BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020054
(332 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6DJ13|ZN830_XENTR Zinc finger protein 830 OS=Xenopus tropicalis GN=znf830 PE=2 SV=1
Length = 357
Score = 68.6 bits (166), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 162/368 (44%), Gaps = 60/368 (16%)
Query: 2 DAARKKAI----FRAKLNAQKK----EKRINSPLVRYNEFDQPVCRVCDVVLKSDSQWDA 53
DA +KK + R + A+++ +KRI SPL +YN +C VC++ +KS+ W A
Sbjct: 3 DAGKKKLVQQEELRRLMKAKQRRSCSKKRIESPLAKYNSLGHLLCVVCNIQIKSELLWPA 62
Query: 54 HQASRKHHEAIKNIKAGATGNNSRMVSDAAKPEAGRESSRSESRSASQNAEIESSAKLGK 113
H ++H E + +K G+ + + S + K + R S +Q ++ +
Sbjct: 63 HILGKQHKEKVAELK----GSKANISSPSNKVQLHHIMKRKGSEPENQESKRIKGTEDQP 118
Query: 114 ARTSSVLPSNFFDSQEAKRP-----KTDSVKLV--------------DPDSNKTSGVSAK 154
+ LP FF+++E K S+KL+ + N+ S K
Sbjct: 119 TALKTKLPEGFFETEETSSAKHAAEKAPSLKLLAGDYEDDDEVEGEEYENVNEASTSLQK 178
Query: 155 TQAMKSVVLENEMDELPNGNAVDAKKGQPLKEHP---------EKSKQSVDSEAKQIKGA 205
+ + D LP + ++K PL H EK + D+ A+ A
Sbjct: 179 PAEIPLPPPTSSADRLP-ADFFESK--MPLVSHSGSVLKADIQEKIVERKDNTAE----A 231
Query: 206 LPEGFFDNKEADLLARGIKPVKPDVKDEYKEYEKLIQEDLKQVDDRFEEEEIDAAEMIEE 265
LPEGFFD+ EAD R + K + E++E++K I++ + V D EE + + +
Sbjct: 232 LPEGFFDDPEADAKVRKVDAPKDQMDKEWEEFQKEIRQ-VNSVSDAIVAEEDEEGRLDRQ 290
Query: 266 YESVDQK--TFREKVEALRKKKMEWEAASRSA-KSRGSSEVARKEPTKEELSSDDDSE-- 320
+ +D++ +R +VE LR K + A KS+ S + +EE+ SDD+
Sbjct: 291 IDEIDEQIECYR-RVEHLRDLKDTLQDAKMEVLKSKSSKK------WQEEIGSDDEETLP 343
Query: 321 EIFAVDWR 328
+ +WR
Sbjct: 344 SLLYKNWR 351
>sp|Q8R1N0|ZN830_MOUSE Zinc finger protein 830 OS=Mus musculus GN=Znf830 PE=1 SV=1
Length = 363
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 160/352 (45%), Gaps = 46/352 (13%)
Query: 9 IFRAKLNAQKKEKRINSPLVRYNEFDQPVCRVCDVVLKSDSQWDAHQASRKHHEAIKNIK 68
+ R K KRI SP +YN Q C +C+ +KS+ W H ++H E + +K
Sbjct: 24 LMREKQRLSTNRKRIESPFAKYNRLGQLSCALCNTPVKSELLWQTHVLGKQHRERVAELK 83
Query: 69 A--GAT-GNNSRMVSDAAKPEAGR-ESSRSESRSASQNAEIE-----SSAKLGKARTS-- 117
GAT G ++ V A K A ES ++ AS +++ SSA L AR +
Sbjct: 84 GAKGATQGPSTGTVPQATKRRATDVESQDAKKAKASAGPQVQPSTSASSANLDAARAAPS 143
Query: 118 ----SVLPSNFFD-----SQEAKRPKTDSVKLVDPDSNKTSGVSAKTQAMKSVVLENEMD 168
+LP ++ D + + DS K + PD+ A + S VL N+
Sbjct: 144 KPGLGLLP-DYDDEEEEEEEGGGEERRDSSKHL-PDAQGKEHSLASPRETTSNVLPND-- 199
Query: 169 ELP-NGNAVDAKKGQPLKEHP---EKSK--QSVDSEAKQIKGALPEGFFDNKEADLLARG 222
P N N A PL H EK++ + V + ALPEGFFD+ E D R
Sbjct: 200 --PFNTNPPKA----PLVPHSGSIEKAEIHEKVVERRENTAEALPEGFFDDPEVDAKVRK 253
Query: 223 IKPVKPDVKDEYKEYEKLIQEDLKQVDDRFEEEEIDAAEMIEEYESVDQK--TFREKVEA 280
+ K + E+ E++K +++ + + + EE + + + +D++ +R +VE
Sbjct: 254 VDAPKDQMDKEWDEFQKAMRQ-VNTISEAIVAEEDEEGRLDRQIGEIDEQIECYR-RVEK 311
Query: 281 LRKKKMEWEAASRSAKSRGSSEVARKEPTKEELSSDDDSE--EIFAVDWRAQ 330
LR ++ E + + + E+ +KE +E + SDD+ E ++ + DWR +
Sbjct: 312 LRNRQDEIKNKLKEVLT--IKELQKKE--EENVDSDDEGELQDLLSQDWRVK 359
>sp|Q63ZM9|ZN830_XENLA Zinc finger protein 830 OS=Xenopus laevis GN=znf830 PE=2 SV=1
Length = 356
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 134/300 (44%), Gaps = 30/300 (10%)
Query: 9 IFRAKLNAQKKEKRINSPLVRYNEFDQPVCRVCDVVLKSDSQWDAHQASRKHHEAIKNIK 68
+ +AK +KRI SPL +YN C VC+ ++KS+ W AH ++H E + +K
Sbjct: 18 LMKAKQRESSSKKRIESPLAKYNSLGHLSCVVCNSLIKSELLWPAHILGKQHKEKVAELK 77
Query: 69 AGATGNNSRMVSDAAKPEAGRESSRSESRSASQNAEIESSAKLGKARTSSVLPSNFFDSQ 128
G + S + E R + R S Q ++ ++ + +++ LP FF+ +
Sbjct: 78 ----GTKATTSSPSNTIEYPRITKRKGSEPEKQESKRTKGSEDHPSASTTKLPEEFFEKE 133
Query: 129 EAKRP-KTDSVKLVDPDSNKTSGVSAKT--------QAMKSVVLENEMDELPNGNAVD-- 177
+ S+KL+ D A+ +A S++ E+ P ++ D
Sbjct: 134 KTSSAGNAPSLKLLAGDYEDVDDDDAEEGEEYENAKEASSSLLKPAEIPLPPPTSSADNL 193
Query: 178 ----AKKGQPLKEHPEKSKQSVDSEAKQIKG------ALPEGFFDNKEADLLARGIKPVK 227
+ PL H S D + K ++ ALPEGFFD+ E D R + K
Sbjct: 194 PADFFENKMPLVSH-SGSVLKADIQEKIVERKENTAEALPEGFFDDPEVDAKVRKVDAPK 252
Query: 228 PDVKDEYKEYEKLIQEDLKQVDDRFEEEEIDAAEMIEEYESVDQ--KTFREKVEALRKKK 285
+ E++E++K I++ + V + EE + + + + +D+ + +R +VE LR +K
Sbjct: 253 DQMDKEWEEFQKEIRQ-VNTVSEAIVAEEDEEGRLDRQIDEIDEQIQCYR-RVEHLRDRK 310
>sp|Q3MHS2|ZN830_RAT Zinc finger protein 830 OS=Rattus norvegicus GN=Znf830 PE=2 SV=1
Length = 370
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 142/348 (40%), Gaps = 55/348 (15%)
Query: 21 KRINSPLVRYNEFDQPVCRVCDVVLKSDSQWDAHQASRKHHEAIKNIKAGATGNNSRMVS 80
KRI SP +YN Q C +C+ +KS+ W H ++H E + +K GA G +
Sbjct: 36 KRIESPFAKYNRLGQLSCALCNTPVKSELLWQTHVLGKQHRERVAELK-GAKGATQGPSA 94
Query: 81 DAAKPEAGRESSRSESRSASQNAEIESSAKLGKARTSSVLPS------NFFDS-QEAKRP 133
A R+++ ES+ AK KA V PS NF S +EA R
Sbjct: 95 GTAPQPTKRKTTDVESQ----------DAKKAKASVDQVQPSTSASSANFEKSGKEATRV 144
Query: 134 KTDSVKL-VDPDSNKTSGVSAKTQAMKSVVLENEMDELPNG------------NAVDAKK 180
+ L + PD + + + + LP+ +
Sbjct: 145 ASSKTGLGLLPDYEEEEEEEEEEELGGGEERRDSSKHLPDAQGREHSLASPRETTSNVLP 204
Query: 181 GQPLKEHPEKS--------------KQSVDSEAKQIKGALPEGFFDNKEADLLARGIKPV 226
P +P K+ + V + ALPEGFFD+ E D R +
Sbjct: 205 NDPFNTNPPKAPLVPHSGSIEKAEIHEKVVERRENTAEALPEGFFDDPEVDAKVRKVDAP 264
Query: 227 KPDVKDEYKEYEKLIQEDLKQVDDRFEEEEIDAAEMIEEYESVDQK--TFREKVEALRKK 284
K + E+ E++K +++ + + + EE + + + +D++ +R +VE LR +
Sbjct: 265 KDQMDKEWDEFQKAMRQ-VNTISEAIVAEEDEEGRLDRQIGEIDEQIECYR-RVEKLRNR 322
Query: 285 KMEWEAASRSAKSRGSSEVARKEPTKEELSSDDDSE--EIFAVDWRAQ 330
+ E + + + E+ +KE +E + SDD+ E ++ + DWR +
Sbjct: 323 QDEIKNKLKEVLT--IKELQKKE--EENVDSDDEGELQDLLSQDWRVK 366
>sp|Q6P0I6|ZN830_DANRE Zinc finger protein 830 OS=Danio rerio GN=znf830 PE=2 SV=1
Length = 326
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 104/262 (39%), Gaps = 81/262 (30%)
Query: 19 KEKRINSPLVRYNEFDQPVCRVCDVVLKSDSQWDAHQASRKHHEAIKNIKAGATGNNSRM 78
++KR+ SP RY+ Q +C +CD +K+ W H ++H + ++ +K+ ++
Sbjct: 31 RQKRVESPFARYSGAGQLMCALCDAPVKNALLWQTHVLGKQHKDKLQELKSRTAPAHTPA 90
Query: 79 V--SDAAKPEAGRESSRSESRSASQNAEIESSAKL------------------------- 111
+ A P A SS + R+A AKL
Sbjct: 91 PAHTPAHTPAAASSSSSTLKRAAEPPPAPGKRAKLQTGAGAGLGLLAGHYDDDDDDEGGA 150
Query: 112 GKARTS----SVLPSNFFDSQEAKRPKTDSVKLVDPDSNKTSGVSAKTQAMKSVVLENEM 167
G+ +T+ S LP++FFDS A P P S+ SG +K + +S
Sbjct: 151 GERKTAPPTDSALPADFFDSGPAPAP---------PISH--SGSVSKAEQQES------- 192
Query: 168 DELPNGNAVDAKKGQPLKEHPEKSKQSVDSEAKQIKGALPEGFFDNKEADLLARGIKPVK 227
+E PE +S LPEGFFD+ D R + K
Sbjct: 193 -----------------QEPPENRPES-----------LPEGFFDDPVRDAQVRQVDTPK 224
Query: 228 PDVKDEYKEYEKLIQEDLKQVD 249
++ E++E++K +++QV+
Sbjct: 225 DQLEREWEEFQK----EMRQVN 242
>sp|Q96NB3|ZN830_HUMAN Zinc finger protein 830 OS=Homo sapiens GN=ZNF830 PE=1 SV=2
Length = 372
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 26/50 (52%)
Query: 21 KRINSPLVRYNEFDQPVCRVCDVVLKSDSQWDAHQASRKHHEAIKNIKAG 70
KRI SP +YN Q C +C+ +KS+ W H ++H E + +K
Sbjct: 36 KRIESPFAKYNRLGQLSCALCNTPVKSELLWQTHVLGKQHREKVAELKGA 85
>sp|Q8BXJ8|Z385B_MOUSE Zinc finger protein 385B OS=Mus musculus GN=Znf385b PE=2 SV=1
Length = 482
Score = 37.0 bits (84), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 18/98 (18%)
Query: 38 CRVCDVVLKSDSQWDAHQASRKHHEAIKNIKAGATGNNSRMVS--DAAK--------PEA 87
C VC + SDSQ +AH KH + +K ++ AT N +MV D+AK P
Sbjct: 171 CNVCQLRFNSDSQAEAHYKGSKHAKKVKALE--ATKNKPKMVPSKDSAKANPSCSIRPGT 228
Query: 88 GRESSRSE------SRSASQNAEIESSAKLGKARTSSV 119
G S +SE + S+SQ + E + L K+ T+ +
Sbjct: 229 GDSSDKSEDKGKIKATSSSQPSGSEGGSFLLKSGTTPL 266
>sp|Q569K4|Z385B_HUMAN Zinc finger protein 385B OS=Homo sapiens GN=ZNF385B PE=2 SV=1
Length = 471
Score = 35.0 bits (79), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 33/68 (48%), Gaps = 12/68 (17%)
Query: 38 CRVCDVVLKSDSQWDAHQASRKHHEAIKNIKAGATGNNSRMVS--DAAK--------PEA 87
C VC + SDSQ +AH KH + +K + AT N +MV D+AK P
Sbjct: 159 CNVCQLRFNSDSQAEAHYKGSKHAKKVKALD--ATKNKPKMVPSKDSAKANPSCSITPIT 216
Query: 88 GRESSRSE 95
G S +SE
Sbjct: 217 GNNSDKSE 224
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.306 0.122 0.327
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 115,145,103
Number of Sequences: 539616
Number of extensions: 4682163
Number of successful extensions: 21935
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 119
Number of HSP's successfully gapped in prelim test: 1045
Number of HSP's that attempted gapping in prelim test: 19607
Number of HSP's gapped (non-prelim): 2596
length of query: 332
length of database: 191,569,459
effective HSP length: 118
effective length of query: 214
effective length of database: 127,894,771
effective search space: 27369480994
effective search space used: 27369480994
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (22.0 bits)
S2: 61 (28.1 bits)