Query 020055
Match_columns 332
No_of_seqs 178 out of 732
Neff 5.2
Searched_HMMs 29240
Date Mon Mar 25 11:05:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020055.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020055hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1jhn_A Calnexin; jelly-roll, b 100.0 4E-119 1E-123 884.6 21.2 317 12-329 19-395 (424)
2 3rg0_A Calreticulin; beta-sand 100.0 5E-113 2E-117 819.7 19.6 282 14-329 2-286 (332)
3 3pow_A Calreticulin; legume le 100.0 4.9E-83 1.7E-87 599.3 16.0 222 11-330 4-228 (265)
4 1hhn_A Calreticulin; molecular 100.0 1.1E-41 3.8E-46 278.3 6.2 101 203-304 1-101 (101)
5 1hhn_A Calreticulin; molecular 99.9 2.8E-27 9.7E-32 193.2 6.9 87 189-287 6-98 (101)
6 1jhn_A Calnexin; jelly-roll, b 99.9 1.5E-26 5.2E-31 228.0 8.9 108 189-296 252-376 (424)
7 3rg0_A Calreticulin; beta-sand 99.7 4.4E-18 1.5E-22 163.4 3.5 203 63-309 33-252 (332)
8 3ici_C Calnexin, PP90; protein 99.4 5.1E-14 1.7E-18 95.5 3.5 33 237-269 6-38 (38)
9 3ici_C Calnexin, PP90; protein 98.5 7.5E-08 2.6E-12 65.3 2.8 29 217-245 4-38 (38)
10 4b1m_A Levanase; hydrolase, CB 64.3 67 0.0023 27.3 11.3 91 87-190 64-155 (185)
11 3zyp_A CIP1; metal binding pro 23.7 3.5E+02 0.012 23.2 12.9 79 22-104 3-82 (218)
12 2kbg_A N-CAM 2, neural cell ad 22.5 1.2E+02 0.0042 23.7 5.0 61 122-185 20-82 (114)
No 1
>1jhn_A Calnexin; jelly-roll, beta sandwich, chaperone; 2.90A {Canis lupus familiaris} SCOP: b.29.1.12 b.104.1.1
Probab=100.00 E-value=4.3e-119 Score=884.64 Aligned_cols=317 Identities=40% Similarity=0.775 Sum_probs=284.6
Q ss_pred hhhcceeeeEEecCCCccCCCeEecccccCC------CCCccEEEeccccCCCCCCcceeeccccchhhhhccCCC-cCC
Q 020055 12 FQISVSEIFFEERFDDGWRSRWVISDWKRSE------GKAGYFKHTAGKWHGDPDDKGIQTHTDARHYAISAKIPE-FSN 84 (332)
Q Consensus 12 ~~~~~~~~~F~E~Fd~~~~~rWi~S~~~k~~------~~~G~w~~~~g~~~~~~~DkGLv~~~~ak~yaIs~~l~~-~~~ 84 (332)
..++++++||+|+|+++|++|||+|+++|++ .|.|+|++++|++++.++|+||||+++|||||||++|++ |++
T Consensus 19 ~p~~~~~~~F~E~F~~~~~~rWv~S~~~k~~~~~~~~~y~G~w~~~~~~~~~~~~DkGL~~~~~ar~yaISa~~~kpf~~ 98 (424)
T 1jhn_A 19 APVPSGEVYFADSFDRGTLSGWILSKAKKDDTDDEIAKYDGKWEVDEMKETKLPGDKGLVLMSRAKHHAISAKLNKPFLF 98 (424)
T ss_dssp CCCCCSCCSSEECCCSSSCCSCCCCCCC-----------CCEEECCBCTTCSSTTCBCCEEECSSCCCEEEEEEEEEECS
T ss_pred cCCCCcceeEeeecCCCccCCceeCcccccccccccccCCeEEEEecCccCCCccccceeeccchhHHHHHHhhcCcccc
Confidence 4466799999999999999999999998763 367999999999999999999999999999999999998 999
Q ss_pred CCCceEEEEEEeeeceeecCCceEEEcccc--cccccccCCCCeeEEEccCccCCCCceEEEEEEeCCCc-------ccc
Q 020055 85 KNRTLVVQYSIRFEQDIECGGGYIKLLSAY--VNQKKFGGDAPYSLMFGPDICGTQKKHLHVILSYQGQN-------YPI 155 (332)
Q Consensus 85 ~~k~LVvQYEVK~q~~i~CGGaYIKLl~~~--~d~~~f~~~TpY~IMFGPD~CG~~~~kvHfI~~~~~~~-------~~~ 155 (332)
++++||||||||||++|+|||||||||+.. +++++|+++|||+||||||+|| .++||||||||+|.+ |..
T Consensus 99 ~~k~LVvQYeVk~q~~idCGGaYiKLl~~~~~~d~~~f~~~TpY~IMFGPD~CG-~~~kvH~I~~~knp~~g~~~ekh~~ 177 (424)
T 1jhn_A 99 DTKPLIVQYEVNFQNGIECGGAYVKLLSKTPELNLDQFHDKTPYTIMFGPDKCG-EDYKLHFIFRHKNPKTGVYEEKHAK 177 (424)
T ss_dssp SSSCEEEEEEECCTTCCSEEECCEEEEBCCSSCCGGGCCSSCCEEEEEEEEEES-SCCEEEEEEEEECTTTCCEEEECCC
T ss_pred CCCCEEEEEEEEecccccccceEEEeecCcccCCHhHcCCCCCceEeccCCccC-CCCeEEEEEecCCCCCCchhhhccc
Confidence 999999999999999999999999999974 7899999999999999999999 799999999998743 444
Q ss_pred ccCC---cccccccCceEEEEECCCCceEEEECCeeecCCCCccCCc--cCCccccccCCCCCCCCcccccccCCCCCCC
Q 020055 156 KKEL---ECETDKLTHFYTFILRPDASYSILIDNRERDSGSMYTDWD--ILPPRKIKAVNAKKPADWDDREYIDDPNAVK 230 (332)
Q Consensus 156 ~~~~---~~~~d~~tHlYTLii~~d~tyei~iD~~~~~~g~l~~d~~--~~~p~~I~Dp~~~KP~DW~d~~~I~Dp~a~K 230 (332)
++.. .|.+|++||||||||||||||+|+|||+++.+|||++||+ ++||++|+||+++||+|||++++|+||+|+|
T Consensus 178 ~~~~~~~~~~~D~~tHlYTLIl~pdntyei~ID~~~v~~GsL~~D~~Pp~~pp~~I~Dp~~~KP~DWde~~~I~Dp~a~K 257 (424)
T 1jhn_A 178 RPDADLKTYFTDKKTHLYTLILNPDNSFEILVDQSIVNSGNLLNDMTPPVNPSREIEDPEDQKPEDWDERPKIPDPDAVK 257 (424)
T ss_dssp CCSSCCTHHHHSCSCEEEEEEEETTTEEEEEETTEEEEEEC-------CCSSCCCCBCTTCCCCTTCCCCSEEECSSCCC
T ss_pred CCcccccccccCCCceEEEEEEcCCCcEEEEECCceecccccHHhccccCCCcccccCccccCccccccccccCCcccCC
Confidence 5454 3568999999999999999999999999999999999999 9999999999999999999999999999999
Q ss_pred CCCCCC--------------------CCCCCCCCCCCCCCCCCCCCCCCCC-------------------CCCCCCCCCC
Q 020055 231 PEGYDS--------------------IPKEIPDPKAKKPDNWDEDEDGLWK-------------------PPKIPNPAYK 271 (332)
Q Consensus 231 P~dWdd--------------------~~~~I~dP~~~kP~dwd~~~~G~W~-------------------~p~I~nP~yk 271 (332)
|+|||+ +|++|+||+|+||+|||+++||+|+ ||||.||+||
T Consensus 258 PeDWde~~p~~I~Dp~A~KPedWdd~ep~~I~DP~a~KPedWd~~~~G~W~~P~i~NP~~~~~~gcG~W~~P~I~NP~yk 337 (424)
T 1jhn_A 258 PDDWNEDAPAKIPDEEATKPDGWLDDEPEYVPDPDAEKPEDWDEDMDGEWEAPQIANPKCESAPGCGVWQRPMIDNPNYK 337 (424)
T ss_dssp CTTCCSSCCSEEECTTCCCCSSCBSSSCSCCBCTTCCCCTTCCTTTSCCCCCCBCCCGGGTTSSCBSSCCCCEEECTTCC
T ss_pred ccccccCCccccCCccccCCCCccccccccCCCcccCCccccccCCCccccCcccCCchhcccccCCcccCCCCCCcccc
Confidence 999973 4779999999999999998877776 5777788889
Q ss_pred cccccCcCCCCCCCCcccccccCCCCCCCCCCCCCcCCceEEEEEeeeecCCceecCC
Q 020055 272 GPWRPKRIKNPNYKGKWKIPYIDNPEFEDDPDLYVLKPIKYVGIEVWQITWLSAGQGG 329 (332)
Q Consensus 272 G~W~~~~I~NP~Y~g~W~p~~i~NP~y~~d~~~~~~~~i~~ig~elW~~~~g~if~~~ 329 (332)
|+|+||+|+||+|+|+|+||+|+||+|++|.+|++|.+|++||||||||++||||+|-
T Consensus 338 G~W~pp~I~NP~Ykg~W~p~~I~NP~y~~d~~p~~~~~i~~iG~ElW~~~~g~~FDNi 395 (424)
T 1jhn_A 338 GKWKPPMIDNPNYQGIWKPRKIPNPDFFEDLEPFKMTPFSAIGLELWSMTSDIFFDNF 395 (424)
T ss_dssp CSCCCCEEECTTCCCSCCCCBCCCTTCCCCCCTTCCCCEEEEEECCCCSSSCCBCEEE
T ss_pred CcccCCccCCCcccccccccccCCccccCCCcccccCcccEEEEEeEEeeCCcEEeeE
Confidence 9999999999999999999999999999999999999999999999999999999984
No 2
>3rg0_A Calreticulin; beta-sandwich, chaperone, monoglucosylated proteins binding, carbohydrate binding, calcium binding, endoplasmic reticulu; 2.57A {Mus musculus}
Probab=100.00 E-value=4.6e-113 Score=819.66 Aligned_cols=282 Identities=47% Similarity=0.922 Sum_probs=242.3
Q ss_pred hcceeeeEEecCCC--ccCCCeEecccccCCCCCccEEEeccccCCC-CCCcceeeccccchhhhhccCCCcCCCCCceE
Q 020055 14 ISVSEIFFEERFDD--GWRSRWVISDWKRSEGKAGYFKHTAGKWHGD-PDDKGIQTHTDARHYAISAKIPEFSNKNRTLV 90 (332)
Q Consensus 14 ~~~~~~~F~E~Fd~--~~~~rWi~S~~~k~~~~~G~w~~~~g~~~~~-~~DkGLv~~~~ak~yaIs~~l~~~~~~~k~LV 90 (332)
++.+++||.|+|++ +|++|||+|++++ ..|+|++++|+++++ ++|+||||+++|||||||++|+.|++++++||
T Consensus 2 ~~~~~vyF~E~F~d~~~w~~rWv~S~~~~---~~G~w~~~~g~~~~~~~~DkGL~t~~~ak~yAISakf~pf~n~~k~LV 78 (332)
T 3rg0_A 2 SMDPAIYFKEQFLDGDAWTNRWVESKHKS---DFGKFVLSSGKFYGDLEKDKGLQTSQDARFYALSAKFEPFSNKGQTLV 78 (332)
T ss_dssp --CCCEEEEECCCSGGGGGGTEEECCSSS---SCCCEEEECCSSCSSTTTTCEEEECSSSEEEEEEEEEEEECCTTSCEE
T ss_pred CcceEEEEEeecCCCCcccCCceeCCCcc---cCCeEEeecCcccCCcccccceeecchhhhhhhhcccCCccCCCCCEE
Confidence 35789999999997 5999999999864 369999999999987 57999999999999999999933999999999
Q ss_pred EEEEEeeeceeecCCceEEEcccccccccccCCCCeeEEEccCccCCCCceEEEEEEeCCCccccccCCcccccccCceE
Q 020055 91 VQYSIRFEQDIECGGGYIKLLSAYVNQKKFGGDAPYSLMFGPDICGTQKKHLHVILSYQGQNYPIKKELECETDKLTHFY 170 (332)
Q Consensus 91 vQYEVK~q~~i~CGGaYIKLl~~~~d~~~f~~~TpY~IMFGPD~CG~~~~kvHfI~~~~~~~~~~~~~~~~~~d~~tHlY 170 (332)
||||||+|++|+|||||||||+..+++++|+++|||+||||||+||++++||||||||++++|.++++++|..|++||||
T Consensus 79 vQYeVK~e~~idCGGaYiKLl~~~~d~~~f~~~TpY~IMFGPD~CG~~~~kvH~I~~~k~~~h~~kk~i~~~~D~~THLY 158 (332)
T 3rg0_A 79 VQFTVKHEQNIDCGGGYVKLFPSGLDQKDMHGDSEYNIMFGPDICGPGTKKVHVIFNYKGKNVLINKDIRSKDDEFTHLY 158 (332)
T ss_dssp EEEEEEETTCCSEEECCEEEECSSCCGGGCCTTSCCSEEEEEEEETTTEEEEEEEEEETTEEEECSSCCBCCCSSSEEEE
T ss_pred EEEEEEcccccccCceEEEeecCcCCHhhcCCCCcceEEecCcccCCCCCEEEEEEEeCCccccccCCCCCCCCCCCceE
Confidence 99999999999999999999999899999999999999999999997799999999999999999999999999999999
Q ss_pred EEEECCCCceEEEECCeeecCCCCccCCccCCccccccCCCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 020055 171 TFILRPDASYSILIDNRERDSGSMYTDWDILPPRKIKAVNAKKPADWDDREYIDDPNAVKPEGYDSIPKEIPDPKAKKPD 250 (332)
Q Consensus 171 TLii~~d~tyei~iD~~~~~~g~l~~d~~~~~p~~I~Dp~~~KP~DW~d~~~I~Dp~a~KP~dWdd~~~~I~dP~~~kP~ 250 (332)
||||+|||||+|+|||+++.+|+|++||+++||++|+||+|+||+||||+++|+||+|+||+|||+
T Consensus 159 TLIi~pdntyeI~ID~~~v~~GsL~~Dwd~~ppk~I~Dp~d~KPedWdd~~~I~DP~a~KPeDWd~-------------- 224 (332)
T 3rg0_A 159 TLIVRPDNTYEVKIDNSQVESGSLEDDWDFLPPKKIKDPDAAKPEDWDERAKIDDPTDSKPEDWDK-------------- 224 (332)
T ss_dssp EEEECTTSEEEEEETTEEEEEEEHHHHSCCSCCSEEECTTCCCCTTCCCCCCCC--------------------------
T ss_pred EEEEcCCCeEEEEECCEEEecccccCCCCcCCccccCCcccCCcccCcCcccCCCcccCCcccccc--------------
Confidence 999999999999999999999999999999999999999999999999999999999999999984
Q ss_pred CCCCCCCCCCCCCCCCCCCCCcccccCcCCCCCCCCcccccccCCCCCCCCCCCCCcCCceEEEEEeeeecCCceecCC
Q 020055 251 NWDEDEDGLWKPPKIPNPAYKGPWRPKRIKNPNYKGKWKIPYIDNPEFEDDPDLYVLKPIKYVGIEVWQITWLSAGQGG 329 (332)
Q Consensus 251 dwd~~~~G~W~~p~I~nP~ykG~W~~~~I~NP~Y~g~W~p~~i~NP~y~~d~~~~~~~~i~~ig~elW~~~~g~if~~~ 329 (332)
|+|||+|+||+|+||+|+|+|+||+|+||+|++|++|++|++|++||||||||++||||||-
T Consensus 225 -----------------p~YkG~Wkp~~I~NP~YkG~W~p~~I~NP~Y~~D~~~~~~~~i~~iG~ElWq~~sg~iFDNi 286 (332)
T 3rg0_A 225 -----------------GGSGGEWKPRQIDNPDYKGTWIHPEIDNPEYSPDANIYAYDSFAVLGLDLWQVKSGTIFDNF 286 (332)
T ss_dssp ---------------------------------CCCCCCCCEEECTTCCCCTTTTCCSCEEEEEEEEEESSCCEEEEEE
T ss_pred -----------------ccccccccccccCCCcccCCccCCccCCCCCcCCcchhccccccEEEEEEEeccCCcEEeeE
Confidence 23999999999999999999999999999999999999999999999999999999999984
No 3
>3pow_A Calreticulin; legume lectin fold, CNX/CRT family, multi-functional, carboh binding, peptide binding, multi-compartmental, chaperone; 1.55A {Homo sapiens} PDB: 3pos_A 3o0w_A* 3o0v_A* 3o0x_A*
Probab=100.00 E-value=4.9e-83 Score=599.27 Aligned_cols=222 Identities=44% Similarity=0.871 Sum_probs=201.6
Q ss_pred HhhhcceeeeEEecCCC--ccCCCeEecccccCCCCCccEEEeccccCCC-CCCcceeeccccchhhhhccCCCcCCCCC
Q 020055 11 FFQISVSEIFFEERFDD--GWRSRWVISDWKRSEGKAGYFKHTAGKWHGD-PDDKGIQTHTDARHYAISAKIPEFSNKNR 87 (332)
Q Consensus 11 ~~~~~~~~~~F~E~Fd~--~~~~rWi~S~~~k~~~~~G~w~~~~g~~~~~-~~DkGLv~~~~ak~yaIs~~l~~~~~~~k 87 (332)
.|+++.+++||.|+|++ +|++|||+|++++ +.|+|++++|+|+++ ++|+||||+++|||||||++|+.|+++++
T Consensus 4 ~~~~~~~~v~F~E~Fdd~~~w~~rWv~S~~kk---~~G~w~~~~g~~~~~~~~DkGL~t~~~Ak~yaISakl~pf~~~~k 80 (265)
T 3pow_A 4 SIEGREPAVYFKEQFLDGDGWTSRWIESKHKS---DFGKFVLSSGKFYGDEEKDKGLQTSQDARFYALSASFEPFSNKGQ 80 (265)
T ss_dssp ---CCCCSEEEEECCCSGGGGGGTEEECCSSS---CCCCEEEECCSSCSCTTTTCEEEECSSSEEEEEEEEEEEECCTTS
T ss_pred ceeeeeeeEEEEeecCCCCcccCCeeeCCCcC---cCCeEEeecccccCCcccccceeecchhhhhhhhcccCCccCCCC
Confidence 36677899999999996 6999999999875 369999999999887 57999999999999999999933999999
Q ss_pred ceEEEEEEeeeceeecCCceEEEcccccccccccCCCCeeEEEccCccCCCCceEEEEEEeCCCccccccCCcccccccC
Q 020055 88 TLVVQYSIRFEQDIECGGGYIKLLSAYVNQKKFGGDAPYSLMFGPDICGTQKKHLHVILSYQGQNYPIKKELECETDKLT 167 (332)
Q Consensus 88 ~LVvQYEVK~q~~i~CGGaYIKLl~~~~d~~~f~~~TpY~IMFGPD~CG~~~~kvHfI~~~~~~~~~~~~~~~~~~d~~t 167 (332)
+||||||||+|++|+|||||||||+.++++++|+++|||+||||||+||++++||||||||++++|.++++++|..|++|
T Consensus 81 ~LVvQYeVk~q~~idCGGaYiKLl~~~~~~~~f~~~tpY~IMFGPD~CG~~~~kvHfI~~~k~~~h~~~~~~~~~~D~~t 160 (265)
T 3pow_A 81 TLVVQFTVKHEQNIDCGGGYVKLFPNSLDQTDMHGDSEYNIMFGPDICGPGTKKVHVIFNYKGKNVLINKDIRCKDDEFT 160 (265)
T ss_dssp CEEEEEEEECTTCCSEEECCEEEECTTCCGGGCCTTSCCSEEEEEEEESTTCEEEEEEEEETTEEEECSSCCBCCCSSSE
T ss_pred CEEEEEEEEeccccccCceEEEeecCCCCHhhcCCCCCceEEecCcccCCCCCEEEEEEEcCCccccccCCCCCCCCCCC
Confidence 99999999999999999999999999899999999999999999999997699999999999999999999999999999
Q ss_pred ceEEEEECCCCceEEEECCeeecCCCCccCCccCCccccccCCCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCC
Q 020055 168 HFYTFILRPDASYSILIDNRERDSGSMYTDWDILPPRKIKAVNAKKPADWDDREYIDDPNAVKPEGYDSIPKEIPDPKAK 247 (332)
Q Consensus 168 HlYTLii~~d~tyei~iD~~~~~~g~l~~d~~~~~p~~I~Dp~~~KP~DW~d~~~I~Dp~a~KP~dWdd~~~~I~dP~~~ 247 (332)
|||||||+|||||||+|||+++.+|+|.+||+++||
T Consensus 161 HLYTLIi~pdntyeI~ID~~~v~~GsL~~d~df~Pp-------------------------------------------- 196 (265)
T 3pow_A 161 HLYTLIVRPDNTYEVKIDNSQVESGSLEDDWDFLPG-------------------------------------------- 196 (265)
T ss_dssp EEEEEEECTTSEEEEEETTEEEEEEEHHHHSCC-----------------------------------------------
T ss_pred ceEEEEEcCCCeEEEEECCEEeeeccccCccccCCC--------------------------------------------
Confidence 999999999999999999999999999999999887
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCcccccCcCCCCCCCCcccccccCCCCCCCCCCCCCcCCceEEEEEeeeecCCceec
Q 020055 248 KPDNWDEDEDGLWKPPKIPNPAYKGPWRPKRIKNPNYKGKWKIPYIDNPEFEDDPDLYVLKPIKYVGIEVWQITWLSAGQ 327 (332)
Q Consensus 248 kP~dwd~~~~G~W~~p~I~nP~ykG~W~~~~I~NP~Y~g~W~p~~i~NP~y~~d~~~~~~~~i~~ig~elW~~~~g~if~ 327 (332)
.+|++++++.+|++||||||||+||||||
T Consensus 197 ---------------------------------------------------~~d~~ly~~~~i~~vGldlWQvksGtiFD 225 (265)
T 3pow_A 197 ---------------------------------------------------SGDPSIYAYDNFGVLGLDLWQVKSGTIFD 225 (265)
T ss_dssp -------------------------------------------------------CTTCCSCEEEEEEEEEESSCCCEEE
T ss_pred ---------------------------------------------------CCCccccccccccEEEEEEEEecCCeEec
Confidence 44667789999999999999999999999
Q ss_pred CCc
Q 020055 328 GGF 330 (332)
Q Consensus 328 ~~~ 330 (332)
|-+
T Consensus 226 NiL 228 (265)
T 3pow_A 226 NFL 228 (265)
T ss_dssp EEE
T ss_pred cEE
Confidence 853
No 4
>1hhn_A Calreticulin; molecular chaperone; NMR {Rattus norvegicus} SCOP: b.104.1.1 PDB: 1k9c_A 1k91_A
Probab=100.00 E-value=1.1e-41 Score=278.27 Aligned_cols=101 Identities=56% Similarity=1.201 Sum_probs=98.0
Q ss_pred ccccccCCCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCcCCCC
Q 020055 203 PRKIKAVNAKKPADWDDREYIDDPNAVKPEGYDSIPKEIPDPKAKKPDNWDEDEDGLWKPPKIPNPAYKGPWRPKRIKNP 282 (332)
Q Consensus 203 p~~I~Dp~~~KP~DW~d~~~I~Dp~a~KP~dWdd~~~~I~dP~~~kP~dwd~~~~G~W~~p~I~nP~ykG~W~~~~I~NP 282 (332)
|++|+||+++||+||+++++|+||+|+||+|||+ +++|+||+|+||++||++++|+|++|||.||+|+|+|+|+||+||
T Consensus 1 p~~I~Dp~~~KPeDWd~~~~I~DP~a~KPeDWde-~~~I~dP~~~kP~dWd~~~~G~W~~p~I~NP~ykG~W~pp~I~NP 79 (101)
T 1hhn_A 1 SKKIKDPDAAKPEDWDERAKIDDPTDSKPEDWDK-PEHIPDPDAKKPEDWDEEMDGEWEPPVIQNPEYKGEWKPRQIDNP 79 (101)
T ss_dssp CCSBCCSTTCCCSCCSTTSEECCSSCCCCSTTCC-CSEEECTTCCCCTTCCHHHHSSCCCCEEECTTCCSSCCCCCEECS
T ss_pred CcccCCcccCCccccccccccCCcccCCccCccc-cccCCCcccCCccccCcccCCcccCCcCCCccCcCcccCCccCCC
Confidence 5899999999999999999999999999999998 899999999999999999999999999999999999999999999
Q ss_pred CCCCcccccccCCCCCCCCCCC
Q 020055 283 NYKGKWKIPYIDNPEFEDDPDL 304 (332)
Q Consensus 283 ~Y~g~W~p~~i~NP~y~~d~~~ 304 (332)
+|+|.|+|++|+||+|++|.++
T Consensus 80 ~Ykg~W~p~~I~NP~y~~d~~~ 101 (101)
T 1hhn_A 80 DYKGTWIHPEIDNPEYSPDANI 101 (101)
T ss_dssp SCCCCCCCCCBCCTTCCSSSCC
T ss_pred CCCCCccCCccCCCCccCCCCC
Confidence 9999999999999999998753
No 5
>1hhn_A Calreticulin; molecular chaperone; NMR {Rattus norvegicus} SCOP: b.104.1.1 PDB: 1k9c_A 1k91_A
Probab=99.94 E-value=2.8e-27 Score=193.22 Aligned_cols=87 Identities=43% Similarity=0.806 Sum_probs=80.7
Q ss_pred ecCCCCccCCccCCccccccCCCCCCCCcccccccCCCCCCCCCCCCC------CCCCCCCCCCCCCCCCCCCCCCCCCC
Q 020055 189 RDSGSMYTDWDILPPRKIKAVNAKKPADWDDREYIDDPNAVKPEGYDS------IPKEIPDPKAKKPDNWDEDEDGLWKP 262 (332)
Q Consensus 189 ~~~g~l~~d~~~~~p~~I~Dp~~~KP~DW~d~~~I~Dp~a~KP~dWdd------~~~~I~dP~~~kP~dwd~~~~G~W~~ 262 (332)
..+..+++||+. +++|+||+++||+||+++++|+||+++||+||++ ++++|+||++ +|+|+|
T Consensus 6 Dp~~~KPeDWd~--~~~I~DP~a~KPeDWde~~~I~dP~~~kP~dWd~~~~G~W~~p~I~NP~y----------kG~W~p 73 (101)
T 1hhn_A 6 DPDAAKPEDWDE--RAKIDDPTDSKPEDWDKPEHIPDPDAKKPEDWDEEMDGEWEPPVIQNPEY----------KGEWKP 73 (101)
T ss_dssp CSTTCCCSCCST--TSEECCSSCCCCSTTCCCSEEECTTCCCCTTCCHHHHSSCCCCEEECTTC----------CSSCCC
T ss_pred CcccCCcccccc--ccccCCcccCCccCccccccCCCcccCCccccCcccCCcccCCcCCCccC----------cCcccC
Confidence 346778999996 6899999999999999999999999999999997 4889999987 799999
Q ss_pred CCCCCCCCCcccccCcCCCCCCCCc
Q 020055 263 PKIPNPAYKGPWRPKRIKNPNYKGK 287 (332)
Q Consensus 263 p~I~nP~ykG~W~~~~I~NP~Y~g~ 287 (332)
+||+||+|+|+|+|++|+||+|++.
T Consensus 74 p~I~NP~Ykg~W~p~~I~NP~y~~d 98 (101)
T 1hhn_A 74 RQIDNPDYKGTWIHPEIDNPEYSPD 98 (101)
T ss_dssp CCEECSSCCCCCCCCCBCCTTCCSS
T ss_pred CccCCCCCCCCccCCccCCCCccCC
Confidence 9999999999999999999999986
No 6
>1jhn_A Calnexin; jelly-roll, beta sandwich, chaperone; 2.90A {Canis lupus familiaris} SCOP: b.29.1.12 b.104.1.1
Probab=99.93 E-value=1.5e-26 Score=228.00 Aligned_cols=108 Identities=35% Similarity=0.685 Sum_probs=98.9
Q ss_pred ecCCCCccCCccCCccccccCCCCCCCCccccc--ccCCCCCCCCCCCCC------CCCCCCCCCCC---------CCCC
Q 020055 189 RDSGSMYTDWDILPPRKIKAVNAKKPADWDDRE--YIDDPNAVKPEGYDS------IPKEIPDPKAK---------KPDN 251 (332)
Q Consensus 189 ~~~g~l~~d~~~~~p~~I~Dp~~~KP~DW~d~~--~I~Dp~a~KP~dWdd------~~~~I~dP~~~---------kP~d 251 (332)
.....+++||+..+|++|+||++.||+||++.+ +|+||+|+||+|||+ ++++|+||+|+ +|..
T Consensus 252 Dp~a~KPeDWde~~p~~I~Dp~A~KPedWdd~ep~~I~DP~a~KPedWd~~~~G~W~~P~i~NP~~~~~~gcG~W~~P~I 331 (424)
T 1jhn_A 252 DPDAVKPDDWNEDAPAKIPDEEATKPDGWLDDEPEYVPDPDAEKPEDWDEDMDGEWEAPQIANPKCESAPGCGVWQRPMI 331 (424)
T ss_dssp CSSCCCCTTCCSSCCSEEECTTCCCCSSCBSSSCSCCBCTTCCCCTTCCTTTSCCCCCCBCCCGGGTTSSCBSSCCCCEE
T ss_pred CcccCCccccccCCccccCCccccCCCCccccccccCCCcccCCccccccCCCccccCcccCCchhcccccCCcccCCCC
Confidence 356788999999899999999999999998765 999999999999997 48999999998 6999
Q ss_pred CCCCCCCCCCCCCCCCCCCCcccccCcCCCCCCCCcccccccCCC
Q 020055 252 WDEDEDGLWKPPKIPNPAYKGPWRPKRIKNPNYKGKWKIPYIDNP 296 (332)
Q Consensus 252 wd~~~~G~W~~p~I~nP~ykG~W~~~~I~NP~Y~g~W~p~~i~NP 296 (332)
+|..++|+|+||+|+||+|+|+|+|++|+||+|+++..|..+.+=
T Consensus 332 ~NP~ykG~W~pp~I~NP~Ykg~W~p~~I~NP~y~~d~~p~~~~~i 376 (424)
T 1jhn_A 332 DNPNYKGKWKPPMIDNPNYQGIWKPRKIPNPDFFEDLEPFKMTPF 376 (424)
T ss_dssp ECTTCCCSCCCCEEECTTCCCSCCCCBCCCTTCCCCCCTTCCCCE
T ss_pred CCccccCcccCCccCCCcccccccccccCCccccCCCcccccCcc
Confidence 999999999999999999999999999999999999988766443
No 7
>3rg0_A Calreticulin; beta-sandwich, chaperone, monoglucosylated proteins binding, carbohydrate binding, calcium binding, endoplasmic reticulu; 2.57A {Mus musculus}
Probab=99.69 E-value=4.4e-18 Score=163.41 Aligned_cols=203 Identities=24% Similarity=0.398 Sum_probs=109.7
Q ss_pred ceeeccccchhhhhccCCC-cCCCCCceEEEEEEeeeceeecCCc-eEEEcccccccccccCCCCeeEEEccCccCCCCc
Q 020055 63 GIQTHTDARHYAISAKIPE-FSNKNRTLVVQYSIRFEQDIECGGG-YIKLLSAYVNQKKFGGDAPYSLMFGPDICGTQKK 140 (332)
Q Consensus 63 GLv~~~~ak~yaIs~~l~~-~~~~~k~LVvQYEVK~q~~i~CGGa-YIKLl~~~~d~~~f~~~TpY~IMFGPD~CG~~~~ 140 (332)
|-...+.+++|+-... ++ +.++.+.--...+.|| +.++-.|. .|-+++..+.+ ...|...|.-+|.-+.-. .
T Consensus 33 G~w~~~~g~~~~~~~~-DkGL~t~~~ak~yAISakf-~pf~n~~k~LVvQYeVK~e~-~idCGGaYiKLl~~~~d~---~ 106 (332)
T 3rg0_A 33 GKFVLSSGKFYGDLEK-DKGLQTSQDARFYALSAKF-EPFSNKGQTLVVQFTVKHEQ-NIDCGGGYVKLFPSGLDQ---K 106 (332)
T ss_dssp CCEEEECCSSCSSTTT-TCEEEECSSSEEEEEEEEE-EEECCTTSCEEEEEEEEETT-CCSEEECCEEEECSSCCG---G
T ss_pred CeEEeecCcccCCccc-ccceeecchhhhhhhhccc-CCccCCCCCEEEEEEEEccc-ccccCceEEEeecCcCCH---h
Confidence 4444445777765554 55 7777777777888888 67887665 47777766654 468899999999965421 1
Q ss_pred eEEEEEEeCC-Cccccc-cCCcccc-cccCceEEEEEC-CCCceEEE--ECCeeecCCCCccCCccCCcc----cccc--
Q 020055 141 HLHVILSYQG-QNYPIK-KELECET-DKLTHFYTFILR-PDASYSIL--IDNRERDSGSMYTDWDILPPR----KIKA-- 208 (332)
Q Consensus 141 kvHfI~~~~~-~~~~~~-~~~~~~~-d~~tHlYTLii~-~d~tyei~--iD~~~~~~g~l~~d~~~~~p~----~I~D-- 208 (332)
.+++ +.|.|. .+-.|.. +++.| +|++ .+..+.++ |.........|++-- +.|-. .|+.
T Consensus 107 ------~f~~~TpY~IMFGPD~CG~~~~kvH---~I~~~k~~~h~~kk~i~~~~D~~THLYTLI-i~pdntyeI~ID~~~ 176 (332)
T 3rg0_A 107 ------DMHGDSEYNIMFGPDICGPGTKKVH---VIFNYKGKNVLINKDIRSKDDEFTHLYTLI-VRPDNTYEVKIDNSQ 176 (332)
T ss_dssp ------GCCTTSCCSEEEEEEEETTTEEEEE---EEEEETTEEEECSSCCBCCCSSSEEEEEEE-ECTTSEEEEEETTEE
T ss_pred ------hcCCCCcceEEecCcccCCCCCEEE---EEEEeCCccccccCCCCCCCCCCCceEEEE-EcCCCeEEEEECCEE
Confidence 1232 456664 2336886 68889 4554 44333332 222222222222211 11111 2222
Q ss_pred -CCCCCCCCccc--ccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCcCCCCCCC
Q 020055 209 -VNAKKPADWDD--REYIDDPNAVKPEGYDSIPKEIPDPKAKKPDNWDEDEDGLWKPPKIPNPAYKGPWRPKRIKNPNYK 285 (332)
Q Consensus 209 -p~~~KP~DW~d--~~~I~Dp~a~KP~dWdd~~~~I~dP~~~kP~dwd~~~~G~W~~p~I~nP~ykG~W~~~~I~NP~Y~ 285 (332)
-+...++||+. +++|+||+|+||+|||| +++|+||+|+||+ .|- ||+|+
T Consensus 177 v~~GsL~~Dwd~~ppk~I~Dp~d~KPedWdd-~~~I~DP~a~KPe----------------------DWd-----~p~Yk 228 (332)
T 3rg0_A 177 VESGSLEDDWDFLPPKKIKDPDAAKPEDWDE-RAKIDDPTDSKPE----------------------DWD-----KGGSG 228 (332)
T ss_dssp EEEEEHHHHSCCSCCSEEECTTCCCCTTCCC-CCCCC-------------------------------------------
T ss_pred EecccccCCCCcCCccccCCcccCCcccCcC-cccCCCcccCCcc----------------------ccc-----ccccc
Confidence 13567899997 57999999999999998 8999999999986 364 79999
Q ss_pred CcccccccCCCCCCCCCCCCCcCC
Q 020055 286 GKWKIPYIDNPEFEDDPDLYVLKP 309 (332)
Q Consensus 286 g~W~p~~i~NP~y~~d~~~~~~~~ 309 (332)
|+|+||+|+||+|++...|..+.+
T Consensus 229 G~Wkp~~I~NP~YkG~W~p~~I~N 252 (332)
T 3rg0_A 229 GEWKPRQIDNPDYKGTWIHPEIDN 252 (332)
T ss_dssp ------------CCCCCCCCEEEC
T ss_pred ccccccccCCCcccCCccCCccCC
Confidence 999999999999999988776543
No 8
>3ici_C Calnexin, PP90; protein-protein complex, endoplasmic reticulum, glycoprotein isomerase, rotamase, chaperone, lectin, membrane; HET: MES; 1.70A {Canis lupus familiaris}
Probab=99.43 E-value=5.1e-14 Score=95.54 Aligned_cols=33 Identities=64% Similarity=1.267 Sum_probs=31.4
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 020055 237 IPKEIPDPKAKKPDNWDEDEDGLWKPPKIPNPA 269 (332)
Q Consensus 237 ~~~~I~dP~~~kP~dwd~~~~G~W~~p~I~nP~ 269 (332)
+|++|+||+|+||+|||+++||+|+||||+||+
T Consensus 6 ep~~IpDP~a~KP~DWdde~DGeWe~P~I~NPk 38 (38)
T 3ici_C 6 EPKFIPDPNAEKPDDWNEDMDGEWEAPRISNPA 38 (38)
T ss_pred ccccccCCCCCCCCCcCcCcCCcccCCcCCCcC
Confidence 599999999999999999999999999999995
No 9
>3ici_C Calnexin, PP90; protein-protein complex, endoplasmic reticulum, glycoprotein isomerase, rotamase, chaperone, lectin, membrane; HET: MES; 1.70A {Canis lupus familiaris}
Probab=98.46 E-value=7.5e-08 Score=65.29 Aligned_cols=29 Identities=34% Similarity=0.724 Sum_probs=24.0
Q ss_pred cccccccCCCCCCCCCCCCC------CCCCCCCCC
Q 020055 217 WDDREYIDDPNAVKPEGYDS------IPKEIPDPK 245 (332)
Q Consensus 217 W~d~~~I~Dp~a~KP~dWdd------~~~~I~dP~ 245 (332)
++++++|+||+|+||+|||+ ++++|+||+
T Consensus 4 ~dep~~IpDP~a~KP~DWdde~DGeWe~P~I~NPk 38 (38)
T 3ici_C 4 MDEPKFIPDPNAEKPDDWNEDMDGEWEAPRISNPA 38 (38)
T ss_pred ccccccccCCCCCCCCCcCcCcCCcccCCcCCCcC
Confidence 55677888889999999886 589999985
No 10
>4b1m_A Levanase; hydrolase, CBM66; HET: FRU; 1.10A {Bacillus subtilis} PDB: 4b1l_A* 4azz_A
Probab=64.30 E-value=67 Score=27.32 Aligned_cols=91 Identities=10% Similarity=0.082 Sum_probs=46.8
Q ss_pred CceEEEEEEeeeceeecCCceEEEcccccccccccCCCCeeEEEccCccCCCCceEEEEEEe-CCCccccccCCcccccc
Q 020055 87 RTLVVQYSIRFEQDIECGGGYIKLLSAYVNQKKFGGDAPYSLMFGPDICGTQKKHLHVILSY-QGQNYPIKKELECETDK 165 (332)
Q Consensus 87 k~LVvQYEVK~q~~i~CGGaYIKLl~~~~d~~~f~~~TpY~IMFGPD~CG~~~~kvHfI~~~-~~~~~~~~~~~~~~~d~ 165 (332)
.+++|+-+||+..+-.+|-+-|- +.... +...-|.+.+.|.. +++.+ .+. ++....+...+......
T Consensus 64 ~Df~le~dvk~~~~~~~g~~Gi~-fR~~~-----d~~~gY~~~i~~~~-----~~~~l-~k~~~g~~~~L~~~~~~~~~g 131 (185)
T 4b1m_A 64 SDFTYESDITIKDGNGRGAGALM-FRSDK-----DAKNGYLANVDAKH-----DLVKF-FKFENGAASVIAEYKTPIDVN 131 (185)
T ss_dssp SSEEEEEEEEEEEEEEEEEEEEE-EEECT-----TSSSEEEEEEETTT-----TEEEE-EEEETTEEEEEEEEECCCCSS
T ss_pred cCEEEEEEEEEcCCCCcceEEEE-EEEcC-----CCCCcEEEEEECCC-----CEEEE-EEEeCCcEEEeeeccccCCCC
Confidence 67899999999874211212232 22211 12345888887742 33333 343 33223332221111223
Q ss_pred cCceEEEEECCCCceEEEECCeeec
Q 020055 166 LTHFYTFILRPDASYSILIDNRERD 190 (332)
Q Consensus 166 ~tHlYTLii~~d~tyei~iD~~~~~ 190 (332)
..|-++++.. .++.++.|||+.+.
T Consensus 132 ~w~~l~I~~~-G~~i~~~vnG~~v~ 155 (185)
T 4b1m_A 132 KKYHLKTEAE-GDRFKIYLDDRLVI 155 (185)
T ss_dssp CCEEEEEEEE-TTEEEEEETTEEEE
T ss_pred CeEEEEEEEE-CCEEEEEECCEEEE
Confidence 3343455554 67999999998754
No 11
>3zyp_A CIP1; metal binding protein, calcium-binding, CBM-containing, beta sandwich jelly roll, carbohydrate-binding; HET: NAG; 1.50A {Hypocrea jecorina}
Probab=23.68 E-value=3.5e+02 Score=23.19 Aligned_cols=79 Identities=13% Similarity=0.193 Sum_probs=46.8
Q ss_pred EecCCCc-cCCCeEecccccCCCCCccEEEeccccCCCCCCcceeeccccchhhhhccCCCcCCCCCceEEEEEEeeece
Q 020055 22 EERFDDG-WRSRWVISDWKRSEGKAGYFKHTAGKWHGDPDDKGIQTHTDARHYAISAKIPEFSNKNRTLVVQYSIRFEQD 100 (332)
Q Consensus 22 ~E~Fd~~-~~~rWi~S~~~k~~~~~G~w~~~~g~~~~~~~DkGLv~~~~ak~yaIs~~l~~~~~~~k~LVvQYEVK~q~~ 100 (332)
.|.|+.+ ...+|....+ +..-.|...+.... +..+.+.|.++..+.-|.-+..+.........+-+.|=||+...
T Consensus 3 sddFEsg~~~~~W~~~~~--~~~g~g~v~vdt~~--a~sG~~slrvt~~~~~~~~~~~~~~~~~~~~~~y~r~~v~~~~~ 78 (218)
T 3zyp_A 3 SDDFESGWDQTKWPISAP--DCNQGGTVSLDTTV--AHSGSNSMKVVGGPNGYCGHIFFGTTQVPTGDVYVRAWIRLQTA 78 (218)
T ss_dssp EECSTTCCCTTTSCEECS--SCCCSCEEEEESSS--CSSSSCEEEEECCSSGGGGCEEEEECCCCSSSEEEEEEEEESSC
T ss_pred ccccccCCCCCCceecCC--CCCCccEEEEcccc--ccCCceEEEEEccCCCccceEEeecccCCCceEEEEEEEEeccc
Confidence 5889988 4678986432 11224776666553 34566888876554333222222223344566889999999877
Q ss_pred eecC
Q 020055 101 IECG 104 (332)
Q Consensus 101 i~CG 104 (332)
+.=+
T Consensus 79 ~~~~ 82 (218)
T 3zyp_A 79 LGSN 82 (218)
T ss_dssp CCSS
T ss_pred CCCC
Confidence 6433
No 12
>2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens}
Probab=22.47 E-value=1.2e+02 Score=23.69 Aligned_cols=61 Identities=15% Similarity=0.158 Sum_probs=35.8
Q ss_pred CCCCeeEEEccCccCCCCceEEEEEEeCCCcc-ccccCCcccccccCceEEEE-ECCCCceEEEEC
Q 020055 122 GDAPYSLMFGPDICGTQKKHLHVILSYQGQNY-PIKKELECETDKLTHFYTFI-LRPDASYSILID 185 (332)
Q Consensus 122 ~~TpY~IMFGPD~CG~~~~kvHfI~~~~~~~~-~~~~~~~~~~d~~tHlYTLi-i~~d~tyei~iD 185 (332)
..+-++|..-|-.-| ..--.++++.|+.... ......... ....-|+|. |.|+..|++||=
T Consensus 20 ~~~sv~L~W~p~~dg-gsPI~~Y~I~yr~~~~~~w~~~~~~~--~~~~~~~l~~L~p~t~Y~frV~ 82 (114)
T 2kbg_A 20 SGKSFKLSITKQDDG-GAPILEYIVKYRSKDKEDQWLEKKVQ--GNKDHIILEHLQWTMGYEVQIT 82 (114)
T ss_dssp STTCEEEEECCCCCS-SSCCSEEEEEEEESSCCSCCEEEEEE--TTTCCEEECCCCTTCCEEEEEE
T ss_pred CCCEEEEEEECCCCC-CCcccEEEEEEEeCCCCCcEEeEEcC--CCcCEEEEcCCCCCCEEEEEEE
Confidence 344577777776656 5677888998864321 111111111 122336774 889999999975
Done!