWD-----YQQTDGIRPFMMPLMKLACTAL--------ERVPLTRPKII 177
               LA A+  EWD     YQ T   +  ++PL  L C A+        E VP       
Sbjct: 142 SKPHLASAVAIEWDLLTSAYQAT---KQHLIPLTSLICRAIDIEANDNGEEVPSASAAAA 198

Query: 178 EHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDPLLK-WVESEFGFKPVVY-SSFFGG 235
               +    +     + A+ D      ER    +   L+  V       PV+  ++    
Sbjct: 199 AADGEAAPVEPAPFSSTANPDT-----ERPAADVLAYLRAHVWRGVSIAPVLEGNAIVPR 253

Query: 236 KQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA------------IGIFR----- 278
            Q DG+   V+  +     +ELA ++    A  S+V A             G  R     
Sbjct: 254 PQADGVRDIVKAWVSGLSAWELAGLERAVLAGKSVVAASRLVVEWSEDEPAGGLRPAREA 313

Query: 279 --GKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFL-GLSRR 331
              K  +E+A     LE   Q   WG VE  HD++  DLR Q  S  + + GL+RR
Sbjct: 314 ADDKFGVEQAAVATSLEVAWQTGHWGEVEDTHDVEKEDLRRQFGSVVLLVSGLNRR 369


>gi|146083835|ref|XP_001464851.1| conserved hypothetical protein [Leishmania infantum JPCM5]
 gi|398013715|ref|XP_003860049.1| hypothetical protein, conserved [Leishmania donovani]
 gi|134068946|emb|CAM67088.1| conserved hypothetical protein [Leishmania infantum JPCM5]
 gi|322498268|emb|CBZ33342.1| hypothetical protein, conserved [Leishmania donovani]
          Length = 304

 Score = 61.2 bits (147), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 55/225 (24%), Positives = 95/225 (42%), Gaps = 24/225 (10%)

Query: 110 GW-TVMLDYRTLKT-PSKRPLKLPTLGLAKAIGAEWDYQQTDGIRPFMMPLMKLACTALE 167
           GW  V +D R +K   S + L +P+  +A     E+  +QT  I   +MP+  +   AL 
Sbjct: 65  GWFAVTVDGRKVKAMKSSQVLAVPSEAMACCCAQEYA-EQTGYINQLLMPMSDICSGALH 123

Query: 168 RVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDPLLKWVESEF----- 222
             P      I++L+  F  D ++ RA       + +  +Q   I P++ W E  +     
Sbjct: 124 IAPQMLTPRIDYLLSFFQNDNLYFRA-------APIAAKQDAMIAPIIAWFERVYEMDVP 176

Query: 223 ---GFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRG 279
              G      +     K  D LI          + Y++ A+   A    SL++ + +F G
Sbjct: 177 RVVGIGDPHITPHATAKMRDALIAM------NMNPYQVLAMCVTAQFTSSLLLPLALFSG 230

Query: 280 KLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATV 324
            + +   + + R EE   + + GLV G HDI  AD   +I +  +
Sbjct: 231 VVDLPTTLAINRAEEQHSISEAGLVAGYHDIREADAVTKICACAM 275


>gi|453330664|dbj|GAC87410.1| putative ATP12 chaperone protein [Gluconobacter thailandicus NBRC
           3255]
          Length = 229

 Score = 61.2 bits (147), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 98/212 (46%), Gaps = 19/212 (8%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWD-YQQTDGIR 152
           KRF++ V+  E D    +   LD R ++ P    L L +  LA+AI AEW    + +   
Sbjct: 5   KRFWKSVTLGEQD--GLFRPELDGRPIRLPKGAVLALSSRPLAQAIVAEWSRIPENEAFT 62

Query: 153 PFMMPLMKLACTALERVPLTRPKIIE--HLMKKFNQDLVFCRAPADNDLTSGVHERQVQK 210
           P  +PL ++A T +ER+   RP + E    + +   D   C      DLT          
Sbjct: 63  PEQLPLTRIAGTMIERI---RPDLTEAREALLRHGLDDGLCYRKEQPDLT---------- 109

Query: 211 IDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSL 270
           ++ + +W+  E G +P V        Q    I  +E L+ + ++ ELAA+  +     SL
Sbjct: 110 VERIFEWLAKE-GIQPSVTDGLMPVTQSGDYITGLERLLTRQNEAELAALGVLTQTFGSL 168

Query: 271 VIAIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           ++A+ +    ++ EEA+ +   +E  Q+  WG
Sbjct: 169 LLALALVSDVIEQEEAVSVANADERKQLLVWG 200


>gi|50302687|ref|XP_451279.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49640410|emb|CAH02867.1| KLLA0A06259p [Kluyveromyces lactis]
          Length = 327

 Score = 61.2 bits (147), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 64/271 (23%), Positives = 115/271 (42%), Gaps = 45/271 (16%)

Query: 95  RFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLG--LAKAIGAEWDYQQTDGIR 152
           +F+E+VS  E  +    T+ LD + L+TP   PL LP     L+  +  EW    +  ++
Sbjct: 51  KFWEQVSLEETPEN--VTIKLDSKPLRTPLGNPLTLPQSRKLLSVMVLNEWSNLPSLSVK 108

Query: 153 PFMMPLMKLA--CTALER-------------VPLTRPKIIEHLMKKFNQDLVFCRAPADN 197
           P+++PL  L   C  LE+             +   R K+ E L++  + D +   +PA N
Sbjct: 109 PYVLPLTSLVSRCIDLEKANEDGVDPELVAKIGGNREKLTEGLLRYLDTDTLLVFSPA-N 167

Query: 198 DLTSGVHERQVQKIDPLLKWVES----------EFGFKPVVYSSFFG--GKQEDGLIKTV 245
           +    + + Q +   P++  VE           E   + ++ +   G  G  + G  + V
Sbjct: 168 EYEGALRKAQDELYLPIISGVEKFLSQINKDKKEVKLQ-ILDADLHGLRGNAQSGETREV 226

Query: 246 -ENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGK---------LQI--EEAIELIRLE 293
            +  +     ++LA  +       S +  + +   K         LQ+  E+      LE
Sbjct: 227 AKQYLDSLSVWDLAIFEKTVLTTKSFICGLLLLLNKSATVTNIPELQVSMEDIARAATLE 286

Query: 294 EDLQVDKWGLVEGGHDIDIADLRVQISSATV 324
              QV++WG VE  HD+D  D+R  I +A +
Sbjct: 287 TIYQVERWGEVEDTHDVDKRDVRRNIHAAAI 317


>gi|71660257|ref|XP_821846.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70887235|gb|EAN99995.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 392

 Score = 61.2 bits (147), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 62/273 (22%), Positives = 115/273 (42%), Gaps = 17/273 (6%)

Query: 61  ESIYIKGRKQETASS----SSSSVTMPMSFMTGSIVGKR-FYEKVSTREADDGNGW-TVM 114
           + +Y +  KQE   S      S   M +S    S    R F++ V+    D   GW TV+
Sbjct: 102 QELYDRLEKQEEEESRVLTEDSLYQMDVSMRDRSRAAVRVFWKDVNVGPLDGHEGWYTVL 161

Query: 115 LDYRTLKT-PSKRPLKLPTLGLAKAIGAEWDYQQTDGIRPFMMPLMKLACTALERVPLTR 173
           +D R +K   S   L +P   +A     E+  +Q+  +   +MP+  +   AL   P   
Sbjct: 162 VDGRKVKAFESTHVLAIPNEAMAYCCAQEYA-EQSGYLNKLLMPMTDMCSGALTVSPQMI 220

Query: 174 PKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDPLLKWVESEFGFK-PVVYSSF 232
              +++LM  +  D ++ RA       + + E Q + I P+  W    F  + P +    
Sbjct: 221 APRVDYLMSFYQNDNIYFRA-------APIAEEQDRVIGPIADWFSRAFNVEVPRIVGIG 273

Query: 233 FGGKQEDGLIKTVENLMKKT-DDYELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIR 291
                    +K  + L+  + + Y++ A+   A    SL++ + +F   + +  A+ +  
Sbjct: 274 HPHIPIGATLKVRDALLAMSMNPYQIVALCVAAQFTSSLLLPLAMFNSVVDLPTALSINS 333

Query: 292 LEEDLQVDKWGLVEGGHDIDIADLRVQISSATV 324
            EE       G ++G HDI  AD+  ++ +  V
Sbjct: 334 SEERHNTSTEGAIQGYHDIRDADVVTKLCACAV 366


>gi|307946326|ref|ZP_07661661.1| ATP12 chaperone protein [Roseibium sp. TrichSKD4]
 gi|307769990|gb|EFO29216.1| ATP12 chaperone protein [Roseibium sp. TrichSKD4]
          Length = 257

 Score = 61.2 bits (147), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 103/209 (49%), Gaps = 7/209 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+K    + D   G+ + LD R +KTP+K  L LPTL LA+A+ AEW+ Q+ + I P
Sbjct: 30  KRFYKKAEAAKVD--GGFAIHLDGRAVKTPAKVTLLLPTLTLAEAVAAEWEAQEKE-IDP 86

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MPL +++ +A + V      + + + +    D +  RA     L +    RQ +  DP
Sbjct: 87  GKMPLTRISNSAQDAVTSKFADVADEITRFVGNDALCYRADGPETLVT----RQRELWDP 142

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           +L W     G   V+       +Q + L+ +    +      +L+A+        S V+A
Sbjct: 143 VLNWAGDALGGVFVLIEGIIHKEQPEALLSSFRTRLDALSPLQLSALHTATTLTGSAVLA 202

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
             +F  ++  +EA +   +EED  +++WG
Sbjct: 203 YALFEKRVTADEAWKAAFVEEDWNIERWG 231


>gi|256084786|ref|XP_002578607.1| hypothetical protein [Schistosoma mansoni]
          Length = 183

 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 76/158 (48%), Gaps = 14/158 (8%)

Query: 176 IIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKI--DPLLKWVESEFGFKPVVYSSFF 233
           ++  +M+  + D +  R    +DL       +VQ +  DP++ WV   +  KP++  S  
Sbjct: 20  LVNTIMQYADTDTICFRCQEPDDLV------KVQSLSWDPIINWVNKHYQIKPIITDSMT 73

Query: 234 GGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSL---VIAIGIFRGKLQIEEAIELI 290
              +   L K  E L +  + Y +  +  I +   +L    + + +  G      A+EL 
Sbjct: 74  SLAKLSPLDK--EKLTRYFNSYNIWGLTGIKSCVENLKSVYLTLAMLDGYCSAARAVELS 131

Query: 291 RLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGL 328
           ++E   QV++WG V   HD++ ADL  ++S+A +FL L
Sbjct: 132 QIEMLFQVNRWGDVPSYHDVENADLNARVSAA-LFLAL 168


>gi|407846835|gb|EKG02803.1| hypothetical protein TCSYLVIO_006163 [Trypanosoma cruzi]
          Length = 392

 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 62/273 (22%), Positives = 115/273 (42%), Gaps = 17/273 (6%)

Query: 61  ESIYIKGRKQETASS----SSSSVTMPMSFMTGSIVGKR-FYEKVSTREADDGNGW-TVM 114
           + +Y +  KQE   S      S   M +S    S    R F++ V+    D   GW TV+
Sbjct: 102 QELYDRLEKQEEEESRVLTEDSLYQMDVSMRDRSRAAVRVFWKDVNVGPLDGHEGWYTVL 161

Query: 115 LDYRTLKT-PSKRPLKLPTLGLAKAIGAEWDYQQTDGIRPFMMPLMKLACTALERVPLTR 173
           +D R +K   S   L +P   +A     E+  +Q+  +   +MP+  +   AL   P   
Sbjct: 162 VDGRKVKAFESTHVLAIPNEAMAYCCAQEYA-EQSGYLNKLLMPMTDMCSGALTVSPQMI 220

Query: 174 PKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDPLLKWVESEFGFK-PVVYSSF 232
              +++LM  +  D ++ RA       + + E Q + I P+  W    F  + P +    
Sbjct: 221 APRVDYLMSFYQNDNIYFRA-------APIAEEQDRVIGPIADWFSRAFNVEVPRIVGIG 273

Query: 233 FGGKQEDGLIKTVENLMKKT-DDYELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIR 291
                    +K  + L+  + + Y++ A+   A    SL++ + +F   + +  A+ +  
Sbjct: 274 HPHIPIGSTLKVRDALLAMSMNPYQIVALCVAAQFTSSLLLPLAMFNSVVDLPTALSINS 333

Query: 292 LEEDLQVDKWGLVEGGHDIDIADLRVQISSATV 324
            EE       G ++G HDI  AD+  ++ +  V
Sbjct: 334 SEERHNTSTEGAIQGYHDIRDADVVTKLCACAV 366


>gi|103487585|ref|YP_617146.1| ATP12 ATPase [Sphingopyxis alaskensis RB2256]
 gi|98977662|gb|ABF53813.1| ATP12 ATPase [Sphingopyxis alaskensis RB2256]
          Length = 229

 Score = 60.8 bits (146), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 98/235 (41%), Gaps = 8/235 (3%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRF+++V+     +G GW++ LD R ++TP +  L + +  LA+AI AEWD    + I P
Sbjct: 2   KRFWKEVTV--VAEGVGWSIALDGRPVRTPQRATLMVASAALAEAIAAEWD-DVGETIDP 58

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MP+  LA  A++            +      DL+  R   D  L       Q    +P
Sbjct: 59  AAMPMTGLANAAIDLAAPDLTAFAAPIAAYATSDLLCYRDARDATL----QAEQAAAWNP 114

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           LL W E  +G +  +        Q    +  + +     D + + A+  +     SLV  
Sbjct: 115 LLAWAEERYGVEFALTQGVIPVDQPAATVAALRDAAFAQDQWRITALTPLVTIGGSLVAG 174

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGL 328
           + +       +   + + L+E  Q  +WG  +G      A  +    +A  FLGL
Sbjct: 175 LALIENAFDADALWQAVSLDELYQERRWG-ADGEAQKARAAKQRDWDNAARFLGL 228


>gi|149244532|ref|XP_001526809.1| hypothetical protein LELG_01637 [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146449203|gb|EDK43459.1| hypothetical protein LELG_01637 [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 355

 Score = 60.8 bits (146), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 69/279 (24%), Positives = 104/279 (37%), Gaps = 63/279 (22%)

Query: 93  GKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPT--LGLAKAIGAEWDYQQTDG 150
           G++F++K       + N + + LD +TL+TP   PL +P     LA  I  EW       
Sbjct: 64  GRKFWDKCDVYLNPNTNLYEIQLDGKTLRTPLGFPLTVPKNKKQLAYLISHEWTNLPNIS 123

Query: 151 IRPFMMPLMKLACTALERVPLTRPKIIEH-----------------LMKKFNQDLVFCRA 193
           ++   +PL  LA  A++   L R +I E                  L++  N D     A
Sbjct: 124 VKSSALPLTGLAARAIDL--LKRNEIDEETNEQVKEVIAIKDLKESLLRYLNTDTCLIFA 181

Query: 194 PADNDLTSGVHERQVQKIDPLLKWVE---SEFGFKP--------VVYSSF-------FGG 235
               D    + +RQ +   PL+K  +   +EFG K         +V  +         G 
Sbjct: 182 -GKKDCDGKLRKRQEELYRPLIKEFQEFLTEFGHKSGRLPKNDKIVLQTLDCETDGLRGN 240

Query: 236 KQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGKL-------------- 281
            Q       V   M + D YEL A++       S +    I R  +              
Sbjct: 241 YQTQSTQDVVIEWMDQLDIYELIALEKSILTTKSFLCGASILRSNVSDPERMHAVFQVNK 300

Query: 282 ---------QIEEAIELIRLEEDLQVDKWGLVEGGHDID 311
                     +EE IE+  LE  LQ  +WG VE  HD+D
Sbjct: 301 DTQDKFWYKNVEEIIEMGNLETILQTGEWGEVEDTHDVD 339


>gi|358331495|dbj|GAA50290.1| ATP synthase mitochondrial F1 complex assembly factor 2 [Clonorchis
           sinensis]
          Length = 600

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 96/216 (44%), Gaps = 16/216 (7%)

Query: 85  SFMTGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWD 144
           +F +  +V    +  + + E D    + V LD R L+TP    L +P   LA A+  EWD
Sbjct: 295 TFTSFQVVANVVFRNLFSGEQDLV--YEVQLDKRKLRTPGGNTLLIPNEALALAVAVEWD 352

Query: 145 YQQTDGIRPFMMPLMKLACTALERVPLTRP-KIIEHLMKKFNQDLVFCRAPADNDLTSGV 203
            Q+ D I+   M L+      L+  P  +P  +++ +M+  + D +  R    +DL   V
Sbjct: 353 SQK-DTIKRHSMHLV-----LLDWRPEIKPLDVVQSIMQYADTDTICFRVQEPDDL---V 403

Query: 204 HERQVQKIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTV--ENLMKKTDDYELAAID 261
           H  Q    DP+L WV   +  +P + +S  G        + V  +NL+  T  + L    
Sbjct: 404 H-LQNASWDPVLHWVAEHYRIQPYLTNSLTGTPVMSSADRDVLKQNLLGNT-RWALIGTQ 461

Query: 262 AIAAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQ 297
           +      S+ + + +  G     +A EL +LE+  Q
Sbjct: 462 SCVENLKSVFLTLAVLDGFCSAVKAAELSQLEQLFQ 497


>gi|315044001|ref|XP_003171376.1| hypothetical protein MGYG_09102 [Arthroderma gypseum CBS 118893]
 gi|311343719|gb|EFR02922.1| hypothetical protein MGYG_09102 [Arthroderma gypseum CBS 118893]
          Length = 362

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 69/299 (23%), Positives = 115/299 (38%), Gaps = 60/299 (20%)

Query: 88  TGSIVGKRFYEKVSTREADDGN---------------------GWTVMLDYRTLKTPSKR 126
           T S + KRF++ V  +EA   +                     G  + LD R ++TP K 
Sbjct: 59  TASPLRKRFWKDVHVKEAAGRHPTDVLFLSSLIDINMCFTLIGGHQIYLDSRPVRTPEKN 118

Query: 127 PLKLPTL--GLAKAIGAEWDYQQT--DGIRPFMMPLMKL-------ACTALERVPLTRPK 175
            L +P+    LA AI  EWD  +T     +  ++P+  +       A    + V   R  
Sbjct: 119 ILTVPSSKPHLAHAIALEWDLLKTAQHATKYHLIPMTSITGRAEDIAAEDAKGVTTIRDD 178

Query: 176 IIEHLMKKFNQDLVFCRAPADNDLTSG--------VHERQVQKIDPLLKWVESEFG---- 223
           I   +++    D +   AP       G        + E+Q++  +P++  + S       
Sbjct: 179 ITRVMLRYLETDTLLSWAPEREPDYVGRSEEKRETLREKQIKAAEPIISALVSAVWPGVE 238

Query: 224 FKPVV-YSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGI------ 276
            KP +  +S     Q    I  +   +     Y+LA ++    A  SL++   +      
Sbjct: 239 LKPTLDANSIMPLPQPQQTIDFIRGWLSSLSPYDLAGVERAGIATKSLLVGTRVVIEWSE 298

Query: 277 -FRG--------KLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFL 326
            FR            IEEA     LE   Q++ WG VE  HD++  DLR Q+ S  + +
Sbjct: 299 NFRHIRPNGASRTFGIEEAAYASSLEVRWQIENWGEVEDTHDVEREDLRRQLGSVILLV 357


>gi|354543871|emb|CCE40593.1| hypothetical protein CPAR2_106280 [Candida parapsilosis]
          Length = 348

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 68/294 (23%), Positives = 107/294 (36%), Gaps = 59/294 (20%)

Query: 90  SIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLP--TLGLAKAIGAEWDYQQ 147
           S  G RF++K       +   + V LD +TL+TP   PL LP     LA  I  EW +  
Sbjct: 54  SKTGNRFWDKGHVFHNKNTGRYEVQLDGKTLRTPLGLPLTLPENKKQLAYLIAHEWTHLP 113

Query: 148 TDGIRPFMMPLMKLACTALERVPLTRPKIIEH---------------LMKKFNQDLVFCR 192
              ++   +PL  LA  A++    +  K IE                ++K  + D     
Sbjct: 114 KISLKSSALPLTGLAARAIDLGSKSNEKGIEDEGGDGMLPLEDLKLSMLKYLDTDTCLIF 173

Query: 193 APADNDLTSGVHERQVQKIDPLLKWVES------------------EFGFKPVVYSSFFG 234
           A A  D    + ++Q +   PL++                      E  F         G
Sbjct: 174 AGA-KDCDGKLRKKQEELYRPLIEEYNDFFTQYGVNKNLLKENERIELKFLDCEKDGLRG 232

Query: 235 GKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGKLQ------------ 282
            KQ     + V + + + D +E  A++       S + A+ I R  +             
Sbjct: 233 NKQSLKTQQVVIDWLDQLDIFEFVALEKSILTTKSFLCAVSILRSNVSDESRMKDVFQLN 292

Query: 283 -----------IEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVF 325
                      +EE IEL  LE  LQ  +WG VE  HD++  D    ++SA + 
Sbjct: 293 RDSNDLFWYKTVEEIIELGNLETILQTGEWGEVEDTHDVEQRDWLRSLTSAALL 346


>gi|241948329|ref|XP_002416887.1| mitochondrial molecular chaperone, putative [Candida dubliniensis
           CD36]
 gi|223640225|emb|CAX44474.1| mitochondrial molecular chaperone, putative [Candida dubliniensis
           CD36]
          Length = 356

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 71/291 (24%), Positives = 112/291 (38%), Gaps = 58/291 (19%)

Query: 90  SIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPT--LGLAKAIGAEWDYQQ 147
           S +GKRF++    +       + + LD +TL+TP   PL+LP     LA  I  EW +  
Sbjct: 63  SKIGKRFWKNGQVKFNKQTEKYEIQLDGKTLRTPLGYPLELPKNKKQLAYLIAHEWTHLP 122

Query: 148 TDGIRPFMMPLMKLACTA--LERVPLTRPKIIE------HLMKKFNQDLVFCRAPADNDL 199
              ++   +PL  L   A  L      + K++E       ++K  + D   C   A N  
Sbjct: 123 DIKVKSSTLPLTSLVTRAIDLSNQENVKEKMLELQDIKLQMLKYLDTDT--CLIFATNKE 180

Query: 200 TSG-VHERQVQKIDPLLKWVESEF---GFK----PVVYS-----------SFFGGKQEDG 240
             G + +RQ +   PL+K     F   G K    P+  S              G KQ   
Sbjct: 181 CDGKLRKRQEEIYRPLIKEFNEFFTMYGHKKNLIPINQSIELKYLDCEIDGLKGNKQSKI 240

Query: 241 LIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGKLQ------------------ 282
           + + V N + +   Y+L +++       S +  I + R  +                   
Sbjct: 241 IQEIVLNWLNQLPIYDLISLEKTILITKSFLCGIILLRSNVNNEFFLKNLYQFNKNSINN 300

Query: 283 ---------IEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATV 324
                    +EE IEL  LE   Q  +WG VE  HD+D  D    ++SA +
Sbjct: 301 NKKDYYYKSLEELIELGNLETIYQTKQWGEVEDTHDVDKLDWLRNLASAAL 351


>gi|407407521|gb|EKF31294.1| hypothetical protein MOQ_004873 [Trypanosoma cruzi marinkellei]
          Length = 392

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 61/273 (22%), Positives = 116/273 (42%), Gaps = 17/273 (6%)

Query: 61  ESIYIKGRKQETASS----SSSSVTMPMSFMTGSIVGKR-FYEKVSTREADDGNGW-TVM 114
           + +Y +  KQE   S      S   M +S    S    R F++ V+    D   GW TV+
Sbjct: 102 QELYDRLEKQEEEESRVLTEDSLYQMDVSMRDRSRAAVRVFWKDVNVSPLDGHEGWYTVL 161

Query: 115 LDYRTLKT-PSKRPLKLPTLGLAKAIGAEWDYQQTDGIRPFMMPLMKLACTALERVPLTR 173
           +D R +K   S   L +P   +A     E+  +Q+  +   +MP+  +   AL   P   
Sbjct: 162 VDGRKVKAFESTHVLAIPNEAMAYCCAQEYA-EQSGYLNKLLMPMTDMCSGALTVSPQMI 220

Query: 174 PKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDPLLKWVESEFGFK-PVVYSSF 232
              +++LM  +  D ++ RA       + +   Q + I P+  W    F  + P +    
Sbjct: 221 APRVDYLMSFYQNDNMYFRA-------APIAAEQDRVIGPIADWFSRVFNVEVPRIVGIG 273

Query: 233 FGGKQEDGLIKTVENLMKKT-DDYELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIR 291
                    +K  + L+  + + Y++ A+   A    SL++++ +F   + +  A+ +  
Sbjct: 274 HPHIPIGSTLKVRDALLAMSMNPYQIVALCVAAQFTSSLLLSLAMFNSVVDLPTALSINS 333

Query: 292 LEEDLQVDKWGLVEGGHDIDIADLRVQISSATV 324
            EE       G+++G HDI  AD+  ++ +  V
Sbjct: 334 SEERHNTSTEGVIQGYHDIRDADVVTKLCACAV 366


>gi|448104393|ref|XP_004200261.1| Piso0_002840 [Millerozyma farinosa CBS 7064]
 gi|359381683|emb|CCE82142.1| Piso0_002840 [Millerozyma farinosa CBS 7064]
          Length = 361

 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 64/289 (22%), Positives = 112/289 (38%), Gaps = 60/289 (20%)

Query: 95  RFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPT--LGLAKAIGAEWDYQQTDGIR 152
           +F++KV T   +D N + + LD RTL+TP    L +P     LA  I  EW       I+
Sbjct: 71  KFWDKVDTVFVEDKNHYEIKLDSRTLRTPLGFSLTVPAEKKQLAYLIQHEWSTLPELKIK 130

Query: 153 PFMMPLMKLACTALERVPLTR-----PKIIE----------HLMKKFNQDLVFCRAPADN 197
              MPL  LAC +++    T      P++I           +L++ F+ D        D 
Sbjct: 131 LNSMPLSSLACRSIDLHNTTNNESVDPELITKVGKVDDIKLNLLRYFDTDTCLIFTTKD- 189

Query: 198 DLTSGVHERQVQKIDPLLKWVESEFGF------------KPVVYSSF------FGGKQED 239
           +    +  +Q +   PL+   E+ F                + +S+         G ++ 
Sbjct: 190 EYEGKLRAKQDELYLPLIAEFENYFTHFAKQNHHLTHDSPQINFSTLDCETDGLRGNKQS 249

Query: 240 GLIKTVE-NLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGKLQ---------------- 282
            L++ +  + M +   +EL A++     A S +    + R                    
Sbjct: 250 ILVQAIAMDWMSQLSMFELVALEKAVLTAKSFLCGASLLRSNCSNPDRMHSFFQMNKPNE 309

Query: 283 -------IEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATV 324
                  + + +EL  LE   Q ++WG VE  HD+D  D    ++SA +
Sbjct: 310 DAHFHKTVHDIVELGNLETIFQTNEWGEVEDTHDVDKVDWLRNLTSAAL 358


>gi|393721174|ref|ZP_10341101.1| ATP12 ATPase [Sphingomonas echinoides ATCC 14820]
          Length = 238

 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 96/209 (45%), Gaps = 10/209 (4%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRF+  V+     D N   V LD + ++TP + PL LPT  LA+A+  EW   + + I P
Sbjct: 2   KRFWTHVTL----DHNR-AVQLDGKPVRTPGRVPLALPTAALAEAVAEEWRAVKGE-INP 55

Query: 154 FMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDP 213
             MPL  LA  A++RV          L      DL+  RA A  DL +    RQ    DP
Sbjct: 56  LAMPLTGLANAAIDRVGPDPALFARGLATYAESDLLCYRADAPEDLVA----RQAAAWDP 111

Query: 214 LLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIA 273
           LL W  + +  +  V +      Q    +  +   +   + + LAA+  I     SL+ A
Sbjct: 112 LLDWARARYDVQIEVATGILHRAQPVATLTRLGTAIAARNAFALAALSPIVTIGGSLIAA 171

Query: 274 IGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           + +  G    E+  + + L+ED Q ++WG
Sbjct: 172 LALAEGAASAEQTWDAVTLDEDYQAERWG 200


>gi|406989145|gb|EKE08956.1| ATP12 ATPase [uncultured bacterium]
          Length = 215

 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 78/192 (40%), Gaps = 14/192 (7%)

Query: 120 LKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRPFMMPLMKLACTALERVPLTRPKIIEH 179
           LKTP   P ++PTL LA+AI  EW    +        PL  LA T L+RV   R   I +
Sbjct: 11  LKTPEGHPFEVPTLALARAIEEEWKKDPSPHYS--RKPLTSLAATTLDRVAEARESYISY 68

Query: 180 LMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDPLLKWVESEFGFKPVVYSSF----FGG 235
           + +   +D++   AP    L     + Q ++  PL+  +    G K    +S      G 
Sbjct: 69  IAESVVRDVILFWAPEPPTLM----KLQKKEWLPLITQINEALGLKLKATTSLSIPALGL 124

Query: 236 KQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIRLEED 295
            +E+     V   +     ++L+    +     S  I+  +F  +L  E A  L  L E 
Sbjct: 125 HEEEK----VRGFLYHLTTFQLSGFVHLLTLTSSFAISYLLFNDELTAERAWNLAHLHEQ 180

Query: 296 LQVDKWGLVEGG 307
            Q   WG  E  
Sbjct: 181 EQRRIWGQDEAA 192


>gi|150864752|ref|XP_001383719.2| F1-ATP synthase assembly protein [Scheffersomyces stipitis CBS
           6054]
 gi|149386008|gb|ABN65690.2| F1-ATP synthase assembly protein, partial [Scheffersomyces stipitis
           CBS 6054]
          Length = 301

 Score = 57.8 bits (138), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 69/272 (25%), Positives = 106/272 (38%), Gaps = 41/272 (15%)

Query: 95  RFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLG--LAKAIGAEWDYQQTDGIR 152
           +F+EKV T      + + V LD +TLKTP   PL LP+    LA  I  EW       I+
Sbjct: 28  KFWEKVDTHYDATKDLYEVQLDGKTLKTPLGFPLALPSSKKQLAYLIANEWANLPDLKIK 87

Query: 153 PFMMPLMKLACTALERVPLTRPKI----IEHLMK-------KFNQ----DLVFCRAPADN 197
             MMPL  +A  +++ + +   +      E + K       KFN     D   C      
Sbjct: 88  TNMMPLTSIAARSIDLINIHEKEAGSEKNEMIAKVGDLDDIKFNMLRYLDTDTCLIFTTR 147

Query: 198 DLTSG-VHERQVQKIDPLL-------------KWVESEFGFKPVVYSSFFGGKQEDGLIK 243
           D   G + +RQ +   PL+             K  E +  +         G KQ      
Sbjct: 148 DEYRGTLRKRQDELYLPLIAEFEDFFTIFAHNKEAEIKLEYLDCETDGIRGNKQSITTQN 207

Query: 244 TVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRG----------KLQIEEAIELIRLE 293
            V   +     Y+L A++     + S +  + + R           K  +EE +EL  +E
Sbjct: 208 VVLQWLHLLPIYDLIALEKAILTSKSFLCGVTLLRSNAAQSDPKLMKETVEEIVELGNME 267

Query: 294 EDLQVDKWGLVEGGHDIDIADLRVQISSATVF 325
              Q  +WG VE  HD+D  D    ++SA + 
Sbjct: 268 TIFQTREWGEVEDTHDVDKVDWLRNLTSAALL 299


>gi|401838927|gb|EJT42336.1| ATP12-like protein [Saccharomyces kudriavzevii IFO 1802]
          Length = 325

 Score = 57.8 bits (138), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 60/274 (21%), Positives = 106/274 (38%), Gaps = 40/274 (14%)

Query: 90  SIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLG--LAKAIGAEWDYQQ 147
           S   ++F+EKVS     +     + LD +T+KTP    + +      LA  +  EW    
Sbjct: 48  SKTSQKFWEKVSLNRDIENGKIALQLDGKTIKTPLGNGIIIDDTRSLLAYLLKLEWSCLP 107

Query: 148 TDGIRPFMMPLMKLA--CTALERV--PLTRPKII-----------EHLMKKFNQDLVFCR 192
           +  I+   +PL  L   C  L+    P   P++I             L++  + D +   
Sbjct: 108 SLSIKTHSLPLTSLVARCIDLQMTNKPGCSPQLIAKIGGTSDVIRNQLLRYLDTDTLLVF 167

Query: 193 APADNDLTSGVHERQVQKIDPLLKWVE---SEFGFKPVVYSSFF--------GGKQEDGL 241
           +P  ++    +   Q +   PL+K +E   S F     ++            G +Q D +
Sbjct: 168 SPM-SEFEGNLRIAQNESYQPLIKGMEEFLSRFSSNSNIHLQVLDADIHGLRGNRQSDIV 226

Query: 242 IKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGK-----------LQIEEAIELI 290
                  M     ++LA ++       S +  + +   K             +E  I   
Sbjct: 227 RNAAMKYMDSLSLWDLAILEKAVLTTKSFICGVLLLENKKDTNQLPPTLKTNMENIIRAA 286

Query: 291 RLEEDLQVDKWGLVEGGHDIDIADLRVQISSATV 324
            LE   Q++KWG VE  HD+D  D+R +I +A +
Sbjct: 287 TLETLFQIEKWGEVEDTHDVDKRDIRRKIHTAAI 320


>gi|50288517|ref|XP_446688.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49525996|emb|CAG59615.1| unnamed protein product [Candida glabrata]
          Length = 323

 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 67/280 (23%), Positives = 107/280 (38%), Gaps = 54/280 (19%)

Query: 90  SIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKL----PTLGLAKAIGAEWDY 145
           S  G++F+++V       G+  TV LD + L+TP    L +      LGL   +  EW  
Sbjct: 48  SKTGQKFWDQVGLDFG--GDKITVQLDSKPLRTPLGNNLAIDHDRKVLGLM--LKKEWSN 103

Query: 146 QQTDGIRPFMMPLMKLA--CTALE-------------RVPLTRPKIIEHLMKKFNQDLVF 190
            Q    + F +PL  L   C  LE             ++      I   L++  + D + 
Sbjct: 104 LQEVASKKFSLPLTSLVSRCIDLETTSNADCDPEAVAKIGGDTTVIKNQLLRYMDTDTLL 163

Query: 191 CRAPADNDLTSGVHERQVQKIDPLLKWVESEFGFKPVVYSS----------------FFG 234
             +PA  +    + E Q +   P++K +E   G     YSS                  G
Sbjct: 164 VFSPA-KEFEGALREEQDKLYLPIIKKIEEFLG----QYSSSDKQLTLQILDADVHGLRG 218

Query: 235 GKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGKLQ----------IE 284
             Q   +     N M     ++LA  +       S +  I +     +          ++
Sbjct: 219 NVQSQEVKDAAMNYMDSLSPWDLAVFEKTVLTTKSFICGILLMESMTKKSTHKELVKSLD 278

Query: 285 EAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATV 324
           E I L  LE   QV++WG VE  HD+D  D+  +ISSA +
Sbjct: 279 EIIRLATLETIFQVERWGEVEDTHDVDKRDIHRKISSAAI 318


>gi|50418327|ref|XP_457773.1| DEHA2C02134p [Debaryomyces hansenii CBS767]
 gi|49653439|emb|CAG85809.1| DEHA2C02134p [Debaryomyces hansenii CBS767]
          Length = 365

 Score = 57.4 bits (137), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 65/291 (22%), Positives = 102/291 (35%), Gaps = 61/291 (20%)

Query: 95  RFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPT--LGLAKAIGAEWDYQQTDGIR 152
           +F+EKV      D N + V LD +TLKTP   PL LP     LA  +  EW       ++
Sbjct: 74  KFWEKVDAVHNKDLNQYEVQLDGKTLKTPLGFPLSLPAEKKQLAHLVAHEWANLPDLKVK 133

Query: 153 PFMMPLMKLACTALERVPLTRPKIIE---------------HLMKKFNQDLVFCRAPADN 197
              +PL  L+  A++   +   + I+               +L++  + D        D 
Sbjct: 134 INALPLTSLSSRAIDLYNVHNNENIDGEMISKVGNVDDIKVNLLRYLDTDTCLIFTILD- 192

Query: 198 DLTSGVHERQVQKIDPLLKWVESEF--------------------GFKPVVYSSFFGGKQ 237
           +    +  +Q +   PL+K  E  F                     F         G +Q
Sbjct: 193 EYEGQLRSKQDELYFPLIKEFEDYFTAYAKRKGNLLKNDNERVTLNFLDCETDGLSGNRQ 252

Query: 238 EDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGKLQ--------------- 282
                  V + M     YEL A++     A S +    + R                   
Sbjct: 253 SITTQNIVMSWMNDLSMYELVALERAILTAKSFLCGASLLRSNCSNETRMKELYQVNKSS 312

Query: 283 --------IEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVF 325
                   +EE +EL  LE   Q ++WG VE  HD+D  D    +SS+ + 
Sbjct: 313 PADHYHKTVEELVELGNLEIIFQTEEWGEVEDTHDVDKVDWLRHLSSSALL 363


>gi|366998093|ref|XP_003683783.1| hypothetical protein TPHA_0A02670 [Tetrapisispora phaffii CBS 4417]
 gi|357522078|emb|CCE61349.1| hypothetical protein TPHA_0A02670 [Tetrapisispora phaffii CBS 4417]
          Length = 326

 Score = 57.4 bits (137), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 59/266 (22%), Positives = 108/266 (40%), Gaps = 37/266 (13%)

Query: 95  RFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLG--LAKAIGAEWDYQQTDGIR 152
           +F++KVS +     N   + LD RT+ TP    L + +    LA  +  EW    +  IR
Sbjct: 57  KFWDKVSIKNDLINNNILIQLDGRTINTPLGNKLAVDSSRKMLAYLLMNEWKNLPSLSIR 116

Query: 153 PFMMPLMKLA--CTALERVPL------------TRPKIIEHLMKKFNQDLVFCRAPADND 198
            + +PL  L   C  LE++ L               K+I   ++  + D +   +P   +
Sbjct: 117 QYSLPLTSLVSRCIDLEKLHLEGDADAIEKYNGNLEKMISDTLRYLDTDTLLIFSPR-KE 175

Query: 199 LTSGVHERQVQKIDPLLKWVE------SEFGFKPVVYSS----FFGGKQEDGLIKTVENL 248
               + E Q +   P+++ +E      S+   K  V  S      G +Q+    +   N 
Sbjct: 176 FEGKLREEQDKLYLPIIEQIERFLSKLSKKSIKLNVLDSDLHGLRGNQQDKDTREAAANY 235

Query: 249 MKKTDDYELAAIDAIAAAAHSLVIAIGIFRGKLQ----------IEEAIELIRLEEDLQV 298
           ++    ++LA  + +     S +  I +   K             E+ I    LE   Q 
Sbjct: 236 LRSLSYWDLAIFEKVVLTTKSFICGILVILNKTNGSSELGISHTTEDIIRYSTLETIFQT 295

Query: 299 DKWGLVEGGHDIDIADLRVQISSATV 324
           ++WG VE  HD++  D+   I++A++
Sbjct: 296 ERWGEVEDTHDVNKRDIFRNITAASI 321


>gi|357030715|ref|ZP_09092659.1| hypothetical protein GMO_03590 [Gluconobacter morbifer G707]
 gi|356415409|gb|EHH69052.1| hypothetical protein GMO_03590 [Gluconobacter morbifer G707]
          Length = 226

 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 30/217 (13%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWD-YQQTDGIR 152
           KRF++ VS  EAD    +  +LD R ++ P    L +PT  LA+ I AEW    +     
Sbjct: 3   KRFWKTVSVEEAD--GRFQPVLDGRPIRLPQGHVLSVPTRALAQGIAAEWGRIAEGASFT 60

Query: 153 PFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKID 212
           P  +PL ++A T +ER+    P      + +   D   C   A + +T           D
Sbjct: 61  PDSLPLTRIAGTMVERIS-PDPAAARQALLELGVDDGLCYRTASSPVT-----------D 108

Query: 213 PLLKWVESEF-------GFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAA 265
            +  W++ +        G  PV  S F+        +  +  L+ + DD  LAA+  +A 
Sbjct: 109 RVFDWLKGKEIFPNVTDGLMPVAQSGFY--------MAGLRQLLARQDDVGLAALGVLAP 160

Query: 266 AAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           A  SL++A+ +  G +   +A+ L   +E+ Q+  WG
Sbjct: 161 ALGSLLLALALVAGVVSEGDAVSLANADEEKQLTVWG 197


>gi|367021480|ref|XP_003660025.1| hypothetical protein MYCTH_2297787 [Myceliophthora thermophila ATCC
           42464]
 gi|347007292|gb|AEO54780.1| hypothetical protein MYCTH_2297787 [Myceliophthora thermophila ATCC
           42464]
          Length = 303

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/262 (22%), Positives = 104/262 (39%), Gaps = 48/262 (18%)

Query: 113 VMLDYRTLKTPS-KRPLKLPTL--GLAKAIGAEWD--YQQTDGIRPFMMPLMKLACTALE 167
           + LD R L+ P+ K  ++LP     LA A+  EWD         +  ++PL  L C AL+
Sbjct: 27  IHLDSRPLRHPTTKAVIRLPASKPDLAHALAIEWDGLTSAQQATKQHLIPLTSLTCRALD 86

Query: 168 RV--PLTRPKIIEHLMKKFNQDLVFCRAP------ADNDLTSGVHERQVQKIDPLLKWVE 219
               P  R  I   +++  + D + C +P        +D ++ +   Q +     ++++ 
Sbjct: 87  IAADPSLRAGIAATVLRYLDTDSLLCFSPPPEEEEGRDDGSASLRAAQERAYASTVRYLT 146

Query: 220 SEF----GFKPVV-YSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAI 274
           +         PV+   S    +Q  G  + V+  +     +ELA ++    A  SL+ A 
Sbjct: 147 ARLWPGISIVPVLDGDSILPRQQPPGTREVVQGWILALSPFELAGLERATLAGKSLLAAA 206

Query: 275 GIFRG------------------------------KLQIEEAIELIRLEEDLQVDKWGLV 304
            +                                 +  +EEA   + LE D Q  +WG V
Sbjct: 207 RLVAEWSEEGAGARESRSPPAAAAEQQQPGETSDERFGVEEAARAVSLEVDWQTQQWGEV 266

Query: 305 EGGHDIDIADLRVQISSATVFL 326
           +  HD+D  DLR Q+ S  + +
Sbjct: 267 DDTHDVDREDLRRQLGSVVLLV 288


>gi|365760071|gb|EHN01818.1| Atp12p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
          Length = 325

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/274 (21%), Positives = 106/274 (38%), Gaps = 40/274 (14%)

Query: 90  SIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLG--LAKAIGAEWDYQQ 147
           S   ++F+EKVS     +     + LD +T+KTP    + +      LA  +  EW    
Sbjct: 48  SKTSQKFWEKVSLNRDIENGKIALQLDGKTIKTPLGNGIIIDDTRSLLAYLLKLEWSCLP 107

Query: 148 TDGIRPFMMPLMKLA--CTALERV--PLTRPKII-----------EHLMKKFNQDLVFCR 192
           +  I+   +PL  L   C  L+    P   P++I             L++  + D +   
Sbjct: 108 SLSIKTHSLPLTSLVARCIDLQMTNKPGCSPQLIAKIGGTSDVIRNQLLRYLDTDTLLVF 167

Query: 193 APADNDLTSGVHERQVQKIDPLLKWVE---SEFGFKPVVYSSFF--------GGKQEDGL 241
           +P  ++    +   Q +   PL+K +E   S F     ++            G +Q D +
Sbjct: 168 SPM-SEFEGNLRIAQNESYLPLIKGMEEFLSRFSSNSNIHLQVLDADIHGLRGNRQSDIV 226

Query: 242 IKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGK-----------LQIEEAIELI 290
                  M     ++LA ++       S +  + +   K             +E  I   
Sbjct: 227 RNAAMKYMDSLSLWDLAILEKAVLTTKSFICGVLLLENKKDTNQLPPTLKTNMENIIRAA 286

Query: 291 RLEEDLQVDKWGLVEGGHDIDIADLRVQISSATV 324
            LE   Q++KWG VE  HD+D  D+R +I +A +
Sbjct: 287 TLETLFQIEKWGEVEDTHDVDKRDIRRKIHTAAI 320


>gi|365982958|ref|XP_003668312.1| hypothetical protein NDAI_0B00350 [Naumovozyma dairenensis CBS 421]
 gi|343767079|emb|CCD23069.1| hypothetical protein NDAI_0B00350 [Naumovozyma dairenensis CBS 421]
          Length = 334

 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 69/284 (24%), Positives = 109/284 (38%), Gaps = 59/284 (20%)

Query: 93  GKRFYEKVSTREADDGNGWTVMLDYRTLKTPS--------KRPLKLPTLGLAKAIGAEWD 144
           G RF+E V+  +    N   + LD + +KTPS         RPL      LA  +  EW 
Sbjct: 54  GVRFWETVTLDDKCIENKILIKLDSKPIKTPSGFDLSVDKNRPL------LAYLLRQEWA 107

Query: 145 YQQTDGIRPF-MMPLMKLA--CTALE------------RVPLTRPKIIEHLMKKFNQDLV 189
              T  ++    +PL  L   C  LE            ++   R  I E L++  + D +
Sbjct: 108 TLPTVSMKNTDHLPLTSLVFRCIDLETAVAKGDKDLITKINADRSLINEQLLRYLDTDTL 167

Query: 190 FCRAPADNDLTSGVHERQVQKIDPLLKWVESEF-GFKPVVYSS-------------FFGG 235
              +P  N+    +  +Q +   P++  +E    GFK    S                G 
Sbjct: 168 LVFSPR-NEFEGALRSKQDELYLPIIAKIERFLNGFKSSAKSCDIKLRTLDGETDGIRGN 226

Query: 236 KQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGK-------------LQ 282
           KQ         N MK    ++LA  + +     S +  I + + K             LQ
Sbjct: 227 KQNQDTKNAAINYMKSLSMWDLAIFERVVLITKSFICGILLLQNKSPLITAPSSLRDDLQ 286

Query: 283 I--EEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATV 324
           I  E+   L  LE   Q ++WG VE  HD++  D+R  I++A +
Sbjct: 287 ISTEDIAHLATLEIFHQTERWGEVEDTHDVNKRDIRRNINAAAI 330


>gi|344245163|gb|EGW01267.1| ATP synthase mitochondrial F1 complex assembly factor 2 [Cricetulus
           griseus]
          Length = 73

 Score = 55.5 bits (132), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 22/59 (37%), Positives = 41/59 (69%)

Query: 270 LVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGL 328
           +V+ +G+   +L +E+A+ L RLEE+ Q+ KWG +E  HD ++ +LR + ++ T+F+ L
Sbjct: 1   MVLTLGLIDRRLTVEQAVLLSRLEEEYQIQKWGNIEWAHDYELQELRARTAAGTLFVHL 59


>gi|68484641|ref|XP_713780.1| hypothetical protein CaO19.3686 [Candida albicans SC5314]
 gi|68484710|ref|XP_713746.1| hypothetical protein CaO19.11170 [Candida albicans SC5314]
 gi|46435257|gb|EAK94643.1| hypothetical protein CaO19.11170 [Candida albicans SC5314]
 gi|46435292|gb|EAK94677.1| hypothetical protein CaO19.3686 [Candida albicans SC5314]
          Length = 403

 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 66/298 (22%), Positives = 113/298 (37%), Gaps = 73/298 (24%)

Query: 92  VGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPT--LGLAKAIGAEWDYQQTD 149
            G RF++K   +  ++   + + LD +TL+TP   PL+LP     LA  I  EW +    
Sbjct: 109 TGTRFWKKGEVKFNNETQKYEIQLDGKTLRTPLGFPLELPINKKQLAYLIAHEWTHLPDI 168

Query: 150 GIRPFMMPLMKLACTAL----------------ERVPLTRPKIIEHLMKKFNQDLVFCRA 193
            ++   +PL  LA  A+                E + L   K+   +++  + D   C  
Sbjct: 169 KVKSSTLPLTALATRAIDLSQQHLSDLKTEKAEEMLALEDIKL--QMLRYLDTDT--CLI 224

Query: 194 PADNDLTSG-VHERQVQKIDPLLKWVESEFGFKPVVYSS--------------------- 231
            A N    G + +RQ +   PL+    +EF     +Y+                      
Sbjct: 225 FATNKECDGKLRKRQEEIYRPLI----NEFNEFFTIYAHNKNLIPRQKSIELKYLDCETD 280

Query: 232 -FFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGKLQ-------- 282
              G KQ++     V + + +   Y+L A++       S +  I + R  +         
Sbjct: 281 GLRGNKQDETTQLVVLDWLNQLPIYDLIALEKTILTTKSFLCGITLLRSNVNDIETLKEL 340

Query: 283 ----------------IEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATV 324
                           +EE +EL  LE   Q ++WG VE  HD+D  D    ++SA +
Sbjct: 341 YQFNKNSIDEDYYHKTLEELVELGNLETIYQTEEWGEVEDTHDVDKHDWLRNLASAAL 398


>gi|119576082|gb|EAW55678.1| ATP synthase mitochondrial F1 complex assembly factor 2, isoform
           CRA_c [Homo sapiens]
          Length = 73

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 22/59 (37%), Positives = 41/59 (69%)

Query: 270 LVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGL 328
           +V+ +G+   +L +E+A+ L RLEE+ Q+ KWG +E  HD ++ +LR + ++ T+F+ L
Sbjct: 1   MVLTLGLIDLRLTVEQAVLLSRLEEEYQIQKWGNIEWAHDYELQELRARTAAGTLFIHL 59


>gi|255730835|ref|XP_002550342.1| hypothetical protein CTRG_04640 [Candida tropicalis MYA-3404]
 gi|240132299|gb|EER31857.1| hypothetical protein CTRG_04640 [Candida tropicalis MYA-3404]
          Length = 350

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 65/289 (22%), Positives = 109/289 (37%), Gaps = 58/289 (20%)

Query: 92  VGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLP--TLGLAKAIGAEWDYQQTD 149
            G RF++K       D   + + LD +TL+TP   PL+LP     LA  I  EW +    
Sbjct: 61  TGARFWKKGDVYFNPDTKKYEIQLDGKTLRTPLGFPLELPESKKQLAYLIAHEWTHLPDL 120

Query: 150 GIRPFMMPLMKLACTALE------------RVPLTRPKIIEHLMKKFNQDLVFCRAPADN 197
            ++   +PL  LA  A++            +  L    I   +++  + D   C   A N
Sbjct: 121 KVKSSTLPLTALATRAIDLSKHHLSDSDKAKEMLALEDIKLQMLRYLDTDT--CLIFATN 178

Query: 198 DLTSG-VHERQVQKIDPLL--------KWVES----------EFGFKPVVYSSFFGGKQE 238
               G + +RQ +   PL+        K+  +          E  F         G KQ 
Sbjct: 179 RECDGKLRKRQEEIYRPLIAEFDEFFTKYAHTKKLIPENESIELKFLDCEKDGLRGNKQG 238

Query: 239 DGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGKLQ---------------- 282
           +   + V + + +   Y+L A++     + S +  I + R  +                 
Sbjct: 239 EKTQEVVLDWLDQLPIYDLIALEKTILTSKSFLCGITLLRSNVNDEQTLKSLYQINKQDT 298

Query: 283 -------IEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATV 324
                  +E+ +EL  LE   Q  +WG VE  HD+D  D    ++SA +
Sbjct: 299 KDYYHKSLEDVVELANLETIFQTGEWGEVEDTHDVDKHDWLRNLASAAL 347


>gi|296536581|ref|ZP_06898662.1| ATP12 ATPase [Roseomonas cervicalis ATCC 49957]
 gi|296263091|gb|EFH09635.1| ATP12 ATPase [Roseomonas cervicalis ATCC 49957]
          Length = 235

 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 93/214 (43%), Gaps = 13/214 (6%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRF+++     +    G+ V LD R L+ P   PL LP+L LA+A+  EW  Q   G + 
Sbjct: 2   KRFWDRAEALPS--AEGFAVQLDGRPLRLPGSGPLLLPSLPLAEAVAEEW--QVAGGAKG 57

Query: 154 FMM-----PLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQV 208
             M     PL ++  T LER+       +  L +    DL  C   AD    +G   RQ 
Sbjct: 58  GEMTMEQVPLTRVVATGLERIAADPGASVTALAEYGGTDL-LCYHAADEPRLAG---RQA 113

Query: 209 QKIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAH 268
           ++  PLL W          V +      Q    +  +   +   +  ELAA+     A  
Sbjct: 114 REWQPLLDWAALALDAPLKVTTGIMPVAQPPESLAALRRALAARNALELAALGVAIPALG 173

Query: 269 SLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
           SLV+ + +  G+L   EA  L  L+E  Q ++WG
Sbjct: 174 SLVLGLAMAEGRLDAAEACRLAFLDEAFQQERWG 207


>gi|312377828|gb|EFR24564.1| hypothetical protein AND_10746 [Anopheles darlingi]
          Length = 216

 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/165 (23%), Positives = 72/165 (43%), Gaps = 20/165 (12%)

Query: 176 IIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDPLLKWVESEFGFK-----PVVYS 230
           ++ +L+   + D +   +  + +L     + Q Q+ +P++ W    +         +V  
Sbjct: 55  MVNYLVNYISTDTILFHSSEEPELK----KLQTQEWEPIIDWCNKRYEINLASTDSLVVP 110

Query: 231 SFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAA---HSLVIAIGIFRGKLQIEEAI 287
           +F  G        T  NL +    Y  AA+     A     S+++ +      L  E A+
Sbjct: 111 TFAPG--------TAMNLSRYFSSYNTAALHGFVFAVDTIKSIILTMACVDRHLTTERAV 162

Query: 288 ELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLGLSRRN 332
           +L RLEE+ Q   WG VE  HDI   D + ++S+A +++  +  N
Sbjct: 163 QLARLEEEFQQGHWGKVEWAHDIQRLDTQSRLSAALLYVHFNSSN 207


>gi|448517960|ref|XP_003867895.1| Atp12 protein [Candida orthopsilosis Co 90-125]
 gi|380352234|emb|CCG22458.1| Atp12 protein [Candida orthopsilosis]
          Length = 348

 Score = 54.7 bits (130), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 65/294 (22%), Positives = 104/294 (35%), Gaps = 59/294 (20%)

Query: 90  SIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLG--LAKAIGAEWDYQQ 147
           S  G RF++K           + + LD +TL+TP   PL LP     LA  I  EW +  
Sbjct: 54  SKTGSRFWDKGHVFHNQQTGRFEIQLDGKTLRTPLGLPLTLPEKKKQLAYLIAHEWTHLP 113

Query: 148 TDGIRPFMMPLMKLACTALERVPLTRPKIIEH---------------LMKKFNQDLVFCR 192
              ++   +PL  LA  A++       K + +               ++K  + D     
Sbjct: 114 KISLKSSALPLTGLAARAIDLESKRSQKEVNNDGGEEMLAIEDLKLSMLKYLDTDTCLIF 173

Query: 193 APADNDLTSGVHERQVQKIDPLLKWVES------------------EFGFKPVVYSSFFG 234
           A A  D    +  RQ +   PL++                      E  F         G
Sbjct: 174 AGA-KDCDGKLRVRQEELYRPLIEEYNDFFTKYGLSRNLLKENERIELKFLDCEKDGLRG 232

Query: 235 GKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGKLQ------------ 282
            KQ     + V + + + D +E  A++       S + A+ + R  +             
Sbjct: 233 NKQSLKTQQVVIDWLDQLDIFEFVALEKSILTTKSFLCAVSVLRSNVSDEPRMRDIFQLN 292

Query: 283 -----------IEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVF 325
                      +EE IEL  LE  LQ  +WG VE  HD++  D    ++SA + 
Sbjct: 293 RDSNDLFWYKTVEEIIELGNLETILQTGEWGEVEDTHDVEQRDWLRSLTSAALL 346


>gi|83774261|dbj|BAE64386.1| unnamed protein product [Aspergillus oryzae RIB40]
 gi|391868038|gb|EIT77261.1| ATP12 protein, putative [Aspergillus oryzae 3.042]
          Length = 225

 Score = 54.3 bits (129), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 51/215 (23%), Positives = 89/215 (41%), Gaps = 37/215 (17%)

Query: 150 GIRPFMMPLMKLACTALERV-------PLTRPKIIEHLMKKFNQDLVFCRAPADNDLT-- 200
            ++  M+PL  LA  A + V         TR +I++  M+    D + C  P  ND +  
Sbjct: 7   ALKNHMIPLTSLAARAADIVREDANGETTTRDQIVKTAMRYLETDTLLCWVPEKNDYSVE 66

Query: 201 ---------SGVHERQVQKIDPLLKWVESE----FGFKPVVYS-SFFGGKQEDGLIKTVE 246
                      + E Q++    ++ ++ +        +P++ S S     Q       ++
Sbjct: 67  EVDEHGRRPESLREAQMRVAKNVISFLSTMVWPGIEIRPILDSESILPVSQTQATNDIIK 126

Query: 247 NLMKKTDDYELAAIDAIAAAAHSLVIAIGIF--------------RGKLQIEEAIELIRL 292
             +     ++LAA++    A+ SL++A+ +               + K  IEEA E   L
Sbjct: 127 QWIFGLQAHDLAALERGILASKSLLVAVRLVSEWSENLRHVQRQNQKKFGIEEAAEASSL 186

Query: 293 EEDLQVDKWGLVEGGHDIDIADLRVQISSATVFLG 327
           E   Q D WG VE  HD+D  DL+ Q+ S  V + 
Sbjct: 187 EVKWQTDMWGEVEDTHDVDKEDLKRQLGSVIVLVS 221


>gi|440802968|gb|ELR23882.1| ATP synthase mitochondrial F1 complex assembly factor 2, putative
           [Acanthamoeba castellanii str. Neff]
          Length = 181

 Score = 54.3 bits (129), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 66/132 (50%), Gaps = 17/132 (12%)

Query: 70  QETASSSSSSVTMP------MSFMTGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTP 123
           ++ A  +S   T P      +S + G    +R+Y++VS  E +   GW  +LD R + TP
Sbjct: 46  KDQAEPASEDTTKPKVKGAKLSGVQGGSKTRRWYKQVSVGERE--GGWAPLLDGRVILTP 103

Query: 124 SKRPLKLPTLGLAKAIGAEWDYQQTDGIRPFMMPLMKLACTALERVPLTRPKIIEHL--- 180
            + PL    +  A  I AEW+ QQ   I+P  MP+ +LA T ++R+   +P+I   L   
Sbjct: 104 MEHPL----VHNALMIAAEWEMQQPY-IKPDTMPITRLATTIMDRLVEGKPEIRHALTLE 158

Query: 181 -MKKFNQDLVFC 191
            +     D ++C
Sbjct: 159 MLDYIETDTIWC 170


>gi|238879291|gb|EEQ42929.1| hypothetical protein CAWG_01154 [Candida albicans WO-1]
          Length = 355

 Score = 54.3 bits (129), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 66/298 (22%), Positives = 112/298 (37%), Gaps = 73/298 (24%)

Query: 92  VGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPT--LGLAKAIGAEWDYQQTD 149
            G RF++K   +   +   + + LD +TL+TP   PL+LP     LA  I  EW +    
Sbjct: 61  TGTRFWKKGEVKFNKETQKYEIQLDGKTLRTPLGFPLELPINKKQLAYLIAHEWTHLPDI 120

Query: 150 GIRPFMMPLMKLACTAL----------------ERVPLTRPKIIEHLMKKFNQDLVFCRA 193
            ++   +PL  LA  A+                E + L   K+   +++  + D   C  
Sbjct: 121 KVKSSTLPLTALATRAIDLSQQHLSDMKTEKAEEMLALEDIKL--QMLRYLDTDT--CLI 176

Query: 194 PADNDLTSG-VHERQVQKIDPLLKWVESEFGFKPVVYSS--------------------- 231
            A N    G + +RQ +   PL+    +EF     +Y+                      
Sbjct: 177 FATNKECDGKLRKRQEEIYRPLI----NEFNEFFTIYAHNKNLIPRQKSIELKYLDCETD 232

Query: 232 -FFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGKLQ-------- 282
              G KQ++     V + + +   Y+L A++       S +  I + R  +         
Sbjct: 233 GLRGNKQDETTQLVVLDWLNQLPIYDLIALEKTILTTKSFLCGITLLRSNVNDIETLKEL 292

Query: 283 ----------------IEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATV 324
                           +EE +EL  LE   Q ++WG VE  HD+D  D    ++SA +
Sbjct: 293 YQFNKNSIDEDYYHKTLEELVELGNLETIYQTEEWGEVEDTHDVDKHDWLRNLASAAL 350


>gi|190345211|gb|EDK37059.2| hypothetical protein PGUG_01157 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 348

 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 66/287 (22%), Positives = 104/287 (36%), Gaps = 56/287 (19%)

Query: 95  RFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLG--LAKAIGAEWDYQQTDGIR 152
           RF+EKV  +  D  N + V LD +TLKTP    L +P     LA  I  EW       I+
Sbjct: 62  RFWEKVDAKYNDATNSYEVQLDGKTLKTPLGYKLAVPATKKQLAHLIAHEWANVPELKIK 121

Query: 153 PFMMPLMKLACTALER-----------VPLTRPKIIE-HLMKKFNQDLVFCRAPADNDLT 200
              +PL  LA  A++              + R + I  +L+K  + D        D +  
Sbjct: 122 HGSLPLTSLASRAIDLQNTNEGDSDAIAKVGRLEDIRLNLLKYLDTDTCLIFTTLD-EYE 180

Query: 201 SGVHERQVQKIDPLLKWVES------------------EFGFKPVVYSSFFGGKQEDGLI 242
             +  RQ +   PL+K  E                   E            G +Q     
Sbjct: 181 GKLRARQDELYLPLIKEYEDFFTKYAHDRKLLPQDMKVELNSLDCETDGLRGNEQSITTQ 240

Query: 243 KTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGKL--------------------- 281
             V + ++    Y+L A++    A+ S +    + R                        
Sbjct: 241 NVVSHWLESLPIYDLVALEKAILASKSFLCGASVLRASCSDLNIMQKLYQVNKTTKDDYF 300

Query: 282 --QIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFL 326
              I+E +EL  LE   Q ++WG VE  HD+D  +    ++SA + +
Sbjct: 301 IKSIDEIVELGNLETIFQTEQWGEVEDTHDVDKVEWLRSLTSAALVV 347


>gi|213403966|ref|XP_002172755.1| F1-ATPase chaperone Atp12 [Schizosaccharomyces japonicus yFS275]
 gi|212000802|gb|EEB06462.1| F1-ATPase chaperone Atp12 [Schizosaccharomyces japonicus yFS275]
          Length = 278

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/208 (23%), Positives = 86/208 (41%), Gaps = 14/208 (6%)

Query: 113 VMLDYRTLKTPSKRPLKLPTL--GLAKAIGAEWDYQQTDGIRPFMMPLMKLACTALERVP 170
           ++L  + L+T +  P+ LP     +A  +  EW+      I  + + L  L   A++   
Sbjct: 70  ILLGNKPLQTTNGFPVVLPKTMESVAHLVAREWNQLTPGSIGKYQLSLTSLVTRAIDMKT 129

Query: 171 LTRPK--------IIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDPLLKWVESEF 222
               K        + E LM   + D V   AP+ ++    +   Q Q+  PL   +E  F
Sbjct: 130 WKEQKNGEETLNVLYEQLMNYLDSDTVLVYAPS-HEYEGKLLAEQKQRYFPLKANIEELF 188

Query: 223 GFKPVVYSSFFG---GKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRG 279
           G +        G    KQ   + +     +++ + + LA  + I  +  S VI + +   
Sbjct: 189 GLQLKYLDGDKGLIPNKQPLEVKRAAFQWLRQQNHWRLACFEQITRSMKSFVIGMHMTMN 248

Query: 280 KLQIEEAIELIRLEEDLQVDKWGLVEGG 307
           K+  + AIE   LE   Q +KWG ++ G
Sbjct: 249 KMDTKNAIECANLETKYQTEKWGRLKEG 276


>gi|148694659|gb|EDL26606.1| ATP synthase mitochondrial F1 complex assembly factor 2, isoform
           CRA_b [Mus musculus]
          Length = 145

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 55/99 (55%), Gaps = 6/99 (6%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+ VS  + +   G+ + LD+R LKTP  +   +P+  LA A+  EWD QQ D I+ 
Sbjct: 47  KRFYQNVSISQGE--GGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWDSQQ-DTIKF 103

Query: 154 FMMPLMKLACTALERVPLTRPK--IIEHLMKKFNQDLVF 190
           + M L  L  T+L+  P  R K  +I   +K  + D ++
Sbjct: 104 YTMHLTTLCNTSLDN-PTQRSKDQLIRAAVKFLDTDTIW 141


>gi|217978255|ref|YP_002362402.1| ATP12 ATPase [Methylocella silvestris BL2]
 gi|217503631|gb|ACK51040.1| ATP12 ATPase [Methylocella silvestris BL2]
          Length = 291

 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 61/220 (27%), Positives = 102/220 (46%), Gaps = 13/220 (5%)

Query: 94  KRFYEKVSTRE-ADDGNG-WTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGI 151
           +RFY   +    A  G G + ++LD R  +TP++ PL LPTL  A+AI AEW+ QQ + I
Sbjct: 46  RRFYSHAAAAPCASSGEGAFALLLDGRPARTPARNPLALPTLEAAEAIAAEWERQQ-ELI 104

Query: 152 RPFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKI 211
            P  MPL ++A +A++ V       I  + +    DL+  RA         +   +    
Sbjct: 105 DPGQMPLTRIANSAIDGVSNEMDATIADIAQFGGSDLICYRA----GEPEALALAEAAAW 160

Query: 212 DPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYE------LAAIDAIAA 265
           DP+L +   + G + +        +Q +   + V   +++    E      LAA+  +  
Sbjct: 161 DPMLNFAREKLGARLICAQGVNYVEQPEPARRAVLQAVREIARPEAGGAFALAALHVMTT 220

Query: 266 AAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVE 305
              S ++A+ +  G L  EEA     ++ED Q+  WG  E
Sbjct: 221 LTGSALLALAVAHGALTAEEAWAAAHVDEDYQMQLWGADE 260


>gi|149052827|gb|EDM04644.1| ATP synthase mitochondrial F1 complex assembly factor 2
           (predicted), isoform CRA_a [Rattus norvegicus]
          Length = 154

 Score = 52.0 bits (123), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 55/99 (55%), Gaps = 6/99 (6%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+ VS  + +   G+ + LD+R LKTP  +   +P+  LA A+  EWD QQ D I+ 
Sbjct: 56  KRFYQNVSISQGE--GGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWDSQQ-DTIKF 112

Query: 154 FMMPLMKLACTALERVPLTRPK--IIEHLMKKFNQDLVF 190
           + M L  L  T+L+  P  R K  +I   +K  + D ++
Sbjct: 113 YTMHLTTLCNTSLDN-PTQRNKDQLIRAAVKFLDTDTIW 150


>gi|410080640|ref|XP_003957900.1| hypothetical protein KAFR_0F01680 [Kazachstania africana CBS 2517]
 gi|372464487|emb|CCF58765.1| hypothetical protein KAFR_0F01680 [Kazachstania africana CBS 2517]
          Length = 319

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 62/273 (22%), Positives = 106/273 (38%), Gaps = 44/273 (16%)

Query: 93  GKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKL--PTLGLAKAIGAEWDYQQTDG 150
           G++ ++ VS  +      + + LD +T+KTP   PL +      LA  +  EWD  +   
Sbjct: 45  GRKLWKHVSVNDTISQEKFHIQLDGKTIKTPLGNPLAVGKDRDALAYLLMKEWDNLKNLS 104

Query: 151 IRPFMMPLMKLA--CTALE--------------RVPLTRPKIIEHLMKKFNQDLVFCRAP 194
            +   +PL  L   C  LE              ++   +  I   L++  + D +   +P
Sbjct: 105 SKRNSLPLTSLVSRCIDLEVATNEKSSGPDAAAKIGGGKEVIKNDLLRYLDTDTLLVFSP 164

Query: 195 ADNDLTSGVHERQVQKIDPLLKWVES----EFGFKPVVYSSFFGGKQEDGLIKTVEN--- 247
             ++    + E Q     P++K +ES     FG  P+        +   GL   V+N   
Sbjct: 165 R-SEYEGALREEQDSLYLPIIKKIESFLSENFGSSPITLQILDADRH--GLRGNVQNPET 221

Query: 248 ---LMKKTDD---YELAAIDAIAAAAHSLVIAIGIFRGK----------LQIEEAIELIR 291
               MK  D    + L   + +     S +  I + + +            IEE      
Sbjct: 222 RKAAMKYLDSLCLWNLVVFENVVLTTKSFICGILLLQDRAFSNSPPDLHYSIEEIERAAT 281

Query: 292 LEEDLQVDKWGLVEGGHDIDIADLRVQISSATV 324
           LE   Q  +WG VE  H I  A+LR+ + +A+V
Sbjct: 282 LETIHQTRRWGEVEEAHAISKAELRMNLYTASV 314


>gi|146423709|ref|XP_001487780.1| hypothetical protein PGUG_01157 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 348

 Score = 51.6 bits (122), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 104/286 (36%), Gaps = 57/286 (19%)

Query: 95  RFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLG--LAKAIGAEWDYQQTDGIR 152
           RF+EKV  +  D  N + V LD +TLKTP    L +P     LA  I  EW       I+
Sbjct: 62  RFWEKVDAKYNDATNSYEVQLDGKTLKTPLGYKLAVPATKKQLAHLIAHEWANVPELKIK 121

Query: 153 PFMMPLMKLACTALER-----------VPLTRPKIIE-HLMKKFNQDLVFCRAPADNDLT 200
              +PL  LA  A++              + R + I  +L+K  + D        D +  
Sbjct: 122 HGSLPLTSLASRAIDLQNTNEGDSDAIAKVGRLEDIRLNLLKYLDTDTCLIFTTLD-EYE 180

Query: 201 SGVHERQVQKIDPLLKWVES------------------EFGFKPVVYSSFFGGKQEDGLI 242
             +  RQ +   PL+K  E                   E            G +Q     
Sbjct: 181 GKLRARQDELYLPLIKEYEDFFTKYAHDRKLLPQDMKVELNSLDCETDGLRGNEQSITTQ 240

Query: 243 KTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGKL--------------------- 281
             V + ++    Y+L A++    A+ S +    + R                        
Sbjct: 241 NVVLHWLELLPIYDLVALEKAILASKSFLCGASVLRASCSDLNIMQKLYQVNKTTKDDYF 300

Query: 282 --QIEEAIELIRLEEDLQVDKWGLVEGGHDIDIAD-LRVQISSATV 324
              I+E +EL  LE   Q ++WG VE  HD+D  + LR   S+A V
Sbjct: 301 IKSIDEIVELGNLETIFQTEQWGEVEDTHDVDKVEWLRSLTSAALV 346


>gi|145535594|ref|XP_001453530.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124421252|emb|CAK86133.1| unnamed protein product [Paramecium tetraurelia]
          Length = 267

 Score = 51.2 bits (121), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 59/248 (23%), Positives = 113/248 (45%), Gaps = 24/248 (9%)

Query: 94  KRFYEKVSTREA----DDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTD 149
           KR Y++ +   A    +  + W + LD +++KT  +  L +P+  LA  I  E++ +Q +
Sbjct: 23  KRTYKEATVEMAINPINPYHQWFIKLDGKSIKTQQRNILAVPSPQLAACIAQEFN-RQKE 81

Query: 150 GIRPFMMPLMKLACTALE------RVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGV 203
            +    MPLM LA  A++          T   II HL      D++  R   +    S +
Sbjct: 82  FLSFKQMPLMMLARNAIDLDYDATNREYTEKTIISHL----ENDIILHRRNQN----SQL 133

Query: 204 HERQVQKIDPLLKWVESEFGFKPVVYSSF-FGGKQEDGLIKTVENLMKKTDDYELAAIDA 262
            + Q Q++DP L+   S FG       S       +   +K +E+L++  ++++L ++ +
Sbjct: 134 LKIQQQQLDPQLRLFNSRFGMDIQANDSIQIASLSQQNKVK-IESLIRGLNNWQLVSLSS 192

Query: 263 IAAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRV--QIS 320
            A    S ++AI +  G + + +A+ L  +E      K    E   + D  D ++   + 
Sbjct: 193 KADNLKSCILAIQLSYGLVDLNKALSLYDIENQFN-KKLTETENPQESDEEDNKISMNVQ 251

Query: 321 SATVFLGL 328
           +A +F  L
Sbjct: 252 AAQLFSSL 259


>gi|401625185|gb|EJS43206.1| atp12p [Saccharomyces arboricola H-6]
          Length = 325

 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 62/280 (22%), Positives = 108/280 (38%), Gaps = 52/280 (18%)

Query: 90  SIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTP--------SKRPLKLPTLGLAKAIGA 141
           S   ++F+EKVS     +     + LD +T++TP          R L      LA  +  
Sbjct: 48  SKTSQKFWEKVSLNRDSENKKIALQLDGKTIRTPLGNGIIVDDSRSL------LAYLLKL 101

Query: 142 EWDYQQTDGIRPFMMPLMKLA--CTALERV--PLTRPKII-----------EHLMKKFNQ 186
           EW    +  I+   +PL  L   C  L+ +  P   P++I           + L++  + 
Sbjct: 102 EWSSLSSLSIKTHSLPLTSLVARCIDLQMINEPGCDPQLIAKIGGNSDAIKDQLLRYLDT 161

Query: 187 DLVFCRAPADNDLTSGVHERQVQKIDPLLKWVE---SEFGFKPVVYSSFF--------GG 235
           D +   +P  N+    +   Q +   PL+K +E   S+F  KP V             G 
Sbjct: 162 DTLLVFSPI-NEFEGKLRTEQNESYLPLIKGIEGFLSKFSSKPDVQLQVLDADIHGLRGN 220

Query: 236 KQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGK-----------LQIE 284
           +Q D +       M     ++LA ++       S +  + +   K           + +E
Sbjct: 221 QQSDIVKDAATKYMDGLSPWDLAILEKAVLTTKSFICGVLLLENKKYPEHLPSTLRVDME 280

Query: 285 EAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATV 324
             +    LE   Q +KWG +E  HD+D  D   +I +A +
Sbjct: 281 TIVRAATLETIFQTEKWGELEDTHDVDKRDFIRKIHTAAI 320


>gi|119576083|gb|EAW55679.1| ATP synthase mitochondrial F1 complex assembly factor 2, isoform
           CRA_d [Homo sapiens]
 gi|194377522|dbj|BAG57709.1| unnamed protein product [Homo sapiens]
          Length = 118

 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 3/66 (4%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRP 153
           KRFY+ VS  + +   G+ + LD+R LKTP  +   +P+  LA A+  EWD QQ D I+ 
Sbjct: 47  KRFYQNVSITQGE--GGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWDSQQ-DTIKY 103

Query: 154 FMMPLM 159
           + M L+
Sbjct: 104 YTMHLV 109


>gi|349579025|dbj|GAA24188.1| K7_Atp12p [Saccharomyces cerevisiae Kyokai no. 7]
          Length = 325

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 60/274 (21%), Positives = 108/274 (39%), Gaps = 40/274 (14%)

Query: 90  SIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLG--LAKAIGAEWDYQQ 147
           S   ++F+EKVS     +     + LD RT+KTP    + +      LA  +  EW    
Sbjct: 48  SKTSQKFWEKVSLNRDVEKGKIALQLDGRTIKTPLGNGIIVDNAKSLLAYLLKLEWSSLS 107

Query: 148 TDGIRPFMMPLMKLA--CTALERV--PLTRPKII-----------EHLMKKFNQDLVFCR 192
           +  I+   +PL  L   C  L+    P   P+++             L++  + D +   
Sbjct: 108 SLSIKTHSLPLTSLVARCIDLQMTNEPGCDPQLVAKIGGNSDVIKNQLLRYLDTDTLLVF 167

Query: 193 APADNDLTSGVHERQVQKIDPLLKWVE-------SEFGFKPVVYSS----FFGGKQEDGL 241
           +P  N+    +   Q +   P++K +E       SE   +  +  +      G +Q D +
Sbjct: 168 SPM-NEFEGRLRNAQNELYIPIIKGMEEFLRNFSSESNIRLQILDADIHGLRGNQQSDIV 226

Query: 242 IKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIR---------- 291
               +  M     ++LA ++       S +  + +   K      I  ++          
Sbjct: 227 KNAAKKYMSSLSPWDLAILEKTVLTTKSFICGVLLLENKKNTANLIPALKTDMDNIVRAA 286

Query: 292 -LEEDLQVDKWGLVEGGHDIDIADLRVQISSATV 324
            LE   QV+KWG VE  HD+D  D+R +I +A +
Sbjct: 287 TLETIFQVEKWGEVEDTHDVDKRDIRRKIHTAAI 320


>gi|254582364|ref|XP_002497167.1| ZYRO0D16984p [Zygosaccharomyces rouxii]
 gi|186703805|emb|CAQ43494.1| Protein ATP12 [Zygosaccharomyces rouxii]
 gi|238940059|emb|CAR28234.1| ZYRO0D16984p [Zygosaccharomyces rouxii]
          Length = 321

 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 55/267 (20%), Positives = 101/267 (37%), Gaps = 38/267 (14%)

Query: 90  SIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLG--LAKAIGAEWDYQQ 147
           S + K+F+++VS  E        + LD + ++TP    L +      LA+ +  EW    
Sbjct: 46  SQIAKKFWDQVSVGENVQNGKLVIQLDKKPVRTPLGNHLAVDKDRKILARLLQKEWSNIS 105

Query: 148 TDGIRPFMMPLMKLA--CTALE-------------RVPLTRPKIIEHLMKKFNQDLVFCR 192
              ++   +PL  L   C  LE             ++   R ++   L++  + D +   
Sbjct: 106 HGSVKTHALPLTSLIARCIDLEAANAEGAHPDLKVKIGGNRNELSNSLLRYLDTDTILVF 165

Query: 193 APADNDLTSGVHERQVQKIDPLLKWVE---SEFGFKPVVYS-------SFFGGKQEDGLI 242
           +P D +L   +   Q     P++  VE   S+   KP+             G  Q+   +
Sbjct: 166 SPRD-ELEGKLRAAQDDMYLPIIGSVEKFLSQHSDKPISLQILDADLHGLRGNAQKPETL 224

Query: 243 KTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDL------ 296
                 +     ++LA  +       S +  I + + K   + A  L    ED+      
Sbjct: 225 AAARKFLDSLSAWDLAIFEKTVLTTKSFICGILLLQNKASTDPAKGLQYTMEDIARAATL 284

Query: 297 ----QVDKWGLVEGGHDIDIADLRVQI 319
               Q ++WG VE  HD+D  D+R  +
Sbjct: 285 ETIHQTERWGEVEDTHDVDKRDIRRNV 311


>gi|6322281|ref|NP_012355.1| Atp12p [Saccharomyces cerevisiae S288c]
 gi|1168604|sp|P22135.2|ATP12_YEAST RecName: Full=Protein ATP12, mitochondrial; Flags: Precursor
 gi|1008382|emb|CAA89475.1| ATP12 [Saccharomyces cerevisiae]
 gi|285812727|tpg|DAA08625.1| TPA: Atp12p [Saccharomyces cerevisiae S288c]
          Length = 325

 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 60/274 (21%), Positives = 108/274 (39%), Gaps = 40/274 (14%)

Query: 90  SIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLG--LAKAIGAEWDYQQ 147
           S   ++F+EKVS     +     + LD RT+KTP    + +      LA  +  EW    
Sbjct: 48  SKTSQKFWEKVSLNRDVEKGKIALQLDGRTIKTPLGNGIIVDNAKSLLAYLLKLEWSSLS 107

Query: 148 TDGIRPFMMPLMKLA--CTALERV--PLTRPKII-----------EHLMKKFNQDLVFCR 192
           +  I+   +PL  L   C  L+    P   P+++             L++  + D +   
Sbjct: 108 SLSIKTHSLPLTSLVARCIDLQMTNEPGCDPQLVAKIGGNSDVIKNQLLRYLDTDTLLVF 167

Query: 193 APADNDLTSGVHERQVQKIDPLLKWVE-------SEFGFKPVVYSS----FFGGKQEDGL 241
           +P  N+    +   Q +   P++K +E       SE   +  +  +      G +Q D +
Sbjct: 168 SPM-NEFEGRLRNAQNELYIPIIKGMEEFLRNFSSESNIRLQILDADIHGLRGNQQSDIV 226

Query: 242 IKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIR---------- 291
               +  M     ++LA ++       S +  + +   K      I  ++          
Sbjct: 227 KNAAKKYMSSLSPWDLAILEKTVLTTKSFICGVLLLENKKDTANLIPALKTDMDNIVRAA 286

Query: 292 -LEEDLQVDKWGLVEGGHDIDIADLRVQISSATV 324
            LE   QV+KWG VE  HD+D  D+R +I +A +
Sbjct: 287 TLETIFQVEKWGEVEDTHDVDKRDIRRKIHTAAI 320


>gi|171106|gb|AAA34442.1| ATP12 [Saccharomyces cerevisiae]
          Length = 325

 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 59/270 (21%), Positives = 107/270 (39%), Gaps = 40/270 (14%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLG--LAKAIGAEWDYQQTDGI 151
           ++F+EKVS     +     + LD RT+KTP    + +      LA  +  EW    +  I
Sbjct: 52  QKFWEKVSLNRDVEKGKIALQLDGRTIKTPLGNGIIVDNAKSLLAYLLKLEWSSLSSLSI 111

Query: 152 RPFMMPLMKLA--CTALERV--PLTRPKII-----------EHLMKKFNQDLVFCRAPAD 196
           +   +PL  L   C  L+    P   P+++             L++  + D +   +P  
Sbjct: 112 KTHSLPLTSLVARCIDLQMTNEPGCDPQLVAKIGGNSDVIKNQLLRYLDTDTLLVFSPM- 170

Query: 197 NDLTSGVHERQVQKIDPLLKWVE-------SEFGFKPVVYSS----FFGGKQEDGLIKTV 245
           N+    +   Q +   P++K +E       SE   +  +  +      G +Q D +    
Sbjct: 171 NEFEGRLRNAQNELYIPIIKGMEEFLRNFSSESNIRLQILDADIHGLRGNQQSDIVKNAA 230

Query: 246 ENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIR-----------LEE 294
           +  M     ++LA ++       S +  + +   K      I  ++           LE 
Sbjct: 231 KKYMSSLSPWDLAILEKTVLTTKSFICGVLLLENKKDTANLIPALKTDMDNIVRAATLET 290

Query: 295 DLQVDKWGLVEGGHDIDIADLRVQISSATV 324
             QV+KWG VE  HD+D  D+R +I +A +
Sbjct: 291 IFQVEKWGEVEDTHDVDKRDIRRKIHTAAI 320


>gi|151944951|gb|EDN63206.1| ATP synthase [Saccharomyces cerevisiae YJM789]
 gi|190409333|gb|EDV12598.1| protein ATP12, mitochondrial precursor [Saccharomyces cerevisiae
           RM11-1a]
 gi|207344151|gb|EDZ71384.1| YJL180Cp-like protein [Saccharomyces cerevisiae AWRI1631]
 gi|256271365|gb|EEU06430.1| Atp12p [Saccharomyces cerevisiae JAY291]
 gi|290771056|emb|CAY80605.2| Atp12p [Saccharomyces cerevisiae EC1118]
 gi|323332946|gb|EGA74348.1| Atp12p [Saccharomyces cerevisiae AWRI796]
 gi|323337012|gb|EGA78268.1| Atp12p [Saccharomyces cerevisiae Vin13]
 gi|323348066|gb|EGA82323.1| Atp12p [Saccharomyces cerevisiae Lalvin QA23]
 gi|365764886|gb|EHN06404.1| Atp12p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
 gi|392298587|gb|EIW09684.1| Atp12p [Saccharomyces cerevisiae CEN.PK113-7D]
          Length = 325

 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 60/274 (21%), Positives = 108/274 (39%), Gaps = 40/274 (14%)

Query: 90  SIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLG--LAKAIGAEWDYQQ 147
           S   ++F+EKVS     +     + LD RT+KTP    + +      LA  +  EW    
Sbjct: 48  SKTSQKFWEKVSLNRDVEKGKIALQLDGRTIKTPLGNGIIVDNAKSLLAYLLKLEWSSLS 107

Query: 148 TDGIRPFMMPLMKLA--CTALERV--PLTRPKII-----------EHLMKKFNQDLVFCR 192
           +  I+   +PL  L   C  L+    P   P+++             L++  + D +   
Sbjct: 108 SLSIKTHSLPLTSLVARCIDLQMTNEPGCDPQLVAKIGGNSDVIKNQLLRYLDTDTLLVF 167

Query: 193 APADNDLTSGVHERQVQKIDPLLKWVE-------SEFGFKPVVYSS----FFGGKQEDGL 241
           +P  N+    +   Q +   P++K +E       SE   +  +  +      G +Q D +
Sbjct: 168 SPM-NEFEGRLRNAQNELYIPIIKGMEEFLRNFSSESNIRLQILDADIHGLRGNQQSDIV 226

Query: 242 IKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIR---------- 291
               +  M     ++LA ++       S +  + +   K      I  ++          
Sbjct: 227 KSAAKKYMSSLSPWDLAILEKTVLTTKSFICGVLLLENKKDTANLIPALKTDMDNIVRAA 286

Query: 292 -LEEDLQVDKWGLVEGGHDIDIADLRVQISSATV 324
            LE   QV+KWG VE  HD+D  D+R +I +A +
Sbjct: 287 TLETIFQVEKWGEVEDTHDVDKRDIRRKIHTAAI 320


>gi|323304412|gb|EGA58183.1| Atp12p [Saccharomyces cerevisiae FostersB]
          Length = 325

 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 60/274 (21%), Positives = 108/274 (39%), Gaps = 40/274 (14%)

Query: 90  SIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLG--LAKAIGAEWDYQQ 147
           S   ++F+EKVS     +     + LD RT+KTP    + +      LA  +  EW    
Sbjct: 48  SKTSQKFWEKVSLNRDVEKGKIALQLDGRTIKTPLGNGIIVDNAKSLLAYLLKLEWSSLS 107

Query: 148 TDGIRPFMMPLMKLA--CTALERV--PLTRPKII-----------EHLMKKFNQDLVFCR 192
           +  I+   +PL  L   C  L+    P   P+++             L++  + D +   
Sbjct: 108 SLSIKTHSLPLTSLVARCIDLQMTNEPGCDPQLVAKIGGNSDVIKNQLLRYLDTDTLLVF 167

Query: 193 APADNDLTSGVHERQVQKIDPLLKWVE-------SEFGFKPVVYSS----FFGGKQEDGL 241
           +P  N+    +   Q +   P++K +E       SE   +  +  +      G +Q D +
Sbjct: 168 SPM-NEFEGRLRNAQNELYIPIIKGMEEFLRNFSSESNIRLQILDADIHGLRGNQQSDIV 226

Query: 242 IKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIR---------- 291
               +  M     ++LA ++       S +  + +   K      I  ++          
Sbjct: 227 KSAAKXYMSSLSPWDLAILEKTVLTTKSFICGVLLLENKKDTANLIPALKTDMDNIVRAA 286

Query: 292 -LEEDLQVDKWGLVEGGHDIDIADLRVQISSATV 324
            LE   QV+KWG VE  HD+D  D+R +I +A +
Sbjct: 287 TLETIFQVEKWGEVEDTHDVDKRDIRRKIHTAAI 320


>gi|403214842|emb|CCK69342.1| hypothetical protein KNAG_0C02310 [Kazachstania naganishii CBS
           8797]
          Length = 350

 Score = 48.1 bits (113), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 54/262 (20%), Positives = 97/262 (37%), Gaps = 39/262 (14%)

Query: 93  GKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLG--LAKAIGAEWDYQQTDG 150
           G +F++ VS  E+ +     + LD ++++TP    L +      LA  +  EW       
Sbjct: 74  GTKFWKDVSLNESIEPGKTHIQLDSKSIRTPMGNSLAVSKSNQFLACLLRKEWANLPDLS 133

Query: 151 IRPFMMPLMKLA--CTALE-------------RVPLTRPKIIEHLMKKFNQDLVFCRAPA 195
           ++P+ +PL  L   C  LE             ++   R  I + L++  + D +   +P 
Sbjct: 134 VKPYSLPLTSLVSRCIDLEVSNAVNAAPDLVVKIGGDRHTINKDLLRYLDTDTLLVFSPR 193

Query: 196 DNDLTSGVHERQVQKIDPLLKWVES----EFGFKPVVYS-------SFFGGKQEDGLIKT 244
           D +    + E Q     P++K VE      F  K V                Q    +++
Sbjct: 194 D-EFEGALREEQDTLYLPIIKAVEQFLTDNFSKKTVHLKILDADVHGIASNMQSADCVES 252

Query: 245 VENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGKLQ----------IEEAIELIRLEE 294
               +     + LA  +       S +  I +   K            ++E      LE 
Sbjct: 253 ATKYLNSLSPWNLALFEKTVLTTKSFICGILLIENKTNPVHQKNLTYSLDEIERAATLEI 312

Query: 295 DLQVDKWGLVEGGHDIDIADLR 316
             Q D+WG VE  HD++  D++
Sbjct: 313 IYQTDRWGEVEDTHDVNKHDIK 334


>gi|431806513|ref|YP_007233414.1| hypothetical protein B488_11670 [Liberibacter crescens BT-1]
 gi|430800488|gb|AGA65159.1| hypothetical protein B488_11670 [Liberibacter crescens BT-1]
          Length = 144

 Score = 47.8 bits (112), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 31/116 (26%), Positives = 55/116 (47%), Gaps = 5/116 (4%)

Query: 188 LVFCRAPADNDLTSGVHERQVQKIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVEN 247
           ++F R  +  +L     ERQ Q+ DPL+ W+   FG   ++       KQ    I     
Sbjct: 1   MLFYRVDSPRELV----ERQSQRWDPLIDWMARVFGANFILSRGISYKKQPLEAINAFSG 56

Query: 248 LMKKTD-DYELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWG 302
            ++K +    L+ +  +A   +S+++++ +    + I EA E+  LEED   D WG
Sbjct: 57  ALQKYNSQIMLSCLHMMATFTNSVLVSLAVAENIISINEAWEIAYLEEDWMNDYWG 112


>gi|154279464|ref|XP_001540545.1| predicted protein [Ajellomyces capsulatus NAm1]
 gi|150412488|gb|EDN07875.1| predicted protein [Ajellomyces capsulatus NAm1]
          Length = 218

 Score = 47.8 bits (112), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 28/131 (21%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLG--LAKAIGAEWDY--QQTD 149
           +RF++ V  +E DD  G+ + LD R ++TP+K+ L +P     LA AI  EWD       
Sbjct: 94  RRFWKDVHVKEVDD--GYQIFLDSRAVRTPAKKILTIPASKPHLAHAIALEWDLLVSAQQ 151

Query: 150 GIRPFMMPLMKLACTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQ 209
            ++  ++PL  L   A                    QD+    A   N + + + +  ++
Sbjct: 152 ALKQHLIPLTSLTARA--------------------QDIAVEDAAGQNTIRNQITKATMR 191

Query: 210 KI--DPLLKWV 218
            +  DPLL W 
Sbjct: 192 YLDTDPLLSWA 202


>gi|260947912|ref|XP_002618253.1| hypothetical protein CLUG_01712 [Clavispora lusitaniae ATCC 42720]
 gi|238848125|gb|EEQ37589.1| hypothetical protein CLUG_01712 [Clavispora lusitaniae ATCC 42720]
          Length = 349

 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 68/288 (23%), Positives = 112/288 (38%), Gaps = 58/288 (20%)

Query: 95  RFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPT--LGLAKAIGAEWDYQQTDGIR 152
           +F++KV T        +   LD + LKTP    L +P     LA  +  EW+      I+
Sbjct: 59  KFWDKVETSFNKKTQSFETHLDGKALKTPLGNILSVPANKKQLAYLVSHEWENLIDLKIK 118

Query: 153 PFMMPLMKLACTALER-VPLTRPKIIEHLMKKFN--QDLVF----------CRAPADNDL 199
           P  +PL  +   A +  +     ++ + L+ K    QD+ +          C      D 
Sbjct: 119 PNSLPLTSMVARATDLGIVFGSEEVDKDLVTKVGDLQDIKYNILRYLDTDTCLIFTTLDE 178

Query: 200 TSG-VHERQVQKIDPLLKWVES---EFGFKPVVYSS-------FFGGKQEDGL-----IK 243
             G +  +Q +   PL++  ES   EFG K  +  S        +   + DG+       
Sbjct: 179 YEGRLRNKQEELYRPLIEEFESYFTEFGRKKDLLPSPDHKVELTYLDCETDGIRGNSQTI 238

Query: 244 TVENLMKKTDD----YELAAIDAIAAAAHSLVIAIGIFRG-------------------- 279
           T +N++    D    Y+L A++    ++ S +    I R                     
Sbjct: 239 TTQNIVLSWLDSLPIYDLVALEKAVLSSKSFLCGAAIVRSNASDSQIQSELYQVNKANEA 298

Query: 280 ---KLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATV 324
              K  +EE +E+  LE   Q  +WG VE  HD+D AD    +SSA +
Sbjct: 299 EYFKKSVEEIVEMGNLETIFQTQEWGEVEDTHDVDNADWLRSLSSAAL 346


>gi|444323980|ref|XP_004182630.1| hypothetical protein TBLA_0J01130 [Tetrapisispora blattae CBS 6284]
 gi|387515678|emb|CCH63111.1| hypothetical protein TBLA_0J01130 [Tetrapisispora blattae CBS 6284]
          Length = 292

 Score = 47.4 bits (111), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 57/260 (21%), Positives = 99/260 (38%), Gaps = 30/260 (11%)

Query: 94  KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLG--LAKAIGAEWDY---QQT 148
           +  ++ VS    D  +   + LD RT++TP   PL+ P     LA  +  EW     + T
Sbjct: 30  RSLWKTVSVSPIDGTSQVALQLDGRTVRTPGGLPLEFPDTHTVLASMLQREWQAVTEKAT 89

Query: 149 DGIRPF--------MMPLMKLA--CTALERVPLTRPKIIEHLMKKFNQDLVFCRAPADND 198
            G  P          +PL  L   C  L+  P  R    + L+   + D +   +P  N+
Sbjct: 90  KGKGPGNWKKLQRENLPLTSLVGRCLGLQMSPKDRNAAKKSLIPFIDTDTLVVMSP-QNE 148

Query: 199 LTSGVHERQVQKIDPLLKWVESEFG--FKP---------VVYSSFFG---GKQEDGLIKT 244
           L   +  RQ +     +K  E  F   F P         ++ +   G    KQ   +   
Sbjct: 149 LDGVLRSRQEELYPKFVKLTEDLFSKDFNPEGSAPLRLSILDTETHGIRPHKQSQPVTDA 208

Query: 245 VENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLV 304
             N +     + LA ++    A  S +  I + +    +++  EL  LE   Q ++WG +
Sbjct: 209 AVNYLDSLTPWNLAVMEHTVVATKSFLCGILLLQSWAPVKDIAELSLLEAICQAERWGSI 268

Query: 305 EGGHDIDIADLRVQISSATV 324
              H+ +   L   +  A +
Sbjct: 269 PESHERERLQLEQSLHCAAL 288


>gi|392902198|ref|NP_001255921.1| Protein Y116A8C.27, isoform b [Caenorhabditis elegans]
 gi|290457488|emb|CBK19483.1| Protein Y116A8C.27, isoform b [Caenorhabditis elegans]
          Length = 181

 Score = 46.6 bits (109), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 33/139 (23%), Positives = 64/139 (46%), Gaps = 5/139 (3%)

Query: 197 NDLTSGVHERQVQKIDPLLKWVESEFGFKPVVYSSFFG---GKQEDGLIKTVENLMKKTD 253
           N  +S +H  Q +K  PL+K + ++ G K     +        + D   + ++  +++ +
Sbjct: 39  NTESSKLHRYQEEKWAPLIKNLNNDLGIKVRPSENILDCDVASENDK--EKIDRWIRQHN 96

Query: 254 DYELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIA 313
              L  +     +  S VIA    R  +  + AI+   LE+  Q + WG VE  H I+  
Sbjct: 97  FPALVGLQYATESVKSFVIAYNAIRHHIDPDTAIDAATLEQRTQAETWGNVEWAHGIERE 156

Query: 314 DLRVQISSATVFLGLSRRN 332
           +L  ++S+A +F+  +  N
Sbjct: 157 ELMTRLSAACLFVYFNSNN 175


>gi|115385390|ref|XP_001209242.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114196934|gb|EAU38634.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 227

 Score = 45.8 bits (107), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 73/178 (41%), Gaps = 32/178 (17%)

Query: 181 MKKFNQDLVFCRAPADN-------------DLTSGVHERQVQKIDPLLKWVESEF----G 223
           M+    D + C  P  N             D    + E QV+    ++ ++ ++      
Sbjct: 45  MRYLETDTLLCWVPEKNAYAVEDADADGAGDKRESLREMQVRVASDIIAFLSTKVWPGVD 104

Query: 224 FKPVVYS-SFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGI------ 276
            KP++ + S     Q       ++  +     Y+LAA++    A+ SL++A+ +      
Sbjct: 105 IKPILDADSILPVSQSQATKDIIKQWISGLQAYDLAALERGILASKSLLVAVRLVVEWSE 164

Query: 277 -FR-------GKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFL 326
            FR        +  IEEA E   LE   Q D WG VE  HD+D  DL+ Q+ S  V +
Sbjct: 165 NFRHVQRPGQKRFGIEEAAEASSLEVKWQTDMWGEVEDTHDVDKEDLKRQLGSVIVVV 222


>gi|145508878|ref|XP_001440383.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124407600|emb|CAK72986.1| unnamed protein product [Paramecium tetraurelia]
          Length = 267

 Score = 45.8 bits (107), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 50/206 (24%), Positives = 102/206 (49%), Gaps = 11/206 (5%)

Query: 94  KRFYEKVSTREA----DDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTD 149
           KR Y++ +   A    +  + W + LD ++ KT  +  L +P+  LA  I +E++ +Q +
Sbjct: 23  KRSYKEATVEMAINPINPYHQWFIKLDGKSAKTQQRNILAVPSPQLAACIASEFN-RQKE 81

Query: 150 GIRPFMMPLMKLACTA--LERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQ 207
            +    MPL+ LA  A  L+     R  I + ++     D++  R     +  S + + Q
Sbjct: 82  YLSFKQMPLLMLARNAIDLDYDATNREYIEKAIVNHLENDVILHRK----NQKSQLLQIQ 137

Query: 208 VQKIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAA 267
            Q++DP L++  S+FG           G      I  +E+L++  ++++L ++ + A   
Sbjct: 138 QQQLDPQLRFFNSKFGMDIQSNDGVQIGSLSQQNIVKIESLIRGLNNWQLVSLSSQADNL 197

Query: 268 HSLVIAIGIFRGKLQIEEAIELIRLE 293
            S ++AI +  G++ +E+A+ L  +E
Sbjct: 198 KSCILAIQLSYGQVDLEKALSLCDIE 223


>gi|428672182|gb|EKX73096.1| conserved hypothetical protein [Babesia equi]
          Length = 296

 Score = 45.4 bits (106), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 51/221 (23%), Positives = 89/221 (40%), Gaps = 18/221 (8%)

Query: 101 STREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRPFMMPLMK 160
           S   AD  + + ++LD + L TP    +   +  LA  I  EW+ Q     R   +PL  
Sbjct: 50  SVEIADYEDKFCILLDGKLLSTPFGNDIVTHSRELANHIKLEWEAQIDKLTRFGTVPLTL 109

Query: 161 LACTALERVPLTRPKIIEHLMKKFNQD--LVFCRA-PADNDLTSGVHERQVQKIDPL-LK 216
           L    L+    ++   I  L+     D  L + R  P D      + E  + +I PL LK
Sbjct: 110 LLSRTLDFSDYSKGTHIVDLLDSLQTDTLLFYERCEPIDLPDLGSLSEDVLSQIRPLDLK 169

Query: 217 WVES------------EFGFKPVVYSSFFGGK--QEDGLIKTVENLMKKTDDYELAAIDA 262
            ++S             F  +P+V S        Q D  +K + N +   ++  +  +  
Sbjct: 170 VLQSSIINRLLDLFATHFRLEPIVISDTISKCPVQSDATLKVLHNTLYSLENPHIITVLH 229

Query: 263 IAAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGL 303
           +     SL++ + +    +   +A+   RLEE L+   WG+
Sbjct: 230 LQKCLKSLILPLMLIHKMVTPTDALRASRLEETLEAANWGV 270


>gi|145513454|ref|XP_001442638.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124409991|emb|CAK75241.1| unnamed protein product [Paramecium tetraurelia]
          Length = 256

 Score = 45.1 bits (105), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 47/212 (22%), Positives = 99/212 (46%), Gaps = 17/212 (8%)

Query: 87  MTGSIVGKRFYEKVSTREADD----GNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAE 142
           +   I  KR Y++ S   A +     + W + LD +++KT  +  L +P+  LA  I +E
Sbjct: 8   IQSQISIKRCYKEASIEMASNPANPFHQWIIKLDGKSIKTQKRNILAVPSPQLASYIASE 67

Query: 143 WDYQQTDGIRPFMMPLMKLACTA--LERVPLTRPKIIEHLMKKFNQDLVFCRAPADNDLT 200
           ++  Q   +    M L  LA  A  L+    +R  +    +  F  D++  R  + + L 
Sbjct: 68  FN-NQNKNMSLLSMQLFLLASHAVDLDFDASSRDIMEMSFIGNFENDVILKRHQSQDKLL 126

Query: 201 SGVHERQVQKIDPLLKWVESEFGFKPVVYSSFFGGKQE--DGLIKT-VENLMKKTDDYEL 257
               +++ Q  +PL+  +  +F    V  SS     QE  + L K  +E+ +++ ++++L
Sbjct: 127 ----QKESQTFEPLIAQLNRKFN---VEISSKDNRNQEFLNQLSKIKLESFIREMNNWQL 179

Query: 258 AAIDAIAAAAHSLVIAIGIFRGKLQIEEAIEL 289
            ++++      S ++ + +  G + I +A+ L
Sbjct: 180 VSLNSKIENLESCILGLNLQLGSIDITKALAL 211


>gi|357622890|gb|EHJ74250.1| putative ATP synthase mitochondrial F1 complex assembly factor 2
           [Danaus plexippus]
          Length = 185

 Score = 44.7 bits (104), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 29/120 (24%), Positives = 55/120 (45%)

Query: 207 QVQKIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAA 266
           Q +K +P+L+W    FG    V                +       D   L A++    A
Sbjct: 48  QEKKWEPVLEWFCKRFGVTQEVSKDLELPPIRAETRAVLARHFLSYDFPSLTALNFGVEA 107

Query: 267 AHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFL 326
             S ++ +      L+ ++A+ L RLEE+ QV +WG V   H+++ A+L  ++S++ + +
Sbjct: 108 LKSPILMLACVERHLEPKDAVMLARLEEEYQVSRWGRVPWAHELNQAELTARVSASLLVI 167


>gi|225680589|gb|EEH18873.1| autophagy-related protein 12 [Paracoccidioides brasiliensis Pb03]
          Length = 322

 Score = 44.7 bits (104), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 41/87 (47%), Gaps = 15/87 (17%)

Query: 255 YELAAIDAIAAAAHSLVIAIGIF--------------RGKLQIEEAIELIRLEEDLQVDK 300
           YELA ++    A+ SL++A                  R +  IE+A E   LE   Q  K
Sbjct: 233 YELAGLERAVLASKSLLVAARFIVEWSEEFRNLQPEGRREFGIEKAAEASTLEVTWQTGK 292

Query: 301 WGLVEGGHDIDIADLRVQISSATVFLG 327
           WG VE  HD+D  D+R Q+ S  V LG
Sbjct: 293 WGEVEDTHDVDREDVRRQLGSV-VLLG 318


>gi|77557044|gb|ABA99840.1| hypothetical protein LOC_Os12g41320 [Oryza sativa Japonica Group]
 gi|125580006|gb|EAZ21152.1| hypothetical protein OsJ_36800 [Oryza sativa Japonica Group]
          Length = 144

 Score = 43.1 bits (100), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 22/49 (44%), Positives = 27/49 (55%)

Query: 61  ESIYIKGRKQETASSSSSSVTMPMSFMTGSIVGKRFYEKVSTREADDGN 109
           + IY+K      A+   + V M MSFMT S+VGK FY K   R  DD N
Sbjct: 36  DEIYVKKPVAAAATQDETLVAMLMSFMTRSVVGKWFYRKAPVRRTDDRN 84


>gi|153868759|ref|ZP_01998506.1| Cation transport ATPase [Beggiatoa sp. PS]
 gi|152074670|gb|EDN71504.1| Cation transport ATPase [Beggiatoa sp. PS]
          Length = 677

 Score = 42.7 bits (99), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 27/106 (25%), Positives = 51/106 (48%), Gaps = 2/106 (1%)

Query: 73  ASSSSSSVTMPMS--FMTGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKL 130
           A+++   +T P++      ++  +    KV+  E   G G TV ++ + ++  S R +KL
Sbjct: 389 AAAAERKLTHPIAQAIFNKAVTSQLTLPKVADSEYKMGYGITVNIEGKIIQVGSARFMKL 448

Query: 131 PTLGLAKAIGAEWDYQQTDGIRPFMMPLMKLACTALERVPLTRPKI 176
             + +  +I AE  Y    G    M+ + K  C A+E  P  RP++
Sbjct: 449 ENITIPTSIMAEMVYSHDQGYSFVMVAIDKQLCGAIEIQPTIRPEV 494


>gi|116193335|ref|XP_001222480.1| hypothetical protein CHGG_06385 [Chaetomium globosum CBS 148.51]
 gi|88182298|gb|EAQ89766.1| hypothetical protein CHGG_06385 [Chaetomium globosum CBS 148.51]
          Length = 207

 Score = 42.7 bits (99), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 19/44 (43%), Positives = 27/44 (61%)

Query: 283 IEEAIELIRLEEDLQVDKWGLVEGGHDIDIADLRVQISSATVFL 326
           +EEA   + LE + Q  KWG VE  HD++  DLR Q+ SA + +
Sbjct: 152 VEEAARAVSLEVEWQTKKWGEVEDTHDVEKEDLRRQLGSAVLLV 195


>gi|402835841|ref|ZP_10884397.1| cyclic nucleotide-binding domain protein [Mogibacterium sp. CM50]
 gi|402273074|gb|EJU22283.1| cyclic nucleotide-binding domain protein [Mogibacterium sp. CM50]
          Length = 226

 Score = 42.4 bits (98), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 61/146 (41%), Gaps = 20/146 (13%)

Query: 51  TFSSPSDKINESIYIKGRKQ----ETASSSSSSVTMPMSFMTGSIVGKRFYEKVSTRE-- 104
           TFSS  D   + +   G+K+      A+  +  V +P  FMTG+ V    Y K  T    
Sbjct: 75  TFSSTGDIFGDILLFLGKKEYGVFAQATCETRIVVLPRDFMTGTCVNGCDYHKQLTSNLL 134

Query: 105 -ADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRPFMMPLMKLAC 163
               GN + + +  R L  P+ R        +AK +     Y   D  +P  M   +LA 
Sbjct: 135 MIFAGNAYALNMRLRILSCPTLRQ------KIAKMLSI---YNDRDMTKPIDMTREELA- 184

Query: 164 TALERVPLTRPKIIEHLMKKFNQDLV 189
              E + +TRP I   LMK  +  LV
Sbjct: 185 ---EFLGVTRPSISRELMKMQDDGLV 207


>gi|218187211|gb|EEC69638.1| hypothetical protein OsI_39034 [Oryza sativa Indica Group]
          Length = 144

 Score = 41.6 bits (96), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 21/47 (44%), Positives = 26/47 (55%)

Query: 63  IYIKGRKQETASSSSSSVTMPMSFMTGSIVGKRFYEKVSTREADDGN 109
           IY+K      A+   + V M MSFMT S++GK FY K   R  DD N
Sbjct: 38  IYVKKPVPAAATQDETLVAMLMSFMTSSLLGKWFYRKAPVRRTDDRN 84


>gi|181339609|ref|NP_001116712.1| solute carrier family 8 (sodium/calcium exchanger), member 4b
           precursor [Danio rerio]
 gi|171222394|gb|ACB45520.1| sodium/calcium exchanger 4 isoform b [Danio rerio]
          Length = 925

 Score = 40.4 bits (93), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 22/62 (35%), Positives = 32/62 (51%)

Query: 42  YDDDPTSSFTFSSPSDKINESIYIKGRKQETASSSSSSVTMPMSFMTGSIVGKRFYEKVS 101
           YDDD    FTF S S +++ESI I   K +  S +     +P   + G+  G   YE+VS
Sbjct: 528 YDDDHAGIFTFESESMRVSESIGIMQVKVQRTSGARGLAAVPYQTVEGTACGGEDYEEVS 587

Query: 102 TR 103
            +
Sbjct: 588 GK 589


>gi|344229006|gb|EGV60892.1| ATP12-domain-containing protein [Candida tenuis ATCC 10573]
          Length = 356

 Score = 39.3 bits (90), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 2/75 (2%)

Query: 95  RFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLP--TLGLAKAIGAEWDYQQTDGIR 152
           +F++KV T   +D   + + LD +TLKTP   PL LP      A  I  EW       I+
Sbjct: 65  KFWDKVDTSYNEDIKKYEIQLDGKTLKTPLGFPLALPEDKKYFAHLIQHEWSNLPNLKIQ 124

Query: 153 PFMMPLMKLACTALE 167
              MPL  +A  +++
Sbjct: 125 TNSMPLTSIAARSID 139


>gi|344229005|gb|EGV60891.1| hypothetical protein CANTEDRAFT_132534 [Candida tenuis ATCC 10573]
          Length = 368

 Score = 39.3 bits (90), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 2/75 (2%)

Query: 95  RFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLP--TLGLAKAIGAEWDYQQTDGIR 152
           +F++KV T   +D   + + LD +TLKTP   PL LP      A  I  EW       I+
Sbjct: 77  KFWDKVDTSYNEDIKKYEIQLDGKTLKTPLGFPLALPEDKKYFAHLIQHEWSNLPNLKIQ 136

Query: 153 PFMMPLMKLACTALE 167
              MPL  +A  +++
Sbjct: 137 TNSMPLTSIAARSID 151


>gi|414586974|tpg|DAA37545.1| TPA: hypothetical protein ZEAMMB73_530098 [Zea mays]
          Length = 191

 Score = 38.1 bits (87), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 53/122 (43%), Gaps = 21/122 (17%)

Query: 194 PADNDLTSGVHERQVQKIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTD 253
           PA N   SG +   V KI P +KWV     F   +Y  F          + +E+ ++KT 
Sbjct: 76  PAANPSPSGGNNLPVPKIPPWVKWVAGAVIFAVPMYRRF----------RALEDKIEKTA 125

Query: 254 DYELAAIDAIAAAAHSLVIAIG-IFRGKLQIEEAIELIR-----LEEDLQ-----VDKWG 302
           +  +  ID +A A   +   +   F G   I+EA   I+     +EED       ++K G
Sbjct: 126 EVAIEVIDKVAEATEKVAGEVADEFPGNESIKEAASRIKKVMHVVEEDADKAEALIEKVG 185

Query: 303 LV 304
           LV
Sbjct: 186 LV 187


>gi|255012661|ref|ZP_05284787.1| DNA polymerase III alpha subunit [Bacteroides sp. 2_1_7]
 gi|410102414|ref|ZP_11297341.1| DNA polymerase III, alpha subunit [Parabacteroides sp. D25]
 gi|409239136|gb|EKN31924.1| DNA polymerase III, alpha subunit [Parabacteroides sp. D25]
          Length = 1281

 Score = 38.1 bits (87), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 14/51 (27%), Positives = 31/51 (60%)

Query: 173 RPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDPLLKWVESEFG 223
           RP+I + L++K+++DL+ C A    ++   +   ++ K +  +KW ++ FG
Sbjct: 177 RPRIDKELLEKYHEDLIICSACLGGEIPQHIMHGRIDKAEESIKWFKNLFG 227


>gi|423333511|ref|ZP_17311292.1| DNA polymerase III, alpha subunit [Parabacteroides distasonis
           CL03T12C09]
 gi|409227459|gb|EKN20356.1| DNA polymerase III, alpha subunit [Parabacteroides distasonis
           CL03T12C09]
          Length = 1281

 Score = 38.1 bits (87), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 14/51 (27%), Positives = 31/51 (60%)

Query: 173 RPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDPLLKWVESEFG 223
           RP+I + L++K+++DL+ C A    ++   +   ++ K +  +KW ++ FG
Sbjct: 177 RPRIDKELLEKYHEDLIICSACLGGEIPQHIMHGRIDKAEESIKWFKNLFG 227


>gi|256838875|ref|ZP_05544385.1| DNA polymerase III alpha subunit [Parabacteroides sp. D13]
 gi|256739794|gb|EEU53118.1| DNA polymerase III alpha subunit [Parabacteroides sp. D13]
          Length = 1267

 Score = 38.1 bits (87), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 14/51 (27%), Positives = 31/51 (60%)

Query: 173 RPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDPLLKWVESEFG 223
           RP+I + L++K+++DL+ C A    ++   +   ++ K +  +KW ++ FG
Sbjct: 163 RPRIDKELLEKYHEDLIICSACLGGEIPQHIMHGRIDKAEESIKWFKNLFG 213


>gi|150010065|ref|YP_001304808.1| DNA polymerase III subunit alpha [Parabacteroides distasonis ATCC
           8503]
 gi|262382633|ref|ZP_06075770.1| DNA polymerase III alpha subunit [Bacteroides sp. 2_1_33B]
 gi|298374425|ref|ZP_06984383.1| DNA polymerase III, alpha subunit [Bacteroides sp. 3_1_19]
 gi|149938489|gb|ABR45186.1| DNA polymerase III alpha subunit [Parabacteroides distasonis ATCC
           8503]
 gi|262295511|gb|EEY83442.1| DNA polymerase III alpha subunit [Bacteroides sp. 2_1_33B]
 gi|298268793|gb|EFI10448.1| DNA polymerase III, alpha subunit [Bacteroides sp. 3_1_19]
          Length = 1267

 Score = 38.1 bits (87), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 14/51 (27%), Positives = 31/51 (60%)

Query: 173 RPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDPLLKWVESEFG 223
           RP+I + L++K+++DL+ C A    ++   +   ++ K +  +KW ++ FG
Sbjct: 163 RPRIDKELLEKYHEDLIICSACLGGEIPQHIMHGRIDKAEESIKWFKNLFG 213


>gi|423339761|ref|ZP_17317501.1| DNA polymerase III, alpha subunit [Parabacteroides distasonis
           CL09T03C24]
 gi|409229464|gb|EKN22340.1| DNA polymerase III, alpha subunit [Parabacteroides distasonis
           CL09T03C24]
          Length = 1281

 Score = 37.7 bits (86), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 14/51 (27%), Positives = 31/51 (60%)

Query: 173 RPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDPLLKWVESEFG 223
           RP+I + L++K+++DL+ C A    ++   +   ++ K +  +KW ++ FG
Sbjct: 177 RPRIDKELLEKYHKDLIICSACLGGEIPQHIMHGRIDKAEESIKWFKNLFG 227


>gi|301308097|ref|ZP_07214051.1| DNA polymerase III, alpha subunit [Bacteroides sp. 20_3]
 gi|300833567|gb|EFK64183.1| DNA polymerase III, alpha subunit [Bacteroides sp. 20_3]
          Length = 1267

 Score = 37.7 bits (86), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 14/51 (27%), Positives = 31/51 (60%)

Query: 173 RPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDPLLKWVESEFG 223
           RP+I + L++K+++DL+ C A    ++   +   ++ K +  +KW ++ FG
Sbjct: 163 RPRIDKELLEKYHKDLIICSACLGGEIPQHIMHGRIDKAEESIKWFKNLFG 213


>gi|148226376|ref|NP_001082888.1| solute carrier family 8 (sodium/calcium exchanger), member 4a
           precursor [Danio rerio]
 gi|143635017|gb|ABO93326.1| Ncx4a [Danio rerio]
 gi|171222392|gb|ACB45519.1| sodium/calcium exchanger 4 isoform a [Danio rerio]
          Length = 939

 Score = 37.4 bits (85), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 6/98 (6%)

Query: 12  SIRNPNAIS-SFTTFRTRHL---CSVATVHQSPQ--YDDDPTSSFTFSSPSDKINESIYI 65
           SI +PNA+S   +   + H+    ++   H +    YDDD    FTF S S +++ES+ I
Sbjct: 506 SILDPNAVSPGNSIIGSSHVPPKAALGNAHSATVTIYDDDHAGIFTFESNSTRVSESVGI 565

Query: 66  KGRKQETASSSSSSVTMPMSFMTGSIVGKRFYEKVSTR 103
              K    S +   V +P     G+      Y++V+ +
Sbjct: 566 MQVKVHRTSGARGKVAVPYHTTEGTAKAGEDYDEVAGK 603


>gi|190338724|gb|AAI63335.1| Solute carrier family 8 (sodium/calcium exchanger), member 4a
           [Danio rerio]
          Length = 939

 Score = 37.4 bits (85), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 6/98 (6%)

Query: 12  SIRNPNAIS-SFTTFRTRHL---CSVATVHQSPQ--YDDDPTSSFTFSSPSDKINESIYI 65
           SI +PNA+S   +   + H+    ++   H +    YDDD    FTF S S +++ES+ I
Sbjct: 506 SILDPNAVSPGNSIIGSSHVPPKAALGNAHSATVTIYDDDHAGIFTFESNSTRVSESVGI 565

Query: 66  KGRKQETASSSSSSVTMPMSFMTGSIVGKRFYEKVSTR 103
              K    S +   V +P     G+      Y++V+ +
Sbjct: 566 MQVKVHRTSGARGKVAVPYHTTEGTAKAGEDYDEVAGK 603


>gi|156083417|ref|XP_001609192.1| hypothetical protein [Babesia bovis T2Bo]
 gi|154796443|gb|EDO05624.1| hypothetical protein BBOV_IV000240 [Babesia bovis]
          Length = 227

 Score = 37.4 bits (85), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 21/93 (22%), Positives = 46/93 (49%), Gaps = 2/93 (2%)

Query: 213 PLLKWVESEFGFKPVVYSSFFGG--KQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSL 270
           P+L+      G  P+ +S+      +Q   ++K +E+++     +EL  ++ +     S+
Sbjct: 105 PILEKFAKIRGTSPLAHSASLTTELQQPPDVLKHIEHMLHSMPLHELVTMNNVHKRLKSV 164

Query: 271 VIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGL 303
           ++ + +  G +   +A+   RLEE LQ   WG+
Sbjct: 165 ILPMELLDGVIGATQALRASRLEETLQAASWGI 197


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.318    0.133    0.385 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,148,351,906
Number of Sequences: 23463169
Number of extensions: 216076988
Number of successful extensions: 548114
Number of sequences better than 100.0: 706
Number of HSP's better than 100.0 without gapping: 532
Number of HSP's successfully gapped in prelim test: 174
Number of HSP's that attempted gapping in prelim test: 546376
Number of HSP's gapped (non-prelim): 750
length of query: 332
length of database: 8,064,228,071
effective HSP length: 143
effective length of query: 189
effective length of database: 9,003,962,200
effective search space: 1701748855800
effective search space used: 1701748855800
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 77 (34.3 bits)