Your job contains 1 sequence.
>020060
MEKVEEDIWARATKAADDLYHVKETFFPANPDDKVSKLQNESDLALRLLGSVPPEQRKSP
TQRATYEYLKGKILDVVPEYRKDAEDHLSKAVKLNPSLADAWLCLGSCIWKKGDLPAAKN
CFNLALSKGPNKKILCQLSMLERSMAQGSENQAEIVEESIQHAKEAITLDVKDGNSWYNL
GNACLTSFFVTGSWDHSKLLQSLKAYQNAEKDERMKSNPDLYFNCATVNKYLENYERALS
GFEASALKDPSLNATEEVQMMVNLLDKIENLLKGHAKTKRVASLASSLAVVKLSSSHKRA
TVDLLSEGLNKAVAVVGKVLFFVKHENVTPL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 020060
(331 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q0P5H9 - symbol:TTC5 "Tetratricopeptide repeat ... 442 1.2e-45 2
RGD|1311284 - symbol:Ttc5 "tetratricopeptide repeat domai... 445 2.0e-45 2
MGI|MGI:2683584 - symbol:Ttc5 "tetratricopeptide repeat d... 429 9.6e-44 2
ZFIN|ZDB-GENE-050417-137 - symbol:ttc5 "tetratricopeptide... 456 3.5e-43 1
UNIPROTKB|Q8N0Z6 - symbol:TTC5 "Tetratricopeptide repeat ... 445 5.2e-42 1
UNIPROTKB|F1S8F7 - symbol:TTC5 "Uncharacterized protein" ... 436 4.6e-41 1
UNIPROTKB|G4NAC6 - symbol:MGG_03196 "RCM-1" species:24250... 118 0.00082 1
>UNIPROTKB|Q0P5H9 [details] [associations]
symbol:TTC5 "Tetratricopeptide repeat protein 5"
species:9913 "Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 PROSITE:PS50005 PROSITE:PS50293 GO:GO:0005634
GO:GO:0005737 GO:GO:0006281 Gene3D:1.25.40.10 InterPro:IPR013105
Pfam:PF07719 EMBL:BC120007 IPI:IPI00708578 RefSeq:NP_001068932.1
UniGene:Bt.3106 ProteinModelPortal:Q0P5H9 PRIDE:Q0P5H9
Ensembl:ENSBTAT00000036235 GeneID:510757 KEGG:bta:510757 CTD:91875
eggNOG:NOG83672 GeneTree:ENSGT00390000006227 HOGENOM:HOG000006922
HOVERGEN:HBG054388 InParanoid:Q0P5H9 OMA:GKDYSFS OrthoDB:EOG4TTGHW
NextBio:20869601 Uniprot:Q0P5H9
Length = 440
Score = 442 (160.7 bits), Expect = 1.2e-45, Sum P(2) = 1.2e-45
Identities = 113/286 (39%), Positives = 160/286 (55%)
Query: 2 EKVEEDIWARATKAADDLYHVKETFFPANP-DDKVSKLQNESDLALRLLGSVPPEQRKSP 60
E+V+E + + + D LY +E +F + DD K Q+ + + L + E S
Sbjct: 7 EEVKE-VLQKLQELVDQLYSFRECYFETHSVDDAGRKQQDVREEMEKTLQQME-EVVGSV 64
Query: 61 TQRATYEYLKGKILDVVPEYRKDAEDHLSKAVKLNPSLADAWLCLGSCIWKKGDLPAAKN 120
A L GK L+V P+Y AE+ LSKAVKL P L +AW LG WKKGD+ AA
Sbjct: 65 QGNAQVLMLTGKALNVTPDYSPKAEELLSKAVKLEPKLVEAWNQLGEVYWKKGDVAAAHT 124
Query: 121 CFNLALSKGPNKKILCQLSMLERSMAQGS-ENQAEIVEESIQHAKEAITLDVKDGNSWYN 179
CF+ AL+ NK L LSM+ R + S + + V +S++ AK A+ +D+ DG SWY
Sbjct: 125 CFSGALTHCKNKVSLQNLSMVLRQLRTDSGDEHSRHVMDSVRQAKLAVQMDILDGRSWYI 184
Query: 180 LGNACLTSFFVTGSWDHSKLLQ-SLKAYQNAEK-DERMKSNPDLYFNCATVNKYLENYER 237
LGNA L+ +F TG + K+ Q +L AY AEK D SNPDL+ N AT++KY ENY
Sbjct: 185 LGNAYLSLYFNTGQ--NPKISQQALSAYAQAEKVDRTASSNPDLHLNRATLHKYEENYGE 242
Query: 238 ALSGFEASALKDPSL-NATEEVQMMVNLLDKIENLL--KGHAKTKR 280
AL GF +A DP+ + Q +++ L ++ + L KG KTK+
Sbjct: 243 ALEGFSRAAALDPAWPEPWQREQQLLDFLTRLTSFLESKGKVKTKK 288
Score = 54 (24.1 bits), Expect = 1.2e-45, Sum P(2) = 1.2e-45
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 298 KRATVDLLSEGLNKAVAVVGKVLFFVKHENVTP 330
+R ++ L G+N V+GKV+F + E P
Sbjct: 320 ERKPLNALQPGVNSGAVVLGKVVFSLTTEEKVP 352
>RGD|1311284 [details] [associations]
symbol:Ttc5 "tetratricopeptide repeat domain 5" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA;ISO]
[GO:0003682 "chromatin binding" evidence=IEA;ISO] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 PROSITE:PS50005
PROSITE:PS50293 RGD:1311284 GO:GO:0005634 GO:GO:0005737
GO:GO:0006281 Gene3D:1.25.40.10 InterPro:IPR013105 Pfam:PF07719
CTD:91875 eggNOG:NOG83672 GeneTree:ENSGT00390000006227
HOGENOM:HOG000006922 HOVERGEN:HBG054388 OMA:GKDYSFS
OrthoDB:EOG4TTGHW EMBL:BC091207 IPI:IPI00201829
RefSeq:NP_001013149.1 UniGene:Rn.16620 ProteinModelPortal:Q5BK48
PRIDE:Q5BK48 Ensembl:ENSRNOT00000011741 GeneID:305837
KEGG:rno:305837 UCSC:RGD:1311284 InParanoid:Q5BK48 NextBio:655080
Genevestigator:Q5BK48 GermOnline:ENSRNOG00000008850 Uniprot:Q5BK48
Length = 440
Score = 445 (161.7 bits), Expect = 2.0e-45, Sum P(2) = 2.0e-45
Identities = 115/290 (39%), Positives = 163/290 (56%)
Query: 2 EKVEEDIWARATKAADDLYHVKETFFPANP-DD---KVSKLQNESDLALR----LLGSVP 53
E+ + + + + D LY ++++F + +D K +Q E + LR +LGSV
Sbjct: 6 EEEAKQVLQKLQELVDQLYCFRDSYFETHSVEDAGQKQQDVQEEMEKTLRQMEEVLGSVQ 65
Query: 54 PEQRKSPTQRATYEYLKGKILDVVPEYRKDAEDHLSKAVKLNPSLADAWLCLGSCIWKKG 113
E A LKGK L+V P+Y +AE LSKAVKL P L +AW LG WKKG
Sbjct: 66 VE--------AQALMLKGKALNVTPDYSPEAEVLLSKAVKLEPELVEAWNQLGEVYWKKG 117
Query: 114 DLPAAKNCFNLALSKGPNKKILCQLSMLERSMAQGS-ENQAEIVEESIQHAKEAITLDVK 172
D+ AA CF+ AL+ NK L LSM+ R + S + + V +S++ AK A+ +DV
Sbjct: 118 DVAAAHTCFSGALTHCKNKVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVL 177
Query: 173 DGNSWYNLGNACLTSFFVTGSWDHSKLLQ-SLKAYQNAEK-DERMKSNPDLYFNCATVNK 230
DG SWY LGNA L+ +F TG + K+ Q +L AY AEK D + SNPDL+ N AT++K
Sbjct: 178 DGRSWYILGNAYLSLYFNTGQ--NPKISQQALSAYAQAEKVDRKASSNPDLHLNRATLHK 235
Query: 231 YLENYERALSGFEASALKDPSLNATEE-VQMMVNLLDKIENLLKGHAKTK 279
Y E+Y AL GF +A DP+ ++ Q ++ L ++ NLL KTK
Sbjct: 236 YEESYGEALEGFSQAATLDPAWPEPQQREQQLLEFLSRLTNLLASKGKTK 285
Score = 49 (22.3 bits), Expect = 2.0e-45, Sum P(2) = 2.0e-45
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 305 LSEGLNKAVAVVGKVLFFVKHENVTP 330
L G+N V+GKV+F + E P
Sbjct: 327 LQPGVNSGTVVLGKVVFSLTTEEKVP 352
>MGI|MGI:2683584 [details] [associations]
symbol:Ttc5 "tetratricopeptide repeat domain 5"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IDA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IGI] InterPro:IPR011990 InterPro:IPR013026
PROSITE:PS50005 PROSITE:PS50293 MGI:MGI:2683584 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0006281 GO:GO:0045944
GO:GO:0003682 Gene3D:1.25.40.10 InterPro:IPR013105 Pfam:PF07719
CTD:91875 eggNOG:NOG83672 GeneTree:ENSGT00390000006227
HOGENOM:HOG000006922 HOVERGEN:HBG054388 OMA:GKDYSFS
OrthoDB:EOG4TTGHW EMBL:AK157777 EMBL:AK161279 EMBL:BC003272
EMBL:BC025610 EMBL:BC092074 IPI:IPI00410993 RefSeq:NP_001074418.1
UniGene:Mm.276362 PDB:4ABN PDBsum:4ABN ProteinModelPortal:Q99LG4
SMR:Q99LG4 PhosphoSite:Q99LG4 PaxDb:Q99LG4 PRIDE:Q99LG4
Ensembl:ENSMUST00000006451 GeneID:219022 KEGG:mmu:219022
InParanoid:Q3TTN5 NextBio:376529 Bgee:Q99LG4 CleanEx:MM_TTC5
Genevestigator:Q99LG4 GermOnline:ENSMUSG00000006288 Uniprot:Q99LG4
Length = 440
Score = 429 (156.1 bits), Expect = 9.6e-44, Sum P(2) = 9.6e-44
Identities = 107/268 (39%), Positives = 153/268 (57%)
Query: 17 DDLYHVKETFFPANP-DDKVSKLQNESDLALRLLGSVPPEQRKSPTQRATYEYLKGKILD 75
D LY ++++F + +D K Q+ + + L + E S A LKGK L+
Sbjct: 21 DRLYCFRDSYFETHSVEDAGRKQQDVQEEMEKTLQQME-EVLGSAQVEAQALMLKGKALN 79
Query: 76 VVPEYRKDAEDHLSKAVKLNPSLADAWLCLGSCIWKKGDLPAAKNCFNLALSKGPNKKIL 135
V P+Y +AE LSKAVKL P L +AW LG WKKGD+ +A CF+ AL+ NK L
Sbjct: 80 VTPDYSPEAEVLLSKAVKLEPELVEAWNQLGEVYWKKGDVASAHTCFSGALTHCKNKVSL 139
Query: 136 CQLSMLERSMAQGS-ENQAEIVEESIQHAKEAITLDVKDGNSWYNLGNACLTSFFVTGSW 194
LSM+ R + S + + V +S++ AK A+ +DV DG SWY LGNA L+ +F TG
Sbjct: 140 QNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSWYILGNAYLSLYFNTGQ- 198
Query: 195 DHSKLLQ-SLKAYQNAEK-DERMKSNPDLYFNCATVNKYLENYERALSGFEASALKDPSL 252
+ K+ Q +L AY AEK D + SNPDL+ N AT++KY E+Y AL GF +A DP
Sbjct: 199 -NPKISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPVW 257
Query: 253 NATEE-VQMMVNLLDKIENLLKGHAKTK 279
++ Q ++ L ++ +LL+ KTK
Sbjct: 258 PEPQQREQQLLEFLSRLTSLLESKGKTK 285
Score = 49 (22.3 bits), Expect = 9.6e-44, Sum P(2) = 9.6e-44
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 305 LSEGLNKAVAVVGKVLFFVKHENVTP 330
L G+N V+GKV+F + E P
Sbjct: 327 LQPGVNSGTVVLGKVVFSLTTEEKVP 352
>ZFIN|ZDB-GENE-050417-137 [details] [associations]
symbol:ttc5 "tetratricopeptide repeat domain 5"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR011990 InterPro:IPR013026 PROSITE:PS50293
ZFIN:ZDB-GENE-050417-137 Gene3D:1.25.40.10 InterPro:IPR013105
Pfam:PF07719 GeneTree:ENSGT00390000006227 EMBL:CR352328
IPI:IPI00505856 Ensembl:ENSDART00000005326 ArrayExpress:F1QKY3
Uniprot:F1QKY3
Length = 467
Score = 456 (165.6 bits), Expect = 3.5e-43, P = 3.5e-43
Identities = 106/272 (38%), Positives = 162/272 (59%)
Query: 17 DDLYHVKETFFPANPDDKVSKLQNESDLALRLLGSVPPEQRKSPTQRATYEYL--KGKIL 74
DDLY ++ +F + + + QN D+A + ++ + K+ + + ++L +G+ L
Sbjct: 47 DDLYSFRDRYFETHSVEDAGRKQN--DVAQEMAKTLKRLEEKADLYKHSAQFLLLRGRCL 104
Query: 75 DVVPEYRKDAEDHLSKAVKLNPSLADAWLCLGSCIWKKGDLPAAKNCFNLALSKGPNKKI 134
+V PE+ + AE+ LS+AVKL P L + W LG WKKGDL AAK CF AL + NK
Sbjct: 105 NVAPEFSQAAEECLSRAVKLEPGLVEGWNTLGEQYWKKGDLTAAKTCFTGALQQSKNKVS 164
Query: 135 LCQLSMLERSMA-QG-SENQAEIVEESIQHAKEAITLDVKDGNSWYNLGNACLTSFFVTG 192
L LSM+ R + +G ++ Q++ + ES+ A+ A+ LDV DG SWY LGNA ++ FF +G
Sbjct: 165 LRSLSMVLRQLPPEGDAQEQSKRILESVDLARHAVQLDVTDGTSWYILGNAYISMFFTSG 224
Query: 193 SWDHSKLLQSLKAYQNAEKDERMKS-NPDLYFNCATVNKYLENYERALSGFEASALKDPS 251
+ Q+L AY AEK ++ S NPDL+FN AT+ +Y E + AL G+ +A DP+
Sbjct: 225 Q-NPQLSQQALSAYAQAEKIDKASSMNPDLHFNRATLFQYEEMFSSALGGYSRAAALDPA 283
Query: 252 L-NATEEVQMMVNLLDKIENLL--KGHAKTKR 280
NA E + ++N LD++ LL KG K +R
Sbjct: 284 WENAQEREKQLLNYLDQVTILLENKGKIKARR 315
>UNIPROTKB|Q8N0Z6 [details] [associations]
symbol:TTC5 "Tetratricopeptide repeat protein 5"
species:9606 "Homo sapiens" [GO:0006281 "DNA repair" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 PROSITE:PS50005 PROSITE:PS50293 GO:GO:0005634
GO:GO:0005737 GO:GO:0006281 Gene3D:1.25.40.10 InterPro:IPR013105
Pfam:PF07719 EMBL:AL356019 CTD:91875 eggNOG:NOG83672
HOGENOM:HOG000006922 HOVERGEN:HBG054388 OMA:GKDYSFS EMBL:AK074553
EMBL:BC008647 EMBL:BC030822 EMBL:BC053538 IPI:IPI00166123
RefSeq:NP_612385.2 UniGene:Hs.98553 PDB:2XVS PDBsum:2XVS
ProteinModelPortal:Q8N0Z6 SMR:Q8N0Z6 STRING:Q8N0Z6
PhosphoSite:Q8N0Z6 DMDM:229462802 PaxDb:Q8N0Z6 PRIDE:Q8N0Z6
DNASU:91875 Ensembl:ENST00000258821 GeneID:91875 KEGG:hsa:91875
UCSC:uc001vwt.3 GeneCards:GC14M020757 H-InvDB:HIX0202086
HGNC:HGNC:19274 HPA:HPA045008 neXtProt:NX_Q8N0Z6
PharmGKB:PA134919164 InParanoid:Q8N0Z6 PhylomeDB:Q8N0Z6
EvolutionaryTrace:Q8N0Z6 GenomeRNAi:91875 NextBio:77508
ArrayExpress:Q8N0Z6 Bgee:Q8N0Z6 CleanEx:HS_TTC5
Genevestigator:Q8N0Z6 GermOnline:ENSG00000136319 Uniprot:Q8N0Z6
Length = 440
Score = 445 (161.7 bits), Expect = 5.2e-42, P = 5.2e-42
Identities = 108/285 (37%), Positives = 159/285 (55%)
Query: 2 EKVEEDIWARATKAADDLYHVKETFFPANPDDKVSKLQNESDLALRLLGSVPPEQRKSPT 61
E+ + I + + D LY ++ +F + + + Q + + E S
Sbjct: 6 EEEVKPILQKLQELVDQLYSFRDCYFETHSVEDAGRKQQDVQKEMEKTLQQMEEVVGSVQ 65
Query: 62 QRATYEYLKGKILDVVPEYRKDAEDHLSKAVKLNPSLADAWLCLGSCIWKKGDLPAAKNC 121
+A L GK L+V P+Y AE+ LSKAVKL P L +AW LG WKKGD+ AA C
Sbjct: 66 GKAQVLMLTGKALNVTPDYSPKAEELLSKAVKLEPELVEAWNQLGEVYWKKGDVAAAHTC 125
Query: 122 FNLALSKGPNKKILCQLSMLERSMAQGSENQ-AEIVEESIQHAKEAITLDVKDGNSWYNL 180
F+ AL+ NK L LSM+ R + +E++ + V +S++ AK A+ +DV DG SWY L
Sbjct: 126 FSGALTHCRNKVSLQNLSMVLRQLRTDTEDEHSHHVMDSVRQAKLAVQMDVHDGRSWYIL 185
Query: 181 GNACLTSFFVTGSWDHSKLLQ-SLKAYQNAEK-DERMKSNPDLYFNCATVNKYLENYERA 238
GN+ L+ +F TG + K+ Q +L AY AEK D + SNPDL+ N AT++KY E+Y A
Sbjct: 186 GNSYLSLYFSTGQ--NPKISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEA 243
Query: 239 LSGFEASALKDPSL-NATEEVQMMVNLLDKIENLL--KGHAKTKR 280
L GF +A DP+ + Q ++ LD++ +LL KG KTK+
Sbjct: 244 LEGFSRAAALDPAWPEPRQREQQLLEFLDRLTSLLESKGKVKTKK 288
>UNIPROTKB|F1S8F7 [details] [associations]
symbol:TTC5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001440 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00515 PROSITE:PS50005
PROSITE:PS50293 Gene3D:1.25.40.10 CTD:91875
GeneTree:ENSGT00390000006227 OMA:GKDYSFS EMBL:CU571042
RefSeq:XP_001929344.1 UniGene:Ssc.4045 Ensembl:ENSSSCT00000002399
GeneID:100157553 KEGG:ssc:100157553 Uniprot:F1S8F7
Length = 440
Score = 436 (158.5 bits), Expect = 4.6e-41, P = 4.6e-41
Identities = 107/281 (38%), Positives = 155/281 (55%)
Query: 6 EDIWARATKAADDLYHVKETFFPANPDDKVSKLQNESDLALRLLGSVPPEQRKSPTQRAT 65
+++ + + D LY +E +F + + + Q + + E S A
Sbjct: 10 KEVLQKLQELVDQLYTFRECYFETHSVEDAGRKQQDVRKEMEKTLQQMEEVVGSIQGNAQ 69
Query: 66 YEYLKGKILDVVPEYRKDAEDHLSKAVKLNPSLADAWLCLGSCIWKKGDLPAAKNCFNLA 125
L GK L+V P+Y AE+ LSKAVKL P L +AW LG WKKGD+ AA CF+ A
Sbjct: 70 VLMLTGKALNVTPDYSSKAEELLSKAVKLEPKLVEAWNQLGEVYWKKGDVAAAHTCFSGA 129
Query: 126 LSKGPNKKILCQLSMLERSMAQGS-ENQAEIVEESIQHAKEAITLDVKDGNSWYNLGNAC 184
L+ NK L LSM+ R + S + + V +S++ AK A+ +D+ DG SWY LGNA
Sbjct: 130 LTHCKNKVSLQNLSMVLRQLRTDSGDEHSRHVMDSVRQAKLAVQMDILDGRSWYILGNAY 189
Query: 185 LTSFFVTGSWDHSKLLQ-SLKAYQNAEK-DERMKSNPDLYFNCATVNKYLENYERALSGF 242
L+ +F TG + K+ Q +L AY AEK D SNPDL+ N AT++KY ENY AL GF
Sbjct: 190 LSLYFNTGQ--NPKISQQALSAYAQAEKVDRTASSNPDLHLNRATLHKYEENYGEALEGF 247
Query: 243 EASALKDPSL-NATEEVQMMVNLLDKIENLL--KGHAKTKR 280
+A DP+ + Q +++ L+++ +LL KG KTK+
Sbjct: 248 FRAAALDPAWPEPRQREQQLLDFLNRLTSLLESKGKVKTKK 288
>UNIPROTKB|G4NAC6 [details] [associations]
symbol:MGG_03196 "RCM-1" species:242507 "Magnaporthe oryzae
70-15" [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001440 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF00515 Pfam:PF13181 PROSITE:PS50005
PROSITE:PS50293 SMART:SM00028 Gene3D:1.25.40.10 InterPro:IPR013105
Pfam:PF07719 EMBL:CM001234 RefSeq:XP_003716790.1
ProteinModelPortal:G4NAC6 EnsemblFungi:MGG_03196T0 GeneID:2676469
KEGG:mgr:MGG_03196 Uniprot:G4NAC6
Length = 923
Score = 118 (46.6 bits), Expect = 0.00082, P = 0.00082
Identities = 40/156 (25%), Positives = 68/156 (43%)
Query: 100 DAWLCLGSCIWKKGDLPAAKNCFNLALSKGP-NKKILCQLSMLERSMAQGSENQAEIVEE 158
D W +G ++ DL AK + L P + K+L QL L + ++Q E
Sbjct: 224 DIWFQIGHVHEQQKDLDNAKAAYQRVLDGDPKHAKVLQQLGWLHHQQSSSFQSQ----ER 279
Query: 159 SIQHAKEAITLDVKDGNSWYNLGNACLTSFFVTGSWDHSKLLQSLKAYQNAE-KDERMKS 217
+I++ ++++ D D SWY LG C S K ++ +AYQ A +D R
Sbjct: 280 AIEYLEQSVAADNSDAQSWYLLGR-CYMS--------QQKYPKAYEAYQQAVYRDGR--- 327
Query: 218 NPDLYFNCATVNKYLENYERALSGFEASALKDPSLN 253
NP + + + + Y AL + + +P L+
Sbjct: 328 NPTFWCSIGVLYYQINQYRDALDAYSRAIRLNPYLS 363
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.130 0.376 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 331 315 0.00082 116 3 11 23 0.44 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 7
No. of states in DFA: 607 (65 KB)
Total size of DFA: 226 KB (2125 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 28.20u 0.14s 28.34t Elapsed: 00:00:01
Total cpu time: 28.21u 0.14s 28.35t Elapsed: 00:00:01
Start: Fri May 10 23:23:31 2013 End: Fri May 10 23:23:32 2013