Query 020056
Match_columns 331
No_of_seqs 145 out of 1179
Neff 7.9
Searched_HMMs 46136
Date Fri Mar 29 06:40:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020056.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020056hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03156 GDSL esterase/lipase; 100.0 2.7E-62 5.8E-67 466.5 28.6 266 39-323 26-301 (351)
2 cd01837 SGNH_plant_lipase_like 100.0 1.4E-60 3E-65 450.1 25.0 266 41-325 1-272 (315)
3 cd01847 Triacylglycerol_lipase 100.0 1.1E-49 2.4E-54 370.0 19.3 235 40-323 1-239 (281)
4 PRK15381 pathogenicity island 100.0 3.6E-49 7.7E-54 379.1 21.7 222 37-324 139-361 (408)
5 cd01846 fatty_acyltransferase_ 100.0 1.7E-44 3.6E-49 332.9 21.4 232 42-322 1-232 (270)
6 COG3240 Phospholipase/lecithin 100.0 8.6E-29 1.9E-33 230.0 14.3 256 37-323 26-290 (370)
7 PF00657 Lipase_GDSL: GDSL-lik 99.8 2.2E-20 4.7E-25 166.5 12.1 207 43-312 1-217 (234)
8 cd01839 SGNH_arylesterase_like 98.6 3.3E-07 7E-12 81.0 11.6 174 42-300 1-180 (208)
9 cd01823 SEST_like SEST_like. A 98.3 1.1E-05 2.4E-10 73.6 13.7 195 42-300 2-216 (259)
10 cd01832 SGNH_hydrolase_like_1 98.3 8.6E-06 1.9E-10 70.2 11.8 155 42-300 1-156 (185)
11 cd01836 FeeA_FeeB_like SGNH_hy 98.3 1.2E-05 2.6E-10 69.8 11.8 95 177-300 67-162 (191)
12 cd04501 SGNH_hydrolase_like_4 98.2 4E-05 8.7E-10 66.0 14.2 94 177-303 59-152 (183)
13 cd01844 SGNH_hydrolase_like_6 98.1 8.6E-05 1.9E-09 63.9 13.4 91 177-299 57-148 (177)
14 cd01830 XynE_like SGNH_hydrola 98.0 0.00017 3.6E-09 63.6 13.1 57 178-238 75-131 (204)
15 cd01834 SGNH_hydrolase_like_2 98.0 0.00023 5E-09 61.2 13.4 102 178-306 62-164 (191)
16 PF13472 Lipase_GDSL_2: GDSL-l 97.9 0.00014 3.1E-09 61.0 11.8 95 177-301 61-155 (179)
17 cd01827 sialate_O-acetylestera 97.9 0.00027 5.8E-09 61.1 13.4 53 177-238 67-120 (188)
18 cd01838 Isoamyl_acetate_hydrol 97.9 0.0002 4.3E-09 62.0 12.6 104 177-301 63-168 (199)
19 cd01821 Rhamnogalacturan_acety 97.9 9.5E-05 2.1E-09 64.7 10.5 97 177-304 65-161 (198)
20 cd01825 SGNH_hydrolase_peri1 S 97.9 6.6E-05 1.4E-09 64.8 9.2 92 178-301 57-149 (189)
21 cd04506 SGNH_hydrolase_YpmR_li 97.8 0.00069 1.5E-08 59.4 14.0 104 177-301 68-175 (204)
22 PRK10528 multifunctional acyl- 97.7 0.00048 1E-08 60.2 11.7 44 177-231 71-114 (191)
23 cd01841 NnaC_like NnaC (CMP-Ne 97.7 0.00067 1.5E-08 57.8 11.8 91 177-301 51-142 (174)
24 cd01835 SGNH_hydrolase_like_3 97.6 0.0026 5.5E-08 55.2 13.7 93 177-301 69-161 (193)
25 cd01822 Lysophospholipase_L1_l 97.5 0.0037 7.9E-08 53.1 13.3 46 177-234 64-109 (177)
26 cd01824 Phospholipase_B_like P 97.5 0.011 2.3E-07 55.3 17.2 222 38-303 8-247 (288)
27 KOG3035 Isoamyl acetate-hydrol 96.7 0.035 7.7E-07 49.0 11.9 112 177-304 68-180 (245)
28 PF14606 Lipase_GDSL_3: GDSL-l 96.6 0.02 4.2E-07 49.6 9.5 160 41-313 2-168 (178)
29 cd01831 Endoglucanase_E_like E 96.5 0.055 1.2E-06 45.9 12.2 46 180-234 58-104 (169)
30 cd01833 XynB_like SGNH_hydrola 96.3 0.022 4.9E-07 47.4 8.5 91 177-301 40-131 (157)
31 cd04502 SGNH_hydrolase_like_7 96.1 0.087 1.9E-06 44.6 11.2 88 177-301 50-138 (171)
32 cd00229 SGNH_hydrolase SGNH_hy 95.8 0.072 1.6E-06 43.9 9.0 95 177-302 65-160 (187)
33 cd01829 SGNH_hydrolase_peri2 S 95.6 0.076 1.6E-06 46.1 8.7 95 177-300 59-154 (200)
34 cd01828 sialate_O-acetylestera 95.6 0.079 1.7E-06 44.7 8.5 86 177-300 48-135 (169)
35 KOG3670 Phospholipase [Lipid t 95.4 0.23 5E-06 47.7 11.6 53 179-234 186-238 (397)
36 cd01820 PAF_acetylesterase_lik 94.9 0.22 4.8E-06 43.9 9.5 88 177-300 89-177 (214)
37 COG2755 TesA Lysophospholipase 93.7 1.1 2.4E-05 39.3 11.4 14 178-191 78-91 (216)
38 cd01826 acyloxyacyl_hydrolase_ 92.7 1.1 2.5E-05 41.9 10.2 127 178-310 123-275 (305)
39 cd01840 SGNH_hydrolase_yrhL_li 89.0 1.6 3.5E-05 36.2 6.9 15 177-191 50-64 (150)
40 COG3240 Phospholipase/lecithin 88.7 0.5 1.1E-05 45.2 3.9 68 177-247 98-167 (370)
41 PLN02757 sirohydrochlorine fer 86.7 3.8 8.2E-05 34.6 7.8 83 214-324 60-151 (154)
42 PF02633 Creatininase: Creatin 74.0 16 0.00034 32.9 7.7 85 182-303 61-145 (237)
43 cd03416 CbiX_SirB_N Sirohydroc 66.5 14 0.00031 28.2 5.0 52 215-294 47-98 (101)
44 PF01903 CbiX: CbiX; InterPro 66.4 7.2 0.00016 30.0 3.3 54 214-295 39-92 (105)
45 COG2845 Uncharacterized protei 61.0 29 0.00063 32.9 6.6 82 177-282 177-261 (354)
46 cd00384 ALAD_PBGS Porphobilino 54.4 53 0.0012 30.9 7.2 64 209-295 48-111 (314)
47 cd04824 eu_ALAD_PBGS_cysteine_ 53.7 20 0.00042 33.8 4.3 66 209-295 48-114 (320)
48 PRK13384 delta-aminolevulinic 53.1 37 0.00081 32.0 6.0 64 209-295 58-121 (322)
49 PRK09283 delta-aminolevulinic 47.8 74 0.0016 30.1 7.1 64 209-295 56-119 (323)
50 cd03414 CbiX_SirB_C Sirohydroc 46.0 64 0.0014 25.2 5.7 51 214-294 47-97 (117)
51 PF00490 ALAD: Delta-aminolevu 44.9 85 0.0018 29.8 7.0 65 210-295 55-119 (324)
52 cd04823 ALAD_PBGS_aspartate_ri 44.5 85 0.0018 29.7 6.9 66 209-295 51-116 (320)
53 PF08029 HisG_C: HisG, C-termi 44.1 20 0.00044 26.3 2.3 22 213-234 51-72 (75)
54 COG0113 HemB Delta-aminolevuli 42.2 53 0.0011 30.9 5.1 67 208-295 57-123 (330)
55 cd03412 CbiK_N Anaerobic cobal 39.4 95 0.0021 25.0 5.8 52 212-294 56-107 (127)
56 KOG4079 Putative mitochondrial 38.8 14 0.00031 30.3 0.8 16 223-238 42-57 (169)
57 TIGR03455 HisG_C-term ATP phos 38.6 37 0.00079 26.4 3.1 23 212-234 74-96 (100)
58 PRK13717 conjugal transfer pro 32.8 82 0.0018 25.6 4.3 27 260-286 70-96 (128)
59 COG1209 RfbA dTDP-glucose pyro 32.4 1.4E+02 0.0031 27.7 6.3 35 273-315 114-148 (286)
60 PF07172 GRP: Glycine rich pro 29.0 37 0.00079 26.2 1.7 6 6-11 3-8 (95)
61 cd04236 AAK_NAGS-Urea AAK_NAGS 26.6 1.9E+02 0.0042 26.7 6.3 45 177-236 34-78 (271)
62 PF08885 GSCFA: GSCFA family; 25.5 1.9E+02 0.0041 26.5 5.9 115 177-308 101-231 (251)
63 PF08331 DUF1730: Domain of un 24.9 2.1E+02 0.0045 20.8 5.1 66 224-295 9-78 (78)
64 KOG0907 Thioredoxin [Posttrans 23.4 1.2E+02 0.0026 23.7 3.7 32 272-304 37-68 (106)
65 TIGR02744 TrbI_Ftype type-F co 23.3 1.5E+02 0.0033 23.6 4.2 26 260-285 57-82 (112)
66 PF15284 PAGK: Phage-encoded v 20.8 40 0.00087 23.7 0.4 29 1-29 1-29 (61)
67 cd03411 Ferrochelatase_N Ferro 20.4 1E+02 0.0023 25.7 3.0 24 214-237 101-124 (159)
No 1
>PLN03156 GDSL esterase/lipase; Provisional
Probab=100.00 E-value=2.7e-62 Score=466.54 Aligned_cols=266 Identities=29% Similarity=0.475 Sum_probs=224.1
Q ss_pred CCCEEEEcCCcccccCCCCC---CCCCCCCCCCCCCCC-CCCccCCCCchHHHHHHhhcCC-CCCCCcccc--CCCCCCC
Q 020056 39 NFPAIFNFGDSNSDTGGISA---ALYPINWPYGQTYFH-MPAGRFSDGRLIIDFIAESFGL-PYLSAYLDS--VGTNFSH 111 (331)
Q Consensus 39 ~~~~l~vFGDSlsD~Gn~~~---~~~~~~~Pyg~~~~~-~p~gRfsnG~~~~d~la~~lg~-~~~ppyl~~--~~~~~~~ 111 (331)
.+++|||||||++|+||... ..+++.+|||++|++ +|+||||||++|+||||+.||+ +.+|||++. .+.+..+
T Consensus 26 ~~~aifvFGDSl~D~GN~~~l~~~~~~~~~pyG~~f~~~~ptGRfSnGr~~~D~iA~~lGl~p~~ppyl~~~~~~~~~~~ 105 (351)
T PLN03156 26 KVPAIIVFGDSSVDAGNNNQISTVAKSNFEPYGRDFPGGRPTGRFCNGRIAPDFISEAFGLKPAIPAYLDPSYNISDFAT 105 (351)
T ss_pred CCCEEEEecCcCccCCCccccccccccCCCCCCCCCCCCCCCccccCCChhhhhHHHHhCCCCCCCCCcCcccCchhhcc
Confidence 48999999999999999643 235688999999986 7999999999999999999999 889999874 2457889
Q ss_pred cceecccCCcccCCCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHhhcCCcccCCCcHHhhccCcEEEEEecchhhh
Q 020056 112 GANFATGGSTIRVPDRILPTNEGFGFSPFYLDIQLSQFMLFKSRSQMIRQRGGIYASLMPQEEYFSQALYTFDIGQNDFT 191 (331)
Q Consensus 112 G~NfA~gGA~~~~~~~~~~~~~~~~~~~~~l~~Qi~~f~~~~~~~~~~~g~~~~~~~~~~~~~~~~~sL~~v~iG~ND~~ 191 (331)
|+|||+||+++.+.+... ...+++.+||++|.++++++....|.. .+.+.++++||+||||+|||+
T Consensus 106 GvNFA~agag~~~~~~~~-------~~~~~l~~Qv~~F~~~~~~l~~~~g~~-------~~~~~~~~sL~~i~iG~NDy~ 171 (351)
T PLN03156 106 GVCFASAGTGYDNATSDV-------LSVIPLWKELEYYKEYQTKLRAYLGEE-------KANEIISEALYLISIGTNDFL 171 (351)
T ss_pred cceeecCCccccCCCccc-------cCccCHHHHHHHHHHHHHHHHHhhChH-------HHHHHHhcCeEEEEecchhHH
Confidence 999999999987654421 135689999999999887766544321 134567899999999999998
Q ss_pred hhhhc--CC-ChhhhhccHHHHHHHHHHhHHHHHHcCCcEEEEecCCcCCcccchhccCCCCCCCCCCCCCchhhhHHHH
Q 020056 192 ADLFA--DM-PIEKIYASVPDVINSFAYNVKSIYNSGGRSFWIHNTGPLGCYAFVFLYSPSAPALKDSAGCVKPYNELAQ 268 (331)
Q Consensus 192 ~~~~~--~~-s~~~~~~~v~~~v~~i~~~v~~L~~~GAr~~vV~nlpplgc~P~~~~~~~~~~~~~d~~~c~~~~n~l~~ 268 (331)
..|+. +. ...++.++++.+++.+.+.|++||++|||+|+|+|+||+||+|..+.... .+..+|.+.+|.+++
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~lv~~~~~~i~~Ly~~GAR~~~V~~lpplGc~P~~~~~~~-----~~~~~C~~~~n~~~~ 246 (351)
T PLN03156 172 ENYYTFPGRRSQYTVSQYQDFLIGIAENFVKKLYRLGARKISLGGLPPMGCLPLERTTNL-----MGGSECVEEYNDVAL 246 (351)
T ss_pred HHhhccccccccCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEecCCCccccCHHHHhhcC-----CCCCCchHHHHHHHH
Confidence 65532 11 11245678899999999999999999999999999999999999775421 124579999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEEEecchHHHHHHHCCCCCCCccCCccccCCcc
Q 020056 269 YFNLKLKEAVVQLRKAFPSAAFTYVDVYSIKYSLFKEPEKYGTSSVSHTTYGMEE 323 (331)
Q Consensus 269 ~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~ii~nP~~yGf~n~~~aCcg~~~ 323 (331)
.||++|++++++|++++|+++|+++|+|++++++++||++|||++++++|||.|.
T Consensus 247 ~~N~~L~~~l~~L~~~~pg~~i~~~D~y~~~~~ii~nP~~yGf~~~~~aCCg~g~ 301 (351)
T PLN03156 247 EFNGKLEKLVTKLNKELPGIKLVFSNPYDIFMQIIRNPSAYGFEVTSVACCATGM 301 (351)
T ss_pred HHHHHHHHHHHHHHHhCCCCeEEEEehHHHHHHHHhCccccCcccCCccccCCCC
Confidence 9999999999999999999999999999999999999999999999999999874
No 2
>cd01837 SGNH_plant_lipase_like SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=100.00 E-value=1.4e-60 Score=450.06 Aligned_cols=266 Identities=36% Similarity=0.624 Sum_probs=226.3
Q ss_pred CEEEEcCCcccccCCCCCCC---CCCCCCCCCCCCCCCCccCCCCchHHHHHHhhcCCCC-CCCccccCC-CCCCCccee
Q 020056 41 PAIFNFGDSNSDTGGISAAL---YPINWPYGQTYFHMPAGRFSDGRLIIDFIAESFGLPY-LSAYLDSVG-TNFSHGANF 115 (331)
Q Consensus 41 ~~l~vFGDSlsD~Gn~~~~~---~~~~~Pyg~~~~~~p~gRfsnG~~~~d~la~~lg~~~-~ppyl~~~~-~~~~~G~Nf 115 (331)
++||+||||++|+||...+. +++.+|||++|+++|+||||||++|+||||+.||++. +|||+.... .+..+|+||
T Consensus 1 ~al~vFGDS~sD~Gn~~~~~~~~~~~~~PyG~~~~~~p~GRfSnG~~~~d~la~~lgl~~~~p~~~~~~~~~~~~~G~Nf 80 (315)
T cd01837 1 PALFVFGDSLVDTGNNNYLPTLAKANFPPYGIDFPGRPTGRFSNGRLIIDFIAEALGLPLLPPPYLSPNGSSDFLTGVNF 80 (315)
T ss_pred CcEEEecCccccCCCccccccccccCCCCCcCcCCCCCCccccCCchhhhhhhhhccCCCCCCCccCccccchhhcccee
Confidence 47999999999999975432 3578999999998999999999999999999999997 677776422 457789999
Q ss_pred cccCCcccCCCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHhhcCCcccCCCcHHhhccCcEEEEEecchhhhhhhh
Q 020056 116 ATGGSTIRVPDRILPTNEGFGFSPFYLDIQLSQFMLFKSRSQMIRQRGGIYASLMPQEEYFSQALYTFDIGQNDFTADLF 195 (331)
Q Consensus 116 A~gGA~~~~~~~~~~~~~~~~~~~~~l~~Qi~~f~~~~~~~~~~~g~~~~~~~~~~~~~~~~~sL~~v~iG~ND~~~~~~ 195 (331)
|+|||++.+..... ..+++|..||++|++++++.+...|.. .+++..+++||+||||+|||+..+.
T Consensus 81 A~gGA~~~~~~~~~-------~~~~~l~~Qv~~F~~~~~~~~~~~g~~-------~~~~~~~~sL~~i~iG~ND~~~~~~ 146 (315)
T cd01837 81 ASGGAGILDSTGFL-------GSVISLSVQLEYFKEYKERLRALVGEE-------AAADILSKSLFLISIGSNDYLNNYF 146 (315)
T ss_pred cccCCccccCCcce-------eeeecHHHHHHHHHHHHHHHHHhhCHH-------HHHHHHhCCEEEEEecccccHHHHh
Confidence 99999998765431 246799999999999887765544321 1446679999999999999998654
Q ss_pred cCCC-hhhhhccHHHHHHHHHHhHHHHHHcCCcEEEEecCCcCCcccchhccCCCCCCCCCCCCCchhhhHHHHHHHHHH
Q 020056 196 ADMP-IEKIYASVPDVINSFAYNVKSIYNSGGRSFWIHNTGPLGCYAFVFLYSPSAPALKDSAGCVKPYNELAQYFNLKL 274 (331)
Q Consensus 196 ~~~s-~~~~~~~v~~~v~~i~~~v~~L~~~GAr~~vV~nlpplgc~P~~~~~~~~~~~~~d~~~c~~~~n~l~~~~N~~L 274 (331)
.+.+ ..+..++++.+++++.++|++||++|||+|+|+|+||+||+|.++..... +..+|.+.+|++++.||++|
T Consensus 147 ~~~~~~~~~~~~~~~~v~~i~~~v~~L~~~GAr~~~v~~lpplgc~P~~~~~~~~-----~~~~c~~~~n~~~~~~N~~L 221 (315)
T cd01837 147 ANPTRQYEVEAYVPFLVSNISSAIKRLYDLGARKFVVPGLGPLGCLPSQRTLFGG-----DGGGCLEELNELARLFNAKL 221 (315)
T ss_pred cCccccCCHHHHHHHHHHHHHHHHHHHHhCCCcEEEecCCCCcCccHHHHhhcCC-----CCCCcCHHHHHHHHHHHHHH
Confidence 3332 23556889999999999999999999999999999999999999876421 24589999999999999999
Q ss_pred HHHHHHHHHhCCCcEEEEEecchHHHHHHHCCCCCCCccCCccccCCcccc
Q 020056 275 KEAVVQLRKAFPSAAFTYVDVYSIKYSLFKEPEKYGTSSVSHTTYGMEEVR 325 (331)
Q Consensus 275 ~~~l~~l~~~~~~~~i~~~D~~~~~~~ii~nP~~yGf~n~~~aCcg~~~~~ 325 (331)
+++|++|++++|+++|+++|+|.+++++++||++|||++++++||++|...
T Consensus 222 ~~~l~~l~~~~~~~~i~~~D~y~~~~~i~~np~~yGf~~~~~aCc~~g~~~ 272 (315)
T cd01837 222 KKLLAELRRELPGAKFVYADIYNALLDLIQNPAKYGFENTLKACCGTGGPE 272 (315)
T ss_pred HHHHHHHHhcCCCcEEEEEehhHHHHHHHhChhhcCCcCCCcCccCCCCCC
Confidence 999999999999999999999999999999999999999999999988654
No 3
>cd01847 Triacylglycerol_lipase_like Triacylglycerol lipase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Members of this subfamily might hydrolyze triacylglycerol into diacylglycerol and fatty acid anions.
Probab=100.00 E-value=1.1e-49 Score=370.02 Aligned_cols=235 Identities=22% Similarity=0.251 Sum_probs=192.4
Q ss_pred CCEEEEcCCcccccCCCCCCCCCCCCCCCCCCCCCCCccCCCCchHHHHHHhhcCCCCCCCccccCCCCCCCcceecccC
Q 020056 40 FPAIFNFGDSNSDTGGISAALYPINWPYGQTYFHMPAGRFSDGRLIIDFIAESFGLPYLSAYLDSVGTNFSHGANFATGG 119 (331)
Q Consensus 40 ~~~l~vFGDSlsD~Gn~~~~~~~~~~Pyg~~~~~~p~gRfsnG~~~~d~la~~lg~~~~ppyl~~~~~~~~~G~NfA~gG 119 (331)
|++||||||||+|+||...+. + +++|+||||||++++|++++.+|+++. +...+.+..+|+|||+||
T Consensus 1 ~~~i~vFGDSl~D~Gn~~~~~-----~-----~~~~~gRFsnG~~~~d~~~~~~~~~~~---~~~~~~~~~~G~NfA~gG 67 (281)
T cd01847 1 FSRVVVFGDSLSDVGTYNRAG-----V-----GAAGGGRFTVNDGSIWSLGVAEGYGLT---TGTATPTTPGGTNYAQGG 67 (281)
T ss_pred CCceEEecCcccccCCCCccc-----c-----CCCCCcceecCCcchHHHHHHHHcCCC---cCcCcccCCCCceeeccC
Confidence 678999999999999985432 1 135799999999999999999998754 222234567899999999
Q ss_pred CcccCCCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHhhcCCcccCCCcHHhhccCcEEEEEecchhhhhhhhcCCC
Q 020056 120 STIRVPDRILPTNEGFGFSPFYLDIQLSQFMLFKSRSQMIRQRGGIYASLMPQEEYFSQALYTFDIGQNDFTADLFADMP 199 (331)
Q Consensus 120 A~~~~~~~~~~~~~~~~~~~~~l~~Qi~~f~~~~~~~~~~~g~~~~~~~~~~~~~~~~~sL~~v~iG~ND~~~~~~~~~s 199 (331)
|++.+....... ....+++.+||++|++.+. ...+++||+||||+|||+..+....+
T Consensus 68 a~~~~~~~~~~~----~~~~~~l~~Qv~~f~~~~~-------------------~~~~~sL~~i~iG~ND~~~~~~~~~~ 124 (281)
T cd01847 68 ARVGDTNNGNGA----GAVLPSVTTQIANYLAAGG-------------------GFDPNALYTVWIGGNDLIAALAALTT 124 (281)
T ss_pred ccccCCCCcccc----ccCCCCHHHHHHHHHHhcC-------------------CCCCCeEEEEecChhHHHHHHhhccc
Confidence 999875432100 0135789999999986431 12579999999999999976543222
Q ss_pred ----hhhhhccHHHHHHHHHHhHHHHHHcCCcEEEEecCCcCCcccchhccCCCCCCCCCCCCCchhhhHHHHHHHHHHH
Q 020056 200 ----IEKIYASVPDVINSFAYNVKSIYNSGGRSFWIHNTGPLGCYAFVFLYSPSAPALKDSAGCVKPYNELAQYFNLKLK 275 (331)
Q Consensus 200 ----~~~~~~~v~~~v~~i~~~v~~L~~~GAr~~vV~nlpplgc~P~~~~~~~~~~~~~d~~~c~~~~n~l~~~~N~~L~ 275 (331)
..++.++++.+++++.++|++||++|||+|+|+++||+||+|.++... ..|.+.++++++.||.+|+
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~v~~L~~~GAr~ilv~~lpplgc~P~~~~~~---------~~~~~~~n~~~~~~N~~L~ 195 (281)
T cd01847 125 ATTTQAAAVAAAATAAADLASQVKNLLDAGARYILVPNLPDVSYTPEAAGTP---------AAAAALASALSQTYNQTLQ 195 (281)
T ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHCCCCEEEEeCCCCcccCcchhhcc---------chhHHHHHHHHHHHHHHHH
Confidence 134668899999999999999999999999999999999999987652 2588999999999999999
Q ss_pred HHHHHHHHhCCCcEEEEEecchHHHHHHHCCCCCCCccCCccccCCcc
Q 020056 276 EAVVQLRKAFPSAAFTYVDVYSIKYSLFKEPEKYGTSSVSHTTYGMEE 323 (331)
Q Consensus 276 ~~l~~l~~~~~~~~i~~~D~~~~~~~ii~nP~~yGf~n~~~aCcg~~~ 323 (331)
++|++|+++ +|+++|+|.+++++++||++|||++++++||+.+.
T Consensus 196 ~~l~~l~~~----~i~~~D~~~~~~~i~~nP~~yGf~~~~~~CC~~~~ 239 (281)
T cd01847 196 SGLNQLGAN----NIIYVDTATLLKEVVANPAAYGFTNTTTPACTSTS 239 (281)
T ss_pred HHHHhccCC----eEEEEEHHHHHHHHHhChHhcCccCCCccccCCCC
Confidence 999998754 89999999999999999999999999999999764
No 4
>PRK15381 pathogenicity island 2 effector protein SseJ; Provisional
Probab=100.00 E-value=3.6e-49 Score=379.10 Aligned_cols=222 Identities=22% Similarity=0.240 Sum_probs=183.2
Q ss_pred CCCCCEEEEcCCcccccCCCC-CCCCCCCCCCCCCCCCCCCccCCCCchHHHHHHhhcCCCCCCCccccCCCCCCCccee
Q 020056 37 SCNFPAIFNFGDSNSDTGGIS-AALYPINWPYGQTYFHMPAGRFSDGRLIIDFIAESFGLPYLSAYLDSVGTNFSHGANF 115 (331)
Q Consensus 37 ~~~~~~l~vFGDSlsD~Gn~~-~~~~~~~~Pyg~~~~~~p~gRfsnG~~~~d~la~~lg~~~~ppyl~~~~~~~~~G~Nf 115 (331)
..+|++||+|||||+|+||.. .......||||.+| +||||||++|+|||| .|||++ .+|+||
T Consensus 139 ~~~~~ai~vFGDSlsDtGnn~y~~t~~~~PPyG~~f----tGRFSNG~v~~DfLA-------~~pyl~------~~G~NF 201 (408)
T PRK15381 139 LGDITRLVFFGDSLSDSLGRMFEKTHHILPSYGQYF----GGRFTNGFTWTEFLS-------SPHFLG------KEMLNF 201 (408)
T ss_pred cCCCCeEEEeCCccccCCCccccccccCCCCCCCCC----CcccCCCchhhheec-------cccccC------CCCceE
Confidence 356999999999999997743 22224579999987 899999999999999 356764 268999
Q ss_pred cccCCcccCCCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHhhcCCcccCCCcHHhhccCcEEEEEecchhhhhhhh
Q 020056 116 ATGGSTIRVPDRILPTNEGFGFSPFYLDIQLSQFMLFKSRSQMIRQRGGIYASLMPQEEYFSQALYTFDIGQNDFTADLF 195 (331)
Q Consensus 116 A~gGA~~~~~~~~~~~~~~~~~~~~~l~~Qi~~f~~~~~~~~~~~g~~~~~~~~~~~~~~~~~sL~~v~iG~ND~~~~~~ 195 (331)
|+|||++......... +...+++.+||++|+. .+++||+||||+|||+. +
T Consensus 202 A~GGA~~~t~~~~~~~----~~~~~~L~~Qv~~~~~------------------------~~~aL~lV~iG~NDy~~-~- 251 (408)
T PRK15381 202 AEGGSTSASYSCFNCI----GDFVSNTDRQVASYTP------------------------SHQDLAIFLLGANDYMT-L- 251 (408)
T ss_pred eecccccccccccccc----cCccCCHHHHHHHHHh------------------------cCCcEEEEEeccchHHH-h-
Confidence 9999999732111000 0124689999998642 15899999999999984 3
Q ss_pred cCCChhhhhccHHHHHHHHHHhHHHHHHcCCcEEEEecCCcCCcccchhccCCCCCCCCCCCCCchhhhHHHHHHHHHHH
Q 020056 196 ADMPIEKIYASVPDVINSFAYNVKSIYNSGGRSFWIHNTGPLGCYAFVFLYSPSAPALKDSAGCVKPYNELAQYFNLKLK 275 (331)
Q Consensus 196 ~~~s~~~~~~~v~~~v~~i~~~v~~L~~~GAr~~vV~nlpplgc~P~~~~~~~~~~~~~d~~~c~~~~n~l~~~~N~~L~ 275 (331)
..++++.+++++.++|++||++|||+|+|+|+||+||+|..+.. ...+.+|.+++.||++|+
T Consensus 252 -------~~~~v~~vV~~~~~~l~~Ly~lGARk~vV~nlpPlGC~P~~~~~-----------~~~~~~N~~a~~fN~~L~ 313 (408)
T PRK15381 252 -------HKDNVIMVVEQQIDDIEKIISGGVNNVLVMGIPDLSLTPYGKHS-----------DEKRKLKDESIAHNALLK 313 (408)
T ss_pred -------HHHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCCcchhhcc-----------CchHHHHHHHHHHHHHHH
Confidence 12356789999999999999999999999999999999998742 124789999999999999
Q ss_pred HHHHHHHHhCCCcEEEEEecchHHHHHHHCCCCCCCccCCccccCCccc
Q 020056 276 EAVVQLRKAFPSAAFTYVDVYSIKYSLFKEPEKYGTSSVSHTTYGMEEV 324 (331)
Q Consensus 276 ~~l~~l~~~~~~~~i~~~D~~~~~~~ii~nP~~yGf~n~~~aCcg~~~~ 324 (331)
++|++|++++|+++|+++|+|+++.++++||++|||++++. ||++|.+
T Consensus 314 ~~L~~L~~~~pg~~ivy~D~y~~~~~ii~nP~~yGF~~~~~-cCg~G~~ 361 (408)
T PRK15381 314 TNVEELKEKYPQHKICYYETADAFKVIMEAASNIGYDTENP-YTHHGYV 361 (408)
T ss_pred HHHHHHHHhCCCCEEEEEEhHHHHHHHHhCHHhcCCCcccc-ccCCCcc
Confidence 99999999999999999999999999999999999999886 9998855
No 5
>cd01846 fatty_acyltransferase_like Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Might catalyze fatty acid transfer between phosphatidylcholine and sterols.
Probab=100.00 E-value=1.7e-44 Score=332.87 Aligned_cols=232 Identities=23% Similarity=0.310 Sum_probs=189.3
Q ss_pred EEEEcCCcccccCCCCCCCCCCCCCCCCCCCCCCCccCCCCchHHHHHHhhcCCCCCCCccccCCCCCCCcceecccCCc
Q 020056 42 AIFNFGDSNSDTGGISAALYPINWPYGQTYFHMPAGRFSDGRLIIDFIAESFGLPYLSAYLDSVGTNFSHGANFATGGST 121 (331)
Q Consensus 42 ~l~vFGDSlsD~Gn~~~~~~~~~~Pyg~~~~~~p~gRfsnG~~~~d~la~~lg~~~~ppyl~~~~~~~~~G~NfA~gGA~ 121 (331)
+||+|||||+|+||.........+|.+. .+|.||||||++|+|+||+.+|++. ...|+|||+|||+
T Consensus 1 ~l~vFGDS~sD~Gn~~~~~~~~~~~~~~---~~~~grfsnG~~w~d~la~~lg~~~-----------~~~~~N~A~~Ga~ 66 (270)
T cd01846 1 RLVVFGDSLSDTGNIFKLTGGSNPPPSP---PYFGGRFSNGPVWVEYLAATLGLSG-----------LKQGYNYAVGGAT 66 (270)
T ss_pred CeEEeeCccccCCcchhhcCCCCCCCCC---CCCCCccCCchhHHHHHHHHhCCCc-----------cCCcceeEecccc
Confidence 4899999999999975432211222222 3468999999999999999999753 2357999999999
Q ss_pred ccCCCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHhhcCCcccCCCcHHhhccCcEEEEEecchhhhhhhhcCCChh
Q 020056 122 IRVPDRILPTNEGFGFSPFYLDIQLSQFMLFKSRSQMIRQRGGIYASLMPQEEYFSQALYTFDIGQNDFTADLFADMPIE 201 (331)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~l~~Qi~~f~~~~~~~~~~~g~~~~~~~~~~~~~~~~~sL~~v~iG~ND~~~~~~~~~s~~ 201 (331)
+........ .....++.+||++|++.++. +..+++|++||+|+||+...+. . .+
T Consensus 67 ~~~~~~~~~-----~~~~~~l~~Qv~~f~~~~~~------------------~~~~~~l~~i~~G~ND~~~~~~-~--~~ 120 (270)
T cd01846 67 AGAYNVPPY-----PPTLPGLSDQVAAFLAAHKL------------------RLPPDTLVAIWIGANDLLNALD-L--PQ 120 (270)
T ss_pred cCCcccCCC-----CCCCCCHHHHHHHHHHhccC------------------CCCCCcEEEEEeccchhhhhcc-c--cc
Confidence 987654211 12357999999999875431 2347899999999999997542 2 12
Q ss_pred hhhccHHHHHHHHHHhHHHHHHcCCcEEEEecCCcCCcccchhccCCCCCCCCCCCCCchhhhHHHHHHHHHHHHHHHHH
Q 020056 202 KIYASVPDVINSFAYNVKSIYNSGGRSFWIHNTGPLGCYAFVFLYSPSAPALKDSAGCVKPYNELAQYFNLKLKEAVVQL 281 (331)
Q Consensus 202 ~~~~~v~~~v~~i~~~v~~L~~~GAr~~vV~nlpplgc~P~~~~~~~~~~~~~d~~~c~~~~n~l~~~~N~~L~~~l~~l 281 (331)
....++.++++++.++|++|+++|+|+|+|+++||++|+|.++..... ..+.++.+++.||++|++++++|
T Consensus 121 ~~~~~~~~~~~~~~~~i~~l~~~g~~~i~v~~~p~~~~~P~~~~~~~~---------~~~~~~~~~~~~N~~L~~~l~~l 191 (270)
T cd01846 121 NPDTLVTRAVDNLFQALQRLYAAGARNFLVLNLPDLGLTPAFQAQGDA---------VAARATALTAAYNAKLAEKLAEL 191 (270)
T ss_pred cccccHHHHHHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccCCcc---------cHHHHHHHHHHHHHHHHHHHHHH
Confidence 345678899999999999999999999999999999999999876421 12689999999999999999999
Q ss_pred HHhCCCcEEEEEecchHHHHHHHCCCCCCCccCCccccCCc
Q 020056 282 RKAFPSAAFTYVDVYSIKYSLFKEPEKYGTSSVSHTTYGME 322 (331)
Q Consensus 282 ~~~~~~~~i~~~D~~~~~~~ii~nP~~yGf~n~~~aCcg~~ 322 (331)
++++|+++|+++|+|.++.++++||++|||++++++||+.+
T Consensus 192 ~~~~~~~~i~~~D~~~~~~~~~~~p~~yGf~~~~~~C~~~~ 232 (270)
T cd01846 192 KAQHPGVNILLFDTNALFNDILDNPAAYGFTNVTDPCLDYV 232 (270)
T ss_pred HHhCCCCeEEEEEhHHHHHHHHhCHHhcCCCcCcchhcCCC
Confidence 99999999999999999999999999999999999999864
No 6
>COG3240 Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only]
Probab=99.96 E-value=8.6e-29 Score=230.02 Aligned_cols=256 Identities=19% Similarity=0.239 Sum_probs=177.7
Q ss_pred CCCCCEEEEcCCcccccCCCCCCCCCCCCCCCCCCCCCCCccCC--CCchHHHHHHhhcCC-CCCCCcc----ccCCCCC
Q 020056 37 SCNFPAIFNFGDSNSDTGGISAALYPINWPYGQTYFHMPAGRFS--DGRLIIDFIAESFGL-PYLSAYL----DSVGTNF 109 (331)
Q Consensus 37 ~~~~~~l~vFGDSlsD~Gn~~~~~~~~~~Pyg~~~~~~p~gRfs--nG~~~~d~la~~lg~-~~~ppyl----~~~~~~~ 109 (331)
.++|..++||||||||+|+........--| ..|-..+..+++ +|..|.++.++.+|. ...+.++ ++.+...
T Consensus 26 ~~~~~~l~vfGDSlSDsg~~~~~a~~~~~~--~~~~~~~gp~~~~G~~~~~~~~~p~~lg~l~~~~~~~~~~~~~~~~~~ 103 (370)
T COG3240 26 LAPFQRLVVFGDSLSDSGNYYRPAGHHGDP--GSYGTIPGPSYQNGNGYTYVTVVPETLGQLGVNHDFTYAAADPNGLYI 103 (370)
T ss_pred ccccceEEEeccchhhcccccCcccccCCc--cccccccCCcccCCCceeeeccchhhhccccccccccccccCcccccC
Confidence 367999999999999999976432211111 111112223344 578889999998882 1111111 1122222
Q ss_pred --CCcceecccCCcccCCCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHhhcCCcccCCCcHHhhccCcEEEEEecc
Q 020056 110 --SHGANFATGGSTIRVPDRILPTNEGFGFSPFYLDIQLSQFMLFKSRSQMIRQRGGIYASLMPQEEYFSQALYTFDIGQ 187 (331)
Q Consensus 110 --~~G~NfA~gGA~~~~~~~~~~~~~~~~~~~~~l~~Qi~~f~~~~~~~~~~~g~~~~~~~~~~~~~~~~~sL~~v~iG~ 187 (331)
..|.|||+|||++...+... ..+....++.+|+.+|+......- ... . .+.-....+.|+.+|.|+
T Consensus 104 ~~a~gnd~A~gga~~~~~~~~~----~i~~~~~~~~~Qv~~~l~a~~~~~--v~~--~----~~~~~l~p~~l~~~~gga 171 (370)
T COG3240 104 HWAGGNDLAVGGARSTEPNTGN----SIGASATSLAQQVGAFLAAGQGGF--VWP--N----YPAQGLDPSALYFLWGGA 171 (370)
T ss_pred cccccccHhhhccccccccccc----cccccccchHHHHHHHHHhcCCcc--ccc--c----ccccccCHHHHHHHhhcc
Confidence 47899999999998766111 013467899999999987543210 000 0 011123367889999999
Q ss_pred hhhhhhhhcCCChhhhhccHHHHHHHHHHhHHHHHHcCCcEEEEecCCcCCcccchhccCCCCCCCCCCCCCchhhhHHH
Q 020056 188 NDFTADLFADMPIEKIYASVPDVINSFAYNVKSIYNSGGRSFWIHNTGPLGCYAFVFLYSPSAPALKDSAGCVKPYNELA 267 (331)
Q Consensus 188 ND~~~~~~~~~s~~~~~~~v~~~v~~i~~~v~~L~~~GAr~~vV~nlpplgc~P~~~~~~~~~~~~~d~~~c~~~~n~l~ 267 (331)
|||+..-+.+ ....+.+.......+...|++|.++|||+|+|+++||++.+|....... -...+..++
T Consensus 172 nd~~~~~~~~--a~~~q~~~~~~~~~~~~~Vq~L~~AGA~~i~v~~lpDl~l~P~~~~~~~----------~~~~a~~~t 239 (370)
T COG3240 172 NDYLALPMLK--AAAYQQLEGSTKADQSSAVQRLIAAGARNILVMTLPDLSLTPAGKAYGT----------EAIQASQAT 239 (370)
T ss_pred hhhhcccccc--hhhhHHHhcchhhHHHHHHHHHHHhhccEEEEeeccccccccccccccc----------hHHHHHHHH
Confidence 9998741111 1122233444467899999999999999999999999999999887532 233888999
Q ss_pred HHHHHHHHHHHHHHHHhCCCcEEEEEecchHHHHHHHCCCCCCCccCCccccCCcc
Q 020056 268 QYFNLKLKEAVVQLRKAFPSAAFTYVDVYSIKYSLFKEPEKYGTSSVSHTTYGMEE 323 (331)
Q Consensus 268 ~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~ii~nP~~yGf~n~~~aCcg~~~ 323 (331)
..||..|++.|++++ .+|+.+|++.++++|+.||+.|||+|++..||....
T Consensus 240 ~~~Na~L~~~L~~~g-----~nIi~iD~~~llk~im~nPa~fGlant~~~~c~~~~ 290 (370)
T COG3240 240 IAFNASLTSQLEQLG-----GNIIRIDTYTLLKEIMTNPAEFGLANTTAPACDATV 290 (370)
T ss_pred HHHHHHHHHHHHHhc-----CcEEEeEhHHHHHHHHhCHHhcCcccCCCcccCccc
Confidence 999999999998874 899999999999999999999999999999976543
No 7
>PF00657 Lipase_GDSL: GDSL-like Lipase/Acylhydrolase; InterPro: IPR001087 A variety of lipolytic enzymes with serine as part of the active site have been identified []. Members of this entry include; Aeromonas hydrophila lipase, Vibrio mimicus arylesterase, Vibrio parahaemolyticus thermolabile haemolysin, rabbit phospholipase (AdRab-B), and Brassica napus anter-specific proline-rich protein.; GO: 0016788 hydrolase activity, acting on ester bonds, 0006629 lipid metabolic process; PDB: 2WAO_A 2WAB_A 1V2G_A 1U8U_A 1JRL_A 1IVN_A 1J00_A 1DEO_A 1K7C_A 1PP4_A ....
Probab=99.83 E-value=2.2e-20 Score=166.51 Aligned_cols=207 Identities=27% Similarity=0.373 Sum_probs=143.8
Q ss_pred EEEcCCcccccCCCCCCCCCCCCCCCCCCCCCCCccCCCCchHHHHHHhhcCCCCCCCccccCCCCCCCcceecccCCcc
Q 020056 43 IFNFGDSNSDTGGISAALYPINWPYGQTYFHMPAGRFSDGRLIIDFIAESFGLPYLSAYLDSVGTNFSHGANFATGGSTI 122 (331)
Q Consensus 43 l~vFGDSlsD~Gn~~~~~~~~~~Pyg~~~~~~p~gRfsnG~~~~d~la~~lg~~~~ppyl~~~~~~~~~G~NfA~gGA~~ 122 (331)
|++||||+||. +|+++|..|.+.++..+...... . .......+.|+|++|+++
T Consensus 1 i~~fGDS~td~-----------------------~~~~~~~~~~~~~~~~l~~~~~~---~-~~~~~~~~~n~a~~G~~~ 53 (234)
T PF00657_consen 1 IVVFGDSLTDG-----------------------GGDSNGGGWPEGLANNLSSCLGA---N-QRNSGVDVSNYAISGATS 53 (234)
T ss_dssp EEEEESHHHHT-----------------------TTSSTTCTHHHHHHHHCHHCCHH---H-HHCTTEEEEEEE-TT--C
T ss_pred CEEEeehhccc-----------------------CCCCCCcchhhhHHHHHhhcccc---c-cCCCCCCeeccccCCCcc
Confidence 68999999999 36788999999999987322100 0 001123468999999997
Q ss_pred cCCCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHhhcCCcccCCCcHHhhccCcEEEEEecchhhhhhhhcCCChhh
Q 020056 123 RVPDRILPTNEGFGFSPFYLDIQLSQFMLFKSRSQMIRQRGGIYASLMPQEEYFSQALYTFDIGQNDFTADLFADMPIEK 202 (331)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~l~~Qi~~f~~~~~~~~~~~g~~~~~~~~~~~~~~~~~sL~~v~iG~ND~~~~~~~~~s~~~ 202 (331)
........ .....+..|+...... ......+|++||+|+||++... . ...
T Consensus 54 ~~~~~~~~------~~~~~~~~~~~~~~~~--------------------~~~~~~~lv~i~~G~ND~~~~~--~--~~~ 103 (234)
T PF00657_consen 54 DGDLYNLW------AQVQNISQQISRLLDS--------------------KSFYDPDLVVIWIGTNDYFNNR--D--SSD 103 (234)
T ss_dssp C-HGGCCC------CTCHHHHHHHHHHHHH--------------------HHHHTTSEEEEE-SHHHHSSCC--S--CST
T ss_pred ccccchhh------HHHHHHHHHhhccccc--------------------cccCCcceEEEecccCcchhhc--c--cch
Confidence 54321110 0111233333332211 1233689999999999987411 1 122
Q ss_pred hhccHHHHHHHHHHhHHHHHHcCCc-----EEEEecCCcCCcccchhccCCCCCCCCCCCCCchhhhHHHHHHHHHHHHH
Q 020056 203 IYASVPDVINSFAYNVKSIYNSGGR-----SFWIHNTGPLGCYAFVFLYSPSAPALKDSAGCVKPYNELAQYFNLKLKEA 277 (331)
Q Consensus 203 ~~~~v~~~v~~i~~~v~~L~~~GAr-----~~vV~nlpplgc~P~~~~~~~~~~~~~d~~~c~~~~n~l~~~~N~~L~~~ 277 (331)
....+..+++.+.+.|++|++.|+| +++++++||++|.|....... +...|.+.+++.+..||++|++.
T Consensus 104 ~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~n~~l~~~ 177 (234)
T PF00657_consen 104 NNTSVEEFVENLRNAIKRLRSNGARLIIVANIVVINLPPIGCLPAWSSNNK------DSASCIERLNAIVAAFNSALREV 177 (234)
T ss_dssp THHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEEEEHHC-GGGSTTHHHTHT------TTCTTHHHHHHHHHHHHHHHHHH
T ss_pred hhhhHhhHhhhhhhhhhHHhccCCccccccccccccccccccccccccccc------cccccchhhHHHHHHHHHHHHHH
Confidence 3445678899999999999999999 999999999999888776542 23579999999999999999999
Q ss_pred HHHHHHhCC-CcEEEEEecchHHHHH--HHCCC--CCCCc
Q 020056 278 VVQLRKAFP-SAAFTYVDVYSIKYSL--FKEPE--KYGTS 312 (331)
Q Consensus 278 l~~l~~~~~-~~~i~~~D~~~~~~~i--i~nP~--~yGf~ 312 (331)
+.++++.++ +.++.++|++..+.++ ..+|. +|-|-
T Consensus 178 ~~~l~~~~~~~~~v~~~D~~~~~~~~~~~~~~~~~~~~~~ 217 (234)
T PF00657_consen 178 AAQLRKDYPKGANVPYFDIYSIFSDMYGIQNPENDKYMFW 217 (234)
T ss_dssp HHHHHHCHHHHCTEEEEEHHHHHHHHHHHHHGGHHHCBBS
T ss_pred hhhcccccccCCceEEEEHHHHHHHhhhccCcccceeccC
Confidence 999988776 8899999999999999 77776 45443
No 8
>cd01839 SGNH_arylesterase_like SGNH_hydrolase subfamily, similar to arylesterase (7-aminocephalosporanic acid-deacetylating enzyme) of A. tumefaciens. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.64 E-value=3.3e-07 Score=81.04 Aligned_cols=174 Identities=17% Similarity=0.132 Sum_probs=95.4
Q ss_pred EEEEcCCcccccCCCCCCCCCCCCCCCCCCCCCCCccCCCCchHHHHHHhhcCCCCCCCccccCCCCCCCcceecccCCc
Q 020056 42 AIFNFGDSNSDTGGISAALYPINWPYGQTYFHMPAGRFSDGRLIIDFIAESFGLPYLSAYLDSVGTNFSHGANFATGGST 121 (331)
Q Consensus 42 ~l~vFGDSlsD~Gn~~~~~~~~~~Pyg~~~~~~p~gRfsnG~~~~d~la~~lg~~~~ppyl~~~~~~~~~G~NfA~gGA~ 121 (331)
.|+.||||++. |.. +-+ .+|++.+..|+..|++.|+... +. ..-+|.+++|.+
T Consensus 1 ~I~~~GDSiT~-G~~---------~~~-------~~~~~~~~~w~~~L~~~l~~~~-~~---------~~viN~Gv~G~t 53 (208)
T cd01839 1 TILCFGDSNTW-GII---------PDT-------GGRYPFEDRWPGVLEKALGANG-EN---------VRVIEDGLPGRT 53 (208)
T ss_pred CEEEEecCccc-CCC---------CCC-------CCcCCcCCCCHHHHHHHHccCC-CC---------eEEEecCcCCcc
Confidence 37899999873 221 101 2355667889999999986542 11 123799999988
Q ss_pred ccCCCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHhhcCCcccCCCcHHhhccCcEEEEEecchhhhhhhhcCCChh
Q 020056 122 IRVPDRILPTNEGFGFSPFYLDIQLSQFMLFKSRSQMIRQRGGIYASLMPQEEYFSQALYTFDIGQNDFTADLFADMPIE 201 (331)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~l~~Qi~~f~~~~~~~~~~~g~~~~~~~~~~~~~~~~~sL~~v~iG~ND~~~~~~~~~s~~ 201 (331)
+...... + ....-++.+.+... ....-++++|++|.||+...+ +.+.
T Consensus 54 t~~~~~~-~----------~~~~~l~~l~~~l~-------------------~~~~pd~vii~lGtND~~~~~--~~~~- 100 (208)
T cd01839 54 TVLDDPF-F----------PGRNGLTYLPQALE-------------------SHSPLDLVIIMLGTNDLKSYF--NLSA- 100 (208)
T ss_pred eeccCcc-c----------cCcchHHHHHHHHH-------------------hCCCCCEEEEecccccccccc--CCCH-
Confidence 7532110 0 00111122211111 012458899999999987421 1222
Q ss_pred hhhccHHHHHHHHHHhHHHHHHc------CCcEEEEecCCcCCcccchhccCCCCCCCCCCCCCchhhhHHHHHHHHHHH
Q 020056 202 KIYASVPDVINSFAYNVKSIYNS------GGRSFWIHNTGPLGCYAFVFLYSPSAPALKDSAGCVKPYNELAQYFNLKLK 275 (331)
Q Consensus 202 ~~~~~v~~~v~~i~~~v~~L~~~------GAr~~vV~nlpplgc~P~~~~~~~~~~~~~d~~~c~~~~n~l~~~~N~~L~ 275 (331)
....+++.+.|+.+.+. +..++++++.||+...+.. ...+....+.....||+.++
T Consensus 101 ------~~~~~~l~~lv~~i~~~~~~~~~~~~~iil~~pp~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~ 162 (208)
T cd01839 101 ------AEIAQGLGALVDIIRTAPIEPGMPAPKILIVAPPPIRTPKGS------------LAGKFAGAEEKSKGLADAYR 162 (208)
T ss_pred ------HHHHHHHHHHHHHHHhccccccCCCCCEEEEeCCccCccccc------------hhhhhccHHHHHHHHHHHHH
Confidence 23334444444554443 4667889898887211110 01123344566677887776
Q ss_pred HHHHHHHHhCCCcEEEEEecchHHH
Q 020056 276 EAVVQLRKAFPSAAFTYVDVYSIKY 300 (331)
Q Consensus 276 ~~l~~l~~~~~~~~i~~~D~~~~~~ 300 (331)
+..++ + ++.++|++.++.
T Consensus 163 ~~a~~----~---~~~~iD~~~~~~ 180 (208)
T cd01839 163 ALAEE----L---GCHFFDAGSVGS 180 (208)
T ss_pred HHHHH----h---CCCEEcHHHHhc
Confidence 65543 2 356789877653
No 9
>cd01823 SEST_like SEST_like. A family of secreted SGNH-hydrolases similar to Streptomyces scabies esterase (SEST), a causal agent of the potato scab disease, which hydrolyzes a specific ester bond in suberin, a plant lipid. The tertiary fold of this enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxylic acid.
Probab=98.33 E-value=1.1e-05 Score=73.63 Aligned_cols=195 Identities=14% Similarity=-0.016 Sum_probs=100.4
Q ss_pred EEEEcCCcccccCCCCCCCCCCCCCCCCCCCCCCCccCCCCchHHHHHHhhcCCCCCCCccccCCCCCCCcceecccCCc
Q 020056 42 AIFNFGDSNSDTGGISAALYPINWPYGQTYFHMPAGRFSDGRLIIDFIAESFGLPYLSAYLDSVGTNFSHGANFATGGST 121 (331)
Q Consensus 42 ~l~vFGDSlsD~Gn~~~~~~~~~~Pyg~~~~~~p~gRfsnG~~~~d~la~~lg~~~~ppyl~~~~~~~~~G~NfA~gGA~ 121 (331)
++++||||++---.. +++... .+....|. ...|++.+++.|+... ..-.|+|.+|++
T Consensus 2 ~~v~iGDS~~~G~g~--------~~~~~~-~~~~c~rs--~~~y~~~la~~l~~~~------------~~~~n~a~sGa~ 58 (259)
T cd01823 2 RYVALGDSYAAGPGA--------GPLDDG-PDDGCRRS--SNSYPTLLARALGDET------------LSFTDVACSGAT 58 (259)
T ss_pred CEEEecchhhcCCCC--------CcccCC-CCCCCccC--CccHHHHHHHHcCCCC------------ceeeeeeecCcc
Confidence 578999997643221 111100 11113343 4679999999998530 122699999999
Q ss_pred ccCCCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHhhcCCcccCCCcHHhhccCcEEEEEecchhhhhhhhc-----
Q 020056 122 IRVPDRILPTNEGFGFSPFYLDIQLSQFMLFKSRSQMIRQRGGIYASLMPQEEYFSQALYTFDIGQNDFTADLFA----- 196 (331)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~l~~Qi~~f~~~~~~~~~~~g~~~~~~~~~~~~~~~~~sL~~v~iG~ND~~~~~~~----- 196 (331)
+.+-.... . .....|.+. + ...-++++|.||+||+......
T Consensus 59 ~~~~~~~~--------~-~~~~~~~~~-------l------------------~~~~dlV~i~iG~ND~~~~~~~~~~~~ 104 (259)
T cd01823 59 TTDGIEPQ--------Q-GGIAPQAGA-------L------------------DPDTDLVTITIGGNDLGFADVVKACIL 104 (259)
T ss_pred cccccccc--------c-CCCchhhcc-------c------------------CCCCCEEEEEECccccchHHHHHHHhh
Confidence 86533210 1 111112110 0 0135889999999998643110
Q ss_pred CC-----------ChhhhhccHHHHHHHHHHhHHHHHHc-CCcEEEEecCCcCCcccchhccCCC---CCCCCCCCCCch
Q 020056 197 DM-----------PIEKIYASVPDVINSFAYNVKSIYNS-GGRSFWIHNTGPLGCYAFVFLYSPS---APALKDSAGCVK 261 (331)
Q Consensus 197 ~~-----------s~~~~~~~v~~~v~~i~~~v~~L~~~-GAr~~vV~nlpplgc~P~~~~~~~~---~~~~~d~~~c~~ 261 (331)
.. .............+++...|++|.+. .--+|+|++.|++--. -...... ..... .....+
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~i~~~~p~a~I~~~gyp~~~~~--~~~~~~~~~~~~~~~-~~~~~~ 181 (259)
T cd01823 105 TGGGSSLAQEKGAADGARDAALDEVGARLKAVLDRIRERAPNARVVVVGYPRLFPP--DGGDCDKSCSPGTPL-TPADRP 181 (259)
T ss_pred ccCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecccccccC--CCCCcccccccCCCC-CHHHHH
Confidence 00 00011222345556666677777653 3456899998875311 0000000 00000 001224
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhCCCcEEEEEecchHHH
Q 020056 262 PYNELAQYFNLKLKEAVVQLRKAFPSAAFTYVDVYSIKY 300 (331)
Q Consensus 262 ~~n~l~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~ 300 (331)
.+++....+|+.+++..+ ++...++.++|++..+.
T Consensus 182 ~~~~~~~~ln~~i~~~a~----~~~~~~v~fvD~~~~f~ 216 (259)
T cd01823 182 ELNQLVDKLNALIRRAAA----DAGDYKVRFVDTDAPFA 216 (259)
T ss_pred HHHHHHHHHHHHHHHHHH----HhCCceEEEEECCCCcC
Confidence 556666677766655544 44335688899987665
No 10
>cd01832 SGNH_hydrolase_like_1 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. Myxobacterial members of this subfamily have been reported to be involved in adventurous gliding motility.
Probab=98.31 E-value=8.6e-06 Score=70.23 Aligned_cols=155 Identities=17% Similarity=0.115 Sum_probs=90.0
Q ss_pred EEEEcCCcccccCCCCCCCCCCCCCCCCCCCCCCCccCCCCchHHHHHHhhcCCCCCCCccccCCCCCCCcceecccCCc
Q 020056 42 AIFNFGDSNSDTGGISAALYPINWPYGQTYFHMPAGRFSDGRLIIDFIAESFGLPYLSAYLDSVGTNFSHGANFATGGST 121 (331)
Q Consensus 42 ~l~vFGDSlsD~Gn~~~~~~~~~~Pyg~~~~~~p~gRfsnG~~~~d~la~~lg~~~~ppyl~~~~~~~~~G~NfA~gGA~ 121 (331)
+|++||||+++ |.... +....+..|++.+++.+..+. + -..-.|.+.+|++
T Consensus 1 ~i~~~GDSit~-G~~~~------------------~~~~~~~~~~~~l~~~l~~~~-~---------~~~~~N~g~~G~~ 51 (185)
T cd01832 1 RYVALGDSITE-GVGDP------------------VPDGGYRGWADRLAAALAAAD-P---------GIEYANLAVRGRR 51 (185)
T ss_pred CeeEecchhhc-ccCCC------------------CCCCccccHHHHHHHHhcccC-C---------CceEeeccCCcch
Confidence 47899999877 33210 111246789999999985421 0 0123699999987
Q ss_pred ccCCCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHhhcCCcccCCCcHHhhccCcEEEEEecchhhhhhhhcCCChh
Q 020056 122 IRVPDRILPTNEGFGFSPFYLDIQLSQFMLFKSRSQMIRQRGGIYASLMPQEEYFSQALYTFDIGQNDFTADLFADMPIE 201 (331)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~l~~Qi~~f~~~~~~~~~~~g~~~~~~~~~~~~~~~~~sL~~v~iG~ND~~~~~~~~~s~~ 201 (331)
+.. .+..|+..- . . ..-.+++|++|.||.... ..+
T Consensus 52 ~~~----------------~~~~~~~~~---~--------------------~-~~~d~vii~~G~ND~~~~---~~~-- 86 (185)
T cd01832 52 TAQ----------------ILAEQLPAA---L--------------------A-LRPDLVTLLAGGNDILRP---GTD-- 86 (185)
T ss_pred HHH----------------HHHHHHHHH---H--------------------h-cCCCEEEEeccccccccC---CCC--
Confidence 521 012222110 0 0 134688999999998641 112
Q ss_pred hhhccHHHHHHHHHHhHHHHHHcCCcEEEEecCCcC-CcccchhccCCCCCCCCCCCCCchhhhHHHHHHHHHHHHHHHH
Q 020056 202 KIYASVPDVINSFAYNVKSIYNSGGRSFWIHNTGPL-GCYAFVFLYSPSAPALKDSAGCVKPYNELAQYFNLKLKEAVVQ 280 (331)
Q Consensus 202 ~~~~~v~~~v~~i~~~v~~L~~~GAr~~vV~nlppl-gc~P~~~~~~~~~~~~~d~~~c~~~~n~l~~~~N~~L~~~l~~ 280 (331)
..+..+++...|+++...+++ ++++++||. +..|. ....+.....+|+.|++..++
T Consensus 87 -----~~~~~~~~~~~i~~i~~~~~~-vil~~~~~~~~~~~~-----------------~~~~~~~~~~~n~~l~~~a~~ 143 (185)
T cd01832 87 -----PDTYRADLEEAVRRLRAAGAR-VVVFTIPDPAVLEPF-----------------RRRVRARLAAYNAVIRAVAAR 143 (185)
T ss_pred -----HHHHHHHHHHHHHHHHhCCCE-EEEecCCCccccchh-----------------HHHHHHHHHHHHHHHHHHHHH
Confidence 234455666666766666775 777888887 21111 112334567788777665543
Q ss_pred HHHhCCCcEEEEEecchHHH
Q 020056 281 LRKAFPSAAFTYVDVYSIKY 300 (331)
Q Consensus 281 l~~~~~~~~i~~~D~~~~~~ 300 (331)
+ .+.++|++..+.
T Consensus 144 ----~---~v~~vd~~~~~~ 156 (185)
T cd01832 144 ----Y---GAVHVDLWEHPE 156 (185)
T ss_pred ----c---CCEEEecccCcc
Confidence 2 467889887653
No 11
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases. FeeA and FeeB are part of a biosynthetic gene cluster and may participate in the biosynthesis of long-chain N-acyltyrosines by providing saturated and unsaturated fatty acids, which it turn are loaded onto the acyl carrier protein FeeL. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.27 E-value=1.2e-05 Score=69.80 Aligned_cols=95 Identities=17% Similarity=0.138 Sum_probs=59.3
Q ss_pred cCcEEEEEecchhhhhhhhcCCChhhhhccHHHHHHHHHHhHHHHHH-cCCcEEEEecCCcCCcccchhccCCCCCCCCC
Q 020056 177 SQALYTFDIGQNDFTADLFADMPIEKIYASVPDVINSFAYNVKSIYN-SGGRSFWIHNTGPLGCYAFVFLYSPSAPALKD 255 (331)
Q Consensus 177 ~~sL~~v~iG~ND~~~~~~~~~s~~~~~~~v~~~v~~i~~~v~~L~~-~GAr~~vV~nlpplgc~P~~~~~~~~~~~~~d 255 (331)
.-++++|.+|+||+... .+ ..+...++.+.++++.+ ....+|+|.++||+++.|....
T Consensus 67 ~pd~Vii~~G~ND~~~~----~~-------~~~~~~~l~~li~~i~~~~~~~~iiv~~~p~~~~~~~~~~---------- 125 (191)
T cd01836 67 RFDVAVISIGVNDVTHL----TS-------IARWRKQLAELVDALRAKFPGARVVVTAVPPLGRFPALPQ---------- 125 (191)
T ss_pred CCCEEEEEecccCcCCC----CC-------HHHHHHHHHHHHHHHHhhCCCCEEEEECCCCcccCCCCcH----------
Confidence 45789999999998642 11 23455666666676665 3556799999999876543211
Q ss_pred CCCCchhhhHHHHHHHHHHHHHHHHHHHhCCCcEEEEEecchHHH
Q 020056 256 SAGCVKPYNELAQYFNLKLKEAVVQLRKAFPSAAFTYVDVYSIKY 300 (331)
Q Consensus 256 ~~~c~~~~n~l~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~ 300 (331)
.....+++..+.+|+.+++.. ++++ .+.++|++..+.
T Consensus 126 --~~~~~~~~~~~~~n~~~~~~a----~~~~--~~~~id~~~~~~ 162 (191)
T cd01836 126 --PLRWLLGRRARLLNRALERLA----SEAP--RVTLLPATGPLF 162 (191)
T ss_pred --HHHHHHHHHHHHHHHHHHHHH----hcCC--CeEEEecCCccc
Confidence 112334555667776665544 3443 456779887763
No 12
>cd04501 SGNH_hydrolase_like_4 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=98.23 E-value=4e-05 Score=66.03 Aligned_cols=94 Identities=15% Similarity=0.109 Sum_probs=57.1
Q ss_pred cCcEEEEEecchhhhhhhhcCCChhhhhccHHHHHHHHHHhHHHHHHcCCcEEEEecCCcCCcccchhccCCCCCCCCCC
Q 020056 177 SQALYTFDIGQNDFTADLFADMPIEKIYASVPDVINSFAYNVKSIYNSGGRSFWIHNTGPLGCYAFVFLYSPSAPALKDS 256 (331)
Q Consensus 177 ~~sL~~v~iG~ND~~~~~~~~~s~~~~~~~v~~~v~~i~~~v~~L~~~GAr~~vV~nlpplgc~P~~~~~~~~~~~~~d~ 256 (331)
.-+++++.+|.||.... .+. .+..+.+.+.|+.+.+.|++ ++++..+|....+...
T Consensus 59 ~~d~v~i~~G~ND~~~~----~~~-------~~~~~~~~~li~~~~~~~~~-~il~~~~p~~~~~~~~------------ 114 (183)
T cd04501 59 KPAVVIIMGGTNDIIVN----TSL-------EMIKDNIRSMVELAEANGIK-VILASPLPVDDYPWKP------------ 114 (183)
T ss_pred CCCEEEEEeccCccccC----CCH-------HHHHHHHHHHHHHHHHCCCc-EEEEeCCCcCccccch------------
Confidence 34788999999998642 121 24455666667777777876 5556666654322110
Q ss_pred CCCchhhhHHHHHHHHHHHHHHHHHHHhCCCcEEEEEecchHHHHHH
Q 020056 257 AGCVKPYNELAQYFNLKLKEAVVQLRKAFPSAAFTYVDVYSIKYSLF 303 (331)
Q Consensus 257 ~~c~~~~n~l~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~ii 303 (331)
+....++....||+.+++..++ . .+.++|++..+.+.-
T Consensus 115 --~~~~~~~~~~~~n~~~~~~a~~----~---~v~~vd~~~~~~~~~ 152 (183)
T cd04501 115 --QWLRPANKLKSLNRWLKDYARE----N---GLLFLDFYSPLLDER 152 (183)
T ss_pred --hhcchHHHHHHHHHHHHHHHHH----c---CCCEEechhhhhccc
Confidence 1123345566788777655433 2 467899998877643
No 13
>cd01844 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.09 E-value=8.6e-05 Score=63.86 Aligned_cols=91 Identities=18% Similarity=0.117 Sum_probs=52.7
Q ss_pred cCcEEEEEecchhhhhhhhcCCChhhhhccHHHHHHHHHHhHHHHHHcCC-cEEEEecCCcCCcccchhccCCCCCCCCC
Q 020056 177 SQALYTFDIGQNDFTADLFADMPIEKIYASVPDVINSFAYNVKSIYNSGG-RSFWIHNTGPLGCYAFVFLYSPSAPALKD 255 (331)
Q Consensus 177 ~~sL~~v~iG~ND~~~~~~~~~s~~~~~~~v~~~v~~i~~~v~~L~~~GA-r~~vV~nlpplgc~P~~~~~~~~~~~~~d 255 (331)
.-.++++.+|.||.... .+..+++...+++|.+..- .+|++++.||. |......
T Consensus 57 ~pd~vii~~G~ND~~~~--------------~~~~~~~~~~i~~i~~~~p~~~iil~~~~~~---~~~~~~~-------- 111 (177)
T cd01844 57 PADLYIIDCGPNIVGAE--------------AMVRERLGPLVKGLRETHPDTPILLVSPRYC---PDAELTP-------- 111 (177)
T ss_pred CCCEEEEEeccCCCccH--------------HHHHHHHHHHHHHHHHHCcCCCEEEEecCCC---CccccCc--------
Confidence 35788999999996431 1456777788888887653 45777777764 2211110
Q ss_pred CCCCchhhhHHHHHHHHHHHHHHHHHHHhCCCcEEEEEecchHH
Q 020056 256 SAGCVKPYNELAQYFNLKLKEAVVQLRKAFPSAAFTYVDVYSIK 299 (331)
Q Consensus 256 ~~~c~~~~n~l~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~ 299 (331)
......++....+|+. ++++.++ ..-++.++|.+.++
T Consensus 112 --~~~~~~~~~~~~~~~~----~~~~~~~-~~~~v~~id~~~~~ 148 (177)
T cd01844 112 --GRGKLTLAVRRALREA----FEKLRAD-GVPNLYYLDGEELL 148 (177)
T ss_pred --chhHHHHHHHHHHHHH----HHHHHhc-CCCCEEEecchhhc
Confidence 1222334444444444 4444433 23467889987655
No 14
>cd01830 XynE_like SGNH_hydrolase subfamily, similar to the putative arylesterase/acylhydrolase from the rumen anaerobe Prevotella bryantii XynE. The P. bryantii XynE gene is located in a xylanase gene cluster. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=97.97 E-value=0.00017 Score=63.61 Aligned_cols=57 Identities=14% Similarity=0.110 Sum_probs=37.1
Q ss_pred CcEEEEEecchhhhhhhhcCCChhhhhccHHHHHHHHHHhHHHHHHcCCcEEEEecCCcCC
Q 020056 178 QALYTFDIGQNDFTADLFADMPIEKIYASVPDVINSFAYNVKSIYNSGGRSFWIHNTGPLG 238 (331)
Q Consensus 178 ~sL~~v~iG~ND~~~~~~~~~s~~~~~~~v~~~v~~i~~~v~~L~~~GAr~~vV~nlpplg 238 (331)
-.+++|++|.||...... ... .....+.+...++.+.++++.+.|++ +++.++||..
T Consensus 75 p~~vii~~G~ND~~~~~~-~~~--~~~~~~~~~~~~l~~ii~~~~~~~~~-vil~t~~P~~ 131 (204)
T cd01830 75 VRTVIILEGVNDIGASGT-DFA--AAPVTAEELIAGYRQLIRRAHARGIK-VIGATITPFE 131 (204)
T ss_pred CCEEEEeccccccccccc-ccc--cCCCCHHHHHHHHHHHHHHHHHCCCe-EEEecCCCCC
Confidence 357889999999864311 110 11122346677788888888888874 7778888754
No 15
>cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=97.95 E-value=0.00023 Score=61.20 Aligned_cols=102 Identities=9% Similarity=0.092 Sum_probs=63.3
Q ss_pred CcEEEEEecchhhhhhhhcCCChhhhhccHHHHHHHHHHhHHHHH-HcCCcEEEEecCCcCCcccchhccCCCCCCCCCC
Q 020056 178 QALYTFDIGQNDFTADLFADMPIEKIYASVPDVINSFAYNVKSIY-NSGGRSFWIHNTGPLGCYAFVFLYSPSAPALKDS 256 (331)
Q Consensus 178 ~sL~~v~iG~ND~~~~~~~~~s~~~~~~~v~~~v~~i~~~v~~L~-~~GAr~~vV~nlpplgc~P~~~~~~~~~~~~~d~ 256 (331)
-.+++|++|.||....+.... ...+...++.+.|+.|. .....+|++++.+|....+...
T Consensus 62 ~d~v~l~~G~ND~~~~~~~~~-------~~~~~~~~l~~~v~~~~~~~~~~~ii~~~p~~~~~~~~~~------------ 122 (191)
T cd01834 62 PDVVSIMFGINDSFRGFDDPV-------GLEKFKTNLRRLIDRLKNKESAPRIVLVSPIAYEANEDPL------------ 122 (191)
T ss_pred CCEEEEEeecchHhhcccccc-------cHHHHHHHHHHHHHHHHcccCCCcEEEECCcccCCCCCCC------------
Confidence 478999999999986321011 12345667777777775 3344567777766644221100
Q ss_pred CCCchhhhHHHHHHHHHHHHHHHHHHHhCCCcEEEEEecchHHHHHHHCC
Q 020056 257 AGCVKPYNELAQYFNLKLKEAVVQLRKAFPSAAFTYVDVYSIKYSLFKEP 306 (331)
Q Consensus 257 ~~c~~~~n~l~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~ii~nP 306 (331)
.-....+.....||+.|++..++ + .+.++|++..+.+....+
T Consensus 123 -~~~~~~~~~~~~~n~~l~~~a~~----~---~~~~iD~~~~~~~~~~~~ 164 (191)
T cd01834 123 -PDGAEYNANLAAYADAVRELAAE----N---GVAFVDLFTPMKEAFQKA 164 (191)
T ss_pred -CChHHHHHHHHHHHHHHHHHHHH----c---CCeEEecHHHHHHHHHhC
Confidence 01245666777888888765432 2 367899999998876653
No 16
>PF13472 Lipase_GDSL_2: GDSL-like Lipase/Acylhydrolase family; PDB: 1ES9_A 1WAB_A 3DT9_A 1BWQ_A 1FXW_A 3DT6_A 1BWR_A 3DT8_A 1BWP_A 2WAA_A ....
Probab=97.95 E-value=0.00014 Score=61.03 Aligned_cols=95 Identities=15% Similarity=0.193 Sum_probs=58.1
Q ss_pred cCcEEEEEecchhhhhhhhcCCChhhhhccHHHHHHHHHHhHHHHHHcCCcEEEEecCCcCCcccchhccCCCCCCCCCC
Q 020056 177 SQALYTFDIGQNDFTADLFADMPIEKIYASVPDVINSFAYNVKSIYNSGGRSFWIHNTGPLGCYAFVFLYSPSAPALKDS 256 (331)
Q Consensus 177 ~~sL~~v~iG~ND~~~~~~~~~s~~~~~~~v~~~v~~i~~~v~~L~~~GAr~~vV~nlpplgc~P~~~~~~~~~~~~~d~ 256 (331)
.-++++|.+|+||.... . .......+..+.+.+.|+.+...+ +++++.+||..-.+..
T Consensus 61 ~~d~vvi~~G~ND~~~~---~----~~~~~~~~~~~~l~~~i~~~~~~~--~vi~~~~~~~~~~~~~------------- 118 (179)
T PF13472_consen 61 KPDLVVISFGTNDVLNG---D----ENDTSPEQYEQNLRRIIEQLRPHG--PVILVSPPPRGPDPRD------------- 118 (179)
T ss_dssp TCSEEEEE--HHHHCTC---T----TCHHHHHHHHHHHHHHHHHHHTTS--EEEEEE-SCSSSSTTT-------------
T ss_pred CCCEEEEEccccccccc---c----cccccHHHHHHHHHHHHHhhcccC--cEEEecCCCccccccc-------------
Confidence 34689999999999762 1 112233556777777788887777 8888888875532111
Q ss_pred CCCchhhhHHHHHHHHHHHHHHHHHHHhCCCcEEEEEecchHHHH
Q 020056 257 AGCVKPYNELAQYFNLKLKEAVVQLRKAFPSAAFTYVDVYSIKYS 301 (331)
Q Consensus 257 ~~c~~~~n~l~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~ 301 (331)
.+..........+|+.+++.. +++ .+.++|++..+.+
T Consensus 119 -~~~~~~~~~~~~~~~~~~~~a----~~~---~~~~id~~~~~~~ 155 (179)
T PF13472_consen 119 -PKQDYLNRRIDRYNQAIRELA----KKY---GVPFIDLFDAFDD 155 (179)
T ss_dssp -THTTCHHHHHHHHHHHHHHHH----HHC---TEEEEEHHHHHBT
T ss_pred -ccchhhhhhHHHHHHHHHHHH----HHc---CCEEEECHHHHcc
Confidence 112344555667787776544 333 5678999888654
No 17
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=97.93 E-value=0.00027 Score=61.06 Aligned_cols=53 Identities=13% Similarity=0.096 Sum_probs=33.1
Q ss_pred cCcEEEEEecchhhhhhhhcCCChhhhhccHHHHHHHHHHhHHHHHHcCC-cEEEEecCCcCC
Q 020056 177 SQALYTFDIGQNDFTADLFADMPIEKIYASVPDVINSFAYNVKSIYNSGG-RSFWIHNTGPLG 238 (331)
Q Consensus 177 ~~sL~~v~iG~ND~~~~~~~~~s~~~~~~~v~~~v~~i~~~v~~L~~~GA-r~~vV~nlpplg 238 (331)
.-++++|++|.||..... ..+ ..+...++.+.|+++.+.+. .++++++.||..
T Consensus 67 ~pd~Vii~~G~ND~~~~~--~~~-------~~~~~~~l~~li~~i~~~~~~~~iil~t~~p~~ 120 (188)
T cd01827 67 NPNIVIIKLGTNDAKPQN--WKY-------KDDFKKDYETMIDSFQALPSKPKIYICYPIPAY 120 (188)
T ss_pred CCCEEEEEcccCCCCCCC--Ccc-------HHHHHHHHHHHHHHHHHHCCCCeEEEEeCCccc
Confidence 357899999999986421 111 12334566666666666553 467787777643
No 18
>cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins. SGNH_hydrolase subfamily similar to the Saccharomyces cerevisiae IAH1. IAH1 may be the major esterase that hydrolyses isoamyl acetate in sake mash. The SGNH-family of hydrolases is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases
Probab=97.92 E-value=0.0002 Score=62.02 Aligned_cols=104 Identities=13% Similarity=0.076 Sum_probs=57.8
Q ss_pred cCcEEEEEecchhhhhhhhcCCChhhhhccHHHHHHHHHHhHHHHHH--cCCcEEEEecCCcCCcccchhccCCCCCCCC
Q 020056 177 SQALYTFDIGQNDFTADLFADMPIEKIYASVPDVINSFAYNVKSIYN--SGGRSFWIHNTGPLGCYAFVFLYSPSAPALK 254 (331)
Q Consensus 177 ~~sL~~v~iG~ND~~~~~~~~~s~~~~~~~v~~~v~~i~~~v~~L~~--~GAr~~vV~nlpplgc~P~~~~~~~~~~~~~ 254 (331)
.-++++|++|.||..... .. ...-.....+++.+.|+++.+ .++ ++++++.||............
T Consensus 63 ~pd~vii~~G~ND~~~~~--~~----~~~~~~~~~~~~~~~i~~~~~~~~~~-~ii~~t~~~~~~~~~~~~~~~------ 129 (199)
T cd01838 63 QPDLVTIFFGANDAALPG--QP----QHVPLDEYKENLRKIVSHLKSLSPKT-KVILITPPPVDEEAWEKSLED------ 129 (199)
T ss_pred CceEEEEEecCccccCCC--CC----CcccHHHHHHHHHHHHHHHHhhCCCC-eEEEeCCCCCCHHHHhhhhcc------
Confidence 567899999999987531 10 000123344555555555555 455 577778887653321110000
Q ss_pred CCCCCchhhhHHHHHHHHHHHHHHHHHHHhCCCcEEEEEecchHHHH
Q 020056 255 DSAGCVKPYNELAQYFNLKLKEAVVQLRKAFPSAAFTYVDVYSIKYS 301 (331)
Q Consensus 255 d~~~c~~~~n~l~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~ 301 (331)
........++..+.||+.+++..+ ++ .+.++|++..+..
T Consensus 130 -~~~~~~~~~~~~~~~~~~~~~~a~----~~---~~~~iD~~~~~~~ 168 (199)
T cd01838 130 -GGSQPGRTNELLKQYAEACVEVAE----EL---GVPVIDLWTAMQE 168 (199)
T ss_pred -ccCCccccHHHHHHHHHHHHHHHH----Hh---CCcEEEHHHHHHh
Confidence 001234456667788877765443 33 3667899887764
No 19
>cd01821 Rhamnogalacturan_acetylesterase_like Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria.
Probab=97.92 E-value=9.5e-05 Score=64.68 Aligned_cols=97 Identities=7% Similarity=0.014 Sum_probs=56.6
Q ss_pred cCcEEEEEecchhhhhhhhcCCChhhhhccHHHHHHHHHHhHHHHHHcCCcEEEEecCCcCCcccchhccCCCCCCCCCC
Q 020056 177 SQALYTFDIGQNDFTADLFADMPIEKIYASVPDVINSFAYNVKSIYNSGGRSFWIHNTGPLGCYAFVFLYSPSAPALKDS 256 (331)
Q Consensus 177 ~~sL~~v~iG~ND~~~~~~~~~s~~~~~~~v~~~v~~i~~~v~~L~~~GAr~~vV~nlpplgc~P~~~~~~~~~~~~~d~ 256 (331)
.-++++|.+|.||....... ...-+.+..+++.+.|+++.+.|++ +++++.||.. ...
T Consensus 65 ~pdlVii~~G~ND~~~~~~~------~~~~~~~~~~nl~~ii~~~~~~~~~-~il~tp~~~~-------~~~-------- 122 (198)
T cd01821 65 PGDYVLIQFGHNDQKPKDPE------YTEPYTTYKEYLRRYIAEARAKGAT-PILVTPVTRR-------TFD-------- 122 (198)
T ss_pred CCCEEEEECCCCCCCCCCCC------CCCcHHHHHHHHHHHHHHHHHCCCe-EEEECCcccc-------ccC--------
Confidence 35889999999998642100 0111345566777777777788886 5555655421 111
Q ss_pred CCCchhhhHHHHHHHHHHHHHHHHHHHhCCCcEEEEEecchHHHHHHH
Q 020056 257 AGCVKPYNELAQYFNLKLKEAVVQLRKAFPSAAFTYVDVYSIKYSLFK 304 (331)
Q Consensus 257 ~~c~~~~n~l~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~ii~ 304 (331)
.+. ..+.....||+.+++..+ ++ .+.++|++..+.+..+
T Consensus 123 -~~~-~~~~~~~~~~~~~~~~a~----~~---~~~~vD~~~~~~~~~~ 161 (198)
T cd01821 123 -EGG-KVEDTLGDYPAAMRELAA----EE---GVPLIDLNAASRALYE 161 (198)
T ss_pred -CCC-cccccchhHHHHHHHHHH----Hh---CCCEEecHHHHHHHHH
Confidence 000 122334567777665544 33 3567999999877654
No 20
>cd01825 SGNH_hydrolase_peri1 SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=97.91 E-value=6.6e-05 Score=64.76 Aligned_cols=92 Identities=9% Similarity=-0.022 Sum_probs=52.7
Q ss_pred CcEEEEEecchhhhhhhhcCCChhhhhccHHHHHHHHHHhHHHHHHc-CCcEEEEecCCcCCcccchhccCCCCCCCCCC
Q 020056 178 QALYTFDIGQNDFTADLFADMPIEKIYASVPDVINSFAYNVKSIYNS-GGRSFWIHNTGPLGCYAFVFLYSPSAPALKDS 256 (331)
Q Consensus 178 ~sL~~v~iG~ND~~~~~~~~~s~~~~~~~v~~~v~~i~~~v~~L~~~-GAr~~vV~nlpplgc~P~~~~~~~~~~~~~d~ 256 (331)
-++++|.+|.||.... ..+ .....+++...|+++.+. ...++++++.||....+..
T Consensus 57 pd~Vii~~G~ND~~~~---~~~-------~~~~~~~~~~li~~i~~~~~~~~iv~~~~~~~~~~~~~------------- 113 (189)
T cd01825 57 PDLVILSYGTNEAFNK---QLN-------ASEYRQQLREFIKRLRQILPNASILLVGPPDSLQKTGA------------- 113 (189)
T ss_pred CCEEEEECCCcccccC---CCC-------HHHHHHHHHHHHHHHHHHCCCCeEEEEcCCchhccCCC-------------
Confidence 4688999999997542 112 234456666667777663 4556888887764322110
Q ss_pred CCCchhhhHHHHHHHHHHHHHHHHHHHhCCCcEEEEEecchHHHH
Q 020056 257 AGCVKPYNELAQYFNLKLKEAVVQLRKAFPSAAFTYVDVYSIKYS 301 (331)
Q Consensus 257 ~~c~~~~n~l~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~ 301 (331)
+....+.....+|..+++. .+++ + +.++|++..+..
T Consensus 114 --~~~~~~~~~~~~~~~~~~~----a~~~-~--v~~vd~~~~~~~ 149 (189)
T cd01825 114 --GRWRTPPGLDAVIAAQRRV----AKEE-G--IAFWDLYAAMGG 149 (189)
T ss_pred --CCcccCCcHHHHHHHHHHH----HHHc-C--CeEEeHHHHhCC
Confidence 1111122345666555554 3443 2 668999887643
No 21
>cd04506 SGNH_hydrolase_YpmR_like Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. This subfamily contains sequences similar to Bacillus YpmR.
Probab=97.80 E-value=0.00069 Score=59.37 Aligned_cols=104 Identities=14% Similarity=0.234 Sum_probs=60.5
Q ss_pred cCcEEEEEecchhhhhhhhcCC---ChhhhhccHHHHHHHHHHhHHHHHHcCC-cEEEEecCCcCCcccchhccCCCCCC
Q 020056 177 SQALYTFDIGQNDFTADLFADM---PIEKIYASVPDVINSFAYNVKSIYNSGG-RSFWIHNTGPLGCYAFVFLYSPSAPA 252 (331)
Q Consensus 177 ~~sL~~v~iG~ND~~~~~~~~~---s~~~~~~~v~~~v~~i~~~v~~L~~~GA-r~~vV~nlpplgc~P~~~~~~~~~~~ 252 (331)
.-.+++|.+|+||+........ ...+...-......++.+.|+++.+.+. .+|+|+++++ |..... .
T Consensus 68 ~~d~V~i~~G~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ir~~~p~~~Ivv~~~~~----p~~~~~-~---- 138 (204)
T cd04506 68 KADVITITIGGNDLMQVLEKNFLSLDVEDFKKAEETYQNNLKKIFKEIRKLNPDAPIFLVGLYN----PFYVYF-P---- 138 (204)
T ss_pred cCCEEEEEecchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEEEecCC----cccccc-c----
Confidence 4578999999999986532111 1112222234556677777777777653 3577776531 111111 0
Q ss_pred CCCCCCCchhhhHHHHHHHHHHHHHHHHHHHhCCCcEEEEEecchHHHH
Q 020056 253 LKDSAGCVKPYNELAQYFNLKLKEAVVQLRKAFPSAAFTYVDVYSIKYS 301 (331)
Q Consensus 253 ~~d~~~c~~~~n~l~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~ 301 (331)
-...+++.+..||+.+++..+ ++ -++.++|++..+..
T Consensus 139 ------~~~~~~~~~~~~n~~~~~~a~----~~--~~v~~vd~~~~~~~ 175 (204)
T cd04506 139 ------NITEINDIVNDWNEASQKLAS----QY--KNAYFVPIFDLFSD 175 (204)
T ss_pred ------hHHHHHHHHHHHHHHHHHHHH----hC--CCeEEEehHHhhcC
Confidence 112456778888987766543 22 24778999887764
No 22
>PRK10528 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; Provisional
Probab=97.73 E-value=0.00048 Score=60.21 Aligned_cols=44 Identities=9% Similarity=0.206 Sum_probs=31.1
Q ss_pred cCcEEEEEecchhhhhhhhcCCChhhhhccHHHHHHHHHHhHHHHHHcCCcEEEE
Q 020056 177 SQALYTFDIGQNDFTADLFADMPIEKIYASVPDVINSFAYNVKSIYNSGGRSFWI 231 (331)
Q Consensus 177 ~~sL~~v~iG~ND~~~~~~~~~s~~~~~~~v~~~v~~i~~~v~~L~~~GAr~~vV 231 (331)
.-+++++.+|.||... ..+ ..+..+++.+-++++.+.|++.+++
T Consensus 71 ~pd~Vii~~GtND~~~----~~~-------~~~~~~~l~~li~~~~~~~~~~ill 114 (191)
T PRK10528 71 QPRWVLVELGGNDGLR----GFP-------PQQTEQTLRQIIQDVKAANAQPLLM 114 (191)
T ss_pred CCCEEEEEeccCcCcc----CCC-------HHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 3478999999999753 222 2355667777777777888887766
No 23
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases. E. coli NnaC appears to be involved in polysaccharide synthesis.
Probab=97.69 E-value=0.00067 Score=57.82 Aligned_cols=91 Identities=14% Similarity=0.166 Sum_probs=58.4
Q ss_pred cCcEEEEEecchhhhhhhhcCCChhhhhccHHHHHHHHHHhHHHHHHc-CCcEEEEecCCcCCcccchhccCCCCCCCCC
Q 020056 177 SQALYTFDIGQNDFTADLFADMPIEKIYASVPDVINSFAYNVKSIYNS-GGRSFWIHNTGPLGCYAFVFLYSPSAPALKD 255 (331)
Q Consensus 177 ~~sL~~v~iG~ND~~~~~~~~~s~~~~~~~v~~~v~~i~~~v~~L~~~-GAr~~vV~nlpplgc~P~~~~~~~~~~~~~d 255 (331)
.-.+++|++|+||.... .+ ..+..+++.+.++++.+. ...+++++++||..-.+.
T Consensus 51 ~pd~v~i~~G~ND~~~~----~~-------~~~~~~~~~~l~~~~~~~~p~~~vi~~~~~p~~~~~~------------- 106 (174)
T cd01841 51 NPSKVFLFLGTNDIGKE----VS-------SNQFIKWYRDIIEQIREEFPNTKIYLLSVLPVLEEDE------------- 106 (174)
T ss_pred CCCEEEEEeccccCCCC----CC-------HHHHHHHHHHHHHHHHHHCCCCEEEEEeeCCcCcccc-------------
Confidence 34778999999998642 22 234566777777777664 456788899888643221
Q ss_pred CCCCchhhhHHHHHHHHHHHHHHHHHHHhCCCcEEEEEecchHHHH
Q 020056 256 SAGCVKPYNELAQYFNLKLKEAVVQLRKAFPSAAFTYVDVYSIKYS 301 (331)
Q Consensus 256 ~~~c~~~~n~l~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~ 301 (331)
+....+.....||+.+++..++ + .+.++|++..+.+
T Consensus 107 ---~~~~~~~~~~~~n~~l~~~a~~----~---~~~~id~~~~~~~ 142 (174)
T cd01841 107 ---IKTRSNTRIQRLNDAIKELAPE----L---GVTFIDLNDVLVD 142 (174)
T ss_pred ---cccCCHHHHHHHHHHHHHHHHH----C---CCEEEEcHHHHcC
Confidence 1122345567888888765433 3 2678999988753
No 24
>cd01835 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=97.55 E-value=0.0026 Score=55.23 Aligned_cols=93 Identities=10% Similarity=0.071 Sum_probs=48.3
Q ss_pred cCcEEEEEecchhhhhhhhcCCChhhhhccHHHHHHHHHHhHHHHHHcCCcEEEEecCCcCCcccchhccCCCCCCCCCC
Q 020056 177 SQALYTFDIGQNDFTADLFADMPIEKIYASVPDVINSFAYNVKSIYNSGGRSFWIHNTGPLGCYAFVFLYSPSAPALKDS 256 (331)
Q Consensus 177 ~~sL~~v~iG~ND~~~~~~~~~s~~~~~~~v~~~v~~i~~~v~~L~~~GAr~~vV~nlpplgc~P~~~~~~~~~~~~~d~ 256 (331)
.-++++|.+|.||...... .... ....+..+.+.+.++++ +.++ +++++++||.... .
T Consensus 69 ~pd~V~i~~G~ND~~~~~~-~~~~----~~~~~~~~~~~~ii~~~-~~~~-~vi~~~~~p~~~~-----~---------- 126 (193)
T cd01835 69 VPNRLVLSVGLNDTARGGR-KRPQ----LSARAFLFGLNQLLEEA-KRLV-PVLVVGPTPVDEA-----K---------- 126 (193)
T ss_pred CCCEEEEEecCcccccccC-cccc----cCHHHHHHHHHHHHHHH-hcCC-cEEEEeCCCcccc-----c----------
Confidence 4588999999999975311 0000 01112222232222222 2344 4778787765311 0
Q ss_pred CCCchhhhHHHHHHHHHHHHHHHHHHHhCCCcEEEEEecchHHHH
Q 020056 257 AGCVKPYNELAQYFNLKLKEAVVQLRKAFPSAAFTYVDVYSIKYS 301 (331)
Q Consensus 257 ~~c~~~~n~l~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~ 301 (331)
....+.....+|+.+++..+ ++ .+.++|++..+.+
T Consensus 127 ---~~~~~~~~~~~n~~~~~~a~----~~---~~~~vd~~~~~~~ 161 (193)
T cd01835 127 ---MPYSNRRIARLETAFAEVCL----RR---DVPFLDTFTPLLN 161 (193)
T ss_pred ---cchhhHHHHHHHHHHHHHHH----Hc---CCCeEeCccchhc
Confidence 01223455667777765543 32 3567899877654
No 25
>cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases. The best characterized member in this family is TesA, an E. coli periplasmic protein with thioesterase, esterase, arylesterase, protease and lysophospholipase activity.
Probab=97.46 E-value=0.0037 Score=53.14 Aligned_cols=46 Identities=13% Similarity=0.211 Sum_probs=30.3
Q ss_pred cCcEEEEEecchhhhhhhhcCCChhhhhccHHHHHHHHHHhHHHHHHcCCcEEEEecC
Q 020056 177 SQALYTFDIGQNDFTADLFADMPIEKIYASVPDVINSFAYNVKSIYNSGGRSFWIHNT 234 (331)
Q Consensus 177 ~~sL~~v~iG~ND~~~~~~~~~s~~~~~~~v~~~v~~i~~~v~~L~~~GAr~~vV~nl 234 (331)
.-.+++|.+|.||.... .+. .+...++.+.++++.+.|++ ++++++
T Consensus 64 ~pd~v~i~~G~ND~~~~----~~~-------~~~~~~l~~li~~~~~~~~~-vil~~~ 109 (177)
T cd01822 64 KPDLVILELGGNDGLRG----IPP-------DQTRANLRQMIETAQARGAP-VLLVGM 109 (177)
T ss_pred CCCEEEEeccCcccccC----CCH-------HHHHHHHHHHHHHHHHCCCe-EEEEec
Confidence 34689999999997532 221 24456677777777777876 555554
No 26
>cd01824 Phospholipase_B_like Phospholipase-B_like. This subgroup of the SGNH-family of lipolytic enzymes may have both esterase and phospholipase-A/lysophospholipase activity. It's members may be involved in the conversion of phosphatidylcholine to fatty acids and glycerophosphocholine, perhaps in the context of dietary lipid uptake. Members may be membrane proteins. The tertiary fold of the SGNH-hydrolases is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; Its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases.
Probab=97.45 E-value=0.011 Score=55.35 Aligned_cols=222 Identities=14% Similarity=0.064 Sum_probs=109.7
Q ss_pred CCCCEEEEcCCcccccCCCCC---CCCCCCCCC-CCCCCCCCCccCCCCchHHHHHHhhcCCCCCCCccccCC--CCCCC
Q 020056 38 CNFPAIFNFGDSNSDTGGISA---ALYPINWPY-GQTYFHMPAGRFSDGRLIIDFIAESFGLPYLSAYLDSVG--TNFSH 111 (331)
Q Consensus 38 ~~~~~l~vFGDSlsD~Gn~~~---~~~~~~~Py-g~~~~~~p~gRfsnG~~~~d~la~~lg~~~~ppyl~~~~--~~~~~ 111 (331)
.+|+-|-.+|||++= |+-.. .... ...| |..|...-.+.+.+=.+.+.+|-+. +-.+ .-|....+ .....
T Consensus 8 ~DI~viaA~GDSlta-g~ga~~~~~~~~-~~e~rG~s~~~Gg~~~~~~~~Tlpnil~~f-np~l-~G~s~~~~~~~~~~~ 83 (288)
T cd01824 8 GDIKVIAALGDSLTA-GNGAGSANNLDL-LTEYRGLSWSIGGDSTLRGLTTLPNILREF-NPSL-YGYSVGTGDETLPDS 83 (288)
T ss_pred ccCeEEeeccccccc-cCCCCCCCcccc-ccccCCceEecCCcccccccccHHHHHHHh-CCCc-ccccCCCCCCCCccc
Confidence 579999999999873 33211 0000 0001 2222211122333445566665443 1111 01111111 11224
Q ss_pred cceecccCCcccCCCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHhhcCCcccCCCcHHhhc-cCcEEEEEecchhh
Q 020056 112 GANFATGGSTIRVPDRILPTNEGFGFSPFYLDIQLSQFMLFKSRSQMIRQRGGIYASLMPQEEYF-SQALYTFDIGQNDF 190 (331)
Q Consensus 112 G~NfA~gGA~~~~~~~~~~~~~~~~~~~~~l~~Qi~~f~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~sL~~v~iG~ND~ 190 (331)
..|+|+.|+++. +|..|++...+..++- . .-... .=.|++|+||+||+
T Consensus 84 ~~N~av~Ga~s~-----------------dL~~qa~~lv~r~~~~-----~---------~i~~~~dwklVtI~IG~ND~ 132 (288)
T cd01824 84 GFNVAEPGAKSE-----------------DLPQQARLLVRRMKKD-----P---------RVDFKNDWKLITIFIGGNDL 132 (288)
T ss_pred ceeecccCcchh-----------------hHHHHHHHHHHHHhhc-----c---------ccccccCCcEEEEEecchhH
Confidence 678888888753 4677777543322110 0 00011 22478999999999
Q ss_pred hhhhhcCCChhhhhccHHHHHHHHHHhHHHHHHcCCc-EEEEecCCcCCcccchhccCCCCCCCCCCCCC--c-------
Q 020056 191 TADLFADMPIEKIYASVPDVINSFAYNVKSIYNSGGR-SFWIHNTGPLGCYAFVFLYSPSAPALKDSAGC--V------- 260 (331)
Q Consensus 191 ~~~~~~~~s~~~~~~~v~~~v~~i~~~v~~L~~~GAr-~~vV~nlpplgc~P~~~~~~~~~~~~~d~~~c--~------- 260 (331)
.... ... .........+++.+.++.|.+..-| .++++++|++..++........-+ ..-...| .
T Consensus 133 c~~~-~~~----~~~~~~~~~~nL~~~L~~Lr~~~P~~~V~lv~~~~~~~l~~~~~~p~~c~-~~~~~~C~c~~~~~~~~ 206 (288)
T cd01824 133 CSLC-EDA----NPGSPQTFVKNLRKALDILRDEVPRAFVNLVGLLNVASLRSLTKKPLQCE-TLLAPECPCLLGPTENS 206 (288)
T ss_pred hhhc-ccc----cCcCHHHHHHHHHHHHHHHHHhCCCcEEEEEcCCCcHHHHHhccCCcccc-ccCCCcCCCcCCCCcch
Confidence 7621 111 0122455667888888888877754 477777888765554431111000 0001123 2
Q ss_pred -hhhhHHHHHHHHHHHHHHHHHHHhCCCcEEEEEecchHHHHHH
Q 020056 261 -KPYNELAQYFNLKLKEAVVQLRKAFPSAAFTYVDVYSIKYSLF 303 (331)
Q Consensus 261 -~~~n~l~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~ii 303 (331)
+++.++...|++.+++..++-+-+..+..+++.. ++.+.+
T Consensus 207 ~~~~~~~~~~y~~~~~eia~~~~~~~~~f~vv~qP---f~~~~~ 247 (288)
T cd01824 207 YQDLKKFYKEYQNEVEEIVESGEFDREDFAVVVQP---FFEDTS 247 (288)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccccccCccEEeeC---chhccc
Confidence 3666778888888876665422223445555533 444443
No 27
>KOG3035 consensus Isoamyl acetate-hydrolyzing esterase [Lipid transport and metabolism]
Probab=96.68 E-value=0.035 Score=49.03 Aligned_cols=112 Identities=12% Similarity=0.015 Sum_probs=67.0
Q ss_pred cCcEEEEEecchhhhhhhhcCCChhhhhccHHHHHHHHHHhHHHHHHcC-CcEEEEecCCcCCcccchhccCCCCCCCCC
Q 020056 177 SQALYTFDIGQNDFTADLFADMPIEKIYASVPDVINSFAYNVKSIYNSG-GRSFWIHNTGPLGCYAFVFLYSPSAPALKD 255 (331)
Q Consensus 177 ~~sL~~v~iG~ND~~~~~~~~~s~~~~~~~v~~~v~~i~~~v~~L~~~G-Ar~~vV~nlpplgc~P~~~~~~~~~~~~~d 255 (331)
.-++.+|..|+||-... ..+.....-=+++-++++.+.++-|...- -.+|++++-||+...-..+.....
T Consensus 68 ~p~lvtVffGaNDs~l~---~~~~~~~hvPl~Ey~dNlr~iv~~lks~~~~~riIlitPpp~de~~~~~~~~e~------ 138 (245)
T KOG3035|consen 68 QPVLVTVFFGANDSCLP---EPSSLGQHVPLEEYKDNLRKIVSHLKSLSPETRIILITPPPVDEEAWEKQEQEP------ 138 (245)
T ss_pred CceEEEEEecCccccCC---CCCCCCCccCHHHHHHHHHHHHHHhhccCCcceEEEecCCCcCHHHHHHHhccc------
Confidence 45889999999997643 22211100112334455555555554433 456899999998876555544221
Q ss_pred CCCCchhhhHHHHHHHHHHHHHHHHHHHhCCCcEEEEEecchHHHHHHH
Q 020056 256 SAGCVKPYNELAQYFNLKLKEAVVQLRKAFPSAAFTYVDVYSIKYSLFK 304 (331)
Q Consensus 256 ~~~c~~~~n~l~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~ii~ 304 (331)
...-..+.|+.+..|++.+.+..+++ ++..+|.++.+++.-+
T Consensus 139 ~~~~~~RtNe~~~~Ya~ac~~la~e~-------~l~~vdlws~~Q~~~d 180 (245)
T KOG3035|consen 139 YVLGPERTNETVGTYAKACANLAQEI-------GLYVVDLWSKMQESDD 180 (245)
T ss_pred hhccchhhhhHHHHHHHHHHHHHHHh-------CCeeeeHHhhhhhccc
Confidence 01123358999999999887776654 3456787666665433
No 28
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=96.57 E-value=0.02 Score=49.57 Aligned_cols=160 Identities=21% Similarity=0.219 Sum_probs=80.7
Q ss_pred CEEEEcCCcccccCCCCCCCCCCCCCCCCCCCCCCCccCCCCchHHHHHHhhcCCCCCCCccccCCCCCCCcceecccCC
Q 020056 41 PAIFNFGDSNSDTGGISAALYPINWPYGQTYFHMPAGRFSDGRLIIDFIAESFGLPYLSAYLDSVGTNFSHGANFATGGS 120 (331)
Q Consensus 41 ~~l~vFGDSlsD~Gn~~~~~~~~~~Pyg~~~~~~p~gRfsnG~~~~d~la~~lg~~~~ppyl~~~~~~~~~G~NfA~gGA 120 (331)
+.+++.|+|.+.-+... +.|..|+-.+++.+|+++ +|.+++|.
T Consensus 2 k~~v~YGsSItqG~~As----------------------rpg~~~~~~~aR~l~~~~---------------iNLGfsG~ 44 (178)
T PF14606_consen 2 KRWVAYGSSITQGACAS----------------------RPGMAYPAILARRLGLDV---------------INLGFSGN 44 (178)
T ss_dssp -EEEEEE-TT-TTTT-S----------------------SGGGSHHHHHHHHHT-EE---------------EEEE-TCC
T ss_pred CeEEEECChhhcCCCCC----------------------CCcccHHHHHHHHcCCCe---------------EeeeecCc
Confidence 46788888866544421 247889999999999876 69999996
Q ss_pred cccCCCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHhhcCCcccCCCcHHhhccCcEEEEEecchhhhhhhhcCCCh
Q 020056 121 TIRVPDRILPTNEGFGFSPFYLDIQLSQFMLFKSRSQMIRQRGGIYASLMPQEEYFSQALYTFDIGQNDFTADLFADMPI 200 (331)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~l~~Qi~~f~~~~~~~~~~~g~~~~~~~~~~~~~~~~~sL~~v~iG~ND~~~~~~~~~s~ 200 (331)
.- ++..+..+++ . ...++|++..|.| + . .
T Consensus 45 ~~-------------------le~~~a~~ia---~--------------------~~a~~~~ld~~~N--~----~---~ 73 (178)
T PF14606_consen 45 GK-------------------LEPEVADLIA---E--------------------IDADLIVLDCGPN--M----S---P 73 (178)
T ss_dssp CS---------------------HHHHHHHH---H--------------------S--SEEEEEESHH--C----C---T
T ss_pred cc-------------------cCHHHHHHHh---c--------------------CCCCEEEEEeecC--C----C---H
Confidence 63 2333333321 1 1458999999999 1 1 1
Q ss_pred hhhhccHHHHHHHHHHhHHHHHHcC-CcEEEEecCCcCCcccchhccCCCCCCCCCCCCCchhhhHHHHHHHHHHHHHHH
Q 020056 201 EKIYASVPDVINSFAYNVKSIYNSG-GRSFWIHNTGPLGCYAFVFLYSPSAPALKDSAGCVKPYNELAQYFNLKLKEAVV 279 (331)
Q Consensus 201 ~~~~~~v~~~v~~i~~~v~~L~~~G-Ar~~vV~nlpplgc~P~~~~~~~~~~~~~d~~~c~~~~n~l~~~~N~~L~~~l~ 279 (331)
+ ++...+...|++|-+.= -.-|+++....- . .. ............+|+.+++.++
T Consensus 74 ~-------~~~~~~~~fv~~iR~~hP~tPIllv~~~~~--~---~~------------~~~~~~~~~~~~~~~~~r~~v~ 129 (178)
T PF14606_consen 74 E-------EFRERLDGFVKTIREAHPDTPILLVSPIPY--P---AG------------YFDNSRGETVEEFREALREAVE 129 (178)
T ss_dssp T-------THHHHHHHHHHHHHTT-SSS-EEEEE------T---TT------------TS--TTS--HHHHHHHHHHHHH
T ss_pred H-------HHHHHHHHHHHHHHHhCCCCCEEEEecCCc--c---cc------------ccCchHHHHHHHHHHHHHHHHH
Confidence 1 22344555556665433 455666654321 1 10 1122223456789999999999
Q ss_pred HHHHhCCCcEEEEEecchHHHHH------HHCCCCCCCcc
Q 020056 280 QLRKAFPSAAFTYVDVYSIKYSL------FKEPEKYGTSS 313 (331)
Q Consensus 280 ~l~~~~~~~~i~~~D~~~~~~~i------i~nP~~yGf~n 313 (331)
+++++ .+-+++|+|-..++-+- --||...||.-
T Consensus 130 ~l~~~-g~~nl~~l~g~~llg~d~e~tvDgvHP~DlG~~~ 168 (178)
T PF14606_consen 130 QLRKE-GDKNLYYLDGEELLGDDHEATVDGVHPNDLGMMR 168 (178)
T ss_dssp HHHHT-T-TTEEEE-HHHCS--------------------
T ss_pred HHHHc-CCCcEEEeCchhhcCccccccccccccccccccc
Confidence 99764 46778888877755222 23677777753
No 29
>cd01831 Endoglucanase_E_like Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.
Probab=96.54 E-value=0.055 Score=45.90 Aligned_cols=46 Identities=17% Similarity=0.280 Sum_probs=28.5
Q ss_pred EEEEEecchhhhhhhhcCCChhhhhccHHHHHHHHHHhHHHHHHcCC-cEEEEecC
Q 020056 180 LYTFDIGQNDFTADLFADMPIEKIYASVPDVINSFAYNVKSIYNSGG-RSFWIHNT 234 (331)
Q Consensus 180 L~~v~iG~ND~~~~~~~~~s~~~~~~~v~~~v~~i~~~v~~L~~~GA-r~~vV~nl 234 (331)
+++|.+|.||+.... ..+ ..+...++.+.|+++.+..- .+|+++..
T Consensus 58 ~vii~~G~ND~~~~~--~~~-------~~~~~~~~~~li~~i~~~~p~~~i~~~~~ 104 (169)
T cd01831 58 LVVINLGTNDFSTGN--NPP-------GEDFTNAYVEFIEELRKRYPDAPIVLMLG 104 (169)
T ss_pred EEEEECCcCCCCCCC--CCC-------HHHHHHHHHHHHHHHHHHCCCCeEEEEec
Confidence 588999999986421 111 23556677777777776653 34555543
No 30
>cd01833 XynB_like SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB. Most likely a secreted hydrolase with xylanase activity. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=96.34 E-value=0.022 Score=47.44 Aligned_cols=91 Identities=13% Similarity=0.127 Sum_probs=60.8
Q ss_pred cCcEEEEEecchhhhhhhhcCCChhhhhccHHHHHHHHHHhHHHHHHcCC-cEEEEecCCcCCcccchhccCCCCCCCCC
Q 020056 177 SQALYTFDIGQNDFTADLFADMPIEKIYASVPDVINSFAYNVKSIYNSGG-RSFWIHNTGPLGCYAFVFLYSPSAPALKD 255 (331)
Q Consensus 177 ~~sL~~v~iG~ND~~~~~~~~~s~~~~~~~v~~~v~~i~~~v~~L~~~GA-r~~vV~nlpplgc~P~~~~~~~~~~~~~d 255 (331)
.-+++++.+|+||.... .+ +.+..+++.+.|+++.+..- -.|+++++||....
T Consensus 40 ~pd~vvi~~G~ND~~~~----~~-------~~~~~~~~~~~i~~i~~~~p~~~ii~~~~~p~~~~--------------- 93 (157)
T cd01833 40 KPDVVLLHLGTNDLVLN----RD-------PDTAPDRLRALIDQMRAANPDVKIIVATLIPTTDA--------------- 93 (157)
T ss_pred CCCEEEEeccCcccccC----CC-------HHHHHHHHHHHHHHHHHhCCCeEEEEEeCCCCCCc---------------
Confidence 45789999999998642 11 13445666666777766532 23666666653211
Q ss_pred CCCCchhhhHHHHHHHHHHHHHHHHHHHhCCCcEEEEEecchHHHH
Q 020056 256 SAGCVKPYNELAQYFNLKLKEAVVQLRKAFPSAAFTYVDVYSIKYS 301 (331)
Q Consensus 256 ~~~c~~~~n~l~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~ 301 (331)
..+.....||+.+++.+++.... +..+.++|++..+..
T Consensus 94 ------~~~~~~~~~n~~l~~~~~~~~~~--~~~v~~vd~~~~~~~ 131 (157)
T cd01833 94 ------SGNARIAEYNAAIPGVVADLRTA--GSPVVLVDMSTGYTT 131 (157)
T ss_pred ------chhHHHHHHHHHHHHHHHHHhcC--CCCEEEEecCCCCCC
Confidence 01456789999999998886553 567899999988753
No 31
>cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=96.14 E-value=0.087 Score=44.60 Aligned_cols=88 Identities=23% Similarity=0.211 Sum_probs=52.3
Q ss_pred cCcEEEEEecchhhhhhhhcCCChhhhhccHHHHHHHHHHhHHHHHHcCC-cEEEEecCCcCCcccchhccCCCCCCCCC
Q 020056 177 SQALYTFDIGQNDFTADLFADMPIEKIYASVPDVINSFAYNVKSIYNSGG-RSFWIHNTGPLGCYAFVFLYSPSAPALKD 255 (331)
Q Consensus 177 ~~sL~~v~iG~ND~~~~~~~~~s~~~~~~~v~~~v~~i~~~v~~L~~~GA-r~~vV~nlpplgc~P~~~~~~~~~~~~~d 255 (331)
.-+++++.+|.||+.. +.+ .....+++.+.|+++.+.+. .+++++.+||.. ..
T Consensus 50 ~p~~vvi~~G~ND~~~----~~~-------~~~~~~~~~~lv~~i~~~~~~~~iil~~~~p~~-----~~---------- 103 (171)
T cd04502 50 QPRRVVLYAGDNDLAS----GRT-------PEEVLRDFRELVNRIRAKLPDTPIAIISIKPSP-----AR---------- 103 (171)
T ss_pred CCCEEEEEEecCcccC----CCC-------HHHHHHHHHHHHHHHHHHCCCCcEEEEEecCCC-----cc----------
Confidence 3468999999999753 222 23456677777777777653 346776665421 00
Q ss_pred CCCCchhhhHHHHHHHHHHHHHHHHHHHhCCCcEEEEEecchHHHH
Q 020056 256 SAGCVKPYNELAQYFNLKLKEAVVQLRKAFPSAAFTYVDVYSIKYS 301 (331)
Q Consensus 256 ~~~c~~~~n~l~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~ 301 (331)
...+.....+|+.+++.. ++.. .+.++|++..+.+
T Consensus 104 -----~~~~~~~~~~n~~~~~~a----~~~~--~v~~vD~~~~~~~ 138 (171)
T cd04502 104 -----WALRPKIRRFNALLKELA----ETRP--NLTYIDVASPMLD 138 (171)
T ss_pred -----hhhHHHHHHHHHHHHHHH----hcCC--CeEEEECcHHHhC
Confidence 111233456776665543 2222 4678999887754
No 32
>cd00229 SGNH_hydrolase SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=95.79 E-value=0.072 Score=43.93 Aligned_cols=95 Identities=12% Similarity=0.125 Sum_probs=58.6
Q ss_pred cCcEEEEEecchhhhhhhhcCCChhhhhccHHHHHHHHHHhHHHHHH-cCCcEEEEecCCcCCcccchhccCCCCCCCCC
Q 020056 177 SQALYTFDIGQNDFTADLFADMPIEKIYASVPDVINSFAYNVKSIYN-SGGRSFWIHNTGPLGCYAFVFLYSPSAPALKD 255 (331)
Q Consensus 177 ~~sL~~v~iG~ND~~~~~~~~~s~~~~~~~v~~~v~~i~~~v~~L~~-~GAr~~vV~nlpplgc~P~~~~~~~~~~~~~d 255 (331)
.-.++++.+|+||+.... ..+ .....+.+.+.++.+.+ ....+|++++.|+..+.|.
T Consensus 65 ~~d~vil~~G~ND~~~~~--~~~-------~~~~~~~~~~~i~~~~~~~~~~~vv~~~~~~~~~~~~------------- 122 (187)
T cd00229 65 KPDLVIIELGTNDLGRGG--DTS-------IDEFKANLEELLDALRERAPGAKVILITPPPPPPREG------------- 122 (187)
T ss_pred CCCEEEEEeccccccccc--ccC-------HHHHHHHHHHHHHHHHHHCCCCcEEEEeCCCCCCCch-------------
Confidence 578899999999997521 011 12334455555555554 5566788888888766544
Q ss_pred CCCCchhhhHHHHHHHHHHHHHHHHHHHhCCCcEEEEEecchHHHHH
Q 020056 256 SAGCVKPYNELAQYFNLKLKEAVVQLRKAFPSAAFTYVDVYSIKYSL 302 (331)
Q Consensus 256 ~~~c~~~~n~l~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i 302 (331)
..+.....+|..+++..++.... ..+.++|++..+...
T Consensus 123 ------~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~ 160 (187)
T cd00229 123 ------LLGRALPRYNEAIKAVAAENPAP---SGVDLVDLAALLGDE 160 (187)
T ss_pred ------hhHHHHHHHHHHHHHHHHHcCCC---cceEEEEhhhhhCCC
Confidence 12233457777776655544221 457789998777643
No 33
>cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=95.60 E-value=0.076 Score=46.06 Aligned_cols=95 Identities=13% Similarity=-0.037 Sum_probs=53.3
Q ss_pred cCcEEEEEecchhhhhhhhcCC-ChhhhhccHHHHHHHHHHhHHHHHHcCCcEEEEecCCcCCcccchhccCCCCCCCCC
Q 020056 177 SQALYTFDIGQNDFTADLFADM-PIEKIYASVPDVINSFAYNVKSIYNSGGRSFWIHNTGPLGCYAFVFLYSPSAPALKD 255 (331)
Q Consensus 177 ~~sL~~v~iG~ND~~~~~~~~~-s~~~~~~~v~~~v~~i~~~v~~L~~~GAr~~vV~nlpplgc~P~~~~~~~~~~~~~d 255 (331)
.-+++++.+|+||.......+. .......+.....+++...++++-+.|++ +++++.||+.-
T Consensus 59 ~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~~~~~l~~lv~~~~~~~~~-vili~~pp~~~---------------- 121 (200)
T cd01829 59 KPDVVVVFLGANDRQDIRDGDGYLKFGSPEWEEEYRQRIDELLNVARAKGVP-VIWVGLPAMRS---------------- 121 (200)
T ss_pred CCCEEEEEecCCCCccccCCCceeecCChhHHHHHHHHHHHHHHHHHhCCCc-EEEEcCCCCCC----------------
Confidence 3478888999999864211100 00001122334455666666666666766 77778877541
Q ss_pred CCCCchhhhHHHHHHHHHHHHHHHHHHHhCCCcEEEEEecchHHH
Q 020056 256 SAGCVKPYNELAQYFNLKLKEAVVQLRKAFPSAAFTYVDVYSIKY 300 (331)
Q Consensus 256 ~~~c~~~~n~l~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~ 300 (331)
...+.....+|..+++..+ ++ + +.++|++..+.
T Consensus 122 -----~~~~~~~~~~~~~~~~~a~----~~-~--~~~id~~~~~~ 154 (200)
T cd01829 122 -----PKLSADMVYLNSLYREEVA----KA-G--GEFVDVWDGFV 154 (200)
T ss_pred -----hhHhHHHHHHHHHHHHHHH----Hc-C--CEEEEhhHhhc
Confidence 0122344567776665443 33 2 57899987663
No 34
>cd01828 sialate_O-acetylesterase_like2 sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=95.57 E-value=0.079 Score=44.72 Aligned_cols=86 Identities=15% Similarity=0.232 Sum_probs=54.0
Q ss_pred cCcEEEEEecchhhhhhhhcCCChhhhhccHHHHHHHHHHhHHHHHH--cCCcEEEEecCCcCCcccchhccCCCCCCCC
Q 020056 177 SQALYTFDIGQNDFTADLFADMPIEKIYASVPDVINSFAYNVKSIYN--SGGRSFWIHNTGPLGCYAFVFLYSPSAPALK 254 (331)
Q Consensus 177 ~~sL~~v~iG~ND~~~~~~~~~s~~~~~~~v~~~v~~i~~~v~~L~~--~GAr~~vV~nlpplgc~P~~~~~~~~~~~~~ 254 (331)
.-+++++.+|.||.... .+. .+...++.+.|+++.+ .++ +++++++||.+ + .
T Consensus 48 ~pd~vvl~~G~ND~~~~----~~~-------~~~~~~l~~li~~~~~~~~~~-~vi~~~~~p~~--~----~-------- 101 (169)
T cd01828 48 QPKAIFIMIGINDLAQG----TSD-------EDIVANYRTILEKLRKHFPNI-KIVVQSILPVG--E----L-------- 101 (169)
T ss_pred CCCEEEEEeeccCCCCC----CCH-------HHHHHHHHHHHHHHHHHCCCC-eEEEEecCCcC--c----c--------
Confidence 34889999999998642 111 3445566666666666 454 58888888765 0 0
Q ss_pred CCCCCchhhhHHHHHHHHHHHHHHHHHHHhCCCcEEEEEecchHHH
Q 020056 255 DSAGCVKPYNELAQYFNLKLKEAVVQLRKAFPSAAFTYVDVYSIKY 300 (331)
Q Consensus 255 d~~~c~~~~n~l~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~ 300 (331)
....+..+..||+.+++..+ + . .+.++|++..+.
T Consensus 102 -----~~~~~~~~~~~n~~l~~~a~----~-~--~~~~id~~~~~~ 135 (169)
T cd01828 102 -----KSIPNEQIEELNRQLAQLAQ----Q-E--GVTFLDLWAVFT 135 (169)
T ss_pred -----CcCCHHHHHHHHHHHHHHHH----H-C--CCEEEechhhhc
Confidence 01223456788988876554 2 2 445689887663
No 35
>KOG3670 consensus Phospholipase [Lipid transport and metabolism]
Probab=95.37 E-value=0.23 Score=47.74 Aligned_cols=53 Identities=19% Similarity=0.093 Sum_probs=35.8
Q ss_pred cEEEEEecchhhhhhhhcCCChhhhhccHHHHHHHHHHhHHHHHHcCCcEEEEecC
Q 020056 179 ALYTFDIGQNDFTADLFADMPIEKIYASVPDVINSFAYNVKSIYNSGGRSFWIHNT 234 (331)
Q Consensus 179 sL~~v~iG~ND~~~~~~~~~s~~~~~~~v~~~v~~i~~~v~~L~~~GAr~~vV~nl 234 (331)
-|+.||||+||+-..- .+. ++.+..++.-.+.|.++++.|.+.==|.+|++-.
T Consensus 186 KLi~IfIG~ND~c~~c-~~~--~~~~~~~~~~~~~i~~Al~~L~~nvPR~iV~lvg 238 (397)
T KOG3670|consen 186 KLITIFIGTNDLCAYC-EGP--ETPPSPVDQHKRNIRKALEILRDNVPRTIVSLVG 238 (397)
T ss_pred EEEEEEeccchhhhhc-cCC--CCCCCchhHHHHHHHHHHHHHHhcCCceEEEEec
Confidence 5889999999998632 121 1223344455567889999998887777665543
No 36
>cd01820 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases. Platelet-activating factor (PAF) and PAF-AH are key players in inflammation and in atherosclerosis. PAF-AH is a calcium independent phospholipase A2 which exhibits strong substrate specificity towards PAF, hydrolyzing an acetyl ester at the sn-2 position. PAF-AH also degrades a family of oxidized PAF-like phospholipids with short sn-2 residues. In addition, PAF and PAF-AH are associated with neural migration and mammalian reproduction.
Probab=94.86 E-value=0.22 Score=43.94 Aligned_cols=88 Identities=15% Similarity=0.150 Sum_probs=54.0
Q ss_pred cCcEEEEEecchhhhhhhhcCCChhhhhccHHHHHHHHHHhHHHHHHcC-CcEEEEecCCcCCcccchhccCCCCCCCCC
Q 020056 177 SQALYTFDIGQNDFTADLFADMPIEKIYASVPDVINSFAYNVKSIYNSG-GRSFWIHNTGPLGCYAFVFLYSPSAPALKD 255 (331)
Q Consensus 177 ~~sL~~v~iG~ND~~~~~~~~~s~~~~~~~v~~~v~~i~~~v~~L~~~G-Ar~~vV~nlpplgc~P~~~~~~~~~~~~~d 255 (331)
.-.+++|++|+||+... .+ ..+..+++.+.|+++.+.. ..+|++++++|.+..|
T Consensus 89 ~pd~VvI~~G~ND~~~~----~~-------~~~~~~~l~~ii~~l~~~~P~~~Iil~~~~p~~~~~-------------- 143 (214)
T cd01820 89 NPKVVVLLIGTNNIGHT----TT-------AEEIAEGILAIVEEIREKLPNAKILLLGLLPRGQNP-------------- 143 (214)
T ss_pred CCCEEEEEecccccCCC----CC-------HHHHHHHHHHHHHHHHHHCCCCeEEEEeccCCCCCc--------------
Confidence 35788999999998642 22 2345566777777776653 3468888887754220
Q ss_pred CCCCchhhhHHHHHHHHHHHHHHHHHHHhCCCcEEEEEecchHHH
Q 020056 256 SAGCVKPYNELAQYFNLKLKEAVVQLRKAFPSAAFTYVDVYSIKY 300 (331)
Q Consensus 256 ~~~c~~~~n~l~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~ 300 (331)
..+.+....+|+.+++.. ++. ..+.++|++..+.
T Consensus 144 -----~~~~~~~~~~n~~l~~~~----~~~--~~v~~vd~~~~~~ 177 (214)
T cd01820 144 -----NPLRERNAQVNRLLAVRY----DGL--PNVTFLDIDKGFV 177 (214)
T ss_pred -----hhHHHHHHHHHHHHHHHh----cCC--CCEEEEeCchhhc
Confidence 122344567777765543 222 2577889988764
No 37
>COG2755 TesA Lysophospholipase L1 and related esterases [Amino acid transport and metabolism]
Probab=93.67 E-value=1.1 Score=39.26 Aligned_cols=14 Identities=29% Similarity=0.396 Sum_probs=12.8
Q ss_pred CcEEEEEecchhhh
Q 020056 178 QALYTFDIGQNDFT 191 (331)
Q Consensus 178 ~sL~~v~iG~ND~~ 191 (331)
.++++|.+|+||..
T Consensus 78 ~d~v~i~lG~ND~~ 91 (216)
T COG2755 78 PDLVIIMLGGNDIG 91 (216)
T ss_pred CCEEEEEeeccccc
Confidence 68899999999996
No 38
>cd01826 acyloxyacyl_hydrolase_like Acyloxyacyl-hydrolase like subfamily of the SGNH-hydrolase family. Acyloxyacyl-hydrolase is a leukocyte-secreted enzyme that deacetylates bacterial lipopolysaccharides.
Probab=92.71 E-value=1.1 Score=41.90 Aligned_cols=127 Identities=13% Similarity=0.118 Sum_probs=69.5
Q ss_pred CcEEEEEecchhhhhhhhcCCChhhhhccHHHHHHHHHHhHHHHHHcCCc--EEEEecCCcCCcc---------cchhcc
Q 020056 178 QALYTFDIGQNDFTADLFADMPIEKIYASVPDVINSFAYNVKSIYNSGGR--SFWIHNTGPLGCY---------AFVFLY 246 (331)
Q Consensus 178 ~sL~~v~iG~ND~~~~~~~~~s~~~~~~~v~~~v~~i~~~v~~L~~~GAr--~~vV~nlpplgc~---------P~~~~~ 246 (331)
-.+++|++|+||..... +... . ...+.+--+++.+.|+.|.+..-+ +++++++|++..+ |.....
T Consensus 123 P~lVtI~lGgND~C~g~--~d~~-~-~tp~eefr~NL~~~L~~Lr~~lP~~s~ViLvgmpd~~~L~~~~~~r~hplg~~~ 198 (305)
T cd01826 123 PALVIYSMIGNDVCNGP--NDTI-N-HTTPEEFYENVMEALKYLDTKLPNGSHVILVGLVDGRILYDTLHNRLHPIGQLN 198 (305)
T ss_pred CeEEEEEeccchhhcCC--Cccc-c-CcCHHHHHHHHHHHHHHHHhcCCCCCEEEEEeccchhhhhhhhccccccchhcc
Confidence 37888899999997531 1100 1 123345567788888888888744 8999999995322 000000
Q ss_pred C-CCCCCCCCC------CCCc------hhhhHHHHHHHHHHHHHHHHHHHh--CCCcEEEEEecchHHHHHHHCCCCCC
Q 020056 247 S-PSAPALKDS------AGCV------KPYNELAQYFNLKLKEAVVQLRKA--FPSAAFTYVDVYSIKYSLFKEPEKYG 310 (331)
Q Consensus 247 ~-~~~~~~~d~------~~c~------~~~n~l~~~~N~~L~~~l~~l~~~--~~~~~i~~~D~~~~~~~ii~nP~~yG 310 (331)
. -.-+.-||- ..|. ++..+++..+=++|.+++.++.++ +....+++.|+. ++.++....+.|
T Consensus 199 ~~vty~~~y~~lncl~~spC~gw~~~n~t~rn~t~~~a~~l~~~~~~ia~~~~f~nF~v~~~~f~--l~~v~~~~~~~g 275 (305)
T cd01826 199 KDVTYPNLYDYLNCLQVSPCWGWLNSNETLRNLTSERAAQLSNVLKRIAANETFNNFDVHYIDFP--IQQIVDMWIAFG 275 (305)
T ss_pred cccchhhhhhhhcccccCCccccccccccchhHHHHHHHHHHHHHHHHHhhccccceeEEEecch--HHHHhhHHHhcC
Confidence 0 000000111 1343 234455556666666666666553 455778888773 666655544444
No 39
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=88.98 E-value=1.6 Score=36.19 Aligned_cols=15 Identities=13% Similarity=0.113 Sum_probs=12.2
Q ss_pred cCcEEEEEecchhhh
Q 020056 177 SQALYTFDIGQNDFT 191 (331)
Q Consensus 177 ~~sL~~v~iG~ND~~ 191 (331)
...+++|++|+||..
T Consensus 50 ~~d~vvi~lGtNd~~ 64 (150)
T cd01840 50 LRKTVVIGLGTNGPF 64 (150)
T ss_pred CCCeEEEEecCCCCC
Confidence 357789999999973
No 40
>COG3240 Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only]
Probab=88.74 E-value=0.5 Score=45.23 Aligned_cols=68 Identities=19% Similarity=0.187 Sum_probs=53.1
Q ss_pred cCcEEEEEecchhhhhhhhcCCChhhhh--ccHHHHHHHHHHhHHHHHHcCCcEEEEecCCcCCcccchhccC
Q 020056 177 SQALYTFDIGQNDFTADLFADMPIEKIY--ASVPDVINSFAYNVKSIYNSGGRSFWIHNTGPLGCYAFVFLYS 247 (331)
Q Consensus 177 ~~sL~~v~iG~ND~~~~~~~~~s~~~~~--~~v~~~v~~i~~~v~~L~~~GAr~~vV~nlpplgc~P~~~~~~ 247 (331)
.+.++..|+|+||+...- .++ .+.. ..+......+.+++..++..+...||..+.|.++..|..+...
T Consensus 98 ~~~~~~~~a~gnd~A~gg--a~~-~~~~~~~~i~~~~~~~~~Qv~~~l~a~~~~~v~~~~~~~~l~p~~l~~~ 167 (370)
T COG3240 98 PNGLYIHWAGGNDLAVGG--ARS-TEPNTGNSIGASATSLAQQVGAFLAAGQGGFVWPNYPAQGLDPSALYFL 167 (370)
T ss_pred cccccCcccccccHhhhc--ccc-ccccccccccccccchHHHHHHHHHhcCCccccccccccccCHHHHHHH
Confidence 678899999999998742 111 1222 3445566788899999999999999999999999999988753
No 41
>PLN02757 sirohydrochlorine ferrochelatase
Probab=86.67 E-value=3.8 Score=34.58 Aligned_cols=83 Identities=7% Similarity=0.133 Sum_probs=53.0
Q ss_pred HHHhHHHHHHcCCcEEEEecCCcCCcccchhccCCCCCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHhCCCcEEEEE
Q 020056 214 FAYNVKSIYNSGGRSFWIHNTGPLGCYAFVFLYSPSAPALKDSAGCVKPYNELAQYFNLKLKEAVVQLRKAFPSAAFTYV 293 (331)
Q Consensus 214 i~~~v~~L~~~GAr~~vV~nlpplgc~P~~~~~~~~~~~~~d~~~c~~~~n~l~~~~N~~L~~~l~~l~~~~~~~~i~~~ 293 (331)
+.+.|++|.+.|+|+|+| .|.++.... ....-+.+.++++++++|+.+|.+.
T Consensus 60 l~eal~~l~~~g~~~vvV--------vP~FL~~G~--------------------H~~~DIp~~v~~~~~~~p~~~i~~~ 111 (154)
T PLN02757 60 IKDAFGRCVEQGASRVIV--------SPFFLSPGR--------------------HWQEDIPALTAEAAKEHPGVKYLVT 111 (154)
T ss_pred HHHHHHHHHHCCCCEEEE--------EEhhhcCCc--------------------chHhHHHHHHHHHHHHCCCcEEEEC
Confidence 455567888889999999 466665531 2234467788889999999999875
Q ss_pred e---cchHHHHHHHC------CCCCCCccCCccccCCccc
Q 020056 294 D---VYSIKYSLFKE------PEKYGTSSVSHTTYGMEEV 324 (331)
Q Consensus 294 D---~~~~~~~ii~n------P~~yGf~n~~~aCcg~~~~ 324 (331)
. .+..+.+++.+ ...-+.....+.|-|.|.-
T Consensus 112 ~pLG~~p~l~~ll~~Ri~eal~~~~~~~~~~~~~~~~~~~ 151 (154)
T PLN02757 112 APIGLHELMVDVVNDRIKYCLSHVAGDADECDVCAGTGKC 151 (154)
T ss_pred CCCCCCHHHHHHHHHHHHHHhhcccCCCCccceeeccccc
Confidence 3 33444444332 1111234456788888754
No 42
>PF02633 Creatininase: Creatinine amidohydrolase; InterPro: IPR003785 This family includes the enzymes creatininase and 2-amino-5-formylamino-6-ribosylaminopyrimidin-4(3H)-one 5'-monophosphate deformylase, also known as formamide hydrolase. Creatinase or creatinine amidohydrolase (3.5.2.10 from EC) catalyses the hydrolysis of creatinine to creatine, which can then be metabolised to urea and sarcosine by creatinase (3.5.3.3 from EC). Creatininase is a member of the urease-related amidohydrolase superfamily []. Formamide hydrolase catalyzes the hydrolysis of the formamide of 2-amino-5-formylamino-6-ribosylamino-4(3H)-pyrimidinone 5'-monophosphate (FAPy) to form 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (APy) (3.5.1.102 from EC). ; PDB: 3A6K_F 3A6F_A 3A6D_B 1J2U_B 3A6J_C 1J2T_A 3A6G_C 3A6H_F 1Q3K_E 3A6L_C ....
Probab=74.01 E-value=16 Score=32.93 Aligned_cols=85 Identities=18% Similarity=0.175 Sum_probs=51.5
Q ss_pred EEEecchhhhhhhhcCCChhhhhccHHHHHHHHHHhHHHHHHcCCcEEEEecCCcCCcccchhccCCCCCCCCCCCCCch
Q 020056 182 TFDIGQNDFTADLFADMPIEKIYASVPDVINSFAYNVKSIYNSGGRSFWIHNTGPLGCYAFVFLYSPSAPALKDSAGCVK 261 (331)
Q Consensus 182 ~v~iG~ND~~~~~~~~~s~~~~~~~v~~~v~~i~~~v~~L~~~GAr~~vV~nlpplgc~P~~~~~~~~~~~~~d~~~c~~ 261 (331)
.++.|.+.....| ..++. --.....+-+.+.++.|...|.|+|+|+|=- +|
T Consensus 61 ~i~yG~s~~h~~f--pGTis---l~~~t~~~~l~di~~sl~~~Gf~~ivivngH---------------------gG--- 111 (237)
T PF02633_consen 61 PIPYGCSPHHMGF--PGTIS---LSPETLIALLRDILRSLARHGFRRIVIVNGH---------------------GG--- 111 (237)
T ss_dssp -B--BB-GCCTTS--TT-BB---B-HHHHHHHHHHHHHHHHHHT--EEEEEESS---------------------TT---
T ss_pred CCccccCcccCCC--CCeEE---eCHHHHHHHHHHHHHHHHHcCCCEEEEEECC---------------------Hh---
Confidence 4588988887643 22221 1113445556667889999999999998831 11
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhCCCcEEEEEecchHHHHHH
Q 020056 262 PYNELAQYFNLKLKEAVVQLRKAFPSAAFTYVDVYSIKYSLF 303 (331)
Q Consensus 262 ~~n~l~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~ii 303 (331)
....|+..+++|++++++..+..+|++.+.....
T Consensus 112 --------N~~~l~~~~~~l~~~~~~~~v~~~~~~~~~~~~~ 145 (237)
T PF02633_consen 112 --------NIAALEAAARELRQEYPGVKVFVINWWQLAEDEG 145 (237)
T ss_dssp --------HHHHHHHHHHHHHHHGCC-EEEEEEGGGCSHCHH
T ss_pred --------HHHHHHHHHHHHHhhCCCcEEEEeechhccchhh
Confidence 1135677788888888899999999998866554
No 43
>cd03416 CbiX_SirB_N Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), N-terminal domain. SirB catalyzes the ferro-chelation of sirohydrochlorin to siroheme, the prosthetic group of sulfite and nitrite reductases. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, an important step in the vitamin B12 biosynthetic pathway. CbiX often contains a C-terminal histidine-rich region that may be important for metal delivery and/or storage, and may also contain an iron-sulfur center. Both are found in a wide range of bacteria. This subgroup also contains single domain proteins from archaea and bacteria which may represent the ancestral form of class II chelatases before domain duplication occurred.
Probab=66.50 E-value=14 Score=28.20 Aligned_cols=52 Identities=13% Similarity=0.221 Sum_probs=34.8
Q ss_pred HHhHHHHHHcCCcEEEEecCCcCCcccchhccCCCCCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHhCCCcEEEEEe
Q 020056 215 AYNVKSIYNSGGRSFWIHNTGPLGCYAFVFLYSPSAPALKDSAGCVKPYNELAQYFNLKLKEAVVQLRKAFPSAAFTYVD 294 (331)
Q Consensus 215 ~~~v~~L~~~GAr~~vV~nlpplgc~P~~~~~~~~~~~~~d~~~c~~~~n~l~~~~N~~L~~~l~~l~~~~~~~~i~~~D 294 (331)
.+.+++|.+.|+++++|+ |.+..... ....-+.+.+++++.++++.++.+.+
T Consensus 47 ~~~l~~l~~~g~~~v~vv--------Plfl~~G~--------------------h~~~dip~~~~~~~~~~~~~~i~~~~ 98 (101)
T cd03416 47 AEALDELAAQGATRIVVV--------PLFLLAGG--------------------HVKEDIPAALAAARARHPGVRIRYAP 98 (101)
T ss_pred HHHHHHHHHcCCCEEEEE--------eeEeCCCc--------------------cccccHHHHHHHHHHHCCCeEEEecC
Confidence 345678888899999884 55555421 22234556667777788998887754
No 44
>PF01903 CbiX: CbiX; InterPro: IPR002762 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents the CbiX protein, which functions as a cobalt-chelatase in the anaerobic biosynthesis of cobalamin. It catalyses the insertion of cobalt into sirohydrochlorin. The structure of CbiX from Archaeoglobus fulgidus consists of a central mixed beta-sheet flanked by four alpha-helices, although it is about half the size of other Class II tetrapyrrole chelatases []. The CbiX proteins found in archaea appear to be shorter than those found in eubacteria [].; GO: 0016829 lyase activity, 0046872 metal ion binding, 0009236 cobalamin biosynthetic process; PDB: 2XWQ_C 2DJ5_A 1TJN_A 2XWS_A 3LYH_B 2JH3_D.
Probab=66.40 E-value=7.2 Score=30.05 Aligned_cols=54 Identities=11% Similarity=0.224 Sum_probs=36.4
Q ss_pred HHHhHHHHHHcCCcEEEEecCCcCCcccchhccCCCCCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHhCCCcEEEEE
Q 020056 214 FAYNVKSIYNSGGRSFWIHNTGPLGCYAFVFLYSPSAPALKDSAGCVKPYNELAQYFNLKLKEAVVQLRKAFPSAAFTYV 293 (331)
Q Consensus 214 i~~~v~~L~~~GAr~~vV~nlpplgc~P~~~~~~~~~~~~~d~~~c~~~~n~l~~~~N~~L~~~l~~l~~~~~~~~i~~~ 293 (331)
+.+.+++|.+.|+++|+|+ |.++... .....-+.+.+++++.++|+.++.+.
T Consensus 39 l~~~l~~l~~~g~~~ivvv--------P~fL~~G--------------------~h~~~DIp~~l~~~~~~~~~~~v~~~ 90 (105)
T PF01903_consen 39 LEEALERLVAQGARRIVVV--------PYFLFPG--------------------YHVKRDIPEALAEARERHPGIEVRVA 90 (105)
T ss_dssp CHHCCHHHHCCTCSEEEEE--------EESSSSS--------------------HHHHCHHHHHHCHHHHCSTTEEEEE-
T ss_pred HHHHHHHHHHcCCCeEEEE--------eeeecCc--------------------cchHhHHHHHHHHHHhhCCceEEEEC
Confidence 3445688889999999984 5555431 12223367788899999999999886
Q ss_pred ec
Q 020056 294 DV 295 (331)
Q Consensus 294 D~ 295 (331)
..
T Consensus 91 ~p 92 (105)
T PF01903_consen 91 PP 92 (105)
T ss_dssp --
T ss_pred CC
Confidence 54
No 45
>COG2845 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=60.97 E-value=29 Score=32.88 Aligned_cols=82 Identities=20% Similarity=0.137 Sum_probs=52.5
Q ss_pred cCcEEEEEecchhhhhhhhcCCChhhhhccHHHHHHHHHHhHHHHHHcCCc---EEEEecCCcCCcccchhccCCCCCCC
Q 020056 177 SQALYTFDIGQNDFTADLFADMPIEKIYASVPDVINSFAYNVKSIYNSGGR---SFWIHNTGPLGCYAFVFLYSPSAPAL 253 (331)
Q Consensus 177 ~~sL~~v~iG~ND~~~~~~~~~s~~~~~~~v~~~v~~i~~~v~~L~~~GAr---~~vV~nlpplgc~P~~~~~~~~~~~~ 253 (331)
.-+..+|.+|.||.-.... +..... .-.+.-.+++.+-|.+|.+.=.+ .++.+++|++-
T Consensus 177 ~~a~vVV~lGaND~q~~~~-gd~~~k--f~S~~W~~eY~kRvd~~l~ia~~~~~~V~WvGmP~~r--------------- 238 (354)
T COG2845 177 KPAAVVVMLGANDRQDFKV-GDVYEK--FRSDEWTKEYEKRVDAILKIAHTHKVPVLWVGMPPFR--------------- 238 (354)
T ss_pred CccEEEEEecCCCHHhccc-CCeeee--cCchHHHHHHHHHHHHHHHHhcccCCcEEEeeCCCcc---------------
Confidence 3456778999999987432 211111 11245677777777777764432 47888888742
Q ss_pred CCCCCCchhhhHHHHHHHHHHHHHHHHHH
Q 020056 254 KDSAGCVKPYNELAQYFNLKLKEAVVQLR 282 (331)
Q Consensus 254 ~d~~~c~~~~n~l~~~~N~~L~~~l~~l~ 282 (331)
.+.+|.-...+|...++.++++.
T Consensus 239 ------~~~l~~dm~~ln~iy~~~vE~~~ 261 (354)
T COG2845 239 ------KKKLNADMVYLNKIYSKAVEKLG 261 (354)
T ss_pred ------ccccchHHHHHHHHHHHHHHHhC
Confidence 23455556789999988887763
No 46
>cd00384 ALAD_PBGS Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. They either contain a cysteine-rich zinc binding site (consensus DXCXCX(Y/F)X3G(H/Q)CG) or an aspartate-rich magnesium binding site (consensus DXALDX(Y/F)X3G(H/Q)DG). The cyste
Probab=54.42 E-value=53 Score=30.94 Aligned_cols=64 Identities=16% Similarity=0.205 Sum_probs=43.6
Q ss_pred HHHHHHHHhHHHHHHcCCcEEEEecCCcCCcccchhccCCCCCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHhCCCc
Q 020056 209 DVINSFAYNVKSIYNSGGRSFWIHNTGPLGCYAFVFLYSPSAPALKDSAGCVKPYNELAQYFNLKLKEAVVQLRKAFPSA 288 (331)
Q Consensus 209 ~~v~~i~~~v~~L~~~GAr~~vV~nlpplgc~P~~~~~~~~~~~~~d~~~c~~~~n~l~~~~N~~L~~~l~~l~~~~~~~ 288 (331)
.-++.+.+.++++.++|.+.|+++++|.. .- .. | .+..+ =|..+++.+..+++++|+.
T Consensus 48 ~s~d~l~~~~~~~~~~Gi~~v~LFgv~~~-Kd-----~~----------g-s~A~~-----~~g~v~~air~iK~~~p~l 105 (314)
T cd00384 48 LSVDSLVEEAEELADLGIRAVILFGIPEH-KD-----EI----------G-SEAYD-----PDGIVQRAIRAIKEAVPEL 105 (314)
T ss_pred eCHHHHHHHHHHHHHCCCCEEEEECCCCC-CC-----CC----------c-ccccC-----CCChHHHHHHHHHHhCCCc
Confidence 44688889999999999999999999642 11 11 1 11111 1345677888899999986
Q ss_pred EEEEEec
Q 020056 289 AFTYVDV 295 (331)
Q Consensus 289 ~i~~~D~ 295 (331)
-+ +.|+
T Consensus 106 ~v-i~Dv 111 (314)
T cd00384 106 VV-ITDV 111 (314)
T ss_pred EE-EEee
Confidence 54 5675
No 47
>cd04824 eu_ALAD_PBGS_cysteine_rich Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. The eukaryotic PBGSs represented by this model, which contain a cysteine-rich zinc binding motif (DXCXCX(Y/F)X3G(H/Q)CG), require zinc for their activity, they
Probab=53.67 E-value=20 Score=33.83 Aligned_cols=66 Identities=15% Similarity=0.080 Sum_probs=43.6
Q ss_pred HHHHHHHHhHHHHHHcCCcEEEEecCCcCC-cccchhccCCCCCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHhCCC
Q 020056 209 DVINSFAYNVKSIYNSGGRSFWIHNTGPLG-CYAFVFLYSPSAPALKDSAGCVKPYNELAQYFNLKLKEAVVQLRKAFPS 287 (331)
Q Consensus 209 ~~v~~i~~~v~~L~~~GAr~~vV~nlpplg-c~P~~~~~~~~~~~~~d~~~c~~~~n~l~~~~N~~L~~~l~~l~~~~~~ 287 (331)
--++.+.+.++++.++|.+.|+++++|+-. .-+. . + .+. ..=|..+++.++.+++++|+
T Consensus 48 ~s~d~l~~~~~~~~~~Gi~~v~LFgv~~~~~Kd~~---~-g-----------s~a-----~~~~g~v~~air~iK~~~pd 107 (320)
T cd04824 48 YGVNRLEEFLRPLVAKGLRSVILFGVPLKPGKDDR---S-G-----------SAA-----DDEDGPVIQAIKLIREEFPE 107 (320)
T ss_pred eCHHHHHHHHHHHHHCCCCEEEEeCCCccccCCcC---c-c-----------ccc-----cCCCChHHHHHHHHHHhCCC
Confidence 346788889999999999999999997521 1111 0 0 000 01134556778888899998
Q ss_pred cEEEEEec
Q 020056 288 AAFTYVDV 295 (331)
Q Consensus 288 ~~i~~~D~ 295 (331)
.-+ +.|+
T Consensus 108 l~v-i~Dv 114 (320)
T cd04824 108 LLI-ACDV 114 (320)
T ss_pred cEE-EEee
Confidence 654 5676
No 48
>PRK13384 delta-aminolevulinic acid dehydratase; Provisional
Probab=53.09 E-value=37 Score=32.01 Aligned_cols=64 Identities=17% Similarity=0.156 Sum_probs=43.9
Q ss_pred HHHHHHHHhHHHHHHcCCcEEEEecCCcCCcccchhccCCCCCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHhCCCc
Q 020056 209 DVINSFAYNVKSIYNSGGRSFWIHNTGPLGCYAFVFLYSPSAPALKDSAGCVKPYNELAQYFNLKLKEAVVQLRKAFPSA 288 (331)
Q Consensus 209 ~~v~~i~~~v~~L~~~GAr~~vV~nlpplgc~P~~~~~~~~~~~~~d~~~c~~~~n~l~~~~N~~L~~~l~~l~~~~~~~ 288 (331)
.-++.+.+.++++.++|.+.|+++++|+. .- .. |. +..+ =|..+++.++.+++++|+.
T Consensus 58 ~sid~l~~~~~~~~~~Gi~~v~lFgv~~~-Kd-----~~----------gs-~A~~-----~~g~v~~air~iK~~~pdl 115 (322)
T PRK13384 58 LPESALADEIERLYALGIRYVMPFGISHH-KD-----AK----------GS-DTWD-----DNGLLARMVRTIKAAVPEM 115 (322)
T ss_pred ECHHHHHHHHHHHHHcCCCEEEEeCCCCC-CC-----CC----------cc-cccC-----CCChHHHHHHHHHHHCCCe
Confidence 34678888899999999999999999641 11 11 11 1111 1455678888899999987
Q ss_pred EEEEEec
Q 020056 289 AFTYVDV 295 (331)
Q Consensus 289 ~i~~~D~ 295 (331)
-+ +.|+
T Consensus 116 ~v-i~DV 121 (322)
T PRK13384 116 MV-IPDI 121 (322)
T ss_pred EE-Eeee
Confidence 54 5675
No 49
>PRK09283 delta-aminolevulinic acid dehydratase; Validated
Probab=47.75 E-value=74 Score=30.15 Aligned_cols=64 Identities=19% Similarity=0.200 Sum_probs=43.4
Q ss_pred HHHHHHHHhHHHHHHcCCcEEEEecCCcCCcccchhccCCCCCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHhCCCc
Q 020056 209 DVINSFAYNVKSIYNSGGRSFWIHNTGPLGCYAFVFLYSPSAPALKDSAGCVKPYNELAQYFNLKLKEAVVQLRKAFPSA 288 (331)
Q Consensus 209 ~~v~~i~~~v~~L~~~GAr~~vV~nlpplgc~P~~~~~~~~~~~~~d~~~c~~~~n~l~~~~N~~L~~~l~~l~~~~~~~ 288 (331)
.-++.+.+.++++.++|.+.|+++++|.. ....+ .+..+. |..+++.++.+++++|+.
T Consensus 56 ~s~d~l~~~v~~~~~~Gi~av~LFgv~~~------Kd~~g-----------s~A~~~-----~g~v~rair~iK~~~p~l 113 (323)
T PRK09283 56 LSIDLLVKEAEEAVELGIPAVALFGVPEL------KDEDG-----------SEAYNP-----DGLVQRAIRAIKKAFPEL 113 (323)
T ss_pred eCHHHHHHHHHHHHHCCCCEEEEeCcCCC------CCccc-----------ccccCC-----CCHHHHHHHHHHHhCCCc
Confidence 34678888899999999999999998432 11111 111111 345677888889999987
Q ss_pred EEEEEec
Q 020056 289 AFTYVDV 295 (331)
Q Consensus 289 ~i~~~D~ 295 (331)
-+ ..|+
T Consensus 114 ~v-i~DV 119 (323)
T PRK09283 114 GV-ITDV 119 (323)
T ss_pred EE-EEee
Confidence 54 5676
No 50
>cd03414 CbiX_SirB_C Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), C-terminal domain. SirB catalyzes the ferro-chelation of sirohydrochlorin to siroheme, the prosthetic group of sulfite and nitrite reductases. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, an important step in the vitamin B12 biosynthetic pathway. CbiX often contains a C-terminal histidine-rich region that may be important for metal delivery and/or storage, and may also contain an iron-sulfur center. Both CbiX and SirB are found in a wide range of bacteria.
Probab=45.96 E-value=64 Score=25.16 Aligned_cols=51 Identities=14% Similarity=0.358 Sum_probs=32.5
Q ss_pred HHHhHHHHHHcCCcEEEEecCCcCCcccchhccCCCCCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHhCCCcEEEEE
Q 020056 214 FAYNVKSIYNSGGRSFWIHNTGPLGCYAFVFLYSPSAPALKDSAGCVKPYNELAQYFNLKLKEAVVQLRKAFPSAAFTYV 293 (331)
Q Consensus 214 i~~~v~~L~~~GAr~~vV~nlpplgc~P~~~~~~~~~~~~~d~~~c~~~~n~l~~~~N~~L~~~l~~l~~~~~~~~i~~~ 293 (331)
+.+.+++|.+.|+++++|+ |.+..... .++ .+...+++++++ |+.++.+.
T Consensus 47 ~~~~l~~l~~~g~~~i~vv--------P~fL~~G~--------------------h~~-~i~~~~~~~~~~-~~~~i~~~ 96 (117)
T cd03414 47 LPEALERLRALGARRVVVL--------PYLLFTGV--------------------LMD-RIEEQVAELAAE-PGIEFVLA 96 (117)
T ss_pred HHHHHHHHHHcCCCEEEEE--------echhcCCc--------------------hHH-HHHHHHHHHHhC-CCceEEEC
Confidence 4455677888999999884 44444310 122 355667777777 78777764
Q ss_pred e
Q 020056 294 D 294 (331)
Q Consensus 294 D 294 (331)
.
T Consensus 97 ~ 97 (117)
T cd03414 97 P 97 (117)
T ss_pred C
Confidence 3
No 51
>PF00490 ALAD: Delta-aminolevulinic acid dehydratase; InterPro: IPR001731 Tetrapyrroles are large macrocyclic compounds derived from a common biosynthetic pathway []. The end-product, uroporphyrinogen III, is used to synthesise a number of important molecules, including vitamin B12, haem, sirohaem, chlorophyll, coenzyme F430 and phytochromobilin []. The first stage in tetrapyrrole synthesis is the synthesis of 5-aminoaevulinic acid ALA via two possible routes: (1) condensation of succinyl CoA and glycine (C4 pathway) using ALA synthase (2.3.1.37 from EC), or (2) decarboxylation of glutamate (C5 pathway) via three different enzymes, glutamyl-tRNA synthetase (6.1.1.17 from EC) to charge a tRNA with glutamate, glutamyl-tRNA reductase (1.2.1.70 from EC) to reduce glutamyl-tRNA to glutamate-1-semialdehyde (GSA), and GSA aminotransferase (5.4.3.8 from EC) to catalyse a transamination reaction to produce ALA. The second stage is to convert ALA to uroporphyrinogen III, the first macrocyclic tetrapyrrolic structure in the pathway. This is achieved by the action of three enzymes in one common pathway: porphobilinogen (PBG) synthase (or ALA dehydratase, 4.2.1.24 from EC) to condense two ALA molecules to generate porphobilinogen; hydroxymethylbilane synthase (or PBG deaminase, 2.5.1.61 from EC) to polymerise four PBG molecules into preuroporphyrinogen (tetrapyrrole structure); and uroporphyrinogen III synthase (4.2.1.75 from EC) to link two pyrrole units together (rings A and D) to yield uroporphyrinogen III. Uroporphyrinogen III is the first branch point of the pathway. To synthesise cobalamin (vitamin B12), sirohaem, and coenzyme F430, uroporphyrinogen III needs to be converted into precorrin-2 by the action of uroporphyrinogen III methyltransferase (2.1.1.107 from EC). To synthesise haem and chlorophyll, uroporphyrinogen III needs to be decarboxylated into coproporphyrinogen III by the action of uroporphyrinogen III decarboxylase (4.1.1.37 from EC) []. This entry represents porphobilinogen (PBG) synthase (PBGS, or 5-aminoaevulinic acid dehydratase, or ALAD, 4.2.1.24 from EC), which functions during the second stage of tetrapyrrole biosynthesis. This enzyme catalyses a Knorr-type condensation reaction between two molecules of ALA to generate porphobilinogen, the pyrrolic building block used in later steps []. The structure of the enzyme is based on a TIM barrel topology made up of eight identical subunits, where each subunit binds to a metal ion that is essential for activity, usually zinc (in yeast, mammals and certain bacteria) or magnesium (in plants and other bacteria). A lysine has been implicated in the catalytic mechanism []. The lack of PBGS enzyme causes a rare porphyric disorder known as ALAD porphyria, which appears to involve conformational changes in the enzyme [.; GO: 0004655 porphobilinogen synthase activity, 0046872 metal ion binding, 0033014 tetrapyrrole biosynthetic process; PDB: 2C1H_A 1W1Z_A 1GZG_B 1W5O_B 1W5Q_B 2C18_A 1B4K_A 2C19_B 1W56_B 2C13_B ....
Probab=44.94 E-value=85 Score=29.78 Aligned_cols=65 Identities=23% Similarity=0.260 Sum_probs=40.5
Q ss_pred HHHHHHHhHHHHHHcCCcEEEEecCCcCCcccchhccCCCCCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHhCCCcE
Q 020056 210 VINSFAYNVKSIYNSGGRSFWIHNTGPLGCYAFVFLYSPSAPALKDSAGCVKPYNELAQYFNLKLKEAVVQLRKAFPSAA 289 (331)
Q Consensus 210 ~v~~i~~~v~~L~~~GAr~~vV~nlpplgc~P~~~~~~~~~~~~~d~~~c~~~~n~l~~~~N~~L~~~l~~l~~~~~~~~ 289 (331)
-++.+.+.++++.++|.+.|+++++.+ |...... | ....+ =|..+++.+..+++.+|+.-
T Consensus 55 sid~l~~~v~~~~~~GI~~v~lFgvi~----~~~Kd~~----------g-s~a~~-----~~g~v~~air~iK~~~pdl~ 114 (324)
T PF00490_consen 55 SIDSLVKEVEEAVDLGIRAVILFGVID----PSKKDEE----------G-SEAYN-----PDGLVQRAIRAIKKAFPDLL 114 (324)
T ss_dssp EHHHHHHHHHHHHHTT--EEEEEEE-S----CSC-BSS------------GGGGS-----TTSHHHHHHHHHHHHSTTSE
T ss_pred CHHHHHHHHHHHHHCCCCEEEEEeeCC----cccCCcc----------h-hcccC-----CCChHHHHHHHHHHhCCCcE
Confidence 367888889999999999999998832 1111111 1 11111 13456778888999999975
Q ss_pred EEEEec
Q 020056 290 FTYVDV 295 (331)
Q Consensus 290 i~~~D~ 295 (331)
+ ..|+
T Consensus 115 v-i~Dv 119 (324)
T PF00490_consen 115 V-ITDV 119 (324)
T ss_dssp E-EEEE
T ss_pred E-EEec
Confidence 4 6776
No 52
>cd04823 ALAD_PBGS_aspartate_rich Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. All of PBGS_aspartate_rich contain an aspartate rich metal binding site with the general sequence DXALDX(Y/F)X3G(H/Q)DG. They also contain an allosteric magnesiu
Probab=44.52 E-value=85 Score=29.69 Aligned_cols=66 Identities=18% Similarity=0.247 Sum_probs=43.4
Q ss_pred HHHHHHHHhHHHHHHcCCcEEEEecCCcCCcccchhccCCCCCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHhCCCc
Q 020056 209 DVINSFAYNVKSIYNSGGRSFWIHNTGPLGCYAFVFLYSPSAPALKDSAGCVKPYNELAQYFNLKLKEAVVQLRKAFPSA 288 (331)
Q Consensus 209 ~~v~~i~~~v~~L~~~GAr~~vV~nlpplgc~P~~~~~~~~~~~~~d~~~c~~~~n~l~~~~N~~L~~~l~~l~~~~~~~ 288 (331)
.-++.+.+.++++.++|.+.|++++++|-. ..... | .+..+. |.-+++.+..+++++|+.
T Consensus 51 ~s~d~l~~~v~~~~~~Gi~~v~lFgv~~~~----~KD~~----------g-s~A~~~-----~g~v~~air~iK~~~p~l 110 (320)
T cd04823 51 LSIDELLKEAEEAVDLGIPAVALFPVTPPE----LKSED----------G-SEAYNP-----DNLVCRAIRAIKEAFPEL 110 (320)
T ss_pred eCHHHHHHHHHHHHHcCCCEEEEecCCCcc----cCCcc----------c-ccccCC-----CChHHHHHHHHHHhCCCc
Confidence 346888889999999999999999984311 01111 1 111111 345677888889999986
Q ss_pred EEEEEec
Q 020056 289 AFTYVDV 295 (331)
Q Consensus 289 ~i~~~D~ 295 (331)
-+ +.|+
T Consensus 111 ~v-i~DV 116 (320)
T cd04823 111 GI-ITDV 116 (320)
T ss_pred EE-EEee
Confidence 54 5676
No 53
>PF08029 HisG_C: HisG, C-terminal domain; InterPro: IPR013115 ATP phosphoribosyltransferase (2.4.2.17 from EC) is the enzyme that catalyzes the first step in the biosynthesis of histidine in bacteria, fungi and plants as shown below. It is a member of the larger phosphoribosyltransferase superfamily of enzymes which catalyse the condensation of 5-phospho-alpha-D-ribose 1-diphosphate with nitrogenous bases in the presence of divalent metal ions []. ATP + 5-phospho-alpha-D-ribose 1-diphosphate = 1-(5-phospho-D-ribosyl)-ATP + diphosphate Histidine biosynthesis is an energetically expensive process and ATP phosphoribosyltransferase activity is subject to control at several levels. Transcriptional regulation is based primarily on nutrient conditions and determines the amount of enzyme present in the cell, while feedback inihibition rapidly modulates activity in response to cellular conditions. The enzyme has been shown to be inhibited by 1-(5-phospho-D-ribosyl)-ATP, histidine, ppGpp (a signal associated with adverse environmental conditions) and ADP and AMP (which reflect the overall energy status of the cell). As this pathway of histidine biosynthesis is present only in prokayrotes, plants and fungi, this enzyme is a promising target for the development of novel antimicrobial compounds and herbicides. This entry represents the C-terminal portion of ATP phosphoribosyltransferase. The enzyme itself exists in equilibrium between an active dimeric form, an inactive hexameric form and higher aggregates [, ]. Interconversion between the various forms is largely reversible and is influenced by the binding of the natural substrates and inhibitors of the enzyme. This domain is not directly involved in catalysis but appears to be responsible for the formation of hexamers induced by the binding of inhibitors to the enzyme, thus regulating activity.; GO: 0000287 magnesium ion binding, 0003879 ATP phosphoribosyltransferase activity, 0000105 histidine biosynthetic process, 0005737 cytoplasm; PDB: 1Q1K_A 1H3D_A 2VD3_B 1NH7_A 1NH8_A.
Probab=44.11 E-value=20 Score=26.35 Aligned_cols=22 Identities=5% Similarity=0.033 Sum_probs=15.9
Q ss_pred HHHHhHHHHHHcCCcEEEEecC
Q 020056 213 SFAYNVKSIYNSGGRSFWIHNT 234 (331)
Q Consensus 213 ~i~~~v~~L~~~GAr~~vV~nl 234 (331)
.+.+.+.+|.++||+.|+|..+
T Consensus 51 ~~~~~~~~Lk~~GA~~Ilv~pi 72 (75)
T PF08029_consen 51 QVWDLMDKLKAAGASDILVLPI 72 (75)
T ss_dssp CHHHHHHHHHCTT-EEEEEEE-
T ss_pred HHHHHHHHHHHcCCCEEEEEec
Confidence 3445578899999999999765
No 54
>COG0113 HemB Delta-aminolevulinic acid dehydratase [Coenzyme metabolism]
Probab=42.16 E-value=53 Score=30.90 Aligned_cols=67 Identities=15% Similarity=0.115 Sum_probs=44.7
Q ss_pred HHHHHHHHHhHHHHHHcCCcEEEEecCCcCCcccchhccCCCCCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHhCCC
Q 020056 208 PDVINSFAYNVKSIYNSGGRSFWIHNTGPLGCYAFVFLYSPSAPALKDSAGCVKPYNELAQYFNLKLKEAVVQLRKAFPS 287 (331)
Q Consensus 208 ~~~v~~i~~~v~~L~~~GAr~~vV~nlpplgc~P~~~~~~~~~~~~~d~~~c~~~~n~l~~~~N~~L~~~l~~l~~~~~~ 287 (331)
.-.++.+.+.++++.++|.+-|+++++|+-+ ..... | ..+..-|..+++.++.+++.+|+
T Consensus 57 r~s~d~l~~~~~~~~~lGi~av~LFgvp~~~----~Kd~~----------g------s~A~~~~givqravr~ik~~~p~ 116 (330)
T COG0113 57 RYSLDRLVEEAEELVDLGIPAVILFGVPDDS----KKDET----------G------SEAYDPDGIVQRAVRAIKEAFPE 116 (330)
T ss_pred eccHHHHHHHHHHHHhcCCCEEEEeCCCccc----ccCcc----------c------ccccCCCChHHHHHHHHHHhCCC
Confidence 3447888888999999999999999998632 11111 1 00112234567888889999995
Q ss_pred cEEEEEec
Q 020056 288 AAFTYVDV 295 (331)
Q Consensus 288 ~~i~~~D~ 295 (331)
. ++..|+
T Consensus 117 l-~iitDv 123 (330)
T COG0113 117 L-VVITDV 123 (330)
T ss_pred e-EEEeee
Confidence 5 445675
No 55
>cd03412 CbiK_N Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), N-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=39.39 E-value=95 Score=24.99 Aligned_cols=52 Identities=12% Similarity=0.101 Sum_probs=35.0
Q ss_pred HHHHHhHHHHHHcCCcEEEEecCCcCCcccchhccCCCCCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHhCCCcEEE
Q 020056 212 NSFAYNVKSIYNSGGRSFWIHNTGPLGCYAFVFLYSPSAPALKDSAGCVKPYNELAQYFNLKLKEAVVQLRKAFPSAAFT 291 (331)
Q Consensus 212 ~~i~~~v~~L~~~GAr~~vV~nlpplgc~P~~~~~~~~~~~~~d~~~c~~~~n~l~~~~N~~L~~~l~~l~~~~~~~~i~ 291 (331)
..+.+.+++|.+.|+++|+|..+ .... | ..| ..|.+.+++++ +|..++.
T Consensus 56 p~~~eaL~~l~~~G~~~V~V~Pl--------~l~~-----------G---------~e~-~di~~~v~~~~--~~~~~i~ 104 (127)
T cd03412 56 DTPEEALAKLAADGYTEVIVQSL--------HIIP-----------G---------EEY-EKLKREVDAFK--KGFKKIK 104 (127)
T ss_pred CCHHHHHHHHHHCCCCEEEEEeC--------eeEC-----------c---------HHH-HHHHHHHHHHh--CCCceEE
Confidence 46677889999999999999654 2222 1 123 56667777776 6777776
Q ss_pred EEe
Q 020056 292 YVD 294 (331)
Q Consensus 292 ~~D 294 (331)
+..
T Consensus 105 ~g~ 107 (127)
T cd03412 105 LGR 107 (127)
T ss_pred Ecc
Confidence 653
No 56
>KOG4079 consensus Putative mitochondrial ribosomal protein mRpS25 [Translation, ribosomal structure and biogenesis]
Probab=38.78 E-value=14 Score=30.33 Aligned_cols=16 Identities=31% Similarity=0.480 Sum_probs=13.8
Q ss_pred HcCCcEEEEecCCcCC
Q 020056 223 NSGGRSFWIHNTGPLG 238 (331)
Q Consensus 223 ~~GAr~~vV~nlpplg 238 (331)
..|||+||++|+|.+.
T Consensus 42 ~~GARdFVfwNipQiQ 57 (169)
T KOG4079|consen 42 QSGARDFVFWNIPQIQ 57 (169)
T ss_pred ccCccceEEecchhhc
Confidence 5799999999999764
No 57
>TIGR03455 HisG_C-term ATP phosphoribosyltransferase, C-terminal domain. This domain corresponds to the C-terminal third of the HisG protein. It is absent in many lineages.
Probab=38.58 E-value=37 Score=26.43 Aligned_cols=23 Identities=9% Similarity=0.167 Sum_probs=19.6
Q ss_pred HHHHHhHHHHHHcCCcEEEEecC
Q 020056 212 NSFAYNVKSIYNSGGRSFWIHNT 234 (331)
Q Consensus 212 ~~i~~~v~~L~~~GAr~~vV~nl 234 (331)
+.+.+.+.+|.++||+.|+|..+
T Consensus 74 ~~v~~~~~~Lk~~GA~~Ilv~~i 96 (100)
T TIGR03455 74 KVVNELIDKLKAAGARDILVLPI 96 (100)
T ss_pred HHHHHHHHHHHHcCCCeEEEech
Confidence 56777889999999999999764
No 58
>PRK13717 conjugal transfer protein TrbI; Provisional
Probab=32.83 E-value=82 Score=25.65 Aligned_cols=27 Identities=15% Similarity=0.196 Sum_probs=23.7
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHhCC
Q 020056 260 VKPYNELAQYFNLKLKEAVVQLRKAFP 286 (331)
Q Consensus 260 ~~~~n~l~~~~N~~L~~~l~~l~~~~~ 286 (331)
.+..+.++..||..|.+.|+++++++.
T Consensus 70 e~q~e~lt~rF~~aL~~~L~~yq~~H~ 96 (128)
T PRK13717 70 EAQSKALSARFNTALEASLQAWQQKHH 96 (128)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 457788999999999999999998873
No 59
>COG1209 RfbA dTDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane]
Probab=32.35 E-value=1.4e+02 Score=27.73 Aligned_cols=35 Identities=20% Similarity=0.385 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHhCCCcEEEEEecchHHHHHHHCCCCCCCccCC
Q 020056 273 KLKEAVVQLRKAFPSAAFTYVDVYSIKYSLFKEPEKYGTSSVS 315 (331)
Q Consensus 273 ~L~~~l~~l~~~~~~~~i~~~D~~~~~~~ii~nP~~yGf~n~~ 315 (331)
.|.+.++.+.++-+|+.+..+-+ +||++||..+..
T Consensus 114 ~l~~~~~~~~~~~~ga~i~~~~V--------~dP~rfGV~e~d 148 (286)
T COG1209 114 GLSELLEHFAEEGSGATILLYEV--------DDPSRYGVVEFD 148 (286)
T ss_pred ChHHHHHHHhccCCCcEEEEEEc--------CCcccceEEEEc
Confidence 78888888888778998887775 599999975543
No 60
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=29.03 E-value=37 Score=26.21 Aligned_cols=6 Identities=33% Similarity=0.390 Sum_probs=2.5
Q ss_pred cchHHH
Q 020056 6 SNSISL 11 (331)
Q Consensus 6 ~~~~~~ 11 (331)
|+.++|
T Consensus 3 SK~~ll 8 (95)
T PF07172_consen 3 SKAFLL 8 (95)
T ss_pred hhHHHH
Confidence 554333
No 61
>cd04236 AAK_NAGS-Urea AAK_NAGS-Urea: N-acetylglutamate (NAG) kinase-like domain of the NAG Synthase (NAGS) of the urea cycle found in animals. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate; NAG is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Ureogenic NAGS activity is dependent on the concentration of glutamate (substrate) and arginine (activator). Domain architecture of ureogenic NAGS consists of an N-terminal NAG kinase-like (ArgB) domain (this CD) and a C-terminal DUF619 domain. Members of this CD belong to the protein superfamily, the Amino Acid Kinase Family (AAKF).
Probab=26.57 E-value=1.9e+02 Score=26.68 Aligned_cols=45 Identities=7% Similarity=0.202 Sum_probs=35.8
Q ss_pred cCcEEEEEecchhhhhhhhcCCChhhhhccHHHHHHHHHHhHHHHHHcCCcEEEEecCCc
Q 020056 177 SQALYTFDIGQNDFTADLFADMPIEKIYASVPDVINSFAYNVKSIYNSGGRSFWIHNTGP 236 (331)
Q Consensus 177 ~~sL~~v~iG~ND~~~~~~~~~s~~~~~~~v~~~v~~i~~~v~~L~~~GAr~~vV~nlpp 236 (331)
++..++|-+|+|=+.. ++..+++.+.+.-|+..|.|-++|.+-+|
T Consensus 34 ~~~f~VIK~GG~~~~~---------------~~~~~~l~~dla~L~~lGl~~VlVHGggp 78 (271)
T cd04236 34 WPAFAVLEVDHSVFRS---------------LEMVQSLSFGLAFLQRMDMKLLVVMGLSA 78 (271)
T ss_pred CCCEEEEEEChhhhcC---------------chhHHHHHHHHHHHHHCCCeEEEEeCCCh
Confidence 5778888999986532 13456777888999999999999999876
No 62
>PF08885 GSCFA: GSCFA family; InterPro: IPR014982 This group of proteins are functionally uncharacterised. They have been named GSCFA after a highly conserved N-terminal motif in the alignment, they are functionally uncharacterised.
Probab=25.46 E-value=1.9e+02 Score=26.48 Aligned_cols=115 Identities=16% Similarity=0.245 Sum_probs=66.4
Q ss_pred cCcEEEEEecchhhhhhh-----hcC--CChh-----hh----hccHHHHHHHHHHhHHHHHHcCCcEEEEecCCcCCcc
Q 020056 177 SQALYTFDIGQNDFTADL-----FAD--MPIE-----KI----YASVPDVINSFAYNVKSIYNSGGRSFWIHNTGPLGCY 240 (331)
Q Consensus 177 ~~sL~~v~iG~ND~~~~~-----~~~--~s~~-----~~----~~~v~~~v~~i~~~v~~L~~~GAr~~vV~nlpplgc~ 240 (331)
+-+++++-.|..-....- ..+ +... +. .--+.++++.+...++.|.+..-+-=+|+++.|+
T Consensus 101 ~ad~~iiTLGtaevw~~~~~g~vv~nc~k~p~~~F~~~~~~f~~ls~~ei~~~l~~~~~~l~~~nP~~kiilTVSPV--- 177 (251)
T PF08885_consen 101 EADVFIITLGTAEVWRDRETGRVVANCHKVPAGQFDPERYEFRNLSVEEILEDLEAIIDLLRSINPDIKIILTVSPV--- 177 (251)
T ss_pred hCCEEEEeCCcHHHheeCCCCEEEecCCCccccccchhhhhhccCCHHHHHHHHHHHHHHHHhhCCCceEEEEeccc---
Confidence 456778888988765311 011 0000 11 1335677788888888887776655566688775
Q ss_pred cchhccCCCCCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHhCCCcEEEEEecchHHHHHHHCCCC
Q 020056 241 AFVFLYSPSAPALKDSAGCVKPYNELAQYFNLKLKEAVVQLRKAFPSAAFTYVDVYSIKYSLFKEPEK 308 (331)
Q Consensus 241 P~~~~~~~~~~~~~d~~~c~~~~n~l~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~ii~nP~~ 308 (331)
|...+.... | + -..|.+++ ..|+..+.+|.++++ ++.||-.|.++.+-..++.-
T Consensus 178 rl~~T~~~~-----d--~--~~an~~SK---s~Lr~a~~~l~~~~~--~v~YFPSYEiv~d~lrdyrf 231 (251)
T PF08885_consen 178 RLIATFRDR-----D--G--LVANQYSK---STLRAAAHELVRAFD--DVDYFPSYEIVMDELRDYRF 231 (251)
T ss_pred hhhcccccc-----c--c--hhhhhhhH---HHHHHHHHHHHhcCC--CceEcchHhhccCccccccc
Confidence 443433210 1 1 12223332 467788888888764 66789998888765555433
No 63
>PF08331 DUF1730: Domain of unknown function (DUF1730); InterPro: IPR013542 This domain of unknown function occurs in iron-sulphur cluster-binding proteins together with the 4Fe-4S binding domain (IPR001450 from INTERPRO).
Probab=24.94 E-value=2.1e+02 Score=20.83 Aligned_cols=66 Identities=17% Similarity=0.150 Sum_probs=32.7
Q ss_pred cCCcEEEEecCCcCCcccchhccCCCCCCCCCCCCCchhhh---HHHHHHHHHHHHHHHHHHHhCCCcEE-EEEec
Q 020056 224 SGGRSFWIHNTGPLGCYAFVFLYSPSAPALKDSAGCVKPYN---ELAQYFNLKLKEAVVQLRKAFPSAAF-TYVDV 295 (331)
Q Consensus 224 ~GAr~~vV~nlpplgc~P~~~~~~~~~~~~~d~~~c~~~~n---~l~~~~N~~L~~~l~~l~~~~~~~~i-~~~D~ 295 (331)
-|||.|+++.+|=..-.|....... ...+..+... +.-...-++|++..+.|+++.|+.++ .++|+
T Consensus 9 p~arSvIv~a~~Y~~~~~~~~~~~~------~~~g~iarYA~G~DYH~vlk~~L~~l~~~i~~~~~~~~~r~~VDT 78 (78)
T PF08331_consen 9 PGARSVIVLAFPYYPEPPPPPPPPG------PGRGRIARYAWGRDYHKVLKKKLEQLAEWIRELGPDFEYRIFVDT 78 (78)
T ss_pred CCCcEEEEEEccCCCccccccccCC------CCCeeEeehhccCChHHHHHHHHHHHHHHHHHHCCCCCeEEeecC
Confidence 5899999998864331111000000 1123333322 22233345666666777778887533 34553
No 64
>KOG0907 consensus Thioredoxin [Posttranslational modification, protein turnover, chaperones]
Probab=23.35 E-value=1.2e+02 Score=23.66 Aligned_cols=32 Identities=22% Similarity=0.282 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEecchHHHHHHH
Q 020056 272 LKLKEAVVQLRKAFPSAAFTYVDVYSIKYSLFK 304 (331)
Q Consensus 272 ~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~ii~ 304 (331)
+.+.-.+.+|..+||++.|+-+|+.. ..++.+
T Consensus 37 k~i~P~~~~La~~y~~v~Flkvdvde-~~~~~~ 68 (106)
T KOG0907|consen 37 KAIAPKFEKLAEKYPDVVFLKVDVDE-LEEVAK 68 (106)
T ss_pred hhhhhHHHHHHHHCCCCEEEEEeccc-CHhHHH
Confidence 34556888999999999999999998 555444
No 65
>TIGR02744 TrbI_Ftype type-F conjugative transfer system protein TrbI. This protein is an essential component of the F-type conjugative transfer sytem for plasmid DNA transfer and has been shown to be localized to the periplasm.
Probab=23.33 E-value=1.5e+02 Score=23.59 Aligned_cols=26 Identities=15% Similarity=0.124 Sum_probs=23.3
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHhC
Q 020056 260 VKPYNELAQYFNLKLKEAVVQLRKAF 285 (331)
Q Consensus 260 ~~~~n~l~~~~N~~L~~~l~~l~~~~ 285 (331)
.++.+.++..||..|.+.|++++++|
T Consensus 57 e~q~~~~~~rF~~~L~~~L~~yq~~H 82 (112)
T TIGR02744 57 EAQQKALLGRFNALLEAELQAWQAQH 82 (112)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 45678889999999999999999987
No 66
>PF15284 PAGK: Phage-encoded virulence factor
Probab=20.82 E-value=40 Score=23.66 Aligned_cols=29 Identities=21% Similarity=0.083 Sum_probs=17.8
Q ss_pred CCCCCcchHHHHHHHHHHhhhcccCCCCC
Q 020056 1 MQQLPSNSISLFCFFCMLLSSSYAKPRIS 29 (331)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 29 (331)
|+++=+.+|.+++.|....+++.+.++.+
T Consensus 1 Mkk~ksifL~l~~~LsA~~FSasamAa~~ 29 (61)
T PF15284_consen 1 MKKFKSIFLALVFILSAAGFSASAMAADS 29 (61)
T ss_pred ChHHHHHHHHHHHHHHHhhhhHHHHHHhh
Confidence 66666777777766666655555544433
No 67
>cd03411 Ferrochelatase_N Ferrochelatase, N-terminal domain: Ferrochelatase (protoheme ferrolyase or HemH) is the terminal enzyme of the heme biosynthetic pathway. It catalyzes the insertion of ferrous iron into the protoporphyrin IX ring yielding protoheme. This enzyme is ubiquitous in nature and widely distributed in bacteria and eukaryotes. Recently, some archaeal members have been identified. The oligomeric state of these enzymes varies depending on the presence of a dimerization motif at the C-terminus.
Probab=20.41 E-value=1e+02 Score=25.72 Aligned_cols=24 Identities=8% Similarity=0.062 Sum_probs=19.3
Q ss_pred HHHhHHHHHHcCCcEEEEecCCcC
Q 020056 214 FAYNVKSIYNSGGRSFWIHNTGPL 237 (331)
Q Consensus 214 i~~~v~~L~~~GAr~~vV~nlppl 237 (331)
+.+.|++|.+.|+++++|+.+-|.
T Consensus 101 i~~~l~~l~~~g~~~iivlPl~P~ 124 (159)
T cd03411 101 IEEALEELKADGVDRIVVLPLYPQ 124 (159)
T ss_pred HHHHHHHHHHcCCCEEEEEECCcc
Confidence 345678899999999999888663
Done!