Query 020053
Match_columns 332
No_of_seqs 225 out of 1561
Neff 5.0
Searched_HMMs 29240
Date Mon Mar 25 11:03:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020053.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020053hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1zdn_A Ubiquitin-conjugating e 100.0 2.5E-41 8.5E-46 295.6 14.6 153 1-185 3-158 (158)
2 4gpr_A Ubiquitin-conjugating e 100.0 1.9E-40 6.5E-45 287.8 16.4 147 9-187 2-151 (151)
3 2c2v_B Ubiquitin-conjugating e 100.0 8.8E-41 3E-45 291.0 13.7 148 8-187 2-152 (154)
4 2aak_A UBC1, ubiquitin conjuga 100.0 2.3E-40 8E-45 287.3 16.2 148 8-187 1-151 (152)
5 1ayz_A UBC2, ubiquitin-conjuga 100.0 1.2E-40 4.1E-45 294.9 14.5 149 8-188 1-152 (169)
6 1yh2_A HSPC150 protein similar 100.0 5.7E-40 2E-44 290.0 16.6 152 9-189 2-157 (169)
7 1z2u_A Ubiquitin-conjugating e 100.0 5.3E-40 1.8E-44 284.5 15.4 145 10-186 3-150 (150)
8 2c4o_A Ubiquitin-conjugating e 100.0 1.1E-39 3.9E-44 287.5 16.5 148 7-186 15-165 (165)
9 2ayv_A Ubiquitin-conjugating e 100.0 8E-40 2.8E-44 288.8 15.6 147 7-185 17-166 (166)
10 2r0j_A Ubiquitin carrier prote 100.0 6.2E-40 2.1E-44 284.0 13.8 143 13-187 3-148 (149)
11 2ucz_A UBC7, ubiquitin conjuga 100.0 9.9E-40 3.4E-44 286.8 15.2 150 8-186 1-164 (165)
12 2e2c_A Ubiquitin conjugating e 100.0 1.1E-39 3.8E-44 284.4 14.9 151 1-186 1-154 (156)
13 2bep_A Ubiquitin-conjugating e 100.0 1.8E-39 6E-44 283.9 16.0 148 7-186 4-158 (159)
14 2f4z_A Tgtwinscan_2721 - E2 do 100.0 1.3E-39 4.5E-44 294.2 14.4 154 1-186 22-192 (193)
15 2gjd_A Ubiquitin-conjugating e 100.0 2.3E-39 7.8E-44 282.9 15.3 149 8-186 1-157 (157)
16 3h8k_A Ubiquitin-conjugating e 100.0 3.5E-39 1.2E-43 282.8 16.0 147 10-185 2-162 (164)
17 1jat_A Ubiquitin-conjugating e 100.0 1.2E-39 4E-44 283.9 12.2 146 11-188 5-153 (155)
18 3rcz_B SUMO-conjugating enzyme 100.0 3.8E-39 1.3E-43 283.7 15.4 148 9-186 8-163 (163)
19 1fxt_A Ubiquitin-conjugating e 100.0 1E-39 3.5E-44 282.4 11.0 143 12-186 2-149 (149)
20 2grr_A Ubiquitin-conjugating e 100.0 5E-39 1.7E-43 281.7 14.9 150 7-186 3-160 (161)
21 3k9o_A Ubiquitin-conjugating e 100.0 6E-39 2.1E-43 290.3 14.9 148 8-187 2-156 (201)
22 3bzh_A Ubiquitin-conjugating e 100.0 1.4E-38 4.7E-43 287.6 16.3 145 10-186 47-194 (194)
23 2pwq_A Ubiquitin conjugating e 100.0 4.9E-39 1.7E-43 295.0 13.1 153 6-190 18-174 (216)
24 3e46_A Ubiquitin-conjugating e 100.0 3.9E-38 1.3E-42 295.2 17.3 152 4-187 50-208 (253)
25 1i7k_A Ubiquitin-conjugating e 100.0 1.2E-38 4.1E-43 284.8 13.0 149 7-188 26-177 (179)
26 3fn1_B NEDD8-conjugating enzym 100.0 4.7E-38 1.6E-42 276.6 16.3 151 6-186 9-167 (167)
27 1wzv_A Ubiquitin-conjugating e 100.0 2.7E-38 9.4E-43 275.1 12.5 146 11-188 4-153 (155)
28 1yrv_A Ubiquitin-conjugating l 100.0 2E-38 6.8E-43 280.8 11.2 149 5-183 17-168 (169)
29 1tte_A Ubiquitin-conjugating e 100.0 7.5E-38 2.6E-42 287.0 9.7 146 11-188 2-152 (215)
30 3rz3_A Ubiquitin-conjugating e 100.0 5.2E-37 1.8E-41 274.3 14.6 147 10-185 6-172 (183)
31 2awf_A Ubiquitin-conjugating e 100.0 4.1E-37 1.4E-41 272.8 12.6 144 8-180 14-172 (172)
32 2onu_A Ubiquitin-conjugating e 100.0 1E-37 3.4E-42 271.5 7.0 144 11-189 2-150 (152)
33 2y9m_A Ubiquitin-conjugating e 100.0 1.5E-36 5.1E-41 269.0 14.5 151 7-186 2-168 (172)
34 1c4z_D UBCH7, ubiquitin conjug 100.0 2.9E-37 9.8E-42 268.4 8.1 145 12-188 3-151 (154)
35 2z5d_A Ubiquitin-conjugating e 100.0 5.4E-37 1.8E-41 274.3 8.0 147 7-189 19-172 (179)
36 1y8x_A Ubiquitin-conjugating e 100.0 4.4E-36 1.5E-40 263.2 13.3 139 10-183 5-147 (160)
37 2nvu_C NEDD8-conjugating enzym 100.0 8.6E-36 2.9E-40 266.3 14.2 143 6-183 21-167 (180)
38 2fo3_A Ubiquitin-conjugating e 100.0 6.4E-36 2.2E-40 252.1 11.9 119 5-157 1-120 (125)
39 4ddg_A Ubiquitin-conjugating e 100.0 1.2E-35 4E-40 293.3 15.7 147 10-188 2-151 (399)
40 1yf9_A Ubiquitin carrier prote 100.0 2.8E-36 9.7E-41 267.4 9.4 143 11-189 12-159 (171)
41 2f4w_A Ubiquitin-conjugating e 100.0 4.8E-35 1.7E-39 262.9 13.9 146 7-184 10-155 (187)
42 2h2y_A Ubiquitin-conjugating e 100.0 7.3E-35 2.5E-39 249.3 14.1 120 4-157 14-134 (136)
43 3o2u_A NEDD8-conjugating enzym 100.0 7.9E-35 2.7E-39 262.1 13.1 144 7-185 25-178 (190)
44 4ds2_A Ubiquitin-conjugating e 100.0 7.5E-35 2.6E-39 256.6 7.8 141 6-178 3-163 (167)
45 3ceg_A Baculoviral IAP repeat- 100.0 1.6E-33 5.6E-38 271.7 16.0 159 5-187 70-244 (323)
46 2a7l_A Hypothetical ubiquitin- 100.0 4.7E-34 1.6E-38 244.9 10.8 115 5-152 17-135 (136)
47 2a4d_A Ubiquitin-conjugating e 100.0 2E-32 6.8E-37 240.8 11.9 126 6-161 20-152 (160)
48 2q0v_A Ubiquitin-conjugating e 100.0 1.8E-32 6.3E-37 239.8 11.1 129 7-168 17-155 (156)
49 1jat_B Ubiquitin-conjugating e 100.0 4.7E-32 1.6E-36 232.0 7.5 111 11-154 6-123 (138)
50 1zuo_A Hypothetical protein LO 100.0 1.3E-32 4.3E-37 247.1 3.7 120 4-154 20-155 (186)
51 2hlw_A Ubiquitin-conjugating e 100.0 6.5E-32 2.2E-36 239.4 7.0 123 9-161 33-162 (170)
52 2z6o_A UFM1-conjugating enzyme 99.9 2.8E-23 9.7E-28 183.5 1.3 98 12-146 33-144 (172)
53 3r3q_A Suppressor protein STP2 99.5 1.1E-14 3.6E-19 128.4 8.3 116 14-157 31-160 (162)
54 3kpa_A Probable ubiquitin fold 99.5 3.4E-15 1.1E-19 130.0 1.2 91 10-140 33-133 (168)
55 3obq_A Tumor susceptibility ge 99.1 3.2E-11 1.1E-15 104.6 4.9 106 16-156 25-140 (146)
56 2yz0_A Serine/threonine-protei 93.5 0.31 1.1E-05 40.2 8.5 69 12-81 11-85 (138)
57 2ebm_A RWD domain-containing p 93.2 0.25 8.6E-06 40.2 7.4 68 12-81 11-78 (128)
58 2day_A Ring finger protein 25; 92.5 0.51 1.7E-05 38.3 8.2 67 15-81 12-82 (128)
59 3zqs_A E3 ubiquitin-protein li 90.8 2.1 7.3E-05 38.1 10.9 82 15-152 5-86 (186)
60 2ebk_A RWD domain-containing p 87.4 1.4 4.6E-05 35.9 6.6 66 15-81 11-79 (128)
61 1ukx_A GCN2, GCN2 EIF2alpha ki 86.8 2.5 8.5E-05 34.5 7.9 69 12-81 11-86 (137)
62 2daw_A RWD domain containing p 77.9 5 0.00017 33.9 6.6 23 59-81 76-98 (154)
63 2dax_A Protein C21ORF6; RWD do 75.6 6.6 0.00023 32.8 6.7 23 59-81 74-96 (152)
64 1b9u_A Protein (ATP synthase); 38.4 26 0.0009 22.0 2.9 20 300-319 6-25 (34)
65 1rkl_A Dolichyl-diphosphooligo 24.3 71 0.0024 21.2 3.1 28 295-322 3-31 (36)
66 3u3c_B Paxillin LD2 peptide; 4 23.4 48 0.0017 20.0 2.0 20 12-31 6-25 (26)
67 2lat_A Dolichyl-diphosphooligo 23.4 74 0.0025 21.2 3.1 28 295-322 3-31 (37)
No 1
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.5e-41 Score=295.57 Aligned_cols=153 Identities=25% Similarity=0.510 Sum_probs=139.3
Q ss_pred CCcccCCCChHHHHHHHHHHHHHhhCCCCCeEEecCCCCceEEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCccccc
Q 020053 1 MAEDRYNLKNPAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLL 80 (332)
Q Consensus 1 ma~~~~~m~~~a~kRL~kEl~~l~~~p~~gi~v~p~ednl~~W~v~I~GP~dTpYeGGiF~l~I~fP~~YP~~PP~V~Fl 80 (332)
|+....+|+..+.+||++||++|++++++||++.+.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.
T Consensus 3 ~~~~~~~~s~~~~~RL~kEl~~l~~~~~~gi~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~ 82 (158)
T 1zdn_A 3 MNSNVENLPPHIIRLVYKEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFL 82 (158)
T ss_dssp -----CCSCHHHHHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEES
T ss_pred ccccccccCHHHHHHHHHHHHHHHhCCCCCEEEEECCCChhheeEEEECCCCCCccCcEEEEEEEcCCCCCCCCCEEEec
Confidence 67778899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccccccccccCCceeecccccCCCCCCccccCCCeEEeecCCCCCCCCCCCCCHHHHHHHHHHhCCC-CCCCh
Q 020053 81 TVRCCSLMEHKSYCLCADYGVRTNVCAFFPPQPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGA 159 (332)
Q Consensus 81 T~~~~~~i~Hp~~~~~~~~~~~~n~~~~~h~~PNv~v~~~G~ICL~iL~~~~e~WsP~~ti~sVL~sI~~lL~~-nP~~~ 159 (332)
| +||| || |+.+|+|||++|+ ++|+|+++|++||++|++||.+ ||+++
T Consensus 83 t-----~i~H----------------------Pn--v~~~G~iCl~iL~---~~W~p~~~i~~vL~~i~~ll~~pn~~~p 130 (158)
T 1zdn_A 83 T-----KIFH----------------------PN--VGANGEICVNVLK---RDWTAELGIRHVLLTIKCLLIHPNPESA 130 (158)
T ss_dssp S-----CCCC----------------------TT--BCTTSBBCHHHHT---TTCCTTCCHHHHHHHHHHHHHSCCGGGC
T ss_pred c-----Cccc----------------------CC--CCCCCEEehhhcC---CCCCCCCcHHHHHHHHHHHHhCCCCCCc
Confidence 9 8888 99 6788999999997 8999999999999999999954 66666
Q ss_pred hh--hhHhhHHhHHHHHHHHHHHHhhhC
Q 020053 160 LG--SLDYKKEERRALAIKSREAAPKFG 185 (332)
Q Consensus 160 ~~--a~~~~~~dr~~y~~kare~~~kya 185 (332)
++ ++.++++|++.|.++||+|+++||
T Consensus 131 ~n~~aa~~~~~d~~~f~~~a~~~t~~~A 158 (158)
T 1zdn_A 131 LNEEAGRLLLENYEEYAARARLLTEIHG 158 (158)
T ss_dssp SSHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred ccHHHHHHHHHCHHHHHHHHHHHHHHhC
Confidence 55 677888999999999999999986
No 2
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=100.00 E-value=1.9e-40 Score=287.79 Aligned_cols=147 Identities=27% Similarity=0.662 Sum_probs=137.5
Q ss_pred ChHHHHHHHHHHHHHhhCCCCCeEEecCCCCceEEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCccccccccccccc
Q 020053 9 KNPAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTVRCCSLM 88 (332)
Q Consensus 9 ~~~a~kRL~kEl~~l~~~p~~gi~v~p~ednl~~W~v~I~GP~dTpYeGGiF~l~I~fP~~YP~~PP~V~FlT~~~~~~i 88 (332)
+..|.+||++|+++|+++++.|+++.|.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.| +|
T Consensus 2 a~~a~~RL~kEl~~l~~~~~~~i~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t-----~i 76 (151)
T 4gpr_A 2 AAMAMRRIQKELREIQQDPPCNCSAGPVGDDIFHWTATITGPDDSPYQGGLFFLDVHFPVDYPFKAPRVTFMT-----KV 76 (151)
T ss_dssp CHHHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCSSSTTTTCEEEEEEECCTTTTSSCCEEEESS-----CC
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEEcCCCceEEEEEEeCCCCCCcCCCEEEEEEECCCCCCCCcceeEEec-----Cc
Confidence 4578999999999999999999999999999999999999999999999999999999999999999999999 88
Q ss_pred cccccccccCCceeecccccCCCCCCccccCCCeEEeecCCCCCCCCCCCCCHHHHHHHHHHhCCC-CCCChhh--hhHh
Q 020053 89 EHKSYCLCADYGVRTNVCAFFPPQPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDY 165 (332)
Q Consensus 89 ~Hp~~~~~~~~~~~~n~~~~~h~~PNv~v~~~G~ICL~iL~~~~e~WsP~~ti~sVL~sI~~lL~~-nP~~~~~--a~~~ 165 (332)
|| || |+.+|+|||++|. ++|+|+++|++||++|++||.+ ||+++++ ++.+
T Consensus 77 ~H----------------------Pn--v~~~G~iCl~iL~---~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~ 129 (151)
T 4gpr_A 77 YH----------------------PN--INKNGVICLDILK---DQWSPALTLSRVLLSISSLLTDPNPSDPLDPEVANV 129 (151)
T ss_dssp CB----------------------TT--BCTTCBBCCGGGT---TTCCTTCCHHHHHHHHHHHHHCCCTTSCSSHHHHHH
T ss_pred cc----------------------ce--ECCCCEEEccccc---CCCCCCCcHHHHHHHHHHHhcCCCCCCchhHHHHHH
Confidence 88 99 6789999999998 8999999999999999999965 6777765 5778
Q ss_pred hHHhHHHHHHHHHHHHhhhCCh
Q 020053 166 KKEERRALAIKSREAAPKFGTP 187 (332)
Q Consensus 166 ~~~dr~~y~~kare~~~kya~~ 187 (332)
+++|+++|.++||+|+++||++
T Consensus 130 ~~~d~~~f~~~ar~~~~~ya~p 151 (151)
T 4gpr_A 130 LRANKKQFEDTAREWTRMYARP 151 (151)
T ss_dssp HHHCHHHHHHHHHHHHHHHCCC
T ss_pred HHHCHHHHHHHHHHHHHHhcCC
Confidence 8899999999999999999974
No 3
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=8.8e-41 Score=290.98 Aligned_cols=148 Identities=27% Similarity=0.522 Sum_probs=136.5
Q ss_pred CChHHHHHHHHHHHHHhhCCCCCeEEecCCCCceEEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccccccccccc
Q 020053 8 LKNPAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTVRCCSL 87 (332)
Q Consensus 8 m~~~a~kRL~kEl~~l~~~p~~gi~v~p~ednl~~W~v~I~GP~dTpYeGGiF~l~I~fP~~YP~~PP~V~FlT~~~~~~ 87 (332)
|+..+.+||++|+++|+++++.|+++.|.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.| +
T Consensus 2 ~s~~~~~RL~kEl~~l~~~~~~~i~~~~~~~~l~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t-----~ 76 (154)
T 2c2v_B 2 GSAGLPRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMT-----K 76 (154)
T ss_dssp CSCSCCHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECS-----C
T ss_pred ccHHHHHHHHHHHHHHHhCCCCCEEEEECCCchheEEEEEECCCCCCcCCCeEEEEEEcCCCCCCCCCEEEeec-----C
Confidence 45567899999999999999999999999999999999999999999999999999999999999999999999 8
Q ss_pred ccccccccccCCceeecccccCCCCCCccccCCCeEEeecCCCCCCCCCCCCCHHHHHHHHHHhCCC-CCCChhh--hhH
Q 020053 88 MEHKSYCLCADYGVRTNVCAFFPPQPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLD 164 (332)
Q Consensus 88 i~Hp~~~~~~~~~~~~n~~~~~h~~PNv~v~~~G~ICL~iL~~~~e~WsP~~ti~sVL~sI~~lL~~-nP~~~~~--a~~ 164 (332)
||| || ++.+|+|||++|+ ++|+|+++|++||++|++||.+ ||+++++ ++.
T Consensus 77 i~H----------------------Pn--v~~~G~iCl~iL~---~~W~p~~~i~~vl~~i~~ll~~pn~~~p~n~~aa~ 129 (154)
T 2c2v_B 77 IYH----------------------PN--VDKLGRICLDILK---DKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAE 129 (154)
T ss_dssp CCC----------------------TT--BCTTCBBCCHHHH---TSCCTTCCHHHHHHHHHHHTTSCCCCCC--CHHHH
T ss_pred ccc----------------------Cc--CccCCeEEchhcc---CCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHH
Confidence 888 99 5788999999997 8999999999999999999965 7777765 678
Q ss_pred hhHHhHHHHHHHHHHHHhhhCCh
Q 020053 165 YKKEERRALAIKSREAAPKFGTP 187 (332)
Q Consensus 165 ~~~~dr~~y~~kare~~~kya~~ 187 (332)
++++|+++|.++||+|+++||..
T Consensus 130 ~~~~d~~~f~~~ar~~~~~~a~~ 152 (154)
T 2c2v_B 130 QWKTNEAQAIETARAWTRLYAMN 152 (154)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSSC
T ss_pred HHHHCHHHHHHHHHHHHHHhcCC
Confidence 88899999999999999999975
No 4
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=100.00 E-value=2.3e-40 Score=287.27 Aligned_cols=148 Identities=29% Similarity=0.602 Sum_probs=137.4
Q ss_pred CChHHHHHHHHHHHHHhhCCCCCeEEecCCCCceEEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccccccccccc
Q 020053 8 LKNPAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTVRCCSL 87 (332)
Q Consensus 8 m~~~a~kRL~kEl~~l~~~p~~gi~v~p~ednl~~W~v~I~GP~dTpYeGGiF~l~I~fP~~YP~~PP~V~FlT~~~~~~ 87 (332)
|++.+.+||++|+++|+++++.|+.+.|.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.| +
T Consensus 1 Ms~~a~~RL~~E~~~l~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t-----~ 75 (152)
T 2aak_A 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVS-----R 75 (152)
T ss_dssp CCCHHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESS-----C
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEEeCCCCccEEEEEEeCCCCCCccCCEEEEEEECCCCCCCCCCEEEEec-----C
Confidence 67789999999999999999999999999999999999999999999999999999999999999999999999 8
Q ss_pred ccccccccccCCceeecccccCCCCCCccccCCCeEEeecCCCCCCCCCCCCCHHHHHHHHHHhCCC-CCCChhh--hhH
Q 020053 88 MEHKSYCLCADYGVRTNVCAFFPPQPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLD 164 (332)
Q Consensus 88 i~Hp~~~~~~~~~~~~n~~~~~h~~PNv~v~~~G~ICL~iL~~~~e~WsP~~ti~sVL~sI~~lL~~-nP~~~~~--a~~ 164 (332)
||| || |+.+|.|||++|. ++|+|+++|++||.+|++||.+ ||+++++ ++.
T Consensus 76 i~H----------------------Pn--v~~~G~iCl~iL~---~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~ 128 (152)
T 2aak_A 76 MFH----------------------PN--IYADGSICLDILQ---NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAAR 128 (152)
T ss_dssp CCC----------------------TT--BCTTSBBCCGGGT---TSCCTTCCHHHHHHHHHHHHTSCCTTSCSSHHHHH
T ss_pred ccc----------------------CC--CCCCCEEechhhc---CCCCCCCcHHHHHHHHHHHHhCCCCCccccHHHHH
Confidence 888 99 6779999999997 8999999999999999999965 6666655 577
Q ss_pred hhHHhHHHHHHHHHHHHhhhCCh
Q 020053 165 YKKEERRALAIKSREAAPKFGTP 187 (332)
Q Consensus 165 ~~~~dr~~y~~kare~~~kya~~ 187 (332)
++++|+++|.++||+|+++|+..
T Consensus 129 ~~~~~~~~y~~~~~~~~~~~a~~ 151 (152)
T 2aak_A 129 MYSESKREYNRRVRDVVEQSWTA 151 (152)
T ss_dssp HHHHCHHHHHHHHHHHHHHHCC-
T ss_pred HHHHCHHHHHHHHHHHHHHHccc
Confidence 78899999999999999999865
No 5
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=1.2e-40 Score=294.88 Aligned_cols=149 Identities=27% Similarity=0.567 Sum_probs=137.6
Q ss_pred CChHHHHHHHHHHHHHhhCCCCCeEEecCCCCceEEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccccccccccc
Q 020053 8 LKNPAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTVRCCSL 87 (332)
Q Consensus 8 m~~~a~kRL~kEl~~l~~~p~~gi~v~p~ednl~~W~v~I~GP~dTpYeGGiF~l~I~fP~~YP~~PP~V~FlT~~~~~~ 87 (332)
|++.+.+||++||++|+++++.||.+.|.++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|+| +
T Consensus 1 Ms~~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~v~F~t-----~ 75 (169)
T 1ayz_A 1 MSTPARRRLMRDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLS-----E 75 (169)
T ss_dssp -CCHHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESS-----C
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEEecCCccccceEEEECCCCCCcCCCEEEEEEECcccCCCCCCcccccc-----C
Confidence 66789999999999999999999999999999999999999999999999999999999999999999999999 8
Q ss_pred ccccccccccCCceeecccccCCCCCCccccCCCeEEeecCCCCCCCCCCCCCHHHHHHHHHHhCCC-CCCChhh--hhH
Q 020053 88 MEHKSYCLCADYGVRTNVCAFFPPQPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLD 164 (332)
Q Consensus 88 i~Hp~~~~~~~~~~~~n~~~~~h~~PNv~v~~~G~ICL~iL~~~~e~WsP~~ti~sVL~sI~~lL~~-nP~~~~~--a~~ 164 (332)
||| || |+.+|.|||++|+ +.|+|+++|++||++|++||.+ ||+++++ ++.
T Consensus 76 i~H----------------------PN--I~~~G~ICl~iL~---~~WsP~~~i~~vL~si~~ll~~Pn~~~P~n~~aa~ 128 (169)
T 1ayz_A 76 MFH----------------------PN--VYANGEICLDILQ---NRWTPTYDVASILTSIQSLFNDPNPASPANVEAAT 128 (169)
T ss_dssp CCC----------------------TT--BCTTSBBCCGGGT---TTCCTTCCHHHHHHHHHHHHTCCCCSSCSSHHHHH
T ss_pred Ccc----------------------CC--CCCCCeEeehhhc---cCCCCcCcHHHHHHHHHHHHhCCCCCcHHHHHHHH
Confidence 888 99 6789999999998 8999999999999999999965 6666665 577
Q ss_pred hhHHhHHHHHHHHHHHHhhhCChh
Q 020053 165 YKKEERRALAIKSREAAPKFGTPE 188 (332)
Q Consensus 165 ~~~~dr~~y~~kare~~~kya~~~ 188 (332)
+++++++.|.++||+|+++|+...
T Consensus 129 ~~~~d~~~y~~~~r~~~~~~a~~~ 152 (169)
T 1ayz_A 129 LFKDHKSQYVKRVKETVEKSWEDD 152 (169)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHCHHHHHHHHHHHHHHHcCCC
Confidence 788999999999999999998544
No 6
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=5.7e-40 Score=289.99 Aligned_cols=152 Identities=24% Similarity=0.478 Sum_probs=139.3
Q ss_pred ChHHHHHHHHHHHHHhhCCCCCeEEecCCCCceEEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCccccccccccccc
Q 020053 9 KNPAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTVRCCSLM 88 (332)
Q Consensus 9 ~~~a~kRL~kEl~~l~~~p~~gi~v~p~ednl~~W~v~I~GP~dTpYeGGiF~l~I~fP~~YP~~PP~V~FlT~~~~~~i 88 (332)
++.+.+||++||++|+++++.||++.+.++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|.| +|
T Consensus 2 s~~~~~RL~kEl~~l~~~~~~gi~~~~~~~~l~~w~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t-----~i 76 (169)
T 1yh2_A 2 SMQRASRLKRELHMLATEPPPGITCWQDKDQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLT-----PI 76 (169)
T ss_dssp CHHHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESS-----CC
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEEeCCCCCCCCcEEEeec-----CC
Confidence 4578999999999999999999999999999999999999999999999999999999999999999999999 88
Q ss_pred cccccccccCCceeecccccCCCCCCccccCCCeEEeecCCCCC-CCCCCCCCHHHHHHHHHHhCCC-CCCChhh--hhH
Q 020053 89 EHKSYCLCADYGVRTNVCAFFPPQPNGRFETQTKICLSISNHHP-EHWQPSWSVRTALVALIAFMPT-NPNGALG--SLD 164 (332)
Q Consensus 89 ~Hp~~~~~~~~~~~~n~~~~~h~~PNv~v~~~G~ICL~iL~~~~-e~WsP~~ti~sVL~sI~~lL~~-nP~~~~~--a~~ 164 (332)
|| || |+.+|+|||++|+.++ ++|+|+++|++||++|++||.+ ||+++++ ++.
T Consensus 77 ~H----------------------PN--v~~~G~iCl~iL~~~~~~~W~p~~~i~~vL~si~~ll~~p~~~~p~n~~aa~ 132 (169)
T 1yh2_A 77 YH----------------------PN--IDSAGRICLDVLKLPPKGAWRPSLNIATVLTSIQLLMSEPNPDDPLMADISS 132 (169)
T ss_dssp CB----------------------TT--BCTTCBBCCGGGSCTTTSCCCTTSCHHHHHHHHHHHHHSCCTTSCSCHHHHH
T ss_pred cc----------------------cc--CCcCCeEecccccCCcccCCCCCCcHHHHHHHHHHHHhCCCCcchHhHHHHH
Confidence 88 99 6789999999998654 7899999999999999999964 6676655 567
Q ss_pred hhHHhHHHHHHHHHHHHhhhCChhH
Q 020053 165 YKKEERRALAIKSREAAPKFGTPER 189 (332)
Q Consensus 165 ~~~~dr~~y~~kare~~~kya~~~~ 189 (332)
++++|+++|.++||+|+++||....
T Consensus 133 ~~~~~~~~y~~~~r~~~~~~a~~~~ 157 (169)
T 1yh2_A 133 EFKYNKPAFLKNARQWTEKHARQKQ 157 (169)
T ss_dssp HHHHCHHHHHHHHHHHHHHHSCCC-
T ss_pred HHHhhHHHHHHHHHHHHHHHccccc
Confidence 7889999999999999999998653
No 7
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=100.00 E-value=5.3e-40 Score=284.46 Aligned_cols=145 Identities=29% Similarity=0.651 Sum_probs=135.2
Q ss_pred hHHHHHHHHHHHHHhhCCCCCeEEecCCCCceEEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccccccccccccc
Q 020053 10 NPAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTVRCCSLME 89 (332)
Q Consensus 10 ~~a~kRL~kEl~~l~~~p~~gi~v~p~ednl~~W~v~I~GP~dTpYeGGiF~l~I~fP~~YP~~PP~V~FlT~~~~~~i~ 89 (332)
..+.+||++|+++|+++++.|+.+.|.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.| +||
T Consensus 3 ~~~~~RL~kEl~~l~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t-----~i~ 77 (150)
T 1z2u_A 3 HMALKRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTT-----RIY 77 (150)
T ss_dssp CHHHHHHHHHHHHHHHSCCSSEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESS-----CCC
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEECCCcceEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCcEEEEec-----Ccc
Confidence 458899999999999999999999999999999999999999999999999999999999999999999999 888
Q ss_pred ccccccccCCceeecccccCCCCCCccccCCCeEEeecCCCCCCCCCCCCCHHHHHHHHHHhCCC-CCCChhh--hhHhh
Q 020053 90 HKSYCLCADYGVRTNVCAFFPPQPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYK 166 (332)
Q Consensus 90 Hp~~~~~~~~~~~~n~~~~~h~~PNv~v~~~G~ICL~iL~~~~e~WsP~~ti~sVL~sI~~lL~~-nP~~~~~--a~~~~ 166 (332)
| || |+.+|+|||++|+ ++|+|+++|++||++|++||.+ ||+++++ ++.++
T Consensus 78 H----------------------Pn--v~~~G~iCl~iL~---~~W~p~~~i~~vl~~i~~ll~~pn~~~p~n~~aa~~~ 130 (150)
T 1z2u_A 78 H----------------------PN--INSNGSICLDILR---SQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIY 130 (150)
T ss_dssp B----------------------TT--BCTTCBBCCGGGT---TTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHH
T ss_pred c----------------------Cc--CCCCCeEeecccc---CCCCCCCCHHHHHHHHHHHhhCCCCCCccCHHHHHHH
Confidence 8 99 6789999999998 8999999999999999999964 6776655 56778
Q ss_pred HHhHHHHHHHHHHHHhhhCC
Q 020053 167 KEERRALAIKSREAAPKFGT 186 (332)
Q Consensus 167 ~~dr~~y~~kare~~~kya~ 186 (332)
++|+++|.+++|+|+++||+
T Consensus 131 ~~~~~~f~~~~~~~~~~~a~ 150 (150)
T 1z2u_A 131 KTDRERYNQLAREWTQKYAM 150 (150)
T ss_dssp HHCHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHhC
Confidence 89999999999999999984
No 8
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=100.00 E-value=1.1e-39 Score=287.47 Aligned_cols=148 Identities=29% Similarity=0.635 Sum_probs=136.9
Q ss_pred CCChHHHHHHHHHHHHHhhCCCCCeEEecCCCCceEEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCccccccccccc
Q 020053 7 NLKNPAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTVRCCS 86 (332)
Q Consensus 7 ~m~~~a~kRL~kEl~~l~~~p~~gi~v~p~ednl~~W~v~I~GP~dTpYeGGiF~l~I~fP~~YP~~PP~V~FlT~~~~~ 86 (332)
...+.+.+||++|+++|+++++.||++.|.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|
T Consensus 15 ~~~~~~~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegg~f~l~i~fp~~YP~~PP~v~F~T----- 89 (165)
T 2c4o_A 15 PRGSMALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTT----- 89 (165)
T ss_dssp -CCHHHHHHHHHHHHHHHSSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECS-----
T ss_pred cCCcHHHHHHHHHHHHHHhCCCCCEEEEEcCCCcceeEEEEECCCCCCccCceEEEEEECCCcCCCCCCEEEEec-----
Confidence 345679999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccccCCceeecccccCCCCCCccccCCCeEEeecCCCCCCCCCCCCCHHHHHHHHHHhCCC-CCCChhh--hh
Q 020053 87 LMEHKSYCLCADYGVRTNVCAFFPPQPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SL 163 (332)
Q Consensus 87 ~i~Hp~~~~~~~~~~~~n~~~~~h~~PNv~v~~~G~ICL~iL~~~~e~WsP~~ti~sVL~sI~~lL~~-nP~~~~~--a~ 163 (332)
+||| || |+.+|+|||++|+ ++|+|+++|++||++|++||.+ ||+++++ ++
T Consensus 90 ~i~H----------------------Pn--V~~~G~ICl~iL~---~~W~P~~ti~~vL~si~~ll~~pn~~~P~n~~aa 142 (165)
T 2c4o_A 90 RIYH----------------------PN--INSNGSICLDILR---SQWSPALTISKVLLSICSLLCDPNPDDPLVPEIA 142 (165)
T ss_dssp CCCB----------------------TT--BCTTCBBCCGGGT---TTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHH
T ss_pred CCcC----------------------Cc--CCCCCeEeehhhc---CCCCCcCcHHHHHHHHHHHHhCCCCCccccHHHH
Confidence 8888 99 6789999999998 8999999999999999999964 6777655 56
Q ss_pred HhhHHhHHHHHHHHHHHHhhhCC
Q 020053 164 DYKKEERRALAIKSREAAPKFGT 186 (332)
Q Consensus 164 ~~~~~dr~~y~~kare~~~kya~ 186 (332)
.++++|+++|.++||+|+++||+
T Consensus 143 ~~~~~d~~~y~~~ar~~~~~~a~ 165 (165)
T 2c4o_A 143 RIYKTDREKYNRIAREWTQKYAM 165 (165)
T ss_dssp HHHHHCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC
Confidence 77889999999999999999984
No 9
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=8e-40 Score=288.82 Aligned_cols=147 Identities=30% Similarity=0.654 Sum_probs=135.6
Q ss_pred CCChHHHHHHHHHHHHHhhCCCCCeEEecCCCCceEEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCccccccccccc
Q 020053 7 NLKNPAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTVRCCS 86 (332)
Q Consensus 7 ~m~~~a~kRL~kEl~~l~~~p~~gi~v~p~ednl~~W~v~I~GP~dTpYeGGiF~l~I~fP~~YP~~PP~V~FlT~~~~~ 86 (332)
...+.+.+||++|+++|+++++.||.+.|.++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|+|
T Consensus 17 ~~~~~~~~RL~kEl~~l~~~~~~gi~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T----- 91 (166)
T 2ayv_A 17 LYFQGALKRINKELNDLSKDPPTNCSAGPVGDDMFHWQATIMGPEDSPYSGGVFFLNIHFPSDYPFKPPKVNFTT----- 91 (166)
T ss_dssp --CTTHHHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECS-----
T ss_pred ccCcHHHHHHHHHHHHHHhCCCCCEEEEEcCCCcceeeEEEECCCCCCcCCCEEEEEEeCCCcCCCCCceeeecc-----
Confidence 345568999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccccCCceeecccccCCCCCCccccCCCeEEeecCCCCCCCCCCCCCHHHHHHHHHHhCCC-CCCChhh--hh
Q 020053 87 LMEHKSYCLCADYGVRTNVCAFFPPQPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SL 163 (332)
Q Consensus 87 ~i~Hp~~~~~~~~~~~~n~~~~~h~~PNv~v~~~G~ICL~iL~~~~e~WsP~~ti~sVL~sI~~lL~~-nP~~~~~--a~ 163 (332)
+||| || |+.+|.|||++|+ ++|+|+++|++||++|++||.+ ||+++++ ++
T Consensus 92 ~i~H----------------------PN--I~~~G~ICL~iL~---~~WsP~~ti~~vL~sI~sll~~pn~~~Pln~~aa 144 (166)
T 2ayv_A 92 KIYH----------------------PN--INSQGAICLDILK---DQWSPALTISKVLLSISSLLTDPNPDDPLVPEIA 144 (166)
T ss_dssp CCCB----------------------TT--BCTTCBBCCGGGT---TTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHH
T ss_pred CCcC----------------------Cc--CCCCCeEEccccc---ccCCCCCcHHHHHHHHHHHHhCCCCCchhhHHHH
Confidence 8888 99 6789999999998 8999999999999999999964 6666655 57
Q ss_pred HhhHHhHHHHHHHHHHHHhhhC
Q 020053 164 DYKKEERRALAIKSREAAPKFG 185 (332)
Q Consensus 164 ~~~~~dr~~y~~kare~~~kya 185 (332)
.++++|++.|.++||+|+++||
T Consensus 145 ~l~~~d~~~f~~~ar~~~~~~A 166 (166)
T 2ayv_A 145 HLYKSDRMRYDQTAREWSQKYA 166 (166)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHC
T ss_pred HHHHHCHHHHHHHHHHHHHHhC
Confidence 7888999999999999999986
No 10
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=100.00 E-value=6.2e-40 Score=283.99 Aligned_cols=143 Identities=29% Similarity=0.628 Sum_probs=133.6
Q ss_pred HHHHHHHHHHHhhCCCCCeEEecCCCCceEEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCccccccccccccccccc
Q 020053 13 VKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTVRCCSLMEHKS 92 (332)
Q Consensus 13 ~kRL~kEl~~l~~~p~~gi~v~p~ednl~~W~v~I~GP~dTpYeGGiF~l~I~fP~~YP~~PP~V~FlT~~~~~~i~Hp~ 92 (332)
.+||++|+++|+++++.|+++.+.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.| +|||
T Consensus 3 ~~RL~kEl~~l~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t-----~i~H-- 75 (149)
T 2r0j_A 3 PRRITKETQNLANEPPPGIMAVPVPENYRHFNILINGPDGTPYEGGTYKLELFLPEQYPMEPPKVRFLT-----KIYH-- 75 (149)
T ss_dssp CHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECS-----CCCB--
T ss_pred HHHHHHHHHHHHhCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEeCCcccCCCCCeeEecc-----CCcc--
Confidence 589999999999999999999999999999999999999999999999999999999999999999999 8888
Q ss_pred cccccCCceeecccccCCCCCCccccCCCeEEeecCCCCCCCCCCCCCHHHHHHHHHHhCCC-CCCChhh--hhHhhHHh
Q 020053 93 YCLCADYGVRTNVCAFFPPQPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKKEE 169 (332)
Q Consensus 93 ~~~~~~~~~~~n~~~~~h~~PNv~v~~~G~ICL~iL~~~~e~WsP~~ti~sVL~sI~~lL~~-nP~~~~~--a~~~~~~d 169 (332)
|| |+.+|+|||++|+ +.|+|+++|++||++|++||.+ ||+++++ ++.++++|
T Consensus 76 --------------------Pn--v~~~G~iCl~iL~---~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~ 130 (149)
T 2r0j_A 76 --------------------PN--IDKLGRICLDILK---DKWSPALQIRTVLLSIQALLSSPEPDDPLDSKVAEHFKQD 130 (149)
T ss_dssp --------------------TT--BCTTCBBCCGGGT---TTCCTTSCHHHHHHHHHHHHHSCCTTSCSSCHHHHHHHHC
T ss_pred --------------------CC--CCCCCEEechhcC---CCCCCCCcHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHC
Confidence 99 6788999999998 8999999999999999999964 6666655 57778899
Q ss_pred HHHHHHHHHHHHhhhCCh
Q 020053 170 RRALAIKSREAAPKFGTP 187 (332)
Q Consensus 170 r~~y~~kare~~~kya~~ 187 (332)
++.|.++||+|+++||..
T Consensus 131 ~~~f~~~~~~~~~~~a~~ 148 (149)
T 2r0j_A 131 KNDAEHVARQWNKIYANN 148 (149)
T ss_dssp HHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHHccC
Confidence 999999999999999964
No 11
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=9.9e-40 Score=286.80 Aligned_cols=150 Identities=24% Similarity=0.539 Sum_probs=134.7
Q ss_pred CChHHHHHHHHHHHHHhhCCCCCeEEecCC-CCceEEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCccccccccccc
Q 020053 8 LKNPAVKRILQEVKEMQSNPSDDFMSLPLE-ENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTVRCCS 86 (332)
Q Consensus 8 m~~~a~kRL~kEl~~l~~~p~~gi~v~p~e-dnl~~W~v~I~GP~dTpYeGGiF~l~I~fP~~YP~~PP~V~FlT~~~~~ 86 (332)
|++.+.+||++|+++|+++++.||++.|.+ +|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|
T Consensus 1 M~~~a~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t----- 75 (165)
T 2ucz_A 1 MSKTAQKRLLKELQQLIKDSPPGIVAGPKSENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTP----- 75 (165)
T ss_dssp -CHHHHHHHHHHHHHHHHSCCTTEEEEESSSSCCSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESS-----
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEECCCCCCccCcEEEEEEECCccCCCCCCEEEEeC-----
Confidence 678899999999999999999999999875 79999999999999999999999999999999999999999999
Q ss_pred cccccccccccCCceeecccccCCCCCCccccCCCeEEeecCCC----------CCCCCCCCCCHHHHHHHHHHhCCC-C
Q 020053 87 LMEHKSYCLCADYGVRTNVCAFFPPQPNGRFETQTKICLSISNH----------HPEHWQPSWSVRTALVALIAFMPT-N 155 (332)
Q Consensus 87 ~i~Hp~~~~~~~~~~~~n~~~~~h~~PNv~v~~~G~ICL~iL~~----------~~e~WsP~~ti~sVL~sI~~lL~~-n 155 (332)
+||| || |+.+|+|||++|.. +.++|+|+++|++||++|++||.+ |
T Consensus 76 ~i~H----------------------PN--v~~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~Pn 131 (165)
T 2ucz_A 76 SILH----------------------PN--IYPNGEVCISILHSPGDDPNMYELAEERWSPVQSVEKILLSVMSMLSEPN 131 (165)
T ss_dssp CCSC----------------------TT--BCTTSBBCCGGGSCCCSCTTSTTTTTTSCCTTCCHHHHHHHHHHHHHSCC
T ss_pred CCcc----------------------CC--CCCCCcEeehhhCCccccccccCCCCCCCCCcCcHHHHHHHHHHHHhCCC
Confidence 8888 99 67899999999942 148999999999999999999954 5
Q ss_pred CCChhh--hhHhhHHhHHHHHHHHHHHHhhhCC
Q 020053 156 PNGALG--SLDYKKEERRALAIKSREAAPKFGT 186 (332)
Q Consensus 156 P~~~~~--a~~~~~~dr~~y~~kare~~~kya~ 186 (332)
|+++++ ++.++++|+++|.++||+|++++..
T Consensus 132 ~~~p~n~~aa~~~~~~~~~y~~~v~~~~~~~~~ 164 (165)
T 2ucz_A 132 IESGANIDACILWRDNRPEFERQVKLSILKSLG 164 (165)
T ss_dssp GGGCCCHHHHHHHHTTHHHHHHHHHHHHHHHTT
T ss_pred CCCchhHHHHHHHHHCHHHHHHHHHHHHHHHhh
Confidence 555544 5777889999999999999999863
No 12
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=100.00 E-value=1.1e-39 Score=284.37 Aligned_cols=151 Identities=27% Similarity=0.517 Sum_probs=136.9
Q ss_pred CCcccCCCChHHHHHHHHHHHHHhhCCCCCeEEecCCCCceEEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCccccc
Q 020053 1 MAEDRYNLKNPAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLL 80 (332)
Q Consensus 1 ma~~~~~m~~~a~kRL~kEl~~l~~~p~~gi~v~p~ednl~~W~v~I~GP~dTpYeGGiF~l~I~fP~~YP~~PP~V~Fl 80 (332)
||+. .|++.+.+||++|+++|+++++.||++.|.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.
T Consensus 1 m~~~--~~~~~~~~RL~kEl~~l~~~~~~~i~~~p~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~ 78 (156)
T 2e2c_A 1 MTTS--KERHSVSKRLQQELRTLLMSGDPGITAFPDGDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFT 78 (156)
T ss_dssp CCCC--CSCCCHHHHHHHHHHHHHHHCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEES
T ss_pred CCcc--ccchHHHHHHHHHHHHHHhCCCCCEEEEECCCCccEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEe
Confidence 6643 35556999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccccccccccCCceeecccccCCCCCCccccCCCeEEeecCCCCCCCCCCCCCHHHHHHHHHHhCCC-CCCCh
Q 020053 81 TVRCCSLMEHKSYCLCADYGVRTNVCAFFPPQPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGA 159 (332)
Q Consensus 81 T~~~~~~i~Hp~~~~~~~~~~~~n~~~~~h~~PNv~v~~~G~ICL~iL~~~~e~WsP~~ti~sVL~sI~~lL~~-nP~~~ 159 (332)
| +||| || |+.+|.|||++|. +.|+|+++|++||++|++||.+ ||+++
T Consensus 79 t-----~i~H----------------------Pn--v~~~G~iCl~iL~---~~W~p~~~i~~vL~si~~ll~~pn~~~p 126 (156)
T 2e2c_A 79 T-----PCWH----------------------PN--VDQSGNICLDILK---ENWTASYDVRTILLSLQSLLGEPNNASP 126 (156)
T ss_dssp S-----CCCB----------------------TT--BCTTCBBCCGGGT---TTCCTTCCHHHHHHHHHHHTTSCCCSSC
T ss_pred C-----Cccc----------------------CC--CccCceEECcccc---ccCCCCCcHHHHHHHHHHHHhCCCCCCH
Confidence 9 8888 99 6789999999997 8999999999999999999965 66666
Q ss_pred hh--hhHhhHHhHHHHHHHHHHHHhhhCC
Q 020053 160 LG--SLDYKKEERRALAIKSREAAPKFGT 186 (332)
Q Consensus 160 ~~--a~~~~~~dr~~y~~kare~~~kya~ 186 (332)
++ ++.++ +|++.|.++||+|+++|+.
T Consensus 127 ~n~~aa~~~-~d~~~y~~~~~~~~~~~~~ 154 (156)
T 2e2c_A 127 LNAQAADMW-SNQTEYKKVLHEKYKTAQS 154 (156)
T ss_dssp SCHHHHHHT-TCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHh-cCHHHHHHHHHHHHHHhcc
Confidence 55 56667 7999999999999999864
No 13
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=100.00 E-value=1.8e-39 Score=283.89 Aligned_cols=148 Identities=30% Similarity=0.539 Sum_probs=136.6
Q ss_pred CCChHHHHHHHHHHHHHhhC---CCCCeEEecCCCCceEEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccccccc
Q 020053 7 NLKNPAVKRILQEVKEMQSN---PSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTVR 83 (332)
Q Consensus 7 ~m~~~a~kRL~kEl~~l~~~---p~~gi~v~p~ednl~~W~v~I~GP~dTpYeGGiF~l~I~fP~~YP~~PP~V~FlT~~ 83 (332)
.|++.+.+||++|+++|+++ ++.|+.+.+.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|
T Consensus 4 ~Ms~~a~~RL~kEl~~l~~~~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t-- 81 (159)
T 2bep_A 4 AMANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFIT-- 81 (159)
T ss_dssp CCCHHHHHHHHHHHHHHHHCHHHHTTSEEEEECSSSSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESS--
T ss_pred cchHHHHHHHHHHHHHHHhcCCCCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEeCCCcCCCCCCEEEeeC--
Confidence 58889999999999999985 5789999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccccccccCCceeecccccCCCCCCcccc-CCCeEEeecCCCCCCCCCCCCCHHHHHHHHHHhCCC-CCCChhh
Q 020053 84 CCSLMEHKSYCLCADYGVRTNVCAFFPPQPNGRFE-TQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG 161 (332)
Q Consensus 84 ~~~~i~Hp~~~~~~~~~~~~n~~~~~h~~PNv~v~-~~G~ICL~iL~~~~e~WsP~~ti~sVL~sI~~lL~~-nP~~~~~ 161 (332)
+||| || |+ .+|+|||++|+ ++|+|+++|++||++|++||.+ +|+++++
T Consensus 82 ---~i~H----------------------Pn--i~~~~G~iCl~iL~---~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n 131 (159)
T 2bep_A 82 ---KIWH----------------------PN--ISSVTGAICLDILK---DQWAAAMTLRTVLLSLQALLAAAEPDDPQD 131 (159)
T ss_dssp ---CCCB----------------------TT--BCTTTCBBCCGGGT---TTCCTTCCHHHHHHHHHHHHHSCCTTSCSC
T ss_pred ---CCCc----------------------cC--CCCCCCEEeChhhh---ccCCCCCcHHHHHHHHHHHHhCCCCCCccc
Confidence 8888 99 55 58999999998 8899999999999999999964 6666655
Q ss_pred --hhHhhHHhHHHHHHHHHHHHhhhCC
Q 020053 162 --SLDYKKEERRALAIKSREAAPKFGT 186 (332)
Q Consensus 162 --a~~~~~~dr~~y~~kare~~~kya~ 186 (332)
++.++++|++.|.++||+|+++||.
T Consensus 132 ~~aa~~~~~~~~~f~~~a~~~~~~~a~ 158 (159)
T 2bep_A 132 AVVANQYKQNPEMFKQTARLWAHVYAG 158 (159)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHCHHHHHHHHHHHHHHhhc
Confidence 5777889999999999999999985
No 14
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=1.3e-39 Score=294.20 Aligned_cols=154 Identities=25% Similarity=0.479 Sum_probs=131.6
Q ss_pred CCcccCCCChHHHHHHHHHHHHHhhCCC-------------CCeEEecCCCCceEEEEEEeCCCCCCCCCCEEEEEEEcC
Q 020053 1 MAEDRYNLKNPAVKRILQEVKEMQSNPS-------------DDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLP 67 (332)
Q Consensus 1 ma~~~~~m~~~a~kRL~kEl~~l~~~p~-------------~gi~v~p~ednl~~W~v~I~GP~dTpYeGGiF~l~I~fP 67 (332)
||.....-.+.+.+||++||++|+++++ .||.+.+.++|+++|+++|.||++||||||+|+|+|.||
T Consensus 22 m~~~~~~~~~~a~~RL~kEl~~l~k~~~~~~~~p~~~~~~~~gi~v~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp 101 (193)
T 2f4z_A 22 MATAQPRGTPREQARLLKELADIQQLQRAHDSEPAATHSTSHGVSAQIVGGDIHRWRGFIAGPLGTPYEGGHFTLDIVIP 101 (193)
T ss_dssp ----------CHHHHHHHHHHHHHHC----------------CEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECC
T ss_pred ccccCCCCCCHHHHHHHHHHHHHHhCCCccccccccccCCCCcEEEEEcCCCcceEEEEEeCCCCCCcCCCEEEEEEECC
Confidence 5655555556689999999999999887 799999999999999999999999999999999999999
Q ss_pred CCCCCCCCccccccccccccccccccccccCCceeecccccCCCCCCcccc-CCCeEEeecCCCCCCCCCCCCCHHHHHH
Q 020053 68 AEYPFKPPSFMLLTVRCCSLMEHKSYCLCADYGVRTNVCAFFPPQPNGRFE-TQTKICLSISNHHPEHWQPSWSVRTALV 146 (332)
Q Consensus 68 ~~YP~~PP~V~FlT~~~~~~i~Hp~~~~~~~~~~~~n~~~~~h~~PNv~v~-~~G~ICL~iL~~~~e~WsP~~ti~sVL~ 146 (332)
++||++||+|+|+| +||| || |+ .+|.|||++|+ +.|+|+++|++||+
T Consensus 102 ~~YP~~PP~V~F~T-----~i~H----------------------PN--I~~~~G~ICL~iL~---~~WsP~~ti~~vL~ 149 (193)
T 2f4z_A 102 PDYPYNPPKMKFVT-----KIWH----------------------PN--ISSQTGAICLDILK---HEWSPALTIRTALL 149 (193)
T ss_dssp TTTTTSCCEEEESS-----CCCB----------------------TT--BCTTTCBBCCGGGT---TTCCTTSCHHHHHH
T ss_pred CcCCCCCCeEEEec-----CCcc----------------------CC--CcCCCCEEECcccc---ccCCCCCCHHHHHH
Confidence 99999999999999 8888 99 55 68999999998 88999999999999
Q ss_pred HHHHhCCC-CCCChhh--hhHhhHHhHHHHHHHHHHHHhhhCC
Q 020053 147 ALIAFMPT-NPNGALG--SLDYKKEERRALAIKSREAAPKFGT 186 (332)
Q Consensus 147 sI~~lL~~-nP~~~~~--a~~~~~~dr~~y~~kare~~~kya~ 186 (332)
+|++||.+ ||+++++ ++.+|++|++.|.++||+|+++||.
T Consensus 150 sI~sll~~pnp~~P~n~~aa~l~~~d~~~f~~~ar~~t~~ya~ 192 (193)
T 2f4z_A 150 SIQAMLADPVPTDPQDAEVAKMMIENHPLFVQTAKLWTETFAK 192 (193)
T ss_dssp HHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHcc
Confidence 99999965 6776665 5778889999999999999999985
No 15
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=100.00 E-value=2.3e-39 Score=282.87 Aligned_cols=149 Identities=23% Similarity=0.493 Sum_probs=133.5
Q ss_pred CChHHHHHHHHHHHHHhhCCCCCeEEecCC-----CCceEEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCccccccc
Q 020053 8 LKNPAVKRILQEVKEMQSNPSDDFMSLPLE-----ENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTV 82 (332)
Q Consensus 8 m~~~a~kRL~kEl~~l~~~p~~gi~v~p~e-----dnl~~W~v~I~GP~dTpYeGGiF~l~I~fP~~YP~~PP~V~FlT~ 82 (332)
|++.+.+||++|+++|+++++.||.+.|.+ +|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|
T Consensus 1 Ms~~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t- 79 (157)
T 2gjd_A 1 MSSLCLQRLQEERKKWRKDHPFGFYAKPVKKADGSMDLQKWEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKFPA- 79 (157)
T ss_dssp --CHHHHHHHHHHHHHHHCCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTBEEEEEEECCTTTTTSCCEEECCT-
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEEeccccCCCCcccEEEEEEECCCCCCcCCeEEEEEEEcCCCCCCCCCeeeccC-
Confidence 567899999999999999999999998875 48999999999999999999999999999999999999999999
Q ss_pred cccccccccccccccCCceeecccccCCCCCCccccCCCeEEeecCCCCCCCCCCCCCHHHHHHHHHHhCCC-CCCChhh
Q 020053 83 RCCSLMEHKSYCLCADYGVRTNVCAFFPPQPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG 161 (332)
Q Consensus 83 ~~~~~i~Hp~~~~~~~~~~~~n~~~~~h~~PNv~v~~~G~ICL~iL~~~~e~WsP~~ti~sVL~sI~~lL~~-nP~~~~~ 161 (332)
+||| || |+.+|.|||++|+.. ++|+|+++|++||++|++||.+ +|+++++
T Consensus 80 ----~i~H----------------------Pn--v~~~G~iCl~iL~~~-~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n 130 (157)
T 2gjd_A 80 ----GFYH----------------------PN--VYPSGTICLSILNED-QDWRPAITLKQIVLGVQDLLDSPNPNSPAQ 130 (157)
T ss_dssp ----TCCC----------------------TT--BCTTSBBCCGGGCTT-TTCCTTCCHHHHHHHHHHHHTSCCTTCCCC
T ss_pred ----CCcc----------------------CC--CCCCCcEeeecccCC-CCCCCCCcHHHHHHHHHHHHhCCCCCCccC
Confidence 8888 99 678999999999831 3799999999999999999954 5555554
Q ss_pred --hhHhhHHhHHHHHHHHHHHHhhhCC
Q 020053 162 --SLDYKKEERRALAIKSREAAPKFGT 186 (332)
Q Consensus 162 --a~~~~~~dr~~y~~kare~~~kya~ 186 (332)
++.++++|++.|.++||+|+++||+
T Consensus 131 ~~aa~~~~~~~~~y~~~~~~~~~~~a~ 157 (157)
T 2gjd_A 131 EPAWRSFSRNKAEYDKKVLLQAKQYSK 157 (157)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHTBC
T ss_pred HHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 5677789999999999999999984
No 16
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=100.00 E-value=3.5e-39 Score=282.85 Aligned_cols=147 Identities=29% Similarity=0.588 Sum_probs=134.4
Q ss_pred hHHHHHHHHHHHHHhhCCCCCeEEecCCC-CceEEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCccccccccccccc
Q 020053 10 NPAVKRILQEVKEMQSNPSDDFMSLPLEE-NIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTVRCCSLM 88 (332)
Q Consensus 10 ~~a~kRL~kEl~~l~~~p~~gi~v~p~ed-nl~~W~v~I~GP~dTpYeGGiF~l~I~fP~~YP~~PP~V~FlT~~~~~~i 88 (332)
+.|.+||++||++|+++++.||++.|.++ |+++|+++|.||++|||+||+|+++|.||++||++||+|+|.| +|
T Consensus 2 ~~a~~RL~kEl~~l~~~~~~gi~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t-----~i 76 (164)
T 3h8k_A 2 GTALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTC-----EM 76 (164)
T ss_dssp CHHHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECS-----CC
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEcC-----CC
Confidence 46899999999999999999999998866 9999999999999999999999999999999999999999999 88
Q ss_pred cccccccccCCceeecccccCCCCCCccccCCCeEEeecCCC----------CCCCCCCCCCHHHHHHHHHHhCCC-CCC
Q 020053 89 EHKSYCLCADYGVRTNVCAFFPPQPNGRFETQTKICLSISNH----------HPEHWQPSWSVRTALVALIAFMPT-NPN 157 (332)
Q Consensus 89 ~Hp~~~~~~~~~~~~n~~~~~h~~PNv~v~~~G~ICL~iL~~----------~~e~WsP~~ti~sVL~sI~~lL~~-nP~ 157 (332)
|| || |+.+|+|||++|+. +.++|+|+++|++||++|++||.+ ||+
T Consensus 77 ~H----------------------PN--V~~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~ti~~vL~~i~~ll~~pn~~ 132 (164)
T 3h8k_A 77 FH----------------------PN--IYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDE 132 (164)
T ss_dssp CC----------------------TT--BCTTSBBCCGGGSCSCSCCCSCCTTCCCCCTTCCHHHHHHHHHHHHHSCCCS
T ss_pred cc----------------------CC--CCCCCcEeeecccCcccccccccccccCCCCCCcHHHHHHHHHHHHcCCCCC
Confidence 88 99 67899999999963 237899999999999999999965 666
Q ss_pred Chhh--hhHhhHHhHHHHHHHHHHHHhhhC
Q 020053 158 GALG--SLDYKKEERRALAIKSREAAPKFG 185 (332)
Q Consensus 158 ~~~~--a~~~~~~dr~~y~~kare~~~kya 185 (332)
++++ ++.++++|+++|.++||+|++++.
T Consensus 133 ~p~n~~aa~~~~~~~~~f~~~~~~~~~~s~ 162 (164)
T 3h8k_A 133 SGANVDASKMWRDDREQFYKIAKQIVQKSL 162 (164)
T ss_dssp SCSSHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred CccCHHHHHHHHHCHHHHHHHHHHHHHHhh
Confidence 6655 677888999999999999999975
No 17
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=100.00 E-value=1.2e-39 Score=283.91 Aligned_cols=146 Identities=28% Similarity=0.586 Sum_probs=135.2
Q ss_pred HHHHHHHHHHHHHhhCCCCCeEEecCCCCceEEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCccccccccccccccc
Q 020053 11 PAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTVRCCSLMEH 90 (332)
Q Consensus 11 ~a~kRL~kEl~~l~~~p~~gi~v~p~ednl~~W~v~I~GP~dTpYeGGiF~l~I~fP~~YP~~PP~V~FlT~~~~~~i~H 90 (332)
.+.+||++|+++|+++++.||++.|.++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|+| +|||
T Consensus 5 ~~~~RL~kE~~~l~~~~~~~i~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t-----~i~H 79 (155)
T 1jat_A 5 SLPKRIIKETEKLVSDPVPGITAEPHDDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLT-----KIYH 79 (155)
T ss_dssp SCCHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTEEEEEEEECCTTTTTSCCEEEECS-----CCCB
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEECCCchhEEEEEEECCCCCCccCcEEEEEEEcCCCCCCCCCcceeec-----cccc
Confidence 46799999999999999999999999999999999999999999999999999999999999999999999 8888
Q ss_pred cccccccCCceeecccccCCCCCCccccCCCeEEeecCCCCCCCCCCCCCHHHHHHHHHHhCCC-CCCChhh--hhHhhH
Q 020053 91 KSYCLCADYGVRTNVCAFFPPQPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKK 167 (332)
Q Consensus 91 p~~~~~~~~~~~~n~~~~~h~~PNv~v~~~G~ICL~iL~~~~e~WsP~~ti~sVL~sI~~lL~~-nP~~~~~--a~~~~~ 167 (332)
|| |+.+|.|||++|. ++|+|+++|++||++|++||.+ ||+++++ ++.+++
T Consensus 80 ----------------------Pn--v~~~G~iCl~iL~---~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~ 132 (155)
T 1jat_A 80 ----------------------PN--IDRLGRICLDVLK---TNWSPALQIRTVLLSIQALLASPNPNDPLANDVAEDWI 132 (155)
T ss_dssp ----------------------TT--BCTTCCBCCGGGT---TTCCTTCCHHHHHHHHHHHHHSCCTTSTTCCTTHHHHH
T ss_pred ----------------------CC--CCCCCEEEchhhc---cCCCCCCCHHHHHHHHHHHHhCCCCCCcccHHHHHHHH
Confidence 99 6789999999997 8999999999999999999964 6666665 567778
Q ss_pred HhHHHHHHHHHHHHhhhCChh
Q 020053 168 EERRALAIKSREAAPKFGTPE 188 (332)
Q Consensus 168 ~dr~~y~~kare~~~kya~~~ 188 (332)
+|++.|.++||+|+++||...
T Consensus 133 ~~~~~f~~~~r~~~~~~a~~~ 153 (155)
T 1jat_A 133 KNEQGAKAKAREWTKLYAKKK 153 (155)
T ss_dssp HCHHHHHHHHHHHHHHHSEEC
T ss_pred HCHHHHHHHHHHHHHHhcccC
Confidence 999999999999999999653
No 18
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=100.00 E-value=3.8e-39 Score=283.73 Aligned_cols=148 Identities=24% Similarity=0.491 Sum_probs=134.4
Q ss_pred ChHHHHHHHHHHHHHhhCCCCCeEEecCCC-----CceEEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccccccc
Q 020053 9 KNPAVKRILQEVKEMQSNPSDDFMSLPLEE-----NIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTVR 83 (332)
Q Consensus 9 ~~~a~kRL~kEl~~l~~~p~~gi~v~p~ed-----nl~~W~v~I~GP~dTpYeGGiF~l~I~fP~~YP~~PP~V~FlT~~ 83 (332)
+.+|.+||++||++|++++++||++.|.++ |+++|+++|.||++||||||+|+++|.||++||++||+|+|+|
T Consensus 8 ~~~~~~RL~kEl~~l~~~~p~gi~~~p~~~~d~~~nl~~W~~~I~Gp~~Tpyegg~f~l~i~fp~~YP~~pP~v~F~t-- 85 (163)
T 3rcz_B 8 SSLCKTRLQEERKQWRRDHPFGFYAKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTP-- 85 (163)
T ss_dssp -CHHHHHHHHHHHHHHHSCCTTCEEEEEECTTSSEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESS--
T ss_pred cHHHHHHHHHHHHHHHhCCCCCEEEEEccCcCCCCCccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCEEEEeC--
Confidence 567999999999999999999999999866 9999999999999999999999999999999999999999999
Q ss_pred ccccccccccccccCCceeecccccCCCCCCccccCCCeEEeecCCCCCCCCCCCCCHHHHHHHHHHhCCC-CCCChhh-
Q 020053 84 CCSLMEHKSYCLCADYGVRTNVCAFFPPQPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG- 161 (332)
Q Consensus 84 ~~~~i~Hp~~~~~~~~~~~~n~~~~~h~~PNv~v~~~G~ICL~iL~~~~e~WsP~~ti~sVL~sI~~lL~~-nP~~~~~- 161 (332)
+||| || |+.+|+|||++|+. .++|+|+++|++||++|++||.+ ||+++++
T Consensus 86 ---~i~H----------------------Pn--V~~~G~iCl~iL~~-~~~W~p~~ti~~vL~~i~~ll~~P~~~~p~n~ 137 (163)
T 3rcz_B 86 ---PLFH----------------------PN--VYPSGTVCLSILNE-EEGWKPAITIKQILLGIQDLLDDPNIASPAQT 137 (163)
T ss_dssp ---CCCS----------------------TT--BCTTSBBCCGGGCT-TTTCCTTCCHHHHHHHHHHHHTSCCTTSCSCH
T ss_pred ---CCcc----------------------CC--CCCCCcEeccccCC-CCCcCCcCcHHHHHHHHHHHHhCCCCCCccCH
Confidence 8888 99 67899999999972 24699999999999999999954 5566554
Q ss_pred -hhHhhHHhHHHHHHHHHHHHhhhCC
Q 020053 162 -SLDYKKEERRALAIKSREAAPKFGT 186 (332)
Q Consensus 162 -a~~~~~~dr~~y~~kare~~~kya~ 186 (332)
++.++++|+++|.+++|+|+++||.
T Consensus 138 ~aa~~~~~d~~~y~~~~r~~~~~ya~ 163 (163)
T 3rcz_B 138 EAYTMFKKDKVEYEKRVRAQARENAP 163 (163)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHCHHHHHHHHHHHHHHhCc
Confidence 5677889999999999999999974
No 19
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=100.00 E-value=1e-39 Score=282.36 Aligned_cols=143 Identities=27% Similarity=0.534 Sum_probs=132.6
Q ss_pred HHHHHHHHHHHHhhCCCCCeEEecCCC-CceEEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCccccccccccccccc
Q 020053 12 AVKRILQEVKEMQSNPSDDFMSLPLEE-NIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTVRCCSLMEH 90 (332)
Q Consensus 12 a~kRL~kEl~~l~~~p~~gi~v~p~ed-nl~~W~v~I~GP~dTpYeGGiF~l~I~fP~~YP~~PP~V~FlT~~~~~~i~H 90 (332)
+.+||++|+++|+++++.|+++.+.++ |+++|+++|.||++|||+||+|+++|.||++||++||+|+|.| +|||
T Consensus 2 ~~~RL~~El~~l~~~~~~~i~~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t-----~i~H 76 (149)
T 1fxt_A 2 RAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDT-----KVYH 76 (149)
T ss_dssp CHHHHHHHHHHHHHCGGGCCEEEESSSSCSSEEEEEEECCSSSTTCSSEEEEEEECCTTTTSSCCEEEESS-----CCCB
T ss_pred hHHHHHHHHHHHHhCCCCCEEEEECCCCCceEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeC-----CCcc
Confidence 579999999999999999999999887 9999999999999999999999999999999999999999999 8888
Q ss_pred cccccccCCceeecccccCCCCCCccccC-CCeEEeecCCCCCCCCCCCCCHHHHHHHHHHhCCC-CCCChhh--hhHhh
Q 020053 91 KSYCLCADYGVRTNVCAFFPPQPNGRFET-QTKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYK 166 (332)
Q Consensus 91 p~~~~~~~~~~~~n~~~~~h~~PNv~v~~-~G~ICL~iL~~~~e~WsP~~ti~sVL~sI~~lL~~-nP~~~~~--a~~~~ 166 (332)
|| |+. +|.|||++|. ++|+|+++|++||++|++||.+ ||+++++ ++.++
T Consensus 77 ----------------------Pn--i~~~~G~iCl~iL~---~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~ 129 (149)
T 1fxt_A 77 ----------------------PN--ISSVTGAICLDILK---NAWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHY 129 (149)
T ss_dssp ----------------------TT--BCSSSCCBCCHHHH---TSCCTTCCHHHHHHHHHHHHHSCCSSSCSSHHHHHHH
T ss_pred ----------------------CC--CcCCCCeEeCCcCC---CCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHH
Confidence 99 566 8999999997 8999999999999999999964 6666655 57788
Q ss_pred HHhHHHHHHHHHHHHhhhCC
Q 020053 167 KEERRALAIKSREAAPKFGT 186 (332)
Q Consensus 167 ~~dr~~y~~kare~~~kya~ 186 (332)
++|++.|.++||+|+++||+
T Consensus 130 ~~d~~~f~~~a~~~~~~~a~ 149 (149)
T 1fxt_A 130 LRDRESFNKTAALWTRLYAS 149 (149)
T ss_dssp HHCSSHHHHHHHHHHHHHCC
T ss_pred HHCHHHHHHHHHHHHHHhcC
Confidence 89999999999999999984
No 20
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=100.00 E-value=5e-39 Score=281.74 Aligned_cols=150 Identities=25% Similarity=0.499 Sum_probs=135.7
Q ss_pred CCChHHHHHHHHHHHHHhhCCCCCeEEecCC-----CCceEEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccccc
Q 020053 7 NLKNPAVKRILQEVKEMQSNPSDDFMSLPLE-----ENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLT 81 (332)
Q Consensus 7 ~m~~~a~kRL~kEl~~l~~~p~~gi~v~p~e-----dnl~~W~v~I~GP~dTpYeGGiF~l~I~fP~~YP~~PP~V~FlT 81 (332)
+|++.+.+||++|+++|+++++.||.+.|.+ +|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|
T Consensus 3 ~M~~~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t 82 (161)
T 2grr_A 3 HMSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEP 82 (161)
T ss_dssp -CCHHHHHHHHHHHHHHHHSCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESS
T ss_pred cccHHHHHHHHHHHHHHHhCCCCCEEEEeccccCCCCCccEEEEEEECCCCCCccCCEEEEEEEcCcccCCCCCEEEEec
Confidence 5888999999999999999999999998863 68999999999999999999999999999999999999999999
Q ss_pred ccccccccccccccccCCceeecccccCCCCCCccccCCCeEEeecCCCCCCCCCCCCCHHHHHHHHHHhCCC-CCCChh
Q 020053 82 VRCCSLMEHKSYCLCADYGVRTNVCAFFPPQPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGAL 160 (332)
Q Consensus 82 ~~~~~~i~Hp~~~~~~~~~~~~n~~~~~h~~PNv~v~~~G~ICL~iL~~~~e~WsP~~ti~sVL~sI~~lL~~-nP~~~~ 160 (332)
+||| || |+.+|.|||++|+. .++|+|+++|++||++|++||.+ ++++++
T Consensus 83 -----~i~H----------------------Pn--v~~~G~iCl~iL~~-~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~ 132 (161)
T 2grr_A 83 -----PLFH----------------------PN--VYPSGTVCLSILEE-DKDWRPAITIKQILLGIQELLNEPNIQSPA 132 (161)
T ss_dssp -----CCCS----------------------TT--BCTTSBBCCGGGCT-TTTCCTTCCHHHHHHHHHHHHHSCCTTSCS
T ss_pred -----Cccc----------------------CC--CCCCCeEeehhcCC-CCCcCCCCcHHHHHHHHHHHHhCCCCCCcc
Confidence 8888 99 57899999999972 24899999999999999999964 555555
Q ss_pred h--hhHhhHHhHHHHHHHHHHHHhhhCC
Q 020053 161 G--SLDYKKEERRALAIKSREAAPKFGT 186 (332)
Q Consensus 161 ~--a~~~~~~dr~~y~~kare~~~kya~ 186 (332)
+ ++.++++|+++|.+++|+|+++|+.
T Consensus 133 n~~aa~~~~~~~~~y~~~~~~~~~~~a~ 160 (161)
T 2grr_A 133 QAEAYTIYCQNRVEYEKRVRAQAKKFAP 160 (161)
T ss_dssp CHHHHHHHHHCHHHHHHHHHHHHHHTCC
T ss_pred CHHHHHHHHHCHHHHHHHHHHHHHHHhc
Confidence 4 5777889999999999999999985
No 21
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=100.00 E-value=6e-39 Score=290.33 Aligned_cols=148 Identities=30% Similarity=0.540 Sum_probs=135.8
Q ss_pred CChHHHHHHHHHHHHHhhC---CCCCeEEecCCCCceEEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCccccccccc
Q 020053 8 LKNPAVKRILQEVKEMQSN---PSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTVRC 84 (332)
Q Consensus 8 m~~~a~kRL~kEl~~l~~~---p~~gi~v~p~ednl~~W~v~I~GP~dTpYeGGiF~l~I~fP~~YP~~PP~V~FlT~~~ 84 (332)
|++.|.+||++||++|+++ ++.|+++.|.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|
T Consensus 2 Ms~~a~~Rl~kEl~~l~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t--- 78 (201)
T 3k9o_A 2 MANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFIT--- 78 (201)
T ss_dssp --CTTHHHHHHHHHHHHTCHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESS---
T ss_pred CcHHHHHHHHHHHHHHHhCCCCCCCCEEEEECCCCccEEEEEEECCCCCCCCCCEEEEEEECCCcCCCCCCcccccc---
Confidence 7778999999999999987 3679999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccccccCCceeecccccCCCCCCcccc-CCCeEEeecCCCCCCCCCCCCCHHHHHHHHHHhCCC-CCCChhh-
Q 020053 85 CSLMEHKSYCLCADYGVRTNVCAFFPPQPNGRFE-TQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG- 161 (332)
Q Consensus 85 ~~~i~Hp~~~~~~~~~~~~n~~~~~h~~PNv~v~-~~G~ICL~iL~~~~e~WsP~~ti~sVL~sI~~lL~~-nP~~~~~- 161 (332)
+||| || |+ .+|.|||++|. ++|+|+++|++||++|++||.+ ||+++++
T Consensus 79 --~i~H----------------------Pn--v~~~~G~iCl~iL~---~~W~p~~~i~~vL~~i~~ll~~p~p~~p~n~ 129 (201)
T 3k9o_A 79 --KIWH----------------------PN--ISSVTGAICLDILK---DQWAAAMTLRTVLLSLQALLAAAEPDDPQDA 129 (201)
T ss_dssp --CCCB----------------------TT--BCTTTCBBCCGGGT---TTCCTTCCHHHHHHHHHHHHHSCCTTSCSCH
T ss_pred --Cccc----------------------CC--CcCCCCeeeCcccc---cCCCCCCCHHHHHHHHHHHhcCCCCCCcccH
Confidence 8888 99 56 58999999997 8999999999999999999965 7777765
Q ss_pred -hhHhhHHhHHHHHHHHHHHHhhhCCh
Q 020053 162 -SLDYKKEERRALAIKSREAAPKFGTP 187 (332)
Q Consensus 162 -a~~~~~~dr~~y~~kare~~~kya~~ 187 (332)
++.+|++|++.|.++||+|+++|+..
T Consensus 130 ~aa~~~~~~~~~f~~~a~~~~~~~a~~ 156 (201)
T 3k9o_A 130 VVANQYKQNPEMFKQTARLWAHVYAGA 156 (201)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHCHHHHHHHHHHHHHHhccc
Confidence 57888899999999999999999975
No 22
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=100.00 E-value=1.4e-38 Score=287.63 Aligned_cols=145 Identities=28% Similarity=0.578 Sum_probs=135.9
Q ss_pred hHHHHHHHHHHHHHhhCCCCCeEEecCCCCceEEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccccccccccccc
Q 020053 10 NPAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTVRCCSLME 89 (332)
Q Consensus 10 ~~a~kRL~kEl~~l~~~p~~gi~v~p~ednl~~W~v~I~GP~dTpYeGGiF~l~I~fP~~YP~~PP~V~FlT~~~~~~i~ 89 (332)
+.+.+||++||++|+++++.||.+.|.++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|+| +||
T Consensus 47 s~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T-----~i~ 121 (194)
T 3bzh_A 47 STSAKRIQKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRT-----RIY 121 (194)
T ss_dssp HHHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESS-----CCC
T ss_pred cHHHHHHHHHHHHHHhCCCCCceeecccCccccceEEEeCCCCCCccCCEEEEEEECCCcCCCCCccccccC-----CCc
Confidence 568999999999999999999999999999999999999999999999999999999999999999999999 888
Q ss_pred ccccccccCCceeecccccCCCCCCccccCCCeEEeecCCCCCCCCCCCCCHHHHHHHHHHhCCC-CCCChhh--hhHhh
Q 020053 90 HKSYCLCADYGVRTNVCAFFPPQPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYK 166 (332)
Q Consensus 90 Hp~~~~~~~~~~~~n~~~~~h~~PNv~v~~~G~ICL~iL~~~~e~WsP~~ti~sVL~sI~~lL~~-nP~~~~~--a~~~~ 166 (332)
| || |+.+|.|||++|. +.|+|.++|++||++|++||.+ ||+++++ ++.++
T Consensus 122 H----------------------PN--V~~~G~ICL~iL~---~~WsP~~ti~~vL~sI~~ll~~pnp~~Pln~~aa~l~ 174 (194)
T 3bzh_A 122 H----------------------CN--INSQGVICLDILK---DNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQY 174 (194)
T ss_dssp B----------------------TT--BCTTCBBCCGGGT---TTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHH
T ss_pred c----------------------ce--ECCCCceechhhh---ccCCCcCcHHHHHHHHHHHHhCCCCccchhHHHHHHH
Confidence 8 99 6789999999997 8999999999999999999965 7777665 57778
Q ss_pred HHhHHHHHHHHHHHHhhhCC
Q 020053 167 KEERRALAIKSREAAPKFGT 186 (332)
Q Consensus 167 ~~dr~~y~~kare~~~kya~ 186 (332)
++|+++|.++||+|+++|++
T Consensus 175 ~~d~~~f~~~ar~~t~~ya~ 194 (194)
T 3bzh_A 175 MTNRAEHDRMARQWTKRYAT 194 (194)
T ss_dssp HHCHHHHHHHHHHHHHHHCC
T ss_pred HHCHHHHHHHHHHHHHHhhC
Confidence 89999999999999999984
No 23
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=100.00 E-value=4.9e-39 Score=295.04 Aligned_cols=153 Identities=26% Similarity=0.553 Sum_probs=139.2
Q ss_pred CCCChHHHHHHHHHHHHHhhCCCCCeEEecCCCCceEEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccccccccc
Q 020053 6 YNLKNPAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTVRCC 85 (332)
Q Consensus 6 ~~m~~~a~kRL~kEl~~l~~~p~~gi~v~p~ednl~~W~v~I~GP~dTpYeGGiF~l~I~fP~~YP~~PP~V~FlT~~~~ 85 (332)
..+.+.+.+||++||++|+++++.||++.|.++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|.|
T Consensus 18 ~~~~s~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T---- 93 (216)
T 2pwq_A 18 YFQGSKELLRLQKELKDIENENVQEIDAHIKDSNFFEWVGFIKGPEGTPYEGGHFTLAITIPNDYPYNPPKIKFVT---- 93 (216)
T ss_dssp -CCSCHHHHHHHHHHHHHHHSCTTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESS----
T ss_pred ccccCHHHHHHHHHHHHHHhCCCCCEEEEEcCCccceeEEEEeCCCCCCccceEEEEEEECCCcCCCCCCcccccC----
Confidence 3456789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccccccCCceeecccccCCCCCCcccc-CCCeEEeecCCCCCCCCCCCCCHHHHHHHHHHhCCC-CCCChhh--
Q 020053 86 SLMEHKSYCLCADYGVRTNVCAFFPPQPNGRFE-TQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG-- 161 (332)
Q Consensus 86 ~~i~Hp~~~~~~~~~~~~n~~~~~h~~PNv~v~-~~G~ICL~iL~~~~e~WsP~~ti~sVL~sI~~lL~~-nP~~~~~-- 161 (332)
+||| || |+ .+|.|||++|+ +.|+|+++|++||++|++||.+ ||+++++
T Consensus 94 -~i~H----------------------PN--I~~~~G~ICL~iL~---~~WsP~~ti~~VL~sI~sLL~~Pnp~dPln~e 145 (216)
T 2pwq_A 94 -KIWH----------------------PN--ISSQTGAICLDVLK---NEWSPALTIRTALLSIQALLSDPQPDDPQDAE 145 (216)
T ss_dssp -CCCB----------------------TT--BCTTTCBBCCHHHH---HHCCTTCCHHHHHHHHHHHHHSCCTTSCSCHH
T ss_pred -CCcC----------------------CC--CcCCCCEEEchhhc---ccCCCCCcHHHHHHHHHHHHhCCCCCCcccHH
Confidence 8888 99 55 58999999997 8899999999999999999965 6777765
Q ss_pred hhHhhHHhHHHHHHHHHHHHhhhCChhHH
Q 020053 162 SLDYKKEERRALAIKSREAAPKFGTPERQ 190 (332)
Q Consensus 162 a~~~~~~dr~~y~~kare~~~kya~~~~~ 190 (332)
++.+|++|++.|.++||+|+++|+.....
T Consensus 146 aa~~~~~d~~~f~~~ar~~t~~ya~~~~~ 174 (216)
T 2pwq_A 146 VAKMYKENHALFVKTASVWTKTFATGPKE 174 (216)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHHHSCCC--
T ss_pred HHHHHHHCHHHHHHHHHHHHHHhcCCCcc
Confidence 57778899999999999999999987654
No 24
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=100.00 E-value=3.9e-38 Score=295.22 Aligned_cols=152 Identities=30% Similarity=0.544 Sum_probs=139.9
Q ss_pred ccCCCChHHHHHHHHHHHHHhhC---CCCCeEEecCCCCceEEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCccccc
Q 020053 4 DRYNLKNPAVKRILQEVKEMQSN---PSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLL 80 (332)
Q Consensus 4 ~~~~m~~~a~kRL~kEl~~l~~~---p~~gi~v~p~ednl~~W~v~I~GP~dTpYeGGiF~l~I~fP~~YP~~PP~V~Fl 80 (332)
.+.+|++.+.+||++||++|+++ ++.||++.|.++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|.
T Consensus 50 s~~~Ms~~a~~RL~kEl~~l~~~~~~~~~gi~v~p~~dnl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~ 129 (253)
T 3e46_A 50 SEFDMANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFI 129 (253)
T ss_dssp --CCCCHHHHHHHHHHHHHHHHCHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEES
T ss_pred ccccccHHHHHHHHHHHHHHHhCCCCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCeeeec
Confidence 35789999999999999999987 467999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccccccccccCCceeecccccCCCCCCcccc-CCCeEEeecCCCCCCCCCCCCCHHHHHHHHHHhCCC-CCCC
Q 020053 81 TVRCCSLMEHKSYCLCADYGVRTNVCAFFPPQPNGRFE-TQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNG 158 (332)
Q Consensus 81 T~~~~~~i~Hp~~~~~~~~~~~~n~~~~~h~~PNv~v~-~~G~ICL~iL~~~~e~WsP~~ti~sVL~sI~~lL~~-nP~~ 158 (332)
| +||| || |+ .+|.|||++|. ++|+|+++|++||++|++||.+ ||++
T Consensus 130 T-----~i~H----------------------PN--V~~~~G~ICL~iL~---~~WsP~~ti~~vL~sI~~ll~~pnp~~ 177 (253)
T 3e46_A 130 T-----KIWH----------------------PN--ISSVTGAICLDILK---DQWAAAMTLRTVLLSLQALLAAAEPDD 177 (253)
T ss_dssp S-----CCCB----------------------TT--BCTTTCBBCCGGGT---TCCCTTCCHHHHHHHHHHHHHSCCTTS
T ss_pred C-----CCcc----------------------CC--ccCCCCeeeccccc---CCCCCCCCHHHHHHHHHHHhcCCCCCC
Confidence 9 8888 99 56 58999999997 8999999999999999999965 7777
Q ss_pred hhh--hhHhhHHhHHHHHHHHHHHHhhhCCh
Q 020053 159 ALG--SLDYKKEERRALAIKSREAAPKFGTP 187 (332)
Q Consensus 159 ~~~--a~~~~~~dr~~y~~kare~~~kya~~ 187 (332)
+++ ++.+|++|++.|.++||+|+++|+..
T Consensus 178 Pln~eaa~l~~~d~~~f~~~ar~~t~~yA~~ 208 (253)
T 3e46_A 178 PQDAVVANQYKQNPEMFKQTARLWAHVYAGA 208 (253)
T ss_dssp CSCHHHHHHHHHCHHHHHHHHHHHHHHHHCC
T ss_pred hhhHHHHHHHHHCHHHHHHHHHHHHHHhccc
Confidence 765 57888899999999999999999975
No 25
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.2e-38 Score=284.76 Aligned_cols=149 Identities=27% Similarity=0.476 Sum_probs=133.9
Q ss_pred CCChHHHHHHHHHHHHHhhCCCCCeEEecCCCCceEEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCccccccccccc
Q 020053 7 NLKNPAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTVRCCS 86 (332)
Q Consensus 7 ~m~~~a~kRL~kEl~~l~~~p~~gi~v~p~ednl~~W~v~I~GP~dTpYeGGiF~l~I~fP~~YP~~PP~V~FlT~~~~~ 86 (332)
+|++.+.+||++||++|+++++.||++.|.++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|+|
T Consensus 26 ~~~~~~~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T----- 100 (179)
T 1i7k_A 26 AARGPVGKRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLT----- 100 (179)
T ss_dssp ----CHHHHHHHHHHHHHHHCCTTEEEEEETTEEEEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEESS-----
T ss_pred ccChHHHHHHHHHHHHHHhCCCCCEEEEEcCCcccccEEEEECCCCCCcCCCEEEEEEECCCcCCCCCceEEEec-----
Confidence 377889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccccCCceeecccccCCCCCCccccCCCeEEeecCCCCCCCCCCCCCHHHHHHHHHHhCCC-CCCChhh--hh
Q 020053 87 LMEHKSYCLCADYGVRTNVCAFFPPQPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SL 163 (332)
Q Consensus 87 ~i~Hp~~~~~~~~~~~~n~~~~~h~~PNv~v~~~G~ICL~iL~~~~e~WsP~~ti~sVL~sI~~lL~~-nP~~~~~--a~ 163 (332)
+||| || |+.+|+|||++|. +.|+|+++|++||++|++||.+ ||+++++ ++
T Consensus 101 ~i~H----------------------PN--V~~~G~ICL~iL~---~~WsP~~ti~~vL~sI~sll~~Pn~~~Pln~~aa 153 (179)
T 1i7k_A 101 PCYH----------------------PN--VDTQGNISLDILK---EKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAA 153 (179)
T ss_dssp CCCS----------------------TT--BCTTCBBCCGGGT---TTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHH
T ss_pred CCcc----------------------Cc--cccCCeEEcccCc---CcCCCCCCHHHHHHHHHHHHhCCCCcchhhHHHH
Confidence 8888 99 6789999999997 8999999999999999999964 6666655 56
Q ss_pred HhhHHhHHHHHHHHHHHHhhhCChh
Q 020053 164 DYKKEERRALAIKSREAAPKFGTPE 188 (332)
Q Consensus 164 ~~~~~dr~~y~~kare~~~kya~~~ 188 (332)
.++ +|+++|.+++++++++++...
T Consensus 154 ~l~-~d~~~f~~~v~~~v~~~~~~~ 177 (179)
T 1i7k_A 154 ELW-KNPTAFKKYLQETYSKQVTSQ 177 (179)
T ss_dssp HHT-TSHHHHHHHHHHHHHTTCC--
T ss_pred HHh-hCHHHHHHHHHHHHHHHhccc
Confidence 777 999999999999999988653
No 26
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=100.00 E-value=4.7e-38 Score=276.62 Aligned_cols=151 Identities=19% Similarity=0.371 Sum_probs=135.8
Q ss_pred CCCChHHHHHHHHHHHHHhhCCCCCeEEecC-CCCceEEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCccccccccc
Q 020053 6 YNLKNPAVKRILQEVKEMQSNPSDDFMSLPL-EENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTVRC 84 (332)
Q Consensus 6 ~~m~~~a~kRL~kEl~~l~~~p~~gi~v~p~-ednl~~W~v~I~GP~dTpYeGGiF~l~I~fP~~YP~~PP~V~FlT~~~ 84 (332)
.+..+.+.+||++||++|+++++.||++.+. ++|++.|+++| ||++|||+||+|+++|.||++||++||+|+|+|
T Consensus 9 ~~~~s~~~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t--- 84 (167)
T 3fn1_B 9 TRRVSVRDKLLVKEVAELEANLPCTCKVHFPDPNKLHCFQLTV-TPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLT--- 84 (167)
T ss_dssp CCCCCHHHHHHHHHHHHHGGGSCTTEEEECSSSSCTTEEEEEE-CCSSSTTTTCCEEEEEECCTTBTTBCCEEEECS---
T ss_pred ccchhHHHHHHHHHHHHHHhCCCCCEEEEeCCCCcceeEEEEE-CCCCCccCCCEEEEEEECCCCCCCCCCeeEecC---
Confidence 3455679999999999999999999999854 68999999999 899999999999999999999999999999999
Q ss_pred cccccccccccccCCceeecccccCCCCCCccccCCCeEEeecCCCC---CCCCCCCCCHHHHHHHHHHhCCC--CCCCh
Q 020053 85 CSLMEHKSYCLCADYGVRTNVCAFFPPQPNGRFETQTKICLSISNHH---PEHWQPSWSVRTALVALIAFMPT--NPNGA 159 (332)
Q Consensus 85 ~~~i~Hp~~~~~~~~~~~~n~~~~~h~~PNv~v~~~G~ICL~iL~~~---~e~WsP~~ti~sVL~sI~~lL~~--nP~~~ 159 (332)
+||| || |+.+|+|||++|+.+ +++|+|+++|++||++|++||.+ ||+++
T Consensus 85 --~i~H----------------------Pn--v~~~G~iCl~iL~~~~~~~~~W~p~~~i~~vl~~i~~ll~~~pn~~~p 138 (167)
T 3fn1_B 85 --KIWH----------------------PN--ITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDP 138 (167)
T ss_dssp --CCCC----------------------SS--BCTTCCBCCGGGSBCSSSTTSBCTTCCHHHHHHHHHHTTTTTCCSSSC
T ss_pred --Cccc----------------------CC--CCCCCEEechhhccCCCCCCCCCCcCcHHHHHHHHHHHHcCCCCCCcc
Confidence 8888 99 678999999999843 35899999999999999999976 56666
Q ss_pred hh--hhHhhHHhHHHHHHHHHHHHhhhCC
Q 020053 160 LG--SLDYKKEERRALAIKSREAAPKFGT 186 (332)
Q Consensus 160 ~~--a~~~~~~dr~~y~~kare~~~kya~ 186 (332)
++ ++.++++|++.|.++||+|+++||.
T Consensus 139 ~n~eaa~~~~~~~~~f~~~~r~~~~~~A~ 167 (167)
T 3fn1_B 139 LNIEAAEHHLRDKEDFRNKVDDYIKRYAR 167 (167)
T ss_dssp SCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred hhHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 55 5778889999999999999999984
No 27
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=100.00 E-value=2.7e-38 Score=275.06 Aligned_cols=146 Identities=26% Similarity=0.492 Sum_probs=133.3
Q ss_pred HHHHHHHHHHHHHhhCCCCCeEE-ecCCCCceEEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccccccccccccc
Q 020053 11 PAVKRILQEVKEMQSNPSDDFMS-LPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTVRCCSLME 89 (332)
Q Consensus 11 ~a~kRL~kEl~~l~~~p~~gi~v-~p~ednl~~W~v~I~GP~dTpYeGGiF~l~I~fP~~YP~~PP~V~FlT~~~~~~i~ 89 (332)
.+.+||++|+++|+++++.||.+ .+.++|+++|+++|. |++|||+||+|+++|.||++||++||+|+|.| +||
T Consensus 4 ~~~~RL~kEl~~l~~~~~~~i~~~~~~~~~l~~w~~~I~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t-----~i~ 77 (155)
T 1wzv_A 4 MASMRVVKELEDLQKKPPPYLRNLSSDDANVLVWHALLL-PDQPPYHLKAFNLRISFPPEYPFKPPMIKFTT-----KIY 77 (155)
T ss_dssp -CHHHHHHHHHHHHHSCCTTEEEEEECSSCTTEEEEEEC-CCSTTGGGEEEEEEEECCTTTTSSCCEEEESS-----CCC
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEEecCCCchheEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCCcceeeC-----CCc
Confidence 47899999999999999999999 888999999999999 99999999999999999999999999999999 888
Q ss_pred ccccccccCCceeecccccCCCCCCccccCCCeEEeecCCCCCCCCCCCCCHHHHHHHHHHhCCC-CCCChhh--hhHhh
Q 020053 90 HKSYCLCADYGVRTNVCAFFPPQPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYK 166 (332)
Q Consensus 90 Hp~~~~~~~~~~~~n~~~~~h~~PNv~v~~~G~ICL~iL~~~~e~WsP~~ti~sVL~sI~~lL~~-nP~~~~~--a~~~~ 166 (332)
| || |+.+|.|||++|+ .++|+|+++|++||++|++||.+ ||+++++ ++.++
T Consensus 78 H----------------------Pn--V~~~G~iCl~iL~--~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~ 131 (155)
T 1wzv_A 78 H----------------------PN--VDENGQICLPIIS--SENWKPCTKTCQVLEALNVLVNRPNIREPLRMDLADLL 131 (155)
T ss_dssp B----------------------TT--BCTTCBCCCGGGC--TTTCCTTCCHHHHHHHHHHHHHSCCSSSCSSHHHHHHH
T ss_pred c----------------------Cc--CCCCCeEeecCCC--ccCCCCCCcHHHHHHHHHHHHhCCCCCchHHHHHHHHH
Confidence 8 99 6789999999993 28999999999999999999964 6666655 56778
Q ss_pred HHhHHHHHHHHHHHHhhhCChh
Q 020053 167 KEERRALAIKSREAAPKFGTPE 188 (332)
Q Consensus 167 ~~dr~~y~~kare~~~kya~~~ 188 (332)
++|++.|.++||+|+++|+...
T Consensus 132 ~~~~~~y~~~~r~~~~~~a~~~ 153 (155)
T 1wzv_A 132 TQNPELFRKNAEEFTLRFGVDR 153 (155)
T ss_dssp HHCHHHHHHHHHHHHHHHCEEC
T ss_pred HHHHHHHHHHHHHHHHHhcccC
Confidence 8999999999999999999753
No 28
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2e-38 Score=280.80 Aligned_cols=149 Identities=17% Similarity=0.410 Sum_probs=135.0
Q ss_pred cCCCChHHHHHHHHHHHHHhhCCCCCeEEecCCCCceEEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCccccccccc
Q 020053 5 RYNLKNPAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTVRC 84 (332)
Q Consensus 5 ~~~m~~~a~kRL~kEl~~l~~~p~~gi~v~p~ednl~~W~v~I~GP~dTpYeGGiF~l~I~fP~~YP~~PP~V~FlT~~~ 84 (332)
..+|++.+.+||++|+++|+++++.||.+.|.++|+++|+++|.||++||||||+|+|+|.||++||++||+|+|+|
T Consensus 17 ~~~M~~~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T--- 93 (169)
T 1yrv_A 17 RGSMHGRAYLLLHRDFCDLKENNYKGITAKPVSEDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFIT--- 93 (169)
T ss_dssp TTGGGCHHHHHHHHHHHHHHHHCCTTEEEEECSTTSCEEEEEEECCTTSTTTTCEEEEEEECCTTBTTBCCEEEESS---
T ss_pred cCccChHHHHHHHHHHHHHHhCCCCCEEEEEcCCccccceeEEECCCCCCccceEEEEEEECCccCCCCCCcceecC---
Confidence 56788899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccccccCCceeecccccCCCCCCccccCCCeEEeecCCCCCCCCCCCCCHHHHHHHHHHhCCC-CCCChhh--
Q 020053 85 CSLMEHKSYCLCADYGVRTNVCAFFPPQPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG-- 161 (332)
Q Consensus 85 ~~~i~Hp~~~~~~~~~~~~n~~~~~h~~PNv~v~~~G~ICL~iL~~~~e~WsP~~ti~sVL~sI~~lL~~-nP~~~~~-- 161 (332)
+||| |||+ +.+|+|||++|+ ++++|+|+++|++||++|++||.+ ||+++++
T Consensus 94 --~i~H----------------------PNI~-~~~G~ICL~iL~-~~~~WsP~~ti~~vL~sI~sll~~Pn~~~Pln~e 147 (169)
T 1yrv_A 94 --IPFH----------------------PNVD-PHTGQPCIDFLD-NPEKWNTNYTLSSILLALQVMLSNPVLENPVNLE 147 (169)
T ss_dssp --CCCC----------------------TTBC-TTTCCBCCHHHH-CGGGCCTTCCHHHHHHHHHHHHTSCCTTSCSCHH
T ss_pred --CCcc----------------------Cccc-CCCCeEeehhhc-CCcCCCCcCCHHHHHHHHHHHHhCCCCCCchhHH
Confidence 8888 9942 789999999996 237899999999999999999965 6666655
Q ss_pred hhHhhHHhHHHHHHHHHHHHhh
Q 020053 162 SLDYKKEERRALAIKSREAAPK 183 (332)
Q Consensus 162 a~~~~~~dr~~y~~kare~~~k 183 (332)
|++++++|++.|.++ |+++++
T Consensus 148 aa~l~~~d~~~y~~~-~~~v~~ 168 (169)
T 1yrv_A 148 AARILVKDESLYRTI-LRLFNR 168 (169)
T ss_dssp HHHHHHSCHHHHHHH-HHHHC-
T ss_pred HHHHHHHCHHHHHHH-HHHhhC
Confidence 677888999999988 887754
No 29
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=100.00 E-value=7.5e-38 Score=286.97 Aligned_cols=146 Identities=27% Similarity=0.521 Sum_probs=133.8
Q ss_pred HHHHHHHHHHHHHhhCCCCCeEEecCCC-CceEEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccccccccccccc
Q 020053 11 PAVKRILQEVKEMQSNPSDDFMSLPLEE-NIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTVRCCSLME 89 (332)
Q Consensus 11 ~a~kRL~kEl~~l~~~p~~gi~v~p~ed-nl~~W~v~I~GP~dTpYeGGiF~l~I~fP~~YP~~PP~V~FlT~~~~~~i~ 89 (332)
.+.+||++|+++|++++++||++.|.++ ++++|+++|.||++|||+||+|+++|.||++||++||+|+|.| +||
T Consensus 2 ~a~~RL~kEl~~l~~~~~~gi~~~p~~~~~l~~w~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T-----~i~ 76 (215)
T 1tte_A 2 SRAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDT-----KVY 76 (215)
T ss_dssp TTHHHHHHHHHHHHTTTCTTCEECCCSSSSCCEEEEECCEEEEETTEEECCEEEEECCSCSSSCCCEEEETT-----TCC
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCCEEEEEEeCCccCCCCCCcccccC-----CCc
Confidence 3789999999999999999999999876 5669999999999999999999999999999999999999999 888
Q ss_pred ccccccccCCceeecccccCCCCCCccccC-CCeEEeecCCCCCCCCCCCCCHHHHHHHHHHhCCC-CCCChhh--hhHh
Q 020053 90 HKSYCLCADYGVRTNVCAFFPPQPNGRFET-QTKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDY 165 (332)
Q Consensus 90 Hp~~~~~~~~~~~~n~~~~~h~~PNv~v~~-~G~ICL~iL~~~~e~WsP~~ti~sVL~sI~~lL~~-nP~~~~~--a~~~ 165 (332)
| || |+. +|.|||++|+ +.|+|+++|++||++|++||.+ ||+++++ ++.+
T Consensus 77 H----------------------PN--I~~~~G~ICL~iL~---~~WsP~~ti~~VL~sI~sLL~~Pnp~~Pln~eaa~~ 129 (215)
T 1tte_A 77 H----------------------PN--ISSVTGAICLDILR---NAWSPVITLKSALISLQALLQSPEPNDPQDAEVAQH 129 (215)
T ss_dssp C----------------------SS--SCSSSSCCCSSTTT---CCSCTTCCHHHHHHHHHHHHTSCCCSSCSCHHHHHH
T ss_pred c----------------------Cc--CcCCCCEEECccCC---CCCCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHH
Confidence 8 99 566 9999999998 8999999999999999999965 6776655 5677
Q ss_pred hHHhHHHHHHHHHHHHhhhCChh
Q 020053 166 KKEERRALAIKSREAAPKFGTPE 188 (332)
Q Consensus 166 ~~~dr~~y~~kare~~~kya~~~ 188 (332)
+++|++.|.++||+|+++|+...
T Consensus 130 ~~~d~~~f~~~ar~~t~~yA~~~ 152 (215)
T 1tte_A 130 YLRDRESFNKTAALWTRLYASET 152 (215)
T ss_dssp HHHCHHHHHHHHHHHHHHSSCCC
T ss_pred HHHCHHHHHHHHHHHHHHhccCC
Confidence 88999999999999999999754
No 30
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=100.00 E-value=5.2e-37 Score=274.34 Aligned_cols=147 Identities=30% Similarity=0.585 Sum_probs=130.3
Q ss_pred hHHHHHHHHHHHHHhhCCCCCeEEe-cCCCCceEEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCccccccccccccc
Q 020053 10 NPAVKRILQEVKEMQSNPSDDFMSL-PLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTVRCCSLM 88 (332)
Q Consensus 10 ~~a~kRL~kEl~~l~~~p~~gi~v~-p~ednl~~W~v~I~GP~dTpYeGGiF~l~I~fP~~YP~~PP~V~FlT~~~~~~i 88 (332)
+.+.|||++||++|+++++.||++. +.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|+| +|
T Consensus 6 ~~a~kRL~kEl~~l~~~~~~gi~~~~~~~~nl~~W~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t-----~i 80 (183)
T 3rz3_A 6 PSSQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLT-----KM 80 (183)
T ss_dssp CHHHHHHHHHHHHHHHSCCTTEEEEECTTCCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESS-----CC
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEecCccchhheeeeeeCCCCCCCCCCeEEEEEECCCCCCCCCCeeEecC-----CC
Confidence 5799999999999999999999998 67889999999999999999999999999999999999999999999 88
Q ss_pred cccccccccCCceeecccccCCCCCCccccCCCeEEeecCCCC----------CCCCCCCCCHHHHHHHHHHhCCC-CCC
Q 020053 89 EHKSYCLCADYGVRTNVCAFFPPQPNGRFETQTKICLSISNHH----------PEHWQPSWSVRTALVALIAFMPT-NPN 157 (332)
Q Consensus 89 ~Hp~~~~~~~~~~~~n~~~~~h~~PNv~v~~~G~ICL~iL~~~----------~e~WsP~~ti~sVL~sI~~lL~~-nP~ 157 (332)
|| || |+.+|+|||++|..+ .++|+|+++|++||++|++||.+ ||+
T Consensus 81 ~H----------------------Pn--V~~~G~iClsiL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~Pn~~ 136 (183)
T 3rz3_A 81 WH----------------------PN--IYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTF 136 (183)
T ss_dssp CC----------------------TT--BCTTSBBCCTTC--------------CCCCTTCCHHHHHHHHHHHHHSCCCS
T ss_pred cc----------------------CC--CCCCCcEehhhcCcccccccccccccCCCCCcCcHHHHHHHHHHHHhCCCCC
Confidence 88 99 678999999999621 27899999999999999999965 666
Q ss_pred Chhh--hhHhhHH------hHHHHHHHHHHHHhhhC
Q 020053 158 GALG--SLDYKKE------ERRALAIKSREAAPKFG 185 (332)
Q Consensus 158 ~~~~--a~~~~~~------dr~~y~~kare~~~kya 185 (332)
++++ |+.++++ ++++|.+++|+++.++.
T Consensus 137 ~p~n~~aa~~~~~~~~~~~~~~~y~~~v~~~v~~s~ 172 (183)
T 3rz3_A 137 SPANVDASVMYRKWKESKGKDREYTDIIRKQVLGTK 172 (183)
T ss_dssp SCSSHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHH
T ss_pred CcccHHHHHHHHhcccccccHHHHHHHHHHHHHHHH
Confidence 6655 5666666 67899999999998864
No 31
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=100.00 E-value=4.1e-37 Score=272.78 Aligned_cols=144 Identities=25% Similarity=0.602 Sum_probs=108.9
Q ss_pred CChHHHHHHHHHHHHHhhCCCCCeEEecCC-CCceEEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCccccccccccc
Q 020053 8 LKNPAVKRILQEVKEMQSNPSDDFMSLPLE-ENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTVRCCS 86 (332)
Q Consensus 8 m~~~a~kRL~kEl~~l~~~p~~gi~v~p~e-dnl~~W~v~I~GP~dTpYeGGiF~l~I~fP~~YP~~PP~V~FlT~~~~~ 86 (332)
-++.+.+||++||++|+++++.||++.|.+ +|+++|+++|.||++||||||+|+|+|.||++||++||+|+|+|
T Consensus 14 ~~~~~~~rL~kEl~~l~~~~~~gi~~~p~~~~nl~~W~~~I~GP~~TpYegG~f~~~i~fp~~YP~~PP~v~F~T----- 88 (172)
T 2awf_A 14 LVPRGSLLLRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFIT----- 88 (172)
T ss_dssp CCCTTHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECS-----
T ss_pred ChHHHHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCcEEEEEEECCcccCCCCCcccccC-----
Confidence 356689999999999999999999999875 79999999999999999999999999999999999999999999
Q ss_pred cccccccccccCCceeecccccCCCCCCccccCCCeEEeecCCC----------CCCCCCCCCCHHHHHHHHHHhCCC-C
Q 020053 87 LMEHKSYCLCADYGVRTNVCAFFPPQPNGRFETQTKICLSISNH----------HPEHWQPSWSVRTALVALIAFMPT-N 155 (332)
Q Consensus 87 ~i~Hp~~~~~~~~~~~~n~~~~~h~~PNv~v~~~G~ICL~iL~~----------~~e~WsP~~ti~sVL~sI~~lL~~-n 155 (332)
+||| || |+.+|+|||++|+. +.+.|+|+++|++||++|++||.+ |
T Consensus 89 ~i~H----------------------PN--V~~~G~IClsiL~~~~~d~~~~~~~~~~WsP~~ti~~vL~sI~sll~~Pn 144 (172)
T 2awf_A 89 EIWH----------------------PN--VDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPN 144 (172)
T ss_dssp CCCC----------------------TT--BCTTCBBCCGGGSCC---------CTTSCCTTCCHHHHHHHHHHHHSCC-
T ss_pred CCcc----------------------CC--CCCCCcEehhhcCCcccccccccccCCCCCCcCcHHHHHHHHHHHHHCcC
Confidence 8888 99 67899999999973 136899999999999999999964 5
Q ss_pred CCChhh--hhHhhHHhHH-HHHHHHHHH
Q 020053 156 PNGALG--SLDYKKEERR-ALAIKSREA 180 (332)
Q Consensus 156 P~~~~~--a~~~~~~dr~-~y~~kare~ 180 (332)
|+++++ |+.++++|++ +|.++||++
T Consensus 145 ~~~p~n~~aa~~~~~d~~~~f~~~vr~~ 172 (172)
T 2awf_A 145 GDSPANVDAAKEWREDRNGEFKRKVARC 172 (172)
T ss_dssp ----------------------------
T ss_pred CCCccCHHHHHHHHHCcHHHHHHHHHhC
Confidence 566655 6778889999 999999874
No 32
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=100.00 E-value=1e-37 Score=271.53 Aligned_cols=144 Identities=21% Similarity=0.470 Sum_probs=129.3
Q ss_pred HHHHHHHHHHHHHhhCCCCCeEEecCCCCceEEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCccccccccccccccc
Q 020053 11 PAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTVRCCSLMEH 90 (332)
Q Consensus 11 ~a~kRL~kEl~~l~~~p~~gi~v~p~ednl~~W~v~I~GP~dTpYeGGiF~l~I~fP~~YP~~PP~V~FlT~~~~~~i~H 90 (332)
.+.+||++|+++|+++ |+.+.+.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|+| +|||
T Consensus 2 sa~~Rl~kEl~~l~~~---~~~v~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t-----~i~H 73 (152)
T 2onu_A 2 TSLTRKQCDFTKLIMA---GYDLELNNGSTQDFDVMFHGPNGTAYEGGIWKVHVTLPDDYPFASPSIGFMN-----KLLH 73 (152)
T ss_dssp -CCCHHHHTHHHHHHH---TCCEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESS-----CCCC
T ss_pred hHHHHHHHHHHhcCcC---CCEEEEccCccceEEEEEECCCCCcccceEEEEEEcCcccCCCCCCeEEEec-----CCcc
Confidence 3568999999999874 7888899999999999999999999999999999999999999999999999 8888
Q ss_pred cccccccCCceeecccccCCCCCCcccc-CCCeEEeecCCCCCCCCCCCCCHHHHHHH-HHHhCCC-CCCChhh--hhHh
Q 020053 91 KSYCLCADYGVRTNVCAFFPPQPNGRFE-TQTKICLSISNHHPEHWQPSWSVRTALVA-LIAFMPT-NPNGALG--SLDY 165 (332)
Q Consensus 91 p~~~~~~~~~~~~n~~~~~h~~PNv~v~-~~G~ICL~iL~~~~e~WsP~~ti~sVL~s-I~~lL~~-nP~~~~~--a~~~ 165 (332)
|| |+ .+|.|||++|+ ++|+|+++|++||++ |++||.+ ||+++++ ++.+
T Consensus 74 ----------------------Pn--i~~~~G~iCl~il~---~~W~p~~~i~~vl~~ii~~Ll~~Pn~~~P~n~~aa~~ 126 (152)
T 2onu_A 74 ----------------------PN--VDEASGSVCLDVIN---QTWTPLYSLVNVFEVFLPQLLTYPNPSDPLNSDAASL 126 (152)
T ss_dssp ----------------------TT--BCTTTCBBCHHHHH---HHCCTTCCHHHHHHTHHHHHHHSCCCSSCSSHHHHHH
T ss_pred ----------------------Cc--CcCcCCeEeccccc---ccCCCCCCHHHHHHHHHHHHHhCCCCCCcccHHHHHH
Confidence 99 56 58999999997 889999999999999 5788854 6666655 6777
Q ss_pred hHHhHHHHHHHHHHHHhhhCChhH
Q 020053 166 KKEERRALAIKSREAAPKFGTPER 189 (332)
Q Consensus 166 ~~~dr~~y~~kare~~~kya~~~~ 189 (332)
+++|++.|.+++|+|+++||..+.
T Consensus 127 ~~~d~~~y~~~v~~~~~~~a~~~~ 150 (152)
T 2onu_A 127 LMKDKNIYEEKVKEYVKLYASKDL 150 (152)
T ss_dssp HHHCHHHHHHHHHHHHHHHSCGGG
T ss_pred HHHCHHHHHHHHHHHHHHhccCcc
Confidence 889999999999999999998764
No 33
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=100.00 E-value=1.5e-36 Score=268.98 Aligned_cols=151 Identities=22% Similarity=0.381 Sum_probs=131.0
Q ss_pred CCChHHHHHHHHHHHHHhh-C-C------CC---CeEEec-CCCCceEEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCC
Q 020053 7 NLKNPAVKRILQEVKEMQS-N-P------SD---DFMSLP-LEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKP 74 (332)
Q Consensus 7 ~m~~~a~kRL~kEl~~l~~-~-p------~~---gi~v~p-~ednl~~W~v~I~GP~dTpYeGGiF~l~I~fP~~YP~~P 74 (332)
.|++.+.+||++||++|++ + + +. ++.+.| .++|+++|+++|.||++|||+||+|+|+|.||++||++|
T Consensus 2 ~Ms~~~~~RL~kEl~~l~~~~~~~~~~~~p~~g~~~~~~p~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~P 81 (172)
T 2y9m_A 2 AMADTCMSRIVKEYKVILKTLASDDPIANPYRGIIESLNPIDETDLSKWEAIISGPSDTPYENHQFRILIEVPSSYPMNP 81 (172)
T ss_dssp --CHHHHHHHHHHHHHHHHHHTCCCTTTCTTTTTEEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSC
T ss_pred CCcHHHHHHHHHHHHHHHhccCCcccccCCCCcceEEEecCCCCchhEEEEEEECCCCCcccCCEEEEEEECCCcCCCCC
Confidence 4888999999999999998 5 3 33 466778 788999999999999999999999999999999999999
Q ss_pred CccccccccccccccccccccccCCceeecccccCCCCCCccccCCCeEEeecCCCCCCCCCCCCCHHHHHHHHHHhCCC
Q 020053 75 PSFMLLTVRCCSLMEHKSYCLCADYGVRTNVCAFFPPQPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPT 154 (332)
Q Consensus 75 P~V~FlT~~~~~~i~Hp~~~~~~~~~~~~n~~~~~h~~PNv~v~~~G~ICL~iL~~~~e~WsP~~ti~sVL~sI~~lL~~ 154 (332)
|+|+|.|. +||| |||+ +.+|+|||++|+ +++|+|+++|++||++|++||.+
T Consensus 82 P~v~f~t~----~i~H----------------------Pni~-~~~G~iCl~iL~--~~~W~p~~~i~~vL~si~~ll~~ 132 (172)
T 2y9m_A 82 PKISFMQN----NILH----------------------CNVK-SATGEICLNILK--PEEWTPVWDLLHCVHAVWRLLRE 132 (172)
T ss_dssp CEEEECTT----SCCC----------------------TTEE-TTTTEECCGGGS--TTTCCTTCCHHHHHHHHHHHHHS
T ss_pred CEEEEeeC----Ceec----------------------CCCc-CCCCEEeccccC--CCCCCCcCcHHHHHHHHHHHHhC
Confidence 99999983 6788 9953 578999999996 47899999999999999999964
Q ss_pred -CCCChhh--hhHhhHH-hHHHHHHHHHHHHhhhCC
Q 020053 155 -NPNGALG--SLDYKKE-ERRALAIKSREAAPKFGT 186 (332)
Q Consensus 155 -nP~~~~~--a~~~~~~-dr~~y~~kare~~~kya~ 186 (332)
+|+++++ ++.++++ |++.|.++||+|++++..
T Consensus 133 p~~~~p~n~~aa~~~~~~d~~~f~~~~~~~~~~~~~ 168 (172)
T 2y9m_A 133 PVCDSPLDVDIGNIIRCGDMSAYQGIVKYFLAERER 168 (172)
T ss_dssp CCTTSCSSHHHHHHHTTTCHHHHHHHHHHHHHHHHC
T ss_pred CCCCCccCHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 6666655 5677778 999999999999998753
No 34
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=100.00 E-value=2.9e-37 Score=268.39 Aligned_cols=145 Identities=28% Similarity=0.606 Sum_probs=127.9
Q ss_pred HHHHHHHHHHHHhhCCCCCeEEec-CCCCceEEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCccccccccccccccc
Q 020053 12 AVKRILQEVKEMQSNPSDDFMSLP-LEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTVRCCSLMEH 90 (332)
Q Consensus 12 a~kRL~kEl~~l~~~p~~gi~v~p-~ednl~~W~v~I~GP~dTpYeGGiF~l~I~fP~~YP~~PP~V~FlT~~~~~~i~H 90 (332)
+.+||++|+++|+++++.|+.+.+ .++|+++|+++|. |++|||+||+|+++|.||++||++||+|+|.| +|||
T Consensus 3 a~~RL~kEl~~l~~~~~~~~~~~~~~~~~l~~w~~~i~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t-----~i~H 76 (154)
T 1c4z_D 3 ASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKT-----KIYH 76 (154)
T ss_dssp -CTTHHHHHTTCSSSCCSSCEEECSSCSSSSEEEEEEC-CCSSSCCSCCEEEEEECCTTTTTSCCEEEESS-----CCCC
T ss_pred HHHHHHHHHHHHHhCCCCCEEEeeCCCCchheEEEEEe-CCCCCccCCeEEEEEEeCCCCCCCCCEEEEeC-----CCcc
Confidence 678999999999999999998654 6789999999998 99999999999999999999999999999999 8888
Q ss_pred cccccccCCceeecccccCCCCCCccccCCCeEEeecCCCCCCCCCCCCCHHHHHHHHHHhCCC-CCCChhh--hhHhhH
Q 020053 91 KSYCLCADYGVRTNVCAFFPPQPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKK 167 (332)
Q Consensus 91 p~~~~~~~~~~~~n~~~~~h~~PNv~v~~~G~ICL~iL~~~~e~WsP~~ti~sVL~sI~~lL~~-nP~~~~~--a~~~~~ 167 (332)
|| |+.+|+|||++|+ +++|+|+++|++||++|++||.+ +|+++++ ++.+++
T Consensus 77 ----------------------Pn--v~~~G~iCl~iL~--~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~ 130 (154)
T 1c4z_D 77 ----------------------PN--IDEKGQVCLPVIS--AENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYS 130 (154)
T ss_dssp ----------------------TT--BCTTCBBCCTTTS--SSSCCTTCCHHHHHHHHHHHHHSCCCSSCSCHHHHHHHH
T ss_pred ----------------------cc--CCCCCEEECCCCC--CCCCCCCCcHHHHHHHHHHHHcCCCCCchhhHHHHHHHH
Confidence 99 6789999999995 37899999999999999999954 6666655 567778
Q ss_pred HhHHHHHHHHHHHHhhhCChh
Q 020053 168 EERRALAIKSREAAPKFGTPE 188 (332)
Q Consensus 168 ~dr~~y~~kare~~~kya~~~ 188 (332)
+|++.|.++||+|+++||...
T Consensus 131 ~~~~~f~~~~~~~~~~~a~~~ 151 (154)
T 1c4z_D 131 KDRKKFCKNAEEFTKKYGEKR 151 (154)
T ss_dssp TCSSTTHHHHHHHHTTC----
T ss_pred HhHHHHHHHHHHHHHHhcccC
Confidence 999999999999999999754
No 35
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=100.00 E-value=5.4e-37 Score=274.28 Aligned_cols=147 Identities=24% Similarity=0.495 Sum_probs=129.5
Q ss_pred CCCh--HHHHHHHHHHHHHhhCCCCCeEEecCCCCceEEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCccccccccc
Q 020053 7 NLKN--PAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTVRC 84 (332)
Q Consensus 7 ~m~~--~a~kRL~kEl~~l~~~p~~gi~v~p~ednl~~W~v~I~GP~dTpYeGGiF~l~I~fP~~YP~~PP~V~FlT~~~ 84 (332)
.|++ .+.+||++||++|+. .|+.+.+. +|+++|+++|.||++|||+||+|+++|.||++||++||+|+|+|
T Consensus 19 ~ms~~~~a~~RL~kEl~~l~~---~g~~v~~~-ddl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~V~F~t--- 91 (179)
T 2z5d_A 19 SMSSPSPGKRRMDTDVIKLIE---SKHEVTIL-GGLNEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMN--- 91 (179)
T ss_dssp ----CCHHHHHHHHHHHHHHH---SSSCEEEE-EETTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESS---
T ss_pred cCCCchHHHHHHHHHHHhcCc---CCCEEEEC-CCCceeEEEEECCCCCCccCCEEEEEeeCCCCCCCCCceEEEec---
Confidence 4544 589999999999985 47888877 67999999999999999999999999999999999999999999
Q ss_pred cccccccccccccCCceeecccccCCCCCCccccC-CCeEEeecCCCCCCCCCCCCCHHHHHHH-HHHhCCC-CCCChhh
Q 020053 85 CSLMEHKSYCLCADYGVRTNVCAFFPPQPNGRFET-QTKICLSISNHHPEHWQPSWSVRTALVA-LIAFMPT-NPNGALG 161 (332)
Q Consensus 85 ~~~i~Hp~~~~~~~~~~~~n~~~~~h~~PNv~v~~-~G~ICL~iL~~~~e~WsP~~ti~sVL~s-I~~lL~~-nP~~~~~ 161 (332)
+||| || |+. +|.|||++|+ ++|+|+++|++||++ |++||.+ ||+++++
T Consensus 92 --~i~H----------------------PN--V~~~~G~ICL~iL~---~~WsP~~ti~~iL~s~I~~Ll~~Pn~~~p~n 142 (179)
T 2z5d_A 92 --KIFH----------------------PN--IDEASGTVCLDVIN---QTWTALYDLTNIFESFLPQLLAYPNPIDPLN 142 (179)
T ss_dssp --CCCB----------------------TT--BCTTTCBBCHHHHH---HHCCTTCCTTHHHHTHHHHHHHSCCCSSCSC
T ss_pred --CCcc----------------------Cc--CCCCCCeEeccccc---cCCCCCCCHHHHHHHHHHHHHhCCCCCCccC
Confidence 8888 99 566 9999999997 899999999999999 9999854 6666654
Q ss_pred --hhHhhHHhHHHHHHHHHHHHhhhCChhH
Q 020053 162 --SLDYKKEERRALAIKSREAAPKFGTPER 189 (332)
Q Consensus 162 --a~~~~~~dr~~y~~kare~~~kya~~~~ 189 (332)
++.++++|+++|.++||+|+++|+..+.
T Consensus 143 ~eaa~~~~~d~~~y~~~vr~~~~~~a~~~~ 172 (179)
T 2z5d_A 143 GDAAAMYLHRPEEYKQKIKEYIQKYATEEA 172 (179)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHSSHHH
T ss_pred HHHHHHHHHCHHHHHHHHHHHHHHHcccch
Confidence 5778889999999999999999998654
No 36
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=4.4e-36 Score=263.22 Aligned_cols=139 Identities=20% Similarity=0.441 Sum_probs=126.8
Q ss_pred hHHHHHHHHHHHHHhhCCCCCeEEe-cCCCCceEEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCccccccccccccc
Q 020053 10 NPAVKRILQEVKEMQSNPSDDFMSL-PLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTVRCCSLM 88 (332)
Q Consensus 10 ~~a~kRL~kEl~~l~~~p~~gi~v~-p~ednl~~W~v~I~GP~dTpYeGGiF~l~I~fP~~YP~~PP~V~FlT~~~~~~i 88 (332)
+.+.+||++|+++| ++++|+++. |.++|+++|+++| ||++|||+||+|+++|.||++||++||+|+|.| +|
T Consensus 5 ~~~~~RL~kEl~~l--~~~~~~~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t-----~i 76 (160)
T 1y8x_A 5 SAAQLRIQKDINEL--NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCET-----MV 76 (160)
T ss_dssp CHHHHHHHHHHHTC--CCCTTEEEECSSTTCTTEEEEEE-CCSSSTTTTBCEEEEEECCTTTTTSCCEEEECS-----CC
T ss_pred cHHHHHHHHHHHhc--CCCCCeEEEeccCCccceEEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCEEEEec-----CC
Confidence 56999999999999 577899987 8899999999998 999999999999999999999999999999999 88
Q ss_pred cccccccccCCceeecccccCCCCCCccccCCCeEEeecCCCCCCCCCCCCCHHHHHHHHHHhCCC-CCCChhh--hhHh
Q 020053 89 EHKSYCLCADYGVRTNVCAFFPPQPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDY 165 (332)
Q Consensus 89 ~Hp~~~~~~~~~~~~n~~~~~h~~PNv~v~~~G~ICL~iL~~~~e~WsP~~ti~sVL~sI~~lL~~-nP~~~~~--a~~~ 165 (332)
|| || |+.+|.|||++|+ ++|+|+++|++||++|++||.+ ||+++++ ++.+
T Consensus 77 ~H----------------------Pn--v~~~G~iCl~iL~---~~W~p~~~i~~vL~~i~~ll~~Pn~~~p~n~~aa~~ 129 (160)
T 1y8x_A 77 YH----------------------PN--IDLEGNVCLNILR---EDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEV 129 (160)
T ss_dssp CB----------------------TT--BCTTCBBCCGGGT---TTCCTTCCHHHHHHHHHHHHHSCCCSSCSCHHHHHH
T ss_pred cc----------------------Cc--CCCCCeEEcccch---hhccCCCCHHHHHHHHHHHHhCCCCCCccCHHHHHH
Confidence 88 99 6788999999998 8999999999999999999965 6666654 5777
Q ss_pred hHHhHHHHHHHHHHHHhh
Q 020053 166 KKEERRALAIKSREAAPK 183 (332)
Q Consensus 166 ~~~dr~~y~~kare~~~k 183 (332)
+++|++.|.++||++++.
T Consensus 130 ~~~~~~~f~~~v~~~v~~ 147 (160)
T 1y8x_A 130 LQNNRRLFEQNVQRSMRG 147 (160)
T ss_dssp HHSCHHHHHHHHHHHHHS
T ss_pred HHHCHHHHHHHHHHHHhh
Confidence 889999999999999874
No 37
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=8.6e-36 Score=266.29 Aligned_cols=143 Identities=19% Similarity=0.394 Sum_probs=129.6
Q ss_pred CCCChHHHHHHHHHHHHHhhCCCCCeEEe-cCCCCceEEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCccccccccc
Q 020053 6 YNLKNPAVKRILQEVKEMQSNPSDDFMSL-PLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTVRC 84 (332)
Q Consensus 6 ~~m~~~a~kRL~kEl~~l~~~p~~gi~v~-p~ednl~~W~v~I~GP~dTpYeGGiF~l~I~fP~~YP~~PP~V~FlT~~~ 84 (332)
.+..+.+.+||++||++| ++++|+++. |.++|+++|+++| ||++|||+||+|+++|.||++||++||+|+|.|
T Consensus 21 ~~~~~~~~~RL~kEl~~l--~~~~~i~~~~p~~~nl~~W~~~i-gP~~tpYegg~f~~~i~fp~~YP~~PP~v~F~t--- 94 (180)
T 2nvu_C 21 SKKASAAQLRIQKDINEL--NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCET--- 94 (180)
T ss_dssp CCSCCHHHHHHHHHHHTC--CCCTTEEEECSSTTCTTEEEEEE-CCCSGGGTTBCEEEEEECCTTTTTSCCEEEECS---
T ss_pred cCCccHHHHHHHHHHHhc--CCCCCeEEEecccccccceEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCcCceec---
Confidence 345678999999999999 577899987 8899999999999 999999999999999999999999999999999
Q ss_pred cccccccccccccCCceeecccccCCCCCCccccCCCeEEeecCCCCCCCCCCCCCHHHHHHHHHHhCCC-CCCChhh--
Q 020053 85 CSLMEHKSYCLCADYGVRTNVCAFFPPQPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG-- 161 (332)
Q Consensus 85 ~~~i~Hp~~~~~~~~~~~~n~~~~~h~~PNv~v~~~G~ICL~iL~~~~e~WsP~~ti~sVL~sI~~lL~~-nP~~~~~-- 161 (332)
+||| || |+.+|.|||++|+ ++|+|+++|++||++|++||.+ ||+++++
T Consensus 95 --~i~H----------------------PN--V~~~G~iCl~iL~---~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~ 145 (180)
T 2nvu_C 95 --MVYH----------------------PN--IDLEGNVALNILR---EDWKPVLTINSIIYGLQYLFLEPNPEDPLNKE 145 (180)
T ss_dssp --CCCB----------------------TT--BCTTSBBCCGGGT---TSCCTTCCHHHHHHHHHHHHHSCCTTSCSSHH
T ss_pred --cCcc----------------------CC--CCCCCcEEccccc---ccCCCCCCHHHHHHHHHHHHhCCCCCCccCHH
Confidence 8888 99 6789999999998 8999999999999999999964 6666654
Q ss_pred hhHhhHHhHHHHHHHHHHHHhh
Q 020053 162 SLDYKKEERRALAIKSREAAPK 183 (332)
Q Consensus 162 a~~~~~~dr~~y~~kare~~~k 183 (332)
++.++++|++.|.++||++++.
T Consensus 146 aa~~~~~d~~~f~~~v~~~v~~ 167 (180)
T 2nvu_C 146 AAEVLQNNRRLFEQNVQRSMRG 167 (180)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHS
T ss_pred HHHHHHHCHHHHHHHHHHHHhh
Confidence 6777889999999999999875
No 38
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=100.00 E-value=6.4e-36 Score=252.11 Aligned_cols=119 Identities=26% Similarity=0.503 Sum_probs=104.2
Q ss_pred cCCCChHHHHHHHHHHHHHhhCCCCCeEEecCCCCceEEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCccccccccc
Q 020053 5 RYNLKNPAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTVRC 84 (332)
Q Consensus 5 ~~~m~~~a~kRL~kEl~~l~~~p~~gi~v~p~ednl~~W~v~I~GP~dTpYeGGiF~l~I~fP~~YP~~PP~V~FlT~~~ 84 (332)
+|||+ .+.+||++|+++|+++++.|+.+.+.++|+++|+++|.||++||||||+|+++|.||++||++||+|+|.|
T Consensus 1 ~~~m~-~a~~RL~kEl~~l~~~~~~~~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t--- 76 (125)
T 2fo3_A 1 KYNMG-NANYRIQKELHNFLNNPPINCTLDVHPNNIRIWIVKYVGLENTIYANEVYKLKIIFPDDYPLKPPIVYFLQ--- 76 (125)
T ss_dssp ---------CHHHHHHHHHHHSCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECS---
T ss_pred CCCch-HHHHHHHHHHHHHHhCCCCCEEEEeCcchhhhhheEEeCCCCCCcCCCEEEEEEEcCCCCCCCCCEEEEeC---
Confidence 58996 48899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccc-cccccccccCCceeecccccCCCCCCccccCCCeEEeecCCCCCCCCCCCCCHHHHHHHHHHhCCCCCC
Q 020053 85 CSLM-EHKSYCLCADYGVRTNVCAFFPPQPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPN 157 (332)
Q Consensus 85 ~~~i-~Hp~~~~~~~~~~~~n~~~~~h~~PNv~v~~~G~ICL~iL~~~~e~WsP~~ti~sVL~sI~~lL~~nP~ 157 (332)
++ || || |+.+|+|||++|+ ++|+|+++|++||++|++||. +|+
T Consensus 77 --~i~~H----------------------Pn--v~~~G~iCl~iL~---~~W~P~~~i~~vl~si~~ll~-~p~ 120 (125)
T 2fo3_A 77 --KPPKH----------------------TH--VYSNGDICLSLLG---DDYNPSLSISGLVLSIISMLS-SAK 120 (125)
T ss_dssp --SCCCB----------------------TT--BCTTSBBCCGGGT---TTCCTTCCHHHHHHHHHHHHC----
T ss_pred --CCCCC----------------------Cc--CCCCCEEEchhcC---CCCCCCCcHHHHHHHHHHHHh-Ccc
Confidence 76 88 99 6789999999997 899999999999999999994 443
No 39
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=100.00 E-value=1.2e-35 Score=293.34 Aligned_cols=147 Identities=29% Similarity=0.615 Sum_probs=137.9
Q ss_pred hHHHHHHHHHHHHHhhCCCCCeEEecCCCCceEEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccccccccccccc
Q 020053 10 NPAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTVRCCSLME 89 (332)
Q Consensus 10 ~~a~kRL~kEl~~l~~~p~~gi~v~p~ednl~~W~v~I~GP~dTpYeGGiF~l~I~fP~~YP~~PP~V~FlT~~~~~~i~ 89 (332)
+.|.|||++|+++|++++++|+++.|.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.| +||
T Consensus 2 s~a~~RL~kEl~~l~~~~~~~~~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t-----~i~ 76 (399)
T 4ddg_A 2 AMALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTT-----RIY 76 (399)
T ss_dssp HHHHHHHHHHHHHHHHSCCSSEEEEEETTEEEEEEEEEECCTTSSSTTCEEEEEEECCSSTTTSCCEEEESS-----CCC
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEEcCCcceEEEEEEECCCCCCCCCCEEEEEEECCcccCCCCcEEEeec-----ccc
Confidence 568999999999999999999999999999999999999999999999999999999999999999999999 888
Q ss_pred ccccccccCCceeecccccCCCCCCccccCCCeEEeecCCCCCCCCCCCCCHHHHHHHHHHhCCC-CCCChhh--hhHhh
Q 020053 90 HKSYCLCADYGVRTNVCAFFPPQPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYK 166 (332)
Q Consensus 90 Hp~~~~~~~~~~~~n~~~~~h~~PNv~v~~~G~ICL~iL~~~~e~WsP~~ti~sVL~sI~~lL~~-nP~~~~~--a~~~~ 166 (332)
| || |+.+|.|||++|. ++|+|+++|++||++|++||.+ ||+++++ ++.++
T Consensus 77 H----------------------Pn--v~~~G~iCl~il~---~~W~p~~~i~~vL~~i~~ll~~pnp~~p~n~~aa~~~ 129 (399)
T 4ddg_A 77 H----------------------PN--INSNGSISLDILR---SQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIY 129 (399)
T ss_dssp C----------------------TT--BCTTCBBCCGGGT---TSCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHH
T ss_pred c----------------------cc--cCCCCeEeCcccc---cCCCccccHHHHHHHHHHHHcCCCCCchhhHHHHHHH
Confidence 8 99 6789999999997 8999999999999999999965 7777765 57788
Q ss_pred HHhHHHHHHHHHHHHhhhCChh
Q 020053 167 KEERRALAIKSREAAPKFGTPE 188 (332)
Q Consensus 167 ~~dr~~y~~kare~~~kya~~~ 188 (332)
++|+++|.++||+|+++|+...
T Consensus 130 ~~d~~~y~~~~~~~~~~~a~~~ 151 (399)
T 4ddg_A 130 KTDREKYNRIAREWTQKYAMGG 151 (399)
T ss_dssp HHCHHHHHHHHHHHHHHHTSCT
T ss_pred HHCHHHHHHHHHHHHHHhhccc
Confidence 9999999999999999999764
No 40
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=100.00 E-value=2.8e-36 Score=267.43 Aligned_cols=143 Identities=22% Similarity=0.479 Sum_probs=127.0
Q ss_pred HHHHHHHHHHHHHhhCCCCCeEEecCCCCceEEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCccccccccccccccc
Q 020053 11 PAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTVRCCSLMEH 90 (332)
Q Consensus 11 ~a~kRL~kEl~~l~~~p~~gi~v~p~ednl~~W~v~I~GP~dTpYeGGiF~l~I~fP~~YP~~PP~V~FlT~~~~~~i~H 90 (332)
.+.+||++|+++|++++. ++ +.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.| +|||
T Consensus 12 ~~~~RL~~El~~l~~~~~-~v---~~~~~l~~w~~~I~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~F~t-----~i~H 82 (171)
T 1yf9_A 12 RSNRRREMDYMRLCNSTR-KV---YPSDTVAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFCN-----RILH 82 (171)
T ss_dssp -CCHHHHHHHHHHHSSSS-CE---EECSSTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESS-----CCCB
T ss_pred cHHHHHHHHHHHHHhCCC-CC---CCCCCceEEEEEEECCCCCCccCceEEEEEEcCCCCCCCCCeEEeec-----Cccc
Confidence 578999999999999874 43 45889999999999999999999999999999999999999999999 8888
Q ss_pred cccccccCCceeecccccCCCCCCcccc-CCCeEEeecCCCCCCCCCCCCCHHHHHHHH-HHhCCC-CCCChhh--hhHh
Q 020053 91 KSYCLCADYGVRTNVCAFFPPQPNGRFE-TQTKICLSISNHHPEHWQPSWSVRTALVAL-IAFMPT-NPNGALG--SLDY 165 (332)
Q Consensus 91 p~~~~~~~~~~~~n~~~~~h~~PNv~v~-~~G~ICL~iL~~~~e~WsP~~ti~sVL~sI-~~lL~~-nP~~~~~--a~~~ 165 (332)
|| |+ .+|.|||++|+ ++|+|+++|++||++| ++||.+ ||+++++ ++.+
T Consensus 83 ----------------------PN--i~~~~G~iCl~iL~---~~W~p~~~i~~vL~sil~~ll~~Pn~~~p~n~~aa~~ 135 (171)
T 1yf9_A 83 ----------------------PN--VDERSGSVCLDVIN---QTWTPMYQLENIFDVFLPQLLRYPNPSDPLNVQAAHL 135 (171)
T ss_dssp ----------------------TT--BCTTTCBBCHHHHH---HHCCTTCCTHHHHHTHHHHHHHSCCSSCCSCHHHHHH
T ss_pred ----------------------cc--CcccCCeEeccccc---cCCCCCCcHHHHHHHHHHHHHhCCCCCCcccHHHHHH
Confidence 99 56 58999999997 8999999999999998 688854 5566654 5677
Q ss_pred hHHhHHHHHHHHHHHHhhhCChhH
Q 020053 166 KKEERRALAIKSREAAPKFGTPER 189 (332)
Q Consensus 166 ~~~dr~~y~~kare~~~kya~~~~ 189 (332)
+++|++.|.+++|+|+++|++...
T Consensus 136 ~~~d~~~y~~~vr~~~~~~a~~~~ 159 (171)
T 1yf9_A 136 LHADRVGFDALLREHVSTHATPQK 159 (171)
T ss_dssp HHHCHHHHHHHHHHHHHHHCCHHH
T ss_pred HHHCHHHHHHHHHHHHHHHcChhh
Confidence 889999999999999999998653
No 41
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=4.8e-35 Score=262.86 Aligned_cols=146 Identities=38% Similarity=0.769 Sum_probs=118.9
Q ss_pred CCChHHHHHHHHHHHHHhhCCCCCeEEecCCCCceEEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCccccccccccc
Q 020053 7 NLKNPAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTVRCCS 86 (332)
Q Consensus 7 ~m~~~a~kRL~kEl~~l~~~p~~gi~v~p~ednl~~W~v~I~GP~dTpYeGGiF~l~I~fP~~YP~~PP~V~FlT~~~~~ 86 (332)
+..+.+.+||++|+++|++++++||.+.|.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|+|
T Consensus 10 ~~~~~a~~RL~kEl~~l~~~~~~~i~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~v~f~T----- 84 (187)
T 2f4w_A 10 RAPTTATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMIT----- 84 (187)
T ss_dssp ----CHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECS-----
T ss_pred CCccHHHHHHHHHHHHHHhCCCCCEEEEEcCCccceeEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccccC-----
Confidence 456679999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccccCCceeecccccCCCCCCccccCCCeEEeecCCCCCCCCCCCCCHHHHHHHHHHhCCCCCCChhhhhHhh
Q 020053 87 LMEHKSYCLCADYGVRTNVCAFFPPQPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPNGALGSLDYK 166 (332)
Q Consensus 87 ~i~Hp~~~~~~~~~~~~n~~~~~h~~PNv~v~~~G~ICL~iL~~~~e~WsP~~ti~sVL~sI~~lL~~nP~~~~~a~~~~ 166 (332)
+ | || ++.+|+|||++|++|++.|+|+++|++||++|++||.+ |+...+++...
T Consensus 85 ~--~----------------------~~--~~~~G~ICL~iL~~~~~~W~P~~ti~~vL~si~sll~~-p~p~~g~~~~~ 137 (187)
T 2f4w_A 85 P--N----------------------GR--FKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVE-KGPTLGSIETS 137 (187)
T ss_dssp C--C----------------------SS--BCTTSCBC----------CCTTCCHHHHHHHHHHHHHS-CCCCTTBCCCC
T ss_pred C--C----------------------ce--eccCCeEeeeccccCccCCCCcCcHHHHHHHHHHHhcC-CCCCCcccccC
Confidence 4 5 66 67789999999977679999999999999999999943 44445555556
Q ss_pred HHhHHHHHHHHHHHHhhh
Q 020053 167 KEERRALAIKSREAAPKF 184 (332)
Q Consensus 167 ~~dr~~y~~kare~~~ky 184 (332)
..+|+.|++.+++|..+.
T Consensus 138 ~~~r~~~a~~s~~~~~~~ 155 (187)
T 2f4w_A 138 DFTKRQLAVQSLAFNLKD 155 (187)
T ss_dssp HHHHHHHHHHHHHHHHTC
T ss_pred hHHHHHHHHHHHHHhhcC
Confidence 688999999999998765
No 42
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=7.3e-35 Score=249.26 Aligned_cols=120 Identities=28% Similarity=0.514 Sum_probs=112.0
Q ss_pred ccCCCChHHHHHHHHHHHHHhhCCCCCeEEecCCCCceEEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccccccc
Q 020053 4 DRYNLKNPAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTVR 83 (332)
Q Consensus 4 ~~~~m~~~a~kRL~kEl~~l~~~p~~gi~v~p~ednl~~W~v~I~GP~dTpYeGGiF~l~I~fP~~YP~~PP~V~FlT~~ 83 (332)
.+++|+. +.+||++|+++|+++++.|+.+.+.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|
T Consensus 14 ~~~~~~~-~~~RL~kEl~~l~~~~~~~~~~~~~~~nl~~W~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t-- 90 (136)
T 2h2y_A 14 TKYNLGN-ANYRIQKELNNFLKNPPINCTIDVHPSNIRIWIVQYVGLENTIYANEVYKIKIIFPDNYPLKPPIVYFLQ-- 90 (136)
T ss_dssp SCCCTTS-HHHHHHHHHHHHHHSCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECS--
T ss_pred hhccchH-HHHHHHHHHHHHHhCCCCCeEEEeccccccccEEEEECCCCCceeCCEEEEEEEeCCCCCCCCCEEEEeC--
Confidence 4677765 8899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccc-cccccccccCCceeecccccCCCCCCccccCCCeEEeecCCCCCCCCCCCCCHHHHHHHHHHhCCCCCC
Q 020053 84 CCSLM-EHKSYCLCADYGVRTNVCAFFPPQPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPN 157 (332)
Q Consensus 84 ~~~~i-~Hp~~~~~~~~~~~~n~~~~~h~~PNv~v~~~G~ICL~iL~~~~e~WsP~~ti~sVL~sI~~lL~~nP~ 157 (332)
++ || || |+.+|+|||++|+ ++|+|+++|++||++|++|| .+|+
T Consensus 91 ---~i~~H----------------------Pn--v~~~G~ICl~iL~---~~WsP~~ti~~vL~si~sll-~~p~ 134 (136)
T 2h2y_A 91 ---KPPKH----------------------TH--VYSNGDICLSVLG---DDYNPSLSISGLILSIISML-SSAK 134 (136)
T ss_dssp ---SCCCC----------------------TT--BCTTCCBCCGGGT---TTCCTTCCHHHHHHHHHHHH-SSSC
T ss_pred ---CCCCC----------------------Cc--CCCCCEEECcccc---CCCCCCCcHHHHHHHHHHHH-hCcC
Confidence 75 88 99 6789999999997 89999999999999999999 4454
No 43
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=100.00 E-value=7.9e-35 Score=262.07 Aligned_cols=144 Identities=19% Similarity=0.366 Sum_probs=130.5
Q ss_pred CCChHHHHHHHHHHHHHhhCCCCCeEEe----cCCCCce---EEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccc
Q 020053 7 NLKNPAVKRILQEVKEMQSNPSDDFMSL----PLEENIF---EWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFML 79 (332)
Q Consensus 7 ~m~~~a~kRL~kEl~~l~~~p~~gi~v~----p~ednl~---~W~v~I~GP~dTpYeGGiF~l~I~fP~~YP~~PP~V~F 79 (332)
+..+.+.+||++||++|+ +++|+++. |.++|++ +|+++|. |++|||+||+|+++|.||++||++||+|+|
T Consensus 25 ~~~s~a~~RL~kEl~~l~--~~~~i~~~~~~~p~~~nl~~~~~w~~~I~-p~~tpyegg~f~~~i~fp~~YP~~PP~v~f 101 (190)
T 3o2u_A 25 PNLSAARIRLKRDLDSLD--LPPTVTLNVITSPDSADRSQSPKLEVIVR-PDEGYYNYGSINFNLDFNEVYPIEPPKVVC 101 (190)
T ss_dssp CCCCHHHHHHHHHHHTCC--CCTTEEEEEEECTTCCCTTSCCEEEEEEC-CSSSTTTTCCEEEEEECCTTTTTSCCEEEE
T ss_pred CCccHHHHHHHHHHHhcc--CCCCEEEEecCCCCCccCCcCCeEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCceeEE
Confidence 445679999999999998 67899887 8899999 9999997 788999999999999999999999999999
Q ss_pred ccccccccccccccccccCCceeecccccCCCCCCccccCCCeEEeecCCCCCCCCCCCCCHHHHHHHHHHhCCC-CCCC
Q 020053 80 LTVRCCSLMEHKSYCLCADYGVRTNVCAFFPPQPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNG 158 (332)
Q Consensus 80 lT~~~~~~i~Hp~~~~~~~~~~~~n~~~~~h~~PNv~v~~~G~ICL~iL~~~~e~WsP~~ti~sVL~sI~~lL~~-nP~~ 158 (332)
.| +||| || |+.+|.|||++|. ++|+|+++|++||++|++||.+ ||++
T Consensus 102 ~t-----~i~H----------------------Pn--V~~~G~iCl~iL~---~~W~p~~~i~~vL~~i~~ll~~pn~~~ 149 (190)
T 3o2u_A 102 LK-----KIFH----------------------PN--IDLKGNVCLNILR---EDWSPALDLQSIITGLLFLFLEPNPND 149 (190)
T ss_dssp CS-----CCCC----------------------TT--BCTTSBBCCGGGT---TTCCTTCCHHHHHHHHHHHHHSCCTTS
T ss_pred ec-----Cccc----------------------CC--CCCCCeEechhcc---CCCCCCCCHHHHHHHHHHHHhCCCCCc
Confidence 99 8888 99 6789999999998 8999999999999999999965 7777
Q ss_pred hhh--hhHhhHHhHHHHHHHHHHHHhhhC
Q 020053 159 ALG--SLDYKKEERRALAIKSREAAPKFG 185 (332)
Q Consensus 159 ~~~--a~~~~~~dr~~y~~kare~~~kya 185 (332)
+++ ++.++++|+++|.++||+|++++.
T Consensus 150 pln~~aa~~~~~d~~~f~~~ar~~~~~~~ 178 (190)
T 3o2u_A 150 PLNKDAAKLLCEGEKEFAEAVRLTMSGGS 178 (190)
T ss_dssp CSSHHHHHHHHTCHHHHHHHHHHHHBTCE
T ss_pred chhHHHHHHHHHCHHHHHHHHHHHHHhcC
Confidence 765 577888999999999999997653
No 44
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=100.00 E-value=7.5e-35 Score=256.61 Aligned_cols=141 Identities=19% Similarity=0.421 Sum_probs=124.8
Q ss_pred CCCChHHHHHHHHHHHHHhhCC------------CCCeEEecCCCCceEEEEEEeCCCCCCCC--CCEEEEEEEcCCCCC
Q 020053 6 YNLKNPAVKRILQEVKEMQSNP------------SDDFMSLPLEENIFEWQFAIRGPGDTEFE--GGIYHGRIQLPAEYP 71 (332)
Q Consensus 6 ~~m~~~a~kRL~kEl~~l~~~p------------~~gi~v~p~ednl~~W~v~I~GP~dTpYe--GGiF~l~I~fP~~YP 71 (332)
..|++.+.|||++|+++|++++ +.|+.+.+.++|+++|+++|.||++|||+ ||+|+++|.||++||
T Consensus 3 ~~Ms~~a~kRL~kEl~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpye~~gg~f~~~i~fp~~YP 82 (167)
T 4ds2_A 3 GSMKNISNKRIIKDLKLLLEEVDANNEANSSGSPHSTAIFSVDTDTIYNWILKVKAPADSVYGGAGNTYQLSVLFSDDYP 82 (167)
T ss_dssp --CCCCCCHHHHHHHHHHHHHHHHHTTC----CCSSCEEEEEEESSTTEEEEEEECCTTSGGGTTCCEEEEEEECCTTTT
T ss_pred ccccHHHHHHHHHHHHHHHhCcccccccccccCCCCcEEEEeCCCcccEEEEEEECCCCCCccCCCCEEEEEEECCCCCC
Confidence 4688889999999999999987 67899999999999999999999999999 999999999999999
Q ss_pred CCCCccccccccccccccccccccccCCceeecccccCCCCCCccccCCCeEEeecCCCCCCCCCCCCCHHHHHH-HHHH
Q 020053 72 FKPPSFMLLTVRCCSLMEHKSYCLCADYGVRTNVCAFFPPQPNGRFETQTKICLSISNHHPEHWQPSWSVRTALV-ALIA 150 (332)
Q Consensus 72 ~~PP~V~FlT~~~~~~i~Hp~~~~~~~~~~~~n~~~~~h~~PNv~v~~~G~ICL~iL~~~~e~WsP~~ti~sVL~-sI~~ 150 (332)
++||+|+|.| +||| || |+.+|.|||++|+ ++|+|+++++++|+ .|++
T Consensus 83 ~~pP~v~f~t-----~i~H----------------------Pn--v~~~G~iCl~il~---~~W~p~~~i~~vll~~l~~ 130 (167)
T 4ds2_A 83 HEPPTVRFVT-----PVYS----------------------PL--VTGEGGICDRMVN---DFWTPDQHASDVIKLVLDR 130 (167)
T ss_dssp TSCCEEEESS-----CCCC----------------------SS--CCTTSCCCTHHHH---TTCCTTSCHHHHHHHHHHH
T ss_pred CCCCEEEEeC-----Cccc----------------------cc--CCCCCEEEcccCc---CCCCCCCChHHHHHHHHHH
Confidence 9999999999 8888 99 6789999999997 89999999999765 4556
Q ss_pred hCCC---CCCChhh--hhHhhHHhHHHHHHHHH
Q 020053 151 FMPT---NPNGALG--SLDYKKEERRALAIKSR 178 (332)
Q Consensus 151 lL~~---nP~~~~~--a~~~~~~dr~~y~~kar 178 (332)
|+.. ||+++++ |+.++++|+++|.++||
T Consensus 131 l~~~~~pn~~~p~n~eaa~l~~~d~~~f~~~vr 163 (167)
T 4ds2_A 131 VFSQYKSRRDDDVNPEARHYLEKFPQDFAARVR 163 (167)
T ss_dssp HHTSTTSCCSCCCCHHHHHHHHHCHHHHHHHHT
T ss_pred HHhcCCCCCcchHhHHHHHHHHHCHHHHHHHHh
Confidence 6642 5566655 67888999999999997
No 45
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens}
Probab=100.00 E-value=1.6e-33 Score=271.75 Aligned_cols=159 Identities=25% Similarity=0.337 Sum_probs=135.6
Q ss_pred cCCCChHHHHHHHHHHHHHhhCCCCC----eEEecCCCCceEEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCccccc
Q 020053 5 RYNLKNPAVKRILQEVKEMQSNPSDD----FMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLL 80 (332)
Q Consensus 5 ~~~m~~~a~kRL~kEl~~l~~~p~~g----i~v~p~ednl~~W~v~I~GP~dTpYeGGiF~l~I~fP~~YP~~PP~V~Fl 80 (332)
..+|+..+.+||++|+++|++++++| +.+.+.++|++.|+++|.||++|||+||+|+|+|.||++||++||+|+|.
T Consensus 70 ~~~~s~~~~kRL~kEl~~L~k~~p~g~~~~i~v~~~ednl~~w~~~I~GP~~TpYegG~F~l~I~fP~dYP~~PP~V~F~ 149 (323)
T 3ceg_A 70 NDANSAARARRLAQEAVTLSTSLPLSSSSSVFVRCDEERLDIMKVLITGPADTPYANGCFEFDVYFPQDYPSSPPLVNLE 149 (323)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHCCCCSSCCEEEEEESSCTTEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHHHhCCCCCcccceeecccCCCccccEEEEeCCCCCCcCCCEEEEEEeCCCCCCCCCCeEEEe
Confidence 34688999999999999999988775 45677899999999999999999999999999999999999999999999
Q ss_pred cccccccccccccccccCCceeecccccCCCCCCccccCCCeEEeecCCCC----CCCCCCCC-CHHHHHHHHHHhCC-C
Q 020053 81 TVRCCSLMEHKSYCLCADYGVRTNVCAFFPPQPNGRFETQTKICLSISNHH----PEHWQPSW-SVRTALVALIAFMP-T 154 (332)
Q Consensus 81 T~~~~~~i~Hp~~~~~~~~~~~~n~~~~~h~~PNv~v~~~G~ICL~iL~~~----~e~WsP~~-ti~sVL~sI~~lL~-~ 154 (332)
|+-..+.||| || |+.+|+|||++|+.+ .+.|+|++ +|++||++|++||. .
T Consensus 150 T~~g~~~ifH----------------------PN--V~~~G~ICLsiL~~~~g~~~e~WsPa~stI~~VLlsIqsLL~~~ 205 (323)
T 3ceg_A 150 TTGGHSVRFN----------------------PN--LYNDGKVCLSILNTWHGRPEEKWNPQTSSFLQVLVSVQSLILVA 205 (323)
T ss_dssp CSTTTTCCCB----------------------TT--BCTTCBBCCGGGTSSCCCGGGSCCTTTCCHHHHHHHHHHHTSCS
T ss_pred ccCCCccccc----------------------CC--CCcCCeEechhhccccCCCcCCCCcCcCCHHHHHHHHHHHHcCC
Confidence 9211112777 99 678999999999733 26899999 89999999999995 3
Q ss_pred CC--CChhh----hhHhhHHhHHHHHHHHHHHHhhhCCh
Q 020053 155 NP--NGALG----SLDYKKEERRALAIKSREAAPKFGTP 187 (332)
Q Consensus 155 nP--~~~~~----a~~~~~~dr~~y~~kare~~~kya~~ 187 (332)
+| +++.. +..++.+|++.|.+++|+|+.+|++.
T Consensus 206 ~Pn~~dP~~~~a~a~~~~~~d~~~Y~~~vr~~t~k~A~~ 244 (323)
T 3ceg_A 206 EPYFNEPGYERSRGTPSGTQSSREYDGNIRQATVKWAML 244 (323)
T ss_dssp SGGGGSTTGGGGTTSHHHHHHHHHHHHHHHHHHHHHTTH
T ss_pred CCCCCCccCHHHHHhhhhhhhHHHHHHHHHHHHHHHhhH
Confidence 55 45543 24677899999999999999999974
No 46
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=4.7e-34 Score=244.86 Aligned_cols=115 Identities=26% Similarity=0.548 Sum_probs=107.1
Q ss_pred cCCCChHHHHHHHHHHHHHhhCCCCCeEEe--cCCCCceEEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCccccccc
Q 020053 5 RYNLKNPAVKRILQEVKEMQSNPSDDFMSL--PLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTV 82 (332)
Q Consensus 5 ~~~m~~~a~kRL~kEl~~l~~~p~~gi~v~--p~ednl~~W~v~I~GP~dTpYeGGiF~l~I~fP~~YP~~PP~V~FlT~ 82 (332)
..+|++. .+||++|+++|++++++|+.+. +.++|+++|+++|.||+|||||||+|+++|.||++||++||+|+|.|
T Consensus 17 ~~~Ms~~-~~RL~kEl~~l~~~~~~gi~v~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T- 94 (136)
T 2a7l_A 17 RGSMASM-QKRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTG- 94 (136)
T ss_dssp GGGGTTS-CHHHHHHHHHHHHSCCTTCCCCTTCCCCSCEEEEEEEECCTTSTTTTCEEEEEEEECTTTTTSCCEEEEES-
T ss_pred chhccHH-HHHHHHHHHHHHhCCCCCEEEEEeeCccccceeEEEEECCCCCccccEEEEEEEECCCCCCCCCCEEEEeC-
Confidence 4567664 3999999999999999999864 88999999999999999999999999999999999999999999999
Q ss_pred ccccccc--ccccccccCCceeecccccCCCCCCccccCCCeEEeecCCCCCCCCCCCCCHHHHHHHHHHhC
Q 020053 83 RCCSLME--HKSYCLCADYGVRTNVCAFFPPQPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFM 152 (332)
Q Consensus 83 ~~~~~i~--Hp~~~~~~~~~~~~n~~~~~h~~PNv~v~~~G~ICL~iL~~~~e~WsP~~ti~sVL~sI~~lL 152 (332)
++| | || |+.+|+|||++|+ ++|+|+++|++||++|++||
T Consensus 95 ----~i~~~H----------------------PN--V~~~G~ICL~iL~---~~WsP~~ti~~vL~sI~slL 135 (136)
T 2a7l_A 95 ----ENIPVH----------------------PH--VYSNGHICLSILT---EDWSPALSVQSVCLSIISML 135 (136)
T ss_dssp ----SCCCCB----------------------TT--BCTTCBBCCGGGT---TTCCTTSCHHHHHHHHHHHT
T ss_pred ----CCcCCC----------------------cc--CCCCCeEEchhcC---CCCCCCCcHHHHHHHHHHHh
Confidence 787 7 99 6789999999998 89999999999999999998
No 47
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=99.98 E-value=2e-32 Score=240.81 Aligned_cols=126 Identities=25% Similarity=0.325 Sum_probs=110.1
Q ss_pred CCCChHHHHHHHHHHHHHhhCCCCC-eEEec-CCCC--ceEEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccccc
Q 020053 6 YNLKNPAVKRILQEVKEMQSNPSDD-FMSLP-LEEN--IFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLT 81 (332)
Q Consensus 6 ~~m~~~a~kRL~kEl~~l~~~p~~g-i~v~p-~edn--l~~W~v~I~GP~dTpYeGGiF~l~I~fP~~YP~~PP~V~FlT 81 (332)
..+..++.+||++|+++|++++++| +.+.+ .++| +++|+++|.||++||||||+|+++|.||++||++||+|+|+|
T Consensus 20 ~~v~~p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~~l~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T 99 (160)
T 2a4d_A 20 TGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVT 99 (160)
T ss_dssp -CCCHHHHHHHHHHHHHHHSCCTTSSEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESB
T ss_pred CeeechHHHHHHHHHHHHHhCCCCCcEEEEecCCccccceeeEEEEECCCCCCccCeEEEEEEECCCcCCCCCcEEEEec
Confidence 3466789999999999999999888 77776 4554 999999999999999999999999999999999999999999
Q ss_pred ccccccccccccccccCCceeecccccCCCCCCcccc-CCCeEEeecCCCCCCCCCCCCCHHHHHHHHHHhCCC--CCCC
Q 020053 82 VRCCSLMEHKSYCLCADYGVRTNVCAFFPPQPNGRFE-TQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPT--NPNG 158 (332)
Q Consensus 82 ~~~~~~i~Hp~~~~~~~~~~~~n~~~~~h~~PNv~v~-~~G~ICL~iL~~~~e~WsP~~ti~sVL~sI~~lL~~--nP~~ 158 (332)
+||| || |+ .+|+||+++|+.+ ++|+|+++|++||++|++||.+ |+++
T Consensus 100 -----~i~H----------------------PN--V~~~~G~ICl~iL~~~-~~WsP~~ti~~vL~sI~~ll~~~pn~~~ 149 (160)
T 2a4d_A 100 -----KINM----------------------NG--VNSSNGVVDPRAISVL-AKWQNSYSIKVVLQELRRLMMSKENMKL 149 (160)
T ss_dssp -----CCCC----------------------TT--BCTTTCBBCGGGSHHH-HTCCTTCCHHHHHHHHHHHHTSTTTTTC
T ss_pred -----Ccee----------------------CC--EECCCCEEehhhcCCc-cCCCccCcHHHHHHHHHHHHccCCCCCC
Confidence 8888 99 56 7899999998633 6899999999999999999965 4445
Q ss_pred hhh
Q 020053 159 ALG 161 (332)
Q Consensus 159 ~~~ 161 (332)
+++
T Consensus 150 P~n 152 (160)
T 2a4d_A 150 PQP 152 (160)
T ss_dssp CCC
T ss_pred CCC
Confidence 543
No 48
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=99.97 E-value=1.8e-32 Score=239.85 Aligned_cols=129 Identities=22% Similarity=0.286 Sum_probs=110.5
Q ss_pred CCChHHHHHHHHHHHHHhhC-CCCCeEEecCC-C--CceEEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCccccccc
Q 020053 7 NLKNPAVKRILQEVKEMQSN-PSDDFMSLPLE-E--NIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTV 82 (332)
Q Consensus 7 ~m~~~a~kRL~kEl~~l~~~-p~~gi~v~p~e-d--nl~~W~v~I~GP~dTpYeGGiF~l~I~fP~~YP~~PP~V~FlT~ 82 (332)
....++.+||++||++|+++ ++.|+++.+.+ + |+++|+++|.||++||||||+|+++|.||++||++||+|+|+|
T Consensus 17 ~~~~~~~~RL~kEl~~l~~~~~~~~i~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~t- 95 (156)
T 2q0v_A 17 QGIVPRSFRLLDELERGQKGNVSEGVSFGLESADDITLSNWSCTIFGQPGTVFENRIYSLTIFCDDNYPDSPPTVKFDT- 95 (156)
T ss_dssp SSCCCHHHHHHHHHHHHHCC-CCTTEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESB-
T ss_pred cccchHHHHHHHHHHHHHhCCCCCCeEEEECCCccccceeeEEEEECCCCCCcCCcEEEEEEECCCcCCCCCCeEEEEc-
Confidence 44566899999999999998 78899988853 3 6999999999999999999999999999999999999999999
Q ss_pred cccccccccccccccCCceeecccccCCCCCCccccCCCeE---EeecCCCCCCCCCCCCCHHHHHHHHHHhCCC-CCCC
Q 020053 83 RCCSLMEHKSYCLCADYGVRTNVCAFFPPQPNGRFETQTKI---CLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNG 158 (332)
Q Consensus 83 ~~~~~i~Hp~~~~~~~~~~~~n~~~~~h~~PNv~v~~~G~I---CL~iL~~~~e~WsP~~ti~sVL~sI~~lL~~-nP~~ 158 (332)
+||| || |+.+|+| ||++|+ +|+|+++|++||++|++||.+ +|++
T Consensus 96 ----~i~H----------------------PN--V~~~G~icisCL~iL~----~WsP~~ti~~vL~sI~~ll~~Pn~~~ 143 (156)
T 2q0v_A 96 ----KIEM----------------------SC--VDNCGRVIKNNLHILK----NWNRNYTIETILISLRQEMLSSANKR 143 (156)
T ss_dssp ----CCCC----------------------TT--BCTTSBBCGGGSHHHH----TCCTTCCHHHHHHHHHHHTTSTTTTT
T ss_pred ----cccc----------------------CC--CccCCeEehhhccccc----CCCCcCcHHHHHHHHHHHHhCCCCCC
Confidence 8888 99 6788999 899995 499999999999999999964 5555
Q ss_pred hhh--hhHhhHH
Q 020053 159 ALG--SLDYKKE 168 (332)
Q Consensus 159 ~~~--a~~~~~~ 168 (332)
+++ ++.+|.+
T Consensus 144 p~n~~aa~~y~~ 155 (156)
T 2q0v_A 144 LPQPNEGEVYSN 155 (156)
T ss_dssp CCCCCTTCBC--
T ss_pred cCChHHHHHhhh
Confidence 443 3444433
No 49
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=99.97 E-value=4.7e-32 Score=232.03 Aligned_cols=111 Identities=21% Similarity=0.397 Sum_probs=99.1
Q ss_pred HHHHHHHHHHHHHhhC-CCCCeEEecCC-C--CceEEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCccccccccccc
Q 020053 11 PAVKRILQEVKEMQSN-PSDDFMSLPLE-E--NIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTVRCCS 86 (332)
Q Consensus 11 ~a~kRL~kEl~~l~~~-p~~gi~v~p~e-d--nl~~W~v~I~GP~dTpYeGGiF~l~I~fP~~YP~~PP~V~FlT~~~~~ 86 (332)
++.+||++|+++|+++ ++.|+++.+.+ + |+++|+++|.||++||||||+|+++|.||++||++||+|+|.|
T Consensus 6 ~~~~RL~kEl~~l~~~~~~~~~~~~~~~~~d~nl~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t----- 80 (138)
T 1jat_B 6 PRNFRLLEELEKGEKGFGPESCSYGLADSDDITMTKWNGTILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFIS----- 80 (138)
T ss_dssp CHHHHHHHHHHHHHC----CCEEEEESSTTCTTCCEEEEEEECCSSSTTTTCEEEEEEECCTTTTTSCCEEEESB-----
T ss_pred HHHHHHHHHHHHHHhcCCCCCEEEEeCCCCCCcceEEEEEEECCCCCCccceEEEEEEECCCCCCCCCCceEEEc-----
Confidence 5779999999999998 78899998853 3 5999999999999999999999999999999999999999999
Q ss_pred cccccccccccCCceeecccccCCCCCCccccCC-CeE--EeecCCCCCCCCCCCCCHHHHHHHHHHhCCC
Q 020053 87 LMEHKSYCLCADYGVRTNVCAFFPPQPNGRFETQ-TKI--CLSISNHHPEHWQPSWSVRTALVALIAFMPT 154 (332)
Q Consensus 87 ~i~Hp~~~~~~~~~~~~n~~~~~h~~PNv~v~~~-G~I--CL~iL~~~~e~WsP~~ti~sVL~sI~~lL~~ 154 (332)
+||| || |+.+ |.| ||++|+ +|+|+++|++||++|++||.+
T Consensus 81 ~i~H----------------------Pn--v~~~~G~i~~cL~~l~----~W~p~~~i~~vl~~i~~ll~~ 123 (138)
T 1jat_B 81 KINL----------------------PC--VNPTTGEVQTDFHTLR----DWKRAYTMETLLLDLRKEMAT 123 (138)
T ss_dssp CCCC----------------------TT--BCTTTCBBCTTSHHHH----TCCTTCCHHHHHHHHHHHHTS
T ss_pred cccc----------------------CC--EeCCCCEEeeecccCC----CCCCcCcHHHHHHHHHHHHcC
Confidence 8888 99 5665 999 999984 799999999999999999965
No 50
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=99.97 E-value=1.3e-32 Score=247.08 Aligned_cols=120 Identities=11% Similarity=0.339 Sum_probs=108.7
Q ss_pred ccCCCChHHHHHHHHHHHHHhhCC---CCCeEEecCCCCceEEEEEEeCC-CCCCCCC-----------CEEEEEEEcCC
Q 020053 4 DRYNLKNPAVKRILQEVKEMQSNP---SDDFMSLPLEENIFEWQFAIRGP-GDTEFEG-----------GIYHGRIQLPA 68 (332)
Q Consensus 4 ~~~~m~~~a~kRL~kEl~~l~~~p---~~gi~v~p~ednl~~W~v~I~GP-~dTpYeG-----------GiF~l~I~fP~ 68 (332)
....|+..+.+||++||++|++++ +.++.+.|.++|+++|+++|.|| ++|||+| |+|+|+|.||+
T Consensus 20 g~~~~s~~a~~RL~kEl~~l~~~~~~~~~~~~~~p~~dnl~~W~~~I~Gp~~~tpy~ggl~~~~~~~g~g~f~l~i~fp~ 99 (186)
T 1zuo_A 20 GAVSGSVQASDRLMKELRDIYRSQSYKTGIYSVELINDSLYDWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKD 99 (186)
T ss_dssp ----CCHHHHHHHHHHHHHHHTSHHHHTTSEEEEEETTEEEEEEEEECCCCTTSHHHHHHHHHHHHHSCCSEEEEEECCT
T ss_pred CcccccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEcCCccceeEEEEECCCCCCCccccchhhccccCceEEEEEEECCC
Confidence 456789999999999999999998 68899999999999999999998 8999998 89999999999
Q ss_pred CCCCCCCccccccccccccccccccccccCCceeecccccCCCCC-CccccCCCeEEeecCCCCCCCCCCCCCHHHHHHH
Q 020053 69 EYPFKPPSFMLLTVRCCSLMEHKSYCLCADYGVRTNVCAFFPPQP-NGRFETQTKICLSISNHHPEHWQPSWSVRTALVA 147 (332)
Q Consensus 69 ~YP~~PP~V~FlT~~~~~~i~Hp~~~~~~~~~~~~n~~~~~h~~P-Nv~v~~~G~ICL~iL~~~~e~WsP~~ti~sVL~s 147 (332)
+||++||+|+|.| ++|| | | |+.+|.|||++|. +++|+|+++|++||++
T Consensus 100 ~YP~~PP~V~f~t-----pi~h----------------------Pnn--V~~~G~ICL~iL~--~~~WsP~~ti~~VL~s 148 (186)
T 1zuo_A 100 NFPFDPPFVRVVL-----PVLS----------------------GGY--VLGGGALCMELLT--KQGWSSAYSIESVIMQ 148 (186)
T ss_dssp TTTSSCCEEEEEE-----SCEE----------------------STT--BCGGGBBCCGGGS--TTTCCTTSCHHHHHHH
T ss_pred CCCCCCCeEEEeC-----CccC----------------------CCc--cCCCCcEEeccCC--CCCCCCcCcHHHHHHH
Confidence 9999999999999 8888 8 6 6789999999996 3789999999999999
Q ss_pred HHHhCCC
Q 020053 148 LIAFMPT 154 (332)
Q Consensus 148 I~~lL~~ 154 (332)
|++||.+
T Consensus 149 I~slL~~ 155 (186)
T 1zuo_A 149 INATLVK 155 (186)
T ss_dssp HHHHHHH
T ss_pred HHHHHcC
Confidence 9999954
No 51
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=99.97 E-value=6.5e-32 Score=239.45 Aligned_cols=123 Identities=25% Similarity=0.332 Sum_probs=107.8
Q ss_pred ChHHHHHHHHHHHHHhhCCCCC-eEEec-CCCC--ceEEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCccccccccc
Q 020053 9 KNPAVKRILQEVKEMQSNPSDD-FMSLP-LEEN--IFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTVRC 84 (332)
Q Consensus 9 ~~~a~kRL~kEl~~l~~~p~~g-i~v~p-~edn--l~~W~v~I~GP~dTpYeGGiF~l~I~fP~~YP~~PP~V~FlT~~~ 84 (332)
..++.+||++||++|++++++| +.+.+ .++| +++|+++|.||++||||||+|+++|.||++||++||+|+|+|
T Consensus 33 ~~p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T--- 109 (170)
T 2hlw_A 33 KVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVT--- 109 (170)
T ss_dssp CCCHHHHHHHHHHHHHHCCGGGCEEEEESSTTCSSCCBEEEEECCCSSSTTSSCCBCEEEECCSSCTTSCCEEEECB---
T ss_pred cCHHHHHHHHHHHHHHhCCCCCcEEEEecCcccccceeeEEEEeCCCCCCcCCcEEEEEEECCCCCCCCCCeeEEec---
Confidence 4568999999999999999888 66766 4554 999999999999999999999999999999999999999999
Q ss_pred cccccccccccccCCceeecccccCCCCCCcccc-CCCeEEeecCCCCCCCCCCCCCHHHHHHHHHHhCCC--CCCChhh
Q 020053 85 CSLMEHKSYCLCADYGVRTNVCAFFPPQPNGRFE-TQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPT--NPNGALG 161 (332)
Q Consensus 85 ~~~i~Hp~~~~~~~~~~~~n~~~~~h~~PNv~v~-~~G~ICL~iL~~~~e~WsP~~ti~sVL~sI~~lL~~--nP~~~~~ 161 (332)
+||| || |+ .+|.||+++|+.+ ++|+|+++|++||++|++||.+ |++++++
T Consensus 110 --~i~H----------------------PN--V~~~~G~ICl~iL~~~-~~WsP~~ti~~vL~sI~~ll~~~pn~~~P~n 162 (170)
T 2hlw_A 110 --KINM----------------------NG--VNSSNGVVDPRAISVL-AKWQNSYSIKVVLQELRRLMMSKENMKLPQP 162 (170)
T ss_dssp --CCCC----------------------SS--BCSSSCBBCTTTCHHH-HTCCSSCCHHHHHHHHHHHHHSTTTSSSCCC
T ss_pred --cccc----------------------CC--EeCCCCEEEhhhcCCC-CCCCccCcHHHHHHHHHHHHccCCCCCCCCC
Confidence 8888 99 55 7999999998633 6899999999999999999965 4445443
No 52
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=99.86 E-value=2.8e-23 Score=183.54 Aligned_cols=98 Identities=16% Similarity=0.242 Sum_probs=88.7
Q ss_pred HHHHHHHHHHHHhhCCCCCeEEecCCCCceEEEEEEeCCCCCCCCCC----------EEEEEEEcCCCCCCCCCcccccc
Q 020053 12 AVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGG----------IYHGRIQLPAEYPFKPPSFMLLT 81 (332)
Q Consensus 12 a~kRL~kEl~~l~~~p~~gi~v~p~ednl~~W~v~I~GP~dTpYeGG----------iF~l~I~fP~~YP~~PP~V~FlT 81 (332)
-.+||++|++.|++ ++.+..+|++.|.++|.||.+|+|+|| .|.++|.||++||++||+|+|.+
T Consensus 33 w~~RL~eE~k~L~k------~v~p~k~n~~~W~~ii~Gp~gT~WeGgcw~~~~~~~y~F~L~~~fPe~YP~~PPeV~F~~ 106 (172)
T 2z6o_A 33 WVQRLKEEYQSLIR------YVENNKNADNDWFRLESNKEGTRWFGKCWYIHDLLKYEFDIEFDIPITYPTTAPEIAVPE 106 (172)
T ss_dssp HHHHHHHHHHHHHH------HHHHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCGG
T ss_pred HHHHHHHHHHHHHH------HhccCccccceeEEeecCCCCCcccCcccccccccceEEEEEEECCCCCCCCCCeeeeCC
Confidence 39999999999999 467788899999999999999999999 99999999999999999999999
Q ss_pred cccccc-ccccccccccCCceeecccccCCCCCCccccCCCeEEeecCCCCCC---CCCCCCCHHHHHH
Q 020053 82 VRCCSL-MEHKSYCLCADYGVRTNVCAFFPPQPNGRFETQTKICLSISNHHPE---HWQPSWSVRTALV 146 (332)
Q Consensus 82 ~~~~~~-i~Hp~~~~~~~~~~~~n~~~~~h~~PNv~v~~~G~ICL~iL~~~~e---~WsP~~ti~sVL~ 146 (332)
+ +|| || +|.+|+|||++|. .. .|+|.++|.++|.
T Consensus 107 -----~~~~h----------------------pn--mY~~G~ICLdIL~--kp~Ws~~~P~~~IahiL~ 144 (172)
T 2z6o_A 107 -----LDGKT----------------------AK--MYRGGKICLTDHF--KPLWARNVPKFGLAHLMA 144 (172)
T ss_dssp -----GTTTC----------------------SS--BCTTSBBCCCTTH--HHHHHHHTTSCCHHHHHH
T ss_pred -----CCCCC----------------------CC--CCCCCcEechhhc--cccccccCCccCHHHHHh
Confidence 6 888 99 7999999999994 13 3559999999984
No 53
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A*
Probab=99.54 E-value=1.1e-14 Score=128.43 Aligned_cols=116 Identities=16% Similarity=0.252 Sum_probs=87.3
Q ss_pred HHHHHHHHHHhhCCC---CCeEEecCCCCceEEEEEEeCCCCCCCCCCE---EEEEEEcCCCCCCCCCccccccc--ccc
Q 020053 14 KRILQEVKEMQSNPS---DDFMSLPLEENIFEWQFAIRGPGDTEFEGGI---YHGRIQLPAEYPFKPPSFMLLTV--RCC 85 (332)
Q Consensus 14 kRL~kEl~~l~~~p~---~gi~v~p~ednl~~W~v~I~GP~dTpYeGGi---F~l~I~fP~~YP~~PP~V~FlT~--~~~ 85 (332)
+|..+|+.++.+.-+ +...+...+|...++.+.+.|.-.++|+||. |.+.|.||.+||++||.|.|.++ .+.
T Consensus 31 ~~~~~dv~~~l~~yp~L~p~t~~yt~~dG~~~~Ll~l~Gtipv~y~g~~~Yn~pi~IwlP~~YP~~PP~v~v~p~t~~m~ 110 (162)
T 3r3q_A 31 RTTFHDSLALLDNFHSLRPRTRVFTHSDGTPQLLLSIYGTISTGEDGSSPHSIPVIMWVPSMYPVKPPFISINLENFDMN 110 (162)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEEEEECTTSCEEEEEEEEEEEECSCCTTSCCEEEEEEECCTTTTTSCCEEEECGGGCCTT
T ss_pred hHHHHHHHHHHHhCCCCceeeeeEEcCCCChheEEEEECccCccccCcccccccEEEEeCcccCCCCCEEEEECCCcccc
Confidence 567778887765332 1222334467777788888887789999999 88999999999999999977541 111
Q ss_pred ---cccc-ccccccccCCceeecccccCCCCCCccccCCCeEEeecCCCCCCCCCC-CCCHHHHHHHHHHhCCC-CCC
Q 020053 86 ---SLME-HKSYCLCADYGVRTNVCAFFPPQPNGRFETQTKICLSISNHHPEHWQP-SWSVRTALVALIAFMPT-NPN 157 (332)
Q Consensus 86 ---~~i~-Hp~~~~~~~~~~~~n~~~~~h~~PNv~v~~~G~ICL~iL~~~~e~WsP-~~ti~sVL~sI~~lL~~-nP~ 157 (332)
..|+ | || |+.+|+||+++|. +|+| ..++.++|.+|+++|.+ ||+
T Consensus 111 ~~~~~I~~h----------------------pn--VD~~G~I~lpyL~----~W~p~~s~L~~ll~~l~~lf~ep~~d 160 (162)
T 3r3q_A 111 TISSSLPIQ----------------------EY--IDSNGWIALPILH----AWDPAAMNLIMVVQELMSLLHEPPQD 160 (162)
T ss_dssp TSCTTSTHH----------------------HH--BCTTSBBCCGGGG----SCCGGGCCHHHHHHHHHHTTSCCCCC
T ss_pred ccccccCCC----------------------CC--CCCCCcEeCcccc----cCCCCcCcHHHHHHHHHHHhcCCCCC
Confidence 0144 5 89 6899999999994 6999 68999999999999954 443
No 54
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=99.49 E-value=3.4e-15 Score=130.04 Aligned_cols=91 Identities=19% Similarity=0.363 Sum_probs=74.8
Q ss_pred hHHHHHHHHHHHHHhhCCCCCeEEecCCCCceEEEEEEeCCCCCCCCCC----------EEEEEEEcCCCCCCCCCcccc
Q 020053 10 NPAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGG----------IYHGRIQLPAEYPFKPPSFML 79 (332)
Q Consensus 10 ~~a~kRL~kEl~~l~~~p~~gi~v~p~ednl~~W~v~I~GP~dTpYeGG----------iF~l~I~fP~~YP~~PP~V~F 79 (332)
..=..||..||..|.+ ++....++-..|...+.||.+|+|+|+ .|.++|.||.+||+.||.|.|
T Consensus 33 ~~w~~RlkeEy~alI~------yv~~nK~~d~dWf~~~sn~~GT~W~G~cw~~~~~~kyeFkLefdiP~tYP~tPPeI~F 106 (168)
T 3kpa_A 33 DKWTARLKEEYASLIT------YVEHNKASDSHWFHLESNPQGTRWYGTCWTYYKNEKYEFEMNFDIPVTYPQAPPEIAL 106 (168)
T ss_dssp HHHHHHHHHHHHHHHH------HHHHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBC
T ss_pred HHHHHHHHHHHHHHHH------HHHhcccccCCeeeecCCCCCCcccCccceeeccceeEEEEEEeCCccCCCCCCEeec
Confidence 3457899999999976 233333334489999999999999999 999999999999999999999
Q ss_pred ccccccccccccccccccCCceeecccccCCCCCCccccCCCeEEeecCCCCCCCCCCCCC
Q 020053 80 LTVRCCSLMEHKSYCLCADYGVRTNVCAFFPPQPNGRFETQTKICLSISNHHPEHWQPSWS 140 (332)
Q Consensus 80 lT~~~~~~i~Hp~~~~~~~~~~~~n~~~~~h~~PNv~v~~~G~ICL~iL~~~~e~WsP~~t 140 (332)
.+. .++| || ++.+|+|||+++ |+|.|+
T Consensus 107 p~l----dgkt----------------------~k--mYr~GkICLdIh------wkPlW~ 133 (168)
T 3kpa_A 107 PEL----EGKT----------------------VK--MYRGGKICMTTH------FFPLWA 133 (168)
T ss_dssp GGG----TTTC----------------------SS--EETTTEECCCTT------HHHHHH
T ss_pred ccc----cCcC----------------------cc--ccCCCcEEeccc------cchhhH
Confidence 992 2667 99 799999999975 777653
No 55
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A
Probab=99.13 E-value=3.2e-11 Score=104.63 Aligned_cols=106 Identities=18% Similarity=0.307 Sum_probs=78.9
Q ss_pred HHHHHHHHhhCCCC---CeEEe-cCCCCceEEEEEEeCCCCCCCCCCEEEE--EEEcCCCCCCCCCccccccccccccc-
Q 020053 16 ILQEVKEMQSNPSD---DFMSL-PLEENIFEWQFAIRGPGDTEFEGGIYHG--RIQLPAEYPFKPPSFMLLTVRCCSLM- 88 (332)
Q Consensus 16 L~kEl~~l~~~p~~---gi~v~-p~ednl~~W~v~I~GP~dTpYeGGiF~l--~I~fP~~YP~~PP~V~FlT~~~~~~i- 88 (332)
..+|+.++.+.-+. ..... -...+++.|.++|. .+|+|+.|.+ .|.||.+||++||.| |.++ +..|
T Consensus 25 t~~dv~~vl~~yp~L~p~~~~y~G~~~~LL~l~GtIp----v~y~g~~y~iPi~Iwlp~~YP~~pP~v-fv~p--t~~m~ 97 (146)
T 3obq_A 25 TVRETVNVITLYKDLKPVLDSYGTGSRELMNLTGTIP----VPYRGNTYNIPICLWLLDTYPYNPPIC-FVKP--TSSMT 97 (146)
T ss_dssp HHHHHHHHHHHCTTEEEEEEESSSTTCEEEEEEEEEE----EECSSCEEEEEEEEECCTTTTTSCCEE-EECC--CTTEE
T ss_pred hHHHHHHHHHhCCCCceEeeeeeCChheEEEEEEEee----eeecCccccceEEEEeCccCCCCCCEE-EEeC--CCCCE
Confidence 35577766554321 11111 23568999999997 6899999994 999999999999999 6662 1112
Q ss_pred --cccccccccCCceeecccccCCCCCCccccCCCeEEeecCCCCCCCCCC-CCCHHHHHHHHHHhCCCCC
Q 020053 89 --EHKSYCLCADYGVRTNVCAFFPPQPNGRFETQTKICLSISNHHPEHWQP-SWSVRTALVALIAFMPTNP 156 (332)
Q Consensus 89 --~Hp~~~~~~~~~~~~n~~~~~h~~PNv~v~~~G~ICL~iL~~~~e~WsP-~~ti~sVL~sI~~lL~~nP 156 (332)
.| || ++.+|+||++.|. +|++ ..+|.+++..++..|.++|
T Consensus 98 I~~~----------------------~~--Vd~~G~i~lpyL~----~W~~~~snL~~ll~~l~~~F~~ep 140 (146)
T 3obq_A 98 IKTG----------------------KH--VDANGKIYLPYLH----EWKHPQSDLLGLIQVMIVVFGDEP 140 (146)
T ss_dssp ECCB----------------------TT--BCTTCBBCCHHHH----TCCTTTCCHHHHHHHHHHHHHHSC
T ss_pred ECCC----------------------CC--CCCCCCEeccccc----ccCCCCCCHHHHHHHHHHHHhhCC
Confidence 33 88 7899999999995 4987 8999999999999986544
No 56
>2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae}
Probab=93.54 E-value=0.31 Score=40.15 Aligned_cols=69 Identities=16% Similarity=0.237 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHhhCCCCCeEEecCC------CCceEEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccccc
Q 020053 12 AVKRILQEVKEMQSNPSDDFMSLPLE------ENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLT 81 (332)
Q Consensus 12 a~kRL~kEl~~l~~~p~~gi~v~p~e------dnl~~W~v~I~GP~dTpYeGGiF~l~I~fP~~YP~~PP~V~FlT 81 (332)
...+-..|+..|+.--++.+...-.. +....+.+.|....+ .-..-.+.+.|.||.+||..+|.|.+..
T Consensus 11 ~~e~q~~EleaL~SIY~d~~~~~~~~~~~~~~~~~~~f~I~l~~~~~-~~~~~~~~L~~~~p~~YP~~~P~i~l~~ 85 (138)
T 2yz0_A 11 YYEIQCNELEAIRSIYMDDFTDLTKRKSSWDKQPQIIFEITLRSVDK-EPVESSITLHFAMTPMYPYTAPEIEFKN 85 (138)
T ss_dssp HHHHHHHHHHHHHTTSSSSEECCSTTSSSSCSSCCSCEEEEEECSSC-SSCCCEEEEEEECCSSTTSSCCEEEEEC
T ss_pred hHHHHHHHHHHHHHHChhhheecccccccccCCCCcEEEEEEecCCC-CCCceEEEEEEECCCCCCCCCCeEEEec
Confidence 44566788888887555555432111 124567777773322 1123477899999999999999988766
No 57
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.25 E-value=0.25 Score=40.16 Aligned_cols=68 Identities=16% Similarity=0.221 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHhhCCCCCeEEecCCCCceEEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccccc
Q 020053 12 AVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLT 81 (332)
Q Consensus 12 a~kRL~kEl~~l~~~p~~gi~v~p~ednl~~W~v~I~GP~dTpYeGGiF~l~I~fP~~YP~~PP~V~FlT 81 (332)
...+...|+..|..--++.+.+. .+....+.+.|..-.+..-+.-.+.+.|.||.+||..||.+.+..
T Consensus 11 ~~e~q~~EleaL~sIy~d~~~~~--~~~~~~~~i~i~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 78 (128)
T 2ebm_A 11 YGEEQRNELEALESIYPDSFTVL--SENPPSFTITVTSEAGENDETVQTTLKFTYSEKYPDEAPLYEIFS 78 (128)
T ss_dssp HHHHHHHHHHHHHHHCSSSEEEC--CSSSCEEEECCBCCCCTTSCCCBEEEEEECCSSTTTSCCEEEEEE
T ss_pred hHHHHHHHHHHHHHHccCceEEc--cCCCCEEEEEEecCCCCCcCceeEEEEEEeCCCCCCCCceEEEEc
Confidence 45667889999987555556543 222356666665222222234478899999999999999987765
No 58
>2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A
Probab=92.47 E-value=0.51 Score=38.30 Aligned_cols=67 Identities=18% Similarity=0.249 Sum_probs=44.2
Q ss_pred HHHHHHHHHhhCCCCCeEEecCC--CCceEEEEEEeCCCCCCC--CCCEEEEEEEcCCCCCCCCCcccccc
Q 020053 15 RILQEVKEMQSNPSDDFMSLPLE--ENIFEWQFAIRGPGDTEF--EGGIYHGRIQLPAEYPFKPPSFMLLT 81 (332)
Q Consensus 15 RL~kEl~~l~~~p~~gi~v~p~e--dnl~~W~v~I~GP~dTpY--eGGiF~l~I~fP~~YP~~PP~V~FlT 81 (332)
....|+..|+.--++.+...... .+...+.+.|..+.+..- ..-.+.+.|.||.+||..+|.+.+.+
T Consensus 12 ~~~~EleaL~SIY~de~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~L~~~~p~~YP~~~P~i~~~~ 82 (128)
T 2day_A 12 VLPSEVEVLESIYLDELQVIKGNGRTSPWEIYITLHPATAEDQDSQYVCFTLVLQVPAEYPHEVPQISIRN 82 (128)
T ss_dssp HHHHHHHHHHHHSTTTEEEECCTTSSCCEEEEEEECCSCCSSSSCCCCEEEEEEEECSSTTSSCCEEEEEE
T ss_pred HHHHHHHHHHHHCCCceEEecCCCCCCCeEEEEEEecCCCCCccccceeEEEEEEcCCCCCCCCCCeEEEc
Confidence 57889998887655666554322 234556666653222111 12478899999999999999988776
No 59
>3zqs_A E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A {Homo sapiens}
Probab=90.78 E-value=2.1 Score=38.09 Aligned_cols=82 Identities=16% Similarity=0.306 Sum_probs=60.6
Q ss_pred HHHHHHHHHhhCCCCCeEEecCCCCceEEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCccccccccccccccccccc
Q 020053 15 RILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTVRCCSLMEHKSYC 94 (332)
Q Consensus 15 RL~kEl~~l~~~p~~gi~v~p~ednl~~W~v~I~GP~dTpYeGGiF~l~I~fP~~YP~~PP~V~FlT~~~~~~i~Hp~~~ 94 (332)
+|.+|+.++-=+. +.-.+.++...++.+..- .|....++|.++.+||.++|.+...-
T Consensus 5 ~li~Ei~~iGW~~-----l~~id~~~~~i~l~~~D~-----~gR~H~l~v~l~~~yp~~~P~~~~Dl------------- 61 (186)
T 3zqs_A 5 SLIEEIGTLGWDK-----LVYADTCFSTIKLKAEDA-----SGREHLITLKLKAKYPAESPDYFVDF------------- 61 (186)
T ss_dssp SHHHHHHHHCGGG-----EEEECTTSSEEEEEEECT-----TSCEEEEEEECCTTTTTSCCEEECCC-------------
T ss_pred HHHHHHHHhCCce-----eeeecCCccEEEEEEEeC-----CCCeEEEEEEECCCCCCCCCeeEEcC-------------
Confidence 6888999883322 222356788899999832 36788999999999999999876655
Q ss_pred cccCCceeecccccCCCCCCccccCCCeEEeecCCCCCCCCCCCCCHHHHHHHHHHhC
Q 020053 95 LCADYGVRTNVCAFFPPQPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFM 152 (332)
Q Consensus 95 ~~~~~~~~~n~~~~~h~~PNv~v~~~G~ICL~iL~~~~e~WsP~~ti~sVL~sI~~lL 152 (332)
|-- + . -.|++..++.+++...+.+|
T Consensus 62 ------------------P~~-~-----------~---~~w~~~ssL~~v~~qF~~~L 86 (186)
T 3zqs_A 62 ------------------PVP-F-----------C---ASWTPQSSLISIYSQFLAAI 86 (186)
T ss_dssp ------------------SSC-C-----------C---CCCCTTCCHHHHHHHHHHHH
T ss_pred ------------------CCC-c-----------c---cccCCCccHHHHHHHHHHHH
Confidence 220 0 1 35999999999999888776
No 60
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=87.40 E-value=1.4 Score=35.85 Aligned_cols=66 Identities=14% Similarity=0.143 Sum_probs=41.0
Q ss_pred HHHHHHHHHhhCCCC--CeEEecC-CCCceEEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccccc
Q 020053 15 RILQEVKEMQSNPSD--DFMSLPL-EENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLT 81 (332)
Q Consensus 15 RL~kEl~~l~~~p~~--gi~v~p~-ednl~~W~v~I~GP~dTpYeGGiF~l~I~fP~~YP~~PP~V~FlT 81 (332)
+...|+..|+.--.+ .+...-. ..+...+.+.|...... =..-.+.+.|.||.+||..+|.+.+..
T Consensus 11 ~q~~EleaL~SIy~d~~e~~~~~~~~~~~~~f~i~l~~~~~~-~~~~~~~L~~~~p~~YP~~~P~i~l~~ 79 (128)
T 2ebk_A 11 PVQEELSVLAAIFCRPHEWEVLSRSETDGTVFRIHTKAEGFM-DADIPLELVFHLPVNYPSCLPGISINS 79 (128)
T ss_dssp HHHHHHHHHHHHHCCTTTCCCSEECSSSCEEEEEEEECCTTT-TCCCEEEEEEEECSSTTSSCCCCCCCC
T ss_pred HHHHHHHHHHHHcCCCCceEEecCCCCCCCeEEEEecCCCCC-CCCeEEEEEEECCCCCCCCCCeEEEEh
Confidence 466788888763322 3432211 12346788888732210 012378999999999999999987654
No 61
>1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3
Probab=86.76 E-value=2.5 Score=34.46 Aligned_cols=69 Identities=19% Similarity=0.186 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHhhCCCCCeEEecCCC-----CceEEEEEEeCCCC-CCC-CCCEEEEEEEcCCCCCCCCCcccccc
Q 020053 12 AVKRILQEVKEMQSNPSDDFMSLPLEE-----NIFEWQFAIRGPGD-TEF-EGGIYHGRIQLPAEYPFKPPSFMLLT 81 (332)
Q Consensus 12 a~kRL~kEl~~l~~~p~~gi~v~p~ed-----nl~~W~v~I~GP~d-TpY-eGGiF~l~I~fP~~YP~~PP~V~FlT 81 (332)
...+...|+..|+.--.+.+....... ....+.+.|. |.+ .-- ..-.+.|.|.||.+||..+|.|.+..
T Consensus 11 ~~e~q~~EleaL~SIY~d~~~~~~~~~~~~~~~~~~~~i~l~-~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 86 (137)
T 1ukx_A 11 YSQRQDHELQALEAIYGSDFQDLRPDARGRVREPPEINLVLY-PQGLAGEEVYVQVELRVKCPPTYPDVVPEIDLKN 86 (137)
T ss_dssp HHHHHHHHHHHHHHHTSSSEEECCCCCSSSCCCCCCEEEEEC-CTTSCSSSCSCEEEEEECCCTTTTSSCCCCEEEE
T ss_pred hHHHHHHHHHHHHHHCcccceeccCcccCccCCCcEEEEEEe-cCCcCCcccceEEEEEEECCCCCCCCCCcEEEec
Confidence 445677899888875555555432211 1345666665 321 100 12368899999999999999998755
No 62
>2daw_A RWD domain containing protein 2; alpha+beta sandwich fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=77.88 E-value=5 Score=33.90 Aligned_cols=23 Identities=13% Similarity=0.330 Sum_probs=21.0
Q ss_pred EEEEEEEcCCCCCCCCCcccccc
Q 020053 59 IYHGRIQLPAEYPFKPPSFMLLT 81 (332)
Q Consensus 59 iF~l~I~fP~~YP~~PP~V~FlT 81 (332)
.+.++|.||.+||..+|.+....
T Consensus 76 ~i~L~v~lP~~YP~~~P~i~l~~ 98 (154)
T 2daw_A 76 KIDLQVTMPHSYPYLALQLFGRS 98 (154)
T ss_dssp EEEEEEEECSSTTSSCCEEEEEC
T ss_pred eEEEEEEcCCCCCCCCCcEEEEe
Confidence 78999999999999999988666
No 63
>2dax_A Protein C21ORF6; RWD domain, alpha+beta sandwich fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=75.62 E-value=6.6 Score=32.78 Aligned_cols=23 Identities=22% Similarity=0.411 Sum_probs=20.5
Q ss_pred EEEEEEEcCCCCCCCCCcccccc
Q 020053 59 IYHGRIQLPAEYPFKPPSFMLLT 81 (332)
Q Consensus 59 iF~l~I~fP~~YP~~PP~V~FlT 81 (332)
.+.+.|.+|.+||..||.+.+..
T Consensus 74 ~l~L~v~lP~~YP~~~P~i~l~~ 96 (152)
T 2dax_A 74 MFSLACILPFKYPAVLPEITVRS 96 (152)
T ss_dssp EEEEEEEECSSTTSSCCCCEEEC
T ss_pred eEEEEEECCCCCCCCCCeEEEEc
Confidence 57899999999999999998766
No 64
>1b9u_A Protein (ATP synthase); membrane protein, hydrolase; HET: GMA; NMR {Synthetic} SCOP: j.35.1.1
Probab=38.39 E-value=26 Score=22.04 Aligned_cols=20 Identities=20% Similarity=0.413 Sum_probs=15.1
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 020053 300 TWAAVGLTIAILVLLLKKFM 319 (332)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~ 319 (332)
|+..-.+...|++++++||+
T Consensus 6 ~l~~~~i~Flil~~~l~kf~ 25 (34)
T 1b9u_A 6 TILGQAIAFVLFVLFCMKYV 25 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 45555567788889999986
No 65
>1rkl_A Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 4 kDa subunit; membrane protein; NMR {Synthetic} SCOP: f.23.30.1
Probab=24.26 E-value=71 Score=21.18 Aligned_cols=28 Identities=18% Similarity=0.314 Sum_probs=17.7
Q ss_pred ccchhHHHHHHHHHHHHHHHH-HHHHHhc
Q 020053 295 DDRLFTWAAVGLTIAILVLLL-KKFMKSN 322 (332)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 322 (332)
+|--|..+|..|++++++|++ --|+..|
T Consensus 3 sD~qL~~lan~lG~~~~~LIvlYH~v~~n 31 (36)
T 1rkl_A 3 SDEQLNSLAITFGIVMMTLIVIYHAVDST 31 (36)
T ss_dssp SSCGGGHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 455566677788888877754 4454443
No 66
>3u3c_B Paxillin LD2 peptide; 4-helix bundle, focal adhesion, tyrosine kinase, transferase-signaling protein complex; 3.70A {Homo sapiens}
Probab=23.39 E-value=48 Score=20.03 Aligned_cols=20 Identities=30% Similarity=0.587 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHHhhCCCCCe
Q 020053 12 AVKRILQEVKEMQSNPSDDF 31 (332)
Q Consensus 12 a~kRL~kEl~~l~~~p~~gi 31 (332)
-+.||.-|+...+.+|+.|.
T Consensus 6 eldrlllelnavqhnppsg~ 25 (26)
T 3u3c_B 6 ELDRLLLELNAVQHNPPSGX 25 (26)
T ss_pred HHHHHHHHHhhhccCCCCCC
Confidence 57899999999999998874
No 67
>2lat_A Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4; membrane protein, oligosaccharyltransferase, integral membra protein; NMR {Homo sapiens}
Probab=23.36 E-value=74 Score=21.19 Aligned_cols=28 Identities=21% Similarity=0.328 Sum_probs=18.6
Q ss_pred ccchhHHHHHHHHHHHHHHH-HHHHHHhc
Q 020053 295 DDRLFTWAAVGLTIAILVLL-LKKFMKSN 322 (332)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 322 (332)
+|--|..+|..|++++++|+ +--|+..|
T Consensus 3 sD~qL~~lan~lG~~~~~LIVlYH~v~~n 31 (37)
T 2lat_A 3 TDVQLAIFANMLGVSLFLLVVLYHYVAVN 31 (37)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 45556667788888887775 44565554
Done!