Query 020039
Match_columns 332
No_of_seqs 185 out of 528
Neff 6.0
Searched_HMMs 29240
Date Mon Mar 25 10:51:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020039.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020039hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2f5j_A Mortality factor 4-like 100.0 2.4E-52 8.3E-57 372.7 13.1 168 163-330 3-175 (181)
2 2y0n_A MALE-specific lethal 3 100.0 8.3E-50 2.8E-54 364.3 14.1 164 163-326 5-207 (211)
3 3oa6_A MALE-specific lethal 3 100.0 7.2E-30 2.5E-34 209.1 8.0 78 45-122 13-100 (110)
4 2f5k_A MORF-related gene 15 is 100.0 1E-28 3.5E-33 200.4 9.1 77 47-123 18-94 (102)
5 3m9q_A Protein MALE-specific l 99.9 3.4E-28 1.2E-32 196.8 8.9 71 51-121 19-99 (101)
6 3m9p_A MALE-specific lethal 3 99.9 8.7E-28 3E-32 196.6 8.0 73 50-122 18-100 (110)
7 2lrq_A Protein MRG15, NUA4 com 99.9 2.1E-28 7.1E-33 193.0 0.0 73 49-121 10-82 (85)
8 3e9g_A Chromatin modification- 99.9 1.1E-26 3.8E-31 193.7 8.2 75 51-125 7-119 (130)
9 2k3y_A Chromatin modification- 99.9 3.8E-26 1.3E-30 193.8 7.7 72 51-122 9-118 (136)
10 2lcc_A AT-rich interactive dom 99.9 1.7E-22 6E-27 156.0 7.5 63 51-113 5-71 (76)
11 2ro0_A Histone acetyltransfera 99.8 7.2E-21 2.4E-25 151.9 9.6 54 51-104 23-76 (92)
12 2rnz_A Histone acetyltransfera 99.8 2.1E-20 7.2E-25 149.3 6.3 54 51-104 25-78 (94)
13 2eko_A Histone acetyltransfera 99.8 3.9E-20 1.3E-24 146.1 6.1 54 51-104 9-67 (87)
14 2bud_A Males-absent on the fir 99.8 7.6E-20 2.6E-24 145.1 6.0 55 55-109 18-76 (92)
15 1wgs_A MYST histone acetyltran 99.8 3.1E-19 1.1E-23 151.6 8.7 55 51-105 12-69 (133)
16 2eqm_A PHD finger protein 20-l 99.4 2.6E-13 8.8E-18 107.4 7.5 64 43-108 11-77 (88)
17 3sd4_A PHD finger protein 20; 99.2 1.2E-11 4.1E-16 93.4 7.1 57 43-101 4-61 (69)
18 3h8z_A FragIle X mental retard 98.6 7.7E-08 2.6E-12 80.8 7.0 60 44-107 53-118 (128)
19 4a4f_A SurviVal of motor neuro 97.9 2.5E-05 8.5E-10 57.6 6.6 58 46-107 3-62 (64)
20 2equ_A PHD finger protein 20-l 97.6 0.00013 4.3E-09 55.6 6.0 54 49-108 7-61 (74)
21 1mhn_A SurviVal motor neuron p 97.5 0.00014 4.7E-09 52.7 5.8 53 51-107 3-57 (59)
22 1wjq_A KIAA1798 protein; MBT d 97.5 0.00014 5E-09 59.1 6.2 51 51-105 13-68 (107)
23 2xk0_A Polycomb protein PCL; t 97.4 0.00024 8.3E-09 52.9 5.5 52 48-106 12-64 (69)
24 3s6w_A Tudor domain-containing 97.3 0.00047 1.6E-08 48.8 6.1 50 51-104 1-52 (54)
25 1g5v_A SurviVal motor neuron p 97.3 0.00058 2E-08 53.6 6.9 54 50-107 9-64 (88)
26 2l8d_A Lamin-B receptor; DNA b 97.2 0.00055 1.9E-08 50.5 5.8 53 48-105 6-60 (66)
27 2m0o_A PHD finger protein 1; t 97.2 0.00031 1.1E-08 53.4 4.5 53 41-95 16-69 (79)
28 3p8d_A Medulloblastoma antigen 97.2 0.00043 1.5E-08 51.7 5.1 50 51-106 6-56 (67)
29 2dig_A Lamin-B receptor; tudor 97.2 0.00069 2.4E-08 50.1 5.6 51 48-103 9-61 (68)
30 2biv_A SCML2 protein, sex COMB 97.1 0.00083 2.8E-08 62.0 7.2 56 46-105 166-226 (243)
31 3qii_A PHD finger protein 20; 96.8 0.0012 4.2E-08 51.3 4.9 50 51-106 21-71 (85)
32 4hcz_A PHD finger protein 1; p 96.8 0.0013 4.5E-08 47.4 4.6 45 51-97 3-48 (58)
33 2r58_A Polycomb protein SCM; M 96.8 0.0027 9.1E-08 59.3 7.5 55 47-105 139-198 (265)
34 2eqj_A Metal-response element- 96.6 0.0034 1.2E-07 46.5 5.3 41 51-93 13-54 (66)
35 3pnw_C Tudor domain-containing 96.5 0.005 1.7E-07 46.9 6.2 54 51-108 17-72 (77)
36 2d9t_A Tudor domain-containing 96.5 0.0042 1.4E-07 47.3 5.7 54 50-107 8-63 (78)
37 2e5p_A Protein PHF1, PHD finge 96.3 0.0042 1.4E-07 46.0 4.4 52 48-104 6-58 (68)
38 2ldm_A Uncharacterized protein 95.1 0.00087 3E-08 51.8 0.0 50 51-106 6-56 (81)
39 2e5q_A PHD finger protein 19; 96.1 0.0031 1E-07 46.0 2.8 49 51-104 7-56 (63)
40 2biv_A SCML2 protein, sex COMB 95.9 0.016 5.6E-07 53.3 7.4 54 48-105 59-117 (243)
41 2r58_A Polycomb protein SCM; M 95.8 0.022 7.4E-07 53.1 7.6 49 49-101 32-83 (265)
42 3fdr_A Tudor and KH domain-con 95.6 0.035 1.2E-06 43.1 7.3 53 51-108 27-81 (94)
43 1oz2_A Lethal(3)malignant brai 95.5 0.024 8.1E-07 54.4 7.2 51 50-104 147-202 (331)
44 1oz2_A Lethal(3)malignant brai 95.4 0.025 8.6E-07 54.3 6.9 52 50-105 251-307 (331)
45 3h6z_A Polycomb protein SFMBT; 95.3 0.026 8.9E-07 56.3 6.9 54 48-105 373-431 (447)
46 3fdt_A Chromobox protein homol 95.2 0.032 1.1E-06 40.1 5.4 37 67-103 4-41 (59)
47 3i91_A Chromobox protein homol 95.1 0.029 1E-06 39.5 4.8 38 67-104 4-42 (54)
48 1pfb_A Polycomb protein; chrom 95.1 0.03 1E-06 39.6 4.8 35 70-104 8-42 (55)
49 3h91_A Chromobox protein homol 95.0 0.033 1.1E-06 39.2 4.9 38 67-104 4-42 (54)
50 3lwe_A M-phase phosphoprotein 95.0 0.022 7.5E-07 41.4 4.0 39 66-104 4-43 (62)
51 2l89_A PWWP domain-containing 94.9 0.077 2.6E-06 42.7 7.4 59 51-111 5-72 (108)
52 1ri0_A Hepatoma-derived growth 94.9 0.03 1E-06 45.3 4.8 59 48-108 16-78 (110)
53 1pdq_A Polycomb protein; methy 94.8 0.053 1.8E-06 40.8 5.8 41 64-104 18-59 (72)
54 2k1b_A Chromobox protein homol 94.8 0.034 1.1E-06 42.0 4.7 41 64-104 19-60 (73)
55 3f70_A Lethal(3)malignant brai 94.7 0.058 2E-06 53.9 7.3 51 51-105 366-421 (456)
56 3f2u_A Chromobox protein homol 94.7 0.046 1.6E-06 38.7 4.8 34 70-103 7-40 (55)
57 3ut1_A Lethal(3)malignant brai 94.6 0.057 2E-06 51.6 7.0 52 50-105 246-302 (324)
58 1wjr_A KIAA1617 protein; MBT d 94.5 0.031 1.1E-06 46.5 4.1 51 51-105 11-68 (127)
59 3mts_A Histone-lysine N-methyl 94.5 0.045 1.5E-06 40.1 4.5 35 70-104 5-39 (64)
60 2d9u_A Chromobox protein homol 94.4 0.059 2E-06 40.5 5.2 40 66-105 10-50 (74)
61 3g7l_A Chromo domain-containin 94.4 0.059 2E-06 39.0 5.0 40 65-104 6-47 (61)
62 2kvm_A Chromobox protein homol 94.4 0.052 1.8E-06 40.8 4.8 39 66-104 13-52 (74)
63 2dnv_A Chromobox protein homol 94.2 0.037 1.3E-06 40.4 3.6 36 70-105 15-50 (64)
64 4hae_A CDY-like 2, chromodomai 94.1 0.084 2.9E-06 40.5 5.5 41 64-104 21-63 (81)
65 1q3l_A Heterochromatin protein 94.1 0.064 2.2E-06 40.0 4.7 40 64-103 14-54 (69)
66 1ap0_A Modifier protein 1; chr 93.8 0.08 2.7E-06 39.7 4.9 38 66-103 13-51 (73)
67 2diq_A Tudor and KH domain-con 93.7 0.061 2.1E-06 43.0 4.3 53 51-108 32-86 (110)
68 3feo_A MBT domain-containing p 93.5 0.13 4.5E-06 51.0 7.3 52 50-105 361-417 (437)
69 2rso_A Chromatin-associated pr 93.4 0.37 1.3E-05 37.7 8.2 35 70-104 35-72 (92)
70 1h3z_A Hypothetical 62.8 kDa p 93.2 0.12 4.2E-06 41.3 5.4 59 51-111 6-75 (109)
71 2rsn_A Chromo domain-containin 93.2 0.12 4.1E-06 39.0 5.0 40 65-104 20-61 (75)
72 3pfs_A Bromodomain and PHD fin 93.1 0.094 3.2E-06 45.2 4.8 63 47-110 32-123 (158)
73 3ut1_A Lethal(3)malignant brai 92.7 0.22 7.4E-06 47.6 7.0 51 51-105 143-198 (324)
74 2daq_A WHSC1L1 protein, isofor 92.5 0.092 3.2E-06 42.1 3.6 60 47-108 4-72 (110)
75 2gfu_A DNA mismatch repair pro 91.9 0.24 8.3E-06 41.1 5.6 62 49-111 20-89 (134)
76 4fu6_A PC4 and SFRS1-interacti 91.9 0.075 2.6E-06 45.2 2.5 56 51-108 22-81 (153)
77 2hqx_A P100 CO-activator tudor 91.6 0.57 2E-05 42.1 8.3 53 51-108 65-118 (246)
78 2dnt_A Chromodomain protein, Y 90.0 0.2 6.7E-06 37.9 3.0 35 70-104 18-53 (78)
79 3ntk_A Maternal protein tudor; 89.8 0.49 1.7E-05 40.5 5.7 50 51-107 47-98 (169)
80 3qby_A Hepatoma-derived growth 89.6 0.18 6.1E-06 39.5 2.6 55 51-107 5-63 (94)
81 2qqr_A JMJC domain-containing 89.4 1.2 4E-05 36.6 7.4 53 51-108 5-58 (118)
82 1g6z_A CLR4 protein; transfera 89.2 0.11 3.9E-06 38.4 1.1 35 70-104 13-49 (70)
83 2wac_A CG7008-PA; unknown func 89.0 1.1 3.6E-05 39.2 7.5 52 51-108 51-104 (218)
84 4b9w_A TDRD1, tudor domain-con 88.0 1 3.6E-05 39.3 6.7 53 51-108 65-119 (201)
85 3llr_A DNA (cytosine-5)-methyl 87.6 0.41 1.4E-05 41.0 3.7 56 51-108 16-76 (154)
86 3db3_A E3 ubiquitin-protein li 87.6 1.4 4.6E-05 37.9 6.9 40 51-90 10-67 (161)
87 4b9x_A TDRD1, tudor domain-con 87.0 1.3 4.5E-05 39.4 6.9 53 51-108 65-119 (226)
88 1khc_A DNA cytosine-5 methyltr 86.7 0.84 2.9E-05 38.7 5.1 58 49-108 9-71 (147)
89 3ask_A E3 ubiquitin-protein li 86.5 1.3 4.3E-05 40.3 6.5 40 51-90 2-50 (226)
90 3mea_A SAGA-associated factor 85.7 0.85 2.9E-05 40.0 4.8 41 49-90 114-156 (180)
91 3bdl_A Staphylococcal nuclease 85.5 1.8 6.2E-05 43.9 7.8 53 51-108 411-464 (570)
92 3mp6_A MBP, SGF29, maltose-bin 85.1 1.1 3.6E-05 44.5 5.8 46 42-90 448-495 (522)
93 3f70_A Lethal(3)malignant brai 84.3 1.4 4.7E-05 43.9 6.2 48 50-101 152-202 (456)
94 2xdp_A Lysine-specific demethy 83.2 1.2 4E-05 36.8 4.3 52 51-107 6-58 (123)
95 3l42_A Peregrin; transcription 82.5 0.67 2.3E-05 38.6 2.6 59 51-110 5-92 (130)
96 3dlm_A Histone-lysine N-methyl 78.3 4.5 0.00015 36.3 6.7 51 45-101 152-202 (213)
97 3nrw_A Phage integrase/site-sp 77.3 22 0.00075 27.2 11.2 89 195-307 4-93 (117)
98 2eqk_A Tudor domain-containing 75.0 6.4 0.00022 30.3 5.8 55 49-108 19-75 (85)
99 3dlm_A Histone-lysine N-methyl 73.8 5.8 0.0002 35.6 6.1 51 51-104 8-59 (213)
100 3h8z_A FragIle X mental retard 73.3 7 0.00024 32.3 6.1 46 54-105 4-51 (128)
101 1ssf_A Transformation related 72.0 2.6 9E-05 36.0 3.3 37 53-92 10-49 (156)
102 3db3_A E3 ubiquitin-protein li 66.8 12 0.00041 32.1 6.3 40 51-90 92-139 (161)
103 1x3p_A Cpsrp43; chromo-2 domai 66.8 0.53 1.8E-05 33.1 -1.8 32 70-103 5-38 (54)
104 2fhd_A RAD9 homolog, DNA repai 64.0 11 0.00036 32.1 5.3 38 55-92 9-51 (153)
105 2b2y_A CHD-1, chromodomain-hel 63.5 2.1 7.1E-05 37.6 1.0 31 75-105 52-82 (187)
106 3mwy_W Chromo domain-containin 62.5 2.8 9.5E-05 44.1 1.9 27 78-104 69-95 (800)
107 2b2y_C CHD-1, chromodomain-hel 57.9 1.5 5.2E-05 35.7 -0.9 33 72-104 49-81 (115)
108 2a7y_A Hypothetical protein RV 55.3 8.6 0.0003 29.4 3.0 47 51-99 5-54 (83)
109 2ee4_A RHO GTPase activating p 55.2 58 0.002 28.0 8.9 140 169-314 26-204 (209)
110 2epb_A Chromodomain-helicase-D 53.1 19 0.00065 26.1 4.5 24 80-103 32-55 (68)
111 2h1e_A Chromo domain protein 1 52.1 4.1 0.00014 35.3 0.9 26 80-105 46-71 (177)
112 2kkp_A Phage integrase; SAM-li 51.6 69 0.0024 23.5 8.2 89 195-307 4-92 (117)
113 3ask_A E3 ubiquitin-protein li 50.6 29 0.001 31.3 6.3 28 51-78 75-109 (226)
114 2kd1_A DNA integration/recombi 50.4 66 0.0023 23.8 7.7 88 195-307 3-90 (118)
115 1pbw_A Rhogap domain, phosphat 44.5 1.5E+02 0.0052 25.5 10.7 143 169-314 24-200 (216)
116 3h6z_A Polycomb protein SFMBT; 41.0 44 0.0015 33.0 6.4 48 51-104 156-208 (447)
117 1tx4_A P50-rhogap; complex (GT 40.9 1.6E+02 0.0056 24.8 11.1 139 169-312 25-198 (198)
118 3feo_A MBT domain-containing p 38.6 97 0.0033 30.4 8.4 45 51-98 254-303 (437)
119 3fk2_A Glucocorticoid receptor 38.4 2.1E+02 0.0071 25.2 12.9 141 169-314 67-245 (246)
120 1nz9_A Transcription antitermi 36.0 43 0.0015 23.0 4.0 37 51-87 4-41 (58)
121 2g3r_A Tumor suppressor P53-bi 35.6 61 0.0021 26.4 5.3 36 54-92 7-45 (123)
122 1ow3_A RHO-GTPase-activating p 33.3 2.5E+02 0.0085 24.6 11.1 141 168-313 60-235 (242)
123 2fmm_A Chromobox protein homol 33.3 61 0.0021 23.8 4.7 33 69-103 19-51 (74)
124 3msx_B RHO GTPase-activating p 29.7 2.5E+02 0.0086 23.6 11.8 139 170-312 26-201 (201)
125 3iug_A RHO/CDC42/RAC GTPase-ac 29.3 2.8E+02 0.0095 24.0 10.2 145 169-318 36-225 (229)
126 2kkv_A Integrase; protein stru 28.6 1.8E+02 0.0061 21.5 9.1 86 195-307 4-89 (121)
127 1y71_A Kinase-associated prote 28.1 88 0.003 25.8 5.1 32 51-86 7-38 (130)
128 3eap_A RHO GTPase-activating p 25.8 3.6E+02 0.012 24.1 10.3 17 297-313 242-258 (271)
129 2xdp_A Lysine-specific demethy 25.0 1.3E+02 0.0045 24.4 5.7 33 53-88 66-99 (123)
130 1p94_A Plasmid partition prote 25.0 1.2E+02 0.004 22.5 4.9 39 162-211 33-71 (76)
131 3byi_A RHO GTPase activating p 24.5 3.3E+02 0.011 23.2 10.7 145 169-315 34-214 (214)
132 2qqr_A JMJC domain-containing 24.0 1.6E+02 0.0056 23.7 6.0 33 54-89 66-99 (118)
133 2h1e_A Chromo domain protein 1 23.7 61 0.0021 27.8 3.6 35 70-104 125-164 (177)
134 1use_A VAsp, vasodilator-stimu 22.2 1.2E+02 0.004 20.5 3.9 28 202-236 15-42 (45)
135 3mlq_E Transcription-repair co 21.7 1E+02 0.0035 22.4 4.0 49 51-103 2-52 (71)
136 2b2y_A CHD-1, chromodomain-hel 21.7 60 0.0021 28.1 3.2 34 70-103 135-171 (187)
137 2jvv_A Transcription antitermi 21.5 1.2E+02 0.0041 25.5 5.1 41 49-89 125-166 (181)
138 3nnf_A CURA; non-HAEM Fe(II)/a 20.4 47 0.0016 31.5 2.3 46 51-97 237-282 (344)
139 2loj_A Putative cytoplasmic pr 20.4 2.5E+02 0.0084 20.2 6.1 25 48-72 30-54 (63)
140 4hg1_A Putative cytoplasmic pr 20.2 40 0.0014 29.4 1.7 27 166-192 47-73 (225)
No 1
>2f5j_A Mortality factor 4-like protein 1; MRG fold, mainly A-helix, gene regulation; 2.20A {Homo sapiens} PDB: 2aql_A 2lkm_B
Probab=100.00 E-value=2.4e-52 Score=372.72 Aligned_cols=168 Identities=40% Similarity=0.610 Sum_probs=148.9
Q ss_pred CceeEEeCChhHHHHHHHHhHhhhhCCceecCCCCCCHHHHHHHHHHhhhccCC--chhhhHHHHHHHHHHHHhhhcCcc
Q 020039 163 ENFVNIQIPPPLKKQLVDDCEFITHLGKLVKLPRTPNVDDILEKYCDYRSKKDG--LVADSTGEIVKGLRCYFDKALPIM 240 (332)
Q Consensus 163 ~~~i~I~iP~~Lk~iLvdD~e~Itk~~kL~~LPa~~tV~~IL~~Y~~~~~~~~~--~~~~~~~E~~~Gl~~YFn~~L~~~ 240 (332)
+++++|.||+.||.+|||||++|+++++|++|||++||++||++|+++...... ....++.|+++||+.|||++||.+
T Consensus 3 ~~~i~i~iP~~Lk~~LvdDw~~Itk~~~L~~LP~~~~V~~IL~~Y~~~~~~~~~~~~~~~~~~Ev~~Gl~~YFd~~L~~~ 82 (181)
T 2f5j_A 3 RVEVKVKIPEELKPWLVDDWDLITRQKQLFYLPAKKNVDSILEDYANYKKSRGNTDNKEYAVNEVVAGIKEYFNVMLGTQ 82 (181)
T ss_dssp ---CCCCCCGGGHHHHHHHHHHHHTSCEEECSSCSSBHHHHHHHHHHHHHC--------CHHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEeCCHHHHHHHHHHHHHHHhCCCeeeCCCCCcHHHHHHHHHHhhcccCCchhHHHHHHHHHHHHHHHHHHHcccc
Confidence 456899999999999999999999999999999999999999999999876542 223578999999999999999999
Q ss_pred cCChhhHhhHHHhhhc--CCCCCcccchHHHHHHHhhhhHhhhcCCCCHHHHHHHHHHHHHHHHHHHHchhcccc-ccCC
Q 020039 241 LLYKSEREQYEDSMAA--DVSPSSVYGAEHLLRLFVKLPELLVHAKIEEETLTLLQHKLVDLLKFLQKHQSTFFL-SRYH 317 (332)
Q Consensus 241 LLY~~ER~QY~~ll~~--~~~pS~iYG~~HLLRLfvkLP~lL~~t~~d~~s~~~l~~~l~~fL~fL~~n~~~~F~-~dY~ 317 (332)
|||++||+||.++++. +.+||++||++|||||||+||+||+.++||+++++.|+.++++||+||++|.++||. ++|+
T Consensus 83 LLY~~ER~Qy~~ll~~~p~~~~S~iYGa~HLLRLfvkLPell~~t~~d~~s~~~L~~~l~~fl~fL~~n~~~~F~~~~Y~ 162 (181)
T 2f5j_A 83 LLYKFERPQYAEILADHPDAPMSQVYGAPHLLRLFVRIGAMLAYTPLDEKSLALLLNYLHDFLKYLAKNSATLFSASDYE 162 (181)
T ss_dssp SCCGGGHHHHHHHHHHSTTCCHHHHCBHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTHHHHCCGGGEE
T ss_pred cCcHHHHHHHHHHHHhCCCCCHHHHcCHHHHHHHHHHhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCHHhcC
Confidence 9999999999999863 568999999999999999999999999999999999999999999999999999995 9999
Q ss_pred CCCHHHHHhhccc
Q 020039 318 SAEDVETSANKQE 330 (332)
Q Consensus 318 ~as~eY~~~a~~~ 330 (332)
+++|+|+++|...
T Consensus 163 ~~~~eY~~~~~~~ 175 (181)
T 2f5j_A 163 VAPPEYHRKAVLE 175 (181)
T ss_dssp ECCHHHHC-----
T ss_pred CCCHHHHHHHhhh
Confidence 9999999999764
No 2
>2y0n_A MALE-specific lethal 3 homolog; transcription, chromatin, X chromosome, MSL complex; 3.00A {Homo sapiens}
Probab=100.00 E-value=8.3e-50 Score=364.29 Aligned_cols=164 Identities=41% Similarity=0.632 Sum_probs=142.8
Q ss_pred CceeEEeCChhHHHHHHHHhHhhhhCCceecCCCCCCHHHHHHHHHHhhhccC--------------------------C
Q 020039 163 ENFVNIQIPPPLKKQLVDDCEFITHLGKLVKLPRTPNVDDILEKYCDYRSKKD--------------------------G 216 (332)
Q Consensus 163 ~~~i~I~iP~~Lk~iLvdD~e~Itk~~kL~~LPa~~tV~~IL~~Y~~~~~~~~--------------------------~ 216 (332)
+++++|.||+.||.+|||||++||++++|++|||++||++||++|+++..... .
T Consensus 5 ~~~v~i~iP~~Lk~~LvdDw~~Itk~~kLv~LPa~~~V~~IL~~Y~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~ 84 (211)
T 2y0n_A 5 ERTITIEIPEVLKKQLEDDCYYINRRKRLVKLPCQTNIITILESYVKHFAINAAFSANERPRHHHVMPHANMNVHYIPAE 84 (211)
T ss_dssp --CCCCCCCHHHHHHHHHHHHHHHTSCCEECSSCSSCHHHHHHHHHHHHHHHHHSCC---------------------CT
T ss_pred CceeEEeCCHHHHHHHHHHHHHHhcCCceEeCCCCCcHHHHHHHHHHHhhhccccccccccccccccccccccccccchh
Confidence 35689999999999999999999999999999999999999999998865210 0
Q ss_pred chhhhHHHHHHHHHHHHhhhcCcccCChhhHhhHHHhhhc------------CCCCCcccchHHHHHHHhhhhHhhhcCC
Q 020039 217 LVADSTGEIVKGLRCYFDKALPIMLLYKSEREQYEDSMAA------------DVSPSSVYGAEHLLRLFVKLPELLVHAK 284 (332)
Q Consensus 217 ~~~~~~~E~~~Gl~~YFn~~L~~~LLY~~ER~QY~~ll~~------------~~~pS~iYG~~HLLRLfvkLP~lL~~t~ 284 (332)
...+.++|+++||+.|||++||.+|||++||+||.++++. +.+||++||++|||||||+||+||+.++
T Consensus 85 ~~~~~~~Ev~~GLr~YFd~~L~~~LLY~~ER~Qy~~~~~~~~~~~~~~~~~~~~~~S~iYGa~HLLRLfvkLPelL~~t~ 164 (211)
T 2y0n_A 85 KNVDLCKEMVDGLRITFDYTLPLVLLYPYEQAQYKKVTSSKYDIPPTTEFDQPPPPSYIYGAQHLLRLFVKLPEILGKMS 164 (211)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHSCCGGGHHHHHHHHHC--------CCSCCCCGGGTCCHHHHHHHHHHHHHHHHHSC
T ss_pred hHHHHHHHHHHHHHHHHHHHcccccCcHHHHHHHHHHHHhhcccCCcccccCCCCHHHHcCHHHHHHHHHHhHHHHhcCC
Confidence 1234689999999999999999999999999999999842 3589999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHchhcccc-ccCCCCCHHHHHh
Q 020039 285 IEEETLTLLQHKLVDLLKFLQKHQSTFFL-SRYHSAEDVETSA 326 (332)
Q Consensus 285 ~d~~s~~~l~~~l~~fL~fL~~n~~~~F~-~dY~~as~eY~~~ 326 (332)
|++++++.|+.++++||+||++|.++||. ++|++++|+|.+.
T Consensus 165 ~d~~s~~~L~~~l~~fl~fL~~n~~~~F~~~~Y~~~~~~~~~~ 207 (211)
T 2y0n_A 165 FSEKNLKALLKHFDLFLRFLAEYHDDFFPESAYVAACEAHYST 207 (211)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTHHHHCCGGGEECC-------
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhCChhccCCCCHHHHhh
Confidence 99999999999999999999999999996 8999998888765
No 3
>3oa6_A MALE-specific lethal 3 homolog; chromodomain, MSL3, histone H4 tail, DNA backbone recognitio methyllysine recognition, H4K20ME1; HET: DNA MLZ; 2.35A {Homo sapiens} PDB: 3ob9_A*
Probab=99.96 E-value=7.2e-30 Score=209.06 Aligned_cols=78 Identities=29% Similarity=0.594 Sum_probs=66.7
Q ss_pred CCCCCCCcCCCCEEEEEe-----CCeeeeeEEEEEEeeCC-----eeEEEEEEcCCCCCccceeccccccccChHhhhhc
Q 020039 45 PTPASCPYQVNEKVLAFF-----QSHVYEAKVIQVQYRLK-----EWTFRVHYLGWNKSWDEWVGVHRLMKDTEANRHRQ 114 (332)
Q Consensus 45 ~~~~~~~f~vge~vl~~~-----~~~~YeAkIl~~~~~~~-----~~~Y~VHY~GWn~r~DEWV~~~ri~k~t~en~~~q 114 (332)
..++...|++||+||||| |+++|+|||++|....+ .+.|+|||+|||++|||||+++||+++|++|+++|
T Consensus 13 ~~~~k~~F~~gEkVLc~h~d~~kg~llYeAKIl~v~~~~~~~~~~~~~Y~VHY~GWn~~WDEWV~~drllk~neeN~~~q 92 (110)
T 3oa6_A 13 SEGMKFKFHSGEKVLCFEPDPTKARVLYDAKIVDVIVGKDEKGRKIPEYLIHFNGWNRSWDRWAAEDHVLRDTDENRRLQ 92 (110)
T ss_dssp -----CCSCTTCEEEEECSCTTSCCCEEEEEEEEEEEEECTTCCEEEEEEEEETTSCGGGCEEEEGGGEEECCHHHHHHH
T ss_pred CCCCCcccCCCCEEEEEecCCCCCcccEEEEEEEEEeccCCcCCcccEEEEEECCcCcchhhccChhhhhcCCHHHHHHH
Confidence 345566799999999999 77999999999987532 47899999999999999999999999999999999
Q ss_pred hhhhhhhh
Q 020039 115 PVFTKKRD 122 (332)
Q Consensus 115 k~L~~~~~ 122 (332)
++|.+++.
T Consensus 93 k~L~~~~~ 100 (110)
T 3oa6_A 93 RKLARKAV 100 (110)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99987664
No 4
>2f5k_A MORF-related gene 15 isoform 1; beta barrel, gene regulation; 2.20A {Homo sapiens} SCOP: b.34.13.3 PDB: 2efi_A
Probab=99.95 E-value=1e-28 Score=200.38 Aligned_cols=77 Identities=36% Similarity=0.683 Sum_probs=71.7
Q ss_pred CCCCCcCCCCEEEEEeCCeeeeeEEEEEEeeCCeeEEEEEEcCCCCCccceeccccccccChHhhhhchhhhhhhhh
Q 020039 47 PASCPYQVNEKVLAFFQSHVYEAKVIQVQYRLKEWTFRVHYLGWNKSWDEWVGVHRLMKDTEANRHRQPVFTKKRDE 123 (332)
Q Consensus 47 ~~~~~f~vge~vl~~~~~~~YeAkIl~~~~~~~~~~Y~VHY~GWn~r~DEWV~~~ri~k~t~en~~~qk~L~~~~~~ 123 (332)
++...|.+||+|+|++++.+|+|+|++++..++..+|||||.|||+||||||+++||+++|++|+++|++|.++++.
T Consensus 18 ~~~~~f~vGekVl~~~~~~~YeAkIl~v~~~~~~~~Y~VHY~GwNkR~DEWV~~~Rl~k~t~en~~~q~~L~~~~~~ 94 (102)
T 2f5k_A 18 DPKPKFQEGERVLCFHGPLLYEAKCVKVAIKDKQVKYFIHYSGWNKNWDEWVPESRVLKYVDTNLQKQRELQKANQE 94 (102)
T ss_dssp CCSCSCCTTCEEEEESSSSEEEEEEEEEEEETTEEEEEEEETTSCGGGCEEEEGGGEEESSHHHHHHHHHHHHHHHH
T ss_pred CCCcccCCCCEEEEEECCEEEEEEEEEEEEcCCCcEEEEEeCCcCCCceeeccHhhcccCCHHHHHHHHHHHHHHHh
Confidence 34446999999999999999999999999999999999999999999999999999999999999999999887743
No 5
>3m9q_A Protein MALE-specific lethal-3; chromodomain, MSL3, methyllysine recognition, aromatic CAGE, complex, transcription upregulation; 1.29A {Drosophila melanogaster} SCOP: b.34.13.0
Probab=99.95 E-value=3.4e-28 Score=196.79 Aligned_cols=71 Identities=32% Similarity=0.569 Sum_probs=66.3
Q ss_pred CcCCCCEEEEEe-----CCeeeeeEEEEEEee-----CCeeEEEEEEcCCCCCccceeccccccccChHhhhhchhhhhh
Q 020039 51 PYQVNEKVLAFF-----QSHVYEAKVIQVQYR-----LKEWTFRVHYLGWNKSWDEWVGVHRLMKDTEANRHRQPVFTKK 120 (332)
Q Consensus 51 ~f~vge~vl~~~-----~~~~YeAkIl~~~~~-----~~~~~Y~VHY~GWn~r~DEWV~~~ri~k~t~en~~~qk~L~~~ 120 (332)
.|++||+||||| ++++|+|||++|... .+.+.|+|||.|||+||||||+++||+|+|++|+++|++|.++
T Consensus 19 ~f~~GEkVLc~h~d~~kg~~lYeAKIl~v~~~~~~~~~~~~~Y~VHY~GWn~rwDEWV~edRilk~~eeN~~~q~~L~~~ 98 (101)
T 3m9q_A 19 LFHKGEIVLCYEPDKSKARVLYTSKVLNVFERRNEHGLRFYEYKIHFQGWRPSYDRAVRATVLLKDTEENRQLQRELAEA 98 (101)
T ss_dssp CCCTTCEEEEECCCTTSCCCEEEEEEEEEEEEECTTSCEEEEEEEEETTSCGGGCEEECGGGEEECCHHHHHHHHHHHHH
T ss_pred cccCCCEEEEEecCCCCCCcceEeEEEEEEecCCccccCceEEEEEeCCCCcCceeecCHHHcccCCHHHHHHHHHHHHH
Confidence 599999999999 589999999999985 4578999999999999999999999999999999999999876
Q ss_pred h
Q 020039 121 R 121 (332)
Q Consensus 121 ~ 121 (332)
+
T Consensus 99 ~ 99 (101)
T 3m9q_A 99 A 99 (101)
T ss_dssp H
T ss_pred c
Confidence 5
No 6
>3m9p_A MALE-specific lethal 3 homolog; chromodomain, MSL3, histone H4 tail, DNA backbone recognitio methyllysine recognition, H4K20ME1; HET: DNA MLZ; 2.35A {Homo sapiens} PDB: 3oa6_A* 3ob9_A*
Probab=99.94 E-value=8.7e-28 Score=196.56 Aligned_cols=73 Identities=32% Similarity=0.646 Sum_probs=67.2
Q ss_pred CCcCCCCEEEEEeCC-----eeeeeEEEEEEeeCC-----eeEEEEEEcCCCCCccceeccccccccChHhhhhchhhhh
Q 020039 50 CPYQVNEKVLAFFQS-----HVYEAKVIQVQYRLK-----EWTFRVHYLGWNKSWDEWVGVHRLMKDTEANRHRQPVFTK 119 (332)
Q Consensus 50 ~~f~vge~vl~~~~~-----~~YeAkIl~~~~~~~-----~~~Y~VHY~GWn~r~DEWV~~~ri~k~t~en~~~qk~L~~ 119 (332)
..|.+||+|||||++ ++|+|||++|+..++ .+.|||||.|||++|||||+++||+++|++|+++|++|.+
T Consensus 18 ~~F~~GEkVLc~hgd~~k~~~lYeAKIl~v~~~~~~~g~~~~~Y~VHY~GWn~~wDEWV~e~rllk~~eeN~~~q~~L~~ 97 (110)
T 3m9p_A 18 FKFHSGEKVLCFEPDPTKARVLYDAKIVDVIVGKDEKGRKIPEYLIHFNGWNRSWDRWAAEDHVLRDTDENRRLQRKLAR 97 (110)
T ss_dssp CCSCTTCEEEEECSCTTSCCCEEEEEEEEEEEEECTTCCEEEEEEEEETTSCGGGCEEEEGGGEEECCHHHHHHHHHHHH
T ss_pred CcccCCCEEEEEcCCCCCCCCceeeEEEEEEeccCcccccceEEEEEECCCCcchhhccCHhhhhcCCHHHHHHHHHHHH
Confidence 359999999999995 999999999998642 4899999999999999999999999999999999999988
Q ss_pred hhh
Q 020039 120 KRD 122 (332)
Q Consensus 120 ~~~ 122 (332)
.+.
T Consensus 98 ~a~ 100 (110)
T 3m9p_A 98 KAV 100 (110)
T ss_dssp HHH
T ss_pred HHH
Confidence 774
No 7
>2lrq_A Protein MRG15, NUA4 complex subunit EAF3 homolog; epigenetics, LID complex, transcription; NMR {Drosophila melanogaster}
Probab=99.89 E-value=2.1e-28 Score=192.96 Aligned_cols=73 Identities=32% Similarity=0.666 Sum_probs=68.9
Q ss_pred CCCcCCCCEEEEEeCCeeeeeEEEEEEeeCCeeEEEEEEcCCCCCccceeccccccccChHhhhhchhhhhhh
Q 020039 49 SCPYQVNEKVLAFFQSHVYEAKVIQVQYRLKEWTFRVHYLGWNKSWDEWVGVHRLMKDTEANRHRQPVFTKKR 121 (332)
Q Consensus 49 ~~~f~vge~vl~~~~~~~YeAkIl~~~~~~~~~~Y~VHY~GWn~r~DEWV~~~ri~k~t~en~~~qk~L~~~~ 121 (332)
...|.+|++|+|+|++.+|+|+|++++..++..+|||||.|||+||||||+++||+++|++|+++|++|.+++
T Consensus 10 ~~~~~~Gekv~~~~~~~~y~AkIl~i~~~~~~~~YyVHY~GwNkR~DEWV~~~Rl~k~t~en~~~q~~l~~~~ 82 (85)
T 2lrq_A 10 NTLFVDGERVLCFHGPLIYEAKVLKTKPDATPVEYYIHYAGWSKNWDEWVPENRVLKYNDDNVKRRQELARQC 82 (85)
Confidence 3469999999999999999999999999888899999999999999999999999999999999999988765
No 8
>3e9g_A Chromatin modification-related protein EAF3; chromatin remodeling, chromo domain, transcription factor, transcription regulation; 2.50A {Saccharomyces cerevisiae} PDB: 2k3x_A 3e9f_A*
Probab=99.93 E-value=1.1e-26 Score=193.75 Aligned_cols=75 Identities=32% Similarity=0.624 Sum_probs=66.6
Q ss_pred CcCCCCEEEEEeCCeeeeeEEEEEEeeC--------------------------------------CeeEEEEEEcCCCC
Q 020039 51 PYQVNEKVLAFFQSHVYEAKVIQVQYRL--------------------------------------KEWTFRVHYLGWNK 92 (332)
Q Consensus 51 ~f~vge~vl~~~~~~~YeAkIl~~~~~~--------------------------------------~~~~Y~VHY~GWn~ 92 (332)
.|++||+|||||+|++|+|||++|...+ +.++|||||+|||+
T Consensus 7 ~f~~gE~VlcfHg~~~YeAKIl~i~d~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~Y~VHY~GWn~ 86 (130)
T 3e9g_A 7 EFALGGRCLAFHGPLMYEAKILKIWDPSSKMYTSIPNDKPGGSSQATKEIKPQKLGEDESIPEEIINGKCFFIHYQGWKS 86 (130)
T ss_dssp CCCTTCEEEEEETTEEEEEEEEEEEETTTTEEEECC--------------CCBCCCTTCCCCTTTTTSCEEEEEETTSCG
T ss_pred cccCCCEEEEEeCCcceeeEEEEeeCCCcceeecccccccccccccccccccccccccccCchhhccCceEEEEeCCCCC
Confidence 5999999999999999999999995311 23589999999999
Q ss_pred CccceeccccccccChHhhhhchhhhhhhhhhh
Q 020039 93 SWDEWVGVHRLMKDTEANRHRQPVFTKKRDEDK 125 (332)
Q Consensus 93 r~DEWV~~~ri~k~t~en~~~qk~L~~~~~~~k 125 (332)
+|||||+++||+++|++|+++|++|.++++.++
T Consensus 87 ~WDEWV~e~rvlk~~eeN~~lqk~L~~~a~~~~ 119 (130)
T 3e9g_A 87 SWDEWVGYDRIRAYNEENIAMKKRLANEAKEAK 119 (130)
T ss_dssp GGCEEEETTTEECSSHHHHHHHHHHHHHHHHHH
T ss_pred ChhhccCHhhhhccCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999988875443
No 9
>2k3y_A Chromatin modification-related protein EAF3; dimethylated histone H3K36, EAF3-H3K36ME2 fusion, chromo barrel domain, histone deacetylase; HET: M2L; NMR {Saccharomyces cerevisiae}
Probab=99.93 E-value=3.8e-26 Score=193.77 Aligned_cols=72 Identities=32% Similarity=0.638 Sum_probs=64.7
Q ss_pred CcCCCCEEEEEeCCeeeeeEEEEEEe------eC---------------------C-----------eeEEEEEEcCCCC
Q 020039 51 PYQVNEKVLAFFQSHVYEAKVIQVQY------RL---------------------K-----------EWTFRVHYLGWNK 92 (332)
Q Consensus 51 ~f~vge~vl~~~~~~~YeAkIl~~~~------~~---------------------~-----------~~~Y~VHY~GWn~ 92 (332)
.|++|++|||||++++|+||||++.. .+ + +.+|||||+|||+
T Consensus 9 ~f~~gekvl~~hg~llYeAKVl~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~Y~VHY~GWn~ 88 (136)
T 2k3y_A 9 EFALGGRVLAFHGPLMYEAKILKIWDPSSKMYTSIPNDKPGGSSQATKEIKPQKLGEDESIPEEIINGKSFFIHYQGWKS 88 (136)
T ss_dssp SCCTTSEEEEECSSCEEEEEEEEEEETTTTEEEECSSCCCTTCSCCCSSBCCCCSCSSCCCCHHHHTSCEEEECCTTSCG
T ss_pred ccCCCCEEEEEECCeeEEEEEEEEEeccccccccccccccccccccccccccccccccccCcccccccceEEEEeCCcCC
Confidence 59999999999999999999999985 11 1 1299999999999
Q ss_pred CccceeccccccccChHhhhhchhhhhhhh
Q 020039 93 SWDEWVGVHRLMKDTEANRHRQPVFTKKRD 122 (332)
Q Consensus 93 r~DEWV~~~ri~k~t~en~~~qk~L~~~~~ 122 (332)
||||||+++||+++|++|+++|++|..+++
T Consensus 89 rwDEWV~~dRil~~~eeN~~~qKeL~~kak 118 (136)
T 2k3y_A 89 SWDEWVGYDRIRAYNEENIAMKKRLANEAG 118 (136)
T ss_dssp GGCEEEETTTEEESCHHHHHHHHHHHHHSC
T ss_pred cceeeecHhhhhhCCHhHhHHHHHHHHHHH
Confidence 999999999999999999999999987763
No 10
>2lcc_A AT-rich interactive domain-containing protein 4A; chromobarrel domain, RBBP1, transcription; NMR {Homo sapiens}
Probab=99.87 E-value=1.7e-22 Score=155.99 Aligned_cols=63 Identities=29% Similarity=0.549 Sum_probs=59.6
Q ss_pred CcCCCCEEEEEeC----CeeeeeEEEEEEeeCCeeEEEEEEcCCCCCccceeccccccccChHhhhh
Q 020039 51 PYQVNEKVLAFFQ----SHVYEAKVIQVQYRLKEWTFRVHYLGWNKSWDEWVGVHRLMKDTEANRHR 113 (332)
Q Consensus 51 ~f~vge~vl~~~~----~~~YeAkIl~~~~~~~~~~Y~VHY~GWn~r~DEWV~~~ri~k~t~en~~~ 113 (332)
.|.+|++|+|+++ +.+|+|+|++++..++..+|||||.|||+||||||+++||++++++|+..
T Consensus 5 ~~~vGekV~~~~~d~k~~~~y~AkIl~i~~~~~~~~Y~VHY~gwnkr~DEWV~~~ri~~~~~~~~~~ 71 (76)
T 2lcc_A 5 PCLTGTKVKVKYGRGKTQKIYEASIKSTEIDDGEVLYLVHYYGWNVRYDEWVKADRIIWPLDKGLEH 71 (76)
T ss_dssp CSSTTCEEEEEEEETTEEEEEEEEEEEEEEETTEEEEEEEETTSCCSSCEEEEGGGEECSSCSSCCC
T ss_pred ccCCCCEEEEEeCCCCCCCEEEEEEEEEEccCCceEEEEEeCCcCCCceEecChhhccccccchhhh
Confidence 5999999999997 69999999999999999999999999999999999999999999999864
No 11
>2ro0_A Histone acetyltransferase ESA1; HAT, chromodomain, tudor domain, RNA binding, activator, chromatin regulator, transcription; NMR {Saccharomyces cerevisiae}
Probab=99.84 E-value=7.2e-21 Score=151.85 Aligned_cols=54 Identities=22% Similarity=0.378 Sum_probs=52.0
Q ss_pred CcCCCCEEEEEeCCeeeeeEEEEEEeeCCeeEEEEEEcCCCCCccceecccccc
Q 020039 51 PYQVNEKVLAFFQSHVYEAKVIQVQYRLKEWTFRVHYLGWNKSWDEWVGVHRLM 104 (332)
Q Consensus 51 ~f~vge~vl~~~~~~~YeAkIl~~~~~~~~~~Y~VHY~GWn~r~DEWV~~~ri~ 104 (332)
.|.+|++|+|++++.+|+|+|++++..++...|||||.|||+||||||+.+||.
T Consensus 23 ~~~vG~kv~v~~~~~~y~AkIl~ir~~~~~~~YyVHY~g~NkRlDEWV~~~rl~ 76 (92)
T 2ro0_A 23 DIIIKCQCWVQKNDEERLAEILSINTRKAPPKFYVHYVNYNKRLDEWITTDRIN 76 (92)
T ss_dssp SCCTTCEEEEEETTEEEEEEEEEEECSSSSCEEEEEETTSCTTSCEEEEGGGEE
T ss_pred cccCCCEEEEEECCEEEEEEEEEEEEcCCCcEEEEEeCCcCcccccccCHhHcc
Confidence 599999999999999999999999998899999999999999999999999994
No 12
>2rnz_A Histone acetyltransferase ESA1; HAT, chromodomain, tudor domain, RNA binding, activator, chromatin regulator, transcription; NMR {Saccharomyces cerevisiae}
Probab=99.81 E-value=2.1e-20 Score=149.34 Aligned_cols=54 Identities=22% Similarity=0.378 Sum_probs=52.0
Q ss_pred CcCCCCEEEEEeCCeeeeeEEEEEEeeCCeeEEEEEEcCCCCCccceecccccc
Q 020039 51 PYQVNEKVLAFFQSHVYEAKVIQVQYRLKEWTFRVHYLGWNKSWDEWVGVHRLM 104 (332)
Q Consensus 51 ~f~vge~vl~~~~~~~YeAkIl~~~~~~~~~~Y~VHY~GWn~r~DEWV~~~ri~ 104 (332)
.|.+|++|+|++++.+|+|+|++++..++...|||||.|||+||||||+.+||.
T Consensus 25 ~~~vG~kv~v~~~~~~yeAeIl~ir~~~g~~~YYVHY~g~NkRlDEWV~~~RI~ 78 (94)
T 2rnz_A 25 DIIIKCQCWVQKNDEERLAEILSINTRKAPPKFYVHYVNYNKRLDEWITTDRIN 78 (94)
T ss_dssp GCCTTEEEEEECSSCEEEEEEEEEECSSSSCEEEEECTTSCSTTCEEEETTTBC
T ss_pred cccCCCEEEEEECCEEEEEEEEEEEEcCCCcEEEEEeCCcCcccccccCHHHcc
Confidence 499999999999999999999999998899999999999999999999999994
No 13
>2eko_A Histone acetyltransferase htatip; chromo domain, histone tail, chromatin organization modifier, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.80 E-value=3.9e-20 Score=146.08 Aligned_cols=54 Identities=24% Similarity=0.327 Sum_probs=51.3
Q ss_pred CcCCCCEEEEEe-----CCeeeeeEEEEEEeeCCeeEEEEEEcCCCCCccceecccccc
Q 020039 51 PYQVNEKVLAFF-----QSHVYEAKVIQVQYRLKEWTFRVHYLGWNKSWDEWVGVHRLM 104 (332)
Q Consensus 51 ~f~vge~vl~~~-----~~~~YeAkIl~~~~~~~~~~Y~VHY~GWn~r~DEWV~~~ri~ 104 (332)
.|.+|++|+|+| ++.+|+|+|++++..++..+|||||.|||+||||||+.+||.
T Consensus 9 ~~~vG~kv~v~~~~~~~~~~~y~AkIl~i~~~~~~~~YyVHY~g~NkRlDEWV~~~rl~ 67 (87)
T 2eko_A 9 EIIEGCRLPVLRRNQDNEDEWPLAEILSVKDISGRKLFYVHYIDFNRRLDEWVTHERLD 67 (87)
T ss_dssp SCCTTCEEEBCEECTTCCEECCEEEEEEECCSSSCCCEEEEECSSCSCCCEEECTTTBC
T ss_pred cccCCCEEEEEEcccCCCCeEEEEEEEEEEEcCCCcEEEEEeCCCCcccccccCHhHcc
Confidence 599999999998 679999999999998889999999999999999999999995
No 14
>2bud_A Males-absent on the first protein; transferase, MOF, HAT, acetyl-transfer, dosage compensation complex, DCC, royal family; NMR {Drosophila melanogaster} SCOP: b.34.13.3
Probab=99.79 E-value=7.6e-20 Score=145.06 Aligned_cols=55 Identities=25% Similarity=0.459 Sum_probs=50.4
Q ss_pred CCEEEEEe-CCeeeeeEEEEEEeeC---CeeEEEEEEcCCCCCccceeccccccccChH
Q 020039 55 NEKVLAFF-QSHVYEAKVIQVQYRL---KEWTFRVHYLGWNKSWDEWVGVHRLMKDTEA 109 (332)
Q Consensus 55 ge~vl~~~-~~~~YeAkIl~~~~~~---~~~~Y~VHY~GWn~r~DEWV~~~ri~k~t~e 109 (332)
|++|+|+| ++.+|+|+|++++... +..+|||||.|||+||||||+.+||++.+++
T Consensus 18 ~e~vlc~~~dg~~yeAeIl~ir~~~~~~~~~~YYVHY~g~NkRlDEWV~~~RL~~~~~~ 76 (92)
T 2bud_A 18 DKIYFIRREDGTVHRGQVLQSRTTENAAAPDEYYVHYVGLNRRLDGWVGRHRISDNADD 76 (92)
T ss_dssp TSCEEEECTTSCEEEEEEEEEECTTTCSSCCEEEEECSSSCTTTCEEEETTTEESCHHH
T ss_pred CCEEEEEeCCCCEEEEEEEEEeeccCCCCCcEEEEEeCCcccccccccCHHHhchhccc
Confidence 67999999 6899999999999865 5789999999999999999999999998665
No 15
>1wgs_A MYST histone acetyltransferase 1; tudor domain, MYST family, struct genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.34.13.3
Probab=99.78 E-value=3.1e-19 Score=151.59 Aligned_cols=55 Identities=35% Similarity=0.479 Sum_probs=50.9
Q ss_pred CcCCCCEEEEEeC-CeeeeeEEEEEEee--CCeeEEEEEEcCCCCCccceeccccccc
Q 020039 51 PYQVNEKVLAFFQ-SHVYEAKVIQVQYR--LKEWTFRVHYLGWNKSWDEWVGVHRLMK 105 (332)
Q Consensus 51 ~f~vge~vl~~~~-~~~YeAkIl~~~~~--~~~~~Y~VHY~GWn~r~DEWV~~~ri~k 105 (332)
.|.+|++|+|+|+ +.||+|+|++++.. .+..+|||||.|||+||||||+++||..
T Consensus 12 ~~~vGe~v~~~~~d~~~y~AkIl~i~~~~~~~~~~YyVHY~gwNkR~DEWV~~~ri~~ 69 (133)
T 1wgs_A 12 TVEIGETYLCRRPDSTWHSAEVIQSRVNDQEGREEFYVHYVGFNRRLDEWVDKNRLAL 69 (133)
T ss_dssp CCCTTSEEEEEETTTEEEEEEEEEEEEETTTTEEEEEEECTTTCSSCCEEECTTTSCC
T ss_pred ccCCCCEEEEEeCCCCEEEEEEEEEEeccCCCceEEEEeccCcCCCceeecChhhccc
Confidence 5999999999997 79999999999974 5789999999999999999999999964
No 16
>2eqm_A PHD finger protein 20-like 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2jtf_A
Probab=99.42 E-value=2.6e-13 Score=107.40 Aligned_cols=64 Identities=22% Similarity=0.505 Sum_probs=52.6
Q ss_pred CCCCCCCCCcCCCCEEEEEeC-CeeeeeEEEEEEeeCCeeEEEEEEcCCCCCccceeccc--cccccCh
Q 020039 43 CPPTPASCPYQVNEKVLAFFQ-SHVYEAKVIQVQYRLKEWTFRVHYLGWNKSWDEWVGVH--RLMKDTE 108 (332)
Q Consensus 43 ~~~~~~~~~f~vge~vl~~~~-~~~YeAkIl~~~~~~~~~~Y~VHY~GWn~r~DEWV~~~--ri~k~t~ 108 (332)
.||..+...|++|++|.|.+. +.+|+|+|+.+... +..|+|||.||+.+|||||+.+ +|++..-
T Consensus 11 ~~~~~~~~~F~vGmkLEA~D~~~~~~~a~i~~v~~~--~~~v~VHfdGW~~~yDeWv~~dS~~I~P~g~ 77 (88)
T 2eqm_A 11 KPPNRPGITFEIGARLEALDYLQKWYPSRIEKIDYE--EGKMLVHFERWSHRYDEWIYWDSNRLRPLER 77 (88)
T ss_dssp SCCSCSSCCCCSSCEEEEECTTSCEEEEEEEEEETT--TTEEEEEESSSTTTEEEEEETTSCCEECCCC
T ss_pred CCCCCCcCcCCCCCEEEEEcCCCCeeEEEEEEEecc--CCEEEEEECCCCCcccEEeeCCCCcEecccc
Confidence 355556668999999988873 57899999988754 3489999999999999999987 8887643
No 17
>3sd4_A PHD finger protein 20; tudor domain, transcription; 1.93A {Homo sapiens} PDB: 3q1j_A
Probab=99.25 E-value=1.2e-11 Score=93.38 Aligned_cols=57 Identities=25% Similarity=0.539 Sum_probs=46.7
Q ss_pred CCCCCCCCCcCCCCEEEEEeC-CeeeeeEEEEEEeeCCeeEEEEEEcCCCCCccceeccc
Q 020039 43 CPPTPASCPYQVNEKVLAFFQ-SHVYEAKVIQVQYRLKEWTFRVHYLGWNKSWDEWVGVH 101 (332)
Q Consensus 43 ~~~~~~~~~f~vge~vl~~~~-~~~YeAkIl~~~~~~~~~~Y~VHY~GWn~r~DEWV~~~ 101 (332)
.||++++..|++|.+|.|.+. +.+|+|+|++|... +..++|||.||+.+||+|+..+
T Consensus 4 ~p~~~~~~~F~vGmkLEa~d~~~p~~~AtV~~v~~~--~~~~~VhfdGw~~~~D~W~~~d 61 (69)
T 3sd4_A 4 HPPNRRGISFEVGAQLEARDRLKNWYPAHIEDIDYE--EGKVLIHFKRWNHRYDEWFCWD 61 (69)
T ss_dssp CCCCCTTCCCSTTCEEEEECTTSCEEEEEEEEEETT--TTEEEEEETTSCGGGCEEEETT
T ss_pred CCCCCCCCCcCCCCEEEEEECCCCccccEEEEEecc--CCEEEEEeCCCCCCCCEEEcCC
Confidence 456667778999999988764 34599999999643 3478999999999999999875
No 18
>3h8z_A FragIle X mental retardation syndrome-related Pro; tudor domains, FXR2, structura genomics, structural genomics consortium, SGC; 1.92A {Homo sapiens} PDB: 3o8v_A 3kuf_A 2bkd_N*
Probab=98.59 E-value=7.7e-08 Score=80.85 Aligned_cols=60 Identities=17% Similarity=0.249 Sum_probs=44.6
Q ss_pred CCCCCCCCcCCCCEEEEEeCC------eeeeeEEEEEEeeCCeeEEEEEEcCCCCCccceeccccccccC
Q 020039 44 PPTPASCPYQVNEKVLAFFQS------HVYEAKVIQVQYRLKEWTFRVHYLGWNKSWDEWVGVHRLMKDT 107 (332)
Q Consensus 44 ~~~~~~~~f~vge~vl~~~~~------~~YeAkIl~~~~~~~~~~Y~VHY~GWn~r~DEWV~~~ri~k~t 107 (332)
||..+...|.+|++|-||+.. -||.|+|++++. ..|+|+|.||...|+|||+.+||+.-+
T Consensus 53 P~~~~~~~f~~gd~VEV~~~~~d~ep~gWw~a~I~~~kg----~f~~V~y~~~~~~~~EiV~~~rlR~~n 118 (128)
T 3h8z_A 53 PPADYNKEITEGDEVEVYSRANEQEPCGWWLARVRMMKG----DFYVIEYAACDATYNEIVTLERLRPVN 118 (128)
T ss_dssp CCC----CCCTTCEEEEEECC---CCCEEEEEEEEEEET----TEEEEEETTC----CEEECGGGEEECC
T ss_pred CCcccccCCCCCCEEEEEecCCCCCcCccEEEEEEEeeC----CEEEEEEcCCCCCcceEEehhheEeCC
Confidence 333455679999999999852 599999999974 489999999999999999999998654
No 19
>4a4f_A SurviVal of motor neuron-related-splicing factor; RNA binding protein; HET: 2MR; NMR {Homo sapiens} PDB: 4a4h_A*
Probab=97.90 E-value=2.5e-05 Score=57.63 Aligned_cols=58 Identities=19% Similarity=0.344 Sum_probs=46.9
Q ss_pred CCCCCCcCCCCEEEEEe--CCeeeeeEEEEEEeeCCeeEEEEEEcCCCCCccceeccccccccC
Q 020039 46 TPASCPYQVNEKVLAFF--QSHVYEAKVIQVQYRLKEWTFRVHYLGWNKSWDEWVGVHRLMKDT 107 (332)
Q Consensus 46 ~~~~~~f~vge~vl~~~--~~~~YeAkIl~~~~~~~~~~Y~VHY~GWn~r~DEWV~~~ri~k~t 107 (332)
++|+..+++|+.|+|.+ .+.||.|+|+++...+ ..|.|+|.+|..+ |.|+.++|...+
T Consensus 3 ~~~~~~~~vGd~c~A~~s~Dg~wYrA~I~~v~~~~--~~~~V~fvdYGn~--e~V~~~~Lrpl~ 62 (64)
T 4a4f_A 3 TQPTHSWKVGDKCMAVWSEDGQCYEAEIEEIDEEN--GTAAITFAGYGNA--EVTPLLNLKPVE 62 (64)
T ss_dssp SCCSSCCCTTCEEEEECTTTSSEEEEEEEEEETTT--TEEEEEETTTTEE--EEEEGGGEECCS
T ss_pred CCcCCCCCCCCEEEEEECCCCCEEEEEEEEEcCCC--CEEEEEEEecCCE--EEEeHHHcEeCC
Confidence 34666799999999997 4899999999998532 3699999999664 889988887653
No 20
>2equ_A PHD finger protein 20-like 1; tudor domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.56 E-value=0.00013 Score=55.61 Aligned_cols=54 Identities=20% Similarity=0.264 Sum_probs=45.0
Q ss_pred CCCcCCCCEEEEEe-CCeeeeeEEEEEEeeCCeeEEEEEEcCCCCCccceeccccccccCh
Q 020039 49 SCPYQVNEKVLAFF-QSHVYEAKVIQVQYRLKEWTFRVHYLGWNKSWDEWVGVHRLMKDTE 108 (332)
Q Consensus 49 ~~~f~vge~vl~~~-~~~~YeAkIl~~~~~~~~~~Y~VHY~GWn~r~DEWV~~~ri~k~t~ 108 (332)
...|++|+.|++.| .+.||+|+|.++... ..|.|.|.++|. |-|+..+|....+
T Consensus 7 ~~~~kvGd~clA~wsDg~~Y~A~I~~v~~~---~~~~V~f~Dyn~---e~v~~~~lrplp~ 61 (74)
T 2equ_A 7 GFDFKAGEEVLARWTDCRYYPAKIEAINKE---GTFTVQFYDGVI---RCLKRMHIKAMPE 61 (74)
T ss_dssp CCCCCTTCEEEEECSSSSEEEEEEEEESTT---SSEEEEETTSCE---EEECGGGEECCCG
T ss_pred CCCCCCCCEEEEECCCCCEEEEEEEEECCC---CEEEEEEecCCe---EEecHHHCeeCCh
Confidence 34699999999998 579999999999642 379999999876 9999998877654
No 21
>1mhn_A SurviVal motor neuron protein; SMN, SMA, spinal muscular atrophy, RNA binding protein; 1.80A {Homo sapiens} SCOP: b.34.9.1 PDB: 4a4e_A* 4a4g_A*
Probab=97.55 E-value=0.00014 Score=52.65 Aligned_cols=53 Identities=21% Similarity=0.427 Sum_probs=43.7
Q ss_pred CcCCCCEEEEEe--CCeeeeeEEEEEEeeCCeeEEEEEEcCCCCCccceeccccccccC
Q 020039 51 PYQVNEKVLAFF--QSHVYEAKVIQVQYRLKEWTFRVHYLGWNKSWDEWVGVHRLMKDT 107 (332)
Q Consensus 51 ~f~vge~vl~~~--~~~~YeAkIl~~~~~~~~~~Y~VHY~GWn~r~DEWV~~~ri~k~t 107 (332)
.|++|+.|+|.+ .+.||.|+|+++... ...|.|+|.+|..+ |-|+.++|+..+
T Consensus 3 ~~~~G~~c~A~~s~Dg~wYrA~I~~i~~~--~~~~~V~f~DYGn~--e~v~~~~Lr~~~ 57 (59)
T 1mhn_A 3 QWKVGDKCSAIWSEDGCIYPATIASIDFK--RETCVVVYTGYGNR--EEQNLSDLLSPI 57 (59)
T ss_dssp CCCTTCEEEEECTTTSCEEEEEEEEEETT--TTEEEEEETTTTEE--EEEEGGGCBCTT
T ss_pred cCCcCCEEEEEECCCCCEEEEEEEEEcCC--CCEEEEEEEcCCCE--EEEcHHHeeCCC
Confidence 489999999997 479999999998542 34799999999874 888888887654
No 22
>1wjq_A KIAA1798 protein; MBT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.9.3
Probab=97.52 E-value=0.00014 Score=59.06 Aligned_cols=51 Identities=22% Similarity=0.475 Sum_probs=43.7
Q ss_pred CcCCCCEEEEEeC---CeeeeeEEEEEEeeCCeeEEEEEEcCCCCCccceeccc--cccc
Q 020039 51 PYQVNEKVLAFFQ---SHVYEAKVIQVQYRLKEWTFRVHYLGWNKSWDEWVGVH--RLMK 105 (332)
Q Consensus 51 ~f~vge~vl~~~~---~~~YeAkIl~~~~~~~~~~Y~VHY~GWn~r~DEWV~~~--ri~k 105 (332)
.|++|-++.+.+. .+++.|.|.+|. +...+|||.||..++|.|+..+ .|+.
T Consensus 13 ~F~~GMKLEAvD~~~p~~icvATV~~v~----g~rl~v~fDGw~~~~D~W~~~dSpdIhP 68 (107)
T 1wjq_A 13 GFQKKMKLEVVDKRNPMFIRVATVADTD----DHRVKVHFDGWNNCYDYWIDADSPDIHP 68 (107)
T ss_dssp SCCSSCEEEEECTTCTTCEEEEEEEEEC----SSCEEEECSSSCGGGCEEECTTCSSCEE
T ss_pred cCCCCCEEEEEcCCCCCcEEeEEEEEec----CCEEEEEeCCCCCcCCEEEECCCCCccc
Confidence 5999999999985 378999999994 3489999999999999999764 6654
No 23
>2xk0_A Polycomb protein PCL; transcription, aromatic CAGE; NMR {Drosophila melanogaster}
Probab=97.39 E-value=0.00024 Score=52.85 Aligned_cols=52 Identities=15% Similarity=0.323 Sum_probs=40.4
Q ss_pred CCCCcCCCCEEEEEeC-CeeeeeEEEEEEeeCCeeEEEEEEcCCCCCccceecccccccc
Q 020039 48 ASCPYQVNEKVLAFFQ-SHVYEAKVIQVQYRLKEWTFRVHYLGWNKSWDEWVGVHRLMKD 106 (332)
Q Consensus 48 ~~~~f~vge~vl~~~~-~~~YeAkIl~~~~~~~~~~Y~VHY~GWn~r~DEWV~~~ri~k~ 106 (332)
|...|.+||.|||.|. |+.|.+.|++.. ...++|+|..=+. -||...+|.+.
T Consensus 12 pa~~~~~geDVL~rw~DG~fYLGtIVd~~----~~~ClV~FeD~S~---~Wv~~kdi~kl 64 (69)
T 2xk0_A 12 PAVTYALQEDVFIKCNDGRFYLGTIIDQT----SDQYLIRFDDQSE---QWCEPDKLRKL 64 (69)
T ss_dssp CCCCCCTTCEEEEECTTSCEEEEEEEEEC----SSCEEEEETTCCE---EEECTTTEECS
T ss_pred cccccccCCeEEEEecCCCEEEEEEEecC----CceEEEEecCCcc---eeeeHHHHHhh
Confidence 4457999999999995 899999996644 3489999988777 56655666554
No 24
>3s6w_A Tudor domain-containing protein 3; methylated arginine recognize, ISO-propanol, transcri; 1.78A {Homo sapiens} PDB: 3pmt_A*
Probab=97.31 E-value=0.00047 Score=48.79 Aligned_cols=50 Identities=16% Similarity=0.310 Sum_probs=39.6
Q ss_pred CcCCCCEEEEEe--CCeeeeeEEEEEEeeCCeeEEEEEEcCCCCCccceecccccc
Q 020039 51 PYQVNEKVLAFF--QSHVYEAKVIQVQYRLKEWTFRVHYLGWNKSWDEWVGVHRLM 104 (332)
Q Consensus 51 ~f~vge~vl~~~--~~~~YeAkIl~~~~~~~~~~Y~VHY~GWn~r~DEWV~~~ri~ 104 (332)
.|++|+.|+|.+ .+.||.|+|+++... ...|.|+|.++..+ |-|+.++|.
T Consensus 1 ~wk~G~~c~A~~s~Dg~wYrA~I~~i~~~--~~~~~V~fvDYGn~--e~v~~~~lr 52 (54)
T 3s6w_A 1 MWKPGDECFALYWEDNKFYRAEVEALHSS--GMTAVVKFIDYGNY--EEVLLSNIK 52 (54)
T ss_dssp CCCTTCEEEEEETTTTEEEEEEEEEC--C--CSEEEEEETTTCCE--EEEEGGGEE
T ss_pred CCCCCCEEEEEECCCCCEEEEEEEEEeCC--CCEEEEEEEccCCe--EEEeHHHEE
Confidence 378999999998 589999999998643 24789999999875 778777764
No 25
>1g5v_A SurviVal motor neuron protein 1; mRNA processing, translation; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=97.29 E-value=0.00058 Score=53.57 Aligned_cols=54 Identities=20% Similarity=0.404 Sum_probs=45.1
Q ss_pred CCcCCCCEEEEEe--CCeeeeeEEEEEEeeCCeeEEEEEEcCCCCCccceeccccccccC
Q 020039 50 CPYQVNEKVLAFF--QSHVYEAKVIQVQYRLKEWTFRVHYLGWNKSWDEWVGVHRLMKDT 107 (332)
Q Consensus 50 ~~f~vge~vl~~~--~~~~YeAkIl~~~~~~~~~~Y~VHY~GWn~r~DEWV~~~ri~k~t 107 (332)
..+++|+.|++.+ .|.||.|+|.++... ...|.|.|.+|..+ |-|+.++|+...
T Consensus 9 ~~~kvGd~C~A~ys~Dg~wYrA~I~~i~~~--~~~~~V~fiDYGN~--E~V~~~~Lrp~~ 64 (88)
T 1g5v_A 9 QQWKVGDKCSAIWSEDGCIYPATIASIDFK--RETCVVVYTGYGNR--EEQNLSDLLSPI 64 (88)
T ss_dssp CCCCSSCEEEEECTTTCCEEEEEEEEEETT--TTEEEEEETTTCCE--EEEEGGGCBCCC
T ss_pred CCCCCCCEEEEEECCCCCEEEEEEEEecCC--CCEEEEEEecCCCE--EEEcHHHcccCC
Confidence 3589999999998 579999999999653 24799999999875 889999988764
No 26
>2l8d_A Lamin-B receptor; DNA binding protein; NMR {Gallus gallus}
Probab=97.24 E-value=0.00055 Score=50.45 Aligned_cols=53 Identities=15% Similarity=0.156 Sum_probs=40.6
Q ss_pred CCCCcCCCCEEEEEeCC--eeeeeEEEEEEeeCCeeEEEEEEcCCCCCccceeccccccc
Q 020039 48 ASCPYQVNEKVLAFFQS--HVYEAKVIQVQYRLKEWTFRVHYLGWNKSWDEWVGVHRLMK 105 (332)
Q Consensus 48 ~~~~f~vge~vl~~~~~--~~YeAkIl~~~~~~~~~~Y~VHY~GWn~r~DEWV~~~ri~k 105 (332)
|...|++||.|++.|.| +.|+|+|+.+. ...+.|.|-|.. . -.|=+.+.+|.+
T Consensus 6 p~~~~~vgd~VmaRW~Gd~~yYparI~Si~--s~~~~Y~V~fKd-g--T~e~L~~kDIkp 60 (66)
T 2l8d_A 6 PNRKYADGEVVMGRWPGSVLYYEVQVTSYD--DASHLYTVKYKD-G--TELALKESDIRL 60 (66)
T ss_dssp SSSSSCSSCEEEEECTTSSCEEEEEEEEEE--TTTTEEEEEETT-S--CEEEEEGGGEEC
T ss_pred CceEeecCCEEEEEcCCCccceEEEEEEec--cCCceEEEEecC-C--CEEeechhcccc
Confidence 33479999999999965 79999999998 556799999986 2 345555555543
No 27
>2m0o_A PHD finger protein 1; tudor domain, H3K36ME3 binding, peptide binding protein; HET: M3L; NMR {Homo sapiens}
Probab=97.23 E-value=0.00031 Score=53.35 Aligned_cols=53 Identities=15% Similarity=0.135 Sum_probs=41.0
Q ss_pred CCCCCCCCCCCcCCCCEEEEEeC-CeeeeeEEEEEEeeCCeeEEEEEEcCCCCCcc
Q 020039 41 CPCPPTPASCPYQVNEKVLAFFQ-SHVYEAKVIQVQYRLKEWTFRVHYLGWNKSWD 95 (332)
Q Consensus 41 ~~~~~~~~~~~f~vge~vl~~~~-~~~YeAkIl~~~~~~~~~~Y~VHY~GWn~r~D 95 (332)
+|++...|-..|.+||-|||.|. |+.|.++|++|... ...|+|+|..=.+.|=
T Consensus 16 ~p~~~~~p~~~f~eGeDVLarwsDGlfYLGTI~kV~~~--~e~ClV~F~D~S~~W~ 69 (79)
T 2m0o_A 16 SPAPTSGPRPRLWEGQDVLARWTDGLLYLGTIKKVDSA--REVCLVQFEDDSQFLV 69 (79)
T ss_dssp SCCCCCSCCCCCCTTCEEEBCCTTSCCCEEEEEEEETT--TTEEEEEETTSCEEEE
T ss_pred CCCCccCCcceeccCCEEEEEecCCCEEeEEEEEeccC--CCEEEEEEcCCCeEEE
Confidence 44454555567999999999985 89999999999764 3479999987666443
No 28
>3p8d_A Medulloblastoma antigen MU-MB-50.72; tudor domain, lysine-methylated P53 binding, histone binding binding; 2.00A {Homo sapiens}
Probab=97.21 E-value=0.00043 Score=51.69 Aligned_cols=50 Identities=28% Similarity=0.341 Sum_probs=39.2
Q ss_pred CcCCCCEEEEEeC-CeeeeeEEEEEEeeCCeeEEEEEEcCCCCCccceecccccccc
Q 020039 51 PYQVNEKVLAFFQ-SHVYEAKVIQVQYRLKEWTFRVHYLGWNKSWDEWVGVHRLMKD 106 (332)
Q Consensus 51 ~f~vge~vl~~~~-~~~YeAkIl~~~~~~~~~~Y~VHY~GWn~r~DEWV~~~ri~k~ 106 (332)
.|++||+|+|.|+ +.+|+|+|..|... ..|.|.|.+ +. -|-|....|-+.
T Consensus 6 ~~~vGd~vmArW~D~~yYpA~I~si~~~---~~Y~V~F~d-G~--~etvk~~~ikp~ 56 (67)
T 3p8d_A 6 EFQINEQVLACWSDCRFYPAKVTAVNKD---GTYTVKFYD-GV--VQTVKHIHVKAF 56 (67)
T ss_dssp CCCTTCEEEEECTTSCEEEEEEEEECTT---SEEEEEETT-SC--EEEEEGGGEEEC
T ss_pred ccccCCEEEEEcCCCCEeeEEEEEECCC---CeEEEEEeC-Cc--eEEEeHHHcccC
Confidence 4999999999996 58999999999654 469999988 32 366666666554
No 29
>2dig_A Lamin-B receptor; tudor domain, integral nuclear envelope inner membrane protein, nuclear protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=97.16 E-value=0.00069 Score=50.07 Aligned_cols=51 Identities=14% Similarity=0.165 Sum_probs=38.8
Q ss_pred CCCCcCCCCEEEEEeCC--eeeeeEEEEEEeeCCeeEEEEEEcCCCCCccceeccccc
Q 020039 48 ASCPYQVNEKVLAFFQS--HVYEAKVIQVQYRLKEWTFRVHYLGWNKSWDEWVGVHRL 103 (332)
Q Consensus 48 ~~~~f~vge~vl~~~~~--~~YeAkIl~~~~~~~~~~Y~VHY~GWn~r~DEWV~~~ri 103 (332)
|...|++||.|++.|.| +.|+|+|+.+. ...+.|.|-|.. . -.|=+.+.+|
T Consensus 9 p~~~f~vgd~VmaRW~Gd~~yYparItSit--s~~~~Y~VkfKd-g--T~e~L~~kDI 61 (68)
T 2dig_A 9 PSRKFADGEVVRGRWPGSSLYYEVEILSHD--STSQLYTVKYKD-G--TELELKENDI 61 (68)
T ss_dssp CCCSSCSSCEEEEECTTTCCEEEEEEEEEE--TTTTEEEEECTT-S--CEEEEETTTE
T ss_pred CceEeecCCEEEEEccCCccceEEEEEEec--cCCceEEEEecC-C--CEEEechhcc
Confidence 33479999999999965 79999999998 556799999976 2 2344444444
No 30
>2biv_A SCML2 protein, sex COMB on midleg-like protein 2; MBT, malignant brain tumor, transcription factor; 1.7A {Homo sapiens} SCOP: b.34.9.3 b.34.9.3 PDB: 1oi1_A 2vyt_A* 2p0k_A
Probab=97.12 E-value=0.00083 Score=61.98 Aligned_cols=56 Identities=18% Similarity=0.346 Sum_probs=45.9
Q ss_pred CCCCCCcCCCCEEEEEeC---CeeeeeEEEEEEeeCCeeEEEEEEcCCCCCccceeccc--cccc
Q 020039 46 TPASCPYQVNEKVLAFFQ---SHVYEAKVIQVQYRLKEWTFRVHYLGWNKSWDEWVGVH--RLMK 105 (332)
Q Consensus 46 ~~~~~~f~vge~vl~~~~---~~~YeAkIl~~~~~~~~~~Y~VHY~GWn~r~DEWV~~~--ri~k 105 (332)
.++...|++|.++.+.+. .+++.|.|.+|.. ..++|||.||..++|.|+..+ +|+.
T Consensus 166 ~~~~~~F~~GmKLEavD~~~p~~icvATV~~v~g----~rl~v~fDgw~~~~D~W~~~dSp~I~P 226 (243)
T 2biv_A 166 KPPLNNFKVGMKLEAIDKKNPYLICPATIGDVKG----DEVHITFDGWSGAFDYWCKYDSRDIFP 226 (243)
T ss_dssp CCSSCCCCTTCEEEEECTTSTTCEEEEEEEEEET----TEEEEEETTSCGGGCEEEETTCTTEEC
T ss_pred CCccccccCCCEEEEEccCCCCeEEEEEEEEecC----CEEEEEECCCCCcCCEEEeCCCCCeec
Confidence 334457999999999985 4899999999974 368999999999999999874 4543
No 31
>3qii_A PHD finger protein 20; tudor domain, structural genomics, structural GE consortium, SGC, transcription regulator; 2.30A {Homo sapiens}
Probab=96.85 E-value=0.0012 Score=51.33 Aligned_cols=50 Identities=28% Similarity=0.341 Sum_probs=39.6
Q ss_pred CcCCCCEEEEEeC-CeeeeeEEEEEEeeCCeeEEEEEEcCCCCCccceecccccccc
Q 020039 51 PYQVNEKVLAFFQ-SHVYEAKVIQVQYRLKEWTFRVHYLGWNKSWDEWVGVHRLMKD 106 (332)
Q Consensus 51 ~f~vge~vl~~~~-~~~YeAkIl~~~~~~~~~~Y~VHY~GWn~r~DEWV~~~ri~k~ 106 (332)
.|.+||+|+|.|+ +.+|+|+|+.|... ..|.|-|.+ +. -+-|....|-+.
T Consensus 21 ~f~vGd~VlArW~D~~yYPAkI~sV~~~---~~YtV~F~D-G~--~etvk~~~IKp~ 71 (85)
T 3qii_A 21 EFQINEQVLACWSDCRFYPAKVTAVNKD---GTYTVKFYD-GV--VQTVKHIHVKAF 71 (85)
T ss_dssp CCCTTCEEEEECTTSCEEEEEEEEECTT---SEEEEEETT-SC--EEEEEGGGEEEC
T ss_pred ccccCCEEEEEeCCCCEeeEEEEEECCC---CeEEEEEeC-CC--eEEecHHHcccC
Confidence 6999999999996 58999999999654 369999987 32 366776666554
No 32
>4hcz_A PHD finger protein 1; protein-peptide complex, tudor, histone binding, H3K36ME3, N nucleus, transcription; HET: M3L; 1.85A {Homo sapiens}
Probab=96.84 E-value=0.0013 Score=47.39 Aligned_cols=45 Identities=16% Similarity=0.149 Sum_probs=36.5
Q ss_pred CcCCCCEEEEEeC-CeeeeeEEEEEEeeCCeeEEEEEEcCCCCCccce
Q 020039 51 PYQVNEKVLAFFQ-SHVYEAKVIQVQYRLKEWTFRVHYLGWNKSWDEW 97 (332)
Q Consensus 51 ~f~vge~vl~~~~-~~~YeAkIl~~~~~~~~~~Y~VHY~GWn~r~DEW 97 (332)
.|.+||.|||.|. |+.|.|+|++|... ...|+|+|..=.+.|=+|
T Consensus 3 ~f~~GedVLarwsDG~fYlGtI~~V~~~--~~~clV~F~D~s~~W~~~ 48 (58)
T 4hcz_A 3 RLWEGQDVLARWTDGLLYLGTIKKVDSA--REVCLVQFEDDSQFLVLW 48 (58)
T ss_dssp SCCTTCEEEEECTTSCEEEEEEEEEETT--TTEEEEEETTSCEEEEEG
T ss_pred ccccCCEEEEEecCCCEEeEEEEEEecC--CCEEEEEEcCCCeEEEEh
Confidence 4999999999985 79999999998654 448999998777744444
No 33
>2r58_A Polycomb protein SCM; MBT repeat, sex COMB on midleg, DI-methyl lysine, regulator, developmental protein, metal-binding, nucleus; HET: MLY; 2.00A {Drosophila melanogaster} PDB: 2r57_A* 2r5a_A* 2r5m_A*
Probab=96.77 E-value=0.0027 Score=59.32 Aligned_cols=55 Identities=20% Similarity=0.389 Sum_probs=45.6
Q ss_pred CCCCCcCCCCEEEEEeC---CeeeeeEEEEEEeeCCeeEEEEEEcCCCCCccceeccc--cccc
Q 020039 47 PASCPYQVNEKVLAFFQ---SHVYEAKVIQVQYRLKEWTFRVHYLGWNKSWDEWVGVH--RLMK 105 (332)
Q Consensus 47 ~~~~~f~vge~vl~~~~---~~~YeAkIl~~~~~~~~~~Y~VHY~GWn~r~DEWV~~~--ri~k 105 (332)
.....|++|.++.+.+. .+++.|.|.+|.. ...+|||.||...+|.|+..+ +|+.
T Consensus 139 ~~~~~F~vGMKLEavD~~np~~icvATV~~v~g----~rl~v~fDGw~~~~D~W~~~~Sp~I~P 198 (265)
T 2r58_A 139 PEENLFKVGQKLEAVDKKNPQLICCATVDAIKD----DQIHVTFDGWRGAFDYWCNYRSRDIFP 198 (265)
T ss_dssp CSSCCCCTTCEEEEECTTSTTCEEEEEEEEEET----TEEEEEETTSCGGGCEEEETTCTTEEC
T ss_pred CcccccccCcEEEeccCCCCCCEEEEEEEEecC----CEEEEEeCCCCCcCCEEEECCCCCeec
Confidence 34446999999999874 5899999999963 479999999999999999874 5654
No 34
>2eqj_A Metal-response element-binding transcription factor 2; structure genomics,tudor domain, zinc-regulated factor 1, ZIRF1; NMR {Mus musculus}
Probab=96.57 E-value=0.0034 Score=46.47 Aligned_cols=41 Identities=15% Similarity=0.223 Sum_probs=33.7
Q ss_pred CcCCCCEEEEEeC-CeeeeeEEEEEEeeCCeeEEEEEEcCCCCC
Q 020039 51 PYQVNEKVLAFFQ-SHVYEAKVIQVQYRLKEWTFRVHYLGWNKS 93 (332)
Q Consensus 51 ~f~vge~vl~~~~-~~~YeAkIl~~~~~~~~~~Y~VHY~GWn~r 93 (332)
.|.+||-|||.|. |+.|+|+|.+|... .-.|+|.|..=.++
T Consensus 13 ~f~vGddVLA~wtDGl~Y~gtI~~V~~~--~gtC~V~F~D~s~~ 54 (66)
T 2eqj_A 13 KFEEGQDVLARWSDGLFYLGTIKKINIL--KQSCFIIFEDSSKS 54 (66)
T ss_dssp CSCTTCEEEEECTTSCEEEEEEEEEETT--TTEEEEEETTTEEE
T ss_pred cccCCCEEEEEEccCcEEEeEEEEEccC--CcEEEEEEccCCEE
Confidence 6999999999985 79999999999764 24789998765553
No 35
>3pnw_C Tudor domain-containing protein 3; FAB, structural genomics consortium, antibody, SGC, protein immune system complex; 2.05A {Homo sapiens}
Probab=96.53 E-value=0.005 Score=46.89 Aligned_cols=54 Identities=15% Similarity=0.254 Sum_probs=43.2
Q ss_pred CcCCCCEEEEEe--CCeeeeeEEEEEEeeCCeeEEEEEEcCCCCCccceeccccccccCh
Q 020039 51 PYQVNEKVLAFF--QSHVYEAKVIQVQYRLKEWTFRVHYLGWNKSWDEWVGVHRLMKDTE 108 (332)
Q Consensus 51 ~f~vge~vl~~~--~~~~YeAkIl~~~~~~~~~~Y~VHY~GWn~r~DEWV~~~ri~k~t~ 108 (332)
.+++|+.|+|.+ .+.||.|+|+++... ...|.|.|.++.. -|-|+.++|.....
T Consensus 17 ~~kvGd~C~A~ys~Dg~wYRA~I~~i~~~--~~~~~V~fvDYGN--~e~V~~~~Lr~l~~ 72 (77)
T 3pnw_C 17 MWKPGDECFALYWEDNKFYRAEVEALHSS--GMTAVVKFIDYGN--YEEVLLSNIKPIQT 72 (77)
T ss_dssp TCCTTCEEEEEETTTTEEEEEEEEEECTT--SSEEEEEETTTCC--EEEEEGGGEECC--
T ss_pred CCCcCCEEEEEECCCCCEEEEEEEEEeCC--CCEEEEEEEcCCC--eEEEeHHHeEECCh
Confidence 588999999998 589999999998643 2478999999977 47888888876643
No 36
>2d9t_A Tudor domain-containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.34.9.1
Probab=96.51 E-value=0.0042 Score=47.33 Aligned_cols=54 Identities=15% Similarity=0.227 Sum_probs=44.1
Q ss_pred CCcCCCCEEEEEe--CCeeeeeEEEEEEeeCCeeEEEEEEcCCCCCccceeccccccccC
Q 020039 50 CPYQVNEKVLAFF--QSHVYEAKVIQVQYRLKEWTFRVHYLGWNKSWDEWVGVHRLMKDT 107 (332)
Q Consensus 50 ~~f~vge~vl~~~--~~~~YeAkIl~~~~~~~~~~Y~VHY~GWn~r~DEWV~~~ri~k~t 107 (332)
..+++|+.|++.+ .+.||.|+|+++... ...|.|.|.+|... |-|+.++|+...
T Consensus 8 ~~~~~G~~c~A~~s~Dg~wYRA~I~~i~~~--~~~~~V~fiDYGN~--e~V~~~~Lr~l~ 63 (78)
T 2d9t_A 8 KVWKPGDECFALYWEDNKFYRAEVEALHSS--GMTAVVKFTDYGNY--EEVLLSNIKPVQ 63 (78)
T ss_dssp CCCCTTCEEEEECTTTCCEEEEEEEEECSS--SSEEEEEETTTTEE--EEEEGGGEEECC
T ss_pred cCCCcCCEEEEEECCCCCEEEEEEEEEeCC--CCEEEEEEEcCCCe--EEEcHHHeEeCC
Confidence 3578999999998 579999999998642 35799999999774 888888887654
No 37
>2e5p_A Protein PHF1, PHD finger protein 1; tudor domain, PHF1 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.31 E-value=0.0042 Score=45.97 Aligned_cols=52 Identities=13% Similarity=0.052 Sum_probs=38.9
Q ss_pred CCCCcCCCCEEEEEeC-CeeeeeEEEEEEeeCCeeEEEEEEcCCCCCccceecccccc
Q 020039 48 ASCPYQVNEKVLAFFQ-SHVYEAKVIQVQYRLKEWTFRVHYLGWNKSWDEWVGVHRLM 104 (332)
Q Consensus 48 ~~~~f~vge~vl~~~~-~~~YeAkIl~~~~~~~~~~Y~VHY~GWn~r~DEWV~~~ri~ 104 (332)
+...|.+|+-|||.|. |+.|.++|.+|... ...++|+|..=.+. ||....|.
T Consensus 6 ~~~~f~eGqdVLarWsDGlfYlGtV~kV~~~--~~~ClV~FeD~s~~---wv~~kdi~ 58 (68)
T 2e5p_A 6 SGPRLWEGQDVLARWTDGLLYLGTIKKVDSA--REVCLVQFEDDSQF---LVLWKDIS 58 (68)
T ss_dssp CCCCCCTTCEEEEECTTSSEEEEEEEEEETT--TTEEEEEETTTEEE---EEETTTEE
T ss_pred CCcccccCCEEEEEecCCcEEEeEEEEEecC--CcEEEEEEccCCee---eeeeeccc
Confidence 3346999999999995 79999999999753 34799999766653 44444443
No 38
>2ldm_A Uncharacterized protein; PHF20, tudor domain, epigenetics, methylated P53, transcript factor, transcription-protein binding complex; HET: M2L; NMR {Homo sapiens}
Probab=95.14 E-value=0.00087 Score=51.81 Aligned_cols=50 Identities=30% Similarity=0.340 Sum_probs=40.6
Q ss_pred CcCCCCEEEEEe-CCeeeeeEEEEEEeeCCeeEEEEEEcCCCCCccceecccccccc
Q 020039 51 PYQVNEKVLAFF-QSHVYEAKVIQVQYRLKEWTFRVHYLGWNKSWDEWVGVHRLMKD 106 (332)
Q Consensus 51 ~f~vge~vl~~~-~~~~YeAkIl~~~~~~~~~~Y~VHY~GWn~r~DEWV~~~ri~k~ 106 (332)
.|++|+.|++.| .+.||+|+|.++... ..|.|.|.+ . -.|-|+.++|...
T Consensus 6 ~~kvGd~clAkwsDg~wY~A~I~~v~~~---~~y~V~F~D-G--n~E~V~~s~LrPl 56 (81)
T 2ldm_A 6 EFQINEQVLASWSDSRFYPAKVTAVNKD---GTYTVKFYD-G--VVQTVKHIHVKAF 56 (81)
Confidence 499999999988 579999999999643 279999987 2 3488888888665
No 39
>2e5q_A PHD finger protein 19; tudor domain, isoform B, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.13 E-value=0.0031 Score=46.02 Aligned_cols=49 Identities=18% Similarity=0.197 Sum_probs=38.1
Q ss_pred CcCCCCEEEEEeC-CeeeeeEEEEEEeeCCeeEEEEEEcCCCCCccceecccccc
Q 020039 51 PYQVNEKVLAFFQ-SHVYEAKVIQVQYRLKEWTFRVHYLGWNKSWDEWVGVHRLM 104 (332)
Q Consensus 51 ~f~vge~vl~~~~-~~~YeAkIl~~~~~~~~~~Y~VHY~GWn~r~DEWV~~~ri~ 104 (332)
.|.+|+-|||.|. |+.|.++|.+|... ...++|+|..=.+. ||....|.
T Consensus 7 ~f~eGqdVLarWsDGlfYlgtV~kV~~~--~~~ClV~FeD~s~~---wv~~kdi~ 56 (63)
T 2e5q_A 7 GLTEGQYVLCRWTDGLYYLGKIKRVSSS--KQSCLVTFEDNSKY---WVLWKDIQ 56 (63)
T ss_dssp CCCTTCEEEEECTTSCEEEEEECCCCST--TSEEEEEETTSCEE---EEEGGGEE
T ss_pred ceecCCEEEEEecCCCEEEEEEEEEecC--CCEEEEEEccCcee---EEEeeccc
Confidence 6999999999985 79999999988653 35799999877764 55444443
No 40
>2biv_A SCML2 protein, sex COMB on midleg-like protein 2; MBT, malignant brain tumor, transcription factor; 1.7A {Homo sapiens} SCOP: b.34.9.3 b.34.9.3 PDB: 1oi1_A 2vyt_A* 2p0k_A
Probab=95.92 E-value=0.016 Score=53.28 Aligned_cols=54 Identities=22% Similarity=0.178 Sum_probs=44.4
Q ss_pred CCCCcCCCCEEEEEeC---CeeeeeEEEEEEeeCCeeEEEEEEcCCCCCccceeccc--cccc
Q 020039 48 ASCPYQVNEKVLAFFQ---SHVYEAKVIQVQYRLKEWTFRVHYLGWNKSWDEWVGVH--RLMK 105 (332)
Q Consensus 48 ~~~~f~vge~vl~~~~---~~~YeAkIl~~~~~~~~~~Y~VHY~GWn~r~DEWV~~~--ri~k 105 (332)
+...|++|.++.+.+. ..++.|.|+++.. ...+|||.||..++|.|+..+ +|+.
T Consensus 59 ~~~~f~vGmKLEa~D~~~~~~~~vATV~~v~g----~~l~l~~dG~d~~~DfW~~~~S~~I~P 117 (243)
T 2biv_A 59 PVNDFKVGMKLEARDPRNATSVCIATVIGITG----ARLRLRLDGSDNRNDFWRLVDSPDIQP 117 (243)
T ss_dssp CCCCCCTTCEEEEEETTEEEEEEEEEEEEEET----TEEEEEETTSCSSSCEEEETTCTTEEC
T ss_pred CcccccCCCEEEEecCCCCCcEEEEEEEEEeC----CEEEEEECCCCCCCCEeecCCCCcccc
Confidence 3346999999999986 4789999999953 378999999999999999764 5543
No 41
>2r58_A Polycomb protein SCM; MBT repeat, sex COMB on midleg, DI-methyl lysine, regulator, developmental protein, metal-binding, nucleus; HET: MLY; 2.00A {Drosophila melanogaster} PDB: 2r57_A* 2r5a_A* 2r5m_A*
Probab=95.76 E-value=0.022 Score=53.12 Aligned_cols=49 Identities=20% Similarity=0.205 Sum_probs=42.1
Q ss_pred CCCcCCCCEEEEEeCC---eeeeeEEEEEEeeCCeeEEEEEEcCCCCCccceeccc
Q 020039 49 SCPYQVNEKVLAFFQS---HVYEAKVIQVQYRLKEWTFRVHYLGWNKSWDEWVGVH 101 (332)
Q Consensus 49 ~~~f~vge~vl~~~~~---~~YeAkIl~~~~~~~~~~Y~VHY~GWn~r~DEWV~~~ 101 (332)
...|++|.++.+.+.. .++.|.|++|... .++|||.||...+|-|+..+
T Consensus 32 ~~~F~vGMKLEavDp~~~~~icvATV~~v~g~----~l~l~~DG~d~~~DfW~~~~ 83 (265)
T 2r58_A 32 NNDFKIGMKLEALDPRNVTSTCIATVVGVLGS----RLRLRLDGSDSQNDFWRLVD 83 (265)
T ss_dssp CCCCCTTCEEEEEETTEEEEEEEEEEEEEETT----EEEEEETTSCSSCCEEEETT
T ss_pred ccccccCCEeEEecCCCCCCEEEEEEEEEeCC----EEEEEeCCCCCcCCEeEeCC
Confidence 3469999999999863 6899999999743 89999999999999999764
No 42
>3fdr_A Tudor and KH domain-containing protein; TDRD2, structural genomics, structural genomics consortium, SGC, alternative splicing, RNA-binding; 1.75A {Homo sapiens} SCOP: b.34.9.1
Probab=95.62 E-value=0.035 Score=43.13 Aligned_cols=53 Identities=13% Similarity=0.149 Sum_probs=43.5
Q ss_pred CcCCCCEEEEEe--CCeeeeeEEEEEEeeCCeeEEEEEEcCCCCCccceeccccccccCh
Q 020039 51 PYQVNEKVLAFF--QSHVYEAKVIQVQYRLKEWTFRVHYLGWNKSWDEWVGVHRLMKDTE 108 (332)
Q Consensus 51 ~f~vge~vl~~~--~~~~YeAkIl~~~~~~~~~~Y~VHY~GWn~r~DEWV~~~ri~k~t~ 108 (332)
...+|+.|++.+ .+.||.|+|+++.. ...+.|+|.+|... |.|+.++|....+
T Consensus 27 ~~~~G~~c~a~~~~d~~wyRA~I~~~~~---~~~~~V~fvDyGn~--e~v~~~~lr~l~~ 81 (94)
T 3fdr_A 27 TVHVGDIVAAPLPTNGSWYRARVLGTLE---NGNLDLYFVDFGDN--GDCPLKDLRALRS 81 (94)
T ss_dssp CCCTTCEEEEEETTTTEEEEEEEEEECT---TSCEEEEETTTCCE--EEECGGGCEECCG
T ss_pred CCCCCCEEEEEECCCCeEEEEEEEEECC---CCeEEEEEEcCCCe--EEEEHHHhhhcCH
Confidence 578999999987 68999999999953 23688999999774 8899888877643
No 43
>1oz2_A Lethal(3)malignant brain tumor-like protein; propeller, transcription repressor, three malignant brain TU repeats, transcription; HET: MES; 1.55A {Homo sapiens} SCOP: b.34.9.3 b.34.9.3 b.34.9.3 PDB: 1oyx_A* 1oz3_A* 3oq5_A* 2rhi_A* 2rhx_A* 2rjd_A 2rjc_A 2rje_A* 2rjf_A* 3uwn_A* 2pqw_A* 3p8h_A* 2rhu_A* 2rhy_A* 2rhz_A* 2ri3_A* 2ri2_A* 2ri5_A*
Probab=95.53 E-value=0.024 Score=54.43 Aligned_cols=51 Identities=29% Similarity=0.436 Sum_probs=43.4
Q ss_pred CCcCCCCEEEEEeC---CeeeeeEEEEEEeeCCeeEEEEEEcCCCCCccceeccc--ccc
Q 020039 50 CPYQVNEKVLAFFQ---SHVYEAKVIQVQYRLKEWTFRVHYLGWNKSWDEWVGVH--RLM 104 (332)
Q Consensus 50 ~~f~vge~vl~~~~---~~~YeAkIl~~~~~~~~~~Y~VHY~GWn~r~DEWV~~~--ri~ 104 (332)
..|++|.++.+.+. .+++.|.|.+|... .++|||.||...+|-|+..+ +|+
T Consensus 147 ~~F~vGmKLEavD~~np~~icvATV~~v~g~----r~~v~~Dg~~~~~D~w~~~~S~~I~ 202 (331)
T 1oz2_A 147 LGFQVGMKLEAVDRMNPSLVCVASVTDVVDS----RFLVHFDNWDDTYDYWCDPSSPYIH 202 (331)
T ss_dssp TTCCTTCEEEEECTTSTTCEEEEEEEEEETT----EEEEEETTSCGGGCEEECTTCTTEE
T ss_pred cccccccEEEeccCCCCCcEEEEEEEEeeCC----EEEEEeCCCCCccCEEEecCCCCcc
Confidence 36999999999984 58999999998743 68999999999999999764 554
No 44
>1oz2_A Lethal(3)malignant brain tumor-like protein; propeller, transcription repressor, three malignant brain TU repeats, transcription; HET: MES; 1.55A {Homo sapiens} SCOP: b.34.9.3 b.34.9.3 b.34.9.3 PDB: 1oyx_A* 1oz3_A* 3oq5_A* 2rhi_A* 2rhx_A* 2rjd_A 2rjc_A 2rje_A* 2rjf_A* 3uwn_A* 2pqw_A* 3p8h_A* 2rhu_A* 2rhy_A* 2rhz_A* 2ri3_A* 2ri2_A* 2ri5_A*
Probab=95.41 E-value=0.025 Score=54.26 Aligned_cols=52 Identities=23% Similarity=0.472 Sum_probs=43.9
Q ss_pred CCcCCCCEEEEEeC---CeeeeeEEEEEEeeCCeeEEEEEEcCCCCCccceeccc--cccc
Q 020039 50 CPYQVNEKVLAFFQ---SHVYEAKVIQVQYRLKEWTFRVHYLGWNKSWDEWVGVH--RLMK 105 (332)
Q Consensus 50 ~~f~vge~vl~~~~---~~~YeAkIl~~~~~~~~~~Y~VHY~GWn~r~DEWV~~~--ri~k 105 (332)
..|++|.++.+.+. .+++.|.|.+|.. ....|||.||...+|.|+..+ .|+.
T Consensus 251 ~~F~~gmKLEavD~~~p~~ic~AtV~~v~~----~~l~v~fDgw~~~~d~w~~~dS~~I~P 307 (331)
T 1oz2_A 251 HSFLVNMKLEAVDRRNPALIRVASVEDVED----HRIKIHFDGWSHGYDFWIDADHPDIHP 307 (331)
T ss_dssp CCCCTTCEEEEECSSSTTCEEEEEEEEECS----SEEEEEETTBCGGGCEEEETTCTTEEC
T ss_pred cccccCceeEeecccCCCcEEeeEEEEEcC----CEEEEEeCCCCCcCCEEEECCCCCccc
Confidence 46999999999985 4799999999963 369999999999999999875 5554
No 45
>3h6z_A Polycomb protein SFMBT; MBT, MBR repeat, aromatic CAGE, chromatin regulator, DNA-BIN metal-binding, nucleus, repressor, transcription; HET: MLZ SUC; 2.80A {Drosophila melanogaster}
Probab=95.33 E-value=0.026 Score=56.27 Aligned_cols=54 Identities=20% Similarity=0.397 Sum_probs=44.6
Q ss_pred CCCCcCCCCEEEEEeC---CeeeeeEEEEEEeeCCeeEEEEEEcCCCCCccceeccc--cccc
Q 020039 48 ASCPYQVNEKVLAFFQ---SHVYEAKVIQVQYRLKEWTFRVHYLGWNKSWDEWVGVH--RLMK 105 (332)
Q Consensus 48 ~~~~f~vge~vl~~~~---~~~YeAkIl~~~~~~~~~~Y~VHY~GWn~r~DEWV~~~--ri~k 105 (332)
+...|++|-++.+... .++..|.|.+|.. ..-.|||.||...+|.|+..+ .|+.
T Consensus 373 ~~~~F~~gmkLEAvD~~np~~icvATV~~v~~----~~~~i~fDgw~~~~d~w~~~~S~dI~P 431 (447)
T 3h6z_A 373 PDHGFEVGMSLECADLMDPRLVCVATVARVVG----RLLKVHFDGWTDEYDQWLDCESADIYP 431 (447)
T ss_dssp CCCCCCTTCEEEEECTTSTTCEEEEEEEEEET----TEEEEECTTSCGGGCEEEETTCTTEEC
T ss_pred CCCccccCCEEEeecCCCCCcEEEEEEeEecC----CEEEEEeCCCCCcCCEEEecCCCCccc
Confidence 3346999999999874 5899999999984 378899999999999999764 4443
No 46
>3fdt_A Chromobox protein homolog 5; chromobox homolog5, CBX5, structural GENO structural genomics consortium, SGC, centromere, nucleus, phosphoprotein; HET: M3L; 2.00A {Homo sapiens}
Probab=95.23 E-value=0.032 Score=40.09 Aligned_cols=37 Identities=16% Similarity=0.391 Sum_probs=33.3
Q ss_pred eee-EEEEEEeeCCeeEEEEEEcCCCCCccceeccccc
Q 020039 67 YEA-KVIQVQYRLKEWTFRVHYLGWNKSWDEWVGVHRL 103 (332)
Q Consensus 67 YeA-kIl~~~~~~~~~~Y~VHY~GWn~r~DEWV~~~ri 103 (332)
|+. +|++.+..+|...|+|+..||....+-|.|++.|
T Consensus 4 y~VE~Il~~r~~~g~~~YlVkWkGy~~~~~TWEp~~nl 41 (59)
T 3fdt_A 4 YVVEKVLDRRVVKGQVEYLLKWKGFSEEHNTWEPEKNL 41 (59)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTSCGGGCEEEEGGGE
T ss_pred EEEEEEEEEEEeCCeEEEEEEEeCCCcccCCccchhHC
Confidence 444 7888888889999999999999999999999988
No 47
>3i91_A Chromobox protein homolog 8; chromobox homolog 8, CBX8, structural genomics structural genomics consortium, SGC, chromatin regulator, N phosphoprotein, repressor; HET: M3L; 1.55A {Homo sapiens} SCOP: b.34.13.2 PDB: 3gv6_A* 3i90_A*
Probab=95.13 E-value=0.029 Score=39.51 Aligned_cols=38 Identities=16% Similarity=0.567 Sum_probs=33.8
Q ss_pred eee-EEEEEEeeCCeeEEEEEEcCCCCCccceecccccc
Q 020039 67 YEA-KVIQVQYRLKEWTFRVHYLGWNKSWDEWVGVHRLM 104 (332)
Q Consensus 67 YeA-kIl~~~~~~~~~~Y~VHY~GWn~r~DEWV~~~ri~ 104 (332)
|++ +|++.+..+|...|+|+..||....+-|.|++.|.
T Consensus 4 y~VE~Il~~r~~~g~~~YlVkWkGy~~~~~TWEp~~nl~ 42 (54)
T 3i91_A 4 FAAEALLKRRIRKGRMEYLVKWKGWSQKYSTWEPEENIL 42 (54)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTSCGGGCEEEEGGGBC
T ss_pred EEEEEEEEEEEeCCcEEEEEEEeCCCcccCcccchhHCC
Confidence 444 78888888899999999999999999999999886
No 48
>1pfb_A Polycomb protein; chromatin, histone methylation, polycomb, chromodomain, peptide binding protein; HET: M3L; 1.40A {Drosophila melanogaster} SCOP: b.34.13.2
Probab=95.09 E-value=0.03 Score=39.60 Aligned_cols=35 Identities=26% Similarity=0.640 Sum_probs=32.2
Q ss_pred EEEEEEeeCCeeEEEEEEcCCCCCccceecccccc
Q 020039 70 KVIQVQYRLKEWTFRVHYLGWNKSWDEWVGVHRLM 104 (332)
Q Consensus 70 kIl~~~~~~~~~~Y~VHY~GWn~r~DEWV~~~ri~ 104 (332)
+|++.+..+|...|+|.+.||....+-|.|++.|.
T Consensus 8 ~Il~~r~~~g~~~YlVKWkgy~~~~~TWEp~~~l~ 42 (55)
T 1pfb_A 8 KIIQKRVKKGVVEYRVKWKGWNQRYNTWEPEVNIL 42 (55)
T ss_dssp EEEEEEEETTEEEEEEEETTSCGGGCEEEEGGGCC
T ss_pred EEEEEEEeCCeEEEEEEEcCCCCccCcEeEHHHCC
Confidence 78888888899999999999999999999998875
No 49
>3h91_A Chromobox protein homolog 2; human chromobox homolog 2, CBX2, structural genomics, structural genomics consortium, SGC, chromatin regulator, D binding, nucleus; HET: M3L; 1.50A {Homo sapiens} SCOP: b.34.13.2 PDB: 2k28_A 3i8z_A
Probab=95.04 E-value=0.033 Score=39.25 Aligned_cols=38 Identities=16% Similarity=0.526 Sum_probs=33.9
Q ss_pred eee-EEEEEEeeCCeeEEEEEEcCCCCCccceecccccc
Q 020039 67 YEA-KVIQVQYRLKEWTFRVHYLGWNKSWDEWVGVHRLM 104 (332)
Q Consensus 67 YeA-kIl~~~~~~~~~~Y~VHY~GWn~r~DEWV~~~ri~ 104 (332)
|++ +|++.+..+|...|+|+..||....+-|.|++.|.
T Consensus 4 y~VE~Il~~r~~~g~~~YlVkWkGy~~~~~TWEp~~nl~ 42 (54)
T 3h91_A 4 FAAECILSKRLRKGKLEYLVKWRGWSSKHNSWEPEENIL 42 (54)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTSCGGGCEEEEGGGBC
T ss_pred eEEEEEEEEEEeCCcEEEEEEEeCCCCcCCCeecHhHCC
Confidence 444 78888888899999999999999999999999886
No 50
>3lwe_A M-phase phosphoprotein 8; MPP8, structural genomics, structural genomics consortium, S repeat, nucleus, cell cycle; 2.05A {Homo sapiens} SCOP: b.34.13.0 PDB: 3r93_A* 3svm_A* 3qo2_A*
Probab=95.04 E-value=0.022 Score=41.41 Aligned_cols=39 Identities=21% Similarity=0.427 Sum_probs=33.7
Q ss_pred eeee-EEEEEEeeCCeeEEEEEEcCCCCCccceecccccc
Q 020039 66 VYEA-KVIQVQYRLKEWTFRVHYLGWNKSWDEWVGVHRLM 104 (332)
Q Consensus 66 ~YeA-kIl~~~~~~~~~~Y~VHY~GWn~r~DEWV~~~ri~ 104 (332)
.|+. +|++.+..+|...|+|+..||....+-|.|++.|.
T Consensus 4 ~y~VE~Il~~r~~~g~~~YlVkWkGy~~~~~TWEp~~nl~ 43 (62)
T 3lwe_A 4 VFEVEKILDMKTEGGKVLYKVRWKGYTSDDDTWEPEIHLE 43 (62)
T ss_dssp SCCEEEEEEEEEETTEEEEEEEETTSCGGGCEEEEHHHHT
T ss_pred eEEEEEEEEEEEcCCeEEEEEEEeCCCCcCCCeeeHhHhh
Confidence 3555 78888888899999999999999999999998873
No 51
>2l89_A PWWP domain-containing protein 1; histone binding, protein binding; NMR {Schizosaccharomyces pombe}
Probab=94.94 E-value=0.077 Score=42.69 Aligned_cols=59 Identities=8% Similarity=0.144 Sum_probs=46.9
Q ss_pred CcCCCCEEEEEeCC-eeeeeEEEEEEee--------CCeeEEEEEEcCCCCCccceeccccccccChHhh
Q 020039 51 PYQVNEKVLAFFQS-HVYEAKVIQVQYR--------LKEWTFRVHYLGWNKSWDEWVGVHRLMKDTEANR 111 (332)
Q Consensus 51 ~f~vge~vl~~~~~-~~YeAkIl~~~~~--------~~~~~Y~VHY~GWn~r~DEWV~~~ri~k~t~en~ 111 (332)
.|.+|+.|++.-+| -||+|+|+.-... .+...|.|.|-|= ..| -||+..+|..++++..
T Consensus 5 ~~~~GdlVwaK~~gyP~WPa~V~~~~~~p~~v~~~~~~~~~~~V~FFg~-~~~-aWv~~~~l~p~~~~~~ 72 (108)
T 2l89_A 5 RLNFGDRILVKAPGYPWWPALLLRRKETKDSLNTNSSFNVLYKVLFFPD-FNF-AWVKRNSVKPLLDSEI 72 (108)
T ss_dssp CCCTTEEEEEECSSSCEEEEEEEEEEEEESSSCSSSCEEEEEEEEETTT-TEE-EEECGGGEEECCHHHH
T ss_pred cccCCCEEEEEeCCcCCCceEecCcccCcHHHhhccCCCCeEEEEECCC-CCE-EEEchhhceeCCHHHH
Confidence 59999999998877 6999999986532 2356999999993 223 7999999999987654
No 52
>1ri0_A Hepatoma-derived growth factor; HDGF, HATH domain, PWWP domain, heparin-binding, hormone/growth factor complex; NMR {Homo sapiens} SCOP: b.34.9.2 PDB: 2b8a_A 2nlu_A
Probab=94.87 E-value=0.03 Score=45.35 Aligned_cols=59 Identities=15% Similarity=0.286 Sum_probs=47.0
Q ss_pred CCCCcCCCCEEEEEeCC-eeeeeEEEEEEee---CCeeEEEEEEcCCCCCccceeccccccccCh
Q 020039 48 ASCPYQVNEKVLAFFQS-HVYEAKVIQVQYR---LKEWTFRVHYLGWNKSWDEWVGVHRLMKDTE 108 (332)
Q Consensus 48 ~~~~f~vge~vl~~~~~-~~YeAkIl~~~~~---~~~~~Y~VHY~GWn~r~DEWV~~~ri~k~t~ 108 (332)
.+..|.+|+.|.+.-+| -|++|+|+.+... .....|.|.|-|-+.+. ||+.++|+.+.+
T Consensus 16 ~~~~~~~GdlVwaK~kGyP~WPa~V~~~p~~~~k~~~~~~~V~FFGt~~~a--wv~~~~l~pf~~ 78 (110)
T 1ri0_A 16 RQKEYKCGDLVFAKMKGYPHWPARIDEMPEAAVKSTANKYQVFFFGTHETA--FLGPKDLFPYEE 78 (110)
T ss_dssp CSSSCCTTCEEEEEETTEEEEEEEEECCCSSSSCCCSSCEEEEETTTTEEE--EECSTTEECHHH
T ss_pred ccCCCCCCCEEEEEeCCCCCCCEEEecccHhhcCCCCCEEEEEEecCCCEE--EECHHHccchhh
Confidence 33369999999998877 6899999875331 23468999999987665 999999999964
No 53
>1pdq_A Polycomb protein; methyllysine, chromodomain, polycomb, lysine methylation, trimethyllysine, cation-PI, chromo, structural protein; HET: M3L; 1.76A {Drosophila melanogaster} SCOP: b.34.13.2
Probab=94.83 E-value=0.053 Score=40.78 Aligned_cols=41 Identities=29% Similarity=0.646 Sum_probs=35.5
Q ss_pred Ceeeee-EEEEEEeeCCeeEEEEEEcCCCCCccceecccccc
Q 020039 64 SHVYEA-KVIQVQYRLKEWTFRVHYLGWNKSWDEWVGVHRLM 104 (332)
Q Consensus 64 ~~~YeA-kIl~~~~~~~~~~Y~VHY~GWn~r~DEWV~~~ri~ 104 (332)
...|+. +|++.+..+|...|+|.+.||....+-|.|++.|.
T Consensus 18 ~~eyeVEkIld~r~~~g~~~YlVKWkGy~~~~nTWEP~enL~ 59 (72)
T 1pdq_A 18 DLVYAAEKIIQKRVKKGVVEYRVKWKGWNQRYNTWEPEVNIL 59 (72)
T ss_dssp CEEEEEEEEEEEEEETTEEEEEEEETTSCGGGCEEEEGGGCC
T ss_pred CceEEEEEEEEEEEeCCcEEEEEEECCCCCccCeecchHHCC
Confidence 456666 78888888899999999999999999999998874
No 54
>2k1b_A Chromobox protein homolog 7; alpha/beta protein, chromatin regulator, nucleus, repressor, transcription, transcription regulation; NMR {Homo sapiens} PDB: 2l12_A* 2l1b_A*
Probab=94.82 E-value=0.034 Score=41.97 Aligned_cols=41 Identities=15% Similarity=0.482 Sum_probs=34.5
Q ss_pred Ceeeee-EEEEEEeeCCeeEEEEEEcCCCCCccceecccccc
Q 020039 64 SHVYEA-KVIQVQYRLKEWTFRVHYLGWNKSWDEWVGVHRLM 104 (332)
Q Consensus 64 ~~~YeA-kIl~~~~~~~~~~Y~VHY~GWn~r~DEWV~~~ri~ 104 (332)
...|+. +|++.+..+|...|+|.+.||....+-|.|++.|.
T Consensus 19 ~~eyeVEkIld~r~~~g~~~YlVKWkGy~~~~~TWEp~enL~ 60 (73)
T 2k1b_A 19 EQVFAVESIRKKRVRKGKVEYLVKWKGWPPKYSTWEPEEHIL 60 (73)
T ss_dssp CCCCCCSEEEEEEEETTEEEEEEECTTCCGGGCCEEETTSCS
T ss_pred CceEEEEEEEEEEEcCCcEEEEEEECCCCcccCeecchHHCC
Confidence 344555 77887778889999999999999999999998875
No 55
>3f70_A Lethal(3)malignant brain tumor-like 2 protein; MBT, chromatin regulator, metal-binding, nucleus, transcript transcription regulation, zinc-finger; HET: MLZ; 2.10A {Homo sapiens} PDB: 3dbb_A* 3cey_A
Probab=94.66 E-value=0.058 Score=53.92 Aligned_cols=51 Identities=24% Similarity=0.470 Sum_probs=43.0
Q ss_pred CcCCCCEEEEEeC---CeeeeeEEEEEEeeCCeeEEEEEEcCCCCCccceeccc--cccc
Q 020039 51 PYQVNEKVLAFFQ---SHVYEAKVIQVQYRLKEWTFRVHYLGWNKSWDEWVGVH--RLMK 105 (332)
Q Consensus 51 ~f~vge~vl~~~~---~~~YeAkIl~~~~~~~~~~Y~VHY~GWn~r~DEWV~~~--ri~k 105 (332)
.|++|-++.+... .++..|.|.+|.. ..-.|||.||...+|+|+..+ .|+.
T Consensus 366 ~F~~GMKLEAvD~~np~~icvATV~~v~~----~~l~i~fDgw~~~~d~w~~~~S~~I~P 421 (456)
T 3f70_A 366 GFKVGMKLEAVDLMEPRLICVATVKRVVH----RLLSIHFDGWDSEYDQWVDCESPDIYP 421 (456)
T ss_dssp CCCTTCEEEEECTTSTTCEEEEEEEEEET----TEEEEEETTSCGGGCEEEETTCTTEEC
T ss_pred ccccCCEEEeecCCCCCcEEEEEEEEecC----CEEEEEeCCCCCCCCeEeecCCCCccc
Confidence 5999999999985 4799999999873 377999999999999999764 5543
No 56
>3f2u_A Chromobox protein homolog 1; human chromobox homolog 1, CBX1, structural genomics, struct genomics consortium, SGC, centromere, nucleus; 1.80A {Homo sapiens} PDB: 3tzd_A* 2l11_A* 3dm1_A*
Probab=94.65 E-value=0.046 Score=38.66 Aligned_cols=34 Identities=15% Similarity=0.310 Sum_probs=31.6
Q ss_pred EEEEEEeeCCeeEEEEEEcCCCCCccceeccccc
Q 020039 70 KVIQVQYRLKEWTFRVHYLGWNKSWDEWVGVHRL 103 (332)
Q Consensus 70 kIl~~~~~~~~~~Y~VHY~GWn~r~DEWV~~~ri 103 (332)
+|++.+..+|...|+|+..||....+-|.|++.|
T Consensus 7 ~Il~~r~~~g~~~YlVkWkGy~~~~~TWEp~~nl 40 (55)
T 3f2u_A 7 KVLDRRVVKGKVEYLLKWKGFSDEDNTWEPEENL 40 (55)
T ss_dssp EEEEEEEETTEEEEEEEETTSCGGGCEEEEGGGC
T ss_pred EEEEEEEeCCeEEEEEEEEeCCCccCCeeEHHHC
Confidence 7888888889999999999999999999999988
No 57
>3ut1_A Lethal(3)malignant brain tumor-like protein 3; chromatin modification, transcription repression, MBT repeat structural genomics; HET: EPE; 2.05A {Homo sapiens} PDB: 4fl6_A* 1wjs_A
Probab=94.65 E-value=0.057 Score=51.63 Aligned_cols=52 Identities=21% Similarity=0.423 Sum_probs=43.6
Q ss_pred CCcCCCCEEEEEeC---CeeeeeEEEEEEeeCCeeEEEEEEcCCCCCccceeccc--cccc
Q 020039 50 CPYQVNEKVLAFFQ---SHVYEAKVIQVQYRLKEWTFRVHYLGWNKSWDEWVGVH--RLMK 105 (332)
Q Consensus 50 ~~f~vge~vl~~~~---~~~YeAkIl~~~~~~~~~~Y~VHY~GWn~r~DEWV~~~--ri~k 105 (332)
..|++|-++.+... .++..|.|.+|.. ..-.|||.||...+|.|+..+ .|+.
T Consensus 246 ~~F~~gmkLEAvD~~~p~licvATV~~v~g----~~l~v~fDgw~~~~d~w~~~~S~dI~P 302 (324)
T 3ut1_A 246 HGFQKKMKLEVVDKRNPMFIRVATVADTDD----HRVKVHFDGWNNCYDYWIDADSPDIHP 302 (324)
T ss_dssp CCCCTTCEEEEECSSSTTCEEEEEEEEECS----SEEEEEETTSCGGGCEEEETTCTTEEC
T ss_pred ccCCCCCeeeccCCCCCCceeEEEEEEecC----CEEEEEeCCCCCCCCEEEeCCCCCeec
Confidence 46999999999974 4789999999953 478999999999999999874 5543
No 58
>1wjr_A KIAA1617 protein; MBT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.9.3
Probab=94.49 E-value=0.031 Score=46.54 Aligned_cols=51 Identities=22% Similarity=0.264 Sum_probs=42.7
Q ss_pred CcCCCCEEEEEeC---CeeeeeEEEEEEeeCCeeEEEEEEcCCCC--Cccceeccc--cccc
Q 020039 51 PYQVNEKVLAFFQ---SHVYEAKVIQVQYRLKEWTFRVHYLGWNK--SWDEWVGVH--RLMK 105 (332)
Q Consensus 51 ~f~vge~vl~~~~---~~~YeAkIl~~~~~~~~~~Y~VHY~GWn~--r~DEWV~~~--ri~k 105 (332)
.|++|.++.+.+. .+++-|.|+++.. ..-+|||.||.. ++|-|+..+ +|+.
T Consensus 11 ~f~~GmKLEa~D~~~p~~~~vAtV~~v~g----~rl~l~~dG~~~~~~~D~W~~~~s~~I~P 68 (127)
T 1wjr_A 11 LITVGSLIELQDSQNPFQYWIVSVIENVG----GRLRLRYVGLEDTESYDQWLFYLDYRLRP 68 (127)
T ss_dssp HCCTTCEEEEECSSCSSCEEEEECCCEET----TEEEECBTTCSSCCSSCEEEETTCSSCBC
T ss_pred hccCCCEeEEecCCCCCcEEEEEEeeeeC----CEEEEEecCCCCCCCCCEeEeCCCCCccc
Confidence 5999999999985 4788999998874 489999999999 899999764 5554
No 59
>3mts_A Histone-lysine N-methyltransferase SUV39H1; histone methyltransferase, histone-lysine N-methyltransferas SUV39H1, histone H3, TRI-methylation; 2.20A {Homo sapiens}
Probab=94.47 E-value=0.045 Score=40.11 Aligned_cols=35 Identities=14% Similarity=0.193 Sum_probs=31.5
Q ss_pred EEEEEEeeCCeeEEEEEEcCCCCCccceecccccc
Q 020039 70 KVIQVQYRLKEWTFRVHYLGWNKSWDEWVGVHRLM 104 (332)
Q Consensus 70 kIl~~~~~~~~~~Y~VHY~GWn~r~DEWV~~~ri~ 104 (332)
+|++.+..+|...|+|++.||....+-|.|++.|.
T Consensus 5 ~Il~~r~~~g~~~YlVKWkGy~~~~~TWEp~~nl~ 39 (64)
T 3mts_A 5 YLCDYKKIREQEYYLVKWRGYPDSESTWEPRQNLK 39 (64)
T ss_dssp EEEEEEECSSCEEEEEEETTSCGGGCEEEEGGGCC
T ss_pred EEEEEEEeCCeEEEEEEEecCCCcCCcEeEHHHCC
Confidence 67777777889999999999999999999999884
No 60
>2d9u_A Chromobox protein homolog 2 (isoform 2); chromobox homolog 2, chromo domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.45 E-value=0.059 Score=40.52 Aligned_cols=40 Identities=18% Similarity=0.532 Sum_probs=33.8
Q ss_pred eeee-EEEEEEeeCCeeEEEEEEcCCCCCccceeccccccc
Q 020039 66 VYEA-KVIQVQYRLKEWTFRVHYLGWNKSWDEWVGVHRLMK 105 (332)
Q Consensus 66 ~YeA-kIl~~~~~~~~~~Y~VHY~GWn~r~DEWV~~~ri~k 105 (332)
.|+. +|++.+..++...|+|.+.||....+-|.|++.|..
T Consensus 10 ey~VE~Il~~r~~~g~~~YlVKWkGy~~~~~TWEp~~nl~~ 50 (74)
T 2d9u_A 10 VFAAECILSKRLRKGKLEYLVKWRGWSSKHNSWEPEENILD 50 (74)
T ss_dssp CCCEEEEEEEEEETTEEEEEEEETTSCTTTCEEEEGGGCCC
T ss_pred cEEEEEEEEEEEeCCcEEEEEEECCCCCccCccccHHHCCC
Confidence 3444 677777778899999999999999999999988763
No 61
>3g7l_A Chromo domain-containing protein 1; chromodomain, protein-peptide complex, silencing, cell cycle, chromosome partition, DNA-binding, nucleus; HET: M3L; 2.20A {Schizosaccharomyces pombe}
Probab=94.44 E-value=0.059 Score=39.00 Aligned_cols=40 Identities=15% Similarity=0.381 Sum_probs=33.8
Q ss_pred eeeee-EEEEEEeeCCee-EEEEEEcCCCCCccceecccccc
Q 020039 65 HVYEA-KVIQVQYRLKEW-TFRVHYLGWNKSWDEWVGVHRLM 104 (332)
Q Consensus 65 ~~YeA-kIl~~~~~~~~~-~Y~VHY~GWn~r~DEWV~~~ri~ 104 (332)
..|++ +|++.+..+|.. .|+|+..||....+-|.|+..|.
T Consensus 6 ~ey~VE~Il~~r~~~g~~~~YlVkWkGy~~~~~TWEp~~nl~ 47 (61)
T 3g7l_A 6 DVYEVEDILADRVNKNGINEYYIKWAGYDWYDNTWEPEQNLF 47 (61)
T ss_dssp CEEEEEEEEEEEECTTSCEEEEEEETTSCGGGCEEEEGGGGT
T ss_pred cEEEEEEEEEEEEECCCEEEEEEEEeCCCCcCCceeeHhHCC
Confidence 34555 788888877777 99999999999999999998883
No 62
>2kvm_A Chromobox protein homolog 7; histone modification, lysine methylation, chromobox, polycom chromatin-binding; HET: MLY; NMR {Mus musculus}
Probab=94.41 E-value=0.052 Score=40.79 Aligned_cols=39 Identities=15% Similarity=0.495 Sum_probs=33.1
Q ss_pred eeee-EEEEEEeeCCeeEEEEEEcCCCCCccceecccccc
Q 020039 66 VYEA-KVIQVQYRLKEWTFRVHYLGWNKSWDEWVGVHRLM 104 (332)
Q Consensus 66 ~YeA-kIl~~~~~~~~~~Y~VHY~GWn~r~DEWV~~~ri~ 104 (332)
.|+. +|++.+..++...|+|.+.||....+-|.|++.|.
T Consensus 13 ~y~VE~Il~~r~~~g~~~YlVKWkGy~~~~~TWEp~~~L~ 52 (74)
T 2kvm_A 13 VFAVESIRKKRVRKGKVEYLVKWKGWPPKYSTWEPEEHIL 52 (74)
T ss_dssp CCCEEEEEEEEEETTEEEEEEEETTSCGGGCEEEETTTCS
T ss_pred cEEEEEEEEEEEeCCcEEEEEEEcCCCCccCeEeeHHHCC
Confidence 3444 67777777889999999999999999999999876
No 63
>2dnv_A Chromobox protein homolog 8; chromo domain, histone H3 tail, choromatin organization modifier, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.34.13.2
Probab=94.20 E-value=0.037 Score=40.42 Aligned_cols=36 Identities=14% Similarity=0.534 Sum_probs=30.7
Q ss_pred EEEEEEeeCCeeEEEEEEcCCCCCccceeccccccc
Q 020039 70 KVIQVQYRLKEWTFRVHYLGWNKSWDEWVGVHRLMK 105 (332)
Q Consensus 70 kIl~~~~~~~~~~Y~VHY~GWn~r~DEWV~~~ri~k 105 (332)
+|++.+..++...|+|++.||....+-|.|++.|..
T Consensus 15 ~Il~~r~~~g~~~YlVKWkGy~~~~~TWEp~~~l~~ 50 (64)
T 2dnv_A 15 ALLKRRIRKGRMEYLVKWKGWSQKYSTWEPEENILD 50 (64)
T ss_dssp CEEEEEESSSSEEEEECCSSCCCSSCCEEETTTCCC
T ss_pred EEEEEEEeCCcEEEEEEECCCCcccCCccCHhHCCC
Confidence 566666667889999999999999999999988763
No 64
>4hae_A CDY-like 2, chromodomain Y-like protein 2; protein binding, structural genomics consortiu; 2.00A {Homo sapiens}
Probab=94.08 E-value=0.084 Score=40.47 Aligned_cols=41 Identities=20% Similarity=0.652 Sum_probs=34.1
Q ss_pred Ceeeee-EEEEEEe-eCCeeEEEEEEcCCCCCccceecccccc
Q 020039 64 SHVYEA-KVIQVQY-RLKEWTFRVHYLGWNKSWDEWVGVHRLM 104 (332)
Q Consensus 64 ~~~YeA-kIl~~~~-~~~~~~Y~VHY~GWn~r~DEWV~~~ri~ 104 (332)
+..|+. +|++.+. .+|...|+|.+.||....|-|.|++.|.
T Consensus 21 ~e~yeVE~Ild~R~~~~g~~~YlVKWkGy~~~~~TWEp~~nl~ 63 (81)
T 4hae_A 21 GDLYEVERIVDKRKNKKGKWEYLIRWKGYGSTEDTWEPEHHLL 63 (81)
T ss_dssp SCEEEEEEEEEEEECTTSCEEEEEEETTCCGGGCEEEEGGGEE
T ss_pred CCEEEEEEEEEeEECCCCeEEEEEEECCCCCCCCeEEeHHHhh
Confidence 567877 7887776 4577899999999999999999998774
No 65
>1q3l_A Heterochromatin protein 1; chromodomain, HP1, chromatin, methyllysine, monomethyllysine, structural protein; HET: MLZ; 1.64A {Drosophila melanogaster} SCOP: b.34.13.2 PDB: 1kne_A* 1kna_A*
Probab=94.06 E-value=0.064 Score=39.95 Aligned_cols=40 Identities=18% Similarity=0.379 Sum_probs=33.8
Q ss_pred Ceeeee-EEEEEEeeCCeeEEEEEEcCCCCCccceeccccc
Q 020039 64 SHVYEA-KVIQVQYRLKEWTFRVHYLGWNKSWDEWVGVHRL 103 (332)
Q Consensus 64 ~~~YeA-kIl~~~~~~~~~~Y~VHY~GWn~r~DEWV~~~ri 103 (332)
...|+. +|++.+..+|...|+|.+.||....+-|.|++.|
T Consensus 14 ~~ey~VEkIld~R~~~g~~eYlVKWkGy~~~~~TWEp~enL 54 (69)
T 1q3l_A 14 EEEYAVEKIIDRRVRKGMVEYYLKWKGYPETENTWEPENNL 54 (69)
T ss_dssp --CEEEEEEEEEEEETTEEEEEEEETTSCGGGCEEEEGGGE
T ss_pred CCcEEEEEEEEEEEECCeEEEEEEEcCCCcccCCccchHHC
Confidence 345555 7888888889999999999999999999999887
No 66
>1ap0_A Modifier protein 1; chromatin-binding, protein interaction motif, alpha+beta; NMR {Mus musculus} SCOP: b.34.13.2 PDB: 1guw_A*
Probab=93.84 E-value=0.08 Score=39.66 Aligned_cols=38 Identities=16% Similarity=0.314 Sum_probs=33.0
Q ss_pred eeee-EEEEEEeeCCeeEEEEEEcCCCCCccceeccccc
Q 020039 66 VYEA-KVIQVQYRLKEWTFRVHYLGWNKSWDEWVGVHRL 103 (332)
Q Consensus 66 ~YeA-kIl~~~~~~~~~~Y~VHY~GWn~r~DEWV~~~ri 103 (332)
.|+. +|++.+..+|...|+|.+.||....+-|.|++.|
T Consensus 13 ey~VE~Il~~r~~~g~~~YlVKWkGy~~~~~TWEp~~nL 51 (73)
T 1ap0_A 13 EYVVEKVLDRRVVKGKVEYLLKWKGFSDEDNTWEPEENL 51 (73)
T ss_dssp CCEEEEEEEEEECSSSEEEEEEEESSSSCCCEEEETTTC
T ss_pred eEEEEEEEEEEEeCCeEEEEEEECCCCCccCcEeeHHHC
Confidence 3444 7888888888999999999999999999999887
No 67
>2diq_A Tudor and KH domain-containing protein; tudor domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=93.69 E-value=0.061 Score=42.99 Aligned_cols=53 Identities=13% Similarity=0.145 Sum_probs=44.2
Q ss_pred CcCCCCEEEEEe--CCeeeeeEEEEEEeeCCeeEEEEEEcCCCCCccceeccccccccCh
Q 020039 51 PYQVNEKVLAFF--QSHVYEAKVIQVQYRLKEWTFRVHYLGWNKSWDEWVGVHRLMKDTE 108 (332)
Q Consensus 51 ~f~vge~vl~~~--~~~~YeAkIl~~~~~~~~~~Y~VHY~GWn~r~DEWV~~~ri~k~t~ 108 (332)
.+.+|+.|++.+ .+.||-|+|+++... ..+.|+|.+|... |.|+.++|....+
T Consensus 32 ~~~~G~~c~a~~~~d~~wyRA~V~~~~~~---~~~~V~fvDyGn~--e~v~~~~Lr~l~~ 86 (110)
T 2diq_A 32 TVHVGDIVAAPLPTNGSWYRARVLGTLEN---GNLDLYFVDFGDN--GDCPLKDLRALRS 86 (110)
T ss_dssp CCCTTCEEEECCTTTCSCEEEEECCCCSS---SCEEEEETTTCCE--EEECGGGCEECCH
T ss_pred CCCCCCEEEEEECCCCeEEEEEEEEECCC---CeEEEEEEeCCCe--EEEehHHhhcCcH
Confidence 477999999987 579999999988642 3789999999875 8899999987754
No 68
>3feo_A MBT domain-containing protein 1; MBTL1, structural genomics, structural genomics consortium, metal-binding, nucleus, zinc-finger; 2.50A {Homo sapiens}
Probab=93.54 E-value=0.13 Score=51.02 Aligned_cols=52 Identities=25% Similarity=0.495 Sum_probs=43.7
Q ss_pred CCcCCCCEEEEEeC---CeeeeeEEEEEEeeCCeeEEEEEEcCCCCCccceeccc--cccc
Q 020039 50 CPYQVNEKVLAFFQ---SHVYEAKVIQVQYRLKEWTFRVHYLGWNKSWDEWVGVH--RLMK 105 (332)
Q Consensus 50 ~~f~vge~vl~~~~---~~~YeAkIl~~~~~~~~~~Y~VHY~GWn~r~DEWV~~~--ri~k 105 (332)
..|++|-++.+.+. .++..|.|.+|.. ....|||.||...+|.|+..+ .|+.
T Consensus 361 ~~F~~GMKLEAvD~~np~~IcvATV~~v~~----~~l~v~fDgw~~~~d~w~~~~S~~I~P 417 (437)
T 3feo_A 361 HGFRVGMKLEAVDLMEPRLICVATVTRIIH----RLLRIHFDGWEEEYDQWVDCESPDLYP 417 (437)
T ss_dssp CCCCTTCEEEEECTTSTTCEEEEEEEEEET----TEEEEEETTSCGGGCEEEETTCTTEEC
T ss_pred ccCccCCEEEeecCCCCCcEEEEEEeEEcC----CEEEEEECCCCCcCCeEEeCCCCCccc
Confidence 35999999999985 5899999999973 378999999999999998764 5543
No 69
>2rso_A Chromatin-associated protein SWI6; chromodomain, silencing, chromosomal protein, Met transcription; NMR {Schizosaccharomyces pombe}
Probab=93.38 E-value=0.37 Score=37.66 Aligned_cols=35 Identities=14% Similarity=0.358 Sum_probs=27.4
Q ss_pred EEEEEEe--eCCeeEEEEEEcCCCC-Cccceecccccc
Q 020039 70 KVIQVQY--RLKEWTFRVHYLGWNK-SWDEWVGVHRLM 104 (332)
Q Consensus 70 kIl~~~~--~~~~~~Y~VHY~GWn~-r~DEWV~~~ri~ 104 (332)
+|++.+. .+|...|+|++.||.. .++-|.|+..|.
T Consensus 35 ~Il~~r~~~~~g~~~YlVkWkGy~~~~~~TWEP~~nl~ 72 (92)
T 2rso_A 35 KVLKHRMARKGGGYEYLLKWEGYDDPSDNTWSSEADCS 72 (92)
T ss_dssp EEEEEEECTTSSCEEEEEEETTCCCCTTSEEECGGGGG
T ss_pred EEEEEEeecCCCEEEEEEEEccCCCcccCccccHHHHh
Confidence 5665554 3567899999999984 788999998873
No 70
>1h3z_A Hypothetical 62.8 kDa protein C215.07C; nuclear protein, PWWP, chromatin, beta-barrel; NMR {Schizosaccharomyces pombe} SCOP: b.34.9.2
Probab=93.24 E-value=0.12 Score=41.33 Aligned_cols=59 Identities=15% Similarity=0.215 Sum_probs=46.7
Q ss_pred CcCCCCEEEEEeCC-eeeeeEEEEE---E-------eeCCeeEEEEEEcCCCCCccceeccccccccChHhh
Q 020039 51 PYQVNEKVLAFFQS-HVYEAKVIQV---Q-------YRLKEWTFRVHYLGWNKSWDEWVGVHRLMKDTEANR 111 (332)
Q Consensus 51 ~f~vge~vl~~~~~-~~YeAkIl~~---~-------~~~~~~~Y~VHY~GWn~r~DEWV~~~ri~k~t~en~ 111 (332)
.|.+|+.|.+.-+| -|++|+|+.- . ...+...|.|.|-|=+ .| -||+..+|+.+++++.
T Consensus 6 ~~~~GdlVwaK~~gyP~WPa~V~~p~~~~~~~~~~~~~~~~~~~~V~FFg~~-~~-aWv~~~~l~p~~~~~~ 75 (109)
T 1h3z_A 6 NYKPGMRVLTKMSGFPWWPSMVVTESKMTSVARKSKPKRAGTFYPVIFFPNK-EY-LWTGSDSLTPLTSEAI 75 (109)
T ss_dssp CCCTTCEEEEEETTEEEEEEEECCGGGCCHHHHHTCCCSSSCEEEEEETTTT-CC-EEEEGGGEEECCHHHH
T ss_pred cCCCCCEEEEEeCCcCCCCEEEcccHHHhHHhhccCCCCCCCEEEEEEcCCC-CE-EEECHHHeeeCCchHH
Confidence 59999999998877 6999999942 1 0112568999999976 44 8999999999998754
No 71
>2rsn_A Chromo domain-containing protein 1; chromodomain, protein-peptide complex, RNA-mediated gene SIL chromosomal protein, methylation; HET: M3L; NMR {Schizosaccharomyces pombe}
Probab=93.23 E-value=0.12 Score=39.00 Aligned_cols=40 Identities=15% Similarity=0.327 Sum_probs=32.1
Q ss_pred eeeee-EEEEEEee-CCeeEEEEEEcCCCCCccceecccccc
Q 020039 65 HVYEA-KVIQVQYR-LKEWTFRVHYLGWNKSWDEWVGVHRLM 104 (332)
Q Consensus 65 ~~YeA-kIl~~~~~-~~~~~Y~VHY~GWn~r~DEWV~~~ri~ 104 (332)
..|+. +|++.+.. +|...|+|++.||....+-|.|++.|.
T Consensus 20 e~yeVE~Il~~r~~~~g~~~YlVkWkGy~~~~~TWEp~~nl~ 61 (75)
T 2rsn_A 20 DVYEVEDILADRVNKNGINEYYIKWAGYDWYDNTWEPEQNLF 61 (75)
T ss_dssp GCEEEEEEEEEEECSSSCEEEEEEEESSCGGGCEEEEGGGGT
T ss_pred ceEEEEEEEEEEEcCCCcEEEEEEECCCCCcCCeeecHHHcc
Confidence 34555 67776654 567899999999999999999998874
No 72
>3pfs_A Bromodomain and PHD finger-containing protein 3; structural genomics, structural genomics consortium, SGC, PW domain, protein binding; 1.90A {Homo sapiens} PDB: 3lyi_A*
Probab=93.15 E-value=0.094 Score=45.22 Aligned_cols=63 Identities=17% Similarity=0.275 Sum_probs=48.9
Q ss_pred CCCCCcCCCCEEEEEeCC-eeeeeEEEEEEee----------------------------CCeeEEEEEEcCCCCCccce
Q 020039 47 PASCPYQVNEKVLAFFQS-HVYEAKVIQVQYR----------------------------LKEWTFRVHYLGWNKSWDEW 97 (332)
Q Consensus 47 ~~~~~f~vge~vl~~~~~-~~YeAkIl~~~~~----------------------------~~~~~Y~VHY~GWn~r~DEW 97 (332)
.+.+.|++|+.|.+--.| -||+|.|++-... .+...|.|.|.|=+..| -|
T Consensus 32 ~~~~~~~pgdlVWAK~~GyPwwPa~Iidp~~p~~g~~~~~v~ip~pP~~Vlk~~~~~~~~~~~~~ylV~FFd~~~t~-aW 110 (158)
T 3pfs_A 32 EDRGDLEPLELVWAKCRGYPSYPALIIDPKMPREGLLHNGVPIPVPPLDVLKLGEQKQAEAGEKLFLVLFFDNKRTW-QW 110 (158)
T ss_dssp SCCSCCCTTCEEEEECTTSCEEEEEEECTTSCTTCEEETTEEECCCCHHHHHHHHHHHHHHTSCEEEEEECSTTCCE-EE
T ss_pred CcCCCCCCCCEEEEecCCCCCCCEEEcCCCCccccccccccccCCChHHHHhhcccccccCCCCEEEEEEcCCCCce-Ee
Confidence 445579999999998877 6999999883331 13568999999954556 59
Q ss_pred eccccccccChHh
Q 020039 98 VGVHRLMKDTEAN 110 (332)
Q Consensus 98 V~~~ri~k~t~en 110 (332)
|+..+|..++.+.
T Consensus 111 V~~~~L~Pl~~d~ 123 (158)
T 3pfs_A 111 LPRDKVLPLGVED 123 (158)
T ss_dssp EEGGGEEECSSCH
T ss_pred eccccEeecCCch
Confidence 9999999998655
No 73
>3ut1_A Lethal(3)malignant brain tumor-like protein 3; chromatin modification, transcription repression, MBT repeat structural genomics; HET: EPE; 2.05A {Homo sapiens} PDB: 4fl6_A* 1wjs_A
Probab=92.66 E-value=0.22 Score=47.62 Aligned_cols=51 Identities=25% Similarity=0.467 Sum_probs=42.6
Q ss_pred CcCCCCEEEEEeC---CeeeeeEEEEEEeeCCeeEEEEEEcCCCCCccceeccc--cccc
Q 020039 51 PYQVNEKVLAFFQ---SHVYEAKVIQVQYRLKEWTFRVHYLGWNKSWDEWVGVH--RLMK 105 (332)
Q Consensus 51 ~f~vge~vl~~~~---~~~YeAkIl~~~~~~~~~~Y~VHY~GWn~r~DEWV~~~--ri~k 105 (332)
.|++|.++.+.+. ..+..|.|.+|... ...|||.||....|-|+..+ .|+.
T Consensus 143 ~F~vGMKLEavDp~~p~~icvATV~~V~g~----~l~v~~Dg~~~~~d~w~~~~Sp~I~P 198 (324)
T 3ut1_A 143 GFRVGMKLEAVDKKNPSFICVATVTDMVDN----RFLVHFDNWDESYDYWCEASSPHIHP 198 (324)
T ss_dssp SCCTTCEEEEEETTEEEEEEEEEEEEEETT----EEEEEETTSCGGGCEEECTTCTTEEC
T ss_pred ccccCCEEEEecCCCCCcEEEEEEEEEECC----EEEEEECCCCCcCCEEEECCCCCccc
Confidence 5999999999986 36899999998732 59999999999999999764 4443
No 74
>2daq_A WHSC1L1 protein, isoform long; PWWP domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.34.9.2
Probab=92.48 E-value=0.092 Score=42.07 Aligned_cols=60 Identities=17% Similarity=0.226 Sum_probs=45.0
Q ss_pred CCCCCcCCCCEEEEEeCC-eeeeeEEEEEEee--------CCeeEEEEEEcCCCCCccceeccccccccCh
Q 020039 47 PASCPYQVNEKVLAFFQS-HVYEAKVIQVQYR--------LKEWTFRVHYLGWNKSWDEWVGVHRLMKDTE 108 (332)
Q Consensus 47 ~~~~~f~vge~vl~~~~~-~~YeAkIl~~~~~--------~~~~~Y~VHY~GWn~r~DEWV~~~ri~k~t~ 108 (332)
..|-.|.+|+.|.+.-+| .|++|+|++.... .....|.|+|-|= ..| -||+..+|+.+++
T Consensus 4 ~~g~~~~~GdlVwaK~~g~p~WPa~V~~~~~~p~~~~~~~~~~~~~~V~FFg~-~~~-awv~~~~l~p~~~ 72 (110)
T 2daq_A 4 GSSGKLHYKQIVWVKLGNYRWWPAEICNPRSVPLNIQGLKHDLGDFPVFFFGS-HDY-YWVHQGRVFPYVE 72 (110)
T ss_dssp SCCCSCCSSEEEEEECSSSCEEEEEECCTTTSCHHHHTSCCCSSCEEEEETTT-TEE-EEECSSSSEECCS
T ss_pred CCCCCCCCCCEEEEEeCCCCCCceeeCChhhCCHHHhhccCCCCcEEEEEecC-CCE-EEEcHHHCcCcch
Confidence 345579999999998776 6999999977321 1235799999993 222 5999999988865
No 75
>2gfu_A DNA mismatch repair protein MSH6; PWWP domain, tudor domain, DNA binding, DNA binding protein; HET: DNA; NMR {Homo sapiens}
Probab=91.90 E-value=0.24 Score=41.09 Aligned_cols=62 Identities=16% Similarity=0.215 Sum_probs=46.3
Q ss_pred CCCcCCCCEEEEEeCC-eeeeeEEEEEEe-------eCCeeEEEEEEcCCCCCccceeccccccccChHhh
Q 020039 49 SCPYQVNEKVLAFFQS-HVYEAKVIQVQY-------RLKEWTFRVHYLGWNKSWDEWVGVHRLMKDTEANR 111 (332)
Q Consensus 49 ~~~f~vge~vl~~~~~-~~YeAkIl~~~~-------~~~~~~Y~VHY~GWn~r~DEWV~~~ri~k~t~en~ 111 (332)
+..|.+|+.|.+.-+| -|++|+|+.... ......|.|.|-|=...| -||+..+|+.+++...
T Consensus 20 ~~~~~~GdlVwaK~~g~P~WPa~V~~~~~~~~~~~~~~~~~~~~V~FFg~~~~~-aWv~~~~l~pf~~~~~ 89 (134)
T 2gfu_A 20 SSDFSPGDLVWAKMEGYPWWPSLVYNHPFDGTFIREKGKSVRVHVQFFDDSPTR-GWVSKRLLKPYTGSKS 89 (134)
T ss_dssp SCCCCTTSEEEECCTTSCCEEEECCCCSSTTCCEEESSSCEEEEEEECSSSCEE-EEECGGGEEESCCTTS
T ss_pred CCCCCCCCEEEEeecCCCCCCeeecchhhhhhhhhccCCCceEEEEECCCCCce-EEECHHHcccCcchhH
Confidence 3469999999998776 699999988632 122358999999854322 5999999999876443
No 76
>4fu6_A PC4 and SFRS1-interacting protein; structural genomics consortium, SGC, transcription; 2.10A {Homo sapiens} PDB: 2b8a_A 2nlu_A
Probab=91.88 E-value=0.075 Score=45.19 Aligned_cols=56 Identities=13% Similarity=0.284 Sum_probs=44.2
Q ss_pred CcCCCCEEEEEeCC-eeeeeEEEEEEee---CCeeEEEEEEcCCCCCccceeccccccccCh
Q 020039 51 PYQVNEKVLAFFQS-HVYEAKVIQVQYR---LKEWTFRVHYLGWNKSWDEWVGVHRLMKDTE 108 (332)
Q Consensus 51 ~f~vge~vl~~~~~-~~YeAkIl~~~~~---~~~~~Y~VHY~GWn~r~DEWV~~~ri~k~t~ 108 (332)
.|.+|+.|.+--+| .|++|+|+..... .....|.|+|-|-+.+ -||...+|+.+++
T Consensus 22 ~f~~GdlVwaK~~g~p~WPa~V~~~~~~~~~~~~~~~~V~FfG~~~~--awv~~~~l~~f~e 81 (153)
T 4fu6_A 22 DFKPGDLIFAKMKGYPHWPARVDEVPDGAVKPPTNKLPIFFFGTHET--AFLGPKDIFPYSE 81 (153)
T ss_dssp GCCTTCEEEECCTTSCCEEEEECCCC---CCCCTTCEEEEETTTCCE--EEECGGGEEEHHH
T ss_pred CCCCCCEEEEeCCCCCCCCEEEeEchhhccCCCCCEEEEEecCCCCe--EEeCHHHccChHh
Confidence 59999999998877 6999999876432 2234899999997654 5999999999864
No 77
>2hqx_A P100 CO-activator tudor domain; human P100 tudor domain, proteolytic fragment, PSI, structural genomics; 1.42A {Homo sapiens} SCOP: b.34.9.1 PDB: 2hqe_A 3omc_A* 3omg_A* 2o4x_A 2e6n_A 2o4x_B
Probab=91.59 E-value=0.57 Score=42.07 Aligned_cols=53 Identities=23% Similarity=0.269 Sum_probs=43.7
Q ss_pred CcCCCCEEEEEe-CCeeeeeEEEEEEeeCCeeEEEEEEcCCCCCccceeccccccccCh
Q 020039 51 PYQVNEKVLAFF-QSHVYEAKVIQVQYRLKEWTFRVHYLGWNKSWDEWVGVHRLMKDTE 108 (332)
Q Consensus 51 ~f~vge~vl~~~-~~~~YeAkIl~~~~~~~~~~Y~VHY~GWn~r~DEWV~~~ri~k~t~ 108 (332)
...+|+.|++.+ .+.||-|+|+++... ..+.|+|.+|... ++|+.++|....+
T Consensus 65 ~~~~G~~c~a~~~d~~wyRa~V~~~~~~---~~~~V~~vDyGn~--~~v~~~~lr~l~~ 118 (246)
T 2hqx_A 65 APRRGEFCIAKFVDGEWYRARVEKVESP---AKIHVFYIDYGNR--EVLPSTRLGTLSP 118 (246)
T ss_dssp CCCTTCEEEEECTTSCEEEEEEEEEEET---TEEEEEETTTCCE--EEECGGGEECCCG
T ss_pred CCCCCCEEEEEcCCCCEEEEEEEEEcCC---CeEEEEEEeCCCe--EEEeHHHhhcCCH
Confidence 467999999988 689999999999643 3789999998764 7899988887753
No 78
>2dnt_A Chromodomain protein, Y chromosome-like, isoform B; histone H3 tail, choromatin organization modifier, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.34.13.2
Probab=90.01 E-value=0.2 Score=37.94 Aligned_cols=35 Identities=14% Similarity=0.404 Sum_probs=27.9
Q ss_pred EEEEEEe-eCCeeEEEEEEcCCCCCccceecccccc
Q 020039 70 KVIQVQY-RLKEWTFRVHYLGWNKSWDEWVGVHRLM 104 (332)
Q Consensus 70 kIl~~~~-~~~~~~Y~VHY~GWn~r~DEWV~~~ri~ 104 (332)
+|++.+. .++...|+|++.||....+-|.+++.|.
T Consensus 18 ~Il~~r~~~~g~~~YlVKWkGy~~~~~TWEp~~~l~ 53 (78)
T 2dnt_A 18 RIVDKRKNKKGKTEYLVRWKGYDSEDDTWEPEQHLV 53 (78)
T ss_dssp CEEEEEECTTSCEEEEECBTTBCGGGCEEEETTTCT
T ss_pred EEEEEEEcCCCcEEEEEEECCCCccCCceecHHHHH
Confidence 3444444 3567899999999999999999998875
No 79
>3ntk_A Maternal protein tudor; tudor domain, OB-fold, GERM cell formation, transcription; 1.80A {Drosophila melanogaster} PDB: 3nth_A* 3nti_A*
Probab=89.78 E-value=0.49 Score=40.48 Aligned_cols=50 Identities=14% Similarity=0.231 Sum_probs=38.6
Q ss_pred CcCCCCEEEEEe--CCeeeeeEEEEEEeeCCeeEEEEEEcCCCCCccceeccccccccC
Q 020039 51 PYQVNEKVLAFF--QSHVYEAKVIQVQYRLKEWTFRVHYLGWNKSWDEWVGVHRLMKDT 107 (332)
Q Consensus 51 ~f~vge~vl~~~--~~~~YeAkIl~~~~~~~~~~Y~VHY~GWn~r~DEWV~~~ri~k~t 107 (332)
...+|+.|++.+ .+.||-|+|+++...+ .+.|+|.+|... +.| ++|....
T Consensus 47 ~~~~G~~c~A~~~~d~~wyRa~I~~~~~~~---~~~V~fvDyGn~--~~v--~~lr~l~ 98 (169)
T 3ntk_A 47 DLKEGALCVAQFPEDEVFYRAQIRKVLDDG---KCEVHFIDFGNN--AVT--QQFRQLP 98 (169)
T ss_dssp CCCTTCEEEEEETTTTEEEEEEEEEECSTT---CEEEEETTTTEE--EEE--SCEECCC
T ss_pred CCCCCCEEEEEECCCCcEEEEEEEEECCCC---EEEEEEEecCCe--EEh--hhhhccC
Confidence 477999999987 5899999999986532 799999999875 334 5665554
No 80
>3qby_A Hepatoma-derived growth factor-related protein 2; HDGF2, structural genomics consortium, SGC, protein binding; HET: M3L; 1.95A {Homo sapiens} SCOP: b.34.9.2 PDB: 3qj6_A* 3eae_A 1n27_A
Probab=89.57 E-value=0.18 Score=39.52 Aligned_cols=55 Identities=11% Similarity=0.281 Sum_probs=44.2
Q ss_pred CcCCCCEEEEEeCC-eeeeeEEEEEEee---CCeeEEEEEEcCCCCCccceeccccccccC
Q 020039 51 PYQVNEKVLAFFQS-HVYEAKVIQVQYR---LKEWTFRVHYLGWNKSWDEWVGVHRLMKDT 107 (332)
Q Consensus 51 ~f~vge~vl~~~~~-~~YeAkIl~~~~~---~~~~~Y~VHY~GWn~r~DEWV~~~ri~k~t 107 (332)
.|++|+.|.+.-+| -+++|+|+++... ....+|.|.|-|-+.+ -||+..+|+.+.
T Consensus 5 ~f~~GdlVwaK~~g~p~WPa~V~~~~~~~~k~~~~~~~V~FFGt~~~--awv~~~~l~pf~ 63 (94)
T 3qby_A 5 AFKPGDLVFAKMKGYPHWPARIDDIADGAVKPPPNKYPIFFFGTHET--AFLGPKDLFPYD 63 (94)
T ss_dssp CCCTTCEEEECCTTSCCEEEEECCCCTTSBCCCTTCEEEEETTTCCE--EEECGGGEEEHH
T ss_pred cCccCCEEEEecCCCCCCCEEEeecccccccCCCCEEEEEEEcCCCc--ceEchhHeeEHH
Confidence 59999999998776 6899999986431 1235899999997653 599999999986
No 81
>2qqr_A JMJC domain-containing histone demethylation protein 3A; histone lysine demethylase, tandem hybrid tudor domains, metal binding protein; 1.80A {Homo sapiens} SCOP: b.34.9.1 b.34.9.1 PDB: 2qqs_A* 2gfa_A* 2gf7_A*
Probab=89.45 E-value=1.2 Score=36.56 Aligned_cols=53 Identities=11% Similarity=0.263 Sum_probs=43.1
Q ss_pred CcCCCCEEEEEeC-CeeeeeEEEEEEeeCCeeEEEEEEcCCCCCccceeccccccccCh
Q 020039 51 PYQVNEKVLAFFQ-SHVYEAKVIQVQYRLKEWTFRVHYLGWNKSWDEWVGVHRLMKDTE 108 (332)
Q Consensus 51 ~f~vge~vl~~~~-~~~YeAkIl~~~~~~~~~~Y~VHY~GWn~r~DEWV~~~ri~k~t~ 108 (332)
.+.+|++|.|.|. +..|.|+|+++... ..|-|+|. ..+|-.+.+...|....-
T Consensus 5 ~v~vGq~V~akh~ngryy~~~V~~~~~~---~~y~V~F~--DgS~s~dl~peDIvs~dc 58 (118)
T 2qqr_A 5 SITAGQKVISKHKNGRFYQCEVVRLTTE---TFYEVNFD--DGSFSDNLYPEDIVSQDC 58 (118)
T ss_dssp CCCTTCEEEEECTTSSEEEEEEEEEEEE---EEEEEEET--TSCEEEEECGGGBCSSCH
T ss_pred eeccCCEEEEECCCCCEEeEEEEEEeeE---EEEEEEcC--CCCccCCCCHhhcccccc
Confidence 3789999999997 68999999998764 68999996 566667888888876654
No 82
>1g6z_A CLR4 protein; transferase; NMR {Schizosaccharomyces pombe} SCOP: b.34.13.2
Probab=89.23 E-value=0.11 Score=38.42 Aligned_cols=35 Identities=14% Similarity=0.417 Sum_probs=28.1
Q ss_pred EEEEEEeeC-CeeE-EEEEEcCCCCCccceecccccc
Q 020039 70 KVIQVQYRL-KEWT-FRVHYLGWNKSWDEWVGVHRLM 104 (332)
Q Consensus 70 kIl~~~~~~-~~~~-Y~VHY~GWn~r~DEWV~~~ri~ 104 (332)
+|++.+..+ |... |+|++.||....+-|.|++.|.
T Consensus 13 ~Il~~r~~~~g~~~~YlVKWkGy~~~~~TWEp~enL~ 49 (70)
T 1g6z_A 13 RIVDEKLDRNGAVKLYRIRWLNYSSRSDTWEPPENLS 49 (70)
T ss_dssp SCSEEECCTTSSCCEEEECCTTTTSSCCEEECGGGGS
T ss_pred EEEEEEEcCCCcEEEEEEEECCCCCCCCceecHHHHh
Confidence 455555555 6677 9999999999999999998873
No 83
>2wac_A CG7008-PA; unknown function, tudor, beta-barrel, nuclease domain, tudor P100, SND1, methylated arginine, SDMA, splicing; 2.10A {Drosophila melanogaster}
Probab=89.00 E-value=1.1 Score=39.15 Aligned_cols=52 Identities=27% Similarity=0.271 Sum_probs=42.1
Q ss_pred CcCCCCEEEEEe--CCeeeeeEEEEEEeeCCeeEEEEEEcCCCCCccceeccccccccCh
Q 020039 51 PYQVNEKVLAFF--QSHVYEAKVIQVQYRLKEWTFRVHYLGWNKSWDEWVGVHRLMKDTE 108 (332)
Q Consensus 51 ~f~vge~vl~~~--~~~~YeAkIl~~~~~~~~~~Y~VHY~GWn~r~DEWV~~~ri~k~t~ 108 (332)
...+|+.|++.+ .+.||-|+|+++.. ..+.|+|.++... +.|+.++|....+
T Consensus 51 ~~~~g~~c~a~~~~d~~wyRa~V~~v~~----~~~~V~~vDyG~~--~~v~~~~l~~l~~ 104 (218)
T 2wac_A 51 TPKRGDLVAAQFTLDNQWYRAKVERVQG----SNATVLYIDYGNK--ETLPTNRLAALPP 104 (218)
T ss_dssp CCCTTCEEEEECTTTCCEEEEEEEEEET----TEEEEEETTTCCE--EEEEGGGEEECCG
T ss_pred cCCcCCEEEEEECCCCeEEEEEEEEecC----CeEEEEEEecCCe--EEEchHHcccCCh
Confidence 467999999987 47999999999864 4789999988763 6788888876654
No 84
>4b9w_A TDRD1, tudor domain-containing protein 1; replication; HET: 2MR; 2.10A {Mus musculus}
Probab=88.01 E-value=1 Score=39.34 Aligned_cols=53 Identities=21% Similarity=0.298 Sum_probs=42.2
Q ss_pred CcCCCCEEEEEe--CCeeeeeEEEEEEeeCCeeEEEEEEcCCCCCccceeccccccccCh
Q 020039 51 PYQVNEKVLAFF--QSHVYEAKVIQVQYRLKEWTFRVHYLGWNKSWDEWVGVHRLMKDTE 108 (332)
Q Consensus 51 ~f~vge~vl~~~--~~~~YeAkIl~~~~~~~~~~Y~VHY~GWn~r~DEWV~~~ri~k~t~ 108 (332)
..++|+.|++.+ .+.||-|+|+++... ..+.|+|..+... ++|+.++|....+
T Consensus 65 ~~~~G~~c~a~~~~d~~wyRa~V~~~~~~---~~~~V~~vDyG~~--~~v~~~~l~~l~~ 119 (201)
T 4b9w_A 65 KAEIGRPCCAFFSGDGNWYRALVKEILPS---GNVKVHFVDYGNV--EEVTTDQLQAILP 119 (201)
T ss_dssp CCCTTCEEEEEETTTTEEEEEEEEEECTT---SCEEEEETTTCCE--EEECGGGEEECCG
T ss_pred CCCCCCEEEEEECCCCeEEEEEEEEECCC---CeEEEEEEccCCE--EEEEHHHhccChH
Confidence 367899999987 479999999988543 2588999998874 7899998877643
No 85
>3llr_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase, methylysine binding, STR genomics consortium, SGC, alternative promoter usage; HET: DNA BTB; 2.30A {Homo sapiens} SCOP: b.34.9.0
Probab=87.65 E-value=0.41 Score=41.02 Aligned_cols=56 Identities=20% Similarity=0.198 Sum_probs=45.7
Q ss_pred CcCCCCEEEEEeCC-eeeeeEEEEEEee----CCeeEEEEEEcCCCCCccceeccccccccCh
Q 020039 51 PYQVNEKVLAFFQS-HVYEAKVIQVQYR----LKEWTFRVHYLGWNKSWDEWVGVHRLMKDTE 108 (332)
Q Consensus 51 ~f~vge~vl~~~~~-~~YeAkIl~~~~~----~~~~~Y~VHY~GWn~r~DEWV~~~ri~k~t~ 108 (332)
.|.+|+.|.+--+| -|++|+|+..... ....+|.|.|-|-+.+ -||..++|+.+++
T Consensus 16 ~f~~GDLVWaKvkG~PwWPa~V~~~~~~~k~~~~~~~~~V~FFG~~~~--awv~~~~L~pf~e 76 (154)
T 3llr_A 16 GFGIGELVWGKLRGFSWWPGRIVSWWMTGRSRAAEGTRWVMWFGDGKF--SVVCVEKLMPLSS 76 (154)
T ss_dssp CCCTTCEEEECCTTSCCEEEEEECGGGTTSCCCCTTEEEEEETTTCCE--EEEEGGGEEEGGG
T ss_pred CCccCCEEEEecCCCCCCCEEEecccccccccCCCCEEEEEEeCCCCE--EEEcHHHCcchhh
Confidence 69999999998766 6999999986521 1234899999999855 6999999999865
No 86
>3db3_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, tandem tudor domains, LI metal binding, DNA replication; HET: M3L; 2.40A {Homo sapiens} PDB: 3db4_A 2l3r_A*
Probab=87.58 E-value=1.4 Score=37.93 Aligned_cols=40 Identities=30% Similarity=0.395 Sum_probs=33.5
Q ss_pred CcCCCCEEEEEeC--CeeeeeEEEEEEee----------------CCeeEEEEEEcCC
Q 020039 51 PYQVNEKVLAFFQ--SHVYEAKVIQVQYR----------------LKEWTFRVHYLGW 90 (332)
Q Consensus 51 ~f~vge~vl~~~~--~~~YeAkIl~~~~~----------------~~~~~Y~VHY~GW 90 (332)
.|++||.|-|... |-|+||+|++|-.. .....|.|-|.++
T Consensus 10 lYKinelVDarD~~~GAWFEA~Iv~Vtr~~~~~~~p~~s~~~~~~~edviYhVkyddy 67 (161)
T 3db3_A 10 LYKVNEYVDARDTNMGAWFEAQVVRVTRKAPSRDEPCSSTSRPALEEDVIYHVKYDDY 67 (161)
T ss_dssp SSCTTCEEEEECTTTCCEEEEEEEEEEEC-----------------CCEEEEEEESSC
T ss_pred eEEecceeeeeccCCCcceEEEEEEEEecCCCCCCcccccccCCCcCceEEEEEeccC
Confidence 7999999999994 89999999997653 1346899999887
No 87
>4b9x_A TDRD1, tudor domain-containing protein 1; replication; 2.80A {Mus musculus}
Probab=86.97 E-value=1.3 Score=39.44 Aligned_cols=53 Identities=21% Similarity=0.298 Sum_probs=42.4
Q ss_pred CcCCCCEEEEEe--CCeeeeeEEEEEEeeCCeeEEEEEEcCCCCCccceeccccccccCh
Q 020039 51 PYQVNEKVLAFF--QSHVYEAKVIQVQYRLKEWTFRVHYLGWNKSWDEWVGVHRLMKDTE 108 (332)
Q Consensus 51 ~f~vge~vl~~~--~~~~YeAkIl~~~~~~~~~~Y~VHY~GWn~r~DEWV~~~ri~k~t~ 108 (332)
..++|+.|++.+ .+.||-|+|+++... ..+.|+|..+... ++|+.++|....+
T Consensus 65 ~~~~G~~c~a~~~~d~~WyRa~V~~~~~~---~~~~V~~vDyGn~--~~v~~~~l~~l~~ 119 (226)
T 4b9x_A 65 KAEIGRPCCAFFSGDGNWYRALVKEILPS---GNVKVHFVDYGNV--EEVTTDQLQAILP 119 (226)
T ss_dssp CCCTTCEEEEEETTTTEEEEEEEEEECSS---SEEEEECTTTCCE--EEEEGGGEECCCG
T ss_pred CCCCCCEEEEEECCCCeEEEEEEEEECCC---CeEEEEEEecCCE--EEEEHHHhccChH
Confidence 457899999987 479999999988543 2588999998874 7899998877654
No 88
>1khc_A DNA cytosine-5 methyltransferase 3B2; five beta-sheets barrel followed by five-helix bundle; HET: DNA; 1.80A {Mus musculus} SCOP: b.34.9.2 PDB: 3flg_A* 3qkj_A*
Probab=86.70 E-value=0.84 Score=38.65 Aligned_cols=58 Identities=12% Similarity=0.111 Sum_probs=45.0
Q ss_pred CCCcCCCCEEEEEeCC-eeeeeEEEEEEeeC----CeeEEEEEEcCCCCCccceeccccccccCh
Q 020039 49 SCPYQVNEKVLAFFQS-HVYEAKVIQVQYRL----KEWTFRVHYLGWNKSWDEWVGVHRLMKDTE 108 (332)
Q Consensus 49 ~~~f~vge~vl~~~~~-~~YeAkIl~~~~~~----~~~~Y~VHY~GWn~r~DEWV~~~ri~k~t~ 108 (332)
+..|.+|+.|.+.-+| -|++|+|++..... ....|.|.|-|-+. + -||..++|+.+++
T Consensus 9 ~~~~~~GDlVWaKvkGyPwWPa~V~~~~~~~~~~~~~~~~~V~FFG~~~-~-awv~~~~L~p~~~ 71 (147)
T 1khc_A 9 DKEFGIGDLVWGKIKGFSWWPAMVVSWKATSKRQAMPGMRWVQWFGDGK-F-SEISADKLVALGL 71 (147)
T ss_dssp SSSCCTTCEEEEEETTTEEEEEEEECGGGTTSCCCCTTEEEEEETTTCC-E-EEEEGGGCEETTS
T ss_pred CccCcCCCEEEEecCCcCCCCEEeccchhhhcccCCCCeEEEEEecCCC-E-EEEcHHHCccchH
Confidence 3469999999998766 69999999765421 22489999999664 3 7999999998754
No 89
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=86.49 E-value=1.3 Score=40.28 Aligned_cols=40 Identities=30% Similarity=0.409 Sum_probs=34.2
Q ss_pred CcCCCCEEEEEeC--CeeeeeEEEEEEeeC-------CeeEEEEEEcCC
Q 020039 51 PYQVNEKVLAFFQ--SHVYEAKVIQVQYRL-------KEWTFRVHYLGW 90 (332)
Q Consensus 51 ~f~vge~vl~~~~--~~~YeAkIl~~~~~~-------~~~~Y~VHY~GW 90 (332)
.|+|||.|.|.+. |.||||+|++|-... +...|-|-|.++
T Consensus 2 ~yki~~~vd~~d~~~Gawfea~i~~v~~~~~~~~~~~d~~~y~v~y~~~ 50 (226)
T 3ask_A 2 LYKVNEYVDARDTNMGAWFEAQVVRVTRKAPSRPALEEDVIYHVKYDDY 50 (226)
T ss_dssp CSCTTCEEEEECTTTCCEEEEEEEEEEECC------CCCEEEEEEETTC
T ss_pred ccccCceEEeeecCCCceeEEEEEEEeccccccCCCCCceEEEeecccC
Confidence 4899999999994 799999999998743 457899999987
No 90
>3mea_A SAGA-associated factor 29 homolog; structural genomics consortium, SGC, nucleus, transcription, transcription regulation, chromosomal protein, DNA-binding; HET: M3L; 1.26A {Homo sapiens} PDB: 3meu_A* 3met_A* 3me9_A* 3mev_A* 3lx7_A 3mew_A
Probab=85.74 E-value=0.85 Score=40.03 Aligned_cols=41 Identities=20% Similarity=0.263 Sum_probs=33.2
Q ss_pred CCCcCCCCEEEEEeCC--eeeeeEEEEEEeeCCeeEEEEEEcCC
Q 020039 49 SCPYQVNEKVLAFFQS--HVYEAKVIQVQYRLKEWTFRVHYLGW 90 (332)
Q Consensus 49 ~~~f~vge~vl~~~~~--~~YeAkIl~~~~~~~~~~Y~VHY~GW 90 (332)
...|..|.+||+.+.. .+|.|.|...... ....|.|.|.|=
T Consensus 114 ~~~f~~G~~VLAlYP~TT~FY~A~V~~~p~~-~~~~y~L~FEdd 156 (180)
T 3mea_A 114 EALFQKEQLVLALYPQTTCFYRALIHAPPQR-PQDDYSVLFEDT 156 (180)
T ss_dssp GGSCCTTCEEEEECTTSSEEEEEEEEECCSS-TTCCEEEEEBCT
T ss_pred cccCCCCCEEEEeCCCCceeeEEEEecCCCC-CCCcEEEEEcCC
Confidence 4469999999999974 7999999987543 335799999874
No 91
>3bdl_A Staphylococcal nuclease domain-containing protein 1; staphylococcal nuclease OB fold, tudor domain, cytoplasm, HOST-virus interaction, nucleus; HET: CIT; 1.90A {Homo sapiens}
Probab=85.51 E-value=1.8 Score=43.91 Aligned_cols=53 Identities=23% Similarity=0.272 Sum_probs=44.4
Q ss_pred CcCCCCEEEEEe-CCeeeeeEEEEEEeeCCeeEEEEEEcCCCCCccceeccccccccCh
Q 020039 51 PYQVNEKVLAFF-QSHVYEAKVIQVQYRLKEWTFRVHYLGWNKSWDEWVGVHRLMKDTE 108 (332)
Q Consensus 51 ~f~vge~vl~~~-~~~~YeAkIl~~~~~~~~~~Y~VHY~GWn~r~DEWV~~~ri~k~t~ 108 (332)
...+|+.|++.+ .+.||-|+|+++.. ...+.|+|.+|... ++|+.++|....+
T Consensus 411 ~~~~G~~c~a~~~d~~wyRa~I~~v~~---~~~~~V~fvDyGn~--e~v~~~~Lr~l~~ 464 (570)
T 3bdl_A 411 APRRGEFCIAKFVDGEWYRARVEKVES---PAKIHVFYIDYGNR--EVLPSTRLGTLSP 464 (570)
T ss_dssp CCCTTCEEEEECTTSCEEEEEEEEEEE---TTEEEEEETTTCCE--EEECGGGEECCCG
T ss_pred CCCcCCEEEEEECCCCEEEEEEEEEcC---CCeEEEEEEeCCCe--EEEEHHHCccCCH
Confidence 467999999998 78999999999976 24789999999874 7899988887653
No 92
>3mp6_A MBP, SGF29, maltose-binding periplasmic protein, linker, SAGA associated factor 29; histone, tudor domain, histone binding protei; HET: MLY MAL; 1.48A {Escherichia coli} PDB: 3mp1_A* 3mp8_A*
Probab=85.15 E-value=1.1 Score=44.52 Aligned_cols=46 Identities=30% Similarity=0.345 Sum_probs=36.2
Q ss_pred CCCCCCCCCCcCCCCEEEEEeCC--eeeeeEEEEEEeeCCeeEEEEEEcCC
Q 020039 42 PCPPTPASCPYQVNEKVLAFFQS--HVYEAKVIQVQYRLKEWTFRVHYLGW 90 (332)
Q Consensus 42 ~~~~~~~~~~f~vge~vl~~~~~--~~YeAkIl~~~~~~~~~~Y~VHY~GW 90 (332)
|=|+..|...|.+|++||+.+.. +.|.|.|...... ..|.|+|.|=
T Consensus 448 ~~p~~~~~~~~~~~~~v~a~~p~tt~fy~a~v~~~~~~---~~~~~~f~~~ 495 (522)
T 3mp6_A 448 LIPPGFPTKNYPPGTKVLARYPETTTFYPAIVIGTKRD---GTCRLRFDGE 495 (522)
T ss_dssp EECSSCCCCCCCTTCEEEEECTTCSEEEEEEEEEECTT---SCEEEEETTC
T ss_pred ECCCCCcccCCCCCCEEEEECCCCcceEeEEEecCCCC---CeEEEEecCC
Confidence 33455666689999999999974 7999999986443 2699999993
No 93
>3f70_A Lethal(3)malignant brain tumor-like 2 protein; MBT, chromatin regulator, metal-binding, nucleus, transcript transcription regulation, zinc-finger; HET: MLZ; 2.10A {Homo sapiens} PDB: 3dbb_A* 3cey_A
Probab=84.31 E-value=1.4 Score=43.94 Aligned_cols=48 Identities=19% Similarity=0.153 Sum_probs=36.4
Q ss_pred CCcCCCCEEEEEeC---CeeeeeEEEEEEeeCCeeEEEEEEcCCCCCccceeccc
Q 020039 50 CPYQVNEKVLAFFQ---SHVYEAKVIQVQYRLKEWTFRVHYLGWNKSWDEWVGVH 101 (332)
Q Consensus 50 ~~f~vge~vl~~~~---~~~YeAkIl~~~~~~~~~~Y~VHY~GWn~r~DEWV~~~ 101 (332)
..|++|.+|.+.+. .....|.|.+|.. ..++|||.||..+.|-|+..+
T Consensus 152 ~~F~~GmkLE~vD~~~~~~~~vAtV~~v~g----~rl~l~~~~~~~~~dfWc~~~ 202 (456)
T 3f70_A 152 YPFRQGMRLEVVDKSQVSRTRMAVVDTVIG----GRLRLLYEDGDSDDDFWCHMW 202 (456)
T ss_dssp CSSCTTCEEEEECTTCTTCEEEEEEEEEET----TEEEEEECC----CCEEEETT
T ss_pred CCCCCCCEEEEECCCCCcceEEEEEEEEEC----CEEEEEEcCCCCCCceEEeCC
Confidence 36999999999986 3567788888863 489999999999999999763
No 94
>2xdp_A Lysine-specific demethylase 4C; oxidoreductase, histone modification; 1.56A {Homo sapiens}
Probab=83.22 E-value=1.2 Score=36.79 Aligned_cols=52 Identities=13% Similarity=0.208 Sum_probs=42.5
Q ss_pred CcCCCCEEEEEeC-CeeeeeEEEEEEeeCCeeEEEEEEcCCCCCccceeccccccccC
Q 020039 51 PYQVNEKVLAFFQ-SHVYEAKVIQVQYRLKEWTFRVHYLGWNKSWDEWVGVHRLMKDT 107 (332)
Q Consensus 51 ~f~vge~vl~~~~-~~~YeAkIl~~~~~~~~~~Y~VHY~GWn~r~DEWV~~~ri~k~t 107 (332)
.+.+|++|.|.|. |..|.|+|+.+.. +..|-|+|. ..+|-.++.+..|....
T Consensus 6 ~v~vGq~V~ak~~ngryy~~~V~~~~~---~~~y~V~F~--DgS~s~dl~PedIvs~d 58 (123)
T 2xdp_A 6 VISVGQTVITKHRNTRYYSCRVMAVTS---QTFYEVMFD--DGSFSRDTFPEDIVSRD 58 (123)
T ss_dssp CCCTTCCCCCCCCCCCCCCCEEEEEEE---EEEEEEEET--TSCEEEEECGGGBCSSC
T ss_pred ccccCCEEEEECCCCcEEeEEEEEEee---EEEEEEEcC--CCCccCCCCHhHccccc
Confidence 3789999999997 7899999999986 568999996 56677788777776543
No 95
>3l42_A Peregrin; transcription regulation, histone H3 acetylation, chromatin modification, structural genomics, structural genomics CONS SGC, activator; 1.30A {Homo sapiens} PDB: 3mo8_A* 2x4w_A* 2x35_A* 2x4x_A* 2x4y_A*
Probab=82.46 E-value=0.67 Score=38.62 Aligned_cols=59 Identities=19% Similarity=0.376 Sum_probs=45.5
Q ss_pred CcCCCCEEEEEeCC-eeeeeEEEEEEee----------------------------CCeeEEEEEEcCCCCCccceeccc
Q 020039 51 PYQVNEKVLAFFQS-HVYEAKVIQVQYR----------------------------LKEWTFRVHYLGWNKSWDEWVGVH 101 (332)
Q Consensus 51 ~f~vge~vl~~~~~-~~YeAkIl~~~~~----------------------------~~~~~Y~VHY~GWn~r~DEWV~~~ 101 (332)
.|+.|+.|.+--.| -||.|.|++-... .+...|.|.|.|=...| -||+.+
T Consensus 5 ~~~~~dlVWAK~~gyP~wPa~Iidp~~p~~g~~~~g~~ip~pP~~Vl~~~~~~~~~~~~~~y~V~FFd~~~t~-aWv~~~ 83 (130)
T 3l42_A 5 PLDALDLVWAKCRGYPSYPALIIDPKMPREGMFHHGVPIPVPPLEVLKLGEQMTQEAREHLYLVLFFDNKRTW-QWLPRT 83 (130)
T ss_dssp SSCTTCEEEECCTTSCCEEEEEECTTSCTTCEEETTEEECCCCHHHHHHHHHHHHHCSSCEEEEEESSTTCCE-EEEEGG
T ss_pred cCCCCCEEEEecccCCCCCEEEcCCCCccccccccCccCCCChHHHHhhcccccccCCCcEEEEEeCCCCCce-Eeeccc
Confidence 59999999998766 6999999873211 12568999999944555 599999
Q ss_pred cccccChHh
Q 020039 102 RLMKDTEAN 110 (332)
Q Consensus 102 ri~k~t~en 110 (332)
.|..++.++
T Consensus 84 ~i~pl~~d~ 92 (130)
T 3l42_A 84 KLVPLGVNQ 92 (130)
T ss_dssp GEEESSSCH
T ss_pred ceeecCCch
Confidence 999887554
No 96
>3dlm_A Histone-lysine N-methyltransferase setdb1; setdb1_human, structural genomics, structural genomics consortium, SGC, alternative splicing; 1.77A {Homo sapiens}
Probab=78.35 E-value=4.5 Score=36.29 Aligned_cols=51 Identities=14% Similarity=0.277 Sum_probs=43.6
Q ss_pred CCCCCCCcCCCCEEEEEeCCeeeeeEEEEEEeeCCeeEEEEEEcCCCCCccceeccc
Q 020039 45 PTPASCPYQVNEKVLAFFQSHVYEAKVIQVQYRLKEWTFRVHYLGWNKSWDEWVGVH 101 (332)
Q Consensus 45 ~~~~~~~f~vge~vl~~~~~~~YeAkIl~~~~~~~~~~Y~VHY~GWn~r~DEWV~~~ 101 (332)
|+.|...+.+|+++-.-+.|.|+.|+|++++-. -=.|+|.+=+++ |||-.+
T Consensus 152 P~rpmv~~~~GQ~i~~E~~g~w~~~~V~~vD~S----Lv~v~f~~dkr~--EWIYRG 202 (213)
T 3dlm_A 152 PNRPMVLLKSGQLIKTEWEGTWWKSRVEEVDGS----LVRILFLDDKRC--EWIYRG 202 (213)
T ss_dssp TCCCCCCCCTTCEEEEEETTEEEEEEEEEEETT----EEEEEETTTTEE--EEEETT
T ss_pred CCCceEEcCCCCEEEEEecCcEEEEEEEEEcce----eEEEEEcCCCee--EEEEcC
Confidence 578999999999999999999999999999754 667899887764 999653
No 97
>3nrw_A Phage integrase/site-specific recombinase; alpha-helical domain, structural genomics, PSI-2, protein ST initiative; 1.70A {Haloarcula marismortui}
Probab=77.32 E-value=22 Score=27.16 Aligned_cols=89 Identities=15% Similarity=0.110 Sum_probs=54.2
Q ss_pred CCCCCHHHHHHHHHHhhhccCCchhhhHHHHHHHHHHHHhhhcCcccCChhhHhhHHHhhhcCC-CCCcccchHHHHHHH
Q 020039 195 PRTPNVDDILEKYCDYRSKKDGLVADSTGEIVKGLRCYFDKALPIMLLYKSEREQYEDSMAADV-SPSSVYGAEHLLRLF 273 (332)
Q Consensus 195 Pa~~tV~~IL~~Y~~~~~~~~~~~~~~~~E~~~Gl~~YFn~~L~~~LLY~~ER~QY~~ll~~~~-~pS~iYG~~HLLRLf 273 (332)
|..+|+.+.+++|+.+.. .+ .....+..-...|+.+++.+-.. +. .+++ -...++-+.+
T Consensus 4 ~~~~t~~~~~~~fl~~l~-~~-~s~~Ti~~Y~~~l~~f~~~l~~~-----------------~~~~l~~-it~~~i~~y~ 63 (117)
T 3nrw_A 4 RPSLSPREARDRYLAHRQ-TD-AADASIKSFRYRLKHFVEWAEER-----------------DITAMRE-LTGWKLDEYE 63 (117)
T ss_dssp CCCCCHHHHHHHHHHHHT-TT-SCHHHHHHHHHHHHHHHHHHHHT-----------------TCCSGGG-CCHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHH-cC-CCHHHHHHHHHHHHHHHHHHHHc-----------------CCCChHH-CCHHHHHHHH
Confidence 667899999999999886 22 22223333444455544432100 00 1111 1334555555
Q ss_pred hhhhHhhhcCCCCHHHHHHHHHHHHHHHHHHHHc
Q 020039 274 VKLPELLVHAKIEEETLTLLQHKLVDLLKFLQKH 307 (332)
Q Consensus 274 vkLP~lL~~t~~d~~s~~~l~~~l~~fL~fL~~n 307 (332)
..| ....+.+.+++.....|..|++|+.+.
T Consensus 64 ~~l----~~~~~s~~Ti~~~ls~lr~f~~~l~~~ 93 (117)
T 3nrw_A 64 TFR----RGSDVSPATLNGEMQTLKNWLEYLARI 93 (117)
T ss_dssp HHH----HTSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHH----HhCCCCHHHHHHHHHHHHHHHHHHHHc
Confidence 443 225688899999999999999999875
No 98
>2eqk_A Tudor domain-containing protein 4; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=75.01 E-value=6.4 Score=30.35 Aligned_cols=55 Identities=13% Similarity=0.071 Sum_probs=38.9
Q ss_pred CCCcCCCCEEEEEe--CCeeeeeEEEEEEeeCCeeEEEEEEcCCCCCccceeccccccccCh
Q 020039 49 SCPYQVNEKVLAFF--QSHVYEAKVIQVQYRLKEWTFRVHYLGWNKSWDEWVGVHRLMKDTE 108 (332)
Q Consensus 49 ~~~f~vge~vl~~~--~~~~YeAkIl~~~~~~~~~~Y~VHY~GWn~r~DEWV~~~ri~k~t~ 108 (332)
.+..++|+.|-|.. ++.||-|+|+++...+. --|-|..+.. -+-|+.++|+...+
T Consensus 19 ~~~~k~g~~vaak~~d~n~WyRakV~~v~~~~~---veVl~~DyGn--~~~V~~~~LR~L~~ 75 (85)
T 2eqk_A 19 PVKWENDMHCAVKIQDKNQWRRGQIIRMVTDTL---VEVLLYDVGV--ELVVNVDCLRKLEE 75 (85)
T ss_dssp CCCCCSSCEEEEECSSSCCEEEEEEEEECSSSE---EEEECTTTCC--EEEEETTTEEECCH
T ss_pred ccCccCCCEEEEEeCCCCeEEEEEEEEecCCCe---EEEEEEccCC--EEEEEccccccCCH
Confidence 45688999998874 56999999999977543 2333333332 27888899887654
No 99
>3dlm_A Histone-lysine N-methyltransferase setdb1; setdb1_human, structural genomics, structural genomics consortium, SGC, alternative splicing; 1.77A {Homo sapiens}
Probab=73.84 E-value=5.8 Score=35.57 Aligned_cols=51 Identities=10% Similarity=0.087 Sum_probs=40.5
Q ss_pred CcCCCCEEEEEeC-CeeeeeEEEEEEeeCCeeEEEEEEcCCCCCccceecccccc
Q 020039 51 PYQVNEKVLAFFQ-SHVYEAKVIQVQYRLKEWTFRVHYLGWNKSWDEWVGVHRLM 104 (332)
Q Consensus 51 ~f~vge~vl~~~~-~~~YeAkIl~~~~~~~~~~Y~VHY~GWn~r~DEWV~~~ri~ 104 (332)
.++||.+|+..+. +.||.++|++|....++.+|.|-|..=. +.-|+..+|-
T Consensus 8 ~l~Vg~~vlg~k~~~~W~rg~v~~I~~~~~g~~YkVkF~~~g---~~ivs~~hiA 59 (213)
T 3dlm_A 8 DLIVSMRILGKKRTKTWHKGTLIAIQTVGPGKKYKVKFDNKG---KSLLSGNHIA 59 (213)
T ss_dssp TEETTCEEEEECTTSBEEEEEEEEEEEETTEEEEEEEESSSC---EEEECGGGEE
T ss_pred cEEEccEEEEEecCCcEEEEEEEEEEECCCCeEEEEEEcCCC---CEEeecceEE
Confidence 4789999999986 6899999999999888899999998422 2456655553
No 100
>3h8z_A FragIle X mental retardation syndrome-related Pro; tudor domains, FXR2, structura genomics, structural genomics consortium, SGC; 1.92A {Homo sapiens} PDB: 3o8v_A 3kuf_A 2bkd_N*
Probab=73.32 E-value=7 Score=32.30 Aligned_cols=46 Identities=11% Similarity=0.102 Sum_probs=32.4
Q ss_pred CCCEEEEEe-CCeeeeeEEEEEEeeCCeeEEEEEEcC-CCCCccceeccccccc
Q 020039 54 VNEKVLAFF-QSHVYEAKVIQVQYRLKEWTFRVHYLG-WNKSWDEWVGVHRLMK 105 (332)
Q Consensus 54 vge~vl~~~-~~~~YeAkIl~~~~~~~~~~Y~VHY~G-Wn~r~DEWV~~~ri~k 105 (332)
.+..|-+.. .|.||+|.|.++.. ..++|+|.+ |.. .++|+.+.|+-
T Consensus 4 ~~~~VEV~~~~G~~y~a~V~~v~~----d~~~V~f~n~w~~--~~~vp~~~vRl 51 (128)
T 3h8z_A 4 QGLPVEVRGSNGAFYKGFVKDVHE----DSVTIFFENNWQS--ERQIPFGDVRL 51 (128)
T ss_dssp TTCEEEEECTTSCEEEEEEEEECS----SEEEEEETTCTTC--CEEEEGGGEEC
T ss_pred cccEEEEecCCCCEEEEEEEEEeC----CcEEEEEccccCc--ceEechhhEEc
Confidence 455665554 48999999998743 369999964 442 57888876654
No 101
>1ssf_A Transformation related protein 53 binding protein 1; tudor domains, tandem, SH3-like fold, beta barrel, alpha- helix, cell cycle; NMR {Mus musculus} SCOP: b.34.9.1 b.34.9.1
Probab=72.05 E-value=2.6 Score=35.96 Aligned_cols=37 Identities=19% Similarity=0.275 Sum_probs=28.7
Q ss_pred CCCCEEEEEeCC--eeeeeEEEEEEeeCCeeEEEEEEc-CCCC
Q 020039 53 QVNEKVLAFFQS--HVYEAKVIQVQYRLKEWTFRVHYL-GWNK 92 (332)
Q Consensus 53 ~vge~vl~~~~~--~~YeAkIl~~~~~~~~~~Y~VHY~-GWn~ 92 (332)
.+|++|++.|.. -+|.++|..... ..+|.|.|. |..+
T Consensus 10 ~iG~rVfArWsd~~yyYpG~V~~~~~---~~~Y~V~FdDG~~k 49 (156)
T 1ssf_A 10 FVGLRVVAKWSSNGYFYSGKITRDVG---AGKYKLLFDDGYEC 49 (156)
T ss_dssp STTCEEEECSSCSSEEEEEEEEECCT---TTEEEEECTTSCEE
T ss_pred hhccEEEEEcCCCCcccccEEEEecc---CCEEEEEEcCCCee
Confidence 699999999974 577999998643 347999984 6655
No 102
>3db3_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, tandem tudor domains, LI metal binding, DNA replication; HET: M3L; 2.40A {Homo sapiens} PDB: 3db4_A 2l3r_A*
Probab=66.82 E-value=12 Score=32.06 Aligned_cols=40 Identities=15% Similarity=0.219 Sum_probs=29.6
Q ss_pred CcCCCCEEEEEeC-------CeeeeeEEEEEEeeCCeeEEEEE-EcCC
Q 020039 51 PYQVNEKVLAFFQ-------SHVYEAKVIQVQYRLKEWTFRVH-YLGW 90 (332)
Q Consensus 51 ~f~vge~vl~~~~-------~~~YeAkIl~~~~~~~~~~Y~VH-Y~GW 90 (332)
.++||+.|++-|. |.||+|+|.+.+......+-+++ +.|=
T Consensus 92 ~L~vGqvVMvNYN~d~PkerGfWYDaeI~~~~~~rT~rEl~~~i~LG~ 139 (161)
T 3db3_A 92 DLEVGQVVMLNYNPDNPKERGFWYDAEISRKRETRTARELYANVVLGD 139 (161)
T ss_dssp GCCTTCEEEEEECSSSTTSCCEEEEEEEEEEEECSSCEEEEEEEECSS
T ss_pred HCCcCcEEEEecCCCCccccceeEEEEEeeehhhhhhheeEEEEEECC
Confidence 5899999999773 78999999998765544444444 4555
No 103
>1x3p_A Cpsrp43; chromo-2 domain, chloroplasts, LHCP, protein translocation, unknown function; NMR {Arabidopsis thaliana} SCOP: b.34.13.2
Probab=66.76 E-value=0.53 Score=33.14 Aligned_cols=32 Identities=16% Similarity=0.146 Sum_probs=24.3
Q ss_pred EEEEEEeeC-Cee-EEEEEEcCCCCCccceeccccc
Q 020039 70 KVIQVQYRL-KEW-TFRVHYLGWNKSWDEWVGVHRL 103 (332)
Q Consensus 70 kIl~~~~~~-~~~-~Y~VHY~GWn~r~DEWV~~~ri 103 (332)
+|++.+..+ |.. .|+|+..|| .-+-|-|++.|
T Consensus 5 ~Ild~r~~~~g~~~~YlVKWkgy--~~~TWEp~~nL 38 (54)
T 1x3p_A 5 SVIGKRVGDDGKTIEYLVKWTDM--SDATWEPQDNV 38 (54)
T ss_dssp CCCCBSSCSSSCCCCBCCCCSSS--SSCSCSTTCCS
T ss_pred EEEEEEEcCCCcEEEEEEEECCC--CcCCccchHHC
Confidence 345545544 666 899999999 56899999886
No 104
>2fhd_A RAD9 homolog, DNA repair protein RHP9/CRB2; tamdem tudor domains, cell cycle; HET: DNA MSE PO4; 2.40A {Schizosaccharomyces pombe}
Probab=64.00 E-value=11 Score=32.05 Aligned_cols=38 Identities=21% Similarity=0.382 Sum_probs=31.1
Q ss_pred CCEEEEEeCC---eeeeeEEEEEEee--CCeeEEEEEEcCCCC
Q 020039 55 NEKVLAFFQS---HVYEAKVIQVQYR--LKEWTFRVHYLGWNK 92 (332)
Q Consensus 55 ge~vl~~~~~---~~YeAkIl~~~~~--~~~~~Y~VHY~GWn~ 92 (332)
-.+|+++|.| -.|+|.|+..... .+...|+|+|..=+.
T Consensus 9 ~NrVfAff~G~p~~YYPATcvg~~~~~~~~~~~y~VrFdDs~~ 51 (153)
T 2fhd_A 9 KNRVLAFFKGYPSFYYPATLVAPVHSAVTSSIMYKVQFDDATM 51 (153)
T ss_dssp GGEEEEECCSSSCCEEEEEEEEEECCSSCCBCEEEEEETTSCE
T ss_pred cceEEEEcCCCcccccceEEEccCCCcccCCeEEEEEEcCCCC
Confidence 4679999976 6899999998865 577899999986554
No 105
>2b2y_A CHD-1, chromodomain-helicase-DNA-binding protein 1; three stranded antiparallel beta sheet, alpha helix linker, peptide binding protein; 2.35A {Homo sapiens} SCOP: b.34.13.2 b.34.13.2 PDB: 2b2u_A* 2b2v_A* 2b2w_A 2b2t_A*
Probab=63.54 E-value=2.1 Score=37.57 Aligned_cols=31 Identities=16% Similarity=0.446 Sum_probs=26.5
Q ss_pred EeeCCeeEEEEEEcCCCCCccceeccccccc
Q 020039 75 QYRLKEWTFRVHYLGWNKSWDEWVGVHRLMK 105 (332)
Q Consensus 75 ~~~~~~~~Y~VHY~GWn~r~DEWV~~~ri~k 105 (332)
+..++...|||.+.||+..++.|+++..|..
T Consensus 52 r~~~~~~eYlVKWkg~s~~h~tWe~~~~L~~ 82 (187)
T 2b2y_A 52 NKEPGEIQYLIKWKGWSHIHNTWETEETLKQ 82 (187)
T ss_dssp CCSCCEEEEEEEETTSCGGGCEEECHHHHHH
T ss_pred cccCCcEEEEEEECCCCcccCeeCCHHHhCc
Confidence 3456778999999999999999999987754
No 106
>3mwy_W Chromo domain-containing protein 1; SWI2/SNF2 ATPase, double chromodomains, hydrolase; HET: ATG; 3.70A {Saccharomyces cerevisiae}
Probab=62.51 E-value=2.8 Score=44.07 Aligned_cols=27 Identities=7% Similarity=0.266 Sum_probs=23.9
Q ss_pred CCeeEEEEEEcCCCCCccceecccccc
Q 020039 78 LKEWTFRVHYLGWNKSWDEWVGVHRLM 104 (332)
Q Consensus 78 ~~~~~Y~VHY~GWn~r~DEWV~~~ri~ 104 (332)
++..+|||-|+||+..++.|++++.|.
T Consensus 69 ~~~~eylvKWkg~s~~hntWe~~e~L~ 95 (800)
T 3mwy_W 69 KENYEFLIKWTDESHLHNTWETYESIG 95 (800)
T ss_dssp HHHCEEEEECSSSCTTSCEEECHHHHC
T ss_pred cCceEEEEEeCCcceeeccccCHHHHh
Confidence 456799999999999999999998764
No 107
>2b2y_C CHD-1, chromodomain-helicase-DNA-binding protein 1; three stranded antiparallel beta sheet, alpha helix linker, peptide binding protein; 2.35A {Homo sapiens} SCOP: b.34.13.2 PDB: 2b2u_C* 2b2v_C* 2b2t_C* 2b2w_C
Probab=57.92 E-value=1.5 Score=35.71 Aligned_cols=33 Identities=15% Similarity=0.414 Sum_probs=28.1
Q ss_pred EEEEeeCCeeEEEEEEcCCCCCccceecccccc
Q 020039 72 IQVQYRLKEWTFRVHYLGWNKSWDEWVGVHRLM 104 (332)
Q Consensus 72 l~~~~~~~~~~Y~VHY~GWn~r~DEWV~~~ri~ 104 (332)
++-+..+|...|+|-+.||+...+-|-|+..|.
T Consensus 49 ldkR~~~g~~eYlVKWkG~s~~~nTWEp~enL~ 81 (115)
T 2b2y_C 49 FEKNKEPGEIQYLIKWKGWSHIHNTWETEETLK 81 (115)
T ss_dssp CCTTSSSCEEEEEEEETTSCGGGCEEECHHHHH
T ss_pred cccceeCCcEEEEEEECCCCchhcccCCHHHcC
Confidence 555556788999999999999999999997764
No 108
>2a7y_A Hypothetical protein RV2302/MT2359; anti-parallel beta sheet, structural genomics, PSI, protein structure initiative; NMR {Mycobacterium tuberculosis} SCOP: b.34.6.3
Probab=55.26 E-value=8.6 Score=29.44 Aligned_cols=47 Identities=15% Similarity=0.085 Sum_probs=35.6
Q ss_pred CcCCCCEEEEEeC---CeeeeeEEEEEEeeCCeeEEEEEEcCCCCCccceec
Q 020039 51 PYQVNEKVLAFFQ---SHVYEAKVIQVQYRLKEWTFRVHYLGWNKSWDEWVG 99 (332)
Q Consensus 51 ~f~vge~vl~~~~---~~~YeAkIl~~~~~~~~~~Y~VHY~GWn~r~DEWV~ 99 (332)
.-.+|+++++.-. ..-..++|+++.-.+|.+-|.|+| |..-+.-+|-
T Consensus 5 ~A~vGDrlvv~g~~vg~~~R~GeIvEV~g~dG~PPY~VRw--~ddGHe~lv~ 54 (83)
T 2a7y_A 5 HAKVGDYLVVKGTTTERHDQHAEIIEVRSADGSPPYVVRW--LVNGHETTVY 54 (83)
T ss_dssp CCCTTEEEEESCTTTSCCEEEEEEEECSCSSSCSCEEEEE--TTTTEEEEEC
T ss_pred CccCCCEEEEecCcCCCCCcEEEEEEEECCCCCCCEEEEe--cCCCcEEEEe
Confidence 3468998887653 357899999999999999999998 3444445553
No 109
>2ee4_A RHO GTPase activating protein 5 variant; all alpha protein, GTPase-activating protein for RHO family members, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2ee5_A
Probab=55.17 E-value=58 Score=28.03 Aligned_cols=140 Identities=14% Similarity=0.217 Sum_probs=73.1
Q ss_pred eCChhHHHHHHHHhHhhhhC----CceecCCCCCC-HHHHHHHHHHhhhccCCchhhhHHHHHHHHHHHHhhhcCcccC-
Q 020039 169 QIPPPLKKQLVDDCEFITHL----GKLVKLPRTPN-VDDILEKYCDYRSKKDGLVADSTGEIVKGLRCYFDKALPIMLL- 242 (332)
Q Consensus 169 ~iP~~Lk~iLvdD~e~Itk~----~kL~~LPa~~t-V~~IL~~Y~~~~~~~~~~~~~~~~E~~~Gl~~YFn~~L~~~LL- 242 (332)
.+|..+..++. .|.+. --|+++|...+ |.++.+.|-+............+..++.-|+.||... +.-|+
T Consensus 26 ~vP~iv~~~i~----~l~~~gl~~eGIfR~~g~~~~i~~l~~~~~~~~~~~~~~~~~d~~~va~lLK~flreL-PePLi~ 100 (209)
T 2ee4_A 26 PIPLFVEKCVE----FIEDTGLCTEGLYRVSGNKTDQDNIQKQFDQDHNINLVSMEVTVNAVAGALKAFFADL-PDPLIP 100 (209)
T ss_dssp CSCHHHHHHHH----HHHHTCSCCTTTTTSCCCHHHHHHHHHHHHHCTTCCHHHHTCCHHHHHHHHHHHHHHS-SSCSSC
T ss_pred CCChHHHHHHH----HHHHhCCCCCCccccCCCHHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHHHHHhC-CCccCC
Confidence 58877766542 23222 24788887654 4555555543211100000113445666677888764 43333
Q ss_pred Ch--------------hhHhh-HHHhhhcCCCCCcccchHHHHHHHhhhhHhhhcCCCCHHHHHHHHH------------
Q 020039 243 YK--------------SEREQ-YEDSMAADVSPSSVYGAEHLLRLFVKLPELLVHAKIEEETLTLLQH------------ 295 (332)
Q Consensus 243 Y~--------------~ER~Q-Y~~ll~~~~~pS~iYG~~HLLRLfvkLP~lL~~t~~d~~s~~~l~~------------ 295 (332)
|. .||.+ ...++ ...++....=..+|+++|.++-.--....|+...+..+..
T Consensus 101 ~~l~~~~~~~~~~~~~~~~~~~l~~ll-~~LP~~n~~~L~~L~~~L~~V~~~~~~NkM~~~NLaivf~P~L~~~~~~~~~ 179 (209)
T 2ee4_A 101 YSLHPELLEAAKIPDKTERLHALKEIV-KKFHPVNYDVFRYVITHLNRVSQQHKINLMTADNLSICFWPTLMRPDFENRE 179 (209)
T ss_dssp TTTHHHHHHHHSCSSHHHHHHHHHHHT-TTSCTTHHHHHHHHHHHHHHHHHTHHHHCCCHHHHHHHHHHHHSCCCCCSSC
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHH-HHCCHHHHHHHHHHHHHHHHHHhcccccCCCHHHHHHHhcccccCCCCccHH
Confidence 21 12211 11122 2334444445566777776665443445677766654221
Q ss_pred ------HHHHHHHHHHHchhccccc
Q 020039 296 ------KLVDLLKFLQKHQSTFFLS 314 (332)
Q Consensus 296 ------~l~~fL~fL~~n~~~~F~~ 314 (332)
....++++|-.|.+.+|.+
T Consensus 180 ~l~~~~~~~~vve~LI~~~~~iF~~ 204 (209)
T 2ee4_A 180 FLSTTKIHQSVVETFIQQCQFFFYN 204 (209)
T ss_dssp CSCCCTTHHHHHHHHHHTHHHHTTC
T ss_pred HHHHhHHHHHHHHHHHHhhHHHcCC
Confidence 2467899999999999973
No 110
>2epb_A Chromodomain-helicase-DNA-binding protein 6; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=53.12 E-value=19 Score=26.12 Aligned_cols=24 Identities=8% Similarity=0.068 Sum_probs=22.1
Q ss_pred eeEEEEEEcCCCCCccceeccccc
Q 020039 80 EWTFRVHYLGWNKSWDEWVGVHRL 103 (332)
Q Consensus 80 ~~~Y~VHY~GWn~r~DEWV~~~ri 103 (332)
...|||.+.|+...-.-|-+++.|
T Consensus 32 ~~eYLVKWkgl~y~e~TWE~~~~l 55 (68)
T 2epb_A 32 VTHYLVKWCSLPYEESTWELEEDV 55 (68)
T ss_dssp EEEEEEECTTSCGGGCCEEETTTS
T ss_pred ceEEEEEEcCCChhcCccccchhc
Confidence 679999999999999999999887
No 111
>2h1e_A Chromo domain protein 1; CHD1, tandem chromodomains, three-stranded ANT B-sheet, hydrolase; 2.20A {Saccharomyces cerevisiae} PDB: 2dy7_A 2dy8_A
Probab=52.06 E-value=4.1 Score=35.31 Aligned_cols=26 Identities=8% Similarity=0.307 Sum_probs=23.3
Q ss_pred eeEEEEEEcCCCCCccceeccccccc
Q 020039 80 EWTFRVHYLGWNKSWDEWVGVHRLMK 105 (332)
Q Consensus 80 ~~~Y~VHY~GWn~r~DEWV~~~ri~k 105 (332)
..+|||-|.||+..++.|+++..|..
T Consensus 46 ~~EYlVKWKg~Sy~HnTWe~ee~L~~ 71 (177)
T 2h1e_A 46 NYEFLIKWTDESHLHNTWETYESIGQ 71 (177)
T ss_dssp HEEEEEEETTSCGGGCEEECHHHHCS
T ss_pred ceEEEEEECCCccccCeecCHHHHhh
Confidence 46999999999999999999987753
No 112
>2kkp_A Phage integrase; SAM-like domain, alpha-helical bundle, structural genomics, PSI-2, protein structure initiative; NMR {Moorella thermoacetica atcc 39073}
Probab=51.55 E-value=69 Score=23.50 Aligned_cols=89 Identities=15% Similarity=0.150 Sum_probs=50.7
Q ss_pred CCCCCHHHHHHHHHHhhhccCCchhhhHHHHHHHHHHHHhhhcCcccCChhhHhhHHHhhhcCCCCCcccchHHHHHHHh
Q 020039 195 PRTPNVDDILEKYCDYRSKKDGLVADSTGEIVKGLRCYFDKALPIMLLYKSEREQYEDSMAADVSPSSVYGAEHLLRLFV 274 (332)
Q Consensus 195 Pa~~tV~~IL~~Y~~~~~~~~~~~~~~~~E~~~Gl~~YFn~~L~~~LLY~~ER~QY~~ll~~~~~pS~iYG~~HLLRLfv 274 (332)
|...|+.+++++|++...... .....+......+..+|...+|...|-.. ...++.+++.
T Consensus 4 ~~~~t~~~~~~~~l~~~~~~~-~~~~T~~~y~~~~~~~i~~~~g~~~l~~I-------------------t~~~i~~~~~ 63 (117)
T 2kkp_A 4 PSKITVEQWLNRWLTDYAKPH-LRQSTWESYETVLRLHVIPTLGSIPLKKL-------------------QPADIQRLYA 63 (117)
T ss_dssp SCCSCHHHHHHHHHHHHTSCC-CSCCCCSHHHHHHHHHHCCCCCTSCTTTC-------------------CHHHHHHHHH
T ss_pred CCcCcHHHHHHHHHHHHhccC-CCccHHHHHHHHHHHHhccccCceEHHHC-------------------CHHHHHHHHH
Confidence 667899999999998742111 00001111122334444444443322222 2345555554
Q ss_pred hhhHhhhcCCCCHHHHHHHHHHHHHHHHHHHHc
Q 020039 275 KLPELLVHAKIEEETLTLLQHKLVDLLKFLQKH 307 (332)
Q Consensus 275 kLP~lL~~t~~d~~s~~~l~~~l~~fL~fL~~n 307 (332)
.|- ...+...+++.....+..|++|..++
T Consensus 64 ~l~----~~~~s~~t~~~~~~~l~~~~~~A~~~ 92 (117)
T 2kkp_A 64 SKL----ESGLSPTRVRYIHVVLHEAMSQARES 92 (117)
T ss_dssp HHH----HTTCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHH----HcCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 432 23467888999999999999998764
No 113
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=50.59 E-value=29 Score=31.26 Aligned_cols=28 Identities=14% Similarity=0.271 Sum_probs=24.7
Q ss_pred CcCCCCEEEEEe-------CCeeeeeEEEEEEeeC
Q 020039 51 PYQVNEKVLAFF-------QSHVYEAKVIQVQYRL 78 (332)
Q Consensus 51 ~f~vge~vl~~~-------~~~~YeAkIl~~~~~~ 78 (332)
.+++|..|++.+ .|.||.|+|+.++..+
T Consensus 75 ~l~~g~~vm~nyn~~~~~~~G~~y~~~I~~~~~~r 109 (226)
T 3ask_A 75 DLEVGQVVMLNYNPDNPKERGFWYDAEISRKRETR 109 (226)
T ss_dssp GCCTTCEEEEEECTTSTTSCCEEEEEEEEEEEECS
T ss_pred ccccCcEEEEecccCCccccCceeehhhhhhhhcc
Confidence 578999999998 5899999999998764
No 114
>2kd1_A DNA integration/recombination/invertion protein; protein structure initiative, structural genomics, unknown function, PSI-2; HET: DNA; NMR {Bacillus cereus atcc 14579}
Probab=50.44 E-value=66 Score=23.78 Aligned_cols=88 Identities=13% Similarity=0.104 Sum_probs=49.4
Q ss_pred CCCCCHHHHHHHHHHhhhccCCchhhhHHHHHHHHHHHHhhhcCcccCChhhHhhHHHhhhcCCCCCcccchHHHHHHHh
Q 020039 195 PRTPNVDDILEKYCDYRSKKDGLVADSTGEIVKGLRCYFDKALPIMLLYKSEREQYEDSMAADVSPSSVYGAEHLLRLFV 274 (332)
Q Consensus 195 Pa~~tV~~IL~~Y~~~~~~~~~~~~~~~~E~~~Gl~~YFn~~L~~~LLY~~ER~QY~~ll~~~~~pS~iYG~~HLLRLfv 274 (332)
|..+|+.+++++|++...... ....+......+..||...+|...|-.. ...++.+++.
T Consensus 3 ~~~~t~~~~~~~~~~~~~~~~--~~~T~~~y~~~l~~~i~~~~g~~~l~~i-------------------t~~~i~~~~~ 61 (118)
T 2kd1_A 3 PSKLSYGEYLESWFNTKRHSV--GIQTAKVLKGYLNSRIIPSLGNIKLAKL-------------------TSLHMQNYVN 61 (118)
T ss_dssp CSCSBHHHHHHHHHHHHHHHH--CHHHHHHHHHHHTTTHHHHTTSSBGGGC-------------------CHHHHHHHHH
T ss_pred cccccHHHHHHHHHHHHHhcc--CHHHHHHHHHHHHHhhhHhhCcCCHHhC-------------------CHHHHHHHHH
Confidence 456899999999998653110 0111111222233333333443222211 2345555554
Q ss_pred hhhHhhhcCCCCHHHHHHHHHHHHHHHHHHHHc
Q 020039 275 KLPELLVHAKIEEETLTLLQHKLVDLLKFLQKH 307 (332)
Q Consensus 275 kLP~lL~~t~~d~~s~~~l~~~l~~fL~fL~~n 307 (332)
.|- ...+...+++.+...|..|++|..++
T Consensus 62 ~l~----~~g~s~~t~~~~~~~l~~~~~~a~~~ 90 (118)
T 2kd1_A 62 SLR----DEGLKRGTIEKIIKVIRNSLEHAIDL 90 (118)
T ss_dssp HHH----HHTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHH----HcCCCHHHHHHHHHHHHHHHHHHHHc
Confidence 432 13467788999999999999999865
No 115
>1pbw_A Rhogap domain, phosphatidylinositol 3-kinase; phosphotransferase, tpase activating protein, CDC42, phosphoinositide 3-kinase, SH3 domain; 2.00A {Homo sapiens} SCOP: a.116.1.1
Probab=44.48 E-value=1.5e+02 Score=25.46 Aligned_cols=143 Identities=15% Similarity=0.165 Sum_probs=69.9
Q ss_pred eCChhHHHHHHHH-hHhhhhCCceecCCCCCCHHHHHHHHHHhhhccCCchhhhHHHHHHHHHHHHhhhcCcccCChh--
Q 020039 169 QIPPPLKKQLVDD-CEFITHLGKLVKLPRTPNVDDILEKYCDYRSKKDGLVADSTGEIVKGLRCYFDKALPIMLLYKS-- 245 (332)
Q Consensus 169 ~iP~~Lk~iLvdD-~e~Itk~~kL~~LPa~~tV~~IL~~Y~~~~~~~~~~~~~~~~E~~~Gl~~YFn~~L~~~LLY~~-- 245 (332)
.+|..+..++..= ..-+.. --|+++|...+. +-|.+-.+.-....+-....+..++.-|+.||.. |+--|+-..
T Consensus 24 ~vP~iv~~~i~~l~~~gl~~-eGIfR~sG~~~~-~~l~~~~d~~~~~~~~~~~dv~~va~lLK~flRe-LPePLl~~~ly 100 (216)
T 1pbw_A 24 IAPPLLIKLVEAIEKKGLEC-STLYRTQSSSNL-AELRQLLDCDTPSVDLEMIDVHVLADAFKRYLLD-LPNPVIPAAVY 100 (216)
T ss_dssp CSCHHHHHHHHHHHHHHTTC-TTTTSSCCSCCT-THHHHHSCSSSSCCCGGGBCHHHHHHHHHHHHHT-SSSCSSCHHHH
T ss_pred CcCHHHHHHHHHHHHcCCCC-CCeeeCCChHHH-HHHHHHHHcCCCCCCccccCHHHHHHHHHHHHHh-CCCCCCCHHHH
Confidence 4787776653210 012322 348899988777 5554443321111111122455566667777765 444443221
Q ss_pred --------------hHhh-HHHhhhc-CCCCCcccchHHHHHHHhhhhHhhhcCCCCHHHHHHHH---------------
Q 020039 246 --------------EREQ-YEDSMAA-DVSPSSVYGAEHLLRLFVKLPELLVHAKIEEETLTLLQ--------------- 294 (332)
Q Consensus 246 --------------ER~Q-Y~~ll~~-~~~pS~iYG~~HLLRLfvkLP~lL~~t~~d~~s~~~l~--------------- 294 (332)
||.+ ...++.. ..++....=+.+|+++|.++-.-=....|+...+.++.
T Consensus 101 ~~~~~~~~~~~~~~~~~~~l~~ll~~~~LP~~n~~~L~~L~~~L~~V~~~~~~NkM~~~NLAivf~P~Ll~~~~~~~~~~ 180 (216)
T 1pbw_A 101 SEMISLAPEVQSSEEYIQLLKKLIRSPSIPHQYWLTLQYLLKHFFKLSQTSSKNLLNARVLSEIFSPMLFRFSAASSDNT 180 (216)
T ss_dssp HHHHHHGGGCCSHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHHHHHHTHHHHCCCHHHHHHHHHHHHHTCSSCCHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHhcccccCCCHHHHHHHHhhhcCCCCCCchhhh
Confidence 1111 1112210 33444444455666666665544334556665554322
Q ss_pred HHHHHHHHHHHHchhccccc
Q 020039 295 HKLVDLLKFLQKHQSTFFLS 314 (332)
Q Consensus 295 ~~l~~fL~fL~~n~~~~F~~ 314 (332)
.....++++|-+|.+..|..
T Consensus 181 ~~~~~vve~LI~~~~~iF~~ 200 (216)
T 1pbw_A 181 ENLIKVIEILISTEWNERQP 200 (216)
T ss_dssp HHHHHHHHHHHHTTC-----
T ss_pred HHHHHHHHHHHhhhHHhcCC
Confidence 56788999999999999984
No 116
>3h6z_A Polycomb protein SFMBT; MBT, MBR repeat, aromatic CAGE, chromatin regulator, DNA-BIN metal-binding, nucleus, repressor, transcription; HET: MLZ SUC; 2.80A {Drosophila melanogaster}
Probab=41.03 E-value=44 Score=33.04 Aligned_cols=48 Identities=13% Similarity=0.129 Sum_probs=38.5
Q ss_pred CcCCCCEEEEEeC---CeeeeeEEEEEEeeCCeeEEEEEEcCCCCCccceeccc--ccc
Q 020039 51 PYQVNEKVLAFFQ---SHVYEAKVIQVQYRLKEWTFRVHYLGWNKSWDEWVGVH--RLM 104 (332)
Q Consensus 51 ~f~vge~vl~~~~---~~~YeAkIl~~~~~~~~~~Y~VHY~GWn~r~DEWV~~~--ri~ 104 (332)
.|++|.+|.+.+. ..+..|.|.++... .|+|||.|- ..|-|+..+ +|+
T Consensus 156 ~F~~GmkLE~vD~~~~~~i~vAtV~~v~g~----rl~l~~~d~--~~dfwc~~~Sp~I~ 208 (447)
T 3h6z_A 156 RFRLGLNLECVDKDRISQVRLATVTKIVGD----RLFLRYFDS--DDGFWCHEDSPIIH 208 (447)
T ss_dssp SSCTTCEEEEECTTCTTEEEEEEEEEEETT----EEEEEETTC--SCEEEEETTCTTEE
T ss_pred ccCCCCEEEEEcCCCCccEEEEEEEEEECC----cEEEEEECC--CCCEEEeCCCCCcc
Confidence 6999999999985 47899999998754 799999664 678999764 444
No 117
>1tx4_A P50-rhogap; complex (GTPase activation/proto-oncogene), GTPase, transition state, GAP; HET: GDP; 1.65A {Homo sapiens} SCOP: a.116.1.1 PDB: 1am4_A* 1grn_B*
Probab=40.91 E-value=1.6e+02 Score=24.80 Aligned_cols=139 Identities=15% Similarity=0.169 Sum_probs=64.7
Q ss_pred eCChhHHHHHHHHh-HhhhhCCceecCCCCC-CHHHHHHHHHHhhhccCCchh-hhHHHHHHHHHHHHhhhcCcccCChh
Q 020039 169 QIPPPLKKQLVDDC-EFITHLGKLVKLPRTP-NVDDILEKYCDYRSKKDGLVA-DSTGEIVKGLRCYFDKALPIMLLYKS 245 (332)
Q Consensus 169 ~iP~~Lk~iLvdD~-e~Itk~~kL~~LPa~~-tV~~IL~~Y~~~~~~~~~~~~-~~~~E~~~Gl~~YFn~~L~~~LLY~~ 245 (332)
.+|..+..++..=. .-+.. --|+++|... .|.++.+.|-+.. .. +-.. ..+..++.-|+.||... +--|+-..
T Consensus 25 ~vP~iv~~~i~~l~~~gl~~-eGIfR~~g~~~~i~~l~~~~~~~~-~~-~~~~~~d~~~~a~lLK~flreL-pePLi~~~ 100 (198)
T 1tx4_A 25 PIPIVLRETVAYLQAHALTT-EGIFRRSANTQVVREVQQKYNMGL-PV-DFDQYNALHLPAVILKTFLREL-PEPLLTFD 100 (198)
T ss_dssp SSCHHHHHHHHHHHHHCTTC-TTTTTSCCCHHHHHHHHHHHHTTC-CC-CGGGSSCTHHHHHHHHHHHHHS-SSCTTCGG
T ss_pred CCCHHHHHHHHHHHHhCCCC-CCeeecCCcHHHHHHHHHHHhCCC-CC-CccccccchHHHHHHHHHHHHC-CCcCCCHH
Confidence 67877776652100 11222 3378888764 3445544443321 11 1111 12233455577777654 43333221
Q ss_pred hHhhHH---------------HhhhcCCCCCcccchHHHHHHHhhhhHhhhcCCCCHHHHHHH-----------------
Q 020039 246 EREQYE---------------DSMAADVSPSSVYGAEHLLRLFVKLPELLVHAKIEEETLTLL----------------- 293 (332)
Q Consensus 246 ER~QY~---------------~ll~~~~~pS~iYG~~HLLRLfvkLP~lL~~t~~d~~s~~~l----------------- 293 (332)
=-..+. .++ ...++....=..+|+++|.++-.-=....|+...+..+
T Consensus 101 l~~~~~~~~~~~~~~~~~~l~~ll-~~LP~~n~~~L~~L~~~L~~v~~~~~~NkM~~~nLa~vf~P~Ll~~~~~~~~~~~ 179 (198)
T 1tx4_A 101 LYPHVVGFLNIDESQRVPATLQVL-QTLPEENYQVLRFLTAFLVQISAHSDQNKMTNTNLAVVFGPNLLWAKDAAITLKA 179 (198)
T ss_dssp GHHHHHTGGGSCGGGHHHHHHHHH-TTSCHHHHHHHHHHHHHHHHHHHTHHHHCCCHHHHHHHHHHHHCCCSSHHHHHHT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHH-HHCCHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHhhhcccccCCCCccccHHH
Confidence 111111 111 12233333344556666655544333344555444321
Q ss_pred HHHHHHHHHHHHHchhccc
Q 020039 294 QHKLVDLLKFLQKHQSTFF 312 (332)
Q Consensus 294 ~~~l~~fL~fL~~n~~~~F 312 (332)
...+..|++||-+|.+..|
T Consensus 180 ~~~~~~~v~~LI~~~~~iF 198 (198)
T 1tx4_A 180 INPINTFTKFLLDHQGELF 198 (198)
T ss_dssp HHHHHHHHHHHHHTHHHHC
T ss_pred HHHHHHHHHHHHHhHHHhC
Confidence 1346788899998888776
No 118
>3feo_A MBT domain-containing protein 1; MBTL1, structural genomics, structural genomics consortium, metal-binding, nucleus, zinc-finger; 2.50A {Homo sapiens}
Probab=38.60 E-value=97 Score=30.41 Aligned_cols=45 Identities=16% Similarity=0.005 Sum_probs=34.1
Q ss_pred CcCCCCEEEEEeC---CeeeeeEEEEEEeeCCeeEEEEEEcCCCCCc--ccee
Q 020039 51 PYQVNEKVLAFFQ---SHVYEAKVIQVQYRLKEWTFRVHYLGWNKSW--DEWV 98 (332)
Q Consensus 51 ~f~vge~vl~~~~---~~~YeAkIl~~~~~~~~~~Y~VHY~GWn~r~--DEWV 98 (332)
.|++|-++.+.+. ..+.-|.|.+|... ....|||.||...- |-|.
T Consensus 254 ~F~~GMKLEavDp~~p~~icvATV~~v~~~---g~l~l~~Dg~~~~~~~d~~~ 303 (437)
T 3feo_A 254 WFKEGMKLEAIDPLNLSTICVATIRKVLAD---GFLMIGIDGSEAADGSDWFC 303 (437)
T ss_dssp CCCTTCEEEEEETTEEEEEEEEEEEEECGG---GEEEEEETTCCC-CCTTCEE
T ss_pred ccccCCEEEEEcCCCCceEEEEEEEEEccC---CEEEEEeCCCCCCCCCCeEE
Confidence 4999999999986 47888999988621 23569999997543 7776
No 119
>3fk2_A Glucocorticoid receptor DNA-binding factor 1; structural genomics consortium, GTPase-activating protein, SGC, alternative splicing, anti-oncogene; 2.80A {Homo sapiens}
Probab=38.40 E-value=2.1e+02 Score=25.22 Aligned_cols=141 Identities=8% Similarity=0.115 Sum_probs=66.3
Q ss_pred eCChhHHHHHHHH-hHhhhhCCceecCCCCCC-HHHHHHHHHHhhhccCCchhhhHHHHHHHHHHHHhhhcCcccCChhh
Q 020039 169 QIPPPLKKQLVDD-CEFITHLGKLVKLPRTPN-VDDILEKYCDYRSKKDGLVADSTGEIVKGLRCYFDKALPIMLLYKSE 246 (332)
Q Consensus 169 ~iP~~Lk~iLvdD-~e~Itk~~kL~~LPa~~t-V~~IL~~Y~~~~~~~~~~~~~~~~E~~~Gl~~YFn~~L~~~LLY~~E 246 (332)
.+|..+..++..= ..-+.. --|+++|...+ |.++.+.|-.............+..++.-|+.||... +.-|+-..
T Consensus 67 ~vP~iv~~~i~~l~~~gl~~-eGIFR~sG~~~~v~~L~~~~d~~~~~~~~~~~~dvh~va~lLK~fLReL-PePLl~~~- 143 (246)
T 3fk2_A 67 PIPIFIERCIEYIEATGLST-EGIYRVSGNKSEMESLQRQFDQDHNLDLAEKDFTVNTVAGAMKSFFSEL-PDPLVPYN- 143 (246)
T ss_dssp CSCHHHHHHHHHHHHHCTTS-TTTTTSCCCHHHHHHHHHHHHHCTTCCSGGGTCCHHHHHHHHHHHHHHS-SSCSSCHH-
T ss_pred CCChHHHHHHHHHHHhCCCC-CCeeEeCCcHHHHHHHHHHHhcCCCCCcccccCcHHHHHHHHHHHHHhC-CCccCCHH-
Confidence 6887776543220 011222 23788887644 4444444433221110111113455666677777764 44444211
Q ss_pred HhhHHHhhh------------------cCCCCCcccchHHHHHHHhhhhHhhhcCCCCHHHHHH----------------
Q 020039 247 REQYEDSMA------------------ADVSPSSVYGAEHLLRLFVKLPELLVHAKIEEETLTL---------------- 292 (332)
Q Consensus 247 R~QY~~ll~------------------~~~~pS~iYG~~HLLRLfvkLP~lL~~t~~d~~s~~~---------------- 292 (332)
.|..++. ...++....=+.+|+++|.++-.-=....|+...+.+
T Consensus 144 --l~~~~~~~~~~~~~~~~~~~l~~ll~~LP~~n~~~L~~L~~~L~~V~~~s~~NkMt~~NLAivf~P~Llrp~~~~~~~ 221 (246)
T 3fk2_A 144 --MQIDLVEAHKINDREQKLHALKEVLKKFPKENHEVFKYVISHLNKVSHNNKVNLMTSENLSICFWPTLMRPDFSTMDA 221 (246)
T ss_dssp --HHHHHHHHTTCCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHTTHHHHCCCHHHHHHHHHHHHHCCCSSSSCH
T ss_pred --HHHHHHHHhccCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhccCccCCchHHhHHHhcccccCCCCccHHH
Confidence 1333221 1123333333444555555443322223454444332
Q ss_pred --HHHHHHHHHHHHHHchhccccc
Q 020039 293 --LQHKLVDLLKFLQKHQSTFFLS 314 (332)
Q Consensus 293 --l~~~l~~fL~fL~~n~~~~F~~ 314 (332)
-...+..|+++|-+|.+.+|.+
T Consensus 222 ~~~~~~~~~ive~LI~~~~~iF~n 245 (246)
T 3fk2_A 222 LTATRTYQTIIELFIQQCPFFFYN 245 (246)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHhHHHhcCC
Confidence 1234668999999999998863
No 120
>1nz9_A Transcription antitermination protein NUSG; transcription elongation, riken structural genomics/proteomics initiative, RSGI; NMR {Thermus thermophilus} SCOP: b.34.5.4
Probab=36.02 E-value=43 Score=23.02 Aligned_cols=37 Identities=8% Similarity=0.110 Sum_probs=27.3
Q ss_pred CcCCCCEEEEEeCCe-eeeeEEEEEEeeCCeeEEEEEE
Q 020039 51 PYQVNEKVLAFFQSH-VYEAKVIQVQYRLKEWTFRVHY 87 (332)
Q Consensus 51 ~f~vge~vl~~~~~~-~YeAkIl~~~~~~~~~~Y~VHY 87 (332)
.|++|+.|.+..|+. -++|+|.++...++...-.|.-
T Consensus 4 ~~~~Gd~V~V~~Gpf~g~~g~v~~v~~~k~~v~V~v~~ 41 (58)
T 1nz9_A 4 AFREGDQVRVVSGPFADFTGTVTEINPERGKVKVMVTI 41 (58)
T ss_dssp SCCTTCEEEECSGGGTTCEEEEEEEETTTTEEEEEEES
T ss_pred ccCCCCEEEEeecCCCCcEEEEEEEcCCCCEEEEEEEe
Confidence 589999999999984 6899999997654433333333
No 121
>2g3r_A Tumor suppressor P53-binding protein 1; tandem tudor domains, cell cycle-transcription complex; 1.25A {Homo sapiens} SCOP: b.34.9.1 b.34.9.1 PDB: 2ig0_A* 3lgf_A* 3lgl_A* 3lh0_A* 1xni_A
Probab=35.58 E-value=61 Score=26.44 Aligned_cols=36 Identities=17% Similarity=0.284 Sum_probs=27.5
Q ss_pred CCCEEEEEeC--CeeeeeEEEEEEeeCCeeEEEEEEc-CCCC
Q 020039 54 VNEKVLAFFQ--SHVYEAKVIQVQYRLKEWTFRVHYL-GWNK 92 (332)
Q Consensus 54 vge~vl~~~~--~~~YeAkIl~~~~~~~~~~Y~VHY~-GWn~ 92 (332)
+|-+|++.|. +.+|.++|.+.... -+|.|-|. |-.+
T Consensus 7 ~G~rV~AkWsdn~~yYpG~V~~~~~~---~ky~V~FdDg~~~ 45 (123)
T 2g3r_A 7 VGLRVVAKWSSNGYFYSGKITRDVGA---GKYKLLFDDGYEC 45 (123)
T ss_dssp TTCEEEEECTTTCCEEEEEEEEEEET---TEEEEEETTSCEE
T ss_pred cceEEEEEeccCCcCcccEEEEeccC---CeEEEEEcCCCee
Confidence 7999999996 36999999886433 48999985 4433
No 122
>1ow3_A RHO-GTPase-activating protein 1; complex, GTPase, GAP, transition state, gene regulation/signaling protein complex; HET: GDP; 1.80A {Homo sapiens} SCOP: a.116.1.1 PDB: 1rgp_A 2ngr_B*
Probab=33.35 E-value=2.5e+02 Score=24.63 Aligned_cols=141 Identities=16% Similarity=0.178 Sum_probs=69.3
Q ss_pred EeCChhHHHHHHHH-hHhhhhCCceecCCCCC-CHHHHHHHHHHhhhccCCchh-hhHHHHHHHHHHHHhhhcCcccCCh
Q 020039 168 IQIPPPLKKQLVDD-CEFITHLGKLVKLPRTP-NVDDILEKYCDYRSKKDGLVA-DSTGEIVKGLRCYFDKALPIMLLYK 244 (332)
Q Consensus 168 I~iP~~Lk~iLvdD-~e~Itk~~kL~~LPa~~-tV~~IL~~Y~~~~~~~~~~~~-~~~~E~~~Gl~~YFn~~L~~~LLY~ 244 (332)
-.+|..+..++..= ..-+.. --|+++|... .|.++.+.|-+... . +-.. ..+..++.-|+.||... +.-|+-.
T Consensus 60 ~~vP~iv~~~i~~l~~~gl~~-eGIfR~sG~~~~i~~L~~~~d~~~~-~-~~~~~~dv~~va~lLK~flReL-PePLl~~ 135 (242)
T 1ow3_A 60 EPIPIVLRETVAYLQAHALTT-EGIFRRSANTQVVREVQQKYNMGLP-V-DFDQYNELHLPAVILKTFLREL-PEPLLTF 135 (242)
T ss_dssp CSSCHHHHHHHHHHHHHCTTC-TTTTTSCCCHHHHHHHHHHHHTTCC-C-CGGGSSCTHHHHHHHHHHHHHS-SSCTTCG
T ss_pred CCCCHHHHHHHHHHHHcCCCC-CceeeeCCcHHHHHHHHHHHhcCCC-C-CcccccchHHHHHHHHHHHHhC-CCCCCCH
Confidence 36888777665210 011222 2378888764 35555555433211 1 1111 12334455577777664 4334322
Q ss_pred h--------------hHhh-HHHhhhcCCCCCcccchHHHHHHHhhhhHhhhcCCCCHHHHHHH----------------
Q 020039 245 S--------------EREQ-YEDSMAADVSPSSVYGAEHLLRLFVKLPELLVHAKIEEETLTLL---------------- 293 (332)
Q Consensus 245 ~--------------ER~Q-Y~~ll~~~~~pS~iYG~~HLLRLfvkLP~lL~~t~~d~~s~~~l---------------- 293 (332)
. ||.+ ...++ ...++....=..+|+++|.++-.-=....|+...+..+
T Consensus 136 ~ly~~~~~~~~~~~~~~~~~l~~ll-~~LP~~n~~~L~~L~~~L~~V~~~s~~NkM~~~NLAivf~P~Ll~~~~~~~~~~ 214 (242)
T 1ow3_A 136 DLYPHVVGFLNIDESQRVPATLQVL-QTLPEENYQVLRFLTAFLVQISAHSDQNKMTNTNLAVVFGPNLLWAKDAAITLK 214 (242)
T ss_dssp GGHHHHHTGGGSCGGGHHHHHHHHH-TTSCHHHHHHHHHHHHHHHHHHHTHHHHCCCHHHHHHHHHHHHCCCSSHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHH-HHCCHHHHHHHHHHHHHHHHHHhccCcCCCCHHHhHHhhcchhCCCCCccccHH
Confidence 1 1111 11111 22244444445666666666554333455665544431
Q ss_pred -HHHHHHHHHHHHHchhcccc
Q 020039 294 -QHKLVDLLKFLQKHQSTFFL 313 (332)
Q Consensus 294 -~~~l~~fL~fL~~n~~~~F~ 313 (332)
+..+..|++||-+|.+.+|.
T Consensus 215 ~~~~~~~~v~~LI~~~~~iF~ 235 (242)
T 1ow3_A 215 AINPINTFTKFLLDHQGELFP 235 (242)
T ss_dssp THHHHHHHHHHHHHTHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHHcC
Confidence 13467899999999999997
No 123
>2fmm_A Chromobox protein homolog 1; ENT domain, chromo shadow domain, EMSY protein, heterochroma protein 1, transcription; 1.80A {Homo sapiens} SCOP: b.34.13.2 PDB: 1s4z_A
Probab=33.29 E-value=61 Score=23.83 Aligned_cols=33 Identities=12% Similarity=0.183 Sum_probs=26.2
Q ss_pred eEEEEEEeeCCeeEEEEEEcCCCCCccceeccccc
Q 020039 69 AKVIQVQYRLKEWTFRVHYLGWNKSWDEWVGVHRL 103 (332)
Q Consensus 69 AkIl~~~~~~~~~~Y~VHY~GWn~r~DEWV~~~ri 103 (332)
-+|+.....+|...|+|++.|-.. =+||+...+
T Consensus 19 ekI~g~~~~~Gel~fLvkWkg~d~--~dlVpa~~a 51 (74)
T 2fmm_A 19 ERIIGATDSSGELMFLMKWKNSDE--ADLVPAKEA 51 (74)
T ss_dssp EEEEEEEEETTEEEEEEEETTCSC--CEEEEHHHH
T ss_pred eEEEEEEcCCCcEEEEEEECCCCc--ccEEEHHHH
Confidence 467788888899999999999765 259987544
No 124
>3msx_B RHO GTPase-activating protein 20; protein-proten complex, transition state, protein BI; HET: GDP; 1.65A {Homo sapiens}
Probab=29.71 E-value=2.5e+02 Score=23.58 Aligned_cols=139 Identities=13% Similarity=0.127 Sum_probs=65.1
Q ss_pred CChhHHHHHHHH-hHhhhhCCceecCCCCC-CHHHHHHHHHHhhhccCCchhhhHHHHHHHHHHHHhhhcCcccCChhhH
Q 020039 170 IPPPLKKQLVDD-CEFITHLGKLVKLPRTP-NVDDILEKYCDYRSKKDGLVADSTGEIVKGLRCYFDKALPIMLLYKSER 247 (332)
Q Consensus 170 iP~~Lk~iLvdD-~e~Itk~~kL~~LPa~~-tV~~IL~~Y~~~~~~~~~~~~~~~~E~~~Gl~~YFn~~L~~~LLY~~ER 247 (332)
+|..+..++..= ..-+.. --|+++|... .|.++.+.|-..... .-....+..++.-|+.||.. |+.-|+-..=-
T Consensus 26 vP~~v~~~i~~l~~~gl~~-eGIfR~~g~~~~i~~l~~~~~~~~~~--~~~~~d~~~va~lLK~flre-Lp~pLl~~~l~ 101 (201)
T 3msx_B 26 LPKPVLDMLFFLNQKGPLT-KGIFRQSANVKSCRELKEKLNSGVEV--HLDCESIFVIASVLKDFLRN-IPGSIFSSDLY 101 (201)
T ss_dssp CCHHHHHHHHHHHHHGGGS-TTTTTSCCCHHHHHHHHHHHHHTCCC--CTTSSCHHHHHHHHHHHHHT-STTTTTTGGGH
T ss_pred CCHHHHHHHHHHHHhCCCC-CCeeeeCCCHHHHHHHHHHhccCCCC--CCCcccHHHHHHHHHHHHHh-CCCCCCCHHHH
Confidence 787776654210 011222 2378888754 344444444332111 11122345566667788765 44334322111
Q ss_pred hhHHHhhh---------------cCCCCCcccchHHHHHHHhhhhHhhhcCCCCHHH--------------------HHH
Q 020039 248 EQYEDSMA---------------ADVSPSSVYGAEHLLRLFVKLPELLVHAKIEEET--------------------LTL 292 (332)
Q Consensus 248 ~QY~~ll~---------------~~~~pS~iYG~~HLLRLfvkLP~lL~~t~~d~~s--------------------~~~ 292 (332)
..+.++.. ...+.....=..+|+++|.++-.--....|+... ...
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~ll~~LP~~n~~~L~~L~~~L~~v~~~~~~NkM~~~nLa~vf~P~ll~~~~~~~~~~~~~ 181 (201)
T 3msx_B 102 DHWVSVMDQGNDEEKINTVQRLLDQLPRANVVLLRYLFGVLHNIEQHSSSNQMTAFNLAVCVAPSILWPPASSSPELENE 181 (201)
T ss_dssp HHHHHGGGSSSHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHTTHHHHCCCHHHHHHHHHHHHCCCCTTSCHHHHHH
T ss_pred HHHHHHHccccHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhccccCCCChhhhhhhhhccccCCCCCCChHHHHH
Confidence 11111110 1223333333445555555543322222333322 233
Q ss_pred HHHHHHHHHHHHHHchhccc
Q 020039 293 LQHKLVDLLKFLQKHQSTFF 312 (332)
Q Consensus 293 l~~~l~~fL~fL~~n~~~~F 312 (332)
+...+..|++||-+|.+.+|
T Consensus 182 ~~~~~~~iv~~LI~~~~~IF 201 (201)
T 3msx_B 182 FTKKVSLLIQFLIENCLRIF 201 (201)
T ss_dssp HHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhhHhhC
Confidence 45667778999999998877
No 125
>3iug_A RHO/CDC42/RAC GTPase-activating protein RICS; structural genomics consortium (SGC), GAP, alternative splicing, cell junction, cell membrane; 1.77A {Homo sapiens}
Probab=29.30 E-value=2.8e+02 Score=23.95 Aligned_cols=145 Identities=14% Similarity=0.216 Sum_probs=69.8
Q ss_pred eCChhHHHHHHH--HhHhhhhCCceecCCCCC-CHHHHHHHHHHhhhccCCch--hhhHHHHHHHHHHHHhhhcCcccCC
Q 020039 169 QIPPPLKKQLVD--DCEFITHLGKLVKLPRTP-NVDDILEKYCDYRSKKDGLV--ADSTGEIVKGLRCYFDKALPIMLLY 243 (332)
Q Consensus 169 ~iP~~Lk~iLvd--D~e~Itk~~kL~~LPa~~-tV~~IL~~Y~~~~~~~~~~~--~~~~~E~~~Gl~~YFn~~L~~~LLY 243 (332)
.+|..+..++.. ..-+ + + -|+++|... .|.++.+.|-......-... ...+..++.-|+.||... +.-|+-
T Consensus 36 ~vP~iv~~~i~~i~~~gl-~-e-GIfR~~G~~~~i~~L~~~~~~~~~~~~~~~~~~~dvh~va~lLK~fLreL-PePLl~ 111 (229)
T 3iug_A 36 EVPQVLQSCTAFIERYGI-V-D-GIYRLSGVASNIQRLRHEFDSEHVPDLTKEPYVQDIHSVGSLCKLYFREL-PNPLLT 111 (229)
T ss_dssp SSCHHHHHHHHHHHHHCC-S-T-TTTTSCCCHHHHHHHHHHHHTTCCCCTTSTTTTTCHHHHHHHHHHHHHHC-SSCTTC
T ss_pred CCCHHHHHHHHHHHHcCC-C-C-CCeecCCcHHHHHHHHHHHhcCCCCCccccccccchHHHHHHHHHHHHHC-CCCCcC
Confidence 588887765322 1111 2 2 377888764 45555555543211110111 113455666677887764 333332
Q ss_pred hhhHhhHH----------------HhhhcCCCCCcccchHHHHHHHhhhhHhhhcCCCCHHHHHHH--------------
Q 020039 244 KSEREQYE----------------DSMAADVSPSSVYGAEHLLRLFVKLPELLVHAKIEEETLTLL-------------- 293 (332)
Q Consensus 244 ~~ER~QY~----------------~ll~~~~~pS~iYG~~HLLRLfvkLP~lL~~t~~d~~s~~~l-------------- 293 (332)
..--.++. .++ ...++....=+.+|+++|.++-.--....|+...+..+
T Consensus 112 ~~ly~~~~~~~~~~~~~~~~~~l~~ll-~~LP~~n~~~L~~L~~~L~~V~~~s~~NkM~~~NLAivf~P~Ll~~~~~~~~ 190 (229)
T 3iug_A 112 YQLYEKFSDAVSAATDEERLIKIHDVI-QQLPPPHYRTLEFLMRHLSLLADYCSITNMHAKNLAIVWAPNLLRSKQIESA 190 (229)
T ss_dssp TTTHHHHHHHHTSSSHHHHHHHHHHHH-TTSCHHHHHHHHHHHHHHHHHHTTHHHHCCCHHHHHHHHHHHHCCC------
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHH-HHCCHHHHHHHHHHHHHHHHHHhccCccCCChHHHHHHHhccccCCCccccc
Confidence 21111111 122 22344444445566666666544333445665554432
Q ss_pred ----------HHHHHHHHHHHHHchhccccccCCC
Q 020039 294 ----------QHKLVDLLKFLQKHQSTFFLSRYHS 318 (332)
Q Consensus 294 ----------~~~l~~fL~fL~~n~~~~F~~dY~~ 318 (332)
......++.||-+|.+.+|.++-..
T Consensus 191 ~~~~~~~~~~~~~~~~vve~LI~~~~~iF~~~~~~ 225 (229)
T 3iug_A 191 CFSGTAAFMEVRIQSVVVEFILNHVDVLFSGRISM 225 (229)
T ss_dssp -------------CHHHHHHHHHTHHHHTC-----
T ss_pred ccchHHHHHHHHHHHHHHHHHHHhHHHhCCCcHHh
Confidence 1122569999999999999865443
No 126
>2kkv_A Integrase; protein structure, PSI, nesgc, structural genomics, protein initiative, northeast structural genomics consortium; NMR {Salmonella enterica subsp}
Probab=28.57 E-value=1.8e+02 Score=21.53 Aligned_cols=86 Identities=12% Similarity=0.223 Sum_probs=48.3
Q ss_pred CCCCCHHHHHHHHHHhhhccCCchhhhHHHHHHHHHHHHhhhcCcccCChhhHhhHHHhhhcCCCCCcccchHHHHHHHh
Q 020039 195 PRTPNVDDILEKYCDYRSKKDGLVADSTGEIVKGLRCYFDKALPIMLLYKSEREQYEDSMAADVSPSSVYGAEHLLRLFV 274 (332)
Q Consensus 195 Pa~~tV~~IL~~Y~~~~~~~~~~~~~~~~E~~~Gl~~YFn~~L~~~LLY~~ER~QY~~ll~~~~~pS~iYG~~HLLRLfv 274 (332)
+...|+.+++++|++.. .. .....+......+..|+...+|...|-.. . ..++..++.
T Consensus 4 ~~~~t~~~~~~~wl~~~-~~--~~~~T~~~y~~~l~~~i~~~~g~~~l~~I-------------t------~~~i~~~~~ 61 (121)
T 2kkv_A 4 SGAYTFETIAREWHESN-KR--WSEDHRSRVLRYLELYIFPHIGSSDIRQL-------------K------TSHLLAPIK 61 (121)
T ss_dssp CCCCSHHHHHHHHHTTC-CS--SCHHHHHHHHHHHHHHHSSSSTTSCTTCC-------------C------SGGGHHHHH
T ss_pred cccCcHHHHHHHHHHHc-CC--CCHHHHHHHHHHHHhhcCchhcCCCHHHc-------------C------HHHHHHHHH
Confidence 45689999999999865 21 11112222223344444444444322211 2 233444444
Q ss_pred hhhHhhhcCCCCHHHHHHHHHHHHHHHHHHHHc
Q 020039 275 KLPELLVHAKIEEETLTLLQHKLVDLLKFLQKH 307 (332)
Q Consensus 275 kLP~lL~~t~~d~~s~~~l~~~l~~fL~fL~~n 307 (332)
.|-. .....+++.+...|..|++|..+.
T Consensus 62 ~l~~-----~~s~~t~~~~~~~l~~~~~~A~~~ 89 (121)
T 2kkv_A 62 EVDT-----SGKHDVAQRLQQRVTAIMRYAVQN 89 (121)
T ss_dssp HHHH-----TTTHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHH-----cCCHHHHHHHHHHHHHHHHHHHHc
Confidence 3321 125678899999999999998764
No 127
>1y71_A Kinase-associated protein B; structural genomics, midwest CE structural genomics, MCSG, protein structure initiative, PS unknown function; 1.95A {Bacillus cereus} SCOP: b.34.16.1
Probab=28.07 E-value=88 Score=25.75 Aligned_cols=32 Identities=16% Similarity=0.374 Sum_probs=25.0
Q ss_pred CcCCCCEEEEEeCCeeeeeEEEEEEeeCCeeEEEEE
Q 020039 51 PYQVNEKVLAFFQSHVYEAKVIQVQYRLKEWTFRVH 86 (332)
Q Consensus 51 ~f~vge~vl~~~~~~~YeAkIl~~~~~~~~~~Y~VH 86 (332)
.|++|+.|..+|..-.|-++|.+.+.. +|+|-
T Consensus 7 ~~~~g~~v~~~yKTG~YigeI~e~~~~----~~lVk 38 (130)
T 1y71_A 7 TFEIGEIVTGIYKTGKYIGEVTNSRPG----SYVVK 38 (130)
T ss_dssp CCCTTCEEEEEETTEEEEEEEEEEETT----EEEEE
T ss_pred cCCccceeEEEEecceeEEEEEeecCC----eEEEE
Confidence 489999999999988888888865543 55553
No 128
>3eap_A RHO GTPase-activating protein 11A; GAP, structural genomics consortium, GTPase activation, phosphoprotein, polymorphism hydrolase activator, SGC; 2.30A {Homo sapiens}
Probab=25.84 E-value=3.6e+02 Score=24.08 Aligned_cols=17 Identities=12% Similarity=-0.054 Sum_probs=14.8
Q ss_pred HHHHHHHHHHchhcccc
Q 020039 297 LVDLLKFLQKHQSTFFL 313 (332)
Q Consensus 297 l~~fL~fL~~n~~~~F~ 313 (332)
...+++||-+|.+.+|.
T Consensus 242 ~~~vve~LI~~~~~IF~ 258 (271)
T 3eap_A 242 QAAVVQTLIDYASDIGR 258 (271)
T ss_dssp HHHHHHHHHHTGGGTTC
T ss_pred HHHHHHHHHHhHHHHhC
Confidence 35789999999999997
No 129
>2xdp_A Lysine-specific demethylase 4C; oxidoreductase, histone modification; 1.56A {Homo sapiens}
Probab=25.02 E-value=1.3e+02 Score=24.41 Aligned_cols=33 Identities=18% Similarity=0.266 Sum_probs=26.6
Q ss_pred CCCCEEEEEeC-CeeeeeEEEEEEeeCCeeEEEEEEc
Q 020039 53 QVNEKVLAFFQ-SHVYEAKVIQVQYRLKEWTFRVHYL 88 (332)
Q Consensus 53 ~vge~vl~~~~-~~~YeAkIl~~~~~~~~~~Y~VHY~ 88 (332)
.+|+.|.+.|. |.+|.|+.+..... ..|-|-|.
T Consensus 66 ~~G~~V~V~W~DG~~y~a~f~g~~~~---~~YtV~Fe 99 (123)
T 2xdp_A 66 AEGEVVQVKWPDGKLYGAKYFGSNIA---HMYQVEFE 99 (123)
T ss_dssp CTTCEEEEECTTSCEEEEEEEEEEEE---EEEEEECT
T ss_pred CCCCEEEEEcCCCCEEeEEEeeeeeE---EEEEEEEC
Confidence 38999999996 89999999987543 47777775
No 130
>1p94_A Plasmid partition protein PArg; ribbon-helix-helix, dimer, DNA binding, cell cycle; NMR {Salmonella enterica} SCOP: a.43.1.3
Probab=24.96 E-value=1.2e+02 Score=22.49 Aligned_cols=39 Identities=13% Similarity=0.228 Sum_probs=29.0
Q ss_pred CCceeEEeCChhHHHHHHHHhHhhhhCCceecCCCCCCHHHHHHHHHHhh
Q 020039 162 MENFVNIQIPPPLKKQLVDDCEFITHLGKLVKLPRTPNVDDILEKYCDYR 211 (332)
Q Consensus 162 ~~~~i~I~iP~~Lk~iLvdD~e~Itk~~kL~~LPa~~tV~~IL~~Y~~~~ 211 (332)
....+.|.||+.|...|-.-+..= ..||.+||.+.++..
T Consensus 33 ~~~Rlti~i~~~lh~rlK~~Aa~~-----------g~Smsdvvreli~~~ 71 (76)
T 1p94_A 33 KIKRVNVNFDEEKHTRFKAACARK-----------GTSITDVVNQLVDNW 71 (76)
T ss_dssp CEEECCEEEEHHHHHHHHHHHHHH-----------TCCHHHHHHHHHHHH
T ss_pred CceeEEEEcCHHHHHHHHHHHHHc-----------CCCHHHHHHHHHHHH
Confidence 345688999999999988754422 269999998887644
No 131
>3byi_A RHO GTPase activating protein 15; BM046, arhgap15, structural genomics consortium, signaling protein; 2.25A {Homo sapiens}
Probab=24.51 E-value=3.3e+02 Score=23.17 Aligned_cols=145 Identities=12% Similarity=0.104 Sum_probs=66.6
Q ss_pred eCChhHHHHHHHH-hHhhhhCCceecCCCCCC-HHHHHHHHHHhhhccCCc-hhhhHHHHHHHHHHHHhhhcCcccCChh
Q 020039 169 QIPPPLKKQLVDD-CEFITHLGKLVKLPRTPN-VDDILEKYCDYRSKKDGL-VADSTGEIVKGLRCYFDKALPIMLLYKS 245 (332)
Q Consensus 169 ~iP~~Lk~iLvdD-~e~Itk~~kL~~LPa~~t-V~~IL~~Y~~~~~~~~~~-~~~~~~E~~~Gl~~YFn~~L~~~LLY~~ 245 (332)
.+|..+..++..= ..-+.. --|+++|...+ |.++.+.|-......-.. ....+..++.-|+.||.. |+.-|+-..
T Consensus 34 ~vP~~v~~~i~~l~~~gl~~-eGIfR~~G~~~~i~~L~~~~~~~~~~~~~~~~~~dvh~va~lLK~flre-LPePLl~~~ 111 (214)
T 3byi_A 34 TVPWFVKQCIEAVEKRGLDV-DGIYRVSGNLATIQKLRFIVNQEEKLNLDDSQWEDIHVVTGALKMFFRE-LPEPLFPYS 111 (214)
T ss_dssp SSCHHHHHHHHHHHHHTTTS-TTTTTSCCCHHHHHHHHHHHHTTCCCCTTSGGGCSHHHHHHHHHHHHHH-SSSCSSCHH
T ss_pred CCChHHHHHHHHHHHhCCCC-CCccccCCCHHHHHHHHHHHhcCCCCCCCcccccchHHHHHHHHHHHHh-CCCCCCCHH
Confidence 5787776654210 011222 23788887643 444444443221110011 112345566667777765 454444321
Q ss_pred hHhhHHHhhh---------------cCCCCCcccchHHHHHHHhhhhHhhhcCCCCHHHHHHH-----------------
Q 020039 246 EREQYEDSMA---------------ADVSPSSVYGAEHLLRLFVKLPELLVHAKIEEETLTLL----------------- 293 (332)
Q Consensus 246 ER~QY~~ll~---------------~~~~pS~iYG~~HLLRLfvkLP~lL~~t~~d~~s~~~l----------------- 293 (332)
=-.++.+... ...++....=..+|+++|.++-.--....|+...+..+
T Consensus 112 l~~~~~~~~~~~~~~~~~~~l~~ll~~LP~~n~~~L~~L~~~L~~v~~~s~~NkM~~~NLa~vf~P~Ll~~~~~~~~~~~ 191 (214)
T 3byi_A 112 FFEQFVEAIKKQDNNTRIEAVKSLVQKLPPPNRDTMKVLFGHLTKIVAKASKNLMSTQSLGIVFGPTLLRAENETGNMAI 191 (214)
T ss_dssp HHHHHHHHHTSSSHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHTHHHHCCCHHHHHHHHHHHHHCCTTSSSCHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHcccCCCCCHHHhHHHhccccCCCCCccHHHHH
Confidence 1111111111 11133333334455555555433223344555444321
Q ss_pred -HHHHHHHHHHHHHchhcccccc
Q 020039 294 -QHKLVDLLKFLQKHQSTFFLSR 315 (332)
Q Consensus 294 -~~~l~~fL~fL~~n~~~~F~~d 315 (332)
+.....+++||-.|.+.+|.+|
T Consensus 192 ~~~~~~~vve~LI~~~~~iF~~d 214 (214)
T 3byi_A 192 HMVYQNQIAELMLSEYSKIFGSE 214 (214)
T ss_dssp HHHHHHHHHHHHHHTHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHHHhcCCC
Confidence 2345678999999999988743
No 132
>2qqr_A JMJC domain-containing histone demethylation protein 3A; histone lysine demethylase, tandem hybrid tudor domains, metal binding protein; 1.80A {Homo sapiens} SCOP: b.34.9.1 b.34.9.1 PDB: 2qqs_A* 2gfa_A* 2gf7_A*
Probab=23.97 E-value=1.6e+02 Score=23.66 Aligned_cols=33 Identities=21% Similarity=0.288 Sum_probs=25.9
Q ss_pred CCCEEEEEe-CCeeeeeEEEEEEeeCCeeEEEEEEcC
Q 020039 54 VNEKVLAFF-QSHVYEAKVIQVQYRLKEWTFRVHYLG 89 (332)
Q Consensus 54 vge~vl~~~-~~~~YeAkIl~~~~~~~~~~Y~VHY~G 89 (332)
+|+.|.+.| .|.+|.|+.+..... ..|-|-|..
T Consensus 66 ~G~~V~V~W~DG~~y~a~f~g~~~~---~~Y~V~feD 99 (118)
T 2qqr_A 66 EGEVVQVRWTDGQVYGAKFVASHPI---QMYQVEFED 99 (118)
T ss_dssp TTCEEEEECTTSCEEEEEEEEEEEE---EEEEEEETT
T ss_pred CCCEEEEEcCCCCEeeeEEeceeEE---EEEEEEECC
Confidence 799999999 489999999875543 477777753
No 133
>2h1e_A Chromo domain protein 1; CHD1, tandem chromodomains, three-stranded ANT B-sheet, hydrolase; 2.20A {Saccharomyces cerevisiae} PDB: 2dy7_A 2dy8_A
Probab=23.67 E-value=61 Score=27.79 Aligned_cols=35 Identities=14% Similarity=0.293 Sum_probs=27.1
Q ss_pred EEEEEEe-----eCCeeEEEEEEcCCCCCccceecccccc
Q 020039 70 KVIQVQY-----RLKEWTFRVHYLGWNKSWDEWVGVHRLM 104 (332)
Q Consensus 70 kIl~~~~-----~~~~~~Y~VHY~GWn~r~DEWV~~~ri~ 104 (332)
+|+..+. ..+...|||-+.|+...-.-|.++..|.
T Consensus 125 rIi~~r~~~~~~~~~~~~YLVKWkgl~y~e~TWE~~~~~~ 164 (177)
T 2h1e_A 125 RIIDSQRASLEDGTSQLQYLVKWRRLNYDEATWENATDIV 164 (177)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEETTSCSTTCEEEEHHHHH
T ss_pred EEEEEeeecccCCCCcEEEEEEeCCCCcccccccChHHhh
Confidence 4555553 4678899999999998888999987653
No 134
>1use_A VAsp, vasodilator-stimulated phosphoprotein; signaling protein, null; 1.3A {Homo sapiens} SCOP: h.1.29.1 PDB: 1usd_A
Probab=22.21 E-value=1.2e+02 Score=20.54 Aligned_cols=28 Identities=21% Similarity=0.232 Sum_probs=19.1
Q ss_pred HHHHHHHHhhhccCCchhhhHHHHHHHHHHHHhhh
Q 020039 202 DILEKYCDYRSKKDGLVADSTGEIVKGLRCYFDKA 236 (332)
Q Consensus 202 ~IL~~Y~~~~~~~~~~~~~~~~E~~~Gl~~YFn~~ 236 (332)
+||+++.+.... .-.|++++|+..|++.
T Consensus 15 EIL~E~RkElqK-------~K~EIIeAi~~El~~~ 42 (45)
T 1use_A 15 ELLEEVKKELQK-------VKEEIIEAFVQELRKR 42 (45)
T ss_dssp HHHHHHHHHHHH-------HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHH-------HHHHHHHHHHHHHHhc
Confidence 566666554432 2368999999999874
No 135
>3mlq_E Transcription-repair coupling factor; tudor, transferase-transcription complex; 2.91A {Thermus thermophilus}
Probab=21.67 E-value=1e+02 Score=22.37 Aligned_cols=49 Identities=12% Similarity=0.062 Sum_probs=17.3
Q ss_pred CcCCCCEEEEEeCC-eeeeeEEEEEEeeCC-eeEEEEEEcCCCCCccceeccccc
Q 020039 51 PYQVNEKVLAFFQS-HVYEAKVIQVQYRLK-EWTFRVHYLGWNKSWDEWVGVHRL 103 (332)
Q Consensus 51 ~f~vge~vl~~~~~-~~YeAkIl~~~~~~~-~~~Y~VHY~GWn~r~DEWV~~~ri 103 (332)
.|++||.|+.-.-| -.|.+ |..+..... ...|.++|.+=. -=.||.+++
T Consensus 2 ~l~~GD~VVh~~hGiG~~~g-i~~~~v~g~~~ey~~l~y~~~~---~l~VPv~~~ 52 (71)
T 3mlq_E 2 PHMPGDYLIHPEHGVGQYLG-LETREVLGVKRDYLVLRYKGEG---KLYLPVEQL 52 (71)
T ss_dssp --------------CEEEEE-EEEEEETTEEEEEEEEEETTTE---EEEEESSSC
T ss_pred cCCCCCEEEECCCeeEEEeE-EEEEEeCCeeEEEEEEEECCCC---EEEEEhhhh
Confidence 48999999876554 34443 333333222 335668898521 256777654
No 136
>2b2y_A CHD-1, chromodomain-helicase-DNA-binding protein 1; three stranded antiparallel beta sheet, alpha helix linker, peptide binding protein; 2.35A {Homo sapiens} SCOP: b.34.13.2 b.34.13.2 PDB: 2b2u_A* 2b2v_A* 2b2w_A 2b2t_A*
Probab=21.65 E-value=60 Score=28.08 Aligned_cols=34 Identities=12% Similarity=0.090 Sum_probs=26.8
Q ss_pred EEEEEEe---eCCeeEEEEEEcCCCCCccceeccccc
Q 020039 70 KVIQVQY---RLKEWTFRVHYLGWNKSWDEWVGVHRL 103 (332)
Q Consensus 70 kIl~~~~---~~~~~~Y~VHY~GWn~r~DEWV~~~ri 103 (332)
+|+..+. ..+...|||.+.|+...-.-|.+++.|
T Consensus 135 rIi~~r~~~~~~g~~~yLVKWkgl~Y~e~TWE~~~~i 171 (187)
T 2b2y_A 135 RIIAHSNQKSAAGYPDYYCKWQGLPYSECSWEDGALI 171 (187)
T ss_dssp EEEEEEEEECTTSCEEEEEEETTSCGGGCEEECHHHH
T ss_pred EEEEeeeecCCCCcEEEEEEECCCChhhCcccchhhh
Confidence 4666655 467889999999999877789998654
No 137
>2jvv_A Transcription antitermination protein NUSG; transcription factor, transcription regulation, transcription termination; NMR {Escherichia coli} PDB: 2k06_A 2kvq_G
Probab=21.47 E-value=1.2e+02 Score=25.46 Aligned_cols=41 Identities=17% Similarity=0.193 Sum_probs=30.2
Q ss_pred CCCcCCCCEEEEEeCCe-eeeeEEEEEEeeCCeeEEEEEEcC
Q 020039 49 SCPYQVNEKVLAFFQSH-VYEAKVIQVQYRLKEWTFRVHYLG 89 (332)
Q Consensus 49 ~~~f~vge~vl~~~~~~-~YeAkIl~~~~~~~~~~Y~VHY~G 89 (332)
...|++||+|.+..|+. -++|.|.++...++...-.|.-.|
T Consensus 125 ~~~~~~Gd~V~V~~GPf~g~~G~v~~v~~~k~r~~V~v~ifg 166 (181)
T 2jvv_A 125 KTLFEPGEMVRVNDGPFADFNGVVEEVDYEKSRLKVSVSIFG 166 (181)
T ss_dssp CCCCCTTEEEEECSSTTTTEEEEEEEEETTTTEEEEEEEETT
T ss_pred cccCCCCCEEEEeccCCCCcEEEEEEEeCCCCEEEEEEEECC
Confidence 34699999999999984 699999999866544444444433
No 138
>3nnf_A CURA; non-HAEM Fe(II)/alpha-ketoglutarate-dependent enzymes, catal cryptic chlorination, biosynthetic protein; HET: AKG; 2.20A {Lyngbya majuscula} PDB: 3nnj_A 3nnl_A* 3nnm_A
Probab=20.42 E-value=47 Score=31.55 Aligned_cols=46 Identities=11% Similarity=0.209 Sum_probs=31.4
Q ss_pred CcCCCCEEEEEeCCeeeeeEEEEEEeeCCeeEEEEEEcCCCCCccce
Q 020039 51 PYQVNEKVLAFFQSHVYEAKVIQVQYRLKEWTFRVHYLGWNKSWDEW 97 (332)
Q Consensus 51 ~f~vge~vl~~~~~~~YeAkIl~~~~~~~~~~Y~VHY~GWn~r~DEW 97 (332)
.|++|+ |+||+...+.-|.=+.-.......-|-+.|.||..|||.-
T Consensus 237 d~epGD-av~F~~~tlHga~plgn~~~~rRRAfS~RfvGDDaryd~~ 282 (344)
T 3nnf_A 237 EYNLGD-AFFFNKYVLHQSVPLKPGLHKLRRAFVIRLVDYDTRVDEE 282 (344)
T ss_dssp CBCTTC-EEEEETTCEEEECCBCTTSCSCEEEEEEEEEETTCBBCHH
T ss_pred cCCCCc-EEEEecceeecCCCCCCCCccceeEEEEEEecCcceehHH
Confidence 368999 8899988777663111111122346999999999999964
No 139
>2loj_A Putative cytoplasmic protein; pathogenic bacterial protein, PSI-biology, northeast structu genomics consortium (NESG); NMR {Salmonella enterica subsp}
Probab=20.37 E-value=2.5e+02 Score=20.23 Aligned_cols=25 Identities=12% Similarity=0.091 Sum_probs=20.3
Q ss_pred CCCCcCCCCEEEEEeCCeeeeeEEE
Q 020039 48 ASCPYQVNEKVLAFFQSHVYEAKVI 72 (332)
Q Consensus 48 ~~~~f~vge~vl~~~~~~~YeAkIl 72 (332)
+...|.-+..|...|+|..|--+|.
T Consensus 30 S~~Ll~g~~~v~I~H~G~~Y~LR~T 54 (63)
T 2loj_A 30 SQALLGPDGKVIIDHNGQEYLLRKT 54 (63)
T ss_dssp GGGSSTTTCEEEEEETTEEEEEEEE
T ss_pred HHHHhCCCCEEEEEeCCeEEEeEEc
Confidence 3446888899999999999977765
No 140
>4hg1_A Putative cytoplasmic protein; PSI-biology, MCSG, midwest center for structural genomics; HET: MLY MSE MLZ PG4; 1.75A {Salmonella enterica subsp} PDB: 4hg1_C* 4hg1_B*
Probab=20.22 E-value=40 Score=29.44 Aligned_cols=27 Identities=19% Similarity=0.315 Sum_probs=22.2
Q ss_pred eEEeCChhHHHHHHHHhHhhhhCCcee
Q 020039 166 VNIQIPPPLKKQLVDDCEFITHLGKLV 192 (332)
Q Consensus 166 i~I~iP~~Lk~iLvdD~e~Itk~~kL~ 192 (332)
-++.+|.+||.+|.-|++++.-.++.|
T Consensus 47 ET~~LPeSLkALLAYD~~L~sp~~~~V 73 (225)
T 4hg1_A 47 ETTELPESLXALLAYDRDLLSNYNMPV 73 (225)
T ss_dssp CEECCCHHHHHHHHHCTTCBCTTSCBS
T ss_pred ccccCcHHHHHHHHhhhhccCcCCCcH
Confidence 468999999999999999987555443
Done!