BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020059
(331 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|297739715|emb|CBI29897.3| unnamed protein product [Vitis vinifera]
Length = 479
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 236/319 (73%), Positives = 274/319 (85%), Gaps = 2/319 (0%)
Query: 13 LKATGLACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEA 72
L++ GL+ LLQSGKRV+SELDFAA+++PRSIKILAVTGTNGKSTV TF GQML+HLGIE
Sbjct: 87 LESHGLSFLLQSGKRVLSELDFAAEILPRSIKILAVTGTNGKSTVATFSGQMLSHLGIEV 146
Query: 73 FVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDH 132
FVGGNLG PLSEAA C+ PS KP FQVAVVEVSSYQ+E+PNK+FCP+V+VVLNLT DH
Sbjct: 147 FVGGNLGIPLSEAAIQCLTCPSPKPVFQVAVVEVSSYQLEVPNKHFCPSVAVVLNLTSDH 206
Query: 133 LERHKTMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKG--HRFNLAWIGAFPGVKI 190
LERHKTMKNYA+TKC L SHM N+KLG+LPFGN+ LNEA++ + NLAWIGAFPGVK+
Sbjct: 207 LERHKTMKNYAITKCRLLSHMTNSKLGILPFGNKLLNEAMEELVNEVNLAWIGAFPGVKV 266
Query: 191 DTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIE 250
D E K AS VPA+GVVS+L+L + VMG HNY+NAAVAALSVLGLD+G+D EA++STIE
Sbjct: 267 DKEEKVASLRVPAIGVVSELKLGALNVMGTHNYYNAAVAALSVLGLDMGIDTEAISSTIE 326
Query: 251 ILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQE 310
LR PPHRMQIVH+D GVTW+DDSKATN+EAT TGL+ LK K VILLGG AKV N QE
Sbjct: 327 KLRVPPHRMQIVHKDSYGVTWIDDSKATNVEATYTGLLGLKEQKSVILLGGLAKVSNSQE 386
Query: 311 SNGFEKLIEPLNHHRCVIT 329
SNGFE+L+EPL +HRCVIT
Sbjct: 387 SNGFEQLVEPLKYHRCVIT 405
>gi|147779061|emb|CAN60311.1| hypothetical protein VITISV_002512 [Vitis vinifera]
Length = 806
Score = 368 bits (945), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 178/248 (71%), Positives = 206/248 (83%), Gaps = 2/248 (0%)
Query: 59 TFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYF 118
T ML+HLGIE FVGGNLG PLSEAA C+ PS KP FQVAVVEVSSYQ+E+PNK+F
Sbjct: 234 TLAFPMLSHLGIEVFVGGNLGIPLSEAAIQCLTCPSPKPVFQVAVVEVSSYQLEVPNKHF 293
Query: 119 CPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKG--HR 176
CP+V+VVLNLT DHLERHKTMKNYA+TKC L SHM N+KLG+LPFGN+ LNEA++ +
Sbjct: 294 CPSVAVVLNLTSDHLERHKTMKNYAITKCRLLSHMTNSKLGILPFGNKLLNEAMEELVNE 353
Query: 177 FNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGL 236
NLAWIGAFPGVK+D E K AS VPA+GVVS+L+L + VMG HNY+NAAVAALSVLGL
Sbjct: 354 VNLAWIGAFPGVKVDKEEKVASLRVPAIGVVSELKLGALNVMGTHNYYNAAVAALSVLGL 413
Query: 237 DIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCV 296
D+G+D EA++STIE LR PPHRMQIVH+D GVTW+DDSKATN+EAT TGL+ LK K V
Sbjct: 414 DMGIDTEAISSTIEKLRVPPHRMQIVHKDSYGVTWIDDSKATNVEATYTGLLGLKEQKSV 473
Query: 297 ILLGGQAK 304
ILLGG AK
Sbjct: 474 ILLGGLAK 481
>gi|302753318|ref|XP_002960083.1| hypothetical protein SELMODRAFT_229823 [Selaginella moellendorffii]
gi|300171022|gb|EFJ37622.1| hypothetical protein SELMODRAFT_229823 [Selaginella moellendorffii]
Length = 492
Score = 319 bits (818), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 158/316 (50%), Positives = 212/316 (67%), Gaps = 7/316 (2%)
Query: 18 LACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGN 77
LA + SG +SEL FAA+ P+++KI AVTGTNGKSTV TF GQ+L G+ FVGGN
Sbjct: 102 LAYAMDSGIPTISELGFAAEAFPKAVKIAAVTGTNGKSTVTTFTGQILQQAGVRTFVGGN 161
Query: 78 LGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK 137
LG P S+AA C PS P +Q AV+EVSSYQ+E+P F P+V V+LNL+PDHLERHK
Sbjct: 162 LGTPFSDAACECFKFPSDDPPYQAAVLEVSSYQLELPGS-FSPSVGVILNLSPDHLERHK 220
Query: 138 TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNL----AWIGAFPGVKIDTE 193
+M+NY TKC LF M ++KL ++P ++ L + +++N AW+GA PGV++D++
Sbjct: 221 SMENYGETKCRLFERMDSSKLSIIPHADEFLRKV--AYKYNSGSTKAWLGALPGVQLDSQ 278
Query: 194 AKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILR 253
A+ A VP ++L L +K +G HN NAA A+L L LD+GVD L + I L
Sbjct: 279 ARRAVVVVPTTKAEARLYLSGLKAVGSHNAQNAATASLLSLALDVGVDEHKLQAAIGQLT 338
Query: 254 TPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNG 313
PHRMQIV +D +GV W++DSKATN++A TG+ L K VILLGG AKVL+ S G
Sbjct: 339 PLPHRMQIVGQDKKGVLWINDSKATNVDAAYTGIKGLADRKAVILLGGLAKVLDEDGSLG 398
Query: 314 FEKLIEPLNHHRCVIT 329
F+KL + L +HR ++T
Sbjct: 399 FKKLSDLLQNHRAIVT 414
>gi|302804608|ref|XP_002984056.1| hypothetical protein SELMODRAFT_119501 [Selaginella moellendorffii]
gi|300148408|gb|EFJ15068.1| hypothetical protein SELMODRAFT_119501 [Selaginella moellendorffii]
Length = 492
Score = 315 bits (808), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 155/316 (49%), Positives = 211/316 (66%), Gaps = 7/316 (2%)
Query: 18 LACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGN 77
LA + SG +SEL AA+ P+++KI AVTGTNGKSTV TF GQ+L G+ F+GGN
Sbjct: 102 LAYAMDSGIPTISELGLAAEAFPKAVKIAAVTGTNGKSTVTTFTGQILQQAGVRTFIGGN 161
Query: 78 LGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK 137
LG P S+AA C PS P +QV V+EVSSYQ+E+P F P+V V+LNL+PDHLERHK
Sbjct: 162 LGTPFSDAACECFKFPSDDPPYQVTVLEVSSYQLELPGS-FSPSVGVILNLSPDHLERHK 220
Query: 138 TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNL----AWIGAFPGVKIDTE 193
+M+NY TKC LF M ++KL ++P ++ L + +++N AW+GA PG+++D++
Sbjct: 221 SMENYGETKCRLFERMDSSKLSIIPHADEFLRKV--AYKYNSGSTKAWLGALPGIQLDSQ 278
Query: 194 AKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILR 253
A+ A VP ++L L +K +G HN NAA A+L L LD+GVD L + I L
Sbjct: 279 ARRAVVVVPTTKAEARLYLSGLKAVGSHNAQNAATASLLSLALDVGVDEHKLQAAIGQLT 338
Query: 254 TPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNG 313
PHRMQIV +D +GV W++DSKATN++A TG+ L K VILLGG AKVL+ S G
Sbjct: 339 PLPHRMQIVGQDKKGVLWINDSKATNVDAAYTGIKGLADRKAVILLGGLAKVLDQDGSLG 398
Query: 314 FEKLIEPLNHHRCVIT 329
F+KL + L +HR ++T
Sbjct: 399 FKKLSDLLQNHRAIVT 414
>gi|168039117|ref|XP_001772045.1| predicted protein [Physcomitrella patens subsp. patens]
gi|76880192|dbj|BAE45867.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Physcomitrella
patens]
gi|162676646|gb|EDQ63126.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 521
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 154/313 (49%), Positives = 207/313 (66%), Gaps = 3/313 (0%)
Query: 18 LACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGN 77
+A +Q+G SEL FAA +P +IK+ AVTGTNGKSTV TF Q+L + G+ FVGGN
Sbjct: 134 IAAAIQAGVPAFSELGFAAAALPGNIKVAAVTGTNGKSTVTTFTSQILRNAGVRTFVGGN 193
Query: 78 LGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK 137
LG PLS+ C+A P+ P F VAVVEVSSYQ+E+P F P +V+LNLTPDHLERHK
Sbjct: 194 LGTPLSDGVLQCLAFPAEDPPFSVAVVEVSSYQLELPGS-FHPKAAVILNLTPDHLERHK 252
Query: 138 TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNE--AIKGHRFNLAWIGAFPGVKIDTEAK 195
+M+ Y KC +FS M + + ++P + L A+ G + AW+G PGV++D +A+
Sbjct: 253 SMEAYGSIKCRVFSRMEASDVAIIPQSDVLLRRLAAMSGSQATRAWMGGLPGVQLDKDAR 312
Query: 196 TASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTP 255
A VP GV ++L L +++ +G HN HNA AAL L LD+G+ E + + I L+ P
Sbjct: 313 RAIVVVPTTGVEARLYLSSLQAVGTHNAHNAGTAALLALSLDVGLQSEDIQAAIPHLKAP 372
Query: 256 PHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFE 315
PHRM+IVH+D QGV WV+DSKATN+++T G+ + G K V+LLGGQAKV G GF
Sbjct: 373 PHRMEIVHQDDQGVVWVNDSKATNVDSTSVGIRSIVGKKAVVLLGGQAKVGVGSGGLGFG 432
Query: 316 KLIEPLNHHRCVI 328
L+E L HR V+
Sbjct: 433 VLVESLQSHRAVV 445
>gi|302804600|ref|XP_002984052.1| hypothetical protein SELMODRAFT_119124 [Selaginella moellendorffii]
gi|300148404|gb|EFJ15064.1| hypothetical protein SELMODRAFT_119124 [Selaginella moellendorffii]
Length = 492
Score = 307 bits (787), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 159/316 (50%), Positives = 212/316 (67%), Gaps = 7/316 (2%)
Query: 18 LACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGN 77
LA + SG +SEL FAA+ P+++KI AVTGTNGKSTV TF GQ+L G+ FVGGN
Sbjct: 102 LAYAMDSGIPTISELGFAAEAFPKAVKIAAVTGTNGKSTVTTFTGQILQQAGVRTFVGGN 161
Query: 78 LGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK 137
LG P S+AA C PS P +QV V+EVSSYQ+E+P F P+V V+LNL+PDHLERHK
Sbjct: 162 LGTPFSDAACECFMFPSDDPPYQVTVLEVSSYQLELPGS-FSPSVGVILNLSPDHLERHK 220
Query: 138 TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNL----AWIGAFPGVKIDTE 193
+M+NY TKC LF M ++KL ++P G++ L + +++N AW+GA PGV++D +
Sbjct: 221 SMENYGETKCRLFERMDSSKLSIIPHGDEFLRKV--AYKYNSGSTKAWLGALPGVQLDNQ 278
Query: 194 AKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILR 253
A+ A VP ++L L +K +G HN NAA A+L L LD+GVD L + I L
Sbjct: 279 ARRAVVVVPTTKAEARLYLSGLKAVGSHNAQNAATASLLSLALDLGVDEHKLQAAIGQLT 338
Query: 254 TPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNG 313
PHRMQIV +D +GV W++DSKATN++A TG+ L K VILLGG AKVL+ S G
Sbjct: 339 PLPHRMQIVGQDKKGVLWINDSKATNVDAAYTGIKGLADRKAVILLGGLAKVLDQDGSLG 398
Query: 314 FEKLIEPLNHHRCVIT 329
F+KL + L +HR ++T
Sbjct: 399 FKKLSDLLQNHRAIVT 414
>gi|147774763|emb|CAN60280.1| hypothetical protein VITISV_028258 [Vitis vinifera]
Length = 926
Score = 283 bits (725), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 154/296 (52%), Positives = 184/296 (62%), Gaps = 77/296 (26%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
+ SGKR++S+LDFAA+++PRSIKILA TGTNGKST+ TF GQML+HLGIE
Sbjct: 432 MHSGKRILSKLDFAAEILPRSIKILAATGTNGKSTIATFSGQMLSHLGIE---------- 481
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
VAVVEVSSYQ+E+PNK+FCP++ V LNLT DHLERHKTMKN
Sbjct: 482 -------------------VAVVEVSSYQLEVPNKHFCPSIVVGLNLTSDHLERHKTMKN 522
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEV 201
YA+TK L + V
Sbjct: 523 YAITKKRLPVY------------------------------------------------V 534
Query: 202 PAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQI 261
PA+GVVS+L+L + VMGRHNY+N AVAALS LGLD+ +D EA++STIE LR PPHRMQI
Sbjct: 535 PAIGVVSKLKLGALNVMGRHNYYNVAVAALSDLGLDMXIDTEAISSTIEKLRVPPHRMQI 594
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKL 317
VH+D VTW+DDSKATN+EAT GL+ L K VI LGG AKV N QES+GFE L
Sbjct: 595 VHKDSYEVTWIDDSKATNVEATYIGLLGLNEQKSVIPLGGLAKVSNSQESDGFEPL 650
>gi|225454866|ref|XP_002275450.1| PREDICTED: UDP-N-acetylmuramoylalanine--D-glutamate ligase-like
[Vitis vinifera]
Length = 307
Score = 279 bits (714), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 159/308 (51%), Positives = 191/308 (62%), Gaps = 70/308 (22%)
Query: 13 LKATGLACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEA 72
L++ GL+ LLQSGKR++S+LDFAA+++PRSIKILA TGTNGKST+ TF GQML+HLGIE
Sbjct: 10 LESHGLSFLLQSGKRILSKLDFAAEILPRSIKILAATGTNGKSTIATFSGQMLSHLGIEV 69
Query: 73 FVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDH 132
V GNLG PLSEAA C+ PS KP FQVAVVEVSSYQ+E+PNK+FCP+V V L+LT DH
Sbjct: 70 IVEGNLGIPLSEAAIQCLTCPSPKPVFQVAVVEVSSYQLEVPNKHFCPSVVVGLDLTSDH 129
Query: 133 LERHKTMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDT 192
LERHKTMKNYA+TKC L SHM N+KLG+LPF L+ +G G IDT
Sbjct: 130 LERHKTMKNYAITKCRLLSHMSNSKLGILPFVAA------------LSVLGLDMG--IDT 175
Query: 193 EAKTASFE---VPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTI 249
EA +++ E VP H M++
Sbjct: 176 EAISSTIEKLRVPP---------HRMQI-------------------------------- 194
Query: 250 EILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQ 309
VH+D VTW+DDSKATN+EAT GL+ L K VI LGG AKV N Q
Sbjct: 195 ------------VHKDSYEVTWIDDSKATNVEATYIGLLGLNEQKSVIPLGGLAKVSNSQ 242
Query: 310 ESNGFEKL 317
ES+GFE L
Sbjct: 243 ESDGFEPL 250
>gi|303273586|ref|XP_003056153.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462237|gb|EEH59529.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 647
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 126/383 (32%), Positives = 174/383 (45%), Gaps = 84/383 (21%)
Query: 20 CLLQSGKR--VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGN 77
C + G + V+SEL FA+Q +P+ + I+A++GTNGKSTV +F Q+L F+GGN
Sbjct: 199 CQTKQGSKCTVISELAFASQCLPKMLPIVAISGTNGKSTVCSFTAQLLASCDCRTFMGGN 258
Query: 78 LGNPLSEAAF----------HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLN 127
+G PLS+ A H L P + AVVE SSYQ++ P + +LN
Sbjct: 259 IGKPLSDCALEFILAEHICGHLADLGHHWP-YDAAVVECSSYQLDHPGTLRF-DAACILN 316
Query: 128 LTPDHLERHKTMKNYALTKCHLFSHMVNT-KLGLLP-----------------FGNQHL- 168
LTPDHLERHK+M NYA K +F+ + T L +LP H+
Sbjct: 317 LTPDHLERHKSMANYATAKTQIFAGLRGTHTLAVLPKRESARGRHQSYQVESDSTTDHIV 376
Query: 169 -----------------------------NEAIKGHRFNLAWIGAFPGVKIDTEAKTASF 199
NE + LA IG+ PGVK+D K A
Sbjct: 377 DLDYDGATLLEKCREAVIKTLMRRVSETPNERVACIGGRLAHIGSLPGVKVDLNTKIAIV 436
Query: 200 EVPAVGVV------SQLQLHNMKVMGRHNYHNAAVAALSVLGLD-IGVDVEALNSTIEIL 252
+P+ S + L + +G HN NA++A L L V L ++ L
Sbjct: 437 HLPSNRSSSRQNSPSYVDLSAVSSLGTHNILNASIALLMAHSLSPKDFTVARLKVGLDRL 496
Query: 253 RTPPHRMQIVHR----DIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNG 308
+ PHRMQ+V + +G+ WV+DSKATN+EA GL G +A G
Sbjct: 497 KLLPHRMQLVAQTGNPSFRGIHWVNDSKATNIEAAIVGLQS---------YGRRALAKTG 547
Query: 309 QESN--GFEKLIEPLNHHRCVIT 329
SN GF L+ L H+ VIT
Sbjct: 548 TASNELGFAALVPALLKHQGVIT 570
>gi|253997371|ref|YP_003049435.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Methylotenera
mobilis JLW8]
gi|253984050|gb|ACT48908.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Methylotenera
mobilis JLW8]
Length = 452
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 97/323 (30%), Positives = 158/323 (48%), Gaps = 52/323 (16%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
+Q G V+ +++ AQ P S K++A+TG NGK+TV T VG+M G++ V GN+G P
Sbjct: 90 IQRGIPVVGDVELFAQYRPTSAKLIAITGANGKTTVTTLVGEMCKSAGLKTIVAGNIGLP 149
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
+ + L P V V+E+SS+Q+E N + +LNL+ DH++R+ +M++
Sbjct: 150 VLD------TLSMETP--DVYVLELSSFQLETTNSLLA-DAATMLNLSEDHMDRYDSMQS 200
Query: 142 YALTKCHLFSH---------------MVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFP 186
YA+ K H+F H M KL + FG L++ + + + +
Sbjct: 201 YAVAKAHIFYHAKLQVLNRDDAWSLMMARAKLAQVTFG---LDDVVAEQDYGIKQVNGET 257
Query: 187 GVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALN 246
+ + G + + ++K+ G HN NA A G IG+D +
Sbjct: 258 WL--------------SCGTHDLMNIRDLKIAGLHNASNALAAMALCRG--IGLDFAPII 301
Query: 247 STIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVL 306
T+ + PHR++ V +I V + DDSK TN+ ATC L L K V++ GG+ K
Sbjct: 302 QTLYNFKGLPHRVEWV-ANIDDVDYYDDSKGTNVGATCAALSGLS-QKVVLIAGGEGK-- 357
Query: 307 NGQESNGFEKLIEPLN-HHRCVI 328
GQ+ F L E ++ + R V+
Sbjct: 358 -GQD---FSPLKEAVSTNARAVV 376
>gi|251772197|gb|EES52767.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Leptospirillum
ferrodiazotrophum]
Length = 488
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 104/327 (31%), Positives = 156/327 (47%), Gaps = 50/327 (15%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAA- 86
+ EL++AA + R ++A+ GTNGKST VG +L G F+GGN G P SE
Sbjct: 100 IRGELEWAASLWDR--PVVAIGGTNGKSTTTALVGHLLKSAGFSPFIGGNFGVPFSEGVR 157
Query: 87 -FHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALT 145
+ F VAV+EVSS+Q E + F P + ++LN+TPDHL+R+ ++ Y L
Sbjct: 158 LMRTARKEGKRDPFDVAVIEVSSFQTE-SMQSFSPDIYLLLNITPDHLDRYDSLAQYRLA 216
Query: 146 KCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVG 205
K H+ S + + E + ++G S E+P G
Sbjct: 217 KLHVASLFSPSTTVIWNASQDDWREWGPRTKARSVFVG--------------SAELPGPG 262
Query: 206 VV---SQLQLHNM-----------KVMGRHNYHNAAVAALS--VLGLDIG--VDVEALNS 247
VV S LQ H + +++G N N A + L+ +LG +G +D L
Sbjct: 263 VVLSGSHLQSHGLRDSFSVSTAGYRLIGGGNLQNLAFSVLATILLGETMGRRIDPGILEE 322
Query: 248 TIEILRTPPHRMQIVHRDIQGVTWVDDSKATN---LEATCTGLMDLKGHKCVILLGGQAK 304
I PHRM+ V ++GVT+V+DSKATN +EA GL D+ GH V+L
Sbjct: 323 AIASFTGLPHRMERVA-TVRGVTFVNDSKATNVGAVEAALAGLSDV-GHPHVVL------ 374
Query: 305 VLNGQESNGFEKLIEPL--NHHRCVIT 329
++ G++ G + + P NH R V+
Sbjct: 375 IMGGRDKGGSYRPLIPWLKNHVREVVA 401
>gi|51246751|ref|YP_066635.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Desulfotalea
psychrophila LSv54]
gi|62900515|sp|Q6AJ52.1|MURD_DESPS RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|50877788|emb|CAG37628.1| related to UDP-N-acetylmuramoylalanine-D-glutamate ligase
[Desulfotalea psychrophila LSv54]
Length = 456
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/288 (34%), Positives = 142/288 (49%), Gaps = 19/288 (6%)
Query: 18 LACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGN 77
LA L ++G +V+ EL AA V+ R ++A+TGTNGK+TV + VG +L G FVGGN
Sbjct: 91 LARLRRAGVQVLGELALAAPVLDR--PVVAITGTNGKTTVTSLVGDLLRASGKRVFVGGN 148
Query: 78 LGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK 137
+G PL + L SS + V V+EVSS+Q+E+ F P ++++LNL+PDHL+RH
Sbjct: 149 IGVPL-------LDLLSSGDEVDVIVLEVSSFQLELAGD-FSPHIALLLNLSPDHLDRHG 200
Query: 138 TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTA 197
+ Y K HLF T + ++ G+ L G ++ F D
Sbjct: 201 DLAGYRAAKMHLFQKQGMTDIAIVS-GDDPLCLLSDGCGEASRYLFGFSAAS-DISVAAG 258
Query: 198 SFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIG-VDVEALNSTIEILRTPP 256
FE G L + + R + NAA AA L D+E I
Sbjct: 259 HFEFDFAGQREIYSLRDSALDNRTGWLNAAPAAFIARSLACAKADIE---RGIAAFTLDA 315
Query: 257 HRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
HRM+ V I GV + +DSKATN A + L L + +++ GG+ K
Sbjct: 316 HRMEPVA-SIAGVQYYNDSKATNTGAVISALQQLV--RVILIAGGRDK 360
>gi|218780973|ref|YP_002432291.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Desulfatibacillum
alkenivorans AK-01]
gi|254766048|sp|B8FBS0.1|MURD_DESAA RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|218762357|gb|ACL04823.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Desulfatibacillum
alkenivorans AK-01]
Length = 450
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/295 (33%), Positives = 153/295 (51%), Gaps = 29/295 (9%)
Query: 18 LACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGN 77
L + G V+ E++ A++ I I+AVTGTNGK+TV + +G+M+ GI AFVGGN
Sbjct: 85 LEAAREKGVPVIGEVELASRFI--QAPIIAVTGTNGKTTVTSLIGEMMEASGISAFVGGN 142
Query: 78 LGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK 137
+GNPL + + K QV V E+SS+Q++ + F P V+++ N+T DH++R+
Sbjct: 143 IGNPL-------VNYAKGEDKAQVVVAEISSFQLDTI-ESFAPKVALLTNVTEDHMDRYD 194
Query: 138 TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTA 197
M+ YA +K +F + +L G + A+ G W F G + + EA A
Sbjct: 195 GMEGYAASKARVFMNQTGADFAILN-GCDKWSRAMCGGIKASQWF--FTG-REEAEAGIA 250
Query: 198 SFEVPAVGVVSQLQLH------NMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEI 251
A+ + Q H M + G HN NAA AAL+ VE + I+
Sbjct: 251 -MNAGAMDFFTGAQKHWSLSLKKMTLSGEHNKENAAAAALAAYAAG--ASVEGIQGAIDA 307
Query: 252 LRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVI--LLGGQAK 304
+ PHR++ V R++ V + DDSKATN++A L L+G + ++GG+ K
Sbjct: 308 FKGLPHRLEFV-REVMDVKYYDDSKATNVDAV---LRALEGFNAPVHLIMGGRDK 358
>gi|269792481|ref|YP_003317385.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Thermanaerovibrio
acidaminovorans DSM 6589]
gi|269100116|gb|ACZ19103.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Thermanaerovibrio
acidaminovorans DSM 6589]
Length = 462
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 96/290 (33%), Positives = 144/290 (49%), Gaps = 28/290 (9%)
Query: 25 GKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSE 84
G + E+DF + ++ VTG+NGK+T + +G +LN G+ V GN+GNPL
Sbjct: 92 GMPTVGEVDFVFPFL--GSPVVGVTGSNGKTTTTSILGHVLNAAGVSTAVAGNIGNPLG- 148
Query: 85 AAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVS----VVLNLTPDHLERHKTMK 140
++P S + V E+SS+Q+ ++C S VV NL PDH++ H + +
Sbjct: 149 ------SVPLSGETPSLVVAELSSFQL-----HWCEEASFAGGVVTNLAPDHIDWHGSYE 197
Query: 141 NYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKG--HRFNLAWIGAFPGVKIDTEAKTAS 198
NY L K L ++ + + G + L+W GV +D A+ A
Sbjct: 198 NYVLAKRRLIERTGPDGFAVVQLADLDILRGGSGSVRLYPLSWDKVEQGVHLDDAAQVAL 257
Query: 199 FEVPAVGVVSQL-QLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPH 257
+ G V +L + ++++GRHN NAA+ AL L + + + I PPH
Sbjct: 258 LLMN--GSVRELFRFDQVRLLGRHNLENAAM-ALCAANLVLNRPLNGEDGRIGEFMAPPH 314
Query: 258 RMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLK---GHKCVILLGGQAK 304
R ++V R GVT+VDDSK TN+ AT T L LK G VILLGG+ K
Sbjct: 315 RCELVGR-YGGVTFVDDSKGTNVAATVTALRSLKCDPGGTKVILLGGRGK 363
>gi|149922481|ref|ZP_01910913.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Plesiocystis
pacifica SIR-1]
gi|149816676|gb|EDM76168.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Plesiocystis
pacifica SIR-1]
Length = 468
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/268 (34%), Positives = 131/268 (48%), Gaps = 14/268 (5%)
Query: 40 PRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKF 99
PRS++ +TGTNGKSTV G +L G F GGNLG PLSE P
Sbjct: 121 PRSLETALITGTNGKSTVTALTGALLEAGGRSTFTGGNLGVPLSELVLAVARGEREAP-- 178
Query: 100 QVAVVEVSSYQMEIPNKYFCPTVSV--VLNLTPDHLERHKTMKNYALTKCHLFSHMVNTK 157
+ V+E SSYQ+E + P VSV +LN++PDHL+R+ ++++YA TK +F +
Sbjct: 179 EALVLECSSYQLETLRVHGSPAVSVAMLLNVSPDHLDRYDSLEHYAETKGRVFGGLEPGG 238
Query: 158 LGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKV 217
L LL ++ A G AS E +G + + +
Sbjct: 239 LALLS-ARDAFTPRLRRFVPEAARCVLVDGEDDRPRLSDASLE---LGAGESIDRRALAL 294
Query: 218 MGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQ-IVHRDIQGVTWVDDSK 276
GRHN NA A L+ L GV ++ +T+ + PHRM I RD GV + DDSK
Sbjct: 295 AGRHNALNALFAVLAARHL--GVSLDTCEATLRRFQALPHRMNPIAERD--GVRYFDDSK 350
Query: 277 ATNLEATCTGLMDLKGHKCVILLGGQAK 304
ATN+ + GL + V++ GG+AK
Sbjct: 351 ATNVASVLAGLDGFE-QTFVLICGGRAK 377
>gi|383788843|ref|YP_005473412.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Caldisericum exile
AZM16c01]
gi|381364480|dbj|BAL81309.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Caldisericum exile
AZM16c01]
Length = 448
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 144/287 (50%), Gaps = 16/287 (5%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
L G +++ EL+FA P + KI+A+TGTNGKST G + VGGNLG
Sbjct: 83 LESKGIKIIGELEFANMFSPNT-KIIAITGTNGKSTTTALTGHIFKLFNQNTVVGGNLGT 141
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMK 140
P SE + L + P++ AV+E S +Q+E +Y P VSV LN T DHL+R+ +M+
Sbjct: 142 PYSE-----LLLENPNPEY--AVLETSCFQLETIEQY-HPEVSVFLNFTEDHLDRYTSME 193
Query: 141 NYALTKCHLFSHMVNTKLGLLPFGNQ---HLNEAIKGHRFNLAWIGAFPGVKIDTEAKTA 197
+Y K +F + + +L + ++ +L++ IK + + + + K
Sbjct: 194 DYLKAKKRIFINQTESDFAILNYDDEVVKNLSKEIKPQVYYFSLKESIESGAFLKDNKIY 253
Query: 198 SFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPH 257
E ++ + ++G HN N + L + + GV VE + I + PH
Sbjct: 254 FREDKFSKPKEIIEKEEIPLLGLHNVQNTLASILCSIVM--GVPVEVIRDGIRTFKGLPH 311
Query: 258 RMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
R++ V R++ GV +++DSK+T ++T L K +++ GG +K
Sbjct: 312 RLEFV-REVNGVIFINDSKSTTPDSTIKALESF-NQKVILIAGGSSK 356
>gi|86160187|ref|YP_466972.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Anaeromyxobacter
dehalogenans 2CP-C]
gi|118595640|sp|Q2IG29.1|MURD_ANADE RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|85776698|gb|ABC83535.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Anaeromyxobacter
dehalogenans 2CP-C]
Length = 462
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 148/298 (49%), Gaps = 29/298 (9%)
Query: 22 LQSGKR----VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQML-NHLGIEAFVGG 76
+Q+ +R V E++ AA+ + + I+ +TGTNGKST G +L H FVGG
Sbjct: 87 IQAARRRGVPVWGEVELAARFL-GGLPIVGITGTNGKSTTTALTGALLARHR--RTFVGG 143
Query: 77 NLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERH 136
NLG PLSE S +P AVVE+SS+Q+E + F V+ VLN+TPDHL+R+
Sbjct: 144 NLGTPLSELVL------SGEPA-AAAVVELSSFQLEGIER-FRARVAAVLNVTPDHLDRY 195
Query: 137 KTMKNYALTKCHLFSHMVNTKLGLLPFGNQH---LNEAIKGHRFNLAWIGAFPGVKID-- 191
+ YA K LF+ + + + + A +G + P D
Sbjct: 196 PDVDAYAAAKARLFATQEPDDVAVANARDPRALAMAGASRGDLHTFGFGAPVPASARDEG 255
Query: 192 ---TEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNST 248
TA + P + QLHN + GRHN NA A L +GV EA+ +
Sbjct: 256 GEPGPGGTAIWYTPRGRAPERYQLHNRALRGRHNRENAMAAVLCA--RLMGVPGEAVQAG 313
Query: 249 IEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLK--GHKCVILLGGQAK 304
++ HR+++V + +GV WV+DSKATN+++T GL + V+++GG+ K
Sbjct: 314 LDAFPGLHHRLELVA-EGRGVEWVNDSKATNVDSTFVGLAAFPAGAPRVVLIMGGRGK 370
>gi|218961097|ref|YP_001740872.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase
(UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase)
(D-glutamic acid adding enzyme) [Candidatus Cloacamonas
acidaminovorans]
gi|167729754|emb|CAO80666.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase
(UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase)
(D-glutamic acid adding enzyme) [Candidatus Cloacamonas
acidaminovorans str. Evry]
Length = 472
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 156/291 (53%), Gaps = 25/291 (8%)
Query: 21 LLQSGKR----VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGG 76
+LQ K ++SE++ ++ + KI+AVTG+NGKST V+ + +L LG ++ + G
Sbjct: 103 ILQKAKEKNIELISEIELGYRIKAKDSKIIAVTGSNGKSTTVSLIHHILTGLGKKSLLAG 162
Query: 77 NLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERH 136
N+G+ AF + KP + V+E+SS+Q+++ N F P V+V+LN+TPDH++R+
Sbjct: 163 NIGD-----AFCSYDI--EKPGWDYIVLEISSFQLDLINS-FQPDVAVLLNITPDHIDRY 214
Query: 137 KTMKNYALTKCHLFSHMVNTKLGLLPFGN---QHLNEAIKGHRFNLAWIGAFPGVKIDTE 193
+ ++YAL+K ++F + T +L + + +H + IK + + P D
Sbjct: 215 NSFEDYALSKVNIFKNQEMTDTAVLFWDSPEVKHFTKDIKARKL---YFSLSPN---DNA 268
Query: 194 AKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILR 253
+ G +++ L + G HNY NA A L+V L + + ++ +
Sbjct: 269 FAYLANNYIQFGSETKVPLSYFAIKGPHNYANAMSAMLAVYAL--IPEPTKIAEAVKGFK 326
Query: 254 TPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
+ PHR++ V I+GV++ +DSKATN ++ + L + I++GG K
Sbjct: 327 SLPHRLEYVDT-IKGVSFYNDSKATNTDSVRSALNSFE-QPIRIIMGGSDK 375
>gi|302036130|ref|YP_003796452.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Candidatus
Nitrospira defluvii]
gi|300604194|emb|CBK40526.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Candidatus
Nitrospira defluvii]
Length = 462
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 91/272 (33%), Positives = 145/272 (53%), Gaps = 18/272 (6%)
Query: 25 GKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSE 84
G RV+ EL+ A++ + + ++AVTGTNGKST VT +G+ L G AFVGGNLG SE
Sbjct: 92 GVRVIGELELASRFL--TAPVVAVTGTNGKSTTVTLIGKFLQESGKRAFVGGNLGIAASE 149
Query: 85 AAFHCI-ALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYA 143
AA + A S ++ V+EVSS+Q+E + F P ++ +LN+T DH++R+ ++++Y
Sbjct: 150 AALTSVQAKAGSAAPYEYVVLEVSSFQLETTEQ-FHPWIAAILNVTLDHMDRYASVEDYV 208
Query: 144 LTKCHLFSHMVNTKLGLLPFGNQH---LNEAIKGHRFNLAWIGA-FPGVKIDTEAKTASF 199
K +F++ L + L KG + GA GV T
Sbjct: 209 AAKATIFANQTAGDYSLFNLDDARVAALRGRTKGTVLGFSRSGATVSGVAGATVLDGDLI 268
Query: 200 EVPAVGVVSQL-QLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPP-- 256
G ++ + +M+++G HN N V A GL G +EA+ + +LR+ P
Sbjct: 269 VTTVRGRREEICRRSDMRLIGLHNVEN--VMAAVTYGLLCGCSIEAVRA---VLRSFPGL 323
Query: 257 -HRMQIVHRDIQGVTWVDDSKATNLEATCTGL 287
H +++V R+ +GV +V+DSK TN++A L
Sbjct: 324 EHALEVV-RERRGVRFVNDSKGTNVDAVLKAL 354
>gi|229496695|ref|ZP_04390409.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Porphyromonas
endodontalis ATCC 35406]
gi|229316592|gb|EEN82511.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Porphyromonas
endodontalis ATCC 35406]
Length = 452
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 157/296 (53%), Gaps = 19/296 (6%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
++ G V+SE++FA++ +P K+ A+TG+NGK+T V +V +L G +A + GN+G
Sbjct: 82 FIKRGISVISEIEFASRYLPEDTKVAAITGSNGKTTTVNWVTHILKTAGYDAAMCGNVG- 140
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK-TM 139
F L + P + VVE+SS+Q++ K F P VSV+LN+TPDHL+R+K
Sbjct: 141 ------FSMARLVAEDPH-KYYVVEMSSFQLDGTYK-FHPNVSVLLNITPDHLDRYKHKF 192
Query: 140 KNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFN---LAWIGAFPGVKIDTEAKT 196
+ YAL+K + + + + + + ++ H L + G K E+
Sbjct: 193 ELYALSKMRITQQLGKGDSFVYWEEDAFIKKYLEQHSMECTLLPFSLQTSGAKALYESDK 252
Query: 197 ASFEVPAVGVVSQLQL--HNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRT 254
+ + A +S + ++ ++G+HN NA +AL + + GV E L + +
Sbjct: 253 ETLHIEAQHNLSAFSIPKRDLALVGKHNLLNAMASAL--VAREFGVSNEYLGKALRDFKN 310
Query: 255 PPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQE 310
PHR++ V +I GV +++DSKATN+++T L + + V++LGG K N E
Sbjct: 311 VPHRIEYV-AEIDGVRYINDSKATNIQSTFYAL-EAQTTPVVLILGGTDKGNNYSE 364
>gi|333896893|ref|YP_004470767.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase
[Thermoanaerobacterium xylanolyticum LX-11]
gi|333112158|gb|AEF17095.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase
[Thermoanaerobacterium xylanolyticum LX-11]
Length = 454
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 155/287 (54%), Gaps = 15/287 (5%)
Query: 25 GKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSE 84
G V+ E++FA ++ I A+TGTNGK+T + +G++ G++ +V GN+G PL E
Sbjct: 92 GIDVIGEVEFAYRL--SKAPIYAITGTNGKTTTTSLLGEIFKASGVKTYVAGNIGYPLVE 149
Query: 85 AAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYAL 144
AA + A V V E+SS+Q+E K F P +S ++N+TPDHL RHKT++NY
Sbjct: 150 AAINANAE-------DVIVAEISSFQLETI-KEFKPVISAIINITPDHLNRHKTLENYIE 201
Query: 145 TKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAV 204
K +F + + +L + +++++ K + N+ ++ T + + A
Sbjct: 202 IKGRIFENQTADQFTVLNYDDKNISSLFKKAKCNVFPFSRNRALEYGTYLENGKIIISAN 261
Query: 205 GVVSQ-LQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVH 263
G S + + ++ + G HN NA VA S + G+D++ ++ T+ + HR++ V
Sbjct: 262 GEKSTIIDIEDIYIPGNHNVENAMVA--STMAYLAGIDIKVISETLRTFKGVEHRIEFV- 318
Query: 264 RDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQE 310
R++ GV + +DSK TN +A + +KG +++ GG K ++ E
Sbjct: 319 RNVNGVKYYNDSKGTNPDAAIKAIEAMKG-PIILIAGGYDKGVSFDE 364
>gi|197124214|ref|YP_002136165.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Anaeromyxobacter
sp. K]
gi|196174063|gb|ACG75036.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Anaeromyxobacter
sp. K]
Length = 462
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/297 (32%), Positives = 146/297 (49%), Gaps = 27/297 (9%)
Query: 22 LQSGKR----VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGN 77
+Q+ +R V E++ AA+ + + I+ +TGTNGKST G +L FVGGN
Sbjct: 87 IQAARRRGVAVWGEVELAARFL-DGLPIVGITGTNGKSTTTALTGALLAR-DRRTFVGGN 144
Query: 78 LGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK 137
LG PLSE S +P AVVE+SS+Q+E ++ V+ VLN+TPDHL+R+
Sbjct: 145 LGTPLSELVL------SGEPA-DAAVVELSSFQLEGIERFRA-RVAAVLNVTPDHLDRYP 196
Query: 138 TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIG---AFPGVKIDTEA 194
+ YA K LF+ + + + R +L G P D
Sbjct: 197 DVDAYAAAKARLFATQQPDDVAVANARDPRALAMAGASRADLHTFGFGAPAPASARDEGG 256
Query: 195 K-----TASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTI 249
+ TA + P + QL N + GRHN NA A L +GV EA+ + +
Sbjct: 257 EPGPEGTAIWFTPRGRAPERYQLRNRALRGRHNRENAMAAVLCA--RLMGVPGEAVQAGL 314
Query: 250 EILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLK--GHKCVILLGGQAK 304
+ HR+++V + +GV WV+DSKATN+++T GL + V+++GG+ K
Sbjct: 315 DAFPGLHHRLELVA-EGRGVEWVNDSKATNVDSTFVGLAAFPSGAPRVVLIMGGRGK 370
>gi|220918994|ref|YP_002494298.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Anaeromyxobacter
dehalogenans 2CP-1]
gi|219956848|gb|ACL67232.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Anaeromyxobacter
dehalogenans 2CP-1]
Length = 462
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 95/292 (32%), Positives = 143/292 (48%), Gaps = 23/292 (7%)
Query: 23 QSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPL 82
+ G V E++ AA+ + + I+ +TGTNGKST G +L FVGGNLG PL
Sbjct: 92 RRGVAVWGEVELAARFL-GGLPIVGITGTNGKSTTTALTGALLAR-DRRTFVGGNLGTPL 149
Query: 83 SEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNY 142
SE S +P AVVE+SS+Q+E ++ V+ VLN+TPDHL+R+ + Y
Sbjct: 150 SELVL------SGEPA-DAAVVELSSFQLEGIERFRA-RVAAVLNVTPDHLDRYPDVDAY 201
Query: 143 ALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIG---AFPGVKIDTEAK---- 195
A K LF+ + + + R +L G P D +
Sbjct: 202 AAAKARLFATQQPDDVAVANARDPRALAMAGASRADLHTFGFGAPTPASARDEGGEPGPE 261
Query: 196 -TASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRT 254
TA + P + QL N + GRHN NA A L +GV EA+ + ++
Sbjct: 262 GTAIWFTPRGRAPERYQLRNRALRGRHNRENAMAAVLCA--RLMGVPGEAVQAGLDAFPG 319
Query: 255 PPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLK--GHKCVILLGGQAK 304
HR+++V + +GV WV+DSKATN+++T GL + V+++GG+ K
Sbjct: 320 LHHRLELVA-EGRGVEWVNDSKATNVDSTFVGLAAFPSGAPRVVLIMGGRGK 370
>gi|373488415|ref|ZP_09579080.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Holophaga foetida
DSM 6591]
gi|372006740|gb|EHP07372.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Holophaga foetida
DSM 6591]
Length = 443
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 103/298 (34%), Positives = 145/298 (48%), Gaps = 41/298 (13%)
Query: 22 LQSGKRVMSELDFAAQVI----PRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGN 77
L G V+ EL+FA +V+ P ++ ILAVTGTNGKST + +L + A GN
Sbjct: 84 LGRGIPVLGELEFAHRVLRTQDPDAV-ILAVTGTNGKSTTTDLLAHLLRAADLPAVACGN 142
Query: 78 LGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK 137
LG PL +A L ++P + A+ E SSYQ+E + F +V+LNLTPDHL RH
Sbjct: 143 LGTPLMDA------LKGAQPGTRYAL-ECSSYQLET-VREFHAQGAVLLNLTPDHLARHG 194
Query: 138 TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNL---------AWIGAFPGV 188
+M+ Y K +F L L+P G N G R + AW AF +
Sbjct: 195 SMEGYLAAKLRVFERQEEGDLALMPMGATFENPG-HGRRADFGWSEPEGPGAWCDAFGML 253
Query: 189 KIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNA-AVAALSVLGLDIGVDVEALNS 247
+ T+A+ L +K+ G HN NA A AL+ G G D +L
Sbjct: 254 WLRTDAQAQEL----------LHRSELKIPGDHNVENALAAIALASHG---GADPGSLRQ 300
Query: 248 TIEILRTPPHRMQIV-HRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
+ HR+ RD GV++ +DSK TN++AT T + L G V++LGG+ K
Sbjct: 301 GLRSYPGLAHRIAFCGERD--GVSFYNDSKGTNVDATLTAIKALSG-PLVLMLGGEDK 355
>gi|406891892|gb|EKD37389.1| hypothetical protein ACD_75C01145G0001, partial [uncultured
bacterium]
Length = 413
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/295 (31%), Positives = 148/295 (50%), Gaps = 26/295 (8%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
L +G + EL AA +I ++ ++AVTGTNGK+TV T +G++L G + FVGGN+G
Sbjct: 95 LRSAGLPLAGELGVAAGLI--TVPVVAVTGTNGKTTVTTLIGELLRGSGRKPFVGGNIGT 152
Query: 81 PLSEAAFHCIALPSSKP-KFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTM 139
P+ E + C +P ++ V VVEVSS+Q+E F P V V+LN+TPDHL+RH ++
Sbjct: 153 PVYE--YLC------RPAEYDVVVVEVSSFQLESAGT-FAPQVGVLLNITPDHLDRHGSL 203
Query: 140 KNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGA----FPGVKIDTEAK 195
+NYA K LF H + ++ ++ + G + G K K
Sbjct: 204 ENYARVKMQLFKHQKPGDVAIINGDDRLCRKLPDGAAAEVRSFGCNAHNIKSTKSTKNTK 263
Query: 196 TASFEVPAV------GVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTI 249
A+ V G V + L + N A A L+ +G E + + +
Sbjct: 264 NAAVLVDDKICLTTHGEVEEYSLAGTSLGNSVGMQNGAAAILAA--RALGCTREQIMAGL 321
Query: 250 EILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
+ R PHR++ V ++ GV++ +DSKATN A L G+ +++ GG+ K
Sbjct: 322 KAFRLAPHRIEFVA-EVDGVSYYNDSKATNTGAVIAALRQFPGN-VILIAGGRDK 374
>gi|390934668|ref|YP_006392173.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase
[Thermoanaerobacterium saccharolyticum JW/SL-YS485]
gi|389570169|gb|AFK86574.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase
[Thermoanaerobacterium saccharolyticum JW/SL-YS485]
Length = 454
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 153/287 (53%), Gaps = 15/287 (5%)
Query: 25 GKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSE 84
G V+ E++FA ++ I A+TGTNGK+T + +G++ G + +V GN+G PL E
Sbjct: 92 GIDVIGEVEFAYRL--SKAPIYAITGTNGKTTTTSLLGEIFKASGAKTYVAGNIGYPLVE 149
Query: 85 AAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYAL 144
AA + A V V E+SS+Q+E K F P +S ++N+TPDHL RHKT++NY
Sbjct: 150 AAINANAE-------DVIVAEISSFQLETI-KEFKPEISAIINITPDHLNRHKTLENYIE 201
Query: 145 TKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAV 204
K +F + + + +L + +++++ K + N+ ++ T + + A
Sbjct: 202 IKGRIFENQTSDQFTVLNYDDKNISSLFKKAKCNVFPFSRNRVLEYGTYLENGKIIISAD 261
Query: 205 GVVSQ-LQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVH 263
G + + ++ + G HN NA VAA + G+D++ +N T+ + HR++ V
Sbjct: 262 GEKKTIIDVEDIYIPGNHNVENAMVAA--TMAYLAGIDIKVINETLRTFKGVEHRIEFV- 318
Query: 264 RDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQE 310
R I GV + +DSK TN +A + +KG +++ GG K ++ E
Sbjct: 319 RTINGVKYYNDSKGTNPDAAIKAIEAMKG-PIILIAGGYDKGVSFDE 364
>gi|158522799|ref|YP_001530669.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Desulfococcus
oleovorans Hxd3]
gi|226711907|sp|A8ZXW5.1|MURD_DESOH RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|158511625|gb|ABW68592.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Desulfococcus
oleovorans Hxd3]
Length = 459
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/289 (33%), Positives = 147/289 (50%), Gaps = 27/289 (9%)
Query: 23 QSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPL 82
+ G VM E++ AA+ + + + AVTGTNGK+TV T +G ML G + FVGGN+G PL
Sbjct: 93 EKGIPVMGEMELAARFVTKPVA--AVTGTNGKTTVTTLLGDMLKASGRQVFVGGNIGAPL 150
Query: 83 SEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNY 142
I +AVVEVSS+Q++ ++ F P V+V+LN+ DHL R+ Y
Sbjct: 151 -------IGFADKGENADMAVVEVSSFQLDT-SETFRPHVAVLLNIAEDHLARYVDFNAY 202
Query: 143 ALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHR-----FNLAWIGAFPGVKIDT--EAK 195
+K +F + + ++ + H+ +A KG R FN V DT E
Sbjct: 203 VRSKGRIFENQEADDVAVINGADFHVLQASKGIRSRKLTFNAGKNTQDGAVIGDTAVEIV 262
Query: 196 TASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTP 255
TA + + V S L + RHN N +AA ++ L +G VE + + ++ +
Sbjct: 263 TAGTKTATISVTSPL------MRARHNMEN--IAAATLAALAMGATVEGIQAAVDGFQGL 314
Query: 256 PHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
HR++ V I V + DDSKATN +A L + + V+LLGG+ K
Sbjct: 315 RHRLEYVA-SIDDVHYFDDSKATNPDAVRRAL-EFFTSRVVLLLGGEDK 361
>gi|365174756|ref|ZP_09362195.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Synergistes sp.
3_1_syn1]
gi|363614168|gb|EHL65666.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Synergistes sp.
3_1_syn1]
Length = 460
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 102/306 (33%), Positives = 151/306 (49%), Gaps = 40/306 (13%)
Query: 14 KATGLACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAF 73
KA L G V ELDF + + S ++ VTG+NGK+T + +G L LG
Sbjct: 83 KAPILEAAAAKGITVTGELDFVSPYL--SGIVIGVTGSNGKTTTTSMIGYYLERLGYSVM 140
Query: 74 VGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHL 133
GGN+GN ++ AA ++ V+E+SS+Q+ K+ C ++VV NL PDH+
Sbjct: 141 TGGNIGNAVARAA---------GKEYDFIVLELSSFQLCWAKKFIC-DLAVVTNLAPDHI 190
Query: 134 ERHKTMKNYALTKCHLFSHMVNTKLGLLPFG--------NQHLNEAIKGH--RFNLAWIG 183
+ H + +NY K +L VN L P G + LN A + R+ L W
Sbjct: 191 DWHGSYENYVAAKANL----VNC---LAPGGAVIYQERDEEALNIAAREEIVRYPLRWGE 243
Query: 184 AFP---GVKIDTEAKTASFEVPAVGVVSQL-QLHNMKVMGRHNYHNAAVAALSVLGLDIG 239
P G+ +D + + + +L ++K++GRHN N A+ AL VL L
Sbjct: 244 DDPHKRGLYLDDGVRASWINGGGCRMKRRLFFFDDVKLLGRHNLENTAM-ALGVLAL--- 299
Query: 240 VDVEALNSTIEILRTPP-HRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVIL 298
++ L+ + PP HR + +GVT+VDDSK TN+ AT T + L G K VI+
Sbjct: 300 FNMPELSPELIASYVPPKHRCAFAGK-TRGVTFVDDSKGTNVAATVTAMTSLPGAK-VII 357
Query: 299 LGGQAK 304
LGGQ K
Sbjct: 358 LGGQGK 363
>gi|312880220|ref|ZP_07740020.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Aminomonas
paucivorans DSM 12260]
gi|310783511|gb|EFQ23909.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Aminomonas
paucivorans DSM 12260]
Length = 462
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 105/335 (31%), Positives = 157/335 (46%), Gaps = 55/335 (16%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L G VM ELDF + + S+ L VTG+NGK+T + +G +L G+ V GN+GNP
Sbjct: 90 LSQGVEVMGELDFVSPFLRGSL--LGVTGSNGKTTTTSLIGHLLREEGVRVSVAGNIGNP 147
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
L+ A + + + V E+SS+Q+ + C +++VV NL PDH++ H + +
Sbjct: 148 LASAV---------REEAEWVVAELSSFQLHWARRLRC-SLAVVTNLAPDHIDWHGSYEA 197
Query: 142 YALTKCHLFSHMVNT---------KLGLLPFGNQHLNEAIKGHRFNLAWI----GAFPGV 188
Y K +L + T +L LLP +Q + L+W G GV
Sbjct: 198 YVDAKANLVRALDPTTGMAIVQRSELPLLPPVSQTI---------PLSWTEDGEGEEGGV 248
Query: 189 KIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNST 248
+ + A P +G + ++G HN NAA+AA + L + + +
Sbjct: 249 TLIRSRREALLSFPGLGKRRLFSFDALSLLGDHNLENAAMAATATT-LVLKDAPKHVEEA 307
Query: 249 IEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK---- 304
+ PPHR Q+V R++ V +VDDSK TN+ AT T L L G K VILLGGQ K
Sbjct: 308 LTRFVAPPHRCQLV-RELGKVRFVDDSKGTNVAATMTALTSLPGTK-VILLGGQGKGESY 365
Query: 305 --------------VLNGQESNGFEKLIEPLNHHR 325
VL G+E K ++ +HR
Sbjct: 366 GSLAKAVTEWARFAVLFGEEGERIGKALDDAGYHR 400
>gi|344923347|ref|ZP_08776808.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Candidatus
Odyssella thessalonicensis L13]
Length = 448
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 96/309 (31%), Positives = 156/309 (50%), Gaps = 45/309 (14%)
Query: 25 GKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSE 84
G ++M ++D Q P + KI+ VTGTNGKST T +G +L + + VGGN+G P+
Sbjct: 81 GIKIMGDVDLFRQNYP-TAKIIGVTGTNGKSTTTTLIGHILKNCNVPIAVGGNVGIPV-- 137
Query: 85 AAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVV--LNLTPDHLERHKTMKNY 142
++LP P V V+E+SSYQ+E+ C +++V N+TPDHLERHKTM++Y
Sbjct: 138 -----MSLP-KLPDNGVYVIELSSYQLELST---CLGLTIVAWTNITPDHLERHKTMRDY 188
Query: 143 ALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASF--- 199
K +F+ ++ + + + +R N A G F V + + F
Sbjct: 189 VYAKSQIFASPTVPPQSIICVDDSYSKDLY--NRMNAAHPGYFTPVSVVNPLRRGVFVYD 246
Query: 200 ---------EVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIE 250
E +G ++QL+ + G HNY N A+A + +G++ + + + I+
Sbjct: 247 GMLIDALAEERINLGEITQLKY----LKGPHNYQNIAIA--YGVSRKLGLNSDEIMAAIQ 300
Query: 251 ILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVI-LLGGQAKVLNGQ 309
HR + V GV +++DSKATN EA LK ++ + +LGG AK
Sbjct: 301 TFPGLAHRQEYVETR-NGVIFINDSKATNAEAASHA---LKAYENIYWILGGVAK----- 351
Query: 310 ESNGFEKLI 318
S+G ++L+
Sbjct: 352 -SDGIDELL 359
>gi|153006720|ref|YP_001381045.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Anaeromyxobacter
sp. Fw109-5]
gi|152030293|gb|ABS28061.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Anaeromyxobacter
sp. Fw109-5]
Length = 461
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 140/292 (47%), Gaps = 25/292 (8%)
Query: 24 SGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLS 83
+G V E++ AA+ + + I+A+TGTNGKST G + F GGNLG PL
Sbjct: 93 AGVPVWGEVELAARFLA-GVPIVAITGTNGKSTTTALAGALFARH-RRTFTGGNLGTPLC 150
Query: 84 EAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYA 143
+ H + +V V E+SS+QME P V+ +LN+TPDHL+R++ + +YA
Sbjct: 151 Q---HVL----DGGGAEVVVAELSSFQMEG-LLSLRPRVAAILNVTPDHLDRYRDVDDYA 202
Query: 144 LTKCHLF------SHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAF---PGVKIDTEA 194
K LF H V + A+ H F G PG++ D
Sbjct: 203 AAKARLFGLQQPGDHAVANARDPRALAMAEASRAVL-HTFGFGPPGPGARDPGLEPDEGG 261
Query: 195 KTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRT 254
T + G + +L N + GRHN NA A L L GV + + ++
Sbjct: 262 ATELWVQARGGGPERFRLANRALRGRHNRENAMAAVLCARLL--GVPGGEVQAGLDAFGG 319
Query: 255 PPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKG--HKCVILLGGQAK 304
PHR+++V + G+ WV+DSKATN+++T GL + V+++GG+ K
Sbjct: 320 LPHRLEVVG-ERGGIEWVNDSKATNVDSTLVGLSAFPAGTARVVLVMGGRGK 370
>gi|239617755|ref|YP_002941077.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Kosmotoga olearia
TBF 19.5.1]
gi|239506586|gb|ACR80073.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Kosmotoga olearia
TBF 19.5.1]
Length = 449
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 99/300 (33%), Positives = 149/300 (49%), Gaps = 47/300 (15%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIK--ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNL 78
+L SGK +EL+FA + + I+ +TGTNGKSTV T VG + G++ F+GGNL
Sbjct: 84 ILSSGKPFTTELEFALDKLKKLEHGVIVGITGTNGKSTVTTMVGHIAKKSGLKTFIGGNL 143
Query: 79 GNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQME---IPNKYFCPTVSVVLNLTPDHLER 135
G PL + S +F V VVEVSS+Q+ KYF +S +LN+ DHL+
Sbjct: 144 GTPL---------ISSINERFDVYVVEVSSFQLTWFGKKEKYFH--LSSILNIAQDHLDY 192
Query: 136 HKTMKNYALTKCHLF-----SHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKI 190
H+ M+ YAL K + S ++N+++ L FG+ +++ K I F
Sbjct: 193 HRDMREYALAKLKIIELTSGSSIINSEI-LENFGDLLVDKTKK-------QIIPFS---- 240
Query: 191 DTEAKTASFEVPAVGVVS----QLQLHNMKVMGRHNYHNAAVAALSVLGLD--IGVDVEA 244
+ SF G++ + L ++ G HN NAA+ LGL +G+ V
Sbjct: 241 ---TRKDSFFCLKDGIMRLHKLSISLDSLNFPGIHNQENAAIT----LGLAQFLGIHVHD 293
Query: 245 LNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
++ HRMQ + I GVT+++DSKATN A L + K +I+L G+ K
Sbjct: 294 ALEKLQDYAFLDHRMQKCGQ-INGVTFINDSKATNAHAVINALENFDLEKVIIILSGKEK 352
>gi|291459276|ref|ZP_06598666.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Oribacterium
sp. oral taxon 078 str. F0262]
gi|291418530|gb|EFE92249.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Oribacterium
sp. oral taxon 078 str. F0262]
Length = 452
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 136/278 (48%), Gaps = 19/278 (6%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
+ EL+ A Q K+ A+TGTNGK+T V+ VG++L + V GN+GNP + A
Sbjct: 94 IWGELELAYQ--SSRGKLAAITGTNGKTTTVSLVGEILRSHFSDTHVVGNIGNPFTAEAL 151
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
V+EVSS+Q+E F P VS + N+TPDHL+RHK+MKNY K
Sbjct: 152 ET-------EDSSATVIEVSSFQLETIMD-FRPDVSAITNITPDHLDRHKSMKNYIRIKE 203
Query: 148 HLFSHMVNTKLGLLPFGNQHLNEAIKGHRF--NLAWIGAFPGVKIDTEAKTASFEVPAVG 205
+ + +L + L KG + W + +K + + G
Sbjct: 204 SIAMNQTEEDCVVLNHEDPELRSFGKGKELKPKVLWFSSERELKEGFFLRKDALFFREAG 263
Query: 206 VVSQ--LQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVH 263
++ L++ +K++G+HNY N A + +GV + + S + R HR++ V
Sbjct: 264 KEAEELLKVRELKLLGKHNYENVMCAM--AVSYRMGVPMRKIISVCKSFRPVEHRIEFV- 320
Query: 264 RDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGG 301
R GV++ +DSK TN++A L + G VIL+GG
Sbjct: 321 RKRSGVSYYNDSKGTNVDAAIQALRAMPGP--VILIGG 356
>gi|304439979|ref|ZP_07399872.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Peptoniphilus
duerdenii ATCC BAA-1640]
gi|304371471|gb|EFM25084.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Peptoniphilus
duerdenii ATCC BAA-1640]
Length = 431
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/326 (28%), Positives = 168/326 (51%), Gaps = 43/326 (13%)
Query: 9 LEFQLKATGLA-------CLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFV 61
++F +K+ G+ L +++S+++FA+ ++ I+A+TGTNGK+T+ T V
Sbjct: 51 IDFAVKSPGIKPESKIIKTLEDKNIKIISDIEFASYFY-KTKDIVAITGTNGKTTITTLV 109
Query: 62 GQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPT 121
++LN +G +++ GN+G + + PKF V E SS+Q+ +K F P
Sbjct: 110 NEILNKVG-KSYAVGNIG-------VGVMDVIDYDPKF--IVCEASSFQLAYIDK-FHPH 158
Query: 122 VSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFGNQH---LNEAIKGHRF- 177
V+V+ N+T DHL+ HKT++NY K +++ ++ +L + +N +K +
Sbjct: 159 VAVITNITSDHLDWHKTVENYRKAKENIYKNLEEDDFLILGASCDYVKTINAGVKNTFYY 218
Query: 178 ---NLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVL 234
+L G F D E F+ + +++ ++ + GRHN NA A LS
Sbjct: 219 SYDDLGRPGLFTK---DEEIIFRHFDGTLENI---MKVSDVFIKGRHNIENAMAAILSAY 272
Query: 235 GLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHK 294
L GVD+E + TI+ + HR++ V R G+++ +DSK TN ++T L + K
Sbjct: 273 SL--GVDLEIIVDTIKNFKGVEHRIEFV-RTFNGISYYNDSKGTNPDSTDVALKAFE--K 327
Query: 295 CVILLGGQAKVLNGQESNGFEKLIEP 320
V+++GG K + F+KL+E
Sbjct: 328 SVLIIGGYDK------GSDFKKLLED 347
>gi|406940525|gb|EKD73259.1| hypothetical protein ACD_45C00383G0008 [uncultured bacterium]
Length = 445
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/301 (31%), Positives = 154/301 (51%), Gaps = 32/301 (10%)
Query: 13 LKATGLACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEA 72
L+ ++ + G ++ +++ A+ + + I+A+TGTN KSTV T VG+M GI+
Sbjct: 77 LQEPAMSQQMARGVPIIGDIELFAKAV--NSPIIAITGTNAKSTVTTLVGEMAIASGIKT 134
Query: 73 FVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDH 132
VGGNLG P A + PS ++ V+E+SS+Q+E P V+ VLN+TPDH
Sbjct: 135 QVGGNLGVP----ALDLLTTPSP----ELFVLELSSFQLET-TYSLAPIVATVLNVTPDH 185
Query: 133 LERHKTMKNYALTKCHLFSH----MVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGA--FP 186
++R+ T K+Y + K ++SH + N PF F L G F
Sbjct: 186 MDRYATFKDYCMAKQRVYSHCEVAVCNRD---DPFTEYVTTPTQHKIYFTLQQPGVDEFG 242
Query: 187 GVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALN 246
+K + E+ A FE + + + + ++GRH Y A+AAL++ G G+ + ++
Sbjct: 243 LLKKNNESFLA-FENQTL-----MPVRELPILGRH-YQANALAALAI-GYGYGLSMSSML 294
Query: 247 STIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGH---KCVILLGGQA 303
+ + PHR Q+V R++ GV W +DSK TN+ AT + L K +++ GG
Sbjct: 295 QVLMQFKGLPHRCQLV-RELNGVRWYNDSKGTNVGATLAAIAGLGSEMAGKLILIAGGVG 353
Query: 304 K 304
K
Sbjct: 354 K 354
>gi|390959238|ref|YP_006422995.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Terriglobus roseus
DSM 18391]
gi|390414156|gb|AFL89660.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Terriglobus roseus
DSM 18391]
Length = 450
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/271 (32%), Positives = 138/271 (50%), Gaps = 29/271 (10%)
Query: 44 KILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAV 103
+++A+TG+NGK+T + VG +L H G+E VGGN+G P+ E L + +V
Sbjct: 109 RVVAITGSNGKTTTTSLVGHILEHAGLETKVGGNIGLPVVE-------LVEGSTEKTWSV 161
Query: 104 VEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPF 163
+EVSS+Q+E + F P ++ VLN+TPDHL+RH + +NYA K + + +L
Sbjct: 162 LEVSSFQLET-IETFRPHIAAVLNITPDHLDRHGSFENYAAAKARITENQTAEDFLVLNA 220
Query: 164 GNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVV----------SQLQLH 213
++ + + W F GV+ K +F V A GV + +
Sbjct: 221 EDKPTQMVAAKTKPQIYW---FSGVR---RVKQGAF-VHADGVYFLAKEGGTPEPVMPVA 273
Query: 214 NMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVD 273
+ + G HN N +AA+++ L GV E + + HR+Q V R ++GV + +
Sbjct: 274 EIPLPGAHNVEN-VLAAIAMARL-AGVSAEVVREAVGTFTAVEHRLQFV-RSVRGVDYYN 330
Query: 274 DSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
DSKATN++AT L G VI LGG+ K
Sbjct: 331 DSKATNVDATAKALASFAGGVRVI-LGGKDK 360
>gi|442323132|ref|YP_007363153.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Myxococcus
stipitatus DSM 14675]
gi|441490774|gb|AGC47469.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Myxococcus
stipitatus DSM 14675]
Length = 455
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/292 (30%), Positives = 141/292 (48%), Gaps = 30/292 (10%)
Query: 24 SGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLS 83
+G + E++ A++ + S+ + +TGTNGKST G++ G FVGGNLG P S
Sbjct: 93 AGVPIWGEVELASRFL-ESVPLFGITGTNGKSTTTALTGELFAKSGRRTFVGGNLGRPFS 151
Query: 84 EAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYA 143
EAA S + VVE+SS+Q+E + P +V+LNLTPDHL+R+ + Y
Sbjct: 152 EAAM-------SPGDWDALVVELSSFQLE-GIQTLRPRGAVILNLTPDHLDRYASHSTYG 203
Query: 144 LTKCHLFSHMVNTKLGLLPFGNQH---LNEAIKGHRFNLAWIG-------AFPGVKIDTE 193
K +F H ++ + L K + + G G+ +
Sbjct: 204 EAKARIFHHQRAGDFAVVNADDAEVMGLARQAKVPVYGFSVTGKPVVDAPVLAGLAV--- 260
Query: 194 AKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAA-LSVLGLDIGVDVEALNSTIEIL 252
A+ F + G +L+N + G HN NA A L+ LG GV +A+ + ++
Sbjct: 261 AEEGGFRLDFQG--EHYRLNNRALRGAHNAQNAMAATLLARLG---GVSADAVQAGLDSY 315
Query: 253 RTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
PHR++ V R + GV WV+DSKATN+++ L + +I GG+ K
Sbjct: 316 PGLPHRLESV-RVLDGVEWVNDSKATNVDSVLVALRAFRSGLWLI-AGGKGK 365
>gi|33861920|ref|NP_893481.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
[Prochlorococcus marinus subsp. pastoris str. CCMP1986]
gi|60390532|sp|Q7V0A5.1|MURD_PROMP RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|33640288|emb|CAE19823.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Prochlorococcus
marinus subsp. pastoris str. CCMP1986]
Length = 473
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 144/291 (49%), Gaps = 26/291 (8%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
L + G V+ E++ A + + ++I + +TGTNGK+TV + +L + A GN+G
Sbjct: 99 LKERGIVVIGEINIAWESL-KNINWIGITGTNGKTTVTHLLSHILRENNLFAPFAGNIGT 157
Query: 81 PLSEAAFHCIALPSSKPK-FQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTM 139
PL E A+ S+K K V E+SS+Q+EI P + + TPDHL+RHKT+
Sbjct: 158 PLCEIAY------STKSKNIDWIVAELSSFQIEIATHCIKPKIGIWTTFTPDHLDRHKTL 211
Query: 140 KNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASF 199
NY K L ++ + + +Q+L E K N WI P V +++ +
Sbjct: 212 DNYFKIKNSLLKQ---SEFRIYNYDDQYLKENFKS-LLNGIWITTNPNV---SDSDHCDY 264
Query: 200 EVPAVGVVSQ-----LQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRT 254
+ + + L L N K+ G HN N +A + IG+ E + + +
Sbjct: 265 WINNENFIVERREKLLSLKNFKLKGNHNTQNLLLAVAA--ARKIGLSTERIKNALLSYEQ 322
Query: 255 PPHRMQ-IVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
PHRM+ I RD + ++DSKATN +++ G+ +KG +I+ GG+ K
Sbjct: 323 LPHRMETIFQRDELEI--INDSKATNFDSSVAGINAIKGSP-IIISGGRLK 370
>gi|304317204|ref|YP_003852349.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase
[Thermoanaerobacterium thermosaccharolyticum DSM 571]
gi|302778706|gb|ADL69265.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase
[Thermoanaerobacterium thermosaccharolyticum DSM 571]
Length = 454
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/292 (30%), Positives = 152/292 (52%), Gaps = 25/292 (8%)
Query: 25 GKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSE 84
G V+ E++FA ++ I A+TGTNGK+T + +G++ + G+ +V GN+G PL E
Sbjct: 92 GIEVIGEVEFAYRL--SKAPIYAITGTNGKTTTTSLLGEIFKNSGVRTYVAGNIGYPLVE 149
Query: 85 AAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYAL 144
AA V V E+SS+Q+E K F P +S ++N+TPDHL RHKT++NY
Sbjct: 150 AAVKA-------GNDDVIVAEISSFQLETI-KEFRPVISAIINITPDHLNRHKTLENYIN 201
Query: 145 TKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAV 204
K +F + + +L + +++++ F+ A FP + E +
Sbjct: 202 IKGRIFENQSFNEYTVLNYDDKNISSL-----FDRAKCKVFPFSMEKILYRGTYVENGKI 256
Query: 205 GVVSQ------LQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHR 258
+ S + ++++ + G HN NA VA S + G+DV +N+T++ + HR
Sbjct: 257 VISSNGEKNTIIDINDIYIPGNHNVENAMVA--STMAFLAGIDVNIINTTLKTFKGVEHR 314
Query: 259 MQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQE 310
++ V R I GV + +DSK TN +A + +KG +++ GG K ++ E
Sbjct: 315 IEFV-RSINGVKYYNDSKGTNPDAAIKAIEAMKG-PIILIAGGYDKGVSFDE 364
>gi|303246305|ref|ZP_07332585.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Desulfovibrio
fructosovorans JJ]
gi|302492368|gb|EFL52240.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Desulfovibrio
fructosovorans JJ]
Length = 441
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/298 (31%), Positives = 143/298 (47%), Gaps = 40/298 (13%)
Query: 6 LFLLEFQLKATGLACLLQS--GKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQ 63
+ +L ++A GLA L + G +V+SEL+ A+ + + I+AVTG+NGK+T V V
Sbjct: 78 MVVLSPGIRAAGLADCLAACPGAQVLSELELASWFV--TEPIVAVTGSNGKTTTVMLVSH 135
Query: 64 MLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVS 123
+L G + F GGN+G PLSE + P V V+EVSS+Q+++ K F P V+
Sbjct: 136 LLEAAGRKVFTGGNIGTPLSEYVL------AGDPA-DVVVLEVSSFQLQL-VKSFRPKVA 187
Query: 124 VVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIG 183
V+LN +P+HL+ H ++ Y K ++F+ +LP + + +A+ G F A +
Sbjct: 188 VLLNFSPNHLDWHADLEEYLSAKLNIFAAQRPGDTAILP---RDMRDALAGRSFTRADVT 244
Query: 184 AFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVE 243
F + F P ++ G HN N A L+ GV E
Sbjct: 245 WF--------EPSGRFVCP-------------RLAGAHNRQNMEAAFLAT--QPFGVTEE 281
Query: 244 ALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGG 301
E PHR+QI+ + GV +VDDSKAT + A L +L GG
Sbjct: 282 IAKVAFERFAPAPHRLQIIG-EKGGVLFVDDSKATTVAAMEAALRSFD-RPVRLLCGG 337
>gi|319938114|ref|ZP_08012512.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Coprobacillus sp.
29_1]
gi|319806635|gb|EFW03284.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Coprobacillus sp.
29_1]
Length = 447
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 161/313 (51%), Gaps = 36/313 (11%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
L + G V +E++ A + + + +A+TGTNGK+T VT + +L + G + + GN+G
Sbjct: 87 LKERGIPVYTEIELAYR-LSQPQNYIAITGTNGKTTTVTLIRDILKNAGRQVCLAGNVGT 145
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMK 140
PLSE + L K + V V+E+S++Q+ + F P V+ ++NLTPDHL+ +++
Sbjct: 146 PLSELVLNEDLL--HKSDYDV-VLEMSNFQL-LDIDAFHPRVATIINLTPDHLDYMASLE 201
Query: 141 NYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFE 200
Y +K ++ + + + L + L E ++ +P +AK SF
Sbjct: 202 EYYTSKTRIYMNQDHNDIYLQNKDDVVLKE----------YLQKYP-----PQAKIVSFS 246
Query: 201 V----------PAVGVVSQ--LQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNST 248
+ A+ Q + L ++K++GRHN N +A + + G+DV++++ T
Sbjct: 247 LEQEADCMIKNDAIYYQGQHIINLDDIKIVGRHNIQNMMIAICACIHS--GIDVQSIHDT 304
Query: 249 IEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNG 308
+ HR++ V R+ QGV + +DSKATN +A L + ++L+GG K L+
Sbjct: 305 LAAFTGVEHRIEFV-REYQGVKYYNDSKATNTDAAIIALKSFE-KPVILLMGGHEKGLDL 362
Query: 309 QESNGFEKLIEPL 321
+E ++K I L
Sbjct: 363 REMANYQKQISHL 375
>gi|54298605|ref|YP_124974.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Legionella
pneumophila str. Paris]
gi|62900489|sp|Q5X1S4.1|MURD_LEGPA RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|53752390|emb|CAH13822.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Legionella
pneumophila str. Paris]
Length = 447
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 155/322 (48%), Gaps = 59/322 (18%)
Query: 23 QSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPL 82
Q+G + +++ A+ I S ++A+TGTNGKSTV T VG+M G V GN+G P+
Sbjct: 87 QAGASIYGDIECLAREI--SAPVIAITGTNGKSTVTTLVGEMAKAAGFRVAVAGNIGTPV 144
Query: 83 SEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNY 142
+ + + + + V+E+SS+Q+++ P V+ +LN+TPDHL+RH TM+ Y
Sbjct: 145 -------LDMLDDEHHYDLWVLELSSFQLDL-TYSLSPVVATILNVTPDHLDRHHTMEAY 196
Query: 143 ALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASF--E 200
K Q + K FN + P T+ K SF +
Sbjct: 197 TQAK-------------------QRIYRGAKAVLFNREDVYTVPHQSCQTDIKCISFGKD 237
Query: 201 VPAV---GVVSQ-------------LQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEA 244
P++ G++ Q L + ++ + G HN+ NA A G+ ++
Sbjct: 238 APSMGNWGLIEQENTTYLAKGMERLLPVESILIKGVHNWMNALAACALAEAA--GISMQH 295
Query: 245 LNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGH---KCVILLGG 301
+ + ++ PHR Q V R++ GV W++DSK TN+ AT + + + G K V++ GG
Sbjct: 296 ILNVLKTFPGLPHRCQWV-REVDGVGWINDSKGTNIGATISAINGIGGSMQGKIVLIAGG 354
Query: 302 QAKVLNGQESNGFEKLIEPLNH 323
Q K + F++L +P++
Sbjct: 355 QGKGAD------FQELAQPVSE 370
>gi|94970658|ref|YP_592706.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Candidatus
Koribacter versatilis Ellin345]
gi|122063234|sp|Q1IKG8.1|MURD_ACIBL RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|94552708|gb|ABF42632.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Candidatus
Koribacter versatilis Ellin345]
Length = 453
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 140/285 (49%), Gaps = 19/285 (6%)
Query: 23 QSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPL 82
+ G V+ E++ AAQ +P + +A+TG+NGK+T + G +L G + VGGN+G P
Sbjct: 90 KQGIPVIGEIELAAQFVPGHV--IAITGSNGKTTTTSLCGDILQSGGKKTLVGGNIGTP- 146
Query: 83 SEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNY 142
I+ +V+E+SS+Q+E + F P ++ +LN+TPDHL+RH T + Y
Sbjct: 147 ------AISFAQLANDDTWSVLEISSFQLETIER-FRPEIAAILNITPDHLDRHGTFEKY 199
Query: 143 ALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTAS--FE 200
A K +F + +L N+ E K + + W VK T + F
Sbjct: 200 AAAKERIFENQREHDFAILNADNEPCVEIAKRVKSQVLWFSRQHEVKHGTFVREDKIYFR 259
Query: 201 VPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQ 260
P G + + +M + G HN N V A +G+ V E + + + HR++
Sbjct: 260 DPK-GEREIMPVADMLLKGAHNVEN--VLAAVCVGVAASVAPEQIRKAVSQFKAVEHRLE 316
Query: 261 IVHRDIQGVTWVDDSKATNLEATCTGLMDL-KGHKCVILLGGQAK 304
++GV + +DSKATN++AT L KG ++LGG+ K
Sbjct: 317 YTA-TVKGVDYYNDSKATNVDATIKALESFSKG--VHLILGGKDK 358
>gi|297539594|ref|YP_003675363.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Methylotenera
versatilis 301]
gi|297258941|gb|ADI30786.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Methylotenera
versatilis 301]
Length = 452
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 149/291 (51%), Gaps = 31/291 (10%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
+Q G V +++ AQ P S K++A+TG NGK+TV T VG++ G++ V GN+G P
Sbjct: 90 VQRGVSVAGDVELFAQYRPTSAKVIAITGANGKTTVTTLVGEICKAAGLKTIVAGNIGLP 149
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
+ + AL P V V+E+SS+Q+E + + +LNL+ DH++R+ + ++
Sbjct: 150 VLD------ALMMETP--DVYVLELSSFQLETTSNLQI-DAATMLNLSEDHMDRYASFQD 200
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEV 201
YA+ K +F N KL +L N+ ++ R LA + +D + + S+ +
Sbjct: 201 YAIAKARIF---YNAKLQVL---NRDDAWSMMMARPKLAQV----TFGLDDDGEETSYGL 250
Query: 202 PAV--------GVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILR 253
V G + L ++K++G HN NA A G IGVD + T+ +
Sbjct: 251 KQVDGDTWLCEGDKELINLQDLKIVGLHNAANALAAVALCRG--IGVDYAHIIQTLYNFK 308
Query: 254 TPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
PHR++ V +I V + DDSK TN+ ATC L L K V++ GG K
Sbjct: 309 GLPHRVEWVA-NIDDVDYYDDSKGTNVGATCAALTGL-AQKVVLIAGGDGK 357
>gi|313200239|ref|YP_004038897.1| UDP-N-acetylmuramoylalanine/d-glutamate ligase [Methylovorus sp.
MP688]
gi|312439555|gb|ADQ83661.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Methylovorus sp.
MP688]
Length = 460
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 100/324 (30%), Positives = 149/324 (45%), Gaps = 50/324 (15%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L +G +V+ +++ AQ PRS K++A+TG NGK+TV T VG+M G++ V GN+G P
Sbjct: 89 LANGIQVVGDVELFAQFRPRSSKVIAITGANGKTTVTTLVGEMCKAAGLKTVVAGNIGLP 148
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
+ +A + V V+E+SS+Q+E P + VLN+T DH++R+ M
Sbjct: 149 VLDALRQV----ETDGAPDVYVLELSSFQLET-TSSLAPDAAAVLNVTEDHMDRYPGMPE 203
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIG--AFPGVKIDTEAKTASF 199
YA K + G Q LN AW A P + T
Sbjct: 204 YAAAKARILKGA----------GVQVLNR-------EDAWCRNMALPDQPVVTFGLDLPV 246
Query: 200 EVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGL--------------DIGVDVEAL 245
E A G+ L LH+ + + + V L + GL IGVD L
Sbjct: 247 ESHAYGL---LALHDQLWLAQGAHPILHVEELRIPGLHNAANALAALALCRAIGVDWAPL 303
Query: 246 NSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKV 305
+ + PHR++ V D+ + + DDSK TN+ ATC L L K V++ GG K
Sbjct: 304 QHVLREFKGLPHRVEWVA-DLHDIAFYDDSKGTNVGATCAALAGLP-RKVVLIAGGDGK- 360
Query: 306 LNGQESNGFEKLIEPLNHH-RCVI 328
GQ+ F L EP++ + R V+
Sbjct: 361 --GQD---FSPLREPVDQNARAVV 379
>gi|148358649|ref|YP_001249856.1| UDP-N-muramoylalanine-D-glutamate ligase [Legionella pneumophila
str. Corby]
gi|296108261|ref|YP_003619962.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Legionella
pneumophila 2300/99 Alcoy]
gi|148280422|gb|ABQ54510.1| UDP-N-muramoylalanine-D-glutamate ligase [Legionella pneumophila
str. Corby]
gi|295650163|gb|ADG26010.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Legionella
pneumophila 2300/99 Alcoy]
Length = 447
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 155/322 (48%), Gaps = 59/322 (18%)
Query: 23 QSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPL 82
Q+G + +++ A+ I S ++A+TGTNGKSTV T VG+M G V GN+G P+
Sbjct: 87 QAGASIYGDIECLAREI--SAPVIAITGTNGKSTVTTLVGEMAKAAGFRVAVAGNIGTPV 144
Query: 83 SEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNY 142
+ + + + + V+E+SS+Q+++ P V+ +LN+TPDHL+RH TM+ Y
Sbjct: 145 -------LDMLDDEHHYDLWVLELSSFQLDL-TYSLSPVVATILNVTPDHLDRHHTMEAY 196
Query: 143 ALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASF--E 200
K ++S K FN + P + K SF +
Sbjct: 197 TQAKQRIYS-------------------GAKAVLFNREDVYTVPHQSCQADIKCISFGKD 237
Query: 201 VPAV---GVVSQ-------------LQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEA 244
P++ G++ Q L + ++ + G HN+ NA A G+ ++
Sbjct: 238 APSMGNWGLIEQENTTYLAKGMERLLPVESILIKGVHNWMNALAACALAEAA--GISMQH 295
Query: 245 LNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGH---KCVILLGG 301
+ + ++ PHR Q V R++ GV W++DSK TN+ AT + + + G K V++ GG
Sbjct: 296 ILNVLKTFPGLPHRCQWV-REVDGVGWINDSKGTNIGATISAINGIGGSMQGKIVLIAGG 354
Query: 302 QAKVLNGQESNGFEKLIEPLNH 323
Q K + F++L +P++
Sbjct: 355 QGKGAD------FQELAQPVSE 370
>gi|335044836|ref|ZP_08537859.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Oribacterium
sp. oral taxon 108 str. F0425]
gi|333758622|gb|EGL36179.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Oribacterium
sp. oral taxon 108 str. F0425]
Length = 454
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/278 (31%), Positives = 144/278 (51%), Gaps = 20/278 (7%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V+ E++ A Q K+ AVTGTNGK+T V+ +G++L + V GN+GNP + A
Sbjct: 97 VIGEIELAYQSCKG--KLCAVTGTNGKTTTVSLIGEILKSQYPDTHVVGNIGNPFTAEAL 154
Query: 88 HCIALPSSKPKFQVAVVEVSSYQME-IPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTK 146
+ V V EVSS+Q+E I + F P VS + N+TPDHL+RHKTMKNY K
Sbjct: 155 DT-------EEQSVTVCEVSSFQLESIVD--FRPNVSAITNITPDHLDRHKTMKNYIAIK 205
Query: 147 CHLFSHMVNTKLGLLPFGNQHLNE--AIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAV 204
+ + +L + + L + +G + N+ W + K + F
Sbjct: 206 ESIAVNQTEEDSIVLNYMDSELRKFGKKRGLKPNVLWFSSEEEPKEGFFLRGEEFIYKNK 265
Query: 205 GVVSQL-QLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVH 263
+L + +++++G+HNY N + A+ V L +GV ++ + + + HR++ V
Sbjct: 266 EKEEKLFKTGDLQLLGKHNYEN-VMCAMGV-ALKMGVPMDKIVKVCKKFKPVEHRIEFV- 322
Query: 264 RDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGG 301
R+ GV + +DSK TN++A L + G V+L+GG
Sbjct: 323 RERSGVRYYNDSKGTNVDAAIQALRAMPGP--VLLIGG 358
>gi|363897965|ref|ZP_09324502.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Oribacterium sp.
ACB7]
gi|361957610|gb|EHL10917.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Oribacterium sp.
ACB7]
Length = 454
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/278 (31%), Positives = 144/278 (51%), Gaps = 20/278 (7%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V+ E++ A Q K+ AVTGTNGK+T V+ +G++L + V GN+GNP + A
Sbjct: 97 VIGEIELAYQSCKG--KLCAVTGTNGKTTTVSLIGEILKSQYPDTHVVGNIGNPFTAEAL 154
Query: 88 HCIALPSSKPKFQVAVVEVSSYQME-IPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTK 146
+ V V EVSS+Q+E I + F P VS + N+TPDHL+RHKTMKNY K
Sbjct: 155 DT-------EEQSVTVCEVSSFQLESIVD--FRPNVSAITNITPDHLDRHKTMKNYIAIK 205
Query: 147 CHLFSHMVNTKLGLLPFGNQHLNE--AIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAV 204
+ + +L + + L + +G + N+ W + K + F
Sbjct: 206 ESIAVNQTEEDSIVLNYMDSELRKFGKKRGLKPNVLWFSSEEEPKEGFFLRGEEFIYKNK 265
Query: 205 GVVSQL-QLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVH 263
+L + +++++G+HNY N + A+ V L +GV ++ + + + HR++ V
Sbjct: 266 EKEEKLFKTGDLQLLGKHNYEN-VMCAMGV-ALKMGVPMDKIVKVCKKFKPVEHRIEFV- 322
Query: 264 RDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGG 301
R+ GV + +DSK TN++A L + G V+L+GG
Sbjct: 323 RERSGVRYYNDSKGTNVDAAIQALRAMPGP--VLLIGG 358
>gi|397668289|ref|YP_006509826.1| UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase [Legionella
pneumophila subsp. pneumophila]
gi|395131700|emb|CCD09993.1| UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase [Legionella
pneumophila subsp. pneumophila]
Length = 447
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 154/322 (47%), Gaps = 59/322 (18%)
Query: 23 QSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPL 82
Q+G + +++ A+ I S ++A+TGTNGKSTV T VG+M G V GN+G P+
Sbjct: 87 QAGASIYGDIECLAREI--SAPVIAITGTNGKSTVTTLVGEMAKAAGFRVAVAGNIGTPV 144
Query: 83 SEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNY 142
+ + + + + V+E+SS+Q+++ P V+ +LN+TPDHL+RH TM+ Y
Sbjct: 145 -------LDMLDDEHHYDLWVLELSSFQLDL-TYSLSPVVATILNVTPDHLDRHHTMEAY 196
Query: 143 ALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASF--E 200
K Q + K FN + P + K SF +
Sbjct: 197 TQAK-------------------QRIYRGAKAVLFNREDVYTVPHQSCQADIKCISFGKD 237
Query: 201 VPAV---GVVSQ-------------LQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEA 244
P++ G++ Q L + ++ + G HN+ NA A G+ ++
Sbjct: 238 APSMGNWGLIEQENTTYLAKGMERLLPVESILIKGVHNWMNALAACALAEAA--GISMQH 295
Query: 245 LNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGH---KCVILLGG 301
+ + ++ PHR Q V R++ GV W++DSK TN+ AT + + + G K V++ GG
Sbjct: 296 ILNVLKTFPGLPHRCQWV-REVDGVGWINDSKGTNIGATISAINGIGGSMQGKIVLIAGG 354
Query: 302 QAKVLNGQESNGFEKLIEPLNH 323
Q K + F++L +P++
Sbjct: 355 QGKGAD------FQELAQPVSE 370
>gi|52842822|ref|YP_096621.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Legionella
pneumophila subsp. pneumophila str. Philadelphia 1]
gi|378778511|ref|YP_005186950.1| UDP-N-muramoylalanine-D-glutamate ligase [Legionella pneumophila
subsp. pneumophila ATCC 43290]
gi|62900494|sp|Q5ZSA3.1|MURD_LEGPH RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|52629933|gb|AAU28674.1| UDP-N-muramoylalanine-D-glutamate ligase [Legionella pneumophila
subsp. pneumophila str. Philadelphia 1]
gi|364509327|gb|AEW52851.1| UDP-N-muramoylalanine-D-glutamate ligase [Legionella pneumophila
subsp. pneumophila ATCC 43290]
Length = 447
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 154/322 (47%), Gaps = 59/322 (18%)
Query: 23 QSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPL 82
Q+G + +++ A+ I S ++A+TGTNGKSTV T VG+M G V GN+G P+
Sbjct: 87 QAGASIYGDIECLAREI--SAPVIAITGTNGKSTVTTLVGEMAKAAGFRVAVAGNIGTPV 144
Query: 83 SEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNY 142
+ + + + + V+E+SS+Q+++ P V+ +LN+TPDHL+RH TM+ Y
Sbjct: 145 -------LDMLDDEHHYDLWVLELSSFQLDL-TYSLSPVVATILNVTPDHLDRHHTMEAY 196
Query: 143 ALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASF--E 200
K Q + K FN + P + K SF +
Sbjct: 197 TQAK-------------------QRIYRGAKAVLFNREDVYTVPHQSCQADIKCISFGKD 237
Query: 201 VPAV---GVVSQ-------------LQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEA 244
P++ G++ Q L + ++ + G HN+ NA A G+ ++
Sbjct: 238 APSMGNWGLIEQENTTYLAKGMERLLPVESILIKGVHNWMNALAACALAEAA--GISMQH 295
Query: 245 LNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGH---KCVILLGG 301
+ + ++ PHR Q V R++ GV W++DSK TN+ AT + + + G K V++ GG
Sbjct: 296 ILNVLKTFPGLPHRCQWV-REVDGVGWINDSKGTNIGATISAINGIGGSMQGKIVLIAGG 354
Query: 302 QAKVLNGQESNGFEKLIEPLNH 323
Q K + F++L +P++
Sbjct: 355 QGKGAD------FQELAQPVSE 370
>gi|307611494|emb|CBX01167.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Legionella
pneumophila 130b]
Length = 447
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 154/322 (47%), Gaps = 59/322 (18%)
Query: 23 QSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPL 82
Q+G + +++ A+ I S ++A+TGTNGKSTV T VG+M G V GN+G P+
Sbjct: 87 QAGASIYGDIECLAREI--SAPVIAITGTNGKSTVTTLVGEMAKAAGFRVAVAGNIGTPV 144
Query: 83 SEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNY 142
+ + + + + V+E+SS+Q+++ P V+ +LN+TPDHL+RH TM+ Y
Sbjct: 145 -------LDMLDDEHHYDLWVLELSSFQLDL-TYSLSPVVATILNVTPDHLDRHHTMEAY 196
Query: 143 ALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASF--E 200
K Q + K FN + P + K SF +
Sbjct: 197 TQAK-------------------QRIYRGAKAVLFNREDVYTVPHQSCQADIKCISFGKD 237
Query: 201 VPAV---GVVSQ-------------LQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEA 244
P++ G++ Q L + ++ + G HN+ NA A G+ ++
Sbjct: 238 APSMGNWGLIEQENTIYLAKGMERLLPVESILIKGVHNWMNALAACALAEAA--GISMQH 295
Query: 245 LNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGH---KCVILLGG 301
+ + ++ PHR Q V R++ GV W++DSK TN+ AT + + + G K V++ GG
Sbjct: 296 ILNVLKTFPGLPHRCQWV-REVDGVGWINDSKGTNIGATISAINGIGGSMQGKIVLIAGG 354
Query: 302 QAKVLNGQESNGFEKLIEPLNH 323
Q K + F++L +P++
Sbjct: 355 QGKGAD------FQELAQPVSE 370
>gi|387824847|ref|YP_005824318.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Francisella cf.
novicida 3523]
gi|332184313|gb|AEE26567.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Francisella cf.
novicida 3523]
Length = 417
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/284 (31%), Positives = 142/284 (50%), Gaps = 46/284 (16%)
Query: 27 RVMSELDFAAQVIPRS-IKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEA 85
+++S++D Q I + K +AVTG+NGKSTVVT +L LG ++ + GN+G P
Sbjct: 80 KIVSDIDIFYQYIKDTKAKTIAVTGSNGKSTVVTMTDFVLKDLGYKSILVGNIGTP---- 135
Query: 86 AFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSV--VLNLTPDHLERHKTMKNYA 143
AL KF +VEVSS+Q+++ N C + V+N++PDHL+R++ + Y
Sbjct: 136 -----ALNKIGEKFDYCIVEVSSFQIDLFN---CVRFDLGCVINVSPDHLDRYQNFEEYK 187
Query: 144 LTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPA 203
+KL L F N + H + + G + + + A +
Sbjct: 188 -----------QSKLNLAKFSNDFFVYDV--HNNGIKYAGEYQII------RGAIYR--- 225
Query: 204 VGVVSQLQLHNMKVMGRHNYHNAAVA--ALSVLGLDIGVDVEALNSTIEILRTPPHRMQI 261
G + L + + G HN N V L LGLDI +A++S I+ + HR +I
Sbjct: 226 -GSIKLLDITETNLYGEHNLENIIVVLNILDRLGLDIN---QAIDS-IKKFKGLEHRCKI 280
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVI-LLGGQAK 304
V + + G+T+++DSK TN+ AT L + K +I LLGG AK
Sbjct: 281 VKK-VNGITYINDSKGTNVGATIAALNSITNSKNIILLLGGVAK 323
>gi|421562625|ref|ZP_16008451.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis NM2795]
gi|421907404|ref|ZP_16337281.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Neisseria
meningitidis alpha704]
gi|393291479|emb|CCI73272.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Neisseria
meningitidis alpha704]
gi|402342769|gb|EJU77927.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis NM2795]
Length = 451
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 145/292 (49%), Gaps = 30/292 (10%)
Query: 23 QSGKRVMSELDFAAQVI-PRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
++G RV+ +++ A ++ R K++A+TG+NGK+TV + VG + G++ + GN+G P
Sbjct: 89 RNGGRVLGDIELLADIVNRRGDKVIAITGSNGKTTVTSLVGYLCIKCGLDTVIAGNIGTP 148
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
+ EA + K V V+E+SS+Q+E + CPT + VLN++ DHL+R+ + +
Sbjct: 149 VLEAEWQ-----REGKKADVWVLELSSFQLE-NTESLCPTAATVLNISEDHLDRYDDLLD 202
Query: 142 YALTKCHLFS----HMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVK--IDTE-A 194
YA TK +F ++N + A+K + W +D E +
Sbjct: 203 YAHTKAKIFRGDGVQVLNA--------DDAFCRAMKRAGREVKWFSLEHKADFWLDKEGS 254
Query: 195 KTASFEVPAVGVVSQLQLHNMKVMGRHNYHN--AAVAALSVLGLDIGVDVEALNSTIEIL 252
T G + ++ + G HN N AAVA +GL EAL ++
Sbjct: 255 TTGGLRTLKQGNEDLIATQDIPLQGLHNAANIMAAVALCEAIGL----PREALLEHVKTF 310
Query: 253 RTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
+ PHR++ + GV ++DDSK TN+ AT + L+ + ++LGG K
Sbjct: 311 QGLPHRVEKIGEK-NGVVFIDDSKGTNVGATAAAIAGLQ-NPLFVILGGMGK 360
>gi|253998170|ref|YP_003050233.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Methylovorus
glucosetrophus SIP3-4]
gi|253984849|gb|ACT49706.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Methylovorus
glucosetrophus SIP3-4]
Length = 460
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/326 (29%), Positives = 149/326 (45%), Gaps = 54/326 (16%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L +G +V+ +++ AQ PRS K++A+TG NGK+TV T VG+M G++ V GN+G P
Sbjct: 89 LANGIQVVGDVELFAQFRPRSSKVIAITGANGKTTVTTLVGEMCKAAGLKTVVAGNIGLP 148
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
+ +A + V V+E+SS+Q+E P + VLN+T DH++R+ M
Sbjct: 149 VLDALRQV----ETDGAPDVYVLELSSFQLET-TSSLAPDAAAVLNVTEDHMDRYPGMPE 203
Query: 142 YALTKCHLF------------SHMVNTKLGLLPFGNQHLNEAIKGHRFNL------AWIG 183
YA K + + N L P L+ ++ H + L W+
Sbjct: 204 YAAAKARILKGAGVQVLNREDAWCRNMALPDQPMVTFGLDLPVESHAYGLLALRDQLWL- 262
Query: 184 AFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVE 243
A G L + +++ G HN NA A IGVD
Sbjct: 263 -------------------AQGAHPILHVEELRIPGLHNAANALAALALCRA--IGVDWA 301
Query: 244 ALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQA 303
L + + PHR++ V D+ + + DDSK TN+ ATC L L K V++ GG
Sbjct: 302 PLQHVLREFKGLPHRVEWVA-DLHDIAFYDDSKGTNVGATCAALAGLP-RKVVLIAGGDG 359
Query: 304 KVLNGQESNGFEKLIEPLNHH-RCVI 328
K GQ+ F L EP++ + R V+
Sbjct: 360 K---GQD---FSPLREPVDQNARAVV 379
>gi|54295453|ref|YP_127868.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Legionella
pneumophila str. Lens]
gi|62900487|sp|Q5WTI5.1|MURD_LEGPL RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|53755285|emb|CAH16779.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Legionella
pneumophila str. Lens]
Length = 447
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 154/322 (47%), Gaps = 59/322 (18%)
Query: 23 QSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPL 82
Q+G + +++ A+ I S ++A+TGTNGKSTV T VG+M G V GN+G P+
Sbjct: 87 QAGALIYGDIECLAREI--SAPVIAITGTNGKSTVTTLVGEMAKAAGFRVAVAGNIGTPV 144
Query: 83 SEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNY 142
+ + + + + V+E+SS+Q+++ P V+ +LN+TPDHL+RH TM+ Y
Sbjct: 145 -------LDMLDDEHHYDLWVLELSSFQLDL-TYSLSPVVATILNVTPDHLDRHHTMEAY 196
Query: 143 ALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASF--E 200
K Q + K FN + P + K SF +
Sbjct: 197 TQAK-------------------QRIYRGAKAVLFNREDVYTVPHQSCQADIKCISFGKD 237
Query: 201 VPAV---GVVSQ-------------LQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEA 244
P++ G++ Q L + ++ + G HN+ NA A G+ ++
Sbjct: 238 APSMGNWGLIEQENTIYLAKGMERLLPVESILIKGVHNWMNALAACALAEAA--GISMQH 295
Query: 245 LNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGH---KCVILLGG 301
+ + ++ PHR Q V R++ GV W++DSK TN+ AT + + + G K V++ GG
Sbjct: 296 ILNVLKTFPGLPHRCQWV-REVDGVGWINDSKGTNIGATISAINGIGGSMQGKIVLIAGG 354
Query: 302 QAKVLNGQESNGFEKLIEPLNH 323
Q K + F++L +P++
Sbjct: 355 QGKGAD------FQELAQPVSE 370
>gi|365873705|ref|ZP_09413238.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Thermanaerovibrio
velox DSM 12556]
gi|363983792|gb|EHM09999.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Thermanaerovibrio
velox DSM 12556]
Length = 463
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 96/300 (32%), Positives = 150/300 (50%), Gaps = 32/300 (10%)
Query: 18 LACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGN 77
L+ G V+ ELDF A + + ++AVTG+NGK+T +G + LG++ GN
Sbjct: 87 LSLARDKGIPVVGELDFVAPFL--DVPVIAVTGSNGKTTTTGMLGHFFSSLGLKVVTAGN 144
Query: 78 LGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTV----SVVLNLTPDHL 133
+GNP++ +P QV V EVSS+Q+ ++C + SVV N+ PDH+
Sbjct: 145 IGNPIA-------LVPVCFSDSQVVVAEVSSFQL-----FWCSSATFVGSVVTNIAPDHI 192
Query: 134 ERHKTMKNYALTKCHLFSHMVNTKLGLLPFGNQH-LNEAIKGHR-FNLAWIGAF--PGVK 189
+ H + +NY +K + + ++ + + L + H+ L W A V
Sbjct: 193 DWHGSFENYVASKKRAMERTMLSGFSIIQRSDANILGASGLSHKVLTLTWGHALGEQDVC 252
Query: 190 IDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLG-LDIGVDVEALNST 248
+D +AK A + + + +K++G+HN NAA+A S L V E +N
Sbjct: 253 LDDDAKEARMILDGQ-PIRLFRFEEVKLLGKHNLENAAMALASAAMFLRRPVSGEEVN-- 309
Query: 249 IEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLK----GHKCVILLGGQAK 304
I + PPHR ++ + GV +VDDSK TN+ AT T L LK G K +ILLGG+ K
Sbjct: 310 IAGFKAPPHRCELAGV-VNGVIFVDDSKGTNVAATVTALKSLKCPGNGRK-IILLGGRGK 367
>gi|83589692|ref|YP_429701.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Moorella
thermoacetica ATCC 39073]
gi|118595666|sp|Q2RK81.1|MURD_MOOTA RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|83572606|gb|ABC19158.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Moorella
thermoacetica ATCC 39073]
Length = 455
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 97/289 (33%), Positives = 149/289 (51%), Gaps = 14/289 (4%)
Query: 18 LACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGN 77
LA G V SEL+ A +++P +K++A+TGTNGK+T + G++L G A VGGN
Sbjct: 83 LARARARGIPVWSELELAYRLLPPGVKVVAITGTNGKTTTTSLCGRILQEAGWPAVVGGN 142
Query: 78 LGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK 137
+G PL + IA P S V EVSS+Q+E F P V+ +LN+TPDHL+RH
Sbjct: 143 IGIPLVK-ELQEIA-PGS-----YVVCEVSSFQLEAITS-FHPQVAAILNITPDHLDRHG 194
Query: 138 TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIG--AFPGVKIDTEAK 195
+++NY K + ++ +L + + H G R + + P + E
Sbjct: 195 SLENYIAAKARVMAYQEARDFAILNYDDPHTRSLAGGARSRVLFFSRRERPPLGAWLEDG 254
Query: 196 TASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTP 255
++ A G V + + G HN N+ AAL L +GVD E L T++
Sbjct: 255 VICCDLGAGGTVKLCHCEELSLKGSHNLENSMAAALVA--LALGVDPEQLTRTLKTFPAV 312
Query: 256 PHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
PHR++ V +I GV +++DSK TN EAT + + + V++ GG+ K
Sbjct: 313 PHRLEPVA-EINGVCYINDSKGTNPEATMKAI-NAYSNPLVLIAGGRNK 359
>gi|451949061|ref|YP_007469656.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Desulfocapsa
sulfexigens DSM 10523]
gi|451908409|gb|AGF80003.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Desulfocapsa
sulfexigens DSM 10523]
Length = 461
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/285 (31%), Positives = 136/285 (47%), Gaps = 37/285 (12%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
++ EL AA I + +AVTGTNGK+TV +G++L G + FVGGN+G P+
Sbjct: 101 ILGELALAAPYITECV--VAVTGTNGKTTVTALIGELLRASGKKVFVGGNIGTPVLNYLL 158
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
+ V+E+SS+Q+E FCP + V+LN+TPDHL+RH +M NYA K
Sbjct: 159 -------GDERADYLVLELSSFQLESAGS-FCPHIGVLLNITPDHLDRHGSMVNYAAAKM 210
Query: 148 HLFSHMVNTKLGLLPFGNQ---HLNEAIKGHRF--------NLAWIGAFPGVKIDTEAKT 196
+F H +L + H+ E + G N A G V I +T
Sbjct: 211 KMFVHQKADDKAILCSDDPMCLHVRELLNGQEVYCFGNPASNCAATGNDRKVCITLPDRT 270
Query: 197 ASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPP 256
S+E+ + S + N AA+ A+S+L G + + + ++
Sbjct: 271 DSYELAGTKLDSHTGMLN---------SCAAILAVSLL----GCEKNDIANGLKYFAPAD 317
Query: 257 HRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGG 301
HR+Q V R +GV + +DSKATN A + L K VIL+ G
Sbjct: 318 HRLQHV-RLRKGVDYYNDSKATNTGAVISALCSFS--KGVILIAG 359
>gi|442770733|gb|AGC71440.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [uncultured
bacterium A1Q1_fos_1070]
Length = 499
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 141/309 (45%), Gaps = 40/309 (12%)
Query: 23 QSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPL 82
Q+G + E++ A+Q I + I+ +TGTNGKSTV + G + +F GGNLG PL
Sbjct: 96 QAGVPITGEIELASQYI--TAPIVGITGTNGKSTVTSLCGAIAKATARPSFCGGNLGTPL 153
Query: 83 SEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNY 142
+A + ++ PK + V+E+SSYQ+E C + +LNLTPDHL+R+ +++ Y
Sbjct: 154 IDA----VGTAAASPK-GIVVIELSSYQLETCETLSC-HAAALLNLTPDHLDRYPSLREY 207
Query: 143 ALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHR------FNLAWIGAFPGVKIDT---- 192
K +F +M ++ + + H F A + P ++
Sbjct: 208 GDAKARIFRNMAPWSPRVVSADDPEVQALYARHLGSSDPCFLFATQSSLPSRRVQGRMLQ 267
Query: 193 ------------EAKTASFEVPAVG---VVSQLQLHNMKVMGRHNYHN--AAVAALSVLG 235
T F+ G + L +++GRHN N AA + G
Sbjct: 268 LGGFVEDGHLVLRGVTGGFDAAQKGQEVKEERYSLGEFQLVGRHNQANMLAAFLLMRASG 327
Query: 236 LDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKC 295
L +V + L PHRMQ++ + QGV + DDSK TN++A GL
Sbjct: 328 LASYDEVRRAAQSFSAL---PHRMQLIG-EAQGVAFFDDSKGTNVDAVVAGLAGFP-RPL 382
Query: 296 VILLGGQAK 304
V++ GG+ K
Sbjct: 383 VLIAGGRDK 391
>gi|374621731|ref|ZP_09694261.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Ectothiorhodospira
sp. PHS-1]
gi|373940862|gb|EHQ51407.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Ectothiorhodospira
sp. PHS-1]
Length = 436
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 94/288 (32%), Positives = 147/288 (51%), Gaps = 38/288 (13%)
Query: 27 RVMSELD-FAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEA 85
RV+ +++ FA Q +LA+TG+NGKSTV T VG+M G++ VGGNLG P
Sbjct: 85 RVLGDIELFAGQA---DAPVLAITGSNGKSTVTTLVGEMARAAGLQVAVGGNLGTP---- 137
Query: 86 AFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALT 145
+ L +S+ + V+E+SS+Q+E + C + VLNL+ DHL+R++ + +YAL
Sbjct: 138 ---ALDLLASRSAPDLYVLELSSFQLETTSGLRC-AAAAVLNLSADHLDRYEGLDDYALA 193
Query: 146 KCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFP-----GVKIDTEAKTASFE 200
K +F H ++ ++ + + A+ G R +++ P G+K D + + +
Sbjct: 194 KARIFRH---ARVAVINREDPRVR-AMPGGRSRVSFGLDVPAEGQYGLK-DQDGGSWLYR 248
Query: 201 VPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRT---PPH 257
G L +++ GRHN NA A + D + +LR PH
Sbjct: 249 ----GDEPLLAEAELRMAGRHNTANALAALALGEAAGLPRD-----DMLAVLRRFAGLPH 299
Query: 258 RMQ-IVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
R + + HR QGV W +DSK TNL +T L L G K V++ GGQ K
Sbjct: 300 RCRWVAHR--QGVDWYNDSKGTNLGSTLAALAGLPG-KVVLIAGGQGK 344
>gi|429727328|ref|ZP_19262102.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
[Peptostreptococcus anaerobius VPI 4330]
gi|429152780|gb|EKX95590.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
[Peptostreptococcus anaerobius VPI 4330]
Length = 457
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 154/285 (54%), Gaps = 21/285 (7%)
Query: 26 KRVMSELDFAAQV-IPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSE 84
K+V+SE++ A Q + ++I+ + +TGTNGK+T + VG++ G+E +V GN+GNP
Sbjct: 94 KKVISEIELAYQAGLKKNIRFVGITGTNGKTTTTSLVGEIFKAQGVETYVVGNIGNP--- 150
Query: 85 AAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYAL 144
A + + V V E+SS+Q+E + F PT S VLNLT DHL RH TM+NYA+
Sbjct: 151 -AIEAVEMAGDGA---VLVTELSSFQLESID-MFSPTASTVLNLTEDHLNRHHTMENYAM 205
Query: 145 TKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFP----GVKIDTEAK-TASF 199
K +F + ++ + +L + + +G ++ + G+ +D + +
Sbjct: 206 AKARIFENQIDDTVCILNYDDLTTRSMAEGCHADVVFFSRKDKFERGIYLDDDNNIIVNN 265
Query: 200 EVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRM 259
E+ + + L+ + + G HN N +AA+ L L +GV++E L ++ + HR+
Sbjct: 266 EIEEIAL---LKADELSLPGGHNLEN-CMAAIG-LTLALGVEIEVLVKVLKTFKAVEHRL 320
Query: 260 QIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
+ V ++GV +V+DSK TN ++T + K +++ GG K
Sbjct: 321 EYVDT-VKGVKYVNDSKGTNPDSTIKAVQSYK-DPIILIAGGYDK 363
>gi|397665206|ref|YP_006506744.1| UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase [Legionella
pneumophila subsp. pneumophila]
gi|395128617|emb|CCD06835.1| UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase [Legionella
pneumophila subsp. pneumophila]
Length = 447
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 147/309 (47%), Gaps = 53/309 (17%)
Query: 23 QSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPL 82
Q G + +++ A+ I S ++A+TGTNGKSTV T VG+M G V GN+G P+
Sbjct: 87 QLGASIYGDIECLAREI--SAPVIAITGTNGKSTVTTLVGEMAKAAGFRVAVAGNIGTPV 144
Query: 83 SEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNY 142
+ + + + + V+E+SS+Q+++ P V+ +LN+TPDHL+RH TM+ Y
Sbjct: 145 -------LDMLDDEHHYDLWVLELSSFQLDL-TYSLSPVVATILNVTPDHLDRHHTMEAY 196
Query: 143 ALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASF--E 200
K ++ K FN + P + K SF +
Sbjct: 197 TQAKHRIY-------------------RGAKAVLFNREDVYTVPHQSCQADIKCISFGKD 237
Query: 201 VPAV---GVVSQ-------------LQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEA 244
PA+ G++ Q L + ++ + G HN+ NA A G+ ++
Sbjct: 238 APAMGNWGLIEQENTTYLAKGMERLLPVESILIKGVHNWMNALAACALA--EAAGISMQH 295
Query: 245 LNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGH---KCVILLGG 301
+ + ++ PHR Q V R++ GV W++DSK TN+ AT + + + G K V++ GG
Sbjct: 296 ILNVLKTFPGLPHRCQWV-REVDGVGWINDSKGTNIGATISAINGIGGSMQGKIVLIAGG 354
Query: 302 QAKVLNGQE 310
Q K + QE
Sbjct: 355 QGKGADFQE 363
>gi|159903953|ref|YP_001551297.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
[Prochlorococcus marinus str. MIT 9211]
gi|159889129|gb|ABX09343.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Prochlorococcus
marinus str. MIT 9211]
Length = 457
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 152/317 (47%), Gaps = 28/317 (8%)
Query: 18 LACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGN 77
L L G + SE+ A + + + I + VTGTNGK+TV + +LN I +GGN
Sbjct: 81 LNALRNKGIEIESEISLAWKAL-KHIPWIGVTGTNGKTTVTHMLHHVLNSNQINTAMGGN 139
Query: 78 LGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEI-PNKYFCPTVSVVLNLTPDHLERH 136
+G P S+ A I ++P + V+E+SSYQ+E PN P + + LTPDHLERH
Sbjct: 140 VGIPASQIALDSIRSSRTEPNW--LVMELSSYQLETSPN--ISPKIGIWTTLTPDHLERH 195
Query: 137 KTMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKT 196
+++NY+ K L N+ + + + L A + W+ G I+
Sbjct: 196 GSLENYSDIKKRLLE---NSSIRIYNLDDHFLKNA-RSKLMEGIWVST-NGAAINN--NQ 248
Query: 197 ASFEVPAVGVVSQ-----LQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEI 251
A F + + G + + L + + GRHN N + ++ +IG+ + I
Sbjct: 249 ADFWITSKGKLYEKGEEILDTTLLNIPGRHNLQN--LLLVTAAAREIGLSPRDIEQAIAS 306
Query: 252 LRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQES 311
+ PHR++ + +I+G+ +DSKATN EA GL + +++ GGQ+K N +
Sbjct: 307 FKGVPHRLEKI-ANIKGIEIFNDSKATNYEAAKIGLEAVPS-PTIVIAGGQSKKGNPND- 363
Query: 312 NGFEKLIEPLNHHRCVI 328
++ LN C +
Sbjct: 364 -----WLQALNKKACAV 375
>gi|206889487|ref|YP_002249134.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase
[Thermodesulfovibrio yellowstonii DSM 11347]
gi|206741425|gb|ACI20482.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase
[Thermodesulfovibrio yellowstonii DSM 11347]
Length = 482
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 152/313 (48%), Gaps = 29/313 (9%)
Query: 13 LKATGLACLLQSGKRVMSELDFAAQV---IPRSIKILAVTGTNGKSTVVTFVGQMLNHLG 69
L + + G V+ E++ + Q+ I ++KI+ +TG NGKST T + L G
Sbjct: 88 LSTPSIVSAVYKGIPVIGEIELSWQILSLIKENVKIIGITGANGKSTTSTLTYEFLKRDG 147
Query: 70 IEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLT 129
+ + GN+G P++E + L + + + V+E+SS+Q+E K F P + +LN+T
Sbjct: 148 KKVQLAGNIGYPMAEV---VLKLLNKEIDMEYLVLELSSFQLE-GIKTFKPDFAAILNIT 203
Query: 130 PDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAI---------KG---HRF 177
PDH++R+ MK Y K +F + +L +++ AI KG H F
Sbjct: 204 PDHMDRYSDMKEYIEAKAKIFQNQNGDDYLILNMDDENTISAIEYLRNVYLKKGKLPHVF 263
Query: 178 NLAWIGAFPGVKIDTEA------KTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAAL 231
+ + G + ++ + S ++ + L + K+ G HN N + A
Sbjct: 264 YFSRVQNVYGAYLKNDSIYFNAREEVSDDIKKEMENTVLSVSTFKIKGIHNVEN--IMAA 321
Query: 232 SVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLK 291
S+L L G +++ ++ PHRM+ V R+I GV +++DSK TN++A L
Sbjct: 322 SLLALCSGCKGQSIKDVVQQFPGLPHRMEPV-REIDGVIYINDSKGTNVDAVKKSLESFP 380
Query: 292 GHKCVILLGGQAK 304
G+ +++ GG+ K
Sbjct: 381 GN-VILIAGGRDK 392
>gi|374312764|ref|YP_005059194.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Granulicella
mallensis MP5ACTX8]
gi|358754774|gb|AEU38164.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Granulicella
mallensis MP5ACTX8]
Length = 450
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 141/285 (49%), Gaps = 21/285 (7%)
Query: 25 GKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSE 84
G ++ EL+ AQ + +++ +TG+NGK+T T +G++ G VGGN+G P++E
Sbjct: 91 GMHIIGELELGAQFL--QGEVVGITGSNGKTTTTTLMGEIFKAAGRPTLVGGNIGKPVTE 148
Query: 85 AAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYAL 144
+ S P+ +V+EVSS+Q+E F P +++VLN+TPDHL+RH +NYA
Sbjct: 149 ------LVGESTPE-AWSVLEVSSFQLETVES-FRPRIAMVLNITPDHLDRHGNFENYAA 200
Query: 145 TKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTAS-FEVPA 203
K + +L ++ + + W VK + F P+
Sbjct: 201 AKARITEFQTAEDFLILNAEDKPTQMVAAKTKAQIYWFSPRRQVKQGAFVHGETIFFTPS 260
Query: 204 VGVVSQ--LQLHNMKVMGRHNYHN--AAVAALSVLGLDIGVDVEALNSTIEILRTPPHRM 259
G + + + + + G HN N AAV A + GV E + + + + HR+
Sbjct: 261 EGAKPEPVMPVAEIPLAGAHNVENVLAAVCAARL----AGVASETIRAAVAAFKAVEHRL 316
Query: 260 QIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
+ V R+ GV + +DSKATN++AT + G + ++LGG+ K
Sbjct: 317 EFV-REHNGVRYYNDSKATNVDATVKAVEAFAG-RIYLILGGKDK 359
>gi|258404872|ref|YP_003197614.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Desulfohalobium
retbaense DSM 5692]
gi|257797099|gb|ACV68036.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Desulfohalobium
retbaense DSM 5692]
Length = 444
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 90/278 (32%), Positives = 134/278 (48%), Gaps = 38/278 (13%)
Query: 27 RVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAA 86
+++SEL+ A+ + + I+AVTG+ GK+T T + +L G F GGNLG PLSE
Sbjct: 99 QIISELELASWFV--NEPIVAVTGSAGKTTTTTLIAHILETAGRRVFSGGNLGTPLSEYV 156
Query: 87 FHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTK 146
++ + V V+EVSS+Q+ + F P V+V+LN+ P+HL+ H+ M+ Y L K
Sbjct: 157 L-------AQDQADVLVLEVSSFQL-VHASSFHPKVAVLLNVAPNHLDYHEEMEAYVLAK 208
Query: 147 CHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGV 206
LF+ L + P+ L E ++ F+ A F F P
Sbjct: 209 LKLFAKQQPGDLAIAPYA---LKEDLESRHFSAADRVYF--------VPNDRFSCP---- 253
Query: 207 VSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDI 266
++ G HN N A L+ L GVD +A+ + + HR+QIV
Sbjct: 254 ---------QLPGEHNQANIEAAYLACRYL--GVDEQAVAEALASYQPQAHRLQIVGT-W 301
Query: 267 QGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
GV VDDSKAT +E+ L + V+L GGQ K
Sbjct: 302 NGVKVVDDSKATTIESLQAALRSFE-EPIVLLAGGQFK 338
>gi|340779136|ref|ZP_08699079.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Acetobacter
aceti NBRC 14818]
Length = 464
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 97/292 (33%), Positives = 142/292 (48%), Gaps = 32/292 (10%)
Query: 24 SGKRVMSELDFAAQVIPRS---IKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
+G ++S+ D Q + +S + +TGTNGKST + +L H G+ GGNLG
Sbjct: 100 AGVPILSDADLLFQAVRKSGSKARFAGITGTNGKSTTTALLAHLLRHAGLPVAEGGNLG- 158
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQME-IPNKYFCPTVSVVLNLTPDHLERHKTM 139
P S ++LP P V V+E+SSY +E + +F + +LNLTPDHL+RH M
Sbjct: 159 PAS------LSLPL-LPDNGVYVLEMSSYMLERLATLHF--DTACLLNLTPDHLDRHGDM 209
Query: 140 KNYALTKCHLFSHMVNTKLGLLPFGN---QHLNEAIKGHRFNLAWIGAFPGVKIDTEAKT 196
YA K H+F M + L ++ G+ + + ++K + I + +T
Sbjct: 210 AGYAAAKAHIFDRMTGSDLAVIGNGDAWCRDIAASVKARDIPVETISG-------QDDET 262
Query: 197 ASFEVPAVGVVSQ---LQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILR 253
A F + VVS + + G HN N A AAL+ + L +GV +L S I
Sbjct: 263 ADFHLHEGAVVSHGMVIARPGKTLPGTHNAEN-ACAALA-MALRLGVASSSLASGIGDFA 320
Query: 254 TPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKV 305
HR + V DI GV +VDDSKATN +A L + V + GG AK
Sbjct: 321 GLAHRQKHV-ADINGVAYVDDSKATNADAASRALGCYS--RIVWIAGGVAKA 369
>gi|357633649|ref|ZP_09131527.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Desulfovibrio sp.
FW1012B]
gi|357582203|gb|EHJ47536.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Desulfovibrio sp.
FW1012B]
Length = 442
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 130/277 (46%), Gaps = 38/277 (13%)
Query: 25 GKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSE 84
G +V+SEL+ A+ + I+AVTG+NGK+T V + +L G + F GGN+G PLSE
Sbjct: 99 GAQVVSELELASWFT--AEPIVAVTGSNGKTTTVMLISHLLEAAGRKVFTGGNIGTPLSE 156
Query: 85 AAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYAL 144
+ P V V+EVSS+Q+++ + F P V V+LN +P+HL+ H + Y
Sbjct: 157 YVL------AGDPA-DVVVLEVSSFQLQL-VRTFRPRVGVLLNFSPNHLDWHADLDEYLD 208
Query: 145 TKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAV 204
K +LF L L+P + L E + G + + F A + F P
Sbjct: 209 AKLNLFKAQRPGDLALVP---EELRETLAGRTLSKGEVVWF--------APSGRFHCP-- 255
Query: 205 GVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHR 264
++ G HN N A L+ GV E + E PHR+QI+
Sbjct: 256 -----------RLAGLHNRQNMEAAYLAC--QPFGVTEETAKAAFESFAPAPHRLQIIG- 301
Query: 265 DIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGG 301
+ +GV +VDDSKAT + A L +L GG
Sbjct: 302 EKRGVLFVDDSKATTVAAMEAALKSFD-RPVRLLCGG 337
>gi|227874381|ref|ZP_03992565.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Oribacterium
sinus F0268]
gi|227839789|gb|EEJ50235.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Oribacterium
sinus F0268]
Length = 456
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 141/286 (49%), Gaps = 31/286 (10%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
++ E++ A Q K+ AVTGTNGK+T V+ +G++L + V GN+GNP + A
Sbjct: 94 IIGEIELAYQ--SSKGKLCAVTGTNGKTTTVSLIGEILKSEYSDTHVVGNIGNPFTAEAL 151
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
++ V EVSS+Q+E F P VS + N+TPDHL+RHKTMKNY K
Sbjct: 152 ETEEQSAT-------VCEVSSFQLETIVD-FHPNVSAITNITPDHLDRHKTMKNYIAVKE 203
Query: 148 HLFSHMVNTKLGLLPFGNQHLNEAIKGHRF--NLAWIGAFPGVKIDTEAKTASF------ 199
+ + +L + + L + K + W + K DT+ K + F
Sbjct: 204 SIAENQEEEDSIVLNYMDPELRKFGKKRSLKPKVLWFSSEEEPK-DTKEKESLFLRGDTF 262
Query: 200 ----EVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTP 255
E + + +H ++G+HNY N A +GL +GV ++ + + +
Sbjct: 263 YYKKEDKEEKLFTTKDVH---LLGKHNYENILCAV--GVGLKMGVPMDKIIKVCKKFKPV 317
Query: 256 PHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGG 301
HR++ V R+ GV + +DSK TN++A L + G V+L+GG
Sbjct: 318 EHRIEFV-RERSGVKYYNDSKGTNVDAAIQALRAMPGP--VVLIGG 360
>gi|376296424|ref|YP_005167654.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Desulfovibrio
desulfuricans ND132]
gi|323458985|gb|EGB14850.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Desulfovibrio
desulfuricans ND132]
Length = 434
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 95/286 (33%), Positives = 137/286 (47%), Gaps = 40/286 (13%)
Query: 18 LACLLQS--GKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVG 75
LA +L+ + V+SEL+FA+ I ILAVTG+NGK+T T + ++L G F G
Sbjct: 92 LAPVLEGVPARNVVSELEFASWFI--EAPILAVTGSNGKTTTTTLISEILEKAGRRVFTG 149
Query: 76 GNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLER 135
GN+G PL C L +P ++ V+EVSS+Q++ + F P V + LN + +HL+
Sbjct: 150 GNIGVPL------CEYLLDMEPA-EIIVLEVSSFQLQNCLR-FKPHVGLFLNFSANHLDY 201
Query: 136 HKTMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAK 195
H + Y K HLFS M + LL ++ L+ + G F A I F
Sbjct: 202 HADLDEYLDAKLHLFSRMGPEDIALL---HESLHPLLDGRSFTEAHIEWF--------GP 250
Query: 196 TASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTP 255
T FE P ++G HN N A +V GV E I R
Sbjct: 251 TNRFEAP-------------HLLGEHNRSNVEAAWQAV--KRFGVSEEQAAEAIRDFRPL 295
Query: 256 PHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGG 301
PHR++ V + GV +V+DSKAT L+A + + IL+GG
Sbjct: 296 PHRIEPVA-ERNGVLYVNDSKATTLDAAEAAVHAFE-RPVRILMGG 339
>gi|363898946|ref|ZP_09325457.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Oribacterium sp.
ACB1]
gi|361959276|gb|EHL12563.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Oribacterium sp.
ACB1]
Length = 454
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 86/280 (30%), Positives = 143/280 (51%), Gaps = 24/280 (8%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V+ E++ A Q + K+ AVTGTNGK+T V+ +G++L + V GN+GNP + A
Sbjct: 97 VIGEIELAYQSLKG--KLCAVTGTNGKTTTVSLIGEILKSQYADTHVVGNIGNPFTAEAL 154
Query: 88 HCIALPSSKPKFQVAVVEVSSYQME-IPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTK 146
++ V EVSS+Q+E I + F P VS + N+TPDHL+RHKTMKNY K
Sbjct: 155 DTEEQSAT-------VCEVSSFQLESIVD--FRPHVSAITNITPDHLDRHKTMKNYIAVK 205
Query: 147 CHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLA----WIGAFPGVKIDTEAKTASFEVP 202
+ + +L + + L + G + NL W + K + F
Sbjct: 206 ESISINQTEEDSIVLNYMDPELRKF--GKKRNLKPKVLWFSSEEEPKEGFFLRDDEFIYK 263
Query: 203 AVGVVSQL-QLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQI 261
+ +L + +++++G+HNY N + + L +GV ++ + + + HR++
Sbjct: 264 SKDKEEKLFKTKDVQLLGKHNYEN--IMCSMAVALKMGVPMDKIIKVCKKFKPVEHRIEF 321
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGG 301
V R+ GV + +DSK TN++A L + G V+L+GG
Sbjct: 322 V-RERSGVRYYNDSKGTNVDAAIQALRAMPGP--VLLIGG 358
>gi|383785028|ref|YP_005469598.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Leptospirillum
ferrooxidans C2-3]
gi|383083941|dbj|BAM07468.1| putative UDP-N-acetylmuramoylalanine-D-glutamate ligase
[Leptospirillum ferrooxidans C2-3]
Length = 535
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 103/320 (32%), Positives = 148/320 (46%), Gaps = 52/320 (16%)
Query: 14 KATGLACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAF 73
K +GLA + + RV+ EL++A+ + P +LAV GTNGKST L G+ F
Sbjct: 102 KWSGLA-VPEYDSRVIGELEWASALSP--FPLLAVGGTNGKSTTSALAAHFLRACGLSVF 158
Query: 74 VGGNLGNPLSEAAF---HCIALPSSKPKFQVAVVEVSSYQMEIPN---KYFCPTVSVVLN 127
+GGN G PLSEA IA S P++ VVE+SS+Q E + +F P V + LN
Sbjct: 159 LGGNFGTPLSEAVLSERKRIAQELS-PEYDAGVVEISSFQAETMSPVRSWFDPVVHLFLN 217
Query: 128 LTPDHLERHKTMKNYALTKCHLF-----SHMV----NTKLGLLPFGNQHLNEAI-----K 173
+TPDHL+RH + + Y K F SH + + GL P A K
Sbjct: 218 ITPDHLDRHPSEEAYRRAKWQSFRGISPSHFTVFNGDPESGLYPLRKTPGRPAFFFASRK 277
Query: 174 GHRFNL----------------AWIGAFPGVKIDTEA-KTASFEVPAVGVVSQLQLHNMK 216
G L + FPG K +TE + F +P +G L
Sbjct: 278 GASPELPVEEAPVFLLSEDGKTGRVSGFPGQKGETEIWQLDGFSLPGLGNRQNLA---AS 334
Query: 217 VMGRHNYHNAAVAALSVLGLDIG----VDVEALNSTIEILRTPPHRMQIVHRDIQGVTWV 272
++G + N V G D G + L ++ R PHRM+++ + G+ ++
Sbjct: 335 LLGTLIFLNEQRKIGKVRGQDSGDMPFPEKTLLLESLSGFRGLPHRMEVIA-EKNGICFI 393
Query: 273 DDSKATNLEATCTGLMDLKG 292
+DSKATN++AT LM LKG
Sbjct: 394 NDSKATNVDAT---LMALKG 410
>gi|433655384|ref|YP_007299092.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase
[Thermoanaerobacterium thermosaccharolyticum M0795]
gi|433293573|gb|AGB19395.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase
[Thermoanaerobacterium thermosaccharolyticum M0795]
Length = 454
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 149/293 (50%), Gaps = 27/293 (9%)
Query: 25 GKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSE 84
G V+ E++FA ++ I A+TGTNGK+T + +G++ + G+ +V GN+G PL E
Sbjct: 92 GIEVIGEVEFAYRL--SKAPIYAITGTNGKTTTTSLLGEIFKNSGVRTYVAGNIGYPLVE 149
Query: 85 AAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYAL 144
AA V V E+SS+Q+E K F P +S ++N+TPDHL RHKT++NY
Sbjct: 150 AAVKA-------GNDDVIVAEISSFQLETI-KEFRPVISAIINITPDHLNRHKTLENYIN 201
Query: 145 TKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAV 204
K +F + + +L + +++++ F A FP + + E +
Sbjct: 202 IKGRIFENQSFNEYTVLNYDDKNMSSL-----FKKAKCKVFPFSRAKVLDQGTYIENGKI 256
Query: 205 GVVSQLQLHNMKVM-------GRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPH 257
V+S N + G HN NA VA S + G+DV +N+T++ + H
Sbjct: 257 -VISLNGEKNTIIDIDDIYIPGNHNVENAMVA--STMAFLAGIDVNTINTTLKTFKGVEH 313
Query: 258 RMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQE 310
R++ V R I GV + +DSK TN +A + +KG +++ GG K ++ E
Sbjct: 314 RIEFV-RSINGVKYYNDSKGTNPDAAIKAIEAMKG-PIILIAGGYDKGVSFDE 364
>gi|118497141|ref|YP_898191.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Francisella
novicida U112]
gi|194323439|ref|ZP_03057216.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Francisella
novicida FTE]
gi|254373970|ref|ZP_04989452.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Francisella
novicida GA99-3548]
gi|385792464|ref|YP_005825440.1| hypothetical protein [Francisella cf. novicida Fx1]
gi|158512419|sp|A0Q5C2.1|MURD_FRATN RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|118423047|gb|ABK89437.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Francisella
novicida U112]
gi|151571690|gb|EDN37344.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Francisella
novicida GA99-3548]
gi|194322294|gb|EDX19775.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Francisella
tularensis subsp. novicida FTE]
gi|328676610|gb|AEB27480.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Francisella cf.
novicida Fx1]
Length = 417
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 139/284 (48%), Gaps = 46/284 (16%)
Query: 27 RVMSELDFAAQVIPRS-IKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEA 85
+++S++D Q I + K +AVTG+NGKSTVVT +L LG ++ + GN+G P
Sbjct: 80 KIVSDIDIFYQYIKDTKAKTIAVTGSNGKSTVVTMTDFVLKDLGYKSILVGNIGTP---- 135
Query: 86 AFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSV--VLNLTPDHLERHKTMKNYA 143
AL KF VVEVSS+Q+++ N C + ++N++PDHL+R++ + Y
Sbjct: 136 -----ALNKIGEKFDYCVVEVSSFQIDLFN---CVRFDLGCIINVSPDHLDRYQNFEQYK 187
Query: 144 LTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPA 203
+KL L F N + H + + G + ++ +
Sbjct: 188 -----------QSKLNLAKFSNDFFVYDV--HNNGIKYAGEYQIIRGAIYRNSTKL---- 230
Query: 204 VGVVSQLQLHNMKVMGRHNYHNAAVA--ALSVLGLDIGVDVEALNSTIEILRTPPHRMQI 261
L + K+ G HN N V L LGLDI +A++S I+ + HR +I
Sbjct: 231 ------LDIAETKLFGEHNLENIIVVLNILDRLGLDIN---QAIDS-IKKFKGLEHRCKI 280
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVI-LLGGQAK 304
V + + G T+++DSK TN+ AT L + K +I LLGG AK
Sbjct: 281 VKK-VNGTTYINDSKGTNVGATIAALNSITNSKNIILLLGGVAK 323
>gi|395209423|ref|ZP_10398517.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Oribacterium
sp. ACB8]
gi|394705054|gb|EJF12583.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Oribacterium
sp. ACB8]
Length = 448
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 86/280 (30%), Positives = 143/280 (51%), Gaps = 24/280 (8%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V+ E++ A Q + K+ AVTGTNGK+T V+ +G++L + V GN+GNP + A
Sbjct: 91 VIGEIELAYQSLKG--KLCAVTGTNGKTTTVSLIGEILKSQYADTHVVGNIGNPFTAEAL 148
Query: 88 HCIALPSSKPKFQVAVVEVSSYQME-IPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTK 146
++ V EVSS+Q+E I + F P VS + N+TPDHL+RHKTMKNY K
Sbjct: 149 DTEEQSAT-------VCEVSSFQLESIVD--FRPHVSAITNITPDHLDRHKTMKNYIAVK 199
Query: 147 CHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLA----WIGAFPGVKIDTEAKTASFEVP 202
+ + +L + + L + G + NL W + K + F
Sbjct: 200 ESISINQTEEDSIVLNYMDPELRKF--GKKRNLKPKVLWFSSEEEPKEGFFLRDDEFIYK 257
Query: 203 AVGVVSQL-QLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQI 261
+ +L + +++++G+HNY N + + L +GV ++ + + + HR++
Sbjct: 258 SKDKEEKLFKTKDVQLLGKHNYEN--IMCSMAVALKMGVPMDKIIKVCKKFKPVEHRIEF 315
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGG 301
V R+ GV + +DSK TN++A L + G V+L+GG
Sbjct: 316 V-RERSGVRYYNDSKGTNVDAAIQALRAMPGP--VLLIGG 352
>gi|254372509|ref|ZP_04987998.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Francisella
tularensis subsp. novicida GA99-3549]
gi|151570236|gb|EDN35890.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Francisella
novicida GA99-3549]
Length = 417
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 139/284 (48%), Gaps = 46/284 (16%)
Query: 27 RVMSELDFAAQVIPRS-IKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEA 85
+++S++D Q I + K +AVTG+NGKSTVVT +L LG ++ + GN+G P
Sbjct: 80 KIVSDIDIFYQYIKDTKAKTIAVTGSNGKSTVVTMTDFVLKDLGYKSILVGNIGTP---- 135
Query: 86 AFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSV--VLNLTPDHLERHKTMKNYA 143
AL KF VVEVSS+Q+++ N C + ++N++PDHL+R++ + Y
Sbjct: 136 -----ALNKIGEKFDYCVVEVSSFQIDLFN---CVRFDLGCIINVSPDHLDRYQNFEQYK 187
Query: 144 LTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPA 203
+KL L F N + H + + G + ++ +
Sbjct: 188 -----------QSKLNLAKFSNDFFVYDV--HNNGIKYAGEYQIIRGAIYRNSTKL---- 230
Query: 204 VGVVSQLQLHNMKVMGRHNYHNAAVA--ALSVLGLDIGVDVEALNSTIEILRTPPHRMQI 261
L + K+ G HN N V L LGLDI +A++S I+ + HR +I
Sbjct: 231 ------LDIAETKLFGEHNLENIIVVLNILDRLGLDIN---QAIDS-IKKFKGLEHRCKI 280
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVI-LLGGQAK 304
V + + G T+++DSK TN+ AT L + K +I LLGG AK
Sbjct: 281 VKK-VNGTTYINDSKGTNVGATIAALNSITNSKNIILLLGGVAK 323
>gi|444914629|ref|ZP_21234771.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Cystobacter fuscus
DSM 2262]
gi|444714488|gb|ELW55369.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Cystobacter fuscus
DSM 2262]
Length = 458
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 140/295 (47%), Gaps = 21/295 (7%)
Query: 18 LACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGN 77
L + +G V E++ A++ + + +L +TGTNGKST G++ G FVGGN
Sbjct: 87 LQSVRAAGVPVWGEVELASRFLAH-VPLLGITGTNGKSTTTALTGELFARGGRRTFVGGN 145
Query: 78 LGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK 137
LG PLSEAA S + VVE+SS+Q+E + P S +LNLTPDHL+R+
Sbjct: 146 LGRPLSEAAL-------SPGDWDALVVELSSFQLEGIDT-LRPKGSAILNLTPDHLDRYA 197
Query: 138 TMKNYALTKCHLFSHMVNTKLGLLPFGNQ---HLNEAIKGHRFNLAWIG----AFPGVKI 190
Y K +F + ++ + L EA + + + G + P +
Sbjct: 198 DHAAYGAAKARIFKNQAAGDFAVVNADDADVMRLAEAARVPVYGFSLTGRPVVSAPVLAG 257
Query: 191 DTEAKTASFEVPAVGVVSQ-LQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTI 249
A+ F VG + L N + G HN NA AAL GV E + + +
Sbjct: 258 LAVARPGGFGFTGVGEADESFTLTNRALRGGHNAQNAMAAALLA--RLAGVSHEGVQAGL 315
Query: 250 EILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
+ PHR++ V R + GV WV+DSKATN+++ L +++ GG+ K
Sbjct: 316 DSYPGLPHRLESV-RVLGGVEWVNDSKATNVDSVLVALRAFS-RDVLLIAGGKGK 368
>gi|320106152|ref|YP_004181742.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Terriglobus
saanensis SP1PR4]
gi|319924673|gb|ADV81748.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Terriglobus
saanensis SP1PR4]
Length = 452
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 148/293 (50%), Gaps = 21/293 (7%)
Query: 25 GKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSE 84
G ++ E++ A++ + S+ +A+TG+NGK+T + +G++L G+ VGGN+G P+ E
Sbjct: 92 GVEMIGEVELASRFLNGSV--VAITGSNGKTTTTSLIGEILRGAGVPTLVGGNIGLPVVE 149
Query: 85 AAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYAL 144
+ + +V+E+SS+Q+E + F P ++VVLN+TPDHL+RH T + YA
Sbjct: 150 -------MVAESTDTTWSVLEISSFQLET-VETFAPKIAVVLNITPDHLDRHGTFEKYAE 201
Query: 145 TKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTAS-FEVPA 203
K + +L ++ + + W +K S +P
Sbjct: 202 AKTRITEMQTPADFLVLNAEDKPTQMVAAKTKAQIFWFSPRRPIKQGAFVHGDSILFLPR 261
Query: 204 VGVVSQ--LQLHNMKVMGRHNYHN--AAVAALSVLGLDIGVDVEALNSTIEILRTPPHRM 259
G ++ + + + ++G HN N AAV A + GV E + + + HR+
Sbjct: 262 EGGKAEPVMPVSEIPLVGAHNVENVLAAVCACRL----AGVSSEKIREGVRGFKAVDHRL 317
Query: 260 QIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESN 312
Q V ++ GV + +DSKATN++AT L +G+ +++LGG+ K + E N
Sbjct: 318 QFVA-EVAGVKYYNDSKATNVDATAKALASFEGN-VLLILGGKDKGSDYTELN 368
>gi|344200892|ref|YP_004785218.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Acidithiobacillus
ferrivorans SS3]
gi|343776336|gb|AEM48892.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Acidithiobacillus
ferrivorans SS3]
Length = 448
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/286 (32%), Positives = 143/286 (50%), Gaps = 23/286 (8%)
Query: 23 QSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPL 82
Q+G +M +++ ++ SI +A+TG+NGKSTV T +G+M + G+ A VGGNLG P
Sbjct: 88 QAGIEIMGDIELFGRIARTSI--VAITGSNGKSTVTTLLGEMAHAAGLHAAVGGNLGTPA 145
Query: 83 SEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNY 142
+ LP + P+ ++ V+E+SS+Q+ ++F P + +LNL+PDHL+ H Y
Sbjct: 146 LD------LLPETGPEPELYVLELSSFQLA-SCQHFHPCAAAILNLSPDHLDWHGGYTAY 198
Query: 143 ALTKCHLFSHMVNTKLGLL----PFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTAS 198
K +F M +L PF + G + F G D +A TA
Sbjct: 199 GSAKARIFQAMGAGDTLVLNAEDPFTAALPAQVPAGVQLR------FFGRADDRDAYTAD 252
Query: 199 FEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHR 258
++ L L + + G HN NA AAL +DI + A+ + PHR
Sbjct: 253 DQLCLRTDGPLLALDQLLLRGGHNTENALAAALLARAVDI--PLTAIRQALRNFSGLPHR 310
Query: 259 MQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
+ + ++ GV + DDSK TNL AT + L G V++LGG AK
Sbjct: 311 LAWIA-EVNGVNYYDDSKGTNLGATLKAMSGLPG-PLVMILGGDAK 354
>gi|406939065|gb|EKD72162.1| hypothetical protein ACD_45C00746G0002 [uncultured bacterium]
Length = 443
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 144/290 (49%), Gaps = 32/290 (11%)
Query: 23 QSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPL 82
+ G ++ +++ A+ ++ ++A+TGTN KSTV T VG+M G EA GGNLG P
Sbjct: 87 ERGAHIIGDIELFARAA--TMPVIAITGTNAKSTVTTLVGKMAEAAGFEAQTGGNLGVP- 143
Query: 83 SEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNY 142
+ L P + V+E+SS+Q+E + P V+ VLN+TPDH++R++T+K+Y
Sbjct: 144 ------ALDLLEKNPATNLFVLELSSFQLETTHS-LKPQVATVLNITPDHMDRYETLKHY 196
Query: 143 ALTKCHLFSH----MVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFP-GVKIDTEAKTA 197
K ++ H + N L +A++ F L G G+ +
Sbjct: 197 RQAKLRVYQHCSVAVCNRDDTLTDV------DALRKITFTLQTPGKNEFGLLVKNGKTYL 250
Query: 198 SFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPH 257
+FE ++ L + + ++G+H Y A+A+L++ G G+ + + PH
Sbjct: 251 TFEDQSL-----LAIDELPIVGKH-YQANALASLAI-GYGFGLPFAPMIKVLREFTGLPH 303
Query: 258 RMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGH---KCVILLGGQAK 304
R Q V R+ GV W +DSK TN+ AT + L K +++ GG K
Sbjct: 304 RCQFV-RERDGVRWYNDSKGTNVGATQAAIEGLGSEISGKLILIAGGVGK 352
>gi|347758651|ref|YP_004866213.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Micavibrio
aeruginosavorus ARL-13]
gi|347591169|gb|AEP10211.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Micavibrio
aeruginosavorus ARL-13]
Length = 467
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/278 (35%), Positives = 144/278 (51%), Gaps = 31/278 (11%)
Query: 44 KILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAV 103
K + +TGTNGKST +G +LN G+ A VGGN+G AA I LP PK V V
Sbjct: 115 KTIGITGTNGKSTTTALIGHILNAGGVTASVGGNIG----RAALD-IELP---PKDGVIV 166
Query: 104 VEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPF 163
+E+SSYQ+++ F P + V +NLTPDHL+RH M YA K +F +G+
Sbjct: 167 LELSSYQLDL-CPTFAPDIGVHMNLTPDHLDRHGDMAGYAAAKMRIFRGAGAAIIGVDDE 225
Query: 164 GNQHLNEAIK--GHR--FNLAWIGAFP-GVKIDTEA--KTASFEVPAVGVVSQLQLHNMK 216
++ + + ++ G R + ++ + A GV + E +G VS L
Sbjct: 226 PSRAMFKQVQDTGDRDVYAISVVNAVERGVYVSNGVLFDCMDGEAREIGSVSALT----T 281
Query: 217 VMGRHNYHN--AAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDD 274
+ G HN+ N AA A + GL D + + + I+ PHR Q + R I GV +V+D
Sbjct: 282 LPGVHNHQNICAAYIATRLSGL----DADTIMNAIKTYPGLPHR-QFMTRVINGVAYVND 336
Query: 275 SKATNLEATCTGLMDLKGHKCVILLGGQAKV--LNGQE 310
SKATN +AT L+ + + C I +GG+ K LNG E
Sbjct: 337 SKATNADATAKALVCYR-NICWI-VGGKPKDGGLNGLE 372
>gi|374620460|ref|ZP_09692994.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [gamma
proteobacterium HIMB55]
gi|374303687|gb|EHQ57871.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [gamma
proteobacterium HIMB55]
Length = 453
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 152/306 (49%), Gaps = 38/306 (12%)
Query: 23 QSGKRVMSELD-FAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
Q G + ++D F A+ ++ +TG+NGKSTV TFVGQ+L G+ +GGNLG
Sbjct: 93 QIGVEIRGDIDVFVAET---DKPVIGITGSNGKSTVTTFVGQLLKSCGLHVALGGNLGTG 149
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
AL + + + V+E+SS+Q+E V+ VLNLTPDHL+RHKTM
Sbjct: 150 ---------ALDLLEQEADIYVLELSSFQLERAGDLNL-AVATVLNLTPDHLDRHKTMPL 199
Query: 142 YALTKCHLFSH----MVNTKLGL-LPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKT 196
Y L K +F +VN + L LP G KG AW P ++ +
Sbjct: 200 YHLAKHRIFPGAKHVVVNARDPLTLPVG--------KGDVAWTAWRDDEPDLQQLGIRQI 251
Query: 197 ASFEVPAVGVVSQLQLHNMKVMGRHNYHN--AAVAALSVLGLDIGVDVEALNSTIEILRT 254
A G S ++ ++ V+G N N AA+A GL+ ++ + S L+
Sbjct: 252 EGEPWIAFGFESLIRCADLPVVGEQNTRNVLAALAICRGAGLEFSQLIKGVGS----LQG 307
Query: 255 PPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILL-GGQAKVLNGQESNG 313
PHR + + + GV++++DSKATN+ A + + L K +IL+ GG+AK GQ
Sbjct: 308 LPHRCERIA-ETGGVSFINDSKATNIGAAVSAISGLATGKNIILIAGGEAK---GQSFEA 363
Query: 314 FEKLIE 319
K ++
Sbjct: 364 LSKAVK 369
>gi|385323547|ref|YP_005877986.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase
(UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase;
D-glutamic acid adding enzyme) [Neisseria meningitidis
8013]
gi|261391934|emb|CAX49396.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase
(UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase;
D-glutamic acid adding enzyme) [Neisseria meningitidis
8013]
Length = 445
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 144/291 (49%), Gaps = 34/291 (11%)
Query: 23 QSGKRVMSELDFAAQVI-PRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
Q+G RV+ +++ A ++ R K++A+TG+NGK+TV + VG + G++ + GN+G P
Sbjct: 89 QNGGRVLGDIELLADIVNRRGDKVIAITGSNGKTTVTSLVGYLCIKCGLDTVIAGNIGTP 148
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
+ EA + K V V+E+SS+Q+E + PT + VLN++ DHL+R+ + +
Sbjct: 149 VLEAEWQ-----REGKKADVWVLELSSFQLE-NTESLRPTAATVLNISEDHLDRYDDLLD 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLN------EAIKGHRFNLAWIGAFPGVKIDTEAK 195
YA TK +F G Q LN A+K + W E +
Sbjct: 203 YAHTKAKIFRGD----------GVQVLNSDDVFCRAMKRAGREVKWFSLEHEADFWLERE 252
Query: 196 TASFEVPAVGVVSQLQLHNMKVMGRHNYHN--AAVAALSVLGLDIGVDVEALNSTIEILR 253
T + G + ++ + G HN N AAVA +GL EAL ++ +
Sbjct: 253 TGRLK---QGNEDLIATQDIPLQGLHNATNVMAAVALCEAVGL----PREALLEHVKTFQ 305
Query: 254 TPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
PHR++ + + GV ++DDSK TN+ AT + L+ + ++LGG K
Sbjct: 306 GLPHRVEKIGKK-NGVVFIDDSKGTNVGATAAAITGLQ-NPLFVILGGMGK 354
>gi|329895277|ref|ZP_08270919.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [gamma
proteobacterium IMCC3088]
gi|328922399|gb|EGG29742.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [gamma
proteobacterium IMCC3088]
Length = 452
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/301 (30%), Positives = 147/301 (48%), Gaps = 27/301 (8%)
Query: 24 SGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLS 83
SG V+ +LD + ++ +TG+NGKSTV T VG+ML G+ A VGGNL S
Sbjct: 98 SGASVLGDLDLFMEAA--KAPVIGITGSNGKSTVTTLVGEMLAKAGLRAAVGGNL----S 151
Query: 84 EAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYA 143
AA + +V V+E+SS+Q+E N V+VVLN+T DH++ H +M Y
Sbjct: 152 PAALAIL-----DDDIEVYVLEMSSFQLERSNALGL-DVAVVLNVTADHIDHHGSMAAYH 205
Query: 144 LTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPA 203
K +F ++ + L + + + GA D E K + +
Sbjct: 206 AAKHRIF----RKAKAVVVNDDDVLTQPLVDSTVQVTRYGA--KAHRDAEFKLLN-DALW 258
Query: 204 VGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVH 263
+GV + + M + GRHN+ NA VA D+ EA+ +T+ PHR ++V
Sbjct: 259 MGVSKIIDVSEMALRGRHNHLNALVACAIAACFDVAA--EAMAATLRTFSGLPHRCRVVQ 316
Query: 264 RDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPLNH 323
I GVT+++DSKATN+ A + + + ++LL G + GQ+ F L+ +N
Sbjct: 317 T-IAGVTYINDSKATNVGAALAAIEGIGPNSDLVLLAG--GLGKGQD---FSALVPAINR 370
Query: 324 H 324
+
Sbjct: 371 Y 371
>gi|388457443|ref|ZP_10139738.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Fluoribacter
dumoffii Tex-KL]
Length = 443
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 147/304 (48%), Gaps = 58/304 (19%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
++A+TGTNGKSTV T VG+M G + V GN+G P+ + + ++ + V+
Sbjct: 107 VIAITGTNGKSTVTTLVGEMAKAAGFKVAVAGNIGTPVLDMLY-------DGHQYDLWVL 159
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFG 164
E+SS+Q+++ P + +LN++PDHL+RH TM+ Y K ++ H L
Sbjct: 160 ELSSFQLDL-TYSLAPIAATILNVSPDHLDRHHTMEAYIQAKQRIY-HQAQVAL------ 211
Query: 165 NQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPA---VGVVSQ------------ 209
FN P ++D+ + A +VPA G+++Q
Sbjct: 212 ------------FNREDADTIPTTEVDSISFGA--DVPAGNNWGLITQEDKIYLAKGDAC 257
Query: 210 -LQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQG 268
L + ++ + G HN+ NA A S L G+ + + + + PHR Q V R + G
Sbjct: 258 ILPVDSVLIKGVHNWLNALAA--SALVDAAGISHQHIKNVLTSFTGLPHRCQWV-RTLDG 314
Query: 269 VTWVDDSKATNLEATCTGLMDLKGH---KCVILLGGQAKVLNGQESNGFEKLIEPLNHH- 324
V W++DSK TN+ AT + + + G K V++ GGQ K + F +L +P+ +
Sbjct: 315 VDWINDSKGTNIGATISAINGIGGSMQGKIVLIAGGQGKGAD------FSELSQPIAEYV 368
Query: 325 RCVI 328
R +I
Sbjct: 369 RSII 372
>gi|302344210|ref|YP_003808739.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Desulfarculus
baarsii DSM 2075]
gi|301640823|gb|ADK86145.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Desulfarculus
baarsii DSM 2075]
Length = 446
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/303 (31%), Positives = 146/303 (48%), Gaps = 45/303 (14%)
Query: 18 LACLLQSGKRVMSELDFAAQVI-PRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGG 76
+A ++G V+ E++ + + P ++ I TGTNGKSTV + + ML G+ AF GG
Sbjct: 82 VAAAARNGAEVIGEMELGFRFLRPPAVMI---TGTNGKSTVTSLIAAMLEAEGLRAFAGG 138
Query: 77 NLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERH 136
NLG PL C + ++ AV+EVSS+Q + P V V+LN+T DHL+R+
Sbjct: 139 NLGTPL------CAYVAGAQDD-DWAVLEVSSFQTDTAVS-LRPKVGVILNITDDHLDRY 190
Query: 137 KTMKNYALTKCHLFSHM--------------VNTKLGLLPFGNQHLNEAIKGHRFNLAWI 182
+ + YA +K L ++ V +LGL P + L A HR
Sbjct: 191 DSFEQYAQSKFRLLANQAEGDVAVLCADDPEVAARLGLAP-ASVWLYGAANDHR------ 243
Query: 183 GAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDV 242
PG ++ E + + E+P ++ +L ++ G N N + A + GV
Sbjct: 244 ---PGGRL--ENQRLALELPGRRLI-KLDASRSRLWGGFNKLN--ILAAGLAAAACGVSA 295
Query: 243 EALNSTIEILRTPPHRMQIV-HRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGG 301
+A+ I+ + HR+ +V RD GV W DDSK TN+ A L L V+LLGG
Sbjct: 296 QAMQRAIDEFQPLGHRLALVAERD--GVAWYDDSKGTNVGAVQAALEAL-ARPAVLLLGG 352
Query: 302 QAK 304
+ K
Sbjct: 353 RDK 355
>gi|343500667|ref|ZP_08738557.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Vibrio
tubiashii ATCC 19109]
gi|418477397|ref|ZP_13046530.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Vibrio
tubiashii NCIMB 1337 = ATCC 19106]
gi|342820029|gb|EGU54860.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Vibrio
tubiashii ATCC 19109]
gi|384575137|gb|EIF05591.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Vibrio
tubiashii NCIMB 1337 = ATCC 19106]
Length = 440
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 108/352 (30%), Positives = 171/352 (48%), Gaps = 69/352 (19%)
Query: 5 WLFLLEFQLKATGLACLLQSGKRVMS---------ELDFAAQVIPRSIKILAVTGTNGKS 55
WL + + G+A L ++V++ EL FA QV + ++A+TG+NGKS
Sbjct: 67 WLMAADLVVTNPGIALALPEIEQVINAKILVVGDIEL-FAWQV---NKPVIAITGSNGKS 122
Query: 56 TVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPN 115
TV + GQ+ G++ VGGN+G P AL + + V+E+SS+Q+E +
Sbjct: 123 TVTDWTGQVAQATGLKVGVGGNIGVP---------ALDLLRQDADLYVLELSSFQLETTS 173
Query: 116 KYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSH----MVNTK---------LGLLP 162
P + LNL+ DH++R++ M++Y K +F+H +VN L+
Sbjct: 174 S-LAPRAAAFLNLSEDHMDRYQGMEDYRQAKLRIFNHASACIVNADDRATYPEQASNLVE 232
Query: 163 FGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHN 222
F LN+A RF+L + ID + AS ++ ++GRHN
Sbjct: 233 F---SLNQAT---RFSLLEHEKTEYLAIDGKPICAS--------------SDLSLVGRHN 272
Query: 223 YHNAAV--AALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNL 280
NA V A L+ G+D+ + AL S + HR Q+V D QGV WV+DSKATN+
Sbjct: 273 VANALVVLALLTEAGVDVAKGLSALKSYNGL----THRCQVV-ADNQGVKWVNDSKATNV 327
Query: 281 EATCTGL--MDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPLNHHRCVITE 330
+T L ++L+G K +L+GG K G + + +++ LN C E
Sbjct: 328 ASTMAALAGLELEG-KLYLLVGGVGK---GADFSELAPILKSLNVQLCCFGE 375
>gi|421554230|ref|ZP_16000178.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis 98008]
gi|402333500|gb|EJU68803.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis 98008]
Length = 445
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 144/291 (49%), Gaps = 34/291 (11%)
Query: 23 QSGKRVMSELDFAAQVI-PRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
Q+G RV+ +++ A ++ R K++A+TG+NGK+TV + VG + G++ + GN+G P
Sbjct: 89 QNGGRVLGDIELLADIVNRRGDKVIAITGSNGKTTVTSLVGYLCIKCGLDTVIAGNIGAP 148
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
+ EA + K V V+E+SS+Q+E + PT + VLN++ DHL+R+ + +
Sbjct: 149 VLEAEWQ-----REGKKADVWVLELSSFQLE-NTESLRPTAATVLNISEDHLDRYDDLLD 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLN------EAIKGHRFNLAWIGAFPGVKIDTEAK 195
YA TK +F G Q LN A+K + W E +
Sbjct: 203 YAHTKAKIFRGD----------GVQVLNSDDVFCRAMKRAGREVKWFSLEHEADFWLERE 252
Query: 196 TASFEVPAVGVVSQLQLHNMKVMGRHNYHN--AAVAALSVLGLDIGVDVEALNSTIEILR 253
T + G + ++ + G HN N AAVA +GL EAL ++ +
Sbjct: 253 TGRLK---QGNEDLIATQDIPLQGLHNATNVMAAVALCEAVGL----PREALLEHVKTFQ 305
Query: 254 TPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
PHR++ + + GV ++DDSK TN+ AT + L+ + ++LGG K
Sbjct: 306 GLPHRVEKIGKK-NGVVFIDDSKGTNVGATAAAIAGLQ-NPLFVILGGMGK 354
>gi|386393822|ref|ZP_10078603.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Desulfovibrio sp.
U5L]
gi|385734700|gb|EIG54898.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Desulfovibrio sp.
U5L]
Length = 442
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 130/280 (46%), Gaps = 44/280 (15%)
Query: 25 GKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSE 84
G +V+SEL+ A+ + I+AVTG+NGK+T V + +L G + F GGN+G PLSE
Sbjct: 99 GAQVVSELELASWFT--AEPIVAVTGSNGKTTTVMLISHLLEAAGRKVFTGGNIGTPLSE 156
Query: 85 AAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYAL 144
+ P V V+EVSS+Q+++ + F P V V+LN +P+HL+ H ++ Y
Sbjct: 157 YVL------AGDPA-DVVVLEVSSFQLQL-VRTFRPRVGVLLNFSPNHLDWHADLEEYLS 208
Query: 145 TKCHLFSHMVNTKLGLLPFGNQHLNEAIKGH---RFNLAWIGAFPGVKIDTEAKTASFEV 201
K +LF L L+P + L + G R + W A + F
Sbjct: 209 AKLNLFRAQRPGDLALVP---EELRGLLSGRTLSRGEVVWF-----------APSGRFHC 254
Query: 202 PAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQI 261
P ++ G HN N A L+ GV E + E PHR+QI
Sbjct: 255 P-------------RLAGLHNRQNMEAAFLAA--QPFGVTEEMAKAAFESFAPAPHRLQI 299
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGG 301
+ + +GV +VDDSKAT + A L +L GG
Sbjct: 300 IG-EKRGVLFVDDSKATTVAAMEAALKSFD-RPVRLLCGG 337
>gi|385338637|ref|YP_005892510.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase
(UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase;
D-glutamic acid adding enzyme) [Neisseria meningitidis
WUE 2594]
gi|421558390|ref|ZP_16004272.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis 92045]
gi|433474901|ref|ZP_20432246.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis 88050]
gi|433514929|ref|ZP_20471704.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis 2004090]
gi|433517009|ref|ZP_20473760.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis 96023]
gi|433523294|ref|ZP_20479963.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis 97020]
gi|433528870|ref|ZP_20485477.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis NM3652]
gi|433529680|ref|ZP_20486276.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis NM3642]
gi|433531792|ref|ZP_20488360.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis 2007056]
gi|433533887|ref|ZP_20490435.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis 2001212]
gi|319411051|emb|CBY91451.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase
(UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase;
D-glutamic acid adding enzyme) [Neisseria meningitidis
WUE 2594]
gi|402338210|gb|EJU73447.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis 92045]
gi|432212058|gb|ELK68001.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis 88050]
gi|432255083|gb|ELL10414.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis 96023]
gi|432255989|gb|ELL11315.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis 2004090]
gi|432261640|gb|ELL16886.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis 97020]
gi|432263974|gb|ELL19184.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis NM3652]
gi|432268975|gb|ELL24139.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis NM3642]
gi|432269271|gb|ELL24433.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis 2007056]
gi|432273131|gb|ELL28230.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis 2001212]
Length = 445
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 144/289 (49%), Gaps = 30/289 (10%)
Query: 23 QSGKRVMSELDFAAQVI-PRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
Q+G RV+ +++ A ++ R K++A+TG+NGK+TV + VG + G++ + GN+G P
Sbjct: 89 QNGGRVLGDIELLADIVNRRGDKVIAITGSNGKTTVTSLVGYLCIKCGLDTVIAGNIGTP 148
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
+ EA + K V V+E+SS+Q+E + PT + VLN++ DHL+R+ + +
Sbjct: 149 VLEAEWQ-----REGKKADVWVLELSSFQLE-NTESLRPTAATVLNISEDHLDRYDDLLD 202
Query: 142 YALTKCHLFS----HMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTA 197
YA TK +F ++N + A+K + W E +T
Sbjct: 203 YAHTKAKIFRGDGVQVLNA--------DDAFCRAMKRAGREVKWFSLEYEADFWLERETG 254
Query: 198 SFEVPAVGVVSQLQLHNMKVMGRHNYHN--AAVAALSVLGLDIGVDVEALNSTIEILRTP 255
+ G + ++ + G HN N AAVA +GL EAL ++ +
Sbjct: 255 RLK---QGNEDLIATQDIPLQGLHNATNVMAAVALCEAVGL----PREALLEHVKTFQGL 307
Query: 256 PHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
PHR++ + + GV ++DDSK TN+ AT + L+ + ++LGG K
Sbjct: 308 PHRVEKIG-EKNGVVFIDDSKGTNVGATAAAIAGLQ-NPLFVILGGMGK 354
>gi|336323929|ref|YP_004603896.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Flexistipes
sinusarabici DSM 4947]
gi|336107510|gb|AEI15328.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Flexistipes
sinusarabici DSM 4947]
Length = 422
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/301 (30%), Positives = 149/301 (49%), Gaps = 55/301 (18%)
Query: 27 RVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAA 86
+V SE++ A + +P KI+ VTGTNGKST+ Q+L +G +A GN+G S+ A
Sbjct: 68 KVTSEVEIAYENLPSEAKIVGVTGTNGKSTITYLTWQILQQMGADAVYCGNIGRTFSKVA 127
Query: 87 FHCIALPSSKPKFQVAVVEVSSYQMEIPNKY----FCPTVSVVLNLTPDHLERHKTMKNY 142
+ + VVE+SSYQ+++ + FC + N+TPDHL+R++ +KNY
Sbjct: 128 IE--------GDYDIYVVELSSYQIDLLKNFRMDAFC-----ICNVTPDHLDRYRDIKNY 174
Query: 143 ALTKCHLFSHMVNTKLGLLP---FGNQHLNEAIKGHRFNLAWIGAFPGVKIDT------E 193
A +K + + LL F N ++++++ F + FP +K D
Sbjct: 175 AASKLAALKFVKAKRSYLLDSPVFENFNISKSV---NFIDPEMKKFPVIKNDILDFGRFY 231
Query: 194 AKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVA---ALSVLGLDIGVDVEALNSTIE 250
A T S+ + G HN N A A A V GL DV A+ S+++
Sbjct: 232 ADTRSYPLS----------------GWHNLLNLAFAMCLADEVYGLQ--GDVSAIVSSLQ 273
Query: 251 ILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQE 310
L HR + +GV +++DSK+TN E+T T L L G+ ++L+GG+ K + E
Sbjct: 274 SLE---HRCEKFAES-KGVQYINDSKSTNPESTITALNALSGN-VILLMGGRIKNADYSE 328
Query: 311 S 311
+
Sbjct: 329 T 329
>gi|337288495|ref|YP_004627967.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase
[Thermodesulfobacterium sp. OPB45]
gi|334902233|gb|AEH23039.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase
[Thermodesulfobacterium geofontis OPF15]
Length = 467
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/283 (31%), Positives = 140/283 (49%), Gaps = 19/283 (6%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V+SEL+ A Q + + +A+TGTNGK+T V ++L G + F GGN G PLSE
Sbjct: 94 VLSELEIAWQFLKNKEETIAITGTNGKTTTTAMVSELLKLSGYKVFTGGNYGIPLSELVV 153
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDHLERHKTMKNYALTK 146
+ + V+EVSS+Q+E N Y F P V ++LN++PDHLER+ + + YA K
Sbjct: 154 SNVLVDK-------IVLEVSSFQLE--NIYTFSPKVGILLNISPDHLERYNSYEEYAYYK 204
Query: 147 CHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGV 206
LF +LPF K + + + K K ++ + +
Sbjct: 205 YRLFEFQKEDNYAILPFNEPWFERFGKLIKSRILFFDEKENEKATAYLKLSNISSEDLFI 264
Query: 207 VSQ-----LQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQI 261
++ K++G HN N VA+L L E++ I+ R PHR++
Sbjct: 265 INLGNKEFYSFSGFKLLGIHNKINFMVASLGARLL--SATKESIERLIKEFRGFPHRLEY 322
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
+ + GV +++DSKATN++AT L L G +++LGG+ K
Sbjct: 323 IG-EFGGVYFINDSKATNVDATLQALKSLPG-PIILILGGKHK 363
>gi|418289904|ref|ZP_12902124.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis NM220]
gi|372202584|gb|EHP16376.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis NM220]
Length = 426
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 144/289 (49%), Gaps = 30/289 (10%)
Query: 23 QSGKRVMSELDFAAQVI-PRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
Q+G RV+ +++ A ++ R K++A+TG+NGK+TV + VG + G++ + GN+G P
Sbjct: 70 QNGGRVLGDIELLADIVNRRGDKVIAITGSNGKTTVTSLVGYLCIKCGLDTVIAGNIGTP 129
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
+ EA + K V V+E+SS+Q+E + PT + VLN++ DHL+R+ + +
Sbjct: 130 VLEAEWQ-----REGKKADVWVLELSSFQLE-NTESLRPTAATVLNISEDHLDRYDDLLD 183
Query: 142 YALTKCHLFS----HMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTA 197
YA TK +F ++N + A+K + W E +T
Sbjct: 184 YAHTKAKIFRGDGVQVLNA--------DDAFCRAMKRAGREVKWFSLEYEADFWLERETG 235
Query: 198 SFEVPAVGVVSQLQLHNMKVMGRHNYHN--AAVAALSVLGLDIGVDVEALNSTIEILRTP 255
+ G + ++ + G HN N AAVA +GL EAL ++ +
Sbjct: 236 RLK---QGNEDLIATQDIPLQGLHNATNVMAAVALCEAVGL----PREALLEHVKTFQGL 288
Query: 256 PHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
PHR++ + + GV ++DDSK TN+ AT + L+ + ++LGG K
Sbjct: 289 PHRVEKIG-EKNGVVFIDDSKGTNVGATAAAIAGLQ-NPLFVILGGMGK 335
>gi|385342563|ref|YP_005896434.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis M01-240149]
gi|385857876|ref|YP_005904388.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis NZ-05/33]
gi|416186513|ref|ZP_11613793.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis M0579]
gi|325136987|gb|EGC59584.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis M0579]
gi|325202769|gb|ADY98223.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis M01-240149]
gi|325208765|gb|ADZ04217.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis NZ-05/33]
Length = 445
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 144/289 (49%), Gaps = 30/289 (10%)
Query: 23 QSGKRVMSELDFAAQVI-PRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
Q+G RV+ +++ A ++ R K++A+TG+NGK+TV + VG + G++ + GN+G P
Sbjct: 89 QNGGRVLGDIELLADIVNRRGDKVIAITGSNGKTTVTSLVGYLCIKCGLDTVIAGNIGTP 148
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
+ EA + K V V+E+SS+Q+E + PT + VLN++ DHL+R+ + +
Sbjct: 149 VLEAEWQ-----REGKKADVWVLELSSFQLE-NTESLRPTAATVLNISEDHLDRYDDLLD 202
Query: 142 YALTKCHLFS----HMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTA 197
YA TK +F ++N + A+K + W E +T
Sbjct: 203 YAHTKAKIFRGDGVQVLNA--------DDAFCRAMKRAGREVKWFSLEHEADFWLERETG 254
Query: 198 SFEVPAVGVVSQLQLHNMKVMGRHNYHN--AAVAALSVLGLDIGVDVEALNSTIEILRTP 255
+ G + ++ + G HN N AAVA +GL EAL ++ +
Sbjct: 255 RLK---QGNEDLIATQDIPLQGLHNATNVMAAVALCEAVGL----PREALLEHVKTFQGL 307
Query: 256 PHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
PHR++ + + GV ++DDSK TN+ AT + L+ + ++LGG K
Sbjct: 308 PHRVEKIG-EKNGVVFIDDSKGTNVGATAAAIAGLQ-NPLFVILGGMGK 354
>gi|421129128|ref|ZP_15589337.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Leptospira
kirschneri str. 2008720114]
gi|410359660|gb|EKP06730.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Leptospira
kirschneri str. 2008720114]
Length = 463
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/286 (32%), Positives = 143/286 (50%), Gaps = 36/286 (12%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V+SE+D KI+ +TGT+GKST + + +L + GGNLG P +
Sbjct: 89 VISEIDLGRYFFKG--KIIGITGTDGKSTTTSLIAHLLKQGFPDLKEGGNLGIPFTSFCK 146
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
I+L AV+E+SSYQ+E + VSV LNL DHLERHKTM+NY K
Sbjct: 147 ESISL---------AVLELSSYQLEDSSPLHL-NVSVFLNLASDHLERHKTMENYFQAKL 196
Query: 148 HLFSHMVNTKLGLLPFGNQHLNEAI---KGHRFNLAWIGAFPGVK--IDTEA---KTASF 199
+ + + N+ L+ F + + E I ++ L G PG +D + KT+ F
Sbjct: 197 KI-ADLSNSNHSLIVF--EKIKERILNSTSYQCKLLSFGKTPGSNAFLDESSLKIKTSKF 253
Query: 200 EVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRM 259
+ +S+ L G HN N A + L+ +IG E++ + I + R PHR
Sbjct: 254 ----IYDISKFYLP-----GSHNRENLAASILA--AEEIGEKPESIQTRIPLFRGLPHRF 302
Query: 260 QIVHRDIQGVTWVDDSKATNLEATCTGLMDLKG-HKCVILLGGQAK 304
QI + G+++++DSK+TNL + G+ K + ++LGG+ K
Sbjct: 303 QIAGEKL-GISFINDSKSTNLHSMLAGMATWKNLDQTCLILGGRPK 347
>gi|416176664|ref|ZP_11609775.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis M6190]
gi|416190533|ref|ZP_11615782.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis ES14902]
gi|433491920|ref|ZP_20449020.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis NM586]
gi|325132966|gb|EGC55643.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis M6190]
gi|325138954|gb|EGC61504.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis ES14902]
gi|432230321|gb|ELK85998.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis NM586]
Length = 445
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 143/291 (49%), Gaps = 34/291 (11%)
Query: 23 QSGKRVMSELDFAAQVI-PRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
Q+G RV+ +++ A ++ R K++A+TG+NGK+TV + VG + G++ + GN+G P
Sbjct: 89 QNGGRVLGDIELLADIVNRRGDKVIAITGSNGKTTVTSLVGYLCIKCGLDTVIAGNIGTP 148
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
+ EA + K V V+E+SS+Q+E + PT + VLN++ DHL+R+ + +
Sbjct: 149 VLEAEWQ-----REGKKADVWVLELSSFQLE-NTESLRPTAATVLNISEDHLDRYDDLLD 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLN------EAIKGHRFNLAWIGAFPGVKIDTEAK 195
YA TK +F G Q LN A+K + W E +
Sbjct: 203 YAHTKAKIFRGD----------GVQVLNADDVFCRAMKRAGREVKWFSLEHEADFWLERE 252
Query: 196 TASFEVPAVGVVSQLQLHNMKVMGRHNYHN--AAVAALSVLGLDIGVDVEALNSTIEILR 253
T + G + ++ + G HN N AAVA +GL EAL ++ +
Sbjct: 253 TGRLK---QGNEDLIATQDIPLQGLHNATNVMAAVALCEAVGL----PREALLEHVKTFQ 305
Query: 254 TPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
PHR++ + GV ++DDSK TN+ AT + L+ + ++LGG K
Sbjct: 306 GLPHRVEKIGEK-NGVVFIDDSKGTNVGATAAAIAGLQ-NPLFVILGGMGK 354
>gi|304386674|ref|ZP_07368956.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Neisseria
meningitidis ATCC 13091]
gi|304339259|gb|EFM05337.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Neisseria
meningitidis ATCC 13091]
Length = 445
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 143/291 (49%), Gaps = 34/291 (11%)
Query: 23 QSGKRVMSELDFAAQVI-PRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
Q+G RV+ +++ A ++ R K++A+TG+NGK+TV + VG + G++ + GN+G P
Sbjct: 89 QNGGRVLGDIELLADIVNRRGDKVIAITGSNGKTTVTSLVGYLCIKCGLDTVIAGNIGTP 148
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
+ EA + K V V+E+SS+Q+E + PT + VLN++ DHL+R+ + +
Sbjct: 149 VLEAEWQ-----REGKKADVWVLELSSFQLE-NTESLRPTAATVLNISEDHLDRYDDLLD 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLN------EAIKGHRFNLAWIGAFPGVKIDTEAK 195
YA TK +F G Q LN A+K + W E +
Sbjct: 203 YAHTKAKIFRGD----------GVQVLNSDDVFCRAMKRAGREVKWFSLEHEADFWLERE 252
Query: 196 TASFEVPAVGVVSQLQLHNMKVMGRHNYHN--AAVAALSVLGLDIGVDVEALNSTIEILR 253
T + G + ++ + G HN N AAVA +GL EAL ++ +
Sbjct: 253 TGRLK---QGNEDLIATQDIPLQGLHNATNVMAAVALCEAVGL----PREALLEHVKTFQ 305
Query: 254 TPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
PHR++ + GV ++DDSK TN+ AT + L+ + ++LGG K
Sbjct: 306 GLPHRVEKIGEK-NGVVFIDDSKGTNVGATAAAIAGLQ-NPLFVILGGMGK 354
>gi|421566847|ref|ZP_16012588.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis NM3001]
gi|402344790|gb|EJU79923.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis NM3001]
Length = 445
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 144/289 (49%), Gaps = 30/289 (10%)
Query: 23 QSGKRVMSELDFAAQVI-PRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
Q+G RV+ +++ A ++ R K++A+TG+NGK+TV + VG + G++ + GN+G P
Sbjct: 89 QNGGRVLGDIELLADIVNRRGDKVIAITGSNGKTTVTSLVGYLCIKCGLDTVIAGNIGTP 148
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
+ EA + K V V+E+SS+Q+E + PT + VLN++ DHL+R+ + +
Sbjct: 149 VLEAEWQ-----REGKKADVWVLELSSFQLE-NTESLRPTAATVLNISEDHLDRYDDLLD 202
Query: 142 YALTKCHLFS----HMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTA 197
YA TK +F ++N + A+K + W E +T
Sbjct: 203 YAHTKAKIFRGDGVQVLNA--------DDAFCRAMKRAGREVKWFSLEHEADFWLERETG 254
Query: 198 SFEVPAVGVVSQLQLHNMKVMGRHNYHN--AAVAALSVLGLDIGVDVEALNSTIEILRTP 255
+ G + ++ + G HN N AAVA +GL EAL ++ +
Sbjct: 255 RLK---QGNEDLIATQDIPLQGLHNATNVMAAVALCEAVGL----PREALLEHVKTFQGL 307
Query: 256 PHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
PHR++ + + GV ++DDSK TN+ AT + L+ + ++LGG K
Sbjct: 308 PHRVEKIG-EKNGVVFIDDSKGTNVGATAAAIAGLQ-NPLFVILGGMGK 354
>gi|416159697|ref|ZP_11605961.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis N1568]
gi|433472801|ref|ZP_20430170.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis 97021]
gi|433481236|ref|ZP_20438505.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis 2006087]
gi|433483317|ref|ZP_20440553.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis 2002038]
gi|433485450|ref|ZP_20442655.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis 97014]
gi|325128836|gb|EGC51695.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis N1568]
gi|432212240|gb|ELK68182.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis 97021]
gi|432218534|gb|ELK74391.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis 2006087]
gi|432222687|gb|ELK78474.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis 2002038]
gi|432224362|gb|ELK80128.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis 97014]
Length = 445
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 144/291 (49%), Gaps = 34/291 (11%)
Query: 23 QSGKRVMSELDFAAQVI-PRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
Q+G RV+ +++ A ++ R K++A+TG+NGK+TV + VG + G++ + GN+G P
Sbjct: 89 QNGGRVLGDIELLADIVNRRGDKVIAITGSNGKTTVTSLVGYLCIKCGLDTVIAGNIGTP 148
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
+ EA + K V V+E+SS+Q+E + PT + VLN++ DHL+R+ + +
Sbjct: 149 VLEAEWQ-----REGKKADVWVLELSSFQLE-NTESLRPTAATVLNISEDHLDRYDDLLD 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLN------EAIKGHRFNLAWIGAFPGVKIDTEAK 195
YA TK +F G Q LN A+K + W E +
Sbjct: 203 YAHTKAKIFRGD----------GVQVLNSDDVFCRAMKRAGREVKWFSLEHEADFWLERE 252
Query: 196 TASFEVPAVGVVSQLQLHNMKVMGRHNYHN--AAVAALSVLGLDIGVDVEALNSTIEILR 253
T + G + ++ + G HN N AAVA +GL EAL ++ +
Sbjct: 253 TGRLK---QGNEDLIATQDIPLQGLHNATNVMAAVALCEAVGL----PREALLEHVKTFQ 305
Query: 254 TPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
PHR++ + + GV ++DDSK TN+ AT + L+ + ++LGG K
Sbjct: 306 GLPHRVEKIG-EKNGVVFIDDSKGTNVGATAAAIAGLQ-NPLFVILGGMGK 354
>gi|421560583|ref|ZP_16006440.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis NM2657]
gi|254671173|emb|CBA08279.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis alpha153]
gi|402339930|gb|EJU75136.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis NM2657]
Length = 445
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 144/291 (49%), Gaps = 34/291 (11%)
Query: 23 QSGKRVMSELDFAAQVI-PRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
Q+G RV+ +++ A ++ R K++A+TG+NGK+TV + VG + G++ + GN+G P
Sbjct: 89 QNGGRVLGDIELLADIVNRRGDKVIAITGSNGKTTVTSLVGYLCIKCGLDTVIAGNIGTP 148
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
+ EA + K V V+E+SS+Q+E + PT + VLN++ DHL+R+ + +
Sbjct: 149 VLEAEWQ-----REGKKADVWVLELSSFQLE-NTESLRPTAATVLNISEDHLDRYDDLLD 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLN------EAIKGHRFNLAWIGAFPGVKIDTEAK 195
YA TK +F G Q LN A+K + W E +
Sbjct: 203 YAHTKAKIFRGD----------GVQVLNADDAFCRAMKRAGREVKWFSLEHEADFWLERE 252
Query: 196 TASFEVPAVGVVSQLQLHNMKVMGRHNYHN--AAVAALSVLGLDIGVDVEALNSTIEILR 253
T + G + ++ + G HN N AAVA +GL EAL ++ +
Sbjct: 253 TGRLK---QGNEDLIATQDIPLQGLHNATNVMAAVALCEAVGL----PREALLEHVKTFQ 305
Query: 254 TPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
PHR++ + + GV ++DDSK TN+ AT + L+ + ++LGG K
Sbjct: 306 GLPHRVEKIG-EKNGVVFIDDSKGTNVGATAAAIAGLQ-NPLFVILGGMGK 354
>gi|433536048|ref|ZP_20492564.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis 77221]
gi|432275852|gb|ELL30918.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis 77221]
Length = 445
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 144/291 (49%), Gaps = 34/291 (11%)
Query: 23 QSGKRVMSELDFAAQVI-PRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
Q+G RV+ +++ A ++ R K++A+TG+NGK+TV + VG + G++ + GN+G P
Sbjct: 89 QNGGRVLGDIELLADIVNRRGDKVIAITGSNGKTTVTSLVGYLCIKCGLDTVIAGNIGTP 148
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
+ EA + K V V+E+SS+Q+E + PT + VLN++ DHL+R+ + +
Sbjct: 149 VLEAEWQ-----REGKKADVWVLELSSFQLE-NTESLRPTAATVLNISEDHLDRYDDLLD 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLN------EAIKGHRFNLAWIGAFPGVKIDTEAK 195
YA TK +F G Q LN A+K + W E +
Sbjct: 203 YAHTKAKIFRGD----------GVQVLNSDDVFCRAMKRAGREVKWFSLEHEADFWLERE 252
Query: 196 TASFEVPAVGVVSQLQLHNMKVMGRHNYHN--AAVAALSVLGLDIGVDVEALNSTIEILR 253
T + G + ++ + G HN N AAVA +GL EAL ++ +
Sbjct: 253 TGRLK---QGNEDLIATQDIPLQGLHNATNVMAAVALCEAVGL----PREALLEHVKTFQ 305
Query: 254 TPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
PHR++ + + GV ++DDSK TN+ AT + L+ + ++LGG K
Sbjct: 306 GLPHRVEKIG-EKNGVVFIDDSKGTNVGATAAAIAGLQ-NPLFVILGGMGK 354
>gi|254877481|ref|ZP_05250191.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Francisella
philomiragia subsp. philomiragia ATCC 25015]
gi|254843502|gb|EET21916.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Francisella
philomiragia subsp. philomiragia ATCC 25015]
Length = 414
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 138/281 (49%), Gaps = 38/281 (13%)
Query: 26 KRVMSELDFAAQVIPRS-IKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSE 84
++++S++D Q I + K++AVTG+NGKST+VT + +L +LG ++ + GN+G P
Sbjct: 79 QKIVSDIDLFYQSIRNTKAKMIAVTGSNGKSTIVTMLDFVLRNLGYKSILVGNIGTP--- 135
Query: 85 AAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYAL 144
L KF VVEVSS+Q+++ N + V+N++PDHL+R+K + Y
Sbjct: 136 ------PLNKIGEKFDYCVVEVSSFQIDLFNS-VEFDLGCVVNVSPDHLDRYKNYEEYK- 187
Query: 145 TKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAV 204
+KL L F + H + + G + V+ T
Sbjct: 188 ----------QSKLNLAKFSKDFFVYDV--HNTGIKYAGEYQIVRGSIYKDTTKL----- 230
Query: 205 GVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHR 264
L + + G HN N V L++ G+D+ + I+ + HR +IV +
Sbjct: 231 -----LDITETNLFGEHNLENIIV-VLNIFDR-FGIDISKAVAAIKKFKGLKHRCEIV-K 282
Query: 265 DIQGVTWVDDSKATNLEATCTGLMDLKGHKCVI-LLGGQAK 304
+I GVT+++DSK TN+ AT L + K +I LLGG AK
Sbjct: 283 NIAGVTYINDSKGTNVGATIAALNSITSSKNIILLLGGVAK 323
>gi|289423178|ref|ZP_06424993.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
[Peptostreptococcus anaerobius 653-L]
gi|289156509|gb|EFD05159.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
[Peptostreptococcus anaerobius 653-L]
Length = 457
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 153/285 (53%), Gaps = 21/285 (7%)
Query: 26 KRVMSELDFAAQV-IPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSE 84
K+V+SE++ A Q + ++I+ + +TGTNGK+T + VG++ G+E +V GN+GNP
Sbjct: 94 KKVISEIELAYQAGLKKNIRFVGITGTNGKTTTTSLVGEIFKAQGVETYVVGNIGNP--- 150
Query: 85 AAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYAL 144
A + + V V E+SS+Q+E + F PT S VLNLT DHL RH TM+NYA
Sbjct: 151 -AIEAVEMAGDGA---VLVTELSSFQLESID-MFSPTASTVLNLTEDHLNRHHTMENYAK 205
Query: 145 TKCHLFSHMVNTKLGLLPFGN---QHLNEAIKGHRFNLAWIGAFP-GVKIDTEAK-TASF 199
K +F + V+ + +L + + + + E + F G+ +D + +
Sbjct: 206 AKARIFENQVDDTVCILNYDDPITRSMAEDCHADVVFFSRKDKFERGIYLDDDNNIIVNN 265
Query: 200 EVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRM 259
E+ + + L+ + + G HN N +AA+ L L +GV++E L ++ + HR+
Sbjct: 266 EIEEIAL---LKADELSLPGGHNLEN-CMAAIG-LTLALGVEIEVLVKVLKTFKAVEHRL 320
Query: 260 QIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
+ V ++GV +V+DSK TN ++T + K +++ GG K
Sbjct: 321 EYVDT-VKGVKYVNDSKGTNPDSTIKAVQSYK-DPIILIAGGYDK 363
>gi|421538568|ref|ZP_15984743.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis 93003]
gi|402316238|gb|EJU51787.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis 93003]
Length = 445
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 143/291 (49%), Gaps = 34/291 (11%)
Query: 23 QSGKRVMSELDFAAQVI-PRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
Q+G RV+ +++ A ++ R K++A+TG+NGK+TV + VG + G++A + GN+G P
Sbjct: 89 QNGGRVLGDIELLADIVNRRGDKVIAITGSNGKTTVTSLVGYLCIKCGLDAVIAGNIGTP 148
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
+ EA L K V V+E+SS+Q+E + PT + VLN++ DHL R+ + +
Sbjct: 149 VLEA-----ELQREGKKADVWVLELSSFQLE-NTESLRPTAATVLNISEDHLNRYDDLLD 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLN------EAIKGHRFNLAWIGAFPGVKIDTEAK 195
YA TK +F G Q LN A+K + W E +
Sbjct: 203 YAHTKDKIFRGD----------GVQVLNADDAFCRAMKHAGREVKWFSLEHEADFWLERE 252
Query: 196 TASFEVPAVGVVSQLQLHNMKVMGRHNYHN--AAVAALSVLGLDIGVDVEALNSTIEILR 253
T + G + ++ + G HN N AAVA +GL EAL ++ +
Sbjct: 253 TGRLK---QGNEDLIATQDIPLQGLHNATNVMAAVALCEAVGL----PREALLEHVKTFQ 305
Query: 254 TPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
PHR++ + GV ++DDSK TN+ AT + L+ + ++LGG K
Sbjct: 306 GLPHRVEKIGEK-NGVVFIDDSKGTNVGATAAAIAGLQ-NPLFVILGGMGK 354
>gi|208778934|ref|ZP_03246280.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Francisella
novicida FTG]
gi|208744734|gb|EDZ91032.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Francisella
novicida FTG]
Length = 417
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 138/284 (48%), Gaps = 46/284 (16%)
Query: 27 RVMSELDFAAQVIPRS-IKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEA 85
+++S++D Q I + K +AVTG+NGKSTVVT +L LG ++ + GN+G P
Sbjct: 80 KIVSDIDIFYQYIKDTKAKTIAVTGSNGKSTVVTMTDFVLKDLGYKSILVGNIGTP---- 135
Query: 86 AFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSV--VLNLTPDHLERHKTMKNYA 143
AL KF VVEVSS+Q+++ N C + ++N++PDHL+R++ + Y
Sbjct: 136 -----ALNKIGEKFDYCVVEVSSFQIDLFN---CVRFDLGCIINVSPDHLDRYQNFEQYK 187
Query: 144 LTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPA 203
+KL L F N + H + + G + ++ +
Sbjct: 188 -----------QSKLNLAKFSNDFFVYDV--HNNGIKYAGEYQIIRGAIYRNSTKL---- 230
Query: 204 VGVVSQLQLHNMKVMGRHNYHNAAVA--ALSVLGLDIGVDVEALNSTIEILRTPPHRMQI 261
L + K+ G HN N V L LGLDI +A++S I+ + HR +I
Sbjct: 231 ------LDIAETKLFGEHNLENIIVVLNILDRLGLDIN---QAIDS-IKKFKGLEHRCKI 280
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVI-LLGGQAK 304
V + + T+++DSK TN+ AT L + K +I LLGG AK
Sbjct: 281 VKK-VNDTTYINDSKGTNVGATIAALNSITNSKNIILLLGGVAK 323
>gi|257125000|ref|YP_003163114.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Leptotrichia
buccalis C-1013-b]
gi|257048939|gb|ACV38123.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Leptotrichia
buccalis C-1013-b]
Length = 459
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 170/335 (50%), Gaps = 56/335 (16%)
Query: 9 LEFQLKATGL---ACLLQSGK----RVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFV 61
+EF +K+ G+ A LL+ K +V+SE+D A + + +++KI++ TGTNGK+T T +
Sbjct: 50 IEFIVKSPGIPWKAELLKVAKEKNVKVISEIDLAYKYVDKNVKIISFTGTNGKTTTSTKM 109
Query: 62 GQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPT 121
++LN G A + GN A F L + + K V+E+SSYQ+E N
Sbjct: 110 AELLNFSGFRAKLAGN-------AGFSFAKLVADEEKLDYIVLELSSYQLE-NNPQIHSN 161
Query: 122 VSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFGNQ--------------- 166
++ ++NLTPDHL R+ ++++Y +TK ++F V + L+ ++
Sbjct: 162 IAGIINLTPDHLTRYNSVEDYYITKFNIFDKQVESDFALINLDDKEFEKLYERNEIKEKI 221
Query: 167 -----HLNEAIKG----HRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQ--LQLHNM 215
+L+ KG ++ ++ + F +ID + +F+ V VS+ ++ +
Sbjct: 222 KSKKIYLSTETKGTIFVYKNDICIMKDFKK-RID---EIENFD-ENVDKVSEILMKTDEL 276
Query: 216 KVMGRHNYHNA--AVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVT-WV 272
+ G+HN N + + +L + E L ST+ + HR++ I+G T ++
Sbjct: 277 SLKGKHNLENMLFLIGSAKILNISNEKISEFLKSTVAL----EHRLENFF--IKGNTIFI 330
Query: 273 DDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLN 307
+DSK TN+E+T + D + +++LGG K ++
Sbjct: 331 NDSKGTNVESTLKAI-DSFDNSIIMILGGDDKKID 364
>gi|421564663|ref|ZP_16010460.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis NM3081]
gi|402345786|gb|EJU80892.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis NM3081]
Length = 445
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 143/291 (49%), Gaps = 34/291 (11%)
Query: 23 QSGKRVMSELDFAAQVI-PRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
Q+G RV+ +++ A ++ R K++A+TG+NGK+TV + VG + G++ + GN+G P
Sbjct: 89 QNGGRVLGDIELLADIVNRRGDKVIAITGSNGKTTVTSLVGYLCIKCGLDTVIAGNIGTP 148
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
+ EA + K V V+E+SS+Q+E + PT + VLN++ DHL+R+ + +
Sbjct: 149 VLEAEWQ-----REGKKADVWVLELSSFQLE-NTESLRPTAATVLNISEDHLDRYDDLLD 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLN------EAIKGHRFNLAWIGAFPGVKIDTEAK 195
YA TK +F G Q LN A+K + W E +
Sbjct: 203 YAHTKDKIFRGD----------GVQVLNADDAFCRAMKRAGREVKWFSLEYEADFWLERE 252
Query: 196 TASFEVPAVGVVSQLQLHNMKVMGRHNYHN--AAVAALSVLGLDIGVDVEALNSTIEILR 253
T + G + ++ + G HN N AAVA +GL EAL ++ +
Sbjct: 253 TGRLK---QGNEDLIATQDIPLQGLHNATNVMAAVALCEAVGL----PREALLEHVKTFQ 305
Query: 254 TPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
PHR++ + GV ++DDSK TN+ AT + L+ + ++LGG K
Sbjct: 306 GLPHRVEKIGEK-NGVVFIDDSKGTNVGATAAAIAGLQ-NPLFVILGGMGK 354
>gi|161870654|ref|YP_001599827.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Neisseria
meningitidis 053442]
gi|189082912|sp|A9M2H5.1|MURD_NEIM0 RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|161596207|gb|ABX73867.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis 053442]
Length = 445
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 144/291 (49%), Gaps = 34/291 (11%)
Query: 23 QSGKRVMSELDFAAQVI-PRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
Q+G RV+ +++ A ++ R K++A+TG+NGK+TV + VG + G++ + GN+G P
Sbjct: 89 QNGGRVLGDIELLADIVNRRGDKVIAITGSNGKTTVTSLVGYLCIKCGLDTVIAGNIGTP 148
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
+ EA + K V V+E+SS+Q+E + PT + VLN++ DHL+R+ + +
Sbjct: 149 VLEAEWQ-----REGKKADVWVLELSSFQLE-NTESLRPTAATVLNISEDHLDRYDDLLD 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLN------EAIKGHRFNLAWIGAFPGVKIDTEAK 195
YA TK +F G Q LN A+K + W E +
Sbjct: 203 YAHTKDKIFRGD----------GVQVLNADDAFCRAMKRAGREVKWFSLEYEADFWLERE 252
Query: 196 TASFEVPAVGVVSQLQLHNMKVMGRHNYHN--AAVAALSVLGLDIGVDVEALNSTIEILR 253
T + G + ++ + G HN N AAVA +GL EAL ++ +
Sbjct: 253 TGRLK---QGNEDLIATQDIPLQGLHNATNVMAAVALCEAVGL----PREALLEHVKTFQ 305
Query: 254 TPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
PHR++ + + GV ++DDSK TN+ AT + L+ + ++LGG K
Sbjct: 306 GLPHRVEKIG-EKNGVVFIDDSKGTNVGATAAAIAGLQ-NPLFVILGGMGK 354
>gi|162449933|ref|YP_001612300.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Sorangium
cellulosum So ce56]
gi|161160515|emb|CAN91820.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Sorangium
cellulosum So ce56]
Length = 456
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 92/294 (31%), Positives = 141/294 (47%), Gaps = 30/294 (10%)
Query: 18 LACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGN 77
L + +SG+ V+ EL+ A++ + S ++ V GTNGKST G ML G+ FVGGN
Sbjct: 85 LDAVARSGREVIGELELASRFV--SAPVVLVGGTNGKSTTTALTGAMLERAGLRTFVGGN 142
Query: 78 LGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQME-IPNKYFCPTVSVVLNLTPDHLERH 136
G PL+E + V V+E+SS+Q E +P + +LN+T DHL+R+
Sbjct: 143 FGTPLAEVVDQT---------WDVLVLEISSFQAERVPTLH--ARAHALLNITDDHLDRY 191
Query: 137 KTMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKT 196
+ YA K + F M + ++PFG++ + R + A + D A
Sbjct: 192 ASFAAYADAKGNPFERMTPDDVAVVPFGDELVARQAARGRARVVTFSARD-ARADVSAAG 250
Query: 197 ASFEVPAVGVVSQLQLHNMKVMGRHN-----YHNAAVAALSVLGLDIGVDVEALNSTIEI 251
+ G ++ L +++ G HN A AAL IG +AL S+ E
Sbjct: 251 GAIVDRVTG--ARYPLDRVRLAGAHNLANACASAALAAALGAPAAAIG---DAL-SSFEG 304
Query: 252 LRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKV 305
L HR +V D+ GV + DDSK TN+ A+ L L K V++ GG+ K+
Sbjct: 305 L---AHRTALVA-DVDGVRYYDDSKGTNVGASVAALSGLLEAKAVLIAGGRDKL 354
>gi|339319729|ref|YP_004679424.1| phospho-N-acetylmuramoyl-pentapeptide- transferase [Candidatus
Midichloria mitochondrii IricVA]
gi|338225854|gb|AEI88738.1| phospho-N-acetylmuramoyl-pentapeptide- transferase [Candidatus
Midichloria mitochondrii IricVA]
Length = 461
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 130/274 (47%), Gaps = 37/274 (13%)
Query: 31 ELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCI 90
+++F Q +++ + +TGTNGKST + +L + I+ +GGN+G P+ E
Sbjct: 106 DIEFLYQKTNKNVGFIGITGTNGKSTTTALINHVLRSVKIKTEIGGNIGTPVLE------ 159
Query: 91 ALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLF 150
L F V+EVSS+Q+++ K ++V L +TPDHL++H T K Y K +F
Sbjct: 160 -LEELNSGFY--VLEVSSFQLDLLEKTRF-NIAVCLTITPDHLDKHGTFKRYVEAKQQMF 215
Query: 151 SHMVNTKLGLLP----FGNQHLNEAIKGHRFNL----------AWIGAFPGVKIDTEAKT 196
++ L ++ NQ ++E I R + + GV D
Sbjct: 216 NNQEKGDLAIISTDSYINNQIMSEVIARKRAKVIPISRTEQIEGGVSVISGVLYDNYKSK 275
Query: 197 ASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPP 256
+ VP + ++G HN N A A + +G +GV E + + + ++ P
Sbjct: 276 KRYNVPDIN----------SLIGEHNGENMAAAFTACIG--VGVKPEEVIAAFKTYKSLP 323
Query: 257 HRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDL 290
HRM + HR G+ +++DSKATN ++T L +
Sbjct: 324 HRMDLFHR-FNGINFINDSKATNADSTYWALKNF 356
>gi|404493850|ref|YP_006717956.1| UDP-N-acetylmuramylalanine--D-glutamate ligase [Pelobacter
carbinolicus DSM 2380]
gi|122063252|sp|Q3A2G4.1|MURD_PELCD RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|77545881|gb|ABA89443.1| UDP-N-acetylmuramylalanine--D-glutamate ligase [Pelobacter
carbinolicus DSM 2380]
Length = 450
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 97/312 (31%), Positives = 141/312 (45%), Gaps = 55/312 (17%)
Query: 13 LKATGLACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEA 72
L +A LQ+G V E++ AA+ + S ++A+TGTNGKST +G+++ G A
Sbjct: 80 LTVPAVAGALQAGVPVQGEIEIAAREL--SAPMVAITGTNGKSTTTCLMGEIMRCWGRRA 137
Query: 73 FVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDH 132
FVGGNLG PL EA + + V E+SS+Q+E + F P ++LNLT DH
Sbjct: 138 FVGGNLGTPLIEA--------TRSTDWDWIVAEISSFQLEAIDT-FRPRYGMLLNLTADH 188
Query: 133 LERHKTMKNYALTKCHLFSHM-------VNTKLGL------------LPFGNQH-LNEAI 172
L+R+ M Y K LF +M VN L +PF + L+E +
Sbjct: 189 LDRYAGMGEYVAAKLRLFENMTAEDVAVVNADDALVVRSTTDLPCRKIPFSSSRVLDEGM 248
Query: 173 KGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALS 232
++ W A + D V+ LQL G HN N A +
Sbjct: 249 GFDGQHIVWRHAGRQERFD---------------VADLQLK-----GLHNVENVMAALIP 288
Query: 233 VLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKG 292
L D+ + HRM +V R+I GV+W DDSK TN+ + L L+G
Sbjct: 289 PLMEGCPTDIAW--KAVCGFSGLDHRMVLV-REIDGVSWYDDSKGTNVGSVVKSLAGLQG 345
Query: 293 HKCVILLGGQAK 304
++ GG+ K
Sbjct: 346 -PVTLIAGGKDK 356
>gi|301063235|ref|ZP_07203784.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [delta
proteobacterium NaphS2]
gi|300442663|gb|EFK06879.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [delta
proteobacterium NaphS2]
Length = 467
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 143/287 (49%), Gaps = 19/287 (6%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
++ E++ AA+ + + I+A TGTNGK+TV +F+G+ML G+ FVGGN+G PL+
Sbjct: 106 IIGEMELAARHV--DVPIIAATGTNGKTTVTSFLGRMLEDQGLAVFVGGNIGTPLT---- 159
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
A + K VVE+SS+Q++ + F P +S++LN++PDHL+R+ Y +K
Sbjct: 160 ---AYLMGEMKADYLVVEISSFQLDTIER-FTPEISIILNISPDHLDRYADYSAYIHSKL 215
Query: 148 HLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVV 207
+F + + +L + L + ++ G G ID + + AV
Sbjct: 216 RIFENQGAGQTVILNDDDIVLKKTTPPEGTSVLRYGLKKGAGIDAFIENEGI-LSAVTEK 274
Query: 208 SQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQ 267
+ L + G HN N + A+ + G +G+ E + TI + +R++ V +
Sbjct: 275 GRFNLSAFSLPGAHNLEN--LLAVVLAGQALGLAPEPIQKTINAFKGLSNRLERVCANGH 332
Query: 268 G-----VTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQ 309
G V + +DSKATN++A + +++ GG+ K N Q
Sbjct: 333 GFLQKKVQFYNDSKATNVDAAVRAVQSFD-KPLILIAGGRHKGSNYQ 378
>gi|78184101|ref|YP_376536.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Synechococcus
sp. CC9902]
gi|118595699|sp|Q3AZI5.1|MURD_SYNS9 RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|78168395|gb|ABB25492.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Synechococcus sp.
CC9902]
Length = 462
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 94/300 (31%), Positives = 142/300 (47%), Gaps = 29/300 (9%)
Query: 18 LACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGN 77
L L Q G ++ E++ A + + I + +TGTNGK+TV + +L H GI A +GGN
Sbjct: 86 LNGLRQEGVQIRGEIELAWEAL-NDIPWVGITGTNGKTTVTHLLSHVLGHAGIVAPMGGN 144
Query: 78 LGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEI-PNKYFCPTVSVVLNLTPDHLERH 136
+G ++ A + KP + V+E+SSYQ+E PN P++ + LTPDHLERH
Sbjct: 145 MGVSAADMALKIRRGETPKPDW--LVMELSSYQIEAGPN--LAPSIGIWTTLTPDHLERH 200
Query: 137 KTMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLA---WIGAFPGVKIDTE 193
T++ Y K H + + L F + + HR +L W+ A P D
Sbjct: 201 GTLEAYRAIK-----HSLLQRSSLAIFNGDDAD--LSAHRPSLKRGMWVKAAPPCHDD-- 251
Query: 194 AKTASFEVPAVGVVSQLQLHNM---KVM---GRHNYHNAAVAALSVLGLDIGVDVEALNS 247
A F + G V + M KV+ G HN N + ++ IG++ E +
Sbjct: 252 -PPADFWIDDAGTVQAREGGAMFPAKVLAMPGAHNRQN--LLLVTAAAAQIGLNAEQIAQ 308
Query: 248 TIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLN 307
+E PHR++ + +DSKATN +A GL + G V+L GGQ K N
Sbjct: 309 GLESFPGVPHRLENLG-STSSADVFNDSKATNYDAAAVGLQAMAG-PVVVLAGGQTKRGN 366
>gi|392407236|ref|YP_006443844.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Anaerobaculum
mobile DSM 13181]
gi|390620372|gb|AFM21519.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Anaerobaculum
mobile DSM 13181]
Length = 453
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 97/310 (31%), Positives = 150/310 (48%), Gaps = 40/310 (12%)
Query: 23 QSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPL 82
Q G + ELDF + S KI+ VTGTNGKST V +L LG A + GN G PL
Sbjct: 82 QEGLPLKGELDFIYPYL--SGKIIGVTGTNGKSTTAALVHHLLTKLGYNAALAGNFGIPL 139
Query: 83 SEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNY 142
+ A KF V+EVSS+Q+ +F +++V N+ PDH++ H + + Y
Sbjct: 140 ANFAM---------KKFDYIVIEVSSFQLHWAT-HFSFDIAIVTNICPDHIDWHGSFEAY 189
Query: 143 ALTKCHLFSHMV--------NTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFP--GVKIDT 192
K + + + LL GN+ KG R L W P G +
Sbjct: 190 VKAKRRIIDLLAPDGYCIYRTKEEDLLQIGNR------KGAR--LYWSSNTPVYGNAVQD 241
Query: 193 EAKTASFEVPAVGVVSQLQLHN---MKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTI 249
+ ++ EV + L+L + + + GRHN NAA+A +V L G DV + ++
Sbjct: 242 DLVLSNSEVVLMANDHNLKLFSPTTLPLFGRHNVENAAMAMAAVYYL--GRDVNKASKSL 299
Query: 250 EILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQ 309
+ PHR + V GV ++DDSK TN+ +T T + + G K V++LGG+ K G+
Sbjct: 300 LDFKNLPHRCERVGEK-DGVLFIDDSKGTNVASTITAITSIPGRK-VVILGGRGK---GE 354
Query: 310 ESNGFEKLIE 319
+ + K+++
Sbjct: 355 QYDELAKVVK 364
>gi|312885132|ref|ZP_07744816.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Vibrio
caribbenthicus ATCC BAA-2122]
gi|309367205|gb|EFP94773.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Vibrio
caribbenthicus ATCC BAA-2122]
Length = 441
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 98/337 (29%), Positives = 162/337 (48%), Gaps = 47/337 (13%)
Query: 5 WLFLLEFQLKATGLAC-------LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTV 57
WL + + G+A +L SG V+ +++ A ++A+TG+NGKSTV
Sbjct: 67 WLLNADLVVTNPGIALATPEIQQVLASGIPVVGDIELFAW--DNDKPVIAITGSNGKSTV 124
Query: 58 VTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY 117
+ GQ L+ G++ VGGN+G P AL + + + V+E+SS+Q+E +
Sbjct: 125 TDWTGQALSAAGLDVAVGGNIGVP---------ALDLLQHQADIYVLELSSFQLETTSS- 174
Query: 118 FCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSH----MVNT-KLGLLPFGNQHLNEAI 172
V+V LNL+ DH++R+++M +Y K +F + +VN + P + E
Sbjct: 175 LKSKVAVFLNLSEDHMDRYRSMDDYRNAKLRIFDNADVRIVNADDIATYPLKDSSYLEFS 234
Query: 173 KGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALS 232
+ + A + T+ F + V+S ++ ++GRHN N V
Sbjct: 235 LDKKTDFA---------VTTQDDVEFFTLQGKKVLSTSEI---SLVGRHNVSNCLV---- 278
Query: 233 VLGL--DIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDL 290
VL L +GVD+E I+ HR Q+V D G+ WV+DSKATNL +T L L
Sbjct: 279 VLALLHSVGVDIERALPVIKSYSGLTHRCQVV-LDNGGIKWVNDSKATNLASTKAALTGL 337
Query: 291 KGH-KCVILLGGQAKVLNGQESNGFEKLIEPLNHHRC 326
+ K +L+GG +K G + + +++ LN C
Sbjct: 338 RMEGKLFLLVGGVSK---GADFSELAPILKNLNVQLC 371
>gi|170739957|ref|YP_001768612.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
[Methylobacterium sp. 4-46]
gi|168194231|gb|ACA16178.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Methylobacterium
sp. 4-46]
Length = 460
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 88/272 (32%), Positives = 132/272 (48%), Gaps = 38/272 (13%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
+A+TGTNGKST + +L G + +GGN+G A +A PS + +V V+
Sbjct: 116 FVAITGTNGKSTTTALIAHVLRETGHDVQMGGNIGT-----AILSLAPPS---RDRVHVI 167
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFG 164
E+SS+Q+++ P++ V+LN+TPDHL+RH TM+NYA K L + + +G+
Sbjct: 168 EMSSFQIDL-TPTLAPSIGVLLNVTPDHLDRHGTMENYAAIKERLVAGADHAVIGV---- 222
Query: 165 NQHLNEAIKGHR------------FNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQL 212
+ AI R I A G+ ID A+ + G+ S
Sbjct: 223 DDDYTRAISARRDGPLTRVHVGEGAEAPGILARHGLLIDGTAEPPAPVADLTGIAS---- 278
Query: 213 HNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWV 272
+ G HN+ NAAVA GL GV +A + PHRM+ V R GV ++
Sbjct: 279 ----LRGAHNWQNAAVAYAVARGL--GVAPDAFARALRSFPGLPHRMEEVGRR-GGVLFI 331
Query: 273 DDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
+DSKATN ++T L + +LGG+ K
Sbjct: 332 NDSKATNADSTEKALAAFP--RVHWILGGKPK 361
>gi|260891632|ref|ZP_05902895.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Leptotrichia
hofstadii F0254]
gi|260858642|gb|EEX73142.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Leptotrichia
hofstadii F0254]
Length = 459
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 157/318 (49%), Gaps = 39/318 (12%)
Query: 14 KATGLACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAF 73
KA L + G +++SE+D A + + ++IKI++ TGTNGK+T T + ++LN G A
Sbjct: 63 KAELLKVAKEKGVKIISEIDLAYKYVDKNIKIISFTGTNGKTTTSTKMAELLNFAGFRAK 122
Query: 74 VGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHL 133
+ GN A F L + + + V+E+SSYQ+E N ++ ++NLTPDHL
Sbjct: 123 LAGN-------AGFSFAKLVADEEELDYIVLELSSYQLE-NNPQIHSNIAGIINLTPDHL 174
Query: 134 ERHKTMKNYALTKCHLFSHMVNTKLGLLPFGNQ---------HLNEAIKGHRFNLA---- 180
R++++++Y +TK +F L+ ++ +NE +K + L+
Sbjct: 175 TRYESVEDYYITKFAIFDKQTGDDFALINLDDEVFAELYERREINEKMKAQKVYLSKETK 234
Query: 181 -WIGAFP-GVKIDTEAKTASFEVPAVG----VVSQ--LQLHNMKVMGRHNYHNA--AVAA 230
+ + ++I + E+ G +S+ L+ + + GRHN N +++
Sbjct: 235 GTVFVYENNIRIMKDLSKRIDEIQNFGEKIDEISEILLKTEELSLKGRHNLENMLFLISS 294
Query: 231 LSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVT-WVDDSKATNLEATCTGLMD 289
+L + E L ST HR++ ++G T +++DSK TN+E+T + D
Sbjct: 295 AKILNVKNEKLAEFLKST----NALEHRLENFF--VKGNTAFINDSKGTNVESTLKAI-D 347
Query: 290 LKGHKCVILLGGQAKVLN 307
+ +++LGG K ++
Sbjct: 348 SFNNSIIMILGGDDKKID 365
>gi|418678940|ref|ZP_13240212.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Leptospira
kirschneri serovar Grippotyphosa str. RM52]
gi|418687863|ref|ZP_13249021.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Leptospira
kirschneri serovar Grippotyphosa str. Moskva]
gi|418739344|ref|ZP_13295731.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Leptospira
kirschneri serovar Valbuzzi str. 200702274]
gi|421092088|ref|ZP_15552846.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Leptospira
kirschneri str. 200802841]
gi|400320700|gb|EJO68562.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Leptospira
kirschneri serovar Grippotyphosa str. RM52]
gi|409999104|gb|EKO49802.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Leptospira
kirschneri str. 200802841]
gi|410737602|gb|EKQ82342.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Leptospira
kirschneri serovar Grippotyphosa str. Moskva]
gi|410753343|gb|EKR10309.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Leptospira
kirschneri serovar Valbuzzi str. 200702274]
Length = 463
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 142/290 (48%), Gaps = 44/290 (15%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V+SE+D KI+ +TGT+GKST + + +L + GGNLG P +
Sbjct: 89 VISEIDLGRYFFKG--KIIGITGTDGKSTTTSLIAHLLKQGFPDLREGGNLGIPFTSFCK 146
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
I+L AV+E+SSYQ+E + VSV LNL DHLERHKTM+NY K
Sbjct: 147 ESISL---------AVLELSSYQLEDSSPLHL-NVSVFLNLASDHLERHKTMENYFQAKL 196
Query: 148 HLFSHMVNTKLGLLPFGNQHLNEAIKGHRFN-------LAWIGAFPGVK--IDTEA---K 195
+ + + N+ L+ ++E IK N L G PG +D + K
Sbjct: 197 KI-ADLSNSNHSLI------VSEKIKERILNSTSYQCKLLSFGKTPGSNAFLDESSLKIK 249
Query: 196 TASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTP 255
T+ F + +S+ L G HN N A + L+ +IG E++ + I + R
Sbjct: 250 TSKF----IYDISKFYLP-----GSHNRENLAASILA--AEEIGEKPESIQTRIPLFRGL 298
Query: 256 PHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKG-HKCVILLGGQAK 304
PHR QI + G+++++DSK+TNL + G+ K + ++LGG+ K
Sbjct: 299 PHRFQIAGEKL-GISFINDSKSTNLHSMLAGMATWKNLDQTCLILGGRPK 347
>gi|110639124|ref|YP_679333.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Cytophaga
hutchinsonii ATCC 33406]
gi|118595652|sp|Q11RH3.1|MURD_CYTH3 RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|110281805|gb|ABG59991.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Cytophaga
hutchinsonii ATCC 33406]
Length = 450
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 158/322 (49%), Gaps = 36/322 (11%)
Query: 14 KATGLACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAF 73
KA + + V+SE++FA + I K +A+TG+NGK+T +L LG
Sbjct: 76 KAPIMKLIRSKAIEVISEIEFAYRHIHPGAKFIAITGSNGKTTTTLLTHHILAQLGYSVG 135
Query: 74 VGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDH 132
+GGN+G L+ H K V V+E+SS+Q++ + Y F V+V+LN+TPDH
Sbjct: 136 LGGNIGTSLARQIIH--------EKKDVYVLELSSFQLD--DMYTFKADVAVLLNITPDH 185
Query: 133 LERHK-TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWI--------- 182
L+R++ +NY +K +F ++ + + + K H + ++
Sbjct: 186 LDRYEYKFENYTASKFRIFQNLTPADYYITYSEDSVIESYKKDHPVDARYVPVSLKQLYS 245
Query: 183 -GAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVD 241
GA+ ++ KT VV+ + G+HNY N +AAL+ + IG D
Sbjct: 246 AGAY------SDEKTIQIHALDDTVVT-CNTEEFPLQGKHNYIN-IMAALNA-AVSIGAD 296
Query: 242 VEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGG 301
+ ++I+ R PHR++ V I GV +V+DSKATN+++ L +K V+++GG
Sbjct: 297 IHKSIASIKSFRNAPHRLEFVGS-IYGVKFVNDSKATNVDSVWYALDSMKT-PVVLIVGG 354
Query: 302 QAKVLNGQESNGFEKLIEPLNH 323
V G + + E L++ H
Sbjct: 355 ---VDKGNDYSQIEALVKEKVH 373
>gi|402830123|ref|ZP_10878828.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Capnocytophaga
sp. CM59]
gi|402286180|gb|EJU34656.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Capnocytophaga
sp. CM59]
Length = 445
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 152/285 (53%), Gaps = 20/285 (7%)
Query: 25 GKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSE 84
G ++SE++FA++ + KI+A+TG+NGK+T + + +L G+ VGGN+GN +
Sbjct: 85 GIEIISEIEFASRYT--NAKIIAITGSNGKTTTTSLIYHLLEQAGLSVGVGGNIGNSFA- 141
Query: 85 AAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK-TMKNYA 143
+ + +PK + V+E+SS+Q++ F P ++++LN+TPDHL+R+ +NY
Sbjct: 142 ------YMVAKEPK-EYYVLEISSFQLDDITS-FRPHIALLLNITPDHLDRYNYEFQNYI 193
Query: 144 LTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEA----KTASF 199
K + ++ + + L E + R A + F K +T+ +
Sbjct: 194 DAKFRITAYQEANDYLIYDADDPVLQEELAKRRDIKAQLLPFSLEKANTQGAYCLDEKNI 253
Query: 200 EVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRM 259
+ + ++ ++ + G+HN NA A + L+I E++ +++ + PHR+
Sbjct: 254 HINFNQNLLEMSTKDLTIKGKHNLKNAMGATMVAKMLNI--RNESIRNSLMTFQGVPHRL 311
Query: 260 QIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
+ V R+++GV +++DSKATN+ + L ++ + V ++GGQ K
Sbjct: 312 EFV-REVEGVKYINDSKATNVNSVYYALDSMEDN-LVWIVGGQDK 354
>gi|218768812|ref|YP_002343324.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Neisseria
meningitidis Z2491]
gi|433479141|ref|ZP_20436439.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis 63041]
gi|433512782|ref|ZP_20469582.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis 63049]
gi|433519282|ref|ZP_20476005.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis 65014]
gi|433540351|ref|ZP_20496807.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis 63006]
gi|30316128|sp|Q9JSZ5.1|MURD_NEIMA RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|121052820|emb|CAM09167.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis Z2491]
gi|432218495|gb|ELK74353.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis 63041]
gi|432249608|gb|ELL05011.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis 63049]
gi|432256210|gb|ELL11534.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis 65014]
gi|432278000|gb|ELL33045.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis 63006]
Length = 445
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 144/289 (49%), Gaps = 30/289 (10%)
Query: 23 QSGKRVMSELDFAAQVI-PRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
++G RV+ +++ A ++ R K++A+TG+NGK+TV + VG + G++ + GN+G P
Sbjct: 89 RNGGRVLGDIELLADIVNRRGDKVIAITGSNGKTTVTSLVGYLCIKCGLDTVIAGNIGAP 148
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
+ EA L K V V+E+SS+Q+E + PT + VLN++ DHL+R+ + +
Sbjct: 149 VLEA-----ELQREGKKADVWVLELSSFQLE-NTESLRPTAATVLNISEDHLDRYDDLLD 202
Query: 142 YALTKCHLFS----HMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTA 197
YA TK +F ++N + A+K + W E +T
Sbjct: 203 YAHTKAKIFRGDGVQVLNA--------DDAFCRAMKRAGREVKWFSLEYEADFWLERETG 254
Query: 198 SFEVPAVGVVSQLQLHNMKVMGRHNYHN--AAVAALSVLGLDIGVDVEALNSTIEILRTP 255
+ G + ++ + G HN N AAVA +GL EAL ++ +
Sbjct: 255 RLK---QGNEDLIATQDIPLQGLHNATNVMAAVALCEAVGL----PREALLEHVKTFQGL 307
Query: 256 PHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
PHR++ + + GV ++DDSK TN+ AT + L+ + ++LGG K
Sbjct: 308 PHRVEKIG-EKNGVVFIDDSKGTNVGATAAAIAGLQ-NPLFVILGGMGK 354
>gi|269118797|ref|YP_003306974.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Sebaldella
termitidis ATCC 33386]
gi|268612675|gb|ACZ07043.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Sebaldella
termitidis ATCC 33386]
Length = 445
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 156/328 (47%), Gaps = 50/328 (15%)
Query: 9 LEFQLKATGL---ACLLQSGKR----VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFV 61
+EF +K+ G+ A LL+ V+SE+D A + + + KI+++TGTNGK+T T +
Sbjct: 50 IEFIVKSPGIPWDAELLEKADSLRISVISEIDLAYRYMDKKTKIISITGTNGKTTTATKI 109
Query: 62 GQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPT 121
++L G +A + GN A F L S + V+E+SSYQ+E +
Sbjct: 110 YELLKEAGFDAELAGN-------AGFSFAKLVSDGKEPDYVVLELSSYQLE-NDPEVHSH 161
Query: 122 VSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFG----------NQHLNEA 171
++ ++NLTPDHL R+ ++ +Y TK ++F H L+ N+ +++
Sbjct: 162 IAGIINLTPDHLTRYNSLDDYYKTKFNIFDHQNENDYALINLDDKEILRIISENKDIDDK 221
Query: 172 IKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQ--------LQLHNMKVMGRHNY 223
IK R L+ E K F+ + V+ ++ + + G+HN
Sbjct: 222 IKAKRIFLSG-----------EKKADVFQKDGMINVTDHNSQLIPLMKTSELSLKGKHNL 270
Query: 224 HNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVT-WVDDSKATNLEA 282
N + + +G+ + VD+E + S + + HR++ +G T +++DSK TN E+
Sbjct: 271 EN--ILFIISVGMILNVDIEVMKSFLSSTKPLEHRLENFFE--KGKTVFINDSKGTNSES 326
Query: 283 TCTGLMDLKGHKCVILLGGQAKVLNGQE 310
T + G V++ GG K + +E
Sbjct: 327 TIKAIEAF-GKSTVLICGGYDKQASNKE 353
>gi|329122141|ref|ZP_08250749.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Dialister
micraerophilus DSM 19965]
gi|327466948|gb|EGF12464.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Dialister
micraerophilus DSM 19965]
Length = 449
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 99/284 (34%), Positives = 148/284 (52%), Gaps = 32/284 (11%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V+SE++ A + SI LAVTGTNGK+T +G ML + G + V GNLG LS+ A
Sbjct: 91 VISEIELAFCITKASI--LAVTGTNGKTTTTKLLGLMLKNSGKKFAVAGNLGVSLSDKA- 147
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
L K + EVSS+Q+E K F P + +LN+TPDHLERH TM+ Y K
Sbjct: 148 ---DLIDEKS---IIAAEVSSFQLEFI-KNFKPKTAAILNITPDHLERHHTMEAYVQAKA 200
Query: 148 HLFSHMVNTKLGLLPFGNQHLNE----AIKGHRFNLAWI------GAFPGVKIDTEAKTA 197
+F +M LL +++ NE A K L I GAF +D E
Sbjct: 201 RIFENMNFENCILLNADDKYTNELTEMANKHTNVCLFSIQKNIDNGAF----LDGEELVI 256
Query: 198 SFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPH 257
S++ + + ++ +L ++ G+ NY NA A S L G+ +EA+ + ++ + PH
Sbjct: 257 SYKGNKINICNKNEL---QIKGKQNYANALAA--SFLAFFSGISLEAIRAALKEFKGLPH 311
Query: 258 RMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGG 301
R++ V R + + + +DSKATN +A+ G+ K VIL+ G
Sbjct: 312 RIEFV-RKFKNINYYNDSKATNTDASIKGMEAF--DKPVILIAG 352
>gi|212702355|ref|ZP_03310483.1| hypothetical protein DESPIG_00368 [Desulfovibrio piger ATCC 29098]
gi|212674233|gb|EEB34716.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Desulfovibrio
piger ATCC 29098]
Length = 436
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 139/300 (46%), Gaps = 51/300 (17%)
Query: 24 SGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLS 83
G +++E++ A + + +LAVTGT+GK+T V+ ML G+ F+GGN+G PLS
Sbjct: 103 EGTEILAEMELAWRALDGE-PVLAVTGTSGKTTTVSLAAAMLREQGLRVFLGGNIGTPLS 161
Query: 84 EAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYA 143
E S K V V+E SS+Q++ + F P V+VVLN++P+HL+ HK M+ Y
Sbjct: 162 EYLL-------SGEKADVLVLETSSFQLQCCST-FHPRVAVVLNISPNHLDYHKDMEEYI 213
Query: 144 LTKCHLFSHMVNTKLGLLPFGNQHLNE--AIKGHRFNLAWI---GAFPGVKIDTEAKTAS 198
K LF L +L L E A G R WI G FP
Sbjct: 214 EAKFRLFRCQTEEDLAVLA---PELEETAARFGLRARKVWIRPEGRFP------------ 258
Query: 199 FEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHR 258
+ + G+HN NA A + GV +E + + P+R
Sbjct: 259 ---------------DCPLFGQHNQFNAEAAWQAC--RPFGVTLENAARAVAAFKPLPNR 301
Query: 259 MQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
++ V R + GV +V+DSK T + A L + H +L GG+ K G + +G + L+
Sbjct: 302 LESVAR-VHGVLYVNDSKCTTVAALEVALEAMD-HPVHLLCGGKFK---GGDLDGMKDLL 356
>gi|418694755|ref|ZP_13255788.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Leptospira
kirschneri str. H1]
gi|409957452|gb|EKO16360.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Leptospira
kirschneri str. H1]
Length = 463
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/286 (31%), Positives = 143/286 (50%), Gaps = 36/286 (12%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V+SE+D KI+ +TGT+GKST + + +L + GGNLG P +
Sbjct: 89 VISEIDLGRYFFKG--KIIGITGTDGKSTTTSLIAHLLKQGFPDLKEGGNLGIPFTSFCK 146
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
I+L AV+E+SSYQ+E + VSV LNL DHLERHKTM+NY K
Sbjct: 147 ESISL---------AVLELSSYQLEDSSPLHL-NVSVFLNLASDHLERHKTMENYFQAKL 196
Query: 148 HLFSHMVNTKLGLLPFGNQHLNEAI---KGHRFNLAWIGAFPGVK--IDTEA---KTASF 199
+ + + N+ L+ ++ + E I ++ L G PG +D + KT+ F
Sbjct: 197 KI-ADLSNSNHSLIV--SEKIKERILNSTSYQCKLLSFGKTPGSNAFLDESSLKIKTSKF 253
Query: 200 EVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRM 259
+ +S+ L G HN N A + L+ +IG E++ + I + R PHR
Sbjct: 254 ----IYDISKFYLP-----GSHNRENLAASILA--AEEIGEKPESIQTRIPLFRGLPHRF 302
Query: 260 QIVHRDIQGVTWVDDSKATNLEATCTGLMDLKG-HKCVILLGGQAK 304
QI + G+++++DSK+TNL + G+ K + ++LGG+ K
Sbjct: 303 QIAGEKL-GISFINDSKSTNLHSMLAGMATWKNLDQTCLILGGRPK 347
>gi|421107819|ref|ZP_15568368.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Leptospira
kirschneri str. H2]
gi|410007101|gb|EKO60814.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Leptospira
kirschneri str. H2]
Length = 463
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/286 (31%), Positives = 143/286 (50%), Gaps = 36/286 (12%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V+SE+D KI+ +TGT+GKST + + +L + GGNLG P +
Sbjct: 89 VISEIDLGRYFFKG--KIIGITGTDGKSTTTSLIAHLLKQGFPDLKEGGNLGIPFTSFCK 146
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
I+L AV+E+SSYQ+E + VSV LNL DHLERHKTM+NY K
Sbjct: 147 ESISL---------AVLELSSYQLEDSSPLHL-NVSVFLNLASDHLERHKTMENYFQAKL 196
Query: 148 HLFSHMVNTKLGLLPFGNQHLNEAI---KGHRFNLAWIGAFPGVK--IDTEA---KTASF 199
+ + + N+ L+ ++ + E I ++ L G PG +D + KT+ F
Sbjct: 197 KI-ADLSNSNHSLIV--SEKIKERILNSTSYQCKLLSFGKTPGSNAFLDESSLKIKTSKF 253
Query: 200 EVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRM 259
+ +S+ L G HN N A + L+ +IG E++ + I + R PHR
Sbjct: 254 ----IYDISKFYLP-----GSHNRENLAASILA--AEEIGEKPESIQTRIPLFRGLPHRF 302
Query: 260 QIVHRDIQGVTWVDDSKATNLEATCTGLMDLKG-HKCVILLGGQAK 304
QI + G+++++DSK+TNL + G+ K + ++LGG+ K
Sbjct: 303 QIAGEKL-GISFINDSKSTNLHSMLAGMATWKNLDQTCLILGGRPK 347
>gi|327399667|ref|YP_004340536.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Hippea maritima
DSM 10411]
gi|327182296|gb|AEA34477.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Hippea maritima
DSM 10411]
Length = 435
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 135/281 (48%), Gaps = 28/281 (9%)
Query: 27 RVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAA 86
+++SEL+ + KI+A+TGTNGKST V V ++L GN G PLSEA
Sbjct: 79 KLISELELGYRYAKG--KIIAITGTNGKSTTVALVERILKGASKRVIACGNYGLPLSEAI 136
Query: 87 FHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTK 146
+ + VVE SSYQ+E +K F P ++ +LN+ DHL H +M NY K
Sbjct: 137 YENA---------EYYVVEASSYQLEFIDK-FKPNIAAILNIAFDHLSWHGSMDNYIEAK 186
Query: 147 CHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGV 206
+F + + F + I + NL + K D A FE V V
Sbjct: 187 KKIFKNQLEDDF----FIKNDSDSYIFDGKANLFLVS-----KRDRNA-DCFFEKNGVIV 236
Query: 207 --VSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHR 264
L++ + G + N A AAL +GL G++ + + + + HR++ V
Sbjct: 237 NRPEYLRIDKTGLFGSKVFENIAFAAL--IGLLCGIEKKTIKEVVGTMSNLEHRIEFVD- 293
Query: 265 DIQGVTWVDDSKATNLEATCTGLMDL-KGHKCVILLGGQAK 304
+I GV + +DSKATNL+A + +G K VI+LGG+ K
Sbjct: 294 EIDGVKFYNDSKATNLDAVEAAINSFDEGIKIVIILGGKHK 334
>gi|398341290|ref|ZP_10525993.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Leptospira
kirschneri serovar Bim str. 1051]
Length = 463
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 142/290 (48%), Gaps = 44/290 (15%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V+SE+D KI+ +TGT+GKST + + +L + GGNLG P +
Sbjct: 89 VISEIDLGRYFFKG--KIIGITGTDGKSTTTSLIAHLLKQGFPDLKEGGNLGIPFTSFCK 146
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
I+L AV+E+SSYQ+E + VSV LNL DHLERHKTM+NY K
Sbjct: 147 ESISL---------AVLELSSYQLEDSSPLHL-NVSVFLNLASDHLERHKTMENYFQAKL 196
Query: 148 HLFSHMVNTKLGLLPFGNQHLNEAIKGHRFN-------LAWIGAFPGVK--IDTEA---K 195
+ + + N+ L+ ++E IK N L G PG +D + K
Sbjct: 197 KI-ADLSNSNHSLI------VSEKIKERILNSTSYQCKLLSFGKTPGSNAFLDESSLKIK 249
Query: 196 TASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTP 255
T+ F + +S+ L G HN N A + L+ +IG E++ + I + R
Sbjct: 250 TSKF----IYDISKFYLP-----GSHNRENLAASILA--AEEIGEKPESIQTRIPLFRGL 298
Query: 256 PHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKG-HKCVILLGGQAK 304
PHR QI + G+++++DSK+TNL + G+ K + ++LGG+ K
Sbjct: 299 PHRFQIAGEKL-GISFINDSKSTNLHSMLAGMATWKNLDQTCLILGGRPK 347
>gi|340783400|ref|YP_004750007.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Acidithiobacillus
caldus SM-1]
gi|340557551|gb|AEK59305.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Acidithiobacillus
caldus SM-1]
Length = 454
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/272 (32%), Positives = 136/272 (50%), Gaps = 37/272 (13%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALP-SSKPKFQVAV 103
I A+TG+NGKSTV T +G+M G VGGNLG P + LP + P+ ++ V
Sbjct: 111 IAAITGSNGKSTVTTLLGEMAKAAGRRVAVGGNLGTPALD------LLPEAGAPEPELYV 164
Query: 104 VEVSSYQMEIPNKYFC----PTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLG 159
+E+SS+Q+ ++C P V+ +LNL+PDHL+ H M+ Y K +F M
Sbjct: 165 LELSSFQL-----HYCHALRPRVAAILNLSPDHLDWHGDMEAYLAAKARIFRTMGEGDTL 219
Query: 160 LLPFGNQHLNE-------AIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQL 212
+L + L ++ RF G P ++DT A + P+ + + L
Sbjct: 220 VLNGEDPALQSLPAKAPAGVEIRRF-----GHTP--QLDTWADDLALHWPS---AAPMPL 269
Query: 213 HNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWV 272
++ + G+HN N V A +++ + + A+ R PHR+Q V R + GV +
Sbjct: 270 ADIHLPGKHNGEN--VLAAALMANALNLPETAIRQAAADFRGLPHRLQWVAR-VGGVDYY 326
Query: 273 DDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
DDSK TNL A+ + L G V++LGG AK
Sbjct: 327 DDSKGTNLGASLRAIQALPG-PLVLILGGDAK 357
>gi|225850179|ref|YP_002730413.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Persephonella
marina EX-H1]
gi|225646272|gb|ACO04458.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Persephonella
marina EX-H1]
Length = 419
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 135/275 (49%), Gaps = 19/275 (6%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V+ E++F+ + S+ +AVTGT+GKST + ++ +A +GGN G P S+
Sbjct: 67 VVGEIEFSYRFFDGSV--IAVTGTDGKSTTSKLIHHIIGEE--KADIGGNYGTPFSDIV- 121
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
S+ K V+E+SS+Q+ + F P ++V LN PDHL+ HK + +Y L+K
Sbjct: 122 -------SEGK-DTVVLELSSFQI-YSTEMFRPDIAVFLNFYPDHLDWHKKLLHYRLSKY 172
Query: 148 HLFSHMVNTKLGLLPFGNQHL-NEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGV 206
LF +M +L F +Q + N KG R+ + + P + + G
Sbjct: 173 RLFRNMKEEDPAVLNFDDQVVRNTPKKGKRYYFS-LSPLPDNLEGAYYDGSEIVLKINGF 231
Query: 207 VSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDI 266
+ L ++ + G HN N + A V G+D E + ++ + PHRM+ V I
Sbjct: 232 KFKFGLSDIHLKGIHNIQN--IMASVVTAYIYGIDPETIEERLKSFKPLPHRMEYVGS-I 288
Query: 267 QGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGG 301
GV + +DSKAT ++A + G + +++ GG
Sbjct: 289 NGVDFYNDSKATTVQAVKKAVQSFDGKRVILITGG 323
>gi|313891490|ref|ZP_07825103.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Dialister
microaerophilus UPII 345-E]
gi|313120067|gb|EFR43246.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Dialister
microaerophilus UPII 345-E]
Length = 449
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/284 (34%), Positives = 148/284 (52%), Gaps = 32/284 (11%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V+SE++ A + SI LAVTGTNGK+T +G ML + G + V GNLG LS+ A
Sbjct: 91 VISEIELAFCITKASI--LAVTGTNGKTTTTKLLGLMLKNSGKKFAVAGNLGVSLSDKA- 147
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
L K + EVSS+Q+E K F P + +LN+TPDHLERH TM+ Y K
Sbjct: 148 ---DLIDEKS---IIAAEVSSFQLEFI-KNFKPKAAAILNITPDHLERHHTMEAYVQAKA 200
Query: 148 HLFSHMVNTKLGLLPFGNQHLNE----AIKGHRFNLAWI------GAFPGVKIDTEAKTA 197
+F +M LL +++ NE A K L I GAF +D E
Sbjct: 201 RIFENMNFENCILLNADDKYTNELTEMANKHTNVCLFSIQKNIDNGAF----LDGEELVI 256
Query: 198 SFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPH 257
S++ + + + ++ +++ G+ NY NA A S L G+ +EA+ + ++ + PH
Sbjct: 257 SYKGNKINICN---INELQIKGKQNYANALAA--SFLAFFSGISLEAIRAALKEFKGLPH 311
Query: 258 RMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGG 301
R++ V R + + + +DSKATN +A+ G+ K VIL+ G
Sbjct: 312 RIEFV-RKFKDINYYNDSKATNTDASIKGMEAF--DKPVILIAG 352
>gi|381153305|ref|ZP_09865174.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Methylomicrobium
album BG8]
gi|380885277|gb|EIC31154.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Methylomicrobium
album BG8]
Length = 456
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/302 (30%), Positives = 146/302 (48%), Gaps = 29/302 (9%)
Query: 13 LKATGLACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEA 72
L +A + +G ++S++D A I+A+TG+NGKSTV T +G+M G
Sbjct: 94 LTEPAIAQAIANGSVLVSDIDLFA--CSTHAPIVAITGSNGKSTVTTMLGEMAKTSGKLV 151
Query: 73 FVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDH 132
VGGNLG AA + P+ + V+E+SS+Q+E V+ VLN++ DH
Sbjct: 152 GVGGNLGT----AALELLDTPA-----DLFVLELSSFQLE-RTTVLNAAVATVLNISADH 201
Query: 133 LERHKTMKNYALTKCHLFS----HMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGV 188
L+RH+ ++ YA K +F ++N P N + + + +++ F
Sbjct: 202 LDRHRDVEEYAAVKQRIFDGNGVMVINAD---DPRVNAMRRKGRRTYAYSIKEAADF--- 255
Query: 189 KIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNST 248
AK E G + L + + GRH + A A LG +G++ EA+
Sbjct: 256 ---ALAKIKGVECLVYGGKKLMALSELPLEGRH--NAANALAALALGTAVGLNPEAMCDA 310
Query: 249 IEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNG 308
+ R PHRMQ V + I VTW++DSKATN+ A C + K ++L GG AK +
Sbjct: 311 LRRFRGLPHRMQKVAK-IDEVTWINDSKATNIGA-CVAALQGYERKVILLAGGDAKGADM 368
Query: 309 QE 310
+E
Sbjct: 369 RE 370
>gi|261379336|ref|ZP_05983909.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Neisseria
subflava NJ9703]
gi|284797775|gb|EFC53122.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Neisseria
subflava NJ9703]
Length = 445
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 143/289 (49%), Gaps = 30/289 (10%)
Query: 23 QSGKRVMSELDFAAQVI-PRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
Q+G RV+ +++ A ++ R K++A+TG+NGK+TV + VG + G++ + GN+G P
Sbjct: 89 QNGGRVLGDIELLAGIVNRRGDKVIAITGSNGKTTVTSLVGYLCIKCGLDTVIAGNIGTP 148
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
+ EA L K + V+E+SS+Q+E + PT + VLN++ DHL+R+ + +
Sbjct: 149 VLEA-----ELQREGKKADMWVLELSSFQLE-NTESLRPTAATVLNISEDHLDRYDDLLD 202
Query: 142 YALTKCHLFS----HMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTA 197
YA TK +F ++N + A+K + W E +T
Sbjct: 203 YAHTKAKIFRGDGVQVLNA--------DDAFCRAMKRAGREVKWFSLEHKADFWLERETG 254
Query: 198 SFEVPAVGVVSQLQLHNMKVMGRHNYHN--AAVAALSVLGLDIGVDVEALNSTIEILRTP 255
+ G + ++ + G HN N AA+A +GL EAL ++ +
Sbjct: 255 CLK---QGNEDLIATQDIPLQGLHNAANVMAAIALCEAVGL----PREALLEHVKTFQGL 307
Query: 256 PHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
PHR++ + GV ++DDSK TN+ AT + L+ + ++LGG K
Sbjct: 308 PHRVEKIGEK-NGVVFIDDSKGTNVGATAAAIAGLQ-NPLFVILGGMGK 354
>gi|429745406|ref|ZP_19278824.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Neisseria sp.
oral taxon 020 str. F0370]
gi|429160026|gb|EKY02508.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Neisseria sp.
oral taxon 020 str. F0370]
Length = 445
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 150/292 (51%), Gaps = 26/292 (8%)
Query: 18 LACLLQSGKRVMSELDFAAQVI-PRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGG 76
+A Q+G RV+ +++ A ++ R K++A+TG+NGK+TV + VG + G++ + G
Sbjct: 84 IAAFKQNGGRVLGDVEILAHILNARGDKVIAITGSNGKTTVTSLVGHLCRQSGLDTVIAG 143
Query: 77 NLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERH 136
N+G P+ EA + K V V+E+SS+Q+E + P + VLN++ DHL+R+
Sbjct: 144 NIGTPVLEA-----EMQRGGKKADVWVLELSSFQLE-NTESLRPAAAAVLNISEDHLDRY 197
Query: 137 KTMKNYALTKCHLFS----HMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDT 192
+ +YA TK +F ++N + L A+K ++ W
Sbjct: 198 DDLLDYAHTKDKIFRGEGVQVLNA--------DDALCRAMKRAGRDVKWFSLENQADYWF 249
Query: 193 EAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEIL 252
+ T + + G++ + ++ + G HN N +AAL++ +G+ + L ++
Sbjct: 250 DRDTGRLKAASDGLID---IADIPLQGLHNAAN-VMAALALCEA-VGIPRDTLLPHVKTF 304
Query: 253 RTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
+ HR++ + + G+T++DDSK TN+ AT + L+ + ++LGG K
Sbjct: 305 KGLAHRVEKIG-EKNGITFIDDSKGTNVGATAAAVNGLQ-NPLFVILGGLGK 354
>gi|429759638|ref|ZP_19292136.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Veillonella
atypica KON]
gi|429179599|gb|EKY20846.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Veillonella
atypica KON]
Length = 454
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/282 (34%), Positives = 140/282 (49%), Gaps = 21/282 (7%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V+SE++ A V I L VTGTNGK+T T + Q++ G+ VGGN+G+ LSEAA+
Sbjct: 95 VVSEVELAYDVCKSPI--LGVTGTNGKTTTTTLLTQVMESTGLPVKVGGNIGDSLSEAAY 152
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
H P+ V E+SSYQ+E K FCP ++VLN+TPDHL RHKTM+NYA K
Sbjct: 153 HM-------PEGGYLVAELSSYQLETI-KSFCPLGAIVLNVTPDHLARHKTMENYAAAKA 204
Query: 148 HLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAF----PGVKIDTEAKTASFEVPA 203
+F + +L + + KG + I G + A + A
Sbjct: 205 RIFMNQNPENFVVLNDDDPIVRAMKKGAHSKVLSISQHHKVDSGAYFEGNTCYAVLDGKA 264
Query: 204 VGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVH 263
V+ +H + G HN N + A+ L +GV VE + TIE HR++ V
Sbjct: 265 TPVIDTEHIH---IKGSHNIEN--ILAVIALTYALGVKVEHIKHTIEQFHGVEHRLERV- 318
Query: 264 RDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKV 305
VT+ +DSKATN ++ L D ++L GG K+
Sbjct: 319 TTFHDVTFYNDSKATNTDSVVKAL-DAFDKPVILLAGGHDKM 359
>gi|323491031|ref|ZP_08096223.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Vibrio
brasiliensis LMG 20546]
gi|323314695|gb|EGA67767.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Vibrio
brasiliensis LMG 20546]
Length = 441
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/306 (31%), Positives = 148/306 (48%), Gaps = 42/306 (13%)
Query: 34 FAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALP 93
FA QV ++A+TG+NGKSTV + GQ+ G++ VGGN+G P +
Sbjct: 104 FAWQV---DKPVIAITGSNGKSTVTDWTGQVAKATGLKVGVGGNIGVPALDLLTLDAD-- 158
Query: 94 SSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSH- 152
+ V+E+SS+Q+E + P + LNLT DH++R++ M++Y K +F H
Sbjct: 159 -------LYVLELSSFQLETTSS-LAPKAAAFLNLTEDHMDRYQGMEDYRQAKLRIFDHA 210
Query: 153 ---MVNT--KLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVV 207
+VN K N+HL E F+L F + D E A+
Sbjct: 211 QSCIVNAEDKQTYPDQNNKHLVE------FSLTDSTQFSVIDCD------GIEYLAMNGK 258
Query: 208 SQLQLHNMKVMGRHNYHNAAV--AALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRD 265
+ + ++GRHN NA V A LS +G+DI ++AL S + HR Q+V D
Sbjct: 259 QIIPAAELSLVGRHNVANALVVLALLSQVGVDIEKGLDALKSYNGL----THRCQVV-AD 313
Query: 266 IQGVTWVDDSKATNLEATCTGLMDLK-GHKCVILLGGQAKVLNGQESNGFEKLIEPLNHH 324
+G+ WV+DSKATN+ +T L L+ +L+GG K G + + +++ L+
Sbjct: 314 NRGIKWVNDSKATNVASTMAALAGLELAGTLYLLVGGMGK---GADFSQLAPVLDKLDLQ 370
Query: 325 RCVITE 330
C E
Sbjct: 371 LCCFGE 376
>gi|229815102|ref|ZP_04445439.1| hypothetical protein COLINT_02144 [Collinsella intestinalis DSM
13280]
gi|229809332|gb|EEP45097.1| hypothetical protein COLINT_02144 [Collinsella intestinalis DSM
13280]
Length = 468
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 146/286 (51%), Gaps = 18/286 (6%)
Query: 24 SGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLS 83
+ ++M E +FA + P + A+TGTNGK+TV + ++L G+++ GN+GN
Sbjct: 93 ASSQIMGEPEFAWLLSPE--RWCAITGTNGKTTVTSLTDELLRASGLDSVAVGNIGN--- 147
Query: 84 EAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYA 143
A H + + + + V E+SSYQ+ + F P V+V+LNL+PDHL H++ +NYA
Sbjct: 148 -APIHEV---DRREEGEWFVAELSSYQLAT-TEAFHPRVAVLLNLSPDHLAWHRSHENYA 202
Query: 144 LTKCHLFSHMVNTKLGLLPFGNQ----HLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASF 199
L K +F +M + + ++ ++ +L+ R L A G +
Sbjct: 203 LAKIRMFKNMDDGDIAIVNVEDEGLSPYLDRICGPGRRVLHLGFADDGAADAAFVRDDVL 262
Query: 200 EVPAVGVVSQL-QLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHR 258
V G L ++ ++++G HN NA A+ + L G V + S + + PHR
Sbjct: 263 TVRMAGDEHALVRVDELRIVGAHNVLNALAASAAALA--CGASVTGVCSGLREFKPLPHR 320
Query: 259 MQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
++ V + GV +V+DSKATN +A T L G + V+LLGG K
Sbjct: 321 LEPVDT-VDGVRYVNDSKATNTDAVLTALAAFDGARIVLLLGGSDK 365
>gi|145627896|ref|ZP_01783697.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Haemophilus
influenzae 22.1-21]
gi|145639344|ref|ZP_01794950.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Haemophilus
influenzae PittII]
gi|144979671|gb|EDJ89330.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Haemophilus
influenzae 22.1-21]
gi|145271647|gb|EDK11558.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Haemophilus
influenzae PittII]
gi|309751218|gb|ADO81202.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Haemophilus
influenzae R2866]
Length = 437
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 160/333 (48%), Gaps = 46/333 (13%)
Query: 5 WLFLLEFQLKATGLA-------CLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTV 57
WL + + + GLA L++G V+ +++ + + I + +TG+NGKSTV
Sbjct: 62 WLLESDMIVISPGLAVKTPEIQTALKAGVEVIGDIELFCRTATKPI--VGITGSNGKSTV 119
Query: 58 VTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY 117
T V +M G++ +GGN+G P AL ++ V+E+SS+Q+E
Sbjct: 120 TTLVYEMAKAAGVKVGMGGNIGIP---------ALSLLNEDCELYVLELSSFQLETTYSL 170
Query: 118 FCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGL------LPFGNQHLNEA 171
V+ VLN+T DH++R+ +++Y K ++ N K+G+ L FG NE
Sbjct: 171 KAAAVT-VLNVTEDHMDRYMDLEDYRQAKLRIYH---NAKVGVLNNEDRLTFGE---NEN 223
Query: 172 IKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAAL 231
H + A A +K + + + + L ++GRHNY N + A
Sbjct: 224 QAKHTVSFAENSADYWLKTENGKQYLMVKDEVI-----LPCEEATLVGRHNYMN--ILAA 276
Query: 232 SVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLK 291
+ L IG++++++ + + + HR Q+VH+ G+ W++DSKATN+ +T L L
Sbjct: 277 TALAQAIGINLDSIRTALRHFKGLDHRFQLVHQ-ANGIRWINDSKATNVGSTVAALAGLY 335
Query: 292 GH-KCVILLGGQAKVLNGQESNGFEKLIEPLNH 323
K +LLGG K + F +L E +N
Sbjct: 336 IEGKLHLLLGGDGKGAD------FSELAELINQ 362
>gi|320352820|ref|YP_004194159.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Desulfobulbus
propionicus DSM 2032]
gi|320121322|gb|ADW16868.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Desulfobulbus
propionicus DSM 2032]
Length = 458
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/303 (31%), Positives = 143/303 (47%), Gaps = 54/303 (17%)
Query: 23 QSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPL 82
+ G V+ EL AA ++ ++AVTG+NGK+TV + +G++L G FVGGN+G PL
Sbjct: 92 KQGLPVLGELALAAGQY--AVPVIAVTGSNGKTTVTSLIGELLRASGKNPFVGGNIGTPL 149
Query: 83 SEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNY 142
A P + V+E+SS+Q+++ F P + ++LN++PDHL+RH +++ Y
Sbjct: 150 ----LDYFADPQG---YDAVVLELSSFQLDLAGA-FRPDIGLLLNISPDHLDRHGSLEAY 201
Query: 143 ALTKCHLFSHM-------------------VNTKLGLLPFGN-QHLNEAIKGHRFNLAWI 182
L K +LF H +N ++G FG + I R L +
Sbjct: 202 TLAKQNLFRHQQLGDRAILGADDPVAAATPLNPEVGRFTFGRAEGCTARIADGRILLTLM 261
Query: 183 -GAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVD 241
GA G TE V+S LH+ N NAA A L+V G +
Sbjct: 262 AGALSG---KTEY-----------VLSGTTLHSSV-----NQLNAAAAILAV--TLAGCE 300
Query: 242 VEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGG 301
+ + PPHRM V I GV +++DSKATN+ A L + V++ GG
Sbjct: 301 QAGIAEGLRRFVPPPHRMAEVA-TIDGVRFINDSKATNIGALEAALAGCE-SPVVLIAGG 358
Query: 302 QAK 304
+ K
Sbjct: 359 RDK 361
>gi|298531031|ref|ZP_07018432.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Desulfonatronospira
thiodismutans ASO3-1]
gi|298509054|gb|EFI32959.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Desulfonatronospira
thiodismutans ASO3-1]
Length = 433
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 136/284 (47%), Gaps = 38/284 (13%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
L +G+ V+SEL+ A+ I S ++AVTGTNGK+T + ++L G F GGN+G
Sbjct: 92 LCPAGQTVISELELASWFI--SEPVIAVTGTNGKTTTCMLIQKVLEKAGRRVFTGGNIGT 149
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMK 140
PLS+ H + S + + V+EVSS+Q++ + F P V V+LN + +HL+ H++
Sbjct: 150 PLSD---HVL----SGKRADILVLEVSSFQLQGCSG-FTPHVGVLLNFSANHLDHHESED 201
Query: 141 NYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFE 200
Y K LF+ L +LP + E+ + N+ + A T F
Sbjct: 202 EYFRAKMQLFARQGPMDLAVLPLDLRARVESDFRIKSNITYF-----------APTGRFH 250
Query: 201 VPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQ 260
P + G HN N A L+ +D+ ++ + + PPHR +
Sbjct: 251 CPG-------------LPGAHNQANMEAAMLACGFVDVSRNI--FDQALLEFVPPPHRQE 295
Query: 261 IVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
+ +D +GV +++DSKAT LEA L +L GG+ K
Sbjct: 296 VFLQD-KGVRYINDSKATTLEAMTAALKAFDS-PIRLLAGGRYK 337
>gi|385340654|ref|YP_005894526.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis G2136]
gi|416200857|ref|ZP_11619754.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis 961-5945]
gi|421556477|ref|ZP_16002392.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis 80179]
gi|433466620|ref|ZP_20424081.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis 87255]
gi|325142974|gb|EGC65331.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis 961-5945]
gi|325198898|gb|ADY94354.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis G2136]
gi|402337150|gb|EJU72400.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis 80179]
gi|432204730|gb|ELK60769.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis 87255]
Length = 445
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 144/294 (48%), Gaps = 40/294 (13%)
Query: 23 QSGKRVMSELDFAAQVI-PRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
Q+G RV+ +++ A ++ R K++A+TG+NGK+TV + VG + G++ + GN+G P
Sbjct: 89 QNGGRVLGDIELLADIVNRRGDKVIAITGSNGKTTVTSLVGYLCIKCGLDTVIAGNIGTP 148
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
+ EA + K V V+E+SS+Q+E + PT + VLN++ DHL+R+ + +
Sbjct: 149 VLEAEWQ-----REGKKADVWVLELSSFQLE-NTESLRPTAATVLNISEDHLDRYDDLLD 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLN------EAIKGHRFNLAWIGAFPGVKIDTEAK 195
YA TK +F G Q LN A+K + W E +
Sbjct: 203 YAHTKAKIFRGD----------GVQVLNSDDVFCRAMKRAGREVKWFSLEHEADFWLERE 252
Query: 196 TASFEVPAVGVVSQLQLHNMKVMGRHNYHN--AAVAALSVLGLDIGVDVEALNSTIEILR 253
T + G + ++ + G HN N AAVA +GL N +E ++
Sbjct: 253 TGRLK---QGNEDLIATQDIPLQGLHNATNVMAAVALCEAVGL-------PRNELLEHVK 302
Query: 254 T---PPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
T PHR++ + + GV ++DDSK TN+ AT + L+ + ++LGG K
Sbjct: 303 TFQGLPHRVEKIGKK-NGVVFIDDSKGTNVGATAAAITGLQ-NPLFVILGGMGK 354
>gi|114798168|ref|YP_761703.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Hyphomonas
neptunium ATCC 15444]
gi|114738342|gb|ABI76467.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Hyphomonas
neptunium ATCC 15444]
Length = 471
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/274 (31%), Positives = 134/274 (48%), Gaps = 38/274 (13%)
Query: 35 AAQVIPRSI--KILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP-LSEAAFHCIA 91
A Q +P K++AVTGTNGKST +G +L G +A VGGN+G L AA H A
Sbjct: 106 AVQALPERARPKVVAVTGTNGKSTTTALIGHILKQAGRDARVGGNIGTGVLDLAALHSNA 165
Query: 92 LPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFS 151
+ V+E+SSYQ+++ C VSV +NL+PDHL+RH M Y K +F
Sbjct: 166 ---------IYVLELSSYQLDLVKSLHC-DVSVFMNLSPDHLDRHGGMDGYQAAKMRIFQ 215
Query: 152 HMVNTKLGLLPFGNQHLNE-----AIKGHR--------FNLA-WIGAFPGVKIDTEAKTA 197
+ + + ++ F + + + KG + + L I A G D ++ A
Sbjct: 216 NQTDKNVAVIGFDDIYTQSIAIGLSAKGPQKVVQISSTYTLGKGISAVDGRLYDNQSGKA 275
Query: 198 SFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPH 257
F VG + + ++GRHN+ NAA A + L G+D + + + H
Sbjct: 276 EF----VGKLDECP----ALIGRHNHQNAAAAYAACRAL--GLDPATIMAGLRTFPGLAH 325
Query: 258 RMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLK 291
RM+ V ++ G+ +++DSKATN +A L K
Sbjct: 326 RMEAVG-ELDGIRFINDSKATNAQAAEQALRSFK 358
>gi|408418665|ref|YP_006760079.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase MurD
[Desulfobacula toluolica Tol2]
gi|405105878|emb|CCK79375.1| MurD: UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase
[Desulfobacula toluolica Tol2]
Length = 451
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 149/288 (51%), Gaps = 23/288 (7%)
Query: 23 QSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPL 82
+G + ELD ++ + I+A+TGTNGK+T T +G ML G+ FVGGN+G PL
Sbjct: 89 DNGVGITGELDIFSRY--NDLPIIAITGTNGKTTTTTLIGDMLKACGMNPFVGGNIGTPL 146
Query: 83 SEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNY 142
+ H + K + V E+SS+Q+++ K F P V V+LN++ DHL+R+ + Y
Sbjct: 147 VD---HLM----DKKNTDIIVAEISSFQLDLA-KRFKPDVGVLLNISEDHLDRYDSYSAY 198
Query: 143 ALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVP 202
+K +F H + ++ NQ +NE K + + I AF K A+
Sbjct: 199 KDSKWRIFKHQDASDKAII---NQSVNEFDKKSQKLKSMIFAFSSQKSIQTQWGANIGSD 255
Query: 203 AVGVVSQLQLHNMK------VMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPP 256
+ ++++ H +K + GRHN N A A L+ LG G + + ++ +
Sbjct: 256 TIDIITKNVSHKIKAAQVKGLQGRHNRENIAAAVLACLGA--GAKMSGILKGLKTFKNLA 313
Query: 257 HRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
HR++ + + I G+++ +DSKATN +A L + + +++LGG+ K
Sbjct: 314 HRIEFI-KTINGISFYNDSKATNTDAVIRAL-ECFDNNIILILGGREK 359
>gi|393719279|ref|ZP_10339206.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Sphingomonas
echinoides ATCC 14820]
Length = 377
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 139/287 (48%), Gaps = 40/287 (13%)
Query: 24 SGKRVMSELDFAAQVIPR--SIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
+G ++ +++ AQ P K++ VTGTNGKST V+ + +L G+ + +GGN+G P
Sbjct: 37 AGVPIIGDIELFAQARPALPPHKVVGVTGTNGKSTTVSLIDHILQTAGVPSRLGGNIGLP 96
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
+ E P V V+E+SSYQ+++ C V+V+LN+TPDHL+R+
Sbjct: 97 ILEQ--------EPLPDGGVYVLELSSYQIDLTQTLDC-DVAVLLNITPDHLDRYDGFDA 147
Query: 142 YALTKCHLFSHMVNTKLGLLPFGN---QHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTAS 198
YA +K LF+ T ++ G+ + ++ +L I PGV +D
Sbjct: 148 YAASKARLFAMQSATHAAIIGIGDTPSAQIARSLSARAEHLTKIA--PGVCMD------- 198
Query: 199 FEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHR 258
Q + G HN NA A L GV +++ ++ HR
Sbjct: 199 ------------QSRWPSLQGPHNAQNALAAIAVAQAL--GVPEAVIDAALQSFVGLAHR 244
Query: 259 MQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKV 305
M+ V R ++GVT+V+DSKATN E+T L + +LGG+AK
Sbjct: 245 MERV-RVLRGVTYVNDSKATNPESTAPALAAFG--RIHWILGGKAKA 288
>gi|206895540|ref|YP_002247022.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Coprothermobacter
proteolyticus DSM 5265]
gi|206738157|gb|ACI17235.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Coprothermobacter
proteolyticus DSM 5265]
Length = 441
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 104/302 (34%), Positives = 148/302 (49%), Gaps = 29/302 (9%)
Query: 11 FQLKATGLACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGI 70
F L L L G V+ EL+ + R +AVTGTNGK+T +F+G +L G
Sbjct: 73 FSLDHPVLRSLKDRGVPVVGELELSFDA-SRWNYWIAVTGTNGKTTTTSFIGHLLRTAGF 131
Query: 71 EAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTP 130
VGGN+G P++ + P S+ + V EVSS+Q+E + F P V+V LNLTP
Sbjct: 132 NVVVGGNIGVPVTS----FLNEPISE---TIIVAEVSSFQLETVHT-FRPQVAVFLNLTP 183
Query: 131 DHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKI 190
DHL+RH +M+NY TK +F LG+L ++ + I + G G
Sbjct: 184 DHLDRHGSMENYFQTKARIFKLQQPQDLGVLNAEDRWASSLIGSLKSRTLAFGIEKG--- 240
Query: 191 DTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHN--AAVAALSVL---GLDIGVDVEAL 245
D V V S + ++K+ GRHN N A VAA L G D G
Sbjct: 241 DVHWSEGFLNVLGTTVAS---VSDVKLRGRHNLANIAAGVAACYHLLPDGFDFG------ 291
Query: 246 NSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKV 305
S I P HR++ V R + GV++ DDSKATN ++T L + V++LGG+ K
Sbjct: 292 -SAISQFCAPEHRIEFV-RSVGGVSFYDDSKATNPDSTIVALEAFQ-EPVVVILGGRNKG 348
Query: 306 LN 307
++
Sbjct: 349 MD 350
>gi|410478394|ref|YP_006766031.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Leptospirillum
ferriphilum ML-04]
gi|406773646|gb|AFS53071.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Leptospirillum
ferriphilum ML-04]
Length = 391
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/302 (31%), Positives = 151/302 (50%), Gaps = 35/302 (11%)
Query: 26 KRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEA 85
+ VM E+++A+ ++ ++AV GTNGKST + L G F+GGN G PLS+
Sbjct: 4 RNVMGEMEWASSWT--AVPLVAVGGTNGKSTTSALLAHFLEAAGERVFLGGNFGTPLSDM 61
Query: 86 AFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALT 145
S P VAVVE+SS+Q E F P V+++LN+TPDHL+R+ ++ +Y
Sbjct: 62 VLS--ERRGSSPLPTVAVVELSSFQAETMG-IFRPVVNLLLNITPDHLDRYLSVDHYRNA 118
Query: 146 KCHLFSHMVNTKLGLL---PFGNQHLNEAIKGHRFNLAWI----GAFP----GVKIDTEA 194
K + F M +L P + + R LAW G+ P G+ ++ +A
Sbjct: 119 KWNAFQTMEKESFTVLNRDPACGVYPPFSPISSR--LAWFYGSKGSCPDRTGGLILEGDA 176
Query: 195 KTASFE----VPAVGVVSQLQLHNMKVMGRHNYHNAAVAAL-SVLGLD-IGVDVEALNST 248
+A+ + +P + L + G N N A + L +VL L G E + +
Sbjct: 177 LSATLDGIEGLPPI----SWNLEKFPLEGMGNRQNLAASLLGAVLYLKATGKHPEQVTTV 232
Query: 249 IE----ILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVI--LLGGQ 302
+E R PHRM++V + +G+ +++DSKATN++AT L GH + +LGG+
Sbjct: 233 LEEAAASFRGLPHRMEVVG-EWKGIRFINDSKATNVDATRLALEGYAGHSPFVHLILGGR 291
Query: 303 AK 304
K
Sbjct: 292 DK 293
>gi|374301716|ref|YP_005053355.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Desulfovibrio
africanus str. Walvis Bay]
gi|332554652|gb|EGJ51696.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Desulfovibrio
africanus str. Walvis Bay]
Length = 435
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 133/276 (48%), Gaps = 39/276 (14%)
Query: 26 KRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEA 85
++V+SEL+ A+ + S ILAVTGTNGK+T V+ G +L G FVGGN+G PLSE
Sbjct: 98 RKVVSELELASWFV--SEPILAVTGTNGKTTTVSLCGHILRESGKRVFVGGNIGTPLSEY 155
Query: 86 AFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALT 145
+ + V+EVSS+Q++ + F P V V+LN + +HL+ H++M+ Y
Sbjct: 156 LL-------GGERADILVLEVSSFQLQ-NCRTFKPHVGVLLNFSANHLDYHESMEEYLEA 207
Query: 146 KCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVG 205
K LF+ L + P ++ + ++ F T+AK +
Sbjct: 208 KLKLFARQTEQDLAIAPL---NMKDELEARGF--------------TKAKRVYY------ 244
Query: 206 VVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRD 265
V + +++G HN N A L+ GV + + + + HR++ V +
Sbjct: 245 -VPSNRFEGARLLGVHNKANMEAAWLACRAF--GVSDDQARAAVMSFKPLSHRIEPVI-E 300
Query: 266 IQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGG 301
GV +VDDSKAT ++A + + V LL G
Sbjct: 301 TGGVLFVDDSKATTIDAMAAAITAF--DRPVRLLAG 334
>gi|94501898|ref|ZP_01308408.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Oceanobacter sp.
RED65]
gi|94425951|gb|EAT10949.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Oceanobacter sp.
RED65]
Length = 446
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 148/290 (51%), Gaps = 30/290 (10%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
+ +G V+S++ A+ + I+A+TG+N KSTV T VG+M G++A VGGNLG P
Sbjct: 91 IDAGVPVVSDIQVFAEA--ANAPIIAITGSNAKSTVTTLVGEMAKQCGLKAAVGGNLGTP 148
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
AL V V+E+SS+Q+E ++ V+ VLN++PDHL+R+ + +
Sbjct: 149 ---------ALELLNSDIDVYVMELSSFQLE-ATEHLNAKVATVLNISPDHLDRYDSYEG 198
Query: 142 YALTKCHLFS----HMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTA 197
Y TK +F+ ++N L + E I F++ GA +D A+
Sbjct: 199 YYQTKYKIFNGCEKAVINLDDNLAQPKTLNCPEQIG---FSIDGKGA--DFVLDRTAQPW 253
Query: 198 SFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPH 257
V ++S QL K+ G HNY N A+AAL+ LG G+D++ + ++ H
Sbjct: 254 QLIVEGDALLSVDQL---KIKGLHNYSN-ALAALA-LGHGFGLDMDGMLKALKSFPGLDH 308
Query: 258 RMQIVHRDIQGVTWVDDSKATNL---EATCTGLMDLKGHKCVILLGGQAK 304
R Q + + + V + +DSK TN+ EA GL + V++LGG K
Sbjct: 309 RCQWI-KQVDEVDFYNDSKGTNVGATEAALKGLGPEYAKRIVLMLGGVGK 357
>gi|20808074|ref|NP_623245.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
[Thermoanaerobacter tengcongensis MB4]
gi|254479543|ref|ZP_05092860.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Carboxydibrachium
pacificum DSM 12653]
gi|30316069|sp|Q8R9G4.1|MURD_THETN RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|20516656|gb|AAM24849.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Thermoanaerobacter
tengcongensis MB4]
gi|214034511|gb|EEB75268.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Carboxydibrachium
pacificum DSM 12653]
Length = 450
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 99/306 (32%), Positives = 156/306 (50%), Gaps = 48/306 (15%)
Query: 25 GKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSE 84
G ++ E++ A ++ I A+TGTNGK+T + +G+M + G + +V GN+G PL
Sbjct: 92 GLEILGEVELAYRL--SKAPIYAITGTNGKTTTTSLLGEMFRNAGRKVYVAGNIGYPLIY 149
Query: 85 AAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYAL 144
AA A P+ V E+SS+Q+E K F P +S ++N+TPDHL+RHKT +NYA
Sbjct: 150 AALE--AGPNDH-----IVAEISSFQLETV-KEFRPKISCIINITPDHLDRHKTFENYAN 201
Query: 145 TKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAV 204
K +F + + +L + + + W G+K +AK F V
Sbjct: 202 IKGRIFENQREEEYVVLNYDDP------------VTW-----GLKERAKAKVFPFSRKKV 244
Query: 205 ----GVVSQ--LQLHNMKVM--------GRHNYHNAAVAALSVLGLDIGVDVEALNSTIE 250
V + L L N KV+ G HN N A+AA SV L G++V+A+ +T+
Sbjct: 245 LENGAYVKEGFLYLQNKKVIKVEDIYIPGEHNLEN-ALAASSVAYLS-GIEVDAIETTLR 302
Query: 251 ILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQE 310
+ HR++ V +I+G+ + +DSK TN +A+ + LK V++ GG K G E
Sbjct: 303 TFKGVEHRIEFVA-EIEGIKFYNDSKGTNPDASIKAIQALK-TPIVLIAGGYDK---GSE 357
Query: 311 SNGFEK 316
+ F K
Sbjct: 358 FDEFVK 363
>gi|319776623|ref|YP_004139111.1| UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase [Haemophilus
influenzae F3047]
gi|329124136|ref|ZP_08252683.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Haemophilus
aegyptius ATCC 11116]
gi|317451214|emb|CBY87447.1| UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase [Haemophilus
influenzae F3047]
gi|327467561|gb|EGF13059.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Haemophilus
aegyptius ATCC 11116]
Length = 437
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 160/333 (48%), Gaps = 46/333 (13%)
Query: 5 WLFLLEFQLKATGLA-------CLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTV 57
WL + + + GLA +L++G V+ +++ + + I + +TG+NGKSTV
Sbjct: 62 WLLESDMIVISPGLAVKTPEIQTVLKAGVEVIGDIELFCRAATKPI--VGITGSNGKSTV 119
Query: 58 VTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY 117
T V +M G++ +GGN+G P AL ++ V+E+SS+Q+E
Sbjct: 120 TTLVYEMAKAAGVKVGMGGNIGIP---------ALSLLNEDCELYVLELSSFQLETTYS- 169
Query: 118 FCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGL------LPFGNQHLNEA 171
+ +LN+T DH++R+ +++Y K ++ N K+G+ L FG NE
Sbjct: 170 LKAAAATILNVTEDHMDRYMDLEDYRQAKLRIYH---NAKVGVLNNEDRLTFGE---NEN 223
Query: 172 IKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAAL 231
H + A A +K + + + + L ++GRHNY N + A
Sbjct: 224 QAKHTVSFAENSADYWLKTENGKQYLMVKDEVI-----LPCEEATLVGRHNYMN--ILAA 276
Query: 232 SVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLK 291
+ L IG++++++ + + + HR Q+VH+ G+ W++DSKATN+ +T L L
Sbjct: 277 TALAQAIGINLDSIRTALRHFKGLDHRFQLVHQ-ANGIRWINDSKATNVGSTVAALAGLY 335
Query: 292 GH-KCVILLGGQAKVLNGQESNGFEKLIEPLNH 323
K +LLGG K + F +L E +N
Sbjct: 336 IEGKLHLLLGGDGKGAD------FSELAELINQ 362
>gi|123966762|ref|YP_001011843.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
[Prochlorococcus marinus str. MIT 9515]
gi|158512733|sp|A2BY75.1|MURD_PROM5 RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|123201128|gb|ABM72736.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Prochlorococcus
marinus str. MIT 9515]
Length = 477
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 142/294 (48%), Gaps = 32/294 (10%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
L + G V+ E++ A + + ++I + +TGTNGK+TV + +L + A GN+G
Sbjct: 99 LKEKGIEVLGEVNIAWESL-KNINWIGITGTNGKTTVTHLLSHILRTNNLLAPFAGNIGT 157
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMK 140
PL + A+ ++ S + VA E+SSYQ+EI P + + T DHL+RHKT+
Sbjct: 158 PLCKIAY---SIKSKNIDWLVA--ELSSYQIEIATLCIKPKIGIWTTFTADHLDRHKTLD 212
Query: 141 NYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFE 200
NY K L ++ + + + HL E K G+ I T +K + +
Sbjct: 213 NYFKIKNSLLKQ---SEFRIYNYDDIHLRENFKSLS---------KGIWITTSSKQSDLD 260
Query: 201 VPAVGVVSQ----------LQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIE 250
+ ++ L L N K+ G HN N +A + IG+ E + + +
Sbjct: 261 HCDYWINNEDFIVERQENLLSLKNFKLKGNHNTQNLLLAIAA--ARKIGLSPEKIKNALL 318
Query: 251 ILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
PHRM+ +++ + ++DSKATN +++ G+ +KG +I+ GG+ K
Sbjct: 319 SYEQLPHRMETIYQS-NKLEIINDSKATNFDSSTAGIKAIKGAP-IIISGGKLK 370
>gi|145633134|ref|ZP_01788866.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Haemophilus
influenzae 3655]
gi|145635587|ref|ZP_01791285.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Haemophilus
influenzae PittAA]
gi|229844909|ref|ZP_04465047.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Haemophilus
influenzae 6P18H1]
gi|144986360|gb|EDJ92939.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Haemophilus
influenzae 3655]
gi|145267149|gb|EDK07155.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Haemophilus
influenzae PittAA]
gi|229812290|gb|EEP47981.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Haemophilus
influenzae 6P18H1]
Length = 437
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 159/333 (47%), Gaps = 46/333 (13%)
Query: 5 WLFLLEFQLKATGLA-------CLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTV 57
WL + + + GLA +L++G V+ +++ + + I + +TG+NGKSTV
Sbjct: 62 WLLESDMIVISPGLAVKTPEIQTVLKAGVEVIGDIELFCRAATKPI--VGITGSNGKSTV 119
Query: 58 VTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY 117
T V +M G++ +GGN+G P AL ++ V+E+SS+Q+E
Sbjct: 120 TTLVYEMAKAAGVKVGMGGNIGIP---------ALSLLNEDCELYVLELSSFQLETTYS- 169
Query: 118 FCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGL------LPFGNQHLNEA 171
+ +LN+T DH++R+ +++Y K ++ N K+G+ L FG NE
Sbjct: 170 LKAAAATILNVTEDHMDRYMDLEDYRQAKLRIYH---NAKVGVLNNEDRLTFGE---NEN 223
Query: 172 IKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAAL 231
H + A A +K + + + + L ++GRHNY N + A
Sbjct: 224 QAKHTVSFAENSADYWLKTENGKQYLMVKDEVI-----LPCEEATLVGRHNYMN--ILAA 276
Query: 232 SVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLK 291
+ L IG++++++ + + + HR Q+ H+ G+ W++DSKATN+ +T L L
Sbjct: 277 TALAQAIGINLDSIRAALRHFKGLDHRFQLAHQ-ANGIRWINDSKATNVGSTVAALAGLY 335
Query: 292 GH-KCVILLGGQAKVLNGQESNGFEKLIEPLNH 323
K +LLGG K N F +L E +N
Sbjct: 336 IEGKLHLLLGGDGKGAN------FSELAELINQ 362
>gi|239907965|ref|YP_002954706.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Desulfovibrio
magneticus RS-1]
gi|239797831|dbj|BAH76820.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Desulfovibrio
magneticus RS-1]
Length = 442
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 125/258 (48%), Gaps = 37/258 (14%)
Query: 25 GKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSE 84
G +V+SEL+ A+ P I+AVTG+NGK+T V + +L G F GGN+G PLS+
Sbjct: 99 GAQVVSELELASWFTPE--PIVAVTGSNGKTTTVMLISALLEAAGRRVFTGGNIGTPLSD 156
Query: 85 AAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYAL 144
H + S +P V V+EVSS+Q+++ K F P V+V+LN +HL+ H + Y
Sbjct: 157 ---HVL---SEEPA-DVVVLEVSSFQLQL-TKTFRPKVAVLLNFAANHLDWHADLDEYLD 208
Query: 145 TKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAV 204
K +F+ ++ ++ L + + G F A + + A + F P
Sbjct: 209 AKLRIFATQRPDDTAIV---SEELRDLLSGRPFTRAGVTWY--------AAASGFLCP-- 255
Query: 205 GVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHR 264
++ G HN N A L+ GVD++ PHR+QI+
Sbjct: 256 -----------RLAGVHNQANMEAAYLACRAF--GVDIKLARQVFADFVPAPHRIQIIG- 301
Query: 265 DIQGVTWVDDSKATNLEA 282
+ GV +VDDSKAT + A
Sbjct: 302 EKGGVLFVDDSKATTVTA 319
>gi|410451668|ref|ZP_11305670.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Leptospira sp.
Fiocruz LV3954]
gi|410014434|gb|EKO76564.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Leptospira sp.
Fiocruz LV3954]
Length = 462
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/279 (31%), Positives = 135/279 (48%), Gaps = 22/279 (7%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V SE+D KI+ VTGT+GKST + +L + GGNLG P +
Sbjct: 89 VFSEIDLGRFFFKG--KIIGVTGTDGKSTTTSLTAHLLRKDFSDLREGGNLGTPFTSFCK 146
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
I+L AV+E+SSYQ++ N VSV LNL PDHLERH TM+NY K
Sbjct: 147 KPISL---------AVLELSSYQLDDSNPLHL-DVSVFLNLAPDHLERHTTMENYFQAKL 196
Query: 148 HLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVV 207
+ + + N L+ ++E IK NLA T A A + + +
Sbjct: 197 KI-ADLQNENHFLI------VSEKIKESILNLASFRCKLLSFGRTSASDAFLDENSSKIG 249
Query: 208 SQLQLHNMKVMGRHNYHNAAVAALSVLGLD-IGVDVEALNSTIEILRTPPHRMQIVHRDI 266
+ ++++ HN A S+L + IG E++ + I + R PHR QI +
Sbjct: 250 TSKFVYDISGFHLPGTHNGENLAASILAAEAIGGKPESIQAQIPLFRGLPHRFQIAG-EK 308
Query: 267 QGVTWVDDSKATNLEATCTGLMDLKG-HKCVILLGGQAK 304
QG+++++DSK+TNL + G+ K + ++LGG+ K
Sbjct: 309 QGISFINDSKSTNLHSMLAGMSTWKNLDRTCLILGGRPK 347
>gi|189220257|ref|YP_001940897.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Methylacidiphilum
infernorum V4]
gi|189187115|gb|ACD84300.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Methylacidiphilum
infernorum V4]
Length = 442
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 136/282 (48%), Gaps = 38/282 (13%)
Query: 26 KRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEA 85
++++S+ D P K + VTG+ GKST + + +L G +A++GGN+G P
Sbjct: 98 EKIVSQADIFLSFWPG--KTVGVTGSKGKSTTSSLIYHLLKEGGFKAYLGGNIGIP---- 151
Query: 86 AFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFC---PTVSVVLNLTPDHLERHKTMKNY 142
FH + K +AV+E+SSYQ+E +C P +++ LNL +HL H + + Y
Sbjct: 152 PFHLLPFADEK---AIAVLELSSYQLE-----YCKHSPAIALWLNLFHEHLNYHGSFEAY 203
Query: 143 ALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVP 202
A K H+ + G+Q L + PG+ + E K
Sbjct: 204 AQAKSHIGRFQSPKDYFIYDPGDQALELFLLSQE-------KMPGIPLPVEGKGR----- 251
Query: 203 AVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIV 262
SQ+ L + + GRHN NA AA + L +G+ EA++ + R PHR++ V
Sbjct: 252 -----SQVDLSRLGIPGRHNKKNALFAA--RVALLLGMPAEAISEALSSFRGLPHRLEYV 304
Query: 263 HRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
+ G+++ +DS +T EAT G+ + + +I +GGQ +
Sbjct: 305 -ATVGGISYYNDSISTVPEATLAGIEAIPSVRTLI-VGGQDR 344
>gi|325954319|ref|YP_004237979.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Weeksella virosa
DSM 16922]
gi|323436937|gb|ADX67401.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Weeksella virosa
DSM 16922]
Length = 443
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 149/280 (53%), Gaps = 17/280 (6%)
Query: 27 RVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAA 86
V+SE++FA++ KI+A+TG+NGK+T + + ++ G++ + GN+G ++
Sbjct: 88 EVISEIEFASRFTES--KIIAITGSNGKTTTTSLMYHIMKEAGLDVGLCGNIGKSFAQ-- 143
Query: 87 FHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK-TMKNYALT 145
L + P + V+E+SS+Q++ ++F P ++++LN+TPDHL+R++ YA +
Sbjct: 144 -----LVAEDP-HEYYVIEISSFQLD-DIRFFKPYIAIILNITPDHLDRYENNFDKYAHS 196
Query: 146 KCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIG-AFPGVKIDTEAKTASFEVPAV 204
K + + + + + ++ +NE IK + + K A FE+
Sbjct: 197 KFRITENQTDKEYFVYNVDDEKINELIKELKIKANKTSFSMKDKKQKAYANEKIFEIKDN 256
Query: 205 GVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHR 264
+ + ++ ++G+HN N+ AA + L I DV + ++ ++ HR++ V +
Sbjct: 257 DNSFLMPIADLGLIGKHNVSNSLAAATAANILKIRKDV--IKRSLSDFKSVEHRLENVLK 314
Query: 265 DIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
I G+ +++DSKATN+ AT L +K + + ++GG K
Sbjct: 315 -IGGIEFINDSKATNVNATYFALESMK-NPVIWIVGGTDK 352
>gi|16273062|ref|NP_439294.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Haemophilus
influenzae Rd KW20]
gi|260580220|ref|ZP_05848050.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Haemophilus
influenzae RdAW]
gi|1171072|sp|P45063.1|MURD_HAEIN RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|1574691|gb|AAC22791.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase (murD) [Haemophilus
influenzae Rd KW20]
gi|260093504|gb|EEW77437.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Haemophilus
influenzae RdAW]
Length = 437
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 159/333 (47%), Gaps = 46/333 (13%)
Query: 5 WLFLLEFQLKATGLA-------CLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTV 57
WL + + + GLA L++G V+ +++ + + I + +TG+NGKSTV
Sbjct: 62 WLLESDMIVISPGLAVKTPEIQTALKAGVEVIGDIELFCRAATKPI--VGITGSNGKSTV 119
Query: 58 VTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY 117
T V +M G++ +GGN+G P AL ++ V+E+SS+Q+E
Sbjct: 120 TTLVYEMAKAAGVKVGMGGNIGIP---------ALSLLNEDCELYVLELSSFQLETTYS- 169
Query: 118 FCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGL------LPFGNQHLNEA 171
+ VLN+T DH++R+ +++Y K ++ N K+G+ L FG NE
Sbjct: 170 LKAAAATVLNVTEDHMDRYMDLEDYRQAKLRIYH---NAKVGVLNNEDRLTFGE---NEN 223
Query: 172 IKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAAL 231
H + A A +K + + + + L ++GRHNY N + A
Sbjct: 224 QAKHTVSFAENSADYWLKTENGKQYLMVKDEVI-----LPCEEATLVGRHNYMN--ILAA 276
Query: 232 SVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLK 291
+ L IG++++++ + + + HR Q+VH+ G+ W++DSKATN+ +T L L
Sbjct: 277 TALAQAIGINLDSIRTALRHFKGLDHRFQLVHQ-ANGIRWINDSKATNVGSTVAALAGLY 335
Query: 292 GH-KCVILLGGQAKVLNGQESNGFEKLIEPLNH 323
K +LLGG K + F +L E +N
Sbjct: 336 IEGKLHLLLGGDGKGAD------FSELAELINQ 362
>gi|359408617|ref|ZP_09201085.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [SAR116 cluster
alpha proteobacterium HIMB100]
gi|356675370|gb|EHI47723.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [SAR116 cluster
alpha proteobacterium HIMB100]
Length = 451
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 136/280 (48%), Gaps = 35/280 (12%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V+SE++FA + P+ + +A+TGTNGKST G +L G A +GGN+G P++
Sbjct: 93 VISEVEFALRTSPQG-RWVAITGTNGKSTTTALTGHILRQAGKTAVIGGNIGAPVT---- 147
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
+LP + + +AV+E+SSYQ+E V V+LN+TPDHL+RH Y K
Sbjct: 148 ---SLP-EQTEDSIAVIELSSYQLET-TPSLRAAVRVILNITPDHLDRHGGWDGYVSAKQ 202
Query: 148 HLFSHMVNTKLGLLPFGNQHLNE--AIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVG 205
+ +L +L G Q L++ A + H+ + +++D + A
Sbjct: 203 AILDSATKDELVILGPG-QPLDDIAADQQHKTRI--------IRLDDDCLAEEDRQKA-- 251
Query: 206 VVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRD 265
Q N + G HN N A A L + ++G+ +N I HR+Q R
Sbjct: 252 -----QAGNPALQGGHNQQNCAAARL--ICRELGLTDTQINDGISSFSGLAHRLQPAGR- 303
Query: 266 IQGVTWVDDSKATNLEATCTGLMDL-KGHKCVILLGGQAK 304
I+ + +++DSKATN EA L + H C GG AK
Sbjct: 304 IEKIQFINDSKATNGEAAAKALASFTRIHWCA---GGIAK 340
>gi|257454325|ref|ZP_05619588.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Enhydrobacter
aerosaccus SK60]
gi|257448228|gb|EEV23208.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Enhydrobacter
aerosaccus SK60]
Length = 486
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 95/299 (31%), Positives = 149/299 (49%), Gaps = 37/299 (12%)
Query: 41 RSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQ 100
R I I+A+TG+N KSTV T VG+M+ + G + VGGNLG P A + P Q
Sbjct: 130 RDIPIIAITGSNAKSTVTTLVGEMVKNAGFKVGVGGNLGTP----ALDLLLEP-----IQ 180
Query: 101 VAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLF---SHMVNTK 157
+AV+E+SS+Q++ V+ VLN++PDHL+RH M Y K +F +V +
Sbjct: 181 MAVLELSSFQLQTTTN-LAAKVATVLNMSPDHLDRHGNMLGYHQAKHRIFQGVQSIVVNR 239
Query: 158 LGLL--PFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNM 215
LL P + G N + + G+ D++ K A G L ++
Sbjct: 240 EDLLSRPLVADDMPTISFGS--NAPDMNQY-GLIKDSDGKIWL----ARGRERLLNEKDV 292
Query: 216 KVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDS 275
+ G HN N A++AL++ G G+ +E++ +T++ PHR + + Q + DDS
Sbjct: 293 PIKGEHNLMN-ALSALAI-GELAGLPLESMLTTLKNFVGLPHRCEFITTTHQ-LDCFDDS 349
Query: 276 KATNLEATCTGLMDL------KGHKCVILLGGQAKVLNGQESNGFEKLIEPLNHHRCVI 328
K TN+ +T ++ L KG K ++LGGQ K N F +L +PL + V+
Sbjct: 350 KGTNIGSTIAAILGLGKVYAPKGKKLAVILGGQGKGQN------FAELAKPLMDYAQVV 402
>gi|117619646|ref|YP_858325.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Aeromonas
hydrophila subsp. hydrophila ATCC 7966]
gi|117561053|gb|ABK38001.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Aeromonas
hydrophila subsp. hydrophila ATCC 7966]
Length = 427
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 93/311 (29%), Positives = 152/311 (48%), Gaps = 40/311 (12%)
Query: 25 GKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSE 84
G R++ +++ V + ++A+TG+NGKSTV T VG+M+ G++ VGGN+G P
Sbjct: 81 GVRIVGDIELF--VREAQVPVIAITGSNGKSTVTTLVGEMIAEAGLKVGVGGNIGTP--- 135
Query: 85 AAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYAL 144
AL K + V+E+SS+Q+E + SVVLNL+ DH++R++ M +Y
Sbjct: 136 ------ALELLKQPMDLCVLELSSFQLETTHSLRA-AASVVLNLSEDHMDRYQGMADYRA 188
Query: 145 TKCHLFSH----MVNTKLG-LLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASF 199
K + H ++N LP Q F L G + ++D
Sbjct: 189 AKMEIHQHSQHILINRDDAQTLPDVGQVWQS------FGLDCNG-YGRCELDGRHWLTLH 241
Query: 200 EVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRM 259
P + V MK++G HN N A+AA+++ +G+ E + PHR
Sbjct: 242 GEPLLAV------DEMKIVGAHNQAN-ALAAMALCDA-VGIPREPQLRVLRRFEGLPHRA 293
Query: 260 QIVHRDIQGVTWVDDSKATNLEAT---CTGLMDLKGHKCVILLGGQAKVLNGQESNGFEK 316
+ V R++ GV W++DSKATN+ AT G+ + + ++L GGQ K GQ+ +
Sbjct: 294 RFV-REVNGVRWINDSKATNVGATLAAVAGVRESVKGRLLLLAGGQGK---GQDFGPVQA 349
Query: 317 LI-EPLNHHRC 326
L+ ++H C
Sbjct: 350 LLGSQIDHMYC 360
>gi|118581691|ref|YP_902941.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Pelobacter
propionicus DSM 2379]
gi|158512568|sp|A1AU63.1|MURD_PELPD RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|118504401|gb|ABL00884.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Pelobacter
propionicus DSM 2379]
Length = 446
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 148/315 (46%), Gaps = 30/315 (9%)
Query: 23 QSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPL 82
++G ++SE++ A++ I ++A+TGTNGK+T T G + G FVGGN+GNPL
Sbjct: 90 EAGVEIISEIELASRFI--QAPLVAITGTNGKTTATTITGDIFIKNGFRTFVGGNIGNPL 147
Query: 83 SEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNY 142
E L S++P +V V E+SS+Q+E + F P V+ +LNL+ DHL+R+ + + Y
Sbjct: 148 IE------LLESAEPVERV-VAEISSFQLEWI-RAFRPAVAALLNLSEDHLDRYASYREY 199
Query: 143 ALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVP 202
K +F + ++ ++ + E +G R L FP + E F
Sbjct: 200 IEAKLRIFENQTADDYAVVNADDELVMEHSRGLRACL-----FPFSR-KQELDEGIFHRE 253
Query: 203 AV------GVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPP 256
+ G + ++ G HN N A L L+ E+L + +
Sbjct: 254 GLIVWRHNGREERFPTAGFRLQGVHNLENIMAALACSLLLECR-PTESL-ACVREFEALH 311
Query: 257 HRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEK 316
HRM+ V R++ GV W +DSKATN+ + L ++ GG+ K G + +
Sbjct: 312 HRMEFV-RELNGVRWYEDSKATNVGSVEKALESFDA--ITLIAGGKDK---GGSYSPLSR 365
Query: 317 LIEPLNHHRCVITEC 331
L+ H +I E
Sbjct: 366 LVRERVRHLVLIGEA 380
>gi|336313066|ref|ZP_08568009.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Shewanella sp.
HN-41]
gi|335863186|gb|EGM68344.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Shewanella sp.
HN-41]
Length = 439
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 156/317 (49%), Gaps = 39/317 (12%)
Query: 20 CLLQSGKRVMSELD-FAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNL 78
+L G V+ +++ FA ++ R ++ +TG+NGKSTV T VG+ML G+ VGGN+
Sbjct: 85 AVLDMGIEVIGDVELFAREIADRKPCVIGITGSNGKSTVTTLVGEMLREAGMAVAVGGNI 144
Query: 79 GNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKT 138
G P AL ++ V+E+SS+Q+E + C VS LN+T DH++R+
Sbjct: 145 GIP---------ALDLLSKNAEIFVLELSSFQLETTHSLNC-VVSTCLNVTEDHMDRYSD 194
Query: 139 MKNYALTKCHLFSH---MVNTKLGLLPFGNQHLNEAIKGHRFNLAWI-GAFPGVKIDTEA 194
M Y K L+ ++ + L + +N+ + F LA G G+ D++
Sbjct: 195 MDAYRNAKLRLYHQSRAVLFNRDDALTMPTEPMNQ----NSFGLAPPEGDEWGIS-DSKI 249
Query: 195 KTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRT 254
S E+ + + + ++G HN+ N +AA++++ +GVD + +
Sbjct: 250 YHGSSEI--------MPITEVSLIGSHNHAN-LLAAMALVDA-VGVDRQVMAKVARTFTG 299
Query: 255 PPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGH--KCVILLGGQAKVLNGQESN 312
HR ++V GVT+V+DSKATN+ AT L L H +++ GG K +
Sbjct: 300 LSHRCEVVGVK-GGVTYVNDSKATNVGATVAALDGLSDHLGDIILIAGGDGKGAD----- 353
Query: 313 GFEKLIEPLNHHRCVIT 329
F L+EPL +IT
Sbjct: 354 -FGPLVEPLTKVTHLIT 369
>gi|255020011|ref|ZP_05292084.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Acidithiobacillus
caldus ATCC 51756]
gi|254970540|gb|EET28029.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Acidithiobacillus
caldus ATCC 51756]
Length = 454
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/272 (31%), Positives = 135/272 (49%), Gaps = 37/272 (13%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALP-SSKPKFQVAV 103
I A+TG+NGKSTV T +G+M G VGGNLG P + LP + P+ ++ V
Sbjct: 111 IAAITGSNGKSTVTTLLGEMAKAAGRRVAVGGNLGTPALD------LLPEAGAPEPELYV 164
Query: 104 VEVSSYQMEIPNKYFC----PTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLG 159
+E+SS+Q+ ++C P V+ +LNL+PDHL+ H M+ Y K +F M
Sbjct: 165 LELSSFQL-----HYCHALRPRVAAILNLSPDHLDWHGDMEAYLAAKARIFRTMGEGDTL 219
Query: 160 LLPFGNQHLNE-------AIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQL 212
+L + L ++ RF G P ++D A + P+ + + L
Sbjct: 220 VLNGEDPALQSLPAKAPAGVEIRRF-----GHTP--QLDAWADDLALHWPS---AAPMPL 269
Query: 213 HNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWV 272
++ + G+HN N V A +++ + + A+ R PHR+Q V R + GV +
Sbjct: 270 ADIHLPGKHNGEN--VLAAALMANALNLPETAIRQAAADFRGLPHRLQWVAR-VGGVDYY 326
Query: 273 DDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
DDSK TNL A+ + L G V++LGG AK
Sbjct: 327 DDSKGTNLGASLRAIQALPG-PLVLILGGDAK 357
>gi|435854480|ref|YP_007315799.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Halobacteroides
halobius DSM 5150]
gi|433670891|gb|AGB41706.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Halobacteroides
halobius DSM 5150]
Length = 454
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 141/288 (48%), Gaps = 34/288 (11%)
Query: 24 SGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLS 83
+G V+SE++ A + + +ILA+TG+NGK+T G++ + VGGN+G L
Sbjct: 92 AGIEVISEVELAYRYT--TAQILAITGSNGKTTTTMLTGEIFKETDFKTIVGGNIGRALI 149
Query: 84 EAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYA 143
+ + K +A+ E+SS+Q+E K F P +S+VLNLTPDHL+RH T +NYA
Sbjct: 150 KDLPYL-------SKEDLAIAEISSFQLE-GTKEFRPKISLVLNLTPDHLDRHGTFENYA 201
Query: 144 LTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWI--------GAF-PGVKIDTEA 194
K + + +L + +Q + + + + G F KI +
Sbjct: 202 AAKKKIVVNQRKEDYAILNYDDQDVRQFANSTAAEVVFFSQQEELEKGVFVTDNKIVSNL 261
Query: 195 KTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVA-ALSVLGLDIGVDVEALNSTIEILR 253
K + E+ + + + + G HN NA A A+S+L +GV + L +
Sbjct: 262 KGQTEEI--------ISIEQLGLKGPHNLENALGAIAMSLL---MGVSKDKLVKVLSEFT 310
Query: 254 TPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGG 301
+ HR++ V I+GV +V+DSK TN A L ++ +IL+ G
Sbjct: 311 SVEHRIEGVAT-IKGVKYVNDSKGTNPAAAIKALETF--NEPIILIAG 355
>gi|337755807|ref|YP_004648318.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Francisella sp.
TX077308]
gi|336447412|gb|AEI36718.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Francisella sp.
TX077308]
Length = 414
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 150/304 (49%), Gaps = 41/304 (13%)
Query: 26 KRVMSELDFAAQVIPRS-IKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSE 84
++++S++D Q I + K++AVTG+NGKST+VT + +L LG ++ + GN+G P
Sbjct: 79 QKIVSDIDLFYQSIRNTKAKMIAVTGSNGKSTIVTMLDFVLRDLGYKSILVGNIGTP--- 135
Query: 85 AAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYAL 144
L +F VVEVSS+Q+++ N + V+N++PDHL+R+ + Y
Sbjct: 136 ------PLNKIGERFDYCVVEVSSFQIDLFNS-VEFDLGCVINVSPDHLDRYNNYEEYK- 187
Query: 145 TKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAV 204
+KL L F N + H L + G + V+ + K A+
Sbjct: 188 ----------QSKLNLAKFSNDFFVYDV--HNNGLKYAGEYQIVR-GSIYKNAT------ 228
Query: 205 GVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHR 264
L ++ + G HN N V L++ G+D + ++++ + HR ++V +
Sbjct: 229 ---KLLDINETNLFGEHNLENIIV-VLNIFDR-FGIDAFKVVNSVKKFKGLKHRCEVVKK 283
Query: 265 DIQGVTWVDDSKATNLEATCTGLMDLKGHKCVI-LLGGQAKVLNGQESNGFEKLIEPLNH 323
G+T+++DSK TN+ AT L + K +I LLGG AK G + N +K ++
Sbjct: 284 -TNGITYINDSKGTNVGATIAALNSITNSKNIILLLGGVAK---GGDFNLMKKSLDKYVK 339
Query: 324 HRCV 327
+ CV
Sbjct: 340 YICV 343
>gi|189485185|ref|YP_001956126.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [uncultured Termite
group 1 bacterium phylotype Rs-D17]
gi|170287144|dbj|BAG13665.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [uncultured Termite
group 1 bacterium phylotype Rs-D17]
Length = 441
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 146/284 (51%), Gaps = 27/284 (9%)
Query: 27 RVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAA 86
++MSEL F+ + + KI+AV+GTNGK+TV + +++ ++ V GN+G PL++ A
Sbjct: 84 KIMSELAFSLEN-SKYKKIMAVSGTNGKTTVTDLISKIIKAAHKDSIVSGNIGCPLADKA 142
Query: 87 FHCIALPSSKPKFQVAVVEVSSYQM-EIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALT 145
L +++ F +E+SSYQ+ + P+ F P +SV+LN+TPDHLE HKTMK Y
Sbjct: 143 -----LKTTETTF--ITMELSSYQLGDTPD--FRPAISVLLNITPDHLEYHKTMKAYLRA 193
Query: 146 KCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVG 205
K ++F + + ++ + ++ + + + + + P K F
Sbjct: 194 KENIFINQRDGDFTVINYDDKICRKIFEKTKAAVIFFSKTP-------LKKGVFYDSGSI 246
Query: 206 VVSQLQLH-----NMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQ 260
V++ + H + ++G HN N + A GV + + + HR++
Sbjct: 247 VINVKEKHYVIKPKINIVGTHNIEN--ILAAVAASYAAGVKPAVIEKIVSKYKGVEHRIE 304
Query: 261 IVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
V + + GV + +DSK+TN+++T L + +I++GG+ K
Sbjct: 305 FV-KTLNGVDYYNDSKSTNIDSTRVALESFDKN-ILIIMGGRDK 346
>gi|422002286|ref|ZP_16349524.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Leptospira
santarosai serovar Shermani str. LT 821]
gi|417259218|gb|EKT88597.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Leptospira
santarosai serovar Shermani str. LT 821]
Length = 462
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 136/279 (48%), Gaps = 22/279 (7%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V SE+D KI+ VTGT+GKST + +L + GGNLG P +
Sbjct: 89 VFSEIDLGRFFFKG--KIIGVTGTDGKSTTTSLTAHLLRKDFSDLREGGNLGTPFTSFCK 146
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
I+L AV+E+SSYQ++ N VSV LNL PDHLERH TM+NY K
Sbjct: 147 KPISL---------AVLELSSYQLDDSNPLHL-DVSVFLNLAPDHLERHTTMENYFQAKL 196
Query: 148 HLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVV 207
+ +++ N L+ ++E IK NLA T A A + + +
Sbjct: 197 KI-ANLQNENHFLI------VSEKIKERILNLASFRCKLLSFGRTSASDAFLDENSSKIG 249
Query: 208 SQLQLHNMKVMGRHNYHNAAVAALSVLGLD-IGVDVEALNSTIEILRTPPHRMQIVHRDI 266
+ ++++ HN A S+L + IG E++ + I + + PHR QI +
Sbjct: 250 TSKFVYDISGFHLPGTHNGENLAASILAAEAIGGKPESIQAQIPLFKGLPHRFQIAG-EK 308
Query: 267 QGVTWVDDSKATNLEATCTGLMDLKG-HKCVILLGGQAK 304
QG+++++DSK+TNL + G+ K + ++LGG+ K
Sbjct: 309 QGISFINDSKSTNLHSMLAGMSTWKNLDRTCLILGGRPK 347
>gi|294101816|ref|YP_003553674.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Aminobacterium
colombiense DSM 12261]
gi|293616796|gb|ADE56950.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Aminobacterium
colombiense DSM 12261]
Length = 457
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 93/286 (32%), Positives = 138/286 (48%), Gaps = 25/286 (8%)
Query: 25 GKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSE 84
G V+ E+DF A I K++ VTG+NGKST +G +L G + V GN+GNPLS
Sbjct: 95 GIPVIGEIDFVAPHIKG--KVIGVTGSNGKSTTTMLIGHLLKKYGYKTAVAGNIGNPLS- 151
Query: 85 AAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYAL 144
H + V+E+SS+Q+ + V++V NL PDH++ H + NY
Sbjct: 152 --LH------ASQNLDFIVIELSSFQLYWAH-LLKSHVAIVTNLAPDHIDWHGSFTNYLK 202
Query: 145 TKCHLFSHMVNTKLGLLPFGN-QHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPA 203
K L ++ + L + K +L W G P K T+A E A
Sbjct: 203 AKARLVRLQEPGHWAVVQNRDVDALQLSGKSAVASLYWEGQEPVHK--TDAYICMGEQEA 260
Query: 204 VGVVSQLQL----HNMKVMGRHNYHNAAVAALS-VLGLDIGVDVEALNSTIEILRTPPHR 258
++ +L ++ ++GRHN N A+ A + +LG GV L + PHR
Sbjct: 261 WLSYNKKELLFDYRDVDLIGRHNLENLAMTASALILG---GVPCSNLTKQLSDFIPLPHR 317
Query: 259 MQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
V +I GV ++DDSK TN+ A+ T L + G K V++LGGQ K
Sbjct: 318 CTFV-AEINGVRYIDDSKGTNVAASATALTSIHGPK-VVILGGQGK 361
>gi|374602399|ref|ZP_09675392.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Paenibacillus
dendritiformis C454]
gi|374392001|gb|EHQ63330.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Paenibacillus
dendritiformis C454]
Length = 475
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 145/297 (48%), Gaps = 34/297 (11%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L G V++E++ A + P I+ +TG+NGK+T T+VG ML G+ V GN+G P
Sbjct: 93 LALGIEVVTEVEVAYHLSP--APIIGITGSNGKTTTTTWVGNMLEAAGLRPIVAGNIGTP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
L +AA A V V E+SS+Q++ ++ F P V+ +LNL+ HL+ H TM++
Sbjct: 151 LCQAAGEAAA-------DNVLVAELSSFQLKGTSE-FRPRVASLLNLSETHLDYHGTMED 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFP----GVKIDTEAKTA 197
Y +K LF +M N + +L + + W+ + GV ++ A
Sbjct: 203 YVQSKARLFRNMANGDIAVLNADDAACRALAPDIGARIWWVSSTRRVECGVYVEPPYPEA 262
Query: 198 SFEVPA-----VGVVSQLQLH------NMKVMGRHNYHNA-AVAALSVLGLDIGVDVEAL 245
S E V QLH + V GR+N NA A A+S+ G AL
Sbjct: 263 SREGEDEDRQLVYADEAGQLHPIIGVREIGVSGRYNVDNALAAVAISIAA---GAKPGAL 319
Query: 246 NSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKC-VILLGG 301
+ R HR++ V ++ G ++ ++SKATN +AT LM L+ + V+L+ G
Sbjct: 320 AEPLRSFRGVEHRLEYVG-EVNGTSYYNNSKATNTKAT---LMALEAFEAPVVLIAG 372
>gi|303230748|ref|ZP_07317495.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Veillonella
atypica ACS-049-V-Sch6]
gi|302514508|gb|EFL56503.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Veillonella
atypica ACS-049-V-Sch6]
Length = 454
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 97/282 (34%), Positives = 140/282 (49%), Gaps = 21/282 (7%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V+SE++ A V I L VTGTNGK+T T + Q++ G+ VGGN+G+ LSEAA+
Sbjct: 95 VVSEVELAYDVCKSPI--LGVTGTNGKTTTTTLLTQVMESTGLPVKVGGNIGDSLSEAAY 152
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
H P+ V E+SSYQ+E K FCP ++VLN+TPDHL RHKTM+NYA K
Sbjct: 153 HM-------PEGGYLVAELSSYQLETI-KSFCPLGAIVLNVTPDHLARHKTMENYAAAKA 204
Query: 148 HLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAF----PGVKIDTEAKTASFEVPA 203
+F + +L + + K + I G + A + A
Sbjct: 205 RIFMNQNPENFVVLNDDDPIVRAMKKDAHSKVLSISQHHKVDSGAYFEGNTCYAVLDGKA 264
Query: 204 VGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVH 263
V+ +H + G HN N + A+ L +GV+VE + TIE HR++ V
Sbjct: 265 TPVIDTEHIH---IKGSHNIEN--ILAVIALTYALGVEVEHIKHTIEQFHGVEHRLERV- 318
Query: 264 RDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKV 305
VT+ +DSKATN ++ L D ++L GG K+
Sbjct: 319 TTFHDVTFYNDSKATNTDSVVKAL-DAFDKPVILLAGGHDKM 359
>gi|291542832|emb|CBL15942.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Ruminococcus
bromii L2-63]
Length = 463
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 135/290 (46%), Gaps = 20/290 (6%)
Query: 18 LACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGN 77
L L G + SE++ + P +I+AVTG++GK+T T + + L G +GGN
Sbjct: 93 LVALRNKGVVLTSEMEVFFDLCP--CRIIAVTGSDGKTTTTTIISEFLKAAGFNVHLGGN 150
Query: 78 LGNPLSEAAFHCIALP--SSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLER 135
+G PL LP S AVVE+SS+Q+ K P ++VV NL P+HL+
Sbjct: 151 IGKPL---------LPEIESVNDDDCAVVELSSFQLISMRK--SPDIAVVTNLAPNHLDI 199
Query: 136 HKTMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAK 195
HK M+ Y +K ++ H +L N+ N + R LA V
Sbjct: 200 HKDMQEYIDSKKNIILHQNAFSKAVLNLDNEITNGFSESVRGQLAKFSVKENVSNGAFLD 259
Query: 196 TASFEVPAVGVVSQ-LQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRT 254
+ G +++ + +H++K+ G HN N A +V GL VD E + + +
Sbjct: 260 GDTICYNDYGKITRIMNIHDIKIPGMHNVENYLAAISAVWGL---VDAETMTAVAKTFGG 316
Query: 255 PPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
HR + V R++ GV + +DS A++ T G + L K I+ GG K
Sbjct: 317 VAHRAEFV-REVDGVKYYNDSIASSPTRTALGTLSLYKQKICIIAGGYDK 365
>gi|411011895|ref|ZP_11388224.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Aeromonas
aquariorum AAK1]
gi|423198459|ref|ZP_17185042.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Aeromonas
hydrophila SSU]
gi|404630178|gb|EKB26879.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Aeromonas
hydrophila SSU]
Length = 427
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 90/294 (30%), Positives = 145/294 (49%), Gaps = 38/294 (12%)
Query: 42 SIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQV 101
+ ++A+TG+NGKSTV T VG+M+ G++ VGGN+G P AL K +
Sbjct: 96 EVPVIAITGSNGKSTVTTLVGEMIAEAGLKVGVGGNIGTP---------ALELLKQPMDL 146
Query: 102 AVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSH----MVNTK 157
V+E+SS+Q+E + SVVLNL+ DH++R++ M +Y K + H +VN
Sbjct: 147 CVLELSSFQLETTHSLRA-AASVVLNLSEDHMDRYQGMADYRAAKMEIHQHSQHILVNRD 205
Query: 158 LG-LLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMK 216
LP Q F L G + +++ P + V MK
Sbjct: 206 DAQTLPDVGQVWQS------FGLDCNG-YGRCELEGRQWLTLHGEPLLAV------DEMK 252
Query: 217 VMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSK 276
++G HN N A+AA+++ +G+ E + + PHR + V R++ GV W++DSK
Sbjct: 253 IVGAHNQAN-ALAAMALCDA-VGIPREPQLAVLRRFEGLPHRARFV-REVNGVRWINDSK 309
Query: 277 ATNLEAT---CTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI-EPLNHHRC 326
ATN+ AT G+ + + ++L GGQ K GQ+ + L+ ++H C
Sbjct: 310 ATNVGATLAAVAGVRESVKGRLLLLAGGQGK---GQDFGPVQALLGSQIDHMYC 360
>gi|365121357|ref|ZP_09338348.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Tannerella sp.
6_1_58FAA_CT1]
gi|363645980|gb|EHL85233.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Tannerella sp.
6_1_58FAA_CT1]
Length = 445
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 159/313 (50%), Gaps = 30/313 (9%)
Query: 23 QSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPL 82
+ G ++SE++FA + K++ +TG+NGK+T +L + G+ + GN+G L
Sbjct: 85 KEGIPIISEIEFAGRYT--HAKMICITGSNGKTTTTLLTYHILKNAGLNVGLAGNVGKSL 142
Query: 83 SEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDHLERH-KTMK 140
AL + F V+E+SS+Q++ N Y F ++V+LN+TPDHL+R+ M+
Sbjct: 143 --------ALQVATENFDYYVIELSSFQLD--NMYKFKADIAVLLNITPDHLDRYGYDMQ 192
Query: 141 NYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFP-----GVKIDTEAK 195
NY K + + + + + + +K H A + F GVK TE
Sbjct: 193 NYINAKFRITQNQTPNDAFIYWNDDPIITKELKAHDLK-ARLYPFSEEKEEGVKAYTENN 251
Query: 196 TASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTP 255
+ P + + ++ + GRHN +N+ A++S LDI E + ++ +
Sbjct: 252 QIVIDAPNDTLT--ITEDDLALQGRHNLYNSMAASISAKVLDIK--KEDIREGLKDFKGV 307
Query: 256 PHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFE 315
HR++ V R ++GV +++DSKATN+ + L ++ K +++LGG+ K G + + E
Sbjct: 308 EHRLEKVAR-VRGVEFINDSKATNVNSCWYALESMRT-KVILILGGKDK---GNDYSEIE 362
Query: 316 KLI-EPLNHHRCV 327
+L+ E +N C+
Sbjct: 363 ELVKEKVNAIICL 375
>gi|206602134|gb|EDZ38616.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Leptospirillum sp.
Group II '5-way CG']
Length = 487
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 94/302 (31%), Positives = 139/302 (46%), Gaps = 35/302 (11%)
Query: 26 KRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEA 85
+ VM E+++A+ + S+ ++AV GTNGKST + L G F+GGN G PLSE
Sbjct: 100 RNVMGEMEWAS--LRTSVPLVAVGGTNGKSTTSALLAHFLEAAGERVFLGGNFGTPLSEM 157
Query: 86 AFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALT 145
S P VAVVE+SS+Q E F P V+++LN+TPDHL+R+ ++ +Y
Sbjct: 158 VLS--EREGSSPLPTVAVVELSSFQAET-MGVFRPVVNLLLNITPDHLDRYLSVDHYRRA 214
Query: 146 KCHLFSHMVNTKLGLLPFGNQH----LNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEV 201
K + F M +L N+ + LAW F G K +T +
Sbjct: 215 KWNAFQTMEKDSFTVL---NRDPACGVYPPFSPISSRLAW---FYGSKEPCPDRTGGLIL 268
Query: 202 PAVGVVSQLQ-----------LHNMKVMGRHNYHN------AAVAALSVLGLDIGVDVEA 244
+ + L L N + G N N AV L G A
Sbjct: 269 EGDPLSATLDGIEGLPPISWNLKNFPLEGMGNRQNLAAALLGAVLYLQATGKHPEQATTA 328
Query: 245 LNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVI--LLGGQ 302
L R PHRM++V + +G+ +++DSKATN++AT L GH ++ +LGG+
Sbjct: 329 LEKAAASFRGLPHRMEVVG-EWKGIRFINDSKATNVDATRLALEGYAGHSPIVHLILGGR 387
Query: 303 AK 304
K
Sbjct: 388 DK 389
>gi|332295506|ref|YP_004437429.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Thermodesulfobium
narugense DSM 14796]
gi|332178609|gb|AEE14298.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Thermodesulfobium
narugense DSM 14796]
Length = 464
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 138/290 (47%), Gaps = 35/290 (12%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V+ ELD ++P + + VTGTNGK+TV ++G + +V GN+G PLSE +
Sbjct: 100 VVGELDLVFGLLPDGVNTIGVTGTNGKTTVTEWIGYGFEVAKMPYYVAGNVGTPLSEIIY 159
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFC-PTVSVVLNLTPDHLERHKTMKNYALTK 146
+ + V+E+SSYQ+E N F P ++++ NLT DH++R+ + Y K
Sbjct: 160 DIVTGSN-------LVLELSSYQIE--NSIFLKPKIAMITNLTLDHIDRYANLDEYFNAK 210
Query: 147 CHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAV-- 204
HLF + N + + +L + IK NL KI +K F + V
Sbjct: 211 VHLFKNQENG-YSIYNKDDPYLEKNIK----NLTL-----KTKILNVSKRKDFSIAGVIE 260
Query: 205 ---------GVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTP 255
V + L ++ + G HN NA A S L L V+ + + +
Sbjct: 261 NKIFVKDNLDFVKIIDLSDLSLKGEHNIENALFVA-SSLYLS-SVEPKHIEKALSTFSGV 318
Query: 256 PHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDL-KGHKCVILLGGQAK 304
HR + + +G+TW++DSK+TN E+T L + + +++LGG+ K
Sbjct: 319 EHRQERFYTH-KGITWINDSKSTNPESTIVALKTWGENNNLILILGGKDK 367
>gi|94266852|ref|ZP_01290512.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [delta
proteobacterium MLMS-1]
gi|93452482|gb|EAT03081.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [delta
proteobacterium MLMS-1]
Length = 524
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 96/342 (28%), Positives = 154/342 (45%), Gaps = 64/342 (18%)
Query: 23 QSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPL 82
++G ++ EL A + ++AVTGTNGKSTV T +G++L G + FVGGNLG PL
Sbjct: 101 RAGVPIIGELALAPAYL--HTPVIAVTGTNGKSTVTTLIGELLQAAGYKTFVGGNLGVPL 158
Query: 83 SEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNY 142
++ +A P + V+EVSS+Q++ F P + V+LN++PDHL+R+ + Y
Sbjct: 159 AQ----YLAGPQ---EADWVVLEVSSFQLDTAGA-FRPQIGVLLNISPDHLDRYPDYQAY 210
Query: 143 ALTKCHLFSHMVNTKLGLLPFGNQHLNE-AIK----GHRFNL------------------ 179
A +K LF+H T +L + + A+ R +
Sbjct: 211 AASKWRLFAHQRATDWAVLNGADPEIARLAVAAPPVARRLDFNCQPRPEGQATAIDDKIT 270
Query: 180 ----AWIGAFP-GVK------------IDTEAKTASFEVPAVG---VVSQLQLHNMKVMG 219
AW + P G + + + + PA G + ++ ++
Sbjct: 271 ITGGAWSASTPAGARLLVNVYSLLKQPVTGPGERLQWSTPAAGADPIPPEVYEPGPELAV 330
Query: 220 RHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATN 279
N NA A L+ G A+ + ++ PHR+ +V I GV + DDSKATN
Sbjct: 331 EPNLQNAQAAILAA--RLAGCSSSAVVGGLRAFKSLPHRLALVA-SIAGVDYYDDSKATN 387
Query: 280 LEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPL 321
+ A + L L + VIL+ G G + G KL+ P+
Sbjct: 388 IGAVVSALQGLA--QPVILIAG------GLDKGGDYKLLLPV 421
>gi|225872736|ref|YP_002754193.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Acidobacterium
capsulatum ATCC 51196]
gi|254766033|sp|C1F460.1|MURD_ACIC5 RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|225794452|gb|ACO34542.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Acidobacterium
capsulatum ATCC 51196]
Length = 461
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 147/314 (46%), Gaps = 42/314 (13%)
Query: 25 GKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSE 84
G ++ E++ AA+ + K LA+TG+NGK+T + G +L VGGN+G P+
Sbjct: 92 GLPIIGEVELAARFLKG--KTLAITGSNGKTTTTSLCGAILERAHQHVQVGGNIGLPV-- 147
Query: 85 AAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYAL 144
IAL +V+E+SS+Q+E + F P ++V+LN+TPDHL+RH + +NY
Sbjct: 148 -----IALVDDSRDDGWSVLEISSFQLETTER-FRPGIAVILNITPDHLDRHGSFENYVA 201
Query: 145 TKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWI--------GAF--PGVKIDTEA 194
K +F+ + +L + + A + W GAF G + A
Sbjct: 202 AKERIFAAQTHDDALILNADDDAASRAAARASSRIFWFSRNRVIRQGAFVHEGNILFRAA 261
Query: 195 KTASFEVPAVGVVSQLQLHNMKVMGRHNYHN--AAVAALSVLGLDIGVDVEALNSTIEIL 252
+ A+ E L L + + G HN N AAV A + GV EA+ +
Sbjct: 262 EDAATE-------PILPLSEIPLKGAHNVENVLAAVCAARL----AGVSAEAIRDAVRDF 310
Query: 253 RTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESN 312
R HR++ V +I GV++ +DSKATN++A + GG +L G++ N
Sbjct: 311 RAVEHRLEFVA-EIGGVSFYNDSKATNVDAARKAIEAFP--------GGIHLILGGKDKN 361
Query: 313 GFEKLIEPLNHHRC 326
+ + PL R
Sbjct: 362 SDYRTLRPLMAGRV 375
>gi|94269090|ref|ZP_01291365.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [delta
proteobacterium MLMS-1]
gi|93451350|gb|EAT02218.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [delta
proteobacterium MLMS-1]
Length = 524
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 96/342 (28%), Positives = 154/342 (45%), Gaps = 64/342 (18%)
Query: 23 QSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPL 82
++G ++ EL A + ++AVTGTNGKSTV T +G++L G + FVGGNLG PL
Sbjct: 101 RAGVPIIGELALAPAYL--HTPVIAVTGTNGKSTVTTLIGELLQAAGYKTFVGGNLGVPL 158
Query: 83 SEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNY 142
++ +A P + V+EVSS+Q++ F P + V+LN++PDHL+R+ + Y
Sbjct: 159 AQ----YLAGPQ---EADWVVLEVSSFQLDTAGA-FRPQIGVLLNISPDHLDRYPDYQAY 210
Query: 143 ALTKCHLFSHMVNTKLGLLPFGNQHLNE-AIK----GHRFNL------------------ 179
A +K LF+H T +L + + A+ R +
Sbjct: 211 AASKWRLFAHQRATDWAVLNGADPEIARLAVAAPPVARRLDFNCQPQPEGRATAIDDEIT 270
Query: 180 ----AWIGAFP-GVK------------IDTEAKTASFEVPAVG---VVSQLQLHNMKVMG 219
AW + P G + + + PA G + ++ ++
Sbjct: 271 MTGGAWSASTPAGARLLVNVYSLLKQPVTGPGERLPLPTPAAGADPIPPEVYEPGPELAV 330
Query: 220 RHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATN 279
N NA A L+ G A+ + + ++ PHR+ +V I GV + DDSKATN
Sbjct: 331 EPNLQNAQAAILAA--RLAGCSSSAVVAGLRAFKSLPHRLALVA-SIAGVDYYDDSKATN 387
Query: 280 LEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPL 321
+ A + L L + VIL+ G G + G KL+ P+
Sbjct: 388 IGAVVSALQGLA--QPVILIAG------GLDKGGDYKLLLPV 421
>gi|410637810|ref|ZP_11348380.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Glaciecola
lipolytica E3]
gi|410142496|dbj|GAC15585.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Glaciecola
lipolytica E3]
Length = 434
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 140/292 (47%), Gaps = 38/292 (13%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
+++G V+ +++ A+ I ++A+TG+NGKSTV V +MLN G +A +GGN+G P
Sbjct: 83 IEAGVEVIGDVELFARF--NQIPVIAITGSNGKSTVTCLVNEMLNCAGFKAQMGGNIGTP 140
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
+ L K + V+E+SS+Q+E + P + +LN++ DHL+RH+T
Sbjct: 141 V---------LDLLKSDAEYLVLELSSFQLERL-QSLTPVCATILNVSEDHLDRHRTFSA 190
Query: 142 YALTKCHLF---SHMVNTKLGLLPFGNQHLNE---AIKGHRFNLAWIGAFPGVKIDTEAK 195
YA K ++ + + + + + +++ + + ++W A + +D EA
Sbjct: 191 YADAKKRIYHNAKYAIANRDDVKTWPHEYQPQYSFGLSNSPLGISWNDASREILVDGEAY 250
Query: 196 TASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTP 255
+ H + G HN N A V L GV EA+ + +
Sbjct: 251 VSE--------------HQCALKGLHNVLNIQAAIGCVRPL--GVGAEAITQAVGQFKGL 294
Query: 256 PHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGH---KCVILLGGQAK 304
HR +++ Q V W++DSKATN+ AT L LK K V++ GG K
Sbjct: 295 AHRFELISEHNQ-VRWINDSKATNVGATIAALQSLKNRDSGKLVLIAGGDGK 345
>gi|94264633|ref|ZP_01288416.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [delta
proteobacterium MLMS-1]
gi|93454928|gb|EAT05169.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [delta
proteobacterium MLMS-1]
Length = 524
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 96/342 (28%), Positives = 154/342 (45%), Gaps = 64/342 (18%)
Query: 23 QSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPL 82
++G ++ EL A + ++AVTGTNGKSTV T +G++L G + FVGGNLG PL
Sbjct: 101 RAGVPIIGELALAPAYL--HTPVIAVTGTNGKSTVTTLIGELLQAAGYKTFVGGNLGVPL 158
Query: 83 SEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNY 142
++ +A P + V+EVSS+Q++ F P + V+LN++PDHL+R+ + Y
Sbjct: 159 AQ----YLAGPQ---EADWVVLEVSSFQLDTAGA-FRPQIGVLLNISPDHLDRYPDYQAY 210
Query: 143 ALTKCHLFSHMVNTKLGLLPFGNQHLNE-AIK----GHRFNL------------------ 179
A +K LF+H T +L + + A+ R +
Sbjct: 211 AASKWRLFAHQRATDWAVLNGADPEIARLAVAAPPVARRLDFNCQPQPEGQATAIDDKIT 270
Query: 180 ----AWIGAFP-GVK------------IDTEAKTASFEVPAVG---VVSQLQLHNMKVMG 219
AW + P G + + + + PA G + ++ ++
Sbjct: 271 ITGGAWSASTPAGARLLVNVYSLLKQPVTGPGERLQWSTPAAGADPIPPEVYEPGPELAV 330
Query: 220 RHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATN 279
N NA A L+ G A+ + ++ PHR+ +V I GV + DDSKATN
Sbjct: 331 EPNLQNAQAAILAA--RLAGCSSSAVVGGLRAFKSLPHRLALVA-SIAGVDYYDDSKATN 387
Query: 280 LEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPL 321
+ A + L L + VIL+ G G + G KL+ P+
Sbjct: 388 IGAVVSALQGLA--QPVILIAG------GLDKGGDYKLLLPV 421
>gi|386312141|ref|YP_006008306.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Shewanella
putrefaciens 200]
gi|319424766|gb|ADV52840.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Shewanella
putrefaciens 200]
Length = 439
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 151/314 (48%), Gaps = 37/314 (11%)
Query: 22 LQSGKRVMSELD-FAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
L G V+ +++ FA ++ R ++ +TG+NGKSTV T VG+ML G+ VGGN+G
Sbjct: 87 LDMGIEVIGDVELFAREIADRKPCVIGITGSNGKSTVTTLVGEMLREAGMAVAVGGNIGV 146
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMK 140
P AL ++ V+E+SS+Q+E + C S LN+T DH++R+ M
Sbjct: 147 P---------ALDLLSENAEIFVLELSSFQLETTHSLNC-VASTCLNVTEDHMDRYSDMD 196
Query: 141 NYALTKCHLF---SHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTA 197
Y K L+ ++ + L + +N+ + F LA D++
Sbjct: 197 AYRKAKLRLYHQSRSIIFNRDDALTIPTEPMNQ----NSFGLAPPEGDEWGICDSKIYHG 252
Query: 198 SFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPH 257
E+ + VS ++G HN+ N +AA++++ +GVD + + H
Sbjct: 253 RSEIMPITEVS--------LIGSHNHAN-LLAAMALV-YAVGVDKQVMAKVARTFTGLSH 302
Query: 258 RMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGH--KCVILLGGQAKVLNGQESNGFE 315
R ++V GVT+V+DSKATN+ AT L L H +++ GG K + F
Sbjct: 303 RCEVVGIK-GGVTYVNDSKATNVGATVAALDGLSDHLGDIILIAGGDGKGAD------FS 355
Query: 316 KLIEPLNHHRCVIT 329
L+EPL+ +IT
Sbjct: 356 PLVEPLSKVTHLIT 369
>gi|313673685|ref|YP_004051796.1| UDP-N-acetylmuramoylalanine/d-glutamate ligase [Calditerrivibrio
nitroreducens DSM 19672]
gi|312940441|gb|ADR19633.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Calditerrivibrio
nitroreducens DSM 19672]
Length = 416
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 98/315 (31%), Positives = 153/315 (48%), Gaps = 49/315 (15%)
Query: 26 KRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEA 85
+R+ SEL+ A + I + KI+ +TGTNGKSTV Q+L ++GI A GN+G + +
Sbjct: 67 ERITSELELAFEFI-KDKKIIGITGTNGKSTVTFLTAQLLKNIGINAEFCGNIGVTVGDT 125
Query: 86 AFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALT 145
+ + P V VVEVSS+Q+++ ++ T S + N+TPDHL+R+KTM Y +
Sbjct: 126 --YLLKNP------DVYVVEVSSFQLDLLKRFRFDT-STITNITPDHLDRYKTMDRYITS 176
Query: 146 KCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTA-------- 197
K S MV G+ NE K + N+ + +D E K+
Sbjct: 177 K----SRMVEFTEGVSFLEKGGWNEIFKKYE-NIKY--------VDGELKSYPLLNGNLL 223
Query: 198 SFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGL-DIGVDVEALNSTIEILRTPP 256
FE V V + + G HN N + A L + + DV L +E L
Sbjct: 224 EFEDFYVDV------NRYNLFGFHNIVNLSFALLLTNQIVRLKGDVTGL---VENLTPLE 274
Query: 257 HRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEK 316
HR ++V +I GV +++DSK TN+++T T L + ++LGG+ K NG F
Sbjct: 275 HRCELVT-EINGVKYINDSKGTNVDSTLTALKS-SSYPTTLILGGKDK--NGD----FSV 326
Query: 317 LIEPLNHHRCVITEC 331
L + +N ++ C
Sbjct: 327 LSDEINKKAKLVICC 341
>gi|359683875|ref|ZP_09253876.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Leptospira
santarosai str. 2000030832]
gi|418755293|ref|ZP_13311500.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Leptospira
santarosai str. MOR084]
gi|409964304|gb|EKO32194.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Leptospira
santarosai str. MOR084]
Length = 462
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 135/279 (48%), Gaps = 22/279 (7%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V SE+D KI+ VTGT+GKST + +L + GGNLG P +
Sbjct: 89 VFSEIDLGRFFFKG--KIIGVTGTDGKSTTTSLTAHLLRKDFSDLREGGNLGTPFTSFCK 146
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
I+L AV+E+SSYQ++ N VSV LNL PDHLERH TM+NY K
Sbjct: 147 KPISL---------AVLELSSYQLDDSNPLHL-DVSVFLNLAPDHLERHTTMENYFQAKL 196
Query: 148 HLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVV 207
+ + + N L+ ++E IK NLA T A A + + +
Sbjct: 197 KI-ADLQNENHFLI------VSEKIKERILNLASFRCKLLSFGRTSASDAFLDENSSKIG 249
Query: 208 SQLQLHNMKVMGRHNYHNAAVAALSVLGLD-IGVDVEALNSTIEILRTPPHRMQIVHRDI 266
+ ++++ HN A S+L + IG E++ + I + + PHR QI +
Sbjct: 250 TSKFVYDISGFHLPGTHNGENLAASILAAEAIGGKPESIQAQIPLFKGLPHRFQIAG-EK 308
Query: 267 QGVTWVDDSKATNLEATCTGLMDLKG-HKCVILLGGQAK 304
QG+++++DSK+TNL + G+ K + ++LGG+ K
Sbjct: 309 QGISFINDSKSTNLHSMLAGMSTWKNLDRTCLILGGRPK 347
>gi|418744835|ref|ZP_13301180.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Leptospira
santarosai str. CBC379]
gi|410794166|gb|EKR92076.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Leptospira
santarosai str. CBC379]
Length = 462
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 134/279 (48%), Gaps = 22/279 (7%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V SE+D KI+ VTGT+GKST + +L + GGNLG P +
Sbjct: 89 VFSEIDLGRFFFKG--KIIGVTGTDGKSTTTSLTAHLLRKDFSDLREGGNLGTPFTSFCK 146
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
I+L AV+E+SSYQ++ N VSV LNL PDHLERH TM+NY K
Sbjct: 147 KPISL---------AVLELSSYQLDDSNPLHL-DVSVFLNLAPDHLERHTTMENYFQAKL 196
Query: 148 HLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVV 207
+ + + N L+ ++E IK NLA T A A + + +
Sbjct: 197 KI-ADLQNENHFLI------VSEKIKERILNLASFRCKLLSFGRTSASDAFLDENSSKIG 249
Query: 208 SQLQLHNMKVMGRHNYHNAAVAALSVLGLD-IGVDVEALNSTIEILRTPPHRMQIVHRDI 266
+ ++++ HN A S+L + IG E++ + I + + PHR QI
Sbjct: 250 TSKFVYDISGFHLPGTHNGENLAASILAAEAIGGKPESIQAQIPLFKGLPHRFQIAGEK- 308
Query: 267 QGVTWVDDSKATNLEATCTGLMDLKG-HKCVILLGGQAK 304
QG+++++DSK+TNL + G+ K + ++LGG+ K
Sbjct: 309 QGISFINDSKSTNLHSMLAGMSTWKNLDRTCLILGGRPK 347
>gi|120597219|ref|YP_961793.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Shewanella
sp. W3-18-1]
gi|120557312|gb|ABM23239.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Shewanella sp.
W3-18-1]
Length = 439
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 151/314 (48%), Gaps = 37/314 (11%)
Query: 22 LQSGKRVMSELD-FAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
L G V+ +++ FA ++ R ++ +TG+NGKSTV T VG+ML G+ VGGN+G
Sbjct: 87 LDMGIEVIGDVELFAREIADRKPCVIGITGSNGKSTVTTLVGEMLREAGMAVAVGGNIGV 146
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMK 140
P AL ++ V+E+SS+Q+E + C S LN+T DH++R+ M
Sbjct: 147 P---------ALDLLSENAEIFVLELSSFQLETTHSLNC-VASTCLNVTEDHMDRYSDMD 196
Query: 141 NYALTKCHLF---SHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTA 197
Y K L+ ++ + L + +N+ + F LA D++
Sbjct: 197 AYRKAKLRLYHQSRSIIFNRDDALTIPTEPMNQ----NSFGLAPPEGDEWGICDSKIYHG 252
Query: 198 SFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPH 257
E+ + + + ++G HN+ N +AA++++ +GVD + + H
Sbjct: 253 RSEI--------MPITEVSLIGSHNHAN-LLAAMALV-YAVGVDKQVMAKVARTFTGLSH 302
Query: 258 RMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGH--KCVILLGGQAKVLNGQESNGFE 315
R ++V GVT+V+DSKATN+ AT L L H +++ GG K + F
Sbjct: 303 RCEVVGIK-GGVTYVNDSKATNVGATVAALDGLSDHLGDIILIAGGDGKGAD------FS 355
Query: 316 KLIEPLNHHRCVIT 329
L+EPL+ +IT
Sbjct: 356 PLVEPLSKVTHLIT 369
>gi|88807416|ref|ZP_01122928.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Synechococcus
sp. WH 7805]
gi|88788630|gb|EAR19785.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Synechococcus
sp. WH 7805]
Length = 462
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 140/294 (47%), Gaps = 22/294 (7%)
Query: 18 LACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGN 77
L L G RV E+ A + R I + +TGTNGK+TV + +L H G+EA + GN
Sbjct: 86 LHALRAHGFRVRGEMSVAWDAL-RGIPWIGITGTNGKTTVTHLLQHVLAHAGLEAPMAGN 144
Query: 78 LGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK 137
+G +E A L ++PK V+E+SSYQ+E + P + + LTPDHLERH
Sbjct: 145 VGYSAAELALEV--LQGTRPKPDWVVMEMSSYQIEAAAE-VSPRIGIWTTLTPDHLERHG 201
Query: 138 TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGH--RFNLAWIGAFPGVKIDTEAK 195
T++ Y K L +++ +L + + + GH R + W+ E
Sbjct: 202 TIEAYRAIKRGLLE---RSEIPVLNADDADIRQHC-GHWSRSCIRWVSCG---DHSPEGG 254
Query: 196 TASFEVPAVGVVSQLQLH-----NMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIE 250
V A G VS+ + H ++ + G HN N + ++ L GV + + +
Sbjct: 255 NPQLTVNAQGWVSRGEQHLFPADSLPLPGEHNRQN--MLLVTAAALAAGVSASTIEAALR 312
Query: 251 ILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
PHR++ + + G+ +DSKATN +A GL ++ V+L GGQ K
Sbjct: 313 CFTGVPHRLEPLG-SVGGIPVFNDSKATNYDAAAVGLRSVQA-PVVLLAGGQTK 364
>gi|384086037|ref|ZP_09997212.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Acidithiobacillus
thiooxidans ATCC 19377]
Length = 449
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 89/282 (31%), Positives = 134/282 (47%), Gaps = 14/282 (4%)
Query: 23 QSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPL 82
++G VM +++ A + S I+A+TG+NGKSTV T V ++ GI GGNLG P
Sbjct: 88 KAGITVMGDIELFALLA--SAPIIAITGSNGKSTVTTLVSEIARKAGIMVATGGNLGTPA 145
Query: 83 SEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNY 142
E LP S P+ ++E+SS+Q++ F P V+ +LNL+PDHL+ H Y
Sbjct: 146 LE------LLPESGPEPAWYILELSSFQLDACTT-FRPRVAAILNLSPDHLDWHGDYAQY 198
Query: 143 ALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVP 202
K +F +M N L+ G ++ G + I F ++A + +
Sbjct: 199 GAAKARIFQNM-NAGDVLVLNGEDAFTSSLPGQVPDSVAIRCFAVHDERSDAYVLNDRLT 257
Query: 203 AVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIV 262
+ L ++++ G HN NA AAL + A+ PHR+ V
Sbjct: 258 LRNSGALLPAADLRMQGGHNIENALAAALLAEAAQF--PLAAIQEVFCQFSGLPHRLAWV 315
Query: 263 HRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
+ QGV + DDSK TNL AT + L G V++LGG K
Sbjct: 316 A-EYQGVNYYDDSKGTNLGATLKAMSGLSG-PLVMILGGDVK 355
>gi|146291592|ref|YP_001182016.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Shewanella
putrefaciens CN-32]
gi|145563282|gb|ABP74217.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Shewanella
putrefaciens CN-32]
Length = 439
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 151/314 (48%), Gaps = 37/314 (11%)
Query: 22 LQSGKRVMSELD-FAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
L G V+ +++ FA ++ R ++ +TG+NGKSTV T VG+ML G+ VGGN+G
Sbjct: 87 LDMGIEVIGDVELFAREIADRKPCVIGITGSNGKSTVTTLVGEMLREAGMAVAVGGNIGV 146
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMK 140
P AL ++ V+E+SS+Q+E + C S LN+T DH++R+ M
Sbjct: 147 P---------ALDLLSENAEIFVLELSSFQLETTHSLNC-VASTCLNVTEDHMDRYSDMD 196
Query: 141 NYALTKCHLF---SHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTA 197
Y K L+ ++ + L + +N+ + F LA D++
Sbjct: 197 AYRKAKLRLYHQSRSIIFNRDDALTIPTEPMNQ----NSFGLAPPEGDEWGICDSKIYHG 252
Query: 198 SFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPH 257
E+ + + + ++G HN+ N +AA++++ +GVD + + H
Sbjct: 253 RSEI--------MPITEVSLIGSHNHAN-LLAAMALV-YAVGVDKQVIAKVARTFTGLSH 302
Query: 258 RMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGH--KCVILLGGQAKVLNGQESNGFE 315
R ++V GVT+V+DSKATN+ AT L L H +++ GG K + F
Sbjct: 303 RCEVVGIK-GGVTYVNDSKATNVGATVAALDGLSDHLGDIILIAGGDGKGAD------FS 355
Query: 316 KLIEPLNHHRCVIT 329
L+EPL+ +IT
Sbjct: 356 PLVEPLSKVTHLIT 369
>gi|146328783|ref|YP_001209872.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Dichelobacter
nodosus VCS1703A]
gi|146232253|gb|ABQ13231.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Dichelobacter
nodosus VCS1703A]
Length = 436
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 90/282 (31%), Positives = 143/282 (50%), Gaps = 39/282 (13%)
Query: 17 GLACLLQSGKRV----MSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEA 72
G+ C + K + M++++ A++I + + AVTG+NGKSTVVT + +G++
Sbjct: 73 GIDCRRTAFKNIHATLMNDVELFARLIEKPVA--AVTGSNGKSTVVTMLADAARAVGLKT 130
Query: 73 FVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPT----VSVVLNL 128
+ GN+G + A P + V+E+SSYQ+E CP+ V VVLN+
Sbjct: 131 QLCGNIGKSVLTAWLEDEEEPD------LYVLELSSYQLE-----RCPSLMIDVGVVLNV 179
Query: 129 TPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGV 188
TPDHL+R+ + +Y K HL T+L +L +++ + R + F G
Sbjct: 180 TPDHLDRYDSFLDYVAAKSHLAQQ---TQLTILNGDDEYCRQMAPLSRQTV-----FFGA 231
Query: 189 KIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAAL--SVLGLDIGVDVEALN 246
+ + + V V++ +L K+ G+HN +NA VA L S LG+DI +EAL
Sbjct: 232 QCVNRVENGAIIVNGQTVLTADEL---KIHGQHNAYNALVALLMASGLGIDISYTLEALK 288
Query: 247 STIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLM 288
+ R PHRM V V W++DSKATN+ +T L+
Sbjct: 289 N----FRGLPHRMCEVAC-FNDVLWLNDSKATNIASTAAALV 325
>gi|148828296|ref|YP_001293049.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Haemophilus
influenzae PittGG]
gi|166224763|sp|A5UIR0.1|MURD_HAEIG RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|148719538|gb|ABR00666.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Haemophilus
influenzae PittGG]
Length = 437
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 159/333 (47%), Gaps = 46/333 (13%)
Query: 5 WLFLLEFQLKATGLA-------CLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTV 57
WL + + + GLA L++G V+ +++ + + I + +TG+NGKSTV
Sbjct: 62 WLLESDMIVISPGLAVKTPEIQTALKAGVEVIGDIELFCRAATKPI--VGITGSNGKSTV 119
Query: 58 VTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY 117
T V +M G++ +GGN+G P AL ++ V+E+SS+Q+E
Sbjct: 120 TTLVYEMAKAAGVKVGMGGNIGIP---------ALSLLNEDCELYVLELSSFQLETTYSL 170
Query: 118 FCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGL------LPFGNQHLNEA 171
V+ VLN+T DH++R+ +++Y K + N K+G+ L FG NE
Sbjct: 171 KAAAVT-VLNVTEDHMDRYMDLEDYRQAKLRIHH---NAKVGVLNNEDRLTFGE---NEN 223
Query: 172 IKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAAL 231
H + A A +K + + + + L ++GRHNY N + A
Sbjct: 224 QAKHTVSFAENSADYWLKTENGKQYLMVKDEVI-----LPCEEATLVGRHNYMN--ILAA 276
Query: 232 SVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLK 291
+ L IG++++++ + + + HR Q+VH+ G+ W++DSKATN+ +T L L
Sbjct: 277 TALAQAIGINLDSIRTALRHFKGLDHRFQLVHQ-ANGIRWINDSKATNVGSTVAALAGLY 335
Query: 292 GH-KCVILLGGQAKVLNGQESNGFEKLIEPLNH 323
K +LLGG K + F +L E +N
Sbjct: 336 IEGKLHLLLGGDGKGAD------FSELAELINQ 362
>gi|258514340|ref|YP_003190562.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
[Desulfotomaculum acetoxidans DSM 771]
gi|257778045|gb|ACV61939.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Desulfotomaculum
acetoxidans DSM 771]
Length = 449
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 158/313 (50%), Gaps = 28/313 (8%)
Query: 25 GKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSE 84
G V+ EL+ AA+ I ++A+TGTNGK+T + +G++ + GI+ V GN+G PL
Sbjct: 89 GIEVIGELELAARFI--KAPVVAITGTNGKTTTTSLIGEIFRNNGIKTLVAGNIGLPL-- 144
Query: 85 AAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYAL 144
+ P + V EVSS+Q+E +F P V+V+LN+TPDHL+RH TM+NYA
Sbjct: 145 ----VTEVEKYGPG-DIIVAEVSSFQLET-TVHFRPNVAVILNITPDHLDRHATMQNYAQ 198
Query: 145 TKCHLFSHMVNTKLGLLPFGNQ---HLNEAIKGHRFNLAWIGAFP-GVKIDTEAKTASFE 200
K +++ +++ +L + + L + G + GV + E A+ +
Sbjct: 199 AKANIYKQQLSSDYTVLNYDDSLTASLAVKVPGRVIFFSRKHILDRGVFVRNEEIIAALD 258
Query: 201 VPAVGVVSQLQLHNMKVMGRHNYHN--AAVAALSVLGLDIGVDVEALNSTIEILRTPPHR 258
+ ++ +K+ G HN N A+VAA G +GV + L +T++ HR
Sbjct: 259 GDETAIC---RVDEVKIPGAHNLENALASVAA----GFVLGVGRQVLANTLKTFPGVEHR 311
Query: 259 MQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
++ V +I GV +++DSK TN +A GL V++ GG+ K G + F +
Sbjct: 312 LEFVA-EINGVRYINDSKGTNPDAAVKGLQAYS-QPIVLIAGGRNK---GSDFKEFMQAA 366
Query: 319 EPLNHHRCVITEC 331
+ V+ EC
Sbjct: 367 KEKVRTMVVLGEC 379
>gi|145630236|ref|ZP_01786018.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Haemophilus
influenzae R3021]
gi|144984517|gb|EDJ91940.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Haemophilus
influenzae R3021]
Length = 437
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 158/333 (47%), Gaps = 46/333 (13%)
Query: 5 WLFLLEFQLKATGLA-------CLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTV 57
WL + + + GLA L++G V+ +++ + + I + +TG+NGKSTV
Sbjct: 62 WLLESDMIVISPGLAVKTPEIQTALKAGVEVIGDIELFCRAATKPI--VGITGSNGKSTV 119
Query: 58 VTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY 117
T V +M G++ +GGN+G P AL ++ V+E+SS+Q+E
Sbjct: 120 TTLVYEMAKAAGVKVGMGGNIGIP---------ALSLLNEDCELYVLELSSFQLETTYS- 169
Query: 118 FCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGL------LPFGNQHLNEA 171
+ VLN+T DH++R+ +++Y K ++ N K+G+ L FG NE
Sbjct: 170 LKAAAATVLNVTEDHMDRYMDLEDYRQAKLRIYH---NAKVGVLNNEDRLTFGE---NEN 223
Query: 172 IKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAAL 231
H + A A +K + + + + L ++GRHNY N + A
Sbjct: 224 QAKHTVSFAENSADYWLKTENGKQYLMVKDEVI-----LPCEEATLVGRHNYMN--ILAA 276
Query: 232 SVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLK 291
+ L IG++++++ + + + HR Q+ H+ G+ W++DSKATN+ +T L L
Sbjct: 277 TALAQAIGINLDSIRTALRHFKGLDHRFQLAHQ-ANGIRWINDSKATNVGSTVAALAGLY 335
Query: 292 GH-KCVILLGGQAKVLNGQESNGFEKLIEPLNH 323
K +LLGG K + F +L E +N
Sbjct: 336 IEGKLHLLLGGDGKGAD------FSELAELINQ 362
>gi|359727430|ref|ZP_09266126.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Leptospira weilii
str. 2006001855]
Length = 463
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/297 (32%), Positives = 137/297 (46%), Gaps = 58/297 (19%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V SE+D KI+ VTGT+GKST + V +L + GGNLG P +
Sbjct: 89 VFSEIDLGRFFFKG--KIIGVTGTDGKSTTTSLVSHLLKKDFSDLKEGGNLGVPFTSFCK 146
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
I+L AV+E+SSYQ+E VSV LNL DHLERHKTM+NY K
Sbjct: 147 ESISL---------AVLELSSYQLEDSFPLHL-NVSVFLNLAADHLERHKTMENYFRAKL 196
Query: 148 HL-------FSHMVNTKL------------GLLPFGNQHLNEAIKGHRFNLAWIGAFPGV 188
+ S +V+ K+ LL FG +EA+
Sbjct: 197 KIADLSNRDHSLIVSEKIREKILNSSSVRCKLLSFGRTTTSEAVLDEN------------ 244
Query: 189 KIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNST 248
+E +T+ F V +S+ L G HN N A A L+ IG E++ S
Sbjct: 245 --SSEIRTSKF----VYDISRFYLP-----GTHNRENLAAAILASEA--IGGKPESIQSQ 291
Query: 249 IEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKG-HKCVILLGGQAK 304
I + + PHR QI + QG+++++DSK+TNL + G+ K + ++LGG+ K
Sbjct: 292 IPLFKGLPHRFQIAG-ERQGISFINDSKSTNLHSMLAGMSTWKNLDQTCLILGGRPK 347
>gi|410465721|ref|ZP_11318936.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Desulfovibrio
magneticus str. Maddingley MBC34]
gi|409981237|gb|EKO37833.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Desulfovibrio
magneticus str. Maddingley MBC34]
Length = 442
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 125/258 (48%), Gaps = 37/258 (14%)
Query: 25 GKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSE 84
G +V+SEL+ A+ P I+AVTG+NGK+T V + +L G F GGN+G PL++
Sbjct: 99 GAQVVSELELASWFTPE--PIVAVTGSNGKTTTVMLISALLEAAGRRVFTGGNIGTPLAD 156
Query: 85 AAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYAL 144
H + S +P V V+EVSS+Q+++ K F P V+V+LN +HL+ H + Y
Sbjct: 157 ---HVL---SEEPA-DVVVLEVSSFQLQL-AKTFRPKVAVLLNFAANHLDWHADLDEYLD 208
Query: 145 TKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAV 204
K +F+ ++ ++ L + + G F A + + A + F P
Sbjct: 209 AKLKIFAAQRPDDTAIV---SEELRDLLGGRPFTRAGVTWY--------AAASGFLCP-- 255
Query: 205 GVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHR 264
++ G HN N A L+ GVD++ PHR+QI+
Sbjct: 256 -----------RLAGVHNQANMEAAYLACRAF--GVDIDLARQVFADFVPAPHRIQIIG- 301
Query: 265 DIQGVTWVDDSKATNLEA 282
+ GV +VDDSKAT + A
Sbjct: 302 EKGGVLFVDDSKATTVTA 319
>gi|456875047|gb|EMF90281.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Leptospira
santarosai str. ST188]
Length = 462
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 134/279 (48%), Gaps = 22/279 (7%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V SE+D KI+ VTGT+GKST + +L + GGNLG P +
Sbjct: 89 VFSEIDLGRFFFKG--KIIGVTGTDGKSTTTSLTAHLLRKDFSDLREGGNLGTPFTSFCK 146
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
I+L AV+E+SSYQ++ N VSV LNL PDHLERH TM+NY K
Sbjct: 147 KPISL---------AVLELSSYQLDDSNPLHL-DVSVFLNLAPDHLERHTTMENYFQAKL 196
Query: 148 HLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVV 207
+ + + N L+ ++E IK NLA T A A + + +
Sbjct: 197 KI-ADLQNENHFLI------VSEKIKESILNLASFRCKLLSFGRTSASDAFLDENSSKIG 249
Query: 208 SQLQLHNMKVMGRHNYHNAAVAALSVLGLD-IGVDVEALNSTIEILRTPPHRMQIVHRDI 266
+ ++++ HN A S+L + IG E++ + I + + PHR QI
Sbjct: 250 TSKFVYDISGFHLPGTHNGENLAASILAAEAIGGKPESIQAQIPLFKGLPHRFQIAGEK- 308
Query: 267 QGVTWVDDSKATNLEATCTGLMDLKG-HKCVILLGGQAK 304
QG+++++DSK+TNL + G+ K + ++LGG+ K
Sbjct: 309 QGISFINDSKSTNLHSMLAGMSTWKNLDRTCLILGGRPK 347
>gi|331083028|ref|ZP_08332147.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Lachnospiraceae
bacterium 6_1_63FAA]
gi|330399765|gb|EGG79426.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Lachnospiraceae
bacterium 6_1_63FAA]
Length = 457
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/301 (30%), Positives = 150/301 (49%), Gaps = 44/301 (14%)
Query: 12 QLKATGLACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIE 71
Q+KA G+ V E++ A Q+ ++ LA+TGTNGK+T +G+++
Sbjct: 91 QIKAVGIP--------VWGEIELAYQMSAGTV--LAITGTNGKTTTTALLGEIMKAYADS 140
Query: 72 AFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPD 131
FV GN+GNP ++A AL ++ + VA E+SS+Q+E + F P VS +LN+T D
Sbjct: 141 VFVVGNIGNPYTDA-----ALSMTEDSYTVA--EISSFQLETIDT-FAPKVSAILNITED 192
Query: 132 HLERHKTMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWI--------- 182
HL RH TM+ Y K + ++ +L + ++ L G R +
Sbjct: 193 HLNRHHTMEEYIRVKELITANQTKEDYCILNYEDEVLRAF--GERCPAKTVFFSSERKLG 250
Query: 183 -GAF-PGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGV 240
GAF G I + T + E+ G +K++G+HNY N V A S + GV
Sbjct: 251 KGAFLDGDAICLKTDTETLEIVKTG--------ELKILGKHNYEN--VMAASAMAYYTGV 300
Query: 241 DVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLG 300
VE ++ I R HR++ V +I G+ + +DSK TN +A G+ + ++ +L+G
Sbjct: 301 PVEVIHKAITEFRAVAHRIEFVD-EINGIAYYNDSKGTNPDAAIKGIQAM--NRPTLLIG 357
Query: 301 G 301
G
Sbjct: 358 G 358
>gi|225077400|ref|ZP_03720599.1| hypothetical protein NEIFLAOT_02461 [Neisseria flavescens
NRL30031/H210]
gi|224951284|gb|EEG32493.1| hypothetical protein NEIFLAOT_02461 [Neisseria flavescens
NRL30031/H210]
Length = 445
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 144/289 (49%), Gaps = 30/289 (10%)
Query: 23 QSGKRVMSELDFAAQVI-PRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
Q+G RV+ +++ A ++ R K++A+TG+NGK+TV + VG + G++ + GN+G P
Sbjct: 89 QNGGRVLGDIELLADIVNRRGDKVIAITGSNGKTTVTSLVGYLCIKCGLDTVIAGNIGTP 148
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
+ EA L K V V+E+SS+Q+E + PT + VLN++ DHL+R+ + +
Sbjct: 149 VLEA-----ELQREGKKADVWVLELSSFQLE-NTESLRPTAATVLNISEDHLDRYDDLLD 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLN------EAIKGHRFNLAWIGAFPGVKIDTEAK 195
YA TK +F G Q LN A+K + W E +
Sbjct: 203 YAHTKAKIFRGD----------GVQVLNSDDVFCRAMKRAGREVKWFSLEHEADFWLERE 252
Query: 196 TASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTP 255
T + +++ N+ + G H + A V A L +G+ EAL ++ +
Sbjct: 253 TGRLKQDDEDLIAT---QNIPLQGLH--NAANVMAAVALCEAVGLQREALLEHVKTFQGL 307
Query: 256 PHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
PHR++ + + GV ++DDSK TN+ AT + L+ + ++LGG K
Sbjct: 308 PHRVEKIG-EKNGVVFIDDSKGTNVGATAAAIAGLQ-NPLFVILGGMGK 354
>gi|145641278|ref|ZP_01796858.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Haemophilus
influenzae R3021]
gi|145274115|gb|EDK13981.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Haemophilus
influenzae 22.4-21]
Length = 437
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 158/333 (47%), Gaps = 46/333 (13%)
Query: 5 WLFLLEFQLKATGLA-------CLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTV 57
WL + + + GLA L++G V+ +++ + + I + +TG+NGKSTV
Sbjct: 62 WLLESDMIVISPGLAVKTLEIQTALKAGVEVIGDIELFCRAATKPI--VGITGSNGKSTV 119
Query: 58 VTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY 117
T V +M G++ +GGN+G P AL ++ V+E+SS+Q+E
Sbjct: 120 TTLVYEMAKAAGVKVGMGGNIGIP---------ALSLLNEDCELYVLELSSFQLETTYS- 169
Query: 118 FCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGL------LPFGNQHLNEA 171
+ VLN+T DH++R+ +++Y K ++ N K+G+ L FG NE
Sbjct: 170 LKAAAATVLNVTEDHMDRYMDLEDYRQAKLRIYH---NAKVGVLNNEDRLTFGE---NEN 223
Query: 172 IKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAAL 231
H + A A +K + + + + L ++GRHNY N + A
Sbjct: 224 QAKHTVSFAENSADYWLKTENGKQYLMVKDEVI-----LPCEEATLVGRHNYMN--ILAA 276
Query: 232 SVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLK 291
+ L IG++++++ + + + HR Q+ H+ G+ W++DSKATN+ +T L L
Sbjct: 277 TALAQAIGINLDSIRTALRHFKGLDHRFQLAHQ-ANGIRWINDSKATNVGSTVAALAGLY 335
Query: 292 GH-KCVILLGGQAKVLNGQESNGFEKLIEPLNH 323
K +LLGG K + F +L E +N
Sbjct: 336 IEGKLHLLLGGDGKGAD------FSELAELINQ 362
>gi|417780413|ref|ZP_12428175.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Leptospira
weilii str. 2006001853]
gi|410779455|gb|EKR64071.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Leptospira
weilii str. 2006001853]
Length = 463
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/297 (31%), Positives = 135/297 (45%), Gaps = 58/297 (19%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V SE+D KI+ VTGT+GKST + V +L + GGNLG P +
Sbjct: 89 VFSEIDLGRFFFKG--KIIGVTGTDGKSTTTSLVSHLLKKDFSDLKEGGNLGVPFTSFCK 146
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
I+L AV+E+SSYQ+E VSV LNL DHLERHKTM+NY K
Sbjct: 147 ESISL---------AVLELSSYQLEDSFPLHL-NVSVFLNLAADHLERHKTMENYFRAKL 196
Query: 148 H-----------LFSHMVNTKL--------GLLPFGNQHLNEAIKGHRFNLAWIGAFPGV 188
+ S + K+ LL FG +EA+
Sbjct: 197 KIADLSNRDHSLIVSEKIREKILNSSSVRCKLLSFGRTTTSEAVLDEN------------ 244
Query: 189 KIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNST 248
+E +T+ F V +S+ L G HN N A A L+ IG E++ S
Sbjct: 245 --SSEIRTSKF----VYDISRFYLP-----GTHNRENLAAAILASEA--IGGKPESIQSQ 291
Query: 249 IEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKG-HKCVILLGGQAK 304
I + + PHR QI + QG+++++DSK+TNL + G+ K + ++LGG+ K
Sbjct: 292 IPLFKGLPHRFQIAG-ERQGISFINDSKSTNLHSMLAGMSTWKNLDQTCLILGGRPK 347
>gi|282857257|ref|ZP_06266497.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Pyramidobacter
piscolens W5455]
gi|282584907|gb|EFB90235.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Pyramidobacter
piscolens W5455]
Length = 436
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/285 (32%), Positives = 136/285 (47%), Gaps = 39/285 (13%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V ELD A + KI+AVTGTNGK+T + +L + G+ A GN+GNPL+ A
Sbjct: 90 VQGELDLLAPFLKG--KIIAVTGTNGKTTCTALIAHLLRNAGLNAVSAGNIGNPLAAHA- 146
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
+ V+E+SS+Q+ N P V+V+ NL PDHL+ H + +NY KC
Sbjct: 147 --------DRSYDAIVMELSSFQLHW-NTQLRPDVAVLTNLAPDHLDWHGSYENYKNDKC 197
Query: 148 HLFSHMVNTKLGLLP-----FGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVP 202
+F LP + H +A + ++ID + + +V
Sbjct: 198 KIF----------LPRQEECYAVTHDVDAFRVPAGRAVCALGRGNLRIDMDGR----DVF 243
Query: 203 AVG-VVSQLQLH--NMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRM 259
VG +L H ++K++G HN NAA++ +V VD A + E L HR
Sbjct: 244 LVGHGRRRLLFHKSSLKLLGSHNLENAAMSCAAVALAFRDVDPSAGLAGFEALH---HRC 300
Query: 260 QIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
+ V GV ++DDSK TN+ A L + G K +I+LGGQ K
Sbjct: 301 EPVGEQ-NGVLFIDDSKGTNVAAVIAALHSINGRK-LIILGGQGK 343
>gi|288574849|ref|ZP_06393206.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Dethiosulfovibrio
peptidovorans DSM 11002]
gi|288570590|gb|EFC92147.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Dethiosulfovibrio
peptidovorans DSM 11002]
Length = 453
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 97/299 (32%), Positives = 157/299 (52%), Gaps = 38/299 (12%)
Query: 23 QSGKRVMSELDFAAQVIPR-SIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
+G +VM E+DF V+P+ K++ VTGTNGK+T + + +L G++A GN+G+P
Sbjct: 89 DAGIKVMGEVDF---VLPKLDGKVVVVTGTNGKTTTTSLIAHLLEVSGLDALALGNIGSP 145
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
L + A + V V+E+SS+Q+ K +SV+ N+ PDH++ H + +N
Sbjct: 146 LGDFAGE---------RRDVFVIELSSFQLHWTEKSEF-DISVITNIAPDHIDWHGSYEN 195
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIG-------AFPGVKIDTEA 194
Y K SH +T ++ Q + ++ G + + IG G+ I+ E
Sbjct: 196 YISAKKKAISHRRDTGWSIV----QEKDRSLLGGQSDPRTIGLTLENDLKKDGIFINNER 251
Query: 195 KTASFEVPAVGVVSQLQL-HNMKVMGRHNYHNAAVAALS-VLGLDIGVDVEALNSTIEIL 252
A E GV L + + ++G HN NAA+AA + +L +D + +
Sbjct: 252 AIAVIE----GVRHDLFMSKQVPLLGGHNIENAAMAATACILSSSRKID---WSMGLASY 304
Query: 253 RTPPHRMQ-IVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQE 310
+ PPHR Q IV +D G+++VDDSK TN+ +TCT L + G K V++LGG+ K N +E
Sbjct: 305 QAPPHRCQFIVEKD--GISYVDDSKGTNVASTCTALRSIPGGK-VVILGGKGKGENYRE 360
>gi|260589604|ref|ZP_05855517.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Blautia
hansenii DSM 20583]
gi|260540172|gb|EEX20741.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Blautia
hansenii DSM 20583]
Length = 457
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/301 (30%), Positives = 150/301 (49%), Gaps = 44/301 (14%)
Query: 12 QLKATGLACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIE 71
Q+KA G+ V E++ A Q+ ++ LA+TGTNGK+T +G+++
Sbjct: 91 QIKAAGIP--------VWGEIELAYQMSAGTV--LAITGTNGKTTTTALLGEIMKAYADS 140
Query: 72 AFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPD 131
FV GN+GNP ++A AL ++ + VA E+SS+Q+E + F P VS +LN+T D
Sbjct: 141 VFVVGNIGNPYTDA-----ALSMTEDSYTVA--EISSFQLETIDT-FAPKVSAILNITED 192
Query: 132 HLERHKTMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWI--------- 182
HL RH TM+ Y K + ++ +L + ++ L G R +
Sbjct: 193 HLNRHHTMEEYIRVKELITANQTKEDYCILNYEDEVLRAF--GERCPAKTVFFSSERKLE 250
Query: 183 -GAF-PGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGV 240
GAF G I + T + E+ G +K++G+HNY N V A S + GV
Sbjct: 251 KGAFLDGDAICLKTDTETLEIVKTG--------ELKILGKHNYEN--VMAASAMAYYTGV 300
Query: 241 DVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLG 300
VE ++ I R HR++ V +I G+ + +DSK TN +A G+ + ++ +L+G
Sbjct: 301 PVEVIHKAITEFRAVAHRIEFVD-EINGIAYYNDSKGTNPDAAIKGIQAM--NRPTLLIG 357
Query: 301 G 301
G
Sbjct: 358 G 358
>gi|389577327|ref|ZP_10167355.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Eubacterium
cellulosolvens 6]
gi|389312812|gb|EIM57745.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Eubacterium
cellulosolvens 6]
Length = 452
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 132/259 (50%), Gaps = 14/259 (5%)
Query: 44 KILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAV 103
K+LAVTGTNGK+T VT +G+++ E +V GN+G P ++ + L ++ + VA
Sbjct: 108 KVLAVTGTNGKTTTVTLLGEIMKDYYPEVYVVGNIGTPYTD-----VVLQQTENAWTVA- 161
Query: 104 VEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPF 163
EVSS+QME + F P S + N+T DHL RH TM+ Y K + + +L +
Sbjct: 162 -EVSSFQMETIEE-FHPVASALTNITEDHLNRHHTMEEYIRCKARVTENQTAEDCCVLNY 219
Query: 164 GNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVG-VVSQLQLHNMKVMGRHN 222
++ L + + + + ++ + + + G V+ ++ +++++G HN
Sbjct: 220 EDEVLRPFAEKVNAKVIFFSSRRVLEKGIYLEGDTIRLKDGGEVIDVVKTGDLQLLGLHN 279
Query: 223 YHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEA 282
+ N VA + GV ++++ TI R HR++ V +GV + +DSK TN +A
Sbjct: 280 FENVMVAV--AMAYFAGVPMDSIRRTICAFRGVEHRIEFVEEK-KGVRYYNDSKGTNPDA 336
Query: 283 TCTGLMDLKGHKCVILLGG 301
G+ + C L+GG
Sbjct: 337 AIKGIQAMDRPTC--LIGG 353
>gi|429462548|ref|YP_007184011.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Candidatus
Kinetoplastibacterium crithidii (ex Angomonas deanei
ATCC 30255)]
gi|451811697|ref|YP_007448152.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Candidatus
Kinetoplastibacterium crithidii TCC036E]
gi|429338062|gb|AFZ82485.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Candidatus
Kinetoplastibacterium crithidii (ex Angomonas deanei
ATCC 30255)]
gi|451776855|gb|AGF47854.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Candidatus
Kinetoplastibacterium crithidii TCC036E]
Length = 498
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 146/289 (50%), Gaps = 39/289 (13%)
Query: 44 KILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCI---ALPSSKPKFQ 100
KI+A+TGTNGK+TV + ++L G+ GN+G P+ +A + LP +
Sbjct: 127 KIIAITGTNGKTTVTSLTYEILKKSGVLVCKAGNIGPPVLKALMDEVEQDVLP------E 180
Query: 101 VAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLF---------- 150
V V+E+SS+Q+ K CP VSVVLNL DH++ H T+ +Y TK +L
Sbjct: 181 VWVLEISSFQLYTI-KSLCPDVSVVLNLDFDHIDWHGTVDSYWETKVNLLRISKTSIINR 239
Query: 151 ------SHMVNTKLGLLPFGNQ-HLNEAIKG--HRFNLAWIGAFPGVKIDTEAKTASFEV 201
M+N+K+ FG+ +++ G R + W+ F K ++ K ++ +
Sbjct: 240 NDHVLMQKMLNSKIDSYSFGSDVPTHDSCFGLVTREDSKWLVVFIEKKSNSLCKISNDDF 299
Query: 202 PAVGVVSQ------LQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTP 255
+ + L+ + +K+ G HNY N +A+L ++ + + L + + L
Sbjct: 300 NYKEDLKKGFNCYLLKSNLLKIRGIHNYTN-VLASLQLISFIMPLTSSMLKTACDYL-GE 357
Query: 256 PHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
PHR+Q V +I GV++ DDSK TN+ AT T L K ++++GG K
Sbjct: 358 PHRIQFV-AEIGGVSYFDDSKGTNISATITALKSFD-KKTILIMGGVGK 404
>gi|269468117|gb|EEZ79827.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [uncultured SUP05
cluster bacterium]
Length = 434
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 142/276 (51%), Gaps = 31/276 (11%)
Query: 37 QVIPRSIK--ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPS 94
++ R +K ++ +TG+NGKSTV +G M+ + + VGGN+G P A C+
Sbjct: 93 ELFSRFVKAPVIGITGSNGKSTVTQLLGDMITNSDKKVAVGGNIGKP----ALDCL---- 144
Query: 95 SKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMV 154
+ V+E+SSYQ++ N+ T VVLN+TPDHL+R+ + +Y +K L+ +
Sbjct: 145 -DDQIDYYVLELSSYQLDYTNQLKLLT-GVVLNITPDHLDRYDSFDDYTDSKLSLYRYCQ 202
Query: 155 NTKLGLLPFGNQHLNEAIKGHRFNLAWIG-AFPGVKIDTEAKT---ASFEVPAVGVVSQL 210
+ + +L+E I + N G P D T + + + VV +
Sbjct: 203 DLVV--------NLDEVIVPKKNNAKHFGIDMPKRADDFGTVTCHGSCYLIKGDDVV--M 252
Query: 211 QLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVT 270
+ M+++G HN N +AAL+ LG IG+ VE + +I+ + HR++ V + QGV
Sbjct: 253 SVSEMQLIGEHNVAN-MLAALA-LGDQIGLSVELMAQSIKNFKGLEHRLEWVAKK-QGVD 309
Query: 271 WVDDSKATNLEATCTGLMDL--KGHKCVILLGGQAK 304
+ +DSKATN +T L L K V++ GG AK
Sbjct: 310 YYNDSKATNSISTIQALKALIDKHENIVLIAGGIAK 345
>gi|261855069|ref|YP_003262352.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Halothiobacillus
neapolitanus c2]
gi|261835538|gb|ACX95305.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Halothiobacillus
neapolitanus c2]
Length = 471
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 147/313 (46%), Gaps = 37/313 (11%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V ++D A + ++ +TG+NGKSTV VG++LN G+ A VGGN G P
Sbjct: 91 VRGDIDLALHA--SDVPVVLITGSNGKSTVTALVGELLNAAGVSAVVGGNFGTP------ 142
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPN-----KYFCPTVSVVLNLTPDHLERHKTMKNY 142
AL V V+EVSS+Q+E + P + VLN++ DHL+RH T+ +Y
Sbjct: 143 ---ALDLLTTDADVLVLEVSSFQLESTDFSGLAPAQMPRAATVLNISQDHLDRHGTLAHY 199
Query: 143 ALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIG-AFPGVKIDTEAKTASFEV 201
A K + + + +L + + + ++ W G A P D T + E
Sbjct: 200 AAIKE---TALHQARRAVLNRDDPMVAAMAERASGDVIWFGTAMPTQPSDFGLMTIAGES 256
Query: 202 ------PAVGVVSQLQLHNMKVMGRHNYHN--AAVAALSVLGLDIGVDVEALNSTIEILR 253
+S L + + + GRHN N AA+A + + D+ ++ + L + +
Sbjct: 257 WLIQAQANATALSILPVQALGLTGRHNQMNVLAALALIQAVVPDVALNDDRLLNVLRQFT 316
Query: 254 TPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNG 313
PHR Q V I GV ++DDSKATN+ A ++ + V++ GGQ K GQ+
Sbjct: 317 GLPHRAQSVGV-INGVRFIDDSKATNVGAAVAAILGMPA-PLVLIAGGQGK---GQD--- 368
Query: 314 FEKLIEPLNHHRC 326
F L E L RC
Sbjct: 369 FAPLAESL-VGRC 380
>gi|114045894|ref|YP_736444.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Shewanella
sp. MR-7]
gi|113887336|gb|ABI41387.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Shewanella sp.
MR-7]
Length = 439
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 149/314 (47%), Gaps = 37/314 (11%)
Query: 22 LQSGKRVMSELD-FAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
L G V+ +++ FA ++ R +L +TG+NGKSTV T VG+ML G+ VGGN+G
Sbjct: 87 LDMGIEVIGDVELFAREIADRKPCVLGITGSNGKSTVTTLVGEMLREAGMAVAVGGNIGI 146
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMK 140
P AL + V+E+SS+Q+E + C S LN+T DH++R+ M
Sbjct: 147 P---------ALDLLTENADIFVLELSSFQLETTHSLNC-VASTCLNVTEDHMDRYSDMD 196
Query: 141 NYALTKCHLF---SHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTA 197
Y K L+ ++ + L + +N+ + F LA D++
Sbjct: 197 AYRKAKLRLYHQSRSIIFNRDDALTIPTEPMNQ----NSFGLAPPEGDEWGICDSKIYHG 252
Query: 198 SFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPH 257
E+ + + + ++G HN+ N +AA++++ +GVD + + H
Sbjct: 253 HSEI--------MPITEVSLIGSHNHAN-LLAAMALV-YAVGVDKQVMAKVARTFTGLSH 302
Query: 258 RMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGH--KCVILLGGQAKVLNGQESNGFE 315
R ++V GVT+V+DSKATN+ AT L L H +++ GG K + F
Sbjct: 303 RCEVVGVK-AGVTYVNDSKATNVGATVAALDGLSDHLGDIILIAGGDGKGAD------FS 355
Query: 316 KLIEPLNHHRCVIT 329
L+EPL +IT
Sbjct: 356 PLVEPLTKVTHLIT 369
>gi|167626512|ref|YP_001677012.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Francisella
philomiragia subsp. philomiragia ATCC 25017]
gi|189082909|sp|B0TZ72.1|MURD_FRAP2 RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|167596513|gb|ABZ86511.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Francisella
philomiragia subsp. philomiragia ATCC 25017]
Length = 414
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 136/281 (48%), Gaps = 38/281 (13%)
Query: 26 KRVMSELDFAAQVIPRS-IKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSE 84
++++S++D Q I + K++AVTG+NGKST+VT + +L +G ++ + GN+G P
Sbjct: 79 QKIVSDIDLFYQSIRNTKAKMIAVTGSNGKSTIVTMLDFVLRDMGYKSILVGNIGTP--- 135
Query: 85 AAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYAL 144
L KF VVEVSS+Q+++ N + V+N++ DHL+R+K + Y
Sbjct: 136 ------PLNKIGEKFDYCVVEVSSFQIDLFNS-VEFDLGCVVNVSLDHLDRYKNYEEYK- 187
Query: 145 TKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAV 204
+KL L F + H + + G + V+ T
Sbjct: 188 ----------QSKLNLAKFSKDFFVYDV--HNTGIKYAGEYQIVRGSIYKDTTKL----- 230
Query: 205 GVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHR 264
L + + G HN N V L++ G+D+ + I+ + HR +IV +
Sbjct: 231 -----LDITETNLFGEHNLENIIV-VLNIFDR-FGIDISKAVAAIKKFKGLKHRCEIV-K 282
Query: 265 DIQGVTWVDDSKATNLEATCTGLMDLKGHKCVI-LLGGQAK 304
+I GVT+++DSK TN+ AT L + K +I LLGG AK
Sbjct: 283 NIAGVTYINDSKGTNVGATIAALNSITSSKNIILLLGGVAK 323
>gi|169334623|ref|ZP_02861816.1| hypothetical protein ANASTE_01026 [Anaerofustis stercorihominis DSM
17244]
gi|169259340|gb|EDS73306.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Anaerofustis
stercorihominis DSM 17244]
Length = 458
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 155/296 (52%), Gaps = 42/296 (14%)
Query: 46 LAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVE 105
+A+TGTNGK+T T VG++ + G + +V GN+GN A V +E
Sbjct: 116 IAITGTNGKTTTTTLVGEIFKNAGYDTYVNGNIGNSFINDA-------EKGDDNSVYALE 168
Query: 106 VSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSH-------MVNTKL 158
VSSYQ+E+ +K F P ++++ N+TPDHLERH T + Y K ++F + +VN +
Sbjct: 169 VSSYQLELNDK-FKPDIAIMTNITPDHLERHSTFEEYVRVKGNVFVNQDENDYLIVNKED 227
Query: 159 GLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEA----KTASFEVPAVGVVSQL-QLH 213
+L L+E K VK D A K + + G V L ++
Sbjct: 228 KIL----TGLSENAKSKVLTFT-------VKEDKNANAYLKDENIIIDFKGEVYPLIDIN 276
Query: 214 NMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVD 273
+K+ G HN N A+L+ + GV+ E L +T++ ++ HR++ V + G+ +++
Sbjct: 277 ELKLYGLHNVMNVMAASLAAVVK--GVEKETLINTLKNFKSVEHRIEYVDT-VDGIEYIN 333
Query: 274 DSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPLNHH-RCVI 328
DSK TN++AT T + +K K V++LGG K+ F++L++ +N + +C++
Sbjct: 334 DSKGTNVDATVTAMKAMK-KKTVLMLGGYDKM------TPFDELVKSINDNIKCIV 382
>gi|198274310|ref|ZP_03206842.1| hypothetical protein BACPLE_00454 [Bacteroides plebeius DSM 17135]
gi|198272800|gb|EDY97069.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Bacteroides
plebeius DSM 17135]
Length = 443
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 150/307 (48%), Gaps = 32/307 (10%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
L G ++SE++FA + + K++ +TG+NGK+T + + + G+ + GN+G
Sbjct: 82 LKNQGTPIISEIEFAGRYT--NAKMICITGSNGKTTTTSLIYHIFKKAGLNVGLAGNIGQ 139
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDHLERHK-T 138
L+ C + V+E+SS+Q++ N Y F ++V++N+TPDHL+R+
Sbjct: 140 SLAYQVAEC--------NYDYYVIELSSFQLD--NMYKFHANIAVLMNITPDHLDRYGFE 189
Query: 139 MKNYALTKCHLFSHMVNTKLGLL----PFGNQHLNE-AIKGHRFNLAWIGAFPGVKIDTE 193
M+NY K + + + + P + L++ I G F A GV TE
Sbjct: 190 MQNYVDAKFRIIQNQTDDDAFIFWNDDPIIQKELHKYGIHGQYFPFAEKNE-EGVAAFTE 248
Query: 194 AKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDI-GVDVEALNSTIEIL 252
F P + ++ + + G HN N+ A +S +I G+ E + +
Sbjct: 249 ENKVYFTRP---IAFNMEQEELALTGTHNLFNSMAAGISA---NIAGIRKECIREALNDF 302
Query: 253 RTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESN 312
+ HR++ V R ++GV +++DSKATN+ + L +K K +++LGG+ K G + N
Sbjct: 303 KGVEHRLEKVAR-VKGVDYINDSKATNVNSCWYALQSMKT-KTILILGGKDK---GNDYN 357
Query: 313 GFEKLIE 319
L++
Sbjct: 358 EIADLVK 364
>gi|372269624|ref|ZP_09505672.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
[Marinobacterium stanieri S30]
Length = 449
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 137/292 (46%), Gaps = 41/292 (14%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+A+TG+N KSTV T VGQM G+ VGGN+G P+ L + + V+
Sbjct: 111 IVAITGSNAKSTVTTLVGQMAEQAGLAVGVGGNIGTPM---------LDLLEQACDLYVL 161
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFG 164
E+SS+Q+E N+ V+ VLN++PDHL+R+ M++Y LTK ++ +L
Sbjct: 162 ELSSFQLETANE-LKAAVATVLNISPDHLDRYNGMQDYVLTKQRIYRGAAK----VLANR 216
Query: 165 NQHLNEAIKGHRFNLAWIG-AFPGVK----IDTEAKTASFEVPAVGVVSQLQLHNMKVMG 219
+ L + + L G P +K + E +T + G+ L + MK+ G
Sbjct: 217 DDQLTQPLMAQGVELKRFGLGAPDLKDYGLCEHEGETWLCQ----GLTPLLPVSAMKIRG 272
Query: 220 RHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIV--HRDIQGVTWVDDSKA 277
+HNY NA A +DI E S + HR Q V HR GV + +DSK
Sbjct: 273 QHNYANALAALALADAVDI--PREPALSALREFAGLEHRCQWVAEHR---GVGYFNDSKG 327
Query: 278 TNLEATCTGLMDL-----KGHKCVILLGGQAKVLNGQESNGFEKLIEPLNHH 324
TN+ AT L L +G++ ++L GG K F L PL +
Sbjct: 328 TNVGATLAALEGLGATLGEGNRLILLAGGVGK------DQAFGDLSAPLQRY 373
>gi|319897397|ref|YP_004135594.1| udp-n-acetylmuramoyl-l-alanine:d-glutamate ligase [Haemophilus
influenzae F3031]
gi|317432903|emb|CBY81269.1| UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase [Haemophilus
influenzae F3031]
Length = 437
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 157/333 (47%), Gaps = 46/333 (13%)
Query: 5 WLFLLEFQLKATGLA-------CLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTV 57
WL + + + GLA L++G V+ +++ + + I + +TG+NGKSTV
Sbjct: 62 WLLESDMIVISPGLAVKTPEIQTALKAGVEVIGDIELFCRTATKPI--VGITGSNGKSTV 119
Query: 58 VTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY 117
T V +M G++ +GGN+G P AL ++ V+E+SS+Q+E
Sbjct: 120 TTLVYEMAKAAGVKVGMGGNIGIP---------ALSLLNEDCELYVLELSSFQLETTYS- 169
Query: 118 FCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGL------LPFGNQHLNEA 171
+ VLN+T DH++R+ +++Y K ++ N K+G+ L FG NE
Sbjct: 170 LKAAAATVLNVTEDHMDRYMDLEDYRQAKLRIYH---NAKVGVLNNEDRLTFGE---NEN 223
Query: 172 IKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAAL 231
H + A A +K + + + + L ++GRHNY N + A
Sbjct: 224 QAKHTVSFAENSADYWLKTENGKQYLMVKDEVI-----LPCEEATLVGRHNYMN--ILAA 276
Query: 232 SVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLK 291
+ L IG++++++ + + + HR Q+ H G+ W++DSKATN+ +T L L
Sbjct: 277 TALAQAIGINLDSIRTALRHFKGLDHRFQLAHH-ANGIRWINDSKATNVGSTVAALAGLY 335
Query: 292 GH-KCVILLGGQAKVLNGQESNGFEKLIEPLNH 323
K +LLGG K + F +L E +N
Sbjct: 336 IEGKLHLLLGGDGKGAD------FSELAELINQ 362
>gi|406672326|ref|ZP_11079552.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bergeyella
zoohelcum CCUG 30536]
gi|405588014|gb|EKB61732.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bergeyella
zoohelcum CCUG 30536]
Length = 451
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 150/292 (51%), Gaps = 48/292 (16%)
Query: 14 KATGLACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAF 73
KA L + G R+ SE++FAA+ + KI+A+TG+NGK+T + + +L + G+
Sbjct: 84 KAGILQKIQAKGIRLSSEIEFAAEFT--NAKIIAITGSNGKTTTTSLIYHILKNAGLHVG 141
Query: 74 VGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQM-EIPNKYFCPTVSVVLNLTPDH 132
+GGN+G ++ + + V+EVSS+Q+ +I N F P ++++LNL+PDH
Sbjct: 142 LGGNIGTSFAKQV--------ADENYDYFVLEVSSFQLDDIQN--FQPYIALLLNLSPDH 191
Query: 133 LERHK-TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKID 191
L+++ ++YAL K + + N + + ++ +E +K KI+
Sbjct: 192 LDQYNYNYEDYALAKLRITENQKNHQFFIYNHEDEMTHELLK---------------KIE 236
Query: 192 TEAKTASFEVP------AVGVVSQ----------LQLHNMKVMGRHNYHNAAVAALSVLG 235
+AKT F + A V + ++++ + ++G+HN N + A S++G
Sbjct: 237 VKAKTLPFSLNEKLDEGAYATVDKIFVKLEEEFSMKINELPLVGKHNVAN--ILAASMVG 294
Query: 236 LDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGL 287
+ + E L + + R HR+++ +I GV +++DSKATN+ A L
Sbjct: 295 KLLHISDENLQNALMTFRAVEHRLELF-AEIDGVKYINDSKATNVNAAYYAL 345
>gi|381199860|ref|ZP_09907006.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Sphingobium
yanoikuyae XLDN2-5]
Length = 437
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 128/274 (46%), Gaps = 37/274 (13%)
Query: 44 KILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQ--- 100
K++ +TGTNGKST + ++ G A +GGN+G P+ + +P
Sbjct: 110 KVVGITGTNGKSTTTALIHHIIEQAGFPARMGGNIGLPI-------LGQEPLEPNLHGMG 162
Query: 101 VAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGL 160
V V+E+SSYQ+++ + C V+V+LN+TPDHL+R+ Y +K LF+ + +
Sbjct: 163 VYVLELSSYQIDLTHSLDC-DVAVLLNITPDHLDRYNGFAGYVASKARLFAMQSAEHVAV 221
Query: 161 LPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGR 220
+ ++ P I A EV A + + QL + G
Sbjct: 222 IATEDE-------------------PSRGIAASAPAQLREVKAADIDPEAQLGWPSLQGP 262
Query: 221 HNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNL 280
HN NAAVA +G +G+D + + + + PHRMQ V GV +V+DSKATN
Sbjct: 263 HNAQNAAVAI--AVGRALGIDDATIMAALASYASLPHRMQAVGTH-NGVLYVNDSKATNA 319
Query: 281 EATCT--GLMDLKGHKCVI--LLGGQAKVLNGQE 310
+T G + K I +LGG AK N E
Sbjct: 320 ASTAPALGAWPARDGKPRIHWILGGVAKSDNLDE 353
>gi|322436304|ref|YP_004218516.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Granulicella
tundricola MP5ACTX9]
gi|321164031|gb|ADW69736.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Granulicella
tundricola MP5ACTX9]
Length = 451
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 145/291 (49%), Gaps = 33/291 (11%)
Query: 25 GKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSE 84
G V+ EL+ A++ + S+ +A+TG+NGK+T T G++ + VGGN+G P+ +
Sbjct: 92 GTAVIGELELASRFLDGSV--IAITGSNGKTTTTTLTGKIFADAALPTLVGGNIGLPVID 149
Query: 85 AAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYAL 144
+ S+P+ +V+EVSS+Q+E F P +++VLN+TPDHL+RHKT + Y
Sbjct: 150 L------IAESRPE-TWSVLEVSSFQLETATT-FKPRIAMVLNVTPDHLDRHKTFERYWE 201
Query: 145 TKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWI--------GAFP-GVKIDTEAK 195
K + + + +L + + + R + W GAF G + K
Sbjct: 202 AKARITACQESEDFLILNAEDVNAQKMAAKTRAQIYWFSGRRQVKQGAFVHGESVFFLGK 261
Query: 196 TASFEVPAVGVVSQLQLHNMKVMGRHNYHN--AAVAALSVLGLDIGVDVEALNSTIEILR 253
P L + + + G HN N AAV A + G+D E + + ++ R
Sbjct: 262 EGGKPEPV------LPVSEIALKGAHNVENVLAAVCAARL----AGIDAETIRAAVKGFR 311
Query: 254 TPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
HR+++V R GV + +DSKATN++AT + G +I LGG+ K
Sbjct: 312 AVEHRLELV-RVRNGVEFYNDSKATNVDATVKAVESFAGGIHLI-LGGKDK 360
>gi|24375706|ref|NP_719749.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase MurD [Shewanella
oneidensis MR-1]
gi|30316031|sp|Q8E9P6.1|MURD_SHEON RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|24350640|gb|AAN57193.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase MurD [Shewanella
oneidensis MR-1]
Length = 439
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 150/314 (47%), Gaps = 37/314 (11%)
Query: 22 LQSGKRVMSELD-FAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
L G V+ +++ FA ++ R ++ +TG+NGK+TV T VG+ML GI VGGN+G
Sbjct: 87 LDMGIEVIGDVELFAREIADRKPCVIGITGSNGKTTVTTLVGEMLREAGIAVAVGGNIGI 146
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMK 140
P AL K + V+E+SS+Q+E + C S LN+T DH++R+ M
Sbjct: 147 P---------ALDLLKENADIFVLELSSFQLETTHSLNC-VASTCLNVTEDHMDRYSDMD 196
Query: 141 NYALTKCHLF---SHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTA 197
Y K L+ ++ + L + +N+ + F LA D++
Sbjct: 197 AYRKAKLRLYHQSRSIIFNRDDALTIPTEPMNQ----NSFGLAPPEGDEWGICDSKIYHG 252
Query: 198 SFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPH 257
E+ + VS ++G HN+ N +AA++++ +GVD + + + H
Sbjct: 253 HSEIMPITEVS--------LIGSHNHAN-LLAAMALV-YAVGVDKQVMANVARTFTGLSH 302
Query: 258 RMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGH--KCVILLGGQAKVLNGQESNGFE 315
R ++V GVT+V+DSKATN+ AT L L H +++ GG K + F
Sbjct: 303 RCEVVGVK-GGVTYVNDSKATNVGATVAALDGLSDHLGDIILIAGGDGKGAD------FS 355
Query: 316 KLIEPLNHHRCVIT 329
L EPL +IT
Sbjct: 356 PLEEPLTKVTHLIT 369
>gi|418465291|ref|ZP_13036228.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
[Aggregatibacter actinomycetemcomitans RhAA1]
gi|359756223|gb|EHK90382.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
[Aggregatibacter actinomycetemcomitans RhAA1]
Length = 434
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 151/314 (48%), Gaps = 41/314 (13%)
Query: 5 WLFLLEFQLKATGLA-------CLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTV 57
WL + + + GLA LQ+G V+ +++ + + + I +A+TG+NGKSTV
Sbjct: 61 WLLESDLIVISPGLAVKTPEIQTALQAGVEVVGDIELFCREVDKPI--VAITGSNGKSTV 118
Query: 58 VTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY 117
T V +M G+ +GGN+G P AL + + V+E+SS+Q+E Y
Sbjct: 119 TTLVAEMAKAAGLSVGMGGNIGIP---------ALSLLNQQHDLYVLELSSFQLE--TTY 167
Query: 118 FCPTV-SVVLNLTPDHLERHKTMKNYALTKCHLFSH----MVNTKLGL-LPFGNQHLNEA 171
V + VLN+T DH+ R+ +++Y K ++++H ++N + L LP + +
Sbjct: 168 SLKAVAATVLNVTEDHMNRYVDLQDYRHAKLNIYNHCQTAVINVEDALTLPTTQRPQKQV 227
Query: 172 IKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAAL 231
G W + TE V L MK+ GRHNY N A+A++
Sbjct: 228 SFGESNADYW--------LKTENNKTYLMAYDEAV---LACDEMKLTGRHNYMN-ALASI 275
Query: 232 SVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLK 291
+ L G+++ + + + HR Q+ H GV W++DSKATN+ +T L L+
Sbjct: 276 A-LAQAAGINLTGIRTALREFGGLDHRFQVAHI-ADGVRWINDSKATNVGSTIAALTGLQ 333
Query: 292 -GHKCVILLGGQAK 304
K +LLGG K
Sbjct: 334 VAGKLHLLLGGDGK 347
>gi|254230420|ref|ZP_04923800.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio sp. Ex25]
gi|262395261|ref|YP_003287115.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio sp. Ex25]
gi|151937053|gb|EDN55931.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio sp. Ex25]
gi|262338855|gb|ACY52650.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio sp. Ex25]
Length = 437
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/327 (27%), Positives = 152/327 (46%), Gaps = 61/327 (18%)
Query: 18 LACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGN 77
+ +L G V+ +++ A + + ++A+TG+NGKSTV G M+ G++ VGGN
Sbjct: 85 IQAVLAKGTTVVGDIELFAWAVQK--PVIAITGSNGKSTVTDLTGVMVKAAGLDVGVGGN 142
Query: 78 LGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK 137
+G P AL + + V+E+SS+Q+E + + LNL+ DH++R++
Sbjct: 143 IGVP---------ALDLLEQDADLYVLELSSFQLETTSSLKL-KAAAFLNLSEDHMDRYQ 192
Query: 138 TMKNYALTKCHLFSHMV-------------NTKLGLLPFG--NQHLNEAIKGHRFNLAWI 182
M +Y K +F H + ++ L+ FG NQ + G+R W+
Sbjct: 193 GMSDYRQAKLRIFDHAALAVVNRDDQETFPDAEMPLVTFGSDNQDFGLEVDGNR---TWL 249
Query: 183 GAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAV--AALSVLGLDIGV 240
+D + + + +K++G+HN NA V A L G+D
Sbjct: 250 -------LDHGQRVVASD-------------ELKLVGKHNLSNALVVLALLKAAGVDYHN 289
Query: 241 DVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGH-KCVILL 299
+ AL + + HR Q+V D QGV WV+DSKATN+ +T L L+ K +L+
Sbjct: 290 ALNALKNYTGL----THRCQVV-ADNQGVKWVNDSKATNIASTMAALSGLESTGKLYLLV 344
Query: 300 GGQAKVLNGQESNGFEKLIEPLNHHRC 326
GG K G + + + + LN C
Sbjct: 345 GGVGK---GADFSPLKPIFATLNLQLC 368
>gi|113971900|ref|YP_735693.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Shewanella
sp. MR-4]
gi|113886584|gb|ABI40636.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Shewanella sp.
MR-4]
Length = 439
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 149/314 (47%), Gaps = 37/314 (11%)
Query: 22 LQSGKRVMSELD-FAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
L G V+ +++ FA ++ R ++ +TG+NGKSTV T VG+ML G+ VGGN+G
Sbjct: 87 LDMGIEVIGDVELFAREIADRKPCVIGITGSNGKSTVTTLVGEMLREAGMAVAVGGNIGI 146
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMK 140
P AL + V+E+SS+Q+E + C S LN+T DH++R+ M
Sbjct: 147 P---------ALDLLTENADIFVLELSSFQLETTHSLNC-VASTCLNVTEDHMDRYSDMD 196
Query: 141 NYALTKCHLF---SHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTA 197
Y K L+ ++ + L + +N+ + F LA D++
Sbjct: 197 AYRKAKLRLYHQSRSIIFNRDDALTIPTEPMNQ----NSFGLAPPEGDEWGICDSKIYHG 252
Query: 198 SFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPH 257
E+ + + + ++G HN+ N +AA++++ +GVD + + H
Sbjct: 253 HSEI--------MPITEVSLIGSHNHAN-LLAAMALV-YAVGVDKQVMAKVARTFTGLSH 302
Query: 258 RMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGH--KCVILLGGQAKVLNGQESNGFE 315
R ++V GVT+V+DSKATN+ AT L L H +++ GG K + F
Sbjct: 303 RCEVVGVK-AGVTYVNDSKATNVGATVAALDGLSDHLGDIILIAGGDGKGAD------FS 355
Query: 316 KLIEPLNHHRCVIT 329
L+EPL +IT
Sbjct: 356 PLVEPLTKVTHLIT 369
>gi|375131958|ref|YP_004994058.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio furnissii
NCTC 11218]
gi|315181132|gb|ADT88046.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio furnissii
NCTC 11218]
Length = 439
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 138/292 (47%), Gaps = 41/292 (14%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
++A+TG+NGKSTV G M N GI VGGN+G P A +A P+ ++ V+
Sbjct: 110 VIAITGSNGKSTVTDLTGVMANAAGIATAVGGNIGVP----ALDLLAQPA-----ELYVL 160
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSH----MVNTKLGL 160
E+SS+Q+E + T + LNL+ DH++R+ M Y K +F H +VN
Sbjct: 161 ELSSFQLETTSS-LAVTAAAFLNLSEDHMDRYDGMTGYRQAKLRIFEHAQTAVVNAD--- 216
Query: 161 LPFGNQHLNEAIKGH--RFNLAWIGAFPGVKID-TEAKTASFEVPAVGVVSQLQLHNMKV 217
Q +A G RF L F + D E A+ EV L ++ +
Sbjct: 217 ---DTQTYPDAYSGRTVRFGLEQSAEFTTAQHDGKEVLLANGEV-------VLPTSDLSL 266
Query: 218 MGRHNYHN--AAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDS 275
+GRHN N +A L G++ + AL S + HR Q+V D QG+ WV+DS
Sbjct: 267 VGRHNVANVLTVLALLDAAGVNYTNTLPALKSYTGLT----HRCQVV-ADNQGIKWVNDS 321
Query: 276 KATNLEATCTGLMDLKGHKCVILL-GGQAKVLNGQESNGFEKLIEPLNHHRC 326
KATN+ +T L L + + LL GG K G + + ++E L C
Sbjct: 322 KATNVASTLAALSGLTLNGTLYLLVGGVGK---GADFTPLKPVLETLPLTLC 370
>gi|303228392|ref|ZP_07315225.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Veillonella
atypica ACS-134-V-Col7a]
gi|401679996|ref|ZP_10811920.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Veillonella sp.
ACP1]
gi|302516894|gb|EFL58803.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Veillonella
atypica ACS-134-V-Col7a]
gi|400219123|gb|EJO49994.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Veillonella sp.
ACP1]
Length = 454
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/282 (34%), Positives = 139/282 (49%), Gaps = 21/282 (7%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V+SE++ A V I L VTGTNGK+T T + Q++ G+ VGGN+G+ LSEAA+
Sbjct: 95 VVSEVELAYDVCKSPI--LGVTGTNGKTTTTTLLTQVMESTGLPVKVGGNIGDSLSEAAY 152
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
H P+ V E+SSYQ+E K FCP ++VLN+TPDHL RHKTM+NYA K
Sbjct: 153 HM-------PEGGYLVAELSSYQLETI-KSFCPLGAIVLNVTPDHLARHKTMENYAAAKA 204
Query: 148 HLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAF----PGVKIDTEAKTASFEVPA 203
+F + +L + + K + I G + A + A
Sbjct: 205 RIFMNQNPENFVVLNDDDPIVRAMKKDAHSKVLSISQHHKVDSGAYFEGNTCYAVLDGKA 264
Query: 204 VGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVH 263
V+ +H + G HN N + A+ L +GV+VE + IE HR++ V
Sbjct: 265 TPVIDTEHIH---IKGSHNIEN--ILAVIALTYALGVEVEHIKHIIEQFHGVEHRLERV- 318
Query: 264 RDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKV 305
VT+ +DSKATN ++ L D ++L GG K+
Sbjct: 319 TTFHDVTFYNDSKATNTDSVVKAL-DAFDKPVILLAGGHDKM 359
>gi|220933947|ref|YP_002512846.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Thioalkalivibrio
sulfidophilus HL-EbGr7]
gi|219995257|gb|ACL71859.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Thioalkalivibrio
sulfidophilus HL-EbGr7]
Length = 442
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 130/265 (49%), Gaps = 27/265 (10%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
++A+TG+NGKSTV VG+M G+ VGGN G P A + + ++ V+
Sbjct: 108 VVAITGSNGKSTVTALVGEMARAAGLNVAVGGNFGIP----ALDLL----NDADVELYVL 159
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFG 164
E+SS+Q+E + P + VLN++ DHL+R++++++YA K +F T+ ++
Sbjct: 160 ELSSFQLET-TESLAPVAATVLNISADHLDRYESLEDYAAAKERIFRR---TETAVINRD 215
Query: 165 NQHLNEAIKGHR-----FNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMG 219
+ + G R ++ G + V+ D E A E+P +++ G
Sbjct: 216 DPRVWSMAGGARRVSFGLDVPGEGDWGLVERDAEPWLAQGEIP------WFAESRLRIAG 269
Query: 220 RHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATN 279
RHN NA A G+ EA+ + PHR Q V R + GV+W +DSK TN
Sbjct: 270 RHNTANALAALALG--QAAGLPGEAMVEALTQFSGLPHRCQWVTR-LHGVSWYNDSKGTN 326
Query: 280 LEATCTGLMDLKGHKCVILLGGQAK 304
L AT L G + V++ GGQ K
Sbjct: 327 LGATLAALEGFPG-QVVLIAGGQGK 350
>gi|322389010|ref|ZP_08062580.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Streptococcus
parasanguinis ATCC 903]
gi|321144315|gb|EFX39723.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Streptococcus
parasanguinis ATCC 903]
Length = 449
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 150/301 (49%), Gaps = 31/301 (10%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L+ G V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LEKGIPVLTEVELAYLI--SDAPIIGITGSNGKTTTTTMIGEVLTAAGQGGLLSGNIGFP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A + + V V+E+SS+Q+ + + F P ++V+ NL P H++ H + +N
Sbjct: 151 ASQVA-------QTATEKDVLVMELSSFQL-MGIEAFHPEIAVITNLMPTHIDYHGSFEN 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAI----KGHRFNLAWIGAFPGVKIDTEAKTA 197
Y K +L +M + +L F NQ L + + K + I G + E
Sbjct: 203 YVAAKWNLQKNMTEKDVIVLNF-NQDLAKELATKTKARVLPFSTIEKVDGAYL--EDGLL 259
Query: 198 SFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPH 257
F+ AV ++ + V G HN N A+A ++V + GV+ E + T+ H
Sbjct: 260 KFKGEAV-----MRADELGVPGSHNVEN-ALATIAVAKVR-GVENEVIKETLSAFGGVKH 312
Query: 258 RMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKL 317
R+Q V +IQGV + +DSK+TN+ AT L K +++ GG + N F++L
Sbjct: 313 RLQYVD-EIQGVKFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------GNEFDEL 365
Query: 318 I 318
+
Sbjct: 366 V 366
>gi|395492283|ref|ZP_10423862.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Sphingomonas sp.
PAMC 26617]
Length = 355
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 131/283 (46%), Gaps = 42/283 (14%)
Query: 28 VMSELDFAAQV---IPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSE 84
++ +++ AQ +PR K++ +TGTNGKST V +L I + +GGN+G P+ E
Sbjct: 19 ILGDIELFAQARSDLPRH-KVVGITGTNGKSTTTALVHHILQTAKIPSLMGGNIGLPILE 77
Query: 85 AAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYAL 144
P+ V V+E+SSYQ+++ C V+V+LN+TPDHL+R+ YA
Sbjct: 78 Q--------QPLPEGGVYVLELSSYQIDLTQSLDC-DVAVLLNVTPDHLDRYDGFDAYAA 128
Query: 145 TKCHLFSHMVNTKLGLLPFGNQH---LNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEV 201
+K LF ++ G+ + ++ L I PGV +D
Sbjct: 129 SKARLFEMQSPGHAAIIGIGDTPSALIARSLSARGEQLTKIA--PGVCMD---------- 176
Query: 202 PAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQI 261
Q + G HN NA A L GV A++ + PHRM+
Sbjct: 177 ---------QSRWPSLQGPHNAQNALAAIAVAQAL--GVSEAAIDEGLRSFTGLPHRMER 225
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
V R GV WV+DSKATN E+T L + +LGG+AK
Sbjct: 226 V-RTHNGVAWVNDSKATNPESTAPALAAFD--RIHWILGGEAK 265
>gi|357031775|ref|ZP_09093718.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Gluconobacter
morbifer G707]
gi|356415005|gb|EHH68649.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Gluconobacter
morbifer G707]
Length = 448
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 135/284 (47%), Gaps = 47/284 (16%)
Query: 44 KILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAV 103
+ ++VTGTNGKST + +L+ G+ GGNLG +ALP P V V
Sbjct: 113 RFVSVTGTNGKSTTTALIAHLLDVAGLACAAGGNLGTA-------SLALPL-LPDQGVYV 164
Query: 104 VEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPF 163
+E+SSY +E ++Y + + +LNLTPDHL+RH M+ YA K H+F +M L ++
Sbjct: 165 LEMSSYMLERLDRYHA-SAACLLNLTPDHLDRHGDMEGYAAAKAHVFDNMTGDDLAVIGQ 223
Query: 164 GN---QHLNEAIKGHRFNLAWIGAFPGVKIDTEAKT-ASFEVPAVGVVSQLQLHNMKVMG 219
+ + + E++ +A + EA + ++ PA + G
Sbjct: 224 DDVWCRRIAESVAARGIPVASL----------EADSLPPYDAPA-------------LPG 260
Query: 220 RHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATN 279
RHN N A A V L I D+ + + ++ HR+Q V + +G+++V+DSKATN
Sbjct: 261 RHNVQNIAAAWKIVRHLGISDDM--VRAGLKTFGGLEHRLQKVAK-CEGISFVNDSKATN 317
Query: 280 LEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPLNH 323
EA L + + + GG AK + G E L H
Sbjct: 318 AEAASKALEAYD--RVMWIAGGMAK------AGGIESLAPWFGH 353
>gi|418287634|ref|ZP_12900207.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis NM233]
gi|372203529|gb|EHP17182.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis NM233]
Length = 445
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 143/287 (49%), Gaps = 26/287 (9%)
Query: 23 QSGKRVMSELDFAAQVI-PRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
Q+G RV+ +++ A ++ R K++A+TG+NGK+TV + VG + G++ + GN+G P
Sbjct: 89 QNGGRVLGDIELLADIVNRRGDKVIAITGSNGKTTVTSLVGYLCIKCGLDTVIAGNIGTP 148
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
+ EA + K V V+E+SS+Q+E + PT + VLN++ DHL+R+ + +
Sbjct: 149 VLEAEWQ-----REGKKADVWVLELSSFQLE-NTESLSPTAATVLNISEDHLDRYDDLLD 202
Query: 142 YALTKCHLFS----HMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTA 197
YA TK +F ++N + A+K + W E +T
Sbjct: 203 YAHTKAKIFRGDGVQVLNA--------DDAFCRAMKRAGREVKWFSLEHEADFWLERETG 254
Query: 198 SFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPH 257
+ G + ++ + G H + A V A L +G+ EAL ++ + PH
Sbjct: 255 RLK---QGNEDLIATKDIPLQGLH--NAANVMAAVALCEAVGLPREALLEHVKTFQGLPH 309
Query: 258 RMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
R++ + + GV ++DDSK TN+ AT + L+ + ++LGG K
Sbjct: 310 RVEKIGKK-NGVVFIDDSKGTNVGATAAAIAGLQ-NPLFVILGGMGK 354
>gi|94987544|ref|YP_595477.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Lawsonia
intracellularis PHE/MN1-00]
gi|442556398|ref|YP_007366223.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Lawsonia
intracellularis N343]
gi|122063249|sp|Q1MPC1.1|MURD_LAWIP RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|94731793|emb|CAJ55156.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Lawsonia
intracellularis PHE/MN1-00]
gi|441493845|gb|AGC50539.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Lawsonia
intracellularis N343]
Length = 440
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 134/281 (47%), Gaps = 44/281 (15%)
Query: 27 RVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAA 86
+V+SE + A + K++A+TGTNGK+T+ + ML GI FVGGN+G PLSE
Sbjct: 106 QVLSETELAWYQLSNE-KVIAITGTNGKTTIASLCAAMLVEQGISVFVGGNIGTPLSEYV 164
Query: 87 FHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTK 146
K K V V+E+SS+Q++ + F P +++ N++ +HL+ H+ M Y K
Sbjct: 165 L-------CKKKVSVVVLELSSFQLQTCS-LFRPDIAICSNISINHLDYHRNMDEYISAK 216
Query: 147 CHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGV 206
++ + + L +L PG+ EA S+ + A V
Sbjct: 217 LNICKNQCESDLAILK-----------------------PGM----EALVDSYNLKA-RV 248
Query: 207 VSQLQLHNM---KVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVH 263
V L N +++G HN NA A L+ ++GV E + HR++ V
Sbjct: 249 VFYRDLGNFSTSRLLGVHNLENAEAAWLAC--KELGVTEEIAKKVVTTFEPLEHRLEQV- 305
Query: 264 RDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
R + GV +V+DSK T +EA L K ++L GG+ K
Sbjct: 306 RLLNGVLYVNDSKGTTVEALRAALESFK-QPILLLAGGRFK 345
>gi|385850666|ref|YP_005897181.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis M04-240196]
gi|325205489|gb|ADZ00942.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis M04-240196]
Length = 445
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 143/289 (49%), Gaps = 30/289 (10%)
Query: 23 QSGKRVMSELDFAAQVI-PRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
Q+G RV+ +++ A ++ R K++A+TG+NGK+TV + VG + G++ + GN+G P
Sbjct: 89 QNGGRVLGDIELLADIVNRRDDKVIAITGSNGKTTVTSLVGYLCIKCGLDTVIAGNIGTP 148
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
+ EA + K V V+E+SS+Q+E + PT + VLN++ DHL+R+ + +
Sbjct: 149 VLEAEWQ-----REGKKADVWVLELSSFQLE-NTESLRPTAATVLNISEDHLDRYDDLLD 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLN------EAIKGHRFNLAWIGAFPGVKIDTEAK 195
YA TK +F G Q LN A+K + W E +
Sbjct: 203 YAHTKAKIFRGD----------GVQVLNSDDVFCRAMKRAGREVKWFSLEHEADFWLERE 252
Query: 196 TASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTP 255
T + G + ++ + G H + A V A L IG+ EAL ++ +
Sbjct: 253 TGRLK---QGNEDLIATQDIPLQGLH--NAANVMAAVALCEAIGLSREALLEHVKTFQGL 307
Query: 256 PHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
PHR++ + + GV ++DDSK TN+ AT + L+ + ++LGG K
Sbjct: 308 PHRVEKIG-EKNGVVFIDDSKGTNVGATAAAIAGLQ-NPLFVILGGMGK 354
>gi|256821912|ref|YP_003145875.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Kangiella
koreensis DSM 16069]
gi|256795451|gb|ACV26107.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Kangiella koreensis
DSM 16069]
Length = 444
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/295 (30%), Positives = 145/295 (49%), Gaps = 40/295 (13%)
Query: 23 QSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPL 82
+SG V+ +++ AQ ++ ++A+TG+NGKSTV VG+++N G +A VGGN+G P
Sbjct: 89 ESGVSVIGDIELFAQA--NTLPVIAITGSNGKSTVTDLVGELINASGKKALVGGNIGVP- 145
Query: 83 SEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNY 142
AL K + +E+SS+Q+E + P + VLN++ DHL+R+K + Y
Sbjct: 146 --------ALDLLKLEGDYVALELSSFQLE-STRSLEPVAATVLNVSEDHLDRYKNYQEY 196
Query: 143 ALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGH---RFNLAWIGAFPGVKIDTEAKTASF 199
K +++ T L N + A G RF L+ +D E T
Sbjct: 197 IDAKRSIYAK-ARTCLVNADDENTWIKSAESGQNILRFGLSNNSDKIDWAVDFETCTIMH 255
Query: 200 EVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTP---- 255
+ + L+L + + G HN N AVA L L VD+ + T +L
Sbjct: 256 DGNEI-----LKLDELTLQGIHNALNVAVA----LAL---VDIAEIELTQAVLDAAKSYQ 303
Query: 256 --PHRMQIVH-RDIQGVTWVDDSKATNLEATCTGLMDLK---GHKCVILLGGQAK 304
PHR Q+V +D G+T+++DSKATN+ AT + + G +++ GG AK
Sbjct: 304 GLPHRSQLVAIKD--GITFINDSKATNVGATVAAIHSFEPQFGKNIILIAGGDAK 356
>gi|260424625|ref|ZP_05732710.2| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Dialister
invisus DSM 15470]
gi|260402591|gb|EEW96138.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Dialister
invisus DSM 15470]
Length = 456
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 97/292 (33%), Positives = 151/292 (51%), Gaps = 25/292 (8%)
Query: 21 LLQSGKR---VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGN 77
++++ KR V+SE++ A +V I LAVTGTNGK+T T +G M+ H I V GN
Sbjct: 89 VMEAFKRRIPVISEIELAYRVTKAPI--LAVTGTNGKTTTTTLLGSMIGHSSIPFAVAGN 146
Query: 78 LGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK 137
LG LS A +A V EVSS+Q+E K FCP +V+LN+TPDH+ERH
Sbjct: 147 LGISLSREA-ELVAEDG------VIAAEVSSFQLEFI-KDFCPKAAVILNITPDHIERHH 198
Query: 138 TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKT- 196
TM+ Y K +F +M LL +++ +K + + + + D E
Sbjct: 199 TMERYVAAKARIFENMGKDNCLLLNAEDEYTPILMKKAKNTTVCLFS---ISRDVEEGAC 255
Query: 197 ---ASFEVPAVGVVSQLQ-LHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEIL 252
A + G V ++ + +++ G NY N AA L + G+ +EA++ I
Sbjct: 256 LNGADLVIKRRGKVLKVAGIDELQLTGNQNYQNVLAAAF--LAYEGGIPLEAIHDGIIEF 313
Query: 253 RTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
+ PHR++ V R++ GV++ +DSKATN +A G M+ +++ GG K
Sbjct: 314 KGLPHRIEFV-RELDGVSYYNDSKATNTDAAIKG-METFNRPIILIAGGYDK 363
>gi|427408252|ref|ZP_18898454.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Sphingobium
yanoikuyae ATCC 51230]
gi|425713591|gb|EKU76604.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Sphingobium
yanoikuyae ATCC 51230]
Length = 437
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 127/274 (46%), Gaps = 37/274 (13%)
Query: 44 KILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQ--- 100
K++ +TGTNGKST + ++ G A +GGN+G P+ + +P
Sbjct: 110 KVVGITGTNGKSTTTALIHHIIEQAGFPARMGGNIGLPI-------LGQEPLEPNLHGMG 162
Query: 101 VAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGL 160
V V+E+SSYQ+++ + C V+V+LN+TPDHL+R+ Y +K LF+ + +
Sbjct: 163 VYVLELSSYQIDLTHSLDC-DVAVLLNITPDHLDRYNGFAGYVASKARLFAMQSADHVAV 221
Query: 161 LPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGR 220
+ ++ P I A EV A + QL + G
Sbjct: 222 IATEDE-------------------PSRGIAASAPAQLREVKAADIDPDAQLGWPSLQGP 262
Query: 221 HNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNL 280
HN NAAVA +G +G+D + + + + PHRMQ V GV +V+DSKATN
Sbjct: 263 HNAQNAAVAI--AVGRALGIDDATIMAALASYASLPHRMQAVGTH-NGVLYVNDSKATNA 319
Query: 281 EATCT--GLMDLKGHKCVI--LLGGQAKVLNGQE 310
+T G + K I +LGG AK N E
Sbjct: 320 ASTAPALGAWPARDGKPRIHWILGGVAKSDNLDE 353
>gi|417926599|ref|ZP_12569996.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Finegoldia
magna SY403409CC001050417]
gi|341588967|gb|EGS32337.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Finegoldia
magna SY403409CC001050417]
Length = 441
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 143/278 (51%), Gaps = 13/278 (4%)
Query: 27 RVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAA 86
V+S+L+ A Q I IKI+A+TGTNGK+T + + +MLN G +A GN+G +
Sbjct: 83 EVVSDLELA-QRIFGDIKIVAITGTNGKTTTTSLMTKMLNDSGRKAISIGNIGVGMLWEI 141
Query: 87 FHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTK 146
++ S K F V+E SS+Q+E K+F P S ++N+TPDH++ H +M+NY K
Sbjct: 142 YN-----SDKDTF--FVIECSSFQLE-STKHFKPQYSCIINITPDHIDWHGSMQNYVNAK 193
Query: 147 CHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGV 206
++ + +L +++ E K + N+ I VK + K S
Sbjct: 194 KNVLKNQDENCYTVLNANDEYYEECKKFTKANVYDISTSKNVKRGSFIKDNSIYFSDSDC 253
Query: 207 VSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDI 266
+ L ++K++G HNY N L IG++ +++ T+ HR++ V RD+
Sbjct: 254 DKIIDLKDVKLIGYHNYQNVLFCV--TLAKLIGINDDSIRETLMSFSGVEHRLEFV-RDL 310
Query: 267 QGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
GV + +DSK TN++A+ + + +IL GG K
Sbjct: 311 SGVKYYNDSKGTNVDASVKAIESFDKN-VIILAGGYDK 347
>gi|357236480|ref|ZP_09123823.1| putative UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
[Streptococcus criceti HS-6]
gi|356884462|gb|EHI74662.1| putative UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
[Streptococcus criceti HS-6]
Length = 451
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 147/320 (45%), Gaps = 61/320 (19%)
Query: 18 LACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGN 77
+A L+ G V +E++ A ++ I+ +TG+NGK+T T + +LN G A + GN
Sbjct: 89 VAKALRKGIPVYTEVELAYRI--SESPIIGITGSNGKTTTTTMIANVLNAAGQSALLSGN 146
Query: 78 LGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK 137
+G P SE A I V+E+SS+Q+ + + F P ++V+ NL P H++ H
Sbjct: 147 IGFPASEVAMTAI-------DKDTLVMELSSFQL-MGVETFHPHMAVITNLMPTHIDYHG 198
Query: 138 TMKNYALTKCHLFSHMV-------------------NTKLGLLPFGNQHLNEAIKGHRFN 178
T ++Y K HL M T+ +LPF Q E + G
Sbjct: 199 TFEDYVAAKWHLQGQMTADDYLILNFNQDLAKELASKTQATVLPFSTQ---EEVDGAYLK 255
Query: 179 LAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDI 238
++ F G ++ + + V G HN NA +AA++V L
Sbjct: 256 DGYL-CFKGEQV-------------------MAADTIGVPGSHNIENA-LAAIAVAKLS- 293
Query: 239 GVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVIL 298
GVD + T+ HR+Q + + ++GV++ +DSK+TN+ AT L +K +++
Sbjct: 294 GVDNAVIAQTLSSFSGVKHRLQFLGQ-VKGVSFYNDSKSTNILATQKALSGFDNNKVILI 352
Query: 299 LGGQAKVLNGQESNGFEKLI 318
GG + N F++LI
Sbjct: 353 AGGLDR------GNEFDELI 366
>gi|416181866|ref|ZP_11611807.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis M13399]
gi|416212080|ref|ZP_11621685.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis M01-240013]
gi|325134887|gb|EGC57520.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis M13399]
gi|325144959|gb|EGC67242.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis M01-240013]
Length = 445
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 143/289 (49%), Gaps = 30/289 (10%)
Query: 23 QSGKRVMSELDFAAQVI-PRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
Q+G RV+ +++ A ++ R K++A+TG+NGK+TV + VG + G++ + GN+G P
Sbjct: 89 QNGGRVLGDIELLADIVNRRGDKVIAITGSNGKTTVTSLVGYLCIKCGLDTVIAGNIGTP 148
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
+ EA + K V V+E+SS+Q+E + PT + VLN++ DHL+R+ + +
Sbjct: 149 VLEAEWQ-----REGKKADVWVLELSSFQLE-NTESLRPTAATVLNISEDHLDRYDDLLD 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLN------EAIKGHRFNLAWIGAFPGVKIDTEAK 195
YA TK +F G Q LN A+K + W E +
Sbjct: 203 YAHTKAKIFRGD----------GVQVLNSDDVFCRAMKRAGREVKWFSLEHEADFWLERE 252
Query: 196 TASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTP 255
T + G + ++ + G H + A V A L IG+ EAL ++ +
Sbjct: 253 TGRLK---QGNEDLIATQDIPLQGLH--NAANVMAAVALCEAIGLSREALLEHVKTFQGL 307
Query: 256 PHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
PHR++ + + GV ++DDSK TN+ AT + L+ + ++LGG K
Sbjct: 308 PHRVEKIG-EKNGVVFIDDSKGTNVGATAAAIAGLQ-NPLFVILGGMGK 354
>gi|404487173|ref|ZP_11022360.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Barnesiella
intestinihominis YIT 11860]
gi|404335669|gb|EJZ62138.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Barnesiella
intestinihominis YIT 11860]
Length = 447
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 155/312 (49%), Gaps = 29/312 (9%)
Query: 14 KATGLACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAF 73
+A +A L + ++SE++FA + +++ +TG+NGK+T +L G++
Sbjct: 78 RAPMIAALREKNIPIISEIEFAGRYT--RARMICITGSNGKTTTTLLTYHILKSAGLKVG 135
Query: 74 VGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDH 132
+ GN+G L+ C + V+E+SS+Q++ N Y F ++++LN+TPDH
Sbjct: 136 LAGNVGKSLALQVATC--------DYDYYVIELSSFQLD--NMYDFKAHIAILLNITPDH 185
Query: 133 LERHK-TMKNYALTKCHLFSHMVNTKLGLL----PFGNQHLNE-AIKGHRFNLAWIGAFP 186
L+R+ M+NY K + + + P + L++ +K R+ A P
Sbjct: 186 LDRYDYKMENYVDAKFRIIRNQTEDDAFIYWNDDPVITEKLSQLPLKSQRYPFAETHE-P 244
Query: 187 GVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALN 246
G + TE + + P + ++ + + GRHN +N+ A LS L+ V E +
Sbjct: 245 GTQAYTEDGALTIDTPEEKLT--METDELSLHGRHNLYNSMAAGLSACLLN--VKKEYVR 300
Query: 247 STIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVL 306
+ + HR++ V ++GV +++DSKATN+ + L +K V++LGG+ K
Sbjct: 301 KALSDFESVEHRLERVAS-VRGVQFINDSKATNVNSCWYALESMKT-PVVLILGGKDK-- 356
Query: 307 NGQESNGFEKLI 318
G + + E+L+
Sbjct: 357 -GNDYSEIEQLV 367
>gi|319639041|ref|ZP_07993799.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Neisseria mucosa
C102]
gi|317399945|gb|EFV80608.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Neisseria mucosa
C102]
Length = 445
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 144/287 (50%), Gaps = 26/287 (9%)
Query: 23 QSGKRVMSELDFAAQVI-PRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
Q+G RV+ +++ A V+ R K++A+TG+NGK+TV + VG + G++ + GN+G P
Sbjct: 89 QNGGRVLGDIELLADVVNRRGDKVIAITGSNGKTTVTSLVGYLCIKCGLDTVIAGNIGTP 148
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
+ EA L K V V+E+SS+Q+E + PT + VLN++ DHL+R+ + +
Sbjct: 149 VLEA-----ELQREGKKADVWVLELSSFQLE-NTESLRPTAATVLNISEDHLDRYDDLLD 202
Query: 142 YALTKCHLFS----HMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTA 197
YA TK +F ++N + A+K + W E +T
Sbjct: 203 YAHTKDKIFRGDGVQVLNA--------DDAFCRAMKRAGREVKWFSLEHEADFWLERETG 254
Query: 198 SFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPH 257
+ ++S ++ + G H + A V A L IG+ EAL ++ + PH
Sbjct: 255 RLKQGNEDLIST---QDIPLQGLH--NAANVMAAVALCEAIGLPREALLEHVKTFQGLPH 309
Query: 258 RMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
R++ + + GV ++DDSK TN+ AT + L+ + ++LGG K
Sbjct: 310 RVEKIG-EKNGVVFIDDSKGTNVGATAAAIAGLQ-NPLFVILGGMGK 354
>gi|418718421|ref|ZP_13277954.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Leptospira
borgpetersenii str. UI 09149]
gi|418737602|ref|ZP_13293999.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Leptospira
borgpetersenii serovar Castellonis str. 200801910]
gi|410744783|gb|EKQ93519.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Leptospira
borgpetersenii str. UI 09149]
gi|410746796|gb|EKQ99702.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Leptospira
borgpetersenii serovar Castellonis str. 200801910]
Length = 462
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 134/297 (45%), Gaps = 58/297 (19%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V SE+D KI+ +TGT+GKST + V +L + GGNLG P +
Sbjct: 89 VFSEIDLGRFFFKG--KIIGITGTDGKSTTTSLVAHLLKKDFSDLKEGGNLGIPFTSFCK 146
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
I+L AV+E+SSYQ+E + VSV LNL PDHLERH+TM+NY K
Sbjct: 147 EPISL---------AVLELSSYQLEDSSPLDL-NVSVFLNLAPDHLERHETMENYFRAKL 196
Query: 148 H-----------LFSHMVNTKL--------GLLPFGNQHLNEAIKGHRFNLAWIGAFPGV 188
+ S + K+ LL FG +EAI
Sbjct: 197 KIADLQNPNHSLIVSEKIREKILNSTSVRCKLLSFGRATTSEAILDES------------ 244
Query: 189 KIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNST 248
+E +T+ F + +S+ L G HN N A A L+ IG E++ +
Sbjct: 245 --SSEIRTSKF----IYDISRFYLP-----GTHNRENLAAAILASEA--IGGKPESIQAQ 291
Query: 249 IEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKG-HKCVILLGGQAK 304
I PHR QI +G+++++DSK+TNL + G+ K + ++LGG+ K
Sbjct: 292 IPFFMGLPHRFQIAGEK-RGISFINDSKSTNLHSMLAGMSTWKNLDRTCLILGGRPK 347
>gi|298369637|ref|ZP_06980954.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Neisseria sp.
oral taxon 014 str. F0314]
gi|298282194|gb|EFI23682.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Neisseria sp.
oral taxon 014 str. F0314]
Length = 445
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 143/289 (49%), Gaps = 30/289 (10%)
Query: 23 QSGKRVMSELDFAAQVI-PRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
Q+G RV+ +++ A ++ R K++A+TG+NGK+TV + VG + G++ + GN+G P
Sbjct: 89 QNGGRVLGDIELLADIVNRRGDKVIAITGSNGKTTVTSLVGYLCIKCGLDTVIAGNIGTP 148
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
+ EA L K V V+E+SS+Q+E + PT + VLN++ DHL+R+ + +
Sbjct: 149 VLEA-----ELQREGKKADVWVLELSSFQLE-NTESLRPTAATVLNISEDHLDRYDDLLD 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLN------EAIKGHRFNLAWIGAFPGVKIDTEAK 195
YA TK +F G Q LN A+K + W E +
Sbjct: 203 YAHTKAKIFRGD----------GVQVLNSDDVFCRAMKRAGREVKWFSLEQEADFWLERE 252
Query: 196 TASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTP 255
T + G + ++ + G H + A V A L +G+ EAL ++ +
Sbjct: 253 TGRLK---QGNEDLIATQDIPLQGLH--NAANVMAAVALCEAVGLPREALIEHVKTFQGL 307
Query: 256 PHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
PHR++ + + GV ++DDSK TN+ AT + L+ + ++LGG K
Sbjct: 308 PHRVEKIG-EKNGVVFIDDSKGTNVGATAAAIAGLQ-NPLFVILGGMGK 354
>gi|421093367|ref|ZP_15554091.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Leptospira
borgpetersenii str. 200801926]
gi|410363350|gb|EKP14379.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Leptospira
borgpetersenii str. 200801926]
gi|456888659|gb|EMF99617.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Leptospira
borgpetersenii str. 200701203]
Length = 462
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 136/297 (45%), Gaps = 58/297 (19%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V SE+D KI+ +TGT+GKST + V +L + GGNLG P +
Sbjct: 89 VFSEIDLGRFFFKG--KIIGITGTDGKSTTTSLVAHLLKKDFSDLKEGGNLGIPFTSFCK 146
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
I+L AV+E+SSYQ+E + VSV LNL PDHLERH+TM+NY K
Sbjct: 147 EPISL---------AVLELSSYQLEDSSPLDL-NVSVFLNLAPDHLERHETMENYFRAKL 196
Query: 148 HL-------FSHMVNTKL------------GLLPFGNQHLNEAIKGHRFNLAWIGAFPGV 188
+ S +V+ K+ LL FG +EAI
Sbjct: 197 KIADLQNPNHSLIVSEKIREKILNSTSVRCKLLSFGRATTSEAILDES------------ 244
Query: 189 KIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNST 248
+E +T+ F + +S+ L G HN N A A L+ IG E++ +
Sbjct: 245 --SSEIRTSKF----IYDISRFYLP-----GTHNRENLAAAILASEA--IGGKPESIQAQ 291
Query: 249 IEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKG-HKCVILLGGQAK 304
I PHR QI +G+++++DSK+TNL + G+ K + ++LGG+ K
Sbjct: 292 IPFFMGLPHRFQIAGEK-RGISFINDSKSTNLHSMLAGMSTWKNLDRTCLILGGRPK 347
>gi|421100598|ref|ZP_15561221.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Leptospira
borgpetersenii str. 200901122]
gi|410796401|gb|EKR98537.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Leptospira
borgpetersenii str. 200901122]
Length = 460
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 93/298 (31%), Positives = 139/298 (46%), Gaps = 60/298 (20%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V SE+D KI+ VTGT+GKST + + +L + GGNLG P +
Sbjct: 89 VFSEIDLGRFFFKG--KIIGVTGTDGKSTTTSLITHLLKKDFSDLKEGGNLGIPFTSFCK 146
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDHLERHKTMKNYALTK 146
I+L AV+E+SSYQ++ + Y VSV LNL PDHLERH+TM+NY K
Sbjct: 147 EPISL---------AVLELSSYQLD--DSYPLHLNVSVFLNLAPDHLERHQTMENYFRAK 195
Query: 147 CHL-------FSHMVNTKL------------GLLPFGNQHLNEAIKGHRFNLAWIGAFPG 187
+ S +V+ K+ LL FG +EA+
Sbjct: 196 LKIADLQNPNHSLIVSEKIREKILNSTSVRCKLLSFGRAATSEAVLDES----------- 244
Query: 188 VKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNS 247
+E +T+ F + +S+ L G HN N A A L+ IG + E++ +
Sbjct: 245 ---SSEIRTSKF----IYDISRFYLP-----GTHNRENLAAAILASEA--IGGEPESIQA 290
Query: 248 TIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKG-HKCVILLGGQAK 304
I + PHR QI QG+++++DSK+TNL + G+ K + ++LGG+ K
Sbjct: 291 RIPLFMGLPHRFQIAGEK-QGISFINDSKSTNLHSMLAGMSTWKNLDRTCLILGGRPK 347
>gi|15676332|ref|NP_273468.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Neisseria
meningitidis MC58]
gi|385852604|ref|YP_005899118.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis H44/76]
gi|416195328|ref|ZP_11617696.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis CU385]
gi|427827256|ref|ZP_18994297.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis H44/76]
gi|433464393|ref|ZP_20421885.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis NM422]
gi|433487601|ref|ZP_20444778.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis M13255]
gi|433489773|ref|ZP_20446910.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis NM418]
gi|433504238|ref|ZP_20461182.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis 9506]
gi|433506556|ref|ZP_20463473.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis 9757]
gi|433508562|ref|ZP_20465445.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis 12888]
gi|433510672|ref|ZP_20467513.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis 4119]
gi|30316129|sp|Q9K0Y4.1|MURD_NEIMB RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|7225643|gb|AAF40858.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis MC58]
gi|316984929|gb|EFV63885.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis H44/76]
gi|325140935|gb|EGC63442.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis CU385]
gi|325199608|gb|ADY95063.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis H44/76]
gi|389605076|emb|CCA44000.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Neisseria
meningitidis alpha522]
gi|432205627|gb|ELK61652.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis NM422]
gi|432225495|gb|ELK81237.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis M13255]
gi|432229767|gb|ELK85448.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis NM418]
gi|432243135|gb|ELK98649.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis 9506]
gi|432243880|gb|ELK99385.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis 9757]
gi|432249445|gb|ELL04852.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis 12888]
gi|432249886|gb|ELL05285.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis 4119]
Length = 445
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 143/287 (49%), Gaps = 26/287 (9%)
Query: 23 QSGKRVMSELDFAAQVI-PRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
Q+G RV+ +++ A ++ R K++A+TG+NGK+TV + VG + G++ + GN+G P
Sbjct: 89 QNGGRVLGDIELLADIVNRRDDKVIAITGSNGKTTVTSLVGYLCIKCGLDTVIAGNIGTP 148
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
+ EA + K V V+E+SS+Q+E + PT + VLN++ DHL+R+ + +
Sbjct: 149 VLEAEWQ-----REGKKADVWVLELSSFQLE-NTESLRPTAATVLNISEDHLDRYDDLLD 202
Query: 142 YALTKCHLFS----HMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTA 197
YA TK +F ++N + A+K + W E +T
Sbjct: 203 YAHTKAKIFRGDGVQVLNA--------DDAFCRAMKRAGREVKWFSLEHEADFWLERETG 254
Query: 198 SFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPH 257
+ G + ++ + G H + A V A L IG+ EAL ++ + PH
Sbjct: 255 RLK---QGNEDLIVTQDIPLQGLH--NAANVMAAVALCEAIGLSREALLEHVKTFQGLPH 309
Query: 258 RMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
R++ + + GV ++DDSK TN+ AT + L+ + ++LGG K
Sbjct: 310 RVEKIG-EKNGVVFIDDSKGTNVGATAAAIAGLQ-NPLFVILGGMGK 354
>gi|148240320|ref|YP_001225707.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Synechococcus
sp. WH 7803]
gi|147848859|emb|CAK24410.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Synechococcus sp.
WH 7803]
Length = 463
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 136/298 (45%), Gaps = 29/298 (9%)
Query: 18 LACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGN 77
L L G RV E+ A + I + +TGTNGK+TV + +L H G+EA + GN
Sbjct: 86 LNALRAQGLRVRGEMSVAWDAL-SGIPWIGITGTNGKTTVTHLLQHVLAHAGLEAPMAGN 144
Query: 78 LGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK 137
+G+ +E A L ++PK V+E+SSYQ+E + P + + LTPDHLERH
Sbjct: 145 VGHSAAELALEV--LQGTRPKPDWVVMEMSSYQIEAAGE-VSPRIGIWTTLTPDHLERHG 201
Query: 138 TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGH-----RFNLAWI-GAFPGVKID 191
T+ Y K L L + I+ H R L W+ GA G D
Sbjct: 202 TLAAYRAIKRGLLERAETPVL-------NADDADIRQHCGAWSRPGLRWVSGADDGPDKD 254
Query: 192 TEAKTASFEVPAVGVVSQ-----LQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALN 246
+ + V A G VSQ + + G HN N + + L+ V ++
Sbjct: 255 SIHR---ISVNAQGWVSQGERPLFPADALPLPGDHNRQN--MLLATAAALEASVSASSIE 309
Query: 247 STIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
+ + PHR++ + + G+ +DSKATN +A GL ++ V+L GGQ K
Sbjct: 310 AALRCFTGVPHRLEPLG-SVGGIPVFNDSKATNYDAAAVGLRSVQA-PVVLLAGGQTK 365
>gi|114330275|ref|YP_746497.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Nitrosomonas
eutropha C91]
gi|122314675|sp|Q0AJD9.1|MURD_NITEC RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|114307289|gb|ABI58532.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Nitrosomonas
eutropha C91]
Length = 470
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 94/309 (30%), Positives = 153/309 (49%), Gaps = 21/309 (6%)
Query: 22 LQSGKRVMSELDFAA----QVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGN 77
LQ G V+ +++ A Q P KILA+TG+NGK+TV T VG+M + G + V GN
Sbjct: 88 LQQGVSVIGDIELFAIALDQHAPPGTKILAITGSNGKTTVATMVGEMARNTGWDVEVAGN 147
Query: 78 LGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK 137
+G +A I + + V+E+SS+Q+E + P +VVLNL+ DHL+R++
Sbjct: 148 IGLAALDALMQRI---DTGKWPHLWVLELSSFQLETTSS-LRPNAAVVLNLSEDHLDRYR 203
Query: 138 TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTA 197
++ YA K +F N+ + +L + + + L + + P + +
Sbjct: 204 IIEEYAAAKARIFPDPHNSCVQVLNREDARVYAMAHENSKQLTFGLSAPAFDDEFGVLPS 263
Query: 198 SFEV-PAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPP 256
++ A G +++ + V G HN NA A +D+ E L + I + P
Sbjct: 264 GSDLWLAQGTTRLMKVSELAVAGLHNAANALAALALCRAIDL--PFEPLLHALHIFKGLP 321
Query: 257 HRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILL-GGQAKVLNGQESNGFE 315
HRMQ + + GVT+ DDSK+TN+ + L + K VIL+ GG K GQ+ F
Sbjct: 322 HRMQKI-AEFNGVTFYDDSKSTNVGSAVAALNGFR--KNVILIAGGDGK---GQD---FS 372
Query: 316 KLIEPLNHH 324
L +P++ H
Sbjct: 373 PLEQPVSKH 381
>gi|116328899|ref|YP_798619.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Leptospira
borgpetersenii serovar Hardjo-bovis str. L550]
gi|116330494|ref|YP_800212.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Leptospira
borgpetersenii serovar Hardjo-bovis str. JB197]
gi|122281748|sp|Q04UG6.1|MURD_LEPBJ RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|122283318|sp|Q04Z09.1|MURD_LEPBL RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|116121643|gb|ABJ79686.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Leptospira
borgpetersenii serovar Hardjo-bovis str. L550]
gi|116124183|gb|ABJ75454.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Leptospira
borgpetersenii serovar Hardjo-bovis str. JB197]
Length = 462
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 136/297 (45%), Gaps = 58/297 (19%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V SE+D KI+ +TGT+GKST + V +L + GGNLG P +
Sbjct: 89 VFSEIDLGRFFFKG--KIIGITGTDGKSTTTSLVAHLLKKDFSDLKEGGNLGIPFTSFCK 146
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
I+L AV+E+SSYQ+E + VSV LNL PDHLERH+TM+NY K
Sbjct: 147 EPISL---------AVLELSSYQLEDSSPLDL-NVSVFLNLAPDHLERHETMENYFRAKL 196
Query: 148 HL-------FSHMVNTKL------------GLLPFGNQHLNEAIKGHRFNLAWIGAFPGV 188
+ S +V+ K+ LL FG +EAI
Sbjct: 197 KIADLQNPNHSLIVSEKIREKILNSTSVQCKLLSFGRATTSEAILDES------------ 244
Query: 189 KIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNST 248
+E +T+ F + +S+ L G HN N A A L+ IG E++ +
Sbjct: 245 --SSEIRTSKF----IYDISRFYLP-----GTHNRENLAAAILASEA--IGGKPESIQAQ 291
Query: 249 IEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKG-HKCVILLGGQAK 304
I PHR QI +G+++++DSK+TNL + G+ K + ++LGG+ K
Sbjct: 292 IPFFMGLPHRFQIAGEK-RGISFINDSKSTNLHSMLAGMSAWKNLDRTCLILGGRPK 347
>gi|451975660|ref|ZP_21926844.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio
alginolyticus E0666]
gi|451930403|gb|EMD78113.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio
alginolyticus E0666]
Length = 437
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 91/327 (27%), Positives = 152/327 (46%), Gaps = 61/327 (18%)
Query: 18 LACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGN 77
+ +L+ G V+ +++ A + + + +A+TG+NGKSTV G M G++ VGGN
Sbjct: 85 IQAVLEKGTTVVGDIELFAWAVQKPV--IAITGSNGKSTVTDLTGVMAKAAGLDVGVGGN 142
Query: 78 LGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK 137
+G P AL + + V+E+SS+Q+E + + LNL+ DH++R++
Sbjct: 143 IGVP---------ALDLLEHDADLYVLELSSFQLETTSSLKL-KAAAFLNLSEDHMDRYQ 192
Query: 138 TMKNYALTKCHLFSH-------------MVNTKLGLLPFG--NQHLNEAIKGHRFNLAWI 182
M +Y K +F H + ++ L+ FG NQ + G+R W+
Sbjct: 193 GMSDYRQAKLRIFDHADLAVVNRDDQETFPDAEMPLVTFGSDNQDFGLEVDGNR---TWL 249
Query: 183 GAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAV--AALSVLGLDIGV 240
+D + + + +K++G+HN NA V A L G+D
Sbjct: 250 -------LDHGQRVVASD-------------ELKLVGKHNLSNALVVLALLKAAGVDYHN 289
Query: 241 DVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGH-KCVILL 299
+ AL + + HR Q+V D QGV WV+DSKATN+ +T L L+ K +L+
Sbjct: 290 ALNALKNYTGL----THRCQVV-ADNQGVKWVNDSKATNIASTMAALSGLESTGKLYLLV 344
Query: 300 GGQAKVLNGQESNGFEKLIEPLNHHRC 326
GG K G + + + + LN C
Sbjct: 345 GGVGK---GADFSPLKPIFATLNLQLC 368
>gi|424866318|ref|ZP_18290159.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Leptospirillum sp.
Group II 'C75']
gi|124515890|gb|EAY57399.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Leptospirillum
rubarum]
gi|387223115|gb|EIJ77487.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Leptospirillum sp.
Group II 'C75']
Length = 487
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 148/299 (49%), Gaps = 29/299 (9%)
Query: 26 KRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEA 85
+ VM E+++A+ ++ ++AV GTNGKST + L G F+GGN G PLS+
Sbjct: 100 RNVMGEMEWASSWT--AVPLVAVGGTNGKSTTSALLAHFLEAAGERVFLGGNFGTPLSDM 157
Query: 86 AFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALT 145
S P VAVVE+SS+Q E F P V+++LN+TPDHL+R+ ++ +Y
Sbjct: 158 VLS--ERRGSSPLPTVAVVELSSFQAET-MGIFRPVVNLLLNITPDHLDRYLSVDHYRNA 214
Query: 146 KCHLFSHMVNTKLGLLPFGNQH----LNEAIKGHRFNLAWI----GAFP----GVKIDTE 193
K + F M +L N+ + LAW G P G+ ++ +
Sbjct: 215 KWNAFQTMEKESFTVL---NRDPACGVYPPFSPISSRLAWFYGSKGPCPDRTGGLILERD 271
Query: 194 AKTASFE-VPAVGVVS-QLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIE- 250
A +A+ + + + +S L+ ++ MG AA+ + G E + + +E
Sbjct: 272 ALSATLDGIEGLPPISWNLEKFPLEGMGNRQNLAAALLGAVLYLKATGKHPEQVTTVLEE 331
Query: 251 ---ILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVI--LLGGQAK 304
R PHRM++V + +G+ +++DSKATN++AT L GH + +LGG+ K
Sbjct: 332 AAASFRGLPHRMEVVG-EWKGIRFINDSKATNVDATRLALEGYAGHSPFVHLILGGRDK 389
>gi|87301212|ref|ZP_01084053.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Synechococcus
sp. WH 5701]
gi|87284180|gb|EAQ76133.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Synechococcus
sp. WH 5701]
Length = 463
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 137/298 (45%), Gaps = 31/298 (10%)
Query: 18 LACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGN 77
L L + G RV E+ A + I + +TGTNGK+TV + +LNH G++A + GN
Sbjct: 91 LKALRERGVRVCGEMSVAWEA-SNEIPWIGITGTNGKTTVTHLLSHILNHAGLDAPMVGN 149
Query: 78 LGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK 137
+G +E ++ P + VVE+SSYQ+E + P + + LTPDHLERH
Sbjct: 150 VGISAAELLIERREAGATPPDW--LVVELSSYQIE-SSAELAPRLGLWTTLTPDHLERHG 206
Query: 138 TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLN------EAIKGHRFNLAWIGAFPGVKID 191
T++ Y K L + G Q LN A G W+ A G +
Sbjct: 207 TLEAYRAIKRSLLQNC----------GEQLLNADDADLRAHAGSWDRATWVTA--GTRRL 254
Query: 192 TEAKTASFEVPAVGVVSQ-----LQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALN 246
A F G+V + + G HN N +AA + L L G++ +
Sbjct: 255 LGAGLQPFLWIDGGMVMAASGPLFSAAALALPGAHNRQNMVLAAATALKL--GLEPAVIE 312
Query: 247 STIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
+ + PHR++ + R + GV W +DSKATN +A G+ + G V+L GG+ K
Sbjct: 313 AALRSFPGVPHRLEQI-RLLDGVRWFNDSKATNYDAAEVGITAVDG-PMVVLAGGEIK 368
>gi|387879102|ref|YP_006309405.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
parasanguinis FW213]
gi|419800618|ref|ZP_14325891.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
parasanguinis F0449]
gi|385694552|gb|EIG25147.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
parasanguinis F0449]
gi|386792557|gb|AFJ25592.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
parasanguinis FW213]
Length = 449
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 150/301 (49%), Gaps = 31/301 (10%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L+ G V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LEKGIPVLTEVELAYLI--SDAPIIGITGSNGKTTTTTMIGEVLTAAGQGGLLSGNIGFP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A + + +V V+E+SS+Q+ + + F P ++V+ NL P H++ H + +N
Sbjct: 151 ASQVA-------QTATEKEVLVMELSSFQL-MGIEAFHPEIAVITNLMPTHIDYHGSFEN 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAI----KGHRFNLAWIGAFPGVKIDTEAKTA 197
Y K +L +M + +L F NQ L + + K + I G + E
Sbjct: 203 YVAAKWNLQKNMTEKDVIVLNF-NQDLAKELATKTKARVLPFSTIEKVDGAYL--EDGLL 259
Query: 198 SFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPH 257
F+ V ++ + V G HN N A+A ++V + GV+ E + T+ H
Sbjct: 260 KFKGEVV-----MRADELGVPGSHNVEN-ALATIAVAKVR-GVENEVIKETLSAFGGVKH 312
Query: 258 RMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKL 317
R+Q V +IQGV + +DSK+TN+ AT L K +++ GG + N F++L
Sbjct: 313 RLQYVD-EIQGVKFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------GNEFDEL 365
Query: 318 I 318
+
Sbjct: 366 V 366
>gi|124022231|ref|YP_001016538.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
[Prochlorococcus marinus str. MIT 9303]
gi|123962517|gb|ABM77273.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Prochlorococcus
marinus str. MIT 9303]
Length = 460
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 148/306 (48%), Gaps = 24/306 (7%)
Query: 18 LACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGN 77
L L Q G + E+ A + + + +A+TGTNGK+TV + +L G++A +GGN
Sbjct: 86 LTALRQRGIDIDGEMAVAWRSLSH-LPWIAITGTNGKTTVTHLLNHVLESNGLKAPMGGN 144
Query: 78 LGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK 137
+G+ +E A + +P + V+E+SSYQ+E + P + + NLTPDHLERH
Sbjct: 145 VGHAAAEIALKWRQPNAQRPDW--LVMELSSYQIEAAPE-IAPRIGIWTNLTPDHLERHG 201
Query: 138 TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGA-FPGVKIDTEAKT 196
T+ Y K L +++ + + L+ L W+ + PG T
Sbjct: 202 TLDAYRKIKRGLLER---SEIRIFNGDDPDLSSQRSSWDKGL-WVSSEGPG----TANHR 253
Query: 197 ASFEVPAVGVVSQLQ-----LHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEI 251
A F + A G+V Q + + G+HN N + ++ G+ +A+ +++
Sbjct: 254 ADFWIDAEGLVRDPQGALFAASALAMPGQHNLQN--LLMVTAAARQTGLPAKAIEASLRS 311
Query: 252 LRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQES 311
PHR++ + IQ ++ +DSKATN +A C GL + V+L GGQ K G S
Sbjct: 312 FPGVPHRLEELGH-IQQMSVYNDSKATNYDAACVGLKAVPA-PAVVLAGGQTK--QGDAS 367
Query: 312 NGFEKL 317
++L
Sbjct: 368 GWLKQL 373
>gi|121635446|ref|YP_975691.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Neisseria
meningitidis FAM18]
gi|433494001|ref|ZP_20451076.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis NM762]
gi|433496183|ref|ZP_20453229.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis M7089]
gi|433498267|ref|ZP_20455282.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis M7124]
gi|433500203|ref|ZP_20457193.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis NM174]
gi|158513150|sp|A1KVL5.1|MURD_NEIMF RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|120867152|emb|CAM10919.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis FAM18]
gi|432231792|gb|ELK87450.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis NM762]
gi|432236548|gb|ELK92155.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis M7124]
gi|432236949|gb|ELK92552.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis M7089]
gi|432237390|gb|ELK92985.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis NM174]
Length = 445
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 143/287 (49%), Gaps = 26/287 (9%)
Query: 23 QSGKRVMSELDFAAQVI-PRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
Q+G RV+ +++ A ++ R K++A+TG+NGK+TV + VG + G++ + GN+G P
Sbjct: 89 QNGGRVLGDIELLADIVNRRGDKVIAITGSNGKTTVTSLVGYLCIKCGLDTVIAGNIGTP 148
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
+ EA + K V V+E+SS+Q+E + PT + VLN++ DHL+R+ + +
Sbjct: 149 VLEAEWQ-----REGKKADVWVLELSSFQLE-NTESLRPTAATVLNISEDHLDRYDDLLD 202
Query: 142 YALTKCHLFS----HMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTA 197
YA TK +F ++N + A+K + W E +T
Sbjct: 203 YAHTKAKIFRGDGVQVLNA--------DDAFCRAMKRAGREVKWFSLEHEADFWLERETG 254
Query: 198 SFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPH 257
+ G + ++ + G H + A V A L +G+ EAL ++ + PH
Sbjct: 255 RLK---QGNEDLIATKDIPLQGLH--NAANVMAAVALCEAVGLPREALLEHVKTFQGLPH 309
Query: 258 RMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
R++ + + GV ++DDSK TN+ AT + L+ + ++LGG K
Sbjct: 310 RVEKIGKK-NGVVFIDDSKGTNVGATAAAIAGLQ-NPLFVILGGMGK 354
>gi|297569452|ref|YP_003690796.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Desulfurivibrio
alkaliphilus AHT2]
gi|296925367|gb|ADH86177.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Desulfurivibrio
alkaliphilus AHT2]
Length = 497
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 93/315 (29%), Positives = 148/315 (46%), Gaps = 43/315 (13%)
Query: 24 SGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLS 83
+G ++ EL A + + ++AVTGTNGKSTV T VG++L G FVGGNLG PL
Sbjct: 105 AGVPIIGELALAPEYL--RTPVIAVTGTNGKSTVTTLVGELLRAAGRNVFVGGNLGTPLC 162
Query: 84 EAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYA 143
E +A P + AV+EVSS+Q++ K F P ++V+LN++PDHL+R+ YA
Sbjct: 163 E----YLAGPQ---EADWAVLEVSSFQLDSAGK-FSPDIAVLLNISPDHLDRYPDYAAYA 214
Query: 144 LTKCHLFSHMVNTKLGLLPFGNQHLNEAIK--------GHRFNLAWIGAFPGVKIDTEAK 195
+K + ++ + ++ N+ E ++ F G G +++
Sbjct: 215 ASKWRIVANQGREQWAVI---NRDDPEILRLLAAGPPASRVFGFGGRG-MAGPLAANQSR 270
Query: 196 TASFEVPAVGV----------VSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEAL 245
A+ P G+ + L ++ N NA A L+ G A+
Sbjct: 271 EAAPGPPVDGLRLCLTQEDEHCEEYPLPANELAVEPNRQNALAAVLAA--RLAGCPPAAV 328
Query: 246 NSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKV 305
+ + PHR+ +V + GV + DDSKATN+ A + L L G V+L+ G
Sbjct: 329 GPALAAFQALPHRLALVA-TVAGVRYYDDSKATNIGAVISALQGLPGP--VVLIAG---- 381
Query: 306 LNGQESNGFEKLIEP 320
G + G +L+ P
Sbjct: 382 --GLDKGGDYRLLLP 394
>gi|194477145|ref|YP_002049324.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamatesynthetase [Paulinella
chromatophora]
gi|171192152|gb|ACB43114.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamatesynthetase [Paulinella
chromatophora]
Length = 457
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 148/302 (49%), Gaps = 28/302 (9%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
L Q+ +M E+ A +V+ + I +A+TGTNGK+TV V +L++ G+EA + GN+G
Sbjct: 88 LRQNCFPLMGEMVLAWEVLGK-IPWIAITGTNGKTTVTHLVNHLLSYAGLEAPMCGNIGF 146
Query: 81 PLSEAAFHCIALPSSKPKFQVA---VVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK 137
++ +AL SK K + +VE+SSYQ+E P + + LTPDHLERH
Sbjct: 147 SATD-----LALSLSKKKINIPDWLIVELSSYQIE-SAPVIRPNIVLWTTLTPDHLERHN 200
Query: 138 TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTA 197
T+ NY K L N+ +L + L+ + G N W+ + K
Sbjct: 201 TLFNYRSIKSSLVE---NSNYQILNADDLDLSSS-AGSWPNANWVSTDLQFALSKNIKPV 256
Query: 198 SFEVPAVGVVSQ-----LQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEIL 252
+ A G V+ ++G HN N +AA +GL I + + ++
Sbjct: 257 LW--IADGYVTNQDGPIFSADGFNLVGVHNQQNLLMAA--AVGLKISLSPKIISEAFRCF 312
Query: 253 RTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESN 312
PHR+ ++ R +G+ + +DSKATN +A + ++G ++L GGQ K E+N
Sbjct: 313 PGVPHRLDLI-RSYKGIHFYNDSKATNYDAAEVAIKAVEG-PIIVLAGGQTK---KGEAN 367
Query: 313 GF 314
G+
Sbjct: 368 GW 369
>gi|385327770|ref|YP_005882073.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis alpha710]
gi|308388622|gb|ADO30942.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis alpha710]
Length = 445
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 142/283 (50%), Gaps = 18/283 (6%)
Query: 23 QSGKRVMSELDFAAQVI-PRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
Q+G RV+ +++ A ++ R K++A+TG+NGK+TV + VG + G++ + GN+G P
Sbjct: 89 QNGGRVLGDIELLADIVNRRGDKVIAITGSNGKTTVTSLVGYLCIKCGLDTVIAGNIGTP 148
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
+ EA + K V V+E+SS+Q+E + PT + VLN++ DHL+R+ + +
Sbjct: 149 VLEAEWQ-----REGKKADVWVLELSSFQLE-NTESLRPTAATVLNISEDHLDRYDDLLD 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEV 201
YA TK +F L + + A+K + W E +T +
Sbjct: 203 YAHTKAKIFRGDGVQVLNV----DDAFCRAMKRAGREVKWFSLEHEADFWLERETGRLK- 257
Query: 202 PAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQI 261
G + ++ + G H + A V A L +G+ EAL ++ + PHR++
Sbjct: 258 --QGNEDLIATKDIPLQGLH--NAANVMAAVALCEAVGLPREALLEHVKTFQGLPHRVEK 313
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
+ + GV ++DDSK TN+ AT + L+ + ++LGG K
Sbjct: 314 IGKK-NGVVFIDDSKGTNVGATAAAIAGLQ-NPLFVILGGMGK 354
>gi|33863701|ref|NP_895261.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
[Prochlorococcus marinus str. MIT 9313]
gi|60390535|sp|Q7V5V5.1|MURD_PROMM RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|33635284|emb|CAE21609.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Prochlorococcus
marinus str. MIT 9313]
Length = 460
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 148/307 (48%), Gaps = 26/307 (8%)
Query: 18 LACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGN 77
L L Q G + E+ A + + + +A+TGTNGK+TV + +L G+ A +GGN
Sbjct: 86 LTALRQRGIDIDGEMAVAWRSLSH-LPWIAITGTNGKTTVTHLLNHVLESNGLRAPMGGN 144
Query: 78 LGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK 137
+G+ +E A + +P + V+E+SSYQ+E + P + + NLTPDHLERH
Sbjct: 145 VGHAAAEVALKWRQPNAQRPDW--LVMELSSYQIEAAPE-IAPRMGIWTNLTPDHLERHG 201
Query: 138 TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGA-FPGVKIDTEAKT 196
T+ Y K L +++ + + L L W+ + PG T
Sbjct: 202 TLDAYRTIKRGLLER---SEIRIFNGDDPDLRSQRSSWDKGL-WVSSEGPG----TANHR 253
Query: 197 ASFEVPAVGVVSQLQ-----LHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEI 251
A F + A G+V + Q + + G+HN N + ++ G+ +A+ +++
Sbjct: 254 ADFWIDAEGLVREPQGALFAASALAMPGQHNLQN--LLLVTAAARQTGLPAKAIEASLRS 311
Query: 252 LRTPPHRM-QIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQE 310
PHR+ Q+ H IQ ++ +DSKATN +A C GL + V+L GGQ K G
Sbjct: 312 FPGVPHRLEQLGH--IQQMSVYNDSKATNYDAACVGLKAVP-PPAVVLAGGQTK--QGDA 366
Query: 311 SNGFEKL 317
S ++L
Sbjct: 367 SGWLKQL 373
>gi|433468621|ref|ZP_20426056.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis 98080]
gi|432205840|gb|ELK61856.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis 98080]
Length = 445
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 143/287 (49%), Gaps = 26/287 (9%)
Query: 23 QSGKRVMSELDFAAQVI-PRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
Q+G RV+ +++ A ++ R K++A+TG+NGK+TV + VG + G++ + GN+G P
Sbjct: 89 QNGGRVLGDIELLADIVNRRGDKVIAITGSNGKTTVTSLVGYLCIKCGLDTVIAGNIGTP 148
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
+ EA + K V V+E+SS+Q+E + PT + VLN++ DHL+R+ + +
Sbjct: 149 VLEAEWQ-----REGKKADVWVLELSSFQLE-NTESLRPTAATVLNISEDHLDRYDDLLD 202
Query: 142 YALTKCHLFS----HMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTA 197
YA TK +F ++N + A+K + W E +T
Sbjct: 203 YAHTKAKIFRGDGVQVLNA--------DDAFCRAMKRAGREVKWFSLEYEADFWLERETG 254
Query: 198 SFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPH 257
+ G + ++ + G H + A V A L +G+ EAL ++ + PH
Sbjct: 255 RLK---QGNEDLIATQDIPLQGLH--NAANVMAAVALCEAVGLPREALLEHVKTFQGLPH 309
Query: 258 RMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
R++ + + GV ++DDSK TN+ AT + L+ + ++LGG K
Sbjct: 310 RVEKIG-EKNGVVFIDDSKGTNVGATAAAIAGLQ-NPLFVILGGMGK 354
>gi|402496530|ref|YP_006555790.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Wolbachia
endosymbiont of Onchocerca ochengi]
gi|398649803|emb|CCF77973.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Wolbachia
endosymbiont of Onchocerca ochengi]
Length = 446
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 144/280 (51%), Gaps = 32/280 (11%)
Query: 27 RVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAA 86
++ S+++ + ++ K++ VTGTNGKST + +G +L G + VGGNLG P+ +
Sbjct: 96 KIKSDIELFLEGKAKNQKVIGVTGTNGKSTTTSLIGHILKSAGKKVAVGGNLGVPVFDL- 154
Query: 87 FHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTK 146
++ V+E SS+Q+E+ N+ ++V+LN+TPDH++RH +M+NY K
Sbjct: 155 ---------NRNTEICVIEFSSFQLELINEVNLD-IAVLLNITPDHIDRHGSMENYIAIK 204
Query: 147 CHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGV 206
L + +G + I FN F G K+ A + SF+ P G+
Sbjct: 205 SKLINGSRVAAIG--------CDSEITAGIFN-----KFTGNKVPISA-SMSFQYPDTGI 250
Query: 207 VSQLQLH--NMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHR 264
+L+ H ++K+ N N A AA +V L + VD + I+ HR +++ +
Sbjct: 251 HLELENHVSDVKINLISNSENVA-AACTVCKL-LRVDSNIIIDGIKSFSGLKHRNELLGK 308
Query: 265 DIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
I V +V+DSKATN E++ ++ K ++GG++K
Sbjct: 309 -IANVLFVNDSKATNAESSEKAILSYKN--IYWIVGGKSK 345
>gi|345429823|ref|YP_004822941.1| UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase [Haemophilus
parainfluenzae T3T1]
gi|301155884|emb|CBW15353.1| UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase [Haemophilus
parainfluenzae T3T1]
Length = 437
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 151/314 (48%), Gaps = 40/314 (12%)
Query: 5 WLFLLEFQLKATGLA-------CLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTV 57
WL + + + GLA L +G V+ +++ + + I + +TG+NGKSTV
Sbjct: 63 WLLESDIIVISPGLAVKTPEIQTALSAGVEVIGDIELFCRAATKPI--IGITGSNGKSTV 120
Query: 58 VTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY 117
T V +M GI+ +GGN+G P AL + V+E+SS+Q+E
Sbjct: 121 TTLVYEMAKAAGIKVGMGGNIGIP---------ALSLLNEDCDLYVLELSSFQLETTYS- 170
Query: 118 FCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGL---LPFGNQHLNEAIKG 174
+ VLN+T DH++R+ +++Y K ++ + + L L FG N+A K
Sbjct: 171 LKAAAATVLNVTEDHMDRYVDLEDYRQAKLRIYHNAETAVVNLEDKLTFGEGE-NQAKK- 228
Query: 175 HRFNLAWIGAFPGVKIDTEAKTAS---FEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAAL 231
+ +F + D KT + + + V+ L ++GRHNY N + A
Sbjct: 229 -------VVSFAENQADYWLKTENGKQYLMAKEEVI--LPCDEATLVGRHNYMN--ILAA 277
Query: 232 SVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLK 291
+ L +G+++EA+ + + + HR Q+ H+ GV W++DSKATN+ +T L L
Sbjct: 278 TALAQAVGINLEAIRTALRQFKGLDHRFQLAHQ-ANGVRWINDSKATNVGSTVAALAGLY 336
Query: 292 GHKCV-ILLGGQAK 304
+ +LLGG K
Sbjct: 337 VEGTLHLLLGGDGK 350
>gi|255066179|ref|ZP_05318034.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Neisseria sicca
ATCC 29256]
gi|255049724|gb|EET45188.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Neisseria sicca
ATCC 29256]
Length = 445
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 143/289 (49%), Gaps = 30/289 (10%)
Query: 23 QSGKRVMSELDFAAQVI-PRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
Q+G RV+ +++ A ++ R K++A+TG+NGK+TV + VG + G++ + GN+G P
Sbjct: 89 QNGGRVLGDIELLADIVNRRGDKVIAITGSNGKTTVTSLVGYLCIKCGLDTVIAGNIGTP 148
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
+ EA L K V V+E+SS+Q+E + PT + VLN++ DHL+R+ + +
Sbjct: 149 VLEA-----ELQREGKKADVWVLELSSFQLE-NTESLRPTAATVLNISEDHLDRYDDLLD 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLN------EAIKGHRFNLAWIGAFPGVKIDTEAK 195
YA TK +F G Q LN A+K + W E +
Sbjct: 203 YAHTKAKIFRGD----------GVQVLNSDDVFCRAMKRAGREVKWFSLEHEADFWLERE 252
Query: 196 TASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTP 255
T + G + ++ + G H + A V A L +G+ EAL ++ +
Sbjct: 253 TGRLK---QGNEDLIATQDIPLQGLH--NAANVMAAVALCEAVGLPREALLEHVKTFQGL 307
Query: 256 PHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
PHR++ + + GV ++DDSK TN+ AT + L+ + ++LGG K
Sbjct: 308 PHRVEKIG-EKNGVVFIDDSKGTNVGATAAAIAGLQ-NPLFVILGGMGK 354
>gi|328955355|ref|YP_004372688.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Coriobacterium
glomerans PW2]
gi|328455679|gb|AEB06873.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Coriobacterium
glomerans PW2]
Length = 470
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 89/282 (31%), Positives = 135/282 (47%), Gaps = 18/282 (6%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
+M E +FA ++ P + +AVTGTNGK+T V+ GQ+L+ I V GN+G E A
Sbjct: 97 IMGEPEFAWRLSPE--RWIAVTGTNGKTTTVSLTGQLLSAARIPCEVVGNIG----ETAI 150
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
+ F V E+SSYQ+ ++ F P +V+LN+TPDHL H+ +NYA K
Sbjct: 151 SQVDRRQDGDWF---VAELSSYQLATTSE-FHPRAAVLLNITPDHLRWHRGFENYARAKL 206
Query: 148 HLFSHMVNTKLGLLPFGNQHL----NEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPA 203
+ ++ L ++ + L ++ I HR L P + V
Sbjct: 207 KILQNLDENDLAIIDVDDPGLRRLGSQVIASHRRILRLAHDDPASVDAAFVRAGRLVVRL 266
Query: 204 VGVVSQL-QLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIV 262
G+ L ++ + V G HN NA A+ S L D A++ + + HRM+
Sbjct: 267 DGIEHDLARVSELAVAGAHNVSNALAASASALLA-GASDA-AVSEGLRAFSSLEHRMEPA 324
Query: 263 HRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
DI GV + +DSKATN +A L G + ++LLGG K
Sbjct: 325 G-DIDGVRFYNDSKATNTDAVEKALTAFPGDRVILLLGGYDK 365
>gi|419798035|ref|ZP_14323478.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Neisseria sicca
VK64]
gi|385696376|gb|EIG26865.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Neisseria sicca
VK64]
Length = 445
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 143/289 (49%), Gaps = 30/289 (10%)
Query: 23 QSGKRVMSELDFAAQVI-PRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
Q+G RV+ +++ A ++ R K++A+TG+NGK+TV + VG + G++ + GN+G P
Sbjct: 89 QNGGRVLGDIELLADIVNRRGDKVIAITGSNGKTTVTSLVGYLCIKCGLDTVIAGNIGTP 148
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
+ EA L K V V+E+SS+Q+E + PT + VLN++ DHL+R+ + +
Sbjct: 149 VLEA-----ELQREGKKADVWVLELSSFQLE-NTESLRPTAATVLNISEDHLDRYDDLLD 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLN------EAIKGHRFNLAWIGAFPGVKIDTEAK 195
YA TK +F G Q LN A+K + W E +
Sbjct: 203 YAHTKAKIFRGD----------GVQVLNSDDVFCRAMKRAGREVKWFSLEHEADFWLERE 252
Query: 196 TASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTP 255
T + G + ++ + G H + A V A L +G+ EAL ++ +
Sbjct: 253 TGRLK---QGNEDLIATQDIPLQGLH--NAANVMAAVALCEAVGLPREALLEHVKTFQGL 307
Query: 256 PHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
PHR++ + + GV ++DDSK TN+ AT + L+ + ++LGG K
Sbjct: 308 PHRVEKIG-EKNGVVFIDDSKGTNVGATAAAIAGLQ-NPLFVILGGMGK 354
>gi|354582291|ref|ZP_09001193.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Paenibacillus
lactis 154]
gi|353199690|gb|EHB65152.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Paenibacillus
lactis 154]
Length = 477
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 158/332 (47%), Gaps = 61/332 (18%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
++ G V++E++ A + + ++ +TG+NGK+T T+VGQ+L G+ V GN+G P
Sbjct: 93 MELGVPVVTEVEVAYHIC--AAPMIGITGSNGKTTTTTWVGQLLEDAGLSPIVAGNIGTP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
LSEAA + P + VVE+SS+Q++ + F P ++ +LN+ HL+ H M +
Sbjct: 151 LSEAAQE------ANPDNWM-VVELSSFQLK-GTEDFRPRIAALLNIAETHLDYHGGMDD 202
Query: 142 YALTKCHLFSHMVNT-------------------KLGLLPFGNQHLNEAIKGHRFNLAWI 182
Y +K LF++ K +LPF +NE ++ + +
Sbjct: 203 YIASKAKLFANQTADDTAVLNWDDPVCRSLVPYIKARILPF---SMNEVLREGVYVMPPY 259
Query: 183 GA---FPGVK------IDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSV 233
GA PG + + T+ K + E+ +++ N+ + GR N NA A S
Sbjct: 260 GAEGQMPGGEEPERTVVYTDEKGFTHEI--------IRVENIGLPGRFNVGNALAA--SA 309
Query: 234 LGLDIGVDVEALNSTIEILRTPPHRMQIV-HRDIQGVTWVDDSKATNLEATCTGLMDLKG 292
+ + GV + L + R HR++ V RD G+ + ++SKATN +AT L K
Sbjct: 310 IAITAGVSPDRLEPVLSSFRGVEHRLEFVDERD--GIAYYNNSKATNSKATNMALTSFK- 366
Query: 293 HKCVILLGGQAKVLNGQESNGFEKLIEPLNHH 324
V++ GG + + +E+L+ L
Sbjct: 367 EPVVLIAGGLDR------GSDYEELVPSLRER 392
>gi|404252666|ref|ZP_10956634.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Sphingomonas sp.
PAMC 26621]
Length = 364
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 132/285 (46%), Gaps = 46/285 (16%)
Query: 28 VMSELDFAAQV---IPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSE 84
++ +++ AQ +PR K++ +TGTNGKST V +L I + +GGN+G P+ E
Sbjct: 28 ILGDIELFAQARSDLPRH-KVVGITGTNGKSTTTALVHHILQTAKIPSLMGGNIGLPILE 86
Query: 85 AAFHCIALPSSKPKFQ--VAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNY 142
+P + V V+E+SSYQ+++ C V+V+LN+TPDHL+R+ Y
Sbjct: 87 ----------QQPLTEGGVYVLELSSYQIDLTQSLDC-DVAVLLNITPDHLDRYDGFDAY 135
Query: 143 ALTKCHLFSHMVNTKLGLLPFGNQH---LNEAIKGHRFNLAWIGAFPGVKIDTEAKTASF 199
A +K LF ++ G+ + ++ L I PGV +D
Sbjct: 136 AASKARLFEMQSPEHAAIIGIGDTPSALIARSLSARSEQLTKIA--PGVCMD-------- 185
Query: 200 EVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRM 259
Q + G HN NA A L GV A++ + PHRM
Sbjct: 186 -----------QSRWPSLQGPHNAQNALAAIAVAQAL--GVSEAAIDEGLRSFTGLPHRM 232
Query: 260 QIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
+ V R GV WV+DSKATN E+T L + +LGG+AK
Sbjct: 233 ERV-RTHNGVAWVNDSKATNPESTAPALAAFD--RIHWILGGEAK 274
>gi|349610789|ref|ZP_08890115.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Neisseria sp.
GT4A_CT1]
gi|348615608|gb|EGY65120.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Neisseria sp.
GT4A_CT1]
Length = 445
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 143/289 (49%), Gaps = 30/289 (10%)
Query: 23 QSGKRVMSELDFAAQVI-PRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
Q+G RV+ +++ A ++ R K++A+TG+NGK+TV + VG + G++ + GN+G P
Sbjct: 89 QNGGRVLGDIELLADIVNRRGDKVIAITGSNGKTTVTSLVGYLCIKCGLDTVIAGNIGTP 148
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
+ EA L K V V+E+SS+Q+E + PT + VLN++ DHL+R+ + +
Sbjct: 149 VLEA-----ELQREGKKADVWVLELSSFQLE-NTESLRPTAATVLNISEDHLDRYDDLLD 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLN------EAIKGHRFNLAWIGAFPGVKIDTEAK 195
YA TK +F G Q LN A+K + W E +
Sbjct: 203 YAHTKAKIFRGD----------GVQVLNSDDVFCRAMKRAGREVKWFSLEHEADFWLERE 252
Query: 196 TASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTP 255
T + G + ++ + G H + A V A L +G+ EAL ++ +
Sbjct: 253 TGRLK---QGDEDLIATQDIPLQGLH--NAANVMAAVALCEAVGLPREALLEHVKTFQGL 307
Query: 256 PHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
PHR++ + + GV ++DDSK TN+ AT + L+ + ++LGG K
Sbjct: 308 PHRVEKIG-EKNGVVFIDDSKGTNVGATAAAIAGLQ-NPLFVILGGMGK 354
>gi|78484911|ref|YP_390836.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Thiomicrospira
crunogena XCL-2]
gi|118595701|sp|Q31I61.1|MURD_THICR RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|78363197|gb|ABB41162.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Thiomicrospira
crunogena XCL-2]
Length = 449
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 145/299 (48%), Gaps = 41/299 (13%)
Query: 20 CLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLG 79
C+ Q G V+ +++ A+ + I +A+TG+NGKSTV T V + L G VGGN+G
Sbjct: 80 CINQ-GTEVIGDIELFARAAGKPI--VAITGSNGKSTVTTLVAEALKEAGYAVGVGGNIG 136
Query: 80 NPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTV-SVVLNLTPDHLERHKT 138
P A + P+ +F V V+E+SS+Q+E Y T+ + VLN++ DH++R+
Sbjct: 137 CP----ALDLLTHPT---EFDVYVLELSSFQLE--TTYSLQTIAATVLNISEDHMDRYLA 187
Query: 139 MKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGH--RFNLAWIGAFP----GVKIDT 192
+++Y K + + NT+L +LP + + A G RF L + A P G+ +
Sbjct: 188 LEDYIQAKMTILN---NTELAVLPLDFERVGIARPGDEVRFGLNYAEALPPKEYGIVMKN 244
Query: 193 EAKTASFE----VPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNST 248
+E VP + Q G H+ NA A+ L +
Sbjct: 245 GQAWLGWEDHASVPVTAMAQQ---------GLHHQLNA--LAMMALCRPFDLSDAVFEKV 293
Query: 249 IEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLK---GHKCVILLGGQAK 304
++ + PHR Q+V +GV W++DSK TN+ AT T + +K + +++ GG K
Sbjct: 294 LKTFKGLPHRTQVVLEQ-EGVRWINDSKGTNVGATVTAIESIKETLDGQVILIAGGVGK 351
>gi|229846167|ref|ZP_04466279.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Haemophilus
influenzae 7P49H1]
gi|229811171|gb|EEP46888.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Haemophilus
influenzae 7P49H1]
Length = 437
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 153/314 (48%), Gaps = 40/314 (12%)
Query: 5 WLFLLEFQLKATGLA-------CLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTV 57
WL + + + GLA L++G V+ +++ + + I + +TG+NGKSTV
Sbjct: 62 WLLESDMIVISPGLAVKTPEIQTALKAGVEVIGDIELFCRTATKPI--VGITGSNGKSTV 119
Query: 58 VTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY 117
T V +M G++ +GGN+G P AL ++ V+E+SS+Q+E
Sbjct: 120 TTLVYEMAKAAGVKVGMGGNIGIP---------ALSLLNEDCELYVLELSSFQLETTYS- 169
Query: 118 FCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLL------PFGNQHLNEA 171
+ VLN+T DH++R+ +++Y K ++ N K+G+L FG N+A
Sbjct: 170 LKAAAATVLNVTEDHMDRYVDLEDYRQAKLRIYH---NAKVGVLNNEDSLTFGEGE-NQA 225
Query: 172 IKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAAL 231
+ F A GA +K + + + + L ++GRHNY N + A
Sbjct: 226 EQIVSF--AENGADYWLKTENGKQYLMAKDEVI-----LPCEEATLVGRHNYMN--ILAA 276
Query: 232 SVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLK 291
+ L +G++++A+ + + + HR Q+ H+ GV W++DSKATN+ +T L L
Sbjct: 277 TALAQAVGINLDAIRTALRQFKGLDHRFQLAHQ-ANGVRWINDSKATNVGSTVAALAGLY 335
Query: 292 GH-KCVILLGGQAK 304
K +LLGG K
Sbjct: 336 VEGKLHLLLGGDGK 349
>gi|375264444|ref|YP_005021887.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Vibrio sp.
EJY3]
gi|369839768|gb|AEX20912.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Vibrio sp.
EJY3]
Length = 437
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 96/315 (30%), Positives = 152/315 (48%), Gaps = 37/315 (11%)
Query: 18 LACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGN 77
+ +L G V+ +++ A + + ++A+TG+NGKSTV G M G+ VGGN
Sbjct: 85 IQSVLSQGIPVVGDIELFAWAVTK--PVVAITGSNGKSTVTDLTGVMAKAAGLSVGVGGN 142
Query: 78 LGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK 137
+G P AL + + V+E+SS+Q+E + + LNL+ DH++R++
Sbjct: 143 IGVP---------ALDLLDQEADLYVLELSSFQLETTSSLKL-KAAAFLNLSEDHMDRYE 192
Query: 138 TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIG----AFPGVKIDTE 193
+M +Y K +F+H L N+ E H + G AF G++ D E
Sbjct: 193 SMADYRSAKLRIFNH------AELAVVNRDDQETFPDHDMPVVTFGCDEQAF-GLETDGE 245
Query: 194 AKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILR 253
KT + + S +K++G+HN N V L++L GVD +T++
Sbjct: 246 -KTWLLDHGQRVIASD----ELKLVGKHNLANVLV-VLALLKA-AGVDCHNTLNTLKNYT 298
Query: 254 TPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGL--MDLKGHKCVILLGGQAKVLNGQES 311
HR Q+V D QGV WV+DSKATN+ +T L ++L G K +L+GG K G +
Sbjct: 299 GLTHRCQVVE-DNQGVKWVNDSKATNIASTMAALSGLELTG-KLYLLVGGVGK---GADF 353
Query: 312 NGFEKLIEPLNHHRC 326
E + LN C
Sbjct: 354 TPLEPIFATLNLQLC 368
>gi|261364816|ref|ZP_05977699.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Neisseria
mucosa ATCC 25996]
gi|288566851|gb|EFC88411.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Neisseria
mucosa ATCC 25996]
Length = 445
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 143/289 (49%), Gaps = 30/289 (10%)
Query: 23 QSGKRVMSELDFAAQVI-PRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
Q+G RV+ +++ A ++ R K++A+TG+NGK+TV + VG + G++ + GN+G P
Sbjct: 89 QNGGRVLGDIELLADIVNRRGDKVIAITGSNGKTTVTSLVGYLCIKCGLDTVIAGNIGTP 148
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
+ EA L K V V+E+SS+Q+E + PT + VLN++ DHL+R+ + +
Sbjct: 149 VLEA-----ELQRESKKADVWVLELSSFQLE-NTESLRPTAATVLNISEDHLDRYDDLLD 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLN------EAIKGHRFNLAWIGAFPGVKIDTEAK 195
YA TK +F G Q LN A+K + W E +
Sbjct: 203 YAHTKAKIFRGD----------GVQVLNSDDVFCRAMKRAGREVKWFSLEHEADFWLERE 252
Query: 196 TASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTP 255
T + G + ++ + G H + A V A L +G+ EAL ++ +
Sbjct: 253 TGRLK---QGNEDLIATQDIPLQGLH--NAANVMAAVALCEAVGLPREALLEHVKTFQGL 307
Query: 256 PHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
PHR++ + + GV ++DDSK TN+ AT + L+ + ++LGG K
Sbjct: 308 PHRVEKIG-EKNGVVFIDDSKGTNVGATAAAIAGLQ-NLLFVILGGMGK 354
>gi|374584607|ref|ZP_09657699.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Leptonema illini
DSM 21528]
gi|373873468|gb|EHQ05462.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Leptonema illini
DSM 21528]
Length = 460
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 87/273 (31%), Positives = 128/273 (46%), Gaps = 32/273 (11%)
Query: 44 KILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAV 103
+I+A+TGT+GKST + +L GI+A GN G P S A P++ V V
Sbjct: 114 RIVAITGTDGKSTTTALIAHLLREAGIQALECGNYGLPFSAAVLQ----PTT-----VFV 164
Query: 104 VEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPF 163
E SSYQ+E + YF P V ++LN+ PDHL+R+ M +Y K +LFS ++
Sbjct: 165 CECSSYQLEDLH-YFKPDVGLLLNIAPDHLDRYAGMADYLRAKLNLFSLQEKEDFAVIGP 223
Query: 164 GNQHLNEAIKGHRFNLAWIGA--FPGVKIDTEAKTASFEVPAVGV-VSQLQLHNMKVMGR 220
G + IGA FPG ++++ + PA + + L V
Sbjct: 224 GILATCHEL--------GIGADEFPG-RLNSVLTEVGEDKPAARLGDATLAWSEFAVNSE 274
Query: 221 HNYHN-----AAVAALSVLGLDIGVDVEALNSTI----EILRTPPHRMQIVHRDIQGVTW 271
N N A + AL G+D G A + + R PHR +IV + +GV +
Sbjct: 275 TNRRNAVMTLAGIEALLKKGVDGGYAATAFYERVLRGLKSFRGLPHRQEIVV-EREGVIF 333
Query: 272 VDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
V+DSKAT + A + + G K +LLGG K
Sbjct: 334 VNDSKATTVHAALSAVASFPGKKVYLLLGGLDK 366
>gi|224024607|ref|ZP_03642973.1| hypothetical protein BACCOPRO_01334 [Bacteroides coprophilus DSM
18228]
gi|224017829|gb|EEF75841.1| hypothetical protein BACCOPRO_01334 [Bacteroides coprophilus DSM
18228]
Length = 444
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 150/306 (49%), Gaps = 32/306 (10%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
L + G ++SE++FA + K++ +TG+NGK+T + + + G+ + GN+G
Sbjct: 83 LKEQGTPIISEIEFAGRYT--QAKMICITGSNGKTTTTSLIYHIFKKAGLNVGLAGNIGQ 140
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDHLERH-KT 138
L A +K + V+E+SS+Q++ N Y F ++V++N+TPDHL+R+
Sbjct: 141 SL--------AFQVAKCNYDYYVIELSSFQLD--NMYKFHANIAVLMNITPDHLDRYGYQ 190
Query: 139 MKNYALTKCHLFSHMVNTKLGLL----PFGNQHLNE-AIKGHRFNLAWIGAFPGVKIDTE 193
M+NY K + + + + P + L++ I GH + A G+ E
Sbjct: 191 MQNYVDAKFRIIQNQTDADAFIFWNDDPVIQRELHKYGIHGHYYPFAEKRE-EGLAAFVE 249
Query: 194 AKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDI-GVDVEALNSTIEIL 252
F P + ++ + + G HN N+ A +S +I G+ E + +
Sbjct: 250 ENKVYFTEP---IAFNMEQEELALTGTHNLFNSMAAGISA---NIAGIRKECIREALNDF 303
Query: 253 RTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESN 312
+ HR++ V R ++GV +++DSKATN+ + L +K K V++LGG+ K G + N
Sbjct: 304 KGVEHRLEKVCR-VRGVEYINDSKATNVNSCWYALQSMKT-KTVLILGGKDK---GNDYN 358
Query: 313 GFEKLI 318
L+
Sbjct: 359 EIADLV 364
>gi|340363640|ref|ZP_08685963.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Neisseria
macacae ATCC 33926]
gi|339885319|gb|EGQ75048.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Neisseria
macacae ATCC 33926]
Length = 445
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 143/289 (49%), Gaps = 30/289 (10%)
Query: 23 QSGKRVMSELDFAAQVI-PRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
Q+G RV+ +++ A ++ R K++A+TG+NGK+TV + VG + G++ + GN+G P
Sbjct: 89 QNGGRVLGDIELLADIVNRRGDKVIAITGSNGKTTVTSLVGYLCIKCGLDTVIAGNIGTP 148
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
+ EA L K V V+E+SS+Q+E + PT + VLN++ DHL+R+ + +
Sbjct: 149 VLEA-----ELQREGKKADVWVLELSSFQLE-NTESLRPTAATVLNISEDHLDRYDDLLD 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLN------EAIKGHRFNLAWIGAFPGVKIDTEAK 195
YA TK +F G Q LN A+K + W E +
Sbjct: 203 YAHTKAKIFRGD----------GVQVLNSDDVFCRAMKRAGREVKWFSLEHEADFWLERE 252
Query: 196 TASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTP 255
T + G + ++ + G H + A V A L +G+ EAL ++ +
Sbjct: 253 TGRLK---QGNEDLIATQDIPLQGLH--NAANVMAAVALCEAVGLPREALLEHVKTFQGL 307
Query: 256 PHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
PHR++ + + GV ++DDSK TN+ AT + L+ + ++LGG K
Sbjct: 308 PHRVEKIG-EKNGVVFIDDSKGTNVGATAAAIAGLQ-NPLFVILGGMGK 354
>gi|189462921|ref|ZP_03011706.1| hypothetical protein BACCOP_03622 [Bacteroides coprocola DSM 17136]
gi|189430348|gb|EDU99332.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Bacteroides
coprocola DSM 17136]
Length = 444
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 151/307 (49%), Gaps = 32/307 (10%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
L + G ++SE++FA + + K++ +TG+NGK+T + + + G+ + GN+G
Sbjct: 83 LKEQGTPIISEIEFAGRYT--NAKMICITGSNGKTTTTSLIYHIFKKAGLNVGLAGNIGQ 140
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDHLERHK-T 138
L+ C + V+E+SS+Q++ N Y F ++V++N+TPDHL+R+
Sbjct: 141 SLAYQVAEC--------NYDYYVIELSSFQLD--NMYKFHANIAVLMNITPDHLDRYDYK 190
Query: 139 MKNYALTKCHLFSHMVNTKLGLL----PFGNQHLNE-AIKGHRFNLAWIGAFPGVKIDTE 193
M+NY K + + + + P + L++ I GH + A G+ E
Sbjct: 191 MQNYVDAKFRIIQNQTDNDAFIFWNDDPVIQKELHKYGIHGHYYPFAEKKE-EGLAAFVE 249
Query: 194 AKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDI-GVDVEALNSTIEIL 252
F P + ++ + + G HN N+ A +S +I G+ E + +
Sbjct: 250 QNKVYFTKP---IEFNMEQEELALTGTHNLFNSMAAGISA---NIAGIRKECIREALSDF 303
Query: 253 RTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESN 312
+ HR++ V R ++GV +++DSKATN+ + L +K K V++LGG+ K G + N
Sbjct: 304 KGVEHRLEKVTR-VRGVDYINDSKATNVNSCWYALNSMKT-KTVLILGGKDK---GNDYN 358
Query: 313 GFEKLIE 319
L++
Sbjct: 359 EIADLVK 365
>gi|256372027|ref|YP_003109851.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Acidimicrobium
ferrooxidans DSM 10331]
gi|256008611|gb|ACU54178.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Acidimicrobium
ferrooxidans DSM 10331]
Length = 437
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 93/280 (33%), Positives = 130/280 (46%), Gaps = 41/280 (14%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I AVTGTNGKSTV T ML G A GNLG PLS A S + VV
Sbjct: 107 ITAVTGTNGKSTVTTLTASML---GDGAVAAGNLGTPLSAVA------DSGARRL---VV 154
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFG 164
EVSS+Q+ + F +V+ VLNLTP+HL+ H + + Y K L + + + P G
Sbjct: 155 EVSSFQL-VWAPTFRASVATVLNLTPNHLDYHGSFEAYRAAKARLIERLAPGDVAVWPVG 213
Query: 165 NQHLNEAIKGHRFNLAWIGAFP-GVKIDT---EAKTASFEVPAVGVV--SQLQLHNMKVM 218
++ AI A P GV++ T A+ A + V +V L ++ +
Sbjct: 214 EGAVD-AI-----------AIPRGVEVRTFSATARDADYRVEHGALVGPDGRTLVRVEEL 261
Query: 219 GRHNYHNAA-VAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKA 277
GR H+ A + A L G ++E R HR+Q+V G+T+VDDSKA
Sbjct: 262 GRRAPHDVANMLAAWALAEASGAELERARRVAREFRGLAHRLQVVAVR-GGLTYVDDSKA 320
Query: 278 TNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKL 317
T EA + + V++ GG+ K GFE+L
Sbjct: 321 TTPEAAVAAVRSF--DRVVLIAGGRTK------GTGFERL 352
>gi|366162519|ref|ZP_09462274.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Acetivibrio
cellulolyticus CD2]
Length = 464
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 135/284 (47%), Gaps = 23/284 (8%)
Query: 25 GKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSE 84
G ++ SE++ +V P +I AVTG++GK+T T + ML G ++GGN+G PL
Sbjct: 101 GAQITSEMEVFFEVCPA--QIFAVTGSDGKTTTTTLIYNMLTAQGYNCWLGGNIGTPL-- 156
Query: 85 AAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYAL 144
++ + V+E+SS+Q+ P V+VV NL P+HL+ HK+M Y
Sbjct: 157 -----LSKIDEIKETDKVVLELSSFQLHTMT--LSPNVAVVTNLAPNHLDMHKSMDEYIE 209
Query: 145 TKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAF----PGVKIDTEAKTASFE 200
K ++F H + +L F N E K + N+ + G K+D E S
Sbjct: 210 AKKNIFLHQSKSDKVILNFDNDITREFSKDVKGNVVYFSRVNKIDSGAKMDGEMLVYS-- 267
Query: 201 VPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQ 260
+ + ++ + G HN N A +V+ V+++ + + HR++
Sbjct: 268 -DGKDIREIVNSGDIVIPGVHNIENYLAAIAAVIDY---VEIDTIKRVATTFKGVEHRIE 323
Query: 261 IVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
+V R++ G+ + +DS A++ T GL K K +++ GG K
Sbjct: 324 LV-RELDGIKFYNDSIASSPSRTIAGLNSFK-QKVILIAGGYDK 365
>gi|421543854|ref|ZP_15989941.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis NM140]
gi|421545883|ref|ZP_15991940.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis NM183]
gi|421552207|ref|ZP_15998186.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis NM576]
gi|402325037|gb|EJU60451.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis NM183]
gi|402325113|gb|EJU60525.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis NM140]
gi|402332360|gb|EJU67687.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis NM576]
Length = 445
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 143/287 (49%), Gaps = 26/287 (9%)
Query: 23 QSGKRVMSELDFAAQVI-PRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
Q+G RV+ +++ A ++ R K++A+TG+NGK+TV + VG + G++ + GN+G P
Sbjct: 89 QNGGRVLGDIELLADIVNRRGDKVIAITGSNGKTTVTSLVGYLCIKCGLDTVIAGNIGTP 148
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
+ EA L K V V+E+SS+Q+E + PT + VLN++ DHL+R+ + +
Sbjct: 149 VLEA-----ELQREGKKADVWVLELSSFQLE-NTESLRPTAATVLNISEDHLDRYDDLLD 202
Query: 142 YALTKCHLFS----HMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTA 197
YA TK +F ++N + A+K + W E +T
Sbjct: 203 YAHTKAKIFRGDGVQVLNA--------DDAFCRAMKRAGREVKWFSLEHEADFWLERETG 254
Query: 198 SFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPH 257
+ G + ++ + G H + A V A L +G+ EAL ++ + PH
Sbjct: 255 RLK---QGNEDLIATKDIPLQGLH--NAANVMAAVALCEAVGLPREALLEHVKTFQGLPH 309
Query: 258 RMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
R++ + + GV ++DDSK TN+ AT + L+ + ++LGG K
Sbjct: 310 RVEKIG-EKNGVVFIDDSKGTNVGATAAAIAGLQ-NPLFVILGGMGK 354
>gi|419801738|ref|ZP_14326952.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Haemophilus
parainfluenzae HK262]
gi|419845825|ref|ZP_14369088.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Haemophilus
parainfluenzae HK2019]
gi|385193117|gb|EIF40498.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Haemophilus
parainfluenzae HK262]
gi|386414863|gb|EIJ29405.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Haemophilus
parainfluenzae HK2019]
Length = 437
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 151/314 (48%), Gaps = 40/314 (12%)
Query: 5 WLFLLEFQLKATGLA-------CLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTV 57
WL + + + GLA L +G V+ +++ + + I + +TG+NGKSTV
Sbjct: 63 WLLESDIIVISPGLAVKTPEIQTALSAGVEVIGDIELFCRAATKPI--VGITGSNGKSTV 120
Query: 58 VTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY 117
T V +M GI+ +GGN+G P AL + V+E+SS+Q+E
Sbjct: 121 TTLVYEMAKSAGIKVGMGGNIGIP---------ALSLLNEDCDLYVLELSSFQLETTYS- 170
Query: 118 FCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGL---LPFGNQHLNEAIKG 174
+ VLN+T DH++R+ +++Y K ++ + L L FG N+A K
Sbjct: 171 LKAAAATVLNVTEDHMDRYVDLEDYRQAKLRIYHKAETAVVNLEDKLTFGEGE-NQAKK- 228
Query: 175 HRFNLAWIGAFPGVKIDTEAKTAS---FEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAAL 231
+ +F + D KT + + + V+ L ++GRHNY N + A
Sbjct: 229 -------VVSFAENQADYWLKTENGKQYLMAKEEVI--LPCDEATLVGRHNYMN--ILAA 277
Query: 232 SVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLK 291
+ L +G+++EA+ +T+ + HR Q+ ++ GV W++DSKATN+ +T L L
Sbjct: 278 TALAQAVGINLEAIRTTLRQFKGLDHRFQLAYQ-ANGVRWINDSKATNVGSTVAALAGLY 336
Query: 292 GHKCV-ILLGGQAK 304
+ +LLGG K
Sbjct: 337 VEGTLHLLLGGDGK 350
>gi|433502385|ref|ZP_20459355.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis NM126]
gi|432243059|gb|ELK98574.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis NM126]
Length = 445
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 142/283 (50%), Gaps = 18/283 (6%)
Query: 23 QSGKRVMSELDFAAQVI-PRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
Q+G RV+ +++ A ++ R K++A+TG+NGK+TV + VG + G++ + GN+G P
Sbjct: 89 QNGGRVLGDIELLADIVNRRGDKVIAITGSNGKTTVTSLVGYLCIKCGLDTVIAGNIGTP 148
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
+ EA + K V V+E+SS+Q+E + PT + VLN++ DHL+R+ + +
Sbjct: 149 VLEAEWQ-----REGKKADVWVLELSSFQLE-NTESLRPTAATVLNISEDHLDRYDDLLD 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEV 201
YA TK +F L + + A+K + W E +T +
Sbjct: 203 YAHTKAKIFRGDGVQVLNV----DDAFCRAMKRAGREVKWFSLEHEADFWLERETGRLK- 257
Query: 202 PAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQI 261
G + ++ + G H + A V A L +G+ EAL ++ + PHR++
Sbjct: 258 --QGNEDLIATKDIPLQGLH--NAANVMAAVALCEAVGLPREALLEHVKTFQGLPHRVEK 313
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
+ + GV ++DDSK TN+ AT + L+ + ++LGG K
Sbjct: 314 IG-EKNGVVFIDDSKGTNVGATAAAIAGLQ-NPLFVILGGMGK 354
>gi|416168390|ref|ZP_11607945.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis OX99.30304]
gi|421541751|ref|ZP_15987866.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis NM255]
gi|421547942|ref|ZP_15993973.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis NM2781]
gi|325130846|gb|EGC53579.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis OX99.30304]
gi|402319231|gb|EJU54742.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis NM255]
gi|402327284|gb|EJU62675.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis NM2781]
Length = 445
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 142/283 (50%), Gaps = 18/283 (6%)
Query: 23 QSGKRVMSELDFAAQVI-PRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
Q+G RV+ +++ A ++ R K++A+TG+NGK+TV + VG + G++ + GN+G P
Sbjct: 89 QNGGRVLGDIELLADIVNRRGDKVIAITGSNGKTTVTSLVGYLCIKCGLDTVIAGNIGTP 148
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
+ EA + K V V+E+SS+Q+E + PT + VLN++ DHL+R+ + +
Sbjct: 149 VLEAEWQ-----REGKKADVWVLELSSFQLE-NTESLRPTAATVLNISEDHLDRYDDLLD 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEV 201
YA TK +F L + + A+K + W E +T +
Sbjct: 203 YAHTKAKIFRGDGVQVLNV----DDAFCRAMKRAGREVKWFSLEHEADFWLERETGRLK- 257
Query: 202 PAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQI 261
G + ++ + G H + A V A L +G+ EAL ++ + PHR++
Sbjct: 258 --QGNEDLIATKDIPLQGLH--NAANVMAAVALCEAVGLPREALLEHVKTFQGLPHRVEK 313
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
+ + GV ++DDSK TN+ AT + L+ + ++LGG K
Sbjct: 314 IG-EKNGVVFIDDSKGTNVGATAAAIAGLQ-NPLFVILGGMGK 354
>gi|308271438|emb|CBX28046.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [uncultured
Desulfobacterium sp.]
Length = 468
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 97/312 (31%), Positives = 157/312 (50%), Gaps = 55/312 (17%)
Query: 23 QSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPL 82
++G ++ E++ A++ I I +A+TGTNGK+T G+ML G++ FVGGN+GNPL
Sbjct: 90 KNGASIIGEIELASRFIKEPI--VAITGTNGKTTTTILTGKMLEESGLKVFVGGNIGNPL 147
Query: 83 SEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNY 142
I S K + V E+SS+Q++ +YF P VSV+LN+T DHL+R+ Y
Sbjct: 148 -------IDYVDSGNKADIVVAEISSFQLDTI-EYFSPKVSVLLNITEDHLDRYPDFNAY 199
Query: 143 ALTKCHLFSHMVNTKLG----------------------LLPFGNQH-LNE-----AIKG 174
A +K +F +N K G +LPF N + LN+ I
Sbjct: 200 AKSKMRIF---INQKDGDYAVFNASDKHISLMAKDIKCRILPFFNHNTLNDYNEFAKIAD 256
Query: 175 HR--FNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALS 232
R FN+ I A + D +FE L + ++G+HN N VAA +
Sbjct: 257 DRIVFNINNIAA---INSDATNPDKTFEKEF-----SLPFSGIHLLGKHNMEN--VAAAT 306
Query: 233 VLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKG 292
+ L G ++ + S +E ++ PHR++ V I GV + +DSKAT +++ L ++
Sbjct: 307 LATLAAGGNIAGIKSALEKFKSLPHRIEHVAT-INGVEYYNDSKATTVDSVIKAL-EVFN 364
Query: 293 HKCVILLGGQAK 304
++++GG+ K
Sbjct: 365 KPVILIMGGRNK 376
>gi|294670612|ref|ZP_06735490.1| hypothetical protein NEIELOOT_02336 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291307651|gb|EFE48894.1| hypothetical protein NEIELOOT_02336 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 445
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 143/287 (49%), Gaps = 26/287 (9%)
Query: 23 QSGKRVMSELDFAAQVI-PRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
Q+G RV+ +++ A V+ R K++A+TG+NGK+TV + VG + G++ + GN+G P
Sbjct: 89 QNGGRVLGDIELLADVVNRRGDKVIAITGSNGKTTVTSLVGYLCIKCGLDTVIAGNIGTP 148
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
+ EA L K V V+E+SS+Q+E + PT + VLN++ DHL+R+ + +
Sbjct: 149 VLEA-----ELQREGKKADVWVLELSSFQLE-NTESLRPTAATVLNISEDHLDRYDDLLD 202
Query: 142 YALTKCHLFS----HMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTA 197
YA TK +F ++N + A+K + W E +T
Sbjct: 203 YAHTKDKIFRGGGVQVLNA--------DDAFCRAMKRAGREVKWFSLEHEADFWLERETG 254
Query: 198 SFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPH 257
+ ++S ++ + G H + A V A L G+ EAL I+ + PH
Sbjct: 255 RLKQGNEDLIST---QDIPLQGLH--NAANVMAAVALCEAAGLPREALLEHIKTFQGLPH 309
Query: 258 RMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
R++ + + GV ++DDSK TN+ AT + L+ + ++LGG K
Sbjct: 310 RVEKIG-EKNGVVFIDDSKGTNVGATAAAIAGLQ-NPLFVILGGMGK 354
>gi|117922177|ref|YP_871369.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Shewanella
sp. ANA-3]
gi|117614509|gb|ABK49963.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Shewanella sp.
ANA-3]
Length = 439
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 149/314 (47%), Gaps = 37/314 (11%)
Query: 22 LQSGKRVMSELD-FAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
L G V+ +++ FA ++ R ++ +TG+NGKSTV T VG+ML G+ VGGN+G
Sbjct: 87 LDMGIEVIGDVELFAREIADRKPCVIGITGSNGKSTVTTLVGEMLREAGMAVAVGGNIGI 146
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMK 140
P AL + V+E+SS+Q+E + C S LN+T DH++R+ M
Sbjct: 147 P---------ALDLLTENADIFVLELSSFQLETTHSLNC-VASTCLNVTEDHMDRYSDMD 196
Query: 141 NYALTKCHLF---SHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTA 197
Y K L+ ++ + L + +N+ + F LA D++
Sbjct: 197 AYRKAKLRLYHQSRSIIFNRDDALTIPTEPMNQ----NSFGLAPPEGDEWGICDSKIYHG 252
Query: 198 SFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPH 257
E+ + + + ++G HN+ N +AA++++ +GV+ + + H
Sbjct: 253 HSEI--------MPITEVSLIGSHNHAN-LLAAMALV-YAVGVEKQVMAKVARTFTGLSH 302
Query: 258 RMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGH--KCVILLGGQAKVLNGQESNGFE 315
R ++V GVT+V+DSKATN+ AT L L H +++ GG K + F
Sbjct: 303 RCEVVGVK-AGVTYVNDSKATNVGATVAALDGLSDHLGDIILIAGGDGKGAD------FS 355
Query: 316 KLIEPLNHHRCVIT 329
L+EPL +IT
Sbjct: 356 PLVEPLTKVTHLIT 369
>gi|424807602|ref|ZP_18233010.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio mimicus
SX-4]
gi|342325544|gb|EGU21324.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio mimicus
SX-4]
Length = 408
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 151/328 (46%), Gaps = 61/328 (18%)
Query: 2 WML-WLFLLEFQLKATGLAC-------LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNG 53
W L WL + + G+A +L +G V+ +++ A + + ++A+TG+NG
Sbjct: 29 WNLEWLLSADLVVTNPGIALATPEIQQVLATGIPVVGDIELFAWHVDK--PVIAITGSNG 86
Query: 54 KSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEI 113
KSTV G + N G++ VGGN+G P AL P+ ++ V+E+SS+Q+E
Sbjct: 87 KSTVTDLSGVLANAAGVKTAVGGNIGVP---------ALDLISPEVELYVLELSSFQLET 137
Query: 114 PNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIK 173
+ + LNL+ DH++R++ M++Y K +F H +
Sbjct: 138 TSSLKL-KAAAFLNLSEDHMDRYQGMEDYRQAKLRIFDHAETAVV--------------- 181
Query: 174 GHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLH--------------NMKVMG 219
N + FP + T E PA V++ Q H + ++G
Sbjct: 182 ----NADDVQTFPDHAAHLQVVTFGVEQPAQFSVAEHQGHEYLFARDNAVLASSELSLVG 237
Query: 220 RHNYHN--AAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKA 277
RHN N +A L G+++ + ++AL S + HR Q+V D G+ WV+DSKA
Sbjct: 238 RHNVANVLTVLALLDSAGVNVRLALDALKSYTGLT----HRCQVV-ADNHGIKWVNDSKA 292
Query: 278 TNLEATCTGLMDLKGH-KCVILLGGQAK 304
TN+ +T L LK + +L+GG K
Sbjct: 293 TNVASTLAALSGLKVEGQLYLLVGGVGK 320
>gi|157826844|ref|YP_001495908.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Rickettsia
bellii OSU 85-389]
gi|157802148|gb|ABV78871.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Rickettsia
bellii OSU 85-389]
Length = 450
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 145/288 (50%), Gaps = 35/288 (12%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
+ S++D + + + +LAVTGTNGKST + +L+ G++ + GN+G P+ +A
Sbjct: 90 ITSDIDLFFEK-SKGLNLLAVTGTNGKSTTTALISHILSDNGLDYPIAGNIGVPVLQA-- 146
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
+SK + V+E+SS+Q+++ K F ++V+LN+TPDHL+RH+ M+ Y K
Sbjct: 147 -----KASKGGY---VLELSSFQLDLV-KTFAAKIAVLLNITPDHLDRHENMEGYITAKS 197
Query: 148 HLFSHMVNTKLGLLPFGNQHLNEA---------IKGHRFNLAWIGAFPGVKIDTEAKTAS 198
+F M G++ N + +E IK F++ I G+ I + T +
Sbjct: 198 KIFDRMDKDSYGIINIDNDYCHEIFTNLQQKHHIKLIPFSVTKILE-KGISIVNDIITDN 256
Query: 199 FEVPAVGVVSQLQLHNMKVMGRHNYHN--AAVAALSVLGLDIGVDVEALNSTIEILRTPP 256
F +S + N + G HN N A+ A ++GL+ +E+++S + P
Sbjct: 257 F----FEHISFKLISNKSLQGIHNSENIAASYAVARIIGLEPVKIIESISS----FQGLP 308
Query: 257 HRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
HRMQ + +I + + +DSKATN A + L L GG AK
Sbjct: 309 HRMQYL-GNIDDINFYNDSKATNAIAAVQSIKALDN--IYWLAGGIAK 353
>gi|296314335|ref|ZP_06864276.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Neisseria
polysaccharea ATCC 43768]
gi|296838885|gb|EFH22823.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Neisseria
polysaccharea ATCC 43768]
Length = 445
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 143/287 (49%), Gaps = 26/287 (9%)
Query: 23 QSGKRVMSELDFAAQVIP-RSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
Q+G RV+ +++ A ++ R K++A+TG+NGK+TV + VG + G++ + GN+G P
Sbjct: 89 QNGGRVLGDIELLADIVNHRGDKVIAITGSNGKTTVTSLVGYLCIKCGLDTVIAGNIGTP 148
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
+ EA + K V V+E+SS+Q+E + PT + VLN++ DHL+R+ + +
Sbjct: 149 VLEAEWQ-----REGKKADVWVLELSSFQLE-NTESLRPTAATVLNISEDHLDRYDDLLD 202
Query: 142 YALTKCHLFS----HMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTA 197
YA TK +F ++N + A+K + W E +T
Sbjct: 203 YAHTKDKIFRGDGVQVLNA--------DDAFCRAMKRAGREVKWFSLEHEADFWLERETG 254
Query: 198 SFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPH 257
+ + G + ++ + G H + A V A L +G+ EAL ++ + PH
Sbjct: 255 TLK---QGDEDLIATQDIPLQGLH--NAANVMAAVALCEAVGLPREALLEHVKTFQGLPH 309
Query: 258 RMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
R++ + GV ++DDSK TN+ AT + L+ + ++LGG K
Sbjct: 310 RVEKIGEK-NGVVFIDDSKGTNVGATAAAIAGLQ-NPLFVILGGMGK 354
>gi|226226832|ref|YP_002760938.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Gemmatimonas
aurantiaca T-27]
gi|226090023|dbj|BAH38468.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Gemmatimonas
aurantiaca T-27]
Length = 464
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 90/288 (31%), Positives = 147/288 (51%), Gaps = 20/288 (6%)
Query: 23 QSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPL 82
++G V+ E++ A ++ P +++ +AVTGTNGK+T +G +L LG++A GN+G P+
Sbjct: 94 EAGVPVVGEVEIALRLQP-ALRYIAVTGTNGKTTTTALIGHLLRALGVDAADVGNIGTPV 152
Query: 83 SEAAFHCIALPSSKPKFQVAVVEVSSYQM-EIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S +AL + P + A +E+SS+Q+ + P Y P V V+ L+PDHL+R+ ++
Sbjct: 153 S-----ALALQETPPAW--AALEMSSFQLHDTPGIY--PDVGVLTTLSPDHLDRYTSVAE 203
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEV 201
Y K LF + V+ + + + E ++G W +D S +
Sbjct: 204 YYGDKQRLFLNAVSQSRWVATADSDAVRELVQGIEGQWYWFSTKQTDGMDASYHHESGML 263
Query: 202 PAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLD----IGVDVEALNSTIEILRTPPH 257
+G + + + G HN N A LSV+ D G AL + R PPH
Sbjct: 264 HVLG-APLMARDRVPLAGDHNVANVLAAVLSVMVADASFRTGTARAALADAVATFRAPPH 322
Query: 258 RMQ-IVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
R++ +VHR V W++DSKATN+ +T L + V+LLGG+ K
Sbjct: 323 RLETVVHR--HDVVWINDSKATNVASTLVALAGMT-RPTVVLLGGRHK 367
>gi|116626353|ref|YP_828509.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Candidatus
Solibacter usitatus Ellin6076]
gi|122251657|sp|Q01Q46.1|MURD_SOLUE RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|116229515|gb|ABJ88224.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Candidatus
Solibacter usitatus Ellin6076]
Length = 442
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 145/299 (48%), Gaps = 23/299 (7%)
Query: 25 GKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSE 84
G RV+ E++ AA + + + +TG+NGK+T + G +L G+ VGGN+G P++
Sbjct: 86 GVRVIGEVELAAPFL--KGRTIGITGSNGKTTTTSLTGHILREAGVPVQVGGNIGLPVT- 142
Query: 85 AAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYAL 144
A+ S V+E+SS+Q+E ++ F + + LN+T +HL+RH T +NYA
Sbjct: 143 ------AMVESSRDDGWNVLELSSFQLETIHE-FRAHIGLALNVTQNHLDRHHTFENYAA 195
Query: 145 TKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAV 204
K LF +L + R + W + K+D A ++
Sbjct: 196 IKGRLFETQQAGDYAVLNAEDPVCVAYAARTRATVQWFSSRK--KVDPGATLCGNKLVLF 253
Query: 205 GVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHR 264
G + ++ + + GRHN N V A ++ GV+ A+ + + R HR++ V R
Sbjct: 254 GKL-LMEAGEIPIRGRHNIEN--VLAAAIAASRAGVEHAAIAAAVRSFRAVEHRLEFV-R 309
Query: 265 DIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPLNH 323
+ GV + +DSKAT+++AT L G VI LGG+ K L+ + L EPL
Sbjct: 310 KLNGVDFYNDSKATSVDATLKALDAFPGGLWVI-LGGKDKGLD------YAALREPLTE 361
>gi|387121181|ref|YP_006287064.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|415756273|ref|ZP_11481011.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Aggregatibacter
actinomycetemcomitans D17P-3]
gi|416038508|ref|ZP_11574159.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Aggregatibacter
actinomycetemcomitans serotype a str. H5P1]
gi|416044367|ref|ZP_11574994.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Aggregatibacter
actinomycetemcomitans serotype d str. I63B]
gi|416055534|ref|ZP_11579588.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Aggregatibacter
actinomycetemcomitans serotype e str. SCC393]
gi|416071304|ref|ZP_11583769.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Aggregatibacter
actinomycetemcomitans serotype f str. D18P1]
gi|429733334|ref|ZP_19267581.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Aggregatibacter
actinomycetemcomitans Y4]
gi|444333734|ref|ZP_21149452.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Aggregatibacter
actinomycetemcomitans serotype a str. A160]
gi|347994966|gb|EGY36196.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Aggregatibacter
actinomycetemcomitans serotype a str. H5P1]
gi|347996252|gb|EGY37355.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Aggregatibacter
actinomycetemcomitans serotype d str. I63B]
gi|347998646|gb|EGY39557.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Aggregatibacter
actinomycetemcomitans serotype f str. D18P1]
gi|348002942|gb|EGY43604.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Aggregatibacter
actinomycetemcomitans serotype e str. SCC393]
gi|348655844|gb|EGY71275.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Aggregatibacter
actinomycetemcomitans D17P-3]
gi|385875673|gb|AFI87232.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|429155066|gb|EKX97767.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Aggregatibacter
actinomycetemcomitans Y4]
gi|443551351|gb|ELT59253.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Aggregatibacter
actinomycetemcomitans serotype a str. A160]
Length = 434
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 95/324 (29%), Positives = 152/324 (46%), Gaps = 61/324 (18%)
Query: 5 WLFLLEFQLKATGLA-------CLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTV 57
WL + + + GLA LQ+G V+ +++ + + I +A+TG+NGKSTV
Sbjct: 61 WLLESDLIVISPGLAVKTPEIQTALQAGVEVLGDIELFCREADKPI--VAITGSNGKSTV 118
Query: 58 VTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY 117
T V +M G+ +GGN+G P AL ++ + V+E+SS+Q+E Y
Sbjct: 119 TTLVAEMAKAAGLRVGMGGNIGIP---------ALSLLNQQYDLYVLELSSFQLE--TTY 167
Query: 118 FCPTV-SVVLNLTPDHLERHKTMKNYALTKCHLFSH----MVNTKLGL-LP--------- 162
V + VLN+T DH+ R+ +++Y K ++++H ++N + L LP
Sbjct: 168 SLKAVAATVLNVTEDHMNRYMDLQDYRHAKLNIYNHCQTAVINAEDALTLPATQRPQKQV 227
Query: 163 -FGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRH 221
FG H + +K N ++ A+ EA A E MK+ GRH
Sbjct: 228 SFGENHADYWLKTEN-NKTYLMAYD------EAVLACDE--------------MKLTGRH 266
Query: 222 NYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLE 281
NY NA A G+++ + + + HR Q+ H GV W++DSKATN+
Sbjct: 267 NYMNALAAIALAQA--AGINLTGIRTALCAFGGLEHRFQVAHI-ADGVRWINDSKATNVG 323
Query: 282 ATCTGLMDLK-GHKCVILLGGQAK 304
+T L L+ K +LLGG K
Sbjct: 324 STVAALTGLQVAGKLHLLLGGDGK 347
>gi|431795709|ref|YP_007222613.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Echinicola
vietnamensis DSM 17526]
gi|430786474|gb|AGA76603.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Echinicola
vietnamensis DSM 17526]
Length = 449
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 147/309 (47%), Gaps = 34/309 (11%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V+ EL+FA R +++A+TGTNGK+T ++ G++ +GGN+G +
Sbjct: 89 VIDELEFAYG-FSRG-RVIAITGTNGKTTTAMLTYHLMKTGGLDVGLGGNVGQSWASQLV 146
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK-TMKNYALTK 146
V+EVSS+Q++ + P V+V+ N+TPDHL+R+ M +Y +K
Sbjct: 147 QG--------DHDWWVLEVSSFQID-GFRSLKPKVAVLTNITPDHLDRYDYKMDHYVQSK 197
Query: 147 CHLFSHMVNTKLGLLPFGNQH-------LNEAIKGHRFNLAWIGAFPGVKIDTEAKTASF 199
L M + +QH +N K H +L IG G+ TE K +F
Sbjct: 198 LGLLKQMDEEDDFIYYREDQHTWQGMSQINVRPKIHEISLETIGKDGGLFNGTEVKL-NF 256
Query: 200 EVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRM 259
+ + + M + G HN N A S L G+ EAL + + + PHRM
Sbjct: 257 RNHMISIPER----EMAMKGNHNMLNVMCA--STAALLAGISEEALKAGLADFKNAPHRM 310
Query: 260 QIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLIE 319
++V R+++GVT+++DSK TN++AT L K + + GG K N +E L+
Sbjct: 311 ELV-RELEGVTFINDSKGTNVDATVYALSTFK-EPLIWIAGGVDK------GNDYETLMP 362
Query: 320 PLNHHRCVI 328
+ H V+
Sbjct: 363 VVKDHVKVL 371
>gi|348030102|ref|YP_004872788.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Glaciecola
nitratireducens FR1064]
gi|347947445|gb|AEP30795.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Glaciecola
nitratireducens FR1064]
Length = 479
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 142/286 (49%), Gaps = 36/286 (12%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPK-FQVAV 103
++ +TG+NGK+TV +G++L H G++ + GN G + A + +S+ K + V
Sbjct: 111 LIGITGSNGKTTVTDMLGKVLTHAGLQVELAGNYG----KCAIDLLLEEASRVKPLDIVV 166
Query: 104 VEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFS---HMVNTKLGL 160
+E+SSYQ+E+ + +LN+T DHL+RH + Y L K +FS +++ + +
Sbjct: 167 LELSSYQLEMTESLRLE-FATILNITEDHLDRHGSFDAYKLAKQRIFSMSKNIIACRDEV 225
Query: 161 LPF-----GNQHLN---EAIKGHRFNLAWIG---AFPGVKIDTEAKTASFEVPAVGVVSQ 209
L + GN +N E + + A +G G I + KT+ V G VS
Sbjct: 226 LSYPESHVGNNTVNSDQETRQKTKRICAEVGLKSTDTGYSISKDQKTSEPFVQFNG-VSL 284
Query: 210 LQLHNMKVMGRHNYHNAAV--AALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVH---- 263
L ++++ G HNY NA + A L LD + +EA+ + + PHR Q +H
Sbjct: 285 FMLSDLQLKGAHNYINAMIVLAICDQLMLDRKLTIEAICA----YQGLPHRFQTIHASNK 340
Query: 264 ---RDIQGVTWVDDSKATNLEATCTGLMDLKGHK--CVILLGGQAK 304
+ ++W++DSKATN+ A L K V++ GG AK
Sbjct: 341 IDGDKVSNISWINDSKATNVGACQAALACFKNSDDYLVLIAGGDAK 386
>gi|258620874|ref|ZP_05715908.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio mimicus
VM573]
gi|258586262|gb|EEW10977.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio mimicus
VM573]
Length = 440
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 151/328 (46%), Gaps = 61/328 (18%)
Query: 2 WML-WLFLLEFQLKATGLAC-------LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNG 53
W L WL + + G+A +L +G V+ +++ A + + ++A+TG+NG
Sbjct: 61 WNLEWLLSADLVVTNPGIALATPEIQQVLATGIPVVGDIELFAWHVDK--PVIAITGSNG 118
Query: 54 KSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEI 113
KSTV G + N G++ VGGN+G P AL P+ ++ V+E+SS+Q+E
Sbjct: 119 KSTVTDLSGVLANAAGVKTAVGGNIGVP---------ALDLISPEVELYVLELSSFQLET 169
Query: 114 PNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIK 173
+ + LNL+ DH++R++ M++Y K +F H +
Sbjct: 170 TSSLKL-KAAAFLNLSEDHMDRYQGMEDYRQAKLRIFDHAETAVV--------------- 213
Query: 174 GHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLH--------------NMKVMG 219
N + FP + T E PA V++ Q H + ++G
Sbjct: 214 ----NADDVQTFPDHAAHLQVVTFGVEQPAQFSVAEHQGHEYLFARDNAVLASSELSLVG 269
Query: 220 RHNYHN--AAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKA 277
RHN N +A L G+++ + ++AL S + HR Q+V D G+ WV+DSKA
Sbjct: 270 RHNVANVLTVLALLDSAGVNVRLALDALKSYTGLT----HRCQVV-ADNHGIKWVNDSKA 324
Query: 278 TNLEATCTGLMDLKGH-KCVILLGGQAK 304
TN+ +T L LK + +L+GG K
Sbjct: 325 TNVASTLAALSGLKVEGQLYLLVGGVGK 352
>gi|157413927|ref|YP_001484793.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
[Prochlorococcus marinus str. MIT 9215]
gi|157388502|gb|ABV51207.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Prochlorococcus
marinus str. MIT 9215]
Length = 478
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 146/299 (48%), Gaps = 33/299 (11%)
Query: 16 TGLACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVG 75
T + L + G +V+ E++ A +++ + + +TGTNGK+TV + +L G+ A
Sbjct: 94 TTIMELKKKGLKVIGEINVAWEIL-KDTNWIGITGTNGKTTVTHLLSHILCDTGLYAPFA 152
Query: 76 GNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLER 135
GN+G PL + A+ K V E+SSYQ+EI + P + + T DHLER
Sbjct: 153 GNIGTPLCKYAY-----SKKTEKIDWVVAELSSYQIEISPE-VKPNIGIWTTFTEDHLER 206
Query: 136 HKTMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAK 195
HKT++NY K L + + + + +++L + H +L+ GV I T
Sbjct: 207 HKTLENYFNIKKSL---LEKSDFRIYNYDDKNL----RNHYSSLS-----RGVWITTSFD 254
Query: 196 TASFEVPAVGVVSQ----------LQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEAL 245
++F + Q +L + + G HN N + + +G+ + +
Sbjct: 255 KSNFIQCDYWIDDQAFIVERGKKLFKLEHFSLKGMHNLQNLLLVIAA--ARKVGLSGKEI 312
Query: 246 NSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
++ + PHRM+ ++++ + ++DSKATN +++ G+ ++G + +I+ GG+ K
Sbjct: 313 KDSLSNYKQLPHRMETIYKN-DDLEIINDSKATNFDSSIAGISSIEG-QIIIIAGGRLK 369
>gi|339009181|ref|ZP_08641753.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Brevibacillus
laterosporus LMG 15441]
gi|421873582|ref|ZP_16305194.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Brevibacillus
laterosporus GI-9]
gi|338773659|gb|EGP33190.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Brevibacillus
laterosporus LMG 15441]
gi|372457369|emb|CCF14743.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Brevibacillus
laterosporus GI-9]
Length = 457
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 149/311 (47%), Gaps = 35/311 (11%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V++E++ A ++ ++ +TG+NGK+T T VG +L+ ++A VGGN+G L
Sbjct: 96 VITEVELAYRL--SKAPLIGITGSNGKTTTTTLVGLILHAASVDAIVGGNIGTVL----- 148
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
C KP Q V E+SS+Q+ + F P ++ +LNL P HL+ H + + Y KC
Sbjct: 149 -CSLAEEMKPD-QYLVAELSSFQL-MGTDTFRPHIATILNLYPAHLDYHHSFEEYTKAKC 205
Query: 148 HLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAV--- 204
+F++ +LP+ ++ + + + R + + V I E +F +
Sbjct: 206 KIFANQTEEDYAVLPYDHEPVMKVCQNIRAKVFY------VSIKQEVPCGAFIKDGIVYF 259
Query: 205 ----GVVSQ-LQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRM 259
G + + ++ + + G N NA A V+ G D +A+ + HR+
Sbjct: 260 KNEDGKLDEIMKATEISLPGEFNQENALAAI--VMSKLAGADYDAMKHVLRSFSGVEHRL 317
Query: 260 QIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLIE 319
+ V I GV + ++SKATN EA G+ K V++ GG + ++ F +L+
Sbjct: 318 EYVDT-IAGVKYYNNSKATNSEAAIRGIEAFK-EPVVLIAGGLDRGVD------FAELVP 369
Query: 320 PL-NHHRCVIT 329
PL N + +IT
Sbjct: 370 PLKNKVKAIIT 380
>gi|212556524|gb|ACJ28978.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase
(UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase)
(D-glutamic acid adding enzyme) [Shewanella
piezotolerans WP3]
Length = 422
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 155/317 (48%), Gaps = 49/317 (15%)
Query: 25 GKRVMSELDFAAQVIPRS-IKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLS 83
G V+ +++ A+ I S +++ +TG+NGKSTV T VG+M G+ +GGN+G P+
Sbjct: 74 GIEVIGDVELFARAIANSPARVIGITGSNGKSTVTTLVGEMAAAAGLSYTLGGNIGIPVL 133
Query: 84 EAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYA 143
+ + PK ++ V+E+SS+Q+E + C + LN++ DH++R+ +++Y
Sbjct: 134 DLLLN--------PK-ELYVLELSSFQLETTHSLNC-IAATCLNISEDHMDRYNDLESYR 183
Query: 144 LTKCHLFSH---MVNTKLGLLPFGNQHLNEAIKGHRFNL------AWIGAFPGVKIDTEA 194
K +L+ ++ + LL N +N+ + F L AW GA +
Sbjct: 184 QAKLNLYDQSKSVLFNREDLLTLPNSPMNQ----NSFGLDAPEVDAWGGAEGNI-----V 234
Query: 195 KTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRT 254
+ +S +P +S++ L +G HN+ N A +DIG E L +
Sbjct: 235 RGSSVIMP----ISEVAL-----VGSHNHANLIAAMALASSVDIG--REYLVEVAKQFTG 283
Query: 255 PPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGH--KCVILLGGQAKVLNGQESN 312
HR ++V DI GVT+V+DSKATN+ AT + L H + +++ GG K +
Sbjct: 284 LTHRCEVVA-DIAGVTYVNDSKATNVGATVAAIEGLSEHLGELILIAGGDGKGAD----- 337
Query: 313 GFEKLIEPLNHHRCVIT 329
F L L VIT
Sbjct: 338 -FTALATALERVSSVIT 353
>gi|348618065|ref|ZP_08884597.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase
(UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase)
(D-glutamic acid-adding enzyme), murD [Candidatus
Glomeribacter gigasporarum BEG34]
gi|347816577|emb|CCD29262.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase
(UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase)
(D-glutamic acid-adding enzyme), murD [Candidatus
Glomeribacter gigasporarum BEG34]
Length = 543
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 100/355 (28%), Positives = 153/355 (43%), Gaps = 61/355 (17%)
Query: 14 KATGLACLLQSGKR----VMSELDFAAQVIPRS-------IKILAVTGTNGKSTVVTFVG 62
+A +A LL + V EL+F AQ + + K++A+TGTNGK+T VG
Sbjct: 84 RAAEIALLLAEARARGIPVWGELEFFAQALRATEVTAYGQSKVIAITGTNGKTTTAALVG 143
Query: 63 QMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKF-QVAVVEVSSYQMEIPNKYFCPT 121
++ G ++ V GN+G L +A + + K K + V+E+SS+Q+E N+ F P
Sbjct: 144 RLCKRAGYQSCVAGNIGMALLDA----LGVAVDKQKMPDIWVLELSSFQLE-SNQTFAPD 198
Query: 122 VSVVLNLTPDHLERHKTMKNYALTKCHLFS----HMVN-----------TKLGLLPFGNQ 166
V+ LN+TPDHL+ H YA K +F ++N + G G
Sbjct: 199 VAAALNITPDHLDWHGNFDAYAAAKGRIFGASAVRILNRDDAHSMRFALNRAGQTDVGQF 258
Query: 167 HLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFE-------------------VPAVGVV 207
+ H W+ G A+ A P+ V+
Sbjct: 259 TFGLSAPQHAGEYGWMETGDGAAWLALAEAAEAAETCAEISPAAKRARRAADHAPSGIVI 318
Query: 208 SQLQLHN-MKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDI 266
+L + + + G+HN N A LDI + L + R PHR Q + R I
Sbjct: 319 KRLMPASALAIRGKHNISNVLAALALCRALDI--PLAPLLHGLRDYRGEPHRFQCIAR-I 375
Query: 267 QGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPL 321
GV ++DDSK TN+ A L + K V++ GG +K GQ+ F L EP+
Sbjct: 376 NGVDFIDDSKGTNVGALLAALKGAEAQKIVLIAGGVSK---GQD---FSPLAEPV 424
>gi|398337710|ref|ZP_10522415.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Leptospira kmetyi
serovar Malaysia str. Bejo-Iso9]
Length = 464
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 140/282 (49%), Gaps = 28/282 (9%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V SE+D + +I+ VTGT+GKST + +L + GGNLG P +
Sbjct: 80 VFSEIDLGKKFF--HGRIIGVTGTDGKSTTTSLTAHLLRKDFSDLQEGGNLGIPFTSF-- 135
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
SK +AV+E+SSYQ++ + VSV LNL PDHLERHKTM+NY K
Sbjct: 136 -------SKKPISLAVLELSSYQLD-DSSSLNLNVSVFLNLAPDHLERHKTMENYFQAKL 187
Query: 148 HLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVV 207
+ + + N L+ ++ + E I+G + +F T + A + ++ +
Sbjct: 188 KI-ADLFNPGHTLVV--SEKIREKIEGSVSFQCKLKSFG----RTSSSDAFLDENSLTIR 240
Query: 208 SQLQLHNMK---VMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHR 264
+ L +++ + G HN N A + L+ IG E++ + I + + PHR QI
Sbjct: 241 TSLFTYDISRFHLPGTHNRENLAASILAAEA--IGGKPESIQAQIPLFQGLPHRFQIAGE 298
Query: 265 DIQGVTWVDDSKATNLEATCTGLMDLKG--HKCVILLGGQAK 304
G+++++DSK+TNL + G+ K C+I LGG+ K
Sbjct: 299 K-HGLSFINDSKSTNLHSMLAGMATWKNLPQTCLI-LGGRPK 338
>gi|384917152|ref|ZP_10017283.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Methylacidiphilum
fumariolicum SolV]
gi|384525411|emb|CCG93156.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Methylacidiphilum
fumariolicum SolV]
Length = 438
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 140/297 (47%), Gaps = 38/297 (12%)
Query: 13 LKATGLACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEA 72
++ + LA ++++ + D Q P I I +TG+ GKST + + +L G+EA
Sbjct: 81 IRTSHLAIEPSIKEKIVLQTDLFLQFWP-GITI-GITGSKGKSTTTSLIHHLLKTNGLEA 138
Query: 73 FVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFC---PTVSVVLNLT 129
++GGN+G P FH I S K +AV+E+SSYQ+E +C P++++ LNL
Sbjct: 139 YIGGNIGVP----PFHLIPFASEK---AIAVLELSSYQLE-----YCRHSPSIAIWLNLY 186
Query: 130 PDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVK 189
+HL H + + Y+L K ++ + L N L+E LA I PG
Sbjct: 187 QEHLNYHGSFEAYSLAKSNIARFQSSENFFLYNADNPSLSEF-------LASIDPMPGKL 239
Query: 190 IDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTI 249
I + K + + G HN NA AAL+ G+ + + +
Sbjct: 240 IAVDDKWQ----------ETFDCSRLHLPGEHNKRNALFAALTASLF--GISAKKIAESF 287
Query: 250 EILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVL 306
PHR++ V I+GV++ +DS AT EAT G+ + + +I LGGQ + L
Sbjct: 288 ASFYGLPHRLEYV-ATIEGVSYYNDSIATVPEATLAGIEAIPNVESLI-LGGQDRGL 342
>gi|402815853|ref|ZP_10865445.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase MurD [Paenibacillus
alvei DSM 29]
gi|402506893|gb|EJW17416.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase MurD [Paenibacillus
alvei DSM 29]
Length = 472
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 151/300 (50%), Gaps = 29/300 (9%)
Query: 15 ATGLACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFV 74
A +A ++ G V++E++ A Q+ P I+ +TG+NGK+T T+VG ML G++ V
Sbjct: 86 APPVARAIELGIEVVTEVEVAYQLSP--APIIGITGSNGKTTTTTWVGNMLESAGMKPIV 143
Query: 75 GGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLE 134
GN+G PL +AA + VVE+SS+Q++ F P V+ +LN+ HL+
Sbjct: 144 AGNIGTPLCQAA-------QEASEDNTLVVELSSFQLK-GTSAFRPRVACLLNIAETHLD 195
Query: 135 RHKTMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFP----GVKI 190
H TM++Y +K LF++M + + +L ++ + + W+ + GV +
Sbjct: 196 YHGTMEDYVASKARLFANMGSGDIAVLNADDETCRTLSSHIQADQWWVSSMKRVERGVFV 255
Query: 191 DTEAKTASFE-----VPAVG---VVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDV 242
+ + + E V A G V + + + + GR N NA A + + +G +
Sbjct: 256 EPSYEVEAEEEERKIVYADGTGRVFPIISVMELGIPGRFNVDNALAAC--AISIAVGAEP 313
Query: 243 EALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKG-HKCVILLGG 301
AL ++ + HR++ V GV + ++SKATN +AT LM L+ + +IL+ G
Sbjct: 314 SALVESLRSFQGVEHRLEFVSEQ-HGVKYYNNSKATNTKAT---LMALEAFERNIILIAG 369
>gi|349574826|ref|ZP_08886759.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Neisseria
shayeganii 871]
gi|348013614|gb|EGY52525.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Neisseria
shayeganii 871]
Length = 445
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 139/284 (48%), Gaps = 35/284 (12%)
Query: 44 KILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAV 103
KI+A+TG+NGK+TV + VG + G++ V GN+G P+ EA P+ V V
Sbjct: 113 KIIAITGSNGKTTVTSLVGHLCAQAGLDTVVAGNIGTPVLEAYLQRAGKPAD-----VWV 167
Query: 104 VEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPF 163
+E+SS+Q+E + +V LN++ DHL+R+ + +YA +K +F+ L
Sbjct: 168 LELSSFQLETTPE-LDADAAVCLNISEDHLDRYDDLLDYARSKDAIFNGQGVQVLNADDV 226
Query: 164 GNQHLNEAIKGHR-FNLAWIGAFP----GVKIDTEAKTASFEVPAVGVVSQLQLHNMKVM 218
+ + A + R F+L G + +K D EA + E+P +
Sbjct: 227 FCRAMKRAGREVRWFSLHGQGGYALHAGDLKADGEAMMRAAEIP--------------LQ 272
Query: 219 GRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKAT 278
G HN N A G IG+ +AL + + + PHR+++V + GV ++DDSK T
Sbjct: 273 GSHNAANVLAALALCEG--IGLPRDALLAGVRSFQGLPHRVELVA-EKNGVRFIDDSKGT 329
Query: 279 NLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPLN 322
N+ ATC + L V++ GGQ K GQ+ F L E L
Sbjct: 330 NVGATCAAIAGLDA-PIVLVAGGQGK---GQD---FTPLREALK 366
>gi|260655415|ref|ZP_05860903.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Jonquetella
anthropi E3_33 E1]
gi|424845227|ref|ZP_18269838.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Jonquetella
anthropi DSM 22815]
gi|260629863|gb|EEX48057.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Jonquetella
anthropi E3_33 E1]
gi|363986665|gb|EHM13495.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Jonquetella
anthropi DSM 22815]
Length = 438
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/280 (33%), Positives = 143/280 (51%), Gaps = 22/280 (7%)
Query: 25 GKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSE 84
G V+ EL+F A +P K +AVTGTNGK+T +G +L G V GN+G PL+
Sbjct: 87 GIPVVGELEFLAPWLPG--KTIAVTGTNGKTTTTALLGHLLRCRGQSVAVVGNIGEPLAN 144
Query: 85 AAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYAL 144
AA + V+E+SS+Q+ NK F P V+++ NL PDH++ H + +NY
Sbjct: 145 AAGTAV---------DYTVMELSSFQLHW-NKSFTPQVALLTNLAPDHIDWHGSYENYVA 194
Query: 145 TKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAV 204
K +F ++ Q + A+ ++ +G G +I + + E +
Sbjct: 195 DKLKVFGRPGKGNWEIV----QARDAALVPSGGSVCTLGGTEGTRIYWDDQAVWLERDS- 249
Query: 205 GVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHR 264
G + ++G+HN NAA+A ++ +D L + L PPHR Q+V R
Sbjct: 250 GREKLFDRSQLSLVGQHNLENAAMAGAALALID--KSFAPLQGLSDFL-PPPHRCQLV-R 305
Query: 265 DIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
+GVTWVDDSK TN+ +T T L + G K +I+LGG+ K
Sbjct: 306 VRRGVTWVDDSKGTNVASTRTALEGIDGPK-IIILGGKGK 344
>gi|421110786|ref|ZP_15571277.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Leptospira
santarosai str. JET]
gi|410803883|gb|EKS10010.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Leptospira
santarosai str. JET]
Length = 342
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/274 (31%), Positives = 130/274 (47%), Gaps = 23/274 (8%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V SE+D KI+ VTGT+GKST + +L + GGNLG P +
Sbjct: 89 VFSEIDLGRFFFKG--KIIGVTGTDGKSTTTSLTAHLLRKDFSDLREGGNLGTPFTSFCK 146
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
I+L AV+E+SSYQ++ N VSV LNL PDHLERH TM+NY K
Sbjct: 147 KPISL---------AVLELSSYQLDDSNPLHL-DVSVFLNLAPDHLERHTTMENYFQAKL 196
Query: 148 HLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVV 207
+ + + N L+ ++E IK NLA T A A + + +
Sbjct: 197 KI-ADLQNENHFLI------VSEKIKERILNLASFRCKLLSFGRTSASDAFLDENSSKIG 249
Query: 208 SQLQLHNMKVMGRHNYHNAAVAALSVLGLD-IGVDVEALNSTIEILRTPPHRMQIVHRDI 266
+ ++++ HN A S+L + IG E++ + I + + PHR QI
Sbjct: 250 TSKFVYDISGFHLPGTHNGENLAASILAAEAIGGKPESIQAQIPLFKGLPHRFQIAGEK- 308
Query: 267 QGVTWVDDSKATNLEATCTGLMDLKG--HKCVIL 298
QG+++++DSK+TNL + G+ K C+IL
Sbjct: 309 QGISFINDSKSTNLHSMLAGMSTWKNLDRTCLIL 342
>gi|297544895|ref|YP_003677197.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Thermoanaerobacter
mathranii subsp. mathranii str. A3]
gi|296842670|gb|ADH61186.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Thermoanaerobacter
mathranii subsp. mathranii str. A3]
Length = 454
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/300 (31%), Positives = 153/300 (51%), Gaps = 28/300 (9%)
Query: 23 QSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPL 82
Q V E++FA + I A+TGTNGK+T + +G+M + G + +V GN+G PL
Sbjct: 90 QKKIEVFGEVEFAYRF--SKAPIYAITGTNGKTTTTSLLGEMFKNAGRKVYVAGNIGYPL 147
Query: 83 SEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNY 142
A + +S+ F VA E+SS+Q+E K F P +S ++N+TPDHL RHKT +NY
Sbjct: 148 IYAV-----MEASEDAFIVA--EISSFQLETI-KEFKPKISCIINITPDHLNRHKTFENY 199
Query: 143 ALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVP 202
K +F + + +L F ++ + N A FP + ++ A +
Sbjct: 200 RDIKGRIFENQRENEYTVLNF-----DDPVTWSLKNKAKCRVFPFSRKNSLENGAYVKNG 254
Query: 203 AVGVVSQ------LQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPP 256
++ + + + + + G HN N A+AA SV L G+ V+ + +T++ +
Sbjct: 255 SIYISVDKNAKKIIDIEEIYIPGEHNLEN-ALAASSVAYLS-GISVDVIANTLKTFKGVE 312
Query: 257 HRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEK 316
HR++ V +I GV + +DSK TN +A+ + LK V++ GG K G E + F K
Sbjct: 313 HRIEFVD-EINGVKFYNDSKGTNPDASIKAIQALK-PPIVLIAGGYDK---GSEFDEFVK 367
>gi|421863476|ref|ZP_16295173.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|309379066|emb|CBX22368.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 445
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 143/289 (49%), Gaps = 30/289 (10%)
Query: 23 QSGKRVMSELDFAAQVI-PRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
Q+G RV+ +++ A ++ R K++A+TG+NGK+TV + VG + G++ + GN+G P
Sbjct: 89 QNGGRVLGDIELLADIVNRRGDKVIAITGSNGKTTVTSLVGYLCIKCGLDTVIAGNIGTP 148
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
+ EA + K V V+E+SS+Q+E + PT + VLN++ DHL+R+ + +
Sbjct: 149 VLEAEWQ-----REGKKAGVWVLELSSFQLE-NTESLRPTAATVLNISEDHLDRYDDLLD 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLN------EAIKGHRFNLAWIGAFPGVKIDTEAK 195
YA TK +F G Q LN A+K + W E +
Sbjct: 203 YAHTKAKIFRGD----------GVQVLNADDVFCRAMKRAGREVKWFSLEHEADFWLERE 252
Query: 196 TASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTP 255
T + G + ++ + G H + A V A L +G+ EAL ++ +
Sbjct: 253 TGRLK---QGDEDLIATQDIPLQGLH--NAANVMAAVALCEAVGLPREALLEHVKTFQGL 307
Query: 256 PHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
PHR++ + + GV ++DDSK TN+ AT + L+ + ++LGG K
Sbjct: 308 PHRVEKIG-EKNGVVFIDDSKGTNVGATAAAIAGLQ-NPLFVILGGMGK 354
>gi|152979588|ref|YP_001345217.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
[Actinobacillus succinogenes 130Z]
gi|150841311|gb|ABR75282.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Actinobacillus
succinogenes 130Z]
Length = 437
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 147/304 (48%), Gaps = 34/304 (11%)
Query: 22 LQSGKRVMSELD-FAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
L +G V+ +++ F + ++ ++A+TG+NGKSTV T V +M G+ A +GGN+G
Sbjct: 86 LSAGIEVVGDIELFCREANIQAKPVVAITGSNGKSTVTTLVAEMAKADGLRAGMGGNIGI 145
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMK 140
P AL ++ + V+E+SS+Q+E + VLN+T DH+ R+ ++
Sbjct: 146 P---------ALSLLDAEYDLYVLELSSFQLETTFG-LRARAATVLNVTEDHMNRYADLE 195
Query: 141 NYALTKCHLFSH----MVNTKLGLLPFGNQHLNEAIK-GHRFNLAWIGAFPGVKIDTEAK 195
+Y K ++++ ++N + L Q G W+ G +
Sbjct: 196 DYRQAKLKIYANAETAVINAEDSLTQDNKQRAKRQFSFGESHADYWLKTENGKQ------ 249
Query: 196 TASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTP 255
+ + VV L +K+ GRHNY N A+A+++ L +GV + + +
Sbjct: 250 ---YLMAGREVV--LPCDEVKISGRHNYMN-ALASIA-LAQAVGVKTHGIRTALRTFTGL 302
Query: 256 PHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCV-ILLGGQAKVLNGQESNGF 314
HR Q+ H GV W++DSKATN+ +T L L + +LLGG K G + +
Sbjct: 303 DHRFQLAHL-ANGVRWINDSKATNVGSTVAALTGLYLEGNLHLLLGGDGK---GADFSEL 358
Query: 315 EKLI 318
EKL+
Sbjct: 359 EKLV 362
>gi|238916668|ref|YP_002930185.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Eubacterium
eligens ATCC 27750]
gi|259509787|sp|C4Z534.1|MURD_EUBE2 RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|238872028|gb|ACR71738.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Eubacterium
eligens ATCC 27750]
Length = 450
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 135/262 (51%), Gaps = 20/262 (7%)
Query: 44 KILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAV 103
KI+A+TGTNGK+T VGQ++ + FV GN+GN ++ L +S+ + VA
Sbjct: 109 KIIAITGTNGKTTTTALVGQIIAAYNEKTFVVGNIGN-----SYTGEVLKTSEDSYTVA- 162
Query: 104 VEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPF 163
E+SS+Q+E ++ F P VS +LN+TPDHL RH TM+ YA TK + + +L
Sbjct: 163 -EISSFQLETVHE-FHPIVSAILNITPDHLNRHHTMECYAWTKERISENQTKADTCVLNL 220
Query: 164 GNQHLNEAIKGHRFNLAWIGA--FPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRH 221
+++L + + N+ W + P V + + + L +H+M ++G+H
Sbjct: 221 EDKYLTDFAPECKANVVWFSSERKPSVGAYVDGEMIKY-TDGTNDYDMLNVHDMNLLGKH 279
Query: 222 NYHN--AAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATN 279
NY N AA+A G+ + +E ++ + HR++ V GV + +DSK TN
Sbjct: 280 NYENVCAAIAMTKAAGIPDDIIIE----QVKKFKAVEHRIEYVATK-NGVDYYNDSKGTN 334
Query: 280 LEATCTGLMDLKGHKCVILLGG 301
EA + + K IL+GG
Sbjct: 335 PEAAVKAIEAMV--KPTILIGG 354
>gi|400290796|ref|ZP_10792823.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
ratti FA-1 = DSM 20564]
gi|399921587|gb|EJN94404.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
ratti FA-1 = DSM 20564]
Length = 451
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 145/301 (48%), Gaps = 37/301 (12%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V++E++ A + I+ +TG+NGK+T T + +LNH G A + GN+G P SE A
Sbjct: 99 VITEVELAYLI--SEAPIIGITGSNGKTTTTTMIADVLNHAGQPALLSGNIGYPASEVAQ 156
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
++ V+E+SS+Q+ + + F P ++V+ NL P H++ H + +NY K
Sbjct: 157 SAVST-------DTLVMELSSFQL-MGTEKFHPQIAVITNLMPTHIDYHGSFENYVEAKW 208
Query: 148 HLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDT---EAKTASFEVPAV 204
++ +M+ +L F NQ L + + R N + K+D E F+ AV
Sbjct: 209 NIQKNMMAADTIILNF-NQELAKDLAA-RTNAKVVPFSTKEKVDGAYLEDGMLCFKGQAV 266
Query: 205 GVVSQLQLHNMKVMGRHNYHNA----AVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQ 260
++ + V G HN NA AVA LS GV A+ T+ HR+Q
Sbjct: 267 -----MKADELGVPGSHNIENALATIAVAKLS------GVSDGAIKETLAHFGGVKHRLQ 315
Query: 261 IVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLIEP 320
+ ++ GV + +DSK+TN+ AT L K +++ GG + N F+ LI
Sbjct: 316 YLG-EVSGVKFYNDSKSTNILATQKALSGFDNPKVILIAGGLDR------GNEFDDLIPD 368
Query: 321 L 321
L
Sbjct: 369 L 369
>gi|289578675|ref|YP_003477302.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Thermoanaerobacter
italicus Ab9]
gi|289528388|gb|ADD02740.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Thermoanaerobacter
italicus Ab9]
Length = 454
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 152/300 (50%), Gaps = 28/300 (9%)
Query: 23 QSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPL 82
Q V E++FA + I A+TGTNGK+T + +G+M + G + +V GN+G PL
Sbjct: 90 QKKIEVFGEVEFAYRF--SKAPIYAITGTNGKTTTTSLLGEMFKNTGRKVYVAGNIGYPL 147
Query: 83 SEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNY 142
A + +++ F VA E+SS+Q+E K F P +S ++N+TPDHL+RHKT +NY
Sbjct: 148 IYAV-----MEAAEDDFIVA--EISSFQLETI-KEFKPKISCIINITPDHLDRHKTFENY 199
Query: 143 ALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKID-----TEAKTA 197
K +F + + +L + ++ + + N A FP + K
Sbjct: 200 RDIKGRIFENQREDEYTVLNY-----DDPVTWNLKNKAKCRVFPFSRKSLLENGAYVKDG 254
Query: 198 SFEVPAVGVVSQ-LQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPP 256
S + G + + + + + G HN N A+AA SV L G+ + + +T++ +
Sbjct: 255 SIYISVYGNAEKIIDIEEIYIPGEHNLEN-ALAASSVAYLS-GISADVIANTLKTFKGVE 312
Query: 257 HRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEK 316
HR++ V +I GV + +DSK TN +A+ + LK V++ GG K G E + F K
Sbjct: 313 HRIEFVD-EINGVKFYNDSKGTNPDASIKAIQALK-TPIVLIAGGYDK---GSEFDEFVK 367
>gi|372268257|ref|ZP_09504305.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Alteromonas
sp. S89]
Length = 466
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 132/271 (48%), Gaps = 30/271 (11%)
Query: 44 KILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHC-IALPSSKPKFQVA 102
KI+A+TG+NGKSTV T +G+M++ G VGGN+G P+ + C LP V
Sbjct: 115 KIIAITGSNGKSTVTTLMGEMVSAAGFSVEVGGNIGVPVLDMLAQCGTNLP------DVF 168
Query: 103 VVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSH----MVNTKL 158
V+E+SS+Q+E P V+ +LN++ DH++R+ M Y K ++ H ++N
Sbjct: 169 VLELSSFQLET-TYSLAPDVATILNMSADHMDRYPNMAAYHQAKQRVYRHAQQLVINRAD 227
Query: 159 GLL--PFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMK 216
L P G + + R +L G + + + A G L+ M
Sbjct: 228 PLTRGPLGKDRVEWSFGLDRPDLRQFGVI---------RDGADQWLAQGTEKLLRTDAMA 278
Query: 217 VMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSK 276
++G HN NA A G +G+++ A+ + HR + V DI GV +V+DSK
Sbjct: 279 MVGSHNIANALAALAL--GYAVGMEMPAMLQVLRQFTGLTHRCERVG-DIDGVVFVNDSK 335
Query: 277 ATNLEAT---CTGLMDLKGHKCVILLGGQAK 304
TN+ AT GL D + K V++ GG K
Sbjct: 336 GTNVGATRAALDGLADDE-RKIVLIAGGDGK 365
>gi|427736837|ref|YP_007056381.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Rivularia sp. PCC
7116]
gi|427371878|gb|AFY55834.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Rivularia sp. PCC
7116]
Length = 469
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 153/311 (49%), Gaps = 41/311 (13%)
Query: 23 QSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPL 82
+ G + E++ A + + SI +AVTGTNGK+TV + +G + G+ A GN+G
Sbjct: 87 KKGIETVGEMELAWRNLG-SIPWVAVTGTNGKTTVTSLIGAIFQTAGLNAPTCGNIGLAA 145
Query: 83 SEAAFH--------CIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLE 134
+E A + PSS + + E+SSYQ+E + P + + LTPDHL
Sbjct: 146 TEIALEDKQRGQNSSPSSPSSPSNLEWIIAELSSYQIESSDS-LSPKIGIWTTLTPDHLA 204
Query: 135 RHKTMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNE------------AIKGHRFNLAWI 182
RHKT++NY K L +++ + N +L + +IKG L
Sbjct: 205 RHKTVENYYSIKARLLKR---SQMQVFNADNPYLRKVGETDWQDAYWTSIKGKDNLLTGK 261
Query: 183 GAF--PGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHN--AAVAALSVLGLDI 238
G + G ++T+ T++ E + VS L++ +G HN N +VAA +
Sbjct: 262 GFYIEDGWVVETQI-TSTSEDQKIMPVSALRM-----VGEHNLQNLLLSVAAARL----A 311
Query: 239 GVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVIL 298
G++ A++ I PHR++ + R I+G+ +++DSKATN +A GL +K +++
Sbjct: 312 GIEKSAIHQAISEFSGVPHRLEHI-RTIEGIDFINDSKATNYDAAEVGLASVK-SPAILI 369
Query: 299 LGGQAKVLNGQ 309
GG AK N +
Sbjct: 370 AGGAAKAGNDK 380
>gi|312867256|ref|ZP_07727466.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
parasanguinis F0405]
gi|311097385|gb|EFQ55619.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
parasanguinis F0405]
Length = 449
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 149/301 (49%), Gaps = 31/301 (10%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L+ G V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LEKGIPVLTEVELAYLI--SDAPIIGITGSNGKTTTTTMIGEVLTAAGQGGLLSGNIGFP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A + + V V+E+SS+Q+ + + F P ++V+ NL P H++ H + +N
Sbjct: 151 ASQVA-------QTATEKDVLVMELSSFQL-MGIEAFHPEIAVITNLMPTHIDYHGSFEN 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAI----KGHRFNLAWIGAFPGVKIDTEAKTA 197
Y K +L +M + +L F NQ L + + K + + G + E
Sbjct: 203 YVAAKWNLQKNMTEKDVIVLNF-NQDLAKELATKTKARVLPFSTVEKVDGAYL--EDGLL 259
Query: 198 SFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPH 257
F+ V ++ + V G HN N A+A ++V + GV+ E + T+ H
Sbjct: 260 KFKGEVV-----MRADELGVPGSHNVEN-ALATIAVAKVR-GVENEVIKETLSAFGGVKH 312
Query: 258 RMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKL 317
R+Q V +IQGV + +DSK+TN+ AT L K +++ GG + N F++L
Sbjct: 313 RLQYVD-EIQGVKFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------GNEFDEL 365
Query: 318 I 318
+
Sbjct: 366 V 366
>gi|337285808|ref|YP_004625281.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Thermodesulfatator
indicus DSM 15286]
gi|335358636|gb|AEH44317.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Thermodesulfatator
indicus DSM 15286]
Length = 463
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 97/280 (34%), Positives = 143/280 (51%), Gaps = 23/280 (8%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V+ EL+ + + KILA+TGTNGK+T +L G + FVGGN G PLSE
Sbjct: 97 VIGELELGYRFLLPGKKILAITGTNGKTTTTAMATDILRLSGKQVFVGGNYGTPLSEFII 156
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
+ K V+E SS+Q+E + F P V+V+LN+TPDHLER+ K YAL K
Sbjct: 157 NG-------QKADYLVLETSSFQLESIDT-FRPQVAVILNITPDHLERYAGFKEYALAKA 208
Query: 148 HLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVV 207
++ + +LP + L E + + + ++G G E K +SF +
Sbjct: 209 RIYENQTPEDFVILP---EELLEILPTPKSKMFFLGK-KGTN-GAELKGSSFVLHLPSGP 263
Query: 208 SQLQLHNMKVMGRHNYHNAAVAALSVLGLDI---GVDVEALNSTIEILRTPPHRMQIVHR 264
+ L K++G HN N VAAL+ L G+ EA+ S I PHR++ V
Sbjct: 264 EEYSLAGFKLLGEHNRLNFTVAALAARLLGATPQGIK-EAIKSFIGF----PHRLEFVG- 317
Query: 265 DIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
GV +V+DSKATN++AT L L ++++GG+ K
Sbjct: 318 TFGGVYFVNDSKATNVDATLKALRGLSA-PIILIMGGKHK 356
>gi|163785856|ref|ZP_02180325.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Hydrogenivirga sp.
128-5-R1-1]
gi|159878875|gb|EDP72910.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Hydrogenivirga sp.
128-5-R1-1]
Length = 316
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 145/274 (52%), Gaps = 29/274 (10%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V+ +++FA Q KI+A+TGT+GK+T + ++L + G +A++GGN G P
Sbjct: 67 VVGDIEFAYQFYKG--KIIAITGTDGKTTTTKLIYELLKNAGFDAYIGGNYGIPF----- 119
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
I + K VAV+E+SS+Q+ K F P ++++LN+ DHL+ HK K+Y L+K
Sbjct: 120 --IEITEEANKNSVAVLELSSFQL-YSTKKFRPDIALILNIDTDHLDWHKKRKHYVLSKF 176
Query: 148 HLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVV 207
+ + + +N++IK F A + ID E ++ + +
Sbjct: 177 KITKNQTENDYLI-------INKSIKETFFTKA-----RKLYIDLENHLNG-DILYIEDL 223
Query: 208 SQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQ 267
++ ++N+K+ GRHN N A ++ L + G++ + + T+E PHR++ V R I
Sbjct: 224 -KININNLKLKGRHNLENITFAVITALKM--GINPQIIKETVENFTPLPHRLEFV-RSIN 279
Query: 268 GVTWVDDSKATNLEATCTGLMDLKGHKCVILLGG 301
G+ + +DSK+T + AT L + K +IL+ G
Sbjct: 280 GINFYNDSKSTTVHATLKALDSFE--KDIILIAG 311
>gi|85707764|ref|ZP_01038830.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Erythrobacter sp.
NAP1]
gi|85689298|gb|EAQ29301.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Erythrobacter sp.
NAP1]
Length = 460
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 121/245 (49%), Gaps = 25/245 (10%)
Query: 44 KILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAV 103
K++ +TGTNGKST V V +L GI + +GGN+G P+ L + V V
Sbjct: 110 KVVGITGTNGKSTTVALVHHILQMAGIPSLLGGNIGEPIMAQE----PLAPGEGGEGVYV 165
Query: 104 VEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPF 163
+E+SSYQ+++ C V+ + N+TPDHL+R+ YA K LF L + F
Sbjct: 166 LELSSYQIDLTTSLDC-EVAALTNITPDHLDRYDGFAAYAAAKERLFKMQSPRNLAV--F 222
Query: 164 GNQHLNEAIKG-HRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHN 222
G+ L E + +R + + G + A+ A + + Q + + G HN
Sbjct: 223 GS--LEEPVGAIYRRQIEFRG-------EGRAQAADLD-----ALRDRQANWPSLQGPHN 268
Query: 223 YHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEA 282
N AVA V ++GV + I R PHRM+IV + +GV +++DSKATN +A
Sbjct: 269 LENVAVAVAIV--EELGVTEAQWSHAIPRFRGLPHRMEIVCEE-EGVLFINDSKATNTDA 325
Query: 283 TCTGL 287
+ L
Sbjct: 326 SAPAL 330
>gi|424592101|ref|ZP_18031525.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
CP1037(10)]
gi|408029846|gb|EKG66545.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
CP1037(10)]
Length = 440
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 98/324 (30%), Positives = 153/324 (47%), Gaps = 53/324 (16%)
Query: 2 WML-WLFLLEFQLKATGLAC-------LLQSGKRVMSELD-FAAQVIPRSIKILAVTGTN 52
W L WL + + G+A +L +G RV+ +++ FA V ++A+TG+N
Sbjct: 61 WNLEWLLNADLVVTNPGIALATPEIQQVLAAGIRVVGDIELFAWHV---DTPVIAITGSN 117
Query: 53 GKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQME 112
GKSTV G + N G++A VGGN+G P AL P ++ V+E+SS+Q+E
Sbjct: 118 GKSTVTDLSGVLANAAGVKAAVGGNIGVP---------ALDLISPDVELYVLELSSFQLE 168
Query: 113 IPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSH----MVNT-KLGLLPFGNQH 167
+ + LNL+ DH++R++ M++Y K +F H +VN P H
Sbjct: 169 TTSSLKL-KAAAFLNLSEDHMDRYQGMEDYRQAKLRIFDHAETAVVNADDTQTFPDHAAH 227
Query: 168 LNEAIKG----HRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNY 223
L G +F+LA + EA A E + ++GRHN
Sbjct: 228 LQVVTFGVEQAAQFSLAQHQGREYLFARDEAVMACAE--------------LSLVGRHNV 273
Query: 224 HN--AAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLE 281
N +A L G++ + ++AL S + HR Q+V D G+ WV+DSKATN+
Sbjct: 274 ANVLTVLALLDSAGVNFRLALDALKSYTGL----THRCQVV-ADNHGIKWVNDSKATNVA 328
Query: 282 ATCTGLMDLKGH-KCVILLGGQAK 304
+T L LK + +L+GG K
Sbjct: 329 STLAALSGLKIEGQLYLLVGGVGK 352
>gi|320157425|ref|YP_004189804.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio vulnificus
MO6-24/O]
gi|319932737|gb|ADV87601.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Vibrio vulnificus
MO6-24/O]
Length = 442
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 152/327 (46%), Gaps = 62/327 (18%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
+L G V+ +++ A + ++A+TG+NGKSTV G M N G++ +GGN+G
Sbjct: 88 VLARGVAVVGDIELFAWAADK--PVIAITGSNGKSTVTDLTGVMANACGVKCAIGGNIGV 145
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMK 140
P AL + + ++ V+E+SS+Q+E + + LNL+ DH++R++ M
Sbjct: 146 P---------ALDLLEQEVELYVLELSSFQLETTSSLHL-VAAAFLNLSEDHMDRYQGMD 195
Query: 141 NYALTKCHLFSH----MVNTK--------------LGLLPFGNQHLNEAIKGHRFNLAWI 182
+Y K +F H +VN L L+ FG+ + H+ +W+
Sbjct: 196 DYRQAKLRIFQHAKHGVVNRDDRQTYPETSHGQQLLALVTFGSDDKEFGVMSHQGE-SWL 254
Query: 183 GAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAV--AALSVLGLDIGV 240
+ + AS E +K++G+HN N V A L+ G+D
Sbjct: 255 ------SYNQQPILASRE--------------LKLVGQHNVANVLVVLALLTCAGIDYRK 294
Query: 241 DVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLK-GHKCVILL 299
+ AL S + HR Q+V D +G+ WV+DSKATNL +T L L K +L+
Sbjct: 295 GLSALKSYTGL----THRCQVV-ADNRGIKWVNDSKATNLASTQAALSGLNCAGKLYLLV 349
Query: 300 GGQAKVLNGQESNGFEKLIEPLNHHRC 326
GG K G + + + ++ LN C
Sbjct: 350 GGDGK---GADFSPLKPILAQLNLQLC 373
>gi|431807280|ref|YP_007234178.1| hypothetical protein BPP43_03085 [Brachyspira pilosicoli P43/6/78]
gi|430780639|gb|AGA65923.1| hypothetical protein BPP43_03085 [Brachyspira pilosicoli P43/6/78]
Length = 465
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 150/286 (52%), Gaps = 26/286 (9%)
Query: 27 RVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAA 86
+V+ E++FA +IP ++VTGT+GK+T V + +++ +A + GN+GN S+
Sbjct: 110 KVIGEIEFAYNLIPDR-NYISVTGTDGKTTTVNLIYSIISSYK-KARLLGNVGNTFSKEV 167
Query: 87 FHCIALPSSKPKFQVAVVEVSSYQME-IPNKYFCPTVSVVLNLTPDHLERHKTMKNYALT 145
S K + V+E+SS+Q+E I N F +SV+LN+ DHL+R+K +++Y
Sbjct: 168 -------ESIEKDEDIVLELSSFQLETIDN--FHSHISVILNIAEDHLDRYKDIEDYFNA 218
Query: 146 KCHLFSHMVNTKLGLLPFG----NQHLNEAIKGH--RFN-LAWIGAFPGVKIDTEAKTAS 198
K ++ + + +L + N++ NE IK FN L + + + +K
Sbjct: 219 KKNITKNQNSNDFLILNYDNFYTNRYYNELIKTKDISFNVLIFSTKYREANLYYNSKDEC 278
Query: 199 FEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHR 258
F + S + K++G HN N + L+ + +I +E ++ + ++ HR
Sbjct: 279 FYYNGEKIFS---IAKRKLLGMHNIENILASVLACIKDNIP--IEYIDKAVNNFKSIEHR 333
Query: 259 MQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
++ V ++I GV +++DSKAT++ A + L + ++++GG+ K
Sbjct: 334 LEFV-KEIDGVRYINDSKATSMSAVMSALKSFDKN-IILIMGGRNK 377
>gi|417917769|ref|ZP_12561328.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
parasanguinis SK236]
gi|342830406|gb|EGU64745.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
parasanguinis SK236]
Length = 449
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 149/301 (49%), Gaps = 31/301 (10%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L+ G V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LEKGIPVLTEVELAYLI--SDAPIIGITGSNGKTTTTTMIGEVLTAAGQGGLLSGNIGFP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A + + V V+E+SS+Q+ + + F P ++V+ NL P H++ H + +N
Sbjct: 151 ASQVA-------QTATEKDVLVMELSSFQL-MGIEAFHPEIAVITNLMPTHIDYHGSFEN 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAI----KGHRFNLAWIGAFPGVKIDTEAKTA 197
Y K +L +M + +L F NQ L + + K + + G + E
Sbjct: 203 YVAAKWNLQKNMTEKDVIVLNF-NQDLAKELATKTKARVLPFSTVEKVDGAYL--EDGLL 259
Query: 198 SFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPH 257
F+ V ++ + V G HN N A+A ++V + GV+ E + T+ H
Sbjct: 260 KFKGEVV-----MRADELGVPGSHNVEN-ALATIAVAKVR-GVENEVIKETLSAFGGVKH 312
Query: 258 RMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKL 317
R+Q V +IQGV + +DSK+TN+ AT L K +++ GG + N F++L
Sbjct: 313 RLQYVD-EIQGVKFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------GNEFDEL 365
Query: 318 I 318
+
Sbjct: 366 V 366
>gi|150390641|ref|YP_001320690.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Alkaliphilus
metalliredigens QYMF]
gi|167017285|sp|A6TS63.1|MURD_ALKMQ RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|149950503|gb|ABR49031.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Alkaliphilus
metalliredigens QYMF]
Length = 455
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 149/302 (49%), Gaps = 39/302 (12%)
Query: 12 QLKATGLACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIE 71
Q+KA G+ ++ E++ A + + R KI+A+TGTNGK+T G++ G
Sbjct: 89 QIKAQGI--------EIIGEVELAFR-LSRG-KIVAITGTNGKTTTTALTGEIFKGAGKN 138
Query: 72 AFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPD 131
+V GN+G P E A + V V+EVSS+Q+E K F P V +LNLTPD
Sbjct: 139 TYVVGNIGVPFIEKALDT-------TEEDVIVIEVSSFQLE-SIKEFHPKVGTLLNLTPD 190
Query: 132 HLERHKTMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEA--------IKGHRFNLAWIG 183
HL RHKT++NY K +LF + +L + + EA I R + G
Sbjct: 191 HLNRHKTIENYREAKLNLFMNQSLQDYAVLNYDDITSREAGKTLAAQKIYFSRKQILEEG 250
Query: 184 AFPGVKIDT-EAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDV 242
F ++ T + K ++V + + +K++G+HN NA A + + +GV
Sbjct: 251 VFVDNQLITIQTKEKRYDV--------IHIDEIKILGQHNLENALAA--TAMTFILGVSA 300
Query: 243 EALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQ 302
E + + HR++ V +I+GV +++DSK TN +A+ + + ++L GGQ
Sbjct: 301 EDIAKGLRNFPGVAHRLEFVE-EIEGVKYINDSKGTNTDASIKAIEAAQA-PIILLAGGQ 358
Query: 303 AK 304
K
Sbjct: 359 DK 360
>gi|429749513|ref|ZP_19282632.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Capnocytophaga
sp. oral taxon 332 str. F0381]
gi|429168050|gb|EKY09911.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Capnocytophaga
sp. oral taxon 332 str. F0381]
Length = 445
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 146/286 (51%), Gaps = 19/286 (6%)
Query: 23 QSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPL 82
+ G V+SE++FAAQ + I +A+TG+NGK+T +L G+ +GGN+G
Sbjct: 84 ERGIAVISEIEFAAQYTDKPI--IAITGSNGKTTTTMLTYHLLKEAGLSVGLGGNIGYSF 141
Query: 83 SEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK-TMKN 141
+E H S P + V +E+SS+Q++ +F P ++++LN+TPDHL+R+ +N
Sbjct: 142 AELVAH------SNPDYYV--LEISSFQLDGIATHFAPHIAMLLNITPDHLDRYNYQFEN 193
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEA---KTAS 198
Y +K + + + ++ + + ++ H+ A + F K E K
Sbjct: 194 YIASKFRIAMNQTANDYLIYDADDEVIADWLRHHKV-AAKLLPFTVKKEVAEGAYLKDNK 252
Query: 199 FEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHR 258
+ +++++ + + G HN N A ++ L V ++L +++ + HR
Sbjct: 253 IYMKIDEKTTEIEVDEISLKGIHNVKNTMAATIAARLL--AVRDQSLRQSLKGFKGADHR 310
Query: 259 MQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
++ V + + GVT+V+DSKATN+ + L +K V ++GGQ K
Sbjct: 311 LEEV-KVVDGVTYVNDSKATNVNSVFFALDTIKT-PIVWIVGGQDK 354
>gi|260767159|ref|ZP_05876102.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio furnissii
CIP 102972]
gi|260617833|gb|EEX43009.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio furnissii
CIP 102972]
Length = 439
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/292 (31%), Positives = 137/292 (46%), Gaps = 41/292 (14%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
++A+TG+NGKSTV G M N GI VGGN+G P A +A P+ ++ V+
Sbjct: 110 VIAITGSNGKSTVTDLTGVMANAAGIATAVGGNIGVP----ALDLLAQPA-----ELYVL 160
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSH----MVNTKLGL 160
E+SS+Q+E + + LNL+ DH++R+ M Y K +F H +VN
Sbjct: 161 ELSSFQLETTSS-LALKAAAFLNLSEDHMDRYDGMAGYRQAKLRIFEHAQTAVVNAD--- 216
Query: 161 LPFGNQHLNEAIKGH--RFNLAWIGAFPGVKID-TEAKTASFEVPAVGVVSQLQLHNMKV 217
Q +A G RF L F + D E A+ EV L ++ +
Sbjct: 217 ---DTQTYPDAYSGRTVRFGLEQPAEFTTAQHDGKEVLLANGEV-------VLPTSDLSL 266
Query: 218 MGRHNYHN--AAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDS 275
+GRHN N +A L G++ + AL S + HR Q+V D QG+ WV+DS
Sbjct: 267 VGRHNVANVLTVLALLDAAGVNYTNALPALKSYTGLT----HRCQVV-ADNQGIKWVNDS 321
Query: 276 KATNLEATCTGLMDLKGHKCVILL-GGQAKVLNGQESNGFEKLIEPLNHHRC 326
KATN+ +T L L + + LL GG K G + + ++E L C
Sbjct: 322 KATNVASTLAALSGLTLNGTLYLLVGGVGK---GADFTPLKPVLETLPLMLC 370
>gi|62900456|sp|Q5FUJ7.2|MURD_GLUOX RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
Length = 448
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 135/302 (44%), Gaps = 42/302 (13%)
Query: 25 GKRVMSELDFAAQVIPRS---IKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
G +++S+ + + + +S +AVTGTNGKST + + G GGNLG
Sbjct: 91 GIQILSDAEILYRAVRKSGSKAAFIAVTGTNGKSTTTALIAHLFTTAGRPCAAGGNLGT- 149
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
+ALP P V V+E+SSY +E +++ + +LNLTPDHL+RH M
Sbjct: 150 ------ASLALPL-LPDDGVYVIEMSSYMLERLDRFHA-NAACLLNLTPDHLDRHGDMAG 201
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEV 201
YA K H+F +M L ++ + W A I ++ + +V
Sbjct: 202 YAAAKAHVFDNMGPDDLAVIGMDDD--------------WCRA-----IASQVASRGVQV 242
Query: 202 PAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQI 261
+ + + GRHN N V A + +G+D A+ + ++ HR+Q
Sbjct: 243 VELDADALPPYDGPALPGRHNAQN--VGAALTIASHLGLDEAAIRTGLKSFPGLEHRLQK 300
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPL 321
V + GV++++DSKATN EA L K + + GG AK + G E L
Sbjct: 301 V-AECDGVSFINDSKATNAEAVSKALAAYD--KVMWIAGGVAK------AGGIESLAPFF 351
Query: 322 NH 323
H
Sbjct: 352 RH 353
>gi|71066594|ref|YP_265321.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Psychrobacter
arcticus 273-4]
gi|118595676|sp|Q4FQ21.1|MURD_PSYA2 RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|71039579|gb|AAZ19887.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Psychrobacter
arcticus 273-4]
Length = 476
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 137/281 (48%), Gaps = 44/281 (15%)
Query: 42 SIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQV 101
++ I+A+TG+N KSTV T VGQM GI VGGN+G P ++L S+ K ++
Sbjct: 114 TVPIVAITGSNAKSTVTTLVGQMAADAGINVGVGGNIGVP-------ALSLLSND-KMEL 165
Query: 102 AVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLF----SHMVNTK 157
AV+E+SS+Q+E V+ VLN++PDHL+RH M Y K +F S ++N +
Sbjct: 166 AVIELSSFQLETVTN-LGAQVATVLNMSPDHLDRHGDMLGYHQAKHRIFQGAKSVVINRE 224
Query: 158 LGL--------LPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQ 209
L LP + ++ KGH G+ D +T A G
Sbjct: 225 DALTRPLVSDSLPRLSTGIHAPNKGHY----------GLITDAAGQT----YLARGTERL 270
Query: 210 LQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGV 269
+ +K+ GRHN A LG G+ +E++ ST++ HR Q V I G+
Sbjct: 271 ISADKLKIKGRHN--LLNAQAALALGELAGLPLESMLSTLQQFAGLEHRCQYV-ATIAGI 327
Query: 270 TWVDDSKATNLEATCTGLMDL------KGHKCVILLGGQAK 304
+ +DSK TN+ +T + L K K +++LGGQ K
Sbjct: 328 DYFNDSKGTNIGSTMAAVEGLGAVYAPKDGKLLLILGGQGK 368
>gi|37678796|ref|NP_933405.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Vibrio
vulnificus YJ016]
gi|60390522|sp|Q7MNV3.1|MURD_VIBVY RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|37197537|dbj|BAC93376.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Vibrio vulnificus
YJ016]
Length = 442
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 151/327 (46%), Gaps = 62/327 (18%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
+L G V+ +++ A + ++A+TG+NGKSTV G M N G++ +GGN+G
Sbjct: 88 VLARGVAVVGDIELFAWAADK--PVIAITGSNGKSTVTDLTGVMANACGVKCAIGGNIGV 145
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMK 140
P AL + + ++ V+E+SS+Q+E + LNL+ DH++R++ M
Sbjct: 146 P---------ALDLLEQEVELYVLELSSFQLETTTSLHL-VAAAFLNLSEDHMDRYQGMD 195
Query: 141 NYALTKCHLFSH----MVN--------------TKLGLLPFGNQHLNEAIKGHRFNLAWI 182
+Y K +F H +VN L L+ FG+ + H+ +W+
Sbjct: 196 DYRQAKLRIFQHAKHGVVNRDDRQTYPETSHGQQSLALVTFGSDDKEFGVMSHQGE-SWL 254
Query: 183 GAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAV--AALSVLGLDIGV 240
+ + AS E +K++G+HN N V A L+ G+D
Sbjct: 255 ------SYNQQPILASRE--------------LKLVGQHNVANVLVVLALLTCAGIDYRK 294
Query: 241 DVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLK-GHKCVILL 299
+ AL S + HR Q+V D +G+ WV+DSKATNL +T L L K +L+
Sbjct: 295 GLSALKSYTGL----THRCQVV-ADNRGIKWVNDSKATNLASTQAALSGLNCAGKLYLLV 349
Query: 300 GGQAKVLNGQESNGFEKLIEPLNHHRC 326
GG K G + + + ++ LN C
Sbjct: 350 GGDGK---GADFSPLKPILAQLNLQLC 373
>gi|414343295|ref|YP_006984816.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Gluconobacter
oxydans H24]
gi|411028630|gb|AFW01885.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Gluconobacter
oxydans H24]
Length = 448
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 140/305 (45%), Gaps = 58/305 (19%)
Query: 25 GKRVMSELDFAAQVIPRS---IKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
G +++S+ + + + ++ + AVTGTNGKST + +L G+ GGNLG
Sbjct: 91 GIQILSDAELLYRAVRKAGSQARFAAVTGTNGKSTTTALLAHLLQSAGVPCAAGGNLGT- 149
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
+ALP P V V+E+SSY +E + + T + +LN+TPDHL+RH M
Sbjct: 150 ------ASLALPL-LPDQGVYVIEMSSYMLERLDSFHAST-ACLLNITPDHLDRHGDMDG 201
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEV 201
YA K H+F +M + +LA IG + D + + ++
Sbjct: 202 YAAAKAHVFDNMTSD---------------------DLAAIG-----QDDPWCQKIADDL 235
Query: 202 PAVGVVSQLQLHNM-------KVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRT 254
A GV L N + GRHN N VAA + +G++ +A+ +
Sbjct: 236 VARGVPVTLLNPNTVPEFVGDALPGRHNLQN--VAAAWAMARHLGLNDDAIRKGLASFPG 293
Query: 255 PPHRMQ-IVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNG 313
HR+Q I RD GV +V+DSKATN EA L + + + GG AK + G
Sbjct: 294 LEHRLQKIAERD--GVAFVNDSKATNAEAASKALGSYD--RVMWIAGGTAK------AGG 343
Query: 314 FEKLI 318
E L+
Sbjct: 344 IEMLV 348
>gi|241760241|ref|ZP_04758337.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Neisseria
flavescens SK114]
gi|241319352|gb|EER55817.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Neisseria
flavescens SK114]
Length = 445
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 143/289 (49%), Gaps = 30/289 (10%)
Query: 23 QSGKRVMSELDFAAQVI-PRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
Q+G RV+ +++ A ++ R K++A+TG+NGK+TV + VG + G++ + GN+G P
Sbjct: 89 QNGGRVLGDIELLADIVNRRGDKVIAITGSNGKTTVTSLVGYLCIKCGLDTVIAGNIGTP 148
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
+ EA L K V V+E+SS+Q+E + PT + VLN++ DHL+R+ + +
Sbjct: 149 VLEA-----ELQREGKKADVWVLELSSFQLE-NTESLRPTAATVLNISEDHLDRYDDLLD 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNE------AIKGHRFNLAWIGAFPGVKIDTEAK 195
YA TK +F G Q LN A+K + W E +
Sbjct: 203 YAHTKDKIFRGD----------GVQVLNADDVFCHAMKRAGREVKWFSLEHKADFWLERE 252
Query: 196 TASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTP 255
T + G + ++ + G H + A V A L +G+ EAL ++ +
Sbjct: 253 TGRLK---QGNEDLIATQDIPLQGLH--NAANVMAAVALCEAVGLPREALLEHVKTFQGL 307
Query: 256 PHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
PHR++ + + GV ++DDSK TN+ AT + L+ + ++LGG K
Sbjct: 308 PHRVEKIG-EKNGVVFIDDSKGTNVGATAAAIAGLQ-NPLFVILGGMGK 354
>gi|403379023|ref|ZP_10921080.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Paenibacillus
sp. JC66]
Length = 486
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 150/304 (49%), Gaps = 25/304 (8%)
Query: 25 GKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSE 84
G V++E++ A V+ R+ I+ +TG+NGK+T T+VG+ML G+ V GN+G PL++
Sbjct: 104 GIEVVTEVELA-YVVSRA-PIIGITGSNGKTTTTTWVGEMLEASGLRPIVAGNIGRPLAD 161
Query: 85 AAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYAL 144
AA K Q V E+SS+Q++ + F P ++ +LN++ HL+ H TMK+Y
Sbjct: 162 AAMQA-------EKDQWLVAELSSFQLK-GTQRFRPQIACLLNVSETHLDYHGTMKDYTA 213
Query: 145 TKCHLFSHMVNTKLGLLPFGN---QHLNEAIKGHRFNLAWIGAF-PGVKIDTEAKTASFE 200
+K LF++ + +L + + + L + + GV I A++ E
Sbjct: 214 SKFKLFANQCKEDIAVLNWDDGECRRLASQLTAKVLPFSTKEQLEEGVFIRRHAESGQLE 273
Query: 201 -----VPAVGVVSQ-LQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRT 254
PA G + L+ + V G N NA AA + GV + + ++ R
Sbjct: 274 RDIVYRPAGGDMRHILRASEVGVPGSFNLENALAAAAIA--IAAGVSLTVIAESLRQFRG 331
Query: 255 PPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGF 314
HR++ V + QGV ++SK+TN AT L + V+L+ G + +GF
Sbjct: 332 VEHRLEWVA-EHQGVLIYNNSKSTNATATIKALEGF--DRPVVLIAGGLDRQKDKPDSGF 388
Query: 315 EKLI 318
E+LI
Sbjct: 389 EELI 392
>gi|169824312|ref|YP_001691923.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Finegoldia magna
ATCC 29328]
gi|167831117|dbj|BAG08033.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Finegoldia magna
ATCC 29328]
Length = 441
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 142/278 (51%), Gaps = 13/278 (4%)
Query: 27 RVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAA 86
V+S+L+ A Q I IKI+A+TGTNGK+T + + +MLN G +A GN+G +
Sbjct: 83 EVVSDLELA-QRIFGDIKIVAITGTNGKTTTTSLMTKMLNDSGRKAISIGNIGVGMLWEI 141
Query: 87 FHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTK 146
++ S K + V+E SS+Q+E K F P S ++N+TPDH++ H +M+NY K
Sbjct: 142 YN-----SDKDTY--FVIECSSFQLE-STKNFKPQYSCIINITPDHIDWHGSMQNYVNAK 193
Query: 147 CHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGV 206
++ + +L +++ E K + N+ I VK + K S
Sbjct: 194 KNVLKNQDENCYTVLNADDEYYEECKKFTKANVYDISTSKNVKRGSFIKDNSIYFSDSDC 253
Query: 207 VSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDI 266
+ L ++K++G HNY N L IG++ +++ T+ HR++ V RD+
Sbjct: 254 DKIIDLKDVKLIGYHNYQNVLFCV--TLAKLIGINDDSIRETLMSFSGVEHRLEFV-RDL 310
Query: 267 QGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
GV + +DSK TN++A+ + + +IL GG K
Sbjct: 311 SGVKYYNDSKGTNVDASVKAIESFDKN-VIILAGGYDK 347
>gi|91205696|ref|YP_538051.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Rickettsia
bellii RML369-C]
gi|118595687|sp|Q1RI52.1|MURD_RICBR RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|91069240|gb|ABE04962.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Rickettsia bellii
RML369-C]
Length = 450
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 145/288 (50%), Gaps = 35/288 (12%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
+ S++D + + + +LAVTGTNGKST + +L+ G++ V GN+G P+ +A
Sbjct: 90 ITSDIDLFFEK-SKGLNLLAVTGTNGKSTTTALISHILSDNGLDYPVAGNIGVPVLQA-- 146
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
+SK + V+E+SS+Q+++ K F ++V+LN+TPDHL+RH+ M+ Y K
Sbjct: 147 -----KASKGGY---VLELSSFQLDLV-KTFAAKIAVLLNITPDHLDRHENMEGYITAKS 197
Query: 148 HLFSHMVNTKLGLLPFGNQHLNEA---------IKGHRFNLAWIGAFPGVKIDTEAKTAS 198
+F M G++ N + +E IK F++ I G+ I + T +
Sbjct: 198 KIFDRMDKDSYGIINIDNDYCHEIFTNLQQKHHIKLIPFSVTKILE-KGISIVNDIITDN 256
Query: 199 FEVPAVGVVSQLQLHNMKVMGRHNYHN--AAVAALSVLGLDIGVDVEALNSTIEILRTPP 256
F +S + N + G HN N A+ A ++GL+ +E+++S + P
Sbjct: 257 F----FEHISFKLISNKSLQGIHNSENIAASYAVARIIGLEPVKIIESISS----FQGLP 308
Query: 257 HRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
HRMQ + +I + + +DSKA+N A + L L GG AK
Sbjct: 309 HRMQYL-GNIDDINFYNDSKASNAIAAVQSIKALDN--IYWLAGGIAK 353
>gi|303233989|ref|ZP_07320638.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Finegoldia
magna BVS033A4]
gi|302494914|gb|EFL54671.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Finegoldia
magna BVS033A4]
Length = 441
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 143/278 (51%), Gaps = 13/278 (4%)
Query: 27 RVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAA 86
V+S+L+ A Q I IKI+A+TGTNGK+T + + +MLN G +A GN+G +
Sbjct: 83 EVVSDLELA-QRIFGDIKIVAITGTNGKTTTTSLMTKMLNDSGRKAISIGNIGVGMLWEI 141
Query: 87 FHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTK 146
++ S K + V+E SS+Q+E K+F P S ++N+TPDH++ H +MKNY K
Sbjct: 142 YN-----SDKDTY--FVIECSSFQLE-STKHFKPQYSCIINITPDHIDWHGSMKNYVNAK 193
Query: 147 CHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGV 206
++ + +L +++ E K + N+ I ++ + K S
Sbjct: 194 KNVLKNQDENCYTVLNADDEYYEECKKFTKANIYDISTSKNIERGSFIKDNSIYFSDSYC 253
Query: 207 VSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDI 266
+ L ++K++G HNY N L IG++ +++ T+ HR++ V RD+
Sbjct: 254 DKIIDLKDVKLIGYHNYQNVLFCV--TLAKLIGINDDSIRETLMSFSGVEHRLEFV-RDL 310
Query: 267 QGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
GV + +DSK TN++A+ + + +IL GG K
Sbjct: 311 SGVKYYNDSKGTNVDASVKAIESFDKN-VIILAGGYDK 347
>gi|337281545|ref|YP_004621016.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Streptococcus
parasanguinis ATCC 15912]
gi|335369138|gb|AEH55088.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Streptococcus
parasanguinis ATCC 15912]
Length = 449
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 150/301 (49%), Gaps = 31/301 (10%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L+ G V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LEKGIPVLTEVELAYLI--SDAPIIGITGSNGKTTTTTMIGEVLTAAGQGGLLSGNIGFP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A + + +V V+E+SS+Q+ + + F P ++V+ NL P H++ H + +N
Sbjct: 151 ASQVA-------QTATEKEVLVMELSSFQL-MGIEAFHPEIAVITNLMPTHIDYHGSFEN 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAI----KGHRFNLAWIGAFPGVKIDTEAKTA 197
Y K +L +M + +L F NQ L + + K + I G + E
Sbjct: 203 YVAAKWNLQKNMTEKDVIVLNF-NQDLAKELATKTKARVLPFSTIEKVDGAYL--EDGLL 259
Query: 198 SFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPH 257
F+ V ++ + V G HN N A+A ++V + V+ E + T+ H
Sbjct: 260 KFKGEVV-----MRADELGVPGSHNVEN-ALATIAVAKVR-SVENEVIKETLSAFGGVKH 312
Query: 258 RMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKL 317
R+Q V +IQGV + +DSK+TN+ AT L +K +++ GG + N F++L
Sbjct: 313 RLQYVD-EIQGVKFYNDSKSTNILATQKALSGFDNNKVILIAGGLDR------GNEFDEL 365
Query: 318 I 318
+
Sbjct: 366 V 366
>gi|315498851|ref|YP_004087655.1| UDP-N-acetylmuramoylalanine/d-glutamate ligase [Asticcacaulis
excentricus CB 48]
gi|315416863|gb|ADU13504.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Asticcacaulis
excentricus CB 48]
Length = 488
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/308 (29%), Positives = 139/308 (45%), Gaps = 52/308 (16%)
Query: 44 KILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAV 103
K +A+TGTNGKST +G +L G +A +GGN+G + LP + V
Sbjct: 137 KTVAITGTNGKSTTTALIGHILKAAGRDAHIGGNIG-------IGVLDLPEMHAG-TIYV 188
Query: 104 VEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPF 163
+E SSYQ+++ + F P V+V++N +PDHL+RH M Y K +F + + ++
Sbjct: 189 IETSSYQLDL-TQTFRPDVAVLMNFSPDHLDRHGDMDGYIKAKKRIFLNQTAHETAVIGT 247
Query: 164 GNQH----LNEAIKGHRFNLAWIG----------AFPGVKIDTEAKTASFEVPAVGVVSQ 209
++ + E H NL I A GV D A
Sbjct: 248 DDEWSQAVVTEMTAHHSVNLIPISSRRTLGRGVYALNGVIYDATTDRAR----------- 296
Query: 210 LQLHNMKVM----GRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRD 265
Q+ ++K + GRHN+ NA A + L G+ VE + + I HRMQ + R
Sbjct: 297 -QIIDLKTVRTLTGRHNWQNACAAYSACRAL--GLTVEVIVAGIRSFPGLDHRMQEIGR- 352
Query: 266 IQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLIE--PLNH 323
I+ V +++DSKATN +A + + GG+AK + G E+L + P
Sbjct: 353 IKNVRFINDSKATNADAARQAMSSYDSFYWIA--GGRAK------AGGIEELKDLFPRVK 404
Query: 324 HRCVITEC 331
H +I E
Sbjct: 405 HAYLIGEA 412
>gi|268604305|ref|ZP_06138472.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Neisseria
gonorrhoeae PID1]
gi|268588436|gb|EEZ53112.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Neisseria
gonorrhoeae PID1]
Length = 445
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 151/302 (50%), Gaps = 38/302 (12%)
Query: 14 KATGLACLLQSGKRVMSELDFAAQVI-PRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEA 72
+ + + Q+G RV+ +++ A ++ R K++A+TG+NGK+TV + VG + G++
Sbjct: 80 RQSDIEAFKQNGGRVLGDIELLADIVNRRGDKVIAITGSNGKTTVTSLVGYLCIKCGLDT 139
Query: 73 FVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDH 132
+ GN+G P+ EA L K V V+E+SS+Q+E + PT + V+N++ DH
Sbjct: 140 VIAGNIGTPVLEA-----ELQREGKKADVWVLELSSFQLE-NTESLRPTAATVMNISEDH 193
Query: 133 LERHKTMKNYALTKCHLFS----HMVNTKLGLLPFGNQHLNEAIKGHRFNLA-----WIG 183
L+R+ + +YA TK +F ++N + + +K RF+L W+
Sbjct: 194 LDRYDDLLDYAHTKAEIFRGDGVQVLNAD-DVFCRAMKRAGREVK--RFSLEHEADFWLE 250
Query: 184 AFPG-VKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDV 242
G +K E ++ ++P G+ ++ A V A L +G+
Sbjct: 251 RGTGCLKQGNEDLISTQDIPLQGL----------------HNAANVMAAVALCEAVGLPR 294
Query: 243 EALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQ 302
EAL ++ + PHR++ + + GV ++DDSK TN+ AT + L+ + ++LGG
Sbjct: 295 EALLEHVKTFQGLPHRVEKIG-EKNGVVFIDDSKGTNVGATAAAIAGLQ-NPLFVILGGM 352
Query: 303 AK 304
K
Sbjct: 353 GK 354
>gi|217979587|ref|YP_002363734.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Methylocella
silvestris BL2]
gi|217504963|gb|ACK52372.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Methylocella
silvestris BL2]
Length = 461
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 135/267 (50%), Gaps = 25/267 (9%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
++A+TGTNGKST + + LG + +GGN+G P+ + PSS+ +V VV
Sbjct: 116 LIAITGTNGKSTTTALIAHLFATLGFDVQIGGNIGTPI-----LALEPPSSE---RVHVV 167
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFG 164
E SSYQ+++ PTV V+LN+TPDHL+RH TM+NYA K L S + +G+
Sbjct: 168 ECSSYQIDLAPS-LDPTVGVLLNVTPDHLDRHGTMENYAAIKARLVSAADHAVIGVDDAF 226
Query: 165 NQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNM-------KV 217
+ + ++ ++ + A G+ E FE A+ +L + +
Sbjct: 227 CAAIAKKLRAEGHDVIGVSA-AGM---LEGDGVVFEGGALYWRGGRRLDLIADLSGVGSL 282
Query: 218 MGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKA 277
G HN NAA A+++VL IG+D L + HRM+ V + + + V+DSKA
Sbjct: 283 RGAHNGQNAA-ASVAVLHA-IGLDGAGLAKGLRSFAGLAHRMEEVGKYGKALL-VNDSKA 339
Query: 278 TNLEATCTGLMDLKGHKCVILLGGQAK 304
TN +A L+ +LGG+AK
Sbjct: 340 TNADAAEKALLSFD--NIFWILGGRAK 364
>gi|167043605|gb|ABZ08299.1| putative Mur ligase family, catalytic domain protein [uncultured
marine microorganism HF4000_APKG2M17]
Length = 455
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 155/317 (48%), Gaps = 33/317 (10%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L G + SE++ A+ I+A+TG+NGK+T +G + G FV GN+G P
Sbjct: 92 LSRGTSLYSEIEVASWFC--DAHIIAITGSNGKTTTTELLGHLFRKAGRNTFVCGNVGRP 149
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERH-KTMK 140
S+ + P + V+EVSS+Q++ + F P VS++LN+TPDHL+R+ + +
Sbjct: 150 FSDDT------DRTGPD-DLVVLEVSSFQLDHIDS-FRPDVSILLNITPDHLDRYNQDID 201
Query: 141 NYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGH-RFNLAWIGAFPGVKIDTEAKTASF 199
YA +K + + + ++ + ++ R +A G+ I E + F
Sbjct: 202 RYAASKLRICENQTGVDTFIFNQDDERIARFVRKRARGPIAL-----GISITEEIRATGF 256
Query: 200 EVPA---VGVVSQ----LQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEIL 252
+ + + Q + + + GRHN N+ AA++ ++ DV + ++
Sbjct: 257 LRNSDLMLRINDQEENLMPTEKLALRGRHNVFNSLAAAVAARVAEVRSDV--VRESLRSF 314
Query: 253 RTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESN 312
PHR++IV RDI GV +++DSKATN+ A L V++ GG+ K G + +
Sbjct: 315 EGVPHRLEIV-RDIDGVRYINDSKATNVNALWYALESFT-EPVVLIAGGRDK---GNDYS 369
Query: 313 GFEKLIEPLNHHRCVIT 329
G + L++ R +IT
Sbjct: 370 GLKSLVQ--TRVRALIT 384
>gi|429124553|ref|ZP_19185085.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Brachyspira
hampsonii 30446]
gi|426279564|gb|EKV56586.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Brachyspira
hampsonii 30446]
Length = 471
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 144/285 (50%), Gaps = 26/285 (9%)
Query: 27 RVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAA 86
+++ E++FA +P +AVTGT+GK+T VT V ++++ +A + GN+GN S+
Sbjct: 111 KIIGEIEFAYNFLPNR-NYIAVTGTDGKTTTVTLVHKIISSYK-KARLVGNVGNTFSKE- 167
Query: 87 FHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTK 146
+ + +P + V+E+SS+Q+E K F ++ VLN+ DHL+R+K + +Y TK
Sbjct: 168 -----IETIEPDEDI-VLELSSFQLETVEK-FHAHIAAVLNIAEDHLDRYKDIDDYFNTK 220
Query: 147 CHLFSHMVNTKLGLLPFGN-------QHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASF 199
++ + +L + N LN K + F + + E + +
Sbjct: 221 KNIAINQNKNDFLILNYDNIYTNIWYNELNNNCKMKLLTFSLKSKFADIYYNEEDEYIYY 280
Query: 200 EVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRM 259
E + + + K++G+HN N A L L I VD+ + T+ + HR+
Sbjct: 281 ENEKL-----FSIADRKLIGKHNIANILAAVLICLKDKIPVDI--IEKTVNNFKGIEHRV 333
Query: 260 QIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
++V +I GV +++DSKAT++ + + L ++++GG+ K
Sbjct: 334 ELV-AEINGVKYINDSKATSMNSVMSALKSF-DKDIILIMGGRNK 376
>gi|27364041|ref|NP_759569.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Vibrio
vulnificus CMCP6]
gi|30316015|sp|Q8DEK8.1|MURD_VIBVU RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|27360158|gb|AAO09096.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio vulnificus
CMCP6]
Length = 442
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 152/327 (46%), Gaps = 62/327 (18%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
+L G V+ +++ A + ++A+TG+NGKSTV G M N G++ +GGN+G
Sbjct: 88 VLARGVAVVGDIELFAWAADK--PVIAITGSNGKSTVTDLTGVMANACGVKCAIGGNIGV 145
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMK 140
P AL + + ++ V+E+SS+Q+E + + LNL+ DH++R++ M
Sbjct: 146 P---------ALDLLEQEVELYVLELSSFQLETTSSLHL-VAAAFLNLSEDHMDRYQGMD 195
Query: 141 NYALTKCHLFSH----MVN--------------TKLGLLPFGNQHLNEAIKGHRFNLAWI 182
+Y K +F H +VN L L+ FG+ + H+ +W+
Sbjct: 196 DYRQAKLRIFQHAKHGVVNRDDRQTYPETSHGQQSLALVTFGSDDKEFGVISHQGE-SWL 254
Query: 183 GAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAV--AALSVLGLDIGV 240
+ + AS E +K++G+HN N V A L+ G+D
Sbjct: 255 ------SYNQQPILASRE--------------LKLVGQHNVANVLVVLALLTCAGIDYRK 294
Query: 241 DVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLK-GHKCVILL 299
+ AL S + HR Q+V D +G+ WV+DSKATNL +T L L K +L+
Sbjct: 295 GLSALKSYTGL----THRCQVV-ADNRGIKWVNDSKATNLASTQAALSGLNCAGKLYLLV 349
Query: 300 GGQAKVLNGQESNGFEKLIEPLNHHRC 326
GG K G + + + ++ LN C
Sbjct: 350 GGDGK---GADFSPLKPILAQLNLQLC 373
>gi|58038641|ref|YP_190605.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Gluconobacter
oxydans 621H]
gi|58001055|gb|AAW59949.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Gluconobacter
oxydans 621H]
Length = 476
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 135/302 (44%), Gaps = 42/302 (13%)
Query: 25 GKRVMSELDFAAQVIPRS---IKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
G +++S+ + + + +S +AVTGTNGKST + + G GGNLG
Sbjct: 119 GIQILSDAEILYRAVRKSGSKAAFIAVTGTNGKSTTTALIAHLFTTAGRPCAAGGNLGT- 177
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
+ALP P V V+E+SSY +E +++ + +LNLTPDHL+RH M
Sbjct: 178 ------ASLALPL-LPDDGVYVIEMSSYMLERLDRFHA-NAACLLNLTPDHLDRHGDMAG 229
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEV 201
YA K H+F +M L ++ + W A I ++ + +V
Sbjct: 230 YAAAKAHVFDNMGPDDLAVIGMDDD--------------WCRA-----IASQVASRGVQV 270
Query: 202 PAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQI 261
+ + + GRHN N V A + +G+D A+ + ++ HR+Q
Sbjct: 271 VELDADALPPYDGPALPGRHNAQN--VGAALTIASHLGLDEAAIRTGLKSFPGLEHRLQK 328
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPL 321
V + GV++++DSKATN EA L K + + GG AK + G E L
Sbjct: 329 V-AECDGVSFINDSKATNAEAVSKALAAYD--KVMWIAGGVAK------AGGIESLAPFF 379
Query: 322 NH 323
H
Sbjct: 380 RH 381
>gi|399114889|emb|CCG17685.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Taylorella
equigenitalis 14/56]
Length = 478
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 143/303 (47%), Gaps = 27/303 (8%)
Query: 27 RVMSELDFAAQVI---PRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLS 83
+++SE+D + + + IKI+ +TGTNGK+TV + V M + G+++ GN +S
Sbjct: 102 KIISEIDLFYEAVKSNSKQIKIIGITGTNGKTTVTSMVRLMCEYAGLKSVEAGN----IS 157
Query: 84 EAAFHCIALPSSKPKF-QVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNY 142
+A + K + V +E+SS Q+ Y C S +LN+T DH++ H +M+ Y
Sbjct: 158 PSALTVVCEFEEKNSWPDVISLELSSAQL-FYTDYICLDASTILNITQDHIDWHGSMEAY 216
Query: 143 ALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTAS-FEV 201
+K +FSH + F L+ A L + + P K D K + +
Sbjct: 217 IASKKKIFSHSKIAAVDENQFKEFGLSNA-------LVYRDSLPINKEDIGIKEVNGMKW 269
Query: 202 PAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQI 261
+ + + MK+ G HN NA A +D+ E L + + HR
Sbjct: 270 FCTTDKNLMPVEAMKIRGNHNVLNAMAAMQLCRAIDLP--FEPLLTALRDYEAHNHRCTY 327
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPL 321
V RDIQGV ++DDSK TN+ AT + D V++LGG+ K GQ+ F L E L
Sbjct: 328 V-RDIQGVNFIDDSKGTNVGATVAAI-DGMYRNLVVILGGEGK---GQD---FTPLYESL 379
Query: 322 NHH 324
+
Sbjct: 380 RNR 382
>gi|268687189|ref|ZP_06154051.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Neisseria
gonorrhoeae SK-93-1035]
gi|268627473|gb|EEZ59873.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Neisseria
gonorrhoeae SK-93-1035]
Length = 445
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 148/293 (50%), Gaps = 38/293 (12%)
Query: 23 QSGKRVMSELDFAAQVI-PRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
Q+G RV+ +++ A ++ R K++A+TG+NGK+TV + VG + G++ + GN+G P
Sbjct: 89 QNGGRVLGDIELLADIVNRRGDKVIAITGSNGKTTVTSLVGYLCIKCGLDTVIAGNIGTP 148
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
+ EA L K V V+E+SS+Q+E + PT + V+N++ DHL+R+ + +
Sbjct: 149 VLEA-----ELQREGKKADVWVLELSSFQLE-NTESLRPTAATVMNISEDHLDRYDDLLD 202
Query: 142 YALTKCHLFS----HMVNTKLGLLPFGNQHLNEAIKGHRFNLA-----WIGAFPG-VKID 191
YA TK +F ++N + + +K RF+L W+ G +K
Sbjct: 203 YAHTKAEIFRGDGVQVLNAD-DVFCRAMKRAGREVK--RFSLEHEADFWLERGTGCLKQG 259
Query: 192 TEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEI 251
E ++ ++P G+ ++ A V A L +G+ EAL ++
Sbjct: 260 NEDLISTQDIPLQGL----------------HNAANVMAAVALCEAVGLPREALLEHVKT 303
Query: 252 LRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
+ PHR++ + + GV ++DDSK TN+ AT + L+ + ++LGG K
Sbjct: 304 FQGLPHRVEKIG-EKNGVVFIDDSKGTNVGATAAAIAGLQ-NPLFVILGGMGK 354
>gi|409196667|ref|ZP_11225330.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Marinilabilia
salmonicolor JCM 21150]
Length = 447
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 161/323 (49%), Gaps = 40/323 (12%)
Query: 18 LACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGN 77
+ L Q G V+SE++FA + + K++ VTG+NGK+T ++ ++ G+ + GN
Sbjct: 80 IKALHQQGIPVISEIEFAGRY--SNAKMVGVTGSNGKTTTAMWIFHLMKKSGLNVVLAGN 137
Query: 78 LGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK 137
+GN ++ L P + V+E+SS+Q++ + C T +++ N+TPDHL+R+
Sbjct: 138 VGNSMAR------ELLEKDP--DIFVLELSSFQLDGMKDFKCHT-AIITNITPDHLDRYD 188
Query: 138 -TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIK-----GHRFNLAWIGAF------ 185
+NY K + ++ N ++ + ++ + +K GHR A+ +
Sbjct: 189 YKFENYVDAKFRILNNHTNDEIFIFNAHDKEIMVRLKMMKYPGHRCPFAFDDVYGEGACV 248
Query: 186 PGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEAL 245
G K+ F +P V ++ + G+HN NA A+L+ L + G EA+
Sbjct: 249 DGEKVVFNTPRHHFSIPVV---------DIALPGKHNLSNAMAASLAALRM--GASEEAV 297
Query: 246 NSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKV 305
+ + HR++ V ++ GV +++DSKATN++++ L ++ + + GG K
Sbjct: 298 KEGLTDFPSVAHRLESV-AELNGVLYINDSKATNIDSSWYALESME-RPVIWIAGGTDK- 354
Query: 306 LNGQESNGFEKL-IEPLNHHRCV 327
G + + E+L I+ + H C+
Sbjct: 355 --GNDYSELEELAIQKVKHLICL 375
>gi|258546150|ref|ZP_05706384.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Cardiobacterium
hominis ATCC 15826]
gi|258518575|gb|EEV87434.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Cardiobacterium
hominis ATCC 15826]
Length = 436
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/237 (35%), Positives = 122/237 (51%), Gaps = 22/237 (9%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
+LAVTG+NGKSTVVT + Q LNH G +A + GN+G P+ +A F A V+
Sbjct: 104 VLAVTGSNGKSTVVTLLAQALNHAGHKAKLCGNIGRPVLDALFDGEAA-------DCYVI 156
Query: 105 EVSSYQMEI-PNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPF 163
E+SSYQ+E+ P+ Y P V+ VLN+TPDHL+R+ YA K +L + + +L
Sbjct: 157 ELSSYQLELCPSLY--PRVAAVLNVTPDHLDRYDDFAAYAAAKANLVRQ---SSICILN- 210
Query: 164 GNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNY 223
G+ A+ N+ + G + E A+ L+ +++ G HN+
Sbjct: 211 GDDEACVAMAEDGQNIIYYGTSATLPNRVEGGKIWLHGHAL-----LETARLRLGGAHNH 265
Query: 224 HNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNL 280
N L + GV + + S +E PHRMQ+V + GV W DDSKATN+
Sbjct: 266 ANILCTLLMLEA--YGVAPQQVLSALETFAGLPHRMQLVSEE-NGVRWYDDSKATNI 319
>gi|343503811|ref|ZP_08741617.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Vibrio
ichthyoenteri ATCC 700023]
gi|342813897|gb|EGU48854.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Vibrio
ichthyoenteri ATCC 700023]
Length = 438
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 164/339 (48%), Gaps = 51/339 (15%)
Query: 5 WLFLLEFQLKATGLAC-------LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTV 57
WL + + G+A ++ +G V+ +++ A + + ++A+TG+NGKSTV
Sbjct: 65 WLLEADLVVTNPGIALATPEIQQIIAAGIPVVGDIELFAWHVDK--PVIAITGSNGKSTV 122
Query: 58 VTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY 117
G + G VGGN+G P A P+ + V+E+SS+Q+E +
Sbjct: 123 TDMTGVVAKAAGWNVGVGGNIGVP----ALDLFEQPAD-----LYVLELSSFQLETTSS- 172
Query: 118 FCPTVSVV-LNLTPDHLERHKTMKNYALTKCHLFSH----MVNT-KLGLLPFGNQHLNEA 171
P V+ LNL+ DH++R++ M +Y K +F H +VN P +++L E
Sbjct: 173 -LPLVAAAFLNLSEDHMDRYQGMADYRQAKLRIFDHAKVCVVNADDKQTYPDTDKNLVE- 230
Query: 172 IKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNA--AVA 229
F+L + ++ D E A + L + + ++GRHN N+ +A
Sbjct: 231 -----FSLEQPSSASVIEQD------GVEFLAYNGEAILAVDELSLVGRHNVANSLVVIA 279
Query: 230 ALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGL-- 287
L+ G+D+ +EA+ S + HR Q+V D +G+ WV+DSKATN+ +T L
Sbjct: 280 LLNAAGVDVSAGLEAMKSYNGLT----HRCQVV-ADNRGIKWVNDSKATNVASTLAALSG 334
Query: 288 MDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPLNHHRC 326
++L G K +L+GG K G + + ++ PLN C
Sbjct: 335 LNLSG-KLFLLVGGNGK---GADFSDLAPVLAPLNVQLC 369
>gi|116071267|ref|ZP_01468536.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Synechococcus
sp. BL107]
gi|116066672|gb|EAU72429.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Synechococcus
sp. BL107]
Length = 462
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 135/298 (45%), Gaps = 31/298 (10%)
Query: 18 LACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGN 77
L L Q G +V E++ A + I + +TGTNGK+TV + +L G+ A +GGN
Sbjct: 86 LEILRQEGVQVRGEIELAWDAL-NDIPWVGITGTNGKTTVTHLLSHVLEQAGLRAPMGGN 144
Query: 78 LGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK 137
+G +E A +P + V+E+SSYQ+E P++ + LTPDHLERH
Sbjct: 145 MGVSAAEMALKIKTGDLLRPDW--LVMELSSYQIEA-GPTLAPSIGIWTTLTPDHLERHG 201
Query: 138 TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDT----- 192
T++ Y K L + L + + LN HR +L G+ + T
Sbjct: 202 TLEAYRAIKRGLLQR---SSLAIFNGDDADLN----AHRSSLK-----SGIWVQTATPCP 249
Query: 193 EAKTASFEVPAVGVVSQLQLHNM------KVMGRHNYHNAAVAALSVLGLDIGVDVEALN 246
+ + A F + G + + M + G HN N + ++ + IG++ E +
Sbjct: 250 DDQPADFWIDDAGTIQARESGAMFPADALAMPGAHNRQNQLL--VTAAAIQIGLNAEQIA 307
Query: 247 STIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
PHR++ + + +DSKATN +A GL + G V+L GGQ K
Sbjct: 308 QGFRSFPGVPHRLERLGSTASADVF-NDSKATNYDAAAVGLQAMAG-TVVVLAGGQTK 363
>gi|385810783|ref|YP_005847179.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Ignavibacterium
album JCM 16511]
gi|383802831|gb|AFH49911.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Ignavibacterium
album JCM 16511]
Length = 448
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 160/306 (52%), Gaps = 34/306 (11%)
Query: 23 QSGK-RVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
QS K +V+SEL+FA+ + I+ +TGTNGK+T + G + N G++ +V GN+G
Sbjct: 88 QSKKIKVISELEFASWFCKGT--IVGITGTNGKTTTTSLCGYLFNECGVKTYVAGNIGLA 145
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK-TMK 140
SE A + + +E+SS+Q+++ +K F P V+++LN+TPDHL R++ +++
Sbjct: 146 FSEIADQV-------KENEFVSLEISSFQLDLIDK-FNPKVAMILNITPDHLNRYENSVE 197
Query: 141 NYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGA----FPGVKIDTE--- 193
YAL+K ++ + + +L ++ LN+ I H+ W + G +DT
Sbjct: 198 KYALSKQRIYKNQTENEFLILNRDSELLNQYILQHKSKTFWYSTKEKVYDGCWLDTNRVV 257
Query: 194 -AKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEIL 252
++ + E ++++ + G HN NA ++ D E + + ++
Sbjct: 258 FSRNGNEEFSC-------NVNDILIRGEHNIQNAMAVIIAAKIFDF--KNEKIIAALKTF 308
Query: 253 RTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESN 312
R HR++ V ++I+G+ +++DSKATN+++ L ++LGG K G + +
Sbjct: 309 RGVEHRLEFV-KEIEGIKFINDSKATNIDSVIVALKSF-DEPIFLILGGLDK---GNDYS 363
Query: 313 GFEKLI 318
E+L+
Sbjct: 364 TIEELV 369
>gi|407793137|ref|ZP_11140172.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Idiomarina
xiamenensis 10-D-4]
gi|407215497|gb|EKE85336.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Idiomarina
xiamenensis 10-D-4]
Length = 451
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 144/289 (49%), Gaps = 34/289 (11%)
Query: 25 GKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSE 84
G ++ +++ AQ R ++A+TG+NGKSTV VG++L G A VGGN+G P
Sbjct: 98 GITLVGDIELYAQASQR--PVIAITGSNGKSTVTQLVGELLAAAGKRAAVGGNIGTP--- 152
Query: 85 AAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYAL 144
AL + V V+E+SS+Q+E P +V+LN++ DHL+R+ ++ +Y
Sbjct: 153 ------ALSLLDQQADVDVLELSSFQLE-STYSLRPDAAVILNISADHLDRYLSLADYIN 205
Query: 145 TKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDT------EAKTAS 198
K +F N K ++ + H K A + +F G + D E + +S
Sbjct: 206 AKQRIFQ---NAKHIVINRDDSHTRPLQKTQ----ASVSSF-GQQADKHGFCLREEQGSS 257
Query: 199 FEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHR 258
+ +G L+ ++ + G HN N +AA L + +DV ++ + + PHR
Sbjct: 258 W--LCLGSEKLLRSDDIALQGVHNLMN--IAAALALVQALAIDVHSVLDAVRVFPGLPHR 313
Query: 259 MQIVHRDIQGVTWVDDSKATNL---EATCTGLMDLKGHKCVILLGGQAK 304
Q++ + Q V WV+DSKATN+ EA GL L K V++ GG K
Sbjct: 314 CQLLKQQ-QQVAWVNDSKATNVGAAEAAIYGLRPLVAGKLVLIAGGDGK 361
>gi|127514383|ref|YP_001095580.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Shewanella
loihica PV-4]
gi|126639678|gb|ABO25321.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Shewanella loihica
PV-4]
Length = 443
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 135/277 (48%), Gaps = 32/277 (11%)
Query: 34 FAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALP 93
FA + R ++ +TG+NGKSTV T VG+M G++ VGGN+G P+ L
Sbjct: 100 FARALADRPACVIGITGSNGKSTVTTLVGEMAAKAGLKVAVGGNIGVPV---------LD 150
Query: 94 SSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHM 153
++ V+E+SS+Q+E + C + + LN++ DH++R+ +++Y K L+
Sbjct: 151 LLDGDHELFVLELSSFQLETTSSLNCISAT-CLNISEDHMDRYSDLESYRQAKLRLYDQ- 208
Query: 154 VNTKLGLLPFGNQHL----NEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQ 209
TKL + F L NE + + F L + P + + + V G
Sbjct: 209 --TKLAI--FNRDDLLTRPNEPMNQNSFGL----SLP----EGDEWGVNHGVLVHGTTEY 256
Query: 210 LQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGV 269
+ + ++G HN N VA L GVD A+ + + HR ++V + QGV
Sbjct: 257 VAGAQVSLVGSHNQANLLVAM--ALADSAGVDKAAMVEVAKQFKGLAHRCELVGKH-QGV 313
Query: 270 TWVDDSKATNLEATCTGLMDLKGHKCVILL--GGQAK 304
++V+DSKATN+ AT L L H+ I+L GG K
Sbjct: 314 SYVNDSKATNVGATIAALQGLSDHEGQIILIAGGDGK 350
>gi|59801871|ref|YP_208583.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Neisseria
gonorrhoeae FA 1090]
gi|293398488|ref|ZP_06642666.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Neisseria
gonorrhoeae F62]
gi|62900451|sp|Q5F6L6.1|MURD_NEIG1 RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|59718766|gb|AAW90171.1| putative UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
gonorrhoeae FA 1090]
gi|291610959|gb|EFF40056.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Neisseria
gonorrhoeae F62]
Length = 445
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 148/293 (50%), Gaps = 38/293 (12%)
Query: 23 QSGKRVMSELDFAAQVI-PRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
Q+G RV+ +++ A ++ R K++A+TG+NGK+TV + VG + G++ + GN+G P
Sbjct: 89 QNGGRVLGDIELLADIVNRRGDKVIAITGSNGKTTVTSLVGYLCIKCGLDTVIAGNIGTP 148
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
+ EA L K V V+E+SS+Q+E + PT + V+N++ DHL+R+ + +
Sbjct: 149 VLEA-----ELQREGKKADVWVLELSSFQLE-NTESLRPTAATVMNISEDHLDRYDDLLD 202
Query: 142 YALTKCHLFS----HMVNTKLGLLPFGNQHLNEAIKGHRFNLA-----WIGAFPG-VKID 191
YA TK +F ++N + + +K RF+L W+ G +K
Sbjct: 203 YAHTKAEIFRGDGVQVLNAD-DVFCRAMKRAGREVK--RFSLEHEADFWLERGTGCLKQG 259
Query: 192 TEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEI 251
E ++ ++P G+ ++ A V A L +G+ EAL ++
Sbjct: 260 NEDLISTQDIPLQGL----------------HNAANVMAAVALCEAVGLPREALLEHVKT 303
Query: 252 LRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
+ PHR++ + + GV ++DDSK TN+ AT + L+ + ++LGG K
Sbjct: 304 FQGLPHRVEKIG-EKNGVVFIDDSKGTNVGATAAAIAGLQ-NPLFVILGGMGK 354
>gi|78213668|ref|YP_382447.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Synechococcus
sp. CC9605]
gi|118595700|sp|Q3AHP0.1|MURD_SYNSC RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|78198127|gb|ABB35892.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Synechococcus sp.
CC9605]
Length = 461
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 142/296 (47%), Gaps = 28/296 (9%)
Query: 18 LACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGN 77
L L G +V E+D A + + I + +TGTNGK+TV + +L G+ A +GGN
Sbjct: 86 LVQLRSEGVQVRGEMDTAWDAL-QQIPWIGITGTNGKTTVTHLLSHVLEAAGLTAPMGGN 144
Query: 78 LGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK 137
+G LS A C +KP+ V+E+SSYQ+E P + + LTPDHLERH
Sbjct: 145 IG--LSAAELACQIGSGAKPRPDWLVMELSSYQIEAA-PAVAPKIGIWTTLTPDHLERHG 201
Query: 138 TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLA-WI---GAFPGVKIDTE 193
+++ Y K L ++ L + L + + +N W+ GA P +
Sbjct: 202 SLEAYRAIKRGLLER---SECALFNADDPDLRQ--QRSSWNRGTWVSSEGAHP------D 250
Query: 194 AKTASFEVPAVGVV--SQLQLHNMKVM---GRHNYHNAAVAALSVLGLDIGVDVEALNST 248
+ A + G+V + +L V+ GRHN N + ++ L+ G+ + +
Sbjct: 251 NQPADLWIDDEGMVRNNTTRLFAADVLAMPGRHNRQN--LLLVTAAALEAGLSPQQIADA 308
Query: 249 IEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
+ PHR++ + + G + +DSKATN +A GL ++G V+L GGQ K
Sbjct: 309 LRTFPGVPHRLEQLGT-LAGASVFNDSKATNYDAAEVGLRAVQG-PVVVLAGGQTK 362
>gi|302380550|ref|ZP_07269015.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Finegoldia
magna ACS-171-V-Col3]
gi|302311493|gb|EFK93509.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Finegoldia
magna ACS-171-V-Col3]
Length = 441
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 141/278 (50%), Gaps = 13/278 (4%)
Query: 27 RVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAA 86
V+S+L+ A Q I IKI+A+TGTNGK+T + + +MLN G +A GN+G +
Sbjct: 83 EVVSDLELA-QRIFGDIKIVAITGTNGKTTTTSLMTKMLNDSGRKAISIGNIGVGMLWEI 141
Query: 87 FHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTK 146
++ S K + V+E SS+Q+E K F P S ++N+TPDH++ H +M+NY K
Sbjct: 142 YN-----SDKDTY--FVIECSSFQLE-STKNFKPQYSCIINITPDHIDWHGSMQNYVNAK 193
Query: 147 CHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGV 206
++ + +L +++ E K + N+ I VK + K S
Sbjct: 194 KNVLKNQDENCYTVLNADDEYYEECKKFTKANVYDISTSKNVKRGSFIKDNSIYFSDSDC 253
Query: 207 VSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDI 266
+ L N+ ++G HNY N L IG++ +++ T+ HR++ V RD+
Sbjct: 254 DKIIDLKNVNLIGYHNYQNVLFCV--TLAKLIGINDDSIRETLMSFSGVEHRLEFV-RDL 310
Query: 267 QGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
GV + +DSK TN++A+ + + +IL GG K
Sbjct: 311 SGVKYYNDSKGTNVDASVKAIESFDKN-VIILAGGYDK 347
>gi|313667815|ref|YP_004048099.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
lactamica 020-06]
gi|313005277|emb|CBN86710.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
lactamica 020-06]
Length = 445
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 143/287 (49%), Gaps = 26/287 (9%)
Query: 23 QSGKRVMSELDFAAQVI-PRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
Q+G RV +++ A ++ R K++A+TG+NGK+TV + VG + G++ + GN+G P
Sbjct: 89 QNGGRVWGDIELLADIVNRRGDKVIAITGSNGKTTVTSLVGYLCIKCGLDTVIAGNIGTP 148
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
+ EA + + K V V+E+SS+Q+E + PT + VLN++ DHL+R+ + +
Sbjct: 149 VLEAEWQ-----RAGKKADVWVLELSSFQLE-NTESLRPTAATVLNISEDHLDRYDDLLD 202
Query: 142 YALTKCHLFS----HMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTA 197
YA TK +F ++N + A+K + W E +T
Sbjct: 203 YAHTKDKIFRGDGVQVLNA--------DDAFCRAMKRAGREVKWFSLEHEADFWLERETG 254
Query: 198 SFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPH 257
+ G + ++ + G H + A V A L +G+ EAL ++ + PH
Sbjct: 255 RLK---QGNEDLIATQDIPLQGLH--NAANVMAAVALCEAVGLPREALLEHVKTFQGLPH 309
Query: 258 RMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
R++ + + GV ++DDSK TN+ AT + L+ + ++LGG K
Sbjct: 310 RVEKIG-EKNGVVFIDDSKGTNVGATAAAIAGLQ-NPLFVILGGMGK 354
>gi|240014781|ref|ZP_04721694.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Neisseria
gonorrhoeae DGI18]
gi|240017229|ref|ZP_04723769.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Neisseria
gonorrhoeae FA6140]
gi|240121304|ref|ZP_04734266.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Neisseria
gonorrhoeae PID24-1]
gi|254494321|ref|ZP_05107492.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Neisseria
gonorrhoeae 1291]
gi|268597245|ref|ZP_06131412.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Neisseria
gonorrhoeae FA19]
gi|268682762|ref|ZP_06149624.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Neisseria
gonorrhoeae PID332]
gi|268684828|ref|ZP_06151690.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Neisseria
gonorrhoeae SK-92-679]
gi|226513361|gb|EEH62706.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Neisseria
gonorrhoeae 1291]
gi|268551033|gb|EEZ46052.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Neisseria
gonorrhoeae FA19]
gi|268623046|gb|EEZ55446.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Neisseria
gonorrhoeae PID332]
gi|268625112|gb|EEZ57512.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Neisseria
gonorrhoeae SK-92-679]
Length = 445
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 151/302 (50%), Gaps = 38/302 (12%)
Query: 14 KATGLACLLQSGKRVMSELDFAAQVI-PRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEA 72
+ + + Q+G RV+ +++ A ++ R K++A+TG+NGK+TV + VG + G++
Sbjct: 80 RQSDIEAFKQNGGRVLGDIELLADIVNRRGDKVIAITGSNGKTTVTSLVGYLCIKCGLDT 139
Query: 73 FVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDH 132
+ GN+G P+ EA L K V V+E+SS+Q+E + PT + V+N++ DH
Sbjct: 140 VIAGNIGTPVLEA-----ELQREGKKADVWVLELSSFQLE-NTESLRPTAATVMNISEDH 193
Query: 133 LERHKTMKNYALTKCHLFS----HMVNTKLGLLPFGNQHLNEAIKGHRFNLA-----WIG 183
L+R+ + +YA TK +F ++N + + +K RF+L W+
Sbjct: 194 LDRYDDLLDYAHTKAKIFRGDGVQVLNAD-DVFCRAMKRAGREVK--RFSLEHEADFWLE 250
Query: 184 AFPG-VKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDV 242
G +K E ++ ++P G+ ++ A V A L +G+
Sbjct: 251 RGTGCLKQGNEDLISTQDIPLQGL----------------HNAANVMAAVALCEAVGLPR 294
Query: 243 EALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQ 302
EAL ++ + PHR++ + + GV ++DDSK TN+ AT + L+ + ++LGG
Sbjct: 295 EALLEHVKTFQGLPHRVEKIG-EKNGVVFIDDSKGTNVGATAAAIAGLQ-NPLFVILGGM 352
Query: 303 AK 304
K
Sbjct: 353 GK 354
>gi|224541556|ref|ZP_03682095.1| hypothetical protein CATMIT_00726 [Catenibacterium mitsuokai DSM
15897]
gi|224525523|gb|EEF94628.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Catenibacterium
mitsuokai DSM 15897]
Length = 446
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 149/313 (47%), Gaps = 36/313 (11%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
L + G V +E++ +V + +AVTGTNGK+T VT + ++L G +A + GN G
Sbjct: 87 LKERGIPVYTEIELGYKVAKKQ-HYIAVTGTNGKTTTVTLIYEILKAAGRKAHICGNYGI 145
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMK 140
P E + VVE+S++Q+ I + F P V+ VLNLTPDHL+ ++
Sbjct: 146 PYCEVVLNEHLYEEEGHDI---VVEMSNFQL-IDIEEFKPEVATVLNLTPDHLDYMDSLD 201
Query: 141 NYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFE 200
Y +K ++ + L F N +E ++ +++ +P ++ +F
Sbjct: 202 EYYASKMRIYMNQDEKDL----FINNSDDETLQ------SYLAKYP-----VPSRIETFS 246
Query: 201 VPAVGVVS------------QLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNST 248
V G V + +K++G HN N VA + +GV +++++ T
Sbjct: 247 VKGQGDVELKDNAIYYKGQKVIDRDEIKIVGLHNVANMMVAIAACAS--VGVSLDSIHDT 304
Query: 249 IEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNG 308
+ + HR++ V R++ GV + +DSK TN +A + + ++L+GG K L+
Sbjct: 305 LAAFKGVEHRIEFV-RELDGVRYYNDSKGTNTDAAVIAIKAFE-KPVILLMGGHEKNLDL 362
Query: 309 QESNGFEKLIEPL 321
++ LI+ L
Sbjct: 363 KDVREQNPLIKTL 375
>gi|194099349|ref|YP_002002449.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Neisseria
gonorrhoeae NCCP11945]
gi|226722939|sp|B4RQC7.1|MURD_NEIG2 RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|193934639|gb|ACF30463.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
gonorrhoeae NCCP11945]
Length = 445
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 148/293 (50%), Gaps = 38/293 (12%)
Query: 23 QSGKRVMSELDFAAQVI-PRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
Q+G RV+ +++ A ++ R K++A+TG+NGK+TV + VG + G++ + GN+G P
Sbjct: 89 QNGGRVLGDIELLADIVNRRGDKVIAITGSNGKTTVTSLVGYLCIKCGLDTVIAGNIGTP 148
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
+ EA L K V V+E+SS+Q+E + PT + V+N++ DHL+R+ + +
Sbjct: 149 VLEA-----ELQREGKKADVWVLELSSFQLE-NTESLRPTAATVMNISEDHLDRYDDLLD 202
Query: 142 YALTKCHLFS----HMVNTKLGLLPFGNQHLNEAIKGHRFNLA-----WIGAFPG-VKID 191
YA TK +F ++N + + +K RF+L W+ G +K
Sbjct: 203 YAHTKAKIFRGDGVQVLNAD-DVFCRAMKRAGREVK--RFSLEHEADFWLERGTGCLKQG 259
Query: 192 TEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEI 251
E ++ ++P G+ ++ A V A L +G+ EAL ++
Sbjct: 260 NEDLISTQDIPLQGL----------------HNAANVMAAVALCEAVGLPREALLEHVKT 303
Query: 252 LRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
+ PHR++ + + GV ++DDSK TN+ AT + L+ + ++LGG K
Sbjct: 304 FQGLPHRVEKIG-EKNGVVFIDDSKGTNVGATAAAIAGLQ-NPLFVILGGMGK 354
>gi|333376752|ref|ZP_08468488.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Dysgonomonas mossii
DSM 22836]
gi|332885965|gb|EGK06209.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Dysgonomonas mossii
DSM 22836]
Length = 444
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 158/312 (50%), Gaps = 45/312 (14%)
Query: 23 QSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPL 82
+ G ++SE++FA + S K++ +TG+NGK+T + + +L G+ +GGN+G
Sbjct: 84 EKGIPILSEMEFAKRYT--SAKMICITGSNGKTTTTSLIYHILKSAGLNVGLGGNIG--- 138
Query: 83 SEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDHLERHK-TMK 140
A ++ F V+E+SS+Q+E N Y F ++++LN+TPDHL+R+ M+
Sbjct: 139 -----RSFARQVAEDNFDYYVLELSSFQLE--NMYSFKADIAILLNITPDHLDRYDHDMQ 191
Query: 141 NYALTKCHLFSHMVNTKLGLL----PFGNQHLNEAI-KGHRFNLA--WIG---AFP---G 187
Y K + + + P ++ + + + KG ++ A +G A+P
Sbjct: 192 KYVDAKMRIVQNQTEEDAFIFWEEDPIVSKEIQKLVSKGKQYTFADHKVGNAIAYPENNE 251
Query: 188 VKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNS 247
+KIDT P + + L + + G HN +N+ + ++ LDI E L
Sbjct: 252 IKIDT---------PKSIFIMKEDL--LALEGTHNLYNSLASGITAKLLDIT--DENLRH 298
Query: 248 TIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLN 307
++ + HR++ V R ++G+ +++DSKATN+ + L +K K V++LGG K
Sbjct: 299 SLSDFQGVEHRLEKVAR-VRGIQFINDSKATNVNSCWYALQSMK-TKVVLILGGTDK--- 353
Query: 308 GQESNGFEKLIE 319
G + E+L++
Sbjct: 354 GNDYTEIEQLVK 365
>gi|403745271|ref|ZP_10954209.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Alicyclobacillus
hesperidum URH17-3-68]
gi|403121499|gb|EJY55792.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Alicyclobacillus
hesperidum URH17-3-68]
Length = 453
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/295 (30%), Positives = 140/295 (47%), Gaps = 28/295 (9%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
L G + SE++ A+ R I A+TG+NGK+T T V +ML G FVGGN+G
Sbjct: 90 LAAKGVPIFSEIEVASWFTERPI--YAITGSNGKTTTTTLVSEMLRAAGRLPFVGGNIGT 147
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMK 140
P +EA + + +P V+EVSS+Q+ + F P + +LN P HL+ H T +
Sbjct: 148 PFAEA---VLEEQTDEP----VVLEVSSFQL-MGTWRFRPRGAALLNFYPAHLDYHGTFE 199
Query: 141 NYALTKCHLFSHM-------VNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTE 193
Y K +FS+M +N L+ G L + H F++ + GV ++ E
Sbjct: 200 AYQEAKWKMFSNMEQGDIAVLNADQDLVAGGASRLRADV--HYFSVDHVRFAFGVGVEDE 257
Query: 194 AKTASFEVPAVGVVSQ-LQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEIL 252
+ G V + L + + + GRHN N V A + L G EA+
Sbjct: 258 ----DIVIVERGEVRRLLPIAEVALPGRHNLQN--VVAAAALAQAAGASDEAIRQVAATF 311
Query: 253 RTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLN 307
+ HR++ V R++ GV + +DSKATN +A L H V + GG + L+
Sbjct: 312 QGVEHRLEFV-RELHGVRYYNDSKATNPDAARQALRSF-AHGIVWIAGGLDRGLS 364
>gi|239947262|ref|ZP_04699015.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Rickettsia
endosymbiont of Ixodes scapularis]
gi|239921538|gb|EER21562.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Rickettsia
endosymbiont of Ixodes scapularis]
Length = 453
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 121/248 (48%), Gaps = 31/248 (12%)
Query: 41 RSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQ 100
R + +AVTGTNGKST + +LN G++ V GN+G + +SK +
Sbjct: 102 RILNFIAVTGTNGKSTTTALISHILNSNGLDYPVAGNIG-------VSALRAKASKDGY- 153
Query: 101 VAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGL 160
V+E+SS+Q+++ K F ++V+LN+TPDHL+RH+ M Y K +F M +
Sbjct: 154 --VLELSSFQLDLV-KTFTAKIAVLLNITPDHLDRHQDMTGYIAAKSKIFDRMDKKSYAV 210
Query: 161 LPFGNQHLN---------EAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQ 211
+ N + + IK F++ I + +D + K +S
Sbjct: 211 INIDNDYCRKIFMLLQQEQRIKLIPFSVTKILENGILVVDDKIKDND--------ISYKL 262
Query: 212 LHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTW 271
N + G HNY N +AA + IGV+ + + +I ++ PHRMQ + I +++
Sbjct: 263 SFNKNLQGLHNYEN--IAASYAVAKIIGVEPKKIIESISSFQSLPHRMQYIGS-INNISF 319
Query: 272 VDDSKATN 279
+DSKATN
Sbjct: 320 YNDSKATN 327
>gi|261367771|ref|ZP_05980654.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Subdoligranulum
variabile DSM 15176]
gi|282570568|gb|EFB76103.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Subdoligranulum
variabile DSM 15176]
Length = 465
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/295 (30%), Positives = 141/295 (47%), Gaps = 29/295 (9%)
Query: 18 LACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGN 77
L L++G V SE++ + P +I+AVTG++GK+T T + +M+ G + F+GGN
Sbjct: 94 LQAALKAGAMVTSEVELFFEFCP--CEIIAVTGSDGKTTTTTLISKMMEAAGRKVFLGGN 151
Query: 78 LGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK 137
+G L L P+ VAVVE+SS+Q+ + P V+VV N+TP+HL+ HK
Sbjct: 152 IGAAL------LPQLADVTPE-AVAVVELSSFQLISMRR--SPKVAVVTNVTPNHLDHHK 202
Query: 138 TMKNYALTKCHLFSHMVNTKLGLLPFGNQ---HLNEAIKGH-----RFNLAWIGAFPGVK 189
M+ Y K ++ V +L + N+ + KG R + GAF +
Sbjct: 203 DMQEYIDAKRNILLWQVPPCRAVLGYENEISRSMQSDCKGEQVWFTRLHETDNGAFLRAE 262
Query: 190 IDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTI 249
DT + V V S+++L G HN N A +V G V VEA+
Sbjct: 263 DDTLCYAENGTVTPVVARSEVKLR-----GLHNVENLLAAIAAVWGR---VPVEAMRQVA 314
Query: 250 EILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
HR++ V R + GVT+ +DS A++ T GL K +++ GG K
Sbjct: 315 STFTGVEHRIEPV-RTLDGVTYYNDSIASSPTRTIAGLRSFD-QKIILIAGGYDK 367
>gi|302344984|ref|YP_003813337.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Prevotella
melaninogenica ATCC 25845]
gi|302150055|gb|ADK96317.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Prevotella
melaninogenica ATCC 25845]
Length = 443
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 157/306 (51%), Gaps = 30/306 (9%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
L+ G ++SE++FA + + K++ +TG+NGK+T + + + G +A + GN+GN
Sbjct: 82 LIAQGTHIISEIEFAGRYT--NSKMICITGSNGKTTTTSLIYHIFKDAGYDAGLAGNIGN 139
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDHLERHK-T 138
L AL ++ + ++E+SS+Q++ N Y F ++++LN+TPDHL+R+
Sbjct: 140 SL--------ALQVAEDPHEYYIIELSSFQLD--NMYDFRANIAILLNITPDHLDRYDYK 189
Query: 139 MKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTAS 198
+NYA K + + TK + N + +F++ + +P ++ +
Sbjct: 190 FENYADAKMRIIQNQ--TKEDSFIYWNDDPVIKKELEKFDVHAV-CYPFSELKEKGSIGY 246
Query: 199 FEVPAVGVVS----QLQLHNMKVMGRHNYHNAAVAALSVLGLDI-GVDVEALNSTIEILR 253
E + ++ ++ + GRHN +N+ A ++ DI G+ E + ++
Sbjct: 247 IEEGQYTIEQPEPFNMEQEDLSLTGRHNIYNSLAAGIAS---DISGIKKENIRKSLSDFP 303
Query: 254 TPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNG 313
HR++ V + + GV +++DSKATN++A L ++ ++++GG+ K G + N
Sbjct: 304 GVEHRLEKVCK-VAGVQYINDSKATNVDACWYALESMRT-PTILIIGGKDK---GNDYNS 358
Query: 314 FEKLIE 319
+ L++
Sbjct: 359 IKDLVK 364
>gi|262166446|ref|ZP_06034183.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio mimicus
VM223]
gi|262026162|gb|EEY44830.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio mimicus
VM223]
Length = 440
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 151/328 (46%), Gaps = 61/328 (18%)
Query: 2 WML-WLFLLEFQLKATGLAC-------LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNG 53
W L WL + + G+A +L +G V+ +++ A + + ++A+TG+NG
Sbjct: 61 WNLEWLLSADLVVTNPGIALATPEIQQVLATGIPVVGDIELFAWHVDK--PVIAITGSNG 118
Query: 54 KSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEI 113
KSTV G + N G++ VGGN+G P AL P+ ++ V+E+SS+Q+E
Sbjct: 119 KSTVTDLSGVLANAAGVKTAVGGNIGVP---------ALDLISPEVELYVLELSSFQLET 169
Query: 114 PNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIK 173
+ + LNL+ DH++R++ M++Y K +F H +
Sbjct: 170 TSSLKL-KAAAFLNLSEDHMDRYQGMEDYRQAKLRIFDHAETAVV--------------- 213
Query: 174 GHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQ--------------LQLHNMKVMG 219
N + FP + T E+PA V++ L + ++G
Sbjct: 214 ----NADDMQTFPDHAAHLQVVTFGVELPAQFSVAEHQGREYLFARDNAVLASSELSLVG 269
Query: 220 RHNYHN--AAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKA 277
RHN N +A L G+++ + ++AL S + HR Q+V D G+ WV+DSKA
Sbjct: 270 RHNVANVLTVLALLDSAGVNVRLALDALKSYTGLT----HRCQVV-ADNHGIKWVNDSKA 324
Query: 278 TNLEATCTGLMDLKGH-KCVILLGGQAK 304
TN+ +T L LK + +L+GG K
Sbjct: 325 TNVASTLAALSGLKIEGQLYLLVGGVGK 352
>gi|365877481|ref|ZP_09416985.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Elizabethkingia
anophelis Ag1]
gi|442587756|ref|ZP_21006571.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Elizabethkingia
anophelis R26]
gi|365754914|gb|EHM96849.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Elizabethkingia
anophelis Ag1]
gi|442562610|gb|ELR79830.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Elizabethkingia
anophelis R26]
Length = 459
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 154/309 (49%), Gaps = 22/309 (7%)
Query: 14 KATGLACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAF 73
KA + + Q G R+ SEL+FA KI+AVTG+NGK+T + + +L + G
Sbjct: 85 KAEIVGKIHQKGIRLSSELEFAYHFT--DAKIIAVTGSNGKTTTTSLIYHILKNDGYNVG 142
Query: 74 VGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQM-EIPNKYFCPTVSVVLNLTPDH 132
+GGN+G A + F V+EVSS+Q+ +I N F P +S++LNL+ DH
Sbjct: 143 LGGNIGKSF--------AYQVATEDFDYYVLEVSSFQLDDIQN--FRPYISLLLNLSQDH 192
Query: 133 LERHK-TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKID 191
L+++ + YAL K + + N + ++ + ++ N I K++
Sbjct: 193 LDQYNYNYEEYALAKFRIAENQENDNYFIYNKDDEMSQKILQSLEINATMIPFSLKEKLN 252
Query: 192 TEAKTASFE-VPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIE 250
+ E V + ++++ ++ ++G HN N+ A S+ G + + E++ +++
Sbjct: 253 EGGYSVDNELVVKLQEDFRMKISDLSLVGNHNVANSLAA--SIAGKLLNISNESIRNSLM 310
Query: 251 ILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQE 310
+ PHR++ V I V +++DSKATN+ A L +K + + ++GG K G +
Sbjct: 311 TFQAVPHRLEQVAV-INDVKYINDSKATNVNAAYYALESVK-YPAIWIVGGIDK---GND 365
Query: 311 SNGFEKLIE 319
E L++
Sbjct: 366 YTEIEDLVK 374
>gi|268595417|ref|ZP_06129584.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Neisseria
gonorrhoeae 35/02]
gi|268599420|ref|ZP_06133587.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Neisseria
gonorrhoeae MS11]
gi|268601974|ref|ZP_06136141.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Neisseria
gonorrhoeae PID18]
gi|291043152|ref|ZP_06568875.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Neisseria
gonorrhoeae DGI2]
gi|385336315|ref|YP_005890262.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Neisseria
gonorrhoeae TCDC-NG08107]
gi|268548806|gb|EEZ44224.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Neisseria
gonorrhoeae 35/02]
gi|268583551|gb|EEZ48227.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Neisseria
gonorrhoeae MS11]
gi|268586105|gb|EEZ50781.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Neisseria
gonorrhoeae PID18]
gi|291012758|gb|EFE04741.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Neisseria
gonorrhoeae DGI2]
gi|317164858|gb|ADV08399.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Neisseria
gonorrhoeae TCDC-NG08107]
Length = 445
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 148/293 (50%), Gaps = 38/293 (12%)
Query: 23 QSGKRVMSELDFAAQVI-PRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
Q+G RV+ +++ A ++ R K++A+TG+NGK+TV + VG + G++ + GN+G P
Sbjct: 89 QNGGRVLGDIELLADIVNRRGDKVIAITGSNGKTTVTSLVGYLCIKCGLDTVIAGNIGTP 148
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
+ EA L K V V+E+SS+Q+E + PT + V+N++ DHL+R+ + +
Sbjct: 149 VLEA-----ELQREGKKADVWVLELSSFQLE-NTESLRPTAATVMNISEDHLDRYDDLLD 202
Query: 142 YALTKCHLFS----HMVNTKLGLLPFGNQHLNEAIKGHRFNLA-----WIGAFPG-VKID 191
YA TK +F ++N + + +K RF+L W+ G +K
Sbjct: 203 YAHTKAKIFRGDGVQVLNAD-DVFCRAMKRAGREVK--RFSLEHEADFWLERGTGCLKQG 259
Query: 192 TEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEI 251
E ++ ++P G+ ++ A V A L +G+ EAL ++
Sbjct: 260 NEDLISTQDIPLQGL----------------HNAANVMAAVALCEAVGLPREALLEHVKT 303
Query: 252 LRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
+ PHR++ + + GV ++DDSK TN+ AT + L+ + ++LGG K
Sbjct: 304 FQGLPHRVEKIG-EKNGVVFIDDSKGTNVGATAAAIAGLQ-NPLFVILGGMGK 354
>gi|402703648|ref|ZP_10851627.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Rickettsia
helvetica C9P9]
Length = 467
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 121/243 (49%), Gaps = 21/243 (8%)
Query: 41 RSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQ 100
+++K +A+TGTNGKST + +LN G++ V GN+G P +A +SK +
Sbjct: 102 KNLKFIAITGTNGKSTTTALISHILNSNGLDYPVAGNIGVPALQA-------KASKDGY- 153
Query: 101 VAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGL 160
V+E+SS+Q+++ K F ++V+LN+TPDHL+R++ M Y K +F+ M +
Sbjct: 154 --VLELSSFQLDLV-KTFTAKIAVLLNITPDHLDRYQDMTGYIAAKSKIFNRMDKESYAV 210
Query: 161 LPFGNQHLNEAI----KGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMK 216
+ N + E + R L F KI + + +S N
Sbjct: 211 INIDNDYCREIFMLLQQEQRIKLI---PFSVTKILENGISVVDDKIKDNDISYKLSFNKN 267
Query: 217 VMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSK 276
+ G HN N +AA + IGV+ + + I ++ PHRMQ + I +++ +DSK
Sbjct: 268 LQGLHNCEN--IAASYAVAKIIGVEPKKILEYISSFQSLPHRMQYIGS-INNISFYNDSK 324
Query: 277 ATN 279
ATN
Sbjct: 325 ATN 327
>gi|336451749|ref|ZP_08622186.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Idiomarina sp.
A28L]
gi|336281562|gb|EGN74842.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Idiomarina sp.
A28L]
Length = 451
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 144/288 (50%), Gaps = 24/288 (8%)
Query: 23 QSGKRVMSELD-FAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
+G ++S+++ FA +V + ++ VTG+NGKSTVV +L GI A GN+G P
Sbjct: 92 DAGVEMISDIELFAWEV---EVPVVGVTGSNGKSTVVELTTHILRQCGINAVAAGNIGTP 148
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
+ ++ LP +K K V+E+SS+Q+E+ N T + +LN++ DHL+R+ +
Sbjct: 149 VLDS-----LLPGAK-KADCYVLELSSFQLELVNS-LQLTAATILNISSDHLDRYDDERG 201
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEV 201
Y K ++ H TKL + + + L G+ K D T E+
Sbjct: 202 YERAKHRIYQH---TKLCVWNRDDTKTKPLFRRQGMQLISFGSTDAAK-DFGITTVKDEL 257
Query: 202 PAVGVVSQ--LQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRM 259
A+ ++ ++ + + G HN N VA L +GV++ + + ++ PHR
Sbjct: 258 -ALTYANKPFIKESELPIQGTHNLLNVQVAV--ALAQALGVNLAEAVAGLAGYKSLPHRC 314
Query: 260 QIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGH---KCVILLGGQAK 304
++V + + V W+DDSKATN AT + ++ K +++ GG AK
Sbjct: 315 ELVG-EFEKVRWIDDSKATNPGATIAAIEGIRASAKGKLILIAGGDAK 361
>gi|319778486|ref|YP_004129399.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Taylorella
equigenitalis MCE9]
gi|317108510|gb|ADU91256.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Taylorella
equigenitalis MCE9]
Length = 478
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 143/303 (47%), Gaps = 27/303 (8%)
Query: 27 RVMSELDFAAQVI---PRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLS 83
+++SE+D + + + IKI+ +TGTNGK+TV + V M + G+++ GN +S
Sbjct: 102 KIISEIDLFYEAVKSNSKQIKIIGITGTNGKTTVTSMVRLMCEYAGLKSVEAGN----IS 157
Query: 84 EAAFHCIALPSSKPKF-QVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNY 142
+A + K + V +E+SS Q+ Y C S +LN+T DH++ H +M+ Y
Sbjct: 158 PSALTVVCEFEEKNSWPDVISLELSSAQL-FYTDYICLDASTILNITQDHIDWHGSMEAY 216
Query: 143 ALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTAS-FEV 201
+K +FSH + F L+ A L + + P K D K + +
Sbjct: 217 IASKKKIFSHSKIAVVDENQFKEFGLSNA-------LVYRDSLPINKEDIGIKEVNGMKW 269
Query: 202 PAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQI 261
+ + + MK+ G HN NA A +D+ E L + + HR
Sbjct: 270 FCTTDKNLMPVEAMKIRGNHNVLNAMAAMQLCRAIDLP--FEPLLTALRDYEAHNHRCTY 327
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPL 321
V RDIQGV ++DDSK TN+ AT + D V++LGG+ K GQ+ F L E L
Sbjct: 328 V-RDIQGVNFIDDSKGTNVGATVAAI-DGMYRNLVVILGGEGK---GQD---FTPLYESL 379
Query: 322 NHH 324
+
Sbjct: 380 RNR 382
>gi|78042912|ref|YP_360890.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
[Carboxydothermus hydrogenoformans Z-2901]
gi|122063239|sp|Q3AAE4.1|MURD_CARHZ RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|77995027|gb|ABB13926.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Carboxydothermus
hydrogenoformans Z-2901]
Length = 451
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 151/304 (49%), Gaps = 17/304 (5%)
Query: 2 WMLWLFLLEFQLKATGLACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFV 61
W L + L +A L+ G V+ E++ A + + I+AVTGTNGK+T +++
Sbjct: 69 WELLVVSPGVPLTEEPIAYSLKEGIPVLGEIELAYKEL--KAPIIAVTGTNGKTTTTSWI 126
Query: 62 GQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPT 121
G++L G + + GN+G PL EA + ++ +EVSS+Q+E K F P
Sbjct: 127 GEVLKIAGFKTLIAGNIGYPLIEAV---------EEEWDAVSLEVSSFQLETI-KSFKPK 176
Query: 122 VSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAW 181
V+V+LNLTPDHL+RHKT++ Y K +F + T + +L + + + + + +
Sbjct: 177 VAVLLNLTPDHLDRHKTLEGYLEAKARIFINQDRTDVTVLNYDDPRIRSLGRKTPGRVFY 236
Query: 182 IGAFPGVKIDTEAKTASFEVPAVGVVSQ-LQLHNMKVMGRHNYHNAAVAALSVLGLDIGV 240
++ K V ++GV + + + N+ + G HN NA + GV
Sbjct: 237 FSQKEELEEGVFVKKGKIVVRSLGVEEEIIDIENLPLPGPHNLENALATVAACWSF--GV 294
Query: 241 DVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLG 300
+ + + + HR++ V +I GV +V+DSK TN ++T L + V++ G
Sbjct: 295 SGKNIERGLRNFQGVAHRLEKVA-EINGVLYVNDSKGTNPDSTIKALNSYE-RPIVLIAG 352
Query: 301 GQAK 304
G+ K
Sbjct: 353 GRNK 356
>gi|397662261|ref|YP_006502961.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Taylorella
equigenitalis ATCC 35865]
gi|394350440|gb|AFN36354.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Taylorella
equigenitalis ATCC 35865]
Length = 478
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 143/303 (47%), Gaps = 27/303 (8%)
Query: 27 RVMSELDFAAQVI---PRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLS 83
+++SE+D + + + IKI+ +TGTNGK+TV + V M + G+++ GN +S
Sbjct: 102 KIISEIDLFYEAVKSNSKQIKIIGITGTNGKTTVTSMVRLMCEYAGLKSVEAGN----IS 157
Query: 84 EAAFHCIALPSSKPKF-QVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNY 142
+A + K + V +E+SS Q+ Y C S +LN+T DH++ H +M+ Y
Sbjct: 158 PSALTVVCEFEEKNSWPDVISLELSSAQL-FYTDYICLDASTILNITQDHIDWHGSMEAY 216
Query: 143 ALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTAS-FEV 201
+K +FSH + F L+ A L + + P K D K + +
Sbjct: 217 IASKKKIFSHSKIAVVDENQFKEFGLSNA-------LVYRDSLPINKEDIGIKEVNGMKW 269
Query: 202 PAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQI 261
+ + + MK+ G HN NA A +D+ E L + + HR
Sbjct: 270 FCTTDKNLMPVEAMKIRGNHNVLNAMAAMQLCRAIDLP--FEPLLTALRDYEAHNHRCTY 327
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPL 321
V RDIQGV ++DDSK TN+ AT + D V++LGG+ K GQ+ F L E L
Sbjct: 328 V-RDIQGVNFIDDSKGTNVGATVAAI-DGMYRNLVVILGGEGK---GQD---FTPLYESL 379
Query: 322 NHH 324
+
Sbjct: 380 RNR 382
>gi|419781108|ref|ZP_14306940.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
oralis SK100]
gi|383184500|gb|EIC77014.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
oralis SK100]
Length = 450
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 146/297 (49%), Gaps = 23/297 (7%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L G V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LAKGIPVLTEVELAYLI--SEAPIIGITGSNGKTTTTTMIGEVLTAAGQRGLLSGNIGYP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A A + V+E+SS+Q+ + + F P ++V+ NL P H++ H + +
Sbjct: 151 ASQVAQTATAKDT-------LVMELSSFQL-MGVQEFHPEIAVITNLMPTHIDYHGSFEE 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEV 201
Y K ++ + M +L F NQ L + + A + F +K A A ++
Sbjct: 203 YVAAKWNIQNKMTADDFLVLNF-NQDLAKELATK--TQATVVPFSTLKKVDGAYLADGQL 259
Query: 202 PAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQI 261
G V + + V G HN N A+A ++V L GVD + + T+ HR+Q
Sbjct: 260 YFRGEVV-MAASEIGVPGSHNVEN-ALATIAVAKLR-GVDNQTIKETLSAFGGVKHRLQF 316
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
V +IQGV + +DSK+TN+ AT L K +++ GG + N F++L+
Sbjct: 317 VD-EIQGVKFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------GNEFDELV 366
>gi|406903257|gb|EKD45396.1| hypothetical protein ACD_69C00313G0003 [uncultured bacterium]
Length = 445
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 144/299 (48%), Gaps = 33/299 (11%)
Query: 13 LKATGLACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEA 72
L +A L+ G V+ +++ A+ I I A+TG+NGKSTV + VG ML G +
Sbjct: 80 LSEPAIAACLKRGIEVVGDIELFARAT--KIPIAAITGSNGKSTVTSIVGAMLKAAGRKV 137
Query: 73 FVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDH 132
VGGNLG P AL + + V+E+SS+Q+E N P +VVLN++PDH
Sbjct: 138 GVGGNLGKP---------ALDLLDEEAEFYVLELSSFQLETTNS-LQPAAAVVLNISPDH 187
Query: 133 LERHKTMKNYALTKCHLF----SHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGV 188
++R++ + Y K ++ + ++N + L + N L + + + +G F G+
Sbjct: 188 MDRYRDLTEYLAAKQRIYFGCRAAIIN-RDDPLSYANVVLPQKVISFGIDKPSVGNF-GI 245
Query: 189 KIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNST 248
S G L + ++K+ GRH + A A LG I + A+
Sbjct: 246 ---------SNGYLMYGDKKLLFMDDLKIKGRH--NAANALAALALGTAINLPFSAMLQA 294
Query: 249 IEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDL---KGHKCVILLGGQAK 304
+ PHR Q V + + V W +DSK TN+ AT + L L + K +++ GG AK
Sbjct: 295 LLDFPGLPHRCQWVAK-VGDVDWYNDSKGTNVGATKSALEGLGAQRESKIILIAGGIAK 352
>gi|374851961|dbj|BAL54906.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [uncultured
candidate division OP1 bacterium]
gi|374857189|dbj|BAL60042.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [uncultured
candidate division OP1 bacterium]
Length = 438
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/285 (31%), Positives = 132/285 (46%), Gaps = 45/285 (15%)
Query: 25 GKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSE 84
G V EL+ A ++ P S KI+A+TGTNGKST ++L G GN+G PL
Sbjct: 93 GIPVWGELELAYRLCP-SEKIIAITGTNGKSTTTRLSEELLRRAGCPVIAAGNIGTPL-- 149
Query: 85 AAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYAL 144
IA + VVEVSS+Q+E + F P V+V+LN+ P+HL+RH + Y
Sbjct: 150 -----IARVREITPETIVVVEVSSFQLEAIER-FRPAVAVLLNVAPNHLDRHGSFAAYLS 203
Query: 145 TKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAV 204
KC +F + L +LP G L ++ L + F
Sbjct: 204 LKCRVFENQTERDLLVLPRG---LPLPVQPRSRVLYYDELF------------------- 241
Query: 205 GVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTP--PHRMQIV 262
L+L +++V RH +AA A + + T EILR PHR + +
Sbjct: 242 -----LELAHLRV-PRHLQEDAAAAWAACRAFVPSMP----PPTEEILRAVQLPHRQEFI 291
Query: 263 HRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLN 307
+I GV + DDSKAT + AT L G V++LGG+ K ++
Sbjct: 292 A-EINGVKFYDDSKATTVHATLAALDAFAG-PLVLILGGRNKKID 334
>gi|423686943|ref|ZP_17661751.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Vibrio
fischeri SR5]
gi|371493702|gb|EHN69302.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Vibrio
fischeri SR5]
Length = 440
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 151/294 (51%), Gaps = 44/294 (14%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
+ G +++ +++ A + + ++A+TG+NGKSTV G+M G++ VGGN+G
Sbjct: 89 IDKGIQIVGDIELFAWAV--NAPVIAITGSNGKSTVTDLTGEMAKAAGVKTAVGGNIG-- 144
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
AL + ++ V+E+SS+Q+E + + LNL+ DH++R++ M +
Sbjct: 145 -------FAALDLLEQDAELYVLELSSFQLETTSTLKLK-AAAFLNLSEDHMDRYQGMAD 196
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQH----LNEAIKGHRFNLAWIGAFPGVKIDTEAKTA 197
Y K +F H ++ ++ ++ + + +K F+ G I+ AK A
Sbjct: 197 YRQAKLRIFDH---AEVCIVNRDDKQTYPDVEKTLKSFGFDQGDYGCIEKDGIEYLAKDA 253
Query: 198 SFEVPAVGVVSQLQLHNMKVMGRHNYHNA--AVAALSVLGLDIGVDVEALNSTIEILRTP 255
+S L + + ++G+HN N+ A+A L +G++ L++T++ LRT
Sbjct: 254 ---------MSLLAANELGLVGKHNIANSLVAIALLDAVGIN-------LDATLDTLRTY 297
Query: 256 ---PHRMQIVHRDIQGVTWVDDSKATNLEATCTGL--MDLKGHKCVILLGGQAK 304
HR Q+V D G+ WV+DSKATN+ +T L + L+G K +L+GG K
Sbjct: 298 NGLTHRCQVV-ADNNGIRWVNDSKATNVASTLAALSGLQLEG-KLHLLVGGVGK 349
>gi|192359523|ref|YP_001983387.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Cellvibrio
japonicus Ueda107]
gi|190685688|gb|ACE83366.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Cellvibrio
japonicus Ueda107]
Length = 455
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 136/290 (46%), Gaps = 33/290 (11%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
++A+TG+N KSTV T VG+M GI+ VGGNLG P AL + ++ V+
Sbjct: 118 MVAITGSNAKSTVTTLVGEMAKAAGIQVAVGGNLGTP---------ALELLRDDIELYVM 168
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLF---SHMVNTKLGLL 161
E+SS+Q+E NK V+ +LN++ DHL+R+ M+ Y L K ++ ++V + +L
Sbjct: 169 ELSSFQLETVNK-LNAKVATILNISADHLDRYPDMRAYILAKLRIYFGAENIVVNRNDIL 227
Query: 162 PFGNQHLNEAIKGHRF-NLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGR 220
+ L K F A GAF + D E A P L +K+ GR
Sbjct: 228 T--HPPLAVGAKPVYFGGRADFGAFGLLDRDGEEYLAKNLTPL------LPARELKIRGR 279
Query: 221 HNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNL 280
HN NA A I + A+ + R HR + V I GV + +DSK TN+
Sbjct: 280 HNIDNALAALALGDAAGI--PMAAMLGALREFRGLRHRCEYVA-SIDGVEFYNDSKGTNI 336
Query: 281 EATCTGLMDLKG--HKCVILLGGQAKVLNGQESNGFEKLIEPLNHHRCVI 328
AT + L + ++ GG K GQ+ F +L L RCV+
Sbjct: 337 GATLAAINGLARVPSRLFVIAGGDGK---GQD---FTELTASLVASRCVL 380
>gi|322374681|ref|ZP_08049195.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
sp. C300]
gi|321280181|gb|EFX57220.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
sp. C300]
Length = 450
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 146/300 (48%), Gaps = 29/300 (9%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L G +V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LAKGIQVLTEVELAYLI--SDAPIIGITGSNGKTTTTTMIGEVLTAAGQHGLLSGNIGYP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A A + V+E+SS+Q+ + + F P ++V+ NL P H++ H + +
Sbjct: 151 ASQVAQTATAKDT-------LVMELSSFQL-MGVQEFHPEIAVITNLMPTHIDYHGSFEE 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDT---EAKTAS 198
Y K ++ + M +L F NQ L + + + + K+D E
Sbjct: 203 YVAAKWNIQNKMTAADFLVLNF-NQDLAKEL-ASKTQATVVPFSTQEKVDGAYLEDGQLC 260
Query: 199 FEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHR 258
F V S++ V G HN N A+AA++V L GVD + + T+ HR
Sbjct: 261 FRGEVVMAASEI-----GVPGSHNVEN-ALAAIAVAKLR-GVDNQTIKETLSAFGGVKHR 313
Query: 259 MQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
+Q V +IQGV + +DSK+TN+ AT L K +++ GG + N F++L+
Sbjct: 314 LQFVD-EIQGVKFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------GNEFDELV 366
>gi|421860348|ref|ZP_16292479.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Paenibacillus
popilliae ATCC 14706]
gi|410830096|dbj|GAC42916.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Paenibacillus
popilliae ATCC 14706]
Length = 476
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 140/297 (47%), Gaps = 34/297 (11%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L G V++E++ A + S I+ +TG+NGK+T T+VG ML G+ V GN+G P
Sbjct: 93 LALGIEVVTEVEVAYHL--SSAPIIGITGSNGKTTTTTWVGNMLEAAGLRPIVAGNIGTP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
L +AA A +V + E+SS+Q++ F P V+ +LN++ HL+ H TM++
Sbjct: 151 LCQAAGEAGA-------DKVLLAELSSFQLK-GTSAFRPRVASLLNISNTHLDYHVTMED 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEV 201
Y +K LF +M N + +L + + W+ + V+ + E
Sbjct: 203 YVQSKARLFRNMANGDVAVLNADDATCRVLAPDIGARIWWVSSTQRVECGVYVEPPYPEA 262
Query: 202 PAVGVVSQLQL---------------HNMKVMGRHNYHNA-AVAALSVLGLDIGVDVEAL 245
G QL + V GR+N NA A A+S+ G + L
Sbjct: 263 SGEGEEDDRQLVYADEAGQLHPIIGVREIGVPGRYNVDNALAAVAISIAA---GAEPAVL 319
Query: 246 NSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKC-VILLGG 301
+ R HR++ V ++ G ++ ++SKATN +AT LM L+ + V+L+ G
Sbjct: 320 ADPLRSFRGVEHRLEYVG-EVNGASYYNNSKATNTKAT---LMALEAFEAPVVLIAG 372
>gi|197334972|ref|YP_002156999.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Vibrio
fischeri MJ11]
gi|226722954|sp|B5FB37.1|MURD_VIBFM RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|197316462|gb|ACH65909.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio fischeri
MJ11]
Length = 440
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 151/294 (51%), Gaps = 44/294 (14%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
+ G +++ +++ A + + ++A+TG+NGKSTV G+M G++ VGGN+G
Sbjct: 89 IDKGIQIVGDIELFAWAV--NAPVIAITGSNGKSTVTDLTGEMAKAAGVKTAVGGNIG-- 144
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
AL + ++ V+E+SS+Q+E + + LNL+ DH++R++ M +
Sbjct: 145 -------FAALDLLEQDAELYVLELSSFQLETTSTLKLK-AAAFLNLSEDHMDRYQGMAD 196
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQH----LNEAIKGHRFNLAWIGAFPGVKIDTEAKTA 197
Y K +F H ++ ++ ++ + + +K F+ G I+ AK A
Sbjct: 197 YRQAKLRIFDH---AEVCIVNRDDKQTYPDVEKTLKSFGFDQGDYGCIEKDGIEYLAKDA 253
Query: 198 SFEVPAVGVVSQLQLHNMKVMGRHNYHNA--AVAALSVLGLDIGVDVEALNSTIEILRTP 255
+S L + + ++G+HN N+ A+A L +G++ L++T++ LRT
Sbjct: 254 ---------MSLLAANELGLVGKHNIANSLVAIALLDAVGIN-------LDATLDTLRTY 297
Query: 256 ---PHRMQIVHRDIQGVTWVDDSKATNLEATCTGL--MDLKGHKCVILLGGQAK 304
HR Q+V D G+ WV+DSKATN+ +T L + L+G K +L+GG K
Sbjct: 298 NGLTHRCQVV-ADNNGIRWVNDSKATNVASTLAALSGLQLEG-KLHLLVGGVGK 349
>gi|405354263|ref|ZP_11023643.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Chondromyces
apiculatus DSM 436]
gi|397092506|gb|EJJ23264.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Myxococcus sp.
(contaminant ex DSM 436)]
Length = 455
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 91/289 (31%), Positives = 137/289 (47%), Gaps = 24/289 (8%)
Query: 24 SGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLS 83
+G V E++ A +++ S+ + +TGTNGKST G + + G FVGGNLG P S
Sbjct: 93 AGVAVWGEVELAGRLL-SSVPLFGITGTNGKSTTTALTGTLFSTGGKRTFVGGNLGRPFS 151
Query: 84 EAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYA 143
EAA + + VVE+SSYQ+E + P + +LNLTPDH++R+ + Y
Sbjct: 152 EAAM-------APEDWDALVVELSSYQLE-GIRALRPRGAAILNLTPDHIDRYPSHAAYG 203
Query: 144 LTKCHLFSHMVNTKLGLLPFGNQH---LNEAIKGHRFNLAWIGA----FPGVKIDTEAKT 196
K +F ++ + L A K + + G P + A+
Sbjct: 204 EAKARIFQSQQAGDFAVVNADDADVLGLARAAKAPVYGFSLTGTPVADAPKLAGLAVAEP 263
Query: 197 ASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSV-LGLDIGVDVEALNSTIEILRTP 255
F + +G L N + G HN NA AAL LG GV A+ + ++
Sbjct: 264 GGFRLAFLG--EHYTLTNRALRGAHNAQNAMAAALLARLG---GVASGAVQAGLDGYPGL 318
Query: 256 PHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
PHR++ V R + GV WV+DSKATN+++ L G +I GG+ K
Sbjct: 319 PHRLESV-RMLDGVEWVNDSKATNVDSVLVALRAFAGGVWLI-AGGKGK 365
>gi|338737182|ref|YP_004674144.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Hyphomicrobium sp.
MC1]
gi|337757745|emb|CCB63568.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Hyphomicrobium sp.
MC1]
Length = 471
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 140/281 (49%), Gaps = 35/281 (12%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
+ +TGTNGKST + +L H G++ +GGN+G P+ + L +P + VV
Sbjct: 116 FIGITGTNGKSTTTALISHILRHAGLDVQMGGNIGRPI-------LTLEPPEPG-RFHVV 167
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFG 164
E+SS+Q+++ PTV V+LN+TPDHL+RH ++++YA K L +G+
Sbjct: 168 ELSSFQIDL-TPTLGPTVGVMLNVTPDHLDRHGSIEHYAEIKERLVLGADIAAVGI---- 222
Query: 165 NQHLNEAIKGHRFNLAWIGAF-------PGVKIDTEAKTAS-FEVPAVGVVSQLQLHNMK 216
+ A+ R N+ + AF PG + + S E AV + S + ++
Sbjct: 223 DDDFGLAMLRRRINVGPVVAFSAEKSIAPGYSLLGDTIVCSNREGLAVKLGSLTGVPTLR 282
Query: 217 VMGRHNYHN--AAVAA----LSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVT 270
G+HN N AAVAA LS LG +D + S+ L PHRM+ + R I V
Sbjct: 283 --GKHNGQNALAAVAAVRECLSALGRTTDLDWQGALSSFPGL---PHRMEEIGR-IGKVL 336
Query: 271 WVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQES 311
+++DSKATN ++T L + GG+ K G ES
Sbjct: 337 FINDSKATNADSTEKALQSFP-RDVYWIAGGKPKA-GGIES 375
>gi|266624107|ref|ZP_06117042.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase, partial
[Clostridium hathewayi DSM 13479]
gi|288864069|gb|EFC96367.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Clostridium
hathewayi DSM 13479]
Length = 355
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 136/263 (51%), Gaps = 21/263 (7%)
Query: 44 KILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAV 103
K+ A+TGTNGK+T + VG++L+ E FV GN+G P + AL ++ + VA
Sbjct: 107 KLAAITGTNGKTTTTSLVGEILSAYYKEVFVVGNIGTP-----YTSTALRTTDQSYTVA- 160
Query: 104 VEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPF 163
E+SS+Q+E F P VS +LN+TPDHL RHKTM Y K + + +L +
Sbjct: 161 -EISSFQLETITD-FRPDVSAILNITPDHLNRHKTMDCYINVKERIAENQTKEDACILNY 218
Query: 164 GN---QHLNEAIKGHRFNLAWIGAFP-GVKIDTEAKTASFEVPAVGVVSQ-LQLHNMKVM 218
+ + E I + P G+ +D + + + GV + + +H+M ++
Sbjct: 219 DDPVLRRFGETIAPRVIYFSSRELLPEGICLDGDMIIRNHD----GVRMEIINIHDMNLL 274
Query: 219 GRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKAT 278
GRHN+ N V A + + +++GV +E + S I + HR++ V GV + +DSK T
Sbjct: 275 GRHNHEN--VMAAAAIAMELGVPLETIQSVIRDFKAVEHRIEFVAEK-AGVKYYNDSKGT 331
Query: 279 NLEATCTGLMDLKGHKCVILLGG 301
N +A + + G +++ GG
Sbjct: 332 NPDAAIQAVNAMPG-PTILIAGG 353
>gi|406983107|gb|EKE04355.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [uncultured
bacterium]
Length = 453
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 88/293 (30%), Positives = 147/293 (50%), Gaps = 21/293 (7%)
Query: 42 SIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQV 101
S+ +A+TGTNGK+T V ++L + G A GN+G P+ I+L KP
Sbjct: 110 SVPFIAITGTNGKTTTTKLVSEILTNAGYNAPACGNIGLPV-------ISL-VEKPDIDY 161
Query: 102 AVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLL 161
V EVSSYQ+E N+ F P +++ LN TPDH++ H + + Y K LF+ + +L
Sbjct: 162 FVAEVSSYQIET-NQVFKPQIALFLNYTPDHIDWHGSEEAYFEAKAGLFTDHRSPIWAIL 220
Query: 162 PFGNQHLNEAIKGHRFNLAWIG-AFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGR 220
+ + E N+ + G PG + + F + +++ ++ ++G+
Sbjct: 221 NACDPKICELRHKSLSNVVYFGREMPGPSVYMK-DNKIFAKSKNKIEKIIEVEDISLIGK 279
Query: 221 HNYHN--AAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKAT 278
HNY N AA+A SV + V+ + + TI+ + P HR++ V I G+++ +DSKAT
Sbjct: 280 HNYQNIMAAIAIASV----VQVESDTIRETIKNFKAPEHRLEYVTA-IGGISYYNDSKAT 334
Query: 279 NLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPLNHHRCVITEC 331
N ++T L K V++ GG+ K G + N + I+ H +I E
Sbjct: 335 NCDSTICALKAFNDDKVVLIAGGRDK---GTDLNELVETIKKQAAHVVLIGEA 384
>gi|265764983|ref|ZP_06093258.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides sp.
2_1_16]
gi|263254367|gb|EEZ25801.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides sp.
2_1_16]
Length = 444
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 152/309 (49%), Gaps = 38/309 (12%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
L + G ++SE++FA + K++ +TG+NGK+T + + + G+ + GN+G
Sbjct: 82 LREQGTPIISEIEFAGRYT--DAKMICITGSNGKTTTTSLIYHIFKSAGLNVGLAGNIGK 139
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDHLERHK-T 138
L AL ++ K V+E+SS+Q++ N Y F ++V++N+TPDHL+R+
Sbjct: 140 SL--------ALQVAEEKHDYYVIELSSFQLD--NMYNFRADIAVLMNITPDHLDRYDHC 189
Query: 139 MKNYALTKCHLFSHMVNTKLGLL----PFGNQHLNE-AIKGHRFNLAWIGAFPGVKIDTE 193
M+NY K + + + + P + L++ I+ H +P I E
Sbjct: 190 MQNYINAKFRITQNQTSEDAFIFWNDDPIIKRELDKHGIRAH--------LYPFSAIKEE 241
Query: 194 AKTASFEVPAVGVVS----QLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTI 249
A E V + ++ + + G+HN +N+ A +S L G+ E + +
Sbjct: 242 GSIAYVEDHEVVITEPIAFNMEQEQLALTGQHNLYNSLAAGISA-NL-AGITKEDIRKAL 299
Query: 250 EILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQ 309
+ HR++ V R ++G+ +++DSKATN+ + L + K V++LGG+ K G
Sbjct: 300 SDFQGVEHRLEKVAR-VRGIDFINDSKATNVNSCWYALQSMTT-KTVLILGGKDK---GN 354
Query: 310 ESNGFEKLI 318
+ E+L+
Sbjct: 355 DYTEIEELV 363
>gi|154498031|ref|ZP_02036409.1| hypothetical protein BACCAP_02011 [Bacteroides capillosus ATCC
29799]
gi|150273021|gb|EDN00178.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
[Pseudoflavonifractor capillosus ATCC 29799]
Length = 461
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 139/290 (47%), Gaps = 17/290 (5%)
Query: 16 TGLACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVG 75
T L + G + SE++ QV P +I+AVTG++GK+T T + ++L G +VG
Sbjct: 91 TPLLAARERGSVITSEMEVFFQVCP--CEIIAVTGSDGKTTTTTIISELLKKAGYNVYVG 148
Query: 76 GNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLER 135
GN+G PL P+ +P + V+E+SS+Q+ + P ++VV N+ P+HL+
Sbjct: 149 GNIGKPL------LAETPNMEPD-DMVVLELSSFQLMTMD--MSPDIAVVTNVAPNHLDV 199
Query: 136 HKTMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAK 195
HK+M+ Y K ++F+H L + + N+ + K N+ ++ K
Sbjct: 200 HKSMEEYVEAKENIFAHQSTENLAVFNWDNEITRDFSKKAPGNVMCFSRREMLERGIYVK 259
Query: 196 -TASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRT 254
A + G L L ++ + G HN N A +V GL V E +
Sbjct: 260 DDAIWCADRDGHRKVLLLSDILLPGNHNVENYMAAIAAVNGL---VSDETIRLFARSFGG 316
Query: 255 PPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
HR+++V R + GV + +DS A++ T GL + K +++ GG K
Sbjct: 317 VEHRIELV-RTVDGVRYYNDSIASSPTRTIAGLRSFE-EKVILIAGGYDK 364
>gi|53711599|ref|YP_097591.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Bacteroides
fragilis YCH46]
gi|60679849|ref|YP_209993.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Bacteroides
fragilis NCTC 9343]
gi|60389935|sp|Q64ZL9.1|MURD_BACFR RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|81174945|sp|Q5LIJ5.1|MURD_BACFN RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|52214464|dbj|BAD47057.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Bacteroides
fragilis YCH46]
gi|60491283|emb|CAH06031.1| putative UDP-N-acetylmuramoylalanine--D-glutamate ligase
[Bacteroides fragilis NCTC 9343]
Length = 444
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 152/310 (49%), Gaps = 40/310 (12%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
L + G ++SE++FA + K++ +TG+NGK+T + + + G+ + GN+G
Sbjct: 82 LREQGTPIISEIEFAGRYT--DAKMICITGSNGKTTTTSLIYHIFKSAGLNVGLAGNIGK 139
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDHLERHK-T 138
L AL ++ K V+E+SS+Q++ N Y F ++V++N+TPDHL+R+
Sbjct: 140 SL--------ALQVAEEKHDYYVIELSSFQLD--NMYNFRADIAVLMNITPDHLDRYDHC 189
Query: 139 MKNYALTKCHLFSHMVNTKLGLL----PFGNQHLNE-AIKGHRFNLAWIGAFPGVKIDTE 193
M+NY K + + + + P + L++ I+ H +P I E
Sbjct: 190 MQNYINAKFRITQNQTSEDAFIFWNDDPIIKRELDKHGIRAH--------LYPFSAIKEE 241
Query: 194 AKTASFEVPAVGVVS----QLQLHNMKVMGRHNYHNAAVAALSV-LGLDIGVDVEALNST 248
A E V + ++ + + G+HN +N+ A +S L G+ E +
Sbjct: 242 GSIAYVEDHEVVITEPIAFNMEQEQLALTGQHNLYNSLAAGISANLA---GITKEDIRKA 298
Query: 249 IEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNG 308
+ + HR++ V R ++G+ +++DSKATN+ + L + K V++LGG+ K G
Sbjct: 299 LSDFQGVEHRLEKVAR-VRGIDFINDSKATNVNSCWYALQSMTT-KTVLILGGKDK---G 353
Query: 309 QESNGFEKLI 318
+ E+L+
Sbjct: 354 NDYTEIEELV 363
>gi|288801604|ref|ZP_06407046.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Prevotella
melaninogenica D18]
gi|288335646|gb|EFC74079.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Prevotella
melaninogenica D18]
Length = 443
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 156/306 (50%), Gaps = 30/306 (9%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
L+ G ++SE++FA + + K++ +TG+NGK+T + + + G +A + GN+GN
Sbjct: 82 LIAQGTHIISEIEFAGRYT--NSKMICITGSNGKTTTTSLIYHIFKDAGYDAGLAGNIGN 139
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDHLERHK-T 138
L AL ++ + ++E+SS+Q++ N Y F ++++LN+TPDHL+R+
Sbjct: 140 SL--------ALQVAEDPHEYYIIELSSFQLD--NMYDFRANIAILLNITPDHLDRYDYK 189
Query: 139 MKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTAS 198
+NYA K + + TK + N + +F++ + +P ++
Sbjct: 190 FENYADAKMRIIQNQ--TKEDSFIYWNDDPVIKKELEKFDVHAV-CYPFSELKENGSIGY 246
Query: 199 FEVPAVGVVS----QLQLHNMKVMGRHNYHNAAVAALSVLGLDI-GVDVEALNSTIEILR 253
E + ++ ++ + GRHN +N+ A ++ DI G+ E + ++
Sbjct: 247 IEEGQYTIEQPEPFNMEQEDLSLTGRHNIYNSLAAGIAS---DISGIKKENIRKSLSDFP 303
Query: 254 TPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNG 313
HR++ V + + GV +++DSKATN++A L ++ ++++GG+ K G + N
Sbjct: 304 GVEHRLEKVCK-VAGVQYINDSKATNVDACWYALESMRT-PTILIIGGKDK---GNDYNS 358
Query: 314 FEKLIE 319
+ L++
Sbjct: 359 IKDLVK 364
>gi|453329514|dbj|GAC88358.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Gluconobacter
thailandicus NBRC 3255]
Length = 448
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 123/269 (45%), Gaps = 47/269 (17%)
Query: 44 KILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAV 103
+ AVTGTNGKST + +L G+ GGNLG +ALP P V
Sbjct: 113 RFAAVTGTNGKSTTTALLAHLLQSAGVPCSAGGNLGTA-------SLALPL-LPDQGAYV 164
Query: 104 VEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPF 163
+E+SSY +E +++ T + +LN+TPDHL+RH M YA K H+F +M +
Sbjct: 165 IEMSSYMLERLDRFHAST-ACLLNITPDHLDRHGDMDGYAAAKAHVFDNMTSD------- 216
Query: 164 GNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQL-------QLHNMK 216
+LA IG + D + + E+ A GV L +
Sbjct: 217 --------------DLAAIG-----QDDPWCQKIADELTAQGVPVTLLNPDTVPEFVGDA 257
Query: 217 VMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSK 276
+ GRHN N VAA + +G++ +A+ + HR+Q + + GV +V+DSK
Sbjct: 258 LPGRHNLQN--VAAAWAMARHLGLNDDAIRKGLASFPGLEHRLQKI-AECDGVAFVNDSK 314
Query: 277 ATNLEATCTGLMDLKGHKCVILLGGQAKV 305
ATN EA L + + + GG AK
Sbjct: 315 ATNAEAASKALGSYD--RVMWIAGGTAKA 341
>gi|336407786|ref|ZP_08588282.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides sp.
2_1_56FAA]
gi|375356688|ref|YP_005109460.1| putative UDP-N-acetylmuramoylalanine--D-glutamate ligase
[Bacteroides fragilis 638R]
gi|383116600|ref|ZP_09937348.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides sp.
3_2_5]
gi|423248261|ref|ZP_17229277.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides
fragilis CL03T00C08]
gi|423253210|ref|ZP_17234141.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides
fragilis CL03T12C07]
gi|423259356|ref|ZP_17240279.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides
fragilis CL07T00C01]
gi|423263672|ref|ZP_17242675.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides
fragilis CL07T12C05]
gi|251948126|gb|EES88408.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides sp.
3_2_5]
gi|301161369|emb|CBW20909.1| putative UDP-N-acetylmuramoylalanine--D-glutamate ligase
[Bacteroides fragilis 638R]
gi|335944865|gb|EGN06682.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides sp.
2_1_56FAA]
gi|387776936|gb|EIK39036.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides
fragilis CL07T00C01]
gi|392657110|gb|EIY50747.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides
fragilis CL03T12C07]
gi|392660368|gb|EIY53982.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides
fragilis CL03T00C08]
gi|392707094|gb|EIZ00214.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides
fragilis CL07T12C05]
Length = 444
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 152/310 (49%), Gaps = 40/310 (12%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
L + G ++SE++FA + K++ +TG+NGK+T + + + G+ + GN+G
Sbjct: 82 LREQGTPIISEIEFAGRYT--DAKMICITGSNGKTTTTSLIYHIFKSAGLNVGLAGNIGK 139
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDHLERHK-T 138
L AL ++ K V+E+SS+Q++ N Y F ++V++N+TPDHL+R+
Sbjct: 140 SL--------ALQVAEEKHDYYVIELSSFQLD--NMYNFRADIAVLMNITPDHLDRYDHC 189
Query: 139 MKNYALTKCHLFSHMVNTKLGLL----PFGNQHLNE-AIKGHRFNLAWIGAFPGVKIDTE 193
M+NY K + + + + P + L++ I+ H +P I E
Sbjct: 190 MQNYINAKFRITQNQTSEDAFIFWNDDPIIKRELDKHGIRAH--------LYPFSAIKEE 241
Query: 194 AKTASFEVPAVGVVS----QLQLHNMKVMGRHNYHNAAVAALSV-LGLDIGVDVEALNST 248
A E V + ++ + + G+HN +N+ A +S L G+ E +
Sbjct: 242 GSIAYVEDHEVVITEPIAFNMEQEQLALTGQHNLYNSLAAGISANLA---GITKEDIRKA 298
Query: 249 IEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNG 308
+ + HR++ V R ++G+ +++DSKATN+ + L + K V++LGG+ K G
Sbjct: 299 LSDFQGVEHRLEKVAR-VRGIDFINDSKATNVNSCWYALQSMTT-KTVLILGGKDK---G 353
Query: 309 QESNGFEKLI 318
+ E+L+
Sbjct: 354 NDYTEIEELV 363
>gi|393722596|ref|ZP_10342523.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Sphingomonas sp.
PAMC 26605]
Length = 377
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 87/264 (32%), Positives = 128/264 (48%), Gaps = 38/264 (14%)
Query: 44 KILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAV 103
K++ +TGTNGKST V +L GI + +GGN+G P+ E LP+S V V
Sbjct: 59 KVVGITGTNGKSTTTALVHHILQTAGIPSLMGGNIGLPILEQD----PLPASG----VYV 110
Query: 104 VEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPF 163
+E+SSYQ+++ + C V+V+LNLTPDHL+R+ + YA +K LF+ T ++
Sbjct: 111 LELSSYQIDLTHSLDC-DVAVLLNLTPDHLDRYDGFEGYAASKARLFAMQSATHAAVIGI 169
Query: 164 GNQH---LNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGR 220
G+ + + +L I PGV +D Q + G
Sbjct: 170 GDTPSALIARGLSARGEHLTKIA--PGVCMD-------------------QSRWPSLQGP 208
Query: 221 HNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNL 280
HN NA A + L GV ++ +E PHRM+ V GV +V+DSKATN
Sbjct: 209 HNAQNALAAIAACQAL--GVPEAMIDRGLESFAGLPHRMERVAVR-NGVAFVNDSKATNP 265
Query: 281 EATCTGLMDLKGHKCVILLGGQAK 304
E+T L + +LGG+AK
Sbjct: 266 ESTAPALAAFS--RVHWILGGKAK 287
>gi|423269850|ref|ZP_17248822.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides
fragilis CL05T00C42]
gi|423272696|ref|ZP_17251643.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides
fragilis CL05T12C13]
gi|392700696|gb|EIY93858.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides
fragilis CL05T00C42]
gi|392708610|gb|EIZ01716.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides
fragilis CL05T12C13]
Length = 444
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 152/310 (49%), Gaps = 40/310 (12%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
L + G ++SE++FA + K++ +TG+NGK+T + + + G+ + GN+G
Sbjct: 82 LREQGTPIISEIEFAGRYT--DAKMICITGSNGKTTTTSLIYHIFKSAGLNVGLAGNIGK 139
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDHLERHK-T 138
L AL ++ K V+E+SS+Q++ N Y F ++V++N+TPDHL+R+
Sbjct: 140 SL--------ALQVAEEKHDYYVIELSSFQLD--NMYNFRADIAVLMNITPDHLDRYDHC 189
Query: 139 MKNYALTKCHLFSHMVNTKLGLL----PFGNQHLNE-AIKGHRFNLAWIGAFPGVKIDTE 193
M+NY K + + + + P + L++ I+ H +P I E
Sbjct: 190 MQNYINAKFRITQNQTSEDAFIFWNDDPIIKRELDKHGIRAH--------LYPFSAIKEE 241
Query: 194 AKTASFEVPAVGVVS----QLQLHNMKVMGRHNYHNAAVAALSV-LGLDIGVDVEALNST 248
A E V + ++ + + G+HN +N+ A +S L G+ E +
Sbjct: 242 GSIAYVEDHEVVITEPIAFNMEQEQLALTGQHNLYNSLAAGISANLA---GITKEDIRKA 298
Query: 249 IEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNG 308
+ + HR++ V R ++G+ +++DSKATN+ + L + K V++LGG+ K G
Sbjct: 299 LSDFQGVEHRLEKVAR-VRGIDFINDSKATNVNSCWYALQSMTT-KTVLILGGKDK---G 353
Query: 309 QESNGFEKLI 318
+ E+L+
Sbjct: 354 NDYTEIEELV 363
>gi|392399186|ref|YP_006435787.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Flexibacter
litoralis DSM 6794]
gi|390530264|gb|AFM05994.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Flexibacter
litoralis DSM 6794]
Length = 471
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 143/270 (52%), Gaps = 32/270 (11%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V+SE++FA++ + + KI+A+TGTNGK+T +L + G+ + GN+G + A
Sbjct: 104 VVSEIEFASRFV--TGKIIAITGTNGKTTTALLTYHLLKNAGLSVCLVGNIGKSFAREAI 161
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK-TMKNYALTK 146
+ ++ V+EVSS+Q++ ++ F P V+V+LN+TPDHL+R+ ++NY +K
Sbjct: 162 --------EDEYDYYVIEVSSFQLDDIDE-FRPHVAVLLNITPDHLDRYNYQIENYVNSK 212
Query: 147 CHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFE------ 200
+ + N + N+ E++K RF+ G + I + + S +
Sbjct: 213 FKINENQSNKDFFIY---NEEDIESLKYIRFH-RLAGRMLPINISKQKEYLSLQNKLRIS 268
Query: 201 -VPAVGVVSQLQLHNMKVMGRHNYHNAAVAAL--SVLGLDIGVDVEALNSTIEILRTPPH 257
PA + + + ++ + G HN N A A + ++ L ++ L S + PH
Sbjct: 269 ATPAQML--DIPISDLPLQGAHNLLNIAAAGMIAQIIRLSDKQIIKGLKS----FKNAPH 322
Query: 258 RMQIVHRDIQGVTWVDDSKATNLEATCTGL 287
R++ + + I+G+T+++DSKATN++A L
Sbjct: 323 RLEKI-KTIKGITFINDSKATNVDAVSYAL 351
>gi|375013443|ref|YP_004990431.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Owenweeksia
hongkongensis DSM 17368]
gi|359349367|gb|AEV33786.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Owenweeksia
hongkongensis DSM 17368]
Length = 447
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 148/308 (48%), Gaps = 53/308 (17%)
Query: 14 KATGLACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAF 73
KA + + ++G V+SE++F + KI+A+TG+NGK+T +L G+
Sbjct: 78 KAAVMKAIREAGIEVISEIEFGYRYCKG--KIIAITGSNGKTTTTLLTYDILKKAGVSVA 135
Query: 74 VGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHL 133
+GGN+GN A ++ V+E+SS+Q++ N F P ++++ N+TPDHL
Sbjct: 136 LGGNVGNSF--------AASVAESDHDYYVLEISSFQLDDINS-FKPHIAILCNITPDHL 186
Query: 134 ERHK-TMKNYALTKCHLFSHMVNTKLGL--------LPFGNQHL-----------NEAIK 173
+R+ M+NYA +K + + T + L + QH NE +
Sbjct: 187 DRYDYKMENYAASKFAITKYQDETDFFIYNKDDAETLKYMPQHTIKSKPLAITLQNENTE 246
Query: 174 GHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSV 233
G AW+ + I + Q+ ++ + + G+HN +N+ + L+
Sbjct: 247 G-----AWLDETNTIHI------------TINNQEQMNINELALQGKHNTYNSMASGLAS 289
Query: 234 LGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGH 293
L G+ EA+ ++ + HR++ V + + G+ +++DSKATN+ +T L ++ H
Sbjct: 290 KLL--GIRKEAIRESLAGFESIEHRLEPVLQ-VYGMQFINDSKATNVNSTWYALDNM--H 344
Query: 294 KCVILLGG 301
+ I + G
Sbjct: 345 EPTIWIAG 352
>gi|297588289|ref|ZP_06946932.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Finegoldia
magna ATCC 53516]
gi|297573662|gb|EFH92383.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Finegoldia
magna ATCC 53516]
Length = 441
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 142/278 (51%), Gaps = 13/278 (4%)
Query: 27 RVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAA 86
V+S+L+ A Q I IKI+A+TGTNGK+T + + +MLN G +A GN+G +
Sbjct: 83 EVVSDLELA-QRIFEDIKIVAITGTNGKTTTTSLMTKMLNDSGRKAISIGNIGVGMLWEI 141
Query: 87 FHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTK 146
++ S K + V+E SS+Q+E K F P S ++N+TPDH++ H +M+NY K
Sbjct: 142 YN-----SDKDTY--FVIECSSFQLE-STKNFKPQYSCIINITPDHIDWHGSMQNYVNAK 193
Query: 147 CHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGV 206
++ + +L +++ E K + N+ + VK + K S
Sbjct: 194 KNVLKNQDENCYTVLNVDDEYYEECKKFTKSNVYDVSTSTDVKKGSFIKDDSIYFSDSDC 253
Query: 207 VSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDI 266
+ L ++K++G HNY N L IG++ +++ T+ HR++ V R++
Sbjct: 254 NKIIDLKDVKLIGYHNYQNVLFCV--TLAKLIGINDDSIRQTLMSFSGVEHRLEFV-REL 310
Query: 267 QGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
GV + +DSK TN++A+ + + +IL GG K
Sbjct: 311 SGVKYYNDSKGTNVDASVKAIESFDKN-VIILAGGYDK 347
>gi|421277045|ref|ZP_15727865.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
mitis SPAR10]
gi|395876326|gb|EJG87402.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
mitis SPAR10]
Length = 450
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 146/300 (48%), Gaps = 29/300 (9%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L+ G V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LEKGIPVLTEVELAYLI--SDAPIVGITGSNGKTTTTTMIGEVLTAAGQNGLLSGNIGYP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A + V+E+SS+Q+ + + F P ++V+ NL P H++ H + ++
Sbjct: 151 ASQVA-------QTATDKDTLVMELSSFQL-MGIQEFHPEIAVITNLMPTHIDYHGSFED 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDT---EAKTAS 198
Y K ++ S+M +L F NQ L + + + N A + K+D E
Sbjct: 203 YVAAKWNIPSNMTAADYLVLNF-NQELAKEL-ATKTNAAVVPFSTLEKVDGAYLEDGLLY 260
Query: 199 FEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHR 258
F V + + V G HN N A+A ++V L GVD E + T+ HR
Sbjct: 261 FRGEKV-----MAADEIGVPGSHNVEN-ALATIAVAKLR-GVDNETIKETLSAFGGVKHR 313
Query: 259 MQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
+Q V + I GV + +DSK+TN+ AT L K +++ GG + N F++L+
Sbjct: 314 LQFVDQ-INGVKFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------GNEFDELV 366
>gi|329118771|ref|ZP_08247469.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Neisseria
bacilliformis ATCC BAA-1200]
gi|327465118|gb|EGF11405.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Neisseria
bacilliformis ATCC BAA-1200]
Length = 450
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 93/300 (31%), Positives = 149/300 (49%), Gaps = 33/300 (11%)
Query: 23 QSGKRVMSELDFAAQVI-PRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
Q+G RV+ +++ A + R KI+A+TG+NGK+TV + VG + G++ V GN+G P
Sbjct: 94 QNGGRVLGDIEIFAHIANRRGDKIIAITGSNGKTTVTSLVGHLCEKCGLDTVVAGNIGTP 153
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
+ EA + K V V+E+SS+Q+E + P+ + VLN++ DHL+R+ + +
Sbjct: 154 VLEA-----EMQRGGKKAGVWVLELSSFQLE-NTESLRPSAAAVLNISEDHLDRYDDLLD 207
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASF-- 199
YA TK +F + G Q LN R A A GVK + K A +
Sbjct: 208 YAHTKDKIFRGV----------GVQVLNADDALCR---AMKRAGRGVKWFSLEKQADYWL 254
Query: 200 --EVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPH 257
E + VS ++ + + ++ A V A L +G+ E L I+ + PH
Sbjct: 255 ERETGRLKAVSDDLMNTTDIPLQGLHNAANVMAAVALCEAVGLPREELVKHIQTFKGLPH 314
Query: 258 RMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLG---GQ-----AKVLNGQ 309
R++ + + GV ++DDSK TN+ AT + L+ IL G GQ A+VL G+
Sbjct: 315 RVEKIG-EKNGVVFIDDSKGTNVGATAAAISGLQSPLFAILGGLGKGQDFTPLAQVLRGK 373
>gi|258625125|ref|ZP_05720042.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio mimicus
VM603]
gi|258582576|gb|EEW07408.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio mimicus
VM603]
Length = 440
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 150/328 (45%), Gaps = 61/328 (18%)
Query: 2 WML-WLFLLEFQLKATGLAC-------LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNG 53
W L WL + + G+A +L +G V+ +++ A + + ++A+TG+NG
Sbjct: 61 WNLEWLLSADLVVTNPGIALATPEIQQVLAAGLPVVGDIELFAWHVDK--PVIAITGSNG 118
Query: 54 KSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEI 113
KSTV G + N G++ VGGN+G P AL P+ ++ V+E+SS+Q+E
Sbjct: 119 KSTVTDLSGVLANAAGVKTAVGGNIGVP---------ALDLISPEVELYVLELSSFQLET 169
Query: 114 PNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIK 173
+ + LNL+ DH++R++ M++Y K +F H +
Sbjct: 170 TSSLKL-KAAAFLNLSEDHMDRYQGMEDYRQAKLRIFDHAETAVV--------------- 213
Query: 174 GHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQ--------------LQLHNMKVMG 219
N + FP + T E PA V++ L + ++G
Sbjct: 214 ----NADDVQTFPDHAAHLQVVTFGVEQPAQFSVAEHQGREYLFARDNAVLASSELSLVG 269
Query: 220 RHNYHN--AAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKA 277
RHN N +A L G+++ + ++AL S + HR Q+V D G+ WV+DSKA
Sbjct: 270 RHNVANVLTVLALLDSAGVNVRLALDALKSYTGLT----HRCQVV-ADNHGIKWVNDSKA 324
Query: 278 TNLEATCTGLMDLKGH-KCVILLGGQAK 304
TN+ +T L LK + +L+GG K
Sbjct: 325 TNVASTLAALSGLKIEGQLYLLVGGVGK 352
>gi|395786573|ref|ZP_10466300.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bartonella tamiae
Th239]
gi|423716534|ref|ZP_17690724.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bartonella tamiae
Th307]
gi|395422871|gb|EJF89067.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bartonella tamiae
Th239]
gi|395428608|gb|EJF94683.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bartonella tamiae
Th307]
Length = 512
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 134/280 (47%), Gaps = 33/280 (11%)
Query: 41 RSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQ 100
R I +A+TGTNGKST F+ +L G + +GGN+G + +AL K K +
Sbjct: 150 RDIPFIAITGTNGKSTTTAFIDHLLKIAGQDVQMGGNIGTAI-------LALEPFK-KNR 201
Query: 101 VAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGL 160
+ VVE SS+Q+++ PT+ ++LNL+PDH++RH + +Y K L + +G+
Sbjct: 202 IYVVECSSFQIDLAPS-LNPTIGILLNLSPDHIDRHGSFAHYNAIKKRLIAKAHYALIGI 260
Query: 161 LPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGR 220
+ + +A+K + I P + K +FE + L L+ + +
Sbjct: 261 EEKETRAIYDALKSKNHKIYPISKKP---YSEQKKIVNFERGY--FLDHLTLYELNEVNN 315
Query: 221 H---------------NYHNAAVAALSVLGLDI-GVDVEALNSTIEILRTPPHRMQIVHR 264
H HNA A + + LDI + ++ +++ + PHRMQ V R
Sbjct: 316 HIAKKRVSLKNVISLRGSHNAQNAMMGLACLDILNLKLDNIDAAFSSYQGLPHRMQQV-R 374
Query: 265 DIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
I V +V+DSKATN EA+ L + ++GG AK
Sbjct: 375 KIGSVLFVNDSKATNAEASAPALATFE--HIYWIIGGVAK 412
>gi|119505122|ref|ZP_01627198.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [marine gamma
proteobacterium HTCC2080]
gi|119459104|gb|EAW40203.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [marine gamma
proteobacterium HTCC2080]
Length = 453
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 99/310 (31%), Positives = 141/310 (45%), Gaps = 36/310 (11%)
Query: 27 RVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAA 86
RVM ++D V S ++ +TG+NGKSTV V ML+ G VGGN G P
Sbjct: 98 RVMGDIDLF--VAAASAPVIGITGSNGKSTVTAMVASMLSACGKRVAVGGNFGTP----- 150
Query: 87 FHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTK 146
AL V+E+SS+Q+E V+ VLN++ DHL+RH +M Y K
Sbjct: 151 ----ALDLLDQAVDFYVLELSSFQLERAQPLKL-AVATVLNVSADHLDRHGSMPRYHHAK 205
Query: 147 CHLF--SHMV--NTKLGL-LPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEV 201
+F +H V N L LP + G + W P +D V
Sbjct: 206 HKIFQGAHAVVANRADSLTLPL--------LDGGTRQVLWRPTDP--DLDEFGVRQLDGV 255
Query: 202 PAV--GVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRM 259
P V G + +K+ G HN +N A + LD+ +E L + ++ PHR
Sbjct: 256 PYVCCGFTPLFPVSELKLKGMHNLNNVLAALALGVALDL--PLERLIAGLKDFSGLPHRC 313
Query: 260 QIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLIE 319
++V D GV+W++DSK TN+ AT L L + V+L+ G V GQ+ L E
Sbjct: 314 ELVLDD-AGVSWINDSKGTNVGATRAALAGLGAQENVVLIAG--GVGKGQDFTAL--LPE 368
Query: 320 PLNHHRCVIT 329
NH R V+T
Sbjct: 369 VRNHCRRVLT 378
>gi|441503427|ref|ZP_20985433.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Photobacterium sp.
AK15]
gi|441428925|gb|ELR66381.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Photobacterium sp.
AK15]
Length = 445
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 152/322 (47%), Gaps = 51/322 (15%)
Query: 2 W-MLWLFLLEFQLKATGLAC----LLQS---GKRVMSELDFAAQVIPRSIKILAVTGTNG 53
W M WL + + + G+A L+Q+ G ++ +++ A+ + + ++A+TG+NG
Sbjct: 61 WNMDWLLAADMIVASPGIALATPELVQAAEAGIEIVGDIELFARAVTK--PVVAITGSNG 118
Query: 54 KSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEI 113
KSTV + VG+M GI VGGN+G AL + V+E+SS+Q+E
Sbjct: 119 KSTVTSLVGEMAKEAGINVGVGGNIG---------FAALDMLAQDHDLYVLELSSFQLET 169
Query: 114 PNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIK 173
+ +V LNL+ DH++R+ +++Y+ K +F H +L +
Sbjct: 170 TSS-LKLKAAVYLNLSEDHMDRYNGLEDYSQAKMRIFCH---AELAVF------------ 213
Query: 174 GHRFNLA-----WIGAFPGVKIDTEA----KTASFEVPAVGVVSQLQLHNMKVMGRHNYH 224
+R +LA + GA D+EA E AV + + ++GRHN
Sbjct: 214 -NRDDLATRPVDFYGAMTSFGFDSEAYGLITVNDEEYLAVDQQPVMATSQIALVGRHNVA 272
Query: 225 NAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATC 284
N+ A IG D A ++ HR Q+V + Q V WV+DSKATNL +T
Sbjct: 273 NSLAALALADAAGIGHD--AACRALQRYNGLAHRCQLV-ANYQDVRWVNDSKATNLASTL 329
Query: 285 TGL--MDLKGHKCVILLGGQAK 304
L ++L G K +L+GG K
Sbjct: 330 AALKGLNLSG-KLHLLVGGDGK 350
>gi|262170650|ref|ZP_06038328.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio mimicus
MB-451]
gi|261891726|gb|EEY37712.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio mimicus
MB-451]
Length = 440
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 150/328 (45%), Gaps = 61/328 (18%)
Query: 2 WML-WLFLLEFQLKATGLAC-------LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNG 53
W L WL + + G+A +L +G V+ +++ A + + ++A+TG+NG
Sbjct: 61 WNLEWLLSADLVVTNPGIALATPEIQQVLAAGIPVVGDIELFAWHVDK--PVIAITGSNG 118
Query: 54 KSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEI 113
KSTV G + N G++ VGGN+G P AL P+ ++ V+E+SS+Q+E
Sbjct: 119 KSTVTDLSGVLANAAGVKTAVGGNIGVP---------ALDLISPEVELYVLELSSFQLET 169
Query: 114 PNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIK 173
+ + LNL+ DH++R++ M++Y K +F H +
Sbjct: 170 TSSLKL-KAAAFLNLSEDHMDRYQGMEDYRQAKLRIFDHAETAVV--------------- 213
Query: 174 GHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQ--------------LQLHNMKVMG 219
N + FP + T E PA V++ L + ++G
Sbjct: 214 ----NADDVQTFPDHAAHLQVVTFGVEQPAQFSVAEHQGREYLFARDNAVLASSELSLVG 269
Query: 220 RHNYHN--AAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKA 277
RHN N +A L G+++ + ++AL S + HR Q+V D G+ WV+DSKA
Sbjct: 270 RHNVANVLTVLALLDSAGVNVRLALDALKSYTGLT----HRCQVV-ADNHGIKWVNDSKA 324
Query: 278 TNLEATCTGLMDLKGH-KCVILLGGQAK 304
TN+ +T L LK + +L+GG K
Sbjct: 325 TNVASTLAALSGLKIEGQLYLLVGGVGK 352
>gi|423312892|ref|ZP_17290828.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides
vulgatus CL09T03C04]
gi|392686923|gb|EIY80222.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides
vulgatus CL09T03C04]
Length = 444
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 147/306 (48%), Gaps = 30/306 (9%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
L G ++SE++FA + + K++ +TG+NGK+T + + + G+ + GN+G
Sbjct: 83 LKSQGTPIISEIEFAGRYT--NAKMICITGSNGKTTTTSLIYHIFKKAGMNVGLAGNIGQ 140
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDHLERHK-T 138
L+ C + V+E+SS+Q++ N Y F ++V++N+TPDHL+R+
Sbjct: 141 SLAYQVAEC--------NYDYYVIELSSFQLD--NMYKFHANIAVLMNITPDHLDRYDHQ 190
Query: 139 MKNYALTKCHLFSHMVNTKLGLL----PFGNQHLNE-AIKGHRFNLAWIGAFPGVKIDTE 193
M+NY K + + + P + L++ I GH + A G E
Sbjct: 191 MQNYVDAKFRIIQNQTPDDAFIFWNDDPIIQRELHKYGIHGHYYPFAERKE-EGTAAYVE 249
Query: 194 AKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILR 253
F P + ++ + + G HN N+ A +S L G+ E + + +
Sbjct: 250 QDKVYFTEP---IAFNMEQEELALTGTHNLFNSMAAGISA-NL-AGIRKECIREALGDFK 304
Query: 254 TPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNG 313
HR++ V R ++GV +++DSKATN+ + L +K K +++LGG+ K G + N
Sbjct: 305 GVEHRLEKVCR-VRGVDYINDSKATNVNSCWYALQSMKT-KTILILGGKDK---GNDYNE 359
Query: 314 FEKLIE 319
L++
Sbjct: 360 IADLVK 365
>gi|352095857|ref|ZP_08956804.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Synechococcus sp.
WH 8016]
gi|351677213|gb|EHA60362.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Synechococcus sp.
WH 8016]
Length = 466
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 138/292 (47%), Gaps = 20/292 (6%)
Query: 18 LACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGN 77
L L G V E+ A Q + R + VTGTNGK+TV + +LN G+ A + GN
Sbjct: 86 LMQLRDHGVTVRGEMAVAWQAL-RHCPWIGVTGTNGKTTVTHLLHHVLNQAGLHAPMAGN 144
Query: 78 LGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK 137
+G+ +E C+ +KP + V+E+SSYQ+E N+ PT+ + LTPDHLERH
Sbjct: 145 VGHSAAELGLQCMDPSQTKPDW--IVMEMSSYQIESANEVR-PTIGIWTTLTPDHLERHG 201
Query: 138 TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTA 197
+M Y K L +K +L + L ++ + H + W+ + + + E
Sbjct: 202 SMDAYRDIKQGLLQ---RSKHAVLNADDTDL-KSRQAHWPDAQWVSS---AQTNHEPFNL 254
Query: 198 SFEVPAVGVVSQ-----LQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEIL 252
V G V + + + G HN N + ++ L G++ +A+ +
Sbjct: 255 ELWVNPEGFVCNKKGALFPANALAMPGEHNRQNMLL--VTAAALQAGLEPQAIERGLRSF 312
Query: 253 RTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
PHR++ + + G+ +DSKATN +A L + G ++L GG +K
Sbjct: 313 PGVPHRLENL-GSLHGMNVFNDSKATNYDAAAVALQAVPG-PIILLAGGLSK 362
>gi|319639798|ref|ZP_07994528.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides sp.
3_1_40A]
gi|345518945|ref|ZP_08798378.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides sp.
4_3_47FAA]
gi|254833581|gb|EET13890.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides sp.
4_3_47FAA]
gi|317388615|gb|EFV69464.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides sp.
3_1_40A]
Length = 444
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 147/306 (48%), Gaps = 30/306 (9%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
L G ++SE++FA + + K++ +TG+NGK+T + + + G+ + GN+G
Sbjct: 83 LKSQGTPIISEIEFAGRYT--NAKMICITGSNGKTTTTSLIYHIFKKAGMNVGLAGNIGQ 140
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDHLERHK-T 138
L+ C + V+E+SS+Q++ N Y F ++V++N+TPDHL+R+
Sbjct: 141 SLAYQVAEC--------NYDYYVIELSSFQLD--NMYKFHANIAVLMNITPDHLDRYDHQ 190
Query: 139 MKNYALTKCHLFSHMVNTKLGLL----PFGNQHLNE-AIKGHRFNLAWIGAFPGVKIDTE 193
M+NY K + + + P + L++ I GH + A G E
Sbjct: 191 MQNYVDAKFRIIQNQTPDDAFIFWNDDPIIQRELHKYGIHGHYYPFAERKE-EGTAAYVE 249
Query: 194 AKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILR 253
F P + ++ + + G HN N+ A +S L G+ E + + +
Sbjct: 250 QDKVYFTEP---IAFNMEQEELALTGTHNLFNSMAAGISA-NL-AGIRKECIREALGDFK 304
Query: 254 TPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNG 313
HR++ V R ++GV +++DSKATN+ + L +K K +++LGG+ K G + N
Sbjct: 305 GVEHRLEKVCR-VRGVDYINDSKATNVNSCWYALQSMKT-KTILILGGKDK---GNDYNE 359
Query: 314 FEKLIE 319
L++
Sbjct: 360 IADLVK 365
>gi|220904382|ref|YP_002479694.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Desulfovibrio
desulfuricans subsp. desulfuricans str. ATCC 27774]
gi|254766049|sp|B8IZT9.1|MURD_DESDA RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|219868681|gb|ACL49016.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Desulfovibrio
desulfuricans subsp. desulfuricans str. ATCC 27774]
Length = 434
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 117/255 (45%), Gaps = 37/255 (14%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
+++E++ A + + +LAVTGT+GK+T + ML+ G F+GGN+G PLSE
Sbjct: 105 ILAEMELAWRYLENE-PVLAVTGTSGKTTTASLAAAMLHEQGYAVFLGGNIGTPLSEYVL 163
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
S K V V+E+SS+Q++ + FCP ++LN+TP+HL+ HK M Y K
Sbjct: 164 -------SGHKADVLVLEISSFQLQTCST-FCPRAGILLNITPNHLDYHKDMAEYTEAKF 215
Query: 148 HLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVV 207
LF L +L G + + A + V V
Sbjct: 216 RLFRCQDEGDLAVL-------------------------GESLRSLAARYGLKARQVYVS 250
Query: 208 SQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQ 267
+ +MG HN N AA L GV E + PHR++ V R+++
Sbjct: 251 DAGRFSGSSLMGAHNRVNEE-AAWQACRL-FGVSEENAARALARFAPLPHRLERV-RELE 307
Query: 268 GVTWVDDSKATNLEA 282
GV +V+DSK T + +
Sbjct: 308 GVLFVNDSKCTTVSS 322
>gi|449143733|ref|ZP_21774556.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Vibrio
mimicus CAIM 602]
gi|449080731|gb|EMB51642.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Vibrio
mimicus CAIM 602]
Length = 440
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 150/328 (45%), Gaps = 61/328 (18%)
Query: 2 WML-WLFLLEFQLKATGLAC-------LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNG 53
W L WL + + G+A +L +G V+ +++ A + + ++A+TG+NG
Sbjct: 61 WNLEWLLSADLVVTNPGIALATPEIQQVLATGIPVVGDIELFAWHVDK--PVIAITGSNG 118
Query: 54 KSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEI 113
KSTV G + N G++ VGGN+G P AL P+ ++ V+E+SS+Q+E
Sbjct: 119 KSTVTDLSGVLANAAGVKTAVGGNIGVP---------ALDLISPEVELYVLELSSFQLET 169
Query: 114 PNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIK 173
+ + LNL+ DH++R++ M++Y K +F H +
Sbjct: 170 TSSLKL-KAAAFLNLSEDHMDRYQGMEDYRQAKLRIFDHAETAVV--------------- 213
Query: 174 GHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQ--------------LQLHNMKVMG 219
N + FP + T E PA V++ L + ++G
Sbjct: 214 ----NADDVQTFPDHAAHLQVVTFGVEQPAQFSVAEHQGREYLFARDNAVLASSELSLVG 269
Query: 220 RHNYHN--AAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKA 277
RHN N +A L G+++ + ++AL S + HR Q+V D G+ WV+DSKA
Sbjct: 270 RHNVANVLTVLALLDSAGVNVRLALDALKSYTGLT----HRCQVV-ADNHGIKWVNDSKA 324
Query: 278 TNLEATCTGLMDLKGH-KCVILLGGQAK 304
TN+ +T L LK + +L+GG K
Sbjct: 325 TNVASTLAALSGLKIEGQLYLLVGGVGK 352
>gi|429740559|ref|ZP_19274243.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Porphyromonas
catoniae F0037]
gi|429160767|gb|EKY03217.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Porphyromonas
catoniae F0037]
Length = 459
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 151/301 (50%), Gaps = 29/301 (9%)
Query: 14 KATGLACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAF 73
KA + + + G V+SE++ A + + K++ +TG+NGK+T ++ +L+ G+
Sbjct: 79 KAPIMQAIREQGIPVISEIELAGRYLKG--KVIGITGSNGKTTTTMWLHHILSEAGLRVG 136
Query: 74 VGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDH 132
+ GN+G L+ + ++P++ VVE+SS+Q++ + Y F +++++N+TPDH
Sbjct: 137 LAGNVGFSLARQ-----VITDNQPEY--FVVELSSFQLD--DMYQFRVHIALLMNITPDH 187
Query: 133 LER-HKTMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHR---FNLAWIGAFPGV 188
L+R H + YAL K + + + ++ ++ + H+ +L +P V
Sbjct: 188 LDRYHYNFEEYALAKMRILQNQTEEDAFIYWGEDEFVSRYVMMHQPMPMHLLPFLTYPQV 247
Query: 189 -----KIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVE 243
K D FE G + + + + G HN NA A S+ L IGV +
Sbjct: 248 GSAADKSDDNMMRLHFE----GKSFEFPIDQLALQGPHNLQNAMAA--SIAALHIGVSED 301
Query: 244 ALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQA 303
L +E PHR++ V + GV +++DSKATN+ +T L + V++LGG+
Sbjct: 302 VLTRALEDFVNVPHRLEKVGV-LDGVRYINDSKATNISSTYYALRTMTT-PYVLILGGED 359
Query: 304 K 304
K
Sbjct: 360 K 360
>gi|294778000|ref|ZP_06743434.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Bacteroides
vulgatus PC510]
gi|294448058|gb|EFG16624.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Bacteroides
vulgatus PC510]
Length = 444
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 147/306 (48%), Gaps = 30/306 (9%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
L G ++SE++FA + + K++ +TG+NGK+T + + + G+ + GN+G
Sbjct: 83 LKSQGTPIISEIEFAGRYT--NAKMICITGSNGKTTTTSLIYHIFKKAGMNVGLAGNIGQ 140
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDHLERHK-T 138
L+ C + V+E+SS+Q++ N Y F ++V++N+TPDHL+R+
Sbjct: 141 SLAYQVAEC--------NYDYYVIELSSFQLD--NMYKFHANIAVLMNITPDHLDRYDHQ 190
Query: 139 MKNYALTKCHLFSHMVNTKLGLL----PFGNQHLNE-AIKGHRFNLAWIGAFPGVKIDTE 193
M+NY K + + + P + L++ I GH + A G E
Sbjct: 191 MQNYVDAKFRIIQNQTPDDAFIFWNDDPIIQRELHKYGIHGHYYPFAERKE-EGTAAYVE 249
Query: 194 AKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILR 253
F P + ++ + + G HN N+ A +S L G+ E + + +
Sbjct: 250 QDKVYFTEP---IAFNMEQEELALTGTHNLFNSMAAGISA-NL-AGIRKECIREALGDFK 304
Query: 254 TPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNG 313
HR++ V R ++GV +++DSKATN+ + L +K K +++LGG+ K G + N
Sbjct: 305 GVEHRLEKVCR-VRGVDYINDSKATNVNSCWYALQSMKT-KTILILGGKDK---GNDYNE 359
Query: 314 FEKLIE 319
L++
Sbjct: 360 IADLVK 365
>gi|150003965|ref|YP_001298709.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Bacteroides
vulgatus ATCC 8482]
gi|149932389|gb|ABR39087.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Bacteroides
vulgatus ATCC 8482]
Length = 444
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 147/306 (48%), Gaps = 30/306 (9%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
L G ++SE++FA + + K++ +TG+NGK+T + + + G+ + GN+G
Sbjct: 83 LKSQGTPIISEIEFAGRYT--NAKMICITGSNGKTTTTSLIYHIFKKAGMNVGLAGNIGQ 140
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDHLERHK-T 138
L+ C + V+E+SS+Q++ N Y F ++V++N+TPDHL+R+
Sbjct: 141 SLAYQVAEC--------NYDYYVIELSSFQLD--NMYKFHANIAVLMNITPDHLDRYDHQ 190
Query: 139 MKNYALTKCHLFSHMVNTKLGLL----PFGNQHLNE-AIKGHRFNLAWIGAFPGVKIDTE 193
M+NY K + + + P + L++ I GH + A G E
Sbjct: 191 MQNYVDAKFRIIQNQTPDDAFIFWNDDPIIQRELHKYGIHGHYYPFAERKE-EGTAAYVE 249
Query: 194 AKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILR 253
F P + ++ + + G HN N+ A +S L G+ E + + +
Sbjct: 250 QDKVYFTEP---IAFNMEQEELALTGTHNLFNSMAAGISA-NL-AGIRKECIREALGDFK 304
Query: 254 TPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNG 313
HR++ V R ++GV +++DSKATN+ + L +K K +++LGG+ K G + N
Sbjct: 305 GVEHRLEKVCR-VRGVDYINDSKATNVNSCWYALQSMKT-KTILILGGKDK---GNDYNE 359
Query: 314 FEKLIE 319
L++
Sbjct: 360 IADLVK 365
>gi|67459026|ref|YP_246650.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Rickettsia
felis URRWXCal2]
gi|75536538|sp|Q4ULT8.1|MURD_RICFE RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|67004559|gb|AAY61485.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Rickettsia felis
URRWXCal2]
Length = 449
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 125/256 (48%), Gaps = 22/256 (8%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
++S++D + +++ +AVTGTNGKST + +LN G++ V GN+G P +A
Sbjct: 90 IISDIDLLFEK-SKNLNFIAVTGTNGKSTTTALISHILNSNGLDYPVAGNIGVPALQA-- 146
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
+SK + ++E+SS+Q+++ K F ++V+LN+TPDHL+RH+ M Y K
Sbjct: 147 -----KASKDGY---ILELSSFQLDLV-KTFTAKIAVLLNITPDHLDRHQDMTGYIAAKS 197
Query: 148 HLFSHMVNTKLGLLPFGNQHLNEAI----KGHRFNLAWIGAFPGVKIDTEAKTASFEVPA 203
+F M + N + E + R L F KI + +
Sbjct: 198 KIFDRMDKDSYAAINIDNYYCREIFMLLQQEQRIKLI---PFSVTKILKNGISVVGDKIN 254
Query: 204 VGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVH 263
+S N + G HN N +AA + IGV+ + + +I ++ PHRMQ +
Sbjct: 255 DNDISYKLPFNKNLQGTHNCEN--IAASYAVAKIIGVESKKILESISSFQSLPHRMQYIG 312
Query: 264 RDIQGVTWVDDSKATN 279
I + + +DSKATN
Sbjct: 313 S-INNIGFYNDSKATN 327
>gi|392540297|ref|ZP_10287434.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Pseudoalteromonas
piscicida JCM 20779]
Length = 440
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 143/290 (49%), Gaps = 28/290 (9%)
Query: 18 LACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGN 77
+A + G V+ +++ A++ R ++AVTG+NGKSTVVT ++L G++ +GGN
Sbjct: 88 VAAAIAEGVEVIGDIELFARLNTR--PVIAVTGSNGKSTVVTLATEVLKAAGLKVGLGGN 145
Query: 78 LGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK 137
+G + L + V V+E+SS+Q+E + C + +++LN+T DH++R+
Sbjct: 146 IGTSV---------LSLLEQPHDVYVLELSSFQLETTHSLACLS-AMILNITEDHMDRYP 195
Query: 138 TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWI-GAFPGVKIDTEAKT 196
+ Y K ++ H+ + H A G +++ G F + ID E
Sbjct: 196 DFQAYIEAKQRIYQHVEHIVFN----AEDHYTFAQHGQGSSVSLTEGDFHLMTIDGEPHF 251
Query: 197 ASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPP 256
A + P L + + ++GRHN NA + + + +A S P
Sbjct: 252 AHKQTPL------LPVKTLAMVGRHNQFNALAVLALLAPMQL--PKQAFASAFASFTGLP 303
Query: 257 HRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDL-KGHKCVILL-GGQAK 304
HR Q+V D+ GV + +DSKATN+ +T + L G K +IL+ GG AK
Sbjct: 304 HRCQLV-ADVAGVRYFNDSKATNVGSTVAAIDSLASGRKNIILIVGGDAK 352
>gi|160873536|ref|YP_001552852.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Shewanella
baltica OS195]
gi|378706777|ref|YP_005271671.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Shewanella baltica
OS678]
gi|418025227|ref|ZP_12664207.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Shewanella baltica
OS625]
gi|160859058|gb|ABX47592.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Shewanella baltica
OS195]
gi|315265766|gb|ADT92619.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Shewanella baltica
OS678]
gi|353535640|gb|EHC05202.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Shewanella baltica
OS625]
Length = 439
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 86/281 (30%), Positives = 134/281 (47%), Gaps = 40/281 (14%)
Query: 34 FAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALP 93
FA ++ R ++ +TG+NGKSTV T VG+M GI VGGN+G P AL
Sbjct: 100 FAREIADRKPCVIGITGSNGKSTVTTLVGEMAREAGIAVAVGGNIGVP---------ALD 150
Query: 94 SSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLF--S 151
+ V+E+SS+Q+E + C V+ LN++ DH++R+ + Y K L+ S
Sbjct: 151 LLHENADLFVLELSSFQLETTHSLKC-VVATCLNISEDHMDRYSDIAAYREAKLRLYKQS 209
Query: 152 HMV----NTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVV 207
V + KL + P E + + F LA A D++ S E+
Sbjct: 210 RAVLFNRDDKLTVPP-------EPMNQNSFGLAAPEADEWGISDSKIYHGSSEI------ 256
Query: 208 SQLQLHNMKVMGRHNYHN--AAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRD 265
+ + + ++G HN+ N AA+A + V +GVD + + HR ++V
Sbjct: 257 --MPITEVSLIGSHNHANLLAAMALVDV----VGVDKQVMAKVARSFTGLSHRCEVVGIK 310
Query: 266 IQGVTWVDDSKATNLEATCTGLMDLKGH--KCVILLGGQAK 304
GVT+V+DSKATN+ AT L L H +++ GG K
Sbjct: 311 -NGVTYVNDSKATNVGATVAALDGLSDHLGDIILIAGGDGK 350
>gi|417825623|ref|ZP_12472211.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HE48]
gi|422308334|ref|ZP_16395485.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
CP1035(8)]
gi|340047108|gb|EGR08038.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HE48]
gi|408617803|gb|EKK90908.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
CP1035(8)]
Length = 440
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 97/324 (29%), Positives = 153/324 (47%), Gaps = 53/324 (16%)
Query: 2 WML-WLFLLEFQLKATGLAC-------LLQSGKRVMSELD-FAAQVIPRSIKILAVTGTN 52
W L WL + + G+A +L +G V+ +++ FA V ++A+TG+N
Sbjct: 61 WNLEWLLNADLVVTNPGIALATPEIQQVLAAGIPVVGDIELFAWHV---DTPVIAITGSN 117
Query: 53 GKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQME 112
GKSTV G + N +G++A VGGN+G P AL P ++ V+E+SS+Q+E
Sbjct: 118 GKSTVTDLSGVLANAVGVKAAVGGNIGVP---------ALDLISPDVELYVLELSSFQLE 168
Query: 113 IPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSH----MVNT-KLGLLPFGNQH 167
+ + LNL+ DH++R++ M++Y K +F H +VN P H
Sbjct: 169 TTSSLKL-KAAAFLNLSEDHMDRYQGMEDYRQAKLRIFDHAETAVVNADDTQTFPDHAAH 227
Query: 168 LNEAIKG----HRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNY 223
L G +F+LA + EA A E + ++GRHN
Sbjct: 228 LQVVTFGVEQAAQFSLAQHQGREYLFARDEAVMACAE--------------LSLVGRHNV 273
Query: 224 HN--AAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLE 281
N +A L G++ + ++AL S + HR Q+V D G+ WV+DSKATN+
Sbjct: 274 ANVLTVLALLDSAGVNFRLALDALKSYTGL----THRCQVV-ADNHGIKWVNDSKATNVA 328
Query: 282 ATCTGLMDLKGH-KCVILLGGQAK 304
+T L LK + +L+GG K
Sbjct: 329 STLAALSGLKIEGQLYLLVGGVGK 352
>gi|91228512|ref|ZP_01262434.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Vibrio
alginolyticus 12G01]
gi|91187946|gb|EAS74256.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Vibrio
alginolyticus 12G01]
Length = 437
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 154/325 (47%), Gaps = 57/325 (17%)
Query: 18 LACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGN 77
+ +L G V+ +++ A + + ++A+TG+NGKSTV G M N G++ VGGN
Sbjct: 85 IQAVLAKGTAVVGDIELFAWAVQK--PVIAITGSNGKSTVTDLTGVMANAAGLDVGVGGN 142
Query: 78 LGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK 137
+G P AL + + V+E+SS+Q+E + + LNL+ DH++R++
Sbjct: 143 IGVP---------ALDLLEQDADLYVLELSSFQLETTSSLKL-KAAAFLNLSEDHMDRYQ 192
Query: 138 TMKNYALTKCHLFSHMV-------------NTKLGLLPFG--NQHLNEAIKGHRFNLAWI 182
M +Y K +F+H + ++ L+ FG NQ + G+R W+
Sbjct: 193 GMSDYRQAKLRIFNHAALAVVNRDDQETFPDAEMPLVTFGSDNQDFGLEVDGNR---TWL 249
Query: 183 GAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDV 242
+D + + + +K++G+HN NA VA + D+
Sbjct: 250 -------LDHGQRVVASD-------------ELKLVGKHNLSNALVALALLKAADVNYH- 288
Query: 243 EALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGH-KCVILLGG 301
+ALN T++ HR Q+V D QGV WV+DSKATN+ +T L L+ K +L+GG
Sbjct: 289 KALN-TLKNYTGLTHRCQVV-ADNQGVKWVNDSKATNIASTMAALSGLESTGKLYLLVGG 346
Query: 302 QAKVLNGQESNGFEKLIEPLNHHRC 326
K G + + + + LN C
Sbjct: 347 VGK---GADFSPLKPIFATLNLQLC 368
>gi|445062049|ref|ZP_21374491.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Brachyspira
hampsonii 30599]
gi|444506568|gb|ELV06888.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Brachyspira
hampsonii 30599]
Length = 471
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 140/285 (49%), Gaps = 26/285 (9%)
Query: 27 RVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAA 86
+++ E++FA +P +AVTGT+GK+T VT V ++++ +A + GN+GN S+
Sbjct: 111 KIIGEIEFAYNFLPNR-NYIAVTGTDGKTTTVTLVHKIISSYK-KARLLGNVGNTFSK-- 166
Query: 87 FHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTK 146
+ S + ++E+SS+Q+E K F ++ VLN+ DHL+R+K +++Y TK
Sbjct: 167 -EIETIESDED----IILELSSFQLETVEK-FHAHIAAVLNIAEDHLDRYKDIEDYFNTK 220
Query: 147 CHLFSHMVNTKLGLLPFGN-------QHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASF 199
++ + +L + N LN K + F + + E +
Sbjct: 221 KNIAINQNKNDFLILNYDNIYTNIWYNELNYNCKMKLLTFSLKSKFATIYYNEEDDCIYY 280
Query: 200 EVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRM 259
E + + N KV+G+HN N A L L DI D + + R HR+
Sbjct: 281 ENQKL-----FSIANRKVIGKHNIANILAAVLICLKDDIPAD--HIEKAVNNFRGIEHRL 333
Query: 260 QIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
++V +I GV +++DSKAT++ + + L ++++GG+ K
Sbjct: 334 ELV-AEINGVKYINDSKATSMNSVMSALKSF-DKDIILIMGGRNK 376
>gi|397169231|ref|ZP_10492666.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Alishewanella
aestuarii B11]
gi|396089311|gb|EJI86886.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Alishewanella
aestuarii B11]
Length = 443
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 128/263 (48%), Gaps = 21/263 (7%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
++A+TG+NGKSTV ML GI+A GN+G P+ +A ++P +V V+
Sbjct: 110 VVAITGSNGKSTVTRLTEAMLQQSGIKALAAGNIGLPVLDAL--------AEPSAEVYVL 161
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFG 164
E+SS+Q+E + + LN++ DHL+R+ + +YA K ++ H + L +
Sbjct: 162 ELSSFQLETTDSLQL-VAAANLNVSADHLDRYNDLADYAAAKQRIYQH---SALAVYNAE 217
Query: 165 NQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYH 224
+ A G R L+ G I + E V L + + + G+HN
Sbjct: 218 DNLTLPATSGPRLGLSLQDTGSGYGIVQHQQQ---EYLLVAGAPLLPVSELSLFGKHNQF 274
Query: 225 NAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATC 284
NA AA L G EA+ +T++ R HR ++V + GV WV+DSK TN+ AT
Sbjct: 275 NALAAAALA--LAAGASREAIATTLKTFRGLAHRCELVL-ERNGVRWVNDSKGTNIGATL 331
Query: 285 TGLMDLKGH---KCVILLGGQAK 304
L L+ K +++ GG AK
Sbjct: 332 AALAGLRSSVKGKLILIAGGDAK 354
>gi|261867478|ref|YP_003255400.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
[Aggregatibacter actinomycetemcomitans D11S-1]
gi|365967276|ref|YP_004948838.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
[Aggregatibacter actinomycetemcomitans ANH9381]
gi|415769378|ref|ZP_11484166.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Aggregatibacter
actinomycetemcomitans D17P-2]
gi|416083718|ref|ZP_11586886.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Aggregatibacter
actinomycetemcomitans serotype b str. I23C]
gi|444347757|ref|ZP_21155580.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Aggregatibacter
actinomycetemcomitans serotype b str. S23A]
gi|261412810|gb|ACX82181.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|348010529|gb|EGY50566.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Aggregatibacter
actinomycetemcomitans serotype b str. I23C]
gi|348657485|gb|EGY75074.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Aggregatibacter
actinomycetemcomitans D17P-2]
gi|365746189|gb|AEW77094.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
[Aggregatibacter actinomycetemcomitans ANH9381]
gi|443548228|gb|ELT57524.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Aggregatibacter
actinomycetemcomitans serotype b str. S23A]
Length = 434
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 95/324 (29%), Positives = 151/324 (46%), Gaps = 61/324 (18%)
Query: 5 WLFLLEFQLKATGLA-------CLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTV 57
WL + + + GLA LQ+G V+ +++ + + I +A+TG+NGKSTV
Sbjct: 61 WLLESDLIVISPGLAVKTPEIQTALQAGVEVVGDIELFCREADKPI--VAITGSNGKSTV 118
Query: 58 VTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY 117
T V +M G+ +GGN+G P AL + + V+E+SS+Q+E Y
Sbjct: 119 TTLVAEMAKAAGLRVGMGGNIGIP---------ALSLLNQQHDLYVLELSSFQLE--TTY 167
Query: 118 FCPTV-SVVLNLTPDHLERHKTMKNYALTKCHLFSH----MVNTKLGL-LP--------- 162
V + VLN+T DH+ R+ +++Y K ++++H ++N + L LP
Sbjct: 168 SLKAVAATVLNVTEDHMNRYVDLQDYRHAKLNIYNHCQTAVINAEDALTLPTTQRPQKQV 227
Query: 163 -FGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRH 221
FG H + +K N ++ A+ EA A E MK+ GRH
Sbjct: 228 SFGENHADYWLKTEN-NKTYLMAYD------EAVLACDE--------------MKLTGRH 266
Query: 222 NYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLE 281
NY NA A G+++ + + + HR Q+ H GV W++DSKATN+
Sbjct: 267 NYMNALAAIALAQA--AGINLTGIRTALCAFGGLEHRFQVAHI-ADGVRWINDSKATNVG 323
Query: 282 ATCTGLMDLK-GHKCVILLGGQAK 304
+T L L+ K +LLGG K
Sbjct: 324 STVAALTGLQVAGKLHLLLGGDGK 347
>gi|323142004|ref|ZP_08076855.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
[Phascolarctobacterium succinatutens YIT 12067]
gi|322413536|gb|EFY04404.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
[Phascolarctobacterium succinatutens YIT 12067]
Length = 466
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 139/284 (48%), Gaps = 14/284 (4%)
Query: 23 QSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPL 82
Q G V+SE++ ++ I A+TGTNGK+T T VG+ML L + VGGN+G L
Sbjct: 99 QRGLEVISEVELGYRLYGGHIA--AITGTNGKTTTTTIVGEMLKRLPEPSAVGGNIGLAL 156
Query: 83 SEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNY 142
S+ S P+ E+SS+Q+E + FCP ++VVLNLTPDHLERH TM+ Y
Sbjct: 157 SKEV-------ESLPQDGWLAAELSSFQLEKVSS-FCPDIAVVLNLTPDHLERHHTMEAY 208
Query: 143 ALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVP 202
K ++F ++ +L + + + + L + ++ + +F +
Sbjct: 209 GEAKKNIFRQQGEVQVTVLNYDDPIVRTWGAETKGRLCYFSRKEKLQQGIYMQDGNFIIS 268
Query: 203 AVGVVSQL-QLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQI 261
G + + + + G HN N V A G GV + + + R+ HR++
Sbjct: 269 WDGKQETVCNISELHLFGGHNEEN--VLAAIACGFFAGVSISDMADVLRNFRSIEHRIEY 326
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKV 305
V I GV + +DSKATN ++T L K ++L GG K+
Sbjct: 327 VAT-IDGVPYYNDSKATNTDSTIKALEAFKDGHIILLAGGHDKL 369
>gi|148985270|ref|ZP_01818493.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
pneumoniae SP3-BS71]
gi|387757134|ref|YP_006064113.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae OXC141]
gi|418231770|ref|ZP_12858358.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA07228]
gi|418236068|ref|ZP_12862637.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA19690]
gi|419479539|ref|ZP_14019347.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA19101]
gi|419499230|ref|ZP_14038929.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA47597]
gi|147922468|gb|EDK73587.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
pneumoniae SP3-BS71]
gi|301799723|emb|CBW32288.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae OXC141]
gi|353888076|gb|EHE67852.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA07228]
gi|353893997|gb|EHE73742.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA19690]
gi|379573193|gb|EHZ38149.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA19101]
gi|379602284|gb|EHZ67055.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA47597]
gi|429317565|emb|CCP37349.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae SPN034156]
gi|429319107|emb|CCP32342.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae SPN034183]
gi|429320922|emb|CCP34316.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae SPN994039]
gi|429322742|emb|CCP30357.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae SPN994038]
Length = 446
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 141/297 (47%), Gaps = 27/297 (9%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L G V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LAKGIPVLTEVELAYLI--SEAPIIGITGSNGKTTTTTMIGEVLTAAGQHGLLSGNIGYP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A S K V+E+SS+Q+ + + F P ++V+ NL P H++ H +
Sbjct: 151 ASQVAQTA----SDKDTL---VMELSSFQL-MGVQEFHPEIAVITNLMPTHIDYHGSFSE 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEV 201
Y K ++ + M +L F NQ L + + + G ++ EV
Sbjct: 203 YVAAKWNIQNKMTAADFLVLNF-NQDLTSKTEATVVPFSTLEKVDGAYLEDGQLYFRGEV 261
Query: 202 PAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQI 261
+ + + V G HN N A+A ++V L GVD + + T+ HR+Q
Sbjct: 262 V-------MAANEIGVPGSHNVEN-ALATIAVAKLR-GVDNQTIKETLSAFGGVKHRLQF 312
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
V DI+GV + +DSK+TN+ AT L K V++ GG + N F++L+
Sbjct: 313 VD-DIKGVKFYNDSKSTNILATQKALSGFDNSKVVLIAGGLDR------GNEFDELV 362
>gi|357406920|ref|YP_004918844.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Methylomicrobium
alcaliphilum 20Z]
gi|351719585|emb|CCE25261.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Methylomicrobium
alcaliphilum 20Z]
Length = 458
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 134/275 (48%), Gaps = 49/275 (17%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+A+TG+NGKSTV T +G M G + VGGNLG P AL P ++ ++
Sbjct: 126 IVAITGSNGKSTVTTMLGAMAKEAGKKTAVGGNLGTP---------ALDLLAPDIELYIL 176
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLF----SHMVNTKLGL 160
E+SS+Q+E + + + VLN++PDHL+R+ + YA K +F + ++N L
Sbjct: 177 ELSSFQLE-RTEILNASAATVLNISPDHLDRYDNVAEYAREKQKIFRGTGAMVLNADDPL 235
Query: 161 LPFGNQHLNEAIKGHR-----------FNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQ 209
+ ++ A+ G + F+LAW G G + +
Sbjct: 236 V------IDMAVPGRKISTFSINSEAEFHLAWDG-HKGYLMQNHKRL------------- 275
Query: 210 LQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGV 269
+ L + + G H + A A LG IG+D +++ ++ + HRMQ V G+
Sbjct: 276 MMLDELPLEGLH--NAANALAAIALGTAIGLDEQSMCKALKKFKGLEHRMQRVAVK-NGI 332
Query: 270 TWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
TWV+DSKATN+ A C ++ + +++ GG AK
Sbjct: 333 TWVNDSKATNIGA-CVAALEGYTRQVILIAGGDAK 366
>gi|322378367|ref|ZP_08052823.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Helicobacter
suis HS1]
gi|321149224|gb|EFX43668.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Helicobacter
suis HS1]
Length = 423
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 93/294 (31%), Positives = 138/294 (46%), Gaps = 34/294 (11%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIK------ILAVTGTNGKSTVVTFVGQMLNHLGIEAFV 74
L+ + K + SE D+ + + K I+ ++GTNGK+T +G +L A V
Sbjct: 70 LVVASKHLCSEYDYIKGLWQTNRKHLPFPTIIFISGTNGKTTTARMLGLLLK--SSNAQV 127
Query: 75 GGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLE 134
GGN+G PL + + I KP + V ++E SS+ + N + P + ++L L+ DHL
Sbjct: 128 GGNIGIPLIDL-YTQIKAEQRKPPY-VWILETSSFTLHYTN-HLVPQIYILLPLSQDHLS 184
Query: 135 RHKTMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEA 194
H+ +NY V KL L F Q +GH F A + P VK
Sbjct: 185 WHENHENY-----------VEAKLKPLSFMQQ------EGHVFLHASLKDHPTVKALINP 227
Query: 195 KTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGV-DVEALNSTIEILR 253
F + + Q+ L KV + A+ ALSV L GV D + LN+ +
Sbjct: 228 PNLIFYQDSKHLAKQMGLQISKVRFEEPFLLDALLALSVAKLYSGVADYDLLNTYM---- 283
Query: 254 TPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLN 307
PHR++I Q TWVDDSKATN++AT L KG ++LGG K ++
Sbjct: 284 IQPHRIEIFLDQDQN-TWVDDSKATNIDATLKALDRFKGCYIHLILGGDTKGMD 336
>gi|410944696|ref|ZP_11376437.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Gluconobacter
frateurii NBRC 101659]
Length = 448
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 134/288 (46%), Gaps = 44/288 (15%)
Query: 25 GKRVMSELDFAAQVIPRS---IKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
G +++S+ + + + ++ + AVTGTNGKST + +L G+ GGNLG
Sbjct: 91 GIQILSDAELLYRAVRKAGSQARFAAVTGTNGKSTTTALLAHLLQSAGVPCAAGGNLGT- 149
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
+ALP P V V+E+SSY +E + + T + +LN+TPDHL+RH M
Sbjct: 150 ------ASLALPL-LPDNGVYVIEMSSYMLERLDDFHAST-ACLLNITPDHLDRHGDMDG 201
Query: 142 YALTKCHLFSHMVNTKLGLLPFGN---QHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTAS 198
YA K H+F +M + L + + Q + + + + + +D +A
Sbjct: 202 YAAAKAHVFDNMTSDDLAAIGQDDPWCQKIADDVAPQGVTVTF--------LDPDA---- 249
Query: 199 FEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHR 258
VP + + GRHN N VAA + +G+ + + + HR
Sbjct: 250 --VP--------EFVGDALPGRHNLQN--VAAAWAMARHLGLSDDDIRKGLASFPGLEHR 297
Query: 259 MQ-IVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKV 305
+Q I RD GV +V+DSKATN EA L + + + + GG AK
Sbjct: 298 LQKIAERD--GVAFVNDSKATNAEAASKALGSYE--RVMWIAGGTAKA 341
>gi|424660897|ref|ZP_18098144.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HE-16]
gi|408049959|gb|EKG85139.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HE-16]
Length = 440
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 96/324 (29%), Positives = 152/324 (46%), Gaps = 53/324 (16%)
Query: 2 WML-WLFLLEFQLKATGLACL-------LQSGKRVMSELD-FAAQVIPRSIKILAVTGTN 52
W L WL + + G+A + L +G V+ +++ FA V ++A+TG+N
Sbjct: 61 WNLEWLLNADLVVTNPGIALVTPEIQQVLAAGIPVVGDIELFAWHV---DTPVIAITGSN 117
Query: 53 GKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQME 112
GKSTV G + N G++A VGGN+G P AL P ++ V+E+SS+Q+E
Sbjct: 118 GKSTVTDLSGVLANAAGVKAAVGGNIGVP---------ALDLISPDVELYVLELSSFQLE 168
Query: 113 IPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSH----MVNT-KLGLLPFGNQH 167
+ + LNL+ DH++R++ M++Y K +F H +VN P +H
Sbjct: 169 TTSSLKL-KAAAFLNLSEDHMDRYQGMEDYRQAKLRIFDHAETAVVNADDTQTFPDQAEH 227
Query: 168 LNEAIKG----HRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNY 223
L G +F +A + EA A E + ++GRHN
Sbjct: 228 LQVVTFGVEQAAQFTVAQHQGHEYLFARDEAVMACAE--------------LSLVGRHNV 273
Query: 224 HN--AAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLE 281
N +A L G++ + ++AL S + HR Q+V D G+ WV+DSKATN+
Sbjct: 274 ANVLTVLALLDSAGVNFRLALDALKSYTGL----THRCQVV-ADNHGIKWVNDSKATNVA 328
Query: 282 ATCTGLMDLK-GHKCVILLGGQAK 304
+T L LK + +L+GG K
Sbjct: 329 STLAALSGLKIAGQLYLLVGGVGK 352
>gi|118602749|ref|YP_903964.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Candidatus Ruthia
magnifica str. Cm (Calyptogena magnifica)]
gi|118567688|gb|ABL02493.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Candidatus Ruthia
magnifica str. Cm (Calyptogena magnifica)]
Length = 433
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 140/267 (52%), Gaps = 25/267 (9%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+ +TG+NGKSTV + QM+ + G++ +GGN+G P+ C+ K + V+
Sbjct: 103 IIGITGSNGKSTVTQLLTQMIINAGMQVAMGGNIGTPV----LDCL-----NEKIEYYVL 153
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFG 164
E+SSYQ++ + + V VVLN+TPDHL+R++ K+Y +K L+ H + +
Sbjct: 154 ELSSYQLDYSH-HLNLIVGVVLNITPDHLDRYQNFKHYINSKLSLYQHCQHLVI------ 206
Query: 165 NQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAV--GVVSQLQLHNMKVMGRHN 222
+L+E + + N G + D + + G + ++ ++++G HN
Sbjct: 207 --NLDEPLTPPKVNAKCFGISIPKQADDFGTVTCHDTYYLLKGDNVLMSINEVQLIGEHN 264
Query: 223 YHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEA 282
N +AAL+ LG I + + ++ +I+ + HR++ V + Q + + +DSKATN +
Sbjct: 265 TRN-ILAALA-LGDQIRLPIISMIQSIKNFKGLEHRLEWVAKK-QNIDYYNDSKATNAIS 321
Query: 283 TCTGLMDL--KGHKCVILLGGQAKVLN 307
T T + L K V++LGG AK N
Sbjct: 322 TITAIQALMRKHQNIVLILGGIAKQEN 348
>gi|423282438|ref|ZP_17261323.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides
fragilis HMW 615]
gi|404582006|gb|EKA86701.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides
fragilis HMW 615]
Length = 444
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 151/307 (49%), Gaps = 34/307 (11%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
L + G ++SE++FA + K++ +TG+NGK+T + + + G+ + GN+G
Sbjct: 82 LREQGTPIISEIEFAGRYT--DAKMICITGSNGKTTTTSLIYHIFKSAGLNVGLAGNIGK 139
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDHLERHK-T 138
L AL ++ K V+E+SS+Q++ N Y F ++V++N+TPDHL+R+
Sbjct: 140 SL--------ALQVAEEKHDYYVIELSSFQLD--NMYNFRADIAVLMNITPDHLDRYDHC 189
Query: 139 MKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGH--RFNLAWIGAFPGVKIDTEAKT 196
M+NY K + + + + + + + H R +L +P I E
Sbjct: 190 MQNYINAKFRITQNQTSEDAFIFWNDDPIIKRGLDKHGIRAHL-----YPFSAIKEEGSI 244
Query: 197 ASFEVPAVGVVS----QLQLHNMKVMGRHNYHNAAVAALSV-LGLDIGVDVEALNSTIEI 251
A E V + ++ + + G+HN +N+ A +S L G+ E + +
Sbjct: 245 AYVEDHEVVITEPIAFNMEQEQLALTGQHNLYNSLAAGISANLA---GITKEDIRKALSD 301
Query: 252 LRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQES 311
+ HR++ V R ++G+ +++DSKATN+ + L + K V++LGG+ K G +
Sbjct: 302 FQGVEHRLEKVAR-VRGIDFINDSKATNVNSCWYALQSMTT-KTVLILGGKDK---GNDY 356
Query: 312 NGFEKLI 318
E+L+
Sbjct: 357 TEIEELV 363
>gi|416073893|ref|ZP_11584356.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Aggregatibacter
actinomycetemcomitans serotype b str. SCC1398]
gi|444338035|ref|ZP_21151921.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Aggregatibacter
actinomycetemcomitans serotype b str. SCC4092]
gi|348007114|gb|EGY47456.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Aggregatibacter
actinomycetemcomitans serotype b str. SCC1398]
gi|443545839|gb|ELT55581.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Aggregatibacter
actinomycetemcomitans serotype b str. SCC4092]
Length = 434
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 95/324 (29%), Positives = 151/324 (46%), Gaps = 61/324 (18%)
Query: 5 WLFLLEFQLKATGLA-------CLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTV 57
WL + + + GLA LQ+G V+ +++ + + I +A+TG+NGKSTV
Sbjct: 61 WLLESDLIVISPGLAVKTPEIQTALQAGVEVVGDIELFCREADKPI--VAITGSNGKSTV 118
Query: 58 VTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY 117
T V +M G+ +GGN+G P AL + + V+E+SS+Q+E Y
Sbjct: 119 TTLVAEMAKAAGLRVGMGGNIGIP---------ALSLLNQQHDLYVLELSSFQLE--TTY 167
Query: 118 FCPTV-SVVLNLTPDHLERHKTMKNYALTKCHLFSH----MVNTKLGL-LP--------- 162
V + VLN+T DH+ R+ +++Y K ++++H ++N + L LP
Sbjct: 168 SLKVVAATVLNVTEDHMNRYVDLQDYRHAKLNIYNHCQTAVINAEDALTLPTTQRPQKQV 227
Query: 163 -FGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRH 221
FG H + +K N ++ A+ EA A E MK+ GRH
Sbjct: 228 SFGENHADYWLKTEN-NKTYLMAYD------EAVLACDE--------------MKLTGRH 266
Query: 222 NYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLE 281
NY NA A G+++ + + + HR Q+ H GV W++DSKATN+
Sbjct: 267 NYMNALAAIALAQA--AGINLTGIRTALCAFGGLEHRFQVAHI-ADGVRWINDSKATNVG 323
Query: 282 ATCTGLMDLK-GHKCVILLGGQAK 304
+T L L+ K +LLGG K
Sbjct: 324 STVAALTGLQVAGKLHLLLGGDGK 347
>gi|51473598|ref|YP_067355.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Rickettsia
typhi str. Wilmington]
gi|383752377|ref|YP_005427477.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Rickettsia
typhi str. TH1527]
gi|383843214|ref|YP_005423717.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Rickettsia
typhi str. B9991CWPP]
gi|60390366|sp|Q68WW9.1|MURD_RICTY RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|51459910|gb|AAU03873.1| D-glutamate ligase [Rickettsia typhi str. Wilmington]
gi|380759020|gb|AFE54255.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Rickettsia
typhi str. TH1527]
gi|380759861|gb|AFE55095.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Rickettsia
typhi str. B9991CWPP]
Length = 457
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 140/277 (50%), Gaps = 23/277 (8%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
++S++D + +++K +A+TGTNGKST + +LN G++ V GN+G P +A
Sbjct: 90 IISDIDLLFEK-SKNLKFIAITGTNGKSTTAALISHILNSNGLDYTVAGNIGVPALQA-- 146
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
+SK + V+E+SS+Q+++ K F V+V+LN+TPDHL+R++ M Y K
Sbjct: 147 -----KASKDGY---VLELSSFQLDLV-KIFTVKVAVLLNITPDHLDRYQDMNGYIAAKA 197
Query: 148 HLFSHMVNTKLGLLPFGNQHLNEA-IKGHRFNLAWIGAFPGVKI-DTEAKTASFEVPAVG 205
+F M ++ N + + + R L + F KI + ++
Sbjct: 198 KIFDRMDKDSYAVINIDNDYCRKIFLLLQREQLIKLIPFSVTKILNNGISIVDDKIHDNN 257
Query: 206 VVSQLQLHNMKVMGRHNYHN-AAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHR 264
+ +L L N + G HN N AA A+S + IGV+ + + +I ++ HRMQ +
Sbjct: 258 LTYKLPL-NKNLQGLHNCENIAASYAVSKI---IGVESKKILESISSFQSLHHRMQYIGS 313
Query: 265 DIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGG 301
I +++ +DSKATN + L +K + L G
Sbjct: 314 -INNISFYNDSKATN---AISALQSIKALDNIYWLAG 346
>gi|167040634|ref|YP_001663619.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
[Thermoanaerobacter sp. X514]
gi|300914675|ref|ZP_07131991.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Thermoanaerobacter
sp. X561]
gi|307724091|ref|YP_003903842.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Thermoanaerobacter
sp. X513]
gi|226722952|sp|B0K3H2.1|MURD_THEPX RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|166854874|gb|ABY93283.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Thermoanaerobacter
sp. X514]
gi|300889610|gb|EFK84756.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Thermoanaerobacter
sp. X561]
gi|307581152|gb|ADN54551.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Thermoanaerobacter
sp. X513]
Length = 454
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 151/298 (50%), Gaps = 34/298 (11%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
++ E++FA + I A+TGTNGK+T + +G+M + G + +V GN+G PL A
Sbjct: 95 LLGEVEFAYRF--SKAPIYAITGTNGKTTTTSLLGEMFKNTGRKVYVAGNIGYPLIYAV- 151
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
+ +++ F VA E+SS+Q+E K F P +S ++N+TPDHL+RHKT +NY K
Sbjct: 152 ----MEAAEDDFIVA--EISSFQLETI-KEFKPKISCIINITPDHLDRHKTFENYRDIKG 204
Query: 148 HLFSHMVNTKLGLLPFG--------NQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASF 199
+F + + +L + N+ R +L GA+ K S
Sbjct: 205 RIFENQREDEYTVLNYDDPVTWSLKNKAKCRVFPFSRKSLLENGAY--------IKDGSI 256
Query: 200 EVPAVGVVSQ-LQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHR 258
+ G + + + + + G HN N A+AA SV L G+ + + +T++ + HR
Sbjct: 257 YISVNGNAEKIIDIEEIYIPGEHNLEN-ALAASSVAYLS-GISADVIANTLKTFKGVEHR 314
Query: 259 MQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEK 316
++ V +I GV + +DSK TN +A+ + LK V++ GG K G E + F K
Sbjct: 315 IEFVD-EINGVKFYNDSKGTNPDASIKAIQALK-TPIVLIAGGYDK---GSEFDEFVK 367
>gi|78356087|ref|YP_387536.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Desulfovibrio
alaskensis G20]
gi|122063243|sp|Q313Q5.1|MURD_DESDG RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|78218492|gb|ABB37841.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Desulfovibrio
alaskensis G20]
Length = 447
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 134/277 (48%), Gaps = 35/277 (12%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
+M+E+D AA+ + + +LAVTGT+GK+T V+ ML G F+GGN+G PLSE
Sbjct: 110 IMAEIDLAARCV--TSPVLAVTGTSGKTTTVSLCAAMLRAAGKRVFLGGNIGTPLSE--- 164
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
+ + + + + V V+EVSS+Q++ P V+V++N++ +HL+ H M+ Y K
Sbjct: 165 YVLDVAAGEAPADVLVLEVSSFQLQTCTT-LRPEVAVLINISANHLDYHADMQEYLDAKF 223
Query: 148 HLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVV 207
LF+ L +L G + L + R+ LA A+ F+
Sbjct: 224 RLFALQGPDDLAVLQSGMEELAD-----RYALA-------------ARREFFD------- 258
Query: 208 SQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQ 267
+ + ++G HN N A L+ GV +E HR++ V ++
Sbjct: 259 AVRRFPRTALLGSHNMANIEAAWLACRAF--GVTQSQAAQAVEEFAPLEHRLEKVD-EVA 315
Query: 268 GVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
GV +V+DSK+T +++ L ++L GG+ K
Sbjct: 316 GVLFVNDSKSTTVDSMKAALESFD-RPVLLLCGGKWK 351
>gi|307244134|ref|ZP_07526252.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
[Peptostreptococcus stomatis DSM 17678]
gi|306492505|gb|EFM64540.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
[Peptostreptococcus stomatis DSM 17678]
Length = 454
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 97/321 (30%), Positives = 159/321 (49%), Gaps = 34/321 (10%)
Query: 18 LACLLQSGKRVMSELDFA-AQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGG 76
L L + GK V+SE++ A + ++IK + +TGTNGK+T + VG++ G++ +V G
Sbjct: 84 LVKLREMGKEVISEVELAYREGQEKNIKFIGITGTNGKTTTTSIVGEICKEAGLDTYVVG 143
Query: 77 NLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERH 136
N+GNP A A P + V V+E+SS+Q+E F P VS VLNLT DH+ RH
Sbjct: 144 NIGNPAISAVEE--AQPGA-----VLVIELSSFQLEAVYD-FRPEVSTVLNLTEDHMNRH 195
Query: 137 KTMKNYALTKCHLFSHMVNTKLGLLPF--------GNQHLNEAIKGHRFNLAWIGAFPGV 188
TM+NYA K ++F+ + +L + GN + R + G +
Sbjct: 196 HTMENYAKAKANIFAKQTPESVCVLNYDDPITRDMGNTCQARPVYFSRQSRPEAGIYLDD 255
Query: 189 KIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNST 248
+ A EV V ++ + G HN N ++AA+ L L G+D E +
Sbjct: 256 NKNIIAVKDGREVEIVNA------EDLSLPGGHNLEN-SMAAIG-LCLHFGIDKEIIKKV 307
Query: 249 IEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNG 308
+ + HR++ V+ + GV +V+DSK TN ++T + K +++ GG K
Sbjct: 308 LTTFKAVEHRLEYVNT-VNGVVYVNDSKGTNPDSTIKAVQSYK-TPIILIAGGYDK---- 361
Query: 309 QESNGFEKLIE-PLNHHRCVI 328
+ F +L + +N+ R V+
Sbjct: 362 --GSDFRELFDIAVNYVRTVL 380
>gi|434382206|ref|YP_006703989.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Brachyspira
pilosicoli WesB]
gi|404430855|emb|CCG56901.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Brachyspira
pilosicoli WesB]
Length = 463
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 149/285 (52%), Gaps = 24/285 (8%)
Query: 27 RVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAA 86
+V+ E++FA +IP ++VTGT+GK+T V + +++ +A + GN+GN S+
Sbjct: 108 KVIGEIEFAYNLIPDR-NYISVTGTDGKTTTVNLIYSIISSYK-KARLLGNVGNTFSKEV 165
Query: 87 FHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTK 146
S K + V+E+SS+Q+E + F +SV+LN+ DHL+R+K +++Y K
Sbjct: 166 -------ESIEKDEDIVLELSSFQLETVDN-FHSHISVILNIAEDHLDRYKDIEDYFNAK 217
Query: 147 CHLFSHMVNTKLGLL----PFGNQHLNEAIKGH--RFN-LAWIGAFPGVKIDTEAKTASF 199
++ + + +L + N++ NE IK FN L + + + ++
Sbjct: 218 KNITKNQNSNDFLILNYDNSYTNRYYNELIKTKDISFNVLTFSTKYREANLYYNSEDECL 277
Query: 200 EVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRM 259
A + S + K++G HN N + L+ + +I +E ++ + ++ HR+
Sbjct: 278 YYNAEKIFS---IAKRKLLGMHNIENILASVLACIKDNIP--IEYIDKAVNNFQSIEHRL 332
Query: 260 QIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
+ V ++I GV +++DSKAT++ A + L + ++++GG+ K
Sbjct: 333 EFV-KEIDGVRYINDSKATSMSAVMSALKSFDKN-IILIMGGRNK 375
>gi|325578823|ref|ZP_08148870.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Haemophilus
parainfluenzae ATCC 33392]
gi|325159647|gb|EGC71779.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Haemophilus
parainfluenzae ATCC 33392]
Length = 437
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 150/314 (47%), Gaps = 40/314 (12%)
Query: 5 WLFLLEFQLKATGLA-------CLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTV 57
WL + + + GLA L +G V+ +++ + + I + +TG+NGKSTV
Sbjct: 63 WLLESDIIVISPGLAVKIPEIQTALSAGVEVIGDIELFCRAATKPI--VGITGSNGKSTV 120
Query: 58 VTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY 117
T V +M GI+ +GGN+G P AL + V+E+SS+Q+E N
Sbjct: 121 TTLVYEMAKAAGIKVGMGGNIGIP---------ALSLLNEDCDLYVLELSSFQLETTNS- 170
Query: 118 FCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGL---LPFGNQHLNEAIKG 174
+ VLN+T DH++R+ +++Y K ++ + + L L FG N+A K
Sbjct: 171 LKAAAATVLNVTEDHMDRYVDLEDYRQAKLRIYYNAETAVVNLEDKLTFGEGE-NQAKK- 228
Query: 175 HRFNLAWIGAFPGVKIDTEAKTAS---FEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAAL 231
+ +F + D KT + + + V+ L ++GRHNY N + A
Sbjct: 229 -------VVSFAENQADYWLKTENGKQYLMAKEEVI--LPCDEAILVGRHNYMN--ILAA 277
Query: 232 SVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLK 291
+ L + +++EA+ + + HR Q+ ++ GV W++DSKATN+ +T L L
Sbjct: 278 TALAQAVDINLEAIRIALRQFKGLDHRFQLAYQ-TNGVRWINDSKATNVGSTVAALAGLY 336
Query: 292 GHKCV-ILLGGQAK 304
+ +LLGG K
Sbjct: 337 VEGTLHLLLGGDGK 350
>gi|452752897|ref|ZP_21952636.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [alpha
proteobacterium JLT2015]
gi|451959719|gb|EMD82136.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [alpha
proteobacterium JLT2015]
Length = 429
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 119/246 (48%), Gaps = 40/246 (16%)
Query: 44 KILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP-LSEAAFHCIALPSSKPKFQVA 102
++ +TGTNGKST + L G+ A +GGN+G P LS+ P V
Sbjct: 110 SVVGITGTNGKSTTTALIHHTLIEAGVPATLGGNIGEPILSQ---------RPAPAGGVY 160
Query: 103 VVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERH-KTMKNYALTKCHLFSHMVNTKLGLL 161
V+E+SSYQ+++ + C V+V+LN+TPDHL+R+ ++ YA +K LF + ++
Sbjct: 161 VLELSSYQIDLTHSLAC-DVAVLLNITPDHLDRYDDSVDAYAASKARLFQMQAAGGVAVI 219
Query: 162 PFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRH 221
G + A++ +R L F GV D Q + + G H
Sbjct: 220 -TGTDDYSRAVQANRAPL-----FEGVADD-------------------QPNWPALAGPH 254
Query: 222 NYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLE 281
N N A+AA +VL +G+ E L + HRM+ V D GV WV+DSKATN +
Sbjct: 255 NRQN-AIAAATVL-RALGLSEEELRAGFRSFGGLAHRMERVA-DRGGVLWVNDSKATNAD 311
Query: 282 ATCTGL 287
+ L
Sbjct: 312 SAAPAL 317
>gi|416103052|ref|ZP_11589107.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Aggregatibacter
actinomycetemcomitans serotype c str. SCC2302]
gi|444345346|ref|ZP_21153367.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Aggregatibacter
actinomycetemcomitans serotype c str. AAS4A]
gi|348008323|gb|EGY48599.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Aggregatibacter
actinomycetemcomitans serotype c str. SCC2302]
gi|443543103|gb|ELT53370.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Aggregatibacter
actinomycetemcomitans serotype c str. AAS4A]
Length = 434
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 95/324 (29%), Positives = 151/324 (46%), Gaps = 61/324 (18%)
Query: 5 WLFLLEFQLKATGLA-------CLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTV 57
WL + + + GLA LQ+G V+ +++ + + I +A+TG+NGKSTV
Sbjct: 61 WLLESDLIVISPGLAVKTPEIQTALQAGVEVVGDIELFCREADKPI--VAITGSNGKSTV 118
Query: 58 VTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY 117
T V +M G+ +GGN+G P AL + + V+E+SS+Q+E Y
Sbjct: 119 TTLVAEMAKAAGLRVGMGGNIGIP---------ALSLLNQQHDLYVLELSSFQLE--TTY 167
Query: 118 FCPTV-SVVLNLTPDHLERHKTMKNYALTKCHLFSH----MVNTKLGL-LP--------- 162
V + VLN+T DH+ R+ +++Y K ++++H ++N + L LP
Sbjct: 168 SLKAVAATVLNVTEDHINRYVDLQDYRHAKLNIYNHCQTAVINAEDALTLPTTQRPQKQV 227
Query: 163 -FGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRH 221
FG H + +K N ++ A+ EA A E MK+ GRH
Sbjct: 228 SFGENHADYWLKTEN-NKTYLMAYD------EAVLACDE--------------MKLTGRH 266
Query: 222 NYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLE 281
NY NA A G+++ + + + HR Q+ H GV W++DSKATN+
Sbjct: 267 NYMNALAAIALAQA--AGINLTGIRTALCAFGGLEHRFQVAHI-ADGVRWINDSKATNVG 323
Query: 282 ATCTGLMDLK-GHKCVILLGGQAK 304
+T L L+ K +LLGG K
Sbjct: 324 STVAALTGLQVAGKLHLLLGGDGK 347
>gi|395788418|ref|ZP_10467982.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bartonella
birtlesii LL-WM9]
gi|395408335|gb|EJF74946.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bartonella
birtlesii LL-WM9]
Length = 466
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 87/273 (31%), Positives = 133/273 (48%), Gaps = 30/273 (10%)
Query: 41 RSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKP--K 98
R + +A+TGTNGKST + +L +G + VGGN+G A+ + KP K
Sbjct: 119 RDVPFIAITGTNGKSTTTVLLAYLLEQMGYDVQVGGNIGT----------AILTLKPFVK 168
Query: 99 FQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKL 158
++ V+E SS+Q+++ PT+ V+LNLTPDH++RH +Y K L + +
Sbjct: 169 KRIYVIECSSFQIDL-TPSLQPTIGVLLNLTPDHIDRHGNFAHYVQAKKRLVFGAAHAVI 227
Query: 159 GLLPFGNQHLNEAI--KGHRFNLAWIGAF--PGVKIDTEAKTASFEVPAVGVVSQLQLHN 214
+ Q L + + +GH F G D EAK S +++ L +
Sbjct: 228 SVDDAVCQDLYQQLLDEGHSVEAVSKKNFVESGFYAD-EAKLFSVRQGRRQMLADLA--S 284
Query: 215 MKVM-GRHNYHNA--AVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTW 271
M + G HN NA A+A L VL + +N + + HRMQ VH+ + V +
Sbjct: 285 MPALRGSHNAQNALMALATLQVL----KITSPYMNKHLASYKGLAHRMQQVHK-MGSVLF 339
Query: 272 VDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
++DSKATN +AT L H ++GGQAK
Sbjct: 340 INDSKATNADATAPALSAF--HDIFWIVGGQAK 370
>gi|325299145|ref|YP_004259062.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Bacteroides
salanitronis DSM 18170]
gi|324318698|gb|ADY36589.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Bacteroides
salanitronis DSM 18170]
Length = 444
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 145/293 (49%), Gaps = 31/293 (10%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
L + G ++SE++FA + + K++ +TG+NGK+T + + + G+ + GN+G
Sbjct: 83 LREQGTPIISEIEFAGRYT--NAKMICITGSNGKTTTTSLIYHIFKKAGLNVGLAGNIGQ 140
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDHLERHK-T 138
L+ C + V+E+SS+Q++ N Y F ++V++N+TPDHL+R+
Sbjct: 141 SLAYQVAEC--------NYDYYVIELSSFQLD--NMYKFHANIAVLMNITPDHLDRYDYK 190
Query: 139 MKNYALTKCHLFSHMVNTKLGLL----PFGNQHLNE-AIKGHRFNLAWIGAFPGVKIDTE 193
M+NY K + + + + P + L++ I G + A G+ +E
Sbjct: 191 MQNYIDAKFRIIQNQTDNDAFVFWNDDPIIREELHKYGIHGQYYPFAEKRE-DGLAAFSE 249
Query: 194 AKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALS--VLGLDIGVDVEALNSTIEI 251
F P + ++ + + G HN N+ A +S + G+ EAL+
Sbjct: 250 QDKVYFTKP---IEFNMEQEELALTGTHNLFNSMAAGISANIAGIRKSCIREALSD---- 302
Query: 252 LRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
+ HR++ V R ++GV +++DSKATN+ + L +K K V++LGG+ K
Sbjct: 303 FKGVEHRLEKVAR-VRGVDYINDSKATNVNSCWYALKSMK-TKTVLILGGKDK 353
>gi|152998950|ref|YP_001364631.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Shewanella
baltica OS185]
gi|151363568|gb|ABS06568.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Shewanella baltica
OS185]
Length = 439
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 140/291 (48%), Gaps = 41/291 (14%)
Query: 25 GKRVMSELD-FAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLS 83
G V+ +++ FA ++ R ++ +TG+NGKSTV T VG+M GI VGGN+G P
Sbjct: 90 GIEVIGDVELFAREIADRKPCVIGITGSNGKSTVTTLVGEMAREAGIAVAVGGNIGVP-- 147
Query: 84 EAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYA 143
AL + V+E+SS+Q+E + C V+ LN++ DH++R+ + Y
Sbjct: 148 -------ALDLLHENADLFVLELSSFQLETTHSLKC-VVATCLNISEDHMDRYSDIAAYR 199
Query: 144 LTKCHLF--SHMV----NTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTA 197
K L+ S V + KL + P E + + F LA A D++
Sbjct: 200 EAKLRLYKQSRAVLFNRDDKLTVPP-------EPMNQNSFGLAAPEADEWGISDSKIYHG 252
Query: 198 SFEVPAVGVVSQLQLHNMKVMGRHNYHN--AAVAALSVLGLDIGVDVEALNSTIEILRTP 255
S E+ + + + ++G HN+ N AA+A + V +GVD + +
Sbjct: 253 SSEI--------MPITEVSLIGSHNHANLLAAMALVDV----VGVDKQIMAKVARSFTGL 300
Query: 256 PHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGH--KCVILLGGQAK 304
HR ++V GVT+V+DSKATN+ AT L L H +++ GG K
Sbjct: 301 SHRCEVVGIK-NGVTYVNDSKATNVGATVAALDGLSDHLGDIILIAGGDGK 350
>gi|423316134|ref|ZP_17294039.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bergeyella
zoohelcum ATCC 43767]
gi|405584407|gb|EKB58314.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bergeyella
zoohelcum ATCC 43767]
Length = 451
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 147/278 (52%), Gaps = 20/278 (7%)
Query: 14 KATGLACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAF 73
KA L + G R+ SE++FAA+ KI+A+TG+NGK+T + + +L + +
Sbjct: 84 KAGILQKIQAKGIRLSSEIEFAAEFT--DAKIIAITGSNGKTTTTSLIYHILKNAELHVG 141
Query: 74 VGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQM-EIPNKYFCPTVSVVLNLTPDH 132
+GGN+G ++ + + V+EVSS+Q+ +I N F P ++++LNL+PDH
Sbjct: 142 LGGNIGTSFAKQV--------ADENYDYFVLEVSSFQLDDIQN--FQPYIALLLNLSPDH 191
Query: 133 LERHK-TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKID 191
L+++ ++YAL K + + N + + ++ +E +K + K+D
Sbjct: 192 LDQYNYNYEDYALAKLRITENQKNHQFFIYNHEDEMTHELLKKIEVKAQTLPFSLNEKLD 251
Query: 192 TEAKTASFEVPAVGVVSQ--LQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTI 249
E A+ + V + + ++++ + ++G+HN N + A S++G + + E L + +
Sbjct: 252 -EGAYATVDKIFVKLEKEFSMKINELPLVGKHNVAN--ILAASMVGKLLHISDENLQNAL 308
Query: 250 EILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGL 287
+ HR+++ +I GV +++DSKATN+ A L
Sbjct: 309 MTFQAVEHRLELF-AEIDGVKYINDSKATNVNAAYYAL 345
>gi|261378423|ref|ZP_05982996.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Neisseria
cinerea ATCC 14685]
gi|269145199|gb|EEZ71617.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Neisseria
cinerea ATCC 14685]
Length = 445
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 141/287 (49%), Gaps = 26/287 (9%)
Query: 23 QSGKRVMSELDFAAQVI-PRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
Q+G V+ +++ A ++ R K++A+TG+NGK+TV + VG + G++ + GN+G P
Sbjct: 89 QNGGCVLGDIELLADIVNRRGDKVIAITGSNGKTTVTSLVGYLCIKCGLDTVIAGNIGTP 148
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
+ EA L K V V+E+SS+Q+E + PT + VLN++ DHL+R+ + +
Sbjct: 149 VLEA-----ELQREGKKADVWVLELSSFQLE-NTESLRPTAATVLNISEDHLDRYDDLLD 202
Query: 142 YALTKCHLFS----HMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTA 197
YA TK +F ++N + A+K + W E +T
Sbjct: 203 YAHTKAKIFRGDGVQVLNA--------DDAFCRAMKRAGREVKWFSLEHEADFWLERETG 254
Query: 198 SFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPH 257
+ G + ++ + G H + A V A L +G+ EAL ++ + PH
Sbjct: 255 CLK---QGDEDLIATQDIPLQGLH--NAANVMAAVALCEAVGLPREALLEHVKTFQGLPH 309
Query: 258 RMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
R++ + GV ++DDSK TN+ AT + L+ + ++LGG K
Sbjct: 310 RVEKIGEK-NGVVFIDDSKGTNVGATAAAIAGLQ-NPLFVILGGMGK 354
>gi|91201183|emb|CAJ74243.1| similar to UDP-N-acetylmuramoylalanine D-glutamate ligase
[Candidatus Kuenenia stuttgartiensis]
Length = 476
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 140/303 (46%), Gaps = 52/303 (17%)
Query: 46 LAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVE 105
+ VTG+NGKST T +G +L + +VGGN+G L + L KP + V+E
Sbjct: 132 IGVTGSNGKSTTTTLIGDILQQTSNKIWVGGNIGKSL------LLQLEEMKPA-DIVVLE 184
Query: 106 VSSYQME-IPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFG 164
+SS+Q+E + + P +S+V N++P+HL+RHK + +Y K ++ H + +L +
Sbjct: 185 LSSFQLESLSSIKKSPCISIVTNISPNHLDRHKDIDSYIHAKKNIILHQKQSDSAILNYD 244
Query: 165 NQHLNEAIKGHRFNLAWI--------GAF---PGVKIDTEAKTASFEVPAVGVVSQLQLH 213
+ L K + W GAF + I + T S +P V
Sbjct: 245 DTELRTWGKECYGRVLWYSTQQPVENGAFRENEHIVISIDGNTIS--IPCVS-------- 294
Query: 214 NMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVD 273
+K+ G HN HN V A S G + + + T+ HR++ V R+ +G+ + +
Sbjct: 295 KIKLPGDHNLHN--VLAASCATYLHGANKQTIEKTVTSFCGLEHRLEFV-REAKGIRYYN 351
Query: 274 DSKATNLEATCTGLMDLKGHKCVILLGG------------------QAKVLNGQESNGFE 315
DSKAT E+ +M K V++ GG +A VL G+ +N E
Sbjct: 352 DSKATTPESAIAAIMSFKN--SVLIAGGYDKGSDFEEFAAICSNYCKAVVLIGKTANKIE 409
Query: 316 KLI 318
+LI
Sbjct: 410 ELI 412
>gi|422911230|ref|ZP_16945856.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HE-09]
gi|341632036|gb|EGS56910.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HE-09]
Length = 440
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 148/329 (44%), Gaps = 63/329 (19%)
Query: 2 WML-WLFLLEFQLKATGLAC-------LLQSGKRVMSELD-FAAQVIPRSIKILAVTGTN 52
W L WL + + G+A +L +G V+ +++ FA V ++A+TG+N
Sbjct: 61 WNLEWLLNADLVVTNPGIALATPEIQQVLAAGIPVVGDIELFAWHV---DTPVIAITGSN 117
Query: 53 GKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQME 112
GKSTV G + N G++A VGGN+G P AL P ++ V+E+SS+Q+E
Sbjct: 118 GKSTVTDLSGVLANAAGVKASVGGNIGVP---------ALDLISPDVELYVLELSSFQLE 168
Query: 113 IPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAI 172
+ + LNL+ DH++R++ M++Y K +F H +
Sbjct: 169 TTSSLKL-KAAAFLNLSEDHMDRYQGMEDYRQAKLRIFDHAETAVV-------------- 213
Query: 173 KGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLH--------------NMKVM 218
N FP + T E A V+Q Q H + ++
Sbjct: 214 -----NADDTQTFPDHAAHLQVVTFGVEQAAQFTVAQHQGHEYLFARDEAVMACAELSLV 268
Query: 219 GRHNYHN--AAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSK 276
GRHN N +A L G++ + ++AL S + HR Q+V D G+ WV+DSK
Sbjct: 269 GRHNVANVLTVLALLDSAGVNFRLALDALKSYTGL----THRCQVV-ADNHGIKWVNDSK 323
Query: 277 ATNLEATCTGLMDLK-GHKCVILLGGQAK 304
ATN+ +T L LK + +L+GG K
Sbjct: 324 ATNVASTLAALSGLKIAGQLYLLVGGVGK 352
>gi|213963298|ref|ZP_03391555.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Capnocytophaga
sputigena Capno]
gi|213954160|gb|EEB65485.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Capnocytophaga
sputigena Capno]
Length = 447
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 151/296 (51%), Gaps = 37/296 (12%)
Query: 23 QSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPL 82
+ G R++SE++FA++ S+ I+ +TG+NGK+T Q+ G++ +GGN+G
Sbjct: 84 EKGIRIISEIEFASEYT-HSL-IVGITGSNGKTTTTLLTHQIFKDAGLQVGLGGNIGYSF 141
Query: 83 SEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK-TMKN 141
+E + + P + V+E+SS+Q++ ++F P ++V+LN+TPDHL+R+ +N
Sbjct: 142 AE------LVATENPPYY--VLEISSFQLD-GIEHFAPHIAVLLNITPDHLDRYDYKFEN 192
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWI----------GAF---PGV 188
Y +K + + + + + E ++ H + I GAF +
Sbjct: 193 YIASKFRIAMNQTENDYLIYDADDPVIEEWLQNHILKVKLIPFSIEKELPYGAFLKDNKI 252
Query: 189 KIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNST 248
I E +TA +++ + + + G+HN N A SV + + +L +
Sbjct: 253 HIMLENQTAE--------TTEIDVEEISLRGKHNIKNTMAA--SVAARLVNIRNNSLRDS 302
Query: 249 IEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
++ + HR++ V + ++GVT+V+DSKATN+ + L +K V ++GGQ K
Sbjct: 303 LKGFKGVDHRLEEV-KVVEGVTYVNDSKATNVNSVYFALDTIKT-PIVWIVGGQDK 356
>gi|312898962|ref|ZP_07758350.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Megasphaera
micronuciformis F0359]
gi|310620124|gb|EFQ03696.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Megasphaera
micronuciformis F0359]
Length = 454
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 136/281 (48%), Gaps = 15/281 (5%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V SE++ A V + T +TV+T G+++ G + VGGN+G LSE A
Sbjct: 98 VWSEVEVAVHVTDAEFIGITGTNGKTTTTVLT--GEIMKATGRQTVVGGNIGFGLSETAE 155
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
LPSS V V E+SS+Q+E+ + + +V+LNLTPDHL+RH TM+ Y K
Sbjct: 156 D---LPSS----AVVVAELSSFQLELTSSLKAKS-AVILNLTPDHLDRHHTMEAYGEAKK 207
Query: 148 HLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVV 207
+F + +L + + + + +I V + A + + G
Sbjct: 208 RIFLNQDKNDYAILNYDDSAVRAMASDLSGTVLYISVHGEVPVGAFAADGNLYIRMEGKD 267
Query: 208 SQL-QLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDI 266
+ L + ++ + G+HN N AAL L G ++ + + R HR++ V RD+
Sbjct: 268 TCLCKETDLHLFGKHNIQNCLAAAL--LTYCAGASIDVIRRVLTEFRGVEHRLEWV-RDV 324
Query: 267 QGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLN 307
+GV + +DSK TN +A+ L GH +++ GG K+ +
Sbjct: 325 KGVPYYNDSKGTNTDASEKALEAFSGH-LILIAGGHDKMTD 364
>gi|452992690|emb|CCQ95849.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Clostridium
ultunense Esp]
Length = 453
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/302 (30%), Positives = 147/302 (48%), Gaps = 39/302 (12%)
Query: 25 GKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSE 84
G V+++L+ A ++ P S +A+TGTNGK+T T VGQ N G V GN+G
Sbjct: 91 GIEVLTDLELAYRISPNS-NFIAITGTNGKTTTTTLVGQFFNKAGFTTHVAGNIG----- 144
Query: 85 AAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYAL 144
+ SSK V VVE SS+Q+E F P +S++LN+TPDHL H T+ NY
Sbjct: 145 VGILWDVVNSSKE--DVFVVEASSFQLE-NTVEFNPKISLILNITPDHLNWHNTLDNYIK 201
Query: 145 TKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAV 204
K +F + + +L + + L + NL W +D + +
Sbjct: 202 AKKKIFLNQAEDEYTILNYDDPLLKGMKDEIKANLTWFS------VDNKLSKGIYIENGY 255
Query: 205 GVVSQ-------LQLHNMKVMGRHNYHN--AAVAALSVLGLDIGVDVEALNSTIEILRTP 255
V+ ++ + +K++G+HN N A+VA ++GLDI V ++LRT
Sbjct: 256 VVIDDGDKAEKVIRTNEIKILGKHNLENVLASVAIGWIMGLDINV-------MKKVLRTF 308
Query: 256 P---HRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESN 312
P HR++ V I G+ + +DSK TN EA+ + ++ +++ GG K G E +
Sbjct: 309 PGVEHRIEYVDI-IDGIKFYNDSKGTNPEASIKAIEAVES-PIILIAGGHDK---GSEFD 363
Query: 313 GF 314
F
Sbjct: 364 NF 365
>gi|217971631|ref|YP_002356382.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Shewanella
baltica OS223]
gi|217496766|gb|ACK44959.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Shewanella baltica
OS223]
Length = 439
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 140/291 (48%), Gaps = 41/291 (14%)
Query: 25 GKRVMSELD-FAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLS 83
G V+ +++ FA ++ R ++ +TG+NGKSTV T VG+M GI VGGN+G P
Sbjct: 90 GIEVIGDVELFAREIADRKPCVIGITGSNGKSTVTTLVGEMAREAGIAVAVGGNIGVP-- 147
Query: 84 EAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYA 143
AL + V+E+SS+Q+E + C V+ LN++ DH++R+ + Y
Sbjct: 148 -------ALDLLHENADLFVLELSSFQLETTHSLKC-VVATCLNISEDHMDRYSDIAAYR 199
Query: 144 LTKCHLF--SHMV----NTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTA 197
K L+ S V + KL + P E + + F LA A D++
Sbjct: 200 EAKLRLYKQSRAVLFNRDDKLTVPP-------EPMNQNSFGLAAPEADEWGISDSKIYHG 252
Query: 198 SFEVPAVGVVSQLQLHNMKVMGRHNYHN--AAVAALSVLGLDIGVDVEALNSTIEILRTP 255
S E+ + + + ++G HN+ N AA+A + V +GVD + +
Sbjct: 253 SSEI--------MPITEVSLIGSHNHANLLAAMALVDV----VGVDKQIMAKVARSFTGL 300
Query: 256 PHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGH--KCVILLGGQAK 304
HR ++V GVT+V+DSKATN+ AT L L H +++ GG K
Sbjct: 301 SHRCEVVGIK-NGVTYVNDSKATNVGATVAALDGLSDHLGDIILIAGGDGK 350
>gi|253988592|ref|YP_003039948.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Photorhabdus
asymbiotica]
gi|253780042|emb|CAQ83203.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Photorhabdus
asymbiotica]
Length = 423
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/271 (32%), Positives = 138/271 (50%), Gaps = 41/271 (15%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+A+TG+NGKSTV + VG+M G + VGGN+G P AL K Q+ V+
Sbjct: 94 IIAITGSNGKSTVTSLVGEMAKAAGWQVGVGGNIGLP---------ALELLKQSCQLYVL 144
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERH-KTMKNYALTKCHLFSH----MVNTKLG 159
E+SS+Q+E + VLN+T DH++R+ + + Y K ++ +VN +
Sbjct: 145 ELSSFQLET-TYSLKAAAATVLNVTEDHMDRYPQGLSQYRAAKLRVYHQAKRCIVNVQDT 203
Query: 160 L-LP---FGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNM 215
L LP ++ ++ + + L AF +K+ ++ A+ E+
Sbjct: 204 LTLPETGMDSRCVSVGVDCGDYQLDSENAF--LKVHNQSLLAANEI-------------- 247
Query: 216 KVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDS 275
K+ GRHNY N VA L +G+ EA +T+ + HR Q+VH + GV W++DS
Sbjct: 248 KLTGRHNYVNGLVAL--ALADAVGIPREASLATLTVYPGLNHRFQLVHLN-NGVRWINDS 304
Query: 276 KATNLEATCTGL--MDLKGHKCVILLGGQAK 304
KATN+ +T L ++L+G +LLGG K
Sbjct: 305 KATNVGSTEAALNGLNLEG-TLYLLLGGDGK 334
>gi|433545444|ref|ZP_20501798.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Brevibacillus agri
BAB-2500]
gi|432183267|gb|ELK40814.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Brevibacillus agri
BAB-2500]
Length = 454
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/271 (31%), Positives = 134/271 (49%), Gaps = 36/271 (13%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V++E++ A+Q+ I+ +TG+NGK+T T VGQ+L G++ VGGN+G L
Sbjct: 96 VVTEVELASQI--AKAPIIGITGSNGKTTTTTLVGQILKEAGLDVLVGGNIGTVL----- 148
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
C + P Q V E+SS+Q+ + + F P + V+LNL P HL+ H TM+ Y K
Sbjct: 149 -CGLAEEAGPD-QWLVAELSSFQL-MGTREFRPHIGVLLNLYPAHLDYHHTMEAYLDAKL 205
Query: 148 HLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVV 207
+F++ + +LPF + LA G P ++ +KT +VP V
Sbjct: 206 KMFANQTADDIAILPFDQPEI----------LAKCGELPA-RVYYFSKTQ--QVPRGAFV 252
Query: 208 SQLQLHNMKVMGRHNYHNAAVAALSVLGLD---IGVDVEAL-----NSTIEILRTPP--- 256
+ G+ + AVA ++V LD + V L ++ +++L T P
Sbjct: 253 QDGVIRFTDGQGQSD-DIIAVADMTVPHLDNALAAILVAKLAGANTSAIVQVLSTFPGVE 311
Query: 257 HRMQIVHRDIQGVTWVDDSKATNLEATCTGL 287
HRM+ V I GV + +DSKATN EA L
Sbjct: 312 HRMEYVD-SIAGVKYYNDSKATNPEAASRAL 341
>gi|90407782|ref|ZP_01215960.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Psychromonas
sp. CNPT3]
gi|90311142|gb|EAS39249.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Psychromonas
sp. CNPT3]
Length = 445
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 143/289 (49%), Gaps = 27/289 (9%)
Query: 23 QSGKRVMSELDFAAQVIPRS----IKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNL 78
+G ++ +++ A+V+ K++ +TG+NGK+TV + +G+M + + +GGN+
Sbjct: 84 DAGCELIGDIELFARVLKTPSYAHAKVVTITGSNGKTTVTSLLGEMASASPLNVAIGGNI 143
Query: 79 GNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKT 138
G P AL P + ++E+SS+Q+E ++ +LN++ DHL+R+++
Sbjct: 144 GTP---------ALDLLDPNINLYILELSSFQLETTTS-LNADIATILNISADHLDRYRS 193
Query: 139 MKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTAS 198
+Y +K ++ + + L+ A+ F A F VK + E
Sbjct: 194 YDHYIQSKHIIYQQCKKALFNIEDAQTKPLSCALDQICFG-AENADFQLVKQNNET---- 248
Query: 199 FEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHR 258
++G + L + +K+ GRHN+ NA A G +G+D + + +E + HR
Sbjct: 249 --FISMGSETLLNVKKLKLSGRHNWMNALAALAL--GDAVGLDKNIMLAVLENYQGLEHR 304
Query: 259 MQIVHRDIQGVTWVDDSKATNLEATCTGLMDLK---GHKCVILLGGQAK 304
+ V + + GV W++DSK TN+ AT LM L K ++LGGQ K
Sbjct: 305 CEFVAQ-VHGVRWINDSKGTNVGATQAALMGLSQSISGKVHVILGGQGK 352
>gi|322387387|ref|ZP_08060997.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Streptococcus
infantis ATCC 700779]
gi|419842690|ref|ZP_14366027.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
infantis ATCC 700779]
gi|321141916|gb|EFX37411.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Streptococcus
infantis ATCC 700779]
gi|385703635|gb|EIG40748.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
infantis ATCC 700779]
Length = 450
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 145/300 (48%), Gaps = 29/300 (9%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L G V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LAKGIPVLTEVELAYLI--SEAPIVGITGSNGKTTTTTMIGEVLTAAGQNGLLSGNIGYP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A + V+E+SS+Q+ + + F P ++V+ NL P H++ H + ++
Sbjct: 151 ASQVA-------QTATDKDTLVMELSSFQL-MGIQEFHPEIAVITNLMPTHIDYHGSFED 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDT---EAKTAS 198
Y K ++ S+M +L F NQ L + + + N A + K+D E
Sbjct: 203 YVAAKWNIQSNMTAADYLVLNF-NQELAKEL-ATKTNAAVVPFSTLEKVDGAYLEDGLLY 260
Query: 199 FEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHR 258
F V + + V G HN N A+A ++V L GVD E + T+ HR
Sbjct: 261 FRGEKV-----MAADEIGVPGSHNVEN-ALATIAVAKLR-GVDNETIKETLSAFGGVKHR 313
Query: 259 MQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
+Q V + I GV + +DSK+TN+ AT L K +++ GG + N F++L+
Sbjct: 314 LQFVDQ-INGVKFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------GNEFDELV 366
>gi|392383194|ref|YP_005032391.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Azospirillum
brasilense Sp245]
gi|356878159|emb|CCC99027.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Azospirillum
brasilense Sp245]
Length = 467
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 136/312 (43%), Gaps = 41/312 (13%)
Query: 41 RSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQ 100
R + +TGTNGKST T +G ++ G VGGNLG P + PS
Sbjct: 108 RDSAYIGITGTNGKSTTTTLIGHVMEAAGRRIAVGGNLGTP-------ALTFPSVGAGGS 160
Query: 101 VAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGL 160
V+E+SSYQ+E+ V+V+LN+TPDHL RH M Y K +F + +
Sbjct: 161 Y-VLEMSSYQLEL-TYSITFDVAVLLNITPDHLARHGGMDGYVAAKKLIFHRQTKPRTAV 218
Query: 161 LPFGN---QHLNEAIKGHRFNLAW----IGAFPGVKIDTEAKTASFEVPAVGVVSQLQLH 213
+ + + + E +K + W +G+ G + A V++L
Sbjct: 219 IGVDDPTCRAIWEDLKAKGDQVIWPVSALGSVAGGVYAADGWLVDDTFGAAERVAELAAF 278
Query: 214 NMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVD 273
++G HN+ NAA A + GV A+ + + HR Q+V R I GV +V+
Sbjct: 279 P-ALLGTHNWQNAAAAYAAC--KAAGVPAPAIVAAMTTFPGLAHRQQLV-RTIDGVRFVN 334
Query: 274 DSKATNLEATCTGLMDLKGHKCVILLGGQAK-----------------VLNGQESNGFEK 316
DSKATN +AT L +LGGQAK L G+ S+ F
Sbjct: 335 DSKATNADATEKALATFD--PIYWILGGQAKETGLDGLEAYAPRVRHAFLIGEASDRFAA 392
Query: 317 LIEP--LNHHRC 326
+E + H RC
Sbjct: 393 WLEANKVPHTRC 404
>gi|385260126|ref|ZP_10038275.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
sp. SK140]
gi|385192046|gb|EIF39456.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
sp. SK140]
Length = 450
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 145/300 (48%), Gaps = 29/300 (9%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L+ G V++E++ A V I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LEKGIPVLTEVELAYLV--SEAPIVGITGSNGKTTTTTMIGEVLTAAGQNGLLSGNIGYP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A + V+E+SS+Q+ + + F P ++V+ NL P H++ H + +
Sbjct: 151 ASQVA-------QTATDKDTLVMELSSFQL-MGIQEFHPEIAVITNLMPTHIDYHGSFEA 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDT---EAKTAS 198
Y K ++ S+M +L F NQ L + + + N + K+D E
Sbjct: 203 YVEAKWNIQSNMTAADYLVLNF-NQELAKEL-ATKTNATVVPFSTLEKVDGAYLEDGLLY 260
Query: 199 FEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHR 258
F V + + V G HN N A+A ++V L GVD E + T+ HR
Sbjct: 261 FRGEKV-----MAADEIGVPGSHNVEN-ALATIAVAKLR-GVDNETIKETLSAFGGVKHR 313
Query: 259 MQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
+Q V + I+GV + +DSK+TN+ AT L K +++ GG + N FE+L+
Sbjct: 314 LQFVDQ-IKGVKFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------GNEFEELV 366
>gi|373115289|ref|ZP_09529465.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Lachnospiraceae
bacterium 7_1_58FAA]
gi|371670581|gb|EHO35660.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Lachnospiraceae
bacterium 7_1_58FAA]
Length = 462
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 142/292 (48%), Gaps = 42/292 (14%)
Query: 23 QSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPL 82
+ G + SE++ QV P K +AVTG++GK+T T + ++L G +VGGN+G PL
Sbjct: 98 ERGSTITSEMEVFFQVCP--CKTIAVTGSDGKTTTTTIIAELLKAAGQSVYVGGNIGKPL 155
Query: 83 SEAAFHCIALPSSK---PKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTM 139
LP P+ VAV+E+SS+Q+ + P ++VV NL P+HL+ HK+M
Sbjct: 156 ---------LPDVDGMVPE-DVAVLELSSFQLMTMEQ--SPDIAVVTNLAPNHLDVHKSM 203
Query: 140 KNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASF 199
+ Y K ++F+H L +L NQ NE +G F ++ G E + F
Sbjct: 204 EEYIAAKENIFTHQGADGLLVL---NQD-NEITRG--FAVSARGRVTRFSRREELEQGVF 257
Query: 200 EVPAVGVVSQ-------LQLHNMKVMGRHNYHN--AAVAALSVLGLDIGV-DVEALNSTI 249
V L L N+ + G HN N AA+ AL L D V D A + +
Sbjct: 258 VRDGAIWVRNAMHERPVLYLENILLPGEHNIENYMAAIGALDGLVPDQVVRDFAAKFAGV 317
Query: 250 EILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGG 301
E HR+++V R GV + +DS A++ T GL H+ V+L+ G
Sbjct: 318 E------HRIELV-RTRNGVRYYNDSIASSPSRTIAGLRSF--HQKVVLIAG 360
>gi|322380110|ref|ZP_08054363.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthase [Helicobacter
suis HS5]
gi|321147457|gb|EFX42104.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthase [Helicobacter
suis HS5]
Length = 423
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/294 (31%), Positives = 138/294 (46%), Gaps = 34/294 (11%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIK------ILAVTGTNGKSTVVTFVGQMLNHLGIEAFV 74
L+ + K + SE D+ + + K I+ ++GTNGK+T +G +L A V
Sbjct: 70 LVVASKHLCSEYDYIKGLWQTNRKHLPFPTIIFISGTNGKTTTARMLGLLLK--SSNAQV 127
Query: 75 GGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLE 134
GGN+G PL + + I KP + V ++E SS+ + N + P + ++L L+ DHL
Sbjct: 128 GGNIGIPLIDL-YTQIKAEQRKPPY-VWILETSSFTLHYTN-HLVPQIYILLPLSQDHLS 184
Query: 135 RHKTMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEA 194
H+ +NY V KL L F Q +GH F A + P VK
Sbjct: 185 WHENHENY-----------VEAKLKPLSFMQQ------EGHVFLHASLKDHPTVKALINP 227
Query: 195 KTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGV-DVEALNSTIEILR 253
F + + Q+ L K+ + A+ ALSV L GV D + LN+ +
Sbjct: 228 PNLLFYQDSKHLAQQMGLQISKIRFEEPFLLDALLALSVAKLYSGVADYDLLNTYM---- 283
Query: 254 TPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLN 307
PHR++I Q TWVDDSKATN++AT L KG ++LGG K ++
Sbjct: 284 IQPHRIEIFLDQDQN-TWVDDSKATNIDATLKALDRFKGCYIHLILGGDTKGMD 336
>gi|262190386|ref|ZP_06048646.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae CT
5369-93]
gi|262033726|gb|EEY52206.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae CT
5369-93]
Length = 440
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 97/324 (29%), Positives = 152/324 (46%), Gaps = 53/324 (16%)
Query: 2 WML-WLFLLEFQLKATGLAC-------LLQSGKRVMSELD-FAAQVIPRSIKILAVTGTN 52
W L WL + + G+A +L +G V+ +++ FA V ++A+TG+N
Sbjct: 61 WNLEWLLNADLVVTNPGIALATPEIQQVLAAGIPVVGDIELFAWHV---DTPVIAITGSN 117
Query: 53 GKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQME 112
GKSTV G + N G++A VGGN+G P AL P ++ V+E+SS+Q+E
Sbjct: 118 GKSTVTDLSGVLANAAGVKAAVGGNIGVP---------ALDLISPDVELYVLELSSFQLE 168
Query: 113 IPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSH----MVNT-KLGLLPFGNQH 167
+ + LNL+ DH++R++ M++Y K +F H +VN P H
Sbjct: 169 TTSSLKL-KAAAFLNLSEDHMDRYQGMEDYRQAKLRIFDHAETAVVNADDTQTFPDHAAH 227
Query: 168 LNEAIKG----HRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNY 223
L G +F+LA + EA A E + ++GRHN
Sbjct: 228 LQVVTFGVEQAAQFSLAQHQGREYLVARNEAFMACAE--------------LSLVGRHNV 273
Query: 224 HN--AAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLE 281
N +A L G++ + ++AL S + HR Q+V D G+ WV+DSKATN+
Sbjct: 274 ANVLTVLALLDSAGVNFRLALDALKSYTGL----THRCQVV-ADNHGIKWVNDSKATNVA 328
Query: 282 ATCTGLMDLKGH-KCVILLGGQAK 304
+T L LK + +L+GG K
Sbjct: 329 STLAALSGLKIEGQLYLLVGGVGK 352
>gi|406586882|ref|ZP_11061802.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
sp. GMD1S]
gi|419814577|ref|ZP_14339353.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
sp. GMD2S]
gi|404471639|gb|EKA16139.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
sp. GMD2S]
gi|404473624|gb|EKA17955.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
sp. GMD1S]
Length = 450
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 145/300 (48%), Gaps = 29/300 (9%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L G V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LAKGIPVLTEVELAYLI--SEAPIIGITGSNGKTTTTTMIGEVLTAAGQRGLLSGNIGYP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A A + V+E+SS+Q+ + + F P ++V+ NL P H++ H + +
Sbjct: 151 ASQVAQTATAKDT-------LVMELSSFQL-MGVQEFHPEIAVITNLMPTHIDYHGSFEE 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDT---EAKTAS 198
Y K ++ + M +L F NQ L + + + + K+D E
Sbjct: 203 YVAAKWNIQNKMTAGDFLVLNF-NQDLAKEL-ATKTQATVVPFSTQEKVDGAYLEDGQLC 260
Query: 199 FEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHR 258
F V S++ V G HN N A+AA++V L GVD + + T+ HR
Sbjct: 261 FRGEVVMAASEI-----GVPGSHNVEN-ALAAIAVAKLR-GVDNQTIKETLSAFGGVKHR 313
Query: 259 MQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
+Q V +IQGV + +DSK+TN+ AT L K +++ GG + N F++L+
Sbjct: 314 LQFVD-EIQGVKFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------GNEFDELV 366
>gi|383458061|ref|YP_005372050.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Corallococcus
coralloides DSM 2259]
gi|380733530|gb|AFE09532.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Corallococcus
coralloides DSM 2259]
Length = 456
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 137/290 (47%), Gaps = 25/290 (8%)
Query: 24 SGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLS 83
SG V E++ A +++ + L +TGTNGKST G++ + FVGGNLG PL+
Sbjct: 93 SGVPVWGEIELAGRLL-TGTRFLGITGTNGKSTTTALTGELYAKADLRTFVGGNLGRPLA 151
Query: 84 EAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYA 143
EAA S + VVE+SS+Q+E ++ PT + +LNLTPDHL+R+ Y
Sbjct: 152 EAAM-------SPGDWDALVVELSSFQLEGIHQ-LKPTGAAILNLTPDHLDRYANHAEYG 203
Query: 144 LTKCHLFSH--------MVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAK 195
K +F + +VN + + G + P + A+
Sbjct: 204 AAKARIFMNQDAGSDFAVVNADDAAVMGLAASARAPVYGFSLTGRPVVDAPKLAGLAIAR 263
Query: 196 TASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSV-LGLDIGVDVEALNSTIEILRT 254
FE+ G L N + G HN NA AAL LG GV +A+ + ++
Sbjct: 264 PGGFELEFAG--ESYTLTNRSLRGAHNAQNAMAAALLARLG---GVAKDAVQAGLDSYPG 318
Query: 255 PPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
HR++ V R + GV WV+DSKATN+++ L G +I GG+ K
Sbjct: 319 LAHRLESV-RVLDGVEWVNDSKATNVDSVLVALKAFAGDVWLI-AGGKGK 366
>gi|449898449|ref|ZP_21790621.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans R221]
gi|449976942|ref|ZP_21816404.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans 11VS1]
gi|449175036|gb|EMB77482.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans 11VS1]
gi|449259783|gb|EMC57302.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans R221]
Length = 451
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 153/300 (51%), Gaps = 29/300 (9%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L+ V++E++ A + I+ +TG+NGK+T T + +LNH G A + GN+G P
Sbjct: 93 LEKNIPVITEVELAYLI--SEAPIIGITGSNGKTTTTTMIADVLNHAGQSARLSGNIGFP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
SE +A P ++ + V+E+SS+Q+ + + F P ++V+ NL P H++ H + +N
Sbjct: 151 ASE-----VAQPVTEK--DILVMELSSFQL-MGTESFHPHMAVITNLMPTHIDYHGSFEN 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKID---TEAKTAS 198
Y K ++ +M +L F NQ+L + + ++ I K+D + +
Sbjct: 203 YIEAKWNIQKNMTEKDFLVLNF-NQNLAKDL-ANQTQAKIIPFSTKEKVDGAYLDGQMLC 260
Query: 199 FEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHR 258
F+ A+ S+L V G HN N A+A ++V L GV EA+ T+ HR
Sbjct: 261 FKGQAIMSASEL-----GVPGSHNVEN-ALATIAVAKLS-GVSNEAIRETLIHFGGVKHR 313
Query: 259 MQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
+Q + +I GV + +DSK+TN+ AT L K +++ GG + N F++L+
Sbjct: 314 LQSLG-NIAGVKFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------GNEFDELV 366
>gi|450119998|ref|ZP_21865426.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans ST6]
gi|449230787|gb|EMC30035.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans ST6]
Length = 451
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 151/294 (51%), Gaps = 29/294 (9%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V++E++ A + I+ +TG+NGK+T T + +LNH G A + GN+G P SE
Sbjct: 99 VITEVELAYLI--SEAPIIGITGSNGKTTTTTMIADVLNHAGQSARLSGNIGFPASE--- 153
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
+A P ++ + V+E+SS+Q+ + + F P ++V+ NL P H++ H + +NY K
Sbjct: 154 --VAQPVTEK--DILVMELSSFQL-MGTESFHPHMAVITNLMPTHIDYHGSFENYIEAKW 208
Query: 148 HLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDT---EAKTASFEVPAV 204
++ +M +L F NQ+L + + ++ I K+D + + F+ A+
Sbjct: 209 NIQKNMTEKDFLVLNF-NQNLAKDL-ANQTQAKIIPFSTKEKVDGAYLDGQMLCFKGQAI 266
Query: 205 GVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHR 264
S+L V G HN N A+A ++V L GV EA+ T+ HR+Q +
Sbjct: 267 MSASEL-----GVPGSHNVEN-ALATIAVAKLS-GVSNEAIRETLIHFGGVKHRLQSLG- 318
Query: 265 DIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
+I GV + +DSK+TN+ AT L K +++ GG + N F++L+
Sbjct: 319 NIAGVKFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------GNEFDELV 366
>gi|421355087|ref|ZP_15805419.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HE-45]
gi|395954212|gb|EJH64825.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HE-45]
Length = 440
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 97/324 (29%), Positives = 152/324 (46%), Gaps = 53/324 (16%)
Query: 2 WML-WLFLLEFQLKATGLAC-------LLQSGKRVMSELD-FAAQVIPRSIKILAVTGTN 52
W L WL + + G+A +L +G V+ +++ FA V ++A+TG+N
Sbjct: 61 WNLEWLLNADLVVTNPGIALATPEIQQVLAAGIPVVGDIELFAWHV---DTPVIAITGSN 117
Query: 53 GKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQME 112
GKSTV G + N G++A VGGN+G P AL P ++ V+E+SS+Q+E
Sbjct: 118 GKSTVTDLSGVLANAAGVKAAVGGNIGVP---------ALDLISPDVELYVLELSSFQLE 168
Query: 113 IPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSH----MVNT-KLGLLPFGNQH 167
+ + LNL+ DH++R++ M++Y K +F H +VN P H
Sbjct: 169 TTSSLKL-KAAAFLNLSEDHMDRYQGMEDYRQAKLRIFDHAETAVVNADDTQTFPDHAAH 227
Query: 168 LNEAIKG----HRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNY 223
L G +F+LA + EA A E + ++GRHN
Sbjct: 228 LQVVTFGVEQAAQFSLAQHQGREYLFARDEAVMACAE--------------LSLVGRHNV 273
Query: 224 HN--AAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLE 281
N +A L G++ + ++AL S + HR Q+V D G+ WV+DSKATN+
Sbjct: 274 ANVLTVLALLDSAGVNFRLALDALKSYTGL----THRCQVV-ADNHGIKWVNDSKATNVA 328
Query: 282 ATCTGLMDLKGH-KCVILLGGQAK 304
+T L LK + +L+GG K
Sbjct: 329 STLAALSGLKIEGQLYLLVGGVGK 352
>gi|256752933|ref|ZP_05493764.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Thermoanaerobacter
ethanolicus CCSD1]
gi|256748188|gb|EEU61261.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Thermoanaerobacter
ethanolicus CCSD1]
Length = 450
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 154/305 (50%), Gaps = 37/305 (12%)
Query: 27 RVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAA 86
++ E++FA + I A+TGTNGK+T + +G+M + G + +V GN+G PL A
Sbjct: 94 ELLGEVEFAYRF--SKAPIYAITGTNGKTTTTSLLGEMFKNTGRKVYVAGNIGYPLIYAV 151
Query: 87 FHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTK 146
+ +++ F VA E+SS+Q+E K F P +S ++N+TPDHL+RHKT +NY K
Sbjct: 152 -----MEAAEGDFIVA--EISSFQLETI-KEFKPKISCIINITPDHLDRHKTFENYRDIK 203
Query: 147 CHLFSHMVNTKLGLLPFG--------NQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTAS 198
+F + + +L + N+ R +L GA+ K S
Sbjct: 204 GRIFENQREDEYTVLNYDDPVTWSLKNKAKCRVFPFSRKSLLENGAY--------IKDGS 255
Query: 199 FEVPAVGVVSQ-LQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPH 257
+ G + + + + + G HN N A+AA SV L G+ + + +T++ + H
Sbjct: 256 IYISVNGNAEKIIDIEEIYIPGEHNLEN-ALAASSVAYLS-GISADVIANTLKTFKGVEH 313
Query: 258 RMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKL 317
R++ V +I GV + +DSK TN +A+ + LK V++ GG K G E F++
Sbjct: 314 RIEFVD-EINGVKFYNDSKGTNPDASIKAIQALK-TPIVLIAGGYDK---GSE---FDEF 365
Query: 318 IEPLN 322
++ N
Sbjct: 366 VKAFN 370
>gi|254430906|ref|ZP_05044609.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Cyanobium sp. PCC
7001]
gi|197625359|gb|EDY37918.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Cyanobium sp. PCC
7001]
Length = 473
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/309 (30%), Positives = 138/309 (44%), Gaps = 25/309 (8%)
Query: 18 LACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGN 77
L L G RV E+ A R + + +TGTNGK+TV V +L G++A + GN
Sbjct: 95 LTALRSRGVRVQGEM-VPAWEASRPVPWIGITGTNGKTTVTHLVHHLLEASGLDAPMAGN 153
Query: 78 LGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK 137
+G +E + P + VVE+SSYQ+E + P V + LTPDHLERH
Sbjct: 154 VGYSAAELVLDRRGSGAELPTWM--VVELSSYQIEAAPE-VAPRVGIWTTLTPDHLERHG 210
Query: 138 TMKNY-ALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKT 196
T++ Y A+ + L V G P +H W+ A P ++ EA
Sbjct: 211 TLEAYRAIKRSLLERSQVQVLNGDDPDLQRH-----AASWPGACWVTAGPRQEL-PEAIR 264
Query: 197 ASFEVPAVGVVSQLQLHNMKVM--------GRHNYHNAAVAALSVLGLDIGVDVEALNST 248
V A V+ + +M G HN N +A + GL+ G+ + +
Sbjct: 265 PHLWVEAGRVIRDHNGTSQDLMAADCLAMPGEHNRQNMMLAIAA--GLEAGLTGQQMECA 322
Query: 249 IEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNG 308
PHR++ + + GV++ +DSKATN +A + L G V+L GGQAK G
Sbjct: 323 FRSFPGVPHRLERIDQQA-GVSYYNDSKATNYDAAEVAVRALAG-PLVVLAGGQAK--RG 378
Query: 309 QESNGFEKL 317
+ E L
Sbjct: 379 EARGWLEAL 387
>gi|450107170|ref|ZP_21860910.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans SF14]
gi|449222338|gb|EMC22067.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans SF14]
Length = 451
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 150/294 (51%), Gaps = 29/294 (9%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V++E++ A + I+ +TG+NGK+T T + +LNH G A + GN+G P SE
Sbjct: 99 VITEVELAYLI--SEAPIIGITGSNGKTTTTTMIADVLNHAGQSARLSGNIGFPASE--- 153
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
+A P ++ + V+E+SS+Q+ + + F P ++VV NL P H++ H + +NY K
Sbjct: 154 --VAQPVTEK--DILVMELSSFQL-MGTESFHPHMAVVTNLMPTHIDYHGSFENYIEAKW 208
Query: 148 HLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDT---EAKTASFEVPAV 204
++ +M +L F NQ L + + ++ I K+D + + F+ A+
Sbjct: 209 NIQKNMTKEDFLVLNF-NQDLAKDL-ANQTQAKIIPFSTKEKVDGAYLDGQMLCFKGQAI 266
Query: 205 GVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHR 264
S+L V G HN N A+A ++V L GV EA+ T+ HR+Q +
Sbjct: 267 MSASEL-----GVPGSHNVEN-ALATIAVAKLS-GVSNEAIRETLIHFGGVKHRLQSLG- 318
Query: 265 DIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
+I GV + +DSK+TN+ AT L K +++ GG + N F++L+
Sbjct: 319 NIAGVKFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------GNEFDELV 366
>gi|121587626|ref|ZP_01677390.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
2740-80]
gi|153818416|ref|ZP_01971083.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
NCTC 8457]
gi|153830351|ref|ZP_01983018.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
623-39]
gi|255746924|ref|ZP_05420869.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholera
CIRS 101]
gi|262161533|ref|ZP_06030643.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
INDRE 91/1]
gi|360036277|ref|YP_004938040.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Vibrio
cholerae O1 str. 2010EL-1786]
gi|379742192|ref|YP_005334161.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Vibrio
cholerae IEC224]
gi|417814419|ref|ZP_12461072.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-49A2]
gi|418335404|ref|ZP_12944313.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-06A1]
gi|418339367|ref|ZP_12948257.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-23A1]
gi|418346939|ref|ZP_12951692.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-28A1]
gi|418350696|ref|ZP_12955427.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-43A1]
gi|418355998|ref|ZP_12958717.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-61A1]
gi|421318515|ref|ZP_15769083.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
CP1032(5)]
gi|421325950|ref|ZP_15776474.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
CP1041(14)]
gi|421333564|ref|ZP_15784041.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
CP1046(19)]
gi|422897494|ref|ZP_16934933.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-40A1]
gi|422903692|ref|ZP_16938657.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-48A1]
gi|422907577|ref|ZP_16942370.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-70A1]
gi|422914417|ref|ZP_16948921.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HFU-02]
gi|422926621|ref|ZP_16959633.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-38A1]
gi|423145944|ref|ZP_17133537.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-19A1]
gi|423150620|ref|ZP_17137933.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-21A1]
gi|423154454|ref|ZP_17141618.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-22A1]
gi|423157522|ref|ZP_17144614.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-32A1]
gi|423731954|ref|ZP_17705255.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-17A1]
gi|423770797|ref|ZP_17713520.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-50A2]
gi|423896731|ref|ZP_17727563.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-62A1]
gi|423931934|ref|ZP_17731956.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-77A1]
gi|424003370|ref|ZP_17746444.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-17A2]
gi|424007163|ref|ZP_17750132.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-37A1]
gi|424025143|ref|ZP_17764792.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-62B1]
gi|424028029|ref|ZP_17767630.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-69A1]
gi|424587308|ref|ZP_18026886.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
CP1030(3)]
gi|424595964|ref|ZP_18035282.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
CP1040(13)]
gi|424599873|ref|ZP_18039051.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio Cholerae
CP1044(17)]
gi|424607568|ref|ZP_18046508.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
CP1050(23)]
gi|424611386|ref|ZP_18050224.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-39A1]
gi|424614210|ref|ZP_18052994.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-41A1]
gi|424618179|ref|ZP_18056849.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-42A1]
gi|424645922|ref|ZP_18083656.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-56A2]
gi|424653693|ref|ZP_18091072.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-57A2]
gi|440710629|ref|ZP_20891277.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
4260B]
gi|443504743|ref|ZP_21071695.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-64A1]
gi|443508649|ref|ZP_21075404.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-65A1]
gi|443512487|ref|ZP_21079120.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-67A1]
gi|443516046|ref|ZP_21082551.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-68A1]
gi|443519837|ref|ZP_21086225.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-71A1]
gi|443524733|ref|ZP_21090936.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-72A2]
gi|443532317|ref|ZP_21098331.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-7A1]
gi|443536130|ref|ZP_21101997.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-80A1]
gi|443539659|ref|ZP_21105512.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-81A1]
gi|449055156|ref|ZP_21733824.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae O1
str. Inaba G4222]
gi|30316132|sp|Q9KPG5.2|MURD_VIBCH RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|121548136|gb|EAX58209.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
2740-80]
gi|126511049|gb|EAZ73643.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
NCTC 8457]
gi|148874158|gb|EDL72293.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
623-39]
gi|255735326|gb|EET90726.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholera
CIRS 101]
gi|262028844|gb|EEY47498.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
INDRE 91/1]
gi|340036905|gb|EGQ97881.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-49A2]
gi|341619867|gb|EGS45654.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-70A1]
gi|341619975|gb|EGS45761.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-48A1]
gi|341620672|gb|EGS46438.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-40A1]
gi|341636229|gb|EGS60931.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HFU-02]
gi|341645622|gb|EGS69751.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-38A1]
gi|356416439|gb|EHH70070.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-06A1]
gi|356417297|gb|EHH70915.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-21A1]
gi|356422188|gb|EHH75671.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-19A1]
gi|356427659|gb|EHH80900.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-22A1]
gi|356428327|gb|EHH81554.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-23A1]
gi|356429467|gb|EHH82683.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-28A1]
gi|356438992|gb|EHH91992.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-32A1]
gi|356445192|gb|EHH98001.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-43A1]
gi|356452496|gb|EHI05175.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-61A1]
gi|356647431|gb|AET27486.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Vibrio
cholerae O1 str. 2010EL-1786]
gi|378795702|gb|AFC59173.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Vibrio
cholerae IEC224]
gi|395916773|gb|EJH27603.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
CP1032(5)]
gi|395917788|gb|EJH28616.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
CP1041(14)]
gi|395928966|gb|EJH39719.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
CP1046(19)]
gi|395957799|gb|EJH68319.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-56A2]
gi|395958258|gb|EJH68756.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-57A2]
gi|395960906|gb|EJH71257.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-42A1]
gi|395972113|gb|EJH81725.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
CP1030(3)]
gi|408006240|gb|EKG44409.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-39A1]
gi|408011032|gb|EKG48869.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-41A1]
gi|408030692|gb|EKG67344.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
CP1040(13)]
gi|408040709|gb|EKG76874.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio Cholerae
CP1044(17)]
gi|408041986|gb|EKG78062.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
CP1050(23)]
gi|408622399|gb|EKK95383.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-17A1]
gi|408632924|gb|EKL05345.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-50A2]
gi|408653526|gb|EKL24688.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-77A1]
gi|408654019|gb|EKL25162.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-62A1]
gi|408844262|gb|EKL84394.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-37A1]
gi|408845019|gb|EKL85140.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-17A2]
gi|408869532|gb|EKM08828.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-62B1]
gi|408878305|gb|EKM17315.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-69A1]
gi|439973958|gb|ELP50162.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
4260B]
gi|443430822|gb|ELS73380.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-64A1]
gi|443434652|gb|ELS80804.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-65A1]
gi|443438545|gb|ELS88265.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-67A1]
gi|443442582|gb|ELS95890.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-68A1]
gi|443446471|gb|ELT03135.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-71A1]
gi|443449186|gb|ELT09487.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-72A2]
gi|443457707|gb|ELT25104.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-7A1]
gi|443460633|gb|ELT31717.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-80A1]
gi|443464789|gb|ELT39450.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-81A1]
gi|448265198|gb|EMB02433.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae O1
str. Inaba G4222]
Length = 440
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 97/324 (29%), Positives = 152/324 (46%), Gaps = 53/324 (16%)
Query: 2 WML-WLFLLEFQLKATGLAC-------LLQSGKRVMSELD-FAAQVIPRSIKILAVTGTN 52
W L WL + + G+A +L +G V+ +++ FA V ++A+TG+N
Sbjct: 61 WNLEWLLNADLVVTNPGIALATPEIQQVLAAGIPVVGDIELFAWHV---DTPVIAITGSN 117
Query: 53 GKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQME 112
GKSTV G + N G++A VGGN+G P AL P ++ V+E+SS+Q+E
Sbjct: 118 GKSTVTDLSGVLANAAGVKAAVGGNIGVP---------ALDLISPDVELYVLELSSFQLE 168
Query: 113 IPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSH----MVNT-KLGLLPFGNQH 167
+ + LNL+ DH++R++ M++Y K +F H +VN P H
Sbjct: 169 TTSSLKL-KAAAFLNLSEDHMDRYQGMEDYRQAKLRIFDHAETAVVNADDTQTFPDHAAH 227
Query: 168 LNEAIKG----HRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNY 223
L G +F+LA + EA A E + ++GRHN
Sbjct: 228 LQVVTFGVEQAAQFSLAQHQGREYLFARDEAVMACAE--------------LSLVGRHNV 273
Query: 224 HN--AAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLE 281
N +A L G++ + ++AL S + HR Q+V D G+ WV+DSKATN+
Sbjct: 274 ANVLTVLALLDSAGVNFRLALDALKSYTGL----THRCQVV-ADNHGIKWVNDSKATNVA 328
Query: 282 ATCTGLMDLKGH-KCVILLGGQAK 304
+T L LK + +L+GG K
Sbjct: 329 STLAALSGLKIEGQLYLLVGGVGK 352
>gi|365538540|ref|ZP_09363715.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Vibrio
ordalii ATCC 33509]
Length = 439
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 140/291 (48%), Gaps = 39/291 (13%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
++A+TG+NGKSTV G + G++ VGGN+G P AL + + + V+
Sbjct: 110 VIAITGSNGKSTVTDLTGVLAKAAGVKVAVGGNIGVP---------ALDLLQQEADLYVL 160
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSH----MVNTKLGL 160
E+SS+Q+E + + + LNLT DH++R+ M++Y K +F + +VN
Sbjct: 161 ELSSFQLETTSSLKLVS-AAFLNLTEDHMDRYDGMESYRQAKLRIFKYAQAAVVNAD--- 216
Query: 161 LPFGNQHLNEAIKGH--RFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVM 218
+Q + GH RF++ + ID ++ + P L ++++
Sbjct: 217 ---DSQTEPPSFSGHIARFSVEHDADYCTQMIDGKSFLVAKGTPL------LASEELRLV 267
Query: 219 GRHNYHN--AAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSK 276
GRHN N +A L + G+D ++AL S R HR Q+V D GV WV+DSK
Sbjct: 268 GRHNSANVLTVLALLDLAGVDYSSALDALKS----YRGLTHRCQVV-ADNHGVKWVNDSK 322
Query: 277 ATNLEATCTGLMDLKGHKCVILL-GGQAKVLNGQESNGFEKLIEPLNHHRC 326
ATN+ +T L L + LL GG K G + + +++ LN C
Sbjct: 323 ATNVASTQAALSGLNCQGTLYLLVGGVGK---GADFSLLAPILKTLNVKLC 370
>gi|345883073|ref|ZP_08834522.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Prevotella sp.
C561]
gi|345044111|gb|EGW48158.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Prevotella sp.
C561]
Length = 443
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 150/291 (51%), Gaps = 27/291 (9%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
L+ G ++SE++FA + + K++ +TG+NGK+T + + + G +A + GN+GN
Sbjct: 82 LMAQGTHIISEIEFAGRYT--NSKMICITGSNGKTTTTSLIYHIFKDAGYDAGLAGNIGN 139
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDHLERHK-T 138
L AL ++ + ++E+SS+Q++ N Y F ++++LN+TPDHL+R+
Sbjct: 140 SL--------ALQVAEDPHEYYIIELSSFQLD--NMYDFRANIAILLNITPDHLDRYDYK 189
Query: 139 MKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTAS 198
+NYA K + + TK + N + +F++ + +P ++ +
Sbjct: 190 FENYADAKMRIIQNQ--TKEDSFIYWNDDPVIKKELEKFDVHAV-CYPFSELKEKGSIGY 246
Query: 199 FEVPAVGVVS----QLQLHNMKVMGRHNYHNAAVAALSVLGLDI-GVDVEALNSTIEILR 253
E + ++ ++ + G+HN +N+ A ++ DI G+ E + ++
Sbjct: 247 IEEGQYTIEQPEPFNMEQEDLSLTGKHNIYNSLAAGIAS---DISGIKKENIRKSLSDFP 303
Query: 254 TPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
HR++ V + + GV +++DSKATN++A C ++ V++LGG+ K
Sbjct: 304 GVEHRLEKVCK-VAGVQYINDSKATNVDA-CWYALESMNTPTVLILGGKDK 352
>gi|260913001|ref|ZP_05919486.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Pasteurella
dagmatis ATCC 43325]
gi|260632991|gb|EEX51157.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Pasteurella
dagmatis ATCC 43325]
Length = 434
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 145/299 (48%), Gaps = 36/299 (12%)
Query: 13 LKATGLACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEA 72
+K + L +G +V+ +++ + S I+A+TG+NGKSTV T V +M G++
Sbjct: 78 IKTPEIQTALSAGVKVIGDIELFCR--EASKPIIAITGSNGKSTVTTLVYEMAKASGLKV 135
Query: 73 FVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDH 132
+GGN+G P AL + + + V+E+SS+Q+E T + VLN+T DH
Sbjct: 136 GMGGNIGIP---------ALSLLEQNYDLYVLELSSFQLETTYS-LKATSATVLNVTEDH 185
Query: 133 LERHKTMKNYALTKCHLF----SHMVNTKLGLLPFGNQHLNEAIK-GHRFNLAWIGAFPG 187
++R+ +++Y K ++ + +VNT+ L + L A+ G + W
Sbjct: 186 MDRYIDLEDYRQAKLRIYHNAKTAIVNTEDPLTTIDS--LKSAVSFGEENSDYW------ 237
Query: 188 VKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNS 247
+ TE F + L +K++GRHNY N V A L V +E + +
Sbjct: 238 --LKTENGKQYFMAKNEMI---LPCDEIKLVGRHNYMN--VLAAIALAQAANVSLEGIRT 290
Query: 248 TIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLK--GHKCVILLGGQAK 304
+ HR Q+ H GV W++DSKATN+ +T L L+ GH +LLGG K
Sbjct: 291 ALREFSGLDHRFQLAHF-ANGVYWINDSKATNVGSTVAALTGLQVAGH-LHLLLGGDGK 347
>gi|229521234|ref|ZP_04410654.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae TM
11079-80]
gi|229341766|gb|EEO06768.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae TM
11079-80]
Length = 467
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 97/324 (29%), Positives = 152/324 (46%), Gaps = 53/324 (16%)
Query: 2 WML-WLFLLEFQLKATGLAC-------LLQSGKRVMSELD-FAAQVIPRSIKILAVTGTN 52
W L WL + + G+A +L +G V+ +++ FA V ++A+TG+N
Sbjct: 88 WNLEWLLNADLVVTNPGIALATPEIQQVLAAGIPVVGDIELFAWHV---DTPVIAITGSN 144
Query: 53 GKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQME 112
GKSTV G + N G++A VGGN+G P AL P ++ V+E+SS+Q+E
Sbjct: 145 GKSTVTDLSGVLANAAGVKAAVGGNIGVP---------ALDLISPDVELYVLELSSFQLE 195
Query: 113 IPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSH----MVNT-KLGLLPFGNQH 167
+ + LNL+ DH++R++ M++Y K +F H +VN P H
Sbjct: 196 TTSSLKL-KAAAFLNLSEDHMDRYQGMEDYRQAKLRIFDHAETAVVNADDTQTFPDHAAH 254
Query: 168 LNEAIKG----HRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNY 223
L G +F+LA + EA A E + ++GRHN
Sbjct: 255 LQVVTFGVEQAAQFSLAQHQGREYLFARDEAVMACAE--------------LSLVGRHNV 300
Query: 224 HN--AAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLE 281
N +A L G++ + ++AL S + HR Q+V D G+ WV+DSKATN+
Sbjct: 301 ANVLTVLALLDSAGVNFRLALDALKSYTGL----THRCQVV-ADNHGIKWVNDSKATNVA 355
Query: 282 ATCTGLMDLKGH-KCVILLGGQAK 304
+T L LK + +L+GG K
Sbjct: 356 STLAALSGLKIEGQLYLLVGGVGK 379
>gi|227082526|ref|YP_002811077.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Vibrio
cholerae M66-2]
gi|229507535|ref|ZP_04397040.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae BX
330286]
gi|229512269|ref|ZP_04401748.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
B33]
gi|229519405|ref|ZP_04408848.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
RC9]
gi|229607041|ref|YP_002877689.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Vibrio
cholerae MJ-1236]
gi|9656976|gb|AAF95546.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae O1
biovar El Tor str. N16961]
gi|227010414|gb|ACP06626.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
M66-2]
gi|229344094|gb|EEO09069.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
RC9]
gi|229352234|gb|EEO17175.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
B33]
gi|229355040|gb|EEO19961.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae BX
330286]
gi|229369696|gb|ACQ60119.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
MJ-1236]
Length = 467
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 97/324 (29%), Positives = 152/324 (46%), Gaps = 53/324 (16%)
Query: 2 WML-WLFLLEFQLKATGLAC-------LLQSGKRVMSELD-FAAQVIPRSIKILAVTGTN 52
W L WL + + G+A +L +G V+ +++ FA V ++A+TG+N
Sbjct: 88 WNLEWLLNADLVVTNPGIALATPEIQQVLAAGIPVVGDIELFAWHV---DTPVIAITGSN 144
Query: 53 GKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQME 112
GKSTV G + N G++A VGGN+G P AL P ++ V+E+SS+Q+E
Sbjct: 145 GKSTVTDLSGVLANAAGVKAAVGGNIGVP---------ALDLISPDVELYVLELSSFQLE 195
Query: 113 IPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSH----MVNT-KLGLLPFGNQH 167
+ + LNL+ DH++R++ M++Y K +F H +VN P H
Sbjct: 196 TTSSLKL-KAAAFLNLSEDHMDRYQGMEDYRQAKLRIFDHAETAVVNADDTQTFPDHAAH 254
Query: 168 LNEAIKG----HRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNY 223
L G +F+LA + EA A E + ++GRHN
Sbjct: 255 LQVVTFGVEQAAQFSLAQHQGREYLFARDEAVMACAE--------------LSLVGRHNV 300
Query: 224 HN--AAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLE 281
N +A L G++ + ++AL S + HR Q+V D G+ WV+DSKATN+
Sbjct: 301 ANVLTVLALLDSAGVNFRLALDALKSYTGL----THRCQVV-ADNHGIKWVNDSKATNVA 355
Query: 282 ATCTGLMDLKGH-KCVILLGGQAK 304
+T L LK + +L+GG K
Sbjct: 356 STLAALSGLKIEGQLYLLVGGVGK 379
>gi|365842362|ref|ZP_09383384.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Flavonifractor
plautii ATCC 29863]
gi|364575892|gb|EHM53253.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Flavonifractor
plautii ATCC 29863]
Length = 479
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 142/292 (48%), Gaps = 42/292 (14%)
Query: 23 QSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPL 82
+ G + SE++ QV P K +AVTG++GK+T T + ++L G +VGGN+G PL
Sbjct: 115 ERGSTITSEMEVFFQVCP--CKTIAVTGSDGKTTTTTIIAELLKAAGQSVYVGGNIGKPL 172
Query: 83 SEAAFHCIALPSSK---PKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTM 139
LP P+ VAV+E+SS+Q+ + P ++VV NL P+HL+ HK+M
Sbjct: 173 ---------LPDVDGMVPE-DVAVLELSSFQLMTMEQ--SPDIAVVTNLAPNHLDVHKSM 220
Query: 140 KNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASF 199
+ Y K ++F+H L +L NQ NE +G F ++ G E + F
Sbjct: 221 EEYIAAKENIFTHQGADGLLVL---NQD-NEITRG--FAVSARGRVTRFSRREELEQGVF 274
Query: 200 EVPAVGVVSQ-------LQLHNMKVMGRHNYHN--AAVAALSVLGLDIGV-DVEALNSTI 249
V L L N+ + G HN N AA+ AL L D V D A + +
Sbjct: 275 VRDGAIWVRNAMHERPVLYLENILLPGEHNIENYMAAIGALDGLVPDQVVRDFAAKFAGV 334
Query: 250 EILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGG 301
E HR+++V R GV + +DS A++ T GL H+ V+L+ G
Sbjct: 335 E------HRIELV-RTRNGVRYYNDSIASSPSRTIAGLRSF--HQKVVLIAG 377
>gi|359687842|ref|ZP_09257843.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Leptospira
licerasiae serovar Varillal str. MMD0835]
gi|418750348|ref|ZP_13306634.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Leptospira
licerasiae str. MMD4847]
gi|418758453|ref|ZP_13314635.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Leptospira
licerasiae serovar Varillal str. VAR 010]
gi|384114355|gb|EIE00618.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Leptospira
licerasiae serovar Varillal str. VAR 010]
gi|404272951|gb|EJZ40271.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Leptospira
licerasiae str. MMD4847]
Length = 449
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/282 (32%), Positives = 137/282 (48%), Gaps = 26/282 (9%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V+SE++ A S K++ VTGT+GKST + +++ GGN+G S+
Sbjct: 90 VVSEVELARAFY--SGKLIGVTGTDGKSTTTSLTAHLVSTDFPGTTAGGNIGLAFSD--- 144
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
C+ KP V+V+E+SSYQ+E VSV+LNL DHLERHK ++NY K
Sbjct: 145 FCL-----KP-VPVSVLELSSYQLEDSGPLEL-NVSVILNLASDHLERHKNLENYFAAKA 197
Query: 148 HLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAW---IGAFPGVKIDTEAKTASFEVPAV 204
+ H N + L+ ++ E I+G L W I F G + T+A + E
Sbjct: 198 RIVDHS-NPRHTLVT-SSKLFKERIQG----LGWSCKILVF-GREEGTDAVISEEERTIK 250
Query: 205 GVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHR 264
N + G HN N A + L+ IG E + + I + PHR Q V +
Sbjct: 251 TGKEIYDAKNFPLPGGHNLDNLAASILAAEA--IGAKPEHIQNLIGTFKGLPHRFQYVGK 308
Query: 265 DIQGVTWVDDSKATNLEATCTGLMDLKGHKCVIL-LGGQAKV 305
G+++++DSK+TNL + GL K K L LGG+ KV
Sbjct: 309 -AAGISFINDSKSTNLHSMLAGLNTWKDKKGTFLILGGRPKV 349
>gi|153803325|ref|ZP_01957911.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
MZO-3]
gi|254226621|ref|ZP_04920201.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
V51]
gi|254291799|ref|ZP_04962584.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
AM-19226]
gi|384425346|ref|YP_005634704.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
LMA3984-4]
gi|419830839|ref|ZP_14354324.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-1A2]
gi|422918235|ref|ZP_16952549.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-02A1]
gi|422923697|ref|ZP_16956842.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
BJG-01]
gi|423823132|ref|ZP_17717140.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-55C2]
gi|423998656|ref|ZP_17741906.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-02C1]
gi|424020476|ref|ZP_17760257.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-59B1]
gi|424625854|ref|ZP_18064313.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-50A1]
gi|424630341|ref|ZP_18068623.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-51A1]
gi|424634388|ref|ZP_18072486.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-52A1]
gi|424641370|ref|ZP_18079250.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-56A1]
gi|424649439|ref|ZP_18087100.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-57A1]
gi|429884935|ref|ZP_19366540.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
PS15]
gi|124121143|gb|EAY39886.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
MZO-3]
gi|125620840|gb|EAZ49194.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
V51]
gi|150422311|gb|EDN14273.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
AM-19226]
gi|327484899|gb|AEA79306.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
LMA3984-4]
gi|341635570|gb|EGS60284.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-02A1]
gi|341643728|gb|EGS68005.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
BJG-01]
gi|408011165|gb|EKG48996.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-50A1]
gi|408017244|gb|EKG54760.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-52A1]
gi|408022073|gb|EKG59300.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-56A1]
gi|408031416|gb|EKG68041.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-57A1]
gi|408053413|gb|EKG88427.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-51A1]
gi|408620612|gb|EKK93624.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-1A2]
gi|408634405|gb|EKL06663.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-55C2]
gi|408852202|gb|EKL92043.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-02C1]
gi|408866674|gb|EKM06051.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-59B1]
gi|429228267|gb|EKY34195.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
PS15]
Length = 440
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 97/324 (29%), Positives = 152/324 (46%), Gaps = 53/324 (16%)
Query: 2 WML-WLFLLEFQLKATGLAC-------LLQSGKRVMSELD-FAAQVIPRSIKILAVTGTN 52
W L WL + + G+A +L +G V+ +++ FA V ++A+TG+N
Sbjct: 61 WNLEWLLNADLVVTNPGIALATPEIQQVLAAGIPVVGDIELFAWHV---DTPVIAITGSN 117
Query: 53 GKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQME 112
GKSTV G + N G++A VGGN+G P AL P ++ V+E+SS+Q+E
Sbjct: 118 GKSTVTDLSGVLANAAGVKAAVGGNIGVP---------ALDLISPDVELYVLELSSFQLE 168
Query: 113 IPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSH----MVNT-KLGLLPFGNQH 167
+ + LNL+ DH++R++ M++Y K +F H +VN P H
Sbjct: 169 TTSSLKL-KAAAFLNLSEDHMDRYQGMEDYRQAKLRIFDHAETAVVNADDTQTFPDHAAH 227
Query: 168 LNEAIKG----HRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNY 223
L G +F+LA + EA A E + ++GRHN
Sbjct: 228 LQVVTFGVEQAAQFSLAQHQGREYLFARDEAVMACAE--------------LSLVGRHNV 273
Query: 224 HN--AAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLE 281
N +A L G++ + ++AL S + HR Q+V D G+ WV+DSKATN+
Sbjct: 274 ANVLTVLALLDSAGVNFRLALDALKSYTGL----THRCQVV-ADNHGIKWVNDSKATNVA 328
Query: 282 ATCTGLMDLKGH-KCVILLGGQAK 304
+T L LK + +L+GG K
Sbjct: 329 STLAALSGLKIEGQLYLLVGGVGK 352
>gi|399052145|ref|ZP_10741710.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Brevibacillus sp.
CF112]
gi|398050011|gb|EJL42401.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Brevibacillus sp.
CF112]
Length = 454
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 134/273 (49%), Gaps = 40/273 (14%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V++E++ A+Q+ I+ +TG+NGK+T T VGQ+L G++ VGGN+G L
Sbjct: 96 VVTEVELASQI--AKAPIIGITGSNGKTTTTTLVGQILKEAGLDVLVGGNIGTVL----- 148
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
C + P Q V E+SS+Q+ + + F P + V+LNL P HL+ H TM+ Y K
Sbjct: 149 -CGLAEEAGPD-QWLVAELSSFQL-MGTREFRPHIGVLLNLYPAHLDYHHTMEAYLDAKL 205
Query: 148 HLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWI--------GAF--PGVKIDTEAKTA 197
+F++ + +LPF + + + GAF GV T+ +
Sbjct: 206 KMFANQTADDIAILPFDQPEILAKCGELPARVYYFSKTQQVPRGAFVQDGVIRFTDGQGQ 265
Query: 198 SFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPP- 256
S ++ AV ++ L N A+AA+ V L G + A+ +++L T P
Sbjct: 266 SEDIIAVADMTVPHLDN------------ALAAILVAKL-AGANTSAI---VQVLSTFPG 309
Query: 257 --HRMQIVHRDIQGVTWVDDSKATNLEATCTGL 287
HRM+ V I GV + +DSKATN EA L
Sbjct: 310 VEHRMEYVD-SIAGVKYYNDSKATNPEAASRAL 341
>gi|161581989|ref|NP_232033.2| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Vibrio
cholerae O1 biovar El Tor str. N16961]
gi|254849525|ref|ZP_05238875.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Vibrio cholerae
MO10]
gi|298500237|ref|ZP_07010042.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Vibrio cholerae MAK
757]
gi|254845230|gb|EET23644.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Vibrio cholerae
MO10]
gi|297540930|gb|EFH76984.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Vibrio cholerae MAK
757]
Length = 444
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 97/324 (29%), Positives = 152/324 (46%), Gaps = 53/324 (16%)
Query: 2 WML-WLFLLEFQLKATGLAC-------LLQSGKRVMSELD-FAAQVIPRSIKILAVTGTN 52
W L WL + + G+A +L +G V+ +++ FA V ++A+TG+N
Sbjct: 65 WNLEWLLNADLVVTNPGIALATPEIQQVLAAGIPVVGDIELFAWHV---DTPVIAITGSN 121
Query: 53 GKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQME 112
GKSTV G + N G++A VGGN+G P AL P ++ V+E+SS+Q+E
Sbjct: 122 GKSTVTDLSGVLANAAGVKAAVGGNIGVP---------ALDLISPDVELYVLELSSFQLE 172
Query: 113 IPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSH----MVNT-KLGLLPFGNQH 167
+ + LNL+ DH++R++ M++Y K +F H +VN P H
Sbjct: 173 TTSSLKL-KAAAFLNLSEDHMDRYQGMEDYRQAKLRIFDHAETAVVNADDTQTFPDHAAH 231
Query: 168 LNEAIKG----HRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNY 223
L G +F+LA + EA A E + ++GRHN
Sbjct: 232 LQVVTFGVEQAAQFSLAQHQGREYLFARDEAVMACAE--------------LSLVGRHNV 277
Query: 224 HN--AAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLE 281
N +A L G++ + ++AL S + HR Q+V D G+ WV+DSKATN+
Sbjct: 278 ANVLTVLALLDSAGVNFRLALDALKSYTGL----THRCQVV-ADNHGIKWVNDSKATNVA 332
Query: 282 ATCTGLMDLKGH-KCVILLGGQAK 304
+T L LK + +L+GG K
Sbjct: 333 STLAALSGLKIEGQLYLLVGGVGK 356
>gi|419778037|ref|ZP_14303939.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
oralis SK10]
gi|383187790|gb|EIC80234.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
oralis SK10]
Length = 450
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 146/297 (49%), Gaps = 23/297 (7%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L G V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LAKGIPVLTEVELAYLI--SEAPIIGITGSNGKTTTTTMIGEVLTAAGQRGLLSGNIGYP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A A + V+E+SS+Q+ + + F P ++V+ NL P H++ H + +
Sbjct: 151 ASQVAQTATAKDT-------LVMELSSFQL-MGVQEFHPEIAVITNLMPTHIDYHGSFEE 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEV 201
Y K ++ + M +L F NQ L + + A + F ++ A A ++
Sbjct: 203 YVAAKWNIQNKMTADDFLVLNF-NQDLAKELATK--TQATVVPFSTLEKVDGAYLADGQL 259
Query: 202 PAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQI 261
G V + + V G HN N A+A ++V L GVD + + T+ HR+Q
Sbjct: 260 YFRGEVV-MAADEIGVPGSHNVEN-ALATIAVAKLR-GVDNQTIKETLSSFGGVKHRLQF 316
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
V +IQGV + +DSK+TN+ AT L K +++ GG + N F++L+
Sbjct: 317 VD-EIQGVKFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------GNEFDELV 366
>gi|167037226|ref|YP_001664804.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
[Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|320115645|ref|YP_004185804.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Thermoanaerobacter
brockii subsp. finnii Ako-1]
gi|226722951|sp|B0K8K5.1|MURD_THEP3 RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|166856060|gb|ABY94468.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|319928736|gb|ADV79421.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Thermoanaerobacter
brockii subsp. finnii Ako-1]
Length = 454
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 154/304 (50%), Gaps = 37/304 (12%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
++ E++FA + I A+TGTNGK+T + +G+M + G + +V GN+G PL A
Sbjct: 95 LLGEVEFAYRF--SKAPIYAITGTNGKTTTTSLLGEMFKNTGRKVYVAGNIGYPLIYAV- 151
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
+ +++ F VA E+SS+Q+E K F P +S ++N+TPDHL+RHKT +NY K
Sbjct: 152 ----MEAAEGDFIVA--EISSFQLETI-KEFKPKISCIINITPDHLDRHKTFENYRDIKG 204
Query: 148 HLFSHMVNTKLGLLPFG--------NQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASF 199
+F + + +L + N+ R +L GA+ K S
Sbjct: 205 RIFENQREDEYTVLNYDDPVTWSLKNKAKCRVFPFSRKSLLENGAY--------IKDGSI 256
Query: 200 EVPAVGVVSQ-LQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHR 258
+ G + + + + + G HN N A+AA SV L G+ + + +T++ + HR
Sbjct: 257 YISVNGNAEKIIDIEEIYIPGEHNLEN-ALAASSVAYLS-GISADVIANTLKTFKGVEHR 314
Query: 259 MQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
++ V +I GV + +DSK TN +A+ + LK V++ GG K G E F++ +
Sbjct: 315 IEFVD-EINGVKFYNDSKGTNPDASIKAIQALK-TPIVLIAGGYDK---GSE---FDEFV 366
Query: 319 EPLN 322
+ N
Sbjct: 367 KAFN 370
>gi|450056566|ref|ZP_21842115.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans NLML4]
gi|449206689|gb|EMC07385.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans NLML4]
Length = 451
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 151/294 (51%), Gaps = 29/294 (9%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V++E++ A + I+ +TG+NGK+T T + +LNH G A + GN+G P SE
Sbjct: 99 VITEVELAYLI--SEAPIIGITGSNGKTTTTTMIADVLNHAGQSARLSGNIGFPASE--- 153
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
+A P ++ + V+E+SS+Q+ + + F P ++V+ NL P H++ H + +NY K
Sbjct: 154 --VAQPVTEK--DILVMELSSFQL-MGTESFHPHMAVITNLMPTHIDYHGSFENYIEAKW 208
Query: 148 HLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDT---EAKTASFEVPAV 204
++ +M +L F NQ+L + + ++ I K+D + + F+ A+
Sbjct: 209 NIQKNMTEKDFLVLNF-NQNLAKDL-ANQTQAKIIPFSTKEKVDGAYLDGQMLCFKGQAI 266
Query: 205 GVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHR 264
S+L V G HN N A+A ++V L GV EA+ T+ HR+Q +
Sbjct: 267 MSASEL-----GVPGSHNVEN-ALATIAVAKLS-GVSNEAIRETLIHFGGVKHRLQSLG- 318
Query: 265 DIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
+I GV + +DSK+TN+ AT L K +++ GG + N F++L+
Sbjct: 319 NIAGVKFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------GNEFDELV 366
>gi|419838094|ref|ZP_14361532.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-46B1]
gi|423736055|ref|ZP_17709246.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-41B1]
gi|424010388|ref|ZP_17753322.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-44C1]
gi|408629138|gb|EKL01848.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-41B1]
gi|408856642|gb|EKL96337.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-46B1]
gi|408863131|gb|EKM02624.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-44C1]
Length = 440
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 97/324 (29%), Positives = 152/324 (46%), Gaps = 53/324 (16%)
Query: 2 WML-WLFLLEFQLKATGLAC-------LLQSGKRVMSELD-FAAQVIPRSIKILAVTGTN 52
W L WL + + G+A +L +G V+ +++ FA V ++A+TG+N
Sbjct: 61 WNLEWLLNADLVVTNPGIALARPEIQQVLAAGIPVVGDIELFAWHV---DTPVIAITGSN 117
Query: 53 GKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQME 112
GKSTV G + N G++A VGGN+G P AL P ++ V+E+SS+Q+E
Sbjct: 118 GKSTVTDLSGVLANAAGVKAAVGGNIGVP---------ALDLISPDVELYVLELSSFQLE 168
Query: 113 IPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSH----MVNT-KLGLLPFGNQH 167
+ + LNL+ DH++R++ M++Y K +F H +VN P H
Sbjct: 169 TTSSLKL-KAAAFLNLSEDHMDRYQGMEDYRQAKLRIFDHAETAVVNADDTQTFPDHAAH 227
Query: 168 LNEAIKG----HRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNY 223
L G +F+LA + EA A E + ++GRHN
Sbjct: 228 LQVVTFGVEQAAQFSLAQHQGREYLFARDEAVMACAE--------------LSLVGRHNV 273
Query: 224 HN--AAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLE 281
N +A L G++ + ++AL S + HR Q+V D G+ WV+DSKATN+
Sbjct: 274 ANVLTVLALLDSAGVNFRLALDALKSYTGL----THRCQVV-ADNHGIKWVNDSKATNVA 328
Query: 282 ATCTGLMDLKGH-KCVILLGGQAK 304
+T L LK + +L+GG K
Sbjct: 329 STLAALSGLKIEGQLYLLVGGVGK 352
>gi|421344606|ref|ZP_15795009.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-43B1]
gi|395940686|gb|EJH51367.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-43B1]
Length = 406
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 131/272 (48%), Gaps = 41/272 (15%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
++A+TG+NGKSTV G + N G++A VGGN+G P AL P ++ V+
Sbjct: 76 VIAITGSNGKSTVTDLSGVLANAAGVKAAVGGNIGVP---------ALDLISPDVELYVL 126
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSH----MVNT-KLG 159
E+SS+Q+E + + LNL+ DH++R++ M++Y K +F H +VN
Sbjct: 127 ELSSFQLETTSSLKL-KAAAFLNLSEDHMDRYQGMEDYRQAKLRIFDHAETAVVNADDTQ 185
Query: 160 LLPFGNQHLNEAIKG----HRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNM 215
P HL G +F+LA + EA A E +
Sbjct: 186 TFPDHAAHLQVVTFGVEQAAQFSLAQHQGREYLFARDEAVMACAE--------------L 231
Query: 216 KVMGRHNYHN--AAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVD 273
++GRHN N +A L G++ + ++AL S + HR Q+V D G+ WV+
Sbjct: 232 SLVGRHNVANVLTVLALLDSAGVNFRLALDALKSYTGL----THRCQVV-ADNHGIKWVN 286
Query: 274 DSKATNLEATCTGLMDLKGH-KCVILLGGQAK 304
DSKATN+ +T L LK + +L+GG K
Sbjct: 287 DSKATNVASTLAALSGLKIEGQLYLLVGGVGK 318
>gi|347754354|ref|YP_004861918.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Candidatus
Chloracidobacterium thermophilum B]
gi|347586872|gb|AEP11402.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Candidatus
Chloracidobacterium thermophilum B]
Length = 475
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 138/291 (47%), Gaps = 20/291 (6%)
Query: 17 GLACL---LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAF 73
GLA L ++G ++ E++ A + + +I+A+TG+NGKST T +G++L G+
Sbjct: 90 GLAALQPAREAGVPIIGEIELAFRHL--RGRIVAITGSNGKSTTTTLIGRLLAEAGLLTQ 147
Query: 74 VGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHL 133
VGGN+G ++L + V+E SS+Q+E F P + V+LN+TPDHL
Sbjct: 148 VGGNIG-------VAAVSLVETSRDDGWTVLECSSFQLET-VVTFRPHIGVLLNITPDHL 199
Query: 134 ERHKTMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTE 193
+RH T +NY K ++F L +L + A A + F + E
Sbjct: 200 DRHGTFENYVAAKLNMFRRFDGETLAVLNADDPTTPRAQAQLAAQGAPVTLFSAQRELEE 259
Query: 194 AKTASFE--VPAVGVVSQLQLH--NMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTI 249
+ V ++ LH ++ + GRHN N + A L GVD E +TI
Sbjct: 260 GLFPRGDELVCRTRQAERVLLHRADLPLPGRHNLEN--ILASLAAALAAGVDPETARTTI 317
Query: 250 EILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLG 300
R HR++ V ++ GV + +DSKATN+ A + VIL G
Sbjct: 318 RDFRGLEHRLEFVA-EVAGVRYFNDSKATNVAAAQVSIEAFPSGLHVILGG 367
>gi|229514032|ref|ZP_04403494.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
TMA 21]
gi|229349213|gb|EEO14170.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
TMA 21]
Length = 467
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 131/272 (48%), Gaps = 41/272 (15%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
++A+TG+NGKSTV G + N G++A VGGN+G P AL P ++ V+
Sbjct: 137 VIAITGSNGKSTVTDLSGVLANAAGVKAAVGGNIGVP---------ALDLISPDVELYVL 187
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSH----MVNT-KLG 159
E+SS+Q+E + + LNL+ DH++R++ M++Y K +F H +VN
Sbjct: 188 ELSSFQLETTSSLKLKA-AAFLNLSEDHMDRYQGMEDYRQAKLRIFDHAETAVVNADDTQ 246
Query: 160 LLPFGNQHLNEAIKG----HRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNM 215
P HL G +F+LA + EA A E +
Sbjct: 247 TFPDHAAHLQVVTFGVEQAAQFSLAQHQGREYLFARDEAVMACAE--------------L 292
Query: 216 KVMGRHNYHN--AAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVD 273
++GRHN N +A L G++ + ++AL S + HR Q+V D G+ WV+
Sbjct: 293 SLVGRHNVANVLTVLALLDSAGVNFRLALDALKSYTGL----THRCQVV-ADNHGIKWVN 347
Query: 274 DSKATNLEATCTGLMDLKGH-KCVILLGGQAK 304
DSKATN+ +T L LK + +L+GG K
Sbjct: 348 DSKATNVASTLAALSGLKIEGQLYLLVGGVGK 379
>gi|417818160|ref|ZP_12464788.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HCUF01]
gi|419827348|ref|ZP_14350847.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
CP1033(6)]
gi|421322153|ref|ZP_15772705.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
CP1038(11)]
gi|421329609|ref|ZP_15780119.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
CP1042(15)]
gi|421337107|ref|ZP_15787568.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
CP1048(21)]
gi|421340535|ref|ZP_15790967.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-20A2]
gi|421348325|ref|ZP_15798702.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-46A1]
gi|423161095|ref|ZP_17148033.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-33A2]
gi|423165923|ref|ZP_17152643.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-48B2]
gi|424602633|ref|ZP_18041772.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
CP1047(20)]
gi|424622963|ref|ZP_18061466.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-47A1]
gi|424657513|ref|ZP_18094797.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-81A2]
gi|340035756|gb|EGQ96734.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HCUF01]
gi|356443588|gb|EHH96407.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-33A2]
gi|356449647|gb|EHI02390.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-48B2]
gi|395917893|gb|EJH28720.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
CP1038(11)]
gi|395928143|gb|EJH38906.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
CP1042(15)]
gi|395932206|gb|EJH42950.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
CP1048(21)]
gi|395939818|gb|EJH50500.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-20A2]
gi|395942904|gb|EJH53580.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-46A1]
gi|395970188|gb|EJH79986.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-47A1]
gi|395974677|gb|EJH84196.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
CP1047(20)]
gi|408051931|gb|EKG87000.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-81A2]
gi|408608138|gb|EKK81541.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
CP1033(6)]
Length = 406
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 131/272 (48%), Gaps = 41/272 (15%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
++A+TG+NGKSTV G + N G++A VGGN+G P AL P ++ V+
Sbjct: 76 VIAITGSNGKSTVTDLSGVLANAAGVKAAVGGNIGVP---------ALDLISPDVELYVL 126
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSH----MVNT-KLG 159
E+SS+Q+E + + LNL+ DH++R++ M++Y K +F H +VN
Sbjct: 127 ELSSFQLETTSSLKL-KAAAFLNLSEDHMDRYQGMEDYRQAKLRIFDHAETAVVNADDTQ 185
Query: 160 LLPFGNQHLNEAIKG----HRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNM 215
P HL G +F+LA + EA A E +
Sbjct: 186 TFPDHAAHLQVVTFGVEQAAQFSLAQHQGREYLFARDEAVMACAE--------------L 231
Query: 216 KVMGRHNYHN--AAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVD 273
++GRHN N +A L G++ + ++AL S + HR Q+V D G+ WV+
Sbjct: 232 SLVGRHNVANVLTVLALLDSAGVNFRLALDALKSYTGL----THRCQVV-ADNHGIKWVN 286
Query: 274 DSKATNLEATCTGLMDLKGH-KCVILLGGQAK 304
DSKATN+ +T L LK + +L+GG K
Sbjct: 287 DSKATNVASTLAALSGLKIEGQLYLLVGGVGK 318
>gi|334144431|ref|YP_004537587.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase
[Thioalkalimicrobium cyclicum ALM1]
gi|333965342|gb|AEG32108.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase
[Thioalkalimicrobium cyclicum ALM1]
Length = 448
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 145/315 (46%), Gaps = 55/315 (17%)
Query: 12 QLKATGLACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIE 71
L+ T L Q G ++ +++ A+ S I+ +TG+NGKSTV + Q+L+ G +
Sbjct: 71 DLRQTWLQVFKQKGIEIIGDIELFARAA--SAPIIGITGSNGKSTVTSLTAQLLSAAGYK 128
Query: 72 AFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTV-SVVLNLTP 130
A +GGN+G P + L + V V+E+SS+Q++ Y TV + VLN+
Sbjct: 129 AGLGGNIGKP-------ALDLLKENQDYDVFVLELSSFQLD--TTYSLHTVAATVLNICE 179
Query: 131 DHLERHKTMKNYALTKCHLFSHMVNTKLGLLP-----------------FGNQHLNEAIK 173
DHL+R+ M Y +K ++ +T+L ++P FG QH
Sbjct: 180 DHLDRYDGMDAYIQSKNTIYQ---DTELAVMPLEEPTHFWVPGITPRYYFGLQH------ 230
Query: 174 GHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSV 233
R + W G+ ID + F A G + + +K+ H NA A V
Sbjct: 231 -PRNSSDW-----GLVIDKQG----FRYLARGEQLIMPVQELKLQAPHQLLNALAALALV 280
Query: 234 LGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGH 293
+ + E + + PHR + V ++ GVTW++DSK TN+ AT T + L +
Sbjct: 281 --DEFAIPPEIIRHVLAEFTGLPHRTEWV-AEMNGVTWINDSKGTNVGATLTAINSLGSN 337
Query: 294 ----KCVILLGGQAK 304
K V+L GG AK
Sbjct: 338 VAPGKLVLLAGGDAK 352
>gi|417821720|ref|ZP_12468334.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HE39]
gi|340039351|gb|EGR00326.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HE39]
Length = 406
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 131/272 (48%), Gaps = 41/272 (15%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
++A+TG+NGKSTV G + N G++A VGGN+G P AL P ++ V+
Sbjct: 76 VIAITGSNGKSTVTDLSGVLANAAGVKAAVGGNIGVP---------ALDLISPDVELYVL 126
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSH----MVNT-KLG 159
E+SS+Q+E + + LNL+ DH++R++ M++Y K +F H +VN
Sbjct: 127 ELSSFQLETTSSLKL-KAAAFLNLSEDHMDRYQGMEDYRQAKLRIFDHAEAAVVNADDTQ 185
Query: 160 LLPFGNQHLNEAIKG----HRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNM 215
P HL G +F+LA + EA A E +
Sbjct: 186 TFPDHAAHLQVVTFGVEQAAQFSLAQHQGREYLFARDEAVMACAE--------------L 231
Query: 216 KVMGRHNYHN--AAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVD 273
++GRHN N +A L G++ + ++AL S + HR Q+V D G+ WV+
Sbjct: 232 SLVGRHNVANVLTVLALLDSAGVNFRLALDALKSYTGL----THRCQVV-ADNHGIKWVN 286
Query: 274 DSKATNLEATCTGLMDLKGH-KCVILLGGQAK 304
DSKATN+ +T L LK + +L+GG K
Sbjct: 287 DSKATNVASTLAALSGLKIEGQLYLLVGGVGK 318
>gi|326391690|ref|ZP_08213215.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Thermoanaerobacter
ethanolicus JW 200]
gi|325992268|gb|EGD50735.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Thermoanaerobacter
ethanolicus JW 200]
Length = 454
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 153/301 (50%), Gaps = 31/301 (10%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V+ E++FA + I A+TGTNGK+T + +G+M + G + +V GN+G PL A
Sbjct: 95 VLGEVEFAYRF--SKAPIYAITGTNGKTTTTSLLGEMFKNAGRKVYVAGNIGYPLIYA-- 150
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
+ +++ F VA E+SS+Q+E K F P +S ++N+TPDHL RHKT ++Y K
Sbjct: 151 ---VMEATEGDFIVA--EISSFQLETI-KEFKPKISCIINITPDHLNRHKTFESYRDIKG 204
Query: 148 HLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDT-----EAKTASFEVP 202
+F + + +L F ++ + N A FP + + K S +
Sbjct: 205 RIFENQRGDEYTVLNF-----DDPVTWSLKNKAKCRVFPFSRKSSLENGAYVKDGSIYIS 259
Query: 203 AVGVVSQ-LQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQI 261
G + + + + + G HN N A+AA SV L G+ + ST++ + HR++
Sbjct: 260 VNGNAKKIIDIEEIYIPGEHNLEN-ALAASSVAYLS-GISANVIASTLKSFKGVEHRIEF 317
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPL 321
V +I GV + +DSK TN +A+ + LK V++ GG K G E F++ ++
Sbjct: 318 VD-EINGVKFYNDSKGTNPDASIKAIQALK-TPIVLIAGGYDK---GSE---FDEFVKAF 369
Query: 322 N 322
N
Sbjct: 370 N 370
>gi|398348161|ref|ZP_10532864.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Leptospira broomii
str. 5399]
Length = 449
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 137/292 (46%), Gaps = 28/292 (9%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V+SE++FA K++ VTGT+GKST + +L+ A GGN+G+ S+
Sbjct: 90 VVSEVEFARAFF--FGKLIGVTGTDGKSTTTALICHLLSKDFPGAQAGGNIGHAFSDFCL 147
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
I L +V+E+SSYQ+E + VSV+LNL PDHLERH T+ NY K
Sbjct: 148 GPIPL---------SVLELSSYQLE-DSGPLSLDVSVILNLAPDHLERHGTLDNYFAAKA 197
Query: 148 HLFSHMVNTKLGLLPFGNQHLNEAIKGHRFN-LAWIGAFPGVKIDTEAKTASFEVPAVGV 206
+ N+ L ++ E I+ + N L IG F G + +A+ E
Sbjct: 198 RIIDK--NSSKHTLIVSSKLFRERIQ--QMNCLCKIGTF-GREEGNDARILDEERIIQTA 252
Query: 207 VSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDI 266
++ N + G HN N + + L+ G + + I PHR Q R
Sbjct: 253 KAEYDAKNFPLPGGHNLENLSASILAAEA--AGGNPVNIQQAISGFMGLPHRFQQAGR-A 309
Query: 267 QGVTWVDDSKATNLEATCTGLMDLKGHKCV-ILLGGQAKVLNGQESNGFEKL 317
GVT+++DSK+TNL + G+ K K ++LGG+ K S FE L
Sbjct: 310 AGVTFINDSKSTNLHSMLAGMSTWKEKKTTCLILGGRPK------SESFEPL 355
>gi|374296029|ref|YP_005046220.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Clostridium
clariflavum DSM 19732]
gi|359825523|gb|AEV68296.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Clostridium
clariflavum DSM 19732]
Length = 464
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 140/285 (49%), Gaps = 21/285 (7%)
Query: 23 QSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPL 82
++G +V SE++ ++ P +I AVTG++GK+T T + +ML G ++GGN+G PL
Sbjct: 99 RNGSQVTSEMEVFFELCPA--QIFAVTGSDGKTTTTTLIYKMLVEQGYNCWLGGNIGTPL 156
Query: 83 SEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNY 142
+ + V+E+SS+Q+ + P V+VV NL P+HL+ HK+M Y
Sbjct: 157 LDRIDEI-------NETDKVVLELSSFQLHTMKR--SPHVAVVTNLAPNHLDVHKSMDEY 207
Query: 143 ALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAK-TASFEV 201
K +++ H ++ F N + I + + + KID+ AK + V
Sbjct: 208 VEAKKNIYLHQTGNDKLVINFDNDITRDFINDAKGKVVYFSRIN--KIDSGAKMKGNMLV 265
Query: 202 PAVGVVSQ--LQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRM 259
+ G + + ++ + G HN N A +V+ V+++ + + HR+
Sbjct: 266 YSDGKEEKEIINADDIVIPGVHNIENYLAAIAAVIDY---VEIDTIRKVATTFKGVEHRI 322
Query: 260 QIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
++V R++ GV + +DS A++ T GL K K +++ GG K
Sbjct: 323 ELV-RELNGVKFYNDSIASSPSRTIAGLNSFK-QKVILIAGGYDK 365
>gi|392940682|ref|ZP_10306326.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Thermoanaerobacter
siderophilus SR4]
gi|392292432|gb|EIW00876.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Thermoanaerobacter
siderophilus SR4]
Length = 414
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 153/302 (50%), Gaps = 31/302 (10%)
Query: 27 RVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAA 86
V+ E++FA + I A+TGTNGK+T + +G+M + G + +V GN+G PL A
Sbjct: 94 EVLGEVEFAYRF--SKAPIYAITGTNGKTTTTSLLGEMFKNAGRKVYVAGNIGYPLIYA- 150
Query: 87 FHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTK 146
+ +++ F VA E+SS+Q+E K F P +S ++N+TPDHL RHKT ++Y K
Sbjct: 151 ----VMEATEGDFIVA--EISSFQLETI-KEFKPKISCIINITPDHLNRHKTFESYRDIK 203
Query: 147 CHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDT-----EAKTASFEV 201
+F + + +L F ++ + N A FP + + K S +
Sbjct: 204 GRIFENQRGDEYTVLNF-----DDPVTWSLKNKAKCRVFPFSRKSSLENGAYVKDGSIYI 258
Query: 202 PAVGVVSQ-LQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQ 260
G + + + + + G HN N A+AA SV L G+ + ST++ + HR++
Sbjct: 259 SVNGNAKKIIDIEEIYIPGEHNLEN-ALAASSVAYLS-GISANVIASTLKSFKGVEHRIE 316
Query: 261 IVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLIEP 320
V +I GV + +DSK TN +A+ + LK V++ GG K G E F++ ++
Sbjct: 317 FVD-EINGVKFYNDSKGTNPDASIKAIQALK-TPIVLIAGGYDK---GSE---FDEFVKA 368
Query: 321 LN 322
N
Sbjct: 369 FN 370
>gi|254525588|ref|ZP_05137640.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Prochlorococcus
marinus str. MIT 9202]
gi|221537012|gb|EEE39465.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Prochlorococcus
marinus str. MIT 9202]
Length = 478
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 145/299 (48%), Gaps = 33/299 (11%)
Query: 16 TGLACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVG 75
T + L + G +V+ E++ A +++ + + +TGTNGK+TV + +L G+ A
Sbjct: 94 TTIIELKKKGIKVVGEINVAWEIL-KDTNWIGITGTNGKTTVTHLLSHILCDNGLYAPFA 152
Query: 76 GNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLER 135
GN+G PL + A C K V E+SSYQ+EI + P + + T DHLER
Sbjct: 153 GNIGTPLCKYA--C---SKKLEKIDWVVAELSSYQIEISPE-VKPNIGIWTTFTEDHLER 206
Query: 136 HKTMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAK 195
HKT++NY K L + + + +++L + H +L+ GV I T
Sbjct: 207 HKTLENYFNIKKSLLEK---SDFRIYNYDDKNL----RNHYSSLS-----RGVWITTSLD 254
Query: 196 TASFEVPAVGVVSQ----------LQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEAL 245
++F + Q +L + G HN N + +V +G+ + +
Sbjct: 255 KSNFIQCDYWIDDQAYIVERGKRLFKLEYFSLRGMHNLQNLLLVIAAV--RKVGLSGKEI 312
Query: 246 NSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
++ + PHRM+ ++++ + ++DSKATN +++ G+ ++G + +I+ GG+ K
Sbjct: 313 KDSLSNYKQLPHRMETIYKN-NYLEIINDSKATNFDSSIAGISSIEG-QMIIIAGGRLK 369
>gi|450180681|ref|ZP_21887376.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans 24]
gi|449248088|gb|EMC46351.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans 24]
Length = 451
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 152/300 (50%), Gaps = 29/300 (9%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L+ V++E++ A + I+ +TG+NGK+T T + +LNH G A + GN+G P
Sbjct: 93 LEKNIPVITEVELAYLI--SEAPIIGITGSNGKTTTTTMIADVLNHAGQSARLSGNIGFP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
SE +A P ++ + V+E+SS+Q+ + + F P ++V+ NL P H++ H + +N
Sbjct: 151 ASE-----VAQPVTEK--DILVMELSSFQL-MGTESFHPHMAVITNLMPTHIDYHGSFEN 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKID---TEAKTAS 198
Y K ++ +M +L F NQ L + + ++ I K+D + +
Sbjct: 203 YIEAKWNIQKNMTEKDFLVLNF-NQDLAKDL-ANQTQAKIIPFSTKEKVDGAYLDGQMLC 260
Query: 199 FEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHR 258
F+ A+ S+L V G HN N A+A ++V L GV EA+ T+ HR
Sbjct: 261 FKGQAIMSASEL-----GVPGSHNVEN-ALATIAVAKLS-GVSNEAIRETLIHFGGVKHR 313
Query: 259 MQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
+Q + +I GV + +DSK+TN+ AT L K +++ GG + N F++L+
Sbjct: 314 LQSLG-NIAGVKFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------GNEFDELV 366
>gi|261211501|ref|ZP_05925789.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio sp. RC341]
gi|260839456|gb|EEX66082.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio sp. RC341]
Length = 440
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 94/326 (28%), Positives = 153/326 (46%), Gaps = 64/326 (19%)
Query: 5 WLFLLEFQLKATGLAC-------LLQSGKRVMSELD-FAAQVIPRSIKILAVTGTNGKST 56
WL + + G+A +L +G V+ +++ FA V ++A+TG+NGKST
Sbjct: 65 WLLSADLVVTNPGIALATPEIQQVLAAGIPVVGDIELFAWHV---DTPVIAITGSNGKST 121
Query: 57 VVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNK 116
V G + N G++A VGGN+G P AL P ++ V+E+SS+Q+E +
Sbjct: 122 VTDLSGVLANAAGVKAAVGGNIGVP---------ALDLISPDVELYVLELSSFQLETTSS 172
Query: 117 YFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSH----MVNTK-----------LGLL 161
+ LNL+ DH++R++ M++Y K +F H +VN L ++
Sbjct: 173 LKL-KAAAFLNLSEDHMDRYQGMEDYRQAKLRIFGHAETAVVNADDTQTFPDHAAHLQVV 231
Query: 162 PFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRH 221
FG +H +F++A + EA A E + ++GRH
Sbjct: 232 TFGVEH------AAQFSVAQHQGREYLFARDEAVMACAE--------------LSLVGRH 271
Query: 222 NYHN--AAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATN 279
N N +A L G++ + ++AL S + HR Q+V D G+ WV+DSKATN
Sbjct: 272 NVANVLTVLALLDSAGVNFRLALDALKSYTGL----THRCQVV-ADNHGIKWVNDSKATN 326
Query: 280 LEATCTGLMDLKGH-KCVILLGGQAK 304
+ +T L LK + +L+GG K
Sbjct: 327 VASTLAALSGLKIEGQLYLLVGGVGK 352
>gi|297581030|ref|ZP_06942955.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Vibrio cholerae
RC385]
gi|297534856|gb|EFH73692.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Vibrio cholerae
RC385]
Length = 444
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 97/324 (29%), Positives = 151/324 (46%), Gaps = 53/324 (16%)
Query: 2 WML-WLFLLEFQLKATGLAC-------LLQSGKRVMSELD-FAAQVIPRSIKILAVTGTN 52
W L WL + + G+A +L +G V+ +++ FA V ++A+TG+N
Sbjct: 65 WNLEWLLNADLVVTNPGIALATPEIQQVLAAGIPVVGDIELFAWHV---DTPVIAITGSN 121
Query: 53 GKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQME 112
GKSTV G + N G++A VGGN+G P AL P + V+E+SS+Q+E
Sbjct: 122 GKSTVTDLSGMLANAAGVKAAVGGNIGVP---------ALDLISPDVDLYVLELSSFQLE 172
Query: 113 IPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSH----MVNT-KLGLLPFGNQH 167
+ + LNL+ DH++R++ M++Y K +F H +VN P H
Sbjct: 173 TTSSLKL-KAAAFLNLSEDHMDRYQGMEDYRQAKLRIFDHAETAVVNADDTQTFPDHAAH 231
Query: 168 LNEAIKG----HRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNY 223
L G +F+LA + EA A E + ++GRHN
Sbjct: 232 LQVVTFGVEQAAQFSLAQHQGREYLFARDEAVMACAE--------------LSLVGRHNV 277
Query: 224 HN--AAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLE 281
N +A L G++ + ++AL S + HR Q+V D G+ WV+DSKATN+
Sbjct: 278 ANVLTVLALLDSAGVNFRLALDALKSYTGL----THRCQVV-ADNHGIKWVNDSKATNVA 332
Query: 282 ATCTGLMDLKGH-KCVILLGGQAK 304
+T L LK + +L+GG K
Sbjct: 333 STLAALSGLKIEGQLYLLVGGVGK 356
>gi|414157064|ref|ZP_11413364.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Streptococcus sp.
F0442]
gi|410868380|gb|EKS16345.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Streptococcus sp.
F0442]
Length = 449
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 142/284 (50%), Gaps = 25/284 (8%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L+ G V++E++ A V I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LEKGIPVLTEVELAYLV--SDAPIIGITGSNGKTTTTTMIGEVLTAAGQGGLLSGNIGFP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A + + +V V+E+SS+Q+ + + F P ++V+ NL P H++ H + ++
Sbjct: 151 ASQVA-------QTATEKEVLVMELSSFQL-MGIEAFHPEIAVITNLMPTHIDYHGSFEH 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAI----KGHRFNLAWIGAFPGVKIDTEAKTA 197
Y K +L +M + +L F NQ L + + K + + G + E
Sbjct: 203 YVAAKWNLQKNMTEKDVIVLNF-NQDLAKELATKTKARVLPFSTVEKVDGAYL--EDGLL 259
Query: 198 SFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPH 257
F+ V ++ + V G HN N A+A ++V + GV+ E + T+ H
Sbjct: 260 KFKGEVV-----MRADEIGVPGSHNVEN-ALATIAVAKVR-GVENEVIKETLSAFGGVKH 312
Query: 258 RMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGG 301
R+Q V +IQGV + +DSK+TN AT L K +++ GG
Sbjct: 313 RLQYVD-EIQGVKFYNDSKSTNSLATQKALSGFDNSKVILIAGG 355
>gi|419834523|ref|ZP_14357978.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-61A2]
gi|423857096|ref|ZP_17720945.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-59A1]
gi|423884370|ref|ZP_17724537.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-60A1]
gi|424017556|ref|ZP_17757382.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-55B2]
gi|424637466|ref|ZP_18075472.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-55A1]
gi|443528361|ref|ZP_21094398.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-78A1]
gi|408022586|gb|EKG59791.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-55A1]
gi|408639700|gb|EKL11507.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-59A1]
gi|408640020|gb|EKL11821.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-60A1]
gi|408649345|gb|EKL20662.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-61A2]
gi|408859063|gb|EKL98732.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-55B2]
gi|443453278|gb|ELT17108.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HC-78A1]
Length = 406
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 97/324 (29%), Positives = 152/324 (46%), Gaps = 53/324 (16%)
Query: 2 WML-WLFLLEFQLKATGLAC-------LLQSGKRVMSELD-FAAQVIPRSIKILAVTGTN 52
W L WL + + G+A +L +G V+ +++ FA V ++A+TG+N
Sbjct: 27 WNLEWLLNADLVVTNPGIALATPEIQQVLAAGIPVVGDIELFAWHV---DTPVIAITGSN 83
Query: 53 GKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQME 112
GKSTV G + N G++A VGGN+G P AL P ++ V+E+SS+Q+E
Sbjct: 84 GKSTVTDLSGVLANAAGVKAAVGGNIGVP---------ALDLISPDVELYVLELSSFQLE 134
Query: 113 IPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSH----MVNT-KLGLLPFGNQH 167
+ + LNL+ DH++R++ M++Y K +F H +VN P H
Sbjct: 135 TTSSLKL-KAAAFLNLSEDHMDRYQGMEDYRQAKLRIFDHAETAVVNADDTQTFPDHAAH 193
Query: 168 LNEAIKG----HRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNY 223
L G +F+LA + EA A E + ++GRHN
Sbjct: 194 LQVVTFGVEQAAQFSLAQHQGREYLFARDEAVMACAE--------------LSLVGRHNV 239
Query: 224 HN--AAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLE 281
N +A L G++ + ++AL S + HR Q+V D G+ WV+DSKATN+
Sbjct: 240 ANVLTVLALLDSAGVNFRLALDALKSYTGL----THRCQVV-ADNHGIKWVNDSKATNVA 294
Query: 282 ATCTGLMDLKGH-KCVILLGGQAK 304
+T L LK + +L+GG K
Sbjct: 295 STLAALSGLKIEGQLYLLVGGVGK 318
>gi|229528610|ref|ZP_04418000.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
12129(1)]
gi|229332384|gb|EEN97870.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
12129(1)]
Length = 467
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 131/272 (48%), Gaps = 41/272 (15%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
++A+TG+NGKSTV G + N G++A VGGN+G P AL P ++ V+
Sbjct: 137 VIAITGSNGKSTVTDLSGVLANAAGVKAAVGGNIGVP---------ALDLISPDVELYVL 187
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSH----MVNT-KLG 159
E+SS+Q+E + + LNL+ DH++R++ M++Y K +F H +VN
Sbjct: 188 ELSSFQLETTSSLKL-KAAAFLNLSEDHMDRYQGMEDYRQAKLRIFDHAETAVVNAYDTQ 246
Query: 160 LLPFGNQHLNEAIKG----HRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNM 215
P HL G +F+LA + EA A E +
Sbjct: 247 TFPDHAAHLQVVTFGVEQAAQFSLAQHQGREYLFARDEAVMACAE--------------L 292
Query: 216 KVMGRHNYHN--AAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVD 273
++GRHN N +A L G++ + ++AL S + HR Q+V D G+ WV+
Sbjct: 293 SLVGRHNVANVLTVLALLDSAGVNFRLALDALKSYTGL----THRCQVV-ADNHGIKWVN 347
Query: 274 DSKATNLEATCTGLMDLKGH-KCVILLGGQAK 304
DSKATN+ +T L LK + +L+GG K
Sbjct: 348 DSKATNVASTLAALSGLKIEGQLYLLVGGVGK 379
>gi|373947900|ref|ZP_09607861.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Shewanella baltica
OS183]
gi|386326252|ref|YP_006022369.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Shewanella baltica
BA175]
gi|333820397|gb|AEG13063.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Shewanella baltica
BA175]
gi|373884500|gb|EHQ13392.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Shewanella baltica
OS183]
Length = 439
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 141/289 (48%), Gaps = 37/289 (12%)
Query: 25 GKRVMSELD-FAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLS 83
G V+ +++ FA ++ R ++ +TG+NGKSTV T VG+M GI VGGN+G P
Sbjct: 90 GIEVIGDVELFAREIADRKPCVIGITGSNGKSTVTTLVGEMAREAGIAVAVGGNIGVP-- 147
Query: 84 EAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYA 143
AL + V+E+SS+Q+E + C V+ LN++ DH++R+ + Y
Sbjct: 148 -------ALDLLHENADLFVLELSSFQLETTHSLKC-VVATCLNISEDHMDRYSDIAAYR 199
Query: 144 LTKCHLF--SHMV----NTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTA 197
K L+ S V + KL + P E + + F LA A D++
Sbjct: 200 EAKLRLYKQSRAVLFNRDDKLTVPP-------EPMNQNSFGLAAPEADEWGISDSKIYHG 252
Query: 198 SFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPH 257
S E+ + + + ++G HN+ N +AA++++ +GVD + + H
Sbjct: 253 SSEI--------MPITEVSLIGSHNHAN-LLAAMALVDA-VGVDKQVMAKVARSFTGLSH 302
Query: 258 RMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGH--KCVILLGGQAK 304
R ++V GVT+V+DSKATN+ AT L L H +++ GG K
Sbjct: 303 RCEVVGIK-NGVTYVNDSKATNVGATVAALDGLSDHLGDIILIAGGDGK 350
>gi|169351140|ref|ZP_02868078.1| hypothetical protein CLOSPI_01919 [Clostridium spiroforme DSM 1552]
gi|169292202|gb|EDS74335.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Clostridium
spiroforme DSM 1552]
Length = 452
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 151/320 (47%), Gaps = 19/320 (5%)
Query: 9 LEFQLKATGL----ACLLQSGKR---VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFV 61
+F +K G+ +L+ KR V +E++ A QV + + VTGTNGK+T VT +
Sbjct: 68 FDFVIKNPGINYHKPFILRLKKRNIPVYTEIELAYQVAKKQ-HYIGVTGTNGKTTTVTLI 126
Query: 62 GQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPT 121
++L + GN+G PL + L V+E+S++Q+ + F P
Sbjct: 127 DKILKGQYQNVHLAGNVGMPLCDIVLDHNLLEEEN---HYIVIEMSNFQL-LDIDTFKPN 182
Query: 122 VSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAW 181
VS ++NLTPDHL+ ++ Y +K +++ + ++ +Q L++ +K +
Sbjct: 183 VSTIINLTPDHLDYMASLDEYYASKTNIYKNTNKNDCFVVNLDDQVLDKYLKQYPIPCKQ 242
Query: 182 IGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVD 241
I + D K + ++ L ++K++G HN N +A D V
Sbjct: 243 ITMSLDNQADCMIKDKAIYYQNEFIID---LDDIKLVGNHNLQNIMIAICIAKKCD--VK 297
Query: 242 VEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGG 301
E +N I HR++ V ++I G+ +DSKATN +A+ L K ++L+GG
Sbjct: 298 NEIINQEIASFIGVEHRIEFV-KEINGIKIYNDSKATNTDASIIALKAFK-QPVILLMGG 355
Query: 302 QAKVLNGQESNGFEKLIEPL 321
K L+ +E + + I+ L
Sbjct: 356 FDKGLDLKEMSTYSNKIKRL 375
>gi|423957693|ref|ZP_17735436.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HE-40]
gi|423985678|ref|ZP_17738992.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HE-46]
gi|408656527|gb|EKL27621.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HE-40]
gi|408663521|gb|EKL34390.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HE-46]
Length = 440
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 131/272 (48%), Gaps = 41/272 (15%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
++A+TG+NGKSTV G + N G++A VGGN+G P AL P ++ V+
Sbjct: 110 VIAITGSNGKSTVTDLSGVLANAAGVKAAVGGNIGVP---------ALDLISPDVELYVL 160
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSH----MVNT-KLG 159
E+SS+Q+E + + LNL+ DH++R++ M++Y K +F H +VN
Sbjct: 161 ELSSFQLETTSSLKL-KAAAFLNLSEDHMDRYQGMEDYRQAKLRIFDHAEAAVVNADDTQ 219
Query: 160 LLPFGNQHLNEAIKG----HRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNM 215
P HL G +F+LA + EA A E +
Sbjct: 220 TFPDHAAHLQVVTFGVEQAAQFSLAQHQGREYLFARDEAVMACAE--------------L 265
Query: 216 KVMGRHNYHN--AAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVD 273
++GRHN N +A L G++ + ++AL S + HR Q+V D G+ WV+
Sbjct: 266 SLVGRHNVANVLTVLALLDSAGVNFRLALDALKSYTGL----THRCQVV-ADNHGIKWVN 320
Query: 274 DSKATNLEATCTGLMDLKGH-KCVILLGGQAK 304
DSKATN+ +T L LK + +L+GG K
Sbjct: 321 DSKATNVASTLAALSGLKIEGQLYLLVGGVGK 352
>gi|304392258|ref|ZP_07374200.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Ahrensia sp.
R2A130]
gi|303296487|gb|EFL90845.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Ahrensia sp.
R2A130]
Length = 463
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/274 (32%), Positives = 130/274 (47%), Gaps = 35/274 (12%)
Query: 41 RSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLG------NPLSEAAFHCIALPS 94
R ++A+TGTNGKST + +L G + +GGN+G +PLSE
Sbjct: 112 RPAPVIAITGTNGKSTTTALIAHVLKQAGRDVQMGGNIGRAVLDLDPLSE---------- 161
Query: 95 SKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMV 154
P QV VVE+SSYQ+++ P V ++LNLTPDHLERH T++NYA K L +
Sbjct: 162 -TPANQVYVVEISSYQIDL-APSIAPHVGLLLNLTPDHLERHGTLENYAGIKERL---VA 216
Query: 155 NTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHN 214
+ L ++ ++H AI G R + + P V I + F +V + +
Sbjct: 217 ASDLAVVGLDDEHC-RAISG-RISASRT---PLVTISKDGAADVFFADGKLIVDGDMVID 271
Query: 215 M----KVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVT 270
+ + G+HN NAA A + +G+ E + S HRM+ + V
Sbjct: 272 LSGVGSLRGQHNGQNAAAAFAAC--RAVGLSSEEIQSGFNSFPGLAHRMEQAGH-VGDVL 328
Query: 271 WVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
+V+DSKATN EA L K + GG AK
Sbjct: 329 FVNDSKATNAEAVAPALSSFP--KVHWIAGGLAK 360
>gi|449935368|ref|ZP_21803329.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans 2ST1]
gi|449967074|ref|ZP_21812605.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans 15VF2]
gi|449980217|ref|ZP_21817076.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans 5SM3]
gi|450071274|ref|ZP_21848066.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans M2A]
gi|450117352|ref|ZP_21864958.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans ST1]
gi|450152976|ref|ZP_21876939.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans 21]
gi|449166654|gb|EMB69581.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans 2ST1]
gi|449169399|gb|EMB72175.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans 15VF2]
gi|449177235|gb|EMB79545.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans 5SM3]
gi|449212556|gb|EMC12917.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans M2A]
gi|449226351|gb|EMC25893.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans ST1]
gi|449239447|gb|EMC38169.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans 21]
Length = 451
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 152/300 (50%), Gaps = 29/300 (9%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L+ V++E++ A + I+ +TG+NGK+T T + +LNH G A + GN+G P
Sbjct: 93 LEKNIPVITEVELAYLI--SEAPIIGITGSNGKTTTTTMIADVLNHAGQSARLSGNIGFP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
SE +A P ++ + V+E+SS+Q+ + + F P ++V+ NL P H++ H + +N
Sbjct: 151 ASE-----VAQPVTEK--DILVMELSSFQL-MGTESFHPHMAVITNLMPTHIDYHGSFEN 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKID---TEAKTAS 198
Y K ++ +M +L F NQ L + + ++ I K+D + +
Sbjct: 203 YIEAKWNIQKNMTEKDFLVLNF-NQDLAKDL-ANQTQAKIIPFSTKEKVDGAYLDGQMLC 260
Query: 199 FEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHR 258
F+ A+ S+L V G HN N A+A ++V L GV EA+ T+ HR
Sbjct: 261 FKGQAIMSASEL-----GVPGSHNVEN-ALATIAVAKLS-GVSNEAIRETLIHFGGVKHR 313
Query: 259 MQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
+Q + +I GV + +DSK+TN+ AT L K +++ GG + N F++L+
Sbjct: 314 LQSLG-NIAGVKFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------GNEFDELV 366
>gi|167614190|gb|ABZ89695.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Buchnera
aphidicola]
Length = 438
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 145/304 (47%), Gaps = 41/304 (13%)
Query: 25 GKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSE 84
G ++S+++ ++ ++ I+++TGTNGKSTV T V + G + ++GGN+G P
Sbjct: 90 GIEIISDIELFSR--ETTVPIISITGTNGKSTVATIVKNIAKKSGYKVYLGGNIGFP--- 144
Query: 85 AAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPT-VSVVLNLTPDHLERHKT-MKNY 142
AL + K + ++E+SS+Q+E N + + +SVVLN+ DHL+R+ + Y
Sbjct: 145 ------ALDMLEKKADLYILELSSFQLE--NIFSLKSKLSVVLNINEDHLDRYPDGFQQY 196
Query: 143 ALTKCHLFSH----MVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTAS 198
K ++ + ++N + F N+H G D++ +S
Sbjct: 197 KKIKLSIYKNSEICLINLREKKYCFKNKHKKYITFGTN--------------DSDYYVSS 242
Query: 199 FEVPAVGVVSQLQLHNMKVMGRH---NYHNAAVAALSVLGLDIGVDVEALNSTIEILRTP 255
+ Q ++ +M H NY NA V+ ++ D + ++
Sbjct: 243 IKDKIFLYYKQKKIFDMSKTSIHEHQNYENALVSLAISDAMNFPRD--KVKYVFSNFKSL 300
Query: 256 PHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCV-ILLGGQAKVLNGQ-ESNG 313
PHR QIVH+ ++W++DSK+TN+ +T L ++ + +LLGG K N Q N
Sbjct: 301 PHRFQIVHKH-NDISWINDSKSTNINSTKIALSNINTKGTIWLLLGGDKKSANFQILKND 359
Query: 314 FEKL 317
EKL
Sbjct: 360 LEKL 363
>gi|449920182|ref|ZP_21798370.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans 1SM1]
gi|449158975|gb|EMB62373.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans 1SM1]
Length = 451
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 150/294 (51%), Gaps = 29/294 (9%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V++E++ A + I+ +TG+NGK+T T + +LNH G A + GN+G P SE
Sbjct: 99 VITEVELAYLI--SEAPIIGITGSNGKTTTTTMIADVLNHAGQSARLSGNIGFPASE--- 153
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
+A P ++ + V+E+SS+Q+ + + F P ++V+ NL P H++ H + +NY K
Sbjct: 154 --VAQPVTEK--DILVMELSSFQL-MGTESFHPHMAVITNLMPTHIDYHGSFENYIEAKW 208
Query: 148 HLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDT---EAKTASFEVPAV 204
++ +M +L F NQ L + + ++ I K+D + + F+ A+
Sbjct: 209 NIQKNMTEKDFLVLNF-NQDLAKDL-ANQTQAKIIPFSTKEKVDGAYLDGQMLCFKGQAI 266
Query: 205 GVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHR 264
S+L V G HN N A+A ++V L GV EA+ T+ HR+Q +
Sbjct: 267 MSASEL-----GVPGSHNVEN-ALATIAVAKLS-GVSNEAIRETLIHFGGVKHRLQSLG- 318
Query: 265 DIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
+I GV + +DSK+TN+ AT L K +++ GG + N F++L+
Sbjct: 319 NIAGVKFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------GNEFDELV 366
>gi|397649275|ref|YP_006489802.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans GS-5]
gi|449908643|ref|ZP_21793867.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans OMZ175]
gi|449991922|ref|ZP_21822098.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans NVAB]
gi|449996510|ref|ZP_21823572.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans A9]
gi|450011793|ref|ZP_21829330.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans A19]
gi|450024083|ref|ZP_21831009.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans U138]
gi|450064063|ref|ZP_21845242.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans NLML5]
gi|450088536|ref|ZP_21854823.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans NV1996]
gi|450109960|ref|ZP_21861820.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans SM6]
gi|450125361|ref|ZP_21867618.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans U2A]
gi|450132356|ref|ZP_21870010.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans NLML8]
gi|392602844|gb|AFM81008.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans GS-5]
gi|449153225|gb|EMB56912.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans NLML8]
gi|449180393|gb|EMB82551.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans NVAB]
gi|449183015|gb|EMB85014.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans A9]
gi|449189095|gb|EMB90773.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans A19]
gi|449192413|gb|EMB93835.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans U138]
gi|449204026|gb|EMC04849.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans NLML5]
gi|449216447|gb|EMC16565.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans NV1996]
gi|449225715|gb|EMC25301.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans SM6]
gi|449232544|gb|EMC31652.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans U2A]
gi|449262780|gb|EMC60223.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans OMZ175]
Length = 451
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 152/300 (50%), Gaps = 29/300 (9%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L+ V++E++ A + I+ +TG+NGK+T T + +LNH G A + GN+G P
Sbjct: 93 LEKNIPVITEVELAYLI--SEAPIIGITGSNGKTTTTTMIADVLNHAGQSARLSGNIGFP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
SE +A P ++ + V+E+SS+Q+ + + F P ++V+ NL P H++ H + +N
Sbjct: 151 ASE-----VAQPVTEK--DILVMELSSFQL-MGTESFHPHMAVITNLMPTHIDYHGSFEN 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDT---EAKTAS 198
Y K ++ +M +L F NQ L + + ++ I K+D + +
Sbjct: 203 YIEAKWNIQKNMTEKDFLVLNF-NQDLAKDL-ANQTQAKIIPFSTKEKVDGAYLDGQMLC 260
Query: 199 FEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHR 258
F+ A+ S+L V G HN N A+A ++V L GV EA+ T+ HR
Sbjct: 261 FKGQAIMSASEL-----GVPGSHNVEN-ALATIAVAKLS-GVSNEAIRETLIHFGGVKHR 313
Query: 259 MQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
+Q + +I GV + +DSK+TN+ AT L K +++ GG + N F++L+
Sbjct: 314 LQSLG-NIAGVKFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------GNEFDELV 366
>gi|450082579|ref|ZP_21852422.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans N66]
gi|449214297|gb|EMC14582.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans N66]
Length = 451
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 152/300 (50%), Gaps = 29/300 (9%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L+ V++E++ A + I+ +TG+NGK+T T + +LNH G A + GN+G P
Sbjct: 93 LEKNIPVITEVELAYLI--SEAPIIGITGSNGKTTTTTMIADVLNHAGQSARLSGNIGFP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
SE +A P ++ + V+E+SS+Q+ + + F P ++V+ NL P H++ H + +N
Sbjct: 151 ASE-----VAQPVTEK--DILVMELSSFQL-MGTESFHPHMAVITNLMPTHIDYHGSFEN 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKID---TEAKTAS 198
Y K ++ +M +L F NQ L + + ++ I K+D + +
Sbjct: 203 YIEAKWNIQKNMTKEDFLVLNF-NQDLAKDL-ANQTQAKIIPFSTKEKVDGAYLDGQMLC 260
Query: 199 FEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHR 258
F+ A+ S+L V G HN N A+A ++V L GV EA+ T+ HR
Sbjct: 261 FKGQAIMSASEL-----GVPGSHNVEN-ALATIAVAKLS-GVSNEAIRETLIHFGGVKHR 313
Query: 259 MQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
+Q + +I GV + +DSK+TN+ AT L K +++ GG + N F++L+
Sbjct: 314 LQSLG-NIAGVKFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------GNEFDELV 366
>gi|449887865|ref|ZP_21787095.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans SA41]
gi|450041219|ref|ZP_21837273.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans T4]
gi|449197948|gb|EMB99084.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans T4]
gi|449251997|gb|EMC49990.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans SA41]
Length = 451
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 150/294 (51%), Gaps = 29/294 (9%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V++E++ A + I+ +TG+NGK+T T + +LNH G A + GN+G P SE
Sbjct: 99 VITEVELAYLI--SEAPIIGITGSNGKTTTTTMIADVLNHAGQSARLSGNIGFPASE--- 153
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
+A P ++ + V+E+SS+Q+ + + F P ++V+ NL P H++ H + +NY K
Sbjct: 154 --VAQPVTEK--DILVMELSSFQL-MGTESFHPHMAVITNLMPTHIDYHGSFENYIEAKW 208
Query: 148 HLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKID---TEAKTASFEVPAV 204
++ +M +L F NQ L + + ++ I K+D + + F+ A+
Sbjct: 209 NIQKNMTEKDFLVLNF-NQDLAKDL-ANQTQAKIIPFSTKEKVDGAYLDGQMLCFKGQAI 266
Query: 205 GVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHR 264
S+L V G HN N A+A ++V L GV EA+ T+ HR+Q +
Sbjct: 267 MSASEL-----GVPGSHNVEN-ALATIAVAKLS-GVSNEAIRETLIHFGGVKHRLQSLG- 318
Query: 265 DIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
+I GV + +DSK+TN+ AT L K +++ GG + N F++L+
Sbjct: 319 NIAGVKFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------GNEFDELV 366
>gi|450033869|ref|ZP_21834020.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans M21]
gi|450078223|ref|ZP_21850907.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans N3209]
gi|449196944|gb|EMB98175.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans M21]
gi|449210272|gb|EMC10742.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans N3209]
Length = 451
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 150/294 (51%), Gaps = 29/294 (9%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V++E++ A + I+ +TG+NGK+T T + +LNH G A + GN+G P SE
Sbjct: 99 VITEVELAYLI--SEAPIIGITGSNGKTTTTTMIADVLNHAGQSARLSGNIGFPASE--- 153
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
+A P ++ + V+E+SS+Q+ + + F P ++V+ NL P H++ H + +NY K
Sbjct: 154 --VAQPVTEK--DILVMELSSFQL-MGTESFHPHMAVITNLMPTHIDYHGSFENYIEAKW 208
Query: 148 HLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDT---EAKTASFEVPAV 204
++ +M +L F NQ L + + ++ I K+D + + F+ A+
Sbjct: 209 NIQKNMTEKDFLVLNF-NQDLAKDL-ANQTQAKIIPFSTKEKVDGAYLDGQMLCFKGQAI 266
Query: 205 GVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHR 264
S+L V G HN N A+A ++V L GV EA+ T+ HR+Q +
Sbjct: 267 MSASEL-----GVPGSHNVEN-ALATIAVAKLS-GVSNEAIRETLIHFGGVKHRLQSLG- 318
Query: 265 DIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
+I GV + +DSK+TN+ AT L K +++ GG + N F++L+
Sbjct: 319 NIAGVKFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------GNEFDELV 366
>gi|24379029|ref|NP_720984.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans UA159]
gi|387786622|ref|YP_006251718.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans LJ23]
gi|449863362|ref|ZP_21778208.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans U2B]
gi|449870278|ref|ZP_21780568.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans 8ID3]
gi|449904587|ref|ZP_21792743.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans M230]
gi|449947996|ref|ZP_21807757.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans 11SSST2]
gi|449953899|ref|ZP_21809149.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans 4VF1]
gi|449984132|ref|ZP_21818849.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans NFSM2]
gi|450048091|ref|ZP_21839644.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans N34]
gi|450137347|ref|ZP_21871586.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans NLML1]
gi|30316024|sp|Q8DVE3.1|MURD_STRMU RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|24376923|gb|AAN58290.1|AE014899_9 putative D-glutamic acid adding enzyme MurD;
UDP-N-acetylmuramoylalanine--D-glutamate ligase
[Streptococcus mutans UA159]
gi|379133023|dbj|BAL69775.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans LJ23]
gi|449156820|gb|EMB60278.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans 8ID3]
gi|449168004|gb|EMB70848.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans 11SSST2]
gi|449171360|gb|EMB74024.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans 4VF1]
gi|449180600|gb|EMB82753.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans NFSM2]
gi|449197152|gb|EMB98359.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans N34]
gi|449235421|gb|EMC34379.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans NLML1]
gi|449259116|gb|EMC56660.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans M230]
gi|449265091|gb|EMC62420.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans U2B]
Length = 451
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 152/300 (50%), Gaps = 29/300 (9%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L+ V++E++ A + I+ +TG+NGK+T T + +LNH G A + GN+G P
Sbjct: 93 LEKNIPVITEVELAYLI--SEAPIIGITGSNGKTTTTTMIADVLNHAGQSARLSGNIGFP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
SE +A P ++ + V+E+SS+Q+ + + F P ++V+ NL P H++ H + +N
Sbjct: 151 ASE-----VAQPVTEK--DILVMELSSFQL-MGTESFHPHMAVITNLMPTHIDYHGSFEN 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDT---EAKTAS 198
Y K ++ +M +L F NQ L + + ++ I K+D + +
Sbjct: 203 YIEAKWNIQKNMTKEDFLVLNF-NQDLAKDL-ANQTQAKIIPFSTKEKVDGAYLDGQMLC 260
Query: 199 FEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHR 258
F+ A+ S+L V G HN N A+A ++V L GV EA+ T+ HR
Sbjct: 261 FKGQAIMSASEL-----GVPGSHNVEN-ALATIAVAKLS-GVSNEAIRETLIHFGGVKHR 313
Query: 259 MQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
+Q + +I GV + +DSK+TN+ AT L K +++ GG + N F++L+
Sbjct: 314 LQSLG-NIAGVKFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------GNEFDELV 366
>gi|450100021|ref|ZP_21858593.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans SF1]
gi|450169802|ref|ZP_21883180.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans SM4]
gi|449220581|gb|EMC20434.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans SF1]
gi|449246659|gb|EMC44957.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans SM4]
Length = 451
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 152/300 (50%), Gaps = 29/300 (9%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L+ V++E++ A + I+ +TG+NGK+T T + +LNH G A + GN+G P
Sbjct: 93 LEKNIPVITEVELAYLI--SEAPIIGITGSNGKTTTTTMIADVLNHAGQSARLSGNIGFP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
SE +A P ++ + V+E+SS+Q+ + + F P ++V+ NL P H++ H + +N
Sbjct: 151 ASE-----VAQPVTEK--DILVMELSSFQL-MGTESFHPHMAVITNLMPTHIDYHGSFEN 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDT---EAKTAS 198
Y K ++ +M +L F NQ L + + ++ I K+D + +
Sbjct: 203 YIEAKWNIQKNMTEKDFLVLNF-NQDLAKDL-ANQTQAKIIPFSTKEKVDGAYLDGQMLC 260
Query: 199 FEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHR 258
F+ A+ S+L V G HN N A+A ++V L GV EA+ T+ HR
Sbjct: 261 FKGQAIMSASEL-----GVPGSHNVEN-ALATIAVAKLS-GVSNEAIRETLIHFGGVKHR 313
Query: 259 MQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
+Q + +I GV + +DSK+TN+ AT L K +++ GG + N F++L+
Sbjct: 314 LQSLG-NIAGVKFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------GNEFDELV 366
>gi|450175250|ref|ZP_21885041.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans SM1]
gi|449247112|gb|EMC45400.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans SM1]
Length = 451
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 150/294 (51%), Gaps = 29/294 (9%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V++E++ A + I+ +TG+NGK+T T + +LNH G A + GN+G P SE
Sbjct: 99 VITEVELAYLI--SEAPIIGITGSNGKTTTTTMIADVLNHAGQSARLSGNIGFPASE--- 153
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
+A P ++ + V+E+SS+Q+ + + F P ++V+ NL P H++ H + +NY K
Sbjct: 154 --VAQPVTEK--DILVMELSSFQL-MGTESFHPHMAVITNLMPTHIDYHGSFENYIEAKW 208
Query: 148 HLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDT---EAKTASFEVPAV 204
++ +M +L F NQ L + + ++ I K+D + + F+ A+
Sbjct: 209 NIQKNMTKEDFLVLNF-NQDLAKDL-ANQTQAKIIPFSTKEKVDGAYLDGQMLCFKGQAI 266
Query: 205 GVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHR 264
S+L V G HN N A+A ++V L GV EA+ T+ HR+Q +
Sbjct: 267 MSASEL-----GVPGSHNVEN-ALATIAVAKLS-GVSNEAIRETLIHFGGVKHRLQSLG- 318
Query: 265 DIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
+I GV + +DSK+TN+ AT L K +++ GG + N F++L+
Sbjct: 319 NIAGVKFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------GNEFDELV 366
>gi|450000058|ref|ZP_21824903.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans N29]
gi|449186302|gb|EMB88141.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans N29]
Length = 451
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 152/300 (50%), Gaps = 29/300 (9%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L+ V++E++ A + I+ +TG+NGK+T T + +LNH G A + GN+G P
Sbjct: 93 LEKNIPVITEVELAYLI--SEAPIIGITGSNGKTTTTTMIADVLNHAGQSARLSGNIGFP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
SE +A P ++ + V+E+SS+Q+ + + F P ++V+ NL P H++ H + +N
Sbjct: 151 ASE-----VAQPVTEK--DILVMELSSFQL-MGTESFHPHMAVITNLMPTHIDYHGSFEN 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKID---TEAKTAS 198
Y K ++ +M +L F NQ L + + ++ I K+D + +
Sbjct: 203 YIEAKWNIQKNMTEKDFLVLNF-NQDLAKDL-ANQTQAKIIPFSTKEKVDGAYLDGQMLC 260
Query: 199 FEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHR 258
F+ A+ S+L V G HN N A+A ++V L GV EA+ T+ HR
Sbjct: 261 FKGQAIMSASEL-----GVPGSHNVEN-ALATIAVAKLS-GVSNEAIRETLIHFGGVKHR 313
Query: 259 MQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
+Q + +I GV + +DSK+TN+ AT L K +++ GG + N F++L+
Sbjct: 314 LQSLG-NIAGVKFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------GNEFDELV 366
>gi|347731713|ref|ZP_08864801.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Desulfovibrio sp.
A2]
gi|347519520|gb|EGY26677.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Desulfovibrio sp.
A2]
Length = 441
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 131/278 (47%), Gaps = 35/278 (12%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V++E++ A + + +LAVTGT+GK+T V+ ML G+ F+GGN+G PLSE
Sbjct: 105 VLAEMELAWRQL-NGEPVLAVTGTSGKTTTVSLCAAMLKAQGLGVFLGGNIGTPLSE--- 160
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
+ +++ P+ V+E+SS+Q++ F P V+++LN++ +HL+ H M Y K
Sbjct: 161 YVLSVADGGPRADALVIEISSFQLQACTT-FRPRVAMLLNVSENHLDYHADMAEYIDAKF 219
Query: 148 HLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVV 207
LF M L + G + L A D + +T F+ A
Sbjct: 220 RLFRCMEEGDLAIFGEGVRDLATA------------------RDLKPRTLFFDAGAK--- 258
Query: 208 SQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIV-HRDI 266
+ +++G HN N A + + GV EA + HR++ V RD
Sbjct: 259 ---RFPQTRLLGGHNLANIEAAWQAC--REFGVTPEAAAKAVADFAPLEHRLETVAERD- 312
Query: 267 QGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
V WV+DSK T +EA L V+++GG+ K
Sbjct: 313 -DVLWVNDSKCTTVEALRVALQAFD-RPVVLMVGGKFK 348
>gi|226313426|ref|YP_002773320.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Brevibacillus
brevis NBRC 100599]
gi|226096374|dbj|BAH44816.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Brevibacillus
brevis NBRC 100599]
Length = 454
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 145/299 (48%), Gaps = 41/299 (13%)
Query: 25 GKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSE 84
G V++E++ A+Q+ I+ +TG+NGK+T T VG + G++A VGGN+G L
Sbjct: 93 GIPVVTEVELASQI--AKAPIIGITGSNGKTTTTTLVGLIFKEAGLDAKVGGNIGTVL-- 148
Query: 85 AAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYAL 144
C + P + V E+SS+Q+ + + F P + V+LNL P HL+ H TM+ Y
Sbjct: 149 ----CGLAEEAGPD-EWLVAELSSFQL-MGTRKFRPHIGVLLNLYPAHLDYHHTMEEYLA 202
Query: 145 TKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWI--------GAF--PGVKIDTEA 194
K +F++ +LP+ + E K ++ + GAF G+ + +
Sbjct: 203 AKLKMFANQTADDAAILPYDQPEIVEKCKDLPASIYYFSKSQEVPKGAFVKDGLILFADG 262
Query: 195 KTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRT 254
+ + A+ ++ L N A+AA+ V L G D + S I++L T
Sbjct: 263 NGNTEPIVAIADITVPHLDN------------ALAAILVAKL-AGADKQ---SIIQVLTT 306
Query: 255 PP---HRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQE 310
P HRM+ V I+GV + +DSKATN EA L K V + GG + ++ +E
Sbjct: 307 FPGVEHRMEFVD-SIRGVKYFNDSKATNPEAASRALQACK-EPVVWICGGLDRGVDFRE 363
>gi|450143389|ref|ZP_21873428.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans 1ID3]
gi|449152348|gb|EMB56058.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans 1ID3]
Length = 451
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 150/294 (51%), Gaps = 29/294 (9%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V++E++ A + I+ +TG+NGK+T T + +LNH G A + GN+G P SE
Sbjct: 99 VITEVELAYLI--SEAPIIGITGSNGKTTTTTMIADVLNHAGQSARLSGNIGFPASE--- 153
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
+A P ++ + V+E+SS+Q+ + + F P ++V+ NL P H++ H + +NY K
Sbjct: 154 --VAQPVTEK--DILVMELSSFQL-MGTESFHPHMAVITNLMPTHIDYHGSFENYIEAKW 208
Query: 148 HLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDT---EAKTASFEVPAV 204
++ +M +L F NQ L + + ++ I K+D + + F+ A+
Sbjct: 209 NIQKNMTKEDFLVLNF-NQDLAKDL-ANQTQAKIIPFSTKEKVDGAYLDGQMLCFKGQAI 266
Query: 205 GVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHR 264
S+L V G HN N A+A ++V L GV EA+ T+ HR+Q +
Sbjct: 267 MSASEL-----GVPGSHNVEN-ALATIAVAKLS-GVSNEAIRETLIHFGGVKHRLQSLG- 318
Query: 265 DIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
+I GV + +DSK+TN+ AT L K +++ GG + N F++L+
Sbjct: 319 NIAGVKFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------GNEFDELV 366
>gi|398813805|ref|ZP_10572496.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Brevibacillus sp.
BC25]
gi|398037858|gb|EJL31035.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Brevibacillus sp.
BC25]
Length = 454
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 145/299 (48%), Gaps = 41/299 (13%)
Query: 25 GKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSE 84
G V++E++ A+Q+ I+ +TG+NGK+T T VG + +G++A VGGN+G L
Sbjct: 93 GIPVVTEVELASQI--AKAPIIGITGSNGKTTTTTLVGLIFKEVGLDAKVGGNIGTVL-- 148
Query: 85 AAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYAL 144
C + P + V E+SS+Q+ + + F P + V+LNL P HL+ H TM+ Y
Sbjct: 149 ----CGLAEEAGPD-EWLVAELSSFQL-MGTREFRPHIGVLLNLYPAHLDYHHTMEEYLA 202
Query: 145 TKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWI--------GAF--PGVKIDTEA 194
K +F++ +LP+ + E K + + GAF G+ + +
Sbjct: 203 AKLKMFANQTADDAAILPYDQPEIVEKCKDLPSAIYYFSKSQEVPKGAFIKDGLILFADG 262
Query: 195 KTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRT 254
+ + A+ ++ L N A+AA+ V L G D + S I++L T
Sbjct: 263 NGNTEPIVAIADITVPHLDN------------ALAAILVAKL-AGADKQ---SIIQVLTT 306
Query: 255 PP---HRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQE 310
P HRM+ V I+GV + +DSKATN EA L K V + GG + ++ +E
Sbjct: 307 FPGVEHRMEFVD-SIRGVKYFNDSKATNPEAASRALQACK-EPVVWICGGLDRGVDFRE 363
>gi|409201093|ref|ZP_11229296.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Pseudoalteromonas
flavipulchra JG1]
Length = 440
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 143/290 (49%), Gaps = 28/290 (9%)
Query: 18 LACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGN 77
+A + G V+ +++ A++ R ++AVTG+NGKSTVVT ++L G++ +GGN
Sbjct: 88 VAAAIAEGVEVIGDIELFARLNTR--PVIAVTGSNGKSTVVTLATEVLKAAGLKVGLGGN 145
Query: 78 LGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK 137
+G + L + V V+E+SS+Q+E + C + +++LN+T DH++R+
Sbjct: 146 IGTSV---------LSLLEQPHDVYVLELSSFQLETTHSLACLS-AMILNITEDHMDRYP 195
Query: 138 TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWI-GAFPGVKIDTEAKT 196
+ Y K ++ H+ + H A G +++ G + + D EA
Sbjct: 196 DFQAYIEAKQRIYQHVEHIVFN----AEDHYTFAQHGQGSSVSLTEGDYHLMTFDGEAYF 251
Query: 197 ASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPP 256
A + P + V + ++GRHN NA + + + ++A S P
Sbjct: 252 AHKQTPLLAV------KTLAMVGRHNQFNALAVLALLAPMQL--SMQAFASAFASFTGLP 303
Query: 257 HRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDL-KGHKCVILL-GGQAK 304
HR Q+V D+ V + +DSKATN+ +T + L G K +IL+ GG AK
Sbjct: 304 HRCQLV-ADVAEVRYFNDSKATNVGSTVAAIDSLASGRKNIILIVGGDAK 352
>gi|398876087|ref|ZP_10631247.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Pseudomonas sp.
GM67]
gi|398882466|ref|ZP_10637434.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Pseudomonas sp.
GM60]
gi|398199008|gb|EJM85958.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Pseudomonas sp.
GM60]
gi|398205379|gb|EJM92163.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Pseudomonas sp.
GM67]
Length = 448
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 145/295 (49%), Gaps = 40/295 (13%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+A++G+N KSTV T VG+M G VGGNLG P AL + ++ V+
Sbjct: 111 IVAISGSNAKSTVTTLVGEMAAAAGKRVAVGGNLGTP---------ALDLLRDDIELYVM 161
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLF----SHMVNTKLGL 160
E+SS+Q+E ++ V+ VLN++ DH++R+ + Y L K +F +VN + L
Sbjct: 162 ELSSFQLETTDQ-LNAEVATVLNVSEDHMDRYSGLPAYHLAKHRIFRGARQFVVNRQDAL 220
Query: 161 LPFGNQHLNEAIKGHRFNLAW--IGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVM 218
+ E F L+ AF G++ + K +FE + + + +K+
Sbjct: 221 ---SRPLMGEGQPCWTFGLSKPDFKAF-GIREEDGEKYLAFEFQNL-----MPVRELKIR 271
Query: 219 GRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKAT 278
G HN NA A G +G+ +A+ S++ HR Q V RD+ GV++ +DSKAT
Sbjct: 272 GAHNQSNALAALAL--GHAVGLPFDAMLSSLRTFAGLEHRCQWV-RDLDGVSYYNDSKAT 328
Query: 279 NLEATCTGL----MDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPLNHH-RCVI 328
N+ A + D+ G K V++ GG K G E F L +P+ + R VI
Sbjct: 329 NVGAALAAIEGLGADIDG-KVVLIAGGDGK---GAE---FNDLRDPVAANCRAVI 376
>gi|319900364|ref|YP_004160092.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Bacteroides
helcogenes P 36-108]
gi|319415395|gb|ADV42506.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Bacteroides
helcogenes P 36-108]
Length = 444
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 149/303 (49%), Gaps = 26/303 (8%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
L + G V+SE++FA + K++ +TG+NGK+T + + + G+ + GN+GN
Sbjct: 82 LKEKGTPVISEIEFAGRYT--DAKMVCITGSNGKTTTTSLIYHIFKSAGLNVGLAGNIGN 139
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDHLERHK-T 138
L AL + K ++E+SS+Q++ N Y F ++V++N+TPDHL+R+
Sbjct: 140 SL--------ALQVATEKHDYYIIELSSFQLD--NMYRFRANIAVLMNITPDHLDRYDHC 189
Query: 139 MKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKID---TEAK 195
M+NY K + + + + + + H A + F VK D +
Sbjct: 190 MQNYIDAKFRITRNQTPDDAFIYWNDDPIIKRELAKHGLK-AHLYPFASVKEDGAIAYVE 248
Query: 196 TASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTP 255
E+ A + ++ + + G HN +N+ A +S L G++ E + + +
Sbjct: 249 DGEIEINA-PIAFNMEQEELALRGTHNLYNSLAAGISA-NL-AGIEKEYIRKALSDFKGV 305
Query: 256 PHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFE 315
HR++ V D++G+ +++DSKATN+ + L + K V++LGG+ K G + E
Sbjct: 306 EHRLEKVC-DVRGIHFINDSKATNVNSCWYALQSMTT-KTVLILGGKDK---GNDYTEIE 360
Query: 316 KLI 318
L+
Sbjct: 361 DLV 363
>gi|384209182|ref|YP_005594902.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Brachyspira
intermedia PWS/A]
gi|343386832|gb|AEM22322.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Brachyspira
intermedia PWS/A]
Length = 471
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 143/285 (50%), Gaps = 26/285 (9%)
Query: 27 RVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAA 86
+++ E++FA IP +AVTGT+GK+T VT + +++ +A + GN+GN S+
Sbjct: 111 KIIGEIEFAYNFIPNR-NYIAVTGTDGKTTTVTLIHEIIKSYK-KARLLGNVGNTFSKE- 167
Query: 87 FHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTK 146
+ + +P + ++E+SS+Q+E K F ++ +LN+ DHL+R++ +++Y TK
Sbjct: 168 -----IETIEPDEDI-ILELSSFQLETVEK-FHAHIAAILNIAEDHLDRYRDIEDYFNTK 220
Query: 147 CHLFSHMVNTKLGLLPFGN-------QHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASF 199
++ + +L + N LN K + F + + E + +
Sbjct: 221 KNIIINQNKNDFLVLNYDNIYTNIWYNELNGNSKSKLLTFSLKSKFATIYYNEEDEYIYY 280
Query: 200 EVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRM 259
E + + N K++G+HN N A L + L G+ + + + + HR+
Sbjct: 281 ENEKL-----FSIANRKLIGKHNIANILAAVL--ICLKDGIPADNIEKVVNNFKGIEHRV 333
Query: 260 QIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
++V +I GV +++DSKAT++ + + L ++++GG+ K
Sbjct: 334 ELVS-EINGVKYINDSKATSMNSVMSALKSF-DKDIILIMGGRNK 376
>gi|449893780|ref|ZP_21788926.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans SF12]
gi|449255685|gb|EMC53530.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans SF12]
Length = 451
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 142/277 (51%), Gaps = 27/277 (9%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+ +TG+NGK+T T + +LNH G A + GN+G P SE +A P ++ + V+
Sbjct: 114 IIGITGSNGKTTTTTMIADVLNHAGQSARLSGNIGFPASE-----VAQPVTEK--DILVM 166
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFG 164
E+SS+Q+ + + F P ++V+ NL P H++ H + +NY K ++ +M +L F
Sbjct: 167 ELSSFQL-MGTESFHPHMAVITNLMPTHIDYHGSFENYIEAKWNIQKNMTEKDFLVLNF- 224
Query: 165 NQHLNEAIKGHRFNLAWIGAFPGVKIDT---EAKTASFEVPAVGVVSQLQLHNMKVMGRH 221
NQ L + + ++ I K+D + + F+ A+ S+L V G H
Sbjct: 225 NQDLAKDL-ANQTQAKIIPFSTKEKVDGAYLDGQMLCFKGQAIMSASEL-----GVPGSH 278
Query: 222 NYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLE 281
N N A+A ++V L GV EA+ T+ HR+Q + +I GV + +DSK+TN+
Sbjct: 279 NVEN-ALATIAVAKLS-GVSNEAIRETLIHFGGVKHRLQSLG-NIAGVKFYNDSKSTNIL 335
Query: 282 ATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
AT L K +++ GG + N F++L+
Sbjct: 336 ATQKALSGFDNSKVILIAGGLDR------GNEFDELV 366
>gi|345881464|ref|ZP_08832982.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Prevotella oulorum
F0390]
gi|343919429|gb|EGV30176.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Prevotella oulorum
F0390]
Length = 443
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 158/316 (50%), Gaps = 38/316 (12%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
L+Q G ++SE++FA + K++ +TG+NGK+T + + + G++ + GN+G
Sbjct: 82 LMQQGTPIISEIEFAGRYT--HAKMVCITGSNGKTTTTSLIYHIFKTAGLDVGLAGNIG- 138
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDHLERHKT- 138
H +AL ++ + V+E+SS+Q++ N Y F V+++LN+TPDHL+R+
Sbjct: 139 -------HSLALQVAESPHEYYVIELSSFQLD--NMYQFKADVAILLNITPDHLDRYDNC 189
Query: 139 MKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFP-------GVKID 191
+NYA K + + + + + + ++ H + +P GV
Sbjct: 190 FENYAEAKLRILQNQTQADSFIYWKDDPVIAKELQKHAVHAK---TYPFAAHKENGVVGY 246
Query: 192 TEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEI 251
E + + P+ + Q +L + G+HN +N+ A L+ + I D+ + ++
Sbjct: 247 IEQEQYTLAYPSTFQMPQSEL---SLTGKHNLYNSLAAGLAANIVGIPHDI--IRQSLSD 301
Query: 252 LRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQES 311
HR++ V + + V +++DSKATN++A C ++ +++LGG+ K
Sbjct: 302 FPGVEHRLEKVCK-VNNVLYINDSKATNVDA-CWYALESMTTPTILILGGRDK------G 353
Query: 312 NGFEKLIEPLNHHRCV 327
N ++ L+ PL RCV
Sbjct: 354 NDYKPLL-PLVKERCV 368
>gi|450160942|ref|ZP_21880270.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans 66-2A]
gi|449239404|gb|EMC38127.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans 66-2A]
Length = 451
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 150/294 (51%), Gaps = 29/294 (9%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V++E++ A + I+ +TG+NGK+T T + +LNH G A + GN+G P SE
Sbjct: 99 VITEVELAYLI--SEAPIIGITGSNGKTTTTTMIADVLNHAGQSARLSGNIGFPASE--- 153
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
+A P ++ + V+E+SS+Q+ + + F P ++V+ NL P H++ H + +NY K
Sbjct: 154 --VAQPVTEK--DILVMELSSFQL-MGTESFHPHMAVITNLMPTHIDYHGSFENYIEAKW 208
Query: 148 HLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDT---EAKTASFEVPAV 204
++ +M +L F NQ L + + ++ I K+D + + F+ A+
Sbjct: 209 NIQKNMTKEDFLVLNF-NQDLAKDL-ANQTQAKIIPFSTKEKVDGAYLDGQMLCFKGQAI 266
Query: 205 GVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHR 264
S+L V G HN N A+A ++V L GV EA+ T+ HR+Q +
Sbjct: 267 MSASEL-----GVPGSHNVEN-ALATIAVAKLS-GVSNEAIRETLIHFGGVKHRLQSLG- 318
Query: 265 DIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
+I GV + +DSK+TN+ AT L K +++ GG + N F++L+
Sbjct: 319 NIAGVKFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------GNEFDELV 366
>gi|213019467|ref|ZP_03335273.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Wolbachia
endosymbiont of Culex quinquefasciatus JHB]
gi|212994889|gb|EEB55531.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Wolbachia
endosymbiont of Culex quinquefasciatus JHB]
Length = 443
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 142/283 (50%), Gaps = 34/283 (12%)
Query: 27 RVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAA 86
++ S+++ + + K++ +TGTNGKST + +G +L G + +GGNLG P+ +
Sbjct: 93 KIKSDIELFLETKTTNQKVIGITGTNGKSTTTSLIGHILKSTGKKVAIGGNLGMPILDL- 151
Query: 87 FHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTK 146
+ ++ V+E SS+Q+E+ N+ +SV+LN+TPDH++RH +M NY TK
Sbjct: 152 ---------ERDAEIYVIEFSSFQLELMNE-INVDISVLLNITPDHIDRHGSMNNYIATK 201
Query: 147 CHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGV 206
L + +K+ ++ N+ I FN F G KI A +
Sbjct: 202 LKLIN---GSKIAVIGCDNK-----ITSDVFN-----KFTGNKIPISASMSPSLSSQCLG 248
Query: 207 VSQLQLHNMKVMGRH-----NYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQI 261
+L+ H++ V N N VAA +V L +GVD + + I+ HR +
Sbjct: 249 TGKLENHSLSVSDVKINLVSNVEN-IVAAHAVCKL-LGVDSSTIVNEIKSFPGLRHRNEF 306
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
+ + I V +++DSKATN E+T ++ K ++GG++K
Sbjct: 307 LGK-IHNVLFINDSKATNAESTEKAILSYKN--IYWIVGGKSK 346
>gi|449928887|ref|ZP_21801394.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans 3SN1]
gi|449164959|gb|EMB67993.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans 3SN1]
Length = 451
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 150/294 (51%), Gaps = 29/294 (9%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V++E++ A + I+ +TG+NGK+T T + +LNH G A + GN+G P SE
Sbjct: 99 VITEVELAYLI--SEAPIIGITGSNGKTTTTTMIADVLNHAGQSARLSGNIGFPASE--- 153
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
+A P ++ + V+E+SS+Q+ + + F P ++V+ NL P H++ H + +NY K
Sbjct: 154 --VAQPVTEK--DILVMELSSFQL-MGTESFHPHMAVITNLMPTHIDYHGSFENYIEAKW 208
Query: 148 HLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDT---EAKTASFEVPAV 204
++ +M +L F NQ L + + ++ I K+D + + F+ A+
Sbjct: 209 NIQKNMTEKDFLVLNF-NQDLAKDL-ANQTQAKIIPFSTKEKVDGAYLDGQMLCFKGQAI 266
Query: 205 GVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHR 264
S+L V G HN N A+A ++V L GV EA+ T+ HR+Q +
Sbjct: 267 MSASEL-----GVPGSHNVEN-ALATIAVAKLS-GVSNEAIRETLIHFGGVKHRLQSLG- 318
Query: 265 DIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
+I GV + +DSK+TN+ AT L K +++ GG + N F++L+
Sbjct: 319 NIAGVKFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------GNEFDELV 366
>gi|421352109|ref|ZP_15802474.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HE-25]
gi|395952554|gb|EJH63168.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HE-25]
Length = 440
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 97/324 (29%), Positives = 151/324 (46%), Gaps = 53/324 (16%)
Query: 2 WML-WLFLLEFQLKATGLAC-------LLQSGKRVMSELD-FAAQVIPRSIKILAVTGTN 52
W L WL + + G+A +L +G V+ +++ FA V ++A+TG+N
Sbjct: 61 WNLEWLLNADLVVTNPGIALATPEIQQVLAAGIPVVGDIELFAWHV---DTPVIAITGSN 117
Query: 53 GKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQME 112
GKSTV G + N G++A VGGN+G P AL P ++ V+E+SS+Q+E
Sbjct: 118 GKSTVTDLSGVLANAAGVKAAVGGNIGVP---------ALDLISPDVELYVLELSSFQLE 168
Query: 113 IPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSH----MVNT-KLGLLPFGNQH 167
+ LNL+ DH++R++ M++Y K +F H +VN P H
Sbjct: 169 TTSSLKL-KAGAFLNLSEDHMDRYQGMEDYRQAKLRIFDHAETAVVNADDTQTFPDHAAH 227
Query: 168 LNEAIKG----HRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNY 223
L G +F+LA + EA A E + ++GRHN
Sbjct: 228 LQVVTFGVEQAAQFSLAQHQGREYLFARDEAVMACAE--------------LSLVGRHNV 273
Query: 224 HN--AAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLE 281
N +A L G++ + ++AL S + HR Q+V D G+ WV+DSKATN+
Sbjct: 274 ANVLTVLALLDSAGVNFRLALDALKSYTGL----THRCQVV-ADNHGIKWVNDSKATNVA 328
Query: 282 ATCTGLMDLKGH-KCVILLGGQAK 304
+T L LK + +L+GG K
Sbjct: 329 STLAALSGLKIEGQLYLLVGGVGK 352
>gi|418089085|ref|ZP_12726243.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA43265]
gi|418116417|ref|ZP_12753391.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae 6963-05]
gi|419439903|ref|ZP_13979957.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA40410]
gi|353762772|gb|EHD43330.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA43265]
gi|353790255|gb|EHD70638.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae 6963-05]
gi|379580514|gb|EHZ45404.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA40410]
Length = 450
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 147/297 (49%), Gaps = 23/297 (7%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L G V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LAKGIPVLTEVELAYLI--SEAPIIGITGSNGKTTTTTMIGEVLTAAGQHGLLSGNIGYP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A + S K + V+E+SS+Q+ + + F P ++V+ NL P H++ H +
Sbjct: 151 ASQVA----QIASDK---DMLVMELSSFQL-MGVQEFHPEIAVITNLMPTHIDYHGSFSE 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEV 201
Y K ++ + M +L F NQ L + + A + F ++ A ++
Sbjct: 203 YVAAKWNIQNKMTAADFLVLNF-NQDLAKDLTSK--TEATVVPFSTLEKVDGAYLEDGQL 259
Query: 202 PAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQI 261
G V + + + V G HN N A+A ++V L GVD + + T+ HR+Q
Sbjct: 260 YFRGEVV-MAANEIGVPGSHNVEN-ALATIAVAKLR-GVDNQTIKETLSAFGGVKHRLQF 316
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
V DI+GV + +DSK+TN+ AT L K V++ GG + N F++L+
Sbjct: 317 VD-DIKGVKFYNDSKSTNILATQKALSGFDNSKVVLIAGGLDR------GNEFDELV 366
>gi|392307113|ref|ZP_10269647.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Pseudoalteromonas
citrea NCIMB 1889]
Length = 441
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 156/319 (48%), Gaps = 42/319 (13%)
Query: 13 LKATGLACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEA 72
L + +A + G V+ +++ A++ + ++AVTG+NGKSTVV+ ++ G++
Sbjct: 83 LYESSVAHAIAKGVEVIGDIELFARL--NTTPVVAVTGSNGKSTVVSLATEVFKAAGLKV 140
Query: 73 FVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDH 132
+GGN+G + L V V+E+SS+Q+E + C + +++LN+T DH
Sbjct: 141 GLGGNIGTSV---------LTLLDEPHDVYVLELSSFQLETTDSLVCRS-AMILNVTEDH 190
Query: 133 LERHKTMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGV---- 188
++R+ Y K ++ H+ Q + A + F+ + G V
Sbjct: 191 MDRYPDFAGYCAAKQRIYKHV-----------EQLVFNADDEYTFSASKQGTSVSVDSGD 239
Query: 189 -KIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNS 247
++ T+ A F A G V L + ++ V+GRHN N A+A +++L + +E
Sbjct: 240 YRVLTDNGMAYFS--AYGEV-LLPVDSLGVVGRHNQFN-ALAVMALLA-PFNLPIEHFKQ 294
Query: 248 TIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDL--KGHKCVILLGGQAKV 305
+ + HR Q+V + QGV + +DSKATN+ AT L L + K +++LGG AK
Sbjct: 295 AFKSFKGLEHRCQLV-AEFQGVRYFNDSKATNVGATVAALESLACERGKILLILGGDAKG 353
Query: 306 LNGQESNGFEKLIEPLNHH 324
+ + L+ PL +
Sbjct: 354 AD------LQPLVTPLTRY 366
>gi|282850404|ref|ZP_06259783.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Veillonella
parvula ATCC 17745]
gi|282579897|gb|EFB85301.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Veillonella
parvula ATCC 17745]
Length = 456
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/288 (33%), Positives = 147/288 (51%), Gaps = 27/288 (9%)
Query: 25 GKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSE 84
G V+SE++ A +V I+AVTGTNGK+T T + ++L G VGGN+G+ LSE
Sbjct: 92 GIDVVSEVELAYEV--SKSPIVAVTGTNGKTTTTTLLTKVLEGSGKPVHVGGNIGDSLSE 149
Query: 85 AAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYAL 144
A+ S P V E+SSYQ+E KYF P +++LN+TPDHL RHKTM+NY
Sbjct: 150 VAY-------SMPAGGFLVAELSSYQLETI-KYFRPIGAIMLNITPDHLARHKTMENYIA 201
Query: 145 TKCHLFSHMVNTKLGLLPFGN---QHLNEAIKGHRFNLAWIGAFP--GVKIDTEAKTASF 199
K +F + ++T +L + + H ++ A D + A
Sbjct: 202 AKERIFENQLSTDYLVLNIDDPVVADMEHRAPSHILKISQKKAVENGAYYADGQCYIAKD 261
Query: 200 EVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLD--IGVDVEALNSTIEILRTPPH 257
V A V++ +H + G HN N L+V+ L +GV VE ++ I H
Sbjct: 262 GV-AKFVIADEDIH---IPGSHNIEN----ILTVIALSHALGVPVETIHRIISEFHGVEH 313
Query: 258 RMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKV 305
R++ V + I G+T+ +DSKATN+++ L + ++L GG K+
Sbjct: 314 RLERV-KTIDGITFYNDSKATNVDSVVKALESFD-QQVILLAGGHDKM 359
>gi|154494018|ref|ZP_02033338.1| hypothetical protein PARMER_03363 [Parabacteroides merdae ATCC
43184]
gi|154086278|gb|EDN85323.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Parabacteroides
merdae ATCC 43184]
Length = 453
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 155/317 (48%), Gaps = 29/317 (9%)
Query: 14 KATGLACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAF 73
KA + L + G ++SE++FA + K++ +TG+NGK+T +L G++A
Sbjct: 84 KAPIIKKLKEKGTPIISEIEFAGRYT--DAKMICITGSNGKTTTTMLTYHILRQAGVDAG 141
Query: 74 VGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDH 132
+ GN+GN L AL ++ V V+E+SS+Q++ N Y F ++++LN+TPDH
Sbjct: 142 LAGNVGNSL--------ALQVAEDPHAVYVIELSSFQLD--NMYDFKADIAILLNITPDH 191
Query: 133 LERHK-TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAF-----P 186
L+R+ M+NY K + + + + + I R A + F
Sbjct: 192 LDRYNYEMQNYVDAKFRIIRNQTAEDAFIFWNDDPIIAREI-AKRHPQATLYPFAETHEA 250
Query: 187 GVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALN 246
GVK TE K E + L + + G HN +N+ + ++ +DI E L
Sbjct: 251 GVKGYTEDKKIIIETSNGTFTMEEDL--LALSGTHNLYNSLASGIASKLVDIH--DENLR 306
Query: 247 STIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVL 306
+++ HR++ V R ++GV +++DSKATN+ + L + V++LGG K
Sbjct: 307 ASLSDFTGVEHRLEKVAR-VRGVDYINDSKATNVNSCWYALQSMTT-PLVLILGGTDK-- 362
Query: 307 NGQESNGFEKLIEPLNH 323
G + + E+L++ H
Sbjct: 363 -GNDYSEIEELVKKKVH 378
>gi|294792042|ref|ZP_06757190.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Veillonella sp.
6_1_27]
gi|294457272|gb|EFG25634.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Veillonella sp.
6_1_27]
Length = 456
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/284 (32%), Positives = 145/284 (51%), Gaps = 19/284 (6%)
Query: 25 GKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSE 84
G V+SE++ A +V I+AVTGTNGK+T T + ++L G VGGN+G+ LSE
Sbjct: 92 GIDVVSEVELAYEV--SKSPIVAVTGTNGKTTTTTLLTKVLEGSGKPVHVGGNIGDSLSE 149
Query: 85 AAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYAL 144
A+ S P V E+SSYQ+E KYF P +++LN+TPDHL RHKTM+NY
Sbjct: 150 VAY-------SMPAGGFLVAELSSYQLETI-KYFRPIGAIMLNITPDHLARHKTMENYIA 201
Query: 145 TKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAV 204
K +F + ++T +L + + + ++ I V+ +
Sbjct: 202 AKERIFENQLSTDYLVLNIDDPVVADMEHRSSSHILKISQKKAVENGAYYADGQCYIAKD 261
Query: 205 GVVS-QLQLHNMKVMGRHNYHNAAVAALSVLGLD--IGVDVEALNSTIEILRTPPHRMQI 261
GV + ++ + G HN N L+V+ L +GV VE ++ I HR++
Sbjct: 262 GVAKFVIGNEDIHIPGSHNIEN----ILTVIALSHALGVPVETIHRIISEFHGVEHRLER 317
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKV 305
V + I G+T+ +DSKATN+++ L + ++L GG K+
Sbjct: 318 V-KTIDGITFYNDSKATNVDSVVKALESFD-QQVILLAGGHDKM 359
>gi|168492843|ref|ZP_02716986.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae CDC3059-06]
gi|418073537|ref|ZP_12710797.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA11184]
gi|418078185|ref|ZP_12715408.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae 4027-06]
gi|418081069|ref|ZP_12718279.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae 6735-05]
gi|418098060|ref|ZP_12735160.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae 6901-05]
gi|418104737|ref|ZP_12741797.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA44500]
gi|418114179|ref|ZP_12751170.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae 5787-06]
gi|418173050|ref|ZP_12809664.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA41277]
gi|418216139|ref|ZP_12842863.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae Netherlands15B-37]
gi|419431090|ref|ZP_13971236.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae EU-NP05]
gi|419433351|ref|ZP_13973470.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA40183]
gi|419464151|ref|ZP_14004044.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA04175]
gi|419497634|ref|ZP_14037342.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA47522]
gi|419534128|ref|ZP_14073635.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA17457]
gi|421280675|ref|ZP_15731474.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA04672]
gi|421309119|ref|ZP_15759748.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA62681]
gi|183576912|gb|EDT97440.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae CDC3059-06]
gi|353747376|gb|EHD28032.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae 4027-06]
gi|353751114|gb|EHD31747.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA11184]
gi|353751808|gb|EHD32439.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae 6735-05]
gi|353770425|gb|EHD50938.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae 6901-05]
gi|353779171|gb|EHD59637.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA44500]
gi|353787477|gb|EHD67879.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae 5787-06]
gi|353839749|gb|EHE19823.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA41277]
gi|353873190|gb|EHE53051.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae Netherlands15B-37]
gi|379539370|gb|EHZ04549.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA04175]
gi|379568162|gb|EHZ33144.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA17457]
gi|379577481|gb|EHZ42400.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA40183]
gi|379599898|gb|EHZ64680.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA47522]
gi|379632334|gb|EHZ96910.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae EU-NP05]
gi|395884032|gb|EJG95074.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA04672]
gi|395911863|gb|EJH22727.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA62681]
Length = 450
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 146/297 (49%), Gaps = 23/297 (7%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L G V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LAKGIPVLTEVELAYLI--SEAPIIGITGSNGKTTTTTMIGEVLTAAGQHGLLSGNIGYP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A + S K V+E+SS+Q+ + + F P ++V+ NL P H++ H +
Sbjct: 151 ASQVA----QIASDKDTL---VMELSSFQL-MGVQEFHPEIAVITNLMPTHIDYHGSFSE 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEV 201
Y K ++ + M +L F NQ L + + A + F ++ A ++
Sbjct: 203 YVAAKWNIQNKMTAADFLVLNF-NQDLAKDLTSK--TEATVVPFSTLEKVDGAYLEDGQL 259
Query: 202 PAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQI 261
G V + + + V G HN N A+A ++V L GVD + + T+ HR+Q
Sbjct: 260 YFRGEVV-MAANEIGVPGSHNVEN-ALATIAVAKLR-GVDNQTIKETLSAFGGVKHRLQF 316
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
V DI+GV + +DSK+TN+ AT L K V++ GG + N F++L+
Sbjct: 317 VD-DIKGVKFYNDSKSTNILATQKALSGFDNSKVVLIAGGLDR------GNEFDELV 366
>gi|157803837|ref|YP_001492386.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Rickettsia
canadensis str. McKiel]
gi|157785100|gb|ABV73601.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Rickettsia
canadensis str. McKiel]
Length = 455
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 138/281 (49%), Gaps = 27/281 (9%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
+ S++D + R++ +AV GTNGKST + +LN G++ V GN+G P +A
Sbjct: 90 ITSDIDLLFEK-SRNLNFIAVIGTNGKSTTTALISHILNSNGLDYPVAGNIGVPALKA-- 146
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
+SK + V+E+SS+Q+++ K F ++V+LN+TPDHL+RHK M Y K
Sbjct: 147 -----KNSKDGY---VIELSSFQLDLV-KTFTAKIAVLLNITPDHLDRHKDMNGYIKAKS 197
Query: 148 HLFSHMVNTKLGLLPFGNQHLNEA-IKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGV 206
+F+ M ++ N + + +K + + F KI + + +
Sbjct: 198 KIFNRMDKNSYAVINIDNDYCRKIFMKLQQEQRIKLIPFSVTKILEKGISVVNNIINYSF 257
Query: 207 V--SQLQL-HNMKVMGRHNYHN--AAVAALSVLGLDIGVD-VEALNSTIEILRTPPHRMQ 260
S +L N + G HN N A+ A ++GL+ +EA++S ++ PHRMQ
Sbjct: 258 FGNSNFKLPFNKNLQGIHNCENIAASYAVAKIMGLEESTKIIEAISS----FQSLPHRMQ 313
Query: 261 IVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGG 301
+ I +++ +DSKATN + L +K + L G
Sbjct: 314 YIGS-INNISFYNDSKATN---AISALQSIKALDNIYWLAG 350
>gi|218886060|ref|YP_002435381.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Desulfovibrio
vulgaris str. 'Miyazaki F']
gi|226711908|sp|B8DP81.1|MURD_DESVM RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|218757014|gb|ACL07913.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Desulfovibrio
vulgaris str. 'Miyazaki F']
Length = 445
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 127/278 (45%), Gaps = 31/278 (11%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
+M+E++ A + + +LAVTGT+GK+T V+ ML G+ F+GGN+G PLSE
Sbjct: 105 IMAEMELAWRQLDGE-PVLAVTGTSGKTTTVSLCAAMLRAQGLSVFLGGNIGTPLSEYVL 163
Query: 88 HCI-ALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTK 146
+ + V V+E+SS+Q++ F P V+++LN++ +HL+ H M Y K
Sbjct: 164 SVAHGGADGQGRADVLVIEISSFQLQACTT-FRPRVAMLLNISENHLDYHADMAEYIDAK 222
Query: 147 CHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGV 206
LF M L + G + L A D + +T F+ A
Sbjct: 223 FRLFRCMEEGDLAIFGQGVRDLVAA------------------RDLKPRTLFFDAAA--- 261
Query: 207 VSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDI 266
+ ++G HN N A + + GV EA + HR++ V +
Sbjct: 262 ---RRFPRTCLLGGHNQANIEAAWQAC--REFGVTPEAAEKAVADFAPMEHRLEAVA-ER 315
Query: 267 QGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
GV WV+DSK T +EA L V+++GG+ K
Sbjct: 316 NGVLWVNDSKCTTVEALRVALQAFD-RPVVLMVGGKFK 352
>gi|421485324|ref|ZP_15932883.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Achromobacter
piechaudii HLE]
gi|400196243|gb|EJO29220.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Achromobacter
piechaudii HLE]
Length = 510
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 105/329 (31%), Positives = 149/329 (45%), Gaps = 52/329 (15%)
Query: 27 RVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAA 86
R +++L + PR +LAVTGTNGK+TV +++ G+ GN+ A
Sbjct: 118 RALADLAETREYRPR---LLAVTGTNGKTTVTALTRDLIDASGLSVVAAGNISPAALTAL 174
Query: 87 FHCI---ALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYA 143
+ ALP QV V+E+SS+Q+E + +VVLN+T DHL+ H M+ YA
Sbjct: 175 IDALDNDALP------QVWVLELSSFQLET-TRSLMADAAVVLNVTQDHLDWHGGMEAYA 227
Query: 144 LTKCHLFS---------------HMVNT--KLGLLPFGNQHLNEAIKGHRFNL----AWI 182
K L MV T L + FG + + E + L AW+
Sbjct: 228 EAKARLLKMARIAIVNRDDPLTVRMVQTVNALNVRSFG-RDMPELVGDMGLELGQGVAWL 286
Query: 183 GAFPGVKIDTEA------KTASFEVPAVGVVSQLQ-LHNMKVMGRHNYHNAAVAALSVLG 235
A V D A K A V A G +S+L + +++ G HN NA A
Sbjct: 287 VAAEPVDFDEPAPPVRRKKDAPEPVRANGRMSRLMPVDALRIRGIHNALNALAALQLARC 346
Query: 236 LDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKC 295
LD+G A+ T+ PHR V R I GV +++DSK TN+ AT L L G
Sbjct: 347 LDLGWG--AMLRTLREYAGEPHRAAFV-RQIGGVDYINDSKGTNVGATVAALEGL-GQPV 402
Query: 296 VILLGGQAKVLNGQESNGFEKLIEPLNHH 324
V++ GGQ K GQ+ F LI ++ H
Sbjct: 403 VLIAGGQGK---GQD---FSPLIPVVSRH 425
>gi|237709499|ref|ZP_04539980.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides sp.
9_1_42FAA]
gi|265754705|ref|ZP_06089757.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides sp.
3_1_33FAA]
gi|423230229|ref|ZP_17216633.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides dorei
CL02T00C15]
gi|423241043|ref|ZP_17222157.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides dorei
CL03T12C01]
gi|423243941|ref|ZP_17225016.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides dorei
CL02T12C06]
gi|229456555|gb|EEO62276.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides sp.
9_1_42FAA]
gi|263234819|gb|EEZ20387.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides sp.
3_1_33FAA]
gi|392631738|gb|EIY25707.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides dorei
CL02T00C15]
gi|392643105|gb|EIY36863.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides dorei
CL03T12C01]
gi|392643459|gb|EIY37209.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides dorei
CL02T12C06]
Length = 444
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 148/306 (48%), Gaps = 30/306 (9%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
L G ++SE++FA + + K++ +TG+NGK+T + + + G+ + GN+G
Sbjct: 83 LKAQGTPIISEIEFAGRYT--NAKMICITGSNGKTTTTSLIYHIFKKAGMNVGLAGNIGQ 140
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDHLERHK-T 138
L A ++ + V+E+SS+Q++ N Y F ++V++N+TPDHL+R+
Sbjct: 141 SL--------AYQVAEYNYDYYVIELSSFQLD--NMYKFHANIAVLMNITPDHLDRYDHQ 190
Query: 139 MKNYALTKCHLFSHMVNTKLGLL----PFGNQHLNE-AIKGHRFNLAWIGAFPGVKIDTE 193
M+NY K + + + P + L++ I GH + A G E
Sbjct: 191 MQNYVDAKFRIIQNQTPDDAFIFWNDDPIIQRELHKYGIHGHYYPFAERKE-EGTAAYVE 249
Query: 194 AKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILR 253
F P + ++ + + G HN N+ A +S L G+ E + + +
Sbjct: 250 QDKVYFTEP---IAFNMEQEELALTGTHNLFNSMAAGISA-NL-AGIRKECIREALGDFK 304
Query: 254 TPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNG 313
HR++ V R ++GV +++DSKATN+ + L +K K +++LGG+ K G + N
Sbjct: 305 GVEHRLEKVCR-VRGVDYINDSKATNVNSCWYALQSMKT-KTILILGGKDK---GNDYNE 359
Query: 314 FEKLIE 319
L++
Sbjct: 360 IADLVK 365
>gi|421539623|ref|ZP_15985782.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis 93004]
gi|402321117|gb|EJU56596.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis 93004]
Length = 445
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 144/293 (49%), Gaps = 38/293 (12%)
Query: 23 QSGKRVMSELDFAAQVI-PRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
Q+G RV+ +++ A ++ R K++A+TG+NGK+TV + VG + G++ + GN+G P
Sbjct: 89 QNGGRVLGDIELLADIVNRRGDKVIAITGSNGKTTVTSLVGYLCIKCGLDTVIAGNIGTP 148
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
+ EA + K V V+E+SS+Q+E + PT + VLN++ DHL+R+ + +
Sbjct: 149 VLEAEWQ-----REGKKADVWVLELSSFQLE-NTESLRPTAATVLNISEDHLDRYDDLLD 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHR----FNLA-----WIGAFPG-VKID 191
YA TK +F + +L + + R F+L W+ G +K
Sbjct: 203 YAHTKAKIFR---GNGVQVLNADDAFCRAMKRAGREVKWFSLEHEADFWLARETGRLKQG 259
Query: 192 TEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEI 251
E A+ ++P G+ ++ A V A L IG+ L ++
Sbjct: 260 NEDLIATQDIPLQGL----------------HNAANVMAAVALCEAIGLSRNELLEHVKT 303
Query: 252 LRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
+ PHR++ + + GV ++DDSK TN+ AT + L+ + ++LGG K
Sbjct: 304 FQGLPHRVEKIG-EKNGVVFIDDSKGTNVGATAAAIAGLQ-NPLFVILGGMGK 354
>gi|342163377|ref|YP_004768016.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
pseudopneumoniae IS7493]
gi|341933259|gb|AEL10156.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
pseudopneumoniae IS7493]
Length = 450
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 147/301 (48%), Gaps = 31/301 (10%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L G V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LAKGIPVLTEVELAYLI--SEAPIIGITGSNGKTTTTTMIGEVLTAAGQHGLLSGNIGYP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A + V+E+SS+Q+ + + F P ++V+ NL P H++ H + +
Sbjct: 151 ASQVA-------QTATDEDTLVMELSSFQL-MGVQEFHPEIAVITNLMPTHIDYHGSFEE 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGV-KIDT---EAKTA 197
Y K ++ + M +L F NQ L + + R A + F + K+D E
Sbjct: 203 YVAAKWNIQNKMTAADFLVLNF-NQDLAKELA--RKTQATVVPFSTLEKVDGAYLEDGQL 259
Query: 198 SFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPH 257
F V S++ V G HN N A+A ++V L GVD + + T+ H
Sbjct: 260 YFRGEVVMAASEI-----GVPGNHNVEN-ALATIAVAKLR-GVDNQTIKETLSAFGGVKH 312
Query: 258 RMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKL 317
R+Q V+ +I+GV + +DSK+TN+ AT L K +++ GG + N F++L
Sbjct: 313 RLQFVN-EIKGVKFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------GNEFDEL 365
Query: 318 I 318
+
Sbjct: 366 V 366
>gi|254446684|ref|ZP_05060159.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Verrucomicrobiae
bacterium DG1235]
gi|198256109|gb|EDY80418.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Verrucomicrobiae
bacterium DG1235]
Length = 429
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/281 (31%), Positives = 137/281 (48%), Gaps = 42/281 (14%)
Query: 25 GKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSE 84
G V+ ELD A + I+ +TGTNGK+T+ F+ + GIEA+ GN+G P+S
Sbjct: 89 GCEVVPELDLGASLWRG--PIVVITGTNGKTTLTEFITSAFSSAGIEAYACGNIGRPISS 146
Query: 85 AAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYAL 144
L + +AV EVSS+Q EI + ++ + N DHL+RHK++++Y
Sbjct: 147 LVADDCNLEA------IAVCEVSSFQAEITKRLHADSL-LWTNFDEDHLDRHKSLESY-- 197
Query: 145 TKCHLFSHMVNTKLGLLPFGNQHL-NEAIK--GHRFNLAWIGAFPGVKIDTEAKTASFEV 201
KC L L G+ L +E++K G RFN A P D +S +
Sbjct: 198 FKCKY-------TLTQLQRGDVFLFDESVKEFGERFNY----AIP----DEGLIDSSLDA 242
Query: 202 PAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQ- 260
+GV + + + N + A A +GLD G +EA N+ + PHRM+
Sbjct: 243 LELGVAGTV----FETLPERNTYLIARALWLRMGLDEGELIEAANN----FKKSPHRMEL 294
Query: 261 IVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGG 301
IV++D G+++ DDSK+TN A L + V+ +GG
Sbjct: 295 IVNQD--GISYWDDSKSTNFHAVYGALKRFE--NPVVWIGG 331
>gi|387783861|ref|YP_006069944.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
salivarius JIM8777]
gi|338744743|emb|CCB95109.1| uDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
salivarius JIM8777]
Length = 450
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/308 (30%), Positives = 144/308 (46%), Gaps = 37/308 (12%)
Query: 18 LACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGN 77
+A L+ G V +E++ A V I+ +TG+NGK+T T + +LNH G + GN
Sbjct: 89 VARALEKGIPVWTEVELAYLV--SEAPIIGITGSNGKTTTTTMIADVLNHGGKSGVLSGN 146
Query: 78 LGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK 137
+G P SE A A + V+E+SS+Q+ + F P ++V+ NL P H++ H
Sbjct: 147 IGFPASEVAQSVTAQDT-------LVMELSSFQL-MGIDSFHPHIAVITNLMPTHIDYHG 198
Query: 138 TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGV-KIDTEAKT 196
T + Y K ++ + M +L F NQ L + + A + F V K+D
Sbjct: 199 TFEEYVAAKWNIQNQMTADDFVVLNF-NQDLAKELATQ--TKAQVVPFSTVEKVD----G 251
Query: 197 ASFEVPAVGVVSQL--QLHNMKVMGRHNYHNA----AVAALSVLGLDIGVDVEALNSTIE 250
A E + +L Q + V G HN NA AVA LS G+ +A+ T+
Sbjct: 252 AYLENGGLYFKGELVMQADEIGVPGSHNVENALATIAVAKLS------GISNQAIKETLA 305
Query: 251 ILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQE 310
HR+Q V I V + +DSK+TN+ AT L K +++ GG +
Sbjct: 306 SFGGVKHRLQFVDT-IDEVRFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------ 358
Query: 311 SNGFEKLI 318
N F++LI
Sbjct: 359 GNEFDELI 366
>gi|225856379|ref|YP_002737890.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
pneumoniae P1031]
gi|225858514|ref|YP_002740024.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
pneumoniae 70585]
gi|387626084|ref|YP_006062256.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae INV104]
gi|417693620|ref|ZP_12342809.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA47901]
gi|444381759|ref|ZP_21179965.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
pneumoniae PCS8106]
gi|444385444|ref|ZP_21183517.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
pneumoniae PCS8203]
gi|444409214|ref|ZP_21205811.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
pneumoniae PNI0076]
gi|444411969|ref|ZP_21208295.1| putative UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
[Streptococcus pneumoniae PNI0153]
gi|444422074|ref|ZP_21217738.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
pneumoniae PNI0446]
gi|254766057|sp|C1C648.1|MURD_STRP7 RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|254766061|sp|C1CJF2.1|MURD_STRZP RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|225722058|gb|ACO17912.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae 70585]
gi|225725603|gb|ACO21455.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae P1031]
gi|301793866|emb|CBW36259.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae INV104]
gi|332204703|gb|EGJ18768.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA47901]
gi|444250046|gb|ELU56530.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
pneumoniae PCS8203]
gi|444254011|gb|ELU60458.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
pneumoniae PCS8106]
gi|444275301|gb|ELU80928.1| putative UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
[Streptococcus pneumoniae PNI0153]
gi|444279948|gb|ELU85328.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
pneumoniae PNI0076]
gi|444288570|gb|ELU93462.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
pneumoniae PNI0446]
Length = 450
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 146/297 (49%), Gaps = 23/297 (7%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L G V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LAKGIPVLTEVELAYLI--SEAPIIGITGSNGKTTTTTMIGEVLTAAGQHGLLSGNIGYP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A + S K V+E+SS+Q+ + + F P ++V+ NL P H++ H +
Sbjct: 151 ASQVA----QIASDKDTL---VMELSSFQL-MGVQEFHPEIAVITNLMPTHIDYHGSFSE 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEV 201
Y K ++ + M +L F NQ L + + A + F ++ A ++
Sbjct: 203 YVAAKWNIQNKMTAADFLVLNF-NQDLAKDLTSK--TEATVVPFSTLEKVDGAYLEDGQL 259
Query: 202 PAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQI 261
G V + + + V G HN N A+A ++V L GVD + + T+ HR+Q
Sbjct: 260 YFRGEVV-MAANEIGVPGSHNVEN-ALATIAVAKLR-GVDNQTIKETLSAFGGVKHRLQF 316
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
V DI+GV + +DSK+TN+ AT L K V++ GG + N F++L+
Sbjct: 317 VD-DIKGVKFYNDSKSTNILATQKALSGFDNSKVVLIAGGLDR------GNEFDELV 366
>gi|190570951|ref|YP_001975309.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Wolbachia
endosymbiont of Culex quinquefasciatus Pel]
gi|190357223|emb|CAQ54641.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Wolbachia
endosymbiont of Culex quinquefasciatus Pel]
Length = 451
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 142/283 (50%), Gaps = 34/283 (12%)
Query: 27 RVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAA 86
++ S+++ + + K++ +TGTNGKST + +G +L G + +GGNLG P+ +
Sbjct: 101 KIKSDIELFLETKTTNQKVIGITGTNGKSTTTSLIGHILKSTGKKVAIGGNLGMPILDL- 159
Query: 87 FHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTK 146
+ ++ V+E SS+Q+E+ N+ +SV+LN+TPDH++RH +M NY TK
Sbjct: 160 ---------ERDAEIYVIEFSSFQLELMNE-INVDISVLLNITPDHIDRHGSMNNYIATK 209
Query: 147 CHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGV 206
L + +K+ ++ N+ I FN F G KI A +
Sbjct: 210 LKLIN---GSKIAVIGCDNK-----ITSDVFN-----KFTGNKIPISASMSPSLSSQCLG 256
Query: 207 VSQLQLHNMKVMGRH-----NYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQI 261
+L+ H++ V N N VAA +V L +GVD + + I+ HR +
Sbjct: 257 TGKLENHSLSVSDVKINLVSNVEN-IVAAHAVCKL-LGVDSSTIVNEIKSFPGLRHRNEF 314
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
+ + I V +++DSKATN E+T ++ K ++GG++K
Sbjct: 315 LGK-IHNVLFINDSKATNAESTEKAILSYKN--IYWIVGGKSK 354
>gi|124026491|ref|YP_001015606.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
[Prochlorococcus marinus str. NATL1A]
gi|123961559|gb|ABM76342.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Prochlorococcus
marinus str. NATL1A]
Length = 469
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 142/286 (49%), Gaps = 28/286 (9%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V E++ A + + I + +TGTNGK+TV + +L + +GGN+G LS+ A
Sbjct: 104 VQGEVELAWERLTH-IPSIGITGTNGKTTVTNMLNHILKLNNLNTDMGGNIGKALSKIAL 162
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
+ ++ + V+E+SS+Q+E K PT+ + TPDHLERH +++Y K
Sbjct: 163 E--NMKNNNQELNWLVLELSSFQIEGSPK-VAPTIGIWTTFTPDHLERHNDIESYFKIKR 219
Query: 148 HLFS----HMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPA 203
L + N+ L + L + I W+G + ++ F +
Sbjct: 220 SLLEKSSIRIYNSDDQFLSSKRKELPKGI--------WVGT---NQQSFYSEYQKFWIDQ 268
Query: 204 VGVV--SQLQLHN---MKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHR 258
G + + QL + +K+ G+HN N + + +IG+D ++ +I+ R+ PHR
Sbjct: 269 KGYIFEDKKQLFHSSILKIPGKHNLQNLLLVIAA--AREIGLDDSSIAKSIKSFRSIPHR 326
Query: 259 MQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
++ + + I +++ +DSKATN +++ TGL + H ++L GG K
Sbjct: 327 LEYLGK-INNLSFYNDSKATNFDSSITGLKSVP-HPIILLAGGIQK 370
>gi|255527653|ref|ZP_05394513.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Clostridium
carboxidivorans P7]
gi|296186918|ref|ZP_06855319.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Clostridium
carboxidivorans P7]
gi|255508666|gb|EET85046.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Clostridium
carboxidivorans P7]
gi|296048632|gb|EFG88065.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Clostridium
carboxidivorans P7]
Length = 458
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 138/282 (48%), Gaps = 26/282 (9%)
Query: 23 QSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPL 82
+ G + SE++ + P K+ VTG++GK+T T + +L G + +VGGN+G PL
Sbjct: 99 KQGAYITSEMEEFIKYCP--AKVYGVTGSDGKTTTTTLIYNILKQQGYKTWVGGNIGTPL 156
Query: 83 SEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNY 142
F I S K V+E+SS+Q+ N P V+VV NL+P+HL+ HK M+ Y
Sbjct: 157 ----FTEIEKMKSDDK---VVLELSSFQLMTMN--VSPEVAVVTNLSPNHLDIHKDMQEY 207
Query: 143 ALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKT-ASFEV 201
+K ++F + + L +L N N FN A G I + K A FE
Sbjct: 208 IDSKKNIFKYQQSESLLILNRDNNLTN-----SMFNEAK-GRVLEFSIKEKVKDGAYFEE 261
Query: 202 PAVGVVSQ--LQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRM 259
+ + + +L+ +++ G HN N +AA + D V++E + T HR
Sbjct: 262 NKLYIKEKEVCKLNEIQIKGMHNVENL-LAAFCAVSDD--VNIENMRKTAISFTGVEHRC 318
Query: 260 QIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGG 301
+ + R+I GV + +DS AT+ T GL K VIL+ G
Sbjct: 319 EFI-REIDGVKYYNDSIATSPSRTLAGLKAF--EKPVILIAG 357
>gi|254805548|ref|YP_003083769.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Neisseria
meningitidis alpha14]
gi|254669090|emb|CBA07647.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis alpha14]
Length = 445
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 144/293 (49%), Gaps = 38/293 (12%)
Query: 23 QSGKRVMSELDFAAQVI-PRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
Q+G RV+ +++ A ++ R K++A+TG+NGK+TV + VG + G++ + GN+G P
Sbjct: 89 QNGGRVLGDIELLADIVNRRGDKVIAITGSNGKTTVTSLVGYLCIKCGLDTVIAGNIGTP 148
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
+ EA + K V V+E+SS+Q+E + PT + VLN++ DHL+R+ + +
Sbjct: 149 VLEAEWQ-----REGKKADVWVLELSSFQLE-NTESLRPTAATVLNISEDHLDRYDDLLD 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHR----FNLA-----WIGAFPG-VKID 191
YA TK +F + +L + + R F+L W+ G +K
Sbjct: 203 YAHTKAKIFR---GDGVQVLNADDAFCRAMKRAGREVKWFSLEHEADFWLARETGRLKQG 259
Query: 192 TEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEI 251
E A+ ++P G+ ++ A V A L IG+ L ++
Sbjct: 260 NEDLIATQDIPLQGL----------------HNAANVMAAVALCEAIGLSRNELLEHVKT 303
Query: 252 LRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
+ PHR++ + + GV ++DDSK TN+ AT + L+ + ++LGG K
Sbjct: 304 FQGLPHRVEKIG-EKNGVVFIDDSKGTNVGATAAAIAGLQ-NPLFVILGGMGK 354
>gi|148997231|ref|ZP_01824885.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
pneumoniae SP11-BS70]
gi|168575358|ref|ZP_02721294.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae MLV-016]
gi|307067304|ref|YP_003876270.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Streptococcus
pneumoniae AP200]
gi|419470663|ref|ZP_14010522.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA07914]
gi|419492830|ref|ZP_14032557.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA47210]
gi|419503514|ref|ZP_14043185.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA47760]
gi|421238336|ref|ZP_15694905.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae 2071247]
gi|421244529|ref|ZP_15701032.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae 2081685]
gi|421313875|ref|ZP_15764465.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA47562]
gi|147756931|gb|EDK63971.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
pneumoniae SP11-BS70]
gi|183578542|gb|EDT99070.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae MLV-016]
gi|306408841|gb|ADM84268.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Streptococcus
pneumoniae AP200]
gi|379545379|gb|EHZ10518.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA07914]
gi|379594868|gb|EHZ59677.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA47210]
gi|379609112|gb|EHZ73853.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA47760]
gi|395602923|gb|EJG63064.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae 2071247]
gi|395610187|gb|EJG70266.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae 2081685]
gi|395914375|gb|EJH25219.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA47562]
Length = 450
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 146/297 (49%), Gaps = 23/297 (7%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L G V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LAKGIPVLTEVELAYLI--SEAPIIGITGSNGKTTTTTMIGEVLTAAGEHGLLSGNIGYP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A + S K V+E+SS+Q+ + + F P ++V+ NL P H++ H +
Sbjct: 151 ASQVA----QIASDKDTL---VMELSSFQL-MGVQEFHPEIAVITNLMPTHIDYHGSFSE 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEV 201
Y K ++ + M +L F NQ L + + A + F ++ A ++
Sbjct: 203 YVAAKWNIQNKMTAADFLVLNF-NQDLAKDLASK--TEATVVPFSTLEKVDGAYLEDGQL 259
Query: 202 PAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQI 261
G V + + + V G HN N A+A ++V L GVD + + T+ HR+Q
Sbjct: 260 YFRGEVV-MAANEIGVPGSHNVEN-ALATIAVAKLR-GVDNQTIKETLSAFGGVKHRLQF 316
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
V DI+GV + +DSK+TN+ AT L K V++ GG + N F++L+
Sbjct: 317 VD-DIKGVKFYNDSKSTNILATQKALSGFDNSKVVLIAGGLDR------GNEFDELV 366
>gi|300173574|ref|YP_003772740.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Leuconostoc
gasicomitatum LMG 18811]
gi|333447883|ref|ZP_08482825.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Leuconostoc inhae
KCTC 3774]
gi|299887953|emb|CBL91921.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Leuconostoc
gasicomitatum LMG 18811]
Length = 448
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 143/289 (49%), Gaps = 30/289 (10%)
Query: 44 KILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAV 103
+++AVTG+NGK+T + + ML G + GN+G P+ E A + +
Sbjct: 111 RLIAVTGSNGKTTTTSLIRDMLKSDGQKVTTAGNIGIPVCEVIKDLTADDT-------LL 163
Query: 104 VEVSSYQ-MEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLP 162
+E+SS+Q M P+ P ++++ N+ +HL+ H T +NY K L + + +L +L
Sbjct: 164 LELSSFQLMGTPD--IRPDIALITNIFANHLDYHGTRENYVAAKFQLTKNQTSNQLLVLN 221
Query: 163 FGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQ---LQLHNMKVMG 219
Q +E IK A + AF +K D +T + ++ ++S + L +K++G
Sbjct: 222 ADGQDTDEFIKKTH---AKVVAFSRIKNDYTVRTDNVDL----IISDNHLMPLSGIKLVG 274
Query: 220 RHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATN 279
HN N VAA++V L GV A+ +E HR+Q V D GV + +DSKAT+
Sbjct: 275 PHNLEN-IVAAVTVAKL-AGVHDTAIRHVLETFGGVEHRLQHVLTD-NGVVFYNDSKATD 331
Query: 280 LEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPLNHHRCVI 328
+EAT T L H+ I L G + +L+ L+H + VI
Sbjct: 332 IEATQTALNSF--HQPTIWLAGGL-----DRGDDLMRLLPNLSHVKAVI 373
>gi|28897232|ref|NP_796837.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Vibrio
parahaemolyticus RIMD 2210633]
gi|153839040|ref|ZP_01991707.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio
parahaemolyticus AQ3810]
gi|260366058|ref|ZP_05778524.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Vibrio
parahaemolyticus K5030]
gi|260878313|ref|ZP_05890668.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Vibrio
parahaemolyticus AN-5034]
gi|260896402|ref|ZP_05904898.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Vibrio
parahaemolyticus Peru-466]
gi|433656751|ref|YP_007274130.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio
parahaemolyticus BB22OP]
gi|33301382|sp|Q87SG6.1|MURD_VIBPA RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|28805441|dbj|BAC58721.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Vibrio
parahaemolyticus RIMD 2210633]
gi|149747468|gb|EDM58416.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio
parahaemolyticus AQ3810]
gi|308087563|gb|EFO37258.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Vibrio
parahaemolyticus Peru-466]
gi|308093171|gb|EFO42866.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Vibrio
parahaemolyticus AN-5034]
gi|308111373|gb|EFO48913.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Vibrio
parahaemolyticus K5030]
gi|432507439|gb|AGB08956.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio
parahaemolyticus BB22OP]
Length = 437
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 148/320 (46%), Gaps = 47/320 (14%)
Query: 18 LACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGN 77
+ +L G V+ +++ A + + + +A+TG+NGKSTV G M G+ VGGN
Sbjct: 85 IQTVLAKGTPVVGDIELFAWAVNKPV--VAITGSNGKSTVTDLTGVMAKAAGLTVGVGGN 142
Query: 78 LGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK 137
+G P AL + + V+E+SS+Q+E + + LNL+ DH++R++
Sbjct: 143 IGVP---------ALELLEQDADLYVLELSSFQLETTSSLKL-KAAAFLNLSEDHMDRYE 192
Query: 138 TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTA 197
M +Y K +F H +L ++ +Q ++ P V ++ +
Sbjct: 193 GMADYRAAKLRIFDH---AELAVVNRDDQETYPEVE-----------MPVVTFGSDEQAY 238
Query: 198 SFEVPAVGVVSQLQLH--------NMKVMGRHNYHNAAV--AALSVLGLDIGVDVEALNS 247
EV G + L H +K++G+HN NA V A L G+D + AL +
Sbjct: 239 GLEVD--GSRTWLLDHGQRVIASDELKLVGKHNLANALVVLALLKAAGVDYHNALNALKN 296
Query: 248 TIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGH-KCVILLGGQAKVL 306
+ HR Q+V D +GV WV+DSKATN+ +T L L+ K +L+GG K
Sbjct: 297 YTGL----THRCQVV-ADNRGVKWVNDSKATNIASTMAALSGLESTGKLYLLVGGVGK-- 349
Query: 307 NGQESNGFEKLIEPLNHHRC 326
G + + + LN C
Sbjct: 350 -GADFTPLKPIFATLNLQLC 368
>gi|444380297|ref|ZP_21179436.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Enterovibrio sp.
AK16]
gi|443675566|gb|ELT82289.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Enterovibrio sp.
AK16]
Length = 450
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/274 (32%), Positives = 133/274 (48%), Gaps = 26/274 (9%)
Query: 37 QVIPRSIK--ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPS 94
++ R +K ++ +TG+NGKSTV + VG+M GI VGGN+G AA +A
Sbjct: 99 ELFARDVKAPVIGITGSNGKSTVTSLVGEMAKAAGINVGVGGNIGF----AALDMLA--- 151
Query: 95 SKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMV 154
+ ++ V+E+SS+Q+E + +V LNL+ DH++R++ M +Y K +F
Sbjct: 152 --NEHELYVLELSSFQLETTSSLNLE-AAVFLNLSEDHMDRYEGMDDYRDAKLRIFDQ-- 206
Query: 155 NTKLGLLPFGN-QHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLH 213
TKL + + Q N KG G G TE A + V + +
Sbjct: 207 -TKLSVWNQDDLQTKNTQTKGDNVPAISFGFTSGEYTLTEKDGAEWLTAKGEPV--MAVS 263
Query: 214 NMKVMGRHNYHN--AAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTW 271
++ ++GRHN N AA+A +GV EA + R PHR Q V GV W
Sbjct: 264 DIALVGRHNVANCLAAMAQADA----VGVSREAQCQAMREYRGLPHRCQQVIEH-NGVLW 318
Query: 272 VDDSKATNLEATCTGLMDLK-GHKCVILLGGQAK 304
V+DSKATN +T L L+ + +L+GG K
Sbjct: 319 VNDSKATNPASTEAALDGLQLAGRLHLLVGGDGK 352
>gi|126172652|ref|YP_001048801.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Shewanella
baltica OS155]
gi|386339427|ref|YP_006035793.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Shewanella baltica
OS117]
gi|125995857|gb|ABN59932.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Shewanella baltica
OS155]
gi|334861828|gb|AEH12299.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Shewanella baltica
OS117]
Length = 439
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 139/291 (47%), Gaps = 41/291 (14%)
Query: 25 GKRVMSELD-FAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLS 83
G V+ +++ FA ++ R ++ +TG+NGKSTV T VG+M GI VGGN+G P
Sbjct: 90 GIEVIGDVELFAREIADRKPCVIGITGSNGKSTVTTLVGEMAREAGIAVAVGGNIGVP-- 147
Query: 84 EAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYA 143
AL + V+E+SS+Q+E + C V+ LN++ DH++R+ + Y
Sbjct: 148 -------ALDLLHENADLFVLELSSFQLETTHSLKC-VVATCLNISEDHMDRYSDIAAYR 199
Query: 144 LTKCHLF--SHMV----NTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTA 197
K L+ S V + KL + P E + + F LA D++
Sbjct: 200 EAKLRLYKQSRAVLFNRDDKLTVPP-------EPMNQNSFGLAAPETDEWGISDSKIYHG 252
Query: 198 SFEVPAVGVVSQLQLHNMKVMGRHNYHN--AAVAALSVLGLDIGVDVEALNSTIEILRTP 255
S E+ + + + ++G HN+ N AA+A + V +GVD + +
Sbjct: 253 SSEI--------MPITEVSLIGSHNHANLLAAMALVDV----VGVDKQVMAKVARSFTGL 300
Query: 256 PHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGH--KCVILLGGQAK 304
HR ++V GVT+V+DSKATN+ AT L L H +++ GG K
Sbjct: 301 SHRCEVVGIK-NGVTYVNDSKATNVGATVAALDGLSDHLGDIILIAGGDGK 350
>gi|168482914|ref|ZP_02707866.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae CDC1873-00]
gi|418161724|ref|ZP_12798415.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA17328]
gi|418175491|ref|ZP_12812089.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA41437]
gi|418218425|ref|ZP_12845093.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae NP127]
gi|418238261|ref|ZP_12864817.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae NorthCarolina6A-23]
gi|419459536|ref|ZP_13999472.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA02270]
gi|419461816|ref|ZP_14001732.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA02714]
gi|172043724|gb|EDT51770.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae CDC1873-00]
gi|353831314|gb|EHE11443.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA17328]
gi|353844051|gb|EHE24095.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA41437]
gi|353876622|gb|EHE56471.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae NP127]
gi|353894684|gb|EHE74425.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae NorthCarolina6A-23]
gi|379534408|gb|EHY99620.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA02270]
gi|379534707|gb|EHY99917.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA02714]
Length = 450
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 148/297 (49%), Gaps = 23/297 (7%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L G V++E++ A +I ++ I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LAKGIPVLTEVELA-YLISEAL-IIGITGSNGKTTTTTMIGEVLTAAGQHGLLSGNIGYP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A + S K V+E+SS+Q+ + + F P ++V+ NL P H++ H
Sbjct: 151 ASQVA----QIASDKDTL---VMELSSFQL-MGVQEFHPEIAVITNLMPTHIDYHGAFSE 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEV 201
Y K ++ + M +L F NQ L + + A + F ++ A ++
Sbjct: 203 YVAAKWNIQNKMTAADFLVLNF-NQDLAKDLASK--TEATVVPFSTLEKVDGAYLEDGQL 259
Query: 202 PAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQI 261
G V + + + V G HN N A+A ++V L GVD + + T+ HR+Q
Sbjct: 260 YFRGEVV-MAANEIGVPGSHNVEN-ALATIAVAKLR-GVDNQTIKETLSAFGGVKHRLQF 316
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
V DI+GV + +DSK+TN+ AT L K V++ GG + N F++L+
Sbjct: 317 VD-DIKGVKFYNDSKSTNILATQKALSGFDNSKVVLIAGGLDR------GNEFDELV 366
>gi|62900655|sp|Q5E2P8.2|MURD_VIBF1 RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
Length = 440
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 148/294 (50%), Gaps = 44/294 (14%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
+ G +++ +++ A + + ++A+TG+NGKSTV G+M G++ VGGN+G
Sbjct: 89 IDKGIKIVGDIELFAWAV--NAPVIAITGSNGKSTVTDLTGEMAKAAGVKTAVGGNIG-- 144
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
AL + ++ V+E+SS+Q+E + + LNL+ DH++R++ M +
Sbjct: 145 -------FAALDLLEQDAELYVLELSSFQLETTSTLKLK-AAAFLNLSEDHMDRYQGMAD 196
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQH----LNEAIKGHRFNLAWIGAFPGVKIDTEAKTA 197
Y K +F H ++ ++ ++ + + +K F+ G I+ AK
Sbjct: 197 YRQAKLRIFEH---AEVCIVNRDDKQTYPDVEKTLKSFGFDQGDYGCIEKDGIEYLAKN- 252
Query: 198 SFEVPAVGVVSQLQLHNMKVMGRHNYHNA--AVAALSVLGLDIGVDVEALNSTIEILRTP 255
V L + + ++G+HN N+ A+A L G++ L++T++ LRT
Sbjct: 253 --------TVPLLAANELGLVGKHNIANSLVAIALLDAAGIN-------LDATLDTLRTY 297
Query: 256 ---PHRMQIVHRDIQGVTWVDDSKATNLEATCTGL--MDLKGHKCVILLGGQAK 304
HR Q+V D G+ WV+DSKATN+ +T L + L+G K +L+GG K
Sbjct: 298 NGLTHRCQVV-ADNNGIRWVNDSKATNVASTLAALSGLQLEG-KLHLLVGGVGK 349
>gi|402846605|ref|ZP_10894916.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Porphyromonas
sp. oral taxon 279 str. F0450]
gi|402267821|gb|EJU17212.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Porphyromonas
sp. oral taxon 279 str. F0450]
Length = 481
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 151/307 (49%), Gaps = 41/307 (13%)
Query: 14 KATGLACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAF 73
KA + + + G V+SE++ A + + K++ +TG+NGK+T ++ +L G++
Sbjct: 101 KAPIMVAIRERGIPVISEIELAGRYL--KGKVIGITGSNGKTTTTMWLHHILTEAGMKPA 158
Query: 74 VGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHL 133
+ GN+G L+ +P +P + VVE+SS+Q++ K F +++++N+TPDHL
Sbjct: 159 LAGNVGFSLARQ-----VIPDEQPDY--FVVELSSFQLDDMYK-FRVHIALLMNITPDHL 210
Query: 134 ER-HKTMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHR---------FNLAWIG 183
+R H + YA+ K + + + ++ ++ + H+ +G
Sbjct: 211 DRYHYNFEEYAMAKMRILQNQTAEDAFIYWGEDEFVSRYVMSHQPMPMQTLSFLTYPQVG 270
Query: 184 AFPGVKIDTEAKT----ASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIG 239
+ D + SFE P + QL L G HN NA A+++ L L +
Sbjct: 271 SAADKSDDNMMRLHFDGKSFEFP----IDQLALQ-----GPHNLQNAMAASIAALRLGVS 321
Query: 240 VDV--EALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVI 297
DV AL+ + + PHR++ V + GV +++DSKATN+ +T L + V+
Sbjct: 322 HDVLRRALSDFVNV----PHRLEKVGV-LDGVRYINDSKATNVSSTYYALRTMTT-PYVL 375
Query: 298 LLGGQAK 304
+LGG+ K
Sbjct: 376 ILGGEDK 382
>gi|450005148|ref|ZP_21826532.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans NMT4863]
gi|449189012|gb|EMB90696.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans NMT4863]
Length = 451
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 149/294 (50%), Gaps = 29/294 (9%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V++E++ A + I+ +TG+NGK+T T + +LNH G A + GN+G P SE
Sbjct: 99 VITEVELAYLI--SEAPIIGITGSNGKTTTTTMIADVLNHAGQSARLSGNIGFPASE--- 153
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
+A P ++ + V+E+SS+Q+ + + F P ++V+ NL P H++ H + +NY K
Sbjct: 154 --VAQPVTEK--DILVMELSSFQL-MGTESFHPHMAVITNLMPTHIDYHGSFENYIEAKW 208
Query: 148 HLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKID---TEAKTASFEVPAV 204
+ +M +L F NQ L + + ++ I K+D + + F+ A+
Sbjct: 209 SIQKNMTEKDFLVLNF-NQDLAKDL-ANQTQAKIIPFSTKEKVDGAYLDGQMLCFKGQAI 266
Query: 205 GVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHR 264
S+L V G HN N A+A ++V L GV EA+ T+ HR+Q +
Sbjct: 267 MSASEL-----GVPGSHNVEN-ALATIAVAKLS-GVSNEAIRETLIHFGGVKHRLQSLG- 318
Query: 265 DIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
+I GV + +DSK+TN+ AT L K +++ GG + N F++L+
Sbjct: 319 NIAGVKFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------GNEFDELV 366
>gi|345017940|ref|YP_004820293.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Thermoanaerobacter
wiegelii Rt8.B1]
gi|344033283|gb|AEM79009.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Thermoanaerobacter
wiegelii Rt8.B1]
Length = 454
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 153/301 (50%), Gaps = 31/301 (10%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V+ E++FA + I A+TGTNGK+T + +G+M + G + +V GN+G PL A
Sbjct: 95 VLGEVEFAYRF--SKAPIYAITGTNGKTTTTSLLGEMFKNAGRKVYVAGNIGYPLIYA-- 150
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
+ +++ F VA E+SS+Q+E K F P +S ++N+TPDHL RHKT ++Y K
Sbjct: 151 ---VMEATEGDFIVA--EISSFQLETI-KEFKPKISCIINITPDHLNRHKTFESYRDIKG 204
Query: 148 HLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDT-----EAKTASFEVP 202
+F + + +L F ++ + N A FP + + K S +
Sbjct: 205 RIFENQRGDEYTVLNF-----DDPVTWSLKNKAKCRVFPFSRKSSLENGAYVKDGSIYIS 259
Query: 203 AVGVVSQ-LQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQI 261
G + + + + + G HN N A+AA SV L G+ + +T++ + HR++
Sbjct: 260 VNGNAKKIIDIEEIYIPGEHNLEN-ALAASSVAYLS-GISANVIANTLKTFKGVEHRIEF 317
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPL 321
V +I GV + +DSK TN +A+ + LK V++ GG K G E F++ ++
Sbjct: 318 VD-EINGVKFYNDSKGTNPDASIKAIQALK-TPIVLIAGGYDK---GSE---FDEFVKAF 369
Query: 322 N 322
N
Sbjct: 370 N 370
>gi|303327350|ref|ZP_07357791.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Desulfovibrio
sp. 3_1_syn3]
gi|302862290|gb|EFL85223.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Desulfovibrio
sp. 3_1_syn3]
Length = 434
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 129/285 (45%), Gaps = 54/285 (18%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V++E++ A + + +LAVTGT+GK+T + ML G F+GGN+G PLSE
Sbjct: 105 VLAEMELAWRYLDDE-PVLAVTGTSGKTTTASLAAAMLQAQGYTVFLGGNIGTPLSEYVL 163
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
S K V V+E+SS+Q++ + FCP V+LN+TP+HL+ HK M Y K
Sbjct: 164 -------SGRKADVLVLEISSFQLQACST-FCPRAGVLLNITPNHLDYHKDMAEYTEAKF 215
Query: 148 HLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNL----AWIGAFPGVKIDTEAKTASFEVPA 203
LF L +L L++ +G FNL W+ AS P
Sbjct: 216 RLFRCQDEGDLAVL---GADLHDPAQG--FNLRARRVWV-------------RASERFPQ 257
Query: 204 VGVVSQLQLHNMKVMGRHNYHN--AAVAALSVLGLDIGVDVEALNSTIEILRTP--PHRM 259
G+ G HN N AA A G V N+ + R PHR+
Sbjct: 258 SGLP-----------GAHNKFNEEAAWQACRFFG------VSEANAARAVARFKPLPHRL 300
Query: 260 QIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
++V R+ GV +V+DSK T + + L +L GG+ K
Sbjct: 301 ELV-RERCGVLYVNDSKCTTVSSLKVALQAFD-RPLRLLCGGKFK 343
>gi|225619140|ref|YP_002720366.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Brachyspira
hyodysenteriae WA1]
gi|225213959|gb|ACN82693.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Brachyspira
hyodysenteriae WA1]
Length = 471
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 139/285 (48%), Gaps = 26/285 (9%)
Query: 27 RVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAA 86
+++ E++FA +P +AVTGT+GK+T VT V ++ +A + GN+GN S+
Sbjct: 111 KIIGEIEFAYNFLPNR-NYIAVTGTDGKTTTVTLVHDIIKSYK-KARLLGNVGNTFSKEI 168
Query: 87 FHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTK 146
+ + + ++E+SS+Q+E K F ++ VLN+ DHL+R+K +++Y TK
Sbjct: 169 -------ETIEEDEDVILELSSFQLETVEK-FHAHIAAVLNIAEDHLDRYKDIEDYFNTK 220
Query: 147 CHLFSHMVNTKLGLLPFGN-------QHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASF 199
++ + +L + N LN K + F + + E + +
Sbjct: 221 KNITINQNKNDFLILNYDNIYTNIWYNELNGNCKMKLLTFSLKSKFATIYYNEEDEYIYY 280
Query: 200 EVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRM 259
E + + N KV+G+HN N A L L DI VE + + + HR+
Sbjct: 281 ENEKL-----FSIANRKVIGKHNIANILAAVLICLKDDIP--VEYIEKAVNNFKGIEHRV 333
Query: 260 QIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
++V I GV +V+DSKAT++ + + L ++++GG+ K
Sbjct: 334 ELVAT-INGVKYVNDSKATSMNSVMSALKSF-DKDIILIMGGRNK 376
>gi|188584358|ref|YP_001927803.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
[Methylobacterium populi BJ001]
gi|179347856|gb|ACB83268.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Methylobacterium
populi BJ001]
Length = 455
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/278 (31%), Positives = 136/278 (48%), Gaps = 28/278 (10%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
+A+TGTNGKST +L H G + +GGN+G A +A P+ +V VV
Sbjct: 116 FVAITGTNGKSTTTALTAHLLRHAGRDVQMGGNIGT-----AVLSLAPPAEN---RVHVV 167
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFG 164
E+SS+Q+++ P+V ++LNLTPDHL+RH TM+NYA K L + +G+
Sbjct: 168 ELSSFQIDL-TPSLDPSVGILLNLTPDHLDRHGTMENYAAIKERLVAGSDLAVIGVDDAY 226
Query: 165 NQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYH 224
+ +G R L G D + + P V++++ ++G HN
Sbjct: 227 CAAIAGRRRGERIRLHVEGHGDAAG-DYVCRAGAVRGPDGAVIAEIS-GIQSLLGEHNLQ 284
Query: 225 NAAVAALSVLGLDI-GVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEAT 283
NAA A + L L + G ++ A + L HRM+ + R I +V+DSKATN ++T
Sbjct: 285 NAAAAVAAALRLGLTGAEIAAGLKSFPGL---AHRMEPLRR-IGPTLFVNDSKATNADST 340
Query: 284 CTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPL 321
L+ + ++ GG+AK E IEPL
Sbjct: 341 EKALLAFRDIHWIV--GGKAK----------EGGIEPL 366
>gi|295698678|ref|YP_003603333.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Candidatus Riesia
pediculicola USDA]
gi|291157135|gb|ADD79580.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Candidatus Riesia
pediculicola USDA]
Length = 439
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 150/287 (52%), Gaps = 29/287 (10%)
Query: 23 QSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPL 82
+ G ++ +++ + + R KI+++TG+NGKST + + ++ ++ +GGN+G P+
Sbjct: 87 RKGIEIIGDIELFCREVDRDKKIISITGSNGKSTTASVLTEIAKKANLKVGLGGNIGVPV 146
Query: 83 SEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK-TMKN 141
E + + + ++E+SS+Q+EI + +V+LN++ +H++R+ M
Sbjct: 147 LELLNY---------DYDIYILELSSFQLEITST-LKSIGAVILNISENHMDRYPFGMYQ 196
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKT-ASFE 200
Y K ++ N + ++ N+ + I F L++ +++T+ T FE
Sbjct: 197 YLSAKLKIYDFAKNCVINIMD--NRIWPKEIDKRNF-LSFGINSGDYRLNTKKNTIQRFE 253
Query: 201 VPAVGVVSQLQLHNMKVMGRHNYHN--AAVAALSVLGLDIGVDVEALNSTIEILRTPPHR 258
+ + +K++G+HN+ N A + ++G+ I + + ++ + PHR
Sbjct: 254 KDLI------HIKFIKIIGQHNHMNFLATLCLSEIIGIPINISLFVISRYSGL----PHR 303
Query: 259 MQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKG-HKCVILLGGQAK 304
+Q+VH+ GV W++DSK+TN+E+T L +K +K +LLGG +
Sbjct: 304 LQVVHKK-NGVIWINDSKSTNIESTIAALKSIKANNKIHLLLGGDKR 349
>gi|218258175|ref|ZP_03474577.1| hypothetical protein PRABACTJOHN_00231 [Parabacteroides johnsonii
DSM 18315]
gi|218225698|gb|EEC98348.1| hypothetical protein PRABACTJOHN_00231 [Parabacteroides johnsonii
DSM 18315]
Length = 453
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 154/317 (48%), Gaps = 29/317 (9%)
Query: 14 KATGLACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAF 73
KA + L + G ++SE++FA + K++ +TG+NGK+T +L G++
Sbjct: 84 KAPIIKKLKEKGTPIISEIEFAGRYT--DAKMICITGSNGKTTTTMLTYHILRQAGVDVG 141
Query: 74 VGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDH 132
+ GN+GN L AL ++ V V+E+SS+Q++ N Y F ++++LN+TPDH
Sbjct: 142 LAGNVGNSL--------ALQVAEDPHAVYVIELSSFQLD--NMYDFKADIAILLNITPDH 191
Query: 133 LERHK-TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAF-----P 186
L+R+ M+NY K + + + + + I R A + F
Sbjct: 192 LDRYNYEMQNYVDAKFRILQNQTAEDAFIFWNDDPIIAREI-AKRHPEATLYPFAETHEA 250
Query: 187 GVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALN 246
GVK TE K E + L + + G HN +N+ + ++ +DI E L
Sbjct: 251 GVKGYTEDKKIRIETSNGTFTMEQDL--LALSGTHNLYNSLASGIASKLVDIH--DENLR 306
Query: 247 STIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVL 306
+++ HR++ V R ++GV +++DSKATN+ + L + V++LGG K
Sbjct: 307 ASLSDFTGVEHRLEKVAR-VRGVDYINDSKATNVNSCWYALQSMTT-PLVLILGGTDK-- 362
Query: 307 NGQESNGFEKLIEPLNH 323
G + + E+L++ H
Sbjct: 363 -GNDYSEIEELVKKKVH 378
>gi|449941909|ref|ZP_21805736.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans 11A1]
gi|450051072|ref|ZP_21840644.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans NFSM1]
gi|449151466|gb|EMB55200.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans 11A1]
gi|449202203|gb|EMC03142.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans NFSM1]
Length = 451
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 152/300 (50%), Gaps = 29/300 (9%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L+ V++E++ A + I+ +TG+NGK+T T + +LNH G A + GN+G P
Sbjct: 93 LEKNIPVITEVELAYLI--SEAPIIGITGSNGKTTTTTMIADVLNHAGQSARLSGNIGFP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
SE +A P ++ + V+E+SS+Q+ + + F P ++V+ NL P H++ H + +N
Sbjct: 151 ASE-----VAQPVAEK--DILVMELSSFQL-MGTESFHPHMAVITNLMPTHIDYHGSFEN 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDT---EAKTAS 198
Y K ++ +M +L F NQ L + + ++ I K+D + +
Sbjct: 203 YIEAKWNIQKNMTEKDFLVLNF-NQDLVKDL-ANQTQAKIIPFSTKEKVDGAYLDGQMLC 260
Query: 199 FEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHR 258
F+ A+ S+L V G HN N A+A ++V L GV EA+ T+ HR
Sbjct: 261 FKGQAIMSASEL-----GVPGSHNVEN-ALATIAVAKLS-GVSNEAIRETLIHFGGVKHR 313
Query: 259 MQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
+Q + +I GV + +DSK+TN+ AT L K +++ GG + N F++L+
Sbjct: 314 LQSLG-NIAGVKFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------GNEFDELV 366
>gi|392389974|ref|YP_006426577.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Ornithobacterium
rhinotracheale DSM 15997]
gi|390521052|gb|AFL96783.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Ornithobacterium
rhinotracheale DSM 15997]
Length = 444
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 160/324 (49%), Gaps = 32/324 (9%)
Query: 14 KATGLACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAF 73
KA + L + +++SE++FA+ + I +A+TG+NGK+T + + ML G +
Sbjct: 76 KAALIQKLRKQNVKIISEIEFASWFTQKPI--IAITGSNGKTTTTSLIAHMLRKAGKKVG 133
Query: 74 VGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQM-EIPNKYFCPTVSVVLNLTPDH 132
+GGN+G +E L + + ++ V+E+SS+Q+ +I N F P V+++LN+TPDH
Sbjct: 134 LGGNIGYSFAE-------LVLNDEEHELYVLELSSFQLDDIDN--FKPHVAILLNITPDH 184
Query: 133 LERHK-TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKID 191
L+++ + Y K + + + + E +K H +G +K +
Sbjct: 185 LDQYDYDIDKYGEAKLRIAKNQTEEDFFIYNVDDPKTVELLKKHTIKAKMLGY--SLKDE 242
Query: 192 TEAKTASFE--VPAVGVVSQLQLHNMKVMGRHNYHNAAVAAL--SVLGLDIGVDVEALNS 247
+ A+ E + +++L + ++G HN N+ +AL ++L L + E+L
Sbjct: 243 HQPAYANEENLILTYPETFRMKLEELALLGEHNVSNSLASALNGNILKLRKKIIQESLTD 302
Query: 248 TIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLN 307
HR++ V ++G+ +++DSKATN+ AT L +K V ++GG+ K
Sbjct: 303 ----FDAVEHRLEPV-LSVRGIEFINDSKATNINATFYALQSMK-KPTVWIVGGKDK--- 353
Query: 308 GQESNGFEKLIEPLNHHRCVITEC 331
N + +LI PL + C
Sbjct: 354 ---GNDYSELI-PLVKKKVKAIVC 373
>gi|95930733|ref|ZP_01313466.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Desulfuromonas
acetoxidans DSM 684]
gi|95133213|gb|EAT14879.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Desulfuromonas
acetoxidans DSM 684]
Length = 448
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 131/271 (48%), Gaps = 31/271 (11%)
Query: 18 LACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGN 77
LA + G V E+++A++ + + ++A+TGTNGKST VGQML G FVGGN
Sbjct: 84 LAKAIDRGIPVWGEVEYASRHL--TAPVIAITGTNGKSTTTELVGQMLRGCGKRVFVGGN 141
Query: 78 LGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK 137
+G PL EAA + VVE+SS+Q+E ++ P +++LN++ DHL+R+
Sbjct: 142 IGVPLIEAAGQDV---------DYVVVELSSFQLETIDQLH-PRYALMLNVSVDHLDRYP 191
Query: 138 TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTE---A 194
M Y K +F++ + +L ++ + + G I + P V+ ++
Sbjct: 192 DMAAYVAAKKAIFANQTADDIAVLNGEDELVMAMVPG-------IDSRP-VRFSSQRLLE 243
Query: 195 KTASFEVPAV-----GVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTI 249
+ SF + G + + G HN N A + VL L+ G D E
Sbjct: 244 QGISFTQGTIHWCNKGEQCCFNTDELMLSGLHNIENVMAALVPVL-LE-GCDPEQAWQAA 301
Query: 250 EILRTPPHRMQIVHRDIQGVTWVDDSKATNL 280
PHRM +V R + GV W +DSK TNL
Sbjct: 302 CRFTGLPHRMVLV-RTLNGVRWYNDSKGTNL 331
>gi|59712810|ref|YP_205586.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Vibrio
fischeri ES114]
gi|59480911|gb|AAW86698.1| UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase [Vibrio fischeri
ES114]
Length = 404
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 148/294 (50%), Gaps = 44/294 (14%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
+ G +++ +++ A + + ++A+TG+NGKSTV G+M G++ VGGN+G
Sbjct: 53 IDKGIKIVGDIELFAWAV--NAPVIAITGSNGKSTVTDLTGEMAKAAGVKTAVGGNIG-- 108
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
AL + ++ V+E+SS+Q+E + + LNL+ DH++R++ M +
Sbjct: 109 -------FAALDLLEQDAELYVLELSSFQLETTSTLKL-KAAAFLNLSEDHMDRYQGMAD 160
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQH----LNEAIKGHRFNLAWIGAFPGVKIDTEAKTA 197
Y K +F H ++ ++ ++ + + +K F+ G I+ AK
Sbjct: 161 YRQAKLRIFEH---AEVCIVNRDDKQTYPDVEKTLKSFGFDQGDYGCIEKDGIEYLAKN- 216
Query: 198 SFEVPAVGVVSQLQLHNMKVMGRHNYHNA--AVAALSVLGLDIGVDVEALNSTIEILRTP 255
V L + + ++G+HN N+ A+A L G++ L++T++ LRT
Sbjct: 217 --------TVPLLAANELGLVGKHNIANSLVAIALLDAAGIN-------LDATLDTLRTY 261
Query: 256 ---PHRMQIVHRDIQGVTWVDDSKATNLEATCTGL--MDLKGHKCVILLGGQAK 304
HR Q+V D G+ WV+DSKATN+ +T L + L+G K +L+GG K
Sbjct: 262 NGLTHRCQVV-ADNNGIRWVNDSKATNVASTLAALSGLQLEG-KLHLLVGGVGK 313
>gi|343085408|ref|YP_004774703.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Cyclobacterium
marinum DSM 745]
gi|342353942|gb|AEL26472.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Cyclobacterium
marinum DSM 745]
Length = 447
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 140/274 (51%), Gaps = 25/274 (9%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
L+++G V+ EL+FA + K++A+TGTNGK+T + ++ G++ +GGN+G
Sbjct: 82 LVEAGIPVIDELEFAYRF--SKGKVIAITGTNGKTTTSLLIYHLMKRAGMDVGLGGNVG- 138
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQME--IPNKYFCPTVSVVLNLTPDHLER-HK 137
AL + V+EVSS+Q+E I K P+++V+LN++PDHL+R H
Sbjct: 139 -------QSWALQLVEKDHSWWVLEVSSFQIEGFIDLK---PSIAVLLNISPDHLDRYHY 188
Query: 138 TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFN--LAWIG--AFPGVKIDTE 193
+++ YA K L M + + +++EA+K + N L IG G K E
Sbjct: 189 SLEEYAAAKIKLTERMNAQDHFVFFEPDSNISEAMKSQKGNPTLVPIGLENLNGTKGYIE 248
Query: 194 AKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILR 253
+ + G+ + M + G HN+ N+ A ++V+ G D+ + ++
Sbjct: 249 DNKLNLAIN--GLNWSWPTNEMVLKGEHNFINSLAATMTVVL--AGADISKIGPALKDFV 304
Query: 254 TPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGL 287
HRM+ V I GV +++DSK TN++AT L
Sbjct: 305 NAAHRMEQVAT-INGVKFINDSKGTNVDATAFAL 337
>gi|378768550|ref|YP_005197023.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Pantoea ananatis
LMG 5342]
gi|365188036|emb|CCF10986.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Pantoea ananatis
LMG 5342]
Length = 438
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 137/283 (48%), Gaps = 63/283 (22%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+A+TG+NGKSTV T VG+M G + VGGN+G P AL K Q+ V+
Sbjct: 107 IVAITGSNGKSTVTTLVGEMAKAAGWQVGVGGNIGLP---------ALSLLKAPAQLYVL 157
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK-TMKNYALTKCHLFSH----MVNTKLG 159
E+SS+Q+E + + +LN+T DH++R+ M+ Y K ++ + +VN G
Sbjct: 158 ELSSFQLETTHS-LKAAAATILNVTEDHMDRYPLGMQQYRAAKLRIYENAQVCVVNADDG 216
Query: 160 L---------------LPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAV 204
+ + G+ HLN+ + W+ A G K+
Sbjct: 217 MTMPVRGADARCVSFGIDIGDYHLNK-----QQGSIWLRA-KGEKV-------------- 256
Query: 205 GVVSQLQLHNMKVMGRHNYHN--AAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIV 262
L M ++G+HNY N AA+A +GL + AL + + PHR Q+V
Sbjct: 257 -----LNTDEMTLVGQHNYTNALAALALADAVGLPRSTSLSALAAYSGL----PHRFQLV 307
Query: 263 HRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCV-ILLGGQAK 304
H+ +GV W++DSKATN+ +T L L+ + + +LLGG K
Sbjct: 308 HQS-RGVRWINDSKATNVGSTEAALKGLQVNGTLWLLLGGDGK 349
>gi|293365023|ref|ZP_06611740.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Streptococcus
oralis ATCC 35037]
gi|307702267|ref|ZP_07639227.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
oralis ATCC 35037]
gi|291316473|gb|EFE56909.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Streptococcus
oralis ATCC 35037]
gi|307624280|gb|EFO03257.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
oralis ATCC 35037]
Length = 450
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 144/300 (48%), Gaps = 29/300 (9%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L G V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LAKGIPVLTEVELAYLI--SEAPIIGITGSNGKTTTTTMIGEVLTAAGQRGLLSGNIGYP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A A + V+E+SS+Q+ + + F P ++V+ NL P H++ H + +
Sbjct: 151 ASQVAQTATAKDT-------LVMELSSFQL-MGVQEFHPEIAVITNLMPTHIDYHGSFEE 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDT---EAKTAS 198
Y K ++ + M +L F NQ L + + + + K+D E
Sbjct: 203 YVAAKWNIQNKMTAADFLVLNF-NQDLAKEL-ATKTQATVVPFSTQEKVDGAYLEDGQLY 260
Query: 199 FEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHR 258
F V S++ V G HN N A+A ++V L GVD + + T+ HR
Sbjct: 261 FRGEVVMAASEI-----GVPGSHNVEN-ALATIAVAKLR-GVDNQTIKETLSAFGGVKHR 313
Query: 259 MQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
+Q V +IQGV + +DSK+TN+ AT L K +++ GG + N F++L+
Sbjct: 314 LQFVD-EIQGVKFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------GNEFDELV 366
>gi|291616270|ref|YP_003519012.1| MurD [Pantoea ananatis LMG 20103]
gi|291151300|gb|ADD75884.1| MurD [Pantoea ananatis LMG 20103]
Length = 438
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 137/284 (48%), Gaps = 63/284 (22%)
Query: 44 KILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAV 103
I+A+TG+NGKSTV T VG+M G + VGGN+G P AL K Q+ V
Sbjct: 106 SIVAITGSNGKSTVTTLVGEMAKAAGWQVGVGGNIGLP---------ALSLLKAPAQLYV 156
Query: 104 VEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK-TMKNYALTKCHLFSH----MVNTKL 158
+E+SS+Q+E + + +LN+T DH++R+ M+ Y K ++ + +VN
Sbjct: 157 LELSSFQLETTHS-LKAAAATILNVTEDHMDRYPLGMQQYRAAKLRIYENAQVCVVNADD 215
Query: 159 GL---------------LPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPA 203
G+ + G+ HLN+ + W+ A G K+
Sbjct: 216 GMTMPVRGADARCVSFGIDIGDYHLNK-----QQGSIWLRA-KGEKV------------- 256
Query: 204 VGVVSQLQLHNMKVMGRHNYHN--AAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQI 261
L M ++G+HNY N AA+A +GL + AL + + PHR Q+
Sbjct: 257 ------LNTDEMTLVGQHNYTNALAALALADAVGLPRSTSLSALAAYSGL----PHRFQL 306
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCV-ILLGGQAK 304
VH+ +GV W++DSKATN+ +T L L+ + + +LLGG K
Sbjct: 307 VHQS-RGVRWINDSKATNVGSTEAALKGLQVNGTLWLLLGGDGK 349
>gi|449883572|ref|ZP_21785242.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans SA38]
gi|449925353|ref|ZP_21800214.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans 4SM1]
gi|449161617|gb|EMB64798.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans 4SM1]
gi|449249652|gb|EMC47759.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans SA38]
Length = 451
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 152/300 (50%), Gaps = 29/300 (9%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L+ V++E++ A + I+ +TG+NGK+T T + +LNH G A + GN+G P
Sbjct: 93 LEKNIPVITEVELAYLI--SEAPIIGITGSNGKTTTTTMIADVLNHAGQSARLSGNIGFP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
SE +A P ++ + V+E+SS+Q+ + + F P ++V+ NL P H++ H + +N
Sbjct: 151 ASE-----VAQPVAEK--DILVMELSSFQL-MGTESFHPHMAVITNLMPTHIDYHGSFEN 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDT---EAKTAS 198
Y K ++ +M +L F NQ L + + ++ I K+D + +
Sbjct: 203 YIEAKWNIQKNMTEKDFLVLNF-NQDLVKDL-ANQTQAKIIPFSTKEKVDGAYLDGQMLC 260
Query: 199 FEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHR 258
F+ A+ S+L V G HN N A+A ++V L GV EA+ T+ HR
Sbjct: 261 FKGQAIMSASEL-----GVPGSHNVEN-ALATIAVAKLS-GVSNEAIRETLIHFGGVKHR 313
Query: 259 MQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
+Q + +I GV + +DSK+TN+ AT L K +++ GG + N F++L+
Sbjct: 314 LQSLG-NIAGVKFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------GNEFDELV 366
>gi|421527284|ref|ZP_15973887.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Fusobacterium
nucleatum ChDC F128]
gi|402256492|gb|EJU06971.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Fusobacterium
nucleatum ChDC F128]
Length = 432
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 146/311 (46%), Gaps = 39/311 (12%)
Query: 9 LEFQLKATGLAC------LLQSGKRVMSELDFAAQ-VIPRSIK--ILAVTGTNGKSTVVT 59
LEF +K+ G+ + + G +V+ E++ A +I + +K I+A+TGTNGKST
Sbjct: 48 LEFFIKSPGIPYNDFVKEVQKRGIKVLDEIEIAYNYMIEKGLKTKIIAITGTNGKSTTTA 107
Query: 60 FVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQME-IPNKYF 118
+ MLNH G +A GN+G LSE + +E+SS+Q+E I N F
Sbjct: 108 KISDMLNHAGYKAAYAGNIGRSLSEVLL-------KEKDLDFISLELSSFQLENIEN--F 158
Query: 119 CPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNE---AIKGH 175
P +S+++N+ PDH+ER+K+ Y TK ++ + + + + + IK
Sbjct: 159 KPYISMIINMGPDHIERYKSFDEYYNTKFNITKNQTEDLYFIENIDDVEIEKRASQIKAK 218
Query: 176 RFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNA--AVAALSV 233
R + + F I E E ++ V +L L G HN N VA +
Sbjct: 219 RIS---VSKFKKADIFVENDKICHEKNSIIDVDKLSLK-----GIHNLENTLFMVATAEI 270
Query: 234 LGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGH 293
L +D E L + I HR ++ + + +++DSKATN+++T + K
Sbjct: 271 L----KIDREKLKEFLMIATPLEHRTELFF-NYGKLKFINDSKATNVDSTKFAIQANKN- 324
Query: 294 KCVILLGGQAK 304
+++ GG K
Sbjct: 325 -SILICGGYDK 334
>gi|417924146|ref|ZP_12567598.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
mitis SK569]
gi|342836200|gb|EGU70416.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
mitis SK569]
Length = 450
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 147/301 (48%), Gaps = 31/301 (10%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L G V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LAKGIPVLTEVELAYLI--SEAPIIGITGSNGKTTTTTMIGEVLTAAGQHGLLSGNIGYP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A S K V+E+SS+Q+ + + F P ++V+ NL P H++ H + +
Sbjct: 151 ASQVAQTA----SDKDTL---VMELSSFQL-MGVQEFHPEIAVITNLMPTHIDYHGSFEE 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGV-KIDT---EAKTA 197
Y K ++ + M +T +L F NQ L + + A + F K+D E
Sbjct: 203 YVAAKWNIQNKMTSTDFLVLNF-NQDLAKELTSK--TQATVVPFSTQEKVDGAYLEDGQL 259
Query: 198 SFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPH 257
F V S++ V G HN N A+A ++V L GVD + + T+ H
Sbjct: 260 YFRGEVVMAASEI-----GVPGSHNVEN-ALATIAVAKLR-GVDNQTIKETLSAFGGVKH 312
Query: 258 RMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKL 317
R+Q V +I+GV + +DSK+TN+ AT L K +++ GG + N F++L
Sbjct: 313 RLQFVD-EIKGVKFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------GNEFDEL 365
Query: 318 I 318
+
Sbjct: 366 V 366
>gi|194335053|ref|YP_002016913.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Prosthecochloris
aestuarii DSM 271]
gi|194312871|gb|ACF47266.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Prosthecochloris
aestuarii DSM 271]
Length = 469
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 96/307 (31%), Positives = 144/307 (46%), Gaps = 56/307 (18%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQM-LNHL---GIEAFVGGNLGNPLS 83
V SE++ A+ P +I+AVTGT+GK+T T + + +H G F GN+G P S
Sbjct: 97 VYSEIEAASWFCP--ARIIAVTGTDGKTTTATLIAAICADHALAAGYRVFSVGNIGVPFS 154
Query: 84 EAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK-TMKNY 142
++ S +AVVEVSSYQ+E +F P ++++ N+TPDHL+R+ +M+ Y
Sbjct: 155 -------SMVGSMASGDIAVVEVSSYQLE-GCTWFRPDIALMTNITPDHLDRYDGSMRLY 206
Query: 143 ALTKCHLFSH-------MVNT-----------KLGLLP----FG---NQHLNEAIKGHRF 177
A K +FS +VN +LG++P FG + A G
Sbjct: 207 AEAKYRIFSRQRQDDTLIVNADDPILRQRFEERLGVVPQLAAFGLDAGRTRAFAASGAVT 266
Query: 178 NLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLD 237
WI F +D V++ L MGRHN NA AAL+
Sbjct: 267 EGGWITLFKSGSLDER------------VIAHEDLLKRGFMGRHNLSNALAAALAA--DA 312
Query: 238 IGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVI 297
GV + ++ ++ HR + V +I GV ++DSKATNL A L + G V+
Sbjct: 313 AGVPLSSIKRALKAFGGVEHRQEYVC-EIDGVICINDSKATNLNAMRQALEAVSG-PVVL 370
Query: 298 LLGGQAK 304
+ GG+ K
Sbjct: 371 IAGGRDK 377
>gi|261401755|ref|ZP_05987880.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Neisseria
lactamica ATCC 23970]
gi|269208133|gb|EEZ74588.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Neisseria
lactamica ATCC 23970]
Length = 445
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 141/289 (48%), Gaps = 30/289 (10%)
Query: 23 QSGKRVMSELDFAAQVI-PRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
Q+G RV+ +++ A ++ R K++A+TG+NGK+TV + VG + G++ + GN+G P
Sbjct: 89 QNGGRVLGDIELLADIVNRRGDKVIAITGSNGKTTVTSLVGYLCIKCGLDTVIAGNIGTP 148
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
+ EA + K V V+E+SS+Q+E + PT + VLN++ DHL+R+ + +
Sbjct: 149 VLEAEWQ-----REGKKADVWVLELSSFQLE-NTESLRPTAATVLNISEDHLDRYDDLLD 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLN------EAIKGHRFNLAWIGAFPGVKIDTEAK 195
YA TK +F G Q LN A+K + W E +
Sbjct: 203 YAHTKDKIFRGD----------GVQVLNADDVFCRAMKRAGREVKWFSLEHEADFWLERE 252
Query: 196 TASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTP 255
T + G + ++ + G H + A V A L +G+ L ++ +
Sbjct: 253 TGRLK---QGDEDLIATQDIPLQGLH--NAANVMAAVALCEAVGLPRNELLEHVKTFQGL 307
Query: 256 PHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
PHR++ + + GV ++DDSK TN+ AT + L+ + ++LGG K
Sbjct: 308 PHRVEKIG-EKNGVVFIDDSKGTNVGATVAAIAGLQ-NPLFVILGGMGK 354
>gi|212692810|ref|ZP_03300938.1| hypothetical protein BACDOR_02309 [Bacteroides dorei DSM 17855]
gi|345514543|ref|ZP_08794054.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides dorei
5_1_36/D4]
gi|212664599|gb|EEB25171.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Bacteroides
dorei DSM 17855]
gi|229436645|gb|EEO46722.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides dorei
5_1_36/D4]
Length = 444
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 148/306 (48%), Gaps = 30/306 (9%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
L G ++SE++FA + + K++ +TG+NGK+T + + + G+ + GN+G
Sbjct: 83 LKAQGTPIISEIEFAGRYT--NAKMICITGSNGKTTTTSLIYHIFKKAGMNVGLAGNIGQ 140
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDHLERHK-T 138
L A ++ + V+E+SS+Q++ N Y F ++V++N+TPDHL+R+
Sbjct: 141 SL--------AYQVAEYNYDYYVIELSSFQLD--NMYKFHANIAVLMNITPDHLDRYDHQ 190
Query: 139 MKNYALTKCHLFSHMVNTKLGLL----PFGNQHLNE-AIKGHRFNLAWIGAFPGVKIDTE 193
M+NY K + + + P + L++ I GH + A G E
Sbjct: 191 MQNYVDAKFRIIQNQTPDDAFIFWNDDPVIQRELHKYGIHGHYYPFAERKE-EGTAAYVE 249
Query: 194 AKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILR 253
F P + ++ + + G HN N+ A +S L G+ E + + +
Sbjct: 250 QDKVYFTEP---IAFNMEQEELALTGTHNLFNSMAAGISA-NL-AGIRKECIREALGDFK 304
Query: 254 TPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNG 313
HR++ V R ++GV +++DSKATN+ + L +K K +++LGG+ K G + N
Sbjct: 305 GVEHRLEKVCR-VRGVDYINDSKATNVNSCWYALQSMKT-KTILILGGKDK---GNDYNE 359
Query: 314 FEKLIE 319
L++
Sbjct: 360 IADLVK 365
>gi|423342823|ref|ZP_17320537.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Parabacteroides
johnsonii CL02T12C29]
gi|409217078|gb|EKN10057.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Parabacteroides
johnsonii CL02T12C29]
Length = 453
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 155/317 (48%), Gaps = 29/317 (9%)
Query: 14 KATGLACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAF 73
KA + L + G ++SE++FA + K++ +TG+NGK+T +L G++
Sbjct: 84 KAPIIKKLKEKGTPIISEIEFAGRYT--DAKMICITGSNGKTTTTMLTYHILRQAGVDVG 141
Query: 74 VGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDH 132
+ GN+GN L AL ++ V V+E+SS+Q++ N Y F ++V+LN+TPDH
Sbjct: 142 LAGNVGNSL--------ALQVAEDPHAVYVIELSSFQLD--NMYDFKADIAVLLNITPDH 191
Query: 133 LERHK-TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAF-----P 186
L+R+ M+NY K + + + + + + + R A + F
Sbjct: 192 LDRYNYEMQNYVDAKFRILQNQT-VEDAFIFWNDDPIIAREIAKRHPEATLYPFAETHEA 250
Query: 187 GVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALN 246
GVK TE K E + L + + G HN +N+ + ++ +DI E L
Sbjct: 251 GVKGYTEDKKIRIETSNGTFTMEQDL--LALSGTHNLYNSLASGIASKLVDIH--DENLR 306
Query: 247 STIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVL 306
+++ HR++ V R ++GV +++DSKATN+ + L + V++LGG K
Sbjct: 307 ASLSDFTGVEHRLEKVAR-VRGVDYINDSKATNVNSCWYALQSMTT-PLVLILGGTDK-- 362
Query: 307 NGQESNGFEKLIEPLNH 323
G + + E+L++ H
Sbjct: 363 -GNDYSEIEELVKKKVH 378
>gi|406600242|ref|YP_006745588.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Leuconostoc
gelidum JB7]
gi|406371777|gb|AFS40702.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Leuconostoc
gelidum JB7]
Length = 448
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/259 (31%), Positives = 133/259 (51%), Gaps = 19/259 (7%)
Query: 44 KILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAV 103
+++AVTG+NGK+T + + ML G + GN+G P+ E + A + +
Sbjct: 111 RLIAVTGSNGKTTTTSLIRDMLKSDGQKVTTAGNIGIPVCEVIKNLTADDT-------LL 163
Query: 104 VEVSSYQ-MEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLP 162
+E+SS+Q M P+ P ++++ N+ +HL+ H T +NY K L + +L +L
Sbjct: 164 LELSSFQLMGTPD--IRPDIALITNIFANHLDYHGTRENYVTAKFQLTKNQTTNQLLVLN 221
Query: 163 FGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHN 222
Q ++ IK A + AF +K + +T S ++ G + L ++K++G HN
Sbjct: 222 ADGQDTDDFIKKTH---AKVVAFSRIKNEYTVRTDSVDLIISG-NHLMPLSDIKLVGPHN 277
Query: 223 YHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEA 282
N VAA++V L GV A+ +E HR+Q V D GVT+ +DSKAT++EA
Sbjct: 278 LEN-IVAAVTVAKL-AGVHDVAIRHVLETFGGVKHRLQHVFTD-NGVTFYNDSKATDIEA 334
Query: 283 TCTGLMDLKGHKCVILLGG 301
T T L H+ I L G
Sbjct: 335 TQTALNSF--HQPTIWLAG 351
>gi|392552613|ref|ZP_10299750.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Pseudoalteromonas
spongiae UST010723-006]
Length = 435
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 135/286 (47%), Gaps = 46/286 (16%)
Query: 25 GKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSE 84
G V+ +++ A++ +++ AVTG+NGKS+VVT +L G + + GN+G P+
Sbjct: 93 GVEVIGDVELFARINTKAV--YAVTGSNGKSSVVTLTRDVLKQAGYKVALAGNIGTPV-- 148
Query: 85 AAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYAL 144
L + V+E+SS+Q+E + C S VLN++ DH++R+ ++ +YA
Sbjct: 149 -------LDVIDQDYDCYVLELSSFQLETTHSLVCEA-SCVLNISEDHMDRYDSLGDYAY 200
Query: 145 TKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAV 204
K + H +K ++ F + L PGV + +
Sbjct: 201 AKQRIHLH---SKHVVVNFDDA------------LTHCEQTPGVSFGAQQGDYTISQQCF 245
Query: 205 GVVSQ--LQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTP------- 255
V + L +KV+G HN N AL+V+ L +E L +++ +T
Sbjct: 246 NVHGKQMLSTDELKVIGLHNQLN----ALAVMAL-----LENLKLPVDVFKTAFNQFSGL 296
Query: 256 PHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGG 301
HR Q+V D GV +V+DSKATN+ AT L L K +ILL G
Sbjct: 297 AHRCQLVCED-NGVLYVNDSKATNVGATQAALTSLAKGKNIILLAG 341
>gi|336123370|ref|YP_004565418.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio anguillarum
775]
gi|335341093|gb|AEH32376.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio anguillarum
775]
Length = 444
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 138/291 (47%), Gaps = 39/291 (13%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
++A+TG NGKSTV G + G++ VGGN+G P AL + + + V+
Sbjct: 115 VIAITGANGKSTVTDLTGVLAKAAGVKVAVGGNIGVP---------ALDLLQQEADLYVL 165
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSH----MVNTKLGL 160
E+SS+Q+E + + + LNLT DH++R+ M++Y K +F + +VN
Sbjct: 166 ELSSFQLETTSSLKLVS-AAFLNLTEDHMDRYDGMESYRQAKLRIFKYAQAAVVNAD--- 221
Query: 161 LPFGNQHLNEAIKGH--RFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVM 218
+Q + GH RF++ + ID ++ + P L + ++
Sbjct: 222 ---DSQTEPPSFSGHIARFSVEHDADYCTQMIDGKSFLVAKGTPL------LASEELSLV 272
Query: 219 GRHNYHN--AAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSK 276
GRHN N +A L + G+D ++AL S R HR Q+V D GV WV+DSK
Sbjct: 273 GRHNSANVLTVLALLDLAGVDYSSALDALKS----YRGLTHRCQVV-ADNHGVKWVNDSK 327
Query: 277 ATNLEATCTGLMDLKGHKCVILL-GGQAKVLNGQESNGFEKLIEPLNHHRC 326
ATN+ +T L L + LL GG K G + + +++ LN C
Sbjct: 328 ATNVASTQAALSGLNCQGTLYLLVGGVGK---GADFSPLAPILKTLNVKLC 375
>gi|383938512|ref|ZP_09991721.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
pseudopneumoniae SK674]
gi|418973968|ref|ZP_13521907.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
pseudopneumoniae ATCC BAA-960]
gi|383346187|gb|EID24252.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
pseudopneumoniae ATCC BAA-960]
gi|383714572|gb|EID70569.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
pseudopneumoniae SK674]
Length = 450
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 139/284 (48%), Gaps = 25/284 (8%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L G V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LAKGIPVLTEVELAYLI--SEAPIIGITGSNGKTTTTTMIGEVLTAAGQHGLLSGNIGYP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A S K V+E+SS+Q+ + + F P ++V+ NL P H++ H + +
Sbjct: 151 ASQVAQTA----SDKDTL---VMELSSFQL-MGVQEFHPEIAVITNLMPTHIDYHGSFEE 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGV-KIDT---EAKTA 197
Y K ++ + M +L F NQ L + + A + F + K+D E
Sbjct: 203 YVAAKWNIQNKMTAADFLVLNF-NQDLAKELASK--TQATVVPFSTLEKVDGAYLEDGQL 259
Query: 198 SFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPH 257
F V S++ V G HN N A+A ++V L GVD + + T+ H
Sbjct: 260 YFRGEVVMAASEI-----GVPGSHNVEN-ALATIAVAKLR-GVDNQTIKETLSAFGGVKH 312
Query: 258 RMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGG 301
R+Q V +IQGV + +DSK+TN+ AT L K V++ GG
Sbjct: 313 RLQFVD-EIQGVKFYNDSKSTNILATQKALSGFDNSKVVLIAGG 355
>gi|345874734|ref|ZP_08826534.1| hypothetical protein l11_06150 [Neisseria weaveri LMG 5135]
gi|343970093|gb|EGV38291.1| hypothetical protein l11_06150 [Neisseria weaveri LMG 5135]
Length = 445
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 137/283 (48%), Gaps = 18/283 (6%)
Query: 23 QSGKRVMSELDFAA-QVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
QSG V+ +++ A ++ +S KI+A+TG+NGK+TV + VG + G++ V GN+G P
Sbjct: 89 QSGGVVLGDVEILAHELKGKSDKIIAITGSNGKTTVTSLVGYLCEKCGLDTVVAGNIGTP 148
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
+ EA + V V+E+SS+Q+E + + +VVLN++ DHL+R+ + +
Sbjct: 149 VLEA-----YMQRGGKAADVWVLELSSFQLENTD-HLAADAAVVLNISEDHLDRYDDLLD 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEV 201
YA K +F L + + A+K ++ W T+ +T +
Sbjct: 203 YAHAKDKIFRGSGVQVLN----ADDAMCRAMKRPNRDIKWFSLEGQADYWTDVQTGRLK- 257
Query: 202 PAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQI 261
G L + + G HN N A +G+ L I+ + PHR++
Sbjct: 258 --AGANDLLDTAAIPLQGLHNAANVLAALALCEA--VGLPRTELLQHIQTFKGLPHRVEK 313
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
V G+T++DDSK TN+ AT + L+ V++ GGQ K
Sbjct: 314 VGEK-NGITFIDDSKGTNVGATAAAIAGLQ-SPLVLIAGGQGK 354
>gi|416999197|ref|ZP_11939866.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Veillonella
parvula ACS-068-V-Sch12]
gi|333977350|gb|EGL78209.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Veillonella
parvula ACS-068-V-Sch12]
Length = 456
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 92/284 (32%), Positives = 145/284 (51%), Gaps = 19/284 (6%)
Query: 25 GKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSE 84
G V+SE++ A +V I+AVTGTNGK+T T + ++L G VGGN+G+ LSE
Sbjct: 92 GIDVVSEVELAYEV--SKSPIVAVTGTNGKTTTTTLLTKVLEGSGKPVHVGGNIGDSLSE 149
Query: 85 AAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYAL 144
A+ S P V E+SSYQ+E KYF P +++LN+TPDHL RHKTM+NY
Sbjct: 150 VAY-------SMPAGGFLVAELSSYQLETI-KYFRPIGAIMLNITPDHLARHKTMENYIA 201
Query: 145 TKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAV 204
K +F + ++T +L + + + ++ I V+ +
Sbjct: 202 AKERIFENQLSTDYLVLNIDDPVVADMEHRSPSHILKISQKKAVENGAYYADGQCYIAKD 261
Query: 205 GVVS-QLQLHNMKVMGRHNYHNAAVAALSVLGLD--IGVDVEALNSTIEILRTPPHRMQI 261
GV + ++ + G HN N L+V+ L +GV VE ++ I HR++
Sbjct: 262 GVAKFVIGNEDIHIPGSHNIEN----ILTVIALSHALGVPVETIHRIISEFHGVEHRLER 317
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKV 305
V + I G+T+ +DSKATN+++ L + ++L GG K+
Sbjct: 318 V-KTIDGITFYNDSKATNVDSVVKALESFD-QQVILLAGGHDKM 359
>gi|418967472|ref|ZP_13519135.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
mitis SK616]
gi|383344085|gb|EID22255.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
mitis SK616]
Length = 450
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 147/301 (48%), Gaps = 31/301 (10%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L G V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LAKGIPVLTEVELAYLI--SEAPIIGITGSNGKTTTTTMIGEVLTAAGQHGLLSGNIGYP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A S K V+E+SS+Q+ + + F P ++V+ NL P H++ H + +
Sbjct: 151 ASQVAQTA----SDKDTL---VMELSSFQL-MGVQEFHPEIAVITNLMPTHIDYHGSFEE 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPG-VKIDT---EAKTA 197
Y K ++ + M +T +L F NQ L + + A + F K+D E
Sbjct: 203 YVAAKWNIQNKMTSTDFLVLNF-NQDLAKELTSK--TQATVVPFSTQEKVDGAYLEDGQL 259
Query: 198 SFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPH 257
F V S++ V G HN N A+A ++V L GVD + + T+ H
Sbjct: 260 YFRGEVVMAASEI-----GVPGSHNVEN-ALATIAVAKLR-GVDNQTIKETLSAFGGVKH 312
Query: 258 RMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKL 317
R+Q V +I+GV + +DSK+TN+ AT L K +++ GG + N F++L
Sbjct: 313 RLQFVD-EIKGVKFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------GNEFDEL 365
Query: 318 I 318
+
Sbjct: 366 V 366
>gi|315612789|ref|ZP_07887700.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Streptococcus
sanguinis ATCC 49296]
gi|419782972|ref|ZP_14308768.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
oralis SK610]
gi|315314899|gb|EFU62940.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Streptococcus
sanguinis ATCC 49296]
gi|383182706|gb|EIC75256.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
oralis SK610]
Length = 450
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 146/301 (48%), Gaps = 31/301 (10%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L G V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LAKGIPVLTEVELAYLI--SEAPIIGITGSNGKTTTTTMIGEVLTAAGQHGLLSGNIGYP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A A + V+E+SS+Q+ + + F P ++V+ NL P H++ H + +
Sbjct: 151 ASQVAQTATAKDT-------LVMELSSFQL-MGVQEFHPEIAVITNLMPTHIDYHGSFEE 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGV-KIDT---EAKTA 197
Y K ++ + M +L F NQ L + + A + F + K+D E
Sbjct: 203 YVAAKWNIQNKMTAADFLVLNF-NQDLAKDLASK--TQATVVPFSTLEKVDGAYLEDGQL 259
Query: 198 SFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPH 257
F V S++ V G HN N A+A ++V L GVD + + T+ H
Sbjct: 260 YFRGEVVMAASEI-----GVPGSHNVEN-ALATIAVAKLR-GVDNQTIKETLSSFGGVKH 312
Query: 258 RMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKL 317
R+Q V +IQGV + +DSK+TN+ AT L K +++ GG + N F++L
Sbjct: 313 RLQFVD-EIQGVKFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------GNEFDEL 365
Query: 318 I 318
+
Sbjct: 366 V 366
>gi|300869645|ref|YP_003784516.1| hypothetical protein BP951000_0006 [Brachyspira pilosicoli 95/1000]
gi|300687344|gb|ADK30015.1| hypothetical protein BP951000_0006 [Brachyspira pilosicoli 95/1000]
Length = 465
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 146/288 (50%), Gaps = 30/288 (10%)
Query: 27 RVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAA 86
+V+ E++FA +IP ++VTGT+GK+T V + +++ +A + GN+GN S+
Sbjct: 110 KVIGEIEFAYNLIPDR-NYISVTGTDGKTTTVNLIYSIISSYK-KARLLGNVGNTFSKEV 167
Query: 87 FHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTK 146
S K + V+E+SS+Q+E + F +SV+LN+ DHL+R+K +++Y K
Sbjct: 168 -------ESIEKDEDIVLELSSFQLETVDN-FHSHISVILNIAEDHLDRYKDIEDYFNAK 219
Query: 147 CHLFSHMVNTKLGLL----PFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASF--- 199
++ + + +L + N + NE IK +F + T+ K A+
Sbjct: 220 KNITKNQNSNDFLILNYDNSYTNSYYNELIKTKDI------SFNVLTFSTKNKEANLYYN 273
Query: 200 ---EVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPP 256
E + K++G HN N + L+ + +I +E ++ + ++
Sbjct: 274 SEDECLYYNGEKIFSIAKRKLLGMHNIENILASVLACIKDNIP--IEYIDKAVNNFKSIE 331
Query: 257 HRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
HR++ V ++I GV +++DSKAT++ A + L + ++++GG+ K
Sbjct: 332 HRLEFV-KEIDGVRYINDSKATSMSAVMSALKSFDKN-IILIMGGRNK 377
>gi|418148133|ref|ZP_12784898.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA13856]
gi|353812808|gb|EHD93041.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA13856]
Length = 450
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 146/297 (49%), Gaps = 23/297 (7%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L G V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LAKGIPVLTEVELAYLI--SEAPIIGITGSNGKTTTTTMIGEVLTAAGQHGLLSGNIGYP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A + S K V+E+SS+Q+ + + F P ++V+ NL P H++ H +
Sbjct: 151 ASQVA----QIASDK---NTLVMELSSFQL-MGVQEFHPEIAVITNLMPTHIDYHGSFSE 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEV 201
Y K ++ + M +L F NQ L + + A + F ++ A ++
Sbjct: 203 YVAAKWNIQNKMTAADFLVLNF-NQDLAKDLTSK--TEATVVPFSTLEKVDGAYLEDGQL 259
Query: 202 PAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQI 261
G V + + + V G HN N A+A ++V L GVD + + T+ HR+Q
Sbjct: 260 YFRGEVV-MAANEIGVPGSHNVEN-ALATIAVAKLR-GVDNQTIKETLSAFGGVKHRLQF 316
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
V DI+GV + +DSK+TN+ AT L K V++ GG + N F++L+
Sbjct: 317 VD-DIKGVKFYNDSKSTNILATQKALSGFDNSKVVLIAGGLDR------GNEFDELV 366
>gi|227118847|ref|YP_002820743.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
O395]
gi|227014297|gb|ACP10507.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
O395]
Length = 467
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 97/324 (29%), Positives = 151/324 (46%), Gaps = 53/324 (16%)
Query: 2 WML-WLFLLEFQLKATGLAC-------LLQSGKRVMSELD-FAAQVIPRSIKILAVTGTN 52
W L WL + + G+A +L +G V+ +++ FA V ++A+TG+N
Sbjct: 88 WNLEWLLNADLVVTNPGIALATPEIQQVLAAGIPVVGDIELFAWHV---DTPVIAITGSN 144
Query: 53 GKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQME 112
GKSTV G + N G++A VGGN+G P AL P ++ V+E+SS+Q+E
Sbjct: 145 GKSTVTDLSGVLANAAGVKAAVGGNIGVP---------ALDLISPDVELYVLELSSFQLE 195
Query: 113 IPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSH----MVNT-KLGLLPFGNQH 167
+ + LNL+ DH++R++ M +Y K +F H +VN P H
Sbjct: 196 TTSSLKL-KAAAFLNLSEDHMDRYQGMGDYRQAKLRIFDHAETAVVNADDTQTFPDHAAH 254
Query: 168 LNEAIKG----HRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNY 223
L G +F+LA + EA A E + ++GRHN
Sbjct: 255 LQVVTFGVEQAAQFSLAQHQGREYLFARDEAVMACAE--------------LSLVGRHNV 300
Query: 224 HN--AAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLE 281
N +A L G++ + ++AL S + HR Q+V D G+ WV+DSKATN+
Sbjct: 301 TNVLTVLALLDSAGVNFRLALDALKSYTGL----THRCQVV-ADNHGIKWVNDSKATNVA 355
Query: 282 ATCTGLMDLKGH-KCVILLGGQAK 304
+T L LK + +L+GG K
Sbjct: 356 STLAALSGLKIEGQLYLLVGGVGK 379
>gi|87199153|ref|YP_496410.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Novosphingobium
aromaticivorans DSM 12444]
gi|118595671|sp|Q2G997.1|MURD_NOVAD RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|87134834|gb|ABD25576.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Novosphingobium
aromaticivorans DSM 12444]
Length = 443
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/250 (31%), Positives = 120/250 (48%), Gaps = 40/250 (16%)
Query: 44 KILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAV 103
+++ +TGTNGKST V + G+ A +GGN+G P I P+ V V
Sbjct: 110 RVVGITGTNGKSTTTMLVHHICAAAGLPARLGGNIGLP--------ILGQEPLPEGGVYV 161
Query: 104 VEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPF 163
+E+SSYQ+++ C V+ ++NL+PDHL+R+ YA +K LF+ + +
Sbjct: 162 LELSSYQIDLTQSLAC-DVAALINLSPDHLDRYDGFAGYAASKARLFAMQRADQHAVFGC 220
Query: 164 GNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNM----KVMG 219
G++H ++I EA +A+ + V VV LH + G
Sbjct: 221 GDEHT-------------------LEIAREA-SATHDTGFVHVVQPSALHGQLEWPSLQG 260
Query: 220 RHNYHNAAVAALSVLGLDIGVDV--EALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKA 277
HN NAA+A L I D+ AL S + + PHRM+ V + GV +V+DSKA
Sbjct: 261 PHNLQNAAIAVEIARQLGIAEDIWRSALASFVGL----PHRMERV-AEANGVLFVNDSKA 315
Query: 278 TNLEATCTGL 287
TN +T L
Sbjct: 316 TNPASTAPAL 325
>gi|417939990|ref|ZP_12583278.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
oralis SK313]
gi|343388871|gb|EGV01456.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
oralis SK313]
Length = 450
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 144/300 (48%), Gaps = 29/300 (9%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L G V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LAKGIPVLTEVELAYLI--SEAPIIGITGSNGKTTTTTMIGEVLTAAGQRGLLSGNIGYP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A A + V+E+SS+Q+ + + F P ++V+ NL P H++ H + +
Sbjct: 151 ASQVAQTATAKDT-------LVMELSSFQL-MGVQEFHPEIAVITNLMPTHIDYHGSFEE 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKID---TEAKTAS 198
Y K ++ + M +L F NQ L + + + + K+D E
Sbjct: 203 YVAAKWNIQNKMTADDFLVLNF-NQDLAKEL-ATKTQATVVPFSTQEKVDGAYLEDGQLY 260
Query: 199 FEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHR 258
F V S++ V G HN N A+A ++V L GVD + + T+ HR
Sbjct: 261 FRGEVVMAASEI-----GVPGSHNVEN-ALATIAVAKLR-GVDNQTIKETLSAFGGVKHR 313
Query: 259 MQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
+Q V +IQGV + +DSK+TN+ AT L K +++ GG + N F++L+
Sbjct: 314 LQFVD-EIQGVKFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------GNEFDELV 366
>gi|188585928|ref|YP_001917473.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Natranaerobius
thermophilus JW/NM-WN-LF]
gi|226722938|sp|B2A2H0.1|MURD_NATTJ RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|179350615|gb|ACB84885.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Natranaerobius
thermophilus JW/NM-WN-LF]
Length = 461
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 145/292 (49%), Gaps = 31/292 (10%)
Query: 25 GKRVMSELDFAAQVIPRSI-----KILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLG 79
G V+ EL+ Q++ + +++AVTGTNGK+T +G+ G +V GN+G
Sbjct: 93 GMPVIDELELGYQILNYRLTKPEERLIAVTGTNGKTTTTNLIGEFFEASGYSIYVAGNVG 152
Query: 80 NPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTM 139
PLS+ IA + F V+EVSS+Q+E K F P VS++LN+TPDHL+ H +
Sbjct: 153 LPLSQ-----IACEVTDTDF--IVLEVSSFQLEFI-KGFRPKVSMILNITPDHLDWHGDL 204
Query: 140 KNYALTKCHLFSHMVNTKLGLLPFGNQH---LNEAIKGHRFNLAWIGAFPGVKIDTEAKT 196
+Y K ++F + + ++ ++ LN KG + N F + TE
Sbjct: 205 DSYIRAKMNIFKNQTSKDFSVVNVDDETTFGLNRESKGRKLN------FSKNSLRTEGSF 258
Query: 197 ASFEVPAVGVV----SQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEIL 252
+ + + S + H++ + G HN N A + L I E + +T++
Sbjct: 259 IEDDHLVINYLDTKTSIIHKHDILLPGEHNLENVLAATTATLPFSIS--EENIRNTLKAF 316
Query: 253 RTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
HR+++V R++ GV +++DSK TN+EA+ + +++ GG+ K
Sbjct: 317 SGVDHRLELV-RELNGVKFINDSKGTNVEASLKAINSFDS--MILIAGGKDK 365
>gi|333398686|ref|ZP_08480499.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Leuconostoc
gelidum KCTC 3527]
Length = 449
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/259 (31%), Positives = 133/259 (51%), Gaps = 19/259 (7%)
Query: 44 KILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAV 103
+++AVTG+NGK+T + + ML G + GN+G P+ E + A + +
Sbjct: 112 RLIAVTGSNGKTTTTSLIRDMLKSDGQKVTTAGNIGIPVCEVIKNLTADDT-------LL 164
Query: 104 VEVSSYQ-MEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLP 162
+E+SS+Q M P+ P ++++ N+ +HL+ H T +NY K L + +L +L
Sbjct: 165 LELSSFQLMGTPD--IRPDIALITNIFANHLDYHGTRENYVTAKFQLTKNQTTNQLLVLN 222
Query: 163 FGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHN 222
Q ++ IK A + AF +K + +T S ++ G + L ++K++G HN
Sbjct: 223 ADGQDTDDFIKKTH---AKVVAFSRIKNEYTVRTDSVDLIISG-NHLMPLSDIKLVGPHN 278
Query: 223 YHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEA 282
N VAA++V L GV A+ +E HR+Q V D GVT+ +DSKAT++EA
Sbjct: 279 LEN-IVAAVTVAKL-AGVHDVAIRHVLETFGGVKHRLQHVFTD-NGVTFYNDSKATDIEA 335
Query: 283 TCTGLMDLKGHKCVILLGG 301
T T L H+ I L G
Sbjct: 336 TQTALNSF--HQPTIWLAG 352
>gi|374263517|ref|ZP_09622065.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Legionella
drancourtii LLAP12]
gi|363536107|gb|EHL29553.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Legionella
drancourtii LLAP12]
Length = 444
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 143/307 (46%), Gaps = 26/307 (8%)
Query: 18 LACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGN 77
L L +G V +++ A+ I ++A+TGTNGKSTV T VG+M G V GN
Sbjct: 82 LQYALHAGISVYGDIECLAREI--HAPVIAITGTNGKSTVTTLVGEMAKAAGYNVAVAGN 139
Query: 78 LGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK 137
+G P+ + + + ++ + V+E+SS+Q+++ + P V+ +LN++PDHL+RH
Sbjct: 140 IGMPV-------LDMLEDEHQYDLWVLELSSFQLDLTSS-LAPVVATILNVSPDHLDRHH 191
Query: 138 TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTA 197
+M Y K ++ H + + I+ F I+ E K
Sbjct: 192 SMDAYIRAKQRVYHHAQVVLFNRDDAYTEPAGQVIRAISFGNNQPATEDWGLINQEDKI- 250
Query: 198 SFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPH 257
A G L ++ + G HN+ NA A G+ + + S + H
Sbjct: 251 ---YLAHGNSCFLATESVLIKGVHNWLNALAACALADAA--GIPRQYIISVLTTFSGLSH 305
Query: 258 RMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGH---KCVILLGGQAKVLNGQESNGF 314
R Q V R + GV W++DSK TN+ AT + + + G + V++ GGQ K + F
Sbjct: 306 RCQWV-RTLDGVEWINDSKGTNIGATISAINGIGGSMQGRIVLIAGGQGKGAD------F 358
Query: 315 EKLIEPL 321
+L +P+
Sbjct: 359 SELAQPI 365
>gi|262404717|ref|ZP_06081272.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio sp. RC586]
gi|262349749|gb|EEY98887.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio sp. RC586]
Length = 440
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 154/329 (46%), Gaps = 63/329 (19%)
Query: 2 WML-WLFLLEFQLKATGLAC-------LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNG 53
W L WL + + G+A +L G V+ +++ A + + ++A+TG+NG
Sbjct: 61 WNLEWLLSADLVVTNPGIALATAEIQQVLAVGIPVVGDIELFAWHVDK--PVIAITGSNG 118
Query: 54 KSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEI 113
KSTV G + N G++A VGGN+G P AL P ++ V+E+SS+Q+E
Sbjct: 119 KSTVTDLSGVLANAAGVKAAVGGNIGVP---------ALDLISPDVELYVLELSSFQLET 169
Query: 114 PNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSH----MVNTK-----------L 158
+ + LNL+ DH++R++ M++Y K +F H +VN L
Sbjct: 170 TSSLKLKA-AAFLNLSEDHMDRYQGMEDYRQAKLRIFGHAETAVVNADDTQTFPDRAAHL 228
Query: 159 GLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVM 218
++ FG +H +F++A + EA A E + ++
Sbjct: 229 QVVTFGVEH------AAQFSVAQHQGREYLFAHDEAVMACDE--------------LSLV 268
Query: 219 GRHNYHN--AAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSK 276
GRHN N +A L G++ + ++AL S + HR Q+V D G+ WV+DSK
Sbjct: 269 GRHNVANVLTVLALLDSAGVNFRLALDALKSYTGL----THRCQVV-VDNHGIKWVNDSK 323
Query: 277 ATNLEATCTGLMDLKGH-KCVILLGGQAK 304
ATN+ +T L LK + +L+GG K
Sbjct: 324 ATNVASTLAALSGLKIEGQLYLLVGGVGK 352
>gi|121728372|ref|ZP_01681401.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
V52]
gi|147674702|ref|YP_001217905.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Vibrio
cholerae O395]
gi|262168384|ref|ZP_06036081.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
RC27]
gi|172047587|sp|A5F5N1.1|MURD_VIBC3 RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|121629363|gb|EAX61794.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
V52]
gi|146316585|gb|ABQ21124.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
O395]
gi|262023276|gb|EEY41980.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
RC27]
Length = 440
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 97/324 (29%), Positives = 151/324 (46%), Gaps = 53/324 (16%)
Query: 2 WML-WLFLLEFQLKATGLAC-------LLQSGKRVMSELD-FAAQVIPRSIKILAVTGTN 52
W L WL + + G+A +L +G V+ +++ FA V ++A+TG+N
Sbjct: 61 WNLEWLLNADLVVTNPGIALATPEIQQVLAAGIPVVGDIELFAWHV---DTPVIAITGSN 117
Query: 53 GKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQME 112
GKSTV G + N G++A VGGN+G P AL P ++ V+E+SS+Q+E
Sbjct: 118 GKSTVTDLSGVLANAAGVKAAVGGNIGVP---------ALDLISPDVELYVLELSSFQLE 168
Query: 113 IPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSH----MVNT-KLGLLPFGNQH 167
+ + LNL+ DH++R++ M +Y K +F H +VN P H
Sbjct: 169 TTSSLKL-KAAAFLNLSEDHMDRYQGMGDYRQAKLRIFDHAETAVVNADDTQTFPDHAAH 227
Query: 168 LNEAIKG----HRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNY 223
L G +F+LA + EA A E + ++GRHN
Sbjct: 228 LQVVTFGVEQAAQFSLAQHQGREYLFARDEAVMACAE--------------LSLVGRHNV 273
Query: 224 HN--AAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLE 281
N +A L G++ + ++AL S + HR Q+V D G+ WV+DSKATN+
Sbjct: 274 TNVLTVLALLDSAGVNFRLALDALKSYTGL----THRCQVV-ADNHGIKWVNDSKATNVA 328
Query: 282 ATCTGLMDLKGH-KCVILLGGQAK 304
+T L LK + +L+GG K
Sbjct: 329 STLAALSGLKIEGQLYLLVGGVGK 352
>gi|288958921|ref|YP_003449262.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Azospirillum sp.
B510]
gi|288911229|dbj|BAI72718.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Azospirillum sp.
B510]
Length = 473
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 90/286 (31%), Positives = 131/286 (45%), Gaps = 38/286 (13%)
Query: 41 RSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQ 100
R + +TGTNGKST T +G +L G +A VGGNLG P+ F I ++
Sbjct: 108 RDCAFIGITGTNGKSTTTTLIGHILAAAGRKAAVGGNLGTPV--LTFDPIGAGNA----- 160
Query: 101 VAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGL 160
V+E+SSYQ+E+ + ++V+LN+TPDHL RH M Y K +F + +
Sbjct: 161 -CVLEMSSYQLELTHS-ITFDIAVLLNITPDHLARHGGMDGYIAAKTLIFHRQTRPRTAV 218
Query: 161 LPFGNQHLNE--------------AIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGV 206
+ ++H + + H + A G +D E AV V
Sbjct: 219 IGVDDEHCRKIHAGLVAAGDQRIWPVSAHGPVAGGVYAADGWLVD------DTEGEAVRV 272
Query: 207 VSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDI 266
V L + +G HN+ NAA A + G+ A+ + + HR Q+V +
Sbjct: 273 VELSTLPTL--LGAHNWQNAAAAFAAC--KAAGIPAPAIVAAMASFPGLAHRQQLVGT-L 327
Query: 267 QGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKV--LNGQE 310
GV +V+DSKATN +AT L +LGGQAK LNG E
Sbjct: 328 DGVRFVNDSKATNADATEKALATFD--PIYWILGGQAKDTGLNGLE 371
>gi|357043585|ref|ZP_09105276.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Prevotella
histicola F0411]
gi|355368249|gb|EHG15670.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Prevotella
histicola F0411]
Length = 454
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 159/314 (50%), Gaps = 34/314 (10%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
L+ G ++SE++FA + + K++ +TG+NGK+T + + + + G + + GN+GN
Sbjct: 93 LIAQGTHIISEIEFAGRYT--NSKMICITGSNGKTTTTSLIYHIFKNAGYDVGLAGNIGN 150
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDHLERHK-T 138
L AL ++ ++E+SS+Q++ N Y F ++++LN+TPDHL+R+
Sbjct: 151 SL--------ALQVAESPHAYYIIELSSFQLD--NMYDFRANIAILLNITPDHLDRYDYK 200
Query: 139 MKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTAS 198
+NYA K + + TK + N + +F++ + +P ++ +
Sbjct: 201 FENYADAKMRIIQNQ--TKEDSFIYWNDDPVIRKELEKFDVHAV-CYPFSELKEKGSIGY 257
Query: 199 FEVPAVGVVS----QLQLHNMKVMGRHNYHNAAVAALSVLGLDI-GVDVEALNSTIEILR 253
E + ++ ++ + G+HN +N+ A ++ DI G+ E + ++
Sbjct: 258 IEEGQYTIEQPEPFNMEQEDLSLTGKHNIYNSLAAGIAS---DISGIKKENIRKSLSDFP 314
Query: 254 TPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNG 313
HR++ V + + GV +++DSKATN++A L ++ +++LGG+ K G + N
Sbjct: 315 GVEHRLEKVCK-VAGVQYINDSKATNVDACWYALESMRT-PTILILGGKDK---GNDYNA 369
Query: 314 FEKLIEPLNHHRCV 327
+ L++ +CV
Sbjct: 370 IKDLVK----KKCV 379
>gi|160880607|ref|YP_001559575.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Clostridium
phytofermentans ISDg]
gi|189082875|sp|A9KLU2.1|MURD_CLOPH RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|160429273|gb|ABX42836.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Clostridium
phytofermentans ISDg]
Length = 454
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 126/273 (46%), Gaps = 35/273 (12%)
Query: 44 KILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAV 103
KI A+TGTNGK++ T VG+++ FV GN+G P ++ + + V V
Sbjct: 110 KIAAITGTNGKTSTTTLVGEIMKTYYKSVFVVGNIGVPYTQ-------MVKNTENDSVTV 162
Query: 104 VEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPF 163
E+SS+Q+E F P VS +LN+TPDHL RH TM+ Y K ++ + +L +
Sbjct: 163 AEMSSFQLETIET-FRPDVSAILNITPDHLNRHHTMEAYIEAKVNITKNQTKEDTCILNY 221
Query: 164 GNQHLNEAIKGHRFNLAWIGAFPGVK------------IDTEAKTASFEVPAVGVVSQLQ 211
+ +L + W + ++ D E + +V
Sbjct: 222 EDSYLRTVSGRIPATILWFSSVRELERGLFLRENHIIYRDDEKECVVCDV---------- 271
Query: 212 LHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTW 271
+ ++++G+HNY N A + L + +D + + R HR++ V +GV +
Sbjct: 272 -NELQIIGKHNYENVMAAVGIAIALKVPMDF--IREAVTKFRGVEHRIEYVTTK-RGVKY 327
Query: 272 VDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
+DSK TN +A+ + ++ K +++ GG K
Sbjct: 328 YNDSKGTNPDASIQAIKAMQ-TKTLLIGGGYDK 359
>gi|417321317|ref|ZP_12107857.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Vibrio
parahaemolyticus 10329]
gi|328471997|gb|EGF42874.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Vibrio
parahaemolyticus 10329]
Length = 437
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 148/320 (46%), Gaps = 47/320 (14%)
Query: 18 LACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGN 77
+ +L G V+ +++ A + + + +A+TG+NGKSTV G M G+ VGGN
Sbjct: 85 IQTVLAKGTPVVGDIELFAWAVNKPV--VAITGSNGKSTVTDLTGVMAKAAGLTVGVGGN 142
Query: 78 LGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK 137
+G P AL + + V+E+SS+Q+E + + LNL+ DH++R++
Sbjct: 143 IGVP---------ALELLEQDADLYVLELSSFQLETTSSLKL-NAAAFLNLSEDHMDRYE 192
Query: 138 TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTA 197
M +Y K +F N +L ++ +Q ++ P V ++ +
Sbjct: 193 GMADYRAAKLRIFD---NAELAVVNRDDQETYPEVE-----------MPVVTFGSDEQAY 238
Query: 198 SFEVPAVGVVSQLQLH--------NMKVMGRHNYHNAAV--AALSVLGLDIGVDVEALNS 247
EV G + L H +K++G+HN NA V A L G+D + AL +
Sbjct: 239 GLEVD--GSRTWLLDHGQRVIASDELKLVGKHNLANALVVLALLKAAGVDYHNALNALKN 296
Query: 248 TIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGH-KCVILLGGQAKVL 306
+ HR Q+V D +GV WV+DSKATN+ +T L L+ K +L+GG K
Sbjct: 297 YTGL----THRCQVV-ADNRGVKWVNDSKATNIASTMAALSGLESTGKLYLLVGGVGK-- 349
Query: 307 NGQESNGFEKLIEPLNHHRC 326
G + + + LN C
Sbjct: 350 -GADFTPLKPIFATLNLQLC 368
>gi|312959055|ref|ZP_07773574.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Pseudomonas
fluorescens WH6]
gi|311286825|gb|EFQ65387.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Pseudomonas
fluorescens WH6]
Length = 448
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 91/295 (30%), Positives = 144/295 (48%), Gaps = 40/295 (13%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+A++G+N KSTV T VG+M G VGGNLG P AL + ++ V+
Sbjct: 111 IVAISGSNAKSTVTTLVGEMAVAAGKRVAVGGNLGTP---------ALDLLSDEVELYVM 161
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLF----SHMVNTKLGL 160
E+SS+Q+E + V+ VLN++ DH++R+ + Y L K +F +VN + L
Sbjct: 162 ELSSFQLETTHD-LGAEVATVLNVSEDHMDRYSGLPAYHLAKHRIFRGAKQFVVNRQDAL 220
Query: 161 LPFGNQHLNEAIKGHRFNLAW--IGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVM 218
+ E + F L AF G++ + K +FE + + + +K+
Sbjct: 221 ---SRPLIGEGMPCWTFGLGKPDFKAF-GIREENGEKYLAFEFQNL-----MPVRELKIR 271
Query: 219 GRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKAT 278
G HN NA A LG +G+ +A+ S++ HR Q V RD+ GV++ +DSKAT
Sbjct: 272 GAHNQSNALAA--LALGHAVGLPFDAMLSSLRAFGGLEHRCQWV-RDLDGVSYYNDSKAT 328
Query: 279 NLEATCTGL----MDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPLNHH-RCVI 328
N+ A + D+ G K V++ GG K + F+ L P+ H R V+
Sbjct: 329 NVGAALAAIEGLGADIDG-KLVLIAGGDGKGAD------FKDLKAPVAEHCRAVV 376
>gi|374340110|ref|YP_005096846.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Marinitoga
piezophila KA3]
gi|372101644|gb|AEX85548.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Marinitoga
piezophila KA3]
Length = 432
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 138/289 (47%), Gaps = 33/289 (11%)
Query: 21 LLQSGKRVMSELDFAAQVI----PRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGG 76
L S ++ +E++FA I P ++ + VTGTNGKST G +L+ FV G
Sbjct: 80 LKTSNIKISTEIEFAWNYIKKHNPEAV-FVGVTGTNGKSTTTQLTGHILSST-YNTFVCG 137
Query: 77 NLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERH 136
N+G PLS A P K ++ VVEVSS+Q+ F P +SV+LNL PDHL H
Sbjct: 138 NIGTPLSSA-------PLDK---EIYVVEVSSFQL-FWGSTFTPEISVLLNLMPDHLNWH 186
Query: 137 KTMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKT 196
+++ Y TK ++ K ++ G +N ++G+ NL I F G + K
Sbjct: 187 SSLEEYYNTKINM------VKRTVMGNGMAFVNANLRGYFDNLQRIVLF-GENGNIVWKN 239
Query: 197 ASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSV-LGLDIGVDVEALNSTIEILRTP 255
E + + ++N+ + Y +AA+ V L LDI +V + I +T
Sbjct: 240 NMIEAGNIVI----NINNLSLQFEL-YQEDVMAAVGVALNLDISKNV--IEEFISTFKTL 292
Query: 256 PHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
HR++ + + G+ + +DSKATN A + + + +L G K
Sbjct: 293 EHRLEFIE-EYNGIRFFNDSKATNAHAAYSAYKSFRNKGYIAMLSGIPK 340
>gi|338536724|ref|YP_004670058.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Myxococcus fulvus
HW-1]
gi|337262820|gb|AEI68980.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Myxococcus fulvus
HW-1]
Length = 455
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 137/295 (46%), Gaps = 36/295 (12%)
Query: 24 SGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLS 83
+G V E++ A +V+ + + +TGTNGKST G + FVGGNLG P S
Sbjct: 93 AGVAVWGEVELAGRVLA-GVPLFGITGTNGKSTTTALTGALFAAGDKRTFVGGNLGRPFS 151
Query: 84 EAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYA 143
EAA S + VVE+SSYQ+E + P + +LNLTPDH++R+ + Y
Sbjct: 152 EAAM-------SPEAWDALVVELSSYQLE-GIRALRPRGAAILNLTPDHIDRYPSHAAYG 203
Query: 144 LTKCHLFSHMVNTKLGLLPFGNQH------LNEAIKGHRFNLAWIG-------AFPGVKI 190
K +F +N + G N L A K + + G A G+ +
Sbjct: 204 EAKARIF---LNQQAGDFAVVNADDADVLGLARAAKASVYGFSLTGEPVADAPALAGLAV 260
Query: 191 DTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSV-LGLDIGVDVEALNSTI 249
A+ F + +G L N + G HN NA AAL LG GV A+ + +
Sbjct: 261 ---AEPGGFRLEFLG--EHYTLTNRALRGAHNAQNAMAAALLARLG---GVASGAVQAGL 312
Query: 250 EILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
+ PHR++ V R + GV WV+DSKATN+++ L ++ GG+ K
Sbjct: 313 DGYPGLPHRLESV-RVLDGVEWVNDSKATNVDSVLVALRAFS-SGVWLIAGGKGK 365
>gi|385854586|ref|YP_005901099.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis M01-240355]
gi|421549976|ref|ZP_15995983.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis 69166]
gi|433470744|ref|ZP_20428141.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis 68094]
gi|433477001|ref|ZP_20434327.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis 70012]
gi|433525433|ref|ZP_20482074.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis 69096]
gi|433538175|ref|ZP_20494660.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis 70030]
gi|325203527|gb|ADY98980.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis M01-240355]
gi|402330890|gb|EJU66233.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis 69166]
gi|432211420|gb|ELK67373.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis 68094]
gi|432216922|gb|ELK72794.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis 70012]
gi|432263029|gb|ELL18258.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis 69096]
gi|432275500|gb|ELL30571.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis 70030]
Length = 445
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 140/289 (48%), Gaps = 30/289 (10%)
Query: 23 QSGKRVMSELDFAAQVI-PRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
Q+G RV+ +++ A ++ R K++A+TG+NGK+TV + VG + G++ + GN+G P
Sbjct: 89 QNGGRVLGDIELLADIVNRRGDKVIAITGSNGKTTVTSLVGYLCIKCGLDTVIAGNIGTP 148
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
+ EA L K V V+E+SS+Q+E + PT + VLN++ DHL+R+ + +
Sbjct: 149 VLEA-----ELQREGKKADVWVLELSSFQLE-NTESLRPTAATVLNISEDHLDRYDDLLD 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNE------AIKGHRFNLAWIGAFPGVKIDTEAK 195
YA TK +F G Q LN A+K + W E +
Sbjct: 203 YAHTKDKIFRGD----------GVQVLNADDTFCCAMKRAGREVKWFSLEHEADFWLERE 252
Query: 196 TASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTP 255
T + G + ++ + G H + A V A L +G+ L ++ +
Sbjct: 253 TGRLK---QGNEDLIATQDIPLQGLH--NAANVMAAVALCEAVGLPRNELLEHVKTFQGL 307
Query: 256 PHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
PHR++ + GV ++DDSK TN+ AT + L+ + ++LGG K
Sbjct: 308 PHRVEKIGEK-NGVVFIDDSKGTNVGATAAAIAGLQ-NPLFVILGGMGK 354
>gi|386080668|ref|YP_005994193.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase MurD [Pantoea
ananatis PA13]
gi|354989849|gb|AER33973.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase MurD [Pantoea
ananatis PA13]
Length = 438
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 137/283 (48%), Gaps = 63/283 (22%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+A+TG+NGKSTV T VG+M G + VGGN+G P AL K Q+ V+
Sbjct: 107 IVAITGSNGKSTVTTLVGEMAKAAGWQVGVGGNIGLP---------ALSLLKAPAQLYVL 157
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK-TMKNYALTKCHLFSH----MVNTKLG 159
E+SS+Q+E + + +LN+T DH++R+ M+ Y K ++ + +VN G
Sbjct: 158 ELSSFQLETTHS-LKAAAATILNVTEDHMDRYPLGMQQYRAAKLRIYENAQVCVVNADDG 216
Query: 160 L---------------LPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAV 204
+ + G+ HLN+ + W+ A G K+
Sbjct: 217 MTMPVRGADARCVSFGIDIGDYHLNK-----QQGSIWLRA-KGEKV-------------- 256
Query: 205 GVVSQLQLHNMKVMGRHNYHN--AAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIV 262
L M ++G+HNY N AA+A +GL + AL + + PHR Q+V
Sbjct: 257 -----LNTDEMTLVGQHNYTNALAALALADAVGLPRSTSLSALAAYSGL----PHRFQLV 307
Query: 263 HRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCV-ILLGGQAK 304
H+ +GV W++DSKATN+ +T L L+ + + +LLGG K
Sbjct: 308 HQS-RGVRWINDSKATNVGSTEAALKGLQVNGTLWLLLGGDGK 349
>gi|410030909|ref|ZP_11280739.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Marinilabilia sp.
AK2]
Length = 450
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 136/273 (49%), Gaps = 25/273 (9%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
+ G V+ EL+FA + K++A+TGTNGK+T +L G++ + GN+G
Sbjct: 84 FEKGLPVIDELEFAFRF--SKGKVIAITGTNGKTTTALLTYHLLKKGGLDVGLAGNVGKS 141
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK-TMK 140
A + V+EVSS+Q++ K+F P ++++ N+TPDHL+R+ +
Sbjct: 142 W---AGQLVG-----QDHDWWVLEVSSFQID-GFKHFKPCIAMLTNITPDHLDRYGYQLD 192
Query: 141 NYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASF- 199
NY L+K LF +M + ++ + NE I F + +P V + T K +
Sbjct: 193 NYILSKMSLFQNMDLDQAAIINADDLLTNEGI---SFKPLTMDCYP-VSLKTSQKQGGYF 248
Query: 200 -----EVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRT 254
++ A G + + + G+HN N+ +A L + GV+ +A+ ++ +
Sbjct: 249 DGLNLDMIAKGKKISISHQEVILKGKHNMLNSMMATLGA--ILAGVEEKAIREGLQDFKN 306
Query: 255 PPHRMQIVHRDIQGVTWVDDSKATNLEATCTGL 287
HRM+ V I GV +V+DSK TN++AT L
Sbjct: 307 AAHRMEAVAT-IHGVAFVNDSKGTNVDATAYAL 338
>gi|340399080|ref|YP_004728105.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
salivarius CCHSS3]
gi|338743073|emb|CCB93581.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase
(UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase)
(D-glutamic acid-adding enzyme) [Streptococcus
salivarius CCHSS3]
Length = 450
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 92/308 (29%), Positives = 144/308 (46%), Gaps = 37/308 (12%)
Query: 18 LACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGN 77
+A L+ G V +E++ A V I+ +TG+NGK+T T + +LNH G + GN
Sbjct: 89 VARALEKGIPVWTEVELAYLV--SEAPIIGITGSNGKTTTTTMIADVLNHGGKSGVLSGN 146
Query: 78 LGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK 137
+G P SE A A + V+E+SS+Q+ + F P ++V+ NL P H++ H
Sbjct: 147 IGFPASEVAQSVTAQ-------DILVMELSSFQL-MGIDSFHPHIAVITNLMPTHIDYHG 198
Query: 138 TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGV-KIDTEAKT 196
+ + Y K ++ + M +L F NQ L + + A + F V K+D
Sbjct: 199 SFEEYVAAKWNIQNQMTADDFVVLNF-NQDLAKELATQ--TKAQVVPFSTVEKVD----G 251
Query: 197 ASFEVPAVGVVSQL--QLHNMKVMGRHNYHNA----AVAALSVLGLDIGVDVEALNSTIE 250
A E + +L Q + V G HN NA AVA LS G+ +A+ T+
Sbjct: 252 AYLENGGLYFKGELVMQADEIGVPGSHNVENALATIAVAKLS------GISNQAIKETLA 305
Query: 251 ILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQE 310
HR+Q V I V + +DSK+TN+ AT L K +++ GG +
Sbjct: 306 SFGGVKHRLQFVDT-INEVRFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------ 358
Query: 311 SNGFEKLI 318
N F++LI
Sbjct: 359 GNEFDELI 366
>gi|335029375|ref|ZP_08522882.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
infantis SK1076]
gi|334268672|gb|EGL87104.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
infantis SK1076]
Length = 450
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 145/300 (48%), Gaps = 29/300 (9%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L+ G V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LKKGIPVLTEVELAYLI--SEAPIVGITGSNGKTTTTTMIGEVLTAAGQNGLLSGNIGYP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A + V+E+SS+Q+ + + F P ++V+ NL P H++ H + +
Sbjct: 151 ASQVA-------QTATDKDTLVMELSSFQL-MGIQEFHPEIAVITNLMPTHIDYHGSFEA 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDT---EAKTAS 198
Y K ++ S+M +L F NQ L + + + N + K+D E
Sbjct: 203 YVEAKWNIQSNMTAADYLVLNF-NQELAKEL-ATKTNATVVPFSTLEKVDGVYLEGGYLY 260
Query: 199 FEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHR 258
F V + + V G HN N A+A ++V L GVD E + T+ HR
Sbjct: 261 FRGEKV-----MAADEIGVPGSHNVEN-ALATIAVAKLR-GVDNETIKETLSAFGGVKHR 313
Query: 259 MQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
+Q V +I+GV + +DSK+TN+ AT L K +++ GG + N F++L+
Sbjct: 314 LQFVD-EIKGVKFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------GNEFDELV 366
>gi|386014663|ref|YP_005932940.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase MurD [Pantoea
ananatis AJ13355]
gi|327392722|dbj|BAK10144.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase MurD [Pantoea
ananatis AJ13355]
Length = 438
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 137/283 (48%), Gaps = 63/283 (22%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+A+TG+NGKSTV T VG+M G + VGGN+G P AL K Q+ V+
Sbjct: 107 IVAITGSNGKSTVTTLVGEMAKAAGWQVGVGGNIGLP---------ALSLLKAPAQLYVL 157
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK-TMKNYALTKCHLFSH----MVNTKLG 159
E+SS+Q+E + + +LN+T DH++R+ M+ Y K ++ + +VN G
Sbjct: 158 ELSSFQLETTHS-LKAAAATILNVTEDHMDRYPLGMQQYRAAKLRIYENAQVCVVNADDG 216
Query: 160 L---------------LPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAV 204
+ + G+ HLN+ + W+ A G K+
Sbjct: 217 MTMPVRGADARCVSFGIDIGDYHLNK-----QQGSIWLRA-KGEKV-------------- 256
Query: 205 GVVSQLQLHNMKVMGRHNYHN--AAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIV 262
L M ++G+HNY N AA+A +GL + AL + + PHR Q+V
Sbjct: 257 -----LNTDEMTLVGQHNYTNALAALALADAVGLPRSTSLSALAAYSGL----PHRFQLV 307
Query: 263 HRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCV-ILLGGQAK 304
H+ +GV W++DSKATN+ +T L L+ + + +LLGG K
Sbjct: 308 HQS-RGVRWINDSKATNVGSTEAALKGLEVNGTLWLLLGGDGK 349
>gi|296125387|ref|YP_003632639.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Brachyspira
murdochii DSM 12563]
gi|296017203|gb|ADG70440.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Brachyspira
murdochii DSM 12563]
Length = 471
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 143/289 (49%), Gaps = 26/289 (8%)
Query: 23 QSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPL 82
+ G +++ E++FA ++P +AVTGT+GK+T VT + ++++ +A + GN+GN
Sbjct: 107 RRGIKIIGEIEFAYNLLPNR-NYIAVTGTDGKTTTVTLIYKIISSYK-KARLVGNVGNTF 164
Query: 83 SEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNY 142
S+ L + +P + V+E+SS+Q+E K F ++ +LN+ DHL+R+K ++ Y
Sbjct: 165 SKE------LETIEPDEDI-VLELSSFQLETVEK-FHAHIAAILNIAEDHLDRYKDIEEY 216
Query: 143 ALTKCHLFSHMVNTKLGLLPFGN-------QHLNEAIKGHRFNLAWIGAFPGVKIDTEAK 195
K ++ + +L + N LN K + F + + E +
Sbjct: 217 FNAKKNISINQNKNDFLILNYDNIYTNIWYNELNNNCKMKLLTFSLKSKFADIYYNEEDE 276
Query: 196 TASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTP 255
+E + + K++G+HN N A L L +I E + + +
Sbjct: 277 YIYYENEKL-----FSIKERKILGKHNVANILAAVLVCLKDNIPA--EHIEHVVNNFKGI 329
Query: 256 PHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
HR+++V +I GV +++DSKAT++ A + L ++++GG+ K
Sbjct: 330 EHRVELV-AEINGVKYINDSKATSMNAVMSALKSF-DKDIILIMGGRNK 376
>gi|400287372|ref|ZP_10789404.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Psychrobacter
sp. PAMC 21119]
Length = 471
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 135/281 (48%), Gaps = 44/281 (15%)
Query: 42 SIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQV 101
++ I+A+TG+N KSTV T VGQM G+ VGGN+G P A + +A P Q+
Sbjct: 114 TVPIVAITGSNAKSTVTTLVGQMAADAGVNVGVGGNIGVP----ALNLLA----NPDMQL 165
Query: 102 AVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLF----SHMVNTK 157
AV+E+SS+Q+E V+ VLN++PDHL+RH M Y K +F S ++N +
Sbjct: 166 AVLELSSFQLETVTN-LGAQVATVLNMSPDHLDRHGDMLGYHQAKHRIFQGAKSVVINRE 224
Query: 158 LGL--------LPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQ 209
L LP + ++ KGH G+ D E + A G
Sbjct: 225 DALTRPLVADNLPRLSTGIHAPDKGHY----------GLITDPEGQI----YLARGTERL 270
Query: 210 LQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGV 269
L +++ GRHN A LG G+ ++++ +T++ HR Q V G+
Sbjct: 271 LSADKLQIKGRHN--LLNAQAALALGELAGLPLDSMLNTLQQFTGLEHRCQYVAT-AAGL 327
Query: 270 TWVDDSKATNLEATCTGLMDL------KGHKCVILLGGQAK 304
+ +DSK TN+ +T + L K K +++LGGQ K
Sbjct: 328 DYFNDSKGTNIGSTMAAIEGLGAVYAPKDGKLLLILGGQGK 368
>gi|399154390|ref|ZP_10754457.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [gamma
proteobacterium SCGC AAA007-O20]
Length = 438
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 135/270 (50%), Gaps = 37/270 (13%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+ +TG+NGKSTV +G+M G A + GN+G P+ E S + ++ VV
Sbjct: 103 IVGITGSNGKSTVTQLLGEMAIGSGKNAVICGNIGKPVME---------SLSDEAELYVV 153
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFG 164
E+SSYQ++ N T VV N++PDHL+R+ Y +K L+ + + + L
Sbjct: 154 EMSSYQLDYTNNLNLLT-GVVTNISPDHLDRYPNYDIYIASKLKLYEYCQYSVVNL---- 208
Query: 165 NQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQ--------LQLHNMK 216
N+ L + IKG + I+ ++ F VG + + ++
Sbjct: 209 NEPLVKGIKGDSY----------YAIEEATQSCEFSAKKVGGIYTIYQGKNILMTSDDLI 258
Query: 217 VMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSK 276
V+G+HN N +AALS LG G+ V+ + + PHR++ V ++ GV + ++SK
Sbjct: 259 VVGQHNVEN-VLAALS-LGQQAGLSVQEMIQVAKSFTGLPHRLEWVA-NLSGVDYFNNSK 315
Query: 277 ATNLEATCTGLMDLKG-HKCVILL-GGQAK 304
+TN +T T + L +K ++L+ GG AK
Sbjct: 316 STNAISTITAIEALSDRYKSIVLIAGGIAK 345
>gi|433521205|ref|ZP_20477905.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis 61103]
gi|432262243|gb|ELL17487.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neisseria
meningitidis 61103]
Length = 445
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 140/289 (48%), Gaps = 30/289 (10%)
Query: 23 QSGKRVMSELDFAAQVI-PRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
Q+G RV+ +++ A ++ R K++A+TG+NGK+TV + VG + G++ + GN+G P
Sbjct: 89 QNGGRVLGDIELLADIVNRRGDKVIAITGSNGKTTVTSLVGYLCIKCGLDTVIAGNIGTP 148
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
+ EA L K V V+E+SS+Q+E + PT + VLN++ DHL+R+ + +
Sbjct: 149 VLEA-----ELQREGKKADVWVLELSSFQLE-NTESLRPTAATVLNISEDHLDRYDDLLD 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNE------AIKGHRFNLAWIGAFPGVKIDTEAK 195
YA TK +F G Q LN A+K + W E +
Sbjct: 203 YAHTKDKIFRGD----------GVQVLNADDTFCCAMKRAGREVKWFSLEHEADFWLERE 252
Query: 196 TASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTP 255
T + G + ++ + G H + A V A L +G+ L ++ +
Sbjct: 253 TGRLK---QGNEDLIATQDIPLQGLH--NAANVMAAVALCEAVGLPRNELLEHVKTFQGL 307
Query: 256 PHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
PHR++ + GV ++DDSK TN+ AT + L+ + ++LGG K
Sbjct: 308 PHRVEKIGEK-NGVVFIDDSKGTNVGATAAAIAGLQ-NPLFVILGGMGK 354
>gi|417698122|ref|ZP_12347295.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA41317]
gi|419452867|ref|ZP_13992841.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae EU-NP03]
gi|419505641|ref|ZP_14045302.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA49194]
gi|332202563|gb|EGJ16632.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA41317]
gi|379607555|gb|EHZ72301.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA49194]
gi|379627451|gb|EHZ92063.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae EU-NP03]
Length = 450
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 148/297 (49%), Gaps = 23/297 (7%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L G V++E++ A +I ++ I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LVKGIPVLTEVELA-YLISEAL-IIGITGSNGKTTTTTMIGEVLTAAGQHGLLSGNIGYP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A + S K V+E+SS+Q+ + + F P ++V+ NL P H++ H
Sbjct: 151 ASQVA----QIASDKDTL---VMELSSFQL-MGVQEFHPEIAVITNLMPTHIDYHGAFSE 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEV 201
Y K ++ + M +L F NQ L + + A + F ++ A ++
Sbjct: 203 YVAAKWNIQNKMTAADFLVLNF-NQDLAKDLASK--TEATVVPFSTLEKVDGAYLEDGQL 259
Query: 202 PAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQI 261
G V + + + V G HN N A+A ++V L GVD + + T+ HR+Q
Sbjct: 260 YFRGEVV-MAANEIGVPGSHNVEN-ALATIAVAKLR-GVDNQTIKETLSAFGGVKHRLQF 316
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
V DI+GV + +DSK+TN+ AT L K V++ GG + N F++L+
Sbjct: 317 VD-DIKGVKFYNDSKSTNILATQKALSGFDNSKVVLIAGGLDR------GNEFDELV 366
>gi|340753370|ref|ZP_08690156.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Fusobacterium sp.
2_1_31]
gi|229422962|gb|EEO38009.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Fusobacterium sp.
2_1_31]
Length = 432
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 149/315 (47%), Gaps = 47/315 (14%)
Query: 9 LEFQLKATGLAC------LLQSGKRVMSELDFAAQVIPRS---IKILAVTGTNGKSTVVT 59
+EF +K+ G+ + + G +V+ E++ A + KI+A+TGTNGKST
Sbjct: 48 IEFFIKSPGIPYNDFVKEVQKRGIKVLDEIEVAYNYMVEKNLKTKIIAITGTNGKSTTTA 107
Query: 60 FVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQME-IPNKYF 118
+ +LNH G +A GN+G LSEA H + +E+SS+Q+E + N F
Sbjct: 108 KISDLLNHAGYKACYAGNIGRSLSEALLH-------EKDLDFVSLELSSFQLENVEN--F 158
Query: 119 CPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFGNQHLN---EAIKGH 175
P +S+++N+ PDH+ER+K+ Y TK ++ + + + + + + IK
Sbjct: 159 RPYISMIINMGPDHIERYKSFDEYYDTKFNIAKNQNENQYFIENIDDVEIEKRAKQIKAK 218
Query: 176 RFNLAWIGAFPGVKIDTEAKTASFEVPA----VGVVSQLQLHNMKVMGRHNYHNA--AVA 229
R ++ +++K A+ V VG ++ + + G HN N VA
Sbjct: 219 RISV------------SKSKEANVYVEDNKIYVGKDFIIEADKLSLKGIHNLENTLFMVA 266
Query: 230 ALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMD 289
+L +D E L + + HR ++ + V +++DSKATN+++T +
Sbjct: 267 TAEIL----NIDREKLKEFLMVATPLEHRTELFF-NYGKVKFINDSKATNVDSTKFAIQA 321
Query: 290 LKGHKCVILLGGQAK 304
K +++ GG K
Sbjct: 322 NKD--SILICGGYDK 334
>gi|444921777|ref|ZP_21241608.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Wohlfahrtiimonas
chitiniclastica SH04]
gi|444507155|gb|ELV07336.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Wohlfahrtiimonas
chitiniclastica SH04]
Length = 458
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 137/284 (48%), Gaps = 26/284 (9%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+ +TGTNGKSTV T V +L FVGGNLG P A P + V+
Sbjct: 113 IVGITGTNGKSTVTTLVADILEKDDRAVFVGGNLGEPALNLWLAAKAQGICDPLY---VL 169
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFG 164
E+SS+Q+E ++ TV+ +LNL PDHL+R++ +YA +K L HM K ++
Sbjct: 170 ELSSFQLET-TEHLDVTVAAILNLAPDHLDRYRDFDHYAHSKFKLL-HMA--KQSVVNVD 225
Query: 165 NQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFE----VPAVGVVSQLQLH--NMKVM 218
+ +L + + + + +A T + +PA + +H ++ +
Sbjct: 226 DTYLMDYVAHQSLSTI------TFSLKNDAATWHMQWQNNLPAAITNGDINIHLTDISLG 279
Query: 219 GRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKAT 278
G HNY N +AA ++ L +GV AL I + PHR +V + GV + +DSKAT
Sbjct: 280 GLHNYAN-VMAACAITQL-LGVKEAALRDAILHYQALPHRCALVAV-MDGVRYYNDSKAT 336
Query: 279 NLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPLN 322
NL +T + K +IL G V Q+ + + L++ N
Sbjct: 337 NLPSTVAAIEGFLEPKWLILGG----VTKDQDFSELQTLLDDDN 376
>gi|114777864|ref|ZP_01452795.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Mariprofundus
ferrooxydans PV-1]
gi|114551855|gb|EAU54395.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Mariprofundus
ferrooxydans PV-1]
Length = 455
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 130/278 (46%), Gaps = 28/278 (10%)
Query: 44 KILAVTGTNGKSTVVTFVGQMLNHL--GIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQV 101
I+AVTGTNGK+T V+ + ML+ L GIEA GGN+G P+ E L + +
Sbjct: 107 DIIAVTGTNGKTTTVSLISTMLDTLPGGIEA--GGNIGKPMLE-------LIADGDVPER 157
Query: 102 AVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLL 161
V+E+SS+Q+E P +V+LN+ PDH + H M+ Y K LF+ L
Sbjct: 158 VVLELSSFQLERAEPIH-PRWAVLLNVQPDHADMHVDMQAYRAAKLRLFARQGEGDKATL 216
Query: 162 PFGNQHLNEAIKGHRFNLAWIGAFP---------GVKIDTEAKTASFEVPAVGVVSQLQL 212
P G+ ++ R A++ F GV++ TE V +
Sbjct: 217 P-GDAEWDDLAAELRGRGAYVRRFGVGSAESLDCGVQM-TEQGAWELFWHHFDTVYTIDA 274
Query: 213 HNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWV 272
++ GRH + N AVA + D G+ + ++ R HR+Q + ++QG W
Sbjct: 275 SQLQTRGRHQHLNLAVAGQAA--ADFGLSPAVIRQSLTSFRGLQHRLQSLG-EVQGRQWF 331
Query: 273 DDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQE 310
+DSKATN +A L + + + + GG K L+ E
Sbjct: 332 NDSKATNPDAARAALESFE--QVIWVCGGLRKGLDVSE 367
>gi|408483717|ref|ZP_11189936.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Pseudomonas
sp. R81]
Length = 448
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 91/295 (30%), Positives = 143/295 (48%), Gaps = 40/295 (13%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+A++G+N KSTV T VG+M G VGGNLG P AL ++ V+
Sbjct: 111 IVAISGSNAKSTVTTLVGEMAAAAGKRVAVGGNLGTP---------ALDLLSDDVELYVM 161
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSH----MVNTKLGL 160
E+SS+Q+E + V+ VLN++ DH++R+ + Y L K +F +VN + L
Sbjct: 162 ELSSFQLETTHD-LGAEVATVLNVSEDHMDRYSGLPAYHLAKHRIFRGAKQVVVNRQDAL 220
Query: 161 LPFGNQHLNEAIKGHRFNLAW--IGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVM 218
+ E + F L AF G++ + K +FE + + + +K+
Sbjct: 221 ---SRPLMGEGLPCWTFGLGKPDFKAF-GIREENGEKYLAFEFQNL-----MPVRELKIR 271
Query: 219 GRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKAT 278
G HN NA A LG +G+ +A+ S + HR Q V RD+ GV++ +DSKAT
Sbjct: 272 GAHNQSNALAA--LALGHAVGLPFDAMLSALRTFGGLEHRCQWV-RDLDGVSYYNDSKAT 328
Query: 279 NLEATCTGL----MDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPLNHH-RCVI 328
N+ A + D++G K V++ GG K + F+ L P+ H R V+
Sbjct: 329 NVGAALAAIEGLGADIEG-KLVLIAGGDGKGAD------FKDLKGPVAEHCRAVV 376
>gi|423281159|ref|ZP_17260070.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides
fragilis HMW 610]
gi|424665904|ref|ZP_18102940.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides
fragilis HMW 616]
gi|404574157|gb|EKA78908.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides
fragilis HMW 616]
gi|404583323|gb|EKA88004.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides
fragilis HMW 610]
Length = 444
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 151/307 (49%), Gaps = 34/307 (11%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
L + G ++SE++FA + K++ +TG+NGK+T + + + G+ + GN+G
Sbjct: 82 LKEQGTPIISEIEFAGRYT--DAKMICITGSNGKTTTTSLIYHIFKSAGLNVGLAGNIGK 139
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDHLERHK-T 138
L AL ++ + V+E+SS+Q++ N Y F ++V++N+TPDHL+R+
Sbjct: 140 SL--------ALQVAEEEHDYYVIELSSFQLD--NMYKFRADIAVLMNITPDHLDRYDHC 189
Query: 139 MKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGA--FPGVKIDTEAKT 196
M+NY K + + T F N ++ I + I A +P I E
Sbjct: 190 MQNYINAKFRITQN--QTSEDAFIFWN---DDPIIKRELDKHGICAHLYPFSAIKEEGSI 244
Query: 197 ASFE----VPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSV-LGLDIGVDVEALNSTIEI 251
A E V + ++ + + G+HN +N+ A +S L G+ E + +
Sbjct: 245 AYVEDHEVVITAPIAFNMEQEQLALTGQHNLYNSLAAGISANLA---GITKENIRRALSD 301
Query: 252 LRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQES 311
+ HR++ V R ++G+ +++DSKATN+ + L + K V++LGG+ K G +
Sbjct: 302 FQGVEHRLEKVAR-VRGIDFINDSKATNVNSCWYALQSMTT-KTVLILGGKDK---GNDY 356
Query: 312 NGFEKLI 318
E+L+
Sbjct: 357 TEIEELV 363
>gi|378952681|ref|YP_005210169.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Pseudomonas
fluorescens F113]
gi|359762695|gb|AEV64774.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Pseudomonas
fluorescens F113]
Length = 448
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 137/289 (47%), Gaps = 43/289 (14%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+A++G+N KSTV T VG+M G VGGNLG P AL + ++ V+
Sbjct: 111 IVAISGSNAKSTVTTLVGEMAAAAGKRVAVGGNLGTP---------ALDLLSDEVELYVM 161
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFG 164
E+SS+Q+E + + V+ VLN++ DH++R+ + Y HL H + + F
Sbjct: 162 ELSSFQLETTD-HLGAEVATVLNVSEDHMDRYSGLPAY-----HLAKHRIFRGARQVVFN 215
Query: 165 NQH------LNEAIKGHRFNLAWIGAFPGVKIDTE--AKTASFEVPAVGVVSQLQLHNMK 216
Q L E + F L + F G + E K +FE + + + +K
Sbjct: 216 RQDALTRPLLGEGMPCWSFGLG-VPDFKGFGLREENGEKYLAFEFQNL-----MPVRELK 269
Query: 217 VMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSK 276
+ G HN A A LG +G+ +A+ S + HR Q V RD+ GV W +DSK
Sbjct: 270 IRGAHN--QANALAALALGHAVGLPFDAMLSALRTFAGLEHRCQWV-RDLDGVAWYNDSK 326
Query: 277 ATNLEATCTGL----MDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPL 321
ATN+ A + D++G K V++ GG K + F+ L +P+
Sbjct: 327 ATNVGAALAAIEGLGADIEG-KLVLIAGGDGKGAD------FKDLRDPV 368
>gi|350530213|ref|ZP_08909154.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Vibrio
rotiferianus DAT722]
Length = 437
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 148/325 (45%), Gaps = 57/325 (17%)
Query: 18 LACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGN 77
+ +L G +V+ +++ A ++ + + +A+TG+NGKSTV G M G+ VGGN
Sbjct: 85 IQAVLAKGTQVVGDIELFAWIVDKPV--IAITGSNGKSTVTDLTGVMAKAAGLTVGVGGN 142
Query: 78 LGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK 137
+G P AL + + V+E+SS+Q+E + + LNL+ DH++R+
Sbjct: 143 IGVP---------ALDLLEQDADLYVLELSSFQLETTSSLKLK-AAAFLNLSEDHMDRYD 192
Query: 138 TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTA 197
M +Y K +F N +L ++ +Q FP V D T
Sbjct: 193 GMADYRQAKLRIFD---NAELAIVNRDDQE----------------TFPDV--DMPIVTF 231
Query: 198 SFEVPAVGVVSQLQL-----HNMKVM--------GRHNYHNAAV--AALSVLGLDIGVDV 242
+ A G+ S Q H +V+ G+HN NA V A L G+D
Sbjct: 232 GCDDQAYGLESDGQRTWLLDHGQRVIASDELMLVGKHNLANALVVLALLKAAGVDY---Y 288
Query: 243 EALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGH-KCVILLGG 301
ALN+ ++ HR Q+V D +GV WV+DSKATN+ +T L L+ K +L+GG
Sbjct: 289 NALNA-LKTYTGLTHRCQVV-ADNRGVKWVNDSKATNIASTMAALSGLESTGKLYLLVGG 346
Query: 302 QAKVLNGQESNGFEKLIEPLNHHRC 326
K G + + + LN C
Sbjct: 347 VGK---GADFTPLKPIFATLNLQLC 368
>gi|300857279|ref|YP_003782263.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Clostridium
ljungdahlii DSM 13528]
gi|300437394|gb|ADK17161.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Clostridium
ljungdahlii DSM 13528]
Length = 458
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 146/297 (49%), Gaps = 34/297 (11%)
Query: 12 QLKATGLACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIE 71
++ + L Q+G V SE++ + P KI VTG++GK+T T + ML G +
Sbjct: 88 RIDSPALVKAKQNGAYVTSEMEEFIKYCP--AKIYGVTGSDGKTTTTTLIYNMLKEQGYK 145
Query: 72 AFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQ---MEIPNKYFCPTVSVVLNL 128
++VGGN+G PL F I + K V+E+SS+Q M++ P V+V+ N+
Sbjct: 146 SWVGGNIGAPL----FSRIEEIDPEDK---VVLELSSFQLMGMDV-----SPEVAVITNI 193
Query: 129 TPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGV 188
+P+HL+ HK M+ Y K +F + N + +L N+ N +K + G
Sbjct: 194 SPNHLDIHKDMEEYVNAKKSIFKYQGNQDVVILNRDNECTNAMVKEAK------GKVRQF 247
Query: 189 KIDTEAKTASF---EVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVD-VEA 244
I+ E + + ++ + ++ +K+ G HN N + A S + D+ VD ++
Sbjct: 248 SIEEELTSGGYLKGDILCIDGKKVCKISEVKLRGMHNVAN-LLTAFSAIKEDVSVDNMKK 306
Query: 245 LNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGG 301
+ +T E + HR + V R++ GV + +DS A++ T GL K VIL+ G
Sbjct: 307 VATTFEGVE---HRCEFV-RELDGVKYYNDSIASSPTRTLAGLRAF--DKPVILIAG 357
>gi|313147882|ref|ZP_07810075.1| D-glutamic acid-adding enzyme [Bacteroides fragilis 3_1_12]
gi|313136649|gb|EFR54009.1| D-glutamic acid-adding enzyme [Bacteroides fragilis 3_1_12]
Length = 444
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 151/306 (49%), Gaps = 32/306 (10%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
L + G ++SE++FA + K++ +TG+NGK+T + + + G+ + GN+G
Sbjct: 82 LKEQGTPIISEIEFAGRYT--DAKMICITGSNGKTTTTSLIYHIFKSAGLNVGLAGNIGK 139
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDHLERHK-T 138
L AL ++ + V+E+SS+Q++ N Y F ++V++N+TPDHL+R+
Sbjct: 140 SL--------ALQVAEEEHDYYVIELSSFQLD--NMYKFRADIAVLMNITPDHLDRYDHC 189
Query: 139 MKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGA--FPGVKIDTEAKT 196
M+NY K + + T F N ++ I + I A +P I E
Sbjct: 190 MQNYINAKFRITQN--QTSEDAFIFWN---DDPIIKRELDKHGICAHLYPFSAIKEEGSI 244
Query: 197 ASFE----VPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEIL 252
A E V + ++ + + G+HN +N+ A +S L G+ E + +
Sbjct: 245 AYVEDHEVVITAPIAFNMEQEQLALTGQHNLYNSLAAGISA-NL-AGITKENIRRALSDF 302
Query: 253 RTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESN 312
+ HR++ V R ++G+ +++DSKATN+ + L + K V++LGG+ K G +
Sbjct: 303 QGVEHRLEKVAR-VRGIDFINDSKATNVNSCWYALQSMTT-KTVLILGGKDK---GNDYT 357
Query: 313 GFEKLI 318
E+L+
Sbjct: 358 EIEELV 363
>gi|220920537|ref|YP_002495838.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
[Methylobacterium nodulans ORS 2060]
gi|219945143|gb|ACL55535.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Methylobacterium
nodulans ORS 2060]
Length = 460
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/273 (30%), Positives = 127/273 (46%), Gaps = 40/273 (14%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
+A+TGTNGKST + +L G + +GGN+G A +A P+ +V V+
Sbjct: 116 FVAITGTNGKSTTTALIAHVLRETGHDVQMGGNIGT-----AILSLAPPAPG---RVHVI 167
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLL--- 161
E+SS+Q+++ P+V V+LN+TPDHL+RH M NYA K L + + +G+
Sbjct: 168 EMSSFQIDL-TPTLKPSVGVLLNITPDHLDRHGDMANYAGIKERLIASSDHAVIGVDDDY 226
Query: 162 ----------PFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQ 211
P H+ E G I A GV ID + S G+ S
Sbjct: 227 TRAIAARHAGPLTRVHVGETAPG-----PGILARHGVLIDGCTEPPSPVADLTGIPS--- 278
Query: 212 LHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTW 271
+ G HN+ NA +A + +GV +A + PHRM+ V R V +
Sbjct: 279 -----LRGSHNWQNAGIA--YAVARALGVAPDAFAQALRSFPGLPHRMEEVGRR-GSVLF 330
Query: 272 VDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
++DSKATN ++T L + +LGG+ K
Sbjct: 331 INDSKATNADSTEKALAAFP--RVHWILGGKPK 361
>gi|379022992|ref|YP_005299653.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Rickettsia
canadensis str. CA410]
gi|376323930|gb|AFB21171.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Rickettsia
canadensis str. CA410]
Length = 455
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 137/281 (48%), Gaps = 27/281 (9%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
+ S++D + R++ +AV GTNGKST + +LN G++ V GN+G P +A
Sbjct: 90 ITSDIDLLFEK-SRNLNFIAVIGTNGKSTTTALISHILNSNGLDYPVAGNIGVPALKA-- 146
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
+SK + V+E+SS+Q+++ K F ++V+LN+TPDHL+RHK M Y K
Sbjct: 147 -----KNSKDGY---VLELSSFQLDLV-KTFTAKIAVLLNITPDHLDRHKDMNGYIKAKS 197
Query: 148 HLFSHMVNTKLGLLPFGNQHLNEA-IKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGV 206
+F M ++ N + + +K + + F KI + + +
Sbjct: 198 KIFDRMDKNSYAVINIDNDYCRKIFMKLQQEQRIKLIPFSVTKILEKGISVVNNIINYSF 257
Query: 207 V--SQLQL-HNMKVMGRHNYHN--AAVAALSVLGLDIGVD-VEALNSTIEILRTPPHRMQ 260
S +L N + G HN N A+ A ++GL+ +EA++S ++ PHRMQ
Sbjct: 258 FGNSNFKLPFNKNLQGIHNCENIAASYAVAKIMGLEESTKIIEAISS----FQSLPHRMQ 313
Query: 261 IVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGG 301
+ I +++ +DSKATN + L +K + L G
Sbjct: 314 YIGS-INNISFYNDSKATN---AISALQSIKALDNIYWLAG 350
>gi|393782275|ref|ZP_10370460.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides
salyersiae CL02T12C01]
gi|392673546|gb|EIY67005.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides
salyersiae CL02T12C01]
Length = 444
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 148/305 (48%), Gaps = 30/305 (9%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
L + G ++SE++FA + K++ +TG+NGK+T + + + G+ + GN+G
Sbjct: 82 LKEQGTPIISEIEFAGRYT--DAKMICITGSNGKTTTTSLIYHIFKSAGLNVGLAGNIGK 139
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDHLERHK-T 138
L AL ++ K ++E+SS+Q++ N Y F ++V++N+TPDHL+R+
Sbjct: 140 SL--------ALQVAEDKHDYYIIELSSFQLD--NMYDFRANIAVLMNITPDHLDRYDHC 189
Query: 139 MKNYALTKCHLFSHMVNTKLGLL----PFGNQHLNE-AIKGHRFNLAWIGAFPGVKIDTE 193
M+NY K + + + P + L + +K H + A + GV E
Sbjct: 190 MQNYIDAKFRITRNQTQDDAFIFWNDDPIIKRELEKHGLKAHLYPFAAVKE-DGVIAYVE 248
Query: 194 AKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILR 253
P + ++ + + G+HN +N+ A +S L G+ + + + +
Sbjct: 249 DHEVKINEP---IAFNMEQEKLALTGQHNLYNSLAAGISA-NL-AGITKDDIRKALSDFK 303
Query: 254 TPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNG 313
HR++ V R + G+ +++DSKATN+ + L + K V++LGG+ K G +
Sbjct: 304 GVEHRLEKVAR-VGGIDFINDSKATNVNSCWYALQSMTT-KTVLILGGKDK---GNDYTE 358
Query: 314 FEKLI 318
E L+
Sbjct: 359 IEDLV 363
>gi|330811581|ref|YP_004356043.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|423699137|ref|ZP_17673627.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Pseudomonas
fluorescens Q8r1-96]
gi|327379689|gb|AEA71039.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|387997119|gb|EIK58449.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Pseudomonas
fluorescens Q8r1-96]
Length = 448
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 136/289 (47%), Gaps = 43/289 (14%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+A++G+N KSTV T VG+M G VGGNLG P AL ++ V+
Sbjct: 111 IIAISGSNAKSTVTTLVGEMAAAAGKRVAVGGNLGTP---------ALDLLSDDVELYVM 161
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFG 164
E+SS+Q+E + + V+ VLN++ DH++R+ + Y HL H + + F
Sbjct: 162 ELSSFQLETTD-HLGAEVATVLNVSEDHMDRYSGLPAY-----HLAKHRIFRGARQVVFN 215
Query: 165 NQH------LNEAIKGHRFNLAWIGAFPGVKIDTE--AKTASFEVPAVGVVSQLQLHNMK 216
Q L E + F L + F G + E K +FE + + + +K
Sbjct: 216 RQDALTRPLLGEGMPCWSFGLG-VPDFKGFGLREENGEKYLAFEFQNL-----MPVRELK 269
Query: 217 VMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSK 276
+ G HN A A LG +G+ +A+ S + HR Q V RD+ GV W +DSK
Sbjct: 270 IRGAHN--QANALAALALGHAVGLPFDAMLSALRTFAGLEHRCQWV-RDLDGVAWYNDSK 326
Query: 277 ATNLEATCTGL----MDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPL 321
ATN+ A + D++G K V++ GG K + F+ L +P+
Sbjct: 327 ATNVGAALAAIEGLGADIEG-KLVLIAGGDGKGAD------FKDLRDPV 368
>gi|153214090|ref|ZP_01949224.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
1587]
gi|153826875|ref|ZP_01979542.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
MZO-2]
gi|124115516|gb|EAY34336.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
1587]
gi|149739291|gb|EDM53547.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
MZO-2]
Length = 440
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 131/272 (48%), Gaps = 41/272 (15%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
++A+TG+NGKSTV G + N G++A VGGN+G P +L P ++ V+
Sbjct: 110 VIAITGSNGKSTVTDLSGVLANAAGVKAAVGGNIGVP---------SLDLISPDVELYVL 160
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSH----MVNT-KLG 159
E+SS+Q+E + + LNL+ DH++R++ M++Y K +F H +VN
Sbjct: 161 ELSSFQLETTSSLKL-KAAAFLNLSEDHMDRYQGMEDYRQAKLRIFDHAETAVVNADDTQ 219
Query: 160 LLPFGNQHLNEAIKG----HRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNM 215
P HL G +F+LA + EA A E +
Sbjct: 220 TFPDHAAHLQVVTFGVEQAAQFSLAQHQGREYLFARDEAVMACAE--------------L 265
Query: 216 KVMGRHNYHN--AAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVD 273
++GRHN N +A L G++ + ++AL S + HR Q+V D G+ WV+
Sbjct: 266 SLVGRHNVANVLTVLALLDSAGVNFRLALDALKSYTGL----THRCQVV-ADNHGIKWVN 320
Query: 274 DSKATNLEATCTGLMDLKGH-KCVILLGGQAK 304
DSKATN+ +T L LK + +L+GG K
Sbjct: 321 DSKATNVASTLAALSGLKIEGQLYLLVGGVGK 352
>gi|32490957|ref|NP_871211.1| hypothetical protein WGLp208 [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|30316007|sp|Q8D2Z4.1|MURD_WIGBR RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|25166163|dbj|BAC24354.1| murD [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 438
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 149/284 (52%), Gaps = 24/284 (8%)
Query: 27 RVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAA 86
++ +++ A+ R I +A+TG+NGKSTV + +G + + G+ +GGNLG P +
Sbjct: 91 EIIGDIELFAREASRPI--IAITGSNGKSTVTSMIGAIALNSGLSVGIGGNLGTPALDLL 148
Query: 87 FHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTV-SVVLNLTPDHLERHKT-MKNYAL 144
++ +Q+ ++E+SS+Q+E + T+ S +LN+T DH++R+ + Y L
Sbjct: 149 --------NEKSYQLYIIELSSFQLE--TTFNLKTIASSILNVTHDHMDRYPLGINQYRL 198
Query: 145 TKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAV 204
K ++ N K+ ++ + ++ + ++ + G + K ++ V V
Sbjct: 199 IKLKIYK---NAKVKIINL-DDYMTWPVHKNKSVCIGFSSHKGKYCIKKHKKNNWMV--V 252
Query: 205 GVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHR 264
L+ MK+ G HNY NA V+ + L I ++ +LN T++ PHR QI+H+
Sbjct: 253 NNKFLLKCSEMKISGFHNYLNALVSLIFSDILKIPREI-SLN-TLKNFSGLPHRFQIIHK 310
Query: 265 DIQGVTWVDDSKATNLEATCTGLMDLKGHKCV-ILLGGQAKVLN 307
++W++DSK+TN+ +T L +K + +LLGG +K N
Sbjct: 311 K-NNISWINDSKSTNVSSTIAALSSIKIKGNIHLLLGGDSKKAN 353
>gi|149005804|ref|ZP_01829543.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
pneumoniae SP18-BS74]
gi|307126882|ref|YP_003878913.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae 670-6B]
gi|417676448|ref|ZP_12325861.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA17545]
gi|418095790|ref|ZP_12732906.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA16531]
gi|418112041|ref|ZP_12749044.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA41538]
gi|418132342|ref|ZP_12769217.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA11304]
gi|418154728|ref|ZP_12791459.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA16242]
gi|418225121|ref|ZP_12851750.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae NP112]
gi|419466824|ref|ZP_14006706.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA05248]
gi|419512095|ref|ZP_14051729.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA05578]
gi|419516379|ref|ZP_14055997.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA02506]
gi|419525433|ref|ZP_14064998.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA14373]
gi|421282886|ref|ZP_15733675.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA04216]
gi|421298150|ref|ZP_15748840.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA60080]
gi|147762744|gb|EDK69704.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
pneumoniae SP18-BS74]
gi|306483944|gb|ADM90813.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae 670-6B]
gi|332077113|gb|EGI87575.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA17545]
gi|353772570|gb|EHD53076.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA16531]
gi|353785690|gb|EHD66108.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA41538]
gi|353808008|gb|EHD88277.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA11304]
gi|353823020|gb|EHE03195.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA16242]
gi|353882429|gb|EHE62240.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae NP112]
gi|379543537|gb|EHZ08686.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA05248]
gi|379559824|gb|EHZ24851.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA14373]
gi|379636565|gb|EIA01123.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA05578]
gi|379640382|gb|EIA04921.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA02506]
gi|395882752|gb|EJG93796.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA04216]
gi|395903653|gb|EJH14581.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA60080]
Length = 450
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 145/297 (48%), Gaps = 23/297 (7%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L G V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LAKGIPVLTEVELAYLI--SEAPIIGITGSNGKTTTTTMIGEVLTAAGQHGLLSGNIGYP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A S K V+E+SS+Q+ + + F P ++V+ NL P H++ H +
Sbjct: 151 ASQVAQTA----SDKDTL---VMELSSFQL-MGVQEFHPEIAVITNLMPTHIDYHGSFSE 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEV 201
Y K ++ + M +L F NQ L + + A + F ++ A ++
Sbjct: 203 YVAAKWNIQNKMTAADFLVLNF-NQDLAKDLTSK--TEATVVPFSTLEKVDGAYLEDGQL 259
Query: 202 PAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQI 261
G V + + + V G HN N A+A ++V L GVD + + T+ HR+Q
Sbjct: 260 YFRGEVV-MAANEIGVPGSHNVEN-ALATIAVAKLR-GVDNQTIKETLSAFGGVKHRLQF 316
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
V DI+GV + +DSK+TN+ AT L K V++ GG + N F++L+
Sbjct: 317 VD-DIKGVKFYNDSKSTNILATQKALSGFDNSKVVLIAGGLDR------GNEFDELV 366
>gi|307706272|ref|ZP_07643086.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
mitis SK321]
gi|307618363|gb|EFN97516.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
mitis SK321]
Length = 450
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 146/297 (49%), Gaps = 23/297 (7%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L G V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LSKGIPVLTEVELAYLI--SEAPIIGITGSNGKTTTTTMIGEVLTAAGQHGLLSGNIGYP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A + V+E+SS+Q+ + + F P ++V+ NL P H++ H + +
Sbjct: 151 ASQVA-------QTATDKDTLVMELSSFQL-MGVQEFHPEIAVITNLMPTHIDYHGSFEE 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEV 201
Y K ++ + M T +L F NQ L + + A + F ++ A ++
Sbjct: 203 YVAAKWNIQNKMTATDFLVLNF-NQDLAKELATK--TQATVVPFSTLEKVDGAYLEDGQL 259
Query: 202 PAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQI 261
G V + + + V G HN N A+A ++V L GVD + + T+ HR+Q
Sbjct: 260 YFRGEVV-MAANEIGVPGSHNVEN-ALATIAVAKLR-GVDNQTIKETLSAFGGVKHRLQF 316
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
V +I+GV + +DSK+TN+ AT L K +++ GG + N F++L+
Sbjct: 317 VD-EIKGVKFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------GNEFDELV 366
>gi|55820797|ref|YP_139239.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
thermophilus LMG 18311]
gi|55822698|ref|YP_141139.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
thermophilus CNRZ1066]
gi|386086409|ref|YP_006002283.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
thermophilus ND03]
gi|386344422|ref|YP_006040586.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase
(UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase)
(D-glutamic acid-adding enzyme) [Streptococcus
thermophilus JIM 8232]
gi|387909506|ref|YP_006339812.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
thermophilus MN-ZLW-002]
gi|62900662|sp|Q5M0D5.1|MURD_STRT1 RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|62900663|sp|Q5M4Y2.1|MURD_STRT2 RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|55736782|gb|AAV60424.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Streptococcus
thermophilus LMG 18311]
gi|55738683|gb|AAV62324.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Streptococcus
thermophilus CNRZ1066]
gi|312278122|gb|ADQ62779.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
thermophilus ND03]
gi|339277883|emb|CCC19631.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase
(UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase)
(D-glutamic acid-adding enzyme) [Streptococcus
thermophilus JIM 8232]
gi|387574441|gb|AFJ83147.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
thermophilus MN-ZLW-002]
Length = 450
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 86/281 (30%), Positives = 134/281 (47%), Gaps = 35/281 (12%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+ +TG+NGK+T T + +LNH G + GN+G P SE A S V+
Sbjct: 114 IIGITGSNGKTTTTTMIADVLNHGGKSGVLSGNIGFPASEVA-------QSVTNQDTLVM 166
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFG 164
E+SS+Q+ + + F P ++V+ NL P H++ H + + Y K ++ + M + +L F
Sbjct: 167 ELSSFQL-MGIESFHPHIAVITNLMPTHIDYHGSFEEYVAAKWNIQNEMTSDDFIILNF- 224
Query: 165 NQHLNEAIKGHRFNLAWIGAFPGV-KIDTEAKTASFEVPAVGVVSQLQLH--NMKVMGRH 221
NQ L + + A + F V K+D A E + +L +H + V G H
Sbjct: 225 NQDLAKELATQTN--AQVVPFSTVEKVD----GAYLENGGLYFKGELLMHADELGVPGSH 278
Query: 222 NYHNA----AVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKA 277
N NA AVA LS GV +A+ T+ HR+Q V I V + +DSK+
Sbjct: 279 NVENALATIAVAKLS------GVSNQAIKETLSSFGGVKHRLQFVDT-IDDVKFYNDSKS 331
Query: 278 TNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
TN+ AT L K +++ GG + N F++LI
Sbjct: 332 TNILATQKALSGFDNSKVILIAGGLDR------GNEFDELI 366
>gi|398343119|ref|ZP_10527822.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Leptospira inadai
serovar Lyme str. 10]
Length = 449
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 91/292 (31%), Positives = 135/292 (46%), Gaps = 28/292 (9%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V+SE++FA K++ VTGT+GKST +L+ A GGN+G S+
Sbjct: 90 VVSEVEFARAFF--FGKLIGVTGTDGKSTTTALTCHLLSKDFPGAQAGGNIGRAFSDFCL 147
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
+ L AV+E+SSYQ+E + VSV+LNL PDHLERH T+ NY K
Sbjct: 148 GPVPL---------AVLELSSYQLE-DSGPLSLDVSVILNLAPDHLERHGTLDNYFAAKA 197
Query: 148 HLFSHMVNTKLGLLPFGNQHLNEAIKGHRFN-LAWIGAFPGVKIDTEAKTASFEVPAVGV 206
+ N+ L ++ E I+ + N L IG F G + +A+ E
Sbjct: 198 RIIDK--NSSKHTLVVSSKLFRERIQ--QMNCLCKIGTF-GREEGNDARILDEERIIQTA 252
Query: 207 VSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDI 266
++ + G HN N + + L+ +G + + I PHR Q R
Sbjct: 253 KAEYDAKAFLLPGGHNLENLSASILAAEA--VGGNPANIQQAISGFTGLPHRFQQAGR-A 309
Query: 267 QGVTWVDDSKATNLEATCTGLMDLKGHKCV-ILLGGQAKVLNGQESNGFEKL 317
GVT+++DSK+TNL + G+ K K ++LGG+ K S FE L
Sbjct: 310 AGVTFINDSKSTNLHSMLAGMSTWKEKKSTCLILGGRPK------SESFEPL 355
>gi|379009801|ref|YP_005267614.1| UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase [Wigglesworthia
glossinidia endosymbiont of Glossina morsitans morsitans
(Yale colony)]
gi|375158325|gb|AFA41391.1| UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase [Wigglesworthia
glossinidia endosymbiont of Glossina morsitans morsitans
(Yale colony)]
Length = 438
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 136/265 (51%), Gaps = 20/265 (7%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+A+TG+NGKSTV +G++ ++ GI +GGNLG P A + + +K Q+ ++
Sbjct: 107 IIAITGSNGKSTVTAMLGKIASYAGIPVGMGGNLGTP----ALNLL----NKKDCQLYII 158
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKT-MKNYALTKCHLFSHMVNTKLGLLPF 163
EVSS+Q+E K VS +LN+T DH++R+ + Y K ++S+ +K+ L+
Sbjct: 159 EVSSFQLESTFK-LNTLVSSILNVTHDHMDRYPLGINQYRAYKLKIYSY---SKINLINL 214
Query: 164 GNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNY 223
+ L I N G + V +V L+ +MK+ G HNY
Sbjct: 215 -DDPLTWPIDNDNKNCVGFSKNSGTYQIKNIHNDMWLVANKQIV--LKCSHMKIRGYHNY 271
Query: 224 HNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEAT 283
N A++AL++ + + A+ ++ HR Q+V + V W++DSK+TN+E+T
Sbjct: 272 MN-ALSALAIADI-VNFPRIAIVKALKNFSGLSHRFQLVLKR-NNVIWINDSKSTNVEST 328
Query: 284 CTGLMDLKGHKCV-ILLGGQAKVLN 307
T LM + +LLGG +K N
Sbjct: 329 KTALMSTNTQGNIHLLLGGDSKSAN 353
>gi|423339277|ref|ZP_17317018.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Parabacteroides
distasonis CL09T03C24]
gi|409231179|gb|EKN24036.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Parabacteroides
distasonis CL09T03C24]
Length = 441
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 154/333 (46%), Gaps = 61/333 (18%)
Query: 14 KATGLACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAF 73
KA + L + G ++SE++FA + K++ +TG+NGK+T +L G++
Sbjct: 72 KAPIIQLLKKQGTPIISEIEFAGRYTDS--KMICITGSNGKTTTTMLTYHILKEAGVDVG 129
Query: 74 VGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDH 132
+ GN+GN L AL ++ V V+E+SS+Q++ N Y F ++++LN+TPDH
Sbjct: 130 LAGNVGNSL--------ALQVAEDPHAVYVIELSSFQLD--NMYDFRADIAIILNITPDH 179
Query: 133 LERHK-TMKNYALTKCHLFSHMVNT---------------------KLGLLPFGNQHLNE 170
L+R+ M+NY K + + K L PF H N
Sbjct: 180 LDRYNYEMQNYVDAKFRILQNQTKDDAFIFWNDDPIIAREIAKRHPKATLYPFAETHEN- 238
Query: 171 AIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAA 230
+KG+ N V I+T T + E + + G HN +N+ +
Sbjct: 239 GVKGYTEN-------NQVVIETVNGTFTMEQDLLALT-----------GTHNLYNSLASG 280
Query: 231 LSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDL 290
++ +DI E + +++ HR++ V R ++GV +++DSKATN+ + L +
Sbjct: 281 IASKIVDIH--DEKIRASLSDFTGVEHRLEKVLR-VRGVDYINDSKATNVNSCWYALQSM 337
Query: 291 KGHKCVILLGGQAKVLNGQESNGFEKLIEPLNH 323
V++LGG K G + + E+L+ H
Sbjct: 338 TT-PVVLILGGTDK---GNDYSEIEELVNKKVH 366
>gi|429748002|ref|ZP_19281229.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Capnocytophaga
sp. oral taxon 380 str. F0488]
gi|429161719|gb|EKY04096.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Capnocytophaga
sp. oral taxon 380 str. F0488]
Length = 444
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 144/289 (49%), Gaps = 26/289 (8%)
Query: 23 QSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPL 82
+ G V+SE++FA+Q I + +TG+NGK+T + G++ +GGN+G
Sbjct: 84 EKGIAVISEIEFASQYTDSLI--VGITGSNGKTTTTLLTYHIFKEAGLQVGLGGNIGYSF 141
Query: 83 SEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK-TMKN 141
+E + + P + V+E+SS+Q++ ++F P ++V+LN+TPDHL+R+ +N
Sbjct: 142 AE------LVATENPPYY--VLEISSFQLD-GIEHFAPHIAVLLNITPDHLDRYDYKFEN 192
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASF-- 199
Y +K + + + ++ + + + H I I+ E +F
Sbjct: 193 YINSKFRIAMNQTENDYLIYDADDEVITQWLSTHTIKSKLI----PFSIEKELPQGAFLK 248
Query: 200 ----EVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTP 255
+ +++ + + + G+HN N A SV + + +L +++ +
Sbjct: 249 DNKIYIMLENQTTEIDVEEISLRGKHNIKNTMAA--SVAARLVNIRNNSLRESLKGFKGA 306
Query: 256 PHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
PHR++ V + ++GVT+V+DSKATN+ + L +K V ++GGQ K
Sbjct: 307 PHRLEEV-KVVEGVTYVNDSKATNVNSVYYALDTIK-TPIVWIVGGQDK 353
>gi|423722747|ref|ZP_17696900.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Parabacteroides
merdae CL09T00C40]
gi|409242020|gb|EKN34785.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Parabacteroides
merdae CL09T00C40]
Length = 453
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 154/317 (48%), Gaps = 29/317 (9%)
Query: 14 KATGLACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAF 73
KA + L + G ++SE++FA + K++ +TG+NGK+T +L G++A
Sbjct: 84 KAPIIKKLKEKGTPIISEIEFAGRYT--DAKMICITGSNGKTTTTMLTYHILRQAGVDAG 141
Query: 74 VGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDH 132
+ GN+GN L AL ++ V V+E+SS+Q++ N Y F ++++LN+TPDH
Sbjct: 142 LAGNVGNSL--------ALQVAEDPHAVYVIELSSFQLD--NMYDFKADIAILLNITPDH 191
Query: 133 LERHK-TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAF-----P 186
L+R+ M+NY K + + + + + I R A + F
Sbjct: 192 LDRYNYEMQNYVDAKFRIIRNQTAEDAFIFWNDDPIIAREI-AKRHPQATLYPFAETHEA 250
Query: 187 GVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALN 246
GVK TE K E + L + + G HN +N+ + ++ DI E L
Sbjct: 251 GVKGYTEDKKIIIETSNGTFTMEEDL--LALSGTHNLYNSLASGIASKLEDIH--DENLR 306
Query: 247 STIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVL 306
+++ HR++ V R ++GV +++DSKATN+ + L + V++LGG K
Sbjct: 307 ASLSDFTGVEHRLEKVAR-VRGVDYINDSKATNVNSCWYALQSMTT-PLVLILGGTDK-- 362
Query: 307 NGQESNGFEKLIEPLNH 323
G + + E+L++ H
Sbjct: 363 -GNDYSEIEELVKKKVH 378
>gi|374376351|ref|ZP_09634009.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Niabella soli DSM
19437]
gi|373233191|gb|EHP52986.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Niabella soli DSM
19437]
Length = 445
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 149/285 (52%), Gaps = 28/285 (9%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V+SE++ A + S +I+A+TG+NGK+T + + +L G++A + GN+G ++
Sbjct: 90 VISEIELAYRFAGDS-RIVAITGSNGKTTTTSLIHHILKTGGLDAALVGNIGESFAKQ-- 146
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK-TMKNYALTK 146
+AL KP V VVEVSS+Q++ ++ F P ++V+ N+T DHL+R++ NY +K
Sbjct: 147 --VAL-DPKP---VYVVEVSSFQLDDIDR-FRPYIAVLTNITEDHLDRYEYNFNNYIASK 199
Query: 147 CHLFSHMVNTKLGLLPFGNQHLNEAIKG--HRFNLAWIGAFPGVKIDTEAKTASFEVPAV 204
+ + T F +E K +FN+ I P + ++ E A + +
Sbjct: 200 FRIIKNQEATDY----FIYNEDDEVTKASLDKFNIQSI-QLP-ISMENENSAAFIKDGDM 253
Query: 205 GVVS-----QLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRM 259
+ + + +++ + G+HN +N A ++ +DI E + ++ + HRM
Sbjct: 254 YIRTGEDFINMSIYDFTLKGKHNQYNTMAAGVTAATMDIR--KEKIREAVQTFQNLEHRM 311
Query: 260 QIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
+ V I+GV +++DSKATN+ +T L + +++LGG K
Sbjct: 312 EHVAT-IRGVEFINDSKATNVNSTWYALESMT-KPTILILGGVDK 354
>gi|426411403|ref|YP_007031502.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Pseudomonas
sp. UW4]
gi|426269620|gb|AFY21697.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Pseudomonas
sp. UW4]
Length = 448
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 141/287 (49%), Gaps = 39/287 (13%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+A++G+N KSTV T VG+M G VGGNLG P AL + ++ V+
Sbjct: 111 IVAISGSNAKSTVTTLVGEMAAAAGKRVAVGGNLGTP---------ALDLLRDDVELYVM 161
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLF----SHMVNTKLGL 160
E+SS+Q+E ++ V+ VLN++ DH++R+ + Y L K +F +VN + L
Sbjct: 162 ELSSFQLETTDQ-LNAEVATVLNVSEDHMDRYSGLPAYHLAKHRIFRGARQFVVNRQDAL 220
Query: 161 LPFGNQHLNEAIKGHRFNLAW--IGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVM 218
+ E F L+ AF G++ + K +FE + + + +K+
Sbjct: 221 ---SRPLMGEGQPCWTFGLSKPDFKAF-GIREEDGEKYLAFEFQNL-----MPVRELKIR 271
Query: 219 GRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKAT 278
G HN NA A G +G+ +A+ S++ HR Q V RD+ GV + +DSKAT
Sbjct: 272 GAHNQSNALAALAL--GHAVGLPFDAMLSSLRTFAGLEHRCQWV-RDLDGVGYYNDSKAT 328
Query: 279 NLEATCTGL----MDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPL 321
N+ A + D+ G K V++ GG K G E F+ L +P+
Sbjct: 329 NVGAALAAIEGLGADIDG-KVVLIAGGDGK---GAE---FKDLRDPV 368
>gi|325288828|ref|YP_004265009.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Syntrophobotulus
glycolicus DSM 8271]
gi|324964229|gb|ADY55008.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Syntrophobotulus
glycolicus DSM 8271]
Length = 454
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 132/270 (48%), Gaps = 19/270 (7%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
++ +TG+NGK+T T +G++ G A V GN+G +S L S + V
Sbjct: 109 VVGITGSNGKTTTTTLIGELAKKTGRPAVVAGNIGTAIS---GKVEGLGSRG----IVVA 161
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFG 164
E+SS+Q+E+ ++ ++V++N+TPDHL+RH T++NYA K +F + L +L +
Sbjct: 162 ELSSFQLELIDRLRV-NIAVLINITPDHLDRHGTLENYAAAKARIFENQTGKDLAVLSWD 220
Query: 165 NQHLNEAIKGHRFNLAWIGA----FPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGR 220
+ E K + + +I G+ + S + ++++ + +++ G+
Sbjct: 221 YPMVREYGKITQARVTYISTEELLADGIGLSGNDLVWSRDGKTTKIIAR---NELQLRGK 277
Query: 221 HNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNL 280
HN N +GL++G+ + + HR ++V G+ +++DSK TN
Sbjct: 278 HNLENVMCGI--AVGLEMGLSGPQIAEVLRGFAPVAHRQEVVG-SYDGILYINDSKGTNP 334
Query: 281 EATCTGLMDLKGHKCVILLGGQAKVLNGQE 310
++ L + V++ GG+ K L+ E
Sbjct: 335 DSAIKALQSYE-EPIVLIAGGKNKGLDMTE 363
>gi|398869798|ref|ZP_10625155.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Pseudomonas sp.
GM74]
gi|398210210|gb|EJM96862.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Pseudomonas sp.
GM74]
Length = 448
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 141/287 (49%), Gaps = 39/287 (13%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+A++G+N KSTV T VG+M G VGGNLG P AL ++ V+
Sbjct: 111 IVAISGSNAKSTVTTLVGEMAAAAGKRVAVGGNLGTP---------ALDLLSDDIELYVM 161
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLF----SHMVNTKLGL 160
E+SS+Q+E ++ V+ VLN++ DH++R+ + Y L K +F +VN + L
Sbjct: 162 ELSSFQLETTDQ-LNAEVATVLNVSEDHMDRYSGLPAYHLAKHRIFRGARQFVVNRQDAL 220
Query: 161 LPFGNQHLNEAIKGHRFNLAW--IGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVM 218
+ E F L+ AF G++ + K +FE + + + +K+
Sbjct: 221 ---SRPLMGEGQPCWTFGLSKPDFKAF-GIREEDGEKYLAFEFQNL-----MPVRELKIR 271
Query: 219 GRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKAT 278
G HN NA A G +G+ +A+ S++ HR Q V RD++GV + +DSKAT
Sbjct: 272 GAHNQSNALAALAL--GHAVGLPFDAMLSSLRTFAGLEHRCQWV-RDLEGVGYYNDSKAT 328
Query: 279 NLEATCTGL----MDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPL 321
N+ A + D+ G K V++ GG K G E F+ L +P+
Sbjct: 329 NVGAALAAIEGLGADIDG-KVVLIAGGDGK---GAE---FKDLRDPV 368
>gi|417915776|ref|ZP_12559375.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
mitis bv. 2 str. SK95]
gi|342832068|gb|EGU66369.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
mitis bv. 2 str. SK95]
Length = 450
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 146/297 (49%), Gaps = 23/297 (7%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L G V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LAKGIPVLTEVELAYLI--SEAPIIGITGSNGKTTTTTMIGEVLTAAGQHGLLSGNIGYP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A A + V+E+SS+Q+ + + F P ++V+ NL P H++ H + +
Sbjct: 151 ASQVAQTATAKDT-------LVMELSSFQL-MGVQEFHPEIAVITNLMPTHIDYHGSFEE 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEV 201
Y K ++ + M +L F NQ L + + A + F ++ A A ++
Sbjct: 203 YVAAKWNIQNKMTAADFLVLNF-NQDLAKELASK--TQATVVPFSTLEKVDGAYLADGQL 259
Query: 202 PAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQI 261
G V + + V G HN N A+A ++V L GVD + + T+ HR+Q
Sbjct: 260 YFRGEVV-MAASEIGVPGGHNVEN-ALATIAVAKLR-GVDNQTIKETLSAFGGVKHRLQF 316
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
V +I+GV + +DSK+TN+ AT L K +++ GG + N F++L+
Sbjct: 317 VD-EIKGVKFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------GNEFDELV 366
>gi|301310866|ref|ZP_07216795.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Bacteroides sp.
20_3]
gi|300830929|gb|EFK61570.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Bacteroides sp.
20_3]
Length = 445
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 154/333 (46%), Gaps = 61/333 (18%)
Query: 14 KATGLACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAF 73
KA + L + G ++SE++FA + K++ +TG+NGK+T +L G++
Sbjct: 76 KAPIIQLLKKQGTPIISEIEFAGRYTDS--KMICITGSNGKTTTTMLTYHILKEAGVDVG 133
Query: 74 VGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDH 132
+ GN+GN L AL ++ V V+E+SS+Q++ N Y F ++++LN+TPDH
Sbjct: 134 LAGNVGNSL--------ALQVAEDPHAVYVIELSSFQLD--NMYDFRADIAIILNITPDH 183
Query: 133 LERHK-TMKNYALTKCHLFSHMVNT---------------------KLGLLPFGNQHLNE 170
L+R+ M+NY K + + K L PF H N
Sbjct: 184 LDRYNYEMQNYVDAKFRILQNQTKDDAFIFWNDDPIIAREIAKRHPKATLYPFAETHEN- 242
Query: 171 AIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAA 230
+KG+ N V I+T T + E + + G HN +N+ +
Sbjct: 243 GVKGYTEN-------NQVVIETVNGTFTMEQDLLALT-----------GTHNLYNSLASG 284
Query: 231 LSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDL 290
++ +DI E + +++ HR++ V R ++GV +++DSKATN+ + L +
Sbjct: 285 IASKIVDIH--DEKIRASLSDFTGVEHRLEKVLR-VRGVDYINDSKATNVNSCWYALQSM 341
Query: 291 KGHKCVILLGGQAKVLNGQESNGFEKLIEPLNH 323
V++LGG K G + + E+L+ H
Sbjct: 342 TT-PVVLILGGTDK---GNDYSEIEELVNKKVH 370
>gi|116627601|ref|YP_820220.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
thermophilus LMD-9]
gi|122267801|sp|Q03L98.1|MURD_STRTD RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|116100878|gb|ABJ66024.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
thermophilus LMD-9]
Length = 450
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 86/281 (30%), Positives = 134/281 (47%), Gaps = 35/281 (12%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+ +TG+NGK+T T + +LNH G + GN+G P SE A S V+
Sbjct: 114 IIGITGSNGKTTTTTMIADVLNHGGKSGVLSGNIGFPASEVA-------QSVTNQDTLVM 166
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFG 164
E+SS+Q+ + + F P ++V+ NL P H++ H + + Y K ++ + M + +L F
Sbjct: 167 ELSSFQL-MGIESFHPHIAVITNLMPTHIDYHGSFEEYVAAKWNIQNEMTSDDFIILNF- 224
Query: 165 NQHLNEAIKGHRFNLAWIGAFPGV-KIDTEAKTASFEVPAVGVVSQLQLH--NMKVMGRH 221
NQ L + + A + F V K+D A E + +L +H + V G H
Sbjct: 225 NQDLAKELATQTN--AQVVPFSTVEKVD----GAYLENGGLYFKGELLMHADELGVPGSH 278
Query: 222 NYHNA----AVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKA 277
N NA AVA LS GV +A+ T+ HR+Q V I V + +DSK+
Sbjct: 279 NVENALATIAVAKLS------GVSNQAIKETLSSFGGVKHRLQFVDT-IDDVKFYNDSKS 331
Query: 278 TNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
TN+ AT L K +++ GG + N F++LI
Sbjct: 332 TNILATQKALSGFDNSKVILIAGGLDR------GNEFDELI 366
>gi|255015709|ref|ZP_05287835.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Bacteroides sp.
2_1_7]
gi|410104833|ref|ZP_11299744.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Parabacteroides sp.
D25]
gi|409233408|gb|EKN26245.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Parabacteroides sp.
D25]
Length = 441
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 153/318 (48%), Gaps = 31/318 (9%)
Query: 14 KATGLACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAF 73
KA + L + G ++SE++FA + K++ +TG+NGK+T +L G++
Sbjct: 72 KAPIIQLLKKQGTPIISEIEFAGRYTDS--KMICITGSNGKTTTTMLTYHILKEAGVDVG 129
Query: 74 VGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDH 132
+ GN+GN L AL ++ V V+E+SS+Q++ N Y F ++++LN+TPDH
Sbjct: 130 LAGNVGNSL--------ALQVAEDPHAVYVIELSSFQLD--NMYDFRADIAIILNITPDH 179
Query: 133 LERHK-TMKNYALTKCHLFSHMVNTKLGLLPFGNQH---LNEAIKGHRFNLAWIGAFP-- 186
L+R+ M+NY K + + TK F N E K H + A
Sbjct: 180 LDRYNYEMQNYVDAKFRILQNQ--TKDDAFIFWNDDPIIAREIAKRHPEATLYPFAETHE 237
Query: 187 -GVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEAL 245
GVK TE E + L + + G HN +N+ + ++ +DI E +
Sbjct: 238 NGVKGYTENNQVVIETANGTFTMEQDL--LALTGTHNLYNSLASGIASKIVDIH--DEKI 293
Query: 246 NSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKV 305
+++ HR++ V R ++GV +++DSKATN+ + L + V++LGG K
Sbjct: 294 RASLSDFTGVEHRLEKVLR-VRGVDYINDSKATNVNSCWYALQSMTT-PVVLILGGTDK- 350
Query: 306 LNGQESNGFEKLIEPLNH 323
G + + E+L+ H
Sbjct: 351 --GNDYSEIEELVNKKVH 366
>gi|54310305|ref|YP_131325.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
[Photobacterium profundum SS9]
gi|60390455|sp|Q6LMF4.1|MURD_PHOPR RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|46914746|emb|CAG21523.1| putative UDP-N-acetylmuramoylalanine-D-glutamate ligase
[Photobacterium profundum SS9]
Length = 447
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 150/318 (47%), Gaps = 46/318 (14%)
Query: 3 MLWLFLLEFQLKATGLACLL-------QSGKRVMSELDFAAQVIPRSIKILAVTGTNGKS 55
M WL + + + G+A +G ++ +++ A+V+ + ++A+TG+NGKS
Sbjct: 63 MNWLLEADLIVASPGIALATPELVAAKAAGIEIVGDIELFARVVTK--PVVAITGSNGKS 120
Query: 56 TVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPN 115
TV + +G+M GI VGGN+G AL + + V+E+SS+Q+E +
Sbjct: 121 TVTSLIGEMAKEAGINVGVGGNIG---------FAALDMLVNEHDLYVLELSSFQLETTS 171
Query: 116 KYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMV-----NTKLGLLP--FGNQHL 168
+V LNL+ DH++R+ +++Y+L K +F H L P F +Q
Sbjct: 172 SLQLKA-AVYLNLSEDHMDRYNGLEDYSLAKMRIFEHAELAVYNRDDLATFPVSFSHQIT 230
Query: 169 NEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAV 228
+ + L V + E A E P ++ ++ ++GRHN N+
Sbjct: 231 SFGFDNQDYGL--------VTLHGEEFLALDEQPI------MKTSDIALVGRHNVANSLA 276
Query: 229 AALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGL- 287
A ++I D +A+ ++ HR Q+V V WV+DSKATNL +T L
Sbjct: 277 ALALADAVNI--DRQAVCRALQRYNGLAHRCQLVVNQ-HDVKWVNDSKATNLASTLAALK 333
Query: 288 -MDLKGHKCVILLGGQAK 304
++L G K +L+GG K
Sbjct: 334 GLNLPG-KLHLLVGGDGK 350
>gi|423093677|ref|ZP_17081473.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Pseudomonas
fluorescens Q2-87]
gi|397889042|gb|EJL05525.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Pseudomonas
fluorescens Q2-87]
Length = 448
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 136/289 (47%), Gaps = 43/289 (14%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+A++G+N KSTV T VG+M G VGGNLG P AL ++ V+
Sbjct: 111 IIAISGSNAKSTVTTLVGEMAAAAGKRVAVGGNLGTP---------ALDLLSDDVELYVM 161
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFG 164
E+SS+Q+E ++ V+ VLN++ DH++R+ + Y HL H + + F
Sbjct: 162 ELSSFQLETTDQ-LNAEVATVLNISEDHMDRYSGLPAY-----HLAKHRIFRGARQVVFN 215
Query: 165 NQH------LNEAIKGHRFNLAWIGAFPGVKIDTE--AKTASFEVPAVGVVSQLQLHNMK 216
Q + E + F L + F G + E K +FE + + + +K
Sbjct: 216 RQDALTRPLIGEGLPYWTFGLG-VPDFKGFGLREENGEKYLAFEFQNL-----MPVRELK 269
Query: 217 VMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSK 276
V G HN A A LG +G+ EA+ S + HR Q V RD+ GV W +DSK
Sbjct: 270 VRGAHN--QANALAALALGHAVGLPFEAMLSALRNFAGLEHRCQWV-RDLDGVAWYNDSK 326
Query: 277 ATNLEATCTGL----MDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPL 321
ATN+ A + D++G K V++ GG K + F+ L +P+
Sbjct: 327 ATNVGAALAAIEGLGADIEG-KLVLIAGGDGKGAD------FKDLRDPV 368
>gi|88799425|ref|ZP_01115002.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Reinekea
blandensis MED297]
gi|88777735|gb|EAR08933.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Reinekea sp.
MED297]
Length = 463
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 133/265 (50%), Gaps = 21/265 (7%)
Query: 44 KILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAV 103
K++A+TG+N KSTV ++G+ L G + V GN+G P+ L + + VAV
Sbjct: 128 KVIAITGSNAKSTVTAWLGEALKAGGQKTLVAGNIGIPV---------LETDHAAYDVAV 178
Query: 104 VEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPF 163
+E+SS+Q+E+ ++ ++ VLN++ DH++R++T+ +Y K ++ +
Sbjct: 179 LELSSFQLELLSR-VNADIACVLNISEDHMDRYETLAHYVQAKQKIYFGAASVLYNRSDA 237
Query: 164 GNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNY 223
Q L + H + P + K E A G L + + + G HN
Sbjct: 238 LTQPL---VPDHVLKRTFASDAPDLNHYGLRKQDGNEWLAQGFDLVLPVSEVALPGGHNV 294
Query: 224 HNA-AVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEA 282
NA AV AL+ + G D A + + P+R Q + R+ G+T+++DSKATN+ +
Sbjct: 295 MNALAVLALADMA---GNDRSATLTALTSFSGLPYRCQAI-RERAGITFINDSKATNVGS 350
Query: 283 TCT---GLMDLKGHKCVILLGGQAK 304
T GL+ ++G +L GGQAK
Sbjct: 351 TTAALEGLVSVRGANIHLLAGGQAK 375
>gi|387791883|ref|YP_006256948.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Solitalea
canadensis DSM 3403]
gi|379654716|gb|AFD07772.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Solitalea
canadensis DSM 3403]
Length = 447
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 145/298 (48%), Gaps = 26/298 (8%)
Query: 14 KATGLACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAF 73
KA + +++ G R++SE++FA + K + +TG+NGK+T +L G+
Sbjct: 78 KAPIVKKIIEKGIRIVSEIEFAGRY--NKAKTICITGSNGKTTTTMLTYHILQKAGLNVG 135
Query: 74 VGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDH 132
+ GN+G A ++ + V+E+SS+Q++ N Y F ++++LN+TPDH
Sbjct: 136 LAGNVG--------QSFAKQVAEDNYDYYVLELSSFQLD--NMYEFKADIAILLNITPDH 185
Query: 133 LERHK-TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKID 191
L+R+ M+NY +K + + + + ++ + + ++F FP
Sbjct: 186 LDRYDYKMQNYVDSKFRVTQNQTSADAFIYCLDDEETMKVMANNKFEARL---FPFSLAQ 242
Query: 192 TEAKTASFEVPAVGVVSQLQLHNMKV-----MGRHNYHNAAVAALSVLGLDIGVDVEALN 246
+ A + + + NM + G+HN +N+ A ++ L+I D +L
Sbjct: 243 KVEQGAYATEDTIYIQTNKNNFNMTISELALQGKHNVNNSMAAGIAAKLLEIRSD--SLR 300
Query: 247 STIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
++ + PHR++ V R IQG+ +++DSKATN+ + L + K V + GG K
Sbjct: 301 ESLGDFQNVPHRLEHVAR-IQGIEFINDSKATNVNSVWFALESM-NTKVVWIAGGVDK 356
>gi|303254732|ref|ZP_07340833.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
pneumoniae BS455]
gi|303259957|ref|ZP_07345931.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
pneumoniae SP-BS293]
gi|303261363|ref|ZP_07347311.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
pneumoniae SP14-BS292]
gi|303264029|ref|ZP_07349950.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
pneumoniae BS397]
gi|303266343|ref|ZP_07352233.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
pneumoniae BS457]
gi|303268810|ref|ZP_07354598.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
pneumoniae BS458]
gi|387758960|ref|YP_006065938.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae INV200]
gi|410476145|ref|YP_006742904.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
pneumoniae gamPNI0373]
gi|418086436|ref|ZP_12723607.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA47033]
gi|418093534|ref|ZP_12730664.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA49138]
gi|418139005|ref|ZP_12775836.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA13338]
gi|418141294|ref|ZP_12778107.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA13455]
gi|418152433|ref|ZP_12789173.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA16121]
gi|418164032|ref|ZP_12800706.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA17371]
gi|418180046|ref|ZP_12816619.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA41688]
gi|418199624|ref|ZP_12836071.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA47976]
gi|418201974|ref|ZP_12838404.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA52306]
gi|419455102|ref|ZP_13995062.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae EU-NP04]
gi|419514249|ref|ZP_14053877.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae England14-9]
gi|419518503|ref|ZP_14058110.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA08825]
gi|421267901|ref|ZP_15718773.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae SPAR95]
gi|421284916|ref|ZP_15735693.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA60190]
gi|421297297|ref|ZP_15748000.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA58581]
gi|421306880|ref|ZP_15757526.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA60132]
gi|444388098|ref|ZP_21186090.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
pneumoniae PCS125219]
gi|444390179|ref|ZP_21188094.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
pneumoniae PCS70012]
gi|444391680|ref|ZP_21189492.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
pneumoniae PCS81218]
gi|444394188|ref|ZP_21191741.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
pneumoniae PNI0002]
gi|444397139|ref|ZP_21194626.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
pneumoniae PNI0006]
gi|444403562|ref|ZP_21200642.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
pneumoniae PNI0008]
gi|444404509|ref|ZP_21201460.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
pneumoniae PNI0009]
gi|444408812|ref|ZP_21205442.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
pneumoniae PNI0010]
gi|444418035|ref|ZP_21214029.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
pneumoniae PNI0360]
gi|444419135|ref|ZP_21215017.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
pneumoniae PNI0427]
gi|301801549|emb|CBW34241.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae INV200]
gi|302598272|gb|EFL65317.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
pneumoniae BS455]
gi|302637497|gb|EFL67984.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
pneumoniae SP14-BS292]
gi|302638876|gb|EFL69337.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
pneumoniae SP-BS293]
gi|302641675|gb|EFL72034.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
pneumoniae BS458]
gi|302644154|gb|EFL74411.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
pneumoniae BS457]
gi|302646434|gb|EFL76660.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
pneumoniae BS397]
gi|353759699|gb|EHD40282.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA47033]
gi|353767099|gb|EHD47638.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA49138]
gi|353805545|gb|EHD85819.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA13455]
gi|353819078|gb|EHD99276.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA16121]
gi|353832359|gb|EHE12477.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA17371]
gi|353846374|gb|EHE26407.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA41688]
gi|353866302|gb|EHE46204.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA47976]
gi|353867777|gb|EHE47667.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA52306]
gi|353905842|gb|EHE81258.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA13338]
gi|379629559|gb|EHZ94153.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae EU-NP04]
gi|379638739|gb|EIA03284.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae England14-9]
gi|379641482|gb|EIA06017.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA08825]
gi|395871325|gb|EJG82431.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae SPAR95]
gi|395886895|gb|EJG97910.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA60190]
gi|395892871|gb|EJH03861.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA58581]
gi|395908843|gb|EJH19720.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA60132]
gi|406369090|gb|AFS42780.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
pneumoniae gamPNI0373]
gi|444250644|gb|ELU57122.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
pneumoniae PCS125219]
gi|444256642|gb|ELU62980.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
pneumoniae PCS70012]
gi|444261255|gb|ELU67559.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
pneumoniae PNI0002]
gi|444262370|gb|ELU68668.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
pneumoniae PNI0006]
gi|444264008|gb|ELU70129.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
pneumoniae PNI0008]
gi|444265062|gb|ELU71093.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
pneumoniae PCS81218]
gi|444269106|gb|ELU74921.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
pneumoniae PNI0010]
gi|444276640|gb|ELU82185.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
pneumoniae PNI0009]
gi|444282161|gb|ELU87441.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
pneumoniae PNI0360]
gi|444287446|gb|ELU92373.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
pneumoniae PNI0427]
Length = 450
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 146/297 (49%), Gaps = 23/297 (7%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L G V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LAKGIPVLTEVELAYLI--SEAPIIGITGSNGKTTTTTMIGEVLTAAGQHGLLSGNIGYP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A + S K V+E+SS+Q+ + + F P ++V+ NL P H++ H +
Sbjct: 151 ASQVA----QIASDKDTL---VMELSSFQL-MGVQEFHPEIAVITNLMPTHIDYHGLFEE 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEV 201
Y K ++ + M +L F NQ L + + A + F ++ A ++
Sbjct: 203 YVAAKWNIQNKMTAADFLVLNF-NQDLVKDLASK--TEATVVPFSTLEKVDGAYLEDGQL 259
Query: 202 PAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQI 261
G V + + + V G HN N A+A ++V L GVD + + T+ HR+Q
Sbjct: 260 YFRGEVV-MAANEIGVPGSHNVEN-ALATIAVAKLR-GVDNQTIKETLSAFGGVKHRLQF 316
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
V DI+GV + +DSK+TN+ AT L K V++ GG + N F++L+
Sbjct: 317 VD-DIKGVKFYNDSKSTNILATQKALSGFDNSKVVLIAGGLDR------GNEFDELV 366
>gi|262383988|ref|ZP_06077124.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides sp.
2_1_33B]
gi|262294886|gb|EEY82818.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides sp.
2_1_33B]
Length = 445
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 153/318 (48%), Gaps = 31/318 (9%)
Query: 14 KATGLACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAF 73
KA + L + G ++SE++FA + K++ +TG+NGK+T +L G++
Sbjct: 76 KAPIIQLLKKQGTPIISEIEFAGRYTDS--KMICITGSNGKTTTTMLTYHILKEAGVDVG 133
Query: 74 VGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDH 132
+ GN+GN L AL ++ V V+E+SS+Q++ N Y F ++++LN+TPDH
Sbjct: 134 LAGNVGNSL--------ALQVAEDPHAVYVIELSSFQLD--NMYDFRADIAIILNITPDH 183
Query: 133 LERHK-TMKNYALTKCHLFSHMVNTKLGLLPFGNQH---LNEAIKGHRFNLAWIGAFP-- 186
L+R+ M+NY K + + TK F N E K H + A
Sbjct: 184 LDRYNYEMQNYVDAKFRILQNQ--TKDDAFIFWNDDPIIAREIAKRHPEATLYPFAETHE 241
Query: 187 -GVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEAL 245
GVK TE E + L + + G HN +N+ + ++ +DI E +
Sbjct: 242 NGVKGYTENNQVVIETANGTFTMEQDL--LALTGTHNLYNSLASGIASKIVDIH--DEKI 297
Query: 246 NSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKV 305
+++ HR++ V R ++GV +++DSKATN+ + L + V++LGG K
Sbjct: 298 RASLSDFTGVEHRLEKVLR-VRGVDYINDSKATNVNSCWYALQSMTT-PVVLILGGTDK- 354
Query: 306 LNGQESNGFEKLIEPLNH 323
G + + E+L+ H
Sbjct: 355 --GNDYSEIEELVNKKVH 370
>gi|416052134|ref|ZP_11578050.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Aggregatibacter
actinomycetemcomitans serotype e str. SC1083]
gi|347992404|gb|EGY33807.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Aggregatibacter
actinomycetemcomitans serotype e str. SC1083]
Length = 434
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 135/288 (46%), Gaps = 30/288 (10%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
LQ+G V+ +++ + + I+A+TG+NGKSTV T V +M G+ +GGN+G P
Sbjct: 85 LQAGVEVVGDIELFCREADK--PIVAITGSNGKSTVTTLVAEMAKAAGLSVGMGGNIGIP 142
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
AL + + V+E+SS+Q+E T + VLN+T DH+ R+ +++
Sbjct: 143 ---------ALSLLNQQHDLYVLELSSFQLETTYS-LKATAATVLNVTEDHMNRYVDLQD 192
Query: 142 YALTKCHLFSH----MVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTA 197
Y K ++ + ++N + L +Q + + N + ++ TE
Sbjct: 193 YRQAKLSIYDNCQTAVINAEDPLTLPTSQQPQKQVSFGESNADY-------RLKTENNKT 245
Query: 198 SFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPH 257
V L MK+ GRHNY NA A G+++ + + + H
Sbjct: 246 YLMAHDETV---LACDEMKLSGRHNYMNALAAIALAQA--AGINLTGIRTALREFGGLDH 300
Query: 258 RMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLK-GHKCVILLGGQAK 304
R Q+ H GV W++DSKATN+ +T L L+ K +LLGG K
Sbjct: 301 RFQVAHI-ADGVRWINDSKATNVGSTVAALTGLQIAGKLHLLLGGDGK 347
>gi|300722057|ref|YP_003711337.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Xenorhabdus
nematophila ATCC 19061]
gi|297628554|emb|CBJ89126.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Xenorhabdus
nematophila ATCC 19061]
Length = 441
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 136/277 (49%), Gaps = 53/277 (19%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+A+TG+NGKSTV T VG+M G + VGGN+G P AL K Q+ V+
Sbjct: 112 IVAITGSNGKSTVTTLVGEMAKEAGWQVGVGGNIGVP---------ALELLKKSCQLYVL 162
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERH-KTMKNYALTKCHLFSH----MVNTKLG 159
E+SS+Q+E + VLN+T DH+ R+ + + Y K ++ +VN +
Sbjct: 163 ELSSFQLET-TYSLKAAAATVLNVTEDHMVRYPEGLPQYRAAKLRIYDQAKACIVNAQDQ 221
Query: 160 L-LPFGNQ---HLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQ---LQL 212
L LP G + +++ + + L D+E + VV+Q L
Sbjct: 222 LTLPAGGEESCYISFGVDSGDYQL-----------DSEHQQL--------VVNQCPVLAT 262
Query: 213 HNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPP---HRMQIVH-RDIQG 268
+M++ G+HNY N A +G+ EA +++ LRT HR Q+VH RD G
Sbjct: 263 RDMQLAGQHNYTNGLAALALA--DAVGIPREA---SLQALRTYSGLDHRFQVVHMRD--G 315
Query: 269 VTWVDDSKATNLEATCTGLMDLKGHKCVILL-GGQAK 304
+ W++DSKATN+ +T L LK + LL GG K
Sbjct: 316 IRWINDSKATNVGSTQAALSGLKVEGTLYLLVGGDGK 352
>gi|444400342|ref|ZP_21197749.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase, partial
[Streptococcus pneumoniae PNI0007]
gi|444266634|gb|ELU72577.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase, partial
[Streptococcus pneumoniae PNI0007]
Length = 418
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 146/297 (49%), Gaps = 23/297 (7%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L G V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 61 LAKGIPVLTEVELAYLI--SEAPIIGITGSNGKTTTTTMIGEVLTAAGQHGLLSGNIGYP 118
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A + S K V+E+SS+Q+ + + F P ++V+ NL P H++ H +
Sbjct: 119 ASQVA----QIASDKDTL---VMELSSFQL-MGVQEFHPEIAVITNLMPTHIDYHGLFEE 170
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEV 201
Y K ++ + M +L F NQ L + + A + F ++ A ++
Sbjct: 171 YVAAKWNIQNKMTAADFLVLNF-NQDLVKDLASK--TEATVVPFSTLEKVDGAYLEDGQL 227
Query: 202 PAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQI 261
G V + + + V G HN N A+A ++V L GVD + + T+ HR+Q
Sbjct: 228 YFRGEVV-MAANEIGVPGSHNVEN-ALATIAVAKLR-GVDNQTIKETLSAFGGVKHRLQF 284
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
V DI+GV + +DSK+TN+ AT L K V++ GG + N F++L+
Sbjct: 285 VD-DIKGVKFYNDSKSTNILATQKALSGFDNSKVVLIAGGLDR------GNEFDELV 334
>gi|393772223|ref|ZP_10360680.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Novosphingobium
sp. Rr 2-17]
gi|392722362|gb|EIZ79770.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Novosphingobium
sp. Rr 2-17]
Length = 456
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 124/261 (47%), Gaps = 33/261 (12%)
Query: 23 QSGKRVMSELDFAAQV---IPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLG 79
++G V+ +++ A +PR +++ +TGTNGKST + V +L G+ A VGGN+G
Sbjct: 92 RAGVPVIGDIELFAMARADLPRH-RVVGITGTNGKSTTTSLVCHLLECAGVPARVGGNIG 150
Query: 80 NPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTM 139
P+ A P+ V V+E+SSYQ+++ C V+ +LN+TPDHL+R+ +
Sbjct: 151 VPVLGA--------DPLPEGGVYVLELSSYQIDLTFSLDC-DVAALLNVTPDHLDRYGSF 201
Query: 140 KNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPG-VKIDTEAKTAS 198
+ YA +K LF + + G+ A + H PG V++ A A
Sbjct: 202 EAYAASKERLFEMQSRSHHAVFGIGDNETRTAARMHAAQRD-----PGLVRLVDGADLA- 255
Query: 199 FEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHR 258
LQ + G HN NAAV V L G+ + PHR
Sbjct: 256 ----------LLQQEWPSLQGPHNLQNAAVGIAIVEAL--GIKKAQWKKALRTFSGLPHR 303
Query: 259 MQIVHRDIQGVTWVDDSKATN 279
M+ V + GV +++DSKATN
Sbjct: 304 MERVA-EANGVIYINDSKATN 323
>gi|256841648|ref|ZP_05547154.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Parabacteroides sp.
D13]
gi|256736542|gb|EEU49870.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Parabacteroides sp.
D13]
Length = 445
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 153/318 (48%), Gaps = 31/318 (9%)
Query: 14 KATGLACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAF 73
KA + L + G ++SE++FA + K++ +TG+NGK+T +L G++
Sbjct: 76 KAPIIQLLKKQGTPIISEIEFAGRYTDS--KMICITGSNGKTTTTMLTYHILKEAGVDVG 133
Query: 74 VGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDH 132
+ GN+GN L AL ++ V V+E+SS+Q++ N Y F ++++LN+TPDH
Sbjct: 134 LAGNVGNSL--------ALQVAEDPHAVYVIELSSFQLD--NMYDFRADIAIILNITPDH 183
Query: 133 LERHK-TMKNYALTKCHLFSHMVNTKLGLLPFGNQH---LNEAIKGHRFNLAWIGAFP-- 186
L+R+ M+NY K + + TK F N E K H + A
Sbjct: 184 LDRYNYEMQNYVDAKFRILQNQ--TKDDAFIFWNDDPIIAREIAKRHPEATLYPFAETHE 241
Query: 187 -GVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEAL 245
GVK TE E + L + + G HN +N+ + ++ +DI E +
Sbjct: 242 NGVKGYTENNQVVIETANGTFTMEQDL--LALTGTHNLYNSLASGIASKIVDIH--DEKI 297
Query: 246 NSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKV 305
+++ HR++ V R ++GV +++DSKATN+ + L + V++LGG K
Sbjct: 298 RASLSDFTGVEHRLEKVLR-VRGVDYINDSKATNVNSCWYALQSMTT-PVVLILGGTDK- 354
Query: 306 LNGQESNGFEKLIEPLNH 323
G + + E+L+ H
Sbjct: 355 --GNDYSEIEELVNKKVH 370
>gi|302383885|ref|YP_003819708.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Brevundimonas
subvibrioides ATCC 15264]
gi|302194513|gb|ADL02085.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Brevundimonas
subvibrioides ATCC 15264]
Length = 492
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 138/292 (47%), Gaps = 46/292 (15%)
Query: 44 KILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAV 103
K++A+TGTNGKST +G +L G+ +GGN+G +AL + P V V
Sbjct: 117 KVVAITGTNGKSTTTALIGWVLKQAGLTVHIGGNIG-------IGVLALSAPTPD-AVYV 168
Query: 104 VEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLL-- 161
VEVSSYQ+++ F P V+++ N++PDHL+RH M+ Y K LF M K+ L+
Sbjct: 169 VEVSSYQLDL-TTSFAPDVAILTNISPDHLDRHGGMEGYVAAKARLFQVMSPEKVALIGV 227
Query: 162 --PFGNQHLNEAIKGHRFNLAWI------------GAFPGVKIDTE--AKTASFE----- 200
+G + +N A+ L+ I G P ++ T + +F+
Sbjct: 228 DDDWGWKTVN-ALNDRGLRLSTITTRTPPQFVDPAGGVPVAELATRLPDQKPAFDAGRFI 286
Query: 201 -VPAVG---VVSQLQLHNM----KVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEIL 252
V A G V + + ++ + GRHN NAA A + L GV EA +
Sbjct: 287 IVDATGGKLVADGVAIADLAPARSLPGRHNAQNAAFAYAAARAL--GVSTEAAVDGLMTF 344
Query: 253 RTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
HRM+ V + V +V+DSKATN +A LM + GG+AK
Sbjct: 345 PGLAHRMETVGH-LGPVRFVNDSKATNADAARQALMSYP--TSFWIAGGRAK 393
>gi|393786143|ref|ZP_10374281.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides nordii
CL02T12C05]
gi|392660507|gb|EIY54119.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides nordii
CL02T12C05]
Length = 462
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 150/309 (48%), Gaps = 38/309 (12%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
L G ++SE++FA + K++ +TG+NGK+T + + + G+ + GN+G
Sbjct: 100 LKAQGTPIISEIEFAGRYT--DAKMVCITGSNGKTTTTSLIYHIFKSAGLNVGLAGNIGK 157
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDHLERHK-T 138
L AL ++ K V+E+SS+Q++ N Y F ++V++N+TPDHL+R+
Sbjct: 158 SL--------ALQVAEGKHDYYVIELSSFQLD--NMYEFRANIAVLMNITPDHLDRYDHC 207
Query: 139 MKNYALTKCHLFSHMVNTKLGLL----PFGNQHLNE-AIKGHRFNLAWI---GAFPGVKI 190
M+NY K + + + P + L + +K H + A + GA V+
Sbjct: 208 MQNYIDAKFRITQNQTQDDAFVFWNDDPIIKRELEKHGLKAHLYPFAAVKEDGAIAYVE- 266
Query: 191 DTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSV-LGLDIGVDVEALNSTI 249
D E K + ++ + + G+HN +N+ A +S L G+ E + +
Sbjct: 267 DNEVKITE------PIAFNMEQEKLALTGQHNLYNSLAAGISANLA---GITKEDIRKAL 317
Query: 250 EILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQ 309
+ HR++ V R + G+ +++DSKATN+ + L + K V++LGG+ K G
Sbjct: 318 SDFKGVEHRLEKVAR-VGGIDFINDSKATNVNSCWYALQSMTT-KTVLILGGKDK---GN 372
Query: 310 ESNGFEKLI 318
+ E L+
Sbjct: 373 DYTEIEDLV 381
>gi|358466909|ref|ZP_09176686.1| hypothetical protein HMPREF9093_01161 [Fusobacterium sp. oral taxon
370 str. F0437]
gi|357068565|gb|EHI78566.1| hypothetical protein HMPREF9093_01161 [Fusobacterium sp. oral taxon
370 str. F0437]
Length = 432
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 148/315 (46%), Gaps = 47/315 (14%)
Query: 9 LEFQLKATGLAC------LLQSGKRVMSELDFAAQVIPRS---IKILAVTGTNGKSTVVT 59
+EF +K+ G+ + + G +V+ E++ A + KI+A+TGTNGKST
Sbjct: 48 IEFFIKSPGIPYNNFVKEVQKRGIKVLDEIEVAYNYMTEKNLKTKIIAITGTNGKSTTTA 107
Query: 60 FVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQME-IPNKYF 118
+ +LNH G + GN+G LSE H + +E+SS+Q+E + N F
Sbjct: 108 KISDLLNHAGYKTCYAGNIGRSLSEVLLH-------EKDLDFVSLELSSFQLENVEN--F 158
Query: 119 CPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFGNQHLN---EAIKGH 175
P +S+++N+ PDH+ER+K+ Y TK ++ + + + ++ + + IK
Sbjct: 159 RPYISMIINMGPDHIERYKSFDEYYDTKFNISKNQDEKQYFIENIDDEEIEKRAKQIKAK 218
Query: 176 RFNLAWIGAFPGVKIDTEAKTASFEVP----AVGVVSQLQLHNMKVMGRHNYHNA--AVA 229
R ++ +++K A+ V VG + + + + G HN N VA
Sbjct: 219 RISV------------SKSKEANVYVANDKIYVGKDCIIDVDKLSLKGIHNVENTLFMVA 266
Query: 230 ALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMD 289
+L +D E L + I HR ++ + V +++DSKATN+++T +
Sbjct: 267 TSEIL----NIDREKLKEFLMIATPLEHRTELFF-NYGKVKFINDSKATNVDSTKFAIQA 321
Query: 290 LKGHKCVILLGGQAK 304
K +++ GG K
Sbjct: 322 NKD--SILICGGYDK 334
>gi|332878268|ref|ZP_08445994.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Capnocytophaga
sp. oral taxon 329 str. F0087]
gi|332683719|gb|EGJ56590.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Capnocytophaga
sp. oral taxon 329 str. F0087]
Length = 444
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 154/311 (49%), Gaps = 33/311 (10%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
++SE++FA+Q +I +A+TG+NGK+T + G+E +GGN+G +E
Sbjct: 89 IISEIEFASQYTHSTI--VAITGSNGKTTTTLLTHHIFKQAGLEVGLGGNIGYSFAELVA 146
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK-TMKNYALTK 146
H S+ P + V+E+SS+Q++ ++F P ++V+LN+TPDHL+R+ +NY +K
Sbjct: 147 H-----SNPPYY---VLEISSFQLD-GIEHFAPHIAVLLNITPDHLDRYDYKFENYIASK 197
Query: 147 CHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASF------E 200
+ + + + +N+ + H I G I+ E +F
Sbjct: 198 FRIAMNQTANDYFIYDADDPVINDWLTTHPLKPKCI----GFSIEKELSEGAFLKDNKIH 253
Query: 201 VPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQ 260
+ + + + + + G+HN N AA++ ++I +L +++ + HR++
Sbjct: 254 IMLENQTTVIDVEEISLKGKHNIKNTMAAAVAARLVNI--RNASLRESLKGFQGAAHRLE 311
Query: 261 IVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLIEP 320
V + ++GVT+++DSKATN+ + L +K V ++GGQ K N + L+ P
Sbjct: 312 EV-KVVEGVTYINDSKATNVNSVYFALDTIKT-PIVWIVGGQDK------GNDYNSLL-P 362
Query: 321 LNHHRCVITEC 331
H + C
Sbjct: 363 YVHQKVKAIVC 373
>gi|260899193|ref|ZP_05907588.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Vibrio
parahaemolyticus AQ4037]
gi|308107131|gb|EFO44671.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Vibrio
parahaemolyticus AQ4037]
Length = 437
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 147/320 (45%), Gaps = 47/320 (14%)
Query: 18 LACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGN 77
+ +L G V+ +++ A + + + +A+TG+NGKSTV G M G+ VGGN
Sbjct: 85 IQTVLAKGTPVVGDIELFAWAVNKPV--VAITGSNGKSTVTDLTGVMAKAAGLTVGVGGN 142
Query: 78 LGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK 137
+G P AL + + V+E+SS+Q+E + LNL+ DH++R++
Sbjct: 143 IGVP---------ALELLEQDVDLYVLELSSFQLET-TLSLKLKAAAFLNLSEDHMDRYE 192
Query: 138 TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTA 197
M +Y K +F H +L ++ +Q ++ P V ++ +
Sbjct: 193 GMADYRAAKLRIFDH---AELAVVNRDDQETYPEVE-----------MPVVTFGSDEQAY 238
Query: 198 SFEVPAVGVVSQLQLH--------NMKVMGRHNYHNAAV--AALSVLGLDIGVDVEALNS 247
EV G + L H +K++G+HN NA V A L G+D + AL +
Sbjct: 239 GLEVD--GSRTWLLDHGQRVIASDELKLVGKHNLANALVVLALLKAAGVDYHNALNALKN 296
Query: 248 TIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGH-KCVILLGGQAKVL 306
+ HR Q+V D +GV WV+DSKATN+ +T L L+ K +L+GG K
Sbjct: 297 YTGL----THRCQVV-ADNRGVKWVNDSKATNIASTMAALSGLESTGKLYLLVGGVGK-- 349
Query: 307 NGQESNGFEKLIEPLNHHRC 326
G + + + LN C
Sbjct: 350 -GADFTPLKPIFATLNLQLC 368
>gi|449916121|ref|ZP_21796673.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans 15JP3]
gi|449155612|gb|EMB59117.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans 15JP3]
Length = 451
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 149/294 (50%), Gaps = 29/294 (9%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V++E++ A + I+ +TG+NGK+T T + +LNH G A + GN+G P SE
Sbjct: 99 VITEVELAYLI--SEAPIIGITGSNGKTTTTTMIADVLNHAGQSARLSGNIGFPASE--- 153
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
+A P ++ + V+E+SS+Q+ + + F P ++V+ NL P H++ H + +NY K
Sbjct: 154 --VAQPVTEK--DILVMELSSFQL-MGTESFHPHMAVITNLMPTHIDYHGSFENYIEAKW 208
Query: 148 HLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDT---EAKTASFEVPAV 204
++ +M +L F NQ L + + ++ I K+D + + F+ A+
Sbjct: 209 NIQKNMTEKDFLVLNF-NQDLAKDL-ANQTQAKIIPFSTKEKVDGAYLDGQMLCFKGQAI 266
Query: 205 GVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHR 264
S+L V G HN N A+A ++V L GV E + T+ HR+Q +
Sbjct: 267 MSASEL-----GVPGSHNVEN-ALATIAVAKLS-GVSNETIRETLIHFGGVKHRLQSLG- 318
Query: 265 DIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
+I GV + +DSK+TN+ AT L K +++ GG + N F++L+
Sbjct: 319 NIAGVKFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------GNEFDELV 366
>gi|290580950|ref|YP_003485342.1| D-glutamic acid adding enzyme [Streptococcus mutans NN2025]
gi|449969786|ref|ZP_21813428.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans 2VS1]
gi|450028366|ref|ZP_21832104.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans G123]
gi|450092748|ref|ZP_21856220.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans W6]
gi|450149397|ref|ZP_21876104.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans 14D]
gi|450165907|ref|ZP_21882077.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans B]
gi|254997849|dbj|BAH88450.1| putative D-glutamic acid adding enzyme [Streptococcus mutans
NN2025]
gi|449173898|gb|EMB76430.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans 2VS1]
gi|449195779|gb|EMB97088.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans G123]
gi|449217996|gb|EMC18022.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans W6]
gi|449234505|gb|EMC33510.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans 14D]
gi|449240257|gb|EMC38944.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans B]
Length = 451
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 149/294 (50%), Gaps = 29/294 (9%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V++E++ A + I+ +TG+NGK+T T + +LNH G A + GN+G P SE
Sbjct: 99 VITEVELAYLI--SEAPIIGITGSNGKTTTTTMIADVLNHAGQSARLSGNIGFPASE--- 153
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
+A P ++ + V+E+SS+Q+ + + F P ++V+ NL P H++ H + +NY K
Sbjct: 154 --VAQPVTEK--DILVMELSSFQL-MGTESFHPHMAVITNLMPTHIDYHGSFENYIEAKW 208
Query: 148 HLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDT---EAKTASFEVPAV 204
++ +M +L F NQ L + + ++ I K+D + + F+ A+
Sbjct: 209 NIQKNMTEKDFLVLNF-NQDLAKDL-ANQTQTKIIPFSTKEKVDGAYLDGQMLCFKGQAI 266
Query: 205 GVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHR 264
S+L V G HN N A+A ++V L GV E + T+ HR+Q +
Sbjct: 267 MSASEL-----GVPGSHNVEN-ALATIAVAKLS-GVSNETIRETLIHFGGVKHRLQSLG- 318
Query: 265 DIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
+I GV + +DSK+TN+ AT L K +++ GG + N F++L+
Sbjct: 319 NIAGVKFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------GNEFDELV 366
>gi|388600435|ref|ZP_10158831.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Vibrio
campbellii DS40M4]
Length = 437
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 152/321 (47%), Gaps = 49/321 (15%)
Query: 18 LACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGN 77
+ +L G V+ +++ A + + + +A+TG+NGKSTV G M G+ VGGN
Sbjct: 85 IQAVLAKGTPVVGDIELFAWAVDKPV--IAITGSNGKSTVTDLTGVMAKAAGLTVGVGGN 142
Query: 78 LGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK 137
+G P AL + + V+E+SS+Q+E + + LNL+ DH++R++
Sbjct: 143 IGVP---------ALDLLEQDADLYVLELSSFQLETTSSLKLK-AAAFLNLSEDHMDRYE 192
Query: 138 TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTA 197
M +Y K +F N +L ++ N+ E +L G+ D +A
Sbjct: 193 GMSDYRQAKLRIFD---NAELAVV---NRDDQETFPDTETSLVTFGS------DEQA--- 237
Query: 198 SFEVPAVGVVSQLQLH--------NMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTI 249
+ + A G + L H +K++G+HN N AL VL L DV+ + ++
Sbjct: 238 -YGLEADGNRTWLLDHGQRVIASDELKLVGKHNLAN----ALVVLALLKAADVD-YHKSL 291
Query: 250 EILRTP---PHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGH-KCVILLGGQAKV 305
L+T HR Q+V D +GV WV+DSKATN+ +T L L+ K +L+GG K
Sbjct: 292 NALKTYTGLTHRCQVV-ADNRGVKWVNDSKATNIASTMAALSGLESTGKLYLLVGGVGK- 349
Query: 306 LNGQESNGFEKLIEPLNHHRC 326
G + + + LN C
Sbjct: 350 --GADFTPLKPIFATLNLQIC 368
>gi|406885658|gb|EKD32808.1| hypothetical protein ACD_76C00143G0002 [uncultured bacterium]
Length = 476
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 125/269 (46%), Gaps = 11/269 (4%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+AVTGT GKS+ +++ M + + + V GN+ E + + P ++
Sbjct: 131 IIAVTGTKGKSSTSSWIFDMCSRMDPKTIVAGNIKVSPLEYLDDLLNDTKTHP----VIL 186
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFG 164
E+SS Q+E P + V++N+ PDHL RH+TMK Y K +F + + +L +
Sbjct: 187 ELSSSQLETLESSRAPEIGVLINIYPDHLNRHRTMKAYINAKMLIFKNQTKDQSAILNWD 246
Query: 165 NQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQL--QLHNMKVMGRHN 222
Q++ E K W V+ + V +G ++ + ++ + G HN
Sbjct: 247 QQNVRELAKALNGKCYWFSTHEEVEQGAFVRDGKI-VLRIGKAEEIITSVASIGLFGEHN 305
Query: 223 YHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEA 282
NA +A V GV E + ++IE P R +I+ R +G+ +V+D+ AT +A
Sbjct: 306 LSNALASA--VAARLAGVSAEHIRASIEQFAGIPDRQEIL-RSWEGIVFVNDTTATQPDA 362
Query: 283 TCTGLMDLKGHKCVILL-GGQAKVLNGQE 310
+ +ILL GG +K L +E
Sbjct: 363 AIAAIKRFAKENNIILLAGGASKKLPMEE 391
>gi|294793907|ref|ZP_06759044.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Veillonella sp.
3_1_44]
gi|294455477|gb|EFG23849.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Veillonella sp.
3_1_44]
Length = 456
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 147/288 (51%), Gaps = 27/288 (9%)
Query: 25 GKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSE 84
G V+SE++ A +V I+AVTGTNGK+T T + ++L G VGGN+G+ LSE
Sbjct: 92 GIDVVSEVELAYEV--SKSPIVAVTGTNGKTTTTTLLTKVLEGSGKPVHVGGNIGDSLSE 149
Query: 85 AAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYAL 144
A+ S P V E+SSYQ+E K+F P +++LN+TPDHL RHKTM+NY
Sbjct: 150 VAY-------SMPADGFLVAELSSYQLETI-KHFRPIGAIILNITPDHLARHKTMENYIA 201
Query: 145 TKCHLFSHMVNTKLGLLPFGN---QHLNEAIKGHRFNLAWIGAFP--GVKIDTEAKTASF 199
K +F + ++T +L + + H ++ A D + A
Sbjct: 202 AKERIFENQLSTDYLVLNIDDPVVADMEHRAPSHILKISQKKAVENGAYYADGQCYIAKD 261
Query: 200 EVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLD--IGVDVEALNSTIEILRTPPH 257
V A V++ +H + G HN N L+V+ L +GV VE ++ I H
Sbjct: 262 GV-AKFVIADEDIH---IPGSHNIEN----ILTVIALSHALGVPVETIHRIISEFHGVEH 313
Query: 258 RMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKV 305
R++ V + I G+T+ +DSKATN+++ L + ++L GG K+
Sbjct: 314 RLERV-KTIDGITFYNDSKATNVDSVVKALESFD-QQVILLAGGHDKM 359
>gi|228476841|ref|ZP_04061486.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
salivarius SK126]
gi|228251415|gb|EEK10560.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
salivarius SK126]
Length = 450
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 92/308 (29%), Positives = 144/308 (46%), Gaps = 37/308 (12%)
Query: 18 LACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGN 77
+A L+ G V +E++ A V I+ +TG+NGK+T T + +LNH G + GN
Sbjct: 89 VARALEKGIPVWTEVELAYLV--SEAPIIGITGSNGKTTTTTMIADVLNHGGKSGVLSGN 146
Query: 78 LGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK 137
+G P SE A A + V+E+SS+Q+ + F P ++V+ NL P H++ H
Sbjct: 147 IGFPASEVAQSVTAQDT-------LVMELSSFQL-MGIDSFHPHIAVITNLMPTHIDYHG 198
Query: 138 TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGV-KIDTEAKT 196
+ + Y K ++ + M +L F NQ L + + A + F V K+D
Sbjct: 199 SFEEYVAAKWNIQNQMTADDFVVLNF-NQDLAKELATQ--TKAQVVPFSTVEKVD----G 251
Query: 197 ASFEVPAVGVVSQL--QLHNMKVMGRHNYHNA----AVAALSVLGLDIGVDVEALNSTIE 250
A E + +L Q + V G HN NA AVA LS G+ +A+ T+
Sbjct: 252 AYLENGGLYFKGELVMQADEIGVPGSHNVENALATIAVAKLS------GISNQAIKETLA 305
Query: 251 ILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQE 310
HR+Q V I V + +DSK+TN+ AT L K +++ GG +
Sbjct: 306 SFGGVKHRLQFVDT-IDEVKFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------ 358
Query: 311 SNGFEKLI 318
N F++LI
Sbjct: 359 GNEFDELI 366
>gi|410658123|ref|YP_006910494.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Dehalobacter sp.
DCA]
gi|410661113|ref|YP_006913484.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Dehalobacter sp.
CF]
gi|409020478|gb|AFV02509.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Dehalobacter sp.
DCA]
gi|409023469|gb|AFV05499.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Dehalobacter sp.
CF]
Length = 455
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 130/276 (47%), Gaps = 30/276 (10%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I +TG+NGK+T T VG++ G E V GN+G L H + + V
Sbjct: 109 IAGITGSNGKTTTTTLVGELAKETGREMVVAGNIGLALCGQVEHL-------DQNGIIVA 161
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFG 164
E+SS+Q+E+ N+ +++ LNLTPDHL+RH +++ YA K + + L +L +
Sbjct: 162 ELSSFQLELINRTRV-NIAIFLNLTPDHLDRHGSLEKYAAAKARILENQTEQDLAILNWD 220
Query: 165 NQHLNEAIKGHRFNLAWIGA---FP-GVKIDTE----AKTASFEVPAVGVVSQLQLHNMK 216
+ + E + + + P G+ ++ E K S +G +
Sbjct: 221 DPIVKELAAKAKARVVFFSLKENLPDGICLNGEDIVLKKDHSVAATIIG------RRELL 274
Query: 217 VMGRHNYHN--AAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDD 274
+ G HN N AAVAA L+ G+D+ + + + HR +IV R V +++D
Sbjct: 275 LRGGHNLENVMAAVAA----ALEFGLDISKIADVLRHFQPVKHRQEIVGR-FDNVLYIND 329
Query: 275 SKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQE 310
SK TN +++ L + V++ GG+ K L+ E
Sbjct: 330 SKGTNPDSSIKALQSYE-EPIVLIAGGKNKGLDMTE 364
>gi|419522826|ref|ZP_14062408.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA13723]
gi|379559304|gb|EHZ24333.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA13723]
Length = 434
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 146/297 (49%), Gaps = 23/297 (7%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L G V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 77 LAKGIPVLTEVELAYLI--SEAPIIGITGSNGKTTTTTMIGEVLTAAGQHGLLSGNIGYP 134
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A + S K V+E+SS+Q+ + + F P ++V+ NL P H++ H +
Sbjct: 135 ASQVA----QIASDKDTL---VMELSSFQL-MGVQEFHPEIAVITNLMPTHIDYHGLFEE 186
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEV 201
Y K ++ + M +L F NQ L + + A + F ++ A ++
Sbjct: 187 YVAAKWNIQNKMTAADFLVLNF-NQDLVKDLASK--TEATVVPFSTLEKVDGAYLEDGQL 243
Query: 202 PAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQI 261
G V + + + V G HN N A+A ++V L GVD + + T+ HR+Q
Sbjct: 244 YFRGEVV-MAANEIGVPGSHNVEN-ALATIAVAKLR-GVDNQTIKETLSAFGGVKHRLQF 300
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
V DI+GV + +DSK+TN+ AT L K V++ GG + N F++L+
Sbjct: 301 VD-DIKGVKFYNDSKSTNILATQKALSGFDNSKVVLIAGGLDR------GNEFDELV 350
>gi|309799972|ref|ZP_07694172.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
infantis SK1302]
gi|308116371|gb|EFO53847.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
infantis SK1302]
Length = 450
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 144/300 (48%), Gaps = 29/300 (9%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L+ G V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LEKGIPVLTEVELAYLI--SDAPIVGITGSNGKTTTTTMIGEVLTAAGQNGLLSGNIGYP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A + V+E+SS+Q+ + + F P ++V+ NL P H++ H + +
Sbjct: 151 ASQVA-------QTATDKDTLVMELSSFQL-MGIQEFHPEIAVITNLMPTHIDYHGSFEA 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDT---EAKTAS 198
Y K ++ S+M +L F NQ L + + + N + K+D E
Sbjct: 203 YVAAKWNIQSNMTAADYLVLNF-NQELAKEL-ATKTNATVVPFSTLEKVDGAYLEDGLLY 260
Query: 199 FEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHR 258
F V + + V G HN N A+A ++V L GVD E + T+ HR
Sbjct: 261 FRGEKV-----MAADEIGVPGSHNVEN-ALATIAVAKLR-GVDNEIIKETLSAFGGVKHR 313
Query: 259 MQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
+Q V + I GV + +DSK+TN+ AT L K +++ GG + N F++L+
Sbjct: 314 LQFVDQ-INGVKFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------GNEFDELV 366
>gi|405760874|ref|YP_006701470.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae SPNA45]
gi|404277763|emb|CCM08311.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae SPNA45]
Length = 450
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 146/297 (49%), Gaps = 23/297 (7%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L G V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LAKGIPVLTEVELAYLI--SEAPIIGITGSNGKTTTTTMIGEVLTAAGQHGLLSGNIGYP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A + S K V+E+SS+Q+ + + F P ++V+ NL P H++ H +
Sbjct: 151 ASQVA----QIASDKDTL---VMELSSFQL-MGVQEFHPEIAVITNLMPTHIDYHGLFEE 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEV 201
Y K ++ + M +L F NQ L + + A + F ++ A ++
Sbjct: 203 YVAAKWNIQNKMTAADFLVLNF-NQDLVKDLASK--TEATVVPFSTLEKVDGAYLEDGQL 259
Query: 202 PAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQI 261
G V + + + V G HN N A+A ++V L GVD + + T+ HR+Q
Sbjct: 260 YFRGEVV-MAANEIGVPGSHNVEN-ALATIAVAKLR-GVDNQTIKETLSAFGGVKHRLQF 316
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
V DI+GV + +DSK+TN+ AT L K V++ GG + N F++L+
Sbjct: 317 VD-DIKGVKFYNDSKSTNILATQKALSGFDNSKVVLIAGGLDR------GNEFDELV 366
>gi|306829146|ref|ZP_07462336.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Streptococcus
mitis ATCC 6249]
gi|304428232|gb|EFM31322.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Streptococcus
mitis ATCC 6249]
Length = 450
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 150/311 (48%), Gaps = 31/311 (9%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L G V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LAKGIPVLTEVELAYLI--SEAPIIGITGSNGKTTTTTMIGEVLTAAGQRGLLSGNIGYP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A A + V+E+SS+Q+ + + F P ++V+ NL P H++ H + +
Sbjct: 151 ASQVAQTATAKDT-------LVMELSSFQL-MGVQEFHPEIAVITNLMPTHIDYHGSFEE 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGV-KIDT---EAKTA 197
Y K ++ + M +L F NQ L + + A + F + K+D E
Sbjct: 203 YVAAKWNIQNKMTAADFLVLNF-NQDLAKELATK--TQATVVPFSTLEKVDGAYLEDGQL 259
Query: 198 SFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPH 257
F V S++ V G HN N A+A ++V L GVD + + T+ H
Sbjct: 260 YFRGEVVMAASEI-----GVPGSHNVEN-ALATIAVAKLR-GVDNQTIKETLSAFGGVKH 312
Query: 258 RMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKL 317
R+Q V +I+G+ + +DSK+TN+ AT L K +++ GG + N F++L
Sbjct: 313 RLQFVD-EIKGIKFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------GNEFDEL 365
Query: 318 IEPLNHHRCVI 328
+ + + ++
Sbjct: 366 VPDITGLKRIV 376
>gi|297616979|ref|YP_003702138.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Syntrophothermus
lipocalidus DSM 12680]
gi|297144816|gb|ADI01573.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Syntrophothermus
lipocalidus DSM 12680]
Length = 456
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 141/288 (48%), Gaps = 20/288 (6%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
++++G V+ E++ A + +++I+A+TGTNGK+T FV ++L+ G+ GN+G
Sbjct: 88 VIEAGTPVIGEIELAYHLKNDAVEIVAITGTNGKTTTTAFVAEILDKSGVNTAACGNIGV 147
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMK 140
PL + + V VEVSS+Q+E + F P V+ VLN+TPDHL+RH TM+
Sbjct: 148 PLISVI--------DEIEHGVVSVEVSSFQLETI-REFHPRVAAVLNITPDHLDRHGTME 198
Query: 141 NYALTKCHLFSHMVNTKLGLLPFGN---QHLNEAIKGHRFNLAWIGAFP-GVKIDTEAKT 196
Y K + S+ +L + + + L K + P GV ++
Sbjct: 199 QYVEAKAKILSNQGPDDFSVLNYEDAWVRRLKTEAKSQVIFFSTARRLPRGVYVEDGKIK 258
Query: 197 ASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPP 256
A V + + N+ + G HN N A + L GV + + T+ +
Sbjct: 259 ARLYDDEVVICPR---ENVALRGEHNLENVLCAVGIAIAL--GVKPDTIADTLRSFKGVR 313
Query: 257 HRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
HR++ V R + GV +V+DSK TN E+T L + +++ GG+ K
Sbjct: 314 HRLEEVRR-VNGVLYVNDSKGTNPESTIKALQAFQ-EPVILIAGGRNK 359
>gi|149020325|ref|ZP_01835217.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
pneumoniae SP23-BS72]
gi|418102404|ref|ZP_12739480.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae NP070]
gi|419475080|ref|ZP_14014921.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA14688]
gi|419486191|ref|ZP_14025958.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA44128]
gi|421208522|ref|ZP_15665547.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae 2070005]
gi|421224541|ref|ZP_15681287.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae 2070768]
gi|421233699|ref|ZP_15690321.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae 2061617]
gi|421240257|ref|ZP_15696806.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae 2080913]
gi|421249004|ref|ZP_15705467.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae 2082239]
gi|147930627|gb|EDK81609.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
pneumoniae SP23-BS72]
gi|353776570|gb|EHD57045.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae NP070]
gi|379561418|gb|EHZ26435.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA14688]
gi|379589100|gb|EHZ53940.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA44128]
gi|395576992|gb|EJG37546.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae 2070005]
gi|395591877|gb|EJG52172.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae 2070768]
gi|395602596|gb|EJG62738.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae 2061617]
gi|395609815|gb|EJG69900.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae 2080913]
gi|395615633|gb|EJG75649.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae 2082239]
Length = 450
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 146/297 (49%), Gaps = 23/297 (7%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L G V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LAKGIPVLTEVELAYLI--SEAPIIGITGSNGKTTTTTMIGEVLTAAGQHGLLSGNIGYP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A + S K V+E+SS+Q+ + + F P ++V+ NL P H++ H +
Sbjct: 151 ASQVA----QIASDKDTL---VMELSSFQL-MGVQEFHPEIAVITNLMPTHIDYHGLFEE 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEV 201
Y K ++ + M +L F NQ L + + A + F ++ A ++
Sbjct: 203 YVAAKWNIQNKMTAADFLVLNF-NQDLVKDLASK--TEATVVPFSTLEKVDGAYLEDGQL 259
Query: 202 PAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQI 261
G V + + + V G HN N A+A ++V L GVD + + T+ HR+Q
Sbjct: 260 YFRGEVV-MAANEIGVPGSHNVEN-ALATIAVAKLR-GVDNQTIKETLSAFGGVKHRLQF 316
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
V DI+GV + +DSK+TN+ AT L K V++ GG + N F++L+
Sbjct: 317 VD-DIKGVKFYNDSKSTNILATQKALSGFDNSKVVLIAGGLDR------GNEFDELV 366
>gi|421487907|ref|ZP_15935305.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
oralis SK304]
gi|400369869|gb|EJP22866.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
oralis SK304]
Length = 450
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 147/301 (48%), Gaps = 31/301 (10%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L G V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LAKGIPVLTEVELAYLI--SEAPIIGITGSNGKTTTTTMIGEVLTAAGQHGLLSGNIGYP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A A + V+E+SS+Q+ + + F P ++V+ NL P H++ H + +
Sbjct: 151 ASQVAQTATAKDT-------LVMELSSFQL-MGVQEFHPEIAVITNLMPTHIDYHGSFEA 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGV-KIDT---EAKTA 197
Y K ++ ++M +L F NQ L + + A + F + KID E
Sbjct: 203 YVAAKWNIQNNMTAADFLVLNF-NQDLAKELATK--TQATVVPFSTLEKIDGAYLEDGQL 259
Query: 198 SFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPH 257
F V S++ V G HN N A+A ++V L GVD + + T+ H
Sbjct: 260 YFRGEVVMAASEI-----GVPGSHNVEN-ALATIAVAKLR-GVDNQTIKETLSAFGGVKH 312
Query: 258 RMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKL 317
R+Q V +I+GV + +DSK+TN+ AT L K +++ GG + N F++L
Sbjct: 313 RLQFVD-EIKGVKFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------GNEFDEL 365
Query: 318 I 318
+
Sbjct: 366 V 366
>gi|418134424|ref|ZP_12771282.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA11426]
gi|353903014|gb|EHE78540.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA11426]
Length = 450
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 146/297 (49%), Gaps = 23/297 (7%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L G V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LAKGIPVLTEVELAYLI--SEAPIIGITGSNGKTTTTTMIGEVLTAAGQHGLLSGNIGYP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A + S K + V+E+SS+Q+ + + F P ++V+ NL P H++ H
Sbjct: 151 ASQVA----QIASDK---DMLVMELSSFQL-MGVQEFHPEIAVITNLMPTHIDYHGLFSE 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEV 201
Y K ++ + M +L F NQ L + + A + F ++ A ++
Sbjct: 203 YVAAKWNIQNKMTAADFLVLNF-NQDLAKDLTSK--TEATVVPFSTLEKVDGAYLEDGQL 259
Query: 202 PAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQI 261
G V + + + V G HN N A+A ++V L GVD + + T+ HR+Q
Sbjct: 260 YFRGEVV-MAANEIGVPGSHNVEN-ALATIAVAKLR-GVDNQTIKETLSAFGGVKHRLQF 316
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
V DI+GV + +DSK+TN+ AT L K V++ GG + N F++L+
Sbjct: 317 VD-DIKGVKFYNDSKSTNILATQKALSGFDNSKVVLIAGGLDR------GNEFDELV 366
>gi|300774444|ref|ZP_07084307.1| UDP-N-acetylmuramoylalanine--D-glutamateligase [Chryseobacterium
gleum ATCC 35910]
gi|300506259|gb|EFK37394.1| UDP-N-acetylmuramoylalanine--D-glutamateligase [Chryseobacterium
gleum ATCC 35910]
Length = 445
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 148/298 (49%), Gaps = 27/298 (9%)
Query: 14 KATGLACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAF 73
KA ++ + + G R+ SE++FA++ KI+A+TG+NGK+T + + +L + G+
Sbjct: 74 KADIISKIHEKGIRLSSEIEFASEFTD--AKIIAITGSNGKTTTTSLIYYILKNDGLNVG 131
Query: 74 VGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQM-EIPNKYFCPTVSVVLNLTPDH 132
+GGN+G + A + + V+EVSS+Q+ +I N F P +S++LNL+ DH
Sbjct: 132 LGGNIG--------YSFAKQVADENHEYYVLEVSSFQLDDIQN--FRPYISLLLNLSQDH 181
Query: 133 LERHK-TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKID 191
L+++ + YAL K + + N + ++ ++ I K+
Sbjct: 182 LDQYNYNYEEYALAKFRIAENQENDNFFIYNKDDEMSKNLLEKLEIKAKMIPFSTKEKLQ 241
Query: 192 TEAKTASFEVPAVGVVSQLQLHNMKV-----MGRHNYHNAAVAALSVLGLDIGVDVEALN 246
E+ VV +MKV +G HN N+ A S+ G + ++ E++
Sbjct: 242 EGGFVNEDEI----VVKMKDEFSMKVDELSLLGNHNVANSLAA--SIAGKILEINNESIR 295
Query: 247 STIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
++ + HR++ V +I GV +++DSKATN+ AT L +K V ++GG K
Sbjct: 296 HSLMTFQAVEHRLEFV-TEIDGVKYINDSKATNVNATYYALESMK-TPTVWIVGGLDK 351
>gi|332292531|ref|YP_004431140.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Krokinobacter sp.
4H-3-7-5]
gi|332170617|gb|AEE19872.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Krokinobacter sp.
4H-3-7-5]
Length = 445
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 150/300 (50%), Gaps = 30/300 (10%)
Query: 14 KATGLACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAF 73
KA + LL+ G V+SE++FA+Q +I + +TG+NGK+T G +L GI
Sbjct: 76 KAPIVQRLLEKGVAVISEIEFASQYTDATI--VGITGSNGKTTTTMLTGFILEQAGINLG 133
Query: 74 VGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQME-IPNKYFCPTVSVVLNLTPDH 132
V GN+G+ ++ ++ + V+E+SS+Q++ I + F P ++VVLN+TPDH
Sbjct: 134 VAGNIGDSYAKMV--------AQKEIDTYVLEISSFQLDGIAD--FAPHIAVVLNVTPDH 183
Query: 133 LERHK-TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKID 191
L+R+ +NY +K + + T + + + +K H + +D
Sbjct: 184 LDRYDYKFENYIASKFRIAMNQKETDYLIYDADDPVSVDWLKKHPVKSKLL----PFSLD 239
Query: 192 TEAKTASFEVPAVGVVSQLQ-------LHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEA 244
E + +F + + QL +N+ + G+HN N A+AA +V L + +
Sbjct: 240 KEFENGAF-IKDNNLTVQLNNNTFTMATNNLALKGQHNKKN-AMAASTVANL-LNIRKAT 296
Query: 245 LNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
+ ++E + HR++ V + I V +++DSKATN+ AT L D V ++GG K
Sbjct: 297 IRESLEGFQGVEHRLEQVLK-INNVQYINDSKATNVNATFYAL-DSMSEPTVWIVGGVDK 354
>gi|329848047|ref|ZP_08263075.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Asticcacaulis
biprosthecum C19]
gi|328843110|gb|EGF92679.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Asticcacaulis
biprosthecum C19]
Length = 475
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 150/325 (46%), Gaps = 41/325 (12%)
Query: 24 SGKRVMSELDFAAQVIPR-----SIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNL 78
+G +V+ +++ A+ + R K +A+TGTNGKST +G +L G VGGN+
Sbjct: 92 AGVQVLGDIELFARTLARFPARNRPKTVAITGTNGKSTTTALIGHILKSAGKNVHVGGNI 151
Query: 79 GNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKT 138
G + L +P V V+E SSYQ+++ + F P VS+++NL+PDHL+RH
Sbjct: 152 G-------IGVLDLDEMQPG-AVYVIETSSYQLDL-SLTFKPDVSILMNLSPDHLDRHGG 202
Query: 139 MKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIK----GHRFNLAWIGAFPGVKIDTEA 194
M Y K +F + + ++ + + + I H L I + V A
Sbjct: 203 MDGYIAAKKRIFMNQEKGQTAVIGADDDYTADLISQMRVSHPVKLVAISSRRVVGDGVYA 262
Query: 195 KTAS-FEVPAVGVVSQLQLHNMKVM-GRHNYHNAAVAALSVLGLDIGVDVEALNSTIEI- 251
++ + L ++ + GRHN+ N A A + L + N I +
Sbjct: 263 LNGELYDASGERARHIIDLKTVRTLTGRHNWQNGAAAFAACKALGL------TNEQIAVG 316
Query: 252 LRTPP---HRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNG 308
+R+ P HRMQ + R I V +++DSKATN +A + K + GG+AK
Sbjct: 317 MRSFPGLAHRMQEIGR-IGKVRFINDSKATNADAARQAMSSF--DKFFWIAGGKAK---- 369
Query: 309 QESNGFEKLIE--PLNHHRCVITEC 331
+ G ++L + P H +I E
Sbjct: 370 --AGGIDELRDLYPRIKHAFLIGEA 392
>gi|291288105|ref|YP_003504921.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Denitrovibrio
acetiphilus DSM 12809]
gi|290885265|gb|ADD68965.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Denitrovibrio
acetiphilus DSM 12809]
Length = 416
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 86/280 (30%), Positives = 131/280 (46%), Gaps = 36/280 (12%)
Query: 30 SELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHC 89
SE++ A P ++AVTGTNGKSTV T + Q+L G+EA GN+G P +EA
Sbjct: 70 SEIELADAKRPTDTVVVAVTGTNGKSTVTTLIAQILKKCGLEAVACGNIGLPYAEAV--- 126
Query: 90 IALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHL 149
+ + VVE+SS+Q + ++F VV NL DH++R++ M +YA
Sbjct: 127 -----TGGAYGAYVVELSSFQTGML-QHFSADCVVVTNLAEDHMDRYRDMDDYA------ 174
Query: 150 FSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPG--VKIDTEAKTASFEVPAVGVV 207
+ K+ LL F I+ + + + G V++ E +
Sbjct: 175 -----DDKMNLLRFLKPEGRLIIENDEYLVQKSSVYKGDTVRVLPEVNNGRLDFGHFYCT 229
Query: 208 SQLQLHNMKVMGRHNYHN---AAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHR 264
+ + G HN N A +AA S+ GL+ DV L + L HR +
Sbjct: 230 TD----KFPLKGEHNLLNLSFALLAADSIAGLE--GDVTYLTENLIGLE---HRCEFA-A 279
Query: 265 DIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
+I GV +++DSK TN+ +T T L L VI+LGG+ K
Sbjct: 280 EINGVEYINDSKGTNIHSTLTALKGLP-EGIVIILGGKDK 318
>gi|398937643|ref|ZP_10667352.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Pseudomonas sp.
GM41(2012)]
gi|398166760|gb|EJM54851.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Pseudomonas sp.
GM41(2012)]
Length = 448
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 141/287 (49%), Gaps = 39/287 (13%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+A++G+N KSTV T VG+M G VGGNLG P AL ++ V+
Sbjct: 111 IVAISGSNAKSTVTTLVGEMAAAAGKRVAVGGNLGTP---------ALDLLSDDVELYVM 161
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLF----SHMVNTKLGL 160
E+SS+Q+E ++ V+ VLN++ DH++R+ + Y L K +F +VN + L
Sbjct: 162 ELSSFQLETTDQ-LNAEVATVLNVSEDHMDRYSGLPAYHLAKHRIFRGARQFVVNRQDAL 220
Query: 161 LPFGNQHLNEAIKGHRFNLAW--IGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVM 218
+ E F L+ AF G++ + K +FE + + + +K+
Sbjct: 221 ---SRPLIGEGQPCWTFGLSKPDFKAF-GIREEDGEKYLAFEFQNL-----MPVRELKIR 271
Query: 219 GRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKAT 278
G HN NA A G +G+ +A+ S++ HR Q V RD+ GV++ +DSKAT
Sbjct: 272 GAHNQSNALAALAL--GHAVGLPFDAMLSSLRTFAGLEHRCQWV-RDLNGVSYYNDSKAT 328
Query: 279 NLEATCTGL----MDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPL 321
N+ A + D+ G K V++ GG K G E F+ L +P+
Sbjct: 329 NVGAALAAIEGLGADIDG-KLVLIAGGDGK---GAE---FKDLRDPV 368
>gi|445375284|ref|ZP_21426475.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
thermophilus MTCC 5460]
gi|445389770|ref|ZP_21428191.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
thermophilus MTCC 5461]
gi|444750258|gb|ELW75085.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
thermophilus MTCC 5461]
gi|444750366|gb|ELW75184.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
thermophilus MTCC 5460]
Length = 450
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 86/281 (30%), Positives = 134/281 (47%), Gaps = 35/281 (12%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+ +TG+NGK+T T + +LNH G + GN+G P SE A S V+
Sbjct: 114 IIGITGSNGKTTTTTMIADVLNHGGKSGVLSGNIGFPASEVA-------QSVTNQDTLVM 166
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFG 164
E+SS+Q+ + + F P ++V+ NL P H++ H + + Y K ++ + M + +L F
Sbjct: 167 ELSSFQL-MGIESFHPHIAVITNLMPTHIDYHGSFEEYIAAKWNIQNEMTSDDFIILNF- 224
Query: 165 NQHLNEAIKGHRFNLAWIGAFPGV-KIDTEAKTASFEVPAVGVVSQLQLH--NMKVMGRH 221
NQ L + + A + F V K+D A E + +L +H + V G H
Sbjct: 225 NQDLAKELATQTN--AQVVPFSTVEKVD----GAYLENGGLYFKGELLMHADELGVPGSH 278
Query: 222 NYHNA----AVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKA 277
N NA AVA LS GV +A+ T+ HR+Q V I V + +DSK+
Sbjct: 279 NVENALATIAVAKLS------GVSNQAIKETLSSFGGVKHRLQFVDT-IDDVKFYNDSKS 331
Query: 278 TNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
TN+ AT L K +++ GG + N F++LI
Sbjct: 332 TNILATQKALSGFDNSKVILIAGGLDR------GNEFDELI 366
>gi|300774251|ref|ZP_07084118.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
[Sphingobacterium spiritivorum ATCC 33861]
gi|300758930|gb|EFK55759.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
[Sphingobacterium spiritivorum ATCC 33861]
Length = 457
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 143/297 (48%), Gaps = 30/297 (10%)
Query: 18 LACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGN 77
+ L Q G V+ E++FAAQ + ++ +TG+NGKST +L G+ + GN
Sbjct: 90 VVALKQKGIPVIGEIEFAAQYT--NARLYCITGSNGKSTTTMLTYYILQKAGVNVGLAGN 147
Query: 78 LGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDHLERH 136
+G AL ++ KF V V+E+SS+ ++ + Y F V+V+LN+TPDHL+R+
Sbjct: 148 IG--------RSFALQVAQEKFDVYVLEISSFMLD--DMYQFRADVAVILNITPDHLDRY 197
Query: 137 K-TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLA-WIGA-----FPGVK 189
M+NY +K + + + ++ + ++ H A W PG
Sbjct: 198 DHKMENYVDSKFRMIRNQTANDYFIYCLDDEETVKGLERHHTEAAIWPMTQEQVINPGAY 257
Query: 190 IDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAAL--SVLGLDIGVDVEALNS 247
+D E K P G + ++ + G+HN +N A L V L E+++S
Sbjct: 258 LDQE-KNIIINTPK-GEQFIMNTEDLSLQGKHNVYNNMAAGLVAKVQELRNRSMQESMSS 315
Query: 248 TIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
+ I PHR++ V I GV +++DSKATN+ + L + V+++GG K
Sbjct: 316 YVNI----PHRLEHVAC-IGGVNYINDSKATNVNSVWYALESF-SPQIVLIMGGVDK 366
>gi|298377157|ref|ZP_06987111.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Bacteroides sp.
3_1_19]
gi|298266141|gb|EFI07800.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Bacteroides sp.
3_1_19]
Length = 445
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 154/318 (48%), Gaps = 31/318 (9%)
Query: 14 KATGLACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAF 73
KA + L + G ++SE++FA + K++ +TG+NGK+T +L G++
Sbjct: 76 KAPIIQLLKKQGTPIISEIEFAGRYTDS--KMICITGSNGKTTTTMLTYHILKEAGVDVG 133
Query: 74 VGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDH 132
+ GN+GN L AL ++ V V+E+SS+Q++ N Y F ++++LN+TPDH
Sbjct: 134 LAGNVGNSL--------ALQVAEDPHAVYVIELSSFQLD--NMYDFRADIAIILNITPDH 183
Query: 133 LERHK-TMKNYALTKCHLFSHMVNTKLGLLPFGNQH---LNEAIKGHRFNLAWIGAFP-- 186
L+R+ M+NY K + + TK F N E K H + A
Sbjct: 184 LDRYNYEMQNYVDAKFRILQNQ--TKDDAFIFWNDDPIIAREIAKRHPEATLYPFAETYE 241
Query: 187 -GVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEAL 245
GVK TE E V ++ + + G HN +N+ + ++ +DI E +
Sbjct: 242 NGVKGYTENNQVVIET--VNGTFTMEQDLLALTGTHNLYNSLASGIASKIVDIH--DEKI 297
Query: 246 NSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKV 305
+++ HR++ V R ++GV +++DSKATN+ + L + V++LGG K
Sbjct: 298 RASLSDFTGVEHRLEKVLR-VRGVDYINDSKATNVNSCWYALQSMTT-PVVLILGGTDK- 354
Query: 306 LNGQESNGFEKLIEPLNH 323
G + + E+L+ H
Sbjct: 355 --GNDYSEIEELVNKKVH 370
>gi|298372208|ref|ZP_06982198.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Bacteroidetes
oral taxon 274 str. F0058]
gi|298275112|gb|EFI16663.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Bacteroidetes
oral taxon 274 str. F0058]
Length = 468
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 148/323 (45%), Gaps = 40/323 (12%)
Query: 18 LACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGN 77
+ L + G V+SE++FA + + K + +TG+NGK+T +L + G + GN
Sbjct: 90 IKSLREKGIPVISEIEFAGRYT--NAKTICITGSNGKTTTTMLTYHILRNAGYNVGLAGN 147
Query: 78 LGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK 137
+G A+ ++ F ++E+SS+Q++ F ++++ N+TPDHL+R+
Sbjct: 148 VGKSF--------AMQVAEDNFDYYILEISSFQLD-GMYSFRADIAIITNITPDHLDRYD 198
Query: 138 -TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKT 196
+NY +K + + + G+ + I+ ++ KI + +
Sbjct: 199 YKFQNYVDSKFRILQNQTENDFFIFWAGDSTVANEIEKRGTSI------KARKIPFDLTS 252
Query: 197 ASFEVPAVGVVS---------------QLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVD 241
+ VP V +++ +N+ + G HN +N+ A L+ GV
Sbjct: 253 QTDNVPNYAFVDGKDIIFNNLTNKLFLEMETNNLPLKGNHNLYNSMAAGLA--SQVAGVS 310
Query: 242 VEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGG 301
+A+ ++E HRM+ V ++GV +++DSKATN+ + L + V++LGG
Sbjct: 311 KDAIRRSLETFEGVEHRMEYVAT-VRGVRYINDSKATNVNSCWYALQSMT-TPVVLILGG 368
Query: 302 QAKVLNGQESNGFEKLIEPLNHH 324
K G + + +L+ HH
Sbjct: 369 TDK---GNDYSDISELVSDRVHH 388
>gi|410096278|ref|ZP_11291266.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Parabacteroides
goldsteinii CL02T12C30]
gi|409226615|gb|EKN19522.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Parabacteroides
goldsteinii CL02T12C30]
Length = 444
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 153/313 (48%), Gaps = 29/313 (9%)
Query: 14 KATGLACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAF 73
KA + L G ++SE++FA + K++ +TG+NGK+T +L G++
Sbjct: 75 KAPIIQKLKAQGTHIISEIEFAGRYTDS--KMICITGSNGKTTTTMLTYHILKEAGLDVG 132
Query: 74 VGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDH 132
+ GN+GN L AL ++ V V+E+SS+Q++ N Y F ++++LN+TPDH
Sbjct: 133 LAGNVGNSL--------ALQVAEEPHAVYVIELSSFQLD--NMYDFKADIAILLNITPDH 182
Query: 133 LERHK-TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAF-----P 186
L+R+ M+NY K + + + + + + I R A + F
Sbjct: 183 LDRYNYEMQNYVDAKFRIIQNQTSEDAFIFWNDDPIIAREI-AKRHPAATLYPFAETHED 241
Query: 187 GVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALN 246
GVK T+ K E L + + G HN +N+ + ++ +DI E +
Sbjct: 242 GVKGYTDNKQIVIETSNGTFTMDQDL--LALTGTHNLYNSLASGIASKVVDIH--DENIR 297
Query: 247 STIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVL 306
+++ HR++ V R ++GV +++DSKATN+ + L + K V++LGG K
Sbjct: 298 ASLSDFTGVEHRLEKVAR-VRGVDYINDSKATNVNSCWYALQSMTT-KLVLILGGTDK-- 353
Query: 307 NGQESNGFEKLIE 319
G + + E+L++
Sbjct: 354 -GNDYSEIEELVK 365
>gi|449875963|ref|ZP_21782523.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans S1B]
gi|449253351|gb|EMC51309.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans S1B]
Length = 451
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 151/300 (50%), Gaps = 29/300 (9%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L+ V++E++ A + I+ +TG+NGK+T T + +LNH G A + GN+G P
Sbjct: 93 LEKNIPVITEVELAYLI--SEAPIIGITGSNGKTTTTTMIADVLNHAGQSARLSGNIGFP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
SE +A P ++ + V+E+SS+Q+ + + F P ++V+ NL P H++ H + +N
Sbjct: 151 ASE-----VAQPVTEK--DILVMELSSFQL-MGTESFHPHMAVITNLMPTHIDYHGSFEN 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDT---EAKTAS 198
Y K ++ +M +L F NQ L + + ++ I K+D + +
Sbjct: 203 YIEAKWNIQKNMTEKDFLVLNF-NQDLAKDL-ANQTQAKIIPFSTKEKVDGAYLDGQMLC 260
Query: 199 FEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHR 258
F+ + S+L V G HN N A+A ++V L GV EA+ T+ HR
Sbjct: 261 FKGQVIMSASEL-----GVPGSHNVEN-ALATIAVAKLS-GVSNEAIRETLIHFGGVKHR 313
Query: 259 MQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
+Q + +I GV + +DSK+TN+ AT L K +++ GG + N F++L+
Sbjct: 314 LQSLG-NIAGVKFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------GNEFDELV 366
>gi|270292242|ref|ZP_06198456.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
sp. M143]
gi|270279288|gb|EFA25131.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
sp. M143]
Length = 450
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 149/308 (48%), Gaps = 24/308 (7%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L G V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LAKGIPVLTEVELAYLI--SEAPIVGITGSNGKTTTTTMIGEVLTAAGQRGLLSGNIGYP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A A + V+E+SS+Q+ + + F P ++V+ NL P H++ H + +
Sbjct: 151 ASQVAQTATAKDT-------LVMELSSFQL-MGVQEFHPEIAVITNLMPTHIDYHGSFEE 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEV 201
Y K ++ + M +L F NQ L + + A + F ++ A ++
Sbjct: 203 YVAAKWNIQNKMTAADFLVLNF-NQDLAKELATR--TQATVVPFSTLEKVDGAYLEDGQL 259
Query: 202 PAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQI 261
G V + + V G HN N A+A ++V L G+D + + T+ HR+Q
Sbjct: 260 YFRGEVI-MAADEIGVPGSHNVEN-ALATIAVAKLR-GIDNQIIKETLSAFGGVKHRLQF 316
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPL 321
V +IQGV + +DSK+TN+ AT L K +++ GG + N F++L+ +
Sbjct: 317 VD-EIQGVKFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------GNEFDELVPDI 369
Query: 322 NH-HRCVI 328
R VI
Sbjct: 370 TGLKRMVI 377
>gi|149010691|ref|ZP_01832062.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
pneumoniae SP19-BS75]
gi|418188918|ref|ZP_12825433.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA47373]
gi|419468563|ref|ZP_14008434.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA06083]
gi|147765172|gb|EDK72101.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
pneumoniae SP19-BS75]
gi|353856060|gb|EHE36029.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA47373]
gi|379546666|gb|EHZ11804.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA06083]
Length = 450
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 145/297 (48%), Gaps = 23/297 (7%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L G V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LAKGIPVLTEVELAYLI--SEAPIIGITGSNGKTTTTTMIGEVLTAAGQHGLLSGNIGYP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A S K V+E+SS+Q+ + + F P ++V+ NL P H++ H +
Sbjct: 151 ASQVAQTA----SDKDTL---VMELSSFQL-MGVQEFHPEIAVITNLMPTHIDYHGLFEE 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEV 201
Y K ++ + M +L F NQ L + + A + F ++ A ++
Sbjct: 203 YVAAKWNIQNKMTAADFLVLNF-NQDLAKDLTSK--TEATVVPFSTLEKVDGAYLEDGQL 259
Query: 202 PAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQI 261
G V + + + V G HN N A+A ++V L GVD + + T+ HR+Q
Sbjct: 260 YFRGEVV-MAANEIGVPGSHNVEN-ALATIAVAKLR-GVDNQTIKETLSAFGGVKHRLQF 316
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
V DI+GV + +DSK+TN+ AT L K V++ GG + N F++L+
Sbjct: 317 VD-DIKGVKFYNDSKSTNILATQKALSGFDNSKVVLIAGGLDR------GNEFDELV 366
>gi|315225589|ref|ZP_07867398.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Capnocytophaga
ochracea F0287]
gi|420159278|ref|ZP_14666085.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Capnocytophaga
ochracea str. Holt 25]
gi|314944406|gb|EFS96446.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Capnocytophaga
ochracea F0287]
gi|394762576|gb|EJF44795.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Capnocytophaga
ochracea str. Holt 25]
Length = 444
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 155/325 (47%), Gaps = 33/325 (10%)
Query: 14 KATGLACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAF 73
KA + + + G V+SE++FA+Q I + +TG+NGK+T + G++
Sbjct: 75 KAPIIKKVHEKGIAVISEIEFASQYTDSLI--VGITGSNGKTTTTLLTYHIFKEAGLQVG 132
Query: 74 VGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHL 133
+GGN+G +E + + P + V+E+SS+Q++ ++F P ++V+LN+TPDHL
Sbjct: 133 LGGNIGYSFAE------LVATENPPYY--VLEISSFQLD-GIEHFAPHIAVLLNITPDHL 183
Query: 134 ERHK-TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDT 192
+R+ +NY +K + + + ++ + + + H I I+
Sbjct: 184 DRYDYKFENYINSKFRIAMNQTENDYLIYDADDEVITQWLSTHTIKSKLI----PFSIEK 239
Query: 193 EAKTASF------EVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALN 246
E +F + +++ + + + G+HN N A SV + + +L
Sbjct: 240 ELPQGAFLKDNKIYIMLENQTTEIDVEEISLRGKHNIKNTMAA--SVAARLVNIRNNSLR 297
Query: 247 STIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVL 306
+++ + PHR++ V + + GVT+V+DSKATN+ + L +K V ++GGQ K
Sbjct: 298 ESLKGFKGAPHRLEEV-KVVDGVTYVNDSKATNVNSVFYALDTIK-TPIVWIVGGQDK-- 353
Query: 307 NGQESNGFEKLIEPLNHHRCVITEC 331
N + L+ P H + C
Sbjct: 354 ----GNDYNSLL-PYVHEKVRAIVC 373
>gi|256820163|ref|YP_003141442.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Capnocytophaga
ochracea DSM 7271]
gi|256581746|gb|ACU92881.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Capnocytophaga
ochracea DSM 7271]
Length = 444
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 151/316 (47%), Gaps = 33/316 (10%)
Query: 23 QSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPL 82
+ G V+SE++FA+Q I + +TG+NGK+T + G++ +GGN+G
Sbjct: 84 EKGIAVISEIEFASQYTDSLI--VGITGSNGKTTTTLLTYHIFKEAGLQVGLGGNIGYSF 141
Query: 83 SEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK-TMKN 141
+E + + P + V+E+SS+Q++ ++F P ++V+LN+TPDHL+R+ +N
Sbjct: 142 AE------LVATKNPPYY--VLEISSFQLD-GIEHFAPHIAVLLNITPDHLDRYDYKFEN 192
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASF-- 199
Y +K + + + ++ + + + H I I+ E +F
Sbjct: 193 YIDSKFRIAMNQTENDYLIYDADDEVITQWLSTHTIKSKLI----PFSIEKELPQGAFLK 248
Query: 200 ----EVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTP 255
+ +++ + + + G+HN N A SV + + +L +++ +
Sbjct: 249 DNKIYIMLENQTTEIDVEEISLRGKHNIKNTMAA--SVAARLVNIRNNSLRESLKGFKGA 306
Query: 256 PHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFE 315
PHR++ V + + GVT+V+DSKATN+ + L +K V ++GGQ K N +
Sbjct: 307 PHRLEEV-KVVDGVTYVNDSKATNVNSVFYALDTIK-TPIVWIVGGQDK------GNDYN 358
Query: 316 KLIEPLNHHRCVITEC 331
L+ P H + C
Sbjct: 359 SLL-PYVHEKVRAIVC 373
>gi|148994421|ref|ZP_01823644.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
pneumoniae SP9-BS68]
gi|168488368|ref|ZP_02712567.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae SP195]
gi|417678647|ref|ZP_12328045.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA17570]
gi|418125303|ref|ZP_12762219.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA44511]
gi|418191128|ref|ZP_12827633.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA47388]
gi|418213866|ref|ZP_12840601.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA54644]
gi|418233890|ref|ZP_12860470.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA08780]
gi|419484436|ref|ZP_14024212.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA43257]
gi|419507765|ref|ZP_14047419.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA49542]
gi|421219884|ref|ZP_15676739.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae 2070425]
gi|421222215|ref|ZP_15679009.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae 2070531]
gi|421278464|ref|ZP_15729274.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA17301]
gi|421293777|ref|ZP_15744501.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA56113]
gi|421300550|ref|ZP_15751221.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA19998]
gi|147927257|gb|EDK78291.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
pneumoniae SP9-BS68]
gi|183573146|gb|EDT93674.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae SP195]
gi|332074492|gb|EGI84968.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA17570]
gi|353799347|gb|EHD79666.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA44511]
gi|353858727|gb|EHE38687.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA47388]
gi|353871149|gb|EHE51020.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA54644]
gi|353889329|gb|EHE69100.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA08780]
gi|379583947|gb|EHZ48824.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA43257]
gi|379612610|gb|EHZ77327.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA49542]
gi|395589539|gb|EJG49857.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae 2070531]
gi|395589959|gb|EJG50274.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae 2070425]
gi|395881836|gb|EJG92884.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA17301]
gi|395895109|gb|EJH06085.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA56113]
gi|395899974|gb|EJH10913.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA19998]
Length = 450
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 144/297 (48%), Gaps = 23/297 (7%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L G V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LAKGIPVLTEVELAYLI--SEAPIIGITGSNGKTTTTTMIGEVLTAAGQHGLLSGNIGYP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A + V+E+SS+Q+ + + F P ++V+ NL P H++ H +
Sbjct: 151 ASQVA-------QTASDKDTLVMELSSFQL-MGVQEFHPEIAVITNLMPTHIDYHGSFSE 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEV 201
Y K ++ + M +L F NQ L + + A + AF ++ A ++
Sbjct: 203 YVAAKWNIQNKMTAADFLVLNF-NQDLAKDLTSK--TEATVVAFSTLEKVDGAYLEDGQL 259
Query: 202 PAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQI 261
G V + + + V G HN N A+A ++V L VD + + T+ HR+Q
Sbjct: 260 YFRGEVV-MAANEIGVPGSHNVEN-ALATIAVAKLR-DVDNQTIKETLSAFGGVKHRLQF 316
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
V DI+GV + +DSK+TN+ AT L K V++ GG + N F++L+
Sbjct: 317 VD-DIKGVKFYNDSKSTNILATQKALSGFDNSKVVLIAGGLDR------GNEFDELV 366
>gi|444414617|ref|ZP_21210870.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
pneumoniae PNI0199]
gi|444281479|gb|ELU86796.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
pneumoniae PNI0199]
Length = 450
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 146/297 (49%), Gaps = 23/297 (7%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L G V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LAKGIPVLTEVELAYLI--SEAPIIGITGSNGKTTTTTMIGEVLTAAGQHGLLSGNIGYP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A + + K V+E+SS+Q+ + + F P ++V+ NL P H++ H +
Sbjct: 151 ASQVA----QIATDKNTL---VMELSSFQL-MGVQEFHPEIAVITNLMPTHIDYHGSFSE 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEV 201
Y K ++ + M +L F NQ L + + A + F ++ A ++
Sbjct: 203 YVAAKWNIQNKMAAADFLVLNF-NQDLAKDLASK--TEATVVPFSTLEKVDGAYLEDGQL 259
Query: 202 PAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQI 261
G V + + + V G HN N A+A ++V L GVD + + T+ HR+Q
Sbjct: 260 YFRGEVV-MAANEIGVPGSHNVEN-ALATIAVAKLR-GVDNQTIKETLSAFGGVKHRLQF 316
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
V DI+GV + +DSK+TN+ AT L K V++ GG + N F++L+
Sbjct: 317 VD-DIKGVKFYNDSKSTNILATQKALSGFDNSKVVLIAGGLDR------GNEFDELV 366
>gi|423304794|ref|ZP_17282793.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides
uniformis CL03T00C23]
gi|423310092|ref|ZP_17288076.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides
uniformis CL03T12C37]
gi|392682732|gb|EIY76074.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides
uniformis CL03T12C37]
gi|392683458|gb|EIY76793.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides
uniformis CL03T00C23]
Length = 443
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 147/305 (48%), Gaps = 30/305 (9%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
L + G ++SE++FA + K++ +TG+NGK+T + + + G+ + GN+GN
Sbjct: 81 LKEKGTPIISEIEFAGRYT--DAKMVCITGSNGKTTTTSLIYHIFKSAGLNVGLAGNIGN 138
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDHLERHK-T 138
L AL + + V+E+SS+Q++ N Y F ++V++N+TPDHL+R+
Sbjct: 139 SL--------ALQVATEQHDYYVIELSSFQLD--NMYNFRANIAVLMNITPDHLDRYDHC 188
Query: 139 MKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKID-----TE 193
M+ Y K + + + + + + + H A + F VK D E
Sbjct: 189 MQKYVDAKFRITQNQTSEDAFIFWNDDPIIKRELDKHGLR-AHLYPFAAVKEDGAIAYVE 247
Query: 194 AKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILR 253
P + ++ + + G HN +N+ A +S L G+ E + + +
Sbjct: 248 DGEVEINEP---IAFNMEQEELALHGTHNLYNSLAAGISA-NL-AGIRKEYIRKALSDFK 302
Query: 254 TPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNG 313
HR++ V ++GV++++DSKATN+ + L + G K V++LGG+ K G +
Sbjct: 303 GVEHRLEKVAT-VRGVSFINDSKATNVNSCWYALQSMTG-KTVLILGGKDK---GNDYTE 357
Query: 314 FEKLI 318
E L+
Sbjct: 358 IEDLV 362
>gi|421226866|ref|ZP_15683580.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae 2072047]
gi|395597936|gb|EJG58142.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae 2072047]
Length = 450
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 145/297 (48%), Gaps = 23/297 (7%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L G V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LAKGIPVLTEVELAYLI--SEAPIIGITGSNGKTTTTTMIGEVLTAAGQHGLLSGNIGYP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A S K V+E+SS+Q+ + + F P ++V+ NL P H++ H +
Sbjct: 151 ASQVA----QTASDKDTL---VMELSSFQL-MGVQEFHPEIAVITNLMPTHIDYHGSFSE 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEV 201
Y K ++ + M +L F NQ L + + A + AF ++ A ++
Sbjct: 203 YVAAKWNIQNKMTAADFLVLNF-NQDLAKDLTSK--TEATVVAFSTLEKVDGAYLEDGQL 259
Query: 202 PAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQI 261
G V + + + V G HN N A+A ++V L VD + + T+ HR+Q
Sbjct: 260 YFRGEVV-MAANEIGVPGSHNVEN-ALATIAVAKLR-DVDNQTIKETLSAFGGVKHRLQF 316
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
V DI+GV + +DSK+TN+ AT L K V++ GG + N F++L+
Sbjct: 317 VD-DIKGVKFYNDSKSTNILATQKALSGFDNSKVVLIAGGLDR------GNEFDELV 366
>gi|373500790|ref|ZP_09591163.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Prevotella micans
F0438]
gi|371951748|gb|EHO69591.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Prevotella micans
F0438]
Length = 443
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 159/314 (50%), Gaps = 34/314 (10%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
+++ G R++SE++FA + S K++ +TG+NGK+T + + + G + + GN+G
Sbjct: 82 IIKQGTRIISEIEFAGRYT--SSKMICITGSNGKTTTTSLIYHIFRDAGYDVGLAGNIGR 139
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDHLERHKT- 138
L AL + + V+E+SS+Q++ N Y F ++++LN+TPDHL+R+
Sbjct: 140 SL--------ALQVALEPHEYYVIELSSFQLD--NMYDFRANIAILLNITPDHLDRYDNK 189
Query: 139 MKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTAS 198
+NYA +K + + + + + + ++ +FN+ + +P ++
Sbjct: 190 FENYADSKMRIIQNQTPDDSFIYWNDDPVIQKELR--KFNVKAV-CYPFSELKEHGSIGY 246
Query: 199 FEVPAVGVVS----QLQLHNMKVMGRHNYHNAAVAALSVLGLDI-GVDVEALNSTIEILR 253
E + ++ ++ + G+HN +N+ A ++ +I G+ E + ++
Sbjct: 247 IEQGMYTIEQPTPFNIEQESLSLTGKHNIYNSLAAGIAS---NISGIRKENIRKSLSDFP 303
Query: 254 TPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNG 313
HR++ V + + GV +++DSKATN++A L ++ ++++GG+ K N
Sbjct: 304 GVEHRLEKVCK-VAGVQYINDSKATNVDACWYALESMRT-PTILIIGGKDK------GND 355
Query: 314 FEKLIEPLNHHRCV 327
+E I+PL +C
Sbjct: 356 YEP-IKPLVKEKCT 368
>gi|15604275|ref|NP_220791.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Rickettsia
prowazekii str. Madrid E]
gi|383487244|ref|YP_005404924.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Rickettsia
prowazekii str. GvV257]
gi|383487822|ref|YP_005405501.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Rickettsia
prowazekii str. Chernikova]
gi|383488669|ref|YP_005406347.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Rickettsia
prowazekii str. Katsinyian]
gi|383489508|ref|YP_005407185.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Rickettsia
prowazekii str. Dachau]
gi|383499648|ref|YP_005413009.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Rickettsia
prowazekii str. BuV67-CWPP]
gi|383500484|ref|YP_005413844.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Rickettsia
prowazekii str. RpGvF24]
gi|386082258|ref|YP_005998835.1| UDP-N-acetylmuramoylalanine--D-glutamateligase [Rickettsia
prowazekii str. Rp22]
gi|6225735|sp|Q9ZDC2.1|MURD_RICPR RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|3860967|emb|CAA14867.1| UDP-N-ACETYLMURAMOYLALANINE--D-GLUTAMATE LIGASE (murD) [Rickettsia
prowazekii str. Madrid E]
gi|292572022|gb|ADE29937.1| UDP-N-acetylmuramoylalanine--D-glutamateligase [Rickettsia
prowazekii str. Rp22]
gi|380757609|gb|AFE52846.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Rickettsia
prowazekii str. GvV257]
gi|380758181|gb|AFE53417.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Rickettsia
prowazekii str. RpGvF24]
gi|380760701|gb|AFE49223.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Rickettsia
prowazekii str. Chernikova]
gi|380761548|gb|AFE50069.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Rickettsia
prowazekii str. Katsinyian]
gi|380762394|gb|AFE50914.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Rickettsia
prowazekii str. BuV67-CWPP]
gi|380763231|gb|AFE51750.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Rickettsia
prowazekii str. Dachau]
Length = 445
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 137/288 (47%), Gaps = 45/288 (15%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
++S++D + +++K +A+TGTNGKST + +LN G++ V GN+G P +A
Sbjct: 90 IISDIDLFFEK-SKNLKFIAITGTNGKSTTTALISHILNSNGLDYPVAGNIGVPALQA-- 146
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
K + V+E+SS+Q+++ K F V+V+LN+TPDHL+R++ M +Y K
Sbjct: 147 --------KASNEGYVLELSSFQLDLV-KSFTVKVAVLLNITPDHLDRYQDMNDYIAAKA 197
Query: 148 HLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAV--- 204
+F M ++ N + + F ++ D K F V +
Sbjct: 198 KIFDRMDKDSYAVINIDNDYCRK-------------IFVLLQKDQSIKLIPFSVTKILKN 244
Query: 205 GV-VSQLQLH----------NMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILR 253
G+ + ++H N + G HN N +AA + IG++ + + +I +
Sbjct: 245 GISIVDDKIHDNDLTYKLPLNKNLQGLHNCEN--IAASYAVAKIIGLESKKILESISSFQ 302
Query: 254 TPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGG 301
+ HRMQ + I +++ +DSKATN + L +K + L G
Sbjct: 303 SLHHRMQYIGS-INNISFYNDSKATN---AISALQSIKALDNIYWLAG 346
>gi|388259729|ref|ZP_10136898.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Cellvibrio sp. BR]
gi|387936455|gb|EIK43017.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Cellvibrio sp. BR]
Length = 446
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 127/266 (47%), Gaps = 27/266 (10%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+A+TG+N KSTV T VG+M GI VGGNLG P AL ++ V+
Sbjct: 109 IVAITGSNAKSTVTTLVGEMAKAAGINVAVGGNLGTP---------ALELLNDSVELYVM 159
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLF---SHMVNTKLGLL 161
E+SS+Q+E K V+ +LN++ DHL+R++ M+ Y L K ++ H+V + +L
Sbjct: 160 ELSSFQLETVTK-LNAKVATILNISADHLDRYENMRAYILAKLRVYFGAEHIVVNRNDVL 218
Query: 162 PFGNQHLNEAIKGHRF-NLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGR 220
+ L +K F A G+F + D E A + + +KV GR
Sbjct: 219 T--HPPLAAGVKPIYFGGRADFGSFGLLTRD------GIEYLAKNLTPLMAASELKVRGR 270
Query: 221 HNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNL 280
HN NA A I +D A+ T++ HR + V V + +DSK TN+
Sbjct: 271 HNIDNALAALALGDAAGIPLD--AMLGTLKTFSGLRHRCEFVAEK-NAVEFYNDSKGTNI 327
Query: 281 EATCTGLMDL--KGHKCVILLGGQAK 304
AT + L + +++LGG+ K
Sbjct: 328 GATLAAISGLARDPQQLIVILGGEGK 353
>gi|37527520|ref|NP_930864.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Photorhabdus
luminescens subsp. laumondii TTO1]
gi|60390525|sp|Q7N145.1|MURD_PHOLL RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|36786955|emb|CAE16029.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase
(UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase)
(D-glutamic acid adding enzyme) [Photorhabdus
luminescens subsp. laumondii TTO1]
Length = 436
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 137/271 (50%), Gaps = 41/271 (15%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+A+TG+NGKSTV + VG+M + VGGN+G P AL K Q+ V+
Sbjct: 107 IVAITGSNGKSTVTSLVGEMAKAANWQVGVGGNIGLP---------ALELLKKSCQLYVL 157
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERH-KTMKNYALTKCHLFSH----MVNTKLG 159
E+SS+Q+E T + VLN+T DH++R+ + + Y K ++ +VN +
Sbjct: 158 ELSSFQLET-TYSLNATAAAVLNVTEDHMDRYPQGVSQYRAAKLRIYHQAKRCIVNAQDP 216
Query: 160 L-LP---FGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNM 215
L LP ++ ++ + + L AF +K+ ++ A+ E+
Sbjct: 217 LTLPEMGMDSRCVSFGVDCGDYQLDSENAF--LKVHNQSLLATNEI-------------- 260
Query: 216 KVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDS 275
K+ GRHNY N VA L +G+ EA +T+ + HR Q+ + +GV W++DS
Sbjct: 261 KLTGRHNYANGLVAL--ALADAVGIPREASLATLTVYPGLDHRFQLARLN-KGVRWINDS 317
Query: 276 KATNLEATCTGL--MDLKGHKCVILLGGQAK 304
KATN+ +T L ++L+G +LLGG K
Sbjct: 318 KATNVGSTMAALDGLNLEG-TLYLLLGGDGK 347
>gi|240948408|ref|ZP_04752786.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
[Actinobacillus minor NM305]
gi|240297234|gb|EER47792.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
[Actinobacillus minor NM305]
Length = 434
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 155/339 (45%), Gaps = 48/339 (14%)
Query: 5 WLFLLEFQLKATGLACL-------LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTV 57
WL + + + GLA +Q+G V+ +++ + I+A+TG NGKSTV
Sbjct: 63 WLLSSDLIVISPGLALATPEIQQAIQAGVEVVGDIELFCR--EAKAPIIAITGANGKSTV 120
Query: 58 VTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY 117
T +M GI+ +GGN+G P AL K +++ V+E+SS+Q+E
Sbjct: 121 TTLTTEMAKQAGIKVGMGGNIGVP---------ALSLLKSDYELYVLELSSFQLETTYS- 170
Query: 118 FCPTVSVVLNLTPDHLERH-KTMKNYALTKCHLFSHMVNTKLG---LLPFGNQHLNEAIK 173
+ +LN++ DH++R+ +++ Y K ++ + N + L + Q + + I+
Sbjct: 171 LKAKAATILNISEDHMDRYNNSVEEYRAAKLRIYQNAENIIVNGEDPLTYPTQAVEKLIR 230
Query: 174 GHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSV 233
N + K DT +++ +G+ M + GRHN NA A
Sbjct: 231 FAEQNAEY-----SKKNDT---LYAYDDAVIGI------KQMLIRGRHNEMNALAAMALA 276
Query: 234 LGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLK-G 292
G+ E + ++I PHR Q V + GV WV+DSKATN+ +T L L+
Sbjct: 277 --EAAGIPREGIVKALQIYGGLPHRFQAVATN-DGVRWVNDSKATNVGSTVAALNGLEVA 333
Query: 293 HKCVILLGGQAKVLNGQESNGFEKLIEPLNHHRCVITEC 331
+LLGG K + F +L+ PL + ++ C
Sbjct: 334 GTLYLLLGGDGKAAD------FSELV-PLVNKSNIVCYC 365
>gi|398930636|ref|ZP_10664701.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Pseudomonas sp.
GM48]
gi|398164946|gb|EJM53070.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Pseudomonas sp.
GM48]
Length = 448
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 144/295 (48%), Gaps = 40/295 (13%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+A++G+N KSTV T VG+M G VGGNLG P AL + ++ V+
Sbjct: 111 IVAISGSNAKSTVTTLVGEMAAAAGKRVAVGGNLGTP---------ALDLLRDDVELYVM 161
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLF----SHMVNTKLGL 160
E+SS+Q+E ++ V+ VLN++ DH++R+ + Y L K +F +VN + L
Sbjct: 162 ELSSFQLETTDQ-LNAEVATVLNISEDHMDRYSGLPAYHLAKHRIFRGAKQFVVNRQDAL 220
Query: 161 LPFGNQHLNEAIKGHRFNL--AWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVM 218
+ E F L AF G++ + K +FE + + + +K+
Sbjct: 221 ---SRPLMGEGQPCWTFGLNKPDFKAF-GIREEDGEKYLAFEFQNL-----MPVRELKIR 271
Query: 219 GRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKAT 278
G HN NA A G +G+ +A+ S++ HR Q V RD+ GV + +DSKAT
Sbjct: 272 GAHNQSNALAALAL--GHAVGLPFDAMLSSLRTFAGLEHRCQWV-RDLDGVGYYNDSKAT 328
Query: 279 NLEATCTGL----MDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPLNHH-RCVI 328
N+ A + D+ G K V++ GG K G E F+ L +P+ + R VI
Sbjct: 329 NVGAALAAIEGLGADIDG-KVVLIAGGDGK---GAE---FKDLRDPVAANCRAVI 376
>gi|423294146|ref|ZP_17272273.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides ovatus
CL03T12C18]
gi|392676642|gb|EIY70073.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides ovatus
CL03T12C18]
Length = 444
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 150/308 (48%), Gaps = 36/308 (11%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
L G V+SE++FA + K++ +TG+NGK+T + + + G+ + GN+G
Sbjct: 82 LKAQGTPVISEIEFAGRYT--DAKMICITGSNGKTTTTSLIYHIFKSAGLNVGLAGNIGK 139
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDHLERHK-T 138
L AL ++ ++E+SS+Q++ N Y F ++V++N+TPDHL+R+
Sbjct: 140 SL--------ALQVAEDYHDYYIIELSSFQLD--NMYNFRANIAVLMNITPDHLDRYDHC 189
Query: 139 MKNYALTKCHLFSHMVNTKLGLL----PFGNQHLNE-AIKGHRFNLAWI---GAFPGVKI 190
M+NY K + + + P Q L + +K H + A + GA V+
Sbjct: 190 MQNYIDAKFRITQNQTPDDAFIFWNDDPIIRQELAKHGLKAHLYPFAAVKEDGAIAYVE- 248
Query: 191 DTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIE 250
D E K + ++ + + G+HN +N+ A +S L G+ E + +
Sbjct: 249 DHEVKITE------PIAFNMEQEELALTGQHNLYNSLAAGISA-NL-AGIAKENIRKALS 300
Query: 251 ILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQE 310
+ HR++ V R ++G+ +++DSKATN+ + L + K V++LGG+ K G +
Sbjct: 301 DFKGVEHRLEKVAR-VRGIDFINDSKATNVNSCWYALQSMTT-KTVLILGGKDK---GND 355
Query: 311 SNGFEKLI 318
E L+
Sbjct: 356 YTEIEDLV 363
>gi|270295451|ref|ZP_06201652.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides sp.
D20]
gi|270274698|gb|EFA20559.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides sp.
D20]
Length = 444
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 148/305 (48%), Gaps = 30/305 (9%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
L + G ++SE++FA + + K++ +TG+NGK+T + + + G+ + GN+GN
Sbjct: 82 LKEKGTPIISEIEFAGRYT--NAKMVCITGSNGKTTTTSLIYHIFKSAGLNVGLAGNIGN 139
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDHLERHK-T 138
L AL + + V+E+SS+Q++ N Y F ++V++N+TPDHL+R+
Sbjct: 140 SL--------ALQVATEQHDYYVIELSSFQLD--NMYNFRANIAVLMNITPDHLDRYDHC 189
Query: 139 MKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKID-----TE 193
M+ Y K + + + + + + + H A + F VK D E
Sbjct: 190 MQKYVDAKFRITQNQTSEDAFIFWNDDPIIKRELDKHGLR-AHLYPFAAVKEDGAIAYVE 248
Query: 194 AKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILR 253
P + ++ + + G HN +N+ A +S L G+ E + + +
Sbjct: 249 DGEVEINEP---IAFNMEQEELALHGTHNLYNSLAAGISA-NL-AGIRKEYIRKALSDFK 303
Query: 254 TPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNG 313
HR++ V ++GV++++DSKATN+ + L + G K V++LGG+ K G +
Sbjct: 304 GVEHRLEKVAT-VRGVSFINDSKATNVNSCWYALQSMTG-KTVLILGGKDK---GNDYTE 358
Query: 314 FEKLI 318
E L+
Sbjct: 359 IEDLV 363
>gi|330446841|ref|ZP_08310492.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
gi|328491032|dbj|GAA04989.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
Length = 446
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 163/333 (48%), Gaps = 46/333 (13%)
Query: 5 WLFLLEFQLKATGLACLL-------QSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTV 57
WL + + + G+A ++G ++ +++ A+ + + ++A+TG+NGKSTV
Sbjct: 65 WLLSADMIIASPGIALATPELVLAAEAGVEIIGDIELFAREVDK--PVVAITGSNGKSTV 122
Query: 58 VTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY 117
+ VG+M GI+ VGGN+G AA +A + Q+ V+E+SS+Q+E +
Sbjct: 123 TSLVGEMAKEAGIDVGVGGNIGF----AALDMLA-----QQHQLYVLELSSFQLETTSSL 173
Query: 118 FCPTVSVVLNLTPDHLERHK-TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHR 176
T +V LNL+ DH++R+ + Y+ K +F H KL + F L A K +
Sbjct: 174 EL-TAAVYLNLSEDHMDRYPGGLAQYSQAKMRIFDH---AKLAV--FNRDDL--ATKPTQ 225
Query: 177 FNLAWIGAFPGVKIDTEA----KTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALS 232
F+ GA D +A E V + + + ++ ++GRHN N A
Sbjct: 226 FS----GAMTSFGFDEQAYGIVSVDGKEWLVVNGEAVMAVADIALVGRHNVANCLAALAL 281
Query: 233 VLGLDIGVDVEALNSTIEILRTPPHRMQI-VHRDIQGVTWVDDSKATNLEATCTGL--MD 289
GV +A ++ HR Q+ V+R GV WV+DSKATNL +T L +
Sbjct: 282 A--DAAGVPRDASCRAMQHYTGLAHRCQLAVNR--HGVRWVNDSKATNLASTLAALNGLQ 337
Query: 290 LKGHKCVILLGGQAKVLNGQESNGFEKLIEPLN 322
L+G K +L+GG +K G E + + ++ LN
Sbjct: 338 LEG-KLHLLMGGDSK---GAEFSELKPVLADLN 366
>gi|345890657|ref|ZP_08841522.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Desulfovibrio sp.
6_1_46AFAA]
gi|345049011|gb|EGW52830.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Desulfovibrio sp.
6_1_46AFAA]
Length = 436
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 86/281 (30%), Positives = 126/281 (44%), Gaps = 46/281 (16%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V++E++ A + + +LAVTGT+GK+T + ML G F+GGN+G PLSE
Sbjct: 107 VLAEMELAWRYLDDE-PVLAVTGTSGKTTTASLAAAMLQAQGYTVFLGGNIGTPLSEYVL 165
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
S K V V+E+SS+Q++ + FCP V+LN+TP+HL+ HK M Y K
Sbjct: 166 -------SGRKADVLVLEISSFQLQACST-FCPRAGVLLNITPNHLDYHKDMAEYTEAKF 217
Query: 148 HLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVV 207
LF L +L L++ +G FNL V V
Sbjct: 218 RLFRCQDEGDLAVL---GADLHDPAQG--FNL--------------------RARRVWVR 252
Query: 208 SQLQLHNMKVMGRHNYHN--AAVAALSVLGLDIGVDVEALNSTIEILRTP--PHRMQIVH 263
+ + G HN N AA A G V N+ + R PHR+++V
Sbjct: 253 ESERFPQSGLPGAHNKFNEEAAWQACRFFG------VSEANAARAVARFKPLPHRLELV- 305
Query: 264 RDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
R+ GV +V+DSK T + + L +L GG+ K
Sbjct: 306 RERCGVLYVNDSKCTTVSSLKVALQAFD-RPLRLLCGGKFK 345
>gi|299147132|ref|ZP_07040199.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Bacteroides sp.
3_1_23]
gi|298515017|gb|EFI38899.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Bacteroides sp.
3_1_23]
Length = 444
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 150/308 (48%), Gaps = 36/308 (11%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
L G V+SE++FA + K++ +TG+NGK+T + + + G+ + GN+G
Sbjct: 82 LKAQGTPVISEIEFAGRYT--DAKMICITGSNGKTTTTSLIYHIFKSAGLNVGLAGNIGK 139
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDHLERHK-T 138
L AL ++ ++E+SS+Q++ N Y F ++V++N+TPDHL+R+
Sbjct: 140 SL--------ALQVAEDYHDYYIIELSSFQLD--NMYNFRANIAVLMNITPDHLDRYDHC 189
Query: 139 MKNYALTKCHLFSHMVNTKLGLL----PFGNQHLNE-AIKGHRFNLAWI---GAFPGVKI 190
M+NY K + + + P Q L + +K H + A + GA V+
Sbjct: 190 MQNYIDAKFRITQNQTPDDAFIFWNDDPIIRQELAKHGLKAHLYPFAAVKEDGAIAYVE- 248
Query: 191 DTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIE 250
D E K + ++ + + G+HN +N+ A +S L G+ E + +
Sbjct: 249 DHEVKITE------PIAFNMEQEELALTGQHNLYNSLAAGISA-NL-AGIAKENIRKALS 300
Query: 251 ILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQE 310
+ HR++ V R ++G+ +++DSKATN+ + L + K V++LGG+ K G +
Sbjct: 301 DFKGVEHRLEKVAR-VRGIDFINDSKATNVNSCWYALQSMTT-KTVLILGGKDK---GND 355
Query: 311 SNGFEKLI 318
E L+
Sbjct: 356 YTEIEDLV 363
>gi|383111005|ref|ZP_09931823.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides sp. D2]
gi|313694576|gb|EFS31411.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides sp. D2]
Length = 444
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 149/308 (48%), Gaps = 36/308 (11%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
L G V+SE++FA + K++ +TG+NGK+T + + + G+ + GN+G
Sbjct: 82 LKAQGTPVISEIEFAGRYT--DAKMICITGSNGKTTTTSLIYHIFKSAGLNVGLAGNIGK 139
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDHLERHK-T 138
L AL ++ ++E+SS+Q++ N Y F ++V++N+TPDHL+R+
Sbjct: 140 SL--------ALQVAEDYHDYYIIELSSFQLD--NMYNFRANIAVLMNITPDHLDRYDHC 189
Query: 139 MKNYALTKCHLFSHMVNTKLGLL----PFGNQHL-NEAIKGHRFNLAWI---GAFPGVKI 190
M+NY K + + + P Q L +K H + A + GA V+
Sbjct: 190 MQNYIDAKFRITQNQTPDDAFIFWNDDPIIRQELAKHGLKAHLYPFAAVKEDGAIAYVE- 248
Query: 191 DTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIE 250
D E K + ++ + + G+HN +N+ A +S L G+ E + +
Sbjct: 249 DHEVKITE------PIAFNMEQEELALTGQHNLYNSLAAGISA-NL-AGIAKENIRKALS 300
Query: 251 ILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQE 310
+ HR++ V R ++G+ +++DSKATN+ + L + K V++LGG+ K G +
Sbjct: 301 DFKGVEHRLEKVAR-VRGIDFINDSKATNVNSCWYALQSMTT-KTVLILGGKDK---GND 355
Query: 311 SNGFEKLI 318
E L+
Sbjct: 356 YTEIEDLV 363
>gi|168492240|ref|ZP_02716383.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae CDC0288-04]
gi|183573524|gb|EDT94052.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae CDC0288-04]
Length = 450
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 144/291 (49%), Gaps = 23/291 (7%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P S+ A
Sbjct: 99 VLTEVELAYLI--SEAPIIGITGSNGKTTTTTMIGEVLTAAGQHGLLSGNIGYPASQVA- 155
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
+ S K V+E+SS+Q+ + + F P ++V+ NL P H++ H + Y K
Sbjct: 156 ---QIASDKDTL---VMELSSFQL-MGVQEFHPEIAVITNLMPTHIDYHGSFSEYVAAKW 208
Query: 148 HLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVV 207
++ + M +L F NQ L + + A + F ++ A ++ G V
Sbjct: 209 NIQNKMTAADFLVLNF-NQDLVKDLASK--TEATVVPFSTLEKVDGAYLEDGQLYFRGEV 265
Query: 208 SQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQ 267
+ + + V G HN N A+A ++V L GVD + + T+ HR+Q V DI+
Sbjct: 266 V-MAANEIGVPGSHNVEN-ALATIAVAKLR-GVDNQTIKETLSAFGGVKHRLQFVD-DIK 321
Query: 268 GVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
GV + +DSK+TN+ AT L K V++ GG + N F++L+
Sbjct: 322 GVKFYNDSKSTNILATQKALSGFDNSKVVLIAGGLDR------GNEFDELV 366
>gi|325280027|ref|YP_004252569.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Odoribacter
splanchnicus DSM 20712]
gi|324311836|gb|ADY32389.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Odoribacter
splanchnicus DSM 20712]
Length = 449
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 147/305 (48%), Gaps = 37/305 (12%)
Query: 3 MLWLFLLEFQLKATGL-------ACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKS 55
M +F E +K+ G+ L + G V+SE++FA + K++ +TG+NGK+
Sbjct: 56 MDRIFAAELVVKSPGIPDTVPMVVALRERGIEVISEIEFAGR--HTEAKMVCITGSNGKT 113
Query: 56 TVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPN 115
T +L GI+A + GN+G L A ++ + VVE+SS+Q++
Sbjct: 114 TTTLLTCHILTTAGIDAGLAGNVGRSL--------AAQVAEDAHPLYVVELSSFQLDGMF 165
Query: 116 KYFCPTVSVVLNLTPDHLERHK-TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKG 174
F ++V+ N+TPDHL+R+ +NY +K + ++M L + ++ + ++
Sbjct: 166 D-FRADIAVLTNITPDHLDRYDHKFENYIDSKFRILNNMRPQDLFIYGLDSEAVGHRLRQ 224
Query: 175 HRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHN---------MKVMGRHNYHN 225
R G + E T G +QL N + + GRHN +N
Sbjct: 225 VRVVPRMAGFIYADRSIWEKNTCRSGAWMEGEEVVVQLENRQFRIAKQEISIQGRHNVYN 284
Query: 226 AAVAALSVLGLDIGVDVEALNSTIEILRTPP---HRMQIVHRDIQGVTWVDDSKATNLEA 282
A A L+ + +GV E + E LRT P HR++ V R ++GVT+++DSKATN+++
Sbjct: 285 AMAAILAC--MQVGVSDEKI---AEGLRTFPQVEHRLETV-RVVEGVTYINDSKATNVDS 338
Query: 283 TCTGL 287
L
Sbjct: 339 AWYAL 343
>gi|383753246|ref|YP_005432149.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Selenomonas
ruminantium subsp. lactilytica TAM6421]
gi|381365298|dbj|BAL82126.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Selenomonas
ruminantium subsp. lactilytica TAM6421]
Length = 457
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 138/307 (44%), Gaps = 57/307 (18%)
Query: 23 QSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPL 82
Q RV SE++ A ++ + I AVTGTNGK+T VT +G +L + VGGN+G PL
Sbjct: 93 QRKIRVASEVELAYRL--KKAPICAVTGTNGKTTTVTLLGLLLEAHFDKVGVGGNIGVPL 150
Query: 83 SEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNY 142
SE A P E+SSYQME+ + F P V+ VLN+TPDH+ RH +++ Y
Sbjct: 151 SEVALEI-------PADGCIAAEISSYQMEVTEE-FHPRVATVLNVTPDHIVRHGSIEEY 202
Query: 143 ALTKCHLFSHMVNTKLGLLPFGNQ--------------------HLNEA--IKGHRFNLA 180
K +F+ + +L + + HL+E ++G +A
Sbjct: 203 QRMKERMFAQQNSKDFLVLNYDDDRVKDMANRASAHVVFFSRQVHLHEGAYLEGDMLTIA 262
Query: 181 WIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGV 240
W G + + +G + + G HN NA A +S G
Sbjct: 263 WNG-------------EDYPLCTIG--------ELGIKGAHNVENALAAVMSAFL--AGC 299
Query: 241 DVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLG 300
E + ++ R HR++ V R + GV + +DSKATN ++ L V+L G
Sbjct: 300 TAEEMIPVLKSFRGVEHRIEYV-RTLNGVEYYNDSKATNTDSAIKALETF-ADGIVLLAG 357
Query: 301 GQAKVLN 307
G K+ +
Sbjct: 358 GDDKMTD 364
>gi|160883882|ref|ZP_02064885.1| hypothetical protein BACOVA_01855 [Bacteroides ovatus ATCC 8483]
gi|237720376|ref|ZP_04550857.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides sp.
2_2_4]
gi|262405421|ref|ZP_06081971.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides sp.
2_1_22]
gi|293370476|ref|ZP_06617029.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Bacteroides
ovatus SD CMC 3f]
gi|294646202|ref|ZP_06723856.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Bacteroides
ovatus SD CC 2a]
gi|294809131|ref|ZP_06767849.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Bacteroides
xylanisolvens SD CC 1b]
gi|298480582|ref|ZP_06998779.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Bacteroides sp.
D22]
gi|336404498|ref|ZP_08585193.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides sp.
1_1_30]
gi|345511027|ref|ZP_08790582.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides sp. D1]
gi|423290578|ref|ZP_17269427.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides ovatus
CL02T12C04]
gi|156110612|gb|EDO12357.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Bacteroides
ovatus ATCC 8483]
gi|229442629|gb|EEO48420.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides sp. D1]
gi|229450127|gb|EEO55918.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides sp.
2_2_4]
gi|262356296|gb|EEZ05386.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides sp.
2_1_22]
gi|292634468|gb|EFF53004.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Bacteroides
ovatus SD CMC 3f]
gi|292638420|gb|EFF56784.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Bacteroides
ovatus SD CC 2a]
gi|294443685|gb|EFG12434.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Bacteroides
xylanisolvens SD CC 1b]
gi|295086278|emb|CBK67801.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Bacteroides
xylanisolvens XB1A]
gi|298273403|gb|EFI14967.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Bacteroides sp.
D22]
gi|335942295|gb|EGN04142.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides sp.
1_1_30]
gi|392665231|gb|EIY58759.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides ovatus
CL02T12C04]
Length = 444
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 149/308 (48%), Gaps = 36/308 (11%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
L G V+SE++FA + K++ +TG+NGK+T + + + G+ + GN+G
Sbjct: 82 LKAQGTPVISEIEFAGRYT--DAKMICITGSNGKTTTTSLIYHIFKSAGLNVGLAGNIGK 139
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDHLERHK-T 138
L AL ++ ++E+SS+Q++ N Y F ++V++N+TPDHL+R+
Sbjct: 140 SL--------ALQVAEDYHDYYIIELSSFQLD--NMYNFRANIAVLMNITPDHLDRYDHC 189
Query: 139 MKNYALTKCHLFSHMVNTKLGLL----PFGNQHL-NEAIKGHRFNLAWI---GAFPGVKI 190
M+NY K + + + P Q L +K H + A + GA V+
Sbjct: 190 MQNYIDAKFRITQNQTPDDAFIFWNDDPIIRQELAKHGLKAHLYPFAAVKEDGAIAYVE- 248
Query: 191 DTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIE 250
D E K + ++ + + G+HN +N+ A +S L G+ E + +
Sbjct: 249 DHEVKITE------PIAFNMEQEELALTGQHNLYNSLAAGISA-NL-AGIAKENIRKALS 300
Query: 251 ILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQE 310
+ HR++ V R ++G+ +++DSKATN+ + L + K V++LGG+ K G +
Sbjct: 301 DFKGVEHRLEKVAR-VRGIDFINDSKATNVNSCWYALQSMTT-KTVLILGGKDK---GND 355
Query: 311 SNGFEKLI 318
E L+
Sbjct: 356 YTEIEDLV 363
>gi|404475939|ref|YP_006707370.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Brachyspira
pilosicoli B2904]
gi|404437428|gb|AFR70622.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Brachyspira
pilosicoli B2904]
Length = 463
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 149/287 (51%), Gaps = 28/287 (9%)
Query: 27 RVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAA 86
+V+ E++FA +IP ++VTGT+GK+T V + +++ +A + GN+GN S+
Sbjct: 108 KVIGEIEFAYNLIPDR-NYISVTGTDGKTTTVNLIYSIISSYK-KARLLGNVGNTFSKEV 165
Query: 87 FHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTK 146
S K + V+E+SS+Q+E + F +SV+LN+ DHL+R+ +++Y K
Sbjct: 166 -------ESIEKDEDIVLELSSFQLETVHN-FHSHISVILNIAEDHLDRYDDIEDYFNAK 217
Query: 147 CHLFSHMVNTKLGLL----PFGNQHLNEAIKGH--RFNLAWIGA---FPGVKIDTEAKTA 197
++ + + +L + N++ NE IK FN+ + ++E +
Sbjct: 218 KNITKNQNSNDFLILNYDNSYTNRYYNELIKTKDISFNVLTFSTKCKKANLYYNSEDECL 277
Query: 198 SFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPH 257
+ + +++ QL +G HN N + L+ L +I VE ++ + ++ H
Sbjct: 278 YYNGEKLFSIAKRQL-----LGMHNIENILASVLACLKDNIP--VEYIDKAVNNFKSIEH 330
Query: 258 RMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
R++ V ++I GV +++DSKAT++ A + L + ++++GG+ K
Sbjct: 331 RLEFV-KEINGVKYINDSKATSMSAVMSALKSFDKN-IILIMGGRNK 375
>gi|317046895|ref|YP_004114543.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Pantoea sp. At-9b]
gi|316948512|gb|ADU67987.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Pantoea sp. At-9b]
Length = 438
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 132/283 (46%), Gaps = 63/283 (22%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+A+TG+NGKSTV T VG+M G + VGGN+G P AL K Q+ V+
Sbjct: 107 IVAITGSNGKSTVTTLVGEMARAAGWQVGVGGNIGLP---------ALSLLKSPAQLYVL 157
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK-TMKNYALTKCHLFSH----MVNTKLG 159
E+SS+Q+E + +LN+T DH++R+ M+ Y K ++ + +VN G
Sbjct: 158 ELSSFQLET-TYSLKAAAATILNVTEDHMDRYPLGMQQYRAAKLRIYENARVCVVNADDG 216
Query: 160 L---------------LPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAV 204
+ + G+ HLN + W+ G K+
Sbjct: 217 MTMPVRGADTRCVSFGIDIGDYHLN-----RQQGSTWL-RVKGEKV-------------- 256
Query: 205 GVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDI--GVDVEALNSTIEILRTPPHRMQIV 262
L MK++G+HNY NA A ++I ++AL + + PHR Q+V
Sbjct: 257 -----LNTDEMKLVGQHNYTNALAALALADAVNIPRASSLKALTTFTGL----PHRFQLV 307
Query: 263 HRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCV-ILLGGQAK 304
H + G+ W++DSKATN+ +T L L+ + +LLGG K
Sbjct: 308 H-EAHGIRWINDSKATNVGSTEAALNGLQVKGTLWLLLGGDGK 349
>gi|269798175|ref|YP_003312075.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Veillonella
parvula DSM 2008]
gi|269094804|gb|ACZ24795.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Veillonella parvula
DSM 2008]
Length = 456
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 91/285 (31%), Positives = 145/285 (50%), Gaps = 21/285 (7%)
Query: 25 GKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSE 84
G V+SE++ A +V I+AVTGTNGK+T T + ++L G VGGN+G+ LSE
Sbjct: 92 GIDVVSEVELAYEV--SKSPIVAVTGTNGKTTTTTLLTKVLEGSGKPVHVGGNIGDSLSE 149
Query: 85 AAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYAL 144
A+ S P V E+SSYQ+E K+F P +++LN+TPDHL RHKTM+NY
Sbjct: 150 VAY-------SMPADGFLVAELSSYQLETI-KHFRPIGAIMLNITPDHLARHKTMENYIA 201
Query: 145 TKCHLFSHMVNTKLGLLPFGN---QHLNEAIKGHRFNLAWIGAFPGVKIDTEAK-TASFE 200
K +F + ++T +L + + H ++ A + K + +
Sbjct: 202 AKERIFENQLSTDYLVLNIDDPVVADMEHRAPSHILKISQKKAVENGAYYADGKCYIAKD 261
Query: 201 VPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQ 260
A V++ +H + G HN N + + L +GV VE ++ I HR++
Sbjct: 262 GVAKFVIADEDIH---IPGSHNIEN--ILTVIALSYALGVPVETIHRIISEFHGVEHRLE 316
Query: 261 IVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKV 305
V + I G+T+ +DSKATN+++ L + ++L GG K+
Sbjct: 317 RV-KTIDGITFYNDSKATNVDSVVKALESFD-QQVILLAGGHDKM 359
>gi|19704790|ref|NP_604352.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Fusobacterium
nucleatum subsp. nucleatum ATCC 25586]
gi|19715127|gb|AAL95651.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Fusobacterium
nucleatum subsp. nucleatum ATCC 25586]
Length = 454
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 144/308 (46%), Gaps = 33/308 (10%)
Query: 9 LEFQLKATGLAC------LLQSGKRVMSELDFAAQ-VIPRSIK--ILAVTGTNGKSTVVT 59
LEF +K+ G+ + + G +++ E++ A +I + +K I+A+TGTNGKST
Sbjct: 70 LEFFIKSPGIPYNDFVKEVQKRGIKILDEIEIAYNYMIEKGLKTKIIAITGTNGKSTTTA 129
Query: 60 FVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQME-IPNKYF 118
+ MLNH G +A GN+G LSE + +E+SS+Q+E I N F
Sbjct: 130 KISDMLNHAGYKATYAGNIGRSLSEVLL-------KEKDLDFISLELSSFQLENIEN--F 180
Query: 119 CPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFN 178
P +S+++N+ PDH+ER+K+ Y TK ++ + + ++ + + K +
Sbjct: 181 KPCISMIINIGPDHIERYKSFDEYYNTKFNITKNQTEDLYFIENIDDEEIEKRAKQIKAK 240
Query: 179 LAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNA--AVAALSVLGL 236
+ F I E + + V +L L G HN N VA +L L
Sbjct: 241 RISVSKFKKADIFVENDKIYHDKDDIIDVDKLSLK-----GIHNLENTLFMVATAEILKL 295
Query: 237 DIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCV 296
D E L + I HR ++ + + +++DSKATN+++T + K +
Sbjct: 296 ----DREKLKEFLMIATPLEHRTELFF-NYGKLKFINDSKATNVDSTKFAIQANKN--SI 348
Query: 297 ILLGGQAK 304
++ GG K
Sbjct: 349 LICGGYDK 356
>gi|423214886|ref|ZP_17201414.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides
xylanisolvens CL03T12C04]
gi|392692149|gb|EIY85387.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides
xylanisolvens CL03T12C04]
Length = 444
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 149/309 (48%), Gaps = 38/309 (12%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
L G V+SE++FA + K++ +TG+NGK+T + + + G+ + GN+G
Sbjct: 82 LKAQGTPVISEIEFAGRYT--DAKMICITGSNGKTTTTSLIYHIFKSAGLNVGLAGNIGK 139
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDHLERHK-T 138
L AL ++ ++E+SS+Q++ N Y F ++V++N+TPDHL+R+
Sbjct: 140 SL--------ALQVAEDYHDYYIIELSSFQLD--NMYNFRANIAVLMNITPDHLDRYDHC 189
Query: 139 MKNYALTKCHLFSHMVNTKLGLL----PFGNQHL-NEAIKGHRFNLAWI---GAFPGVKI 190
M+NY K + + + P Q L +K H + A + GA V+
Sbjct: 190 MQNYIDAKFRITQNQTPDDAFIFWNDDPIIRQELAKHGLKAHLYPFAAVKEDGAIAYVE- 248
Query: 191 DTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSV-LGLDIGVDVEALNSTI 249
D E K + ++ + + G+HN +N+ A +S L G+ E + +
Sbjct: 249 DHEVKITE------PIAFNMEQEELALTGQHNLYNSLAAGISANLA---GIAKENIRKAL 299
Query: 250 EILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQ 309
+ HR++ V R ++G+ +++DSKATN+ + L + K V++LGG+ K G
Sbjct: 300 SDFKGVEHRLEKVAR-VRGIDFINDSKATNVNSCWYALQSMTT-KTVLILGGKDK---GN 354
Query: 310 ESNGFEKLI 318
+ E L+
Sbjct: 355 DYTEIEDLV 363
>gi|417958025|ref|ZP_12600942.1| hypothetical protein l13_13540 [Neisseria weaveri ATCC 51223]
gi|343967417|gb|EGV35662.1| hypothetical protein l13_13540 [Neisseria weaveri ATCC 51223]
Length = 445
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 144/292 (49%), Gaps = 18/292 (6%)
Query: 14 KATGLACLLQSGKRVMSELDFAA-QVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEA 72
+A + QSG V+ +++ A ++ +S KI+A+TG+NGK+TV + VG + G++
Sbjct: 80 RAPEIEAFKQSGGVVLGDVEILAHELKGKSDKIIAITGSNGKTTVTSLVGYLCEKCGLDT 139
Query: 73 FVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDH 132
V GN+G P+ EA + V V+E+SS+Q+E + + +VVLN++ DH
Sbjct: 140 VVAGNIGTPVLEA-----YMQRGGKAADVWVLELSSFQLENTD-HLAADAAVVLNISEDH 193
Query: 133 LERHKTMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDT 192
L+R+ + +YA K +F L + + A+K ++ W + G + D
Sbjct: 194 LDRYDDLLDYAHAKDKIFRGSGVQVLN----ADDAMCRAMKRPNRDIKWF-SLEG-QADY 247
Query: 193 EAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEIL 252
A + + A G L + + G HN N A +G+ L I+
Sbjct: 248 WADVQAGRLKA-GANDLLDTAAIPLQGLHNAANVLAALALCEA--VGLPRTELLQHIQTF 304
Query: 253 RTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
+ PHR++ V + G+T++DDSK TN+ AT + L+ V++ GGQ K
Sbjct: 305 KGLPHRVEKVG-EKNGITFIDDSKGTNVGATAAAIAGLQ-SPLVLIAGGQGK 354
>gi|336417333|ref|ZP_08597657.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides ovatus
3_8_47FAA]
gi|335936079|gb|EGM98019.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides ovatus
3_8_47FAA]
Length = 444
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 149/308 (48%), Gaps = 36/308 (11%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
L G V+SE++FA + K++ +TG+NGK+T + + + G+ + GN+G
Sbjct: 82 LKAQGTPVISEIEFAGRYT--DAKMICITGSNGKTTTTSLIYHIFKSAGLNVGLAGNIGK 139
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDHLERHK-T 138
L AL ++ ++E+SS+Q++ N Y F ++V++N+TPDHL+R+
Sbjct: 140 SL--------ALQVAEDYHDYYIIELSSFQLD--NMYNFRANIAVLMNITPDHLDRYDHC 189
Query: 139 MKNYALTKCHLFSHMVNTKLGLL----PFGNQHL-NEAIKGHRFNLAWI---GAFPGVKI 190
M+NY K + + + P Q L +K H + A + GA V+
Sbjct: 190 MQNYIDAKFRITQNQTPDDAFIFWNDDPIIRQELAKHGLKAHLYPFAAVKEDGAIAYVE- 248
Query: 191 DTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIE 250
D E K + ++ + + G+HN +N+ A +S L G+ E + +
Sbjct: 249 DHEVKITE------PIAFNMEQEELALTGQHNLYNSLAAGISA-NL-AGIAKENIRKALS 300
Query: 251 ILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQE 310
+ HR++ V R ++G+ +++DSKATN+ + L + K V++LGG+ K G +
Sbjct: 301 DFKGVEHRLEKVAR-VRGIDFINDSKATNVNSCWYALQSMTT-KTVLILGGKDK---GND 355
Query: 311 SNGFEKLI 318
E L+
Sbjct: 356 YTEIEDLV 363
>gi|444424609|ref|ZP_21220064.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Vibrio
campbellii CAIM 519 = NBRC 15631]
gi|444242101|gb|ELU53617.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Vibrio
campbellii CAIM 519 = NBRC 15631]
Length = 437
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 151/321 (47%), Gaps = 49/321 (15%)
Query: 18 LACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGN 77
+ +L G V+ +++ A + + + +A+TG+NGKSTV G M G+ VGGN
Sbjct: 85 IQAVLAKGTPVVGDIELFAWAVDKPV--IAITGSNGKSTVTDLTGVMAKAAGLTVGVGGN 142
Query: 78 LGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK 137
+G P AL + + V+E+SS+Q+E + + LNL+ DH++R++
Sbjct: 143 IGVP---------ALDLLEQDADLYVLELSSFQLETTSSLKLK-AAAFLNLSEDHMDRYE 192
Query: 138 TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTA 197
M +Y K +F N +L ++ N+ E L G+ D +A
Sbjct: 193 GMSDYRQAKLRIFD---NAELAVV---NRDDQETFPDTETPLVTFGS------DEQA--- 237
Query: 198 SFEVPAVGVVSQLQLH--------NMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTI 249
+ + A G + L H +K++G+HN N AL VL L DV+ + ++
Sbjct: 238 -YGLEADGKRTWLLDHGQRVIASDELKLVGKHNLAN----ALVVLALLKAADVD-YHKSL 291
Query: 250 EILRTP---PHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGH-KCVILLGGQAKV 305
L+T HR Q+V D +GV WV+DSKATN+ +T L L+ K +L+GG K
Sbjct: 292 NALKTYTGLTHRCQVV-ADNRGVKWVNDSKATNIASTMAALSGLESTGKLYLLVGGVGK- 349
Query: 306 LNGQESNGFEKLIEPLNHHRC 326
G + + + LN C
Sbjct: 350 --GADFTPLKPIFATLNLQLC 368
>gi|425901420|ref|ZP_18878011.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Pseudomonas
chlororaphis subsp. aureofaciens 30-84]
gi|397883129|gb|EJK99615.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Pseudomonas
chlororaphis subsp. aureofaciens 30-84]
Length = 448
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 143/297 (48%), Gaps = 44/297 (14%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+A++G+N KSTV T VG+M G VGGNLG P AL ++ V+
Sbjct: 111 IVAISGSNAKSTVTTLVGEMAAAAGKRVAVGGNLGTP---------ALDLLSDDVELYVM 161
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFG 164
E+SS+Q+E ++ V+ VLN++ DH++R+ + Y HL H + + F
Sbjct: 162 ELSSFQLETTDQ-LGAEVATVLNISEDHMDRYSGLPAY-----HLAKHRIFRGARQVVFN 215
Query: 165 NQH------LNEAIKGHRFNLAW--IGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMK 216
Q + E + F L+ AF G++ + K +FE + + + +K
Sbjct: 216 RQDALTRPLIGEGLPCWTFGLSKPDFKAF-GLREENGEKYLAFEFQNL-----MPVRELK 269
Query: 217 VMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSK 276
+ G HN NA A G +G+ +A+ S + HR Q V RD+ GV + +DSK
Sbjct: 270 IRGAHNQSNALAALAL--GHAVGLPFDAMLSALRTFAGLEHRCQWV-RDLDGVGYYNDSK 326
Query: 277 ATNLEATCTGL----MDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPLNHH-RCVI 328
ATN+ A + D++G K V++ GG K G E F+ L +P+ + R VI
Sbjct: 327 ATNVGAALAAIEGLGADIEG-KIVLIAGGDGK---GAE---FKDLRDPVAANCRAVI 376
>gi|395650346|ref|ZP_10438196.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Pseudomonas
extremaustralis 14-3 substr. 14-3b]
Length = 448
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 143/295 (48%), Gaps = 40/295 (13%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+A++G+N KSTV T VG+M G VGGNLG P AL ++ V+
Sbjct: 111 IVAISGSNAKSTVTTLVGEMAAAAGKRVAVGGNLGTP---------ALDLLSDDVELYVM 161
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSH----MVNTKLGL 160
E+SS+Q+E + V+ VLN++ DH++R+ + Y L K +F +VN + L
Sbjct: 162 ELSSFQLETTHD-LGAEVATVLNVSEDHMDRYSGLPAYHLAKHRIFRGAKQVVVNRQDAL 220
Query: 161 LPFGNQHLNEAIKGHRFNLAW--IGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVM 218
+ E + F L AF G++ + K +FE + + + +K+
Sbjct: 221 ---SRPLMGEGLPCWTFGLGKPDFKAF-GIREENGEKYLAFEFQNL-----MPVRELKIR 271
Query: 219 GRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKAT 278
G HN NA A LG +G+ +A+ S++ HR Q V RD+ GV++ +DSKAT
Sbjct: 272 GAHNQSNALAA--LALGHAVGLPFDAMLSSLRTFGGLEHRCQWV-RDLDGVSYYNDSKAT 328
Query: 279 NLEATCTGL----MDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPLNHH-RCVI 328
N+ A + D+ G K +++ GG K + F+ L P+ H R V+
Sbjct: 329 NVGAALAAIEGLGADIDG-KLLLIAGGDGKGAD------FKDLKGPVAEHCRAVV 376
>gi|145637113|ref|ZP_01792776.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Haemophilus
influenzae PittHH]
gi|145269767|gb|EDK09707.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Haemophilus
influenzae PittHH]
Length = 437
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 153/333 (45%), Gaps = 46/333 (13%)
Query: 5 WLFLLEFQLKATGLA-------CLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTV 57
WL + + + GLA L++G V+ +++ + I + +TG+NGKSTV
Sbjct: 62 WLLESDMIVISPGLAVKTLEIQTALKAGVEVIGDIELFCHAATKPI--VGITGSNGKSTV 119
Query: 58 VTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY 117
T V +M G++ +GGN+G P AL ++ V+E+SS+Q+E
Sbjct: 120 TTLVYEMAKAAGVKVGMGGNIGIP---------ALSLLNEDCELYVLELSSFQLETTYS- 169
Query: 118 FCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGL------LPFGNQHLNEA 171
+ VLN+T DH++R+ +++Y K ++ N K+G+ L FG NE
Sbjct: 170 LKAAAATVLNVTEDHMDRYMDLEDYRQAKLRIYH---NAKVGVLNNEDRLTFGE---NEN 223
Query: 172 IKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAAL 231
H + A A +K + + + + L ++GRHNY N A
Sbjct: 224 QAKHTVSFAENSADYWLKTENGKQYLMVKDEVI-----LPCEEATLVGRHNYMNILAAIA 278
Query: 232 SVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLK 291
+ I +D ++ + + + HR Q+VH+ G+ W++DSKATN+ +T L L
Sbjct: 279 LAQAIGINLD--SIRTALRHFKGLDHRFQLVHQ-ANGIRWINDSKATNVGSTVAALAGLY 335
Query: 292 GH-KCVILLGGQAKVLNGQESNGFEKLIEPLNH 323
K +LLGG K + F +L E +N
Sbjct: 336 IEGKLHLLLGGDGKGAD------FSELAELINQ 362
>gi|409913518|ref|YP_006891983.1| UDP-N-acetylmuramylalanine--D-glutamate ligase [Geobacter
sulfurreducens KN400]
gi|298507099|gb|ADI85822.1| UDP-N-acetylmuramylalanine--D-glutamate ligase [Geobacter
sulfurreducens KN400]
Length = 452
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 145/292 (49%), Gaps = 25/292 (8%)
Query: 18 LACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGN 77
L Q+G+ V++E++ A++ I + ++A+TGTNGK+T T G++ G FVGGN
Sbjct: 85 LQAARQAGREVITEIELASRFI--TAPLVAITGTNGKTTTTTLTGELFAGCGFRTFVGGN 142
Query: 78 LGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK 137
+GNPL I L ++ VVE+SS+Q+E + F PTV+V+LN+T DHL+R+
Sbjct: 143 IGNPL-------IELVTTGAAVDRVVVEISSFQLEW-IRSFRPTVAVLLNITEDHLDRYA 194
Query: 138 TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTA 197
T + Y K +F + + +L ++++ I FP + A+
Sbjct: 195 TYQEYIDAKARIFENQTASDWAVL-----NVDDPIVAGLTGRTRAAVFPMSRQRELAEGI 249
Query: 198 SFEVPAV-----GVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEIL 252
+ + G + ++ G HN N + A L +G D + + +E
Sbjct: 250 FYRDGVIIFRHAGRQERFPTDRFRITGVHNIEN--IMASLAAALLLGCDADRALACVEAF 307
Query: 253 RTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
PHRM++V R++ GV + +DSKATN+ + L + ++ GG+ K
Sbjct: 308 GGLPHRMELV-RELDGVRYFEDSKATNVGSVEKALASF--NDITLIAGGKDK 356
>gi|417850107|ref|ZP_12496022.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
mitis SK1080]
gi|339455440|gb|EGP68047.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
mitis SK1080]
Length = 450
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 146/301 (48%), Gaps = 31/301 (10%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L G V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LTKGIPVLTEVELAYLI--SEAPIVGITGSNGKTTTTTMIGEVLTAAGQHGLLSGNIGYP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A S K V+E+SS+Q+ + + F P ++V+ NL P H++ H + +
Sbjct: 151 ASQVAQTA----SDKDTL---VMELSSFQL-MGVQEFHPEIAVITNLMPTHIDYHGSFEE 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGV-KIDT---EAKTA 197
Y K ++ + M +L F NQ L + + A + F + K+D E
Sbjct: 203 YVAAKWNIQNKMTAADFLVLNF-NQDLAKELATK--TQATVVPFSTLEKVDGAYLEDGHL 259
Query: 198 SFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPH 257
F V S++ V G HN N A+A ++V L GVD + + T+ H
Sbjct: 260 YFRGEVVMAASEI-----GVPGSHNVEN-ALATIAVAKLR-GVDNQTIKETLSAFGGVKH 312
Query: 258 RMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKL 317
R+Q V +IQGV + +DSK+TN+ AT L K +++ GG + N F++L
Sbjct: 313 RLQFVD-EIQGVKFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------GNEFDEL 365
Query: 318 I 318
+
Sbjct: 366 V 366
>gi|168486808|ref|ZP_02711316.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae CDC1087-00]
gi|418145904|ref|ZP_12782689.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA13637]
gi|418184467|ref|ZP_12821015.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA47283]
gi|419510138|ref|ZP_14049782.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae NP141]
gi|419529962|ref|ZP_14069493.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA40028]
gi|421212703|ref|ZP_15669665.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae 2070108]
gi|421214890|ref|ZP_15671821.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae 2070109]
gi|183570252|gb|EDT90780.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae CDC1087-00]
gi|353815842|gb|EHD96055.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA13637]
gi|353852065|gb|EHE32055.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA47283]
gi|379574702|gb|EHZ39640.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA40028]
gi|379633331|gb|EHZ97900.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae NP141]
gi|395581110|gb|EJG41583.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae 2070108]
gi|395582449|gb|EJG42911.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae 2070109]
Length = 450
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 146/297 (49%), Gaps = 23/297 (7%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L G V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LAKGIPVLTEVELAYLI--SEAPIIGITGSNGKTTTTTMIGEVLTAAGQHGLLSGNIGYP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A + + K V+E+SS+Q+ + + F P ++V+ NL P H++ H +
Sbjct: 151 ASQVA----QIATDK---NTLVMELSSFQL-MGVQEFHPEIAVITNLMPTHIDYHGLFEE 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEV 201
Y K ++ + M +L F NQ L + + A + F ++ A ++
Sbjct: 203 YVAAKWNIQNKMTAADFLVLNF-NQDLAKDLASK--TEATVVPFSTLEKVDGAYLEDGQL 259
Query: 202 PAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQI 261
G V + + + V G HN N A+A ++V L GVD + + T+ HR+Q
Sbjct: 260 YFRGEVV-MAANEIGVPGSHNVEN-ALATIAVAKLR-GVDNQTIKETLSAFGGVKHRLQF 316
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
V DI+GV + +DSK+TN+ AT L K V++ GG + N F++L+
Sbjct: 317 VD-DIKGVKFYNDSKSTNILATQKALSGFDNSKVVLIAGGLDR------GNEFDELV 366
>gi|262066316|ref|ZP_06025928.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Fusobacterium
periodonticum ATCC 33693]
gi|291380011|gb|EFE87529.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Fusobacterium
periodonticum ATCC 33693]
Length = 432
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 148/315 (46%), Gaps = 47/315 (14%)
Query: 9 LEFQLKATGLAC------LLQSGKRVMSELDFAAQVIPRS---IKILAVTGTNGKSTVVT 59
+EF +K+ G+ + + G +++ E++ A + KI+A+TGTNGKST
Sbjct: 48 IEFFIKSPGIPYNNFVKEVQKRGIKILDEIEVAYNYMVEKNLKTKIIAITGTNGKSTTTA 107
Query: 60 FVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQME-IPNKYF 118
+ +LNH G +A GN+G LSE H + +E+SS+Q+E + N F
Sbjct: 108 KISDLLNHAGYKACYAGNIGRSLSEVLLH-------EKDLDFVSLELSSFQLENVEN--F 158
Query: 119 CPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFGNQHLN---EAIKGH 175
P +S+++N+ PDH+ER+K+ Y TK ++ + + + + + + IK
Sbjct: 159 KPYISMIINMGPDHIERYKSFDEYYDTKFNISKNQDENQYFIENIDDVEIEKRAKQIKAK 218
Query: 176 RFNLAWIGAFPGVKIDTEAKTASFEVP----AVGVVSQLQLHNMKVMGRHNYHNA--AVA 229
R ++ +++K A+ V VG + + + + G HN N VA
Sbjct: 219 RISV------------SKSKEANIYVANDKIYVGKDCIIDVDKLSLKGIHNVENTLFMVA 266
Query: 230 ALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMD 289
+L +D E L + I HR ++ + V +++DSKATN+++T +
Sbjct: 267 TSEIL----NIDREKLKEFLMIATPLEHRTELFF-NYGKVKFINDSKATNVDSTKFAIQA 321
Query: 290 LKGHKCVILLGGQAK 304
K +++ GG K
Sbjct: 322 NKD--SILICGGYDK 334
>gi|322376972|ref|ZP_08051465.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
sp. M334]
gi|321282779|gb|EFX59786.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
sp. M334]
Length = 450
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 146/297 (49%), Gaps = 23/297 (7%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L G V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LAKGIPVLTEVELAYLI--SEAPIIGITGSNGKTTTTTMIGEVLTAAGQHGLLSGNIGYP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A + V+E+SS+Q+ + + F P ++V+ NL P H++ H + +
Sbjct: 151 ASQVA-------QTATDKDTLVMELSSFQL-MGVQEFHPEIAVITNLMPTHIDYHGSFEE 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEV 201
Y K ++ + M +L F NQ L + + A + F ++ A ++
Sbjct: 203 YVAAKWNIQNKMTAADFLVLNF-NQDLAKELASK--TQATVVPFSTLEKVDGAYLEDGQL 259
Query: 202 PAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQI 261
G V + + + V G HN N A+A ++V L GVD + + T+ HR+Q
Sbjct: 260 YFRGEVV-MAANEIGVPGSHNVEN-ALATIAVAKLR-GVDNQTIKETLSAFGGVKHRLQF 316
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
V +I+GV + +DSK+TN+ AT L +K +++ GG + N F++L+
Sbjct: 317 VD-EIKGVKFYNDSKSTNILATQKALSGFDNNKVILIAGGLDR------GNEFDELV 366
>gi|414158129|ref|ZP_11414423.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Streptococcus sp.
F0441]
gi|410870674|gb|EKS18631.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Streptococcus sp.
F0441]
Length = 450
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 146/300 (48%), Gaps = 29/300 (9%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L G V++E++ A + SI + +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LAKGIPVLTEVELAYLISEASI--IGITGSNGKTTTTTMIGEVLTAAGQHGLLSGNIGYP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A A + V+E+SS+Q+ + + F P ++V+ NL P H++ H + +
Sbjct: 151 ASQVAQTATAKDT-------LVMELSSFQL-MGVQEFHPEIAVITNLMPTHIDYHGSFEA 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKID---TEAKTAS 198
Y K ++ ++M +L F NQ L + + + + K+D E
Sbjct: 203 YVAAKWNIQNNMTAADFLVLNF-NQDLAKEL-ATKTQATVVPFSTKEKVDGAYLENGQLY 260
Query: 199 FEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHR 258
F V S++ V G HN N A+A ++V L GVD + + T+ HR
Sbjct: 261 FRGEVVMTASEI-----GVPGSHNVEN-ALATIAVAKLR-GVDNQIIKETLSAFGGVKHR 313
Query: 259 MQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
+Q V +I+GV + +DSK+TN+ AT L K +++ GG + N F++L+
Sbjct: 314 LQFVD-EIKGVKFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------GNEFDELV 366
>gi|227494646|ref|ZP_03924962.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Actinomyces
coleocanis DSM 15436]
gi|226831828|gb|EEH64211.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Actinomyces
coleocanis DSM 15436]
Length = 494
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 134/312 (42%), Gaps = 57/312 (18%)
Query: 28 VMSELDFAAQV---IPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSE 84
V SE++ A Q+ + + IK LA+TGTNGK+T V VG +L G + V GN+G P+
Sbjct: 103 VWSEVELAWQIQHTLGKDIKWLAITGTNGKTTTVGLVGSILEAAGAKYAVVGNVGEPIVT 162
Query: 85 AAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYAL 144
K +V VE+SS+Q+E + P +V LN+ DHL+ H +++NY
Sbjct: 163 TVL--------KADVEVLAVELSSFQLETTHT-LSPLAAVCLNVDADHLDWHGSVENYRD 213
Query: 145 TKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEV--P 202
K ++ NT++G + E + G ++ A+ + + P
Sbjct: 214 AKARIYE---NTQVGCVYDVTDRTVENM------------VAGAEVIEGARAIGYTLGSP 258
Query: 203 A---VGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGL---------------------DI 238
A +G+V +L + V RH+ A + G
Sbjct: 259 APSQIGLVEKLLVDRAFVENRHHQAEAVAEISDIFGFASEHPSIALVKDTLAAIALTRAY 318
Query: 239 GVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVIL 298
GV EA+ + + ++ HR ++ + V W+DDSKATN A L V +
Sbjct: 319 GVSGEAVAAGLRNFKSAKHRRAVIGKTAD-VVWIDDSKATNTHAAKASLAGFPPQSVVWI 377
Query: 299 LGGQAKVLNGQE 310
GG K GQE
Sbjct: 378 AGGDTK---GQE 386
>gi|418166309|ref|ZP_12802965.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA17971]
gi|353829905|gb|EHE10035.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA17971]
Length = 450
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 146/297 (49%), Gaps = 23/297 (7%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L G V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LAKGIPVLTEVELAYLI--SEAPIIGITGSNGKTTTTTMIGEVLTAAGQHGLLSGNIGYP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A + + K V+E+SS+Q+ + + F P ++V+ NL P H++ H +
Sbjct: 151 ASQVA----QIATDK---NTLVMELSSFQL-MGVQEFHPEIAVITNLMPTHIDYHGLFEE 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEV 201
Y K ++ + M +L F NQ L + + A + F ++ A ++
Sbjct: 203 YVAAKWNIQNKMTAADFLVLNF-NQDLAKDLASK--TEATVVPFSTLEKVDGAYLEDGQL 259
Query: 202 PAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQI 261
G V + + + V G HN N A+A ++V L GVD + + T+ HR+Q
Sbjct: 260 YFRGEVV-MAANEIGVPGSHNVEN-ALATIAVAKLR-GVDNQTIKETLSAFGGVKHRLQF 316
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
V DI+GV + +DSK+TN+ AT L K V++ GG + N F++L+
Sbjct: 317 VD-DIKGVKFYNDSKSTNILATQKALSGFDNSKVVLIAGGLDR------GNEFDELV 366
>gi|225860677|ref|YP_002742186.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
pneumoniae Taiwan19F-14]
gi|298229802|ref|ZP_06963483.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
pneumoniae str. Canada MDR_19F]
gi|298254818|ref|ZP_06978404.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
pneumoniae str. Canada MDR_19A]
gi|298502480|ref|YP_003724420.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
pneumoniae TCH8431/19A]
gi|387787859|ref|YP_006252927.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae ST556]
gi|417312264|ref|ZP_12098980.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA04375]
gi|417686144|ref|ZP_12335422.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA41301]
gi|417695848|ref|ZP_12345028.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA47368]
gi|418082571|ref|ZP_12719773.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA44288]
gi|418084770|ref|ZP_12721956.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA47281]
gi|418091305|ref|ZP_12728450.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA44452]
gi|418100543|ref|ZP_12737631.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae 7286-06]
gi|418107064|ref|ZP_12744104.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA41410]
gi|418109649|ref|ZP_12746678.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA49447]
gi|418118629|ref|ZP_12755589.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA18523]
gi|418150258|ref|ZP_12787013.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA14798]
gi|418156982|ref|ZP_12793700.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA16833]
gi|418159338|ref|ZP_12796041.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA17227]
gi|418168782|ref|ZP_12805428.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA19077]
gi|418170909|ref|ZP_12807536.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA19451]
gi|418195720|ref|ZP_12832200.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA47688]
gi|418197592|ref|ZP_12834057.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA47778]
gi|418220613|ref|ZP_12847269.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA47751]
gi|418222965|ref|ZP_12849610.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae 5185-06]
gi|418227283|ref|ZP_12853903.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae 3063-00]
gi|419422185|ref|ZP_13962404.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA43264]
gi|419424727|ref|ZP_13964928.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae 7533-05]
gi|419426853|ref|ZP_13967036.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae 5652-06]
gi|419435569|ref|ZP_13975665.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae 8190-05]
gi|419437649|ref|ZP_13977722.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA13499]
gi|419444309|ref|ZP_13984324.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA19923]
gi|419446430|ref|ZP_13986435.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae 7879-04]
gi|419449115|ref|ZP_13989112.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae 4075-00]
gi|419450671|ref|ZP_13990658.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae EU-NP02]
gi|419488318|ref|ZP_14028071.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA44386]
gi|419501435|ref|ZP_14041121.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA47628]
gi|419520641|ref|ZP_14060238.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA05245]
gi|419527533|ref|ZP_14067077.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA17719]
gi|421272333|ref|ZP_15723180.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae SPAR55]
gi|421287184|ref|ZP_15737950.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA58771]
gi|254766062|sp|C1CQG4.1|MURD_STRZT RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|225728254|gb|ACO24105.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae Taiwan19F-14]
gi|298238075|gb|ADI69206.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
pneumoniae TCH8431/19A]
gi|327390416|gb|EGE88757.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA04375]
gi|332075981|gb|EGI86447.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA41301]
gi|332203845|gb|EGJ17912.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA47368]
gi|353758008|gb|EHD38601.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA44288]
gi|353760005|gb|EHD40587.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA47281]
gi|353766678|gb|EHD47218.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA44452]
gi|353773252|gb|EHD53751.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae 7286-06]
gi|353780541|gb|EHD60998.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA41410]
gi|353784942|gb|EHD65362.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA49447]
gi|353792214|gb|EHD72587.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA18523]
gi|353817379|gb|EHD97583.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA14798]
gi|353825003|gb|EHE05170.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA16833]
gi|353825207|gb|EHE05373.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA17227]
gi|353836701|gb|EHE16789.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA19077]
gi|353837079|gb|EHE17165.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA19451]
gi|353862247|gb|EHE42180.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA47688]
gi|353864792|gb|EHE44703.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA47778]
gi|353877482|gb|EHE57325.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA47751]
gi|353880237|gb|EHE60053.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae 5185-06]
gi|353883656|gb|EHE63462.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae 3063-00]
gi|379137601|gb|AFC94392.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Streptococcus
pneumoniae ST556]
gi|379540357|gb|EHZ05530.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA13499]
gi|379540544|gb|EHZ05716.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA05245]
gi|379566478|gb|EHZ31466.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA17719]
gi|379572002|gb|EHZ36959.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA19923]
gi|379589516|gb|EHZ54355.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA43264]
gi|379590433|gb|EHZ55271.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA44386]
gi|379601796|gb|EHZ66568.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA47628]
gi|379613970|gb|EHZ78680.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae 7879-04]
gi|379617238|gb|EHZ81931.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae 8190-05]
gi|379618306|gb|EHZ82981.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae 5652-06]
gi|379620627|gb|EHZ85282.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae 7533-05]
gi|379624173|gb|EHZ88806.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae 4075-00]
gi|379624570|gb|EHZ89201.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae EU-NP02]
gi|395877892|gb|EJG88961.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae SPAR55]
gi|395889593|gb|EJH00600.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA58771]
Length = 450
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 146/297 (49%), Gaps = 23/297 (7%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L G V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LAKGIPVLTEVELAYLI--SEAPIIGITGSNGKTTTTTMIGEVLTAAGQHGLLSGNIGYP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A + + K V+E+SS+Q+ + + F P ++V+ NL P H++ H +
Sbjct: 151 ASQVA----QIATDK---NTLVMELSSFQL-MGVQEFHPEIAVITNLMPTHIDYHGLFEE 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEV 201
Y K ++ + M +L F NQ L + + A + F ++ A ++
Sbjct: 203 YVAAKWNIQNKMAAADFLVLNF-NQDLAKDLASK--TEATVVPFSTLEKVDGAYLEDGQL 259
Query: 202 PAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQI 261
G V + + + V G HN N A+A ++V L GVD + + T+ HR+Q
Sbjct: 260 YFRGEVV-MAANEIGVPGSHNVEN-ALATIAVAKLR-GVDNQTIKETLSAFGGVKHRLQF 316
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
V DI+GV + +DSK+TN+ AT L K V++ GG + N F++L+
Sbjct: 317 VD-DIKGVKFYNDSKSTNILATQKALSGFDNSKVVLIAGGLDR------GNEFDELV 366
>gi|392957433|ref|ZP_10322956.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Bacillus
macauensis ZFHKF-1]
gi|391876396|gb|EIT84993.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Bacillus
macauensis ZFHKF-1]
Length = 450
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 151/313 (48%), Gaps = 47/313 (15%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V++E++ A +V + +A+TG+NGK+T T +G+M+ G V GN+G LSE A
Sbjct: 99 VITEVEIAGEV--AEAETIAITGSNGKTTTTTLIGEMMKDSGRTPIVAGNIGTVLSEVA- 155
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
+ K + + E+SS+Q+ + ++ P ++V+LN+ HL+ H T+ YA K
Sbjct: 156 ------DASTKDDLLIAELSSFQL-MGTIHYAPKIAVLLNIFEAHLDYHGTLDEYAKAKG 208
Query: 148 HLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVV 207
+F++ +T + ++ + +KG + GVK+ + + + P G +
Sbjct: 209 RIFANQKSTDFAVYNADDEKVVSLVKGTQ----------GVKVPF---STTQDCPTGGCI 255
Query: 208 SQ--LQLHNMKVM--------GRHNYHN--AAVAALSVLGLDIGVDVEALNSTIEILRTP 255
L KV+ G+HN N AAV A ++LG G E + + +
Sbjct: 256 KDGVLYFKGEKVISEREIVLPGKHNKENILAAVCA-ALLG---GAKKEQIVAVLTSFTGV 311
Query: 256 PHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFE 315
HR+Q V I G + +DSKATN+ AT + + + ++L GG + N F+
Sbjct: 312 KHRLQFVEM-IAGRKFYNDSKATNILATQAAISAFE-QEIILLAGGLDR------GNEFD 363
Query: 316 KLIEPLNHHRCVI 328
+LI L + +I
Sbjct: 364 ELIPQLKSVKTLI 376
>gi|389685757|ref|ZP_10177080.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Pseudomonas
chlororaphis O6]
gi|388550099|gb|EIM13369.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Pseudomonas
chlororaphis O6]
Length = 448
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 143/297 (48%), Gaps = 44/297 (14%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+A++G+N KSTV T VG+M G VGGNLG P AL ++ V+
Sbjct: 111 IVAISGSNAKSTVTTLVGEMAAAAGKRVAVGGNLGTP---------ALDLLSDDVELYVM 161
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFG 164
E+SS+Q+E ++ V+ VLN++ DH++R+ + Y HL H + + F
Sbjct: 162 ELSSFQLETTDQ-LGAEVATVLNISEDHMDRYSGLPAY-----HLAKHRIFRGARQVVFN 215
Query: 165 NQH------LNEAIKGHRFNLAW--IGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMK 216
Q + E + F L+ AF G++ + K +FE + + + +K
Sbjct: 216 RQDALTRPLIGEGLPCWTFGLSKPDFKAF-GLREENGEKYLAFEFQNL-----MPVRELK 269
Query: 217 VMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSK 276
+ G HN NA A G +G+ +A+ S + HR Q V RD+ GV + +DSK
Sbjct: 270 IRGAHNQSNALAALAL--GHAVGLPFDAMLSALRTFAGLEHRCQWV-RDLDGVGYYNDSK 326
Query: 277 ATNLEATCTGL----MDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPLNHH-RCVI 328
ATN+ A + D++G K V++ GG K G E F+ L +P+ + R VI
Sbjct: 327 ATNVGAALAAIEGLGADIEG-KIVLIAGGDGK---GAE---FKDLRDPVAANCRAVI 376
>gi|422315209|ref|ZP_16396648.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Fusobacterium
periodonticum D10]
gi|404592749|gb|EKA94504.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Fusobacterium
periodonticum D10]
Length = 432
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 149/315 (47%), Gaps = 47/315 (14%)
Query: 9 LEFQLKATGLAC------LLQSGKRVMSELDFAAQVIPRS---IKILAVTGTNGKSTVVT 59
+EF +K+ G+ + + G +V+ E++ A + KI+A+TGTNGKST
Sbjct: 48 IEFFIKSPGIPYNDFVKEVQKRGIKVLDEIEVAYNYMVEKNLKTKIIAITGTNGKSTTTA 107
Query: 60 FVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQME-IPNKYF 118
+ +LN+ G +A GN+G LSEA H + +E+SS+Q+E + N F
Sbjct: 108 KISDLLNYAGYKACYAGNIGRSLSEALLH-------EKDLDFVSLELSSFQLENVEN--F 158
Query: 119 CPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFGNQHLN---EAIKGH 175
P +S+++N+ PDH+ER+K+ Y TK ++ + + + + + + IK
Sbjct: 159 RPYISMIINMGPDHIERYKSFDEYYDTKFNIAKNQDENQYFIENIDDVEIEKRAKQIKAK 218
Query: 176 RFNLAWIGAFPGVKIDTEAKTASFEVPA----VGVVSQLQLHNMKVMGRHNYHNA--AVA 229
R ++ +++K A+ V VG ++ + + G HN N VA
Sbjct: 219 RISV------------SKSKEANIYVEDNKIYVGKDFIIEADKLSLKGIHNLENTLFMVA 266
Query: 230 ALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMD 289
+L +D E L + + HR ++ + V +++DSKATN+++T +
Sbjct: 267 TAEIL----NIDREKLKEFLMVATPLEHRTELFF-NYGKVKFINDSKATNVDSTKFAIQA 321
Query: 290 LKGHKCVILLGGQAK 304
K +++ GG K
Sbjct: 322 NKN--SILICGGYDK 334
>gi|419428954|ref|ZP_13969123.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA11856]
gi|379552214|gb|EHZ17304.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA11856]
Length = 450
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 146/297 (49%), Gaps = 23/297 (7%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L G V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LAKGIPVLTEVELAYLI--SEAPIIGITGSNGKTTTTTMIGEVLTAAGQHGLLSGNIGYP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A + + K V+E+SS+Q+ + + F P ++V+ NL P H++ H +
Sbjct: 151 ASQVA----QISTDK---NTLVMELSSFQL-MGVQEFHPEIAVITNLMPTHIDYHGLFEE 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEV 201
Y K ++ + M +L F NQ L + + A + F ++ A ++
Sbjct: 203 YVAAKWNIQNKMAAADFLVLNF-NQDLAKDLASK--TEATVVPFSTLEKVDGAYLEDGQL 259
Query: 202 PAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQI 261
G V + + + V G HN N A+A ++V L GVD + + T+ HR+Q
Sbjct: 260 YFRGEVV-MAANEIGVPGSHNVEN-ALATIAVAKLR-GVDNQTIKETLSAFGGVKHRLQF 316
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
V DI+GV + +DSK+TN+ AT L K V++ GG + N F++L+
Sbjct: 317 VD-DIKGVKFYNDSKSTNILATQKALSGFDNSKVVLIAGGLDR------GNEFDELV 366
>gi|423334585|ref|ZP_17312364.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Parabacteroides
distasonis CL03T12C09]
gi|409225776|gb|EKN18694.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Parabacteroides
distasonis CL03T12C09]
Length = 441
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 154/333 (46%), Gaps = 61/333 (18%)
Query: 14 KATGLACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAF 73
KA + L + G ++SE++FA + K++ +TG+NGK+T +L G++
Sbjct: 72 KAPIIQLLKKQGTPIISEIEFAGRYTDS--KMICITGSNGKTTTTMLTYHILKEAGVDVG 129
Query: 74 VGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDH 132
+ GN+GN L AL ++ V V+E+SS+Q++ N Y F ++++LN+TPDH
Sbjct: 130 LAGNVGNSL--------ALQVAEDPHAVYVIELSSFQLD--NMYDFKADIAIILNITPDH 179
Query: 133 LERHK-TMKNYALTKCHLFSHMVNT---------------------KLGLLPFGNQHLNE 170
L+R+ M+NY K + + + L PF H N
Sbjct: 180 LDRYNYEMQNYVDAKFRILQNQTKDDAFIFWNDDPIIAREIAKRHPEATLYPFAETHEN- 238
Query: 171 AIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAA 230
+KG+ N V I+T T + E + + G HN +N+ +
Sbjct: 239 GMKGYTEN-------NQVVIETANGTFTMEQDLLALT-----------GTHNLYNSLASG 280
Query: 231 LSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDL 290
++ +DI E + +++ HR++ V R ++GV +++DSKATN+ + L +
Sbjct: 281 IASKIVDIH--DEKIRASLSDFTGVEHRLEKVLR-VRGVDYINDSKATNVNSCWYALQSM 337
Query: 291 KGHKCVILLGGQAKVLNGQESNGFEKLIEPLNH 323
V++LGG K G + + E+L+ H
Sbjct: 338 TT-PVVLILGGTDK---GNDYSEIEELVSKKVH 366
>gi|398978390|ref|ZP_10687765.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Pseudomonas sp.
GM25]
gi|398137190|gb|EJM26256.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Pseudomonas sp.
GM25]
Length = 448
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 142/295 (48%), Gaps = 40/295 (13%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+A++G+N KSTV T VG+M G VGGNLG P AL ++ V+
Sbjct: 111 IVAISGSNAKSTVTTLVGEMAAAAGKRVAVGGNLGTP---------ALDLLSDDVELYVM 161
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLF----SHMVNTKLGL 160
E+SS+Q+E ++ V+ VLN++ DH++R+ + Y L K +F +VN + L
Sbjct: 162 ELSSFQLETTDQ-LNAEVATVLNISEDHMDRYSGLPAYHLAKHRIFRGAKQFVVNRQDAL 220
Query: 161 LPFGNQHLNEAIKGHRFNLAW--IGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVM 218
+ E F L AF G++ + K +FE + + + +K+
Sbjct: 221 T---RPLMGEGQPCWTFGLTKPDFKAF-GLREENGEKYLAFEFQNL-----MPVRELKIR 271
Query: 219 GRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKAT 278
G HN NA A G +G+ +A+ + + HR Q V RD+ GV + +DSKAT
Sbjct: 272 GAHNQSNALAALAL--GHAVGLPFDAMLAALRTFAGLEHRCQWV-RDLDGVGYYNDSKAT 328
Query: 279 NLEATCTGL----MDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPLNHH-RCVI 328
N+ A + D+ G K V++ GG K G E F+ L +P+ H R VI
Sbjct: 329 NVGAALAAIEGLGADIDG-KVVLIAGGDGK---GAE---FKDLRDPVAAHCRAVI 376
>gi|450068040|ref|ZP_21846964.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans NLML9]
gi|449207728|gb|EMC08396.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
mutans NLML9]
Length = 451
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 151/300 (50%), Gaps = 29/300 (9%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L+ V++E++ A + I+ +TG+NGK+T T + +LNH G A + GN+G P
Sbjct: 93 LEKNIPVITEVELAYLI--SEAPIIGITGSNGKTTTTTMIADVLNHAGQSARLSGNIGFP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
SE +A P ++ + V+E+SS+Q+ + + F P ++V+ NL P H++ H + +N
Sbjct: 151 ASE-----VAQPVTEK--DILVMELSSFQL-MGTESFHPHMAVITNLMPTHIDYHGSFEN 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKID---TEAKTAS 198
Y K ++ +M +L F NQ L + + ++ I K+D + +
Sbjct: 203 YIEAKWNIQKNMTEKDFLVLNF-NQDLAKDL-ANQTQAKIIPFSTKEKVDGAYLDGQMLC 260
Query: 199 FEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHR 258
F+ A+ S+L V G HN N A+A ++V L GV EA+ T+ HR
Sbjct: 261 FKGQAIMSASEL-----GVPGSHNVEN-ALATIAVAKLS-GVSNEAIRETLIHFGGVKHR 313
Query: 259 MQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
+Q + +I V + +DSK+TN+ AT L K +++ GG + N F++L+
Sbjct: 314 LQSLG-NIADVKFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------GNEFDELV 366
>gi|150009088|ref|YP_001303831.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Parabacteroides
distasonis ATCC 8503]
gi|149937512|gb|ABR44209.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Parabacteroides
distasonis ATCC 8503]
Length = 445
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 154/333 (46%), Gaps = 61/333 (18%)
Query: 14 KATGLACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAF 73
KA + L + G ++SE++FA + K++ +TG+NGK+T +L G++
Sbjct: 76 KAPIIQLLKKQGTPIISEIEFAGRYTDS--KMICITGSNGKTTTTMLTYHILKEAGVDVG 133
Query: 74 VGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDH 132
+ GN+GN L AL ++ V V+E+SS+Q++ N Y F ++++LN+TPDH
Sbjct: 134 LAGNVGNSL--------ALQVAEDPHAVYVIELSSFQLD--NMYDFKADIAIILNITPDH 183
Query: 133 LERHK-TMKNYALTKCHLFSHMVNT---------------------KLGLLPFGNQHLNE 170
L+R+ M+NY K + + + L PF H N
Sbjct: 184 LDRYNYEMQNYVDAKFRILQNQTKDDAFIFWNDDPIIAREIAKRHPEATLYPFAETHEN- 242
Query: 171 AIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAA 230
+KG+ N V I+T T + E + + G HN +N+ +
Sbjct: 243 GMKGYTEN-------NQVVIETANGTFTMEQDLLALT-----------GTHNLYNSLASG 284
Query: 231 LSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDL 290
++ +DI E + +++ HR++ V R ++GV +++DSKATN+ + L +
Sbjct: 285 IASKIVDIH--DEKIRASLSDFTGVEHRLEKVLR-VRGVDYINDSKATNVNSCWYALQSM 341
Query: 291 KGHKCVILLGGQAKVLNGQESNGFEKLIEPLNH 323
V++LGG K G + + E+L+ H
Sbjct: 342 TT-PVVLILGGTDK---GNDYSEIEELVSKKVH 370
>gi|153809197|ref|ZP_01961865.1| hypothetical protein BACCAC_03508 [Bacteroides caccae ATCC 43185]
gi|423220326|ref|ZP_17206821.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides caccae
CL03T12C61]
gi|149128173|gb|EDM19393.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Bacteroides
caccae ATCC 43185]
gi|392623403|gb|EIY17506.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides caccae
CL03T12C61]
Length = 444
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 147/302 (48%), Gaps = 24/302 (7%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
L G V+SE++FA + K++ +TG+NGK+T + + + G+ + GN+G
Sbjct: 82 LKAQGTPVISEIEFAGRYT--DAKMICITGSNGKTTTTSLIYHIFKSAGLNVGLAGNIGK 139
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDHLERHK-T 138
L AL ++ ++E+SS+Q++ N Y F ++V++N+TPDHL+R+
Sbjct: 140 SL--------ALQVAEDHHDYYIIELSSFQLD--NMYNFRANIAVLMNITPDHLDRYDHC 189
Query: 139 MKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTE-AKTA 197
M+NY K + + + + + + H A + F VK D A
Sbjct: 190 MQNYIDAKFRITQNQTPDDAFIFWNDDPIIRHELAKHGLK-AHLYPFAAVKEDGAIAYVE 248
Query: 198 SFEVPAVGVVS-QLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPP 256
EV ++ ++ + + G+HN +N+ A +S L G+ E + + R
Sbjct: 249 DHEVKITEPIAFNMEQEELALTGQHNLYNSLAAGISA-NL-AGIAKENIRKALSDFRGVE 306
Query: 257 HRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEK 316
HR++ V R ++G+ +++DSKATN+ + L + K V++LGG+ K G + E
Sbjct: 307 HRLEKVAR-VRGIDFINDSKATNVNSCWYALQSMTT-KTVLILGGKDK---GNDYTEIED 361
Query: 317 LI 318
L+
Sbjct: 362 LV 363
>gi|189464537|ref|ZP_03013322.1| hypothetical protein BACINT_00879 [Bacteroides intestinalis DSM
17393]
gi|189438327|gb|EDV07312.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Bacteroides
intestinalis DSM 17393]
Length = 444
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 147/305 (48%), Gaps = 30/305 (9%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
L + G ++SE++FA + + K++ +TG+NGK+T + + + G+ + GN+G
Sbjct: 82 LKEQGTPIISEIEFAGRYT--NAKMICITGSNGKTTTTSLIYHIFKSAGLNVGLAGNIGK 139
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDHLERHK-T 138
L AL + + V+E+SS+Q++ N Y F ++V++N+TPDHL+R+
Sbjct: 140 SL--------ALQVATDQHDYYVIELSSFQLD--NMYKFRANIAVLMNITPDHLDRYDHC 189
Query: 139 MKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKID-----TE 193
M+NY K + + + + + + H A + F VK D E
Sbjct: 190 MQNYVDAKFRITQNQTPEDAFIFWNDDPIIKRELDKHGLR-AHLYPFSAVKEDGAIAYVE 248
Query: 194 AKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILR 253
P + ++ + + G HN +N+ A +S L G++ E + + +
Sbjct: 249 DGEVEINEP---IAFNMEQEKLALQGTHNLYNSLAAGISA-NL-AGIEKEYIRRALSDFK 303
Query: 254 TPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNG 313
HR++ V ++GV +++DSKATN+ + L +K K V++LGG+ K G +
Sbjct: 304 GVEHRLEKVAT-VRGVEFINDSKATNVNSCWYALQSMKT-KTVLILGGKDK---GNDYTE 358
Query: 314 FEKLI 318
E L+
Sbjct: 359 IEDLV 363
>gi|30316070|sp|Q8RDQ1.2|MURD_FUSNN RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
Length = 432
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 144/308 (46%), Gaps = 33/308 (10%)
Query: 9 LEFQLKATGLAC------LLQSGKRVMSELDFAAQ-VIPRSIK--ILAVTGTNGKSTVVT 59
LEF +K+ G+ + + G +++ E++ A +I + +K I+A+TGTNGKST
Sbjct: 48 LEFFIKSPGIPYNDFVKEVQKRGIKILDEIEIAYNYMIEKGLKTKIIAITGTNGKSTTTA 107
Query: 60 FVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQME-IPNKYF 118
+ MLNH G +A GN+G LSE + +E+SS+Q+E I N F
Sbjct: 108 KISDMLNHAGYKATYAGNIGRSLSEVLL-------KEKDLDFISLELSSFQLENIEN--F 158
Query: 119 CPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFN 178
P +S+++N+ PDH+ER+K+ Y TK ++ + + ++ + + K +
Sbjct: 159 KPCISMIINIGPDHIERYKSFDEYYNTKFNITKNQTEDLYFIENIDDEEIEKRAKQIKAK 218
Query: 179 LAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNA--AVAALSVLGL 236
+ F I E + + V +L L G HN N VA +L L
Sbjct: 219 RISVSKFKKADIFVENDKIYHDKDDIIDVDKLSLK-----GIHNLENTLFMVATAEILKL 273
Query: 237 DIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCV 296
D E L + I HR ++ + + +++DSKATN+++T + K +
Sbjct: 274 ----DREKLKEFLMIATPLEHRTELFF-NYGKLKFINDSKATNVDSTKFAIQANKN--SI 326
Query: 297 ILLGGQAK 304
++ GG K
Sbjct: 327 LICGGYDK 334
>gi|383934182|ref|ZP_09987624.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Rheinheimera
nanhaiensis E407-8]
gi|383704638|dbj|GAB57715.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Rheinheimera
nanhaiensis E407-8]
Length = 446
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 139/296 (46%), Gaps = 51/296 (17%)
Query: 25 GKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSE 84
G ++M +++ A+V + ++A+TG+NGKSTV V ML G++A N+G P+ +
Sbjct: 97 GAQLMGDVELFARVNQK--PVVAITGSNGKSTVTMLVEAMLKASGVKALAAANIGLPVLD 154
Query: 85 AAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYAL 144
A ++ +V V+E+SS+Q++ + S +LN++ DHL+R+ M YA
Sbjct: 155 AL--------AQSDVEVFVLELSSFQLDTTSSLHS-LASCILNVSADHLDRYGDMAAYAA 205
Query: 145 TKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAV 204
+K ++ H ++L + + GH G+K+ A
Sbjct: 206 SKQRVYQH---SQLAVFNLDDAATIPQHAGHSL---------GIKLSDG---------AY 244
Query: 205 GVVSQ-------------LQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEI 251
G+VSQ L L+ M + G HN NA VA L D L + ++
Sbjct: 245 GIVSQAGQRWLQVAGEPLLPLNEMTLFGEHNQFNALVACALALAAGASRD--GLKTALKQ 302
Query: 252 LRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLK---GHKCVILLGGQAK 304
+ PHR +V GV W++DSKATN+ AT + L+ K +++ GG AK
Sbjct: 303 FVSLPHRCILVAEH-NGVRWINDSKATNIGATLAAIAGLRPTVAGKLILIAGGDAK 357
>gi|229588488|ref|YP_002870607.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Pseudomonas
fluorescens SBW25]
gi|229360354|emb|CAY47211.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Pseudomonas
fluorescens SBW25]
Length = 448
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 144/295 (48%), Gaps = 40/295 (13%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+A++G+N KSTV T VG+M G VGGNLG P AL ++ V+
Sbjct: 111 IVAISGSNAKSTVTTLVGEMAVAAGKRVAVGGNLGTP---------ALDLLSDDIELYVM 161
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSH----MVNTKLGL 160
E+SS+Q+E + V+ VLN++ DH++R+ + Y L K +F +VN + L
Sbjct: 162 ELSSFQLETTHD-LGAEVATVLNVSEDHMDRYSGLPAYHLAKHRIFRGAKQVVVNRQDAL 220
Query: 161 LPFGNQHLNEAIKGHRFNLAW--IGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVM 218
+ E + F L+ AF G++ + K +FE + + + +K+
Sbjct: 221 ---SRPLMGEGLPCWTFGLSKPDFKAF-GIREEHGEKYLAFEFQNL-----MPVRELKIR 271
Query: 219 GRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKAT 278
G HN NA A G +G+ +A+ S++ HR Q V RD+ GV++ +DSKAT
Sbjct: 272 GAHNQSNALAALAL--GHAVGLPFDAMLSSLRTFGGLEHRCQWV-RDLDGVSYYNDSKAT 328
Query: 279 NLEATCTGL----MDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPLNHH-RCVI 328
N+ A + D++G K V++ GG K + F+ L P+ H R V+
Sbjct: 329 NVGAALAAIEGLGADIEG-KLVLIAGGDGKGAD------FKDLKGPVATHCRAVV 376
>gi|335040563|ref|ZP_08533689.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Caldalkalibacillus
thermarum TA2.A1]
gi|334179533|gb|EGL82172.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Caldalkalibacillus
thermarum TA2.A1]
Length = 450
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 119/259 (45%), Gaps = 14/259 (5%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+ +TG+NGK+T T + +ML + GN+G E A ++P Q V
Sbjct: 108 IIGITGSNGKTTTTTLIYEMLKDSDPPPLIAGNIGTVFCEVA------ARARPG-QWLVT 160
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFG 164
E+SS+Q++ F P + V+LN+ HL+ H T + Y K LF++ L +
Sbjct: 161 ELSSFQLQ-GTTAFHPKIGVLLNIFDAHLDYHGTKQAYIEAKAKLFANQTPDDLAVFNLD 219
Query: 165 NQHLNEAIKGHRFNLAWIG--AFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHN 222
+ + + W + P E + V L + +++ G HN
Sbjct: 220 QEETRRVADAVKAQVVWFSTRSHPERGAYVEDGRIKYRNKLGEVTDVLAANEVRLPGTHN 279
Query: 223 YHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEA 282
N VAA++V L+ G +E + + PHR+Q V R+++GV + +DSKATN A
Sbjct: 280 LEN-VVAAVAV-SLEAGAKLERVREVLRNFTGVPHRLQFV-RELRGVRYYNDSKATNALA 336
Query: 283 TCTGLMDLKGHKCVILLGG 301
T L G + V++ GG
Sbjct: 337 TKKALESFSG-RVVLIAGG 354
>gi|332187168|ref|ZP_08388908.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Sphingomonas sp.
S17]
gi|332012868|gb|EGI54933.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Sphingomonas sp.
S17]
Length = 429
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 116/248 (46%), Gaps = 38/248 (15%)
Query: 44 KILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP-LSEAAFHCIALPSSKPKFQVA 102
K++ +TGTNGKST V +L G+ +GGN+G P L +A P+ V
Sbjct: 110 KVVGITGTNGKSTTTALVHHILKTAGVPTLMGGNIGLPILGQAPL---------PEGGVY 160
Query: 103 VVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLP 162
V+E+SSYQ+++ C V+V+LN+TPDHL+R+ YA +K LF+ + ++
Sbjct: 161 VLELSSYQIDLTQSLDC-DVAVLLNITPDHLDRYDGFAGYAASKARLFAMQTAGHVAVVG 219
Query: 163 FGNQ---HLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMG 219
G++ ++ + + G +L I P ID A LH
Sbjct: 220 TGDEASANIAQGLAGRTDDLVTIA--PDTVIDQRRWPA--------------LHGPHNAQ 263
Query: 220 RHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATN 279
A AL G+D A+ + + + PHRMQ V GV +V+DSKATN
Sbjct: 264 NAQAAIAVTRAL-------GIDEAAIEAGLASYASLPHRMQHVATR-NGVAFVNDSKATN 315
Query: 280 LEATCTGL 287
E+T L
Sbjct: 316 PESTAPAL 323
>gi|219681589|ref|YP_002467975.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Buchnera
aphidicola str. 5A (Acyrthosiphon pisum)]
gi|219682147|ref|YP_002468531.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Buchnera
aphidicola str. Tuc7 (Acyrthosiphon pisum)]
gi|257471275|ref|ZP_05635274.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Buchnera
aphidicola str. LSR1 (Acyrthosiphon pisum)]
gi|384226027|ref|YP_005617190.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Buchnera
aphidicola str. TLW03 (Acyrthosiphon pisum)]
gi|384226562|ref|YP_005618313.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Buchnera
aphidicola str. JF98 (Acyrthosiphon pisum)]
gi|384227083|ref|YP_005618833.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Buchnera
aphidicola str. LL01 (Acyrthosiphon pisum)]
gi|414562578|ref|YP_005617769.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Buchnera
aphidicola str. JF99 (Acyrthosiphon pisum)]
gi|254766040|sp|B8D916.1|MURD_BUCA5 RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|254766041|sp|B8D7C1.1|MURD_BUCAT RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|219621880|gb|ACL30036.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Buchnera aphidicola
str. Tuc7 (Acyrthosiphon pisum)]
gi|219624432|gb|ACL30587.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Buchnera aphidicola
str. 5A (Acyrthosiphon pisum)]
gi|311085959|gb|ADP66041.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Buchnera
aphidicola str. LL01 (Acyrthosiphon pisum)]
gi|311086534|gb|ADP66615.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Buchnera
aphidicola str. TLW03 (Acyrthosiphon pisum)]
gi|311087114|gb|ADP67194.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Buchnera
aphidicola str. JF99 (Acyrthosiphon pisum)]
gi|311087659|gb|ADP67738.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Buchnera
aphidicola str. JF98 (Acyrthosiphon pisum)]
Length = 440
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 156/295 (52%), Gaps = 42/295 (14%)
Query: 25 GKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSE 84
G ++S+++ ++ + + I+++TGTNGKSTV T + ++ G +AF+GGN+G P+ E
Sbjct: 90 GIEIISDIELFSREV--TCPIISITGTNGKSTVATMIEKIAKKSGYKAFLGGNIGVPVLE 147
Query: 85 AAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPT-VSVVLNLTPDHLERHKT-MKNY 142
+ + ++E+SS+Q+E N + + ++V+LN++ DH+ R+ + Y
Sbjct: 148 IL---------DKEADLYIIELSSFQLE--NTFNLKSKIAVILNISEDHINRYPNGFQQY 196
Query: 143 ALTKCHLFSH----MVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTAS 198
TK +++ ++N+ N + +++ H N WI +F + D + S
Sbjct: 197 KNTKLSVYNQAEICIINS--------NDKIEKSLI-HSKNKKWI-SFGTNRSDYRICSKS 246
Query: 199 FEVPAVGVVSQLQLHNMKVM--GRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRT-- 254
+ P + ++ L+ +++ G HNY+N V+ L + + N I +L++
Sbjct: 247 ND-PILFFKNKKILNTSEILLYGYHNYNNILVS----LAISDAMQFPR-NDAINVLKSFS 300
Query: 255 -PPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCV-ILLGGQAKVLN 307
PHR QI+ + +GV W++DSK+TN+ +T L +K + +LLGG +K N
Sbjct: 301 NLPHRFQIIKNE-KGVRWINDSKSTNVNSTQVALNSIKTTGTIRLLLGGDSKSAN 354
>gi|399008629|ref|ZP_10711099.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Pseudomonas sp.
GM17]
gi|398116065|gb|EJM05836.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Pseudomonas sp.
GM17]
Length = 448
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 143/297 (48%), Gaps = 44/297 (14%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+A++G+N KSTV T VG+M G VGGNLG P AL ++ V+
Sbjct: 111 IVAISGSNAKSTVTTLVGEMAAAAGKRVAVGGNLGTP---------ALDLLSDDVELYVM 161
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFG 164
E+SS+Q+E ++ V+ VLN++ DH++R+ + Y HL H + + F
Sbjct: 162 ELSSFQLETTDQ-LGAEVATVLNISEDHMDRYSGLPAY-----HLAKHRIFRGARQVVFN 215
Query: 165 NQH------LNEAIKGHRFNLAW--IGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMK 216
Q + E + F L+ AF G++ + K +FE + + + +K
Sbjct: 216 RQDALTRPLIGEGLPCWTFGLSKPDFKAF-GLREENGEKYLAFEFQNL-----MPVRELK 269
Query: 217 VMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSK 276
+ G HN NA A G +G+ +A+ S + HR Q V RD+ GV + +DSK
Sbjct: 270 IRGAHNQSNALAALAL--GHAVGLPFDAMLSALRTFAGLEHRCQWV-RDLDGVGYYNDSK 326
Query: 277 ATNLEATCTGL----MDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPLNHH-RCVI 328
ATN+ A + D++G K V++ GG K G E F+ L +P+ + R VI
Sbjct: 327 ATNVGAALAAIEGLGADIEG-KIVLIAGGDGK---GAE---FKDLRDPVAANCRAVI 376
>gi|383501778|ref|YP_005415137.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Rickettsia
australis str. Cutlack]
gi|378932789|gb|AFC71294.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Rickettsia
australis str. Cutlack]
Length = 492
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 133/289 (46%), Gaps = 68/289 (23%)
Query: 41 RSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQ 100
+++ +A+TGTNGKST + +LN G++ V GN+G P +A +SK +
Sbjct: 102 KNLNFIAITGTNGKSTTTALISHILNISGLDYQVAGNIGVPALQA-------KASKNGY- 153
Query: 101 VAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGL 160
V+E+SS+Q+++ K F ++V+LN+TPDHL+RH+ M Y K +F M +
Sbjct: 154 --VLELSSFQLDLV-KIFTAKIAVLLNITPDHLDRHQDMNGYIAAKSKIFDRMDKDSYAV 210
Query: 161 LPFGNQHLNE---------AIKGHRFNLAWI--------------GAFPGVKIDTEAKTA 197
+ N + E IK F++ I F ++ + + +
Sbjct: 211 INIDNDYCREIFITLQQEQRIKLIPFSVTKILENGMSVVDDKINDNFFDNIRFECQYNSE 270
Query: 198 SFE------VPAVGVVSQLQLH-------------------NMKVMGRHNYHN--AAVAA 230
SF PA + +++ H N + G HNY N A+ A
Sbjct: 271 SFRQDEFQGKPAERI--KIREHRRDLQNSLVSSFLNYTIPFNKNLQGTHNYENIAASYAV 328
Query: 231 LSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATN 279
++GL+ +E++ S ++ PHRMQ + I +++ +DSKATN
Sbjct: 329 AKIIGLEPKKILESIGS----FQSLPHRMQYIGS-INNISFYNDSKATN 372
>gi|15616836|ref|NP_240048.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Buchnera
aphidicola str. APS (Acyrthosiphon pisum)]
gi|11133470|sp|P57313.1|MURD_BUCAI RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|25293622|pir||F84955 UDP-N-acetylmuramoylalanine-D-glutamate ligase (EC 6.3.2.9)
[imported] - Buchnera sp. (strain APS)
gi|10038899|dbj|BAB12934.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Buchnera aphidicola
str. APS (Acyrthosiphon pisum)]
Length = 440
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 156/295 (52%), Gaps = 42/295 (14%)
Query: 25 GKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSE 84
G ++S+++ ++ + + I+++TGTNGKSTV T + ++ G +AF+GGN+G P+ E
Sbjct: 90 GIEIISDIELFSREV--TCPIISITGTNGKSTVATMIEKIAKKSGYKAFLGGNIGVPVLE 147
Query: 85 AAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPT-VSVVLNLTPDHLERHKT-MKNY 142
+ + ++E+SS+Q+E N + + ++V+LN++ DH+ R+ + Y
Sbjct: 148 IL---------DKEADLYIIELSSFQLE--NTFNLKSKIAVILNISEDHINRYPNGFQQY 196
Query: 143 ALTKCHLFSH----MVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTAS 198
TK +++ ++N+ N + +++ H N WI +F + D + S
Sbjct: 197 KNTKLSVYNQAEICIINS--------NDKIEKSLI-HSKNKKWI-SFGTNRSDYRICSKS 246
Query: 199 FEVPAVGVVSQLQLHNMKVM--GRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRT-- 254
+ P + ++ L+ +++ G HNY+N V+ L + + N I +L++
Sbjct: 247 ND-PILFFKNKKILNTSEILLYGYHNYNNILVS----LAISDAMQFPR-NDAINVLKSFS 300
Query: 255 -PPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCV-ILLGGQAKVLN 307
PHR QI+ + +GV W++DSK+TN+ +T L +K + +LLGG +K N
Sbjct: 301 NLPHRFQIIKNE-KGVRWINDSKSTNVNSTQVALNSIKTTGTIRLLLGGDSKSAN 354
>gi|427384544|ref|ZP_18881049.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides
oleiciplenus YIT 12058]
gi|425727805|gb|EKU90664.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides
oleiciplenus YIT 12058]
Length = 444
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 146/305 (47%), Gaps = 30/305 (9%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
L + G V+SE++FA + K++ +TG+NGK+T + + + G+ + GN+GN
Sbjct: 82 LKEQGTPVISEIEFAGRYT--HAKMICITGSNGKTTTTSLIYHIFKSAGLNVGLAGNIGN 139
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDHLERHK-T 138
L AL + + V+E+SS+Q++ N Y F ++V++N+TPDHL+R+
Sbjct: 140 SL--------ALQVATEQHDYYVIELSSFQLD--NMYNFRANIAVLMNITPDHLDRYDHC 189
Query: 139 MKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKID-----TE 193
M+ Y K + + + + + + H A + F VK D E
Sbjct: 190 MQKYVDAKFRITQNQTPEDAFIFWNDDPIIKRELDKHGLR-AHLYPFSAVKEDGAIAYVE 248
Query: 194 AKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILR 253
P + ++ + + G HN +N+ A +S L G++ E + + +
Sbjct: 249 DGEVEINEP---IAFNMEQEKLALQGTHNLYNSLAAGISA-NL-AGIEKEYIRRALSDFK 303
Query: 254 TPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNG 313
HR++ V ++GV +++DSKATN+ + L +K K V++LGG+ K G +
Sbjct: 304 GVEHRLEKVAT-VRGVEFINDSKATNVNSCWYALQSMKT-KTVLILGGKDK---GNDYTE 358
Query: 314 FEKLI 318
E L+
Sbjct: 359 IEDLV 363
>gi|399002527|ref|ZP_10705213.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Pseudomonas sp.
GM18]
gi|398124967|gb|EJM14463.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Pseudomonas sp.
GM18]
Length = 448
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 93/298 (31%), Positives = 142/298 (47%), Gaps = 46/298 (15%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+A+TG+N KSTV T VG+M G VGGNLG P AL ++ V+
Sbjct: 111 IVAITGSNAKSTVTTLVGEMAAAAGKRVAVGGNLGTP---------ALDLLSDDVELYVM 161
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFG 164
E+SS+Q+E ++ V+ VLN++ DH++R+ + Y L K +F +
Sbjct: 162 ELSSFQLETTDQ-LNAEVATVLNVSEDHMDRYSGLPAYHLAKHRIFRGARQFVV------ 214
Query: 165 NQH--LNEAIKGH-------RFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNM 215
N+H L+ + G N AF G++ + K +FE + + + +
Sbjct: 215 NRHDALSRPLMGEGQPCWTFGLNKPDFKAF-GIREEDGEKYLAFEFQNL-----MPVREL 268
Query: 216 KVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDS 275
KV G HN NA A G +G+ +A+ S + HR Q V RD+ GV + +DS
Sbjct: 269 KVRGAHNQSNALAALAL--GHAVGLPFDAMLSALRTFAGLEHRCQWV-RDLDGVGYYNDS 325
Query: 276 KATNLEATCTGL----MDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPLNHH-RCVI 328
KATN+ A + D+ G K V++ GG K G E F+ L +P+ + R VI
Sbjct: 326 KATNVGAALAAIEGLGADIDG-KLVLIAGGDGK---GAE---FKDLRDPVAANCRAVI 376
>gi|157963624|ref|YP_001503658.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Shewanella
pealeana ATCC 700345]
gi|157848624|gb|ABV89123.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Shewanella
pealeana ATCC 700345]
Length = 439
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 148/308 (48%), Gaps = 40/308 (12%)
Query: 25 GKRVMSELD-FAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLS 83
G V+ +++ FA V S K++ +TG+NGK+TV T VG+M G VGGN+G P
Sbjct: 90 GIEVIGDVELFARAVAQTSAKVIGITGSNGKTTVTTLVGEMAKASGSSYAVGGNIGVPAL 149
Query: 84 EAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYA 143
+ +PK + V+E+SS+Q+E C + LN++ DH++R+ +++Y
Sbjct: 150 DLLL--------EPK-DLYVLELSSFQLETTYSLQC-VAATCLNISEDHMDRYSDLESYR 199
Query: 144 LTKCHLFSH---MVNTKLGLLPFGNQHLNEAIKGHRFNL-AWIGAFPGVKIDTEAKTASF 199
K L+ V + L N N+ F L A G GV + +S
Sbjct: 200 QAKLKLYEQSKMAVFNREDTLTLPNNPTNQ----QSFGLDAPEGDDWGVSGGMIVQGSSQ 255
Query: 200 EVPAVGVVSQLQLHNMKVMGRHNYHN--AAVAALSVLGLDIGVDVEALNSTIEILRTPPH 257
+P + ++ ++G HN N AA+A + G+ +E + + + H
Sbjct: 256 IMP---------ISDVALVGSHNLANIIAAMALTTAAGIKRECQIEVAKTFLGL----AH 302
Query: 258 RMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGH--KCVILLGGQAKVLNGQESNGFE 315
R ++V DI GVT+V+DSKATN+ AT + L H + +++ GG K G + E
Sbjct: 303 RCEVVA-DIDGVTYVNDSKATNIGATVAAIDGLSEHLGELILIAGGDGK---GADFKPLE 358
Query: 316 KLIEPLNH 323
++E ++
Sbjct: 359 PVLEKVSQ 366
>gi|229524389|ref|ZP_04413794.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
bv. albensis VL426]
gi|229337970|gb|EEO02987.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
bv. albensis VL426]
Length = 467
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 96/324 (29%), Positives = 151/324 (46%), Gaps = 53/324 (16%)
Query: 2 WML-WLFLLEFQLKATGLAC-------LLQSGKRVMSELD-FAAQVIPRSIKILAVTGTN 52
W L WL + + G+A +L +G V+ +++ FA V ++A+TG+N
Sbjct: 88 WNLEWLLNADLVVTNPGIALATPEIQQVLAAGIPVVGDIELFAWHV---DTPVIAITGSN 144
Query: 53 GKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQME 112
GKSTV G + N G++A VGGN+G P AL P ++ V+E+SS+Q+E
Sbjct: 145 GKSTVTDLSGVLANAAGVKAAVGGNIGVP---------ALDLISPDVELYVLELSSFQLE 195
Query: 113 IPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSH----MVNT-KLGLLPFGNQH 167
+ + LNL+ DH++R++ M++Y K +F H +VN P H
Sbjct: 196 TTSSLKL-KAAAFLNLSEDHMDRYQGMEDYRQAKLRIFDHAETAVVNADDTQTFPDHAAH 254
Query: 168 LNEAIKG----HRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNY 223
L G +F+LA + EA A E + ++GRHN
Sbjct: 255 LQVVTFGVEQAAQFSLAQHQGREYLFARDEAVMACAE--------------LSLVGRHNV 300
Query: 224 HN--AAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLE 281
N +A L ++ + ++AL S + HR Q+V D G+ WV+DSKATN+
Sbjct: 301 ANVLTVLALLDSAEVNFRLALDALKSYTGL----THRCQVV-ADNHGIKWVNDSKATNVA 355
Query: 282 ATCTGLMDLKGH-KCVILLGGQAK 304
+T L LK + +L+GG K
Sbjct: 356 STLAALSGLKIEGQLYLLVGGVGK 379
>gi|254468605|ref|ZP_05082011.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [beta
proteobacterium KB13]
gi|207087415|gb|EDZ64698.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [beta
proteobacterium KB13]
Length = 444
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 139/293 (47%), Gaps = 35/293 (11%)
Query: 34 FAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALP 93
F Q+ + K++ +TGTNGK+T + + +L+ +++ GN+G P+ + +
Sbjct: 98 FLNQIDRKKTKLIGITGTNGKTTFCSLLASILSFNDLKSIAVGNIGIPI-------LNIL 150
Query: 94 SSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSH- 152
+++ KF VVE+SSYQ+E+ +K V+LN+ PDHL+R+ + +Y K L +H
Sbjct: 151 TTQNKFDYIVVELSSYQIEVLDKMTVFDYGVILNIEPDHLDRYDSFIDYKNAKLKLANHS 210
Query: 153 --MVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKID---TEAKTASFEVPAVGVV 207
+++ K + N H N AFP D E KT F +
Sbjct: 211 KTILHDKESAVV--NDHAN--------------AFPIDPKDFHIEEIKTDFFTFKKQNKI 254
Query: 208 SQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQ 267
++ +K G HN N + ++ + E + + + PHR + + D
Sbjct: 255 YRIDTPYLK--GVHNVKNIMYLLKLLEIMNCNISFEKVRNFFRNQKGIPHRFEYLSID-N 311
Query: 268 GVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKV--LNGQESNGFEKLI 318
+++DSKATNL +T + L L G K +L GG K L+G E+ EKLI
Sbjct: 312 NYIFINDSKATNLASTKSALNSLNG-KIHLLFGGDLKNQPLDGIENFFNEKLI 363
>gi|294783653|ref|ZP_06748977.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Fusobacterium
sp. 1_1_41FAA]
gi|294480531|gb|EFG28308.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Fusobacterium
sp. 1_1_41FAA]
Length = 432
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 148/315 (46%), Gaps = 47/315 (14%)
Query: 9 LEFQLKATGLAC------LLQSGKRVMSELDFAAQVIPRS---IKILAVTGTNGKSTVVT 59
+EF +K+ G+ + + G +V+ E++ A + KI+A+TGTNGKST
Sbjct: 48 IEFFIKSPGIPYNDFVKEVQKRGIKVLDEIEVAYNYMVEKNLKTKIIAITGTNGKSTTTA 107
Query: 60 FVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQME-IPNKYF 118
+ +LNH G +A GN+G LSEA H + +E+SS+Q+E + N F
Sbjct: 108 KISDLLNHAGYKACYAGNIGRSLSEALLH-------EKDLDFVSLELSSFQLENVEN--F 158
Query: 119 CPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFGNQHLN---EAIKGH 175
P +S+++N+ PDH+ER+ + Y TK ++ + + + + + + IK
Sbjct: 159 RPYISMIINMGPDHIERYNSFDEYYDTKFNIAKNQDENQYFIENIDDVEIEKRAKQIKAK 218
Query: 176 RFNLAWIGAFPGVKIDTEAKTASFEVPA----VGVVSQLQLHNMKVMGRHNYHNA--AVA 229
R ++ +++K A+ V VG ++ + + G HN N VA
Sbjct: 219 RISV------------SKSKEANVYVEDNKIYVGKDFIIEADKLSLKGIHNLENTLFMVA 266
Query: 230 ALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMD 289
+L +D E L + + HR ++ + V +++DSKATN+++T +
Sbjct: 267 TAEIL----NIDREKLKEFLMVATPLEHRTELFF-NYGDVKFINDSKATNVDSTKFAIQA 321
Query: 290 LKGHKCVILLGGQAK 304
K +++ GG K
Sbjct: 322 NKD--SILICGGYDK 334
>gi|404495267|ref|YP_006719373.1| UDP-N-acetylmuramylalanine--D-glutamate ligase [Geobacter
metallireducens GS-15]
gi|418065734|ref|ZP_12703105.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Geobacter
metallireducens RCH3]
gi|122063247|sp|Q39YM1.1|MURD_GEOMG RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|78192886|gb|ABB30653.1| UDP-N-acetylmuramylalanine--D-glutamate ligase [Geobacter
metallireducens GS-15]
gi|373561814|gb|EHP88040.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Geobacter
metallireducens RCH3]
Length = 452
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 150/295 (50%), Gaps = 31/295 (10%)
Query: 18 LACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGN 77
L ++G+ V++E++ A++ + ++ ++A+TGTNGK+T T G++ + G FVGGN
Sbjct: 85 LQAARRAGREVITEIELASRFV--TVPMVAITGTNGKTTTTTLTGEIFSACGFRTFVGGN 142
Query: 78 LGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK 137
+GNPL I L + VVE+SS+Q+E + F P V+V+LN+T DHL+R+
Sbjct: 143 IGNPL-------IELVEGGETVERVVVEISSFQLEWISS-FRPRVAVLLNITEDHLDRYA 194
Query: 138 TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTA 197
T + Y K +F + +T +L ++++ I FP + E
Sbjct: 195 TFQEYIDAKVRIFENQESTDYAVL-----NVDDPIVAGIAGRVAATVFP-MSQQRELAEG 248
Query: 198 SFEVPAV------GVVSQLQLHNMKVMGRHNYHN--AAVAALSVLGLDIGVDVEALNSTI 249
F V G + ++ G HN N A++AA +LG D +AL + +
Sbjct: 249 VFHRDGVITFRHQGREERFPTARFRITGVHNIENIMASLAATLLLGCDAK---QAL-AAV 304
Query: 250 EILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
E PHRM++V R++ GV + +DSKATN+ + L + ++ GG+ K
Sbjct: 305 EGFGGLPHRMELV-RELAGVRYYEDSKATNVGSVEKALASF--NDITLIAGGKDK 356
>gi|429331489|ref|ZP_19212243.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Pseudomonas
putida CSV86]
gi|428763821|gb|EKX85982.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Pseudomonas
putida CSV86]
Length = 448
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 140/296 (47%), Gaps = 42/296 (14%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+A++G+N KSTV T VG+M G VGGNLG P AL ++ V+
Sbjct: 111 IVAISGSNAKSTVTTLVGEMAAAAGKRVAVGGNLGTP---------ALDLLGDDVELYVL 161
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSH----MVNTKLGL 160
E+SS+Q+E ++ V+ VLN++ DH++R+ + Y L K +F +VN + L
Sbjct: 162 ELSSFQLETTDQ-LNAEVATVLNVSEDHMDRYSGLPAYHLAKHRIFRGARQVVVNRQDAL 220
Query: 161 ---LPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKV 217
LP Q N AF G++ + K +FE + + + +K+
Sbjct: 221 SRPLPVEGQ----PCWTFGLNTPDFKAF-GLREENGEKYLAFEFRNL-----MPVRELKI 270
Query: 218 MGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKA 277
G HN NA A LG +G+ EA+ ++ HR Q V R++ GV + DDSKA
Sbjct: 271 RGAHNQSNALAA--LALGHAVGLPFEAMLESLRSFAGLAHRCQWV-RELNGVNYYDDSKA 327
Query: 278 TNLEATCTGL----MDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPLNHH-RCVI 328
TN+ A + D+ G K V++ GG K + F L P+ H R V+
Sbjct: 328 TNVGAALAAIEGLGADIDG-KLVLIAGGDGKGAD------FSALRAPVGEHCRAVV 376
>gi|420149877|ref|ZP_14657045.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Capnocytophaga
sp. oral taxon 335 str. F0486]
gi|394753074|gb|EJF36679.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Capnocytophaga
sp. oral taxon 335 str. F0486]
Length = 444
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 151/316 (47%), Gaps = 33/316 (10%)
Query: 23 QSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPL 82
+ G V+SE++FA+Q I + +TG+NGK+T + G++ +GGN+G
Sbjct: 84 EKGIAVISEIEFASQYTDSLI--VGITGSNGKTTTTLLTYHIFKEAGLQVGLGGNIGYSF 141
Query: 83 SEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK-TMKN 141
+E + + P + V+E+SS+Q++ ++F P ++V+LN+TPDHL+R+ +N
Sbjct: 142 AE------LVATENPLYY--VLEISSFQLD-GIEHFAPHIAVLLNITPDHLDRYDYKFEN 192
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASF-- 199
Y +K + + + ++ + + + H I I+ E +F
Sbjct: 193 YINSKFRIAMNQTENDYLIYDADDEVITQWLSTHTIKSKLI----PFSIEKELPQGAFLK 248
Query: 200 ----EVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTP 255
+ +++ + + + G+HN N A SV + + +L +++ +
Sbjct: 249 DNKIYIMLENQTTEIDVEEISLRGKHNIKNTMAA--SVAARLVNIRNNSLRESLKGFKGA 306
Query: 256 PHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFE 315
PHR++ V + + GVT+V+DSKATN+ + L +K V ++GGQ K N +
Sbjct: 307 PHRLEEV-KVVDGVTYVNDSKATNVNSVFYALDTIK-TPIVWIVGGQDK------GNDYN 358
Query: 316 KLIEPLNHHRCVITEC 331
L+ P H + C
Sbjct: 359 SLL-PYVHEKVRAIVC 373
>gi|254419559|ref|ZP_05033283.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Brevundimonas sp.
BAL3]
gi|196185736|gb|EDX80712.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Brevundimonas sp.
BAL3]
Length = 467
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 130/272 (47%), Gaps = 25/272 (9%)
Query: 41 RSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQ 100
R ++A+TGTNGKST +G +L G+ VGGN+G +ALP P
Sbjct: 114 RRPWVIAITGTNGKSTTTALIGWVLQQAGLTVHVGGNIG-------IGVLALPEPTPG-A 165
Query: 101 VAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLF-SHMVNTKLG 159
V V+EVSSYQ+++ F P +++ N++PDHL+RH M+ Y K +F S +G
Sbjct: 166 VYVIEVSSYQLDL-TTGFAPDAAILTNISPDHLDRHGGMEGYVAAKRRIFQSRKTAPYVG 224
Query: 160 L-LPFGNQHLNE-AIKGHRFNLAWIGAFP-----GVKIDTEAKTASFEVPAVGVVSQLQL 212
+ P+G E +G + + P G+ + + T + +V +
Sbjct: 225 IDDPYGFAIWQELKAEGRAVDPVSV-ERPMDDDLGMYLMDDWLTYNAGGRPAPIVDLSKA 283
Query: 213 HNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWV 272
++ GRHN NAA A L+V D+G+ E + + HRM+ V I V ++
Sbjct: 284 RSLP--GRHNAQNAAFAFLAV--NDMGIPEETVVKGLLTFPGLAHRMEAVGH-IGHVRFI 338
Query: 273 DDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
+DSKATN +A L K + GG+ K
Sbjct: 339 NDSKATNADAARQALASYP--KVFWIAGGKPK 368
>gi|443475155|ref|ZP_21065114.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Pseudanabaena
biceps PCC 7429]
gi|443020078|gb|ELS34081.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Pseudanabaena
biceps PCC 7429]
Length = 463
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 137/287 (47%), Gaps = 25/287 (8%)
Query: 25 GKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSE 84
G + E++ A + + + I + +TGTNGK+TV + + G++A GN+G P E
Sbjct: 93 GLDTIGEIELAWRYL-KHIPWVGITGTNGKTTVTSLTAAIFQAAGLKAIACGNIGFPACE 151
Query: 85 AAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYAL 144
A + KP + +A E+SSYQ+E + P + + TPDHL RH T++ Y
Sbjct: 152 IALQVLQ-NQLKPDWIIA--ELSSYQIE-STQTVLPEIGIWTTFTPDHLNRHYTLEAYRN 207
Query: 145 TKCHLF---SHMV--NTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASF 199
K L +H+V L FG +A+ N G+ I+ F
Sbjct: 208 IKASLIDRSAHIVLNGNDPNLCKFGAAMWPKALWTGVDNQVVEAHTDGICIND--GWVKF 265
Query: 200 EVPAVGVVSQLQLHNMKVMGRHNYHN--AAVAALSVLGLDIGVDVEALNSTIEILRTPPH 257
A+ +S QL +G+HN N +VAA + G+ E ++ I + PH
Sbjct: 266 RGEAIFPISHWQL-----LGKHNRQNLLMSVAAAKL----AGISSEHIDFAISQFKGVPH 316
Query: 258 RMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
R++ + R +G+ +++DSKATN +A GL +K V++ GGQ K
Sbjct: 317 RLEHI-RLYEGIAFINDSKATNYDAAEVGLKAVK-PPVVLIAGGQPK 361
>gi|417938397|ref|ZP_12581695.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
infantis SK970]
gi|343391487|gb|EGV04062.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
infantis SK970]
Length = 450
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 144/300 (48%), Gaps = 29/300 (9%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L+ G V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LEKGIPVLTEVELAYLI--SEAPIIGITGSNGKTTTTTMIGEVLTATGQNGLLSGNIGYP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A + V+E+SS+Q+ + + F P ++V+ NL P H++ H + +
Sbjct: 151 ASQVA-------QTATDKDTLVMELSSFQL-MGIQEFHPEIAVITNLMPTHIDYHGSFEA 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDT---EAKTAS 198
Y K ++ S+M +L F NQ L + + + N + K+D E
Sbjct: 203 YVAAKWNIQSNMTAVDYLVLNF-NQELAKEL-ATKTNATVVPFSTLEKVDGAYLEDGLLY 260
Query: 199 FEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHR 258
F V + + V G HN N A+A ++V L GV+ E + T+ HR
Sbjct: 261 FRGEKV-----MAADEIGVPGSHNVEN-ALATIAVAKLR-GVENETIKETLSAFGGVKHR 313
Query: 259 MQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
+Q V + I GV + +DSK+TN+ AT L K +++ GG + N F++L+
Sbjct: 314 LQFVDQ-INGVKFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------GNEFDELV 366
>gi|17986860|ref|NP_539494.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Brucella
melitensis bv. 1 str. 16M]
gi|260565338|ref|ZP_05835822.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Brucella melitensis
bv. 1 str. 16M]
gi|265991490|ref|ZP_06104047.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Brucella melitensis
bv. 1 str. Rev.1]
gi|30316086|sp|Q8YI68.1|MURD_BRUME RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|17982497|gb|AAL51758.1| udp-n-acetylmuramoylalanine--d-glutamate ligase [Brucella
melitensis bv. 1 str. 16M]
gi|260151406|gb|EEW86500.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Brucella melitensis
bv. 1 str. 16M]
gi|263002274|gb|EEZ14849.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Brucella melitensis
bv. 1 str. Rev.1]
Length = 467
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 121/244 (49%), Gaps = 14/244 (5%)
Query: 46 LAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVE 105
+A+TGTNGKST + ++ G + +GGN+G A + LP + + VVE
Sbjct: 117 IAITGTNGKSTTTALIAHIIKATGRDMQLGGNIGT-----AILTLELPCAD---RFYVVE 168
Query: 106 VSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFGN 165
SSYQ+++ PT ++LNLTPDHL+RH +M+NYA K L + +G+
Sbjct: 169 CSSYQIDLAPS-LNPTAGILLNLTPDHLDRHGSMENYAAIKERLVAASGTAIIGIDDAYC 227
Query: 166 QHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQL-QLHNM-KVMGRHNY 223
Q + + + G + I + A A G + ++ L + + G HN
Sbjct: 228 QAIADRLHGAGIRVVRISKEKHLDRGYFADGAKLLWAQDGEIDEIASLEGIGSLRGAHNA 287
Query: 224 HNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEAT 283
NA A ++ L G+ +E +++ ++ HRM+ V R + V +V+DSKATN EAT
Sbjct: 288 QNALAAIVAC--LSAGLSLEEIHAGLKSFPGLAHRMEQVGRRGK-VLFVNDSKATNAEAT 344
Query: 284 CTGL 287
L
Sbjct: 345 APAL 348
>gi|90413038|ref|ZP_01221036.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
[Photobacterium profundum 3TCK]
gi|90326053|gb|EAS42492.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
[Photobacterium profundum 3TCK]
Length = 447
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 149/316 (47%), Gaps = 42/316 (13%)
Query: 3 MLWLFLLEFQLKATGLA-------CLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKS 55
M WL + + + G+A +G ++ +++ A+ + + + +A+TG+NGKS
Sbjct: 63 MNWLLEADLIVASPGIALATPELVAAKAAGIEIVGDIELFARAVTKPV--VAITGSNGKS 120
Query: 56 TVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPN 115
TV + +G+M I VGGN+G AL + + V+E+SS+Q+E +
Sbjct: 121 TVTSLIGEMAKEASINVGVGGNIG---------FAALDMLANEHDLYVLELSSFQLETTS 171
Query: 116 KYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMV-----NTKLGLLPFGNQHLNE 170
+V LNL+ DH++R+ +++Y+L K +F H L LP H
Sbjct: 172 SLELKA-AVYLNLSEDHMDRYDGIEDYSLAKMRIFEHAELAVYNRDDLATLPTSFSH--- 227
Query: 171 AIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAA 230
I F+ G V +D E E AV ++ +++ ++GRHN N+ A
Sbjct: 228 KITSFGFDNQDYGL---VTLDGE------EFLAVDKQPIMKTNDIALVGRHNVANSLAAL 278
Query: 231 LSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGL--M 288
++I D +A ++ HR Q+V V WV+DSKATNL +T L +
Sbjct: 279 ALADAVNI--DHQAACRALQRYNGLAHRCQLVVNQ-HDVKWVNDSKATNLASTLAALKGL 335
Query: 289 DLKGHKCVILLGGQAK 304
+L G K +L+GG K
Sbjct: 336 NLPG-KLHLLVGGDGK 350
>gi|221231502|ref|YP_002510654.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae ATCC 700669]
gi|415697588|ref|ZP_11456818.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae 459-5]
gi|415749105|ref|ZP_11477049.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae SV35]
gi|415751786|ref|ZP_11478897.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae SV36]
gi|418122962|ref|ZP_12759897.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA44378]
gi|418127548|ref|ZP_12764444.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae NP170]
gi|418136719|ref|ZP_12773562.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA11663]
gi|418177719|ref|ZP_12814303.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA41565]
gi|419472744|ref|ZP_14012597.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA13430]
gi|254766058|sp|B8ZMZ6.1|MURD_STRPJ RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|220673962|emb|CAR68471.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae ATCC 700669]
gi|353798435|gb|EHD78765.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA44378]
gi|353800009|gb|EHD80323.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae NP170]
gi|353844493|gb|EHE24536.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA41565]
gi|353902647|gb|EHE78175.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA11663]
gi|379553646|gb|EHZ18730.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA13430]
gi|381309482|gb|EIC50315.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae SV36]
gi|381317399|gb|EIC58124.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae SV35]
gi|381319186|gb|EIC59902.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae 459-5]
Length = 450
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 145/297 (48%), Gaps = 23/297 (7%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L G V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LAKGIPVLTEVELAYLI--SEAPIIGITGSNGKTTTTTMIGEVLTAAGQHGLLSGNIGYP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A + S K V+E+SS+Q+ + + F P ++V+ NL P H++ H +
Sbjct: 151 ASQVA----QIASDKDTL---VMELSSFQL-MGVQEFHPEIAVITNLMPTHIDYHGSFSE 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEV 201
Y K ++ + M +L F NQ L + + A + F ++ A ++
Sbjct: 203 YVAAKWNIQNKMTAADFLVLNF-NQDLAKDLTSK--TEATVVPFSTLEKVDGAYLEDGQL 259
Query: 202 PAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQI 261
G V + + + V G HN N A+A ++V L VD + + T+ HR+Q
Sbjct: 260 YFRGEVV-MAANEIGVPGSHNVEN-ALATIAVAKLR-DVDNQTIKETLSAFGGVKHRLQF 316
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
V DI+GV + +DSK+TN+ AT L K V++ GG + N F++L+
Sbjct: 317 VD-DIKGVKFYNDSKSTNILATQKALSGFDNSKVVLIAGGLDR------GNEFDELV 366
>gi|313885109|ref|ZP_07818861.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Eremococcus
coleocola ACS-139-V-Col8]
gi|312619800|gb|EFR31237.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Eremococcus
coleocola ACS-139-V-Col8]
Length = 457
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 141/290 (48%), Gaps = 42/290 (14%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
++A+TG+NGK+T + ++ LG +A + GN+G P+ + + + V+
Sbjct: 114 MIAITGSNGKTTTTALINEI---LGEKAILAGNIGIPI----LSVVGETQADKRL---VM 163
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFG 164
E+SS+Q++ +F P + V+ N+ P HL+ H +M+ Y K + +++ + +
Sbjct: 164 EISSFQLQ-GTSFFKPKIGVITNIYPTHLDYHGSMEAYIAAKLKIAANLDEQDFLVYNYD 222
Query: 165 NQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQ-----------LQLH 213
+ L EA K + +K+ + E+ A G+ Q L L
Sbjct: 223 QEILQEAAKSIK----------AIKLPFSRTQVTPELVAEGLYLQDGQVIYHNQPILSLD 272
Query: 214 NMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVD 273
++K+ G HN N +AAL+V ++ VD+ + +TIE + PHR++ V +G + +
Sbjct: 273 SIKIPGDHNIEN-VLAALAVAVIE-KVDLPQVKATIEAYKGMPHRIEHVAS-FKGREFYN 329
Query: 274 DSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPLNH 323
DSKATN+ AT T L ++ +I +GG N F+ LI L H
Sbjct: 330 DSKATNMTATITALASF--NQDLIYIGG-----GLDRGNEFDDLIPHLGH 372
>gi|148989060|ref|ZP_01820460.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
pneumoniae SP6-BS73]
gi|147925557|gb|EDK76634.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
pneumoniae SP6-BS73]
Length = 434
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 145/297 (48%), Gaps = 23/297 (7%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L G V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 77 LAKGIPVLTEVELAYLI--SEAPIIGITGSNGKTTTTTMIGEVLTAAGQHGLLSGNIGYP 134
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A + S K V+E+SS+Q+ + + F P ++V+ NL P H++ H +
Sbjct: 135 ASQVA----QIASDKDTL---VMELSSFQL-MGVQEFHPEIAVITNLMPTHIDYHGSFSE 186
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEV 201
Y K ++ + M +L F NQ L + + A + F ++ A ++
Sbjct: 187 YVAAKWNIQNKMTAADFLVLNF-NQDLAKDLTSK--TEATVVPFSTLEKVDGAYLEDGQL 243
Query: 202 PAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQI 261
G V + + + V G HN N A+A ++V L VD + + T+ HR+Q
Sbjct: 244 YFRGEVV-MAANEIGVPGSHNVEN-ALATIAVAKLR-DVDNQTIKETLSAFGGVKHRLQF 300
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
V DI+GV + +DSK+TN+ AT L K V++ GG + N F++L+
Sbjct: 301 VD-DIKGVKFYNDSKSTNILATQKALSGFDNSKVVLIAGGLDR------GNEFDELV 350
>gi|421289324|ref|ZP_15740076.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA54354]
gi|421304644|ref|ZP_15755300.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA62331]
gi|395890584|gb|EJH01590.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA54354]
gi|395905306|gb|EJH16211.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA62331]
Length = 450
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 145/297 (48%), Gaps = 23/297 (7%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L G V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LAKGIPVLTEVELAYLI--SEAPIIGITGSNGKTTTTTMIGEVLTAAGQHGLLSGNIGYP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A + S K V+E+SS+Q+ + + F P ++V+ NL P H++ H +
Sbjct: 151 ASQVA----QIASDKDTL---VMELSSFQL-MGVQEFHPEIAVITNLMPTHIDYHGSFSE 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEV 201
Y K ++ + M +L F NQ L + + A + F ++ A ++
Sbjct: 203 YVAAKWNIQNKMTAADFLVLNF-NQDLAKDLTSK--TEATVIPFSTLEKVDGAYLEDGQL 259
Query: 202 PAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQI 261
G V + + + V G HN N A+A ++V L VD + + T+ HR+Q
Sbjct: 260 YFRGEVV-MAANEIGVPGSHNVEN-ALATIAVAKLR-DVDNQTIKETLSAFGGVKHRLQF 316
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
V DI+GV + +DSK+TN+ AT L K V++ GG + N F++L+
Sbjct: 317 VD-DIKGVKFYNDSKSTNILATQKALSGFDNSKVVLIAGGLDR------GNEFDELV 366
>gi|153835403|ref|ZP_01988070.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio harveyi
HY01]
gi|148868059|gb|EDL67234.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio harveyi
HY01]
Length = 437
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 150/328 (45%), Gaps = 63/328 (19%)
Query: 18 LACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGN 77
+ +L G V+ +++ A + + + +A+TG+NGKSTV G M G+ VGGN
Sbjct: 85 IQAVLAKGTPVVGDIELFAWAVDKPV--IAITGSNGKSTVTDLTGVMAKAAGLTVGVGGN 142
Query: 78 LGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK 137
+G P AL + + V+E+SS+Q+E + + LNL+ DH++R++
Sbjct: 143 IGVP---------ALDLLEQGADLYVLELSSFQLETTSSLKLK-AAAFLNLSEDHMDRYE 192
Query: 138 TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTA 197
M +Y K +F N +L ++ +Q FP DTE
Sbjct: 193 GMSDYRQAKLRIFD---NAELAVVNRDDQE----------------TFP----DTETPLV 229
Query: 198 SF--EVPAVGVVSQ-------------LQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDV 242
+F + A G+ + + +K++G+HN N AL VL L DV
Sbjct: 230 TFGSDEQAYGLEADGNRTWLLDHGQRVIASDELKLVGKHNLAN----ALVVLALLKAADV 285
Query: 243 EALNSTIEILRTP---PHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGH-KCVIL 298
+ + ++ L+T HR Q+V D +GV WV+DSKATN+ +T L L+ K +L
Sbjct: 286 D-YHKSLNALKTYTGLTHRCQVV-ADNRGVKWVNDSKATNIASTMAALSGLESTGKLYLL 343
Query: 299 LGGQAKVLNGQESNGFEKLIEPLNHHRC 326
+GG K G + + + LN C
Sbjct: 344 VGGVGK---GADFTPLKPIFATLNLQLC 368
>gi|350570241|ref|ZP_08938609.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Neisseria
wadsworthii 9715]
gi|349797290|gb|EGZ51057.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Neisseria
wadsworthii 9715]
Length = 445
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 140/289 (48%), Gaps = 30/289 (10%)
Query: 23 QSGKRVMSELDFAA-QVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
QSG V+ +++ A ++ +S KI+A+TG+NGK+TV + VG + G++ V GN+G P
Sbjct: 89 QSGGVVLGDVEILAHELKGKSDKIIAITGSNGKTTVTSLVGYLCEKCGLDTVVAGNIGTP 148
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
+ EA V V+E+SS+Q+E + + +VVLN++ DHL+R+ + +
Sbjct: 149 VLEAYMQ-----RDGKAADVWVLELSSFQLENTD-HLAADAAVVLNISEDHLDRYDDLLD 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLN------EAIKGHRFNLAWIGAFPGVKIDTEAK 195
YA K +F G Q LN A+K ++ W + G + D A
Sbjct: 203 YAHAKDKIFRGN----------GVQVLNADDVMCRAMKRPNRDIKWF-SLEG-QADYWAD 250
Query: 196 TASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTP 255
+ + A G L + + G HN N A +G+ L I+ +
Sbjct: 251 VQAGRLKA-GADDLLDTAAIPLQGLHNAANVLAALALCEA--VGLPRTELLQHIQTFKGL 307
Query: 256 PHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
PHR++ V G+T++DDSK TN+ AT + L+ V++ GGQ K
Sbjct: 308 PHRVEKVGEK-NGITFIDDSKGTNVGATAAAIAGLQ-SPLVLIAGGQGK 354
>gi|398852596|ref|ZP_10609248.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Pseudomonas sp.
GM80]
gi|398243685|gb|EJN29267.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Pseudomonas sp.
GM80]
Length = 448
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 143/295 (48%), Gaps = 40/295 (13%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+A++G+N KSTV T VG+M G VGGNLG P AL ++ V+
Sbjct: 111 IVAISGSNAKSTVTTLVGEMAAAAGKRVAVGGNLGTP---------ALDLLSDDVELYVM 161
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLF----SHMVNTKLGL 160
E+SS+Q+E ++ V+ VLN++ DH++R+ + Y L K +F +VN + L
Sbjct: 162 ELSSFQLETTDQ-LNAEVATVLNISEDHMDRYSGLPAYHLAKHRIFRGARQFVVNRQDAL 220
Query: 161 LPFGNQHLNEAIKGHRFNLAW--IGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVM 218
+ E F L+ AF G++ + K +FE + + + +K+
Sbjct: 221 T---RPLMGEGQPCWTFGLSKPDFKAF-GIREEDGEKYLAFEFQNL-----MPVRELKIR 271
Query: 219 GRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKAT 278
G HN NA A LG +G+ +A+ S + HR Q V RD+ GV + +DSKAT
Sbjct: 272 GAHNQSNALAA--LALGHAVGLPFDAMLSALRTFAGLEHRCQWV-RDLDGVAYYNDSKAT 328
Query: 279 NLEATCTGL----MDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPLNHH-RCVI 328
N+ A + D+ G K +++ GG K G E F L +P+ + R VI
Sbjct: 329 NVGAALAAIEGLGADIDG-KVILIAGGDGK---GAE---FNDLRDPVAANCRAVI 376
>gi|89095261|ref|ZP_01168182.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Neptuniibacter
caesariensis]
gi|89080468|gb|EAR59719.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Oceanospirillum
sp. MED92]
Length = 449
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 93/301 (30%), Positives = 144/301 (47%), Gaps = 43/301 (14%)
Query: 42 SIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQV 101
S ++A+TG+N KSTV T VG+M GI V GN+G P+ E +P+ +
Sbjct: 108 SAPVIAITGSNAKSTVTTLVGEMAEAAGINVGVCGNIGTPVLEML--------EQPEKDL 159
Query: 102 AVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLG-- 159
V+E+SS+Q+E N V+ VLN++PDH++R+ +M++Y K +F N +
Sbjct: 160 YVIELSSFQLETTNDLRA-EVATVLNISPDHMDRYDSMQDYYKAKHRIFRGAKNVVVNRD 218
Query: 160 ------LLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLH 213
LLP G +K F+L P +K+ + A+G+ +
Sbjct: 219 DSLTAPLLPQG-------VKQTAFHLGK----PDLKLFGLIEDQGDVWLALGLDKLIAAS 267
Query: 214 NMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVD 273
+K+ GRHN NA A + +D A+ + + HR + V QGVT+ +
Sbjct: 268 ELKMRGRHNLANALAALALGQAAGLPMD--AMLNALRGFTGLRHRCEWVAEH-QGVTYFN 324
Query: 274 DSKATNLEATCTGLMDLKG-----HKCVILLGGQAKVLNGQESNGFEKLIEPL-NHHRCV 327
DSK TN+ AT L L G + V++ GG K G E F +L EPL N+ R +
Sbjct: 325 DSKGTNVGATVAALNGLGGTLSEENGIVLIAGGDGK---GAE---FVELAEPLRNYGRAL 378
Query: 328 I 328
+
Sbjct: 379 V 379
>gi|399543812|ref|YP_006557120.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Marinobacter sp.
BSs20148]
gi|399159144|gb|AFP29707.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Marinobacter sp.
BSs20148]
Length = 448
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 145/328 (44%), Gaps = 71/328 (21%)
Query: 27 RVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAA 86
R+ ++D A+ I+A+TG+NGK+TV T V M G VGGN+G P
Sbjct: 95 RIRGDIDLFAEAA--DAPIIAITGSNGKTTVTTLVADMARDAGYLVAVGGNIGTP----- 147
Query: 87 FHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTK 146
AL ++ V+E+SS+Q+E ++ + VLN++ DH++R+ Y K
Sbjct: 148 ----ALDLLNTGARLYVLELSSFQLETTDE-LKALAATVLNISDDHMDRYPDKMAYYQAK 202
Query: 147 CHLF---------------SHMVNTKLGLLPFGNQHLN--------EAIKGHRFNLAWIG 183
+F + M T L + FG +N +++ GH + + W
Sbjct: 203 QRIFRGCQYAIVNLDDALSTPMARTTLRFICFGMNRVNPDTFSTRDDSVSGHPW-VTW-- 259
Query: 184 AFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVE 243
G+ + ++ + ++GRHN N +AAL LG G+ ++
Sbjct: 260 ---------------------GLDNLIRADELGLIGRHNLSN-VMAALG-LGKAAGLPMD 296
Query: 244 ALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDL--KGHKCVILLGG 301
++ +T PHR + + R + GV +++DSK TN+ AT L L K V++ GG
Sbjct: 297 SMLATARAFHGLPHRCESL-RLVNGVEYINDSKGTNVGATVAALDSLAPAAGKIVLIAGG 355
Query: 302 QAKVLNGQESNGFEKLIEPLNHH-RCVI 328
K + F L +P H R V+
Sbjct: 356 DGKGAD------FSPLADPARRHCRAVV 377
>gi|398951321|ref|ZP_10673969.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Pseudomonas sp.
GM33]
gi|398156708|gb|EJM45122.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Pseudomonas sp.
GM33]
Length = 448
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 140/287 (48%), Gaps = 39/287 (13%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+A++G+N KSTV T VG+M G VGGNLG P AL ++ V+
Sbjct: 111 IVAISGSNAKSTVTTLVGEMAAAAGKRVAVGGNLGTP---------ALDLLHDDVELYVM 161
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLF----SHMVNTKLGL 160
E+SS+Q+E ++ V+ VLN++ DH++R+ + Y L K +F +VN + L
Sbjct: 162 ELSSFQLETTDQ-LNAEVATVLNVSEDHMDRYSGLPAYHLAKHRIFRGARQFVVNRQDAL 220
Query: 161 LPFGNQHLNEAIKGHRFNLAW--IGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVM 218
+ E F L+ AF G++ + K +FE + + + +K+
Sbjct: 221 ---SRPLMGEGQPCWTFGLSKPDFKAF-GIREEDGEKYLAFEFQNL-----MPVRELKIR 271
Query: 219 GRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKAT 278
G HN NA A G +G+ +A+ S++ HR Q V RD+ GV + +DSKAT
Sbjct: 272 GAHNQSNALAALAL--GHAVGLPFDAMLSSLRTFAGLEHRCQWV-RDLDGVGYYNDSKAT 328
Query: 279 NLEATCTGL----MDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPL 321
N+ A + D+ G K V++ GG K G E F+ L +P+
Sbjct: 329 NVGAALAAIEGLGADIDG-KVVLIAGGDGK---GAE---FKDLRDPV 368
>gi|169833121|ref|YP_001694158.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
pneumoniae Hungary19A-6]
gi|226722947|sp|B1IAM3.1|MURD_STRPI RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|168995623|gb|ACA36235.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae Hungary19A-6]
Length = 450
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 145/297 (48%), Gaps = 23/297 (7%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L G V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LAKGIPVLTEVELAYLI--SEAPIIGITGSNGKTTTTTMIGEVLTAAGQHGLLSGNIGYP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A + S K V+E+SS+Q+ + + F P ++V+ NL P H++ H +
Sbjct: 151 ASQVA----QIASDKDTL---VMELSSFQL-MGVQEFHPEIAVITNLMPTHIDYHGSFSE 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEV 201
Y K ++ + M +L F NQ L + + A + F ++ A ++
Sbjct: 203 YVAAKWNIQNKMTAADFLVLNF-NQDLAKDLTSK--TEATVIPFSTLEKVDGAYLEDGQL 259
Query: 202 PAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQI 261
G V + + + V G HN N A+A ++V L VD + + T+ HR+Q
Sbjct: 260 YFRGEVV-MAANEIGVPGSHNVEN-ALATIAVAKLR-DVDNQTIKETLSAFGGVKHRLQF 316
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
V DI+GV + +DSK+TN+ AT L K V++ GG + N F++L+
Sbjct: 317 VD-DIKGVKFYNDSKSTNILATQKALSGFDNSKVVLIAGGLDR------GNEFDELV 366
>gi|15900589|ref|NP_345193.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
pneumoniae TIGR4]
gi|111658685|ref|ZP_01409328.1| hypothetical protein SpneT_02000191 [Streptococcus pneumoniae
TIGR4]
gi|418129856|ref|ZP_12766740.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA07643]
gi|418186697|ref|ZP_12823227.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA47360]
gi|418229426|ref|ZP_12856035.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae EU-NP01]
gi|419477355|ref|ZP_14017180.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA18068]
gi|421210651|ref|ZP_15667640.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae 2070035]
gi|421242682|ref|ZP_15699204.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae 2081074]
gi|421246941|ref|ZP_15703429.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae 2082170]
gi|421270111|ref|ZP_15720968.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae SPAR48]
gi|30316108|sp|Q97RU8.1|MURD_STRPN RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|14972164|gb|AAK74833.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae TIGR4]
gi|353803148|gb|EHD83440.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA07643]
gi|353853283|gb|EHE33266.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA47360]
gi|353890565|gb|EHE70328.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae EU-NP01]
gi|379566737|gb|EHZ31724.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA18068]
gi|395575021|gb|EJG35593.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae 2070035]
gi|395610002|gb|EJG70083.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae 2081074]
gi|395615097|gb|EJG75114.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae 2082170]
gi|395870763|gb|EJG81876.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae SPAR48]
Length = 450
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 145/297 (48%), Gaps = 23/297 (7%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L G V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LAKGIPVLTEVELAYLI--SEAPIIGITGSNGKTTTTTMIGEVLTAAGQHGLLSGNIGYP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A + S K V+E+SS+Q+ + + F P ++V+ NL P H++ H +
Sbjct: 151 ASQVA----QIASDKDTL---VMELSSFQL-MGVQEFHPEIAVITNLMPTHIDYHGSFSE 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEV 201
Y K ++ + M +L F NQ L + + A + F ++ A ++
Sbjct: 203 YVAAKWNIQNKMTAADFLVLNF-NQDLAKDLTSK--TEATVVPFSTLEKVDGAYLEDGQL 259
Query: 202 PAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQI 261
G V + + + V G HN N A+A ++V L VD + + T+ HR+Q
Sbjct: 260 YFRGEVV-MAANEIGVPGSHNVEN-ALATIAVAKLR-DVDNQTIKETLSAFGGVKHRLQF 316
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
V DI+GV + +DSK+TN+ AT L K V++ GG + N F++L+
Sbjct: 317 VD-DIKGVKFYNDSKSTNILATQKALSGFDNSKVVLIAGGLDR------GNEFDELV 366
>gi|398915512|ref|ZP_10657361.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Pseudomonas sp.
GM49]
gi|398176281|gb|EJM64006.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Pseudomonas sp.
GM49]
Length = 448
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 144/295 (48%), Gaps = 40/295 (13%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+A++G+N KSTV T VG+M G VGGNLG P AL + ++ V+
Sbjct: 111 IVAISGSNAKSTVTTLVGEMAAAAGKRVAVGGNLGTP---------ALDLLRDDVELYVM 161
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLF----SHMVNTKLGL 160
E+SS+Q+E ++ V+ VLN++ DH++R+ + Y L K +F +VN + L
Sbjct: 162 ELSSFQLETTDQ-LNAEVATVLNVSEDHMDRYSGLPAYHLAKHRIFRGAKQFVVNRQDAL 220
Query: 161 LPFGNQHLNEAIKGHRFNL--AWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVM 218
+ E F L AF G++ + K +FE + + + +K+
Sbjct: 221 ---SRPLMGEGQPCWTFGLNKPDFKAF-GLREENGEKYLAFEFQNL-----MPVRELKIR 271
Query: 219 GRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKAT 278
G HN NA A G +G+ +A+ S++ HR Q V RD+ GV + +DSKAT
Sbjct: 272 GAHNQSNALAALAL--GHAVGLPFDAMLSSLRTFAGLEHRCQWV-RDLDGVGYYNDSKAT 328
Query: 279 NLEATCTGL----MDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPLNHH-RCVI 328
N+ A + D+ G K V++ GG K G E F+ L +P+ + R VI
Sbjct: 329 NVGAALAAIEGLGADIDG-KVVLIAGGDGK---GAE---FKDLRDPVAANCRAVI 376
>gi|398795215|ref|ZP_10555130.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Pantoea sp. YR343]
gi|398207046|gb|EJM93802.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Pantoea sp. YR343]
Length = 438
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 134/283 (47%), Gaps = 63/283 (22%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+A+TG+NGKSTV T VG+M G + VGGN+G P AL K Q+ V+
Sbjct: 107 IVAITGSNGKSTVTTLVGEMARAAGWQVGVGGNIGLP---------ALTLLKSPAQLYVL 157
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK-TMKNYALTKCHLFSH----MVNTKLG 159
E+SS+Q+E + + +LNLT DH++R+ M+ Y K ++ + +VN G
Sbjct: 158 ELSSFQLETTHS-LKAAAATILNLTEDHMDRYPLGMQQYRAAKLRIYENASVCVVNADDG 216
Query: 160 L---------------LPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAV 204
+ + G+ HLN+ + W+ A G K+
Sbjct: 217 MTMPVRGVDQRCVSFGINLGDYHLNQ-----QQGSTWLRA-KGEKV-------------- 256
Query: 205 GVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDI--GVDVEALNSTIEILRTPPHRMQIV 262
L M ++G+HNY NA A ++I ++AL + + HR Q+V
Sbjct: 257 -----LNTDEMTLVGQHNYTNALAALALADAVNIPRASSLKALTTFTGL----AHRFQLV 307
Query: 263 HRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCV-ILLGGQAK 304
H + +GV W++DSKATN+ +T L L+ + +LLGG K
Sbjct: 308 H-EAKGVRWINDSKATNVGSTEAALNGLQVKGTLWLLLGGDGK 349
>gi|307704498|ref|ZP_07641406.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
mitis SK597]
gi|307621911|gb|EFO00940.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
mitis SK597]
Length = 450
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 146/297 (49%), Gaps = 23/297 (7%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L G V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LTKGIPVLTEVELAYLI--SEAPIVGITGSNGKTTTTTMIGEVLTAAGQHGLLSGNIGYP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A S K V+E+SS+Q+ + + F P ++V+ NL P H++ H + +
Sbjct: 151 ASQVAQTA----SDKDTL---VMELSSFQL-MGVQEFHPEIAVITNLMPTHIDYHGSFEE 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEV 201
Y K ++ + M +L F NQ L + + A + F ++ A ++
Sbjct: 203 YVAAKWNIQNKMTAADFLVLNF-NQDLAKELASK--TQATVVPFSTLEKVDGAYLEDGQL 259
Query: 202 PAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQI 261
G V + + + V G HN N A+A ++V L GVD + + T+ HR+Q
Sbjct: 260 YFRGEVV-MAANEIGVPGSHNVEN-ALATIAVAKLR-GVDNQTIKETLSAFGGVKHRLQF 316
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
V +I+GV + +DSK+TN+ AT L K +++ GG + N F++L+
Sbjct: 317 VD-EIKGVKFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------GNEFDELV 366
>gi|158320410|ref|YP_001512917.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Alkaliphilus
oremlandii OhILAs]
gi|167017286|sp|A8MH34.1|MURD_ALKOO RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|158140609|gb|ABW18921.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Alkaliphilus
oremlandii OhILAs]
Length = 454
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 148/291 (50%), Gaps = 27/291 (9%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
L G ++ E++ A ++ I +A+TGTNGK+T + VG++ + G V GN+G
Sbjct: 90 LRARGIEIIGEIELAYRLAQGHI--VAITGTNGKTTTTSLVGEIFKNAGRRTHVVGNIG- 146
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQME-IPNKYFCPTVSVVLNLTPDHLERHKTM 139
AF AL ++ V V+E SS+Q+E I + F P V +LNLTPDHL RHKTM
Sbjct: 147 ----VAFISKALETTAD--DVIVIEASSFQLESIVD--FRPQVGAILNLTPDHLNRHKTM 198
Query: 140 KNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAF----PGVKIDTEAK 195
+NY K ++F + + ++ + + L E K + GV ++
Sbjct: 199 ENYQKAKFNIFKNQGAEDIAVINYDDVKLREESKQIYAKKVYFSRRTLLEEGVFVEDGKI 258
Query: 196 TASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTP 255
A + ++S+ ++ + G HN NA A + + L +GVD++ + T++ +
Sbjct: 259 VALKDGHKKEIISK---DDIFIPGNHNLENALAA--TAMTLSLGVDIDVIQHTLKTFKGV 313
Query: 256 PHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILL--GGQAK 304
HR +IV I GV +++DSK TN +A+ G ++G ILL GG K
Sbjct: 314 EHRTEIVDV-IHGVRFINDSKGTNPDASIKG---IEGINTPILLIAGGYDK 360
>gi|406660222|ref|ZP_11068356.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Cecembia
lonarensis LW9]
gi|405556100|gb|EKB51069.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Cecembia
lonarensis LW9]
Length = 450
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 131/278 (47%), Gaps = 35/278 (12%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
+ G V+ EL+FA + K++A+TGTNGK+T +L G+ + GN+G
Sbjct: 84 FEKGLPVIDELEFAFRF--SKGKVIAITGTNGKTTTALLTYHLLKKGGLNVGLAGNVGKS 141
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK-TMK 140
+ + V+EVSS+Q++ K+F P ++++ N+TPDHL+R+ +
Sbjct: 142 WAGQLV--------EQDHDWWVLEVSSFQID-GFKHFKPAIAMLTNITPDHLDRYGYQLD 192
Query: 141 NYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWI-----------GAFPGVK 189
NY L+K LF +M + ++ + N+ I + G F G+
Sbjct: 193 NYILSKMSLFQNMDLDQAAIINADDLLTNKGISFKPLTMDCYPVSLKTSQNQGGYFDGLN 252
Query: 190 IDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTI 249
+D AK + V+ + G+HN N+ +A L + GVD A+ +
Sbjct: 253 LDLIAKGKKISISHQEVI---------LKGKHNMLNSMMATLGAIL--AGVDEMAIREGL 301
Query: 250 EILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGL 287
+ + HRM+ V I GV +V+DSK TN++AT L
Sbjct: 302 QDFKNAAHRMEAVAT-IHGVAFVNDSKGTNVDATAYAL 338
>gi|417793528|ref|ZP_12440803.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
oralis SK255]
gi|334272813|gb|EGL91170.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
oralis SK255]
Length = 450
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 145/301 (48%), Gaps = 31/301 (10%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L G V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LAKGIPVLTEVELAYLI--SEAPIIGITGSNGKTTTTTMIGEVLTAAGQHGLLSGNIGYP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A A + V+E+SS+Q+ + + F P ++V+ NL P H++ H + +
Sbjct: 151 ASQVAQTATAKDT-------LVMELSSFQL-MGVQEFHPEIAVITNLMPTHIDYHGSFEA 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAI----KGHRFNLAWIGAFPGVKIDTEAKTA 197
Y K ++ ++M +L F NQ L + + + + G G + E
Sbjct: 203 YVAAKWNIQNNMAAADFLVLNF-NQDLAKELATKTQATVVPFSTKGKVDGAYL--ENGQL 259
Query: 198 SFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPH 257
F V S++ V G HN N A+A ++V L GVD + + T+ H
Sbjct: 260 YFRGEVVMTASEI-----GVPGSHNVEN-ALATIAVAKLR-GVDNQIIKETLSAFGGVKH 312
Query: 258 RMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKL 317
R+Q V +I+GV + +DSK+TN+ AT L K +++ GG + N F++L
Sbjct: 313 RLQFVD-EIKGVKFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------GNEFDEL 365
Query: 318 I 318
+
Sbjct: 366 V 366
>gi|194397716|ref|YP_002037343.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
pneumoniae G54]
gi|418120774|ref|ZP_12757720.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA44194]
gi|419442180|ref|ZP_13982211.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA13224]
gi|419490626|ref|ZP_14030366.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA47179]
gi|419531934|ref|ZP_14071452.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA47794]
gi|421274608|ref|ZP_15725440.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA52612]
gi|226722946|sp|B5E2Z8.1|MURD_STRP4 RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|4009480|gb|AAC95449.1| D-glutamic acid adding enzyme MurD [Streptococcus pneumoniae G54]
gi|194357383|gb|ACF55831.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae G54]
gi|353793601|gb|EHD73960.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA44194]
gi|379554147|gb|EHZ19227.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA13224]
gi|379594205|gb|EHZ59015.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA47179]
gi|379608690|gb|EHZ73435.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA47794]
gi|395875336|gb|EJG86417.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA52612]
Length = 450
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 146/297 (49%), Gaps = 23/297 (7%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L G V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LAKGIPVLTEVELAYLI--SEAPIIGITGSNGKTTTTTMIGEVLTAAGQHGLLSGNIGYP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A + + K V+E+SS+Q+ + + F P ++V+ NL P H++ H +
Sbjct: 151 ASQVA----QIATDK---NTLVMELSSFQL-MGVQEFHPEIAVITNLMPTHIDYHGLFEE 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEV 201
Y K ++ + M +L F NQ L + + A + F ++ A ++
Sbjct: 203 YVAAKWNIQNKMTAADFLVLNF-NQDLVKDLASK--TEATVVPFSTLEKVDGAYLEDGQL 259
Query: 202 PAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQI 261
G V + + + V G HN N A+A ++V L GVD + + T+ HR+Q
Sbjct: 260 YFRGEVV-MAANEIGVPGSHNVEN-ALATIAVAKLR-GVDNQTIKETLSAFGGVKHRLQF 316
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
V DI+GV + +DSK+TN+ AT L K V++ GG + N F++L+
Sbjct: 317 VD-DIKGVKFYNDSKSTNILATQKALSGFDNSKVVLIAGGLDR------GNEFDELV 366
>gi|33240888|ref|NP_875830.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
[Prochlorococcus marinus subsp. marinus str. CCMP1375]
gi|60390538|sp|Q7VAM1.1|MURD_PROMA RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|33238417|gb|AAQ00483.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Prochlorococcus
marinus subsp. marinus str. CCMP1375]
Length = 470
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 147/295 (49%), Gaps = 26/295 (8%)
Query: 18 LACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGN 77
L L + G V SE++ A + + ++ + +TGTNGK+TV + +LN+ IE+ +GGN
Sbjct: 93 LNQLRKRGIIVESEINLAWRAL-KNTPWVGITGTNGKTTVTHMLNHVLNNSFIESTIGGN 151
Query: 78 LGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK 137
+G +E A KPK+ ++E+SSYQ+E + P + + LTPDHLERH
Sbjct: 152 VGKAATEIALALRKSTKHKPKW--LIMELSSYQIETAPE-ISPEIGIWTTLTPDHLERHG 208
Query: 138 TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLA---WIGAFPGVKIDTEA 194
+++NY K L + N+ + + +++L++ +R NL W+ A K ++
Sbjct: 209 SLENYFAIKRTL---IANSSIRIYNADDKYLSK----NRLNLPKGLWVSA---QKYNSNI 258
Query: 195 KTASFEVPAVGVVSQ-----LQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTI 249
F + + G+V + +++ G HN N + +S IG+ A+ + +
Sbjct: 259 NQLDFWISSNGMVIEQGNELFHSSALQLPGDHNLQN--LLLVSAAARKIGLSGMAIENAL 316
Query: 250 EILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
HR++ V + I + +DSKATN ++ GL +++ GG +K
Sbjct: 317 ISFAGITHRLEKVDKIID-IDIFNDSKATNFDSAEIGLKATSA-PVILIAGGLSK 369
>gi|418193336|ref|ZP_12829829.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA47439]
gi|353860059|gb|EHE40006.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA47439]
Length = 450
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 145/297 (48%), Gaps = 23/297 (7%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L G V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LAKGIPVLTEVELAYLI--SEAPIIGITGSNGKTTTTTMIGEVLTAAGQHGLLSGNIGYP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A + S K V+E+SS+Q+ + + F P ++V+ NL P H++ H +
Sbjct: 151 ASQVA----QIASDKDTL---VMELSSFQL-MGVQEFHPEIAVITNLMPTHIDYHGSFSE 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEV 201
Y K ++ + M +L F NQ L + + A + F ++ A ++
Sbjct: 203 YVAAKWNIQNKMTAADFLVLNF-NQDLAKDLTSK--TEATVIPFSTLEKVDGAYLEDGQL 259
Query: 202 PAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQI 261
G V + + + V G HN N A+A ++V L VD + + T+ HR+Q
Sbjct: 260 YFRGEVV-MAANEIGVPGSHNVEN-ALATIAVAKLR-DVDNQTIKETLSAFGGVKHRLQF 316
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
V DI+GV + +DSK+TN+ AT L K V++ GG + N F++L+
Sbjct: 317 VD-DIKGVKFYNDSKSTNILATQKALSGFDNSKVVLIAGGLDR------GNEFDELV 366
>gi|329298857|ref|ZP_08256193.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Plautia stali
symbiont]
Length = 439
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 134/284 (47%), Gaps = 64/284 (22%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+A+TG+NGKSTV T VG+M G + VGGN+G P + L S + V V+
Sbjct: 107 IVAITGSNGKSTVTTLVGEMARAAGWQVGVGGNIGLP-------ALTLLKSPAQLYV-VL 158
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK-TMKNYALTKCHLFSH----MVNTKLG 159
E+SS+Q+E + +LN+T DH++R+ M+ Y K ++ + +VN G
Sbjct: 159 ELSSFQLET-TYSLKAAAATILNVTEDHMDRYPLGMQQYRAAKLRIYENADICVVNADDG 217
Query: 160 L---------------LPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAV 204
+ + G+ HLN+ + W+ G K+
Sbjct: 218 MTMPVRGADRRCVSFGIDVGDYHLNQ-----QQGSTWL-RVKGEKV-------------- 257
Query: 205 GVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTP---PHRMQI 261
L MK++G+HNY NA A ++I L S+++ L T PHR Q+
Sbjct: 258 -----LNTDEMKLVGQHNYTNALAALALADAVNI-----PLASSLKALTTYSGLPHRFQL 307
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCV-ILLGGQAK 304
VH + GV W++DSKATN+ +T L L+ + +LLGG K
Sbjct: 308 VH-EAHGVRWINDSKATNVGSTEAALNGLQVKGTLWLLLGGDGK 350
>gi|160891418|ref|ZP_02072421.1| hypothetical protein BACUNI_03868 [Bacteroides uniformis ATCC 8492]
gi|317478449|ref|ZP_07937609.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides sp.
4_1_36]
gi|156858825|gb|EDO52256.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Bacteroides
uniformis ATCC 8492]
gi|316905338|gb|EFV27132.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides sp.
4_1_36]
Length = 443
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 146/305 (47%), Gaps = 30/305 (9%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
L + G ++SE++FA + K++ +TG+NGK+T + + + G+ + GN+GN
Sbjct: 81 LKEKGTPIISEIEFAGRYT--DAKMVCITGSNGKTTTTSLIYHIFKSAGLNVGLAGNIGN 138
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDHLERHK-T 138
L AL + + V+E+SS+Q++ N Y F ++V++N+TPDHL+R+
Sbjct: 139 SL--------ALQVATEQHDYYVIELSSFQLD--NMYNFRANIAVLMNITPDHLDRYDHC 188
Query: 139 MKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKID-----TE 193
M+ Y K + + + + + + H A + F VK D E
Sbjct: 189 MQKYVDAKFRITQNQTPEDAFIFWNDDPIIKRELDKHGLR-AHLYPFAAVKEDGAIAYVE 247
Query: 194 AKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILR 253
P + ++ + + G HN +N+ A +S L G+ E + + +
Sbjct: 248 DGEVEINEP---IAFNMEQEELALHGTHNLYNSLAAGISA-NL-AGIRKEYIRKALSDFK 302
Query: 254 TPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNG 313
HR++ V ++GV++++DSKATN+ + L + G K V++LGG+ K G +
Sbjct: 303 GVEHRLEKVAT-VRGVSFINDSKATNVNSCWYALQSMTG-KTVLILGGKDK---GNDYTE 357
Query: 314 FEKLI 318
E L+
Sbjct: 358 IEDLV 362
>gi|417935636|ref|ZP_12578953.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
infantis X]
gi|343402545|gb|EGV15050.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
infantis X]
Length = 450
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 144/300 (48%), Gaps = 29/300 (9%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L+ G V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LEKGIPVLTEVELAYLI--SEAPIVGITGSNGKTTTTTMIGEVLTAAGQNGLLSGNIGYP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A + V+E+SS+Q+ + + F P ++V+ NL P H++ H + ++
Sbjct: 151 ASQVA-------QTATDKDTLVMELSSFQL-MGIQEFHPEIAVITNLMPTHIDYHGSFED 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDT---EAKTAS 198
Y K ++ S+M +L F NQ L + + + N + K+D E
Sbjct: 203 YVAAKWNIQSNMTAADYLVLNF-NQELAKEL-ATKTNATVVPFSTLEKVDGAYLEDGLLY 260
Query: 199 FEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHR 258
F V + + V G HN N A+A ++V L VD E + T+ HR
Sbjct: 261 FRGEKV-----MAADEIGVPGSHNVEN-ALATIAVAKLR-SVDNETIKETLSGFGGVKHR 313
Query: 259 MQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
+Q V + I GV + +DSK+TN+ AT L K +++ GG + N F++L+
Sbjct: 314 LQFVDQ-INGVKFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------GNEFDELV 366
>gi|385263157|ref|ZP_10041249.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
sp. SK643]
gi|385188471|gb|EIF35956.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
sp. SK643]
Length = 450
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 148/303 (48%), Gaps = 29/303 (9%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L G V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LAKGIPVLTEVELAYLI--SEAPIVGITGSNGKTTTTTMIGEVLTAAGQHGLLSGNIGYP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A + V+E+SS+Q+ + + F P ++V+ NL P H++ H T +
Sbjct: 151 ASQVA-------QTATDKDTLVMELSSFQL-MGIQDFHPEIAVITNLMPTHIDYHGTFEE 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGV-KIDTEAKTASFE 200
Y K ++ +M T +L F NQ L + + A + F + K+D A E
Sbjct: 203 YVDAKWNIQKNMTATDFLVLNF-NQDLAKELATK--TEAEVVPFSTLEKVD----GAYLE 255
Query: 201 VPAVGVVSQLQL--HNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHR 258
+ +L + + V G HN N A+A + V L GVD + + T+ HR
Sbjct: 256 DGQLYFRGELVMAADEIGVPGSHNVEN-ALATIVVSKLR-GVDNQTIKETLAAFGGVKHR 313
Query: 259 MQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
+Q V +I+GV + +DSK+TN+ AT L K +++ GG + N F++L+
Sbjct: 314 LQFVD-EIKGVKFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------GNEFDELV 366
Query: 319 EPL 321
+ +
Sbjct: 367 QDI 369
>gi|149198597|ref|ZP_01875641.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Lentisphaera
araneosa HTCC2155]
gi|149138312|gb|EDM26721.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Lentisphaera
araneosa HTCC2155]
Length = 437
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 144/299 (48%), Gaps = 46/299 (15%)
Query: 21 LLQSGKRV----MSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGG 76
L Q+ K+ M ELDFAA+ +P++ K LA+TGTNGK+T L +L EA G
Sbjct: 84 LYQAAKKASVNFMGELDFAAKFMPQT-KFLAITGTNGKTTCTEMTQHTLKNLDYEAVACG 142
Query: 77 NLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPN--KYFCPTVSVVLNLTPDHLE 134
N+G PL+E +AL ++P F AVVE+SSYQ+++ + K+ +++LN++ DH++
Sbjct: 143 NIGLPLAE-----VALRDNQPDF--AVVEISSYQIDLLSSLKF---DAAIILNVSEDHMD 192
Query: 135 RHKTMKNYALTKCHL--FSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDT 192
R+ T Y +K + F H + + Q + A F++ D
Sbjct: 193 RYGTFDKYLDSKLMIRKFCHFLAVQ--------QDVECAQADMVFSIG----------DE 234
Query: 193 EAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNA--AVAALSVLGLDIGVDVEALNSTIE 250
+A E ++ L G+HN NA +A L+ +D+ + A++
Sbjct: 235 KADLMIGEELFQYRDQKIPLPKFSFYGKHNLENALGVLALLNSQKIDLQKSLLAMSD--- 291
Query: 251 ILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDL--KGHKCVILLGGQAKVLN 307
HR++ Q V +V+DSK+TN + L K K V++ GG+ K ++
Sbjct: 292 -FTCSEHRLEDFAT-YQNVLYVNDSKSTNPASLMVALETFADKNKKIVLIAGGRDKNMD 348
>gi|254303962|ref|ZP_04971320.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Fusobacterium
nucleatum subsp. polymorphum ATCC 10953]
gi|148324154|gb|EDK89404.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Fusobacterium
nucleatum subsp. polymorphum ATCC 10953]
Length = 432
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 148/325 (45%), Gaps = 67/325 (20%)
Query: 9 LEFQLKATGLAC------LLQSGKRVMSELDFAAQ-VIPRSIK--ILAVTGTNGKSTVVT 59
LEF +K+ G+ + + G +++ E++ A +I + +K I+A+TGTNGKST
Sbjct: 48 LEFFIKSPGIPYNDFVKEVQKRGIKILDEIEIAYNYMIEKDLKTKIIAITGTNGKSTTTA 107
Query: 60 FVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQME-IPNKYF 118
+ MLNH G +A GN+G LSE + +E+SS+Q+E + N F
Sbjct: 108 KISDMLNHAGYKAAYAGNIGRSLSEVLL-------KEKDLDFISLELSSFQLENVEN--F 158
Query: 119 CPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFN 178
P +S+++N+ PDH+ER+K+ Y TK ++ +K +
Sbjct: 159 KPYISMIINMGPDHIERYKSFDEYYDTKFNI----------------------VKNQTED 196
Query: 179 LAWIGAFPGVKIDTEAK--------TASFEVPAVGVVSQ---------LQLHNMKVMGRH 221
L +I V+I+ AK + F+ + V + + + + + G H
Sbjct: 197 LYFIENIDDVEIEKRAKQIKAKRISVSKFKKADIFVKNDKICHGENTIIDVDKLSLKGIH 256
Query: 222 NYHNA--AVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATN 279
N N VA +L +D E L + I HR ++ + + +++DSKATN
Sbjct: 257 NLENTLFMVATAEIL----KIDKEKLKEFLMIATPLEHRTELFF-NYGKLKFINDSKATN 311
Query: 280 LEATCTGLMDLKGHKCVILLGGQAK 304
+++T + K +++ GG K
Sbjct: 312 VDSTKFAIQANKN--SILICGGYDK 334
>gi|398983529|ref|ZP_10690074.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Pseudomonas sp.
GM24]
gi|399015251|ref|ZP_10717527.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Pseudomonas sp.
GM16]
gi|398109262|gb|EJL99201.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Pseudomonas sp.
GM16]
gi|398157108|gb|EJM45512.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Pseudomonas sp.
GM24]
Length = 448
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 143/295 (48%), Gaps = 40/295 (13%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+A++G+N KSTV T VG+M G VGGNLG P AL ++ V+
Sbjct: 111 IVAISGSNAKSTVTTLVGEMAAAAGKRVAVGGNLGTP---------ALDLLSDDVELYVM 161
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLF----SHMVNTKLGL 160
E+SS+Q+E ++ V+ VLN++ DH++R+ + Y L K +F +VN + L
Sbjct: 162 ELSSFQLETTDQ-LNAEVATVLNISEDHMDRYSGLPAYHLAKHRIFRGAKQFVVNRQDAL 220
Query: 161 LPFGNQHLNEAIKGHRFNLAW--IGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVM 218
+ E F L+ AF G++ + K +FE + + + +K+
Sbjct: 221 T---RPLMGEGQPCWTFGLSKPDFKAF-GIREEDGEKYLAFEFQNL-----MPVRELKIR 271
Query: 219 GRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKAT 278
G HN NA A LG +G+ +A+ S + HR Q V RD+ GV + +DSKAT
Sbjct: 272 GAHNQSNALAA--LALGHAVGLPFDAMLSALRTFAGLEHRCQWV-RDLDGVAYYNDSKAT 328
Query: 279 NLEATCTGL----MDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPLNHH-RCVI 328
N+ A + D+ G K +++ GG K G E F L +P+ + R VI
Sbjct: 329 NVGAALAAIEGLGTDING-KVILIAGGDGK---GAE---FNDLRDPVAANCRAVI 376
>gi|419706467|ref|ZP_14233988.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
salivarius PS4]
gi|383283788|gb|EIC81731.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
salivarius PS4]
Length = 450
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 149/315 (47%), Gaps = 31/315 (9%)
Query: 18 LACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGN 77
+A L+ G V +E++ A V I+ +TG+NGK+T T + +LNH G + GN
Sbjct: 89 VARALEKGIPVWTEVELAYLV--SEAPIIGITGSNGKTTTTTMIADVLNHGGKSGVLSGN 146
Query: 78 LGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK 137
+G P SE A A + V+E+SS+Q+ + F P ++V+ NL P H++ H
Sbjct: 147 IGFPASEVAQSVTAQDT-------LVMELSSFQL-MGIDSFHPHIAVITNLMPTHIDYHG 198
Query: 138 TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGV-KIDTEAKT 196
+ + Y K ++ + M + +L F NQ L + + A + F V K+D
Sbjct: 199 SFEAYVAAKWNIQNRMTSDDFIILNF-NQDLAKELATK--TEAQVVPFSTVEKVD----G 251
Query: 197 ASFEVPAVGVVSQL--QLHNMKVMGRHNYHNA-AVAALSVLGLDIGVDVEALNSTIEILR 253
A E + +L Q + V G HN NA A A+S L G+ +A+ T+
Sbjct: 252 AYLENGGLYYKGELIMQADEIGVPGSHNVENALATIAVSKLS---GISNQAIKETLAGFG 308
Query: 254 TPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNG 313
HR+Q V I V + +DSK+TN+ AT L K +++ GG + N
Sbjct: 309 GVKHRLQFVDT-INDVKFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------GNE 361
Query: 314 FEKLIEPLNHHRCVI 328
F++L+ + + +I
Sbjct: 362 FDELVPDITGVKKMI 376
>gi|126665248|ref|ZP_01736231.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Marinobacter
sp. ELB17]
gi|126630618|gb|EBA01233.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Marinobacter
sp. ELB17]
Length = 448
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 145/328 (44%), Gaps = 71/328 (21%)
Query: 27 RVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAA 86
R+ ++D A+ I+A+TG+NGK+TV T V M G + VGGN+G P
Sbjct: 95 RIRGDIDLFAEAA--DAPIIAITGSNGKTTVTTLVADMARDAGYQVAVGGNIGTP----- 147
Query: 87 FHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTK 146
AL ++ V+E+SS+Q+E ++ + VLN++ DH++R+ Y K
Sbjct: 148 ----ALDLLNTGARLYVLELSSFQLETTDE-LNALAATVLNVSDDHMDRYPDKMAYYQAK 202
Query: 147 CHLF---------------SHMVNTKLGLLPFGNQHLN--------EAIKGHRFNLAWIG 183
+F + M L + FG +N +++ GH + + W
Sbjct: 203 QRIFRGCQYAIVNLDDALSTPMARNTLRFICFGMNRVNPETFSTRDDSVSGHPW-VTW-- 259
Query: 184 AFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVE 243
G+ + ++ + ++GRHN N +AAL LG G+ ++
Sbjct: 260 ---------------------GLDNLIRADELGLVGRHNLSN-VMAALG-LGKAAGLPMD 296
Query: 244 ALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDL--KGHKCVILLGG 301
++ +T PHR + + R + GV +++DSK TN+ AT L L K V++ GG
Sbjct: 297 SMLATARAFHGLPHRCESL-RLVNGVEYINDSKGTNVGATVAALDSLAPAAGKIVLIAGG 355
Query: 302 QAKVLNGQESNGFEKLIEPLNHH-RCVI 328
K + F L +P H R V+
Sbjct: 356 DGKGAD------FSPLADPARRHCRAVV 377
>gi|188532900|ref|YP_001906697.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Erwinia
tasmaniensis Et1/99]
gi|188027942|emb|CAO95799.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Erwinia
tasmaniensis Et1/99]
Length = 438
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 132/265 (49%), Gaps = 27/265 (10%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+A+TG+NGKSTV T VG+M G + VGGN+G P A + P+ Q+ V+
Sbjct: 107 IVAITGSNGKSTVTTLVGEMARAAGWQVGVGGNIGLP----ALTLLQQPA-----QLYVL 157
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK-TMKNYALTKCHLFSHMVNTKLGLLPF 163
E+SS+Q+E + + +LN+T DH++R+ M+ Y K ++ + +
Sbjct: 158 ELSSFQLETTSS-LKAAAATLLNVTEDHMDRYPLGMQQYRAAKLRIYENATACVVN---- 212
Query: 164 GNQHLNEAIKGHRFNLAWIGA-FPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHN 222
+ + I+G GA F + + + V V++ ++H ++G+HN
Sbjct: 213 ADDAMTMPIRGADARCVSFGADFGDYHLTRQQGSTWLRVQGEKVLNTDEMH---LVGQHN 269
Query: 223 YHN--AAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNL 280
Y N AA+A +GL ++AL + PHR Q+VH GV W++DSKATN+
Sbjct: 270 YTNALAALALADAVGLPRATSLKALTT----FNGLPHRFQLVHEH-NGVRWINDSKATNV 324
Query: 281 EATCTGLMDLKGHKCV-ILLGGQAK 304
+T L L + +LLGG K
Sbjct: 325 GSTEAALNGLHPAGTLWLLLGGDGK 349
>gi|77460896|ref|YP_350403.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Pseudomonas
fluorescens Pf0-1]
gi|118595675|sp|Q3K742.1|MURD_PSEPF RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|77384899|gb|ABA76412.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Pseudomonas
fluorescens Pf0-1]
Length = 448
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 142/295 (48%), Gaps = 40/295 (13%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+A++G+N KSTV T VG+M G VGGNLG P AL ++ V+
Sbjct: 111 IVAISGSNAKSTVTTLVGEMAAAAGKRVAVGGNLGTP---------ALDLLSDDVELYVM 161
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLF----SHMVNTKLGL 160
E+SS+Q+E ++ V+ VLN++ DH++R+ + Y L K +F +VN + L
Sbjct: 162 ELSSFQLETTDQ-LNAEVATVLNISEDHMDRYSGLPAYHLAKHRIFRGAKQFVVNRQDAL 220
Query: 161 LPFGNQHLNEAIKGHRFNLAW--IGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVM 218
+ E F L+ AF G++ + K +FE + + + +K+
Sbjct: 221 T---RPLMGEGQPCWTFGLSKPDFKAF-GLREENGEKYLAFEFQNL-----MPVRELKIR 271
Query: 219 GRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKAT 278
G HN NA A G +G+ +A+ + HR Q V RD+ GV + +DSKAT
Sbjct: 272 GAHNQSNALAALAL--GHAVGLPFDAMLVALRTFAGLEHRCQWV-RDLDGVGYYNDSKAT 328
Query: 279 NLEATCTGL----MDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPLNHH-RCVI 328
N+ A + D+ G K V++ GG K G E F+ L +P+ H R VI
Sbjct: 329 NVGAALAAIEGLGADIDG-KVVLIAGGDGK---GAE---FKDLRDPVATHCRAVI 376
>gi|71277817|ref|YP_271115.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Colwellia
psychrerythraea 34H]
gi|81174947|sp|Q47VQ7.1|MURD_COLP3 RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|71143557|gb|AAZ24030.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Colwellia
psychrerythraea 34H]
Length = 471
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 133/270 (49%), Gaps = 25/270 (9%)
Query: 43 IKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQ-- 100
+K+LAVTG+NGKSTVV+ + + +G+ A + GN+G P+ H + +S+ Q
Sbjct: 120 MKMLAVTGSNGKSTVVSLLASLAKAIGVNAALAGNIGEPILN-LLHRENVYNSQLANQPD 178
Query: 101 VAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGL 160
+ +VE+SS+Q+E + S VLNL+ DHL+RHKT+ NY K ++ K+ +
Sbjct: 179 IVIVELSSFQLETLSSMHAIAAS-VLNLSDDHLDRHKTLANYQAIKQSIYPQ---AKIAV 234
Query: 161 LPFGNQHLNEAIKGHR-----FNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNM 215
+ +Q N + N F ID + V G + + + +
Sbjct: 235 VSREDQASNTLVAAQEIISFGLNKPEQDCFGLQAIDNKM------VMMFGEQALISIDEL 288
Query: 216 KVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDS 275
+ G HN N +AAL+ LG G + A+ + HR Q V + + W++DS
Sbjct: 289 PLAGMHNALN-YMAALA-LGYSAGWSLSAMTENLAGFMGLAHRCQRVASE-DYIQWINDS 345
Query: 276 KATNLEAT---CTGLM-DLKGHKCVILLGG 301
KATN+ AT TGL+ L G +IL+ G
Sbjct: 346 KATNVGATLAAITGLVPTLTGQNKLILIAG 375
>gi|374595525|ref|ZP_09668529.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Gillisia limnaea
DSM 15749]
gi|373870164|gb|EHQ02162.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Gillisia limnaea
DSM 15749]
Length = 447
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 154/300 (51%), Gaps = 20/300 (6%)
Query: 15 ATGLACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFV 74
AT + L+ G V+SE++FA++ KI+A+TG+NGK+T ++ +L + I A +
Sbjct: 79 ATIVKKLVSQGIPVVSEIEFASKYT--DAKIIAITGSNGKTTTTKWIHHILKNARISAGI 136
Query: 75 GGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQME-IPNKYFCPTVSVVLNLTPDHL 133
GN+G+ ++ ++ KF V+E+SS+Q++ I + F P ++V+ N+TPDHL
Sbjct: 137 AGNVGDSFAKQV--------AEEKFDWYVLELSSFQLDGIVD--FKPHIAVLTNITPDHL 186
Query: 134 ERHK-TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDT 192
+R+ + Y +K + + + + + E + H + K++
Sbjct: 187 DRYNYNLDEYVASKFRITKNQTEEDFFIYDADDNIITEWLNTHSVRAQKLPFSLQKKLEK 246
Query: 193 EAKTASFEVPAVGVVSQLQL--HNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIE 250
A + + +Q + ++ + G+HN N A+AA +V L + + E + +++E
Sbjct: 247 GAYLEDNNIKINTLNTQFIMPTSSIALEGKHNTKN-AMAASTVANL-LKIRKETIRASME 304
Query: 251 ILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQE 310
+ HR++ V + I V +++DSKATN+ AT L ++ + + ++GG K N E
Sbjct: 305 GFQAVEHRLEKVLK-INNVLYINDSKATNINATYYALDSMES-ETIWIVGGVDKGNNYSE 362
>gi|126726619|ref|ZP_01742459.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Rhodobacterales
bacterium HTCC2150]
gi|126703948|gb|EBA03041.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Rhodobacterales
bacterium HTCC2150]
Length = 465
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 131/281 (46%), Gaps = 45/281 (16%)
Query: 44 KILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAV 103
K++A+TG+NGKST + +L +G + + GN+G + + +V V
Sbjct: 121 KVIAITGSNGKSTTSALMHHILTRVGRPSQLAGNIGRGVLDI--------DPAIDGEVVV 172
Query: 104 VEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFS------------ 151
+E+SSYQ ++ + P V+V NL+PDHL+RH M Y K LF+
Sbjct: 173 LELSSYQTDLA-RSLTPDVAVFTNLSPDHLDRHGGMGGYFAAKRRLFAEGGPDRAVIGVD 231
Query: 152 ----HMVNTKLGLLPFGNQHLNEAIKGHRFNLAW-IGAFPGVKIDTEAKTASFEVPAVGV 206
M+ +L P ++ + ++ G + W I G +T
Sbjct: 232 EAEGRMLANQLAEGPVDDRVIRVSVAGKLTGMGWNIFVKKGFLAETRKGKQ--------- 282
Query: 207 VSQLQLHNMKVM-GRHNYHNAAV--AALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVH 263
V+ + L ++ + G HN+ NAA+ AAL LGL V + + PHR Q V
Sbjct: 283 VASIDLRSVAALPGVHNHQNAAMVYAALRTLGLAPKV----IEAGFHDFAGLPHRSQPVG 338
Query: 264 RDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
+I GV +++DSKATN+++ L K + ++ GGQAK
Sbjct: 339 -EIDGVKYINDSKATNVDSAAMALKAFKNIRWIV--GGQAK 376
>gi|269967387|ref|ZP_06181447.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio
alginolyticus 40B]
gi|269827975|gb|EEZ82249.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio
alginolyticus 40B]
Length = 437
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 152/325 (46%), Gaps = 57/325 (17%)
Query: 18 LACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGN 77
+ +L G V+ +++ A + + ++A+TG+NGKSTV G M G++ VGGN
Sbjct: 85 IQAVLAKGTAVVGDIELFAWAVQK--PVIAITGSNGKSTVTDLTGVMAKAAGLDVGVGGN 142
Query: 78 LGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK 137
+G P AL + + V+E+SS+Q+E + + LNL+ DH++R++
Sbjct: 143 IGVP---------ALDLLEQDADLYVLELSSFQLETMSSLKL-KAAAFLNLSEDHMDRYQ 192
Query: 138 TMKNYALTKCHLFSHMV-------------NTKLGLLPFG--NQHLNEAIKGHRFNLAWI 182
M +Y K +F+H + ++ L+ FG NQ + G+R W+
Sbjct: 193 GMSDYRQAKLRIFNHAALAVVNRDDQETFPDAEMPLVTFGSDNQDFGFEVDGNR---TWL 249
Query: 183 GAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDV 242
+D + + + +K++G+HN NA VA + D+
Sbjct: 250 -------LDHGQRVVASD-------------ELKLVGKHNLSNALVALALLKAADVNYH- 288
Query: 243 EALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGH-KCVILLGG 301
ALN+ ++ HR Q+V D QGV WV+DSKATN+ +T L L+ K +L+GG
Sbjct: 289 NALNA-LKNYTGLTHRCQVV-ADNQGVKWVNDSKATNIASTMAALSGLESTGKLYLLVGG 346
Query: 302 QAKVLNGQESNGFEKLIEPLNHHRC 326
K G + + + + LN C
Sbjct: 347 VGK---GADFSPLKPIFATLNLQLC 368
>gi|253681289|ref|ZP_04862087.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Clostridium
botulinum D str. 1873]
gi|253562527|gb|EES91978.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Clostridium
botulinum D str. 1873]
Length = 458
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 137/283 (48%), Gaps = 28/283 (9%)
Query: 23 QSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPL 82
+SG + SE++ + P K+ +TG++GK+T T V ML G + +VGGN+GNPL
Sbjct: 99 ESGSYITSEMEEFIKYCP--AKVFGITGSDGKTTTTTLVYNMLKSQGYKTWVGGNIGNPL 156
Query: 83 SEAAFHCIALPSSKPKFQVAVVEVSSYQ-MEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
F I + + K V+E+SS+Q M I C ++V NL+P+HL+ HK M+
Sbjct: 157 ----FANIERMTKEDK---VVLELSSFQLMTINEDINC---ALVTNLSPNHLDVHKDMEE 206
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKT-ASFE 200
Y K ++F + L +L N+ N+ + + G I E A F+
Sbjct: 207 YVNAKKNIFKYQNENDLLVLNRDNKITNDLVNEAK------GRVKQFSIKEEINNGAYFK 260
Query: 201 VPAVGVVSQ--LQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHR 258
+ ++ + L +K+ G HN N +AA ++ D+ VD+ + HR
Sbjct: 261 NNKLFILDKEVCALEEVKLKGMHNVEN-LLAAFCLVHEDVNVDI--MRKVATTFTGVEHR 317
Query: 259 MQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGG 301
+ V R++ GV + +DS A++ T GL K VIL+ G
Sbjct: 318 CEFV-RELDGVKYYNDSIASSPTRTIAGLRAF--EKPVILIAG 357
>gi|210622333|ref|ZP_03293102.1| hypothetical protein CLOHIR_01050 [Clostridium hiranonis DSM 13275]
gi|210154321|gb|EEA85327.1| hypothetical protein CLOHIR_01050 [Clostridium hiranonis DSM 13275]
Length = 455
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 147/285 (51%), Gaps = 15/285 (5%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
+++ K ++ E++ A ++ + + +TGTNGK+T + G++ G E +V GN+GN
Sbjct: 93 VIEENKELIGEVELAYELANKPY-FVGITGTNGKTTTTSLTGEIFEKAGKETYVVGNIGN 151
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMK 140
P+ +A + + F V E+SS+Q+E K F P+VS VLN+T DH+ RH TM+
Sbjct: 152 PVIDA----VQAANEGASF---VTELSSFQLE-SIKDFKPSVSAVLNITEDHMNRHHTME 203
Query: 141 NYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFE 200
NY K +F + +L + ++ + N+ + ++ +
Sbjct: 204 NYIDAKARVFMNQDKNDFCVLNYDDELTRALAEKCNANVVFFSRLEKLEKGIYVENGDII 263
Query: 201 VPAVGVVSQLQLHNMKVMGRHNYHNA-AVAALSVLGLDIGVDVEALNSTIEILRTPPHRM 259
+ ++ +++ + + G HN N A AA++ + G+D+E + ++ + HR+
Sbjct: 264 IDIDEKINLMKVCELSLPGGHNLENCMAAAAMAYVS---GIDIEVIREVLKTFKAVEHRL 320
Query: 260 QIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
+ V ++++GV +V+DSK TN ++T + + + +++ GG K
Sbjct: 321 EFV-KEVEGVKYVNDSKGTNPDSTIKAVQAYE-NPIILIAGGYDK 363
>gi|409417636|ref|ZP_11257669.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Pseudomonas
sp. HYS]
Length = 448
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 130/267 (48%), Gaps = 27/267 (10%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+A++G+N KSTV T VG+M G VGGNLG P AL ++ V+
Sbjct: 111 IIAISGSNAKSTVTTLVGEMAAAAGKRVAVGGNLGTP---------ALDLLSDDVELYVM 161
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLF---SHMVNTKLGLL 161
E+SS+Q+E ++ V+ VLN++ DH++R+ + Y L K +F +V + L
Sbjct: 162 ELSSFQLETTDQ-LNAEVATVLNVSEDHMDRYSGLPAYHLAKHRIFRGARQVVVNRQDAL 220
Query: 162 PFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRH 221
+ + N AF G++ + K +FE + + + +K+ G H
Sbjct: 221 SRPLLAEGQPVWTFGLNTPDFKAF-GLREENGEKYLAFEFHNL-----MPVRELKIRGAH 274
Query: 222 NYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLE 281
N NA A LG +G+ ++A+ S++ HR Q + R+ GV W DDSKATN+
Sbjct: 275 NQSNALAA--LALGHAVGLPMDAMLSSLRSFAGLAHRCQWI-RERNGVNWYDDSKATNVG 331
Query: 282 ATCTGL----MDLKGHKCVILLGGQAK 304
A + D+ G K V++ GG K
Sbjct: 332 AALAAIEGLGADIDG-KLVLVAGGDGK 357
>gi|153952827|ref|YP_001393592.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Clostridium
kluyveri DSM 555]
gi|219853492|ref|YP_002470614.1| hypothetical protein CKR_0149 [Clostridium kluyveri NBRC 12016]
gi|189082874|sp|A5N4L3.1|MURD_CLOK5 RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|254766045|sp|B9DY75.1|MURD_CLOK1 RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|146345708|gb|EDK32244.1| MurD [Clostridium kluyveri DSM 555]
gi|219567216|dbj|BAH05200.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 458
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 136/279 (48%), Gaps = 20/279 (7%)
Query: 23 QSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPL 82
+ G + SE++ + P KI VTG++GK+T T + +L G ++++GGN+G PL
Sbjct: 99 EKGAYITSEMEEFIRYCP--AKIYGVTGSDGKTTTTTLMYNILKKQGYKSWIGGNIGTPL 156
Query: 83 SEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNY 142
P + V+E+SS+Q+ N P V+V+ N++P+HL+ HK M+ Y
Sbjct: 157 FSEVEEIT--PDDR-----VVIELSSFQLMTMN--ISPEVAVITNVSPNHLDIHKDMEEY 207
Query: 143 ALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVP 202
+ K ++F + N+ L +L N+ L ++ G L + F + + + +
Sbjct: 208 IMAKKNIFKYQSNSDLLVLNKDNE-LTNSMTGEA--LGKVRQFSIKEKLNKGGYLNKDSL 264
Query: 203 AVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIV 262
+ +L +K+ G HN N +AA L D V++E++ HR + V
Sbjct: 265 CIDGDEVCKLSEIKLKGMHNVENL-LAAFCALKDD--VNIESMREIATTFSGVEHRCEFV 321
Query: 263 HRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGG 301
R+I GV + +DS A++ T GL K VIL+ G
Sbjct: 322 -REINGVKYYNDSIASSPTRTLAGLKAF--EKPVILIAG 357
>gi|319947490|ref|ZP_08021722.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Streptococcus
australis ATCC 700641]
gi|417919785|ref|ZP_12563309.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
australis ATCC 700641]
gi|319746430|gb|EFV98691.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Streptococcus
australis ATCC 700641]
gi|342831762|gb|EGU66072.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
australis ATCC 700641]
Length = 450
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 144/300 (48%), Gaps = 29/300 (9%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L+ G V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LEKGIPVLTEVELAYLI--SEAPIIGITGSNGKTTTTTMIGEVLTAAGQNGLLSGNIGFP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A A + V+E+SS+Q+ + + F P ++V+ NL P HL+ H + +
Sbjct: 151 ASQVAQTATAKDT-------LVMELSSFQL-MGIEAFHPEIAVITNLMPTHLDYHGSFEG 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDT---EAKTAS 198
Y K + +M +L F NQ L + + + + K+D E
Sbjct: 203 YVAAKWAIQKNMTAKDFVVLNF-NQDLAKDLS-QQTQATVVPFSTQEKVDGAYLEDGVLY 260
Query: 199 FEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHR 258
F AV ++ + V G HN N A+A ++V L G+D + + T+ HR
Sbjct: 261 FRGEAV-----MRADQIGVPGSHNVEN-ALATIAVAKLR-GIDNQTIQETLSAFGGVKHR 313
Query: 259 MQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
+Q V +I+GV + +DSK+TN+ AT L +++ GG + N F++L+
Sbjct: 314 LQYVA-EIEGVKFYNDSKSTNILATQKALSGFDNANVILIAGGLDR------GNEFDELV 366
>gi|404378086|ref|ZP_10983185.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Simonsiella
muelleri ATCC 29453]
gi|294483950|gb|EFG31633.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Simonsiella
muelleri ATCC 29453]
Length = 443
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 140/283 (49%), Gaps = 18/283 (6%)
Query: 23 QSGKRVMSELDFAAQVIP-RSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
+ G +V+ ++ A ++ +S KI+A+TG+NGK+T + VG + G++ V GN+G P
Sbjct: 87 ERGGKVIGDVAILADLLKNQSDKIIAITGSNGKTTTTSLVGYLCEQSGLDTVVAGNIGMP 146
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
+ EA L V V+E+SS+Q+E + Y + LN++ DHL+R+ + +
Sbjct: 147 VLEA-----WLVRGGKSADVWVLELSSFQLETTD-YLDADAATCLNISEDHLDRYDDLLD 200
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEV 201
YA TK +F N K + + A+K + + + ++ + S +
Sbjct: 201 YARTKDMIF----NGKAIQVLNADDAFCCAMKRENRPIHYFSLSQSIDYYLDSVSGSLKH 256
Query: 202 PAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQI 261
++ Q ++ + G HN N +AAL+ L +G+ L I + + PHR++
Sbjct: 257 QGADLMPQT---DIPLQGSHNVAN-VLAALA-LCESVGLARADLLKYIRVFKGLPHRVEK 311
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
V GV ++DDSK TN+ AT ++ L K ++ GG K
Sbjct: 312 VGEK-NGVIFIDDSKGTNVGATVAAIVGLP-EKIWLIAGGMGK 352
>gi|317132325|ref|YP_004091639.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Ethanoligenens
harbinense YUAN-3]
gi|315470304|gb|ADU26908.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Ethanoligenens
harbinense YUAN-3]
Length = 458
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 134/285 (47%), Gaps = 24/285 (8%)
Query: 25 GKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSE 84
G V SE++ +V P +I+AVTG++GK+T T + ++L G +GGN+G PL
Sbjct: 96 GVAVTSEMEVFFEVCP--CRIIAVTGSDGKTTTTTLISEILKREGRRVHLGGNIGRPL-- 151
Query: 85 AAFHCIALPSSKP--KFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNY 142
LP + + VAVVE+SS+Q+ + P V+V+ N+TP+HL+ HK M Y
Sbjct: 152 -------LPEIETIREDDVAVVELSSFQLISMRR--SPDVAVITNITPNHLDMHKDMVEY 202
Query: 143 ALTKCHLFSHMVNTKLGLLPFGNQ---HLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASF 199
K H+F H +L F N + E ++G + + P T+A +
Sbjct: 203 IQAKKHIFLHQNGCSKTVLNFDNAITVPMAEEVRGQCLGFS-LKEPPRFGCYTDADGVIW 261
Query: 200 EVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRM 259
+ + ++ + G HN N AA +V GL E + HR+
Sbjct: 262 FLSGEQKHYVMHRDDILLPGSHNVENYMAAAAAVWGL---AKPETILGVARSFTGVEHRI 318
Query: 260 QIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
++V R++ GV + +DS AT T GL K +++ GG K
Sbjct: 319 ELV-RELDGVRYYNDSIATTPSRTLAGLRAFS-QKVILIAGGYDK 361
>gi|401684020|ref|ZP_10815903.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
sp. BS35b]
gi|418974839|ref|ZP_13522748.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
oralis SK1074]
gi|383348210|gb|EID26169.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
oralis SK1074]
gi|400186325|gb|EJO20537.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
sp. BS35b]
Length = 450
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 145/297 (48%), Gaps = 23/297 (7%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L G V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LAKGIPVLTEVELAYLI--SEAPIIGITGSNGKTTTTTMIGEVLTAAGQHGLLSGNIGYP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A A + V+E+SS+Q+ + + F P ++V+ NL P H++ H + +
Sbjct: 151 ASKVAQTATAKDT-------LVMELSSFQL-MGVQEFHPEIAVITNLMPTHIDYHGSFEA 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEV 201
Y K ++ + M +L F NQ L + + A + F + A A ++
Sbjct: 203 YVAAKWNIQNKMTAVDFLVLNF-NQDLAKELATK--TQATVVPFSTKEKVDGAYLADGQL 259
Query: 202 PAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQI 261
G V + + V G HN N A+A ++V L GVD + + T+ HR+Q
Sbjct: 260 YFRGEVV-MAASEIGVPGSHNVEN-ALATIAVAKLR-GVDNQTIKETLSAFGGVKHRLQF 316
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
V +I+GV + +DSK+TN+ AT L K +++ GG + N F++L+
Sbjct: 317 VD-EIKGVKFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------GNEFDELV 366
>gi|387761547|ref|YP_006068524.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
salivarius 57.I]
gi|339292314|gb|AEJ53661.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
salivarius 57.I]
Length = 450
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 143/308 (46%), Gaps = 37/308 (12%)
Query: 18 LACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGN 77
+A L+ G V +E++ A V I+ +TG+NGK+T T + +LNH G + GN
Sbjct: 89 VARALEKGIPVWTEVELAYLV--SEAPIIGITGSNGKTTTTTMIADVLNHGGKSGVLSGN 146
Query: 78 LGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK 137
+G P SE A A + V+E+SS+Q+ + F P ++V+ NL P H++ H
Sbjct: 147 IGFPASEVAQSVTAQDT-------LVMELSSFQL-MGIDSFHPHIAVITNLMPTHIDYHG 198
Query: 138 TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGV-KIDTEAKT 196
+ + Y K ++ + M +L F NQ L + + + F V K+D
Sbjct: 199 SFEEYVAAKWNIQNQMTADDFVVLNF-NQDLAKELATQ--TKTQVVPFSTVEKVD----G 251
Query: 197 ASFEVPAVGVVSQL--QLHNMKVMGRHNYHNA----AVAALSVLGLDIGVDVEALNSTIE 250
A E + +L Q + V G HN NA AVA LS G+ +A+ T+
Sbjct: 252 AYLENGGLYFKGELVMQADEIGVPGSHNVENALATIAVAKLS------GISNQAIKETLA 305
Query: 251 ILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQE 310
HR+Q V I V + +DSK+TN+ AT L K +++ GG +
Sbjct: 306 SFGGVKHRLQFVDT-INEVRFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------ 358
Query: 311 SNGFEKLI 318
N F++LI
Sbjct: 359 GNEFDELI 366
>gi|421145296|ref|ZP_15605180.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Fusobacterium
nucleatum subsp. fusiforme ATCC 51190]
gi|395488305|gb|EJG09176.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Fusobacterium
nucleatum subsp. fusiforme ATCC 51190]
Length = 432
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 141/308 (45%), Gaps = 33/308 (10%)
Query: 9 LEFQLKATGLAC------LLQSGKRVMSELDFAAQVIPRS---IKILAVTGTNGKSTVVT 59
+EF +K+ G+ + + G +++ E++ A + KI+A+TGTNGKST
Sbjct: 48 IEFFIKSPGIPYNNFVKEVQKRGIKILDEIEIAYNYMIEKGMKTKIIAITGTNGKSTTTA 107
Query: 60 FVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQME-IPNKYF 118
+ MLN+ G +A GN+G LSE + +E+SS+Q+E I N F
Sbjct: 108 KISDMLNYAGYKAAYAGNIGRSLSEVLL-------KEKDLDFISLELSSFQLENIEN--F 158
Query: 119 CPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFN 178
P +S+++N+ PDH+ER+K+ Y TK ++ + + + + + K +
Sbjct: 159 KPYISMIINMGPDHIERYKSFDEYYNTKFNITKNQTEDLYFIENIDDVEIEKRAKQIKAK 218
Query: 179 LAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNA--AVAALSVLGL 236
+ F I + + ++ V +L L G HN N VA +L
Sbjct: 219 RISVSKFKKADIFVKNDKICYGENSIIDVDKLSLK-----GIHNLENTLFMVATAEIL-- 271
Query: 237 DIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCV 296
+D E L + I HR ++ + V +++DSKATN+++T + K +
Sbjct: 272 --KIDREKLKEFLMIATPLEHRTELFF-NYGKVKFINDSKATNVDSTKFAIQANKN--SI 326
Query: 297 ILLGGQAK 304
++ GG K
Sbjct: 327 LICGGYDK 334
>gi|147678198|ref|YP_001212413.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Pelotomaculum
thermopropionicum SI]
gi|189082913|sp|A5D147.1|MURD_PELTS RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|146274295|dbj|BAF60044.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Pelotomaculum
thermopropionicum SI]
Length = 455
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 141/291 (48%), Gaps = 29/291 (9%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
++ G V EL+ A RS I+AVTGTNGK+T T +G++ G+ VGGN+G+P
Sbjct: 91 VREGIPVTGELELA-YYFTRS-PIVAVTGTNGKTTTTTLIGEIFKDAGMNTLVGGNIGSP 148
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
L IA V V EVSS+Q+E + F P V VVLN+TPDHL+RH TM N
Sbjct: 149 L-------IAEVERYGPDDVIVAEVSSFQLETAST-FRPKVGVVLNITPDHLDRHGTMGN 200
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEV 201
YA TK +F++ +L + G R + + E K + V
Sbjct: 201 YAATKARMFANQGPGDFAVLNCDDPLAASLKAGVRSRVIFFSR------RKELKEGVW-V 253
Query: 202 PAVGVVSQLQLHN--------MKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILR 253
+V+ L H + + G HN NA A + + G++ +L T+ +
Sbjct: 254 SGGMIVASLNGHREVVCRSDELGLPGAHNLENALAAVAAAKAM--GIESNSLAGTLRRFK 311
Query: 254 TPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
HR++ V ++ GV +++DSK TN +A L + G V++ GG+ K
Sbjct: 312 GVAHRLEFVA-EVDGVRYINDSKGTNPDAAIKAL-ESYGEPIVLIAGGKNK 360
>gi|427428874|ref|ZP_18918912.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Caenispirillum
salinarum AK4]
gi|425881301|gb|EKV29990.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Caenispirillum
salinarum AK4]
Length = 469
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/275 (31%), Positives = 123/275 (44%), Gaps = 39/275 (14%)
Query: 46 LAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVE 105
+A+TGTNGKST +G +L G VGGNLG P+ E A P V+E
Sbjct: 112 VAITGTNGKSTTTALIGHILACAGHRVEVGGNLGTPVLELA--------PLPFHGTYVLE 163
Query: 106 VSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFGN 165
+SSYQ+E+ P V+++LN+TPDHL RH M Y K +F++ + ++ +
Sbjct: 164 MSSYQLEL-TPSLSPDVALLLNITPDHLARHGGMDGYVAAKERIFANQWQPAVAVIGQDD 222
Query: 166 QHLNEAIK--GHRFNLAWIGAFPGVKIDTEAKTASFEVPAV--------GVVSQLQLHNM 215
+H + H N I V+ D E F + V G L +
Sbjct: 223 KHCRAMTRRVAHACNADVI----PVRADGEEPGGIFTLDGVLFDATERGGPREVCDLRTI 278
Query: 216 KVM-GRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDD 274
+ G HN+ NA A + GV + + + + HR + V I GV +V+D
Sbjct: 279 PALPGAHNWQNACAAYAAC--RARGVHPQTIVAAMRTFPGLAHRQETVAM-IDGVRFVND 335
Query: 275 SKATNLEA-----TCTGLMDLKGHKCVILLGGQAK 304
SKATN EA TC G + + GGQAK
Sbjct: 336 SKATNAEAAEKALTCYGAV-------YWIAGGQAK 363
>gi|306825643|ref|ZP_07458982.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Streptococcus
sp. oral taxon 071 str. 73H25AP]
gi|304432004|gb|EFM34981.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Streptococcus
sp. oral taxon 071 str. 73H25AP]
Length = 450
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 145/300 (48%), Gaps = 29/300 (9%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L G V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LAKGIPVLTEVELAYLI--SEAPIIGITGSNGKTTTTTMIGEVLTAAGQHGLLSGNIGYP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A A + V+E+SS+Q+ + + F P ++V+ NL P H++ H + +
Sbjct: 151 ASQVAQTATAKDT-------LVMELSSFQL-MGVQEFHPEIAVITNLMPTHIDYHGSFEA 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDT---EAKTAS 198
Y K ++ ++M +L F NQ L + + + + K+D E
Sbjct: 203 YVAAKWNIQNNMAAADFLVLNF-NQDLAKEL-ATKTQATVVPFSTKEKVDGAYLENGQLY 260
Query: 199 FEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHR 258
F V S++ V G HN N A+A ++V L GVD + + T+ HR
Sbjct: 261 FRGEVVMAASEI-----GVPGSHNVEN-ALATIAVAKLR-GVDNQIIKETLSAFGGVKHR 313
Query: 259 MQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
+Q V +I+GV + +DSK+TN+ AT L K +++ GG + N F++L+
Sbjct: 314 LQFVD-EIKGVKFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------GNEFDELV 366
>gi|104783455|ref|YP_609953.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Pseudomonas
entomophila L48]
gi|95112442|emb|CAK17169.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Pseudomonas
entomophila L48]
Length = 448
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 139/297 (46%), Gaps = 44/297 (14%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+A++G+N KSTV T VG+M G VGGNLG P AL ++ V+
Sbjct: 111 IIAISGSNAKSTVTTLVGEMAAQAGKRVAVGGNLGTP---------ALDLLDDSVELYVL 161
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSH----MVNTKLGL 160
E+SS+Q+E ++ V+ VLN++ DH++R+ + Y L K +F +VN + L
Sbjct: 162 ELSSFQLETTDQ-LNAEVATVLNISEDHMDRYSGLPAYHLAKHRIFRGARQVVVNRQDAL 220
Query: 161 ---LPF-GNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMK 216
LP G + + F AF ++D E K +FE + + + +K
Sbjct: 221 SRPLPVEGRPSWSFGLNAPDFK-----AFGLREVDGE-KHLAFEFQTL-----MPVRELK 269
Query: 217 VMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSK 276
+ G HN NA A G+ E + + + HR Q V R+ GV W DDSK
Sbjct: 270 IRGAHNQSNALAALALGHA--AGLPFEPMLEALREFKGLAHRCQWV-RERNGVNWYDDSK 326
Query: 277 ATNLEATCTGL----MDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPLNHH-RCVI 328
ATN+ A + D++G K V++ GG K + F L EP+ H R V+
Sbjct: 327 ATNVGAALAAIEGLGADIEG-KLVLIAGGDGKGAD------FAALREPVAQHCRAVV 376
>gi|298387941|ref|ZP_06997490.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Bacteroides sp.
1_1_14]
gi|383125035|ref|ZP_09945694.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides sp.
1_1_6]
gi|62900586|sp|Q8A256.2|MURD_BACTN RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|251840813|gb|EES68894.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides sp.
1_1_6]
gi|298259348|gb|EFI02223.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Bacteroides sp.
1_1_14]
Length = 444
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 148/308 (48%), Gaps = 36/308 (11%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
L G V+SE++FA + K++ +TG+NGK+T + + + + + GN+G
Sbjct: 82 LKAQGTPVISEIEFAGRYT--DAKMICITGSNGKTTTTSLIYHIFKSADLNVGLAGNIGK 139
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDHLERHK-T 138
L AL ++ ++E+SS+Q++ N Y F ++V++N+TPDHL+R+
Sbjct: 140 SL--------ALQVAEEHHDYYIIELSSFQLD--NMYNFRANIAVLMNITPDHLDRYDHC 189
Query: 139 MKNYALTKCHLFSHMVNTKLGLL----PFGNQHL-NEAIKGHRFNLAWI---GAFPGVKI 190
M+NY K + + + P Q L +K H + A + GA V+
Sbjct: 190 MQNYIDAKFRITQNQTTDDAFIFWNDDPIIKQELAKHGLKAHLYPFAAVKEDGAIAYVE- 248
Query: 191 DTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIE 250
D E K + ++ + + G+HN +N+ A +S L G+ E + +
Sbjct: 249 DHEVKITE------PIAFNMEQEELALTGQHNLYNSLAAGISA-NL-AGITKENIRKALS 300
Query: 251 ILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQE 310
+ HR++ V R ++G+ +++DSKATN+ + L + K V++LGG+ K G +
Sbjct: 301 DFKGVEHRLEKVAR-VRGIDFINDSKATNVNSCWYALQSMTT-KTVLILGGKDK---GND 355
Query: 311 SNGFEKLI 318
E L+
Sbjct: 356 YTEIEDLV 363
>gi|167614184|gb|ABZ89690.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Buchnera
aphidicola]
Length = 440
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 131/270 (48%), Gaps = 30/270 (11%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+++TGTNGKSTV T V ++ G + F+GGN+G P+ E K + ++
Sbjct: 108 IISITGTNGKSTVATMVKKIAEKSGYKVFLGGNIGFPVLEML---------NQKANLYIL 158
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERH-KTMKNYALTKCHLFSH-----MVNTKL 158
E+SS+Q+E ++VVLN+T DHL+R+ + + Y K +++ + K
Sbjct: 159 ELSSFQLETTFS-LKSKIAVVLNITEDHLDRYPEGFEQYKKIKLSIYNQAEICLIKLKKG 217
Query: 159 GLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVM 218
G PF Q ++ I I+ E + A V L NM +
Sbjct: 218 GKKPFDTQF-------KKYISFGICQNNNYHINYEKEKAILYCKNKKV---LDTSNMFLN 267
Query: 219 GRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKAT 278
G HNY NA ++ + ++ A+N T++ PHR Q VH + ++W++DSK+T
Sbjct: 268 GYHNYENALISLAISDAMKFNREI-AIN-TLKQFSGLPHRFQTVHIN-NNISWINDSKST 324
Query: 279 NLEATCTGLMDLKGHKCV-ILLGGQAKVLN 307
N+++T L +L + +LLGG K N
Sbjct: 325 NVDSTKVALQNLNIKGTIWLLLGGDGKSSN 354
>gi|383640288|ref|ZP_09952694.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Sphingomonas
elodea ATCC 31461]
Length = 379
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/268 (30%), Positives = 126/268 (47%), Gaps = 42/268 (15%)
Query: 44 KILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAV 103
+++ +TGTNGKST + ++ GI +GGN+G P I P+ V V
Sbjct: 59 RVVGITGTNGKSTTTALIHHIIETAGIPTRLGGNIGLP--------ILGQEPLPEGGVYV 110
Query: 104 VEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPF 163
+E+SSYQ+++ C V+V+LN+TPDHL+R+ + YA +K LF+ ++
Sbjct: 111 LELSSYQIDLTQSLDC-DVAVLLNITPDHLDRYDGFEGYAASKARLFAMQSKGHAAIIGI 169
Query: 164 GNQ-----HLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVM 218
G+ A+ G ++ I PGV +D Q +
Sbjct: 170 GDAASATIARRVALSGRAEDVTKIA--PGVCMD-------------------QSRWPALQ 208
Query: 219 GRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQ-IVHRDIQGVTWVDDSKA 277
G HN NA A + L G+D A++ +E PHRM+ I R+ GV +V+DSKA
Sbjct: 209 GPHNAQNALAAIAACEAL--GIDRAAIDRGLESFPGLPHRMERIATRN--GVLFVNDSKA 264
Query: 278 TNLEATCTGLMDLKGHKCVILLGGQAKV 305
TN E+T L + +LGG AK
Sbjct: 265 TNPESTAPALAAYP--RIHWILGGVAKT 290
>gi|261405664|ref|YP_003241905.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Paenibacillus sp.
Y412MC10]
gi|261282127|gb|ACX64098.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Paenibacillus sp.
Y412MC10]
Length = 477
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 147/299 (49%), Gaps = 47/299 (15%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
+++E++ A ++ ++ +TG+NGK+T T+VG++L + G+ V GN+G PLSEAA
Sbjct: 99 IVTEVEIAYRLC--EAPMIGITGSNGKTTTTTWVGKLLENAGLSPIVAGNIGTPLSEAA- 155
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
++ + VVE+SS+Q++ + F P +S +LN+T HL+ H M +Y +K
Sbjct: 156 ------ATATEHDWMVVELSSFQLK-GTEAFRPRISCLLNVTETHLDYHGGMDDYVASKA 208
Query: 148 HLFSHMVNTKLGLLPFGN---QHLNEAIKGHRFNLAWIGAF-----------PGVK---- 189
LF++ + +L + + ++L IK H + + PG +
Sbjct: 209 KLFANQTSEDTAVLNWDDPVCRNLVPYIKAHIVPFSMSESLREGVHITPPYAPGAQDSDE 268
Query: 190 -------IDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDV 242
I T+ + + E+ +++ N+ + GR N NA A + + D
Sbjct: 269 DCQGRRIIYTDGEGFTHEI--------IRVENIGLPGRFNVGNAMAACAIAIAAGVAPD- 319
Query: 243 EALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGG 301
L + R HR++ V ++QGV++ ++SKATN +AT L K V++ GG
Sbjct: 320 -KLEEALSSFRGVEHRLEFV-AELQGVSYYNNSKATNSKATHMALTSFK-EPVVLIAGG 375
>gi|163854031|ref|YP_001642074.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
[Methylobacterium extorquens PA1]
gi|163665636|gb|ABY33003.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Methylobacterium
extorquens PA1]
Length = 455
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 134/278 (48%), Gaps = 30/278 (10%)
Query: 46 LAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVE 105
+A+TGTNGKST +L H G + +GGN+G A + P++ +V VVE
Sbjct: 117 VAITGTNGKSTTTALTAHLLRHAGRDVQMGGNIGT-----AILSLEPPAAT---RVHVVE 168
Query: 106 VSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFGN 165
+SS+Q+++ P V ++LNLTPDHL+RH TM+NYA+ K L + +G+
Sbjct: 169 LSSFQIDL-TPSLKPGVGILLNLTPDHLDRHGTMENYAVIKERLVAGADLAVIGVDDPYC 227
Query: 166 QHLNEAIKGHRFNL--AWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNY 223
+ E G R L G G + + + VS +Q ++G HN
Sbjct: 228 AAIAERRTGERIRLHIEGHGDAAGDYVGANGTVRGPDGAVIAEVSGIQ----ALLGDHNL 283
Query: 224 HNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEAT 283
NAA A + + L G+ + + ++ HRM+ + R I +V+DSKATN ++T
Sbjct: 284 QNAAAAVAAAIRL--GLTSTEIAAGLKSFPGLAHRMEPLRR-IGPTLFVNDSKATNADST 340
Query: 284 CTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPL 321
L+ + ++ GG+AK E IEPL
Sbjct: 341 EKALLAFRDIHWIV--GGKAK----------EGGIEPL 366
>gi|374292540|ref|YP_005039575.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Azospirillum
lipoferum 4B]
gi|357424479|emb|CBS87358.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Azospirillum
lipoferum 4B]
Length = 469
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 131/278 (47%), Gaps = 22/278 (7%)
Query: 41 RSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQ 100
R + +TGTNGKST T +G ++ G +A VGGNLG P+ F I +
Sbjct: 108 RDCAFIGITGTNGKSTTTTLIGHIMAAAGRKAAVGGNLGTPV--LTFDPIGSGGT----- 160
Query: 101 VAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGL 160
V+E+SSYQ+E+ + ++V+LN+TPDHL RH M Y K +F + +
Sbjct: 161 -CVLEMSSYQLELTHS-ITFDIAVLLNITPDHLARHGGMDGYIAAKKLIFHRQTWPRTAV 218
Query: 161 LPFGNQHLN----EAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQ-LQLHNM 215
+ ++H E + + + A V A G ++ ++L +
Sbjct: 219 IGVDDEHCRTIHAELVAAGDQRIWPVSALGPVAGGVYAADGWLVDDTDGEAARVVELSTL 278
Query: 216 -KVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDD 274
++G HN+ NAA A + G+ V A+ + + HR Q+V + GV +V+D
Sbjct: 279 PTLLGTHNWQNAAAAFAAC--KAAGLPVPAIAAAMATFPGLAHRQQLVG-EADGVRFVND 335
Query: 275 SKATNLEATCTGLMDLKGHKCVILLGGQAKV--LNGQE 310
SKATN +AT L +LGGQAK LNG E
Sbjct: 336 SKATNADATEKALATFD--PIYWILGGQAKDTGLNGLE 371
>gi|419818656|ref|ZP_14342616.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase, partial
[Streptococcus sp. GMD4S]
gi|404461517|gb|EKA07438.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase, partial
[Streptococcus sp. GMD4S]
Length = 405
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 144/300 (48%), Gaps = 29/300 (9%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L G V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LAKGIPVLTEVELAYLI--SDAPIIGITGSNGKTTTTTMIGEVLTAAGQRGLLSGNIGYP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A A + V+E+SS+Q+ + + F P ++V+ NL P H++ H + +
Sbjct: 151 ASQVAQTATAKDT-------LVMELSSFQL-MGVQEFHPEIAVITNLMPTHIDYHGSFEE 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDT---EAKTAS 198
Y K ++ + M +L F NQ L + + + + K+D E
Sbjct: 203 YVAAKWNIQNKMTAADFLVLNF-NQDLAKDL-ATKTEATVVPFSTKEKVDGAYLENGLLY 260
Query: 199 FEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHR 258
F V S++ V G HN N A+A ++V L GVD + + T+ HR
Sbjct: 261 FRGEVVMAASEI-----GVPGSHNVEN-ALATIAVAKLR-GVDNQIIKETLSAFGGVKHR 313
Query: 259 MQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
+Q V +I+GV + +DSK+TN+ AT L K +++ GG + N F++L+
Sbjct: 314 LQFVD-EIKGVKFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------GNEFDELV 366
>gi|418018054|ref|ZP_12657610.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
salivarius M18]
gi|345526903|gb|EGX30214.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
salivarius M18]
Length = 450
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 143/308 (46%), Gaps = 37/308 (12%)
Query: 18 LACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGN 77
+A L+ G V +E++ A V I+ +TG+NGK+T T + +LNH G + GN
Sbjct: 89 VARALEKGIPVWTEVELAYLV--SEAPIIGITGSNGKTTTTTMIADVLNHGGKSGVLSGN 146
Query: 78 LGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK 137
+G P SE A + V+E+SS+Q+ + F P ++V+ NL P H++ H
Sbjct: 147 IGFPASEVVQSVTAQDT-------LVMELSSFQL-MGIDSFHPHIAVITNLMPTHIDYHG 198
Query: 138 TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGV-KIDTEAKT 196
+ + Y K ++ + M +L F NQ L + + A + F V K+D
Sbjct: 199 SFEEYVAAKWNIQNQMTADDFVVLNF-NQDLAKELATQ--TKAQVVPFSTVEKVD----G 251
Query: 197 ASFEVPAVGVVSQL--QLHNMKVMGRHNYHNA----AVAALSVLGLDIGVDVEALNSTIE 250
A E + +L Q + V G HN NA AVA LS G+ +A+ T+
Sbjct: 252 AYLENGGLYFKGELVMQADEIGVPGSHNVENALATIAVAKLS------GISNQAIKETLA 305
Query: 251 ILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQE 310
HR+Q V I V + +DSK+TN+ AT L K +++ GG +
Sbjct: 306 SFGGVKHRLQFVDT-INEVRFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------ 358
Query: 311 SNGFEKLI 318
N F++LI
Sbjct: 359 GNEFDELI 366
>gi|406577612|ref|ZP_11053213.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
sp. GMD6S]
gi|404459712|gb|EKA06037.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
sp. GMD6S]
Length = 450
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 144/300 (48%), Gaps = 29/300 (9%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L G V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LAKGIPVLTEVELAYLI--SDAPIIGITGSNGKTTTTTMIGEVLTAAGQRGLLSGNIGYP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A A + V+E+SS+Q+ + + F P ++V+ NL P H++ H + +
Sbjct: 151 ASQVAQTATAKDT-------LVMELSSFQL-MGVQEFHPEIAVITNLMPTHIDYHGSFEE 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDT---EAKTAS 198
Y K ++ + M +L F NQ L + + + + K+D E
Sbjct: 203 YVAAKWNIQNKMTAADFLVLNF-NQDLAKDL-ATKTEATVVPFSTKEKVDGAYLENGLLY 260
Query: 199 FEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHR 258
F V S++ V G HN N A+A ++V L GVD + + T+ HR
Sbjct: 261 FRGEVVMAASEI-----GVPGSHNVEN-ALATIAVAKLR-GVDNQIIKETLSAFGGVKHR 313
Query: 259 MQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
+Q V +I+GV + +DSK+TN+ AT L K +++ GG + N F++L+
Sbjct: 314 LQFVD-EIKGVKFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------GNEFDELV 366
>gi|167630126|ref|YP_001680625.1| udp-n-acetylmuramoylalanine--d-glutamate ligase [Heliobacterium
modesticaldum Ice1]
gi|167592866|gb|ABZ84614.1| udp-n-acetylmuramoylalanine--d-glutamate ligase, putative
[Heliobacterium modesticaldum Ice1]
Length = 465
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/264 (32%), Positives = 130/264 (49%), Gaps = 28/264 (10%)
Query: 46 LAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVE 105
+A+TGTNGK+T + VG +L G FVGGN+G PL E A A + V E
Sbjct: 113 IAITGTNGKTTTTSLVGAILKAAGRNPFVGGNIGQPLVEEAQRLTA-------DRWVVAE 165
Query: 106 VSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFGN 165
VSS+Q+E ++ F P S++LN+TPDHL+RH M+NY K +F + + + +L + +
Sbjct: 166 VSSFQLETTDQ-FHPRASLILNITPDHLDRHGDMENYRAIKARIFRNQGSEDITVLNYDD 224
Query: 166 QHLNEAIKGHRFNLAWIGAFP----GVKIDTEAKTASFEVP----AVGVVSQLQLHNMKV 217
+ R + + G +D F P AV V +LQ+
Sbjct: 225 PLVRTLAADCRSRVLFFSRLQKMEHGAYVD--GGMIRFAGPEGDMAVAAVDRLQIK---- 278
Query: 218 MGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKA 277
G HN NA A +GL I V A + I+ + HRM+ V ++GV +V+DSK
Sbjct: 279 -GAHNVENALAACALTVGLGIAPAVVA-QAMID-FQPVEHRMEPVG-TVEGVAYVNDSKG 334
Query: 278 TNLEATCTGLMDLKGHKCVILLGG 301
TN +A+ + + VIL+ G
Sbjct: 335 TNPDASIKAIESY--DRPVILIAG 356
>gi|157825688|ref|YP_001493408.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Rickettsia
akari str. Hartford]
gi|157799646|gb|ABV74900.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Rickettsia
akari str. Hartford]
Length = 492
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 136/298 (45%), Gaps = 61/298 (20%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V+S++D + +++ +A+TGTNGKST + +LN G++ V GN+G P +A
Sbjct: 90 VISDIDLLFEK-SKNLNFIAITGTNGKSTTTALISHILNSSGLDYQVAGNIGVPALQA-- 146
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
+SK + V+E+SS+Q+++ K F ++V+LN+TPDHL+RH+ M Y K
Sbjct: 147 -----KASKDGY---VLELSSFQLDLV-KIFTAKIAVLLNITPDHLDRHQHMNGYIAAKS 197
Query: 148 HLFSHMVNTKLGLLPFGNQHLNE---------AIKGHRFNLAWI--------------GA 184
+F M ++ N + E IK F++ I
Sbjct: 198 KIFDRMDKDSYAVINIDNDYCREIFITLQQEQRIKLVPFSVTKILENCISVVDNKINDNF 257
Query: 185 FPGVKIDTEAKTASFEV------PAVGVV---SQLQLHNMKV--------------MGRH 221
F ++ + + + SF PA + +L L N V G H
Sbjct: 258 FDDIRFECQYNSESFRQNEFQGEPAERIKVCEHRLDLQNSLVSNFLNDAVPFNNNLQGTH 317
Query: 222 NYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATN 279
N N +AA + IGV+ + + +I ++ PHRMQ + I + + +DSKATN
Sbjct: 318 NDEN--IAASYAVAKIIGVEPKKILESISGFQSLPHRMQYICS-INNINFYNDSKATN 372
>gi|354603421|ref|ZP_09021419.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Alistipes
indistinctus YIT 12060]
gi|353348801|gb|EHB93068.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Alistipes
indistinctus YIT 12060]
Length = 452
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 149/322 (46%), Gaps = 34/322 (10%)
Query: 18 LACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGN 77
+ L + G V+SE++FA + S + + +TG+NGK+T T +ML + + GN
Sbjct: 79 VKALRERGIPVVSEIEFAGRYTDGS-RTICITGSNGKTTTTTLAYEMLRQADLSVGLAGN 137
Query: 78 LGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDHLERH 136
+G AL + F V+E+SS+Q++ Y F V V++N+TPDHL+R+
Sbjct: 138 IG--------QSFALEVATEYFDWYVIELSSFQLD--GMYDFRADVGVLMNITPDHLDRY 187
Query: 137 K-TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFP-GVKIDTEA 194
++NY +K + + T + + E + H N+ P GVK TE
Sbjct: 188 DHKLQNYVDSKFRILQNQRATDKFVYCADDPLTLENLGRHDRNME---VLPFGVKC-TEG 243
Query: 195 KTASFE-----VPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTI 249
AS + V G + + +K+ G HN +NA A S+ L GV E++ T+
Sbjct: 244 CAASLDGDTIRVRVDGKELSIGVDELKIKGVHNIYNAMAA--SIAALSAGVPPESICQTL 301
Query: 250 EILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQ 309
HR++ + GV +++DSKATN+++ L ++ V + GG K
Sbjct: 302 RTFTGVEHRLEPCG-EYGGVQYINDSKATNVDSVWYALDSMR-RPTVWIAGGTDK----- 354
Query: 310 ESNGFEKLIEPLNHHRCVITEC 331
N + +L PL R C
Sbjct: 355 -GNDYSRLF-PLVEGRVKTLVC 374
>gi|260591742|ref|ZP_05857200.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Prevotella
veroralis F0319]
gi|260536026|gb|EEX18643.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Prevotella
veroralis F0319]
Length = 443
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 153/306 (50%), Gaps = 30/306 (9%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
L+ G ++SE++FA + + K++ +TG+NGK+T + + + G + + GN+GN
Sbjct: 82 LMAKGTHIISEIEFAGRYT--NSKMICITGSNGKTTTTSLIYHIFKDAGYDVGLAGNIGN 139
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDHLERHK-T 138
L AL ++ ++E+SS+Q++ N Y F ++++LN+TPDHL+R+
Sbjct: 140 SL--------ALQVAEDPHAYYIIELSSFQLD--NMYNFRANIAILLNITPDHLDRYDFK 189
Query: 139 MKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTAS 198
+NYA K + + + + + + +K + + +P ++
Sbjct: 190 FENYADAKMRIIQNQTKDDSFIYWNDDPVIKKELKKYDVHAV---CYPFSELKEHGSIGY 246
Query: 199 FEVPAVGVVS----QLQLHNMKVMGRHNYHNAAVAALSVLGLDI-GVDVEALNSTIEILR 253
E + ++ ++ + GRHN +N+ A ++ +I G+ E++ ++
Sbjct: 247 IEEGQYKIEQPEPFNMEQEDLSLTGRHNIYNSLAAGIAS---NISGIKKESIRKSLSDFP 303
Query: 254 TPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNG 313
HR++ V + + GV +++DSKATN++A L ++ +++LGG+ K G + +
Sbjct: 304 GVEHRLEKVCK-VAGVQYINDSKATNVDACWYALESMRT-PTILILGGKDK---GNDYSA 358
Query: 314 FEKLIE 319
+ L++
Sbjct: 359 IKDLVK 364
>gi|398889455|ref|ZP_10643298.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Pseudomonas sp.
GM55]
gi|398189577|gb|EJM76851.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Pseudomonas sp.
GM55]
Length = 448
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 137/286 (47%), Gaps = 37/286 (12%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+A++G+N KSTV T VG+M G VGGNLG P AL ++ V+
Sbjct: 111 IVAISGSNAKSTVTTLVGEMAAAAGKRVAVGGNLGTP---------ALDLLSDDVELYVM 161
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLF----SHMVNTKLGL 160
E+SS+Q+E ++ V+ VLN++ DH++R+ + Y L K +F +VN + L
Sbjct: 162 ELSSFQLETTDQ-LNAEVATVLNISEDHMDRYSGLPAYHLAKHRIFRGAKQFVVNRQDAL 220
Query: 161 LPFGNQHLNEAIKGHRFNLAW--IGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVM 218
+ E F L AF G++ + K +FE + + + +K+
Sbjct: 221 T---RPLIGEGQPCWTFGLTKPDFKAF-GIREEDGEKYLAFEFQNL-----MPVRELKIR 271
Query: 219 GRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKAT 278
G HN NA A G +G+ +A+ S++ HR Q V RD+ GV + +DSKAT
Sbjct: 272 GAHNQSNALAALAL--GHAVGLPFDAMLSSLRTFAGLEHRCQWV-RDLDGVGYYNDSKAT 328
Query: 279 NLEATCTGLMDLKGH---KCVILLGGQAKVLNGQESNGFEKLIEPL 321
N+ A + L K V++ GG K G E F+ L +P+
Sbjct: 329 NVGAALAAIEGLGADIVGKVVLIAGGDGK---GAE---FKDLRDPV 368
>gi|29348859|ref|NP_812362.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Bacteroides
thetaiotaomicron VPI-5482]
gi|29340765|gb|AAO78556.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Bacteroides
thetaiotaomicron VPI-5482]
Length = 413
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 148/308 (48%), Gaps = 36/308 (11%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
L G V+SE++FA + K++ +TG+NGK+T + + + + + GN+G
Sbjct: 51 LKAQGTPVISEIEFAGRYT--DAKMICITGSNGKTTTTSLIYHIFKSADLNVGLAGNIGK 108
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDHLERHK-T 138
L AL ++ ++E+SS+Q++ N Y F ++V++N+TPDHL+R+
Sbjct: 109 SL--------ALQVAEEHHDYYIIELSSFQLD--NMYNFRANIAVLMNITPDHLDRYDHC 158
Query: 139 MKNYALTKCHLFSHMVNTKLGLL----PFGNQHL-NEAIKGHRFNLAWI---GAFPGVKI 190
M+NY K + + + P Q L +K H + A + GA V+
Sbjct: 159 MQNYIDAKFRITQNQTTDDAFIFWNDDPIIKQELAKHGLKAHLYPFAAVKEDGAIAYVE- 217
Query: 191 DTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIE 250
D E K + ++ + + G+HN +N+ A +S L G+ E + +
Sbjct: 218 DHEVKITE------PIAFNMEQEELALTGQHNLYNSLAAGISA-NL-AGITKENIRKALS 269
Query: 251 ILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQE 310
+ HR++ V R ++G+ +++DSKATN+ + L + K V++LGG+ K G +
Sbjct: 270 DFKGVEHRLEKVAR-VRGIDFINDSKATNVNSCWYALQSMTT-KTVLILGGKDK---GND 324
Query: 311 SNGFEKLI 318
E L+
Sbjct: 325 YTEIEDLV 332
>gi|346224875|ref|ZP_08846017.1| UDP-N-acetylmuramoylalanine--D-glutamateligase [Anaerophaga
thermohalophila DSM 12881]
Length = 450
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 146/302 (48%), Gaps = 39/302 (12%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V+SE++FA + S K++ +TG+NGK+T + ++ G++ + GN+G L+
Sbjct: 90 VISEIEFAGRY--SSAKMIGITGSNGKTTTAIWTYHLMKKGGLDVVLAGNVGTSLAR--- 144
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK-TMKNYALTK 146
L P F V+E+SS+Q+E + C T +V+ N+TPDHL+R+ +NYA K
Sbjct: 145 ---QLLKGDPGF--FVIELSSFQLEGMYDFKCNT-AVITNITPDHLDRYDHRFENYADAK 198
Query: 147 CHLFSHMVNTKLGLLPFGNQHLNEAIK-----GHRFNLAWIGAF-PGVKIDTEAKTAS-- 198
+ ++ + + ++ + +K GHR A+ + G +D + +
Sbjct: 199 FRILNNHDEDSVFVFNAHDKEIMTRLKKMKYPGHRCPFAYDNIYGEGACLDKDKIVVNTP 258
Query: 199 ---FEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTP 255
F P VS+L L G+HN NA A L+ L G VEA+ +
Sbjct: 259 RQHFTFP----VSELAL-----AGKHNLSNAMAATLAALS--AGTPVEAVKEGLSDFSGV 307
Query: 256 PHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFE 315
HR++ V ++ G +++DSKATN +A L ++ + + GG K G + + E
Sbjct: 308 EHRLENVE-EVNGALYINDSKATNTDAAWFALESME-RPVIWIAGGTDK---GNDYSSLE 362
Query: 316 KL 317
+L
Sbjct: 363 EL 364
>gi|289168282|ref|YP_003446551.1| MurD D-glutamic acid adding enzyme [Streptococcus mitis B6]
gi|288907849|emb|CBJ22689.1| MurD D-glutamic acid adding enzyme [Streptococcus mitis B6]
Length = 450
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 144/297 (48%), Gaps = 23/297 (7%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L G V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LAKGIPVLTEVELAYLI--SEAPIVGITGSNGKTTTTTMIGEVLTAAGQHGLLSGNIGYP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A + V+E+SS+Q+ + + F P ++V+ NL P H++ H + +
Sbjct: 151 ASQVA-------QTATDKDTLVMELSSFQL-MGVQEFHPEIAVITNLMPTHIDYHGSFEE 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEV 201
Y K ++ + M +L F NQ L + + R A + F + A ++
Sbjct: 203 YVAAKWNIQNKMTAADFLVLNF-NQDLAKELA--RKTQATVVPFSTQEKVDGAYLEDGQL 259
Query: 202 PAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQI 261
G V + + + V G HN N A+A + V L GVD + + T+ HR+Q
Sbjct: 260 YFRGEVV-MAANEIGVPGSHNVEN-ALATIVVAKLR-GVDNQTIKETLSAFGGVKHRLQF 316
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
V +I+GV + +DSK+TN+ AT L K +++ GG + N F++L+
Sbjct: 317 VD-EIKGVKFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------GNEFDELV 366
>gi|417847292|ref|ZP_12493260.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
mitis SK1073]
gi|339456940|gb|EGP69521.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
mitis SK1073]
Length = 450
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 146/297 (49%), Gaps = 23/297 (7%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L G V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LAKGIPVLTEVELAYLI--SEAPIIGITGSNGKTTTTTMIGEVLTAAGQHGLLSGNIGYP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A S K V+E+SS+Q+ + + F P ++V+ NL P H++ H + +
Sbjct: 151 ASQVAQTA----SDKDTL---VMELSSFQL-MGVQEFHPEIAVITNLMPTHIDYHGSFEE 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEV 201
Y K ++ + M +L F NQ L + + A + F ++ A ++
Sbjct: 203 YVAAKWNIQNKMTVADFLVLNF-NQDLAKELATK--TQATVVPFSTLEKVDGAYLEDGQL 259
Query: 202 PAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQI 261
G V + + + V G HN N A+A ++V L GVD + + T+ HR+Q
Sbjct: 260 YFRGEVV-MAANEIGVPGSHNVEN-ALATIAVAKLR-GVDNQTIKETLSAFGGVKHRLQF 316
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
V +I+G+ + +DSK+TN+ AT L K V++ GG + N F++L+
Sbjct: 317 VD-EIKGIKFYNDSKSTNILATQKALSGFDNSKVVLIAGGLDR------GNEFDELV 366
>gi|218532974|ref|YP_002423790.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
[Methylobacterium extorquens CM4]
gi|218525277|gb|ACK85862.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Methylobacterium
extorquens CM4]
Length = 455
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 133/278 (47%), Gaps = 30/278 (10%)
Query: 46 LAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVE 105
+A+TGTNGKST +L H G + +GGN+G A + P++ +V VVE
Sbjct: 117 VAITGTNGKSTTTALTAHLLRHAGRDVQMGGNIGT-----AILSLEPPAAT---RVHVVE 168
Query: 106 VSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFGN 165
+SS+Q+++ P V ++LNLTPDHL+RH TM+NYA K L + +G+
Sbjct: 169 LSSFQIDL-TPSLKPGVGILLNLTPDHLDRHGTMENYAAIKERLVAGADLAVIGVDDPYC 227
Query: 166 QHLNEAIKGHRFNL--AWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNY 223
+ E G R L G G + + + VS +Q ++G HN
Sbjct: 228 AAIAERRTGERIRLHIEGHGDAAGDYVGANGTVRGPDGAVIAEVSGIQ----ALLGDHNL 283
Query: 224 HNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEAT 283
NAA A + + L G+ + + ++ HRM+ + R I +V+DSKATN ++T
Sbjct: 284 QNAAAAVAAAIRL--GLSSAEIAAGLKSFPGLAHRMEPLRR-IGPTLFVNDSKATNADST 340
Query: 284 CTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPL 321
L+ + ++ GG+AK E IEPL
Sbjct: 341 EKALLAFRDIHWIV--GGKAK----------EGGIEPL 366
>gi|388470745|ref|ZP_10144954.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Pseudomonas
synxantha BG33R]
gi|388007442|gb|EIK68708.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Pseudomonas
synxantha BG33R]
Length = 448
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/295 (30%), Positives = 141/295 (47%), Gaps = 40/295 (13%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+A++G+N KSTV T VG+M G VGGNLG P AL ++ V+
Sbjct: 111 IVAISGSNAKSTVTTLVGEMAAAAGKRVAVGGNLGVP---------ALDLLSDDVELYVM 161
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLF----SHMVNTKLGL 160
E+SS+Q+E + V+ VLN++ DH++R+ + Y L K +F +VN + L
Sbjct: 162 ELSSFQLETTHD-LGAEVATVLNVSEDHMDRYSGLPAYHLAKHRIFRGARQFVVNRQDAL 220
Query: 161 LPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTE--AKTASFEVPAVGVVSQLQLHNMKVM 218
+ E + F L F G I E K +FE + + + +K+
Sbjct: 221 ---SRPLMGEGMPCWTFGLGKPD-FKGFGIREENGEKYLAFEFQNL-----MPVRELKIR 271
Query: 219 GRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKAT 278
G HN NA A LG +G+ +A+ +++ HR Q V RD+ GV++ +DSKAT
Sbjct: 272 GAHNQSNALAA--LALGHAVGLPFDAMLASLRTFAGLEHRCQWV-RDLNGVSYYNDSKAT 328
Query: 279 NLEATCTGL----MDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPLNHH-RCVI 328
N+ A + D+ G K V++ GG K + F+ L P+ H R V+
Sbjct: 329 NVGAALAAIEGLGADIDG-KLVLIAGGDGKGAD------FKDLANPVAAHCRAVV 376
>gi|336397531|ref|ZP_08578331.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Prevotella
multisaccharivorax DSM 17128]
gi|336067267|gb|EGN55901.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Prevotella
multisaccharivorax DSM 17128]
Length = 470
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 147/290 (50%), Gaps = 25/290 (8%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
L++ G ++SE++FA + K++ +TG+NGK+T + + + G +A + GN+G
Sbjct: 109 LIKQGTHIISEIEFAGRYTHS--KMICITGSNGKTTTTSLIYHIFKKAGYDAGLAGNIGR 166
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDHLERHK-T 138
L AL ++ + ++E+SS+Q++ N Y F ++++LN+TPDHL+R+
Sbjct: 167 SL--------ALQVAENPHEYYIIELSSFQLD--NMYDFRANIAILLNITPDHLDRYDFK 216
Query: 139 MKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTAS 198
+NYA K + + T+ F N + +F++ + P +I +A A
Sbjct: 217 FENYADAKLRITQNQ--TEDDSFIFWNDDPVIKKEMEKFDIKAVRC-PFSEIKEDASVAY 273
Query: 199 FEVPAVGVVS----QLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRT 254
E + ++ + + G+HN +N+ A L+ I D+ + ++
Sbjct: 274 IEEGEYKLEYPTPFNMEQETLSLTGKHNLYNSLAAGLAANISGIKKDI--IRKSLSDFPG 331
Query: 255 PPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
HR++ V + + GV +++DSKATN++A C ++ +++LGG+ K
Sbjct: 332 VEHRLEKVCK-VGGVQYINDSKATNVDA-CWYALESMTTPTILILGGKDK 379
>gi|398798933|ref|ZP_10558229.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Pantoea sp. GM01]
gi|398099531|gb|EJL89788.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Pantoea sp. GM01]
Length = 438
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 133/283 (46%), Gaps = 63/283 (22%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+A+TG+NGKSTV T VG+M G + VGGN+G P AL K Q+ V+
Sbjct: 107 IVAITGSNGKSTVTTLVGEMARAAGWQVGVGGNIGLP---------ALTLLKSPAQLYVL 157
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK-TMKNYALTKCHLFSH----MVNTKLG 159
E+SS+Q+E + + +LNLT DH++R+ M+ Y K ++ + +VN G
Sbjct: 158 ELSSFQLETTHS-LKAAAATILNLTEDHMDRYPLGMQQYRAAKLRIYENASVCVVNADDG 216
Query: 160 L---------------LPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAV 204
+ + G+ HLN+ + W+ A G K+
Sbjct: 217 MTMPVRGVDQRCVSFGINLGDYHLNQ-----QQGSTWLRA-KGEKV-------------- 256
Query: 205 GVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDI--GVDVEALNSTIEILRTPPHRMQIV 262
L M ++G+HNY NA A ++I ++AL + + HR Q+V
Sbjct: 257 -----LNTDEMTLVGQHNYTNALAALALADAVNIPRASSLKALTTFTGL----AHRFQLV 307
Query: 263 HRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCV-ILLGGQAK 304
H + GV W++DSKATN+ +T L L+ + +LLGG K
Sbjct: 308 H-EANGVRWINDSKATNVGSTEAALNGLQVKGTLWLLLGGDGK 349
>gi|340347383|ref|ZP_08670492.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Prevotella
dentalis DSM 3688]
gi|433651150|ref|YP_007277529.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Prevotella
dentalis DSM 3688]
gi|339609475|gb|EGQ14347.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Prevotella
dentalis DSM 3688]
gi|433301683|gb|AGB27499.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Prevotella
dentalis DSM 3688]
Length = 443
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 158/318 (49%), Gaps = 42/318 (13%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
L+ G ++SE++FA + K++ +TG+NGK+T + + + G +A + GN+G
Sbjct: 82 LMAQGTHIISEIEFAGRYT--HAKMICITGSNGKTTTTSLIYHIFKAAGYDAGLAGNIG- 138
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDHLERHK-T 138
H +AL ++ + ++E+SS+Q++ N Y F ++++LN+TPDHL+R+
Sbjct: 139 -------HSLALQVAEEPHEYYIIELSSFQLD--NMYNFRSNIAILLNITPDHLDRYDFK 189
Query: 139 MKNYALTKCHLFSHMVNTKLGLL----PFGNQHLNE----AIKGHRFNLAWIGAFPGVKI 190
+NY K + + + P Q L++ A+K L G+ +
Sbjct: 190 FQNYVDAKMRILQNQTEDDSFIFWNDDPVIKQELDKYDIRAVKCPFSELKEKGSIGYM-- 247
Query: 191 DTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDI-GVDVEALNSTI 249
E E P + Q +L + G+HN +N+ A L+ +I G+ E + ++
Sbjct: 248 --EEGQYKLEFPTPFNMEQEEL---SLTGKHNIYNSLAAGLAS---NISGIKKEIIRKSL 299
Query: 250 EILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQ 309
HR++ V D+ GV +++DSKATN++A L ++ ++++GG+ K G
Sbjct: 300 SDFPGVEHRLEKVC-DVAGVHYINDSKATNVDACWYALESMRT-PTILIIGGKDK---GN 354
Query: 310 ESNGFEKLIEPLNHHRCV 327
+ + ++L++ +CV
Sbjct: 355 DYSEIQELVK----QKCV 368
>gi|418977949|ref|ZP_13525756.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
mitis SK575]
gi|383349150|gb|EID27100.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
mitis SK575]
Length = 450
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 145/301 (48%), Gaps = 31/301 (10%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L G V++E++ A + I+ +TG+NGK+T T +G +L G + GN+G P
Sbjct: 93 LAKGIPVLTEVELAYLI--SEAPIIGITGSNGKTTTTTMIGDVLTAAGQHGLLSGNIGYP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A S K V+E+SS+Q+ + + F P ++V+ NL P H++ H + +
Sbjct: 151 ASQVAQTA----SDKDTL---VMELSSFQL-MGVQEFHPEIAVITNLMPTHIDYHGSFEE 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGV-KIDT---EAKTA 197
Y K ++ + M +L F NQ L + + A + F + K+D E
Sbjct: 203 YVAAKWNIQNKMTAADFLVLNF-NQDLAKELATK--TQATVVPFSTLEKVDGAYLEDGQL 259
Query: 198 SFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPH 257
F V S++ V G HN N A+A ++V L GVD + + T+ H
Sbjct: 260 YFRGEVVMAASEI-----GVPGSHNVEN-ALATIAVAKLR-GVDNKTIKETLSAFGGVKH 312
Query: 258 RMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKL 317
R+Q V +I+GV + +DSK+TN+ AT L K +++ GG + N F++L
Sbjct: 313 RLQFVD-EIKGVKFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------GNEFDEL 365
Query: 318 I 318
+
Sbjct: 366 V 366
>gi|224368382|ref|YP_002602545.1| protein MurD [Desulfobacterium autotrophicum HRM2]
gi|223691098|gb|ACN14381.1| MurD [Desulfobacterium autotrophicum HRM2]
Length = 458
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 135/282 (47%), Gaps = 27/282 (9%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V ELD + R ++A+TGTNGK+TV T V +ML G+ F GGN+G PL E
Sbjct: 104 VTGELDLFFYFLER--PLVAITGTNGKTTVTTLVSEMLKRSGLSVFTGGNIGTPLVE--- 158
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
L S + + V V EVSS+Q++ F P V+V+LN+ DH++R+ YA +K
Sbjct: 159 ---FLESGQTE-DVVVAEVSSFQLDAAT-MFAPRVAVLLNIAEDHMDRYTAFSAYADSKW 213
Query: 148 HLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVV 207
L + + ++ NQ L R A + F + +A A+ + ++ +
Sbjct: 214 ALLGNQSENDIAVV---NQTLPIDSDRKRTIKAVLLTFG----EDKACNAAIDTRSIAIS 266
Query: 208 SQ-----LQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIV 262
+Q L L ++ G HN N +AA ++ L G + ++ HR + V
Sbjct: 267 TQDQKFVLDLSVTRLRGAHNREN--IAAAALAALLAGACQAGIQGALDDFSGLAHRTEYV 324
Query: 263 HRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
I GV + +DSK TN A L + +++LGG++K
Sbjct: 325 TA-INGVDYYNDSKGTNPHAVEGALRGF--DRVILILGGRSK 363
>gi|443242723|ref|YP_007375948.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Nonlabens
dokdonensis DSW-6]
gi|442800122|gb|AGC75927.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Nonlabens
dokdonensis DSW-6]
Length = 453
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 137/292 (46%), Gaps = 36/292 (12%)
Query: 25 GKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSE 84
G V+SE++FAA+ KI+AVTG NGK+TV + + + N +E GGN+G ++
Sbjct: 95 GIEVISEIEFAARFTDE--KIIAVTGANGKTTVTSLIDHIFNVANLEHTTGGNIGKSFAQ 152
Query: 85 AAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK-TMKNYA 143
+ + K ++EVSS+Q++ + F P ++++LN+TPDHL+R+ +NY
Sbjct: 153 QVY--------EGKSTYRLLEVSSFQLDGIST-FKPHIAILLNITPDHLDRYDYKFENYI 203
Query: 144 LTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWI----------GAF-PGVKIDT 192
+K + + + + + EAIK I GA+ +I
Sbjct: 204 ASKMRITMNQDENDFLIYNTDDPAITEAIKNANIKAQLIPFSMENELEKGAYLLNNQIHI 263
Query: 193 EAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEIL 252
+ F +P + + G+HN NA A+ + L I E + ++
Sbjct: 264 NTHNSLFTMPT---------EQLPIKGKHNTANAMAASTTAKLLQI--RKETIRQSLTSF 312
Query: 253 RTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
HR++ V + I V +++DSKATN+ AT L D V ++GG K
Sbjct: 313 EGVEHRLENVLK-INKVQYINDSKATNVNATYYAL-DSMEQPTVWIVGGVDK 362
>gi|421452176|ref|ZP_15901537.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
salivarius K12]
gi|400182607|gb|EJO16869.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
salivarius K12]
Length = 450
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 92/308 (29%), Positives = 144/308 (46%), Gaps = 37/308 (12%)
Query: 18 LACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGN 77
+A L+ G V +E++ A V I+ +TG+NGK+T T + +LNH G + GN
Sbjct: 89 VARALEKGIPVWTEVELAYLV--SEAPIIGITGSNGKTTTTTMIADVLNHGGKSGVLSGN 146
Query: 78 LGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK 137
+G P SE A S V+E+SS+Q+ + F P ++V+ NL P H++ H
Sbjct: 147 IGFPASEVA-------QSVTNQDTLVMELSSFQL-MGIDSFHPHIAVITNLMPTHIDYHG 198
Query: 138 TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGV-KIDTEAKT 196
+ + Y K ++ + M +L F NQ L + + A + F V K+D
Sbjct: 199 SFEAYVAAKWNIQNQMTVDDFVVLNF-NQDLAKELATQ--TKAQVVPFSTVEKVD----G 251
Query: 197 ASFEVPAVGVVSQL--QLHNMKVMGRHNYHNA----AVAALSVLGLDIGVDVEALNSTIE 250
A E A+ +L + + V G HN NA AVA LS G+ +A+ T+
Sbjct: 252 AYLENGALYFKGELVMRADEIGVPGSHNVENALATIAVAKLS------GISNQAIKETLA 305
Query: 251 ILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQE 310
HR+Q V I V + +DSK+TN+ AT L K +++ GG +
Sbjct: 306 SFGGVKHRLQFVDT-IDEVKFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------ 358
Query: 311 SNGFEKLI 318
N F++LI
Sbjct: 359 GNEFDELI 366
>gi|422876964|ref|ZP_16923434.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Streptococcus
sanguinis SK1056]
gi|332361772|gb|EGJ39576.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Streptococcus
sanguinis SK1056]
Length = 459
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 133/280 (47%), Gaps = 27/280 (9%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+ +TG+NGK+T T + Q+L G + GN+G P S+ A SSK V+
Sbjct: 123 IIGITGSNGKTTTTTMIAQVLTAGGQNGLLSGNIGFPASQVAQTA----SSKDTL---VM 175
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFG 164
E+SS+Q+ + + F P ++V+ NL P HL+ H +++ YA K ++ +M +L F
Sbjct: 176 ELSSFQL-MGIEAFHPQIAVITNLMPTHLDYHGSVEEYAAAKWNIQKNMTADDYLVLNFN 234
Query: 165 NQHLNEAIKGHRFNLAWIGAFPGVKIDT---EAKTASFEVPAVGVVSQLQLHNMKVMGRH 221
E + A + K+D E +F A+ +Q + V G H
Sbjct: 235 QDWAKEM--ASQTQAAVVPFSTTEKVDGAYLEGDVLTFRGEAI-----MQAAEIGVPGSH 287
Query: 222 NYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLE 281
N N A+A ++V L G+D + + + HR+Q V R + V + +DSK+TN+
Sbjct: 288 NVEN-ALATIAVAKLR-GIDNQTIKEVLSAFGGVKHRLQYVGR-VNEVAFYNDSKSTNIL 344
Query: 282 ATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPL 321
AT L K +++ GG + N F++L+ L
Sbjct: 345 ATQKALSGFDNSKVILIAGGLDR------GNEFDELVPDL 378
>gi|163751822|ref|ZP_02159038.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Shewanella
benthica KT99]
gi|161328307|gb|EDP99468.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Shewanella
benthica KT99]
Length = 449
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 146/295 (49%), Gaps = 33/295 (11%)
Query: 34 FAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALP 93
FA V S ++ +TG+NGKSTV T VG+M G+ VGGN+G P+ L
Sbjct: 100 FARAVKNSSSCVIGITGSNGKSTVTTLVGEMAKAAGLNYAVGGNIGIPV---------LD 150
Query: 94 SSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHM 153
+ + ++E+SS+Q+E + C + LN++ DH++R++ ++ Y K L+
Sbjct: 151 LLQSPIDLYILELSSFQLETTHSLNC-IAATCLNISEDHMDRYRDLEAYRQAKLSLYDQ- 208
Query: 154 VNTKLGLLPFGNQ--HLNEAIKGHRFNL-AWIGAFPGVKIDTEAKTASFEVPAVGVVSQL 210
+K L + N+ + + F L + + GVK D + + E+ +
Sbjct: 209 --SKRALFNREDSLTQPNDPMDQNSFGLTSPVNDEWGVK-DGKIVHGASEI--------V 257
Query: 211 QLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVT 270
L ++ ++G HN+ N +AA++ L G++ E++ + HR ++V +I V+
Sbjct: 258 SLDDVAIVGSHNHAN-LIAAMA-LAYHAGIEKESMIEVAKHFTGLAHRCELV-ANIDAVS 314
Query: 271 WVDDSKATNLEATCTGLMDLKGH--KCVILLGGQAKVLNGQESNGFEKLIEPLNH 323
+V+DSKATN+ AT L L H +++ GG K G + E +++ + H
Sbjct: 315 YVNDSKATNVGATVAALEGLSEHLGDIILIAGGDGK---GADFGPLEAVLDKVTH 366
>gi|375254185|ref|YP_005013352.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Tannerella
forsythia ATCC 43037]
gi|363407079|gb|AEW20765.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Tannerella
forsythia ATCC 43037]
Length = 445
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 150/312 (48%), Gaps = 45/312 (14%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
++ G ++SE++FA + ++ + +TG+NGK+T +L G++ + GN+GN
Sbjct: 84 MERGIPIISEIEFAGRYTDATM--ICITGSNGKTTTTLLTYHILKEAGLDVGLAGNVGNS 141
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDHLERHK-TM 139
L AF P + V+E+SS+Q++ N Y F ++V+LN+TPDHL+R++ M
Sbjct: 142 L---AFQVAESPHA-----YYVIELSSFQLD--NMYEFKADIAVLLNITPDHLDRYQHCM 191
Query: 140 KNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASF 199
+NY K + + + + + + ++ HR K T + +F
Sbjct: 192 QNYIDAKFRILRNQTEKDAFIYWNDDPIIRKEMERHR-----------PKATTYPFSDTF 240
Query: 200 EVPAVGVVSQLQL-------------HNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALN 246
G + + Q+ + + G HN +N A ++ LDI E +
Sbjct: 241 HPELKGYIKEKQMIIQTLNGTFTMDQEAIALRGTHNLYNTMAAGIAAKILDI--RDEKIR 298
Query: 247 STIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVL 306
+++ HR+++V R I+GV +++DSKATN+ + L + + V++LGG K
Sbjct: 299 ASLSGFPGVAHRLEMVAR-IRGVDYINDSKATNVNSCWYALQSIN-TRMVLILGGTDK-- 354
Query: 307 NGQESNGFEKLI 318
G + + E L+
Sbjct: 355 -GNDYSEIEALV 365
>gi|397904564|ref|ZP_10505469.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Caloramator
australicus RC3]
gi|397162390|emb|CCJ32803.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Caloramator
australicus RC3]
Length = 453
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 126/267 (47%), Gaps = 31/267 (11%)
Query: 44 KILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAV 103
KI +TG++GK+T T + +ML G F+GGN+G PL E + V
Sbjct: 113 KIFGITGSDGKTTTTTLIYEMLKKQGYNVFLGGNIGIPLFEKIEEI-------KEDDYVV 165
Query: 104 VEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPF 163
+E+SS+Q+ + P VSV+ NL+P+HL+ HK M+ Y +K ++F H + +L
Sbjct: 166 LELSSFQLMDFD--VSPIVSVITNLSPNHLDYHKDMEEYVNSKKNIFLHQNERGITILNK 223
Query: 164 GNQ---HLNEAIKGH-RFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHN--MKV 217
N+ + + +KG RF AF + ++ + V + H +++
Sbjct: 224 DNEITYSMRDEVKGEIRFFSMKEKAF-----------SYYDNGKLYVNDEFICHKDEVRL 272
Query: 218 MGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKA 277
+G HN N A +V G V +E + HR++ V R+I GV + +DS A
Sbjct: 273 LGMHNIENLLTAFAAVYGF---VSIENMRYVAMNFGGVAHRIEFV-REINGVKFYNDSIA 328
Query: 278 TNLEATCTGLMDLKGHKCVILLGGQAK 304
++ T GL K +++ GG K
Sbjct: 329 SSPTRTLAGLNSF-DRKVILIAGGYDK 354
>gi|307708861|ref|ZP_07645321.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
mitis SK564]
gi|307620197|gb|EFN99313.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
mitis SK564]
Length = 450
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 145/297 (48%), Gaps = 23/297 (7%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L G V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LSKGIPVLTEVELAYLI--SEAPIVGITGSNGKTTTTTMIGEVLTAAGQHGLLSGNIGYP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A S K V+E+SS+Q+ + + F P ++V+ NL P H++ H + +
Sbjct: 151 ASQVAQTA----SDKDTL---VMELSSFQL-MGVQEFHPEIAVITNLMPTHIDYHGSFEE 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEV 201
Y K ++ + M +L F NQ L + + A + F + A ++
Sbjct: 203 YVAAKWNIQNKMTAADFLVLNF-NQDLAKELASK--TQATVVPFSTQEKVDGAYLEDGQL 259
Query: 202 PAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQI 261
G V + + + V G HN N A+A ++V L GVD + + T+ HR+Q
Sbjct: 260 YFRGEVV-MAANEIGVPGSHNVEN-ALATIAVAKLR-GVDNQTIKETLSAFGGVKHRLQF 316
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
V +I+GV + +DSK+TN+ AT L K +++ GG + N F++L+
Sbjct: 317 VD-EIKGVKFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------GNEFDELV 366
>gi|322372684|ref|ZP_08047220.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
sp. C150]
gi|321277726|gb|EFX54795.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
sp. C150]
Length = 450
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 149/315 (47%), Gaps = 31/315 (9%)
Query: 18 LACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGN 77
+A L+ G V +E++ A V I+ +TG+NGK+T T + +LNH G + GN
Sbjct: 89 VARALEKGIPVWTEVELAYLV--SEAPIIGITGSNGKTTTTTMIADVLNHGGKSGVLSGN 146
Query: 78 LGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK 137
+G P SE A A + V+E+SS+Q+ + F P ++V+ NL P H++ H
Sbjct: 147 IGFPASEVAQSVTAQDT-------LVMELSSFQL-MGIDSFHPHIAVITNLMPTHIDYHG 198
Query: 138 TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGV-KIDTEAKT 196
+ + Y K ++ + M + +L F NQ L + + A + F V K+D
Sbjct: 199 SFEAYVAAKWNIQNRMTSDDFIILNF-NQDLAKELATK--TKAQVVPFSTVEKVD----G 251
Query: 197 ASFEVPAVGVVSQL--QLHNMKVMGRHNYHNA-AVAALSVLGLDIGVDVEALNSTIEILR 253
A E + +L + + V G HN NA A A+S L G+ +A+ T+
Sbjct: 252 AYLENGGLYYKGELIMKADEIGVPGSHNVENALATIAVSKLS---GISNQAIKETLASFG 308
Query: 254 TPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNG 313
HR+Q V I V + +DSK+TN+ AT L K +++ GG + N
Sbjct: 309 GVKHRLQFVDT-INDVKFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------GNE 361
Query: 314 FEKLIEPLNHHRCVI 328
F++L+ + + +I
Sbjct: 362 FDELVPDITGVKKMI 376
>gi|407363737|ref|ZP_11110269.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Pseudomonas
mandelii JR-1]
Length = 448
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 141/287 (49%), Gaps = 39/287 (13%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+A++G+N KSTV T VG+M G VGGNLG P AL ++ V+
Sbjct: 111 IVAISGSNAKSTVTTLVGEMAVAAGKRVAVGGNLGTP---------ALDLLSDDVELYVM 161
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLF----SHMVNTKLGL 160
E+SS+Q+E ++ V+ VLN++ DH++R+ + Y L K +F +VN + L
Sbjct: 162 ELSSFQLETTDQ-LNAEVATVLNVSEDHMDRYSGLPAYHLAKHRIFRGAKQFVVNRQDAL 220
Query: 161 LPFGNQHLNEAIKGHRFNLAW--IGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVM 218
+ E F L+ AF G++ + K +FE + + + +K+
Sbjct: 221 ---SRPLMGEGQPCWTFGLSKPDFKAF-GIREEDGEKYLAFEFQNL-----MPVRELKIR 271
Query: 219 GRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKAT 278
G HN NA A G +G+ +A+ S++ HR Q V R++ GV++ +DSKAT
Sbjct: 272 GAHNQSNALAALAL--GHAVGLPFDAMLSSLRTFAGLEHRCQWV-RELDGVSYYNDSKAT 328
Query: 279 NLEATCTGL----MDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPL 321
N+ A + D+ G K V++ GG K G E F+ L +P+
Sbjct: 329 NVGAALAAIEGLGADIDG-KLVLIAGGDGK---GAE---FKDLRDPV 368
>gi|224536612|ref|ZP_03677151.1| hypothetical protein BACCELL_01487 [Bacteroides cellulosilyticus
DSM 14838]
gi|423223526|ref|ZP_17209995.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides
cellulosilyticus CL02T12C19]
gi|224521703|gb|EEF90808.1| hypothetical protein BACCELL_01487 [Bacteroides cellulosilyticus
DSM 14838]
gi|392638406|gb|EIY32247.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides
cellulosilyticus CL02T12C19]
Length = 444
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 147/305 (48%), Gaps = 30/305 (9%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
L + G V+SE++FA + + K++ +TG+NGK+T + + + G+ + GN+G
Sbjct: 82 LKKQGTPVISEIEFAGRYT--NAKMICITGSNGKTTTTSLIYHIFKSAGLNVGLAGNIGK 139
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDHLERHK-T 138
L AL + + V+E+SS+Q++ N Y F ++V++N+TPDHL+R+
Sbjct: 140 SL--------ALQVATDQHDYYVIELSSFQLD--NMYKFRANIAVLMNITPDHLDRYNHC 189
Query: 139 MKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKID-----TE 193
M+NY K + + + + + + H A + F +K D E
Sbjct: 190 MQNYVDAKFRITQNQTPEDAFIFWNDDPIIKRELDKHGL-CAHLYPFSAMKEDGAIAYVE 248
Query: 194 AKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILR 253
P + ++ + + G HN +N+ A +S L G++ E + + +
Sbjct: 249 DGEVEINEP---IAFNMEQEKLALQGTHNLYNSLAAGISA-NL-AGIEKEYIRRALSDFK 303
Query: 254 TPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNG 313
HR++ V ++GV +++DSKATN+ + L +K K V++LGG+ K G +
Sbjct: 304 GVEHRLEKVAT-VRGVEFINDSKATNVNSCWYALQSMKT-KTVLILGGKDK---GNDYTE 358
Query: 314 FEKLI 318
E L+
Sbjct: 359 IEDLV 363
>gi|326791416|ref|YP_004309237.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Clostridium
lentocellum DSM 5427]
gi|326542180|gb|ADZ84039.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Clostridium
lentocellum DSM 5427]
Length = 457
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/288 (31%), Positives = 139/288 (48%), Gaps = 29/288 (10%)
Query: 23 QSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPL 82
Q GK++ E +FA+ I+A+TGTNGK+T T VG+++ +V GN+G
Sbjct: 92 QLGKKITGEFEFASWYC--KAPIIAITGTNGKTTTTTLVGEIMKKYNPSTYVVGNIGRAF 149
Query: 83 SEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNY 142
SE P+ + V EVSS+Q+E + F P +S +LN+TPDHL RH TM+NY
Sbjct: 150 SEEVLQI-------PENGIVVAEVSSFQLETADT-FHPFISALLNITPDHLNRHHTMENY 201
Query: 143 ALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHR-----FNLAWI---GAFPGVKIDTEA 194
K ++F + LL + + EA K + F+L I GA+ V+ DT
Sbjct: 202 CACKYNIFKNQPEEGYSLLNTKDHYYEEAKKQVKARCMSFSLQEIPDCGAY--VQADTLY 259
Query: 195 KTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRT 254
+ A+ ++ ++ + G HN NA A GV + + +
Sbjct: 260 ENVHGTAHAI-----CKIEDLHIKGTHNVENALAAIAMAAAF--GVPGNLIREVLTTFKG 312
Query: 255 PPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKG-HKCVILLGG 301
HR + V +GV + +DSKATN +A GL+ L +K + L+ G
Sbjct: 313 VEHRTEYVLTK-RGVDFFNDSKATNTDAAIAGLVGLSSLNKPIRLIAG 359
>gi|423301213|ref|ZP_17279237.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides
finegoldii CL09T03C10]
gi|408471814|gb|EKJ90343.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Bacteroides
finegoldii CL09T03C10]
Length = 444
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 149/308 (48%), Gaps = 36/308 (11%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
L G V+SE++FA + K++ +TG+NGK+T + + + G+ + GN+G
Sbjct: 82 LKAQGTPVISEIEFAGRYT--DAKMICITGSNGKTTTTSLIYHIFKSAGLNVGLAGNIGK 139
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDHLERHK-T 138
L AL ++ ++E+SS+Q++ N Y F ++V++N+TPDHL+R+
Sbjct: 140 SL--------ALQVAEDHHDYYIIELSSFQLD--NMYNFRANIAVLMNITPDHLDRYDHC 189
Query: 139 MKNYALTKCHLFSHMVNTKLGLL----PFGNQHL-NEAIKGHRFNLAWI---GAFPGVKI 190
M+NY K + + + P + L +K H + A + GA V+
Sbjct: 190 MQNYIDAKFRITQNQTPDDAFIFWNDDPIIKRELAKHGLKAHLYPFAAVKEDGAIAYVE- 248
Query: 191 DTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIE 250
D E K + ++ + + G+HN +N+ A +S L G+ E + +
Sbjct: 249 DHEVKINE------PIAFNMEQEELALTGQHNLYNSLAAGISA-NL-AGITKENIRKALS 300
Query: 251 ILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQE 310
+ HR++ V R ++G+ +++DSKATN+ + L + K V++LGG+ K G +
Sbjct: 301 DFKGVEHRLEKVAR-VRGIDFINDSKATNVNSCWYALQSMTT-KTVLILGGKDK---GND 355
Query: 311 SNGFEKLI 318
E L+
Sbjct: 356 YTEIEDLV 363
>gi|269960239|ref|ZP_06174614.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio harveyi
1DA3]
gi|269835046|gb|EEZ89130.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio harveyi
1DA3]
Length = 437
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 148/315 (46%), Gaps = 37/315 (11%)
Query: 18 LACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGN 77
+ ++ G V+ +++ A + + + +A+TG+NGKSTV G + G+ VGGN
Sbjct: 85 IQTIIAKGTPVVGDIELFAWAVDKPV--IAITGSNGKSTVTDLTGVLAKAAGLTVGVGGN 142
Query: 78 LGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK 137
+G P AL + + V+E+SS+Q+E + LNL+ DH++R+
Sbjct: 143 IGVP---------ALDLLEQDADLYVLELSSFQLET-TASLKLKAAAFLNLSEDHMDRYD 192
Query: 138 TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFP---GVKIDTEA 194
M +Y K +F NT+L ++ N+ E L G+ G+++D
Sbjct: 193 GMADYRQAKLRIFD---NTELAVV---NRDDRETFPETETPLVTFGSDEQAYGLEVDGN- 245
Query: 195 KTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAV--AALSVLGLDIGVDVEALNSTIEIL 252
+T + + S +K++G+HN NA V A L G+D + AL + +
Sbjct: 246 RTWLLDHGQRVIASD----ELKLVGKHNLANALVVLALLKAAGVDYHKSLNALKTYTGL- 300
Query: 253 RTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGH-KCVILLGGQAKVLNGQES 311
HR Q+V D +GV WV+DSKATN+ +T L L+ K +L+GG K G +
Sbjct: 301 ---THRCQVV-ADNRGVKWVNDSKATNIASTMAALSGLESTGKLYLLVGGVGK---GADF 353
Query: 312 NGFEKLIEPLNHHRC 326
+ + LN C
Sbjct: 354 TPLKPIFATLNLQLC 368
>gi|70732386|ref|YP_262142.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Pseudomonas
protegens Pf-5]
gi|81174950|sp|Q4K6J1.1|MURD_PSEF5 RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|68346685|gb|AAY94291.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Pseudomonas
protegens Pf-5]
Length = 448
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 135/281 (48%), Gaps = 37/281 (13%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+A++G+N KSTV T VG+M G VGGNLG P AL ++ V+
Sbjct: 111 IVAISGSNAKSTVTTLVGEMAAAAGKRVAVGGNLGTP---------ALDLLSDDVELYVM 161
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFG 164
E+SS+Q+E ++ V+ VLN++ DH++R+ + Y HL H + + F
Sbjct: 162 ELSSFQLETTDQ-LGAEVATVLNISEDHMDRYSGLPAY-----HLAKHRIFRGARQVVFN 215
Query: 165 NQH------LNEAIKGHRFNLAW--IGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMK 216
Q + E + F L+ AF G++ + K +FE + + + +K
Sbjct: 216 RQDALTRPLIGEGLPCWTFGLSKPDFKAF-GLREEDGEKYLAFEFQNL-----MPVRELK 269
Query: 217 VMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSK 276
+ G HN NA A G +G+ +A+ + + HR Q V RD+ GV + +DSK
Sbjct: 270 IRGAHNQSNALAALAL--GHAVGLPFDAMLAALRTFAGLEHRCQWV-RDLDGVAYYNDSK 326
Query: 277 ATNLEATCTGL----MDLKGHKCVILLGGQAKVLNGQESNG 313
ATN+ A + D++G K V++ GG K + ++ G
Sbjct: 327 ATNVGAALAAIEGLGADIEG-KIVLIAGGDGKGADFKDLRG 366
>gi|422824083|ref|ZP_16872271.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Streptococcus
sanguinis SK405]
gi|422825842|ref|ZP_16874021.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Streptococcus
sanguinis SK678]
gi|422853754|ref|ZP_16900418.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Streptococcus
sanguinis SK160]
gi|422856023|ref|ZP_16902681.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Streptococcus
sanguinis SK1]
gi|422860647|ref|ZP_16907291.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Streptococcus
sanguinis SK330]
gi|422865992|ref|ZP_16912617.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Streptococcus
sanguinis SK1058]
gi|324993410|gb|EGC25330.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Streptococcus
sanguinis SK405]
gi|324995278|gb|EGC27190.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Streptococcus
sanguinis SK678]
gi|325697065|gb|EGD38952.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Streptococcus
sanguinis SK160]
gi|327461684|gb|EGF08015.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Streptococcus
sanguinis SK1]
gi|327469030|gb|EGF14502.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Streptococcus
sanguinis SK330]
gi|327489537|gb|EGF21330.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Streptococcus
sanguinis SK1058]
Length = 459
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 137/282 (48%), Gaps = 31/282 (10%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+ +TG+NGK+T T + Q+L G + GN+G P S+ A SSK V+
Sbjct: 123 IIGITGSNGKTTTTTMIAQVLTAGGQNGLLSGNIGFPASQVAQTA----SSKDTL---VM 175
Query: 105 EVSSYQ-MEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPF 163
E+SS+Q M I + F P ++V+ NL P HL+ H +++ YA K ++ +M +L F
Sbjct: 176 ELSSFQLMGIED--FHPQIAVITNLMPTHLDYHGSVEEYAAAKWNIQKNMTADDYLVLNF 233
Query: 164 GNQHLNEAIKGHRFNLAWIGAFPGV-KIDT---EAKTASFEVPAVGVVSQLQLHNMKVMG 219
NQ + + H A + F K+D E +F A+ +Q + V G
Sbjct: 234 -NQDWAKEMASH--TQATVVPFSTTEKVDGAYLEGDVLTFRGEAI-----MQAAEIGVPG 285
Query: 220 RHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATN 279
HN N A+A ++V L G+D + + + HR+Q V + + V + +DSK+TN
Sbjct: 286 SHNVEN-ALATIAVAKLR-GIDNQTIKEVLSAFGGVKHRLQYVGQ-VNEVAFYNDSKSTN 342
Query: 280 LEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPL 321
+ AT L K +++ GG + N F++L+ L
Sbjct: 343 ILATQKALSGFDNSKVILIAGGLDR------GNEFDELVPDL 378
>gi|182677683|ref|YP_001831829.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Beijerinckia
indica subsp. indica ATCC 9039]
gi|182633566|gb|ACB94340.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Beijerinckia
indica subsp. indica ATCC 9039]
Length = 462
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 134/273 (49%), Gaps = 22/273 (8%)
Query: 38 VIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKP 97
+ P+S +A+TGTNGKST V + G E +GGN+G P+ +AL P
Sbjct: 110 IAPKS-PFVAITGTNGKSTTTALVAHLFQTFGYEVAIGGNIGTPI-------LALEPPSP 161
Query: 98 KFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTK 157
+V V+E SS+Q+++ P V V+LN+TPDHL+RH TM+NYA K L
Sbjct: 162 T-RVHVIECSSFQIDL-TPTLDPWVGVLLNITPDHLDRHGTMENYAAIKARLVMGADKAV 219
Query: 158 LGLLPFGNQHLNEAIKGHRFNLAWIG-AFP----GVKIDTEAKTASFEVPAVGVVSQLQL 212
+ L + E ++ ++ + P G+ +D + +V + +
Sbjct: 220 ICLDDEPCVAIAETLRQKHKPSTFVSISHPELRDGIILDGTTLVRHVDGGSVVIADLAGI 279
Query: 213 HNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWV 272
+++ GRHN NAA A ++ G +++ + +E PHR++ V R + V +V
Sbjct: 280 ASLR--GRHNGQNAAAAVAALGAH--GYNLDLVRKGLESFPGLPHRLEEVGR-LGNVLFV 334
Query: 273 DDSKATNLEATCTGLMDLKGHKCVILLGGQAKV 305
+DSKATN +A L+ + +LGG+ K
Sbjct: 335 NDSKATNADAAEKALLSFE--NIFWILGGKPKA 365
>gi|149002384|ref|ZP_01827326.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
pneumoniae SP14-BS69]
gi|182683613|ref|YP_001835360.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
pneumoniae CGSP14]
gi|237650293|ref|ZP_04524545.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
pneumoniae CCRI 1974]
gi|237821989|ref|ZP_04597834.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
pneumoniae CCRI 1974M2]
gi|418075803|ref|ZP_12713043.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA47502]
gi|418143510|ref|ZP_12780310.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA13494]
gi|419457834|ref|ZP_13997778.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA02254]
gi|421231465|ref|ZP_15688112.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae 2080076]
gi|226722948|sp|B2IN76.1|MURD_STRPS RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|147759699|gb|EDK66690.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
pneumoniae SP14-BS69]
gi|182628947|gb|ACB89895.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
pneumoniae CGSP14]
gi|353750378|gb|EHD31018.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA47502]
gi|353809251|gb|EHD89511.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA13494]
gi|379531707|gb|EHY96941.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA02254]
gi|395596564|gb|EJG56780.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae 2080076]
Length = 450
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 144/297 (48%), Gaps = 23/297 (7%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L G V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LAKGIPVLTEVELAYLI--SEAPIIGITGSNGKTTTTTMIGEVLTAAGQHGLLSGNIGYP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A S K V+E+SS+Q+ + + F P ++V+ NL P H++ H +
Sbjct: 151 ASQVAQTA----SDKDTL---VMELSSFQL-MGVQEFHPEIAVITNLMPTHIDYHGSFSE 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEV 201
Y K ++ + M +L F NQ L + + A + F ++ A ++
Sbjct: 203 YVAAKWNIQNKMTAADFLVLNF-NQDLAKDLTSK--TEATVVPFSTLEKVDGAYLEDGQL 259
Query: 202 PAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQI 261
G V + + + V G HN N A+A ++V L VD + + T+ HR+Q
Sbjct: 260 YFRGEVV-MAANEIGVPGSHNVEN-ALATIAVAKLR-DVDNQTIKETLSAFGGVKHRLQF 316
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
V DI+GV + +DSK+TN+ AT L K V++ GG + N F++L+
Sbjct: 317 VD-DIKGVKFYNDSKSTNILATQKALSGFDNSKVVLIAGGLDR------GNEFDELV 366
>gi|296133661|ref|YP_003640908.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Thermincola potens
JR]
gi|296032239|gb|ADG83007.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Thermincola potens
JR]
Length = 454
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 96/308 (31%), Positives = 147/308 (47%), Gaps = 24/308 (7%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
++SEL+ A + RS I+A+TGTNGK+T T G++ G VGGN+G PL
Sbjct: 97 LLSELELAYR-FARS-PIVAITGTNGKTTTTTLTGEIFKAAGRRVLVGGNIGLPL----- 149
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
+A + + V EVSS+Q+E ++ F P VS++LN TPDHL+RH T +NY L K
Sbjct: 150 --VAEVEKYAREDIIVAEVSSFQLECIHR-FKPKVSIILNFTPDHLDRHGTFENYILAKA 206
Query: 148 HLFSHMVNTKLGLLPFGNQHL---NEAIKGHRFNLAWIGAF-PGVKIDTEAKTASFEVPA 203
+F + +L F + + E +K + GV + + +
Sbjct: 207 RIFENQGPEDFAVLNFDDPKVAACAEQVKAQVIFFSRRHKLEKGVYVRQDRIIIDLGQGS 266
Query: 204 VGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVH 263
V S + ++ + G HN NA A + L GV+ E + + R PHRM+ V
Sbjct: 267 KDVCS---VKDIFIRGNHNLENALAATAAAATL--GVEPEVIAEVLRTFRGVPHRMEHVA 321
Query: 264 RDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPLNH 323
+I GV +++DSK TN +A L D V++ GG+ K G + F +
Sbjct: 322 -EIDGVAYINDSKGTNPDAAMKAL-DSYDQPLVLIAGGRNK---GSDFTAFAAKVREKVR 376
Query: 324 HRCVITEC 331
V+ EC
Sbjct: 377 ALVVLGEC 384
>gi|401682235|ref|ZP_10814129.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
sp. AS14]
gi|400184671|gb|EJO18909.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
sp. AS14]
Length = 450
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 134/278 (48%), Gaps = 29/278 (10%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+ +TG+NGK+T T + Q+L G + GN+G P S+ A SSK V+
Sbjct: 114 IIGITGSNGKTTTTTMIAQVLTAGGQNGLLSGNIGFPASQVAQTA----SSKDTL---VM 166
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFG 164
E+SS+Q+ + + F P ++V+ NL P HL+ H ++++YA K ++ +M +L F
Sbjct: 167 ELSSFQL-MGIEAFHPQIAVITNLMPTHLDYHGSVEDYAAAKWNIQKNMTADNYLVLNFN 225
Query: 165 NQHLNEAIKGHRFNLAWIGAFPGV-KIDT---EAKTASFEVPAVGVVSQLQLHNMKVMGR 220
E + A + F K+D E +F A+ +Q + V G
Sbjct: 226 QDWAKEMASQTQ---ATVVPFSTTEKVDGAYLEGDVLTFRGEAI-----MQAAEIGVPGS 277
Query: 221 HNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNL 280
HN N A+A ++V L G+D + + + HR+Q V R + V + +DSK+TN+
Sbjct: 278 HNVEN-ALATIAVAKLR-GIDNQTIKEVLSAFGGVKHRLQYVGR-VNEVAFYNDSKSTNI 334
Query: 281 EATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
AT L K +++ GG + N F++L+
Sbjct: 335 LATQKALSGFDNSKVILIAGGLDR------GNEFDELV 366
>gi|387773943|ref|ZP_10129225.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Haemophilus
parahaemolyticus HK385]
gi|386903435|gb|EIJ68250.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Haemophilus
parahaemolyticus HK385]
Length = 433
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 147/325 (45%), Gaps = 40/325 (12%)
Query: 11 FQLKATGLACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGI 70
F L + + +G V+ +++ + + + I+A+TG+NGKSTV T V +M GI
Sbjct: 76 FALATPEIQQAINAGVEVVGDIELFCREV--TAPIIAITGSNGKSTVTTLVTEMAKQAGI 133
Query: 71 EAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTP 130
+ +GGN+G P AL + + V+E+SS+Q+E + + VLN++
Sbjct: 134 KVGMGGNIGVP---------ALSLLNSDYALYVLELSSFQLETTSS-LKAVAATVLNVSE 183
Query: 131 DHLERHKTMKNYALTKCHLFSHMVNTKL-GLLP--FGNQHLNEAIKGHRFNLAWIGAFPG 187
DH++R+ ++ +Y K ++++ N + G P + Q + I+ N +
Sbjct: 184 DHMDRYDSLADYRAAKLKIYNNAENVIVNGEDPQTYPEQAVKNLIRFAEHNAEY------ 237
Query: 188 VKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNS 247
T V G + + M + GRHN NA A G+ E +
Sbjct: 238 --------TLRHGVLYAGETAVMGTKQMLIHGRHNEMNALAAMALA--DAAGIPREGIVK 287
Query: 248 TIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLK-GHKCVILLGGQAKVL 306
++I HR Q V + GV WV+DSKATN+ +T L L+ +LLGG K
Sbjct: 288 ALQIYGGLAHRFQAVPTN-DGVRWVNDSKATNVGSTVAALNGLEVAGTLYLLLGGDGKAA 346
Query: 307 NGQESNGFEKLIEPLNHHRCVITEC 331
+ E ++PL + ++ C
Sbjct: 347 DFSE-------LKPLINKPNIVCYC 364
>gi|417935287|ref|ZP_12578607.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
mitis bv. 2 str. F0392]
gi|340771857|gb|EGR94372.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
mitis bv. 2 str. F0392]
Length = 450
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 145/301 (48%), Gaps = 31/301 (10%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L+ G V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LEKGIPVLTEVELAYLI--SDAPIIGITGSNGKTTTTTMIGEVLTAAGQHGLLSGNIGYP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A + V+E+SS+Q+ + + F P ++V+ NL P H++ H + +
Sbjct: 151 ASQVA-------QTATDKDTLVMELSSFQL-MGVQEFHPEIAVITNLMPTHIDYHGSFEE 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGV-KIDT---EAKTA 197
Y K ++ + M +L F NQ L + + A + F + K+D E
Sbjct: 203 YVAAKWNIQNKMTAADFLVLNF-NQDLAKELATK--TQATVVPFSTLEKVDGAYLEDGQL 259
Query: 198 SFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPH 257
F V S++ V G HN N A+A ++V L G+D + + + H
Sbjct: 260 YFRGEVVMAASEI-----GVPGSHNIEN-ALATIAVAKLR-GIDNQTIKEVLSAFGGVKH 312
Query: 258 RMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKL 317
R+Q V +I+GV + +DSK+TN+ AT L K +++ GG + N F++L
Sbjct: 313 RLQFVD-EIKGVKFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------GNEFDEL 365
Query: 318 I 318
+
Sbjct: 366 V 366
>gi|421217179|ref|ZP_15674080.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae 2070335]
gi|395584665|gb|EJG45057.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae 2070335]
Length = 450
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 143/291 (49%), Gaps = 23/291 (7%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P S+ A
Sbjct: 99 VLTEVELAYLI--SEAPIIGITGSNGKTTTTTMIGEVLTAAGQHGLLSGNIGYPASQVA- 155
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
+ S K V+E+SS+Q+ + + F P ++V+ NL P H++ H + Y K
Sbjct: 156 ---QIASDKDTL---VMELSSFQL-MGVQEFHPEIAVITNLMPTHIDYHGSFSEYVADKW 208
Query: 148 HLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVV 207
++ + M +L F NQ L + + A + F ++ A ++ G V
Sbjct: 209 NIQNKMTAADFLVLNF-NQDLAKDLTSK--TEATVVPFSTLEKVDGAYLEDGQLYFRGEV 265
Query: 208 SQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQ 267
+ + + V G HN N A+A ++V L VD + + T+ HR+Q V DI+
Sbjct: 266 V-MAANEIGVPGSHNVEN-ALATIAVAKLR-DVDNQTIKETLSAFGGVKHRLQFVD-DIK 321
Query: 268 GVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
GV + +DSK+TN+ AT L K V++ GG + N F++L+
Sbjct: 322 GVKFYNDSKSTNILATQKALSGFDNSKVVLIAGGLDR------GNEFDELV 366
>gi|317472438|ref|ZP_07931762.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Anaerostipes sp.
3_2_56FAA]
gi|316900082|gb|EFV22072.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Anaerostipes sp.
3_2_56FAA]
Length = 454
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 143/282 (50%), Gaps = 16/282 (5%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
+ SG+ V SE++ A QV +I A+TGTNGK+T VG+++ + +V GN+G
Sbjct: 89 FMDSGRPVWSEIELAYQV--SRGQIAAITGTNGKTTTTALVGEIMKCFYSDVYVVGNIGT 146
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMK 140
P + +AL + + V E+SS+Q+E FCP VS VLN+TPDHL+RH T++
Sbjct: 147 P-----YTSVALDTKDE--SIIVAEISSFQLETIQD-FCPKVSAVLNITPDHLDRHGTVE 198
Query: 141 NYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFE 200
YA TK + + ++ +L + + + + + ++ K SF
Sbjct: 199 VYAKTKESIGKNQTGDQVMVLNYEDPVTRNMAERANARVVFFSLDHELEEGVYFKDGSFM 258
Query: 201 VPAVGVVSQLQLH-NMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRM 259
+ V + ++ ++G HNY N +AA++V +GV E + + + HR+
Sbjct: 259 LAENKTVQTICTEADINLLGGHNYEN-ILAAIAVSHY-MGVPAEQIRKGVSGFKGVEHRI 316
Query: 260 QIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGG 301
+ V I+ V + +DSK TN +A G+ + ++ L+GG
Sbjct: 317 EYVDT-IKDVAYYNDSKGTNTDAAIKGIKAM--NRPTFLIGG 355
>gi|225854210|ref|YP_002735722.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
pneumoniae JJA]
gi|418182294|ref|ZP_12818855.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA43380]
gi|254766060|sp|C1CD51.1|MURD_STRZJ RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|225722576|gb|ACO18429.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae JJA]
gi|353850531|gb|EHE30535.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA43380]
Length = 450
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 145/297 (48%), Gaps = 23/297 (7%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L G V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LAKGIPVLTEVELAYLI--SEAPIIGITGSNGKTTTTTMIGEVLTAAGQHGLLSGNIGYP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A + S K V+E+SS+Q+ + + F P ++V+ NL P H++ H +
Sbjct: 151 ASQVA----QIASDKDTL---VMELSSFQL-MGVQEFHPEIAVITNLMPTHIDYHGLFEE 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEV 201
Y K ++ + M +L F NQ L + + A + F ++ A ++
Sbjct: 203 YVAAKWNIQNKMTAADFLVLNF-NQDLVKDLASK--TEATVVPFSTLEKVDGAYLEDGQL 259
Query: 202 PAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQI 261
G V + + + V G HN N A+A ++V L VD + + T+ HR+Q
Sbjct: 260 YFRGEVV-MAANEIGVPGSHNVEN-ALATIAVAKLR-DVDNQTIKETLSAFGGVKHRLQF 316
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
V DI+GV + +DSK+TN+ AT L K V++ GG + N F++L+
Sbjct: 317 VD-DIKGVKFYNDSKSTNILATQKALSGFDNSKVVLIAGGLDR------GNEFDELV 366
>gi|398898348|ref|ZP_10648268.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Pseudomonas sp.
GM50]
gi|398184402|gb|EJM71855.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Pseudomonas sp.
GM50]
Length = 448
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 142/295 (48%), Gaps = 40/295 (13%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+A++G+N KSTV T VG+M G VGGNLG P AL ++ V+
Sbjct: 111 IVAISGSNAKSTVTTLVGEMAAAAGKRVAVGGNLGTP---------ALDLLSDDIELYVM 161
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLF----SHMVNTKLGL 160
E+SS+Q+E ++ V+ VLN++ DH++R+ + Y L K +F +VN + L
Sbjct: 162 ELSSFQLETTDQ-LNAEVATVLNISEDHMDRYSGLPAYHLAKHRIFRGARQFVVNRQDAL 220
Query: 161 LPFGNQHLNEAIKGHRFNL--AWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVM 218
+ E F L AF G++ + K +FE + + + +KV
Sbjct: 221 ---SRPLMGEGQPCWTFGLNKPDFKAF-GIREEDGEKYLAFEFQNL-----MPVRELKVR 271
Query: 219 GRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKAT 278
G HN NA A G +G+ +A+ S + HR Q V RD+ GV + +DSKAT
Sbjct: 272 GAHNQSNALAALAL--GHAVGLPFDAMLSALRNFAGLEHRCQWV-RDLDGVGYYNDSKAT 328
Query: 279 NLEATCTGL----MDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPLNHH-RCVI 328
N+ A + D+ G K V++ GG K G E F+ L +P+ + R VI
Sbjct: 329 NVGAALAAIEGLGADIDG-KLVLIAGGDGK---GAE---FKDLRDPVAANCRAVI 376
>gi|312863272|ref|ZP_07723510.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
vestibularis F0396]
gi|311100808|gb|EFQ59013.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
vestibularis F0396]
Length = 450
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 133/281 (47%), Gaps = 35/281 (12%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+ +TG+NGK+T T + +LNH G + GN+G P SE A S V+
Sbjct: 114 IIGITGSNGKTTTTTMIADVLNHGGKSGVLSGNIGFPASEVA-------QSVTNQDTLVM 166
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFG 164
E+SS+Q+ + + F P ++V+ NL P H++ H + + Y K ++ + M + +L F
Sbjct: 167 ELSSFQL-MGIESFHPHIAVITNLMPTHIDYHGSFEGYVAAKWNIQNKMTSDDFVILNF- 224
Query: 165 NQHLNEAIKGHRFNLAWIGAFPGV-KIDTEAKTASFEVPAVGVVSQLQLH--NMKVMGRH 221
NQ L + + A + F V K+D A E + +L +H + V G H
Sbjct: 225 NQDLAKELATQTN--AQVVPFSTVEKVD----GAYLENGGLYFKGELVMHADELGVPGSH 278
Query: 222 NYHNA----AVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKA 277
N NA AVA LS V +A+ T+ HR+Q V I V + +DSK+
Sbjct: 279 NVENALATIAVAKLS------SVSNQAIKETLSSFGGVKHRLQFVDT-IDNVKFYNDSKS 331
Query: 278 TNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
TN+ AT L K +++ GG + N F++LI
Sbjct: 332 TNILATQKALSGFDNSKVILIAGGLDR------GNEFDELI 366
>gi|39998162|ref|NP_954113.1| UDP-N-acetylmuramylalanine--D-glutamate ligase [Geobacter
sulfurreducens PCA]
gi|62900554|sp|Q748D4.1|MURD_GEOSL RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|39985108|gb|AAR36463.1| UDP-N-acetylmuramylalanine--D-glutamate ligase [Geobacter
sulfurreducens PCA]
Length = 452
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 144/292 (49%), Gaps = 25/292 (8%)
Query: 18 LACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGN 77
L ++G+ V++E++ A++ I + ++A+TGTNGK+T T G++ G FVGGN
Sbjct: 85 LQAARRAGREVITEIELASRFI--TAPLVAITGTNGKTTTTTLTGELFAGCGFRTFVGGN 142
Query: 78 LGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK 137
+GNPL I L + VVE+SS+Q+E + F PTV+V+LN+T DHL+R+
Sbjct: 143 IGNPL-------IELVETGAAVDRVVVEISSFQLEW-IRSFRPTVAVLLNITEDHLDRYA 194
Query: 138 TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTA 197
T + Y K +F + + +L ++++ I FP + +
Sbjct: 195 TYQEYIDAKARIFKNQTASDWAVL-----NVDDPIVAGLAGRTCAAVFPMSRQRELGEGI 249
Query: 198 SFEVPAV-----GVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEIL 252
+ A+ G + ++ G HN N + A L +G D + + +E
Sbjct: 250 FYRDGAIIFRHAGRQERFPTDRFRITGVHNIEN--IMASLAAALLLGCDADRALACVEAF 307
Query: 253 RTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
PHRM++V R++ GV + +DSKATN+ + L + ++ GG+ K
Sbjct: 308 GGLPHRMELV-RELNGVRYFEDSKATNVGSVEKALASF--NDITLIAGGKDK 356
>gi|422023489|ref|ZP_16369994.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Providencia
sneebia DSM 19967]
gi|414094257|gb|EKT55927.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Providencia
sneebia DSM 19967]
Length = 441
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/263 (33%), Positives = 130/263 (49%), Gaps = 25/263 (9%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+A+TG+NGKSTV T VG+M GI VGGN+G P AL Q+ V+
Sbjct: 112 IIAITGSNGKSTVTTLVGEMAKPSGISVGVGGNIGIP---------ALSLLNQGHQLYVL 162
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKT-MKNYALTKCHLFSHMVNTKLGLLPF 163
E+SS+Q+E + VLN+T DH++R+ + ++ Y K H++ + N +
Sbjct: 163 ELSSFQLETTTS-LQALAATVLNVTEDHMDRYPSGLEQYREAKLHIYDNAQNCVV----- 216
Query: 164 GNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNY 223
N + H+ + +I +F D T + A G V L + ++ + G+HNY
Sbjct: 217 -NAQDPLTLPRHKMKVPYI-SFGVNSGDYYFDTQKRVLVAKGEV-LLDVDSIHLTGQHNY 273
Query: 224 HNAAVAALSVLGLDI-GVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEA 282
NA A DI GVD A ++ HR Q+V + GV W++DSKATN+ +
Sbjct: 274 TNALAALALA---DIAGVDRSASLDVLKHYTGLEHRFQLVLFN-NGVRWINDSKATNVGS 329
Query: 283 TCTGLMDLKGHKCV-ILLGGQAK 304
T L LK + +LLGG K
Sbjct: 330 TEAALNGLKVDGVLHLLLGGDGK 352
>gi|156973219|ref|YP_001444126.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Vibrio
harveyi ATCC BAA-1116]
gi|166224769|sp|A7MXR3.1|MURD_VIBHB RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|156524813|gb|ABU69899.1| hypothetical protein VIBHAR_00900 [Vibrio harveyi ATCC BAA-1116]
Length = 437
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 148/325 (45%), Gaps = 63/325 (19%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
+L G V+ +++ A + + + +A+TG+NGKSTV G M G+ VGGN+G
Sbjct: 88 VLAKGAPVVGDIELFAWAVDKPV--IAITGSNGKSTVTDLTGVMAKAAGLTVGVGGNIGV 145
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMK 140
P AL + + V+E+SS+Q+E + LNL+ DH++R++ M
Sbjct: 146 P---------ALDLLEQDADLYVLELSSFQLE-STLSLKLKAAAFLNLSEDHMDRYEGMS 195
Query: 141 NYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASF- 199
+Y K +F N +L ++ +Q FP DTE +F
Sbjct: 196 DYRQAKLRIFD---NAELAVVNRDDQE----------------TFP----DTETPLVTFG 232
Query: 200 -EVPAVGVVSQ-------------LQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEAL 245
+ A G+ + + +K++G+HN N AL VL L DV+
Sbjct: 233 SDEQAYGLEADGNRTWLLDHGQRVIASDELKLVGKHNLAN----ALVVLALLKAADVD-Y 287
Query: 246 NSTIEILRTP---PHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGH-KCVILLGG 301
+ ++ L+T HR Q+V D +GV WV+DSKATN+ +T L L+ K +L+GG
Sbjct: 288 HKSLNALKTYTGLTHRCQVV-ADNRGVKWVNDSKATNIASTIAALSGLESTGKLYLLVGG 346
Query: 302 QAKVLNGQESNGFEKLIEPLNHHRC 326
K G + + + LN C
Sbjct: 347 VGK---GADFTPLKPIFATLNLQLC 368
>gi|15902647|ref|NP_358197.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
pneumoniae R6]
gi|116515762|ref|YP_816097.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
pneumoniae D39]
gi|419481711|ref|ZP_14021505.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA40563]
gi|421265721|ref|ZP_15716604.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae SPAR27]
gi|30316022|sp|Q8DQM2.1|MURD_STRR6 RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|122279017|sp|Q04LK1.1|MURD_STRP2 RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|15458185|gb|AAK99407.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
pneumoniae R6]
gi|116076338|gb|ABJ54058.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae D39]
gi|379581390|gb|EHZ46275.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA40563]
gi|395868457|gb|EJG79574.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae SPAR27]
Length = 450
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 143/291 (49%), Gaps = 23/291 (7%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P S+ A
Sbjct: 99 VLTEVELAYLI--SEAPIIGITGSNGKTTTTTMIGEVLTAAGQHGLLSGNIGYPASQVA- 155
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
+ S K V+E+SS+Q+ + + F P ++V+ NL P H++ H + Y K
Sbjct: 156 ---QIASDKDTL---VMELSSFQL-MGVQEFHPEIAVITNLMPTHIDYHGSFSEYVAAKW 208
Query: 148 HLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVV 207
++ + M +L F NQ L + + A + F ++ A ++ G V
Sbjct: 209 NIQNKMTAADFLVLNF-NQDLAKDLTSK--TEATVVPFSTLEKVDGAYLEDGQLYFRGEV 265
Query: 208 SQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQ 267
+ + + V G HN N A+A ++V L VD + + T+ HR+Q V DI+
Sbjct: 266 V-MAANEIGVPGSHNVEN-ALATIAVAKLR-DVDNQTIKETLSAFGGVKHRLQFVD-DIK 321
Query: 268 GVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
GV + +DSK+TN+ AT L K V++ GG + N F++L+
Sbjct: 322 GVKFYNDSKSTNILATQKALSGFDNSKVVLIAGGLDR------GNEFDELV 366
>gi|359398445|ref|ZP_09191464.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Novosphingobium
pentaromativorans US6-1]
gi|357600136|gb|EHJ61836.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Novosphingobium
pentaromativorans US6-1]
Length = 444
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 123/261 (47%), Gaps = 33/261 (12%)
Query: 23 QSGKRVMSELDFAAQVIPR--SIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
++G V+ +++ A P + +++ +TGTNGKST + V +L G+ A +GGN+G
Sbjct: 87 RAGVPVIGDIELFALARPSLPAHRVVGITGTNGKSTTTSLVHHLLEKAGVPARMGGNIGV 146
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMK 140
P I P+ V V+E+SSYQ+++ C V+ +LN+TPDHL+R+
Sbjct: 147 P--------ILGTDPLPEGGVYVLELSSYQIDLTRSLDC-DVAALLNITPDHLDRYDGFA 197
Query: 141 NYALTKCHLFSHMVNTKLGLLPFGNQHLN--EAIKGHRFNLAWIGAFPGVKIDTEAKTAS 198
YA +K LF+ + G+ + +G R L + G K+ T
Sbjct: 198 AYAASKARLFTMQGAEHDAVFGSGDAETAAIASTEGDRRGLDHVRIVDGAKLTT------ 251
Query: 199 FEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHR 258
LQ + G HN NAAVA V L G+ E + R PHR
Sbjct: 252 -----------LQKKWPSLQGPHNLQNAAVAVAIVEAL--GIKPEQWKRAMRNFRGLPHR 298
Query: 259 MQIVHRDIQGVTWVDDSKATN 279
M+ V + GV +++DSKATN
Sbjct: 299 MERVA-EADGVFYINDSKATN 318
>gi|323352742|ref|ZP_08087712.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Streptococcus
sanguinis VMC66]
gi|322121778|gb|EFX93524.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Streptococcus
sanguinis VMC66]
Length = 459
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 136/282 (48%), Gaps = 31/282 (10%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+ +TG+NGK+T T + Q+L G + GN+G P S+ A SSK + V+
Sbjct: 123 IIGITGSNGKTTTTTMIAQVLTAGGQNGLLSGNIGFPASQVAQTA----SSK---DMLVM 175
Query: 105 EVSSYQ-MEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPF 163
E+SS+Q M I + F P ++V+ NL P HL+ H +++ YA K ++ +M +L F
Sbjct: 176 ELSSFQLMGIED--FHPQIAVITNLMPTHLDYHGSVEEYAAAKWNIQKNMTADDYLVLNF 233
Query: 164 GNQHLNEAIKGHRFNLAWIGAFPGV-KIDT---EAKTASFEVPAVGVVSQLQLHNMKVMG 219
E + A + F K+D E +F A+ +Q+ + V G
Sbjct: 234 NQDWAKEMASQTQ---ATVVPFSTTEKVDGAYLEGDVLTFRGEAI-----MQVAEIGVPG 285
Query: 220 RHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATN 279
HN N A+A ++V L G+D + + + HR+Q V R + + + +DSK+TN
Sbjct: 286 SHNVEN-ALATIAVAKLR-GIDNQTIKEVLSAFGGVKHRLQYVGR-VNEIAFYNDSKSTN 342
Query: 280 LEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPL 321
+ AT L K +++ GG + N F++L+ L
Sbjct: 343 ILATQKALSGFDNSKVILIAGGLDR------GNEFDELVPDL 378
>gi|167622393|ref|YP_001672687.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Shewanella
halifaxensis HAW-EB4]
gi|167352415|gb|ABZ75028.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Shewanella
halifaxensis HAW-EB4]
Length = 439
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 161/332 (48%), Gaps = 43/332 (12%)
Query: 7 FLLEFQ--LKATGLAC-------LLQSGKRVMSELD-FAAQVIPRSIKILAVTGTNGKST 56
+L++ Q + + G+AC G V+ +++ FA +V S K++ +TG+NGK+T
Sbjct: 63 YLVQAQQIIISPGIACETPEVRVAFDMGIEVIGDVELFAREVSQGSAKVIGITGSNGKTT 122
Query: 57 VVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNK 116
V T VG+M G VGGN+G P + +PK ++ ++E+SS+Q+E +
Sbjct: 123 VTTLVGEMAKACGCSYAVGGNIGVPALDLLL--------EPK-ELYILELSSFQLETTHS 173
Query: 117 YFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHR 176
C T + LN++ DH++R+ +++Y K L+ +K+ L N+ + +
Sbjct: 174 LQC-TAATCLNISEDHMDRYSDLESYRQAKLKLYKQ---SKMVLF---NREDALTVPNNP 226
Query: 177 FNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGL 236
N G ++D + V G + + ++ ++G HN+ N A
Sbjct: 227 TNQESFG-LDAPEMDAWGISGGMIVH--GSSQIMAVSDVALVGSHNHANIIAAMALATAA 283
Query: 237 DIGVDVEALNSTIEILRT---PPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGH 293
I D + IE+ +T HR ++V +I GVT+V+DSKATN+ AT + L H
Sbjct: 284 GIERDFQ-----IEVAKTFSGLAHRCEVV-AEIAGVTYVNDSKATNIGATVAAIDGLSEH 337
Query: 294 --KCVILLGGQAKVLNGQESNGFEKLIEPLNH 323
+ +++ GG K G + E ++E ++
Sbjct: 338 LGELILIAGGDGK---GADFKPLEPVLEKVSQ 366
>gi|227538299|ref|ZP_03968348.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
[Sphingobacterium spiritivorum ATCC 33300]
gi|227241814|gb|EEI91829.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
[Sphingobacterium spiritivorum ATCC 33300]
Length = 457
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 142/300 (47%), Gaps = 36/300 (12%)
Query: 18 LACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGN 77
+ L Q G V+ E++FAAQ ++ +TG+NGKST +L G+ + GN
Sbjct: 90 VVALKQKGIPVIGEIEFAAQYT--DARLYCITGSNGKSTTTMLTYYILQKAGVNVGLAGN 147
Query: 78 LGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDHLERH 136
+G AL ++ +F V V+E+SS+ ++ + Y F V+V+LN+TPDHL+R+
Sbjct: 148 IG--------RSFALQVAQEQFDVYVLEISSFMLD--DMYQFRADVAVILNITPDHLDRY 197
Query: 137 K-TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKG----HRFNLAWIGA-----FP 186
M+NY +K + + + ++ E +KG H W P
Sbjct: 198 DHKMENYVDSKFRMIRNQTANDYFIYCLDDE---ETVKGLERHHTEATIWPMTQEQVINP 254
Query: 187 GVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAAL--SVLGLDIGVDVEA 244
G +D E K P G + ++ + G+HN +N A L V L E+
Sbjct: 255 GAYLDQE-KNIIINTPK-GEQFIMNTEDLSLQGKHNVYNNMAAGLVAKVQELRNRSMQES 312
Query: 245 LNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
++S + I PHR++ V I GV +++DSKATN+ + L + V+++GG K
Sbjct: 313 MSSYVNI----PHRLEHVAC-IGGVNYINDSKATNVNSVWYALESF-SPQIVLIMGGVDK 366
>gi|312128117|ref|YP_003992991.1| udp-n-acetylmuramoylalanine/d-glutamate ligase
[Caldicellulosiruptor hydrothermalis 108]
gi|311778136|gb|ADQ07622.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase
[Caldicellulosiruptor hydrothermalis 108]
Length = 458
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 150/301 (49%), Gaps = 27/301 (8%)
Query: 23 QSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPL 82
+ G V+ E++ A + +S I+A+TGTNGK+T T VG++L + V GN+G P
Sbjct: 91 KKGVEVIGEIELAYRFC-KSKNIVAITGTNGKTTTTTLVGEILKKQYEDVVVCGNIGLPF 149
Query: 83 SEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNY 142
I + + + V+E+SS+Q+E KYF P V +LN+TPDHL RH TM+NY
Sbjct: 150 -------IDTVETSSENTIFVLEISSFQLETI-KYFKPKVGCILNITPDHLNRHMTMENY 201
Query: 143 ALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGA----FPGVK-IDTEAKTA 197
K +F ++ +L + N + I + N+ F V ++ +
Sbjct: 202 IKAKMRIFENIDEMGYTVLNYDNNVTRDLIGLAKGNVIVFSKTKTQFENVVFVENDVIYF 261
Query: 198 SFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPH 257
+FE V+ + ++ + G+HN N A+AA+S L G++ + + ++ R H
Sbjct: 262 TFEGKTQEVMKKDEIF---IPGQHNLEN-ALAAISCT-LPFGIEKDTIEQVLKTFRGVEH 316
Query: 258 RMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKL 317
R++ V +I G+ + +DSK TN +A + K + +++ GG K FEK
Sbjct: 317 RIEFVA-EINGIKFYNDSKGTNTDAAEKAISAFK-NPIILIAGGYDK------GESFEKF 368
Query: 318 I 318
+
Sbjct: 369 V 369
>gi|225389931|ref|ZP_03759655.1| hypothetical protein CLOSTASPAR_03681 [Clostridium asparagiforme
DSM 15981]
gi|225044011|gb|EEG54257.1| hypothetical protein CLOSTASPAR_03681 [Clostridium asparagiforme
DSM 15981]
Length = 452
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 93/287 (32%), Positives = 142/287 (49%), Gaps = 31/287 (10%)
Query: 28 VMSELDFAAQVIPRSI-KILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAA 86
++ EL+ A Q S+ ++LA+TGTNGK+T G++L + +V GN+G P + A
Sbjct: 95 IIGELELAYQ---SSLGRLLAITGTNGKTTTTALTGEILKAQFEDVYVVGNIGEPYT-AK 150
Query: 87 FHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTK 146
+ S V V EVSS+Q+E F P VS +LN+TPDHL RHKTM+NY K
Sbjct: 151 VETMTAES------VTVAEVSSFQLETILD-FRPEVSAILNITPDHLNRHKTMENYIQIK 203
Query: 147 CHLFSHMVNTKLGLLPFGNQHLNEAIKGHRF--NLAWIGAFPGVKI------DTEAKTAS 198
+ + +L + + L E + + W + +K DT S
Sbjct: 204 EAITLNQTEEDAVVLNYDDPVLREFGESGELKPRVIWFSSREKLKDGFCMNGDTIVYCKS 263
Query: 199 -FEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPH 257
E P + V H+M ++GRHNY N V A + + + +GV +E + I R H
Sbjct: 264 GRETPVINV------HSMHLLGRHNYEN--VMAAAAMSMQMGVPLEKITQVIRDFRPVEH 315
Query: 258 RMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
R++ V R+ GV + +DSK TN +A L + G +++ GG K
Sbjct: 316 RIEFV-RERTGVKYYNDSKGTNPDAAIQALRAMPG-PTILIAGGYDK 360
>gi|149377264|ref|ZP_01895011.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Marinobacter
algicola DG893]
gi|149358452|gb|EDM46927.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Marinobacter
algicola DG893]
Length = 446
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 133/293 (45%), Gaps = 37/293 (12%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+A+TG+NGK+TV T VG+M G VGGN+G P AL + V+
Sbjct: 111 IIAITGSNGKTTVTTLVGEMARAAGRRVEVGGNIGTP---------ALDLLGRGADLYVL 161
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGL---- 160
E+SS+Q+E + + VLN++ DH++R+ Y K +F+ N + L
Sbjct: 162 ELSSFQLET-TRELNALAATVLNVSDDHMDRYPDKMAYFQAKQRIFNGCQNAVVNLDDAL 220
Query: 161 -LPFGNQHLNEAIKG-HRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVM 218
P +L G +R N + D E +F G + L + +M
Sbjct: 221 STPMARDNLRFLCFGFYRVNPDTF----STRDDDEGTWITF-----GFDNLLLAEELGLM 271
Query: 219 GRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKAT 278
G+HN N A + +DV + T++ + PHR + V R + V +++DSK T
Sbjct: 272 GQHNISNVMAALALGHAAGLPMDV--MLDTVKRFKGLPHRCEFVRR-VSDVDYINDSKGT 328
Query: 279 NLEATCTGLMDL--KGHKCVILLGGQAKVLNGQESNGFEKLIEPLNHH-RCVI 328
N+ AT + L G K V++ GG+ K + F L EP+ H R V+
Sbjct: 329 NVGATTAAIESLVPTGGKIVLIAGGEGKGAD------FSLLAEPVAAHCRAVV 375
>gi|357060976|ref|ZP_09121738.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Alloprevotella rava
F0323]
gi|355375511|gb|EHG22797.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Alloprevotella rava
F0323]
Length = 443
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 145/316 (45%), Gaps = 67/316 (21%)
Query: 12 QLKATGLACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIE 71
Q+KA G+ V+SE++FA + + K + +TG+NGK+T + + +L G
Sbjct: 80 QVKAAGIP--------VISEIEFAGRYT--NAKTICITGSNGKTTTTSLIYHILQKAGYN 129
Query: 72 AFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTP 130
+ GN+G AL ++ K V+E+SS+Q++ N Y F ++V+LN+TP
Sbjct: 130 VGLAGNIGK--------SFALQVAEGKHDWYVIELSSFQLD--NMYDFRADIAVLLNITP 179
Query: 131 DHLERHK-TMKNYALTKCHLFS---------------------HMVNTKLGLLPFGNQHL 168
DHL+R+ M+NY +K + H N+ +L F +
Sbjct: 180 DHLDRYDFKMQNYVNSKMRILQNQRPEDSFIYWAQDEWIPNELHKYNSPARMLEFSDMPK 239
Query: 169 NEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAV 228
EA+ NL I ++ SFE + + + + G HN N+
Sbjct: 240 AEAVAYEENNLLKI-----------SQPLSFE---------MDVDELSLPGLHNLRNSMA 279
Query: 229 AALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLM 288
AL+ L GV E + + HR++ V D+ GV +++DSKATN++A L
Sbjct: 280 GALATLS--AGVAPEVVREGLSDFPGVEHRLEKVC-DVDGVHYINDSKATNVDACYWALA 336
Query: 289 DLKGHKCVILLGGQAK 304
++ V+++GG+ K
Sbjct: 337 AMR-TPTVLIIGGKDK 351
>gi|30316124|sp|Q9F1N2.1|MURD_SHEVD RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|11761333|dbj|BAB19200.1| MurD [Shewanella violacea]
Length = 449
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 138/276 (50%), Gaps = 30/276 (10%)
Query: 34 FAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALP 93
FA + RS ++ +TG+NGKSTV T VG+M G+ VGGN+G P+ L
Sbjct: 100 FARAIKDRSPCVIGITGSNGKSTVTTLVGEMAKAAGLNYAVGGNIGIPV---------LD 150
Query: 94 SSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHM 153
+ + ++E+SS+Q+E + C + + LN++ DH++R+ ++ Y K L+
Sbjct: 151 LLQKPVDLYILELSSFQLETTHSLNCISAT-CLNISEDHMDRYSDLEAYRQAKLALYDQ- 208
Query: 154 VNTKLGLLPFGNQ--HLNEAIKGHRFNL-AWIGAFPGVKIDTEAKTASFEVPAVGVVSQL 210
+K L + N+ + + F L + + GVK D + + E+ +
Sbjct: 209 --SKRALFNREDSLTQPNDPMNQNSFGLTSPVNDEWGVK-DGKIVHGTTEIAS------- 258
Query: 211 QLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVT 270
L ++ ++G HN+ N +AA++ L G+D E + + HR ++V +I V
Sbjct: 259 -LQDVAIVGSHNHAN-LIAAMA-LAYHAGIDKEPMIQVAKNFTGLAHRCELV-ANIAAVA 314
Query: 271 WVDDSKATNLEATCTGLMDLKGH--KCVILLGGQAK 304
+V+DSKATN+ AT L L H ++++GG K
Sbjct: 315 YVNDSKATNVGATVAALEGLGEHLGDIILIVGGDGK 350
>gi|333924511|ref|YP_004498091.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Desulfotomaculum
carboxydivorans CO-1-SRB]
gi|333750072|gb|AEF95179.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Desulfotomaculum
carboxydivorans CO-1-SRB]
Length = 462
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 130/277 (46%), Gaps = 14/277 (5%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V+ EL+ A + I+A+TGTNGK+T + +GQM G V GN+G PL+
Sbjct: 104 VIGELELAYRFA--RAPIVAITGTNGKTTTTSLIGQMFRDAGYHTLVAGNIGLPLASEV- 160
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
+ + + V EVSS+Q+E + F P V+VVLN+TPDHL+RH +M Y K
Sbjct: 161 ------ENYSRQDIIVAEVSSFQLET-TQSFAPRVAVVLNVTPDHLDRHGSMAEYIRAKS 213
Query: 148 HLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVV 207
+F+H +L + + E + + ++ + V GV
Sbjct: 214 LIFAHQDQEDWAVLNYDDPVTREMAADCPSQVLFFSRQHILEKGIYVQDGKIMVADQGVT 273
Query: 208 SQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQ 267
++ +++ G HN NA A + + G+ L T+E HR++ V I
Sbjct: 274 EITPVNTLRIPGAHNLENALAAVAAGYAM--GIAATDLARTLESFAGVAHRLEYVAT-ID 330
Query: 268 GVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
GV +++DSK TN +A L D +++ GG+ K
Sbjct: 331 GVKYINDSKGTNPDAAIKAL-DAYNEPIILIAGGKNK 366
>gi|323701286|ref|ZP_08112961.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Desulfotomaculum
nigrificans DSM 574]
gi|323533888|gb|EGB23752.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Desulfotomaculum
nigrificans DSM 574]
Length = 462
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 130/277 (46%), Gaps = 14/277 (5%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V+ EL+ A + I+A+TGTNGK+T + +GQM G V GN+G PL+
Sbjct: 104 VIGELELAYRFA--RAPIVAITGTNGKTTTTSLIGQMFRDAGYHTLVAGNIGLPLASEV- 160
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
+ + + V EVSS+Q+E + F P V+VVLN+TPDHL+RH +M Y K
Sbjct: 161 ------ENYSRQDIIVAEVSSFQLET-TQSFAPRVAVVLNVTPDHLDRHGSMAEYIRAKS 213
Query: 148 HLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVV 207
+F+H +L + + E + + ++ + V GV
Sbjct: 214 LIFAHQDQEDWAVLNYDDPVTREMAADCPSQVLFFSRQHILEKGIYVQDGKIMVADQGVT 273
Query: 208 SQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQ 267
++ +++ G HN NA A + + G+ L T+E HR++ V I
Sbjct: 274 EITPVNTLRIPGAHNLENALAAVAAGYAM--GIAATDLARTLESFAGVAHRLEYVAT-ID 330
Query: 268 GVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
GV +++DSK TN +A L D +++ GG+ K
Sbjct: 331 GVKYINDSKGTNPDAAIKAL-DAYNEPIILIAGGKNK 366
>gi|333381686|ref|ZP_08473365.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Dysgonomonas gadei
ATCC BAA-286]
gi|332829615|gb|EGK02261.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Dysgonomonas gadei
ATCC BAA-286]
Length = 444
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 153/307 (49%), Gaps = 33/307 (10%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
++ G ++SE++FA + + K++ +TG+NGK+T + + +L G+ +GGN+G
Sbjct: 83 IEKGIPILSEMEFAKRYT--TAKMICITGSNGKTTTTSLIYHILKSAGLNVGLGGNIG-- 138
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDHLERHK-TM 139
A ++ + V+E+SS+Q+E N Y F ++++LN+TPDHL+R+ +
Sbjct: 139 ------RSFARQVAEENYDYYVLELSSFQLE--NMYSFKADIAILLNITPDHLDRYDHDI 190
Query: 140 KNYALTKCHLFSHMVNTKLGLL----PFGNQHLNEAI-KGHRFNLAW--IGAFPGVKIDT 192
+ Y K + + + P ++ + + + KG ++ A +G D
Sbjct: 191 QKYIDAKMRIVQNQTEADAFIFWEEDPIVSKEIKKLVSKGKQYTFAEHKVGNAIAYLNDH 250
Query: 193 EAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEIL 252
E P + + L + + G HN +N+ + ++ LDI D L ++
Sbjct: 251 E---IDINTPNSAFIMEQDL--LALEGTHNLYNSLASGIAAKLLDITDD--NLRHSLSDF 303
Query: 253 RTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESN 312
+ HR++ V + ++G+ +++DSKATN+ + L +K K V++LGG K G +
Sbjct: 304 QGVEHRLEKVAK-VKGIQFINDSKATNVNSCWYALQSMKT-KVVLILGGTDK---GNDYT 358
Query: 313 GFEKLIE 319
E+L++
Sbjct: 359 EIEQLVK 365
>gi|294142806|ref|YP_003558784.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Shewanella
violacea DSS12]
gi|293329275|dbj|BAJ04006.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Shewanella
violacea DSS12]
Length = 451
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 138/276 (50%), Gaps = 30/276 (10%)
Query: 34 FAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALP 93
FA + RS ++ +TG+NGKSTV T VG+M G+ VGGN+G P+ L
Sbjct: 102 FARAIKDRSPCVIGITGSNGKSTVTTLVGEMAKAAGLNYAVGGNIGIPV---------LD 152
Query: 94 SSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHM 153
+ + ++E+SS+Q+E + C + + LN++ DH++R+ ++ Y K L+
Sbjct: 153 LLQKPVDLYILELSSFQLETTHSLNCISAT-CLNISEDHMDRYSDLEAYRQAKLALYDQ- 210
Query: 154 VNTKLGLLPFGNQ--HLNEAIKGHRFNL-AWIGAFPGVKIDTEAKTASFEVPAVGVVSQL 210
+K L + N+ + + F L + + GVK D + + E+ +
Sbjct: 211 --SKRALFNREDSLTQPNDPMNQNSFGLTSPVNDEWGVK-DGKIVHGTTEIAS------- 260
Query: 211 QLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVT 270
L ++ ++G HN+ N +AA++ L G+D E + + HR ++V +I V
Sbjct: 261 -LQDVAIVGSHNHAN-LIAAMA-LAYHAGIDKEPMIQVAKNFTGLAHRCELV-ANIAAVA 316
Query: 271 WVDDSKATNLEATCTGLMDLKGH--KCVILLGGQAK 304
+V+DSKATN+ AT L L H ++++GG K
Sbjct: 317 YVNDSKATNVGATVAALEGLGEHLGDIILIVGGDGK 352
>gi|329964558|ref|ZP_08301612.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Bacteroides
fluxus YIT 12057]
gi|328524958|gb|EGF52010.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Bacteroides
fluxus YIT 12057]
Length = 466
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 147/305 (48%), Gaps = 30/305 (9%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
L + G V+SE++FA + K++ +TG+NGK+T + + + G+ + GN+G+
Sbjct: 104 LKEKGTPVISEIEFAGRYT--DAKMICITGSNGKTTTTSLIYHIFKSAGLNVGLAGNIGS 161
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDHLERHK-T 138
L AL + K ++E+SS+Q++ N Y F ++V++N+TPDHL+R+
Sbjct: 162 SL--------ALQVATEKHDYYIIELSSFQLD--NMYKFRANIAVLMNITPDHLDRYDHC 211
Query: 139 MKNYALTKCHLFSHMVNTKLGLL----PFGNQHLNE-AIKGHRFNLAWIGAFPGVKIDTE 193
M+NY K + + + P + L + +K H + A + GV E
Sbjct: 212 MQNYVDAKFRITQNQTPDDAFIYWNDDPIIKRELAKHGLKAHLYPFAAVKK-DGVIAYVE 270
Query: 194 AKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILR 253
P + ++ + + G HN +N+ A +S L G+ E + + +
Sbjct: 271 DGEVEINEP---IAFNMEQEELALRGTHNLYNSLAAGISA-NL-AGIRKEYIRKALSDFK 325
Query: 254 TPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNG 313
HR++ V ++GV +++DSKATN+ + L + K V++LGG+ K G +
Sbjct: 326 GVEHRLEKVAT-VRGVQFINDSKATNVNSCWYALQSMT-TKTVLILGGKDK---GNDYTE 380
Query: 314 FEKLI 318
E L+
Sbjct: 381 IEDLV 385
>gi|255692976|ref|ZP_05416651.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Bacteroides
finegoldii DSM 17565]
gi|260621289|gb|EEX44160.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Bacteroides
finegoldii DSM 17565]
Length = 444
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 150/308 (48%), Gaps = 36/308 (11%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
L G V+SE++FA + + K++ +TG+NGK+T + + + G+ + GN+G
Sbjct: 82 LKAQGTPVISEIEFAGRYT--NAKMICITGSNGKTTTTSLIYHIFKSAGMNVGLAGNIGK 139
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDHLERHK-T 138
L AL ++ ++E+SS+Q++ N Y F ++V++N+TPDHL+R+
Sbjct: 140 SL--------ALQVAEDHHDYYIIELSSFQLD--NMYNFRANIAVLMNITPDHLDRYDHC 189
Query: 139 MKNYALTKCHLFSHMVNTKLGLL----PFGNQHL-NEAIKGHRFNLAWI---GAFPGVKI 190
M+NY K + + + P + L +K H + A + GA V+
Sbjct: 190 MQNYIDAKFRITQNQTPDDAFIFWNDDPIIKRELAKHGLKAHLYPFAAVKEDGAIAYVE- 248
Query: 191 DTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIE 250
D E K + ++ + + G+HN +N+ A +S L G+ E + +
Sbjct: 249 DHEVKINE------PIAFNMEQEELALTGQHNLYNSLAAGISA-NL-AGITKENIRKALS 300
Query: 251 ILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQE 310
+ HR++ V R ++G+ +++DSKATN+ + L + K V++LGG+ K G +
Sbjct: 301 DFKGVEHRLEKVAR-VRGIDFINDSKATNVNSCWYALQSMTT-KTVLILGGKDK---GND 355
Query: 311 SNGFEKLI 318
E L+
Sbjct: 356 YTEIEDLV 363
>gi|423690027|ref|ZP_17664547.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Pseudomonas
fluorescens SS101]
gi|388001307|gb|EIK62636.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Pseudomonas
fluorescens SS101]
Length = 448
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 91/295 (30%), Positives = 141/295 (47%), Gaps = 40/295 (13%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+A++G+N KSTV T VG+M G VGGNLG P AL ++ V+
Sbjct: 111 IVAISGSNAKSTVTTLVGEMAAAAGKRVAVGGNLGVP---------ALDLLSDDVELYVM 161
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLF----SHMVNTKLGL 160
E+SS+Q+E + V+ VLN++ DH++R+ + Y L K +F +VN + L
Sbjct: 162 ELSSFQLETTHD-LGAEVATVLNVSEDHMDRYSGLPAYHLAKHRIFRGARQFVVNRQDAL 220
Query: 161 LPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTE--AKTASFEVPAVGVVSQLQLHNMKVM 218
+ E + F L F G I E K +FE + + + +K+
Sbjct: 221 ---SRPLMGEGMPCWTFGLGKPD-FKGFGIREENGEKYLAFEFQNL-----MPVRELKIR 271
Query: 219 GRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKAT 278
G HN NA A LG +G+ +A+ +++ HR Q V RD+ GV++ +DSKAT
Sbjct: 272 GAHNQSNALAA--LALGHAVGLPFDAMLASLRTFAGLEHRCQWV-RDLNGVSYYNDSKAT 328
Query: 279 NLEATCTGL----MDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPLNHH-RCVI 328
N+ A + D+ G K V++ GG K + F+ L P+ H R V+
Sbjct: 329 NVGAALAAIEGLGADIDG-KLVLIAGGDGKGAD------FKDLKAPVAAHCRAVV 376
>gi|284048640|ref|YP_003398979.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Acidaminococcus
fermentans DSM 20731]
gi|283952861|gb|ADB47664.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Acidaminococcus
fermentans DSM 20731]
Length = 473
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 131/280 (46%), Gaps = 24/280 (8%)
Query: 47 AVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEV 106
AVTG+NGK+T T +G+ML L ++ V GN+G LS+ L VA E+
Sbjct: 127 AVTGSNGKTTTTTLLGEMLATLPVKTAVAGNIGFALSK------ELQDLDQDSWVA-AEL 179
Query: 107 SSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFGNQ 166
SS+Q+E P V+ ++N+TPDH ERH M Y K +F+ ++ +L +
Sbjct: 180 SSFQLE-GTTSLAPDVACIVNITPDHFERHGDMAGYVAAKSKIFAFQTPDQILILNADDP 238
Query: 167 HLNEAIKGHRFNLAWIGAFPGVKIDTEA---KTASFEVPAVGVVSQL-QLHNMKVMGRHN 222
++ R + W F K+ E + F + G ++ Q+ ++++ G HN
Sbjct: 239 VSSKLGDKARSRVIW---FSTEKVLPEGGFIEDGWFTLALDGKKERICQVSDLQIFGAHN 295
Query: 223 YHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEA 282
+ A LS GV E + ++ R HR++ V I GV + +DSKATN ++
Sbjct: 296 EQDVLAACLSAHF--AGVTAENMARVLKAFRGVEHRLEYVTA-INGVKYYNDSKATNTDS 352
Query: 283 TCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPLN 322
L K ++L GG K+ G + L+E +
Sbjct: 353 AIKALEAFKDGHVILLAGGHDKM------TGLDDLMEAVK 386
>gi|402698518|ref|ZP_10846497.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Pseudomonas
fragi A22]
Length = 448
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 134/270 (49%), Gaps = 33/270 (12%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+A++G+N KSTV T VG+M G VGGNLG P AL ++ V+
Sbjct: 111 IVAISGSNAKSTVTTLVGEMALAAGKRVAVGGNLGTP---------ALDLLSDDIELYVM 161
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSH----MVNTKLGL 160
E+SS+Q+E N+ V+ VLN++ DH++R+ + Y L K +F +VN + L
Sbjct: 162 ELSSFQLETTNQ-LGAEVATVLNVSEDHMDRYSGLPAYHLAKHRIFRGARQVVVNRQDAL 220
Query: 161 LPFGNQHLNEAIKGHRFNLAW--IGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVM 218
++E + F L+ AF G++ + K +FE + + + +KV
Sbjct: 221 T---RPLMSEGLPCWTFGLSAPDFKAF-GLREENGEKYLAFEFENL-----MPVRELKVR 271
Query: 219 GRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKAT 278
G HN A A LG +G+ +A+ S + HR Q V R+ +GV++ +DSKAT
Sbjct: 272 GAHN--QANALAALALGHAVGLPFDAMLSGLRSFTGLEHRCQWV-REFEGVSYYNDSKAT 328
Query: 279 NLEATCTGL----MDLKGHKCVILLGGQAK 304
N+ A + D+ G K V++ GG K
Sbjct: 329 NVGAALAAIEGLGADMDG-KLVLIAGGDGK 357
>gi|323486714|ref|ZP_08092035.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Clostridium
symbiosum WAL-14163]
gi|323692147|ref|ZP_08106390.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Clostridium
symbiosum WAL-14673]
gi|355623454|ref|ZP_09047199.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Clostridium sp.
7_3_54FAA]
gi|323400095|gb|EGA92472.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Clostridium
symbiosum WAL-14163]
gi|323503721|gb|EGB19540.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Clostridium
symbiosum WAL-14673]
gi|354822332|gb|EHF06694.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Clostridium sp.
7_3_54FAA]
Length = 448
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 140/293 (47%), Gaps = 15/293 (5%)
Query: 13 LKATGLACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEA 72
L A + L ++G + SE+ A K+ A+TGTNGK+T G+++
Sbjct: 78 LDAPFVTVLDEAGVPIWSEIQLAYHCAKG--KLAAITGTNGKTTTTALTGEIMRSFYDSV 135
Query: 73 FVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDH 132
FV GN+G P + H + S V V EVSS+Q+E F P VS +LN+TPDH
Sbjct: 136 FVVGNIGEPYTA---HALETEES----SVTVAEVSSFQLETIMD-FRPNVSAILNITPDH 187
Query: 133 LERHKTMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDT 192
L+RHKTM+ Y K + + + +L + + L E + + N+ + + +K
Sbjct: 188 LDRHKTMECYTQVKESITKNQKDGDTCVLNYDDTVLREFGETLKINVVYFSSREKLKKGY 247
Query: 193 EAKTASFEVPAVGVVSQL-QLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEI 251
+ V+++ + +K++GRHN+ N V A + +++ V +E + I
Sbjct: 248 YLEDGKIVYNDGSKVTEIVDISELKLLGRHNHEN--VMAAVAISMNMDVPLEKIQEVIRK 305
Query: 252 LRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
HR++ V GV + +DSK TN +A + + G +++ GG K
Sbjct: 306 FEAVEHRIEFVTERF-GVKYYNDSKGTNPDAAMQAIKAMPG-PTILIAGGYDK 356
>gi|406955583|gb|EKD83999.1| hypothetical protein ACD_39C00311G0002, partial [uncultured
bacterium]
Length = 350
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 136/287 (47%), Gaps = 37/287 (12%)
Query: 16 TGLACLLQSGKR---VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEA 72
T + L+++ R V SE++ A ++ K L +TG+NGK+T + + E
Sbjct: 80 TDIPVLVEAAARNIPVYSEIEIAYRL--SQGKRLVITGSNGKTTTTSLLALFCQQQFNEV 137
Query: 73 FVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDH 132
F+GGN+G P+ E A S + V+EVSS+Q+E + F P ++V+ N +H
Sbjct: 138 FLGGNIGIPMMEFA-------SQTTGNSLQVLEVSSFQLETISD-FKPDIAVITNFFENH 189
Query: 133 LERHKTMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIG-----AFPG 187
L+R+ + K Y K + +M + + +L Q + E AW G P
Sbjct: 190 LDRYPSYKAYIEAKKRIALNMRSGETIVLNADQQMMREMAGELNCRAAWFGWNVGNLKPA 249
Query: 188 VKI--DTEAKTASFEV-----PAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGV 240
+ I D T + +V PA V +++GRHN N AAL + + GV
Sbjct: 250 MTIINDEFVYTDADDVKHKLFPAASV---------RIIGRHNLENVMCAAL--VAILAGV 298
Query: 241 DVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGL 287
+ L S ++ HR++ R+I GVT+++DSK TN A+ T L
Sbjct: 299 AEDCLESVVKEFPGVEHRLEWA-REISGVTFINDSKGTNCAASITAL 344
>gi|423346169|ref|ZP_17323857.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Parabacteroides
merdae CL03T12C32]
gi|409220967|gb|EKN13920.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Parabacteroides
merdae CL03T12C32]
Length = 453
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 154/317 (48%), Gaps = 29/317 (9%)
Query: 14 KATGLACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAF 73
KA + L + G ++SE++FA + K++ +TG+NGK+T +L G++A
Sbjct: 84 KAPIIKKLKEKGTPIISEIEFAGRYT--DAKMICITGSNGKTTTTMLTYHILRQAGVDAG 141
Query: 74 VGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDH 132
+ GN+GN L AL ++ V V+E+SS+Q++ N Y F ++++LN+TPDH
Sbjct: 142 LAGNVGNSL--------ALQVAEDPHAVYVIELSSFQLD--NMYDFKADIAILLNITPDH 191
Query: 133 LERHK-TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAF-----P 186
L+ + M+NY K + + + + + I R A + F
Sbjct: 192 LDCYNYEMQNYVDAKFRIIRNQTAEDAFIFWNDDPIIAREI-AKRHPQATLYPFAETHEA 250
Query: 187 GVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALN 246
GVK TE K E + L + + G HN +N+ + ++ +DI E L
Sbjct: 251 GVKGYTEDKKIIIETSNGTFTMEEDL--LALSGTHNLYNSLASGIASKLVDIH--DENLR 306
Query: 247 STIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVL 306
+++ HR++ V R ++GV +++DSKATN+ + L + V++LGG K
Sbjct: 307 ASLSDFTGVEHRLEKVAR-VRGVDFINDSKATNVNSCWYALQSMTT-PLVLILGGTDK-- 362
Query: 307 NGQESNGFEKLIEPLNH 323
G + + E+L++ H
Sbjct: 363 -GNDYSEIEELVKKKVH 378
>gi|344996592|ref|YP_004798935.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase
[Caldicellulosiruptor lactoaceticus 6A]
gi|343964811|gb|AEM73958.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase
[Caldicellulosiruptor lactoaceticus 6A]
Length = 458
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 142/284 (50%), Gaps = 22/284 (7%)
Query: 23 QSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPL 82
+ G V+ E++ A + +S I+A+TGTNGK+T T VG++L + V GN+G P
Sbjct: 91 KKGIEVIGEIELAYRFC-KSKNIVAITGTNGKTTTTTLVGEILKKQYEDVVVCGNIGLPF 149
Query: 83 SEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNY 142
I + K + V+E+SS+Q+E KYF P V +LN+TPDHL RH TM+NY
Sbjct: 150 -------IDTIETSSKNTIFVLEISSFQLETI-KYFKPKVGCILNITPDHLNRHMTMENY 201
Query: 143 ALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPG-----VKIDTEAKTA 197
K +F ++ +L + N + I + N+ V ++ +
Sbjct: 202 IKAKMRIFENIDEMGYTVLNYDNNITRDLIGLAKGNVIVFSKNKSQFENMVFVEKDTIYF 261
Query: 198 SFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPH 257
+FE V+ + ++ + G HN N A+AA+S L G++ + + ++ R H
Sbjct: 262 TFEGKTQEVMKKDEIF---IPGEHNLEN-ALAAISCT-LPFGIEKDTIEQVLKTFRGVEH 316
Query: 258 RMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGG 301
R++ V +I G+ + +DSK TN +A L + +IL+ G
Sbjct: 317 RIEFVA-EINGIKFYNDSKGTNTDAAEKALRAFESP--IILIAG 357
>gi|72382768|ref|YP_292123.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
[Prochlorococcus marinus str. NATL2A]
gi|122063254|sp|Q46JA8.1|MURD_PROMT RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|72002618|gb|AAZ58420.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Prochlorococcus
marinus str. NATL2A]
Length = 469
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 133/268 (49%), Gaps = 27/268 (10%)
Query: 46 LAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVE 105
+ +TGTNGK+TV + +L + +GGN+G LS+ A + ++ + V+E
Sbjct: 121 VGITGTNGKTTVTNMLNHILKLNNLNTDMGGNVGKALSKIALEN--MKNNDQELDWLVLE 178
Query: 106 VSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFS----HMVNTKLGLL 161
+SS+Q+E K PT+ + TPDHLERH M++Y K L + N+ L
Sbjct: 179 LSSFQIEGSPK-VAPTIGIWTTFTPDHLERHNDMESYFKIKRSLLEKSSIRIYNSDDQYL 237
Query: 162 PFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVV--SQLQLHNMKVM- 218
+ L + I W+G + ++ F + G + + QL + ++
Sbjct: 238 SSKRKELPKGI--------WVGTN---QQSLYSQYQKFWIDQKGYIFEDKKQLFHSSILN 286
Query: 219 --GRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSK 276
G+HN N +A + +IG+D ++ +I+ ++ PHR++ + ++ +++ +DSK
Sbjct: 287 IPGKHNLQNLLLAIAA--AREIGLDDSSIAKSIKSFKSIPHRLEYLG-NVNNLSFYNDSK 343
Query: 277 ATNLEATCTGLMDLKGHKCVILLGGQAK 304
ATN +++ T L + H ++L GG K
Sbjct: 344 ATNFDSSITALKSVP-HPIILLAGGIQK 370
>gi|363895019|ref|ZP_09322039.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Eubacteriaceae
bacterium ACC19a]
gi|361959776|gb|EHL13037.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Eubacteriaceae
bacterium ACC19a]
Length = 449
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 136/271 (50%), Gaps = 29/271 (10%)
Query: 59 TFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQME-IPNKY 117
+ +G + +V GN+GN A I+L +K F + E+SSYQ+E I N
Sbjct: 120 SMLGDIYKKYDENTYVVGNIGN----AVLSSISLAKTKANF---ITELSSYQLETIVN-- 170
Query: 118 FCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRF 177
F ++V+LN+TPDHL RHKTM+NY K ++ + + + +L ++ ++ ++ +
Sbjct: 171 FRVHIAVILNITPDHLSRHKTMENYKNAKYNITKNQIESDFLVLNKDDESIDINLENVKS 230
Query: 178 NLAWIGAFP----GVKIDTEAKT--ASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAAL 231
+ + GV D E + ++ ++ +H ++G+HN N +A +
Sbjct: 231 KVIYFSMKEKLKNGVYYDREKDSIISTINGKEEEIIKAEDIH---LLGKHNIQN-TLACV 286
Query: 232 SVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLK 291
+V LD + + I+ + HR+Q V R++ GV +V+DSK TN+++T + +
Sbjct: 287 TVSILD-KIPTALIAEAIKDFKAVKHRLQKV-REVDGVIYVNDSKGTNIDSTLKAIESI- 343
Query: 292 GHKCVILLGGQAKVLNGQESNGFEKLIEPLN 322
+ +++ GG K+L F+ LI+ N
Sbjct: 344 DNDIILIAGGYDKMLE------FDDLIKGFN 368
>gi|238019064|ref|ZP_04599490.1| hypothetical protein VEIDISOL_00926 [Veillonella dispar ATCC 17748]
gi|237864319|gb|EEP65609.1| hypothetical protein VEIDISOL_00926 [Veillonella dispar ATCC 17748]
Length = 456
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 98/310 (31%), Positives = 155/310 (50%), Gaps = 30/310 (9%)
Query: 25 GKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSE 84
G V+SE++ A ++ I+AVTGTNGK+T T + ++L G VGGN+G+ LSE
Sbjct: 92 GIDVVSEVEVAYEL--SKSPIVAVTGTNGKTTTTTLLTKVLEGTGKPVRVGGNIGDSLSE 149
Query: 85 AAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYAL 144
A+ S P V E+SSYQ+E K+F P +++LN+T DHL RHKTM+NY
Sbjct: 150 VAY-------SMPADGFLVAELSSYQLETI-KHFRPIGAIMLNITADHLARHKTMENYIA 201
Query: 145 TKCHLFSHMVNTKLGLLPFGN---QHLNEAIKGHRFNLAWIGAFP-GVKIDTEAKTASFE 200
K +F + ++T +L + + + H ++ P G D + +
Sbjct: 202 AKERIFENQLSTDFMVLNIDDPIVADMEHRVLSHILKISQHQVVPNGAYYDKGQCYVTKD 261
Query: 201 VPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLD--IGVDVEALNSTIEILRTPPHR 258
A V+ +H + G HN N L+V+ L +GV E ++ I HR
Sbjct: 262 GIATPVIGSDDIH---IPGSHNIEN----ILTVIALTYVLGVPAETIHRIISEFHGVEHR 314
Query: 259 MQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
++ V + I G+T+ +DSKATN+++ L + VILL G + E F +L+
Sbjct: 315 LERV-KTIDGITFYNDSKATNVDSVVKALESFD--QSVILLAGGHDKMTPLED--FMQLV 369
Query: 319 EPLNHHRCVI 328
+ +H + VI
Sbjct: 370 K--DHTKAVI 377
>gi|23502304|ref|NP_698431.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Brucella suis
1330]
gi|148559574|ref|YP_001259326.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Brucella ovis
ATCC 25840]
gi|161619381|ref|YP_001593268.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Brucella
canis ATCC 23365]
gi|225852915|ref|YP_002733148.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Brucella
melitensis ATCC 23457]
gi|256263604|ref|ZP_05466136.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Brucella melitensis
bv. 2 str. 63/9]
gi|260566062|ref|ZP_05836532.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Brucella suis bv. 4
str. 40]
gi|261214417|ref|ZP_05928698.1| D-glutamic acid-adding enzyme [Brucella abortus bv. 3 str. Tulya]
gi|261325497|ref|ZP_05964694.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Brucella neotomae
5K33]
gi|261752724|ref|ZP_05996433.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Brucella suis bv. 5
str. 513]
gi|261755384|ref|ZP_05999093.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Brucella suis bv. 3
str. 686]
gi|265995328|ref|ZP_06107885.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Brucella melitensis
bv. 3 str. Ether]
gi|376281096|ref|YP_005155102.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Brucella suis
VBI22]
gi|384211800|ref|YP_005600882.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Brucella
melitensis M5-90]
gi|384225090|ref|YP_005616254.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Brucella suis
1330]
gi|384408910|ref|YP_005597531.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Brucella
melitensis M28]
gi|384445473|ref|YP_005604192.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Brucella
melitensis NI]
gi|30316052|sp|Q8FZP2.1|MURD_BRUSU RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|23348281|gb|AAN30346.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Brucella suis
1330]
gi|148370831|gb|ABQ60810.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Brucella ovis ATCC
25840]
gi|161336192|gb|ABX62497.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Brucella canis
ATCC 23365]
gi|225641280|gb|ACO01194.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Brucella
melitensis ATCC 23457]
gi|260155580|gb|EEW90660.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Brucella suis bv. 4
str. 40]
gi|260916024|gb|EEX82885.1| D-glutamic acid-adding enzyme [Brucella abortus bv. 3 str. Tulya]
gi|261301477|gb|EEY04974.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Brucella neotomae
5K33]
gi|261742477|gb|EEY30403.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Brucella suis bv. 5
str. 513]
gi|261745137|gb|EEY33063.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Brucella suis bv. 3
str. 686]
gi|262766441|gb|EEZ12230.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Brucella melitensis
bv. 3 str. Ether]
gi|263093655|gb|EEZ17660.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Brucella melitensis
bv. 2 str. 63/9]
gi|326409457|gb|ADZ66522.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Brucella
melitensis M28]
gi|326539163|gb|ADZ87378.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Brucella
melitensis M5-90]
gi|343383270|gb|AEM18762.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Brucella suis
1330]
gi|349743462|gb|AEQ09005.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Brucella
melitensis NI]
gi|358258695|gb|AEU06430.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Brucella suis
VBI22]
Length = 467
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 119/244 (48%), Gaps = 14/244 (5%)
Query: 46 LAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVE 105
+A+TGTNGKST + ++ G + +GGN+G + P +F V VE
Sbjct: 117 IAITGTNGKSTTTALIAHIIKATGRDMQLGGNIGTAI------LTLEPPCADRFYV--VE 168
Query: 106 VSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFGN 165
SSYQ+++ PT ++LNLTPDHL+RH +M+NYA K L + +G+
Sbjct: 169 CSSYQIDL-APSLNPTAGILLNLTPDHLDRHGSMENYAAIKERLVAASGTAIIGIDDAYC 227
Query: 166 QHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQL-QLHNM-KVMGRHNY 223
Q + + + G + I + A A G + ++ L + + G HN
Sbjct: 228 QAIADRLHGAGIRVVRISKEKHLDRGYFADGAKLLWAQDGEIDEIASLEGIGSLRGAHNA 287
Query: 224 HNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEAT 283
NA A ++ L G+ +E +++ ++ HRM+ V R + V +V+DSKATN EAT
Sbjct: 288 QNALAAIVAC--LSAGLSLEEIHAGLKSFPGLAHRMEQVGRRGK-VLFVNDSKATNAEAT 344
Query: 284 CTGL 287
L
Sbjct: 345 APAL 348
>gi|336426146|ref|ZP_08606159.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Lachnospiraceae
bacterium 3_1_57FAA_CT1]
gi|336011104|gb|EGN41072.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Lachnospiraceae
bacterium 3_1_57FAA_CT1]
Length = 385
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 132/263 (50%), Gaps = 22/263 (8%)
Query: 44 KILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAV 103
K++A+TGTNGK+T GQ++ FV GN+GNP + A + + V V
Sbjct: 109 KVIAITGTNGKTTTTALTGQIMRDYYESVFVVGNIGNPYTLEALNT-------REDSVTV 161
Query: 104 VEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPF 163
E+SS+Q+E F P+VS VLN+TPDHL RH TM+NYA K + + +L +
Sbjct: 162 AEISSFQLETTVD-FHPSVSAVLNITPDHLNRHHTMENYAAVKESITKNQTKEDTCVLNY 220
Query: 164 GNQHLNEAIKGHRFNLAWIGAFP----GVKIDTEAKTASFEVPAVGVVSQ-LQLHNMKVM 218
+ + + ++ W + G ++ E SF GV + L ++ MK++
Sbjct: 221 EDPYTRAFGERCPASVIWFSSADKLAEGYYLEGEDIIRSFG----GVTEKLLNINEMKLI 276
Query: 219 GRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKAT 278
G HN N V A + GV + + +T++ + HR++ V GV + +DSK T
Sbjct: 277 GTHNVEN--VMAAIAMSAAYGVPMANIINTVKHFQAVEHRIEYVAEK-DGVVYYNDSKGT 333
Query: 279 NLEATCTGLMDLKGHKCVILLGG 301
N +A G+ + ++ IL+GG
Sbjct: 334 NPDAAIKGIRAM--NRPTILIGG 354
>gi|322391625|ref|ZP_08065094.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Streptococcus
peroris ATCC 700780]
gi|321145708|gb|EFX41100.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Streptococcus
peroris ATCC 700780]
Length = 450
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 139/300 (46%), Gaps = 29/300 (9%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L+ G V +E++ A + I+ +TG+NGK+T T +GQ+L G + GN+G P
Sbjct: 93 LEKGMPVWTEVELAYLI--SEAPIVGITGSNGKTTTTTMIGQVLTAAGQNGLLSGNIGYP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S H + K V+E+SS+Q+ + + F P ++V+ NL P H++ H + +
Sbjct: 151 AS----HVAQTATDKDTL---VMELSSFQL-MGIESFHPEIAVITNLMPTHIDYHGSFEA 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGN---QHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTAS 198
Y K ++ +M +L F + L E + + + G + E
Sbjct: 203 YVAAKWNIQKNMTAADYLVLNFNQDLAKELAEKTQASVVPFSTLEKVDGAYL--ENGLLY 260
Query: 199 FEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHR 258
F AV + + V G HN N A+A ++V + GVD E + T+ HR
Sbjct: 261 FRGEAV-----MAADEIGVPGSHNVEN-ALATIAVAKIR-GVDNETIKETLSAFGGVKHR 313
Query: 259 MQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
+Q +I GV + +DSK+TN+ AT L K +++ GG + N F++L+
Sbjct: 314 LQYAD-EINGVKFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------GNEFDELV 366
>gi|62290326|ref|YP_222119.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Brucella
abortus bv. 1 str. 9-941]
gi|82700250|ref|YP_414824.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Brucella
melitensis biovar Abortus 2308]
gi|189024559|ref|YP_001935327.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Brucella
abortus S19]
gi|237815833|ref|ZP_04594830.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Brucella abortus
str. 2308 A]
gi|260546868|ref|ZP_05822607.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Brucella abortus
NCTC 8038]
gi|260755155|ref|ZP_05867503.1| D-glutamic acid-adding enzyme [Brucella abortus bv. 6 str. 870]
gi|260758374|ref|ZP_05870722.1| D-glutamic acid-adding enzyme [Brucella abortus bv. 4 str. 292]
gi|260762200|ref|ZP_05874543.1| D-glutamic acid-adding enzyme [Brucella abortus bv. 2 str. 86/8/59]
gi|260884168|ref|ZP_05895782.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Brucella abortus
bv. 9 str. C68]
gi|297248713|ref|ZP_06932431.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Brucella abortus
bv. 5 str. B3196]
gi|376272833|ref|YP_005151411.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Brucella abortus
A13334]
gi|423166492|ref|ZP_17153195.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Brucella abortus
bv. 1 str. NI435a]
gi|423171133|ref|ZP_17157808.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Brucella abortus
bv. 1 str. NI474]
gi|423172784|ref|ZP_17159455.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Brucella abortus
bv. 1 str. NI486]
gi|423178522|ref|ZP_17165166.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Brucella abortus
bv. 1 str. NI488]
gi|423180563|ref|ZP_17167204.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Brucella abortus
bv. 1 str. NI010]
gi|423183695|ref|ZP_17170332.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Brucella abortus
bv. 1 str. NI016]
gi|423185365|ref|ZP_17171979.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Brucella abortus
bv. 1 str. NI021]
gi|423188500|ref|ZP_17175110.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Brucella abortus
bv. 1 str. NI259]
gi|75496533|sp|Q57C76.1|MURD_BRUAB RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|118595643|sp|Q2YM69.1|MURD_BRUA2 RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|62196458|gb|AAX74758.1| MurD, UDP-N-acetylmuramoylalanine--D-glutamate ligase [Brucella
abortus bv. 1 str. 9-941]
gi|82616351|emb|CAJ11408.1| Cytoplasmic peptidoglycan synthetases, N-terminal:Pyridine
nucleotide-disulphide oxidoreductase, class
I:Folylpolyglutamate s [Brucella melitensis biovar
Abortus 2308]
gi|189020131|gb|ACD72853.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Brucella
abortus S19]
gi|237789131|gb|EEP63342.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Brucella abortus
str. 2308 A]
gi|260095918|gb|EEW79795.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Brucella abortus
NCTC 8038]
gi|260668692|gb|EEX55632.1| D-glutamic acid-adding enzyme [Brucella abortus bv. 4 str. 292]
gi|260672632|gb|EEX59453.1| D-glutamic acid-adding enzyme [Brucella abortus bv. 2 str. 86/8/59]
gi|260675263|gb|EEX62084.1| D-glutamic acid-adding enzyme [Brucella abortus bv. 6 str. 870]
gi|260873696|gb|EEX80765.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Brucella abortus
bv. 9 str. C68]
gi|297175882|gb|EFH35229.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Brucella abortus
bv. 5 str. B3196]
gi|363400439|gb|AEW17409.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Brucella abortus
A13334]
gi|374538467|gb|EHR09975.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Brucella abortus
bv. 1 str. NI474]
gi|374543976|gb|EHR15454.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Brucella abortus
bv. 1 str. NI435a]
gi|374544303|gb|EHR15780.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Brucella abortus
bv. 1 str. NI486]
gi|374545303|gb|EHR16766.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Brucella abortus
bv. 1 str. NI488]
gi|374548094|gb|EHR19546.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Brucella abortus
bv. 1 str. NI010]
gi|374548523|gb|EHR19971.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Brucella abortus
bv. 1 str. NI016]
gi|374559062|gb|EHR30451.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Brucella abortus
bv. 1 str. NI259]
gi|374560075|gb|EHR31458.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Brucella abortus
bv. 1 str. NI021]
Length = 467
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 119/244 (48%), Gaps = 14/244 (5%)
Query: 46 LAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVE 105
+A+TGTNGKST + ++ G + +GGN+G + P +F V VE
Sbjct: 117 IAITGTNGKSTTTALIAHIIKATGRDMQLGGNIGTAI------LTLEPPCADRFYV--VE 168
Query: 106 VSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFGN 165
SSYQ+++ PT ++LNLTPDHL+RH +M+NYA K L + +G+
Sbjct: 169 CSSYQIDL-APSLNPTAGILLNLTPDHLDRHGSMENYAAIKERLVAASGTAIIGIDDAYC 227
Query: 166 QHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQL-QLHNM-KVMGRHNY 223
Q + + + G + I + A A G + ++ L + + G HN
Sbjct: 228 QAIADRLHGAGIRVVRISKEKHLDRGYFADGAKLLWAQDGEIDEIASLEGIGSLRGAHNA 287
Query: 224 HNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEAT 283
NA A ++ L G+ +E +++ ++ HRM+ V R + V +V+DSKATN EAT
Sbjct: 288 QNALAAIVAC--LSAGLSLEEIHAGLKSFPGLAHRMEQVGRRGK-VLFVNDSKATNAEAT 344
Query: 284 CTGL 287
L
Sbjct: 345 APAL 348
>gi|294852759|ref|ZP_06793432.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Brucella sp. NVSL
07-0026]
gi|294821348|gb|EFG38347.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Brucella sp. NVSL
07-0026]
Length = 467
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 119/244 (48%), Gaps = 14/244 (5%)
Query: 46 LAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVE 105
+A+TGTNGKST + ++ G + +GGN+G + P +F V VE
Sbjct: 117 IAITGTNGKSTTTALIAHIIKATGRDMQLGGNIGTAI------LTLEPPCADRFYV--VE 168
Query: 106 VSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFGN 165
SSYQ+++ PT ++LNLTPDHL+RH +M+NYA K L + +G+
Sbjct: 169 CSSYQIDLAPS-LNPTAGILLNLTPDHLDRHGSMENYAAIKERLVAASGTAIIGIDDAYC 227
Query: 166 QHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQL-QLHNM-KVMGRHNY 223
Q + + + G + I + A A G + ++ L + + G HN
Sbjct: 228 QAIADRLHGAGIRVVRISKEKHLDRGYFADGAKLLWAQDGEIDEIASLEGIGSLRGAHNA 287
Query: 224 HNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEAT 283
NA A ++ L G+ +E +++ ++ HRM+ V R + V +V+DSKATN EAT
Sbjct: 288 QNALAAIVAC--LSAGLSLEEIHAGLKSFPGLAHRMEQVGRRGK-VLFVNDSKATNAEAT 344
Query: 284 CTGL 287
L
Sbjct: 345 APAL 348
>gi|422846166|ref|ZP_16892849.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Streptococcus
sanguinis SK72]
gi|325688217|gb|EGD30236.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Streptococcus
sanguinis SK72]
Length = 459
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 133/282 (47%), Gaps = 31/282 (10%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+ +TG+NGK+T T + Q L G + GN+G P S+ A SSK V+
Sbjct: 123 IIGITGSNGKTTTTTMIAQALTAGGQNGLLSGNIGYPASQVAQTA----SSKDTL---VM 175
Query: 105 EVSSYQ-MEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPF 163
E+SS+Q M I + F P ++V+ NL P HL+ H +++ YA K ++ +M +L F
Sbjct: 176 ELSSFQLMGIED--FHPQIAVITNLMPTHLDYHGSVEGYAAAKWNIQKNMTADDYLVLNF 233
Query: 164 GNQHLNEAIKGHRFNLAWIGAFPGV-KIDT---EAKTASFEVPAVGVVSQLQLHNMKVMG 219
E + A + F K+D E +F A+ +Q + V G
Sbjct: 234 NQDWAKEMASQTQ---ATVVPFSTTEKVDGAYLEGDVLTFRGEAI-----MQAAEIGVPG 285
Query: 220 RHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATN 279
HN N A+A ++V L G+D + + + HR+Q V R + V + +DSK+TN
Sbjct: 286 SHNVEN-ALATIAVAKLR-GIDNQTIKEVLSAFGGVKHRLQYVGR-VNEVAFYNDSKSTN 342
Query: 280 LEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPL 321
+ AT L K +++ GG + N F++L+ L
Sbjct: 343 ILATQKALSGFDNSKVILIAGGLDR------GNEFDELVPDL 378
>gi|262195186|ref|YP_003266395.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Haliangium
ochraceum DSM 14365]
gi|262078533|gb|ACY14502.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Haliangium
ochraceum DSM 14365]
Length = 490
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 135/310 (43%), Gaps = 30/310 (9%)
Query: 23 QSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVG---QMLNHLGI-EAFVGGNL 78
+G V++E++ A + + +++A+TGTNGKST G Q + G F GGNL
Sbjct: 94 DAGAEVIAEIELAYRCLHPEAQLIAITGTNGKSTTTALTGALCQAASDAGAPPTFCGGNL 153
Query: 79 GN-PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK 137
GN PL EA H P++ V V EV+ + +E F P V+ LN+T DHL+R+
Sbjct: 154 GNHPLIEAVDH----PANTAGGFV-VAEVAGFMLET-CAGFRPNVAACLNITEDHLDRYG 207
Query: 138 TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFP----------G 187
TM YA K ++ + N H + G + + F G
Sbjct: 208 TMDVYASMKTRVYRWQRADDFAI---ANAHCARTLAGAQAAAGRVLVFDAEAPLPPGTCG 264
Query: 188 VKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNS 247
+ E A G + ++ ++G+HN NA A L+ +GV +A+ +
Sbjct: 265 AYLSPERDEIVLRPEADGPEHRFPAADLPLIGQHNLENAMAAYLAA--HLVGVSDDAIRA 322
Query: 248 TIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLN 307
R HRM+ V + V + DDSK TN+ A + V++ GG K
Sbjct: 323 GARSFRPQKHRMERVGEKGE-VVFYDDSKGTNVAAVAASMRGFP-RPAVLIAGGVDK--G 378
Query: 308 GQESNGFEKL 317
G + FE L
Sbjct: 379 GSYAPMFEAL 388
>gi|440738884|ref|ZP_20918406.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Pseudomonas
fluorescens BRIP34879]
gi|447915295|ref|YP_007395863.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Pseudomonas
poae RE*1-1-14]
gi|440380256|gb|ELQ16823.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Pseudomonas
fluorescens BRIP34879]
gi|445199158|gb|AGE24367.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Pseudomonas
poae RE*1-1-14]
Length = 448
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 140/295 (47%), Gaps = 40/295 (13%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+A++G+N KSTV T VG+M G VGGNLG P AL ++ V+
Sbjct: 111 IVAISGSNAKSTVTTLVGEMAAAAGKRVAVGGNLGVP---------ALDLLSDDVELYVM 161
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSH----MVNTKLGL 160
E+SS+Q+E + V+ VLN++ DH++R+ + Y L K +F +VN + L
Sbjct: 162 ELSSFQLETTHD-LGAEVATVLNVSEDHMDRYSGLPAYHLAKHRIFRGARQVVVNRQDAL 220
Query: 161 LPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTE--AKTASFEVPAVGVVSQLQLHNMKVM 218
+ E + F L F G I E K +FE + + + +K+
Sbjct: 221 ---SRPLMGEGLPCWTFGLGKPD-FKGFGIREENGEKYLAFEFEHL-----MPVRELKIR 271
Query: 219 GRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKAT 278
G HN NA A G +G+ +A+ +++ HR Q V RD+ GV++ +DSKAT
Sbjct: 272 GAHNQSNALAALAL--GHAVGLPFDAMLASLRTFGGLEHRCQWV-RDLDGVSYYNDSKAT 328
Query: 279 NLEATCTGL----MDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPLNHH-RCVI 328
N+ A + D+ G K V++ GG K + F+ L P+ H R V+
Sbjct: 329 NVGAALAAIEGLGADIDG-KLVLIAGGDGKGAD------FKDLKAPVAAHCRAVV 376
>gi|429756498|ref|ZP_19289090.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Capnocytophaga
sp. oral taxon 324 str. F0483]
gi|429171239|gb|EKY12873.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Capnocytophaga
sp. oral taxon 324 str. F0483]
Length = 444
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 156/325 (48%), Gaps = 33/325 (10%)
Query: 14 KATGLACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAF 73
KA + + + G V+SE++FA+Q I + +TG+NGK+T + G++
Sbjct: 75 KAPIIKKVHEKGIAVISEIEFASQYTDSLI--VGITGSNGKTTTTLLTHHIFKEAGLQVG 132
Query: 74 VGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHL 133
+GGN+G +E + + P + V+E+SS+Q++ ++F P ++V+LN+TPDHL
Sbjct: 133 LGGNIGYSFAE------LVATENPPYY--VLEISSFQLD-GIEHFAPHIAVLLNITPDHL 183
Query: 134 ERHK-TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDT 192
+R+ +NY +K + + + ++ + + + H I I+
Sbjct: 184 DRYDYKFENYINSKFRIAMNQTENDYLIYDADDEVITQWLSTHTIKSKLI----PFSIEK 239
Query: 193 EAKTASF------EVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALN 246
E +F + +++ + + + G+HN N A SV + + +L
Sbjct: 240 ELPQGAFLKDNKIYIMLENQTTEIDVEEISLRGKHNIKNTMAA--SVAARLVNIRNNSLR 297
Query: 247 STIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVL 306
+++ + PHR++ V + ++GVT+V+DSKATN+ + L +K V ++GGQ K
Sbjct: 298 ESLKGFKGAPHRLEEV-KVVEGVTYVNDSKATNVNSVFYALDTIK-TPIVWIVGGQDK-- 353
Query: 307 NGQESNGFEKLIEPLNHHRCVITEC 331
N + L+ P H + C
Sbjct: 354 ----GNDYNSLL-PYVHEKVRAIVC 373
>gi|398866244|ref|ZP_10621744.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Pseudomonas sp.
GM78]
gi|398241581|gb|EJN27231.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Pseudomonas sp.
GM78]
Length = 448
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 142/295 (48%), Gaps = 40/295 (13%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+A++G+N KSTV T VG+M G VGGNLG P AL ++ V+
Sbjct: 111 IVAISGSNAKSTVTTLVGEMAAAAGKRVAVGGNLGTP---------ALDLLGDDVELYVM 161
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLF----SHMVNTKLGL 160
E+SS+Q+E ++ V+ VLN++ DH++R+ + Y L K +F +VN + L
Sbjct: 162 ELSSFQLETTDQ-LNAEVATVLNISEDHMDRYSGLPAYHLAKHRIFRGARQFVVNRQDAL 220
Query: 161 LPFGNQHLNEAIKGHRFNL--AWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVM 218
+ E F L AF G++ + K +FE + + + +KV
Sbjct: 221 ---SRPLMGEGQPCWTFGLNKPDFKAF-GIREEDGEKYLAFEFQNL-----MPVRELKVR 271
Query: 219 GRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKAT 278
G HN NA A G +G+ +A+ S + HR Q V RD+ GV + +DSKAT
Sbjct: 272 GAHNQSNALAALAL--GHAVGLPFDAMLSALRNFAGLEHRCQWV-RDLDGVGYYNDSKAT 328
Query: 279 NLEATCTGL----MDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPLNHH-RCVI 328
N+ A + D+ G K V++ GG K G E F+ L +P+ + R VI
Sbjct: 329 NVGAALAAIEGLGADIDG-KIVLIAGGDGK---GAE---FKDLRDPVAANCRAVI 376
>gi|378578138|ref|ZP_09826818.1| UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase [Pantoea
stewartii subsp. stewartii DC283]
gi|377819247|gb|EHU02327.1| UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase [Pantoea
stewartii subsp. stewartii DC283]
Length = 438
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 134/283 (47%), Gaps = 63/283 (22%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+A+TG+NGKSTV T VG+M G + VGGN+G P AL K Q+ V+
Sbjct: 107 IVAITGSNGKSTVTTLVGEMAKAAGWQVGVGGNIGLP---------ALSLLKAPAQLYVL 157
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK-TMKNYALTKCHLFSH----MVNTKLG 159
E+SS+Q+E + +LN+T DH++R+ M+ Y K ++ + +VN G
Sbjct: 158 ELSSFQLET-TYSLKAAAATILNVTEDHMDRYPLGMQQYRAAKLRIYENAQVCVVNADDG 216
Query: 160 L---------------LPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAV 204
+ + G+ HLN+ + W+ A G K+
Sbjct: 217 MTMPVRGADARCVSFGIDIGDYHLNK-----QQGSVWLRA-KGEKV-------------- 256
Query: 205 GVVSQLQLHNMKVMGRHNYHN--AAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIV 262
L M ++G+HNY N AA+A +GL + AL + + HR Q+V
Sbjct: 257 -----LNTDEMTLVGQHNYTNALAALALADAVGLPRSTSLSALAAYSGL----AHRFQLV 307
Query: 263 HRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCV-ILLGGQAK 304
H + +GV W++DSKATN+ +T L L+ + +LLGG K
Sbjct: 308 H-ESRGVRWINDSKATNVGSTEAALKGLQVDGTLWLLLGGDGK 349
>gi|376275954|ref|YP_005116393.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Brucella canis HSK
A52141]
gi|363404521|gb|AEW14816.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Brucella canis HSK
A52141]
Length = 467
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 119/244 (48%), Gaps = 14/244 (5%)
Query: 46 LAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVE 105
+A+TGTNGKST + ++ G + +GGN+G + P +F V VE
Sbjct: 117 IAITGTNGKSTTTALIAHIIKATGRDMQLGGNIGTAI------LTLEPPCADRFYV--VE 168
Query: 106 VSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFGN 165
SSYQ+++ PT ++LNLTPDHL+RH +M+NYA K L + +G+
Sbjct: 169 CSSYQIDL-APSLNPTAGILLNLTPDHLDRHGSMENYAAIKERLVAASGTAIIGIDDAYC 227
Query: 166 QHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQL-QLHNM-KVMGRHNY 223
Q + + + G + I + A A G + ++ L + + G HN
Sbjct: 228 QAIADRLHGAGIRVVRISKEKHLDRGYFADGAKLLWAQDGEIDEIASLEGIGSLRGAHNA 287
Query: 224 HNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEAT 283
NA A ++ L G+ +E +++ ++ HRM+ V R + V +V+DSKATN EAT
Sbjct: 288 QNALAAIVAC--LSAGLSLEEIHAGLKSFPGLAHRMEQVGRRGK-VLFVNDSKATNAEAT 344
Query: 284 CTGL 287
L
Sbjct: 345 APAL 348
>gi|320546319|ref|ZP_08040638.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Streptococcus
equinus ATCC 9812]
gi|320449040|gb|EFW89764.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Streptococcus
equinus ATCC 9812]
Length = 451
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 140/298 (46%), Gaps = 37/298 (12%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V++E++ A + I+ +TG+NGK+T T + + LN+ G + GN+G P SE A
Sbjct: 99 VITEVELAYMI--SDAPIIGITGSNGKTTTTTMIAETLNNGGQSGLLSGNIGFPASEVA- 155
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
+ V+E+SS+Q+ + F P ++V+ NL P H++ H T +NY + K
Sbjct: 156 ------QTATDKDTLVMELSSFQL-MGTDTFHPHIAVITNLMPTHIDYHGTFENYVVAKW 208
Query: 148 HLFSHMVNTKLGLLPFGN---QHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAV 204
++ +M +L F + L E + G +D + T F+ A+
Sbjct: 209 NIQKNMTADDFIVLNFNQDLAKELAEKTAAQVVPFSTTEKVDGAYLDGD--TLYFKGEAI 266
Query: 205 GVVSQLQLHNMKVMGRHNYHNA----AVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQ 260
++ + V G HN NA AVA LS G+ EA+ T+ HR+Q
Sbjct: 267 -----MKASEIGVPGSHNVENALATIAVAKLS------GIANEAIKETLSHFGGVKHRLQ 315
Query: 261 IVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
+ ++ GV + +DSK+TN+ AT L K +++ GG + N F++L+
Sbjct: 316 ALG-EVNGVKFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------GNEFDELV 366
>gi|225627884|ref|ZP_03785920.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Brucella ceti str.
Cudo]
gi|261219196|ref|ZP_05933477.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Brucella ceti
M13/05/1]
gi|261315608|ref|ZP_05954805.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Brucella
pinnipedialis M163/99/10]
gi|261318046|ref|ZP_05957243.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Brucella
pinnipedialis B2/94]
gi|261322257|ref|ZP_05961454.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Brucella ceti
M644/93/1]
gi|261758612|ref|ZP_06002321.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Brucella sp. F5/99]
gi|265989077|ref|ZP_06101634.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Brucella
pinnipedialis M292/94/1]
gi|340791041|ref|YP_004756506.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Brucella
pinnipedialis B2/94]
gi|225617047|gb|EEH14093.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Brucella ceti str.
Cudo]
gi|260924285|gb|EEX90853.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Brucella ceti
M13/05/1]
gi|261294947|gb|EEX98443.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Brucella ceti
M644/93/1]
gi|261297269|gb|EEY00766.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Brucella
pinnipedialis B2/94]
gi|261304634|gb|EEY08131.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Brucella
pinnipedialis M163/99/10]
gi|261738596|gb|EEY26592.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Brucella sp. F5/99]
gi|264661274|gb|EEZ31535.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Brucella
pinnipedialis M292/94/1]
gi|340559500|gb|AEK54738.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Brucella
pinnipedialis B2/94]
Length = 467
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 119/244 (48%), Gaps = 14/244 (5%)
Query: 46 LAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVE 105
+A+TGTNGKST + ++ G + +GGN+G + P +F V VE
Sbjct: 117 IAITGTNGKSTTTALIAHIIKATGRDMQLGGNIGTAI------LTLEPPCADRFYV--VE 168
Query: 106 VSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFGN 165
SSYQ+++ PT ++LNLTPDHL+RH +M+NYA K L + +G+
Sbjct: 169 CSSYQIDL-APSLNPTAGILLNLTPDHLDRHGSMENYAAIKERLVAASGTAIIGIDDAYC 227
Query: 166 QHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQL-QLHNM-KVMGRHNY 223
Q + + + G + I + A A G + ++ L + + G HN
Sbjct: 228 QAIADRLHGAGIRVVRISKEKHLDRGYFADGAKLLWAQDGEIDEIASLEGIGSLRGAHNA 287
Query: 224 HNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEAT 283
NA A ++ L G+ +E +++ ++ HRM+ V R + V +V+DSKATN EAT
Sbjct: 288 QNALAAIVAC--LSAGLSLEEIHAGLKSFPGLAHRMEQVGRRGK-VLFVNDSKATNAEAT 344
Query: 284 CTGL 287
L
Sbjct: 345 APAL 348
>gi|433446203|ref|ZP_20410262.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Anoxybacillus
flavithermus TNO-09.006]
gi|432000499|gb|ELK21393.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Anoxybacillus
flavithermus TNO-09.006]
Length = 444
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 137/304 (45%), Gaps = 27/304 (8%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V++E++ A + I+ +TG+NGK+T T + ML + GN+G E A
Sbjct: 93 VITEVEIAYET--SKAPIIGITGSNGKTTTTTLIYHMLQEAKRWPLIAGNIGTVACEVAK 150
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
K V V+E+SS+Q+ + F P ++V+LN+ HL+ H T + YA K
Sbjct: 151 RAT-------KDDVIVMELSSFQL-LGTIRFRPHIAVLLNIFDAHLDYHGTKEAYAEAKG 202
Query: 148 HLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVV 207
++F + T ++ + + + K R A + K + ++
Sbjct: 203 NIFKNQTETDYAVVNADDPIVMQLAKKSRAQHVPFSATTPLSYGATVKEGAIYFHDERII 262
Query: 208 SQLQLHNMKVMGRHNYHN--AAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRD 265
+ ++ + G HN N AAVAA + G D EA+ + PHR+Q V +
Sbjct: 263 D---VTDVALRGAHNIENILAAVAATKL----AGADNEAIRRVLTTFTGVPHRLQFV-AE 314
Query: 266 IQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPLNHHR 325
I G + +DSKATN+ AT L H+ VILL G N F++L+ H +
Sbjct: 315 INGRKFYNDSKATNILATQKALSAF--HEPVILLAGGL-----DRGNEFDELLPYFKHVK 367
Query: 326 CVIT 329
VIT
Sbjct: 368 AVIT 371
>gi|261222575|ref|ZP_05936856.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Brucella ceti
B1/94]
gi|265998540|ref|ZP_06111097.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Brucella ceti
M490/95/1]
gi|260921159|gb|EEX87812.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Brucella ceti
B1/94]
gi|262553164|gb|EEZ08998.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Brucella ceti
M490/95/1]
Length = 467
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 119/244 (48%), Gaps = 14/244 (5%)
Query: 46 LAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVE 105
+A+TGTNGKST + ++ G + +GGN+G + P +F V VE
Sbjct: 117 IAITGTNGKSTTTALIAHIIKATGRDMQLGGNIGTAI------LTLEPPCADRFYV--VE 168
Query: 106 VSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFGN 165
SSYQ+++ PT ++LNLTPDHL+RH +M+NYA K L + +G+
Sbjct: 169 CSSYQIDL-APSLNPTAGILLNLTPDHLDRHGSMENYAAIKERLVAASGTAIIGIDDAYC 227
Query: 166 QHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQL-QLHNM-KVMGRHNY 223
Q + + + G + I + A A G + ++ L + + G HN
Sbjct: 228 QAIADRLHGAGIRVVRISKEKHLDRGYFADGAKLLWAQDGEIDEIASLEGIGSLRGAHNA 287
Query: 224 HNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEAT 283
NA A ++ L G+ +E +++ ++ HRM+ V R + V +V+DSKATN EAT
Sbjct: 288 QNALAAIVAC--LSAGLSLEEIHAGLKSFPGLAHRMEQVGRRGK-VLFVNDSKATNAEAT 344
Query: 284 CTGL 287
L
Sbjct: 345 APAL 348
>gi|419494986|ref|ZP_14034706.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA47461]
gi|421206135|ref|ZP_15663199.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae 2090008]
gi|421229341|ref|ZP_15686018.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae 2061376]
gi|421291494|ref|ZP_15742234.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA56348]
gi|421302502|ref|ZP_15753167.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA17484]
gi|421311439|ref|ZP_15762046.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA58981]
gi|379597350|gb|EHZ62153.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA47461]
gi|395577215|gb|EJG37760.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae 2090008]
gi|395598326|gb|EJG58531.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae 2061376]
gi|395894796|gb|EJH05773.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA56348]
gi|395903316|gb|EJH14248.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA17484]
gi|395912017|gb|EJH22880.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae GA58981]
Length = 450
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 145/297 (48%), Gaps = 23/297 (7%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L G V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LAKGIPVLTEVELAYLI--SEAPIIGITGSNGKTTTTTMIGEVLTAAGQHGLLSGNIGYP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A + + K V+E+SS+Q+ + + F P ++V+ NL P H++ H +
Sbjct: 151 ASQVA----QIATDK---NTLVMELSSFQL-MGVQEFHPEIAVITNLMPTHIDYHGLFEE 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEV 201
Y K ++ + M +L F NQ L + + A + F ++ A ++
Sbjct: 203 YVAAKWNIQNKMTAADFLVLNF-NQDLAKDLASK--TEATVVPFSTLEKVDGAYLEDGQL 259
Query: 202 PAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQI 261
G V + + + V G HN N A+A ++V L VD + + T+ HR+Q
Sbjct: 260 YFRGEVV-MAANEIGVPGSHNVEN-ALATIAVAKLR-DVDNQTIKETLSAFGGVKHRLQF 316
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
V DI+GV + +DSK+TN+ AT L K V++ GG + N F++L+
Sbjct: 317 VD-DIKGVKFYNDSKSTNILATQKALSGFDNSKVVLIAGGLDR------GNEFDELV 366
>gi|384228224|ref|YP_005619959.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Buchnera
aphidicola str. Ua (Uroleucon ambrosiae)]
gi|345539157|gb|AEO08024.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Buchnera aphidicola
str. Ua (Uroleucon ambrosiae)]
Length = 439
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 146/306 (47%), Gaps = 51/306 (16%)
Query: 25 GKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSE 84
G ++S+++ A+ + ++ ++A+TGTNGKSTV T + ++ + G +GGN+G P+
Sbjct: 90 GIEIISDIELFAREV--TVPVIAITGTNGKSTVATMITKIAKYSGFHVLLGGNIGLPV-- 145
Query: 85 AAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDHLERH-KTMKNY 142
L K + ++E+SS+Q+E N + ++V+LN+ DH+ R+ + + Y
Sbjct: 146 -------LDILHKKTDLYIIELSSFQLE--NTFNLKAKIAVILNIYKDHINRYPEGFEQY 196
Query: 143 ALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVP 202
TK +F H +T + N L + ++ N G K++ + +
Sbjct: 197 KNTKLSIF-HQADT---CIINSNDQLENILYKNKKNFISFG----------KKSSDYYIC 242
Query: 203 AVGVVSQLQLHNMKVM--------GRHNYHN--AAVAALSVLGLDIGVDVEALNSTIEIL 252
+ L N K++ G HNY+N ++A + + AL + +
Sbjct: 243 STSNAYILCYKNQKILNSSELLLSGYHNYNNVLVSIAIADAMKFSRKNTIYALKKFVSL- 301
Query: 253 RTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCV-ILLGGQAKVLNGQES 311
PHR Q + + G+ W++DSK+TN+ +T L LK + +LLGG +K S
Sbjct: 302 ---PHRFQTIKNE-NGINWINDSKSTNVNSTEAALNALKIKGTIHLLLGGDSK------S 351
Query: 312 NGFEKL 317
N F+ L
Sbjct: 352 NTFDIL 357
>gi|187735162|ref|YP_001877274.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Akkermansia
muciniphila ATCC BAA-835]
gi|187425214|gb|ACD04493.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Akkermansia
muciniphila ATCC BAA-835]
Length = 436
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 133/269 (49%), Gaps = 31/269 (11%)
Query: 44 KILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAV 103
+I+A+TGTNGK+T + V ++L G A GN G P++E I L S P V
Sbjct: 103 RIIAITGTNGKTTTTSLVEKILLRAGKTAVACGNYGVPVAE-----ILLRDSVP--DVLA 155
Query: 104 VEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPF 163
+EVSS+Q+E + F P V+V LN PDH++R+K++++Y K H+F + L ++
Sbjct: 156 LEVSSFQLET-IRDFHPDVAVWLNFAPDHMDRYKSVEDYHRAKLHIFDNQTEKDLAVVRS 214
Query: 164 GNQ--HLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAV--GVVSQLQLHNMKVMG 219
G + HL ++ L + P + + P + G L L +
Sbjct: 215 GERLPHLKASV------LTFSPEDPAADL-------YYRGPLILEGGAPLLNLEGTTLNQ 261
Query: 220 RHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATN 279
RHN NA A L+ L G+ E ++ P HR + V R + GV W++DSKATN
Sbjct: 262 RHNAENAMAAVLACRHL--GIPAETAAEVLKEFAPPGHRCETV-RTLDGVLWLNDSKATN 318
Query: 280 LEATCTGLMDLKGHKCVILL-GGQAKVLN 307
L A L H VIL+ GG+ K L+
Sbjct: 319 LHALEAALK--SQHSPVILIAGGKDKGLD 345
>gi|406942300|gb|EKD74566.1| hypothetical protein ACD_44C00400G0008 [uncultured bacterium]
Length = 441
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 139/293 (47%), Gaps = 47/293 (16%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+A+TG+N K TV T VG ML+ + VGGN+G P + L + P+F V+
Sbjct: 104 IIAITGSNAKGTVTTLVGNMLSAANRKGLVGGNIGVPALD------LLTNPPPEFY--VL 155
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFG 164
E+SS+Q+E + + VLN++PDHL+RH T++NY +K ++ N K +
Sbjct: 156 ELSSFQLET-TQSLKAHAATVLNISPDHLDRHLTLENYISSKQRIYK---NCKTAIY--- 208
Query: 165 NQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLH----------N 214
+ ++A I + K T ++ F+ + +++ L
Sbjct: 209 ----------NGDDMATIPHYSVSKKITFGASSEFDFHLLSEKNEIYLAEHHEKLLPVIE 258
Query: 215 MKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDD 274
+K+ G+HN+ NA A +D+ +A + ++ PHR Q + ++ GV W DD
Sbjct: 259 LKISGKHNWLNALAALALASTMDL--PRQAKLTALQTFSGLPHRCQWLG-NLNGVHWYDD 315
Query: 275 SKATNLEATCT---GLMDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPLNHH 324
SK TN+ +T GL K +++ GG K + FE L EP+ H
Sbjct: 316 SKGTNIGSTLAAIQGLGTTTSGKIILIAGGVGKGAD------FELLKEPVLSH 362
>gi|238761555|ref|ZP_04622530.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Yersinia
kristensenii ATCC 33638]
gi|238700069|gb|EEP92811.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Yersinia
kristensenii ATCC 33638]
Length = 444
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 129/263 (49%), Gaps = 17/263 (6%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
++A+TG+NGKSTV T VG+M G + VGGN+G P A L S K + Q+ V+
Sbjct: 107 VVAITGSNGKSTVTTLVGEMAKAAGWQVGVGGNIGVP---ALTLLQQLASQKQENQLVVL 163
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK-TMKNYALTKCHLFSHMVNTKLGLLPF 163
E+SS+Q+E + + + +LN+T DH +R+ ++ Y K ++ N K+ ++
Sbjct: 164 ELSSFQLETTSSLRA-SAATLLNVTEDHTDRYPFGLQQYRAAKLRVYE---NAKVCVVN- 218
Query: 164 GNQHLNEAIKGHRFNLAWIGAFPG-VKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHN 222
+ L ++G G G ++ + V V L MK+ GRHN
Sbjct: 219 ADDALTMPVRGADSRCISFGVDVGDYHLNKQQGEIWLRVRGEKV---LNTREMKLSGRHN 275
Query: 223 YHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEA 282
Y NA A +G+ + + + PHR Q+V + GV W++DSKATN+ +
Sbjct: 276 YTNALAALALA--DAVGIPRSSSLTALTTFTGLPHRFQLVL-ERNGVRWINDSKATNVGS 332
Query: 283 TCTGLMDLKGHKCV-ILLGGQAK 304
T L L+ + +LLGG K
Sbjct: 333 TEAALDGLQVDGTLHLLLGGDGK 355
>gi|398859371|ref|ZP_10615048.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Pseudomonas sp.
GM79]
gi|398237066|gb|EJN22829.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Pseudomonas sp.
GM79]
Length = 448
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 143/295 (48%), Gaps = 40/295 (13%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+A++G+N KSTV T VG+M G VGGNLG P AL ++ V+
Sbjct: 111 IVAISGSNAKSTVTTLVGEMAAAAGKRVAVGGNLGTP---------ALDLLSDDIELYVM 161
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLF----SHMVNTKLGL 160
E+SS+Q+E ++ V+ VLN++ DH++R+ + Y L K +F +VN + L
Sbjct: 162 ELSSFQLETTDQ-LNAEVATVLNISEDHMDRYSGLPAYHLAKHRIFRGARQFVVNRQDAL 220
Query: 161 LPFGNQHLNEAIKGHRFNL--AWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVM 218
+ E F L AF G++ + K +FE + + + +KV
Sbjct: 221 ---SRPLMGEGQPCWTFGLNKPDFKAF-GIREEDGEKYLAFEFQNL-----MPVRELKVR 271
Query: 219 GRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKAT 278
G HN NA A G +G+ +A+ S + HR Q V R++ GV++ +DSKAT
Sbjct: 272 GAHNQSNALAALAL--GHAVGLPFDAMLSALRNFAGLEHRCQWV-RELNGVSYYNDSKAT 328
Query: 279 NLEATCTGL----MDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPLNHH-RCVI 328
N+ A + D+ G K V++ GG K G E F+ L +P+ + R VI
Sbjct: 329 NVGAALAAIEGLGADIDG-KLVLIAGGDGK---GAE---FKDLRDPVAANCRAVI 376
>gi|398993485|ref|ZP_10696434.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Pseudomonas sp.
GM21]
gi|398134671|gb|EJM23812.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Pseudomonas sp.
GM21]
Length = 448
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 91/295 (30%), Positives = 142/295 (48%), Gaps = 40/295 (13%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+A++G+N KSTV T VG+M G VGGNLG P AL ++ V+
Sbjct: 111 IVAISGSNAKSTVTTLVGEMAAAAGKRVAVGGNLGTP---------ALDLLSDDIELYVM 161
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLF----SHMVNTKLGL 160
E+SS+Q+E ++ V+ VLN++ DH++R+ + Y L K +F +VN + L
Sbjct: 162 ELSSFQLETTDQ-LNAEVATVLNVSEDHMDRYSGLPAYHLAKHRIFRGARQFVVNRQDAL 220
Query: 161 LPFGNQHLNEAIKGHRFNLAW--IGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVM 218
+ E F L AF G++ + K +FE + + + +K+
Sbjct: 221 ---SRPLMGEGQPCWTFGLGKPDFKAF-GIREEEGEKYLAFEFQNL-----MPVRELKIR 271
Query: 219 GRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKAT 278
G HN NA A G +G+ +A+ + + HR Q V RD+ GV + +DSKAT
Sbjct: 272 GAHNQSNALAALAL--GHAVGLPFDAMLTALRSFAGLEHRCQWV-RDLDGVGYYNDSKAT 328
Query: 279 NLEATCTGL----MDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPLNHH-RCVI 328
N+ A + D++G K V++ GG K G E F L +P+ + R VI
Sbjct: 329 NVGAALAAIEGLGADIEG-KIVLIAGGDGK---GAE---FNDLRDPVAANCRAVI 376
>gi|187251915|ref|YP_001876397.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Elusimicrobium
minutum Pei191]
gi|226711909|sp|B2KEW4.1|MURD_ELUMP RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|186972075|gb|ACC99060.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Elusimicrobium
minutum Pei191]
Length = 452
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 142/283 (50%), Gaps = 21/283 (7%)
Query: 29 MSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHL------GIEAFVGGNLGNPL 82
SE++ + +P+ +I AVTGTNGK+T + ++L F GN+G PL
Sbjct: 94 FSEIEISISFLPKGCRIFAVTGTNGKTTTTMLLSEILKQFIKNKEFNKNVFTVGNIGCPL 153
Query: 83 SEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNY 142
+E S + + V+EVSSYQ+E + YF P + +LN+TPDH++ H + K Y
Sbjct: 154 AEVM-------SEIKQHDLIVMEVSSYQLE-DSSYFKPYAATILNITPDHIDHHGSFKKY 205
Query: 143 ALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVP 202
K +F + ++ +++ +A K + L P +I + ++
Sbjct: 206 LDAKSKIFKFQTQKDIAVINSADKNCLKAAKNIKSKLYGFATTPLQQIRSH---VFYDGD 262
Query: 203 AVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIV 262
+ + ++ K+ G HN NA A+L L GVD +++ +T HR++++
Sbjct: 263 ELVFSAGERISPPKLPGIHNVENAMAASLLALAA--GVDSQSIQQAFNKFKTVEHRIELL 320
Query: 263 HRDIQGVTWVDDSKATNLEATCTGLMDL-KGHKCVILLGGQAK 304
+G+++++DSKATN+++T L + G K ++LGGQ K
Sbjct: 321 GIK-KGISFINDSKATNIDSTIIALRSMPDGKKTWLILGGQDK 362
>gi|331266779|ref|YP_004326409.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Streptococcus
oralis Uo5]
gi|326683451|emb|CBZ01069.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase; D-glutamic acid
adding enzyme, MurD [Streptococcus oralis Uo5]
Length = 450
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 144/297 (48%), Gaps = 23/297 (7%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L G V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LAKGIPVLTEVELAYLI--SDAPIIGITGSNGKTTTTTMIGEVLTAAGQRGLLSGNIGYP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A A + V+E+SS+Q+ + + F P ++V+ NL P H++ H + +
Sbjct: 151 ASQVAQTATAQDT-------LVMELSSFQL-MGVQEFHPEIAVITNLMPTHIDYHGSFEE 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEV 201
Y K ++ + M +L F NQ L + + A + F ++ A ++
Sbjct: 203 YVAAKWNIQNKMTADDFLVLNF-NQDLAKELATK--TQATVVPFSTLEKVDGAYLEDGQL 259
Query: 202 PAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQI 261
G V + + V G HN N A+A ++V L GVD + + + HR+Q
Sbjct: 260 YFRGEVV-MAADEIGVPGSHNVEN-ALATIAVAKLR-GVDNQIIKEILSAFGGVKHRLQF 316
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
V +I+GV + +DSK+TN+ AT L K +++ GG + N F++L+
Sbjct: 317 VD-EIKGVKFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------GNEFDELV 366
>gi|320161737|ref|YP_004174962.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Anaerolinea
thermophila UNI-1]
gi|319995591|dbj|BAJ64362.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Anaerolinea
thermophila UNI-1]
Length = 460
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 135/275 (49%), Gaps = 32/275 (11%)
Query: 44 KILAVTGTNGKSTVVTFVGQMLNHLGI---EAFVGGNLGNPLSEAAFHCIALPSSKPKFQ 100
+++ +TG+ GK+T T VG+M + + +A+VGGN+G PL + L +P
Sbjct: 111 RVIGITGSAGKTTTTTLVGRMASRAVVAPQKAWVGGNIGVPLIDR------LDEIQPA-D 163
Query: 101 VAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGL 160
V V+E+SS+Q++ + P V+ VLN+TP+HL+RH TM+ Y K + T + +
Sbjct: 164 VVVLELSSFQLQWITR--SPQVAAVLNITPNHLDRHGTMEAYTAAKARILEFQSATDIAV 221
Query: 161 L---PFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQL------Q 211
L G L E ++G + G+ E K ++ + ++ +
Sbjct: 222 LGREDAGAWGLREKVRGDLISF-------GLNHPAEGKGTFYDNGWLWYQGEMVEEALFE 274
Query: 212 LHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTW 271
+ + G HN N V A +G+ G EAL ++ PHR+++V R+ +GV W
Sbjct: 275 RGKIALRGTHNLLN--VLAACAIGIAAGFPPEALLDGVQGFGGVPHRLELV-REWRGVRW 331
Query: 272 VDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVL 306
+DS AT E T + + V++LGG+ K L
Sbjct: 332 YNDSIATAPERTIAAIRSFE-EPLVLMLGGRDKKL 365
>gi|419766864|ref|ZP_14293039.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
mitis SK579]
gi|383353635|gb|EID31240.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Streptococcus
mitis SK579]
Length = 450
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 148/307 (48%), Gaps = 23/307 (7%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L G V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LAKGIPVLTEVELAYLI--SEAPIIGITGSNGKTTTTTMIGEVLTAAGKHGLLSGNIGYP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A + V+E+SS+Q+ + + F P ++V+ NL P H++ H + +
Sbjct: 151 ASQVA-------QTASDADTLVMELSSFQL-MGIQEFHPEIAVITNLMPTHIDYHGSFEE 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEV 201
Y K ++ + M +L F NQ L + + A + F ++ A ++
Sbjct: 203 YVAAKWNIQNKMTAADFLVLNF-NQDLAKELATK--TQATVVPFSTLEKVDGAYLEDGQL 259
Query: 202 PAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQI 261
G V + + + V G HN N A+A ++V L VD + + T+ HR+Q
Sbjct: 260 YFRGEVV-MAANEIGVPGSHNVEN-ALATITVAKLR-SVDNQTIKETLSAFGGVKHRLQF 316
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPL 321
V +I+G+ + +DSK+TN+ AT L K +++ GG + N F++L+ +
Sbjct: 317 VD-EIKGIKFYNDSKSTNILATQKALSGFDNSKVILIAGGLDR------GNEFDELVPDI 369
Query: 322 NHHRCVI 328
+ V+
Sbjct: 370 TGLKKVV 376
>gi|421235858|ref|ZP_15692459.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae 2071004]
gi|395604777|gb|EJG64909.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
pneumoniae 2071004]
Length = 450
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 145/297 (48%), Gaps = 23/297 (7%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L G V++E++ A + I+ +TG+NGK+T T +G++L G + GN+G P
Sbjct: 93 LAKGIPVLTEVELAYLI--SEAPIIGITGSNGKTTTTTMIGEVLTAAGQHGLLSGNIGYP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S+ A + + K V+E+SS+Q+ + + F P ++V+ NL P H++ H +
Sbjct: 151 ASQVA----QIATDK---NTLVMELSSFQL-MGVQEFHPEIAVITNLMPTHIDYHGLFEE 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEV 201
Y K ++ + M +L F NQ L + + A + F ++ A ++
Sbjct: 203 YVAAKWNIQNKMTAADFLVLNF-NQDLAKDLASK--TEATVVPFSTLEKVDGAYLEDGQL 259
Query: 202 PAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQI 261
G V + + + V G HN N A+A ++V L VD + + T+ HR+Q
Sbjct: 260 YFRGEVV-MAANEIGVPGSHNVEN-ALATIAVAKLR-DVDNQTIKETLSAFGGVKHRLQF 316
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
V DI+GV + +DSK+TN+ AT L K V++ GG + N F++L+
Sbjct: 317 VD-DIKGVKFYNDSKSTNILATQKALSGFDNSKVVLIAGGLDR------GNEFDELV 366
>gi|343492095|ref|ZP_08730468.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Vibrio
nigripulchritudo ATCC 27043]
gi|342827435|gb|EGU61823.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Vibrio
nigripulchritudo ATCC 27043]
Length = 446
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 131/274 (47%), Gaps = 40/274 (14%)
Query: 42 SIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQV 101
S ++A+TG+NGKSTV G M N G + VGGN+G P + +
Sbjct: 112 SKPVVAITGSNGKSTVTDLTGVMANAAGCKTKVGGNIGVPALDLLLEDAD---------L 162
Query: 102 AVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLL 161
V+E+SS+Q+E + + LNLT DH++R+ + Y K +F +N + ++
Sbjct: 163 YVLELSSFQLETTSN-LSLKAAAYLNLTEDHMDRYDDLAAYGNAKQRIF---LNAEKAIV 218
Query: 162 PFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAV--------GVVSQLQLH 213
NQ + H F+ F G + A +++ V G S +
Sbjct: 219 ---NQQDSST---HPFS-----GFDGQVVTFAPSQADYQLKEVEGTTYLSKGEDSFISTS 267
Query: 214 NMKVMGRHNYHNA--AVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTW 271
++ ++G+HN NA A+A L +G++ +AL S + HR Q+V + GVTW
Sbjct: 268 SLSIVGQHNSMNALVAMALLDAVGIEFKKAEDALKSYTGL----THRCQVVAKS-HGVTW 322
Query: 272 VDDSKATNLEATCTGLMDLKGHKCV-ILLGGQAK 304
V+DSKATNL +T L L+ + +L+GG K
Sbjct: 323 VNDSKATNLASTLAALSGLQCDGTLHLLVGGDGK 356
>gi|406947068|gb|EKD78075.1| hypothetical protein ACD_42C00053G0003 [uncultured bacterium]
Length = 451
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 138/276 (50%), Gaps = 48/276 (17%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+A+TG+NGKST+ +G+++ + G +A V GN+G P+ +A + P F VV
Sbjct: 110 IVAITGSNGKSTLTVLMGELIKNAGKKAIVCGNIGLPVLDALMQPV------PDFY--VV 161
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSH----MVNTK--- 157
E+SS+Q++ + TV+VV+N++PDH++R+ T+ +Y +K ++ + +VN
Sbjct: 162 ELSSFQLDTTHS-LTATVAVVINVSPDHMDRYATVDDYRQSKQKIYLNCEHAVVNADEPE 220
Query: 158 -LGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMK 216
L F N L ++ N W G G + + K S V+ L L
Sbjct: 221 IWNSLQFKNLPLEFTLQKPHQN-QW-GLCDGFLVRGDKKVIS--------VTDLLLQQ-- 268
Query: 217 VMGRHNYHN--AAVAALSVLGLDIGVDVEALNSTIEILRT---PPHRMQIVHRDIQGVTW 271
RHN N AA+A S+L L + +E+LR+ HR Q+V + I V W
Sbjct: 269 ---RHNNQNFLAALAMGSILKL-------PMEKMLEVLRSFSGLEHRCQLVKK-INEVAW 317
Query: 272 VDDSKATNLEATCTGLMDLKGHKC---VILLGGQAK 304
+DSKATN+ A + + C ++L GG +K
Sbjct: 318 YNDSKATNVGAAIAAIESMGQSLCGNLILLAGGDSK 353
>gi|254563999|ref|YP_003071094.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Methylobacterium
extorquens DM4]
gi|254271277|emb|CAX27289.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Methylobacterium
extorquens DM4]
Length = 455
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 134/277 (48%), Gaps = 28/277 (10%)
Query: 46 LAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVE 105
+A+TGTNGKST +L H G + +GGN+G A + P++ +V VVE
Sbjct: 117 VAITGTNGKSTTTALTAHLLRHAGRDVQMGGNIGT-----AILSLEPPAAN---RVHVVE 168
Query: 106 VSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFGN 165
+SS+Q+++ P V ++LNLTPDHL+RH TM+NYA K L + +G+
Sbjct: 169 LSSFQIDL-TPSLKPGVGILLNLTPDHLDRHGTMENYAAIKERLVAGADLAVIGVDDPYC 227
Query: 166 QHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHN 225
+ E G R L G D + P V++++ ++G HN N
Sbjct: 228 AAIAERRTGERIRLHVEGHGDAAG-DYVGANGTVRGPDGAVIAEVT-GIQALLGDHNLQN 285
Query: 226 AAVAALSVLGLDI-GVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATC 284
AA A + + L + G ++ A + L HRM+ + R I +V+DSKATN ++T
Sbjct: 286 AAAAVAAAIRLGLSGAEIAAGLKSFPGL---AHRMEPLRR-IGPTLFVNDSKATNADSTE 341
Query: 285 TGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPL 321
L+ + ++ GG+AK E IEPL
Sbjct: 342 KALLAFRDIHWIV--GGKAK----------EGGIEPL 366
>gi|284928909|ref|YP_003421431.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [cyanobacterium
UCYN-A]
gi|284809368|gb|ADB95073.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [cyanobacterium
UCYN-A]
Length = 418
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 121/264 (45%), Gaps = 32/264 (12%)
Query: 60 FVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFC 119
V + + A GN+GN SE A + PS P + + EVSSYQ E ++
Sbjct: 123 LVESIFQKSSLSAVACGNVGNAASELALSKLKNPSI-PNYDWIITEVSSYQCE-SSQTIR 180
Query: 120 PTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNL 179
PT+ + + TPDHL RHKT+ NY K L N K +L + +L+ I H +
Sbjct: 181 PTIGIWTSFTPDHLSRHKTLHNYYSIKASLLK---NCKYQILNNDDNYLH-TISSHSWPN 236
Query: 180 AWIGAFPGVKIDTEAKTASFEVPAVGVVSQ-----------LQLHNMKVMGRHNYHN--A 226
A+ G K D P GV Q ++ KV G HN N
Sbjct: 237 AYWTTIKG-KEDLPCD------PIKGVYVQDGWIVAFGELMFPINLFKVAGLHNQQNLLM 289
Query: 227 AVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTG 286
AVAA + G+D + ++ +E PHR++ V I + +++DSKATN +A G
Sbjct: 290 AVAAAKI----AGIDKKDISLAVENFDGVPHRLEYV-VSIDDIQFINDSKATNYDAAAMG 344
Query: 287 LMDLKGHKCVILLGGQAKVLNGQE 310
L+ ++ +++ GGQ+K N E
Sbjct: 345 LISVES-PAILIAGGQSKEGNDSE 367
>gi|422849181|ref|ZP_16895857.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Streptococcus
sanguinis SK115]
gi|325690202|gb|EGD32206.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Streptococcus
sanguinis SK115]
Length = 459
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 133/282 (47%), Gaps = 31/282 (10%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+ +TG+NGK+T T + Q L G + GN+G P S+ A SSK V+
Sbjct: 123 IIGITGSNGKTTTTTMIAQALTAGGQNGLLSGNIGYPASQVAQTA----SSKDTL---VM 175
Query: 105 EVSSYQ-MEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPF 163
E+SS+Q M I + F P ++V+ NL P HL+ H +++ YA K ++ +M +L F
Sbjct: 176 ELSSFQLMGIED--FHPQIAVITNLMPTHLDYHGSVEGYAAAKWNIQKNMTADDYLVLNF 233
Query: 164 GNQHLNEAIKGHRFNLAWIGAFPGV-KIDT---EAKTASFEVPAVGVVSQLQLHNMKVMG 219
E + A + F K+D E +F A+ +Q + V G
Sbjct: 234 NQDWAKEMASQTQ---ATVVPFSTTEKVDGAYLEGDVLTFRGEAI-----MQAAEIGVPG 285
Query: 220 RHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATN 279
HN N A+A ++V L G+D + + + HR+Q V R + V + +DSK+TN
Sbjct: 286 SHNVEN-ALAMIAVAKLR-GIDNQTIKEVLSAFGGVKHRLQYVGR-VNEVAFYNDSKSTN 342
Query: 280 LEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPL 321
+ AT L K +++ GG + N F++L+ L
Sbjct: 343 ILATQKALSGFDNSKVILIAGGLDR------GNEFDELVPDL 378
>gi|381187413|ref|ZP_09894977.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Flavobacterium
frigoris PS1]
gi|379650541|gb|EIA09112.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Flavobacterium
frigoris PS1]
Length = 443
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 148/295 (50%), Gaps = 20/295 (6%)
Query: 14 KATGLACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAF 73
KA + L++ G V+SE++FAA R+I I +TG+NGK+T V +L G+
Sbjct: 74 KAPIVKKLIERGIPVISEIEFAAP-FTRAITI-GITGSNGKTTTTMLVYHLLKSAGLNVG 131
Query: 74 VGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHL 133
+GGN+G ++ ++ KF V+E+SS+Q++ Y P ++++ N++PDHL
Sbjct: 132 LGGNIGKSFAQQV--------AEDKFDSYVLELSSFQLDGIVDY-KPHIAIITNISPDHL 182
Query: 134 ERHK-TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDT 192
+R+ +NY +K + + + ++ + E +K + I F K
Sbjct: 183 DRYDYKYENYIDSKFRITMNQTEDDYLIYDADDEAIAEWLKNNTTKAKLI-PFSLTKTFN 241
Query: 193 EA---KTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTI 249
E K + EV +++ ++ + G+HN N A+AA SV L + + + ++
Sbjct: 242 EGAFIKNNNMEVIINQDEFKMETESIALEGKHNMKN-AMAATSVAKL-MQIRKATIRESL 299
Query: 250 EILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
+ HR++ V + IQ V +++DSKATN+ AT L D V ++GG K
Sbjct: 300 SNFQGVEHRLEKVLK-IQNVQYINDSKATNVNATFFAL-DSMNSPTVWIVGGVDK 352
>gi|116750887|ref|YP_847574.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Syntrophobacter
fumaroxidans MPOB]
gi|116699951|gb|ABK19139.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Syntrophobacter
fumaroxidans MPOB]
Length = 446
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 139/287 (48%), Gaps = 26/287 (9%)
Query: 25 GKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSE 84
G ++ E ++A + + ++AVTGTNGK+T +G+M+ G FVGGN+G PLS
Sbjct: 89 GIEIVGEFEWAWRQV--DAPVIAVTGTNGKTTTTALIGEMIKASGTRVFVGGNIGTPLSR 146
Query: 85 AAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYAL 144
+ V+EVSS+Q++ F P V V+LN+T DHL+R++ + Y
Sbjct: 147 WLL-------DGDRVDCMVLEVSSFQLDTAF-LFRPEVGVLLNVTEDHLDRYRDFEEYTE 198
Query: 145 TKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHR-FN-----LAWIGAFPGVKIDTEAKTAS 198
+K +F +T + ++ +L++ + G R FN L P E
Sbjct: 199 SKLSMFGRQESTDVAVI-----NLDDPVCGSRPFNGKGRLLTSSRNDPRTHAHVEDGRIV 253
Query: 199 FEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHR 258
VP +L L ++++ G HN N A L+ L +D V EA+ PHR
Sbjct: 254 VNVPWKPEF-RLDLADLRLKGVHNEENVLAAILACLAMD--VVPEAVARAAGTFGGLPHR 310
Query: 259 MQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKV 305
++ V R GV + DDSK TN+ A + + ++LLGG+ K+
Sbjct: 311 VEWV-RAAGGVDYYDDSKGTNVGAVVKAIENFD-RPVLLLLGGRDKL 355
>gi|402823983|ref|ZP_10873378.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Sphingomonas sp.
LH128]
gi|402262523|gb|EJU12491.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Sphingomonas sp.
LH128]
Length = 450
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 118/248 (47%), Gaps = 35/248 (14%)
Query: 44 KILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAV 103
+++ +TGTNGKST + V +L G+ A GGN+G P + P P+ V V
Sbjct: 115 RVVGITGTNGKSTTTSLVCHLLEVAGVPARAGGNIGVP--------VLGPEPLPEGGVYV 166
Query: 104 VEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPF 163
+E+SSYQ++I C V+ +LN+TPDHL+R+ + YA +K LFS + +
Sbjct: 167 LELSSYQIDITRSLDC-DVAALLNITPDHLDRYDGFEAYAASKGRLFSMQGRERQAVFGV 225
Query: 164 GNQHLNEAIKGHRFNLAWIGA---FPG-VKIDTEAKTASFEVPAVGVVSQLQLHNMKVMG 219
G++ ++A I A PG V+ A + ++Q + G
Sbjct: 226 GDKETR--------SIAHIEAARRAPGLVRFADGAD-----------LVEIQKEWPSLQG 266
Query: 220 RHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATN 279
HN NAAVA V L GV + PHRM+ V GVT+++DSKATN
Sbjct: 267 PHNLQNAAVAVAIVEAL--GVKKAQWRKGLRTFSGLPHRMERVAV-ANGVTYINDSKATN 323
Query: 280 LEATCTGL 287
+T +
Sbjct: 324 PASTAPAI 331
>gi|357419814|ref|YP_004932806.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Thermovirga lienii
DSM 17291]
gi|355397280|gb|AER66709.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Thermovirga lienii
DSM 17291]
Length = 457
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 153/299 (51%), Gaps = 44/299 (14%)
Query: 22 LQSGKRVMSELDFAAQVIPR-SIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
L+ G V+ ELDF V P K++ VTGTNGK+T + + +L + G EA GN+GN
Sbjct: 93 LKRGIPVVGELDF---VFPHLKSKVIGVTGTNGKTTTTSLIAHLLTNGGFEAEAVGNIGN 149
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMK 140
L++ AF + VVEVSS+Q+ ++Y +SV+ N+ PDHL+ H + +
Sbjct: 150 ALADYAF---------SDHEWLVVEVSSFQL-YWSQYASFDISVITNIAPDHLDWHGSYE 199
Query: 141 NYALTKCHLFSHMVNTKLGLLPFGN-----QHLNEAIKGHRF--NLAWIGAFP-GVKID- 191
Y +K +F+ + +G+ + + LN +K F N + +P G+ +
Sbjct: 200 EYFASKTKIFNLTSDNGIGICQARDVEEIKKQLNRPLKIIPFVDNKNKVVDWPEGIYFED 259
Query: 192 ------TEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEAL 245
++K F+V N+ ++G HN NAA++A V+ G+D + +
Sbjct: 260 GQCVLRDDSKIRLFDVS-----------NVHLIGTHNLENAAMSA--VVAYYSGLDPQVI 306
Query: 246 NSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
I+ + PHR + V + G+ +V+DSK TN+ +T L ++G K +I+LGG+ K
Sbjct: 307 EEGIDSFKALPHRCEEV-ANKNGIRYVNDSKGTNVSSTVAALNSIEGKK-IIILGGKGK 363
>gi|306843220|ref|ZP_07475831.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Brucella sp. BO2]
gi|306286585|gb|EFM58162.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Brucella sp. BO2]
Length = 467
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 119/244 (48%), Gaps = 14/244 (5%)
Query: 46 LAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVE 105
+A+TGTNGKST + ++ G + +GGN+G + P +F V VE
Sbjct: 117 IAITGTNGKSTTTALIAHIIKATGRDMQLGGNIGTAI------LTLEPPCADRFYV--VE 168
Query: 106 VSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFGN 165
SSYQ+++ PT ++LNLTPDHL+RH +M+NYA K L + +G+
Sbjct: 169 CSSYQIDL-APSLNPTAGILLNLTPDHLDRHGSMENYAAIKERLVAASGTAIIGVDDAYC 227
Query: 166 QHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQL-QLHNM-KVMGRHNY 223
Q + + + G + I + A A G + ++ L + + G HN
Sbjct: 228 QAIADRLHGAGIRVVRISKEKHLDRGYFADGAKLLWAQDGEIDEIASLEGIGSLRGAHNA 287
Query: 224 HNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEAT 283
NA A ++ L G+ +E +++ ++ HRM+ V R + V +V+DSKATN EAT
Sbjct: 288 QNALAAIVAC--LSAGLSLEEIHAGLKSFPGLAHRMEQVGRRGK-VLFVNDSKATNAEAT 344
Query: 284 CTGL 287
L
Sbjct: 345 APAL 348
>gi|229829365|ref|ZP_04455434.1| hypothetical protein GCWU000342_01454 [Shuttleworthia satelles DSM
14600]
gi|229792528|gb|EEP28642.1| hypothetical protein GCWU000342_01454 [Shuttleworthia satelles DSM
14600]
Length = 451
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 153/317 (48%), Gaps = 19/317 (5%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
L GKR+ E++ A + + R + A+TGTNGK+T + VG +L + V GN+G
Sbjct: 85 LKARGKRIWGEIELAYR-LGRG-HLAAITGTNGKTTTTSMVGLILRTCFPDVQVVGNIGT 142
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMK 140
P +E A +K + ++ V EVSS+Q+E F P VS +LN+TPDHL RH TM+
Sbjct: 143 PYTEVA------ADTKDETRI-VAEVSSFQLETIET-FHPLVSAILNITPDHLNRHHTME 194
Query: 141 NYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFE 200
NY K + + + +L + L E K ++ W +K +
Sbjct: 195 NYIACKERITENQTADETVVLNLEDPILREFGKTLPNHVVWFSGKRRLKKGYYYREEDRS 254
Query: 201 VPAVGVVSQ---LQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPH 257
+ + L + ++V+GRHNY N A+AA+++ +GV ++ + + H
Sbjct: 255 IRYCQGQEEEFILSVRELQVVGRHNYEN-AMAAIAI-SRAMGVPMDKIKEGLRAFTAVEH 312
Query: 258 RMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFE-- 315
R++ V +GV + +DSK TN +A G+ + C+I G K G + F+
Sbjct: 313 RIEYVCTK-RGVRYYNDSKGTNPDAAIKGIEAMDSPTCLIGGGYDKKSDFGDWIDAFKGK 371
Query: 316 -KLIEPLNHHRCVITEC 331
KL+ + R I +C
Sbjct: 372 VKLLVLIGETRAQIAKC 388
>gi|422821721|ref|ZP_16869914.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Streptococcus
sanguinis SK353]
gi|324990672|gb|EGC22608.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Streptococcus
sanguinis SK353]
Length = 459
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 139/288 (48%), Gaps = 29/288 (10%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+ +TG+NGK+T T + Q+L G + GN+G P S+ A S+K V+
Sbjct: 123 IIGITGSNGKTTTTTMIAQVLTAGGQNGLLSGNIGFPASQVAQTA----SNKDTL---VM 175
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFG 164
E+SS+Q+ + + F P ++V+ NL P HL+ H +++ YA+ K ++ +M +L F
Sbjct: 176 ELSSFQL-MGIEAFYPQIAVITNLMPTHLDYHGSVEEYAVAKWNIQKNMTADDYLVLNFN 234
Query: 165 NQHLNEAIKGHRFNLAWIGAFPGV-KIDT---EAKTASFEVPAVGVVSQLQLHNMKVMGR 220
E + A + F K+D E +F A+ +Q+ + V G
Sbjct: 235 QDWAKEMASQTQ---ATVVPFSTTEKVDGAYLEGDVLTFRGEAI-----MQVAEIGVPGS 286
Query: 221 HNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNL 280
HN N A+A ++V L G+D + + + HR+Q V + + V + +DSK+TN+
Sbjct: 287 HNVEN-ALATIAVAKLR-GIDNQTIKEVLSAFGGVKHRLQYVGQ-VNEVAFYNDSKSTNI 343
Query: 281 EATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPLNHHRCVI 328
AT L K +++ GG + N F++L+ L + ++
Sbjct: 344 LATQKALSGFDNSKVILIAGGLDR------GNEFDELVPDLKGLKKMV 385
>gi|238784570|ref|ZP_04628577.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Yersinia
bercovieri ATCC 43970]
gi|238714536|gb|EEQ06541.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Yersinia
bercovieri ATCC 43970]
Length = 438
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 128/265 (48%), Gaps = 23/265 (8%)
Query: 43 IKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVA 102
+ ++A+TG+NGKSTV T VG+M G + VGGN+G P AL K + Q+
Sbjct: 105 VPVVAITGSNGKSTVTTLVGEMAKAAGWQVGVGGNIGVP---------ALTLLKQENQLV 155
Query: 103 VVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK-TMKNYALTKCHLFSHMVNTKLGLL 161
V+E+SS+Q+E + + + +LN+T DH +R+ ++ Y K ++ N K+ ++
Sbjct: 156 VLELSSFQLETTSS-LRASAATILNVTEDHTDRYPFGLQQYRAAKLRVYE---NAKVCVV 211
Query: 162 PFGNQHLNEAIKGHRFNLAWIGAFPG-VKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGR 220
+ L ++G G G ++ + V V L MK+ GR
Sbjct: 212 N-ADDALTMPVRGADSRCISFGVDVGDYHLNKQQGEIWLRVRGEKV---LNTREMKLTGR 267
Query: 221 HNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNL 280
HNY NA A +G+ + + + PHR Q+V GV W++DSKATN+
Sbjct: 268 HNYTNALAALALA--DAVGIPRSSSLTALTTFTGLPHRFQLVFEH-NGVRWINDSKATNV 324
Query: 281 EATCTGLMDLKGHKCV-ILLGGQAK 304
+T L L+ + +LLGG K
Sbjct: 325 GSTEAALDGLQVDGTLHLLLGGDGK 349
>gi|398841925|ref|ZP_10599130.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Pseudomonas sp.
GM102]
gi|398107034|gb|EJL97044.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Pseudomonas sp.
GM102]
Length = 448
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 143/295 (48%), Gaps = 40/295 (13%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+A++G+N KSTV T VG+M G VGGNLG P AL ++ V+
Sbjct: 111 IVAISGSNAKSTVTTLVGEMAAAAGKRVAVGGNLGTP---------ALDLLSDDIELYVM 161
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLF----SHMVNTKLGL 160
E+SS+Q+E ++ V+ VLN++ DH++R+ + Y L K +F +VN + L
Sbjct: 162 ELSSFQLETTDQ-LNAEVATVLNISEDHMDRYSGLPAYHLAKHRIFRGARQFVVNRQDAL 220
Query: 161 LPFGNQHLNEAIKGHRFNL--AWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVM 218
+ E F L AF G++ + K +FE + + + +KV
Sbjct: 221 ---SRPLMGEGQPCWTFGLNKPDFKAF-GIREEDGEKYLAFEFQNL-----MPVRELKVR 271
Query: 219 GRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKAT 278
G HN NA A G +G+ +A+ S + HR Q V R++ GV++ +DSKAT
Sbjct: 272 GAHNQSNALAALAL--GHAVGLPFDAMLSALRNFAGLEHRCQWV-RELNGVSYYNDSKAT 328
Query: 279 NLEATCTGL----MDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPLNHH-RCVI 328
N+ A + D+ G K V++ GG K G E F+ L +P+ + R VI
Sbjct: 329 NVGAALAAIEGLGADIDG-KLVLIAGGDGK---GAE---FKDLRDPVAANCRAVI 376
>gi|374385849|ref|ZP_09643351.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Odoribacter laneus
YIT 12061]
gi|373224794|gb|EHP47130.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Odoribacter laneus
YIT 12061]
Length = 450
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 148/297 (49%), Gaps = 25/297 (8%)
Query: 18 LACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGN 77
+ L G V+SE++ A + ++ +TG+NGK+T + +L G++A + GN
Sbjct: 78 IKALQAKGIEVISEIELAGR--HSDAIMICITGSNGKTTTTLLIHHILVQAGMDAGLAGN 135
Query: 78 LGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK 137
+G H +A ++ + VVE+SS+Q++ + F ++V+ N+TPDHL+R+
Sbjct: 136 VG--------HSLAAQVAENAHPLYVVELSSFQLDGMFR-FQADIAVLTNVTPDHLDRYD 186
Query: 138 -TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWI----GAFPGVKIDT 192
+NY +K + ++M L + + + + + + G + + G P ++
Sbjct: 187 YKFENYVNSKFRILNNMGKEGLFIYGYDCEVVRQRVIGQKLLPQAVPFTYGGEPDLQQAG 246
Query: 193 EAKTASFEVPAVGV-----VSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNS 247
A E + V V ++ +++ + GRHN +NA A L+ + GVD A+ +
Sbjct: 247 GTACAYMEGDTIVVRLDEKVFRMDKNDVSIKGRHNVYNAMAAILAC--MRAGVDPGAIAA 304
Query: 248 TIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
++ HR++ V + GVT+++DSKATN+++ L D H V + GG K
Sbjct: 305 GLKSFPQVEHRLETVAV-VAGVTYINDSKATNVDSAWYAL-DSMTHPVVWIAGGTDK 359
>gi|291544563|emb|CBL17672.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Ruminococcus
champanellensis 18P13]
Length = 462
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 136/312 (43%), Gaps = 28/312 (8%)
Query: 17 GLACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGG 76
L + G + SE++ + P +I VTG++GK+T T + +ML G + GG
Sbjct: 92 ALTAARKQGVIITSEMETFFDLCP--CRIYGVTGSDGKTTTTTLISEMLAKTGRRVYKGG 149
Query: 77 NLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERH 136
N+G L + L + + AVVE+SS+Q+ + P V+V+ N++P+HL+ H
Sbjct: 150 NIGKAL-------LPLIETIREEDAAVVELSSFQLISMRR--SPDVAVITNISPNHLDVH 200
Query: 137 KTMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWI----GAFPGVKIDT 192
TM+ Y K +L +H +L N + R L W G +D
Sbjct: 201 GTMEEYIGCKVNLIAHQNAYSKTVLNLDNAQTAALAEQVRGRLLWFTRQQKPERGTFLDA 260
Query: 193 EAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEIL 252
E E + ++ ++++ G HN N A +V G V E + +
Sbjct: 261 EGWLCYAEAGKTQRI--VRAEDIRIPGLHNVENYLAAIAAVWG---EVPAETIVEVAKTF 315
Query: 253 RTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESN 312
HR++ V R++ GV W +DS AT+ GL + +++ GG K +
Sbjct: 316 GGVEHRIEFV-RELDGVKWYNDSIATSPTRVLAGLRSFN-QRLIVIAGGYDKKIP----- 368
Query: 313 GFEKLIEPLNHH 324
FE + E +N
Sbjct: 369 -FEPMAETVNQR 379
>gi|296327766|ref|ZP_06870305.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Fusobacterium
nucleatum subsp. nucleatum ATCC 23726]
gi|296155113|gb|EFG95891.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Fusobacterium
nucleatum subsp. nucleatum ATCC 23726]
Length = 428
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 143/308 (46%), Gaps = 33/308 (10%)
Query: 9 LEFQLKATGLAC------LLQSGKRVMSELDFAAQ-VIPRSIK--ILAVTGTNGKSTVVT 59
LEF +K+ G+ + + G +++ E++ A +I + +K I+A+TGTNGKST
Sbjct: 44 LEFFIKSPGIPYNDFVKEVQKRGIKILDEIEIAYNYMIEKGLKTKIIAITGTNGKSTTTA 103
Query: 60 FVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQME-IPNKYF 118
+ MLNH G +A GN+G LSE + +E+SS+Q+E I N F
Sbjct: 104 KISDMLNHAGYKATYAGNIGRSLSEVLL-------KEKDLDFISLELSSFQLENIEN--F 154
Query: 119 CPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFN 178
P +S+++N+ PDH+ER+K+ Y K ++ + + ++ + + K +
Sbjct: 155 KPCISMIINIGPDHIERYKSFDEYYNIKFNITKNQTEDLYFIENIDDEEIEKRAKQIKAK 214
Query: 179 LAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNA--AVAALSVLGL 236
+ F I E + + V +L L G HN N VA +L L
Sbjct: 215 RISVSKFKKADIFVENDKIYHDKDDIIDVDKLSLK-----GIHNLENTLFMVATAEILKL 269
Query: 237 DIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCV 296
D E L + I HR ++ + + +++DSKATN+++T + K +
Sbjct: 270 ----DREKLKGFLMIATPLEHRTELFF-NYGKLKFINDSKATNVDSTKFAIQANKN--SI 322
Query: 297 ILLGGQAK 304
++ GG K
Sbjct: 323 LICGGYDK 330
>gi|422339952|ref|ZP_16420908.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Fusobacterium
nucleatum subsp. polymorphum F0401]
gi|355370391|gb|EHG17774.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Fusobacterium
nucleatum subsp. polymorphum F0401]
Length = 432
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 147/325 (45%), Gaps = 67/325 (20%)
Query: 9 LEFQLKATGLAC------LLQSGKRVMSELDFAAQ-VIPRSIK--ILAVTGTNGKSTVVT 59
LEF +K+ G+ + + G +++ E++ A +I + +K I+A+TGTNGKST
Sbjct: 48 LEFFIKSPGIPYNDFVKEVQKRGIKILDEIEIAYNYMIEKGLKTKIIAITGTNGKSTTTA 107
Query: 60 FVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQME-IPNKYF 118
+ MLNH G +A GN+G LSE + +E+SS+Q+E + N F
Sbjct: 108 KISDMLNHAGYKAAYAGNIGRSLSEVLL-------KEKDLDFISLELSSFQLENVEN--F 158
Query: 119 CPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFN 178
P +S+++N+ PDH+ER+K+ Y TK ++ K +
Sbjct: 159 KPYISMIINMGPDHIERYKSFDEYYDTKFNI----------------------TKNQTED 196
Query: 179 LAWIGAFPGVKIDTEAK--------TASFEVPAVGVVSQ---------LQLHNMKVMGRH 221
L +I V+I+ AK + F+ + V + + + + + G H
Sbjct: 197 LYFIENIDDVEIEKRAKQIKAKRISVSKFKKADIFVKNDKICHGENTIIDVDKLSLKGIH 256
Query: 222 NYHNA--AVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATN 279
N N VA +L +D E L + I HR ++ + + +++DSKATN
Sbjct: 257 NLENTLFMVATAEIL----KIDKEKLKEFLMIATPLEHRTELFF-NYGKLKFINDSKATN 311
Query: 280 LEATCTGLMDLKGHKCVILLGGQAK 304
+++T + K +++ GG K
Sbjct: 312 VDSTKFAIQANKN--SILICGGYDK 334
>gi|256425925|ref|YP_003126578.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Chitinophaga
pinensis DSM 2588]
gi|256040833|gb|ACU64377.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Chitinophaga
pinensis DSM 2588]
Length = 446
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 148/300 (49%), Gaps = 30/300 (10%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V+SE++FA + S K++A+TG+NGKST + G+ A + GN+G LS A
Sbjct: 90 VISEIEFAYRYSKDS-KVIAITGSNGKSTTTALTFNIFETAGLHAAMVGNIG--LSYAR- 145
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK-TMKNYALTK 146
P+ +VEVSS+Q++ + F P V+++LN+TPDHL+R+ M NY +K
Sbjct: 146 QIATAPAD-----YYIVEVSSFQLD-DIRDFKPNVAILLNITPDHLDRYDYKMANYVASK 199
Query: 147 CHLFSHMVNTKLGLLPFGNQHLNEAIKGHR-------FNLAWIGAFPGVKIDTEAKTASF 199
+ + + + + +K H F + G + +
Sbjct: 200 FRIAMNQGPEDYFVYCIDDPEITNYLKEHTIYSTTIPFTIMEPLKQGGFMANEQVNIQVN 259
Query: 200 EVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRM 259
+ P + + ++++ + G+HN +N+ A ++ +DI E + ++ ++ HRM
Sbjct: 260 DEPMI-----VSMYDLALKGKHNLYNSMAAGIAGRTMDIR--KEKIRESLTSFKSLEHRM 312
Query: 260 QIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLIE 319
+ V ++GV +++DSKATN+ + L ++ H V+++GG V G + + L++
Sbjct: 313 EYVAT-VRGVDFINDSKATNVNSLWFALESME-HPVVLVMGG---VDKGNDYSAIRDLVK 367
>gi|167768724|ref|ZP_02440777.1| hypothetical protein ANACOL_00041 [Anaerotruncus colihominis DSM
17241]
gi|167669122|gb|EDS13252.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Anaerotruncus
colihominis DSM 17241]
Length = 489
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 133/297 (44%), Gaps = 34/297 (11%)
Query: 18 LACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGN 77
+ L + G V SE++ + P + + +TG++GK+T T + ++L G A +GGN
Sbjct: 120 IDALRRDGVVVTSEMELFFDLCP--CRTIGITGSDGKTTTTTLIAEILKEGGRRAHIGGN 177
Query: 78 LGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK 137
+G PL + + AV E+SS+Q+ + P ++VV N++P+HL+ H
Sbjct: 178 IGRPL-------MPILRDIRDNDFAVAELSSFQLISMRE--SPDIAVVTNISPNHLDVHG 228
Query: 138 TMKNYALTKCHLFSHMVNTKLGLLPFGNQ---HLNEAIKGHRFNLA-----WIGAFPGVK 189
M+ Y K ++ H +L N+ ++G F + GAF G
Sbjct: 229 NMQEYIDAKRNIVLHQNAFSRTVLGVDNELAASFAADVRGRLFEFSVRRPVRTGAFLG-- 286
Query: 190 IDTEAKTASFEVPAVGVVSQLQLHN--MKVMGRHNYHNAAVAALSVLGLDIGVDVEALNS 247
F +V +H +++ G HN N A +V G VDVEA+ +
Sbjct: 287 ------GDGFLYASVNGERSKIIHKNELRLPGMHNIQNYLAAVCAVWG---AVDVEAIRN 337
Query: 248 TIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
HR++ V R+ GV W +DS AT T GL D G K +++ GG K
Sbjct: 338 VAMEFGGVEHRIEFV-REKDGVRWYNDSIATTPTRTIAGL-DSFGQKLIVIAGGYDK 392
>gi|294784925|ref|ZP_06750213.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Fusobacterium
sp. 3_1_27]
gi|294486639|gb|EFG34001.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Fusobacterium
sp. 3_1_27]
Length = 432
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 140/308 (45%), Gaps = 33/308 (10%)
Query: 9 LEFQLKATGLAC------LLQSGKRVMSELDFAAQVIPRS---IKILAVTGTNGKSTVVT 59
+EF +K+ G+ + + G +++ E++ A + KI+A+TGTNGKST
Sbjct: 48 IEFFIKSPGIPYNNFVKEVQKRGIKILDEIEIAYNYMIEKGMKTKIIAITGTNGKSTTTA 107
Query: 60 FVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQME-IPNKYF 118
+ MLN+ G +A GN+G LSE + +E+SS+Q+E I N F
Sbjct: 108 KISDMLNYAGYKAAYAGNIGRSLSEVLL-------KEKDLDFISLELSSFQLENIEN--F 158
Query: 119 CPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFN 178
P +S+++N+ PDH+ER+ + Y TK ++ + + + + + K +
Sbjct: 159 KPYISMIINMGPDHIERYNSFDEYYDTKFNITKNQTEDLYFIENIDDVEIEKRAKQIKAK 218
Query: 179 LAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNA--AVAALSVLGL 236
+ F I + + ++ V +L L G HN N VA +L
Sbjct: 219 RISVSKFKKADIFVKNDKICYGENSIIDVDKLSLK-----GIHNLENTLFMVATAEIL-- 271
Query: 237 DIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCV 296
+D E L + I HR ++ + V +++DSKATN+++T + K +
Sbjct: 272 --KIDREKLKEFLMIATPLEHRTELFF-NYGKVKFINDSKATNVDSTKFAIQANKN--SI 326
Query: 297 ILLGGQAK 304
++ GG K
Sbjct: 327 LICGGYDK 334
>gi|265984470|ref|ZP_06097205.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Brucella sp. 83/13]
gi|306839243|ref|ZP_07472060.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Brucella sp. NF
2653]
gi|264663062|gb|EEZ33323.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Brucella sp. 83/13]
gi|306405790|gb|EFM62052.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Brucella sp. NF
2653]
Length = 467
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 119/244 (48%), Gaps = 14/244 (5%)
Query: 46 LAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVE 105
+A+TGTNGKST + ++ G + +GGN+G + P +F V VE
Sbjct: 117 IAITGTNGKSTTTALIAHIIKATGRDMQLGGNIGTAI------LTLEPPCADRFYV--VE 168
Query: 106 VSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFGN 165
SSYQ+++ PT ++LNLTPDHL+RH +M+NYA K L + +G+
Sbjct: 169 CSSYQIDL-APSLNPTAGILLNLTPDHLDRHGSMENYAAIKERLVAASGTAIIGVDDAYC 227
Query: 166 QHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQL-QLHNM-KVMGRHNY 223
Q + + + G + I + A A G + ++ L + + G HN
Sbjct: 228 QAIADRLHGAGIRVVRISKEKHLDRGYFADGAKLLWSQDGEIDEIASLEGIGSLRGAHNA 287
Query: 224 HNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEAT 283
NA A ++ L G+ +E +++ ++ HRM+ V R + V +V+DSKATN EAT
Sbjct: 288 QNALAAIVAC--LSAGLSLEEIHAGLKSFPGLAHRMEQVGRRGK-VLFVNDSKATNAEAT 344
Query: 284 CTGL 287
L
Sbjct: 345 APAL 348
>gi|108763559|ref|YP_633745.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Myxococcus xanthus
DK 1622]
gi|118595667|sp|Q1D0S8.1|MURD_MYXXD RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|108467439|gb|ABF92624.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Myxococcus xanthus
DK 1622]
Length = 455
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 91/295 (30%), Positives = 135/295 (45%), Gaps = 36/295 (12%)
Query: 24 SGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLS 83
+G V E++ A +++ + + +TGTNGKST G + FVGGNLG P S
Sbjct: 93 AGVAVWGEVELAGRML-SGVPLFGITGTNGKSTTTALTGTLFASGDKRTFVGGNLGRPFS 151
Query: 84 EAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYA 143
EAA S + VVE+SSYQ+E + P + +LNLTPDH++R+ + Y
Sbjct: 152 EAAM-------SPGDWDALVVELSSYQLE-GIRTLRPRGAAILNLTPDHIDRYPSHAAYG 203
Query: 144 LTKCHLFSHMVNTKLGLLPFGNQH------LNEAIKGHRFNLAWIG-------AFPGVKI 190
K +F N + G N L A K + + G A G+ +
Sbjct: 204 EAKARIFQ---NQQAGDFVVVNADDADVLGLARAAKAPVYGFSLTGKPVADAPALAGLAV 260
Query: 191 DTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSV-LGLDIGVDVEALNSTI 249
+ F + +G L N + G HN NA AAL LG GV A+ + +
Sbjct: 261 ---VEPGGFRLAFLG--EHYTLTNRALRGAHNAQNAMAAALLARLG---GVASGAVQAGL 312
Query: 250 EILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
+ PHR++ V R + GV WV+DSKATN+++ L ++ GG+ K
Sbjct: 313 DGYPGLPHRLESV-RVLDGVEWVNDSKATNVDSVLVALRAFS-QGVWLIAGGKGK 365
>gi|422871415|ref|ZP_16917908.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Streptococcus
sanguinis SK1087]
gi|328945583|gb|EGG39734.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Streptococcus
sanguinis SK1087]
Length = 459
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 134/281 (47%), Gaps = 29/281 (10%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+ +TG+NGK+T T + Q+L G + GN+G P S+ A SSK V+
Sbjct: 123 IIGITGSNGKTTTTTMIAQVLTAGGQNGLLSGNIGFPASQVAQTA----SSKDTL---VM 175
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFG 164
E+SS+Q+ I + F P ++V+ NL P HL+ H +++ YA K ++ +M +L F
Sbjct: 176 ELSSFQL-IGIEDFHPQIAVITNLMPTHLDYHGSVEEYAAAKWNIQKNMTADDYLVLNFN 234
Query: 165 NQHLNEAIKGHRFNLAWIGAFPGV-KIDT---EAKTASFEVPAVGVVSQLQLHNMKVMGR 220
E + A + F K+D E +F A+ +Q + V G
Sbjct: 235 QDWAKEMASQTQ---ATVMPFSTTEKVDGAYLEGDVLTFRGEAI-----MQAAEIGVPGS 286
Query: 221 HNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNL 280
HN N A+A ++V L G+D + + + HR+Q V + + V + +DSK+TN+
Sbjct: 287 HNVEN-ALATIAVAKLR-GIDNQTIKEVLSAFGGVKHRLQYVGQ-VNEVAFYNDSKSTNI 343
Query: 281 EATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPL 321
AT L K +++ GG + N F++L+ L
Sbjct: 344 LATQKALSGFDNSKVILIAGGLDR------GNEFDELVPDL 378
>gi|374288905|ref|YP_005035990.1| putative UDP-N-acetylmuramoylalanine--D-glutamate ligase
[Bacteriovorax marinus SJ]
gi|301167446|emb|CBW27028.1| putative UDP-N-acetylmuramoylalanine--D-glutamate ligase
[Bacteriovorax marinus SJ]
Length = 448
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 141/295 (47%), Gaps = 41/295 (13%)
Query: 22 LQSGKRVMSELDFAAQVIPRSI---KILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNL 78
L G V+SE++FA + + S+ KI++VTGTNGK+T VT + + G +F+GGN+
Sbjct: 89 LTKGIEVISEIEFAYRALKNSLSKTKIISVTGTNGKTTTVTIIDLLARGAGCSSFLGGNI 148
Query: 79 GNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKT 138
G PL+ A L S + + + +E+SS+Q+E + F V+ +LN++ +H ER++
Sbjct: 149 GTPLATYALEV--LSSKRSEASLITLELSSFQLESMDT-FKSDVAAILNISANHGERYER 205
Query: 139 MKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGV--KIDTEAKT 196
+ +YA K + ++ ++ + ++G G + +
Sbjct: 206 VSDYARAKFSIADNLDDS---------------------DNIFVGDLGGFEKEFNPSCNL 244
Query: 197 ASFEVP-AVGVVSQLQLHNMKVMGRHNYHNAAVAA--LSVLGLDIGVDVEALNSTIEILR 253
EVP + + S + +++G HN N A L +G+D +E L +
Sbjct: 245 IKLEVPRSADIFSGNVRESFQLIGEHNLSNLNFATKLLETVGVDWKNGLEQLKE----FQ 300
Query: 254 TPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGL----MDLKGHKCVILLGGQAK 304
+R+Q +G+ +D+K+TN EA+ T L K ++LGG+ +
Sbjct: 301 GVSYRLQ-KRPSREGLYIFNDAKSTNWEASLTALKACEFSYKNLPISLILGGKLR 354
>gi|289549042|ref|YP_003474030.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Thermocrinis albus
DSM 14484]
gi|289182659|gb|ADC89903.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Thermocrinis albus
DSM 14484]
Length = 422
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 132/287 (45%), Gaps = 31/287 (10%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
++ G V+ EL+ A + + +A+TGT+GKST +L GGN+G P
Sbjct: 65 VRKGIEVIGELELAWRFFEGTA--IAITGTDGKSTTTRLSYLILRSYFSHVEEGGNIGVP 122
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
S L PK +AV+EVSS+Q + K F P V LN + DHL+ H +++
Sbjct: 123 FS-------YLVMKNPK-ALAVLEVSSFQGKT-LKTFRPHVGAFLNFSEDHLDWHPDLRD 173
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKID----TEAKTA 197
Y +K ++FS LL + + R G VK D +E K
Sbjct: 174 YLWSKYNIFSRQTPEDWILLNGTQKVTRDTPSPARKVFFGDGCEAHVKEDGAYWSEEKLF 233
Query: 198 SFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPH 257
S E ++K++G+HN +NA VA V+G +GV + + + R PH
Sbjct: 234 SVE-------------DIKLIGKHNLYNALVAC--VIGRIMGVPTDRMKEVLRDFRGLPH 278
Query: 258 RMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
R+++V D GV +DSK+T A L + + +++ GG+ K
Sbjct: 279 RLELVG-DFGGVLVYNDSKSTTPNALQAALGSMPDGRVILIAGGKDK 324
>gi|146295957|ref|YP_001179728.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
[Caldicellulosiruptor saccharolyticus DSM 8903]
gi|166224756|sp|A4XI02.1|MURD_CALS8 RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|145409533|gb|ABP66537.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase
[Caldicellulosiruptor saccharolyticus DSM 8903]
Length = 453
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 97/309 (31%), Positives = 141/309 (45%), Gaps = 40/309 (12%)
Query: 23 QSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPL 82
+ G V+ E++ A + RS I+A+TGTNGK+T T VG++L + V GN+G P
Sbjct: 91 KRGIEVIGEIELAYRFC-RSKNIVAITGTNGKTTTTTLVGEILKKVFDNVIVCGNIGFPF 149
Query: 83 SEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNY 142
I S + V+E+SS+Q+E KYF P V +LN+TPDHL RH M NY
Sbjct: 150 -------IDYVESSTDDTIFVIEISSFQLETI-KYFKPMVGCILNITPDHLNRHMNMDNY 201
Query: 143 ALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVP 202
K +F ++ +L N + IG G I T +K S
Sbjct: 202 IRAKMRIFENIDQEGYSVLNMDNSITRD----------LIGCAKGTVI-TFSKNESDTQN 250
Query: 203 AVGVVSQLQLHNM-----KVM--------GRHNYHNAAVAALSVLGLDIGVDVEALNSTI 249
+V V N KVM G HN N A VL +I + + T+
Sbjct: 251 SVFVDGDFIYRNFLGKVEKVMRKDDIFMPGEHNLENTLAAIGCVLPFEIQPSI--IEKTL 308
Query: 250 EILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQ 309
+ + HR++ V R+I GV + +DSK TN +A+ L + +++ GG K G+
Sbjct: 309 KEFKGVEHRIEFV-REINGVRFYNDSKGTNTDASSKALNSFE-VPIILIAGGYDK---GE 363
Query: 310 ESNGFEKLI 318
F KLI
Sbjct: 364 SFEKFAKLI 372
>gi|451344324|ref|ZP_21913384.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Eggerthia
catenaformis OT 569 = DSM 20559]
gi|449337038|gb|EMD16206.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Eggerthia
catenaformis OT 569 = DSM 20559]
Length = 447
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 149/304 (49%), Gaps = 18/304 (5%)
Query: 21 LLQSGKRVMSELDFAAQV-IPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLG 79
L Q G V +E++ A Q+ +P++ +AVTGTNGK+T V+ + ++L + GN G
Sbjct: 88 LKQRGIPVYTEIELAYQMALPQNY--IAVTGTNGKTTTVSLIYEVLKRHHSAVHICGNYG 145
Query: 80 NPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTM 139
P + +S VVE+S++Q+ I F P VS VLNLTPDHL+ ++
Sbjct: 146 IPYCDVVLDYKLYENSGHD---VVVEMSNFQL-IDIDLFHPHVSSVLNLTPDHLDYMDSL 201
Query: 140 KNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNL-AWIGAFPGV-KIDTEAKTA 197
Y +K ++ + + L + L E +K R+ + + F + D E
Sbjct: 202 DEYYASKMRIYENTDLQDIYALNLDDFTLQEYLK--RYPVPCSVETFSVLHHADCELIND 259
Query: 198 SFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPH 257
V+++ ++K++G HN N V+ +++ G+ ++ + I + H
Sbjct: 260 IIYYKGEPVIAR---SDIKIVGLHNVSNIMVSIIALRHA--GLSLQDIKEGISLFHGVEH 314
Query: 258 RMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKL 317
R++ V R+++GV + +DSK TN +A + H ++L+GG K L+ ++ +
Sbjct: 315 RLEFV-REVKGVQYYNDSKGTNTDAAVIAIKAFD-HSVILLMGGHEKGLDIRDVAQYNDR 372
Query: 318 IEPL 321
I+ L
Sbjct: 373 IKIL 376
>gi|281417761|ref|ZP_06248781.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Clostridium
thermocellum JW20]
gi|281409163|gb|EFB39421.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Clostridium
thermocellum JW20]
Length = 466
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 137/299 (45%), Gaps = 49/299 (16%)
Query: 23 QSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPL 82
+ G V SE++ ++ P +I AVTG++GK+T T + ML G + ++GGN+G PL
Sbjct: 99 EEGTEVTSEMEVFFELCP--AEIFAVTGSDGKTTTTTLIYNMLKEQGYKCWLGGNIGIPL 156
Query: 83 SEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNY 142
+ K +V V+E+SS+Q+ K P V+VV N++P+HL+ HK+M+ Y
Sbjct: 157 ------LSKIEEIKDTDKV-VLELSSFQLHTMTK--SPNVAVVTNVSPNHLDVHKSMEEY 207
Query: 143 ALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWI--------GA--------FP 186
K ++F + +L F N E + ++ + GA F
Sbjct: 208 VFAKKNIFRYQSAEDRLVLNFDNDITREFAGEAKGDVVYFSRKTVLEKGAMLKDDMLVFR 267
Query: 187 GVKIDTE-AKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEAL 245
+ +TE AK + +P V HN N A +V+ VD + +
Sbjct: 268 DGETETEIAKASDIVIPGV----------------HNVENFLAATAAVIDC---VDRDVI 308
Query: 246 NSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
HR+++V R+I GV + +DS A++ T GL K K +++ GG K
Sbjct: 309 RKVATTFTGVEHRIELV-REINGVKFYNDSIASSPTRTIAGLNSFK-DKVILIAGGYDK 365
>gi|121535920|ref|ZP_01667716.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Thermosinus
carboxydivorans Nor1]
gi|121305491|gb|EAX46437.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Thermosinus
carboxydivorans Nor1]
Length = 449
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 140/287 (48%), Gaps = 27/287 (9%)
Query: 25 GKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSE 84
G VMSE++ A ++ P I+A+TGTNGK+T T VG+ML G E VGGN+G LS+
Sbjct: 90 GIPVMSEIEVAYRLCP--APIIAITGTNGKTTTTTLVGEMLKAAGREVVVGGNIGLALSQ 147
Query: 85 AAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYAL 144
+ + + V E+SS+Q+E F P ++ VLNLTPDHL+RH+++ NY
Sbjct: 148 EV-------AGISEHGIVVAEISSFQLEGVVD-FRPRIAAVLNLTPDHLDRHRSLDNYKA 199
Query: 145 TKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGA----FPGVKIDTEAKTASFE 200
K +F + +L + + + + + + G +++ E +E
Sbjct: 200 MKERIFRNQRPDDYLVLNYDDPLVRDMAERAPSQAVFFSRKARLSTGARLEDETIVMCWE 259
Query: 201 VPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRT---PPH 257
+ + MK+ G HN NA A+ + + +LRT H
Sbjct: 260 GKTEAICP---VKEMKLFGAHNIENALAASCVAF-----LAGADAGAIGAVLRTFMGVEH 311
Query: 258 RMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
R++ V +I+GV + +DSKATN E+ L GH +++ GG+ K
Sbjct: 312 RIEPVA-EIRGVRYYNDSKATNPESAIKALEAFDGH-IILIAGGRDK 356
>gi|399526405|ref|ZP_10766184.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Actinomyces sp.
ICM39]
gi|398363023|gb|EJN46673.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Actinomyces sp.
ICM39]
Length = 486
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 137/305 (44%), Gaps = 43/305 (14%)
Query: 46 LAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVE 105
L VTGTNGK+T V +GQ+L G++ GN+G P++ A +V VE
Sbjct: 120 LTVTGTNGKTTTVGMLGQILRSAGVKVEEVGNIGTPITRAI---------DSDAEVFAVE 170
Query: 106 VSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFGN 165
+SS+Q+ + P S+ LN+ DHL+ H +++ YA K ++ + + K + P +
Sbjct: 171 LSSFQLHTAHT-VSPLASICLNVDADHLDWHGSVEAYAADKARVYENTI--KACIYPASD 227
Query: 166 QHLN------EAIKGHRF--------NLAWIGAFPGVKIDTE-AKTASFEVPAVGVVSQL 210
+ + + ++G R +++ G G+ +D + + + A+ VS L
Sbjct: 228 RRVEAMVENADVVEGARAIGLTLGAPSVSQFGIVEGLLVDRAFVENRARQAAALAHVSDL 287
Query: 211 QLHNMKVMGRHNYHNA-----AVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRD 265
G + H + A + L GV+ EA+ + R HR I+ R
Sbjct: 288 S-------GAYGAHPSAAVLCDALAAAALARAYGVEPEAVEEGLRSFRPAGHRRAIIARA 340
Query: 266 IQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPLNHHR 325
+TWVDDSKATN A L L + ++GG AK GQ+ +EP+
Sbjct: 341 AD-LTWVDDSKATNAHAARASLAGLPPRSAIWIVGGDAK---GQDFTELITQVEPILRGV 396
Query: 326 CVITE 330
VI E
Sbjct: 397 VVIGE 401
>gi|77408374|ref|ZP_00785114.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
agalactiae COH1]
gi|417004691|ref|ZP_11943330.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
agalactiae FSL S3-026]
gi|421147581|ref|ZP_15607266.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
agalactiae GB00112]
gi|77172977|gb|EAO76106.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
agalactiae COH1]
gi|341577673|gb|EGS28080.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
agalactiae FSL S3-026]
gi|401685701|gb|EJS81696.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
agalactiae GB00112]
Length = 451
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 155/310 (50%), Gaps = 33/310 (10%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V++E++ A V +++ +TG+NGK+T T + ++LN G + GN+G P SE
Sbjct: 99 VLTEVELAYLV--SESQLIGITGSNGKTTTTTMIAEVLNAGGQRGLLAGNIGFPASEVV- 155
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
+ + V+E+SS+Q+ + K F P ++V+ NL P HL+ H + ++Y K
Sbjct: 156 ------QAADDKDILVMELSSFQL-MGVKEFRPHIAVITNLMPTHLDYHGSFEDYVAAKW 208
Query: 148 HLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGV-KID---TEAKTASFEVPA 203
++ + M ++ +L F NQ +++ + + A I F K+D + K ++
Sbjct: 209 NIQNQMSSSDFLVLNF-NQGISKELA--KTTKATIVPFSTTEKVDGAYVQDKQLFYKGEN 265
Query: 204 VGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVH 263
+ + + ++ V G HN N A+A ++V L G+ + + T+ HR+Q +
Sbjct: 266 I-----MSVDDIGVPGSHNVEN-ALATIAVAKL-AGISNQVIRETLSNFGGVKHRLQSLG 318
Query: 264 RDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPLN- 322
+ + G+++ +DSK+TN+ AT L K +++ GG + N F++LI +
Sbjct: 319 K-VHGISFYNDSKSTNILATQKALSGFDNTKVILIAGGLDR------GNEFDELIPDITG 371
Query: 323 -HHRCVITEC 331
H V+ E
Sbjct: 372 LKHMVVLGES 381
>gi|306844332|ref|ZP_07476924.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Brucella inopinata
BO1]
gi|306275404|gb|EFM57145.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Brucella inopinata
BO1]
Length = 467
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 119/244 (48%), Gaps = 14/244 (5%)
Query: 46 LAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVE 105
+A+TGTNGKST + ++ G + +GGN+G + P +F V VE
Sbjct: 117 IAITGTNGKSTTTALIAHIIKATGRDMQLGGNIGTAI------LTLEPPCADRFYV--VE 168
Query: 106 VSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFGN 165
SSYQ+++ PT ++LNLTPDHL+RH +M+NYA K L + +G+
Sbjct: 169 CSSYQIDL-APSLNPTAGILLNLTPDHLDRHGSMENYAAIKERLVAASGTAIIGVDDAYC 227
Query: 166 QHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQL-QLHNM-KVMGRHNY 223
Q + + + G + I + A A G + ++ L + + G HN
Sbjct: 228 QAIADRLHGAGIRVMRISKEKHLDRGYFADGAKLLWSQDGEIDEIASLEGIGSLRGAHNA 287
Query: 224 HNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEAT 283
NA A ++ L G+ +E +++ ++ HRM+ V R + V +V+DSKATN EAT
Sbjct: 288 QNALAAIVAC--LSAGLSLEEIHAGLKSFPGLAHRMEQVGRRGK-VLFVNDSKATNAEAT 344
Query: 284 CTGL 287
L
Sbjct: 345 APAL 348
>gi|148244846|ref|YP_001219540.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Candidatus
Vesicomyosocius okutanii HA]
gi|146326673|dbj|BAF61816.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Candidatus
Vesicomyosocius okutanii HA]
Length = 432
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 135/270 (50%), Gaps = 37/270 (13%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
++ +TG+NGKSTV + QM+ G+ +GGN+G P A C+ K + V+
Sbjct: 103 VIGITGSNGKSTVTKLLTQMIADSGMLVAIGGNIGIP----ALDCL-----NEKIEYYVL 153
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFG 164
E+SSYQ++ + + VVLN+TPDHL+R+ + + Y +K L+ + +
Sbjct: 154 ELSSYQLDY-SYHLNLITGVVLNITPDHLDRYSSFEYYIHSKLSLYQY--------CQYS 204
Query: 165 NQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAV--------GVVSQLQLHNMK 216
+L+E + + N+ + G I+ + F G + + + ++
Sbjct: 205 VVNLDEPLIPKQTNVKYFG------INIPKRANDFGTVTCHNICYLLKGNNTLMSVDEVQ 258
Query: 217 VMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSK 276
++G HN N +AAL+ LG I + + ++ +I+ + HR++ V + Q + + +DSK
Sbjct: 259 LIGEHNTKN-ILAALA-LGDQIKLPISSMIQSIKNFKALEHRLEWVIKK-QNIDYYNDSK 315
Query: 277 ATNLEATCTGLMDL--KGHKCVILLGGQAK 304
ATN +T + L K V++LGG AK
Sbjct: 316 ATNAISTIIAIQTLMYKHQNIVLILGGIAK 345
>gi|303250495|ref|ZP_07336692.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
[Actinobacillus pleuropneumoniae serovar 6 str. Femo]
gi|307251537|ref|ZP_07533444.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|307256037|ref|ZP_07537825.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|302650483|gb|EFL80642.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
[Actinobacillus pleuropneumoniae serovar 6 str. Femo]
gi|306861001|gb|EFM93007.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|306865459|gb|EFM97354.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
Length = 436
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 137/294 (46%), Gaps = 41/294 (13%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+A+TG NGKSTV T V +M GI+ +GGN+G P+ L ++++ V+
Sbjct: 108 IIAITGANGKSTVTTLVTEMAKQAGIKVGMGGNIGVPV---------LSLLNDEYELFVL 158
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERH-KTMKNYALTKCHLFSH----MVNTKLG 159
E+SS+Q+E + + +LN++ DH++R+ +++ Y L K ++ + +VN +
Sbjct: 159 ELSSFQLETTSS-LNAVAATILNISEDHMDRYNNSLEEYRLAKLRIYDNAENVIVNGEDR 217
Query: 160 L-LPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVM 218
L P Q + + I+ +N + T + G + + M +
Sbjct: 218 LTYPLETQAVKKLIRFAEYNAEY--------------TMRNGILYSGDDAIIPTKEMLIS 263
Query: 219 GRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKAT 278
GRHN NA A G+ E + +++ HR Q V + GV WV+DSKAT
Sbjct: 264 GRHNEMNALAAMALA--EAAGIPREGIVKALQVYGGLDHRFQAVKTN-DGVRWVNDSKAT 320
Query: 279 NLEATCTGLMDLK-GHKCVILLGGQAKVLNGQESNGFEKLIEPLNHHRCVITEC 331
N+ +T L L+ +LLGG K + E ++PL + ++ C
Sbjct: 321 NVGSTVAALNGLQVAGTLYLLLGGDGKAADFSE-------LKPLINKPNIVCYC 367
>gi|308185657|ref|YP_003929788.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Pantoea vagans
C9-1]
gi|308056167|gb|ADO08339.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Pantoea vagans
C9-1]
Length = 438
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 84/265 (31%), Positives = 131/265 (49%), Gaps = 27/265 (10%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+A+TG+NGKSTV T VG+M G + VGGN+G P A + P+ Q+ V+
Sbjct: 107 IVAITGSNGKSTVTTLVGEMAKAAGWQVGVGGNIGLP----ALSLLQSPA-----QLYVL 157
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK-TMKNYALTKCHLFSHMVNTKLGLLPF 163
E+SS+Q+E + + VLN+T DH++R+ M+ Y K ++ N ++ ++
Sbjct: 158 ELSSFQLETTHS-LKAAAATVLNVTEDHMDRYPLGMQQYRAAKLRVYE---NAQICIVN- 212
Query: 164 GNQHLNEAIKGHRFNLAWIGA-FPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHN 222
+ L ++G G F ++ + + V V L MK+ G+HN
Sbjct: 213 ADDALTMPVRGADKRCVSFGVDFGDYHLNKQQGSIWLRVKGEKV---LNTAEMKMAGQHN 269
Query: 223 YHN--AAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNL 280
Y N AA+A +GL + AL HR Q+VH QGV W++DSKATN+
Sbjct: 270 YTNALAALALADAVGLPRASSLAALTQ----FNGLAHRFQLVHEH-QGVRWINDSKATNV 324
Query: 281 EATCTGLMDLKGHKCV-ILLGGQAK 304
+T L L+ + +L+GG K
Sbjct: 325 GSTEAALNGLQVQGTLWLLMGGDGK 349
>gi|256369849|ref|YP_003107360.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Brucella
microti CCM 4915]
gi|256000012|gb|ACU48411.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Brucella
microti CCM 4915]
Length = 467
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 119/244 (48%), Gaps = 14/244 (5%)
Query: 46 LAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVE 105
+A+TGTNGKST + ++ G + +GGN+G + P +F V VE
Sbjct: 117 IAITGTNGKSTTTALIAHIIKATGRDMQLGGNIGTAI------LTLEPPCADRFYV--VE 168
Query: 106 VSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFGN 165
SSYQ+++ PT ++LNLTPDHL+RH +M+NYA K L + +G+
Sbjct: 169 CSSYQIDL-APSLNPTAGILLNLTPDHLDRHGSMENYAAIKERLVAASGTAIIGIDDAYC 227
Query: 166 QHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQL-QLHNM-KVMGRHNY 223
Q + + + G + I + A A G + ++ L + + G HN
Sbjct: 228 QVIADRLHGAGIRVVRISKEKHLDRGYFADGAKLLWAQDGEIDEIASLEGIGSLRGAHNA 287
Query: 224 HNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEAT 283
NA A ++ L G+ +E +++ ++ HRM+ V R + V +V+DSKATN EAT
Sbjct: 288 QNALAAIVAC--LSAGLSLEEIHAGLKSFPGLAHRMEQVGRRGK-VLFVNDSKATNAEAT 344
Query: 284 CTGL 287
L
Sbjct: 345 APAL 348
>gi|255536592|ref|YP_003096963.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Flavobacteriaceae
bacterium 3519-10]
gi|255342788|gb|ACU08901.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Flavobacteriaceae
bacterium 3519-10]
Length = 457
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 146/302 (48%), Gaps = 59/302 (19%)
Query: 23 QSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPL 82
Q R+ SE++FA++ + KI+A+TG+NGK+T + + +L + G++ +GGN+G
Sbjct: 93 QKDIRLSSEIEFASEFT--NAKIIAITGSNGKTTTTSLIYHILKNDGLKVGLGGNIGKSF 150
Query: 83 SEAAFHCIALPSSKPKFQVAVVEVSSYQM-EIPNKYFCPTVSVVLNLTPDHLERHK-TMK 140
++ + F V+EVSS+Q+ +I N F P +S++LNL+ DHL+++ +
Sbjct: 151 AKQV--------ADESFDYYVLEVSSFQLDDIQN--FRPHISLLLNLSQDHLDQYNYNYE 200
Query: 141 NYALTKCHLFSHMVNT---------------------KLGLLPFGNQHLNEAIKGHRFNL 179
YAL K + + N K ++PF L E +K F
Sbjct: 201 EYALAKFRIAENQENDNFFIYNKDDEMSQNLLEKLEVKAKMIPFS---LKEKLKEGGF-- 255
Query: 180 AWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIG 239
F G K+ V + + + + ++G HN N+ A S+ G +
Sbjct: 256 -----FTGDKM----------VVKLQDEFSMDIAELALVGNHNVANSLAA--SIAGKILK 298
Query: 240 VDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILL 299
+ E++ +++ + HR++ V + GV +++DSKATN+ AT L +K V ++
Sbjct: 299 ISNESIRNSLMTFQAVQHRLEQVA-ETGGVRFINDSKATNVNATYYALESMK-QPTVWIV 356
Query: 300 GG 301
GG
Sbjct: 357 GG 358
>gi|237742552|ref|ZP_04573033.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Fusobacterium sp.
4_1_13]
gi|229430200|gb|EEO40412.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Fusobacterium sp.
4_1_13]
Length = 454
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 142/325 (43%), Gaps = 67/325 (20%)
Query: 9 LEFQLKATGLAC------LLQSGKRVMSELDFAAQVIPRS---IKILAVTGTNGKSTVVT 59
+EF +K+ G+ + + G +++ E++ A + KI+A+TGTNGKST
Sbjct: 70 IEFFIKSPGIPYNNFVKEVQKRGIKILDEIEIAYNYMIEKGMKTKIIAITGTNGKSTTTA 129
Query: 60 FVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQME-IPNKYF 118
+ MLNH G A GN+G LSE + +E+SS+Q+E I N F
Sbjct: 130 KISDMLNHAGYRAAYAGNIGRSLSEVLL-------KEKDLDFISLELSSFQLENIEN--F 180
Query: 119 CPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFN 178
P +S+++N+ PDH+ER+ + Y TK ++ K +
Sbjct: 181 KPYISMIINMGPDHIERYNSFDEYYDTKFNI----------------------TKNQTED 218
Query: 179 LAWIGAFPGVKIDTEAK--------TASFEVPAV---------GVVSQLQLHNMKVMGRH 221
L +I V+I+ AK + F+ + G S + + + + G H
Sbjct: 219 LYFIENIDDVEIEKRAKQIKAKRISVSKFKKADIFVKNDKICHGENSIIDVDKLSLKGIH 278
Query: 222 NYHNA--AVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATN 279
N N VA +L +D E L + I HR ++ + V +++DSKATN
Sbjct: 279 NLENTLFMVATAEIL----KIDREKLKEFLMIATPLEHRTELFF-NYGKVKFINDSKATN 333
Query: 280 LEATCTGLMDLKGHKCVILLGGQAK 304
+++T + K +++ GG K
Sbjct: 334 VDSTKFAIQANKN--SILICGGYDK 356
>gi|402311864|ref|ZP_10830795.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Lachnospiraceae
bacterium ICM7]
gi|400371011|gb|EJP23990.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Lachnospiraceae
bacterium ICM7]
Length = 448
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 133/265 (50%), Gaps = 21/265 (7%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
++A+TGTNGK+T + VG+++++ +F GN+G P ++ A + V V+
Sbjct: 107 LIAITGTNGKTTTTSLVGEIMSNFAKSSFTVGNIGIPYTDIA-------DKTDEDSVTVL 159
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFG 164
E SS+Q+E F P +S +LN+TPDHL RH TM+NY K ++ + +L +
Sbjct: 160 ETSSFQLETIID-FRPNISAILNITPDHLNRHHTMENYIKVKEYISKNQTEDDFCILNYE 218
Query: 165 NQHLNEAIKGHRFNLAWIGAFP----GVKIDTEAKTASFEVPAVGVVSQ-LQLHNMKVMG 219
++ L E + + + + G +D + S + GV + L + ++G
Sbjct: 219 DEALREFADRVKAKVVFFSSKRKLENGFYLDKDIIMQSKD----GVAKEILDTKKLNILG 274
Query: 220 RHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATN 279
RHNY N V A + GV ++++ ++ HR++ V +++ GV + +DSK TN
Sbjct: 275 RHNYEN--VMAAIAISSSYGVPIDSIVNSCYAFHAVEHRIEFV-KEVNGVRYYNDSKGTN 331
Query: 280 LEATCTGLMDLKGHKCVILLGGQAK 304
+A ++ + I+ GG K
Sbjct: 332 PDAAIQAVLAMPA-ATYIIAGGYDK 355
>gi|348590588|ref|YP_004875050.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Taylorella
asinigenitalis MCE3]
gi|347974492|gb|AEP37027.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Taylorella
asinigenitalis MCE3]
Length = 481
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 91/295 (30%), Positives = 142/295 (48%), Gaps = 41/295 (13%)
Query: 27 RVMSELDFAAQVI-------PRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLG 79
+++SE+D I IKI+ +TGTNGK+TV + V M + G++A GN
Sbjct: 102 KIISEIDLFMHAILEHNKANSTPIKIIGITGTNGKTTVTSMVRLMCEYSGLKAVAAGN-- 159
Query: 80 NPLSEAAFHCIALPSSKPKFQVAV-VEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKT 138
+S +A I+ + K+ A+ +E+SS Q+ ++ S +LN+T DH++ H +
Sbjct: 160 --ISPSALTVISEFEQQNKWPDAIALELSSAQLFYTSELKL-DASTILNITQDHIDWHGS 216
Query: 139 MKNYALTKCHLFSHMVNTKLGLLPFGNQHL--NEAIKGHRFNLAWI--GAFPGVKIDTEA 194
M+ Y +K +F F Q + +E K + N AWI A P E
Sbjct: 217 MQAYTESKLKIFD-----------FSEQIIASDEQAKEYGLNKAWIYTEALP----QKEN 261
Query: 195 KTASFEVPAVGVVSQLQ-----LHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTI 249
+ EV + Q + MK+ G HN N A+AA+ L +G+ +E L + +
Sbjct: 262 EIGVNEVNGMKWFCTTQKNLMPVDAMKIRGHHNVLN-AMAAIQ-LCQSVGLPLEPLLAAL 319
Query: 250 EILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
PHR V RDI GV ++DDSK TN+ AT + D V++LGG+ K
Sbjct: 320 RDYEAQPHRCTYV-RDINGVIFIDDSKGTNVGATVAAI-DGMYRNLVVILGGEGK 372
>gi|404403189|ref|ZP_10994773.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Pseudomonas
fuscovaginae UPB0736]
Length = 448
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 128/269 (47%), Gaps = 31/269 (11%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+A+TG+N KSTV T VG+M G VGGNLG P AL + V+
Sbjct: 111 IVAITGSNAKSTVTTLVGEMAAAAGKRVAVGGNLGTP---------ALDLLGDDIDLYVL 161
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSH----MVNTKLGL 160
E+SS+Q+E + V+ VLN++ DH++R+ + Y L K +F +VN + L
Sbjct: 162 ELSSFQLETTEQ-LNAEVATVLNISEDHMDRYSGLPAYHLAKHRIFRGAKQVVVNRQDAL 220
Query: 161 LPFGNQHLNEAIKGHRFNLAW--IGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVM 218
++E + F L F GV+ + K FE + + +H +K+
Sbjct: 221 ---SRPLMSEGLPCWTFGLGKPDFKTF-GVREENGEKYLGFEFQNL-----MPVHELKIR 271
Query: 219 GRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKAT 278
G HN NA A G +G+ +A+ S++ HR Q V R+ GV + +DSKAT
Sbjct: 272 GAHNQSNALAALAL--GHAVGLPFDAMLSSLRTFAGLEHRCQWV-REHHGVNYYNDSKAT 328
Query: 279 NLEATCTGLMDLK---GHKCVILLGGQAK 304
N+ A + L G K V++ GG K
Sbjct: 329 NVGAALAAIEGLGADIGGKLVLIAGGDGK 357
>gi|339302001|ref|ZP_08651074.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Streptococcus
agalactiae ATCC 13813]
gi|319744582|gb|EFV96935.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Streptococcus
agalactiae ATCC 13813]
Length = 455
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 155/310 (50%), Gaps = 33/310 (10%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V++E++ A V +++ +TG+NGK+T T + ++LN G + GN+G P SE
Sbjct: 103 VLTEVELAYLV--SESQLIGITGSNGKTTTTTMIAEVLNAGGQRGLLAGNIGFPASEVV- 159
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
+ + V+E+SS+Q+ + K F P ++V+ NL P HL+ H + ++Y K
Sbjct: 160 ------QAADDKDILVMELSSFQL-MGVKEFRPHIAVITNLMPTHLDYHGSFEDYVAAKW 212
Query: 148 HLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGV-KID---TEAKTASFEVPA 203
++ + M ++ +L F NQ +++ + + A I F K+D + K ++
Sbjct: 213 NIQNQMSSSDFLVLNF-NQGISKELA--KTTKATIVPFSTTEKVDGAYVQDKQLFYKGEN 269
Query: 204 VGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVH 263
+ + + ++ V G HN N A+A ++V L G+ + + T+ HR+Q +
Sbjct: 270 I-----MSVDDIGVPGSHNVEN-ALATIAVAKL-AGISNQVIRETLSNFGGVKHRLQSLG 322
Query: 264 RDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPLN- 322
+ + G+++ +DSK+TN+ AT L K +++ GG + N F++LI +
Sbjct: 323 K-VHGISFYNDSKSTNILATQKALSGFDNTKVILIAGGLDR------GNEFDELIPDITG 375
Query: 323 -HHRCVITEC 331
H V+ E
Sbjct: 376 LKHMVVLGES 385
>gi|78779845|ref|YP_397957.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
[Prochlorococcus marinus str. MIT 9312]
gi|118595673|sp|Q319C4.1|MURD_PROM9 RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|78713344|gb|ABB50521.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Prochlorococcus
marinus str. MIT 9312]
Length = 468
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 137/284 (48%), Gaps = 33/284 (11%)
Query: 31 ELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCI 90
E++ A +++ + + +TGTNGK+TV + +L + A GN+G PL + A+
Sbjct: 109 EINVAWEIL-KETNWIGITGTNGKTTVTHLLSHILCENKLYAPFAGNIGTPLCKYAY--- 164
Query: 91 ALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLF 150
K V E+SSYQ+EI + P + + T DHLERHKT++NY K L
Sbjct: 165 --SKKYEKIDWVVAELSSYQIEISPE-VKPNIGIWTTFTEDHLERHKTLENYFNIKKSL- 220
Query: 151 SHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQ- 209
+ + + + +++L + H +L+ GV I T ++F + Q
Sbjct: 221 --LEKSDFRIYNYDDKNL----RNHYSSLS-----KGVWITTSLDKSNFIQCDYWIDDQA 269
Query: 210 ---------LQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQ 260
+L + + G HN N + + +G+ + + ++ + PHRM+
Sbjct: 270 FIIERGKRLFKLEHFSLKGIHNLQNLLLVIAA--ARKVGLSGKKIKDSLSNYKQLPHRME 327
Query: 261 IVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
++++ + ++DSKATN +++ G+ ++G + +I+ GG+ K
Sbjct: 328 TIYKN-NDLEIINDSKATNFDSSIAGINSIEG-QIIIISGGRLK 369
>gi|389694279|ref|ZP_10182373.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Microvirga sp.
WSM3557]
gi|388587665|gb|EIM27958.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Microvirga sp.
WSM3557]
Length = 463
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 138/293 (47%), Gaps = 31/293 (10%)
Query: 36 AQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSS 95
A++ P + +A+TGTNGKST + +L G + +GGN+G A + PS
Sbjct: 108 AKIAPNA-PFVAITGTNGKSTTTALIAHILREAGRDVQMGGNIGT-----AILSLEPPSD 161
Query: 96 KPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVN 155
++ V+E SS+Q+++ PT+ V LNL+PDH++RH TM+ YA K L +
Sbjct: 162 D---RIHVIECSSFQIDL-TPSLAPTIGVHLNLSPDHIDRHGTMELYAAIKERLVAKAGL 217
Query: 156 TKLGLLPFGNQHLNEAIKGHRFNLAWIGAFP----GVKIDTEAKTASFEVPAVGVVSQLQ 211
+G+ ++ + EA + N+A + P GV D E + A +
Sbjct: 218 AVIGVDDPMSRAIAEACEARGVNVARVSVEPLGTKGVFADGETLVGVTDTDAAPMAGLSG 277
Query: 212 LHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTW 271
+ ++ R ++ AA + L + V E + S + PHRM+ V R I+ +
Sbjct: 278 IGSL----RGAHNAQNAAAAVAVALALNVSPETIRSGLSTFPGLPHRMEEVGR-IRDALF 332
Query: 272 VDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPLNHH 324
++DSKATN ++T L +LGG+AK E IEPL +
Sbjct: 333 INDSKATNADSTEKALKSFD--SIFWILGGKAK----------EGGIEPLRSY 373
>gi|422883602|ref|ZP_16930051.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Streptococcus
sanguinis SK49]
gi|332362875|gb|EGJ40668.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Streptococcus
sanguinis SK49]
Length = 459
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 134/281 (47%), Gaps = 29/281 (10%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+ +TG+NGK+T T + Q+L G + GN+G P S+ A SSK V+
Sbjct: 123 IVGITGSNGKTTTTTMIAQVLTAGGQNGLLSGNIGFPASQVAQTA----SSKDTL---VM 175
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFG 164
E+SS+Q+ + + P ++V+ NL P HL+ H ++++YA K ++ +M +L F
Sbjct: 176 ELSSFQL-MGIEALHPQIAVITNLMPTHLDYHGSLEDYAAAKWNIQKNMTADDYLVLNFN 234
Query: 165 NQHLNEAIKGHRFNLAWIGAFPGV-KIDT---EAKTASFEVPAVGVVSQLQLHNMKVMGR 220
E + A + F K+D E +F A+ +Q + V G
Sbjct: 235 QDWAKEMASQTQ---ATVMPFSTTEKVDGAYLEGDVLTFRGEAI-----MQAAEIGVPGS 286
Query: 221 HNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNL 280
HN N A+A ++V L G+D + + + HR+Q V R + V + +DSK+TN+
Sbjct: 287 HNVEN-ALATIAVAKLR-GIDNQTIKEVLSAFGGVKHRLQYVGR-VNEVAFYNDSKSTNI 343
Query: 281 EATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPL 321
AT L K +++ GG + N F++L+ L
Sbjct: 344 LATQKALSGFDNSKVILIAGGLDR------GNEFDELVPDL 378
>gi|371778096|ref|ZP_09484418.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Anaerophaga sp.
HS1]
Length = 450
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 150/289 (51%), Gaps = 29/289 (10%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
+ Q G ++SE++FA + K++ +TG+NGK+T T+ M+ G + + GN+G
Sbjct: 83 IRQKGIPIISEIEFAGRF--SKAKMIGITGSNGKTTTATWTYHMIKKGGKDVRLAGNIGT 140
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK-TM 139
L A H I SS P ++ V+E+SS+Q+E + C V+V+ NL+PDHL+R+
Sbjct: 141 SL---ARHLI---SSDP--ELFVLELSSFQLEDMYDFKC-DVAVITNLSPDHLDRYDYRF 191
Query: 140 KNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIG-AFPGVKIDTEAKTAS 198
+ Y K + ++ + K + + N H E +K ++ + G +P D + A
Sbjct: 192 EKYVDAKFRILNN--HDKQSVFIY-NAHDQEIMK-RMGDMQYPGIRYPFALSDVYGQGAC 247
Query: 199 FEVPAVGVVSQLQ------LHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEIL 252
E + V+ L+ L+ + + G+HN N A+L+ L +D ++A+ ++
Sbjct: 248 VEYEQM-VIKTLENRVTFPLNQLALSGKHNICNGMAASLAALSVD--TPIQAVIEGLKDF 304
Query: 253 RTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGG 301
HR++ V ++ GV +++DSKATN+++ L + K V+ + G
Sbjct: 305 DGVEHRLESVD-EVNGVLYINDSKATNVDSVWYALESM--DKPVVWIAG 350
>gi|424047931|ref|ZP_17785487.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HENC-03]
gi|408883241|gb|EKM22028.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Vibrio cholerae
HENC-03]
Length = 437
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 146/309 (47%), Gaps = 39/309 (12%)
Query: 25 GKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSE 84
G V+ +++ A + + + +A+TG+NGKSTV G + G+ VGGN+G P
Sbjct: 92 GTPVVGDIELFAWAVDKPV--IAITGSNGKSTVTDLTGVLAKAAGLTVGVGGNIGVP--- 146
Query: 85 AAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYAL 144
AL + + V+E+SS+Q+E + LNL+ DH++R+ M +Y
Sbjct: 147 ------ALDLLEQDADLYVLELSSFQLET-TASLKLKAAAFLNLSEDHMDRYDGMADYRQ 199
Query: 145 TKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFP---GVKIDTEAKTASFEV 201
K +F N +L ++ N+ E L G+ G+++D +T +
Sbjct: 200 AKLRIFD---NAELAVV---NRDDRETFPETETPLVTFGSDEQAYGLEVDGN-RTWLLDH 252
Query: 202 PAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTP---PHR 258
+ S +K++G+HN N AL VL L DV+ L S + L+T HR
Sbjct: 253 GQRVIASD----ELKLVGKHNLAN----ALVVLALLKAADVDYLKS-LNALKTYTGLTHR 303
Query: 259 MQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGH-KCVILLGGQAKVLNGQESNGFEKL 317
Q+V D +GV WV+DSKATN+ +T L L+ K +L+GG K G + + +
Sbjct: 304 CQVVA-DNRGVKWVNDSKATNIASTMAALSGLESTGKLYLLVGGVGK---GADFTPLKPI 359
Query: 318 IEPLNHHRC 326
LN C
Sbjct: 360 FATLNLQLC 368
>gi|417092864|ref|ZP_11957377.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
suis R61]
gi|353532134|gb|EHC01809.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
suis R61]
Length = 449
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 136/277 (49%), Gaps = 21/277 (7%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+ +TG+NGK+T T + ++LN A + GN+G P S A A + V+
Sbjct: 114 IVGITGSNGKTTTTTMIAEVLNVGNKPAKLCGNIGYPASSVAQTATAEDT-------LVM 166
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFG 164
E+SS+Q+ + + F P ++VV NL H++ H T ++Y + K + M +L F
Sbjct: 167 ELSSFQL-MGTESFHPHIAVVTNLIASHIDYHGTFEDYVVAKWMIQRQMTAEDFVVLNFN 225
Query: 165 NQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYH 224
+ E + + A + F +++ A A ++ G + + V G HN
Sbjct: 226 QKEAKELAEQTK---ATVVPFSTLEVVDGAYLADGKLYFKGEYI-MDADQIGVPGSHNVE 281
Query: 225 NAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATC 284
N A+A + V L +GVD +A+ ++ + HR+Q V +I GV++ +DSK+TN+ AT
Sbjct: 282 N-ALATIVVAKL-MGVDNQAIQESLSVFGGVKHRLQFVG-EINGVSFYNDSKSTNILATQ 338
Query: 285 TGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPL 321
L K +++ GG + N F++L+ L
Sbjct: 339 KALSGFDNSKVILIAGGLDR------GNEFDELVPDL 369
>gi|340622896|ref|YP_004741348.1| D-glutamic acid-adding enzyme [Capnocytophaga canimorsus Cc5]
gi|339903162|gb|AEK24241.1| D-glutamic acid-adding enzyme [Capnocytophaga canimorsus Cc5]
Length = 444
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 142/290 (48%), Gaps = 36/290 (12%)
Query: 27 RVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAA 86
++SE++FA + KI+A+TG+NGK+T + +L G+ V GN+G +
Sbjct: 88 EIISEIEFAYRYTKG--KIIAITGSNGKTTTTSLTYHILKESGLNVGVAGNIGK-----S 140
Query: 87 FHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK-TMKNYALT 145
F + K + V+E+SS+Q++ F P ++++LN+TPDHL+R+ M+NY +
Sbjct: 141 FAQMVAEDDKEYY---VLEISSFQLDGITS-FKPHIAILLNITPDHLDRYDYKMENYIAS 196
Query: 146 KCHLFSHMVN----TKLGLLPFGNQHLNE-AIKGHRFNLAWIGAFPGVKIDTEAKTASFE 200
K + + P Q L + IK + + I+ E +
Sbjct: 197 KFRITENQTEDDYFIYDIDDPIIAQWLEKNEIKSQKIPFS---------IEKELNKGIYS 247
Query: 201 VPAV------GVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRT 254
+ + ++++ M + G+HN N+ A++S L V E++ +++
Sbjct: 248 LKDIIHMNIDNQTFEIEVKEMSLKGKHNVKNSMAASVSSRLLK--VRKESIRESLKGFVG 305
Query: 255 PPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
PHR++ V + ++G+T+++DSKATN+ + L +K V ++GG K
Sbjct: 306 EPHRLEFV-KTVEGITYINDSKATNVNSVFFALDTMKT-PVVWIVGGVDK 353
>gi|268680459|ref|YP_003304890.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Sulfurospirillum
deleyianum DSM 6946]
gi|268618490|gb|ACZ12855.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Sulfurospirillum
deleyianum DSM 6946]
Length = 397
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 132/297 (44%), Gaps = 45/297 (15%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
L+Q V SE DF + +P SI I +GTNGK+T +L G A GGN+G
Sbjct: 67 LIQKALHVTSEYDFFKEAMPFSIWI---SGTNGKTTTTQMCQFLLEKQG--AVAGGNIGT 121
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMK 140
PL+E L P + V+E SS+ K P + ++L + PDHL H +M+
Sbjct: 122 PLAE-------LDEKAP---IWVLETSSFTFHY-TKVTAPDMYLLLPIKPDHLTWHGSME 170
Query: 141 NYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFE 200
Y K + M + +LP K H + T A ++E
Sbjct: 171 AYIDAKLSPLARMKEGSVAILP----------KAH------------ANVKTLAHVIAYE 208
Query: 201 VPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLG-LDIGVDVEALNSTIEILRTPPHRM 259
+ QL + K+ + + AV A+S L +D E +N+ + +++
Sbjct: 209 NEE-DLAQQLGIELSKINFKTPFLLDAVLAMSAQKVLFDTIDYERINT----FKIDHYKI 263
Query: 260 QIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEK 316
+ H D QG WVDDSK TN++AT L K + +++LGG K ++ QE F K
Sbjct: 264 EEFH-DKQGRLWVDDSKGTNVDATIEALKRYKDEEILLVLGGDDKGVDLQELFDFMK 319
>gi|393778951|ref|ZP_10367208.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Capnocytophaga
sp. oral taxon 412 str. F0487]
gi|392611133|gb|EIW93883.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Capnocytophaga
sp. oral taxon 412 str. F0487]
Length = 444
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 151/316 (47%), Gaps = 33/316 (10%)
Query: 23 QSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPL 82
+ G V+SE++FA+Q I + +TG+NGK+T + G++ +GGN+G
Sbjct: 84 EKGIAVISEIEFASQYTDSLI--VGITGSNGKTTTTLLTHHIFKEAGLQVGLGGNIGYSF 141
Query: 83 SEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK-TMKN 141
+E + + P + V+E+SS+Q++ ++F P ++V+LN+TPDHL+R+ +N
Sbjct: 142 AE------LVATENPPYY--VLEISSFQLD-GIEHFAPHIAVLLNITPDHLDRYDYKFEN 192
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASF-- 199
Y +K + + + ++ + + + H I I+ E +F
Sbjct: 193 YINSKFRIAMNQTENDYLIYDADDEVITQWLSTHTIKSKLI----PFSIEKELPQGAFLK 248
Query: 200 ----EVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTP 255
+ +++ + + + G+HN N A SV + + +L +++ +
Sbjct: 249 DNKIYIMLENQTTEIDVEEISLRGKHNIKNTMAA--SVAARLVNIRNNSLRESLKGFKGA 306
Query: 256 PHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFE 315
PHR++ V + + GVT+V+DSKATN+ + L +K V ++GGQ K N +
Sbjct: 307 PHRLEEV-KVVDGVTYVNDSKATNVNSVFYALDTIK-TPIVWIVGGQDK------GNDYN 358
Query: 316 KLIEPLNHHRCVITEC 331
L+ P H + C
Sbjct: 359 SLL-PYVHEKVRAIVC 373
>gi|430750520|ref|YP_007213428.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Thermobacillus
composti KWC4]
gi|430734485|gb|AGA58430.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Thermobacillus
composti KWC4]
Length = 473
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 142/296 (47%), Gaps = 33/296 (11%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L+ G +++E++ A + I+ +TG+NGK+T T +G++L G + V GN+G P
Sbjct: 93 LELGIEIVTEVEVAWWLT--DAPIIGITGSNGKTTTTTLIGKLLEAAGRKTIVAGNIGRP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
L++AA A V E+SS+Q++ F P +SV+ N+ HL+ H M +
Sbjct: 151 LTDAAREAGA-------DSWLVAELSSFQLK-GTSAFRPRISVLTNVAETHLDYHGGMDD 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWI--------GAF------PG 187
Y +K LF++ + ++ + + +G R + G F P
Sbjct: 203 YTASKAKLFANQTEEDIAVVNWDDPECRRLAEGIRARIVPFAIRQRLEEGVFVDPPYPPS 262
Query: 188 VKIDTEAKTASFEVPAVGVVSQ--LQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEAL 245
+ D ++T V G VS + + + + GRHN NAA AA + L GV EAL
Sbjct: 263 PEDDGASRTI---VRRTGGVSTAIIAVDELGIPGRHNAANAAAAAAAA--LAAGVPAEAL 317
Query: 246 NSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGG 301
+ + R HR++ V R+ G+ + + SK TN AT + +KG V+L GG
Sbjct: 318 AAPLRAFRGVEHRLEFV-REKAGIRFYNSSKDTNPTATTMAIRSVKG-PVVLLAGG 371
>gi|90580226|ref|ZP_01236033.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
[Photobacterium angustum S14]
gi|90438528|gb|EAS63712.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Vibrio
angustum S14]
Length = 446
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 158/333 (47%), Gaps = 46/333 (13%)
Query: 5 WLFLLEFQLKATGLACLL-------QSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTV 57
WL + + + G+A ++G ++ +++ A+ + + ++A+TG+NGKSTV
Sbjct: 65 WLLSADLIVASPGIALATPELVLAAEAGVEIIGDIELFAREVDK--PVVAITGSNGKSTV 122
Query: 58 VTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY 117
+ VG+M GI VGGN+G AL + + V+E+SS+Q+E
Sbjct: 123 TSLVGEMAKEAGINVGVGGNIG---------FAALDMLAQQHSLYVLELSSFQLETTTSL 173
Query: 118 FCPTVSVVLNLTPDHLERHK-TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHR 176
T +V LNL+ DH++R+ + Y+ K +F H KL + F L A K +
Sbjct: 174 EL-TAAVYLNLSEDHMDRYPGGLAQYSQAKMRIFDH---AKLAV--FNRDDL--ATKPTQ 225
Query: 177 FNLAWIGAFPGVKIDTEAKTASF----EVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALS 232
F+ GA D + E AV + + + ++ ++GRHN N A
Sbjct: 226 FS----GAMTSFGFDDQDYGIVLVNGKEWLAVNGEAVMAVADIALVGRHNVANCLAALAL 281
Query: 233 VLGLDIGVDVEALNSTIEILRTPPHRMQI-VHRDIQGVTWVDDSKATNLEATCTGL--MD 289
G+ +A ++ HR Q+ V+R GV WV+DSKATNL +T L +
Sbjct: 282 ADA--AGIPRDAACRAMQRYTGLAHRCQLAVNR--HGVRWVNDSKATNLASTLAALNGLQ 337
Query: 290 LKGHKCVILLGGQAKVLNGQESNGFEKLIEPLN 322
L+G K +L+GG +K G E + + ++ LN
Sbjct: 338 LEG-KLHLLMGGDSK---GAEFSELKPVLADLN 366
>gi|322517040|ref|ZP_08069927.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Streptococcus
vestibularis ATCC 49124]
gi|322124387|gb|EFX95889.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Streptococcus
vestibularis ATCC 49124]
Length = 450
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 133/281 (47%), Gaps = 35/281 (12%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+ +TG+NGK+T T + +LN+ G + GN+G P SE A S V+
Sbjct: 114 IIGITGSNGKTTTTTMIADVLNYGGKSGVLSGNIGFPASEVA-------QSVTNQDTLVM 166
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFG 164
E+SS+Q+ + + F P ++V+ NL P H++ H + + Y K ++ + M + +L F
Sbjct: 167 ELSSFQL-MGIESFHPHIAVITNLMPTHIDYHGSFEGYVAAKWNIQNKMTSDDFVILNF- 224
Query: 165 NQHLNEAIKGHRFNLAWIGAFPGV-KIDTEAKTASFEVPAVGVVSQLQLH--NMKVMGRH 221
NQ L + + A + F V K+D A E + +L +H + V G H
Sbjct: 225 NQDLAKELATQTN--AQVVPFSTVEKVD----GAYLENGGLYFKGELVMHADELGVPGSH 278
Query: 222 NYHNA----AVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKA 277
N NA AVA LS V +A+ T+ HR+Q V I V + +DSK+
Sbjct: 279 NVENALATIAVAKLS------SVSNQAIKETLSSFGGVKHRLQFVDT-IDNVKFYNDSKS 331
Query: 278 TNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLI 318
TN+ AT L K +++ GG + N F++LI
Sbjct: 332 TNILATQKALSGFDNSKVILIAGGLDR------GNEFDELI 366
>gi|377577162|ref|ZP_09806145.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Escherichia
hermannii NBRC 105704]
gi|377541690|dbj|GAB51310.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Escherichia
hermannii NBRC 105704]
Length = 438
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 132/283 (46%), Gaps = 63/283 (22%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+A+TG+NGKSTV T VG+M G+ VGGN+G P AL P+ ++ V+
Sbjct: 107 IVAITGSNGKSTVTTLVGEMAKAAGVSVGVGGNIGLP---------ALMLLDPEKELYVL 157
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK-TMKNYALTKCHLFSH----MVNTKLG 159
E+SS+Q+E + VLN+T DH++R+ ++ Y K ++ + +VN
Sbjct: 158 ELSSFQLETTYSLRAKAAN-VLNVTEDHMDRYPFGLQQYRAAKLKIYENAQVCVVNADDA 216
Query: 160 L---------------LPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAV 204
L + G+ HLN H+ W+ G KI
Sbjct: 217 LTMPVRGADERCVSFGIDVGDYHLN-----HQQGDTWL-RVKGEKI-------------- 256
Query: 205 GVVSQLQLHNMKVMGRHNYHN--AAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIV 262
L MK++GRHNY N AA+A +GL ++AL + + HR Q+
Sbjct: 257 -----LNAKEMKIVGRHNYTNALAALALADAVGLPRSSSLQALTTFTGL----AHRFQLA 307
Query: 263 HRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCV-ILLGGQAK 304
+ D GV W++DSKATN+ +T L L + +LLGG K
Sbjct: 308 Y-DHNGVRWINDSKATNVGSTEAALNGLHVDGTLHLLLGGDGK 349
>gi|25010591|ref|NP_734986.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
agalactiae NEM316]
gi|77413561|ref|ZP_00789749.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
agalactiae 515]
gi|30316027|sp|Q8E6P1.1|MURD_STRA3 RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|23094944|emb|CAD46166.1| Unknown [Streptococcus agalactiae NEM316]
gi|77160390|gb|EAO71513.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
agalactiae 515]
Length = 451
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 155/310 (50%), Gaps = 33/310 (10%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V++E++ A V +++ +TG+NGK+T T + ++LN G + GN+G P SE
Sbjct: 99 VLTEVELAYLV--SESQLIGITGSNGKTTTTTMIAEVLNAGGQRGLLAGNIGFPASEVV- 155
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
+ + V+E+SS+Q+ + K F P ++V+ NL P HL+ H + ++Y K
Sbjct: 156 ------QAADDKDILVMELSSFQL-MGVKEFRPHIAVITNLMPTHLDYHGSFEDYVAAKW 208
Query: 148 HLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGV-KID---TEAKTASFEVPA 203
++ + M ++ +L F NQ +++ + + A I F K+D + K ++
Sbjct: 209 NIQNQMSSSDFLVLNF-NQGISKELA--KTTKATIVPFSTTEKVDGAYVQDKQLFYKGEN 265
Query: 204 VGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVH 263
+ +V ++ V G HN N A+A ++V L G+ + + T+ HR+Q +
Sbjct: 266 IMLVD-----DIGVPGSHNVEN-ALATIAVAKL-AGISNQVIRETLSNFGGVKHRLQSLG 318
Query: 264 RDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPLN- 322
+ + G+++ +DSK+TN+ AT L K +++ GG + N F++LI +
Sbjct: 319 K-VHGISFYNDSKSTNILATQKALSGFDNTKVILIAGGLDR------GNEFDELIPDITG 371
Query: 323 -HHRCVITEC 331
H V+ E
Sbjct: 372 LKHMVVLGES 381
>gi|238797708|ref|ZP_04641203.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Yersinia
mollaretii ATCC 43969]
gi|238718460|gb|EEQ10281.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Yersinia
mollaretii ATCC 43969]
Length = 438
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/265 (31%), Positives = 131/265 (49%), Gaps = 27/265 (10%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+A+TG+NGKSTV T VG+M G + VGGN+G P AL K + Q+ V+
Sbjct: 107 IVAITGSNGKSTVTTLVGEMAKAAGWQVGVGGNIGVP---------ALTLLKQENQLVVL 157
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK-TMKNYALTKCHLFSHMVNTKLGLLPF 163
E+SS+Q+E + + +LN+T DH +R+ ++ Y K ++ N K+ ++
Sbjct: 158 ELSSFQLETTTSLRA-SAATILNVTEDHTDRYPFGLQQYRAAKLRVYE---NAKVCVVN- 212
Query: 164 GNQHLNEAIKGHRFNLAWIGAFPG-VKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHN 222
+ L ++G G G ++ + V V L MK+ GRHN
Sbjct: 213 ADDALTMPVRGADSRCISFGVDVGDYHLNKQQGEIWLRVQGEKV---LNTREMKLTGRHN 269
Query: 223 YHN--AAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNL 280
Y N AA+A +G+ ++AL + + PHR Q+V GV W++DSKATN+
Sbjct: 270 YTNALAALALADAVGIPRSSSLKALTTFTGL----PHRFQLVFEH-NGVRWINDSKATNV 324
Query: 281 EATCTGLMDLKGHKCV-ILLGGQAK 304
+T L L+ + +LLGG K
Sbjct: 325 GSTEAALEGLQVDGTLHLLLGGDGK 349
>gi|315123985|ref|YP_004065989.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Campylobacter
jejuni subsp. jejuni ICDCCJ07001]
gi|315017707|gb|ADT65800.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Campylobacter
jejuni subsp. jejuni ICDCCJ07001]
Length = 402
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 132/286 (46%), Gaps = 47/286 (16%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
L+Q K + SE DF ++P+S+ I +GTNGK+T +L+H+G A +GGN+G
Sbjct: 71 LIQKAKNLQSEYDFFYDIMPKSVWI---SGTNGKTTTTQMATHLLSHIG--AVMGGNVGT 125
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMK 140
PL+E P ++ ++E SS+ + +K P + +L+++PDHL H +
Sbjct: 126 PLAEL----------DPYAKLWILETSSFTLHYTHKA-KPEIYALLSISPDHLSWHGSFD 174
Query: 141 NYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFE 200
NY K + M + +LP + N K H+ + VK + + SF+
Sbjct: 175 NYVQDKLSVLKRMNECDVAILP--KIYANTPTKAHKISYEDEKDL-AVKFGIDTEKISFK 231
Query: 201 VPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSV--LGLDIGVDVEALNSTIEILRTPPHR 258
P + A+ AL++ + LD + E LNS + ++
Sbjct: 232 SP--------------------FLLDAIMALAIEKILLDT-LSYELLNSFV----MEKNK 266
Query: 259 MQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
++ + +D Q WV+D+KATN A L K K +++GG K
Sbjct: 267 LEEL-KDSQNRLWVNDTKATNESAVMAALNRYKDKKIHLIIGGDDK 311
>gi|260893414|ref|YP_003239511.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Ammonifex degensii
KC4]
gi|260865555|gb|ACX52661.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Ammonifex degensii
KC4]
Length = 457
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 143/285 (50%), Gaps = 19/285 (6%)
Query: 23 QSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPL 82
++G ++ EL+ A + ++AVTGTNGK+T G + G+ +V GN+G PL
Sbjct: 87 EAGIEIVGELELAFRFA--RAPVVAVTGTNGKTTTTALTGAIFQAAGLRTWVAGNIGLPL 144
Query: 83 SEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNY 142
SE + ++P+ + VVEVSS+Q+E F P V+V+LNLTPDHL+RH +Y
Sbjct: 145 SE------VVEEARPE-DILVVEVSSFQLET-TSTFKPVVAVILNLTPDHLDRHGDFNSY 196
Query: 143 ALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVP 202
K +F+ + ++ +L + + + + + + V
Sbjct: 197 RQAKARIFARQTDKEVTVLNYDDPEVRNMAADSCGRVLFFSRRHKLATGVWVAKGEILVK 256
Query: 203 AVGVVSQL-QLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQI 261
GV ++ ++ ++ + G HN NA A + + + V +E + + + HR+++
Sbjct: 257 WEGVEGKVTEVASLALPGAHNLENALAATAAAVAQN--VPLEVIGRVLREFKGVAHRLEL 314
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILL--GGQAK 304
V +I GV +V+DSK TN EAT L+ + C I+L GG+ K
Sbjct: 315 VA-EINGVKYVNDSKGTNPEATIKA---LEAYDCPIVLIAGGRNK 355
>gi|163843689|ref|YP_001628093.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Brucella suis
ATCC 23445]
gi|163674412|gb|ABY38523.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Brucella suis ATCC
23445]
Length = 467
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 118/244 (48%), Gaps = 14/244 (5%)
Query: 46 LAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVE 105
+A+TGTNGKST + ++ G + +GGN+G + P +F V VE
Sbjct: 117 IAITGTNGKSTTTALIAHIIKATGRDMQLGGNIGTAI------LTLEPPCADRFYV--VE 168
Query: 106 VSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFGN 165
SSYQ+++ PT ++LNLTPDHL+RH +M+NYA K L + +G+
Sbjct: 169 CSSYQIDL-APSLNPTAGILLNLTPDHLDRHGSMENYAAIKERLVAASGTAIIGIDDAYC 227
Query: 166 QHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQL-QLHNM-KVMGRHNY 223
Q + + + G + I + A A G + ++ L + + G HN
Sbjct: 228 QAIADRLHGAGIRVVRISKEKHLDRGYFADGAKLLWAQDGEIDEIASLEGIGSLRGAHNA 287
Query: 224 HNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEAT 283
NA A ++ L G+ E +++ ++ HRM+ V R + V +V+DSKATN EAT
Sbjct: 288 QNALAAIVAC--LSAGLSREEIHAGLKSFPGLAHRMEQVGRRGK-VLFVNDSKATNAEAT 344
Query: 284 CTGL 287
L
Sbjct: 345 APAL 348
>gi|429740180|ref|ZP_19273885.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Prevotella
saccharolytica F0055]
gi|429154119|gb|EKX96870.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Prevotella
saccharolytica F0055]
Length = 443
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 155/313 (49%), Gaps = 34/313 (10%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
++ G ++SE++FA + K++ +TG+NGK+T + + + G + + GN+G
Sbjct: 83 IKKGIHIISEIEFAGRYT--HAKMVCITGSNGKTTTTSLIYHIFKAAGYDVGLAGNIGRS 140
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDHLERHK-TM 139
L AL ++ + V+E+SS+Q++ + Y F ++++LN+TPDHL+R+ M
Sbjct: 141 L--------ALQVAEDPHEYYVIELSSFQLD--DMYDFRANIAILLNITPDHLDRYDHCM 190
Query: 140 KNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASF 199
+NY +K + + + + + +K + N FP ++ + A
Sbjct: 191 QNYVDSKMRILQNQTAADSFIFWNDDPIIKNELKKYNINAF---QFPFSELKEKGSIAYI 247
Query: 200 EVPAVGVVS----QLQLHNMKVMGRHNYHNAAVAALSVLGLDI-GVDVEALNSTIEILRT 254
E + ++ ++ + G+HN +N+ A ++ +I G+ E + ++
Sbjct: 248 EEGQYKIEKPTPFNMEQESLSLTGKHNIYNSLAAGIAT---NIAGIKKEVIRKSLSDFPG 304
Query: 255 PPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGF 314
HR++ V + + GV +++DSKATN+ A L +K ++++GGQ K G +
Sbjct: 305 VEHRLEKVLK-VGGVQYINDSKATNVGACWYALESMKT-PTILIIGGQDK---GNDYTSI 359
Query: 315 EKLIEPLNHHRCV 327
++L++ +CV
Sbjct: 360 KQLVK----EKCV 368
>gi|422863105|ref|ZP_16909737.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Streptococcus
sanguinis SK408]
gi|327473405|gb|EGF18825.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Streptococcus
sanguinis SK408]
Length = 459
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 136/282 (48%), Gaps = 31/282 (10%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+ +TG+NGK+T T + Q+L G + GN+G P S+ A SSK + V+
Sbjct: 123 IIGITGSNGKTTTTTMIAQVLTAGGQNGLLSGNIGFPASQVAQTA----SSK---DMLVM 175
Query: 105 EVSSYQ-MEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPF 163
E+SS+Q M I + F P ++V+ NL P HL+ H +++ YA K ++ +M +L F
Sbjct: 176 ELSSFQLMGIED--FHPQIAVITNLMPTHLDYHGSVEEYAAAKWNIQKNMTADDYLVLNF 233
Query: 164 GNQHLNEAIKGHRFNLAWIGAFPGV-KIDT---EAKTASFEVPAVGVVSQLQLHNMKVMG 219
E + A + F K+D E +F A+ +Q+ + V G
Sbjct: 234 NQDWAKEMASQTQ---ATVVPFSTTEKVDGAYLEGDVLTFRGEAI-----MQVAEIGVPG 285
Query: 220 RHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATN 279
HN N A+A ++V L G+D + + + HR+Q V + + V + +DSK+TN
Sbjct: 286 SHNVEN-ALATIAVAKLR-GIDNQTIKEVLSAFGGVKHRLQYVGQ-VNEVAFYNDSKSTN 342
Query: 280 LEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPL 321
+ AT L K +++ GG + N F++L+ L
Sbjct: 343 ILATQKALSGFDNSKVILIAGGLDR------GNEFDELVPDL 378
>gi|157373549|ref|YP_001472149.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Shewanella
sediminis HAW-EB3]
gi|157315923|gb|ABV35021.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Shewanella
sediminis HAW-EB3]
Length = 443
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 136/282 (48%), Gaps = 42/282 (14%)
Query: 34 FAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALP 93
FA V R ++ +TG+NGKSTV T V +M GI VGGN+G P+ L
Sbjct: 100 FARAVKERDACVIGITGSNGKSTVTTLVAEMAKAAGINYAVGGNIGIPV---------LD 150
Query: 94 SSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHM 153
+ ++ V+E+SS+Q+E + C + + LN++ DH++R+ ++ Y K L+S
Sbjct: 151 LLQSDIELYVLELSSFQLETTHSLNCISAT-CLNISEDHMDRYSDIEAYRQAKLRLYSQ- 208
Query: 154 VNTKLGLLPFGNQ--HLNEAIKGHRFNLA------WIGAFPGVKIDTEAKTASFEVPAVG 205
T+ L ++ + + + F L+ W GV E K G
Sbjct: 209 --TRFALFNREDELTKPKDPMNQNSFGLSLPDNDEW-----GV---CEGKIVH------G 252
Query: 206 VVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQ-IVHR 264
V + L ++ ++G HN+ N +AA++ L G++ A+ HR + +V+R
Sbjct: 253 SVEVISLQDVALVGSHNHAN-LIAAMA-LAYQAGIEKAAMVEVASSFTGLEHRFEMVVNR 310
Query: 265 DIQGVTWVDDSKATNLEATCTGLMDLKGH--KCVILLGGQAK 304
+ GV +++DSKATN+ AT + + H +++ GG K
Sbjct: 311 N--GVAYINDSKATNVGATVAAIEGISEHLGDIILIAGGDGK 350
>gi|312622927|ref|YP_004024540.1| UDP-N-acetylmuramoylalanine/d-glutamate ligase
[Caldicellulosiruptor kronotskyensis 2002]
gi|312203394|gb|ADQ46721.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase
[Caldicellulosiruptor kronotskyensis 2002]
Length = 458
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 146/287 (50%), Gaps = 21/287 (7%)
Query: 23 QSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPL 82
+ G V+ E++ A + +S I+A+TGTNGK+T T VG++L + V GN+G P
Sbjct: 91 KKGIEVIGEIELAYRFC-KSKNIVAITGTNGKTTTTTLVGEILKKQYEDVVVCGNIGLPF 149
Query: 83 SEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNY 142
I + + + V+E+SS+Q+E KYF P V +LN+TPDHL RH TM+NY
Sbjct: 150 -------IDTIETSSEDTIFVLEISSFQLETI-KYFKPKVGCILNITPDHLNRHLTMENY 201
Query: 143 ALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGA----FPGVK-IDTEAKTA 197
K +F ++ +L + N + I + N+ F V ++ +
Sbjct: 202 TKAKMRIFENIDEMGYTVLNYDNNITRDLIGLAKGNVIVFSKTKTQFENVVFVENDVIYF 261
Query: 198 SFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPH 257
+FE V+ + ++ + G+HN N A+AA+S L G++ + + ++ R H
Sbjct: 262 TFEGKTQEVMKKDEIF---IPGQHNLEN-ALAAISCT-LPFGIEKDTIEQVLKTFRGVEH 316
Query: 258 RMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
R++ V +I G+ + +DSK TN +A L + + +++ GG K
Sbjct: 317 RIEFVA-EINGIKFYNDSKGTNTDAAEKALNAFE-NPIILIAGGYDK 361
>gi|410644638|ref|ZP_11355114.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Glaciecola
agarilytica NO2]
gi|410135812|dbj|GAC03513.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Glaciecola
agarilytica NO2]
Length = 441
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 142/324 (43%), Gaps = 46/324 (14%)
Query: 11 FQLKATGLACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGI 70
L+ + +++G +V+ +++ A + +LAVTG+NGKSTV T +M G
Sbjct: 73 LSLQTAAIQEAIEAGVQVVGDIELFAMF--NNTPVLAVTGSNGKSTVATLAYEMCMAGGK 130
Query: 71 EAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTP 130
+A +GGN+G P AL + + V+E+SS+Q+E P V+ +LNL+
Sbjct: 131 KALLGGNIGTP---------ALELLEKDADIIVLELSSFQLE-STHTLRPLVACMLNLSD 180
Query: 131 DHLERHKTMKNYALTKCHL-----FSHMVNTKLGLLPFG-NQHLNEAIKGHRFNLAWIGA 184
DHL+RH M +Y K + FS P N + + L+W
Sbjct: 181 DHLDRHGDMLSYQRAKLRIYKDARFSVCNRDDAATWPMTINPDVMFGLSSSERGLSWDKD 240
Query: 185 FPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEA 244
+ +D +A L ++G HN N + A + + + G+++EA
Sbjct: 241 TAQLLLDGKA--------------YLDSQACMLVGEHNMLN--IQAATAMTMLAGIELEA 284
Query: 245 LNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDL----KGHKCVILLG 300
+ S HR Q V V W++DSKATN+ AT + L KG K +++ G
Sbjct: 285 IKSAAMNFAGLAHRCQTVAMS-SNVRWINDSKATNVGATIAAIDGLAPTCKG-KLILIAG 342
Query: 301 GQAKVLNGQESNGFEKLIEPLNHH 324
G K + F L E NH
Sbjct: 343 GDGKGAD------FSPLEERFNHQ 360
>gi|167764158|ref|ZP_02436285.1| hypothetical protein BACSTE_02542 [Bacteroides stercoris ATCC
43183]
gi|167698274|gb|EDS14853.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Bacteroides
stercoris ATCC 43183]
Length = 444
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 146/305 (47%), Gaps = 30/305 (9%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
L + G ++SE++FA + + K++ +TG+NGK+T + + + G+ + GN+GN
Sbjct: 82 LKEKGISIISEIEFAGRYT--NAKMICITGSNGKTTTTSLIYHIFKSAGLNVGLAGNIGN 139
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDHLERHK-T 138
L AL + K V+E+SS+Q++ N Y F ++V++N+TPDHL+R+
Sbjct: 140 SL--------ALQVAMEKHDYYVIELSSFQLD--NMYKFRANIAVLMNITPDHLDRYDHC 189
Query: 139 MKNYALTKCHLFSHMVNTKLGLL----PFGNQHLNE-AIKGHRFNLAWIGAFPGVKIDTE 193
M+ Y K + + + P + L + +K H + A + G E
Sbjct: 190 MQKYVDAKFRITQNQTPEDAFIYWNDDPIIRRELEKHGLKAHPYPFAAVKE-DGAIAYVE 248
Query: 194 AKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILR 253
P + ++ + + G HN +N+ A +S L G+ E + + +
Sbjct: 249 DGEVEINEP---IAFNMEQEELALRGTHNLYNSLAAGISA-NL-AGIRKEDIRKALSDFK 303
Query: 254 TPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNG 313
HR++ V ++GV +++DSKATN+ + L + K V++LGG+ K G +
Sbjct: 304 GVEHRLEKVAT-VRGVQFINDSKATNVNSCWYALQSMTT-KTVLILGGKDK---GNDYTE 358
Query: 314 FEKLI 318
E L+
Sbjct: 359 IEDLV 363
>gi|363889519|ref|ZP_09316879.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Eubacteriaceae
bacterium CM5]
gi|361966586|gb|EHL19485.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Eubacteriaceae
bacterium CM5]
Length = 449
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 135/271 (49%), Gaps = 29/271 (10%)
Query: 59 TFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQME-IPNKY 117
+ +G + +V GN+GN A I+L K F + E+SSYQ+E I N
Sbjct: 120 SMLGDIYKKYDENTYVVGNIGN----AVLSSISLAKPKANF---ITELSSYQLETIVN-- 170
Query: 118 FCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRF 177
F ++V+LN+TPDHL RHKTM+NY K ++ + + + +L ++ ++ ++ +
Sbjct: 171 FRVHIAVILNITPDHLSRHKTMENYKNAKYNITKNQIESDFLVLNKDDESIDINLENVKS 230
Query: 178 NLAWIGAFP----GVKIDTEAKT--ASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAAL 231
+ + GV D E + ++ ++ +H ++G+HN N +A +
Sbjct: 231 KVIYFSMKEKLKNGVYYDREKDSIISTINGKEEEIIKAEDIH---LLGKHNIQN-TLACV 286
Query: 232 SVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLK 291
+V LD + + I+ + HR+Q V R++ GV +V+DSK TN+++T + +
Sbjct: 287 TVSILD-KIPTALIAEAIKDFKAVKHRLQKV-REVDGVIYVNDSKGTNIDSTLKAIESI- 343
Query: 292 GHKCVILLGGQAKVLNGQESNGFEKLIEPLN 322
+ +++ GG K+L F+ LI+ N
Sbjct: 344 DNDIILIAGGYDKMLE------FDDLIKGFN 368
>gi|222153421|ref|YP_002562598.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
uberis 0140J]
gi|254766059|sp|B9DUV7.1|MURD_STRU0 RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|222114234|emb|CAR42820.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
uberis 0140J]
Length = 453
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 149/311 (47%), Gaps = 31/311 (9%)
Query: 22 LQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP 81
L G V++E++ A + I+A+TG+NGK+T T + +LNH G A + GN+G P
Sbjct: 93 LSKGIPVLTEVELAYLI--SEAPIIAITGSNGKTTTTTMIADVLNHGGKSALLSGNIGFP 150
Query: 82 LSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKN 141
SE +A+ +S+ + +E+SS+Q+ + K F P ++++ NL P HL+ H +
Sbjct: 151 ASE-----VAMTASQD--DILTMELSSFQL-MGIKDFHPHIALITNLMPTHLDYHGSFDA 202
Query: 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEV 201
Y K ++ ++M + +L E + + +L + + V+ + F
Sbjct: 203 YIQAKWNIQNNMTADDVLILNAEQDQTKELAQKTQASLVYFSSKEKVEGAYQEDGKLFYK 262
Query: 202 PAVGVVSQLQLHNMKVMGRHNYHNA----AVAALSVLGLDIGVDVEALNSTIEILRTPPH 257
+ +Q ++ V G HN NA AVA LS G+ +A+ T+ H
Sbjct: 263 GEYIMDAQ----SLGVPGLHNVENALATIAVAKLS------GISNQAIAETLSSFGGVKH 312
Query: 258 RMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKL 317
R+Q + I+ V + +DSK+TN+ A L +K +++ GG + N F+ L
Sbjct: 313 RLQKLGT-IKDVAFYNDSKSTNILACQKALSGFDNNKVILIAGGLDR------GNAFDTL 365
Query: 318 IEPLNHHRCVI 328
I + + +I
Sbjct: 366 IPDIKGLKKMI 376
>gi|125717507|ref|YP_001034640.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Streptococcus
sanguinis SK36]
gi|158513223|sp|A3CLN5.1|MURD_STRSV RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|125497424|gb|ABN44090.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase, putative
[Streptococcus sanguinis SK36]
Length = 450
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 136/281 (48%), Gaps = 29/281 (10%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+ +TG+NGK+T T + Q+L G + GN+G P S+ A SSK + V+
Sbjct: 114 IIGITGSNGKTTTTTMIAQVLTAGGQNGLLSGNIGFPASQVAQTA----SSK---DMLVM 166
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFG 164
E+SS+Q+ + + F P ++V+ NL P HL+ H +++ YA K ++ +M +L F
Sbjct: 167 ELSSFQL-MGIEDFHPQIAVITNLMPTHLDYHGSVEEYAAAKWNIQKNMTADDYLVLNFN 225
Query: 165 NQHLNEAIKGHRFNLAWIGAFPGV-KIDT---EAKTASFEVPAVGVVSQLQLHNMKVMGR 220
E + A + F K+D E +F A+ +Q+ + V G
Sbjct: 226 QDWAKEMASQTQ---ATVVPFSTTEKVDGAYLEGDVLTFRGEAI-----MQVAEIGVPGS 277
Query: 221 HNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNL 280
HN N A+A ++V L G+D + + + HR+Q V + + V + +DSK+TN+
Sbjct: 278 HNVEN-ALATIAVAKLR-GIDNQTIKEVLSAFGGVKHRLQYVGQ-VNEVAFYNDSKSTNI 334
Query: 281 EATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPL 321
AT L K +++ GG + N F++L+ L
Sbjct: 335 LATQKALSGFDNSKVILIAGGLDR------GNEFDELVPDL 369
>gi|93007167|ref|YP_581604.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Psychrobacter
cryohalolentis K5]
gi|118595677|sp|Q1Q883.1|MURD_PSYCK RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|92394845|gb|ABE76120.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Psychrobacter
cryohalolentis K5]
Length = 471
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/254 (32%), Positives = 125/254 (49%), Gaps = 38/254 (14%)
Query: 42 SIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQV 101
++ I+A+TG+N KSTV T VGQM GI VGGN+G P ++L S+K + ++
Sbjct: 114 TVPIVAITGSNAKSTVTTLVGQMAADAGINVGVGGNIGVP-------ALSLLSNK-EMEL 165
Query: 102 AVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLF----SHMVNTK 157
AV+E+SS+Q+E V+ VLN++PDHL+RH M Y K +F S ++N +
Sbjct: 166 AVIELSSFQLETVTN-LGAQVATVLNMSPDHLDRHGDMLGYHQAKHRIFQGAKSVVINRE 224
Query: 158 LGL--------LPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAVGVVSQ 209
L LP + ++ KGH G+ DT +T A G
Sbjct: 225 DALTRPLVSDSLPRLSTGIHAPNKGHY----------GLITDTAGQT----YLARGTERL 270
Query: 210 LQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGV 269
+ +K+ GRHN A LG G+ +E + T++ HR Q V + G+
Sbjct: 271 ISADKLKIKGRHNL--LNAQAALALGELAGLPLEIMLITLQQFAGLEHRCQYVST-VAGI 327
Query: 270 TWVDDSKATNLEAT 283
+ +DSK TN+ +T
Sbjct: 328 DYFNDSKGTNIGST 341
>gi|269122825|ref|YP_003305402.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptobacillus
moniliformis DSM 12112]
gi|268314151|gb|ACZ00525.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Streptobacillus
moniliformis DSM 12112]
Length = 457
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 143/300 (47%), Gaps = 40/300 (13%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
+ SE+D A + + + I+I+A TGTNGK+T T +ML G +GGN+G +E
Sbjct: 75 IYSEIDIAYEYMNKDIQIIAFTGTNGKTTTCTKTYEMLKKAGFNVELGGNVGRSFAE--- 131
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
+ + V+E+SSYQ+E N P +S ++NLTPDHL R+K +++Y +TK
Sbjct: 132 ----IVKENKELDYIVLELSSYQLE-NNPKIKPYISGIINLTPDHLGRYKDVEDYYMTKF 186
Query: 148 HLFS------------------HMVNTKLGLLPFGNQ---HLNEAIKGHRFNLAWIGAFP 186
++FS ++ N L + N +++ KG F G
Sbjct: 187 NIFSNQDKKDRMIVNVDDATFLNLYNKAKELENYRNPKRVYISTNNKGSIF--VKNGQIY 244
Query: 187 GVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNA--AVAALSVLGLDIGVDVEA 244
+K +E + F + + + ++ + G HN N +A + GV +
Sbjct: 245 VMKDLSEMYNSKFSLSQ-SADKLIDVKDIALKGEHNLENMLFLIATAKIC----GVPNKV 299
Query: 245 LNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
+ + ++ +++ HRM+ + V +++DSK TN+ +T + + + +++ GG+ K
Sbjct: 300 IRNFLKEVKSIEHRMEDFFKKSNTV-FINDSKGTNVASTKKAIASYE-NDVILICGGEDK 357
>gi|395497067|ref|ZP_10428646.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Pseudomonas
sp. PAMC 25886]
Length = 448
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 142/295 (48%), Gaps = 40/295 (13%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+A++G+N KSTV T VG+M G VGGNLG P AL ++ V+
Sbjct: 111 IVAISGSNAKSTVTTLVGEMAAAAGKRVAVGGNLGTP---------ALDLLNDNVELYVM 161
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSH----MVNTKLGL 160
E+SS+Q+E ++ V+ VLN++ DH++R+ + Y L K +F +VN + L
Sbjct: 162 ELSSFQLETTDQ-LNAEVATVLNVSEDHMDRYSGLPAYHLAKHRIFRGARQVVVNRQDAL 220
Query: 161 LPFGNQHLNEAIKGHRFNL--AWIGAFPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVM 218
+ E + F L AF G++ + K +FE + + + +K+
Sbjct: 221 ---SRPLIGEGLPCWTFGLNKPDFKAF-GLREENGEKYLAFEFQNL-----MPVRELKIR 271
Query: 219 GRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKAT 278
G HN A A LG +G+ +A+ S + HR Q V RD+ GV + +DSKAT
Sbjct: 272 GAHN--QANALAALALGHAVGLPFDAMLSALRSFAGLEHRCQWV-RDLDGVGYYNDSKAT 328
Query: 279 NLEATCTGL----MDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPLNHH-RCVI 328
N+ A + D++G K V++ GG K + F+ L P+ H R V+
Sbjct: 329 NVGAALAAIEGLGADIQG-KVVLIAGGDGKGAD------FKDLKGPVAAHCRAVV 376
>gi|89074172|ref|ZP_01160671.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
[Photobacterium sp. SKA34]
gi|89050108|gb|EAR55634.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
[Photobacterium sp. SKA34]
Length = 446
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 158/333 (47%), Gaps = 46/333 (13%)
Query: 5 WLFLLEFQLKATGLA-------CLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTV 57
WL + + + G+A ++G ++ +++ A+ + + ++A+TG+NGKSTV
Sbjct: 65 WLLSADLIVASPGIALATPELVVAAEAGIEIVGDIELFAREVDK--PVVAITGSNGKSTV 122
Query: 58 VTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY 117
+ VG+M G+ VGGN+G AL + + V+E+SS+Q+E
Sbjct: 123 TSLVGEMAKEAGVNVGVGGNIG---------FAALDMLAQQHALYVLELSSFQLETTTSL 173
Query: 118 FCPTVSVVLNLTPDHLERHK-TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHR 176
T +V LNL+ DH++R+ + Y+ K +F H KL + F L A K +
Sbjct: 174 EL-TAAVYLNLSEDHMDRYPGGLAQYSQAKMRIFDH---AKLAV--FNRDDL--ATKPTQ 225
Query: 177 FNLAWIGAFPGVKIDTEAKTASF----EVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALS 232
F+ GA D + E AV + + + ++ ++GRHN N A
Sbjct: 226 FS----GAMTSFGFDDQDYGIVLVDGKEWLAVNGEAVMAVTDIALVGRHNVANCLAALAL 281
Query: 233 VLGLDIGVDVEALNSTIEILRTPPHRMQI-VHRDIQGVTWVDDSKATNLEATCTGL--MD 289
G+ +A ++ HR Q+ V+R GV WV+DSKATNL +T L +
Sbjct: 282 ADA--AGIPRDAAYRAMQRYTGLAHRCQLAVNR--HGVRWVNDSKATNLASTLAALNGLQ 337
Query: 290 LKGHKCVILLGGQAKVLNGQESNGFEKLIEPLN 322
L+G K +L+GG +K G E + + ++ LN
Sbjct: 338 LEG-KLHLLMGGDSK---GAEFSELKPILADLN 366
>gi|422879377|ref|ZP_16925843.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Streptococcus
sanguinis SK1059]
gi|422929223|ref|ZP_16962165.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Streptococcus
sanguinis ATCC 29667]
gi|422932194|ref|ZP_16965125.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Streptococcus
sanguinis SK340]
gi|332366089|gb|EGJ43845.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Streptococcus
sanguinis SK1059]
gi|339615039|gb|EGQ19722.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Streptococcus
sanguinis ATCC 29667]
gi|339618978|gb|EGQ23568.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Streptococcus
sanguinis SK340]
Length = 459
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 134/281 (47%), Gaps = 29/281 (10%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+ +TG+NGK+T T + Q+L G + GN+G P S+ A S+K V+
Sbjct: 123 IIGITGSNGKTTTTTMIAQVLTAGGQNGLLSGNIGFPASQVAQTA----SNKDTL---VM 175
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFG 164
E+SS+Q+ + + F P ++V+ NL P HL+ H +++ YA K ++ +M +L F
Sbjct: 176 ELSSFQL-MGIEAFHPQIAVITNLMPTHLDYHGSVEGYAAAKWNIQKNMTADDYLVLNFN 234
Query: 165 NQHLNEAIKGHRFNLAWIGAFPGV-KIDT---EAKTASFEVPAVGVVSQLQLHNMKVMGR 220
E + A + F K+D E +F A+ +Q + V G
Sbjct: 235 QDWAKEMASQTQ---ATVVPFSTTEKVDGAYLEGDVLTFRGEAI-----MQAAEIGVPGS 286
Query: 221 HNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNL 280
HN N A+A ++V L G+D + + + HR+Q V R + V + +DSK+TN+
Sbjct: 287 HNVEN-ALATIAVAKLR-GIDNQTIKEVLSAFGGVKHRLQYVGR-VNEVAFYNDSKSTNI 343
Query: 281 EATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPL 321
AT L K +++ GG + N F++L+ L
Sbjct: 344 LATQKALSGFDNSKVILIAGGLDR------GNEFDELVPDL 378
>gi|16078584|ref|NP_389403.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Bacillus
subtilis subsp. subtilis str. 168]
gi|221309394|ref|ZP_03591241.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Bacillus
subtilis subsp. subtilis str. 168]
gi|221313719|ref|ZP_03595524.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Bacillus
subtilis subsp. subtilis str. NCIB 3610]
gi|221318643|ref|ZP_03599937.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Bacillus
subtilis subsp. subtilis str. JH642]
gi|221322916|ref|ZP_03604210.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Bacillus
subtilis subsp. subtilis str. SMY]
gi|402775765|ref|YP_006629709.1| UDP-N-acetylmuramoylalanyl-D-glutamate ligase [Bacillus subtilis
QB928]
gi|418033335|ref|ZP_12671812.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Bacillus
subtilis subsp. subtilis str. SC-8]
gi|428279114|ref|YP_005560849.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Bacillus
subtilis subsp. natto BEST195]
gi|430755998|ref|YP_007209778.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Bacillus subtilis
subsp. subtilis str. BSP1]
gi|452914705|ref|ZP_21963332.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Bacillus subtilis
MB73/2]
gi|417327|sp|Q03522.1|MURD_BACSU RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|580932|emb|CAA78769.1| murD [Bacillus subtilis subsp. subtilis str. 168]
gi|2633891|emb|CAB13393.1| UDP-N-acetylmuramoylalanyl-D-glutamate ligase [Bacillus subtilis
subsp. subtilis str. 168]
gi|291484071|dbj|BAI85146.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Bacillus
subtilis subsp. natto BEST195]
gi|351469483|gb|EHA29659.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Bacillus
subtilis subsp. subtilis str. SC-8]
gi|402480948|gb|AFQ57457.1| UDP-N-acetylmuramoylalanyl-D-glutamate ligase [Bacillus subtilis
QB928]
gi|407958927|dbj|BAM52167.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamatesynthetase [Synechocystis
sp. PCC 6803]
gi|407964504|dbj|BAM57743.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamatesynthetase [Bacillus
subtilis BEST7003]
gi|430020518|gb|AGA21124.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Bacillus subtilis
subsp. subtilis str. BSP1]
gi|452117125|gb|EME07520.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Bacillus subtilis
MB73/2]
Length = 451
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 139/307 (45%), Gaps = 23/307 (7%)
Query: 23 QSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPL 82
+ G V +E++ A + S K + +TG+NGK+T T + +ML +A + GN+G
Sbjct: 95 KRGIPVWTEIELAYYLT--SAKFIGITGSNGKTTTTTLIYEMLKADSQKALIAGNIGTVA 152
Query: 83 SEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNY 142
SE A+H + V E+SS+Q+ + F P +S++LN+ HL+ H T +NY
Sbjct: 153 SEVAYHA-------DGDEWIVTELSSFQL-MGTHAFRPEISLILNVFDAHLDYHHTRENY 204
Query: 143 ALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVP 202
K ++ H + ++ NQ ++ A I F K + +
Sbjct: 205 EKAKQKVYLHQTASDKAIV---NQDDETVVRLAEAGKAEIVPFSVSKTLEQGAYVKDSMI 261
Query: 203 AVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIV 262
+ L L + + G HN N +AA++V+ G EA+ + HR+Q V
Sbjct: 262 MFNGEAILPLEEVVLPGAHNLEN-ILAAIAVVKT-AGASNEAVKKVLTSFTGVKHRLQYV 319
Query: 263 HRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPLN 322
+ G + +DSKATN+ AT L K VILL G NGF+ L +
Sbjct: 320 -TTVNGRKFYNDSKATNILATSKALSAFD--KPVILLAGGL-----DRGNGFDDLKPYMK 371
Query: 323 HHRCVIT 329
H + V+T
Sbjct: 372 HVKAVLT 378
>gi|312143939|ref|YP_003995385.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Halanaerobium
hydrogeniformans]
gi|311904590|gb|ADQ15031.1| UDP-N-acetylmuramoylalanine/D-glutamate ligase [Halanaerobium
hydrogeniformans]
Length = 454
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 133/283 (46%), Gaps = 17/283 (6%)
Query: 25 GKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHL-GIEAFVGGNLGNPLS 83
G +SE++FA ++ I+AVTGTNGK+T + +MLN L G + GN+G P
Sbjct: 93 GIETISEIEFAYRM--NEADIIAVTGTNGKTTTTDLLAKMLNKLNGRKVQAAGNIGIPF- 149
Query: 84 EAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYA 143
I++ K + V+E+SS+Q+E K F P +++ LN +PDHL+RHK+ +NY
Sbjct: 150 ------ISIVEQMGKDDLVVLELSSFQLEAV-KNFHPKIALYLNYSPDHLDRHKSEENYK 202
Query: 144 LTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAF-PGVKIDTEAKTASFEVP 202
K +FS + L+ +++L E + L I AF + E A +
Sbjct: 203 NAKKKIFSQQNRSDYALIDLDDKYLAEIKNQIKAELFTISAFNKKADVIIENNKAILQKN 262
Query: 203 AVGVVSQL-QLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQI 261
+L + HN N AAL+ G +E + + HRM+
Sbjct: 263 GEDKKQELIDFDKLNFSALHNKKNITFAALAAYL--SGQKLEKIKHAAQKYELKSHRMEK 320
Query: 262 VHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
+ D +G +DDSKATN A + L +++ GGQ +
Sbjct: 321 IDND-RGYLIIDDSKATNPSAALNAVKSL-DRDIILIAGGQDR 361
>gi|419653293|ref|ZP_14184271.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Campylobacter
jejuni subsp. jejuni 2008-872]
gi|419665446|ref|ZP_14195515.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Campylobacter
jejuni subsp. jejuni 1997-7]
gi|419681311|ref|ZP_14210150.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Campylobacter
jejuni subsp. jejuni 140-16]
gi|419686189|ref|ZP_14214626.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Campylobacter
jejuni subsp. jejuni 1798]
gi|380632814|gb|EIB50864.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Campylobacter
jejuni subsp. jejuni 2008-872]
gi|380643550|gb|EIB60773.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Campylobacter
jejuni subsp. jejuni 1997-7]
gi|380658394|gb|EIB74412.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Campylobacter
jejuni subsp. jejuni 140-16]
gi|380664968|gb|EIB80551.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Campylobacter
jejuni subsp. jejuni 1798]
Length = 402
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 131/286 (45%), Gaps = 47/286 (16%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
L+Q K + SE DF V+P+S+ I +GTNGK+T +L+H+G A +GGN+G
Sbjct: 71 LIQEAKNLQSEYDFFYDVMPKSVWI---SGTNGKTTTTQMATHLLSHIG--AVMGGNVGT 125
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMK 140
PL+E P ++ ++E SS+ + +K P + +L ++PDHL H +
Sbjct: 126 PLAEL----------NPYEKLWILETSSFTLHYTHKA-KPEIYALLPISPDHLSWHGSFD 174
Query: 141 NYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFE 200
NY K + M + +LP + N K H+ + VK + + SF+
Sbjct: 175 NYVQDKLSVLKRMNECDVTILP--KIYANTPTKAHKISYEDEKDL-AVKFGIDTEKISFK 231
Query: 201 VPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSV--LGLDIGVDVEALNSTIEILRTPPHR 258
P + A+ AL++ + LD + E LNS + ++
Sbjct: 232 SP--------------------FLLDAIMALAIEKILLDT-LSYEPLNSFV----MEKNK 266
Query: 259 MQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
++ + +D Q WV+D+KATN A L K K +++GG K
Sbjct: 267 LEEI-KDSQNRLWVNDTKATNESAVMAALSRYKDKKIHLIIGGDDK 311
>gi|42046|emb|CAA35611.1| unnamed protein product [Escherichia coli K-12]
Length = 438
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 138/301 (45%), Gaps = 69/301 (22%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+A+TG+NGKSTV T VG+M G+ VGGN+G P AL + ++ V+
Sbjct: 107 IVAITGSNGKSTVTTLVGEMAKAAGVNVGVGGNIGLP---------ALMLLDDECELYVL 157
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHK-TMKNYALTKCHLFSH----MVNTKLG 159
E+SS+Q+E + T + +LN+T DH++R+ ++ Y K ++ + +VN
Sbjct: 158 ELSSFQLETTSSLQAVTAT-ILNVTEDHMDRYPFGLQQYRAAKLRIYENAKVCVVNADDA 216
Query: 160 L-LP--------------FGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVPAV 204
L +P G+ HLN H+ W+ G K+
Sbjct: 217 LTMPIRGADERCVSFGVNMGDYHLN-----HQQGETWL-RVKGEKV-------------- 256
Query: 205 GVVSQLQLHNMKVMGRHNYHN--AAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIV 262
L + MK+ G+HNY N A VA GL ++AL + + PHR ++V
Sbjct: 257 -----LNVKEMKLSGQHNYTNALARVALADAAGLPRASSLKALTTFTGL----PHRFEVV 307
Query: 263 HRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCV-ILLGGQAKVLNGQESNGFEKLIEPL 321
+ GV W++DSKATN+ +T L L + +LLGG K S F L L
Sbjct: 308 -LEHNGVRWINDSKATNVGSTEAALNGLHVDGTLHLLLGGDGK------SADFSPLARYL 360
Query: 322 N 322
N
Sbjct: 361 N 361
>gi|334140299|ref|YP_004533501.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Novosphingobium
sp. PP1Y]
gi|333938325|emb|CCA91683.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Novosphingobium
sp. PP1Y]
Length = 444
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 123/261 (47%), Gaps = 33/261 (12%)
Query: 23 QSGKRVMSELDFAAQVIPR--SIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
++G V+ +++ A P + +++ +TGTNGKST + V +L G+ A +GGN+G
Sbjct: 87 RAGVPVIGDIELFALARPSLPAHRVVGITGTNGKSTTTSLVHHLLEKAGVPARMGGNIGV 146
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMK 140
P I P+ V V+E+SSYQ+++ C V+ +LN+TPDHL+R+
Sbjct: 147 P--------ILGTDPLPEGGVYVLELSSYQIDLTRSLDC-DVAALLNITPDHLDRYDGFA 197
Query: 141 NYALTKCHLFSHMVNTKLGLLPFGNQHLN--EAIKGHRFNLAWIGAFPGVKIDTEAKTAS 198
YA +K LF+ + G+ + + +R L + G K+ T
Sbjct: 198 AYAASKARLFTMQGAEHDAVFGSGDAETAAIASTEANRRGLDHVRIVDGAKLTT------ 251
Query: 199 FEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHR 258
LQ + G HN NAAVA V L G+ E + R PHR
Sbjct: 252 -----------LQKKWPSLQGPHNLQNAAVAVAIVEAL--GIKPEQWKRAMRNFRGLPHR 298
Query: 259 MQIVHRDIQGVTWVDDSKATN 279
M+ V + GV +++DSKATN
Sbjct: 299 MERVA-EADGVFYINDSKATN 318
>gi|34499800|ref|NP_904015.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
[Chromobacterium violaceum ATCC 12472]
gi|62900566|sp|Q7NPZ7.1|MURD_CHRVO RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
AltName: Full=D-glutamic acid-adding enzyme; AltName:
Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase
gi|34105650|gb|AAQ62004.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Chromobacterium
violaceum ATCC 12472]
Length = 453
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 145/300 (48%), Gaps = 39/300 (13%)
Query: 18 LACLLQSGKRVMSELDFAAQVIP-RSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGG 76
+A ++G V+ +++ A+ I K++A+TG+NGKSTV + VG + G++ V G
Sbjct: 84 IAAFRRAGGEVVGDIEILARAIQGDGSKVIAITGSNGKSTVTSLVGHLCEAAGLDTVVAG 143
Query: 77 NLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERH 136
N+G + EA +A S + V V+E+SS+Q+E + VLN++ DHL+R+
Sbjct: 144 NIGLAVLEA---LLAREQSGKRPDVWVLELSSFQLE-STFSLAADAATVLNISEDHLDRY 199
Query: 137 KTMKNYALTKCHLFS----HMVNTKLGLL--------PFGNQHLNEAIKGHRFNLAWIGA 184
+ +YA K +F+ ++N L+ P LN A + LA G
Sbjct: 200 ADLLDYAHAKTRVFNGKGVQVLNKDDALVRAMVRPGHPVKWFSLNGAAD---YALARNGG 256
Query: 185 FPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEA 244
+ +K+D E +M++ G HN NA A G IG+ +E
Sbjct: 257 Y-WLKVDGE--------------KVFDCADMQLQGLHNAANALAALGLCQG--IGLPLEK 299
Query: 245 LNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
L ++ R HR+++V + G+ ++DDSK TN+ AT L + + V++ GG K
Sbjct: 300 LLDGLKTFRGLAHRVELVD-EFDGIAFIDDSKGTNVGATEAALNGMT-RQVVLIAGGDGK 357
>gi|384082071|ref|ZP_09993246.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [gamma
proteobacterium HIMB30]
Length = 446
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 140/300 (46%), Gaps = 45/300 (15%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
L Q+ ++S++ + P + ++A+TG+N KSTV + V ++L G VGGNLG
Sbjct: 85 LEQTSAHLISDIQVFRRAWPENQPLIAITGSNAKSTVTSLVAEILKADGRHVLVGGNLGP 144
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMK 140
+ L + + +AV+E+SS+Q+E + TV+ LN++PDHL+ H +M
Sbjct: 145 -------QALDLLAERTNESIAVLELSSFQLE-RTRRLKATVATCLNMSPDHLDWHGSMI 196
Query: 141 NYALTKCHLFS---------------HMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAF 185
Y K +F +V + + F QH + H+F + +
Sbjct: 197 AYHQAKHRIFEGVGAIVVNSDDPLSQPLVPDQTPTIKFALQHPD----FHQFGVMVVDGK 252
Query: 186 PGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEAL 245
+ + E A E+P + GR+ N A+AA + L +GVD
Sbjct: 253 EWISLGAEPWMAVSELP--------------MSGRYMIQN-AMAAFGICHL-VGVDKAIA 296
Query: 246 NSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILL-GGQAK 304
+ + PHRM + ++GV +++DSK TN+ A+ T + ++ V LL GG++K
Sbjct: 297 VAAMLEYAGLPHRM-VERAPVKGVRFINDSKGTNVGASATAVSSVEADGHVYLLAGGESK 355
>gi|357037242|ref|ZP_09099042.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Desulfotomaculum
gibsoniae DSM 7213]
gi|355361407|gb|EHG09162.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Desulfotomaculum
gibsoniae DSM 7213]
Length = 450
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 102/321 (31%), Positives = 153/321 (47%), Gaps = 40/321 (12%)
Query: 23 QSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPL 82
Q G V+ EL+ A + S ++A+TGTNGK+T T VG++ G+ VGGN+G PL
Sbjct: 90 QYGIPVLGELELAYRFA--SAPMVAITGTNGKTTTTTLVGEIFRMAGLRTLVGGNIGLPL 147
Query: 83 SEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNY 142
+ + PK + + EVSS+Q+E N +F P V+VVLN+TPDHL+RH +M+ Y
Sbjct: 148 VD------VVEDYGPK-DIIIAEVSSFQLETAN-HFKPRVAVVLNITPDHLDRHGSMEGY 199
Query: 143 ALTKCHLFSHMVNTKLGLLPF---GNQHLNEAIKG------HRFNLAWIGAFPGVKIDTE 193
K +F+ +L + G + L A G + NL G I
Sbjct: 200 IEAKARIFARQGPEDFTVLNYDDPGTRALAGATSGKVIFFSRKHNLEEGVLVRGDMIAVR 259
Query: 194 AKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILR 253
K ++ + + + G HN NA A + +GV E L ILR
Sbjct: 260 HKGIDTDI--------IPPREVAIPGVHNLENALAAVAAA--FALGVRPEVL---ARILR 306
Query: 254 TPP---HRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQE 310
+ P HR++ V + GV +V+DSK TN +A+ L V+L GG+ K G +
Sbjct: 307 SFPGVAHRLETVAQK-DGVLFVNDSKGTNPDASIKALKAFD-RPIVLLAGGRNK---GSD 361
Query: 311 SNGFEKLIEPLNHHRCVITEC 331
+ F +LI+ V+ EC
Sbjct: 362 FSEFARLIKQKVRVLVVLGEC 382
>gi|406709008|ref|YP_006763734.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Streptococcus
agalactiae GD201008-001]
gi|410594154|ref|YP_006950881.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
agalactiae SA20-06]
gi|406649893|gb|AFS45294.1| UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase [Streptococcus
agalactiae GD201008-001]
gi|410517793|gb|AFV71937.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Streptococcus
agalactiae SA20-06]
Length = 455
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 156/310 (50%), Gaps = 33/310 (10%)
Query: 28 VMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAF 87
V++E++ A V +++ +TG+NGK+T T + ++LN G + GN+G P SE
Sbjct: 103 VLTEVELAYLV--SESQLIGITGSNGKTTTTTMIAEVLNAGGQRGLLAGNIGFPASE--- 157
Query: 88 HCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKC 147
+ + K V+E+SS+Q+ + K F P ++V+ NL P HL+ H + ++Y K
Sbjct: 158 -VVQAANDKDTL---VMELSSFQL-MGVKEFRPHIAVITNLMPTHLDYHGSFEDYVAAKW 212
Query: 148 HLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGV-KID---TEAKTASFEVPA 203
++ + M ++ +L F NQ +++ + + A I F K+D + K ++
Sbjct: 213 NIQNQMSSSDFLVLNF-NQGISKELA--KTTKATIVPFSTTEKVDGAYVQDKQLFYKGEN 269
Query: 204 VGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVH 263
+ + + ++ V G HN N A+A ++V L G+ + + T+ HR+Q +
Sbjct: 270 I-----MSVDDIGVPGSHNVEN-ALATIAVAKL-AGISNQVIRETLSNFGGVKHRLQSLG 322
Query: 264 RDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPLN- 322
+ + G+++ +DSK+TN+ AT L K +++ GG + N F++LI +
Sbjct: 323 K-VHGISFYNDSKSTNILATQKALSGFDNTKVILIAGGLDR------GNEFDELIPDITG 375
Query: 323 -HHRCVITEC 331
H V+ E
Sbjct: 376 LKHMVVLGES 385
>gi|449094214|ref|YP_007426705.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Bacillus
subtilis XF-1]
gi|449028129|gb|AGE63368.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Bacillus
subtilis XF-1]
Length = 451
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 139/307 (45%), Gaps = 23/307 (7%)
Query: 23 QSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPL 82
+ G V +E++ A + S K + +TG+NGK+T T + +ML +A + GN+G
Sbjct: 95 KRGIPVWTEIELAYYLT--SAKFIGITGSNGKTTTTTLIYEMLKADSQKALIAGNIGTVA 152
Query: 83 SEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNY 142
SE A+H + V E+SS+Q+ + F P +S++LN+ HL+ H T +NY
Sbjct: 153 SEVAYHA-------DGDEWIVTELSSFQL-MGTHAFRPEISLILNVFDAHLDYHHTRENY 204
Query: 143 ALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVP 202
K ++ H + ++ NQ ++ A I F K + +
Sbjct: 205 EKAKQKVYLHQTASDKAIV---NQDDETVVRLAEAGKAEIVPFSVSKTLEQGAYVKDSMI 261
Query: 203 AVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIV 262
+ L L + + G HN N +AA++V+ G EA+ + HR+Q V
Sbjct: 262 MFNGEAILPLEEVVLPGAHNLEN-ILAAIAVVKT-AGASNEAVKKVLTSFTGVKHRLQYV 319
Query: 263 HRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPLN 322
+ G + +DSKATN+ AT L K VILL G NGF+ L +
Sbjct: 320 -TTVNGRKFYNDSKATNILATSKALSAFD--KPVILLAGGL-----DRGNGFDDLKPYMK 371
Query: 323 HHRCVIT 329
H + V+T
Sbjct: 372 HVKAVLT 378
>gi|410642379|ref|ZP_11352891.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Glaciecola
chathamensis S18K6]
gi|410138051|dbj|GAC11078.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Glaciecola
chathamensis S18K6]
Length = 441
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 142/324 (43%), Gaps = 46/324 (14%)
Query: 11 FQLKATGLACLLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGI 70
L+ + +++G +V+ +++ A + +LAVTG+NGKSTV T +M G
Sbjct: 73 LSLQTAAIQEAIEAGVQVVGDIELFAMF--NNTPVLAVTGSNGKSTVATLAYEMCIAGGK 130
Query: 71 EAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTP 130
+A +GGN+G P AL + + V+E+SS+Q+E P V+ +LNL+
Sbjct: 131 KALLGGNIGTP---------ALELLEKDADIIVLELSSFQLE-STHTLRPLVACMLNLSD 180
Query: 131 DHLERHKTMKNYALTKCHL-----FSHMVNTKLGLLPFG-NQHLNEAIKGHRFNLAWIGA 184
DHL+RH M +Y K + FS P N + + L+W
Sbjct: 181 DHLDRHGDMLSYQRAKLRIYKDARFSVCNRDDAATWPMTINPDVMFGLSSSERGLSWDKD 240
Query: 185 FPGVKIDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEA 244
+ +D +A L ++G HN N + A + + + G+++EA
Sbjct: 241 TAQLLLDGKA--------------YLDSQACMLVGEHNMLN--IQAATAMTMLAGIELEA 284
Query: 245 LNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDL----KGHKCVILLG 300
+ S HR Q V V W++DSKATN+ AT + L KG K +++ G
Sbjct: 285 IKSAAMNFAGLAHRCQTVAMS-SNVRWINDSKATNVGATIAAIDGLAPTCKG-KLILIAG 342
Query: 301 GQAKVLNGQESNGFEKLIEPLNHH 324
G K + F L E NH
Sbjct: 343 GDGKGAD------FSPLEERFNHQ 360
>gi|397685941|ref|YP_006523260.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Pseudomonas
stutzeri DSM 10701]
gi|395807497|gb|AFN76902.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Pseudomonas
stutzeri DSM 10701]
Length = 447
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 132/290 (45%), Gaps = 39/290 (13%)
Query: 45 ILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVV 104
I+A+TG+N KSTV T VG+M G + VGGNLG P AL ++ V+
Sbjct: 110 IIAITGSNAKSTVTTLVGEMAQAAGRKVAVGGNLGTP---------ALDLLNDDVELYVL 160
Query: 105 EVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFG 164
E+SS+Q+E + V+ LN++ DH++R+ + Y K +F +
Sbjct: 161 ELSSFQLET-TEQLNAEVATCLNVSEDHMDRYAGLPAYHQAKHRIFRGARQVVVNR---- 215
Query: 165 NQHLNEAIKGHRFNLAWIG----AFPGVKIDTE--AKTASFEVPAVGVVSQLQLHNMKVM 218
+ L+ + G + G F G + E K +F+ A+ + +K+
Sbjct: 216 DDRLSRPLVGEEVPVWSFGLGKPDFKGFGLIEENGEKHLAFQFEAL-----MPARELKMR 270
Query: 219 GRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKAT 278
G HN NA A LG +G+ A+ T+ PHR Q V + GV++ DDSKAT
Sbjct: 271 GAHNQSNALAA--LALGHAVGLPFAAMLQTLRTFAGLPHRCQWVG-ERAGVSYYDDSKAT 327
Query: 279 NLEATCTGL----MDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPLNHH 324
N+ A + D+ G K V++ GG K + F L EP+ H
Sbjct: 328 NVGAALAAIGGLGADIDG-KLVLIAGGDGKGAD------FSALREPIGRH 370
>gi|321315285|ref|YP_004207572.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Bacillus
subtilis BSn5]
gi|320021559|gb|ADV96545.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Bacillus
subtilis BSn5]
Length = 451
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 139/307 (45%), Gaps = 23/307 (7%)
Query: 23 QSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPL 82
+ G V +E++ A + S K + +TG+NGK+T T + +ML +A + GN+G
Sbjct: 95 KRGIPVWTEIELAYYLT--SAKFIGITGSNGKTTTTTLIYEMLKAGSQKALIAGNIGTVA 152
Query: 83 SEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMKNY 142
SE A+H + V E+SS+Q+ + F P +S++LN+ HL+ H T +NY
Sbjct: 153 SEVAYHA-------DGDEWIVTELSSFQL-MGTHAFRPEISLILNVFDAHLDYHHTRENY 204
Query: 143 ALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFEVP 202
K ++ H + ++ NQ ++ A I F K + +
Sbjct: 205 EKAKQKVYLHQTASDKAIV---NQDDETVVRLAEAGKAEIVPFSVSKTLEQGAYVKDSMI 261
Query: 203 AVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRTPPHRMQIV 262
+ L L + + G HN N +AA++V+ G EA+ + HR+Q V
Sbjct: 262 MFNGEAILPLEEVVLPGAHNLEN-ILAAIAVVKT-AGASNEAVKKVLTSFTGVKHRLQYV 319
Query: 263 HRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQESNGFEKLIEPLN 322
+ G + +DSKATN+ AT L K VILL G NGF+ L +
Sbjct: 320 -TTVNGRKFYNDSKATNILATSKALSAFD--KPVILLAGGL-----DRGNGFDDLKPYMK 371
Query: 323 HHRCVIT 329
H + V+T
Sbjct: 372 HVKAVLT 378
>gi|205355314|ref|ZP_03222085.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Campylobacter
jejuni subsp. jejuni CG8421]
gi|419620832|ref|ZP_14154241.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Campylobacter
jejuni subsp. jejuni 51494]
gi|419626294|ref|ZP_14159288.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Campylobacter
jejuni subsp. jejuni LMG 23223]
gi|419632753|ref|ZP_14165206.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Campylobacter
jejuni subsp. jejuni LMG 23269]
gi|419646034|ref|ZP_14177512.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Campylobacter
jejuni subsp. jejuni 53161]
gi|419671225|ref|ZP_14200898.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Campylobacter
jejuni subsp. jejuni 1997-14]
gi|419673221|ref|ZP_14202696.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Campylobacter
jejuni subsp. jejuni 51037]
gi|419678457|ref|ZP_14207508.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Campylobacter
jejuni subsp. jejuni 87459]
gi|419695153|ref|ZP_14223051.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Campylobacter
jejuni subsp. jejuni LMG 23210]
gi|205346548|gb|EDZ33180.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Campylobacter
jejuni subsp. jejuni CG8421]
gi|380598379|gb|EIB18791.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Campylobacter
jejuni subsp. jejuni 51494]
gi|380603580|gb|EIB23671.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Campylobacter
jejuni subsp. jejuni LMG 23223]
gi|380613658|gb|EIB33128.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Campylobacter
jejuni subsp. jejuni LMG 23269]
gi|380624443|gb|EIB43095.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Campylobacter
jejuni subsp. jejuni 53161]
gi|380649739|gb|EIB66427.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Campylobacter
jejuni subsp. jejuni 1997-14]
gi|380654113|gb|EIB70489.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Campylobacter
jejuni subsp. jejuni 51037]
gi|380660558|gb|EIB76501.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Campylobacter
jejuni subsp. jejuni 87459]
gi|380679543|gb|EIB94385.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Campylobacter
jejuni subsp. jejuni LMG 23210]
Length = 402
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 131/286 (45%), Gaps = 47/286 (16%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
L+Q K + SE DF V+P+S+ I +GTNGK+T +L+H+G A +GGN+G
Sbjct: 71 LIQEAKNLQSEYDFFYDVMPKSVWI---SGTNGKTTTTQMATHLLSHIG--AVMGGNVGT 125
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERHKTMK 140
PL+E P ++ ++E SS+ + +K P + +L ++PDHL H +
Sbjct: 126 PLAEL----------NPYEKLWILETSSFTLHYTHKA-KPEIYALLPISPDHLSWHGSFD 174
Query: 141 NYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKIDTEAKTASFE 200
NY K + M + +LP + N K H+ + VK + + SF+
Sbjct: 175 NYVQDKLSVLKRMNECDVTILP--KIYANTPTKAHKISYEDEKDL-AVKFGIDTEKISFK 231
Query: 201 VPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSV--LGLDIGVDVEALNSTIEILRTPPHR 258
P + A+ AL++ + LD + E LNS + ++
Sbjct: 232 SP--------------------FLLDAIMALAIEKILLDT-LSYEPLNSFV----MEKNK 266
Query: 259 MQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAK 304
++ + +D Q WV+D+KATN A L K K +++GG K
Sbjct: 267 LEEI-KDSQNRLWVNDTKATNESAVMAALSRYKDKKIHLIIGGDDK 311
>gi|402839214|ref|ZP_10887707.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Eubacteriaceae
bacterium OBRC8]
gi|402270753|gb|EJU20011.1| UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Eubacteriaceae
bacterium OBRC8]
Length = 449
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 137/271 (50%), Gaps = 29/271 (10%)
Query: 59 TFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQME-IPNKY 117
+ +G + +V GN+GN A I+L +K F + E+SSYQ+E I N
Sbjct: 120 SMLGDIYKKYDENTYVVGNIGN----AVLSSISLAKTKANF---ITELSSYQLETIVN-- 170
Query: 118 FCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRF 177
F ++V+LN+TPDHL RHKTM+NY K ++ + + +L ++ ++ ++ +
Sbjct: 171 FRVHIAVILNITPDHLSRHKTMENYKNAKYNITKNQIEGDFLVLNKDDESIDINLENVKS 230
Query: 178 NLAWIGAFP----GVKIDTEAKTASFEVPAVGVVSQ--LQLHNMKVMGRHNYHNAAVAAL 231
+ + GV DTE + + + + +++ ++ ++G+HN N +A +
Sbjct: 231 KVIYFSMKEKLKNGVYYDTEKGSI---ISTINRKEEEIIKVKDIHLLGKHNIQN-TLACV 286
Query: 232 SVLGLDIGVDVEALNSTIEILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLK 291
+V LD + + I+ + HR+Q V R++ V +V+DSK TN+++T + +
Sbjct: 287 TVSILD-NIPTALIAEAIKDFKAVKHRLQKV-REVDDVIYVNDSKGTNIDSTLKAIESI- 343
Query: 292 GHKCVILLGGQAKVLNGQESNGFEKLIEPLN 322
+ +++ GG K+L F+ LI+ N
Sbjct: 344 DNDIILIAGGYDKMLE------FDDLIKGFN 368
>gi|380693288|ref|ZP_09858147.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Bacteroides faecis
MAJ27]
Length = 444
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 147/308 (47%), Gaps = 36/308 (11%)
Query: 21 LLQSGKRVMSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGN 80
L G ++SE++F + K++ +TG+NGK+T + + + + + GN+G
Sbjct: 82 LKAQGTPIISEIEFTGRYT--DAKMICITGSNGKTTTTSLIYHIFKSADLNVGLAGNIGK 139
Query: 81 PLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEIPNKY-FCPTVSVVLNLTPDHLERHK-T 138
L AL ++ ++E+SS+Q++ N Y F ++V++N+TPDHL+R+
Sbjct: 140 SL--------ALQVAEEHHDYYIIELSSFQLD--NMYNFRANIAVLMNITPDHLDRYDHC 189
Query: 139 MKNYALTKCHLFSHMVNTKLGLL----PFGNQHL-NEAIKGHRFNLAWI---GAFPGVKI 190
M+NY K + + + P Q L +K H + A + GA V+
Sbjct: 190 MQNYIDAKFRITQNQTTDDAFIFWNDDPIIKQELAKHGLKAHLYPFAAMKEDGAIAYVE- 248
Query: 191 DTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIE 250
D E K + ++ + + G+HN +N+ A +S L G+ E + +
Sbjct: 249 DHEVKITE------PIAFNMEQEELALTGQHNLYNSLAAGISA-NL-AGITKENIRKALS 300
Query: 251 ILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQAKVLNGQE 310
+ HR++ V R ++G+ +++DSKATN+ + L + K V++LGG+ K G +
Sbjct: 301 DFKGVEHRLEKVAR-VRGIDFINDSKATNVNSCWYALQSMTT-KTVLILGGKDK---GND 355
Query: 311 SNGFEKLI 318
E L+
Sbjct: 356 YTEIEDLV 363
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.136 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,092,049,120
Number of Sequences: 23463169
Number of extensions: 198953172
Number of successful extensions: 491417
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3231
Number of HSP's successfully gapped in prelim test: 8574
Number of HSP's that attempted gapping in prelim test: 472502
Number of HSP's gapped (non-prelim): 14168
length of query: 331
length of database: 8,064,228,071
effective HSP length: 143
effective length of query: 188
effective length of database: 9,003,962,200
effective search space: 1692744893600
effective search space used: 1692744893600
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 77 (34.3 bits)