Query 020035
Match_columns 332
No_of_seqs 123 out of 408
Neff 5.1
Searched_HMMs 46136
Date Fri Mar 29 06:30:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020035.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020035hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3015 F1-ATP synthase assemb 100.0 2E-75 4.3E-80 545.8 24.2 261 62-332 22-283 (283)
2 COG5387 Chaperone required for 100.0 7.4E-65 1.6E-69 467.5 19.5 229 90-324 29-259 (264)
3 PF07542 ATP12: ATP12 chaperon 100.0 1.2E-49 2.5E-54 338.1 9.7 122 94-222 1-122 (122)
4 PF06236 MelC1: Tyrosinase co- 35.2 18 0.00038 31.5 0.9 44 108-154 68-122 (125)
5 PF11469 Ribonucleas_3_2: Ribo 25.7 67 0.0015 27.4 2.8 21 270-290 64-84 (120)
6 PF01950 FBPase_3: Fructose-1, 19.6 52 0.0011 33.1 1.1 75 81-166 272-350 (363)
7 TIGR02500 type_III_yscD type I 18.7 1.3E+02 0.0029 30.4 3.9 55 171-225 280-335 (410)
8 KOG3831 Uncharacterized conser 18.7 43 0.00093 30.4 0.3 22 173-194 146-167 (196)
9 PF09862 DUF2089: Protein of u 18.5 2E+02 0.0044 24.5 4.3 59 216-289 53-111 (113)
10 PTZ00242 protein tyrosine phos 17.4 85 0.0018 27.9 1.9 25 266-290 111-135 (166)
No 1
>KOG3015 consensus F1-ATP synthase assembly protein [Energy production and conversion]
Probab=100.00 E-value=2e-75 Score=545.79 Aligned_cols=261 Identities=37% Similarity=0.614 Sum_probs=242.0
Q ss_pred ceeecCCCCCCCCCCCCccccccccCCCCCCcCcccceeeeeEeCCCCCEEEEeCCCcCCCCCCCceeeCcHHHHHHHHH
Q 020035 62 SIYIKGRKQETASSSSSSVTMPMSFMTGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGA 141 (332)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~KRFyK~V~V~~~~~~~g~~V~LDgR~LKTP~~~~L~vPs~~LA~aIA~ 141 (332)
+++...|.|.... .+.++.+| +.|||||+|++...++++||.|.||||++|||.|+++.|||+.||++||.
T Consensus 22 ~~fs~~~~p~~~~-~a~~~~~P--------t~krF~kkvs~~~g~~~g~~~v~LD~R~lKTP~g~~f~v~s~~LA~~ia~ 92 (283)
T KOG3015|consen 22 PMFSLCPGPLSTA-IAREYASP--------TSKRFYKKVSTLTGDAFGGQEVQLDGRTLKTPKGNPFKVRSEKLAIAIAL 92 (283)
T ss_pred cceecCCCccccc-cccccCCC--------cHHHHHhhhhheecccCCceEEecccccccCCCCCeeecccHHHHHHHHH
Confidence 3444444444333 44445444 27999999999998877899999999999999999999999999999999
Q ss_pred HhccccCCCccCCCCchhHHHhHhhcCC-CCChHHHHHHHHhhcCCceEeEecCCCCCcchHHHHHHHhhhhHHHHHHHH
Q 020035 142 EWDYQQTDGIRPFMMPLMKLACTALERV-PLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDPLLKWVES 220 (332)
Q Consensus 142 EW~~~Q~e~I~p~tMPLT~La~tAID~~-~~~r~~ii~~Ll~Yl~tDtvcyra~~p~~L~~~L~~~Q~e~WdPll~W~~~ 220 (332)
||++++.+.|+||+||||+||+||||++ +.+++.++++|++|++|||||||+++++.| +.|++.|.|.|+|||+||++
T Consensus 93 Ewdsq~s~~i~~~~mplt~L~~taid~~~~~~kd~i~~~llrfldtDTvlf~~pe~e~l-~~l~~~Q~e~w~Plie~~e~ 171 (283)
T KOG3015|consen 93 EWDSQKSTSIRPFTMPLTSLVFTAIDNPSELNKDTISNQLLRFLDTDTVLFFSPESEDL-GRLRDLQVEEWDPLIEWFEN 171 (283)
T ss_pred HHhhcccccccccccHHHHHHHHHhhccCcccHHHHHHHHHHHhccCeEEEecCChhhh-hHHHHHHHHhhHHHHHHHHH
Confidence 9997777999999999999999999995 799999999999999999999999999777 58889999999999999999
Q ss_pred HhCCcccccCCccCCCCCHHHHHHHHHHHhCCCchhHHHHHHHHHHhhHHHHHHHHHcCCCCHHHHHHHhhhhHHHHhhh
Q 020035 221 EFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDK 300 (332)
Q Consensus 221 ~fgv~l~~t~gi~~~~Q~~~t~~~l~~~L~sld~w~Laal~~av~~~kSlilaLAl~~g~l~~e~A~~aarLEE~~Q~e~ 300 (332)
+||+++.++++|++++|++.+++++++||.++|+|+|+||++++..+||||||+++++|++++|+|+.+|||||+||+++
T Consensus 172 ~lgvkl~~~~~I~~~~q~e~~ke~i~~~l~s~n~w~Lagle~~v~s~KSfVia~~ii~~~l~~d~Av~larLEe~yQvek 251 (283)
T KOG3015|consen 172 RLGVKLQPSDNILGGKQAEKDKEAIDKWLSSLNFWALAGLEFAVASLKSFVIALGIIEGKLDVDKAVALARLEEEYQVEK 251 (283)
T ss_pred HhCcceeecccccCCcccHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCcchhhHHHHHHHhhHHHHHHHhhhcC
Q 020035 301 WGLVEGGHDIDIADLRVQISSATVFLGLSRRN 332 (332)
Q Consensus 301 WG~VE~~HDvd~adl~~~L~AA~lf~~l~r~~ 332 (332)
||+|||+||++++++++++++|.+|++|+++|
T Consensus 252 WG~VEwaHdi~~~eL~~r~~aa~lf~~l~~~~ 283 (283)
T KOG3015|consen 252 WGNVEWAHDIEKQELRARLSAATLFVHLNSEN 283 (283)
T ss_pred HhcccccchhhHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999875
No 2
>COG5387 Chaperone required for the assembly of the mitochondrial F1-ATPase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=7.4e-65 Score=467.51 Aligned_cols=229 Identities=29% Similarity=0.545 Sum_probs=217.9
Q ss_pred CCCcCcccceeeeeEeCCCCCEEEEeCCCcCCCCCCCceeeCcHHHHHHHHHHhccccCCCccCCCCchhHHHhHhhcCC
Q 020035 90 SIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRPFMMPLMKLACTALERV 169 (332)
Q Consensus 90 ~~~~KRFyK~V~V~~~~~~~g~~V~LDgR~LKTP~~~~L~vPs~~LA~aIA~EW~~~Q~e~I~p~tMPLT~La~tAID~~ 169 (332)
.+.+|||||++++.+.++ |||.|+||||++|||.|++|+||++.||+.||.||+ .|.+.|+||.||+|+|++||||++
T Consensus 29 ~plpkrfyk~a~aa~ve~-Gg~aiqLDGR~~KtPa~k~l~vpt~~LA~lla~EWd-aqs~~I~~~~mP~TrlV~taID~i 106 (264)
T COG5387 29 KPLPKRFYKKATAADVEK-GGFAIQLDGRTLKTPAGKPLVVPTEALAYLLALEWD-AQSESIDPHSMPLTRLVNTAIDGI 106 (264)
T ss_pred CcchHHHHHHhhcCcccc-CceEEEeCCCCCCCCCCCceeCcHHHHHHHHHHHhh-cchhccCcccCcHHHHHHHHHHhh
Confidence 355899999999999876 479999999999999999999999999999999999 999999999999999999999999
Q ss_pred CCChHHHHHHHHhhcCCceEeEecCCCCCcchHHHHHHHhhhhHHHHHHHHHhCCcccccCCccCCCCCHHHHHHHHHHH
Q 020035 170 PLTRPKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDPLLKWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLM 249 (332)
Q Consensus 170 ~~~r~~ii~~Ll~Yl~tDtvcyra~~p~~L~~~L~~~Q~e~WdPll~W~~~~fgv~l~~t~gi~~~~Q~~~t~~~l~~~L 249 (332)
..+++.+.++|++|++||++|||++.|.+ |+++|++.|+||++|+++.+|+.+...+|+++.+||.+++++++.++
T Consensus 107 a~~~~~v~~~ilrf~~tDlLcYra~sp~e----Lv~rQ~e~w~Piidw~e~~lg~rf~~vdgvih~~Qp~E~va~~a~~l 182 (264)
T COG5387 107 AEDSQAVFEQILRFLDTDLLCYRAESPFE----LVERQNENWDPIIDWAENFLGARFILVDGVIHGEQPREAVAAFAVKL 182 (264)
T ss_pred cccHHHHHHHHHHHccCCeeEecCCCHHH----HHHHHHhhhHHHHHHHHHhhCceEEeehhhhcCCCcHHHHHHHHHHH
Confidence 99999999999999999999999999855 69999999999999999999999999999999999999999999999
Q ss_pred hCCC-chhHHHHHHHHHHhhHHHHHHHHHcCCCCHHHHHHHhhhhHHHHhhhhc-CCCCcchhhHHHHHHHhhHHHH
Q 020035 250 KKTD-DYELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIELIRLEEDLQVDKWG-LVEGGHDIDIADLRVQISSATV 324 (332)
Q Consensus 250 ~sld-~w~Laal~~av~~~kSlilaLAl~~g~l~~e~A~~aarLEE~~Q~e~WG-~VE~~HDvd~adl~~~L~AA~l 324 (332)
.+++ ||.|++|+.+|..+||+|||+++..|+++.|+||.+++|||+||+|+|| .+|+.||.+..++++.+.+..+
T Consensus 183 ~s~~sp~~LA~l~~~~sl~gS~Il~lal~~g~l~~e~a~ala~lde~~q~EqWG~d~Ea~~r~~~r~i~~~i~~r~i 259 (264)
T COG5387 183 MSLDSPWALAALETMVSLTGSFILALALLEGELSAEKAWALAHLDEDWQAEQWGSDEEATERRKNRLIEMAIAARVI 259 (264)
T ss_pred hhcCCHHHHHHHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHhHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHH
Confidence 9986 5999999999999999999999999999999999999999999999999 7888899998888888776653
No 3
>PF07542 ATP12: ATP12 chaperone protein; InterPro: IPR011419 This entry represents a group of ATPase F1F0-assembly proteins, including ATP12 and ATPAF2 (ATP synthase mitochondrial F1 complex assembly factor 2). These proteins are essential for the assembly of the mitochondrial F1-F0 complex. Mitochondrial F1-ATPase is an oligomeric enzyme composed of five distinct subunit polypeptides. The alpha and beta subunits make up the bulk of protein mass of F1. In Saccharomyces cerevisiae both subunits are synthesised as precursors with N-terminal targeting signals that are removed upon translocation of the proteins to the matrix compartment []. These proteins include examples from eukaryotes and bacteria and may have chaperone activity, being involved in F1 ATPase complex assembly. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0043461 proton-transporting ATP synthase complex assembly; PDB: 2R6I_B 2ZD2_B 2P4X_B 2R31_A.
Probab=100.00 E-value=1.2e-49 Score=338.10 Aligned_cols=122 Identities=46% Similarity=0.794 Sum_probs=102.7
Q ss_pred CcccceeeeeEeCCCCCEEEEeCCCcCCCCCCCceeeCcHHHHHHHHHHhccccCCCccCCCCchhHHHhHhhcCCCCCh
Q 020035 94 KRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAIGAEWDYQQTDGIRPFMMPLMKLACTALERVPLTR 173 (332)
Q Consensus 94 KRFyK~V~V~~~~~~~g~~V~LDgR~LKTP~~~~L~vPs~~LA~aIA~EW~~~Q~e~I~p~tMPLT~La~tAID~~~~~r 173 (332)
|||||+|+|.+.++ ||+|+||||+||||+|++|+|||++||++||+||+ +|++.|+|++||||+||+||||+++.+|
T Consensus 1 KRFyk~v~v~~~~~--g~~V~LDgR~lkTP~~~~l~vps~~LA~avA~EW~-~Q~~~i~p~~MPLT~L~~taiD~~~~~r 77 (122)
T PF07542_consen 1 KRFYKEVSVEENDG--GFQVLLDGRPLKTPAGNPLVVPSEALAEAVAAEWD-AQGEYIKPHTMPLTSLANTAIDRVAEDR 77 (122)
T ss_dssp B---S-EEEEEETT--SEEEEETTEE-BETTSEB--BSSHHHHHHHHHHHH-T-SSB--GGG-HHHHHHHHHHHTTCCCH
T ss_pred CCCcceeeEEecCC--CEEEEeCCCCCCCCCCCeeEcCcHHHHHHHHHHHH-hhhcccCcccccHHHHHHHHHhccchhH
Confidence 89999999998654 79999999999999999999999999999999999 9999999999999999999999998899
Q ss_pred HHHHHHHHhhcCCceEeEecCCCCCcchHHHHHHHhhhhHHHHHHHHHh
Q 020035 174 PKIIEHLMKKFNQDLVFCRAPADNDLTSGVHERQVQKIDPLLKWVESEF 222 (332)
Q Consensus 174 ~~ii~~Ll~Yl~tDtvcyra~~p~~L~~~L~~~Q~e~WdPll~W~~~~f 222 (332)
+.++++|++|++|||||||+++|+ .|+++|.+.|+||++||+++|
T Consensus 78 ~~~~~~il~yl~tDtlc~r~~~~~----~L~~~Q~~~w~Pll~w~~~~f 122 (122)
T PF07542_consen 78 EAVIDEILRYLDTDTLCYRAPEPE----ELVERQEEKWDPLLEWAEERF 122 (122)
T ss_dssp HHHHHHHHHHHHC-CCCEE--SSH----HHHHHHHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHcCCCeEEEeCCCcH----HHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999984 479999999999999999987
No 4
>PF06236 MelC1: Tyrosinase co-factor MelC1; InterPro: IPR010928 This family consists of several tyrosinase co-factor MELC1 proteins from a number of Streptomyces species. The melanin operon (melC) of Streptomyces antibioticus contains two genes, melC1 and melC2 (apotyrosinase). It is thought that MelC1 forms a transient binary complex with the downstream apotyrosinase MelC2 to facilitate the incorporation of copper ion and the secretion of tyrosinase indicating that MelC1 is a chaperone for the apotyrosinase MelC2 [].; GO: 0005507 copper ion binding, 0042438 melanin biosynthetic process; PDB: 1WX4_B 2ZWD_B 2ZMZ_B 1WX2_B 1WX5_D 3AWX_B 3AWS_B 2ZMY_B 3AX0_B 2ZWG_B ....
Probab=35.23 E-value=18 Score=31.54 Aligned_cols=44 Identities=34% Similarity=0.459 Sum_probs=24.8
Q ss_pred CCCEEEEeCCCcCCCC---CCCcee-------eCc-HHHHHHHHHHhccccCCCccCC
Q 020035 108 GNGWTVMLDYRTLKTP---SKRPLK-------LPT-LGLAKAIGAEWDYQQTDGIRPF 154 (332)
Q Consensus 108 ~~g~~V~LDgR~LKTP---~~~~L~-------vPs-~~LA~aIA~EW~~~Q~e~I~p~ 154 (332)
+++|.|++|||+|.-. .|.-|+ +|+ .++|.+.-.|-. +..+.|.
T Consensus 68 ~~~~~V~IDGr~LhvMr~ADGswlS~V~HYe~~pTpl~aARAAVdeL~---ga~L~p~ 122 (125)
T PF06236_consen 68 GGGYEVTIDGRPLHVMRRADGSWLSVVNHYESYPTPLEAARAAVDELG---GARLVPF 122 (125)
T ss_dssp --SEEEEETTEEE-EEE-TTS-EEETTEEEEEESSHHHHHHHHHHHHT---T--B---
T ss_pred CCceEEEECCeEeeeEEcCCCCEEeeeecccCCCCHHHHHHHHHHHhC---CCcccCC
Confidence 3579999999998653 344443 466 677777777765 4444443
No 5
>PF11469 Ribonucleas_3_2: Ribonuclease III; InterPro: IPR021568 This archaeal family of proteins has no known function. ; PDB: 1ZTD_A.
Probab=25.73 E-value=67 Score=27.44 Aligned_cols=21 Identities=43% Similarity=0.729 Sum_probs=18.1
Q ss_pred HHHHHHHHcCCCCHHHHHHHh
Q 020035 270 LVIAIGIFRGKLQIEEAIELI 290 (332)
Q Consensus 270 lilaLAl~~g~l~~e~A~~aa 290 (332)
.+|+.|.++|.+++|||++.-
T Consensus 64 A~iAyAWLeg~it~eEaveil 84 (120)
T PF11469_consen 64 ALIAYAWLEGKITIEEAVEIL 84 (120)
T ss_dssp HHHHHHHHTTSS-HHHHHHHH
T ss_pred HHHHHHHHhccccHHHHHHHH
Confidence 579999999999999999875
No 6
>PF01950 FBPase_3: Fructose-1,6-bisphosphatase; InterPro: IPR002803 Fructose-1,6-bisphophatase (FBPase) catalyses the hydrolysis of D-fructose-1,6-bisphosphate (FBP) to D-fructose-6-phopshate (F6P) and orthophosphate, and is a key enzyme in gluconeogenesis []. Three different groups of FBPases have been identified in eukaryotes and bacteria (FBPase I-III) []. None of these groups have been found in archaea so far, though a new group of FBPases (FBPase IV) which also show inositol monophosphatase activity has recently been identified in archaea []. Proteins in this entry are though to represent a new group of FBPases (FBPase V) which are found in thermophilic archaea and a hyperthermophilic bacterium Aquifex aeolicus []. The characterised members of this group show strict substrate specificity for FBP and are suggested to be the true FBPase in these organisms [, ]. A structural study suggests that FBPase V has a novel fold for a sugar phosphatase, forming a four-layer alpha-beta-beta-alpha sandwich, unlike the more usual five-layered alpha-beta-alpha-beta-alpha arrangement []. The arrangement of the catalytic side chains and metal ligands was found to be consistent with the three-metal ion assisted catalysis mechanism proposed for other FBPases.; PDB: 3T2C_A 3T2G_A 3T2F_A 3T2E_A 3T2D_A 3T2B_A 3R1M_A 1UMG_A.
Probab=19.57 E-value=52 Score=33.12 Aligned_cols=75 Identities=21% Similarity=0.294 Sum_probs=48.4
Q ss_pred ccccccCCCCCCcCcccceeeeeEeCCCCCEEEEeCCCcCCCCCCCceeeCc----HHHHHHHHHHhccccCCCccCCCC
Q 020035 81 TMPMSFMTGSIVGKRFYEKVSTREADDGNGWTVMLDYRTLKTPSKRPLKLPT----LGLAKAIGAEWDYQQTDGIRPFMM 156 (332)
Q Consensus 81 ~~~~~~~~~~~~~KRFyK~V~V~~~~~~~g~~V~LDgR~LKTP~~~~L~vPs----~~LA~aIA~EW~~~Q~e~I~p~tM 156 (332)
-||+++.++. ..||.=--.|... ||+|. |||-+- | --.+.=|. +..|..+|.+.. .| ..+.||.+
T Consensus 272 LMPV~~~~a~--~trfdgpPrV~al----gFq~~-~GkL~G-P-~DlFddpafD~~R~~a~~~A~~mR-r~-Gpf~PhrL 340 (363)
T PF01950_consen 272 LMPVSFNDAV--PTRFDGPPRVIAL----GFQLS-NGKLIG-P-VDLFDDPAFDYARQKANEIADYMR-RQ-GPFEPHRL 340 (363)
T ss_dssp -EEE-STCEC--T-GGG-S-EEEEE----EEEEE-TTEEEE-E-EETT-SHHHHHHHHHHHHHHHHHH-TT-TT-TTTB-
T ss_pred ccceecccCC--cccCCCCCeEEEE----EEEee-CCEEcC-C-ccccCCccchHHHHHHHHHHHHHH-hc-CCCCCccC
Confidence 5788877653 4689877777654 79998 888654 2 22233333 889999999999 88 58999999
Q ss_pred chhHHHhHhh
Q 020035 157 PLMKLACTAL 166 (332)
Q Consensus 157 PLT~La~tAI 166 (332)
|+..+-.|.+
T Consensus 341 p~~EmEYttl 350 (363)
T PF01950_consen 341 PPEEMEYTTL 350 (363)
T ss_dssp -HHHCTTSSC
T ss_pred CHHHhhhccH
Confidence 9998866654
No 7
>TIGR02500 type_III_yscD type III secretion apparatus protein, YscD/HrpQ family. This family represents a conserved protein of bacterial type III secretion systems. Gene symbols are variable from species to species. Members are designated YscD in Yersinia, HrpQ in Pseudomonas syringae, and EscD in enteropathogenic Escherichia coli. In the Chlamydiae, this model describes the C-terminal 400 residues of a longer protein.
Probab=18.68 E-value=1.3e+02 Score=30.45 Aligned_cols=55 Identities=11% Similarity=0.059 Sum_probs=38.7
Q ss_pred CChHHHHHHHHhhcCCceEeEe-cCCCCCcchHHHHHHHhhhhHHHHHHHHHhCCc
Q 020035 171 LTRPKIIEHLMKKFNQDLVFCR-APADNDLTSGVHERQVQKIDPLLKWVESEFGFK 225 (332)
Q Consensus 171 ~~r~~ii~~Ll~Yl~tDtvcyr-a~~p~~L~~~L~~~Q~e~WdPll~W~~~~fgv~ 225 (332)
..+..+...|.+..=.+.+.++ .++-=++.+.|.+.|.++|.-++++|+++||..
T Consensus 280 ~~~~~L~~~L~~~gL~~~~~~~~~~~~i~lsG~l~~~~~~~~~~~l~~f~~~~~~~ 335 (410)
T TIGR02500 280 DVIAQLASLLSDAGLLGVVTVTESGREIALSGQLDSEKRSRLQELLAAFKQRDGVI 335 (410)
T ss_pred HHHHHHHHHHHHCCCCceEEEEecCCEEEEEecCCHHHHHHHHHHHHHHHHhCCCC
Confidence 3345666667666444444444 332335678899999999999999999999863
No 8
>KOG3831 consensus Uncharacterized conserved protein [Function unknown]
Probab=18.65 E-value=43 Score=30.37 Aligned_cols=22 Identities=27% Similarity=0.517 Sum_probs=20.0
Q ss_pred hHHHHHHHHhhcCCceEeEecC
Q 020035 173 RPKIIEHLMKKFNQDLVFCRAP 194 (332)
Q Consensus 173 r~~ii~~Ll~Yl~tDtvcyra~ 194 (332)
++++++.++.-+++|-||||+-
T Consensus 146 k~qivqfl~dmfd~~kv~y~sl 167 (196)
T KOG3831|consen 146 KEQIVQFLLDMFDLDKVCYRSL 167 (196)
T ss_pred HHHHHHHHHHHhhhhhHHHhhH
Confidence 6789999999999999999975
No 9
>PF09862 DUF2089: Protein of unknown function (DUF2089); InterPro: IPR018658 This family consists of various hypothetical prokaryotic proteins.
Probab=18.50 E-value=2e+02 Score=24.54 Aligned_cols=59 Identities=19% Similarity=0.308 Sum_probs=34.8
Q ss_pred HHHHHHhCCcccccCCccCCCCCHHHHHHHHHHHhCCCchhHHHHHHHHHHhhHHHHHHHHHcCCCCHHHHHHH
Q 020035 216 KWVESEFGFKPVVYSSFFGGKQEDGLIKTVENLMKKTDDYELAAIDAIAAAAHSLVIAIGIFRGKLQIEEAIEL 289 (332)
Q Consensus 216 ~W~~~~fgv~l~~t~gi~~~~Q~~~t~~~l~~~L~sld~w~Laal~~av~~~kSlilaLAl~~g~l~~e~A~~a 289 (332)
.-+++.+|+.. |.++.++.+.+.++.--.- -..-....++=||- .|-.|.|++|+|.+.
T Consensus 53 Ke~e~~lgiSY------------PTvR~rLd~ii~~lg~~~~--~~~~~~~~~~~IL~-~L~~GeIs~eeA~~~ 111 (113)
T PF09862_consen 53 KEMEKELGISY------------PTVRNRLDKIIEKLGYEED--EEEEEEDERKEILD-KLEKGEISVEEALEI 111 (113)
T ss_pred HHHHHHHCCCc------------HHHHHHHHHHHHHhCCCCC--cccccchhHHHHHH-HHHcCCCCHHHHHHH
Confidence 34566667665 6777888888876654000 01112222333332 456999999999875
No 10
>PTZ00242 protein tyrosine phosphatase; Provisional
Probab=17.36 E-value=85 Score=27.86 Aligned_cols=25 Identities=20% Similarity=0.183 Sum_probs=17.8
Q ss_pred HhhHHHHHHHHHcCCCCHHHHHHHh
Q 020035 266 AAHSLVIAIGIFRGKLQIEEAIELI 290 (332)
Q Consensus 266 ~~kSlilaLAl~~g~l~~e~A~~aa 290 (332)
-++.++++.-+..|.+++++|+..-
T Consensus 111 RSgt~~a~yL~~~~~~s~~eAi~~v 135 (166)
T PTZ00242 111 RAPILVALALVEYGGMEPLDAVGFV 135 (166)
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 3455666665666779999999755
Done!