BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020050
(332 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1QGJ|A Chain A, Arabidopsis Thaliana Peroxidase N
pdb|1QGJ|B Chain B, Arabidopsis Thaliana Peroxidase N
Length = 300
Score = 414 bits (1064), Expect = e-116, Method: Compositional matrix adjust.
Identities = 203/302 (67%), Positives = 247/302 (81%), Gaps = 4/302 (1%)
Query: 27 QLSTNFYSKTCPNVLQIVRREVQKAIKVEMRMAASLIRLHFHDCFVNGCDASVLLDGSDS 86
QLS + Y+K+CPN++QIVR++V A+K E+RMAASLIRLHFHDCFVNGCDAS+LLDG+DS
Sbjct: 1 QLSPDIYAKSCPNLVQIVRKQVAIALKAEIRMAASLIRLHFHDCFVNGCDASLLLDGADS 60
Query: 87 EKFAAPNRNSARGFEVIDAIKTAVERQCSGVVSCADILAIAARDSVLLSGGPTWKVLLGR 146
EK A PN NSARGFEVID IK AVE C GVVSCADIL +AARDSV+LSGGP W+V LGR
Sbjct: 61 EKLAIPNINSARGFEVIDTIKAAVENACPGVVSCADILTLAARDSVVLSGGPGWRVALGR 120
Query: 147 RDGLVANQTGANALPSPFEGLNILTAKFAAVGLNITDLVSLSGGAHTIGLAKCAFFSNRL 206
+DGLVANQ AN LPSPFE L+ + AKF AV LNITD+V+LS GAHT G AKCA FSNRL
Sbjct: 121 KDGLVANQNSANNLPSPFEPLDAIIAKFVAVNLNITDVVALS-GAHTFGQAKCAVFSNRL 179
Query: 207 SNFSGTGAPDATMDTSLVSELRSLCA-NGDGNNTAPLDRNSIDLFDNHYFQNLINNKGLL 265
NF+G G PDAT++TSL+S L+++C G+ N TAPLDR++ D FDN+YF+NL+ KGLL
Sbjct: 180 FNFTGAGNPDATLETSLLSNLQTVCPLGGNSNITAPLDRSTTDTFDNNYFKNLLEGKGLL 239
Query: 266 SSDQILYSSDEAKSTTKSLVESYSSNSNLFFANFVNSMIKMGNVSPLTGTNGEIRKNCRA 325
SSDQIL+SSD A +TTK LVE+YS + +LFF +F +MI+MGN+S G +GE+R NCR
Sbjct: 240 SSDQILFSSDLAVNTTKKLVEAYSRSQSLFFRDFTCAMIRMGNIS--NGASGEVRTNCRV 297
Query: 326 VN 327
+N
Sbjct: 298 IN 299
>pdb|1PA2|A Chain A, Arabidopsis Thaliana Peroxidase A2
pdb|1QO4|A Chain A, Arabidopsis Thaliana Peroxidase A2 At Room Temperature
Length = 306
Score = 349 bits (896), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 179/306 (58%), Positives = 226/306 (73%), Gaps = 8/306 (2%)
Query: 27 QLSTNFYSKTCPNVLQIVRREVQKAIKVEMRMAASLIRLHFHDCFVNGCDASVLLDGS-- 84
QL+ FYS TCPN IVR +Q+A++ + R+ ASLIRLHFHDCFVNGCDAS+LLD +
Sbjct: 2 QLNATFYSGTCPNASAIVRSTIQQALQSDTRIGASLIRLHFHDCFVNGCDASILLDDTGS 61
Query: 85 -DSEKFAAPNRNSARGFEVIDAIKTAVERQCSGVVSCADILAIAARDSVLLSGGPTWKVL 143
SEK A PN NSARGF V+D IKTA+E C GVVSC+D+LA+A+ SV L+GGP+W VL
Sbjct: 62 IQSEKNAGPNVNSARGFNVVDNIKTALENACPGVVSCSDVLALASEASVSLAGGPSWTVL 121
Query: 144 LGRRDGLVANQTGAN-ALPSPFEGLNILTAKFAAVGLNITDLVSLSGGAHTIGLAKCAFF 202
LGRRD L AN GAN ++PSP E L+ +T KF+AVGLN DLV+LS GAHT G A+C F
Sbjct: 122 LGRRDSLTANLAGANSSIPSPIESLSNITFKFSAVGLNTNDLVALS-GAHTFGRARCGVF 180
Query: 203 SNRLSNFSGTGAPDATMDTSLVSELRSLCA-NGDGNNTAPLDRNSIDLFDNHYFQNLINN 261
+NRL NFSGTG PD T++++L+S L+ LC NG + LD ++ D FDN+YF NL +N
Sbjct: 181 NNRLFNFSGTGNPDPTLNSTLLSTLQQLCPQNGSASTITNLDLSTPDAFDNNYFANLQSN 240
Query: 262 KGLLSSDQILYSSDEAKSTTKSLVESYSSNSNLFFANFVNSMIKMGNVSPLTGTNGEIRK 321
GLL SDQ L+S+ S+T ++V S++SN LFF F SMI MGN+SPLTG+NGEIR
Sbjct: 241 DGLLQSDQELFST--TGSSTIAIVTSFASNQTLFFQAFAQSMINMGNISPLTGSNGEIRL 298
Query: 322 NCRAVN 327
+C+ VN
Sbjct: 299 DCKKVN 304
>pdb|4A5G|A Chain A, Raphanus Sativus Anionic Peroxidase.
pdb|4A5G|B Chain B, Raphanus Sativus Anionic Peroxidase
Length = 308
Score = 326 bits (836), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 177/305 (58%), Positives = 222/305 (72%), Gaps = 8/305 (2%)
Query: 28 LSTNFYSKTCPNVLQIVRREVQKAIKVEMRMAASLIRLHFHDCFVNGCDASVLLDGSDS- 86
L+ FY+ TCPN +VR VQ+A + + R+ ASLIRLHFHDCFV GCDAS+LLD S S
Sbjct: 4 LNATFYAGTCPNASAMVRTIVQQAFQSDSRIGASLIRLHFHDCFVLGCDASILLDNSGSI 63
Query: 87 --EKFAAPNRNSARGFEVIDAIKTAVERQCSGVVSCADILAIAARDSVLLSGGPTWKVLL 144
EK A PN NSARGF V+D IKTA+E C GVVSC D+LA+A++ SV LSGGP+W V L
Sbjct: 64 ISEKNAGPNANSARGFNVVDNIKTALENACPGVVSCTDVLALASQASVSLSGGPSWTVDL 123
Query: 145 GRRDGLVANQTGAN-ALPSPFEGLNILTAKFAAVGLNITDLVSLSGGAHTIGLAKCAFFS 203
GRRD L ANQ GAN ++PSP +GL+ +T+KF+AVGLN DLV+LS GAHT G A C FS
Sbjct: 124 GRRDTLTANQAGANSSIPSPTQGLSNITSKFSAVGLNTNDLVALS-GAHTFGRATCGVFS 182
Query: 204 NRLSNFSGTGAPDATMDTSLVSELRSLCAN-GDGNNTAPLDRNSIDLFDNHYFQNLINNK 262
NRL NFSG G PD T++T+L+S L+ LC G G+ + LD ++ D FDN+YF NL +N
Sbjct: 183 NRLFNFSGKGNPDPTLNTTLLSTLQELCPQKGRGSGSTNLDLSTPDAFDNNYFTNLQSNN 242
Query: 263 GLLSSDQILYSSDEAKSTTKSLVESYSSNSNLFFANFVNSMIKMGNVSPLTGTNGEIRKN 322
GLL SDQ L+S+ S T ++V S++SN LFF F SMI MGN+SPLTG++GEIR +
Sbjct: 243 GLLQSDQELFST--TGSATIAIVTSFASNQTLFFQAFAQSMINMGNISPLTGSSGEIRLD 300
Query: 323 CRAVN 327
C+ N
Sbjct: 301 CKKTN 305
>pdb|3ATJ|A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase
In Complex With Benzhydroxamic Acid
pdb|3ATJ|B Chain B, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase
In Complex With Benzhydroxamic Acid
pdb|1GWT|A Chain A, Recombinant Horseradish Peroxidase C1a Phe221met
Length = 309
Score = 296 bits (758), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 162/308 (52%), Positives = 206/308 (66%), Gaps = 8/308 (2%)
Query: 27 QLSTNFYSKTCPNVLQIVRREVQKAIKVEMRMAASLIRLHFHDCFVNGCDASVLLDGSDS 86
QL+ FY +CPNV IVR + ++ + R+AAS++RLHFHDCFVNGCDAS+LLD + S
Sbjct: 2 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTS 61
Query: 87 ---EKFAAPNRNSARGFEVIDAIKTAVERQCSGVVSCADILAIAARDSVLLSGGPTWKVL 143
EK A N NSARGF VID +K AVE C VSCAD+L IAA+ SV L+GGP+W+V
Sbjct: 62 FRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVP 121
Query: 144 LGRRDGLVANQTGANA-LPSPFEGLNILTAKFAAVGLN-ITDLVSLSGGAHTIGLAKCAF 201
LGRRD L A ANA LP+PF L L F VGLN +DLV+LSGG HT G +C F
Sbjct: 122 LGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGG-HTFGKNQCRF 180
Query: 202 FSNRLSNFSGTGAPDATMDTSLVSELRSLCA-NGDGNNTAPLDRNSIDLFDNHYFQNLIN 260
+RL NFS TG PD T++T+ + LR LC NG+ + +D + +FDN Y+ NL
Sbjct: 181 IMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDMDLRTPTIFDNKYYVNLEE 240
Query: 261 NKGLLSSDQILYSSDEAKSTTKSLVESYSSNSNLFFANFVNSMIKMGNVSPLTGTNGEIR 320
KGL+ SDQ L+SS A T LV S+++++ FF FV +M +MGN++PLTGT G+IR
Sbjct: 241 QKGLIQSDQELFSSPNATDTIP-LVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIR 299
Query: 321 KNCRAVNS 328
NCR VNS
Sbjct: 300 LNCRVVNS 307
>pdb|1W4W|A Chain A, Ferric Horseradish Peroxidase C1a In Complex With Formate
pdb|1W4Y|A Chain A, Ferrous Horseradish Peroxidase C1a In Complex With Carbon
Monoxide
Length = 323
Score = 295 bits (756), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 162/308 (52%), Positives = 205/308 (66%), Gaps = 8/308 (2%)
Query: 27 QLSTNFYSKTCPNVLQIVRREVQKAIKVEMRMAASLIRLHFHDCFVNGCDASVLLDGSDS 86
QL+ FY +CPNV IVR + ++ + R+AAS++RLHFHDCFVNGCDAS+LLD + S
Sbjct: 1 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTS 60
Query: 87 ---EKFAAPNRNSARGFEVIDAIKTAVERQCSGVVSCADILAIAARDSVLLSGGPTWKVL 143
EK A N NSARGF VID +K AVE C VSCAD+L IAA+ SV L+GGP+W+V
Sbjct: 61 FRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVP 120
Query: 144 LGRRDGLVANQTGANA-LPSPFEGLNILTAKFAAVGLN-ITDLVSLSGGAHTIGLAKCAF 201
LGRRD L A ANA LP+PF L L F VGLN +DLV+LSGG HT G +C F
Sbjct: 121 LGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGG-HTFGKNQCRF 179
Query: 202 FSNRLSNFSGTGAPDATMDTSLVSELRSLCA-NGDGNNTAPLDRNSIDLFDNHYFQNLIN 260
+RL NFS TG PD T++T+ + LR LC NG+ + D + +FDN Y+ NL
Sbjct: 180 IMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEE 239
Query: 261 NKGLLSSDQILYSSDEAKSTTKSLVESYSSNSNLFFANFVNSMIKMGNVSPLTGTNGEIR 320
KGL+ SDQ L+SS A T LV S+++++ FF FV +M +MGN++PLTGT G+IR
Sbjct: 240 QKGLIQSDQELFSSPNATDTIP-LVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIR 298
Query: 321 KNCRAVNS 328
NCR VNS
Sbjct: 299 LNCRVVNS 306
>pdb|2ATJ|A Chain A, Recombinant Horseradish Peroxidase Complex With
Benzhydroxamic Acid
pdb|2ATJ|B Chain B, Recombinant Horseradish Peroxidase Complex With
Benzhydroxamic Acid
Length = 308
Score = 295 bits (756), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 162/308 (52%), Positives = 205/308 (66%), Gaps = 8/308 (2%)
Query: 27 QLSTNFYSKTCPNVLQIVRREVQKAIKVEMRMAASLIRLHFHDCFVNGCDASVLLDGSDS 86
QL+ FY +CPNV IVR + ++ + R+AAS++RLHFHDCFVNGCDAS+LLD + S
Sbjct: 2 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTS 61
Query: 87 ---EKFAAPNRNSARGFEVIDAIKTAVERQCSGVVSCADILAIAARDSVLLSGGPTWKVL 143
EK A N NSARGF VID +K AVE C VSCAD+L IAA+ SV L+GGP+W+V
Sbjct: 62 FRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVP 121
Query: 144 LGRRDGLVANQTGANA-LPSPFEGLNILTAKFAAVGLN-ITDLVSLSGGAHTIGLAKCAF 201
LGRRD L A ANA LP+PF L L F VGLN +DLV+LSGG HT G +C F
Sbjct: 122 LGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGG-HTFGKNQCRF 180
Query: 202 FSNRLSNFSGTGAPDATMDTSLVSELRSLCA-NGDGNNTAPLDRNSIDLFDNHYFQNLIN 260
+RL NFS TG PD T++T+ + LR LC NG+ + D + +FDN Y+ NL
Sbjct: 181 IMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEE 240
Query: 261 NKGLLSSDQILYSSDEAKSTTKSLVESYSSNSNLFFANFVNSMIKMGNVSPLTGTNGEIR 320
KGL+ SDQ L+SS A T LV S+++++ FF FV +M +MGN++PLTGT G+IR
Sbjct: 241 QKGLIQSDQELFSSPNATDTIP-LVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIR 299
Query: 321 KNCRAVNS 328
NCR VNS
Sbjct: 300 LNCRVVNS 307
>pdb|6ATJ|A Chain A, Recombinant Horseradish Peroxidase C Complex With Ferulic
Acid
pdb|7ATJ|A Chain A, Recombinant Horseradish Peroxidase C1a Complex With
Cyanide And Ferulic Acid
pdb|1H5D|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (0-11% Dose)
pdb|1H5E|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (11-22% Dose)
pdb|1H5F|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (22-33% Dose)
pdb|1H5G|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (33-44% Dose)
pdb|1H5I|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (56-67% Dose)
pdb|1H5J|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (67-78% Dose)
pdb|1H5K|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (78-89% Dose)
pdb|1H5M|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (0-100% Dose)
pdb|1H55|A Chain A, Structure Of Horseradish Peroxidase C1a Compound Ii
pdb|1H57|A Chain A, Structure Of Horseradish Peroxidase C1a Compound Iii
pdb|1H58|A Chain A, Structure Of Ferrous Horseradish Peroxidase C1a
pdb|1H5A|A Chain A, Structure Of Ferric Horseradish Peroxidase C1a In Complex
With Acetate
pdb|1H5C|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (100-200% Dose)
pdb|1H5H|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (44-56% Dose)
pdb|1H5L|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (89-100% Dose)
Length = 308
Score = 295 bits (755), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 162/308 (52%), Positives = 205/308 (66%), Gaps = 8/308 (2%)
Query: 27 QLSTNFYSKTCPNVLQIVRREVQKAIKVEMRMAASLIRLHFHDCFVNGCDASVLLDGSDS 86
QL+ FY +CPNV IVR + ++ + R+AAS++RLHFHDCFVNGCDAS+LLD + S
Sbjct: 1 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTS 60
Query: 87 ---EKFAAPNRNSARGFEVIDAIKTAVERQCSGVVSCADILAIAARDSVLLSGGPTWKVL 143
EK A N NSARGF VID +K AVE C VSCAD+L IAA+ SV L+GGP+W+V
Sbjct: 61 FRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVP 120
Query: 144 LGRRDGLVANQTGANA-LPSPFEGLNILTAKFAAVGLN-ITDLVSLSGGAHTIGLAKCAF 201
LGRRD L A ANA LP+PF L L F VGLN +DLV+LSGG HT G +C F
Sbjct: 121 LGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGG-HTFGKNQCRF 179
Query: 202 FSNRLSNFSGTGAPDATMDTSLVSELRSLCA-NGDGNNTAPLDRNSIDLFDNHYFQNLIN 260
+RL NFS TG PD T++T+ + LR LC NG+ + D + +FDN Y+ NL
Sbjct: 180 IMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEE 239
Query: 261 NKGLLSSDQILYSSDEAKSTTKSLVESYSSNSNLFFANFVNSMIKMGNVSPLTGTNGEIR 320
KGL+ SDQ L+SS A T LV S+++++ FF FV +M +MGN++PLTGT G+IR
Sbjct: 240 QKGLIQSDQELFSSPNATDTIP-LVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIR 298
Query: 321 KNCRAVNS 328
NCR VNS
Sbjct: 299 LNCRVVNS 306
>pdb|1ATJ|A Chain A, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|B Chain B, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|C Chain C, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|D Chain D, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|E Chain E, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|F Chain F, Recombinant Horseradish Peroxidase C1a
pdb|1HCH|A Chain A, Structure Of Horseradish Peroxidase C1a Compound I
Length = 306
Score = 295 bits (755), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 162/308 (52%), Positives = 205/308 (66%), Gaps = 8/308 (2%)
Query: 27 QLSTNFYSKTCPNVLQIVRREVQKAIKVEMRMAASLIRLHFHDCFVNGCDASVLLDGSDS 86
QL+ FY +CPNV IVR + ++ + R+AAS++RLHFHDCFVNGCDAS+LLD + S
Sbjct: 1 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTS 60
Query: 87 ---EKFAAPNRNSARGFEVIDAIKTAVERQCSGVVSCADILAIAARDSVLLSGGPTWKVL 143
EK A N NSARGF VID +K AVE C VSCAD+L IAA+ SV L+GGP+W+V
Sbjct: 61 FRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVP 120
Query: 144 LGRRDGLVANQTGANA-LPSPFEGLNILTAKFAAVGLN-ITDLVSLSGGAHTIGLAKCAF 201
LGRRD L A ANA LP+PF L L F VGLN +DLV+LSGG HT G +C F
Sbjct: 121 LGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGG-HTFGKNQCRF 179
Query: 202 FSNRLSNFSGTGAPDATMDTSLVSELRSLCA-NGDGNNTAPLDRNSIDLFDNHYFQNLIN 260
+RL NFS TG PD T++T+ + LR LC NG+ + D + +FDN Y+ NL
Sbjct: 180 IMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEE 239
Query: 261 NKGLLSSDQILYSSDEAKSTTKSLVESYSSNSNLFFANFVNSMIKMGNVSPLTGTNGEIR 320
KGL+ SDQ L+SS A T LV S+++++ FF FV +M +MGN++PLTGT G+IR
Sbjct: 240 QKGLIQSDQELFSSPNATDTIP-LVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIR 298
Query: 321 KNCRAVNS 328
NCR VNS
Sbjct: 299 LNCRVVNS 306
>pdb|1GWO|A Chain A, Recombinant Horseradish Peroxidase C1a Ala170gln
Length = 309
Score = 295 bits (754), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 162/308 (52%), Positives = 204/308 (66%), Gaps = 8/308 (2%)
Query: 27 QLSTNFYSKTCPNVLQIVRREVQKAIKVEMRMAASLIRLHFHDCFVNGCDASVLLDGSDS 86
QL+ FY +CPNV IVR + ++ + R+AAS++RLHFHDCFVNGCDAS+LLD + S
Sbjct: 2 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTS 61
Query: 87 ---EKFAAPNRNSARGFEVIDAIKTAVERQCSGVVSCADILAIAARDSVLLSGGPTWKVL 143
EK A N NSARGF VID +K AVE C VSCAD+L IAA+ SV L+GGP+W+V
Sbjct: 62 FRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVP 121
Query: 144 LGRRDGLVANQTGANA-LPSPFEGLNILTAKFAAVGLN-ITDLVSLSGGAHTIGLAKCAF 201
LGRRD L A ANA LP PF L L F VGLN +DLV+LSGG HT G +C F
Sbjct: 122 LGRRDSLQAFLDLANANLPQPFFTLPQLKDSFRNVGLNRSSDLVALSGG-HTFGKNQCRF 180
Query: 202 FSNRLSNFSGTGAPDATMDTSLVSELRSLCA-NGDGNNTAPLDRNSIDLFDNHYFQNLIN 260
+RL NFS TG PD T++T+ + LR LC NG+ + D + +FDN Y+ NL
Sbjct: 181 IMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEE 240
Query: 261 NKGLLSSDQILYSSDEAKSTTKSLVESYSSNSNLFFANFVNSMIKMGNVSPLTGTNGEIR 320
KGL+ SDQ L+SS A T LV S+++++ FF FV +M +MGN++PLTGT G+IR
Sbjct: 241 QKGLIQSDQELFSSPNATDTIP-LVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIR 299
Query: 321 KNCRAVNS 328
NCR VNS
Sbjct: 300 LNCRVVNS 307
>pdb|1GWU|A Chain A, Recombinant Horseradish Peroxidase C1a Ala140gly
Length = 309
Score = 294 bits (753), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 162/308 (52%), Positives = 204/308 (66%), Gaps = 8/308 (2%)
Query: 27 QLSTNFYSKTCPNVLQIVRREVQKAIKVEMRMAASLIRLHFHDCFVNGCDASVLLDGSDS 86
QL+ FY +CPNV IVR + ++ + R+AAS++RLHFHDCFVNGCDAS+LLD + S
Sbjct: 2 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTS 61
Query: 87 ---EKFAAPNRNSARGFEVIDAIKTAVERQCSGVVSCADILAIAARDSVLLSGGPTWKVL 143
EK A N NSARGF VID +K AVE C VSCAD+L IAA+ SV L+GGP+W+V
Sbjct: 62 FRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVP 121
Query: 144 LGRRDGLVANQTGANA-LPSPFEGLNILTAKFAAVGLN-ITDLVSLSGGAHTIGLAKCAF 201
LGRRD L A ANA LP PF L L F VGLN +DLV+LSGG HT G +C F
Sbjct: 122 LGRRDSLQAFLDLANANLPGPFFTLPQLKDSFRNVGLNRSSDLVALSGG-HTFGKNQCRF 180
Query: 202 FSNRLSNFSGTGAPDATMDTSLVSELRSLCA-NGDGNNTAPLDRNSIDLFDNHYFQNLIN 260
+RL NFS TG PD T++T+ + LR LC NG+ + D + +FDN Y+ NL
Sbjct: 181 IMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEE 240
Query: 261 NKGLLSSDQILYSSDEAKSTTKSLVESYSSNSNLFFANFVNSMIKMGNVSPLTGTNGEIR 320
KGL+ SDQ L+SS A T LV S+++++ FF FV +M +MGN++PLTGT G+IR
Sbjct: 241 QKGLIQSDQELFSSPNATDTIP-LVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIR 299
Query: 321 KNCRAVNS 328
NCR VNS
Sbjct: 300 LNCRVVNS 307
>pdb|1GW2|A Chain A, Recombinant Horseradish Peroxidase C1a Thr171ser In
Complex With Ferulic Acid
Length = 308
Score = 293 bits (751), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 161/308 (52%), Positives = 205/308 (66%), Gaps = 8/308 (2%)
Query: 27 QLSTNFYSKTCPNVLQIVRREVQKAIKVEMRMAASLIRLHFHDCFVNGCDASVLLDGSDS 86
QL+ FY +CPNV IVR + ++ + R+AAS++RLHFHDCFVNGCDAS+LLD + S
Sbjct: 1 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTS 60
Query: 87 ---EKFAAPNRNSARGFEVIDAIKTAVERQCSGVVSCADILAIAARDSVLLSGGPTWKVL 143
EK A N NSARGF VID +K AVE C VSCAD+L IAA+ SV L+GGP+W+V
Sbjct: 61 FRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVP 120
Query: 144 LGRRDGLVANQTGANA-LPSPFEGLNILTAKFAAVGLN-ITDLVSLSGGAHTIGLAKCAF 201
LGRRD L A ANA LP+PF L L F VGLN +DLV+LSGG H+ G +C F
Sbjct: 121 LGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGG-HSFGKNQCRF 179
Query: 202 FSNRLSNFSGTGAPDATMDTSLVSELRSLCA-NGDGNNTAPLDRNSIDLFDNHYFQNLIN 260
+RL NFS TG PD T++T+ + LR LC NG+ + D + +FDN Y+ NL
Sbjct: 180 IMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEE 239
Query: 261 NKGLLSSDQILYSSDEAKSTTKSLVESYSSNSNLFFANFVNSMIKMGNVSPLTGTNGEIR 320
KGL+ SDQ L+SS A T LV S+++++ FF FV +M +MGN++PLTGT G+IR
Sbjct: 240 QKGLIQSDQELFSSPNATDTIP-LVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIR 298
Query: 321 KNCRAVNS 328
NCR VNS
Sbjct: 299 LNCRVVNS 306
>pdb|2YLJ|A Chain A, Horse Radish Peroxidase, Mutant S167y
Length = 306
Score = 293 bits (750), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 161/308 (52%), Positives = 204/308 (66%), Gaps = 8/308 (2%)
Query: 27 QLSTNFYSKTCPNVLQIVRREVQKAIKVEMRMAASLIRLHFHDCFVNGCDASVLLDGSDS 86
QL+ FY +CPNV IVR + ++ + R+AAS++RLHFHDCFVNGCDAS+LLD + S
Sbjct: 1 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTS 60
Query: 87 ---EKFAAPNRNSARGFEVIDAIKTAVERQCSGVVSCADILAIAARDSVLLSGGPTWKVL 143
EK A N NSARGF VID +K AVE C VSCAD+L IAA+ SV L+GGP+W+V
Sbjct: 61 FRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVP 120
Query: 144 LGRRDGLVANQTGANA-LPSPFEGLNILTAKFAAVGLN-ITDLVSLSGGAHTIGLAKCAF 201
LGRRD L A ANA LP+PF L L F VGLN +DLV+L GG HT G +C F
Sbjct: 121 LGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALYGG-HTFGKNQCRF 179
Query: 202 FSNRLSNFSGTGAPDATMDTSLVSELRSLCA-NGDGNNTAPLDRNSIDLFDNHYFQNLIN 260
+RL NFS TG PD T++T+ + LR LC NG+ + D + +FDN Y+ NL
Sbjct: 180 IMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEE 239
Query: 261 NKGLLSSDQILYSSDEAKSTTKSLVESYSSNSNLFFANFVNSMIKMGNVSPLTGTNGEIR 320
KGL+ SDQ L+SS A T LV S+++++ FF FV +M +MGN++PLTGT G+IR
Sbjct: 240 QKGLIQSDQELFSSPNATDTIP-LVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIR 298
Query: 321 KNCRAVNS 328
NCR VNS
Sbjct: 299 LNCRVVNS 306
>pdb|4ATJ|A Chain A, Distal Heme Pocket Mutant (H42e) Of Recombinant
Horseradish Peroxidase In Complex With Benzhydroxamic
Acid
pdb|4ATJ|B Chain B, Distal Heme Pocket Mutant (H42e) Of Recombinant
Horseradish Peroxidase In Complex With Benzhydroxamic
Acid
Length = 309
Score = 292 bits (748), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 161/308 (52%), Positives = 204/308 (66%), Gaps = 8/308 (2%)
Query: 27 QLSTNFYSKTCPNVLQIVRREVQKAIKVEMRMAASLIRLHFHDCFVNGCDASVLLDGSDS 86
QL+ FY +CPNV IVR + ++ + R+AAS++RLHF DCFVNGCDAS+LLD + S
Sbjct: 2 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFEDCFVNGCDASILLDNTTS 61
Query: 87 ---EKFAAPNRNSARGFEVIDAIKTAVERQCSGVVSCADILAIAARDSVLLSGGPTWKVL 143
EK A N NSARGF VID +K AVE C VSCAD+L IAA+ SV L+GGP+W+V
Sbjct: 62 FRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVP 121
Query: 144 LGRRDGLVANQTGANA-LPSPFEGLNILTAKFAAVGLN-ITDLVSLSGGAHTIGLAKCAF 201
LGRRD L A ANA LP+PF L L F VGLN +DLV+LSGG HT G +C F
Sbjct: 122 LGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGG-HTFGKNQCRF 180
Query: 202 FSNRLSNFSGTGAPDATMDTSLVSELRSLCA-NGDGNNTAPLDRNSIDLFDNHYFQNLIN 260
+RL NFS TG PD T++T+ + LR LC NG+ + D + +FDN Y+ NL
Sbjct: 181 IMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEE 240
Query: 261 NKGLLSSDQILYSSDEAKSTTKSLVESYSSNSNLFFANFVNSMIKMGNVSPLTGTNGEIR 320
KGL+ SDQ L+SS A T LV S+++++ FF FV +M +MGN++PLTGT G+IR
Sbjct: 241 QKGLIQSDQELFSSPNATDTIP-LVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIR 299
Query: 321 KNCRAVNS 328
NCR VNS
Sbjct: 300 LNCRVVNS 307
>pdb|1GX2|A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With
Benzhydroxamic Acid
pdb|1GX2|B Chain B, Recombinant Horseradish Peroxidase Phe209ser Complex With
Benzhydroxamic Acid
Length = 309
Score = 291 bits (746), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 161/308 (52%), Positives = 204/308 (66%), Gaps = 8/308 (2%)
Query: 27 QLSTNFYSKTCPNVLQIVRREVQKAIKVEMRMAASLIRLHFHDCFVNGCDASVLLDGSDS 86
QL+ FY +CPNV IVR + ++ + R+AAS++RLHFHDCFVNGCDAS+LLD + S
Sbjct: 2 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTS 61
Query: 87 ---EKFAAPNRNSARGFEVIDAIKTAVERQCSGVVSCADILAIAARDSVLLSGGPTWKVL 143
EK A N NSARGF VID +K AVE C VSCAD+L IAA+ SV L+GGP+W+V
Sbjct: 62 FRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVP 121
Query: 144 LGRRDGLVANQTGANA-LPSPFEGLNILTAKFAAVGLN-ITDLVSLSGGAHTIGLAKCAF 201
LGRRD L A ANA LP+PF L L F VGLN +DLV+LSGG HT G +C
Sbjct: 122 LGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGG-HTFGKNQCRS 180
Query: 202 FSNRLSNFSGTGAPDATMDTSLVSELRSLCA-NGDGNNTAPLDRNSIDLFDNHYFQNLIN 260
+RL NFS TG PD T++T+ + LR LC NG+ + D + +FDN Y+ NL
Sbjct: 181 IMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEE 240
Query: 261 NKGLLSSDQILYSSDEAKSTTKSLVESYSSNSNLFFANFVNSMIKMGNVSPLTGTNGEIR 320
KGL+ SDQ L+SS A T LV S+++++ FF FV +M +MGN++PLTGT G+IR
Sbjct: 241 QKGLIQSDQELFSSPNATDTIP-LVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIR 299
Query: 321 KNCRAVNS 328
NCR VNS
Sbjct: 300 LNCRVVNS 307
>pdb|1KZM|A Chain A, Distal Heme Pocket Mutant (r38s/h42e) Of Recombinant
Horseradish Peroxidase C (hrp C)
Length = 308
Score = 289 bits (740), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 160/308 (51%), Positives = 203/308 (65%), Gaps = 8/308 (2%)
Query: 27 QLSTNFYSKTCPNVLQIVRREVQKAIKVEMRMAASLIRLHFHDCFVNGCDASVLLDGSDS 86
QL+ FY +CPNV IVR + ++ + R+AAS++ LHF DCFVNGCDAS+LLD + S
Sbjct: 1 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILSLHFEDCFVNGCDASILLDNTTS 60
Query: 87 ---EKFAAPNRNSARGFEVIDAIKTAVERQCSGVVSCADILAIAARDSVLLSGGPTWKVL 143
EK A N NSARGF VID +K AVE C VSCAD+L IAA+ SV L+GGP+W+V
Sbjct: 61 FRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVP 120
Query: 144 LGRRDGLVANQTGANA-LPSPFEGLNILTAKFAAVGLN-ITDLVSLSGGAHTIGLAKCAF 201
LGRRD L A ANA LP+PF L L F VGLN +DLV+LSGG HT G +C F
Sbjct: 121 LGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGG-HTFGKNQCRF 179
Query: 202 FSNRLSNFSGTGAPDATMDTSLVSELRSLCA-NGDGNNTAPLDRNSIDLFDNHYFQNLIN 260
+RL NFS TG PD T++T+ + LR LC NG+ + D + +FDN Y+ NL
Sbjct: 180 IMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEE 239
Query: 261 NKGLLSSDQILYSSDEAKSTTKSLVESYSSNSNLFFANFVNSMIKMGNVSPLTGTNGEIR 320
KGL+ SDQ L+SS A T LV S+++++ FF FV +M +MGN++PLTGT G+IR
Sbjct: 240 QKGLIQSDQELFSSPNATDTIP-LVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIR 298
Query: 321 KNCRAVNS 328
NCR VNS
Sbjct: 299 LNCRVVNS 306
>pdb|1SCH|A Chain A, Peanut Peroxidase
pdb|1SCH|B Chain B, Peanut Peroxidase
Length = 294
Score = 288 bits (737), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 156/305 (51%), Positives = 201/305 (65%), Gaps = 17/305 (5%)
Query: 28 LSTNFYSKTCPNVLQIVRREVQKAIKVEMRMAASLIRLHFHDCFVNGCDASVLLDGSDS- 86
LS+NFY+ CPN L ++ V A+ E RM ASL+RLHFHDCFV GCDASVLLD + +
Sbjct: 2 LSSNFYATKCPNALSTIKSAVNSAVAKEARMGASLLRLHFHDCFVQGCDASVLLDDTSNF 61
Query: 87 --EKFAAPNRNSARGFEVIDAIKTAVERQCSGVVSCADILAIAARDSVLLSGGPTWKVLL 144
EK A PN NS RGFEVID IK+ VE C GVVSCADILA+AARDSV+ GG +W VLL
Sbjct: 62 TGEKTAGPNANSIRGFEVIDTIKSQVESLCPGVVSCADILAVAARDSVVALGGASWNVLL 121
Query: 145 GRRDGLVANQTGANA-LPSPFEGLNILTAKFAAVGLNITDLVSLSGGAHTIGLAKCAFFS 203
GRRD A+ + AN+ LP+PF L+ L + F+ G +LV+LS GAHTIG A+C F
Sbjct: 122 GRRDSTTASLSSANSDLPAPFFNLSGLISAFSNKGFTTKELVTLS-GAHTIGQAQCTAFR 180
Query: 204 NRLSNFSGTGAPDATMDTSLVSELRSLCAN-GDGNNTAPLDRNSIDLFDNHYFQNLINNK 262
R+ N ++ +D + L++ C + G N +P D + + FDN Y+ NL N K
Sbjct: 181 TRIYN-------ESNIDPTYAKSLQANCPSVGGDTNLSPFDVTTPNKFDNAYYINLRNKK 233
Query: 263 GLLSSDQILYSSDEAKSTTKSLVESYSSNSNLFFANFVNSMIKMGNVSPLTGTNGEIRKN 322
GLL SDQ L++ +T S V +YS+N+ F +F N+MIKMGN+SPLTGT+G+IR N
Sbjct: 234 GLLHSDQQLFNG----VSTDSQVTAYSNNAATFNTDFGNAMIKMGNLSPLTGTSGQIRTN 289
Query: 323 CRAVN 327
CR N
Sbjct: 290 CRKTN 294
>pdb|1FHF|A Chain A, The Structure Of Soybean Peroxidase
pdb|1FHF|B Chain B, The Structure Of Soybean Peroxidase
pdb|1FHF|C Chain C, The Structure Of Soybean Peroxidase
Length = 304
Score = 285 bits (730), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 166/306 (54%), Positives = 202/306 (66%), Gaps = 8/306 (2%)
Query: 27 QLSTNFYSKTCPNVLQIVRREVQKAIKVEMRMAASLIRLHFHDCFVNGCDASVLLDGSD- 85
QL+ FY +TCPN+ IV + A + R+ ASL+RLHFHDCFV GCD SVLL+ +D
Sbjct: 1 QLTPTFYRETCPNLFPIVFGVIFDASFTDPRIGASLMRLHFHDCFVQGCDGSVLLNNTDT 60
Query: 86 --SEKFAAPNRNSARGFEVIDAIKTAVERQCSGVVSCADILAIAARDSVLLSGGPTWKVL 143
SE+ A PN NS RG +V++ IKTAVE C VSCADILAIAA + +L GGP W V
Sbjct: 61 IESEQDALPNINSIRGLDVVNDIKTAVENSCPDTVSCADILAIAAEIASVLGGGPGWPVP 120
Query: 144 LGRRDGLVANQTGANA-LPSPFEGLNILTAKFAAVGLNITDLVSLSGGAHTIGLAKCAFF 202
LGRRD L AN+T AN LP+PF L L A FA GLN DLV+LSGG HT G A+C+ F
Sbjct: 121 LGRRDSLTANRTLANQNLPAPFFNLTQLKASFAVQGLNTLDLVTLSGG-HTFGRARCSTF 179
Query: 203 SNRLSNFSGTGAPDATMDTSLVSELRSLCA-NGDGNNTAPLDRNSIDLFDNHYFQNLINN 261
NRL NFS TG PD T++T+ + LR+ C N G+N LD ++ D FDN Y+ NL+
Sbjct: 180 INRLYNFSNTGNPDPTLNTTYLEVLRARCPQNATGDNLTNLDLSTPDQFDNRYYSNLLQL 239
Query: 262 KGLLSSDQILYSSDEAKSTTKSLVESYSSNSNLFFANFVNSMIKMGNVSPLTGTNGEIRK 321
GLL SDQ L+S+ A T +V S+SSN N FF+NF SMIKMGN+ LTG GEIR
Sbjct: 240 NGLLQSDQELFSTPGAD--TIPIVNSFSSNQNTFFSNFRVSMIKMGNIGVLTGDEGEIRL 297
Query: 322 NCRAVN 327
C VN
Sbjct: 298 QCNFVN 303
>pdb|1BGP|A Chain A, Crystal Structure Of Barley Grain Peroxidase 1
Length = 309
Score = 231 bits (590), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 136/313 (43%), Positives = 193/313 (61%), Gaps = 21/313 (6%)
Query: 24 VKSQLSTNFYSKTCPNVLQIVRREVQKAIKVEMRMAASLIRLHFHDCFVNGCDASVLLDG 83
V LS +FY +TCP IVR VQ+A++ ++ +AA L+RLHFHDCFV GCDASVLLDG
Sbjct: 5 VAPGLSFDFYWQTCPRAESIVREFVQEAVRKDIGLAAGLLRLHFHDCFVQGCDASVLLDG 64
Query: 84 SDS---EKFAAPN---RNSARGFEVIDAIKTAVERQCSG-VVSCADILAIAARDSVLLSG 136
S + E+ A PN R SA F+ ++ I+ +ER+C G VVSC+DILA+AARDSV++SG
Sbjct: 65 SATGPGEQQAPPNLTLRPSA--FKAVNDIRDRLERECRGAVVSCSDILALAARDSVVVSG 122
Query: 137 GPTWKVLLGRRD--GLVANQTGANALPSPFEGLNILTAKFAAVGLNITDLVSLSGGAHTI 194
GP ++V LGRRD + Q + LP P + L A +GL+ TDLV++SGG HTI
Sbjct: 123 GPDYRVPLGRRDSRSFASTQDVLSDLPGPSSNVQSLLALLGRLGLDATDLVTISGG-HTI 181
Query: 195 GLAKCAFFSNRLSNFSGTGAPDATMDTSLVSELRSLCANGDGNNTAPLDRNSIDLFDNHY 254
GLA C+ F +RL PD T+ + +S L+ C + LD + ++FDN Y
Sbjct: 182 GLAHCSSFEDRL-----FPRPDPTISPTFLSRLKRTCPAKGTDRRTVLDVRTPNVFDNKY 236
Query: 255 FQNLINNKGLLSSDQILYSSDEAKSTTKSLVESYSSNSNLFFANFVNSMIKMGNVSPLTG 314
+ +L+N +GL SDQ L+++ + T+ +VE ++ + FF F S+ KMG + T
Sbjct: 237 YIDLVNREGLFVSDQDLFTN----AITRPIVERFAQSQQDFFEQFGVSIGKMGQMRVRTS 292
Query: 315 TNGEIRKNCRAVN 327
GE+R+NC N
Sbjct: 293 DQGEVRRNCSVRN 305
>pdb|3HDL|A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From
Royal Palm Tree
Length = 304
Score = 216 bits (550), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 134/308 (43%), Positives = 178/308 (57%), Gaps = 12/308 (3%)
Query: 28 LSTNFYSKTCPNVLQIVRREVQKAIKVEMRMAASLIRLHFHDCFVNGCDASVLLDGS--- 84
L FY+ +CP +V++ V A +A LIR+HFHDCFV GCDASVLLD +
Sbjct: 2 LQIGFYNTSCPTAESLVQQAVAAAFANNSGIAPGLIRMHFHDCFVRGCDASVLLDSTANN 61
Query: 85 DSEKFAAPNRNSARGFEVIDAIKTAVERQCSGVVSCADILAIAARDSVLLSGGPTWKVLL 144
+EK A PN S RGFEVI A K+AVE C VSCADILA AARDS L+G T++V
Sbjct: 62 TAEKDAIPNNPSLRGFEVITAAKSAVEAACPQTVSCADILAFAARDSANLAGNITYQVPS 121
Query: 145 GRRDGLVANQTGANA-LPSPFEGLNILTAKFAAVGLNITDLVSLSGGAHTIGLAKCAFFS 203
GRRDG V+ + ANA +PSP L FA L ++V+LS GAH+IG+A C+ F+
Sbjct: 122 GRRDGTVSLASEANAQIPSPLFNATQLINSFANKTLTADEMVTLS-GAHSIGVAHCSSFT 180
Query: 204 NRLSNFSGTGAPDATMDTSLVSELRSLCANGDGN---NTAPLDRNSIDLFDNHYFQNLIN 260
NRL NF+ D T+ S + LR+ C T LD + + DN Y+ +
Sbjct: 181 NRLYNFNSGSGIDPTLSPSYAALLRNTCPANSTRFTPITVSLDIITPSVLDNMYYTGVQL 240
Query: 261 NKGLLSSDQILYSSDEAKSTTKSLVESYSSNSNLFFANFVNSMIKMGNVSPLTGTNGEIR 320
GLL+SDQ L + ++ + V++ + N + + F +M+KMG + LTGT GEIR
Sbjct: 241 TLGLLTSDQALVT----EANLSAAVKANAMNLTAWASKFAQAMVKMGQIEVLTGTQGEIR 296
Query: 321 KNCRAVNS 328
NC VNS
Sbjct: 297 TNCSVVNS 304
>pdb|1APX|A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase
pdb|1APX|B Chain B, Crystal Structure Of Recombinant Ascorbate Peroxidase
pdb|1APX|C Chain C, Crystal Structure Of Recombinant Ascorbate Peroxidase
pdb|1APX|D Chain D, Crystal Structure Of Recombinant Ascorbate Peroxidase
Length = 249
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 122/288 (42%), Gaps = 58/288 (20%)
Query: 35 KTCPNVLQIVRREVQKAIK------VEMRMAASLIRLHFHDCFVNGCDASVLLDGS-DSE 87
K+ P V ++ ++KA + E + A ++RL +H D+ G +
Sbjct: 2 KSYPTVSPDYQKAIEKAKRKLRGFIAEKKCAPLILRLAWHSA--GTFDSKTKTGGPFGTI 59
Query: 88 KFAAPNRNSAR-GFEVIDAIKTAVERQCSGVVSCADILAIAARDSVLLSGGPTWKVLLGR 146
K A + A G ++ + ++ Q +VS AD +A +V ++GGP GR
Sbjct: 60 KHQAELAHGANNGLDIAVRLLEPIKEQFP-IVSYADFYQLAGVVAVEITGGPEVPFHPGR 118
Query: 147 RDGLVANQTGANALPSPFEGLNILTAKFA-AVGLNITDLVSLSGGAHTIGLAKCAFFSNR 205
D G LP +G + L F A+GL+ D+V+LSGG HTIG A
Sbjct: 119 EDKPEPPPEG--RLPDATKGSDHLRDVFGKAMGLSDQDIVALSGG-HTIGAA-----HKE 170
Query: 206 LSNFSGTGAPDATMDTSLVSELRSLCANGDGNNTAPLDRNSIDLFDNHYFQNLINNK--G 263
S F G P N + +FDN YF L+ + G
Sbjct: 171 RSGFEG-----------------------------PWTSNPL-IFDNSYFTELLTGEKDG 200
Query: 264 L--LSSDQILYSSDEAKSTTKSLVESYSSNSNLFFANFVNSMIKMGNV 309
L L SD+ L + S + LVE Y+++ ++FFA++ + +K+ +
Sbjct: 201 LLQLPSDKALLTD----SVFRPLVEKYAADEDVFFADYAEAHLKLSEL 244
>pdb|2CL4|X Chain X, Ascorbate Peroxidase R172a Mutant
Length = 261
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 118/289 (40%), Gaps = 60/289 (20%)
Query: 35 KTCPNVLQIVRREVQKAIK------VEMRMAASLIRLHFHDC--FVNGCDASVLLDGSDS 86
K+ P V ++ V+KA K E R A ++RL +H F G +
Sbjct: 14 KSYPTVSADYQKAVEKAKKKLRGFIAEKRCAPLMLRLAWHSAGTFDKGTKTGGPFG---T 70
Query: 87 EKFAAPNRNSAR-GFEVIDAIKTAVERQCSGVVSCADILAIAARDSVLLSGGPTWKVLLG 145
K A +SA G ++ + ++ + ++S AD +A +V ++GGP G
Sbjct: 71 IKHPAELAHSANNGLDIAVRLLEPLKAEFP-ILSYADFYQLAGVVAVEVTGGPEVPFHPG 129
Query: 146 RRDGLVANQTGANALPSPFEGLNILTAKFA-AVGLNITDLVSLSGGAHTIGLAKCAFFSN 204
R D G LP +G + L F A+GL D+V+LSGG HTIG A
Sbjct: 130 REDKPEPPPEGR--LPDATKGSDHLRDVFGKAMGLTDQDIVALSGG-HTIGAA-----HK 181
Query: 205 RLSNFSGTGAPDATMDTSLVSELRSLCANGDGNNTAPLDRNSIDLFDNHYFQNLI--NNK 262
S F G P N + +FDN YF L+ +
Sbjct: 182 EASGFEG-----------------------------PWTSNPL-IFDNSYFTELLSGEKE 211
Query: 263 GL--LSSDQILYSSDEAKSTTKSLVESYSSNSNLFFANFVNSMIKMGNV 309
GL L SD+ L S + LV+ Y+++ + FFA++ + K+ +
Sbjct: 212 GLLQLPSDKALLSD----PVFRPLVDKYAADEDAFFADYAEAHQKLSEL 256
>pdb|2XIF|A Chain A, The Structure Of Ascorbate Peroxidase Compound Ii
pdb|2XIH|A Chain A, The Structure Of Ascorbate Peroxidase Compound Iii
pdb|2XI6|A Chain A, The Structure Of Ascorbate Peroxidase Compound I
pdb|2XJ6|A Chain A, The Structure Of Ferrous Ascorbate Peroxidase
Length = 249
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 118/289 (40%), Gaps = 60/289 (20%)
Query: 35 KTCPNVLQIVRREVQKAIK------VEMRMAASLIRLHFHDC--FVNGCDASVLLDGSDS 86
K+ P V ++ V+KA K E R A ++RL +H F G +
Sbjct: 2 KSYPTVSADYQKAVEKAKKKLRGFIAEKRCAPLMLRLAWHSAGTFDKGTKTGGPFG---T 58
Query: 87 EKFAAPNRNSAR-GFEVIDAIKTAVERQCSGVVSCADILAIAARDSVLLSGGPTWKVLLG 145
K A +SA G ++ + ++ + ++S AD +A +V ++GGP G
Sbjct: 59 IKHPAELAHSANNGLDIAVRLLEPLKAEFP-ILSYADFYQLAGVVAVEVTGGPEVPFHPG 117
Query: 146 RRDGLVANQTGANALPSPFEGLNILTAKFA-AVGLNITDLVSLSGGAHTIGLAKCAFFSN 204
R D G LP +G + L F A+GL D+V+LSGG HTIG A
Sbjct: 118 REDKPEPPPEGR--LPDATKGSDHLRDVFGKAMGLTDQDIVALSGG-HTIGAA-----HK 169
Query: 205 RLSNFSGTGAPDATMDTSLVSELRSLCANGDGNNTAPLDRNSIDLFDNHYFQNLI--NNK 262
S F G P N + +FDN YF L+ +
Sbjct: 170 ERSGFEG-----------------------------PWTSNPL-IFDNSYFTELLSGEKE 199
Query: 263 GL--LSSDQILYSSDEAKSTTKSLVESYSSNSNLFFANFVNSMIKMGNV 309
GL L SD+ L S + LV+ Y+++ + FFA++ + K+ +
Sbjct: 200 GLLQLPSDKALLSD----PVFRPLVDKYAADEDAFFADYAEAHQKLSEL 244
>pdb|1OAF|A Chain A, Ascobate Peroxidase From Soybean Cytosol In Complex With
Ascorbate
pdb|1OAG|A Chain A, Ascorbate Peroxidase From Soybean Cytosol
pdb|1V0H|X Chain X, Ascobate Peroxidase From Soybean Cytosol In Complex With
Salicylhydroxamic Acid
pdb|2GHH|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2GHK|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
Length = 261
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 118/289 (40%), Gaps = 60/289 (20%)
Query: 35 KTCPNVLQIVRREVQKAIK------VEMRMAASLIRLHFHDC--FVNGCDASVLLDGSDS 86
K+ P V ++ V+KA K E R A ++RL +H F G +
Sbjct: 14 KSYPTVSADYQKAVEKAKKKLRGFIAEKRCAPLMLRLAWHSAGTFDKGTKTGGPFG---T 70
Query: 87 EKFAAPNRNSAR-GFEVIDAIKTAVERQCSGVVSCADILAIAARDSVLLSGGPTWKVLLG 145
K A +SA G ++ + ++ + ++S AD +A +V ++GGP G
Sbjct: 71 IKHPAELAHSANNGLDIAVRLLEPLKAEFP-ILSYADFYQLAGVVAVEVTGGPEVPFHPG 129
Query: 146 RRDGLVANQTGANALPSPFEGLNILTAKFA-AVGLNITDLVSLSGGAHTIGLAKCAFFSN 204
R D G LP +G + L F A+GL D+V+LSGG HTIG A
Sbjct: 130 REDKPEPPPEGR--LPDATKGSDHLRDVFGKAMGLTDQDIVALSGG-HTIGAA-----HK 181
Query: 205 RLSNFSGTGAPDATMDTSLVSELRSLCANGDGNNTAPLDRNSIDLFDNHYFQNLI--NNK 262
S F G P N + +FDN YF L+ +
Sbjct: 182 ERSGFEG-----------------------------PWTSNPL-IFDNSYFTELLSGEKE 211
Query: 263 GL--LSSDQILYSSDEAKSTTKSLVESYSSNSNLFFANFVNSMIKMGNV 309
GL L SD+ L S + LV+ Y+++ + FFA++ + K+ +
Sbjct: 212 GLLQLPSDKALLSD----PVFRPLVDKYAADEDAFFADYAEAHQKLSEL 256
>pdb|2VCF|X Chain X, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean
Ascorbate Peroxidase
Length = 264
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 118/289 (40%), Gaps = 60/289 (20%)
Query: 35 KTCPNVLQIVRREVQKAIK------VEMRMAASLIRLHFHDC--FVNGCDASVLLDGSDS 86
K+ P V ++ V+KA K E R A ++RL +H F G +
Sbjct: 14 KSYPTVSADYQKAVEKAKKKLRGFIAEKRCAPLMLRLAWHSAGTFDKGTKTGGPFG---T 70
Query: 87 EKFAAPNRNSAR-GFEVIDAIKTAVERQCSGVVSCADILAIAARDSVLLSGGPTWKVLLG 145
K A +SA G ++ + ++ + ++S AD +A +V ++GGP G
Sbjct: 71 IKHPAELAHSANNGLDIAVRLLEPLKAEFP-ILSYADFYQLAGVVAVEVTGGPEVPFHPG 129
Query: 146 RRDGLVANQTGANALPSPFEGLNILTAKFA-AVGLNITDLVSLSGGAHTIGLAKCAFFSN 204
R D G LP +G + L F A+GL D+V+LSGG HTIG A
Sbjct: 130 REDKPEPPPEGR--LPDATKGSDHLRDVFGKAMGLTDQDIVALSGG-HTIGAA-----HK 181
Query: 205 RLSNFSGTGAPDATMDTSLVSELRSLCANGDGNNTAPLDRNSIDLFDNHYFQNLI--NNK 262
S F G P N + +FDN YF L+ +
Sbjct: 182 ERSGFEG-----------------------------PWTSNPL-IFDNSYFTELLSGEKE 211
Query: 263 GL--LSSDQILYSSDEAKSTTKSLVESYSSNSNLFFANFVNSMIKMGNV 309
GL L SD+ L S + LV+ Y+++ + FFA++ + K+ +
Sbjct: 212 GLLQLPSDKALLSD----PVFRPLVDKYAADEDAFFADYAEAHQKLSEL 256
>pdb|2GGN|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2GHC|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2GHD|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2GHE|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2VCN|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean
Ascorbate Peroxidase Mutant W41a
pdb|2VNX|X Chain X, Crystal Structure Of Soybean Ascorbate Peroxidase Mutant
W41a After Exposure To A High Dose Of X-Rays
pdb|2VNZ|X Chain X, Crystal Structure Of Dithinonite Reduced Soybean Ascorbate
Peroxidase Mutant W41a.
pdb|2VO2|X Chain X, Crystal Structure Of Soybean Ascorbate Peroxidase Mutant
W41a Subjected To Low Dose X-Rays
pdb|2WD4|A Chain A, Ascorbate Peroxidase As A Heme Oxygenase: W41a Variant
Product With T-Butyl Peroxide
Length = 261
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 83/198 (41%), Gaps = 47/198 (23%)
Query: 117 VVSCADILAIAARDSVLLSGGPTWKVLLGRRDGLVANQTGANALPSPFEGLNILTAKFA- 175
++S AD +A +V ++GGP GR D G LP +G + L F
Sbjct: 101 ILSYADFYQLAGVVAVEVTGGPEVPFHPGREDKPEPPPEGR--LPDATKGSDHLRDVFGK 158
Query: 176 AVGLNITDLVSLSGGAHTIGLAKCAFFSNRLSNFSGTGAPDATMDTSLVSELRSLCANGD 235
A+GL D+V+LSGG HTIG A S F G
Sbjct: 159 AMGLTDQDIVALSGG-HTIGAA-----HKERSGFEG------------------------ 188
Query: 236 GNNTAPLDRNSIDLFDNHYFQNLI--NNKGL--LSSDQILYSSDEAKSTTKSLVESYSSN 291
P N + +FDN YF L+ +GL L SD+ L S + LV+ Y+++
Sbjct: 189 -----PWTSNPL-IFDNSYFTELLSGEKEGLLQLPSDKALLSD----PVFRPLVDKYAAD 238
Query: 292 SNLFFANFVNSMIKMGNV 309
+ FFA++ + K+ +
Sbjct: 239 EDAFFADYAEAHQKLSEL 256
>pdb|3ZCG|A Chain A, Ascorbate Peroxidase W41a-h42c Mutant
Length = 261
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 83/198 (41%), Gaps = 47/198 (23%)
Query: 117 VVSCADILAIAARDSVLLSGGPTWKVLLGRRDGLVANQTGANALPSPFEGLNILTAKFA- 175
++S AD +A +V ++GGP GR D G LP +G + L F
Sbjct: 101 ILSYADFYQLAGVVAVEVTGGPEVPFHPGREDKPEPPPEGR--LPDATKGSDHLRDVFGK 158
Query: 176 AVGLNITDLVSLSGGAHTIGLAKCAFFSNRLSNFSGTGAPDATMDTSLVSELRSLCANGD 235
A+GL D+V+LSGG HTIG A S F G
Sbjct: 159 AMGLTDQDIVALSGG-HTIGAA-----HKERSGFEG------------------------ 188
Query: 236 GNNTAPLDRNSIDLFDNHYFQNLI--NNKGL--LSSDQILYSSDEAKSTTKSLVESYSSN 291
P N + +FDN YF L+ +GL L SD+ L S + LV+ Y+++
Sbjct: 189 -----PWTSNPL-IFDNSYFTELLSGEKEGLLQLPSDKALLSD----PVFRPLVDKYAAD 238
Query: 292 SNLFFANFVNSMIKMGNV 309
+ FFA++ + K+ +
Sbjct: 239 EDAFFADYAEAHQKLSEL 256
>pdb|3ZCH|A Chain A, Ascorbate Peroxidase W41a-h42m Mutant
Length = 261
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 83/198 (41%), Gaps = 47/198 (23%)
Query: 117 VVSCADILAIAARDSVLLSGGPTWKVLLGRRDGLVANQTGANALPSPFEGLNILTAKFA- 175
++S AD +A +V ++GGP GR D G LP +G + L F
Sbjct: 101 ILSYADFYQLAGVVAVEVTGGPEVPFHPGREDKPEPPPEGR--LPDATKGSDHLRDVFGK 158
Query: 176 AVGLNITDLVSLSGGAHTIGLAKCAFFSNRLSNFSGTGAPDATMDTSLVSELRSLCANGD 235
A+GL D+V+LSGG HTIG A S F G
Sbjct: 159 AMGLTDQDIVALSGG-HTIGAA-----HKERSGFEG------------------------ 188
Query: 236 GNNTAPLDRNSIDLFDNHYFQNLI--NNKGL--LSSDQILYSSDEAKSTTKSLVESYSSN 291
P N + +FDN YF L+ +GL L SD+ L S + LV+ Y+++
Sbjct: 189 -----PWTSNPL-IFDNSYFTELLSGEKEGLLQLPSDKALLSD----PVFRPLVDKYAAD 238
Query: 292 SNLFFANFVNSMIKMGNV 309
+ FFA++ + K+ +
Sbjct: 239 EDAFFADYAEAHQKLSEL 256
>pdb|2Y6B|A Chain A, Ascorbate Peroxidase R38k Mutant
Length = 249
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 118/289 (40%), Gaps = 60/289 (20%)
Query: 35 KTCPNVLQIVRREVQKAIK------VEMRMAASLIRLHFHDC--FVNGCDASVLLDGSDS 86
K+ P V ++ V+KA K E R A +++L +H F G +
Sbjct: 2 KSYPTVSADYQKAVEKAKKKLRGFIAEKRCAPLMLKLAWHSAGTFDKGTKTGGPFG---T 58
Query: 87 EKFAAPNRNSAR-GFEVIDAIKTAVERQCSGVVSCADILAIAARDSVLLSGGPTWKVLLG 145
K A +SA G ++ + ++ + ++S AD +A +V ++GGP G
Sbjct: 59 IKHPAELAHSANNGLDIAVRLLEPLKAEFP-ILSYADFYQLAGVVAVEVTGGPEVPFHPG 117
Query: 146 RRDGLVANQTGANALPSPFEGLNILTAKFA-AVGLNITDLVSLSGGAHTIGLAKCAFFSN 204
R D G LP +G + L F A+GL D+V+LSGG HTIG A
Sbjct: 118 REDKPEPPPEGR--LPDATKGSDHLRDVFGKAMGLTDQDIVALSGG-HTIGAA-----HK 169
Query: 205 RLSNFSGTGAPDATMDTSLVSELRSLCANGDGNNTAPLDRNSIDLFDNHYFQNLI--NNK 262
S F G P N + +FDN YF L+ +
Sbjct: 170 ERSGFEG-----------------------------PWTSNPL-IFDNSYFTELLSGEKE 199
Query: 263 GL--LSSDQILYSSDEAKSTTKSLVESYSSNSNLFFANFVNSMIKMGNV 309
GL L SD+ L S + LV+ Y+++ + FFA++ + K+ +
Sbjct: 200 GLLQLPSDKALLSD----PVFRPLVDKYAADEDAFFADYAEAHQKLSEL 244
>pdb|3ZCY|A Chain A, Ascorbate Peroxidase W41a-h42y Mutant
Length = 249
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 83/198 (41%), Gaps = 47/198 (23%)
Query: 117 VVSCADILAIAARDSVLLSGGPTWKVLLGRRDGLVANQTGANALPSPFEGLNILTAKFA- 175
++S AD +A +V ++GGP GR D G LP +G + L F
Sbjct: 89 ILSYADFYQLAGVVAVEVTGGPEVPFHPGREDKPEPPPEGR--LPDATKGSDHLRDVFGK 146
Query: 176 AVGLNITDLVSLSGGAHTIGLAKCAFFSNRLSNFSGTGAPDATMDTSLVSELRSLCANGD 235
A+GL D+V+LSGG HTIG A S F G
Sbjct: 147 AMGLTDQDIVALSGG-HTIGAA-----HKERSGFEG------------------------ 176
Query: 236 GNNTAPLDRNSIDLFDNHYFQNLI--NNKGL--LSSDQILYSSDEAKSTTKSLVESYSSN 291
P N + +FDN YF L+ +GL L SD+ L S + LV+ Y+++
Sbjct: 177 -----PWTSNPL-IFDNSYFTELLSGEKEGLLQLPSDKALLSD----PVFRPLVDKYAAD 226
Query: 292 SNLFFANFVNSMIKMGNV 309
+ FFA++ + K+ +
Sbjct: 227 EDAFFADYAEAHQKLSEL 244
>pdb|2VCS|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean
Ascorbate Peroxidase Mutant H42a
Length = 261
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 83/198 (41%), Gaps = 47/198 (23%)
Query: 117 VVSCADILAIAARDSVLLSGGPTWKVLLGRRDGLVANQTGANALPSPFEGLNILTAKFA- 175
++S AD +A +V ++GGP GR D G LP +G + L F
Sbjct: 101 ILSYADFYQLAGVVAVEVTGGPEVPFHPGREDKPEPPPEGR--LPDATKGSDHLRDVFGK 158
Query: 176 AVGLNITDLVSLSGGAHTIGLAKCAFFSNRLSNFSGTGAPDATMDTSLVSELRSLCANGD 235
A+GL D+V+LSGG HTIG A S F G
Sbjct: 159 AMGLTDQDIVALSGG-HTIGAA-----HKERSGFEG------------------------ 188
Query: 236 GNNTAPLDRNSIDLFDNHYFQNLI--NNKGL--LSSDQILYSSDEAKSTTKSLVESYSSN 291
P N + +FDN YF L+ +GL L SD+ L S + LV+ Y+++
Sbjct: 189 -----PWTSNPL-IFDNSYFTELLSGEKEGLLQLPSDKALLSD----PVFRPLVDKYAAD 238
Query: 292 SNLFFANFVNSMIKMGNV 309
+ FFA++ + K+ +
Sbjct: 239 EDAFFADYAEAHQKLSEL 256
>pdb|2Y6A|A Chain A, Ascorbate Peroxidase R38a Mutant
Length = 249
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 83/198 (41%), Gaps = 47/198 (23%)
Query: 117 VVSCADILAIAARDSVLLSGGPTWKVLLGRRDGLVANQTGANALPSPFEGLNILTAKFA- 175
++S AD +A +V ++GGP GR D G LP +G + L F
Sbjct: 89 ILSYADFYQLAGVVAVEVTGGPEVPFHPGREDKPEPPPEGR--LPDATKGSDHLRDVFGK 146
Query: 176 AVGLNITDLVSLSGGAHTIGLAKCAFFSNRLSNFSGTGAPDATMDTSLVSELRSLCANGD 235
A+GL D+V+LSGG HTIG A S F G
Sbjct: 147 AMGLTDQDIVALSGG-HTIGAA-----HKERSGFEG------------------------ 176
Query: 236 GNNTAPLDRNSIDLFDNHYFQNLI--NNKGL--LSSDQILYSSDEAKSTTKSLVESYSSN 291
P N + +FDN YF L+ +GL L SD+ L S + LV+ Y+++
Sbjct: 177 -----PWTSNPL-IFDNSYFTELLSGEKEGLLQLPSDKALLSD----PVFRPLVDKYAAD 226
Query: 292 SNLFFANFVNSMIKMGNV 309
+ FFA++ + K+ +
Sbjct: 227 EDAFFADYAEAHQKLSEL 244
>pdb|4GED|A Chain A, Crystal Structure Of The Leishmania Major
Peroxidase-Cytochrome C Complex
Length = 268
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 117/294 (39%), Gaps = 61/294 (20%)
Query: 34 SKTCPNVLQIVRREVQKAIKVEMRMAASLIRLHFH-----DCFVNGCDASVLLDGSDSEK 88
S+ P ++ +R +++ I ++ + SLIRL +H DCF DGS
Sbjct: 1 SEEPPFDIRALRADIEDMISEKLELGPSLIRLAWHEAASYDCFKK--------DGS---- 48
Query: 89 FAAPNRNSAR--------GFEVIDAIKTAVE--RQCSGVVSCADILAIAARDSVLLSGGP 138
PN S R G + +D + A+E ++ +S AD+ +AA ++ GGP
Sbjct: 49 ---PNSASMRFKPECLYAGNKGLDIPRKALETLKKKYPQISYADLWVLAAYVAIEYMGGP 105
Query: 139 TWKVLLGR---RDGLVANQTGANALPSPFEGLNILTAKFAAVGLNITDLVSLSGGAHTIG 195
T GR +DG V G LP + + + F +G N + V+L GAHT G
Sbjct: 106 TIPFCWGRVDAKDGSVCGPDG--RLPDGSKTQSHVREVFRRLGFNDQETVALI-GAHTCG 162
Query: 196 LAKCAFFSNRLSNFSGTGAPDAT-MDTSLVSEL--RSLCANGDGNNTAPLDRNSIDLFDN 252
F S + G D D S ++L N +DR + L
Sbjct: 163 ECHIEF-----SGYHGPWTHDKNGFDNSFFTQLLDEDWVLNPKVEQMQLMDRATTKLM-- 215
Query: 253 HYFQNLINNKGLLSSDQILYSSDEAKSTTKSLVESYSSNSNLFFANFVNSMIKM 306
+L SD L + + VE Y+ +++ F +F N+ K+
Sbjct: 216 -----------MLPSDVCLL----LDPSYRKYVELYAKDNDRFNKDFANAFKKL 254
>pdb|3RIW|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase
Mutant C197t
pdb|3RIW|B Chain B, The Crystal Structure Of Leishmania Major Peroxidase
Mutant C197t
Length = 271
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 117/294 (39%), Gaps = 61/294 (20%)
Query: 34 SKTCPNVLQIVRREVQKAIKVEMRMAASLIRLHFH-----DCFVNGCDASVLLDGSDSEK 88
S+ P ++ +R +++ I ++ + SLIRL +H DCF DGS
Sbjct: 2 SEEPPFDIRALRADIEDMISEKLELGPSLIRLAWHEAASYDCFKK--------DGS---- 49
Query: 89 FAAPNRNSAR--------GFEVIDAIKTAVE--RQCSGVVSCADILAIAARDSVLLSGGP 138
PN S R G + +D + A+E ++ +S AD+ +AA ++ GGP
Sbjct: 50 ---PNSASMRFKPECLYAGNKGLDIPRKALETLKKKYPQISYADLWVLAAYVAIEYMGGP 106
Query: 139 TWKVLLGR---RDGLVANQTGANALPSPFEGLNILTAKFAAVGLNITDLVSLSGGAHTIG 195
T GR +DG V G LP + + + F +G N + V+L GAHT G
Sbjct: 107 TIPFCWGRVDAKDGSVCGPDG--RLPDGSKTQSHVREVFRRLGFNDQETVALI-GAHTCG 163
Query: 196 LAKCAFFSNRLSNFSGTGAPDAT-MDTSLVSEL--RSLCANGDGNNTAPLDRNSIDLFDN 252
F S + G D D S ++L N +DR + L
Sbjct: 164 ETHIEF-----SGYHGPWTHDKNGFDNSFFTQLLDEDWVLNPKVEQMQLMDRATTKLM-- 216
Query: 253 HYFQNLINNKGLLSSDQILYSSDEAKSTTKSLVESYSSNSNLFFANFVNSMIKM 306
+L SD L + + VE Y+ +++ F +F N+ K+
Sbjct: 217 -----------MLPSDVCLL----LDPSYRKYVELYAKDNDRFNKDFANAFKKL 255
>pdb|3RIV|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase
pdb|3RIV|B Chain B, The Crystal Structure Of Leishmania Major Peroxidase
Length = 271
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 117/294 (39%), Gaps = 61/294 (20%)
Query: 34 SKTCPNVLQIVRREVQKAIKVEMRMAASLIRLHFH-----DCFVNGCDASVLLDGSDSEK 88
S+ P ++ +R +++ I ++ + SLIRL +H DCF DGS
Sbjct: 2 SEEPPFDIRALRADIEDMISEKLELGPSLIRLAWHEAASYDCFKK--------DGS---- 49
Query: 89 FAAPNRNSAR--------GFEVIDAIKTAVE--RQCSGVVSCADILAIAARDSVLLSGGP 138
PN S R G + +D + A+E ++ +S AD+ +AA ++ GGP
Sbjct: 50 ---PNSASMRFKPECLYAGNKGLDIPRKALETLKKKYPQISYADLWVLAAYVAIEYMGGP 106
Query: 139 TWKVLLGR---RDGLVANQTGANALPSPFEGLNILTAKFAAVGLNITDLVSLSGGAHTIG 195
T GR +DG V G LP + + + F +G N + V+L GAHT G
Sbjct: 107 TIPFCWGRVDAKDGSVCGPDG--RLPDGSKTQSHVREVFRRLGFNDQETVALI-GAHTCG 163
Query: 196 LAKCAFFSNRLSNFSGTGAPDAT-MDTSLVSEL--RSLCANGDGNNTAPLDRNSIDLFDN 252
F S + G D D S ++L N +DR + L
Sbjct: 164 ECHIEF-----SGYHGPWTHDKNGFDNSFFTQLLDEDWVLNPKVEQMQLMDRATTKLM-- 216
Query: 253 HYFQNLINNKGLLSSDQILYSSDEAKSTTKSLVESYSSNSNLFFANFVNSMIKM 306
+L SD L + + VE Y+ +++ F +F N+ K+
Sbjct: 217 -----------MLPSDVCLL----LDPSYRKYVELYAKDNDRFNKDFANAFKKL 255
>pdb|1IYN|A Chain A, Crystal Structure Of Chloroplastic Ascorbate Peroxidase
From Tobacco Plants And Structural Insights For Its
Instability
Length = 295
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 92/210 (43%), Gaps = 38/210 (18%)
Query: 110 VERQCSGVVSCADILAIAARDSVLLSGGPTWKVLLGRRDGLVANQTGAN------ALPSP 163
++ + SGV + AD+ +A+ ++ +GGP + GR D Q PSP
Sbjct: 80 IKDKYSGV-TYADLFQLASATAIEEAGGPKIPMKYGRVDVTEPEQCPEEGRLPDAGPPSP 138
Query: 164 FEGLNILTAKFAAVGLNITDLVSLSGGAHTIGLAKCAFFSNRLSNFSGTGAPDATMDTSL 223
+ L + F +GLN ++V+LS GAHT+G ++ + SG G P+
Sbjct: 139 AQHLRDV---FYRMGLNDKEIVALS-GAHTLGRSR--------PDRSGWGKPETKYTKD- 185
Query: 224 VSELRSLCANGDGNNTAPLDRNSIDLFDNHYFQNLINNKG----LLSSDQILYSSDEAKS 279
A G + TA + FDN YF+++ + +L +D L+
Sbjct: 186 -----GPGAPGGQSWTAQWLK-----FDNSYFKDIKERRDEDLLVLPTDAALFED----P 231
Query: 280 TTKSLVESYSSNSNLFFANFVNSMIKMGNV 309
+ K E Y+++ FF ++ + K+ N+
Sbjct: 232 SFKVYAEKYAADPEAFFKDYAEAHAKLSNL 261
>pdb|3FMU|A Chain A, Crystal Structure Analysis Of Fungal Versatile Peroxidase
From Pleurotus Eryngii
Length = 331
Score = 34.7 bits (78), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 92/221 (41%), Gaps = 32/221 (14%)
Query: 63 IRLHFHDCFV-------NGCDASVLLDGSDSEKFAAPNRNSARGFEVIDAIKTAVERQCS 115
+RL FHD G D S++ + F A +A E++ A K V +
Sbjct: 42 LRLTFHDAIGFSPTLGGGGADGSIIAFDTIETNFPA----NAGIDEIVSAQKPFVAKHN- 96
Query: 116 GVVSCADILAIAARDSVL-LSGGPTWKVLLGRRDGLVANQTGANALPSPFEGLNILTAKF 174
+S D + A V GG LGR D + A+ + +P PF+ ++ + A+
Sbjct: 97 --ISAGDFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAASPD--HLVPEPFDSVDSILARM 152
Query: 175 AAVGLNITDLVSLSGGAHTIGLAKCAFFSNRLSNFSGT-GAPDAT--MDTSLVSELRSLC 231
G + ++VSL +H+I A S + F T G D+ ++T L L
Sbjct: 153 GDAGFSPVEVVSLL-ASHSIAAADKVDPSIPGTPFDSTPGVFDSQFFIETQLKGRLFPGT 211
Query: 232 ANGDGNNTAPLDRNSIDLFDNHY----------FQNLINNK 262
A+ G +PL + I L +H +Q+++NN+
Sbjct: 212 ADNKGEAQSPL-QGEIRLQSDHLLARDPQTACEWQSMVNNQ 251
>pdb|1DDM|A Chain A, Solution Structure Of The Numb Ptb Domain Complexed To A
Nak Peptide
Length = 135
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 43/89 (48%), Gaps = 7/89 (7%)
Query: 35 KTCPNVLQIVRREVQKAIKVEMRMAASLIRLHFHDCFVNGCDASVLLDGS-DSEKFAAPN 93
+ C L+++R+ ++ ++ + ++ +R+ V+ +++D + + F AP+
Sbjct: 34 QVCEEALKVLRQSRRRPVRGLLHVSGDGLRV------VDDETKGLIVDQTIEKVSFCAPD 87
Query: 94 RNSARGFEVIDAIKTAVERQCSGVVSCAD 122
RN RGF I T C G ++C D
Sbjct: 88 RNHERGFSYICRDGTTRRWMCHGFLACKD 116
>pdb|1UB2|A Chain A, Crystal Structure Of Catalase-Peroxidase From
Synechococcus Pcc 7942
Length = 720
Score = 32.7 bits (73), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 150 LVANQTGANALPSPFEGLNILTAKFAAVGLNITDLVSLSGGAHTIGLAKC 199
+ N G + P P + + + FA + +N + V+L+ G HT+G KC
Sbjct: 220 IYVNPEGVDGNPDPLKTAHDVRVTFARMAMNDEETVALTAGGHTVG--KC 267
>pdb|2NMB|A Chain A, Dnumb Ptb Domain Complexed With A Phosphotyrosine Peptide,
Nmr, Ensemble Of Structures
Length = 160
Score = 32.3 bits (72), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 43/89 (48%), Gaps = 7/89 (7%)
Query: 35 KTCPNVLQIVRREVQKAIKVEMRMAASLIRLHFHDCFVNGCDASVLLDGS-DSEKFAAPN 93
+ C L+++R+ ++ ++ + ++ +R+ V+ +++D + + F AP+
Sbjct: 49 QVCEEALKVLRQSRRRPVRGLLHVSGDGLRV------VDDETKGLIVDQTIEKVSFCAPD 102
Query: 94 RNSARGFEVIDAIKTAVERQCSGVVSCAD 122
RN RGF I T C G ++C D
Sbjct: 103 RNHERGFSYICRDGTTRRWMCHGFLACKD 131
>pdb|3UT2|A Chain A, Crystal Structure Of Fungal Magkatg2
pdb|3UT2|B Chain B, Crystal Structure Of Fungal Magkatg2
Length = 764
Score = 32.0 bits (71), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 54/133 (40%), Gaps = 15/133 (11%)
Query: 141 KVLLGRRDGLV-ANQTGANALPSPFEGLNILTAKFAAVGLNITDLVSLSGGAHTIGLAKC 199
K L GL+ N G N P P + F +G+N T+ V+L G H G
Sbjct: 240 KPLAATHMGLIYVNPEGPNGTPDPAASAKDIREAFGRMGMNDTETVALIAGGHAFGKTHG 299
Query: 200 AFFSNRLSNFSGTGAPDATMDTSLVSELRSLCANGDGNN----TAPLD---RNSIDLFDN 252
A + + AP+A D + L + GDGN T+ L+ + + N
Sbjct: 300 AVKGSNIGP-----APEAA-DLGMQG-LGWHNSVGDGNGPNQMTSGLEVIWTKTPTKWSN 352
Query: 253 HYFQNLINNKGLL 265
Y ++LINN L
Sbjct: 353 GYLESLINNNWTL 365
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 28.1 bits (61), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 227 LRSLCANGDGNNTAPLDRNSIDLFDNHYFQNLINNKGLLSSD 268
++SL GN+ A L + I++ N Y +N++ KG+ + D
Sbjct: 55 VKSLKPESGGNHIADL-KKEIEILRNLYHENIVKYKGICTED 95
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 28.1 bits (61), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 227 LRSLCANGDGNNTAPLDRNSIDLFDNHYFQNLINNKGLLSSD 268
++SL GN+ A L + I++ N Y +N++ KG+ + D
Sbjct: 43 VKSLKPESGGNHIADL-KKEIEILRNLYHENIVKYKGICTED 83
>pdb|3N3R|A Chain A, Crystal Structure Of The E198a Variant Of
Catalase-Peroxidase Katg Of Burkholderia Pseudomallei
pdb|3N3R|B Chain B, Crystal Structure Of The E198a Variant Of
Catalase-Peroxidase Katg Of Burkholderia Pseudomallei
Length = 748
Score = 27.7 bits (60), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 10/85 (11%)
Query: 121 ADILAIAARDSVLLSGGPTWKV---------LLGRRDGLV-ANQTGANALPSPFEGLNIL 170
AD+ + + + LSGGP + L + GL+ N G + P P +
Sbjct: 198 ADVYWGSEKIWLELSGGPNSRYSGDRQLENPLAAVQMGLIYVNPEGPDGNPDPVAAARDI 257
Query: 171 TAKFAAVGLNITDLVSLSGGAHTIG 195
FA + +N + V+L G HT G
Sbjct: 258 RDTFARMAMNDEETVALIAGGHTFG 282
>pdb|3N3S|A Chain A, Crystal Structure Of The E198a Variant Of Burkholderia
Pseudomallei Catalase-Peroxidase Katg With Inh
pdb|3N3S|B Chain B, Crystal Structure Of The E198a Variant Of Burkholderia
Pseudomallei Catalase-Peroxidase Katg With Inh
Length = 748
Score = 27.7 bits (60), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 10/85 (11%)
Query: 121 ADILAIAARDSVLLSGGPTWKV---------LLGRRDGLV-ANQTGANALPSPFEGLNIL 170
AD+ + + + LSGGP + L + GL+ N G + P P +
Sbjct: 198 ADVYWGSEKIWLELSGGPNSRYSGDRQLENPLAAVQMGLIYVNPEGPDGNPDPVAAARDI 257
Query: 171 TAKFAAVGLNITDLVSLSGGAHTIG 195
FA + +N + V+L G HT G
Sbjct: 258 RDTFARMAMNDEETVALIAGGHTFG 282
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.133 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,104,977
Number of Sequences: 62578
Number of extensions: 349401
Number of successful extensions: 1085
Number of sequences better than 100.0: 55
Number of HSP's better than 100.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 954
Number of HSP's gapped (non-prelim): 56
length of query: 332
length of database: 14,973,337
effective HSP length: 99
effective length of query: 233
effective length of database: 8,778,115
effective search space: 2045300795
effective search space used: 2045300795
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)