BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020062
(331 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|296088539|emb|CBI37530.3| unnamed protein product [Vitis vinifera]
Length = 528
Score = 546 bits (1407), Expect = e-153, Method: Compositional matrix adjust.
Identities = 270/329 (82%), Positives = 302/329 (91%), Gaps = 1/329 (0%)
Query: 1 MDEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRT 60
+++WPII+PLPSYGRGRERLGGRHISLIHGD L NV+ITG NGTIDGQG+MWW+LWWNRT
Sbjct: 148 LEDWPIIEPLPSYGRGRERLGGRHISLIHGDALANVVITGQNGTIDGQGKMWWELWWNRT 207
Query: 61 LKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGID 120
L+HTRGHL+E+ NS+NILISNLTF NSPFWTIHPVYC NVVIK +TILAPLNAPNTDGID
Sbjct: 208 LEHTRGHLLEIKNSHNILISNLTFMNSPFWTIHPVYCSNVVIKDVTILAPLNAPNTDGID 267
Query: 121 PDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGS 180
PDSSTNVCIEDCYIESGDDLVAVKSGWD YGIAMARPSSNIIVRR+SGTTPTCSGVGIGS
Sbjct: 268 PDSSTNVCIEDCYIESGDDLVAVKSGWDQYGIAMARPSSNIIVRRLSGTTPTCSGVGIGS 327
Query: 181 EMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSND 240
EMSGGI NVT++ LH+WD+AAGVRIKTDKGRGGY+ NITI NI+MERVK+PIR SRGSND
Sbjct: 328 EMSGGISNVTMEDLHIWDSAAGVRIKTDKGRGGYVVNITINNIRMERVKVPIRFSRGSND 387
Query: 241 HPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKW 300
HPD+GWDPKA+PKI+GI NVVS+N+TKAP+L GI G +E ICMKNV+LLGLAP+AKW
Sbjct: 388 HPDDGWDPKAVPKIKGIFISNVVSLNSTKAPLLEGIEGAPYEGICMKNVTLLGLAPAAKW 447
Query: 301 QCQFVSGFTSQVFPLPCPQLQ-NKSSSWC 328
C+FVSGFT VFP+ CPQ+Q N SSSWC
Sbjct: 448 HCEFVSGFTDAVFPVSCPQMQSNVSSSWC 476
>gi|225431447|ref|XP_002274138.1| PREDICTED: probable polygalacturonase [Vitis vinifera]
Length = 488
Score = 546 bits (1407), Expect = e-153, Method: Compositional matrix adjust.
Identities = 270/329 (82%), Positives = 302/329 (91%), Gaps = 1/329 (0%)
Query: 1 MDEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRT 60
+++WPII+PLPSYGRGRERLGGRHISLIHGD L NV+ITG NGTIDGQG+MWW+LWWNRT
Sbjct: 148 LEDWPIIEPLPSYGRGRERLGGRHISLIHGDALANVVITGQNGTIDGQGKMWWELWWNRT 207
Query: 61 LKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGID 120
L+HTRGHL+E+ NS+NILISNLTF NSPFWTIHPVYC NVVIK +TILAPLNAPNTDGID
Sbjct: 208 LEHTRGHLLEIKNSHNILISNLTFMNSPFWTIHPVYCSNVVIKDVTILAPLNAPNTDGID 267
Query: 121 PDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGS 180
PDSSTNVCIEDCYIESGDDLVAVKSGWD YGIAMARPSSNIIVRR+SGTTPTCSGVGIGS
Sbjct: 268 PDSSTNVCIEDCYIESGDDLVAVKSGWDQYGIAMARPSSNIIVRRLSGTTPTCSGVGIGS 327
Query: 181 EMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSND 240
EMSGGI NVT++ LH+WD+AAGVRIKTDKGRGGY+ NITI NI+MERVK+PIR SRGSND
Sbjct: 328 EMSGGISNVTMEDLHIWDSAAGVRIKTDKGRGGYVVNITINNIRMERVKVPIRFSRGSND 387
Query: 241 HPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKW 300
HPD+GWDPKA+PKI+GI NVVS+N+TKAP+L GI G +E ICMKNV+LLGLAP+AKW
Sbjct: 388 HPDDGWDPKAVPKIKGIFISNVVSLNSTKAPLLEGIEGAPYEGICMKNVTLLGLAPAAKW 447
Query: 301 QCQFVSGFTSQVFPLPCPQLQ-NKSSSWC 328
C+FVSGFT VFP+ CPQ+Q N SSSWC
Sbjct: 448 HCEFVSGFTDAVFPVSCPQMQSNVSSSWC 476
>gi|224096000|ref|XP_002310517.1| predicted protein [Populus trichocarpa]
gi|222853420|gb|EEE90967.1| predicted protein [Populus trichocarpa]
Length = 445
Score = 545 bits (1405), Expect = e-153, Method: Compositional matrix adjust.
Identities = 269/330 (81%), Positives = 295/330 (89%), Gaps = 1/330 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
EWPII+PLPSYGRGRERLGGRHISL+HGD LTNV+ITG NGTIDGQG+MWW+LWWNRTL+
Sbjct: 108 EWPIIEPLPSYGRGRERLGGRHISLVHGDGLTNVVITGNNGTIDGQGKMWWELWWNRTLE 167
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
HTRGHLVELMNSNNILI+NLTF N+PFWTIHPVYC NVV+K MTILAPL APNTDGIDPD
Sbjct: 168 HTRGHLVELMNSNNILIANLTFCNAPFWTIHPVYCSNVVVKDMTILAPLKAPNTDGIDPD 227
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SSTNVCIEDCYIESGDDLVAVKSGWD YGI MARPSSNI+VRRVSGTTPTCSGVGIGSEM
Sbjct: 228 SSTNVCIEDCYIESGDDLVAVKSGWDQYGIKMARPSSNIVVRRVSGTTPTCSGVGIGSEM 287
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGIFN+T++ LHVWD+AAGVRIKTD GRGGYI NITI N+ MERVK+PIR SRGSNDHP
Sbjct: 288 SGGIFNITIEDLHVWDSAAGVRIKTDNGRGGYIANITISNVTMERVKVPIRFSRGSNDHP 347
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQC 302
DEGWDPKA+P ++GIS NV+S N+TKAPVL G+ F ICMKNVSLLG+ S W C
Sbjct: 348 DEGWDPKAVPVVKGISIRNVISFNSTKAPVLEGVEDAPFGGICMKNVSLLGVVSSLSWHC 407
Query: 303 QFVSGFTSQVFPLPCPQLQ-NKSSSWCSFS 331
+FVSGF +VFP PCPQLQ N SSSWCS+S
Sbjct: 408 EFVSGFADEVFPTPCPQLQSNISSSWCSYS 437
>gi|255571381|ref|XP_002526639.1| polygalacturonase, putative [Ricinus communis]
gi|223534031|gb|EEF35751.1| polygalacturonase, putative [Ricinus communis]
Length = 480
Score = 540 bits (1391), Expect = e-151, Method: Compositional matrix adjust.
Identities = 269/330 (81%), Positives = 295/330 (89%), Gaps = 1/330 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
EWPII+PLPSYGRGRERLGGRHISLIHG+ LTNVIITG NG+IDGQG+MWW+LWWNRTL+
Sbjct: 151 EWPIIEPLPSYGRGRERLGGRHISLIHGNGLTNVIITGNNGSIDGQGKMWWELWWNRTLE 210
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
HTRGHLVELMNS+NILISNLTFRNSPFWTIHPVYC NVV+K MTILAPLNAPNTDGIDPD
Sbjct: 211 HTRGHLVELMNSHNILISNLTFRNSPFWTIHPVYCSNVVVKDMTILAPLNAPNTDGIDPD 270
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SSTNVCIEDCYIESGDDLVAVKSGWD YGI ARPSS+IIVRRVSGTTPTCSGVGIGSEM
Sbjct: 271 SSTNVCIEDCYIESGDDLVAVKSGWDQYGIKTARPSSHIIVRRVSGTTPTCSGVGIGSEM 330
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGIFNV + LH+WD+AAGVRIKTD GRGGYI NIT+ NI MERVKIPIR SRGSNDHP
Sbjct: 331 SGGIFNVMIQDLHIWDSAAGVRIKTDIGRGGYISNITLHNITMERVKIPIRFSRGSNDHP 390
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQC 302
DE WDP A+P ++G+S NV+ VN+TKAPVL GI F ICMKNV+L+GLA S W C
Sbjct: 391 DERWDPNAIPVVKGVSISNVICVNSTKAPVLQGIKDAPFGGICMKNVTLVGLASSTSWHC 450
Query: 303 QFVSGFTSQVFPLPCPQLQNK-SSSWCSFS 331
+FVSGF ++VFP+PCPQLQN SSSWCS+S
Sbjct: 451 EFVSGFANEVFPMPCPQLQNNDSSSWCSYS 480
>gi|147776708|emb|CAN76963.1| hypothetical protein VITISV_043959 [Vitis vinifera]
Length = 479
Score = 537 bits (1384), Expect = e-150, Method: Compositional matrix adjust.
Identities = 263/326 (80%), Positives = 298/326 (91%)
Query: 1 MDEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRT 60
+++WPII+PLPSYGRGRERLGGRHISLIHGD L NV+ITG NGTIDGQG+MWW+LWWNRT
Sbjct: 137 LEDWPIIEPLPSYGRGRERLGGRHISLIHGDALANVVITGQNGTIDGQGKMWWELWWNRT 196
Query: 61 LKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGID 120
L+HTRGHL+E+ NS+NILISNLTF NSPFWTIHPVYC NVVIK +TILAPLNAPNTDGID
Sbjct: 197 LEHTRGHLLEIKNSHNILISNLTFMNSPFWTIHPVYCSNVVIKDVTILAPLNAPNTDGID 256
Query: 121 PDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGS 180
PDSSTNVCIEDCYIESGDDLVAVKSGWD YGIAMARPSSNIIVRR+SGTTPTCSGVGIGS
Sbjct: 257 PDSSTNVCIEDCYIESGDDLVAVKSGWDQYGIAMARPSSNIIVRRLSGTTPTCSGVGIGS 316
Query: 181 EMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSND 240
EMSGGI NVT++ LH+WD+AAGVRIKTDKGRGGY+ NITI NI+MERVK+PIR SRGSND
Sbjct: 317 EMSGGISNVTMEDLHIWDSAAGVRIKTDKGRGGYVVNITINNIRMERVKVPIRFSRGSND 376
Query: 241 HPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKW 300
HPD+ WDPKA+PKI+GI NVVS+N+TKAP+L GI G +E ICMKNV+LLGLAP+AKW
Sbjct: 377 HPDDXWDPKAVPKIKGIFISNVVSLNSTKAPLLEGIEGAPYEGICMKNVTLLGLAPAAKW 436
Query: 301 QCQFVSGFTSQVFPLPCPQLQNKSSS 326
C+FVSGFT VFP+ CPQ+Q+ ++
Sbjct: 437 HCEFVSGFTDAVFPVSCPQMQSNEAT 462
>gi|356516364|ref|XP_003526865.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 477
Score = 530 bits (1366), Expect = e-148, Method: Compositional matrix adjust.
Identities = 256/330 (77%), Positives = 303/330 (91%), Gaps = 1/330 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
EWPII+PLPSYGRGRERLGGRHISLIHG+ ++NV+ITG NGT+DGQG+MWW+LWWNRTL+
Sbjct: 148 EWPIIEPLPSYGRGRERLGGRHISLIHGNGISNVVITGQNGTVDGQGRMWWELWWNRTLE 207
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
HTRGHL+EL++S+N+LISNLTFRNSPFWTIHPVYC NVV+KGMTILAPLNAPNTDGIDPD
Sbjct: 208 HTRGHLLELISSDNVLISNLTFRNSPFWTIHPVYCSNVVVKGMTILAPLNAPNTDGIDPD 267
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SSTNVCIED YIESGDDLVA+KSGWDHYGI MA PS+NIIVRR+SGTTPTCSGVGIGSEM
Sbjct: 268 SSTNVCIEDNYIESGDDLVAIKSGWDHYGITMAHPSTNIIVRRISGTTPTCSGVGIGSEM 327
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI N+T++ LHVWD+AAGVRIK+DKGRGGYI N++I +I+MERVKIPIR SRGSNDHP
Sbjct: 328 SGGISNITIENLHVWDSAAGVRIKSDKGRGGYITNVSISDIRMERVKIPIRFSRGSNDHP 387
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQC 302
D+GWDPKA+P+ + I NVVSVN+TKAPVL G+ G+ FE +C KN++L G+A SA+W+C
Sbjct: 388 DDGWDPKAVPRFKDILISNVVSVNSTKAPVLEGVEGSSFEGLCFKNITLHGVALSARWRC 447
Query: 303 QFVSGFTSQVFPLPCPQLQNKS-SSWCSFS 331
++VSGF ++VFP+PCP+L+N S SSWCS S
Sbjct: 448 EYVSGFATEVFPVPCPELRNNSYSSWCSAS 477
>gi|449459262|ref|XP_004147365.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 472
Score = 529 bits (1362), Expect = e-148, Method: Compositional matrix adjust.
Identities = 258/329 (78%), Positives = 297/329 (90%), Gaps = 1/329 (0%)
Query: 2 DEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTL 61
DEWPII+PLPSYGRGRERLGGRHISLIHG+ L+NV+ITG NGTIDGQG+MWW+LWWNRTL
Sbjct: 142 DEWPIIEPLPSYGRGRERLGGRHISLIHGNALSNVVITGENGTIDGQGKMWWELWWNRTL 201
Query: 62 KHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDP 121
HTRGHLVEL+NS+NILISNLTF+NSPFWTIHPVYC NVVIK MTILAPLNAPNTDGIDP
Sbjct: 202 NHTRGHLVELINSHNILISNLTFKNSPFWTIHPVYCSNVVIKDMTILAPLNAPNTDGIDP 261
Query: 122 DSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSE 181
DSSTNVCIEDCYIESGDDLVAVKSGWD YGI +ARPSSNI++RRVSGTTPTCSGVGIGSE
Sbjct: 262 DSSTNVCIEDCYIESGDDLVAVKSGWDQYGINLARPSSNIVIRRVSGTTPTCSGVGIGSE 321
Query: 182 MSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDH 241
MSGGI N+T++ L+VWD+AAG+RIK+D+GRGGYI N++I N M RVK+ IR SRGSNDH
Sbjct: 322 MSGGISNITIEDLNVWDSAAGIRIKSDQGRGGYIANVSITNFVMNRVKMAIRFSRGSNDH 381
Query: 242 PDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQ 301
PDE +DPKA+PK++GI N++S+N+TKAPVL GI GT ++ +CMKNV++LGL PSAKW
Sbjct: 382 PDEQFDPKAVPKVKGIFITNLMSLNSTKAPVLYGIAGTSYDGVCMKNVTILGLTPSAKWH 441
Query: 302 CQFVSGFTSQVFPLPCPQLQNKS-SSWCS 329
C FVSGF++ VFP PCPQLQN + SS CS
Sbjct: 442 CAFVSGFSTSVFPTPCPQLQNTTFSSLCS 470
>gi|224083446|ref|XP_002307030.1| predicted protein [Populus trichocarpa]
gi|222856479|gb|EEE94026.1| predicted protein [Populus trichocarpa]
Length = 394
Score = 529 bits (1362), Expect = e-148, Method: Compositional matrix adjust.
Identities = 261/319 (81%), Positives = 286/319 (89%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
EWPII+PLPSYGRGRERLGGRHISLIHGD L NV+ITG NGTIDGQG+MWW+LWWNRTL+
Sbjct: 74 EWPIIEPLPSYGRGRERLGGRHISLIHGDGLANVVITGNNGTIDGQGKMWWELWWNRTLE 133
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
HTRGHLVELMNS +ILISNLTFRNSPFWTIHP+YC N+V+K MTILAPLNAPNTDGIDPD
Sbjct: 134 HTRGHLVELMNSQDILISNLTFRNSPFWTIHPIYCSNLVVKDMTILAPLNAPNTDGIDPD 193
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SSTNVCIEDCYIESGDDLVAVKSGWD YGI MARPSSNII+RRVSGTTPTCSGVGIGSEM
Sbjct: 194 SSTNVCIEDCYIESGDDLVAVKSGWDQYGIKMARPSSNIIIRRVSGTTPTCSGVGIGSEM 253
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGIFNVT++ LHVWD+AAGVRIKTDKGRGGYI NITI +I MERVKIPIR S GSNDHP
Sbjct: 254 SGGIFNVTIEDLHVWDSAAGVRIKTDKGRGGYIANITISDITMERVKIPIRFSSGSNDHP 313
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQC 302
DE WDPKA+P ++G+S N+VS N+TKAPVL GI F ICMKN+SLLG+ S W+C
Sbjct: 314 DERWDPKAVPVVKGVSITNLVSFNSTKAPVLEGIEDAPFGGICMKNISLLGVVSSPSWRC 373
Query: 303 QFVSGFTSQVFPLPCPQLQ 321
+FVSGF + VFP PCPQLQ
Sbjct: 374 EFVSGFANDVFPTPCPQLQ 392
>gi|357464681|ref|XP_003602622.1| Germin-like protein [Medicago truncatula]
gi|355491670|gb|AES72873.1| Germin-like protein [Medicago truncatula]
Length = 775
Score = 529 bits (1362), Expect = e-148, Method: Compositional matrix adjust.
Identities = 251/328 (76%), Positives = 294/328 (89%)
Query: 1 MDEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRT 60
+ EWPII+PLPSYGRGRERLGGRHISLIH + + NV+ITG NGT+DGQG+MWW+LWWNRT
Sbjct: 147 IKEWPIIEPLPSYGRGRERLGGRHISLIHANGVRNVVITGENGTVDGQGRMWWELWWNRT 206
Query: 61 LKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGID 120
L HTRGHL+ELMNS N+L+SNLTFRNSPFWTIHPVYC NVVIKGMTILAPLNAPNTDGID
Sbjct: 207 LVHTRGHLLELMNSENVLVSNLTFRNSPFWTIHPVYCSNVVIKGMTILAPLNAPNTDGID 266
Query: 121 PDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGS 180
PDSSTNVCIED YIESGDDLVA+KSGWD YGIA+A+PS+NIIV RVSGTTPTCSGVGIGS
Sbjct: 267 PDSSTNVCIEDNYIESGDDLVAIKSGWDQYGIAVAKPSTNIIVSRVSGTTPTCSGVGIGS 326
Query: 181 EMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSND 240
EMSGGI N+T++ LHVW++AAGVRIK+D GRGGYI+N++I NI+MERVKIPIR SRGSND
Sbjct: 327 EMSGGISNITIENLHVWNSAAGVRIKSDNGRGGYIKNVSISNIRMERVKIPIRFSRGSND 386
Query: 241 HPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKW 300
HPD+GWDPKA+P+ + I NV+SVN+TKAPVL G+ G+ FE +C KN++ LG+A SA W
Sbjct: 387 HPDDGWDPKAVPRFKDILISNVISVNSTKAPVLEGVKGSSFEGLCFKNITFLGVALSATW 446
Query: 301 QCQFVSGFTSQVFPLPCPQLQNKSSSWC 328
C++V+GFT+ VFPLPCP+LQN +S C
Sbjct: 447 HCEYVAGFTNGVFPLPCPELQNNGTSSC 474
>gi|22329119|ref|NP_195070.2| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|27754320|gb|AAO22613.1| putative polygalacturonase [Arabidopsis thaliana]
gi|28393881|gb|AAO42348.1| putative polygalacturonase [Arabidopsis thaliana]
gi|332660825|gb|AEE86225.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 475
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 249/332 (75%), Positives = 292/332 (87%), Gaps = 2/332 (0%)
Query: 1 MDEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRT 60
+DEWPII+PLPSYGRGRER GGRHISLIHGD+LTNV+ITG NGTIDGQG+MWW+LWWNRT
Sbjct: 143 LDEWPIIEPLPSYGRGRERPGGRHISLIHGDNLTNVVITGENGTIDGQGKMWWELWWNRT 202
Query: 61 LKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGID 120
L HTRGHL+EL NS+NILISNLT NSPFWTIHPVYC NVVI+ MTILAP+NAPNTDGID
Sbjct: 203 LVHTRGHLIELKNSHNILISNLTLLNSPFWTIHPVYCSNVVIRNMTILAPMNAPNTDGID 262
Query: 121 PDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGS 180
PDSSTNVCIEDCYIESGDDLVAVKSGWD YG+A+ARPSSNI++RR+SGTT TCSGVGIGS
Sbjct: 263 PDSSTNVCIEDCYIESGDDLVAVKSGWDQYGMAVARPSSNIVIRRISGTTRTCSGVGIGS 322
Query: 181 EMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSND 240
EMSGGIFN+TV+ +HVWD+AAG+RIKTDKGRGGYI NIT N+ +E+VK+PIR S GSND
Sbjct: 323 EMSGGIFNITVEDIHVWDSAAGLRIKTDKGRGGYISNITFNNVLLEKVKVPIRFSSGSND 382
Query: 241 HPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKW 300
H D+ WDPKALP+++GI NVVS+N+ KAP+L G+ GT F+++C++NV+LLGL + KW
Sbjct: 383 HSDDKWDPKALPRVKGIYISNVVSLNSRKAPMLLGVEGTSFQDVCLRNVTLLGLPKTEKW 442
Query: 301 QCQFVSGFTSQVFPLPCPQLQNKSSS--WCSF 330
+C+ VSG+ S VFPL CPQL K S CS+
Sbjct: 443 KCKDVSGYASDVFPLSCPQLLQKKGSIAQCSY 474
>gi|297802658|ref|XP_002869213.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297315049|gb|EFH45472.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 475
Score = 513 bits (1320), Expect = e-143, Method: Compositional matrix adjust.
Identities = 247/332 (74%), Positives = 292/332 (87%), Gaps = 2/332 (0%)
Query: 1 MDEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRT 60
+DEWPI++PLPSYGRGRER GGRHISLIHGD+LTNV+ITG NGTIDGQG+MWW+LWWNRT
Sbjct: 143 LDEWPIVEPLPSYGRGRERPGGRHISLIHGDNLTNVVITGENGTIDGQGKMWWELWWNRT 202
Query: 61 LKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGID 120
L HTRGHL+EL N +NILISNLT NSPFWTIHPVYC NVVI+ MTILAP+NAPNTDGID
Sbjct: 203 LVHTRGHLIELKNCHNILISNLTLLNSPFWTIHPVYCSNVVIRNMTILAPINAPNTDGID 262
Query: 121 PDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGS 180
PDSSTNVCIEDCYIESGDDL+AVKSGWD YG+A+ARPSSNI++RR+SGTT TCSGVGIGS
Sbjct: 263 PDSSTNVCIEDCYIESGDDLIAVKSGWDQYGMAVARPSSNIVIRRISGTTRTCSGVGIGS 322
Query: 181 EMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSND 240
EMSGGIFN+TV+ +HVWD+AAG+RIKTDKGRGGYI NIT N+ +E+VK+PIR S GSND
Sbjct: 323 EMSGGIFNITVEDIHVWDSAAGLRIKTDKGRGGYISNITFNNVLLEKVKVPIRFSSGSND 382
Query: 241 HPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKW 300
H D+ WDPKALP+++GI NVVS+N+ KAP+L G+ GT F+++C++NV+LLGL + KW
Sbjct: 383 HSDDKWDPKALPRVKGIYISNVVSLNSRKAPMLLGVEGTSFQDVCLRNVTLLGLPQTEKW 442
Query: 301 QCQFVSGFTSQVFPLPCPQLQNK--SSSWCSF 330
+C+ VSG+ S VFPL CPQL K S S CS+
Sbjct: 443 KCKDVSGYASDVFPLSCPQLLQKKGSISQCSY 474
>gi|326524051|dbj|BAJ97036.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 482
Score = 490 bits (1261), Expect = e-136, Method: Compositional matrix adjust.
Identities = 228/331 (68%), Positives = 271/331 (81%), Gaps = 2/331 (0%)
Query: 2 DEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTL 61
+EWP+I PLPSYGRGRERLG RHISLIHG L +V+ITG NGTIDGQG+MWW+LWWNRTL
Sbjct: 151 EEWPLIAPLPSYGRGRERLGPRHISLIHGQDLNDVVITGSNGTIDGQGRMWWELWWNRTL 210
Query: 62 KHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDP 121
HTRGHL+EL+NS N+LISN+T RNSPFWT+HPVYCRNVVIK +TILAPLNAPNTDGIDP
Sbjct: 211 NHTRGHLIELVNSTNVLISNVTLRNSPFWTVHPVYCRNVVIKDLTILAPLNAPNTDGIDP 270
Query: 122 DSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSE 181
DSS+ VCIEDCYIESGDDLVAVKSGWD YGI++ +PSSNII++RVSGTTPTCSGVG GSE
Sbjct: 271 DSSSEVCIEDCYIESGDDLVAVKSGWDQYGISVGKPSSNIIIQRVSGTTPTCSGVGFGSE 330
Query: 182 MSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDH 241
MSGGI NV V LH+W++A+ VR+KTD GRGGYI NITI N+ ME+VK+PIR SRGS+DH
Sbjct: 331 MSGGISNVLVRDLHIWNSASAVRLKTDVGRGGYITNITIANVTMEKVKVPIRFSRGSDDH 390
Query: 242 PDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQ 301
D+ +D ALP I GI V++V V+ +AP+L + G +E IC +NVSL + +WQ
Sbjct: 391 SDDKYDRTALPMISGIHIVDIVGVDVQRAPMLEAVHGAVYEGICFRNVSLRAIRRQVRWQ 450
Query: 302 CQFVSGFTSQVFPLPCPQLQN--KSSSWCSF 330
C+ V G +VFP PC +L+N SSSWC
Sbjct: 451 CESVYGEAHEVFPAPCEELRNNGSSSSWCGL 481
>gi|449532729|ref|XP_004173333.1| PREDICTED: probable polygalacturonase-like, partial [Cucumis
sativus]
Length = 332
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 226/295 (76%), Positives = 263/295 (89%), Gaps = 1/295 (0%)
Query: 36 VIITGYNGTIDGQGQMWWDLWWNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPV 95
V+ +G NGTIDGQG+MWW+LWWNRTL HTRGHLVEL+NS+NILISNLTF+NSPFWTIHPV
Sbjct: 36 VVFSGENGTIDGQGKMWWELWWNRTLNHTRGHLVELINSHNILISNLTFKNSPFWTIHPV 95
Query: 96 YCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMA 155
YC NVVIK MTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWD YGI +A
Sbjct: 96 YCSNVVIKDMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGINLA 155
Query: 156 RPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYI 215
RPSSNI++RRVSGTTPTCSGVGIGSEMSGGI N+T++ L+VWD+AAG+RIK+D+GRGGYI
Sbjct: 156 RPSSNIVIRRVSGTTPTCSGVGIGSEMSGGISNITIEDLNVWDSAAGIRIKSDQGRGGYI 215
Query: 216 ENITIRNIKMERVKIPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAG 275
N++I N M RVK+ IR SRGSNDHPDE +DPKA+PK++GI N++S+N+TKAPVL G
Sbjct: 216 ANVSITNFVMNRVKMAIRFSRGSNDHPDEQFDPKAVPKVKGIFITNLMSLNSTKAPVLYG 275
Query: 276 IIGTQFEEICMKNVSLLGLAPSAKWQCQFVSGFTSQVFPLPCPQLQNKS-SSWCS 329
I GT ++ +CMKNV++LGL PSAKW C FVSGF++ VFP PCPQLQN + SS CS
Sbjct: 276 IAGTSYDGVCMKNVTILGLTPSAKWHCAFVSGFSTSVFPTPCPQLQNTTFSSLCS 330
>gi|242077899|ref|XP_002443718.1| hypothetical protein SORBIDRAFT_07g000740 [Sorghum bicolor]
gi|241940068|gb|EES13213.1| hypothetical protein SORBIDRAFT_07g000740 [Sorghum bicolor]
Length = 497
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 222/330 (67%), Positives = 268/330 (81%), Gaps = 1/330 (0%)
Query: 2 DEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTL 61
+EWP+I PLPSYGRGRERLG RHISLIHG+ L +V+ITG NGTIDGQG MWW+LWWNRTL
Sbjct: 167 EEWPLIAPLPSYGRGRERLGPRHISLIHGEGLNDVVITGSNGTIDGQGNMWWELWWNRTL 226
Query: 62 KHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDP 121
HTRGHL+EL+NS NILIS++T RNSPFWT+HPVYC NVV+K +TILAPLNAPNTDGIDP
Sbjct: 227 NHTRGHLIELVNSTNILISSITLRNSPFWTVHPVYCSNVVMKDLTILAPLNAPNTDGIDP 286
Query: 122 DSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSE 181
DSS+ VCIEDCYIESGDDLVAVKSGWD YGI++ +PS+NI+++RVSGTTPTCSGVG GSE
Sbjct: 287 DSSSEVCIEDCYIESGDDLVAVKSGWDQYGISLGKPSTNIVIQRVSGTTPTCSGVGFGSE 346
Query: 182 MSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDH 241
MSGGI NV V LHVW++A VR+KTD GRGGYI NITI N+ ME+VK+PIR SRG++DH
Sbjct: 347 MSGGISNVLVRDLHVWNSAQAVRLKTDVGRGGYITNITISNVTMEKVKVPIRFSRGADDH 406
Query: 242 PDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQ 301
D+ +D ALP+I + +VV V+ +AP+L + G +EEIC +N SL G+ +W
Sbjct: 407 SDDNYDRTALPRISNVLISDVVGVDLQRAPMLEAVPGAVYEEICFRNFSLRGIRRQDRWH 466
Query: 302 CQFVSGFTSQVFPLPCPQL-QNKSSSWCSF 330
C+ V G +VFP PC + +N SSSWC F
Sbjct: 467 CESVYGEAHEVFPAPCEEFRKNGSSSWCGF 496
>gi|125559874|gb|EAZ05322.1| hypothetical protein OsI_27527 [Oryza sativa Indica Group]
Length = 482
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 222/331 (67%), Positives = 268/331 (80%), Gaps = 1/331 (0%)
Query: 2 DEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTL 61
+EWP+I PLPSYGRGRERLG RHISLIHG+ L +V+ITG NGTIDGQG++WWDLWWNRTL
Sbjct: 152 EEWPLIAPLPSYGRGRERLGPRHISLIHGEGLDDVVITGNNGTIDGQGRIWWDLWWNRTL 211
Query: 62 KHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDP 121
HTRGHL+EL++S NI+ISN+T RNSPFWT+HPVYCRNVVI+ +T+LAPLNAPNTDGIDP
Sbjct: 212 NHTRGHLIELVDSTNIMISNITLRNSPFWTVHPVYCRNVVIRNLTVLAPLNAPNTDGIDP 271
Query: 122 DSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSE 181
DSS+ VCIEDCYIESGDDLVAVKSGWD YGI++ +PSSNII++RVSGTTPTCSGVG GSE
Sbjct: 272 DSSSEVCIEDCYIESGDDLVAVKSGWDQYGISVGKPSSNIIIQRVSGTTPTCSGVGFGSE 331
Query: 182 MSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDH 241
MSGGI NV + LHVW++A VRIKTD GRGGYI NITI N++ME+VK+PIR SRG++DH
Sbjct: 332 MSGGISNVIIRDLHVWNSAQAVRIKTDVGRGGYITNITIENVRMEKVKVPIRFSRGADDH 391
Query: 242 PDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQ 301
D+ +D ALPKI + +VV V+ +AP+L + G +E IC +NVSL + +W
Sbjct: 392 SDDKYDRSALPKISDVRIRDVVGVDLQRAPMLEAVHGAVYEGICFRNVSLTVIKRQDRWH 451
Query: 302 CQFVSGFTSQVFPLPCPQL-QNKSSSWCSFS 331
C+ V G V P PC + +N SSSWC S
Sbjct: 452 CESVYGEAHDVLPAPCEEFRRNGSSSWCGHS 482
>gi|115474399|ref|NP_001060796.1| Os08g0107300 [Oryza sativa Japonica Group]
gi|42408232|dbj|BAD09389.1| putative exo-poly-alpha-D-galacturonosidase precursor [Oryza sativa
Japonica Group]
gi|113622765|dbj|BAF22710.1| Os08g0107300 [Oryza sativa Japonica Group]
Length = 482
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 222/331 (67%), Positives = 268/331 (80%), Gaps = 1/331 (0%)
Query: 2 DEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTL 61
+EWP+I PLPSYGRGRERLG RHISLIHG+ L +V+ITG NGTIDGQG++WWDLWWNRTL
Sbjct: 152 EEWPLIAPLPSYGRGRERLGPRHISLIHGEGLDDVVITGNNGTIDGQGRIWWDLWWNRTL 211
Query: 62 KHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDP 121
HTRGHL+EL++S NI+ISN+T RNSPFWT+HPVYCRNVVI+ +T+LAPLNAPNTDGIDP
Sbjct: 212 NHTRGHLIELVDSTNIMISNITLRNSPFWTVHPVYCRNVVIRNLTVLAPLNAPNTDGIDP 271
Query: 122 DSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSE 181
DSS+ VCIEDCYIESGDDLVAVKSGWD YGI++ +PSSNII++RVSGTTPTCSGVG GSE
Sbjct: 272 DSSSEVCIEDCYIESGDDLVAVKSGWDQYGISVGKPSSNIIIQRVSGTTPTCSGVGFGSE 331
Query: 182 MSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDH 241
MSGGI NV + LHVW++A VRIKTD GRGGYI NITI N++ME+VK+PIR SRG++DH
Sbjct: 332 MSGGISNVIIRDLHVWNSAQAVRIKTDVGRGGYITNITIENVRMEKVKVPIRFSRGADDH 391
Query: 242 PDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQ 301
D+ +D ALPKI + +VV V+ +AP+L + G +E IC +NVSL + +W
Sbjct: 392 SDDKYDRSALPKISDVRIRDVVGVDLQRAPMLEAVHGAVYEGICFRNVSLTVIKRQDRWH 451
Query: 302 CQFVSGFTSQVFPLPCPQL-QNKSSSWCSFS 331
C+ V G V P PC + +N SSSWC S
Sbjct: 452 CESVYGEAHDVLPAPCEEFRRNGSSSWCGHS 482
>gi|125601928|gb|EAZ41253.1| hypothetical protein OsJ_25761 [Oryza sativa Japonica Group]
Length = 482
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 222/331 (67%), Positives = 268/331 (80%), Gaps = 1/331 (0%)
Query: 2 DEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTL 61
+EWP+I PLPSYGRGRERLG RHISLIHG+ L +V+ITG NGTIDGQG++WWDLWWNRTL
Sbjct: 152 EEWPLIAPLPSYGRGRERLGPRHISLIHGEGLDDVVITGNNGTIDGQGRIWWDLWWNRTL 211
Query: 62 KHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDP 121
HTRGHL+EL++S NI+ISN+T RNSPFWT+HPVYCRNVVI+ +T+LAPLNAPNTDGIDP
Sbjct: 212 NHTRGHLIELVDSTNIMISNITLRNSPFWTVHPVYCRNVVIRNLTVLAPLNAPNTDGIDP 271
Query: 122 DSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSE 181
DSS+ VCIEDCYIESGDDLVAVKSGWD YGI++ +PSSNII++RVSGTTPTCSGVG GSE
Sbjct: 272 DSSSEVCIEDCYIESGDDLVAVKSGWDQYGISVGKPSSNIIIQRVSGTTPTCSGVGFGSE 331
Query: 182 MSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDH 241
MSGGI NV + LHVW++A VRIKTD GRGGYI NITI N++ME+VK+PIR SRG++DH
Sbjct: 332 MSGGISNVIIRDLHVWNSAQAVRIKTDVGRGGYITNITIENVRMEKVKVPIRFSRGADDH 391
Query: 242 PDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQ 301
D+ +D ALPKI + +VV V+ +AP+L + G +E IC +NVSL + +W
Sbjct: 392 SDDKYDRSALPKISDVRIRDVVGVDLQRAPMLEAVHGAVYEGICFRNVSLTVIKRQDRWH 451
Query: 302 CQFVSGFTSQVFPLPCPQL-QNKSSSWCSFS 331
C+ V G V P PC + +N SSSWC S
Sbjct: 452 CESVYGEAHDVLPAPCEEFRRNGSSSWCGHS 482
>gi|357139453|ref|XP_003571296.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 485
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 221/335 (65%), Positives = 271/335 (80%), Gaps = 5/335 (1%)
Query: 2 DEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTL 61
+EWP+I PLPSYGRGRERLG RHISLIHG++L +V+ITG NGTIDGQG+MWW+LWWNRTL
Sbjct: 151 EEWPLIAPLPSYGRGRERLGPRHISLIHGENLDDVVITGSNGTIDGQGRMWWELWWNRTL 210
Query: 62 KHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDP 121
HTRGHL+EL+NS N++ISN+T RNSPFWT+HPVYCRNVVIK +TILAPLNAPNTDGIDP
Sbjct: 211 NHTRGHLIELVNSTNVMISNVTLRNSPFWTVHPVYCRNVVIKDLTILAPLNAPNTDGIDP 270
Query: 122 DSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSE 181
DSS++VCIEDCYIESGDDLVA+KSGWD YGI++ +PS+NII++RVSGTTPTCSGVGIGSE
Sbjct: 271 DSSSDVCIEDCYIESGDDLVAIKSGWDQYGISVNKPSTNIIIQRVSGTTPTCSGVGIGSE 330
Query: 182 MSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDH 241
MSGG+ V + LHVW++A+ VRIKTD GRGG++ N+T+ N+ MERVK+PIR SRGS+DH
Sbjct: 331 MSGGVSGVLIRDLHVWNSASAVRIKTDVGRGGFVTNVTVANVTMERVKVPIRFSRGSDDH 390
Query: 242 PDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPS---- 297
D+ +D ALP I + V++V V+ +AP+L + G +E IC +NVSL
Sbjct: 391 SDDKYDRTALPTISDVRIVDIVGVDVQRAPILEAVHGAVYEGICFRNVSLRLREEVRRRH 450
Query: 298 AKWQCQFVSGFTSQVFPLPCPQLQ-NKSSSWCSFS 331
A WQC+ V G VFP C +L+ N SSSWC S
Sbjct: 451 AGWQCESVYGEAHGVFPEACEELRHNGSSSWCGLS 485
>gi|226491354|ref|NP_001148255.1| polygalacturonase [Zea mays]
gi|195616976|gb|ACG30318.1| polygalacturonase [Zea mays]
gi|219888097|gb|ACL54423.1| unknown [Zea mays]
gi|413941563|gb|AFW74212.1| polygalacturonase [Zea mays]
Length = 493
Score = 462 bits (1190), Expect = e-128, Method: Compositional matrix adjust.
Identities = 215/332 (64%), Positives = 264/332 (79%), Gaps = 3/332 (0%)
Query: 2 DEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTL 61
+EWP+I PLPSYGRGRERLG RHISLIHG+ L +V+ITG NGTIDGQG MWW+LW NRTL
Sbjct: 161 EEWPLITPLPSYGRGRERLGPRHISLIHGEGLNDVVITGSNGTIDGQGHMWWELWRNRTL 220
Query: 62 KHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDP 121
HTRGHL+EL+NS N+LIS++T NSPFWT+HPVYC NVV+K +TILAPL+APNTDGIDP
Sbjct: 221 NHTRGHLIELVNSTNVLISSVTLSNSPFWTVHPVYCSNVVMKDLTILAPLDAPNTDGIDP 280
Query: 122 DSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSE 181
DSS+ VCIEDCYIESGDDLVAVKSGWD YGI+ +PS+NI+++RVSGTTPTCSGVG GSE
Sbjct: 281 DSSSEVCIEDCYIESGDDLVAVKSGWDQYGISFGKPSTNIVIQRVSGTTPTCSGVGFGSE 340
Query: 182 MSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDH 241
MSGGI NV V LHVW++A VR+KTD GRGGYI NITI ++ ME+VK+PIR SRG++DH
Sbjct: 341 MSGGISNVLVRDLHVWNSAQAVRLKTDVGRGGYITNITIASVAMEKVKVPIRFSRGADDH 400
Query: 242 PDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGL--APSAK 299
PD+ +DP ALP+I + +VV V+ +AP+L + G +E IC +N S G+ ++
Sbjct: 401 PDDRYDPAALPRISNVLVSDVVGVHLQRAPMLEAVPGAVYEGICFRNFSFRGIRRQQDSR 460
Query: 300 WQCQFVSGFTSQVFPLPCPQL-QNKSSSWCSF 330
W C+ V G VFP PC + ++ SSSWC
Sbjct: 461 WHCESVYGEAHDVFPAPCEEFRRDGSSSWCGL 492
>gi|326516252|dbj|BAJ88149.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 297
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 198/291 (68%), Positives = 237/291 (81%), Gaps = 2/291 (0%)
Query: 42 NGTIDGQGQMWWDLWWNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVV 101
NGTIDGQG+MWW+LWWNRTL HTRGHL+EL+NS N+LISN+T RNSPFWT+HPVYCRNVV
Sbjct: 6 NGTIDGQGRMWWELWWNRTLNHTRGHLIELVNSTNVLISNVTLRNSPFWTVHPVYCRNVV 65
Query: 102 IKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNI 161
IK +TILAPLNAPNTDGIDPDSS+ VCIEDCYIESGDDLVAVKSGWD YGI++ +PSSNI
Sbjct: 66 IKDLTILAPLNAPNTDGIDPDSSSEVCIEDCYIESGDDLVAVKSGWDQYGISVGKPSSNI 125
Query: 162 IVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIR 221
I++RVSGTTPTCSGVG GSEMSGGI NV V LH+W++A+ VR+KTD GRGGYI NITI
Sbjct: 126 IIQRVSGTTPTCSGVGFGSEMSGGISNVLVRDLHIWNSASAVRLKTDVGRGGYITNITIA 185
Query: 222 NIKMERVKIPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQF 281
N+ ME+VK+PIR SRGS+DH D+ +D ALP I GI V++V V+ +AP+L + G +
Sbjct: 186 NVTMEKVKVPIRFSRGSDDHSDDKYDRTALPMISGIHIVDIVGVDVQRAPMLEAVHGAVY 245
Query: 282 EEICMKNVSLLGLAPSAKWQCQFVSGFTSQVFPLPCPQLQN--KSSSWCSF 330
E IC +NVSL + +WQC+ V G +VFP PC +L+N SSSWC
Sbjct: 246 EGICFRNVSLRAIRRQVRWQCESVYGEAHEVFPAPCEELRNNGSSSSWCGL 296
>gi|357511567|ref|XP_003626072.1| Polygalacturonase [Medicago truncatula]
gi|355501087|gb|AES82290.1| Polygalacturonase [Medicago truncatula]
Length = 466
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 177/322 (54%), Positives = 235/322 (72%), Gaps = 1/322 (0%)
Query: 2 DEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTL 61
++WP++DPLPSYGRGRE GGRH SLI+G +LT+VIITG G IDGQG +WW ++ N+TL
Sbjct: 115 EDWPVVDPLPSYGRGRELPGGRHRSLIYGCNLTDVIITGNEGIIDGQGSIWWSMFRNKTL 174
Query: 62 KHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDP 121
+TR HLVELMNS +LISNLTF NSPFWTIHPVYC V ++ +TILAPL++PNTDGIDP
Sbjct: 175 DYTRPHLVELMNSTRVLISNLTFLNSPFWTIHPVYCSQVTVQNVTILAPLDSPNTDGIDP 234
Query: 122 DSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSE 181
DSS +VCIEDCYI +GDDL+A+KSGWD YGIA RPS+NI++ R+ G T T +G+ IGSE
Sbjct: 235 DSSDDVCIEDCYISTGDDLIAIKSGWDEYGIAFGRPSTNIVIHRLVGKTHTSAGIAIGSE 294
Query: 182 MSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDH 241
MSGG+ +V + +H +D+ +RIKT GRGGY+ NI + N+ + V I IR + DH
Sbjct: 295 MSGGVSDVRAEDIHFYDSYTAIRIKTSPGRGGYVRNIYVTNMTLANVDIAIRFTGSYGDH 354
Query: 242 PDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQ 301
PD+ +DP ALP I I+ +V+ N TKA ++ GI G F IC+ N++ L ++ + W
Sbjct: 355 PDDAYDPNALPVIEKITIEDVIGENITKAGLIEGIEGDNFVNICLSNIT-LNVSSNYPWN 413
Query: 302 CQFVSGFTSQVFPLPCPQLQNK 323
C + G++ VFP C L+ +
Sbjct: 414 CSNIRGYSDMVFPEACEPLKER 435
>gi|297817560|ref|XP_002876663.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297322501|gb|EFH52922.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 471
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/323 (56%), Positives = 236/323 (73%), Gaps = 3/323 (0%)
Query: 2 DEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTL 61
+ WP++DPLPSYGRGRE G RH SLI+G +LT+V+ITG NGTIDGQG +WWD + N L
Sbjct: 115 ENWPVVDPLPSYGRGRELPGRRHRSLIYGQNLTDVVITGENGTIDGQGSVWWDWFRNGEL 174
Query: 62 KHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDP 121
+TR HLVELMNS ++ISNLTF NSPFW IHPVYCR+VV+K +TILAPL +PNTDG+DP
Sbjct: 175 NYTRPHLVELMNSTGLIISNLTFLNSPFWNIHPVYCRDVVVKNLTILAPLESPNTDGVDP 234
Query: 122 DSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSE 181
DSSTNVCIEDCYI +GDDLV++KSGWD YGI+ ARPSS I + R++G T + SG+ IGSE
Sbjct: 235 DSSTNVCIEDCYIVTGDDLVSIKSGWDEYGISYARPSSKIKINRLTGQTTSSSGIAIGSE 294
Query: 182 MSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDH 241
MSGG+ + + LH++++ G+RIKT GRGGY+ N+ I N+K++ VK IR + +H
Sbjct: 295 MSGGVSEIYIKDLHLFNSNTGIRIKTSPGRGGYVRNVHILNVKLDNVKKAIRFTGKYGEH 354
Query: 242 PDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAK-- 299
PDE +DPKALP I I+F NV A +L GI G +F+ IC NV+L S K
Sbjct: 355 PDEKFDPKALPAIEKITFENVNGDGIGVAGLLEGIAGDEFKNICFLNVTLRVKKNSKKSP 414
Query: 300 WQCQFVSGFTSQVFP-LPCPQLQ 321
W+C V G++ V P + C L+
Sbjct: 415 WECSNVRGYSQWVSPEITCDSLK 437
>gi|18412253|ref|NP_567126.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|11762132|gb|AAG40344.1|AF324992_1 AT3g62110 [Arabidopsis thaliana]
gi|23397166|gb|AAN31866.1| unknown protein [Arabidopsis thaliana]
gi|332646790|gb|AEE80311.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 471
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/323 (56%), Positives = 235/323 (72%), Gaps = 3/323 (0%)
Query: 2 DEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTL 61
+ WP++DPLPSYGRGRE G RH SLI+G +LT+V+ITG NGTIDGQG +WWD + N L
Sbjct: 115 ENWPVVDPLPSYGRGRELPGRRHRSLIYGQNLTDVVITGENGTIDGQGTVWWDWFRNGEL 174
Query: 62 KHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDP 121
+TR HLVELMNS ++ISNLTF NSPFW IHPVYCR+VV+K +TILAPL +PNTDG+DP
Sbjct: 175 NYTRPHLVELMNSTGLIISNLTFLNSPFWNIHPVYCRDVVVKNLTILAPLESPNTDGVDP 234
Query: 122 DSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSE 181
DSSTNVCIEDCYI +GDDLV++KSGWD YGI+ ARPSS I + R++G T + SG+ IGSE
Sbjct: 235 DSSTNVCIEDCYIVTGDDLVSIKSGWDEYGISYARPSSKIKINRLTGQTTSSSGIAIGSE 294
Query: 182 MSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDH 241
MSGG+ + + LH++++ G+RIKT GRGGY+ N+ I N+K++ VK IR + +H
Sbjct: 295 MSGGVSEIYIKDLHLFNSNTGIRIKTSAGRGGYVRNVHILNVKLDNVKKAIRFTGKYGEH 354
Query: 242 PDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAK-- 299
PDE +DPKALP I I+F NV A +L GI G F+ IC NV+L S K
Sbjct: 355 PDEKYDPKALPAIEKITFENVNGDGIGVAGLLEGIEGDVFKNICFLNVTLRVKKNSKKSP 414
Query: 300 WQCQFVSGFTSQVFP-LPCPQLQ 321
W+C V G++ V P + C L+
Sbjct: 415 WECSNVRGYSQWVSPEITCDSLK 437
>gi|6899921|emb|CAB71871.1| putative protein [Arabidopsis thaliana]
Length = 470
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/321 (57%), Positives = 234/321 (72%), Gaps = 3/321 (0%)
Query: 4 WPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKH 63
WP++DPLPSYGRGRE G RH SLI+G +LT+V+ITG NGTIDGQG +WWD + N L +
Sbjct: 116 WPVVDPLPSYGRGRELPGRRHRSLIYGQNLTDVVITGENGTIDGQGTVWWDWFRNGELNY 175
Query: 64 TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDS 123
TR HLVELMNS ++ISNLTF NSPFW IHPVYCR+VV+K +TILAPL +PNTDG+DPDS
Sbjct: 176 TRPHLVELMNSTGLIISNLTFLNSPFWNIHPVYCRDVVVKNLTILAPLESPNTDGVDPDS 235
Query: 124 STNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMS 183
STNVCIEDCYI +GDDLV++KSGWD YGI+ ARPSS I + R++G T + SG+ IGSEMS
Sbjct: 236 STNVCIEDCYIVTGDDLVSIKSGWDEYGISYARPSSKIKINRLTGQTTSSSGIAIGSEMS 295
Query: 184 GGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPD 243
GG+ + + LH++++ G+RIKT GRGGY+ N+ I N+K++ VK IR + +HPD
Sbjct: 296 GGVSEIYIKDLHLFNSNTGIRIKTSAGRGGYVRNVHILNVKLDNVKKAIRFTGKYGEHPD 355
Query: 244 EGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAK--WQ 301
E +DPKALP I I+F NV A +L GI G F+ IC NV+L S K W+
Sbjct: 356 EKYDPKALPAIEKITFENVNGDGIGVAGLLEGIEGDVFKNICFLNVTLRVKKNSKKSPWE 415
Query: 302 CQFVSGFTSQVFP-LPCPQLQ 321
C V G++ V P + C L+
Sbjct: 416 CSNVRGYSQWVSPEITCDSLK 436
>gi|357135554|ref|XP_003569374.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 448
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 177/330 (53%), Positives = 239/330 (72%), Gaps = 2/330 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
WP+IDPLPSYGRGRE G R+ SLIHG+ L +V ITG NGTIDGQG +WWD+W TL
Sbjct: 119 SWPLIDPLPSYGRGREMPGKRYKSLIHGNGLQDVFITGANGTIDGQGSVWWDMWKKGTLP 178
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
TR HL+ELM+S+++++SNL FR+SPFW IHPVYC NVVI+ +TILAP ++PNTDGIDPD
Sbjct: 179 FTRPHLLELMDSSDVIVSNLVFRDSPFWNIHPVYCSNVVIRNLTILAPHDSPNTDGIDPD 238
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SS+NVCIEDCYI +GDDLVA+KSGWD YGIA RPSS+I VRR++G++P +G +GSE
Sbjct: 239 SSSNVCIEDCYISTGDDLVAIKSGWDEYGIAYGRPSSDITVRRITGSSP-FAGFAVGSET 297
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGG+ NV + L+ + + GV IKT+ GRGG+I N+T+ ++ ++ V+ +RI+ DHP
Sbjct: 298 SGGVENVLAEHLNFFSSGFGVHIKTNSGRGGFIRNVTVSDVTLDNVRYGLRIAGDVGDHP 357
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQC 302
DE ++ ALPK+ ++ NV N +A + GI + F IC+ N+ L G P W+C
Sbjct: 358 DEHYNHNALPKVDSLTIKNVQGQNIKEAGSIKGIASSAFSRICLSNIKLHGSVPVRPWKC 417
Query: 303 QFVSGFTSQVFPLPCPQLQNKS-SSWCSFS 331
+ VSG + P PC +L + S +S+C+ S
Sbjct: 418 ESVSGGALDLQPSPCTELTSTSGTSFCTNS 447
>gi|297816204|ref|XP_002875985.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297321823|gb|EFH52244.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 471
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/323 (56%), Positives = 235/323 (72%), Gaps = 3/323 (0%)
Query: 2 DEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTL 61
+ WP++DPLPSYGRGRE G RH SLI+G +LT+V+ITG NGTIDGQG +WWD + N L
Sbjct: 115 ENWPVVDPLPSYGRGRELPGRRHRSLIYGQNLTDVVITGENGTIDGQGSVWWDWFRNGEL 174
Query: 62 KHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDP 121
+TR HLVELMNS ++ISNLTF NSPFW IHPVYCR+VV+K +TILAPL +PNTDG+DP
Sbjct: 175 NYTRPHLVELMNSTGLIISNLTFLNSPFWNIHPVYCRDVVVKNLTILAPLESPNTDGVDP 234
Query: 122 DSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSE 181
DSSTNVCIEDCYI + DDLV++K+GWD YGI+ ARPSS I + R++G T + SG+ IGSE
Sbjct: 235 DSSTNVCIEDCYIVTRDDLVSIKTGWDEYGISYARPSSKIKINRLTGQTTSSSGIAIGSE 294
Query: 182 MSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDH 241
MSGG+ + + LH++++ G+RIKT GRGGY+ N+ I N+K++ VK IR + +H
Sbjct: 295 MSGGVSEIYIKDLHLFNSNTGIRIKTSPGRGGYVRNVHILNVKLDNVKKAIRFTGKYGEH 354
Query: 242 PDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAK-- 299
PD+ +DPKALP I I+F NV A +L GI G +F+ IC NV+L S K
Sbjct: 355 PDKNFDPKALPAIEKITFENVNGDGIGVAGLLEGIEGDEFKNICFLNVTLRVKKNSKKSP 414
Query: 300 WQCQFVSGFTSQVFP-LPCPQLQ 321
W+C V G++ V P + C L+
Sbjct: 415 WECSNVRGYSQWVSPGITCDSLK 437
>gi|356572848|ref|XP_003554577.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 467
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 177/322 (54%), Positives = 230/322 (71%), Gaps = 2/322 (0%)
Query: 2 DEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTL 61
++WP++DPLPSYGRGRE GGRH SLI+G +LT+VIITG NGTIDGQG +WW+ + NRTL
Sbjct: 115 EDWPVVDPLPSYGRGRELPGGRHKSLIYGHNLTDVIITGNNGTIDGQGSIWWNRFMNRTL 174
Query: 62 KHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDP 121
+TR HLVELMNS +LISNLTF NSPFWTIHPVYC V ++ + ILAP ++PNTDGIDP
Sbjct: 175 DYTRPHLVELMNSTGVLISNLTFLNSPFWTIHPVYCSQVTVQNVRILAPHDSPNTDGIDP 234
Query: 122 DSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSE 181
DSS NVCIEDCYI +GDDL+A+KSGWD YGIA RPS+NII+ R+ G T T SG+ IGSE
Sbjct: 235 DSSDNVCIEDCYISTGDDLIAIKSGWDEYGIAYGRPSTNIIIHRLVGKTQT-SGIAIGSE 293
Query: 182 MSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDH 241
MSGG+ V + + +D+ G+RIKT GRGGY+ NI + N+ + V I I + +H
Sbjct: 294 MSGGVSEVHAEDIQFYDSYNGIRIKTSPGRGGYVRNIYVSNVSLANVDIAIWFTGSYGEH 353
Query: 242 PDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQ 301
PD+ +DP ALP I ++ +VV N A ++ GI G F IC+ N+ +L + + W
Sbjct: 354 PDDAYDPNALPVIEKVTIKDVVGENIKTAGLIEGIEGDNFVNICLSNI-ILNVTSNYPWN 412
Query: 302 CQFVSGFTSQVFPLPCPQLQNK 323
C +V G++ V P C L+ +
Sbjct: 413 CSYVKGYSDLVQPEACEPLKER 434
>gi|359807069|ref|NP_001241086.1| uncharacterized protein LOC100817309 precursor [Glycine max]
gi|255636991|gb|ACU18828.1| unknown [Glycine max]
Length = 467
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 176/322 (54%), Positives = 230/322 (71%), Gaps = 2/322 (0%)
Query: 2 DEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTL 61
++WP++DPLPSYGRGRE GGRH SLI+G +LT+VIITG NGTIDGQG +WW+ +WNR+L
Sbjct: 115 EDWPVVDPLPSYGRGRELPGGRHKSLIYGHNLTDVIITGNNGTIDGQGSIWWNRFWNRSL 174
Query: 62 KHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDP 121
+TR HLVELMNS +LISNLTF NSPFWTIHPVYC V ++ + ILAP ++PNTDGIDP
Sbjct: 175 DYTRPHLVELMNSTGVLISNLTFLNSPFWTIHPVYCSQVTVQNVRILAPHDSPNTDGIDP 234
Query: 122 DSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSE 181
DSS NVCIEDCYI +GDDL+A+KSGWD YGIA RPS+NII+ R+ G T T SG+ IGSE
Sbjct: 235 DSSDNVCIEDCYISTGDDLIAIKSGWDEYGIAYGRPSTNIIIHRLVGRTQT-SGIAIGSE 293
Query: 182 MSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDH 241
MSGG+ V + + +D+ +RIKT GRGGY+ NI + N+ + V I I + +H
Sbjct: 294 MSGGVSEVHAEDIQFYDSYNAIRIKTSPGRGGYVRNIYVSNVTLANVDIAITFTGLYGEH 353
Query: 242 PDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQ 301
PD+ ++P ALP I I+ +VV N A ++ GI G F IC+ N+ +L + + W
Sbjct: 354 PDDAYNPNALPVIEKITIKDVVGENIKTAGLIEGIEGDNFVNICLSNI-ILNVTSNYPWN 412
Query: 302 CQFVSGFTSQVFPLPCPQLQNK 323
C +V G++ V P C L+ +
Sbjct: 413 CSYVKGYSDLVQPEACEPLKER 434
>gi|356501839|ref|XP_003519731.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 472
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 174/322 (54%), Positives = 237/322 (73%), Gaps = 2/322 (0%)
Query: 2 DEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTL 61
D+WP++DPLPSYGRGRE GGRH SLI+G +LT+V+ITG NGTIDGQG +WW+ +WN+TL
Sbjct: 123 DDWPVVDPLPSYGRGRELPGGRHRSLIYGCNLTDVVITGNNGTIDGQGSIWWNNFWNKTL 182
Query: 62 KHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDP 121
+TR HLVELMNS +LISN+TF NSPFWTIHPVYC +V I+ +TI+APL++PNTDGI+P
Sbjct: 183 NYTRPHLVELMNSTGVLISNVTFLNSPFWTIHPVYCSHVTIQNVTIIAPLSSPNTDGINP 242
Query: 122 DSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSE 181
DSS NVCIEDCYI +GDDL+++KSGWD YGI+ RPS+NI +RR+ G T T +G+ IGSE
Sbjct: 243 DSSDNVCIEDCYISTGDDLISIKSGWDGYGISFGRPSTNINIRRLIGKT-TSAGIAIGSE 301
Query: 182 MSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDH 241
MSGG+ V + ++++D+ + +RIKT GRGGY+ N+ I N+ + V I IR + +H
Sbjct: 302 MSGGVSEVHAEDIYIFDSHSAIRIKTSPGRGGYVRNVYISNMILANVDIAIRFTGLYGEH 361
Query: 242 PDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQ 301
PD+ +DP ALP I I+ +V+ V A ++ GI G F IC+ N++ L ++ W
Sbjct: 362 PDDTYDPDALPVIERITIKDVIGVKVKHAGLIQGIKGDNFVNICLSNIT-LNVSSKLPWN 420
Query: 302 CQFVSGFTSQVFPLPCPQLQNK 323
C ++ GF+ V P C L+ +
Sbjct: 421 CSYIKGFSDLVSPEACEPLKER 442
>gi|326496364|dbj|BAJ94644.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326509249|dbj|BAJ91541.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510305|dbj|BAJ87369.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518514|dbj|BAJ88286.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 450
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 178/330 (53%), Positives = 237/330 (71%), Gaps = 2/330 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
WP+IDPLPSYGRGRE G R+ISLIHG+ L +V ITG NGTIDGQG +WWD+W TL
Sbjct: 121 SWPLIDPLPSYGRGRELPGKRYISLIHGNGLQDVFITGENGTIDGQGSVWWDMWKKGTLP 180
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
TR HL+ELM+S+N ++SNL F++SPFW IHPVYC NVVI+ +TILAP ++PNTDGIDPD
Sbjct: 181 FTRPHLLELMDSSNAIVSNLVFQDSPFWNIHPVYCSNVVIRNLTILAPHDSPNTDGIDPD 240
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SS+NVCIEDCYI +GDDL+A+KSGWD YGIA RPSS+I +RR++G++P +G +GSE
Sbjct: 241 SSSNVCIEDCYISTGDDLIAIKSGWDEYGIAYGRPSSDITIRRITGSSP-FAGFSVGSET 299
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGG+ NV + L+ + + GV IKT+ GRGG+I NIT+ ++ ++ V+ +RI+ HP
Sbjct: 300 SGGVENVLAEHLNFYSSGFGVHIKTNSGRGGFIRNITVSDVILDNVRYGLRIAGDVGGHP 359
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQC 302
DE ++ ALP + + NV N +A ++ GI + F IC+ N+ L G AP W+C
Sbjct: 360 DERYNHNALPIVDSLMIKNVQGQNIKEAGLIKGIPNSAFSRICLSNIKLHGSAPVRPWKC 419
Query: 303 QFVSGFTSQVFPLPCPQLQNKSS-SWCSFS 331
Q VSG V P PC +L + S S+C+ S
Sbjct: 420 QAVSGGALDVQPSPCTELTSMSGMSFCTNS 449
>gi|326488219|dbj|BAJ89948.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 450
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 178/330 (53%), Positives = 237/330 (71%), Gaps = 2/330 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
WP+IDPLPSYGRGRE G R+ISLIHG+ L +V ITG NGTIDGQG +WWD+W TL
Sbjct: 121 SWPLIDPLPSYGRGRELPGKRYISLIHGNGLQDVFITGENGTIDGQGSVWWDMWKKGTLP 180
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
TR HL+ELM+S+N ++SNL F++SPFW IHPVYC NVVI+ +TILAP ++PNTDGIDPD
Sbjct: 181 FTRPHLLELMDSSNAIVSNLVFQDSPFWNIHPVYCSNVVIRNLTILAPHDSPNTDGIDPD 240
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SS+NVCIEDCYI +GDDL+A+KSGWD YGIA RPSS+I +RR++G++P +G +GSE
Sbjct: 241 SSSNVCIEDCYISTGDDLIAIKSGWDEYGIAYGRPSSDITIRRITGSSP-FAGFSVGSET 299
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGG+ NV + L+ + + GV IKT+ GRGG+I NIT+ ++ ++ V+ +RI+ HP
Sbjct: 300 SGGVENVLAEHLNFYSSGFGVHIKTNSGRGGFIRNITVSDVILDNVRYGLRIAGDVGGHP 359
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQC 302
DE ++ ALP + + NV N +A ++ GI + F IC+ N+ L G AP W+C
Sbjct: 360 DERYNHNALPIVDSLMIKNVQGQNIKEAGLIKGIPNSAFSRICLSNIKLHGSAPVRPWKC 419
Query: 303 QFVSGFTSQVFPLPCPQLQNKSS-SWCSFS 331
Q VSG V P PC +L + S S+C+ S
Sbjct: 420 QAVSGGALDVQPSPCTELTSMSGMSFCTNS 449
>gi|15236625|ref|NP_194113.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|4454051|emb|CAA23048.1| putative polygalacturonase [Arabidopsis thaliana]
gi|7269231|emb|CAB81300.1| putative polygalacturonase [Arabidopsis thaliana]
gi|17065242|gb|AAL32775.1| putative polygalacturonase [Arabidopsis thaliana]
gi|22136230|gb|AAM91193.1| putative polygalacturonase [Arabidopsis thaliana]
gi|332659410|gb|AEE84810.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 444
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/328 (55%), Positives = 240/328 (73%), Gaps = 3/328 (0%)
Query: 4 WPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKH 63
WP+IDPLPSYGRGRE GGR++S IHGD L +V+ITG NGTIDGQG++WW++W +RTLK+
Sbjct: 115 WPLIDPLPSYGRGRELPGGRYMSFIHGDGLRDVVITGQNGTIDGQGEVWWNMWRSRTLKY 174
Query: 64 TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDS 123
TR +L+E +S I+ISN+ F+NSPFW IHPVYC NVVI +TILAP ++PNTDGIDPDS
Sbjct: 175 TRPNLIEFKDSKEIIISNVIFQNSPFWNIHPVYCSNVVIHHVTILAPQDSPNTDGIDPDS 234
Query: 124 STNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMS 183
S NVCIED YI +GDDLVA+KSGWD YGIA RPSSNI +RR++G++P +G+ IGSE S
Sbjct: 235 SYNVCIEDSYISTGDDLVAIKSGWDQYGIAYGRPSSNITIRRITGSSP-FAGIAIGSETS 293
Query: 184 GGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPD 243
GGI N+ + + + + GV IKT+ GRGGYI+NI I ++ ++ K I+I+ + DHPD
Sbjct: 294 GGIKNIIAEHITLSNMGVGVNIKTNIGRGGYIKNIKISDVYVDTAKYGIKIAGDTGDHPD 353
Query: 244 EGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAK-WQC 302
E ++P ALP ++GI NV VN A + G+ G+ F IC+ ++L G S K W+C
Sbjct: 354 ENYNPNALPVVKGIHIKNVWGVNVRNAGSIQGLKGSPFTGICLSEINLHGSLNSYKTWKC 413
Query: 303 QFVSGFTSQVFPLPCPQLQNK-SSSWCS 329
VSG + +V P PC +L+ S+ CS
Sbjct: 414 SDVSGTSLKVSPWPCSELRTTGGSNLCS 441
>gi|242053639|ref|XP_002455965.1| hypothetical protein SORBIDRAFT_03g028140 [Sorghum bicolor]
gi|241927940|gb|EES01085.1| hypothetical protein SORBIDRAFT_03g028140 [Sorghum bicolor]
Length = 447
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 174/330 (52%), Positives = 240/330 (72%), Gaps = 2/330 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
WP+I+PLPSYGRGRE GGR+ISLIHG L +V+ITG NGTIDGQG WWD+W TL
Sbjct: 118 SWPLIEPLPSYGRGRELPGGRYISLIHGSGLQDVVITGENGTIDGQGTPWWDMWKKGTLL 177
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+TR HL+ELM+S++I++SN+ F++SPFW IHPVYC NVVI+ +TILAP ++PNTDGIDPD
Sbjct: 178 YTRPHLLELMSSSHIIVSNVVFQDSPFWNIHPVYCSNVVIRNVTILAPHDSPNTDGIDPD 237
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SS+N+CIEDCYI +GDD +A+KSGWD YGIA RPSS+I VRR++G++P +G +GSE
Sbjct: 238 SSSNICIEDCYISTGDDAIAIKSGWDEYGIAYGRPSSDITVRRITGSSP-FAGFAVGSET 296
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGG+ NV + L+ + + G+ IKT+ GRGG+I N+T+ ++ ++ V+ +RI +HP
Sbjct: 297 SGGVENVLAEHLNFFSSGFGIHIKTNTGRGGFIRNVTVSDVTLDNVRYGLRIVGDVGNHP 356
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQC 302
DE ++ ALP + ++ NV N +A ++ GI + F IC+ NV L G AP W+C
Sbjct: 357 DERYNRSALPIVDALTIKNVQGQNIKEAGLIKGIANSAFSRICLSNVKLTGGAPVQPWKC 416
Query: 303 QFVSGFTSQVFPLPCPQLQNKS-SSWCSFS 331
+ VSG V P PC +L + S +S+C+ S
Sbjct: 417 EAVSGGALDVQPSPCTELTSTSGTSFCTNS 446
>gi|357442057|ref|XP_003591306.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355480354|gb|AES61557.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 601
Score = 369 bits (947), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 173/322 (53%), Positives = 233/322 (72%), Gaps = 2/322 (0%)
Query: 2 DEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTL 61
++WP++DPLPSYGRGRE GGRH SLI+G +LT+VIITG NGTIDGQG +WW + N+TL
Sbjct: 245 EDWPVVDPLPSYGRGRELPGGRHRSLIYGCNLTDVIITGNNGTIDGQGSIWWSKFRNKTL 304
Query: 62 KHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDP 121
HTR HLVEL+NS +LISN TF NSPFWTIHPVYC NV ++ +TI+ P +PNTDGIDP
Sbjct: 305 DHTRPHLVELINSTEVLISNATFLNSPFWTIHPVYCSNVTVQNVTIIVPFGSPNTDGIDP 364
Query: 122 DSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSE 181
DSS NVCIEDCYI +GDDL+++KSGWD YGI+ RPS+NI + R++G T T +G+ IGSE
Sbjct: 365 DSSDNVCIEDCYISTGDDLISIKSGWDEYGISFGRPSTNISIHRLTGRT-TSAGIAIGSE 423
Query: 182 MSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDH 241
MSGG+ V + ++++D+ + +RIKT GRGGY+ N+ I N+ + V I IR + +H
Sbjct: 424 MSGGVSEVYAEDIYIFDSKSAIRIKTSPGRGGYVRNVYISNMTLINVDIAIRFTGLYGEH 483
Query: 242 PDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQ 301
PD+ +D ALP I I+ VNV+ N +A ++ GI G F +IC+ N++ L ++ + W
Sbjct: 484 PDDSYDRDALPVIERITVVNVIGENIKRAGLIQGIKGDNFVDICLSNIT-LNVSKNNPWN 542
Query: 302 CQFVSGFTSQVFPLPCPQLQNK 323
C V G++ V P C QL +
Sbjct: 543 CSDVKGYSELVSPESCEQLNER 564
>gi|297799608|ref|XP_002867688.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297313524|gb|EFH43947.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 444
Score = 369 bits (947), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 180/328 (54%), Positives = 239/328 (72%), Gaps = 3/328 (0%)
Query: 4 WPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKH 63
WP+IDPLPSYGRGRE GGR++S IHGD L +V+ITG NGTIDGQG++WW++W +RTLK+
Sbjct: 115 WPLIDPLPSYGRGRELPGGRYMSFIHGDGLRDVVITGQNGTIDGQGEVWWNMWRSRTLKY 174
Query: 64 TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDS 123
TR +L+E +S I+ISN+ F+NSPFW IHPVYC NVVI +TILAP ++PNTDGIDPDS
Sbjct: 175 TRPNLIEFKDSKEIIISNVIFQNSPFWNIHPVYCSNVVIHHVTILAPQDSPNTDGIDPDS 234
Query: 124 STNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMS 183
S NVCIED YI +GDDLVA+KSGWD YGIA RPSSNI +RR++G++P +G+ IGSE S
Sbjct: 235 SYNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPSSNITIRRITGSSP-FAGIAIGSETS 293
Query: 184 GGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPD 243
GGI N+ + + + + GV IKT+ GRGGYI+NI I ++ ++ K I+I+ + DHPD
Sbjct: 294 GGIKNIVAEHITLSNMGVGVNIKTNIGRGGYIKNIKISDVYIDTAKYGIKIAGDTGDHPD 353
Query: 244 EGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAK-WQC 302
E ++P ALP ++GI NV VN A + G+ G+ F IC+ ++L G S K W+C
Sbjct: 354 ENYNPNALPIVKGIHIKNVWGVNVRNAGSIQGLKGSPFTGICLSEINLHGSLNSYKTWKC 413
Query: 303 QFVSGFTSQVFPLPCPQLQNKSSSW-CS 329
V G + +V P PC +L+ S+ CS
Sbjct: 414 SDVIGTSLKVSPWPCSELRTTGGSYSCS 441
>gi|226504332|ref|NP_001141464.1| uncharacterized protein LOC100273574 precursor [Zea mays]
gi|194704686|gb|ACF86427.1| unknown [Zea mays]
gi|223949711|gb|ACN28939.1| unknown [Zea mays]
gi|413950643|gb|AFW83292.1| hypothetical protein ZEAMMB73_881856 [Zea mays]
gi|413950644|gb|AFW83293.1| hypothetical protein ZEAMMB73_881856 [Zea mays]
Length = 446
Score = 369 bits (946), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 172/330 (52%), Positives = 240/330 (72%), Gaps = 2/330 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
WP+I+PLPSYGRGRE GGR+ SLIHG+ L +V+ITG NGTIDGQG WWD+W NRTL
Sbjct: 117 SWPLIEPLPSYGRGRELPGGRYTSLIHGNGLQDVVITGENGTIDGQGSAWWDMWKNRTLL 176
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+TR HL+ELM+S++I++SN+ F++SPFW IHPVYC NVVI+ +TILAP ++PNTDGIDPD
Sbjct: 177 YTRPHLLELMSSSDIIVSNVVFQDSPFWNIHPVYCSNVVIRNVTILAPHDSPNTDGIDPD 236
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SS+N+CIEDCYI +GDD +A+KSGWD YGIA R SS I VRR++G++P +G +GSE
Sbjct: 237 SSSNICIEDCYISTGDDSIAIKSGWDEYGIAYGRASSGITVRRITGSSP-FAGFAVGSET 295
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGG+ NV + L+ +++ G+ +KT+ GRGG+I NIT+ ++ ++ V+ +RI +HP
Sbjct: 296 SGGVENVLAEHLNFFNSGFGIHVKTNTGRGGFIRNITVSDVTLDNVRYGLRIVGDVGNHP 355
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQC 302
D+ ++ ALP + ++ NV N +A ++ GI + F IC+ NV G AP W+C
Sbjct: 356 DDSYNRSALPIVDALTVKNVQGQNVREAGLIKGIPNSAFSRICLSNVKFTGGAPVRPWKC 415
Query: 303 QFVSGFTSQVFPLPCPQLQNKS-SSWCSFS 331
+ VSG V P PC +L + S +S+C+ S
Sbjct: 416 EAVSGGALDVQPSPCTELTSTSGTSFCTNS 445
>gi|356533489|ref|XP_003535296.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 472
Score = 368 bits (945), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 172/322 (53%), Positives = 236/322 (73%), Gaps = 2/322 (0%)
Query: 2 DEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTL 61
D+WP++DPLPSYG GRE GGRH SLI+G +LT+V+ITG NGTIDGQG +WW+ +WN+TL
Sbjct: 123 DDWPVVDPLPSYGHGRELPGGRHRSLIYGRNLTDVVITGNNGTIDGQGSIWWNNFWNKTL 182
Query: 62 KHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDP 121
+TR HLVELMNS +LISN+TF NSPFWTIHPVYC +V I+ +TI+APL++PNTDGI+P
Sbjct: 183 NYTRPHLVELMNSTGVLISNVTFMNSPFWTIHPVYCSHVTIQNVTIIAPLSSPNTDGINP 242
Query: 122 DSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSE 181
DSS NVCIEDCYI +GDDL+++KSGWD YGI+ RPS+NI +RR+ G T T +G+ IGSE
Sbjct: 243 DSSDNVCIEDCYISTGDDLISIKSGWDGYGISFGRPSTNINIRRLIGKT-TSAGIAIGSE 301
Query: 182 MSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDH 241
MSGG+ V + ++++D+ + +RIKT GRGGY+ N+ I N+ + V I IR + +H
Sbjct: 302 MSGGVSEVHAEDIYIFDSHSAIRIKTSPGRGGYVRNVYISNMILVNVDIAIRFTGLYGEH 361
Query: 242 PDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQ 301
PD+ +DP ALP I I+ +V+ +A ++ GI G F IC+ N++ L ++ W
Sbjct: 362 PDDTYDPDALPVIERITIKDVIGEKVKRAGLIQGIKGDNFVNICLSNIT-LNVSKKLPWN 420
Query: 302 CQFVSGFTSQVFPLPCPQLQNK 323
C +V G++ V P C L+ +
Sbjct: 421 CSYVKGYSDLVSPEACEPLRER 442
>gi|222636745|gb|EEE66877.1| hypothetical protein OsJ_23693 [Oryza sativa Japonica Group]
Length = 506
Score = 367 bits (943), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 176/319 (55%), Positives = 230/319 (72%), Gaps = 1/319 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
+WP+IDPLPSYGRGRE G RH SLI G +LT+VIITG NGTIDGQG++WW+ + N TL
Sbjct: 146 DWPVIDPLPSYGRGRELPGKRHQSLIFGSNLTDVIITGANGTIDGQGELWWNWFHNHTLN 205
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+TR L+ELM S+ ++ISNLTF N+PFW IHPVYC V+++ +TILAP+++PNTDGIDPD
Sbjct: 206 YTRPPLLELMYSDRVVISNLTFMNAPFWNIHPVYCSQVLVQHLTILAPISSPNTDGIDPD 265
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SS+NVCIEDCYI +GDD+V +KSGWD YGI+ A PSSNI +R ++G T +G+ GSEM
Sbjct: 266 SSSNVCIEDCYIRNGDDIVVIKSGWDEYGISFAHPSSNISIRNITGQTRNSAGIAFGSEM 325
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI +V + L ++ G+RIKT GRGGY++NI I ++ M+ V I IRI+ +HP
Sbjct: 326 SGGISDVRAEGLRFINSVHGIRIKTAPGRGGYVKNIYIADVSMDNVSIAIRITGNYGEHP 385
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQC 302
D+ +D ALP I I+ NVV VN A +L GI G F IC+ NVSL + + W C
Sbjct: 386 DDNYDKNALPVISNITIKNVVGVNIGTAGMLLGIQGDIFSNICLSNVSLSSKS-ADPWNC 444
Query: 303 QFVSGFTSQVFPLPCPQLQ 321
+ GF++ V P C QL+
Sbjct: 445 SLIEGFSNSVAPEICEQLR 463
>gi|359480238|ref|XP_002273855.2| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
gi|297744085|emb|CBI37055.3| unnamed protein product [Vitis vinifera]
Length = 466
Score = 367 bits (943), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 174/322 (54%), Positives = 233/322 (72%), Gaps = 1/322 (0%)
Query: 2 DEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTL 61
++WP+IDPLPSYGRGRE G RH SLI+G +LT+VI+TG NGTIDGQG +WW+ + +TL
Sbjct: 115 NDWPVIDPLPSYGRGRELPGRRHRSLIYGCNLTDVIVTGDNGTIDGQGSIWWNWFQKKTL 174
Query: 62 KHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDP 121
+TR HLVE +NS ++ISN+TF NSPFWTIHPVYC V+I+ +TILAPL++PNTDGIDP
Sbjct: 175 NYTRPHLVEFINSTGVVISNVTFLNSPFWTIHPVYCSQVIIQNVTILAPLDSPNTDGIDP 234
Query: 122 DSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSE 181
DSS +VCIEDCYI +GDDL+A+KSGWD YGI+ ARPS+NII+RR+ G T + +G+ IGSE
Sbjct: 235 DSSNDVCIEDCYISTGDDLIAIKSGWDEYGISYARPSTNIIIRRLVGKTNSSAGIAIGSE 294
Query: 182 MSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDH 241
MSGG+ V + L +++ G+RIKT GRGGY+ NI I ++ + VKI IR + +H
Sbjct: 295 MSGGVSEVHAESLQFFNSKTGIRIKTSPGRGGYVRNIYISDMNLVDVKIAIRFTGQYGEH 354
Query: 242 PDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQ 301
PDE +DP ALP I I+ +V+ N A +L GI G F IC+ N++ L + + W
Sbjct: 355 PDEFYDPTALPIIENITVKDVMGENIKFAGLLEGIEGDNFVNICLSNIT-LNVTSESPWN 413
Query: 302 CQFVSGFTSQVFPLPCPQLQNK 323
C ++ G++ V P C L +
Sbjct: 414 CSYIHGYSDLVSPEACEPLGER 435
>gi|356524183|ref|XP_003530711.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 474
Score = 367 bits (943), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 172/331 (51%), Positives = 240/331 (72%), Gaps = 3/331 (0%)
Query: 1 MDEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRT 60
+ WP+I PLPSYGRGRE GGR++S IHGD L++V+ITG NGTIDGQG +WW++W RT
Sbjct: 144 LGNWPLIAPLPSYGRGRELPGGRYMSFIHGDGLSDVVITGENGTIDGQGDVWWNMWRQRT 203
Query: 61 LKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGID 120
L+ TR +LVE +NS +I+ISN+ F+NSPFW IHPVYC NVV++ +TILAP ++PNTDGID
Sbjct: 204 LQFTRPNLVEFVNSQDIIISNVIFKNSPFWNIHPVYCSNVVVRYVTILAPRDSPNTDGID 263
Query: 121 PDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGS 180
PDSS+NVCIED YI +GDDLVAVKSGWD YGIA RPS I +RR++G++P +G+ IGS
Sbjct: 264 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRPSYGITIRRLTGSSP-FAGIAIGS 322
Query: 181 EMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSND 240
E SGG+ NV + +++++ G+ IKT+ GRGG I+NIT+ ++ +E + I+I+
Sbjct: 323 ETSGGVENVLAEHINLFNMGVGIHIKTNSGRGGLIKNITVAHVYVENARQGIKIAGDVGG 382
Query: 241 HPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGL--APSA 298
HPDE ++P ALP ++GI+ NV V +A ++ G+ + F ++C+ N++ G+ S
Sbjct: 383 HPDEKFNPNALPVVKGITIKNVWGVRVNQAGLIHGLRNSPFTDVCLSNINFHGMRGPRSP 442
Query: 299 KWQCQFVSGFTSQVFPLPCPQLQNKSSSWCS 329
W+C V GF QV P PC QL ++ C+
Sbjct: 443 SWKCSDVFGFAHQVSPWPCSQLSSQEPGSCA 473
>gi|115471367|ref|NP_001059282.1| Os07g0245200 [Oryza sativa Japonica Group]
gi|34393209|dbj|BAC82923.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|113610818|dbj|BAF21196.1| Os07g0245200 [Oryza sativa Japonica Group]
Length = 446
Score = 367 bits (941), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 176/319 (55%), Positives = 230/319 (72%), Gaps = 1/319 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
+WP+IDPLPSYGRGRE G RH SLI G +LT+VIITG NGTIDGQG++WW+ + N TL
Sbjct: 86 DWPVIDPLPSYGRGRELPGKRHQSLIFGSNLTDVIITGANGTIDGQGELWWNWFHNHTLN 145
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+TR L+ELM S+ ++ISNLTF N+PFW IHPVYC V+++ +TILAP+++PNTDGIDPD
Sbjct: 146 YTRPPLLELMYSDRVVISNLTFMNAPFWNIHPVYCSQVLVQHLTILAPISSPNTDGIDPD 205
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SS+NVCIEDCYI +GDD+V +KSGWD YGI+ A PSSNI +R ++G T +G+ GSEM
Sbjct: 206 SSSNVCIEDCYIRNGDDIVVIKSGWDEYGISFAHPSSNISIRNITGQTRNSAGIAFGSEM 265
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI +V + L ++ G+RIKT GRGGY++NI I ++ M+ V I IRI+ +HP
Sbjct: 266 SGGISDVRAEGLRFINSVHGIRIKTAPGRGGYVKNIYIADVSMDNVSIAIRITGNYGEHP 325
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQC 302
D+ +D ALP I I+ NVV VN A +L GI G F IC+ NVSL + + W C
Sbjct: 326 DDNYDKNALPVISNITIKNVVGVNIGTAGMLLGIQGDIFSNICLSNVSLSSKS-ADPWNC 384
Query: 303 QFVSGFTSQVFPLPCPQLQ 321
+ GF++ V P C QL+
Sbjct: 385 SLIEGFSNSVAPEICEQLR 403
>gi|186701223|gb|ACC91250.1| glycoside hydrolase family 28 protein [Arabidopsis halleri]
Length = 444
Score = 367 bits (941), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 177/319 (55%), Positives = 235/319 (73%), Gaps = 2/319 (0%)
Query: 4 WPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKH 63
WP+IDPLPSYGRGRE GGR++S IHGD L +V+ITG NGTIDGQG++WW++W +RTLK+
Sbjct: 115 WPLIDPLPSYGRGRELPGGRYMSFIHGDGLRDVVITGQNGTIDGQGEVWWNMWHSRTLKY 174
Query: 64 TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDS 123
TR +L+E +S I+ISN+ F+NSPFW IHPVYC NVVI +TILAP ++PNTDGIDPDS
Sbjct: 175 TRPNLIEFKDSKEIIISNVIFQNSPFWNIHPVYCSNVVIHHVTILAPQDSPNTDGIDPDS 234
Query: 124 STNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMS 183
S NVCIED YI +GDDLVA+KSGWD YGIA RPSSNI +RR++G++P +G+ IGSE S
Sbjct: 235 SYNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPSSNITIRRITGSSP-FAGIAIGSETS 293
Query: 184 GGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPD 243
GGI N+ + + + + GV IKT+ GRGGYI+NI I ++ ++ K I+I+ + DHPD
Sbjct: 294 GGIKNIVAEHITLSNMGVGVNIKTNIGRGGYIKNIKISDVYIDTAKYGIKITGDTGDHPD 353
Query: 244 EGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAK-WQC 302
E ++P ALP ++GI NV VN A + G+ G+ F IC+ ++L G S K W+C
Sbjct: 354 ENYNPNALPIVKGIHIKNVWGVNVRNAGSIQGLKGSPFTGICLSEINLHGSLNSYKTWKC 413
Query: 303 QFVSGFTSQVFPLPCPQLQ 321
V G + +V P PC +L+
Sbjct: 414 SDVIGTSLKVSPWPCSELR 432
>gi|224130826|ref|XP_002320934.1| predicted protein [Populus trichocarpa]
gi|222861707|gb|EEE99249.1| predicted protein [Populus trichocarpa]
Length = 427
Score = 366 bits (940), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 175/320 (54%), Positives = 229/320 (71%), Gaps = 2/320 (0%)
Query: 2 DEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTL 61
D+WP+ID LPSYGRGRE G RH SLI+G +LT+VIITG NGTIDGQG +WW+ + N TL
Sbjct: 108 DDWPVIDSLPSYGRGRELPGRRHKSLIYGRNLTDVIITGDNGTIDGQGSIWWNWFRNETL 167
Query: 62 KHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDP 121
+TR HLVELMN+ ++ISNLTF NSPFWTIHPVYC V+++ +TILAPL++PNTDGIDP
Sbjct: 168 DYTRPHLVELMNTTGVVISNLTFLNSPFWTIHPVYCSQVIVQNVTILAPLDSPNTDGIDP 227
Query: 122 DSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSE 181
DSS +VCIEDCYI +GDD++A+KSGWD YG + ARPS NI +R + G T T +G+ IGSE
Sbjct: 228 DSSDDVCIEDCYISTGDDIIAIKSGWDEYGTSYARPSKNITIRGLVGQT-TSAGIAIGSE 286
Query: 182 MSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDH 241
MSGG+ V + L +++ G+RIKT GRGGY+ NI I N+ + VK IR + DH
Sbjct: 287 MSGGVSEVHAENLTFYNSTTGIRIKTAPGRGGYVRNIYISNMSLTDVKTAIRFTGQYGDH 346
Query: 242 PDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQ 301
PDE +DPKALP I I+ +V N A +L G+ G F +IC+ N++ L + + W
Sbjct: 347 PDESYDPKALPLIERITIDDVTGQNVKYAGLLEGLEGDTFLDICLSNIN-LSVTSKSPWN 405
Query: 302 CQFVSGFTSQVFPLPCPQLQ 321
C ++ G++ V P C L+
Sbjct: 406 CSYIQGYSEAVSPEICEPLR 425
>gi|302767254|ref|XP_002967047.1| hypothetical protein SELMODRAFT_408393 [Selaginella moellendorffii]
gi|300165038|gb|EFJ31646.1| hypothetical protein SELMODRAFT_408393 [Selaginella moellendorffii]
Length = 478
Score = 366 bits (940), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 175/321 (54%), Positives = 230/321 (71%), Gaps = 2/321 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
EWP+I LPSYGRGRE GGRHISLIHG ++ +V+ITG NGTIDGQG +WWD + N+TL
Sbjct: 135 EWPVIPALPSYGRGRELPGGRHISLIHGKNMVDVVITGANGTIDGQGSVWWDWFHNKTLD 194
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
TRGHLVEL++S +I ISN+TF+NSPFWTIHPVYC +V+I+ +TILAP APN DGIDPD
Sbjct: 195 FTRGHLVELIDSRHITISNVTFKNSPFWTIHPVYCSDVLIQDVTILAPPYAPNIDGIDPD 254
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SS+NVCI DCYI +GDDL+++KSGWD +GI PS+N+ + VSG +PT +G+ GSEM
Sbjct: 255 SSSNVCIRDCYISTGDDLISIKSGWDEHGINYGMPSTNVCIHNVSGQSPTSAGIAFGSEM 314
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI +V + + V ++ +G+RIKT GRGGYI NI+I ++++E V + + HP
Sbjct: 315 SGGISDVFIKSVRVANSRSGIRIKTGAGRGGYITNISISDLQLENVSVAFDFTALYGGHP 374
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQC 302
D+G+DP+ALP IRGIS +VV A +AG+ F ++C NVSL + W C
Sbjct: 375 DDGYDPRALPVIRGISIRDVVGHEIGWAGCMAGLEEAPFRDLCFANVSL--SVGAGAWNC 432
Query: 303 QFVSGFTSQVFPLPCPQLQNK 323
GF+ +V P PC +L K
Sbjct: 433 SNTYGFSERVVPSPCLELDRK 453
>gi|218199365|gb|EEC81792.1| hypothetical protein OsI_25505 [Oryza sativa Indica Group]
Length = 506
Score = 366 bits (940), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 176/319 (55%), Positives = 229/319 (71%), Gaps = 1/319 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
+WP+IDPLPSYGRGRE G RH SLI G +LT+VIITG NGTIDGQG++WW+ + N TL
Sbjct: 146 DWPVIDPLPSYGRGRELPGKRHQSLIFGSNLTDVIITGANGTIDGQGELWWNWFHNHTLN 205
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+TR L+ELM S+ ++ISNLTF N+PFW IHPVYC V+++ +TILAP+++PNTDGIDPD
Sbjct: 206 YTRPPLLELMYSDRVVISNLTFMNAPFWNIHPVYCSQVLVQHLTILAPISSPNTDGIDPD 265
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SS+NVCIEDCYI +GDD+V +KSGWD YGI+ A PSSNI +R ++G T +G+ GSEM
Sbjct: 266 SSSNVCIEDCYIRNGDDIVVIKSGWDEYGISFAHPSSNISIRNITGQTRNSAGIAFGSEM 325
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI +V + L ++ G+RIKT GRGGY++NI I ++ M+ V I IRI+ +HP
Sbjct: 326 SGGISDVRAEGLRFINSVHGIRIKTAPGRGGYVKNIYIADVSMDNVSIAIRITGNYGEHP 385
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQC 302
D+ +D LP I I+ NVV VN A +L GI G F IC+ NVSL + + W C
Sbjct: 386 DDNYDKNVLPVISNITIKNVVGVNIGTAGMLLGIQGDIFSNICLSNVSLSSKS-ADPWNC 444
Query: 303 QFVSGFTSQVFPLPCPQLQ 321
V GF++ V P C QL+
Sbjct: 445 SLVKGFSNSVAPEICEQLR 463
>gi|224064770|ref|XP_002301554.1| predicted protein [Populus trichocarpa]
gi|222843280|gb|EEE80827.1| predicted protein [Populus trichocarpa]
Length = 458
Score = 366 bits (940), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 172/322 (53%), Positives = 230/322 (71%), Gaps = 2/322 (0%)
Query: 2 DEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTL 61
D+WP+IDPLPSYGRGRE G RH SLI+G +LT+VIITG NGTIDGQG +WWD + N+TL
Sbjct: 115 DDWPVIDPLPSYGRGRELPGRRHKSLIYGRNLTDVIITGDNGTIDGQGSIWWDWFRNQTL 174
Query: 62 KHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDP 121
+TR HLVE MN+ ++ISNLTF NSPFWTIHPVYC V+++ +TILAPL++PNTDGIDP
Sbjct: 175 NYTRPHLVEFMNTTGVVISNLTFINSPFWTIHPVYCSQVIVQNVTILAPLDSPNTDGIDP 234
Query: 122 DSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSE 181
DSS +VC+EDCY+ +GDD++A+KSGWD YG++ RPS NI +RR+ G T T +G+ IGSE
Sbjct: 235 DSSDDVCVEDCYVSTGDDIIAIKSGWDEYGMSYGRPSKNITIRRLVGQT-TSAGIAIGSE 293
Query: 182 MSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDH 241
MSGG+ V + L +++ G+RIKT GRGGY+ NI I N+ + VK I + +H
Sbjct: 294 MSGGVSEVHAENLRFYNSTTGIRIKTSPGRGGYVRNIYISNMSLTDVKTAISFTGRYGEH 353
Query: 242 PDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQ 301
PDE +DP ALP I I+ +V N A +L GI G F +IC+ N++ L + + W
Sbjct: 354 PDEYYDPTALPLIERITVEDVAGQNVKYAGLLEGIEGDTFLDICLLNIN-LSVTSKSPWN 412
Query: 302 CQFVSGFTSQVFPLPCPQLQNK 323
C ++ G++ V P C L+ +
Sbjct: 413 CSYIQGYSDTVSPEICEPLRER 434
>gi|356567484|ref|XP_003551949.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 442
Score = 365 bits (938), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 172/331 (51%), Positives = 240/331 (72%), Gaps = 3/331 (0%)
Query: 1 MDEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRT 60
+ WP+I PLPSYGRGRE GGR++S IHGD L++V+ITG NGTIDGQG +WW++W RT
Sbjct: 112 LGNWPLIVPLPSYGRGRELPGGRYMSFIHGDGLSDVVITGENGTIDGQGDVWWNMWRQRT 171
Query: 61 LKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGID 120
L+ TR +LVE +NS +I+ISN+ F+NSPFW IHPVYC NVV++ +TILAP ++PNTDGID
Sbjct: 172 LQFTRPNLVEFVNSQDIIISNVIFKNSPFWNIHPVYCSNVVVRYVTILAPRDSPNTDGID 231
Query: 121 PDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGS 180
PDSS+NVCIED YI +GDDLVAVKSGWD YGIA RPS I +RRV+G++P +G+ IGS
Sbjct: 232 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRPSYGITIRRVTGSSP-FAGIAIGS 290
Query: 181 EMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSND 240
E SGG+ NV + +++++ G+ IKT+ GRGG I+NIT+ ++ +E + I+I+
Sbjct: 291 ETSGGVENVLAEHINLFNMGVGIHIKTNSGRGGLIKNITVAHVYVENARQGIKIAGDVGG 350
Query: 241 HPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLA--PSA 298
HPDE ++P ALP ++GI+ NV V +A ++ G+ + F ++C+ +++ G+ S
Sbjct: 351 HPDEKFNPNALPVVKGITIKNVWGVKVNQAGLIHGLRNSPFTDVCLSDINFHGMEGPRSP 410
Query: 299 KWQCQFVSGFTSQVFPLPCPQLQNKSSSWCS 329
W+C V GF QV P PC QL ++ C+
Sbjct: 411 SWKCSDVFGFAHQVSPWPCSQLSSQEPGSCA 441
>gi|302755072|ref|XP_002960960.1| hypothetical protein SELMODRAFT_33152 [Selaginella moellendorffii]
gi|300171899|gb|EFJ38499.1| hypothetical protein SELMODRAFT_33152 [Selaginella moellendorffii]
Length = 393
Score = 365 bits (937), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 174/318 (54%), Positives = 229/318 (72%), Gaps = 2/318 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
EWP+I LPSYGRGRE GGRHISLIHG ++ +V+ITG NGTIDGQG +WWD + N+TL
Sbjct: 78 EWPVIPALPSYGRGRELPGGRHISLIHGKNMVDVVITGANGTIDGQGSVWWDWFHNKTLD 137
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
TRGHLVEL++S +I ISN+TF+NSPFWTIHPVYC +V+I+ +TILAP APN DGIDPD
Sbjct: 138 FTRGHLVELIDSRHITISNVTFKNSPFWTIHPVYCSDVLIQDVTILAPPYAPNIDGIDPD 197
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SS+NVCI DCYI +GDDL+++KSGWD +GI PS+N+ + VSG +PT +G+ GSEM
Sbjct: 198 SSSNVCIRDCYISTGDDLISIKSGWDEHGINYGMPSTNVCIHNVSGQSPTSAGIAFGSEM 257
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI +V + + V ++ +G+RIKT GRGGYI NI+I ++++E V + + HP
Sbjct: 258 SGGISDVFIKSVRVANSRSGIRIKTGAGRGGYITNISISDLQLENVSVAFDFTALYGGHP 317
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQC 302
D+G+DP+ALP IRGIS +VV A +AG+ F ++C NVSL + W C
Sbjct: 318 DDGYDPRALPVIRGISIRDVVGHEIGWAGCMAGLEEAPFRDLCFANVSL--SVGAGAWNC 375
Query: 303 QFVSGFTSQVFPLPCPQL 320
GF+ +V P PC +L
Sbjct: 376 SNTYGFSERVVPSPCLEL 393
>gi|357122663|ref|XP_003563034.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 475
Score = 363 bits (933), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 173/318 (54%), Positives = 226/318 (71%), Gaps = 1/318 (0%)
Query: 4 WPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKH 63
WP+IDPLPSYGRGRE G RH SLI G +LT+VIITG NGTIDGQG +WWD + N TL +
Sbjct: 117 WPVIDPLPSYGRGRELPGERHQSLIFGYNLTDVIITGANGTIDGQGAVWWDWFHNHTLNY 176
Query: 64 TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDS 123
TR HLVELM S N++ISNLTF+NSPFW IHPVYC V+++ +TILAPL++PNTDGI+PDS
Sbjct: 177 TRPHLVELMYSTNVVISNLTFKNSPFWNIHPVYCSQVLVEHLTILAPLDSPNTDGINPDS 236
Query: 124 STNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMS 183
STN+CI+ CY+ +GDD++ +KSGWD YGI+ A PSSNI + ++G T +G+ IGSEMS
Sbjct: 237 STNICIKHCYVRNGDDVIVIKSGWDEYGISFAHPSSNISITNITGETRGGAGIAIGSEMS 296
Query: 184 GGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPD 243
GGI V ++L + ++ G+RIKT GRGGY+ N+ I ++ M V + IRI+ +HPD
Sbjct: 297 GGISEVRAERLRIVNSLHGIRIKTAPGRGGYVRNVYIADVSMHNVSMAIRITGNYGEHPD 356
Query: 244 EGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQCQ 303
+D ALP I I+ NVV +N A +L GI G F IC+ NVS L + W C
Sbjct: 357 NNYDRNALPMISNITIENVVGINVGIAGILEGIEGDNFSSICISNVS-LSVQSMHPWNCS 415
Query: 304 FVSGFTSQVFPLPCPQLQ 321
+ G+++ V P C QL+
Sbjct: 416 LIQGYSNSVIPESCDQLR 433
>gi|15238207|ref|NP_199002.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|10177371|dbj|BAB10662.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|50897172|gb|AAT85725.1| At5g41870 [Arabidopsis thaliana]
gi|332007355|gb|AED94738.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 449
Score = 362 bits (930), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 172/320 (53%), Positives = 233/320 (72%), Gaps = 1/320 (0%)
Query: 2 DEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTL 61
++WP+ DPLPSYGRGRE G R+IS IHGD L +V+ITG NGTIDGQG+ WW++W + TL
Sbjct: 118 EKWPLTDPLPSYGRGREHPGRRYISFIHGDGLNDVVITGRNGTIDGQGEPWWNMWRHGTL 177
Query: 62 KHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDP 121
K TR L+E NS NIL+S++ +NSPFWT+HPVYC NVV+ +TILAP ++ NTDGIDP
Sbjct: 178 KFTRPGLIEFNNSTNILVSHVVLQNSPFWTLHPVYCSNVVVHHVTILAPTDSYNTDGIDP 237
Query: 122 DSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSE 181
DSS+NVCIED YI +GDDLVAVKSGWD YGIA RPS +I +RR++G++P +G+ IGSE
Sbjct: 238 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYNRPSRDITIRRITGSSP-FAGIAIGSE 296
Query: 182 MSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDH 241
SGGI NVTV+ + ++++ G+ IKT+ GRGG I+ ITI + +E+V+ I+IS + DH
Sbjct: 297 TSGGIQNVTVENITLYNSGIGIHIKTNIGRGGSIQGITISGVYLEKVRTGIKISGDTGDH 356
Query: 242 PDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQ 301
PD+ ++ ALP +RGI+ NV + +A ++ G+ + F +C NV+L G S W+
Sbjct: 357 PDDKFNTSALPIVRGITIKNVWGIKVERAGMVQGLKDSPFTNLCFSNVTLTGTKRSPIWK 416
Query: 302 CQFVSGFTSQVFPLPCPQLQ 321
C V G +V P PCP+L
Sbjct: 417 CSDVVGAADKVNPTPCPELS 436
>gi|357111082|ref|XP_003557344.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 479
Score = 362 bits (929), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 171/319 (53%), Positives = 227/319 (71%), Gaps = 1/319 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
+WP+IDPLPSYGRGRE G RH SLI G +LT+VIITG NGTIDGQG++WW+ + N TL
Sbjct: 117 DWPVIDPLPSYGRGRELPGKRHQSLIFGSNLTDVIITGANGTIDGQGEIWWNWFHNHTLN 176
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+TR LVE M S +++SNLTF NSPFW IHPVYC V+++ +TILAP+++PNTDGIDPD
Sbjct: 177 YTRPPLVEFMYSTRVVVSNLTFTNSPFWNIHPVYCSQVLVQHLTILAPISSPNTDGIDPD 236
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SSTNVCIEDCYI +GDD+V +KSGWD YGI+ A PSSNI ++ ++G T + +G+ +GSEM
Sbjct: 237 SSTNVCIEDCYIRNGDDIVVIKSGWDEYGISFAYPSSNISIQNITGQTRSSAGIALGSEM 296
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI NV + + ++ G+RIKT GRGGY++N+ I ++ M+ V I IRI+ +HP
Sbjct: 297 SGGISNVRAVGIRIVNSVHGIRIKTAPGRGGYVKNVYIADVSMDNVSIAIRITANYGEHP 356
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQC 302
D+ +D ALP I I+ NV+ N A +L GI G F IC+ NV+ L W C
Sbjct: 357 DDKYDKNALPIISNITIKNVIGANIGVAGMLQGIQGDSFSNICLSNVT-LSTKSMDPWNC 415
Query: 303 QFVSGFTSQVFPLPCPQLQ 321
V G+++ V P C +L+
Sbjct: 416 SLVEGYSNSVSPEICEELR 434
>gi|308080756|ref|NP_001183080.1| uncharacterized protein LOC100501436 precursor [Zea mays]
gi|238009236|gb|ACR35653.1| unknown [Zea mays]
gi|414884141|tpg|DAA60155.1| TPA: hypothetical protein ZEAMMB73_186239 [Zea mays]
Length = 490
Score = 362 bits (928), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 173/319 (54%), Positives = 228/319 (71%), Gaps = 1/319 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
+WP+ID LPSYGRGRE G RH SLI G +LT+VIITG NGT+DGQG +WWD + N TL
Sbjct: 126 DWPVIDALPSYGRGRELPGKRHQSLIFGSNLTDVIITGANGTVDGQGAVWWDWFHNHTLN 185
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+TR LVELM S ++ISNLTF NSPFW IHPVYC V+++ +TILAP+++PNTDGIDPD
Sbjct: 186 YTRPPLVELMYSTRVVISNLTFINSPFWNIHPVYCSQVLVQHLTILAPISSPNTDGIDPD 245
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SSTNVCIEDCY+ +GDD++ +KSGWD YGI+ A PSSNI +R ++G T +G+ GSEM
Sbjct: 246 SSTNVCIEDCYVRNGDDIIVIKSGWDEYGISFAHPSSNISIRNITGQTRNSAGLAFGSEM 305
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI +V + + + ++ G+RIKT GRGGY++N+ + ++ + V I IRI+ +HP
Sbjct: 306 SGGISDVRAEGVRIVNSVHGIRIKTAPGRGGYVKNVYVADVSFDNVSIAIRITGNYGEHP 365
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQC 302
D+G+D ALP I I+ +VV VN A +L GI G F IC+ NVS L + + W C
Sbjct: 366 DDGYDRNALPTISNITIKDVVGVNIGVAGMLQGIPGDSFSGICLSNVS-LSVRSTDPWNC 424
Query: 303 QFVSGFTSQVFPLPCPQLQ 321
V G++S V P C QL+
Sbjct: 425 SLVEGYSSSVSPEVCEQLR 443
>gi|48475087|gb|AAT44156.1| putative polygalacturonase [Oryza sativa Japonica Group]
Length = 474
Score = 362 bits (928), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 171/328 (52%), Positives = 230/328 (70%), Gaps = 2/328 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
WP+IDPLPSYGRGRE GGR++SLIHGD L +V ITG NGTIDGQG +WWD+W RTL
Sbjct: 147 SWPLIDPLPSYGRGRELPGGRYMSLIHGDGLQDVFITGENGTIDGQGSVWWDMWRKRTLP 206
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
TR HL+EL++S +++ISN+ F++SPFW IHPVYC NVVI +T+LAP ++PNTDGIDPD
Sbjct: 207 FTRPHLLELISSTDVIISNVVFQDSPFWNIHPVYCSNVVITNVTVLAPHDSPNTDGIDPD 266
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SS+NVCIED YI +GDDL+++KSGWD YGIA RPSS I +RR++G+ P +G +GSE
Sbjct: 267 SSSNVCIEDSYISTGDDLISIKSGWDEYGIAFGRPSSGITIRRITGSGP-FAGFAVGSET 325
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGG+ NV V+ L+ + G+ +KT+ GRGG+I NIT+ + + + +RI+ HP
Sbjct: 326 SGGVENVHVEHLNFFGMGVGIHVKTNSGRGGFIRNITVSEVTLNGARYGLRIAGDVGGHP 385
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQC 302
D +DP LP + G++ NV N +A ++ GI + F IC+ NV L G W+C
Sbjct: 386 DASYDPSKLPVVDGVTIKNVWGQNIRQAGLVRGIRDSVFSRICLSNVKLYGGDSVGPWKC 445
Query: 303 QFVSGFTSQVFPLPCPQLQNKSS-SWCS 329
+ VSG V P PC +L + S S+C+
Sbjct: 446 RAVSGGALDVQPSPCAELTSTSEMSFCT 473
>gi|125553514|gb|EAY99223.1| hypothetical protein OsI_21181 [Oryza sativa Indica Group]
Length = 448
Score = 361 bits (926), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 171/328 (52%), Positives = 230/328 (70%), Gaps = 2/328 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
WP+IDPLPSYGRGRE GGR++SLIHGD L +V ITG NGTIDGQG +WWD+W RTL
Sbjct: 121 SWPLIDPLPSYGRGRELPGGRYMSLIHGDGLQDVFITGENGTIDGQGSVWWDMWRKRTLP 180
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
TR HL+EL++S +++ISN+ F++SPFW IHPVYC NVVI +T+LAP ++PNTDGIDPD
Sbjct: 181 FTRPHLLELISSTDVIISNVVFQDSPFWNIHPVYCSNVVITNVTVLAPHDSPNTDGIDPD 240
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SS+NVCIED YI +GDDL+++KSGWD YGIA RPSS I +RR++G+ P +G +GSE
Sbjct: 241 SSSNVCIEDSYISTGDDLISIKSGWDEYGIAFGRPSSGITIRRITGSGP-FAGFAVGSET 299
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGG+ NV V+ L+ + G+ +KT+ GRGG+I NIT+ + + + +RI+ HP
Sbjct: 300 SGGVENVHVEHLNFFGMGVGIHVKTNSGRGGFIRNITVSEVTLNGARYGLRIAGDVGGHP 359
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQC 302
D +DP LP + G++ NV N +A ++ GI + F IC+ NV L G W+C
Sbjct: 360 DASYDPSKLPVVDGVTIKNVWGQNIRQAGLVRGIRDSVFSRICLSNVKLYGGDSVGPWKC 419
Query: 303 QFVSGFTSQVFPLPCPQLQNKSS-SWCS 329
+ VSG V P PC +L + S S+C+
Sbjct: 420 RAVSGGALDVQPSPCAELTSTSEMSFCT 447
>gi|115465733|ref|NP_001056466.1| Os05g0587000 [Oryza sativa Japonica Group]
gi|113580017|dbj|BAF18380.1| Os05g0587000 [Oryza sativa Japonica Group]
gi|125568884|gb|EAZ10399.1| hypothetical protein OsJ_00232 [Oryza sativa Japonica Group]
Length = 448
Score = 360 bits (925), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 171/328 (52%), Positives = 230/328 (70%), Gaps = 2/328 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
WP+IDPLPSYGRGRE GGR++SLIHGD L +V ITG NGTIDGQG +WWD+W RTL
Sbjct: 121 SWPLIDPLPSYGRGRELPGGRYMSLIHGDGLQDVFITGENGTIDGQGSVWWDMWRKRTLP 180
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
TR HL+EL++S +++ISN+ F++SPFW IHPVYC NVVI +T+LAP ++PNTDGIDPD
Sbjct: 181 FTRPHLLELISSTDVIISNVVFQDSPFWNIHPVYCSNVVITNVTVLAPHDSPNTDGIDPD 240
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SS+NVCIED YI +GDDL+++KSGWD YGIA RPSS I +RR++G+ P +G +GSE
Sbjct: 241 SSSNVCIEDSYISTGDDLISIKSGWDEYGIAFGRPSSGITIRRITGSGP-FAGFAVGSET 299
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGG+ NV V+ L+ + G+ +KT+ GRGG+I NIT+ + + + +RI+ HP
Sbjct: 300 SGGVENVHVEHLNFFGMGVGIHVKTNSGRGGFIRNITVSEVTLNGARYGLRIAGDVGGHP 359
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQC 302
D +DP LP + G++ NV N +A ++ GI + F IC+ NV L G W+C
Sbjct: 360 DASYDPSKLPVVDGVTIKNVWGQNIRQAGLVRGIRDSVFSRICLSNVKLYGGDSVGPWKC 419
Query: 303 QFVSGFTSQVFPLPCPQLQNKSS-SWCS 329
+ VSG V P PC +L + S S+C+
Sbjct: 420 RAVSGGALDVQPSPCAELTSTSEMSFCT 447
>gi|115456423|ref|NP_001051812.1| Os03g0833800 [Oryza sativa Japonica Group]
gi|40714685|gb|AAR88591.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|108711938|gb|ABF99733.1| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|108711939|gb|ABF99734.1| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113550283|dbj|BAF13726.1| Os03g0833800 [Oryza sativa Japonica Group]
gi|215694675|dbj|BAG89866.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 476
Score = 359 bits (922), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 174/319 (54%), Positives = 229/319 (71%), Gaps = 1/319 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
+WP+IDPLPSYGRGRE G RH SLI G +LT+VIITG NGTIDGQG +WWD + + TL
Sbjct: 116 DWPVIDPLPSYGRGRELPGKRHQSLIFGTNLTDVIITGANGTIDGQGAIWWDWFHSNTLN 175
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+TR HLVELM S +++ISNLTF+NSPFW IHPVYC V+++ +TILAPLN+PNTDGIDPD
Sbjct: 176 YTRPHLVELMYSTDVVISNLTFKNSPFWNIHPVYCSQVLVQHVTILAPLNSPNTDGIDPD 235
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SSTNVCI+ CY+ +GDD++ +KSGWD YGI+ ARPS+NI + ++G T +G+ GSEM
Sbjct: 236 SSTNVCIDHCYVRNGDDVIVIKSGWDEYGISFARPSTNISISNITGETRGGAGIAFGSEM 295
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI V + L + ++ G+RIKT GRGGY++N+ I ++ M+ V + IRI+ +HP
Sbjct: 296 SGGISEVRAEGLRIVNSMHGIRIKTAPGRGGYVKNVYISDVSMDNVSMAIRITGNFGEHP 355
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQC 302
D+ +D ALP I I+ NVV VN A +L GI G F IC+ NVS L + W C
Sbjct: 356 DDKYDRNALPMISNITIENVVGVNVGVAGILEGIEGDNFSSICLSNVS-LSVQSMHPWNC 414
Query: 303 QFVSGFTSQVFPLPCPQLQ 321
+ G+++ V P C QL+
Sbjct: 415 SLIEGYSNSVIPESCEQLR 433
>gi|255589944|ref|XP_002535132.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223523955|gb|EEF27252.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 476
Score = 359 bits (922), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 170/320 (53%), Positives = 225/320 (70%), Gaps = 1/320 (0%)
Query: 2 DEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTL 61
D+WP++D LPSYGRGRE GGRH SLI+G +LT+V+ITG NGTIDGQG +WW + +L
Sbjct: 125 DDWPVVDALPSYGRGRELPGGRHRSLIYGRNLTDVVITGDNGTIDGQGSIWWTWFKTESL 184
Query: 62 KHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDP 121
+TR HLVELMNS+ I+ISNLTF NSPFWTIHPVYC V+++ +TI APL++PNTDGIDP
Sbjct: 185 NYTRPHLVELMNSSGIVISNLTFINSPFWTIHPVYCSKVIVQNVTIRAPLDSPNTDGIDP 244
Query: 122 DSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSE 181
DSS +VCIEDC+I +GDDL+A+KSGWD YGI RP NI +RR+ G T + +G+ IGSE
Sbjct: 245 DSSDDVCIEDCFISTGDDLIAIKSGWDEYGILYGRPCRNITIRRLVGQTRSSAGIAIGSE 304
Query: 182 MSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDH 241
MSGG+ V + + +++ G+RIKT GRGGY+ NI + N+ + V I IR + +H
Sbjct: 305 MSGGVSEVHAENILFYNSNTGIRIKTSPGRGGYVRNIYVSNVTLNDVNIAIRFTGNYGEH 364
Query: 242 PDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQ 301
PDE +DPKALP I I+ +V+ N A +L GI F IC+ N+S L + W
Sbjct: 365 PDEHYDPKALPIIERITIEHVMGDNIKYAGILDGIEADSFVNICLSNIS-LNVTSKFPWN 423
Query: 302 CQFVSGFTSQVFPLPCPQLQ 321
C ++ G++ V P C L+
Sbjct: 424 CSYIQGYSESVSPEICEPLR 443
>gi|108711940|gb|ABF99735.1| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|218194041|gb|EEC76468.1| hypothetical protein OsI_14200 [Oryza sativa Indica Group]
gi|222626115|gb|EEE60247.1| hypothetical protein OsJ_13254 [Oryza sativa Japonica Group]
Length = 460
Score = 359 bits (921), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 174/319 (54%), Positives = 229/319 (71%), Gaps = 1/319 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
+WP+IDPLPSYGRGRE G RH SLI G +LT+VIITG NGTIDGQG +WWD + + TL
Sbjct: 100 DWPVIDPLPSYGRGRELPGKRHQSLIFGTNLTDVIITGANGTIDGQGAIWWDWFHSNTLN 159
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+TR HLVELM S +++ISNLTF+NSPFW IHPVYC V+++ +TILAPLN+PNTDGIDPD
Sbjct: 160 YTRPHLVELMYSTDVVISNLTFKNSPFWNIHPVYCSQVLVQHVTILAPLNSPNTDGIDPD 219
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SSTNVCI+ CY+ +GDD++ +KSGWD YGI+ ARPS+NI + ++G T +G+ GSEM
Sbjct: 220 SSTNVCIDHCYVRNGDDVIVIKSGWDEYGISFARPSTNISISNITGETRGGAGIAFGSEM 279
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI V + L + ++ G+RIKT GRGGY++N+ I ++ M+ V + IRI+ +HP
Sbjct: 280 SGGISEVRAEGLRIVNSMHGIRIKTAPGRGGYVKNVYISDVSMDNVSMAIRITGNFGEHP 339
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQC 302
D+ +D ALP I I+ NVV VN A +L GI G F IC+ NVS L + W C
Sbjct: 340 DDKYDRNALPMISNITIENVVGVNVGVAGILEGIEGDNFSSICLSNVS-LSVQSMHPWNC 398
Query: 303 QFVSGFTSQVFPLPCPQLQ 321
+ G+++ V P C QL+
Sbjct: 399 SLIEGYSNSVIPESCEQLR 417
>gi|242091535|ref|XP_002441600.1| hypothetical protein SORBIDRAFT_09g030140 [Sorghum bicolor]
gi|241946885|gb|EES20030.1| hypothetical protein SORBIDRAFT_09g030140 [Sorghum bicolor]
Length = 439
Score = 358 bits (919), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 167/324 (51%), Positives = 227/324 (70%), Gaps = 1/324 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
WP+IDPLPSYGRGRE GGR++SLIHG+ L +V ITG NGTIDGQG +WWD+W RTL
Sbjct: 112 SWPLIDPLPSYGRGRELPGGRYMSLIHGNGLQDVFITGENGTIDGQGSLWWDMWKKRTLP 171
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
TR HL+ELM S ++++SN+ F++SPFW IHPVYC NVVI +T+LAP ++PNTDGID D
Sbjct: 172 FTRPHLLELMYSTDVVVSNVVFQDSPFWNIHPVYCSNVVIANVTVLAPHDSPNTDGIDLD 231
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SS+NVCIED YI +GDDL+++KSGWD YGIA RPSS I +RR++G+ P +G +GSE
Sbjct: 232 SSSNVCIEDSYISAGDDLISIKSGWDEYGIAFGRPSSGITIRRITGSGP-FAGFAVGSET 290
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGG+ NV V+ L+++ G+ IKT+ GRGG+I NIT+ + + + +RI+ HP
Sbjct: 291 SGGVENVLVEHLNLFGMGVGIHIKTNSGRGGFIRNITVSEVTLNGARYGLRIAGDVGGHP 350
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQC 302
D ++P LP + ++ NV+ N +A ++ GI + F IC+ NV L G A W+C
Sbjct: 351 DASYNPSVLPVVNSVTIKNVLGQNIRQAGLIRGIRNSVFSNICLSNVKLYGSASIGPWKC 410
Query: 303 QFVSGFTSQVFPLPCPQLQNKSSS 326
+ VSG V P PC +L + S +
Sbjct: 411 RAVSGAALDVQPSPCTELASTSET 434
>gi|242043478|ref|XP_002459610.1| hypothetical protein SORBIDRAFT_02g007470 [Sorghum bicolor]
gi|241922987|gb|EER96131.1| hypothetical protein SORBIDRAFT_02g007470 [Sorghum bicolor]
Length = 499
Score = 358 bits (919), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 173/319 (54%), Positives = 226/319 (70%), Gaps = 1/319 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
+WP+ID LPSYGRGRE G RH SLI G +LT+VIITG NGTIDGQG +WWD + N TL
Sbjct: 133 DWPVIDALPSYGRGRELPGKRHQSLIFGSNLTDVIITGSNGTIDGQGAVWWDWFHNHTLN 192
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+TR LVELM S ++ISNLTF NSPFW IHPVYC V+ + +TILAP+++PNTDGIDPD
Sbjct: 193 YTRPPLVELMYSTRVVISNLTFINSPFWNIHPVYCSQVLAQHLTILAPISSPNTDGIDPD 252
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SSTNVCIEDCYI +GDD+V +KSGWD YGI+ A PSSNI +R ++G T +G+ GSEM
Sbjct: 253 SSTNVCIEDCYIRNGDDIVVIKSGWDEYGISFAHPSSNISIRNITGQTRNSAGLAFGSEM 312
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI +V + + + ++ G+RIKT GRGGY++N+ + ++ + V I IRI+ +HP
Sbjct: 313 SGGISDVRAEGIRIVNSVHGIRIKTAPGRGGYVKNVYVADVSFDNVSIAIRITGNYGEHP 372
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQC 302
D+ ++ ALP I I+ +VV VN A +L GI G F IC+ NVS L + + W C
Sbjct: 373 DDRYNKSALPTISNITIKDVVGVNIGVAGMLQGIPGDNFSNICLSNVS-LSVRSTDPWNC 431
Query: 303 QFVSGFTSQVFPLPCPQLQ 321
V G+++ V P C QL+
Sbjct: 432 SLVEGYSNSVSPEVCEQLR 450
>gi|125538851|gb|EAY85246.1| hypothetical protein OsI_06620 [Oryza sativa Indica Group]
Length = 443
Score = 358 bits (918), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 175/329 (53%), Positives = 229/329 (69%), Gaps = 2/329 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
WP+ +PLPSYGRGRE G R+ S IHGD L +V+ITG G IDGQG +WW++W RTL+
Sbjct: 116 SWPLAEPLPSYGRGRELPGARYASFIHGDGLHDVVITGDKGIIDGQGDVWWNMWRQRTLQ 175
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
HTR +L+E M+S+ I ISN+ +NSPFW IHPVYC NVVI M I+AP ++PNTDG+DPD
Sbjct: 176 HTRPNLLEFMHSSGIHISNIVLKNSPFWNIHPVYCDNVVITNMMIIAPHDSPNTDGVDPD 235
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SSTNVCIED YI +GDDLVA+KSGWD YGIA RPSS I +RRV G++P SG+ IGSE
Sbjct: 236 SSTNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPSSGITIRRVRGSSP-FSGIAIGSEA 294
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGG+ +V V+ ++++ G+ IKT+ GRGG+I NIT+ N++M V+ +RI+ DHP
Sbjct: 295 SGGVSDVLVEDCSIFNSGYGIHIKTNIGRGGFIRNITVDNVRMNSVRNGLRIAGDVGDHP 354
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQC 302
DE + ALP + G+S NV VN + + GI + F IC+ NV L G +A W+C
Sbjct: 355 DEHFSQLALPTVDGVSIKNVWGVNVQQPGSIEGIRNSPFTRICLANVKLFGWRNNAAWKC 414
Query: 303 QFVSGFTSQVFPLPCPQLQNK-SSSWCSF 330
+ V G V P PC +L SS +CS+
Sbjct: 415 RDVHGAALGVQPGPCAELTTSLSSGFCSY 443
>gi|242032389|ref|XP_002463589.1| hypothetical protein SORBIDRAFT_01g002550 [Sorghum bicolor]
gi|241917443|gb|EER90587.1| hypothetical protein SORBIDRAFT_01g002550 [Sorghum bicolor]
Length = 459
Score = 358 bits (918), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 171/321 (53%), Positives = 226/321 (70%), Gaps = 1/321 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
WP+IDPLPSYGRGRE G RH SLI G +LT+VIITG NG+IDGQG +WW + N TL
Sbjct: 100 HWPVIDPLPSYGRGRELPGKRHQSLIFGLNLTDVIITGANGSIDGQGAIWWGWFRNHTLN 159
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+TR HLVELM S N++ISNLTF+NSPFW IHPVYC V+++ +TILAPLN+PNTDG+ PD
Sbjct: 160 YTRPHLVELMYSTNVVISNLTFKNSPFWNIHPVYCSQVLVQHVTILAPLNSPNTDGVSPD 219
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SSTNVCI CY+ +GDD++ +KSGWD YGI+ A+PSSNI + ++G T +G+ GSEM
Sbjct: 220 SSTNVCINHCYVRNGDDVIVIKSGWDEYGISFAQPSSNISISDITGETRGGAGIAFGSEM 279
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI V L + ++ G+RIKT GRGGY++N+ I ++ M+ V + IRI+ +HP
Sbjct: 280 SGGISEVRAVGLRIVNSLHGIRIKTAPGRGGYVKNVYIADVSMDNVSMAIRITGNYGEHP 339
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQC 302
D+ +D ALP I I+ +VV VN A +L GI G F IC+ NVS L + + W C
Sbjct: 340 DDKYDRTALPVISNITIKDVVGVNIGVAGILEGIQGDNFSNICLSNVS-LSVQSAHPWNC 398
Query: 303 QFVSGFTSQVFPLPCPQLQNK 323
+ G+++ V P C QL++
Sbjct: 399 SLIEGYSNSVIPESCEQLKSN 419
>gi|115445377|ref|NP_001046468.1| Os02g0256100 [Oryza sativa Japonica Group]
gi|50251675|dbj|BAD29699.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|50252020|dbj|BAD27952.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|113535999|dbj|BAF08382.1| Os02g0256100 [Oryza sativa Japonica Group]
gi|215686497|dbj|BAG87758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765347|dbj|BAG87044.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222622550|gb|EEE56682.1| hypothetical protein OsJ_06128 [Oryza sativa Japonica Group]
Length = 443
Score = 358 bits (918), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 174/329 (52%), Positives = 228/329 (69%), Gaps = 2/329 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
WP+ +PLPSYGRGRE G R+ S IHGD L +++ITG G IDGQG +WW++W RTL+
Sbjct: 116 SWPLAEPLPSYGRGRELPGARYTSFIHGDGLRDIVITGDKGIIDGQGDVWWNMWRQRTLQ 175
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
HTR +L+E M+S+ I ISN+ +NSPFW IHPVYC NVVI M I+AP ++PNTDG+DPD
Sbjct: 176 HTRPNLLEFMHSSGIHISNIVLKNSPFWNIHPVYCDNVVITNMMIIAPHDSPNTDGVDPD 235
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SSTNVCIED YI +GDDLVA+KSGWD YGIA RPSS I +RRV G++P SG+ IGSE
Sbjct: 236 SSTNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPSSGITIRRVRGSSP-FSGIAIGSEA 294
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGG+ NV V+ ++++ G+ IKT+ GRGG+I NIT+ N++M V+ +RI+ DHP
Sbjct: 295 SGGVSNVLVEDCSIFNSGYGIHIKTNIGRGGFIRNITVDNVRMNSVRNGLRIAGDVGDHP 354
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQC 302
DE + ALP + +S NV VN + + GI + F IC+ NV L G +A W+C
Sbjct: 355 DEHFSQLALPTVDAVSIKNVWGVNVQQPGSIEGIRNSPFTRICLANVKLFGWRNNAAWKC 414
Query: 303 QFVSGFTSQVFPLPCPQLQNK-SSSWCSF 330
+ V G V P PC +L SS +CS+
Sbjct: 415 RDVHGAALGVQPGPCAELTTSLSSGFCSY 443
>gi|226497942|ref|NP_001151479.1| polygalacturonase precursor [Zea mays]
gi|195647062|gb|ACG42999.1| polygalacturonase [Zea mays]
Length = 477
Score = 357 bits (916), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 173/328 (52%), Positives = 229/328 (69%), Gaps = 3/328 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
WP+IDPLPSYGRGR+ G RH SLI G +LT+VIITG NG+IDGQG +WW + N TL
Sbjct: 116 HWPVIDPLPSYGRGRDLPGKRHQSLIFGLNLTDVIITGANGSIDGQGAIWWGWFHNHTLN 175
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+TR HLVELM S N++ISNLTF+NSPFW IHPVYC V+++ +TILAPLN+PNTDG+ PD
Sbjct: 176 YTRPHLVELMYSTNVVISNLTFKNSPFWNIHPVYCSQVLVQHVTILAPLNSPNTDGVTPD 235
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SSTNVCI CY+ +G D++ +KSGWD YGI+ A+PSSNI + ++G T SG+ GSEM
Sbjct: 236 SSTNVCINHCYVRNGGDVIVIKSGWDEYGISFAQPSSNISISDITGETRGGSGIAFGSEM 295
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI V L + ++ G+RIKT GRGGY+EN+ I ++ M+ V + IRI+ +HP
Sbjct: 296 SGGISEVRAVGLRIVNSLHGIRIKTAPGRGGYVENVYIADVSMDNVSMAIRITGNYGEHP 355
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQC 302
D+ +D ALP I I+ +VV VN A +L GI G F IC+ NVS L + + W C
Sbjct: 356 DDKYDSTALPVISNITIKDVVGVNIGVAGILEGIQGDNFSNICLSNVS-LSVQSAHPWNC 414
Query: 303 QFVSGFTSQVFPLPCPQLQN--KSSSWC 328
+ G+++ V P C QL++ + +S C
Sbjct: 415 SLIEGYSNSVIPESCEQLRSNCRQTSIC 442
>gi|223948047|gb|ACN28107.1| unknown [Zea mays]
gi|414873755|tpg|DAA52312.1| TPA: polygalacturonase isoform 1 [Zea mays]
gi|414873756|tpg|DAA52313.1| TPA: polygalacturonase isoform 2 [Zea mays]
Length = 477
Score = 356 bits (914), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 173/328 (52%), Positives = 229/328 (69%), Gaps = 3/328 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
WP+IDPLPSYGRGR+ G RH SLI G +LT+VIITG NG+IDGQG +WW + N TL
Sbjct: 116 HWPVIDPLPSYGRGRDLPGKRHQSLIFGLNLTDVIITGANGSIDGQGAIWWGWFHNHTLN 175
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+TR HLVELM S N++ISNLTF+NSPFW IHPVYC V+++ +TILAPLN+PNTDG+ PD
Sbjct: 176 YTRPHLVELMYSTNVVISNLTFKNSPFWNIHPVYCSQVLVRHVTILAPLNSPNTDGVTPD 235
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SSTNVCI CY+ +G D++ +KSGWD YGI+ A+PSSNI + ++G T SG+ GSEM
Sbjct: 236 SSTNVCINHCYVRNGGDVIVIKSGWDEYGISFAQPSSNISISDITGETRGGSGIAFGSEM 295
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI V L + ++ G+RIKT GRGGY+EN+ I ++ M+ V + IRI+ +HP
Sbjct: 296 SGGISEVRAVGLRIVNSLHGIRIKTAPGRGGYVENVYIADVSMDNVSMAIRITGNYGEHP 355
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQC 302
D+ +D ALP I I+ +VV VN A +L GI G F IC+ NVS L + + W C
Sbjct: 356 DDKYDSTALPVISNITIKDVVGVNIGVAGILEGIQGDNFSNICLSNVS-LSVQSAHPWNC 414
Query: 303 QFVSGFTSQVFPLPCPQLQN--KSSSWC 328
+ G+++ V P C QL++ + +S C
Sbjct: 415 SLIEGYSNSVIPESCEQLRSNCRQTSIC 442
>gi|297742322|emb|CBI34471.3| unnamed protein product [Vitis vinifera]
Length = 447
Score = 355 bits (912), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 172/332 (51%), Positives = 242/332 (72%), Gaps = 5/332 (1%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
WP+I PLPSYGRGRE GGR++S IH D + +VIITG NGTIDGQG++WW++W RTL+
Sbjct: 116 SWPLIAPLPSYGRGRELPGGRYMSFIHADGVHDVIITGENGTIDGQGEVWWNMWRQRTLQ 175
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
TR +L+EL+NS NI+ISN+ FR+SPFW IHPVYCRNVV++ +TILAP ++PNTDGIDPD
Sbjct: 176 FTRPNLIELINSRNIIISNVIFRDSPFWNIHPVYCRNVVVQFVTILAPHDSPNTDGIDPD 235
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SS+NVCIED YI +GDDLVAVKSGWD YGIA RPSS I +RR++G++P +G+ +GSE
Sbjct: 236 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRPSSGITIRRITGSSP-FAGIAVGSET 294
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGG+ NV + +++++ G+ +KT+ GRGG I NIT+ N+ ME+ + I+I+ DHP
Sbjct: 295 SGGVQNVFAEHINLYNMGVGIHLKTNIGRGGVIRNITVSNVYMEKARTGIKIAGDVGDHP 354
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLG-LAP-SAKW 300
D+ ++P ALP ++G+ +V ++ + + G+ + F IC+ ++L G + P +A W
Sbjct: 355 DDNFNPNALPVVKGVVIRDVWGLDVLQPGSIIGLKNSPFTGICLSKINLHGKIKPGTAPW 414
Query: 301 QCQFVSGFTSQVFPLPCPQLQN--KSSSWCSF 330
+C VSG V P PC +L + ++ S SF
Sbjct: 415 KCSDVSGAAVGVSPWPCSELTSPGQTGSCSSF 446
>gi|224032157|gb|ACN35154.1| unknown [Zea mays]
Length = 430
Score = 353 bits (905), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 169/315 (53%), Positives = 221/315 (70%), Gaps = 1/315 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
WP+IDPLPSYGRGR+ G RH SLI G +LT+VIITG NG+IDGQG +WW + N TL
Sbjct: 116 HWPVIDPLPSYGRGRDLPGKRHQSLIFGLNLTDVIITGANGSIDGQGAIWWGWFHNHTLN 175
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+TR HLVELM S N++ISNLTF+NSPFW IHPVYC V+++ +TILAPLN+PNTDG+ PD
Sbjct: 176 YTRPHLVELMYSTNVVISNLTFKNSPFWNIHPVYCSQVLVRHVTILAPLNSPNTDGVTPD 235
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SSTNVCI CY+ +G D++ +KSGWD YGI+ A+PSSNI + ++G T SG+ GSEM
Sbjct: 236 SSTNVCINHCYVRNGGDVIVIKSGWDEYGISFAQPSSNISISDITGETRGGSGIAFGSEM 295
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI V L + ++ G+RIKT GRGGY+EN+ I ++ M+ V + IRI+ +HP
Sbjct: 296 SGGISEVRAVGLRIVNSLHGIRIKTAPGRGGYVENVYIADVSMDNVSMAIRITGNYGEHP 355
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQC 302
D+ +D ALP I I+ +VV VN A +L GI G F IC+ NVS L + + W C
Sbjct: 356 DDKYDSTALPVISNITIKDVVGVNIGVAGILEGIQGDNFSNICLSNVS-LSVQSAHPWNC 414
Query: 303 QFVSGFTSQVFPLPC 317
+ G+++ V P C
Sbjct: 415 SLIEGYSNSVIPESC 429
>gi|168058134|ref|XP_001781065.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667462|gb|EDQ54091.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 446
Score = 352 bits (902), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 170/324 (52%), Positives = 222/324 (68%)
Query: 1 MDEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRT 60
++++P+I LPSYGRGRE G RH SLI+G+ L +V+ITG NGTIDGQG +WW+ + N+T
Sbjct: 120 LNDYPVIPGLPSYGRGRELPGPRHRSLINGEGLEDVVITGDNGTIDGQGAVWWNAFQNKT 179
Query: 61 LKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGID 120
L +TRGHLVEL++S +ILISNLTFR+SPFWTIHPVYCRNVV+K MT+LAPLN+PNTDGID
Sbjct: 180 LDYTRGHLVELIDSKDILISNLTFRDSPFWTIHPVYCRNVVVKDMTLLAPLNSPNTDGID 239
Query: 121 PDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGS 180
PDSS VCIEDCYI GDD +A+KSGWD YG A PS +I +RR+ + T +G+ GS
Sbjct: 240 PDSSQYVCIEDCYISVGDDAIAIKSGWDEYGTAYGMPSQHIDIRRIVVHSETSAGIAFGS 299
Query: 181 EMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSND 240
EMSGGI +V VD + ++ A G+R KT GRGGYI NIT+ N+ M V I + +
Sbjct: 300 EMSGGISDVKVDHMMIFGARWGIRFKTGPGRGGYIRNITVDNVNMRSVNTAIAFTGNYGE 359
Query: 241 HPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKW 300
HPDE W+ P I + N+V + T A + G+ + F I + N++L + S W
Sbjct: 360 HPDENWNRTDYPVIENVLIENIVGEDITHAGLFLGLPESPFLNIHLANIALDTKSESEDW 419
Query: 301 QCQFVSGFTSQVFPLPCPQLQNKS 324
C V+G V+P PCP +
Sbjct: 420 NCSSVAGTYFFVWPQPCPDFTKEE 443
>gi|4490311|emb|CAB38802.1| putative protein [Arabidopsis thaliana]
gi|7270292|emb|CAB80061.1| putative protein [Arabidopsis thaliana]
Length = 462
Score = 351 bits (901), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 190/337 (56%), Positives = 240/337 (71%), Gaps = 25/337 (7%)
Query: 1 MDEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRT 60
+DEWPII+PLPSYGRGRER GGRHISLIHGD+LTNV+IT L ++
Sbjct: 143 LDEWPIIEPLPSYGRGRERPGGRHISLIHGDNLTNVVITVSV------------LRFSVM 190
Query: 61 LKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRN----VVIKGMTILAP-LNAPN 115
+K G L++ ++ + W I N ++ +T L L +
Sbjct: 191 IKEKMGQLMDRGKCGG------SYGGTEHWCIREAILLNSRTLIISSSLTSLCSILLSGQ 244
Query: 116 TDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSG 175
+ DSSTNVCIEDCYIESGDDLVAVKSGWD YG+A+ARPSSNI++RR+SGTT TCSG
Sbjct: 245 SILFIADSSTNVCIEDCYIESGDDLVAVKSGWDQYGMAVARPSSNIVIRRISGTTRTCSG 304
Query: 176 VGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRIS 235
VGIGSEMSGGIFN+TV+ +HVWD+AAG+RIKTDKGRGGYI NIT N+ +E+VK+PIR S
Sbjct: 305 VGIGSEMSGGIFNITVEDIHVWDSAAGLRIKTDKGRGGYISNITFNNVLLEKVKVPIRFS 364
Query: 236 RGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLA 295
GSNDH D+ WDPKALP+++GI NVVS+N+ KAP+L G+ GT F+++C++NV+LLGL
Sbjct: 365 SGSNDHSDDKWDPKALPRVKGIYISNVVSLNSRKAPMLLGVEGTSFQDVCLRNVTLLGLP 424
Query: 296 PSAKWQCQFVSGFTSQVFPLPCPQLQNKSSS--WCSF 330
+ KW+C+ VSG+ S VFPL CPQL K S CS+
Sbjct: 425 KTEKWKCKDVSGYASDVFPLSCPQLLQKKGSIAQCSY 461
>gi|168005670|ref|XP_001755533.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693240|gb|EDQ79593.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 393
Score = 351 bits (900), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 174/318 (54%), Positives = 223/318 (70%), Gaps = 1/318 (0%)
Query: 1 MDEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGY-NGTIDGQGQMWWDLWWNR 59
+ ++PII LPSYGRGRE G RH SLI+G+ L +V+ITG NGTIDGQG +WWD ++N+
Sbjct: 76 LKDYPIIPGLPSYGRGRELPGPRHSSLINGEGLEDVVITGSDNGTIDGQGAVWWDAFYNK 135
Query: 60 TLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGI 119
TL +TRGHLVEL++S++ILISNLTFR+SPFWTIHPVYCRNVV+K MTILAPL++PNTDGI
Sbjct: 136 TLDYTRGHLVELIDSSDILISNLTFRDSPFWTIHPVYCRNVVVKDMTILAPLDSPNTDGI 195
Query: 120 DPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIG 179
DPDSS NVCIEDCYI G D +A+KSGWD YG + PS +I VRR++ + T +G+ G
Sbjct: 196 DPDSSHNVCIEDCYISVGHDAIAIKSGWDEYGTSYGMPSKHIDVRRITVHSKTSAGIAFG 255
Query: 180 SEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSN 239
SEMSGGI +V VD + ++ A G+R KT GRGGYI N+T+ N+ M V I +
Sbjct: 256 SEMSGGISDVKVDHMMIFGARWGIRFKTGLGRGGYIRNVTVDNVDMHSVGTAIAFTGNYG 315
Query: 240 DHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAK 299
+HPDE W+ P I IS NVV N T A + G+ + F I + N++L + S
Sbjct: 316 EHPDENWNRTDYPVIENISIENVVGENITHAGLFLGLPESPFHNIHLANIALDVKSESDD 375
Query: 300 WQCQFVSGFTSQVFPLPC 317
W C V+G V+P PC
Sbjct: 376 WNCSSVAGTYFFVWPQPC 393
>gi|293332875|ref|NP_001170283.1| uncharacterized protein LOC100384246 precursor [Zea mays]
gi|224028521|gb|ACN33336.1| unknown [Zea mays]
gi|413925951|gb|AFW65883.1| hypothetical protein ZEAMMB73_311601 [Zea mays]
Length = 451
Score = 350 bits (899), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 167/323 (51%), Positives = 221/323 (68%), Gaps = 1/323 (0%)
Query: 4 WPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKH 63
WP+++PLPSYGRGRE G R+ S IHGD L +V+ITG G IDGQG++WW++W RTL+H
Sbjct: 124 WPLVEPLPSYGRGRELPGPRYASFIHGDGLRDVVITGDRGVIDGQGEVWWNMWRRRTLEH 183
Query: 64 TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDS 123
TR +LVE M+S I ISN+ +NSPFW IHPVYC NVV+ M ILAP ++PNTDG+DPDS
Sbjct: 184 TRPNLVEFMHSTGIHISNIVLKNSPFWNIHPVYCDNVVVTNMMILAPRDSPNTDGVDPDS 243
Query: 124 STNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMS 183
S+NVCIED YI +GDDLVA+KSGWD YGIA RPS+ + VRRV G++P SG+ IGSE S
Sbjct: 244 SSNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPSAGVTVRRVRGSSP-FSGIAIGSEAS 302
Query: 184 GGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPD 243
GG+ +V V+ ++D+ G+ IKT+ GRGGYI N+T+ +++ V+ +RI+ DHPD
Sbjct: 303 GGVRDVLVEDCAIFDSGYGIHIKTNVGRGGYIRNVTVDGVRLTGVRSGVRIAGDVGDHPD 362
Query: 244 EGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQCQ 303
+ A+P + + NV VN + L GI + F IC+ NV L G A W+C+
Sbjct: 363 AHFSQLAVPTVDAVRISNVWGVNVQQPGSLEGIRASPFTRICLSNVKLFGWRSDAAWKCR 422
Query: 304 FVSGFTSQVFPLPCPQLQNKSSS 326
V G V P PC +L +S
Sbjct: 423 DVRGAALGVQPSPCAELATSFAS 445
>gi|224034791|gb|ACN36471.1| unknown [Zea mays]
Length = 347
Score = 350 bits (897), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 167/323 (51%), Positives = 221/323 (68%), Gaps = 1/323 (0%)
Query: 4 WPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKH 63
WP+++PLPSYGRGRE G R+ S IHGD L +V+ITG G IDGQG++WW++W RTL+H
Sbjct: 20 WPLVEPLPSYGRGRELPGPRYASFIHGDGLRDVVITGDRGVIDGQGEVWWNMWRRRTLEH 79
Query: 64 TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDS 123
TR +LVE M+S I ISN+ +NSPFW IHPVYC NVV+ M ILAP ++PNTDG+DPDS
Sbjct: 80 TRPNLVEFMHSTGIHISNIVLKNSPFWNIHPVYCDNVVVTNMMILAPRDSPNTDGVDPDS 139
Query: 124 STNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMS 183
S+NVCIED YI +GDDLVA+KSGWD YGIA RPS+ + VRRV G++P SG+ IGSE S
Sbjct: 140 SSNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPSAGVTVRRVRGSSP-FSGIAIGSEAS 198
Query: 184 GGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPD 243
GG+ +V V+ ++D+ G+ IKT+ GRGGYI N+T+ +++ V+ +RI+ DHPD
Sbjct: 199 GGVRDVLVEDCAIFDSGYGIHIKTNVGRGGYIRNVTVDGVRLTGVRSGVRIAGDVGDHPD 258
Query: 244 EGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQCQ 303
+ A+P + + NV VN + L GI + F IC+ NV L G A W+C+
Sbjct: 259 AHFSQLAVPTVDAVRISNVWGVNVQQPGSLEGIRASPFTRICLSNVKLFGWRSDAAWKCR 318
Query: 304 FVSGFTSQVFPLPCPQLQNKSSS 326
V G V P PC +L +S
Sbjct: 319 DVRGAALGVQPSPCAELATSFAS 341
>gi|302758838|ref|XP_002962842.1| hypothetical protein SELMODRAFT_78556 [Selaginella moellendorffii]
gi|300169703|gb|EFJ36305.1| hypothetical protein SELMODRAFT_78556 [Selaginella moellendorffii]
Length = 439
Score = 349 bits (895), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 171/331 (51%), Positives = 229/331 (69%), Gaps = 5/331 (1%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRT-- 60
+WPIIDPLPSYGRGRE GGRHISL+HG++L +V+ITG NGTIDGQG WW W++
Sbjct: 104 QWPIIDPLPSYGRGRELPGGRHISLVHGENLEDVVITGENGTIDGQGAKWWR--WSKLGL 161
Query: 61 LKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGID 120
L HTRGHLVE ++S NI+ISN+T NSPFWT+HPVYC NV+I+G+TILAP ++PNTDGID
Sbjct: 162 LNHTRGHLVEFVSSTNIIISNVTLVNSPFWTLHPVYCTNVLIQGVTILAPQDSPNTDGID 221
Query: 121 PDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGS 180
PDSS+NVCI+DCYI +GDD++A+KSGWD YGIA +PSSNI +RRV+G T + + IGS
Sbjct: 222 PDSSSNVCIQDCYISNGDDMIAIKSGWDEYGIAYGQPSSNIHIRRVTGQTKRGAAIAIGS 281
Query: 181 EMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSND 240
E SGGI NV V+ L +GV I+T GRG YI N+ + +I + ++ I IS S++
Sbjct: 282 ETSGGIENVLVEDLVAVSTKSGVSIRTGVGRGAYIRNVVLSSITLLDIQTAITISGFSSE 341
Query: 241 HPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKW 300
HPD G++ A P + ++ V + + GI F +IC+++++L W
Sbjct: 342 HPDNGYNATAFPVVEKVTVRGVTGNTLDRPGRILGIPEVPFRDICLEDIALDASTGLTAW 401
Query: 301 QCQFVSGFTSQVFPLPCPQL-QNKSSSWCSF 330
+C V G++S V P C +L +N S C F
Sbjct: 402 KCTDVEGYSSSVTPKICKELSENNSPDACPF 432
>gi|449452247|ref|XP_004143871.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
gi|449501789|ref|XP_004161459.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 445
Score = 347 bits (890), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 178/320 (55%), Positives = 233/320 (72%), Gaps = 3/320 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
WP+I PLPSYGRGRER GGR+ISLIHGD + +V+ITG NGTIDGQG WW++W TLK
Sbjct: 114 NWPVIAPLPSYGRGRERPGGRYISLIHGDGVHDVVITGENGTIDGQGDAWWNMWRTGTLK 173
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+TR LVE +NS NI+ISN+ F NSPFW IHPVYCRNVV++ +TILAP ++PNTDG+DPD
Sbjct: 174 YTRPSLVEFVNSYNIIISNVMFLNSPFWNIHPVYCRNVVVRYVTILAPRDSPNTDGVDPD 233
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SS NVCIED YI +GDDLVAVKSGWD YGIA R S +I +RR+SG++P +GV +GSE
Sbjct: 234 SSNNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRCSYDITIRRISGSSP-FAGVAVGSEA 292
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGG+ NV + L+ +D G+ IKT+ GRGG+I+NIT+ N+ ME + ++I+ + DHP
Sbjct: 293 SGGVANVLAEHLNFYDMGVGINIKTNIGRGGFIKNITVSNVYMENSRKGLKIAGDAGDHP 352
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLA--PSAKW 300
D+ +DP ALP ++ I+ N+ VN +A + G+ + F IC+ N++L G S W
Sbjct: 353 DDKFDPNALPIVKDITIKNIWGVNVQQAGSIYGLRDSPFTGICLSNINLRGATRPRSVPW 412
Query: 301 QCQFVSGFTSQVFPLPCPQL 320
C +VSG S V P PC +L
Sbjct: 413 TCSYVSGAASLVSPWPCSEL 432
>gi|302815490|ref|XP_002989426.1| hypothetical protein SELMODRAFT_129742 [Selaginella moellendorffii]
gi|300142820|gb|EFJ09517.1| hypothetical protein SELMODRAFT_129742 [Selaginella moellendorffii]
Length = 439
Score = 347 bits (889), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 167/325 (51%), Positives = 226/325 (69%), Gaps = 4/325 (1%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRT-- 60
+WPIIDPLPSYGRGRE GGRHISL+HG++L +V+ITG NGTIDGQG WW W++
Sbjct: 104 QWPIIDPLPSYGRGRELPGGRHISLVHGENLEDVVITGENGTIDGQGAKWWR--WSKLGL 161
Query: 61 LKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGID 120
L HTRGHLVE ++S NI+ISN+T NSPFWT+HPVYC NV+I+G+TILAP ++PNTDGID
Sbjct: 162 LNHTRGHLVEFVSSTNIIISNVTLVNSPFWTLHPVYCTNVLIQGVTILAPQDSPNTDGID 221
Query: 121 PDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGS 180
PDSS+NVCI+DCYI +GDD++A+KSGWD YGIA +PSSNI +RRV+G T + + IGS
Sbjct: 222 PDSSSNVCIQDCYISNGDDMIAIKSGWDEYGIAYGQPSSNIHIRRVTGQTKRGAAIAIGS 281
Query: 181 EMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSND 240
E SGGI NV V+ L +G+ I+T GRG YI N+ + +I + ++ I IS S++
Sbjct: 282 ETSGGIENVLVEDLVAVSTKSGISIRTGVGRGAYIRNVVLSSITLLDIQTAITISGFSSE 341
Query: 241 HPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKW 300
HPD G++ A P + ++ V + + GI F +IC+++++L W
Sbjct: 342 HPDNGFNATAFPVVEKVTVRGVTGNTLDRPGRILGIPEVPFRDICLEDIALDATTGLTAW 401
Query: 301 QCQFVSGFTSQVFPLPCPQLQNKSS 325
+C V G++S V P C QL ++
Sbjct: 402 KCTDVEGYSSSVTPKICSQLSENNT 426
>gi|125526876|gb|EAY74990.1| hypothetical protein OsI_02888 [Oryza sativa Indica Group]
Length = 445
Score = 347 bits (889), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 170/330 (51%), Positives = 238/330 (72%), Gaps = 2/330 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
WP+I+PL SYGRGRE GGR++SLIHG+ L +V+ITG NGTIDGQG WWD+W TL
Sbjct: 116 SWPLIEPLLSYGRGRELPGGRYMSLIHGNGLQDVVITGDNGTIDGQGSAWWDMWKKGTLP 175
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
TR HL+ELMNS+++++SN+ F++SPFW IHPVYC NVVI+ +T+LAP ++PNTDGIDPD
Sbjct: 176 FTRPHLLELMNSSDVVVSNVVFQDSPFWNIHPVYCSNVVIRNVTVLAPHDSPNTDGIDPD 235
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SS+NVCIEDCYI +GDDL+A+KSGWD YG+A RPSS+I +RR++G++P +G +GSE
Sbjct: 236 SSSNVCIEDCYISTGDDLIAIKSGWDEYGMAYGRPSSHITIRRITGSSP-FAGFAVGSET 294
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGG+ +V + L+ + + G+ IKT+ GRGG+I N+T+ ++ ++ V+ +RI+ HP
Sbjct: 295 SGGVEHVLAEHLNFFSSGFGIHIKTNTGRGGFIRNVTVSDVTLDSVRYGLRIAGDVGGHP 354
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQC 302
D+ +D ALP + G++ NV N +A + GI + F IC+ NV L G A W+C
Sbjct: 355 DDRYDRNALPVVDGLTIKNVQGQNIREAGSIKGIATSAFSRICLSNVKLNGGAAVRPWKC 414
Query: 303 QFVSGFTSQVFPLPCPQLQNKSS-SWCSFS 331
+ VSG V P PC +L + S S+C+ S
Sbjct: 415 EAVSGAALDVQPSPCTELTSTSGMSFCTNS 444
>gi|413948635|gb|AFW81284.1| hypothetical protein ZEAMMB73_960645 [Zea mays]
Length = 458
Score = 346 bits (887), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 164/326 (50%), Positives = 223/326 (68%), Gaps = 3/326 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
WP+IDPLPSYGRGRE GGR++SLIHG L +V ITG NGTIDGQG +WWD+W RTL
Sbjct: 130 SWPLIDPLPSYGRGRELPGGRYMSLIHGHGLQDVFITGENGTIDGQGGVWWDMWKKRTLP 189
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
TR HL+ELM S ++++SNL F++SPFW IHPVYC NVVI +T+LAP ++PNTDGID D
Sbjct: 190 FTRPHLLELMYSTDVVVSNLVFQDSPFWNIHPVYCSNVVIANLTVLAPHDSPNTDGIDLD 249
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SS+NVC+EDCYI +GDDL+++KSGWD YG+A RPSS I VRR++G+ P +G +GSE
Sbjct: 250 SSSNVCVEDCYISAGDDLISIKSGWDEYGVAFGRPSSGITVRRITGSGP-FAGFAVGSET 308
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGG+ +V + L GV +KT+ GRGG+I N+T+ + ++ + +RI+ HP
Sbjct: 309 SGGVEDVVAEHLSFSGVGVGVHVKTNSGRGGFIRNVTVSQVTLDGARYGLRIAGDVGGHP 368
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSA--KW 300
++ LP I G++ NV N +A ++ GI + F IC+ NV L G+ + W
Sbjct: 369 GASYNASLLPVIDGVAVRNVWGRNVRQAGLIRGIRDSVFSNICLSNVKLYGIGSDSIGPW 428
Query: 301 QCQFVSGFTSQVFPLPCPQLQNKSSS 326
+C+ VSG V P PC +L + S +
Sbjct: 429 RCRAVSGSALDVQPSPCAELASTSGT 454
>gi|449530307|ref|XP_004172137.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 493
Score = 345 bits (886), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 171/335 (51%), Positives = 234/335 (69%), Gaps = 7/335 (2%)
Query: 2 DEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTL 61
+EWP+++PLPSYG GR+ GGR+ISLI G +LT+V+ITG NGTIDGQG WW L+ L
Sbjct: 138 NEWPVVEPLPSYGHGRDTSGGRYISLIFGTNLTDVVITGNNGTIDGQGDRWWQLFHQGKL 197
Query: 62 KHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDP 121
K+TR +L+ELM S++I IS+LT NSP W +HPVY N++I+G+TI+AP+ +PNTDGI+P
Sbjct: 198 KYTRPYLIELMYSSDIQISSLTLLNSPAWNVHPVYSSNILIQGITIIAPVRSPNTDGINP 257
Query: 122 DSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSE 181
DS TNV IEDCYI SGDD VAVKSGWD YGI+ P+ ++VRR++ +PT + + +GSE
Sbjct: 258 DSCTNVRIEDCYIVSGDDCVAVKSGWDEYGISFGLPTKQLVVRRLTCISPTSAVIALGSE 317
Query: 182 MSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDH 241
MSGGI +V + + D+ +GVRIKT GRGGY+++I +R + M +K ++ H
Sbjct: 318 MSGGIEDVRAEDIVAIDSESGVRIKTGIGRGGYVKDIYVRRMTMHTMKWAFWMTGDYGSH 377
Query: 242 PDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAK-- 299
D+ +DP ALP I+GI++ ++V N T A L GI G F +IC+ NV+ +GLAP AK
Sbjct: 378 ADKNYDPHALPVIQGINYKDMVVENATMAARLEGISGDTFTDICISNVT-IGLAPKAKKQ 436
Query: 300 -WQCQFVSGFTSQVFPLPCPQLQNKSS---SWCSF 330
W C + G TSQV P PC L ++ + C F
Sbjct: 437 PWTCTDIEGITSQVTPPPCDLLPDQGEEKITTCKF 471
>gi|449432134|ref|XP_004133855.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 493
Score = 345 bits (885), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 171/335 (51%), Positives = 234/335 (69%), Gaps = 7/335 (2%)
Query: 2 DEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTL 61
+EWP+++PLPSYG GR+ GGR+ISLI G +LT+V+ITG NGTIDGQG WW L+ L
Sbjct: 138 NEWPVVEPLPSYGHGRDTSGGRYISLIFGTNLTDVVITGNNGTIDGQGDRWWQLFHQGKL 197
Query: 62 KHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDP 121
K+TR +L+ELM S++I IS+LT NSP W +HPVY N++I+G+TI+AP+ +PNTDGI+P
Sbjct: 198 KYTRPYLIELMYSSDIQISSLTLLNSPAWNVHPVYSSNILIQGITIIAPVRSPNTDGINP 257
Query: 122 DSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSE 181
DS TNV IEDCYI SGDD VAVKSGWD YGI+ P+ ++VRR++ +PT + + +GSE
Sbjct: 258 DSCTNVRIEDCYIVSGDDCVAVKSGWDEYGISFGLPTKQLVVRRLTCISPTSAVIALGSE 317
Query: 182 MSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDH 241
MSGGI +V + + D+ +GVRIKT GRGGY+++I +R + M +K ++ H
Sbjct: 318 MSGGIEDVRAEDIVAIDSESGVRIKTGIGRGGYVKDIYVRRMTMHTMKWAFWMTGDYGSH 377
Query: 242 PDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAK-- 299
D+ +DP ALP I+GI++ ++V N T A L GI G F +IC+ NV+ +GLAP AK
Sbjct: 378 ADKNYDPHALPVIQGINYKDMVVENATMAARLEGISGDTFTDICISNVT-IGLAPKAKKQ 436
Query: 300 -WQCQFVSGFTSQVFPLPCPQLQNKSS---SWCSF 330
W C + G TSQV P PC L ++ + C F
Sbjct: 437 PWTCTDIEGITSQVTPPPCDLLPDQGEEKITTCKF 471
>gi|356554060|ref|XP_003545367.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 446
Score = 344 bits (883), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 173/328 (52%), Positives = 240/328 (73%), Gaps = 3/328 (0%)
Query: 4 WPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKH 63
WP+I PLPSYGRGRER GGR++S IHGD + +V+ITG NGTIDGQG WW+ W TL+
Sbjct: 117 WPLIAPLPSYGRGRERPGGRYMSFIHGDGVQDVVITGENGTIDGQGDAWWNKWRQGTLQF 176
Query: 64 TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDS 123
TR +LVE +NS +I+ISN+ F+NSPFW IHPVYC NVV++ +TILAP ++PNTDGIDPDS
Sbjct: 177 TRPNLVEFVNSRDIIISNVIFKNSPFWNIHPVYCSNVVVRYVTILAPRDSPNTDGIDPDS 236
Query: 124 STNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMS 183
S+NVCIED YI +GDDLVAVKSGWD YGIA RPSS+I +RR++G++P +G+ IGSE S
Sbjct: 237 SSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRPSSDITIRRITGSSP-FAGIAIGSETS 295
Query: 184 GGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPD 243
GG+ NV + +++++ G+ IKT+ GRGG+I+NIT+ ++ ME + IRIS DHPD
Sbjct: 296 GGVENVLAEHINLYNMGIGIHIKTNTGRGGFIKNITMSHVYMEEARKGIRISGDVGDHPD 355
Query: 244 EGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLA--PSAKWQ 301
+ +D ALP ++G++ NV + +A ++ G+ + F +IC+ +++L G+ + W+
Sbjct: 356 DKFDANALPLVKGVTIKNVWGMKVLQAGLIQGLRNSPFTDICLYDINLHGVTGPRTPPWK 415
Query: 302 CQFVSGFTSQVFPLPCPQLQNKSSSWCS 329
C VSGF QV P PC +L + C+
Sbjct: 416 CSDVSGFAHQVSPWPCSELSSNQQGSCA 443
>gi|242061204|ref|XP_002451891.1| hypothetical protein SORBIDRAFT_04g009310 [Sorghum bicolor]
gi|241931722|gb|EES04867.1| hypothetical protein SORBIDRAFT_04g009310 [Sorghum bicolor]
Length = 448
Score = 344 bits (883), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 171/326 (52%), Positives = 222/326 (68%), Gaps = 3/326 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
WP+++PLPSYGRGRE G R+ S IHG+ L +V ITG G IDGQG++WW++W RTL+
Sbjct: 118 RWPLMEPLPSYGRGRELPGARYASFIHGNGLRDVAITGDKGVIDGQGEVWWNMWRRRTLE 177
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
HTR +LVE M+S I ISN+ +NSPFW IHPVYC NVV+ M ILAP ++PNTDGIDPD
Sbjct: 178 HTRPNLVEFMHSTGIHISNIVLKNSPFWNIHPVYCDNVVVTNMMILAPHDSPNTDGIDPD 237
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SS+NVCIED YI +GDDLVA+KSGWD YGIA RPSS I +RRV G++P SG+ IGSE
Sbjct: 238 SSSNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPSSGITIRRVRGSSP-FSGIAIGSEA 296
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIP-IRISRGSNDH 241
SGG+ +V V+ ++D+ G+ IKT+ GRGGYI N+T+ N++M V+I +RI+ DH
Sbjct: 297 SGGVRDVLVEDCSIFDSGYGIHIKTNVGRGGYIRNVTVDNVRMSGVRISGVRIAGDVGDH 356
Query: 242 PDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPS-AKW 300
PD + A+P + + NV VN L GI + F IC+ NV L G + A W
Sbjct: 357 PDAHFSQLAVPLVDAVRISNVWGVNVQHPGSLEGIRSSPFTRICLSNVKLFGWRKNDAAW 416
Query: 301 QCQFVSGFTSQVFPLPCPQLQNKSSS 326
+C+ V G V P PC +L +S
Sbjct: 417 RCRDVRGAALGVQPSPCAELATSFAS 442
>gi|357494037|ref|XP_003617307.1| Glycoside hydrolase family 28 protein [Medicago truncatula]
gi|355518642|gb|AET00266.1| Glycoside hydrolase family 28 protein [Medicago truncatula]
Length = 450
Score = 344 bits (882), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 175/330 (53%), Positives = 239/330 (72%), Gaps = 5/330 (1%)
Query: 4 WPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKH 63
WP+I PLPSYGRGRER GGR++S IHGD L +V+ITG NGTIDGQG +WW++W RTL+
Sbjct: 119 WPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGDVWWNMWRKRTLQF 178
Query: 64 TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDS 123
TR +LVE +NS +I+ISN+ F++SPFW IHPVYC NVVI+ TILAP ++PNTDGIDPDS
Sbjct: 179 TRPNLVEFVNSKDIIISNVIFKDSPFWNIHPVYCSNVVIRFATILAPRDSPNTDGIDPDS 238
Query: 124 STNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMS 183
S+NVCIED YI +GDDLVAVKSGWD YGIA R SSNI +RRVSG++P +G+ +GSE S
Sbjct: 239 SSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRSSSNITIRRVSGSSP-FAGIAVGSETS 297
Query: 184 GGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPD 243
GG+ N+ + +++++ G+ IKT+ GRGGYI+NI + N+ +E + I+IS DH D
Sbjct: 298 GGVENILAEHINLYNMGIGIHIKTNIGRGGYIKNINVSNVYIENARKGIKISGDVGDHAD 357
Query: 244 EGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGL----APSAK 299
+ +D ALP ++GI+ NV V +A ++ G+ + F +IC+ +++L G+ + +
Sbjct: 358 DKYDSNALPIVKGITMANVWGVKVLQAGLIKGMKHSPFTDICLSDINLHGVNGTRSRTPS 417
Query: 300 WQCQFVSGFTSQVFPLPCPQLQNKSSSWCS 329
WQC VSG QV P PC +L + C+
Sbjct: 418 WQCSDVSGVALQVSPWPCSELISHQLGSCA 447
>gi|326521404|dbj|BAJ96905.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 476
Score = 343 bits (881), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 173/319 (54%), Positives = 226/319 (70%), Gaps = 1/319 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
+WP+IDPLPSYGRGRE GGRH SLI G +LT+VIITG NGTIDGQG WWD + N TL
Sbjct: 116 DWPVIDPLPSYGRGRELPGGRHQSLIFGSNLTDVIITGANGTIDGQGAYWWDWFHNHTLN 175
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+TR HLVELM S +++ISNLTF+NSPFW IHPVYC V+++ +TILAPL++PNTDGI+PD
Sbjct: 176 YTRPHLVELMYSTSVVISNLTFKNSPFWNIHPVYCSQVIVEHVTILAPLDSPNTDGINPD 235
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SSTNVCI CY+ +GDD++ +KSGWD YGI+ A+ SSNI + ++G T +G+ IGSEM
Sbjct: 236 SSTNVCISHCYVRNGDDVIVIKSGWDEYGISFAQSSSNISISNITGETGGGAGIAIGSEM 295
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI V + L + ++ G+RIKT GRGGY+ N+ I ++ M V + IRI+ +HP
Sbjct: 296 SGGISEVRAEGLRIVNSLHGIRIKTAPGRGGYVRNVYIADVSMHNVSMAIRITGNYGEHP 355
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQC 302
D +D ALP I I+ NVV ++ A +L GI G F IC+ NVS L + P W C
Sbjct: 356 DSKYDKNALPIISNITIENVVGIDVGVAGILEGIEGDNFSSICISNVS-LSVRPRYPWNC 414
Query: 303 QFVSGFTSQVFPLPCPQLQ 321
+ G+++ V P C QL+
Sbjct: 415 SRIQGYSNSVTPESCEQLK 433
>gi|226509250|ref|NP_001149385.1| LOC100283011 precursor [Zea mays]
gi|195626846|gb|ACG35253.1| polygalacturonase [Zea mays]
Length = 446
Score = 343 bits (880), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 162/326 (49%), Positives = 222/326 (68%), Gaps = 3/326 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
WP+IDPLP YGRGRE GGR++SLIHG L +V ITG NGTIDGQG +WWD+W RTL
Sbjct: 118 SWPLIDPLPXYGRGRELPGGRYMSLIHGHGLQDVFITGENGTIDGQGGVWWDMWKKRTLP 177
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
TR HL+ELM S ++++SNL F++SPFW IHPVYC NVVI +T+LAP ++PNTDGID D
Sbjct: 178 FTRPHLLELMYSTDVVVSNLVFQDSPFWNIHPVYCSNVVIANLTVLAPHDSPNTDGIDLD 237
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SS+NVC+EDCYI +GDDL+++KSGWD YG+A RPSS I VRR++G+ P +G +GSE
Sbjct: 238 SSSNVCVEDCYISAGDDLISIKSGWDEYGVAFGRPSSGITVRRITGSGP-FAGFAVGSET 296
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGG+ +V + L GV +KT+ GRGG+I N+T+ + ++ + +RI+ HP
Sbjct: 297 SGGVEDVVAEHLSFSGVGVGVHVKTNSGRGGFIRNVTVSQVTLDGARYGLRIAGDVGGHP 356
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSA--KW 300
++ LP + G++ NV N +A ++ GI + F IC+ NV L G+ + W
Sbjct: 357 GASYNASLLPVVDGVAVRNVWGRNVRQAGLIRGIRDSVFSNICLSNVKLYGIGSDSIGPW 416
Query: 301 QCQFVSGFTSQVFPLPCPQLQNKSSS 326
+C+ VSG V P PC +L + S +
Sbjct: 417 RCRAVSGSALDVQPSPCAELASTSGT 442
>gi|356499323|ref|XP_003518491.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like
[Glycine max]
Length = 445
Score = 343 bits (879), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 163/307 (53%), Positives = 223/307 (72%), Gaps = 3/307 (0%)
Query: 4 WPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKH 63
WP+I PLPSYGRGRER GR++S IHGD + +V+ITG NGTIDGQG WW+ W RTL+
Sbjct: 138 WPLIAPLPSYGRGRERPAGRYMSFIHGDGVXDVVITGENGTIDGQGDEWWNKWKQRTLQF 197
Query: 64 TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDS 123
TR +LVE +NS +I+ISN+ F++SPFW IHP C NVV++ +TILAP ++PNTDGIDP S
Sbjct: 198 TRPNLVEFVNSRDIIISNVIFKSSPFWNIHPFLCSNVVVRYVTILAPRDSPNTDGIDPHS 257
Query: 124 STNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMS 183
S+NVCIED YI +GDDLVA KSGWD YGI RPSS+I +RRV+G++P +G+ IGSE S
Sbjct: 258 SSNVCIEDSYISTGDDLVAEKSGWDEYGIVYGRPSSDITIRRVTGSSP-FAGIAIGSETS 316
Query: 184 GGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPD 243
GG+ NV + +++++ G+ IKT+ GR GYI+NIT+ ++ ME + IRIS DHPD
Sbjct: 317 GGVENVLSEHINLYNMGIGIHIKTNTGRAGYIKNITMSHVYMEEARKGIRISGDVGDHPD 376
Query: 244 EGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLA--PSAKWQ 301
+ +DP ALP ++G++ NV V +A ++ G+ F +IC +++L G+ + W+
Sbjct: 377 DKYDPNALPLVKGVTIKNVWGVKVLQAGLIQGLSSXPFRDICQYDINLHGVTGPRTPPWK 436
Query: 302 CQFVSGF 308
C VSGF
Sbjct: 437 CTDVSGF 443
>gi|148909907|gb|ABR18040.1| unknown [Picea sitchensis]
Length = 472
Score = 342 bits (876), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 160/332 (48%), Positives = 232/332 (69%), Gaps = 2/332 (0%)
Query: 1 MDEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRT 60
+++WP+I PLPSYG GR+ G R+ SLI+G +LT+V+ITG NGTIDGQG +WW + +
Sbjct: 117 LEDWPLIPPLPSYGMGRDAPGPRYSSLINGYNLTDVVITGDNGTIDGQGAIWWQKFHKKI 176
Query: 61 LKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGID 120
LK+TRG+LVELM S +I+ISNLTF NSP W +HPVY N++I+ +TILAPL++PNTDGID
Sbjct: 177 LKNTRGYLVELMYSKDIIISNLTFLNSPAWNLHPVYSSNILIQYVTILAPLDSPNTDGID 236
Query: 121 PDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGS 180
PDS + V IEDCY+ SGDD+VA+KSGWD YGI+ PS +I++RR+ G +PT + + +GS
Sbjct: 237 PDSCSYVRIEDCYVVSGDDIVAIKSGWDEYGISFGMPSQHIVIRRLVGISPTSAIIALGS 296
Query: 181 EMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSND 240
EMSGGI +V + + ++ G+RIKT GRGG++++I + + M +K ++
Sbjct: 297 EMSGGIQDVRAEDIQAINSETGIRIKTSPGRGGFVKDIFVNRMTMVNMKWAFTMTGSYGS 356
Query: 241 HPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAK- 299
HPD +DP ALP + IS+ N+V+ N + A L GI F++IC+ NV++ A S K
Sbjct: 357 HPDNKYDPNALPAVERISYSNIVATNVSVAGKLDGIANAPFKDICLTNVTITMAAKSKKY 416
Query: 300 -WQCQFVSGFTSQVFPLPCPQLQNKSSSWCSF 330
W C ++ G ++ V+P PC L+ + + +F
Sbjct: 417 PWNCTYIHGLSNAVYPQPCSLLEERPAEGDAF 448
>gi|388512935|gb|AFK44529.1| unknown [Lotus japonicus]
Length = 469
Score = 341 bits (875), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 170/335 (50%), Positives = 231/335 (68%), Gaps = 7/335 (2%)
Query: 2 DEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTL 61
+EWP+IDPLPSYGRGR+ GGR SLI G HLT+VIITG NGT+DGQG +WW + N+ L
Sbjct: 115 NEWPVIDPLPSYGRGRDTQGGRFSSLIFGTHLTDVIITGDNGTLDGQGDLWWKKFHNKQL 174
Query: 62 KHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDP 121
++TR +L+E+M S+N+ ISNLT NSP W IHPVYC NV+++G+TILAP+ +PNTDGI+P
Sbjct: 175 QYTRPYLIEIMYSDNVQISNLTLVNSPSWNIHPVYCSNVIVQGITILAPVTSPNTDGINP 234
Query: 122 DSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSE 181
DS TN IEDCYI SGDD VAVKSGWD YGI+ P+ ++++RR++ +PT + + +GSE
Sbjct: 235 DSCTNTRIEDCYIVSGDDCVAVKSGWDEYGISYGMPTKHLVIRRLTCISPTSAVIALGSE 294
Query: 182 MSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDH 241
MSGGI +V + + ++ +GVRIKT GRGGY+ +I +R + M+ +K ++ H
Sbjct: 295 MSGGIEDVRAEDILAINSESGVRIKTAVGRGGYVRDIYVRRMTMKTMKWVFWMTGDYGSH 354
Query: 242 PDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAK-- 299
D +DP A+P I I++ ++V+ N T A L GI G F IC+ NV+ + LA AK
Sbjct: 355 ADNNYDPNAIPVIENINYRDMVAENVTMAARLGGISGAPFTGICISNVT-IELAKKAKKV 413
Query: 300 -WQCQFVSGFTSQVFPLPCPQLQNKSSS---WCSF 330
W C VSG +S V P PC L ++ CSF
Sbjct: 414 PWTCTDVSGISSGVTPEPCELLPGQAEEKFGACSF 448
>gi|388499792|gb|AFK37962.1| unknown [Lotus japonicus]
Length = 469
Score = 341 bits (875), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 170/335 (50%), Positives = 231/335 (68%), Gaps = 7/335 (2%)
Query: 2 DEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTL 61
+EWP+IDPLPSYGRGR+ GGR SLI G HLT+VIITG NGT+DGQG +WW + N+ L
Sbjct: 115 NEWPVIDPLPSYGRGRDTQGGRFSSLIFGTHLTDVIITGDNGTLDGQGDLWWKKFHNKQL 174
Query: 62 KHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDP 121
++TR +L+E+M S+N+ ISNLT NSP W IHPVYC NV+++G+TILAP+ +PNTDGI+P
Sbjct: 175 QYTRPYLIEIMYSDNVQISNLTLVNSPSWNIHPVYCSNVIVQGITILAPVTSPNTDGINP 234
Query: 122 DSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSE 181
DS TN IEDCYI SGDD VAVKSGWD YGI+ P+ ++++RR++ +PT + + +GSE
Sbjct: 235 DSCTNTRIEDCYIVSGDDCVAVKSGWDEYGISYGMPTKHLVIRRLTCISPTSAVIALGSE 294
Query: 182 MSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDH 241
MSGGI +V + + ++ +GVRIKT GRGGY+ +I +R + M+ +K ++ H
Sbjct: 295 MSGGIEDVRAEDILAINSESGVRIKTAVGRGGYVRDIYVRRMTMKTMKWVFWMTGDYGSH 354
Query: 242 PDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAK-- 299
D +DP A+P I I++ ++V+ N T A L GI G F IC+ NV+ + LA AK
Sbjct: 355 ADNNYDPNAIPVIENINYRDMVAENVTMAARLEGISGAPFTGICISNVT-IELAKKAKKV 413
Query: 300 -WQCQFVSGFTSQVFPLPCPQLQNKSSS---WCSF 330
W C VSG +S V P PC L ++ CSF
Sbjct: 414 PWTCTDVSGISSGVTPEPCELLPGQAEEKFGACSF 448
>gi|255537567|ref|XP_002509850.1| polygalacturonase, putative [Ricinus communis]
gi|223549749|gb|EEF51237.1| polygalacturonase, putative [Ricinus communis]
Length = 480
Score = 341 bits (874), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 167/334 (50%), Positives = 229/334 (68%), Gaps = 7/334 (2%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
EWP+I+PLPSYGRGR+ GGR+ SLI G +LT+V+ITG NGTIDGQG +WW + N +
Sbjct: 126 EWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGANGTIDGQGDLWWKKFHNGEIN 185
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+TR +L+E+M SNNI ISNLT NSP W IHP Y NVV++G+TILAP+N+PNTDGI+PD
Sbjct: 186 YTRPYLIEIMYSNNIQISNLTLMNSPSWNIHPTYSSNVVVQGITILAPVNSPNTDGINPD 245
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S TN IEDCYI SGDD VAVKSGWD YGI+ P+ +++RR++ +PT + + +GSEM
Sbjct: 246 SCTNTRIEDCYIVSGDDCVAVKSGWDEYGISFGMPTKQLVIRRLTCISPTSAAIALGSEM 305
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI +V + + + +GVRIKT GRGGY+++I +R + M +K ++ HP
Sbjct: 306 SGGIQDVRAEDITCINTESGVRIKTSVGRGGYVKDIYVRKMTMHTMKWVFWMTGNYGSHP 365
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAK--- 299
D +DP A+P I I++ ++V+ N T A L GI G F IC+ NV+ +GLA K
Sbjct: 366 DNNYDPNAIPVIENINYRDIVAENVTMAARLEGIAGDPFTGICISNVT-IGLAQKPKKLQ 424
Query: 300 WQCQFVSGFTSQVFPLPC---PQLQNKSSSWCSF 330
W C ++G +S V P PC P+ + + + C+F
Sbjct: 425 WNCTDIAGISSGVTPKPCSLLPEQEKEKIADCNF 458
>gi|224071986|ref|XP_002303605.1| predicted protein [Populus trichocarpa]
gi|222841037|gb|EEE78584.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 341 bits (874), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 167/324 (51%), Positives = 229/324 (70%), Gaps = 4/324 (1%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
E+P+I+PLPSYGRGR+ G R+ SLI G++LT+VIITG NGTIDGQG++WW + L
Sbjct: 117 EYPLIEPLPSYGRGRDADGARYSSLIFGNNLTDVIITGANGTIDGQGELWWTKFRAGELN 176
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
HTR +L+E+M S NI ISNLT NSP W +HPVYC NVV++G+TILAP+ +PNTDGI+PD
Sbjct: 177 HTRPYLIEIMFSTNIQISNLTLINSPSWNVHPVYCSNVVVQGLTILAPVRSPNTDGINPD 236
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S TN I+DCYI SGDD VAVKSGWD YGIA P+ +++RR++ +PT + + +GSEM
Sbjct: 237 SCTNTKIQDCYIVSGDDCVAVKSGWDEYGIAFGMPTKQVVIRRLTCISPTSAVIALGSEM 296
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI +V + + D+ +GVRIKT GRGGY+++I +R + ++ +K ++ HP
Sbjct: 297 SGGIEDVRAEDITAIDSESGVRIKTAVGRGGYVKDIYVRGMTLKTMKWVFWMTGNYGSHP 356
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAK--- 299
D +DP A+P I+ I++ +VV+ N T A L GI G F IC+ NV+ +GLA + K
Sbjct: 357 DNNYDPNAIPVIQNINYRDVVAENVTMAARLEGIAGDPFTGICISNVT-IGLARNRKKLQ 415
Query: 300 WQCQFVSGFTSQVFPLPCPQLQNK 323
W C V+G TS+V P PC L ++
Sbjct: 416 WNCSDVAGITSEVTPKPCDLLSDQ 439
>gi|326496208|dbj|BAJ94566.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 476
Score = 340 bits (873), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 172/319 (53%), Positives = 225/319 (70%), Gaps = 1/319 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
+WP+IDPLPSYGRGRE GGRH SLI G +LT+VIITG NGTIDGQG WWD + N TL
Sbjct: 116 DWPVIDPLPSYGRGRELPGGRHQSLIFGSNLTDVIITGANGTIDGQGAYWWDWFHNHTLN 175
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+TR HLVELM S +++ISNLTF+NSPFW IHPVYC V+++ +TILAPL++PNTDGI+PD
Sbjct: 176 YTRPHLVELMYSTSVVISNLTFKNSPFWNIHPVYCSQVIVEHVTILAPLDSPNTDGINPD 235
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SSTNVCI CY+ +GDD++ +KSGWD YGI+ A+ SSNI + ++G T +G+ IGSEM
Sbjct: 236 SSTNVCISHCYVRNGDDVIVIKSGWDEYGISFAQSSSNISISNITGETGGGAGIAIGSEM 295
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI V + L + ++ G+RIKT GRGGY+ N+ I ++ M V + IRI+ +HP
Sbjct: 296 SGGISEVRAEGLRIVNSLHGIRIKTAPGRGGYVRNVYIADVSMHNVSMAIRITGNYGEHP 355
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQC 302
D +D ALP I I+ NVV ++ A +L GI G F IC+ NVS L + W C
Sbjct: 356 DSKYDKNALPIISNITIENVVGIDVGVAGILEGIEGDNFSSICISNVS-LSVRSRYPWNC 414
Query: 303 QFVSGFTSQVFPLPCPQLQ 321
+ G+++ V P C QL+
Sbjct: 415 SRIQGYSNSVTPESCEQLK 433
>gi|55295844|dbj|BAD67712.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|125553735|gb|EAY99340.1| hypothetical protein OsI_21311 [Oryza sativa Indica Group]
gi|125595774|gb|EAZ35554.1| hypothetical protein OsJ_19837 [Oryza sativa Japonica Group]
Length = 485
Score = 340 bits (873), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 166/333 (49%), Positives = 230/333 (69%), Gaps = 4/333 (1%)
Query: 1 MDEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRT 60
M EWPIIDPLPSYGRGR++ GGR+ SLI G +LT+V+ITG NGTIDGQG MWW + +
Sbjct: 131 MGEWPIIDPLPSYGRGRDKAGGRYASLIGGSNLTDVVITGANGTIDGQGAMWWSKFHSNK 190
Query: 61 LKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGID 120
LK+TRG+L+E+M+S+ ++ISN+T NSP W IHPVY N+V++G+TILAP ++PNTDGI+
Sbjct: 191 LKYTRGYLIEVMHSDTVVISNVTLVNSPAWNIHPVYSSNIVVQGVTILAPTHSPNTDGIN 250
Query: 121 PDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGS 180
PDS ++V IEDCYI SGDD VA+KSGWD YGIA PS +I+VRR++ +PT + + +GS
Sbjct: 251 PDSCSHVRIEDCYIVSGDDCVAIKSGWDEYGIAYGMPSQHIVVRRLTCVSPTSAVIALGS 310
Query: 181 EMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSND 240
EMSGGI +V + + ++ + VRIKT GRG Y+ ++ +R + ++ +K ++
Sbjct: 311 EMSGGISDVRAEDITAVNSESAVRIKTAVGRGAYVRDVFVRGMSLDTMKWVFWMTGNYKS 370
Query: 241 HPDEGWDPKALPKIRGISFVNVVSVNTTK-APVLAGIIGTQFEEICMKNVSLLGLAPSAK 299
HPD+G+DP A+P + IS+ +VV+ K A L GI G F IC+ NV+ L+ S K
Sbjct: 371 HPDDGYDPNAIPVVDNISYQDVVATGVYKEAARLEGIQGAPFRGICIANVTAT-LSKSRK 429
Query: 300 --WQCQFVSGFTSQVFPLPCPQLQNKSSSWCSF 330
W C + G ++ V P PC LQ C F
Sbjct: 430 YPWTCTDIEGVSTGVTPAPCQPLQGAHDGACPF 462
>gi|224075086|ref|XP_002304552.1| predicted protein [Populus trichocarpa]
gi|222841984|gb|EEE79531.1| predicted protein [Populus trichocarpa]
Length = 412
Score = 340 bits (872), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 177/319 (55%), Positives = 237/319 (74%), Gaps = 3/319 (0%)
Query: 4 WPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKH 63
WP+I PLPSYGRGRERLGGR++S IHGD L +VIITG NGTIDGQG +WW++W RTL
Sbjct: 82 WPLIAPLPSYGRGRERLGGRYMSFIHGDGLQDVIITGENGTIDGQGDVWWNMWRQRTLLF 141
Query: 64 TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDS 123
TR +LVE +NS I+ISN+ FRNSPFW IHPVY RNVVI+ +TILAPL++PNTDGIDPDS
Sbjct: 142 TRPNLVEFVNSRGIIISNVIFRNSPFWNIHPVYSRNVVIRYVTILAPLDSPNTDGIDPDS 201
Query: 124 STNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMS 183
S+NVCIED YI +GDDLVAVKSGWD YGIA RPSS+I +RR++G++P SG+ +GSE S
Sbjct: 202 SSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRPSSDITIRRITGSSP-FSGIAVGSETS 260
Query: 184 GGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPD 243
GG+ NV V+ +++++ G+ IKT+ GRGG+I+NIT+ ++ ME V+ I+I+ DHPD
Sbjct: 261 GGVKNVLVENVNLYNMGVGIHIKTNIGRGGFIKNITVTDVYMENVRKGIKIAGDVGDHPD 320
Query: 244 EGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGL--APSAKWQ 301
+ ++P ALP + GI+ ++ + + G+ + F IC+ N++L G+ S+ W+
Sbjct: 321 DSFNPNALPVVYGITLKSIWGEKVQQPGSIQGLKNSPFTGICLSNINLHGVPGPRSSPWK 380
Query: 302 CQFVSGFTSQVFPLPCPQL 320
C VSG V P PC +L
Sbjct: 381 CSDVSGSALLVSPWPCSEL 399
>gi|168046254|ref|XP_001775589.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673007|gb|EDQ59536.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 483
Score = 339 bits (870), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 168/327 (51%), Positives = 222/327 (67%), Gaps = 1/327 (0%)
Query: 1 MDEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRT 60
+++P+I LPSYGRGRE G R+ SLI+GD L +VIITG NGTIDGQG +WW + ++T
Sbjct: 156 FNDYPLIPGLPSYGRGRELPGSRYSSLINGDGLEDVIITGNNGTIDGQGAVWWSSFRSKT 215
Query: 61 LKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGID 120
L+HTRGHL+EL+ + +ILISNLTF+NSPFWTIHPVY +NVV+K +TIL PLN+PNTDGID
Sbjct: 216 LEHTRGHLLELIEAQDILISNLTFQNSPFWTIHPVYSKNVVVKRVTILNPLNSPNTDGID 275
Query: 121 PDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGS 180
PDSS VCIEDCYI GDD +++KSGWD YG PS I ++RV + T +G+ GS
Sbjct: 276 PDSSQYVCIEDCYISVGDDAISIKSGWDQYGTGFGMPSKYIRIQRVVAFSHTSAGISFGS 335
Query: 181 EMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSND 240
EMSGGI ++ VD + + ++ GVR KT GRG YI N+T+ NI M V+ I + +
Sbjct: 336 EMSGGISDIEVDDMVITNSRWGVRFKTSVGRGAYIRNVTVNNIVMHTVRTAIAVMGNYGE 395
Query: 241 HPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL-LGLAPSAK 299
HPDE W+ A P I I N+V N T+A +L G+ F +I + V L
Sbjct: 396 HPDENWNRTAYPVIENILVGNIVGENITQAGLLLGLPDAPFHDIHLTKVVLDTRTTKQGP 455
Query: 300 WQCQFVSGFTSQVFPLPCPQLQNKSSS 326
W C +V+GF + V P PCP+L ++S+
Sbjct: 456 WNCSWVTGFYNFVLPKPCPELTMENSN 482
>gi|242094380|ref|XP_002437680.1| hypothetical protein SORBIDRAFT_10g000660 [Sorghum bicolor]
gi|241915903|gb|EER89047.1| hypothetical protein SORBIDRAFT_10g000660 [Sorghum bicolor]
Length = 495
Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 165/332 (49%), Positives = 227/332 (68%), Gaps = 2/332 (0%)
Query: 1 MDEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRT 60
++EWPIIDPLPSYGRGR+++GGR SL+ G +LT+V+ITG NGTIDGQG MWW +
Sbjct: 134 INEWPIIDPLPSYGRGRDKIGGRFASLVGGSNLTDVVITGNNGTIDGQGAMWWSKFHKNQ 193
Query: 61 LKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGID 120
LK+TRG+L+ELM+S+ I ISNLT NSP W IHPVY N+V++G+TILAP N+PNTDGI+
Sbjct: 194 LKYTRGYLIELMHSDTIYISNLTLLNSPAWNIHPVYSSNIVVQGITILAPTNSPNTDGIN 253
Query: 121 PDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGS 180
PDS ++V IEDCYI SGDD VA+KSGWD YGI+ PS +I++RR++ +PT + + +GS
Sbjct: 254 PDSCSHVRIEDCYIVSGDDCVAIKSGWDEYGISYGMPSQHIVIRRLTCVSPTSAVIALGS 313
Query: 181 EMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSND 240
EMSGGI +V + + ++ +GVRIKT GRG Y++++ +R + + +K ++
Sbjct: 314 EMSGGIQDVRAEDITAINSESGVRIKTAVGRGAYVKDVFVRRMTLTTMKWVFWMTGNYKS 373
Query: 241 HPDEGWDPKALPKIRGISFVNVVSVNTTK-APVLAGIIGTQFEEICMKNVSL-LGLAPSA 298
HPD+ +DP A+P + IS+ +VV+ K A L GI G F+ IC+ NV+ L +
Sbjct: 374 HPDDKYDPNAIPVVDNISYQDVVATGVYKEAARLEGIQGAPFKGICVANVTADLSKSRKY 433
Query: 299 KWQCQFVSGFTSQVFPLPCPQLQNKSSSWCSF 330
W C V G + V P PC LQ C F
Sbjct: 434 PWTCADVEGVSVNVSPAPCQPLQGAHDGACPF 465
>gi|357118995|ref|XP_003561232.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 512
Score = 339 bits (869), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 164/325 (50%), Positives = 222/325 (68%), Gaps = 2/325 (0%)
Query: 1 MDEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRT 60
+ EWP+I PLPSYGRGR+ GGR+ SLI G +LT+V+ITG NGTIDGQG WW + +
Sbjct: 146 ISEWPVIAPLPSYGRGRDHAGGRYTSLISGSNLTDVVITGNNGTIDGQGATWWSKYKSGK 205
Query: 61 LKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGID 120
LK+TRG+L+ELM+S+ I ISN+T NSP W IHPVY +N+VI+G+TILAP +PNTDGI+
Sbjct: 206 LKYTRGYLIELMSSDTIFISNVTLLNSPAWNIHPVYSKNIVIQGVTILAPTRSPNTDGIN 265
Query: 121 PDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGS 180
PDS + V IEDCY+ SGDD VA+KSGWD YGIA P+ ++IVRR++ +PT + V IGS
Sbjct: 266 PDSCSQVRIEDCYVVSGDDCVAIKSGWDEYGIAAGIPTEHVIVRRLTCVSPTSALVAIGS 325
Query: 181 EMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSND 240
EMSGG+ +V ++ + D + VRIKT GRG Y+++I R + + +K ++
Sbjct: 326 EMSGGVRDVRIEDVAAVDTESAVRIKTAVGRGAYVKDIYARRMTLTGMKRVFWMTGDYKS 385
Query: 241 HPDEGWDPKALPKIRGISFVNVVSVNTTK-APVLAGIIGTQFEEICMKNVSLLGLAP-SA 298
HPD+G+D A+P + G+SF +V + K A + GI G F+ ICM NV++ P
Sbjct: 386 HPDDGYDKTAVPVVEGVSFQDVAATGVWKEAARMEGISGAPFKGICMANVTMEMTKPRKV 445
Query: 299 KWQCQFVSGFTSQVFPLPCPQLQNK 323
W C V G ++ V P PC QLQ K
Sbjct: 446 MWNCADVEGVSTGVTPAPCGQLQQK 470
>gi|225426168|ref|XP_002278930.1| PREDICTED: probable polygalacturonase [Vitis vinifera]
Length = 480
Score = 339 bits (869), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 166/324 (51%), Positives = 228/324 (70%), Gaps = 4/324 (1%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
EWP+IDPLPSYGRGR+ GGR+ISLI G +LT+V+ITG NGTIDGQG +WW + LK
Sbjct: 126 EWPVIDPLPSYGRGRDTQGGRYISLIFGTNLTDVVITGENGTIDGQGALWWAKFHKGELK 185
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+TR +L+E+M+S+N+ IS+LT NSP W +HPVY NV+I+G+TI AP+ +PNTDGI+PD
Sbjct: 186 YTRPYLIEIMHSDNVQISSLTLVNSPSWNVHPVYSSNVIIQGLTITAPVTSPNTDGINPD 245
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S TN IEDCYI SGDD +AVKSGWD YGIA P+ +++RR++ +P + + +GSEM
Sbjct: 246 SCTNTRIEDCYIVSGDDCIAVKSGWDEYGIAYGMPTKQLVIRRLTCISPFSATIALGSEM 305
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI +V + + D +GVRIKT GRGGY+++I +R++ M+ +K ++ H
Sbjct: 306 SGGIEDVRAEDILAIDTESGVRIKTAVGRGGYVKDIYVRSMIMKTMKWAFWMTGNYGSHA 365
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAK--- 299
D +DP ALP I+GI++ ++V+ N T A L GI G F IC+ NV+ +GLA AK
Sbjct: 366 DNNYDPNALPAIQGINYRDMVAENVTMAGRLEGISGDPFTGICISNVT-IGLAKKAKKAP 424
Query: 300 WQCQFVSGFTSQVFPLPCPQLQNK 323
W C ++G TS V P PC L ++
Sbjct: 425 WTCTDIAGITSGVVPQPCDLLPDQ 448
>gi|242042413|ref|XP_002468601.1| hypothetical protein SORBIDRAFT_01g048880 [Sorghum bicolor]
gi|241922455|gb|EER95599.1| hypothetical protein SORBIDRAFT_01g048880 [Sorghum bicolor]
Length = 463
Score = 339 bits (869), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 167/333 (50%), Positives = 232/333 (69%), Gaps = 5/333 (1%)
Query: 1 MDEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRT 60
M+ WP+I PLPSYGRGR+ G R+I+ I G +LT+VIITG NGTI+GQGQ+WWD + +
Sbjct: 116 MNHWPLIAPLPSYGRGRDEPGPRYINFIGGSNLTDVIITGKNGTINGQGQVWWDKFHAKE 175
Query: 61 LKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGID 120
LK TRGHL+EL++S+NI+ISN+TF ++P+W +HP YC NV I G+TILAPLN+PNTDGID
Sbjct: 176 LKSTRGHLLELLHSDNIIISNVTFVDAPYWNLHPTYCTNVTISGVTILAPLNSPNTDGID 235
Query: 121 PDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGS 180
PDSST+V IEDCYI SGDD VAVKSGWD YGI PS +I++RR++ +PT + + +GS
Sbjct: 236 PDSSTHVKIEDCYIVSGDDCVAVKSGWDEYGIKFNMPSQHIVIRRLTCISPTSAMIALGS 295
Query: 181 EMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSND 240
EMSGGI +V + + + VRIK+ GRGG++++I +R + + +K ++
Sbjct: 296 EMSGGIRDVRAEDNIAINTESAVRIKSGAGRGGFVKDIFVRGLSLHTMKWVFWMTGNYGQ 355
Query: 241 HPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSA-- 298
HPD +P A+P++ GI++ +V + N T A + GI + IC+ NV+ LAP+A
Sbjct: 356 HPDNTSNPNAMPEVTGINYSDVFAENVTTAGRMEGIPNDPYTGICISNVT-ASLAPNATE 414
Query: 299 -KWQCQFVSGFTSQVFPLPCPQLQNKSSSWCSF 330
+W C V G TS V P PCP+L + C+F
Sbjct: 415 LQWNCTNVKGVTSNVSPKPCPELGAEGKP-CAF 446
>gi|224151097|ref|XP_002337059.1| predicted protein [Populus trichocarpa]
gi|222837934|gb|EEE76299.1| predicted protein [Populus trichocarpa]
Length = 356
Score = 338 bits (868), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 167/326 (51%), Positives = 229/326 (70%), Gaps = 4/326 (1%)
Query: 1 MDEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRT 60
M E+P+I+PLPSYGRGR+ G R SLI G++LT+V+ITG NGTIDGQG++WW +
Sbjct: 1 MIEYPLIEPLPSYGRGRDADGARFSSLIFGNNLTDVVITGANGTIDGQGELWWTKFRAGE 60
Query: 61 LKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGID 120
L HTR +L+E+M S NI ISNLT NSP W +HPVYC NVV++G+TILAP+ +PNTDGI+
Sbjct: 61 LNHTRPYLIEIMFSTNIQISNLTLINSPSWNVHPVYCSNVVVQGLTILAPVRSPNTDGIN 120
Query: 121 PDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGS 180
PDS TN I+DCYI SGDD VAVKSGWD YGIA P+ +++RR++ +PT + + +GS
Sbjct: 121 PDSCTNTKIQDCYIVSGDDCVAVKSGWDEYGIAFGMPTKQVVIRRLTCISPTSAVIALGS 180
Query: 181 EMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSND 240
EMSGGI +V + + D+ +GVRIKT GRGGY+++I +R + ++ +K ++
Sbjct: 181 EMSGGIEDVRAEDITAIDSESGVRIKTAVGRGGYVKDIYVRGMTLKTMKWVFWMTGNYGS 240
Query: 241 HPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAK- 299
HPD +DP A+P I+ I++ +VV+ N T A L GI G F IC+ NV+ +GLA + K
Sbjct: 241 HPDNNYDPNAIPVIQNINYRDVVAENVTMAARLEGIAGDPFTGICISNVT-IGLARNRKK 299
Query: 300 --WQCQFVSGFTSQVFPLPCPQLQNK 323
W C V+G TS+V P PC L ++
Sbjct: 300 LQWNCSDVAGITSEVTPKPCDLLSDQ 325
>gi|255537765|ref|XP_002509949.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223549848|gb|EEF51336.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 446
Score = 338 bits (867), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 172/319 (53%), Positives = 234/319 (73%), Gaps = 3/319 (0%)
Query: 4 WPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKH 63
WP+I PLPSYGRGRERLGGR++S IHGD L +V+ITG NGTIDGQG +WW++W RTL+
Sbjct: 116 WPLIAPLPSYGRGRERLGGRYMSFIHGDGLHDVVITGENGTIDGQGDIWWNMWRQRTLQF 175
Query: 64 TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDS 123
TR +LVE +NS I+ISN+ F+NSPFW IHPVYC NVVI+ +TILAP ++PNTDGIDPDS
Sbjct: 176 TRPNLVEFLNSRGIIISNVIFQNSPFWNIHPVYCSNVVIRFVTILAPHDSPNTDGIDPDS 235
Query: 124 STNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMS 183
S+NVCIED YI +GDDLVAVKSGWD YGIA RPSS+I +RR++G++P +G+ +GSE S
Sbjct: 236 SSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRPSSHITIRRITGSSP-FAGIAVGSETS 294
Query: 184 GGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPD 243
GG+ +V + ++++D G+ +KT+ GRGG+I NIT ++ M+ + I+I+ DHPD
Sbjct: 295 GGVEHVLAENINLYDMGVGLHVKTNIGRGGFIRNITFSDVYMKNARKGIKIAGDVGDHPD 354
Query: 244 EGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGL--APSAKWQ 301
+ ++P ALP ++GI F V N + + G+ + F IC+ N++L G+ S W+
Sbjct: 355 DNYNPNALPVVKGIIFRGVWGENVLQPGAIQGLKSSPFTGICLSNINLHGVPGPRSTPWK 414
Query: 302 CQFVSGFTSQVFPLPCPQL 320
C VSG +V P PC +L
Sbjct: 415 CSDVSGAALEVSPFPCSEL 433
>gi|224058441|ref|XP_002299511.1| predicted protein [Populus trichocarpa]
gi|222846769|gb|EEE84316.1| predicted protein [Populus trichocarpa]
Length = 481
Score = 338 bits (867), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 166/324 (51%), Positives = 230/324 (70%), Gaps = 4/324 (1%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
E+P+I+PLPSYGRGR+ G R+ SLI G++LT+VIITG NGTIDGQG++WW + L
Sbjct: 126 EYPLIEPLPSYGRGRDADGARYSSLIFGNNLTDVIITGANGTIDGQGELWWTKFRAGELN 185
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+TR +L+E+M S NI ISNLT NSP W +HPVYC NVV++G+TILAP+ +PNTDGI+PD
Sbjct: 186 YTRPYLIEIMFSTNIQISNLTLINSPSWNVHPVYCSNVVVQGLTILAPVRSPNTDGINPD 245
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S TN IEDCYI SGDD VAVKSGWD YGI+ P+ +++RR++ +PT + + +GSEM
Sbjct: 246 SCTNTRIEDCYIVSGDDCVAVKSGWDEYGISFGMPTKQLVIRRLTCISPTSAVIALGSEM 305
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI +V + + D+ +GVRIKT GRGGY+++I +R + ++ +K ++ HP
Sbjct: 306 SGGIEDVRAEDITAIDSESGVRIKTAVGRGGYVKDIYVRGMTLKTMKWVFWMTGNYGSHP 365
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAK--- 299
D +DP A+P I+ I++ +VV+ N T A L GI G F IC+ NV+ +GLA ++K
Sbjct: 366 DNNYDPNAIPVIQNINYRDVVAENVTMAAKLEGIAGDPFTGICISNVT-IGLAQNSKKLQ 424
Query: 300 WQCQFVSGFTSQVFPLPCPQLQNK 323
W C V+G TS+V P PC L ++
Sbjct: 425 WNCTDVAGITSEVNPKPCALLPDQ 448
>gi|186701252|gb|ACC91278.1| glycoside hydrolase family 28 protein [Capsella rubella]
Length = 494
Score = 338 bits (866), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 168/333 (50%), Positives = 231/333 (69%), Gaps = 5/333 (1%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
++ +I+PLPSYGRGR+ GGR ISL+ G +LT+V+ITG NGTIDGQG+ WW + LK
Sbjct: 140 DYEVIEPLPSYGRGRDTDGGRFISLLFGSNLTDVVITGENGTIDGQGEPWWGKFKRGELK 199
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+TR +L+E+M+S+ I ISNLTF NSP W IHPVY RN+ I+G+TILAP+ PNTDGI+PD
Sbjct: 200 YTRPYLIEIMHSDGIQISNLTFLNSPSWHIHPVYSRNIFIQGLTILAPVTVPNTDGINPD 259
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S TN IEDCYI SGDD +AVKSGWD YGIA P+ +++RR++ +P + + +GSEM
Sbjct: 260 SCTNTRIEDCYIVSGDDCIAVKSGWDQYGIAYGMPTKQLLIRRLTCISPDSAVIALGSEM 319
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI +V + + D+ +G+RIKT GRGGY++++ +R + M+ +K ++ HP
Sbjct: 320 SGGIEDVRAEDIVAIDSESGIRIKTAIGRGGYVKDVYVRGMTMKTMKYVFWMTGSYGSHP 379
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL-LGLAP-SAKW 300
DE +DPKALP I+ I++ ++V+ N T LAGI G QF IC+ NV++ L P W
Sbjct: 380 DEHYDPKALPVIQNINYQDMVAENVTMPAQLAGISGDQFTGICISNVTITLSKKPKKVLW 439
Query: 301 QCQFVSGFTSQVFPLPC---PQLQNKSSSWCSF 330
C VSG+TS V P PC P+ Q + C+F
Sbjct: 440 NCTDVSGYTSGVTPAPCQLLPEKQPGTVVPCNF 472
>gi|224064057|ref|XP_002301370.1| predicted protein [Populus trichocarpa]
gi|222843096|gb|EEE80643.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 337 bits (864), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 164/326 (50%), Positives = 226/326 (69%), Gaps = 4/326 (1%)
Query: 1 MDEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRT 60
M EWP++ PLPSYGRGR+ GR+ SLI G +LT+VIITG NGTIDGQG WW +
Sbjct: 114 MQEWPVMKPLPSYGRGRDAAAGRYSSLIFGTNLTDVIITGNNGTIDGQGAFWWQNFHKGK 173
Query: 61 LKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGID 120
LK+TR +L+E+M S+ I ISNLT NSP W +HPVY R+++++G+TI+AP+++PNTDGI+
Sbjct: 174 LKYTRPYLIEIMFSDTIQISNLTLLNSPSWNVHPVYSRDILVQGITIIAPISSPNTDGIN 233
Query: 121 PDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGS 180
PDS TN IEDCYI SGDD VAVKSGWD YGIA P+ +++RR++ +P + + +GS
Sbjct: 234 PDSCTNTKIEDCYIVSGDDCVAVKSGWDEYGIAFGMPTKQLVIRRLTCISPYSATIALGS 293
Query: 181 EMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSND 240
EMSGGI +V + + +GVRIKT GRGGY+++I ++ + M +K ++
Sbjct: 294 EMSGGIEDVRAEDITAIHTESGVRIKTAVGRGGYVKDIYVKRMTMHTMKWVFWMTGNYGS 353
Query: 241 HPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAK- 299
H D+ +DP ALP I+GI++ ++V+ N T A L GI G F+EIC+ NV+ +GLAP AK
Sbjct: 354 HADKNYDPNALPLIQGINYRDMVADNVTMAARLEGIAGDPFKEICISNVT-IGLAPKAKK 412
Query: 300 --WQCQFVSGFTSQVFPLPCPQLQNK 323
W C + G TS V P PC L ++
Sbjct: 413 VPWTCTEIEGMTSGVSPRPCDLLPDQ 438
>gi|413942575|gb|AFW75224.1| glycoside hydrolase, family 28 [Zea mays]
Length = 506
Score = 335 bits (860), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 163/330 (49%), Positives = 221/330 (66%), Gaps = 2/330 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
EWPI+DPLPSYGRGR+++GGR SLI G +LT+V+ITG NGTIDGQG MWW + LK
Sbjct: 154 EWPIVDPLPSYGRGRDKVGGRFASLIGGSNLTDVVITGSNGTIDGQGAMWWSKFHKNQLK 213
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+TRG+L+ELM+S+ I ISNLT NSP W IHPVY N+V++G+TILAP N+PNTDGI+PD
Sbjct: 214 YTRGYLIELMHSDTIYISNLTLLNSPAWNIHPVYSSNIVVQGITILAPTNSPNTDGINPD 273
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S ++V IEDCYI SGDD VA+KSGWD YGI+ PS +I++RR++ +PT + + +GSEM
Sbjct: 274 SCSHVRIEDCYIVSGDDCVAIKSGWDEYGISYGMPSQHIVIRRLTCVSPTSAVIALGSEM 333
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI +V + + + + VRIKT GRG Y+ ++ R + + +K ++ HP
Sbjct: 334 SGGIQDVRAEDITAINTESAVRIKTAVGRGAYVRDVFARRMTLTTMKRVFWMTGDYKSHP 393
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTK-APVLAGIIGTQFEEICMKNVSL-LGLAPSAKW 300
D+ +DP A+P + IS+ +VV+ K A L GI G F IC+ NV+ L + W
Sbjct: 394 DDKYDPNAVPVVANISYQDVVATGVYKEAARLQGIQGAPFRGICVANVTADLSKSRKYPW 453
Query: 301 QCQFVSGFTSQVFPLPCPQLQNKSSSWCSF 330
C + G ++ V P PC LQ C F
Sbjct: 454 NCADIEGVSANVSPAPCDPLQGAHDGACPF 483
>gi|226506670|ref|NP_001151164.1| glycoside hydrolase, family 28 precursor [Zea mays]
gi|194707808|gb|ACF87988.1| unknown [Zea mays]
gi|413942574|gb|AFW75223.1| glycoside hydrolase, family 28 [Zea mays]
Length = 486
Score = 335 bits (858), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 163/330 (49%), Positives = 221/330 (66%), Gaps = 2/330 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
EWPI+DPLPSYGRGR+++GGR SLI G +LT+V+ITG NGTIDGQG MWW + LK
Sbjct: 134 EWPIVDPLPSYGRGRDKVGGRFASLIGGSNLTDVVITGSNGTIDGQGAMWWSKFHKNQLK 193
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+TRG+L+ELM+S+ I ISNLT NSP W IHPVY N+V++G+TILAP N+PNTDGI+PD
Sbjct: 194 YTRGYLIELMHSDTIYISNLTLLNSPAWNIHPVYSSNIVVQGITILAPTNSPNTDGINPD 253
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S ++V IEDCYI SGDD VA+KSGWD YGI+ PS +I++RR++ +PT + + +GSEM
Sbjct: 254 SCSHVRIEDCYIVSGDDCVAIKSGWDEYGISYGMPSQHIVIRRLTCVSPTSAVIALGSEM 313
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI +V + + + + VRIKT GRG Y+ ++ R + + +K ++ HP
Sbjct: 314 SGGIQDVRAEDITAINTESAVRIKTAVGRGAYVRDVFARRMTLTTMKRVFWMTGDYKSHP 373
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTK-APVLAGIIGTQFEEICMKNVSL-LGLAPSAKW 300
D+ +DP A+P + IS+ +VV+ K A L GI G F IC+ NV+ L + W
Sbjct: 374 DDKYDPNAVPVVANISYQDVVATGVYKEAARLQGIQGAPFRGICVANVTADLSKSRKYPW 433
Query: 301 QCQFVSGFTSQVFPLPCPQLQNKSSSWCSF 330
C + G ++ V P PC LQ C F
Sbjct: 434 NCADIEGVSANVSPAPCDPLQGAHDGACPF 463
>gi|302814173|ref|XP_002988771.1| hypothetical protein SELMODRAFT_128450 [Selaginella moellendorffii]
gi|300143592|gb|EFJ10282.1| hypothetical protein SELMODRAFT_128450 [Selaginella moellendorffii]
Length = 445
Score = 335 bits (858), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 163/318 (51%), Positives = 222/318 (69%), Gaps = 3/318 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
+WP+IDPLPSYGRGR+ G RH SL++G L +V+ITG NGTIDGQG +WW + N++L
Sbjct: 109 DWPLIDPLPSYGRGRDLPGRRHRSLVYGKDLEDVVITGGNGTIDGQGSVWWHWFRNQSLN 168
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+TRGHLVE +NS NI++SN++ NSP WTIHPVYC NVVI+G+T++AP +PNTDG+ PD
Sbjct: 169 YTRGHLVEFINSKNIVVSNISLLNSPSWTIHPVYCSNVVIRGVTVVAPSESPNTDGVQPD 228
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S T VCIEDC I SG D V+VKSGWD YGI + PS+ +++RR++ P + + GSEM
Sbjct: 229 SCTGVCIEDCAITSGGDAVSVKSGWDEYGIRVGLPSAKVVIRRITAQAPASAAIAFGSEM 288
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRIS-RGSNDH 241
SGGI NV V+ + V+++ GV +KT GRGGY++NI++ N+ M+ V I +S S++H
Sbjct: 289 SGGIKNVVVEDVRVFNSKIGVHVKTGAGRGGYVKNISVTNVTMDSVLTAIALSGNSSSEH 348
Query: 242 PDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLL--GLAPSAK 299
PDEG+DP A P +RGI V N + A L G+ FE+IC+ N++L + +K
Sbjct: 349 PDEGYDPLAYPVVRGIYVNKVWGRNISHAGSLRGLEAAPFEDICLSNITLEVDDASQGSK 408
Query: 300 WQCQFVSGFTSQVFPLPC 317
W C V G + V P PC
Sbjct: 409 WDCSNVKGASLGVTPTPC 426
>gi|226508288|ref|NP_001151102.1| glycoside hydrolase, family 28 precursor [Zea mays]
gi|195644332|gb|ACG41634.1| glycoside hydrolase, family 28 [Zea mays]
gi|219886803|gb|ACL53776.1| unknown [Zea mays]
gi|414864493|tpg|DAA43050.1| TPA: glycoside hydrolase, family 28 [Zea mays]
Length = 463
Score = 335 bits (858), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 165/333 (49%), Positives = 226/333 (67%), Gaps = 5/333 (1%)
Query: 1 MDEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRT 60
M WP+I PLPSYGRGR+ G R+ + I G +LT+VIITG NGTI+GQGQ+WWD + +
Sbjct: 116 MKHWPLIAPLPSYGRGRDEPGPRYSNFIGGSNLTDVIITGKNGTINGQGQVWWDKFHAKE 175
Query: 61 LKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGID 120
LK TRGHL+EL+ S+NI+ISN+TF ++P+W +HP YC NV I G+TILAP+N+PNTDGID
Sbjct: 176 LKFTRGHLLELLYSDNIIISNVTFVDAPYWNLHPTYCTNVTISGVTILAPVNSPNTDGID 235
Query: 121 PDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGS 180
PDSS+ V IEDCYI SGDD VAVKSGWD YGI PS +I++RR++ +PT + + +GS
Sbjct: 236 PDSSSRVKIEDCYIVSGDDCVAVKSGWDEYGIRFNMPSQHIVIRRLTCVSPTSAMIALGS 295
Query: 181 EMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSND 240
EMSGGI +V + + + VR+K+ GRGG++ +I +R + + +K ++
Sbjct: 296 EMSGGIRDVRAEDSVAINTESAVRVKSGAGRGGFVRDIFVRGLSLHTMKWVFWMTGNYGQ 355
Query: 241 HPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAK- 299
HPD DP A+P++ GI++ +V + N T A + GI + IC+ NV+ LAP AK
Sbjct: 356 HPDNTSDPNAMPEVTGINYSDVFAENVTMAGRMEGIPKDPYTGICISNVTAR-LAPDAKE 414
Query: 300 --WQCQFVSGFTSQVFPLPCPQLQNKSSSWCSF 330
W C V G TS V P PCP+L + C+F
Sbjct: 415 LQWNCTNVKGVTSHVSPKPCPELAAEGKP-CAF 446
>gi|195644726|gb|ACG41831.1| glycoside hydrolase, family 28 [Zea mays]
Length = 439
Score = 335 bits (858), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 163/330 (49%), Positives = 221/330 (66%), Gaps = 2/330 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
EWPI+DPLPSYGRGR+++GGR SLI G +LT+V+ITG NGTIDGQG MWW + LK
Sbjct: 87 EWPIVDPLPSYGRGRDKVGGRFASLIGGSNLTDVVITGSNGTIDGQGAMWWSKFHKNQLK 146
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+TRG+L+ELM+S+ I ISNLT NSP W IHPVY N+V++G+TILAP N+PNTDGI+PD
Sbjct: 147 YTRGYLIELMHSDTIYISNLTLLNSPAWNIHPVYSSNIVVQGITILAPTNSPNTDGINPD 206
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S ++V IEDCYI SGDD VA+KSGWD YGI+ PS +I++RR++ +PT + + +GSEM
Sbjct: 207 SCSHVRIEDCYIVSGDDCVAIKSGWDEYGISYGMPSQHIVIRRLTCVSPTSAVIALGSEM 266
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI +V + + + + VRIKT GRG Y+ ++ R + + +K ++ HP
Sbjct: 267 SGGIQDVRAEDITAINTESAVRIKTAVGRGAYVRDVFARRMTLTTMKRVFWMTGDYKSHP 326
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTK-APVLAGIIGTQFEEICMKNVSL-LGLAPSAKW 300
D+ +DP A+P + IS+ +VV+ K A L GI G F IC+ NV+ L + W
Sbjct: 327 DDKYDPNAVPVVANISYQDVVATGVYKEAARLQGIQGAPFRGICVANVTADLSKSRKYPW 386
Query: 301 QCQFVSGFTSQVFPLPCPQLQNKSSSWCSF 330
C + G ++ V P PC LQ C F
Sbjct: 387 NCADIEGVSANVSPAPCDPLQGAHDGACPF 416
>gi|302809176|ref|XP_002986281.1| hypothetical protein SELMODRAFT_124011 [Selaginella moellendorffii]
gi|300145817|gb|EFJ12490.1| hypothetical protein SELMODRAFT_124011 [Selaginella moellendorffii]
Length = 445
Score = 334 bits (857), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 162/318 (50%), Positives = 222/318 (69%), Gaps = 3/318 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
+WP+IDPLPSYGRGR+ G RH SL++G + +V+ITG NGTIDGQG +WW + N++L
Sbjct: 109 DWPLIDPLPSYGRGRDLPGRRHRSLVYGKDVEDVVITGGNGTIDGQGSVWWHWFRNQSLN 168
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+TRGHLVE +NS NI++SN++ NSP WTIHPVYC NVVI+G+T++AP +PNTDG+ PD
Sbjct: 169 YTRGHLVEFINSKNIVVSNISLLNSPSWTIHPVYCSNVVIRGVTVVAPSESPNTDGVQPD 228
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S T VCIEDC I SG D V+VKSGWD YGI + PS+ +++RR++ P + + GSEM
Sbjct: 229 SCTGVCIEDCAITSGGDAVSVKSGWDEYGIQVGLPSAKVVIRRITAQAPASAAIAFGSEM 288
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRIS-RGSNDH 241
SGGI NV V+ + V+++ GV +KT GRGGY++NI++ N+ M+ V I +S S++H
Sbjct: 289 SGGIKNVVVEDVRVFNSKIGVHVKTGAGRGGYVKNISVTNVTMDSVLTAIALSGNSSSEH 348
Query: 242 PDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLL--GLAPSAK 299
PDEG+DP A P +RGI V N + A L G+ FE+IC+ N++L + +K
Sbjct: 349 PDEGYDPLAYPVVRGIYVNKVWGRNISHAGSLRGLEAAPFEDICLSNITLEVDEASQGSK 408
Query: 300 WQCQFVSGFTSQVFPLPC 317
W C V G + V P PC
Sbjct: 409 WDCSNVKGASLGVTPTPC 426
>gi|297801376|ref|XP_002868572.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297314408|gb|EFH44831.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 449
Score = 333 bits (855), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 168/322 (52%), Positives = 232/322 (72%), Gaps = 1/322 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
+W + DPLPSYGRGRER G R+IS IHGD L +V+ITG NGTIDGQG+ WW++W + TL+
Sbjct: 119 KWRLTDPLPSYGRGRERPGRRYISFIHGDGLNDVVITGRNGTIDGQGEPWWNMWRHGTLE 178
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
TR L+E NS NI++S++ +NS FWT+HPVYC NVV+ +TILAP ++ NTDGIDPD
Sbjct: 179 FTRPGLIEFKNSTNIVVSHVVLQNSAFWTLHPVYCSNVVVHHVTILAPTDSFNTDGIDPD 238
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SS+NVCIED YI +GDDLVAVKSGWD YGIA PS +I +RR++G++P +G+ IGSE
Sbjct: 239 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYNLPSRDITIRRITGSSP-FAGIAIGSET 297
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI NVTV+ + ++++ G+ IKT+ GRGG I+ ITI + +E+V+ I+IS + DHP
Sbjct: 298 SGGIQNVTVENITLYNSGIGIHIKTNIGRGGSIQGITISGVYLEKVRTGIKISGDTGDHP 357
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQC 302
D+ ++ ALP +RGI+ NV + +A ++ G+ + F +C NV+L G + W+C
Sbjct: 358 DDKFNTSALPIVRGITIKNVWGIKVERAGMVQGLKDSPFTNLCFSNVTLTGTKSTPIWKC 417
Query: 303 QFVSGFTSQVFPLPCPQLQNKS 324
V G S+V P PCP+L +
Sbjct: 418 SDVVGAASKVNPTPCPELTTTT 439
>gi|115450425|ref|NP_001048813.1| Os03g0124900 [Oryza sativa Japonica Group]
gi|108705945|gb|ABF93740.1| polygalacturonase, putative, expressed [Oryza sativa Japonica
Group]
gi|113547284|dbj|BAF10727.1| Os03g0124900 [Oryza sativa Japonica Group]
gi|125584758|gb|EAZ25422.1| hypothetical protein OsJ_09236 [Oryza sativa Japonica Group]
Length = 458
Score = 333 bits (854), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 168/334 (50%), Positives = 231/334 (69%), Gaps = 7/334 (2%)
Query: 1 MDEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRT 60
+++WP+I PLPSYGRGR+ G R+ + I G +LT+VIITG NGTI+GQGQ+WWD + +
Sbjct: 111 LEDWPLIAPLPSYGRGRDEPGPRYSNFIAGSNLTDVIITGRNGTINGQGQVWWDKFHAKE 170
Query: 61 LKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGID 120
L +TRG+L+EL+ SNNI+ISN+TF +SP W +HP YC NV I G+TILAPLN+PNTDGID
Sbjct: 171 LTYTRGYLLELLYSNNIIISNVTFVDSPSWNLHPTYCTNVTISGITILAPLNSPNTDGID 230
Query: 121 PDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGS 180
PDSS++V IED YI SGDD +AVKSGWD YGI PS +I++RR++ +PT + + +GS
Sbjct: 231 PDSSSHVKIEDSYIVSGDDCIAVKSGWDQYGIKFNMPSQHILIRRLTCISPTSAMIALGS 290
Query: 181 EMSGGIFNV-TVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSN 239
EMSGGI +V VD + + D + VRIK+ GRGGY++++ +R + + +K ++
Sbjct: 291 EMSGGIRDVRAVDNVAI-DTESAVRIKSGVGRGGYVKDVFVRGLSLHTMKWVFWMTGNYG 349
Query: 240 DHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAK 299
HPD DP ALP++ GI++ +V + N T A + GI + ICM NV+ LAP AK
Sbjct: 350 QHPDNSSDPNALPEVTGINYSDVFAENVTMAGRMEGIPNDPYTGICMSNVTAQ-LAPDAK 408
Query: 300 ---WQCQFVSGFTSQVFPLPCPQLQNKSSSWCSF 330
W C V G S V P+PCP+L + C+F
Sbjct: 409 KLQWNCTDVKGVASDVSPVPCPEL-GAAGKPCAF 441
>gi|356565756|ref|XP_003551103.1| PREDICTED: probable polygalacturonase-like isoform 2 [Glycine max]
Length = 491
Score = 333 bits (854), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 174/325 (53%), Positives = 224/325 (68%), Gaps = 14/325 (4%)
Query: 4 WPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKH 63
WP++ PLPSYG GRE G R+ SLIHG HL +V+ITG+NGTI+GQGQ WW + + L H
Sbjct: 148 WPLMPPLPSYGYGREHPGPRYGSLIHGQHLKDVVITGHNGTINGQGQSWWKKYRQKRLNH 207
Query: 64 TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAP-LNAPNTDGIDPD 122
TRG LV++M S++I+I+N+T R+SPFWTIHP C+N+ IKG+TILAP APNTDGIDPD
Sbjct: 208 TRGPLVQIMFSSDIVITNITLRDSPFWTIHPYDCKNITIKGVTILAPVFGAPNTDGIDPD 267
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S ++ IEDCYI GDD +AVKSGWD YGI RPS NI++R + +TP +G+ IGSEM
Sbjct: 268 SCEDMLIEDCYISVGDDAIAVKSGWDQYGIDYGRPSMNIMIRNLVKSTP-FAGISIGSEM 326
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGG+ NVTV+ L +WD+ GVRIKT GRG Y+ IT RNI E V++ I + N+HP
Sbjct: 327 SGGVSNVTVENLLIWDSRRGVRIKTAPGRGAYVRQITYRNITFENVRVGIVMKTDYNEHP 386
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL----LGLAPSA 298
D+G+DP ALP +R ISF V + PV I G+ EEI ++NV+ +GL
Sbjct: 387 DDGYDPLALPILRDISFTTVHG-QGVRVPVR--IHGS--EEIPVRNVTFKDMSVGLTYKK 441
Query: 299 K--WQCQFVSG-FTSQVFPLPCPQL 320
K +QC FV G ++P PC L
Sbjct: 442 KHIFQCAFVQGRVIGTIYPAPCENL 466
>gi|357479389|ref|XP_003609980.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355511035|gb|AES92177.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 563
Score = 333 bits (854), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 174/325 (53%), Positives = 227/325 (69%), Gaps = 13/325 (4%)
Query: 4 WPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKH 63
WP++ PLPSYG GRER G R+ SLIHG +L +V+ITG+NGTI+GQGQ WW + + L +
Sbjct: 219 WPLMPPLPSYGYGRERPGPRYGSLIHGQNLKDVVITGHNGTINGQGQAWWKKFRQKRLNY 278
Query: 64 TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAP-LNAPNTDGIDPD 122
TRG L+++M S++I+I+++T R+SPFWT+HP C+N+ IKG+TILAP APNTDGIDPD
Sbjct: 279 TRGPLLQIMWSSDIVITDITLRDSPFWTLHPYDCKNLTIKGVTILAPVFEAPNTDGIDPD 338
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S ++ IEDCYI GDD +A+KSGWD YGIA RPS NI++R + + +G+ IGSEM
Sbjct: 339 SCEDMLIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNIMIRNLVVRSMVSAGISIGSEM 398
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI NVTV+ L VWD+ GVRIKT GRGGY+ IT RNI E V++ I + N+HP
Sbjct: 399 SGGISNVTVENLLVWDSRRGVRIKTAPGRGGYVRQITYRNITFENVRVGIVMKTDYNEHP 458
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL----LGLAPSA 298
D+G+DP ALP IR ISF NV + + PV I G+ EEI ++NV+ +GL
Sbjct: 459 DDGYDPTALPVIRDISFTNVYG-HGVRVPVR--IHGS--EEIPVRNVTFRDMSVGLTYKK 513
Query: 299 K--WQCQFVSG-FTSQVFPLPCPQL 320
K +QC FV G +FP PC L
Sbjct: 514 KHIFQCAFVHGRVIGTIFPSPCENL 538
>gi|297816104|ref|XP_002875935.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321773|gb|EFH52194.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 469
Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 164/327 (50%), Positives = 222/327 (67%), Gaps = 5/327 (1%)
Query: 3 EWPIIDPLPSYGRGRERLG-GRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTL 61
EWP+I PLPSYG+GR+ G GR SLI G +LT+V+ITG NGTI+GQGQ WWD + +
Sbjct: 118 EWPVIAPLPSYGKGRDGTGTGRFNSLISGTNLTDVVITGNNGTINGQGQYWWDKFKKKQF 177
Query: 62 KHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDP 121
K TR +L+EL+ S NI ISN+T +SP W IHPVYC NV++K +T+LAP+ PNTDGI+P
Sbjct: 178 KLTRPYLIELLFSKNIQISNITLIDSPSWNIHPVYCNNVIVKSVTVLAPVTVPNTDGINP 237
Query: 122 DSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSE 181
DS TN IEDCYI SGDD +AVKSGWD YGI P+ + +RR++ +P +GV +GSE
Sbjct: 238 DSCTNTLIEDCYIVSGDDCIAVKSGWDQYGIKFGMPTQQLSIRRLTCISPKSAGVALGSE 297
Query: 182 MSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDH 241
MSGGI +V ++ + + + + +RIKT GRG Y+++I R I M+ +K +S N H
Sbjct: 298 MSGGIKDVRIEDVTLTNTESAIRIKTAAGRGAYVKDIFARRITMKTMKYVFWMSGNYNSH 357
Query: 242 PDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAK-- 299
PDEG+DPKALP++ I++ ++ + N T + L GI F IC+ NV+ + LA AK
Sbjct: 358 PDEGFDPKALPEVTNINYRDMTAENVTMSASLDGIHKDPFTGICISNVT-IALADKAKKV 416
Query: 300 -WQCQFVSGFTSQVFPLPCPQLQNKSS 325
W C V+G TS+V P PC L K +
Sbjct: 417 QWNCTDVAGVTSRVTPEPCSLLPEKKA 443
>gi|356547950|ref|XP_003542367.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 491
Score = 332 bits (850), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 169/325 (52%), Positives = 223/325 (68%), Gaps = 13/325 (4%)
Query: 4 WPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKH 63
WP++ PLPSYG GRE G R+ SLIHG HL +V+ITG+NGTI+GQGQ WW + + L H
Sbjct: 147 WPLMPPLPSYGYGREHPGPRYGSLIHGQHLKDVVITGHNGTINGQGQTWWKKYRQKRLNH 206
Query: 64 TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAP-LNAPNTDGIDPD 122
TRG LV++M S++I+I+N+T R+SPFWT+HP C+N+ IKG+TILAP APNTDGIDPD
Sbjct: 207 TRGPLVQIMFSSDIVITNITLRDSPFWTLHPYDCKNITIKGVTILAPVFGAPNTDGIDPD 266
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S ++ IEDCYI GDD +A+KSGWD YGIA RPS NI++R + + +G+ IGSEM
Sbjct: 267 SCEDMLIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNIMIRNLVVRSMVSAGISIGSEM 326
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGG+ NV V+ + +WD+ GVRIKT +GRG Y+ IT RNI E V++ I + N+HP
Sbjct: 327 SGGVSNVMVENILIWDSRRGVRIKTARGRGAYVRQITYRNITFENVRVGIVMKTDYNEHP 386
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL----LGLAPSA 298
D+G+DP ALP +R ISF V + PV I G+ EEI ++NV+ +GL
Sbjct: 387 DDGYDPMALPILRDISFTTVHG-QGVRVPVR--IHGS--EEIPVRNVTFQDMSVGLTYKK 441
Query: 299 K--WQCQFVSG-FTSQVFPLPCPQL 320
K +QC FV G ++P PC L
Sbjct: 442 KHIFQCAFVQGRVIGTIYPAPCENL 466
>gi|356565754|ref|XP_003551102.1| PREDICTED: probable polygalacturonase-like isoform 1 [Glycine max]
Length = 492
Score = 332 bits (850), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 172/325 (52%), Positives = 222/325 (68%), Gaps = 13/325 (4%)
Query: 4 WPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKH 63
WP++ PLPSYG GRE G R+ SLIHG HL +V+ITG+NGTI+GQGQ WW + + L H
Sbjct: 148 WPLMPPLPSYGYGREHPGPRYGSLIHGQHLKDVVITGHNGTINGQGQSWWKKYRQKRLNH 207
Query: 64 TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAP-LNAPNTDGIDPD 122
TRG LV++M S++I+I+N+T R+SPFWTIHP C+N+ IKG+TILAP APNTDGIDPD
Sbjct: 208 TRGPLVQIMFSSDIVITNITLRDSPFWTIHPYDCKNITIKGVTILAPVFGAPNTDGIDPD 267
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S ++ IEDCYI GDD +AVKSGWD YGI RPS NI++R + + +G+ IGSEM
Sbjct: 268 SCEDMLIEDCYISVGDDAIAVKSGWDQYGIDYGRPSMNIMIRNLVVRSMVSAGISIGSEM 327
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGG+ NVTV+ L +WD+ GVRIKT GRG Y+ IT RNI E V++ I + N+HP
Sbjct: 328 SGGVSNVTVENLLIWDSRRGVRIKTAPGRGAYVRQITYRNITFENVRVGIVMKTDYNEHP 387
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL----LGLAPSA 298
D+G+DP ALP +R ISF V + PV I G+ EEI ++NV+ +GL
Sbjct: 388 DDGYDPLALPILRDISFTTVHG-QGVRVPVR--IHGS--EEIPVRNVTFKDMSVGLTYKK 442
Query: 299 K--WQCQFVSG-FTSQVFPLPCPQL 320
K +QC FV G ++P PC L
Sbjct: 443 KHIFQCAFVQGRVIGTIYPAPCENL 467
>gi|357509171|ref|XP_003624874.1| hypothetical protein MTR_7g088550 [Medicago truncatula]
gi|355499889|gb|AES81092.1| hypothetical protein MTR_7g088550 [Medicago truncatula]
Length = 476
Score = 331 bits (849), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 170/326 (52%), Positives = 220/326 (67%), Gaps = 5/326 (1%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
+WP + PLPSYGRGR+ G R SLI G HLT+VIITG NGTIDGQG WWD + N+ LK
Sbjct: 123 QWPQLPPLPSYGRGRDAPGPRFSSLIFGTHLTDVIITGNNGTIDGQGSYWWDKFHNKQLK 182
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
TR +++E++ S+ I ISNLT NSP W +HP Y N++IKG+TILAP+++PNTDGIDPD
Sbjct: 183 ITRPYMIEILYSDQIQISNLTLINSPSWFVHPTYSSNIIIKGLTILAPVDSPNTDGIDPD 242
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SSTNV IED YI SGDD +A+KSGWD YGI +PS II+RR++ +P + + +GSEM
Sbjct: 243 SSTNVRIEDNYIVSGDDCIAIKSGWDQYGIKFGKPSKQIIIRRLTCISPDSAMIALGSEM 302
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGS-NDH 241
SGGI NV V+ + + + VRIK+ GRGGY+++I ++ +K+ + + GS DH
Sbjct: 303 SGGIENVRVEDVTAINTESAVRIKSAVGRGGYVKDIFVKGVKLNTILRYVFWLTGSYGDH 362
Query: 242 PDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL----LGLAPS 297
PD G+DPKALPKI GI F +V++ N T A L GI F IC+ NV++ L
Sbjct: 363 PDNGFDPKALPKITGIIFRDVIAKNVTVAGQLEGISNDPFTGICISNVTIELSELKKKKK 422
Query: 298 AKWQCQFVSGFTSQVFPLPCPQLQNK 323
W C VSG TS V P PC L K
Sbjct: 423 LPWNCTDVSGVTSNVVPKPCDLLSEK 448
>gi|168053514|ref|XP_001779181.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669440|gb|EDQ56027.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 392
Score = 331 bits (849), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 161/315 (51%), Positives = 214/315 (67%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
++P+I LPSYGRGRE G R SLI+G+ L +VIITG N TIDGQG +WW + +TL
Sbjct: 78 DYPVIPGLPSYGRGRELPGPRFSSLINGNGLEDVIITGDNATIDGQGAVWWSAFRKKTLN 137
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+TRGH++EL+ S NILISNLTF+NSPFWTIHPVYC+NVV+K +TIL P +APNTDGIDPD
Sbjct: 138 YTRGHMLELIESKNILISNLTFKNSPFWTIHPVYCKNVVVKSLTILNPFDAPNTDGIDPD 197
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SS +VCIEDCYI GDD +++KSGWD +G + A PS +I V+R+ + + +G+ GSEM
Sbjct: 198 SSQHVCIEDCYISVGDDAISIKSGWDQFGTSFAMPSKHIKVQRILAFSRSSAGISFGSEM 257
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI +V VD + V A GVRIKT GRGGY+ I+++NI + ++ I + +HP
Sbjct: 258 SGGISDVKVDGMVVTGARWGVRIKTAVGRGGYVRGISVKNIVLHSIRTAIAVMGNYGEHP 317
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQC 302
DE W+ A P I I N+V N +A + G+ + F +I + N++L W C
Sbjct: 318 DENWNRTAYPLIEDIRMKNIVGENINQAGLFLGLQESPFRDIHLANIALQVNTTKQIWNC 377
Query: 303 QFVSGFTSQVFPLPC 317
V+G VFP PC
Sbjct: 378 SDVAGSYIFVFPQPC 392
>gi|302753776|ref|XP_002960312.1| hypothetical protein SELMODRAFT_74934 [Selaginella moellendorffii]
gi|300171251|gb|EFJ37851.1| hypothetical protein SELMODRAFT_74934 [Selaginella moellendorffii]
Length = 455
Score = 331 bits (849), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 159/325 (48%), Positives = 214/325 (65%), Gaps = 2/325 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
+WP++DPLPSYGRGRE G R+ SL+HG +T+V ITG NGTIDGQG +WW+ + ++TL+
Sbjct: 132 DWPVVDPLPSYGRGRELPGKRYTSLLHGLRITDVAITGNNGTIDGQGLIWWNRFRSKTLQ 191
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
HTRG LVE M S+NIL+ N+T NSPFWT+HPVY +V+IKG+TILAP APNTDG+DPD
Sbjct: 192 HTRGSLVEFMFSSNILVHNVTLINSPFWTLHPVYTSDVMIKGVTILAPHKAPNTDGVDPD 251
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SS+NVCI D YI +GDD VAVKSGWD YG+A RPS ++ + V+ T G+ +GSEM
Sbjct: 252 SSSNVCIRDTYISNGDDAVAVKSGWDEYGLAFNRPSHDVFL--VNLTVSGSHGISLGSEM 309
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI+NV + + A G+ IKT GRG YI N + + ++ + + DHP
Sbjct: 310 SGGIYNVHAYGVSISGAVQGIHIKTSAGRGAYIRNASFASFEILDTGVAFSFTGIYGDHP 369
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQC 302
D G++ A I ISF +VV + +A G+ + F C +V+L S W C
Sbjct: 370 DAGYNASAFATIENISFRDVVGMRVNRAGDFRGVPQSPFRHTCFTDVALELNGKSNHWNC 429
Query: 303 QFVSGFTSQVFPLPCPQLQNKSSSW 327
++ G++ V P PCP+LQ +S W
Sbjct: 430 SYIEGYSRHVSPPPCPELQLESECW 454
>gi|302767960|ref|XP_002967400.1| hypothetical protein SELMODRAFT_87398 [Selaginella moellendorffii]
gi|300165391|gb|EFJ31999.1| hypothetical protein SELMODRAFT_87398 [Selaginella moellendorffii]
Length = 426
Score = 331 bits (848), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 159/325 (48%), Positives = 214/325 (65%), Gaps = 2/325 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
+WP++DPLPSYGRGRE G R+ SL+HG +T+V ITG NGTIDGQG +WW+ + ++TL+
Sbjct: 103 DWPVVDPLPSYGRGRELPGKRYTSLLHGLRITDVAITGNNGTIDGQGLVWWNRFRSKTLQ 162
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
HTRG LVE M S+NIL+ N+T NSPFWT+HPVY +V+IKG+TILAP APNTDG+DPD
Sbjct: 163 HTRGSLVEFMFSSNILVHNVTLINSPFWTLHPVYTSDVMIKGVTILAPHKAPNTDGVDPD 222
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SS+NVCI D YI +GDD VAVKSGWD YG+A RPS ++ + V+ T G+ +GSEM
Sbjct: 223 SSSNVCIRDTYISNGDDAVAVKSGWDEYGLAFNRPSHDVFL--VNLTVSGSHGISLGSEM 280
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI+NV + + A G+ IKT GRG YI N + + ++ + + DHP
Sbjct: 281 SGGIYNVHAYGVSISGAVQGIHIKTSAGRGAYIRNASFASFEILDTGVAFSFTGIYGDHP 340
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQC 302
D G++ A I ISF +VV + +A G+ + F C +V+L S W C
Sbjct: 341 DAGYNASAFATIENISFRDVVGMRVNRAGDFRGVPQSPFRHTCFTDVALELNGKSNHWNC 400
Query: 303 QFVSGFTSQVFPLPCPQLQNKSSSW 327
++ G++ V P PCP+LQ +S W
Sbjct: 401 SYIEGYSRHVSPPPCPELQLESECW 425
>gi|297803786|ref|XP_002869777.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297315613|gb|EFH46036.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 494
Score = 331 bits (848), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 165/333 (49%), Positives = 228/333 (68%), Gaps = 5/333 (1%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
++ +I+PLPSYGRGR+ GGR ISL+ G +LT+V+ITG NGTIDGQG+ WW + LK
Sbjct: 140 DYEVIEPLPSYGRGRDTDGGRFISLLFGSNLTDVVITGENGTIDGQGEPWWGKFKRGELK 199
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+TR +L+E+M+S+ I ISNLTF NSP W IHPVY RN+ I+ +TILAP+ PNTDGI+PD
Sbjct: 200 YTRPYLIEIMHSDGIQISNLTFLNSPSWHIHPVYSRNIFIQSLTILAPVTVPNTDGINPD 259
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S TN IEDCYI SGDD +AVKSGWD YGI P+ +++RR++ +P + + +GSEM
Sbjct: 260 SCTNTRIEDCYIVSGDDCIAVKSGWDQYGINYGMPTKQLLIRRLTCISPDSAVIALGSEM 319
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI +V + + ++ +G+RIKT GRGGY++++ +R + M +K ++ HP
Sbjct: 320 SGGIEDVRAEDIVAINSESGIRIKTAIGRGGYVKDVYVRGMTMNTMKYVFWMTGSYGSHP 379
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL-LGLAP-SAKW 300
DE +DPKALP I+ I++ ++V+ N T LAGI G QF IC+ NV++ L P W
Sbjct: 380 DEHYDPKALPVIQNINYQDMVAENVTMPAQLAGISGDQFTGICISNVTITLSKKPKKVLW 439
Query: 301 QCQFVSGFTSQVFPLPC---PQLQNKSSSWCSF 330
C VSG+TS V P PC P+ Q + C+F
Sbjct: 440 NCTDVSGYTSGVTPQPCQLLPEKQPGTVVPCNF 472
>gi|356528677|ref|XP_003532926.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 494
Score = 330 bits (846), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 164/335 (48%), Positives = 228/335 (68%), Gaps = 7/335 (2%)
Query: 2 DEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTL 61
++WP+IDPLPSYGRGR+ GGR SLI G +LT+VIITG NGTIDGQG +WW + L
Sbjct: 140 NDWPVIDPLPSYGRGRDTQGGRFSSLIFGTNLTDVIITGDNGTIDGQGDLWWQKFHKGEL 199
Query: 62 KHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDP 121
K+TR +LVE+M S+N+ ISNLT NSP W +HP+Y NVV++G+TILAP+ +PNTDGI+P
Sbjct: 200 KYTRPYLVEIMYSDNVQISNLTLVNSPSWNVHPIYSSNVVVQGITILAPVTSPNTDGINP 259
Query: 122 DSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSE 181
DS T+ IEDCYI SGDD VAVKSGWD YGIA P+ +++RR++ +P + + +GSE
Sbjct: 260 DSCTDTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPFSAAIALGSE 319
Query: 182 MSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDH 241
MSGGI ++ + + + +GVRIKT GRGGY+++I +R + M+ +K ++ H
Sbjct: 320 MSGGIQDMRAEDIVAINTESGVRIKTAVGRGGYVKDIFVRRMTMKTMKWAFWMTGNYGSH 379
Query: 242 PDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAK-- 299
D+ +DP ALP I+ I++ ++V+ N T A L GI G F IC+ NV+ + LA AK
Sbjct: 380 ADDNYDPNALPVIQNINYRDMVAENVTMAARLEGISGDPFTGICISNVT-IQLAKKAKKV 438
Query: 300 -WQCQFVSGFTSQVFPLPCPQLQNKSSS---WCSF 330
W C ++G +S V P PC L ++ C+F
Sbjct: 439 PWTCTDIAGISSDVTPAPCDLLPDQGEEKIGACTF 473
>gi|326490848|dbj|BAJ90091.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 488
Score = 330 bits (846), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 158/330 (47%), Positives = 221/330 (66%), Gaps = 2/330 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
+WP+IDPLPSYGRGR+ GGR+ SL+ G +LT+V+ITG NGTIDGQG WW + + LK
Sbjct: 123 QWPVIDPLPSYGRGRDHAGGRYASLVSGSNLTDVVITGNNGTIDGQGATWWSKYKSGKLK 182
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+TRG+L+ELM+++ + ISN+T NSP W IHPVY RN+V+ G+TILAP+ +PNTDGI+PD
Sbjct: 183 YTRGYLIELMHTDGVFISNVTLVNSPAWNIHPVYSRNIVVSGVTILAPVKSPNTDGINPD 242
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S + V IEDCY+ SGDD VA+KSGWD YGIA+ PS +I VRR++ +PT + + +GSEM
Sbjct: 243 SCSQVRIEDCYVVSGDDCVAIKSGWDEYGIAVGMPSEHISVRRLTCVSPTSAVIALGSEM 302
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI +V + + + VRIKT GRG Y+ ++ R ++++ +K ++ HP
Sbjct: 303 SGGIRDVRAEDITAIGTESAVRIKTAVGRGAYVRDVYARRMRLDGMKRVFWMTGDYKSHP 362
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTK-APVLAGIIGTQFEEICMKNVSL-LGLAPSAKW 300
D+G+D A+P + IS+ +VV+ K A + GI G F+ ICM NV++ + W
Sbjct: 363 DDGYDKAAVPVVENISYQDVVATGVWKEAARMQGIQGAPFKGICMANVTMEMTKERKVSW 422
Query: 301 QCQFVSGFTSQVFPLPCPQLQNKSSSWCSF 330
C V G ++ V P PC LQ C F
Sbjct: 423 NCADVEGVSAGVTPAPCAPLQGTHGGACPF 452
>gi|356513351|ref|XP_003525377.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 469
Score = 330 bits (845), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 164/335 (48%), Positives = 228/335 (68%), Gaps = 7/335 (2%)
Query: 2 DEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTL 61
++WP+IDPLPSYGRGR+ GGR SLI G +LT+VIITG NGTIDGQG +WW + L
Sbjct: 115 NDWPVIDPLPSYGRGRDTQGGRFSSLIFGTNLTDVIITGDNGTIDGQGDLWWQKFRKGEL 174
Query: 62 KHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDP 121
K+TR +L+E+M S+N+ ISNLT NSP W +HP+Y N+V++G+TILAP+ +PNTDGI+P
Sbjct: 175 KYTRPYLIEIMYSDNVQISNLTLVNSPSWNVHPIYSSNLVVQGITILAPVTSPNTDGINP 234
Query: 122 DSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSE 181
DS TN IEDCYI SGDD VAVKSGWD YGIA P+ +++RR++ +P + + +GSE
Sbjct: 235 DSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPFSAVIALGSE 294
Query: 182 MSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDH 241
MSGGI +V + + ++ +GVRIKT GRGGY+++I +R + M+ +K ++ H
Sbjct: 295 MSGGIQDVRAEDIVAINSESGVRIKTAVGRGGYVKDIFVRRMTMKTMKWAFWMTGNYGSH 354
Query: 242 PDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAK-- 299
D+ +DP ALP I+ I++ ++V+ N T A L GI G F IC+ NV+ + LA AK
Sbjct: 355 ADDNYDPNALPVIQNINYRDMVAENVTMAARLEGISGDPFTGICISNVT-IQLAKKAKKV 413
Query: 300 -WQCQFVSGFTSQVFPLPC---PQLQNKSSSWCSF 330
W C ++G +S V P PC P + C+F
Sbjct: 414 PWTCTDIAGISSDVTPAPCGLLPDQGEEKIGACTF 448
>gi|356530050|ref|XP_003533597.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 484
Score = 329 bits (844), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 158/323 (48%), Positives = 219/323 (67%), Gaps = 2/323 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
EWP+++PLPSYGRGR+ GR SLI G +LT+VI+TG NGTIDGQG+ WW + + LK
Sbjct: 128 EWPVLEPLPSYGRGRDAPAGRFTSLIFGTNLTDVIVTGENGTIDGQGEFWWQQFHRKKLK 187
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+TR +L+ELM S+NI ISNLT NSP W +HPVY N++++G+TI AP+ +PNTDGI+PD
Sbjct: 188 YTRPYLIELMFSDNIQISNLTLLNSPSWNVHPVYSSNIIVQGITIFAPVTSPNTDGINPD 247
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S TNV IEDCYI SGDD VAVKSGWD YGI P+ +++RR++ +P + + +GSEM
Sbjct: 248 SCTNVRIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLMIRRLTCISPYSATIALGSEM 307
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI +V + + +GVRIKT GRGGY+++I ++ + + +K +++ N H
Sbjct: 308 SGGIQDVRAEDITAIQTESGVRIKTAVGRGGYVKDIYVKRMTLHTMKWAFKMTGDYNSHA 367
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAK--W 300
D +DP ALP+I+ I++ +VV+ N T A GI F IC+ NV+L A + K W
Sbjct: 368 DSHYDPNALPEIKNINYRDVVAENVTIAARFQGISNDPFTGICIANVTLRMAAKAKKQPW 427
Query: 301 QCQFVSGFTSQVFPLPCPQLQNK 323
C + G TS V P PC L ++
Sbjct: 428 TCTDIEGMTSGVTPPPCGLLPDQ 450
>gi|255550387|ref|XP_002516244.1| polygalacturonase, putative [Ricinus communis]
gi|223544730|gb|EEF46246.1| polygalacturonase, putative [Ricinus communis]
Length = 494
Score = 329 bits (844), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 171/325 (52%), Positives = 225/325 (69%), Gaps = 13/325 (4%)
Query: 4 WPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKH 63
WP++ PLPSYG GRE G R+ SLIHG +L +V+ITG+NGTI+GQGQ WW + + L H
Sbjct: 150 WPLMPPLPSYGYGREHPGPRYGSLIHGQNLKDVVITGHNGTINGQGQTWWKKYRQKLLNH 209
Query: 64 TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAP-LNAPNTDGIDPD 122
TRG LV++M S++ILI+N+T R+SPFWT+HP C+NV I+ +TILAP L APNTDGIDPD
Sbjct: 210 TRGPLVQIMWSSDILITNITLRDSPFWTLHPYDCKNVTIRNVTILAPVLEAPNTDGIDPD 269
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S ++ IEDCYI GDD +A+KSGWD YGIA RPS+NI++R + + +G+ IGSEM
Sbjct: 270 SCEDMVIEDCYISVGDDGIAIKSGWDQYGIAYRRPSTNILIRNLVVRSMVSAGISIGSEM 329
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGG+ N+TV+ L VW + VRIKT GRGGY+ +IT RN+ + V++ I I N+HP
Sbjct: 330 SGGVSNITVENLLVWSSRRAVRIKTAPGRGGYVRHITYRNLTFDNVRVGIVIKTDYNEHP 389
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL----LGLAPSA 298
DEG+DPKA+P +R ISF V + PV I G+ EEI ++NV+ +GL
Sbjct: 390 DEGYDPKAVPVLRDISFTGVHG-QGVRVPVR--IHGS--EEIPVRNVTFQDMSVGLTYKK 444
Query: 299 K--WQCQFVSG-FTSQVFPLPCPQL 320
K +QC FV G +FP PC L
Sbjct: 445 KHIFQCAFVQGRVIGTIFPAPCENL 469
>gi|356520375|ref|XP_003528838.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 482
Score = 329 bits (844), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 163/326 (50%), Positives = 220/326 (67%), Gaps = 4/326 (1%)
Query: 1 MDEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRT 60
+ EWP I+PLPSYGRGR+ GR+ SLI G +LT+VI+TG NGTIDGQG WW + +
Sbjct: 126 ISEWPAIEPLPSYGRGRDAPAGRYTSLIFGTNLTDVIVTGGNGTIDGQGAFWWQKFHKKK 185
Query: 61 LKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGID 120
LK+TR +L+ELM S+ I ISNLT NSP W +HPVY N++IKG+TI+AP+ +PNTDGI+
Sbjct: 186 LKYTRPYLIELMFSDQIQISNLTLLNSPSWNLHPVYSSNIIIKGLTIIAPVPSPNTDGIN 245
Query: 121 PDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGS 180
PDS TN IEDCYI SGDD VAVKSGWD YGI P+ +++RR++ +P + + +GS
Sbjct: 246 PDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRRLTCISPQSAAIALGS 305
Query: 181 EMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSND 240
EMSGGI +V + + +GVRIKT GRGGY+++I ++ + M +K ++
Sbjct: 306 EMSGGIQDVRAEDITAIHTESGVRIKTAVGRGGYVKDIYVKRMTMHTMKWVFWMTGNYGS 365
Query: 241 HPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAK- 299
H D +DPKALP+I GI++ +VV+ N T A L GI F IC+ NV+ +G+A AK
Sbjct: 366 HADSHYDPKALPEINGINYRDVVADNVTMAARLEGISNDPFTGICIANVT-IGMAAKAKK 424
Query: 300 --WQCQFVSGFTSQVFPLPCPQLQNK 323
W C + G TS V P PC L ++
Sbjct: 425 QPWTCTDIEGITSGVTPKPCNSLPDQ 450
>gi|168006626|ref|XP_001756010.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692940|gb|EDQ79295.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 423
Score = 329 bits (843), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 162/327 (49%), Positives = 218/327 (66%), Gaps = 3/327 (0%)
Query: 1 MDEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRT 60
+++PII LPSYGRGRE G R+ SLI+GD+L +V ITG NGTIDGQG +WW + N+T
Sbjct: 94 FNDYPIIPELPSYGRGRELPGARYSSLINGDNLEDVTITGENGTIDGQGGVWWKAFRNKT 153
Query: 61 LKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGID 120
L ++R H++EL+ S +ILI NLTF+NSP WTIHPVYC+NVVIK +T+L P ++PNTDGID
Sbjct: 154 LDYSRSHVLELIGSQDILIFNLTFQNSPSWTIHPVYCKNVVIKNLTVLNPNDSPNTDGID 213
Query: 121 PDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTC---SGVG 177
PDSS +VCIEDCYI GDD +++KSGWD YGI+ PS +I +RR+ + T +GV
Sbjct: 214 PDSSQHVCIEDCYISVGDDAISIKSGWDQYGISYGMPSKHIQIRRIVSASKTFGIHAGVS 273
Query: 178 IGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRG 237
GSEMSGGI NV VD + ++ A GVR KT GRGGYI+++ + N+ + VK +
Sbjct: 274 FGSEMSGGISNVKVDDMVLYGARWGVRFKTSPGRGGYIKHVAVHNLLLHSVKTAVAFMAN 333
Query: 238 SNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPS 297
HPD+ W+ A P I I N+V N T+A +L G+ + F I +K ++L +
Sbjct: 334 YGQHPDDNWNRTAYPVIENIVIKNIVGENITQAGILQGLPESPFRHIHLKTIALDVRSTK 393
Query: 298 AKWQCQFVSGFTSQVFPLPCPQLQNKS 324
W C +VSG V P PC L ++
Sbjct: 394 NVWNCSWVSGSYFFVVPQPCADLTRQN 420
>gi|356522584|ref|XP_003529926.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 498
Score = 328 bits (842), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 161/326 (49%), Positives = 220/326 (67%), Gaps = 3/326 (0%)
Query: 1 MDEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRT 60
M+EWP+I PLPSYGRGR+ GR+ S I G +LT+VI+TG NGTIDGQG WW ++N+
Sbjct: 141 MNEWPVIKPLPSYGRGRDAPAGRYTSFIFGTNLTDVIVTGDNGTIDGQGAFWWQQFYNKR 200
Query: 61 LKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGID 120
L +TR +L+ELM S+ I ISNLTF NSP W +HPVY N++IKG+TI+AP+ +PNTDGI+
Sbjct: 201 LNYTRPYLIELMFSDKIQISNLTFLNSPSWNVHPVYSSNIIIKGLTIIAPVPSPNTDGIN 260
Query: 121 PDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGS 180
PDS TN IEDCYI SGDD VAVKSGWD +GI P+ +++RR++ +P + + +GS
Sbjct: 261 PDSCTNTRIEDCYIVSGDDCVAVKSGWDEFGIKFGWPTKQLVIRRLTCISPQSAAIALGS 320
Query: 181 EMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSND 240
EMSGGI +V + + +GVRIKT GRGGY+++I +R + M +K ++
Sbjct: 321 EMSGGIQDVRAEDITAIHTESGVRIKTSIGRGGYVKDIYVRRMTMHTMKWAFWMTGNYGS 380
Query: 241 HPDEG-WDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV--SLLGLAPS 297
+ + +DPKALP+I+GI++ +VV+ N T A L GI + F IC+ NV S+ A
Sbjct: 381 YANNSHYDPKALPEIKGINYRDVVADNVTMAATLEGISNSPFTGICIANVTISMADKANE 440
Query: 298 AKWQCQFVSGFTSQVFPLPCPQLQNK 323
W C + G TS V P PC L +K
Sbjct: 441 KPWTCTDIEGITSGVTPKPCNSLLDK 466
>gi|224134791|ref|XP_002327490.1| predicted protein [Populus trichocarpa]
gi|222836044|gb|EEE74465.1| predicted protein [Populus trichocarpa]
Length = 452
Score = 328 bits (842), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 156/324 (48%), Positives = 217/324 (66%), Gaps = 2/324 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
EWP PLPSYG GR+ GR SLI G HLT+V++TG NGTIDGQG +WWD + + LK
Sbjct: 105 EWPAFPPLPSYGVGRDEHAGRFSSLIFGTHLTDVVVTGNNGTIDGQGAVWWDKFHQKKLK 164
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
TR +L+E + S+ + ISNLT NSP W +HP YC NV+I+ +TILAP+++PNTDGI+PD
Sbjct: 165 LTRPYLIEFLYSDQVQISNLTLINSPSWNVHPTYCSNVLIQWLTILAPVDSPNTDGINPD 224
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SS+NV IED ++ SGDD +AVKSGWD YGI RP+ ++++RR + +P + + +GSEM
Sbjct: 225 SSSNVRIEDSFVVSGDDCIAVKSGWDEYGIKFGRPTQHLVIRRFTCISPDSATIALGSEM 284
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI +V + + +GVRIKT GRG Y+++I +R + ++ +K ++ HP
Sbjct: 285 SGGIQDVRAEDITALSTQSGVRIKTAVGRGAYVKDIFVRRMTLKTMKYAFWMTGSYGSHP 344
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV--SLLGLAPSAKW 300
D G+DPKALP+I+GIS+ ++V+ N T + L GI F IC+ NV SL +W
Sbjct: 345 DTGYDPKALPEIKGISYKDIVAENVTYSARLEGIENDPFTGICISNVNISLTQKPKELQW 404
Query: 301 QCQFVSGFTSQVFPLPCPQLQNKS 324
C + G +S+V P PC L KS
Sbjct: 405 NCTDIQGVSSKVTPQPCAALLEKS 428
>gi|223635599|sp|A7PZL3.1|PGLR_VITVI RecName: Full=Probable polygalacturonase; Short=PG; AltName:
Full=Pectinase
Length = 491
Score = 328 bits (842), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 165/336 (49%), Positives = 228/336 (67%), Gaps = 7/336 (2%)
Query: 1 MDEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRT 60
+ +WP+I PLPSYGRGR+ GR+ SLI G +LT+VIITG NGTIDGQG +WW +
Sbjct: 134 ISQWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIITGDNGTIDGQGGLWWQRFHGGK 193
Query: 61 LKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGID 120
LK+TR +L+ELM S +I ISNLT NSP W +HPVY RN++I+G+TILAP+ +PNTDGI+
Sbjct: 194 LKYTRPYLIELMYSADIQISNLTLLNSPSWNVHPVYSRNILIQGITILAPVRSPNTDGIN 253
Query: 121 PDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGS 180
PDS TN IEDCYI SGDD VAVKSGWD YGIA P+ +++RR++ +P + + +GS
Sbjct: 254 PDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSAVIALGS 313
Query: 181 EMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSND 240
EMSGGI +V + + ++ +G+RIKT GRGGY+++I +R + M+ +K ++
Sbjct: 314 EMSGGIQDVRAEDIVAINSESGIRIKTGIGRGGYVKDIYVRGMTMKTMKWAFWMTGNYGS 373
Query: 241 HPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAK- 299
H D +DPKA P I+GI++ ++V+ N + A L GI F IC+ NV+ + LA AK
Sbjct: 374 HADNHYDPKAFPVIQGINYRDMVAENVSMAARLEGIPSDPFTGICISNVT-IHLAAKAKK 432
Query: 300 --WQCQFVSGFTSQVFPLPCPQLQNK---SSSWCSF 330
W C V G +S V P PC L ++ +S C+F
Sbjct: 433 VPWTCTDVEGISSGVTPTPCSTLPDQGPEKTSLCNF 468
>gi|359489656|ref|XP_003633958.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 479
Score = 328 bits (841), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 165/336 (49%), Positives = 228/336 (67%), Gaps = 7/336 (2%)
Query: 1 MDEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRT 60
+ +WP+I PLPSYGRGR+ GR+ SLI G +LT+VIITG NGTIDGQG +WW +
Sbjct: 122 ISQWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIITGDNGTIDGQGGLWWQRFHGGK 181
Query: 61 LKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGID 120
LK+TR +L+ELM S +I ISNLT NSP W +HPVY RN++I+G+TILAP+ +PNTDGI+
Sbjct: 182 LKYTRPYLIELMYSADIQISNLTLLNSPSWNVHPVYSRNILIQGITILAPVRSPNTDGIN 241
Query: 121 PDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGS 180
PDS TN IEDCYI SGDD VAVKSGWD YGIA P+ +++RR++ +P + + +GS
Sbjct: 242 PDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSAVIALGS 301
Query: 181 EMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSND 240
EMSGGI +V + + ++ +G+RIKT GRGGY+++I +R + M+ +K ++
Sbjct: 302 EMSGGIQDVRAEDIVAINSESGIRIKTGIGRGGYVKDIYVRGMTMKTMKWAFWMTGNYGS 361
Query: 241 HPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAK- 299
H D +DPKA P I+GI++ ++V+ N + A L GI F IC+ NV+ + LA AK
Sbjct: 362 HADNHYDPKAFPVIQGINYRDMVAENVSMAARLEGIPSDPFTGICISNVT-IHLAAKAKK 420
Query: 300 --WQCQFVSGFTSQVFPLPCPQLQNK---SSSWCSF 330
W C V G +S V P PC L ++ +S C+F
Sbjct: 421 VPWTCTDVEGISSGVTPTPCSTLPDQGPEKTSLCNF 456
>gi|356568425|ref|XP_003552411.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 484
Score = 328 bits (841), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 158/325 (48%), Positives = 220/325 (67%), Gaps = 2/325 (0%)
Query: 1 MDEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRT 60
+ EWP+++PLPSYGRGR+ GR SLI G +LT+VI+TG NGTIDGQG+ WW + +
Sbjct: 126 ITEWPVLEPLPSYGRGRDAPAGRFTSLIFGTNLTDVIVTGENGTIDGQGEFWWQQFHRKK 185
Query: 61 LKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGID 120
LK+TR +L+ELM S+NI ISNLT NSP W +HPVY N++++G+TI AP+ +PNTDGI+
Sbjct: 186 LKYTRPYLIELMFSDNIQISNLTLLNSPSWNVHPVYSSNIIVQGITIYAPVTSPNTDGIN 245
Query: 121 PDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGS 180
PDS TNV IEDCYI SGDD VAVKSGWD YGI P+ +++RR++ +P + + +GS
Sbjct: 246 PDSCTNVRIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRRLTCISPYSATIALGS 305
Query: 181 EMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSND 240
EMSGGI +V + + +GVRIKT GRGGY+++I ++ + + +K +++ N
Sbjct: 306 EMSGGIQDVRAEDITAIQTESGVRIKTAVGRGGYVKDIYVKRMTLHTMKWAFKMTGDYNS 365
Query: 241 HPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAK- 299
H D +DP ALP+I+ I++ +VV+ N T A GI F IC+ NV+L A + K
Sbjct: 366 HADGHYDPNALPEIKNINYRDVVAENVTIAARFQGISNDPFTGICIANVTLRMAAKAKKQ 425
Query: 300 -WQCQFVSGFTSQVFPLPCPQLQNK 323
W C + G TS V P PC L ++
Sbjct: 426 PWTCTDIEGMTSGVTPPPCGLLPDQ 450
>gi|15236514|ref|NP_194081.1| putative polygalacturonase [Arabidopsis thaliana]
gi|3451075|emb|CAA20471.1| putative protein [Arabidopsis thaliana]
gi|7269198|emb|CAB79305.1| putative protein [Arabidopsis thaliana]
gi|23296346|gb|AAN13048.1| unknown protein [Arabidopsis thaliana]
gi|62320484|dbj|BAD95012.1| hypothetical protein [Arabidopsis thaliana]
gi|332659368|gb|AEE84768.1| putative polygalacturonase [Arabidopsis thaliana]
Length = 495
Score = 328 bits (841), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 164/333 (49%), Positives = 228/333 (68%), Gaps = 5/333 (1%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
++ +I+PLPSYGRGR+ GGR ISL+ G +LT+V+ITG NGTIDGQG+ WW + LK
Sbjct: 141 DYEVIEPLPSYGRGRDTDGGRFISLLFGSNLTDVVITGENGTIDGQGEPWWGKFKRGELK 200
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+TR +L+E+M+S+ I ISNLTF NSP W IHPVY N+ I+G+TILAP+ PNTDGI+PD
Sbjct: 201 YTRPYLIEIMHSDGIQISNLTFLNSPSWHIHPVYSSNIYIQGLTILAPVTVPNTDGINPD 260
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S TN IEDCYI SGDD +AVKSGWD YGI P+ +++RR++ +P + + +GSEM
Sbjct: 261 SCTNTRIEDCYIVSGDDCIAVKSGWDQYGINYGMPTKQLLIRRLTCISPDSAVIALGSEM 320
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI +V + + ++ +G+RIKT GRGGY++++ +R + M +K ++ HP
Sbjct: 321 SGGIEDVRAEDIVAINSESGIRIKTAIGRGGYVKDVYVRGMTMMTMKYVFWMTGSYGSHP 380
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL-LGLAP-SAKW 300
D+ +DPKALP I+ I++ ++V+ N T LAGI G QF IC+ NV++ L P W
Sbjct: 381 DDHYDPKALPVIQNINYQDMVAENVTMPAQLAGISGDQFTGICISNVTITLSKKPKKVLW 440
Query: 301 QCQFVSGFTSQVFPLPC---PQLQNKSSSWCSF 330
C VSG+TS V P PC P+ Q + C+F
Sbjct: 441 NCTDVSGYTSGVTPQPCQLLPEKQPGTVVPCNF 473
>gi|357443849|ref|XP_003592202.1| hypothetical protein MTR_1g100060 [Medicago truncatula]
gi|355481250|gb|AES62453.1| hypothetical protein MTR_1g100060 [Medicago truncatula]
Length = 487
Score = 328 bits (840), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 165/330 (50%), Positives = 221/330 (66%), Gaps = 3/330 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
+WP + LPSYGRGRE+ GGR SLI G +L +VIITG NGTIDGQG WWD + + LK
Sbjct: 137 DWPQLPALPSYGRGREKPGGRFSSLIFGTNLIDVIITGNNGTIDGQGSTWWDKFQKKQLK 196
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
TR +++E+M S+ I ISNLT NSP W +HPVY N++I G+TILAP++ PNTDGIDPD
Sbjct: 197 ITRPYMIEIMYSDQIQISNLTLVNSPSWFVHPVYSSNIIINGLTILAPVDVPNTDGIDPD 256
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SSTNV IED YI SGDD +A+KSGWD YGI + +PS NIIVRR++ +P + V +GSEM
Sbjct: 257 SSTNVLIEDNYIVSGDDCIAIKSGWDEYGIKVGKPSQNIIVRRLTCISPKSALVALGSEM 316
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI +V ++ + + + VRIK+ GRG ++++I ++ + + +K ++ DHP
Sbjct: 317 SGGIQDVRIEDVTAINTESAVRIKSAVGRGAFVKDIFVKGMDLNTLKYVFWMTGSYGDHP 376
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAK--W 300
D G+DP ALPKI GI++ +V + N T A + GI F IC+ NV++ A K W
Sbjct: 377 DNGFDPNALPKISGINYRDVTAKNVTIAGKVEGISNDPFTGICVSNVTIEMSAHKKKLPW 436
Query: 301 QCQFVSGFTSQVFPLPCPQLQNKSSSWCSF 330
C +SG TS V P PC L+ K C F
Sbjct: 437 NCTDISGVTSNVVPKPCELLKEKEIE-CPF 465
>gi|356534103|ref|XP_003535597.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 466
Score = 328 bits (840), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 164/330 (49%), Positives = 216/330 (65%), Gaps = 2/330 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
EWP + LPSYGRGR+ GGR SLI G HLT+V+ITG NG IDGQG WW+ + L
Sbjct: 121 EWPQLPVLPSYGRGRDAPGGRFSSLIFGTHLTDVVITGNNGLIDGQGAYWWNKFHQGQLT 180
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
TR +L+E+M S+ I IS LT NSP W +HPVY N++IKG+TI AP+++PNTDGI+PD
Sbjct: 181 LTRPYLIEIMYSDQIQISFLTLVNSPTWFVHPVYSSNIIIKGLTIKAPVDSPNTDGINPD 240
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S +N+ IEDC I SGDD +AVKSGWD YGI P+ ++I+RR++ +P + + +GSEM
Sbjct: 241 SCSNIRIEDCNITSGDDCIAVKSGWDEYGIRFGMPTQHLIIRRITCVSPDSAMIALGSEM 300
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI++V + L + A VRIKT GRGGY++NI ++ + + +K I+ DHP
Sbjct: 301 SGGIYDVRAEDLTAINTEAAVRIKTAIGRGGYVKNIFVKGMNLNTMKYVFWITGTYGDHP 360
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAK--W 300
D G+DPKALP I GI++ +VV+ N TK+ L GI F IC+ NVS+ K W
Sbjct: 361 DPGYDPKALPYITGINYRDVVATNVTKSARLEGISNDPFTGICISNVSIQVSEQQKKLQW 420
Query: 301 QCQFVSGFTSQVFPLPCPQLQNKSSSWCSF 330
C +SG TS V P PC L K C F
Sbjct: 421 NCSNISGVTSNVTPYPCALLPEKGQLECPF 450
>gi|411101510|gb|AFW04075.1| polygalacturonase [Litchi chinensis]
Length = 481
Score = 327 bits (837), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 163/330 (49%), Positives = 221/330 (66%), Gaps = 2/330 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
EWP + LPSYGRGR+ GGR SLI G +LT+V++TG NGTIDGQG WW + L
Sbjct: 129 EWPRLPVLPSYGRGRDAAGGRLSSLIFGTNLTDVVVTGANGTIDGQGAYWWGKFKKNQLD 188
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
TR +L+E+M SN + ISNLTF NSP W +HP+Y NV+I+G+TILAP+++PNTDGIDPD
Sbjct: 189 VTRPYLIEIMYSNQVQISNLTFVNSPSWNVHPIYSSNVIIQGLTILAPVDSPNTDGIDPD 248
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S T++ IEDCYI SGDD +AVKSGWD YGI + P+ +++RRV+ +P + + +GSEM
Sbjct: 249 SCTDIRIEDCYIVSGDDCIAVKSGWDQYGIKVGMPTQRLVIRRVTCISPDSATIALGSEM 308
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI +V + + D +GVRIKT GRGGY+++I +R + M+ +K ++ HP
Sbjct: 309 SGGIRDVRAEDITAIDTQSGVRIKTGVGRGGYVKDIYVRRMTMKTMKYVFWMTGSYGQHP 368
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL-LGLAPSA-KW 300
D G+DPKALP I GI++ ++V+ N T + L GI F+ IC+ NV++ L P +W
Sbjct: 369 DPGFDPKALPDIHGINYRDMVAENVTYSARLDGIPNDPFKGICIFNVTITLTKKPKELQW 428
Query: 301 QCQFVSGFTSQVFPLPCPQLQNKSSSWCSF 330
C V G TS+V P C L K C F
Sbjct: 429 NCTDVQGVTSRVTPPACSLLPEKKPVDCPF 458
>gi|356560736|ref|XP_003548644.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 479
Score = 327 bits (837), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 160/323 (49%), Positives = 217/323 (67%), Gaps = 2/323 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
EWP+I+PLPSYGRGR+ GR+ SLI G +LT+VI+TG NGTIDGQG WW + + LK
Sbjct: 128 EWPVIEPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGAFWWQKFQKKKLK 187
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+TR +L+ELM S+ I ISNLT NSP W +HPVY N++IKG+TI+AP+ +PNTDGI+PD
Sbjct: 188 YTRPYLIELMFSDKIQISNLTLLNSPSWNVHPVYSSNIIIKGLTIIAPVPSPNTDGINPD 247
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S TN IEDCYI SGDD VAVKSGWD YGI P+ +++RR++ +P + + +GSEM
Sbjct: 248 SCTNTRIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRRLTCISPESAAIALGSEM 307
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI +V + + +GVRIKT GRGGY+++I ++ + M +K ++ H
Sbjct: 308 SGGIQDVRAEDITAIHTESGVRIKTAVGRGGYVKDIYVKRMTMHTMKWVFWMTGNYGSHA 367
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAK--W 300
D +DP ALP+I GI++ +VV+ N T A L GI F IC+ NV++ A + K W
Sbjct: 368 DSHYDPNALPEINGINYRDVVADNVTIAARLEGISNDPFTGICIANVTINMAAKAKKQPW 427
Query: 301 QCQFVSGFTSQVFPLPCPQLQNK 323
C + G TS V P PC L ++
Sbjct: 428 ACTDIEGITSGVTPKPCNSLPDQ 450
>gi|15229058|ref|NP_190464.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|6522571|emb|CAB62015.1| endo-polygalacturonase-like protein [Arabidopsis thaliana]
gi|67633678|gb|AAY78763.1| glycoside hydrolase family 28 protein [Arabidopsis thaliana]
gi|332644955|gb|AEE78476.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 469
Score = 327 bits (837), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 164/336 (48%), Positives = 224/336 (66%), Gaps = 9/336 (2%)
Query: 3 EWPIIDPLPSYGRGRERLG-GRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTL 61
EWP+I PLPSYG+GR+ G GR SLI G +LT+V+ITG NGTI+GQGQ WWD + +
Sbjct: 118 EWPVIAPLPSYGKGRDGTGTGRFNSLISGTNLTDVVITGNNGTINGQGQYWWDKFKKKQF 177
Query: 62 KHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDP 121
K TR +L+E++ S NI ISN+T +SP W IHPVYC +V++K +T+LAP+ PNTDGI+P
Sbjct: 178 KITRPYLIEILFSKNIQISNITLIDSPSWNIHPVYCNSVIVKSVTVLAPVTVPNTDGINP 237
Query: 122 DSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSE 181
DS TN IEDCYI SGDD +AVKSGWD YGI P+ + +RR++ +P +GV +GSE
Sbjct: 238 DSCTNTLIEDCYIVSGDDCIAVKSGWDQYGIKFGMPTQQLSIRRLTCISPKSAGVALGSE 297
Query: 182 MSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDH 241
MSGGI +V ++ + + + + +RIKT GRG Y+++I R I M+ +K +S H
Sbjct: 298 MSGGIKDVRIEDVTLTNTESAIRIKTAVGRGAYVKDIYARRITMKTMKYVFWMSGNYGSH 357
Query: 242 PDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAK-- 299
PDEG+DPKALP+I I++ ++ + N T + L GI F IC+ NV+ + LA AK
Sbjct: 358 PDEGFDPKALPEITNINYRDMTAENVTMSASLDGIDKDPFTGICISNVT-IALAAKAKKM 416
Query: 300 -WQCQFVSGFTSQVFPLPCPQLQNKSSSW----CSF 330
W C V+G TS+V P PC L K + C+F
Sbjct: 417 QWNCTDVAGVTSRVTPEPCSLLPEKKAQAKNVDCAF 452
>gi|356534105|ref|XP_003535598.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 475
Score = 326 bits (836), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 162/330 (49%), Positives = 216/330 (65%), Gaps = 2/330 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
EWP + LPSYGRGR+ GGR SLI G HLT+V+ITG+NGTIDGQG WWD + L
Sbjct: 125 EWPQLPVLPSYGRGRDAPGGRFSSLIFGTHLTDVVITGHNGTIDGQGSYWWDKFHKNQLN 184
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
TR +++E+M S+ I ISNLT NSP W +HP+Y N+ IKG+TILAP+++PNTDGIDPD
Sbjct: 185 LTRPYMIEIMYSDQIQISNLTLVNSPSWFVHPIYSSNITIKGLTILAPVDSPNTDGIDPD 244
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S TN IEDCYI SGDD VAVKSGWD YGI +P+ ++++RR++ +P + + +GSEM
Sbjct: 245 SCTNTRIEDCYIVSGDDCVAVKSGWDEYGIKFGKPTQHLVIRRLTCISPDSAMIALGSEM 304
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI +V V+ + + + VRIKT GRGGY+++I ++ + + +K ++ HP
Sbjct: 305 SGGIQDVRVEDITAINTQSAVRIKTAVGRGGYVKDIFVKGMTLSTMKYVFWMTGSYGSHP 364
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAK--W 300
D +DPKALP I GI++ +VV+ N T + L GI F IC+ NVS+ K W
Sbjct: 365 DPAFDPKALPNITGINYRDVVATNVTYSAKLEGISNDPFTGICISNVSIQVSEQKKKLQW 424
Query: 301 QCQFVSGFTSQVFPLPCPQLQNKSSSWCSF 330
C V+G TS V P C L K C F
Sbjct: 425 NCTDVAGVTSNVTPNTCQLLPEKGKFDCPF 454
>gi|356535839|ref|XP_003536450.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 476
Score = 326 bits (835), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 162/330 (49%), Positives = 216/330 (65%), Gaps = 2/330 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
EWP + LPSYGRGR+ GGR SLI G HLT+V+ITG+NGTIDGQG WWD + L
Sbjct: 126 EWPQLPVLPSYGRGRDAPGGRFSSLIFGTHLTDVVITGHNGTIDGQGSYWWDKFHKNQLN 185
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
TR +++E+M S+ I ISNLT NSP W +HP+Y N+ IKG+TILAP+++PNTDGIDPD
Sbjct: 186 LTRPYMIEIMYSDQIQISNLTLVNSPSWFVHPIYSSNITIKGLTILAPVDSPNTDGIDPD 245
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S TN IEDCYI SGDD VAVKSGWD YGI +P+ ++++RR++ +P + + +GSEM
Sbjct: 246 SCTNTRIEDCYIVSGDDCVAVKSGWDEYGIKFGKPTQHLVIRRLTCISPDSAMIALGSEM 305
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI +V V+ + + + VRIKT GRGGY+++I ++ + + +K ++ HP
Sbjct: 306 SGGIQDVRVEDITAINTQSAVRIKTAVGRGGYVKDIFVKGMTLSTMKYVFWMTGSYGSHP 365
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAK--W 300
D +DPKALP I GI++ +VV+ N T + L GI F IC+ NVS+ K W
Sbjct: 366 DPAFDPKALPNITGINYRDVVATNVTYSAKLEGISNDPFTGICISNVSIQVSEQKKKLQW 425
Query: 301 QCQFVSGFTSQVFPLPCPQLQNKSSSWCSF 330
C V+G TS V P C L K C F
Sbjct: 426 NCTDVAGVTSNVTPNTCQLLPEKGKFDCPF 455
>gi|222641659|gb|EEE69791.1| hypothetical protein OsJ_29512 [Oryza sativa Japonica Group]
Length = 426
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 172/325 (52%), Positives = 220/325 (67%), Gaps = 13/325 (4%)
Query: 4 WPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKH 63
WP++ PLPSYG GRE G R+ SLIHG L +V ITG NGTI+GQGQ WW + + L H
Sbjct: 82 WPLMSPLPSYGYGREHRGPRYGSLIHGQDLKDVTITGQNGTINGQGQSWWSKFRKKVLNH 141
Query: 64 TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPL-NAPNTDGIDPD 122
TRG LV+LM S+NI ISN+T R+SPFWT+H C++V I TILAP+ APNTDGIDPD
Sbjct: 142 TRGPLVQLMRSSNITISNITLRDSPFWTLHIYDCKDVTISDTTILAPIVGAPNTDGIDPD 201
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S NV I++CYI GDD +A+KSGWD YGIA RPS+NII+ V+ + +GV IGSEM
Sbjct: 202 SCENVVIKNCYISVGDDGIAIKSGWDQYGIAYGRPSTNIIIHNVTIRSMVSAGVSIGSEM 261
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGG+ NV V+ +H+WD+ GVRIKT GRG Y+ NIT RNI +E +++ I I N+HP
Sbjct: 262 SGGVSNVLVENVHIWDSRRGVRIKTAPGRGAYVSNITYRNITLEHIRVGIVIKTDYNEHP 321
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL----LGLAPSA 298
DEG+DPKA+P I IS+ ++ + + PV I G+ EI +KNV+ +GL
Sbjct: 322 DEGFDPKAVPIIENISYSSIHG-HGVRVPVR--IQGS--AEIPVKNVTFHDMSVGLVDRK 376
Query: 299 K--WQCQFVSG-FTSQVFPLPCPQL 320
+QC FV G VFP+PC L
Sbjct: 377 NHVFQCSFVQGQVIGYVFPVPCKNL 401
>gi|302823943|ref|XP_002993619.1| hypothetical protein SELMODRAFT_137353 [Selaginella moellendorffii]
gi|300138547|gb|EFJ05311.1| hypothetical protein SELMODRAFT_137353 [Selaginella moellendorffii]
Length = 468
Score = 325 bits (833), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 165/326 (50%), Positives = 216/326 (66%), Gaps = 12/326 (3%)
Query: 2 DEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTL 61
D WP++ PLPSYGRGRE G R+ SLIHG HL +++ITG+NGTIDG G+ WW+ + L
Sbjct: 124 DLWPLMQPLPSYGRGRELPGPRYGSLIHGQHLEDIVITGHNGTIDGNGRKWWEKAKRKQL 183
Query: 62 KHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDP 121
KHTRG L++LM S I IS++T RNSPFWT+HP C NV I+G+TI+AP +APNTDGIDP
Sbjct: 184 KHTRGRLIQLMWSRGIEISDVTLRNSPFWTVHPYDCENVTIRGVTIIAPPDAPNTDGIDP 243
Query: 122 DSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSE 181
DS NV IE CYI GDD VAVKSGWD YGI +P +NI +R + P +GV IGSE
Sbjct: 244 DSCRNVLIESCYISVGDDGVAVKSGWDQYGIDYGKPCANITIRNIQVNAPVSAGVSIGSE 303
Query: 182 MSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDH 241
MSGGI NVTV+ + +W++ GVRIKT GRGGY+ + RNI ME V++ I I DH
Sbjct: 304 MSGGITNVTVENVFIWNSKRGVRIKTTPGRGGYVTQVFYRNITMETVRVGIVIKTDYGDH 363
Query: 242 PDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL----LGLAPS 297
PDE +DP ALP + I F + ++ + A I G++ E+ ++ + + +G+
Sbjct: 364 PDEFYDPTALPVVEKIFFDGIYG---SEVRIPARIYGSK--EVPVRGLEIRDMNVGVTRK 418
Query: 298 AK--WQCQFVSG-FTSQVFPLPCPQL 320
K +QC F+ G +FP PC L
Sbjct: 419 KKHVFQCSFLQGEVFGTIFPKPCEDL 444
>gi|302783324|ref|XP_002973435.1| hypothetical protein SELMODRAFT_99190 [Selaginella moellendorffii]
gi|300159188|gb|EFJ25809.1| hypothetical protein SELMODRAFT_99190 [Selaginella moellendorffii]
Length = 468
Score = 325 bits (833), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 165/330 (50%), Positives = 218/330 (66%), Gaps = 12/330 (3%)
Query: 2 DEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTL 61
D WP++ PLPSYGRGRE G R+ SLIHG HL +++ITG+NGTIDG G+ WW+ + L
Sbjct: 124 DLWPLMQPLPSYGRGRELPGPRYGSLIHGQHLEDIVITGHNGTIDGNGRKWWEKAKLKQL 183
Query: 62 KHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDP 121
KHTRG L++ M S I IS++T RNSPFWT+HP C NV I+G+TI+AP +APNTDGIDP
Sbjct: 184 KHTRGRLIQFMWSRGIEISDVTLRNSPFWTVHPYDCENVTIRGVTIIAPPDAPNTDGIDP 243
Query: 122 DSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSE 181
DS NV IE+CYI GDD VAVKSGWD YGI +P +NI +R + P +GV IGSE
Sbjct: 244 DSCRNVLIENCYISVGDDGVAVKSGWDQYGIDYGKPCANITIRNIQVNAPVSAGVSIGSE 303
Query: 182 MSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDH 241
MSGGI NVTV+ +++W++ GVRIKT GRGGY+ + RNI ME V++ I I DH
Sbjct: 304 MSGGITNVTVENVYIWNSKRGVRIKTTPGRGGYVTQVFYRNITMETVRVGIVIKTDYGDH 363
Query: 242 PDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL----LGLAPS 297
PDE +DP ALP + I F + ++ + A I G++ E+ ++ + + +G+
Sbjct: 364 PDEFYDPTALPVVEKIFFDGIYG---SEVRIPARIYGSK--EVPVRGLEIRDMNVGVTRK 418
Query: 298 AK--WQCQFVSG-FTSQVFPLPCPQLQNKS 324
K +QC F+ G +FP PC L S
Sbjct: 419 KKHVFQCSFLQGQVFGTIFPKPCEDLGTSS 448
>gi|224142779|ref|XP_002324728.1| predicted protein [Populus trichocarpa]
gi|222866162|gb|EEF03293.1| predicted protein [Populus trichocarpa]
Length = 495
Score = 325 bits (832), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 167/325 (51%), Positives = 222/325 (68%), Gaps = 13/325 (4%)
Query: 4 WPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKH 63
WP++ PLPSYG GRE G R+ SLIHG +L +++ITG+NGTIDGQGQ WW + + L H
Sbjct: 151 WPLMPPLPSYGYGREHPGPRYGSLIHGQNLRDIVITGHNGTIDGQGQTWWKKYRQKLLNH 210
Query: 64 TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPL-NAPNTDGIDPD 122
TRG LV++M S++I+ N+T RNSPFWT+HP C+NV I+ +TILAP+ APNTDGIDPD
Sbjct: 211 TRGPLVQIMWSSDIVFMNITLRNSPFWTLHPYDCKNVTIRNVTILAPIFEAPNTDGIDPD 270
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S ++ IEDCYI GDD +A+KSGWD YGIA RPS+NI++R + + +G+ IGSEM
Sbjct: 271 SCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSTNILIRNLVVRSMVSAGISIGSEM 330
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGG+ +VTV+ L VW + VRIKT GRG Y+ NIT RN+ + V++ I I N+HP
Sbjct: 331 SGGVSSVTVENLLVWSSRRAVRIKTAPGRGAYVRNITYRNLTFDDVRVGIVIKTDYNEHP 390
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL----LGLAPSA 298
DEG+DPKA+P ++ ISF + + PV I G+ EEI ++NV+ +GL
Sbjct: 391 DEGYDPKAVPTLQDISFSGIHG-QGVRVPVR--IHGS--EEIPVRNVTFQDMSVGLTYKK 445
Query: 299 K--WQCQFVSG-FTSQVFPLPCPQL 320
K +QC FV G +FP PC L
Sbjct: 446 KHIFQCAFVQGRVIGTIFPAPCENL 470
>gi|357450133|ref|XP_003595343.1| Polygalacturonase [Medicago truncatula]
gi|355484391|gb|AES65594.1| Polygalacturonase [Medicago truncatula]
gi|388518965|gb|AFK47544.1| unknown [Medicago truncatula]
Length = 474
Score = 325 bits (832), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 166/322 (51%), Positives = 223/322 (69%), Gaps = 13/322 (4%)
Query: 4 WPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKH 63
WP++ LPSYG GRE G R+ SLIHG +L +V+ITG+NGTI+GQGQ WW ++ L +
Sbjct: 130 WPLMPALPSYGYGREHPGPRYSSLIHGQNLKDVVITGHNGTINGQGQTWWTKHLHKLLNY 189
Query: 64 TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPL-NAPNTDGIDPD 122
TRG LV++M S++I+ISN+T R+SPFWT+HP C+NV IK +TILAP+ +APNTDGIDPD
Sbjct: 190 TRGPLVQIMYSSDIVISNITLRDSPFWTLHPYDCKNVTIKNVTILAPVYHAPNTDGIDPD 249
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S ++ IEDCYI GDD +A+KSGWD YGIA A+PS NII+R + + +G+ IGSEM
Sbjct: 250 SCEDMLIEDCYISVGDDAIAIKSGWDQYGIAYAKPSKNIIIRNLVVRSNVSAGISIGSEM 309
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGG+ NVT++ + VW++ +RIKT GRGGY+ IT RNI V++ I I N+HP
Sbjct: 310 SGGVSNVTIENILVWESRRAIRIKTAPGRGGYVRQITYRNITFHNVRVGIVIKTDYNEHP 369
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL----LGLAPSA 298
D+G+DP ALP +R ISF N+ + PV I G+ EEI ++NV+ +G+
Sbjct: 370 DDGYDPTALPILRDISFTNIRG-EGVRVPVR--ITGS--EEIPVRNVTFHDMNVGITYKK 424
Query: 299 K--WQCQFVSG-FTSQVFPLPC 317
K +QC FV G +FP PC
Sbjct: 425 KHIFQCAFVEGRVIGTIFPKPC 446
>gi|115479361|ref|NP_001063274.1| Os09g0439400 [Oryza sativa Japonica Group]
gi|51091349|dbj|BAD36084.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|51091399|dbj|BAD36142.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|113631507|dbj|BAF25188.1| Os09g0439400 [Oryza sativa Japonica Group]
gi|215768243|dbj|BAH00472.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 526
Score = 325 bits (832), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 172/325 (52%), Positives = 220/325 (67%), Gaps = 13/325 (4%)
Query: 4 WPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKH 63
WP++ PLPSYG GRE G R+ SLIHG L +V ITG NGTI+GQGQ WW + + L H
Sbjct: 182 WPLMSPLPSYGYGREHRGPRYGSLIHGQDLKDVTITGQNGTINGQGQSWWSKFRKKVLNH 241
Query: 64 TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPL-NAPNTDGIDPD 122
TRG LV+LM S+NI ISN+T R+SPFWT+H C++V I TILAP+ APNTDGIDPD
Sbjct: 242 TRGPLVQLMRSSNITISNITLRDSPFWTLHIYDCKDVTISDTTILAPIVGAPNTDGIDPD 301
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S NV I++CYI GDD +A+KSGWD YGIA RPS+NII+ V+ + +GV IGSEM
Sbjct: 302 SCENVVIKNCYISVGDDGIAIKSGWDQYGIAYGRPSTNIIIHNVTIRSMVSAGVSIGSEM 361
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGG+ NV V+ +H+WD+ GVRIKT GRG Y+ NIT RNI +E +++ I I N+HP
Sbjct: 362 SGGVSNVLVENVHIWDSRRGVRIKTAPGRGAYVSNITYRNITLEHIRVGIVIKTDYNEHP 421
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL----LGLAPSA 298
DEG+DPKA+P I IS+ ++ + + PV I G+ EI +KNV+ +GL
Sbjct: 422 DEGFDPKAVPIIENISYSSIHG-HGVRVPVR--IQGS--AEIPVKNVTFHDMSVGLVDRK 476
Query: 299 K--WQCQFVSG-FTSQVFPLPCPQL 320
+QC FV G VFP+PC L
Sbjct: 477 NHVFQCSFVQGQVIGYVFPVPCKNL 501
>gi|225444665|ref|XP_002277239.1| PREDICTED: probable polygalacturonase [Vitis vinifera]
gi|297738532|emb|CBI27777.3| unnamed protein product [Vitis vinifera]
Length = 493
Score = 324 bits (830), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 169/325 (52%), Positives = 223/325 (68%), Gaps = 13/325 (4%)
Query: 4 WPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKH 63
WP++ PLPSYG GRE G R+ SLIHG +L +V+ITG+NGTI+GQGQ WW + + L H
Sbjct: 149 WPLMPPLPSYGYGREHRGARYGSLIHGQNLKDVVITGHNGTINGQGQTWWKKYRQKLLNH 208
Query: 64 TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPL-NAPNTDGIDPD 122
TRG LV++M S++I+ISN+T R+SPFWT+HP C+NV IK +TILAP+ APNTDGIDPD
Sbjct: 209 TRGPLVQIMWSSDIVISNITLRDSPFWTLHPYDCKNVTIKNVTILAPIFEAPNTDGIDPD 268
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S ++ IEDCYI GDD +A+KSGWD YG+A RPS NI++R + + +GV IGSEM
Sbjct: 269 SCEDMVIEDCYISVGDDGIAIKSGWDQYGVAYGRPSVNILIRNLVIRSMVSAGVSIGSEM 328
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGG+ NVTV+ L VW++ VRIKT GRGGY+++I RN+ + V++ I I N+HP
Sbjct: 329 SGGVSNVTVENLLVWNSRRAVRIKTSPGRGGYVQHINYRNLTFDNVRVGIVIKTDYNEHP 388
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL----LGLAPSA 298
D+G+DPKALP + ISF V + PV I G+ EEI +K V+ +G+
Sbjct: 389 DDGFDPKALPILEDISFTGVHG-QGVRVPVR--IHGS--EEIPVKKVTFRDMSVGITYKK 443
Query: 299 K--WQCQFVSG-FTSQVFPLPCPQL 320
K +QC +V G VFP PC L
Sbjct: 444 KHIFQCAYVEGRVIGTVFPAPCENL 468
>gi|357114278|ref|XP_003558927.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 462
Score = 324 bits (830), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 159/323 (49%), Positives = 224/323 (69%), Gaps = 4/323 (1%)
Query: 1 MDEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRT 60
+++WP+I PLPSYGRGR+ G R+ + I G +LT+VIITG NGTI+GQGQ+WWD + +
Sbjct: 115 LNDWPLIAPLPSYGRGRDEPGPRYSNFIGGSNLTDVIITGQNGTINGQGQVWWDKYHAKE 174
Query: 61 LKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGID 120
L +TRG+L+EL+ S++I+ISN+TF ++P W +HP YC NV I G+TILAP+++PNTDGID
Sbjct: 175 LTYTRGYLLELLYSHDIIISNVTFVDAPSWNLHPTYCTNVTISGVTILAPVHSPNTDGID 234
Query: 121 PDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGS 180
PDSS+ V IEDCYI SGDD +AVKSGWD YGI PS +I+VRR++ +PT + + +GS
Sbjct: 235 PDSSSYVKIEDCYIVSGDDCIAVKSGWDEYGIKFNMPSQHIVVRRLTCISPTSAMIALGS 294
Query: 181 EMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSND 240
EMSGGI +V + + + VRIK+ GRGG+++++ +R + + +K ++
Sbjct: 295 EMSGGIQDVRAEDNIAINTESAVRIKSGVGRGGFVKDVFVRGLSLHTMKWVFWMTGNYGQ 354
Query: 241 HPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAK- 299
HPD +PKALP++ GI++ +V + N T A + GI + ICM NV+ LAP AK
Sbjct: 355 HPDNSSNPKALPEVTGINYRDVFAENVTMAGRMEGIPNDPYTGICMSNVTAQ-LAPDAKK 413
Query: 300 --WQCQFVSGFTSQVFPLPCPQL 320
W C V G S V P PCP+L
Sbjct: 414 LQWNCTDVKGVASGVSPKPCPEL 436
>gi|218202213|gb|EEC84640.1| hypothetical protein OsI_31518 [Oryza sativa Indica Group]
Length = 526
Score = 323 bits (829), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 172/325 (52%), Positives = 220/325 (67%), Gaps = 13/325 (4%)
Query: 4 WPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKH 63
WP++ PLPSYG GRE G R+ SLIHG L +V ITG NGTI+GQGQ WW + + L H
Sbjct: 182 WPLMSPLPSYGYGREHRGPRYGSLIHGQDLKDVTITGQNGTINGQGQSWWSKFRKKVLNH 241
Query: 64 TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPL-NAPNTDGIDPD 122
TRG LV+LM S+NI ISN+T R+SPFWT+H C++V I TILAP+ APNTDGIDPD
Sbjct: 242 TRGPLVQLMRSSNITISNITLRDSPFWTLHIYDCKDVTISDTTILAPIVGAPNTDGIDPD 301
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S NV I++CYI GDD +A+KSGWD YGIA RPS+NII+ V+ + +GV IGSEM
Sbjct: 302 SCENVVIKNCYISVGDDGIAIKSGWDQYGIAYGRPSTNIIIHNVTIRSMVSAGVSIGSEM 361
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGG+ NV V+ +H+WD+ GVRIKT GRG Y+ NIT RNI +E +++ I I N+HP
Sbjct: 362 SGGVSNVLVENVHIWDSRRGVRIKTAPGRGAYVSNITYRNITLEHIRVGIVIKTDYNEHP 421
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL----LGLAPSA 298
DEG+DPKA+P I IS+ ++ + + PV I G+ EI +KNV+ +GL
Sbjct: 422 DEGFDPKAVPIIENISYSSIHG-HGVRVPVR--IQGS--AEIPVKNVTFHDMSVGLVDRR 476
Query: 299 K--WQCQFVSG-FTSQVFPLPCPQL 320
+QC FV G VFP+PC L
Sbjct: 477 NHVFQCSFVQGQVIGYVFPVPCRNL 501
>gi|358248902|ref|NP_001240215.1| uncharacterized protein LOC100785005 precursor [Glycine max]
gi|255635243|gb|ACU17976.1| unknown [Glycine max]
Length = 477
Score = 323 bits (828), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 157/321 (48%), Positives = 214/321 (66%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
EWP + LPSYGRGR+ GR SLI G +LT+VIITGYNGTIDGQG WWD + LK
Sbjct: 126 EWPTLPVLPSYGRGRDAPDGRFSSLIFGTNLTDVIITGYNGTIDGQGCYWWDKFHKGELK 185
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
TR +++E+M S++I ISNLT NSP W +HP+Y +++I+G+TILAP+++PNTDGIDPD
Sbjct: 186 LTRPYMIEIMFSDHIQISNLTLINSPSWFVHPIYTSDIIIQGLTILAPVDSPNTDGIDPD 245
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S +N+ IEDCYI SGDD VA+KSGWD YGI PS +II+RR+ +P + + +GSEM
Sbjct: 246 SCSNIRIEDCYIVSGDDCVAIKSGWDEYGIKFGMPSQHIIIRRLECVSPDSAMIALGSEM 305
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI +V + L + + VRIKT GRG Y+ +I I+ + + +K ++ + HP
Sbjct: 306 SGGIQDVRAEDLTAINTQSAVRIKTAVGRGAYVRDIFIKGMNLNTMKYVFWMTGSYSSHP 365
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQC 302
D G+DPK LP I GI++ +V++ N T + L GI F IC+ NV++ +W C
Sbjct: 366 DNGFDPKTLPNITGINYRDVIAENVTYSARLEGIANDPFTGICISNVTIHSGKKKLQWNC 425
Query: 303 QFVSGFTSQVFPLPCPQLQNK 323
+ G TS V+P PC L K
Sbjct: 426 TDIEGVTSNVYPKPCELLPLK 446
>gi|242044796|ref|XP_002460269.1| hypothetical protein SORBIDRAFT_02g025730 [Sorghum bicolor]
gi|241923646|gb|EER96790.1| hypothetical protein SORBIDRAFT_02g025730 [Sorghum bicolor]
Length = 518
Score = 323 bits (828), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 170/325 (52%), Positives = 220/325 (67%), Gaps = 13/325 (4%)
Query: 4 WPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKH 63
WP++ PLPSYG GRE G R+ SLIHG L +V ITG+NGTI+GQGQ WW + + L H
Sbjct: 174 WPLMSPLPSYGYGREHKGPRYGSLIHGQDLKDVTITGHNGTINGQGQSWWVKFRRKLLNH 233
Query: 64 TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPL-NAPNTDGIDPD 122
TRG LV+LM S++I+ISN+T R+SPFWT+H C+NV I TILAP+ APNTDGIDPD
Sbjct: 234 TRGPLVQLMRSSDIIISNITLRDSPFWTLHTYDCKNVTISETTILAPIAGAPNTDGIDPD 293
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S NV I++CYI GDD +A+KSGWD YGIA RPS+NI+++ V + +GV IGSEM
Sbjct: 294 SCENVVIKNCYISVGDDGIAIKSGWDQYGIAYGRPSANIVIQNVVIRSMVSAGVSIGSEM 353
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGG+ +V V+ +HVWD+ GVRIKT GRG Y+ NI RNI +E V++ I I N+HP
Sbjct: 354 SGGVSDVLVENVHVWDSRRGVRIKTAPGRGAYVTNIVYRNITLENVRVGIVIKTDYNEHP 413
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL----LGLAPSA 298
DEG+DPKA+P I IS+ S++ + V I G+ EI +KNV+ +G+
Sbjct: 414 DEGFDPKAVPTIGNISY---TSIHGHRVRVPVRIQGS--AEIPVKNVTFHDMSIGIVDKK 468
Query: 299 K--WQCQFVSG-FTSQVFPLPCPQL 320
+QC FV G VFP+PC L
Sbjct: 469 HHVFQCSFVQGQVIGYVFPVPCKNL 493
>gi|326501406|dbj|BAK02492.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 378
Score = 323 bits (827), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 161/333 (48%), Positives = 227/333 (68%), Gaps = 5/333 (1%)
Query: 1 MDEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRT 60
+++WP+I PLPSYGRGR+ G R+ + I G +LT+VII+G NGTI+GQGQ+WWD + +
Sbjct: 31 LEDWPLIAPLPSYGRGRDEPGPRYSNFIGGSNLTDVIISGNNGTINGQGQVWWDKFHAKE 90
Query: 61 LKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGID 120
L +TRG+L+EL+ S +I+ISN+TF ++P W +HP YC NV I G+TILAP+++PNTDGID
Sbjct: 91 LDYTRGYLLELLYSRDIIISNVTFVDAPSWNLHPTYCTNVTISGVTILAPVHSPNTDGID 150
Query: 121 PDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGS 180
PDSS++V IEDCYI SGDD +AVKSGWD YGI PS +I+VRR++ +PT + + +GS
Sbjct: 151 PDSSSHVKIEDCYIVSGDDCIAVKSGWDEYGIRFNMPSQHIVVRRLTCISPTSAMIALGS 210
Query: 181 EMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSND 240
EMSGGI +V V+ + + VRIK+ GRGG++ ++ +R + + +K ++
Sbjct: 211 EMSGGIQDVRVEDNIAINTESAVRIKSGVGRGGFVRDVFVRRLSLHTMKWVFWMTGNYGQ 270
Query: 241 HPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAK- 299
HPD DPKALP++ GI++ +V + N T A + GI + ICM NV+ LAP AK
Sbjct: 271 HPDNSSDPKALPEVTGINYRDVFAENVTMAGRMEGIPNDPYTGICMSNVT-AQLAPKAKK 329
Query: 300 --WQCQFVSGFTSQVFPLPCPQLQNKSSSWCSF 330
W C V G V P PCP+L + C+F
Sbjct: 330 LQWNCTDVQGVAYGVSPEPCPELGAEGKP-CTF 361
>gi|30692538|gb|AAP33475.1| polygalacturonase-like protein [Fragaria x ananassa]
Length = 474
Score = 322 bits (825), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 155/328 (47%), Positives = 221/328 (67%), Gaps = 4/328 (1%)
Query: 1 MDEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRT 60
++EWP++ LPSYGRGR+ GR+ SLI G +LT+VI+TG NGTIDGQG+ WW + +
Sbjct: 119 LNEWPVLKALPSYGRGRDAAAGRYSSLIFGTNLTDVIVTGENGTIDGQGEFWWQQFHKKK 178
Query: 61 LKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGID 120
LK+TR +L+E+M S++I ISNLT NSP W +HPVY N++++G+TI+AP+++PNTDGI+
Sbjct: 179 LKYTRPYLIEIMFSSDIQISNLTLLNSPSWNVHPVYSSNIIVQGITIIAPISSPNTDGIN 238
Query: 121 PDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGS 180
PDS TN IEDCYI SGDD VAVKSGWD YGI+ P+ +++RR++ +P + + +GS
Sbjct: 239 PDSCTNTKIEDCYIVSGDDCVAVKSGWDEYGISFGMPTKQLVIRRLTCISPYSATIALGS 298
Query: 181 EMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSND 240
EMSGGI +V + + + + VRIKT GRG Y+++I +R + + +K ++
Sbjct: 299 EMSGGIQDVRAEDIVAINTESAVRIKTAVGRGAYVKDIYVRRMTLHTMKWAFWMTGNYGS 358
Query: 241 HPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAK- 299
H D +D A P+I GI++ +VV+ N T A L GI F ICM NV+ +GLA AK
Sbjct: 359 HADGNYDKNAFPEITGINYRDVVAENVTMAARLEGIADHPFTGICMSNVT-IGLAKKAKK 417
Query: 300 --WQCQFVSGFTSQVFPLPCPQLQNKSS 325
W C + G TS V P PC L ++ +
Sbjct: 418 QPWTCTDIQGITSGVTPTPCGLLPDQGT 445
>gi|449452594|ref|XP_004144044.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 493
Score = 322 bits (825), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 160/321 (49%), Positives = 220/321 (68%), Gaps = 5/321 (1%)
Query: 4 WPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKH 63
WP++ PLPSYG GRE +G R+ SLIHG +L +V+ITG+NGTI GQG+ WW + + L H
Sbjct: 149 WPLMPPLPSYGYGREHIGPRYGSLIHGQNLRDVVITGHNGTISGQGKTWWKKYRQKLLNH 208
Query: 64 TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPL-NAPNTDGIDPD 122
TRG LV++M S +ILISN+T R+SPFWT+HP C+N+ I+ +TILAP+ +APNTDGIDPD
Sbjct: 209 TRGPLVQIMWSRDILISNITLRDSPFWTLHPYDCKNITIRNVTILAPVHDAPNTDGIDPD 268
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S ++ IEDCYI GDD +A+KSGWD YGIA +PS NI +R V + +G+ IGSEM
Sbjct: 269 SCEDMLIEDCYISVGDDGIAIKSGWDQYGIAYGQPSKNIRIRNVVLQSMVSAGISIGSEM 328
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGG+ +TV+ + VW++ GVRIKT GRGGY+++IT RN+ ++ V++ I I N+HP
Sbjct: 329 SGGVSGITVENVVVWNSRRGVRIKTAPGRGGYVQDITYRNLTLDTVRVGIVIKTDYNEHP 388
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAK--W 300
DEG+DPKALP ++ ISF ++ + G + K++S +G+ K +
Sbjct: 389 DEGYDPKALPVLKDISFTSIHGQGVRVPVRMHGSKDIPVRNVTFKDMS-VGITYKKKHIF 447
Query: 301 QCQFVSG-FTSQVFPLPCPQL 320
QC FV G +FP PC L
Sbjct: 448 QCAFVHGRVIGTIFPAPCDNL 468
>gi|449497436|ref|XP_004160401.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like
[Cucumis sativus]
Length = 480
Score = 322 bits (825), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 159/332 (47%), Positives = 222/332 (66%), Gaps = 5/332 (1%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
EWP + LPSYG GR+ GGR+ SLI G +LT+V+ITG NGTIDGQG WWD + L
Sbjct: 127 EWPQVALLPSYGVGRDAPGGRYSSLIFGTNLTDVVITGNNGTIDGQGAYWWDKFHKGELN 186
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
TR +L+E+M S+ I IS+LT NSP W +HP+Y +NV+I+G+TILAP+++PNTDGIDPD
Sbjct: 187 LTRPYLIEIMYSDQIQISDLTLVNSPSWFVHPIYSKNVIIQGLTILAPIDSPNTDGIDPD 246
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S +N IEDC+I SGDD +AVKSGWD YGI P+ +++++R++ +P +GV +GSEM
Sbjct: 247 SCSNTRIEDCFIVSGDDCIAVKSGWDQYGIKFGMPTEDLVIKRLTCISPDSAGVALGSEM 306
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI NV ++ + + VRIKT +GRGG++++I +R + + +K ++ HP
Sbjct: 307 SGGIRNVRIENFTGINTQSAVRIKTARGRGGFVKDIFVRGMYLSTMKYVFWMTGNYKSHP 366
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAK--- 299
D+ +DP ALP+I I++ +VV+ N T + L GI G F IC+ NV +GL + K
Sbjct: 367 DDKFDPAALPEITNINYRDVVAENVTYSARLEGISGDPFTNICISNVK-IGLTATPKKLQ 425
Query: 300 WQCQFVSGFTSQVFPLPC-PQLQNKSSSWCSF 330
W C V GF+S V P PC P + S C F
Sbjct: 426 WNCTDVEGFSSDVVPPPCAPLAKAGKSGGCDF 457
>gi|15233124|ref|NP_191708.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|42572755|ref|NP_974473.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|334186188|ref|NP_001190154.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|6850840|emb|CAB71079.1| putative protein [Arabidopsis thaliana]
gi|332646690|gb|AEE80211.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|332646691|gb|AEE80212.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|332646692|gb|AEE80213.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 476
Score = 322 bits (825), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 156/327 (47%), Positives = 218/327 (66%), Gaps = 2/327 (0%)
Query: 1 MDEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRT 60
++E+PI+ LPSYGRGR+ GGR SLI G +L++VIITG NGTIDGQG WW +
Sbjct: 116 LNEYPILKALPSYGRGRDAAGGRFASLIFGTNLSDVIITGNNGTIDGQGSFWWQKFHGGK 175
Query: 61 LKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGID 120
LK+TR +L+ELM S+ I ISNLTF +SP W IHPVY N+++KG+TI+AP+ +PNTDGI+
Sbjct: 176 LKYTRPYLIELMFSDTIQISNLTFLDSPSWNIHPVYSSNIIVKGVTIIAPVKSPNTDGIN 235
Query: 121 PDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGS 180
PDS TN IEDCYI SGDD +AVKSGWD YGI+ P+ ++++RR++ +P + + +GS
Sbjct: 236 PDSCTNTRIEDCYIISGDDCIAVKSGWDEYGISFGMPTKHLVIRRLTCISPYSAAIALGS 295
Query: 181 EMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSND 240
EMSGGI +V + + + +GVRIKT GRG +++NI ++ + + +K ++
Sbjct: 296 EMSGGIEDVRAEDITAYQTESGVRIKTAVGRGAFVKNIYVKGMNLHTMKWVFWMTGNYKA 355
Query: 241 HPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKN--VSLLGLAPSA 298
H D +DP ALP+I GI++ ++V+ N + A L GI G F IC+ N +S+ A
Sbjct: 356 HADSHYDPHALPEITGINYRDIVAENVSMAGRLEGISGDPFTGICISNATISMAAKHKKA 415
Query: 299 KWQCQFVSGFTSQVFPLPCPQLQNKSS 325
W C V G TS V P PC L + S
Sbjct: 416 IWMCSDVEGVTSGVDPKPCDLLDGQES 442
>gi|449456478|ref|XP_004145976.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 480
Score = 322 bits (824), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 159/332 (47%), Positives = 222/332 (66%), Gaps = 5/332 (1%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
EWP + LPSYG GR+ GGR+ SLI G +LT+V+ITG NGTIDGQG WWD + L
Sbjct: 127 EWPQVALLPSYGVGRDAPGGRYSSLIFGTNLTDVVITGNNGTIDGQGAYWWDKFHKGELN 186
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
TR +L+E+M S+ I IS+LT NSP W +HP+Y +NV+I+G+TILAP+++PNTDGIDPD
Sbjct: 187 LTRPYLIEIMYSDQIQISDLTLVNSPSWFVHPIYSKNVIIQGLTILAPIDSPNTDGIDPD 246
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S +N IEDC+I SGDD +AVKSGWD YGI P+ +++++R++ +P +GV +GSEM
Sbjct: 247 SCSNTRIEDCFIVSGDDCIAVKSGWDQYGIKFGMPTEDLVIKRLTCISPDSAGVALGSEM 306
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI NV ++ + + VRIKT +GRGG++++I +R + + +K ++ HP
Sbjct: 307 SGGIRNVRIENFTGINTQSAVRIKTARGRGGFVKDIFVRGMYLSTMKYVFWMTGNYKSHP 366
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAK--- 299
D+ +DP ALP+I I++ +VV+ N T + L GI G F IC+ NV +GL + K
Sbjct: 367 DDKFDPAALPEITNINYRDVVAENVTYSARLEGISGDPFTNICISNVK-IGLTATPKKLQ 425
Query: 300 WQCQFVSGFTSQVFPLPC-PQLQNKSSSWCSF 330
W C V GF+S V P PC P + S C F
Sbjct: 426 WNCTDVEGFSSDVVPPPCAPLAKAGKSGGCDF 457
>gi|326532444|dbj|BAK05151.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 530
Score = 322 bits (824), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 171/325 (52%), Positives = 217/325 (66%), Gaps = 13/325 (4%)
Query: 4 WPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKH 63
WP++ PLPSYG GRE G R+ SLIHG L +VIITG+NGTI+GQGQ WW + + L H
Sbjct: 186 WPLMSPLPSYGYGREHKGPRYGSLIHGQDLKDVIITGHNGTINGQGQSWWIKFRKKLLNH 245
Query: 64 TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPL-NAPNTDGIDPD 122
TRG LV+LM S+NI+ISN+T R+SPFWT+H C+NV I G TILAP+ APNTDGIDPD
Sbjct: 246 TRGPLVQLMRSSNIIISNITLRDSPFWTLHVYDCKNVTISGTTILAPIVGAPNTDGIDPD 305
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S NV IE+CYI GDD VA+KSGWD YGIA RPS+NI +R V + +GV IGSEM
Sbjct: 306 SCENVMIENCYISVGDDGVAIKSGWDQYGIAYGRPSTNITIRNVIIRSMVSAGVSIGSEM 365
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGG+ NV V+ +H+W + GVRIKT GRG Y+ NI RNI +E V++ I I N+HP
Sbjct: 366 SGGVSNVLVENVHIWSSRRGVRIKTAPGRGAYVNNIVYRNITLENVRVGIVIKTDYNEHP 425
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLA------P 296
DE +DPKA+P IS+ S++ + V I G+ EI ++NV+ ++
Sbjct: 426 DELFDPKAVPVGGNISY---TSIHGQRVRVPVRIQGS--AEIPVRNVTFHDMSVGILDKK 480
Query: 297 SAKWQCQFVSG-FTSQVFPLPCPQL 320
+QC FV G VFP+PC L
Sbjct: 481 HHVFQCSFVQGQVIGYVFPVPCKNL 505
>gi|356501888|ref|XP_003519755.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 455
Score = 322 bits (824), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 151/328 (46%), Positives = 221/328 (67%), Gaps = 1/328 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
W +DPLPSYGRG + GR+ SLI+G +L++V+ITG NG IDGQG +WWDL +L
Sbjct: 113 HWTAMDPLPSYGRGIDVPVGRYRSLIYGQNLSDVVITGDNGIIDGQGSVWWDLISTHSLN 172
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
++R H++EL+ S+NI+ISNLTF NSP W+IHPVYC N+ I+ +T+ AP P T GI PD
Sbjct: 173 YSRPHIIELVGSDNIIISNLTFLNSPAWSIHPVYCSNIQIQKITVQAPTKFPYTSGIVPD 232
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SS +VCI++C I +G D + +KSGWD YG+A +P+SN+ +R V + + +G+ GSEM
Sbjct: 233 SSEHVCIDNCNISTGHDAIVLKSGWDEYGVAYGKPTSNVHIRGVYLQSSSGAGLAFGSEM 292
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI ++ +QLH+ ++ G+ +KT +GRGGY++NI I + K+E + + I ++ S HP
Sbjct: 293 SGGISDIIAEQLHITNSTFGIELKTTRGRGGYMKNIFISDAKLENIYLGISMTGSSGSHP 352
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL-LGLAPSAKWQ 301
D+ +DP A+P + ++F NV+ N A +GI+ + F IC+ NV+ S W
Sbjct: 353 DDKYDPNAVPDVGNVTFENVIGANIAIAGNFSGIVDSPFTPICLSNVTFSTSSESSPSWF 412
Query: 302 CQFVSGFTSQVFPLPCPQLQNKSSSWCS 329
C V G + +VFP PCP LQN S++ S
Sbjct: 413 CSNVMGISKEVFPEPCPDLQNTYSNFSS 440
>gi|449500524|ref|XP_004161121.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 493
Score = 322 bits (824), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 159/321 (49%), Positives = 220/321 (68%), Gaps = 5/321 (1%)
Query: 4 WPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKH 63
WP++ PLPSYG GRE +G R+ SLIHG +L +V+ITG+NGTI GQG+ WW + + L H
Sbjct: 149 WPLMPPLPSYGYGREHIGPRYGSLIHGQNLRDVVITGHNGTISGQGKTWWKKYRQKLLNH 208
Query: 64 TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPL-NAPNTDGIDPD 122
TRG LV++M S +ILISN+T R+SPFWT+HP C+N+ ++ +TILAP+ +APNTDGIDPD
Sbjct: 209 TRGPLVQIMWSRDILISNITLRDSPFWTLHPYDCKNITVRNVTILAPVHDAPNTDGIDPD 268
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S ++ IEDCYI GDD +A+KSGWD YGIA +PS NI +R V + +G+ IGSEM
Sbjct: 269 SCEDMLIEDCYISVGDDGIAIKSGWDQYGIAYGQPSKNIRIRNVVLQSMVSAGISIGSEM 328
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGG+ +TV+ + VW++ GVRIKT GRGGY+++IT RN+ ++ V++ I I N+HP
Sbjct: 329 SGGVSGITVENVVVWNSRRGVRIKTAPGRGGYVQDITYRNLTLDTVRVGIVIKTDYNEHP 388
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAK--W 300
DEG+DPKALP ++ ISF ++ + G + K++S +G+ K +
Sbjct: 389 DEGYDPKALPVLKDISFTSIHGQGVRVPVRMHGSKDIPVRNVTFKDMS-VGITYKKKHIF 447
Query: 301 QCQFVSG-FTSQVFPLPCPQL 320
QC FV G +FP PC L
Sbjct: 448 QCAFVHGRVIGTIFPAPCDNL 468
>gi|343172553|gb|AEL98980.1| putative polygalacturonase, partial [Silene latifolia]
gi|343172555|gb|AEL98981.1| putative polygalacturonase, partial [Silene latifolia]
Length = 431
Score = 321 bits (822), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 156/334 (46%), Positives = 222/334 (66%), Gaps = 7/334 (2%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
E+PI++PLPSYG+GR+ GR SLI G +LT+V+ITG NGTIDGQG+ WW + + L
Sbjct: 84 EYPILEPLPSYGKGRDAPAGRFASLIFGTNLTDVVITGANGTIDGQGESWWKKYKSNELT 143
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
TR +++ELM SN + ISNLT NSP W +HPVYCR+V+I+G+TILAP ++PNTDGIDPD
Sbjct: 144 QTRPYMIELMYSNGVQISNLTLLNSPNWNVHPVYCRDVIIRGLTILAPTHSPNTDGIDPD 203
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S +NV IE YI SGDD +A+KSGWD YGI P+ ++++R ++ +PT + + +GSEM
Sbjct: 204 SCSNVRIEHNYIVSGDDCIAIKSGWDEYGIRFNMPTQDVVIRHLTCISPTSATIALGSEM 263
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRIS---RGSN 239
SGGI NV + + D +G+R+KT GRG ++ NI +R + M+ +K ++ S
Sbjct: 264 SGGIQNVRAEHITAIDTESGIRVKTSPGRGAFVRNIYVRKMTMKTMKYVFWMTGYYSSSR 323
Query: 240 DHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAK 299
HPD ++P+ALP I GI+++++V+ N + L GI F+ IC+ NV+ +GLA K
Sbjct: 324 VHPDRHYNPRALPVIEGINYMDMVAANVSMPGYLEGIKEDVFKGICLSNVT-IGLAKKPK 382
Query: 300 ---WQCQFVSGFTSQVFPLPCPQLQNKSSSWCSF 330
W C + G S V P PC L+ + C F
Sbjct: 383 EMLWNCTNIEGVASGVTPQPCGFLRESKAMGCPF 416
>gi|224068502|ref|XP_002326133.1| predicted protein [Populus trichocarpa]
gi|222833326|gb|EEE71803.1| predicted protein [Populus trichocarpa]
Length = 495
Score = 321 bits (822), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 167/325 (51%), Positives = 222/325 (68%), Gaps = 13/325 (4%)
Query: 4 WPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKH 63
WP++ LPSYG GRE G R+ SLIHG +L +V+ITG+NGTIDGQGQ WW + + L H
Sbjct: 151 WPLMPALPSYGYGREHPGPRYGSLIHGQNLRDVVITGHNGTIDGQGQTWWKKYRQKLLNH 210
Query: 64 TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPL-NAPNTDGIDPD 122
TRG LV++M S++I+ +N+T R+SPFWT+HP C+NV I+ +TILAP+ APNTDGIDPD
Sbjct: 211 TRGPLVQIMWSSDIVFTNITLRDSPFWTLHPYDCKNVTIRNVTILAPIFEAPNTDGIDPD 270
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S ++ IEDCYI GDD +A+KSGWD YGIA RPS+NI++R + + +G+ IGSEM
Sbjct: 271 SCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSTNILIRNLVVRSMVSAGISIGSEM 330
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGG+ NVTV+ + VW + VRIKT GRGGY+ +IT RN+ + V++ I I N+HP
Sbjct: 331 SGGVSNVTVENVLVWSSRRAVRIKTAPGRGGYVRHITYRNLTFDNVRVGIVIKTDYNEHP 390
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL----LGLAPSA 298
DEG+DPKA+P + ISF + + PV I G+Q EI ++NV+ +GL
Sbjct: 391 DEGYDPKAVPILGDISFTGIHG-QGVRVPVR--IHGSQ--EIPVRNVTFWDMSVGLTYKK 445
Query: 299 K--WQCQFVSG-FTSQVFPLPCPQL 320
K +QC FV G VFP PC L
Sbjct: 446 KHIFQCAFVQGRVIGTVFPAPCENL 470
>gi|297817470|ref|XP_002876618.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297322456|gb|EFH52877.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 475
Score = 320 bits (821), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 155/327 (47%), Positives = 217/327 (66%), Gaps = 2/327 (0%)
Query: 1 MDEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRT 60
++E+PI+ LPSYGRGR+ GGR SL G +L++VIITG NGTIDGQG WW +
Sbjct: 116 LNEYPILKALPSYGRGRDAAGGRFASLFFGTNLSDVIITGNNGTIDGQGSFWWQKFHGGK 175
Query: 61 LKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGID 120
LK+TR +L+ELM S+ I ISNLTF +SP W IHPVY N+++KG+TI+AP+ +PNTDGI+
Sbjct: 176 LKYTRPYLIELMFSDTIQISNLTFLDSPSWNIHPVYSSNIIVKGVTIIAPVKSPNTDGIN 235
Query: 121 PDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGS 180
PDS TN IEDCYI SGDD +AVKSGWD YGI+ P+ ++++RR++ +P + + +GS
Sbjct: 236 PDSCTNTRIEDCYIISGDDCIAVKSGWDEYGISFGMPTKHLVIRRLTCISPYSAAIALGS 295
Query: 181 EMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSND 240
EMSGGI +V + + + +GVRIKT GRG +++NI ++ + + +K ++
Sbjct: 296 EMSGGIEDVRAEDITAYQTESGVRIKTAVGRGAFVKNIYVKGMNLHTMKWVFWMTGNYKA 355
Query: 241 HPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKN--VSLLGLAPSA 298
H D +DP ALP+I GI++ ++V+ N + A L GI G F IC+ N +S+ A
Sbjct: 356 HADSHYDPHALPEITGINYRDIVAENVSMAGRLEGISGDPFTGICISNATISMAAKHKKA 415
Query: 299 KWQCQFVSGFTSQVFPLPCPQLQNKSS 325
W C V G TS V P PC L + S
Sbjct: 416 IWMCSDVEGVTSGVDPKPCDLLDGQES 442
>gi|297743929|emb|CBI36899.3| unnamed protein product [Vitis vinifera]
Length = 477
Score = 320 bits (819), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 160/330 (48%), Positives = 226/330 (68%), Gaps = 3/330 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
W I+DPLPSYGRG E GGR+ SLI+G +L++V+ITG NGTIDGQG +WW+ + + +L
Sbjct: 135 HWEILDPLPSYGRGIELPGGRYRSLINGPNLSDVVITGNNGTIDGQGSVWWENFSSHSLN 194
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
++R H+VE ++SN+I+ISNLTF NSP W IHPVYC NV ++ +T AP +P T G+ PD
Sbjct: 195 YSRPHIVEFISSNDIIISNLTFLNSPAWNIHPVYCSNVWVQNITAYAPPESPRTSGVVPD 254
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SS +CIED I G D + +KSGWD YGIA +P+ N+ +RRV + + SG+ GSEM
Sbjct: 255 SSEYICIEDSNISMGYDAIVLKSGWDEYGIAYGKPTRNVHIRRVWLQSSSGSGLAFGSEM 314
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI ++ V+ +H+ D++ G+++KT KGRGGYI+ I I +++ME V + I + HP
Sbjct: 315 SGGISDILVEHIHLQDSSTGIKLKTTKGRGGYIKGILISDVEMENVGLTIGATGQCRSHP 374
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAK-WQ 301
D+ +DP ALP + GI+F ++V N + A +GI + F IC+ N+SL + S+K W
Sbjct: 375 DDKYDPGALPVVDGITFKDMVGTNVSIAGNFSGIYESPFTSICLFNISLSITSNSSKPWL 434
Query: 302 CQFVSGFTSQVFPLPCPQLQNKSSSWCSFS 331
C V G + V P PCP LQ K+S+ SFS
Sbjct: 435 CSNVFGSSECVSPEPCPNLQTKTSN--SFS 462
>gi|225437457|ref|XP_002269037.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 542
Score = 320 bits (819), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 160/330 (48%), Positives = 226/330 (68%), Gaps = 3/330 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
W I+DPLPSYGRG E GGR+ SLI+G +L++V+ITG NGTIDGQG +WW+ + + +L
Sbjct: 200 HWEILDPLPSYGRGIELPGGRYRSLINGPNLSDVVITGNNGTIDGQGSVWWENFSSHSLN 259
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
++R H+VE ++SN+I+ISNLTF NSP W IHPVYC NV ++ +T AP +P T G+ PD
Sbjct: 260 YSRPHIVEFISSNDIIISNLTFLNSPAWNIHPVYCSNVWVQNITAYAPPESPRTSGVVPD 319
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SS +CIED I G D + +KSGWD YGIA +P+ N+ +RRV + + SG+ GSEM
Sbjct: 320 SSEYICIEDSNISMGYDAIVLKSGWDEYGIAYGKPTRNVHIRRVWLQSSSGSGLAFGSEM 379
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI ++ V+ +H+ D++ G+++KT KGRGGYI+ I I +++ME V + I + HP
Sbjct: 380 SGGISDILVEHIHLQDSSTGIKLKTTKGRGGYIKGILISDVEMENVGLTIGATGQCRSHP 439
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAK-WQ 301
D+ +DP ALP + GI+F ++V N + A +GI + F IC+ N+SL + S+K W
Sbjct: 440 DDKYDPGALPVVDGITFKDMVGTNVSIAGNFSGIYESPFTSICLFNISLSITSNSSKPWL 499
Query: 302 CQFVSGFTSQVFPLPCPQLQNKSSSWCSFS 331
C V G + V P PCP LQ K+S+ SFS
Sbjct: 500 CSNVFGSSECVSPEPCPNLQTKTSN--SFS 527
>gi|357150536|ref|XP_003575492.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 451
Score = 318 bits (816), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 158/321 (49%), Positives = 213/321 (66%), Gaps = 2/321 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
EWPI++PLPSYG+G + G RH SLI+G ++T+V+ITG NG IDGQG WW+ + + L
Sbjct: 110 EWPIVEPLPSYGQGIDLPGARHRSLINGHNVTDVVITGNNGVIDGQGLTWWNWFRSNKLN 169
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
++R HLVE +S I+ISNLTF NSP W IHPVYC NV + +TI L+AP +DGI PD
Sbjct: 170 YSRPHLVEFEDSEEIVISNLTFLNSPAWAIHPVYCSNVTVNNITIQTSLDAPLSDGIVPD 229
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S +NVCIED I D +++KSGWD+YGI RP+S+I + RV + + +GSEM
Sbjct: 230 SCSNVCIEDSRISVSHDAISLKSGWDNYGITFGRPTSDIHICRVDLQASLGAALALGSEM 289
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI +V VD LH+ ++ GV +T GRGGYI ++ I +++ME V + I + + HP
Sbjct: 290 SGGISDVHVDHLHIHASSKGVSFRTAPGRGGYIRDVIISDVQMEDVHVAIEFTGDWSSHP 349
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV--SLLGLAPSAKW 300
DE +DP ALP I GI+ N+V N + A VL+GI G F +IC+ NV S+ A S W
Sbjct: 350 DEHFDPSALPVISGITLKNMVGTNISVAGVLSGIDGDPFTDICLSNVNFSIPDSAHSTSW 409
Query: 301 QCQFVSGFTSQVFPLPCPQLQ 321
C +SG++ VFP PC LQ
Sbjct: 410 SCSNISGYSELVFPEPCTDLQ 430
>gi|296083315|emb|CBI22951.3| unnamed protein product [Vitis vinifera]
Length = 482
Score = 318 bits (816), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 152/317 (47%), Positives = 213/317 (67%), Gaps = 1/317 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
W +I+PLPSYGRG E GGR+ SLI+G L +V+ITG NGTI+GQG +WWD + + +L
Sbjct: 112 HWEVIEPLPSYGRGIELPGGRYRSLINGYMLRDVVITGDNGTINGQGSVWWDWFTSHSLN 171
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
++R HLVE + S N+++SNLTF N+P + IHPVYC NV ++ +++ AP +P T GI PD
Sbjct: 172 YSRPHLVEFLASTNVVVSNLTFLNAPAYNIHPVYCSNVRVQNISVYAPPESPYTVGIVPD 231
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SS + CIEDC I G D +A+KSGWD YGIA RP++N+ +RRV+ + + S + GSEM
Sbjct: 232 SSDSTCIEDCSIAMGHDAIALKSGWDEYGIAYGRPTTNVHIRRVNLQSSSGSSLAFGSEM 291
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI NV V+Q+H++++ +G+ +T KGRGGYI+ I I ++ ME + + HP
Sbjct: 292 SGGISNVCVEQVHLYNSFSGIEFRTTKGRGGYIQEIIISDVAMENIHTAFSATGQIGSHP 351
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSA-KWQ 301
D+ +DP ALP + I+ NV+ N T A GI + F IC+ N+SL P++ W
Sbjct: 352 DDHFDPNALPVLDHITLQNVIGTNITIAGSFTGIQESPFTSICLSNISLSTTPPASISWV 411
Query: 302 CQFVSGFTSQVFPLPCP 318
C VSGF+ VFP PCP
Sbjct: 412 CSNVSGFSQWVFPEPCP 428
>gi|225431820|ref|XP_002273305.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 457
Score = 318 bits (815), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 152/317 (47%), Positives = 213/317 (67%), Gaps = 1/317 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
W +I+PLPSYGRG E GGR+ SLI+G L +V+ITG NGTI+GQG +WWD + + +L
Sbjct: 114 HWEVIEPLPSYGRGIELPGGRYRSLINGYMLRDVVITGDNGTINGQGSVWWDWFTSHSLN 173
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
++R HLVE + S N+++SNLTF N+P + IHPVYC NV ++ +++ AP +P T GI PD
Sbjct: 174 YSRPHLVEFLASTNVVVSNLTFLNAPAYNIHPVYCSNVRVQNISVYAPPESPYTVGIVPD 233
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SS + CIEDC I G D +A+KSGWD YGIA RP++N+ +RRV+ + + S + GSEM
Sbjct: 234 SSDSTCIEDCSIAMGHDAIALKSGWDEYGIAYGRPTTNVHIRRVNLQSSSGSSLAFGSEM 293
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI NV V+Q+H++++ +G+ +T KGRGGYI+ I I ++ ME + + HP
Sbjct: 294 SGGISNVCVEQVHLYNSFSGIEFRTTKGRGGYIQEIIISDVAMENIHTAFSATGQIGSHP 353
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSA-KWQ 301
D+ +DP ALP + I+ NV+ N T A GI + F IC+ N+SL P++ W
Sbjct: 354 DDHFDPNALPVLDHITLQNVIGTNITIAGSFTGIQESPFTSICLSNISLSTTPPASISWV 413
Query: 302 CQFVSGFTSQVFPLPCP 318
C VSGF+ VFP PCP
Sbjct: 414 CSNVSGFSQWVFPEPCP 430
>gi|414885630|tpg|DAA61644.1| TPA: hypothetical protein ZEAMMB73_326074 [Zea mays]
Length = 516
Score = 318 bits (815), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 168/325 (51%), Positives = 218/325 (67%), Gaps = 13/325 (4%)
Query: 4 WPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKH 63
WP++ PLPSYG GRE G R+ SLIHG L +V ITG+NGTI+GQGQ WW + + L H
Sbjct: 172 WPLMSPLPSYGYGREHKGPRYGSLIHGQDLKHVTITGHNGTINGQGQSWWVKFRRKLLNH 231
Query: 64 TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPL-NAPNTDGIDPD 122
TRG LV+LM S+NI+ISN+T R+SPFWT+H C+NV I TILAP+ APNTDGIDPD
Sbjct: 232 TRGPLVQLMRSSNIIISNITLRDSPFWTLHTYDCKNVTISETTILAPIAGAPNTDGIDPD 291
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S NV I++CYI GDD +A+KSGWD YGIA RPS+NI ++ V + +GV IGSEM
Sbjct: 292 SCENVVIKNCYISVGDDGIAIKSGWDQYGIAYGRPSANITIQNVVIRSMVSAGVSIGSEM 351
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGG+ +V V+ +HVWD+ GVRIKT GRG Y+ N+ +NI E V++ I I N+HP
Sbjct: 352 SGGVSDVLVENVHVWDSRRGVRIKTAPGRGAYVTNVIYQNITFENVRVGIVIKTDYNEHP 411
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL----LGLAPSA 298
DEG+DPKA+P I IS+ S++ + V I G+ +I +KNV+ +G+
Sbjct: 412 DEGFDPKAVPTIGNISY---TSIHGHRVRVPVRIQGS--AQIPVKNVTFHDMSIGIVDKK 466
Query: 299 K--WQCQFVSG-FTSQVFPLPCPQL 320
+QC FV G VFP+PC L
Sbjct: 467 HHVFQCSFVQGQVIGYVFPVPCKNL 491
>gi|359490611|ref|XP_002273143.2| PREDICTED: probable polygalacturonase-like, partial [Vitis
vinifera]
Length = 432
Score = 317 bits (811), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 161/331 (48%), Positives = 224/331 (67%), Gaps = 4/331 (1%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
++P I PLPSYG+GR+ GGR SLI G +LT+V+I G NGTI+GQG++WWD + + L
Sbjct: 79 DYPHIPPLPSYGKGRDG-GGRFSSLIFGTNLTDVVIIGGNGTINGQGRVWWDKFKQKKLV 137
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
TR +L+E+M S+ + ISNLT +SP W +HPVYC +V+I+GMTILAP++ PNTDGI+PD
Sbjct: 138 DTRPYLIEIMFSDQVQISNLTLIDSPSWNVHPVYCSDVIIQGMTILAPVDVPNTDGINPD 197
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S NV IEDCYI SGDD +AVKSGWD YGI P+ +I++RR++ +P + + +GSEM
Sbjct: 198 SCANVKIEDCYIVSGDDCIAVKSGWDQYGIKYGVPTRDIVIRRLTCISPDSAVIALGSEM 257
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI NV + + ++ +GVRIKT GRGGY+++I R + M+ +K ++ HP
Sbjct: 258 SGGIKNVRAEDITAINSQSGVRIKTGVGRGGYVQDIYARKMTMKTMKYVFWMTSDYGSHP 317
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL-LGLAPSA-KW 300
D+ WD KA+PKI I++ VV+ N T + L GI G +F IC+ +V++ L P +W
Sbjct: 318 DDEWDRKAIPKIENINYREVVAENVTYSARLDGIAGDKFTGICISDVTIRLTQKPKQLQW 377
Query: 301 QCQFVSGFTSQVFPLPCPQL-QNKSSSWCSF 330
C V G TSQV P C L +K C+F
Sbjct: 378 NCTNVEGVTSQVTPQSCDLLPPSKGPLQCTF 408
>gi|388520257|gb|AFK48190.1| unknown [Lotus japonicus]
Length = 482
Score = 316 bits (810), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 163/322 (50%), Positives = 220/322 (68%), Gaps = 13/322 (4%)
Query: 4 WPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKH 63
WP++ LPSYG GRE G R+ SLIHG +L +V+ITG+NGTI+GQGQ WW + + L H
Sbjct: 138 WPLMPALPSYGYGREHPGPRYGSLIHGQNLRDVVITGHNGTINGQGQSWWTKYREKLLNH 197
Query: 64 TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPL-NAPNTDGIDPD 122
TRG LV++M S++I+I+N+T R+SPFWT+HP C+NV IK +TILAP+ +APNTDGIDPD
Sbjct: 198 TRGPLVQIMWSSDIVIANITLRDSPFWTLHPYDCKNVTIKNVTILAPVYHAPNTDGIDPD 257
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S ++ IEDCYI GDD +A+KSGWD YGIA +PS NII+R + + +G+ IGSEM
Sbjct: 258 SCEDMLIEDCYISVGDDAIAIKSGWDQYGIAYGKPSKNIIIRNLVVRSNVSAGISIGSEM 317
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGG+ NVTV+ + VW++ +RIKT GRGGY+ IT RN+ V++ I I N+HP
Sbjct: 318 SGGVSNVTVENVLVWESRRAIRIKTAPGRGGYMRQITYRNLTFNNVRVGIVIKTNYNEHP 377
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL----LGLAPSA 298
D G+DP A P + ISF+NV + PV I G++ EI ++NV+ +G+
Sbjct: 378 DAGYDPLAFPVLSDISFINVRG-QGVRVPVR--IEGSK--EISVRNVTFQDMNVGITYKK 432
Query: 299 K--WQCQFVSG-FTSQVFPLPC 317
K +QC FV G +FP PC
Sbjct: 433 KHIFQCAFVEGRVIGTIFPAPC 454
>gi|357478841|ref|XP_003609706.1| hypothetical protein MTR_4g120730 [Medicago truncatula]
gi|355510761|gb|AES91903.1| hypothetical protein MTR_4g120730 [Medicago truncatula]
Length = 459
Score = 316 bits (809), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 153/328 (46%), Positives = 218/328 (66%), Gaps = 3/328 (0%)
Query: 4 WPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKH 63
W ++DPLPSYGRG E GGR+ SLI+G L +V+ITG NGTIDG G WW+ + + +L +
Sbjct: 114 WDVLDPLPSYGRGLEVPGGRYQSLINGYMLQDVVITGNNGTIDGMGSTWWESFSSHSLNY 173
Query: 64 TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDS 123
+R HLVEL+ S ++++SNLTF N+P + IHPVYCRNV I ++I AP +P T GI PDS
Sbjct: 174 SRPHLVELVASTDVVVSNLTFLNAPAYNIHPVYCRNVHIHNISIFAPPESPYTVGIVPDS 233
Query: 124 STNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMS 183
S +VCIEDC I +G D +A+KSGWD YGIA RP+ N+ +RRV S + GS+MS
Sbjct: 234 SDHVCIEDCTIATGYDAIALKSGWDEYGIAYGRPTENVHIRRVHLQASYGSTLAFGSDMS 293
Query: 184 GGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPD 243
GGI NV V+ +H++++ G+ +T +GRGGY+++I + +I+M+ + I + HPD
Sbjct: 294 GGISNVFVEHVHLYNSKGGIEFRTIRGRGGYMKDIILSDIEMKNIYRAISATGYCGSHPD 353
Query: 244 EGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL-LGLAPSAKWQC 302
+ +DP ALP + F +++ N T A AG+ + F IC+ N++L + A S W+C
Sbjct: 354 DKFDPNALPLLDHFIFQDIIGTNITIAGSFAGLQESPFTNICLSNITLSVNYASSTSWEC 413
Query: 303 QFVSGFTSQVFPLPCPQLQNKS--SSWC 328
VSGF+ V P+PCP L + S SS C
Sbjct: 414 SNVSGFSDSVLPIPCPDLDSPSNYSSSC 441
>gi|357158595|ref|XP_003578178.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 532
Score = 316 bits (809), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 165/325 (50%), Positives = 217/325 (66%), Gaps = 13/325 (4%)
Query: 4 WPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKH 63
WP++ PLPSYG GRE G R+ SLIHG L +V +TG+NGTI+GQG+ WW + + L H
Sbjct: 188 WPLMPPLPSYGYGREHKGPRYGSLIHGQDLKDVTVTGHNGTINGQGKSWWTKFRRKLLNH 247
Query: 64 TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPL-NAPNTDGIDPD 122
TRG LV+LM S+NI+ISN+T ++SPFWT+H C+NV I TILAP+ APNTDGIDPD
Sbjct: 248 TRGPLVQLMRSSNIIISNITLQDSPFWTLHTYDCKNVTISETTILAPIVGAPNTDGIDPD 307
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S NV I++CYI GDD VA+KSGWD YGIA RPS+NI +R V+ + +GV IGSEM
Sbjct: 308 SCENVMIQNCYISVGDDGVAIKSGWDQYGIAYGRPSTNITIRDVTIRSMVSAGVSIGSEM 367
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGG+ NV V+ +H+W + GVRIKT GRG Y+ NI RNI +E V++ I I N+HP
Sbjct: 368 SGGVSNVLVENVHIWSSRRGVRIKTAPGRGAYVNNIVYRNITLENVRVGIVIKTDYNEHP 427
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLA------P 296
DEG++PKA+P + IS+ S++ V I G+ EI +KNV+ ++
Sbjct: 428 DEGFNPKAVPIVGNISY---TSIHGQGVRVPVRIQGS--AEIPVKNVTFHDMSVGILDKK 482
Query: 297 SAKWQCQFVSG-FTSQVFPLPCPQL 320
+QC +V G VFP+PC L
Sbjct: 483 HHVFQCSYVQGQVIGYVFPVPCKNL 507
>gi|357443847|ref|XP_003592201.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355481249|gb|AES62452.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 478
Score = 315 bits (808), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 157/323 (48%), Positives = 215/323 (66%), Gaps = 2/323 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
EWP + LPSYGRGR+ GR SLI G +LT+VIITG NGTIDGQG WWD + + L
Sbjct: 128 EWPQLLVLPSYGRGRDAPAGRFSSLIFGTNLTDVIITGDNGTIDGQGSYWWDKFHKKQLT 187
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
TR +++E+M S+ I ISNLT NSP W +HP+Y N++I G+TILAP+++PNTDGI+PD
Sbjct: 188 LTRPYMIEIMYSDQIQISNLTLINSPTWFVHPIYSSNIIINGLTILAPVDSPNTDGINPD 247
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S TNV IED +I SGDD +A+KSGWD YGI + PS II+RR++ +P + V +GSEM
Sbjct: 248 SCTNVRIEDNFIVSGDDCIAIKSGWDEYGIKVGMPSQQIIIRRLTCISPDSAMVALGSEM 307
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI +V ++ + + + +RIK+ GRG ++++I ++ + + +K ++ DHP
Sbjct: 308 SGGIQDVRIEDVTAINTESAIRIKSAVGRGAFVKDIFVKGMDLNTMKYVFWMTGSYGDHP 367
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAK--W 300
D G+DP ALPKI GI++ +V + N T A L GI F IC+ NV++ A K W
Sbjct: 368 DNGFDPNALPKISGINYRDVTAKNVTIAGKLEGISNDPFTGICVSNVTIEMSAHKKKLPW 427
Query: 301 QCQFVSGFTSQVFPLPCPQLQNK 323
C +SG TS V P PC LQ K
Sbjct: 428 NCTDISGVTSNVVPKPCELLQEK 450
>gi|356530824|ref|XP_003533980.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 476
Score = 315 bits (807), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 152/328 (46%), Positives = 214/328 (65%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
EWP + LPSYGRGR+ GR SLI G +LT+V+ITGYNGTIDGQG WWD + LK
Sbjct: 126 EWPTLPVLPSYGRGRDAPDGRFSSLIFGTNLTDVVITGYNGTIDGQGSYWWDKFHKGELK 185
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
TR +++E+M S++I ISNLT +SP W +HP+Y +++I+G+TILAP+++PNTDGI+PD
Sbjct: 186 LTRPYMIEIMFSDHIQISNLTLIDSPSWFVHPIYSSDIIIQGLTILAPVDSPNTDGINPD 245
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S +N IEDCYI SGDD VA+KSGWD GI PS +II+RR+ +P + + +GSEM
Sbjct: 246 SCSNTRIEDCYIVSGDDCVAIKSGWDESGIKFGMPSQHIIIRRLECVSPDSAMIALGSEM 305
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI +V ++L + + VRIKT GRG Y+ +I ++ + + +K ++ HP
Sbjct: 306 SGGIRDVRAEELTALNTQSAVRIKTAVGRGAYVRDIFVKGMNLNTMKYVFWMTGSYGSHP 365
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQC 302
+ +DPKALP I GI++ +V++ N T + L GI F IC+ NV++ +W C
Sbjct: 366 NTDFDPKALPNITGINYRDVIADNVTYSARLEGIANDPFTGICISNVTIHSGKKKPQWNC 425
Query: 303 QFVSGFTSQVFPLPCPQLQNKSSSWCSF 330
+ G TS V+P PC L K C +
Sbjct: 426 TDIEGVTSNVYPKPCELLPLKEKIECPY 453
>gi|356530447|ref|XP_003533792.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 494
Score = 315 bits (807), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 160/322 (49%), Positives = 221/322 (68%), Gaps = 13/322 (4%)
Query: 4 WPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKH 63
WP++ LPSYG GRE G R+ SLIHG +L +V+ITG+NGTI+GQGQ WW + + L H
Sbjct: 150 WPLMPALPSYGYGREHPGPRYSSLIHGQNLRDVVITGHNGTINGQGQTWWTKYRQKLLNH 209
Query: 64 TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPL-NAPNTDGIDPD 122
TRG LV+++ S+NI+ISN+T R+SPFWT+HP C+NV +K +TILAP+ +APNTDGIDPD
Sbjct: 210 TRGPLVQILWSSNIVISNITLRDSPFWTLHPYDCKNVTVKNVTILAPVSHAPNTDGIDPD 269
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S ++ IEDCYI GDD +A+KSGWD YGI RPS NI++R + + +G+ IGSEM
Sbjct: 270 SCEDMLIEDCYISVGDDAIAIKSGWDQYGITYGRPSKNIVIRNLVVRSNVSAGISIGSEM 329
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGG+ NV V+ + VW++ +RIKT GRGGY+ IT +N+ + V++ I I N+HP
Sbjct: 330 SGGVSNVLVENILVWESRRAMRIKTAPGRGGYVRQITYKNLMFKNVRVGIVIKTDYNEHP 389
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL----LGLAPSA 298
G+DP+ALP +R ISF+N+ + PV I G+ E+I ++NV+ +G+
Sbjct: 390 GTGYDPRALPILRDISFINIRG-QGVRVPVR--IQGS--EQIPVRNVTFQDMKIGITYKK 444
Query: 299 K--WQCQFVSG-FTSQVFPLPC 317
K +QC FV G +FP PC
Sbjct: 445 KHIFQCAFVQGQAIGTIFPSPC 466
>gi|19698861|gb|AAL91166.1| unknown protein [Arabidopsis thaliana]
gi|23197646|gb|AAN15350.1| unknown protein [Arabidopsis thaliana]
Length = 506
Score = 315 bits (807), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 162/322 (50%), Positives = 223/322 (69%), Gaps = 13/322 (4%)
Query: 4 WPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKH 63
WP++ PLPSYG GRER G R+ SLIHG +L +++ITG+NGTI+GQGQ WW R L +
Sbjct: 162 WPLMPPLPSYGYGRERPGPRYGSLIHGQNLKDIVITGHNGTINGQGQSWWKKHQRRLLNY 221
Query: 64 TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLN-APNTDGIDPD 122
TRG LV++M S++I+I+N+T R+SPFWT+HP C+NV I+ +TILAP+ APNTDGIDPD
Sbjct: 222 TRGPLVQIMWSSDIVIANITMRDSPFWTLHPYDCKNVTIRNVTILAPVTGAPNTDGIDPD 281
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S ++ IEDCYI +GDD +A+KSGWD +GIA RPS+NI++R + + +GV IGSEM
Sbjct: 282 SCEDMVIEDCYISTGDDAIAIKSGWDQFGIAYGRPSTNILIRNLVVRSVISAGVSIGSEM 341
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI NVT++ L +W++ G+RIKT GRGGYI NIT +N+ ++ V++ I I N+H
Sbjct: 342 SGGISNVTIENLLIWNSRRGIRIKTAPGRGGYIRNITYKNLTLDNVRVGIVIKTDYNEHA 401
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL----LGLAPSA 298
D+ +D KA P + G SF + + PV I G+ E+I ++NV+ +GL
Sbjct: 402 DDNYDRKAYPILSGFSFAGIHG-QGVRVPVR--IHGS--EQIPVRNVTFRDMSVGLTYKK 456
Query: 299 K--WQCQFVSG-FTSQVFPLPC 317
K +QC FV G +FP PC
Sbjct: 457 KHIFQCSFVKGRVFGSIFPRPC 478
>gi|15221958|ref|NP_173351.1| Pectin lyase-like protein [Arabidopsis thaliana]
gi|332191692|gb|AEE29813.1| Pectin lyase-like protein [Arabidopsis thaliana]
Length = 506
Score = 315 bits (806), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 162/322 (50%), Positives = 223/322 (69%), Gaps = 13/322 (4%)
Query: 4 WPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKH 63
WP++ PLPSYG GRER G R+ SLIHG +L +++ITG+NGTI+GQGQ WW R L +
Sbjct: 162 WPLMPPLPSYGYGRERPGPRYGSLIHGQNLKDIVITGHNGTINGQGQSWWKKHQRRLLNY 221
Query: 64 TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLN-APNTDGIDPD 122
TRG LV++M S++I+I+N+T R+SPFWT+HP C+NV I+ +TILAP+ APNTDGIDPD
Sbjct: 222 TRGPLVQIMWSSDIVIANITMRDSPFWTLHPYDCKNVTIRNVTILAPVTGAPNTDGIDPD 281
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S ++ IEDCYI +GDD +A+KSGWD +GIA RPS+NI++R + + +GV IGSEM
Sbjct: 282 SCEDMVIEDCYISTGDDAIAIKSGWDQFGIAYGRPSTNILIRNLVVRSVISAGVSIGSEM 341
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI NVT++ L +W++ G+RIKT GRGGYI NIT +N+ ++ V++ I I N+H
Sbjct: 342 SGGISNVTIENLLIWNSRRGIRIKTAPGRGGYIRNITYKNLTLDNVRVGIVIKTDYNEHA 401
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL----LGLAPSA 298
D+ +D KA P + G SF + + PV I G+ E+I ++NV+ +GL
Sbjct: 402 DDNYDRKAYPILSGFSFAGIHG-QGVRVPVR--IHGS--EQIPVRNVTFRDMSVGLTYKK 456
Query: 299 K--WQCQFVSG-FTSQVFPLPC 317
K +QC FV G +FP PC
Sbjct: 457 KHIFQCSFVKGRVFGSIFPRPC 478
>gi|356558431|ref|XP_003547510.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 489
Score = 315 bits (806), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 160/322 (49%), Positives = 222/322 (68%), Gaps = 13/322 (4%)
Query: 4 WPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKH 63
WP++ LPSYG GRE G R+ SLIHG +L +V+ITG+NGTI+GQGQ WW + + L H
Sbjct: 145 WPLMPALPSYGYGREHPGPRYSSLIHGQNLVDVVITGHNGTINGQGQTWWTKYRQKLLNH 204
Query: 64 TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPL-NAPNTDGIDPD 122
TRG LV+++ S+NI+ISN+T R+SPFWT+HP C+NV +K +TILAP+ +APNTDGIDPD
Sbjct: 205 TRGPLVQILWSSNIVISNITLRDSPFWTLHPYDCKNVTVKKVTILAPVSHAPNTDGIDPD 264
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S ++ IEDCYI GDD +A+KSGWD YGI RPS NI++R + + +G+ IGSEM
Sbjct: 265 SCEDMLIEDCYISVGDDAIAIKSGWDQYGITYGRPSKNIVIRNLVVRSNVSAGISIGSEM 324
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGG+ NV V+ + VW++ +RIKT GRGGY+ IT +N+ ++ V++ I I N+HP
Sbjct: 325 SGGVSNVLVENILVWESRRAMRIKTAPGRGGYVRQITYKNLMLKNVRVGIVIKTDYNEHP 384
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL----LGLAPSA 298
G+DP+ALP +R ISF+N+ + PV I G+ E+I ++NV+ +G+
Sbjct: 385 GAGYDPRALPILRDISFMNIRG-QGVRVPVR--IQGS--EQIPVRNVTFQDMKVGITYKK 439
Query: 299 K--WQCQFVSG-FTSQVFPLPC 317
K +QC FV G +FP PC
Sbjct: 440 KHIFQCAFVQGQAIGTIFPSPC 461
>gi|115486511|ref|NP_001068399.1| Os11g0658800 [Oryza sativa Japonica Group]
gi|77552386|gb|ABA95183.1| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113645621|dbj|BAF28762.1| Os11g0658800 [Oryza sativa Japonica Group]
gi|222616379|gb|EEE52511.1| hypothetical protein OsJ_34717 [Oryza sativa Japonica Group]
Length = 449
Score = 315 bits (806), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 151/325 (46%), Positives = 216/325 (66%), Gaps = 2/325 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
+WPI++PLPSYG+G + G RH SLI+G +L++V+ITG NG IDGQG +WWD + L
Sbjct: 108 QWPIVEPLPSYGQGLDLPGPRHRSLINGYNLSDVVITGNNGVIDGQGSVWWDWLHSHELN 167
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
H+R H+VE ++S ++ISNLTF NSP W+IHPVYC NV + +TI L+AP TDGI PD
Sbjct: 168 HSRPHIVEFLHSEEVVISNLTFLNSPAWSIHPVYCSNVKVHNVTIKTSLDAPLTDGIVPD 227
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S +NVCIED I G D +++KSGWD+YGI+ RP+S+I + RV + + + IGSEM
Sbjct: 228 SCSNVCIEDSSISVGHDAISLKSGWDNYGISFGRPTSDIHISRVDLQASSGAALAIGSEM 287
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI ++ VD + + ++ G+ +T GRGGYI + + ++ M+ V + I + + HP
Sbjct: 288 SGGISDIHVDHIRIGSSSKGISFRTTPGRGGYIAEVVVADVVMDSVHLAIEFTGNWSSHP 347
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV--SLLGLAPSAKW 300
D+ +DP LP I I+ N+ N + A VL+GI G F IC+ N+ S+ LAPS+ W
Sbjct: 348 DDHFDPSFLPVIDQITLKNMEGTNISVAGVLSGIEGDPFSAICLSNLNFSIADLAPSSAW 407
Query: 301 QCQFVSGFTSQVFPLPCPQLQNKSS 325
C V G++ VFP PC +L + S+
Sbjct: 408 TCSNVHGYSELVFPKPCSELHDTST 432
>gi|297597216|ref|NP_001043594.2| Os01g0618900 [Oryza sativa Japonica Group]
gi|54290860|dbj|BAD61521.1| polygalacturonase-like [Oryza sativa Japonica Group]
gi|255673471|dbj|BAF05508.2| Os01g0618900 [Oryza sativa Japonica Group]
Length = 308
Score = 314 bits (805), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 155/308 (50%), Positives = 220/308 (71%), Gaps = 2/308 (0%)
Query: 25 ISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKHTRGHLVELMNSNNILISNLTF 84
+SLIHG+ L +V+ITG NGTIDGQG WWD+W TL TR HL+ELMNS+++++SN+ F
Sbjct: 1 MSLIHGNGLQDVVITGDNGTIDGQGSAWWDMWKKGTLPFTRPHLLELMNSSDVVVSNVVF 60
Query: 85 RNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVK 144
++SPFW IHPVYC NVVI+ +T+LAP ++PNTDGIDPDSS+NVCIEDCYI +GDDL+A+K
Sbjct: 61 QDSPFWNIHPVYCSNVVIRNVTVLAPHDSPNTDGIDPDSSSNVCIEDCYISTGDDLIAIK 120
Query: 145 SGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVR 204
SGWD YG+A RPSS+I +RR++G++P +G +GSE SGG+ +V + L+ + + G+
Sbjct: 121 SGWDEYGMAYGRPSSHITIRRITGSSP-FAGFAVGSETSGGVEHVLAEHLNFFSSGFGIH 179
Query: 205 IKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVS 264
IKT+ GRGG+I N+T+ ++ ++ V+ +RI+ HPD+ +D ALP + G++ NV
Sbjct: 180 IKTNTGRGGFIRNVTVSDVTLDSVRYGLRIAGDVGGHPDDRYDRNALPVVDGLTIKNVQG 239
Query: 265 VNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQCQFVSGFTSQVFPLPCPQLQNKS 324
N +A + GI + F IC+ NV L G A W+C+ VSG V P PC +L + S
Sbjct: 240 QNIREAGSIKGIATSAFSRICLSNVKLNGGAAVRPWKCEAVSGAALDVQPSPCTELTSTS 299
Query: 325 S-SWCSFS 331
S+C+ S
Sbjct: 300 GMSFCTNS 307
>gi|297844882|ref|XP_002890322.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297336164|gb|EFH66581.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 506
Score = 314 bits (805), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 161/322 (50%), Positives = 223/322 (69%), Gaps = 13/322 (4%)
Query: 4 WPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKH 63
WP++ PLPSYG GRE G R+ SLIHG +L +++ITG+NGTI+GQGQ WW + R L +
Sbjct: 162 WPLMPPLPSYGYGREHPGPRYGSLIHGQNLKDIVITGHNGTINGQGQSWWKKYQRRLLNY 221
Query: 64 TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLN-APNTDGIDPD 122
TRG LV++M S++I+I+N+T R+SPFWT+HP C+NV I+ +TILAP+ APNTDGIDPD
Sbjct: 222 TRGPLVQIMWSSDIVIANITMRDSPFWTLHPYDCKNVTIRNVTILAPVTGAPNTDGIDPD 281
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S ++ IEDCYI +GDD +A+KSGWD +GIA RPS+NI++R + + +GV IGSEM
Sbjct: 282 SCEDMVIEDCYISTGDDAIAIKSGWDQFGIAYGRPSTNILIRNLVVRSVISAGVSIGSEM 341
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI NVT++ L +W++ G+RIKT GRGGYI NIT +N+ ++ V++ I I N+H
Sbjct: 342 SGGISNVTIENLLIWNSRRGIRIKTAPGRGGYIRNITYKNLTLDNVRVGIVIKTDYNEHA 401
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL----LGLAPSA 298
D+ +D KA P + G SF + + PV I G+ E+I ++NV+ +GL
Sbjct: 402 DDNYDRKAYPILSGFSFAGIHG-QGVRVPVR--IHGS--EQIPVRNVTFRDMSVGLTYKK 456
Query: 299 K--WQCQFVSG-FTSQVFPLPC 317
K +QC FV G +FP PC
Sbjct: 457 KHIFQCSFVKGRVFGSIFPRPC 478
>gi|8954055|gb|AAF82228.1|AC069143_4 Contains similarity to a polygalacturonase-like protein gi|7529266
from Arabidopsis thaliana BAC F18P9 gb|AL138654 and
contains multiple polygalacturonase (pectinase) PF|00295
domains [Arabidopsis thaliana]
Length = 533
Score = 314 bits (805), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 162/325 (49%), Positives = 223/325 (68%), Gaps = 13/325 (4%)
Query: 4 WPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKH 63
WP++ PLPSYG GRER G R+ SLIHG +L +++ITG+NGTI+GQGQ WW R L +
Sbjct: 189 WPLMPPLPSYGYGRERPGPRYGSLIHGQNLKDIVITGHNGTINGQGQSWWKKHQRRLLNY 248
Query: 64 TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLN-APNTDGIDPD 122
TRG LV++M S++I+I+N+T R+SPFWT+HP C+NV I+ +TILAP+ APNTDGIDPD
Sbjct: 249 TRGPLVQIMWSSDIVIANITMRDSPFWTLHPYDCKNVTIRNVTILAPVTGAPNTDGIDPD 308
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S ++ IEDCYI +GDD +A+KSGWD +GIA RPS+NI++R + + +GV IGSEM
Sbjct: 309 SCEDMVIEDCYISTGDDAIAIKSGWDQFGIAYGRPSTNILIRNLVVRSVISAGVSIGSEM 368
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI NVT++ L +W++ G+RIKT GRGGYI NIT +N+ ++ V++ I I N+H
Sbjct: 369 SGGISNVTIENLLIWNSRRGIRIKTAPGRGGYIRNITYKNLTLDNVRVGIVIKTDYNEHA 428
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL----LGLAPSA 298
D+ +D KA P + G SF + + PV I G+ E+I ++NV+ +GL
Sbjct: 429 DDNYDRKAYPILSGFSFAGIHG-QGVRVPVR--IHGS--EQIPVRNVTFRDMSVGLTYKK 483
Query: 299 K--WQCQFVSG-FTSQVFPLPCPQL 320
K +QC FV G +FP PC
Sbjct: 484 KHIFQCSFVKGRVFGSIFPRPCENF 508
>gi|359490609|ref|XP_002273177.2| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 465
Score = 314 bits (805), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 162/331 (48%), Positives = 220/331 (66%), Gaps = 6/331 (1%)
Query: 4 WPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKH 63
+P+I+ LPSYG GR+ GGRH SLI G +LT+V+ITG NGTI GQGQ WWD + LK
Sbjct: 120 YPLIEILPSYGAGRDG-GGRHASLIFGTNLTDVVITGGNGTIHGQGQYWWDKFRADKLKD 178
Query: 64 TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDS 123
TR +L+E+M S+ + ISNL +SP W +HP Y NV+I+ +TI+AP+ +PNTDGI+PDS
Sbjct: 179 TRPYLIEIMYSDQVQISNLILIDSPSWNVHPTYSSNVIIQWLTIIAPVGSPNTDGINPDS 238
Query: 124 STNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMS 183
S NV IEDC+I SGDD +AVKSGWD YGI P+ ++I+RR++ +P + + +GSEMS
Sbjct: 239 SKNVLIEDCFIVSGDDCIAVKSGWDQYGIKFGMPTEDLIIRRLTCISPDSAVIALGSEMS 298
Query: 184 GGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPD 243
GGI NV + + D+ +GVRIK+ GRGGY+++I R + M+ +K ++ HPD
Sbjct: 299 GGIKNVRAENITAIDSESGVRIKSGVGRGGYVKDIYARGMTMKTMKYVFWMTGDYGQHPD 358
Query: 244 EGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAK---W 300
+GWDPKALPKI I++ ++V+ N T + L GI G F IC+ NV +GL K W
Sbjct: 359 DGWDPKALPKIENINYRDMVAENVTYSARLDGISGDPFTGICISNVK-IGLTEKPKKLQW 417
Query: 301 QCQFVSGFTSQVFPLPCPQLQ-NKSSSWCSF 330
C V G +SQV P C L +K C F
Sbjct: 418 NCTNVEGVSSQVTPPSCDLLHPSKKVFNCPF 448
>gi|357443845|ref|XP_003592200.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355481248|gb|AES62451.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 481
Score = 314 bits (805), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 161/330 (48%), Positives = 209/330 (63%), Gaps = 2/330 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
EWP LPSYG GR GR SL+ G +LT+VIITG NGTIDGQG WWD + +K
Sbjct: 129 EWPQFPVLPSYGSGRNASDGRFSSLVFGTNLTDVIITGNNGTIDGQGSYWWDKFHKGQMK 188
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
TR +++E+M S+ I ISNLT NSP W +HPVY N++I G+TILAP++ PNTDGIDPD
Sbjct: 189 ITRPYMIEIMYSDQIQISNLTLINSPSWFVHPVYSSNIIINGLTILAPVDIPNTDGIDPD 248
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S TNV IED YI SGDD +A+KSGWD YGI +PS II+RR++ +P + V +GSEM
Sbjct: 249 SCTNVRIEDNYIVSGDDCIAIKSGWDEYGIKFGKPSQQIIIRRLTCISPKSAMVALGSEM 308
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI +V V+ + + VRIKT GRG Y+++I ++ + ++ +K ++ HP
Sbjct: 309 SGGIQDVRVEDVTAIKTESAVRIKTAIGRGAYVKDIFVKGMNLDTMKYVFWMTGSYKSHP 368
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAK--W 300
D G+DP ALPKI I++ +V + N T A L GI F IC+ N ++ A K W
Sbjct: 369 DNGFDPNALPKISEINYRDVTAKNVTIAGKLDGISNDPFTGICVSNATIEMSAHKKKLPW 428
Query: 301 QCQFVSGFTSQVFPLPCPQLQNKSSSWCSF 330
C VSG TS V P PC L K C F
Sbjct: 429 NCTDVSGVTSNVSPTPCELLAEKEKFECPF 458
>gi|225464581|ref|XP_002273669.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 478
Score = 313 bits (801), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 156/320 (48%), Positives = 220/320 (68%), Gaps = 5/320 (1%)
Query: 4 WPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKH 63
+P+I+ LPSYG GR+ GGRH SLI G +LT+V+ITG NGT++GQG+ WWD + +
Sbjct: 127 YPLIEVLPSYGVGRDG-GGRHSSLIFGTNLTDVVITGGNGTLNGQGKYWWDKFRAKKYND 185
Query: 64 TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDS 123
TR +L+E+M SN++ ISNLT +SP W +HPVY RNV++K +TILAP+++PNTDGI+PDS
Sbjct: 186 TRPYLIEIMYSNHVQISNLTLIDSPSWNVHPVYSRNVLVKDLTILAPIDSPNTDGINPDS 245
Query: 124 STNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMS 183
V IEDC+I SGDD +AVKSGWD YG P+ ++++RR++ +P + + +GSEMS
Sbjct: 246 CKKVRIEDCFIVSGDDCIAVKSGWDQYGYKFGMPTKDLLIRRLTCISPDSATIALGSEMS 305
Query: 184 GGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPD 243
GGI NV + + D +G+RIKT GRGGY+++I +R + ++ +K I+ HPD
Sbjct: 306 GGIKNVWAEDITAIDTQSGIRIKTGIGRGGYVKDIYVRRMTVKTMKYVFWITGDYGSHPD 365
Query: 244 EGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAK---W 300
+GWDPKALP I+ I++ ++V+ N T + L GI G F IC+ NV+ +GL K W
Sbjct: 366 DGWDPKALPVIKNINYRDMVAENVTYSARLDGISGDPFTGICISNVT-IGLTEKPKELQW 424
Query: 301 QCQFVSGFTSQVFPLPCPQL 320
C V+G TSQV P C L
Sbjct: 425 NCTNVAGVTSQVTPRSCDLL 444
>gi|255545184|ref|XP_002513653.1| polygalacturonase, putative [Ricinus communis]
gi|223547561|gb|EEF49056.1| polygalacturonase, putative [Ricinus communis]
Length = 473
Score = 312 bits (800), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 152/323 (47%), Positives = 210/323 (65%), Gaps = 2/323 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
EWPI+ PLPSYGRGR+ GGR SLI G +L +V+ITG NGTIDGQG WW+ + L
Sbjct: 126 EWPILPPLPSYGRGRDATGGRFSSLIFGTNLKDVVITGNNGTIDGQGATWWNKFHKGLLN 185
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
TR +L+EL+ S+ I ISNL NSP W +HP Y NV+I+G+TILAP+++PNTDGI+PD
Sbjct: 186 QTRPYLIELLYSHKIQISNLILINSPSWNVHPTYSSNVLIQGLTILAPVDSPNTDGINPD 245
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S TN IEDCYI SGDD +AVKSGWD YGI P+ +++RR++ +P + + +GSEM
Sbjct: 246 SCTNTRIEDCYIVSGDDCIAVKSGWDQYGIKFGMPTKKLVIRRLTCISPDSATIALGSEM 305
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI +V + + + +G+RIKT GRG Y+++I +R + + +K ++ HP
Sbjct: 306 SGGIQDVRAEDITAINTQSGIRIKTAAGRGAYVKDIFVRRMNFKTMKYVFWMTGSYGSHP 365
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMK--NVSLLGLAPSAKW 300
D+G+DP ALP I I++ ++V+ N T + L GI F IC+ N++L +W
Sbjct: 366 DKGYDPNALPIITRINYRDIVAENVTYSARLEGIEKDPFTGICISNANITLTKKPEKLQW 425
Query: 301 QCQFVSGFTSQVFPLPCPQLQNK 323
C + G TS V P PC L K
Sbjct: 426 NCTDIEGVTSNVNPRPCSLLPGK 448
>gi|388509890|gb|AFK43011.1| unknown [Medicago truncatula]
Length = 483
Score = 312 bits (800), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 160/324 (49%), Positives = 220/324 (67%), Gaps = 4/324 (1%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
EWP+++PLPSYGRGR+ GR SLI G +LT+VI+TG NGTIDGQG WW + + LK
Sbjct: 128 EWPVLEPLPSYGRGRDAPAGRFRSLIFGTNLTDVIVTGGNGTIDGQGAFWWQQFHRKELK 187
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+TR +L+ELM S++I ISNLT NSP W +HPVY N++I+G+TI+AP+++PNTDGI+PD
Sbjct: 188 YTRPYLIELMFSDSIQISNLTLLNSPSWNVHPVYSSNIIIQGITIIAPISSPNTDGINPD 247
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S TN IEDCYI SGDD VAVKSGWD YGI P+ +++RR++ +P + + +GSEM
Sbjct: 248 SCTNTKIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRRLTCISPFSATIALGSEM 307
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI +V + + +GVRIKT GRGGY+++I ++ M +K +++ N H
Sbjct: 308 SGGIQDVRAEDITAIRTESGVRIKTAVGRGGYVKDIYVKRFTMHTMKWAFKMTGDYNSHA 367
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAK--- 299
D +DP ALP+I I++ +VV+ N T A GI F+ IC+ NV+ LG+A AK
Sbjct: 368 DTHFDPNALPEIANINYRDVVAENVTIAARFQGIFNDPFKGICIANVT-LGMAVKAKKRS 426
Query: 300 WQCQFVSGFTSQVFPLPCPQLQNK 323
W C + G TS V P PC L ++
Sbjct: 427 WTCTDIEGMTSGVTPPPCDLLPDQ 450
>gi|356529330|ref|XP_003533248.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 452
Score = 312 bits (800), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 154/332 (46%), Positives = 217/332 (65%), Gaps = 4/332 (1%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
W +++PLPSYGRG E GGR+ SLI+G L +V++TG NGTIDG G +WWD + +L
Sbjct: 110 HWDVVEPLPSYGRGLEVPGGRYQSLINGYMLHDVVVTGNNGTIDGMGMVWWDWYSTHSLN 169
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
H+R HLVE + S+ +++SNLTF N+P ++IHPVYC +V I+ ++I P +P T GI PD
Sbjct: 170 HSRPHLVEFVASDYVVVSNLTFLNAPAYSIHPVYCSHVHIQNVSISTPPESPYTVGIVPD 229
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SS NVCIEDC + G D +++KSGWD YGIA RP+ N+ +RRV + S + GS+M
Sbjct: 230 SSDNVCIEDCIVAMGFDAISLKSGWDEYGIAYGRPTENVHIRRVQLHAFSGSALAFGSDM 289
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI NV V+ H++++ +G+ +T KGRGGY++ I + +I+ME V I + HP
Sbjct: 290 SGGISNVLVEHAHLFNSNSGIEFRTTKGRGGYMKEIVMSDIQMENVHTAIAATGNCGSHP 349
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSA-KWQ 301
D+ +DP ALP + I+ +V+ N T A LAGI + F IC+ N++L + S W
Sbjct: 350 DDKFDPNALPHLDHITLKDVIGTNITIAGNLAGIDESPFTNICLSNITLSTNSVSPITWA 409
Query: 302 CQFVSGFTSQVFPLPCPQLQN---KSSSWCSF 330
C VSGF+ V P PCP+L N SSS C +
Sbjct: 410 CSNVSGFSDSVLPEPCPELGNTSYDSSSSCFY 441
>gi|218186147|gb|EEC68574.1| hypothetical protein OsI_36908 [Oryza sativa Indica Group]
Length = 449
Score = 312 bits (799), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 150/325 (46%), Positives = 215/325 (66%), Gaps = 2/325 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
+WPI++PLPSYG+G + G RH SLI+G +L++V+ITG NG IDGQG +WWD + L
Sbjct: 108 QWPIVEPLPSYGQGLDLPGPRHRSLINGYNLSDVVITGNNGVIDGQGSVWWDWLHSHELN 167
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
H+R H+VE ++S ++ISNLTF NSP W+IHPVYC NV + +TI L+AP TDGI PD
Sbjct: 168 HSRPHIVEFLHSEEVVISNLTFLNSPAWSIHPVYCSNVKVHNVTIKTSLDAPLTDGIVPD 227
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S +NVCIED I G D +++KSGWD+YGI+ RP+S+I + RV + + + IGSEM
Sbjct: 228 SCSNVCIEDSSISVGHDAISLKSGWDNYGISFGRPTSDIHISRVDLQASSGAALAIGSEM 287
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI ++ VD + + ++ G+ +T GRGGYI + + ++ M+ V + I + + HP
Sbjct: 288 SGGISDIHVDHIRIGSSSKGISFRTTPGRGGYIAEVVVADVVMDSVHLAIEFTGNWSSHP 347
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV--SLLGLAPSAKW 300
D+ +DP LP I I+ N+ N + A VL+GI G F IC+ N+ S+ APS+ W
Sbjct: 348 DDHFDPSFLPVIDQITLKNMEGTNISVAGVLSGIEGDPFSAICLSNLNFSIADSAPSSAW 407
Query: 301 QCQFVSGFTSQVFPLPCPQLQNKSS 325
C V G++ VFP PC +L + S+
Sbjct: 408 TCSNVHGYSELVFPKPCSELHDTST 432
>gi|356534963|ref|XP_003536020.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 456
Score = 311 bits (798), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 148/329 (44%), Positives = 216/329 (65%), Gaps = 2/329 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
W +DPLPSYGRG + GR+ SLI+G +L++V+ITG N IDGQG +WWDL +L
Sbjct: 113 HWTAMDPLPSYGRGIDVPSGRYRSLIYGQNLSDVVITGDNAIIDGQGSVWWDLIGTHSLN 172
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
++R H++EL+ S+NI ISNLTF NSP W+IHPVYC NV I+ +T+ AP P T GI PD
Sbjct: 173 YSRPHIIELVGSDNITISNLTFLNSPAWSIHPVYCSNVQIQKITVHAPTEFPYTSGIVPD 232
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SS +VCI + I +G D + +KSGWD YG+A +P+S + +R V + + +G+ GSEM
Sbjct: 233 SSEHVCIYNSNISTGHDAIVLKSGWDQYGVAYGKPTSKVHIRGVYLQSSSGAGLAFGSEM 292
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI ++ +QLH+ ++ G+ +KT KGRGGY++NI I + K+E + + I ++ S HP
Sbjct: 293 SGGISDIIAEQLHITNSTIGIELKTTKGRGGYMKNIFISDAKLENIYLGISMTGSSGSHP 352
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL--LGLAPSAKW 300
D+ +DP A+P + ++F NV+ N A +GI+ + F IC+ N + + S W
Sbjct: 353 DDKYDPNAVPDVGNVTFENVIGTNIAIAGNFSGIVDSPFTPICLLNATFSSSSESSSPSW 412
Query: 301 QCQFVSGFTSQVFPLPCPQLQNKSSSWCS 329
C + G + +VFP PCP LQN S++ S
Sbjct: 413 FCSDIMGISEEVFPEPCPDLQNTYSNFSS 441
>gi|356519942|ref|XP_003528627.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 449
Score = 311 bits (798), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 148/324 (45%), Positives = 217/324 (66%), Gaps = 1/324 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
W ++DPLPSYGRG E GGR+ SLI+G+ L +V+ITG NG IDG G WW+L+ + +L
Sbjct: 112 HWEVVDPLPSYGRGVEVPGGRYQSLINGNMLHDVVITGNNGNIDGMGFAWWELFSSHSLN 171
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
++R HL+EL+ S+++++SNLTF N+P ++IHPVYC NV I ++I AP +PNT GI PD
Sbjct: 172 YSRPHLIELVASDHVVVSNLTFLNAPAYSIHPVYCSNVHIHNVSISAPPESPNTVGIVPD 231
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SS +VCIEDC I +G D +++KSGWD YGIA RP+ N+ +RRV + S + GS+M
Sbjct: 232 SSDHVCIEDCVIATGYDAISLKSGWDEYGIAYGRPTENVHIRRVHLQASSGSTIAFGSDM 291
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI N+ V+ +H++++ +G+ +T +GRGGY++ I I +I+ME + I + HP
Sbjct: 292 SGGISNILVENVHLYNSKSGIEFRTMRGRGGYMKEIIISDIEMENIYTAIAATGYCGSHP 351
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL-LGLAPSAKWQ 301
D+ +DP ALP + I +++ N T A AG+ + F IC+ N++L S W+
Sbjct: 352 DDKFDPNALPLLDHIILQDMIGTNITIAGSFAGLQESPFTNICLSNITLSTNSVSSIPWE 411
Query: 302 CQFVSGFTSQVFPLPCPQLQNKSS 325
C VSGF+ V P PCP L+ S+
Sbjct: 412 CSNVSGFSDYVLPKPCPDLETLSN 435
>gi|297821649|ref|XP_002878707.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297324546|gb|EFH54966.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 477
Score = 311 bits (798), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 151/332 (45%), Positives = 220/332 (66%), Gaps = 4/332 (1%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
E+P++ PLPSYG+GR+ G SLI G +LT+V+ITG NGTI+GQG+ WW + + K
Sbjct: 129 EYPVVAPLPSYGQGRDAAGPTFASLISGTNLTDVVITGNNGTINGQGKYWWVKYRSGGFK 188
Query: 63 H-TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDP 121
+ TR + +E+M S N+ ISN+T +SP W IHPVYC NV++KG+TILAP+++PNTDGI+P
Sbjct: 189 NITRPYTIEIMFSQNVQISNITIIDSPAWNIHPVYCNNVIVKGVTILAPIDSPNTDGINP 248
Query: 122 DSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSE 181
DS TN IEDCY+ SGDD +AVKSGWD +GI + P+ + +RR++ +P +G+ +GSE
Sbjct: 249 DSCTNTLIEDCYVVSGDDCIAVKSGWDQFGIKVGMPTKQLSIRRLTCISPDSAGIALGSE 308
Query: 182 MSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDH 241
MSGGI +V ++ + + + +RIKT GRGGY+++I R M+ +K +S N H
Sbjct: 309 MSGGIKDVRIEDITLLQTQSAIRIKTAVGRGGYVKDIFARRFTMKTMKYVFWMSGAYNQH 368
Query: 242 PDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAK-- 299
P G+DPKA+P+I I++ ++ + N T+ L G F +ICM N+ + A K
Sbjct: 369 PASGFDPKAMPEITNINYRDMTADNVTQPARLDGFKNDPFTKICMSNIKIDLAAEPKKLL 428
Query: 300 WQCQFVSGFTSQVFPLPCPQLQNKSSSW-CSF 330
W C +SG +S+V P PC L K + C+F
Sbjct: 429 WNCTNISGVSSKVTPKPCSLLPEKGAPVDCAF 460
>gi|224107034|ref|XP_002314352.1| predicted protein [Populus trichocarpa]
gi|222863392|gb|EEF00523.1| predicted protein [Populus trichocarpa]
Length = 435
Score = 311 bits (797), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 149/323 (46%), Positives = 215/323 (66%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
W ++DPLPSYGRG E G R+ SLI+GD LT+V++TG NGTIDGQG +WWD + + +L
Sbjct: 112 HWDLVDPLPSYGRGIELPGKRYRSLINGDMLTDVVVTGDNGTIDGQGSVWWDWFESHSLN 171
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
++R HLVE +S+ +++SNLTF N+P + IHPVYC NV+++ +++ AP +P T GI PD
Sbjct: 172 YSRPHLVEFTSSDLVVVSNLTFLNAPAYNIHPVYCSNVLVQNISVSAPGESPYTIGIVPD 231
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SS NVCIED I+ G D +++KSGWD YGIA RP+ ++ +RRV + + S + GSEM
Sbjct: 232 SSNNVCIEDSLIKVGYDAISLKSGWDEYGIAYDRPTQDVHIRRVYLQSSSGSSIAFGSEM 291
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI NV V+Q++++++ +G+ +T KGRGGYI+ I I N++++ + + HP
Sbjct: 292 SGGISNVYVEQVYLYNSFSGIEFRTTKGRGGYIKRIIISNVELKNINMAFGAIGDCGSHP 351
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQC 302
D+ +DP A+P + I+ NV N T A G+ + F IC+ NVSL A S W C
Sbjct: 352 DDSFDPNAIPILDQITLQNVTGSNITMAGNFTGLAESPFTSICLFNVSLTIPATSTSWTC 411
Query: 303 QFVSGFTSQVFPLPCPQLQNKSS 325
V GF+ V P PCP+L + S
Sbjct: 412 SNVIGFSEFVSPEPCPELNSSYS 434
>gi|357507519|ref|XP_003624048.1| Polygalacturonase [Medicago truncatula]
gi|355499063|gb|AES80266.1| Polygalacturonase [Medicago truncatula]
Length = 483
Score = 311 bits (797), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 160/324 (49%), Positives = 220/324 (67%), Gaps = 4/324 (1%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
EWP+++PLPSYGRGR+ GR SLI G +LT+VI+TG NGTIDGQG WW + + LK
Sbjct: 128 EWPVLEPLPSYGRGRDAPAGRFRSLIFGTNLTDVIVTGGNGTIDGQGAFWWQQFHRKKLK 187
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+TR +L+ELM S++I ISNLT NSP W +HPVY N++I+G+TI+AP+++PNTDGI+PD
Sbjct: 188 YTRPYLIELMFSDSIQISNLTLLNSPSWNVHPVYSSNIIIQGITIIAPISSPNTDGINPD 247
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S TN IEDCYI SGDD VAVKSGWD YGI P+ +++RR++ +P + + +GSEM
Sbjct: 248 SCTNTKIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRRLTCISPFSATIALGSEM 307
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI +V + + +GVRIKT GRGGY+++I ++ M +K +++ N H
Sbjct: 308 SGGIQDVRAEDITAIRTESGVRIKTAVGRGGYVKDIYVKRFTMHTMKWAFKMTGDYNSHA 367
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAK--- 299
D +DP ALP+I I++ +VV+ N T A GI F+ IC+ NV+ LG+A AK
Sbjct: 368 DTHFDPNALPEIANINYRDVVAENVTIAARFQGISNDPFKGICIANVT-LGMAVKAKKRS 426
Query: 300 WQCQFVSGFTSQVFPLPCPQLQNK 323
W C + G TS V P PC L ++
Sbjct: 427 WTCTDIEGMTSGVTPPPCDLLPDQ 450
>gi|255541678|ref|XP_002511903.1| polygalacturonase, putative [Ricinus communis]
gi|223549083|gb|EEF50572.1| polygalacturonase, putative [Ricinus communis]
Length = 472
Score = 311 bits (797), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 152/326 (46%), Positives = 217/326 (66%), Gaps = 13/326 (3%)
Query: 1 MDEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRT 60
+ EWP++ PLPSYGRGR+ GR+ SLI G +LT++I+TG NGTIDGQG WW +
Sbjct: 125 LKEWPLLKPLPSYGRGRDAAAGRYSSLIFGTNLTDIIVTGNNGTIDGQGAFWWQQFKKGK 184
Query: 61 LKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGID 120
LK+TR +L+E+M S+NI ISNLT NSP W +HPVY N++I+G+TI+AP+ +PNTDGI+
Sbjct: 185 LKYTRPYLIEIMYSDNIQISNLTLLNSPSWNVHPVYSSNILIQGITIIAPVTSPNTDGIN 244
Query: 121 PDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGS 180
P DCYI SGDD VAVKSGWD YGIA P+ +++RR++ +P + + +GS
Sbjct: 245 P---------DCYIISGDDCVAVKSGWDEYGIAFGMPTKQLVIRRLTCISPYSATIALGS 295
Query: 181 EMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSND 240
EMSGGI +V + + +GVRIKT GRGGY+++I ++ + M +K ++
Sbjct: 296 EMSGGIQDVRAEDITAIHTESGVRIKTAVGRGGYVKDIYVKRMTMHTMKWAFWMTGNYGS 355
Query: 241 HPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAK- 299
H D+ +DP ALP I GI++ ++V+ N + A L GI G F++IC+ NV+ +G+A AK
Sbjct: 356 HADKNYDPNALPVIEGINYRDMVADNVSMAARLEGISGDPFKQICISNVT-IGMAAKAKK 414
Query: 300 --WQCQFVSGFTSQVFPLPCPQLQNK 323
W C + G T+ V P PC L ++
Sbjct: 415 IPWTCTDIEGITTGVSPRPCDLLPDQ 440
>gi|147795580|emb|CAN69988.1| hypothetical protein VITISV_024399 [Vitis vinifera]
Length = 509
Score = 311 bits (797), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 167/341 (48%), Positives = 223/341 (65%), Gaps = 29/341 (8%)
Query: 4 WPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKH 63
WP++ PLPSYG GRE G R+ SLIHG +L +V++TG+NGTI+GQGQ WW + + L H
Sbjct: 149 WPLMPPLPSYGYGREHRGARYGSLIHGQNLKDVVVTGHNGTINGQGQTWWKKYRQKLLNH 208
Query: 64 TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPL-NAPNTDGIDP- 121
TRG LV++M S++I+ISN+T R+SPFWT+HP C+NV IK +TILAP+ APNTDGIDP
Sbjct: 209 TRGPLVQIMWSSDIVISNITLRDSPFWTLHPYDCKNVTIKNVTILAPIFEAPNTDGIDPG 268
Query: 122 ---------------DSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRV 166
+S ++ IEDCYI GDD +A+KSGWD YG+A RPS NI++R +
Sbjct: 269 KVTCTLYYFSDCICPNSCEDMVIEDCYISVGDDGIAIKSGWDQYGVAYGRPSVNILIRNL 328
Query: 167 SGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKME 226
+ +GV IGSEMSGG+ NVTV+ L VW++ VRIKT GRGGY+++I RN+ +
Sbjct: 329 VIRSMVSAGVSIGSEMSGGVSNVTVENLLVWNSRRAVRIKTSPGRGGYVQHINYRNLTFD 388
Query: 227 RVKIPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICM 286
V++ I I N+HPD+G+DPKALP + ISF V + PV I G+ EEI +
Sbjct: 389 NVRVGIVIKTDYNEHPDDGFDPKALPILEDISFTGVHG-QGVRVPVR--IHGS--EEIPV 443
Query: 287 KNVSL----LGLAPSAK--WQCQFVSG-FTSQVFPLPCPQL 320
K V+ +G+ K +QC +V G VFP PC L
Sbjct: 444 KKVTFRDMSVGITYKKKHIFQCAYVEGRVIGTVFPAPCENL 484
>gi|224130360|ref|XP_002328589.1| predicted protein [Populus trichocarpa]
gi|222838571|gb|EEE76936.1| predicted protein [Populus trichocarpa]
Length = 450
Score = 311 bits (796), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 150/326 (46%), Positives = 216/326 (66%), Gaps = 2/326 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
W ++DPLPSYGRG E G R+ SLI+GD L +V++TG NGTIDGQG +WWD + + +L
Sbjct: 114 HWDLVDPLPSYGRGIELPGKRYQSLINGDMLHDVVVTGDNGTIDGQGSVWWDWFESHSLN 173
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
++R HLVE +S+ +++SNLTF N+P ++IHPVYC NVV++ +++ AP +P T GI PD
Sbjct: 174 YSRPHLVEFTSSDYVVVSNLTFLNAPAYSIHPVYCSNVVVQNISVSAPGESPYTIGIVPD 233
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SS NVCIED IE G D +++KSGWD YGIA RP++++ +RRV + + S V GSEM
Sbjct: 234 SSNNVCIEDSRIEVGYDAISLKSGWDEYGIAYDRPTTDVYIRRVYLQSSSGSSVAFGSEM 293
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI NV V+Q+H++++ +G+ +T KGRGGYI+ I I +++++ HP
Sbjct: 294 SGGISNVHVEQVHIYNSFSGIEFRTTKGRGGYIKRIIISDVELKNTNTAFGAIGDCGSHP 353
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQC 302
D+ +DP A+P + I+ V+ N T A G+ + F +C+ NVSL + W C
Sbjct: 354 DDNFDPNAIPVLDQITLQGVIGSNITMAGNFTGLAESPFTSLCLFNVSLAIRNTLSPWTC 413
Query: 303 QFVSGFTSQVFPLPCPQLQNKSSSWC 328
V GF+ V P PCP+L+ SSS C
Sbjct: 414 SNVVGFSESVSPEPCPELE--SSSVC 437
>gi|357504351|ref|XP_003622464.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355497479|gb|AES78682.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 479
Score = 310 bits (793), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 158/322 (49%), Positives = 217/322 (67%), Gaps = 2/322 (0%)
Query: 1 MDEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRT 60
++EWP+I PLPSYGRGR+ GRH SLI G +LT+VI+TG NGTIDGQG WW + N+
Sbjct: 126 INEWPVIKPLPSYGRGRDAAAGRHTSLIFGTNLTDVIVTGDNGTIDGQGSFWWQQFHNKK 185
Query: 61 LKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGID 120
LK+TR +L+ELM S+NI ISNLT +SP W IHPVY N++IKG+TI+AP+ +PNTDGI+
Sbjct: 186 LKYTRPYLIELMFSDNIQISNLTLLDSPSWNIHPVYSSNIIIKGITIIAPIRSPNTDGIN 245
Query: 121 PDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGS 180
PDS TN IEDCYI SGDD VAVKSGWD YGI P+ +++RR++ +P + + +GS
Sbjct: 246 PDSCTNTKIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRRLTCISPYSATIALGS 305
Query: 181 EMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSND 240
EMSGGI +V + + +G+RIKT GRGGY+++I ++ + M +K I+
Sbjct: 306 EMSGGIQDVRAEDITAVHTESGIRIKTAVGRGGYVKDIYVKKMTMHTMKWAFWITGNYGS 365
Query: 241 HPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAK- 299
H D+ ++ ALP+I+ I + ++V+ N + A L GI F IC+ NV++ A + K
Sbjct: 366 HADKNYNHSALPEIKNIHYRDMVADNVSMAGNLEGISNDPFTGICISNVTITMAAKAKKQ 425
Query: 300 -WQCQFVSGFTSQVFPLPCPQL 320
W C + G TS V P PC L
Sbjct: 426 PWTCNDIEGITSGVTPKPCDLL 447
>gi|357137810|ref|XP_003570492.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 496
Score = 310 bits (793), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 163/329 (49%), Positives = 219/329 (66%), Gaps = 7/329 (2%)
Query: 4 WPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKH 63
W ++ LPSYG GRER G R+ SLIHG +L +V+ITGYNG+I+GQG++WW R LK+
Sbjct: 152 WTLMPALPSYGYGRERKGPRYGSLIHGQNLKDVVITGYNGSINGQGEVWWLKHRRRMLKN 211
Query: 64 TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLN-APNTDGIDPD 122
TR LV+LM S++I+++N+T RNSPFW HP C NV + +TILAP++ APNTDGIDPD
Sbjct: 212 TRPPLVQLMWSSDIIVTNITLRNSPFWHFHPYDCTNVTVSNVTILAPVSGAPNTDGIDPD 271
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S +V IE+CYI GDD +AVKSGWD YGIA RPSSNI++R V+ + +G+ IGSEM
Sbjct: 272 SCQDVLIENCYISVGDDAIAVKSGWDQYGIAYGRPSSNILIRNVAVRSLVSAGISIGSEM 331
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGG+ NVTV+ + +WD+ GVRIKT GRGGYI NI+ RNI + V+ I I N+H
Sbjct: 332 SGGVANVTVENVRIWDSRRGVRIKTATGRGGYIRNISYRNITFDNVRAGIVIKVDYNEHA 391
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLA-GIIGTQFEEICMKNVSLLGLAPSAK-- 299
D+G+D A P I GISF + + PV A G +++ +++S +G++ K
Sbjct: 392 DDGYDRNAFPDITGISFKEIHGWG-VRVPVRAHGSNIIPIKDVTFQDMS-VGISYKKKHI 449
Query: 300 WQCQFVSG-FTSQVFPLPCPQLQNKSSSW 327
+QC ++ G VFP PC L W
Sbjct: 450 FQCSYIEGRVIGSVFPKPCENLDVYDEQW 478
>gi|356558153|ref|XP_003547372.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 579
Score = 309 bits (792), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 152/332 (45%), Positives = 218/332 (65%), Gaps = 4/332 (1%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
W +++PLPSYGRG E GGR+ SLI+G L +V++TG NGTIDG G +WWD + +L
Sbjct: 237 HWDVVEPLPSYGRGLEVPGGRYQSLINGYMLHDVVVTGNNGTIDGMGMVWWDWYSTHSLN 296
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
H+R HLVE++ S+ +++SNLTF N+P ++IHPVYC +V I+ ++I P +P T GI PD
Sbjct: 297 HSRPHLVEIVASDYVVVSNLTFLNAPAYSIHPVYCSHVHIQNVSISTPPESPYTVGIVPD 356
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SS NVCIEDC + G D +++KSGWD YGIA RP+ N+ +RRV + S + GS+M
Sbjct: 357 SSDNVCIEDCIVAMGFDAISLKSGWDEYGIAYGRPTENVHIRRVHLHAFSGSALAFGSDM 416
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI NV V+ H++++ +G+ +T KGRGGY++ I + +I+ME V I + HP
Sbjct: 417 SGGISNVLVEHAHLFNSKSGIEFRTTKGRGGYMKEIVMSDIQMENVHTAIAATGNCGSHP 476
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSA-KWQ 301
D+ +DP ALP + I+ +V N + A +AGI + F IC+ N++L + S W+
Sbjct: 477 DDKFDPNALPHLDHITLKDVTGTNISIAGNIAGIEESPFTNICLSNITLSTNSVSPITWE 536
Query: 302 CQFVSGFTSQVFPLPCPQLQN---KSSSWCSF 330
C VSGF+ V P PCP+L N SSS C +
Sbjct: 537 CSNVSGFSDSVLPEPCPELGNPSYDSSSSCFY 568
>gi|109509138|gb|ABG34278.1| polygalacturonase [Eucalyptus globulus subsp. globulus]
Length = 307
Score = 308 bits (789), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 145/273 (53%), Positives = 197/273 (72%), Gaps = 2/273 (0%)
Query: 49 GQMWWDLWWNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTIL 108
G MWW+ + N+TL +TR HLVELMNS ++ISNLTF NSPFWTIHP+YC +V+++ +TI
Sbjct: 1 GSMWWERFRNKTLDYTRPHLVELMNSTGVVISNLTFLNSPFWTIHPIYCSHVIVQNVTIR 60
Query: 109 APLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSG 168
APL++PNTDGIDPDSS +VCIEDCYI +GDD++A+KSGWD YGI+ RPS NII+RR+ G
Sbjct: 61 APLDSPNTDGIDPDSSDDVCIEDCYISTGDDVIAIKSGWDEYGISYGRPSKNIIIRRLIG 120
Query: 169 TTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERV 228
T + SG+ IGSEMSGG+ +V + + +++ G+RIKT GRGGY+ NI I N+ + V
Sbjct: 121 ETHS-SGIAIGSEMSGGVSDVHAEDIVFFNSTTGIRIKTSPGRGGYVRNIFISNVSLANV 179
Query: 229 KIPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKN 288
K+ IR + +HPDE +DPKA+PKI I+F ++ N T A ++ GI G F IC+ N
Sbjct: 180 KVAIRFTGRYGEHPDESYDPKAMPKIERITFKDIHGENITVAGLMEGIEGDNFINICLYN 239
Query: 289 VSLLGLAPSAKWQCQFVSGFTSQVFPLPCPQLQ 321
++ L + + W C V GF+S VFP C L+
Sbjct: 240 IT-LSVNSISPWNCSNVQGFSSLVFPQTCELLE 271
>gi|356564613|ref|XP_003550546.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 460
Score = 308 bits (789), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 147/323 (45%), Positives = 214/323 (66%), Gaps = 1/323 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
W ++DPLPSYGRG E GGR+ SL++G L +V+ITG NG IDG G WW+L+ + +L
Sbjct: 123 HWEVVDPLPSYGRGVEVPGGRYQSLVNGYMLHDVVITGNNGIIDGMGLGWWELFSSHSLN 182
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
++R HL+EL+ SN +++SNLTF N+P ++IHPVYC NV I ++I AP +P T GI PD
Sbjct: 183 YSRPHLIELVASNRVVVSNLTFLNAPAYSIHPVYCSNVHIHNVSISAPQESPYTIGIVPD 242
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SS +VCIEDC I +G D +++KSGWD YGIA RP+ N+ +RRV + S + GS+M
Sbjct: 243 SSDHVCIEDCVIATGYDAISLKSGWDEYGIAYGRPTENVHIRRVHLQAYSGSTIAFGSDM 302
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI N+ V+ +H++++ +G+ +T +GRGGY++ I I +I+ME + + + HP
Sbjct: 303 SGGISNILVENVHLYNSKSGIEFRTMRGRGGYMKEIIISDIEMENIYTAMAATGYCGSHP 362
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL-LGLAPSAKWQ 301
D+ +DP ALP + I +++ N T A AG+ + F IC+ NV+L + S W+
Sbjct: 363 DDKFDPNALPLLDHIILQDMIGTNITIAGSFAGLQESPFTNICLSNVTLSINSVSSIPWE 422
Query: 302 CQFVSGFTSQVFPLPCPQLQNKS 324
C VSGF+ V P PCP L+ S
Sbjct: 423 CSNVSGFSDSVLPKPCPDLETLS 445
>gi|116831111|gb|ABK28510.1| unknown [Arabidopsis thaliana]
Length = 478
Score = 308 bits (788), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 150/332 (45%), Positives = 218/332 (65%), Gaps = 4/332 (1%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
E+P++ PLPSYG+GR+ G SLI G +LT+V+ITG NGTI+GQG+ WW + + K
Sbjct: 129 EYPVVAPLPSYGQGRDAAGPTFASLISGTNLTDVVITGNNGTINGQGKYWWVKYRSGGFK 188
Query: 63 H-TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDP 121
TR + +E++ S N+ ISN+T +SP W IHPVYC NV++KG+TILAP+++PNTDGI+P
Sbjct: 189 GITRPYTIEIIFSQNVQISNITIIDSPAWNIHPVYCNNVIVKGVTILAPIDSPNTDGINP 248
Query: 122 DSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSE 181
DS TN IEDCY+ SGDD +AVKSGWD +GI + P+ + +RR++ +P +G+ +GSE
Sbjct: 249 DSCTNTLIEDCYVVSGDDCIAVKSGWDQFGIKVGMPTQQLSIRRLTCISPDSAGIALGSE 308
Query: 182 MSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDH 241
MSGGI +V ++ + + + +RIKT GRGGY+++I R M+ +K +S N H
Sbjct: 309 MSGGIKDVRIEDITLLQTQSAIRIKTAVGRGGYVKDIFARRFTMKTMKYVFWMSGAYNQH 368
Query: 242 PDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAK-- 299
P G+DPKA+P I I++ ++ + N T+ L G F +ICM N+ + A K
Sbjct: 369 PASGFDPKAMPVITNINYRDMTADNVTQPARLDGFKNDPFTKICMSNIKIDLAAEPKKLL 428
Query: 300 WQCQFVSGFTSQVFPLPCPQLQNKSSSW-CSF 330
W C +SG +S+V P PC L K + C+F
Sbjct: 429 WNCTSISGVSSKVTPKPCSLLPEKGAPVDCAF 460
>gi|42569272|ref|NP_179968.2| Pectin lyase-like protein [Arabidopsis thaliana]
gi|91806252|gb|ABE65854.1| glycoside hydrolase family 28 protein/polygalacturonase family
protein [Arabidopsis thaliana]
gi|330252406|gb|AEC07500.1| Pectin lyase-like protein [Arabidopsis thaliana]
Length = 477
Score = 308 bits (788), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 150/332 (45%), Positives = 218/332 (65%), Gaps = 4/332 (1%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
E+P++ PLPSYG+GR+ G SLI G +LT+V+ITG NGTI+GQG+ WW + + K
Sbjct: 129 EYPVVAPLPSYGQGRDAAGPTFASLISGTNLTDVVITGNNGTINGQGKYWWVKYRSGGFK 188
Query: 63 H-TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDP 121
TR + +E++ S N+ ISN+T +SP W IHPVYC NV++KG+TILAP+++PNTDGI+P
Sbjct: 189 GITRPYTIEIIFSQNVQISNITIIDSPAWNIHPVYCNNVIVKGVTILAPIDSPNTDGINP 248
Query: 122 DSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSE 181
DS TN IEDCY+ SGDD +AVKSGWD +GI + P+ + +RR++ +P +G+ +GSE
Sbjct: 249 DSCTNTLIEDCYVVSGDDCIAVKSGWDQFGIKVGMPTQQLSIRRLTCISPDSAGIALGSE 308
Query: 182 MSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDH 241
MSGGI +V ++ + + + +RIKT GRGGY+++I R M+ +K +S N H
Sbjct: 309 MSGGIKDVRIEDITLLQTQSAIRIKTAVGRGGYVKDIFARRFTMKTMKYVFWMSGAYNQH 368
Query: 242 PDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAK-- 299
P G+DPKA+P I I++ ++ + N T+ L G F +ICM N+ + A K
Sbjct: 369 PASGFDPKAMPVITNINYRDMTADNVTQPARLDGFKNDPFTKICMSNIKIDLAAEPKKLL 428
Query: 300 WQCQFVSGFTSQVFPLPCPQLQNKSSSW-CSF 330
W C +SG +S+V P PC L K + C+F
Sbjct: 429 WNCTSISGVSSKVTPKPCSLLPEKGAPVDCAF 460
>gi|3738338|gb|AAC63679.1| putative polygalacturonase [Arabidopsis thaliana]
Length = 466
Score = 308 bits (788), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 150/332 (45%), Positives = 218/332 (65%), Gaps = 4/332 (1%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
E+P++ PLPSYG+GR+ G SLI G +LT+V+ITG NGTI+GQG+ WW + + K
Sbjct: 118 EYPVVAPLPSYGQGRDAAGPTFASLISGTNLTDVVITGNNGTINGQGKYWWVKYRSGGFK 177
Query: 63 H-TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDP 121
TR + +E++ S N+ ISN+T +SP W IHPVYC NV++KG+TILAP+++PNTDGI+P
Sbjct: 178 GITRPYTIEIIFSQNVQISNITIIDSPAWNIHPVYCNNVIVKGVTILAPIDSPNTDGINP 237
Query: 122 DSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSE 181
DS TN IEDCY+ SGDD +AVKSGWD +GI + P+ + +RR++ +P +G+ +GSE
Sbjct: 238 DSCTNTLIEDCYVVSGDDCIAVKSGWDQFGIKVGMPTQQLSIRRLTCISPDSAGIALGSE 297
Query: 182 MSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDH 241
MSGGI +V ++ + + + +RIKT GRGGY+++I R M+ +K +S N H
Sbjct: 298 MSGGIKDVRIEDITLLQTQSAIRIKTAVGRGGYVKDIFARRFTMKTMKYVFWMSGAYNQH 357
Query: 242 PDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAK-- 299
P G+DPKA+P I I++ ++ + N T+ L G F +ICM N+ + A K
Sbjct: 358 PASGFDPKAMPVITNINYRDMTADNVTQPARLDGFKNDPFTKICMSNIKIDLAAEPKKLL 417
Query: 300 WQCQFVSGFTSQVFPLPCPQLQNKSSSW-CSF 330
W C +SG +S+V P PC L K + C+F
Sbjct: 418 WNCTSISGVSSKVTPKPCSLLPEKGAPVDCAF 449
>gi|255551873|ref|XP_002516982.1| Polygalacturonase, putative [Ricinus communis]
gi|223544070|gb|EEF45596.1| Polygalacturonase, putative [Ricinus communis]
Length = 454
Score = 308 bits (788), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 148/329 (44%), Positives = 222/329 (67%), Gaps = 4/329 (1%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
+ +I+PLPSYGRG E GGR+ SLI+G L +V+ITG NGTIDGQG +WWD + + +L
Sbjct: 112 HYDLIEPLPSYGRGIELPGGRYRSLINGYKLRDVVITGDNGTIDGQGSVWWDWFNSHSLN 171
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
++R HLVE + S I++SNLTF N+P + IHPVYC NV+++ M++ AP +P T GI PD
Sbjct: 172 YSRPHLVEFIESERIVVSNLTFLNAPAYNIHPVYCSNVLVQNMSLSAPPESPQTIGIVPD 231
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SS NVCIE+ I+ G D +++KSGWD YGIA R + ++ +RRV + + S + GSEM
Sbjct: 232 SSNNVCIEESIIKMGYDAISLKSGWDEYGIAYDRATRDVHIRRVHLQSSSGSSIAFGSEM 291
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI NV V+Q+H++++ +G+ +T KGRGGYI+ I I ++++E + + + HP
Sbjct: 292 SGGISNVHVEQVHLYNSFSGIGFRTTKGRGGYIKRIFISDVELENINLALGAIGDHGLHP 351
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQC 302
D+ +DPKA+P + I+ N+ N + A GI + F +C+ N++L+ ++ S W C
Sbjct: 352 DDKFDPKAVPVVDQITLQNLTGTNISTAGNFTGIQDSPFTSLCLFNITLM-VSSSNSWTC 410
Query: 303 QFVSGFTSQVFPLPCPQLQ---NKSSSWC 328
V G++ VFP+PCP+L+ + SSS C
Sbjct: 411 SNVIGYSDSVFPVPCPELKSPYSNSSSAC 439
>gi|168021522|ref|XP_001763290.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685425|gb|EDQ71820.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 449
Score = 306 bits (784), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 155/326 (47%), Positives = 212/326 (65%), Gaps = 4/326 (1%)
Query: 4 WPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKH 63
WPI+ LPSYGRGRE G R+ SLIHG H+ + ++TG+NG+IDGQG WW+ + L++
Sbjct: 111 WPILPALPSYGRGRELPGLRYSSLIHGQHVEDFVLTGHNGSIDGQGGWWWEQHKQKRLRY 170
Query: 64 TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDS 123
TRG LVELM S NI+IS++T +NSPFW +HP C NV I G+TILAPL+APNTDGIDPDS
Sbjct: 171 TRGRLVELMWSTNIVISDVTLQNSPFWHLHPYDCTNVTISGVTILAPLDAPNTDGIDPDS 230
Query: 124 STNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMS 183
NV +E+CYI GDD VAVKSGWD YGI RP N+ +R V + +G+ IGSEMS
Sbjct: 231 CKNVLVENCYISVGDDAVAVKSGWDKYGIEYNRPCVNVTIRNVIARSQISAGISIGSEMS 290
Query: 184 GGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPD 243
GG+ V V+ +++W + G+RIKT GRGGY++NI +N+ + V++ I + +HPD
Sbjct: 291 GGVEQVLVEDVYIWGSRRGIRIKTSPGRGGYVKNILYKNLTLIDVRVGIVVKTDYGEHPD 350
Query: 244 EGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAK--WQ 301
+DPKALP + ISF V + + G I ++N++ +GL + +
Sbjct: 351 LDFDPKALPVVANISFDGVYGSSVRYPVRMFGSKEVPITGIDIRNMN-VGLTRKKRNVFT 409
Query: 302 CQFVSG-FTSQVFPLPCPQLQNKSSS 326
C F+ G +VFP PC L + +S
Sbjct: 410 CDFLQGRVVGKVFPSPCKALIREEAS 435
>gi|413916538|gb|AFW56470.1| polygalacturonase [Zea mays]
Length = 458
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 151/334 (45%), Positives = 215/334 (64%), Gaps = 5/334 (1%)
Query: 1 MDEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRT 60
+ +WP+++PLPSYGRG + G RH SLI+G +L +V+ITG NGTIDGQG WW+ + +
Sbjct: 112 VSQWPVVEPLPSYGRGMDLPGSRHRSLINGQNLVDVVITGNNGTIDGQGSTWWNWFRSNK 171
Query: 61 LKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGID 120
L ++R HLVE ++S I+ISN+TF NSP W+IHPVYC NVV+ +TI L+AP GI
Sbjct: 172 LNYSRPHLVEFVDSEQIVISNITFLNSPAWSIHPVYCSNVVVHSVTIQTSLDAPLNHGIV 231
Query: 121 PDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGS 180
PDS +N+CIED I D +++KSGWD GIA RP+S+I + R+ + + + GS
Sbjct: 232 PDSCSNMCIEDSSISVSHDAISLKSGWDKQGIAFGRPTSDIHISRLDLQSSLGAALAFGS 291
Query: 181 EMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSND 240
EMSGGI ++ D+L + ++ GV KT GRGGYI + I +++ME V + I +
Sbjct: 292 EMSGGISDIHADRLLIHSSSRGVFFKTAPGRGGYIRDTVISDVQMEDVDVAIAFTGDWPS 351
Query: 241 HPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLL---GLAPS 297
HPD+ +DP ALP + I+ N+ + A VL+GI G F +IC+ N++ +P+
Sbjct: 352 HPDDQFDPAALPVVSHITLKNMTGTRISVAGVLSGIAGDPFTDICLSNINFSLADSASPT 411
Query: 298 AKWQCQFVSGFTSQVFPLPCPQLQNKSS--SWCS 329
+ W C VSG++ VFP PC LQ +SS S CS
Sbjct: 412 SHWSCSNVSGYSELVFPEPCLDLQTQSSDASVCS 445
>gi|326517826|dbj|BAK03831.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520253|dbj|BAK07385.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 495
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 160/322 (49%), Positives = 216/322 (67%), Gaps = 7/322 (2%)
Query: 4 WPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKH 63
WP++ LPSYG GRER G R SLIHG +L +V+ITGYNG+I+GQG++WW R LK+
Sbjct: 151 WPLMPALPSYGYGRERKGPRFGSLIHGQNLKDVVITGYNGSINGQGEVWWLKHRRRMLKN 210
Query: 64 TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLN-APNTDGIDPD 122
TR LV+LM S +I+++N+T RNSPFW HP C NV + +TIL+P++ APNTDGIDPD
Sbjct: 211 TRPPLVQLMWSKDIVVTNITLRNSPFWHFHPYDCTNVTVSNVTILSPISGAPNTDGIDPD 270
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S +V IE+CYI GDD +A+KSGWD YGIA R SSNI++R V+ + +G+ IGSEM
Sbjct: 271 SCEDVLIENCYISVGDDAIAIKSGWDQYGIAYGRSSSNILIRNVTVRSLVSAGISIGSEM 330
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGG+ N+TV+ +H+WD+ GVRIKT GRGGYI NI+ NI + V+ I I N+H
Sbjct: 331 SGGVANITVENVHIWDSRRGVRIKTAIGRGGYIRNISYSNITFDNVRAGIVIKVDYNEHA 390
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLA-GIIGTQFEEICMKNVSLLGLAPSAK-- 299
D+G+D A P I GISF + + PV A G ++I +++S +G++ K
Sbjct: 391 DDGYDRNAFPDITGISFKKIHG-RGVRVPVRAHGSNYIPIKDITFQDMS-VGISYKKKHI 448
Query: 300 WQCQFVSG-FTSQVFPLPCPQL 320
+QC ++ G VFP PC L
Sbjct: 449 FQCSYIEGRVIGSVFPKPCENL 470
>gi|242063272|ref|XP_002452925.1| hypothetical protein SORBIDRAFT_04g035020 [Sorghum bicolor]
gi|241932756|gb|EES05901.1| hypothetical protein SORBIDRAFT_04g035020 [Sorghum bicolor]
Length = 500
Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 161/322 (50%), Positives = 216/322 (67%), Gaps = 7/322 (2%)
Query: 4 WPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKH 63
WP++ LPSYG GRER G R SLIHG +L +V+ITG+NG+I+GQG++WW R L +
Sbjct: 156 WPLMPALPSYGYGRERKGPRFGSLIHGQNLKDVVITGHNGSINGQGEVWWMKHRRRILNN 215
Query: 64 TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLN-APNTDGIDPD 122
TR LV+LM S +I+I+N+T RNSPFW +HP C NV + +TIL+P++ APNTDGIDPD
Sbjct: 216 TRPPLVQLMWSKDIIIANITLRNSPFWHLHPYDCTNVTVSNVTILSPVSGAPNTDGIDPD 275
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SS +V IE+CYI GDD +A+KSGWD YGIA RPSSNI +R V+ + +G+ IGSEM
Sbjct: 276 SSQDVLIENCYISVGDDAIAIKSGWDQYGIAYGRPSSNISIRNVNARSLVSAGISIGSEM 335
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGG+ NVTV+ + +W++ GVRIKT GRGGYI NI+ RNI + V+ I I N+H
Sbjct: 336 SGGVANVTVENVRIWESRRGVRIKTATGRGGYIRNISYRNITFDNVRAGIVIKVDYNEHA 395
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLA-GIIGTQFEEICMKNVSLLGLAPSAK-- 299
D+G+D A P I ISF + + PV A G +I +++S +G++ K
Sbjct: 396 DDGYDRTAFPDITSISFKGIHG-RGVRVPVRAHGSDVIPIRDISFQDMS-VGISYKKKHI 453
Query: 300 WQCQFVSGFTSQ-VFPLPCPQL 320
+QC +V G + VFP PC L
Sbjct: 454 FQCSYVEGRVVRPVFPKPCENL 475
>gi|226507254|ref|NP_001148987.1| polygalacturonase precursor [Zea mays]
gi|195623798|gb|ACG33729.1| polygalacturonase [Zea mays]
Length = 458
Score = 304 bits (779), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 152/334 (45%), Positives = 214/334 (64%), Gaps = 5/334 (1%)
Query: 1 MDEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRT 60
+ +WP+++PLPSYGRG + G RH SLI+G +L +V+ITG NGTIDGQG WW+ + +
Sbjct: 112 VSQWPVVEPLPSYGRGMDLPGSRHRSLINGQNLIDVVITGNNGTIDGQGSTWWNWFRSNK 171
Query: 61 LKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGID 120
L ++R HLVE ++S I+ISN+TF NSP W+IHPVYC NVV+ +TI L+AP GI
Sbjct: 172 LNYSRPHLVEFVDSEQIVISNITFLNSPAWSIHPVYCSNVVVHSVTIQTSLDAPLNHGIV 231
Query: 121 PDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGS 180
PDS +N+CIED I D +++KSGWD GIA RP+S+I + R+ + + + GS
Sbjct: 232 PDSCSNMCIEDSSISVSHDAISLKSGWDKQGIAFGRPTSDIHISRLDLQSSLGAALTFGS 291
Query: 181 EMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSND 240
EMSGGI +V D+L + + GV KT GRGGYI + I +++ME V + I +
Sbjct: 292 EMSGGISDVHADRLLIHSSFRGVFFKTAPGRGGYIRDTVISDVQMEDVDVAIAFTGDWPS 351
Query: 241 HPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLL---GLAPS 297
HPD+ +DP ALP + I+ N+ + A VL+GI G F +IC+ N++ +P+
Sbjct: 352 HPDDQFDPTALPVVSHITLKNMTGTRISVAGVLSGIAGDPFTDICLSNINFSLADSASPT 411
Query: 298 AKWQCQFVSGFTSQVFPLPCPQLQNKSS--SWCS 329
+ W C VSG++ VFP PC LQ +SS S CS
Sbjct: 412 SHWSCSNVSGYSELVFPEPCLDLQTQSSDASICS 445
>gi|212274809|ref|NP_001130359.1| uncharacterized protein LOC100191454 precursor [Zea mays]
gi|194688932|gb|ACF78550.1| unknown [Zea mays]
gi|413920257|gb|AFW60189.1| hypothetical protein ZEAMMB73_155387 [Zea mays]
Length = 458
Score = 303 bits (777), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 148/323 (45%), Positives = 212/323 (65%), Gaps = 4/323 (1%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
+W I++PLPSYG+G + G RH SLI G +LT+V+ITG NG IDGQG +WW + L
Sbjct: 117 QWLIVEPLPSYGQGLDLPGPRHQSLISGYNLTDVVITGNNGVIDGQGLVWWQWLRSHELN 176
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
H+R +L+E + S +I+ISNLTF NSP W+IHPVYC NV + +TI L+AP TDGI PD
Sbjct: 177 HSRPNLLEFLYSEDIVISNLTFLNSPAWSIHPVYCSNVKVHNVTIKTSLDAPLTDGIVPD 236
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S +N+CIED I + +++KSGWD YGI+ RP+S+I + RV + + + + GSEM
Sbjct: 237 SCSNLCIEDSTISVSHEAISLKSGWDRYGISFGRPTSDIRISRVDLLSSSGAALAFGSEM 296
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI ++ V+ L + D++ G+ KT GRGGYIE++ I ++ME V + I + + HP
Sbjct: 297 SGGISDIHVNHLRIHDSSKGISFKTSPGRGGYIEDVVISEVQMENVHVGIEFTGNCSTHP 356
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL---LGLAPSAK 299
D+ +DP LP I ++ N+ N + A VL+GI G F IC+ N++ G PS+
Sbjct: 357 DDSFDPSDLPAIDHVTMKNMAGTNISVAGVLSGIEGAPFTAICLSNLNFSMAAGSGPSS- 415
Query: 300 WQCQFVSGFTSQVFPLPCPQLQN 322
W C VSG++ VFP PC +L++
Sbjct: 416 WSCSDVSGYSEAVFPEPCTELRD 438
>gi|357443839|ref|XP_003592197.1| Endo-polygalacturonase-like protein [Medicago truncatula]
gi|355481245|gb|AES62448.1| Endo-polygalacturonase-like protein [Medicago truncatula]
Length = 475
Score = 303 bits (777), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 152/323 (47%), Positives = 209/323 (64%), Gaps = 2/323 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
EWP + LPSYGR ++ GR SLI G +LT+V+ITG NGTIDGQG WWD + + LK
Sbjct: 128 EWPKLSFLPSYGREKDAPDGRFSSLIFGTNLTDVVITGNNGTIDGQGSTWWDKFQKKQLK 187
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
TR +++E+M S+ I ISNLT NSP W +HP+Y N++I +TILAP++ PNTDGIDPD
Sbjct: 188 ITRPYMIEIMYSDQIQISNLTLINSPNWFVHPIYSSNIIINRLTILAPVDVPNTDGIDPD 247
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S TNV IED YI SGDD +A+KSG D YGI + +PS IIVRR++ +P + V +GSEM
Sbjct: 248 SCTNVLIEDNYIVSGDDCIAIKSGLDGYGIKVGKPSQKIIVRRLTCISPKSAMVALGSEM 307
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI ++ ++ + + + VRIKT GRG Y+++I ++ + + +K ++ H
Sbjct: 308 SGGIQDIRIEDITAINTESAVRIKTAVGRGAYVKDIFVKGMNLNTMKYVFWMTGAYKSHA 367
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAK--W 300
+ G+DPKALPKI GI++ ++++ N T A L GI F IC+ NV++ A W
Sbjct: 368 ENGFDPKALPKISGINYRDIIAKNVTIAGQLDGISNDPFTGICISNVTIEMSAQKNNLPW 427
Query: 301 QCQFVSGFTSQVFPLPCPQLQNK 323
C VSG S P PC L K
Sbjct: 428 NCTDVSGVASNAVPKPCDMLPEK 450
>gi|226492991|ref|NP_001140630.1| uncharacterized protein LOC100272705 [Zea mays]
gi|194700250|gb|ACF84209.1| unknown [Zea mays]
gi|413924334|gb|AFW64266.1| hypothetical protein ZEAMMB73_686606 [Zea mays]
Length = 495
Score = 300 bits (769), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 156/322 (48%), Positives = 217/322 (67%), Gaps = 7/322 (2%)
Query: 4 WPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKH 63
WP++ LPSYG GRER G R SLIHG +L +V+ITG+NG+I+GQG++WW R L +
Sbjct: 151 WPLMPALPSYGYGRERKGPRFGSLIHGQNLRDVVITGHNGSINGQGEVWWMKHRRRILNN 210
Query: 64 TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLN-APNTDGIDPD 122
TR LV+LM S +I+++N+T RNSPFW +HP C NV + +TI++P++ APNTDGIDPD
Sbjct: 211 TRPPLVQLMWSKDIIVANITLRNSPFWHLHPYDCTNVTVSNVTIMSPVSGAPNTDGIDPD 270
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S +V IE+CYI GDD +A+KSGWD YGIA RPSS+I++R V+ + +G+ IGSEM
Sbjct: 271 SCQDVLIENCYISVGDDAIAIKSGWDQYGIAYGRPSSDILIRNVTARSLVSAGISIGSEM 330
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGG+ NVTV+ + +W++ GVRIKT GRGGYI NI+ RNI + V+ I I N+H
Sbjct: 331 SGGVANVTVENVRIWESRRGVRIKTATGRGGYIRNISYRNITFDNVRAGIVIKVDYNEHA 390
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLA-GIIGTQFEEICMKNVSLLGLAPSAK-- 299
D+G+D A P I ISF + + PV A G ++I +++S +G++ K
Sbjct: 391 DDGYDRTAFPDITSISFKGIHG-QGVRVPVRAHGSDVIPIKDISFQDMS-VGISYKKKHI 448
Query: 300 WQCQFVSGFTSQ-VFPLPCPQL 320
+QC ++ G + VFP PC L
Sbjct: 449 FQCSYLEGRVIRPVFPKPCENL 470
>gi|125541363|gb|EAY87758.1| hypothetical protein OsI_09176 [Oryza sativa Indica Group]
Length = 545
Score = 300 bits (769), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 156/322 (48%), Positives = 213/322 (66%), Gaps = 7/322 (2%)
Query: 4 WPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKH 63
WP++ LPSYG GRER G R SLIHG +L +V+ITG+NG+I+GQG++WW R L +
Sbjct: 174 WPLMPALPSYGYGRERKGPRFGSLIHGQNLKDVVITGHNGSINGQGEVWWMKHRRRILNN 233
Query: 64 TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLN-APNTDGIDPD 122
TR L++LM S +I+++N+T +NSPFW HP C N+ + +TILAP++ APNTDGIDPD
Sbjct: 234 TRPPLLQLMWSKDIIVANITLKNSPFWHFHPYDCTNITVSNVTILAPISSAPNTDGIDPD 293
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S +V IE+CYI GDD +AVKSGWD YGIA RPS NI++R V + +G+ IGSEM
Sbjct: 294 SCQDVLIENCYISVGDDAIAVKSGWDQYGIAYGRPSRNIVIRNVMARSLVSAGISIGSEM 353
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI NVTV+ + +W++ G+RIKT GRGGYI +I+ RNI + V+ I I N+H
Sbjct: 354 SGGIANVTVEDVRIWESRRGLRIKTAIGRGGYIHDISYRNITFDNVRAGIVIKVDYNEHA 413
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLA-GIIGTQFEEICMKNVSLLGLAPSAK-- 299
D+G+D A P I ISF + + PV A G ++I +++S +G++ K
Sbjct: 414 DDGYDRDAFPDITNISFKEIHG-RGVRVPVRAHGSSDIPIKDISFQDMS-IGISYKKKHI 471
Query: 300 WQCQFVSG-FTSQVFPLPCPQL 320
+QC F+ G VFP PC L
Sbjct: 472 FQCSFIEGRVIGSVFPKPCENL 493
>gi|297818750|ref|XP_002877258.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297323096|gb|EFH53517.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 487
Score = 300 bits (769), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 151/325 (46%), Positives = 215/325 (66%), Gaps = 13/325 (4%)
Query: 4 WPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKH 63
WP++ PLPSYG GRE G R+ S IHG +L +V++TG NG+I+GQGQ WW + + L H
Sbjct: 143 WPLLPPLPSYGYGREHHGPRYGSFIHGQNLRDVVVTGNNGSINGQGQTWWKKYRQKLLNH 202
Query: 64 TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAP-LNAPNTDGIDPD 122
TRG LV++M S++I+ +N+T R+SPFWT+HP C+NV I MTILAP APNTDGIDPD
Sbjct: 203 TRGPLVQIMWSSDIVFANITLRDSPFWTLHPYDCKNVTITNMTILAPVFEAPNTDGIDPD 262
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S ++ IE+ YI GDD +A+KSGWD YG RPS NI++R + + +G+ IGSEM
Sbjct: 263 SCEDMLIENSYISVGDDGIAIKSGWDQYGTTYGRPSKNILIRNLIIRSMVSAGISIGSEM 322
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGG+ N+TV+ + +W + GVRIKT GRGGY+ +IT RN+ ++ +++ I I N+HP
Sbjct: 323 SGGVSNITVENILIWSSRRGVRIKTAPGRGGYVRDITFRNVTLDELRVGIVIKTDYNEHP 382
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL----LGLAPSA 298
D G++P+A P + I++ + + PV I G++ EI +KNV+ +G+
Sbjct: 383 DGGFNPQAFPILENINYTGIYG-QGVRVPVR--IQGSK--EIPVKNVTFRDMSVGITYKK 437
Query: 299 K--WQCQFVSG-FTSQVFPLPCPQL 320
K +QC +V G +FP PC L
Sbjct: 438 KHIFQCAYVEGRVIGTIFPAPCENL 462
>gi|125583899|gb|EAZ24830.1| hypothetical protein OsJ_08610 [Oryza sativa Japonica Group]
Length = 489
Score = 300 bits (768), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 156/322 (48%), Positives = 213/322 (66%), Gaps = 7/322 (2%)
Query: 4 WPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKH 63
WP++ LPSYG GRER G R SLIHG +L +V+ITG+NG+I+GQG++WW R L +
Sbjct: 118 WPLMPALPSYGYGRERKGPRFGSLIHGQNLKDVVITGHNGSINGQGEVWWMKHRRRILNN 177
Query: 64 TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLN-APNTDGIDPD 122
TR L++LM S +I+++N+T +NSPFW HP C N+ + +TILAP++ APNTDGIDPD
Sbjct: 178 TRPPLLQLMWSKDIIVANITLKNSPFWHFHPYDCTNITVSNVTILAPISSAPNTDGIDPD 237
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S +V IE+CYI GDD +AVKSGWD YGIA RPS NI++R V + +G+ IGSEM
Sbjct: 238 SCQDVLIENCYISVGDDAIAVKSGWDQYGIAYGRPSRNIVIRNVMARSLVSAGISIGSEM 297
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI NVTV+ + +W++ G+RIKT GRGGYI +I+ RNI + V+ I I N+H
Sbjct: 298 SGGIANVTVEDVRIWESRRGLRIKTAIGRGGYIRDISYRNITFDNVRAGIVIKVDYNEHA 357
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLA-GIIGTQFEEICMKNVSLLGLAPSAK-- 299
D+G+D A P I ISF + + PV A G ++I +++S +G++ K
Sbjct: 358 DDGYDRDAFPDITNISFKEIHG-RGVRVPVRAHGSSDIPIKDISFQDMS-IGISYKKKHI 415
Query: 300 WQCQFVSG-FTSQVFPLPCPQL 320
+QC F+ G VFP PC L
Sbjct: 416 FQCSFIEGRVIGSVFPKPCENL 437
>gi|356570982|ref|XP_003553661.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 527
Score = 299 bits (765), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 146/326 (44%), Positives = 213/326 (65%), Gaps = 5/326 (1%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
W I+D LPSYGRG GR+ SLI+G +L++V+ITG NGTIDGQG +WW L+ + +L
Sbjct: 180 HWDIVDFLPSYGRGI----GRYRSLIYGQNLSDVVITGDNGTIDGQGSIWWKLFNSNSLN 235
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+TR +L+E ++S +++ISNLTF +SP W IHPVYC NV I+ +T AP P T GI PD
Sbjct: 236 YTRPNLIEFVDSVDVIISNLTFLDSPAWGIHPVYCSNVQIQNITYRAPAEFPYTSGIVPD 295
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SS NVCIE+ I +G D + +KSGWD YGIA +P+SN+ + V + + +G+ GSEM
Sbjct: 296 SSQNVCIENSNISTGHDAIVLKSGWDQYGIAYGKPTSNVHISNVYLQSSSGAGLAFGSEM 355
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI + ++LH+ ++ G+ +KT +GRGGY+ I I + ++E + + I ++ S HP
Sbjct: 356 SGGISVIIAEKLHILNSPIGIELKTTRGRGGYMRGIFISDAELENISLGISMTGYSGFHP 415
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL-LGLAPSAKWQ 301
D+ +D +LP + I+F NV+ N + A +GI+ + F IC+ NV+ L PS W
Sbjct: 416 DDKYDTSSLPVVGDITFKNVIGANISVAGNFSGIVESPFSTICLSNVTFSLSSEPSPSWF 475
Query: 302 CQFVSGFTSQVFPLPCPQLQNKSSSW 327
C V GF+ V P PCP +Q+ S +
Sbjct: 476 CSNVIGFSEHVIPEPCPDIQSSYSKF 501
>gi|125571200|gb|EAZ12715.1| hypothetical protein OsJ_02632 [Oryza sativa Japonica Group]
Length = 419
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 153/330 (46%), Positives = 216/330 (65%), Gaps = 28/330 (8%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
WP+I+PLPSYGRGRE GGR++SLIHG+ L +V+ITG NGTIDGQG WWD+W TL
Sbjct: 116 SWPLIEPLPSYGRGRELPGGRYMSLIHGNGLQDVVITGDNGTIDGQGSAWWDMWKKGTLP 175
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
TR HL+ELMNS+++++SN+ F++SPFW IHPVYC
Sbjct: 176 FTRPHLLELMNSSDVVVSNVVFQDSPFWNIHPVYC------------------------- 210
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S+NVCIEDCYI +GDDL+A+KSGWD YG+A RPSS+I +RR++G++P +G +GSE
Sbjct: 211 -SSNVCIEDCYISTGDDLIAIKSGWDEYGMAYGRPSSHITIRRITGSSP-FAGFAVGSET 268
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGG+ +V + L+ + + G+ IKT+ GRGG+I N+T+ ++ ++ V+ +RI+ HP
Sbjct: 269 SGGVEHVLAEHLNFFSSGFGIHIKTNTGRGGFIRNVTVSDVTLDSVRYGLRIAGDVGGHP 328
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQC 302
D+ +D ALP + G++ NV N +A + GI + F IC+ NV L G A W+C
Sbjct: 329 DDRYDRNALPVVDGLTIKNVQGQNIREAGSIKGIATSAFSRICLSNVKLNGGAAVRPWKC 388
Query: 303 QFVSGFTSQVFPLPCPQLQNKSS-SWCSFS 331
+ VSG V P PC +L + S S+C+ S
Sbjct: 389 EAVSGAALDVQPSPCTELTSTSGMSFCTNS 418
>gi|15229188|ref|NP_189881.1| Pectin lyase-like protein [Arabidopsis thaliana]
gi|7529266|emb|CAB86682.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|15215709|gb|AAK91400.1| AT3g42950/F18P9_110 [Arabidopsis thaliana]
gi|332644239|gb|AEE77760.1| Pectin lyase-like protein [Arabidopsis thaliana]
Length = 484
Score = 296 bits (759), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 149/325 (45%), Positives = 214/325 (65%), Gaps = 13/325 (4%)
Query: 4 WPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKH 63
W ++ PLPSYG GRE G R+ S IHG +L +V++TG NG+I+GQGQ WW + + L H
Sbjct: 140 WSLLPPLPSYGYGREHHGPRYGSFIHGQNLRDVVVTGNNGSINGQGQTWWKKYRQKLLNH 199
Query: 64 TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAP-LNAPNTDGIDPD 122
TRG LV++M S++I+ +N+T R+SPFWT+HP C+NV I MTILAP APNTDGIDPD
Sbjct: 200 TRGPLVQIMWSSDIVFANITLRDSPFWTLHPYDCKNVTITNMTILAPVFEAPNTDGIDPD 259
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S ++ IE+ YI GDD +A+KSGWD YG +PS NI++R + + +G+ IGSEM
Sbjct: 260 SCEDMLIENSYISVGDDGIAIKSGWDQYGTTYGKPSKNILIRNLIIRSMVSAGISIGSEM 319
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGG+ N+TV+ + +W + GVRIKT GRGGY+ +IT RN+ ++ +++ I I N+HP
Sbjct: 320 SGGVSNITVENILIWSSRRGVRIKTAPGRGGYVRDITFRNVTLDELRVGIVIKTDYNEHP 379
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL----LGLAPSA 298
D G++P+A P + I++ + + PV I G++ EI +KNV+ +G+
Sbjct: 380 DGGFNPQAFPILENINYTGIYG-QGVRVPVR--IQGSK--EIPVKNVTFRDMSVGITYKK 434
Query: 299 K--WQCQFVSG-FTSQVFPLPCPQL 320
K +QC +V G +FP PC L
Sbjct: 435 KHIFQCAYVEGRVIGTIFPAPCDNL 459
>gi|108862809|gb|ABA99544.2| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|222617271|gb|EEE53403.1| hypothetical protein OsJ_36464 [Oryza sativa Japonica Group]
Length = 457
Score = 296 bits (758), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 151/324 (46%), Positives = 215/324 (66%), Gaps = 2/324 (0%)
Query: 1 MDEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRT 60
+ EWPI++PLPSYG+G + G RH SLI+G ++T+V+ITG NG IDGQG WW+ + +
Sbjct: 114 VSEWPIVEPLPSYGQGIDLPGARHRSLINGHNVTDVVITGNNGIIDGQGLTWWNWFRSNK 173
Query: 61 LKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGID 120
L ++R HLVE ++S +I+ISNLT NSP W IHPV+C NV++ +TI L+AP TDGI
Sbjct: 174 LNYSRPHLVEFVDSEDIVISNLTLLNSPAWGIHPVFCSNVMVHDVTIRTSLDAPLTDGIV 233
Query: 121 PDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGS 180
PDS +N+CIED I D +++KSGWD+YGI + RP+S+I + RV + + GS
Sbjct: 234 PDSCSNMCIEDSSISVAHDAISLKSGWDNYGITIGRPASDIHISRVDLQASLGAALAFGS 293
Query: 181 EMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSND 240
EMSGGI ++ VD L++ ++ G+ KT GRGGYI ++ I +++ME V + I+ + +
Sbjct: 294 EMSGGISDIHVDHLNIHGSSRGILFKTAPGRGGYIRDVVISDVQMEDVNVAIKFTGDWST 353
Query: 241 HPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV--SLLGLAPSA 298
HPD +DP ALP I I+ N+V N + A VL+GI G F IC+ N+ SL S+
Sbjct: 354 HPDNHFDPSALPMINRITLKNMVGTNISVAGVLSGINGDPFTNICLSNISFSLADSTQSS 413
Query: 299 KWQCQFVSGFTSQVFPLPCPQLQN 322
W C +SG++ VFP PCP L +
Sbjct: 414 SWSCSNISGYSELVFPEPCPDLHH 437
>gi|224077474|ref|XP_002305262.1| predicted protein [Populus trichocarpa]
gi|222848226|gb|EEE85773.1| predicted protein [Populus trichocarpa]
Length = 437
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 154/335 (45%), Positives = 219/335 (65%), Gaps = 8/335 (2%)
Query: 2 DEWPIIDPLPSYGRGRER-LGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRT 60
DEWP++ PLPSYG RE + GR LI ++T+VIITG NGT+DGQG +WW+ + +
Sbjct: 86 DEWPLLTPLPSYGGVRENAVFGRPGGLIFASNVTDVIITGNNGTVDGQGAVWWEKFNEKK 145
Query: 61 LKH-TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGI 119
LK R +L+E+M S+ + ISN+T NSP W +HP+Y N+ I+G+TILAP++ PNTDGI
Sbjct: 146 LKKLERPYLIEIMYSDQVQISNITLINSPQWHVHPIYSSNLWIQGVTILAPVDVPNTDGI 205
Query: 120 DPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIG 179
+PDS TNV IEDCYI SGDD +AVKSG D YGI + P +++RR++ +P + + +G
Sbjct: 206 NPDSCTNVIIEDCYIVSGDDCIAVKSGLDQYGIKVGMPMKQLVIRRITCISPKSAAIALG 265
Query: 180 SEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSN 239
SEMSGGI +V ++ + + + VR+KT GRGGY+++I +R + ++ +K + +
Sbjct: 266 SEMSGGIEDVRIEDITAINTESAVRVKTAVGRGGYVKDIFVRRMTLKTMKYVFWMIGSYS 325
Query: 240 DHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGI-IGTQFEEICMKNVSLLGLAPSA 298
H DEG+DPKALP+I I+F ++ + N T L G+ G F IC+ NV++ LA
Sbjct: 326 SHADEGYDPKALPEITNINFRDIAADNVTIPGKLEGLGEGNPFTGICISNVTMT-LAEKH 384
Query: 299 K---WQCQFVSGFTSQVFPLPCPQLQNKSSSWCSF 330
K W C VSG +S V P+PC L KS C F
Sbjct: 385 KEPAWNCTDVSGVSSNVTPMPCAALPKKSMD-CPF 418
>gi|356503915|ref|XP_003520745.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 497
Score = 296 bits (757), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 146/320 (45%), Positives = 211/320 (65%), Gaps = 5/320 (1%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
W I+D LPSYGRG GR+ SLI+G +L++V+ITG NGTIDGQG +WW+L+ + +L
Sbjct: 135 HWDIVDFLPSYGRGI----GRYRSLIYGQNLSDVVITGDNGTIDGQGSIWWELFSSNSLN 190
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
++R +L+E ++S +I+ISNLTF +SP W IHPV+C NV I+ +T AP P T GI PD
Sbjct: 191 YSRPNLIEFVDSVDIIISNLTFLDSPAWGIHPVHCSNVQIQNITSRAPAEFPYTSGIVPD 250
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SS VCIE+ I +G D V +KSGWD YGIA +P+S++ + V + + +G+ GSEM
Sbjct: 251 SSRYVCIENSNISTGHDAVVLKSGWDQYGIAYGKPTSSVHISNVYLQSSSGAGLAFGSEM 310
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI ++ ++LH+ ++ G+ +KT KGRGGY+ I I + ++E + + I ++ S HP
Sbjct: 311 SGGISDIIAEKLHILNSPIGIELKTTKGRGGYMRGIFISDAELENISLGISMTGYSGFHP 370
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL-LGLAPSAKWQ 301
D+ +D ALP + I+F NV+ N + A +GI+ + F IC+ NV+ L PS W
Sbjct: 371 DDKYDTSALPIVGDITFKNVIGANISVAGNFSGIVESPFSTICLSNVTFSLSSEPSPSWF 430
Query: 302 CQFVSGFTSQVFPLPCPQLQ 321
C V GF+ V P PCP LQ
Sbjct: 431 CSNVIGFSEDVIPEPCPDLQ 450
>gi|242071887|ref|XP_002451220.1| hypothetical protein SORBIDRAFT_05g025980 [Sorghum bicolor]
gi|241937063|gb|EES10208.1| hypothetical protein SORBIDRAFT_05g025980 [Sorghum bicolor]
Length = 448
Score = 296 bits (757), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 150/326 (46%), Positives = 212/326 (65%), Gaps = 2/326 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
+WPI++PLPSYG+G + G RH SLI+G +LT+V+ITG NG IDGQG +WW + L
Sbjct: 107 QWPIVEPLPSYGQGTDLPGPRHRSLINGYNLTDVVITGNNGVIDGQGLVWWQWLLSHELN 166
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
H+R HL+E + S +I+ISNLTF NSP W+IHPVYC NV + +TI L+AP TDGI PD
Sbjct: 167 HSRPHLLEFLYSEDIVISNLTFLNSPAWSIHPVYCSNVKVHNVTIETSLDAPLTDGIVPD 226
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S +N+CIED I + +++KSGWD YGI+ RP+S+I + RV + + + + GSEM
Sbjct: 227 SCSNLCIEDSTISVSHEAISLKSGWDKYGISFGRPTSDIHISRVDLLSSSGAALAFGSEM 286
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI ++ V+ L + D+ G+ KT GRGGYIE + I ++ME V + I + + HP
Sbjct: 287 SGGISDIHVNHLRIHDSYKGISFKTSPGRGGYIEEVIISEVQMENVHVGIEFTGNCSTHP 346
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSA--KW 300
D+ +D LP I ++ N+V N + A VL+GI F IC+ N++ A + W
Sbjct: 347 DDSFDLSDLPTIDQVTMKNMVGTNISVAGVLSGIDNAPFTAICLSNLNFSMAADTGSSSW 406
Query: 301 QCQFVSGFTSQVFPLPCPQLQNKSSS 326
C VSG++ VFP PC +L++ SSS
Sbjct: 407 SCSNVSGYSEAVFPEPCTELRDPSSS 432
>gi|115489012|ref|NP_001066993.1| Os12g0554800 [Oryza sativa Japonica Group]
gi|113649500|dbj|BAF30012.1| Os12g0554800, partial [Oryza sativa Japonica Group]
Length = 424
Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 151/324 (46%), Positives = 215/324 (66%), Gaps = 2/324 (0%)
Query: 1 MDEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRT 60
+ EWPI++PLPSYG+G + G RH SLI+G ++T+V+ITG NG IDGQG WW+ + +
Sbjct: 81 VSEWPIVEPLPSYGQGIDLPGARHRSLINGHNVTDVVITGNNGIIDGQGLTWWNWFRSNK 140
Query: 61 LKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGID 120
L ++R HLVE ++S +I+ISNLT NSP W IHPV+C NV++ +TI L+AP TDGI
Sbjct: 141 LNYSRPHLVEFVDSEDIVISNLTLLNSPAWGIHPVFCSNVMVHDVTIRTSLDAPLTDGIV 200
Query: 121 PDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGS 180
PDS +N+CIED I D +++KSGWD+YGI + RP+S+I + RV + + GS
Sbjct: 201 PDSCSNMCIEDSSISVAHDAISLKSGWDNYGITIGRPASDIHISRVDLQASLGAALAFGS 260
Query: 181 EMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSND 240
EMSGGI ++ VD L++ ++ G+ KT GRGGYI ++ I +++ME V + I+ + +
Sbjct: 261 EMSGGISDIHVDHLNIHGSSRGILFKTAPGRGGYIRDVVISDVQMEDVNVAIKFTGDWST 320
Query: 241 HPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV--SLLGLAPSA 298
HPD +DP ALP I I+ N+V N + A VL+GI G F IC+ N+ SL S+
Sbjct: 321 HPDNHFDPSALPMINRITLKNMVGTNISVAGVLSGINGDPFTNICLSNISFSLADSTQSS 380
Query: 299 KWQCQFVSGFTSQVFPLPCPQLQN 322
W C +SG++ VFP PCP L +
Sbjct: 381 SWSCSNISGYSELVFPEPCPDLHH 404
>gi|23506093|gb|AAN28906.1| At3g42950/F18P9_110 [Arabidopsis thaliana]
Length = 484
Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 148/325 (45%), Positives = 213/325 (65%), Gaps = 13/325 (4%)
Query: 4 WPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKH 63
W ++ PLPSYG GRE G R+ S IHG +L +V++TG NG+I+GQGQ WW + + L H
Sbjct: 140 WSLLPPLPSYGYGREHHGPRYGSFIHGQNLRDVVVTGNNGSINGQGQTWWKKYRQKLLNH 199
Query: 64 TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAP-LNAPNTDGIDPD 122
TRG L ++M S++I+ +N+T R+SPFWT+HP C+NV I MTILAP APNTDGIDPD
Sbjct: 200 TRGPLAQIMWSSDIVFANITLRDSPFWTLHPYDCKNVTITNMTILAPVFEAPNTDGIDPD 259
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S ++ IE+ YI GDD +A+KSGWD YG +PS NI++R + + +G+ IGSEM
Sbjct: 260 SCEDMLIENSYISVGDDGIAIKSGWDQYGTTYGKPSKNILIRNLIIRSMVSAGISIGSEM 319
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGG+ N+TV+ + +W + GVRIKT GRGGY+ +IT RN+ ++ +++ I I N+HP
Sbjct: 320 SGGVSNITVENILIWSSRRGVRIKTAPGRGGYVRDITFRNVTLDELRVGIVIKTDYNEHP 379
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL----LGLAPSA 298
D G++P+A P + I++ + + PV I G++ EI +KNV+ +G+
Sbjct: 380 DGGFNPQAFPILENINYTGIYG-QGVRVPVR--IQGSK--EIPVKNVTFRDMSVGITYKK 434
Query: 299 K--WQCQFVSG-FTSQVFPLPCPQL 320
K +QC +V G +FP PC L
Sbjct: 435 KHIFQCAYVEGRVIGTIFPAPCDNL 459
>gi|81074755|gb|ABB55373.1| polygalacturonase-like protein-like [Solanum tuberosum]
Length = 479
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 148/327 (45%), Positives = 220/327 (67%), Gaps = 1/327 (0%)
Query: 1 MDEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRT 60
D W +++ LPSYGRG E GR+ SLI G++LT+V+ITG NGTIDGQG +WW+ + + +
Sbjct: 139 FDHWDVVEALPSYGRGIEAQYGRYRSLISGNNLTDVVITGNNGTIDGQGSIWWEKFNSHS 198
Query: 61 LKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGID 120
L +TR HLVE ++S N++ISNLT N+P W I P YC NVVI+ +T+ P ++P T+GI
Sbjct: 199 LNYTRPHLVEFVSSRNVVISNLTLLNAPGWNIRPAYCSNVVIQNLTVYTPQDSPFTNGIV 258
Query: 121 PDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGS 180
PDSS +VCIE+ I G D + +KSGWD YGI+ +P+SN+ +RRV + +GV +GS
Sbjct: 259 PDSSEHVCIENSNISMGYDAIVLKSGWDEYGISYGKPTSNVHIRRVRLQSAAGAGVALGS 318
Query: 181 EMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSND 240
EMSGGI +V V+ + D+ G+ +KT +GRGG+I++I I N+ M+ +++ I+ + S+
Sbjct: 319 EMSGGISDVLVELSSLHDSLFGIELKTARGRGGFIKDILISNVVMDNLQVGIKATGYSDM 378
Query: 241 HPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAK- 299
HPDE +DP +LP + GI+F ++V N + A G+ + F IC+ N+S+ + +
Sbjct: 379 HPDEKYDPSSLPTVSGITFEDIVGTNISIAGNFTGLSESPFTSICLSNISISISSDPSTP 438
Query: 300 WQCQFVSGFTSQVFPLPCPQLQNKSSS 326
W C +SG + V P PCP+LQ SS
Sbjct: 439 WLCSNISGSSKNVSPEPCPELQGSFSS 465
>gi|357151266|ref|XP_003575734.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 457
Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 150/325 (46%), Positives = 212/325 (65%), Gaps = 2/325 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
+WPI++PLPSYG+G + G RH+SLI+G ++T+V+ITG NG I+GQG +WWD + L
Sbjct: 116 QWPIVEPLPSYGQGLDLPGPRHLSLINGYNVTDVVITGNNGVINGQGSIWWDWLHSHELN 175
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
H+R HLVE ++S I+ISNLTF NSP W+IHPVYC V + +TI +AP TDGI PD
Sbjct: 176 HSRPHLVEFLHSEEIVISNLTFLNSPAWSIHPVYCSKVKVHNVTIKTSSDAPLTDGIVPD 235
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SS+NV IED I D +++KSGWD YGI++ +P+S+I + R+ + + + GSEM
Sbjct: 236 SSSNVVIEDSTISVSHDAISIKSGWDKYGISIGKPASDIHISRMDLQASSGAALAFGSEM 295
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI ++ D + + + G+ KT GRGGYI+ + I ++KM+ V + I + + HP
Sbjct: 296 SGGISDIHADNIQIHGSNKGISFKTTPGRGGYIDEVVISDVKMDDVIVAIEFTGNWSSHP 355
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLL--GLAPSAKW 300
DE +DP LP I I+ ++V N + A VL+GI G F IC+ NV+ L A S+ W
Sbjct: 356 DEDFDPSQLPVIGQITLKDMVGTNISVAGVLSGIDGDPFTAICLSNVNFLMAESAHSSSW 415
Query: 301 QCQFVSGFTSQVFPLPCPQLQNKSS 325
C VSG++ VFP PC +L SS
Sbjct: 416 SCSNVSGYSESVFPEPCSELHTPSS 440
>gi|449531087|ref|XP_004172519.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like,
partial [Cucumis sativus]
Length = 452
Score = 283 bits (725), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 144/324 (44%), Positives = 204/324 (62%), Gaps = 1/324 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
W +++PLPSYGRG E G R+ SLI+G +L +V+ITG +G IDGQG +WW+ + + +L
Sbjct: 110 HWELVNPLPSYGRGIEVPGKRYRSLINGYNLQDVVITGDDGVIDGQGLVWWNWFSSHSLN 169
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
++R HLVE +S +++SNLTF N+P + IHPVYC NV + +++ AP +P T GI PD
Sbjct: 170 YSRPHLVEFEDSQYVVVSNLTFLNTPAYNIHPVYCSNVYVYNISVSAPSESPYTVGIVPD 229
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SS +VCIE C I +G D +A+KSGWD YGIA RPS NI +RRV + + S + GSEM
Sbjct: 230 SSDHVCIEGCNIATGYDAIALKSGWDQYGIAYGRPSKNIHIRRVHLQSSSGSSIAFGSEM 289
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI NV V+ + + ++ G++I+T KGRGGYI+ I + +++ME + S HP
Sbjct: 290 SGGISNVLVEHVQLNNSFIGIQIRTTKGRGGYIKGIVVSDVEMENISTAFSASGHFGSHP 349
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKN-VSLLGLAPSAKWQ 301
D+ +DP ALP ++ I+ NV N A +GI + F I + N + + S W
Sbjct: 350 DDEYDPNALPIVQDITLQNVRGTNIKIAGNFSGIQESPFTSIYLSNITFSINSSSSTSWI 409
Query: 302 CQFVSGFTSQVFPLPCPQLQNKSS 325
C VSGF+ V P PC L S
Sbjct: 410 CSDVSGFSESVIPPPCSDLSTPYS 433
>gi|449432886|ref|XP_004134229.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 457
Score = 283 bits (725), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 144/324 (44%), Positives = 204/324 (62%), Gaps = 1/324 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
W +++PLPSYGRG E G R+ SLI+G +L +V+ITG +G IDGQG +WW+ + + +L
Sbjct: 115 HWELVNPLPSYGRGIEVPGKRYRSLINGYNLQDVVITGDDGVIDGQGLVWWNWFSSHSLN 174
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
++R HLVE +S +++SNLTF N+P + IHPVYC NV + +++ AP +P T GI PD
Sbjct: 175 YSRPHLVEFEDSQYVVVSNLTFLNTPAYNIHPVYCSNVYVYNISVSAPSESPYTVGIVPD 234
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SS +VCIE C I +G D +A+KSGWD YGIA RPS NI +RRV + + S + GSEM
Sbjct: 235 SSDHVCIEGCNIATGYDAIALKSGWDQYGIAYGRPSKNIHIRRVHLQSSSGSSIAFGSEM 294
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI NV V+ + + ++ G++I+T KGRGGYI+ I + +++ME + S HP
Sbjct: 295 SGGISNVLVEHVQLNNSFIGIQIRTTKGRGGYIKGIVVSDVEMENISTAFSASGHFGSHP 354
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKN-VSLLGLAPSAKWQ 301
D+ +DP ALP ++ I+ NV N A +GI + F I + N + + S W
Sbjct: 355 DDEYDPNALPIVQDITLQNVRGTNIKIAGNFSGIQESPFTSIYLSNITFSINSSSSTSWI 414
Query: 302 CQFVSGFTSQVFPLPCPQLQNKSS 325
C VSGF+ V P PC L S
Sbjct: 415 CSDVSGFSESVIPPPCSDLSTPYS 438
>gi|297742230|emb|CBI34379.3| unnamed protein product [Vitis vinifera]
Length = 433
Score = 281 bits (720), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 149/324 (45%), Positives = 199/324 (61%), Gaps = 51/324 (15%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
EWP+IDPLPSYGRGR+ GGR+ISLI G +LT+V+ITG NGTIDGQG +WW + LK
Sbjct: 126 EWPVIDPLPSYGRGRDTQGGRYISLIFGTNLTDVVITGENGTIDGQGALWWAKFHKGELK 185
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+TR +L+E+M+S+N+ IS+LT NSP W +HPVY NV+I+G+TI AP+ +PNTDGI+PD
Sbjct: 186 YTRPYLIEIMHSDNVQISSLTLVNSPSWNVHPVYSSNVIIQGLTITAPVTSPNTDGINPD 245
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S TN IEDCYI SGDD +AVKSGWD YGIA P+ +++RR++ +P + + +GSEM
Sbjct: 246 SCTNTRIEDCYIVSGDDCIAVKSGWDEYGIAYGMPTKQLVIRRLTCISPFSATIALGSEM 305
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI +V + + D +GVRIKT
Sbjct: 306 SGGIEDVRAEDILAIDTESGVRIKT----------------------------------- 330
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAK--- 299
GI++ ++V+ N T A L GI G F IC+ NV+ +GLA AK
Sbjct: 331 ------------AGINYRDMVAENVTMAGRLEGISGDPFTGICISNVT-IGLAKKAKKAP 377
Query: 300 WQCQFVSGFTSQVFPLPCPQLQNK 323
W C ++G TS V P PC L ++
Sbjct: 378 WTCTDIAGITSGVVPQPCDLLPDQ 401
>gi|297830296|ref|XP_002883030.1| hypothetical protein ARALYDRAFT_318449 [Arabidopsis lyrata subsp.
lyrata]
gi|297328870|gb|EFH59289.1| hypothetical protein ARALYDRAFT_318449 [Arabidopsis lyrata subsp.
lyrata]
Length = 452
Score = 280 bits (716), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 144/324 (44%), Positives = 202/324 (62%), Gaps = 2/324 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
W ++ PLPSYGRG E G R+ SLI+GD+L +V+ITG NGT DGQG WW+ +L
Sbjct: 111 HWDVVSPLPSYGRGIELPGKRYRSLINGDNLIDVVITGENGTFDGQGAAWWEWLETGSLN 170
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
++R H++E ++S +ILISNLTF N+P IHPVYC + I+ + I +++P G+ PD
Sbjct: 171 YSRPHIIEFVSSKHILISNLTFLNAPSINIHPVYCSQIHIRKVLIETSVDSPYVLGVAPD 230
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SS NVCIED I G D V++KSGWD YGI RP++ + +R +S +PT +G+ GSEM
Sbjct: 231 SSDNVCIEDSTINVGHDAVSLKSGWDQYGIHYGRPTTAVYIRNLSLKSPTGAGISFGSEM 290
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI +VTV++L++ + GV +T +GRGGYI NITI ++ + V I + + HP
Sbjct: 291 SGGISDVTVERLNIQSSHVGVAFRTTRGRGGYIRNITISDVDLTSVDTAIVANGHTGSHP 350
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQC 302
D+ +D ALP + I N V+ A L GI + F IC+ ++ L S W C
Sbjct: 351 DDKFDWDALPVVTHIVLRNFTGVDIGLAGNLTGIGESPFTSICLTDIHL--HTHSDSWIC 408
Query: 303 QFVSGFTSQVFPLPCPQLQNKSSS 326
VSGF+ V P PC +L + SS
Sbjct: 409 SNVSGFSDDVSPEPCQELMSSPSS 432
>gi|297833452|ref|XP_002884608.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297330448|gb|EFH60867.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 446
Score = 279 bits (713), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 138/326 (42%), Positives = 200/326 (61%), Gaps = 1/326 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
W ++DPLPSYGRG + G R+ SLI+G+ L +V++TG NGTIDGQG +WWD + + +LK
Sbjct: 116 HWEVVDPLPSYGRGTDLPGKRYKSLINGNMLHDVVVTGDNGTIDGQGLVWWDRFTSHSLK 175
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+ R HL+E ++S N+++SNLTF N+P +TIH +Y +V I + + +P T GI PD
Sbjct: 176 YNRPHLIEFLSSKNVIVSNLTFLNAPAYTIHSIYSSHVYIHKILAHSSPESPYTIGIVPD 235
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SS VCI++ I G D +++KSGWD YGIA +RP+ N+ +R V + S + GSEM
Sbjct: 236 SSNYVCIQNSTINVGYDAISLKSGWDEYGIAYSRPTENVHIRNVYLRGASGSSISFGSEM 295
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI +V VD H+ ++ G+ +T KGRGGYI+ I I NI M R+ I + HP
Sbjct: 296 SGGISDVVVDNAHMHNSLTGIAFRTTKGRGGYIKEIDISNIDMSRIGTAIVANGSFGSHP 355
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL-LGLAPSAKWQ 301
D+ +D ALP + I N+ N A L GI + F + + N++L S WQ
Sbjct: 356 DDKYDANALPLVSHIRLSNISGENIGIAGKLFGIKESPFSAVALSNIALSTSSGSSVSWQ 415
Query: 302 CQFVSGFTSQVFPLPCPQLQNKSSSW 327
C +V G + V P PCP+L+ ++
Sbjct: 416 CSYVYGSSESVIPEPCPELKRDDDAY 441
>gi|21553827|gb|AAM62920.1| polygalacturonase, putative [Arabidopsis thaliana]
Length = 453
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 141/324 (43%), Positives = 204/324 (62%), Gaps = 1/324 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
W ++ PLPSYGRG E G R+ SLI+GD+L +V+ITG NGT DGQG WW+ + +L
Sbjct: 111 HWDVVSPLPSYGRGIELPGKRYRSLINGDNLIDVVITGENGTFDGQGAAWWEWLESGSLN 170
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
++R H++E ++S +ILISNLTF N+P IHPVYC + I+ + I +++P+ G+ PD
Sbjct: 171 YSRPHIIEFVSSKHILISNLTFLNAPAINIHPVYCSQIHIRKVLIETSVDSPHVLGVAPD 230
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SS NVCIED I G D V++KSGWD YGI RP++ + +R + +PT +G+ GSEM
Sbjct: 231 SSDNVCIEDSTINVGHDAVSLKSGWDQYGIHYGRPTTAVHIRNLRLKSPTGAGISFGSEM 290
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGG+ +VTV++L++ + GV +T +GRGGYI NITI ++ + V I + + HP
Sbjct: 291 SGGVSDVTVERLNIHSSLIGVAFRTTRGRGGYIRNITISDVDLTSVDTAIVTNGHTGSHP 350
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQC 302
D+ +D ALP + I N V+ A L GI + F IC+ ++ L + + W C
Sbjct: 351 DDKFDRDALPVVTHIVMRNFTGVDIGVAGNLTGIGESPFTSICLADIHLQTRSEES-WIC 409
Query: 303 QFVSGFTSQVFPLPCPQLQNKSSS 326
VSGF+ V P PC +L + SS
Sbjct: 410 SNVSGFSDDVSPEPCQELMSSPSS 433
>gi|7939578|dbj|BAA95779.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 453
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 141/324 (43%), Positives = 204/324 (62%), Gaps = 1/324 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
W ++ PLPSYGRG E G R+ SLI+GD+L +V+ITG NGT DGQG WW+ + +L
Sbjct: 111 HWDVVSPLPSYGRGIELPGKRYRSLINGDNLIDVVITGENGTFDGQGAAWWEWLESGSLN 170
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
++R H++E ++S +ILISNLTF N+P IHPVYC + I+ + I +++P+ G+ PD
Sbjct: 171 YSRPHIIEFVSSKHILISNLTFLNAPAINIHPVYCSQIHIRKVLIETSVDSPHVLGVAPD 230
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SS NVCIED I G D V++KSGWD YGI RP++ + +R + +PT +G+ GSEM
Sbjct: 231 SSDNVCIEDSTINVGHDAVSLKSGWDQYGIHYGRPTTAVHIRNLRLKSPTGAGISFGSEM 290
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGG+ +VTV++L++ + GV +T +GRGGYI NITI ++ + V I + + HP
Sbjct: 291 SGGVSDVTVERLNIHSSLIGVAFRTTRGRGGYIRNITISDVDLTSVDTAIVANGHTGSHP 350
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQC 302
D+ +D ALP + I N V+ A L GI + F IC+ ++ L + + W C
Sbjct: 351 DDKFDRDALPVVTHIVMRNFTGVDIGVAGNLTGIGESPFTSICLADIHLQTRSEES-WIC 409
Query: 303 QFVSGFTSQVFPLPCPQLQNKSSS 326
VSGF+ V P PC +L + SS
Sbjct: 410 SNVSGFSDDVSPEPCQELMSSPSS 433
>gi|15228881|ref|NP_188308.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|14334802|gb|AAK59579.1| putative polygalacturonase [Arabidopsis thaliana]
gi|21280835|gb|AAM44924.1| putative polygalacturonase [Arabidopsis thaliana]
gi|332642352|gb|AEE75873.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 455
Score = 278 bits (711), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 141/324 (43%), Positives = 204/324 (62%), Gaps = 1/324 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
W ++ PLPSYGRG E G R+ SLI+GD+L +V+ITG NGT DGQG WW+ + +L
Sbjct: 113 HWDVVSPLPSYGRGIELPGKRYRSLINGDNLIDVVITGENGTFDGQGAAWWEWLESGSLN 172
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
++R H++E ++S +ILISNLTF N+P IHPVYC + I+ + I +++P+ G+ PD
Sbjct: 173 YSRPHIIEFVSSKHILISNLTFLNAPAINIHPVYCSQIHIRKVLIETSVDSPHVLGVAPD 232
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SS NVCIED I G D V++KSGWD YGI RP++ + +R + +PT +G+ GSEM
Sbjct: 233 SSDNVCIEDSTINVGHDAVSLKSGWDQYGIHYGRPTTAVHIRNLRLKSPTGAGISFGSEM 292
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGG+ +VTV++L++ + GV +T +GRGGYI NITI ++ + V I + + HP
Sbjct: 293 SGGVSDVTVERLNIHSSLIGVAFRTTRGRGGYIRNITISDVDLTSVDTAIVANGHTGSHP 352
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQC 302
D+ +D ALP + I N V+ A L GI + F IC+ ++ L + + W C
Sbjct: 353 DDKFDRDALPVVTHIVMRNFTGVDIGVAGNLTGIGESPFTSICLADIHLQTRSEES-WIC 411
Query: 303 QFVSGFTSQVFPLPCPQLQNKSSS 326
VSGF+ V P PC +L + SS
Sbjct: 412 SNVSGFSDDVSPEPCQELMSSPSS 435
>gi|297792177|ref|XP_002863973.1| polygalacturonase [Arabidopsis lyrata subsp. lyrata]
gi|297309808|gb|EFH40232.1| polygalacturonase [Arabidopsis lyrata subsp. lyrata]
Length = 447
Score = 276 bits (707), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 139/328 (42%), Positives = 201/328 (61%), Gaps = 3/328 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
W + D LPSYGRG + G R++SLI+GD L +V++TG NGTIDGQG +WWD + + +L+
Sbjct: 114 HWQVADALPSYGRGIDLPGKRYMSLINGDTLHDVVVTGDNGTIDGQGLVWWDRFNSHSLE 173
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
++R HLVE ++S N+++SNLTF N+P +TIH VYC N+ I +T +P T GI PD
Sbjct: 174 YSRPHLVEFVSSGNVIVSNLTFLNAPAYTIHSVYCSNLYIHRVTANTSPESPYTIGIVPD 233
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SS NVCI+D I G D +++KSGWD YGI+ ARP++N+ ++ V + S + GSEM
Sbjct: 234 SSENVCIQDSSINMGYDAISLKSGWDEYGISYARPTANVQIKNVYLGAASGSSISFGSEM 293
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI +V V H+ ++ +G+ +T GRGGYI+ I I NI M V + HP
Sbjct: 294 SGGISDVEVRDAHIHNSLSGISFRTTNGRGGYIKEIDISNIHMVNVGTAFLANGSFGTHP 353
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLL---GLAPSAK 299
D G+D A P + I ++ N + A G + F I + N+SL +P+
Sbjct: 354 DSGFDANAFPLVSHIRLHDIAGENISTAGYFFGTEESPFTSILLSNISLSIKNSDSPADF 413
Query: 300 WQCQFVSGFTSQVFPLPCPQLQNKSSSW 327
WQC +V G + V P PC +L++ SS+
Sbjct: 414 WQCSYVDGSSEFVVPEPCLELKSFDSSY 441
>gi|79330402|ref|NP_001032043.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|110739511|dbj|BAF01664.1| hypothetical protein [Arabidopsis thaliana]
gi|332008402|gb|AED95785.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 447
Score = 273 bits (698), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 137/328 (41%), Positives = 201/328 (61%), Gaps = 3/328 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
W + D LPSYGRG + G R++SLI+GD L +V++TG NGTIDGQG +WWD + + +L+
Sbjct: 114 HWQVTDALPSYGRGIDLPGKRYMSLINGDMLHDVVVTGDNGTIDGQGLVWWDRFNSHSLE 173
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
++R HLVE +++ N+++SNLTF N+P +TIH VYCRN+ I +T +P T GI PD
Sbjct: 174 YSRPHLVEFVSAENVIVSNLTFLNAPAYTIHSVYCRNLYIHRVTANTCPESPYTIGIVPD 233
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SS NVCI++ I G D +++KSG D YG++ ARP++N+ +R V + S + GSEM
Sbjct: 234 SSENVCIQESSINMGYDAISLKSGCDEYGLSYARPTANVQIRNVYLRAASGSSISFGSEM 293
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI +V V H+ ++ +G+ +T GRGGYI+ I I NI M V + HP
Sbjct: 294 SGGISDVEVSDAHIHNSLSGIAFRTTNGRGGYIKEIDISNIHMVNVGTAFLANGSFGTHP 353
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLL---GLAPSAK 299
D G+D A P + I ++V N + A G + F I + N+SL +P+
Sbjct: 354 DSGFDENAYPLVSHIRLHDIVGENISTAGYFFGTKESPFTSILLSNISLSIKNSASPADS 413
Query: 300 WQCQFVSGFTSQVFPLPCPQLQNKSSSW 327
WQC +V G + V P PC +L++ S +
Sbjct: 414 WQCSYVDGSSEFVVPEPCLELKSFDSYY 441
>gi|22327662|ref|NP_680409.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|20258821|gb|AAM14020.1| unknown protein [Arabidopsis thaliana]
gi|22136814|gb|AAM91751.1| unknown protein [Arabidopsis thaliana]
gi|332008401|gb|AED95784.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 449
Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 137/328 (41%), Positives = 201/328 (61%), Gaps = 3/328 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
W + D LPSYGRG + G R++SLI+GD L +V++TG NGTIDGQG +WWD + + +L+
Sbjct: 116 HWQVTDALPSYGRGIDLPGKRYMSLINGDMLHDVVVTGDNGTIDGQGLVWWDRFNSHSLE 175
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
++R HLVE +++ N+++SNLTF N+P +TIH VYCRN+ I +T +P T GI PD
Sbjct: 176 YSRPHLVEFVSAENVIVSNLTFLNAPAYTIHSVYCRNLYIHRVTANTCPESPYTIGIVPD 235
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SS NVCI++ I G D +++KSG D YG++ ARP++N+ +R V + S + GSEM
Sbjct: 236 SSENVCIQESSINMGYDAISLKSGCDEYGLSYARPTANVQIRNVYLRAASGSSISFGSEM 295
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI +V V H+ ++ +G+ +T GRGGYI+ I I NI M V + HP
Sbjct: 296 SGGISDVEVSDAHIHNSLSGIAFRTTNGRGGYIKEIDISNIHMVNVGTAFLANGSFGTHP 355
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLL---GLAPSAK 299
D G+D A P + I ++V N + A G + F I + N+SL +P+
Sbjct: 356 DSGFDENAYPLVSHIRLHDIVGENISTAGYFFGTKESPFTSILLSNISLSIKNSASPADS 415
Query: 300 WQCQFVSGFTSQVFPLPCPQLQNKSSSW 327
WQC +V G + V P PC +L++ S +
Sbjct: 416 WQCSYVDGSSEFVVPEPCLELKSFDSYY 443
>gi|30679999|ref|NP_850525.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|20260262|gb|AAM13029.1| unknown protein [Arabidopsis thaliana]
gi|22136514|gb|AAM91335.1| unknown protein [Arabidopsis thaliana]
gi|332640935|gb|AEE74456.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 446
Score = 270 bits (691), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 136/326 (41%), Positives = 199/326 (61%), Gaps = 1/326 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
W ++DPLPSYGRG + G R+ SLI+G+ L +V++TG NGTIDGQG +WWD + + +LK
Sbjct: 116 HWEVVDPLPSYGRGIDLPGKRYKSLINGNKLHDVVVTGDNGTIDGQGLVWWDRFTSHSLK 175
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+ R HL+E ++S N+++SNLTF N+P ++I+ +Y +V I + + +P T GI PD
Sbjct: 176 YNRPHLIEFLSSENVIVSNLTFLNAPAYSIYSIYSSHVYIHKILAHSSPKSPYTIGIVPD 235
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SS VCI++ I G D +++KSGWD YGIA +RP+ N+ +R V + S + GSEM
Sbjct: 236 SSDYVCIQNSTINVGYDAISLKSGWDEYGIAYSRPTENVHIRNVYLRGASGSSISFGSEM 295
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI +V VD H+ + G+ +T KGRGGYI+ I I NI M R+ I + HP
Sbjct: 296 SGGISDVVVDNAHIHYSLTGIAFRTTKGRGGYIKEIDISNIDMLRIGTAIVANGSFGSHP 355
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV-SLLGLAPSAKWQ 301
D+ +D ALP + I N+ N A L GI + F + + NV + S WQ
Sbjct: 356 DDKYDVNALPLVSHIRLSNISGENIGIAGKLFGIKESPFSSVTLSNVSLSMSSGSSVSWQ 415
Query: 302 CQFVSGFTSQVFPLPCPQLQNKSSSW 327
C +V G + V P PCP+L+ + ++
Sbjct: 416 CSYVYGSSESVIPEPCPELKRDADAY 441
>gi|21593399|gb|AAM65366.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 377
Score = 270 bits (690), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 136/326 (41%), Positives = 199/326 (61%), Gaps = 1/326 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
W ++DPLPSYGRG + G R+ SLI+G+ L +V++TG NGTIDGQG +WWD + + +LK
Sbjct: 47 HWEVVDPLPSYGRGIDLPGKRYKSLINGNKLHDVVVTGDNGTIDGQGLVWWDRFTSHSLK 106
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+ R HL+E ++S N+++SNLTF N+P ++I+ +Y +V I + + +P T GI PD
Sbjct: 107 YNRPHLIEFLSSENVIVSNLTFLNAPAYSIYSIYSSHVYIHKILAHSSPKSPYTIGIVPD 166
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SS VCI++ I G D +++KSGWD YGIA +RP+ N+ +R V + S + GSEM
Sbjct: 167 SSDYVCIQNSTINVGYDAISLKSGWDEYGIAYSRPTENVHIRNVYLRGASGSSISFGSEM 226
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI +V VD H+ + G+ +T KGRGGYI+ I I NI M R+ I + HP
Sbjct: 227 SGGISDVVVDNAHIHYSLTGIAFRTTKGRGGYIKEIDISNIDMLRIGTAIVANGSFGSHP 286
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV-SLLGLAPSAKWQ 301
D+ +D ALP + I N+ N A L GI + F + + NV + S WQ
Sbjct: 287 DDKYDVNALPLVSHIRLSNISGENIGIAGKLFGIKESPFSSVTLSNVSLSMSSGSSVSWQ 346
Query: 302 CQFVSGFTSQVFPLPCPQLQNKSSSW 327
C +V G + V P PCP+L+ + ++
Sbjct: 347 CSYVYGSSESVIPEPCPELKRDADAY 372
>gi|18397713|ref|NP_566292.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|30680007|ref|NP_850526.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|7549636|gb|AAF63821.1| unknown protein [Arabidopsis thaliana]
gi|332640933|gb|AEE74454.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|332640934|gb|AEE74455.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 377
Score = 270 bits (690), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 136/326 (41%), Positives = 199/326 (61%), Gaps = 1/326 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
W ++DPLPSYGRG + G R+ SLI+G+ L +V++TG NGTIDGQG +WWD + + +LK
Sbjct: 47 HWEVVDPLPSYGRGIDLPGKRYKSLINGNKLHDVVVTGDNGTIDGQGLVWWDRFTSHSLK 106
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+ R HL+E ++S N+++SNLTF N+P ++I+ +Y +V I + + +P T GI PD
Sbjct: 107 YNRPHLIEFLSSENVIVSNLTFLNAPAYSIYSIYSSHVYIHKILAHSSPKSPYTIGIVPD 166
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SS VCI++ I G D +++KSGWD YGIA +RP+ N+ +R V + S + GSEM
Sbjct: 167 SSDYVCIQNSTINVGYDAISLKSGWDEYGIAYSRPTENVHIRNVYLRGASGSSISFGSEM 226
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI +V VD H+ + G+ +T KGRGGYI+ I I NI M R+ I + HP
Sbjct: 227 SGGISDVVVDNAHIHYSLTGIAFRTTKGRGGYIKEIDISNIDMLRIGTAIVANGSFGSHP 286
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV-SLLGLAPSAKWQ 301
D+ +D ALP + I N+ N A L GI + F + + NV + S WQ
Sbjct: 287 DDKYDVNALPLVSHIRLSNISGENIGIAGKLFGIKESPFSSVTLSNVSLSMSSGSSVSWQ 346
Query: 302 CQFVSGFTSQVFPLPCPQLQNKSSSW 327
C +V G + V P PCP+L+ + ++
Sbjct: 347 CSYVYGSSESVIPEPCPELKRDADAY 372
>gi|91806548|gb|ABE66001.1| glycoside hydrolase family 28 protein/polygalacturonase family
protein [Arabidopsis thaliana]
Length = 416
Score = 257 bits (657), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 144/327 (44%), Positives = 188/327 (57%), Gaps = 58/327 (17%)
Query: 3 EWPIIDPLPSYGRGRERLG-GRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTL 61
EWP+I PLPSYG+GR+ G GR SLI G +LT+V+ITG NGTI+GQGQ WWD + +
Sbjct: 118 EWPVIAPLPSYGKGRDGTGTGRFNSLISGTNLTDVVITGNNGTINGQGQYWWDKFKKKQF 177
Query: 62 KHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDP 121
K TR +L+E++ S NI ISN+T +SP W IHPVYC +V++K +T+LAP+ PNTDGI+P
Sbjct: 178 KITRPYLIEILFSKNIQISNITLIDSPSWNIHPVYCNSVIVKSVTVLAPVTVPNTDGINP 237
Query: 122 DSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSE 181
DS TN IEDCYI SGDD +AVKSGWD YGI A VG G+
Sbjct: 238 DSCTNTLIEDCYIVSGDDCIAVKSGWDQYGIKTA--------------------VGRGA- 276
Query: 182 MSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDH 241
Y+++I R I M+ +K +S H
Sbjct: 277 --------------------------------YVKDIYARRITMKTMKYVFWMSGNYGSH 304
Query: 242 PDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAK-- 299
PDEG+DPKALP+I I++ ++ + N T + L GI F IC+ NV+ + LA AK
Sbjct: 305 PDEGFDPKALPEITNINYRDMTAENVTMSASLDGIDKDPFTGICISNVT-IALAAKAKKM 363
Query: 300 -WQCQFVSGFTSQVFPLPCPQLQNKSS 325
W C V+G TS+V P PC L K +
Sbjct: 364 QWNCTDVAGVTSRVTPEPCSLLPEKKA 390
>gi|219887583|gb|ACL54166.1| unknown [Zea mays]
Length = 463
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 119/197 (60%), Positives = 152/197 (77%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
EWPI+DPLPSYGRGR+++GGR SLI G +LT+V+ITG NGTIDGQG MWW + LK
Sbjct: 127 EWPIVDPLPSYGRGRDKVGGRFASLIGGSNLTDVVITGSNGTIDGQGAMWWSKFHKNQLK 186
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+TRG+L+ELM+S+ I ISNLT NSP W IHPVY N+V++G+TILAP N+PNTDGI+PD
Sbjct: 187 YTRGYLIELMHSDTIYISNLTLLNSPAWNIHPVYSSNIVVQGITILAPTNSPNTDGINPD 246
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S ++V IEDCYI SGDD VA+KSGWD YGI+ PS +I++RR++ +PT + + +GSEM
Sbjct: 247 SCSHVRIEDCYIVSGDDCVAIKSGWDEYGISYGMPSQHIVIRRLTCVSPTSAVIALGSEM 306
Query: 183 SGGIFNVTVDQLHVWDA 199
SGG D H +A
Sbjct: 307 SGGGVRAAPDDAHHHEA 323
>gi|167523647|ref|XP_001746160.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775431|gb|EDQ89055.1| predicted protein [Monosiga brevicollis MX1]
Length = 464
Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 136/321 (42%), Positives = 194/321 (60%), Gaps = 5/321 (1%)
Query: 1 MDEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRT 60
+ +WPII P+PSYG+GR+ G RH S +HG +LT+V +TG NGTI+ G +WW N T
Sbjct: 142 LADWPIIPPMPSYGQGRDHPGPRHASFLHGFNLTDVTVTGNNGTINATGDIWWARHNNGT 201
Query: 61 LKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGID 120
+TRGHL E+M S + +S+LT +SPFWT+HPVY ++ +TIL P +PNTDG+D
Sbjct: 202 EVYTRGHLYEVMWSRQLEVSHLTLTHSPFWTVHPVYSQDFRAIDLTILNPPYSPNTDGVD 261
Query: 121 PDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGS 180
PDS+ +V I DCY +GDD VA+KSGWD YG + S+NI + +P +G+ +GS
Sbjct: 262 PDSTRDVVIRDCYFSTGDDSVAIKSGWDVYGYTVNISSNNITIENCVFHSPNAAGICLGS 321
Query: 181 EMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMER-VKIPIRISRGSN 239
EMSGGI NV + + G RIKT GRGGY+ N+T+ ++ +E +++ + +
Sbjct: 322 EMSGGIANVFARNITMTGCLQGFRIKTGMGRGGYVVNVTVEDVVIENSIQLAVGYNGHYG 381
Query: 240 DHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAK 299
HP G++P A P + IS +N N T+ L G+ +QF + +NV + G
Sbjct: 382 GHP-AGYNPLATPHVYNISLINARGGNNTQIAELVGLPNSQFRALRFQNVHITG---KQG 437
Query: 300 WQCQFVSGFTSQVFPLPCPQL 320
W C +SG V P CP L
Sbjct: 438 WTCSDISGTAQNVTPAACPSL 458
>gi|54290861|dbj|BAD61522.1| polygalacturonase-like [Oryza sativa Japonica Group]
Length = 261
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 120/249 (48%), Positives = 173/249 (69%), Gaps = 2/249 (0%)
Query: 84 FRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAV 143
F++SPFW IHPVYC NVVI+ +T+LAP ++PNTDGIDPDSS+NVCIEDCYI +GDDL+A+
Sbjct: 13 FQDSPFWNIHPVYCSNVVIRNVTVLAPHDSPNTDGIDPDSSSNVCIEDCYISTGDDLIAI 72
Query: 144 KSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGV 203
KSGWD YG+A RPSS+I +RR++G++P +G +GSE SGG+ +V + L+ + + G+
Sbjct: 73 KSGWDEYGMAYGRPSSHITIRRITGSSPF-AGFAVGSETSGGVEHVLAEHLNFFSSGFGI 131
Query: 204 RIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDPKALPKIRGISFVNVV 263
IKT+ GRGG+I N+T+ ++ ++ V+ +RI+ HPD+ +D ALP + G++ NV
Sbjct: 132 HIKTNTGRGGFIRNVTVSDVTLDSVRYGLRIAGDVGGHPDDRYDRNALPVVDGLTIKNVQ 191
Query: 264 SVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQCQFVSGFTSQVFPLPCPQLQNK 323
N +A + GI + F IC+ NV L G A W+C+ VSG V P PC +L +
Sbjct: 192 GQNIREAGSIKGIATSAFSRICLSNVKLNGGAAVRPWKCEAVSGAALDVQPSPCTELTST 251
Query: 324 SS-SWCSFS 331
S S+C+ S
Sbjct: 252 SGMSFCTNS 260
>gi|320166922|gb|EFW43821.1| polygalacturonase [Capsaspora owczarzaki ATCC 30864]
Length = 448
Score = 254 bits (648), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 128/315 (40%), Positives = 188/315 (59%), Gaps = 4/315 (1%)
Query: 6 IIDPLPSYGRGRERLG-GRHISLIHGDHLTNVIITGYNG--TIDGQGQMWWDLWWNRTLK 62
II LPSYGRGRE R+ SL+HG++L +V+IT NG IDG G WW L
Sbjct: 129 IIPALPSYGRGRETESIFRYSSLVHGENLDDVVITSDNGQGVIDGNGMGWWAAHRASNLT 188
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+TRGHLVELM + +I++ N+ RNSPFWTIHP NV++ +TI PL++PNTDG DPD
Sbjct: 189 YTRGHLVELMYTTDIMLVNVELRNSPFWTIHPYSSTNVLVSNVTINNPLDSPNTDGCDPD 248
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S V I++C GDD +AVKSGWD+ GI P++++++R ++ TPT + + IGSEM
Sbjct: 249 SCNQVVIQNCVFTVGDDCIAVKSGWDNPGIQYGVPTTDVVIRNMTMHTPTSAAIAIGSEM 308
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGG+ N+ + ++ ++G+R+K+ +GRGGY+ N+T + + VK + I+ H
Sbjct: 309 SGGVSNLLAQDIRAFNCSSGIRLKSARGRGGYLRNLTFDGVTLNDVKTALSINDFYGQHE 368
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQC 302
+DP A+P I I N+V T G+ + + + NVS L + S + C
Sbjct: 369 SIFYDPLAVPIIDSIFMSNIVGTAITIPGDFQGLFDAKITNVAISNVS-LAVVGSGSYTC 427
Query: 303 QFVSGFTSQVFPLPC 317
+ +G V P+ C
Sbjct: 428 SYATGTQHAVVPVLC 442
>gi|413949760|gb|AFW82409.1| hypothetical protein ZEAMMB73_244455 [Zea mays]
Length = 313
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 116/207 (56%), Positives = 153/207 (73%)
Query: 1 MDEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRT 60
M WP+I PLPSYGRGR+ G R+ + I G +LT+VIITG NGTI+G+GQ+WWD + +
Sbjct: 26 MKHWPLIAPLPSYGRGRDEPGARYSNFIGGSNLTDVIITGKNGTINGKGQVWWDKFHAKE 85
Query: 61 LKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGID 120
LK RGHL+EL+ S NI+ISN+TF N+P+W +HP YC NV I G+TILAP+N+PNTDGID
Sbjct: 86 LKFIRGHLLELLYSENIIISNVTFVNAPYWNLHPTYCTNVTISGVTILAPVNSPNTDGID 145
Query: 121 PDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGS 180
P SS+ V IEDCYI SGDD VAVKSGWD YGI PS +I+++R++ +PT + + + S
Sbjct: 146 PKSSSRVKIEDCYIVSGDDCVAVKSGWDEYGIRFNMPSQHIVIQRLTSVSPTSAMIALSS 205
Query: 181 EMSGGIFNVTVDQLHVWDAAAGVRIKT 207
EMSGGI +V + + +R+KT
Sbjct: 206 EMSGGIRDVRAKDSVAINTESAIRVKT 232
>gi|356574519|ref|XP_003555394.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like,
partial [Glycine max]
Length = 305
Score = 250 bits (639), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 128/283 (45%), Positives = 177/283 (62%), Gaps = 4/283 (1%)
Query: 52 WWDLWWNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPL 111
WWD + + TR +++E+M S+ I ISNLT NSP W +HP+Y N+ IKG+TILAP+
Sbjct: 2 WWDKFDKKQSNLTRPYMIEIMFSDQIQISNLTLVNSPSWFVHPIYSSNITIKGLTILAPV 61
Query: 112 NAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTP 171
++PNTDGIDPDS TN IEDCYI SGDD VAVKSGWD YGI +P+ ++++RR++ +P
Sbjct: 62 DSPNTDGIDPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIKFGKPTQHLVIRRLTCISP 121
Query: 172 TCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGG--YIENITIRNIKMERVK 229
+ + +GSEMSGGI +V V+ + + VRIKT GRG Y+++I ++ + + +K
Sbjct: 122 DSAVIALGSEMSGGIQDVRVEDIIAISTQSTVRIKTAVGRGAMXYVKDIFVKGMSLSTMK 181
Query: 230 IPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV 289
++ HPD G+DPKALP I GI++ +VV+ N T + L GI F IC+ NV
Sbjct: 182 YVFWMTGSYGSHPDAGFDPKALPNITGINYRDVVATNVTYSAKLEGISNAPFTGICISNV 241
Query: 290 SLLGLAPSAK--WQCQFVSGFTSQVFPLPCPQLQNKSSSWCSF 330
S+ K W C V+G TS V P C L K C F
Sbjct: 242 SIQVSEQRKKLQWNCTDVAGVTSNVSPNSCQLLPEKGKLGCPF 284
>gi|388521929|gb|AFK49026.1| unknown [Lotus japonicus]
Length = 388
Score = 249 bits (637), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 120/260 (46%), Positives = 167/260 (64%)
Query: 64 TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDS 123
TR +++E+M SN I ISNLT NSP W +HP+Y +++I+G+TILAP+++PNTDGIDPDS
Sbjct: 125 TRPYMIEIMYSNQIQISNLTLVNSPSWFVHPIYSSDIIIQGLTILAPVDSPNTDGIDPDS 184
Query: 124 STNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMS 183
+N IEDCYI SGDD +AVKSGWD YGI + PS +II+RR++ +P + + +GSEMS
Sbjct: 185 CSNTRIEDCYIVSGDDCIAVKSGWDEYGIKVGMPSQHIIIRRLTCISPDSAMIALGSEMS 244
Query: 184 GGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPD 243
GGI ++ + L + + VRIKT GRG Y+ NI + + + +K ++ HPD
Sbjct: 245 GGIQDIRAEDLTAINTQSAVRIKTAVGRGAYVRNIFVEGMNLFTMKYVFWMTGSYGSHPD 304
Query: 244 EGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQCQ 303
G+DPKALP I GI++ +V++ N L GI F IC+ N ++ + W C
Sbjct: 305 TGFDPKALPTITGINYRDVIAKNVAYPAKLEGIANDPFTGICISNANIEKVGKKLAWNCT 364
Query: 304 FVSGFTSQVFPLPCPQLQNK 323
V G TS V P PC LQ K
Sbjct: 365 DVHGVTSNVSPEPCALLQEK 384
>gi|129771144|gb|ABO31369.1| polygalacturonase [Gossypium hirsutum]
Length = 219
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 120/212 (56%), Positives = 162/212 (76%), Gaps = 1/212 (0%)
Query: 24 HISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKHTRGHLVELMNSNNILISNLT 83
H + + GD L +V+I G NGTIDGQG +WW++W L TR +LVE MNS I+ISN+
Sbjct: 2 HRASLPGDGLPDVVIRGENGTIDGQGGIWWNMWRQGNLPFTRPNLVEFMNSRGIIISNVI 61
Query: 84 FRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAV 143
F+NSPFW I PVYC NVVI+ +TILAP ++PNTDGIDPDSS+NVCIED +I +GDDLVAV
Sbjct: 62 FKNSPFWNIPPVYCSNVVIRYVTILAPTDSPNTDGIDPDSSSNVCIEDSFISTGDDLVAV 121
Query: 144 KSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGV 203
KSGWD YGI RPSS+I +RRV+G++P +G+ +GSE SGG+ +V + + ++++ GV
Sbjct: 122 KSGWDEYGIGYGRPSSHITIRRVTGSSP-FAGIAVGSETSGGVEHVLAENIVIYNSGIGV 180
Query: 204 RIKTDKGRGGYIENITIRNIKMERVKIPIRIS 235
IKT+ GRGG+I+NIT+ + ME V+ I+I+
Sbjct: 181 NIKTNIGRGGFIKNITVSPVFMENVRTGIKIA 212
>gi|302143796|emb|CBI22657.3| unnamed protein product [Vitis vinifera]
Length = 342
Score = 240 bits (613), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 114/212 (53%), Positives = 157/212 (74%), Gaps = 1/212 (0%)
Query: 4 WPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKH 63
+P+I+ LPSYG GR+ GGRH SLI G +LT+V+ITG NGT++GQG+ WWD + +
Sbjct: 127 YPLIEVLPSYGVGRDG-GGRHSSLIFGTNLTDVVITGGNGTLNGQGKYWWDKFRAKKYND 185
Query: 64 TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDS 123
TR +L+E+M SN++ ISNLT +SP W +HPVY RNV++K +TILAP+++PNTDGI+PDS
Sbjct: 186 TRPYLIEIMYSNHVQISNLTLIDSPSWNVHPVYSRNVLVKDLTILAPIDSPNTDGINPDS 245
Query: 124 STNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMS 183
V IEDC+I SGDD +AVKSGWD YG P+ ++++RR++ +P + + +GSEMS
Sbjct: 246 CKKVRIEDCFIVSGDDCIAVKSGWDQYGYKFGMPTKDLLIRRLTCISPDSATIALGSEMS 305
Query: 184 GGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYI 215
GGI NV + + D +G+RIKT GRGGYI
Sbjct: 306 GGIKNVWAEDITAIDTQSGIRIKTGIGRGGYI 337
>gi|297600007|ref|NP_001048308.2| Os02g0781000 [Oryza sativa Japonica Group]
gi|255671294|dbj|BAF10222.2| Os02g0781000, partial [Oryza sativa Japonica Group]
Length = 285
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 123/263 (46%), Positives = 169/263 (64%), Gaps = 7/263 (2%)
Query: 64 TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLN-APNTDGIDPD 122
TR L++LM S +I+++N+T +NSPFW HP C N+ + +TILAP++ APNTDGIDPD
Sbjct: 1 TRPPLLQLMWSKDIIVANITLKNSPFWHFHPYDCTNITVSNVTILAPISSAPNTDGIDPD 60
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S +V IE+CYI GDD +AVKSGWD YGIA RPS NI++R V + +G+ IGSEM
Sbjct: 61 SCQDVLIENCYISVGDDAIAVKSGWDQYGIAYGRPSRNIVIRNVMARSLVSAGISIGSEM 120
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI NVTV+ + +W++ G+RIKT GRGGYI +I+ RNI + V+ I I N+H
Sbjct: 121 SGGIANVTVEDVRIWESRRGLRIKTAIGRGGYIRDISYRNITFDNVRAGIVIKVDYNEHA 180
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLA-GIIGTQFEEICMKNVSLLGLAPSAK-- 299
D+G+D A P I ISF + + PV A G ++I +++S +G++ K
Sbjct: 181 DDGYDRDAFPDITNISFKEIHG-RGVRVPVRAHGSSDIPIKDISFQDMS-IGISYKKKHI 238
Query: 300 WQCQFVSG-FTSQVFPLPCPQLQ 321
+QC F+ G VFP PC L
Sbjct: 239 FQCSFIEGRVIGSVFPKPCENLD 261
>gi|219120807|ref|XP_002185635.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209582484|gb|ACI65105.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 451
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 131/333 (39%), Positives = 188/333 (56%), Gaps = 17/333 (5%)
Query: 4 WPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYN---GTIDGQGQMWWDLWWNRT 60
WP+I PLPSYG+GR+ +G R+ SL+HG++LTN+ I G G IDGQG+ WWD +
Sbjct: 89 WPLIPPLPSYGQGRDHVGPRYSSLLHGEYLTNITIRGEPDSPGIIDGQGRYWWDRRRHNR 148
Query: 61 LKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGID 120
++TRGHLVE M S+ I + NL +NSPFWT H C +V ++ + + AP ++PNTDG D
Sbjct: 149 DRYTRGHLVEFMYSSRIRMYNLRLQNSPFWTNHFYDCDDVHVQNVHVKAPWSSPNTDGWD 208
Query: 121 PDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGS 180
PDSS NV IED GDD VA+KSGWD +GI PS NI +R V+ P +G+ IG+
Sbjct: 209 PDSSRNVLIEDSTYRGGDDCVAIKSGWDCFGIDYDTPSENITIRNVTCQGP-YAGIAIGT 267
Query: 181 EMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKM-----ERVKIPIRIS 235
EMSGG+ NVTV+ + A IKT RGGY+ ++ +NI++ + + + +
Sbjct: 268 EMSGGVRNVTVENVTFTYANKPANIKTGNTRGGYVHDVVYQNIRITGHIDQAIHVDMYHY 327
Query: 236 RGS-NDHPDEGWDPKALPKIRGISFVNV----VSVNTTKAPVLAGIIGTQFEEICMKNVS 290
+ N + P LP +R + F N + + G+ + E + ++N+S
Sbjct: 328 HNTPNPSCSNNYQPNQLPHLRDLYFFNFEGTQALTESHEVFHFVGLPESPIEYVFLENIS 387
Query: 291 LLGLAPSAKWQCQFVSGF--TSQVFPL-PCPQL 320
S W C V G + V P PCP+
Sbjct: 388 FPTPVSSLGWNCSNVQGSVKNNSVTPWPPCPEF 420
>gi|47497401|dbj|BAD19438.1| putative polygalacturonase [Oryza sativa Japonica Group]
Length = 277
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 119/255 (46%), Positives = 163/255 (63%), Gaps = 7/255 (2%)
Query: 72 MNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLN-APNTDGIDPDSSTNVCIE 130
M S +I+++N+T +NSPFW HP C N+ + +TILAP++ APNTDGIDPDS +V IE
Sbjct: 1 MWSKDIIVANITLKNSPFWHFHPYDCTNITVSNVTILAPISSAPNTDGIDPDSCQDVLIE 60
Query: 131 DCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVT 190
+CYI GDD +AVKSGWD YGIA RPS NI++R V + +G+ IGSEMSGGI NVT
Sbjct: 61 NCYISVGDDAIAVKSGWDQYGIAYGRPSRNIVIRNVMARSLVSAGISIGSEMSGGIANVT 120
Query: 191 VDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDPKA 250
V+ + +W++ G+RIKT GRGGYI +I+ RNI + V+ I I N+H D+G+D A
Sbjct: 121 VEDVRIWESRRGLRIKTAIGRGGYIRDISYRNITFDNVRAGIVIKVDYNEHADDGYDRDA 180
Query: 251 LPKIRGISFVNVVSVNTTKAPVLA-GIIGTQFEEICMKNVSLLGLAPSAK--WQCQFVSG 307
P I ISF + + PV A G ++I +++S +G++ K +QC F+ G
Sbjct: 181 FPDITNISFKEIHG-RGVRVPVRAHGSSDIPIKDISFQDMS-IGISYKKKHIFQCSFIEG 238
Query: 308 -FTSQVFPLPCPQLQ 321
VFP PC L
Sbjct: 239 RVIGSVFPKPCENLD 253
>gi|255545182|ref|XP_002513652.1| Exopolygalacturonase precursor, putative [Ricinus communis]
gi|223547560|gb|EEF49055.1| Exopolygalacturonase precursor, putative [Ricinus communis]
Length = 452
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 125/334 (37%), Positives = 184/334 (55%), Gaps = 42/334 (12%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
++PII LPS+G ++ GR SLI G +LT+V+ITG NGTIDGQG WWD + K
Sbjct: 131 DFPIIAALPSFGVEKDFPDGRFSSLIRGINLTDVVITGNNGTIDGQGAPWWDKFEKGLFK 190
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+R L+++M ++ + ISN+T NSP W +HPVYC NV+++G+TI+AP+ PNTDGI+P
Sbjct: 191 ASRPLLIDIMYTDQLQISNITLVNSPSWHVHPVYCSNVLVQGVTIIAPVEVPNTDGINPS 250
Query: 123 ----SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGI 178
SS + + I + D +G+ +
Sbjct: 251 RFLASSFHQYLNFPLISTSD-----------------------------------AGIAL 275
Query: 179 GSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGS 238
GSEMSGGI NV V+ + + + + VRIKT GRGGY+++I +R + ++ +K IS
Sbjct: 276 GSEMSGGIENVRVEDITAFTSQSAVRIKTAPGRGGYVKDIFVRRMTLQTMKYVFWISGNY 335
Query: 239 NDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL-LGLAPS 297
HPD+G+DP AL +I+ I++ ++V+ N + G F ICM NV++ L P
Sbjct: 336 KTHPDDGFDPNALAEIKNINYRDIVARNVNMSGAFDGFPTNHFTGICMSNVTIQLSQTPK 395
Query: 298 A-KWQCQFVSGFTSQVFPLPCPQLQNKSSSWCSF 330
+W C V G +S V P PC K C+F
Sbjct: 396 KPQWNCSNVEGVSSHVTPTPCSLFPEKPVD-CTF 428
>gi|359490607|ref|XP_003634121.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like
[Vitis vinifera]
Length = 492
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 134/332 (40%), Positives = 199/332 (59%), Gaps = 14/332 (4%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
++PI+ LPSYG GR SLI G +LT+V+ITG NGT +GQG+ WWD + + L
Sbjct: 115 DYPIVKALPSYGG----TAGRFSSLILGTNLTDVVITGGNGTTNGQGKPWWDKFHEKRLN 170
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
TR +L+E++ S + I+ T +SP W +HP+Y RNV+I+G+TI+AP+ PNTDGI+PD
Sbjct: 171 ATRPNLIEIVFSYQVQITX-TLIDSPSWNVHPIYSRNVIIQGLTIIAPVTVPNTDGINPD 229
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S TN+ +EDCYI SGDD +AVKS + G+ P+ +I+RR++ +P + + +G EM
Sbjct: 230 SCTNIRVEDCYIVSGDDSIAVKSALNENGVKCGMPTEGLIIRRLTCISPHSAVIALGREM 289
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
+G + NV + + D G+RIKT RGGY+++I +R + M+ ++ I P
Sbjct: 290 AGXM-NVRAEDITAIDXQFGIRIKTGLERGGYVKDIYVRRMTMKTMRFAFWIIGDYGPPP 348
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAK--- 299
G + P I GI++ ++V+ N T L GI G F C+ NV+ +GL ++
Sbjct: 349 APGHEG---PVIEGINYRDMVADNVTYPAQLHGISGGPFTGFCISNVT-IGLTEESRKQQ 404
Query: 300 WQCQFVSGFTSQVFPLPCPQLQ-NKSSSWCSF 330
W C V G TS+V P PC L +K C F
Sbjct: 405 WDCDEVQGITSRVTPQPCDLLSPSKEILNCPF 436
>gi|297745346|emb|CBI40426.3| unnamed protein product [Vitis vinifera]
Length = 379
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 100/153 (65%), Positives = 121/153 (79%)
Query: 1 MDEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRT 60
+ +WP+I PLPSYGRGR+ GR+ SLI G +LT+VIITG NGTIDGQG +WW +
Sbjct: 120 ISQWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIITGDNGTIDGQGGLWWQRFHGGK 179
Query: 61 LKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGID 120
LK+TR +L+ELM S +I ISNLT NSP W +HPVY RN++I+G+TILAP+ +PNTDGI+
Sbjct: 180 LKYTRPYLIELMYSADIQISNLTLLNSPSWNVHPVYSRNILIQGITILAPVRSPNTDGIN 239
Query: 121 PDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIA 153
PDS TN IEDCYI SGDD VAVKSGWD YGIA
Sbjct: 240 PDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIA 272
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Query: 262 VVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAK---WQCQFVSGFTSQVFPLPCP 318
+V+ N + A L GI F IC+ NV++ LA AK W C V G +S V P PC
Sbjct: 283 MVAENVSMAARLEGIPSDPFTGICISNVTI-HLAAKAKKVPWTCTDVEGISSGVTPTPCS 341
Query: 319 QLQNK---SSSWCSF 330
L ++ +S C+F
Sbjct: 342 TLPDQGPEKTSLCNF 356
>gi|255641037|gb|ACU20798.1| unknown [Glycine max]
Length = 186
Score = 207 bits (527), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 97/186 (52%), Positives = 137/186 (73%)
Query: 7 IDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKHTRG 66
+DPLPSYGRG + GR+ SLI+G +L++V+ITG NG IDGQG +WWDL +L ++R
Sbjct: 1 MDPLPSYGRGIDVPVGRYRSLIYGQNLSDVVITGDNGIIDGQGSVWWDLISTHSLNYSRP 60
Query: 67 HLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTN 126
H++EL+ S+NI+ISNLTF NSP W+IHPVYC N+ I+ +T+ AP P T GI PDSS +
Sbjct: 61 HIIELVGSDNIIISNLTFLNSPAWSIHPVYCSNIQIQKITVQAPTKFPYTSGIVPDSSEH 120
Query: 127 VCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGI 186
VCI++C I +G D + +KSGWD YG+A +P+SN+ +R V + + +G+ GSEMSGGI
Sbjct: 121 VCIDNCNISTGHDAIVLKSGWDEYGVAYGKPTSNVHIRGVYLQSSSGAGLAFGSEMSGGI 180
Query: 187 FNVTVD 192
++ +
Sbjct: 181 SDIIAE 186
>gi|223949035|gb|ACN28601.1| unknown [Zea mays]
Length = 376
Score = 207 bits (527), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 100/200 (50%), Positives = 140/200 (70%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
+W I++PLPSYG+G + G RH SLI G +LT+V+ITG NG IDGQG +WW + L
Sbjct: 117 QWLIVEPLPSYGQGLDLPGPRHQSLISGYNLTDVVITGNNGVIDGQGLVWWQWLRSHELN 176
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
H+R +L+E + S +I+ISNLTF NSP W+IHPVYC NV + +TI L+AP TDGI PD
Sbjct: 177 HSRPNLLEFLYSEDIVISNLTFLNSPAWSIHPVYCSNVKVHNVTIKTSLDAPLTDGIVPD 236
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S +N+CIED I + +++KSGWD YGI+ RP+S+I + RV + + + + GSEM
Sbjct: 237 SCSNLCIEDSTISVSHEAISLKSGWDRYGISFGRPTSDIRISRVDLLSSSGAALAFGSEM 296
Query: 183 SGGIFNVTVDQLHVWDAAAG 202
SGGI ++ V+ L + D++ G
Sbjct: 297 SGGISDIHVNHLRIHDSSKG 316
>gi|413941562|gb|AFW74211.1| hypothetical protein ZEAMMB73_002485 [Zea mays]
Length = 291
Score = 204 bits (520), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 95/134 (70%), Positives = 111/134 (82%), Gaps = 5/134 (3%)
Query: 2 DEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTL 61
+EWP+I PLPSYGRGRERLG RHISLIHG+ L +V+ITG NGTIDGQG MWW+LW NRTL
Sbjct: 161 EEWPLITPLPSYGRGRERLGPRHISLIHGEGLNDVVITGSNGTIDGQGHMWWELWRNRTL 220
Query: 62 KHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDP 121
HTRGHL+EL+NS N+LIS++T NSPFWT+HPVYC NVV+K +TILAPL+APNTDGIDP
Sbjct: 221 NHTRGHLIELVNSTNVLISSVTLSNSPFWTVHPVYCSNVVMKDLTILAPLDAPNTDGIDP 280
Query: 122 DSSTNVCIEDCYIE 135
+C CY
Sbjct: 281 ----GLC-ASCYFH 289
>gi|194696678|gb|ACF82423.1| unknown [Zea mays]
Length = 335
Score = 204 bits (520), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 99/198 (50%), Positives = 139/198 (70%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
+W I++PLPSYG+G + G RH SLI G +LT+V+ITG NG IDGQG +WW + L
Sbjct: 117 QWLIVEPLPSYGQGLDLPGPRHQSLISGYNLTDVVITGNNGVIDGQGLVWWQWLRSHELN 176
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
H+R +L+E + S +I+ISNLTF NSP W+IHPVYC NV + +TI L+AP TDGI PD
Sbjct: 177 HSRPNLLEFLYSEDIVISNLTFLNSPAWSIHPVYCSNVKVHNVTIKTSLDAPLTDGIVPD 236
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S +N+CIED I + +++KSGWD YGI+ RP+S+I + RV + + + + GSEM
Sbjct: 237 SCSNLCIEDSTISVSHEAISLKSGWDRYGISFGRPTSDIRISRVDLLSSSGAALAFGSEM 296
Query: 183 SGGIFNVTVDQLHVWDAA 200
SGGI ++ V+ L + D++
Sbjct: 297 SGGISDIHVNHLRIHDSS 314
>gi|302143795|emb|CBI22656.3| unnamed protein product [Vitis vinifera]
Length = 621
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 92/150 (61%), Positives = 118/150 (78%), Gaps = 1/150 (0%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
++P I PLPSYG+GR+ GGR SLI G +LT+V+I G NGTI+GQG++WWD + + L
Sbjct: 122 DYPHIPPLPSYGKGRDG-GGRFSSLIFGTNLTDVVIIGGNGTINGQGRVWWDKFKQKKLV 180
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
TR +L+E+M S+ + ISNLT +SP W +HPVYC +V+I+GMTILAP++ PNTDGI+PD
Sbjct: 181 DTRPYLIEIMFSDQVQISNLTLIDSPSWNVHPVYCSDVIIQGMTILAPVDVPNTDGINPD 240
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGI 152
S NV IEDCYI SGDD +AVKSGWD YGI
Sbjct: 241 SCANVKIEDCYIVSGDDCIAVKSGWDQYGI 270
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 91/164 (55%), Positives = 119/164 (72%), Gaps = 1/164 (0%)
Query: 4 WPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKH 63
+P+I+ LPSYG GR+ GGRH SLI G +LT+V+ITG NGTI GQGQ WWD + LK
Sbjct: 375 YPLIEILPSYGAGRDG-GGRHASLIFGTNLTDVVITGGNGTIHGQGQYWWDKFRADKLKD 433
Query: 64 TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDS 123
TR +L+E+M S+ + ISNL +SP W +HP Y NV+I+ +TI+AP+ +PNTDGI+PDS
Sbjct: 434 TRPYLIEIMYSDQVQISNLILIDSPSWNVHPTYSSNVIIQWLTIIAPVGSPNTDGINPDS 493
Query: 124 STNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVS 167
S NV IEDC+I SGDD +AVKSGWD YGI + ++ V+
Sbjct: 494 SKNVLIEDCFIVSGDDCIAVKSGWDQYGIKCGKGRIYMVAENVT 537
Score = 40.8 bits (94), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 38/80 (47%), Gaps = 6/80 (7%)
Query: 245 GWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAK---WQ 301
GWD + +G + +V+ N T + L GI G F IC+ NV +GL K W
Sbjct: 516 GWDQYGIKCGKG--RIYMVAENVTYSARLDGISGDPFTGICISNVK-IGLTEKPKKLQWN 572
Query: 302 CQFVSGFTSQVFPLPCPQLQ 321
C V G +SQV P C L
Sbjct: 573 CTNVEGVSSQVTPPSCDLLH 592
>gi|413923569|gb|AFW63501.1| hypothetical protein ZEAMMB73_605801 [Zea mays]
Length = 313
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 118/321 (36%), Positives = 174/321 (54%), Gaps = 47/321 (14%)
Query: 4 WPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKH 63
WP++ LPSYG GRER G R SLIHG +L +V+IT +
Sbjct: 11 WPLMPALPSYGYGRERKGPRFGSLIHGQNLRDVVITAFE--------------------- 49
Query: 64 TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDS 123
+++ ++N+ ++ P IHP + + I + ++ DS
Sbjct: 50 ---YIIHVLNA----LALYQTLEVPV-DIHPFFYNILSILTLALVT------------DS 89
Query: 124 STNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMS 183
+V IE+CYI GDD +A+KSGWD YGIA RPSS+I++R V+ + +G+ IGSEMS
Sbjct: 90 CQDVLIENCYISVGDDAIAIKSGWDQYGIAYGRPSSDILIRNVTARSLVSAGISIGSEMS 149
Query: 184 GGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPD 243
GG+ NVTV+ + +W++ GVRIKT GRGGYI NI+ RNI + V+ I I N+H D
Sbjct: 150 GGVANVTVENVRIWESRRGVRIKTATGRGGYIRNISYRNITFDNVRAGIVIKVDYNEHAD 209
Query: 244 EGWDPKALPKIRGISFVNVVSVNTTKAPVLA-GIIGTQFEEICMKNVSLLGLAPSAK--W 300
+G+D A P I ISF + + PV A G ++I +++S +G++ K +
Sbjct: 210 DGYDRTAFPDITSISFKGIHG-QGVRVPVRAHGSDVIPIKDISFQDMS-VGISYKKKHIF 267
Query: 301 QCQFVSGFTSQ-VFPLPCPQL 320
QC ++ G + VFP PC L
Sbjct: 268 QCSYLEGRVIRPVFPKPCENL 288
>gi|297816102|ref|XP_002875934.1| hypothetical protein ARALYDRAFT_906150 [Arabidopsis lyrata subsp.
lyrata]
gi|297321772|gb|EFH52193.1| hypothetical protein ARALYDRAFT_906150 [Arabidopsis lyrata subsp.
lyrata]
Length = 443
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 111/325 (34%), Positives = 174/325 (53%), Gaps = 43/325 (13%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
E+P++ LPSY R SLI+G +LT+V+I G GTI+GQG+ WW + N K
Sbjct: 128 EYPMLQVLPSY------RDTRFASLIYGSNLTDVVIAGDKGTINGQGKSWWAKYRNGGFK 181
Query: 63 H-TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDP 121
R L+E+ +S N+ ISN+ +SP W+IHPVYCRNV+IKG+ I P+++ NTDGI+P
Sbjct: 182 SIQRPMLIEIQSSENVQISNINLIDSPMWSIHPVYCRNVIIKGVKISNPIDSANTDGINP 241
Query: 122 DSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSE 181
+ RP +++RR S P +G+ +GSE
Sbjct: 242 --------------------------------VGRPIEMLLIRRFSCIAPNGAGIAMGSE 269
Query: 182 MSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDH 241
MSGGI V ++ + + + + ++I+T GRGGY++N+ R ++ K ++
Sbjct: 270 MSGGIKGVRMEDVTLHNTQSAIKIETAMGRGGYVQNVWARRFTIKTSKYVFLMTGSHKPI 329
Query: 242 PDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSA--- 298
P +G PKA P + I+F ++ N + + L G+ F +CM NVS + L+P+A
Sbjct: 330 PRDGNIPKAKPVVTNINFRDITGENVSTSAKLEGMKSNPFTGVCMSNVS-ISLSPNASKQ 388
Query: 299 KWQCQFVSGFTSQVFPLPCPQLQNK 323
++ C + G + V P PC L +K
Sbjct: 389 QFHCMDIVGESRSVKPQPCSLLPDK 413
>gi|414873754|tpg|DAA52311.1| TPA: hypothetical protein ZEAMMB73_541408 [Zea mays]
Length = 253
Score = 190 bits (483), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 94/210 (44%), Positives = 133/210 (63%), Gaps = 3/210 (1%)
Query: 121 PDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGS 180
PDSSTNVCI CY+ +G D++ +KSGWD YGI+ A+PSSNI + ++G T SG+ GS
Sbjct: 10 PDSSTNVCINHCYVRNGGDVIVIKSGWDEYGISFAQPSSNISISDITGETRGGSGIAFGS 69
Query: 181 EMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSND 240
EMSGGI V L + ++ G+RIKT GRGGY+EN+ I ++ M+ V + IRI+ +
Sbjct: 70 EMSGGISEVRAVGLRIVNSLHGIRIKTAPGRGGYVENVYIADVSMDNVSMAIRITGNYGE 129
Query: 241 HPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKW 300
HPD+ +D ALP I I+ +VV VN A +L GI G F IC+ NVS L + + W
Sbjct: 130 HPDDKYDSTALPVISNITIKDVVGVNIGVAGILEGIQGDNFSNICLSNVS-LSVQSAHPW 188
Query: 301 QCQFVSGFTSQVFPLPCPQLQN--KSSSWC 328
C + G+++ V P C QL++ + +S C
Sbjct: 189 NCSLIEGYSNSVIPESCEQLRSNCRQTSIC 218
>gi|317474355|ref|ZP_07933629.1| glycosyl hydrolase family 28 [Bacteroides eggerthii 1_2_48FAA]
gi|316909036|gb|EFV30716.1| glycosyl hydrolase family 28 [Bacteroides eggerthii 1_2_48FAA]
Length = 477
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 110/290 (37%), Positives = 159/290 (54%), Gaps = 23/290 (7%)
Query: 24 HISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWN----RT----------------LKH 63
+ SL G L NV ITG G IDGQG+ WWD +W RT LK+
Sbjct: 95 YASLFTGHDLKNVTITG-RGRIDGQGKAWWDAFWETDKMRTAAGIREREPENPEGSPLKY 153
Query: 64 TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDS 123
R ++ L N+ I++LT NSP WT+HPVYCRNV+I G++I+ P +PNTDGIDPD
Sbjct: 154 PRPRMINLYRCENVKIADLTITNSPSWTVHPVYCRNVIIDGISIIQPYESPNTDGIDPDC 213
Query: 124 STNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMS 183
V I +CYI+ GDD + +KSG++ +G P NI++ + S VGIGSEMS
Sbjct: 214 CNGVRISNCYIDCGDDCITLKSGYNEHGRKKGIPCENIVISNCTFAHGR-SAVGIGSEMS 272
Query: 184 GGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPD 243
GGI NVTV G+R+KT +GRGG +ENI I ME ++ I I G
Sbjct: 273 GGIKNVTVMNCVFKGTLRGLRVKTGRGRGGTVENIFASGIIMENLREGISIDMGYEGVSG 332
Query: 244 EGWD-PKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLL 292
+ + ++ P + I F +++ N +A + G+ + I ++++ ++
Sbjct: 333 KIYPVTESTPFFKNIRFKDIIGTNVEQAINIIGLAEAPPQFIVLEDIRMV 382
>gi|109509136|gb|ABG34277.1| polygalacturonase [Eucalyptus globulus subsp. globulus]
Length = 242
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 98/220 (44%), Positives = 134/220 (60%), Gaps = 5/220 (2%)
Query: 116 TDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSG 175
TDGI+PDS TNV IEDCYI SGDD VAVKSGWD YGIA P+ +I+RR++ +P +
Sbjct: 1 TDGINPDSCTNVRIEDCYIVSGDDCVAVKSGWDEYGIAFGMPTQQLIIRRLTCISPYSAT 60
Query: 176 VGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRIS 235
+ +GSEMSGGI +V + + + +G+RIKT GRG YI++I ++ + M +K ++
Sbjct: 61 IALGSEMSGGIRDVRAEDIVAINTESGIRIKTAVGRGAYIKDIYVKKMTMHTMKWAFKMD 120
Query: 236 RGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLA 295
HPD +DP ALP I+ I++ ++V+ N + A GI G +F ICM NV+L A
Sbjct: 121 GDYKSHPDNKYDPNALPVIQNINYRDMVAENVSVAARFNGIAGDKFTGICMANVTLGMTA 180
Query: 296 PSAK--WQCQFVSGFTSQVFPLPCPQLQNKSS---SWCSF 330
K W C V G TS V P PC L ++ S C F
Sbjct: 181 KHKKYPWTCTDVQGMTSGVTPPPCDSLPDQGPEKISACDF 220
>gi|323453807|gb|EGB09678.1| hypothetical protein AURANDRAFT_2438, partial [Aureococcus
anophagefferens]
Length = 295
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 99/219 (45%), Positives = 141/219 (64%), Gaps = 6/219 (2%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGT--IDGQGQMWWDLWWNRT 60
WP+I PSYG+GR+ G R+ SL+HG+H+ +V I G T +DG GQ WWD + T
Sbjct: 80 RWPLIPGAPSYGQGRDHPGPRYTSLVHGEHVEDVTIQGEGPTSVLDGNGQYWWDQVHSMT 139
Query: 61 LKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGID 120
+ TRGHL+E M S +I I +L+ R+SPFW H V ++ + I A N+PNTDG D
Sbjct: 140 V--TRGHLIEFMYSKDIRIYDLSMRDSPFWNNHFYDSERVHVRNVHISAKDNSPNTDGWD 197
Query: 121 PDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGS 180
PDS+ +V +E GDD VA+KSGWD +G+A +PS NI +R V+ T + +G+ IGS
Sbjct: 198 PDSARDVLVEHSTYVGGDDCVAIKSGWDCFGVAYGKPSRNITIRDVN-CTGSKAGIAIGS 256
Query: 181 EMSGGIFNVTVDQLHVWDAAAGV-RIKTDKGRGGYIENI 218
EMSGG+ +V V ++++ A G+ +KT RGGY+ N+
Sbjct: 257 EMSGGVEDVLVQRVNILGKANGIAHVKTGPTRGGYVRNV 295
>gi|359477236|ref|XP_003631950.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 275
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 89/198 (44%), Positives = 125/198 (63%), Gaps = 1/198 (0%)
Query: 122 DSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSE 181
DSS + CIEDC I G D +A+KSGWD YGIA RP++N+ +RRV+ + + S + GSE
Sbjct: 51 DSSDSTCIEDCSIAMGHDAIALKSGWDEYGIAYGRPTTNVHIRRVNLQSSSGSSLAFGSE 110
Query: 182 MSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDH 241
MSGGI NV V+Q+H++++ +G+ +T KGRGGYI+ I I ++ ME + + H
Sbjct: 111 MSGGISNVCVEQVHLYNSFSGIEFRTTKGRGGYIQEIIISDVAMENIHTAFSATGQIGSH 170
Query: 242 PDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSA-KW 300
PD+ +DP ALP + I+ NV+ N T A GI + F IC+ N+SL P++ W
Sbjct: 171 PDDHFDPNALPVLDHITLQNVIGTNITIAGSFTGIQESPFTSICLSNISLSTTPPASISW 230
Query: 301 QCQFVSGFTSQVFPLPCP 318
C VSGF+ VFP PCP
Sbjct: 231 VCSNVSGFSQWVFPEPCP 248
>gi|109509134|gb|ABG34276.1| polygalacturonase [Eucalyptus globulus subsp. globulus]
Length = 241
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 95/210 (45%), Positives = 134/210 (63%), Gaps = 4/210 (1%)
Query: 117 DGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGV 176
DGI+PDS TN IEDCYI SGDD VAVKSGWD YGIA P+ +++RR++ +PT + +
Sbjct: 1 DGINPDSCTNTKIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPTSAVI 60
Query: 177 GIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISR 236
+GSEMSGGI +V + + ++ +GVRIKT GRGGY+++I ++ + M +K ++
Sbjct: 61 ALGSEMSGGIEDVRAEDILAINSESGVRIKTAIGRGGYVKDIYVKGMTMRTMKWVFWMTG 120
Query: 237 GSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAP 296
H D +DP ALP I+ I++ ++V+ N T A L GI G F IC+ NV+ +GLA
Sbjct: 121 NYGSHADNNYDPNALPLIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVT-IGLAQ 179
Query: 297 SAK---WQCQFVSGFTSQVFPLPCPQLQNK 323
K W C +SG +S V P PC L N+
Sbjct: 180 KPKKLQWNCTDISGISSSVVPQPCNALPNQ 209
>gi|29121121|gb|AAO62947.1| putative polygalacturonase-like protein [Lactuca sativa]
gi|29121352|gb|AAO62948.1| putative polygalacturonase-like protein [Lactuca sativa]
Length = 193
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 89/194 (45%), Positives = 133/194 (68%), Gaps = 4/194 (2%)
Query: 117 DGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGV 176
DGIDPDSS++VCIED YI +GDDLVAVKSGWD YGI ARPS++I +RR++G++P +G+
Sbjct: 1 DGIDPDSSSHVCIEDSYISTGDDLVAVKSGWDQYGIKYARPSNDITIRRLTGSSP-FAGI 59
Query: 177 GIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISR 236
IGSE SGG++NV + + + + G+ +KT+ GRGG I NIT+ ++ M V+ I+IS
Sbjct: 60 AIGSETSGGVYNVLAEHITLKNMGIGIHLKTNIGRGGIIRNITVSDVYMVNVRKGIKISA 119
Query: 237 GSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAP 296
DHPD+ ++P ALP ++ + NV +A ++ G+ + F +IC+ N++L G
Sbjct: 120 DVGDHPDKNYNPNALPVLKHVRIKNVWGKKVQQAGLIHGLKNSPFTDICLSNINLQGPII 179
Query: 297 SAK---WQCQFVSG 307
S + W+C +VSG
Sbjct: 180 STRNVPWKCSYVSG 193
>gi|109509132|gb|ABG34275.1| polygalacturonase [Eucalyptus globulus subsp. globulus]
Length = 238
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/218 (42%), Positives = 135/218 (61%), Gaps = 5/218 (2%)
Query: 116 TDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSG 175
TDG+DPDS TN IED +I SGDD VAVKSGWD YGI+ P+ +++RR++ +P +
Sbjct: 1 TDGVDPDSCTNTRIEDVHIVSGDDCVAVKSGWDEYGISYGMPTKQLVIRRLTCISPYSAM 60
Query: 176 VGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRIS 235
+ +GSEMSGGI +V + + + +G+RIKT GRGGY+++I +R +KM +K +
Sbjct: 61 IALGSEMSGGIEDVRAEDITAINTESGIRIKTAMGRGGYVKDIYVRGMKMHTMKWAFWMD 120
Query: 236 RGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLA 295
HPD +DPKA P I GI++ ++V+ N T L GI G F IC+ N ++ +A
Sbjct: 121 GNYGSHPDPHYDPKARPIITGINYRDIVAENVTMVAQLKGIPGNPFTGICISNATIT-MA 179
Query: 296 PSAK---WQCQFVSGFTSQVFPLPCPQLQNKSSSWCSF 330
P +K W C + G TS V P PC L ++++ C F
Sbjct: 180 PESKKEPWTCSDIHGITSGVTPQPCGMLPAETTT-CHF 216
>gi|238005826|gb|ACR33948.1| unknown [Zea mays]
Length = 256
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 79/118 (66%), Positives = 96/118 (81%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
WP+IDPLPSYGRGRE GGR++SLIHG L +V ITG NGTIDGQG +WWD+W RTL
Sbjct: 118 SWPLIDPLPSYGRGRELPGGRYMSLIHGHGLQDVFITGENGTIDGQGGVWWDMWKKRTLP 177
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGID 120
TR HL+ELM S ++++SNL F++SPFW IHPVYC NVVI +T+LAP ++PNTDGID
Sbjct: 178 FTRPHLLELMYSTDVVVSNLVFQDSPFWNIHPVYCSNVVIANLTVLAPHDSPNTDGID 235
>gi|442804408|ref|YP_007372557.1| polygalacturonase Pgl [Clostridium stercorarium subsp. stercorarium
DSM 8532]
gi|442740258|gb|AGC67947.1| polygalacturonase Pgl [Clostridium stercorarium subsp. stercorarium
DSM 8532]
Length = 430
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 97/232 (41%), Positives = 137/232 (59%), Gaps = 9/232 (3%)
Query: 1 MDEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRT 60
++++P++ Y R + LI+GD + NV ITG+ GT+DGQG+ WW L +
Sbjct: 75 IEDYPLV-----YSRWEGEEAEVYSPLIYGDKVENVSITGH-GTLDGQGEPWWRLQREKQ 128
Query: 61 LKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGID 120
LK+ R + S +LI + NSP WTI+PV C NVVI G+TI P ++PNTDGI+
Sbjct: 129 LKYPRPRFICFQESERVLIQGIKIINSPAWTINPVRCNNVVIDGITIKNPADSPNTDGIN 188
Query: 121 PDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGS 180
PDS NV I +CYI GDD VA+KSG ++ + P NI + + GV IGS
Sbjct: 189 PDSCRNVRITNCYISVGDDCVAIKSGVEYSKYRI--PCENITITNCT-MLDGHGGVVIGS 245
Query: 181 EMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPI 232
EMSG + N+T+ G+RIKT +GRGG +E+I + NI M++V P+
Sbjct: 246 EMSGCVRNITISNCVFEGTDRGIRIKTRRGRGGVVEDIRVSNIIMKKVMCPL 297
>gi|413941560|gb|AFW74209.1| hypothetical protein ZEAMMB73_002485 [Zea mays]
gi|413941561|gb|AFW74210.1| hypothetical protein ZEAMMB73_002485 [Zea mays]
Length = 280
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 75/100 (75%), Positives = 89/100 (89%)
Query: 2 DEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTL 61
+EWP+I PLPSYGRGRERLG RHISLIHG+ L +V+ITG NGTIDGQG MWW+LW NRTL
Sbjct: 161 EEWPLITPLPSYGRGRERLGPRHISLIHGEGLNDVVITGSNGTIDGQGHMWWELWRNRTL 220
Query: 62 KHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVV 101
HTRGHL+EL+NS N+LIS++T NSPFWT+HPVYCR+V+
Sbjct: 221 NHTRGHLIELVNSTNVLISSVTLSNSPFWTVHPVYCRSVL 260
>gi|59044763|gb|AAW84064.1| pectate lyase [uncultured bacterium]
Length = 466
Score = 170 bits (431), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 108/291 (37%), Positives = 156/291 (53%), Gaps = 29/291 (9%)
Query: 16 GRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKHTRGHLVELMNSN 75
G+E L H I+G+ L V ITG GTIDG+G+ WW L+ + H R L+
Sbjct: 88 GKEVLTYAH--QIYGEDLEGVAITG-RGTIDGRGETWWRLFRAKAFTHPRPRLIAFTRCK 144
Query: 76 NILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIE 135
+ILI +T NSP WTI+PV C V I +TI+ P ++PNTDGIDPDSS NV I +CYI+
Sbjct: 145 DILIEGVTLVNSPAWTINPVMCERVTIDKVTIINPPDSPNTDGIDPDSSRNVYITNCYID 204
Query: 136 SGDDLVAVKSGWDHYGIAMAR-PSSNIIV-----RRVSGTTPTCSGVGIGSEMSGGIFNV 189
GDD +A+K+G + ++ R P NI++ R G GV IGSE SGGI V
Sbjct: 205 VGDDCIAIKAGRED---SLYRTPCENIVIANCLMRHGHG------GVVIGSETSGGIRKV 255
Query: 190 TVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISR------GSNDHPD 243
+ D G+R+K+ +GRGG++E++ NI ME+V P ++ G D
Sbjct: 256 VITNCIFEDTDRGIRLKSRRGRGGFVEDLRATNIIMEKVLCPFVLNMYYDTGGGVIDERA 315
Query: 244 EGWDP----KALPKIRGISFVNVVSVNT-TKAPVLAGIIGTQFEEICMKNV 289
+P +A P R +SF ++ + A L G+ E++ ++
Sbjct: 316 HDLEPHPVSEATPSFRRLSFSHITAREVQAAAAFLYGLPEQPLEDVLFDDI 366
>gi|403744854|ref|ZP_10953930.1| glycoside hydrolase family 28 [Alicyclobacillus hesperidum
URH17-3-68]
gi|403121782|gb|EJY56052.1| glycoside hydrolase family 28 [Alicyclobacillus hesperidum
URH17-3-68]
Length = 865
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 112/306 (36%), Positives = 156/306 (50%), Gaps = 40/306 (13%)
Query: 23 RHISLIHGDHLTNVIITGYNGTIDGQGQM--------WWDLWWNRTLK------------ 62
R++SLI GD++ NV ITG G IDG G+ + WW++ K
Sbjct: 215 RYMSLITGDNVRNVTITG-EGVIDGNGETPIHDNAGNTYGNWWSKQYKEPLSDPAVSLVQ 273
Query: 63 ---------HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNA 113
+ R L+E ++S NILI +T +NSP WTIHPVYC +V + + I+ P +
Sbjct: 274 SPNYSQGLPYARPSLIEFLHSQNILIQGVTVQNSPSWTIHPVYCDHVTLADVHIVNPPTS 333
Query: 114 PNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTC 173
NTDG+DPDS + I D GDD +A+KSG D G + PS NI+VR
Sbjct: 334 DNTDGVDPDSVNGMQIIDDTFSVGDDDIAIKSGKDAEGRRIGIPSQNIVVRNCH--MLNG 391
Query: 174 SGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIR 233
GV IGSEMSGG+ NV V+ AG+RIKT +GRGG ++NIT ++ M ++
Sbjct: 392 HGVSIGSEMSGGVQNVLVENCDFDGTNAGLRIKTLRGRGGIVQNITFDHVSMSNIQAQAF 451
Query: 234 I------SRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMK 287
I S GS P D A P IR ++F N+ +A +G+ + I
Sbjct: 452 IIDENYASNGSALPPGPVTD--ATPAIRNLNFDNITVNGAKQAMYFSGLAELPIQNIAFH 509
Query: 288 NVSLLG 293
NV++ G
Sbjct: 510 NVAING 515
>gi|218187051|gb|EEC69478.1| hypothetical protein OsI_38684 [Oryza sativa Indica Group]
Length = 365
Score = 167 bits (422), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 96/259 (37%), Positives = 146/259 (56%), Gaps = 3/259 (1%)
Query: 67 HLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPN-TDGIDPDSST 125
HL + + ++I P P Y + + + G + +N N TD + DS +
Sbjct: 87 HLTIFLEKDAVIIGAKEVSEWPIVEPLPSYGQGIDLPGARHRSLINGHNVTDVVITDSCS 146
Query: 126 NVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGG 185
N+CIED I D +++KSGWD+YGI + RP+S+I + RV + + GSEMSGG
Sbjct: 147 NMCIEDSSISVAHDAISLKSGWDNYGITIGRPASDIHISRVDLQASLGAALAFGSEMSGG 206
Query: 186 IFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPDEG 245
I ++ VD L++ ++ G+ KT GRGGYI ++ I +++ME V + I+ + + HPD
Sbjct: 207 ISDIHVDHLNIHGSSRGILFKTAPGRGGYIRDVVISDVQMEDVNVAIKFTGDWSTHPDNH 266
Query: 246 WDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV--SLLGLAPSAKWQCQ 303
+DP ALP I I+ N+V N + A VL+GI G F IC+ N+ SL S+ W C
Sbjct: 267 FDPSALPMINRITLKNMVGTNISVAGVLSGINGDPFTNICLSNISFSLADSTQSSSWSCS 326
Query: 304 FVSGFTSQVFPLPCPQLQN 322
+SG++ VFP PCP L +
Sbjct: 327 NISGYSELVFPEPCPDLHH 345
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 32/39 (82%)
Query: 1 MDEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIIT 39
+ EWPI++PLPSYG+G + G RH SLI+G ++T+V+IT
Sbjct: 104 VSEWPIVEPLPSYGQGIDLPGARHRSLINGHNVTDVVIT 142
>gi|448413184|ref|ZP_21577030.1| glycoside hydrolase family 28 [Halosimplex carlsbadense 2-9-1]
gi|445667365|gb|ELZ20009.1| glycoside hydrolase family 28 [Halosimplex carlsbadense 2-9-1]
Length = 515
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/286 (36%), Positives = 143/286 (50%), Gaps = 33/286 (11%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWW-------------------------NRTLKHTRGHLV 69
NV ITG GT+DGQG WW + + + R L
Sbjct: 104 NVEITG-RGTVDGQGDYWWQFYGVDDDELPASLADRLDSFHEANDKADDVSSFTLRPPLF 162
Query: 70 ELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCI 129
++ S N+ +S +T RNSPFW H VY NV + + + P +APN DGID DSS V I
Sbjct: 163 QVDRSTNVSVSGITLRNSPFWNTHVVYSDNVTLHDVNVENPADAPNGDGIDIDSSRYVRI 222
Query: 130 EDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNV 189
DCY+ +GDD V +KSG D G + RP+S I V + GV IGSEMSG + +V
Sbjct: 223 SDCYLNAGDDAVCIKSGKDEEGRRIGRPASGITVTNCT-VEAGHGGVVIGSEMSGDVRDV 281
Query: 190 TVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDP- 248
TV D G+RIKT +GRGG +E+ N+ M RV P I+ D DP
Sbjct: 282 TVSNCTFTDTDRGIRIKTQRGRGGVVEDCRFDNLVMRRVACPFTIN--GYYFMDIDSDPI 339
Query: 249 ---KALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 291
++ P +R I++ ++++ + A AG+ +FE I NV +
Sbjct: 340 PVDESTPMVRNIAYSDIIARDVETAGFFAGLPEQRFENISFSNVEI 385
>gi|345513230|ref|ZP_08792752.1| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
gi|345456240|gb|EEO47229.2| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
Length = 955
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/239 (38%), Positives = 134/239 (56%), Gaps = 30/239 (12%)
Query: 15 RGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLW-------WNRTLKH---- 63
G E G H +I+ H TN+ ITG GTID QG + W NR K
Sbjct: 620 EGTELYG--HSPMIYAKHATNIAITG-QGTIDAQGGREFASWSQIEVSDRNRLRKMGEKL 676
Query: 64 -------------TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAP 110
R ++ M + IL+ +T +NSPFWTIHPVYC NV+++ +TI +
Sbjct: 677 IPVTERIFGKGTILRPSCIQFMGCSRILVEGITIKNSPFWTIHPVYCDNVIVRSITIDS- 735
Query: 111 LNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTT 170
+ PN DG DP+S++NV IE+C +GDD +A+K+G D G + RPS NI++R +
Sbjct: 736 -HYPNNDGCDPESTSNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRNCLFQS 794
Query: 171 PTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVK 229
C+G+ IGSEMSGG+ N+ +D + + + K+++ RGGYI NI + NI +ER K
Sbjct: 795 -ECNGLCIGSEMSGGVENIYMDNIQIGTVKNALYFKSNRDRGGYIRNIQVSNITIERSK 852
>gi|212693830|ref|ZP_03301958.1| hypothetical protein BACDOR_03351 [Bacteroides dorei DSM 17855]
gi|212663719|gb|EEB24293.1| glycosyl hydrolase, family 43 [Bacteroides dorei DSM 17855]
Length = 957
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/239 (38%), Positives = 134/239 (56%), Gaps = 30/239 (12%)
Query: 15 RGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLW-------WNRTLKH---- 63
G E G H +I+ H TN+ ITG GTID QG + W NR K
Sbjct: 622 EGTELYG--HSPMIYAKHATNIAITG-QGTIDAQGGREFASWSQIEVSDRNRLRKMGEKL 678
Query: 64 -------------TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAP 110
R ++ M + IL+ +T +NSPFWTIHPVYC NV+++ +TI +
Sbjct: 679 IPVTERIFGKGTILRPSCIQFMGCSRILVEGITIKNSPFWTIHPVYCDNVIVRSITIDS- 737
Query: 111 LNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTT 170
+ PN DG DP+S++NV IE+C +GDD +A+K+G D G + RPS NI++R +
Sbjct: 738 -HYPNNDGCDPESTSNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRNCLFQS 796
Query: 171 PTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVK 229
C+G+ IGSEMSGG+ N+ +D + + + K+++ RGGYI NI + NI +ER K
Sbjct: 797 -ECNGLCIGSEMSGGVENIYMDNIQIGTVKNALYFKSNRDRGGYIRNIQVSNITIERSK 854
>gi|265755035|ref|ZP_06089949.1| beta-xylosidase [Bacteroides sp. 3_1_33FAA]
gi|263234646|gb|EEZ20225.1| beta-xylosidase [Bacteroides sp. 3_1_33FAA]
Length = 955
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/239 (38%), Positives = 134/239 (56%), Gaps = 30/239 (12%)
Query: 15 RGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLW-------WNRTLKH---- 63
G E G H +I+ H TN+ ITG GTID QG + W NR K
Sbjct: 620 EGTELYG--HSPMIYAKHATNIAITG-QGTIDAQGGREFASWSQIEVSDRNRLRKMGEKL 676
Query: 64 -------------TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAP 110
R ++ M + IL+ +T +NSPFWTIHPVYC NV+++ +TI +
Sbjct: 677 IPVTERIFGKGTILRPSCIQFMGCSRILVEGITIKNSPFWTIHPVYCDNVIVRSITIDS- 735
Query: 111 LNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTT 170
+ PN DG DP+S++NV IE+C +GDD +A+K+G D G + RPS NI++R +
Sbjct: 736 -HYPNNDGCDPESTSNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRNCLFQS 794
Query: 171 PTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVK 229
C+G+ IGSEMSGG+ N+ +D + + + K+++ RGGYI NI + NI +ER K
Sbjct: 795 -ECNGLCIGSEMSGGVENIYMDNIQIGTVKNALYFKSNRDRGGYIRNIQVSNITIERSK 852
>gi|237709360|ref|ZP_04539841.1| beta-xylosidase [Bacteroides sp. 9_1_42FAA]
gi|229456745|gb|EEO62466.1| beta-xylosidase [Bacteroides sp. 9_1_42FAA]
Length = 938
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/239 (38%), Positives = 134/239 (56%), Gaps = 30/239 (12%)
Query: 15 RGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLW-------WNRTLKH---- 63
G E G H +I+ H TN+ ITG GTID QG + W NR K
Sbjct: 603 EGTELYG--HSPMIYAKHATNIAITG-QGTIDAQGGREFASWSQIEVSDRNRLRKMGEKL 659
Query: 64 -------------TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAP 110
R ++ M + IL+ +T +NSPFWTIHPVYC NV+++ +TI +
Sbjct: 660 IPVTERIFGKGTILRPSCIQFMGCSRILVEGITIKNSPFWTIHPVYCDNVIVRSITIDS- 718
Query: 111 LNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTT 170
+ PN DG DP+S++NV IE+C +GDD +A+K+G D G + RPS NI++R +
Sbjct: 719 -HYPNNDGCDPESTSNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRNCLFQS 777
Query: 171 PTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVK 229
C+G+ IGSEMSGG+ N+ +D + + + K+++ RGGYI NI + NI +ER K
Sbjct: 778 -ECNGLCIGSEMSGGVENIYMDNIQIGTVKNALYFKSNRDRGGYIRNIQVSNITIERSK 835
>gi|423232721|ref|ZP_17219121.1| hypothetical protein HMPREF1063_04941 [Bacteroides dorei
CL02T00C15]
gi|423247413|ref|ZP_17228463.1| hypothetical protein HMPREF1064_04669 [Bacteroides dorei
CL02T12C06]
gi|392623160|gb|EIY17265.1| hypothetical protein HMPREF1063_04941 [Bacteroides dorei
CL02T00C15]
gi|392632553|gb|EIY26512.1| hypothetical protein HMPREF1064_04669 [Bacteroides dorei
CL02T12C06]
Length = 955
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/239 (38%), Positives = 134/239 (56%), Gaps = 30/239 (12%)
Query: 15 RGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLW-------WNRTLKH---- 63
G E G H +I+ H TN+ ITG GTID QG + W NR K
Sbjct: 620 EGTELYG--HSPMIYAKHATNIAITG-QGTIDAQGGREFASWSQIEVSDRNRLRKMGEKL 676
Query: 64 -------------TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAP 110
R ++ M + IL+ +T +NSPFWTIHPVYC NV+++ +TI +
Sbjct: 677 IPVTERIFGKGTILRPSCIQFMGCSRILVEGITIKNSPFWTIHPVYCDNVIVRSITIDS- 735
Query: 111 LNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTT 170
+ PN DG DP+S++NV IE+C +GDD +A+K+G D G + RPS NI++R +
Sbjct: 736 -HYPNNDGCDPESTSNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRNCLFQS 794
Query: 171 PTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVK 229
C+G+ IGSEMSGG+ N+ +D + + + K+++ RGGYI NI + NI +ER K
Sbjct: 795 -ECNGLCIGSEMSGGVENIYMDNIQIGTVKNALYFKSNRDRGGYIRNIQVSNITIERSK 852
>gi|423242205|ref|ZP_17223315.1| hypothetical protein HMPREF1065_03938 [Bacteroides dorei
CL03T12C01]
gi|392639949|gb|EIY33757.1| hypothetical protein HMPREF1065_03938 [Bacteroides dorei
CL03T12C01]
Length = 955
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/239 (38%), Positives = 134/239 (56%), Gaps = 30/239 (12%)
Query: 15 RGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLW-------WNRTLKH---- 63
G E G H +I+ H TN+ ITG GTID QG + W NR K
Sbjct: 620 EGTELYG--HSPMIYAKHATNIAITG-QGTIDAQGGREFASWSQIEVSDRNRLRKMGEKL 676
Query: 64 -------------TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAP 110
R ++ M + IL+ +T +NSPFWTIHPVYC NV+++ +TI +
Sbjct: 677 IPVTERIFGKGTILRPSCIQFMGCSRILVEGITIKNSPFWTIHPVYCDNVIVRSITIDS- 735
Query: 111 LNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTT 170
+ PN DG DP+S++NV IE+C +GDD +A+K+G D G + RPS NI++R +
Sbjct: 736 -HYPNNDGCDPESTSNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRNCLFQS 794
Query: 171 PTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVK 229
C+G+ IGSEMSGG+ N+ +D + + + K+++ RGGYI NI + NI +ER K
Sbjct: 795 -ECNGLCIGSEMSGGVENIYMDNIQIGTVKNALYFKSNRDRGGYIRNIQVSNITIERSK 852
>gi|448373202|ref|ZP_21557548.1| glycoside hydrolase family 28 [Natrialba aegyptia DSM 13077]
gi|445644701|gb|ELY97713.1| glycoside hydrolase family 28 [Natrialba aegyptia DSM 13077]
Length = 544
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/289 (35%), Positives = 141/289 (48%), Gaps = 31/289 (10%)
Query: 31 DHLTNVIITGYNGTIDGQGQMWWDLWWN--------------------------RTLKHT 64
D V ITG GTIDG G+ WW + + H
Sbjct: 123 DGADTVSITG-RGTIDGNGEYWWQFYGEPESTLPDGLQDRLAEFEAQNDKQDDVSSFTH- 180
Query: 65 RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSS 124
R L+++ ++ N+ +S +T RNSPFW H VY NV I + I P +APN DGID DSS
Sbjct: 181 RPPLLQVFDAENVTVSGVTLRNSPFWNTHVVYSENVTITDVNIENPADAPNGDGIDIDSS 240
Query: 125 TNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSG 184
V I D YI +GDD + +KSG D G + P+S I V + GV IGSEMSG
Sbjct: 241 RYVRISDAYINAGDDAICIKSGKDAEGREVGEPASQITVTNCT-VEAGHGGVVIGSEMSG 299
Query: 185 GIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPDE 244
+ +VTV D G+RIKT +GRGG +E++ I M R+ P I+ D
Sbjct: 300 DVRDVTVTNCTFTDTDRGIRIKTQRGRGGVVEDLRFDQIVMRRIACPFVINGYYFTPLDS 359
Query: 245 GWDP--KALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 291
+P + P +R +SF N+ + N A AG+ FE I ++V +
Sbjct: 360 DPEPIDEGTPLVRNVSFSNITARNVETAGFFAGLPERYFEGISFRDVRI 408
>gi|357051036|ref|ZP_09112232.1| hypothetical protein HMPREF9478_02215 [Enterococcus saccharolyticus
30_1]
gi|355380661|gb|EHG27797.1| hypothetical protein HMPREF9478_02215 [Enterococcus saccharolyticus
30_1]
Length = 437
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 104/312 (33%), Positives = 159/312 (50%), Gaps = 20/312 (6%)
Query: 24 HISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWN--RTLKHTRGHLVELMNSNNILISN 81
+ S I+ D N+ ITG+ GTIDGQGQ WWD++ N L++ R L+ + I + +
Sbjct: 87 YASCIYADGAENIAITGF-GTIDGQGQKWWDVFRNHPEQLEYPRPKLISFDSCQQITLRD 145
Query: 82 LTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLV 141
++ NSP WT++P+ C+++ + + I P ++PNTDGIDP+S NV I +C I+ GDD +
Sbjct: 146 VSLVNSPSWTVNPILCQDITVDNIKIKNPADSPNTDGIDPESCKNVRISNCLIDVGDDCI 205
Query: 142 AVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAA 201
A+KSG + R S I GV +GSEMSG I NVT+ D
Sbjct: 206 AIKSGTEE---TKERVSCENITISNCQMLHGHGGVVLGSEMSGDIRNVTISNCIFQDTDR 262
Query: 202 GVRIKTDKGRGGYIENITIRNIKMERVKIPIRISR----GSNDHPDEGWDP------KAL 251
G+R+K+ +GRGG IE+I + N+ M+ V P ++ G WD +
Sbjct: 263 GIRLKSRRGRGGVIEDIRVNNLIMDNVICPFTLNLYYFCGPKGKEKYVWDKNPYPISEET 322
Query: 252 PKIRGISFVNVVSVNTTKAPVLAGIIGTQF-EEICMKNVSLLGLAPSAKWQCQFVSG--- 307
P+ R I FVN+ + N A + QF +I V++ + ++G
Sbjct: 323 PQFRRIHFVNISARNVHAAAGFIYGLSEQFISDISFHEVAISMAKEPIPGKPAMMTGMEE 382
Query: 308 FTSQVFPLPCPQ 319
TSQ F + C +
Sbjct: 383 MTSQGFYIGCAK 394
>gi|257869845|ref|ZP_05649498.1| galacturan 1,4-alpha-galacturonidase [Enterococcus gallinarum EG2]
gi|257804009|gb|EEV32831.1| galacturan 1,4-alpha-galacturonidase [Enterococcus gallinarum EG2]
Length = 437
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 104/312 (33%), Positives = 159/312 (50%), Gaps = 20/312 (6%)
Query: 24 HISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWN--RTLKHTRGHLVELMNSNNILISN 81
+ S I+ D N+ ITG+ GTIDGQGQ WWD++ N L++ R L+ + I + +
Sbjct: 87 YASCIYADGAENIAITGF-GTIDGQGQKWWDVFRNHPEQLEYPRPKLISFDSCQQITLRD 145
Query: 82 LTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLV 141
++ NSP WT++P+ C+++ + + I P ++PNTDGIDP+S NV I +C I+ GDD +
Sbjct: 146 VSLVNSPSWTVNPILCQDITVDNIKIKNPADSPNTDGIDPESCKNVRISNCLIDVGDDCI 205
Query: 142 AVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAA 201
A+KSG + R S I GV +GSEMSG I NVT+ D
Sbjct: 206 AIKSGTEE---TKERVSCENITISNCQMLHGHGGVVLGSEMSGDIRNVTISNCIFQDTDR 262
Query: 202 GVRIKTDKGRGGYIENITIRNIKMERVKIPIRISR----GSNDHPDEGWDP------KAL 251
G+R+K+ +GRGG IE+I + N+ M+ V P ++ G WD +
Sbjct: 263 GIRLKSRRGRGGIIEDIRVNNLIMDNVICPFTLNLYYFCGPKGKEKYVWDKNPYPISEET 322
Query: 252 PKIRGISFVNVVSVNTTKAPVLAGIIGTQF-EEICMKNVSLLGLAPSAKWQCQFVSG--- 307
P+ R I FVN+ + N A + QF +I V++ + ++G
Sbjct: 323 PQFRRIHFVNISARNVHAAAGFIYGLSEQFISDISFHEVAISMAKEPIPGKPAMMTGMEE 382
Query: 308 FTSQVFPLPCPQ 319
TSQ F + C +
Sbjct: 383 MTSQGFYIGCAK 394
>gi|448360766|ref|ZP_21549393.1| glycoside hydrolase family 28 [Natrialba asiatica DSM 12278]
gi|445652552|gb|ELZ05438.1| glycoside hydrolase family 28 [Natrialba asiatica DSM 12278]
Length = 522
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 103/289 (35%), Positives = 140/289 (48%), Gaps = 31/289 (10%)
Query: 31 DHLTNVIITGYNGTIDGQGQMWWDLWWN--------------------------RTLKHT 64
D V ITG GTIDG G+ WW + + H
Sbjct: 101 DGADTVSITG-RGTIDGNGEYWWQFYGEPESTLPDGLQDRLAEFEAQNDKQDDVSSFTH- 158
Query: 65 RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSS 124
R L+++ ++ N+ +S +T RNSPFW H VY NV I + I P APN DGID DSS
Sbjct: 159 RPPLLQVFDAENVTVSGVTLRNSPFWNTHVVYSENVTITDVNIENPAGAPNGDGIDIDSS 218
Query: 125 TNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSG 184
V I D YI +GDD + +KSG D G + P+S I V + GV IGSEMSG
Sbjct: 219 RYVRISDAYINAGDDAICIKSGKDAEGREVGEPASQITVTNCT-VEAGHGGVVIGSEMSG 277
Query: 185 GIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPDE 244
+ +VTV D G+RIKT +GRGG +E++ I M R+ P I+ D
Sbjct: 278 DVRDVTVTNCTFTDTDRGIRIKTQRGRGGVVEDLRFDQIVMRRIACPFVINGYYFTPLDS 337
Query: 245 GWDP--KALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 291
+P + P +R +SF N+ + N A AG+ FE I ++V +
Sbjct: 338 DPEPIDEGTPLVRNVSFSNITARNVETAGFFAGLPERYFEGISFRDVRI 386
>gi|395803596|ref|ZP_10482840.1| glycoside hydrolase [Flavobacterium sp. F52]
gi|395434150|gb|EJG00100.1| glycoside hydrolase [Flavobacterium sp. F52]
Length = 522
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 103/305 (33%), Positives = 152/305 (49%), Gaps = 45/305 (14%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDL------------------------------- 55
L + + N+ ITG G IDGQG+ WW+
Sbjct: 113 LFYAKDVENIAITG-RGIIDGQGKAWWNEVYRIETAKEPLPPTKYQTMWEEQNKGLYTEP 171
Query: 56 WWNRTL--KHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNA 113
++ RT+ K R + N NILI +TF+NSPFWTI+P +C NV + G++I P ++
Sbjct: 172 YYKRTVDKKFFRPSFFQAYNCKNILIEGVTFKNSPFWTINPEFCDNVRVTGISIFNP-HS 230
Query: 114 PNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTC 173
PNTDGI+P S TNV I DC+I GDD + +KSG D G + + N+ + + +
Sbjct: 231 PNTDGINPSSCTNVHISDCHISVGDDCITIKSGRDGDGRKYGKATENVTITNCTMLSGH- 289
Query: 174 SGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIE-----NITIRNIKMERV 228
GV IGSEMSGGI +T+ G+RIK+ +GRGG +E NI ++NIK E +
Sbjct: 290 GGVVIGSEMSGGIKKITISNCVFDGTDRGIRIKSARGRGGVVEDIRVDNIVMKNIKEEAI 349
Query: 229 KIPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKN 288
+ + +G+ P + P R I N+ + N KA + GI + I N
Sbjct: 350 VLSLFYDKGTTVEP----VTEKTPIFRNIHMSNITASNVNKAGQILGITEMPIQNITFSN 405
Query: 289 VSLLG 293
+++ G
Sbjct: 406 INMDG 410
>gi|379727941|ref|YP_005320126.1| polygalacturonase [Melissococcus plutonius DAT561]
gi|376318844|dbj|BAL62631.1| polygalacturonase [Melissococcus plutonius DAT561]
Length = 442
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 103/266 (38%), Positives = 144/266 (54%), Gaps = 18/266 (6%)
Query: 24 HISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWN--RTLKHTRGHLVELMNSNNILISN 81
++ I+G +LTNVI+TG +GT+DGQG WW L L + R +L+ S+ I IS+
Sbjct: 92 YMPCIYGKNLTNVILTG-SGTLDGQGTNWWKLHRETPEKLAYPRPYLIGFDYSSRITISD 150
Query: 82 LTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLV 141
L SP WT+HP+ C +V I+ ++IL P ++PNTDGIDP+S N+ I +C I+ GDD +
Sbjct: 151 LNLTMSPSWTVHPMECYDVTIQNISILNPADSPNTDGIDPESCKNLRILNCNIDVGDDCI 210
Query: 142 AVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAA 201
A+KSG + + + NI + + V +GSEMSG I NVT+
Sbjct: 211 AIKSGTEQTTTSKS-ACENITISNCT-MVHGHGAVVLGSEMSGNIRNVTISNCVFQQTDR 268
Query: 202 GVRIKTDKGRGGYIENITIRNIKMERVKIPIRISR----GSNDHPDEGWDP------KAL 251
G+R+KT +GRGG +ENIT+ I ME V P I+ G WD K
Sbjct: 269 GIRMKTRRGRGGVVENITVSTIVMEDVLCPFVINAYYFCGPKGKEKYVWDKNPYPITKET 328
Query: 252 PKIRGISFVNVVSVNTTKAPVLAGII 277
P R I F N+V+ K AG I
Sbjct: 329 PCFRSIHFSNIVA---KKVRAAAGFI 351
>gi|448349773|ref|ZP_21538602.1| glycoside hydrolase family 28 [Natrialba taiwanensis DSM 12281]
gi|445639084|gb|ELY92202.1| glycoside hydrolase family 28 [Natrialba taiwanensis DSM 12281]
Length = 522
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 102/289 (35%), Positives = 139/289 (48%), Gaps = 31/289 (10%)
Query: 31 DHLTNVIITGYNGTIDGQGQMWWDLWWN--------------------------RTLKHT 64
D V ITG G IDG G+ WW + + H
Sbjct: 101 DGTDTVSITG-QGAIDGNGEYWWQFYGEPEPMLPDGLQDRLAEFEAQNDKQDDVSSFTH- 158
Query: 65 RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSS 124
R L+++ ++ N+ +S +T RNSPFW H VY NV I + I P APN DGID DSS
Sbjct: 159 RPPLLQIFDAENVTVSGVTLRNSPFWNTHVVYSENVTITDVNIENPAGAPNGDGIDIDSS 218
Query: 125 TNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSG 184
V I D YI +GDD + +KSG D G + P+S I V + GV IGSEMSG
Sbjct: 219 RYVRISDAYINAGDDAICIKSGKDAEGREVGEPASQITVANCT-VEAGHGGVVIGSEMSG 277
Query: 185 GIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPDE 244
+ +VTV D G+RIKT +GRGG +E++ I M R+ P I+ D
Sbjct: 278 DVRDVTVSNCTFTDTDRGIRIKTQRGRGGVVEDLRFDQIVMRRIACPFVINGYYFTPLDS 337
Query: 245 GWDP--KALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 291
+P + P +R +SF N+ + N A AG+ FE I ++V +
Sbjct: 338 DPEPTGEGTPLVRNVSFSNITARNVETAGFFAGLPERYFEGISFRDVRI 386
>gi|393201099|ref|YP_006462941.1| endopolygalacturonase [Solibacillus silvestris StLB046]
gi|327440430|dbj|BAK16795.1| endopolygalacturonase [Solibacillus silvestris StLB046]
Length = 449
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 100/279 (35%), Positives = 146/279 (52%), Gaps = 15/279 (5%)
Query: 24 HISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKHTRGHLVELMNSNNILISNLT 83
++S I+ H N+ ITG+ GT++GQG WW L+ +L + R +LV + + I +
Sbjct: 95 YMSCIYACHAENIAITGF-GTLNGQGAYWWKLFKEDSLAYPRPNLVSFDHCERVHIEQVK 153
Query: 84 FRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAV 143
+SP WT+HP C NV I G++I+ P N+PNTDGI+P+S NV I DC I+ GDD +A+
Sbjct: 154 MIDSPSWTVHPNDCDNVTISGVSIVNPANSPNTDGINPESCRNVKISDCSIDVGDDCIAI 213
Query: 144 KSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGV 203
K+G + A+ P NI + + GV GSEMSG I NV V G+
Sbjct: 214 KAGTEDAERAI--PCENITITNCT-MLHGHGGVVFGSEMSGDIRNVVVSNCIFEGTDRGI 270
Query: 204 RIKTDKGRGGYIENITIRNIKMERVKIPIRIS----RGSNDHPDEGWDPKA------LPK 253
R K+ +GRGG IENI + NI M V P ++ G WD + PK
Sbjct: 271 RFKSRRGRGGTIENIRVNNIVMNNVICPFILNLYYYHGPRGMEPYVWDKEVQPVTALTPK 330
Query: 254 IRGISFVNVVSVNTTKAP-VLAGIIGTQFEEICMKNVSL 291
R I F N+ + + T A + G+ E+I ++ +
Sbjct: 331 FRHIHFSNITATDVTAAAGFMYGLPEMPVEDITFSHIRI 369
>gi|332685997|ref|YP_004455771.1| polygalacturonase [Melissococcus plutonius ATCC 35311]
gi|332370006|dbj|BAK20962.1| polygalacturonase [Melissococcus plutonius ATCC 35311]
Length = 442
Score = 160 bits (405), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 107/308 (34%), Positives = 160/308 (51%), Gaps = 29/308 (9%)
Query: 1 MDEWPIIDPLPSYGRGRERLGG----RHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLW 56
++++PI+D RL G ++ I+G +LTNVI+TG +GT+DGQG WW L
Sbjct: 74 VEQFPIVD---------SRLEGVKSKAYMPCIYGKNLTNVILTG-SGTLDGQGTNWWKLH 123
Query: 57 WN--RTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAP 114
L + R +L+ S+ I IS+L SP WT+HP+ C +V I+ ++IL P ++P
Sbjct: 124 RETPEKLAYPRPYLIGFDYSSRITISDLNLTMSPSWTVHPMECYDVTIQNISILNPADSP 183
Query: 115 NTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCS 174
NTDGIDP+S N+ I +C I+ GDD +A+KSG + + + NI + +
Sbjct: 184 NTDGIDPESCKNLRILNCNIDVGDDCIAIKSGTEQTTTSKS-ACENITISNCT-MVHGHG 241
Query: 175 GVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRI 234
V +GSEMS I NVT+ G+R+KT +GRGG +ENIT+ I ME V P I
Sbjct: 242 AVVLGSEMSRNIRNVTISNCVFQQTDRGIRMKTRRGRGGVVENITVSTIVMEDVLCPFVI 301
Query: 235 SR----GSNDHPDEGWDP------KALPKIRGISFVNVVSVNTTKAP-VLAGIIGTQFEE 283
+ G WD K P R I F N+V+ A + G+ ++
Sbjct: 302 NAYYFCGPKGKEKYVWDKNPYPITKETPCFRSIHFSNIVAKKVRAAEGFIYGLPEMPVQD 361
Query: 284 ICMKNVSL 291
+ N+ +
Sbjct: 362 VSFTNIQI 369
>gi|146301824|ref|YP_001196415.1| glycoside hydrolase [Flavobacterium johnsoniae UW101]
gi|146156242|gb|ABQ07096.1| Polygalacturonase-like protein; Glycoside hydrolase family 28
[Flavobacterium johnsoniae UW101]
Length = 522
Score = 160 bits (405), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 102/305 (33%), Positives = 152/305 (49%), Gaps = 45/305 (14%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDL------------------------------- 55
L + + N+ ITG G IDGQG+ WW+
Sbjct: 113 LFYAKDVQNITITG-RGVIDGQGKAWWNEVYRIETAKEPLPPTKYQTMWEEQNKGLYTEP 171
Query: 56 WWNRTL--KHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNA 113
++ RT+ K R + N NILI +TF+NSPFWTI+P +C NV + G++I P ++
Sbjct: 172 YYKRTVDKKFFRPSFFQAYNCKNILIEGVTFQNSPFWTINPEFCDNVTVTGISIFNP-HS 230
Query: 114 PNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTC 173
PNTDGI+P S TNV I +C+I GDD + +KSG D G + + N+ + + +
Sbjct: 231 PNTDGINPSSCTNVHISNCHISVGDDCITIKSGRDGDGRKYGKATENVTITNCTMLSGH- 289
Query: 174 SGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIE-----NITIRNIKMERV 228
GV IGSEMSGGI +T+ G+RIK+ +GRGG +E NI ++NIK E +
Sbjct: 290 GGVVIGSEMSGGIKKITISNCVFDGTDRGIRIKSARGRGGVVEDIRVDNIVMKNIKEEAI 349
Query: 229 KIPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKN 288
+ + +G+ P + P R I N+ + N KA + GI + I N
Sbjct: 350 VLSLFYDKGTQVEP----VTEKTPIFRNIHMSNITASNVNKAGQILGITEMPIQNITFSN 405
Query: 289 VSLLG 293
+++ G
Sbjct: 406 INMDG 410
>gi|146295422|ref|YP_001179193.1| galacturan 1,4-alpha-galacturonidase [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145408998|gb|ABP66002.1| Galacturan 1,4-alpha-galacturonidase [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 447
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/302 (33%), Positives = 150/302 (49%), Gaps = 20/302 (6%)
Query: 1 MDEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRT 60
+D++P++ Y R + LI+ ++ N+ + G+ GTIDGQG+MWW L N+
Sbjct: 71 LDDFPLV-----YTRWEGEEQEAYSPLIYAENAENIAVVGF-GTIDGQGEMWWKLHRNKE 124
Query: 61 LKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGID 120
LK+ R V N+ I + NSP WT++P+ C NV + + I P ++PNTDGI+
Sbjct: 125 LKYPRPRTVCFYRCKNVTIEGIKIVNSPSWTVNPIECENVTVHNVKIQNPYDSPNTDGIN 184
Query: 121 PDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGS 180
P+S V I +CYI+ GDD V +KSG + + + P NI + G+ IGS
Sbjct: 185 PESCEGVRISNCYIDVGDDCVTLKSGTEDCKVRI--PCENIAITNCI-MAHGHGGIVIGS 241
Query: 181 EMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISR---- 236
EMSGG+ NV + G+RIKT +GRGG +E+I + NI M+ V P
Sbjct: 242 EMSGGVRNVVISNCIFEGTDRGIRIKTRRGRGGIVEDIRVSNIVMKNVICPFAFYMYYHC 301
Query: 237 GSNDHPDEGWDPKALPK------IRGISFVNVVSVNTTKAP-VLAGIIGTQFEEICMKNV 289
G WD P +R I +V+ A L G+ E++ NV
Sbjct: 302 GKGGKEKRVWDKSPYPVDSTTPIVRRIYISDVIVRQARAAAGFLYGLTEMPIEDVVFSNV 361
Query: 290 SL 291
++
Sbjct: 362 TV 363
>gi|284172853|ref|YP_003406235.1| glycoside hydrolase family 28 [Haloterrigena turkmenica DSM 5511]
gi|284017613|gb|ADB63562.1| glycoside hydrolase family 28 [Haloterrigena turkmenica DSM 5511]
Length = 541
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/298 (35%), Positives = 140/298 (46%), Gaps = 39/298 (13%)
Query: 31 DHLTNVIITGYNGTIDGQGQMWWDLW------------------WNRTLKHT-------R 65
D NV ITG GTIDG G+ WW + + K R
Sbjct: 126 DDAENVSITG-RGTIDGGGEYWWQFYDAPESEIPDGLQERLAEFEEKNEKQDDVSSFTHR 184
Query: 66 GHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSST 125
L ++ S N+ +S +T NSPFW H VY NV I + I P +APN DGID DSS
Sbjct: 185 PPLFQISESENVSVSGVTLENSPFWNTHVVYSENVTITDVNIANPADAPNGDGIDIDSSR 244
Query: 126 NVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGG 185
V I D YI +GDD + +KSG + G + P+S I V + GV IGSEMSG
Sbjct: 245 YVRISDTYINAGDDAICIKSGKNAEGREVGEPASQITVTNCT-VEAGHGGVVIGSEMSGD 303
Query: 186 IFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRIS------RGSN 239
+ +VTV D GVRIKT + RGG +E++ NI M R+ P I+ S+
Sbjct: 304 VRDVTVSNCTFTDTDRGVRIKTARDRGGVVEDLRFDNIVMRRIACPFTINGYYFMPLDSD 363
Query: 240 DHP-DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAP 296
P DEG P +R +SF N+ + A AG+ FE I +V + P
Sbjct: 364 SEPVDEG-----TPMVRNVSFTNITARQVETAGFFAGLPEQYFEGISFNDVQIDATRP 416
>gi|332299163|ref|YP_004441085.1| Polygalacturonase [Treponema brennaborense DSM 12168]
gi|332182266|gb|AEE17954.1| Polygalacturonase [Treponema brennaborense DSM 12168]
Length = 449
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/232 (39%), Positives = 124/232 (53%), Gaps = 33/232 (14%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWWN-------------------------------RTLKH 63
+V +TG G IDG G WWDL W R ++
Sbjct: 101 SVTVTG-KGVIDGSGDTWWDLRWQKADQGGPKSPIECKLAALNPGYRSQPGGGGGREVQF 159
Query: 64 TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDS 123
R LV+ N N+ + +T NSPFWT+HPVYC N++++G+TI P +APNTDGID DS
Sbjct: 160 LRPALVQFYNCTNVRLEQVTLENSPFWTVHPVYCDNLLVRGITIQNPKDAPNTDGIDIDS 219
Query: 124 STNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMS 183
TNV I DC + GDD +A+KSG GI + RP+ N+ VR + G+ IGSE +
Sbjct: 220 CTNVQIVDCEVSVGDDGIALKSGSGEDGIRVNRPTRNVTVRGCT-VRDAHGGMVIGSETA 278
Query: 184 GGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRIS 235
GI +V + GVRIK+ +GRGG I ++ +RN+ ME PI I+
Sbjct: 279 AGIRHVLAENCRFPGTDRGVRIKSRRGRGGEIYDVKLRNLVMEDNLCPIAIN 330
>gi|255594301|ref|XP_002536062.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223521016|gb|EEF26321.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 412
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 101/294 (34%), Positives = 163/294 (55%), Gaps = 20/294 (6%)
Query: 2 DEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTL 61
D++P+I+ L GR L+ D T++ I G GTIDG+GQ WW +R+
Sbjct: 93 DDYPLIEELRESGRQ---------PLLSSDKATDITING-GGTIDGRGQSWWP---DRSA 139
Query: 62 KHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLN-APNTDGID 120
+ R L+ +S++IL+ N+T +NSP W I P Y ++V + MT+ AP + NTDGID
Sbjct: 140 ANKRPRLIVFRHSSHILMENITVQNSPSWQIVPYYSTDLVFRNMTVYAPDRVSHNTDGID 199
Query: 121 PDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGS 180
P SS++V IE I++GDD +A+KSG + PS +I++R T G+ IGS
Sbjct: 200 PFSSSHVLIEHVTIDTGDDNIAIKSGQPN-SPGGDEPSHDIVIR--DSTFLHGHGLSIGS 256
Query: 181 EMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSND 240
E++GG++NV +++H GVRIK+++ RG +++ R++KME V PI IS
Sbjct: 257 EVAGGVYNVLAERIHFKGTGTGVRIKSNRDRGNELKHFVYRDLKMEDVNTPILISEFYPK 316
Query: 241 HPDE-GWDP--KALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 291
PD P + P+ I+ N+ + +A ++ G+ + + + NV +
Sbjct: 317 IPDVIDSQPVGRLTPRFSDITIENLTATGARQAAIIVGLPESPVTGLKLTNVRI 370
>gi|312126393|ref|YP_003991267.1| glycoside hydrolase family 28 [Caldicellulosiruptor hydrothermalis
108]
gi|311776412|gb|ADQ05898.1| glycoside hydrolase family 28 [Caldicellulosiruptor hydrothermalis
108]
Length = 447
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 98/276 (35%), Positives = 141/276 (51%), Gaps = 15/276 (5%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKHTRGHLVELMNSNNILISNLTFRN 86
LI+ ++ NV + G+ GTIDGQG+ WW L N+ LK+ R + NN+ I + N
Sbjct: 92 LIYAENAENVAVVGF-GTIDGQGEKWWRLHRNKELKYPRPRSICFYRCNNVTIEGIKIVN 150
Query: 87 SPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSG 146
SP WT++P+ C+NV + + I P ++PNTDGI+P+S V I +CYI+ GDD V +KSG
Sbjct: 151 SPSWTVNPIECQNVTVHNVKIQNPYDSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSG 210
Query: 147 WDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIK 206
+ P NI + GV IGSEMSGG+ NV + G+RIK
Sbjct: 211 TED--CKQKIPCENITITNCI-MAHGHGGVVIGSEMSGGVRNVVISNCIFEGTDRGIRIK 267
Query: 207 TDKGRGGYIENITIRNIKMERVKIPIRISR----GSNDHPDEGWDP------KALPKIRG 256
T +GRGG +E+I + NI M+ V P G WD ++ P +R
Sbjct: 268 TRRGRGGVVEDIRVSNIVMKNVMCPFAFYMYYHCGKGGKEKRVWDKSPYPVDESTPIVRR 327
Query: 257 ISFVNVVSVNTTKAP-VLAGIIGTQFEEICMKNVSL 291
I +VV A L G+ E++ NV++
Sbjct: 328 IYISDVVVREARAAAGFLYGLTEMPIEDVVFSNVTV 363
>gi|386727675|ref|YP_006194001.1| hypothetical protein B2K_37015 [Paenibacillus mucilaginosus K02]
gi|384094800|gb|AFH66236.1| hypothetical protein B2K_37015 [Paenibacillus mucilaginosus K02]
Length = 505
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 106/318 (33%), Positives = 155/318 (48%), Gaps = 47/318 (14%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLW--------------------WNRTLKHT-- 64
LI+G+ L V I G G I+GQGQ WWD + NR L T
Sbjct: 92 LIYGNGLKQVAIKG-EGVIEGQGQAWWDAYRVIRAGGAAPASEHLPKLVELNRVLTDTVK 150
Query: 65 -----------RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNA 113
R L++LM+ +++ +T +NSPFW H VYC +V ++G+ P
Sbjct: 151 SNIVEWQTQFLRPPLLQLMHCEEVVLEGITLQNSPFWNTHLVYCDDVSLRGVKFKNPSTT 210
Query: 114 PNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTC 173
PN DG+D DS +NV I DC+ + GDD + +KSG D G + RP+ N+ V +
Sbjct: 211 PNGDGLDVDSCSNVRISDCHFDVGDDCLCLKSGIDEDGRRVGRPTENVAVTNCT-MLHGH 269
Query: 174 SGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIR 233
GV +GSE +GGI NVT+ G+RIKT++ RGG +EN+ I NI ME V P+
Sbjct: 270 GGVVLGSETAGGIRNVTISNCIFIGTDRGIRIKTNRARGGGVENVRISNIYMEDVLCPLA 329
Query: 234 ISRGSNDHPDEG----WDPKALPKIRG---ISFVNVVSVNTTKAPVLAGII----GTQFE 282
I+ DE P+A+P G I + + V A AG I E
Sbjct: 330 INAFYKHGIDESNPLLTSPEAVPVTEGTPVIRHIQISDVTAKNARAAAGFIYGLPEMPIE 389
Query: 283 EICMKNVSL-LGLAPSAK 299
++ +++V+ + L P+ +
Sbjct: 390 DVALRHVTFEMTLDPAEE 407
>gi|379724921|ref|YP_005317052.1| hypothetical protein PM3016_7335 [Paenibacillus mucilaginosus 3016]
gi|378573593|gb|AFC33903.1| hypothetical protein PM3016_7335 [Paenibacillus mucilaginosus 3016]
Length = 506
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 106/318 (33%), Positives = 155/318 (48%), Gaps = 47/318 (14%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLW--------------------WNRTLKHT-- 64
LI+G+ L V I G G I+GQGQ WWD + NR L T
Sbjct: 93 LIYGNGLKQVAIKG-EGVIEGQGQAWWDAYRVIRAGGAAPASEHLPKLVELNRVLTDTVK 151
Query: 65 -----------RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNA 113
R L++LM+ +++ +T +NSPFW H VYC +V ++G+ P
Sbjct: 152 SNIVEWQTQFLRPPLLQLMHCEEVVLEGITLQNSPFWNTHLVYCDDVSLRGVKFKNPSTT 211
Query: 114 PNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTC 173
PN DG+D DS +NV I DC+ + GDD + +KSG D G + RP+ N+ V +
Sbjct: 212 PNGDGLDVDSCSNVRISDCHFDVGDDCLCLKSGIDEDGRRVGRPTENVAVTNCT-MLHGH 270
Query: 174 SGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIR 233
GV +GSE +GGI NVT+ G+RIKT++ RGG +EN+ I NI ME V P+
Sbjct: 271 GGVVLGSETAGGIRNVTISNCIFIGTDRGIRIKTNRARGGGVENVRISNIYMEDVLCPLA 330
Query: 234 ISRGSNDHPDEG----WDPKALPKIRG---ISFVNVVSVNTTKAPVLAGII----GTQFE 282
I+ DE P+A+P G I + + V A AG I E
Sbjct: 331 INAFYKHGIDESNPLLTSPEAVPVTEGTPVIRHIQISDVTAKNARAAAGFIYGLPEMPIE 390
Query: 283 EICMKNVSL-LGLAPSAK 299
++ +++V+ + L P+ +
Sbjct: 391 DVALRHVTFEMTLDPAEE 408
>gi|448394041|ref|ZP_21567906.1| glycoside hydrolase family 28 [Haloterrigena salina JCM 13891]
gi|445662631|gb|ELZ15395.1| glycoside hydrolase family 28 [Haloterrigena salina JCM 13891]
Length = 518
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 106/293 (36%), Positives = 139/293 (47%), Gaps = 39/293 (13%)
Query: 31 DHLTNVIITGYNGTIDGQGQMWWDLW------------------WNRTLKHT-------R 65
D NV ITG GTIDG G+ WW + + K R
Sbjct: 101 DDAENVSITG-RGTIDGGGEYWWQFYDAPESEIPDGLQERLAEFEEKNEKQDDVSSFTHR 159
Query: 66 GHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSST 125
L ++ S N+ +S +T NSPFW H VY NV I + I P +APN DGID DSS
Sbjct: 160 PPLFQIYGSENVSVSGVTLENSPFWNTHVVYSENVTITDVNIANPADAPNGDGIDIDSSR 219
Query: 126 NVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGG 185
V I D YI +GDD + +KSG + G + P+S I V + GV IGSEMSG
Sbjct: 220 YVRISDTYINAGDDAICIKSGKNAEGREVGEPASQITVTNCT-VEAGHGGVVIGSEMSGD 278
Query: 186 IFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRIS------RGSN 239
+ +VTV D GVRIKT + RGG +E++ NI M R+ P I+ S+
Sbjct: 279 VRDVTVTNCTFTDTDRGVRIKTARNRGGVVEDLRFDNIVMRRIACPFTINGYYFMPLDSD 338
Query: 240 DHP-DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 291
P DEG P +R +SF N+ + A AG+ FE I +V +
Sbjct: 339 SEPVDEG-----TPMVRNVSFTNITARQVETAGFFAGLPEQYFEGISFSDVQI 386
>gi|312136085|ref|YP_004003423.1| glycoside hydrolase family 28 [Caldicellulosiruptor owensensis OL]
gi|311776136|gb|ADQ05623.1| glycoside hydrolase family 28 [Caldicellulosiruptor owensensis OL]
Length = 447
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 98/276 (35%), Positives = 140/276 (50%), Gaps = 15/276 (5%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKHTRGHLVELMNSNNILISNLTFRN 86
LI+ ++ NV + G+ GTIDGQG+ WW L N+ LK+ R + NN+ I + N
Sbjct: 92 LIYAENAENVAVVGF-GTIDGQGEKWWRLHRNKELKYPRPRSICFYRCNNVTIEGIKIVN 150
Query: 87 SPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSG 146
SP WT++P+ C+NV + + I P ++PNTDGI+P+S V I +CYI+ GDD V +KSG
Sbjct: 151 SPSWTVNPIECQNVTVHNVKIQNPYDSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSG 210
Query: 147 WDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIK 206
+ P NI + GV IGSEMSGG+ NV + G+RIK
Sbjct: 211 TED--CKQKIPCENITITNCI-MAHGHGGVVIGSEMSGGVRNVVISNCIFEGTDRGIRIK 267
Query: 207 TDKGRGGYIENITIRNIKMERVKIPIRISR----GSNDHPDEGWDP------KALPKIRG 256
T +GRGG +E+I + NI M+ V P G + WD P +R
Sbjct: 268 TRRGRGGVVEDIRVSNIVMKNVMCPFAFYMYYHCGKGGKEKKVWDKSPYPVDSTTPVVRR 327
Query: 257 ISFVNVVSVNTTKAP-VLAGIIGTQFEEICMKNVSL 291
I +VV A L G+ E++ NV++
Sbjct: 328 IYISDVVVREARAAAGFLYGLTEMPIEDVVFSNVTV 363
>gi|71535025|gb|AAZ32910.1| polygalacturonase-like protein [Medicago sativa]
Length = 206
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 79/125 (63%), Positives = 100/125 (80%)
Query: 1 MDEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRT 60
++EWP+I PLPSYGRGR+ GRH SLI G +LT+VI+TG NGTIDGQG WW + N+
Sbjct: 82 INEWPVIKPLPSYGRGRDAAAGRHTSLIFGTNLTDVIVTGDNGTIDGQGSFWWQQFHNKK 141
Query: 61 LKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGID 120
LK+TR +L+ELM S+NI ISNLT +SP W IHPVY N++IKG+TI+AP+ +PNTDGI+
Sbjct: 142 LKYTRPYLIELMFSDNIQISNLTLLDSPSWNIHPVYSSNIIIKGITIIAPIRSPNTDGIN 201
Query: 121 PDSST 125
PDS T
Sbjct: 202 PDSCT 206
>gi|337752008|ref|YP_004646170.1| hypothetical protein KNP414_07814 [Paenibacillus mucilaginosus
KNP414]
gi|336303197|gb|AEI46300.1| hypothetical protein KNP414_07814 [Paenibacillus mucilaginosus
KNP414]
Length = 506
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 106/318 (33%), Positives = 155/318 (48%), Gaps = 47/318 (14%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLW--------------------WNRTLKHT-- 64
LI+G+ L V I G G I+GQGQ WWD + NR L T
Sbjct: 93 LIYGNGLKQVAIKG-EGVIEGQGQAWWDAYRVIRAGGTAPASEHLPKLVELNRVLTDTVK 151
Query: 65 -----------RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNA 113
R L++LM+ +++ +T +NSPFW H VYC +V ++G+ P
Sbjct: 152 SNIVEWQTQFLRPPLLQLMHCEEVVLEGITLQNSPFWNTHLVYCDDVSLRGVKFKNPSTT 211
Query: 114 PNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTC 173
PN DG+D DS +NV I DC+ + GDD + +KSG D G + RP+ N+ V +
Sbjct: 212 PNGDGLDVDSCSNVRISDCHFDVGDDCLCLKSGIDADGRRVGRPTENVAVTNCT-MLHGH 270
Query: 174 SGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIR 233
GV +GSE +GGI NVT+ G+RIKT++ RGG +EN+ I NI ME V P+
Sbjct: 271 GGVVLGSETAGGIRNVTISNCIFIGTDRGIRIKTNRARGGGVENVRISNIYMEDVLCPLA 330
Query: 234 ISRGSNDHPDEG----WDPKALPKIRG---ISFVNVVSVNTTKAPVLAGII----GTQFE 282
I+ DE P+A+P G I + + V A AG I E
Sbjct: 331 INAFYKHGIDESNPLLTSPEAVPVTEGTPVIRHIQISDVTAKNARAAAGFIYGLPEMPIE 390
Query: 283 EICMKNVSL-LGLAPSAK 299
++ +++V+ + L P+ +
Sbjct: 391 DVALRHVTFEMTLDPAEE 408
>gi|312794141|ref|YP_004027064.1| glycoside hydrolase family 28 [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312181281|gb|ADQ41451.1| glycoside hydrolase family 28 [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 447
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 98/276 (35%), Positives = 139/276 (50%), Gaps = 15/276 (5%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKHTRGHLVELMNSNNILISNLTFRN 86
LI+ ++ NV + G+ GTIDGQG+ WW L N+ LK+ R + NN+ I + N
Sbjct: 92 LIYAENAENVAVVGF-GTIDGQGEKWWRLHRNKELKYPRPRSICFYKCNNVTIEGIKIIN 150
Query: 87 SPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSG 146
SP WT++P+ C+NV + + I P ++PNTDGI+P+S V I +CYI+ GDD V +KSG
Sbjct: 151 SPSWTVNPIECQNVTVHNVKIQNPYDSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSG 210
Query: 147 WDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIK 206
+ P NI + GV IGSEMSGG+ NV + G+RIK
Sbjct: 211 TED--CKQKIPCENITITNCI-MAHGHGGVVIGSEMSGGVRNVVISNCIFEGTDRGIRIK 267
Query: 207 TDKGRGGYIENITIRNIKMERVKIPIRISR----GSNDHPDEGWDPKALPK------IRG 256
T +GRGG +E+I + NI M+ V P G WD P +R
Sbjct: 268 TRRGRGGVVEDIRVSNIVMKNVMCPFAFYMYYHCGKGGKEKRVWDKSPYPVDSTTPIVRR 327
Query: 257 ISFVNVVSVNTTKAP-VLAGIIGTQFEEICMKNVSL 291
I +VV A L G+ E++ NV++
Sbjct: 328 IYISDVVVREARAAAGFLYGLTEMPIEDVVFSNVTV 363
>gi|344995681|ref|YP_004798024.1| glycoside hydrolase family protein [Caldicellulosiruptor
lactoaceticus 6A]
gi|343963900|gb|AEM73047.1| glycoside hydrolase family 28 [Caldicellulosiruptor lactoaceticus
6A]
Length = 443
Score = 157 bits (397), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 98/276 (35%), Positives = 139/276 (50%), Gaps = 15/276 (5%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKHTRGHLVELMNSNNILISNLTFRN 86
LI+ ++ NV + G+ GTIDGQG+ WW L N+ LK+ R + NN+ I + N
Sbjct: 88 LIYAENAENVAVVGF-GTIDGQGEKWWRLHRNKELKYPRPRSICFYKCNNVTIEGIKIIN 146
Query: 87 SPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSG 146
SP WT++P+ C+NV + + I P ++PNTDGI+P+S V I +CYI+ GDD V +KSG
Sbjct: 147 SPSWTVNPIECQNVTVHNVKIQNPYDSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSG 206
Query: 147 WDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIK 206
+ P NI + GV IGSEMSGG+ NV + G+RIK
Sbjct: 207 TED--CKQKIPCENITITNCI-MAHGHGGVVIGSEMSGGVRNVVISNCIFEGTDRGIRIK 263
Query: 207 TDKGRGGYIENITIRNIKMERVKIPIRISR----GSNDHPDEGWDPKALPK------IRG 256
T +GRGG +E+I + NI M+ V P G WD P +R
Sbjct: 264 TRRGRGGVVEDIRVSNIVMKNVMCPFAFYMYYHCGKGGKEKRVWDKSPYPVDDTTPIVRR 323
Query: 257 ISFVNVVSVNTTKAP-VLAGIIGTQFEEICMKNVSL 291
I +VV A L G+ E++ NV++
Sbjct: 324 IYISDVVVREARAAAGFLYGLTEMPIEDVVFSNVTV 359
>gi|312621274|ref|YP_004022887.1| glycoside hydrolase family 28 [Caldicellulosiruptor kronotskyensis
2002]
gi|312201741|gb|ADQ45068.1| glycoside hydrolase family 28 [Caldicellulosiruptor kronotskyensis
2002]
Length = 447
Score = 157 bits (397), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 98/276 (35%), Positives = 141/276 (51%), Gaps = 15/276 (5%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKHTRGHLVELMNSNNILISNLTFRN 86
LI+ + NV + G+ GTIDGQG+ WW L N+ LK+ R + NN+ I + N
Sbjct: 92 LIYAEDAENVAVVGF-GTIDGQGEKWWRLHRNKELKYPRPRSICFYRCNNVTIEGIKIIN 150
Query: 87 SPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSG 146
SP WT++P+ C+NV + + I P ++PNTDGI+P+S V I +CYI+ GDD V +KSG
Sbjct: 151 SPSWTVNPIECQNVTVHNIKIQNPYDSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSG 210
Query: 147 WDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIK 206
+ + P NI + GV IGSEMSGG+ NV + G+RIK
Sbjct: 211 TEDCKERI--PCENITITNCI-MAHGHGGVVIGSEMSGGVRNVVISNCIFEGTDRGIRIK 267
Query: 207 TDKGRGGYIENITIRNIKMERVKIPIRISR----GSNDHPDEGWDP------KALPKIRG 256
T +GRGG +E+I + NI M+ V P G WD ++ P +R
Sbjct: 268 TRRGRGGVVEDIRVSNIVMKNVMCPFAFYMYYHCGKGGKEKRVWDKSPYPVDESTPIVRR 327
Query: 257 ISFVNVVSVNTTKAP-VLAGIIGTQFEEICMKNVSL 291
I +VV A L G+ E++ NV++
Sbjct: 328 IYISDVVVREARAAAGFLYGLTEMPIEDVVFSNVTV 363
>gi|344995379|ref|YP_004797722.1| glycoside hydrolase family protein [Caldicellulosiruptor
lactoaceticus 6A]
gi|343963598|gb|AEM72745.1| glycoside hydrolase family 28 [Caldicellulosiruptor lactoaceticus
6A]
Length = 447
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 98/276 (35%), Positives = 139/276 (50%), Gaps = 15/276 (5%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKHTRGHLVELMNSNNILISNLTFRN 86
LI+ ++ NV + G+ GTIDGQG+ WW L N+ LK+ R + NN+ I + N
Sbjct: 92 LIYAENAENVAVVGF-GTIDGQGEKWWRLHRNKELKYPRPRSICFYKCNNVTIEGIKIIN 150
Query: 87 SPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSG 146
SP WT++P+ C+NV + + I P ++PNTDGI+P+S V I +CYI+ GDD V +KSG
Sbjct: 151 SPSWTVNPIECQNVTVHNVKIQNPYDSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSG 210
Query: 147 WDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIK 206
+ P NI + GV IGSEMSGG+ NV + G+RIK
Sbjct: 211 TED--CKQKIPCENITITNCI-MAHGHGGVVIGSEMSGGVRNVVISNCIFEGTDRGIRIK 267
Query: 207 TDKGRGGYIENITIRNIKMERVKIPIRISR----GSNDHPDEGWDPKALPK------IRG 256
T +GRGG +E+I + NI M+ V P G WD P +R
Sbjct: 268 TRRGRGGVVEDIRVSNIVMKNVMCPFAFYMYYHCGKGGKEKRVWDKSPYPVDDTTPIVRR 327
Query: 257 ISFVNVVSVNTTKAP-VLAGIIGTQFEEICMKNVSL 291
I +VV A L G+ E++ NV++
Sbjct: 328 IYISDVVVREARAAAGFLYGLTEMPIEDVVFSNVTV 363
>gi|255641025|gb|ACU20792.1| unknown [Glycine max]
Length = 243
Score = 157 bits (396), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 71/118 (60%), Positives = 91/118 (77%)
Query: 1 MDEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRT 60
+ EWP I+PLPSYGRGR+ GR+ SLI G +LT+VI+TG NGTIDGQG WW + +
Sbjct: 126 ISEWPAIEPLPSYGRGRDAPAGRYTSLIFGTNLTDVIVTGGNGTIDGQGAFWWQKFHKKK 185
Query: 61 LKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDG 118
LK+TR +L+ELM S+ I ISNLT NSP W +HPVY N++IKG+TI+AP+ +PNTDG
Sbjct: 186 LKYTRPYLIELMFSDQIQISNLTLLNSPSWNLHPVYSSNIIIKGLTIIAPVPSPNTDG 243
>gi|406667543|ref|ZP_11075299.1| Exo-poly-alpha-D-galacturonosidase precursor [Bacillus isronensis
B3W22]
gi|405384596|gb|EKB44039.1| Exo-poly-alpha-D-galacturonosidase precursor [Bacillus isronensis
B3W22]
Length = 448
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/287 (34%), Positives = 149/287 (51%), Gaps = 16/287 (5%)
Query: 24 HISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKHTRGHLVELMNSNNILISNLT 83
++S I+ H N+ ITG+ GT++GQG WW L+ L + R +LV + + + +
Sbjct: 94 YMSCIYACHAKNIAITGF-GTLNGQGAYWWKLFKEDALAYPRPNLVSFDHCERVHVEQVK 152
Query: 84 FRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAV 143
+SP WT+HP C NV I ++I+ P N+PNTDGI+P+S NV I DC I+ GDD +A+
Sbjct: 153 MIDSPSWTVHPNDCDNVTISAVSIVNPANSPNTDGINPESCRNVRISDCSIDVGDDCIAI 212
Query: 144 KSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGV 203
KSG + + P NI + + GV GSEMSG I NV V G+
Sbjct: 213 KSGTEDAERVI--PCENITITNCT-MLHGHGGVVFGSEMSGDIRNVVVSNCIFEGTDRGI 269
Query: 204 RIKTDKGRGGYIENITIRNIKMERVKIPIRIS-------RGSNDH-PDEGWDP--KALPK 253
R K+ +GRGG IENI + NI M + P ++ RG + D+ P PK
Sbjct: 270 RFKSRRGRGGTIENIRVNNIVMNNIICPFILNLYYYHGPRGMEPYVSDKEVQPVTALTPK 329
Query: 254 IRGISFVNVVSVNTTKAP-VLAGIIGTQFEEICMKNVSLLGLAPSAK 299
R I F N+ + + T A + G+ E+I ++ + + P A+
Sbjct: 330 FRHIHFSNITATDVTAAAGFMYGLPEMPVEDITFSHIR-IAMKPDAE 375
>gi|222530340|ref|YP_002574222.1| galacturan 1,4-alpha-galacturonidase [Caldicellulosiruptor bescii
DSM 6725]
gi|222457187|gb|ACM61449.1| Galacturan 1,4-alpha-galacturonidase [Caldicellulosiruptor bescii
DSM 6725]
Length = 447
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/276 (35%), Positives = 139/276 (50%), Gaps = 15/276 (5%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKHTRGHLVELMNSNNILISNLTFRN 86
LI+ + NV + G+ GTIDGQG+ WW L N+ LK+ R + NN+ I + N
Sbjct: 92 LIYAEDAENVAVVGF-GTIDGQGEKWWRLHRNKELKYPRPRSICFYRCNNVTIEGIKIIN 150
Query: 87 SPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSG 146
SP WT++P+ C+NV + + I P ++PNTDGI+P+S V I +CYI+ GDD V +KSG
Sbjct: 151 SPSWTVNPIECQNVTVHNIKIQNPYDSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSG 210
Query: 147 WDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIK 206
+ + P NI + GV IGSEMSGG+ NV + G+RIK
Sbjct: 211 TEDCKERI--PCENITITNCI-MAHGHGGVVIGSEMSGGVRNVVISNCIFEGTDRGIRIK 267
Query: 207 TDKGRGGYIENITIRNIKMERVKIPIRISR----GSNDHPDEGWDPK------ALPKIRG 256
T +GRGG +E+I + NI M+ V P G WD P +R
Sbjct: 268 TRRGRGGVVEDIRVSNIVMKNVMCPFAFYMYYHCGKGGKEKRVWDKSPYPVDDTTPVVRR 327
Query: 257 ISFVNVVSVNTTKAP-VLAGIIGTQFEEICMKNVSL 291
I +VV A L G+ E++ NV++
Sbjct: 328 IYISDVVVRQARAAAGFLYGLTEMPIEDVVFSNVTV 363
>gi|433424436|ref|ZP_20406465.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp.
BAB2207]
gi|432198085|gb|ELK54408.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp.
BAB2207]
Length = 519
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/295 (33%), Positives = 145/295 (49%), Gaps = 28/295 (9%)
Query: 28 IHGDHLTNVIITGYNGTIDGQGQMWWDL-----------WWNRTLKHTRGH--------- 67
+H NV ITG G IDG G WW+ R + RG+
Sbjct: 94 LHVADAENVTITG-EGVIDGGGSYWWEFVSLPPEQYPSELTERLEEIRRGNQQDEVSTFT 152
Query: 68 ----LVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDS 123
L+++ N+ +S +T RNSPFW H VY +V I ++I P +APN DGID DS
Sbjct: 153 VRPPLLQIDGCENVTVSGVTLRNSPFWNTHVVYSDDVTIHDVSIQNPPDAPNGDGIDIDS 212
Query: 124 STNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMS 183
S V + D +I++GDD + +KSG D G + RP+ N++V + GV IGSE +
Sbjct: 213 SRFVRVSDTHIDAGDDAICLKSGKDEQGREVGRPTENVVVTNCT-VEHGHGGVVIGSETA 271
Query: 184 GGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPD 243
G + +VTV D G+RIK+ +GRGG +E++ I M RV P I+ D
Sbjct: 272 GDVRHVTVTNCTFTDTDRGIRIKSKRGRGGTVEDLRFDTIAMRRVACPFVINGYYQTDID 331
Query: 244 EGWDP--KALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAP 296
+P +A P +R + F ++ + A LAG+ +FE I +V + P
Sbjct: 332 SDPEPVTEATPNVRNVDFHHITAEEVESAAFLAGLPEQRFEGISFTDVDIDATRP 386
>gi|448419310|ref|ZP_21580352.1| exo-poly-alpha-D-galacturonosidase precursor [Halosarcina pallida
JCM 14848]
gi|445675300|gb|ELZ27833.1| exo-poly-alpha-D-galacturonosidase precursor [Halosarcina pallida
JCM 14848]
Length = 541
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 143/288 (49%), Gaps = 28/288 (9%)
Query: 35 NVIITGYNGTIDGQGQMWWDL-----------WWNRTLKHTRGH-------------LVE 70
NV ITG G +DG G WWDL R + GH L++
Sbjct: 124 NVTITG-EGVVDGGGSHWWDLVETPEAEFPDDLKERLAEIRSGHRQDDVSTFTVRPPLLQ 182
Query: 71 LMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIE 130
+ N+ +S +T RNSPFW H VY +V I ++I P +APN DGID DSS V +
Sbjct: 183 IHECENVTVSGVTLRNSPFWNTHVVYSEDVTIHDVSIRNPPDAPNGDGIDIDSSRFVRVS 242
Query: 131 DCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVT 190
D +I++GDD + +KSG D G + RP+ N++V + GV +GSE +G + +VT
Sbjct: 243 DTHIDAGDDAICLKSGKDEEGREVGRPTENVVVTNCT-VEHGHGGVVVGSETAGDVRHVT 301
Query: 191 VDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDP-- 248
V D G+RIK+ +GRGG +E++ I M RV P ++ D P
Sbjct: 302 VTNCTFTDTDRGIRIKSKRGRGGTVEDLRFDTIVMRRVACPFVLNGYYQTDIDSDPKPVD 361
Query: 249 KALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAP 296
+A P +R ++F ++ + A LAG+ +FE I +V + P
Sbjct: 362 EATPNVRNVNFHHITAEEVESAAFLAGLPERRFEGISFTDVDIDATRP 409
>gi|448581096|ref|ZP_21645086.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax gibbonsii
ATCC 33959]
gi|445733858|gb|ELZ85418.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax gibbonsii
ATCC 33959]
Length = 512
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/295 (33%), Positives = 146/295 (49%), Gaps = 28/295 (9%)
Query: 28 IHGDHLTNVIITGYNGTIDGQGQMWWDL-----------WWNRTLKHTRGH--------- 67
+H +NV ITG G IDG G WW+ R + RG+
Sbjct: 94 LHVADASNVTITG-EGVIDGGGSYWWEFVSLPPEEYPAELAERLEEIRRGNQQDEVSTFT 152
Query: 68 ----LVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDS 123
L+++ N+ +S +T RNSPFW H VY +V I ++I P +APN DGID DS
Sbjct: 153 VRPPLLQIDGCENVTVSGVTLRNSPFWNTHVVYSDDVTIHDVSIQNPPDAPNGDGIDIDS 212
Query: 124 STNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMS 183
S V + D +I++GDD + +KSG D G + RP+ N++V + GV IGSE +
Sbjct: 213 SRFVRVSDTHIDAGDDAICLKSGKDEQGREVGRPTENVVVTNCT-VEHGHGGVVIGSETA 271
Query: 184 GGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPD 243
G + +VTV D G+RIK+ +GRGG +E++ I M RV P I+ D
Sbjct: 272 GDVRHVTVTNCTFTDTDRGIRIKSKRGRGGTVEDLRFDTIVMRRVACPFVINGYYQTDID 331
Query: 244 EGWDP--KALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAP 296
+P +A P +R + F ++ + A LAG+ +FE I +V + P
Sbjct: 332 SEPEPVTEATPNVRNVDFHHITAEEVESAAFLAGLPEQRFEGISFTDVDIDATRP 386
>gi|302872741|ref|YP_003841377.1| polygalacturonase [Caldicellulosiruptor obsidiansis OB47]
gi|302575600|gb|ADL43391.1| Polygalacturonase [Caldicellulosiruptor obsidiansis OB47]
Length = 447
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/276 (35%), Positives = 141/276 (51%), Gaps = 15/276 (5%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKHTRGHLVELMNSNNILISNLTFRN 86
LI+ ++ NV + G+ GTIDGQG+ WW L ++ LK+ R + NN+ I + N
Sbjct: 92 LIYAENAENVAVVGF-GTIDGQGEKWWRLHRDKELKYPRPRSICFYRCNNVTIEGIKIVN 150
Query: 87 SPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSG 146
SP WT++P+ C+NV + + I P ++PNTDGI+P+S V I +CYI+ GDD V +KSG
Sbjct: 151 SPSWTVNPIECQNVTVHNVKIQNPYDSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSG 210
Query: 147 WDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIK 206
+ + P NI + GV IGSEMSGG+ NV + G+RIK
Sbjct: 211 TEDCKERI--PCENITITNCI-MAHGHGGVVIGSEMSGGVRNVVISNCVFEGTDRGIRIK 267
Query: 207 TDKGRGGYIENITIRNIKMERVKIPIRISR----GSNDHPDEGWDP------KALPKIRG 256
T +GRGG +E+I + NI M+ V P G + WD P +R
Sbjct: 268 TRRGRGGVVEDIRVSNIVMKNVMCPFAFYMYYHCGKGGKEKKVWDKSPYPVDSTTPVVRR 327
Query: 257 ISFVNVVSVNTTKAP-VLAGIIGTQFEEICMKNVSL 291
I +VV A L G+ E++ NV++
Sbjct: 328 IYISDVVVREARAAAGFLYGLTEMPIEDVVFSNVTV 363
>gi|189462203|ref|ZP_03010988.1| hypothetical protein BACCOP_02885 [Bacteroides coprocola DSM 17136]
gi|189431106|gb|EDV00091.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 460
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 89/240 (37%), Positives = 134/240 (55%), Gaps = 32/240 (13%)
Query: 15 RGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKHTRGHLVELMNS 74
G E G H +I+ H N+ ITG GTID QG + + W++ + R L E+ +
Sbjct: 125 EGTELYG--HSPMIYAYHANNIAITG-KGTIDAQGGLEF-AAWSKIEANDRDRLREMGDK 180
Query: 75 -------------------------NNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILA 109
+ +LI +T ++SPFWTIHPVYC NV+++G+TI +
Sbjct: 181 LVPVHERIFGEGTVLRPSCIQPYGCSRVLIEGITVKDSPFWTIHPVYCDNVIVRGVTIDS 240
Query: 110 PLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGT 169
PN DG DP+S+TNV IE+C +GDD +A+KSG D G + RPS NI++R
Sbjct: 241 HF--PNNDGCDPESTTNVLIENCTFRTGDDAIAIKSGRDTDGRYIGRPSRNIVIRNCIFH 298
Query: 170 TPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVK 229
+ C+G+ IGSEMSGG +V ++ + + + K+++ RGGYI N+ + +I +ER K
Sbjct: 299 S-ECNGLCIGSEMSGGASDVYMNNIEIGTVKNAIYFKSNRDRGGYIRNVVVDSITVERAK 357
>gi|430837653|ref|ZP_19455615.1| polygalacturonase [Enterococcus faecium E0680]
gi|430840334|ref|ZP_19458261.1| polygalacturonase [Enterococcus faecium E0688]
gi|430859274|ref|ZP_19476887.1| polygalacturonase [Enterococcus faecium E1552]
gi|430487167|gb|ELA63937.1| polygalacturonase [Enterococcus faecium E0680]
gi|430489820|gb|ELA66395.1| polygalacturonase [Enterococcus faecium E0688]
gi|430544018|gb|ELA84068.1| polygalacturonase [Enterococcus faecium E1552]
Length = 445
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 95/284 (33%), Positives = 149/284 (52%), Gaps = 23/284 (8%)
Query: 24 HISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNR--TLKHTRGHLVELMNSNNILISN 81
+ S I+ ++ N+ +TG+ GT+DG G+ WW + N L + R L+ N + I + N
Sbjct: 86 YASCIYAQNVENISVTGF-GTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVKN 144
Query: 82 LTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLV 141
+ SP WTI+P+ C N +TIL P ++PNTDGIDP+S NV I +C+I+ GDD +
Sbjct: 145 IKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDCI 204
Query: 142 AVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAA 201
A+K+G + +A NI + + GV +GSEMSG I N+T+ +
Sbjct: 205 AIKAGTEDTYERIA--CENITITNCT-MVHGHGGVVLGSEMSGSIRNITISNCIFQETDR 261
Query: 202 GVRIKTDKGRGGYIENITIRNIKMERVKIPIRIS-------RGSNDHPDEGWDPKAL--- 251
G+R+K+ +GRGG +E+I + NI M+ V P ++ RG + W+ KA
Sbjct: 262 GIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYV---WEKKAYPID 318
Query: 252 ---PKIRGISFVNVVSVNT-TKAPVLAGIIGTQFEEICMKNVSL 291
P R I F N+ + N A + G+ +EI N+ +
Sbjct: 319 ERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDV 362
>gi|310642874|ref|YP_003947632.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus polymyxa SC2]
gi|309247824|gb|ADO57391.1| Galacturan 1,4-alpha-galacturonidase [Paenibacillus polymyxa SC2]
gi|392303699|emb|CCI70062.1| Polygalacturonase PG [Paenibacillus polymyxa M1]
Length = 453
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 99/284 (34%), Positives = 149/284 (52%), Gaps = 23/284 (8%)
Query: 24 HISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWN--RTLKHTRGHLVELMNSNNILISN 81
H S I+G++L N+ ITG +GT+DG GQ WW+ N L++ R L+ + I +
Sbjct: 90 HASCIYGENLENISITG-SGTLDGNGQPWWEKHRNHPEELQYPRPKLISFDRCQRVTIKD 148
Query: 82 LTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLV 141
+ +NSP WT++P+ C NV I ++IL P ++PNTDGI+P+S +NV I +C I+ GDD +
Sbjct: 149 VMLKNSPSWTVNPIACYNVTIDNLSILNPADSPNTDGINPESCSNVRISNCNIDVGDDCI 208
Query: 142 AVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAA 201
A+K+G + + P NI + + V +GSEMSG I NVT+
Sbjct: 209 AIKAGTEDTQERI--PCENITITNCT-MVHGHGAVVLGSEMSGDIRNVTISNCVFKQTDR 265
Query: 202 GVRIKTDKGRGGYIENITIRNIKMERVKIPIRIS-------RGSNDHPDEGWDPK----- 249
G+R+K+ +GRGG IE+I I NI ME V P ++ RG + + WD
Sbjct: 266 GIRLKSRRGRGGIIEDIRISNIVMEEVICPFILNLYYFCGPRGKDKYV---WDKNPYPIT 322
Query: 250 -ALPKIRGISFVNVVSVNTTKAP-VLAGIIGTQFEEICMKNVSL 291
P R I F ++ + A L G+ EI N+ +
Sbjct: 323 DETPCFRRIHFSDITARQVHAAAGFLYGLAEQYIAEITFSNIDI 366
>gi|399031128|ref|ZP_10731267.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398070597|gb|EJL61889.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 524
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 105/302 (34%), Positives = 150/302 (49%), Gaps = 39/302 (12%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDL------------------------------- 55
L + + N+ I G G IDGQG+ WW+
Sbjct: 115 LFYAKDVENITIKG-RGVIDGQGKAWWNEVYRIETAKGPIPETKYQKMWTEQNKGIVYEP 173
Query: 56 WWNRTL-KHT-RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNA 113
++ RT+ KH R + N NILI +TF+NSPFWTI+P +C NV + G+TI P ++
Sbjct: 174 YYKRTIDKHFFRPSFFQAYNCKNILIEGVTFKNSPFWTINPEFCDNVTVTGITINNP-HS 232
Query: 114 PNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTC 173
PNTDGI+P S TNV I +C+I GDD + +KSG D G + + N+ + + +
Sbjct: 233 PNTDGINPSSCTNVHISNCHISVGDDCITIKSGRDADGRKYGKATENVTITNCTMLSGH- 291
Query: 174 SGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIR 233
GV IGSEMSGGI +T+ G+RIK +GRGG +E+I + NI M+ +K
Sbjct: 292 GGVVIGSEMSGGIKKITISNCVFDGTDRGIRIKAARGRGGVVEDIRVDNIVMKNIKEEAI 351
Query: 234 ISR--GSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 291
I D+P E + P R I NV N KA + GI+ + I N+++
Sbjct: 352 ILDLFYDKDNPVEPVTERT-PIFRNIHISNVTGGNVNKAGFVRGIVEMPIQNITFSNINM 410
Query: 292 LG 293
G
Sbjct: 411 DG 412
>gi|336251837|ref|YP_004585805.1| Polygalacturonase [Halopiger xanaduensis SH-6]
gi|335339761|gb|AEH38999.1| Polygalacturonase [Halopiger xanaduensis SH-6]
Length = 516
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 109/320 (34%), Positives = 147/320 (45%), Gaps = 33/320 (10%)
Query: 35 NVIITGYNGTIDGQGQMWWDLW----------WNRTLKHTRGH---------------LV 69
NV I+G GTIDG GQ WW + L G L
Sbjct: 105 NVEISG-RGTIDGNGQYWWQFYGADDDELPEGLRERLAEFNGKNDKADDVSSFTLRPPLF 163
Query: 70 ELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLN-APNTDGIDPDSSTNVC 128
++ S N+ +S +T +NSPFW H VY NV I + +L P APN DGID DSS V
Sbjct: 164 QISESENVTVSGVTLQNSPFWNTHVVYSENVTISDVNVLNPAEGAPNGDGIDIDSSRYVR 223
Query: 129 IEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFN 188
I D YI +GDD + +KSG + G + P+S I V + GV IGSEMSG + +
Sbjct: 224 ISDAYINAGDDAICIKSGKNAEGREVGEPASQITVTNCT-VEAGHGGVVIGSEMSGDVRD 282
Query: 189 VTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDP 248
V V D GVRIKT + RGG +E++ NI M R+ P I+ D +P
Sbjct: 283 VAVTNCTFTDTDRGVRIKTQRDRGGVVEDLRFDNIVMRRIASPFTINGYYFTPLDSEPEP 342
Query: 249 --KALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAP--SAKWQCQF 304
+ P +R ++F N+ + N A AG+ FE I NV + P +
Sbjct: 343 VDEGTPMVRNVTFSNITARNVETAGFFAGLPEQYFEGIEFDNVRIDATRPLDATDLDPAM 402
Query: 305 VSGFTSQVFPLPCPQLQNKS 324
SG+ Q L C + + S
Sbjct: 403 ASGY-EQTHGLFCKSIADIS 421
>gi|430854295|ref|ZP_19472011.1| polygalacturonase [Enterococcus faecium E1258]
gi|430539024|gb|ELA79287.1| polygalacturonase [Enterococcus faecium E1258]
Length = 445
Score = 154 bits (388), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 94/284 (33%), Positives = 150/284 (52%), Gaps = 23/284 (8%)
Query: 24 HISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRT--LKHTRGHLVELMNSNNILISN 81
+ S I+ ++ N+ +TG+ GT+DG G+ WW + N + L + R L+ N + I + +
Sbjct: 86 YASCIYAQNVENISVTGF-GTLDGNGKKWWHTFRNESDNLAYPRPKLMSFHNCHRITVKD 144
Query: 82 LTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLV 141
+ SP WTI+P+ C N +TIL P ++PNTDGIDP+S NV I +C+I+ GDD +
Sbjct: 145 IKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDCI 204
Query: 142 AVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAA 201
A+K+G + +A NI + + GV +GSEMSG I N+T+ +
Sbjct: 205 AIKAGTEDTYERIA--CENITITNCT-MVHGHGGVVLGSEMSGSIRNITISNCIFQETDR 261
Query: 202 GVRIKTDKGRGGYIENITIRNIKMERVKIPIRIS-------RGSNDHPDEGWDPKAL--- 251
G+R+K+ +GRGG +E+I + NI M+ V P ++ RG + W+ KA
Sbjct: 262 GIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYV---WEKKAYPID 318
Query: 252 ---PKIRGISFVNVVSVNT-TKAPVLAGIIGTQFEEICMKNVSL 291
P R I F N+ + N A + G+ +EI N+ +
Sbjct: 319 ERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDV 362
>gi|253573347|ref|ZP_04850690.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus sp. oral taxon
786 str. D14]
gi|251846875|gb|EES74880.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus sp. oral taxon
786 str. D14]
Length = 442
Score = 154 bits (388), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 96/284 (33%), Positives = 149/284 (52%), Gaps = 23/284 (8%)
Query: 24 HISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNR--TLKHTRGHLVELMNSNNILISN 81
H S I+G+ L NV +TG +G I+G GQ WW+ NR L + R L+ + I +
Sbjct: 90 HASCIYGEDLENVTVTG-SGCINGNGQPWWEKQRNRPEELHYPRPKLISFDRCRRVTIRD 148
Query: 82 LTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLV 141
++ +SP WT++P+ C NV I ++IL P ++PNTDGI+P+S +NV I +C+I+ GDD +
Sbjct: 149 VSLVDSPSWTVNPIRCHNVTIDNVSILNPADSPNTDGINPESCSNVRISNCHIDVGDDCI 208
Query: 142 AVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAA 201
A+K+G + A P NI + + GV IGSEMSG I NVT+
Sbjct: 209 AIKAGTEE--TAERVPCENITITNCT-MIHGHGGVVIGSEMSGNIRNVTISNCVFQHTDR 265
Query: 202 GVRIKTDKGRGGYIENITIRNIKMERVKIPIRIS-------RGSNDHPDEGWDP------ 248
G+R+K+ +GRGG +E+I + N+ ME V P ++ RG + WD
Sbjct: 266 GIRLKSRRGRGGIVEDIRVSNLVMENVICPFIMNLYYFCGPRGKEKYV---WDKNPYPVT 322
Query: 249 KALPKIRGISFVNVVSVNTTKAP-VLAGIIGTQFEEICMKNVSL 291
+ P+ R I F ++ + A L G+ E+ + +
Sbjct: 323 EETPQFRRIHFSDITAREVHAAAGFLYGLAEQYISEVTFDQIEI 366
>gi|225165583|ref|ZP_03727398.1| glycoside hydrolase family 28 [Diplosphaera colitermitum TAV2]
gi|224800169|gb|EEG18584.1| glycoside hydrolase family 28 [Diplosphaera colitermitum TAV2]
Length = 421
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 104/301 (34%), Positives = 155/301 (51%), Gaps = 34/301 (11%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNR-----------------------TLKH 63
L++ T++ ITG GT DGQG WW+ N
Sbjct: 109 LLYARDATHIAITG-RGTFDGQGDAWWEWKKNEDGVRRLIDMVARRVPIAERIFGTVADC 167
Query: 64 TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDS 123
R +++E +N ++LI N+T R+SP + +HPV C NV ++G++IL N PN DGIDP+
Sbjct: 168 VRPNMLEFINCRDVLIENVTLRDSPAYLVHPVGCENVTLRGLSILG--NGPNNDGIDPEY 225
Query: 124 STNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMS 183
NV IEDC +++GDD + +KSG D G A RP+ N+IVRR+ G+ +GSE+S
Sbjct: 226 CRNVLIEDCLVDTGDDCICLKSGRDQDGWAENRPTENVIVRRIRTRRGH-GGIVLGSELS 284
Query: 184 GGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERV---KIPIRISRGSND 240
GI NV V+ G+RIK+ GRGG++ENI +RNI+M + I I + GS
Sbjct: 285 SGIRNVLVEDCDFSGTERGIRIKSAPGRGGFVENIHMRNIRMSDIIDEAIIIHMDYGSVA 344
Query: 241 HPDEG----WDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAP 296
G + + ++R I +V + KA + G E I ++N+ L P
Sbjct: 345 KGQVGSAFQSNTPSPTRMRNILIEDVTCASAGKALDITGDAALPPESITLRNLRLHATRP 404
Query: 297 S 297
+
Sbjct: 405 A 405
>gi|430834097|ref|ZP_19452106.1| polygalacturonase [Enterococcus faecium E0679]
gi|430485620|gb|ELA62520.1| polygalacturonase [Enterococcus faecium E0679]
Length = 452
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 94/284 (33%), Positives = 149/284 (52%), Gaps = 23/284 (8%)
Query: 24 HISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNR--TLKHTRGHLVELMNSNNILISN 81
+ S I+ ++ N+ +TG+ GT+DG G+ WW + N L + R L+ N + I + +
Sbjct: 86 YASCIYAQNVENISVTGF-GTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVKD 144
Query: 82 LTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLV 141
+ SP WTI+P+ C N +TIL P ++PNTDGIDP+S NV I +C+I+ GDD +
Sbjct: 145 IKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDCI 204
Query: 142 AVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAA 201
A+K+G + +A NI + + GV +GSEMSG I N+T+ +
Sbjct: 205 AIKAGTEDTYERIA--CENITITNCT-MVHGHGGVVLGSEMSGSIRNITISNCIFQETDR 261
Query: 202 GVRIKTDKGRGGYIENITIRNIKMERVKIPIRIS-------RGSNDHPDEGWDPKAL--- 251
G+R+K+ +GRGG +E+I + NI M+ V P ++ RG + W+ KA
Sbjct: 262 GIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYV---WEKKAYPID 318
Query: 252 ---PKIRGISFVNVVSVNT-TKAPVLAGIIGTQFEEICMKNVSL 291
P R I F N+ + N A + G+ +EI N+ +
Sbjct: 319 ERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDV 362
>gi|424907689|ref|ZP_18331159.1| polygalacturonase [Enterococcus faecium R497]
gi|425060672|ref|ZP_18463956.1| polygalacturonase [Enterococcus faecium 503]
gi|402930043|gb|EJX49746.1| polygalacturonase [Enterococcus faecium R497]
gi|403042383|gb|EJY53341.1| polygalacturonase [Enterococcus faecium 503]
Length = 445
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 94/284 (33%), Positives = 149/284 (52%), Gaps = 23/284 (8%)
Query: 24 HISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNR--TLKHTRGHLVELMNSNNILISN 81
+ S I+ ++ N+ +TG+ GT+DG G+ WW + N L + R L+ N + I + +
Sbjct: 86 YASCIYAQNVENISVTGF-GTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVKD 144
Query: 82 LTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLV 141
+ SP WTI+P+ C N +TIL P ++PNTDGIDP+S NV I +C+I+ GDD +
Sbjct: 145 IKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDCI 204
Query: 142 AVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAA 201
A+K+G + +A NI + + GV +GSEMSG I N+T+ +
Sbjct: 205 AIKAGTEDTYERIA--CENITITNCT-MVHGHGGVVLGSEMSGSIRNITISNCIFQETDR 261
Query: 202 GVRIKTDKGRGGYIENITIRNIKMERVKIPIRIS-------RGSNDHPDEGWDPKAL--- 251
G+R+K+ +GRGG +E+I + NI M+ V P ++ RG + W+ KA
Sbjct: 262 GIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYV---WEKKAYPID 318
Query: 252 ---PKIRGISFVNVVSVNT-TKAPVLAGIIGTQFEEICMKNVSL 291
P R I F N+ + N A + G+ +EI N+ +
Sbjct: 319 ERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDV 362
>gi|69244135|ref|ZP_00602671.1| Galacturan 1,4-alpha-galacturonidase [Enterococcus faecium DO]
gi|257880495|ref|ZP_05660148.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,230,933]
gi|257886384|ref|ZP_05666037.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,501]
gi|257891474|ref|ZP_05671127.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,410]
gi|257894583|ref|ZP_05674236.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,408]
gi|260562495|ref|ZP_05833005.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium C68]
gi|293559894|ref|ZP_06676406.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1162]
gi|293568212|ref|ZP_06679546.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1071]
gi|314938527|ref|ZP_07845812.1| polygalacturonase [Enterococcus faecium TX0133a04]
gi|314942455|ref|ZP_07849295.1| polygalacturonase [Enterococcus faecium TX0133C]
gi|314949488|ref|ZP_07852823.1| polygalacturonase [Enterococcus faecium TX0082]
gi|314952932|ref|ZP_07855899.1| polygalacturonase [Enterococcus faecium TX0133A]
gi|314992201|ref|ZP_07857644.1| polygalacturonase [Enterococcus faecium TX0133B]
gi|314995242|ref|ZP_07860354.1| polygalacturonase [Enterococcus faecium TX0133a01]
gi|383329854|ref|YP_005355738.1| polygalacturonase [Enterococcus faecium Aus0004]
gi|389869663|ref|YP_006377086.1| pectin lyase [Enterococcus faecium DO]
gi|406581497|ref|ZP_11056639.1| polygalacturonase [Enterococcus sp. GMD4E]
gi|406583788|ref|ZP_11058833.1| polygalacturonase [Enterococcus sp. GMD3E]
gi|406586132|ref|ZP_11061069.1| polygalacturonase [Enterococcus sp. GMD2E]
gi|406591696|ref|ZP_11065942.1| polygalacturonase [Enterococcus sp. GMD1E]
gi|410936309|ref|ZP_11368176.1| pectin lyase [Enterococcus sp. GMD5E]
gi|415891706|ref|ZP_11549795.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E4453]
gi|416141642|ref|ZP_11599435.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E4452]
gi|424845976|ref|ZP_18270576.1| polygalacturonase [Enterococcus faecium R501]
gi|424854976|ref|ZP_18279307.1| polygalacturonase [Enterococcus faecium R499]
gi|424960548|ref|ZP_18375053.1| polygalacturonase [Enterococcus faecium P1986]
gi|424964739|ref|ZP_18378806.1| polygalacturonase [Enterococcus faecium P1190]
gi|424971119|ref|ZP_18384580.1| polygalacturonase [Enterococcus faecium P1139]
gi|424974622|ref|ZP_18387847.1| polygalacturonase [Enterococcus faecium P1137]
gi|424978117|ref|ZP_18391065.1| polygalacturonase [Enterococcus faecium P1123]
gi|424981120|ref|ZP_18393872.1| polygalacturonase [Enterococcus faecium ERV99]
gi|424983707|ref|ZP_18396282.1| polygalacturonase [Enterococcus faecium ERV69]
gi|424987493|ref|ZP_18399867.1| polygalacturonase [Enterococcus faecium ERV38]
gi|424990935|ref|ZP_18403122.1| polygalacturonase [Enterococcus faecium ERV26]
gi|425007173|ref|ZP_18418318.1| polygalacturonase [Enterococcus faecium ERV1]
gi|425014684|ref|ZP_18425349.1| polygalacturonase [Enterococcus faecium E417]
gi|425021605|ref|ZP_18431844.1| polygalacturonase [Enterococcus faecium C497]
gi|425023089|ref|ZP_18433228.1| polygalacturonase [Enterococcus faecium C1904]
gi|425034680|ref|ZP_18439557.1| polygalacturonase [Enterococcus faecium 514]
gi|425042053|ref|ZP_18446419.1| polygalacturonase [Enterococcus faecium 511]
gi|425046647|ref|ZP_18450644.1| polygalacturonase [Enterococcus faecium 510]
gi|425047911|ref|ZP_18451842.1| polygalacturonase [Enterococcus faecium 509]
gi|425051834|ref|ZP_18455475.1| polygalacturonase [Enterococcus faecium 506]
gi|427397520|ref|ZP_18890002.1| hypothetical protein HMPREF9307_02178 [Enterococcus durans
FB129-CNAB-4]
gi|430824500|ref|ZP_19443057.1| polygalacturonase [Enterococcus faecium E0120]
gi|430832640|ref|ZP_19450680.1| polygalacturonase [Enterococcus faecium E0333]
gi|430845579|ref|ZP_19463463.1| polygalacturonase [Enterococcus faecium E1050]
gi|430848400|ref|ZP_19466219.1| polygalacturonase [Enterococcus faecium E1133]
gi|430856194|ref|ZP_19473897.1| polygalacturonase [Enterococcus faecium E1392]
gi|430868562|ref|ZP_19482856.1| polygalacturonase [Enterococcus faecium E1574]
gi|430968703|ref|ZP_19487864.1| polygalacturonase [Enterococcus faecium E1576]
gi|431017544|ref|ZP_19490421.1| polygalacturonase [Enterococcus faecium E1578]
gi|431243672|ref|ZP_19503845.1| polygalacturonase [Enterococcus faecium E1622]
gi|431261230|ref|ZP_19505727.1| polygalacturonase [Enterococcus faecium E1623]
gi|431323325|ref|ZP_19509129.1| polygalacturonase [Enterococcus faecium E1626]
gi|431388088|ref|ZP_19511694.1| polygalacturonase [Enterococcus faecium E1627]
gi|431520927|ref|ZP_19516641.1| polygalacturonase [Enterococcus faecium E1634]
gi|431565473|ref|ZP_19519835.1| polygalacturonase [Enterococcus faecium E1731]
gi|431744393|ref|ZP_19533261.1| polygalacturonase [Enterococcus faecium E2071]
gi|431747806|ref|ZP_19536575.1| polygalacturonase [Enterococcus faecium E2134]
gi|431750363|ref|ZP_19539082.1| polygalacturonase [Enterococcus faecium E2297]
gi|431755429|ref|ZP_19544078.1| polygalacturonase [Enterococcus faecium E2883]
gi|431769096|ref|ZP_19557524.1| polygalacturonase [Enterococcus faecium E1321]
gi|431771659|ref|ZP_19560039.1| polygalacturonase [Enterococcus faecium E1644]
gi|431774529|ref|ZP_19562836.1| polygalacturonase [Enterococcus faecium E2369]
gi|431780636|ref|ZP_19568809.1| polygalacturonase [Enterococcus faecium E4389]
gi|447913741|ref|YP_007395153.1| Polygalacturonase [Enterococcus faecium NRRL B-2354]
gi|68196592|gb|EAN11018.1| Galacturan 1,4-alpha-galacturonidase [Enterococcus faecium DO]
gi|257814723|gb|EEV43481.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,230,933]
gi|257822240|gb|EEV49370.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,501]
gi|257827834|gb|EEV54460.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,410]
gi|257830962|gb|EEV57569.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,408]
gi|260073180|gb|EEW61525.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium C68]
gi|291589112|gb|EFF20926.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1071]
gi|291606166|gb|EFF35588.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1162]
gi|313590498|gb|EFR69343.1| polygalacturonase [Enterococcus faecium TX0133a01]
gi|313593259|gb|EFR72104.1| polygalacturonase [Enterococcus faecium TX0133B]
gi|313595004|gb|EFR73849.1| polygalacturonase [Enterococcus faecium TX0133A]
gi|313598763|gb|EFR77608.1| polygalacturonase [Enterococcus faecium TX0133C]
gi|313642155|gb|EFS06735.1| polygalacturonase [Enterococcus faecium TX0133a04]
gi|313644102|gb|EFS08682.1| polygalacturonase [Enterococcus faecium TX0082]
gi|364090036|gb|EHM32668.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E4452]
gi|364093766|gb|EHM36003.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E4453]
gi|378939548|gb|AFC64620.1| polygalacturonase [Enterococcus faecium Aus0004]
gi|388534912|gb|AFK60104.1| pectin lyase [Enterococcus faecium DO]
gi|402919804|gb|EJX40370.1| polygalacturonase [Enterococcus faecium R501]
gi|402931909|gb|EJX51460.1| polygalacturonase [Enterococcus faecium R499]
gi|402945957|gb|EJX64277.1| polygalacturonase [Enterococcus faecium P1190]
gi|402947330|gb|EJX65549.1| polygalacturonase [Enterococcus faecium P1986]
gi|402955965|gb|EJX73454.1| polygalacturonase [Enterococcus faecium P1137]
gi|402959987|gb|EJX77180.1| polygalacturonase [Enterococcus faecium P1139]
gi|402963038|gb|EJX79936.1| polygalacturonase [Enterococcus faecium P1123]
gi|402964595|gb|EJX81367.1| polygalacturonase [Enterococcus faecium ERV99]
gi|402970840|gb|EJX87153.1| polygalacturonase [Enterococcus faecium ERV69]
gi|402974315|gb|EJX90374.1| polygalacturonase [Enterococcus faecium ERV38]
gi|402978299|gb|EJX94052.1| polygalacturonase [Enterococcus faecium ERV26]
gi|402995607|gb|EJY10050.1| polygalacturonase [Enterococcus faecium ERV1]
gi|402997994|gb|EJY12279.1| polygalacturonase [Enterococcus faecium E417]
gi|403006146|gb|EJY19813.1| polygalacturonase [Enterococcus faecium C497]
gi|403010843|gb|EJY24188.1| polygalacturonase [Enterococcus faecium C1904]
gi|403019826|gb|EJY32405.1| polygalacturonase [Enterococcus faecium 514]
gi|403023540|gb|EJY35785.1| polygalacturonase [Enterococcus faecium 510]
gi|403024463|gb|EJY36619.1| polygalacturonase [Enterococcus faecium 511]
gi|403032239|gb|EJY43807.1| polygalacturonase [Enterococcus faecium 509]
gi|403036560|gb|EJY47906.1| polygalacturonase [Enterococcus faecium 506]
gi|404452556|gb|EJZ99740.1| polygalacturonase [Enterococcus sp. GMD4E]
gi|404456111|gb|EKA02868.1| polygalacturonase [Enterococcus sp. GMD3E]
gi|404461640|gb|EKA07534.1| polygalacturonase [Enterococcus sp. GMD2E]
gi|404467219|gb|EKA12401.1| polygalacturonase [Enterococcus sp. GMD1E]
gi|410735255|gb|EKQ77169.1| pectin lyase [Enterococcus sp. GMD5E]
gi|425722196|gb|EKU85093.1| hypothetical protein HMPREF9307_02178 [Enterococcus durans
FB129-CNAB-4]
gi|430441028|gb|ELA51171.1| polygalacturonase [Enterococcus faecium E0120]
gi|430479695|gb|ELA56911.1| polygalacturonase [Enterococcus faecium E0333]
gi|430495386|gb|ELA71561.1| polygalacturonase [Enterococcus faecium E1050]
gi|430534971|gb|ELA75396.1| polygalacturonase [Enterococcus faecium E1133]
gi|430545280|gb|ELA85263.1| polygalacturonase [Enterococcus faecium E1392]
gi|430548826|gb|ELA88674.1| polygalacturonase [Enterococcus faecium E1574]
gi|430554873|gb|ELA94441.1| polygalacturonase [Enterococcus faecium E1576]
gi|430559243|gb|ELA98603.1| polygalacturonase [Enterococcus faecium E1578]
gi|430571641|gb|ELB10527.1| polygalacturonase [Enterococcus faecium E1622]
gi|430576635|gb|ELB15272.1| polygalacturonase [Enterococcus faecium E1623]
gi|430577973|gb|ELB16549.1| polygalacturonase [Enterococcus faecium E1626]
gi|430580353|gb|ELB18826.1| polygalacturonase [Enterococcus faecium E1627]
gi|430585070|gb|ELB23371.1| polygalacturonase [Enterococcus faecium E1634]
gi|430589382|gb|ELB27511.1| polygalacturonase [Enterococcus faecium E1731]
gi|430604693|gb|ELB42128.1| polygalacturonase [Enterococcus faecium E2134]
gi|430605136|gb|ELB42541.1| polygalacturonase [Enterococcus faecium E2071]
gi|430609790|gb|ELB46967.1| polygalacturonase [Enterococcus faecium E2297]
gi|430616651|gb|ELB53546.1| polygalacturonase [Enterococcus faecium E2883]
gi|430628012|gb|ELB64470.1| polygalacturonase [Enterococcus faecium E1321]
gi|430632933|gb|ELB69123.1| polygalacturonase [Enterococcus faecium E1644]
gi|430633934|gb|ELB70079.1| polygalacturonase [Enterococcus faecium E2369]
gi|430639091|gb|ELB74973.1| polygalacturonase [Enterococcus faecium E4389]
gi|445189450|gb|AGE31092.1| Polygalacturonase [Enterococcus faecium NRRL B-2354]
Length = 445
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 94/284 (33%), Positives = 149/284 (52%), Gaps = 23/284 (8%)
Query: 24 HISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNR--TLKHTRGHLVELMNSNNILISN 81
+ S I+ ++ N+ +TG+ GT+DG G+ WW + N L + R L+ N + I + +
Sbjct: 86 YASCIYAQNVENISVTGF-GTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVKD 144
Query: 82 LTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLV 141
+ SP WTI+P+ C N +TIL P ++PNTDGIDP+S NV I +C+I+ GDD +
Sbjct: 145 IKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDCI 204
Query: 142 AVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAA 201
A+K+G + +A NI + + GV +GSEMSG I N+T+ +
Sbjct: 205 AIKAGTEDTYERIA--CENITITNCT-MVHGHGGVVLGSEMSGSIRNITISNCIFQETDR 261
Query: 202 GVRIKTDKGRGGYIENITIRNIKMERVKIPIRIS-------RGSNDHPDEGWDPKAL--- 251
G+R+K+ +GRGG +E+I + NI M+ V P ++ RG + W+ KA
Sbjct: 262 GIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYV---WEKKAYPID 318
Query: 252 ---PKIRGISFVNVVSVNT-TKAPVLAGIIGTQFEEICMKNVSL 291
P R I F N+ + N A + G+ +EI N+ +
Sbjct: 319 ERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDV 362
>gi|431472772|ref|ZP_19514500.1| polygalacturonase [Enterococcus faecium E1630]
gi|431761402|ref|ZP_19549976.1| polygalacturonase [Enterococcus faecium E3346]
gi|430583557|gb|ELB21919.1| polygalacturonase [Enterococcus faecium E1630]
gi|430621543|gb|ELB58304.1| polygalacturonase [Enterococcus faecium E3346]
Length = 445
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/284 (33%), Positives = 149/284 (52%), Gaps = 23/284 (8%)
Query: 24 HISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNR--TLKHTRGHLVELMNSNNILISN 81
+ S I+ ++ N+ +TG+ GT+DG G+ WW + N L + R L+ N + I + +
Sbjct: 86 YASCIYAQNVENISVTGF-GTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVKD 144
Query: 82 LTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLV 141
+ SP WTI+P+ C N +TIL P ++PNTDGIDP+S NV I +C+I+ GDD +
Sbjct: 145 IKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDCI 204
Query: 142 AVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAA 201
A+K+G + +A NI + + GV +GSEMSG I N+T+ +
Sbjct: 205 AIKAGTEDTYERIA--CENITITNCT-MVHGHGGVVLGSEMSGSIRNITISNCIFQETDR 261
Query: 202 GVRIKTDKGRGGYIENITIRNIKMERVKIPIRIS-------RGSNDHPDEGWDPKAL--- 251
G+R+K+ +GRGG +E+I + NI M+ V P ++ RG + W+ KA
Sbjct: 262 GIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYV---WEKKAYPID 318
Query: 252 ---PKIRGISFVNVVSVNT-TKAPVLAGIIGTQFEEICMKNVSL 291
P R I F N+ + N A + G+ +EI N+ +
Sbjct: 319 ERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDV 362
>gi|257883307|ref|ZP_05662960.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,502]
gi|294622157|ref|ZP_06701229.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium U0317]
gi|424791201|ref|ZP_18217679.1| polygalacturonase [Enterococcus faecium V689]
gi|424796708|ref|ZP_18222399.1| polygalacturonase [Enterococcus faecium S447]
gi|424949492|ref|ZP_18365160.1| polygalacturonase [Enterococcus faecium R496]
gi|424953665|ref|ZP_18368614.1| polygalacturonase [Enterococcus faecium R494]
gi|424956671|ref|ZP_18371436.1| polygalacturonase [Enterococcus faecium R446]
gi|424968083|ref|ZP_18381741.1| polygalacturonase [Enterococcus faecium P1140]
gi|424994459|ref|ZP_18406396.1| polygalacturonase [Enterococcus faecium ERV168]
gi|424998609|ref|ZP_18410283.1| polygalacturonase [Enterococcus faecium ERV165]
gi|425001105|ref|ZP_18412635.1| polygalacturonase [Enterococcus faecium ERV161]
gi|425005198|ref|ZP_18416463.1| polygalacturonase [Enterococcus faecium ERV102]
gi|425011663|ref|ZP_18422546.1| polygalacturonase [Enterococcus faecium E422]
gi|425017819|ref|ZP_18428304.1| polygalacturonase [Enterococcus faecium C621]
gi|425032259|ref|ZP_18437327.1| polygalacturonase [Enterococcus faecium 515]
gi|425039369|ref|ZP_18443912.1| polygalacturonase [Enterococcus faecium 513]
gi|431777897|ref|ZP_19566138.1| polygalacturonase [Enterococcus faecium E2560]
gi|431783614|ref|ZP_19571712.1| polygalacturonase [Enterococcus faecium E6012]
gi|431786798|ref|ZP_19574796.1| polygalacturonase [Enterococcus faecium E6045]
gi|257818965|gb|EEV46293.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,502]
gi|291598326|gb|EFF29415.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium U0317]
gi|402919867|gb|EJX40428.1| polygalacturonase [Enterococcus faecium V689]
gi|402922635|gb|EJX42996.1| polygalacturonase [Enterococcus faecium S447]
gi|402934197|gb|EJX53567.1| polygalacturonase [Enterococcus faecium R496]
gi|402938569|gb|EJX57565.1| polygalacturonase [Enterococcus faecium R494]
gi|402945367|gb|EJX63722.1| polygalacturonase [Enterococcus faecium R446]
gi|402952945|gb|EJX70709.1| polygalacturonase [Enterococcus faecium P1140]
gi|402980034|gb|EJX95667.1| polygalacturonase [Enterococcus faecium ERV168]
gi|402982456|gb|EJX97919.1| polygalacturonase [Enterococcus faecium ERV165]
gi|402987170|gb|EJY02259.1| polygalacturonase [Enterococcus faecium ERV102]
gi|402987432|gb|EJY02495.1| polygalacturonase [Enterococcus faecium ERV161]
gi|402995999|gb|EJY10409.1| polygalacturonase [Enterococcus faecium E422]
gi|403003645|gb|EJY17529.1| polygalacturonase [Enterococcus faecium C621]
gi|403013568|gb|EJY26654.1| polygalacturonase [Enterococcus faecium 515]
gi|403016115|gb|EJY28950.1| polygalacturonase [Enterococcus faecium 513]
gi|430638501|gb|ELB74432.1| polygalacturonase [Enterococcus faecium E2560]
gi|430644798|gb|ELB80379.1| polygalacturonase [Enterococcus faecium E6012]
gi|430644949|gb|ELB80513.1| polygalacturonase [Enterococcus faecium E6045]
Length = 445
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/284 (33%), Positives = 149/284 (52%), Gaps = 23/284 (8%)
Query: 24 HISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNR--TLKHTRGHLVELMNSNNILISN 81
+ S I+ ++ N+ +TG+ GT+DG G+ WW + N L + R L+ N + I + +
Sbjct: 86 YASCIYAQNVENISVTGF-GTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVKD 144
Query: 82 LTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLV 141
+ SP WTI+P+ C N +TIL P ++PNTDGIDP+S NV I +C+I+ GDD +
Sbjct: 145 IKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDCI 204
Query: 142 AVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAA 201
A+K+G + +A NI + + GV +GSEMSG I N+T+ +
Sbjct: 205 AIKAGTEDTYERIA--CENITITNCT-MVHGHGGVVLGSEMSGSIRNITISNCIFQETDR 261
Query: 202 GVRIKTDKGRGGYIENITIRNIKMERVKIPIRIS-------RGSNDHPDEGWDPKALP-- 252
G+R+K+ +GRGG +E+I + NI M+ V P ++ RG + W+ KA P
Sbjct: 262 GIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYV---WEKKAYPID 318
Query: 253 ----KIRGISFVNVVSVNT-TKAPVLAGIIGTQFEEICMKNVSL 291
R I F N+ + N A + G+ +EI N+ +
Sbjct: 319 ERTSAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDV 362
>gi|448621831|ref|ZP_21668580.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax
denitrificans ATCC 35960]
gi|445754861|gb|EMA06255.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax
denitrificans ATCC 35960]
Length = 512
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/295 (32%), Positives = 144/295 (48%), Gaps = 28/295 (9%)
Query: 28 IHGDHLTNVIITGYNGTIDGQGQMWWDL-----------WWNRTLKHTRGH--------- 67
+H NV ITG G IDG G WW+ R + G+
Sbjct: 87 LHVADAANVTITG-EGVIDGGGSYWWEFVSVPPEEYPPALAERLAEIRSGNKQDAVSTFT 145
Query: 68 ----LVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDS 123
L+++ N+ +S +T RNSPFW H VY +V + ++I P +APN DGID DS
Sbjct: 146 VRPPLLQIDGCENVTVSGVTLRNSPFWNTHVVYSEDVTVHDVSIQNPPDAPNGDGIDIDS 205
Query: 124 STNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMS 183
S V + D +I++GDD + +KSG D G + RP+ N++V + GV IGSE +
Sbjct: 206 SRFVRVSDTHIDAGDDAICLKSGKDEEGREVGRPTENVVVTNCT-VEHGHGGVVIGSETA 264
Query: 184 GGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPD 243
G + +VTV D G+RIK+ +GRGG +E++ I M RV P I+ D
Sbjct: 265 GDVRHVTVTNCTFTDTDRGIRIKSKRGRGGTVEDLRFDTIVMRRVACPFVINGYYQTDID 324
Query: 244 EGWDP--KALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAP 296
+P +A P +R + F ++ + A LAG+ +FE I +V + P
Sbjct: 325 SDPEPVTEATPNVRNVDFHHITAEEVESAAFLAGLPERRFEGISFTDVDIDATRP 379
>gi|448540079|ref|ZP_21623316.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-646]
gi|448552184|ref|ZP_21629848.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-645]
gi|448553851|ref|ZP_21630729.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-644]
gi|445709350|gb|ELZ61181.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-645]
gi|445709953|gb|ELZ61776.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-646]
gi|445719854|gb|ELZ71532.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-644]
Length = 516
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/295 (33%), Positives = 143/295 (48%), Gaps = 28/295 (9%)
Query: 28 IHGDHLTNVIITGYNGTIDGQGQMWWDL------WWNRTLKH------------------ 63
+H NV ITG G IDG G WW+ + L
Sbjct: 94 LHVADAANVTITG-EGVIDGGGSYWWEFVSVPPEQYPSELTERLEAIRSGNKQDAVSTFT 152
Query: 64 TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDS 123
R L+++ N+ +S +T RNSPFW H VY +V I ++I P +APN DGID DS
Sbjct: 153 VRPPLLQIDGCENVTVSGVTLRNSPFWNTHVVYSDDVTIHDVSIRNPPDAPNGDGIDIDS 212
Query: 124 STNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMS 183
S V + D +I++GDD + +KSG D G + RP+ N++V + GV IGSE +
Sbjct: 213 SRFVRVSDTHIDAGDDAICLKSGKDEEGREVGRPTENVVVTNCT-VEHGHGGVVIGSETA 271
Query: 184 GGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPD 243
G + +VTV D G+RIK+ +GRGG +E++ I M RV P I+ D
Sbjct: 272 GDVRHVTVTNCTFTDTDRGIRIKSKRGRGGTVEDLRFDTIVMRRVACPFVINGYYQTDID 331
Query: 244 EGWDP--KALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAP 296
+P +A P +R + F ++ + A LAG+ +FE I +V + P
Sbjct: 332 SDPEPVTEATPNVRNVDFHHITAEEVESAAFLAGLPEQRFEGISFTDVDIDATRP 386
>gi|167521696|ref|XP_001745186.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776144|gb|EDQ89764.1| predicted protein [Monosiga brevicollis MX1]
Length = 945
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/286 (35%), Positives = 148/286 (51%), Gaps = 42/286 (14%)
Query: 34 TNVIITGYNGTIDGQGQMWWDL--WWNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWT 91
+N+ ITG GTIDG G W L + N + + R L+ M + + +S+LT + FWT
Sbjct: 642 SNITITG-AGTIDGNGFSGWYLPPYLNGSFTN-RPMLIAPMWVDGLYLSDLTLTDPAFWT 699
Query: 92 IHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYG 151
+ P +C+NV I + I+ + PNTDG+DPDS NV +E CYI +GDD +A+KSG
Sbjct: 700 VAPAFCKNVHIHDLRIIT--SGPNTDGVDPDSCQNVLVERCYISTGDDCIAIKSGRGPQA 757
Query: 152 IAMARPSSNIIVRRVS------------GTTPTCS-----------GVGIGSEMSGGIFN 188
+A+ P++N+ +R V G+ C G+ IGSEMSGGI++
Sbjct: 758 LAINMPTANVTIRHVPQRVGRDYDATAIGSYALCRGQIRTDCTTGHGISIGSEMSGGIYD 817
Query: 189 VTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDP 248
V D L + GVR+KT GRGG + N+T RN+ ++ V + I++ N G
Sbjct: 818 VLFDNLTLSGTTNGVRVKTCMGRGGSVRNVTYRNMVIDSVDTAVLINQDYNSVTCVG--- 874
Query: 249 KALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGL 294
ALP I NV++ N A FE C+++ S GL
Sbjct: 875 DALPNFSDILVQNVIANNVKMA----------FELECLQDNSCAGL 910
>gi|375309358|ref|ZP_09774639.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus sp. Aloe-11]
gi|375078667|gb|EHS56894.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus sp. Aloe-11]
Length = 504
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/284 (34%), Positives = 148/284 (52%), Gaps = 23/284 (8%)
Query: 24 HISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWN--RTLKHTRGHLVELMNSNNILISN 81
H S I+G +L N+ +TG +G ++G GQ WW+ N L++ R L+ + I +
Sbjct: 141 HASCIYGQNLENISVTG-SGILEGNGQPWWEKHRNHPEELQYPRPKLISFDRCQRVTIKD 199
Query: 82 LTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLV 141
+ +NSP WTI+P+ C NV I ++IL P ++PNTDGI+P+S +NV I +C I+ GDD +
Sbjct: 200 IMLKNSPSWTINPIACYNVTIDNLSILNPADSPNTDGINPESCSNVRISNCNIDVGDDCI 259
Query: 142 AVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAA 201
A+K+G + +A NI + + GV +GSEMSG I NVT+
Sbjct: 260 AIKAGTEDTQERIA--CENITITNCT-MVHGHGGVVLGSEMSGDIRNVTISNCVFKQTDR 316
Query: 202 GVRIKTDKGRGGYIENITIRNIKMERVKIPIRIS-------RGSNDHPDEGWDPKALPK- 253
G+R+K+ +GRGG IE+I + NI ME V P ++ RG + + WD P
Sbjct: 317 GIRLKSRRGRGGIIEDIRVSNIVMEEVICPFILNLYYFCGPRGKDKYV---WDKNPYPVT 373
Query: 254 -----IRGISFVNVVSVNTTKAP-VLAGIIGTQFEEICMKNVSL 291
R I F ++ + A L G+ EI N+ +
Sbjct: 374 DETPCFRRIHFADITARQVHAAAGFLYGLAEQYIAEITFSNIDI 417
>gi|308069843|ref|YP_003871448.1| polygalacturonase [Paenibacillus polymyxa E681]
gi|305859122|gb|ADM70910.1| Polygalacturonase (Pectinase) (PGL) [Paenibacillus polymyxa E681]
Length = 453
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/284 (34%), Positives = 148/284 (52%), Gaps = 23/284 (8%)
Query: 24 HISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWN--RTLKHTRGHLVELMNSNNILISN 81
H S I+G++L N+ +TG +GT+DG GQ WW N L++ R L+ + I +
Sbjct: 90 HASCIYGENLENISVTG-SGTLDGNGQPWWQKHRNHPEELQYPRPKLISFDRCQRVTIKD 148
Query: 82 LTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLV 141
+ +NSP WT++P+ C NV I ++IL P ++PNTDGI+P+S +NV I +C I+ GDD +
Sbjct: 149 VMLKNSPSWTVNPIACYNVTIDNLSILNPADSPNTDGINPESCSNVRISNCNIDVGDDCI 208
Query: 142 AVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAA 201
A+K+G + + P NI + + V +GSEMSG I NVT+
Sbjct: 209 AIKAGTEDTQERI--PCENITITNCT-MVHGHGAVVLGSEMSGDIRNVTISNCVFKQTDR 265
Query: 202 GVRIKTDKGRGGYIENITIRNIKMERVKIPIRIS-------RGSNDHPDEGWDPK----- 249
G+R+K+ +GRGG IE+I + NI ME V P ++ RG + + WD
Sbjct: 266 GIRLKSRRGRGGTIEDIRVSNIVMEDVICPFILNLYYFCGPRGKDKYV---WDKNPYPIT 322
Query: 250 -ALPKIRGISFVNVVSVNTTKAP-VLAGIIGTQFEEICMKNVSL 291
P R I F ++ + A L G+ EI N+ +
Sbjct: 323 DETPCFRRIHFSDITARQVHAAAGFLYGLAEQYIAEITFSNIDI 366
>gi|116620373|ref|YP_822529.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116223535|gb|ABJ82244.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 446
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 100/298 (33%), Positives = 153/298 (51%), Gaps = 29/298 (9%)
Query: 24 HISLIHGDHLTNVIITGYNGTIDGQGQMWWDL--WWNR-----------------TLKHT 64
+ SLI+ D ++ I G GTIDGQGQ WW W +R L++
Sbjct: 106 YSSLIYADGAVHITIRG-RGTIDGQGQAWWKRMGWPDRRKIAPEQRTAAERAELAKLEYG 164
Query: 65 RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSS 124
R H+++L+ S +++I L NS WT++P+ C V I G+TI P+ +PNTDGI+P+S
Sbjct: 165 RPHMIKLVRSKHVVIEGLHLINSASWTVNPLLCEFVRIDGITIENPVPSPNTDGINPESC 224
Query: 125 TNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSG 184
NV I + I+ GDD V +KSG D G + RP NI + V IGSEMSG
Sbjct: 225 RNVQILNSRIDVGDDCVTLKSGKDEAGRRVGRPDENITITNCV-MLKGHGAVTIGSEMSG 283
Query: 185 GIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISR--GSNDHP 242
G+ NV V G+R+K+ +GRGG +E + N+ M+ V ++ D P
Sbjct: 284 GVRNVVVSNCVFQGTDVGIRVKSQRGRGGIVEGFVVSNVVMQDVASAFTLTSFYAGTDKP 343
Query: 243 DEGWD-PKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAK 299
+ + + P++R F N+ T + AG I T +E+ ++N++ G+ A+
Sbjct: 344 GDLFPVGEGTPRLRDFRFSNI----TARGSKTAGQI-TGLKEMPIENITFTGVRIQAE 396
>gi|261207232|ref|ZP_05921921.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium TC 6]
gi|289567172|ref|ZP_06447562.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium D344SRF]
gi|294614352|ref|ZP_06694269.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1636]
gi|430850281|ref|ZP_19468044.1| polygalacturonase [Enterococcus faecium E1185]
gi|260078860|gb|EEW66562.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium TC 6]
gi|289161031|gb|EFD08941.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium D344SRF]
gi|291592824|gb|EFF24416.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1636]
gi|430535906|gb|ELA76297.1| polygalacturonase [Enterococcus faecium E1185]
Length = 445
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 93/280 (33%), Positives = 147/280 (52%), Gaps = 23/280 (8%)
Query: 28 IHGDHLTNVIITGYNGTIDGQGQMWWDLWWNR--TLKHTRGHLVELMNSNNILISNLTFR 85
I+ ++ N+ +TG+ GT+DG G+ WW + N L + R L+ N + I + ++
Sbjct: 90 IYAQNVENISVTGF-GTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVKDIKLI 148
Query: 86 NSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKS 145
SP WTI+P+ C N +TIL P ++PNTDGIDP+S NV I +C+I+ GDD +A+K+
Sbjct: 149 QSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDCIAIKA 208
Query: 146 GWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRI 205
G + +A NI + + GV +GSEMSG I N+T+ + G+R+
Sbjct: 209 GTEDTYERIA--CENITITNCT-MVHGHGGVVLGSEMSGSIRNITISNCIFQETDRGIRL 265
Query: 206 KTDKGRGGYIENITIRNIKMERVKIPIRIS-------RGSNDHPDEGWDPKAL------P 252
K+ +GRGG +E+I + NI M+ V P ++ RG + W+ KA P
Sbjct: 266 KSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYV---WEKKAYPIDERTP 322
Query: 253 KIRGISFVNVVSVNT-TKAPVLAGIIGTQFEEICMKNVSL 291
R I F N+ + N A + G+ +EI N+ +
Sbjct: 323 AFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDV 362
>gi|431753622|ref|ZP_19542291.1| polygalacturonase [Enterococcus faecium E2620]
gi|430611655|gb|ELB48732.1| polygalacturonase [Enterococcus faecium E2620]
Length = 445
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 93/284 (32%), Positives = 149/284 (52%), Gaps = 23/284 (8%)
Query: 24 HISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNR--TLKHTRGHLVELMNSNNILISN 81
+ S I+ ++ N+ +TG+ GT+DG G+ WW+ + N L + R L+ N + I + +
Sbjct: 86 YASCIYAQNVENISVTGF-GTLDGNGKKWWNTFRNEPDNLAYPRPKLMSFHNCHRITVKD 144
Query: 82 LTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLV 141
+ SP WTI+P+ C N +TIL P ++PNTDGIDP+S NV I +C+I+ GDD +
Sbjct: 145 IKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDCI 204
Query: 142 AVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAA 201
A+K+G + +A NI + + GV +GSEMSG I N+T+ +
Sbjct: 205 AIKAGTEDTYERIA--CENITITNCT-MVHGHGGVVLGSEMSGSIRNITISNCIFQETDR 261
Query: 202 GVRIKTDKGRGGYIENITIRNIKMERVKIPIRIS-------RGSNDHPDEGWDPKAL--- 251
G+R+K+ +GRGG +E+I + NI M+ V P ++ RG + W+ A
Sbjct: 262 GIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYV---WEKTAYPID 318
Query: 252 ---PKIRGISFVNVVSVNT-TKAPVLAGIIGTQFEEICMKNVSL 291
P R I F N+ + N A + G+ +EI N+ +
Sbjct: 319 ERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDV 362
>gi|448567657|ref|ZP_21637582.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax prahovense
DSM 18310]
gi|445711655|gb|ELZ63445.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax prahovense
DSM 18310]
Length = 549
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/295 (33%), Positives = 143/295 (48%), Gaps = 28/295 (9%)
Query: 28 IHGDHLTNVIITGYNGTIDGQGQMWWDL----------WWNRTLKHTRGH---------- 67
+H +NV ITG G IDG G WW+ L+ R
Sbjct: 131 LHVADASNVTITG-EGIIDGGGSYWWEFVSLPPEQYPSELAARLEEIRSGNQQDEVSTFT 189
Query: 68 ----LVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDS 123
L+++ N+ +S +T RNSPFW H VY +V I ++I P +APN DGID DS
Sbjct: 190 VRPPLLQIDGCENVTVSGVTLRNSPFWNTHVVYSDDVTIHDVSIQNPPDAPNGDGIDIDS 249
Query: 124 STNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMS 183
S V + D +I++GDD + +KSG D G + RP+ N++V + GV IGSE +
Sbjct: 250 SRFVRVSDTHIDAGDDAICLKSGKDEQGREVGRPTENVVVTNCT-VEHGHGGVVIGSETA 308
Query: 184 GGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPD 243
G + +VTV D G+RIK+ +GRGG +E++ I M RV P I+ D
Sbjct: 309 GDVRHVTVTNCTFTDTDRGIRIKSKRGRGGTVEDLRFDTIIMRRVACPFVINGYYQTDID 368
Query: 244 EGWDP--KALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAP 296
P +A P +R + F ++ + A LAG+ +FE I +V + P
Sbjct: 369 SDPKPVTEATPNVRNVDFHHITAEEVESAAFLAGLPEQRFEGISFTDVDIDATRP 423
>gi|89098529|ref|ZP_01171412.1| hypothetical protein B14911_09967 [Bacillus sp. NRRL B-14911]
gi|89086774|gb|EAR65892.1| hypothetical protein B14911_09967 [Bacillus sp. NRRL B-14911]
Length = 443
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/258 (35%), Positives = 140/258 (54%), Gaps = 22/258 (8%)
Query: 24 HISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNR--TLKHTRGHLVELMNSNNILISN 81
+ S + + N+ +TG+ GTIDG G WWD++ NR LK+ R L+ + +I + +
Sbjct: 88 YASCLFAEGARNIAVTGF-GTIDGNGMEWWDVFRNRREELKYPRPKLISFDHCEHITLRD 146
Query: 82 LTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLV 141
+ NSP WT++P+ CR++ + ++IL P ++PNTDGIDP+S NV I +C+I+ GDD +
Sbjct: 147 VRLINSPSWTVNPICCRDITVDNVSILNPADSPNTDGIDPESCRNVRISNCHIDVGDDCI 206
Query: 142 AVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAA 201
A+KSG + +A NI + + V GSEMSG I NVT+ D
Sbjct: 207 AIKSGTEDTEERVA--CENITITNCT-MVHGHGAVVFGSEMSGDIRNVTISNCVFQDTDR 263
Query: 202 GVRIKTDKGRGGYIENITIRNIKMERVKIPIRIS-------RGSNDHPDEGWDPK----- 249
G+R K+ +GRGG +E++ + NI ME V P I+ RG + + WD
Sbjct: 264 GIRFKSRRGRGGVVEDVRVDNIVMEGVICPFIINLYYFCGPRGKDQYV---WDKNPYPVT 320
Query: 250 -ALPKIRGISFVNVVSVN 266
P R + F N+ + N
Sbjct: 321 AETPMFRRLHFANITARN 338
>gi|431050714|ref|ZP_19493383.1| polygalacturonase [Enterococcus faecium E1590]
gi|431764029|ref|ZP_19552575.1| polygalacturonase [Enterococcus faecium E3548]
gi|430560252|gb|ELA99556.1| polygalacturonase [Enterococcus faecium E1590]
gi|430621333|gb|ELB58100.1| polygalacturonase [Enterococcus faecium E3548]
Length = 445
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 93/284 (32%), Positives = 148/284 (52%), Gaps = 23/284 (8%)
Query: 24 HISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNR--TLKHTRGHLVELMNSNNILISN 81
+ S I+ ++ N+ +TG+ GT+DG G+ WW + N L + R L+ N + I + +
Sbjct: 86 YASCIYAQNVENISVTGF-GTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVKD 144
Query: 82 LTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLV 141
+ SP WTI+P+ C N +TIL P ++PNTDGIDP+S NV I +C+I+ GDD +
Sbjct: 145 IKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDCI 204
Query: 142 AVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAA 201
A+K+G + +A NI + + GV +GSEMSG I N+T+ +
Sbjct: 205 AIKAGTEDTYERIA--CENITITNCT-MVHGHGGVVLGSEMSGSIRNITISNCIFQETDR 261
Query: 202 GVRIKTDKGRGGYIENITIRNIKMERVKIPIRIS-------RGSNDHPDEGWDPKAL--- 251
G+R+K+ +GRGG +E+I + NI M+ V P ++ RG + W+ A
Sbjct: 262 GIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYV---WEKTAYPID 318
Query: 252 ---PKIRGISFVNVVSVNT-TKAPVLAGIIGTQFEEICMKNVSL 291
P R I F N+ + N A + G+ +EI N+ +
Sbjct: 319 ERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDV 362
>gi|430821816|ref|ZP_19440403.1| polygalacturonase [Enterococcus faecium E0045]
gi|430830077|ref|ZP_19448143.1| polygalacturonase [Enterococcus faecium E0269]
gi|430921162|ref|ZP_19485329.1| polygalacturonase [Enterococcus faecium E1575]
gi|431703882|ref|ZP_19525108.1| polygalacturonase [Enterococcus faecium E1904]
gi|431766532|ref|ZP_19555009.1| polygalacturonase [Enterococcus faecium E4215]
gi|430438088|gb|ELA48576.1| polygalacturonase [Enterococcus faecium E0045]
gi|430479132|gb|ELA56406.1| polygalacturonase [Enterococcus faecium E0269]
gi|430554055|gb|ELA93727.1| polygalacturonase [Enterococcus faecium E1575]
gi|430596728|gb|ELB34544.1| polygalacturonase [Enterococcus faecium E1904]
gi|430626092|gb|ELB62680.1| polygalacturonase [Enterococcus faecium E4215]
Length = 445
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 93/284 (32%), Positives = 148/284 (52%), Gaps = 23/284 (8%)
Query: 24 HISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNR--TLKHTRGHLVELMNSNNILISN 81
+ S I+ ++ N+ +TG+ GT+DG G+ WW + N L + R L+ N + I + +
Sbjct: 86 YASCIYAQNVENISVTGF-GTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVKD 144
Query: 82 LTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLV 141
+ SP WTI+P+ C N +TIL P ++PNTDGIDP+S NV I +C+I+ GDD +
Sbjct: 145 IKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDCI 204
Query: 142 AVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAA 201
A+K+G + +A NI + + GV +GSEMSG I N+T+ +
Sbjct: 205 AIKAGTEDTYERIA--CENITITNCT-MVHGHGGVVLGSEMSGSIRNITISNCIFQETDR 261
Query: 202 GVRIKTDKGRGGYIENITIRNIKMERVKIPIRIS-------RGSNDHPDEGWDPKAL--- 251
G+R+K+ +GRGG +E+I + NI M+ V P ++ RG + W+ A
Sbjct: 262 GIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYV---WEKTAYPID 318
Query: 252 ---PKIRGISFVNVVSVNT-TKAPVLAGIIGTQFEEICMKNVSL 291
P R I F N+ + N A + G+ +EI N+ +
Sbjct: 319 ERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDV 362
>gi|425055000|ref|ZP_18458495.1| polygalacturonase [Enterococcus faecium 505]
gi|403034850|gb|EJY46272.1| polygalacturonase [Enterococcus faecium 505]
Length = 445
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 93/284 (32%), Positives = 148/284 (52%), Gaps = 23/284 (8%)
Query: 24 HISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNR--TLKHTRGHLVELMNSNNILISN 81
+ S I+ ++ N+ +TG+ GT+DG G+ WW + N L + R L+ N + I + +
Sbjct: 86 YASCIYAQNVENISVTGF-GTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVKD 144
Query: 82 LTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLV 141
+ SP WTI+P+ C N +TIL P ++PNTDGIDP+S NV I +C+I+ GDD +
Sbjct: 145 IKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDCI 204
Query: 142 AVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAA 201
A+K+G + +A NI + + GV +GSEMSG I N+T+ +
Sbjct: 205 AIKAGTEDTYERIA--CENITITNCT-MVHGHGGVVLGSEMSGSIRNITISNCIFQETDR 261
Query: 202 GVRIKTDKGRGGYIENITIRNIKMERVKIPIRIS-------RGSNDHPDEGWDPKAL--- 251
G+R+K+ +GRGG +E+I + NI M+ V P ++ RG + W+ A
Sbjct: 262 GIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYV---WEKTAYPID 318
Query: 252 ---PKIRGISFVNVVSVNT-TKAPVLAGIIGTQFEEICMKNVSL 291
P R I F N+ + N A + G+ +EI N+ +
Sbjct: 319 ERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDV 362
>gi|227550311|ref|ZP_03980360.1| pectin lyase [Enterococcus faecium TX1330]
gi|257897632|ref|ZP_05677285.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium Com12]
gi|293379031|ref|ZP_06625184.1| polygalacturonase (pectinase) [Enterococcus faecium PC4.1]
gi|424764556|ref|ZP_18191976.1| polygalacturonase [Enterococcus faecium TX1337RF]
gi|431758788|ref|ZP_19547411.1| polygalacturonase [Enterococcus faecium E3083]
gi|227180571|gb|EEI61543.1| pectin lyase [Enterococcus faecium TX1330]
gi|257834197|gb|EEV60618.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium Com12]
gi|292642310|gb|EFF60467.1| polygalacturonase (pectinase) [Enterococcus faecium PC4.1]
gi|402419039|gb|EJV51323.1| polygalacturonase [Enterococcus faecium TX1337RF]
gi|430616603|gb|ELB53499.1| polygalacturonase [Enterococcus faecium E3083]
Length = 445
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 93/284 (32%), Positives = 148/284 (52%), Gaps = 23/284 (8%)
Query: 24 HISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNR--TLKHTRGHLVELMNSNNILISN 81
+ S I+ ++ N+ +TG+ GT+DG G+ WW + N L + R L+ N + I + +
Sbjct: 86 YASCIYAQNVENISVTGF-GTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVKD 144
Query: 82 LTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLV 141
+ SP WTI+P+ C N +TIL P ++PNTDGIDP+S NV I +C+I+ GDD +
Sbjct: 145 IKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDCI 204
Query: 142 AVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAA 201
A+K+G + +A NI + + GV +GSEMSG I N+T+ +
Sbjct: 205 AIKAGTEDTYERIA--CENITITNCT-MVHGHGGVVLGSEMSGSIRNITISNCIFQETDR 261
Query: 202 GVRIKTDKGRGGYIENITIRNIKMERVKIPIRIS-------RGSNDHPDEGWDPKAL--- 251
G+R+K+ +GRGG +E+I + NI M+ V P ++ RG + W+ A
Sbjct: 262 GIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYV---WEKTAYPID 318
Query: 252 ---PKIRGISFVNVVSVNT-TKAPVLAGIIGTQFEEICMKNVSL 291
P R I F N+ + N A + G+ +EI N+ +
Sbjct: 319 ERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDV 362
>gi|390453172|ref|ZP_10238700.1| polygalacturonase [Paenibacillus peoriae KCTC 3763]
Length = 453
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 96/284 (33%), Positives = 148/284 (52%), Gaps = 23/284 (8%)
Query: 24 HISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWN--RTLKHTRGHLVELMNSNNILISN 81
H S I+G +L N+ +TG +G ++G GQ WW+ N L++ R L+ + I +
Sbjct: 90 HASCIYGQNLENISVTG-SGILEGNGQPWWEKHRNHPEDLQYPRPKLISFDRCQRVTIKD 148
Query: 82 LTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLV 141
+ +NSP WT++P+ C NV I ++IL P ++PNTDGI+P+S +NV I +C I+ GDD +
Sbjct: 149 VMLKNSPSWTVNPIACYNVTIDNLSILNPADSPNTDGINPESCSNVRISNCNIDVGDDCI 208
Query: 142 AVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAA 201
A+K+G + +A NI + + GV +GSEMSG I NVT+
Sbjct: 209 AIKAGTEDTQERIA--CENITITNCT-MVHGHGGVVLGSEMSGDIRNVTISNCVFKQTDR 265
Query: 202 GVRIKTDKGRGGYIENITIRNIKMERVKIPIRIS-------RGSNDHPDEGWDPK----- 249
G+R+K+ +GRGG IE+I + NI ME V P ++ RG + + WD
Sbjct: 266 GIRLKSRRGRGGIIEDIRVSNIVMEEVICPFILNLYYFCGPRGKDKYV---WDKNPYPVT 322
Query: 250 -ALPKIRGISFVNVVSVNTTKAP-VLAGIIGTQFEEICMKNVSL 291
P R I F ++ + A L G+ EI N+ +
Sbjct: 323 DETPSFRRIHFSDITARQVHAAAGFLYGLAEQYIAEITFSNIDI 366
>gi|293571108|ref|ZP_06682148.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E980]
gi|431739345|ref|ZP_19528280.1| polygalacturonase [Enterococcus faecium E1972]
gi|291608838|gb|EFF38120.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E980]
gi|430596073|gb|ELB33930.1| polygalacturonase [Enterococcus faecium E1972]
Length = 445
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 93/284 (32%), Positives = 148/284 (52%), Gaps = 23/284 (8%)
Query: 24 HISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNR--TLKHTRGHLVELMNSNNILISN 81
+ S I+ ++ N+ +TG+ GT+DG G+ WW + N L + R L+ N + I + +
Sbjct: 86 YASCIYAQNVENISVTGF-GTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVKD 144
Query: 82 LTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLV 141
+ SP WTI+P+ C N +TIL P ++PNTDGIDP+S NV I +C+I+ GDD +
Sbjct: 145 IKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDCI 204
Query: 142 AVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAA 201
A+K+G + +A NI + + GV +GSEMSG I N+T+ +
Sbjct: 205 AIKAGTEDTYERIA--CENITITNCT-MVHGHGGVVLGSEMSGSIRNITISNCIFQETDR 261
Query: 202 GVRIKTDKGRGGYIENITIRNIKMERVKIPIRIS-------RGSNDHPDEGWDPKAL--- 251
G+R+K+ +GRGG +E+I + NI M+ V P ++ RG + W+ A
Sbjct: 262 GIRLKSRRGRGGNVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYV---WEKTAYPID 318
Query: 252 ---PKIRGISFVNVVSVNT-TKAPVLAGIIGTQFEEICMKNVSL 291
P R I F N+ + N A + G+ +EI N+ +
Sbjct: 319 ERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDV 362
>gi|374376429|ref|ZP_09634087.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
gi|373233269|gb|EHP53064.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
Length = 517
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 100/285 (35%), Positives = 148/285 (51%), Gaps = 43/285 (15%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWD---------------LWWNRTLKH-------- 63
L + + + N+ ITG G IDG G+ WWD L ++R K+
Sbjct: 113 LFYANGVENIAITG-RGVIDGHGKKWWDFVEGYKEGQPRTKWQLEFDRRNKNILLPDDPR 171
Query: 64 --TRGHL----VELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAP-LNAPNT 116
RG L ++ ++S NILI + RNSPFWTI+P +C NV + +TI P NAPNT
Sbjct: 172 QMKRGFLRPPFIQFLHSKNILIEGIMIRNSPFWTINPGFCENVTVHAVTINNPGSNAPNT 231
Query: 117 DGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGV 176
DGI+P+S +NV I DC+I GDD + +KSG D G + RP+ N + + GV
Sbjct: 232 DGINPESCSNVHISDCHISVGDDCITIKSGKDIPGRSKNRPAENYTITNCT-MLRGHGGV 290
Query: 177 GIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIE-----NITIRNIKMERVKIP 231
IGSEMSGG+ + + G+RIKT +GRGG +E NI ++NI + + +
Sbjct: 291 VIGSEMSGGVKKIAISNCIFDGTDRGIRIKTARGRGGVVEDIRVSNIVMKNIAEQAIVLD 350
Query: 232 IRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGI 276
+ ++G+ + E P R I N+ + T +A ++ GI
Sbjct: 351 MEYAKGAEEPVSE-----RTPTFRNIRLSNITAY-TNQALLINGI 389
>gi|430842911|ref|ZP_19460818.1| polygalacturonase [Enterococcus faecium E1007]
gi|431064168|ref|ZP_19493515.1| polygalacturonase [Enterococcus faecium E1604]
gi|431131393|ref|ZP_19498944.1| polygalacturonase [Enterococcus faecium E1613]
gi|431602171|ref|ZP_19522547.1| polygalacturonase [Enterococcus faecium E1861]
gi|431742395|ref|ZP_19531288.1| polygalacturonase [Enterococcus faecium E2039]
gi|430492622|gb|ELA68986.1| polygalacturonase [Enterococcus faecium E1007]
gi|430565953|gb|ELB05076.1| polygalacturonase [Enterococcus faecium E1613]
gi|430568809|gb|ELB07839.1| polygalacturonase [Enterococcus faecium E1604]
gi|430589939|gb|ELB28031.1| polygalacturonase [Enterococcus faecium E1861]
gi|430600153|gb|ELB37811.1| polygalacturonase [Enterococcus faecium E2039]
Length = 445
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 93/284 (32%), Positives = 148/284 (52%), Gaps = 23/284 (8%)
Query: 24 HISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNR--TLKHTRGHLVELMNSNNILISN 81
+ S I+ ++ N+ +TG+ GT+DG G+ WW + N L + R L+ N + I + +
Sbjct: 86 YASCIYAQNVENISVTGF-GTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVKD 144
Query: 82 LTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLV 141
+ SP WTI+P+ C N +TIL P ++PNTDGIDP+S NV I +C+I+ GDD +
Sbjct: 145 IKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDCI 204
Query: 142 AVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAA 201
A+K+G + +A NI + + GV +GSEMSG I N+T+ +
Sbjct: 205 AIKAGTEDTYERIA--CENITITNCT-MVHGHGGVVLGSEMSGSIRNITISNCIFQETDR 261
Query: 202 GVRIKTDKGRGGYIENITIRNIKMERVKIPIRIS-------RGSNDHPDEGWDPKAL--- 251
G+R+K+ +GRGG +E+I + NI M+ V P ++ RG + W+ A
Sbjct: 262 GIRLKSRRGRGGNVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYV---WEKTAYPID 318
Query: 252 ---PKIRGISFVNVVSVNT-TKAPVLAGIIGTQFEEICMKNVSL 291
P R I F N+ + N A + G+ +EI N+ +
Sbjct: 319 ERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDV 362
>gi|292494258|ref|YP_003533401.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax volcanii
DS2]
gi|448289466|ref|ZP_21480637.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax volcanii
DS2]
gi|291369174|gb|ADE01404.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax volcanii
DS2]
gi|445582547|gb|ELY36888.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax volcanii
DS2]
Length = 549
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 99/295 (33%), Positives = 142/295 (48%), Gaps = 28/295 (9%)
Query: 28 IHGDHLTNVIITGYNGTIDGQGQMWW---DLWWNRTLKHTRGHLVELMNSN--------- 75
+H +NV ITG G IDG G WW L + L E+ + N
Sbjct: 131 LHVADASNVTITG-EGVIDGGGSYWWVFVSLPPEQYPSELAARLEEIRSGNQQDEVSTFT 189
Query: 76 ------------NILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDS 123
N+ +S +T RNSPFW H VY +V I ++I P +APN DGID DS
Sbjct: 190 VRPPLLQIDGCENVTVSGVTLRNSPFWNTHVVYSDDVTIHDVSIQNPPDAPNGDGIDIDS 249
Query: 124 STNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMS 183
S V + D +I++GDD + +KSG D G + RP+ N++V + GV IGSE +
Sbjct: 250 SRFVRVSDTHIDAGDDAICLKSGKDEQGREVGRPTENVVVTNCT-VEHGHGGVVIGSETA 308
Query: 184 GGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPD 243
G + +VTV D G+RIK+ +GRGG +E++ I M RV P I+ D
Sbjct: 309 GDVRHVTVTNCTFTDTDRGIRIKSKRGRGGTVEDLRFDTIIMRRVACPFVINGYYQTDID 368
Query: 244 EGWDP--KALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAP 296
P +A P +R + F ++ + A LAG+ +FE I +V + P
Sbjct: 369 SDPKPVTEATPNVRNVDFHHITAEEVESAAFLAGLPEQRFEGISFTDVDIDATRP 423
>gi|430860956|ref|ZP_19478551.1| polygalacturonase [Enterococcus faecium E1573]
gi|430551274|gb|ELA91043.1| polygalacturonase [Enterococcus faecium E1573]
Length = 445
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 93/284 (32%), Positives = 148/284 (52%), Gaps = 23/284 (8%)
Query: 24 HISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNR--TLKHTRGHLVELMNSNNILISN 81
+ S I+ ++ N+ +TG+ GT+DG + WW + N L + R L+ N + I + +
Sbjct: 86 YASCIYAQNVENISVTGF-GTLDGNEKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVKD 144
Query: 82 LTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLV 141
+ SP WTI+P+ C N +TIL P ++PNTDGIDP+S NV I +C+I+ GDD +
Sbjct: 145 IKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDCI 204
Query: 142 AVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAA 201
A+K+G + +A NI + + GV +GSEMSG I N+T+ +
Sbjct: 205 AIKAGTEDTYERIA--CENITITNCT-MVHGHGGVVLGSEMSGSIRNITISNCIFQETDR 261
Query: 202 GVRIKTDKGRGGYIENITIRNIKMERVKIPIRIS-------RGSNDHPDEGWDPKAL--- 251
G+R+K+ +GRGG +E+I + NI M+ V P ++ RG + W+ KA
Sbjct: 262 GIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYV---WEKKAYPID 318
Query: 252 ---PKIRGISFVNVVSVNT-TKAPVLAGIIGTQFEEICMKNVSL 291
P R I F N+ + N A + G+ +EI N+ +
Sbjct: 319 ERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDV 362
>gi|294617477|ref|ZP_06697109.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1679]
gi|291596284|gb|EFF27545.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1679]
Length = 363
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 93/284 (32%), Positives = 148/284 (52%), Gaps = 23/284 (8%)
Query: 24 HISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNR--TLKHTRGHLVELMNSNNILISN 81
+ S I+ ++ N+ +TG+ GT+DG G+ WW + N L + R L+ N + I + +
Sbjct: 86 YASCIYAQNVENISVTGF-GTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVKD 144
Query: 82 LTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLV 141
+ SP WTI+P+ C N +TIL P ++PNTDGIDP+S NV I +C+I+ GDD +
Sbjct: 145 IKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDCI 204
Query: 142 AVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAA 201
A+K+G + +A NI + + GV +GSEMSG I N+T+ +
Sbjct: 205 AIKAGTEDTYERIA--CENITITNCT-MVHGHGGVVLGSEMSGSIRNITISNCIFQETDR 261
Query: 202 GVRIKTDKGRGGYIENITIRNIKMERVKIPIRIS-------RGSNDHPDEGWDPKAL--- 251
G+R+K+ +GRGG +E+I + NI M+ V P ++ RG + W+ A
Sbjct: 262 GIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYV---WEKTAYPID 318
Query: 252 ---PKIRGISFVNVVSVNT-TKAPVLAGIIGTQFEEICMKNVSL 291
P R I F N+ + N A + G+ +EI N+ +
Sbjct: 319 ERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDV 362
>gi|257070016|ref|YP_003156271.1| endopolygalacturonase [Brachybacterium faecium DSM 4810]
gi|256560834|gb|ACU86681.1| endopolygalacturonase [Brachybacterium faecium DSM 4810]
Length = 431
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/213 (40%), Positives = 120/213 (56%), Gaps = 16/213 (7%)
Query: 29 HGDHLTNVIITGYNGTIDGQGQMWWDLWWNR--TLKHTRGHLVELMNSNNILISNLTFRN 86
HG+ +V ITG GTIDG GQ WWD + +R L H R L+ L + I ++ RN
Sbjct: 94 HGER--DVAITGL-GTIDGGGQTWWDTFRHRREELAHPRPTLIGLHECERVTIRDVALRN 150
Query: 87 SPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSG 146
SP WT+HP C +V + + I P +PNTDGIDP+S NV I DC+I+ GDD +A+K+G
Sbjct: 151 SPAWTVHPSLCEDVTLTNLHIHNPAESPNTDGIDPESCRNVRISDCHIDVGDDCIALKAG 210
Query: 147 WDHYGIAMARPSSNIIVRRVSGTTPTC----SGVGIGSEMSGGIFNVTVDQLHVWDAAAG 202
+ R + V+ T T GV IGSEMSGG+ NV + A G
Sbjct: 211 TE-------RTPDRVATENVTITGCTMVRGHGGVVIGSEMSGGVRNVVISNCVFQGADRG 263
Query: 203 VRIKTDKGRGGYIENITIRNIKMERVKIPIRIS 235
+R+KT + RGG +EN+ + I M+ V P+ ++
Sbjct: 264 IRLKTRRDRGGTVENVRVSTIVMDDVLCPLTVN 296
>gi|392950256|ref|ZP_10315813.1| endopolygalacturonase, glycosyl hydrolases family 28 [Lactobacillus
pentosus KCA1]
gi|392434538|gb|EIW12505.1| endopolygalacturonase, glycosyl hydrolases family 28 [Lactobacillus
pentosus KCA1]
Length = 427
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/281 (37%), Positives = 155/281 (55%), Gaps = 26/281 (9%)
Query: 26 SLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRT--LKHTRGHLVELMNSNNILISNLT 83
+ ++G HL V ITG G +DGQG+ WW + + L++ R +L + +S ++I N+T
Sbjct: 93 ACLYGSHLKRVKITG-EGVVDGQGKKWWRRFDEKAAELEYPRPYLCSIEHSEQVVIENVT 151
Query: 84 FRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAV 143
F NSP WT+HP C NV I +T++ P N+PNTDG+DP+S N+ I +C + GDD +A+
Sbjct: 152 FVNSPAWTLHPFDCENVAINNVTVVNPKNSPNTDGLDPESCRNIRIANCCFDVGDDCIAI 211
Query: 144 KSGWDHYGIAMARPSSNIIV---RRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAA 200
KSG + ++A NII+ V G GV GSEMSG I NVT+ D
Sbjct: 212 KSGTEDASQSIA--CENIIISGCNMVHGH----GGVVFGSEMSGDIRNVTISNCVFQDTD 265
Query: 201 AGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISR----GSNDHPDEGWDPKAL----- 251
G+R KT +GRGG I I++ NI M+ V P+ I+ G + W +AL
Sbjct: 266 RGIRFKTRRGRGGRISGISVNNIVMDNVLCPLIINSYYFCGKRGNEAYVWTKEALPVDER 325
Query: 252 -PKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 291
PK+ +SF ++++ N AG I E+ + NV+L
Sbjct: 326 TPKLSNLSFSHLIATNIRSC---AGFI-YGLPEMAISNVTL 362
>gi|257889036|ref|ZP_05668689.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,141,733]
gi|257825099|gb|EEV52022.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,141,733]
Length = 445
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/284 (32%), Positives = 148/284 (52%), Gaps = 23/284 (8%)
Query: 24 HISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNR--TLKHTRGHLVELMNSNNILISN 81
+ S I+ ++ N+ +TG+ GT+DG G+ WW+ + N L + R L+ N + I + +
Sbjct: 86 YASCIYAQNVENISVTGF-GTLDGNGKKWWNTFRNEPDNLAYPRPKLMSFHNCHRITVKD 144
Query: 82 LTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLV 141
+ SP WTI+P+ C N +TIL P ++PNTDGIDP+S NV I +C+I+ GDD +
Sbjct: 145 IKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDCI 204
Query: 142 AVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAA 201
A+K+G + +A NI + + GV +GSEMSG I N+T+ +
Sbjct: 205 AIKAGTEDTYERIA--CENITITNCT-MVHGHGGVVLGSEMSGSIRNITISNCIFQETDR 261
Query: 202 GVRIKTDKGRGGYIENITIRNIKMERVKIPIRIS-------RGSNDHPDEGWDPKAL--- 251
G+R+K+ +GRGG +E+I + NI M+ V ++ RG + W+ A
Sbjct: 262 GIRLKSRRGRGGIVEDIRVSNIVMDNVMCSFILNLYYFCGPRGKEPYV---WEKTAYPID 318
Query: 252 ---PKIRGISFVNVVSVNT-TKAPVLAGIIGTQFEEICMKNVSL 291
P R I F N+ + N A + G+ +EI N+ +
Sbjct: 319 ERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDV 362
>gi|374324810|ref|YP_005077939.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus terrae HPL-003]
gi|357203819|gb|AET61716.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus terrae HPL-003]
Length = 476
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/284 (33%), Positives = 147/284 (51%), Gaps = 23/284 (8%)
Query: 24 HISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWN--RTLKHTRGHLVELMNSNNILISN 81
H S I+G +L N+ +TG +GT+DG GQ WW+ L++ R L+ + I +
Sbjct: 113 HASCIYGQNLENISVTG-SGTLDGNGQPWWEKHRKHPEELQYPRPKLISFDRCQRVTIKD 171
Query: 82 LTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLV 141
+ +NSP WT++P+ C NV I ++IL P ++PNTDGI+P+S +NV I +C I+ GDD +
Sbjct: 172 VMLKNSPSWTVNPIACYNVTIDNVSILNPTDSPNTDGINPESCSNVRISNCNIDVGDDCI 231
Query: 142 AVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAA 201
A+K+G + + P NI + + V +GSEMSG I NVT+
Sbjct: 232 AIKAGTEDTQERI--PCENITITNCT-MVHGHGAVVLGSEMSGDIRNVTISNCVFKQTDR 288
Query: 202 GVRIKTDKGRGGYIENITIRNIKMERVKIPIRIS-------RGSNDHPDEGWDPKALPK- 253
G+R+K+ +GRGG +E+I + NI ME V P ++ RG + + WD P
Sbjct: 289 GIRLKSRRGRGGIVEDIRVSNIVMEDVICPFILNLYYFCGPRGKDKYV---WDKNPYPIT 345
Query: 254 -----IRGISFVNVVSVNTTKAP-VLAGIIGTQFEEICMKNVSL 291
R I F ++ + A L G+ EI N+ +
Sbjct: 346 DETPCFRRIHFSDITARQVHAAAGFLYGLAEQYIAEITFSNIDI 389
>gi|325570664|ref|ZP_08146390.1| polygalacturonase [Enterococcus casseliflavus ATCC 12755]
gi|325156510|gb|EGC68690.1| polygalacturonase [Enterococcus casseliflavus ATCC 12755]
Length = 438
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 93/282 (32%), Positives = 148/282 (52%), Gaps = 19/282 (6%)
Query: 24 HISLIHGDHLTNVIITGYNGTIDGQGQMWWDLW-WNR-TLKHTRGHLVELMNSNNILISN 81
+ S ++ ++ N+ +TG G +DGQGQ WW + NR L + R L+ + I + +
Sbjct: 88 YASCLYAENAENIAVTGL-GMLDGQGQRWWKTFRENREQLAYPRPKLISFDSCQQITLKD 146
Query: 82 LTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLV 141
+ +SP WT++P+ C+N+ I + I P ++PNTDGIDP+S NV I +C+I+ GDD +
Sbjct: 147 IRLVDSPSWTVNPILCQNLTIDNLRIKNPADSPNTDGIDPESCKNVRISNCHIDVGDDCI 206
Query: 142 AVKSGWDHYGIAMARPSSNII-VRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAA 200
A+KSG + +A + I+ + G V +GSEMSG I NVT+ D
Sbjct: 207 AIKSGTEDTKERVACENITIVNCHMLHGH----GAVVLGSEMSGDIRNVTISNCIFQDTD 262
Query: 201 AGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISR----GSNDHPDEGWDP------KA 250
GVR+K+ +GRGG IE+I + NI M+ V P ++ G WD +
Sbjct: 263 RGVRLKSRRGRGGTIEDIRVNNIVMDNVICPFTLNLYYFCGPKGKEKYVWDKNPYPITEE 322
Query: 251 LPKIRGISFVNVVSVNTTKAPVLAGIIGTQF-EEICMKNVSL 291
P R I F N+ + N A + QF +I +++++
Sbjct: 323 TPHFRRIHFANISARNVHAAAGFVYGLAEQFISDITFQDIAV 364
>gi|338730196|ref|YP_004659588.1| glycoside hydrolase family 28 [Thermotoga thermarum DSM 5069]
gi|335364547|gb|AEH50492.1| glycoside hydrolase family 28 [Thermotoga thermarum DSM 5069]
Length = 515
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 101/281 (35%), Positives = 147/281 (52%), Gaps = 20/281 (7%)
Query: 26 SLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKHT--RGHLVELMNSNNILISNLT 83
SL+ G + NV I G G ID + D W+N +K R + L NILI +T
Sbjct: 180 SLVTGIGVENVRIIG-QGVIDANAN-FDDWWFNPKVKRIAWRPRSIFLNRCKNILIEGIT 237
Query: 84 FRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAV 143
RNSP WT+HP++C+++ + + I+ P N+PNTDGI+P+S +NV I C I GDD VAV
Sbjct: 238 IRNSPSWTVHPLFCKDLKLLTLNIVNPKNSPNTDGINPESCSNVLIAGCRISVGDDCVAV 297
Query: 144 KSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGV 203
K+G PS NI +R V IGSEMS G+ NV V + G+
Sbjct: 298 KAGKYEVKQKFDVPSENIEIRNCL-MEHGHGAVVIGSEMSCGVRNVKVSNCLFVNTDRGL 356
Query: 204 RIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDP------------KAL 251
RIKT + RGGY++ I ++N++M V +P+ I+ N D +DP +
Sbjct: 357 RIKTRRERGGYVDEIELKNVQMNGVFVPLAINCFYNCGAD--YDPLYSSDKVVADVNERT 414
Query: 252 PKIRGISFVNVVSVNT-TKAPVLAGIIGTQFEEICMKNVSL 291
P I I NV+ + + A + G+ + E+I M+NV +
Sbjct: 415 PTIGSIVMKNVLCEDVKSMAAFVYGLPEKKIEKIYMENVRI 455
>gi|430827435|ref|ZP_19445578.1| polygalacturonase [Enterococcus faecium E0164]
gi|430444043|gb|ELA53955.1| polygalacturonase [Enterococcus faecium E0164]
Length = 445
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 92/284 (32%), Positives = 147/284 (51%), Gaps = 23/284 (8%)
Query: 24 HISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNR--TLKHTRGHLVELMNSNNILISN 81
+ S I+ ++ N+ +TG+ GT+DG G+ WW + N L + R L+ N + I + +
Sbjct: 86 YASCIYAQNVENISVTGF-GTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVKD 144
Query: 82 LTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLV 141
+ SP WTI+P+ C N +TIL P ++PNTDGIDP+S NV I + +I+ GDD +
Sbjct: 145 IKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNYHIDVGDDCI 204
Query: 142 AVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAA 201
A+K+G + +A NI + + GV +GSEMSG I N+T+ +
Sbjct: 205 AIKAGTEDTYERIA--CENITITNCT-MVHGHGGVVLGSEMSGSIRNITISNCIFQETDR 261
Query: 202 GVRIKTDKGRGGYIENITIRNIKMERVKIPIRIS-------RGSNDHPDEGWDPKAL--- 251
G+R+K+ +GRGG +E+I + NI M+ V P ++ RG + W+ A
Sbjct: 262 GIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYV---WEKTAYPID 318
Query: 252 ---PKIRGISFVNVVSVNT-TKAPVLAGIIGTQFEEICMKNVSL 291
P R I F N+ + N A + G+ +EI N+ +
Sbjct: 319 ERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDV 362
>gi|420264265|ref|ZP_14766898.1| polygalacturonase [Enterococcus sp. C1]
gi|394768641|gb|EJF48547.1| polygalacturonase [Enterococcus sp. C1]
Length = 438
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/282 (32%), Positives = 148/282 (52%), Gaps = 19/282 (6%)
Query: 24 HISLIHGDHLTNVIITGYNGTIDGQGQMWWDLW-WNR-TLKHTRGHLVELMNSNNILISN 81
+ S ++ ++ N+ +TG G +DGQGQ WW + NR L + R L+ + I + +
Sbjct: 88 YASCLYAENAENIAVTGL-GMLDGQGQRWWKTFRENREQLAYPRPKLISFDSCQQITLKD 146
Query: 82 LTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLV 141
+ +SP WT++P+ C+N+ I + I P ++PNTDGIDP+S NV I +C+I+ GDD +
Sbjct: 147 IRLVDSPSWTVNPILCQNLTIDNLRIKNPADSPNTDGIDPESCKNVRISNCHIDVGDDCI 206
Query: 142 AVKSGWDHYGIAMARPSSNII-VRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAA 200
A+KSG + +A + I+ + G V +GSEMSG I NVT+ D
Sbjct: 207 AIKSGTEDTKERVACENITIVNCHMLHGH----GAVVLGSEMSGDIRNVTISNCIFQDTD 262
Query: 201 AGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISR----GSNDHPDEGWDP------KA 250
G+R+K+ +GRGG IE+I + NI M+ V P ++ G WD +
Sbjct: 263 RGIRLKSRRGRGGTIEDIRVNNIVMDNVICPFTLNLYYFCGPKGKEKYVWDKNPYPITEE 322
Query: 251 LPKIRGISFVNVVSVNTTKAPVLAGIIGTQF-EEICMKNVSL 291
P R I F N+ + N A + QF +I +++++
Sbjct: 323 TPHFRRIHFANISARNVHAAAGFVYGLAEQFISDITFQDIAV 364
>gi|109509140|gb|ABG34279.1| polygalacturonase [Eucalyptus globulus subsp. globulus]
Length = 201
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/181 (45%), Positives = 112/181 (61%), Gaps = 12/181 (6%)
Query: 147 WDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIK 206
WD YGI+ RPS+NI++R + + +G+ IGSEMSGG+ NVTV+ L VWD+ VRIK
Sbjct: 1 WDEYGISYKRPSTNILIRNLVVRSMVSAGISIGSEMSGGVSNVTVENLPVWDSRRAVRIK 60
Query: 207 TDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVN 266
T GRGGY+++IT RNI E V++ I I N+HPDEG+D KA P ++ ISF+ V
Sbjct: 61 TAPGRGGYVQDITYRNITFENVRVGIVIKTDYNEHPDEGYDRKAFPILQRISFIGVHG-Q 119
Query: 267 TTKAPVLAGIIGTQFEEICMKNVSL----LGLAPSAK--WQCQFVSG-FTSQVFPLPCPQ 319
+ PV I G+ EEI ++NV+ +GL K +QC FV G +FP PC
Sbjct: 120 GVRVPVR--IHGS--EEIPVRNVTFQDMSVGLTYKKKHIFQCAFVQGRVIGSIFPAPCEN 175
Query: 320 L 320
L
Sbjct: 176 L 176
>gi|255532707|ref|YP_003093079.1| glycoside hydrolase family protein [Pedobacter heparinus DSM 2366]
gi|255345691|gb|ACU05017.1| glycoside hydrolase family 28 [Pedobacter heparinus DSM 2366]
Length = 542
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/308 (33%), Positives = 154/308 (50%), Gaps = 48/308 (15%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDL------------W------WNRTL------- 61
L + N+ ITG G IDG G+ WWD W NR +
Sbjct: 131 LFYAYKAENIAITG-RGIIDGHGKKWWDFVEGYKADQPRSKWQYMFDDLNREILLPDDPK 189
Query: 62 KHTRGHL----VELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLN-APNT 116
+ RG L ++ M N+ I +T RNSPFWT++P +C NV I +TI P + APNT
Sbjct: 190 QMKRGFLRPPFIQTMYCKNVFIEGITIRNSPFWTVNPEFCENVTIHAVTINNPGSFAPNT 249
Query: 117 DGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGV 176
DGI+P+S NV I +C+I GDD + +KSG D G MA P+ N + + + GV
Sbjct: 250 DGINPESCNNVHISNCHISVGDDCITIKSGKDAPGRKMAAPAQNYTITNCTMLSGH-GGV 308
Query: 177 GIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIE-----NITIRNIKMERVKIP 231
IGSEMSG + +++ G+RIK+ +GRGG +E NI ++NIK + + +
Sbjct: 309 VIGSEMSGDVRKISISNCVFDGTDRGIRIKSARGRGGIVEEIRVDNIIMKNIKQQAIVLD 368
Query: 232 IRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 291
++ ++ + + E P+ R I F N+ +A L G+ EE+ ++N+S
Sbjct: 369 LQYAKTTLEPVSE-----RTPRFRNIHFSNITG-QVNEAAYLNGL-----EEMPIENISF 417
Query: 292 LGLAPSAK 299
+ AK
Sbjct: 418 NDINMEAK 425
>gi|257867957|ref|ZP_05647610.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC30]
gi|257874287|ref|ZP_05653940.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC10]
gi|257802040|gb|EEV30943.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC30]
gi|257808451|gb|EEV37273.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC10]
Length = 438
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 91/282 (32%), Positives = 148/282 (52%), Gaps = 19/282 (6%)
Query: 24 HISLIHGDHLTNVIITGYNGTIDGQGQMWWDLW-WNR-TLKHTRGHLVELMNSNNILISN 81
+ S ++ ++ N+ +TG G +DGQGQ WW + NR L + R L+ + I + +
Sbjct: 88 YASCLYAENAENIAVTGL-GMLDGQGQRWWKTFRENREQLAYPRPKLISFDSCQQITLKD 146
Query: 82 LTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLV 141
+ +SP WT++P+ C+++ I + I P ++PNTDGIDP+S NV I +C+I+ GDD +
Sbjct: 147 IRLVDSPSWTVNPILCQDLTIDNLRIKNPADSPNTDGIDPESCKNVRISNCHIDVGDDCI 206
Query: 142 AVKSGWDHYGIAMARPSSNII-VRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAA 200
A+KSG + +A + I+ + G V +GSEMSG I NVT+ D
Sbjct: 207 AIKSGTEDTKERVACENITIVNCHMLHGH----GAVVLGSEMSGDIRNVTISNCIFQDTD 262
Query: 201 AGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISR----GSNDHPDEGWDP------KA 250
G+R+K+ +GRGG IE+I + NI M+ V P ++ G WD +
Sbjct: 263 RGIRLKSRRGRGGTIEDIRVNNIVMDNVICPFTLNLYYFCGPKGKEKYVWDKNPYPITEE 322
Query: 251 LPKIRGISFVNVVSVNTTKAPVLAGIIGTQF-EEICMKNVSL 291
P R I F N+ + N A + QF +I +++++
Sbjct: 323 TPHFRRIHFANISARNVHAAAGFVYGLAEQFISDITFQDIAV 364
>gi|257876852|ref|ZP_05656505.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC20]
gi|257811018|gb|EEV39838.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC20]
Length = 438
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 91/282 (32%), Positives = 148/282 (52%), Gaps = 19/282 (6%)
Query: 24 HISLIHGDHLTNVIITGYNGTIDGQGQMWWDLW-WNR-TLKHTRGHLVELMNSNNILISN 81
+ S ++ ++ N+ +TG G +DGQGQ WW + NR L + R L+ + I + +
Sbjct: 88 YASCLYAENAENIAVTGL-GMLDGQGQRWWKTFRENREQLAYPRPKLISFDSCQQITLKD 146
Query: 82 LTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLV 141
+ +SP WT++P+ C+++ I + I P ++PNTDGIDP+S NV I +C+I+ GDD +
Sbjct: 147 IRLVDSPSWTVNPILCQDLTIDNLRIKNPADSPNTDGIDPESCKNVRISNCHIDVGDDCI 206
Query: 142 AVKSGWDHYGIAMARPSSNII-VRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAA 200
A+KSG + +A + I+ + G V +GSEMSG I NVT+ D
Sbjct: 207 AIKSGTEDTKERVACENITIVNCHMLHGH----GAVVLGSEMSGDIRNVTISNCIFQDTD 262
Query: 201 AGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISR----GSNDHPDEGWDP------KA 250
G+R+K+ +GRGG IE+I + NI M+ V P ++ G WD +
Sbjct: 263 RGIRLKSRRGRGGTIEDIRVNNIVMDNVICPFTLNLYYFCGPKGKEKYVWDKNPYPITEE 322
Query: 251 LPKIRGISFVNVVSVNTTKAPVLAGIIGTQF-EEICMKNVSL 291
P R I F N+ + N A + QF +I +++++
Sbjct: 323 TPHFRRIHFANISARNVHAAAGFVYGLAEQFISDITFQDIAV 364
>gi|289578915|ref|YP_003477542.1| glycoside hydrolase family protein [Thermoanaerobacter italicus
Ab9]
gi|289528628|gb|ADD02980.1| glycoside hydrolase family 28 [Thermoanaerobacter italicus Ab9]
Length = 519
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 101/278 (36%), Positives = 142/278 (51%), Gaps = 18/278 (6%)
Query: 26 SLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNR-TLKHT--RGHLVELMNSNNILISNL 82
SLI G ++ NV I G GTIDG ++ WW +K R V L NILI L
Sbjct: 185 SLITGINIENVNIIG-EGTIDGNAN--FETWWKEHKIKKGAWRPRTVFLNQCKNILIEGL 241
Query: 83 TFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVA 142
T +NSP WTIHP N+ +TI P N+PNTDG++P++S NV I C GDD +A
Sbjct: 242 TIKNSPAWTIHPFQSENLKFINLTIENPQNSPNTDGLNPEASKNVLILGCKFSVGDDCIA 301
Query: 143 VKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAG 202
+KSG + + + + VR GV IGSEMSGG+ V V++ + G
Sbjct: 302 IKSGKFDMAQKLGKLTEKVFVRNCY-MEYGHGGVVIGSEMSGGVKEVYVEKCIFNNTDRG 360
Query: 203 VRIKTDKGRGGYIENITIRNIKMERVKIPIRISR----GSNDHPDEGWDPKAL------P 252
+RIKT +GRGG+I+ I I+M RVK P I+ S+ + W + L P
Sbjct: 361 IRIKTRRGRGGFIDEIHADKIRMNRVKTPFTINSFYFCDSDGKTEYVWSKEKLPIDKRTP 420
Query: 253 KIRGISFVNVVSVNT-TKAPVLAGIIGTQFEEICMKNV 289
I I ++ NT A + G+ + E++ M+N+
Sbjct: 421 YIGNIYLKDIGCTNTQVAAGFMYGLPERKIEKVIMENI 458
>gi|339499261|ref|YP_004697296.1| polygalacturonase [Spirochaeta caldaria DSM 7334]
gi|338833610|gb|AEJ18788.1| Polygalacturonase [Spirochaeta caldaria DSM 7334]
Length = 467
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 140/290 (48%), Gaps = 45/290 (15%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLWWN---------------------------- 58
LI N+ I G +G IDG G+ WW+ W
Sbjct: 94 LIFASKAENITIAG-SGHIDGNGEPWWNSLWQAKAEKRTHPKYPYELQLADLNKDYRNQP 152
Query: 59 -----RTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNA 113
R L+ R L++ +N NI + N+T +NSPFW H +C + I G+ + P A
Sbjct: 153 SGGGGRELQFLRPPLIQFLNCKNITLQNVTLQNSPFWNTHFAFCSDCTITGVHFINPKEA 212
Query: 114 PNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTC 173
PNTDG++ DS +++ I++C + GDD + +KSG GI + RP+ NI++ +
Sbjct: 213 PNTDGLNIDSCSSITIQNCTFDVGDDCLGLKSGSGEDGIRINRPTENILIDSCTMKNGH- 271
Query: 174 SGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIR 233
GV IGSE +GGI N+ + + + G+RIKT +GRGG IENI + + M+ + P+
Sbjct: 272 GGVVIGSETAGGINNIKITNCSMEETDRGLRIKTRRGRGGVIENIRLEHCYMKNILCPLV 331
Query: 234 IS------RGSNDHPDEGWDPKAL----PKIRGISFVNVVSVNTTKAPVL 273
++ + P DP+ L PKI+ I ++++ + A
Sbjct: 332 VNCYYGPGGPKSSSPIFSLDPQPLSATTPKIQNIYISHLIAEHCRAAAAF 381
>gi|269957316|ref|YP_003327105.1| glycoside hydrolase family 28 [Xylanimonas cellulosilytica DSM
15894]
gi|269305997|gb|ACZ31547.1| glycoside hydrolase family 28 [Xylanimonas cellulosilytica DSM
15894]
Length = 459
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/253 (34%), Positives = 139/253 (54%), Gaps = 18/253 (7%)
Query: 52 WWDLWWNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPL 111
WW+ + TL H R LV L ++ + ++T R+SP WT+HP+ C +V ++ +TI+ P
Sbjct: 123 WWEAFRAGTLAHPRPTLVGLHRCTHVRLRDVTLRSSPAWTVHPLLCDDVAVRDVTIVNPP 182
Query: 112 NAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTP 171
++PNTDGIDP+S NV I C+I+ GDD +A+K+G + +A N++ V+G T
Sbjct: 183 DSPNTDGIDPESCRNVRISGCHIDVGDDCIALKAGTEASPERVA--CENVV---VTGCTL 237
Query: 172 T--CSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVK 229
GV +GSEMSGGI NV V G+R+K +GRGG +E++ + N+ M+ V
Sbjct: 238 VHGHGGVVLGSEMSGGIRNVVVADCVFQGTDRGIRLKARRGRGGVVEDVRVSNVVMDDVG 297
Query: 230 IPIRISRGSNDHP--------DEGWDP--KALPKIRGISFVNVVSVNTTKAPVLA-GIIG 278
P+ +++ + P D G P P R I+ +V + N A V A G+
Sbjct: 298 CPLVLNQHYDRGPGGDSPHVGDRGALPVDATTPLFRRITVAHVSARNVRAAAVFALGLAE 357
Query: 279 TQFEEICMKNVSL 291
E+ + +V++
Sbjct: 358 QPVAELVLDDVAV 370
>gi|356494975|ref|XP_003516356.1| PREDICTED: uncharacterized protein LOC100783583 [Glycine max]
Length = 1470
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/115 (59%), Positives = 88/115 (76%)
Query: 10 LPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKHTRGHLV 69
L SYGRGR+ GR SLI G +LT+VIITGYNGTIDGQG WWD + LK TR +++
Sbjct: 1075 LYSYGRGRDAPDGRFSSLIFGTNLTDVIITGYNGTIDGQGCYWWDKFHKGELKLTRPYMI 1134
Query: 70 ELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSS 124
E+M S++I ISNLT NSP W +HP+Y +++I+G+TILAP+++PNTDGIDP S
Sbjct: 1135 EIMFSDHIQISNLTLINSPSWFVHPIYTSDIIIQGLTILAPVDSPNTDGIDPGDS 1189
>gi|383155085|gb|AFG59707.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
Length = 138
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/134 (50%), Positives = 97/134 (72%), Gaps = 1/134 (0%)
Query: 130 EDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNV 189
EDCY+ +GDD +A+KSGWD YGI+ RPSSNIIVRR++ +TP SG+ IGSEMSGGI ++
Sbjct: 1 EDCYVSNGDDGIAIKSGWDEYGISFNRPSSNIIVRRITISTP-FSGIAIGSEMSGGIRDI 59
Query: 190 TVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDPK 249
V+ + ++ + G+R+KT+ GRGG I NIT +I ++ V I+ S + DHPD ++P
Sbjct: 60 LVENISIYSSTVGIRVKTNVGRGGIIRNITFSHIYLDNVGTGIKFSGNTGDHPDARYNPM 119
Query: 250 ALPKIRGISFVNVV 263
ALP + I+ +NVV
Sbjct: 120 ALPVVGDIAVLNVV 133
>gi|325972835|ref|YP_004249026.1| polygalacturonase [Sphaerochaeta globus str. Buddy]
gi|324028073|gb|ADY14832.1| Polygalacturonase [Sphaerochaeta globus str. Buddy]
Length = 453
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 149/305 (48%), Gaps = 46/305 (15%)
Query: 37 IITGYNGTIDGQGQMWWDLWWNRTLKHT-------------------------------- 64
+I G IDG GQ WWD +
Sbjct: 101 LIVRGEGIIDGNGQWWWDTAHKKRTTQKGPVSAMENELSRLNPGYERQSGGGGGRQSQFL 160
Query: 65 RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSS 124
R LV+++NSNN+ + LT +NSPFWT+HP+Y N++ + +L P +APNTDGID DS
Sbjct: 161 RPPLVQILNSNNVKLEGLTLQNSPFWTLHPLYSTNLIFMDLKVLNPKDAPNTDGIDVDSC 220
Query: 125 TNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSG 184
V I+ C ++ GDD +A+KSG G+A +P+++I++ + G IGSE +
Sbjct: 221 RFVTIKKCLVDVGDDGIALKSGSGPDGVATNKPTTDILIEECT-VKSAHGGAVIGSETAA 279
Query: 185 GIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISR----GSND 240
GI +V V G+RIKT +GRGG I N+ +++M+ P+ ++ GS D
Sbjct: 280 GIRDVRVHDCLFDGTDRGIRIKTRRGRGGAISNLHFSSVRMKNNLCPLTLNMYYRCGSLD 339
Query: 241 HPDEGWDPKAL----PKIRGISFVNVVSVN-TTKAPVLAGIIGTQFEEICMKN----VSL 291
D + ++ P I G++ + S + T+ A + G+ + ++ ++N V+
Sbjct: 340 PQDFSLEKLSITDTTPSIEGVTIEDCYSEDFTSSAAFIVGLPESPIRDLVIRNCTFTVAK 399
Query: 292 LGLAP 296
GL P
Sbjct: 400 TGLTP 404
>gi|317474867|ref|ZP_07934137.1| glycosyl hydrolase family 28 [Bacteroides eggerthii 1_2_48FAA]
gi|316909005|gb|EFV30689.1| glycosyl hydrolase family 28 [Bacteroides eggerthii 1_2_48FAA]
Length = 445
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 103/324 (31%), Positives = 156/324 (48%), Gaps = 59/324 (18%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLW------------------------------ 56
LI+ N+ I G G +DGQG+ WW +
Sbjct: 113 LIYATDAENITIKG-EGKLDGQGKAWWKEFFRVLIDLRDNGKRDINKYQPLFEQANDMKT 171
Query: 57 --------WNRTL--KHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMT 106
W+ TL + R ++L+ N+ I +T NSPFWT++P +C NV +KG+T
Sbjct: 172 LYAETNVDWHSTLDRRFLRPPFIQLLRCRNVRIEGITIVNSPFWTVNPNFCDNVTVKGVT 231
Query: 107 ILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRV 166
I + +PNTDGI+P+S +NV I DC+I GDD + +KSG D + RP NI +
Sbjct: 232 I-NNVPSPNTDGINPESCSNVHISDCHISVGDDCITIKSGRDLQARKIGRPCENITITNC 290
Query: 167 SGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRN---- 222
+ + GV IGSEMSGG+ VT+ G+RIK+ +GRGG +E+I + N
Sbjct: 291 TMLSGH-GGVVIGSEMSGGVKKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMS 349
Query: 223 -IKMERVKIPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPV-LAGIIGTQ 280
IK E V + ++ S+ + E P R I FV ++V T+ P+ + G+
Sbjct: 350 DIKREAVVLNLKYSQMKMEKKSE-----RTPVFRNI-FVTGLTVRGTQTPLKVDGLPEAP 403
Query: 281 FEEICMKNVSLLGLAPSAKWQCQF 304
E I +++ + AK +C F
Sbjct: 404 IEGIVFRDIYV----NDAKEECLF 423
>gi|409099480|ref|ZP_11219504.1| glycoside hydrolase family protein [Pedobacter agri PB92]
Length = 530
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 100/302 (33%), Positives = 143/302 (47%), Gaps = 38/302 (12%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDL-----------WWNRTL-------------- 61
L + N+ I G G IDG G+ WWD W
Sbjct: 121 LFYAYKAENISIIG-RGLIDGHGKKWWDFVEGYKEGQARSKWQYEFDKLNKDIVLPDDPK 179
Query: 62 KHTRGHL----VELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTD 117
+ RG L ++ M N+LI +T RNSPFWT++P + NV I +TI P ++PNTD
Sbjct: 180 QMKRGFLRPPFIQTMFCKNVLIDGITIRNSPFWTVNPEFSENVKIHAVTINNP-HSPNTD 238
Query: 118 GIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVG 177
GI+P+S NV I DC+I GDD + +KSG D G MA P+ N ++ + GV
Sbjct: 239 GINPESCKNVHISDCHISVGDDCITIKSGKDEPGRRMAIPAENYVITNCT-MLSGHGGVV 297
Query: 178 IGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRG 237
IGSEMSG + +T+ G+RIKT +GRGG +E I + NI M+ +K +
Sbjct: 298 IGSEMSGDVRKITISNCVFDGTDRGIRIKTARGRGGIVEEIRVSNIIMKDIKQQAIVLDM 357
Query: 238 SNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPS 297
+ PK R I F N+ +A L G+ EE+ ++N++ +
Sbjct: 358 QYAKTNVQPVSDRTPKFRNIHFSNITG-QVNQAAYLNGL-----EEMPIENITFNDINME 411
Query: 298 AK 299
AK
Sbjct: 412 AK 413
>gi|255642114|gb|ACU21323.1| unknown [Glycine max]
Length = 203
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 64/105 (60%), Positives = 81/105 (77%)
Query: 60 TLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGI 119
T +HTR +L+ELM S+NI ISNLT NSP W +HPVY N++++G+TI AP+ +PNTDGI
Sbjct: 95 TRRHTRPYLIELMFSDNIQISNLTLLNSPSWNVHPVYSSNIIVQGITIYAPVTSPNTDGI 154
Query: 120 DPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVR 164
+PDS TNV IEDCYI SGDD VAVKSGWD YGI P+ +++
Sbjct: 155 NPDSCTNVRIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIE 199
>gi|325106104|ref|YP_004275758.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324974952|gb|ADY53936.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 1277
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 152/289 (52%), Gaps = 36/289 (12%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLW---------------------WNRTL--KH 63
LI+ + N+ ITG G ++GQG W +NR KH
Sbjct: 140 LIYAYQVENIAITG-KGILNGQGSKNIANWKPEQKKDQALIRKMGREGAPVYNRLFGEKH 198
Query: 64 T-RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
R +E +N NILI + ++ FW IHP+ C NV ++ ++I + NA N+DG DP+
Sbjct: 199 KLRPAFIEPLNCRNILIEGVRIIDATFWVIHPIGCNNVTVRNVSIDS-FNA-NSDGFDPE 256
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S+TN +E+C+ +GDD +A+KSG D G + +P+ NIIVR S SGV IGSE+
Sbjct: 257 STTNALVENCHFRTGDDGIAIKSGRDQDGWRIGQPTENIIVRN-STFESLASGVCIGSEI 315
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGG+ NV ++ + + A+ + K++ RGGY+EN IRN+ M+ V IR P
Sbjct: 316 SGGVRNVFIENIKIPKASNAIYFKSNLDRGGYMENTWIRNVNMDSVGTAIRFD------P 369
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 291
D + K R +F + ++N A +GI F+++ + NV+L
Sbjct: 370 DYKSESKENYATRFNNFT-IENINCAYAS-RSGIEVNGFKDMPITNVAL 416
>gi|357452825|ref|XP_003596689.1| Exo-poly-alpha-D-galacturonosidase [Medicago truncatula]
gi|355485737|gb|AES66940.1| Exo-poly-alpha-D-galacturonosidase [Medicago truncatula]
Length = 238
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 72/133 (54%), Positives = 89/133 (66%), Gaps = 15/133 (11%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
+WP++DP PSYGRGRE GG H SLI+G +LT+VIITG NGTIDGQ +WW
Sbjct: 115 DWPVVDPPPSYGRGRELPGGWHRSLIYGCNLTDVIITGNNGTIDGQRSIWW--------- 165
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+E MNS N+LISN+TF NSPFWT+H VYC +V ++ +TILAP PNTDGID
Sbjct: 166 ------IESMNSKNVLISNVTFLNSPFWTMHHVYCSHVTVQNVTILAPFGLPNTDGIDSY 219
Query: 123 SSTNVCIEDCYIE 135
S ++ YI
Sbjct: 220 SLIMYALKTGYIS 232
>gi|392939365|ref|ZP_10305009.1| endopolygalacturonase [Thermoanaerobacter siderophilus SR4]
gi|392291115|gb|EIV99558.1| endopolygalacturonase [Thermoanaerobacter siderophilus SR4]
Length = 519
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 96/262 (36%), Positives = 135/262 (51%), Gaps = 14/262 (5%)
Query: 26 SLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNR-TLKHT--RGHLVELMNSNNILISNL 82
SLI G ++ NV I G GTIDG ++ WW +K R V L NILI +
Sbjct: 185 SLITGINIENVNIIG-EGTIDGNAN--FETWWKEHKIKKGAWRPRTVFLNQCKNILIEGV 241
Query: 83 TFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVA 142
T +NSP WTIHP N+ +TI P N+PNTDG++P++S NV I C GDD +A
Sbjct: 242 TIKNSPAWTIHPFQSENLKFINLTIENPKNSPNTDGLNPEASKNVLILGCKFSVGDDCIA 301
Query: 143 VKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAG 202
+K+G + + + + VR GV IGSEMSGG+ V V++ + G
Sbjct: 302 IKAGKFDMAQKLGKLTEKVFVRNCYMEYGH-GGVVIGSEMSGGVKEVYVEKCIFNNTDRG 360
Query: 203 VRIKTDKGRGGYIENITIRNIKMERVKIPIRISR----GSNDHPDEGWDPKALP---KIR 255
+RIKT +GRGG+I+ I I+M RVK P I+ + + W + LP +
Sbjct: 361 IRIKTRRGRGGFIDEIHADKIRMNRVKTPFTINSFYFCDVDGKTEYVWSKEKLPIDERTP 420
Query: 256 GISFVNVVSVNTTKAPVLAGII 277
I + + ++N T V AG I
Sbjct: 421 YIGNIYLKNINCTDTQVAAGFI 442
>gi|399889206|ref|ZP_10775083.1| glycoside hydrolase family protein [Clostridium arbusti SL206]
Length = 756
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 140/266 (52%), Gaps = 17/266 (6%)
Query: 41 YNGTIDGQGQMWWDLWWNR------TLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHP 94
YNG LWW+ T + R ++L+N + +LI + +NSP WTIHP
Sbjct: 288 YNGDKSTAVNFDMGLWWDNPKATDPTKQTARPRTIQLINCDGVLIQGVKVQNSPSWTIHP 347
Query: 95 VYCRNVVIKGMTIL---APLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYG 151
+Y +N+ I + + +P+++PNTDG+DPDS N+ + + + GDD +A+KSG D G
Sbjct: 348 LYSKNITIADVNVKNPSSPVDSPNTDGLDPDSVDNLLVVNTTFDVGDDCIAIKSGKDAEG 407
Query: 152 IAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAA-GVRIKTDKG 210
+ PSSNI +R S GV +GSEMSGGI N+ + ++D+ GVR+KT +G
Sbjct: 408 RKIGIPSSNITIRN-SLMLHGHGGVTLGSEMSGGINNINIKD-DIFDSTNIGVRLKTLRG 465
Query: 211 RGGYIE-----NITIRNIKMERVKIPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSV 265
RGG I+ NI ++NI + I S P G + P I+ + F N+ ++
Sbjct: 466 RGGVIQDVVFDNIMMKNISSDAFNINSNYSSNGAPLPYTGVVDETTPTIKNLVFKNITAI 525
Query: 266 NTTKAPVLAGIIGTQFEEICMKNVSL 291
+A G+ + + + N+++
Sbjct: 526 GAKEASFFQGLQEMPVDGVTLSNINV 551
>gi|361067449|gb|AEW08036.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155067|gb|AFG59698.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155071|gb|AFG59700.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
Length = 138
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 67/134 (50%), Positives = 97/134 (72%), Gaps = 1/134 (0%)
Query: 130 EDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNV 189
EDCY+ +GDD +A+KSGWD YGI+ RPSSNIIVRR++ +TP SG+ IGSE SGGI ++
Sbjct: 1 EDCYVSNGDDGIAIKSGWDEYGISFNRPSSNIIVRRITISTP-FSGIAIGSETSGGIRDI 59
Query: 190 TVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDPK 249
V+ + ++ ++ G+R+KT+ GRGG I NIT +I ++ V I+ S + DHPD ++P
Sbjct: 60 LVENISIYSSSVGIRVKTNVGRGGIIRNITFSHIYLDNVGTGIKFSGNTGDHPDARYNPM 119
Query: 250 ALPKIRGISFVNVV 263
ALP + I+ +NVV
Sbjct: 120 ALPVVGDIAVLNVV 133
>gi|423214932|ref|ZP_17201460.1| hypothetical protein HMPREF1074_02992 [Bacteroides xylanisolvens
CL03T12C04]
gi|392692195|gb|EIY85433.1| hypothetical protein HMPREF1074_02992 [Bacteroides xylanisolvens
CL03T12C04]
Length = 472
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 149/290 (51%), Gaps = 32/290 (11%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLW---------------------WNRTLKH-- 63
LI+ H+ N+ +TG GTI+G G + W + R
Sbjct: 148 LIYAYHVQNIALTG-KGTINGNGSKKFSAWADNQNIDKEILRRMGRENLPIYRRIFGEGF 206
Query: 64 -TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
R +E N+ I +T ++SPFW IHP++C NV+++ +T+ + + N DG DP+
Sbjct: 207 RLRPGFIEPYGCVNVRIEGITIKDSPFWVIHPIFCNNVIVRDVTVDS--HNRNNDGCDPE 264
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S +NV IE C +GDD +A+KSG D+ + +P+ N+++R + + +GV IGSE+
Sbjct: 265 SCSNVLIEGCTFSTGDDAIAIKSGRDNDAWRIGQPTENVVIRNCTFWSKI-NGVCIGSEI 323
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGG+ NV ++ + + ++ + K++ RGGYIENI +RNI+ + V+ + +
Sbjct: 324 SGGVRNVFIENISILKSSNAIYFKSNLDRGGYIENIYVRNIQADSVRTALVRVEPNYKGE 383
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPV-LAGIIGTQFEEICMKNVSL 291
G+ P K I+ NV T + + +AG I +KN+++
Sbjct: 384 RSGFHPTLFNK---ITVENVTCGQTNECAISMAGFPELPIRNITLKNITV 430
>gi|383155065|gb|AFG59697.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155069|gb|AFG59699.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155073|gb|AFG59701.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155075|gb|AFG59702.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155077|gb|AFG59703.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155079|gb|AFG59704.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155081|gb|AFG59705.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155093|gb|AFG59711.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155095|gb|AFG59712.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155097|gb|AFG59713.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
Length = 138
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/134 (50%), Positives = 96/134 (71%), Gaps = 1/134 (0%)
Query: 130 EDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNV 189
EDCY+ +GDD +A+KSGWD YGI+ RPSSNIIVRR++ +TP SG+ IGSE SGGI ++
Sbjct: 1 EDCYVSNGDDGIAIKSGWDEYGISFNRPSSNIIVRRITISTP-FSGIAIGSETSGGIRDI 59
Query: 190 TVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDPK 249
V+ + ++ + G+R+KT+ GRGG I NIT +I ++ V I+ S + DHPD ++P
Sbjct: 60 LVENISIYSSTVGIRVKTNVGRGGIIRNITFSHIYLDNVGTGIKFSGNTGDHPDARYNPM 119
Query: 250 ALPKIRGISFVNVV 263
ALP + I+ +NVV
Sbjct: 120 ALPVVGDIAVLNVV 133
>gi|160880868|ref|YP_001559836.1| glycoside hydrolase family protein [Clostridium phytofermentans
ISDg]
gi|160429534|gb|ABX43097.1| glycoside hydrolase family 28 [Clostridium phytofermentans ISDg]
Length = 518
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/281 (34%), Positives = 147/281 (52%), Gaps = 20/281 (7%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKHT---RGHLVELMNSNNILISNLT 83
+I G +++NV ITG GTIDG WWN R L+ L + NNI + +T
Sbjct: 183 IITGINVSNVEITG-EGTIDGCADETN--WWNNPKVRNIAWRPRLIFLNHCNNITVQGIT 239
Query: 84 FRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAV 143
+NSP W IHP + ++ +TIL P ++PNTDG+DP+S NV I Y GDD +A+
Sbjct: 240 VKNSPCWNIHPYFSDDLKFVDLTILNPKDSPNTDGLDPESCKNVLIVGVYFSLGDDCIAI 299
Query: 144 KSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGV 203
KSG + G RPS N+ +R+ S + IGSEM+GG+ N+TV + G+
Sbjct: 300 KSGKIYMGAKHKRPSENLEIRQCCMRDGHGS-ITIGSEMAGGVKNLTVRECLFIHTDRGL 358
Query: 204 RIKTDKGRG--GYIENITIRNIKMERVKIPIRISRGSNDHPD------EGWDPKAL---- 251
RIKT +GRG I+ + NI+M+ V P+ I+ PD + +P +
Sbjct: 359 RIKTRRGRGKDAIIDGVLFENIRMDHVMTPVVINCFYFCDPDGHSEYVQSKNPYEVDDRT 418
Query: 252 PKIRGISFVNVVSVNT-TKAPVLAGIIGTQFEEICMKNVSL 291
P I ++F N+ N A + G+ + E+I +NV++
Sbjct: 419 PHIGELTFRNLDCTNCHAAASYMYGLPEQKIEKITFENVNI 459
>gi|349858579|gb|AEQ20324.1| endopygalactorunase [uncultured bacterium CSLG10]
Length = 452
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/302 (29%), Positives = 151/302 (50%), Gaps = 38/302 (12%)
Query: 26 SLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKHT-------------RGHLVELM 72
+LI+ +NV I+G G IDG G+MWWD +W + R L+++
Sbjct: 112 ALINVYEQSNVKISG-QGVIDGDGKMWWDKYWQVRKDYEPKGLRWAADYDTPRPRLIQIY 170
Query: 73 NSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPL--NAPNTDGIDPDSSTNVCIE 130
S+N+ + LT R S FWT+H Y R V + G+TI + P+TDGID DSS++V ++
Sbjct: 171 KSDNVELQGLTLRRSGFWTVHICYSRKVTVDGVTIRNNIGGRGPSTDGIDVDSSSDVLVQ 230
Query: 131 DCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVT 190
+ IE DD + +K+G D G+ + RP+ N+++ V+ +G+ GSE SGGI +V
Sbjct: 231 NADIECNDDAIVMKAGRDADGLRVNRPTENVVIHDVT-VRDGAAGITFGSETSGGIRHVE 289
Query: 191 VDQLHVWDAAA-GVRIKTDKGRGGYIENITIRNIKMERVKIPI-------------RISR 236
++HV + G+ K+ RGG +E+I+I +I M V +I +
Sbjct: 290 AYRIHVLAPSPIGILFKSAATRGGTVEDISIHDIDMRNVPTAFSVNFNWNPNYSYAKIPQ 349
Query: 237 GSNDHPD-------EGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV 289
G + PD E + LP ++ I N+ + +T+A + + + +N+
Sbjct: 350 GLQNVPDYYKVMTQEVPRAQGLPHLKNIRISNIKASGSTQAFSVGAYADAPLQGVTFRNI 409
Query: 290 SL 291
+
Sbjct: 410 DI 411
>gi|159040816|ref|YP_001540068.1| glycoside hydrolase [Caldivirga maquilingensis IC-167]
gi|157919651|gb|ABW01078.1| glycoside hydrolase family 28 [Caldivirga maquilingensis IC-167]
Length = 462
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/325 (32%), Positives = 151/325 (46%), Gaps = 69/325 (21%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDL--------------------------WW--- 57
LI G + NV I G G DGQG WW + WW
Sbjct: 99 LIFGKDVRNVRIIG-EGVFDGQGYAWWPIRRFRVTEDYWRRLVESGGVVGDDGKTWWPTR 157
Query: 58 ------------------------NRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIH 93
R + R L++L N+ N+ I +TF++SP WTIH
Sbjct: 158 NAMEGAEAFRKITSEGGKPSTEDCERYREFFRPQLLQLYNAENVTIEGVTFKDSPMWTIH 217
Query: 94 PVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIA 153
+Y R+V + + +AP +PNTDG+ DSS++V + C I+ GDD + +KSG D G
Sbjct: 218 ILYSRHVTLINTSSIAPDYSPNTDGVVVDSSSDVEVRGCMIDVGDDCLVIKSGRDEEGRR 277
Query: 154 MARPSSNI-----IVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAA-GVRIKT 207
+ PS NI +++R G G IGSEMSGG+ NV++ Q V+D GVRIKT
Sbjct: 278 IGIPSENIHASGCLMKRGHG------GFVIGSEMSGGVRNVSI-QDSVFDGTERGVRIKT 330
Query: 208 DKGRGGYIENITIRNIKMER-VKIPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVN 266
+GRGG IEN+ + NI M + + + P E + PKIRG+ N
Sbjct: 331 TRGRGGLIENVYVNNIYMRNIIHEAVVVDMFYEKRPVEPVSERT-PKIRGVVIRNTSCDG 389
Query: 267 TTKAPVLAGIIGTQFEEICMKNVSL 291
+A ++ G+ E+I ++N +
Sbjct: 390 ADQAVLINGLPEMPIEDIIIENTRI 414
>gi|347530390|ref|YP_004837153.1| glycoside hydrolase family protein [Roseburia hominis A2-183]
gi|345500538|gb|AEN95221.1| glycoside hydrolase family protein [Roseburia hominis A2-183]
Length = 382
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 142/299 (47%), Gaps = 38/299 (12%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKHTRGHLV----------------- 69
LI+ NV I G G +DG G WW W + ++ HL+
Sbjct: 85 LIYAADCENVTICG-TGVLDGAGSAWWH--WKKLQQNAADHLIRAESQEIPVEERIFATR 141
Query: 70 ---------ELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGID 120
+ +N ++ + + T + P WTIHPVYC +VV++G+T+ PNTDG +
Sbjct: 142 KDALRPSFIQFINCKHVTLEDFTIEDGPQWTIHPVYCEDVVVRGVTV--NTKGPNTDGCN 199
Query: 121 PDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVR--RVSGTTPTCSGVGI 178
PDS V IEDC E+GDD +A+ SG + G + RP I V+ R G + V I
Sbjct: 200 PDSCRKVLIEDCTFETGDDCIAINSGMNEDGWRVGRPCEQIEVKNCRFIGGH---AAVAI 256
Query: 179 GSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERV-KIPIRISRG 237
GS MSGGI ++ + G+RIK+ +GRGGY++ + + ++M+ + K I +S
Sbjct: 257 GSGMSGGICDIWIHDCVARGTERGIRIKSMRGRGGYVKRVNVERMQMDEIEKEAIEVSMN 316
Query: 238 SNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAP 296
KA P+ + F ++ + L G+ + EI +++VS+ P
Sbjct: 317 YGSSTAVPVSQKA-PEFSELRFAHIRGNHAAIGVSLCGLPESPLREITLEDVSIAAEDP 374
>gi|325103049|ref|YP_004272703.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324971897|gb|ADY50881.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 526
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/300 (32%), Positives = 151/300 (50%), Gaps = 49/300 (16%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWW------------DLWWNRTLKH----------- 63
L + + N+ I G G IDG G+ WW D W + K
Sbjct: 117 LFYAKDVENIAIVG-RGLIDGHGKNWWRFSEVEVKKLTEDSKWQKEFKRLNPNVLAPDLP 175
Query: 64 ---TRGHL----VELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNT 116
RG L ++ MN N+ I ++ +NSPFWTI+P YC NV + G+TI P +PNT
Sbjct: 176 GWIERGFLRPPFIQFMNCKNVQIKDIKIQNSPFWTINPQYCDNVTVDGITIDNPP-SPNT 234
Query: 117 DGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGV 176
DGI+P+S NV I +C+I GDD + +KSG D G + P+ N + + GV
Sbjct: 235 DGINPESCRNVRIANCHISVGDDCITIKSGKDRSGRKVNIPAENYTITNCT-MLRGHGGV 293
Query: 177 GIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIE-----NITIRNIKMERVKIP 231
IGSEMSGG+ N+ + G+RIK+ +GRGG +E NI +RNI+ + + +
Sbjct: 294 VIGSEMSGGVKNIAITNCIFDGTDRGIRIKSARGRGGVVEDIRVSNIIMRNIRDQAIVLD 353
Query: 232 IRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 291
++ ++ +N P + P R I ++ ++ +T +A L G+ EE+ + N+S
Sbjct: 354 LQYAK-TNPEPIS----ERTPIFRNIH-ISDITASTNRAGYLNGL-----EELPISNISF 402
>gi|326799707|ref|YP_004317526.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326550471|gb|ADZ78856.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 517
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/302 (32%), Positives = 148/302 (49%), Gaps = 38/302 (12%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWW-----------DLWW-------NRTLKH----- 63
I+ N+ ITG GT++G G+ WW + W N+ + H
Sbjct: 113 FIYAYEAENIRITG-RGTLNGNGKKWWAYSEVHVKNSPESKWQKEFHKLNKNVLHPDLPG 171
Query: 64 --TRGHL----VELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTD 117
RG L ++ M N+ I +T +NSPFWT++P +C NV I G+TI P +PNTD
Sbjct: 172 WVERGFLRPPFIQPMYCKNVRIDGITIKNSPFWTVNPEFCDNVTIDGVTINNP-PSPNTD 230
Query: 118 GIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVG 177
GI+P+S +NV I +C+I GDD + +KSG D G ARP+ N + + + GV
Sbjct: 231 GINPESCSNVHISNCHISVGDDCITIKSGKDRSGRKEARPAENYTITNCTMLSGH-GGVV 289
Query: 178 IGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRG 237
IGSEMSG + + + G+RIKT +GRGG +E+I + NI M+ +K +
Sbjct: 290 IGSEMSGDVKKIVISNCIFDGTDRGIRIKTARGRGGVVEDIQVSNIVMKNIKQQAIVLDM 349
Query: 238 SNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPS 297
D + P+ I N ++ +A L G+ EE+ ++NVS +
Sbjct: 350 QYAKTDREPVSERTPRFSNIHLSN-ITAQGEQAGYLNGL-----EEMPIENVSFSNMVME 403
Query: 298 AK 299
K
Sbjct: 404 TK 405
>gi|254295110|ref|YP_003061133.1| glycoside hydrolase family protein [Hirschia baltica ATCC 49814]
gi|254043641|gb|ACT60436.1| glycoside hydrolase family 28 [Hirschia baltica ATCC 49814]
Length = 469
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 150/310 (48%), Gaps = 51/310 (16%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQG--QMWW------DLWWNRTLKHT-------------- 64
LI+ NV ITG G +DGQ + WW W + H
Sbjct: 144 LIYARDAKNVAITG-EGVLDGQASNEHWWPWCGAERFGWREGVGHQTPDRQALFEMAESG 202
Query: 65 --------------RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAP 110
R VE N N+L+ ++ ++SPFW IHPV RNV+++G+ ++
Sbjct: 203 IPVEQRRFGPGHYLRPSFVEFYNCENVLVEDIHLKDSPFWNIHPVLSRNVIVRGVEVVG- 261
Query: 111 LNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTT 170
+ PN DG +P+S ++ IE+CY ++GDD +A+KSG + G +A PS NI++R
Sbjct: 262 -HGPNNDGCNPESVDHMLIENCYFDTGDDCIAIKSGRNADGRRVAVPSENILIRNCQ-MK 319
Query: 171 PTCSGVGIGSEMSGGIFNV-----TVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKM 225
GV IGSE+SG +FNV +D +W +RIK + RGG +ENI +RNI++
Sbjct: 320 AGHGGVVIGSEISGDVFNVYAEGCAMDSPDLWYM---LRIKNNAMRGGVVENIHLRNIEV 376
Query: 226 ERVKIPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEIC 285
+V + I + + +EG + P +R +S ++ + G + E I
Sbjct: 377 GQVARAVMI---CDFNYEEGINGPFTPVLRNVSMQSIAVKKAVRVLDSQGFAKAEIENIS 433
Query: 286 MKNVSLLGLA 295
+K+ G++
Sbjct: 434 LKDCIFNGVS 443
>gi|393781486|ref|ZP_10369681.1| hypothetical protein HMPREF1071_00549 [Bacteroides salyersiae
CL02T12C01]
gi|392676549|gb|EIY69981.1| hypothetical protein HMPREF1071_00549 [Bacteroides salyersiae
CL02T12C01]
Length = 501
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/313 (31%), Positives = 146/313 (46%), Gaps = 56/313 (17%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWW--DLWWNRTLKHTRGHL---------------- 68
LI+ D+ N+ ITG GT+DG G WW ++ R +K G L
Sbjct: 115 LIYADNADNLTITG-RGTLDGNGFKWWAWEVDTRRLIKENGGKLPSLNKLQQMWVDANKD 173
Query: 69 --------------------VELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTIL 108
++ NNI+I N+ NSPFWTI+P +C N+ + G+TI
Sbjct: 174 LEISDYYKPSLERRMFRPPFIQFFECNNIVIENVKIINSPFWTINPAFCDNITVHGVTIN 233
Query: 109 APLN---APNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRR 165
P PNTDGI+P S +NV I DC+I GDD + +KSG D G +P N+ +
Sbjct: 234 NPSKNPKGPNTDGINPTSCSNVRISDCFISVGDDCITIKSGRDADGRKYGKPCQNLTITN 293
Query: 166 ---VSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRN 222
+SG GV IGSEMSGG+ V + AG+R+K +GRGG +E+I + N
Sbjct: 294 CIMLSGH----GGVVIGSEMSGGVKRVAISNCVFDGTDAGIRLKASRGRGGVVEDIRVDN 349
Query: 223 IKMERVKIPIRISRGSNDHPDEGWDPKAL----PKIRGISFVNVVSVNTTKAPVLAGIIG 278
I M+ + R + + D+ P+ + P R I N+ + + + GI
Sbjct: 350 IVMKNIG---RNAFIFDLFYDKLSKPEPVSERTPVFRNIHLSNITGSDVKQIGYIKGIEE 406
Query: 279 TQFEEICMKNVSL 291
E+ N+++
Sbjct: 407 MPINELSFSNINM 419
>gi|218129085|ref|ZP_03457889.1| hypothetical protein BACEGG_00659 [Bacteroides eggerthii DSM 20697]
gi|217988720|gb|EEC55039.1| polygalacturonase (pectinase) [Bacteroides eggerthii DSM 20697]
Length = 445
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/324 (31%), Positives = 155/324 (47%), Gaps = 59/324 (18%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLW------------------------------ 56
LI+ N+ I G G +DGQG+ WW +
Sbjct: 113 LIYATDAENITIKG-EGKLDGQGKAWWKEFFRVLIDLRDNGKRDINKYQPLFEQANDMKT 171
Query: 57 --------WNRTL--KHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMT 106
W+ TL + R ++ + N+ I +T NSPFWT++P +C NV +KG+T
Sbjct: 172 LYAETNVDWHSTLDRRFLRPPFIQPLRCRNVRIEGITIVNSPFWTVNPNFCDNVTVKGVT 231
Query: 107 ILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRV 166
I + +PNTDGI+P+S +NV I DC+I GDD + +KSG D + RP NI +
Sbjct: 232 I-NNVPSPNTDGINPESCSNVHISDCHISVGDDCITIKSGRDLQARKIGRPCENITITNC 290
Query: 167 SGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRN---- 222
+ + GV IGSEMSGG+ VT+ G+RIK+ +GRGG +E+I + N
Sbjct: 291 TMLSGH-GGVVIGSEMSGGVKKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMS 349
Query: 223 -IKMERVKIPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPV-LAGIIGTQ 280
IK E V + ++ S+ + E P R I FV ++V T+ P+ + G+
Sbjct: 350 DIKREAVVLNLKYSQMKMEKKSE-----RTPVFRNI-FVTGLTVRGTQTPLKVDGLPEAP 403
Query: 281 FEEICMKNVSLLGLAPSAKWQCQF 304
E I +++ + AK +C F
Sbjct: 404 IEGIVFRDIYV----NDAKEECLF 423
>gi|313236094|emb|CBY11419.1| unnamed protein product [Oikopleura dioica]
Length = 204
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 112/189 (59%), Gaps = 9/189 (4%)
Query: 2 DEWPIIDPLPSYGRGRERLGGR----HISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWW 57
D++ I+ LPSY R+ L + S+ +G+++ NV+ TG G I+G+G+ WW
Sbjct: 16 DDYQIMPTLPSYCIARDGLAASKDALYRSVFYGEYVENVVFTG-EGLINGEGENWWTRN- 73
Query: 58 NRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTD 117
++ LK R L + + N I LT++NSPFWTIH VY N+ I + ILA + NTD
Sbjct: 74 SQNLKFERPRLFQCLFCKNFKIEKLTWKNSPFWTIHFVYSENIEIADVAILAEHESRNTD 133
Query: 118 GIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVG 177
GID DSS+NV I D +I+ GDD++A+KSG+D G P+ N++V +
Sbjct: 134 GIDIDSSSNVHIHDVFIDVGDDVIALKSGFDFCGREFGMPTKNVLVE---NSVFINENFA 190
Query: 178 IGSEMSGGI 186
IGSEMSGG+
Sbjct: 191 IGSEMSGGV 199
>gi|381180485|ref|ZP_09889325.1| glycoside hydrolase family 28 [Treponema saccharophilum DSM 2985]
gi|380767666|gb|EIC01665.1| glycoside hydrolase family 28 [Treponema saccharophilum DSM 2985]
Length = 453
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/242 (33%), Positives = 127/242 (52%), Gaps = 35/242 (14%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDL--------------------------WWN-- 58
L+ H NV ITG GT++G G+ WW+L + N
Sbjct: 93 LVLSSHTKNVRITG-KGTLNGNGETWWNLKKAKKERGQSAPEDMYEKILAELNPGYENQP 151
Query: 59 -----RTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNA 113
R ++ R L+E+ + N+ + + ++SPFWT+HP+Y +N+ ++G+ I P A
Sbjct: 152 GGGGGREIQFLRPSLLEISFAENVSVEGIEIKDSPFWTVHPLYVKNLTLRGIKIDNPYTA 211
Query: 114 PNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTC 173
PNTDGID DS NV IEDC++ GDD + +KSG GI A+P+ N+ +R +
Sbjct: 212 PNTDGIDVDSCENVVIEDCFVSVGDDGICIKSGSGPDGIRCAKPTVNVEIRNCT-VRNAH 270
Query: 174 SGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIR 233
G+ IGSE + G+ ++ + G+RIK+ +GRGG I +I +R++ M PI
Sbjct: 271 GGIVIGSETAAGMSHIHAVGCDLSGTDRGIRIKSRRGRGGDIFDIELRDMVMNNTLCPIA 330
Query: 234 IS 235
++
Sbjct: 331 MN 332
>gi|391227888|ref|ZP_10264095.1| endopolygalacturonase [Opitutaceae bacterium TAV1]
gi|391223381|gb|EIQ01801.1| endopolygalacturonase [Opitutaceae bacterium TAV1]
Length = 916
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/303 (30%), Positives = 148/303 (48%), Gaps = 46/303 (15%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKHTRGHLVELMNSNN---------- 76
++ ++ ITG G ++GQGQ WW W KH++ + + +N
Sbjct: 110 FLYAHRCEDISITGA-GLLNGQGQSWWP--W----KHSQPGMSSIQGPDNFAALRTPLEE 162
Query: 77 ----------------------ILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAP--LN 112
+LI +TFR+SP WT+ PV+C +++I+ TIL P L
Sbjct: 163 RVFGTREAGVRPVFCQPIECKRVLIEGVTFRDSPSWTLQPVWCSDLIIRHSTILNPPSLF 222
Query: 113 APNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPT 172
+ NTDGIDPD+ NV IE C +++GDD + +K+G D PS NI++R +
Sbjct: 223 SHNTDGIDPDACRNVLIEHCVVDTGDDAICIKAGRDEDAWEAGIPSENILIRHCEIRS-G 281
Query: 173 CSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVK-IP 231
G+ IGSEMS G+ N+ +RIKT GRGG+I++I I NI R++
Sbjct: 282 HGGITIGSEMSAGVRNLHAHDCTCDGTDTAIRIKTKPGRGGFIKDILIENITARRIRHAA 341
Query: 232 IRISRGSNDHPDEGWDPKAL---PKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKN 288
+ ++ D ++ DPK L P + I NV + +A L G+ G + + ++N
Sbjct: 342 VELTFHYGDTLEKPPDPKNLKHVPAVENILIRNVRCDSAREALHLRGLPGHPLKNVTLQN 401
Query: 289 VSL 291
+ +
Sbjct: 402 LEI 404
>gi|395803704|ref|ZP_10482948.1| glycoside hydrolase [Flavobacterium sp. F52]
gi|395434258|gb|EJG00208.1| glycoside hydrolase [Flavobacterium sp. F52]
Length = 451
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 156/292 (53%), Gaps = 42/292 (14%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLW---------WNRTLKHT------------- 64
LI+ ++ TN+ I+G GTIDG+G W + +R + H
Sbjct: 135 LIYANNCTNIAISG-EGTIDGEGGKTWKTFKAKENEGKNRSRDMNHNNTPLSERKFGEGY 193
Query: 65 --RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
R +++ +N NIL+ N+ NSPFW +H + ++ I+G++ LN N DGIDP+
Sbjct: 194 FLRPQMIQFLNCKNILVENIRIENSPFWCLHLLKSESITIRGIS-YKSLNH-NNDGIDPE 251
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIA-MARPSSNIIVRRVSGTTPTCSGVGIGSE 181
+ +V IE+ ++GDD VA+K+G DH G A A PS NII+R + GV IGSE
Sbjct: 252 YAKDVLIENVTFDNGDDNVAIKAGRDHEGRANTATPSQNIIIRNCN--FKGLHGVVIGSE 309
Query: 182 MSGGIFNVTVDQLHVWD-AAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSND 240
MS G+ NV V+ G+ +KT+ RGGYI+NI +RNI++++V+ + I+ +N
Sbjct: 310 MSAGVQNVFVENCKTAGYLKRGIYLKTNADRGGYIKNIFVRNIQLDQVEDCLYIT--ANY 367
Query: 241 HPD-EGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 291
H + +G+ + + F N+ T +GI+ F + +KN+SL
Sbjct: 368 HGEGKGYQ----SDVSNVYFSNI----TCNKASESGIVIQGFADKKIKNISL 411
>gi|23099543|ref|NP_693009.1| hypothetical protein OB2088 [Oceanobacillus iheyensis HTE831]
gi|22777773|dbj|BAC14044.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
Length = 495
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 162/332 (48%), Gaps = 47/332 (14%)
Query: 1 MDEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDL----- 55
+D++ P+ + G E G L++G+ LTNV I G +G IDGQG+ WW++
Sbjct: 68 IDDFSAYPPVKTRWSGYECYG--FSPLLYGNGLTNVSIIG-SGCIDGQGEAWWEVNHLLR 124
Query: 56 --------------WWNRTL-------------KHTRGHLVELMNSNNILISNLTFRNSP 88
N+++ + R L+++ + +++ + +T NSP
Sbjct: 125 KGEEYDHPQTKEIAELNKSITEPKNTNLVEWPSQFLRPPLLQMYDCDSVTLDGITLENSP 184
Query: 89 FWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWD 148
FW H VYC NV I + P + PN DG+D DS +NV + +C+ + GDD +A KSG +
Sbjct: 185 FWNTHFVYCDNVTIHNVKFKNPWDTPNGDGLDLDSCSNVRVSNCHFDVGDDCLAFKSGIN 244
Query: 149 HYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTD 208
G +ARP+ N+ V + G+ +GSE SGGI N+ V G+R+KT+
Sbjct: 245 EDGRRVARPTENVAVTNCTMKNGH-GGIVMGSENSGGIRNIAVSNCVFIGTDRGIRLKTN 303
Query: 209 KGRGGYIENITIRNIKMERVKIPIRIS---RGSNDHPDEGWDP-------KALPKIRGIS 258
+ RG YI +I I NI M+ V P+ I+ R D D + + P+I I
Sbjct: 304 RARGSYIRDILIDNIYMDGVLCPLAINSFYRHGLDKSDSLINELSPIEISEKTPEIEYIH 363
Query: 259 FVNVVSVNT-TKAPVLAGIIGTQFEEICMKNV 289
NV + N + A + G+ ++I +++V
Sbjct: 364 ISNVTARNCRSAAGFIYGLPEKYVKDIILRHV 395
>gi|374316328|ref|YP_005062756.1| endopolygalacturonase [Sphaerochaeta pleomorpha str. Grapes]
gi|359351972|gb|AEV29746.1| endopolygalacturonase [Sphaerochaeta pleomorpha str. Grapes]
Length = 454
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/232 (37%), Positives = 120/232 (51%), Gaps = 34/232 (14%)
Query: 36 VIITGYNGTIDGQGQMWWDL-WWNRTLK-------------------------------H 63
V I G GT+ G G WWDL R LK
Sbjct: 101 VTIQG-EGTLYGSGHYWWDLSLGKRNLKMEPATETEKRFALLNPGYKSQGGGGGGRQSQF 159
Query: 64 TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDS 123
R LV++ +S++IL+ +T +SPFWT+HP+Y RN+V K ++I P NAPNTDGID DS
Sbjct: 160 LRPPLVQVKDSSDILLEGITLEDSPFWTLHPLYSRNLVFKNLSIKNPKNAPNTDGIDLDS 219
Query: 124 STNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMS 183
NV IE C I+ GDD +A+KSG GI RP+ ++ + + + G IGSE +
Sbjct: 220 CENVTIEGCVIDVGDDGIALKSGSGPDGILTGRPTKDVRIFQCT-VRNAHGGAVIGSETA 278
Query: 184 GGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRIS 235
GI NV V G+RIKT +GRGG I +++ +KM + P+ I+
Sbjct: 279 AGIHNVEVSNCLFDGTDRGIRIKTRRGRGGKISHLSFLGLKMVKNLCPLTIN 330
>gi|355673331|ref|ZP_09058928.1| hypothetical protein HMPREF9469_01965 [Clostridium citroniae
WAL-17108]
gi|354814797|gb|EHE99396.1| hypothetical protein HMPREF9469_01965 [Clostridium citroniae
WAL-17108]
Length = 532
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 99/320 (30%), Positives = 154/320 (48%), Gaps = 29/320 (9%)
Query: 8 DPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWN---RTLKHT 64
DPLP + +++ G ++ N +I G G I+G + WW+ R
Sbjct: 186 DPLPMFS-----------AVVTGINIENAVIYG-RGVIEGNAGFGEENWWHDPKRMKTAF 233
Query: 65 RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSS 124
R +V L +++I LT RNSP W IHP + ++ + +L+P ++PNTDG+DP+S
Sbjct: 234 RPRMVFLERCKHVVIQGLTLRNSPSWNIHPYFSEHLKFLDLRVLSPKDSPNTDGLDPESC 293
Query: 125 TNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSG 184
+V I GDD +AVKSG + G RPS +I+V R S V IGSEM+G
Sbjct: 294 RDVEITGICFSVGDDCIAVKSGKIYMGTTYKRPSEDIVVSRCCMRDGHGS-VTIGSEMAG 352
Query: 185 GIFNVTVDQLHVWDAAAGVRIKTDKGRG--GYIENITIRNIKMERVKIPIRISRGSNDHP 242
G+ N+TV G+RIKT +GRG ++ I I M++VK P I+ P
Sbjct: 353 GVKNLTVRDCVFRHTDRGLRIKTRRGRGKNAVVDGILFERIHMDQVKTPFVINSFYYCDP 412
Query: 243 DEGWD----------PKALPKIRGISFVNVVSVNT-TKAPVLAGIIGTQFEEICMKNVSL 291
D + P I+ ++F ++ +VN A L G+ + ++ M+ VS+
Sbjct: 413 DGNSEYVRTKERLPVDDRTPWIKHLTFRDIEAVNCHVAAAYLYGLPERKIGKVEMERVSI 472
Query: 292 LGLAPSAKWQCQFVSGFTSQ 311
+ K Q + G + Q
Sbjct: 473 SFTPEAQKGQPAMMEGCSEQ 492
>gi|307718144|ref|YP_003873676.1| hypothetical protein STHERM_c04310 [Spirochaeta thermophila DSM
6192]
gi|306531869|gb|ADN01403.1| hypothetical protein STHERM_c04310 [Spirochaeta thermophila DSM
6192]
Length = 462
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 120/231 (51%), Gaps = 35/231 (15%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWWN---------------------------------RTL 61
+V I+G G IDGQG WW ++ + R
Sbjct: 100 DVRISG-GGVIDGQGASWWRMYRDYREGRLTRFPFSSVEEIARRNAHLSTKASGGGGRES 158
Query: 62 KHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDP 121
R L+++ +S ++I + RNS FW H +Y V I+G++ P +APNTDG++
Sbjct: 159 HFLRPPLLQVKDSRRVVIEGIVLRNSAFWNTHILYSDEVWIRGVSFENPPDAPNTDGLNV 218
Query: 122 DSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSE 181
DSS NV IEDC + GDD + +KSG D G + RP+ ++++R G+ GSE
Sbjct: 219 DSSRNVRIEDCTFDVGDDCLGLKSGIDEDGRRVGRPTEHVVIRGCI-MRRGHGGIVCGSE 277
Query: 182 MSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPI 232
++GG+ NV V D G+RIK+ +GRGG++EN+ I I MERV +P+
Sbjct: 278 IAGGVRNVVVTGCIFQDTDRGIRIKSRRGRGGFVENVMIHQIVMERVLVPL 328
>gi|383155083|gb|AFG59706.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155087|gb|AFG59708.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155089|gb|AFG59709.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155091|gb|AFG59710.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
Length = 138
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 66/134 (49%), Positives = 96/134 (71%), Gaps = 1/134 (0%)
Query: 130 EDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNV 189
EDCY+ +GDD +A+KSGWD YGI+ RPSSNIIVRR++ +TP SG+ IGSE SGGI ++
Sbjct: 1 EDCYVSNGDDGIAIKSGWDEYGISFNRPSSNIIVRRITISTP-FSGIAIGSETSGGIRDI 59
Query: 190 TVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDPK 249
V+ + ++ + G+R+KT+ GRGG I NIT +I ++ V I+ S + DHPD ++P
Sbjct: 60 LVENISIYSSTVGIRVKTNVGRGGIIRNITFSHIYLDNVGTGIKFSGNTGDHPDARYNPM 119
Query: 250 ALPKIRGISFVNVV 263
ALP + I+ ++VV
Sbjct: 120 ALPVVGDIAVLDVV 133
>gi|340751772|ref|ZP_08688582.1| glycoside hydrolase [Fusobacterium mortiferum ATCC 9817]
gi|229420732|gb|EEO35779.1| glycoside hydrolase [Fusobacterium mortiferum ATCC 9817]
Length = 512
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 98/283 (34%), Positives = 145/283 (51%), Gaps = 22/283 (7%)
Query: 26 SLIHGDHLTNVIITGYNGTIDGQG--QMWWDLWWNRTLKHT--RGHLVELMNSNNILISN 81
SLI G ++ NV I G G ++GQ + WW N +K+ R + L + N++I
Sbjct: 180 SLITGINVKNVRIIG-RGCLNGQASKENWWK---NPKVKNIAWRPRSIFLNSCENVVIEG 235
Query: 82 LTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLV 141
+ NSP WTIHP N+ + I P ++PNTDGIDP+S NV GDD +
Sbjct: 236 IKIMNSPSWTIHPFLTNNLRFINLKIENPADSPNTDGIDPESCENVEYIGIDFSVGDDCI 295
Query: 142 AVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAA 201
A+KSG + G + +PS N I++ S GV IGSEMSGG+ N+ +++ +
Sbjct: 296 AIKSGKLYLGKVLNKPSKNFIIKNCS-MKYGHGGVVIGSEMSGGVENINIEKCDFYKTDK 354
Query: 202 GVRIKTDKGRG--GYIENITIRNIKMERVKIPIRISRGSNDHPDEGWD----------PK 249
G+RIKT +GRG G I+ I ++NI M+ VK+P + PD + +
Sbjct: 355 GIRIKTRRGRGENGVIDGIYVKNISMKEVKVPFVFNSFYFCDPDGKTEYVYTKEKLPVDE 414
Query: 250 ALPKIRGISFVNVVSVNTTK-APVLAGIIGTQFEEICMKNVSL 291
P I+ ISF N+ + +T A L G+ E + KNV +
Sbjct: 415 RTPSIKNISFENIKAEDTLVCAGFLYGLPEKPIENVKFKNVEV 457
>gi|182416092|ref|YP_001821158.1| glycoside hydrolase [Opitutus terrae PB90-1]
gi|177843306|gb|ACB77558.1| glycoside hydrolase family 28 [Opitutus terrae PB90-1]
Length = 543
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 94/302 (31%), Positives = 145/302 (48%), Gaps = 37/302 (12%)
Query: 19 RLGGRHI----SLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKHT---------- 64
R+GG + I+ TNV ITG G ++G Q WW W + K
Sbjct: 132 RVGGIELYNYSPFIYARDCTNVAITG-PGRLNGNSQRWW-AWKTKETKRIFRLAPDGVPV 189
Query: 65 ------------RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLN 112
R + V N N+L+ T P WTIHPVY N++I+ + +L
Sbjct: 190 EQRIFGTPEAAIRPNFVVFFNCRNVLMEGFTIGGGPNWTIHPVYSENIIIRRVHVLT--E 247
Query: 113 APNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPT 172
PN DGIDPDS NV IE C ++GDD V +KSG++ G +ARP+ N+++R S
Sbjct: 248 GPNNDGIDPDSCRNVLIEHCVFDTGDDCVVLKSGYNEDGWRVARPTENVVMRWCSSAR-G 306
Query: 173 CSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIK---MERVK 229
G+ +GSEMSG + NV + VRIK+ +GRGG +ENI N++ M++
Sbjct: 307 HGGLVVGSEMSGDVRNVYMHDCDFAGTDRAVRIKSRRGRGGVVENIWAENLRVRDMQQEV 366
Query: 230 IPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV 289
+ + + G++ + P P R I V + A +AG+ + E + +++
Sbjct: 367 VILNMDYGADRNQAFTEKP---PLFRNIHVRRVTADGAPAAIRIAGLADSPIEHVTFEDL 423
Query: 290 SL 291
++
Sbjct: 424 TI 425
>gi|407791858|ref|ZP_11138936.1| polygalacturonase [Gallaecimonas xiamenensis 3-C-1]
gi|407198911|gb|EKE68937.1| polygalacturonase [Gallaecimonas xiamenensis 3-C-1]
Length = 495
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 132/244 (54%), Gaps = 14/244 (5%)
Query: 59 RTLKHTRGHL-----VELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNA 113
RT H +G ++ N+LI +T NSPFW +HPV C++V ++G+T + +
Sbjct: 228 RTRLHGQGSFLRPAFIQPYLCQNVLIEGVTLVNSPFWLLHPVLCQSVTVRGVTCRS--HG 285
Query: 114 PNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTC 173
PN DG DP+ +V IE C ++GDD +A+KSG + G + + N++VR
Sbjct: 286 PNNDGCDPECCDHVVIEGCTFDTGDDCIAIKSGRNEDGRRVGQACRNLVVRNCQ-MKDGH 344
Query: 174 SGVGIGSEMSGGIFNVTVD--QLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIP 231
G+ +GSE+SGG++NV +D Q+ + RIKT+ RGG IE I IRN+++ VK
Sbjct: 345 GGLVLGSEISGGVYNVFLDNCQMDSPELERAFRIKTNARRGGTIEGIRIRNLRVGEVKDA 404
Query: 232 IRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 291
+ I N +EG + + LP++R I N+V + +A L G E + + N +
Sbjct: 405 VSI----NFFYEEGQEGRFLPEVRDIHIDNLVVRSAQRAFYLRGFASAPIEGVTLSNCRI 460
Query: 292 LGLA 295
+A
Sbjct: 461 DKVA 464
>gi|442804291|ref|YP_007372440.1| endopygalactorunase [Clostridium stercorarium subsp. stercorarium
DSM 8532]
gi|442740141|gb|AGC67830.1| endopygalactorunase [Clostridium stercorarium subsp. stercorarium
DSM 8532]
Length = 455
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 85/218 (38%), Positives = 115/218 (52%), Gaps = 23/218 (10%)
Query: 34 TNVIITGYNGTIDGQGQMWWDLWWNRT-------------------LKHTRGHLVELMNS 74
NV ITG GTIDGQG WW+ +W R + + NS
Sbjct: 101 ANVTITG-KGTIDGQGFYWWNKYWGEDRLGGMRKEYTGKGLRWAVDYDCKRPRNILIYNS 159
Query: 75 NNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYI 134
+ + + +LT R SPFW +H Y +V + G+ ++ P+TDGID DSS NV IE+C I
Sbjct: 160 SQVTLRDLTLRRSPFWNVHICYSTDVYVSGL-VIKDNEGPSTDGIDVDSSRNVLIENCNI 218
Query: 135 ESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQL 194
E DD + +K+G D G+ + RPS NI+VR S + +GV IGSE SG I NV + Q+
Sbjct: 219 ECNDDNICIKAGRDADGLRVNRPSENIVVRNCS--IGSGAGVTIGSETSGSIRNVEIYQI 276
Query: 195 HVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPI 232
G RIK+ RGG IENI + + +M V P
Sbjct: 277 KANGTDGGFRIKSALTRGGVIENIRVHDFEMVNVLRPF 314
>gi|386346149|ref|YP_006044398.1| glycoside hydrolase family protein [Spirochaeta thermophila DSM
6578]
gi|339411116|gb|AEJ60681.1| glycoside hydrolase family 28 [Spirochaeta thermophila DSM 6578]
Length = 462
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 124/242 (51%), Gaps = 35/242 (14%)
Query: 24 HISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWN------------------------- 58
+ +I + ++ I+G G IDGQG WW ++ +
Sbjct: 89 YAPMIFVEGAEDIRISG-GGVIDGQGDAWWRMYRDYREGRVTRFPFSSVEEIARRNAHLS 147
Query: 59 --------RTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAP 110
R R L+++ +S ++I + RNS FW H +Y V I+G++ P
Sbjct: 148 TKASGGGGRESHFLRPPLLQVKDSRRVVIEGIILRNSAFWNTHILYSDEVWIRGVSFENP 207
Query: 111 LNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTT 170
+APNTDG++ DSS NV IEDC + GDD + +KSG D G + RP+ ++++R
Sbjct: 208 PDAPNTDGLNVDSSRNVRIEDCTFDVGDDCLGLKSGIDEDGRRVGRPTEHVVIRGCI-MR 266
Query: 171 PTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKI 230
G+ GSE++GG+ NV V D G+RIK+ +GRGG++EN+ + I MERV +
Sbjct: 267 RGHGGIVCGSEIAGGVRNVVVTGCIFQDTDRGIRIKSRRGRGGFVENVMVHQIVMERVLV 326
Query: 231 PI 232
P+
Sbjct: 327 PL 328
>gi|269119326|ref|YP_003307503.1| glycoside hydrolase family protein [Sebaldella termitidis ATCC
33386]
gi|268613204|gb|ACZ07572.1| glycoside hydrolase family 28 [Sebaldella termitidis ATCC 33386]
Length = 509
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 101/280 (36%), Positives = 143/280 (51%), Gaps = 18/280 (6%)
Query: 26 SLIHGDHLTNVIITGYNGTIDGQGQMWWDLWW-NRTLKHT--RGHLVELMNSNNILISNL 82
SL G + NV ITG GTIDG + WW + +K R + L + +NI I +
Sbjct: 180 SLFTGVSVNNVNITG-EGTIDGNSDR--ETWWKDAKIKRISWRPRTIFLTDCSNINIVGI 236
Query: 83 TFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVA 142
NSP WT+HPV+ N+ M I P ++PNTDGIDP+S NV I GDD +A
Sbjct: 237 NIENSPSWTLHPVFSSNLGFFDMKIRNPKDSPNTDGIDPESCKNVSIIGVKFSVGDDCIA 296
Query: 143 VKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAG 202
+KSG G + PS NI + GV IGSEMSGGI NV + + G
Sbjct: 297 IKSGKGKIGREIGIPSENINIENCHMEFGH-GGVVIGSEMSGGIKNVNIKNCLFENTDRG 355
Query: 203 VRIKTDKGRGGYIENITIRNIKMERVKIPIRISR----GSNDHPDEGWDPKAL------P 252
+RIKT +GRGG I+ I NI M++V P I+ S+ + W+ L P
Sbjct: 356 LRIKTRRGRGGIIDGIHAENIVMDKVLTPFVINEFYYCDSDGKTEYVWNKDKLEITEETP 415
Query: 253 KIRGISFVNVVSVNTTK-APVLAGIIGTQFEEICMKNVSL 291
I+ I+F N+V N+ A + G+ + E + ++N+++
Sbjct: 416 VIKNITFKNMVCKNSEVCAGFMYGLPERKIERVVLENLTI 455
>gi|196228361|ref|ZP_03127228.1| Exo-poly-alpha-galacturonosidase [Chthoniobacter flavus Ellin428]
gi|196227764|gb|EDY22267.1| Exo-poly-alpha-galacturonosidase [Chthoniobacter flavus Ellin428]
Length = 469
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 101/336 (30%), Positives = 156/336 (46%), Gaps = 54/336 (16%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWW--------- 53
++ + DPLP+ + + LI G L ++ I G G IDG G WW
Sbjct: 114 DFGLPDPLPATQQEIDGYKKLLRPLISGTKLDDIAIAG-EGIIDGAGSGWWAKSDKAAER 172
Query: 54 -------------------------DLWWNRTLKHTRGHLVELMNSNNILISNLTFRNSP 88
+ L R L+ L + + + +T RNSP
Sbjct: 173 AAAAAKAGESASTKPADSTSPKSEKPAPPEKPLYVPRPFLITLRDCARVHLQGVTLRNSP 232
Query: 89 FWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWD 148
+ P +C +VV++ +TI +P +APNTDGIDP +S +V I C I++GDD +AVK G
Sbjct: 233 MFHFVPHHCHDVVVEDVTIFSPADAPNTDGIDPANSRDVLIRRCTIDTGDDNIAVKGG-- 290
Query: 149 HYGIAMARPSSNIIV---RRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRI 205
G+A P+ N+ V + + G GV IGSE G+ N V + + +RI
Sbjct: 291 --GVAN-EPTENVTVTDCKFLHG-----HGVSIGSETEAGVRNFLVQRCAFENTGTALRI 342
Query: 206 KTDKGRGGYIENITIRNIKMERVKIPIRI-----SRGSNDHPDEGWDPKALPKIRGISFV 260
K+D+ RGG +EN+ R+I M+ V+ I I + + HP+ K P +R I+F
Sbjct: 343 KSDRTRGGVVENVLYRDITMKNVETAITIFLFYDDKKAAAHPELAPVTKQTPMVRNITFQ 402
Query: 261 NVVSVNTT-KAPVLAGIIGTQFEEICMKNVSLLGLA 295
+V TT KA L G+ + ++ +V + G A
Sbjct: 403 KIVCHGTTRKAGELVGLPESPISDVVFDDVHIDGAA 438
>gi|192362237|ref|YP_001980696.1| polygalacturonase pga28A [Cellvibrio japonicus Ueda107]
gi|190688402|gb|ACE86080.1| polygalacturonase, putative, pga28A [Cellvibrio japonicus Ueda107]
Length = 489
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/229 (35%), Positives = 124/229 (54%), Gaps = 9/229 (3%)
Query: 65 RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSS 124
R V+ +LI +T NSPFW ++PV C +V+++G+T + PN+DG DP+S
Sbjct: 239 RPPFVQPYECERVLIEGVTIVNSPFWLLNPVLCNDVIVRGVTCDS--MGPNSDGCDPESC 296
Query: 125 TNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSG 184
V IEDCY ++GDD +A+KSG +H G + RPS NI++R GV IGSEMSG
Sbjct: 297 DRVLIEDCYFDTGDDCIAIKSGRNHDGRRINRPSQNIVIRNCH-MRRGHGGVVIGSEMSG 355
Query: 185 GIFNVTVD--QLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
G+ NV V+ +++ D G+RIKT+ RGG +EN R+I + VK I I +
Sbjct: 356 GVRNVFVEHCEMNSPDLERGLRIKTNSVRGGVVENFFARDITIVEVKNAIVI----DFQY 411
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 291
+EG + P +R I F + + + G + + ++N
Sbjct: 412 EEGDAGEHTPIVRNIDFRGITCAKAERVFQVRGYERSPISNLALRNCDF 460
>gi|237710945|ref|ZP_04541426.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|229454789|gb|EEO60510.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
Length = 446
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/322 (31%), Positives = 156/322 (48%), Gaps = 55/322 (17%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLW------------------------------ 56
LI+ N+ I G GT+DGQG+ WW +
Sbjct: 117 LIYAVDAENITIKG-EGTLDGQGKAWWTEFFRVLVDLRDNGKRNINKYQPMFEKENDLKA 175
Query: 57 --------WNRTL--KHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMT 106
W+ TL + R + + N+ + +T NSPFWT++P +C NV IKG+T
Sbjct: 176 LYAETNEDWHGTLDRRFFRPPFIHPIRCKNVRVEGVTIINSPFWTVNPEFCDNVTIKGIT 235
Query: 107 ILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRV 166
I + +PNTDGI+P+S NV I DC+I GDD + +KSG D + P NI +
Sbjct: 236 I-HNVPSPNTDGINPESCKNVHISDCHISVGDDCITIKSGRDLQARKLGVPCENITITNC 294
Query: 167 SGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKME 226
+ + GV IGSEMSGG+ VT+ G+R+K+ +GRGG +E+I + NI M
Sbjct: 295 TMLSGH-GGVVIGSEMSGGVKKVTISNCVFDGTDRGIRLKSTRGRGGIVEDIRVSNIVMS 353
Query: 227 RVKI-PIRISRGSNDHPDEGWDPKA--LPKIRGISFVNVVSVNTTKAPVL-AGIIGTQFE 282
+K I ++ + P E PK+ P+ R I +V+ V+V P++ G+
Sbjct: 354 NIKKEAIVLNLKYSKMPAE---PKSDRTPEFRNI-YVSGVTVRDVNTPIMVVGLPEAPIT 409
Query: 283 EICMKNVSLLGLAPSAKWQCQF 304
I M++V + +AK +C F
Sbjct: 410 GIVMRDVYI----QNAKQRCVF 427
>gi|291538883|emb|CBL11994.1| Endopolygalacturonase [Roseburia intestinalis XB6B4]
Length = 518
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/281 (33%), Positives = 141/281 (50%), Gaps = 20/281 (7%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNR---TLKHTRGHLVELMNSNNILISNLT 83
+I G + NV+I G GTI+G + WW + R L L + N+ + +T
Sbjct: 184 IITGLDVENVLIYG-RGTINGNASK--ENWWKNPKVMVGAFRPRLFFLSHCQNVTLCGVT 240
Query: 84 FRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAV 143
F+NSP WT+HP + N+ G+TI P ++PNTDG+DP+S NV I GDD +AV
Sbjct: 241 FKNSPSWTLHPYFSDNLKFYGLTINNPSDSPNTDGLDPESCKNVDIVGVKFSLGDDCIAV 300
Query: 144 KSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGV 203
KSG + G PS NI +R+ V +GSEM+GG+ N+ V++ +D G+
Sbjct: 301 KSGKIYMGKKYRTPSENIHIRQCLMENGH-GAVTVGSEMAGGVKNLVVEECRFYDTDRGL 359
Query: 204 RIKTDKGRG--GYIENITIRNIKMERVKIPIRISRGSNDHPDEGWD----------PKAL 251
RIKT +GRG ++ I R I M++V P I+ PD +
Sbjct: 360 RIKTRRGRGKDAVLDQIIFRKIDMDQVMTPFVINCFYFCDPDGKTEFVQSREKMPVDDGT 419
Query: 252 PKIRGISFVNVVSVNT-TKAPVLAGIIGTQFEEICMKNVSL 291
P I + F ++ + N A G+ + E+I MKN+++
Sbjct: 420 PAILRLDFEDIKAQNCHVAAAYFDGLPEQKIEQIIMKNITV 460
>gi|240144096|ref|ZP_04742697.1| putative polygalacturonase [Roseburia intestinalis L1-82]
gi|257203884|gb|EEV02169.1| putative polygalacturonase [Roseburia intestinalis L1-82]
gi|291536249|emb|CBL09361.1| Endopolygalacturonase [Roseburia intestinalis M50/1]
Length = 518
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/281 (33%), Positives = 141/281 (50%), Gaps = 20/281 (7%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNR---TLKHTRGHLVELMNSNNILISNLT 83
+I G + NV+I G GTI+G + WW + R L L + N+ + +T
Sbjct: 184 IITGLDVENVLIYG-RGTINGNASK--ENWWKNPKVMVGAFRPRLFFLSHCQNVTLCGVT 240
Query: 84 FRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAV 143
F+NSP WT+HP + N+ G+TI P ++PNTDG+DP+S NV I GDD +AV
Sbjct: 241 FKNSPSWTLHPYFSDNLKFYGLTINNPSDSPNTDGLDPESCKNVDIVGVKFSLGDDCIAV 300
Query: 144 KSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGV 203
KSG + G PS NI +R+ V +GSEM+GG+ N+ V++ +D G+
Sbjct: 301 KSGKIYMGKKYRTPSENIHIRQCLMENGH-GAVTVGSEMAGGVKNLVVEECRFYDTDRGL 359
Query: 204 RIKTDKGRG--GYIENITIRNIKMERVKIPIRISRGSNDHPDEGWD----------PKAL 251
RIKT +GRG ++ I R I M++V P I+ PD +
Sbjct: 360 RIKTRRGRGKDAVLDQIIFRKIDMDQVMTPFVINCFYFCDPDGKTEFVQSREKMPVDDGT 419
Query: 252 PKIRGISFVNVVSVNT-TKAPVLAGIIGTQFEEICMKNVSL 291
P I + F ++ + N A G+ + E+I MKN+++
Sbjct: 420 PAILRLDFEDIKAQNCHVAAAYFDGLPEQKIEQIIMKNITV 460
>gi|126009432|gb|ABM30197.2| polygalacturonase [Brassica juncea]
Length = 278
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/115 (56%), Positives = 86/115 (74%), Gaps = 1/115 (0%)
Query: 10 LPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKHTRGHLV 69
LPSYG GRE G R+ S IHG +L +V++TG NG+++GQG WW + ++ L HTRG LV
Sbjct: 163 LPSYGYGREHYGPRYGSFIHGQNLKDVVVTGNNGSVNGQGVYWWKKYRSKLLNHTRGPLV 222
Query: 70 ELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAP-LNAPNTDGIDPDS 123
++M S++ + +N+T R+SPFWT+HP C+NV I MTILAP APNTDGIDPDS
Sbjct: 223 QIMWSSDAVFANITLRDSPFWTLHPYDCKNVTITNMTILAPVFEAPNTDGIDPDS 277
>gi|423311776|ref|ZP_17289713.1| hypothetical protein HMPREF1058_00325 [Bacteroides vulgatus
CL09T03C04]
gi|392689891|gb|EIY83166.1| hypothetical protein HMPREF1058_00325 [Bacteroides vulgatus
CL09T03C04]
Length = 446
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/326 (31%), Positives = 157/326 (48%), Gaps = 63/326 (19%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLW------------------------------ 56
LI+ N+ I G GT+DGQG+ WW +
Sbjct: 117 LIYAVDAENITIKG-EGTLDGQGKAWWTEFFRVLVDLRDNGKRNINKYQPMFEKENDLKA 175
Query: 57 --------WNRTL--KHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMT 106
W+ TL + R + + N+ + + NSPFWT++P +C NV IKG+T
Sbjct: 176 LYAETNEDWHGTLDRRFFRPPFIHPIRCKNVRVEGVKIINSPFWTVNPEFCDNVTIKGIT 235
Query: 107 ILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRV 166
I + +PNTDGI+P+S NV I DC+I GDD + +KSG D + P NI +
Sbjct: 236 I-HNVPSPNTDGINPESCKNVHISDCHISVGDDCITIKSGRDLQARKLGVPCENITITNC 294
Query: 167 SGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIE-----NITIR 221
+ + GV IGSEMSGG+ VT+ G+R+K+ +GRGG +E NI +R
Sbjct: 295 TMLSGH-GGVVIGSEMSGGVKKVTISNCIFDGTDRGIRLKSTRGRGGIVEDIRVSNIVMR 353
Query: 222 NIKMERVKIPIRISRGSNDHPDEGWDPKA--LPKIRGISFVNVVSVNTTKAPVL-AGIIG 278
NIK E + + ++ S+ P E PK+ P+ R I +V+ V+V P++ G+
Sbjct: 354 NIKKEAIVLNLKYSK----MPAE---PKSDRTPEFRNI-YVSGVTVRDVNTPIMVVGLPE 405
Query: 279 TQFEEICMKNVSLLGLAPSAKWQCQF 304
I M++V + +AK +C F
Sbjct: 406 APITGIVMRDVYI----QNAKQRCVF 427
>gi|90020600|ref|YP_526427.1| glycoside hydrolase family protein [Saccharophagus degradans 2-40]
gi|89950200|gb|ABD80215.1| polygalacturonase-like protein [Saccharophagus degradans 2-40]
Length = 463
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/274 (33%), Positives = 138/274 (50%), Gaps = 45/274 (16%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQ--MWWDLWWNR--------TLKHTRGHL-------- 68
LI+ TN+ ITG GT+DGQ WW N+ + K +R L
Sbjct: 141 LIYAYGKTNIAITG-KGTLDGQADPTHWWAWKGNKEWGVEGYPSQKESRNQLFAQAEAGD 199
Query: 69 -----------------VELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPL 111
V+ N+LI ++T N+PFW +HP +NV ++G+ + +
Sbjct: 200 PVRERVYADGHYLRPSFVQPYKCENVLIEDITIINAPFWLLHPTLSQNVTVRGVHLESL- 258
Query: 112 NAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTP 171
PN+DG DP+S NV IE+C+ +GDD +A+KSG ++ G +A P+ N+I+R
Sbjct: 259 -GPNSDGCDPESCKNVVIENCFFNTGDDCIAIKSGRNNDGRRLATPTENVIIRNCK-MEA 316
Query: 172 TCSGVGIGSEMSGGIFNVTVDQ--LHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVK 229
GV IGSE+SGG+ NV + + D G+RIKT+ RGG +ENI +RN + V+
Sbjct: 317 GHGGVVIGSEISGGVRNVFAENNVMSSPDLEKGIRIKTNSVRGGLLENIYVRNCTIGEVQ 376
Query: 230 IPIRISRGSNDHPDEGWDPKALPKIRGISFVNVV 263
I I N +EG K P +R + N+V
Sbjct: 377 QAIVI----NFQYEEGDAGKFDPTVRNVEIRNLV 406
>gi|336431286|ref|ZP_08611139.1| hypothetical protein HMPREF0991_00258 [Lachnospiraceae bacterium
2_1_58FAA]
gi|336019012|gb|EGN48745.1| hypothetical protein HMPREF0991_00258 [Lachnospiraceae bacterium
2_1_58FAA]
Length = 519
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/306 (31%), Positives = 152/306 (49%), Gaps = 22/306 (7%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKHTRG----HLVELMNSNNILISNL 82
+++G + +V I G GTIDG W+ WW K RG ++ L ++ I+ +
Sbjct: 182 IMNGIGIKDVTICG-EGTIDGNAS--WENWW-LDAKEVRGAARPRMIFLNRCEDVTITGI 237
Query: 83 TFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVA 142
T +NSP W IHP +C ++ G+T+L P +PNTDG++P+S +V I C GDD +A
Sbjct: 238 TVQNSPSWNIHPYFCSHLKFIGVTVLGPKVSPNTDGLNPESCDDVEITGCLFSVGDDCIA 297
Query: 143 VKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAG 202
VK+G G PSSNI +R+ S + +GSEM+ GI N+ Q + G
Sbjct: 298 VKAGKISVGAKYKVPSSNIRIRQCCMRDGHGS-ITLGSEMAAGIKNLQARQCVFLNTDRG 356
Query: 203 VRIKTDKGRG--GYIENITIRNIKMERVKIPIRISRGSNDHPD------EGWDPKAL--- 251
+RIKT +GRG I+ I +I+M+ V P I+ PD + +P A+
Sbjct: 357 LRIKTRRGRGKDAVIDGILFEDIRMDSVLTPFVINSFYFCDPDGHSEYVQCKEPLAVDER 416
Query: 252 -PKIRGISFVNVVSVNT-TKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQCQFVSGFT 309
P+I+ + F N+ + N A G+ + E + MK++ + +A Q + G
Sbjct: 417 TPQIKELCFRNIQAKNCHVAAAFFYGLPEQKIERVEMKHIQVSYAEDAASGQPAMMDGID 476
Query: 310 SQVFPL 315
+ +
Sbjct: 477 QNICKM 482
>gi|407978683|ref|ZP_11159511.1| glycoside hydrolase [Bacillus sp. HYC-10]
gi|407414714|gb|EKF36344.1| glycoside hydrolase [Bacillus sp. HYC-10]
Length = 463
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/250 (35%), Positives = 133/250 (53%), Gaps = 44/250 (17%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQG--QMWW----------------DLWWNRTLK------ 62
LI+ H N+ ITG +GT+DG+G WW L + K
Sbjct: 144 LIYAHHAENMAITG-SGTLDGRGDEHHWWPWKYGTNGQPSQDRDRQLLFEMAEKRIPVEE 202
Query: 63 -------HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPN 115
+ R ++ NILI +T ++SP W IHPV C NV+++G+ I+ + PN
Sbjct: 203 RVFGEGHYLRSSFIQPYQCQNILIEGVTVKDSPMWQIHPVLCENVIVRGVNIIG--HGPN 260
Query: 116 TDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSG 175
TDG++P+S NV IEDCY ++GDD +A+KSG + G + PS NI++RR + G
Sbjct: 261 TDGVNPESCRNVLIEDCYFDNGDDCIAIKSGRNEDGRRIGVPSENIVIRR-NEMRDGHGG 319
Query: 176 VGIGSEMSGGIFNVTVDQLHVWDAA---AGVRIKTDKGRGGYIENI-----TIRNIKMER 227
V IGSE+SGG+ V + ++ D+ +RIKT+ RGG IE+I T++++K E
Sbjct: 320 VTIGSEISGGVRYVYAED-NIMDSPNLDRALRIKTNSVRGGTIEHIYFKNNTVKSLKHEV 378
Query: 228 VKIPIRISRG 237
V I + G
Sbjct: 379 VCIDMMYEEG 388
>gi|431796309|ref|YP_007223213.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430787074|gb|AGA77203.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 524
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 96/300 (32%), Positives = 143/300 (47%), Gaps = 38/300 (12%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWW--------------------DLW---------- 56
LI+ N+ ITG G IDGQG+ WW +W
Sbjct: 117 LIYAYEAENITITG-RGKIDGQGKDWWMEMYRIHEAAPETLEESKYQKMWTAANEGLETS 175
Query: 57 --WNRT--LKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLN 112
+ +T LK R L++ N+ I +T NSPFWT++P +C NV I G+TI P
Sbjct: 176 PNYQKTMRLKFFRPPLIQPFRCKNVRIEGVTIVNSPFWTVNPAFCDNVTITGVTIENP-P 234
Query: 113 APNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPT 172
+PNTDGI+P S NV I D +I GDD + +KSG D G P+ N+ + + +
Sbjct: 235 SPNTDGINPTSCRNVHISDSHISVGDDCITIKSGRDMDGRKWDTPTENVTITNCTMLS-G 293
Query: 173 CSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKI-P 231
GV IGSE+SG I VT+ G+R+K +GRGG +E I + N+ M+ +++
Sbjct: 294 HGGVVIGSEVSGSIRKVTISNCVFDGTDRGIRLKAARGRGGVVEEIRVDNVVMKDIQLEA 353
Query: 232 IRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 291
I ++ + + EG + P R I NV A + GI ++I N+++
Sbjct: 354 IVMNLFYDKNTKEGPVTEETPAFRNIHISNVTGSQINVAGKILGIPEMPIDQISFSNINM 413
>gi|329954471|ref|ZP_08295562.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328527439|gb|EGF54436.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 467
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 93/292 (31%), Positives = 144/292 (49%), Gaps = 50/292 (17%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQG--QMWWDLW---------------------------- 56
LI+ TN+ ITG GTIDGQG + WW +
Sbjct: 139 LIYAYGETNIAITG-KGTIDGQGSNETWWSMCGAPRYGWKEGMVAQRNGGRERLLMYGET 197
Query: 57 ----WNRTLKHTRG---HLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILA 109
+ R +K G L+ L + N +LI ++T NSPFW IHP++C +++++G+ +
Sbjct: 198 STPIYKRIMKPEDGMRPQLINLYSCNTVLIEDVTLLNSPFWVIHPLFCESLIVRGVHVFN 257
Query: 110 PLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGT 169
PN DG DP+S NV IE+C ++GDD +A+KSG + G PS NIIVR
Sbjct: 258 --RGPNGDGCDPESCKNVLIENCTFDTGDDCIAIKSGRNQDGRKWNIPSENIIVRSCFMK 315
Query: 170 TPTCSGVGIGSEMSGGIFNVTVD--QLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMER 227
GV IGSE+SGG N+ V+ ++ D +RIKT RGG IEN+ +RN+ + +
Sbjct: 316 NGH-GGVVIGSEISGGYRNLFVENCRMDSPDLDRVIRIKTSTCRGGLIENVFVRNVTVGQ 374
Query: 228 VK---IPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGI 276
+ + I + + + + G+ P +R + NV + ++ G+
Sbjct: 375 CREAVLRINLQYENREKCNRGY----APTVRNVHLKNVTCEKSKLGVLIIGL 422
>gi|212694786|ref|ZP_03302914.1| hypothetical protein BACDOR_04320 [Bacteroides dorei DSM 17855]
gi|265750531|ref|ZP_06086594.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
gi|212662640|gb|EEB23214.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
gi|263237427|gb|EEZ22877.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
Length = 446
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 102/322 (31%), Positives = 155/322 (48%), Gaps = 55/322 (17%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLW------------------------------ 56
LI+ N+ I G GT+DGQG+ WW +
Sbjct: 117 LIYAVDAENITIKG-EGTLDGQGKAWWTEFFRVLVDLRDNGKRNINKYQPMFEKENDLKA 175
Query: 57 --------WNRTL--KHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMT 106
W+ TL + R + + N+ + + NSPFWT++P +C NV IKG+T
Sbjct: 176 LYAETNEDWHGTLDRRFFRPPFIHPIRCKNVRVEGVKIINSPFWTVNPEFCDNVTIKGIT 235
Query: 107 ILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRV 166
I + +PNTDGI+P+S NV I DC+I GDD + +KSG D + P NI +
Sbjct: 236 I-HNVPSPNTDGINPESCKNVHISDCHISVGDDCITIKSGRDLQARKLGVPCENITITNC 294
Query: 167 SGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKME 226
+ + GV IGSEMSGG+ VT+ G+R+K+ +GRGG +E+I + NI M
Sbjct: 295 TMLSGH-GGVVIGSEMSGGVKKVTISNCVFDGTDRGIRLKSTRGRGGIVEDIRVSNIVMS 353
Query: 227 RVKI-PIRISRGSNDHPDEGWDPKA--LPKIRGISFVNVVSVNTTKAPVL-AGIIGTQFE 282
+K I ++ + P E PK+ P+ R I +V+ V+V P++ G+
Sbjct: 354 NIKKEAIVLNLKYSKMPAE---PKSDRTPEFRNI-YVSGVTVRDVNTPIMVVGLPEAPIT 409
Query: 283 EICMKNVSLLGLAPSAKWQCQF 304
I M++V + +AK +C F
Sbjct: 410 GIVMRDVYI----QNAKQRCVF 427
>gi|150005260|ref|YP_001300004.1| polygalacturonase [Bacteroides vulgatus ATCC 8482]
gi|149933684|gb|ABR40382.1| glycoside hydrolase family 28, candidate polygalacturonase
[Bacteroides vulgatus ATCC 8482]
Length = 446
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 102/322 (31%), Positives = 155/322 (48%), Gaps = 55/322 (17%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLW------------------------------ 56
LI+ N+ I G GT+DGQG+ WW +
Sbjct: 117 LIYAVDAENITIKG-EGTLDGQGKAWWTEFFRVLVDLRDNGKRNINKYQPMFEKENDLKA 175
Query: 57 --------WNRTL--KHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMT 106
W+ TL + R + + N+ + + NSPFWT++P +C NV IKG+T
Sbjct: 176 LYAETNEDWHGTLDRRFFRPPFIHPIRCKNVRVEGVKIINSPFWTVNPEFCDNVTIKGIT 235
Query: 107 ILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRV 166
I + +PNTDGI+P+S NV I DC+I GDD + +KSG D + P NI +
Sbjct: 236 I-HNVPSPNTDGINPESCKNVHISDCHISVGDDCITIKSGRDLQARKLGVPCENITITNC 294
Query: 167 SGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKME 226
+ + GV IGSEMSGG+ VT+ G+R+K+ +GRGG +E+I + NI M
Sbjct: 295 TMLSGH-GGVVIGSEMSGGVKKVTISNCVFDGTDRGIRLKSTRGRGGIVEDIRVSNIVMS 353
Query: 227 RVKI-PIRISRGSNDHPDEGWDPKA--LPKIRGISFVNVVSVNTTKAPVL-AGIIGTQFE 282
+K I ++ + P E PK+ P+ R I +V+ V+V P++ G+
Sbjct: 354 NIKKEAIVLNLKYSKMPAE---PKSDRTPEFRNI-YVSGVTVRDVNTPIMVVGLPEAPIT 409
Query: 283 EICMKNVSLLGLAPSAKWQCQF 304
I M++V + +AK +C F
Sbjct: 410 GIVMRDVYI----QNAKQRCVF 427
>gi|294777094|ref|ZP_06742551.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|319643453|ref|ZP_07998076.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345517811|ref|ZP_08797274.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|254836521|gb|EET16830.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|294448963|gb|EFG17506.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|317384858|gb|EFV65814.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
Length = 446
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 102/322 (31%), Positives = 155/322 (48%), Gaps = 55/322 (17%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLW------------------------------ 56
LI+ N+ I G GT+DGQG+ WW +
Sbjct: 117 LIYAVDAENITIKG-EGTLDGQGKAWWTEFFRVLVDLRDNGKRNINKYQPMFEKENDLKA 175
Query: 57 --------WNRTL--KHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMT 106
W+ TL + R + + N+ + + NSPFWT++P +C NV IKG+T
Sbjct: 176 LYAETNEDWHGTLDRRFFRPPFIHPIRCKNVRVEGVKIINSPFWTVNPEFCDNVTIKGIT 235
Query: 107 ILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRV 166
I + +PNTDGI+P+S NV I DC+I GDD + +KSG D + P NI +
Sbjct: 236 I-HNVPSPNTDGINPESCKNVHISDCHISVGDDCITIKSGRDLQARKLGVPCENITITNC 294
Query: 167 SGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKME 226
+ + GV IGSEMSGG+ VT+ G+R+K+ +GRGG +E+I + NI M
Sbjct: 295 TMLSGH-GGVVIGSEMSGGVKKVTISNCVFDGTDRGIRLKSTRGRGGIVEDIRVSNIVMS 353
Query: 227 RVKI-PIRISRGSNDHPDEGWDPKA--LPKIRGISFVNVVSVNTTKAPVL-AGIIGTQFE 282
+K I ++ + P E PK+ P+ R I +V+ V+V P++ G+
Sbjct: 354 NIKKEAIVLNLKYSKMPAE---PKSDRTPEFRNI-YVSGVTVRDVNTPIMVVGLPEAPIT 409
Query: 283 EICMKNVSLLGLAPSAKWQCQF 304
I M++V + +AK +C F
Sbjct: 410 GIVMRDVYI----QNAKQRCVF 427
>gi|345516133|ref|ZP_08795626.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|423227918|ref|ZP_17214324.1| hypothetical protein HMPREF1063_00144 [Bacteroides dorei
CL02T00C15]
gi|423239050|ref|ZP_17220166.1| hypothetical protein HMPREF1065_00789 [Bacteroides dorei
CL03T12C01]
gi|423243178|ref|ZP_17224254.1| hypothetical protein HMPREF1064_00460 [Bacteroides dorei
CL02T12C06]
gi|229434099|gb|EEO44176.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|392637665|gb|EIY31531.1| hypothetical protein HMPREF1063_00144 [Bacteroides dorei
CL02T00C15]
gi|392646053|gb|EIY39772.1| hypothetical protein HMPREF1064_00460 [Bacteroides dorei
CL02T12C06]
gi|392647461|gb|EIY41162.1| hypothetical protein HMPREF1065_00789 [Bacteroides dorei
CL03T12C01]
Length = 446
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 102/322 (31%), Positives = 155/322 (48%), Gaps = 55/322 (17%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLW------------------------------ 56
LI+ N+ I G GT+DGQG+ WW +
Sbjct: 117 LIYAVDAENITIKG-EGTLDGQGKAWWTEFFRVLVDLRDNGKRNINKYQPMFEKENDLKA 175
Query: 57 --------WNRTL--KHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMT 106
W+ TL + R + + N+ + + NSPFWT++P +C NV IKG+T
Sbjct: 176 LYAETNEDWHGTLDRRFFRPPFIHPIRCKNVRVEGVKIINSPFWTVNPEFCDNVTIKGIT 235
Query: 107 ILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRV 166
I + +PNTDGI+P+S NV I DC+I GDD + +KSG D + P NI +
Sbjct: 236 I-HNVPSPNTDGINPESCKNVHISDCHISVGDDCITIKSGRDLQARKLGVPCENITITNC 294
Query: 167 SGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKME 226
+ + GV IGSEMSGG+ VT+ G+R+K+ +GRGG +E+I + NI M
Sbjct: 295 TMLSGH-GGVVIGSEMSGGVKKVTISNCVFDGTDRGIRLKSTRGRGGIVEDIRVSNIVMS 353
Query: 227 RVKI-PIRISRGSNDHPDEGWDPKA--LPKIRGISFVNVVSVNTTKAPVL-AGIIGTQFE 282
+K I ++ + P E PK+ P+ R I +V+ V+V P++ G+
Sbjct: 354 NIKKEAIVLNLKYSKMPAE---PKSDRTPEFRNI-YVSGVTVRDVNTPIMVVGLPEAPIT 409
Query: 283 EICMKNVSLLGLAPSAKWQCQF 304
I M++V + +AK +C F
Sbjct: 410 GIVMRDVYI----QNAKQRCVF 427
>gi|373849855|ref|ZP_09592656.1| Polygalacturonase [Opitutaceae bacterium TAV5]
gi|372476020|gb|EHP36029.1| Polygalacturonase [Opitutaceae bacterium TAV5]
Length = 916
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 146/303 (48%), Gaps = 46/303 (15%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKHTRGHLVELMNSNN---------- 76
++ ++ ITG G ++GQGQ WW W KH++ + + +N
Sbjct: 110 FLYAHRCEDISITGA-GLLNGQGQSWWP--W----KHSQPGMSSIQGPDNFAALRTPLEE 162
Query: 77 ----------------------ILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLN-- 112
+LI +TFR+SP WT+ PV+C ++ ++ TIL P +
Sbjct: 163 RVFGTREAGVRPVFCQPIECKRVLIEGVTFRDSPSWTLQPVWCADLTLRHSTILNPPSPF 222
Query: 113 APNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPT 172
+ NTDGIDPD+ NV IE C +++GDD + +K+G D P NI++R +
Sbjct: 223 SHNTDGIDPDACRNVLIEHCVVDTGDDAICIKAGRDEDAWEAGIPCENILIRHCEIRS-G 281
Query: 173 CSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVK-IP 231
G+ IGSEMS G+ N+ +RIKT GRGG+I++I I NI R++
Sbjct: 282 HGGITIGSEMSAGVRNLHAHDCTCDGTDTAIRIKTKPGRGGFIKDILIENITARRIRHAA 341
Query: 232 IRISRGSNDHPDEGWDPKAL---PKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKN 288
+ ++ D ++ DPK L P + I NV + +A L G+ G + + ++N
Sbjct: 342 VELTFHYGDTLEKPPDPKNLKHVPAVENILIRNVRCDSAREALHLRGLPGHPLKNVTLQN 401
Query: 289 VSL 291
+ +
Sbjct: 402 LEI 404
>gi|212693826|ref|ZP_03301954.1| hypothetical protein BACDOR_03347 [Bacteroides dorei DSM 17855]
gi|237709356|ref|ZP_04539837.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|265755031|ref|ZP_06089945.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
gi|423242200|ref|ZP_17223310.1| hypothetical protein HMPREF1065_03933 [Bacteroides dorei
CL03T12C01]
gi|212663715|gb|EEB24289.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
gi|229456741|gb|EEO62462.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|263234642|gb|EEZ20221.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
gi|392639944|gb|EIY33752.1| hypothetical protein HMPREF1065_03933 [Bacteroides dorei
CL03T12C01]
Length = 468
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 81/214 (37%), Positives = 124/214 (57%), Gaps = 8/214 (3%)
Query: 65 RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSS 124
R L+ L N ILI N+T +NSPFW IHP++C ++ ++G+ + + + PN+DG DP+SS
Sbjct: 213 RPQLINLYRCNTILIENVTLKNSPFWVIHPLFCESLTVRGVKVSS--HGPNSDGCDPESS 270
Query: 125 TNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSG 184
NV IE+C ++GDD +A+KSG + G PS NIIVR GV +GSE+SG
Sbjct: 271 KNVLIENCIFDTGDDCIAIKSGRNADGRKWNVPSENIIVRNCE-MKDGHGGVVVGSEISG 329
Query: 185 GIFNVTVD--QLHVWDAAAGVRIKTDKGRGGYIENITIRNIKM-ERVKIPIRISRGSNDH 241
G N+ V+ ++ + +RIKT+ RGG IENI +RNI++ E + ++I+ +
Sbjct: 330 GYKNLFVENCKMDSPNLERVIRIKTNNCRGGVIENIYVRNIEVGECREAVLKINLQYENR 389
Query: 242 PDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAG 275
E D P +R + NV S + ++ G
Sbjct: 390 --EKCDRSFPPVVRHVYLDNVTSEKSKYGVLITG 421
>gi|423232717|ref|ZP_17219117.1| hypothetical protein HMPREF1063_04937 [Bacteroides dorei
CL02T00C15]
gi|423247409|ref|ZP_17228459.1| hypothetical protein HMPREF1064_04665 [Bacteroides dorei
CL02T12C06]
gi|392623156|gb|EIY17261.1| hypothetical protein HMPREF1063_04937 [Bacteroides dorei
CL02T00C15]
gi|392632549|gb|EIY26508.1| hypothetical protein HMPREF1064_04665 [Bacteroides dorei
CL02T12C06]
Length = 468
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 81/214 (37%), Positives = 124/214 (57%), Gaps = 8/214 (3%)
Query: 65 RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSS 124
R L+ L N ILI N+T +NSPFW IHP++C ++ ++G+ + + + PN+DG DP+SS
Sbjct: 213 RPQLINLYRCNTILIENVTLKNSPFWVIHPLFCESLTVRGVKVSS--HGPNSDGCDPESS 270
Query: 125 TNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSG 184
NV IE+C ++GDD +A+KSG + G PS NIIVR GV +GSE+SG
Sbjct: 271 KNVLIENCIFDTGDDCIAIKSGRNADGRKWNVPSENIIVRNCE-MKDGHGGVVVGSEISG 329
Query: 185 GIFNVTVD--QLHVWDAAAGVRIKTDKGRGGYIENITIRNIKM-ERVKIPIRISRGSNDH 241
G N+ V+ ++ + +RIKT+ RGG IENI +RNI++ E + ++I+ +
Sbjct: 330 GYKNLFVENCKMDSPNLERVIRIKTNNCRGGVIENIYVRNIEVGECREAVLKINLQYENR 389
Query: 242 PDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAG 275
E D P +R + NV S + ++ G
Sbjct: 390 --EKCDRSFPPVVRHVYLDNVTSEKSKYGVLITG 421
>gi|319644236|ref|ZP_07998749.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345519913|ref|ZP_08799321.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|254836217|gb|EET16526.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|317384227|gb|EFV65199.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
Length = 468
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 81/214 (37%), Positives = 124/214 (57%), Gaps = 8/214 (3%)
Query: 65 RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSS 124
R L+ L N ILI N+T +NSPFW IHP++C ++ ++G+ + + + PN+DG DP+SS
Sbjct: 213 RPQLINLYRCNTILIENVTLKNSPFWVIHPLFCESLTVRGVKVSS--HGPNSDGCDPESS 270
Query: 125 TNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSG 184
NV IE+C ++GDD +A+KSG + G PS NIIVR GV +GSE+SG
Sbjct: 271 KNVLIENCIFDTGDDCIAIKSGRNADGRKWNVPSENIIVRNCE-MKDGHGGVVVGSEISG 329
Query: 185 GIFNVTVD--QLHVWDAAAGVRIKTDKGRGGYIENITIRNIKM-ERVKIPIRISRGSNDH 241
G N+ V+ ++ + +RIKT+ RGG IENI +RN+++ E + ++I+ +
Sbjct: 330 GYKNLFVENCKMDSPNLERVIRIKTNNCRGGVIENIYVRNVEVGECREAVLKINLQYENR 389
Query: 242 PDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAG 275
E D P +R I NV S + ++ G
Sbjct: 390 --EKCDRNFPPVVRHIYLDNVTSEKSKYGVLITG 421
>gi|325842985|ref|ZP_08167837.1| polygalacturonase (pectinase) [Turicibacter sp. HGF1]
gi|325489511|gb|EGC91879.1| polygalacturonase (pectinase) [Turicibacter sp. HGF1]
Length = 415
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 128/213 (60%), Gaps = 6/213 (2%)
Query: 26 SLIHGDHLTNVIITGYNGTIDGQGQM-WWDLWWNRTLKHTRGHLVELMNSNNILISNLTF 84
+LI G +++NV + G G +DG G + WWD R + R L ++++S+++ + +T
Sbjct: 72 ALIQGVNVSNVNLIG-EGVLDGNGSIGWWDFPKVRNVA-WRPRLFQIIHSHHVNVQGITL 129
Query: 85 RNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVK 144
+NSP WT+HP++ ++ + I+ P ++PNTDG+DP+S V I + GDD +A+K
Sbjct: 130 QNSPSWTVHPLFSDDLKFIDLKIINPKDSPNTDGLDPESCHRVLILGVHFSVGDDCIAIK 189
Query: 145 SGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVR 204
SG + G + R S I +R S V IGSEM+GG+ ++ V+Q + G+R
Sbjct: 190 SGKIYLGSRLKRASEYITIRNCSMNFGH-GAVVIGSEMAGGVKHILVEQCLFNETDRGLR 248
Query: 205 IKTDKGRG--GYIENITIRNIKMERVKIPIRIS 235
IKT +GRG +E++T R+I+ME+V P+ ++
Sbjct: 249 IKTRRGRGEAAIVEDVTFRHIEMEKVLTPLVVN 281
>gi|293375683|ref|ZP_06621956.1| polygalacturonase (pectinase) [Turicibacter sanguinis PC909]
gi|292645734|gb|EFF63771.1| polygalacturonase (pectinase) [Turicibacter sanguinis PC909]
Length = 526
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 128/213 (60%), Gaps = 6/213 (2%)
Query: 26 SLIHGDHLTNVIITGYNGTIDGQGQM-WWDLWWNRTLKHTRGHLVELMNSNNILISNLTF 84
+LI G +++NV + G G +DG G + WWD R + R L ++++S+++ + +T
Sbjct: 183 ALIQGVNVSNVNLIG-EGVLDGNGSIGWWDFPKVRNVAW-RPRLFQIIHSHHVNVQGITL 240
Query: 85 RNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVK 144
+NSP WT+HP++ ++ + I+ P ++PNTDG+DP+S V I + GDD +A+K
Sbjct: 241 QNSPSWTVHPLFSDDLKFIDLKIINPKDSPNTDGLDPESCHRVLILGVHFSVGDDCIAIK 300
Query: 145 SGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVR 204
SG + G + R S I +R S V IGSEM+GG+ ++ V+Q + G+R
Sbjct: 301 SGKIYLGSRLKRASEYITIRNCSMNFGH-GAVVIGSEMAGGVKHILVEQCLFNETDRGLR 359
Query: 205 IKTDKGRG--GYIENITIRNIKMERVKIPIRIS 235
IKT +GRG +E++T R+I+ME+V P+ ++
Sbjct: 360 IKTRRGRGEAAIVEDVTFRHIEMEKVLTPLVVN 392
>gi|189464497|ref|ZP_03013282.1| hypothetical protein BACINT_00839 [Bacteroides intestinalis DSM
17393]
gi|189438287|gb|EDV07272.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 492
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/317 (31%), Positives = 141/317 (44%), Gaps = 60/317 (18%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLWW---NRTLKHTRGHL--------------- 68
LI+ NV I+G GT+DG G WW LW + +K G L
Sbjct: 112 LIYAHSADNVTISG-RGTLDGNGLKWW-LWEFDTRKVIKENGGKLPTLDKLQQMWVDANK 169
Query: 69 ---------------------VELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTI 107
++ NILI N+ NSPFWTI+P +C NV I G+TI
Sbjct: 170 DLEISDYYKPSLERRMFRPPFIQFYECTNILIENVKIINSPFWTINPAFCDNVTIHGVTI 229
Query: 108 LAPLN---APNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVR 164
P + PNTDGI+P S NV I DC+I GDD + +KSG D G + NI +
Sbjct: 230 NNPSSNPKGPNTDGINPSSCRNVRISDCFISVGDDCITIKSGRDADGRKYGKACENITIT 289
Query: 165 R---VSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIR 221
+SG GV IGSEMSGG+ V + AG+R+K +GRGG +E+I +
Sbjct: 290 NCIMLSGH----GGVVIGSEMSGGVKRVAISNCVFDGTNAGIRLKASRGRGGVVEDIRVD 345
Query: 222 NIKMERVK-----IPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGI 276
NI M+ ++ + R S P + P R I NV + + + GI
Sbjct: 346 NIVMKNIQGDAFIFDLFYDRLSKVEPVS----ERTPIFRNIHLSNVTGNDIKRIGYIKGI 401
Query: 277 IGTQFEEICMKNVSLLG 293
E+ N++++
Sbjct: 402 EEMPVSELSFSNMNIVA 418
>gi|167763470|ref|ZP_02435597.1| hypothetical protein BACSTE_01844 [Bacteroides stercoris ATCC
43183]
gi|167698764|gb|EDS15343.1| polygalacturonase (pectinase) [Bacteroides stercoris ATCC 43183]
Length = 467
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/292 (31%), Positives = 144/292 (49%), Gaps = 50/292 (17%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQG--QMWWDLW---------------------------- 56
LI+ TN+ ITG GTIDGQG + WW +
Sbjct: 139 LIYAYGETNIAITG-KGTIDGQGSNETWWPMCGASRYGWKEGMVAQRNGGRERLLMYGET 197
Query: 57 ----WNRTLKHTRG---HLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILA 109
+ R +K G L+ L + N +LI ++T NSPFW IHP++C +++++G+ +
Sbjct: 198 STPVYKRIMKPEDGMRPQLINLYSCNTVLIEDVTLLNSPFWVIHPLFCESLIVRGVHVFN 257
Query: 110 PLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGT 169
PN DG DP+S NV IE+C ++GDD +A+KSG + G PS NIIVR
Sbjct: 258 --RGPNGDGCDPESCKNVLIENCTFDTGDDCIAIKSGRNQDGRKWNIPSENIIVRGCFMK 315
Query: 170 TPTCSGVGIGSEMSGGIFNVTVD--QLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMER 227
GV IGSE+SGG N+ V+ ++ D +RIKT RGG IEN+ +RN+ + +
Sbjct: 316 NGH-GGVVIGSEISGGYRNLFVENCRMDSPDLDRVIRIKTSTCRGGLIENVFVRNVTVGQ 374
Query: 228 VK---IPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGI 276
+ + I + + + + G+ P +R + NV + ++ G+
Sbjct: 375 CREAVLRINLQYENREKCNRGY----APTVRNVHLKNVTCEKSKLGVLIIGL 422
>gi|345513234|ref|ZP_08792756.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|229437148|gb|EEO47225.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
Length = 468
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/214 (37%), Positives = 124/214 (57%), Gaps = 8/214 (3%)
Query: 65 RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSS 124
R L+ L N ILI N+T +NSPFW IHP++C ++ ++G+ + + + PN+DG DP+SS
Sbjct: 213 RPQLINLYRCNTILIENVTLKNSPFWVIHPLFCESLTVRGVKVSS--HGPNSDGCDPESS 270
Query: 125 TNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSG 184
NV IE+C ++GDD +A+KSG + G PS NIIVR GV +GSE+SG
Sbjct: 271 KNVLIENCIFDTGDDCIAIKSGRNADGRKWNVPSENIIVRNCE-MKDGHGGVVVGSEISG 329
Query: 185 GIFNVTVD--QLHVWDAAAGVRIKTDKGRGGYIENITIRNIKM-ERVKIPIRISRGSNDH 241
G N+ V+ ++ + +RIKT+ RGG IENI +RNI++ E + ++I+ +
Sbjct: 330 GYKNLFVENCKMDSPNLERIIRIKTNNCRGGVIENIYVRNIEVGECREAVLKINLQYENR 389
Query: 242 PDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAG 275
E D P +R + NV S + ++ G
Sbjct: 390 --EKCDRSFPPVVRHVYLDNVTSEKSKYGVLITG 421
>gi|410634542|ref|ZP_11345177.1| exo-poly-alpha-D-galacturonosidase [Glaciecola arctica BSs20135]
gi|410145928|dbj|GAC22044.1| exo-poly-alpha-D-galacturonosidase [Glaciecola arctica BSs20135]
Length = 477
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/306 (32%), Positives = 156/306 (50%), Gaps = 49/306 (16%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQG--QMWWDLW---WNRTL---------KHTRGHLVELM 72
LI+ TNV ITG G ++G G Q WW W W ++ K TR L E+
Sbjct: 150 LIYAYKKTNVAITG-KGILEGGGSEQHWWP-WKGPWKKSTWGDDPIENQKFTRDVLREMA 207
Query: 73 NSN------------------------NILISNLTFRNSPFWTIHPVYCRNVVIKGMTIL 108
N+LI +T +NSPFW ++PV C+NV ++ I
Sbjct: 208 EQELPVAQRVFKNNYLRPPFIQPYACINVLIEGVTIKNSPFWLVNPVLCKNVTVR--NIH 265
Query: 109 APLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSG 168
+ PN+DG DP++ T+V IE+C ++GDD +A+KSG + G + +P NI++
Sbjct: 266 CDSHGPNSDGCDPEACTDVLIENCIFDTGDDCIAIKSGRNADGRRVGQPCENILINNCQM 325
Query: 169 TTPTCSGVGIGSEMSGGIFNVTVD--QLHVWDAAAGVRIKTDKGRGGYIENITIRNIKME 226
+ GV IGSE+SGG+ N+ ++ D G+RIKT+ RGG+++N+ R+I++
Sbjct: 326 RSGH-GGVVIGSEISGGVRNLYAQNCEMSSPDLDRGIRIKTNSIRGGHLKNLNYRDIRIG 384
Query: 227 RVKIPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICM 286
+VK + I N + +EG K P + I+ N+ + T+A L G T + +
Sbjct: 385 QVKEAVVI----NFYYEEGDVGKFTPVLEDINIENLYVEHATRAFSLRGYPHTPITGVSI 440
Query: 287 KNVSLL 292
KN+++L
Sbjct: 441 KNLTIL 446
>gi|320107891|ref|YP_004183481.1| glycoside hydrolase family protein [Terriglobus saanensis SP1PR4]
gi|319926412|gb|ADV83487.1| glycoside hydrolase family 28 [Terriglobus saanensis SP1PR4]
Length = 408
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/265 (33%), Positives = 136/265 (51%), Gaps = 22/265 (8%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWWNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHP 94
++ ITG G IDG+G+ WW R L+ + +I + N+T +NS W I P
Sbjct: 119 DITITG-GGVIDGRGESWWP-----QPNLPRPRLIVFDHCKHIRMENITAQNSAMWQIVP 172
Query: 95 VYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAM 154
Y ++V + M +LAP + NTDGIDP +ST + I+ YI++GDD VA+KSG
Sbjct: 173 YYSDDLVFRNMKVLAPQTSHNTDGIDPFASTKIVIDHVYIDTGDDNVAIKSGQP------ 226
Query: 155 ARPSSNIIVRRVSGTTPTCS-----GVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDK 209
P ++ R + T C G+ IGSE++GG+ NV +++H G+R+K+++
Sbjct: 227 GSPGPDLPSRDI--TITDCEFLHGHGLSIGSEIAGGVQNVRAERIHFKGTDQGIRVKSNR 284
Query: 210 GRGGYIENITIRNIKMERVKIPIRISRGSNDHPD---EGWDPKALPKIRGISFVNVVSVN 266
RG I N R+I ME VK I +S PD E + P I+ NV +V
Sbjct: 285 DRGNDIGNFVFRDITMENVKTAILLSEFYPKIPDTITEEPVTRLTPHFHDITIENVQAVG 344
Query: 267 TTKAPVLAGIIGTQFEEICMKNVSL 291
+ A V+ G+ + + + NV +
Sbjct: 345 SRDAAVIVGLPESPIRNLKLTNVHI 369
>gi|404484304|ref|ZP_11019517.1| hypothetical protein HMPREF1135_02577 [Clostridiales bacterium
OBRC5-5]
gi|404342621|gb|EJZ68992.1| hypothetical protein HMPREF1135_02577 [Clostridiales bacterium
OBRC5-5]
Length = 526
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/282 (34%), Positives = 141/282 (50%), Gaps = 20/282 (7%)
Query: 26 SLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKHT---RGHLVELMNSNNILISNL 82
+LI G + NV+I G G +DG M WW K R + V L N NI + L
Sbjct: 183 ALITGISVENVLIFG-EGILDGNAGMLD--WWKDAKKKNIAWRPNTVFLHNCKNIAMQGL 239
Query: 83 TFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVA 142
NSP WT+HP Y N++ TI+ P N+PNTDG+DP+S NV I I GDD VA
Sbjct: 240 CIMNSPSWTVHPYYSDNLLFLNNTIMNPDNSPNTDGLDPESCENVLILGADISVGDDCVA 299
Query: 143 VKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAG 202
+KSG + + +P+ NI++R S V IGSE++ G+++V+V++ G
Sbjct: 300 IKSGKYYMALKHYKPAKNIVIRN-SIFRKGHGSVTIGSEVAAGVYDVSVEKCIFEGTDRG 358
Query: 203 VRIKTDKGRG--GYIENITIRNIKMERVKIPIRISRGSNDHPDEGWD----------PKA 250
+RIKT +GRG ++NI NI M+ V +P + PD D +
Sbjct: 359 LRIKTRRGRGEKSVLDNICFENIIMKDVCMPFTANMFYFCDPDGHSDYVQNQDKMEVNEK 418
Query: 251 LPKIRGISFVNVVSVNTTKA-PVLAGIIGTQFEEICMKNVSL 291
PKI I+ ++ N L G+ EEI ++N++L
Sbjct: 419 TPKIGKIAARDIRCENVKNIFACLYGLPEMPVEEIVLENITL 460
>gi|329960859|ref|ZP_08299138.1| polygalacturonase [Bacteroides fluxus YIT 12057]
gi|328532145|gb|EGF58949.1| polygalacturonase [Bacteroides fluxus YIT 12057]
Length = 488
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/290 (33%), Positives = 142/290 (48%), Gaps = 46/290 (15%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQG--QMWWDLW---------------------------- 56
LI+ TN+ ITG GTIDGQG + WW +
Sbjct: 160 LIYAYGETNIAITG-KGTIDGQGSKETWWPMCGAPRYGWKEGMVAQRNGGRERLLMYGET 218
Query: 57 ----WNRTLKHTRG---HLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILA 109
+ R +K G LV L + N +LI ++T NSPFW IHP++C ++ ++G+ +
Sbjct: 219 STPIYKRVMKPEDGLRPQLVNLYSCNTVLIEDITLLNSPFWVIHPLFCESLTVRGVKVFN 278
Query: 110 PLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGT 169
PN DG DP+S NV IE+C ++GDD +A+KSG + G PS NIIVR
Sbjct: 279 --RGPNGDGCDPESCKNVLIENCTFDTGDDCIAIKSGRNADGRKWNIPSENIIVRNCFMK 336
Query: 170 TPTCSGVGIGSEMSGGIFNVTVD--QLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMER 227
GV IGSE+SGG N+ V+ Q+ + +RIKT RGG IEN+ +RN+ + +
Sbjct: 337 NGH-GGVVIGSEISGGYRNLYVENCQMDSPNLDRVIRIKTSTCRGGIIENVFVRNVTVGQ 395
Query: 228 VKIPI-RISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGI 276
+ + RI+ + E D P +R + NV + ++ G+
Sbjct: 396 CREAVLRINLQYENR--EKCDRSFPPVVRNVHLKNVTCEKSKLGILIIGL 443
>gi|423312702|ref|ZP_17290639.1| hypothetical protein HMPREF1058_01251 [Bacteroides vulgatus
CL09T03C04]
gi|392687436|gb|EIY80729.1| hypothetical protein HMPREF1058_01251 [Bacteroides vulgatus
CL09T03C04]
Length = 468
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/214 (37%), Positives = 124/214 (57%), Gaps = 8/214 (3%)
Query: 65 RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSS 124
R L+ L N ILI N+T +NSPFW IHP++C ++ ++G+ + + + PN+DG DP+SS
Sbjct: 213 RPQLINLYRCNTILIENVTLKNSPFWVIHPLFCESLTVRGVKVSS--HGPNSDGCDPESS 270
Query: 125 TNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSG 184
NV IE+C ++GDD +A+KSG + G PS NIIVR GV +GSE+SG
Sbjct: 271 KNVLIENCIFDTGDDCIAIKSGRNADGRKWNVPSENIIVRNCE-MKDGHGGVVVGSEISG 329
Query: 185 GIFNVTVD--QLHVWDAAAGVRIKTDKGRGGYIENITIRNIKM-ERVKIPIRISRGSNDH 241
G N+ V+ ++ + +RIKT+ RGG IENI +RN+++ E + ++I+ +
Sbjct: 330 GYKNLFVENCKMDSPNLERVIRIKTNNCRGGVIENIYVRNVEVGECREAVLKINLQYENR 389
Query: 242 PDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAG 275
E D P +R + NV S + ++ G
Sbjct: 390 --EKCDRSFPPVVRHVYLDNVTSEKSKYGVLITG 421
>gi|150004301|ref|YP_001299045.1| polygalacturonase [Bacteroides vulgatus ATCC 8482]
gi|294776888|ref|ZP_06742351.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|149932725|gb|ABR39423.1| glycoside hydrolase family 28, candidate polygalacturonase
[Bacteroides vulgatus ATCC 8482]
gi|294449364|gb|EFG17901.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 468
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/214 (37%), Positives = 124/214 (57%), Gaps = 8/214 (3%)
Query: 65 RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSS 124
R L+ L N ILI N+T +NSPFW IHP++C ++ ++G+ + + + PN+DG DP+SS
Sbjct: 213 RPQLINLYRCNTILIENVTLKNSPFWVIHPLFCESLTVRGVKVSS--HGPNSDGCDPESS 270
Query: 125 TNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSG 184
NV IE+C ++GDD +A+KSG + G PS NIIVR GV +GSE+SG
Sbjct: 271 KNVLIENCIFDTGDDCIAIKSGRNADGRKWNVPSENIIVRNCE-MKDGHGGVVVGSEISG 329
Query: 185 GIFNVTVD--QLHVWDAAAGVRIKTDKGRGGYIENITIRNIKM-ERVKIPIRISRGSNDH 241
G N+ V+ ++ + +RIKT+ RGG IENI +RN+++ E + ++I+ +
Sbjct: 330 GYKNLFVENCKMDSPNLERVIRIKTNNCRGGVIENIYVRNVEVGECREAVLKINLQYENR 389
Query: 242 PDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAG 275
E D P +R + NV S + ++ G
Sbjct: 390 --EKCDRNFPPVVRHVYLDNVTSEKSKYGVLITG 421
>gi|414864494|tpg|DAA43051.1| TPA: hypothetical protein ZEAMMB73_419161 [Zea mays]
Length = 220
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 58/97 (59%), Positives = 77/97 (79%)
Query: 1 MDEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRT 60
M WP+I PLPSYGRGR+ G R+ + I G +LT+VIITG NGTI+GQGQ+WWD + +
Sbjct: 116 MKHWPLIAPLPSYGRGRDEPGPRYSNFIGGSNLTDVIITGKNGTINGQGQVWWDKFHAKE 175
Query: 61 LKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYC 97
LK TRGHL+EL+ S+NI+ISN+TF ++P+W +HP YC
Sbjct: 176 LKFTRGHLLELLYSDNIIISNVTFVDAPYWNLHPTYC 212
>gi|224536535|ref|ZP_03677074.1| hypothetical protein BACCELL_01410 [Bacteroides cellulosilyticus
DSM 14838]
gi|224521791|gb|EEF90896.1| hypothetical protein BACCELL_01410 [Bacteroides cellulosilyticus
DSM 14838]
Length = 491
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/317 (31%), Positives = 141/317 (44%), Gaps = 60/317 (18%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRT---LKHTRGHL--------------- 68
LI+ N+ ITG GT+DG G WW LW T +K G L
Sbjct: 112 LIYAHSADNLTITG-RGTLDGNGLKWW-LWEFETRKVIKENGGKLPSLDKLQQMWVDANN 169
Query: 69 ---------------------VELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTI 107
++ NILI N+ NSPFWT++P +C NV I G+TI
Sbjct: 170 DLEISDYYKPSLERKMFRPPFIQFYECTNILIENVKIINSPFWTVNPAFCDNVTIHGVTI 229
Query: 108 LAPLN---APNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVR 164
P + PNTDGI+P S NV I DC+I GDD + +KSG D G + NI +
Sbjct: 230 NNPSSNPKGPNTDGINPSSCRNVRISDCFISVGDDCITIKSGRDADGRKYGKACENITIT 289
Query: 165 R---VSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIR 221
+SG GV IGSEMSGG+ + + AG+R+K +GRGG +E+I +
Sbjct: 290 NCIMLSGH----GGVVIGSEMSGGVKRIAISNCVFDGTNAGIRLKASRGRGGVVEDIRVD 345
Query: 222 NIKMERVK-----IPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGI 276
NI M+ ++ + R S P + P R I NV + + + GI
Sbjct: 346 NIVMKNIQGDAFIFDLFYDRLSKVEPVS----ERTPIFRNIHLSNVTGNDIKRIGYIKGI 401
Query: 277 IGTQFEEICMKNVSLLG 293
E+ N++++
Sbjct: 402 EEMPISELSFSNMNIVA 418
>gi|423223595|ref|ZP_17210064.1| hypothetical protein HMPREF1062_02250 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392638220|gb|EIY32067.1| hypothetical protein HMPREF1062_02250 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 491
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/317 (31%), Positives = 141/317 (44%), Gaps = 60/317 (18%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRT---LKHTRGHL--------------- 68
LI+ N+ ITG GT+DG G WW LW T +K G L
Sbjct: 112 LIYAHSADNLTITG-RGTLDGNGLKWW-LWEFETRKVIKENGGKLPSLDKLQQMWVDANK 169
Query: 69 ---------------------VELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTI 107
++ NILI N+ NSPFWT++P +C NV I G+TI
Sbjct: 170 DLEISDYYKPSLERKMFRPPFIQFYECTNILIENVKIINSPFWTVNPAFCDNVTIHGVTI 229
Query: 108 LAPLN---APNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVR 164
P + PNTDGI+P S NV I DC+I GDD + +KSG D G + NI +
Sbjct: 230 NNPSSNPKGPNTDGINPSSCRNVRISDCFISVGDDCITIKSGRDADGRKYGKACENITIT 289
Query: 165 R---VSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIR 221
+SG GV IGSEMSGG+ + + AG+R+K +GRGG +E+I +
Sbjct: 290 NCIMLSGH----GGVVIGSEMSGGVKRIAISNCVFDGTNAGIRLKASRGRGGVVEDIRVD 345
Query: 222 NIKMERVK-----IPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGI 276
NI M+ ++ + R S P + P R I NV + + + GI
Sbjct: 346 NIVMKNIQGDAFIFDLFYDRLSKVEPVS----ERTPIFRNIHLSNVTGNDIKRIGYIKGI 401
Query: 277 IGTQFEEICMKNVSLLG 293
E+ N++++
Sbjct: 402 EEMPISELSFSNMNIVA 418
>gi|160936546|ref|ZP_02083913.1| hypothetical protein CLOBOL_01436 [Clostridium bolteae ATCC
BAA-613]
gi|158440337|gb|EDP18082.1| hypothetical protein CLOBOL_01436 [Clostridium bolteae ATCC
BAA-613]
Length = 522
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/302 (31%), Positives = 150/302 (49%), Gaps = 18/302 (5%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNR-TLKHT--RGHLVELMNSNNILISNLT 83
+I+G ++ +I G GTIDG WW+ + HT R ++ L + + +T
Sbjct: 183 IINGVNVKGAVIYG-QGTIDGNAGDSEGNWWHEPKVIHTACRPRMIFLERCRQVTVQGIT 241
Query: 84 FRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAV 143
RNSP W IHP + ++ + +L P ++PNTDG+DP+S +V I Y GDD +AV
Sbjct: 242 VRNSPSWNIHPYFSDHLRFFDLKVLNPKDSPNTDGLDPESCQDVEIAGVYFSLGDDCIAV 301
Query: 144 KSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGV 203
KSG + G RPS +I +RR S V IGSEM+GG+ N+TV G+
Sbjct: 302 KSGKIYMGSTYKRPSKDISIRRCCMRDGHGS-VTIGSEMAGGVKNLTVKDCMFLHTDRGL 360
Query: 204 RIKTDKGRG--GYIENITIRNIKMERVKIPIRIS----RGSNDHPDEGWDPKAL------ 251
RIKT +GRG ++ I +I+M+ V P I+ + H + +AL
Sbjct: 361 RIKTRRGRGKDAVVDGIVFEHIRMDHVMTPFVINCFYFCDPDGHSEYVRTKEALLVDERT 420
Query: 252 PKIRGISFVNVVSVNT-TKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQCQFVSGFTS 310
P I+ + F ++ + N A + G+ + E + M +V + A + + Q + G +S
Sbjct: 421 PLIKSLCFKDIEAENCHVAAAYMYGLPEQRIERVEMDHVRVTYAASAREGQPAMMDGCSS 480
Query: 311 QV 312
+
Sbjct: 481 HI 482
>gi|325299708|ref|YP_004259625.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324319261|gb|ADY37152.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 468
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/293 (32%), Positives = 140/293 (47%), Gaps = 52/293 (17%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQG--QMWWDLW------WNRTLKHT-------------- 64
LI+ TN+ +TG G IDGQG + WW + W ++
Sbjct: 139 LIYAYGETNIALTG-KGVIDGQGSNENWWYMCGAPRYGWKEGMRSQKLGSRERLMGYAEL 197
Query: 65 ---------------RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILA 109
R L+ + N +LI ++T NSPFW IHP++C +++++G+ I
Sbjct: 198 KRPIYERVMTPEDGLRPQLINFYSCNTVLIEDVTLLNSPFWVIHPLFCESLIVRGVKIFN 257
Query: 110 PLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGT 169
PN DG DP+S NV IE+C ++GDD +A+KSG + G PS NI+VR
Sbjct: 258 --RGPNGDGCDPESCKNVLIENCRFDTGDDCIAIKSGRNEDGRKWNIPSENIVVRNCEMK 315
Query: 170 TPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAA---GVRIKTDKGRGGYIENITIRNIKME 226
GV IGSE+SGG N+ V+ V D+ +RIKT RGG IEN+ +RNIK+
Sbjct: 316 NGH-GGVVIGSEISGGYRNLYVEDC-VMDSPQLDRVIRIKTSTCRGGVIENVFVRNIKVG 373
Query: 227 RVK---IPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGI 276
+ + I + + + G+D P +R + NV + V G+
Sbjct: 374 QCNEAVLRINLKYEEREQCNRGFD----PTVRNVHLKNVTCEKSRYGIVAIGL 422
>gi|225874241|ref|YP_002755700.1| polygalacturonase [Acidobacterium capsulatum ATCC 51196]
gi|225791499|gb|ACO31589.1| polygalacturonase [Acidobacterium capsulatum ATCC 51196]
Length = 428
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 149/289 (51%), Gaps = 26/289 (8%)
Query: 19 RLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRT------LKHTRGHLVELM 72
R GR SLI + +N+ I G GTI+G G WW + ++TR L+
Sbjct: 111 RAPGRQ-SLISAQNASNITIEGA-GTINGNGASWWKMAREHKDTGVMGSQYTRPRLIVFN 168
Query: 73 NSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDC 132
+ ++++ +T NSP W I P Y +V+I+ + +LAP +APNTD IDP SS++V IE
Sbjct: 169 HCKHVVLEGVTVENSPMWQIVPYYSDDVIIRNIHVLAPQHAPNTDAIDPFSSSHVLIEHV 228
Query: 133 YIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTC-----SGVGIGSEMSGGIF 187
GDD +A+KSG + A PS+ I +R C G+ +GSE++GG
Sbjct: 229 VANVGDDDIAIKSGEANSPGPDA-PSTYITIR-------DCIFLHGHGLSVGSEIAGGAQ 280
Query: 188 NVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISR-GSNDHPDEGW 246
++ + + + G+R+K ++ RG + ++ +NI+M VK + IS + +P
Sbjct: 281 HILAENITMTGTDNGIRVKANRDRGNDVSDLVFKNIQMTNVKNALIISEFYPHIYPPMPD 340
Query: 247 DPKAL----PKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 291
+P + P I+ NV + N+ A +AG+ ++ +KNVS+
Sbjct: 341 NPAPITRLTPHFHNITVENVTATNSKNAGAIAGLPEAPIRDVVLKNVSI 389
>gi|390933294|ref|YP_006390799.1| glycoside hydrolase family protein [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
gi|389568795|gb|AFK85200.1| glycoside hydrolase family 28 [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 518
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/309 (33%), Positives = 145/309 (46%), Gaps = 23/309 (7%)
Query: 26 SLIHGDHLTNVIITGYNGTIDGQGQMWWDLWW-NRTLKHT--RGHLVELMNSNNILISNL 82
SLI G + NV I G +G IDG +D WW + +K R V L N+LI +
Sbjct: 183 SLITGISVENVNIIG-DGVIDGNSS--FDTWWYDAKVKRIAWRPRTVYLNKCKNVLIEGI 239
Query: 83 TFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVA 142
T RNSP WTIHP+ +N+ + I P +APNTDG+DP+S +V I GDD +A
Sbjct: 240 TIRNSPSWTIHPLMSQNLKFINLNIENPKDAPNTDGLDPESCKDVLIAGTRFSVGDDCIA 299
Query: 143 VKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAG 202
+KSG + PS N+ +R V IGSEMSGG+ NV V+ G
Sbjct: 300 IKSGKLSVSQKLPMPSENLYIRNCL-MEYGHGAVVIGSEMSGGVKNVHVENCVFKKTDRG 358
Query: 203 VRIKTDKGRG--GYIENITIRNIKMERVKIPIRISR----GSNDHPDEGWDPKAL----- 251
+RIKT +GRG G I+ I NIKME V P I+ ++ + W + L
Sbjct: 359 IRIKTRRGRGKTGIIDEIHAANIKMEGVLTPFTINSFYFCDADGKTEYVWSKEKLPVDDR 418
Query: 252 -PKIRGISFVNVVSVNT-TKAPVLAGIIGTQFEEICMKNVSL---LGLAPSAKWQCQFVS 306
P + I N+ ++ A + G+ + E + M+N+ + L P FV
Sbjct: 419 TPYVGNIYLKNITCIDAHVAAGYMYGLPERKIERVDMENIYVSFDLNAKPDYPEMLSFVE 478
Query: 307 GFTSQVFPL 315
F L
Sbjct: 479 EMCRNGFYL 487
>gi|419720997|ref|ZP_14248200.1| pectate lyase family protein [Lachnoanaerobaculum saburreum F0468]
gi|383302819|gb|EIC94301.1| pectate lyase family protein [Lachnoanaerobaculum saburreum F0468]
Length = 526
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/282 (34%), Positives = 140/282 (49%), Gaps = 20/282 (7%)
Query: 26 SLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKHT---RGHLVELMNSNNILISNL 82
+LI G + NV I G G +DG M WW K R + V L N NI + L
Sbjct: 183 ALITGISVENVHIYG-EGILDGNASMLD--WWKDAKKKNIAWRPNTVFLHNCKNIAMQGL 239
Query: 83 TFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVA 142
NSP WT+HP Y N++ TI+ P N+PNTDG+DP+S NV I I GDD VA
Sbjct: 240 CIMNSPSWTVHPYYSDNLLFLNNTIMNPDNSPNTDGLDPESCENVLILGADISVGDDCVA 299
Query: 143 VKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAG 202
+KSG + + +P+ NI++R S V IGSE++ G+++V+V++ G
Sbjct: 300 IKSGKYYMALKHYKPAKNIVIRN-SIFRKGHGSVTIGSEVAAGVYDVSVEKCIFEGTDRG 358
Query: 203 VRIKTDKGRG--GYIENITIRNIKMERVKIPIRISRGSNDHPDEGWD----------PKA 250
+RIKT +GRG ++NI NI M+ V +P + PD D +
Sbjct: 359 LRIKTRRGRGEKSVLDNICFENILMKDVCMPFTANMFYFCDPDGHSDYVQNQDKMEVNEK 418
Query: 251 LPKIRGISFVNVVSVNTTKA-PVLAGIIGTQFEEICMKNVSL 291
PKI I+ ++ N L G+ EEI ++N++L
Sbjct: 419 TPKIGKIAARDIRCENVKNIFACLYGLPEMPVEEIVLENITL 460
>gi|255692376|ref|ZP_05416051.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii
DSM 17565]
gi|260621842|gb|EEX44713.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 513
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/313 (32%), Positives = 140/313 (44%), Gaps = 59/313 (18%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRT---LKHTRGHL--------------- 68
LI+ N+ ITG GT+DG G WW W T +K G L
Sbjct: 112 LIYAHDAENLTITG-RGTLDGNGFKWWS-WEKETRELIKKNGGKLPALNKLQRMWEEANE 169
Query: 69 ---------------------VELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTI 107
++ NN+LI N+ NSPFWTI+P +C NV + G+TI
Sbjct: 170 ELEISDYYKPSLERRMFRPPFIQFYECNNVLIENVRIVNSPFWTINPAFCDNVTVHGVTI 229
Query: 108 LAPL---NAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVR 164
P PNTDGI+P S NV I DC+I GDD + +KSG D G + NI +
Sbjct: 230 YNPSKDPKGPNTDGINPSSCRNVRISDCFISVGDDCITIKSGRDADGRKYGKACENITIT 289
Query: 165 R---VSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIR 221
+SG GV IGSEMSGG+ VT+ +G+R+K+ +GRGG +E + +
Sbjct: 290 NCVMLSGH----GGVVIGSEMSGGVRRVTISNCVFDGIDSGIRLKSSRGRGGVVEELRVD 345
Query: 222 NIKMERVKIPIRISRGSNDHPDEGWDP--KALPKIRGISFVNVVSVNTTKAPVLAGI--- 276
NI M+ ++ I D + +P + P R I N+ + + + GI
Sbjct: 346 NIVMKNIQRNAFIFDLFYDK-ESKMEPVSERTPVFRNIHLSNITGSDIKQIGYIKGIEEM 404
Query: 277 --IGTQFEEICMK 287
G F I MK
Sbjct: 405 PVQGLSFSNINMK 417
>gi|423215151|ref|ZP_17201679.1| hypothetical protein HMPREF1074_03211 [Bacteroides xylanisolvens
CL03T12C04]
gi|392692414|gb|EIY85652.1| hypothetical protein HMPREF1074_03211 [Bacteroides xylanisolvens
CL03T12C04]
Length = 513
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/313 (32%), Positives = 140/313 (44%), Gaps = 59/313 (18%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRT---LKHTRGHL--------------- 68
LI+ N+ ITG GT+DG G WW W T +K G L
Sbjct: 112 LIYAHDAENLTITG-RGTLDGNGFKWWS-WEKETRELIKKNGGKLPALNKLQRMWEEANE 169
Query: 69 ---------------------VELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTI 107
++ NN+LI N+ NSPFWTI+P +C NV + G+TI
Sbjct: 170 ELEISDYYKPSLERRMFRPPFIQFYECNNVLIENVKIVNSPFWTINPAFCDNVTVHGVTI 229
Query: 108 LAPL---NAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVR 164
P PNTDGI+P S NV I DC+I GDD + +KSG D G + NI +
Sbjct: 230 YNPSKDPKGPNTDGINPSSCRNVRISDCFISVGDDCITIKSGRDADGRKYGKACENITIT 289
Query: 165 R---VSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIR 221
+SG GV IGSEMSGG+ VT+ +G+R+K+ +GRGG +E + +
Sbjct: 290 NCVMLSGH----GGVVIGSEMSGGVRRVTISNCVFDGTDSGIRLKSSRGRGGVVEELRVD 345
Query: 222 NIKMERVKIPIRISRGSNDHPDEGWDP--KALPKIRGISFVNVVSVNTTKAPVLAGI--- 276
NI M+ ++ I D + +P + P R I N+ + + + GI
Sbjct: 346 NIVMKNIQRNAFIFDLFYDK-ESKVEPVSERTPVFRNIHLSNITGSDIKQIGYIKGIEEM 404
Query: 277 --IGTQFEEICMK 287
G F I MK
Sbjct: 405 PVQGLSFSNINMK 417
>gi|374313032|ref|YP_005059462.1| Polygalacturonase [Granulicella mallensis MP5ACTX8]
gi|358755042|gb|AEU38432.1| Polygalacturonase [Granulicella mallensis MP5ACTX8]
Length = 420
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/270 (33%), Positives = 142/270 (52%), Gaps = 20/270 (7%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWWNRTLK--------HTRGHLVELMNSNNILISNLTFRN 86
N+ ITG GTIDG G +WW+ + +K H R + +S +I + +T +N
Sbjct: 119 NITITG-GGTIDGNGHIWWE--YVHAVKEAGVLGNDHPRPMGLVFDHSKHIRVEGITVQN 175
Query: 87 SPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSG 146
+ FW I P Y ++V + + ILAP ++PNTD IDP SS+N+ I+ + GDD VA+KSG
Sbjct: 176 AGFWQIVPYYADDLVFRNLKILAP-HSPNTDAIDPFSSSNIVIDHVFSSVGDDNVAIKSG 234
Query: 147 WDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIK 206
+ A PS NI + T G+ IGSE++GG+ NV +++H G+RIK
Sbjct: 235 AINSPGPDA-PSKNITITDC--TFENGHGLSIGSEIAGGVQNVHAERIHFKGTDQGIRIK 291
Query: 207 TDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDP-----KALPKIRGISFVN 261
++ RG + NI+ ++I M VK I I+ +G P + P+ I+ N
Sbjct: 292 ANRDRGNDVSNISFKDIDMVDVKTAILITEYYPKAAPDGEVPSMPMGRLTPRFHDIAIEN 351
Query: 262 VVSVNTTKAPVLAGIIGTQFEEICMKNVSL 291
V + + A + G+ + E + +KNV L
Sbjct: 352 VHATGSGSAGTIVGLPESPVEGLSLKNVDL 381
>gi|224537997|ref|ZP_03678536.1| hypothetical protein BACCELL_02886 [Bacteroides cellulosilyticus
DSM 14838]
gi|224520403|gb|EEF89508.1| hypothetical protein BACCELL_02886 [Bacteroides cellulosilyticus
DSM 14838]
Length = 452
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 105/327 (32%), Positives = 156/327 (47%), Gaps = 65/327 (19%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWW--------DL-------------WWNRTLKHT- 64
LI+ N+ I G GT+DGQG+ WW DL W++ T
Sbjct: 116 LIYAVDAENITIKG-EGTLDGQGKKWWMEFFRVMIDLRDNGMRNVNKYQTMWDQANDTTA 174
Query: 65 ------------------RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMT 106
R ++ + ++ I + NSPFWT++P +C NV +KG+T
Sbjct: 175 IYAETNKDYIGTLQRRFFRPPFIQPVRCKDVKIEGVKIVNSPFWTVNPEFCENVKVKGVT 234
Query: 107 ILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRR- 165
I + +PNTDGI+P+S NV I DC+I GDD + +KSG D G + P NI +
Sbjct: 235 I-HNVPSPNTDGINPESCRNVHISDCHISVGDDCITIKSGRDAQGRRLGVPCENITITNC 293
Query: 166 --VSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIE-----NI 218
+SG GV IGSEMSGG+ VT+ G+R+K+ +GRGG +E NI
Sbjct: 294 IMLSGH----GGVVIGSEMSGGVRKVTISNCIFDGTDRGIRLKSTRGRGGVVEDIRVSNI 349
Query: 219 TIRNIKMERVKIPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPV-LAGII 277
+RNIK E V + ++ S G P + P R I ++ ++V K PV + G+
Sbjct: 350 VMRNIKQEAVVLNLKYS-GMPAEPKS----ERTPLFRNIH-ISGMTVTDVKTPVKIVGLE 403
Query: 278 GTQFEEICMKNVSLLGLAPSAKWQCQF 304
EI ++++ + G A +C F
Sbjct: 404 EAPISEIVLRDIHVQG----AGEECVF 426
>gi|372221526|ref|ZP_09499947.1| glycoside hydrolase family protein [Mesoflavibacter
zeaxanthinifaciens S86]
Length = 487
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 157/307 (51%), Gaps = 46/307 (14%)
Query: 26 SLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNR--------------TLKHTRGHLVEL 71
+L++ NV+I+G GTIDGQG+++WD++W+ R V +
Sbjct: 142 ALVNAIDTQNVLISG-EGTIDGQGKVFWDMYWDMRKNDYEPKGLRWIVDYDAKRPRTVLI 200
Query: 72 MNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPL--NAPNTDGIDPDSSTNVCI 129
NS N+++ +LT + + FWT+ +Y ++V G+TI + + P+TDGID DSS+ + +
Sbjct: 201 QNSKNVIVRDLTLQRAGFWTVQILYSKHVTTDGLTIRNNIGGHGPSTDGIDIDSSSYILV 260
Query: 130 EDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVG---IGSEMSGGI 186
++C I+ DD +K+G D G+ + RP+ ++++ T G G +GSE SGGI
Sbjct: 261 QNCDIDCNDDNFCLKAGRDWDGLRVNRPTEYVVIKDC----KTGKGAGLLTVGSETSGGI 316
Query: 187 FNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSN------- 239
++ + + AG+++K+ RGG IE+I N+KM+ V + IS N
Sbjct: 317 RHIYANNIQGKGTDAGLKLKSATTRGGVIEDIIFDNMKMDSVGTFLSISMNWNPTYSYSK 376
Query: 240 -------DHPDEGW--------DPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEI 284
D E W + + +P+ + I NV+ + KA ++G+ + ++
Sbjct: 377 LPKEYNIDEVPEHWKTMLNTVPEQQGIPQFKNIVLNNVLVKHANKAISVSGLEVSTINKV 436
Query: 285 CMKNVSL 291
+K+V +
Sbjct: 437 YLKDVQI 443
>gi|284005877|ref|YP_003391696.1| glycoside hydrolase family 28 [Spirosoma linguale DSM 74]
gi|283821061|gb|ADB42897.1| glycoside hydrolase family 28 [Spirosoma linguale DSM 74]
Length = 390
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/271 (33%), Positives = 145/271 (53%), Gaps = 16/271 (5%)
Query: 26 SLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKHTRGHLVELMNSNNILISNLTFR 85
+LI+GD LT+V +TG GTIDG G +WW + + R L+ L S N+ I LT
Sbjct: 92 NLINGDSLTDVSLTG-TGTIDGNGAVWWQRFIDSGKTLNRPRLIYLTRSRNVTIDGLTLI 150
Query: 86 NSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKS 145
NSP + + P C+NV I+ +TI AP ++PNTDGIDP + T+V I++C I++GDD +A+K
Sbjct: 151 NSPSFHLVPSQCQNVTIQNLTITAPSDSPNTDGIDPANCTHVLIQNCTIDNGDDNIAIKG 210
Query: 146 GWDHYGIAMARPSSNIIVRRVSGTTPTCS-----GVGIGSEMSGGIFNVTVDQLHVWDAA 200
G + I +P +I +R C G+ +GSE S G+ +V+V
Sbjct: 211 GRSNGQI--VQPCQDIQIRN-------CRFLHGHGLSVGSETSSGVSSVSVTNCTFTGTT 261
Query: 201 AGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDPKALPKIRGISFV 260
G+RIK+ G GG I+N++ I M V P+ I + + + G+ +P + G++
Sbjct: 262 NGIRIKSQPGLGGAIQNLSYSQITMTNVTNPLIIDLAYSLNNNNGY-ASDIPSVSGLTID 320
Query: 261 NVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 291
+ A L G+ + + + + N+ +
Sbjct: 321 QLSVTGAKNAGSLVGLTNSLLQNLTLSNLQI 351
>gi|254785604|ref|YP_003073033.1| glycoside hydrolase family 28 domain-containing protein
[Teredinibacter turnerae T7901]
gi|237685733|gb|ACR12997.1| glycoside hydrolase family 28 domain protein [Teredinibacter
turnerae T7901]
Length = 467
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/240 (33%), Positives = 130/240 (54%), Gaps = 14/240 (5%)
Query: 59 RTLKHTRGH-----LVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNA 113
R ++ GH ++ N+L+ ++T N+PFW +HPV C NV + + + +
Sbjct: 204 RQRHYSDGHYLRPPFIQPYQCRNVLLEDVTIINAPFWLVHPVLCDNVTARRLHLQSL--G 261
Query: 114 PNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTC 173
PN+DG +P+S NV IE C+ ++GDD +A+KSG + G + PS NI++R
Sbjct: 262 PNSDGCNPESCRNVLIEHCFFDTGDDCIAIKSGRNADGRRLNIPSENIVIRHCE-MRAGH 320
Query: 174 SGVGIGSEMSGGIFNVTV--DQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIP 231
GV IGSE+SGG+ NV +++ D G RIKT+ RGG IENI +R+I++ +VK
Sbjct: 321 GGVVIGSEISGGVRNVYAHDNRMSSPDLERGFRIKTNSVRGGLIENIYLRDIQIGQVKDA 380
Query: 232 IRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 291
I I N H +EG K P +R I+ N+ + + + G +++ + N +
Sbjct: 381 IVI----NFHYEEGDAGKFDPTVRNINLDNISCEHAQQVFQIRGFDRAPIKQLSITNSTF 436
>gi|146301983|ref|YP_001196574.1| glycoside hydrolase [Flavobacterium johnsoniae UW101]
gi|146156401|gb|ABQ07255.1| Candidate polygalacturonase; Glycoside hydrolase family 28
[Flavobacterium johnsoniae UW101]
Length = 448
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 95/292 (32%), Positives = 153/292 (52%), Gaps = 42/292 (14%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLW---------WNRTLKHT------------- 64
LI+ TN+ ITG G IDG+G W + +R + H
Sbjct: 132 LIYAVDCTNIAITGV-GIIDGEGGKIWKSFKAKEGAGKNLSREMNHNNVPVSDRKFGEGY 190
Query: 65 --RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
R +++ +N NIL+ N+ NSPFW +H + +N+ ++G++ LN N DGIDP+
Sbjct: 191 FLRPQMIQFLNCKNILVENVRIENSPFWCLHLLKSQNITVRGIS-YKSLNY-NNDGIDPE 248
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIA-MARPSSNIIVRRVSGTTPTCSGVGIGSE 181
+ +V IE+ ++GDD VA+K+G DH G A A PS NI++R + GV IGSE
Sbjct: 249 YAKDVLIENVTFDNGDDNVAIKAGRDHEGRANTASPSENIVIRNCN--FKGLHGVVIGSE 306
Query: 182 MSGGIFNVTVDQLHVWD-AAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSND 240
MS G+ NV V+ G+ +KT+ RGGYI+N+ ++N++++ V+ + I+ +N
Sbjct: 307 MSAGVQNVFVENCKTAGYLKRGIYLKTNADRGGYIKNVFVQNLQLDEVEDCLYIT--ANY 364
Query: 241 HPD-EGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 291
H + EG+ I I F N+ T +GI+ F + ++++SL
Sbjct: 365 HGEGEGYQ----SDISNIHFSNI----TCNRASESGIVIQGFSDKKIRSISL 408
>gi|224540752|ref|ZP_03681291.1| hypothetical protein BACCELL_05666 [Bacteroides cellulosilyticus
DSM 14838]
gi|423224671|ref|ZP_17211139.1| hypothetical protein HMPREF1062_03325 [Bacteroides cellulosilyticus
CL02T12C19]
gi|224517619|gb|EEF86724.1| hypothetical protein BACCELL_05666 [Bacteroides cellulosilyticus
DSM 14838]
gi|392635111|gb|EIY29017.1| hypothetical protein HMPREF1062_03325 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 467
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 142/292 (48%), Gaps = 50/292 (17%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQG--QMWWDLW------WNRTLKHTRG------------ 66
LI+ TN+ ITG GTIDGQG + WW + W + R
Sbjct: 139 LIYAYGETNIAITG-KGTIDGQGSNETWWPMCGAPRYGWKEGMVAQRNGGRERLLMYGET 197
Query: 67 -----------------HLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILA 109
L+ L + N +LI ++T NSPFW IHP++C ++ ++G+ +
Sbjct: 198 STPIYKRVMTPEDGLRPQLINLYSCNTVLIEDVTLLNSPFWVIHPLFCESLTVRGVYVYN 257
Query: 110 PLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGT 169
PN DG DP+S NV IE+C ++GDD +A+KSG + G PS NIIVR
Sbjct: 258 --RGPNGDGCDPESCKNVLIENCTFDTGDDCIAIKSGRNQDGRKWGVPSENIIVRGCY-M 314
Query: 170 TPTCSGVGIGSEMSGGIFNVTVD--QLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMER 227
GV IGSE+SGG N+ V+ ++ D +RIKT RGG IEN+ +RN+ + +
Sbjct: 315 KKGHGGVVIGSEISGGYRNLYVENCKMDSPDLDRVIRIKTSTCRGGLIENVFVRNVTVGQ 374
Query: 228 VK---IPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGI 276
+ + I + + ++ + G+ P +R + NV + ++ G+
Sbjct: 375 CREAVLRINLQYENRENCNRGF----TPTVRNVHLKNVTCEKSKLGVLIIGL 422
>gi|261879637|ref|ZP_06006064.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
gi|270333653|gb|EFA44439.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
Length = 496
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 127/257 (49%), Gaps = 20/257 (7%)
Query: 54 DLWWNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNA 113
D WN + R +V L+N N+L+ ++ F+NSP W IHP+ C NV+I G+ P A
Sbjct: 219 DEEWNAIKRFLRPVMVSLVNCKNVLLKDVIFQNSPAWNIHPLMCENVIIDGVLARNPSYA 278
Query: 114 PNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTC 173
N D +D +S NV + + ++GDD + +KSG D G RP N++ V G T
Sbjct: 279 QNGDALDLESCKNVLVVNSKFDAGDDGICIKSGKDESGRKRGRPCENVV---VDGCTVFA 335
Query: 174 --SGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVK-- 229
G +GSEMSGG+ N+ V + G+R K+ +GRGG +ENI I +I M +K
Sbjct: 336 GHGGFVVGSEMSGGVRNILVKRCQFLGTDVGLRFKSKRGRGGIVENIFIHDISMTDIKTD 395
Query: 230 -IPIRISRGSNDHPD---EGWDPKALPKI---------RGISFVNVVSVNTTKAPVLAGI 276
I + G + +G +P + K+ R I N+V +A G+
Sbjct: 396 AITFNMYYGGKSVAEMLADGDNPDNVSKMPVTGETPIFRHIDIRNIVCYGAGRAMEFNGL 455
Query: 277 IGTQFEEICMKNVSLLG 293
E I ++NV ++
Sbjct: 456 PEMPIENINLENVHIIA 472
>gi|116623151|ref|YP_825307.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116226313|gb|ABJ85022.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 436
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 99/345 (28%), Positives = 165/345 (47%), Gaps = 52/345 (15%)
Query: 7 IDPLPSYGRGRERLGGRHI----SLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
+ L +Y + R+ G + +L++ +NV ++G GT+DG G++WWDL+W +
Sbjct: 83 VQDLAAYPLMQTRVAGIEMKWPAALLNVYEQSNVRLSG-KGTVDGDGKIWWDLYWKMRRE 141
Query: 63 H--------------TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTIL 108
R L+++ S + + +LT + FWT+H Y V + G+TI
Sbjct: 142 EYEPKGLRWAVDYDCRRPRLIQIYKSQGVDLVSLTLKRPGFWTVHICYSERVTVDGLTIR 201
Query: 109 APLNA--PNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRV 166
+ P+TDGID DSS++V + C I+ DD + +K+G D G+ + P+ + R+
Sbjct: 202 NNTDGKGPSTDGIDIDSSSDVLVAHCDIDCNDDAICLKAGRDADGLRVNLPTERV---RI 258
Query: 167 SGTTPT--CSGVGIGSEMSGGIFNVTVDQLHVWDAA-AGVRIKTDKGRGGYIENITIRNI 223
+ +GV IGSE SGGI ++ VD L V A AG+ K+ RGG IE+I IRN+
Sbjct: 259 TDNVVRGGAAGVTIGSETSGGIRHIEVDHLTVMSAVPAGILFKSASTRGGTIEDIAIRNV 318
Query: 224 KMERVKIPIRIS-------------RGSNDHPD------EGWDP-KALPKIRGISFVNVV 263
V P+ I+ G D PD E P K +P R + V
Sbjct: 319 ITVGVATPVSITLNWNPAYSYAKLPEGVKDMPDYWRVLTEVVPPGKGIPHFRDVRISRVK 378
Query: 264 SVNTTKAPVLAG-----IIGTQFEEICMKNVSLLGLAPSAKWQCQ 303
S +A ++ ++ QF++I ++ + +A + W+ +
Sbjct: 379 STGAQRAFAVSSYAESPLVDFQFKDIDIEAKTAGSIANTQGWKFE 423
>gi|300725841|ref|ZP_07059307.1| exo-poly-alpha-D-galacturonosidase [Prevotella bryantii B14]
gi|299776888|gb|EFI73432.1| exo-poly-alpha-D-galacturonosidase [Prevotella bryantii B14]
Length = 447
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 143/307 (46%), Gaps = 33/307 (10%)
Query: 23 RHISLIHGDHLTNVIITGYNGTIDGQGQMW------------W--------------DLW 56
R I+ I G HL N+ ITG+ G DG G+ W W D+W
Sbjct: 111 RCIAPISGTHLQNIAITGH-GVFDGSGERWRPVKRSKLTSAQWKNFTSRPGSVNKKGDVW 169
Query: 57 W-NRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPN 115
+ + R L+ + N+ + +TF+NSP W +HP+ C NV I + + P A N
Sbjct: 170 EPDSNAANIRPVLLNFTSCKNVKLEGVTFKNSPAWCVHPLLCENVTIDNIKVNNPWYAQN 229
Query: 116 TDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSG 175
D +D +S NV I + ++GDD + +KSG + G P N+ ++ + G
Sbjct: 230 GDALDVESCKNVVIINSLFDAGDDAICIKSGKNEAGRRRGVPCENVYIKN-NTVLHGHGG 288
Query: 176 VGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERV---KIPI 232
IGSEMSGG+ N+ + G+R K+ +GRGG +ENI I I M+ + I +
Sbjct: 289 FVIGSEMSGGVKNIYISDCTFIGTDVGLRFKSARGRGGVVENIYIDRINMKNIVNEAITM 348
Query: 233 RISRGSNDHPDEGWD-PKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 291
+ SN P E D + P R I N++ K+ L G+ E I ++N+ +
Sbjct: 349 NLYYSSNGKPAERTDVNEGTPVFRNIEMKNLLVEGAGKSFYLYGLPEMPLENISIQNMRV 408
Query: 292 LGLAPSA 298
+A ++
Sbjct: 409 SKIAETS 415
>gi|333897861|ref|YP_004471735.1| polygalacturonase [Thermoanaerobacterium xylanolyticum LX-11]
gi|333113126|gb|AEF18063.1| Polygalacturonase [Thermoanaerobacterium xylanolyticum LX-11]
Length = 518
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 103/309 (33%), Positives = 147/309 (47%), Gaps = 23/309 (7%)
Query: 26 SLIHGDHLTNVIITGYNGTIDGQGQMWWDLWW-NRTLKHT--RGHLVELMNSNNILISNL 82
SLI G + NV I G +G IDG +D WW + +K R V L N+LI +
Sbjct: 183 SLITGISVENVNIIG-DGIIDGNSS--FDTWWQDAKVKRIAWRPRTVYLNKCKNVLIEGI 239
Query: 83 TFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVA 142
T +NSP WTIHP+ +N+ + I P +APNTDG+DP+S +V I GDD +A
Sbjct: 240 TIKNSPSWTIHPLMSQNLKFVNLNIENPKDAPNTDGLDPESCKDVLIVGTRFSVGDDCIA 299
Query: 143 VKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAG 202
+KSG + PS N+I+R V IGSEMSGG+ NV V+ G
Sbjct: 300 IKSGKLSVSQKLPMPSENLIIRNCL-MEYGHGAVVIGSEMSGGVKNVHVENCIFRKTDRG 358
Query: 203 VRIKTDKGRG--GYIENITIRNIKMERVKIPIRISR----GSNDHPDEGWDPKAL----- 251
+RIKT +GRG G I+ I NI+ME V P I+ ++ + W + L
Sbjct: 359 IRIKTRRGRGKTGVIDEIHASNIRMEGVLTPFTINSFYFCDADGKTEYVWSKEKLPVDDR 418
Query: 252 -PKIRGISFVNVVSVNT-TKAPVLAGIIGTQFEEICMKNVSL---LGLAPSAKWQCQFVS 306
P + I ++ ++T A + G+ + E + M+N+ + L P FV
Sbjct: 419 TPYVGNIYLKDITCIDTQVAAGYMYGLPERKIERVDMENIYVSFDLNAKPDYPEMLSFVE 478
Query: 307 GFTSQVFPL 315
F L
Sbjct: 479 EMCRNGFYL 487
>gi|427386399|ref|ZP_18882596.1| hypothetical protein HMPREF9447_03629 [Bacteroides oleiciplenus YIT
12058]
gi|425726439|gb|EKU89304.1| hypothetical protein HMPREF9447_03629 [Bacteroides oleiciplenus YIT
12058]
Length = 467
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 94/294 (31%), Positives = 143/294 (48%), Gaps = 54/294 (18%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLWW----------------------NRTLKH- 63
LI+ TN+ ITG GTIDGQG D WW R L +
Sbjct: 139 LIYAYGETNIAITG-KGTIDGQGSN--DTWWPMCGAPRYGWKEGMVAQRNGGRERLLMYG 195
Query: 64 ----------------TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTI 107
R L+ L + N +LI ++T NSPFW IHP++C +++++G+ +
Sbjct: 196 ETSTPVYKRVMTPEDGLRPQLINLYSCNTVLIEDVTLLNSPFWVIHPLFCESLIVRGVYV 255
Query: 108 LAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVS 167
PN DG DP+S NV IE+C ++GDD +A+KSG + G PS NIIVR
Sbjct: 256 YN--RGPNGDGCDPESCKNVLIENCTFDTGDDCIAIKSGRNQDGRKWGIPSENIIVRGCY 313
Query: 168 GTTPTCSGVGIGSEMSGGIFNVTVD--QLHVWDAAAGVRIKTDKGRGGYIENITIRNIKM 225
GV IGSE+SGG N+ V+ ++ D +RIKT RGG IEN+ +RN+ +
Sbjct: 314 -MKKGHGGVVIGSEISGGYRNLYVENCKMDSPDLDRVIRIKTSTCRGGLIENVFVRNVTV 372
Query: 226 ERVK---IPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGI 276
+ + + I + + ++ + G+ P +R + NV + ++ G+
Sbjct: 373 GQCREAVLRINLQYENRENCNRGF----TPTVRNVHLKNVTCEKSKLGVLIIGL 422
>gi|373469919|ref|ZP_09561077.1| polygalacturonase [Lachnospiraceae bacterium oral taxon 082 str.
F0431]
gi|371763536|gb|EHO52007.1| polygalacturonase [Lachnospiraceae bacterium oral taxon 082 str.
F0431]
Length = 526
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 97/282 (34%), Positives = 139/282 (49%), Gaps = 20/282 (7%)
Query: 26 SLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKHT---RGHLVELMNSNNILISNL 82
+LI G + NV+I G G +DG M WW K R + V L N NI + L
Sbjct: 183 ALITGISVENVLIFG-EGILDGNAGMLD--WWKDAKKKNIAWRPNTVFLYNCKNIAMQGL 239
Query: 83 TFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVA 142
NSP WT+HP Y N++ TI+ P N+PNTDG+DP+S NV I I GDD VA
Sbjct: 240 CIMNSPSWTLHPYYSDNLLFLNNTIMNPDNSPNTDGLDPESCENVLILGADISVGDDCVA 299
Query: 143 VKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAG 202
+KSG + + +P+ NI++R S V IGSE++ G+++V V + G
Sbjct: 300 IKSGKYYMALKHYKPAKNIVIRN-SIFRKGHGSVTIGSEVAAGVYDVRVGKCIFEGTDRG 358
Query: 203 VRIKTDKGRG--GYIENITIRNIKMERVKIPIRISRGSNDHPDEGWD----------PKA 250
+RIKT +GRG ++NI NI M+ V +P + PD D +
Sbjct: 359 LRIKTRRGRGEKSVLDNICFENILMKDVCMPFTANMFYFCDPDGHSDYVQNQDKMEVNEK 418
Query: 251 LPKIRGISFVNVVSVNTTKA-PVLAGIIGTQFEEICMKNVSL 291
PKI I+ ++ N L G+ EEI ++N++L
Sbjct: 419 TPKIGKIAARDIRCENVKNIFACLYGLPEMPVEEIVLENITL 460
>gi|189462646|ref|ZP_03011431.1| hypothetical protein BACCOP_03343 [Bacteroides coprocola DSM 17136]
gi|189430807|gb|EDU99791.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 482
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 98/308 (31%), Positives = 146/308 (47%), Gaps = 56/308 (18%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQG--QMWWDLW---------------------------- 56
LI+ +N+ ITG GTIDGQG + WW +
Sbjct: 154 LIYAYGESNIAITG-KGTIDGQGSNETWWPMCGAAHYGWKEGMHSQKLGSRERLMGYAEL 212
Query: 57 ----WNRTL---KHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILA 109
+ R + R L+ N ILI ++T NSPFW IHP+ C +++++G+ I
Sbjct: 213 KRPIYERAMTPEDALRPQLINFYLCNTILIEDVTLLNSPFWVIHPLLCESLIVRGVKIYN 272
Query: 110 PLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGT 169
PN DG DP+S NV IE+C ++GDD +A+KSG + G RPS NIIVR
Sbjct: 273 --RGPNGDGCDPESCKNVLIENCRFDTGDDCIAIKSGRNEDGRKWNRPSENIIVRNCEMK 330
Query: 170 TPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAA---GVRIKTDKGRGGYIENITIRNIKM- 225
GV IGSE+SGG N+ V+ V D+ +RIKT+ RGG +EN+ +RNIK+
Sbjct: 331 NGH-GGVVIGSEISGGYRNLYVENC-VMDSPQLDRVIRIKTNDCRGGIVENVFVRNIKVG 388
Query: 226 --ERVKIPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEE 283
+ I + S ++ + + P +R + N+ N+ G+
Sbjct: 389 QCHEAVLKINLLYESKENCNRAFP----PIVRNVHLKNITCENSQYGIYAVGLPNKD--- 441
Query: 284 ICMKNVSL 291
C+ N+S+
Sbjct: 442 -CVYNISV 448
>gi|189466414|ref|ZP_03015199.1| hypothetical protein BACINT_02789 [Bacteroides intestinalis DSM
17393]
gi|189434678|gb|EDV03663.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 467
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 142/292 (48%), Gaps = 50/292 (17%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQG--QMWWDLW------WNRTLKHTRG------------ 66
LI+ TN+ ITG GTIDGQG + WW + W + R
Sbjct: 139 LIYAYGETNIAITG-KGTIDGQGSNETWWPMCGAPRYGWKEGMVAQRNGGRERLLMYGET 197
Query: 67 -----------------HLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILA 109
L+ L + N +LI ++T NSPFW IHP++C ++ ++G+ +
Sbjct: 198 STPIYKRVMTPEDGLRPQLINLYSCNTVLIEDVTLLNSPFWVIHPLFCESLTVRGVYVYN 257
Query: 110 PLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGT 169
PN DG DP+S NV IE+C ++GDD +A+KSG + G PS NIIVR
Sbjct: 258 --RGPNGDGCDPESCKNVLIENCTFDTGDDCIAIKSGRNQDGRKWGIPSENIIVRGCY-M 314
Query: 170 TPTCSGVGIGSEMSGGIFNVTVD--QLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMER 227
GV IGSE+SGG N+ V+ ++ D +RIKT RGG IEN+ +RN+ + +
Sbjct: 315 KKGHGGVVIGSEISGGYRNLYVENCKMDSPDLDRVIRIKTSTCRGGLIENVFVRNVTVGQ 374
Query: 228 VK---IPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGI 276
+ + I + + ++ + G+ P +R + NV + ++ G+
Sbjct: 375 CREAVLRINLQYENRENCNRGF----TPTVRNVHLKNVTCEKSKLGVLIIGL 422
>gi|393787524|ref|ZP_10375656.1| hypothetical protein HMPREF1068_01936 [Bacteroides nordii
CL02T12C05]
gi|392658759|gb|EIY52389.1| hypothetical protein HMPREF1068_01936 [Bacteroides nordii
CL02T12C05]
Length = 467
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 142/296 (47%), Gaps = 50/296 (16%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQG--QMWWDLW------WNRTLKHTRG------------ 66
LI+ TN+ ITG GTIDGQG + WW + W + R
Sbjct: 139 LIYAYGETNIAITG-KGTIDGQGSNETWWPMCGAPKYGWKEGMVAQRNGGRERLLMYGET 197
Query: 67 -----------------HLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILA 109
L+ L + +LI ++T NSPFW IHP++C +++++G+ I
Sbjct: 198 STPVYKRIMTPEDGLRPQLINLYACSTVLIEDVTLLNSPFWVIHPLFCESLIVRGVNIFN 257
Query: 110 PLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGT 169
PN DG DP+S NV IE+C ++GDD +A+KSG + G PS NIIVR
Sbjct: 258 --RGPNGDGCDPESCKNVLIENCTFDTGDDCIAIKSGRNADGRKWNIPSENIIVRNCKMK 315
Query: 170 TPTCSGVGIGSEMSGGIFNVTVD--QLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMER 227
GV IGSE+SGG N+ V+ Q+ + +RIKT RGG IEN+ +RNI + +
Sbjct: 316 NGH-GGVVIGSEISGGYRNLFVENCQMDSPNLDRVIRIKTSTCRGGIIENVFVRNITVGQ 374
Query: 228 VK---IPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQ 280
+ + I + + + + G+ P +R + NV + ++ G+ Q
Sbjct: 375 CREAVLRINLQYENREQCNRGF----TPTVRNVHLKNVTCQKSRLGVLIIGLDDDQ 426
>gi|399032135|ref|ZP_10731774.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398069546|gb|EJL60896.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 449
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 100/311 (32%), Positives = 158/311 (50%), Gaps = 42/311 (13%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLW---------WNRTLKHT------------- 64
LI+ TN+ I+G GTIDG+G W + +R + H
Sbjct: 135 LIYAYDCTNIAISG-EGTIDGEGGKTWKSFKDKEGKGKELSREMNHNSIPINERKFGTGY 193
Query: 65 --RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
R +++ NIL+ N+ NSPFW +H + ++ ++G++ LN N DGIDP+
Sbjct: 194 FLRPQMIQFFKCKNILVENIRIENSPFWCLHLLKSESITVRGIS-YKSLNY-NNDGIDPE 251
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIA-MARPSSNIIVRRVSGTTPTCSGVGIGSE 181
+ +V IE+ +GDD +A+K+G DH G A A PS NII+R + GV IGSE
Sbjct: 252 YAKDVLIENVTFNNGDDNIAIKAGRDHEGRANSATPSENIIIRNCN--FKGLHGVVIGSE 309
Query: 182 MSGGIFNVTVDQLH-VWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSND 240
MS G+ NV V+ V G+ +KT+ RGG+I+N+ +RNI+++ V+ + I+ +N
Sbjct: 310 MSAGVQNVYVENCKTVGYLKRGIYLKTNADRGGFIKNVFVRNIQLDEVEDCLYIT--ANY 367
Query: 241 HPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKW 300
H G +I +SF + +S N A GI+ F + +KN+SL + KW
Sbjct: 368 H---GEGKGFQSEISNVSFSD-ISCNKASA---TGIVIQGFPDKKIKNISLNNI--EIKW 418
Query: 301 QCQFVSGFTSQ 311
+S ++
Sbjct: 419 AKNAISSTNAE 429
>gi|224536550|ref|ZP_03677089.1| hypothetical protein BACCELL_01425 [Bacteroides cellulosilyticus
DSM 14838]
gi|224521806|gb|EEF90911.1| hypothetical protein BACCELL_01425 [Bacteroides cellulosilyticus
DSM 14838]
Length = 462
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 153/299 (51%), Gaps = 39/299 (13%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLWWN---------RTLKHT------------- 64
LI+ H+ N+ +TG GT++G G + W N R + T
Sbjct: 138 LIYAYHVQNIALTG-EGTVNGNGSKKFSPWNNIQTVEQEMLRKMGRTNVPVYRRIFGEGY 196
Query: 65 --RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
R +E N+ I +T +SPFW IHP++C NV+++ +T+ + + N DG DP+
Sbjct: 197 KLRPGFIEPFGCANVRIEGVTIMDSPFWVIHPIFCNNVIVRNVTVDS--HNYNNDGCDPE 254
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S NV IE C +GDD +A+KSG D+ + +P+ N+++R S + +GV IGSE+
Sbjct: 255 SCRNVLIEGCTFSTGDDAIAIKSGRDNDAWRIGQPTENVVIRNCSFRSKI-NGVCIGSEI 313
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIP-IRISRGSNDH 241
+GG+ N+ ++ + + ++ + K++ RG YI+++ +RN++ + V+ IR
Sbjct: 314 AGGVRNIFIENITIPKSSNAIYFKSNLDRGAYIQDVYVRNVQADTVRTALIRF------E 367
Query: 242 PDEGWDPKALPKIRGISFV--NVVSVNTTKAPV-LAGIIGTQFEEICMKNVSLLGLAPS 297
P+ + A SF+ NV + + + +AG + I +KNV+ +G P+
Sbjct: 368 PNYKGERSAFHPTLFDSFLIENVTCKQSNECGIYMAGFAERPLQNIVLKNVT-IGKVPT 425
>gi|373955264|ref|ZP_09615224.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
gi|373891864|gb|EHQ27761.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
Length = 549
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 154/359 (42%), Gaps = 79/359 (22%)
Query: 1 MDEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMW-------- 52
+++PI++ G GR S I G L N+ ITG G IDG G W
Sbjct: 108 FNQYPIVE-----GSYEGLPAGRCKSPISGKDLQNIAITG-TGIIDGNGDAWRMVKKDKL 161
Query: 53 ----WD--------------LWW--NRTLKHT------------------------RGHL 68
W W+ ++LK + R ++
Sbjct: 162 TATQWQDKIASGGLLSADKKTWYPTEKSLKGSQAKDPGILKEGRSIQDFEVYKDFLRPNM 221
Query: 69 VELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVC 128
V L N IL+ +TF+NSP W +HP C ++ ++G+ + P A N DGID +SSTN
Sbjct: 222 VVLNNCKRILLEGVTFQNSPAWNLHPFLCSDLTLRGVNVKNPWYAQNGDGIDLESSTNTL 281
Query: 129 IEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFN 188
IE+ + GDD + +KSG D G + +P+ N+IVR G IGSEMSGG N
Sbjct: 282 IENSTFDVGDDGICIKSGRDEAGRKLGKPTENVIVRNCV-VYHAHGGFVIGSEMSGGAKN 340
Query: 189 VTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERV-------------KIPIRIS 235
+ V G+R KT +GRGG ++NI + NI M+ + K P+ +S
Sbjct: 341 IFVYNCSFLGTDVGLRFKTTRGRGGVVQNIYVTNINMKDIGAEAILFDMYYMAKDPVALS 400
Query: 236 RGSNDHPDEGWDP--KALPKIRGISFVNVVSVNTTKAPVLAG-----IIGTQFEEICMK 287
D P P +A P+ + N+V A + G I+G ++ +K
Sbjct: 401 GEKRDAPKVEVLPVTEATPQFKDFHISNIVCNGAATALFIRGLPEMNILGLYLNDMVIK 459
>gi|366053529|ref|ZP_09451251.1| polygalacturonase [Lactobacillus suebicus KCTC 3549]
Length = 439
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 93/307 (30%), Positives = 142/307 (46%), Gaps = 47/307 (15%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLWWN-----RTL-------------------- 61
L++ + N++I G G +DG G WWD + N RTL
Sbjct: 88 LMYANGKENIVIRG-KGVVDGSGSSWWDKFRNIEQEDRTLPREKYELDLAKLNPDYKTRT 146
Query: 62 --------KHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNA 113
+ R L++ ++I +S+ T NSPFWT+H VY + I MT P A
Sbjct: 147 GGGGRPSTQFLRPPLIQFWKCHDIKLSDFTLENSPFWTLHMVYSNKISIDNMTFSNPAEA 206
Query: 114 PNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTC 173
NTD +D DSS +V +++C ++ GDD V +KSG GI + +P+ N+ V +
Sbjct: 207 INTDAMDIDSSEDVTVKNCLLDVGDDGVTLKSGSGEDGIRVNKPTKNVKVSDCR-ILASH 265
Query: 174 SGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIR 233
G+ IGSE + GI +V V G+R+K+ + RGG IENI + +KM+ PI
Sbjct: 266 GGIAIGSETAAGISDVEVSNCTFDGTRRGIRLKSRRTRGGTIENINLSGLKMDLCWCPIS 325
Query: 234 ISR---------GSNDHPDEGWDP--KALPKIRGISFVNVVSVNT-TKAPVLAGIIGTQF 281
+ + DEG P + P IR IS N+ + N A + G+
Sbjct: 326 LEQYFAPGVLPEEEATVLDEGPQPVDETTPHIRNISIKNIKATNVRATAAFIVGLPEANI 385
Query: 282 EEICMKN 288
E + ++N
Sbjct: 386 ENVEIEN 392
>gi|336415217|ref|ZP_08595558.1| hypothetical protein HMPREF1017_02666 [Bacteroides ovatus
3_8_47FAA]
gi|335941250|gb|EGN03108.1| hypothetical protein HMPREF1017_02666 [Bacteroides ovatus
3_8_47FAA]
Length = 513
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 100/313 (31%), Positives = 140/313 (44%), Gaps = 59/313 (18%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRT---LKHTRGHL--------------- 68
LI+ N+ ITG GT++G G WW W T +K G L
Sbjct: 112 LIYAHDAENLTITG-RGTLNGNGFKWWS-WEKETRELIKKNGGKLPALNKLQRMWEEANE 169
Query: 69 ---------------------VELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTI 107
++ NN+LI N+ NSPFWTI+P +C NV + G+TI
Sbjct: 170 DLEISDYYKPSLERRMFRPPFIQFYECNNVLIENVKIVNSPFWTINPAFCDNVTVHGVTI 229
Query: 108 LAPL---NAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVR 164
P PNTDGI+P S NV I DC+I GDD + +KSG D G + NI +
Sbjct: 230 YNPSKDPKGPNTDGINPSSCRNVRISDCFISVGDDCITIKSGRDADGRKYGKACENITIT 289
Query: 165 R---VSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIR 221
+SG GV IGSEMSGG+ VT+ +G+R+K+ +GRGG +E + +
Sbjct: 290 NCVMLSGH----GGVVIGSEMSGGVRRVTISNCVFDGTDSGIRLKSSRGRGGVVEELRVD 345
Query: 222 NIKMERVKIPIRISRGSNDHPDEGWDP--KALPKIRGISFVNVVSVNTTKAPVLAGI--- 276
NI M+ ++ I D + +P + P R I N+ + + + GI
Sbjct: 346 NIVMKNIQRNAFIFDLFYDK-ESKVEPVSERTPVFRNIHLSNITGSDIKQIGYIKGIEEM 404
Query: 277 --IGTQFEEICMK 287
G F I MK
Sbjct: 405 PVQGLSFSNINMK 417
>gi|160885582|ref|ZP_02066585.1| hypothetical protein BACOVA_03584 [Bacteroides ovatus ATCC 8483]
gi|299147452|ref|ZP_07040517.1| polygalacturonase (Pectinase) [Bacteroides sp. 3_1_23]
gi|423290253|ref|ZP_17269102.1| hypothetical protein HMPREF1069_04145 [Bacteroides ovatus
CL02T12C04]
gi|423294451|ref|ZP_17272578.1| hypothetical protein HMPREF1070_01243 [Bacteroides ovatus
CL03T12C18]
gi|156109204|gb|EDO10949.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|298514730|gb|EFI38614.1| polygalacturonase (Pectinase) [Bacteroides sp. 3_1_23]
gi|392665640|gb|EIY59163.1| hypothetical protein HMPREF1069_04145 [Bacteroides ovatus
CL02T12C04]
gi|392675642|gb|EIY69083.1| hypothetical protein HMPREF1070_01243 [Bacteroides ovatus
CL03T12C18]
Length = 513
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 100/313 (31%), Positives = 140/313 (44%), Gaps = 59/313 (18%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRT---LKHTRGHL--------------- 68
LI+ N+ ITG GT++G G WW W T +K G L
Sbjct: 112 LIYAHDAENLTITG-RGTLNGNGFKWWS-WEKETRELIKKNGGKLPALNKLQRMWEEANE 169
Query: 69 ---------------------VELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTI 107
++ NN+LI N+ NSPFWTI+P +C NV + G+TI
Sbjct: 170 DLEISDYYKPSLERRMFRPPFIQFYECNNVLIENVKIVNSPFWTINPAFCDNVTVHGVTI 229
Query: 108 LAPL---NAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVR 164
P PNTDGI+P S NV I DC+I GDD + +KSG D G + NI +
Sbjct: 230 YNPSKDPKGPNTDGINPSSCRNVRISDCFISVGDDCITIKSGRDADGRKYGKACENITIT 289
Query: 165 R---VSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIR 221
+SG GV IGSEMSGG+ VT+ +G+R+K+ +GRGG +E + +
Sbjct: 290 NCVMLSGH----GGVVIGSEMSGGVRRVTISNCVFDGTDSGIRLKSSRGRGGVVEELRVD 345
Query: 222 NIKMERVKIPIRISRGSNDHPDEGWDP--KALPKIRGISFVNVVSVNTTKAPVLAGI--- 276
NI M+ ++ I D + +P + P R I N+ + + + GI
Sbjct: 346 NIVMKNIQRNAFIFDLFYDK-ESKVEPVSERTPVFRNIHLSNITGSDIKQIGYIKGIEEM 404
Query: 277 --IGTQFEEICMK 287
G F I MK
Sbjct: 405 PVQGLSFSNINMK 417
>gi|395803712|ref|ZP_10482956.1| glycoside hydrolase [Flavobacterium sp. F52]
gi|395434266|gb|EJG00216.1| glycoside hydrolase [Flavobacterium sp. F52]
Length = 492
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/308 (32%), Positives = 153/308 (49%), Gaps = 50/308 (16%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQM--WW------DLWWNRTL----------------- 61
LI+ + TN+ ITG GT++GQ WW + W + +
Sbjct: 160 LIYAKNKTNIAITG-KGTLNGQADSTNWWIWSGGKNYGWKKGIPSQNDPTNREVLVDMAE 218
Query: 62 -------------KHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTIL 108
++ R + +E N L+ ++ NSPFW +HP+ N++I G+T+
Sbjct: 219 KGIPVSERVFGDGRYLRPNFIEFFECNTALVKDIKIINSPFWILHPIKTNNMIIDGVTVN 278
Query: 109 APLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSG 168
+ + PN DG DP+ S N+ I +C +GDD +A+K+G D G +A PS NIIV+
Sbjct: 279 S--HGPNNDGCDPEYSQNILIRNCTFNTGDDCIAIKAGRDGDGRRVAIPSKNIIVQNCK- 335
Query: 169 TTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAA---AGVRIKTDKGRGGYIENITIRNIKM 225
GV IGSE+S G+ NV V+ V D+ +RIKT+ RGG IENI +RN+++
Sbjct: 336 MIDGHGGVVIGSEISAGVNNVFVENC-VMDSPNLDRAIRIKTNSRRGGIIENIYVRNLEV 394
Query: 226 ERVK-IPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLA-GIIGTQFEE 283
VK ++++ N + + + +P IR +S NV N K V A G + E
Sbjct: 395 GTVKECVLKLNMFYNVYGSQTGN--FIPTIRNVSLENVTVKNGGKYSVWAEGYAESPVEN 452
Query: 284 ICMKNVSL 291
I +KNV +
Sbjct: 453 ITLKNVKI 460
>gi|389574386|ref|ZP_10164450.1| glycoside hydrolase [Bacillus sp. M 2-6]
gi|388425994|gb|EIL83815.1| glycoside hydrolase [Bacillus sp. M 2-6]
Length = 463
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/237 (35%), Positives = 127/237 (53%), Gaps = 39/237 (16%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQG--QMWW----------------DLWWNRTLK------ 62
LI+ H N+ ITG GT+DG+G WW L + K
Sbjct: 144 LIYAHHAENIAITG-AGTLDGRGDEHHWWPWKYGTNGQPSQDRDRQLLFEMAEKRIPVEE 202
Query: 63 -------HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPN 115
+ R ++ N NILI +T ++SP W +HPV NV+++G+ I+ + PN
Sbjct: 203 RVFGEGHYLRSSFIQPYNCQNILIEGVTVKDSPMWQVHPVLSENVIVRGVNIIG--HGPN 260
Query: 116 TDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSG 175
TDG++P+S +V IEDCY ++GDD +A+KSG + G + PS NI++RR + G
Sbjct: 261 TDGVNPESCRHVLIEDCYFDNGDDCIAIKSGRNEDGRRIGVPSENIVIRR-NTMRDGHGG 319
Query: 176 VGIGSEMSGGIFNVTVDQLHVWDAA---AGVRIKTDKGRGGYIENITIRNIKMERVK 229
V IGSE+SGG+ V + +V D+ +RIKT+ RGG IE+I +N ++ +K
Sbjct: 320 VTIGSEISGGVKYVYAED-NVMDSPNLDRALRIKTNSVRGGTIEHIYFKNNLVKSLK 375
>gi|393781526|ref|ZP_10369720.1| hypothetical protein HMPREF1071_00588 [Bacteroides salyersiae
CL02T12C01]
gi|392676130|gb|EIY69568.1| hypothetical protein HMPREF1071_00588 [Bacteroides salyersiae
CL02T12C01]
Length = 447
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/319 (30%), Positives = 150/319 (47%), Gaps = 49/319 (15%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWD----------------------LW-------- 56
LI N+ I G GT+DGQG+ WW LW
Sbjct: 115 LISAMDAENITIKG-EGTLDGQGKAWWTEFFRIYVDLEKNGMRELNKYQPLWERENDVEA 173
Query: 57 --------WNRTLKHT--RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMT 106
W+ TLK R ++ + + I + NSPFWT++P +C NVV+ G+T
Sbjct: 174 LYAETNEDWHGTLKRRFFRPPFIQPVRCRRVRIEGVKIINSPFWTVNPEFCDNVVVTGVT 233
Query: 107 ILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRV 166
I + +PNTDGI+P+S NV I DC+I GDD + +KSG D + P NI +
Sbjct: 234 I-HNVPSPNTDGINPESCRNVHISDCHISVGDDCITLKSGRDAQARRLGVPCENITITNC 292
Query: 167 SGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKME 226
+ + GV IGSEMSG + VT+ G+RIK+ +GRGG +E+I + NI M
Sbjct: 293 TMLSGH-GGVVIGSEMSGSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNIIMS 351
Query: 227 RVKI-PIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEIC 285
+K + ++ ++ P E + P R IS + +V + G+ +I
Sbjct: 352 NIKREAVVLNLKYSEMPVEPMSERT-PLFRDISISGLTAVGVKTPVKIVGLEEAPVTDII 410
Query: 286 MKNVSLLGLAPSAKWQCQF 304
++++++ +A+ +C F
Sbjct: 411 LRDINV----KNAREKCIF 425
>gi|418409920|ref|ZP_12983231.1| polygalacturonase-like protein [Agrobacterium tumefaciens 5A]
gi|358003969|gb|EHJ96299.1| polygalacturonase-like protein [Agrobacterium tumefaciens 5A]
Length = 523
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 147/298 (49%), Gaps = 41/298 (13%)
Query: 28 IHGDHLTNVIITGYNGTIDGQGQM--WWDLWWNRT---LKHTRGHLVELMNSNNILISNL 82
+H N++I G G +DG G WW W T + RG + L++ N+ +
Sbjct: 187 VHAIGADNLVIEG-TGVLDGSGDRGDWWS-WPKETRDGARRPRG--LHLVSCRNVGLFGF 242
Query: 83 TFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVA 142
T RN+P WT+HP C + G+TI AP N+PNTDG +P+S NV I GDD +A
Sbjct: 243 TIRNAPSWTVHPQGCETLKAAGLTISAPHNSPNTDGFNPESCRNVTISGVRFSVGDDCIA 302
Query: 143 VKSGW-------DHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLH 195
VK+G DH + ++ R G G+ IGSEMSGG+ NVTV+
Sbjct: 303 VKAGKRGPNGEDDHLAETRGVSVRHCLMERGHG------GLVIGSEMSGGVHNVTVEDCD 356
Query: 196 VWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPD----EGW----D 247
+ G+R+KT +GRGG + N+T+R + ++ V+ +S ++ H D +GW D
Sbjct: 357 MVGTDRGLRLKTRRGRGGSVSNVTMRRVLLDGVQTA--LSANAHYHCDADGHDGWVQSRD 414
Query: 248 PKALPKIRGISFVNVVSVNTTK-------APVLAGIIGTQFEEICMKNVSLLGLAPSA 298
P P G F++ ++V + A V G+ I ++N++++ P A
Sbjct: 415 PA--PVDYGTPFIDGITVEDVEIRHLAHAAGVFLGLPEAPIRNIAIRNLTIVSHDPVA 470
>gi|408376656|ref|ZP_11174260.1| Polygalacturonase [Agrobacterium albertimagni AOL15]
gi|407749346|gb|EKF60858.1| Polygalacturonase [Agrobacterium albertimagni AOL15]
Length = 503
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/280 (33%), Positives = 145/280 (51%), Gaps = 17/280 (6%)
Query: 26 SLIHGDHLTNVIITGYNGTIDGQGQM--WWDLWWNRTLKHTRG-HLVELMNSNNILISNL 82
SL++ N+ I G G +DG G WW W T R + L ++ I+ +
Sbjct: 180 SLLNAIDCDNLTICG-QGIVDGGGDRGDWW-TWPKETRDGARRPRTMFLSGCRHLTIAGI 237
Query: 83 TFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVA 142
T RNSP WT+HPV C +V+ G+TI ++PNTDG++P+SS N+ + I GDD VA
Sbjct: 238 TVRNSPSWTVHPVLCEDVLAVGLTIRNHPDSPNTDGLNPESSQNIRLVGLDISVGDDCVA 297
Query: 143 VKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAG 202
+K+G RP+ N+ +R V +GSEMS GI +V++ + H + G
Sbjct: 298 IKAGKRDPRGGPDRPTRNVEIRNCL-MQRGHGAVVMGSEMSQGISDVSISRCHFFGTDRG 356
Query: 203 VRIKTDKGRGGYIENITIRNIKMERVKIPIRI-------SRGSNDH-PDEGWDPKAL--P 252
+RIKT +GRGG + I++ + +ME V PI + + G +D+ P +L P
Sbjct: 357 LRIKTRRGRGGTVSKISVHDCRMEDVATPIAVNAFYFCDADGRSDYVQSRTALPVSLTTP 416
Query: 253 KIRGISFVNV-VSVNTTKAPVLAGIIGTQFEEICMKNVSL 291
KI GI N+ VS T A V G+ + + + + +S+
Sbjct: 417 KIEGIDIRNLEVSGAETAAAVFYGLPESTIDAVSIDGMSI 456
>gi|431798433|ref|YP_007225337.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430789198|gb|AGA79327.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 477
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 129/232 (55%), Gaps = 11/232 (4%)
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+ R V+ N+L+ + NSP W ++PV C NV I+G+T+ + + PN+DG DP+
Sbjct: 221 YLRPQFVQPYRCKNVLVEGVKIVNSPMWILNPVLCENVTIEGVTVES--HGPNSDGCDPE 278
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SS NV I+DCY +GDD +A+KSG + G + PS NII++ GV IGSE+
Sbjct: 279 SSKNVLIKDCYFNTGDDCIAIKSGRNADGRRINVPSENIIIQNCK-MADGHGGVVIGSEI 337
Query: 183 SGGIFNVTVD--QLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSND 240
SGG+ NV + +++ +RIKT RGG IE+I +RNI + +I ++ R +
Sbjct: 338 SGGVRNVFAENCEMNSPHLDRALRIKTSSMRGGIIEDIYLRNIDVG--QIAQQVVRVNMF 395
Query: 241 HPDEGWDPKALPKIRGISFVNVVSVNTTKAPV-LAGIIGTQFEEICMKNVSL 291
+ D G +P +R I N+ N K V L G + E I ++NV++
Sbjct: 396 YEDSG---AYVPTVRNIHVENMTVENGGKVGVLLEGYENSPVENITLENVNI 444
>gi|154502614|ref|ZP_02039674.1| hypothetical protein RUMGNA_00427 [Ruminococcus gnavus ATCC 29149]
gi|153796806|gb|EDN79226.1| polygalacturonase (pectinase) [Ruminococcus gnavus ATCC 29149]
Length = 532
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/309 (30%), Positives = 152/309 (49%), Gaps = 25/309 (8%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKHTRG----HLVELMNSNNILISNL 82
+++G + +V I G GTIDG W+ WW K RG ++ L ++ I+ +
Sbjct: 192 IMNGIGIKDVTICG-EGTIDGNAS--WENWW-LDAKEVRGAARPRMIFLNRCEDVTITGI 247
Query: 83 TFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVA 142
T +NSP W IHP +C ++ G+T+L P +PNTDG++P+S +V I C GDD +A
Sbjct: 248 TVQNSPSWNIHPYFCSHLKFIGVTVLGPKVSPNTDGLNPESCDDVEITGCLFSVGDDCIA 307
Query: 143 VKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAG 202
VK+G G PSSNI +R+ S + +GSEM+ GI N+ Q + G
Sbjct: 308 VKAGKISVGAKYKVPSSNIRIRQCCMRDGHGS-ITLGSEMAAGIKNLQARQCVFLNTDRG 366
Query: 203 VRIKTDKGRG--GYIENITIRNIKMERV---KIPIRISRGSNDHPD------EGWDPKAL 251
+RIKT +GRG I+ I +I+M+ V P I+ PD + +P A+
Sbjct: 367 LRIKTRRGRGKDAVIDGILFEDIRMDSVLTLLTPFVINSFYFCDPDGHSEYVQCKEPLAV 426
Query: 252 ----PKIRGISFVNVVSVNT-TKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQCQFVS 306
P+I+ + F N+ + N A G+ + E + MK++ + +A Q +
Sbjct: 427 DERTPQIKELCFRNIQAKNCHVAAAFFYGLPEQKIERVEMKHIQVSYAEDAASGQPAMMD 486
Query: 307 GFTSQVFPL 315
G + +
Sbjct: 487 GIDQNICKM 495
>gi|261207238|ref|ZP_05921927.1| glycoside hydrolase, family 28 [Enterococcus faecium TC 6]
gi|289567178|ref|ZP_06447568.1| glycoside hydrolase, family 28 [Enterococcus faecium D344SRF]
gi|294614358|ref|ZP_06694275.1| glycoside hydrolase, family 28 [Enterococcus faecium E1636]
gi|430850287|ref|ZP_19468050.1| glycosyl hydrolase [Enterococcus faecium E1185]
gi|260078866|gb|EEW66568.1| glycoside hydrolase, family 28 [Enterococcus faecium TC 6]
gi|289161037|gb|EFD08947.1| glycoside hydrolase, family 28 [Enterococcus faecium D344SRF]
gi|291592830|gb|EFF24422.1| glycoside hydrolase, family 28 [Enterococcus faecium E1636]
gi|430535912|gb|ELA76303.1| glycosyl hydrolase [Enterococcus faecium E1185]
Length = 436
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 120/217 (55%), Gaps = 23/217 (10%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWWNRTLKH-TRGHLVE------------------LMNSN 75
+++I G G IDGQG WW+L+W + K TR + L ++
Sbjct: 103 DILIEG-KGIIDGQGDHWWELYWGKDQKSGTRAEYDQKGLRWIADYAIKRPRACLLYHAE 161
Query: 76 NILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIE 135
++++ +L F+ S FW + Y +V+++ + I+ + P+TDGID DSSTNV I +C +
Sbjct: 162 HVVVRDLIFQKSGFWNLQITYSNDVLVEKV-IIRNNDGPSTDGIDIDSSTNVRIYECDLA 220
Query: 136 SGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLH 195
GDD +A+KSG D G + R SS I V R + GV IGSE+S G+ +V + +
Sbjct: 221 CGDDCIAIKSGRDGNGARVNRKSSRIEVARCK--IRSGYGVTIGSEVSAGVSDVYIHDID 278
Query: 196 VWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPI 232
+ + G+R+K+ K RGG IENI + N+ M V+ P
Sbjct: 279 FFQSDCGIRMKSSKERGGVIENIRVENLNMIDVQFPF 315
>gi|182416708|ref|ZP_02948108.1| glycoside Hydrolase Family 28 [Clostridium butyricum 5521]
gi|237667049|ref|ZP_04527033.1| glycoside Hydrolase Family 28 [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|182379433|gb|EDT76927.1| glycoside Hydrolase Family 28 [Clostridium butyricum 5521]
gi|237655397|gb|EEP52953.1| glycoside Hydrolase Family 28 [Clostridium butyricum E4 str. BoNT E
BL5262]
Length = 511
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/253 (32%), Positives = 138/253 (54%), Gaps = 15/253 (5%)
Query: 57 WNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNT 116
+N + R ++ S NILI ++T NSPFW ++PV C N+ I +T+ + L N
Sbjct: 230 FNDEISTIRPPFIQPYKSKNILIKDITILNSPFWEVNPVLCENIKIDSITVDSHL--YNN 287
Query: 117 DGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGV 176
DG+DP+S ++ IEDC+ +GDD +A+KSG ++ G + PS NII+R + G+
Sbjct: 288 DGVDPESCKDMIIEDCHFTTGDDCIAIKSGRNNEGRNIGVPSQNIIIRN-NKFEDGHGGI 346
Query: 177 GIGSEMSGGIFNVTVDQLHVWDAAA---GVRIKTDKGRGGYIENITIRNIKMERVKIPIR 233
IGSE+SGG+ ++ + +D++ +R KT+ RGG +ENI ++N + + KI +
Sbjct: 347 TIGSEISGGVNDIFAHD-NYFDSSELDYPIRFKTNAERGGKLENIYVKNSVVNKSKIAV- 404
Query: 234 ISRGSNDHPDEGWDPKALPKIRGISFVNVV-----SVNTTKAPVLAGIIGTQFEEICMKN 288
++ +EG + +P +R I+ N+ S++ A L G E I +++
Sbjct: 405 --IHADFFYEEGTNGNYMPILRNITLSNIKTVEGGSIDANNALFLKGFKDAPIENILIED 462
Query: 289 VSLLGLAPSAKWQ 301
V L G+ A Q
Sbjct: 463 VYLNGVKGDAVLQ 475
>gi|257883313|ref|ZP_05662966.1| glycoside hydrolase [Enterococcus faecium 1,231,502]
gi|294622163|ref|ZP_06701235.1| glycoside hydrolase, family 28 [Enterococcus faecium U0317]
gi|424791207|ref|ZP_18217685.1| polygalacturonase [Enterococcus faecium V689]
gi|424796702|ref|ZP_18222393.1| polygalacturonase [Enterococcus faecium S447]
gi|424949498|ref|ZP_18365166.1| polygalacturonase [Enterococcus faecium R496]
gi|424953671|ref|ZP_18368620.1| polygalacturonase [Enterococcus faecium R494]
gi|424956677|ref|ZP_18371442.1| polygalacturonase [Enterococcus faecium R446]
gi|424968089|ref|ZP_18381747.1| polygalacturonase [Enterococcus faecium P1140]
gi|424994453|ref|ZP_18406390.1| polygalacturonase [Enterococcus faecium ERV168]
gi|424998615|ref|ZP_18410289.1| polygalacturonase [Enterococcus faecium ERV165]
gi|425001111|ref|ZP_18412641.1| polygalacturonase [Enterococcus faecium ERV161]
gi|425005192|ref|ZP_18416457.1| polygalacturonase [Enterococcus faecium ERV102]
gi|425011657|ref|ZP_18422540.1| polygalacturonase [Enterococcus faecium E422]
gi|425017825|ref|ZP_18428310.1| polygalacturonase [Enterococcus faecium C621]
gi|425032265|ref|ZP_18437333.1| polygalacturonase [Enterococcus faecium 515]
gi|425039363|ref|ZP_18443906.1| polygalacturonase [Enterococcus faecium 513]
gi|427397514|ref|ZP_18889996.1| hypothetical protein HMPREF9307_02172 [Enterococcus durans
FB129-CNAB-4]
gi|430860949|ref|ZP_19478544.1| glycosyl hydrolase [Enterococcus faecium E1573]
gi|430968697|ref|ZP_19487858.1| glycosyl hydrolase [Enterococcus faecium E1576]
gi|431017550|ref|ZP_19490427.1| glycosyl hydrolase [Enterococcus faecium E1578]
gi|431261224|ref|ZP_19505721.1| glycosyl hydrolase [Enterococcus faecium E1623]
gi|431777891|ref|ZP_19566132.1| glycosyl hydrolase [Enterococcus faecium E2560]
gi|431783620|ref|ZP_19571718.1| glycosyl hydrolase [Enterococcus faecium E6012]
gi|431786792|ref|ZP_19574790.1| glycosyl hydrolase [Enterococcus faecium E6045]
gi|447913735|ref|YP_007395147.1| Polygalacturonase [Enterococcus faecium NRRL B-2354]
gi|257818971|gb|EEV46299.1| glycoside hydrolase [Enterococcus faecium 1,231,502]
gi|291598332|gb|EFF29421.1| glycoside hydrolase, family 28 [Enterococcus faecium U0317]
gi|402919873|gb|EJX40434.1| polygalacturonase [Enterococcus faecium V689]
gi|402922629|gb|EJX42990.1| polygalacturonase [Enterococcus faecium S447]
gi|402934203|gb|EJX53573.1| polygalacturonase [Enterococcus faecium R496]
gi|402938575|gb|EJX57571.1| polygalacturonase [Enterococcus faecium R494]
gi|402945373|gb|EJX63728.1| polygalacturonase [Enterococcus faecium R446]
gi|402952951|gb|EJX70715.1| polygalacturonase [Enterococcus faecium P1140]
gi|402980028|gb|EJX95661.1| polygalacturonase [Enterococcus faecium ERV168]
gi|402982462|gb|EJX97925.1| polygalacturonase [Enterococcus faecium ERV165]
gi|402987164|gb|EJY02253.1| polygalacturonase [Enterococcus faecium ERV102]
gi|402987438|gb|EJY02501.1| polygalacturonase [Enterococcus faecium ERV161]
gi|402995993|gb|EJY10403.1| polygalacturonase [Enterococcus faecium E422]
gi|403003651|gb|EJY17535.1| polygalacturonase [Enterococcus faecium C621]
gi|403013574|gb|EJY26660.1| polygalacturonase [Enterococcus faecium 515]
gi|403016109|gb|EJY28944.1| polygalacturonase [Enterococcus faecium 513]
gi|425722190|gb|EKU85087.1| hypothetical protein HMPREF9307_02172 [Enterococcus durans
FB129-CNAB-4]
gi|430551267|gb|ELA91036.1| glycosyl hydrolase [Enterococcus faecium E1573]
gi|430554867|gb|ELA94435.1| glycosyl hydrolase [Enterococcus faecium E1576]
gi|430559249|gb|ELA98609.1| glycosyl hydrolase [Enterococcus faecium E1578]
gi|430576629|gb|ELB15266.1| glycosyl hydrolase [Enterococcus faecium E1623]
gi|430638495|gb|ELB74426.1| glycosyl hydrolase [Enterococcus faecium E2560]
gi|430644804|gb|ELB80385.1| glycosyl hydrolase [Enterococcus faecium E6012]
gi|430644943|gb|ELB80507.1| glycosyl hydrolase [Enterococcus faecium E6045]
gi|445189444|gb|AGE31086.1| Polygalacturonase [Enterococcus faecium NRRL B-2354]
Length = 436
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/217 (35%), Positives = 121/217 (55%), Gaps = 23/217 (10%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWWNRTLKH-TRGHLVE------------------LMNSN 75
+++I G G IDGQG WW+L+W + K TR + L ++
Sbjct: 103 DILIEG-KGIIDGQGDHWWELYWGKDQKSGTRAEYDQKGLRWIADYAIKRPRACLLYHAE 161
Query: 76 NILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIE 135
++++ +L F+ S FW + Y +V+++ + I+ + P+TDGID DSSTNV + +C +
Sbjct: 162 HVVVRDLIFQKSGFWNLQITYSNDVLVEKV-IIRNNDGPSTDGIDIDSSTNVRVYECDLA 220
Query: 136 SGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLH 195
GDD +A+KSG D G + R SS I V R + GV IGSE+S G+ +V + ++
Sbjct: 221 CGDDCIAIKSGRDGNGARVNRKSSRIEVARCK--IRSGYGVTIGSEVSAGVSDVYIHDIN 278
Query: 196 VWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPI 232
+ + G+R+K+ K RGG IENI + N+ M V+ P
Sbjct: 279 FFQSDCGIRMKSSKERGGVIENIRVENLNMIDVQFPF 315
>gi|427384860|ref|ZP_18881365.1| hypothetical protein HMPREF9447_02398 [Bacteroides oleiciplenus YIT
12058]
gi|425728121|gb|EKU90980.1| hypothetical protein HMPREF9447_02398 [Bacteroides oleiciplenus YIT
12058]
Length = 462
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 153/299 (51%), Gaps = 39/299 (13%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLWWN---------RTLKHT------------- 64
LI+ H+ N+ +TG GT++G G + W N R + T
Sbjct: 138 LIYAYHVQNIALTG-EGTVNGNGSKKFSPWNNIQTVEQEMLRKMGRTNVPVYRRVFGEGY 196
Query: 65 --RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
R +E N+ I +T +SPFW IHP++C NV+++ +T+ + + N DG DP+
Sbjct: 197 KLRPGFIEPFGCANVRIEGVTIIDSPFWVIHPIFCSNVIVRNVTVDS--HNYNNDGCDPE 254
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S NV IE C +GDD +A+KSG D+ + +P+ N+++R S + +GV IGSE+
Sbjct: 255 SCRNVLIEGCTFSTGDDAIAIKSGRDNDAWRIGQPTENVVIRNCSFRSKI-NGVCIGSEI 313
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIP-IRISRGSNDH 241
+GG+ N+ ++ + + ++ + K++ RG YI+++ +RN++ + V+ IR
Sbjct: 314 AGGVRNIFIENITIPKSSNAIYFKSNLDRGAYIQDVYVRNVQADTVRTALIRF------E 367
Query: 242 PDEGWDPKALPKIRGISFV--NVVSVNTTKAPV-LAGIIGTQFEEICMKNVSLLGLAPS 297
P+ + A SF+ NV + + + +AG + I +KNV+ +G P+
Sbjct: 368 PNYKGERSAFHPTLFNSFLIENVTCKQSNECGIYMAGFAERPLQNIVLKNVT-IGKVPT 425
>gi|436837106|ref|YP_007322322.1| glycoside hydrolase family 28 [Fibrella aestuarina BUZ 2]
gi|384068519|emb|CCH01729.1| glycoside hydrolase family 28 [Fibrella aestuarina BUZ 2]
Length = 777
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/269 (31%), Positives = 127/269 (47%), Gaps = 37/269 (13%)
Query: 65 RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSS 124
R ++V L +L+ +TF+NSP WT+HP+ C +V ++G+T+ A N DG+D +S
Sbjct: 448 RPNMVSLTRCQYVLLDGVTFQNSPAWTLHPLLCEHVTMRGVTVKNQWYAQNGDGVDLESC 507
Query: 125 TNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSG 184
N +E+C ++GDD + +KSG D G P+ N I+R G IGSEMSG
Sbjct: 508 RNGLLENCTFDTGDDGITIKSGRDEEGRKRGVPTENFIIRDCR-VYQAHGGFVIGSEMSG 566
Query: 185 GIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERV---KIPIRISRGSNDH 241
G+ N+ V G+R KT +GRGG +ENI + NI M ++ I + + D
Sbjct: 567 GVRNMYVSNCQFMGTDVGLRFKTARGRGGVVENIYVNNISMTQIAGEAILFDMYYAAKDP 626
Query: 242 PDEGWDPKALPKIRGIS-----------FVNVVSVNTTKAPVL----------------- 273
+ D LP I G FV+ VS + +L
Sbjct: 627 VPQAGDKNELPTIEGKPLNEGTPRFRSFFVHNVSCLGAETGILIRGLPEMPVSNILIENA 686
Query: 274 -----AGIIGTQFEEICMKNVSLLGLAPS 297
G++ + +I +KNVSLL P+
Sbjct: 687 VLQTRKGLVCIEASDIRLKNVSLLATEPT 715
>gi|255036065|ref|YP_003086686.1| glycoside hydrolase [Dyadobacter fermentans DSM 18053]
gi|254948821|gb|ACT93521.1| glycoside hydrolase family 28 [Dyadobacter fermentans DSM 18053]
Length = 455
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/232 (34%), Positives = 124/232 (53%), Gaps = 8/232 (3%)
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
H R ++ N+L+ T NSPFWTIHP C+NVVI + + A + N DG+DP+
Sbjct: 206 HLRPQFIQFNRCENVLMEGFTVTNSPFWTIHPYLCKNVVISRLKVYA--HGHNNDGVDPE 263
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S NV I DC + GDD +A+KSG + G + PS NI++R ++ V IGSE+
Sbjct: 264 MSQNVFITDCVFDQGDDAIAIKSGRNPEGWRLKTPSKNIVIRNLT-VKNGHQLVAIGSEL 322
Query: 183 SGGIFNVTVDQLHVWDAAA---GVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSN 239
SGGI NV + Q V D A + IKT++ GGY++NI N+ ++ + +
Sbjct: 323 SGGIENVDISQCQVVDGAKLNHLLFIKTNERMGGYVKNIYASNLTAGKIDLGVLGIETDV 382
Query: 240 DHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 291
+ P + K+ IS + + +++ + I+G + E+ +KNVS+
Sbjct: 383 LYQWRTLVPTKIRKLTPISDIYLSNISVKDVKFESRILGQK--ELPVKNVSM 432
>gi|430824494|ref|ZP_19443051.1| glycosyl hydrolase [Enterococcus faecium E0120]
gi|430868568|ref|ZP_19482862.1| glycosyl hydrolase [Enterococcus faecium E1574]
gi|431744399|ref|ZP_19533267.1| glycosyl hydrolase [Enterococcus faecium E2071]
gi|430441022|gb|ELA51165.1| glycosyl hydrolase [Enterococcus faecium E0120]
gi|430548832|gb|ELA88680.1| glycosyl hydrolase [Enterococcus faecium E1574]
gi|430605142|gb|ELB42547.1| glycosyl hydrolase [Enterococcus faecium E2071]
Length = 436
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/217 (35%), Positives = 120/217 (55%), Gaps = 23/217 (10%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWWNRTLKH-TRGHLVE------------------LMNSN 75
+++I G G IDGQG WW+L+W + K TR + L ++
Sbjct: 103 DILIEG-KGIIDGQGDHWWELYWGKDQKSGTRAEYDQKGLRWIADYAIKRPRACLLYHAE 161
Query: 76 NILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIE 135
++++ +L F+ S FW + Y +V+++ + I+ + P+TDGID DSSTNV + +C +
Sbjct: 162 HVVVRDLIFQKSGFWNLQITYSNDVLVEKV-IIRNNDGPSTDGIDIDSSTNVRVYECDLA 220
Query: 136 SGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLH 195
GDD +A+KSG D G + R SS I V R + GV IGSE+S G+ +V + +
Sbjct: 221 CGDDCIAIKSGRDGNGARVNRKSSRIEVARCK--IRSGYGVTIGSEVSAGVSDVYIHDID 278
Query: 196 VWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPI 232
+ + G+R+K+ K RGG IENI + N+ M V+ P
Sbjct: 279 FFQSDCGIRMKSSKERGGVIENIRVENLNMIDVQFPF 315
>gi|424978123|ref|ZP_18391071.1| polygalacturonase [Enterococcus faecium P1123]
gi|402963044|gb|EJX79942.1| polygalacturonase [Enterococcus faecium P1123]
Length = 426
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/217 (35%), Positives = 120/217 (55%), Gaps = 23/217 (10%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWWNRTLKH-TRGHLVE------------------LMNSN 75
+++I G G IDGQG WW+L+W + K TR + L ++
Sbjct: 93 DILIEG-KGIIDGQGDHWWELYWGKDQKSGTRAEYDQKGLRWIADYAIKRPRACLLYHAE 151
Query: 76 NILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIE 135
++++ +L F+ S FW + Y +V+++ + I+ + P+TDGID DSSTNV + +C +
Sbjct: 152 HVVVRDLIFQKSGFWNLQITYSNDVLVEKV-IIRNNDGPSTDGIDIDSSTNVRVYECDLA 210
Query: 136 SGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLH 195
GDD +A+KSG D G + R SS I V R + GV IGSE+S G+ +V + +
Sbjct: 211 CGDDCIAIKSGRDGNGARVNRKSSRIEVARCK--IRSGYGVTIGSEVSAGVSDVYIHDID 268
Query: 196 VWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPI 232
+ + G+R+K+ K RGG IENI + N+ M V+ P
Sbjct: 269 FFQSDCGIRMKSSKERGGVIENIRVENLNMIDVQFPF 305
>gi|293557205|ref|ZP_06675755.1| glycoside hydrolase, family 28 [Enterococcus faecium E1039]
gi|291600657|gb|EFF30959.1| glycoside hydrolase, family 28 [Enterococcus faecium E1039]
Length = 443
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/217 (35%), Positives = 120/217 (55%), Gaps = 23/217 (10%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWWNRTLKH-TRGHLVE------------------LMNSN 75
+++I G G IDGQG WW+L+W + K TR + L ++
Sbjct: 110 DILIEG-KGIIDGQGDHWWELYWGKDQKSGTRAEYDQKGLRWIADYAIKRPRACLLYHAE 168
Query: 76 NILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIE 135
++++ +L F+ S FW + Y +V+++ + I+ + P+TDGID DSSTNV + +C +
Sbjct: 169 HVVVRDLIFQKSGFWNLQITYSNDVLVEKV-IIRNNDGPSTDGIDIDSSTNVRVYECDLA 227
Query: 136 SGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLH 195
GDD +A+KSG D G + R SS I V R + GV IGSE+S G+ +V + +
Sbjct: 228 CGDDCIAIKSGRDGNGARVNRKSSRIEVARCK--IRSGYGVTIGSEVSAGVSDVYIHDID 285
Query: 196 VWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPI 232
+ + G+R+K+ K RGG IENI + N+ M V+ P
Sbjct: 286 FFQSDCGIRMKSSKERGGVIENIRVENLNMIDVQFPF 322
>gi|257880502|ref|ZP_05660155.1| glycoside hydrolase [Enterococcus faecium 1,230,933]
gi|257891467|ref|ZP_05671120.1| glycoside hydrolase [Enterococcus faecium 1,231,410]
gi|257894590|ref|ZP_05674243.1| glycoside hydrolase [Enterococcus faecium 1,231,408]
gi|260562501|ref|ZP_05833011.1| glycoside hydrolase, family 28 [Enterococcus faecium C68]
gi|293559900|ref|ZP_06676412.1| glycoside hydrolase, family 28 [Enterococcus faecium E1162]
gi|293568218|ref|ZP_06679552.1| glycoside hydrolase, family 28 [Enterococcus faecium E1071]
gi|314938533|ref|ZP_07845818.1| polygalacturonase [Enterococcus faecium TX0133a04]
gi|314942449|ref|ZP_07849289.1| polygalacturonase [Enterococcus faecium TX0133C]
gi|314952938|ref|ZP_07855905.1| polygalacturonase [Enterococcus faecium TX0133A]
gi|314992207|ref|ZP_07857650.1| polygalacturonase [Enterococcus faecium TX0133B]
gi|314995236|ref|ZP_07860348.1| polygalacturonase [Enterococcus faecium TX0133a01]
gi|383329848|ref|YP_005355732.1| polygalacturonase [Enterococcus faecium Aus0004]
gi|406581503|ref|ZP_11056645.1| polygalacturonase [Enterococcus sp. GMD4E]
gi|406583794|ref|ZP_11058839.1| polygalacturonase [Enterococcus sp. GMD3E]
gi|406586138|ref|ZP_11061075.1| polygalacturonase [Enterococcus sp. GMD2E]
gi|406591702|ref|ZP_11065948.1| polygalacturonase [Enterococcus sp. GMD1E]
gi|410936303|ref|ZP_11368170.1| polygalacturonase [Enterococcus sp. GMD5E]
gi|415891700|ref|ZP_11549789.1| glycoside hydrolase, family 28 [Enterococcus faecium E4453]
gi|416141648|ref|ZP_11599441.1| glycoside hydrolase, family 28 [Enterococcus faecium E4452]
gi|424845982|ref|ZP_18270582.1| polygalacturonase [Enterococcus faecium R501]
gi|424854970|ref|ZP_18279301.1| polygalacturonase [Enterococcus faecium R499]
gi|424907683|ref|ZP_18331153.1| polygalacturonase [Enterococcus faecium R497]
gi|424960554|ref|ZP_18375059.1| polygalacturonase [Enterococcus faecium P1986]
gi|424964733|ref|ZP_18378800.1| polygalacturonase [Enterococcus faecium P1190]
gi|424971125|ref|ZP_18384586.1| polygalacturonase [Enterococcus faecium P1139]
gi|424974628|ref|ZP_18387853.1| polygalacturonase [Enterococcus faecium P1137]
gi|424981126|ref|ZP_18393878.1| polygalacturonase [Enterococcus faecium ERV99]
gi|424983701|ref|ZP_18396276.1| polygalacturonase [Enterococcus faecium ERV69]
gi|424987499|ref|ZP_18399873.1| polygalacturonase [Enterococcus faecium ERV38]
gi|424992279|ref|ZP_18404358.1| polygalacturonase [Enterococcus faecium ERV26]
gi|425007167|ref|ZP_18418312.1| polygalacturonase [Enterococcus faecium ERV1]
gi|425014690|ref|ZP_18425355.1| polygalacturonase [Enterococcus faecium E417]
gi|425021599|ref|ZP_18431838.1| polygalacturonase [Enterococcus faecium C497]
gi|425023083|ref|ZP_18433222.1| polygalacturonase [Enterococcus faecium C1904]
gi|425034686|ref|ZP_18439563.1| polygalacturonase [Enterococcus faecium 514]
gi|425042059|ref|ZP_18446425.1| polygalacturonase [Enterococcus faecium 511]
gi|425046653|ref|ZP_18450650.1| polygalacturonase [Enterococcus faecium 510]
gi|425047905|ref|ZP_18451836.1| polygalacturonase [Enterococcus faecium 509]
gi|425051840|ref|ZP_18455481.1| polygalacturonase [Enterococcus faecium 506]
gi|425060678|ref|ZP_18463962.1| polygalacturonase [Enterococcus faecium 503]
gi|430821821|ref|ZP_19440408.1| glycosyl hydrolase [Enterococcus faecium E0045]
gi|430827440|ref|ZP_19445583.1| glycosyl hydrolase [Enterococcus faecium E0164]
gi|430830082|ref|ZP_19448148.1| glycosyl hydrolase [Enterococcus faecium E0269]
gi|430832646|ref|ZP_19450686.1| glycosyl hydrolase [Enterococcus faecium E0333]
gi|430845573|ref|ZP_19463457.1| glycosyl hydrolase [Enterococcus faecium E1050]
gi|430848406|ref|ZP_19466225.1| glycosyl hydrolase [Enterococcus faecium E1133]
gi|430856188|ref|ZP_19473891.1| glycosyl hydrolase [Enterococcus faecium E1392]
gi|430921156|ref|ZP_19485323.1| glycosyl hydrolase [Enterococcus faecium E1575]
gi|431220446|ref|ZP_19501380.1| glycosyl hydrolase [Enterococcus faecium E1620]
gi|431243678|ref|ZP_19503851.1| glycosyl hydrolase [Enterococcus faecium E1622]
gi|431323331|ref|ZP_19509135.1| glycosyl hydrolase [Enterococcus faecium E1626]
gi|431388094|ref|ZP_19511700.1| glycosyl hydrolase [Enterococcus faecium E1627]
gi|431472779|ref|ZP_19514507.1| glycosyl hydrolase [Enterococcus faecium E1630]
gi|431520920|ref|ZP_19516634.1| glycosyl hydrolase [Enterococcus faecium E1634]
gi|431565479|ref|ZP_19519841.1| glycosyl hydrolase [Enterococcus faecium E1731]
gi|431747812|ref|ZP_19536581.1| glycosyl hydrolase [Enterococcus faecium E2134]
gi|431750357|ref|ZP_19539076.1| glycosyl hydrolase [Enterococcus faecium E2297]
gi|431755435|ref|ZP_19544084.1| glycosyl hydrolase [Enterococcus faecium E2883]
gi|431761409|ref|ZP_19549983.1| glycosyl hydrolase [Enterococcus faecium E3346]
gi|431766527|ref|ZP_19555004.1| glycosyl hydrolase [Enterococcus faecium E4215]
gi|431769102|ref|ZP_19557530.1| glycosyl hydrolase [Enterococcus faecium E1321]
gi|431771653|ref|ZP_19560033.1| glycosyl hydrolase [Enterococcus faecium E1644]
gi|431774523|ref|ZP_19562830.1| glycosyl hydrolase [Enterococcus faecium E2369]
gi|431780630|ref|ZP_19568803.1| glycosyl hydrolase [Enterococcus faecium E4389]
gi|257814730|gb|EEV43488.1| glycoside hydrolase [Enterococcus faecium 1,230,933]
gi|257827827|gb|EEV54453.1| glycoside hydrolase [Enterococcus faecium 1,231,410]
gi|257830969|gb|EEV57576.1| glycoside hydrolase [Enterococcus faecium 1,231,408]
gi|260073186|gb|EEW61531.1| glycoside hydrolase, family 28 [Enterococcus faecium C68]
gi|291589118|gb|EFF20932.1| glycoside hydrolase, family 28 [Enterococcus faecium E1071]
gi|291606172|gb|EFF35594.1| glycoside hydrolase, family 28 [Enterococcus faecium E1162]
gi|313590492|gb|EFR69337.1| polygalacturonase [Enterococcus faecium TX0133a01]
gi|313593265|gb|EFR72110.1| polygalacturonase [Enterococcus faecium TX0133B]
gi|313595010|gb|EFR73855.1| polygalacturonase [Enterococcus faecium TX0133A]
gi|313598757|gb|EFR77602.1| polygalacturonase [Enterococcus faecium TX0133C]
gi|313642161|gb|EFS06741.1| polygalacturonase [Enterococcus faecium TX0133a04]
gi|364090042|gb|EHM32674.1| glycoside hydrolase, family 28 [Enterococcus faecium E4452]
gi|364093760|gb|EHM35997.1| glycoside hydrolase, family 28 [Enterococcus faecium E4453]
gi|378939542|gb|AFC64614.1| polygalacturonase [Enterococcus faecium Aus0004]
gi|402919810|gb|EJX40376.1| polygalacturonase [Enterococcus faecium R501]
gi|402930037|gb|EJX49740.1| polygalacturonase [Enterococcus faecium R497]
gi|402931903|gb|EJX51454.1| polygalacturonase [Enterococcus faecium R499]
gi|402945951|gb|EJX64271.1| polygalacturonase [Enterococcus faecium P1190]
gi|402947336|gb|EJX65555.1| polygalacturonase [Enterococcus faecium P1986]
gi|402955971|gb|EJX73460.1| polygalacturonase [Enterococcus faecium P1137]
gi|402959993|gb|EJX77186.1| polygalacturonase [Enterococcus faecium P1139]
gi|402964601|gb|EJX81373.1| polygalacturonase [Enterococcus faecium ERV99]
gi|402970834|gb|EJX87147.1| polygalacturonase [Enterococcus faecium ERV69]
gi|402973957|gb|EJX90038.1| polygalacturonase [Enterococcus faecium ERV26]
gi|402974321|gb|EJX90380.1| polygalacturonase [Enterococcus faecium ERV38]
gi|402995601|gb|EJY10044.1| polygalacturonase [Enterococcus faecium ERV1]
gi|402998000|gb|EJY12285.1| polygalacturonase [Enterococcus faecium E417]
gi|403006140|gb|EJY19807.1| polygalacturonase [Enterococcus faecium C497]
gi|403010837|gb|EJY24182.1| polygalacturonase [Enterococcus faecium C1904]
gi|403019832|gb|EJY32411.1| polygalacturonase [Enterococcus faecium 514]
gi|403023546|gb|EJY35791.1| polygalacturonase [Enterococcus faecium 510]
gi|403024469|gb|EJY36625.1| polygalacturonase [Enterococcus faecium 511]
gi|403032233|gb|EJY43801.1| polygalacturonase [Enterococcus faecium 509]
gi|403036566|gb|EJY47912.1| polygalacturonase [Enterococcus faecium 506]
gi|403042389|gb|EJY53347.1| polygalacturonase [Enterococcus faecium 503]
gi|404452562|gb|EJZ99746.1| polygalacturonase [Enterococcus sp. GMD4E]
gi|404456117|gb|EKA02874.1| polygalacturonase [Enterococcus sp. GMD3E]
gi|404461646|gb|EKA07540.1| polygalacturonase [Enterococcus sp. GMD2E]
gi|404467225|gb|EKA12407.1| polygalacturonase [Enterococcus sp. GMD1E]
gi|410735249|gb|EKQ77163.1| polygalacturonase [Enterococcus sp. GMD5E]
gi|430438093|gb|ELA48581.1| glycosyl hydrolase [Enterococcus faecium E0045]
gi|430444048|gb|ELA53960.1| glycosyl hydrolase [Enterococcus faecium E0164]
gi|430479137|gb|ELA56411.1| glycosyl hydrolase [Enterococcus faecium E0269]
gi|430479701|gb|ELA56917.1| glycosyl hydrolase [Enterococcus faecium E0333]
gi|430495380|gb|ELA71555.1| glycosyl hydrolase [Enterococcus faecium E1050]
gi|430534977|gb|ELA75402.1| glycosyl hydrolase [Enterococcus faecium E1133]
gi|430545274|gb|ELA85257.1| glycosyl hydrolase [Enterococcus faecium E1392]
gi|430554049|gb|ELA93721.1| glycosyl hydrolase [Enterococcus faecium E1575]
gi|430569541|gb|ELB08542.1| glycosyl hydrolase [Enterococcus faecium E1620]
gi|430571647|gb|ELB10533.1| glycosyl hydrolase [Enterococcus faecium E1622]
gi|430577979|gb|ELB16555.1| glycosyl hydrolase [Enterococcus faecium E1626]
gi|430580359|gb|ELB18832.1| glycosyl hydrolase [Enterococcus faecium E1627]
gi|430583564|gb|ELB21926.1| glycosyl hydrolase [Enterococcus faecium E1630]
gi|430585063|gb|ELB23364.1| glycosyl hydrolase [Enterococcus faecium E1634]
gi|430589388|gb|ELB27517.1| glycosyl hydrolase [Enterococcus faecium E1731]
gi|430604699|gb|ELB42134.1| glycosyl hydrolase [Enterococcus faecium E2134]
gi|430609784|gb|ELB46961.1| glycosyl hydrolase [Enterococcus faecium E2297]
gi|430616657|gb|ELB53552.1| glycosyl hydrolase [Enterococcus faecium E2883]
gi|430621550|gb|ELB58311.1| glycosyl hydrolase [Enterococcus faecium E3346]
gi|430626087|gb|ELB62675.1| glycosyl hydrolase [Enterococcus faecium E4215]
gi|430628018|gb|ELB64476.1| glycosyl hydrolase [Enterococcus faecium E1321]
gi|430632927|gb|ELB69117.1| glycosyl hydrolase [Enterococcus faecium E1644]
gi|430633928|gb|ELB70073.1| glycosyl hydrolase [Enterococcus faecium E2369]
gi|430639085|gb|ELB74967.1| glycosyl hydrolase [Enterococcus faecium E4389]
Length = 436
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/217 (35%), Positives = 120/217 (55%), Gaps = 23/217 (10%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWWNRTLKH-TRGHLVE------------------LMNSN 75
+++I G G IDGQG WW+L+W + K TR + L ++
Sbjct: 103 DILIEG-KGIIDGQGDHWWELYWGKDQKSGTRAEYDQKGLRWIADYAIKRPRACLLYHAE 161
Query: 76 NILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIE 135
++++ +L F+ S FW + Y +V+++ + I+ + P+TDGID DSSTNV + +C +
Sbjct: 162 HVVVRDLIFQKSGFWNLQITYSNDVLVEKV-IIRNNDGPSTDGIDIDSSTNVRVYECDLA 220
Query: 136 SGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLH 195
GDD +A+KSG D G + R SS I V R + GV IGSE+S G+ +V + +
Sbjct: 221 CGDDCIAIKSGRDGNGARVNRKSSRIEVARCK--IRSGYGVTIGSEVSAGVSDVYIHDID 278
Query: 196 VWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPI 232
+ + G+R+K+ K RGG IENI + N+ M V+ P
Sbjct: 279 FFQSDCGIRMKSSKERGGVIENIRVENLNMIDVQFPF 315
>gi|410636673|ref|ZP_11347265.1| polygalacturonase, putative, pga28A [Glaciecola lipolytica E3]
gi|410143760|dbj|GAC14470.1| polygalacturonase, putative, pga28A [Glaciecola lipolytica E3]
Length = 476
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/232 (34%), Positives = 129/232 (55%), Gaps = 9/232 (3%)
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+ R ++ + N+LI +T +NSPFW ++PV C NV ++G I PN+DG DP+
Sbjct: 224 YLRPPFIQPIRCKNVLIEGVTIKNSPFWLVNPVLCENVTVQG--IHCESYGPNSDGCDPE 281
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
+ +V I++C ++GDD +A+KSG + G + S NI++ GV IGSE+
Sbjct: 282 ACKDVLIQNCIFDTGDDCIAIKSGRNADGRRVGVASENILIENCQ-MKAGHGGVVIGSEI 340
Query: 183 SGGIFNVTVD--QLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSND 240
SGG+ N+ VD ++ D G+RIKT+ RGG+++N+ RNI + +VK I I N
Sbjct: 341 SGGVRNLYVDNCEMSSPDLDRGIRIKTNSIRGGHLKNLNYRNINIGQVKDAIVI----NF 396
Query: 241 HPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLL 292
+ +EG K P + I N+ + T+A L G T + +KN++ +
Sbjct: 397 YYEEGDVGKFTPVLEDIRIENLWVEHATRAFSLRGYPHTPITGVTLKNLTFV 448
>gi|257886390|ref|ZP_05666043.1| glycoside hydrolase [Enterococcus faecium 1,231,501]
gi|257822246|gb|EEV49376.1| glycoside hydrolase [Enterococcus faecium 1,231,501]
Length = 436
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/217 (35%), Positives = 120/217 (55%), Gaps = 23/217 (10%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWWNRTLKH-TRGHLVE------------------LMNSN 75
+++I G G IDGQG WW+L+W + K TR + L ++
Sbjct: 103 DILIEG-KGIIDGQGDHWWELYWGKDQKSGTRAEYDQKGLRWIADYAIKRPRACLLYHAE 161
Query: 76 NILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIE 135
++++ +L F+ S FW + Y +V+++ + I+ + P+TDGID DSSTNV + +C +
Sbjct: 162 HVVVRDLIFQKSGFWNLQITYSNDVLVEKV-IIRNNDGPSTDGIDIDSSTNVRVYECDLA 220
Query: 136 SGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLH 195
GDD +A+KSG D G + R SS I V R + GV IGSE+S G+ +V + +
Sbjct: 221 CGDDCIAIKSGRDGNGARVNRKSSRIEVARCK--IRSGYGVTIGSEVSAGVSDVYIHDID 278
Query: 196 VWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPI 232
+ + G+R+K+ K RGG IENI + N+ M V+ P
Sbjct: 279 FFQSDCGIRMKSSKERGGVIENIRVENLNMIDVQFPF 315
>gi|237721278|ref|ZP_04551759.1| LOW QUALITY PROTEIN: glycoside hydrolase family 28 protein
[Bacteroides sp. 2_2_4]
gi|229449074|gb|EEO54865.1| LOW QUALITY PROTEIN: glycoside hydrolase family 28 protein
[Bacteroides sp. 2_2_4]
Length = 380
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/292 (31%), Positives = 142/292 (48%), Gaps = 50/292 (17%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQM--WWDLW---------------------------- 56
LI+ +N+ ITG G IDGQG M WW +
Sbjct: 52 LIYAYGESNIAITG-KGIIDGQGSMETWWPMCGAVKYGWKEGMVAQRNGGRERLLMYGET 110
Query: 57 ----WNRTLKHTRG---HLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILA 109
+ R +K G L+ L + + ILI +T NSPFW IHP++C ++++ G+T+
Sbjct: 111 STPVYKRLMKPEDGMRPQLLNLHSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFN 170
Query: 110 PLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGT 169
PN DG DP+S NV IE+C ++GDD +A+KSG + G PS NIIVR
Sbjct: 171 --RGPNGDGCDPESCKNVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMR 228
Query: 170 TPTCSGVGIGSEMSGGIFNVTVD--QLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMER 227
GV IGSE+SGG N+ V+ ++ + +RIKT RGG IEN+ +RN+ + +
Sbjct: 229 NGH-GGVVIGSEISGGYRNLFVEDCRMDSPNLDRVIRIKTSTCRGGLIENVFVRNVTVGQ 287
Query: 228 VK---IPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGI 276
+ + I + + + G+D P +R + NV + ++ G+
Sbjct: 288 CREAVLRINLQYENREKCKRGFD----PIVRNVHLKNVTCEKSKLGVLIIGL 335
>gi|304317802|ref|YP_003852947.1| glycoside hydrolase family protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302779304|gb|ADL69863.1| glycoside hydrolase family 28 [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 519
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/309 (33%), Positives = 148/309 (47%), Gaps = 23/309 (7%)
Query: 26 SLIHGDHLTNVIITGYNGTIDGQGQMWWDLWW-NRTLKHT--RGHLVELMNSNNILISNL 82
SLI G + NV I G GTIDG +D WW + +K R + L N+LI +
Sbjct: 183 SLITGIGVENVNIIG-EGTIDGNSS--FDTWWHDAKVKRIAWRPRTIFLNKCKNVLIEGI 239
Query: 83 TFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVA 142
T +NSP WTIHP+ +N+ + I P +APNTDG+DP+S +V I GDD +A
Sbjct: 240 TIKNSPSWTIHPLLSQNLKFINLNIENPKDAPNTDGLDPESCKDVVILGTRFSVGDDCIA 299
Query: 143 VKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAG 202
+KSG + S N+ +R V IGSEMSGG+ NV VD+ G
Sbjct: 300 IKSGKLATSRKLPVSSENLYIRNCL-MEYGHGAVVIGSEMSGGVKNVHVDRCVFRKTDRG 358
Query: 203 VRIKTDKGRG--GYIENITIRNIKMERVKIPIRISR----GSNDHPDEGWDPKALP---- 252
+RIKT +GRG G I+ I NIKM++V P I+ + + W + LP
Sbjct: 359 IRIKTRRGRGSTGIIDEIHASNIKMDKVLTPFTINSFYFCDEDGKTEYVWSKEKLPVDDR 418
Query: 253 -KIRGISFVNVVSVNTTK--APVLAGIIGTQFEEICMKNVSL---LGLAPSAKWQCQFVS 306
G ++ ++ N T+ A + G+ + E++ M+N+ + L P FV
Sbjct: 419 TPYIGNIYLKDITCNDTQVAAGYMYGLPERKIEKVTMENIYIKFDLNAKPDYPEMLSFVD 478
Query: 307 GFTSQVFPL 315
F L
Sbjct: 479 EMCRNGFYL 487
>gi|404405418|ref|ZP_10997002.1| glycoside hydrolase family protein [Alistipes sp. JC136]
Length = 1278
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/284 (32%), Positives = 144/284 (50%), Gaps = 45/284 (15%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKHTR-------------------GH 67
LI+ TN+ +TG G IDG+G + W R + GH
Sbjct: 133 LIYAWQATNIAVTG-QGVIDGRGSHNFAHWKPRQKADQKALRRMGTDLVPVSDRLFGEGH 191
Query: 68 -----LVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
++E +N ++LI +TF +SPFW IHP+ C NV ++G+T+ + N DG DP+
Sbjct: 192 YLRPAMLEPVNCTDVLIEGVTFVDSPFWVIHPLACENVTVRGVTVDS--YNLNNDGCDPE 249
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S TNV IEDC +GDD +A+KSG D+ + RP+ N+++R S + +GV IGSE+
Sbjct: 250 SCTNVLIEDCTFRTGDDGIAIKSGRDNDAWRIGRPTENVLIRNCSFRS-KANGVCIGSEI 308
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKI------PIRISR 236
SGG+ NV V+ + + D G+ K++ RGGYIE++ + ++ + V+ P S
Sbjct: 309 SGGVRNVVVENVRMSDVGNGIYFKSNLDRGGYIEDVFVCGVEADSVRKTLVLFEPDYKSE 368
Query: 237 GSNDHPD-----------EGWDPKALPKIRGISFVNVVSVNTTK 269
+HP W KA IRG + + V V ++
Sbjct: 369 SRENHPTAFRGFVIEDVRAQWAGKAGIDIRGFADMPVRDVTISR 412
>gi|431703877|ref|ZP_19525103.1| glycosyl hydrolase [Enterococcus faecium E1904]
gi|430596723|gb|ELB34539.1| glycosyl hydrolase [Enterococcus faecium E1904]
Length = 436
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/217 (35%), Positives = 120/217 (55%), Gaps = 23/217 (10%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWWNRTLKH-TRGHLVE------------------LMNSN 75
+++I G G IDGQG WW+L+W + K TR + L ++
Sbjct: 103 DILIEG-KGIIDGQGDHWWELYWGKDQKSGTRAEYDQKGLRWIADYAIKRPRACLLYHAE 161
Query: 76 NILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIE 135
++++ +L F+ S FW + Y +V+++ + I+ + P+TDGID DSSTNV + +C +
Sbjct: 162 HVVVRDLIFQKSGFWNLQITYSNDVLVEKV-IIRNNDGPSTDGIDIDSSTNVRVYECDLA 220
Query: 136 SGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLH 195
GDD +A+KSG D G + R SS I V R + GV IGSE+S G+ +V + +
Sbjct: 221 CGDDCIAIKSGRDGNGARVNRKSSRIEVARCK--IRSGYGVTIGSEVSAGVSDVYIRDID 278
Query: 196 VWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPI 232
+ + G+R+K+ K RGG IENI + N+ M V+ P
Sbjct: 279 FFQSDCGIRMKSSKERGGVIENIRVENLNMIDVQFPF 315
>gi|293379024|ref|ZP_06625177.1| polygalacturonase (pectinase) [Enterococcus faecium PC4.1]
gi|292642303|gb|EFF60460.1| polygalacturonase (pectinase) [Enterococcus faecium PC4.1]
Length = 436
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 147/301 (48%), Gaps = 48/301 (15%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWWNRTLKH-------------------TRGHLVELMNSN 75
+++I G G IDGQG+ WW+L+W + K R L ++
Sbjct: 103 DILIEG-KGIIDGQGEHWWELYWGKDQKSGTRAEYDRKGLRWIADYAIKRPRACLLYHAE 161
Query: 76 NILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIE 135
+++I +L F+ S FW + Y +V+++ + I+ + P+TDGID DSST+V I +C +
Sbjct: 162 HVVIRDLIFQKSGFWNLQITYSNDVLVEKI-IIRHNDGPSTDGIDIDSSTDVRIYECDLA 220
Query: 136 SGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLH 195
GDD +A+KSG D G + R SS I + R + + GV IGSE+S G+ +V + +
Sbjct: 221 CGDDCIAIKSGRDGNGARVNRKSSRIEIARCN--IRSGYGVTIGSEVSAGVSDVYIHDID 278
Query: 196 VWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIR---------ISRGSNDHPD--E 244
+ + G+R+K+ + RGG IENI + N+ M V+ P + SND E
Sbjct: 279 FFQSDCGIRMKSSRKRGGVIENIRVENLNMMDVQFPFSWIMDWHNEYNRKNSNDLERMPE 338
Query: 245 GW--------DPKALPKIRGISFVNVVSVNTTKAPV------LAGIIGTQFEEICMKNVS 290
W + K + K+R I NV + + P+ L E++C + +
Sbjct: 339 SWQAVAEEIPESKQMTKVRNIHVKNVQASLSPGYPLPSRAFDLVAFPEKTIEDVCFTHCT 398
Query: 291 L 291
+
Sbjct: 399 I 399
>gi|336406856|ref|ZP_08587502.1| hypothetical protein HMPREF0127_04815 [Bacteroides sp. 1_1_30]
gi|335948529|gb|EGN10233.1| hypothetical protein HMPREF0127_04815 [Bacteroides sp. 1_1_30]
Length = 469
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/292 (31%), Positives = 142/292 (48%), Gaps = 50/292 (17%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQM--WWDLW---------------------------- 56
LI+ +N+ ITG G IDGQG M WW +
Sbjct: 141 LIYAYGESNIAITG-KGIIDGQGSMETWWPMCGAVKYGWKEGMVAQRNGGRERLLMYGET 199
Query: 57 ----WNRTLKHTRG---HLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILA 109
+ R +K G L+ L + + ILI +T NSPFW IHP++C ++++ G+T+
Sbjct: 200 LTPVYKRLMKPEDGMRPQLLNLHSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFN 259
Query: 110 PLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGT 169
PN DG DP+S NV IE+C ++GDD +A+KSG + G PS NIIVR
Sbjct: 260 --RGPNGDGCDPESCKNVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMR 317
Query: 170 TPTCSGVGIGSEMSGGIFNVTVD--QLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMER 227
GV IGSE+SGG N+ V+ ++ + +RIKT RGG IEN+ +RN+ + +
Sbjct: 318 NGH-GGVVIGSEISGGYRNLFVEDCRMDSPNLDRVIRIKTSTCRGGLIENVYVRNVTVGQ 376
Query: 228 VK---IPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGI 276
+ + I + + + G+D P +R + NV + ++ G+
Sbjct: 377 CREAVLRINLQYENREKCKRGFD----PIVRNVHLKNVTCEKSKLGVLIIGL 424
>gi|298482142|ref|ZP_07000330.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298271699|gb|EFI13272.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 469
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 143/292 (48%), Gaps = 50/292 (17%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQM--WWDL-------W--------------------- 56
LI+ +N+ ITG G IDGQG M WW + W
Sbjct: 141 LIYAYGESNIAITG-KGIIDGQGSMETWWPMCGAVKYGWKEGMVAQRNGGRERLLMYGET 199
Query: 57 ----WNRTLKHTRG---HLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILA 109
+ R +K G L+ L + + ILI +T NSPFW IHP++C ++++ G+T+
Sbjct: 200 STPVYKRLMKPEDGMRPQLLNLHSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFN 259
Query: 110 PLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGT 169
PN DG DP+S NV IE+C ++GDD +A+KSG + G PS NIIVR
Sbjct: 260 --RGPNGDGCDPESCKNVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMR 317
Query: 170 TPTCSGVGIGSEMSGGIFNVTVD--QLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMER 227
GV IGSE+SGG N+ V+ ++ + +RIKT RGG IEN+ +RN+ + +
Sbjct: 318 NGH-GGVVIGSEISGGYRNLFVEDCRMDSPNLDRVIRIKTSTCRGGLIENVYVRNVTVGQ 376
Query: 228 VK---IPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGI 276
+ + I + + + G+D P +R + NV + ++ G+
Sbjct: 377 CREAVLRINLQYENREKCKRGFD----PIVRNVHLKNVTCEKSKLGVLIIGL 424
>gi|383114434|ref|ZP_09935198.1| hypothetical protein BSGG_1394 [Bacteroides sp. D2]
gi|313693859|gb|EFS30694.1| hypothetical protein BSGG_1394 [Bacteroides sp. D2]
Length = 469
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/292 (31%), Positives = 142/292 (48%), Gaps = 50/292 (17%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQM--WWDLW---------------------------- 56
LI+ +N+ ITG G IDGQG M WW +
Sbjct: 141 LIYAYGESNIAITG-KGIIDGQGSMETWWPMCGAVKYGWKEGMVAQRNGGRERLLMYGET 199
Query: 57 ----WNRTLKHTRG---HLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILA 109
+ R +K G L+ L + + ILI +T NSPFW IHP++C ++++ G+T+
Sbjct: 200 STPVYKRLMKPEDGMRPQLLNLHSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFN 259
Query: 110 PLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGT 169
PN DG DP+S NV IE+C ++GDD +A+KSG + G PS NIIVR
Sbjct: 260 --RGPNGDGCDPESCKNVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMR 317
Query: 170 TPTCSGVGIGSEMSGGIFNVTVD--QLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMER 227
GV IGSE+SGG N+ V+ ++ + +RIKT RGG IEN+ +RN+ + +
Sbjct: 318 NGH-GGVVIGSEISGGYRNLFVEDCRMDSPNLDRVIRIKTSTCRGGLIENVYVRNVTVGQ 376
Query: 228 VK---IPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGI 276
+ + I + + + G+D P +R + NV + ++ G+
Sbjct: 377 CREAVLRINLQYENREKCKRGFD----PIVRNVHLKNVTCEKSKLGVLIIGL 424
>gi|293571115|ref|ZP_06682155.1| glycoside hydrolase, family 28 [Enterococcus faecium E980]
gi|430842918|ref|ZP_19460825.1| glycosyl hydrolase [Enterococcus faecium E1007]
gi|431064175|ref|ZP_19493522.1| glycosyl hydrolase [Enterococcus faecium E1604]
gi|431130293|ref|ZP_19498935.1| glycosyl hydrolase [Enterococcus faecium E1613]
gi|431739352|ref|ZP_19528287.1| glycosyl hydrolase [Enterococcus faecium E1972]
gi|431742389|ref|ZP_19531282.1| glycosyl hydrolase [Enterococcus faecium E2039]
gi|291608845|gb|EFF38127.1| glycoside hydrolase, family 28 [Enterococcus faecium E980]
gi|430492629|gb|ELA68993.1| glycosyl hydrolase [Enterococcus faecium E1007]
gi|430566194|gb|ELB05313.1| glycosyl hydrolase [Enterococcus faecium E1613]
gi|430568816|gb|ELB07846.1| glycosyl hydrolase [Enterococcus faecium E1604]
gi|430596080|gb|ELB33937.1| glycosyl hydrolase [Enterococcus faecium E1972]
gi|430600147|gb|ELB37805.1| glycosyl hydrolase [Enterococcus faecium E2039]
Length = 443
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 120/217 (55%), Gaps = 23/217 (10%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWWNRTLKH-------------------TRGHLVELMNSN 75
+++I G G IDGQG+ WW+L+W + K R L ++
Sbjct: 110 DILIEG-KGIIDGQGEHWWELYWGKDQKSGTRAEYDRKGLRWIADYAIKRPRACLLYHAE 168
Query: 76 NILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIE 135
+++I +L F+ S FW + Y +V+++ + I+ + P+TDGID DSST+V I +C +
Sbjct: 169 HVVIRDLIFQKSGFWNLQITYSNDVLVEKV-IIRHNDGPSTDGIDIDSSTDVRIYECDLA 227
Query: 136 SGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLH 195
GDD +A+KSG D G + R SS I + R + + GV IGSE+S GI +V + +
Sbjct: 228 CGDDCIAIKSGRDGNGARVNRKSSRIEIARCN--IRSGYGVTIGSEVSAGISDVYIHDID 285
Query: 196 VWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPI 232
+ + G+R+K+ + RGG IENI + N+ M V+ P
Sbjct: 286 FFQSDCGIRMKSSRERGGVIENIRVENLNMMDVQFPF 322
>gi|260642167|ref|ZP_05414737.2| putative exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii
DSM 17565]
gi|260623411|gb|EEX46282.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 469
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/292 (31%), Positives = 142/292 (48%), Gaps = 50/292 (17%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQM--WWDLW---------------------------- 56
LI+ +N+ ITG G IDGQG M WW +
Sbjct: 141 LIYAYGESNIAITG-KGIIDGQGSMETWWPMCGAVKYGWKEGMVAQRNGGRERLLMYGET 199
Query: 57 ----WNRTLKHTRG---HLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILA 109
+ R +K G L+ L + + ILI +T NSPFW IHP++C ++++ G+T+
Sbjct: 200 STPVYKRLMKPEDGMRPQLLNLHSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFN 259
Query: 110 PLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGT 169
PN DG DP+S NV IE+C ++GDD +A+KSG + G PS NIIVR
Sbjct: 260 --RGPNGDGCDPESCKNVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMR 317
Query: 170 TPTCSGVGIGSEMSGGIFNVTVD--QLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMER 227
GV IGSE+SGG N+ V+ ++ + +RIKT RGG IEN+ +RN+ + +
Sbjct: 318 NGH-GGVVIGSEISGGYRNLFVEDCRMDSPNLDRVIRIKTSTCRGGLIENVYVRNVTVGQ 376
Query: 228 VK---IPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGI 276
+ + I + + + G+D P +R + NV + ++ G+
Sbjct: 377 CREAVLRINLQYENREKCKRGFD----PIVRNVHLKNVTCEKSKLGVLIIGL 424
>gi|425055006|ref|ZP_18458501.1| polygalacturonase [Enterococcus faecium 505]
gi|403034856|gb|EJY46278.1| polygalacturonase [Enterococcus faecium 505]
Length = 436
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/217 (34%), Positives = 121/217 (55%), Gaps = 23/217 (10%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWWNRTLKH-------------------TRGHLVELMNSN 75
+++I G G IDGQG+ WW+L+W + K R L ++
Sbjct: 103 DILIEG-KGIIDGQGEHWWELYWGKDQKSGTRAEYDRKGLRWIADYAIKRPRACLLYHAE 161
Query: 76 NILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIE 135
+++I +L F+ S FW + Y +V+++ + I+ + P+TDGID DSST+V I +C +
Sbjct: 162 HVVIRDLIFQKSGFWNLQITYSNDVLVEKV-IIRHNDGPSTDGIDIDSSTDVRIYECDLA 220
Query: 136 SGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLH 195
GDD +A+KSG D G + R SS I + R + + GV IGSE+S G+ +V + ++
Sbjct: 221 CGDDCIAIKSGRDGNGARVNRKSSRIEIARCN--IRSGYGVTIGSEVSAGVSDVYIHDIN 278
Query: 196 VWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPI 232
+ + G+R+K+ + RGG IENI + N+ M V+ P
Sbjct: 279 FFQSDCGIRMKSSRERGGVIENIRVENLNMMDVQFPF 315
>gi|423294951|ref|ZP_17273078.1| hypothetical protein HMPREF1070_01743 [Bacteroides ovatus
CL03T12C18]
gi|392674531|gb|EIY67977.1| hypothetical protein HMPREF1070_01743 [Bacteroides ovatus
CL03T12C18]
Length = 469
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/292 (31%), Positives = 142/292 (48%), Gaps = 50/292 (17%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQM--WWDLW---------------------------- 56
LI+ +N+ ITG G IDGQG M WW +
Sbjct: 141 LIYAYGESNIAITG-KGIIDGQGSMETWWPMCGAVKYGWKEGMVAQRNGGRERLLMYGET 199
Query: 57 ----WNRTLKHTRG---HLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILA 109
+ R +K G L+ L + + ILI +T NSPFW IHP++C ++++ G+T+
Sbjct: 200 STPVYKRLMKPEDGMRPQLLNLHSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFN 259
Query: 110 PLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGT 169
PN DG DP+S NV IE+C ++GDD +A+KSG + G PS NIIVR
Sbjct: 260 --RGPNGDGCDPESCKNVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMR 317
Query: 170 TPTCSGVGIGSEMSGGIFNVTVD--QLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMER 227
GV IGSE+SGG N+ V+ ++ + +RIKT RGG IEN+ +RN+ + +
Sbjct: 318 NGH-GGVVIGSEISGGYRNLFVEDCRMDSPNLDRVIRIKTSTCRGGLIENVYVRNVTVGQ 376
Query: 228 VK---IPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGI 276
+ + I + + + G+D P +R + NV + ++ G+
Sbjct: 377 CREAVLRINLQYENREKCKRGFD----PIVRNVHLKNVTCEKSKLGVLIIGL 424
>gi|295086754|emb|CBK68277.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
Length = 459
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/292 (31%), Positives = 142/292 (48%), Gaps = 50/292 (17%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQM--WWDLW---------------------------- 56
LI+ +N+ ITG G IDGQG M WW +
Sbjct: 131 LIYAYGESNIAITG-KGIIDGQGSMETWWPMCGAVKYGWKEGMVAQRNGGRERLLMYGET 189
Query: 57 ----WNRTLKHTRG---HLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILA 109
+ R +K G L+ L + + ILI +T NSPFW IHP++C ++++ G+T+
Sbjct: 190 STPVYKRLMKPEDGMRPQLLNLHSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFN 249
Query: 110 PLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGT 169
PN DG DP+S NV IE+C ++GDD +A+KSG + G PS NIIVR
Sbjct: 250 --RGPNGDGCDPESCKNVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMR 307
Query: 170 TPTCSGVGIGSEMSGGIFNVTVD--QLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMER 227
GV IGSE+SGG N+ V+ ++ + +RIKT RGG IEN+ +RN+ + +
Sbjct: 308 NGH-GGVVIGSEISGGYRNLFVEDCRMDSPNLDRVIRIKTSTCRGGLIENVYVRNVTVGQ 366
Query: 228 VK---IPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGI 276
+ + I + + + G+D P +R + NV + ++ G+
Sbjct: 367 CREAVLRINLQYENREKCKRGFD----PIVRNVHLKNVTCEKSKLGVLIIGL 414
>gi|257900361|ref|ZP_05680014.1| glycoside hydrolase [Enterococcus faecium Com15]
gi|257838273|gb|EEV63347.1| glycoside hydrolase [Enterococcus faecium Com15]
Length = 412
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 120/217 (55%), Gaps = 23/217 (10%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWWNRTLKH-------------------TRGHLVELMNSN 75
+++I G G IDGQG+ WW+L+W + K R L ++
Sbjct: 79 DILIEG-KGIIDGQGEHWWELYWGKDQKSGTRAEYDRKGLRWIADYAIKRPRACLLYHAE 137
Query: 76 NILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIE 135
+++I +L F+ S FW + Y +V+++ + I+ + P+TDGID DSST+V I +C +
Sbjct: 138 HVVIRDLIFQKSGFWNLQITYSNDVLVEKV-IIRHNDGPSTDGIDIDSSTDVRIYECDLA 196
Query: 136 SGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLH 195
GDD +A+KSG D G + R SS I + R + + GV IGSE+S GI +V + +
Sbjct: 197 CGDDCIAIKSGRDGNGARVNRKSSRIEIARCN--IRSGYGVTIGSEVSAGISDVYIHDID 254
Query: 196 VWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPI 232
+ + G+R+K+ + RGG IENI + N+ M V+ P
Sbjct: 255 FFQSDCGIRMKSSRERGGVIENIRVENLNMMDVQFPF 291
>gi|424764550|ref|ZP_18191970.1| polygalacturonase [Enterococcus faecium TX1337RF]
gi|431050708|ref|ZP_19493377.1| glycosyl hydrolase [Enterococcus faecium E1590]
gi|431764023|ref|ZP_19552569.1| glycosyl hydrolase [Enterococcus faecium E3548]
gi|402419033|gb|EJV51317.1| polygalacturonase [Enterococcus faecium TX1337RF]
gi|430560246|gb|ELA99550.1| glycosyl hydrolase [Enterococcus faecium E1590]
gi|430621327|gb|ELB58094.1| glycosyl hydrolase [Enterococcus faecium E3548]
Length = 436
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 147/301 (48%), Gaps = 48/301 (15%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWWNRTLKH-------------------TRGHLVELMNSN 75
+++I G G IDGQG+ WW+L+W + K R L ++
Sbjct: 103 DILIEG-KGIIDGQGEHWWELYWGKDQKSGTRAEYDRKGLRWIADYAIKRPRACLLYHAE 161
Query: 76 NILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIE 135
+++I +L F+ S FW + Y +V+++ + I+ + P+TDGID DSST+V I +C +
Sbjct: 162 HVVIRDLIFQKSGFWNLQITYSNDVLVEKI-IIRHNDGPSTDGIDIDSSTDVRIYECDLA 220
Query: 136 SGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLH 195
GDD +A+KSG D G + R SS I + R + + GV IGSE+S G+ +V + +
Sbjct: 221 CGDDCIAIKSGRDGNGARVNRKSSRIEIARCN--IRSGYGVTIGSEVSAGVSDVYIHDID 278
Query: 196 VWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIR---------ISRGSNDHPD--E 244
+ + G+R+K+ + RGG IENI + N+ M V+ P + SND E
Sbjct: 279 FFQSDCGIRMKSSRERGGVIENIRVENLNMMDVQFPFSWIMDWHNEYNRKNSNDLERMPE 338
Query: 245 GW--------DPKALPKIRGISFVNVVSVNTTKAPV------LAGIIGTQFEEICMKNVS 290
W + K + K+R I NV + + P+ L E++C + +
Sbjct: 339 SWQAVAEEIPESKQMTKVRNIHVKNVQASLSPGYPLPSRAFDLVAFPEKTIEDVCFTHCT 398
Query: 291 L 291
+
Sbjct: 399 I 399
>gi|431758794|ref|ZP_19547417.1| glycosyl hydrolase [Enterococcus faecium E3083]
gi|430616609|gb|ELB53505.1| glycosyl hydrolase [Enterococcus faecium E3083]
Length = 436
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 147/301 (48%), Gaps = 48/301 (15%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWWNRTLKH-------------------TRGHLVELMNSN 75
+++I G G IDGQG+ WW+L+W + K R L ++
Sbjct: 103 DILIEG-KGIIDGQGEHWWELYWGKDQKSGTRAEYDRKVLRWIADYAIKRPRACLLYHAE 161
Query: 76 NILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIE 135
+++I +L F+ S FW + Y +V+++ + I+ + P+TDGID DSST+V I +C +
Sbjct: 162 HVVIRDLIFQKSGFWNLQITYSNDVLVEKI-IIRHNDGPSTDGIDIDSSTDVRIYECDLA 220
Query: 136 SGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLH 195
GDD +A+KSG D G + R SS I + R + + GV IGSE+S G+ +V + +
Sbjct: 221 CGDDCIAIKSGRDGNGARVNRKSSRIEIARCN--IRSGYGVTIGSEVSAGVSDVYIHDID 278
Query: 196 VWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIR---------ISRGSNDHPD--E 244
+ + G+R+K+ + RGG IENI + N+ M V+ P + SND E
Sbjct: 279 FFQSDCGIRMKSSRERGGVIENIRVENLNMMDVQFPFSWIMDWHNEYNRKNSNDLERMPE 338
Query: 245 GW--------DPKALPKIRGISFVNVVSVNTTKAPV------LAGIIGTQFEEICMKNVS 290
W + K + K+R I NV + + P+ L E++C + +
Sbjct: 339 SWQAVAEEIPESKQMTKVRNIHVKNVQASLSPGYPLPSRAFDLVAFPEKTIEDVCFTHCT 398
Query: 291 L 291
+
Sbjct: 399 I 399
>gi|257889043|ref|ZP_05668696.1| glycoside hydrolase [Enterococcus faecium 1,141,733]
gi|257825106|gb|EEV52029.1| glycoside hydrolase [Enterococcus faecium 1,141,733]
Length = 412
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 147/301 (48%), Gaps = 48/301 (15%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWWNRTLKH-------------------TRGHLVELMNSN 75
+++I G G IDGQG+ WW+L+W + K R L ++
Sbjct: 79 DILIEG-KGIIDGQGEHWWELYWGKDQKSGTRAEYDRKGLRWIADYAIKRPRACLLYHAE 137
Query: 76 NILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIE 135
+++I +L F+ S FW + Y +V+++ + I+ + P+TDGID DSST+V I +C +
Sbjct: 138 HVVIRDLIFQKSGFWNLQITYSNDVLVEKI-IIRHNDGPSTDGIDIDSSTDVRIYECDLA 196
Query: 136 SGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLH 195
GDD +A+KSG D G + R SS I + R + + GV IGSE+S G+ +V + +
Sbjct: 197 CGDDCIAIKSGRDGNGARVNRKSSRIEIARCN--IRSGYGVTIGSEVSAGVSDVYIHDID 254
Query: 196 VWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIR---------ISRGSND--HPDE 244
+ + G+R+K+ + RGG IENI + N+ M V+ P + SND E
Sbjct: 255 FFQSDCGIRMKSSRERGGVIENIRVENLNMMDVQFPFSWIMDWHNEYNRKNSNDLERMPE 314
Query: 245 GW--------DPKALPKIRGISFVNVVSVNTTKAPV------LAGIIGTQFEEICMKNVS 290
W + K + K+R I NV + + P+ L E++C + +
Sbjct: 315 SWQAVAEEIPESKQMTKVRNIHVKNVQASLSPGYPLPSRAFDLVAFPEKTIEDVCFTHCT 374
Query: 291 L 291
+
Sbjct: 375 I 375
>gi|299148506|ref|ZP_07041568.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
gi|423288903|ref|ZP_17267754.1| hypothetical protein HMPREF1069_02797 [Bacteroides ovatus
CL02T12C04]
gi|298513267|gb|EFI37154.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
gi|392668993|gb|EIY62485.1| hypothetical protein HMPREF1069_02797 [Bacteroides ovatus
CL02T12C04]
Length = 469
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/292 (31%), Positives = 142/292 (48%), Gaps = 50/292 (17%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQM--WWDLW---------------------------- 56
LI+ +N+ ITG G IDGQG M WW +
Sbjct: 141 LIYAYGESNIAITG-KGIIDGQGSMETWWPMCGAVKYGWKEGMVAQRNGGRERLLMYGET 199
Query: 57 ----WNRTLKHTRG---HLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILA 109
+ R +K G L+ L + + ILI +T NSPFW IHP++C ++++ G+T+
Sbjct: 200 STPVYKRLMKPEDGMRPQLLNLHSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFN 259
Query: 110 PLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGT 169
PN DG DP+S NV IE+C ++GDD +A+KSG + G PS NIIVR
Sbjct: 260 --RGPNGDGCDPESCKNVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMR 317
Query: 170 TPTCSGVGIGSEMSGGIFNVTVD--QLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMER 227
GV IGSE+SGG N+ V+ ++ + +RIKT RGG IEN+ +RN+ + +
Sbjct: 318 NGH-GGVVIGSEISGGYRNLFVEDCRMDSPNLDRVIRIKTSTCRGGLIENVFVRNVTVGQ 376
Query: 228 VK---IPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGI 276
+ + I + + + G+D P +R + NV + ++ G+
Sbjct: 377 CREAVLRINLQYENREKCKRGFD----PIVRNVHLKNVTCEKSKLGVLIIGL 424
>gi|336414764|ref|ZP_08595108.1| hypothetical protein HMPREF1017_02216 [Bacteroides ovatus
3_8_47FAA]
gi|335942134|gb|EGN03982.1| hypothetical protein HMPREF1017_02216 [Bacteroides ovatus
3_8_47FAA]
Length = 469
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/292 (31%), Positives = 142/292 (48%), Gaps = 50/292 (17%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQM--WWDLW---------------------------- 56
LI+ +N+ ITG G IDGQG M WW +
Sbjct: 141 LIYAYGESNIAITG-KGIIDGQGSMETWWPMCGAVKYGWKEGMVAQRNGGRERLLMYGET 199
Query: 57 ----WNRTLKHTRG---HLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILA 109
+ R +K G L+ L + + ILI +T NSPFW IHP++C ++++ G+T+
Sbjct: 200 STPVYKRLMKPEDGMRPQLLNLHSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFN 259
Query: 110 PLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGT 169
PN DG DP+S NV IE+C ++GDD +A+KSG + G PS NIIVR
Sbjct: 260 --RGPNGDGCDPESCKNVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMR 317
Query: 170 TPTCSGVGIGSEMSGGIFNVTVD--QLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMER 227
GV IGSE+SGG N+ V+ ++ + +RIKT RGG IEN+ +RN+ + +
Sbjct: 318 NGH-GGVVIGSEISGGYRNLFVEDCRMDSPNLDRVIRIKTSTCRGGLIENVFVRNVTVGQ 376
Query: 228 VK---IPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGI 276
+ + I + + + G+D P +R + NV + ++ G+
Sbjct: 377 CREAVLRINLQYENREKCKRGFD----PIVRNVHLKNVTCEKSKLGVLIIGL 424
>gi|431753628|ref|ZP_19542297.1| glycosyl hydrolase [Enterococcus faecium E2620]
gi|430611661|gb|ELB48738.1| glycosyl hydrolase [Enterococcus faecium E2620]
Length = 436
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 147/301 (48%), Gaps = 48/301 (15%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWWNRTLKH-------------------TRGHLVELMNSN 75
+++I G G IDGQG+ WW+L+W + K R L ++
Sbjct: 103 HILIEG-KGIIDGQGEHWWELYWGKDQKSGTRAEYDRKGLCWIADYAIKRPRACLLYHAE 161
Query: 76 NILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIE 135
+++I +L F+ S FW + Y +V+++ + I+ + P+TDGID DSST+V I +C +
Sbjct: 162 HVVIRDLIFQKSGFWNLQITYSNDVLVEKI-IIRHNDGPSTDGIDIDSSTDVRIYECDLA 220
Query: 136 SGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLH 195
GDD +A+KSG D G + R SS I + R + + GV IGSE+S G+ +V + +
Sbjct: 221 CGDDCIAIKSGRDGNGARVNRKSSRIEIARCN--IRSGYGVTIGSEVSAGVSDVYIHDID 278
Query: 196 VWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIR---------ISRGSNDHPD--E 244
+ + G+R+K+ + RGG IENI + N+ M V+ P + SND E
Sbjct: 279 FFQSDCGIRMKSSRERGGVIENIRVENLNMMDVQFPFSWIMDWHNEYNRKNSNDLERMPE 338
Query: 245 GW--------DPKALPKIRGISFVNVVSVNTTKAPV------LAGIIGTQFEEICMKNVS 290
W + K + K+R I NV + + P+ L E++C + +
Sbjct: 339 SWQAVAEEIPESKQMTKVRNIHVKNVQASLSPGYPLPSRAFDLVAFPEKTIEDVCFTHCT 398
Query: 291 L 291
+
Sbjct: 399 I 399
>gi|227329691|ref|ZP_03833715.1| putative polygalacturonase [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 460
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 119/211 (56%), Gaps = 24/211 (11%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWWNRTLKHT-------RGHLVELMNSNNILISNLTFRNS 87
NV ITG GTIDGQG +WW+ W ++ T R L+ + +SNN+L+ +T +S
Sbjct: 135 NVAITG-QGTIDGQGAVWWE-RWRENIRATGKKGGTDRPRLIYIKSSNNVLVDGVTLTHS 192
Query: 88 PFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGW 147
P + + Y +V + G IL+P +APNTD IDP S N+ I + YI+ DD +A+K+
Sbjct: 193 PSFHVVMRYSHDVDVNGTRILSPWHAPNTDAIDPIDSQNIRITNNYIDCNDDHIAIKA-- 250
Query: 148 DHYGIAMARPSS---NIIVRRV---SGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAA 201
+P S N +V + + G+ IGSE SGG+ NV V+ +
Sbjct: 251 -------EKPDSRFPNGVVDNIYIANNILKQGRGISIGSETSGGVNNVLVENNQFEGSMY 303
Query: 202 GVRIKTDKGRGGYIENITIRNIKMERVKIPI 232
G+RIKT +G+GG ++NIT RN KM V+IP+
Sbjct: 304 GIRIKTLRGKGGEVKNITYRNTKMVDVEIPL 334
>gi|433656005|ref|YP_007299713.1| endopolygalacturonase [Thermoanaerobacterium thermosaccharolyticum
M0795]
gi|433294194|gb|AGB20016.1| endopolygalacturonase [Thermoanaerobacterium thermosaccharolyticum
M0795]
Length = 519
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/282 (34%), Positives = 143/282 (50%), Gaps = 20/282 (7%)
Query: 26 SLIHGDHLTNVIITGYNGTIDGQGQMWWDLWW-NRTLKHT--RGHLVELMNSNNILISNL 82
SLI G + NV I G GTIDG +D WW + +K R + L N+LI +
Sbjct: 183 SLITGIGVENVNIIG-EGTIDGNSS--FDTWWHDAKVKRIAWRPRTIFLNKCKNVLIEGI 239
Query: 83 TFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVA 142
T +NSP WTIHP+ +N+ + I P +APNTDG+DP+S +V I GDD +A
Sbjct: 240 TIKNSPSWTIHPLLSQNLKFINLNIENPKDAPNTDGLDPESCKDVVILGTRFSVGDDCIA 299
Query: 143 VKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAG 202
+KSG + S N+ +R V IGSEMSGG+ NV VD+ G
Sbjct: 300 IKSGKLATSRKLPVSSENLYIRNCL-MEYGHGAVVIGSEMSGGVKNVHVDRCVFRKTDRG 358
Query: 203 VRIKTDKGRG--GYIENITIRNIKMERVKIPIRISR----GSNDHPDEGWDPKALP---- 252
+RIKT +GRG G I+ I NIKM++V P I+ ++ + W + LP
Sbjct: 359 IRIKTRRGRGSTGIIDEIHASNIKMDKVLTPFTINSFYFCDADGKTEYVWSKEKLPVDDR 418
Query: 253 -KIRGISFVNVVSVNTTK--APVLAGIIGTQFEEICMKNVSL 291
G ++ ++ N T+ A + G+ + E++ M+N+ +
Sbjct: 419 TPYIGNIYLKDITCNDTQVAAGYMYGLPERKIEKVTMENIYI 460
>gi|332715898|ref|YP_004443364.1| polygalacturonase-like protein [Agrobacterium sp. H13-3]
gi|325062583|gb|ADY66273.1| polygalacturonase-like protein [Agrobacterium sp. H13-3]
Length = 531
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 146/298 (48%), Gaps = 41/298 (13%)
Query: 28 IHGDHLTNVIITGYNGTIDGQGQM--WWDLWWNRT---LKHTRGHLVELMNSNNILISNL 82
+H N++I G G +DG G WW W T + RG + L++ N+ +
Sbjct: 195 VHAIGADNLVIEG-TGVLDGSGDRGDWWS-WPKETRDGARRPRG--LHLVSCRNVGLFGF 250
Query: 83 TFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVA 142
T RN+P WT+HP C + G+TI AP N+PNTDG +P+S NV I GDD +A
Sbjct: 251 TIRNAPSWTVHPQGCETLKAAGLTISAPHNSPNTDGFNPESCRNVTISGVRFSVGDDCIA 310
Query: 143 VKSGW-------DHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLH 195
VK+G DH + ++ R G G+ IGSEMSGG+ +VTV+
Sbjct: 311 VKAGKRGPNGEDDHLAETRGVSVRHCLMERGHG------GLVIGSEMSGGVHDVTVEDCD 364
Query: 196 VWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPD----EGW----D 247
+ G+R+KT +GRGG + NIT+R + ++ V +S ++ H D +GW D
Sbjct: 365 MVGTDRGLRLKTRRGRGGSVSNITMRRVLLDGVHTA--LSANAHYHCDADGHDGWVQSRD 422
Query: 248 PKALPKIRGISFVNVVSVNTTK-------APVLAGIIGTQFEEICMKNVSLLGLAPSA 298
P P G F++ ++V + A V G+ I ++N++++ P A
Sbjct: 423 PA--PVDDGTPFIDGITVEDVEIRHLAHAAGVFLGLPEAPIRNIAIRNLTIVSHDPVA 478
>gi|397691340|ref|YP_006528594.1| exo-poly-alpha-D-galacturonosidase [Melioribacter roseus P3M]
gi|395812832|gb|AFN75581.1| exo-poly-alpha-D-galacturonosidase [Melioribacter roseus P3M]
Length = 495
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 103/358 (28%), Positives = 161/358 (44%), Gaps = 74/358 (20%)
Query: 1 MDEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMW-------- 52
D++P++ L +Y G E+ R S I G +L N+ ITGY G IDG G W
Sbjct: 57 FDDYPLV--LTTY-EGTEQY--RCQSPISGWNLENIAITGY-GVIDGGGDAWRYVKKSKL 110
Query: 53 ----W-------------DLWW---------------------------NRTLKHTRGHL 68
W + WW + + R +
Sbjct: 111 TESQWKKLVSSGGVVDKKNQWWPSEQAMNGQRILDSLLEANGELTKEDYRKVRDYLRPVM 170
Query: 69 VELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVC 128
V L+ NIL+ +TF+NSP W IHP+ N+++K +T+ P + N DGID +S NV
Sbjct: 171 VNLVKCKNILLEGVTFQNSPAWNIHPLMSENIILKNVTVRNPWYSQNGDGIDVESCKNVV 230
Query: 129 IEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFN 188
I DC + GDD + +KSG + +G P+ N+I+ G IGSEMSGG+ N
Sbjct: 231 IYDCKFDVGDDAICMKSGKNEFGRKRGIPTENVIIADCI-VYHGHGGFTIGSEMSGGVRN 289
Query: 189 VTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERV---KIPIRISRG----SNDH 241
+ V + G+R K+ +GRGG +ENI I NI M+ + + + G + D
Sbjct: 290 IKVTNCNFIGTDIGLRFKSTRGRGGVVENIYIDNIYMKDIPTEALSFNMYYGGQAPTEDI 349
Query: 242 P--DEGWDPKAL------PKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 291
P ++ + K L P+ R I ++ + A ++ G+ + + I + NV +
Sbjct: 350 PLAEKLKNRKVLNVDETTPQFRNIFLNDIYCIGAEDAVIIQGLPEMKIKNIVLNNVVM 407
>gi|412993465|emb|CCO13976.1| predicted protein [Bathycoccus prasinos]
Length = 635
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 146/295 (49%), Gaps = 23/295 (7%)
Query: 26 SLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK---HTRGH---LVELMNSNNILI 79
+ IH + TN+ I+G GTI+G G WWD ++ + H LV L+ +++ I
Sbjct: 291 AFIHAYNQTNIEISG-GGTINGHGDFWWDRKTDQKYSPSMRKKAHVPNLVHLVGCSDVKI 349
Query: 80 SNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGD- 138
N+ NSP +T+ P YC V + + I P N+P T+G+ DS++N + D +I +GD
Sbjct: 350 ENIVLTNSPHFTVRPQYCNKVSVSRIHISNPANSPGTNGVVFDSTSNSFLRDSFITTGDK 409
Query: 139 -DLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFN-----VTVD 192
D VA+KSG D++G PS NI V V T + +GSEMSGG+ N +T D
Sbjct: 410 EDAVAIKSGKDYHGRKANVPSKNIRVEHV--TILGGHALSVGSEMSGGVSNIIFSDITFD 467
Query: 193 QLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDP---K 249
+ R+KT +GRGG ++ IT +NI+ + + + D P +
Sbjct: 468 GRNNKFGVGSARVKTMRGRGGVVDQITFQNIRGWNALYALELYEYYSKQ-DTNVGPVSRE 526
Query: 250 ALPKIRGISFVNV-VSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQCQ 303
P ++ I+F NV + A V+AG+ + ++NV L + W C
Sbjct: 527 ETPIVKNINFKNVHIEGIKRYAGVIAGLPEMAVSNLVIENVHLTNVHKG--WNCH 579
>gi|160887001|ref|ZP_02068004.1| hypothetical protein BACOVA_05015 [Bacteroides ovatus ATCC 8483]
gi|293369359|ref|ZP_06615944.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|156107412|gb|EDO09157.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|292635526|gb|EFF54033.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
Length = 469
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 142/292 (48%), Gaps = 50/292 (17%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQM--WWDLW---------------------------- 56
LI+ +N+ ITG G IDGQG M WW +
Sbjct: 141 LIYAYGESNIAITG-KGIIDGQGSMETWWPMCGAVKYGWKEGMVAQRNGGRERLLMYGET 199
Query: 57 ----WNRTLKHTRG---HLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILA 109
+ R ++ G L+ L + + ILI +T NSPFW IHP++C ++++ G+T+
Sbjct: 200 STPVYKRLMRPEDGMRPQLLNLHSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFN 259
Query: 110 PLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGT 169
PN DG DP+S NV IE+C ++GDD +A+KSG + G PS NIIVR
Sbjct: 260 --RGPNGDGCDPESCKNVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMK 317
Query: 170 TPTCSGVGIGSEMSGGIFNVTVD--QLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMER 227
GV IGSE+SGG N+ V+ ++ + +RIKT RGG IEN+ +RN+ + +
Sbjct: 318 NGH-GGVVIGSEISGGYRNLFVEDCRMDSPNLDRVIRIKTSTCRGGLIENVYVRNVTVGQ 376
Query: 228 VK---IPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGI 276
+ + I + + + G+D P +R + NV + ++ G+
Sbjct: 377 CREAVLRINLQYENREKCKRGFD----PIVRNVHLKNVTCEKSKLGVLIIGL 424
>gi|15893646|ref|NP_346995.1| polygalacturonase [Clostridium acetobutylicum ATCC 824]
gi|337735568|ref|YP_004635015.1| polygalacturonase [Clostridium acetobutylicum DSM 1731]
gi|384457079|ref|YP_005669499.1| Putative polygalacturonase (pectinase) [Clostridium acetobutylicum
EA 2018]
gi|15023202|gb|AAK78335.1|AE007550_2 Putative polygalacturonase (pectinase) [Clostridium acetobutylicum
ATCC 824]
gi|325507768|gb|ADZ19404.1| Putative polygalacturonase (pectinase) [Clostridium acetobutylicum
EA 2018]
gi|336292627|gb|AEI33761.1| putative polygalacturonase (pectinase) [Clostridium acetobutylicum
DSM 1731]
Length = 513
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 98/282 (34%), Positives = 143/282 (50%), Gaps = 20/282 (7%)
Query: 26 SLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKHT---RGHLVELMNSNNILISNL 82
SLI ++ NV I G GTIDG +D WW + + R + L NIL+ +
Sbjct: 182 SLITAINVENVNIIG-KGTIDGNSD--FDTWWFKAKEKRIAWRPRTLFLNACKNILVEGV 238
Query: 83 TFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVA 142
T +NSP WTIHP+ ++ ++I P NAPNTD +DP+S NV I GDD +A
Sbjct: 239 TIKNSPSWTIHPLMSDHLKFINLSIENPFNAPNTDALDPESCKNVLILGDTFSVGDDCIA 298
Query: 143 VKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAG 202
+KSG S NI +R + + V +GSEMS G+ ++ +++ G
Sbjct: 299 IKSGKIDISKKNPVSSENINIRNCNMRSGH-GAVVLGSEMSSGLKSIFIEKCIFNATDRG 357
Query: 203 VRIKTDKGRG--GYIENITIRNIKMERVKIPIRISR----GSNDHPDEGWDPKALP---K 253
+RIKT +GRG G I+NI ++NIKM++V P I+ + + W + LP K
Sbjct: 358 LRIKTRRGRGSKGIIDNIHMKNIKMDKVLTPFSINSFYFCDDDGKTEYVWSKEKLPVDDK 417
Query: 254 IRGISFVNVVSVNTTKAPVLA----GIIGTQFEEICMKNVSL 291
I + V V T A V A G+ + E++ MKNVS+
Sbjct: 418 TPYIGSIYVEDVTCTNAHVCAAFMYGLPEQKIEKVSMKNVSV 459
>gi|227550317|ref|ZP_03980366.1| pectin lyase [Enterococcus faecium TX1330]
gi|227180577|gb|EEI61549.1| pectin lyase [Enterococcus faecium TX1330]
Length = 436
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 146/301 (48%), Gaps = 48/301 (15%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWWNRTLKH-------------------TRGHLVELMNSN 75
+++I G G IDGQG+ WW+L+W K R L ++
Sbjct: 103 DILIEG-KGIIDGQGEHWWELYWGEDQKSGTRAEYDRKGLRWIADYAIKRPRACLLYHAE 161
Query: 76 NILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIE 135
+++I +L F+ S FW + Y +V+++ + I+ + P+TDGID DSST+V I +C +
Sbjct: 162 HVVIRDLIFQKSGFWNLQITYSNDVLVEKI-IIRHNDGPSTDGIDIDSSTDVRIYECDLA 220
Query: 136 SGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLH 195
GDD +A+KSG D G + R SS I + R + + GV IGSE+S G+ +V + +
Sbjct: 221 CGDDCIAIKSGRDGNGARVNRKSSRIEIARCN--IRSGYGVTIGSEVSAGVSDVYIHDID 278
Query: 196 VWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIR---------ISRGSNDHPD--E 244
+ + G+R+K+ + RGG IENI + N+ M V+ P + SND E
Sbjct: 279 FFQSDCGIRMKSSRERGGVIENIRVENLNMMDVQFPFSWIMDWHNEYNRKNSNDLERMPE 338
Query: 245 GW--------DPKALPKIRGISFVNVVSVNTTKAPV------LAGIIGTQFEEICMKNVS 290
W + K + K+R I NV + + P+ L E++C + +
Sbjct: 339 SWQAVAEEIPESKQMTKVRNIHVKNVQASLSPGYPLPSRAFDLVAFPEKTIEDVCFTHCT 398
Query: 291 L 291
+
Sbjct: 399 I 399
>gi|257897638|ref|ZP_05677291.1| glycoside hydrolase [Enterococcus faecium Com12]
gi|257834203|gb|EEV60624.1| glycoside hydrolase [Enterococcus faecium Com12]
Length = 412
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 146/301 (48%), Gaps = 48/301 (15%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWWNRTLKH-------------------TRGHLVELMNSN 75
+++I G G IDGQG+ WW+L+W K R L ++
Sbjct: 79 DILIEG-KGIIDGQGEHWWELYWGEDQKSGTRAEYDRKGLRWIADYAIKRPRACLLYHAE 137
Query: 76 NILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIE 135
+++I +L F+ S FW + Y +V+++ + I+ + P+TDGID DSST+V I +C +
Sbjct: 138 HVVIRDLIFQKSGFWNLQITYSNDVLVEKI-IIRHNDGPSTDGIDIDSSTDVRIYECDLA 196
Query: 136 SGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLH 195
GDD +A+KSG D G + R SS I + R + + GV IGSE+S G+ +V + +
Sbjct: 197 CGDDCIAIKSGRDGNGARVNRKSSRIEIARCN--IRSGYGVTIGSEVSAGVSDVYIHDID 254
Query: 196 VWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIR---------ISRGSNDHPD--E 244
+ + G+R+K+ + RGG IENI + N+ M V+ P + SND E
Sbjct: 255 FFQSDCGIRMKSSRERGGVIENIRVENLNMMDVQFPFSWIMDWHNEYNRKNSNDLERMPE 314
Query: 245 GW--------DPKALPKIRGISFVNVVSVNTTKAPV------LAGIIGTQFEEICMKNVS 290
W + K + K+R I NV + + P+ L E++C + +
Sbjct: 315 SWQAVAEEIPESKQMTKVRNIHVKNVQASLSPGYPLPSRAFDLVAFPEKTIEDVCFTHCT 374
Query: 291 L 291
+
Sbjct: 375 I 375
>gi|29346428|ref|NP_809931.1| polygalacturonase (Pectinase) [Bacteroides thetaiotaomicron
VPI-5482]
gi|29338324|gb|AAO76125.1| polygalacturonase (Pectinase) [Bacteroides thetaiotaomicron
VPI-5482]
Length = 445
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 152/320 (47%), Gaps = 51/320 (15%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWW--------DLWWN-------------------- 58
LI+ N+ I G GT+DGQG+ WW DL N
Sbjct: 114 LIYAVDAENITIKG-EGTLDGQGKKWWMEFFRVMIDLKDNGMRDINKYQPMWDAQNDTTA 172
Query: 59 ----------RTLKHT--RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMT 106
TL+ R ++ + + I + NSPFWT++P +C NV IKG+T
Sbjct: 173 IYAETNKDYVSTLQRRFFRPPFIQPVRCKKVKIEGVKIVNSPFWTVNPEFCDNVTIKGIT 232
Query: 107 ILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRV 166
I + +PNTDGI+P+S NV I DC+I GDD + +KSG D + P NI +
Sbjct: 233 I-NNVPSPNTDGINPESCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNC 291
Query: 167 SGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKME 226
+ + GV IGSEMSG + VT+ G+RIK+ +GRGG +E+I + NI M
Sbjct: 292 TMLSGH-GGVVIGSEMSGSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNIVMS 350
Query: 227 RVKI-PIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPV-LAGIIGTQFEEI 284
+K + ++ + P E + P R + ++ ++V K P+ + G+ +I
Sbjct: 351 NIKQEAVVLNLKYSQMPAEAKSERT-PIFRNVH-ISGMTVTDVKTPIKIVGLEEAPISDI 408
Query: 285 CMKNVSLLGLAPSAKWQCQF 304
++++ + G A+ +C F
Sbjct: 409 VLRDIHIQG----ARQKCIF 424
>gi|397691596|ref|YP_006528850.1| glycoside hydrolase family 28 [Melioribacter roseus P3M]
gi|395813088|gb|AFN75837.1| glycoside hydrolase family 28 [Melioribacter roseus P3M]
Length = 463
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 96/311 (30%), Positives = 145/311 (46%), Gaps = 54/311 (17%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQG--QMWWDLWWNRTLK---------------------- 62
LI+G + NV ITG G DG + WW + K
Sbjct: 139 LIYGFEVDNVAITG-EGVFDGMASDENWWKWKGRKNPKDDETQNNPNSRPRLFEMNNQDV 197
Query: 63 -----------HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPL 111
+ R + V+ S NILI +TF+NSP W +HPV N++I+ + +
Sbjct: 198 PVDKRVFGEGHYLRPNFVQFYKSKNILIEGVTFKNSPMWFLHPVLSENIIIRNVKTIG-- 255
Query: 112 NAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTP 171
+ PN DG DP+S NV IE CY ++GDD +A+KSG ++ G + PS NII+R +
Sbjct: 256 HGPNNDGCDPESCKNVLIEGCYFDNGDDCIAIKSGRNNDGRRINAPSENIIIRNCT-MKD 314
Query: 172 TCSGVGIGSEMSGGIFNVTVDQ--LHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVK 229
GV IGSE+SGG V ++ + + +RIK++ RGG +E++ +RNI++ V
Sbjct: 315 GHGGVVIGSEISGGCRFVFAEECKMDSPNLDRMLRIKSNTVRGGVVEHVYVRNIEVGEVS 374
Query: 230 IPIRISRGSNDHPDEGWDPKAL------PKIRGISFVNVVSVNTTKAPVLAGIIGTQFEE 283
I + +DPK + PK R I NV S + A G+ + E
Sbjct: 375 NAIV-------RMNMFYDPKEIGPRDFPPKFRNIRVENVTSRKSDYALEFLGLEESPIEN 427
Query: 284 ICMKNVSLLGL 294
+ + N G+
Sbjct: 428 VEIINCDFNGV 438
>gi|146301992|ref|YP_001196583.1| glycoside hydrolase [Flavobacterium johnsoniae UW101]
gi|146156410|gb|ABQ07264.1| Candidate polygalacturonase; Glycoside hydrolase family 28
[Flavobacterium johnsoniae UW101]
Length = 475
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/235 (35%), Positives = 134/235 (57%), Gaps = 11/235 (4%)
Query: 62 KHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDP 121
++ R + +E N +L+ ++T NSPFW +HP+ N++I G+T+ + + PN DG DP
Sbjct: 219 RYLRPNFIEFFECNTVLVKDITVINSPFWILHPIKTNNMIIDGVTVNS--HGPNNDGCDP 276
Query: 122 DSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSE 181
+ S N+ I++C +GDD +A+K+G D G +A PS NIIV+ GV IGSE
Sbjct: 277 EYSQNIVIKNCTFNTGDDCIAIKAGRDADGRRVAIPSKNIIVQNCK-MIDGHGGVVIGSE 335
Query: 182 MSGGIFNVTVDQLHVWDAA---AGVRIKTDKGRGGYIENITIRNIKMERVK-IPIRISRG 237
+S G+ NV V+ V D+ +RIKT+ RGG IEN+ +RN+++ VK ++++
Sbjct: 336 ISAGVNNVFVENC-VMDSPNLDRAIRIKTNSRRGGIIENVFVRNLEVGTVKECVLKLNMF 394
Query: 238 SNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLA-GIIGTQFEEICMKNVSL 291
N + + + +P IR I+ NV N K + A G + E I +KNV +
Sbjct: 395 YNVYGSQTGN--FIPVIRNINLENVNVKNGGKYSIWAEGYKESPVENITLKNVKI 447
>gi|298480639|ref|ZP_06998835.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298273073|gb|EFI14638.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 469
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 93/292 (31%), Positives = 142/292 (48%), Gaps = 50/292 (17%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQM--WWDLW---------------------------- 56
LI+ +N+ ITG G IDGQG + WW +
Sbjct: 141 LIYAYGESNIAITG-KGIIDGQGSIDAWWPMCGSAKYGWKEGMVAQRNGGRERLQMYGET 199
Query: 57 ----WNRTLKHTRG---HLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILA 109
+ R +K G L+ L + + ILI +T NSPFW IHP++C ++++ G+T+
Sbjct: 200 STPVYKRLMKPEDGMRPQLLNLHSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFN 259
Query: 110 PLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGT 169
PN DG DP+S NV IE+C ++GDD +A+KSG + G PS NIIVR
Sbjct: 260 --RGPNGDGCDPESCKNVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMK 317
Query: 170 TPTCSGVGIGSEMSGGIFNVTVD--QLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMER 227
GV IGSE+SGG N+ V+ Q+ + +RIKT RGG IENI +RN+ + +
Sbjct: 318 NGH-GGVVIGSEISGGYRNLFVEDCQMDSPNLDRVIRIKTSTCRGGLIENIFVRNVTVGQ 376
Query: 228 VK---IPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGI 276
+ + I + + + G++ P +R + NV + ++ G+
Sbjct: 377 CREAVLRINLQYENREKCKRGFE----PIVRNVHLKNVTCEKSELGVLIIGL 424
>gi|315497213|ref|YP_004086017.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
gi|315415225|gb|ADU11866.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
Length = 466
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 113/214 (52%), Gaps = 24/214 (11%)
Query: 29 HGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKHTRGHLVELMNSNNILISNLTFRNSP 88
H D L + Y G QM H R H V+ ++LI +++ +SP
Sbjct: 179 HMDALVRLYDLAYKGVPVEARQMV------EGENHLRPHFVQFNRCRHVLIEDISIEDSP 232
Query: 89 FWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWD 148
FWTIHP+ CR+VVI+ + + A + N DG+DP+ S NV IEDC + GDD V+VKSG D
Sbjct: 233 FWTIHPLLCRDVVIRRVKVRA--HGHNNDGVDPEMSQNVLIEDCVFDQGDDAVSVKSGRD 290
Query: 149 HYGIAMARPSSNIIVR--RVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAG---- 202
+ P+ N+++R R+ + +GSE+SGGI N+ VD H G
Sbjct: 291 MDAWRLNTPTKNVVMRNCRIKNGHQL---MAVGSELSGGIENIFVDNCHFVGDGKGDDGW 347
Query: 203 -------VRIKTDKGRGGYIENITIRNIKMERVK 229
+ +KT++ RGGY++NI +RN+ +++
Sbjct: 348 AVPINNLLYVKTNERRGGYVKNIHMRNVSATKIQ 381
>gi|150388731|ref|YP_001318780.1| glycoside hydrolase [Alkaliphilus metalliredigens QYMF]
gi|149948593|gb|ABR47121.1| glycoside hydrolase, family 28 [Alkaliphilus metalliredigens QYMF]
Length = 519
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 86/236 (36%), Positives = 125/236 (52%), Gaps = 13/236 (5%)
Query: 26 SLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKHT---RGHLVELMNSNNILISNL 82
SL+ G + NV I G G IDG +D WW K R L+ + N +ILI +
Sbjct: 184 SLLTGIGVNNVKIIG-KGIIDGNAS--FDNWWKDAKKKRVAWRPRLIFIKNCRDILIEEV 240
Query: 83 TFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVA 142
T +NSP WTIHP++ +N+ + + ++ P ++PNTDGI+P+S NV I GDD +A
Sbjct: 241 TVQNSPSWTIHPMFSQNLQLINLKVINPKDSPNTDGINPESCQNVKIIGVDFSVGDDCIA 300
Query: 143 VKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAG 202
+KSG + G + S +I++R G+ IGSEM+GG+ NV+ + + G
Sbjct: 301 IKSGKLYLGQRLKIASQDIMIRNCH-MKFGHGGIVIGSEMAGGVKNVSAIRCIFEETDRG 359
Query: 203 VRIKTDKGRG--GYIENITIRNIKMERVKIPIRISRGSNDHPDEG----WDPKALP 252
+RIKT +GRG G I I NI M++V P I+ PD W + LP
Sbjct: 360 IRIKTRRGRGKDGVINGINAENIVMKKVLTPFVINTFYFCDPDGKTEYVWSKEKLP 415
>gi|298385760|ref|ZP_06995318.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
gi|298261901|gb|EFI04767.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
Length = 445
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 151/320 (47%), Gaps = 51/320 (15%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWW--------DLWWN-------------------- 58
LI+ N+ I G GT+DGQG+ WW DL N
Sbjct: 114 LIYAVDAENITIKG-EGTLDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQPMWDAQNDTTA 172
Query: 59 ----------RTLKHT--RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMT 106
TL+ R ++ + + I + NSPFWT++P +C NV IKG+T
Sbjct: 173 IYAETNKDYVSTLQRRFFRPPFIQPVRCKKVKIEGVKIVNSPFWTVNPEFCDNVTIKGIT 232
Query: 107 ILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRV 166
I + +PNTDGI+P+S NV I DC+I GDD + +KSG D + P NI +
Sbjct: 233 I-NNVPSPNTDGINPESCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNC 291
Query: 167 SGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKME 226
+ GV IGSEMSG + VT+ G+RIK+ +GRGG +E+I + NI M
Sbjct: 292 T-MLAGHGGVVIGSEMSGSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNIVMS 350
Query: 227 RVKI-PIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPV-LAGIIGTQFEEI 284
+K + ++ + P E + P R + ++ ++V K P+ + G+ +I
Sbjct: 351 NIKQEAVVLNLKYSQMPAEAKSERT-PIFRNVH-ISGMTVTDAKTPIKIVGLEEAPISDI 408
Query: 285 CMKNVSLLGLAPSAKWQCQF 304
++++ + G A+ +C F
Sbjct: 409 VLRDIHIQG----ARQKCIF 424
>gi|393783422|ref|ZP_10371595.1| hypothetical protein HMPREF1071_02463 [Bacteroides salyersiae
CL02T12C01]
gi|392668855|gb|EIY62348.1| hypothetical protein HMPREF1071_02463 [Bacteroides salyersiae
CL02T12C01]
Length = 468
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 97/296 (32%), Positives = 142/296 (47%), Gaps = 50/296 (16%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLWW----------------------NRTLKH- 63
LI+ TN+ ITG GTIDGQG D WW R L +
Sbjct: 139 LIYAYGETNIAITG-KGTIDGQGSN--DTWWPMCGAAKYGWKEGMVAQRNGGRERLLMYG 195
Query: 64 ----------------TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTI 107
R L+ L + + ILI ++T NSPFW IHP++C +++++G+ I
Sbjct: 196 ETSTPIYKRVMTPEDGLRPQLINLYSCHTILIEDVTLLNSPFWVIHPLFCESLIVRGVNI 255
Query: 108 LAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVS 167
PN DG DP+S NV IE+C ++GDD +A+KSG + G PS NIIVR
Sbjct: 256 FN--RGPNGDGCDPESCKNVLIENCTFDTGDDCIAIKSGRNADGRKWNIPSENIIVRNCK 313
Query: 168 GTTPTCSGVGIGSEMSGGIFNVTVD--QLHVWDAAAGVRIKTDKGRGGYIENITIRNIKM 225
GV IGSE+SGG N+ V+ Q+ + +RIKT RGG IEN+ +R+I +
Sbjct: 314 MKNGH-GGVVIGSEISGGYRNLFVENCQMDSPNLDRVIRIKTSTCRGGIIENVFVRDITV 372
Query: 226 ERVKIPI-RISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQ 280
+ + + RI+ + E + P +R + NV + ++ G+ Q
Sbjct: 373 GQCREAVLRINLQYENR--ENCNRNFPPVVRNVHLKNVTCEKSRLGVLIIGLDDDQ 426
>gi|374374281|ref|ZP_09631940.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
gi|373233723|gb|EHP53517.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
Length = 465
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 144/297 (48%), Gaps = 37/297 (12%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMW-----------------WDLWWNRT--------- 60
LI+ NV ITG GT+ Q W ++L WNR
Sbjct: 153 LIYVYECKNVAITG-EGTLKAQMATWEKWFARPRAHMESIKRLYNLAWNRAPLEQRQMVN 211
Query: 61 -LKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGI 119
H R ++ S NIL+ ++ NSPFWTIH +N+ ++ + + A + N DG+
Sbjct: 212 DTAHLRPQFIQFNRSENILLEGVSVVNSPFWTIHLYLSKNIRLRNLNVYA--HGHNNDGV 269
Query: 120 DPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIG 179
DP+ S NV IE+C + GDD +A+KSG + G + PS NI++R + V IG
Sbjct: 270 DPEMSQNVLIENCVFDQGDDAIAIKSGRNPEGWRLKTPSKNIVIRNCT-VKNGHQLVAIG 328
Query: 180 SEMSGGIFNVTVDQLHVWDAAA---GVRIKTDKGRGGYIENITIRNIKMERVKIPIRISR 236
SE+SGGI NV +D V D A + IKT++ GGY++NI NI+ ++ + I
Sbjct: 329 SELSGGIENVFIDHCTVLDGAKLNHLLFIKTNERMGGYVKNIYASNIRSGKIDLGILGIE 388
Query: 237 GSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQ---FEEICMKNVS 290
+ P ++ I + + +++ ++ +A ++G + E + +KNV+
Sbjct: 389 TDVLYQWRDLVPTYEKRLTPIKDIFLTNIHASEVKFIARVLGQKALPVETVSLKNVT 445
>gi|326790331|ref|YP_004308152.1| polygalacturonase [Clostridium lentocellum DSM 5427]
gi|326541095|gb|ADZ82954.1| Polygalacturonase [Clostridium lentocellum DSM 5427]
Length = 515
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 99/281 (35%), Positives = 145/281 (51%), Gaps = 18/281 (6%)
Query: 24 HISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKHT--RGHLVELMNSNNILISN 81
+ S+I G + +V I G GTIDG GQ D W + +K R + L++ ++++
Sbjct: 177 YASIITGIGVRDVRIIG-QGTIDGNGQNA-DWWVDCKVKRGAWRPRSLYLVDCEDVVVEG 234
Query: 82 LTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLV 141
+T +NSP WT+HPV + +T+ P ++PNTDGIDP+S V I GDD +
Sbjct: 235 ITIKNSPSWTVHPVRSTKLRFINLTLNNPKDSPNTDGIDPESCNGVEIIGVKFSLGDDCI 294
Query: 142 AVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAA 201
A+KSG + M RPS NII+R GV +GSEMSGGI +V V++ +
Sbjct: 295 AIKSGKISVPVDMRRPSENIIIRNCLMEYGH-GGVVLGSEMSGGIKHVYVERCFFRNTDR 353
Query: 202 GVRIKTDKGRG--GYIENITIRNIKMERVKIPIRISRGSNDHPDEG----WDPKAL---- 251
G+RIKT +GRG I+ I I+NIKM+ V P ++ PD W L
Sbjct: 354 GLRIKTRRGRGNTAVIDEIYIKNIKMDGVLTPFTLNCFYFCDPDGKTEYVWSKDKLPVDE 413
Query: 252 --PKIRGISFVNVVSVNTTK-APVLAGIIGTQFEEICMKNV 289
P I ++F N+ N+ A + G+ +E+ KNV
Sbjct: 414 RTPYIGTLNFENIYCENSEVCAGFIYGLPEQTIKELNFKNV 454
>gi|451820152|ref|YP_007456353.1| endopolygalacturonase [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
gi|451786131|gb|AGF57099.1| endopolygalacturonase [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
Length = 506
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 143/268 (53%), Gaps = 17/268 (6%)
Query: 65 RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSS 124
R ++ +NNILI ++T NSPFW ++PV C N+ + G+ I N N DG+DP+S
Sbjct: 238 RPPFIQPYKTNNILIRDITILNSPFWEVNPVLCENIKVSGIRI--DTNLYNNDGVDPESC 295
Query: 125 TNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSG 184
++ IE+CY +GDD +A+KSG ++ G + P+SNII+R + G+ IGSE+SG
Sbjct: 296 KDMIIENCYFLTGDDCIAIKSGRNNEGRNIGIPTSNIIIRN-NEFKDGHGGITIGSEISG 354
Query: 185 GIFNVTVDQLHVWDAAA---GVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDH 241
G+ N+ + +D+ +R KT+ RGG +ENI I+N + + K+ + ++
Sbjct: 355 GVNNI-FGHDNYFDSEELDYPIRFKTNAERGGLLENIYIKNSTVNKSKVAV---IHADFF 410
Query: 242 PDEGWDPKALPKIRGISFVNVV-----SVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAP 296
+EG + P +R I+ N+ S++ A L G E I +++ L G+
Sbjct: 411 YEEGTNGNHKPILRNIALSNIKTVDGGSIDAKNALYLKGFEDAPIENILIEDALLNGVKG 470
Query: 297 SAKWQCQFVSGFTSQVFPLPCPQLQNKS 324
A Q + T + + +L++KS
Sbjct: 471 EAVLQN--IKNLTFRNVSINGKKLEDKS 496
>gi|375100883|ref|ZP_09747146.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
gi|374661615|gb|EHR61493.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
Length = 460
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 142/290 (48%), Gaps = 35/290 (12%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTL------------------------K 62
LI+ + +V ITG NG IDG + W ++
Sbjct: 147 LIYAHDVHDVAITG-NGVIDGNPDSEFHTWTDKQDADVQALRRMGFDGVPLEQRQFGEGH 205
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
H R ++++ ++ +L+++ T RNSPFW H VY + V++G+T+ + + PN DG+D D
Sbjct: 206 HLRPSMIQIFDAERVLLADYTVRNSPFWINHLVYTDDAVVRGLTVDS--HNPNNDGVDVD 263
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SST+V IE +GDD V VKSG D G + RPS N++VR G+ +GSEM
Sbjct: 264 SSTDVLIEHNTFRTGDDSVVVKSGRDKDGRDIGRPSRNVVVRH--NDMGGEDGIALGSEM 321
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGGI +V + AA +R K + RGG +E+I +RN ++ + R+ D+P
Sbjct: 322 SGGISHVYFTDNTLRSGAAAIRFKGNLDRGGTVEHIRVRNFDIDSFE---RLIWFQLDYP 378
Query: 243 DE-GWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 291
E G D P R I F + + + G ++ ++N+++
Sbjct: 379 GELGGDFP--PVYRDIVFSDFTVTSADTLLEIHGPDAAPLRDVTLRNITV 426
>gi|157693735|ref|YP_001488197.1| glycoside hydrolase [Bacillus pumilus SAFR-032]
gi|157682493|gb|ABV63637.1| glycoside hydrolase [Bacillus pumilus SAFR-032]
Length = 463
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 87/250 (34%), Positives = 132/250 (52%), Gaps = 44/250 (17%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQG----------------------QMWWDLWWNRTLKHT 64
LI+ H N+ ITG GT+DG+G Q+ +D+ R
Sbjct: 144 LIYAHHAENIAITG-AGTLDGRGDEHHWWPWKYGTNGQPSQERDRQLLFDMAEKRRPVEE 202
Query: 65 R----GH-----LVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPN 115
R GH ++ +LI +T ++SP W IHPV +V+++G+ I+ + PN
Sbjct: 203 RVFGEGHYLRSSFIQPYQCQQVLIEGVTVKDSPMWQIHPVLSEHVIVRGVHIIG--HGPN 260
Query: 116 TDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSG 175
TDG++P+S NV IEDCY ++GDD +A+KSG + G + PS NI++RR + G
Sbjct: 261 TDGVNPESCRNVLIEDCYFDNGDDCIAIKSGRNEDGRRIGIPSENIVIRR-NEMRDGHGG 319
Query: 176 VGIGSEMSGGIFNVTVDQLHVWDAA---AGVRIKTDKGRGGYIENI-----TIRNIKMER 227
V IGSE+SGG+ V + +V D+ +RIKT+ RGG IE+I T++++K E
Sbjct: 320 VTIGSEISGGVRYVYAEN-NVMDSPNLDRALRIKTNSVRGGTIEHIYFKNNTVKSLKHEV 378
Query: 228 VKIPIRISRG 237
V I + G
Sbjct: 379 VCIDMMYEEG 388
>gi|261822466|ref|YP_003260572.1| glycoside hydrolase family protein [Pectobacterium wasabiae WPP163]
gi|261606479|gb|ACX88965.1| glycoside hydrolase family 28 [Pectobacterium wasabiae WPP163]
gi|385872775|gb|AFI91295.1| Glycoside hydrolase family 28 [Pectobacterium sp. SCC3193]
Length = 460
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 120/211 (56%), Gaps = 24/211 (11%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWWNRTLKHT-------RGHLVELMNSNNILISNLTFRNS 87
NV ITG GTIDGQG +WW+ W ++ T R L+ + +S+N+L+ ++T +S
Sbjct: 135 NVAITG-EGTIDGQGAVWWE-RWRENIRATGKKGGTDRPRLIYIKSSSNVLVDSVTLTHS 192
Query: 88 PFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGW 147
P + I Y +V + G IL+P +APNTD IDP S N+ I + YI+ DD +A+K+
Sbjct: 193 PSFHIVMRYSHDVDVNGTRILSPWHAPNTDAIDPIDSQNIRITNNYIDCNDDHIAIKA-- 250
Query: 148 DHYGIAMARPSS---NIIVRRV---SGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAA 201
+P S N +V + + G+ IGSE SGG+ NV V+ +
Sbjct: 251 -------EKPDSRFPNGVVDNIYIANNILKQGRGISIGSETSGGVNNVLVENNQFEGSMY 303
Query: 202 GVRIKTDKGRGGYIENITIRNIKMERVKIPI 232
G+RIKT +G+GG ++NIT RN KM V+IP+
Sbjct: 304 GIRIKTLRGKGGEVKNITYRNTKMVDVEIPL 334
>gi|402307601|ref|ZP_10826623.1| pectate lyase family protein [Prevotella sp. MSX73]
gi|400378313|gb|EJP31171.1| pectate lyase family protein [Prevotella sp. MSX73]
Length = 471
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 95/292 (32%), Positives = 143/292 (48%), Gaps = 36/292 (12%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLW---------WNRTLKHT------------- 64
+I+G +L +V I G G IDG + W +R + H
Sbjct: 148 MIYGRNLHDVSIVG-KGLIDGNCAATFATWRARQKEGQTLSRRMNHEERPLAERNFGEGH 206
Query: 65 --RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
R L++L N+ I + NSPFW IH + NV+ +G+ A L N DGIDP+
Sbjct: 207 WLRPQLIQLFGCRNVTIEGVKIINSPFWCIHLLQSENVICRGLRYDAKL--VNNDGIDPE 264
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SS NV IED ++GDD VA+KSG D+ G A PS NII+RR V IGSEM
Sbjct: 265 SSRNVLIEDVSFDNGDDNVAIKSGRDNDGWTHAHPSENIIIRRCR--FKGLHAVVIGSEM 322
Query: 183 SGGIFNVTVDQLHVWD-AAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDH 241
SGG+ NV V+ G+ IKT+ RGGY++NI +++ + + V+ I + ++ +
Sbjct: 323 SGGVRNVFVEDCDFAGYCKRGLYIKTNPDRGGYVKNIYMKDCRFDEVEDLIYV---TSMY 379
Query: 242 PDEGWDPKALPKIRGISFVNVVSVNTTKAP--VLAGIIGTQFEEICMKNVSL 291
EG + ++ + V+ VS +A VL G ++ ++ V +
Sbjct: 380 AGEGLGSRHFSEVEHL-LVDGVSCRKARAAGIVLQGTKAKPIRDVTIRRVEI 430
>gi|430837659|ref|ZP_19455621.1| glycosyl hydrolase [Enterococcus faecium E0680]
gi|430840340|ref|ZP_19458267.1| glycosyl hydrolase [Enterococcus faecium E0688]
gi|430859280|ref|ZP_19476893.1| glycosyl hydrolase [Enterococcus faecium E1552]
gi|430487173|gb|ELA63943.1| glycosyl hydrolase [Enterococcus faecium E0680]
gi|430489826|gb|ELA66401.1| glycosyl hydrolase [Enterococcus faecium E0688]
gi|430544024|gb|ELA84074.1| glycosyl hydrolase [Enterococcus faecium E1552]
Length = 436
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 119/217 (54%), Gaps = 23/217 (10%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWWNRTLKH-TRGHLVE------------------LMNSN 75
+++I G G IDGQG WW+L+W + K TR + L ++
Sbjct: 103 DILIEG-KGIIDGQGDHWWELYWGKDQKSGTRAEYDQKGLRWIADYAIKRPRACLLYHAE 161
Query: 76 NILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIE 135
++++ +L F+ S FW + Y +V+++ + I+ + P+TDGID D STNV + +C +
Sbjct: 162 HVVVRDLIFQKSGFWNLQITYSNDVLVEKV-IIRNNDGPSTDGIDIDYSTNVRVYECDLA 220
Query: 136 SGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLH 195
GDD +A+KSG D G + R SS I V R + GV IGSE+S G+ +V + +
Sbjct: 221 CGDDCIAIKSGRDGNGARVNRKSSRIEVARCK--IRSGYGVTIGSEVSAGVSDVYIHDID 278
Query: 196 VWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPI 232
+ + G+R+K+ K RGG IENI + N+ M V+ P
Sbjct: 279 FFQSDCGIRMKSSKERGGVIENIRVENLNMIDVQFPF 315
>gi|322436856|ref|YP_004219068.1| glycoside hydrolase family protein [Granulicella tundricola
MP5ACTX9]
gi|321164583|gb|ADW70288.1| glycoside hydrolase family 28 [Granulicella tundricola MP5ACTX9]
Length = 414
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 92/281 (32%), Positives = 149/281 (53%), Gaps = 20/281 (7%)
Query: 25 ISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK--------HTRGHLVELMNSNN 76
+ +H + NV ITG GTIDGQG++WWD + + K H R + + +S +
Sbjct: 101 LPFLHIVNADNVKITG-GGTIDGQGKVWWD--YVKGAKDAGVLGNDHPRPMGLLIDHSKH 157
Query: 77 ILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLN-APNTDGIDPDSSTNVCIEDCYIE 135
+ + N+T +N+ FW + P Y +V + +LAP APNTDGIDP SS+++ I+ +
Sbjct: 158 VTVENITIQNAGFWQVVPYYSDYLVFSHLRVLAPQRGAPNTDGIDPFSSSHIKIDHYFSS 217
Query: 136 SGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLH 195
GDD +A+KSG + A PS +I++ + G+ IGSE++GG+ +V +++
Sbjct: 218 VGDDNIAIKSGAINSPGPDA-PSEDIVITDC--IFESGHGLSIGSEIAGGVHHVHAERIS 274
Query: 196 VWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDPKA----- 250
G+R+K ++ RG ++T ++I M+ V+ I IS EG A
Sbjct: 275 FKGTDQGIRVKANRDRGNDTSDLTFKDITMDDVRTSILISEYYPKAMPEGEVASAPITRL 334
Query: 251 LPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 291
P I NV SVN+ A V+ G+ + +I +KNVS+
Sbjct: 335 TPHFHDIHIENVKSVNSDWAGVIVGLPESPVTDISLKNVSI 375
>gi|421083085|ref|ZP_15543964.1| Glycoside hydrolase family 28 [Pectobacterium wasabiae CFBP 3304]
gi|401702311|gb|EJS92555.1| Glycoside hydrolase family 28 [Pectobacterium wasabiae CFBP 3304]
Length = 460
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 94/285 (32%), Positives = 142/285 (49%), Gaps = 54/285 (18%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWWNRTLKHT-------RGHLVELMNSNNILISNLTFRNS 87
NV ITG GTIDGQG +WW+ W ++ T R L+ + +S+N+L+ +T +S
Sbjct: 135 NVAITG-QGTIDGQGAVWWE-RWRENIRATGKKGGTDRPRLIYIKSSSNVLVDGVTLTHS 192
Query: 88 PFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGW 147
P + + Y +V + G IL+P +APNTD IDP S N+ I + YI+ DD +A+K+
Sbjct: 193 PSFHVVMRYSHDVDVNGTRILSPWHAPNTDAIDPIDSQNIRITNNYIDCNDDHIAIKA-- 250
Query: 148 DHYGIAMARPSS---NIIVRRV---SGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAA 201
+P S N +V + + G+ IGSE SGG+ NV V+ +
Sbjct: 251 -------EKPDSRFPNGVVDNIYIANNILKQGRGISIGSETSGGVNNVLVENNQFEGSMY 303
Query: 202 GVRIKTDKGRGGYIENITIRNIKMERVKIPI------------------RISRG------ 237
G+RIKT +G+GG ++NIT RN KM V+IP+ ++ G
Sbjct: 304 GIRIKTLRGKGGEVKNITYRNTKMVDVEIPLVFAAYYKAAPIVQAEVDKMLAEGGFTMGE 363
Query: 238 ----SNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIG 278
S+ P++ +D P ++ N+ S TKA A IIG
Sbjct: 364 QIYPSDTDPEQPFDQHKTPHFSNVTIENLESTGKTKAA--AYIIG 406
>gi|346223842|ref|ZP_08844984.1| glycoside hydrolase family protein [Anaerophaga thermohalophila DSM
12881]
Length = 532
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 139/288 (48%), Gaps = 34/288 (11%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKHT---------------------- 64
LI+ ++TNV ITG GT++GQGQ W L W
Sbjct: 159 LIYAANVTNVSITG-KGTLEGQGQHW--LEWGTVQPRANAAKVPLSRRKNFGKGAGKEGM 215
Query: 65 RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSS 124
R + V S NIL+ +T SP W IH VY +N +++ +T+ + L++ N DG+ DSS
Sbjct: 216 RPNFVVFWKSKNILVEGITLNESPMWNIHLVYSQNAIVRDITVNS-LDSQNGDGVVVDSS 274
Query: 125 TNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSG--TTPTCSGVGIGSEM 182
+V +E + +GDD + +KSG++ G+A+ P+ N+++R GV GSE
Sbjct: 275 HDVLLEYNQLHTGDDAIVLKSGFNEDGLAINIPTENVVIRNYYAYKVRTGSGGVVFGSET 334
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKI-PIRISRGSNDH 241
SGGI NV V G+R KT +GRG IENI +R+I M+ + I I+ +
Sbjct: 335 SGGIRNVYVHDAVFEKCDRGIRFKTARGRGNVIENIFVRDISMKDITYEAININTA---Y 391
Query: 242 PDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV 289
G P P +R I N+ A VL G+ E I M N+
Sbjct: 392 AGAGIGPS--PMVRNIDIRNIRIDGVPDAIVLNGLPEKWIENIRMDNI 437
>gi|383122658|ref|ZP_09943350.1| hypothetical protein BSIG_0597 [Bacteroides sp. 1_1_6]
gi|251842244|gb|EES70324.1| hypothetical protein BSIG_0597 [Bacteroides sp. 1_1_6]
Length = 445
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 152/320 (47%), Gaps = 51/320 (15%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWW--------DLWWN-------------------- 58
LI+ N+ I G GT+DGQG+ WW DL N
Sbjct: 114 LIYAVDAENITIKG-EGTLDGQGKKWWMEFFRVMIDLKDNGMRDINKYQPMWDAQNDTTA 172
Query: 59 ----------RTLKHT--RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMT 106
TL+ R ++ + + I + NSPFWT++P +C NV IKG+T
Sbjct: 173 IYAETNKDYVSTLQRRFFRPPFIQPVRCKKVKIEGVKIVNSPFWTVNPEFCDNVTIKGIT 232
Query: 107 ILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRV 166
I + +PNTDGI+P+S NV I DC+I GDD + +KSG D + P NI +
Sbjct: 233 I-NNVPSPNTDGINPESCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNC 291
Query: 167 SGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKME 226
+ + GV IGSEMSG + VT+ G+RIK+ +GRGG +E+I + NI M
Sbjct: 292 TMLSGH-GGVVIGSEMSGSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNIVMS 350
Query: 227 RVKI-PIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPV-LAGIIGTQFEEI 284
+K + ++ + P E + P R + ++ ++V K P+ + G+ +I
Sbjct: 351 NIKQEAVVLNLKYSQMPAEAKSERT-PIFRNVH-ISGMTVTDVKTPIKIVGLEEAPIFDI 408
Query: 285 CMKNVSLLGLAPSAKWQCQF 304
++++ + G A+ +C F
Sbjct: 409 VLRDIHIQG----ARQKCIF 424
>gi|253687486|ref|YP_003016676.1| glycoside hydrolase family protein [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|251754064|gb|ACT12140.1| glycoside hydrolase family 28 [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 460
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 119/211 (56%), Gaps = 24/211 (11%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWWNRTLKHT-------RGHLVELMNSNNILISNLTFRNS 87
NV ITG GTIDGQG +WW+ W ++ T R L+ + +S+N+L+ +T +S
Sbjct: 135 NVAITG-QGTIDGQGAVWWE-RWRENIRATGKKGGTDRPRLIYIKSSSNVLVDGVTLTHS 192
Query: 88 PFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGW 147
P + I Y +V + G IL+P +APNTD IDP S N+ I + YI+ DD +A+K+
Sbjct: 193 PSFHIVMRYSHDVDVNGTRILSPWHAPNTDAIDPIDSQNIRITNNYIDCNDDHIAIKA-- 250
Query: 148 DHYGIAMARPSS---NIIVRRV---SGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAA 201
+P S N +V + + G+ IGSE SGG+ NV V+ +
Sbjct: 251 -------EKPDSRFPNGVVDNIYIANNILKQGRGISIGSETSGGVNNVLVENNQFEGSMY 303
Query: 202 GVRIKTDKGRGGYIENITIRNIKMERVKIPI 232
G+RIKT +G+GG ++NIT RN KM V+IP+
Sbjct: 304 GIRIKTLRGKGGEVKNITYRNTKMVDVEIPL 334
>gi|430854301|ref|ZP_19472017.1| glycosyl hydrolase [Enterococcus faecium E1258]
gi|430539030|gb|ELA79293.1| glycosyl hydrolase [Enterococcus faecium E1258]
Length = 436
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 119/217 (54%), Gaps = 23/217 (10%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWWNRTLKH-TRGHLVE------------------LMNSN 75
+++I G IDGQG WW+L+W + K TR + L ++
Sbjct: 103 DILIEGKR-IIDGQGDHWWELYWGKDQKSGTRAEYDQKGLRWIADYAIKRPRACLLYHAE 161
Query: 76 NILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIE 135
++++ +L F+ S FW + Y +V+++ + I+ + P+TDGID DSSTNV + +C +
Sbjct: 162 HVVVRDLIFQKSGFWNLQITYSNDVLVEKV-IICNNDGPSTDGIDIDSSTNVRVYECDLA 220
Query: 136 SGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLH 195
GDD +A+KSG D G + R SS I V R + GV IGSE+S G+ +V + +
Sbjct: 221 CGDDCIAIKSGRDGNGARVNRKSSRIEVARCK--IRSGYGVTIGSEVSAGVSDVYIHDID 278
Query: 196 VWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPI 232
+ + G+R+K+ K RGG IENI + N+ M V+ P
Sbjct: 279 FFQSDCGIRMKSSKERGGVIENIRVENLNMIDVQFPF 315
>gi|280977865|gb|ACZ98650.1| polygalacturonase [Cellulosilyticum ruminicola]
Length = 518
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/224 (37%), Positives = 122/224 (54%), Gaps = 7/224 (3%)
Query: 24 HISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKHT--RGHLVELMNSNNILISN 81
+ SL+ G + +V I G GT+DG GQ D W N +K R + L+ ++IL+
Sbjct: 180 YASLLTGIGVEDVRIIG-EGTLDGNGQNG-DWWINCKVKREAWRPRSLYLLECHDILVEG 237
Query: 82 LTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLV 141
+T +NSP WT+HP+ + +T+ P ++PNTDGIDP+S V I GDD +
Sbjct: 238 ITIKNSPSWTVHPIRSSKLRFINLTLNNPKDSPNTDGIDPESCNGVEILGVKFSLGDDCI 297
Query: 142 AVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAA 201
A+KSG + RPS NII+R V +GSEMSGG+ NV V++ D
Sbjct: 298 AIKSGKISIPLKERRPSENIIIRNCLMQYGH-GAVVLGSEMSGGVKNVFVERCFFEDTDR 356
Query: 202 GVRIKTDKGRG--GYIENITIRNIKMERVKIPIRISRGSNDHPD 243
G+RIKT +GRG I+ I ++NI+M+ V P ++ PD
Sbjct: 357 GLRIKTRRGRGNTAIIDQIYVKNIQMKGVLTPFTLNAFYFCDPD 400
>gi|182415146|ref|YP_001820212.1| galacturan 1,4-alpha-galacturonidase [Opitutus terrae PB90-1]
gi|177842360|gb|ACB76612.1| Galacturan 1,4-alpha-galacturonidase [Opitutus terrae PB90-1]
Length = 478
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 139/274 (50%), Gaps = 24/274 (8%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKHTRG-------HLVELMNSNNILI 79
LIHG L +V ITG +G IDG G +WW W R + RG H++ + + +
Sbjct: 184 LIHGRKLHDVAITG-SGQIDGNGALWW-AWSERAARAQRGRLVYKRTHMIIIDGCERLRV 241
Query: 80 SNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDD 139
+++T NS + + P ++ I+ + + AP APNTD IDP S TN I C I++GDD
Sbjct: 242 ADVTLSNSAMFHLVPRRITDLTIERVKVRAPEEAPNTDAIDPGSVTNAWIHHCDIDTGDD 301
Query: 140 LVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDA 199
+ +KSG +NI++ G+ IGSE + G+ N+ V +
Sbjct: 302 NIVIKSG-----------GTNILIE--DCVIKHGHGISIGSETTEGVRNMLVRRCSFDGT 348
Query: 200 AAGVRIKTDKGRGGYIENITIRNIKMERVK--IPIRISRGSNDHPDEGWDPKALPKIRGI 257
G+RIK+ +G GG +ENI I M+ V+ I + ++ N+ P+ DP +P IR I
Sbjct: 349 DNGIRIKSMRGAGGVVENIRYTGITMKDVENAIVLDLTYTDNNRPNFRGDPTKIPVIRDI 408
Query: 258 SFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 291
+V + KA + G+ + + +++V++
Sbjct: 409 LIDHVTVTGSLKAGKIVGLPDSPISGVTLRDVTI 442
>gi|425057510|ref|ZP_18460923.1| polygalacturonase [Enterococcus faecium 504]
gi|403040305|gb|EJY51392.1| polygalacturonase [Enterococcus faecium 504]
Length = 436
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 119/217 (54%), Gaps = 23/217 (10%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWWNRTLKH-TRGHLVE------------------LMNSN 75
+++I G G IDGQG WW+L+W + K TR + L ++
Sbjct: 103 DILIEG-KGIIDGQGDHWWELYWGKDQKSGTRAEYDQKGLRWIADYAIKRPRACLLYHAE 161
Query: 76 NILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIE 135
++++ +L F+ S FW + Y +V+++ + I+ + P+TDGID DSSTNV + +C +
Sbjct: 162 HVVVRDLIFQKSGFWNLQITYSNDVLVEKV-IIRNNDGPSTDGIDIDSSTNVRVYECDLA 220
Query: 136 SGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLH 195
GDD +A+KSG D G + R SS I V R + GV IGSE+S G+ +V + +
Sbjct: 221 CGDDCIAIKSGRDGNGARVNRKSSRIEVARCK--IRSGYGVTIGSEVSAGVSDVYIHDID 278
Query: 196 VWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPI 232
+ + G+R+K+ K RG IENI + N+ M V+ P
Sbjct: 279 FFQSDCGIRMKSSKERGEVIENIRVENLNMIDVQFPF 315
>gi|300728229|ref|ZP_07061597.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
gi|299774464|gb|EFI71088.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
Length = 856
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/236 (33%), Positives = 128/236 (54%), Gaps = 13/236 (5%)
Query: 65 RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSS 124
R L+ + S NILI ++T SPFW IHP+ C+N+ + G+ I PN DG DP++
Sbjct: 211 RPQLINFVRSENILIKDVTLLRSPFWVIHPLLCKNITVDGVQIWN--EGPNGDGCDPEAC 268
Query: 125 TNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSG 184
NV I++ +GDD +A+KSG ++ G +PS NII+R GV IGSE+SG
Sbjct: 269 ENVIIQNTLFHTGDDCIAIKSGRNNDGRFWGKPSKNIIIRNCK-MEDGHGGVVIGSEISG 327
Query: 185 GIFNVTVDQLHVW--DAAAGVRIKTDKGRGGYIENITIRNIKMERVK---IPIRISRGSN 239
G NV + ++ + +RIKT+ RGG I+NI +RN+K+ + K + I + +N
Sbjct: 328 GCENVYAENCYMDSPNLERVLRIKTNNCRGGLIQNINMRNVKVGQCKEAVLKINLDYENN 387
Query: 240 DHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGT-QFEEICMKNVSLLGL 294
+ G++ P +R ++ NV + ++ G+ +I +KN + G+
Sbjct: 388 EDCYRGFE----PTVRNVNMENVTCEKSEYGVLMIGLDNVDNIYDINLKNCTFNGV 439
>gi|82524094|emb|CAJ19131.1| putative endopolygalacturonase [unidentified microorganism]
Length = 448
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/291 (32%), Positives = 134/291 (46%), Gaps = 34/291 (11%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLWWN---------RTLKHT------------- 64
I+G L +V I G GTIDG + W + R + H
Sbjct: 126 FIYGYQLHDVSIIG-KGTIDGNAMTTFATWRSLQKPAQQRSRDMNHAGTPVSERNFGEGD 184
Query: 65 --RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
R HL++L I I ++ NSPFW IH + N +++ + A L N DGIDP+
Sbjct: 185 YLRPHLIQLYGCERITIEDVFITNSPFWCIHLLQSENAILRSIRFDAKL--VNNDGIDPE 242
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S NV IED + +GDD VA+KSG DH G A PS NII+R V +GSEM
Sbjct: 243 MSRNVLIEDVHFNNGDDNVAIKSGRDHDGRGTACPSENIIIRNCH--FKGLHAVVLGSEM 300
Query: 183 SGGIFNVTVDQL-HVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDH 241
S GI NV V+ + G+ IKT+ RGG+I NI+ +N + + V+ I ++ +
Sbjct: 301 SAGIQNVYVENCDYAGYCKRGLYIKTNPDRGGFIRNISFKNCEFDEVEDLFYI---TSMY 357
Query: 242 PDEGWDPKALPKIRGISFVNVVSVNTTKAP-VLAGIIGTQFEEICMKNVSL 291
EG D I I+ N+ VL G I +N+++
Sbjct: 358 GGEGQDNTFFTDIENITVENIQCRKARAGGLVLQGTKAKPLRNIQFRNITI 408
>gi|399032129|ref|ZP_10731768.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398069540|gb|EJL60890.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 479
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/308 (31%), Positives = 154/308 (50%), Gaps = 50/308 (16%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQM--WWDLW-------W-----------NRTL----- 61
L++ + TNV ITG GT++GQ WW +W W NR +
Sbjct: 147 LVYAKNKTNVAITG-KGTLNGQANSSNWW-VWSGGKSYGWQKGNPSQNDPANREVLVDMA 204
Query: 62 --------------KHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTI 107
++ R + +E N +LI ++ N+PFW +HP+ N++I G+T+
Sbjct: 205 EKGVPVTERVFGEGRYLRPNFIEFFECNTVLIKDIKIINAPFWILHPMKSNNIIIDGVTV 264
Query: 108 LAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVS 167
+ + PN DG DP+ S N+ I++C +GDD +A+KSG D G +A PS NIIV+
Sbjct: 265 NS--HGPNNDGCDPEYSQNIIIKNCVFNTGDDCIAIKSGRDADGRRVAIPSKNIIVQNCK 322
Query: 168 GTTPTCSGVGIGSEMSGGIFNVTVDQ--LHVWDAAAGVRIKTDKGRGGYIENITIRNIKM 225
GV IGSE+S G+ NV V+ + + +RIKT+ RGG IE++ +RN+++
Sbjct: 323 -MIDGHGGVVIGSEISAGVNNVFVENCIMDSPNLDRAIRIKTNSKRGGVIEDVYVRNLEV 381
Query: 226 ERVK-IPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLA-GIIGTQFEE 283
VK ++++ N + + +P IR IS NV K V A G + E
Sbjct: 382 GTVKECVLKLNMFYNVYGSQ--TGSFIPVIRNISLENVTVKKAGKYGVWAEGYKESPVEN 439
Query: 284 ICMKNVSL 291
+ +KNV +
Sbjct: 440 VTLKNVVI 447
>gi|266623900|ref|ZP_06116835.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
gi|288864287|gb|EFC96585.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
Length = 537
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/219 (36%), Positives = 120/219 (54%), Gaps = 9/219 (4%)
Query: 26 SLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWN---RTLKHTRGHLVELMNSNNILISNL 82
S+I G H++NV+ITG GT+DG +D WW + R +V L + +++++ +
Sbjct: 182 SMITGIHVSNVVITG-EGTLDGCAT--FDDWWEDDRAKIIAFRPRMVFLNHCDHVVLHGV 238
Query: 83 TFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVA 142
T +NSP W +HP + ++ +TIL P ++PNTDG+DP+S + I Y GDD +A
Sbjct: 239 TIQNSPSWNLHPYFSDDLRFLDLTILNPWDSPNTDGMDPESVNGLEIAGIYFSLGDDCIA 298
Query: 143 VKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAG 202
+KSG + G PS NI VR+ V IGSEM+ G+ +V V G
Sbjct: 299 LKSGKYYMGHKYKVPSQNIEVRQCCMNNGH-GAVTIGSEMAAGVKHVHVKDCLFLHTDRG 357
Query: 203 VRIKTDKGRG--GYIENITIRNIKMERVKIPIRISRGSN 239
+RIKT +GRG +E+I NI+M+ V P ++ N
Sbjct: 358 LRIKTRRGRGKDAVVEDICFENIRMDHVLTPFVLNSFYN 396
>gi|288925897|ref|ZP_06419827.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
gi|288337321|gb|EFC75677.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
Length = 459
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/292 (32%), Positives = 143/292 (48%), Gaps = 36/292 (12%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLW---------WNRTLKHT------------- 64
+I+G +L +V I G G IDG + W +R + H
Sbjct: 136 MIYGRNLHDVSIVG-KGLIDGNCAATFATWRARQKEGQTLSRRMNHEERPLAERNFGEGH 194
Query: 65 --RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
R L++L N+ I + NSPFW IH + NV+ +G+ A L N DGIDP+
Sbjct: 195 WLRPQLIQLFGCRNVTIEGVKIINSPFWCIHLLQSENVICRGLRYDAKL--VNNDGIDPE 252
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SS NV IED ++GDD VA+KSG D+ G A PS NII+RR V IGSEM
Sbjct: 253 SSRNVLIEDVSFDNGDDNVAIKSGRDNDGWTHAHPSENIIIRRCR--FKGLHAVVIGSEM 310
Query: 183 SGGIFNVTVDQLHVWD-AAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDH 241
SGG+ NV V+ G+ IKT+ RGGY++NI +++ + + V+ I + ++ +
Sbjct: 311 SGGVRNVFVEDCDFAGYCKRGLYIKTNPDRGGYVKNIYMKDCRFDEVEDLIYV---TSMY 367
Query: 242 PDEGWDPKALPKIRGISFVNVVSVNTTKAP--VLAGIIGTQFEEICMKNVSL 291
EG + ++ + V+ VS +A VL G ++ ++ V +
Sbjct: 368 AGEGLGSRHFSEVEHL-LVDGVSCRRARAAGIVLQGTKAKPIRDVTIRRVEI 418
>gi|376338084|gb|AFB33587.1| hypothetical protein 2_7803_01, partial [Pinus cembra]
Length = 138
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/138 (45%), Positives = 87/138 (63%)
Query: 145 SGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVR 204
SGWD YGI RPSSNII+RRV G T T SG+ +GSEMSGGI V L ++++ G+R
Sbjct: 1 SGWDEYGITYGRPSSNIIIRRVIGQTHTSSGLALGSEMSGGIQGVHAQDLQIFNSRRGLR 60
Query: 205 IKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVS 264
IKT GRGGY+ ++ I N+ M+ V + I + DHPD+ +DP ALP I+ I+F +++
Sbjct: 61 IKTAPGRGGYVRDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALPXIQRITFKDIIG 120
Query: 265 VNTTKAPVLAGIIGTQFE 282
A + GI F+
Sbjct: 121 XEIKTAGSVEGIQNAPFK 138
>gi|315606960|ref|ZP_07881966.1| glycoside hydrolase [Prevotella buccae ATCC 33574]
gi|315251341|gb|EFU31324.1| glycoside hydrolase [Prevotella buccae ATCC 33574]
Length = 459
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/292 (32%), Positives = 143/292 (48%), Gaps = 36/292 (12%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLW---------WNRTLKHT------------- 64
+I+G +L +V I G G IDG + W +R + H
Sbjct: 136 MIYGRNLHDVSIVG-KGLIDGNCAATFATWRARQKEGQTLSRRMNHEERPLAERNFGEGH 194
Query: 65 --RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
R L++L N+ I + NSPFW IH + NV+ +G+ A L N DGIDP+
Sbjct: 195 WLRPQLIQLFGCRNVTIEGVKIINSPFWCIHLLQSENVICRGLRYDAKL--VNNDGIDPE 252
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SS NV IED ++GDD VA+KSG D+ G A PS NII+RR V IGSEM
Sbjct: 253 SSRNVLIEDVSFDNGDDNVAIKSGRDNDGWTHAHPSENIIIRRCR--FKGLHAVVIGSEM 310
Query: 183 SGGIFNVTVDQLHVWD-AAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDH 241
SGG+ NV V+ G+ IKT+ RGGY++NI +++ + + V+ I + ++ +
Sbjct: 311 SGGVRNVFVEDCDFAGYCKRGLYIKTNPDRGGYVKNIYMKDCRFDEVEDLIYV---TSMY 367
Query: 242 PDEGWDPKALPKIRGISFVNVVSVNTTKAP--VLAGIIGTQFEEICMKNVSL 291
EG + ++ + V+ VS +A VL G ++ ++ V +
Sbjct: 368 AGEGLGSRHFSEVEHL-LVDGVSCRRARAAGIVLQGTKAKPIRDVTIRRVEI 418
>gi|403057563|ref|YP_006645780.1| polygalacturonase [Pectobacterium carotovorum subsp. carotovorum
PCC21]
gi|402804889|gb|AFR02527.1| putative polygalacturonase [Pectobacterium carotovorum subsp.
carotovorum PCC21]
Length = 460
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 119/211 (56%), Gaps = 24/211 (11%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWWNRTLKHT-------RGHLVELMNSNNILISNLTFRNS 87
NV ITG GTIDGQG +WW+ W ++ T R L+ + +S+N+L+ +T +S
Sbjct: 135 NVAITG-QGTIDGQGAVWWE-RWRENIRATGKKGGTDRPRLIYIKSSSNVLVDGVTLTHS 192
Query: 88 PFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGW 147
P + + Y +V + G IL+P +APNTD IDP S N+ I + YI+ DD +A+K+
Sbjct: 193 PSFHVVMRYSHDVDVNGTRILSPWHAPNTDAIDPIDSQNIRITNNYIDCNDDHIAIKA-- 250
Query: 148 DHYGIAMARPSS---NIIVRRV---SGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAA 201
+P S N +V + + G+ IGSE SGG+ NV V+ +
Sbjct: 251 -------EKPDSRFPNGVVDNIYIANNILKQGRGISIGSETSGGVNNVLVENNQFEGSMY 303
Query: 202 GVRIKTDKGRGGYIENITIRNIKMERVKIPI 232
G+RIKT +G+GG ++NIT RN KM V+IP+
Sbjct: 304 GIRIKTLRGKGGEVKNITYRNTKMVDVEIPL 334
>gi|50120129|ref|YP_049296.1| polygalacturonase [Pectobacterium atrosepticum SCRI1043]
gi|49610655|emb|CAG74100.1| putative polygalacturonase [Pectobacterium atrosepticum SCRI1043]
Length = 460
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 119/211 (56%), Gaps = 24/211 (11%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWWNRTLKHT-------RGHLVELMNSNNILISNLTFRNS 87
NV ITG GTIDGQG +WW+ W ++ T R L+ + +S+N+L+ +T +S
Sbjct: 135 NVAITG-QGTIDGQGAVWWE-RWRENIRATGKKGGTDRPRLIYIKSSSNVLVDGVTLTHS 192
Query: 88 PFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGW 147
P + + Y +V + G IL+P +APNTD IDP S N+ I + YI+ DD +A+K+
Sbjct: 193 PSFHVVMRYSHDVDVNGTRILSPWHAPNTDAIDPIDSQNIRITNNYIDCNDDHIAIKA-- 250
Query: 148 DHYGIAMARPSS---NIIVRRV---SGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAA 201
+P S N +V + + G+ IGSE SGG+ NV V+ +
Sbjct: 251 -------EKPDSRFPNGVVDNIYIANNILKQGRGISIGSETSGGVNNVLVENNQFEGSMY 303
Query: 202 GVRIKTDKGRGGYIENITIRNIKMERVKIPI 232
G+RIKT +G+GG ++NIT RN KM V+IP+
Sbjct: 304 GIRIKTLRGKGGEVKNITYRNTKMVDVEIPL 334
>gi|383113004|ref|ZP_09933785.1| hypothetical protein BSGG_0152 [Bacteroides sp. D2]
gi|382948911|gb|EFS29452.2| hypothetical protein BSGG_0152 [Bacteroides sp. D2]
Length = 444
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 154/327 (47%), Gaps = 65/327 (19%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTL------------------------- 61
LI+ N+ I G GT+DGQG+ WW ++ +
Sbjct: 114 LIYAVDAENITIKG-EGTLDGQGKKWWMEFFRVMIDLKDNGMRDINKYQPMWDAANDTTA 172
Query: 62 ---------------KHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMT 106
+ R ++ + + I + NSPFWT++P +C NV+IKG+T
Sbjct: 173 IYAETNKDYVTTLQRRFFRPLFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVIIKGIT 232
Query: 107 IL-APLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRR 165
I AP +PNTDG++P+S NV I DC+I GDD + +KSG D + P NI +
Sbjct: 233 IDNAP--SPNTDGVNPESCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITN 290
Query: 166 VSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIE-----NITI 220
+ + GV IGSEMSG + VT+ G+RIK+ +GRGG +E N+ +
Sbjct: 291 CTMLSGH-GGVVIGSEMSGSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVM 349
Query: 221 RNIKMERVKIPIRISRGSNDHPDEGWDPKA--LPKIRGISFVNVVSVNTTKAPV-LAGII 277
NIK E V + ++ S+ P E PK+ P R + ++ ++V K P+ + G+
Sbjct: 350 SNIKQEAVVLNLKYSK----MPAE---PKSERTPIFRNVH-ISGMTVTDVKTPIKIVGLE 401
Query: 278 GTQFEEICMKNVSLLGLAPSAKWQCQF 304
+I ++++ + G K +C F
Sbjct: 402 EAPISDIVLRDIHIQG----GKQKCIF 424
>gi|227114428|ref|ZP_03828084.1| putative polygalacturonase [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 460
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 119/211 (56%), Gaps = 24/211 (11%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWWNRTLKHT-------RGHLVELMNSNNILISNLTFRNS 87
NV ITG GTIDGQG +WW+ W ++ T R L+ + +S+N+L+ +T +S
Sbjct: 135 NVAITG-QGTIDGQGAVWWE-RWRENIRATGKKGGTDRPRLIYIKSSSNVLVDGVTLTHS 192
Query: 88 PFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGW 147
P + + Y +V + G IL+P +APNTD IDP S N+ I + YI+ DD +A+K+
Sbjct: 193 PSFHVVMRYSHDVDVNGTRILSPWHAPNTDAIDPIDSQNIRITNNYIDCNDDHIAIKA-- 250
Query: 148 DHYGIAMARPSS---NIIVRRV---SGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAA 201
+P S N +V + + G+ IGSE SGG+ NV V+ +
Sbjct: 251 -------EKPDSRFPNGVVDNIYIANNILKQGRGISIGSETSGGVNNVLVENNQFEGSMY 303
Query: 202 GVRIKTDKGRGGYIENITIRNIKMERVKIPI 232
G+RIKT +G+GG ++NIT RN KM V+IP+
Sbjct: 304 GIRIKTLRGKGGEVKNITYRNTKMVDVEIPL 334
>gi|423299813|ref|ZP_17277838.1| hypothetical protein HMPREF1057_00979 [Bacteroides finegoldii
CL09T03C10]
gi|408473622|gb|EKJ92144.1| hypothetical protein HMPREF1057_00979 [Bacteroides finegoldii
CL09T03C10]
Length = 450
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 100/322 (31%), Positives = 153/322 (47%), Gaps = 55/322 (17%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWW--------DLWWN-------------------- 58
LI+ N+ I G GT+DGQG+ WW DL N
Sbjct: 114 LIYAVDAENITIKG-EGTLDGQGKKWWMEFFRVMIDLKDNGMRDINKYQPMWDAANDTTA 172
Query: 59 ----------RTLKHT--RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMT 106
TL+ R ++ + I I + NSPFWT++P +C NV IKG+T
Sbjct: 173 IYAETNKDYVSTLQRRFFRPPFIQPIRCKEIKIEGVKIVNSPFWTVNPEFCDNVTIKGIT 232
Query: 107 ILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRV 166
I + +PNTDGI+P+S NV I DC+I GDD + +KSG D + P NI +
Sbjct: 233 I-DNVPSPNTDGINPESCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNC 291
Query: 167 SGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKME 226
+ + GV IGSEMSG + VT+ G+RIK+ +GRGG +E+I + NI M
Sbjct: 292 TMLSGH-GGVVIGSEMSGSVRKVTISNCIFDGTDRGIRIKSTRGRGGVVEDIRVSNIVMS 350
Query: 227 RVK-IPIRISRGSNDHPDEGWDPKA--LPKIRGISFVNVVSVNTTKAPV-LAGIIGTQFE 282
+K + ++ + P E PK+ P R + ++ ++V K P+ + G+
Sbjct: 351 NIKREAVVLNLKYSKMPAE---PKSERTPIFRNVH-ISGMTVTDVKTPIKIVGLEEAPIS 406
Query: 283 EICMKNVSLLGLAPSAKWQCQF 304
+I ++++ + G K +C F
Sbjct: 407 DIVLRDIHIQG----GKQKCIF 424
>gi|423298602|ref|ZP_17276658.1| hypothetical protein HMPREF1070_05323 [Bacteroides ovatus
CL03T12C18]
gi|392662345|gb|EIY55906.1| hypothetical protein HMPREF1070_05323 [Bacteroides ovatus
CL03T12C18]
Length = 446
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 101/327 (30%), Positives = 155/327 (47%), Gaps = 65/327 (19%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWW----------------------DLW-------- 56
LI+ N+ I G GT+DGQG+ WW LW
Sbjct: 114 LIYAVDAENITIKG-EGTLDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQPLWDAANDTTA 172
Query: 57 --------WNRTLKHT--RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMT 106
+ TL+ R ++ + + I + NSPFWT++P +C NV IKG+T
Sbjct: 173 IYAETNKDYVNTLQRRFFRPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGIT 232
Query: 107 IL-APLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRR 165
I AP +PNTDG++P+S NV I DC+I GDD + +KSG D + P NI +
Sbjct: 233 IDNAP--SPNTDGVNPESCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITN 290
Query: 166 VSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIE-----NITI 220
+ + GV IGSEMSG + VT+ G+RIK+ +GRGG +E N+ +
Sbjct: 291 CTMLSGH-GGVVIGSEMSGSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVM 349
Query: 221 RNIKMERVKIPIRISRGSNDHPDEGWDPKA--LPKIRGISFVNVVSVNTTKAPV-LAGII 277
NIK E V + ++ S+ P E PK+ P R + ++ ++V K P+ + G+
Sbjct: 350 SNIKQEAVVLNLKYSK----MPAE---PKSERTPIFRNVH-ISGMTVTNVKTPIKIVGLE 401
Query: 278 GTQFEEICMKNVSLLGLAPSAKWQCQF 304
+I ++++ + G K +C F
Sbjct: 402 EAPISDIVLRDIHIQG----GKQKCIF 424
>gi|361068131|gb|AEW08377.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|376338080|gb|AFB33585.1| hypothetical protein 2_7803_01, partial [Pinus cembra]
Length = 138
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/138 (45%), Positives = 87/138 (63%)
Query: 145 SGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVR 204
SGWD YGI RPSSNII+RRV G T T SG+ +GSEMSGGI V L ++++ G+R
Sbjct: 1 SGWDEYGITYGRPSSNIIIRRVIGQTHTSSGLALGSEMSGGIQGVHAQDLQIFNSRRGLR 60
Query: 205 IKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVS 264
IKT GRGGY+ ++ I N+ M+ V + I + DHPD+ +DP ALP I+ I+F +++
Sbjct: 61 IKTAPGRGGYVRDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALPDIQRITFKDIIG 120
Query: 265 VNTTKAPVLAGIIGTQFE 282
A + GI F+
Sbjct: 121 DEIKTAGSVEGIQNAPFK 138
>gi|380695284|ref|ZP_09860143.1| polygalacturonase (Pectinase) [Bacteroides faecis MAJ27]
Length = 438
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/322 (30%), Positives = 153/322 (47%), Gaps = 55/322 (17%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWW--------DLWWN-------------------- 58
LI+ N+ I G GT+DGQG+ WW DL N
Sbjct: 107 LIYAVDAENITIKG-EGTLDGQGKKWWMEFFRVMIDLKDNGMHDLNKYQPMWDAENDTTA 165
Query: 59 ----------RTLKHT--RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMT 106
TL+ R ++ + + I + NSPFWT++P +C NV IKG+T
Sbjct: 166 IYTETNKDYVSTLQRRFFRPPFIQPVRCKKVKIEGVKIVNSPFWTVNPEFCDNVTIKGIT 225
Query: 107 ILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRV 166
I + +PNTDGI+P+S NV I DC+I GDD + +KSG D + P NI +
Sbjct: 226 I-DNVPSPNTDGINPESCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNC 284
Query: 167 SGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKME 226
+ + GV IGSEMSG + VT+ G+RIK+ +GRGG +E+I + NI M
Sbjct: 285 TMLSGH-GGVVIGSEMSGSVRKVTISNCVFDGTERGIRIKSTRGRGGVVEDIRVSNIVMS 343
Query: 227 RVKI-PIRISRGSNDHPDEGWDPKA--LPKIRGISFVNVVSVNTTKAPV-LAGIIGTQFE 282
+K + ++ + P E PK+ P R + ++ ++V K P+ + G+
Sbjct: 344 NIKQEAVVLNLKYSPMPAE---PKSERTPIFRNVH-ISGMTVTDVKTPIKIVGLEEAPIS 399
Query: 283 EICMKNVSLLGLAPSAKWQCQF 304
+I ++++ + G K +C F
Sbjct: 400 DIVLRDIHIQG----GKQKCIF 417
>gi|336402515|ref|ZP_08583249.1| hypothetical protein HMPREF0127_00562 [Bacteroides sp. 1_1_30]
gi|335948128|gb|EGN09853.1| hypothetical protein HMPREF0127_00562 [Bacteroides sp. 1_1_30]
Length = 455
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/327 (31%), Positives = 155/327 (47%), Gaps = 65/327 (19%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWW--------DLWWN-------------------- 58
LI+ N+ I G GT+DGQG+ WW DL N
Sbjct: 114 LIYAVDAENITIKG-EGTLDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQPMWDAANDTTA 172
Query: 59 ----------RTLKHT--RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMT 106
TL+ R ++ + + I + NSPFWT++P +C NV IKG+T
Sbjct: 173 IYAETNKDYVNTLQRRFFRPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGIT 232
Query: 107 IL-APLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRR 165
I AP +PNTDG++P+S NV I DC+I GDD + +KSG D + P NI +
Sbjct: 233 IDNAP--SPNTDGVNPESCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITN 290
Query: 166 VSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIE-----NITI 220
+ + GV IGSEMSG + VT+ G+RIK+ +GRGG +E N+ +
Sbjct: 291 CTMLSGH-GGVVIGSEMSGSVCKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVM 349
Query: 221 RNIKMERVKIPIRISRGSNDHPDEGWDPKA--LPKIRGISFVNVVSVNTTKAPV-LAGII 277
NIK E V + ++ S+ P E PK+ P R + ++ ++V K P+ + G+
Sbjct: 350 SNIKQEAVVLNLKYSK----MPAE---PKSERTPIFRNVH-ISGMTVTNVKTPIKIVGLE 401
Query: 278 GTQFEEICMKNVSLLGLAPSAKWQCQF 304
+I ++++ + G K +C F
Sbjct: 402 EAPISDIVLRDIHIQG----GKQKCIF 424
>gi|325106070|ref|YP_004275724.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324974918|gb|ADY53902.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 552
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/257 (33%), Positives = 119/257 (46%), Gaps = 55/257 (21%)
Query: 22 GRHISLIHGDHLTNVIITGYNGTIDGQGQMWW-----DL----W---------------- 56
R+ S I G +++NV ITG G IDG G W DL W
Sbjct: 130 ARNESPIMGVNVSNVAITG-QGIIDGNGDAWRMVRTSDLTEYEWKAKIAKGEGILSEDKK 188
Query: 57 -WNRTLKHTRGH---------------------------LVELMNSNNILISNLTFRNSP 88
W + K+ RGH L+ L N N+L+ +TF+NSP
Sbjct: 189 RWYPSEKNKRGHDQNISFWLGPGVKLSDFEPVKDFLRPNLIVLNNCKNVLLEGVTFQNSP 248
Query: 89 FWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWD 148
W +HP+ C N+ ++G+ I P A N DG D +S NV +E C + GDD + +KSG D
Sbjct: 249 AWNVHPIMCENLTLRGLFIKNPDYAHNGDGADIESCKNVLVEHCIFDVGDDAICIKSGKD 308
Query: 149 HYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTD 208
G + N+I+R + G +GSEMSGG N+ V G+R KT
Sbjct: 309 EEGRKRGIATENVIIRN-NTVYKGHGGFVVGSEMSGGAKNIFVYDCTFMGTDKGIRFKTS 367
Query: 209 KGRGGYIENITIRNIKM 225
+GRGG +ENI I++I M
Sbjct: 368 RGRGGVVENIFIKDINM 384
>gi|299145498|ref|ZP_07038566.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
gi|298515989|gb|EFI39870.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
Length = 450
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/327 (31%), Positives = 155/327 (47%), Gaps = 65/327 (19%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWW--------DLWWN-------------------- 58
LI+ N+ I G GT+DGQG+ WW DL N
Sbjct: 114 LIYAVDTENITIKG-EGTLDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQPMWDAANDTTA 172
Query: 59 ----------RTLKHT--RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMT 106
TL+ R ++ + + I + NSPFWT++P +C NV IKG+T
Sbjct: 173 IYAETNKDYVNTLQRRFFRPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCNNVTIKGIT 232
Query: 107 IL-APLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRR 165
I AP +PNTDG++P+S NV I DC+I GDD + +KSG D + P NI +
Sbjct: 233 IDNAP--SPNTDGVNPESCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITN 290
Query: 166 VSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIE-----NITI 220
+ + GV IGSEMSG + VT+ G+RIK+ +GRGG +E N+ +
Sbjct: 291 CTMLSGH-GGVVIGSEMSGSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVM 349
Query: 221 RNIKMERVKIPIRISRGSNDHPDEGWDPKA--LPKIRGISFVNVVSVNTTKAPV-LAGII 277
NIK E V + ++ S+ P E PK+ P R + ++ ++V K P+ + G+
Sbjct: 350 SNIKQEAVVLNLKYSK----MPAE---PKSERTPIFRNVH-ISGMTVTNVKTPIKIVGLE 401
Query: 278 GTQFEEICMKNVSLLGLAPSAKWQCQF 304
+I ++++ + G K +C F
Sbjct: 402 EAPISDIVLRDIHIQG----GKQKCIF 424
>gi|294645183|ref|ZP_06722905.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294808093|ref|ZP_06766866.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|292639470|gb|EFF57766.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294444734|gb|EFG13428.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
Length = 455
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/327 (30%), Positives = 155/327 (47%), Gaps = 65/327 (19%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWW----------------------DLW-------- 56
LI+ N+ I G GT+DGQG+ WW +W
Sbjct: 114 LIYAVDAENITIKG-EGTLDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQSMWDAANDTTA 172
Query: 57 --------WNRTLKHT--RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMT 106
+ TL+ R ++ + + I + NSPFWT++P +C NV IKG+T
Sbjct: 173 IYAETNKDYVNTLQRRFFRPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGIT 232
Query: 107 IL-APLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRR 165
I AP +PNTDG++P+S NV I DC+I GDD + +KSG D + P NI +
Sbjct: 233 IDNAP--SPNTDGVNPESCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITN 290
Query: 166 VSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIE-----NITI 220
+ + GV IGSEMSG + VT+ G+RIK+ +GRGG +E N+ +
Sbjct: 291 CTMLSGH-GGVVIGSEMSGSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVM 349
Query: 221 RNIKMERVKIPIRISRGSNDHPDEGWDPKA--LPKIRGISFVNVVSVNTTKAPV-LAGII 277
NIK E V + ++ S+ P E PK+ P R + ++ ++V K P+ + G+
Sbjct: 350 SNIKQEAVVLNLKYSK----MPAE---PKSERTPIFRNVH-ISGMTVTNVKTPIKIVGLE 401
Query: 278 GTQFEEICMKNVSLLGLAPSAKWQCQF 304
+I ++++ + G K +C F
Sbjct: 402 EAPISDIVLRDIHIQG----GKQKCIF 424
>gi|69249564|ref|ZP_00605017.1| Glycoside hydrolase, family 28 [Enterococcus faecium DO]
gi|389869657|ref|YP_006377080.1| glycosyl hydrolase [Enterococcus faecium DO]
gi|68194111|gb|EAN08650.1| Glycoside hydrolase, family 28 [Enterococcus faecium DO]
gi|388534906|gb|AFK60098.1| glycosyl hydrolase [Enterococcus faecium DO]
Length = 317
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/210 (35%), Positives = 117/210 (55%), Gaps = 23/210 (10%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWWNRTLKH-TRGHLVE------------------LMNSN 75
+++I G G IDGQG WW+L+W + K TR + L ++
Sbjct: 103 DILIEG-KGIIDGQGDHWWELYWGKDQKSGTRAEYDQKGLRWIADYAIKRPRACLLYHAE 161
Query: 76 NILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIE 135
++++ +L F+ S FW + Y +V+++ + I+ + P+TDGID DSSTNV + +C +
Sbjct: 162 HVVVRDLIFQKSGFWNLQITYSNDVLVEKV-IIRNNDGPSTDGIDIDSSTNVRVYECDLA 220
Query: 136 SGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLH 195
GDD +A+KSG D G + R SS I V R + GV IGSE+S G+ +V + +
Sbjct: 221 CGDDCIAIKSGRDGNGARVNRKSSRIEVARCK--IRSGYGVTIGSEVSAGVSDVYIHDID 278
Query: 196 VWDAAAGVRIKTDKGRGGYIENITIRNIKM 225
+ + G+R+K+ K RGG IENI + N+ M
Sbjct: 279 FFQSDCGIRMKSSKERGGVIENIRVENLNM 308
>gi|260642326|ref|ZP_05415427.2| putative exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii
DSM 17565]
gi|260622463|gb|EEX45334.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 456
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/327 (30%), Positives = 155/327 (47%), Gaps = 65/327 (19%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWW----------------------DLW-------- 56
LI+ N+ I G GT+DGQG+ WW LW
Sbjct: 124 LIYAVDAENITIKG-EGTLDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQPLWDAANDTTA 182
Query: 57 --------WNRTLKHT--RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMT 106
+ TL+ R ++ + + I + NSPFWT++P +C NV IKG+T
Sbjct: 183 IYAETNKDYVNTLQRRFFRPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGIT 242
Query: 107 IL-APLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRR 165
I AP +PNTDG++P+S NV I DC+I GDD + +KSG D + P NI +
Sbjct: 243 IDNAP--SPNTDGVNPESCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITN 300
Query: 166 VSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIE-----NITI 220
+ + GV IGSEMSG + VT+ G+RIK+ +GRGG +E N+ +
Sbjct: 301 CTMLSGH-GGVVIGSEMSGSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVM 359
Query: 221 RNIKMERVKIPIRISRGSNDHPDEGWDPKA--LPKIRGISFVNVVSVNTTKAPV-LAGII 277
NIK E V + ++ S+ P E PK+ P R + ++ ++V K P+ + G+
Sbjct: 360 SNIKQEAVVLNLKYSK----MPAE---PKSERTPIFRNVH-ISGMTVTNVKTPIKIVGLE 411
Query: 278 GTQFEEICMKNVSLLGLAPSAKWQCQF 304
+I ++++ + G K +C F
Sbjct: 412 EAPISDIVLRDIHIQG----GKQKCIF 434
>gi|237720811|ref|ZP_04551292.1| polygalacturonase [Bacteroides sp. 2_2_4]
gi|229449646|gb|EEO55437.1| polygalacturonase [Bacteroides sp. 2_2_4]
Length = 455
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/327 (31%), Positives = 155/327 (47%), Gaps = 65/327 (19%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWW--------DLWWN-------------------- 58
LI+ N+ I G GT+DGQG+ WW DL N
Sbjct: 114 LIYAVDAENITIKG-EGTLDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQPMWDAANDTTA 172
Query: 59 ----------RTLKHT--RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMT 106
TL+ R ++ + + I + NSPFWT++P +C NV IKG+T
Sbjct: 173 IYAETNKDYVNTLQRRFFRPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGIT 232
Query: 107 IL-APLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRR 165
I AP +PNTDG++P+S NV I DC+I GDD + +KSG D + P NI +
Sbjct: 233 IDNAP--SPNTDGVNPESCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITN 290
Query: 166 VSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIE-----NITI 220
+ + GV IGSEMSG + VT+ G+RIK+ +GRGG +E N+ +
Sbjct: 291 CTMLSGH-GGVVIGSEMSGSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVM 349
Query: 221 RNIKMERVKIPIRISRGSNDHPDEGWDPKA--LPKIRGISFVNVVSVNTTKAPV-LAGII 277
NIK E V + ++ S+ P E PK+ P R + ++ ++V K P+ + G+
Sbjct: 350 SNIKQEAVVLNLKYSK----MPAE---PKSERTPIFRNVH-ISGMTVTNVKTPIKIVGLE 401
Query: 278 GTQFEEICMKNVSLLGLAPSAKWQCQF 304
+I ++++ + G K +C F
Sbjct: 402 EAPISDIVLRDIHIQG----GKQKCIF 424
>gi|298481339|ref|ZP_06999532.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298272543|gb|EFI14111.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 464
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/327 (30%), Positives = 155/327 (47%), Gaps = 65/327 (19%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWW----------------------DLW-------- 56
LI+ N+ I G GT+DGQG+ WW +W
Sbjct: 123 LIYAVDAENITIKG-EGTLDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQSMWDAANDTTA 181
Query: 57 --------WNRTLKHT--RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMT 106
+ TL+ R ++ + + I + NSPFWT++P +C NV IKG+T
Sbjct: 182 IYAETNKDYVNTLQRRFFRPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGIT 241
Query: 107 IL-APLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRR 165
I AP +PNTDG++P+S NV I DC+I GDD + +KSG D + P NI +
Sbjct: 242 IDNAP--SPNTDGVNPESCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITN 299
Query: 166 VSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIE-----NITI 220
+ + GV IGSEMSG + VT+ G+RIK+ +GRGG +E N+ +
Sbjct: 300 CTMLSGH-GGVVIGSEMSGSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVM 358
Query: 221 RNIKMERVKIPIRISRGSNDHPDEGWDPKA--LPKIRGISFVNVVSVNTTKAPV-LAGII 277
NIK E V + ++ S+ P E PK+ P R + ++ ++V K P+ + G+
Sbjct: 359 SNIKQEAVVLNLKYSK----MPAE---PKSERTPIFRNVH-ISGMTVTNVKTPIKIVGLE 410
Query: 278 GTQFEEICMKNVSLLGLAPSAKWQCQF 304
+I ++++ + G K +C F
Sbjct: 411 EAPISDIVLRDIHIQG----GKQKCIF 433
>gi|386819250|ref|ZP_10106466.1| endopolygalacturonase [Joostella marina DSM 19592]
gi|386424356|gb|EIJ38186.1| endopolygalacturonase [Joostella marina DSM 19592]
Length = 569
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 148/340 (43%), Gaps = 75/340 (22%)
Query: 23 RHISLIHGDHLTNVIITGYNGTIDGQGQMW------------WD--------------LW 56
R IS I+ ++ N+ ITG G IDG G W WD +W
Sbjct: 144 RCISPINAMNVENIAITG-KGVIDGNGDAWRPVKKGKMTSKQWDNLVASGGVLSEDGKIW 202
Query: 57 W------------------NRTLKHT--------RGHLVELMNSNNILISNLTFRNSPFW 90
+ N T K R +V ++N N +L+ TF+NSP W
Sbjct: 203 FPTKSSKKGFDSREYFNVPNLTKKEDLESVKDFLRPVMVSIVNCNKVLLDGPTFQNSPAW 262
Query: 91 TIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHY 150
IHP+ NV+I+ + + P + N DG+D +S NV I + + GDD + +KSG D
Sbjct: 263 NIHPLMSENVIIRNLKVRNPWYSQNGDGLDLESCKNVLIYNNTFDVGDDAICIKSGKDKD 322
Query: 151 GIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKG 210
G P+ N+IV+ + G IGSEMSGG+ N+ V + G+R K+ +G
Sbjct: 323 GRDRGIPTENVIVKN-NTVYHAHGGFVIGSEMSGGVKNINVSNCNFIGTDVGLRFKSTRG 381
Query: 211 RGGYIENITIRNIKMERVKIPIR-------------ISRGSNDHPDEGWDPKAL------ 251
RGG +ENI I +I M + IP I + + DE D + +
Sbjct: 382 RGGVVENIYISDINM--INIPTEAIRFNMFYSGNAPILEENQNAEDEQRDEQKVAVTEET 439
Query: 252 PKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 291
P + I N+++ N+ KA G+ E + ++N L
Sbjct: 440 PVFKNIYMKNIIATNSGKAAFFMGLPEKSLENVTLENAML 479
>gi|419957067|ref|ZP_14473133.1| glycoside hydrolase family protein [Enterobacter cloacae subsp.
cloacae GS1]
gi|388607225|gb|EIM36429.1| glycoside hydrolase family protein [Enterobacter cloacae subsp.
cloacae GS1]
Length = 430
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 113/219 (51%), Gaps = 23/219 (10%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWWN-------------RTLK------HTRGHLVELMNSN 75
NV ITG GTIDGQG +WW +W R L+ R + + S
Sbjct: 99 NVSITG-TGTIDGQGVIWWQRFWGDDERSGMVGDYSARGLRWVVDYDCQRPRNILVFESQ 157
Query: 76 NILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIE 135
NIL+ + T R S FW IH Y R + ++ + I + P+TDGID DS V IE C +
Sbjct: 158 NILLRDFTSRESGFWNIHLCYSRRIAVEAVQI-SNSAGPSTDGIDVDSCEQVRIERCIVS 216
Query: 136 SGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLH 195
DD + +KSG AR + +I++R T SG+ +GSE SGGI V ++
Sbjct: 217 CNDDNICIKSGRGREAAQKARTARDIVIR--GCTLNKGSGITLGSETSGGIERVLIEDNA 274
Query: 196 VWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRI 234
G RIK+ + RGG+I +IT++N+++ V+ P+ I
Sbjct: 275 FNGTGVGFRIKSARNRGGFIRDITVQNLRLTDVRFPVLI 313
>gi|420156232|ref|ZP_14663077.1| pectate lyase family protein [Clostridium sp. MSTE9]
gi|394757879|gb|EJF40876.1| pectate lyase family protein [Clostridium sp. MSTE9]
Length = 511
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/259 (35%), Positives = 132/259 (50%), Gaps = 13/259 (5%)
Query: 26 SLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKHTRGHL---VELMNSNNILISNL 82
SLI+G + V I G +GT++G G WWN K R + V L+N ++I + L
Sbjct: 180 SLIYGKDVQQVRIYG-DGTLNGSGMEGG--WWNEPKKKNRAYRPRNVSLVNCSDITVCGL 236
Query: 83 TFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVA 142
T +NS W IHP+Y N+ G+TI + ++PNTDG++P+S NV I C + GDD +A
Sbjct: 237 TSQNSAAWNIHPLYSSNLAFYGLTIQSDPDSPNTDGLNPESCENVEIVGCRFQVGDDCIA 296
Query: 143 VKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAG 202
+KSG RPS I VRR GV IGSE+S G+ +V V G
Sbjct: 297 IKSGKLFLSRRHLRPSRKITVRRCL-MEEGHGGVVIGSEISCGVQDVLVQNCLFRRTDRG 355
Query: 203 VRIKTDKGRG--GYIENITIRNIKMERVKIPIRISRGSNDHPDEGWD----PKALPKIRG 256
RIKT +GRG ++ + ++KME+V I+ + PD D +ALP
Sbjct: 356 FRIKTRRGRGSTSVVDGVRFSHVKMEQVSHCFVINMFYHCDPDGHSDLVQCKEALPVGAE 415
Query: 257 ISFVNVVSVNTTKAPVLAG 275
V ++++ A +AG
Sbjct: 416 TPAVQNITLSDICADEIAG 434
>gi|390956451|ref|YP_006420208.1| endopolygalacturonase [Terriglobus roseus DSM 18391]
gi|390411369|gb|AFL86873.1| endopolygalacturonase [Terriglobus roseus DSM 18391]
Length = 423
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 156/310 (50%), Gaps = 31/310 (10%)
Query: 1 MDEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITG---YNGTIDGQGQMWWDLWW 57
+D++P+ RE R ++L+H DH++N+ +TG G IDG G ++W++
Sbjct: 91 IDDYPL----------REDAKWRRVALLHADHVSNLRVTGGKTEGGIIDGSGDIFWEMAR 140
Query: 58 NRTLK--------HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILA 109
+ + R LV++ S ++ ++T +NSP + + +C + I I
Sbjct: 141 THRVPNDTSGSGGYPRPMLVDITESQHLTFDHITLQNSPMYNLTFFFCDGIKIDHTIIRN 200
Query: 110 PLN-APNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSG 168
P PNTDGIDP SS N+ I I++GDD +A+KSG + P ++ +
Sbjct: 201 PAKTGPNTDGIDPFSSKNIEISYVDIDTGDDDIALKSGLVERDPKIG-PVEHVYIH--DS 257
Query: 169 TTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERV 228
G+ +GSE++GGI +V V+ + + + AGVRIK+++ RG I ++ +NI+M V
Sbjct: 258 IFRHGHGLSVGSELAGGISDVRVENIVMENTDAGVRIKSNRTRGNDIHDLHYKNIQMTGV 317
Query: 229 KIPIRISRGSNDHPDEGWD-PKAL----PKIRGISFVNVVSVNTTKAPVLAGIIGTQFEE 283
PI+I+ P G D KA+ P+ IS N+ + A ++ GI +
Sbjct: 318 GQPIQITEYYPKWPAAGTDTAKAVDAHTPRFHDISLENITATGAKDA-IIIGIPEYPIQN 376
Query: 284 ICMKNVSLLG 293
+ + +S+ G
Sbjct: 377 LTLTKISISG 386
>gi|336314135|ref|ZP_08569056.1| endopolygalacturonase [Rheinheimera sp. A13L]
gi|335881648|gb|EGM79526.1| endopolygalacturonase [Rheinheimera sp. A13L]
Length = 479
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/326 (29%), Positives = 153/326 (46%), Gaps = 56/326 (17%)
Query: 27 LIHGDHLTNVIITGYNGTIDG--QGQMWWDLWWNRTLKHT-------------------- 64
LI+ N+ +TG G ++G G+ WW W KHT
Sbjct: 149 LIYAYQQQNIAVTG-EGILEGNASGENWWP--WKGVWKHTPWKLDPATDQKPGRDQLFAM 205
Query: 65 -----------------RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTI 107
R ++ +LI +T RNSPFW I+PV C++VVI+G+
Sbjct: 206 AEAGVPVEKRYLDNNRLRPPFIQPYGCERVLIEGVTIRNSPFWLINPVLCKDVVIRGVNC 265
Query: 108 LAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVS 167
++ PN+DG DP+S V IE+C ++GDD +A+KSG + G +A P ++++
Sbjct: 266 VS--FGPNSDGCDPESCQRVLIENCLFDTGDDCIALKSGRNAEGRRLATPIQQVVIQDCL 323
Query: 168 GTTPTCSGVGIGSEMSGGIFNVTVDQLHVW--DAAAGVRIKTDKGRGGYIENITIRNIKM 225
+ GV IGSE+SGG + + + + G+RIKT+ RGG IE I + +I++
Sbjct: 324 MKSGH-GGVVIGSEISGGAKQIFARRCRMSSPNLERGLRIKTNSVRGGLIEQIAVDDIEI 382
Query: 226 ERVKIPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVL-----AGIIGTQ 280
VK I I N + +EG LP+++ + N +A + AGI G Q
Sbjct: 383 GEVKDAIVI----NFYYEEGDAGNFLPEVKDLKISNFRVKKAQRAFEIRGLPRAGISGIQ 438
Query: 281 FEEICMKNVSLLGLAPSAKWQCQFVS 306
++ + SL L S+ ++ + VS
Sbjct: 439 MSDVSFEQASLGVLEHSSDFKLENVS 464
>gi|197105922|ref|YP_002131299.1| exo-poly-alpha-D-galacturonosidase [Phenylobacterium zucineum HLK1]
gi|196479342|gb|ACG78870.1| exo-poly-alpha-D-galacturonosidase [Phenylobacterium zucineum HLK1]
Length = 470
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 126/235 (53%), Gaps = 8/235 (3%)
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+ R ++ N+LI ++ R SPFW +HPV CRNV I+ + I + + PN DGIDP+
Sbjct: 212 YLRPPFIQPYRCTNVLIEGVSLRRSPFWQVHPVLCRNVTIRRLDINS--HGPNNDGIDPE 269
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S +V IEDC+ +GDD +A+ SG + G + P N+++R G+ IGS++
Sbjct: 270 SCDHVLIEDCFFSTGDDCIALNSGRNEDGRRVGVPCQNVVIRGCR-MADGHGGLTIGSQI 328
Query: 183 SGGIFNVTVD--QLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSND 240
SG + NV + +L D +R K + RGG +E + RN+++ +V+ R +
Sbjct: 329 SGHVRNVFAENCRLDSPDLDHAIRFKNNALRGGIVERVRYRNLEVGQVR---RAVVTVDF 385
Query: 241 HPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLA 295
+ +EG + + P +R + NV S + +A L G+ G +I + + G+A
Sbjct: 386 NYEEGANGRFKPVLRDVLIENVRSGRSRRAVDLQGLPGAPARDIRIVDCDFRGVA 440
>gi|295084333|emb|CBK65856.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
Length = 430
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/327 (31%), Positives = 155/327 (47%), Gaps = 65/327 (19%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWW--------DLWWN-------------------- 58
LI+ N+ I G GT+DGQG+ WW DL N
Sbjct: 89 LIYAVDAENITIKG-EGTLDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQPMWDAANDTTA 147
Query: 59 ----------RTLKHT--RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMT 106
TL+ R ++ + + I + NSPFWT++P +C NV IKG+T
Sbjct: 148 IYAETNKDYVNTLQRRFFRPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGIT 207
Query: 107 IL-APLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRR 165
I AP +PNTDG++P+S NV I DC+I GDD + +KSG D + P NI +
Sbjct: 208 IDNAP--SPNTDGVNPESCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITN 265
Query: 166 VSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIE-----NITI 220
+ + GV IGSEMSG + VT+ G+RIK+ +GRGG +E N+ +
Sbjct: 266 CTMLSGH-GGVVIGSEMSGSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVM 324
Query: 221 RNIKMERVKIPIRISRGSNDHPDEGWDPKA--LPKIRGISFVNVVSVNTTKAPV-LAGII 277
NIK E V + ++ S+ P E PK+ P R + ++ ++V K P+ + G+
Sbjct: 325 SNIKQEAVVLNLKYSK----MPAE---PKSERTPIFRNVH-ISGMTVTNVKTPIKIVGLE 376
Query: 278 GTQFEEICMKNVSLLGLAPSAKWQCQF 304
+I ++++ + G K +C F
Sbjct: 377 EAPISDIVLRDIHIQG----GKQKCIF 399
>gi|359414685|ref|ZP_09207150.1| Polygalacturonase [Clostridium sp. DL-VIII]
gi|357173569|gb|EHJ01744.1| Polygalacturonase [Clostridium sp. DL-VIII]
Length = 487
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/283 (33%), Positives = 140/283 (49%), Gaps = 26/283 (9%)
Query: 26 SLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKHT---RGHLVELMNSNNILISNL 82
SLI G ++ NV I G NG IDG + D WW K R ++ L+ NIL+ ++
Sbjct: 155 SLITGINVENVNIIG-NGIIDGNASI--DNWWFEAKKKRIAWRPRMIFLVGCKNILVESV 211
Query: 83 TFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVA 142
T +NSP WTIHP+ ++ + I P ++PNTDG+DP+S NV I GDD +A
Sbjct: 212 TVKNSPSWTIHPLMSEDLKFINLYIENPKDSPNTDGLDPESCKNVHILGVNFSVGDDCIA 271
Query: 143 VKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAG 202
+KSG PS +I +R + V +GSEMS GI N+ V+ + G
Sbjct: 272 IKSGKIFISKIKTMPSQHIYIRNCNMNFGH-GAVVLGSEMSSGINNIYVENCLFNETDRG 330
Query: 203 VRIKTDKGRG--GYIENITIRNIKMERVKIPIRIS-------RGSNDHPDEGWDPKAL-- 251
+RIKT +GRG I+ I RNIKM +V P I+ G ++ W + L
Sbjct: 331 IRIKTRRGRGDTAIIDEIYARNIKMNKVLTPFTINCFYFCDIDGKTEYV---WSKEKLPI 387
Query: 252 ----PKIRGISFVNVVSVNT-TKAPVLAGIIGTQFEEICMKNV 289
P I I N+ +N A + G+ + +++ M+N+
Sbjct: 388 DDKTPYIGNIYLQNITCLNAQVAAGFMYGLPERKIKKVKMENI 430
>gi|254444100|ref|ZP_05057576.1| Polygalacturonase superfamily [Verrucomicrobiae bacterium DG1235]
gi|198258408|gb|EDY82716.1| Polygalacturonase superfamily [Verrucomicrobiae bacterium DG1235]
Length = 476
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/238 (35%), Positives = 131/238 (55%), Gaps = 40/238 (16%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQM--WWDLW--------------WNRTLKH------- 63
LI+ TN+ +TG GT+DGQ + W D W NR +++
Sbjct: 150 LIYAFEQTNIAVTG-KGTLDGQASLDNWLD-WNVKSAPGGSKQIPARNRLIEYGAKGTPV 207
Query: 64 ----------TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNA 113
R + ++ +N+LI ++T NSP W IHPV RNV ++G+T+++ +
Sbjct: 208 DERVFGEGDFLRPNFLQPYRCDNVLIEDVTIINSPMWEIHPVLSRNVTVRGVTVVS--HG 265
Query: 114 PNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTC 173
N DG +P+SS +V IE+C ++GDD +A+KSG ++ G + PS NIIVR
Sbjct: 266 SNNDGCNPESSKDVLIENCVFDTGDDCIAIKSGRNNDGRRVNVPSENIIVRNCK-MKDGH 324
Query: 174 SGVGIGSEMSGGIFNVTVD--QLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVK 229
GV IGSE+SGG+ NV V+ ++ + +RIKT+ RGG IEN+ +R++++ VK
Sbjct: 325 GGVVIGSEISGGVRNVFVENCEMSSPNLDRALRIKTNSIRGGLIENVFVRDVEVGVVK 382
>gi|189463211|ref|ZP_03011996.1| hypothetical protein BACCOP_03924 [Bacteroides coprocola DSM 17136]
gi|189430190|gb|EDU99174.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 431
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/233 (36%), Positives = 115/233 (49%), Gaps = 9/233 (3%)
Query: 65 RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSS 124
R + L NIL+ T SPFW IHP+ NV IKG+ + + + PN DG DP+S
Sbjct: 176 RPQFINLYKCKNILLEGFTINRSPFWLIHPLLSENVTIKGVKMQS--HGPNNDGCDPESC 233
Query: 125 TNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSG 184
NV IEDC ++GDD +A+KSG D G P NIIVR +GV IGSE++G
Sbjct: 234 ENVLIEDCDFDTGDDCIAIKSGRDEDGRYWNIPCKNIIVRECR-MKDGHAGVAIGSEITG 292
Query: 185 GIFNVTVDQLHVWDAAAG--VRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
G NV V+ + +RIK++ RGG + N+ +RNI + K I H
Sbjct: 293 GCHNVWVENCRMDSPELDRIIRIKSNPMRGGNVANVFVRNITVGECKQSILGIEQKYWHV 352
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIG-TQFEEICMKNVSLLGL 294
DEG LP I N+ S + L G +Q I +K+ S G+
Sbjct: 353 DEG---PYLPLFENIHLENITSKKSQYVLHLDGFDDKSQIRNIYLKDCSFEGV 402
>gi|376338086|gb|AFB33588.1| hypothetical protein 2_7803_01, partial [Pinus mugo]
Length = 138
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 62/138 (44%), Positives = 88/138 (63%)
Query: 145 SGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVR 204
SGWD YGI RPSSNII+RRV G T T SG+ +GSEMSGGI V + ++++ G+R
Sbjct: 1 SGWDEYGITYGRPSSNIIIRRVIGETHTSSGLALGSEMSGGIKGVHAQDIQIFNSRRGLR 60
Query: 205 IKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVS 264
IKT GRGGY++++ I N+ M+ V + I + DHPD+ +DP ALP I+ I+F +++
Sbjct: 61 IKTAPGRGGYVKDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALPDIQRITFKDIIG 120
Query: 265 VNTTKAPVLAGIIGTQFE 282
A + GI F+
Sbjct: 121 DEIKTAGSVXGIQNAPFK 138
>gi|326797927|ref|YP_004315746.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326548691|gb|ADZ77076.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 455
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/234 (33%), Positives = 120/234 (51%), Gaps = 9/234 (3%)
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
H R ++ S N+L+ ++ NSPFWTIH +N++I+ + + A + N DG+DP+
Sbjct: 205 HLRPQFIQFNRSENVLLEGISITNSPFWTIHTYLSKNIIIRNLNVYA--HGHNNDGVDPE 262
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S NV IE+C + GDD +A+KSG + G + PS NII+R + + IGSE+
Sbjct: 263 MSQNVLIENCVFDQGDDAIAIKSGRNPEGWRLKAPSKNIIIRNCT-VKNGHQLIAIGSEL 321
Query: 183 SGGIFNVTVDQLHVWDAAA---GVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSN 239
SGGI NV VD V D A + IKT++ GGY+ NI N++ R+++ I
Sbjct: 322 SGGIENVFVDSCVVMDGAKLNHLLFIKTNERMGGYVRNIYASNLQAGRIELGILGIETDV 381
Query: 240 DHPDEGWDP---KALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVS 290
+ P + L I+ + NV + N + G E I +KNV
Sbjct: 382 LYQWRNLVPTVERRLTPIKDVYLNNVTAKNVQFVSRILGQKELPIENIVLKNVE 435
>gi|194015552|ref|ZP_03054168.1| glycoside hydrolase [Bacillus pumilus ATCC 7061]
gi|194012956|gb|EDW22522.1| glycoside hydrolase [Bacillus pumilus ATCC 7061]
Length = 463
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/250 (34%), Positives = 131/250 (52%), Gaps = 44/250 (17%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQG----------------------QMWWDLWWNRTLKHT 64
LI+ H N+ ITG GT+DG+G Q+ +D+ R
Sbjct: 144 LIYAHHAENIAITG-AGTLDGRGDEHHWWPWKYGTNGQPSQDRDRQLLFDMAEKRIPVEE 202
Query: 65 R----GH-----LVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPN 115
R GH ++ +LI +T ++SP W IHPV V+++G+ I+ + PN
Sbjct: 203 RVFGEGHYLRSSFIQPYQCQQVLIEGVTVKDSPMWQIHPVLSELVIVRGVHIIG--HGPN 260
Query: 116 TDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSG 175
TDG++P+S NV IEDCY ++GDD +A+KSG + G + PS NI++RR + G
Sbjct: 261 TDGVNPESCRNVLIEDCYFDNGDDCIAIKSGRNEDGRRIGIPSENIVIRR-NEMRDGHGG 319
Query: 176 VGIGSEMSGGIFNVTVDQLHVWDAA---AGVRIKTDKGRGGYIENI-----TIRNIKMER 227
V IGSE+SGG+ + + +V D+ +RIKT+ RGG IE+I T++++K E
Sbjct: 320 VTIGSEISGGVRYIYAEN-NVMDSPNLDRALRIKTNSVRGGTIEHIYFKNNTVKSLKHEV 378
Query: 228 VKIPIRISRG 237
V I + G
Sbjct: 379 VCIDMMYEEG 388
>gi|29349531|ref|NP_813034.1| exo-poly-alpha-D-galacturonosidase [Bacteroides thetaiotaomicron
VPI-5482]
gi|29341440|gb|AAO79228.1| exo-poly-alpha-D-galacturonosidase precursor [Bacteroides
thetaiotaomicron VPI-5482]
Length = 528
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 132/263 (50%), Gaps = 10/263 (3%)
Query: 34 TNVIITGYNGTIDGQGQMWWDLWWNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIH 93
+V++TG N +GQ ++ D W R ++ ++ S IL+ +TF+NSP W IH
Sbjct: 211 ASVLMTGQN---NGQKEIT-DEEWTYMKSWLRPVMLSIVKSKRILLEGVTFKNSPGWCIH 266
Query: 94 PVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIA 153
P+ C ++ + + + P + N D +D +S NV + +C+ ++GDD + +KSG D G
Sbjct: 267 PLSCESLTLNDVKVFNPWYSQNGDALDVESCKNVLVTNCFFDAGDDAICLKSGKDEDGRR 326
Query: 154 MARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGG 213
P N+I++ + G IGSEMSGG+ NV V G+R K+ +GRGG
Sbjct: 327 RGEPCENVIIKN-NTVLHGHGGFVIGSEMSGGVRNVYVSGCSFVGTDVGLRFKSTRGRGG 385
Query: 214 YIENITIRNIKMERVK---IPIRISRGSNDHPDEGWDP--KALPKIRGISFVNVVSVNTT 268
+ENI I NI M + + + + ND P+ + P R I NV+
Sbjct: 386 VVENIFIDNINMIDISNDALTMDLYYAVNDFPETPIPDVNEETPVFRNIYISNVLCRGAE 445
Query: 269 KAPVLAGIIGTQFEEICMKNVSL 291
+A G+ + I +KN+++
Sbjct: 446 RAVYFNGLPEMPLKNIFIKNMTV 468
>gi|383150861|gb|AFG57437.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150863|gb|AFG57438.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150865|gb|AFG57439.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150867|gb|AFG57440.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150869|gb|AFG57441.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150871|gb|AFG57442.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150873|gb|AFG57443.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150875|gb|AFG57444.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150877|gb|AFG57445.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150879|gb|AFG57446.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150881|gb|AFG57447.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150883|gb|AFG57448.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150885|gb|AFG57449.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150887|gb|AFG57450.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150889|gb|AFG57451.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150891|gb|AFG57452.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150893|gb|AFG57453.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
Length = 138
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 62/138 (44%), Positives = 88/138 (63%)
Query: 145 SGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVR 204
SGWD YGI RPSSNII+RRV G T T SG+ +GSEMSGGI V + ++++ G+R
Sbjct: 1 SGWDEYGITYGRPSSNIIIRRVIGETHTSSGLALGSEMSGGIKGVHAQDIQIFNSRRGLR 60
Query: 205 IKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVS 264
IKT GRGGY++++ I N+ M+ V + I + DHPD+ +DP ALP I+ I+F +++
Sbjct: 61 IKTAPGRGGYVKDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALPDIQRITFKDIIG 120
Query: 265 VNTTKAPVLAGIIGTQFE 282
A + GI F+
Sbjct: 121 DEIKTAGSVEGIQNAPFK 138
>gi|239628552|ref|ZP_04671583.1| glycoside hydrolase [Clostridiales bacterium 1_7_47_FAA]
gi|239518698|gb|EEQ58564.1| glycoside hydrolase [Clostridiales bacterium 1_7_47FAA]
Length = 695
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/234 (35%), Positives = 124/234 (52%), Gaps = 18/234 (7%)
Query: 65 RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSS 124
R + ++++ N+L+ +T SP W ++PV C NV ++G+ I A N DGIDP+SS
Sbjct: 179 RPNFIQVIGCENVLVEGVTLLRSPMWEVNPVLCTNVTVRGIHI--STKAANNDGIDPESS 236
Query: 125 TNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSG 184
V IED Y ++GDD +A+KSG + G A PS NII+R + G+ IGSE+SG
Sbjct: 237 NYVLIEDNYFDTGDDCIAIKSGRNADGRATNTPSQNIIIRN-NIFADGHGGITIGSEVSG 295
Query: 185 GIFNVTVD--QLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
G+ NV D Q + + +R KT+ RGG IENI +RN ++ V + +
Sbjct: 296 GVNNVFADNNQFNSPNLKYALRFKTNAVRGGIIENIYLRNTTIQSVSDAVVHATMLY--- 352
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEI-----CMKNVSL 291
+EG +P+ R I+ N+ S GI FE++ M+NV L
Sbjct: 353 EEGRHGDYMPQFRNITIENLKSTGGD-----FGIFVEAFEDVPVTGLVMRNVEL 401
>gi|361068129|gb|AEW08376.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
Length = 138
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 62/138 (44%), Positives = 88/138 (63%)
Query: 145 SGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVR 204
SGWD YGI RPSSNII+RRV G T T SG+ +GSEMSGGI V + ++++ G+R
Sbjct: 1 SGWDEYGITYGRPSSNIIIRRVIGQTHTSSGLSLGSEMSGGIKGVHAQDIQIFNSRRGLR 60
Query: 205 IKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVS 264
IKT GRGGY++++ I N+ M+ V + I + DHPD+ +DP ALP I+ I+F +++
Sbjct: 61 IKTAPGRGGYVKDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALPDIQRITFKDIIG 120
Query: 265 VNTTKAPVLAGIIGTQFE 282
A + GI F+
Sbjct: 121 DEIKTAGSVEGIQNAPFK 138
>gi|408501393|ref|YP_006865312.1| galacturan 1,4-alpha-galacturonidase [Bifidobacterium asteroides
PRL2011]
gi|408466217|gb|AFU71746.1| galacturan 1,4-alpha-galacturonidase [Bifidobacterium asteroides
PRL2011]
Length = 437
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 103/168 (61%), Gaps = 1/168 (0%)
Query: 65 RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSS 124
R L++ + + +T +NSPFWTIH VYC V I G+T+ P NA NTD +D DSS
Sbjct: 157 RPPLIQFWKCTAVKLKGITVQNSPFWTIHFVYCTQVTIDGVTVRNPANAINTDALDIDSS 216
Query: 125 TNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSG 184
TNV + + + GDD + +KSG G+ + +P++++ V+ + + G+ IGSE +G
Sbjct: 217 TNVAVSNSLFDVGDDAITLKSGSGPDGLRVNKPTAHVNVKDCT-ILASHGGIAIGSETAG 275
Query: 185 GIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPI 232
GI +V V++ G+R+K+ +GRGG I+ IT+R+++M+ PI
Sbjct: 276 GINDVNVEKCTFSGTQRGIRLKSRRGRGGTIKGITLRHLEMDHCWCPI 323
>gi|411100599|gb|AFW03783.1| Putative polygalacturonase [Enterobacteriaceae bacterium HS]
Length = 456
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/239 (33%), Positives = 121/239 (50%), Gaps = 12/239 (5%)
Query: 65 RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSS 124
R L++ +I + ++T +NSPFWT H VY R+++++G+ IL P +A NTD +D DSS
Sbjct: 180 RPPLLQFWKCRHIRLEDITLQNSPFWTCHTVYSRDIILRGVKILNPADAINTDAVDLDSS 239
Query: 125 TNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSG 184
++ IE C + GDD V +KSG G+ + P+ + V + G+ IGSE +G
Sbjct: 240 EDIVIEHCLFDVGDDAVTLKSGSGADGLRINLPTRGVTVSHCK-ILASHGGIAIGSETAG 298
Query: 185 GIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPDE 244
GI +VTV+ +R+K+ +GRGG I+NIT+ N+ M PI I +
Sbjct: 299 GIEDVTVNDCVFEGTQRAIRLKSRRGRGGTIKNITLSNLTMTGCWCPIVIG--------Q 350
Query: 245 GWDPKALPKIRGISFVNVVSVNTTKAPVLAG--IIGTQFEEICMKNVSLLGLAPSAKWQ 301
+ P LP R + T P + I Q +I ++GL P A Q
Sbjct: 351 YFAPGVLPAERDTTLSETAQPVTPMTPRIENVRIAHVQATDIRATAAFIVGL-PEAPIQ 408
>gi|386820345|ref|ZP_10107561.1| endopolygalacturonase [Joostella marina DSM 19592]
gi|386425451|gb|EIJ39281.1| endopolygalacturonase [Joostella marina DSM 19592]
Length = 514
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 156/327 (47%), Gaps = 51/327 (15%)
Query: 26 SLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKH--------------TRGHLVEL 71
+LI+ + NVII G G IDGQG+++WD +W+ R + +
Sbjct: 171 ALINVSNQENVIIDG-EGLIDGQGKVFWDYYWDLRKNEYEPKGLRWIVDYDAKRPRTILI 229
Query: 72 MNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPL--NAPNTDGIDPDSSTNVCI 129
+S NI + +L + + FWT+H +Y + + G+ I + + P+TDGID DSS V I
Sbjct: 230 SDSKNIALKDLNIQKAGFWTVHVLYSEKITVDGLIIKNNIGGHGPSTDGIDIDSSKWVLI 289
Query: 130 EDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVG---IGSEMSGGI 186
++C I+ DD +K+G D G + RP+ +++R G G +GSE +G I
Sbjct: 290 QNCDIDCNDDNFCLKAGRDWDGQRVNRPTEYVVIRNCIAR----KGAGLFTLGSETAGSI 345
Query: 187 FNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRG-----SNDH 241
+V V + + G+ IK+ RGG +E+I+++NI+M+ VK ++IS S
Sbjct: 346 RHVYVSNIKGLGTSNGLNIKSALTRGGTVEDISLQNIQMDSVKTFVKISMNWNPSYSYSK 405
Query: 242 PDEGWD-----------------PKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEI 284
EG+D K +P + IS N+ KA + G+ + E I
Sbjct: 406 LPEGYDIDSIPIHWKKLLKEVPASKGIPTFKNISLSNIDVKGAEKAMNVKGLENSIIENI 465
Query: 285 CMKNVSLL-----GLAPSAKWQCQFVS 306
+ +V + G++ S W + VS
Sbjct: 466 SLNDVHIEAKTAGGISYSKDWNLENVS 492
>gi|196228364|ref|ZP_03127231.1| glycoside hydrolase family 28 [Chthoniobacter flavus Ellin428]
gi|196227767|gb|EDY22270.1| glycoside hydrolase family 28 [Chthoniobacter flavus Ellin428]
Length = 456
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 139/311 (44%), Gaps = 45/311 (14%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQG--QMWWDLWWNRTL----------------------- 61
L++ NV ITG GT+DG Q WW WN
Sbjct: 137 LVYAFEQENVAITGA-GTLDGSASSQNWW--AWNERAPDKPALQAADRKQLDQQGADGTP 193
Query: 62 ---------KHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLN 112
R +E N+LI +T NSP W IHP C NV ++G+T+ +
Sbjct: 194 VAQRIFGAGHFLRPSFIEPYRCKNVLIEGVTIVNSPMWEIHPTLCTNVTVRGVTVHSL-- 251
Query: 113 APNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPT 172
N DG DP+S +V IEDC ++GDD +A+KSG ++ G + + NII+RR +
Sbjct: 252 GTNNDGCDPESCHDVLIEDCTFQTGDDCIAIKSGRNNDGRRVGVAAENIIIRRCT-MKDG 310
Query: 173 CSGVGIGSEMSGGIFNVTVD--QLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKI 230
GV IGSE+SGG+ NV V Q+ R K++ RGG IENI + +K+ RV
Sbjct: 311 HGGVTIGSEVSGGVRNVFVSDCQMDSPRLDRAFRFKSNAVRGGEIENIQVSQVKIGRVA- 369
Query: 231 PIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVS 290
R +EG P +R + NV + + + +++ +K+ +
Sbjct: 370 --RAVLSVEFDYEEGAHGPERPVLRHVRIENVTAESCGSVATITSFPAAVIDDVRLKDCT 427
Query: 291 LLGLAPSAKWQ 301
G+ +++ Q
Sbjct: 428 FHGVEAASRTQ 438
>gi|383120469|ref|ZP_09941197.1| hypothetical protein BSIG_2521 [Bacteroides sp. 1_1_6]
gi|382985005|gb|EES68560.2| hypothetical protein BSIG_2521 [Bacteroides sp. 1_1_6]
Length = 528
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 133/265 (50%), Gaps = 14/265 (5%)
Query: 34 TNVIITGYNGTIDGQGQMWWDLWWNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIH 93
+V++TG N +GQ ++ D W R ++ ++ S IL+ +TF+NSP W IH
Sbjct: 211 ASVLMTGQN---NGQKEIT-DEEWTYMKSWLRPVMLSIVKSKRILLEGVTFKNSPGWCIH 266
Query: 94 PVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIA 153
P+ C ++ + + + P + N D +D +S NV + +C+ ++GDD + +KSG D G
Sbjct: 267 PLSCESLTLNDVKVFNPWYSQNGDALDVESCKNVLVTNCFFDAGDDAICLKSGKDEDGRR 326
Query: 154 MARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGG 213
P N+I++ + G IGSEMSGG+ NV V G+R K+ +GRGG
Sbjct: 327 RGEPCENVIIKN-NTVLHGHGGFVIGSEMSGGVRNVYVSGCSFVGTDVGLRFKSTRGRGG 385
Query: 214 YIENITIRNIKMERVKIP-----IRISRGSNDHPDEGWDP--KALPKIRGISFVNVVSVN 266
+ENI I NI M + IP + + ND P+ + P R I NV+
Sbjct: 386 VVENIFIDNINM--IDIPNDALTMDLYYAVNDSPETPIPDVNEETPVFRNIYISNVLCRG 443
Query: 267 TTKAPVLAGIIGTQFEEICMKNVSL 291
+A G+ + I +KN+++
Sbjct: 444 AGRAVYFNGLPEMPLKNIFIKNMTV 468
>gi|15891800|ref|NP_357472.1| polygalacturonase-like protein [Agrobacterium fabrum str. C58]
gi|15160276|gb|AAK90257.1| polygalacturonase-like protein [Agrobacterium fabrum str. C58]
Length = 517
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 89/292 (30%), Positives = 143/292 (48%), Gaps = 29/292 (9%)
Query: 28 IHGDHLTNVIITGYNGTIDGQGQM--WWDLWWNRTLKHTRG-HLVELMNSNNILISNLTF 84
+H N++I G G +DG G WW W T + R + L++ + + T
Sbjct: 188 VHAIGADNLVIEG-RGILDGSGDKGDWWS-WPKETREGARRPRGLHLVSCHKTQLLGFTI 245
Query: 85 RNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVK 144
RN+ WTIHP C ++ G+TI+AP ++PNTDG +P+S NV I GDD +AVK
Sbjct: 246 RNAASWTIHPQGCEDLTAAGLTIIAPHDSPNTDGFNPESCRNVMISGVRFSVGDDCIAVK 305
Query: 145 SGW-------DHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVW 197
+G DH + +++R G G+ IGSEMSGG+ +VTV+ +
Sbjct: 306 AGKRGPDGEDDHLAETRGISVRHCLMQRGHG------GLVIGSEMSGGVHDVTVEDCDMI 359
Query: 198 DAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISR----GSNDHPDEGWDPKALPK 253
G+R+KT +GRGG + NIT+R + ++ V+ + + ++ H D P
Sbjct: 360 GTDRGLRLKTRRGRGGMVGNITMRRVLLDGVQTALSANAHYHCDADGHDDWVQSRNPAPV 419
Query: 254 IRGISFVNVVSVNTTK-------APVLAGIIGTQFEEICMKNVSLLGLAPSA 298
G FV+ ++V + A V G+ I ++N++++ PSA
Sbjct: 420 NDGTPFVDGITVEDVEIRNLAHAAGVFLGLPEAPIRNIVVRNLTIVSHDPSA 471
>gi|146311767|ref|YP_001176841.1| glycoside hydrolase family protein [Enterobacter sp. 638]
gi|145318643|gb|ABP60790.1| glycoside hydrolase, family 28 [Enterobacter sp. 638]
Length = 460
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/214 (36%), Positives = 116/214 (54%), Gaps = 24/214 (11%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWWNRTLKHT-------RGHLVELMNSNNILISNLTFRNS 87
NV I G GTIDGQG +WW+ W ++ T R L+ + S+N+LI +T +S
Sbjct: 135 NVAIVG-EGTIDGQGAVWWE-RWRENIRATGKKGGTDRPRLIYITRSHNVLIDGVTLTHS 192
Query: 88 PFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGW 147
P + + Y +V I G IL+P +APNTD IDP S N+ I + YI+ DD +A+K+
Sbjct: 193 PSFHVVTRYAHDVDINGTRILSPWHAPNTDAIDPIDSQNIRITNNYIDCNDDHIAIKA-- 250
Query: 148 DHYGIAMARPS------SNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAA 201
A P NI + + T G+ IGSE +GG+ NV V+ +
Sbjct: 251 -----EKADPRFPDGVVDNIYI--ANNTLKQGRGISIGSESAGGVNNVLVENNTFEGSMY 303
Query: 202 GVRIKTDKGRGGYIENITIRNIKMERVKIPIRIS 235
G+RIK+ +G+GG ++NI RN KM V++P+ S
Sbjct: 304 GIRIKSPRGKGGEVKNIVYRNTKMHNVEVPLVFS 337
>gi|329957312|ref|ZP_08297832.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328523025|gb|EGF50128.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 452
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 145/297 (48%), Gaps = 35/297 (11%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLW---------------------WNRTL---K 62
I+ TNV +TG GTIDG G + ++ W + R
Sbjct: 142 FIYAYQCTNVAVTG-KGTIDGNGSVTFNDWHAIQGPAVDRLRQMGIDSVPVYERVFGEGH 200
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+ R +++ N+L+ +L +SPFW IHPV+C NV ++ + I + N N DG DP+
Sbjct: 201 YLRPCMIQFYGCKNVLVEDLKIYDSPFWIIHPVFCDNVTVRNVYIDS--NNYNNDGCDPE 258
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SSTNV IE GDD +A+KSG D G + + + N+I+R + IGSEM
Sbjct: 259 SSTNVLIEGMDFNVGDDGIAIKSGRDQDGWRIGQATENVIIRNCHFAR---WAITIGSEM 315
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGG+ N+ ++ + G+ K++ RGGY EN+ +R I+ + V + I+ +N H
Sbjct: 316 SGGVRNIYIEDCKIDSCRNGIYFKSNLDRGGYFENLNMRRIEAD-VCLWGVINFRTNYHG 374
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLA-GIIGTQFEEICMKNVSLLGLAPSA 298
G + L R I +V ++A G+ + +I ++N++ + AP A
Sbjct: 375 YRGGNHPTL--FRNICIEDVTCNRVDSVALMANGLPEAKLYDITLRNIT-VKKAPKA 428
>gi|375100882|ref|ZP_09747145.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
gi|374661614|gb|EHR61492.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
Length = 485
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 83/234 (35%), Positives = 130/234 (55%), Gaps = 17/234 (7%)
Query: 65 RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSS 124
R + V+ S++IL+S +T NSP W IHPV NV++ G+T+ +P + PN+DG++P+SS
Sbjct: 223 RPNFVQFYRSSDILVSGVTLTNSPMWMIHPVLSENVIVDGVTLDSP-DGPNSDGVNPESS 281
Query: 125 TNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIV---RRVSGTTPTCSGVGIGSE 181
NV I + ++GDD +A+KSG + G + PS NI++ R G GV IGSE
Sbjct: 282 RNVVIRNSSFDNGDDCIAIKSGRNADGRRIGVPSENIVIHDNRMFDG----HGGVVIGSE 337
Query: 182 MSGGIFNVTVDQLHVWDAA---AGVRIKTDKGRGGYIENITIRNIKM-ERVKIPIRISRG 237
MSG + NV ++ +V D+ +RIKT+ RGG +E + R+ + E IR+
Sbjct: 338 MSGDVRNVFAER-NVMDSPRLDRALRIKTNSVRGGTVEGVYFRDNDIPEVADAVIRV--- 393
Query: 238 SNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 291
N H +EG P +RG+ NV SV A L G + ++ +++ +
Sbjct: 394 -NFHYEEGDTGDFTPTVRGLHIENVHSVGGEFALYLRGYERSPVTDVTIRDSTF 446
>gi|423213419|ref|ZP_17199948.1| hypothetical protein HMPREF1074_01480 [Bacteroides xylanisolvens
CL03T12C04]
gi|392693879|gb|EIY87109.1| hypothetical protein HMPREF1074_01480 [Bacteroides xylanisolvens
CL03T12C04]
Length = 450
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 101/327 (30%), Positives = 154/327 (47%), Gaps = 65/327 (19%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWW--------DLWWN-------------------- 58
LI+ N+ I G GT+DGQG+ WW DL N
Sbjct: 114 LIYAVDAENITIKG-EGTLDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQPMWDAANDTTA 172
Query: 59 ----------RTLKHT--RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMT 106
TL+ R ++ + + I + NSPFWT++P +C NV IKG+T
Sbjct: 173 IYAETNKDYVNTLQRRFFRPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGIT 232
Query: 107 IL-APLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRR 165
I AP +PNTDG++P+S NV I DC+I GDD + +KSG D + P NI +
Sbjct: 233 IDNAP--SPNTDGVNPESCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITN 290
Query: 166 VSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIE-----NITI 220
+ + GV IGSEMSG + VT+ G+RIK+ +GRGG +E N+ +
Sbjct: 291 CTMLSGH-GGVVIGSEMSGSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVM 349
Query: 221 RNIKMERVKIPIRISRGSNDHPDEGWDPKA--LPKIRGISFVNVVSVNTTKAPV-LAGII 277
NIK E V + ++ S+ P E PK+ P R + ++ ++V K P+ + G+
Sbjct: 350 SNIKQEAVVLNLKYSK----MPAE---PKSERTPIFRNVH-ISGMTVTNVKTPIKIVGLE 401
Query: 278 GTQFEEICMKNVSLLGLAPSAKWQCQF 304
+I ++++ + K +C F
Sbjct: 402 EAPISDIVLRDIHI----QEGKQKCIF 424
>gi|383641178|ref|ZP_09953584.1| glycoside hydrolase [Sphingomonas elodea ATCC 31461]
Length = 465
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 146/314 (46%), Gaps = 57/314 (18%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQG--QMWWDLW---WNRTLKH------------------ 63
L++ N+ ITG GT+DGQG + WW W W T+ H
Sbjct: 135 LVYARQQRNIAITG-EGTLDGQGSARHWWS-WKGPWGGTVDHGWREGMPDQRKARAILFE 192
Query: 64 ------------------TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGM 105
R V+ + N+LI + R +PFW IHPV CRN++++G+
Sbjct: 193 MAERRVPVEKRVFGEGSFLRPAFVQPYDCENVLIEGVKLRGAPFWQIHPVLCRNLIVRGV 252
Query: 106 TILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRR 165
+L + PN DG DP+S IE C ++GDD +A+ SG + G +A P+ NI++R
Sbjct: 253 DVLG--HGPNNDGCDPESVDGALIERCTFDTGDDCIAINSGRNEDGRRLAMPAQNILIRD 310
Query: 166 VSGTTPTCSGVGIGSEMSGG---IF--NVTVDQLHVWDAAAGVRIKTDKGRGGYIENITI 220
GV +GS++SGG IF +D +W A +R K + RGG +EN
Sbjct: 311 CR-MKEGHGGVVVGSQISGGARWIFAERCVMDSPDLWYA---IRFKNNALRGGLLENFFY 366
Query: 221 RNIKMERVKIPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQ 280
R+I + V R + + + +EG + + +P++R + + + N + G+ G
Sbjct: 367 RDIDVGTVS---RAAVTCDFNYEEGANGRFVPRLRNVVIERLRTKNAARVLDSQGLPGAP 423
Query: 281 FEEICMKNVSLLGL 294
+ +++ S G+
Sbjct: 424 VTGVTLRDCSFDGV 437
>gi|332666314|ref|YP_004449102.1| polygalacturonase [Haliscomenobacter hydrossis DSM 1100]
gi|332335128|gb|AEE52229.1| Polygalacturonase [Haliscomenobacter hydrossis DSM 1100]
Length = 778
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 121/242 (50%), Gaps = 21/242 (8%)
Query: 65 RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSS 124
R ++V L +L+ +TF+NSP WTIHP+ C ++ ++ + + P N D +D +S
Sbjct: 448 RPNMVSLSRCTQVLLEGITFQNSPAWTIHPLLCEHITLRDVIVRNPWYGQNNDALDLESC 507
Query: 125 TNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSG 184
N +E C ++GDD + +KSG D G P+ NIIVR + G IGSEMSG
Sbjct: 508 RNGLVEGCSFDTGDDGICIKSGRDAEGRKRGVPTENIIVRNCT-VFHGHGGFVIGSEMSG 566
Query: 185 GIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERV-------------KIP 231
G+ N+ V + G+R KT +GRGG +ENI + +I M + K P
Sbjct: 567 GVRNLFVSDCNFLGTDVGLRFKTARGRGGIVENIYVTDINMTNIPGEAILFDMYYMAKDP 626
Query: 232 IRISRGSNDHPDEGWDP--KALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV 289
+ ++ N P+ +P + P+ R N+V ++ G+ E+ +KN+
Sbjct: 627 VSLNGEKNVLPEMKAEPLGEGTPQFRNFHIKNIVCQGAETGILIRGL-----PEMPIKNI 681
Query: 290 SL 291
S+
Sbjct: 682 SI 683
>gi|340348164|ref|ZP_08671257.1| glycoside hydrolase [Prevotella dentalis DSM 3688]
gi|433652999|ref|YP_007296853.1| endopolygalacturonase [Prevotella dentalis DSM 3688]
gi|339607813|gb|EGQ12738.1| glycoside hydrolase [Prevotella dentalis DSM 3688]
gi|433303532|gb|AGB29347.1| endopolygalacturonase [Prevotella dentalis DSM 3688]
Length = 857
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 84/257 (32%), Positives = 132/257 (51%), Gaps = 19/257 (7%)
Query: 65 RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSS 124
R LV + IL+ LT NSPFW IHP+ N+ + G+T+ + PN DG DP++
Sbjct: 211 RPQLVNFNACDGILVEGLTLANSPFWVIHPLLSTNITVDGVTVTN--DGPNGDGCDPEAC 268
Query: 125 TNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSG 184
+NV I++C ++GDD +A+KSG ++ G RPS NII+R GV IGSE+SG
Sbjct: 269 SNVLIQNCTFDTGDDCIAIKSGRNNDGRLWNRPSENIIIRHCK-MKDGHGGVVIGSEISG 327
Query: 185 GIFNVTVDQLHVWDAAAG--VRIKTDKGRGGYIENITIRNIKMERV-KIPIRISRGSNDH 241
G NV + H+ +RIKT+ RGG IENI +RN+ + + + +RI+ +
Sbjct: 328 GCRNVFAEDCHMDSPHLDRVLRIKTNNCRGGVIENINMRNVTVGQCNEAVLRIN--LDYE 385
Query: 242 PDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAG-----------IIGTQFEEICMKNVS 290
P E P +R + NV S + + G + +F+ + + VS
Sbjct: 386 PREQCYRGFEPTVRRVYMENVTSRESKYGVQIIGLNNIENVSDVTVKNCRFDGVSRQPVS 445
Query: 291 LLGLAPSAKWQCQFVSG 307
+ G + ++ F++G
Sbjct: 446 ITGKTRNIRFDQLFING 462
>gi|374376182|ref|ZP_09633840.1| Exo-poly-alpha-galacturonosidase [Niabella soli DSM 19437]
gi|373233022|gb|EHP52817.1| Exo-poly-alpha-galacturonosidase [Niabella soli DSM 19437]
Length = 547
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 128/242 (52%), Gaps = 21/242 (8%)
Query: 65 RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSS 124
R +LV L + + +L+ +TF+NSP W +HP+ +N+ ++ + + P A N DGID +S
Sbjct: 216 RPNLVVLTSCDKVLLEGVTFQNSPAWCLHPLMSKNITVRNVFVKNPWYAQNGDGIDLESC 275
Query: 125 TNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSG 184
+NV IE+ + GDD + +KSG D G A P+ ++I+R + G +GSEMSG
Sbjct: 276 SNVLIENSKFDVGDDGLCMKSGRDADGRKRAMPTKDVIIRGCT-VYAAHGGFVVGSEMSG 334
Query: 185 GIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERV-------------KIP 231
G+ NV V + G+R KT +GRGG +ENI I++I M+ + K P
Sbjct: 335 GVNNVYVSNCTFIGSDIGLRFKTTRGRGGIVENIFIKDIFMKDIPGDAVLFDMYYMAKDP 394
Query: 232 IRISRGSNDHP--DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV 289
I ++ + P ++ + P+ R I N+ +A L G+ E+ +KN+
Sbjct: 395 IALAGEKRELPKVEKLAVDETTPQFRNIQISNIYVNGAQRAVFLRGL-----PEMAVKNI 449
Query: 290 SL 291
S+
Sbjct: 450 SI 451
>gi|255536015|ref|YP_003096386.1| glycoside hydrolase, family 28 [Flavobacteriaceae bacterium
3519-10]
gi|255342211|gb|ACU08324.1| glycoside hydrolase, family 28 [Flavobacteriaceae bacterium
3519-10]
Length = 491
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 137/258 (53%), Gaps = 14/258 (5%)
Query: 58 NRTL---KHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAP 114
NRT ++ R + +E N+LI +T N+PFW +HP+ +N+++ G+ I + + P
Sbjct: 224 NRTFGNGRYLRPNFIEPFECENVLIQGITIINAPFWILHPIKSKNIIVDGVNIRS--HGP 281
Query: 115 NTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCS 174
N DG+DP+ S NV I++ +GDD +A+K+G D G + + NIIVR
Sbjct: 282 NNDGLDPEYSQNVLIKNSIFNTGDDCIAIKAGRDEEGRRVGIMTENIIVRDCK-MIDGHG 340
Query: 175 GVGIGSEMSGGIFNVTVDQLHVW--DAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPI 232
GV IGSEMS G+ NV V H+ + +R+KT+ RGG ++ + ++N+ + VK +
Sbjct: 341 GVVIGSEMSAGVRNVFVYNNHMDSPELDRAIRLKTNNVRGGVVDGVYVKNLTVGEVKEAV 400
Query: 233 -RISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLA-GIIGTQFEEICMKNVS 290
I+ D+ + + P+IR I +V N K + A G+ ++ + I KNV+
Sbjct: 401 LHITMNYKDYKNRTGN--FTPQIRNILLEDVKVKNGGKYAIFADGLENSKIQNITFKNVT 458
Query: 291 LLGLAPSAKWQCQFVSGF 308
+ + A + +FV
Sbjct: 459 IDKV--KANFNVKFVENL 474
>gi|261880664|ref|ZP_06007091.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
gi|270332617|gb|EFA43403.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
Length = 851
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 96/313 (30%), Positives = 146/313 (46%), Gaps = 49/313 (15%)
Query: 28 IHGDHLTNVIITGYNGTIDGQG--QMWWDL------------------------------ 55
I+ T+V +TG GTIDG G Q WW +
Sbjct: 135 IYAYQATDVALTG-KGTIDGNGSKQTWWPMCGAPRYGFVKGETKEAQNLGSRAQLLKYAE 193
Query: 56 ----WWNRTL---KHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTIL 108
W R K R LV + S+ ILI +L NSPFW IHP+ +N+ + G +
Sbjct: 194 NDVPWDQRKFGMGKGLRSQLVNFVESDGILIKDLHLVNSPFWVIHPLLSKNITVDG--VF 251
Query: 109 APLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSG 168
+ PN DG DP++ V I++C ++GDD +A+KSG ++ G +PS NII+R
Sbjct: 252 VQNDGPNGDGCDPEACDGVLIQNCTFDTGDDCIAIKSGRNNDGRLWNKPSQNIIIRNCK- 310
Query: 169 TTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAG--VRIKTDKGRGGYIENITIRNIKME 226
GV IGSE+SGG NV + ++ +RIKT+ RGG IENI +RN+ +
Sbjct: 311 MADGHGGVVIGSEISGGCRNVFAEDCYMDSPHLDRVLRIKTNNCRGGLIENINMRNVTVG 370
Query: 227 RV-KIPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQ-FEEI 284
+ + +RI+ + P E P +R + NV S + + G+ + +I
Sbjct: 371 QCNEAVLRINL--DYEPREECYRGFEPTVRKVYMENVTSKESKYGVQIIGLNNIENVYDI 428
Query: 285 CMKNVSLLGLAPS 297
+KN G++ +
Sbjct: 429 TVKNCKFDGVSKA 441
>gi|262408002|ref|ZP_06084550.1| polygalacturonase [Bacteroides sp. 2_1_22]
gi|293369111|ref|ZP_06615706.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|336416263|ref|ZP_08596599.1| hypothetical protein HMPREF1017_03707 [Bacteroides ovatus
3_8_47FAA]
gi|345511524|ref|ZP_08791064.1| polygalacturonase [Bacteroides sp. D1]
gi|423286902|ref|ZP_17265753.1| hypothetical protein HMPREF1069_00796 [Bacteroides ovatus
CL02T12C04]
gi|262354810|gb|EEZ03902.1| polygalacturonase [Bacteroides sp. 2_1_22]
gi|292635823|gb|EFF54320.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|335938994|gb|EGN00873.1| hypothetical protein HMPREF1017_03707 [Bacteroides ovatus
3_8_47FAA]
gi|345454069|gb|EEO49839.2| polygalacturonase [Bacteroides sp. D1]
gi|392674440|gb|EIY67888.1| hypothetical protein HMPREF1069_00796 [Bacteroides ovatus
CL02T12C04]
Length = 450
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 154/327 (47%), Gaps = 65/327 (19%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWW----------------------DLW-------- 56
LI+ N+ I G GT+DGQG+ WW +W
Sbjct: 114 LIYAVDAENITIKG-EGTLDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQSMWDAANDTTA 172
Query: 57 --------WNRTLKHT--RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMT 106
+ TL+ R ++ + + I + NSPFWT++P +C NV IKG+T
Sbjct: 173 IYAETNKDYVNTLQRRFFRPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGIT 232
Query: 107 IL-APLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRR 165
I AP +PNTDG++P+S NV I DC+I GDD + +KSG D + P NI +
Sbjct: 233 IDNAP--SPNTDGVNPESCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITN 290
Query: 166 VSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIE-----NITI 220
+ + GV IGSEMSG + VT+ G+RIK+ +GRGG +E N+ +
Sbjct: 291 CTMLSGH-GGVVIGSEMSGSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVM 349
Query: 221 RNIKMERVKIPIRISRGSNDHPDEGWDPKA--LPKIRGISFVNVVSVNTTKAPV-LAGII 277
NIK E V + ++ S+ P E PK+ P R + ++ ++V K P+ + G+
Sbjct: 350 SNIKQEAVVLNLKYSK----MPVE---PKSERTPIFRNVH-ISGMTVTNVKTPIKIVGLE 401
Query: 278 GTQFEEICMKNVSLLGLAPSAKWQCQF 304
+I ++++ + K +C F
Sbjct: 402 EAPISDIVLRDIHI----QEGKQKCIF 424
>gi|160886115|ref|ZP_02067118.1| hypothetical protein BACOVA_04122 [Bacteroides ovatus ATCC 8483]
gi|156108928|gb|EDO10673.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
Length = 459
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 154/327 (47%), Gaps = 65/327 (19%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWW----------------------DLW-------- 56
LI+ N+ I G GT+DGQG+ WW +W
Sbjct: 123 LIYAVDAENITIKG-EGTLDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQSMWDAANDTTA 181
Query: 57 --------WNRTLKHT--RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMT 106
+ TL+ R ++ + + I + NSPFWT++P +C NV IKG+T
Sbjct: 182 IYAETNKDYVNTLQRRFFRPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGIT 241
Query: 107 IL-APLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRR 165
I AP +PNTDG++P+S NV I DC+I GDD + +KSG D + P NI +
Sbjct: 242 IDNAP--SPNTDGVNPESCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITN 299
Query: 166 VSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIE-----NITI 220
+ + GV IGSEMSG + VT+ G+RIK+ +GRGG +E N+ +
Sbjct: 300 CTMLSGH-GGVVIGSEMSGSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVM 358
Query: 221 RNIKMERVKIPIRISRGSNDHPDEGWDPKA--LPKIRGISFVNVVSVNTTKAPV-LAGII 277
NIK E V + ++ S+ P E PK+ P R + ++ ++V K P+ + G+
Sbjct: 359 SNIKQEAVVLNLKYSK----MPVE---PKSERTPIFRNVH-ISGMTVTNVKTPIKIVGLE 410
Query: 278 GTQFEEICMKNVSLLGLAPSAKWQCQF 304
+I ++++ + K +C F
Sbjct: 411 EAPISDIVLRDIHI----QEGKQKCIF 433
>gi|330836022|ref|YP_004410663.1| Polygalacturonase [Sphaerochaeta coccoides DSM 17374]
gi|329747925|gb|AEC01281.1| Polygalacturonase [Sphaerochaeta coccoides DSM 17374]
Length = 459
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 115/235 (48%), Gaps = 38/235 (16%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWWNRTLKHT------------------------------ 64
+V +TG G IDG G+ WW+ + H
Sbjct: 100 DVTVTG-TGVIDGSGKSWWESARRKRALHMKPETPMEKKLAALNPGYADQPGGGGGRQCQ 158
Query: 65 --RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
R L+++++S + + +T SPFWT+HPV+ + + + I+ P +APNTDGID D
Sbjct: 159 FLRPPLLQILDSTRVTVEGVTLTGSPFWTLHPVFSSGLTFRDVKIINPADAPNTDGIDID 218
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCS--GVGIGS 180
S +V + C ++ GDD +A+KSG GIA RP+ N+ RVSG T + G+ IGS
Sbjct: 219 SCQDVMVTGCLVDVGDDGIALKSGSGPDGIAAGRPTRNV---RVSGCTVRSAHGGIVIGS 275
Query: 181 EMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRIS 235
E + GI + + G+RIKT +GRGG I ++ + M P+ I+
Sbjct: 276 ETAAGISGLVAEDCLFDGTDRGIRIKTRRGRGGAISDLRFERLTMRNNLCPLAIN 330
>gi|266623864|ref|ZP_06116799.1| exo-poly-alpha-D-galacturonosidase [Clostridium hathewayi DSM
13479]
gi|288864322|gb|EFC96620.1| exo-poly-alpha-D-galacturonosidase [Clostridium hathewayi DSM
13479]
Length = 438
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/304 (31%), Positives = 141/304 (46%), Gaps = 50/304 (16%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWWNRTLKH-TRGHL------------------VELMNSN 75
+VII+G NGTIDGQG+ WW +W K RG V +M S+
Sbjct: 101 DVIISG-NGTIDGQGEYWWRKYWGDDGKSGMRGEYDKKGLRWACDYDCMRVRNVVIMESS 159
Query: 76 NILISNLTFRNSPFWTIHPVYCRNVVIKGMTILA-PLNAPNTDGIDPDSSTNVCIEDCYI 134
I + ++T S FW IH Y ++ + G+ I + +P+TDGID DS +V +E+C
Sbjct: 160 RITLKDITSMRSGFWNIHICYSDHIHVDGIKIASCGGESPSTDGIDIDSCHDVLVENCVT 219
Query: 135 ESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQL 194
+ DD + +KSG D GI + RP +I V+ GV IGSE+SGG++ +T+ L
Sbjct: 220 DCNDDSICIKSGRDADGIRVNRPCHDITVQNCE--IRAGFGVTIGSEVSGGVYQITLKNL 277
Query: 195 HVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSN----------DHPD- 243
G RIK+ R GYI ++ + + M VK P N D+
Sbjct: 278 RYHGTDCGFRIKSSVARHGYIRDVRVEGLSMVNVKYPFHFFLNWNPAYSYCELPGDYEGE 337
Query: 244 --EGWD------PKALP--KIRGISFVNVVSVNT------TKAPVLAGIIGTQFEEICMK 287
E W P ++P K+ I+ NV + N ++A + G E + K
Sbjct: 338 IPEHWKKLLEAIPDSVPKTKVSNITIENVTARNEADYNGISRAFHIEGFEDQPVEHVIFK 397
Query: 288 NVSL 291
NVSL
Sbjct: 398 NVSL 401
>gi|407688164|ref|YP_006803337.1| glycoside hydrolase family protein [Alteromonas macleodii str.
'Balearic Sea AD45']
gi|407291544|gb|AFT95856.1| glycoside hydrolase family 28 domain-containing protein
[Alteromonas macleodii str. 'Balearic Sea AD45']
Length = 488
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/316 (30%), Positives = 149/316 (47%), Gaps = 49/316 (15%)
Query: 15 RGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQM--WW--------DLWWN---RTL 61
G E +G + LI+ +N+ ITG GT+DG WW W +
Sbjct: 151 EGMELMG--YSPLIYAFEQSNIAITG-KGTLDGSAAKDNWWPWKGKWKASTWGDDPVENQ 207
Query: 62 KHTRGHLVELMNS------------------------NNILISNLTFRNSPFWTIHPVYC 97
K+TR L E++ + N+LI +T SPFW ++PV C
Sbjct: 208 KYTRDTLQEMVENGTPVSDRVFENNYLRPPFIQPYRCENVLIEGVTILRSPFWLVNPVLC 267
Query: 98 RNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARP 157
+NV + + PN+DG DP+S TNV I +C ++GDD +A+KSG + G + P
Sbjct: 268 KNVTVN--DVYCKSFGPNSDGCDPESCTNVLISNCTFDTGDDCIAIKSGRNADGRRVNVP 325
Query: 158 SSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQ--LHVWDAAAGVRIKTDKGRGGYI 215
SNI++ GV IGSE+SGG+ N+ + D G+RIKT+ RGG++
Sbjct: 326 CSNIVIEHCE-MKAGHGGVVIGSEISGGVENLYAQHCTMSSPDLDRGIRIKTNSIRGGHL 384
Query: 216 ENITIRNIKMERVKIPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAG 275
+N+ RNI + VK + + N +EG K P + I+ N+ + +A VL G
Sbjct: 385 KNLNYRNIDIGTVKDAVVV----NFFYEEGDAGKFPPLLEDITIENLNVASANRAFVLRG 440
Query: 276 IIGTQFEEICMKNVSL 291
T + + N+++
Sbjct: 441 YDHTPISGLTLNNITI 456
>gi|317503775|ref|ZP_07961787.1| glycoside hydrolase [Prevotella salivae DSM 15606]
gi|315665072|gb|EFV04727.1| glycoside hydrolase [Prevotella salivae DSM 15606]
Length = 856
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/219 (36%), Positives = 118/219 (53%), Gaps = 15/219 (6%)
Query: 65 RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSS 124
R L+ + N + +S +T NSPFW IHP+ C+NV + G+ I PN DG DP++
Sbjct: 210 RPQLINFVKGNRVRVSGVTLLNSPFWVIHPLQCKNVTVDGVKIWN--EGPNGDGCDPEAC 267
Query: 125 TNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSG 184
NV I++ + +GDD +A+KSG ++ G +PS NII+RR G+ IGSE+SG
Sbjct: 268 ENVLIQNTHFHTGDDCIAIKSGRNNDGRLWNQPSKNIIIRRCV-MEDGHGGIVIGSEISG 326
Query: 185 GIFNV-----TVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSN 239
G NV T+D H+ +RIKT+ RGG IENI +R +K+ + K + + +
Sbjct: 327 GCMNVFAEDCTMDSPHL---DRVLRIKTNNCRGGRIENINVRRVKVGQCKEAV-VKINLD 382
Query: 240 DHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIG 278
P E P++R VNV V K+ I+G
Sbjct: 383 YEPQEPCYRGFEPEVRN---VNVEQVTCQKSAYGVLIVG 418
>gi|251790610|ref|YP_003005331.1| glycoside hydrolase family 28 [Dickeya zeae Ech1591]
gi|247539231|gb|ACT07852.1| glycoside hydrolase family 28 [Dickeya zeae Ech1591]
Length = 467
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 118/214 (55%), Gaps = 24/214 (11%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWWNRTLKHT-------RGHLVELMNSNNILISNLTFRNS 87
NV ITG GTIDGQG +WW+ W ++ T R L+ + S+ +L+ +T NS
Sbjct: 142 NVAITG-EGTIDGQGAVWWE-RWREAIRATGKKGGTDRPRLIYITRSSQVLVDGVTLTNS 199
Query: 88 PFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGW 147
P + + Y R+V + G +I+AP +APNTD IDP S N+ I + I+ DD +A+K+
Sbjct: 200 PSFHVVMRYARDVTVNGTSIIAPWHAPNTDAIDPIDSQNIRITNNVIDCNDDHIAIKA-- 257
Query: 148 DHYGIAMARPSSNI---IVRRV---SGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAA 201
+P S +V V + G+ IGSE SGG+ NV V+ +
Sbjct: 258 -------EKPDSRFPDGVVDNVYIANNVLKQGRGISIGSETSGGVNNVLVENNRFEGSMY 310
Query: 202 GVRIKTDKGRGGYIENITIRNIKMERVKIPIRIS 235
G+RIK+ +G+GG ++N+T R+ +M V++P+ S
Sbjct: 311 GIRIKSLRGKGGEVKNVTYRHTRMVNVEVPLVFS 344
>gi|407700483|ref|YP_006825270.1| glycoside hydrolase family protein [Alteromonas macleodii str.
'Black Sea 11']
gi|407249630|gb|AFT78815.1| glycoside hydrolase family 28 domain-containing protein
[Alteromonas macleodii str. 'Black Sea 11']
Length = 488
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/316 (31%), Positives = 148/316 (46%), Gaps = 49/316 (15%)
Query: 15 RGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQM--WW--------DLWWN---RTL 61
G E +G + LI+ TN+ ITG GT+DG WW W +
Sbjct: 151 EGMELMG--YSPLIYAYEQTNIAITG-KGTLDGCAAKDNWWPWKGKWKASTWGDDPVENQ 207
Query: 62 KHTRGHLVELMNS------------------------NNILISNLTFRNSPFWTIHPVYC 97
K+TR L E++ N+LI +T SPFW ++PV C
Sbjct: 208 KYTRDTLQEMVERGTPVSERVFEKNYLRPPFIQPYRCENVLIEGVTILRSPFWLVNPVLC 267
Query: 98 RNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARP 157
+NV + + PN+DG DP+S TNV I +C ++GDD +A+KSG + G + P
Sbjct: 268 KNVTVN--DVYCKSFGPNSDGCDPESCTNVIISNCTFDTGDDCIAIKSGRNADGRRVNVP 325
Query: 158 SSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVD--QLHVWDAAAGVRIKTDKGRGGYI 215
SNII+ GV IGSE+SGG+ N+ + D G+RIKT+ RGG++
Sbjct: 326 CSNIIIEHCE-MKAGHGGVVIGSEISGGVENLYAQYCTMSSPDLDRGIRIKTNSIRGGHL 384
Query: 216 ENITIRNIKMERVKIPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAG 275
+N+ RNI + VK + + N +EG P + I+ N+ V+ +A VL G
Sbjct: 385 KNLNYRNIDIGTVKDAVVV----NFFYEEGDAGNFPPLLEDITIENLNVVSANRAFVLRG 440
Query: 276 IIGTQFEEICMKNVSL 291
T + + NV++
Sbjct: 441 YDHTPISGLTLNNVTI 456
>gi|284036172|ref|YP_003386102.1| glycoside hydrolase family protein [Spirosoma linguale DSM 74]
gi|283815465|gb|ADB37303.1| glycoside hydrolase family 28 [Spirosoma linguale DSM 74]
Length = 544
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 117/242 (48%), Gaps = 16/242 (6%)
Query: 65 RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSS 124
R +++ L IL+ +TF+NSP W +HP+ C ++ ++ +T P A N DG+D +S
Sbjct: 213 RPNMLSLTRCKRILLEGVTFQNSPAWCLHPLLCEDITLRRVTAKNPWYAQNGDGLDLESC 272
Query: 125 TNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSG 184
N ++DC + GDD + +KSG D G P+ NI VR S G IGSEMSG
Sbjct: 273 RNGLVDDCTFDVGDDGICIKSGRDEQGRKRGVPTENITVRN-SRVYHAHGGFVIGSEMSG 331
Query: 185 GIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERV-------------KIP 231
G+ N+ V G+R KT +GRGG +ENI + I M + K P
Sbjct: 332 GVKNLYVSNCTFMGTDVGLRFKTARGRGGVVENIFVDGIDMTDIAGEAILFDMYYAAKDP 391
Query: 232 IRISRGSNDHPDEGWDP--KALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV 289
+ SN+ P P +A P+ R NV A ++ G+ ++I ++N
Sbjct: 392 VPQQGESNELPVIQPQPLSEATPQFRSFQIRNVTCKGAETAILIRGLPEMAVKDILIENA 451
Query: 290 SL 291
L
Sbjct: 452 VL 453
>gi|380693857|ref|ZP_09858716.1| exo-poly-alpha-D-galacturonosidase [Bacteroides faecis MAJ27]
Length = 525
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 132/265 (49%), Gaps = 14/265 (5%)
Query: 34 TNVIITGYNGTIDGQGQMWWDLWWNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIH 93
+V++TG N GQ ++ D W R ++ ++ S IL+ +TF+NSP W IH
Sbjct: 211 ASVLMTGQNS---GQKEIT-DEEWIYMKSWLRPVMLSIVKSKRILLEGVTFKNSPGWCIH 266
Query: 94 PVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIA 153
P+ C ++ + + + P + N D +D +S NV + +C+ ++GDD + +KSG D G
Sbjct: 267 PLSCESLTLNDVKVFNPWYSQNGDALDVESCKNVLVTNCFFDAGDDAICLKSGKDEDGRR 326
Query: 154 MARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGG 213
P N+I++ + G IGSEMSGG+ NV V G+R K+ +GRGG
Sbjct: 327 RGEPCENVIIKN-NTVLHGHGGFVIGSEMSGGVRNVYVSGCSFVGTDVGLRFKSTRGRGG 385
Query: 214 YIENITIRNIKMERVKIP-----IRISRGSNDHPDEGWDP--KALPKIRGISFVNVVSVN 266
+ENI I NI M + IP + + ND P+ + P R I NV+
Sbjct: 386 VVENIFIDNINM--IDIPNDALTMDLYYAVNDSPETPIPDVNEETPVFRNIYISNVLCRG 443
Query: 267 TTKAPVLAGIIGTQFEEICMKNVSL 291
+A G+ + I +KN+++
Sbjct: 444 AGRAVYFNGLPEMPLKNILIKNMTV 468
>gi|325300479|ref|YP_004260396.1| Exo-poly-alpha-galacturonosidase [Bacteroides salanitronis DSM
18170]
gi|324320032|gb|ADY37923.1| Exo-poly-alpha-galacturonosidase [Bacteroides salanitronis DSM
18170]
Length = 493
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/273 (32%), Positives = 119/273 (43%), Gaps = 54/273 (19%)
Query: 5 PIIDPLPSYGRGRERLGGRHI-SLIHGDHLTNVIITGYNGTIDGQGQMW----------- 52
P ID P E L R S I G +LTNV ITG G IDG G W
Sbjct: 116 PDIDLYPLVETVFEGLDTRRCQSPISGRNLTNVAITG-QGAIDGNGHFWRPLKRQKVTES 174
Query: 53 -W-------------DLW--------------------------WNRTLKHTRGHLVELM 72
W D W W R +V L+
Sbjct: 175 QWKAATSRGGVYKRADYWFPYPGTLKGDTISNMNVPQNLKTEEEWQSIRPFLRPVMVSLI 234
Query: 73 NSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDC 132
N+ + + F+NSP W +HP+ C NV+I+ + + P A N DG+D +S N I +
Sbjct: 235 ECKNVWLEGVIFQNSPAWNLHPLMCENVLIENVEVRNPSYAQNGDGLDLESCRNALIVNS 294
Query: 133 YIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVD 192
+ GDD + +KSG D G ARP N+IV + G +GSEMSGG+ NV+V
Sbjct: 295 TFDVGDDGICLKSGKDEDGRRRARPCENVIVDGCT-VFKGHGGFVVGSEMSGGVRNVSVS 353
Query: 193 QLHVWDAAAGVRIKTDKGRGGYIENITIRNIKM 225
G+R K+ +GRGG +ENI +RN+ M
Sbjct: 354 NCQFLGTDVGLRFKSKRGRGGVVENIWVRNVSM 386
>gi|335034438|ref|ZP_08527786.1| polygalacturonase-like protein [Agrobacterium sp. ATCC 31749]
gi|333794034|gb|EGL65383.1| polygalacturonase-like protein [Agrobacterium sp. ATCC 31749]
Length = 517
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 141/287 (49%), Gaps = 33/287 (11%)
Query: 35 NVIITGYNGTIDGQGQM--WWDLWWNRT---LKHTRGHLVELMNSNNILISNLTFRNSPF 89
N++I G G +DG G WW W T + RG + L++ + T RN+
Sbjct: 195 NLVIEG-RGILDGSGDKGDWWS-WPKETRDGARRPRG--LHLVSCRKTQLLGFTIRNAAS 250
Query: 90 WTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGW-- 147
WTIHP C ++ G+TI+AP ++PNTDG +P+S NV I GDD +AVK+G
Sbjct: 251 WTIHPQGCEDLTAAGLTIIAPHDSPNTDGFNPESCRNVMISGVRFSVGDDCIAVKAGKRG 310
Query: 148 -----DHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAG 202
DH + +++R G G+ IGSEMSGG+ +VTV+ + G
Sbjct: 311 PDGEDDHLAETRGISVRHCLMQRGHG------GLVIGSEMSGGVHDVTVEDCDMIGTDRG 364
Query: 203 VRIKTDKGRGGYIENITIRNIKMERVKIPIRISR----GSNDHPDEGWDPKALPKIRGIS 258
+R+KT +GRGG + NIT+R + ++ V+ + + ++ H D P G
Sbjct: 365 LRLKTRRGRGGIVSNITMRRVLLDGVQTALSANAHYHCDADGHDDWVQSRNPAPVNDGTP 424
Query: 259 FVNVVSVNTTK-------APVLAGIIGTQFEEICMKNVSLLGLAPSA 298
FV+ ++V + A V G+ I ++N++++ PSA
Sbjct: 425 FVDGITVEDVEIRNLAHAAGVFLGLPEAPIRNIVVRNLTIVSHDPSA 471
>gi|376338082|gb|AFB33586.1| hypothetical protein 2_7803_01, partial [Pinus cembra]
Length = 138
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/138 (44%), Positives = 86/138 (62%)
Query: 145 SGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVR 204
SGWD YGI RPSSNII+RRV G T T SG+ +GSEMSGGI V L ++++ G+R
Sbjct: 1 SGWDEYGITYGRPSSNIIIRRVIGQTHTSSGLALGSEMSGGIQGVHAQDLQIFNSRRGLR 60
Query: 205 IKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVS 264
IKT GRGGY+ ++ I N+ M+ V + I + DHPD+ +DP AL I+ I+F +++
Sbjct: 61 IKTAPGRGGYVRDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALXDIQRITFKDIIG 120
Query: 265 VNTTKAPVLAGIIGTQFE 282
A + GI F+
Sbjct: 121 DEIKTAGSVXGIQNAPFK 138
>gi|281421112|ref|ZP_06252111.1| exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM 18205]
gi|281404647|gb|EFB35327.1| exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM 18205]
Length = 524
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 117/261 (44%), Gaps = 53/261 (20%)
Query: 23 RHISLIHGDHLTNVIITGYNGTIDGQGQMW------------W-------------DLW- 56
R S I G HLTNV ITG G IDG G+ W W D W
Sbjct: 134 RCQSPISGHHLTNVAITG-QGCIDGNGEYWRPLKKQKVTAAQWKQITSRGGAFKRADYWF 192
Query: 57 -------------------------WNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWT 91
WN + R ++ L+N N+ ++ + F+NSP W
Sbjct: 193 PSEGALKADNSANMNVPKTPASEEEWNEIKRFLRPVMISLVNCKNVWLNGVIFQNSPAWN 252
Query: 92 IHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYG 151
IHP+ C NV+I+ + + P A N DG+D +S N I + + GDD + +KSG D G
Sbjct: 253 IHPLMCENVLIEDVLVRNPSYAQNGDGLDLESCKNALIVNSTFDVGDDGICIKSGKDADG 312
Query: 152 IAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGR 211
P N+IV + G +GSEMSGG+ N+ V G+R K+ +GR
Sbjct: 313 RKRGIPCENVIVNGCT-VFKGHGGFVVGSEMSGGVKNIKVSDCQFLGTDVGLRFKSTRGR 371
Query: 212 GGYIENITIRNIKMERVKIPI 232
GG +ENI I N+ M ++ +
Sbjct: 372 GGIVENIYIDNMSMFDIQTDV 392
>gi|383752964|ref|YP_005431867.1| putative polygalacturonase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
gi|381365016|dbj|BAL81844.1| putative polygalacturonase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
Length = 494
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/238 (32%), Positives = 127/238 (53%), Gaps = 13/238 (5%)
Query: 68 LVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNV 127
++ NS +I I + NSPFW I+PV C NV IKG+ I L N DGIDP+SS NV
Sbjct: 229 FIQFYNSKDIRIMGVHIVNSPFWEINPVLCENVWIKGVHIETDLY--NNDGIDPESSRNV 286
Query: 128 CIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIF 187
IEDCY +GDD +A+KSG + G + P++N+I+R + G+ +GSE+SGG+
Sbjct: 287 LIEDCYFLTGDDCIAIKSGRNEDGRRIGVPTANVIIRH-NRFANGHGGITLGSEISGGVH 345
Query: 188 NV--TVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPDEG 245
+V T + + +R KT+ RGG +EN+ +++ + + ++ + ++ +EG
Sbjct: 346 DVFATGNHFDSPNLDYPIRFKTNAMRGGTLENVYVKDSVVNKARLAV---VHADFFYEEG 402
Query: 246 WDPKALPKIRGISF-----VNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSA 298
+ LP++ I+ S++ A L G E + +++ L G+ A
Sbjct: 403 HAGENLPQLDNITLDGFWTAEGGSIDAKYAFYLKGFADALIENVTFRDMKLEGVKGEA 460
>gi|224536236|ref|ZP_03676775.1| hypothetical protein BACCELL_01103 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522122|gb|EEF91227.1| hypothetical protein BACCELL_01103 [Bacteroides cellulosilyticus
DSM 14838]
Length = 456
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 144/297 (48%), Gaps = 35/297 (11%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLW---------------------WNRTL---K 62
I+ TNV +TG GTIDG G + ++ W + R
Sbjct: 142 FIYAYQCTNVALTG-KGTIDGNGAVTFNGWHALQGPALDRLRQMGIDSIPVYERVFGEGY 200
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+ R +++ N+L+ ++ +SPFW IHPV+C NV ++ + I + N N DG DP+
Sbjct: 201 YLRPCMIQFYGCKNVLVEDVQIYDSPFWIIHPVFCDNVTVRNVYIDS--NNYNNDGCDPE 258
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SSTNV IE+ GDD +A+KSG D G + + + N+I+R + IGSEM
Sbjct: 259 SSTNVLIENMDFNVGDDGIAIKSGRDQDGWRIGQATENVIIRNCHFAR---WAITIGSEM 315
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGG+ N+ ++ + G+ K++ RGGY EN+ +R I+ + V + I+ +N H
Sbjct: 316 SGGVRNIFIEDCKIDSCRNGIYFKSNLDRGGYFENLNMRRIEAD-VCLWGVINFRTNYHG 374
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLA-GIIGTQFEEICMKNVSLLGLAPSA 298
G + L R I +V ++A G+ + I ++N+ + AP A
Sbjct: 375 YRGGNHPTL--FRNICIEDVTCNRVDSVALMANGLPEAKLYNITLRNIK-VKQAPKA 428
>gi|423226065|ref|ZP_17212531.1| hypothetical protein HMPREF1062_04717 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392630583|gb|EIY24571.1| hypothetical protein HMPREF1062_04717 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 466
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 144/297 (48%), Gaps = 35/297 (11%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLW---------------------WNRTL---K 62
I+ TNV +TG GTIDG G + ++ W + R
Sbjct: 152 FIYAYQCTNVALTG-KGTIDGNGAVTFNGWHALQGPALDRLRQMGIDSIPVYERVFGEGY 210
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+ R +++ N+L+ ++ +SPFW IHPV+C NV ++ + I + N N DG DP+
Sbjct: 211 YLRPCMIQFYGCKNVLVEDVQIYDSPFWIIHPVFCDNVTVRNVYIDS--NNYNNDGCDPE 268
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SSTNV IE+ GDD +A+KSG D G + + + N+I+R + IGSEM
Sbjct: 269 SSTNVLIENMDFNVGDDGIAIKSGRDQDGWRIGQATENVIIRNCHFAR---WAITIGSEM 325
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGG+ N+ ++ + G+ K++ RGGY EN+ +R I+ + V + I+ +N H
Sbjct: 326 SGGVRNIFIEDCKIDSCRNGIYFKSNLDRGGYFENLNMRRIEAD-VCLWGVINFRTNYHG 384
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLA-GIIGTQFEEICMKNVSLLGLAPSA 298
G + L R I +V ++A G+ + I ++N+ + AP A
Sbjct: 385 YRGGNHPTL--FRNICIEDVTCNRVDSVALMANGLPEAKLYNITLRNIK-VKQAPKA 438
>gi|365122251|ref|ZP_09339156.1| hypothetical protein HMPREF1033_02502 [Tannerella sp.
6_1_58FAA_CT1]
gi|363642965|gb|EHL82299.1| hypothetical protein HMPREF1033_02502 [Tannerella sp.
6_1_58FAA_CT1]
Length = 561
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 96/178 (53%), Gaps = 3/178 (1%)
Query: 54 DLWWNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNA 113
D W R L+ ++ N+L+ +TF+NSP W +HP+ C NV I+ +T+ P +
Sbjct: 222 DEEWEEVKDFLRPVLLSFIDCTNVLLQGVTFQNSPSWNLHPLMCENVTIENLTVRNPWYS 281
Query: 114 PNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTC 173
N DG+D +S N + +C + GDD + +KSG D G P N+IV
Sbjct: 282 QNGDGLDIESCKNTIVTNCSFDVGDDGICIKSGKDADGRKRGIPCENVIVDNCV-VYHGH 340
Query: 174 SGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIP 231
G +GSEMSGG+ N++V G+R K+ +GRGG +ENI I+NI M + IP
Sbjct: 341 GGFVVGSEMSGGVKNISVSNCQFLGTDVGLRFKSTRGRGGVVENIFIKNIDM--INIP 396
>gi|334124103|ref|ZP_08498112.1| exo-poly-alpha-D-galacturonosidase [Enterobacter hormaechei ATCC
49162]
gi|333389102|gb|EGK60268.1| exo-poly-alpha-D-galacturonosidase [Enterobacter hormaechei ATCC
49162]
Length = 430
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/223 (33%), Positives = 113/223 (50%), Gaps = 29/223 (13%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWWNRTLKHTRGHLVE----------------------LM 72
NV ITG GTIDGQG +WW +W R +VE +
Sbjct: 99 NVSITG-TGTIDGQGAIWWQRFWG---DDERSGMVEDYSARGLRWVVDYDCQRPRNILIF 154
Query: 73 NSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDC 132
S IL+ + T R S FW +H Y R++ ++G+ I + P+TDGID DS V +E C
Sbjct: 155 ESQTILLRDFTSRESGFWNMHLCYSRHIEVEGVQI-SNSAGPSTDGIDIDSCEQVRVERC 213
Query: 133 YIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVD 192
+ DD + +KSG + AR + +I++R T SG+ +GSE SGGI V ++
Sbjct: 214 IVSCNDDNICIKSGRGYEAAQKARTARDIVIR--GCTLNKGSGITLGSETSGGIERVLIE 271
Query: 193 QLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRIS 235
G RIK+ + RGG+I +I ++N+++ V+ P+ I
Sbjct: 272 DNAFNGTGVGFRIKSARNRGGFIRDIIVQNLRLTDVRFPVLIQ 314
>gi|86143609|ref|ZP_01061994.1| exo-poly-alpha-D-galacturonosidase precursor [Leeuwenhoekiella
blandensis MED217]
gi|85830056|gb|EAQ48517.1| exo-poly-alpha-D-galacturonosidase precursor [Leeuwenhoekiella
blandensis MED217]
Length = 491
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/251 (31%), Positives = 134/251 (53%), Gaps = 28/251 (11%)
Query: 26 SLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKHT-------------RGHLVELM 72
+LI+ NV I G G +DGQG+++WD +WN ++ R L
Sbjct: 140 ALINVLDQKNVTIDG-EGLVDGQGKVYWDYYWNLREEYEPKGLRWIVDYDAKRPRTFLLQ 198
Query: 73 NSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPL--NAPNTDGIDPDSSTNVCIE 130
N+ N+ + +L + + FWT+ +Y ++ + G+TI + + P+TDGID DSS + ++
Sbjct: 199 NAENVFLKDLNIQRAGFWTVQVLYSNHITVDGLTIRNNIGGHGPSTDGIDIDSSKYILVQ 258
Query: 131 DCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVR---RVSGTTPTCSGVGIGSEMSGGIF 187
+C I+ DD +K+G D G+ + RP+ +++R ++G+ T IGSE SG I
Sbjct: 259 NCDIDCNDDNFCLKAGRDWDGLRVDRPTEYVVIRDCIALAGSGLTT----IGSETSGDIR 314
Query: 188 NVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRG-----SNDHP 242
+V V + G++IK+ RGG +E+I ++NIKM+ V +++S S
Sbjct: 315 HVFVSNIQGKGTKTGLKIKSATNRGGTVEDIHMQNIKMDSVGTFMQVSMNWNPSYSYSKL 374
Query: 243 DEGWDPKALPK 253
EG+D ++PK
Sbjct: 375 PEGYDYDSIPK 385
>gi|418938241|ref|ZP_13491792.1| glycoside hydrolase family 28 [Rhizobium sp. PDO1-076]
gi|375055025|gb|EHS51309.1| glycoside hydrolase family 28 [Rhizobium sp. PDO1-076]
Length = 503
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/282 (32%), Positives = 147/282 (52%), Gaps = 19/282 (6%)
Query: 26 SLIHGDHLTNVIITGYNGTIDGQGQM--WWDLWWNRTLKHTRG-HLVELMNSNNILISNL 82
SLI+ N+ ITG GTIDG G WW W T R + L + ++ +S +
Sbjct: 180 SLINAIDCQNLAITG-QGTIDGGGDRGDWW-TWPKETRDGARRPRTIFLSDCRHVTLSGI 237
Query: 83 TFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVA 142
T RNSP WTIHPV C +V+ G+TI +PNTDG++P++S+++ + I GDD +A
Sbjct: 238 TVRNSPSWTIHPVLCEHVLAVGLTIRNDPLSPNTDGLNPEASSDIRLIGLDISVGDDCIA 297
Query: 143 VKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAG 202
+K+G RP+ + +R V +GSEMS GI +V++ + H G
Sbjct: 298 IKAGKRDPRGGPDRPTRRVEIRNCL-MQLGHGAVVMGSEMSRGIHDVSISRCHFVGTDRG 356
Query: 203 VRIKTDKGRGGYIENITIRNIKMERVKIPIRI-------SRGSNDHPDEGWDPKAL---- 251
+RIKT +GRGG + +I + +M+ V PI + + G +++ + +P L
Sbjct: 357 LRIKTRRGRGGAVSDIHLSQCRMDGVATPIAVNAFYFCDADGRSEYV-QSRNPLPLSIET 415
Query: 252 PKIRGISFVN-VVSVNTTKAPVLAGIIGTQFEEICMKNVSLL 292
P+I I+ + VVS T A V G+ + + + + +S++
Sbjct: 416 PRISNITIRDVVVSGAETAAAVFYGLPECEIDAVSVDGLSIV 457
>gi|383642336|ref|ZP_09954742.1| glycoside hydrolase family 28 [Sphingomonas elodea ATCC 31461]
Length = 489
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 101/175 (57%), Gaps = 19/175 (10%)
Query: 65 RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSS 124
R HL++ N+L+ +++ R SPFWT+HP+ CR+V I+ ++I A + N DG+DP+ S
Sbjct: 212 RPHLIQFNRCRNVLVEDISIRGSPFWTLHPLLCRDVTIRRVSIQA--HGHNNDGVDPEMS 269
Query: 125 TNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSG 184
NV IEDC + GDD V+VKSG D +A P N++VR + +GSE+SG
Sbjct: 270 QNVLIEDCVFDQGDDAVSVKSGRDMDAWRLATPCRNVVVRNCR-VLNGHQLMAVGSELSG 328
Query: 185 GIFNVTVDQLH-VWDAAAG----------VRIKTDKGRGGYIENITIRNIKMERV 228
GI N+ VD H V D G + +KT++ RGGY +RN+ M RV
Sbjct: 329 GIENIWVDDCHFVGDGRGGDDHAVPINNLLYVKTNERRGGY-----VRNVHMSRV 378
>gi|388256014|ref|ZP_10133195.1| polygalacturonase, putative, pga28A [Cellvibrio sp. BR]
gi|387939714|gb|EIK46264.1| polygalacturonase, putative, pga28A [Cellvibrio sp. BR]
Length = 505
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 111/202 (54%), Gaps = 9/202 (4%)
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+ R ++ N+LI +T N+PFW ++PV C NV + G+ ++ + PN+DG DP+
Sbjct: 253 YLRPPFIQPYACKNVLIEGVTITNAPFWLLNPVLCENVTVDGVNCIS--HGPNSDGCDPE 310
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S NV I++C ++GDD +A+KSG + G + P+ NI++ GV IGSE+
Sbjct: 311 SCKNVVIKNCLFDTGDDCIAIKSGRNADGRRLNTPTENIVISHCK-MREGHGGVVIGSEI 369
Query: 183 SGGIFNVTVDQLHVW--DAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSND 240
SGG+ NV V+ + + G+RIKT+ RGG IEN IR+I + V I I
Sbjct: 370 SGGVRNVFVEHCEMSSPNLDRGIRIKTNSVRGGVIENFFIRDITIGEVTTAIVIDFDY-- 427
Query: 241 HPDEGWDPKALPKIRGISFVNV 262
+EG K P +R I N+
Sbjct: 428 --EEGDAGKFTPTVRNIDIRNL 447
>gi|409198539|ref|ZP_11227202.1| glycoside hydrolase [Marinilabilia salmonicolor JCM 21150]
Length = 531
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 138/289 (47%), Gaps = 28/289 (9%)
Query: 26 SLIHGDHLTNVIITGYNGTIDGQGQMW--WDLWWNRTL------------------KHTR 65
SLI+ ++ NV ITG G ++GQG+ W W R + R
Sbjct: 157 SLIYAKNIENVAITG-KGILEGQGEHWLKWGTVQPRATATKVPLSRRKNFGKGAGKEGMR 215
Query: 66 GHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSST 125
V S NI I +T R SP W IH +Y ++V++ +TI + + + N DGI DSS+
Sbjct: 216 PSFVVFWKSKNIFIEGITLRESPMWNIHLIYSSHIVVRDITINS-VESHNGDGIVLDSSS 274
Query: 126 NVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSG--TTPTCSGVGIGSEMS 183
+ +E ++ +GDD + +KSG++ G+ + P+ N+++R GV GSE S
Sbjct: 275 DALLEYNHLSTGDDAIVLKSGFNEEGLEINIPTENVVIRNYYAYDVRTGSGGVVFGSETS 334
Query: 184 GGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPD 243
GGI N+ V G+R KT +GRG ENI I +++M+ ++ + +
Sbjct: 335 GGIRNIYVHDALFEKCDRGIRFKTARGRGNITENIIISDVQMKNIR--YEAINFNTAYTG 392
Query: 244 EGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLL 292
G P P +R I NV A VL G+ E I M+N+S +
Sbjct: 393 AGVGPS--PLVRNIEIRNVKIDGVPNAIVLNGLPEKWIENIYMENISAI 439
>gi|358066336|ref|ZP_09152863.1| hypothetical protein HMPREF9473_04926 [Clostridium hathewayi
WAL-18680]
gi|356695387|gb|EHI57019.1| hypothetical protein HMPREF9473_04926 [Clostridium hathewayi
WAL-18680]
Length = 539
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 145/282 (51%), Gaps = 18/282 (6%)
Query: 26 SLIHGDHLTNVIITGYNGTIDGQGQMWWDLWW-NRTLKHT--RGHLVELMNSNNILISNL 82
++I G ++ NV++ G G I+G D WW N ++ R ++ L + ++++ +
Sbjct: 202 AIITGINVKNVVLYG-QGLIEGNAGYEEDNWWYNAKVRRIAFRPRMIFLNHCEHVVVQGI 260
Query: 83 TFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVA 142
+NSP W IHP + ++ +T+L P ++PNTDG+DP+S +V I Y GDD +A
Sbjct: 261 RVQNSPSWNIHPYFSNHLRFLDLTVLNPKDSPNTDGLDPESCKDVEIAGVYFSLGDDCIA 320
Query: 143 VKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAG 202
+KSG + G PS +I++R+ S + IGSEM+GG+ ++TV G
Sbjct: 321 IKSGKIYMGAKYRVPSEDIVIRQCCMRDGHGS-ITIGSEMAGGVKHLTVKDCLFLHTDRG 379
Query: 203 VRIKTDKGRG--GYIENITIRNIKMERVKIPIRISRGSNDHPD---EGWDPKAL------ 251
+RIKT +GRG I+ I +I+M+ V P I+ PD E K +
Sbjct: 380 LRIKTRRGRGEAAVIDGILFEHIRMDHVMTPFVINCFYYCDPDGHSEYVATKEMLPIDER 439
Query: 252 -PKIRGISFVNVVSVNT-TKAPVLAGIIGTQFEEICMKNVSL 291
P ++ + F N+ + N A L G+ + + + M+++ +
Sbjct: 440 TPYVKELVFRNIEASNCHVAAAYLYGLPEQKIDRVEMEHIHV 481
>gi|371940174|dbj|BAL45524.1| glycoside hydrolase [Bacillus licheniformis]
Length = 436
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/251 (33%), Positives = 126/251 (50%), Gaps = 46/251 (18%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQG--QMWWDLWWNR------TLKHTRGHLVELMNS---- 74
LI+ N+ ITG GT+DGQG + WW W R + + R L E+
Sbjct: 114 LIYAYEAENIAITG-KGTLDGQGDDEHWWP--WKRGTNGQSSQEKDRNALFEMAERGVPV 170
Query: 75 ---------------------NNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNA 113
+ILI +T NSP W +HPV C NV + G+ ++ +
Sbjct: 171 TERQFGKGHYLRPNFIQPYRCKDILIQGVTVLNSPMWQVHPVLCENVTVDGIKVIG--HG 228
Query: 114 PNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTC 173
PNTDG++P+S NV I+ C+ ++GDD +AVKSG + G + PS NI++ +
Sbjct: 229 PNTDGVNPESCKNVVIKGCHFDNGDDCIAVKSGRNADGRRINMPSENIVIEH-NEMKDGH 287
Query: 174 SGVGIGSEMSGGIFNVTVDQ--LHVWDAAAGVRIKTDKGRGGYIENI-----TIRNIKME 226
GV IGSE+SGG+ NV + + + +RIKT+ RGG +ENI T++++K E
Sbjct: 288 GGVTIGSEISGGVKNVIAEGNLMDSPNLDRALRIKTNSVRGGVLENIYFHKNTVKSLKRE 347
Query: 227 RVKIPIRISRG 237
+ I + G
Sbjct: 348 VIAIDMEYEEG 358
>gi|295095844|emb|CBK84934.1| Endopolygalacturonase [Enterobacter cloacae subsp. cloacae NCTC
9394]
Length = 430
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/219 (34%), Positives = 113/219 (51%), Gaps = 23/219 (10%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWWN-------------RTLK------HTRGHLVELMNSN 75
NV ITG GTIDGQG +WW +W R L+ R + + S
Sbjct: 99 NVSITG-TGTIDGQGVIWWQRFWGDDERSGMVGDYSARGLRWVVDYDCQRPRNILVFESQ 157
Query: 76 NILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIE 135
+IL+ + T R S FW +H Y R + ++G+ I + P+TDGID DS V +E C +
Sbjct: 158 SILLRDFTSRESGFWNMHLCYSRRITVEGVQI-SNSAGPSTDGIDIDSCEQVRVERCIVS 216
Query: 136 SGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLH 195
DD + +KSG AR + +I++R T SG+ +GSE SGGI V ++
Sbjct: 217 CNDDNICIKSGRGREAAQKARTARDIVIR--GCTLNKGSGITLGSETSGGIERVLIEDNA 274
Query: 196 VWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRI 234
G RIK+ + RGG+I +IT++N+ + V+ P+ I
Sbjct: 275 FNGTGVGFRIKSARNRGGFIRDITVQNLHLTDVRFPVLI 313
>gi|421725056|ref|ZP_16164257.1| glycoside hydrolase [Klebsiella oxytoca M5al]
gi|410374138|gb|EKP28818.1| glycoside hydrolase [Klebsiella oxytoca M5al]
Length = 460
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/214 (35%), Positives = 116/214 (54%), Gaps = 24/214 (11%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWWNRTLKHT-------RGHLVELMNSNNILISNLTFRNS 87
NV I G GTIDGQG +WW+ W ++ T R L+ + ++N+LI +T +S
Sbjct: 135 NVAIVG-EGTIDGQGAVWWE-RWRENIRATGKKGGTDRPRLIYITRASNVLIDGVTLTHS 192
Query: 88 PFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGW 147
P + + Y +V I G IL+P +APNTD IDP S N+ I + YI+ DD +A+K+
Sbjct: 193 PSFHVVTRYAHDVDINGTRILSPWHAPNTDAIDPIDSQNIRITNNYIDCNDDHIAIKA-- 250
Query: 148 DHYGIAMARPS------SNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAA 201
A P NI + + T G+ IGSE +GG+ NV V+ +
Sbjct: 251 -----EKADPRFPDGVVDNIYI--ANNTLKQGRGISIGSESAGGVNNVRVENNTFEGSMY 303
Query: 202 GVRIKTDKGRGGYIENITIRNIKMERVKIPIRIS 235
G+RIK+ +G+GG ++NI RN +M V++P+ S
Sbjct: 304 GIRIKSPRGKGGEVKNIVYRNTRMHNVEVPLVFS 337
>gi|225420387|ref|ZP_03762690.1| hypothetical protein CLOSTASPAR_06732 [Clostridium asparagiforme
DSM 15981]
gi|225040964|gb|EEG51210.1| hypothetical protein CLOSTASPAR_06732 [Clostridium asparagiforme
DSM 15981]
Length = 519
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 142/281 (50%), Gaps = 20/281 (7%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKHT---RGHLVELMNSNNILISNLT 83
LI G H+ NV I G GT++G + WW+ + R V L NI + LT
Sbjct: 183 LITGVHVKNVNIYG-EGTLNGNAS--HENWWHNCKEMKIAWRPRAVFLNGCENISLVGLT 239
Query: 84 FRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAV 143
+NSP WTIHP + ++ G+ +LAP ++ NTDG+DP+S V + + GDD +AV
Sbjct: 240 VKNSPSWTIHPYFSNHLRFLGLNVLAPKDSHNTDGLDPESCRQVELAGIHFSVGDDCIAV 299
Query: 144 KSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGV 203
KSG + G PS +I +R+ S S V IGSE+ G+ ++TV D G+
Sbjct: 300 KSGKIYMGKTYRTPSEHITIRQCSMNDGHGS-VVIGSEIGAGVRDLTVRDCIFKDTDRGL 358
Query: 204 RIKTDKGRGG--YIENITIRNIKMERVKIPIRISRGSNDHPD------EGWDP----KAL 251
RIKT +GRG ++ + NI+M+ V P ++ PD + +P +
Sbjct: 359 RIKTRRGRGEDCVVDRVAFENIRMDGVLTPFVVNCFYFCDPDGRTEYVQSKEPLPVDERT 418
Query: 252 PKIRGISFVNVVSVNTTKAPVLA-GIIGTQFEEICMKNVSL 291
P I+ +SF ++ + N A V A G+ + + +N+S+
Sbjct: 419 PSIQELSFKDIHAENAHYAAVCAYGLPEQKIGHLIFENISV 459
>gi|397656221|ref|YP_006496923.1| Polygalacturonase [Klebsiella oxytoca E718]
gi|394344836|gb|AFN30957.1| Polygalacturonase [Klebsiella oxytoca E718]
Length = 460
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/210 (35%), Positives = 116/210 (55%), Gaps = 16/210 (7%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWWNRTLKHT-------RGHLVELMNSNNILISNLTFRNS 87
NV I G GTIDGQG +WW+ W ++ T R L+ + ++N+LI +T +S
Sbjct: 135 NVAIVG-EGTIDGQGAVWWE-RWRENIRATGKKGGTDRPRLIYITRASNVLIDGVTLTHS 192
Query: 88 PFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGW 147
P + + Y +V I G IL+P +APNTD IDP S N+ I + YI+ DD +A+K+
Sbjct: 193 PSFHVVTRYAHDVDINGTRILSPWHAPNTDAIDPIDSQNIRITNNYIDCNDDHIAIKAEK 252
Query: 148 DHYGIAMARPSSNII--VRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRI 205
A R ++ + + T G+ IGSE +GG+ NV V+ + G+RI
Sbjct: 253 -----ADPRFPEGVVDNIYIANNTLKQGRGISIGSESAGGVNNVLVENNTFEGSMYGIRI 307
Query: 206 KTDKGRGGYIENITIRNIKMERVKIPIRIS 235
K+ +G+GG ++NI RN +M V++P+ S
Sbjct: 308 KSPRGKGGEVKNIVYRNTRMHNVEVPLVFS 337
>gi|384566069|ref|ZP_10013173.1| endopolygalacturonase [Saccharomonospora glauca K62]
gi|384521923|gb|EIE99118.1| endopolygalacturonase [Saccharomonospora glauca K62]
Length = 491
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/233 (36%), Positives = 127/233 (54%), Gaps = 15/233 (6%)
Query: 65 RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSS 124
R + V+ S+ IL+S +T NSP W IHPV NV++ G+T+ +P + PN+DG++P+SS
Sbjct: 221 RPNFVQFYRSSTILVSGVTLTNSPMWMIHPVLSENVLVDGVTLDSP-DGPNSDGVNPESS 279
Query: 125 TNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIV---RRVSGTTPTCSGVGIGSE 181
NV I + +GDD +AVKSG + G + PS NI++ R +G GV IGSE
Sbjct: 280 RNVVIRNSRFNNGDDCIAVKSGRNADGRRIGVPSENIVIHDNRMFAG----HGGVVIGSE 335
Query: 182 MSGGIFNVTVDQ--LHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIP-IRISRGS 238
MSG + NV ++ ++ +RIKT+ RGG +E + R+ + V IRI
Sbjct: 336 MSGDVRNVFAERNVMNSPHLDRALRIKTNSVRGGTVEGVYFRDNDVPAVADAVIRI---- 391
Query: 239 NDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 291
N H +EG P +RGI NV SV A L G + +I +++ +
Sbjct: 392 NFHYEEGDVGDFTPTVRGIHIDNVHSVGGEFALYLRGYERSPITDITIRDSTF 444
>gi|372223095|ref|ZP_09501516.1| glycoside hydrolase family protein [Mesoflavibacter
zeaxanthinifaciens S86]
Length = 472
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/232 (34%), Positives = 125/232 (53%), Gaps = 16/232 (6%)
Query: 65 RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSS 124
R +E N+LI ++T N+PFW +HP+ NVV+ G+T+ + + PN DG DP+ +
Sbjct: 218 RPTFIEPFGCENVLIKDITIINAPFWVVHPIKSNNVVVDGITVDS--HGPNNDGCDPEYA 275
Query: 125 TNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSG 184
NV I++C +GDD +A+KSG + G + PS NI+V GV +GSE+S
Sbjct: 276 KNVWIKNCVFNTGDDCIAIKSGRNEDGRRVNIPSENIVVEDCK-MIDGHGGVVMGSEISA 334
Query: 185 GIFNVTVD--QLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVK---IPIRISRGSN 239
G+ NV V Q+ + +RIKT+ RGG++EN+ +RNI + +VK + I + G
Sbjct: 335 GVRNVFVQNCQMDSPNLDRAIRIKTNTKRGGFVENVYVRNINVGQVKEAVLKINLHYGIY 394
Query: 240 DHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 291
+ +PK+ + N+ N K G++ +EE +KNV L
Sbjct: 395 GVQKGSF----MPKVSNVYLENIAVDNGGK----YGVLVNGYEESPVKNVFL 438
>gi|408789181|ref|ZP_11200887.1| polygalacturonase-like protein [Rhizobium lupini HPC(L)]
gi|408485004|gb|EKJ93352.1| polygalacturonase-like protein [Rhizobium lupini HPC(L)]
Length = 519
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 146/296 (49%), Gaps = 37/296 (12%)
Query: 28 IHGDHLTNVIITGYNGTIDGQGQM--WWDLWWNRT---LKHTRGHLVELMNSNNILISNL 82
+H N+II G G +DG G WW W T + RG + L++ I +
Sbjct: 190 VHAIGTDNLIIEG-RGVLDGSGDRGDWWS-WPKETRDGARRPRG--LHLVSCRKIQLLGF 245
Query: 83 TFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVA 142
T +N+ WTIHP C +++ G+TI AP ++PNTDG +P+S NV I GDD +A
Sbjct: 246 TIKNAASWTIHPQGCEDLIAAGLTINAPHDSPNTDGFNPESCRNVTISGVRFSVGDDCIA 305
Query: 143 VKSGW-------DHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLH 195
VK+G DH + ++ R G G+ IGSEMSGG+ +V+V+
Sbjct: 306 VKAGKRSPDGEDDHLAETRGIRVRHCLMERGHG------GLVIGSEMSGGVHDVSVEDCD 359
Query: 196 VWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPD-EGWDPKA---- 250
+ G+R+KT +GRGG + NI +R + ++ V+ +S ++ H D +G D +
Sbjct: 360 MVGTDRGLRLKTRRGRGGIVSNIAMRRVLLDGVQTA--LSANAHYHCDADGHDERVQSRQ 417
Query: 251 -LPKIRGISFVNVVSVNTTK-------APVLAGIIGTQFEEICMKNVSLLGLAPSA 298
P +G F++ + V + A V G+ + ++N++++ PSA
Sbjct: 418 PAPIDKGTPFIDGIIVEDVEIRNLAHAAGVFLGLPEAPIRNVAIRNLTIVSRDPSA 473
>gi|332533447|ref|ZP_08409312.1| glycoside hydrolase, family 77 [Pseudoalteromonas haloplanktis
ANT/505]
gi|332037156|gb|EGI73613.1| glycoside hydrolase, family 77 [Pseudoalteromonas haloplanktis
ANT/505]
Length = 474
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/238 (35%), Positives = 127/238 (53%), Gaps = 16/238 (6%)
Query: 60 TLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGI 119
T + R ++ NILI +T +NSPFW ++PV C++V + + + + PN+DG
Sbjct: 212 TGAYLRPPFIQPYKCKNILIQGVTIKNSPFWLMNPVLCKSVTVDKVNFSS--HGPNSDGC 269
Query: 120 DPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIG 179
DP+S +V I++C ++GDD +A+KSG + G + PS NI++ GV IG
Sbjct: 270 DPESCDHVHIKNCVFDTGDDCIAIKSGRNADGRRVGVPSQNIVIENCH-MKEGHGGVVIG 328
Query: 180 SEMSGGIFNV-----TVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRI 234
SE+SGG+ NV T+D H+ A +RIKT+ RGG IE+I IRN+ + VK + I
Sbjct: 329 SEISGGVNNVFVQNCTMDSPHLERA---IRIKTNSVRGGLIEHIRIRNVDVGTVKNAVVI 385
Query: 235 SRGSNDHPDEGWDPKALPKIRGISFVNVVSVNT-TKAPVLAGIIGTQFEEICMKNVSL 291
N + +EG + P +R I N+ N +KA L G +I KN
Sbjct: 386 ----NFYYEEGDAGQFDPTVRDIQIENLHCKNVLSKAFYLNGFERAPINDIHFKNCHF 439
>gi|423112756|ref|ZP_17100447.1| hypothetical protein HMPREF9689_00504 [Klebsiella oxytoca 10-5245]
gi|376390250|gb|EHT02936.1| hypothetical protein HMPREF9689_00504 [Klebsiella oxytoca 10-5245]
Length = 460
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/214 (35%), Positives = 116/214 (54%), Gaps = 24/214 (11%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWWNRTLKHT-------RGHLVELMNSNNILISNLTFRNS 87
NV I G GTIDGQG +WW+ W ++ T R L+ + ++N+LI +T +S
Sbjct: 135 NVAIVG-EGTIDGQGAVWWE-RWRENIRATGKKGGTDRPRLIYITRASNVLIDGVTLTHS 192
Query: 88 PFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGW 147
P + + Y +V I G IL+P +APNTD IDP S N+ I + YI+ DD +A+K+
Sbjct: 193 PSFHVVTRYAHDVDINGTRILSPWHAPNTDAIDPIDSQNIRITNNYIDCNDDHIAIKA-- 250
Query: 148 DHYGIAMARPS------SNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAA 201
A P NI + + T G+ IGSE +GG+ NV V+ +
Sbjct: 251 -----EKADPRFPDGVVDNIYI--ANNTLKQGRGISIGSESAGGVNNVLVENNTFEGSMY 303
Query: 202 GVRIKTDKGRGGYIENITIRNIKMERVKIPIRIS 235
G+RIK+ +G+GG ++NI RN +M V++P+ S
Sbjct: 304 GIRIKSPRGKGGEVKNIVYRNTRMHNVEVPLVFS 337
>gi|338211743|ref|YP_004655796.1| Exo-poly-alpha-galacturonosidase [Runella slithyformis DSM 19594]
gi|336305562|gb|AEI48664.1| Exo-poly-alpha-galacturonosidase [Runella slithyformis DSM 19594]
Length = 781
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 131/264 (49%), Gaps = 37/264 (14%)
Query: 65 RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSS 124
R +++ L N+L+ +TF+NSP WT+HP+ C +V I+ +T+ A N+D +D +S
Sbjct: 451 RPNMISLTRCKNVLLEGVTFQNSPAWTMHPLLCEHVSIRNVTVKNHWYAQNSDALDLESC 510
Query: 125 TNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSG 184
N +E C ++GDD + +KSG D G P+ N I++ G IGSEMSG
Sbjct: 511 RNGIVEGCTFDTGDDGITIKSGRDEQGRKRGVPTENFIIKDCK-VYHAHGGFVIGSEMSG 569
Query: 185 GIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERV-------------KIP 231
G+ N+ V + G+R KT +GRGG +E+I + ++ M + K P
Sbjct: 570 GVRNMFVSNCTFMGSDVGLRFKTARGRGGVVEDIYVTDVNMTEIPGEAILFDMYYAAKDP 629
Query: 232 IRISRGSNDHPDEGWDP--KALPK-------------------IRGISFVNVVSVNTTKA 270
+ SN+ P +P + P+ +RG+ +++ ++N A
Sbjct: 630 VPQEGESNELPAIKAEPLNEGTPQFKNFYLKNIICRGAETAILVRGLPEMSIKNINVENA 689
Query: 271 PVLA--GIIGTQFEEICMKNVSLL 292
+ A G++ + E I +KNV+LL
Sbjct: 690 VIEANKGLVCVEGENINLKNVTLL 713
>gi|375259243|ref|YP_005018413.1| glycoside hydrolase [Klebsiella oxytoca KCTC 1686]
gi|365908721|gb|AEX04174.1| glycoside hydrolase family protein [Klebsiella oxytoca KCTC 1686]
Length = 460
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/210 (35%), Positives = 116/210 (55%), Gaps = 16/210 (7%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWWNRTLKHT-------RGHLVELMNSNNILISNLTFRNS 87
NV I G GTIDGQG +WW+ W ++ T R L+ + ++N+LI +T +S
Sbjct: 135 NVAIVG-EGTIDGQGAVWWE-RWRENIRATGKKGGTDRPRLIYITRASNVLIYGVTLTHS 192
Query: 88 PFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGW 147
P + + Y +V I G IL+P +APNTD IDP S N+ I + YI+ DD +A+K+
Sbjct: 193 PSFHVVTRYAHDVDINGTRILSPWHAPNTDAIDPIDSQNIRITNNYIDCNDDHIAIKAEK 252
Query: 148 DHYGIAMARPSSNII--VRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRI 205
A R ++ + + T G+ IGSE +GG+ NV V+ + G+RI
Sbjct: 253 -----ADPRFPEGVVDNIYIANNTLKQGRGISIGSESAGGVNNVLVENNTFEGSMYGIRI 307
Query: 206 KTDKGRGGYIENITIRNIKMERVKIPIRIS 235
K+ +G+GG ++NI RN +M V++P+ S
Sbjct: 308 KSPRGKGGEVKNIVYRNTRMHNVEVPLVFS 337
>gi|167765390|ref|ZP_02437503.1| hypothetical protein BACSTE_03778 [Bacteroides stercoris ATCC
43183]
gi|167697018|gb|EDS13597.1| polygalacturonase (pectinase) [Bacteroides stercoris ATCC 43183]
Length = 452
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 143/297 (48%), Gaps = 35/297 (11%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLW---------------------WNRTL---K 62
I+ TNV +TG GTIDG G + ++ W + R
Sbjct: 142 FIYAYQCTNVAVTG-KGTIDGNGSVTFNGWHAIQGPAVDRLRQMGIDSVPVYQRVFGEGH 200
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+ R +++ N+L+ +L +SPFW IHPV+C NV ++ + I + N N DG DP+
Sbjct: 201 YLRPCMIQFYGCKNVLVEDLKIYDSPFWIIHPVFCDNVTVRNVYIDS--NNYNNDGCDPE 258
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S TNV IE GDD +A+KSG D G + + + N+I+R + +GSEM
Sbjct: 259 SCTNVLIEGMDFNVGDDGIAIKSGRDQDGWRIGQATENVIIRNCHFAR---WAITVGSEM 315
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGG+ N+ ++ + G+ K++ RGGY EN+ +R I+ + V + I+ +N H
Sbjct: 316 SGGVRNIYIEDCKIDSCRNGIYFKSNPDRGGYFENLNMRRIEAD-VCLWGVINFRTNYHG 374
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLA-GIIGTQFEEICMKNVSLLGLAPSA 298
G + L R I +V ++A G+ + I ++N++ + AP A
Sbjct: 375 YRGGNHPTL--FRNICIEDVTCNRVDSVALMANGLPEAKLHNITLRNIN-VKKAPKA 428
>gi|298385027|ref|ZP_06994586.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
gi|298262171|gb|EFI05036.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
Length = 528
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 132/265 (49%), Gaps = 14/265 (5%)
Query: 34 TNVIITGYNGTIDGQGQMWWDLWWNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIH 93
+V++TG N +GQ ++ D W R ++ ++ S IL+ +TF+NSP W IH
Sbjct: 211 ASVLMTGQN---NGQKEIT-DEEWTYMKSWLRPVMLSIVKSKRILLEGVTFKNSPGWCIH 266
Query: 94 PVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIA 153
P+ C ++ + + + P + N D +D +S NV + +C+ ++GDD + +KSG D G
Sbjct: 267 PLSCESLTLNDVKVFNPWYSQNGDALDVESCKNVLVTNCFFDAGDDAICLKSGKDEDGRR 326
Query: 154 MARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGG 213
N+I++ + G IGSEMSGG+ NV V G+R K+ +GRGG
Sbjct: 327 RGESCENVIIKN-NTVLHGHGGFVIGSEMSGGVRNVYVSGCSFVGTDVGLRFKSTRGRGG 385
Query: 214 YIENITIRNIKMERVKIP-----IRISRGSNDHPDEGWDP--KALPKIRGISFVNVVSVN 266
+ENI I NI M + IP + + ND P+ + P R I NV+
Sbjct: 386 VVENIFIDNINM--IDIPNDALTMDLYYAVNDFPETPIPDVNEETPVFRNIYISNVLCRG 443
Query: 267 TTKAPVLAGIIGTQFEEICMKNVSL 291
+A G+ + I +KN+++
Sbjct: 444 AGRAVYFNGLPEMPLKNIFIKNMTV 468
>gi|357054504|ref|ZP_09115588.1| hypothetical protein HMPREF9467_02560 [Clostridium clostridioforme
2_1_49FAA]
gi|355384476|gb|EHG31541.1| hypothetical protein HMPREF9467_02560 [Clostridium clostridioforme
2_1_49FAA]
Length = 522
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 90/302 (29%), Positives = 145/302 (48%), Gaps = 18/302 (5%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNR-TLKHT--RGHLVELMNSNNILISNLT 83
+I G ++ +I G G IDG WW+ + HT R ++ L + + +T
Sbjct: 183 IITGVNVKEAVIYG-QGIIDGNAGTGEGNWWHEPKVIHTACRPRMIFLERCRQVTVQGIT 241
Query: 84 FRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAV 143
RNSP W IHP + ++ + +L+P ++PNTDG+DP+S +V I GDD +AV
Sbjct: 242 VRNSPSWNIHPYFSDHLRFFDLKVLSPKDSPNTDGLDPESCKDVEIAGVCFSVGDDCIAV 301
Query: 144 KSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGV 203
KSG + G PS NI +RR S V IGSEM+GG+ ++TV G+
Sbjct: 302 KSGKIYMGSTYKCPSKNISIRRCCMRDGHGS-VTIGSEMAGGVKDLTVKDCMFLHTDRGL 360
Query: 204 RIKTDKGRG--GYIENITIRNIKMERVKIPIRIS----RGSNDHPDEGWDPKALPK---- 253
RIKT +GRG ++ I +I+M+ V P I+ + H + +ALP
Sbjct: 361 RIKTRRGRGKDAVVDKIVFEHIRMDHVMTPFVINCFYFCDPDGHSEYVRTKEALPVDDKT 420
Query: 254 --IRGISFVNVVSVNT-TKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQCQFVSGFTS 310
I+ + F ++ + N A + G+ + + M+ V + A + + Q + G S
Sbjct: 421 PFIKSLCFRDIEAENCHVAAAYMYGLPEQRIGRVEMERVRVSYAASAREGQPAMMDGCDS 480
Query: 311 QV 312
+
Sbjct: 481 HI 482
>gi|407684232|ref|YP_006799406.1| glycoside hydrolase family protein [Alteromonas macleodii str.
'English Channel 673']
gi|407245843|gb|AFT75029.1| glycoside hydrolase family 28 domain-containing protein
[Alteromonas macleodii str. 'English Channel 673']
Length = 488
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 95/316 (30%), Positives = 148/316 (46%), Gaps = 49/316 (15%)
Query: 15 RGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQM--WW--------DLWWN---RTL 61
G E +G + LI+ +N+ ITG GT+DG WW W +
Sbjct: 151 EGMELMG--YSPLIYAFEQSNIAITG-KGTLDGSAAKDNWWPWKGKWKASTWGDDPVENQ 207
Query: 62 KHTRGHLVELMNS------------------------NNILISNLTFRNSPFWTIHPVYC 97
K+TR L E++ + N+LI +T SPFW ++PV C
Sbjct: 208 KYTRDTLQEMVENGTPVSDRVFENNYLRPPFIQPYRCENVLIEGVTILRSPFWLVNPVLC 267
Query: 98 RNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARP 157
+NV + + PN+DG DP+S TNV I +C ++GDD +A+KSG + G + P
Sbjct: 268 KNVTVN--DVYCKSFGPNSDGCDPESCTNVLISNCTFDTGDDCIAIKSGRNADGRRVNVP 325
Query: 158 SSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQ--LHVWDAAAGVRIKTDKGRGGYI 215
SNI++ GV IGSE+SGG+ N+ + D G+RIKT+ RGG++
Sbjct: 326 CSNIVIEHCE-MKAGHGGVVIGSEISGGVENLYAQHCTMSSPDLDRGIRIKTNSIRGGHL 384
Query: 216 ENITIRNIKMERVKIPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAG 275
+N+ RNI + VK + + N +EG P + I+ N+ + +A VL G
Sbjct: 385 KNLNYRNIDIGTVKDAVVV----NFFYEEGDAGNFPPLLEDITIENLNVASANRAFVLRG 440
Query: 276 IIGTQFEEICMKNVSL 291
T + + N+++
Sbjct: 441 YDHTPISGLTLNNITI 456
>gi|116626800|ref|YP_828956.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116229962|gb|ABJ88671.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 462
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 141/303 (46%), Gaps = 43/303 (14%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQ--GQMWWDLWWNR-------TLKHTRGHLVELMNS--- 74
I+ + N+ ITG GT+DGQ G+ WW R + R LVE+
Sbjct: 140 FIYAFNQQNIAITG-GGTLDGQASGEHWWPWAGKRGARPDDPNQRKARAALVEMAEKGVP 198
Query: 75 ----------------------NNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLN 112
N+ I ++T NSP + +HPV CRNV+ + + + + +
Sbjct: 199 VADRKFGDGAWLRPMFIQPYRCTNVQIEDVTITNSPMYEMHPVLCRNVIARNVKVSS--H 256
Query: 113 APNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPT 172
PN DG DP+SS +V I+ C ++GDD +A+KSG + G + PS N+IV+
Sbjct: 257 GPNNDGCDPESSVDVLIDGCTFDTGDDCIAIKSGRNADGRRLHSPSENLIVQNCV-MKDG 315
Query: 173 CSGVGIGSEMSGGIFNVTVD--QLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKI 230
GV +GSE SGGI NV Q+ + +R K + RGG IE++ +RN+K +V
Sbjct: 316 HGGVTMGSECSGGIRNVFAQDCQMDSPNLNVALRFKNNAVRGGVIEHVYMRNVKAGQVA- 374
Query: 231 PIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVS 290
+ + + + +EG P +R + VN+ T L G +I ++N +
Sbjct: 375 --QAAIDVDFYYEEGEKGSFTPVVRDVEVVNLEVKKCTTPWSLRGFKSAPVRDIRIRNCT 432
Query: 291 LLG 293
G
Sbjct: 433 FAG 435
>gi|393786391|ref|ZP_10374527.1| hypothetical protein HMPREF1068_00807 [Bacteroides nordii
CL02T12C05]
gi|392660020|gb|EIY53637.1| hypothetical protein HMPREF1068_00807 [Bacteroides nordii
CL02T12C05]
Length = 509
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 136/337 (40%), Gaps = 71/337 (21%)
Query: 23 RHISLIHGDHLTNVIITGYNGTIDGQGQMWWDL-------------------------W- 56
R S I G +LTNV ITG G IDG G W L W
Sbjct: 134 RCQSPISGRNLTNVAITG-QGAIDGNGHYWRPLKREKVTESVWKQTIARGGVYKRPTYWF 192
Query: 57 -------------------------WNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWT 91
W R +V L+ N+ + F+NSP W
Sbjct: 193 PYPQTLKGDTISNMNVPQNLKTEEEWQSVRHFLRPVMVSLIECKNVWFQGVIFQNSPAWN 252
Query: 92 IHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYG 151
+HP+ C NV+I+ + + P A N DG+D +S N I + + GDD + +KSG D G
Sbjct: 253 LHPLMCENVLIEDIQVRNPSYAQNGDGLDLESCKNALIVNSTFDVGDDGICLKSGKDEDG 312
Query: 152 IAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGR 211
ARP N++V + G +GSEMSGG+ NV+V G+R K+ +GR
Sbjct: 313 RRRARPCENVVVDGCT-VFKGHGGFVVGSEMSGGVRNVSVSNCQFLGTDVGLRFKSKRGR 371
Query: 212 GGYIENITIRNIKMERV-------------KIPIRISRGSNDHPDEGWDP----KALPKI 254
GG +ENI IRN+ M + K + + P + DP P
Sbjct: 372 GGVVENIWIRNVSMMDIPTEPVTFNLYYGGKSAVEVLESGEKIPAK-VDPLPVDDTTPCF 430
Query: 255 RGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 291
R I N+V N +A GI + I + N+ +
Sbjct: 431 RNIHISNLVCSNARRALFFNGIPEMPIDGITLDNLDI 467
>gi|312130362|ref|YP_003997702.1| glycoside hydrolase [Leadbetterella byssophila DSM 17132]
gi|311906908|gb|ADQ17349.1| glycoside hydrolase family 28 [Leadbetterella byssophila DSM 17132]
Length = 775
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 121/248 (48%), Gaps = 24/248 (9%)
Query: 52 WWDLWWN-RTLK-------HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIK 103
W +LW +TL+ R +++ + N+LI +TF+NSP WT+HP+ +++ ++
Sbjct: 427 WANLWVEGKTLEDYMTVKDFLRPNMISITECENVLIEGVTFQNSPAWTLHPLLSKHITLR 486
Query: 104 GMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIV 163
+ + P N D +D +S + ++ C ++GDD + +KSG D G P+ N+I+
Sbjct: 487 NVNVRNPWFGQNNDALDLESCSYAIVDGCTFDTGDDAITLKSGRDEQGRKRGVPTENVII 546
Query: 164 RRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNI 223
+ + G IGSEMSGG+ NV VD G+R KT + RGG +ENI I NI
Sbjct: 547 KNTT-VFHGHGGFVIGSEMSGGVKNVFVDNCSFLGTDIGLRFKTKRDRGGVVENIYISNI 605
Query: 224 KMERV-------------KIPIRISRGSNDHPDEGWDP--KALPKIRGISFVNVVSVNTT 268
M + K P+ + S+ P P + P+ + NVVS
Sbjct: 606 AMNNIPGEAILFDMYYEAKDPVPLDGDSHALPVIAPQPVNEGTPQFKNFYIKNVVSHGAV 665
Query: 269 KAPVLAGI 276
A VL G+
Sbjct: 666 SAIVLRGL 673
>gi|225872229|ref|YP_002753684.1| glycosyl hydrolase, family 28 [Acidobacterium capsulatum ATCC
51196]
gi|225792218|gb|ACO32308.1| glycosyl hydrolase, family 28 [Acidobacterium capsulatum ATCC
51196]
Length = 468
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 74/217 (34%), Positives = 116/217 (53%), Gaps = 18/217 (8%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWWNRTLKH-------------TRGHLVELMNSNNILISN 81
+V ITG +GT+DG G+ WWD +W ++ R L+E S ++ ++
Sbjct: 127 DVHITG-SGTVDGNGKYWWDGYWALRKQYDLRGLRWAADYDDRRPRLIEFYQSQHVSLAG 185
Query: 82 LTFRNSPFWTIHPVYCRNVVIKGMTILAPL--NAPNTDGIDPDSSTNVCIEDCYIESGDD 139
L SPFWT+H Y V + G+TI + P+TDG+D DSS +V +E I DD
Sbjct: 186 LHLLRSPFWTVHICYSAYVHVDGITIRNNIGGRGPSTDGVDIDSSRHVLVEHADISVNDD 245
Query: 140 LVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWD- 198
+ +K+G D G+ + +P +I++R + + IGSE SGG NV V +H +
Sbjct: 246 ALCLKAGRDSDGLRVNKPDVDIVIRNCT-VRYGAAAFTIGSETSGGFRNVDVYNIHALEH 304
Query: 199 AAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRIS 235
+GV K+ RGG+ +NI I + +++ V IPI I+
Sbjct: 305 VPSGVLFKSAHTRGGWADNIRIHDFQLDGVAIPIHIT 341
>gi|257440293|ref|ZP_05616048.1| polygalacturonase [Faecalibacterium prausnitzii A2-165]
gi|257197327|gb|EEU95611.1| polygalacturonase (pectinase) [Faecalibacterium prausnitzii A2-165]
Length = 518
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 143/281 (50%), Gaps = 20/281 (7%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKHT--RGHLVELMNSNNILISNLTF 84
L++ + +V++TG GT+D Q D W N+ +K R V ++S N+ + +T
Sbjct: 183 LLNITQVHDVVVTG-EGTLDCDAQNG-DWWINQKVKRIAWRPRAVAAVDSENVCLHGITV 240
Query: 85 RNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVK 144
+NS WTIHP++ +++ + I P NAPNTDGIDP+S + I I GDD +A+K
Sbjct: 241 QNSYSWTIHPIFVKHLDLLNFNINNPYNAPNTDGIDPESCEYIRIIGANIHVGDDCIAMK 300
Query: 145 SGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVR 204
+ G+ + + + ++R G+ IGSEMSGG+ ++ V Q + G+R
Sbjct: 301 ASKVFLGMKLKKSCEHTVIRNCL-LDKGHGGIVIGSEMSGGVKDMVVTQCLMDHTDRGLR 359
Query: 205 IKTDKGRG--GYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDP-----------KAL 251
+KT +GRG I+ + RN++M VK P I+ PD G P +
Sbjct: 360 VKTRRGRGNTAVIDGLVFRNVEMRGVKTPFVINMFYFCDPD-GHSPYVQCRDAMPVDEYT 418
Query: 252 PKIRGISFVNVVSVNTTKAPV-LAGIIGTQFEEICMKNVSL 291
PK+ ++ ++V+ + A G+ E I MKNV++
Sbjct: 419 PKLGSLTMEDIVATDAQFAGCYFDGLPEQPIERISMKNVTI 459
>gi|424911961|ref|ZP_18335338.1| endopolygalacturonase [Rhizobium leguminosarum bv. viciae USDA
2370]
gi|392847992|gb|EJB00515.1| endopolygalacturonase [Rhizobium leguminosarum bv. viciae USDA
2370]
Length = 517
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 144/289 (49%), Gaps = 37/289 (12%)
Query: 35 NVIITGYNGTIDGQGQM--WWDLWWNRT---LKHTRGHLVELMNSNNILISNLTFRNSPF 89
N+II G G +DG G WW W T + RG + L++ I + T +N+
Sbjct: 195 NLIIEG-RGVLDGSGDRGDWWS-WPKETRDGARRPRG--LHLVSCRKIQLLGFTIKNAAS 250
Query: 90 WTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGW-- 147
WTIHP C +++ G+TI AP ++PNTDG +P+S NV I GDD +AVK+G
Sbjct: 251 WTIHPQGCEDLIAAGLTINAPHDSPNTDGFNPESCRNVTISGVRFSVGDDCIAVKAGKRG 310
Query: 148 -----DHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAG 202
DH + ++ R G G+ IGSEMSGG+ +V+V+ + G
Sbjct: 311 PDGEDDHLAETRGIRVRHCLMERGHG------GLVIGSEMSGGVHDVSVEDCDMVGTDRG 364
Query: 203 VRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPD-EGWDPKA-----LPKIRG 256
+R+KT +GRGG + NI +R + ++ V+ +S ++ H D +G D + P +G
Sbjct: 365 LRLKTRRGRGGIVSNIAMRRVLLDGVQTA--LSANAHYHCDADGHDERVQSRQPAPIDKG 422
Query: 257 ISFVNVVSVNTTK-------APVLAGIIGTQFEEICMKNVSLLGLAPSA 298
F++ + V + A V G+ + ++N++++ PSA
Sbjct: 423 TPFIDGIIVEDVEIRNLAHAAGVFLGLPEAPIRNVAIRNLTIVSRDPSA 471
>gi|52081815|ref|YP_080606.1| glycoside hydrolase family protein [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|319647732|ref|ZP_08001950.1| hypothetical protein HMPREF1012_02989 [Bacillus sp. BT1B_CT2]
gi|404490699|ref|YP_006714805.1| glycoside hydrolase [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|423683814|ref|ZP_17658653.1| glycoside hydrolase family protein [Bacillus licheniformis WX-02]
gi|52005026|gb|AAU24968.1| Glycoside Hydrolase Family 28 [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|52349704|gb|AAU42338.1| putative glycoside hydrolase [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|317390073|gb|EFV70882.1| hypothetical protein HMPREF1012_02989 [Bacillus sp. BT1B_CT2]
gi|383440588|gb|EID48363.1| glycoside hydrolase family protein [Bacillus licheniformis WX-02]
Length = 436
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 84/251 (33%), Positives = 126/251 (50%), Gaps = 46/251 (18%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQG--QMWWDLWWNR------TLKHTRGHLVELMNS---- 74
LI+ N+ ITG GT+DGQG + WW W R + + R L E+
Sbjct: 114 LIYAYEADNIAITG-KGTLDGQGDDEHWWP--WKRGTNGQPSQEKDRNALFEMAERGIPV 170
Query: 75 ---------------------NNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNA 113
+ILI +T NSP W +HPV C NV + G+ ++ +
Sbjct: 171 TERQFGKGHYLRPNFIQPYRCKHILIQGVTVLNSPMWQVHPVLCENVTVDGIKVIG--HG 228
Query: 114 PNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTC 173
PNTDG++P+S NV I+ C+ ++GDD +AVKSG + G + PS NI++ +
Sbjct: 229 PNTDGVNPESCKNVVIKGCHFDNGDDCIAVKSGRNADGRRINIPSENIVIEH-NEMKDGH 287
Query: 174 SGVGIGSEMSGGIFNVTVDQ--LHVWDAAAGVRIKTDKGRGGYIENI-----TIRNIKME 226
GV IGSE+SGG+ NV + + + +RIKT+ RGG +ENI T++++K E
Sbjct: 288 GGVTIGSEISGGVKNVIAEGNLMDSPNLDRALRIKTNSVRGGVLENIYFHKNTVKSLKRE 347
Query: 227 RVKIPIRISRG 237
+ I + G
Sbjct: 348 VIAIDMEYEEG 358
>gi|20451636|emb|CAC83614.1| putative polygalacturonase [Erwinia chrysanthemi]
Length = 457
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 77/214 (35%), Positives = 117/214 (54%), Gaps = 24/214 (11%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWWNRTLKHT-------RGHLVELMNSNNILISNLTFRNS 87
NV ITG GTIDGQG +WW+ W ++ T R L+ + SN +LI +T NS
Sbjct: 132 NVAITG-EGTIDGQGAVWWE-RWRAAIRATGKKGGTDRPRLIYVTRSNRVLIDGVTLTNS 189
Query: 88 PFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGW 147
P + + Y +V + G I+AP +APNTD IDP S N+ I + I+ DD +A+K+
Sbjct: 190 PSFHVVMRYAHDVTVNGTHIIAPWHAPNTDAIDPIDSQNIRITNNVIDCNDDHIAIKA-- 247
Query: 148 DHYGIAMARPSS---NIIVRRV---SGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAA 201
+P S N +V + + G+ IGSE SGG+ NV V+ +
Sbjct: 248 -------EKPDSRFPNGVVDNIYIANNVLKQGRGISIGSETSGGVNNVLVENNRFEGSMY 300
Query: 202 GVRIKTDKGRGGYIENITIRNIKMERVKIPIRIS 235
G+RIK+ +G+GG ++N+T R+ +M V++P+ S
Sbjct: 301 GIRIKSLRGKGGEVKNVTYRHTRMLDVEVPLVFS 334
>gi|354723575|ref|ZP_09037790.1| glycoside hydrolase family protein [Enterobacter mori LMG 25706]
Length = 430
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 113/220 (51%), Gaps = 25/220 (11%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWWNRTLKH--------------------TRGHLVELMNS 74
NV +TG GT+DGQG++WW +W +H R V + S
Sbjct: 99 NVSLTG-TGTLDGQGRIWWQRFWGDD-EHGGMVGDYSANGLRWVVDYDCQRPRNVLVYES 156
Query: 75 NNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYI 134
NIL+ + T S FW +H Y R+V ++ ++I+ P+TDGID DS V IE C +
Sbjct: 157 KNILLKDFTSCESGFWNVHLCYSRDVAVENLSIINSA-GPSTDGIDIDSCEQVRIERCTV 215
Query: 135 ESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQL 194
DD + +K+G AR + I++R SG+ +GSE SGGI +V ++
Sbjct: 216 SCNDDNICIKAGRGREAAPKARTARAIVIREC--VLNKGSGITLGSETSGGIEHVLIENN 273
Query: 195 HVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRI 234
G RIK+ + RGG+I +IT+RN+ ++ V+ P+ I
Sbjct: 274 RFNGTGVGFRIKSARNRGGFIRHITVRNLLLQNVRFPVLI 313
>gi|304396605|ref|ZP_07378486.1| glycoside hydrolase family 28 [Pantoea sp. aB]
gi|304356114|gb|EFM20480.1| glycoside hydrolase family 28 [Pantoea sp. aB]
Length = 430
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 118/228 (51%), Gaps = 23/228 (10%)
Query: 26 SLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWN------RTLKHTRGHL----------- 68
++++ +H NV + G +GT DGQG +WW +W +TR L
Sbjct: 90 AMLNINHCRNVTVCG-SGTFDGQGAVWWHKFWGDDENSGMLADYTRRGLRWVVDYDCRRP 148
Query: 69 --VELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTN 126
V + S + + + T ++S FW +H Y + V ++ + ++ P+TDGID DSS
Sbjct: 149 RNVVVYESECVTLEDFTSQDSGFWNLHVCYSKQVNLQRLRVMNA-TGPSTDGIDIDSSQL 207
Query: 127 VCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGI 186
V +E C + DD + VKSG + R + +II+R T SG+ +GSE SGGI
Sbjct: 208 VRVESCTVSCNDDNICVKSGRGAEAQQLGRTARDIIIRDC--TLLKGSGITLGSETSGGI 265
Query: 187 FNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRI 234
NV ++ G RIK+ + RGG+I+NI +R++KME V P +
Sbjct: 266 ENVIIEHNRFSGTGVGFRIKSARNRGGWIKNIVVRHLKMEDVCYPFML 313
>gi|357139199|ref|XP_003571172.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 266
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 54/93 (58%), Positives = 71/93 (76%)
Query: 4 WPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKH 63
W +++PLPSYGRGRE G R+ S IHG+ L +V+ITG G IDGQG +WW++W RTL+H
Sbjct: 172 WLLMEPLPSYGRGRELPGARYASFIHGNGLRDVVITGDKGVIDGQGDVWWNMWRRRTLQH 231
Query: 64 TRGHLVELMNSNNILISNLTFRNSPFWTIHPVY 96
TR +LVE ++S+ I ISN+ +NS FW IHPVY
Sbjct: 232 TRPNLVEFVHSSGIHISNVVLKNSLFWNIHPVY 264
>gi|357386032|ref|YP_004900756.1| Polygalacturonase [Pelagibacterium halotolerans B2]
gi|351594669|gb|AEQ53006.1| Polygalacturonase [Pelagibacterium halotolerans B2]
Length = 508
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 94/266 (35%), Positives = 127/266 (47%), Gaps = 18/266 (6%)
Query: 26 SLIHGDHLTNVIITGYNGTIDGQGQM--WWDLWWNRTLKHTRGHLVELMNS-NNILISNL 82
SL+ V I G G IDG G WW+ W T + R N + +S L
Sbjct: 181 SLLTAIDADGVTIAG-KGVIDGAGAEGDWWE-WPKETREGARRPRTVFANRCTQLKMSGL 238
Query: 83 TFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVA 142
T RNSP WTIHP+ C V + I P ++PNTDG++P+SST++ I GDD +A
Sbjct: 239 TVRNSPSWTIHPLDCAGAVFADLAIENPPDSPNTDGLNPESSTDIEIVGVRFSVGDDCIA 298
Query: 143 VKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAG 202
+K+G + P+ N+ VR GV IGSEMSG + +VTV + D G
Sbjct: 299 IKAGKIWPDGTVPAPTRNVSVRHCL-MERGHGGVVIGSEMSGSVTDVTVAFCTMRDTDRG 357
Query: 203 VRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDP----------KALP 252
+RIKT +GRGG + I + + M+ VK P+ I+ PD D A P
Sbjct: 358 LRIKTRRGRGGAVARIVLSDCLMDGVKTPLSINSHYFCDPDGRSDAVQNRAPAPVSAATP 417
Query: 253 KIRGISFVNVVSVNTTKAPVLAGIIG 278
KI I F N A LA ++G
Sbjct: 418 KIGDIRFERTEVKNAHHA--LAYVLG 441
>gi|307129970|ref|YP_003881986.1| Exo-poly-alpha-D-galacturonosidase [Dickeya dadantii 3937]
gi|306527499|gb|ADM97429.1| Exo-poly-alpha-D-galacturonosidase [Dickeya dadantii 3937]
Length = 467
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 77/214 (35%), Positives = 117/214 (54%), Gaps = 24/214 (11%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWWNRTLKHT-------RGHLVELMNSNNILISNLTFRNS 87
NV ITG GTIDGQG +WW+ W ++ T R L+ + SN +LI +T NS
Sbjct: 142 NVAITG-EGTIDGQGAVWWE-RWRAAIRATGKKGGTDRPRLIYVTRSNRVLIDGVTLTNS 199
Query: 88 PFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGW 147
P + + Y +V + G I+AP +APNTD IDP S N+ I + I+ DD +A+K+
Sbjct: 200 PSFHVVMRYAHDVTVNGTHIIAPWHAPNTDAIDPIDSQNIRITNNVIDCNDDHIAIKA-- 257
Query: 148 DHYGIAMARPSS---NIIVRRV---SGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAA 201
+P S N +V + + G+ IGSE SGG+ NV V+ +
Sbjct: 258 -------EKPDSRFPNGVVDNIYIANNVLKQGRGISIGSETSGGVNNVLVENNRFEGSMY 310
Query: 202 GVRIKTDKGRGGYIENITIRNIKMERVKIPIRIS 235
G+RIK+ +G+GG ++N+T R+ +M V++P+ S
Sbjct: 311 GIRIKSLRGKGGEVKNVTYRHTRMLDVEVPLVFS 344
>gi|359452816|ref|ZP_09242155.1| glycoside hydrolase, family 77 [Pseudoalteromonas sp. BSi20495]
gi|358050136|dbj|GAA78404.1| glycoside hydrolase, family 77 [Pseudoalteromonas sp. BSi20495]
Length = 489
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 128/232 (55%), Gaps = 16/232 (6%)
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+ R ++ NN+LI +T +NSPFW ++PV C +V + +T + + PN+DG DP+
Sbjct: 231 YLRPPFIQPYRCNNVLIEGITIKNSPFWLVNPVLCNSVTVCDVTFSS--HGPNSDGCDPE 288
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S +V I++C ++GDD +A+KSG + G + S NI++ GV IGSE+
Sbjct: 289 SCNHVHIKNCVFDTGDDCIAIKSGRNADGRRVNTASQNIVIENCH-MKEGHGGVVIGSEI 347
Query: 183 SGGIFNV-----TVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRG 237
SGG+ NV T+D H+ A +RIKT+ RGG IE+I IRNI++ VK I I
Sbjct: 348 SGGVNNVFVQNCTMDSPHLERA---IRIKTNSVRGGLIEHIRIRNIEVGTVKNAIVI--- 401
Query: 238 SNDHPDEGWDPKALPKIRGISFVNVVSVNT-TKAPVLAGIIGTQFEEICMKN 288
N + +EG + P +R I N+ N +KA L G ++I + N
Sbjct: 402 -NFYYEEGDAGQFDPIVRDIKIDNLHCKNVLSKALYLNGFARDPIKDITLTN 452
>gi|414071001|ref|ZP_11406978.1| glycoside hydrolase [Pseudoalteromonas sp. Bsw20308]
gi|410806622|gb|EKS12611.1| glycoside hydrolase [Pseudoalteromonas sp. Bsw20308]
Length = 489
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 128/232 (55%), Gaps = 16/232 (6%)
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+ R ++ NN+LI +T +NSPFW ++PV C +V + +T + + PN+DG DP+
Sbjct: 231 YLRPPFIQPYRCNNVLIEGITIKNSPFWLVNPVLCNSVTVCDVTFSS--HGPNSDGCDPE 288
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S +V I++C ++GDD +A+KSG + G + S NI++ GV IGSE+
Sbjct: 289 SCNHVHIKNCVFDTGDDCIAIKSGRNADGRRVNTASQNIVIENCH-MKEGHGGVVIGSEI 347
Query: 183 SGGIFNV-----TVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRG 237
SGG+ NV T+D H+ A +RIKT+ RGG IE+I IRNI++ VK I I
Sbjct: 348 SGGVNNVFVQNCTMDSPHLERA---IRIKTNSVRGGLIEHIRIRNIEVGTVKNAIVI--- 401
Query: 238 SNDHPDEGWDPKALPKIRGISFVNVVSVNT-TKAPVLAGIIGTQFEEICMKN 288
N + +EG + P +R I N+ N +KA L G ++I + N
Sbjct: 402 -NFYYEEGDAGQFDPIVRDIKIDNLHCKNVLSKALYLNGFARDPIKDITLTN 452
>gi|308185704|ref|YP_003929835.1| polygalacturonase [Pantoea vagans C9-1]
gi|308056214|gb|ADO08386.1| Putative polygalacturonase precursor [Pantoea vagans C9-1]
Length = 352
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 119/228 (52%), Gaps = 23/228 (10%)
Query: 26 SLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWN------RTLKHTRGHL----------- 68
++++ +H NV + G +GT+DGQG +WW +W +TR L
Sbjct: 90 AMLNINHCRNVTVCG-SGTLDGQGAVWWHKFWGDDETSGMLADYTRRGLRWVVDYDCRRP 148
Query: 69 --VELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTN 126
V + S + + + T ++S FW +H Y + V ++ + ++ P+TDGID DSS
Sbjct: 149 RNVVVYESECVTLEDFTSQDSGFWNLHVCYSKQVNLQRLRVMNA-TGPSTDGIDIDSSQL 207
Query: 127 VCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGI 186
V +E C + DD + VKSG + R + +II+R T SG+ +GSE SGGI
Sbjct: 208 VRVEGCTVSCNDDNICVKSGRGAEAQQLGRTARDIIIRDC--TLLKGSGITLGSETSGGI 265
Query: 187 FNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRI 234
NV ++ G RIK+ + RGG+I+NI +R++KME V P +
Sbjct: 266 ENVIIEHNRFSGTGVGFRIKSARNRGGWIKNIVVRHLKMEDVCYPFML 313
>gi|413920258|gb|AFW60190.1| hypothetical protein ZEAMMB73_155387 [Zea mays]
Length = 163
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 87/144 (60%), Gaps = 4/144 (2%)
Query: 182 MSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDH 241
MSGGI ++ V+ L + D++ G+ KT GRGGYIE++ I ++ME V + I + + H
Sbjct: 1 MSGGISDIHVNHLRIHDSSKGISFKTSPGRGGYIEDVVISEVQMENVHVGIEFTGNCSTH 60
Query: 242 PDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL---LGLAPSA 298
PD+ +DP LP I ++ N+ N + A VL+GI G F IC+ N++ G PS+
Sbjct: 61 PDDSFDPSDLPAIDHVTMKNMAGTNISVAGVLSGIEGAPFTAICLSNLNFSMAAGSGPSS 120
Query: 299 KWQCQFVSGFTSQVFPLPCPQLQN 322
W C VSG++ VFP PC +L++
Sbjct: 121 -WSCSDVSGYSEAVFPEPCTELRD 143
>gi|347531917|ref|YP_004838680.1| glycoside hydrolase family protein [Roseburia hominis A2-183]
gi|345502065|gb|AEN96748.1| glycoside hydrolase family 28 [Roseburia hominis A2-183]
Length = 518
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 142/296 (47%), Gaps = 21/296 (7%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRT---LKHTRGHLVELMNSNNILISNLT 83
+I G +++V + G G+I+G + WW + R ++ L NI + L
Sbjct: 184 IISGIDVSDVNLYG-EGSINGAAS--HENWWKNEKVMVGAFRPRMLSLNRCRNIRVQGLY 240
Query: 84 FRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAV 143
F +SP W IHP + ++ + + P +PNTDG+DP+S +V I GDD +AV
Sbjct: 241 FHDSPAWVIHPYFSDELLFCNLIVENPAKSPNTDGLDPESCRDVTICGVRFSLGDDCIAV 300
Query: 144 KSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGV 203
KSG + G PSSNI V + V +GSEM+GG+ N+ V++ + G+
Sbjct: 301 KSGKIYMGRRYKTPSSNIHVYQCL-MEHGHGAVTVGSEMAGGVNNLIVEKCRFYHTDRGL 359
Query: 204 RIKTDKGRG--GYIENITIRNIKMERVKIPIRISRGSNDHPD------EGWDP----KAL 251
RIKT +GRG ++NI R++ ME+V P + PD + +P
Sbjct: 360 RIKTRRGRGKDAILDNIIFRDLMMEQVMTPFTANAFYFCDPDGRTEFVQSREPYPVDDGT 419
Query: 252 PKIRGISFVNVVSVNT-TKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQCQFVS 306
P ++ F N+ + + A G+ + E+I M+NVS + A AK +S
Sbjct: 420 PSMKRFCFENITAKDCHVAASYFDGLPEQKIEQITMRNVS-VSFAGQAKCDVPIMS 474
>gi|320106925|ref|YP_004182515.1| glycoside hydrolase family protein [Terriglobus saanensis SP1PR4]
gi|319925446|gb|ADV82521.1| glycoside hydrolase family 28 [Terriglobus saanensis SP1PR4]
Length = 460
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 78/217 (35%), Positives = 117/217 (53%), Gaps = 18/217 (8%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWWN-RTLKHTRG------------HLVELMNSNNILISN 81
N ITG GTIDG G+++WD +W+ R TRG L+++ NS+ + +S
Sbjct: 128 NAEITG-EGTIDGDGKVFWDGYWSLRKDYDTRGIRWAADYDSKRPRLIQVFNSSQVKLSG 186
Query: 82 LTFRNSPFWTIHPVYCRNVVIKGMTILAPL--NAPNTDGIDPDSSTNVCIEDCYIESGDD 139
L R S FWT+H Y +V + G+TI P+TDGID DSS V ++ I DD
Sbjct: 187 LMLRRSGFWTVHICYSHDVTLDGLTIRNNEGGRGPSTDGIDIDSSKKVLVQHADIAVNDD 246
Query: 140 LVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDA 199
+ +K+G D G+ + RP+ +I++R S +GV IGSE SGG N+ L V
Sbjct: 247 ALCLKAGRDSDGLRVNRPTEDIVLRD-SVIRDGAAGVTIGSETSGGFRNIEAYGLTVLKQ 305
Query: 200 A-AGVRIKTDKGRGGYIENITIRNIKMERVKIPIRIS 235
G+ K+ + RGG+ EN+ +I M V + +R++
Sbjct: 306 VPVGILFKSARTRGGWGENLRFHDITMTDVPVVLRVN 342
>gi|375109255|ref|ZP_09755504.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella jeotgali KCTC 22429]
gi|374570559|gb|EHR41693.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella jeotgali KCTC 22429]
Length = 481
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 150/312 (48%), Gaps = 52/312 (16%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQM--WW---DLWWNRTLKH--------TRGHLVEL-- 71
LI+ N+ +TG NG ++G G + WW W R + TR L E+
Sbjct: 157 LIYAYQQENIALTG-NGILEGNGAVDAWWPWKGHWERRNWDYDASVDQVKTRSPLFEMAE 215
Query: 72 ---------MNSN-------------NILISNLTFRNSPFWTIHPVYCRNVVIKGMTILA 109
N N +LI +T RNSPFW I+PV +V+++ + ++
Sbjct: 216 RGVPVSERVFNENFLRPPFIQPYGCKRVLIEGVTIRNSPFWLINPVLSEDVIVRNVNCIS 275
Query: 110 PLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGT 169
PN+DG +P+S V IE+C ++GDD +A+KSG ++ G +A P N++++
Sbjct: 276 --YGPNSDGCNPESCNRVLIENCLFDTGDDCIALKSGRNNDGRRLATPVQNVVIQDCI-M 332
Query: 170 TPTCSGVGIGSEMSGGIFNVTVDQLHVW--DAAAGVRIKTDKGRGGYIENITIRNIKMER 227
GV +GSE+SGG N+ + + + A G+RIKT+ RGG IEN+ IR+I++
Sbjct: 333 RAGHGGVVMGSEISGGARNIFARRCRMSSPNLARGIRIKTNSVRGGLIENVYIRDIEIGE 392
Query: 228 VKIPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAG-----IIGTQFE 282
V+ I I N +EG +P+++ + N+ +A L G I G
Sbjct: 393 VRDAIVI----NFFYEEGDAGNFMPQVKNLHISNLTVQKAQRAFELRGFERAPISGVTLH 448
Query: 283 EICMKNVSLLGL 294
+ N + LG+
Sbjct: 449 HVQFNNTAALGV 460
>gi|399032800|ref|ZP_10732032.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398068822|gb|EJL60216.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 456
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/238 (33%), Positives = 121/238 (50%), Gaps = 15/238 (6%)
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
H R ++ NIL+ +T NSPFWTIHP ++VV++ + + A + N DG+DP+
Sbjct: 205 HFRPQFIQFNRCENILMDGVTITNSPFWTIHPFLSKDVVLRNLKVYA--HGHNNDGVDPE 262
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S NV IE+C + GDD +A+KSG + + S NI++R + V IGSE+
Sbjct: 263 MSQNVLIENCIFDQGDDAIAIKSGSNQDAWRLNTSSKNIVMRNCT-VKNGHQLVAIGSEL 321
Query: 183 SGGIFNVTVDQLHVWDAAA---GVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSN 239
SGGI NV +D V D A + IKT++ RGGY+ NI + NI ++ I G +
Sbjct: 322 SGGIENVFIDNCTVVDGAKLNHLLFIKTNERRGGYVSNIYMSNIVSGKIDAGI---LGID 378
Query: 240 DHPDEGWD------PKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 291
W + L I+ I N+ + N ++G E I +KNV++
Sbjct: 379 TDVLYQWRDLVPTIERRLTPIKNIYLDNIKATNVKFISKISGQKELPVENIFLKNVTV 436
>gi|371776320|ref|ZP_09482642.1| glycoside hydrolase family protein [Anaerophaga sp. HS1]
Length = 463
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 97/169 (57%), Gaps = 6/169 (3%)
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
H R ++ N+ + +T NSPFW IHP C NVVI+ + + A + N DG+DP+
Sbjct: 212 HLRPQFIQFNRCKNVRMEGVTIINSPFWVIHPYMCHNVVIRNVKVYA--HGHNNDGVDPE 269
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
NV IEDC + GDD +A+KSG + + PS NI+VR + IGSE+
Sbjct: 270 MCENVLIEDCVFDQGDDAIAIKSGRNQDAWRLNTPSRNIVVRNCL-VKNGHQLLAIGSEL 328
Query: 183 SGGIFNVTVDQLHVWDAAAG---VRIKTDKGRGGYIENITIRNIKMERV 228
SGG+ NV ++ V + A V IKT++ RGGY++N+ +RN+ +++
Sbjct: 329 SGGVENVFLENCTVEENARMFHLVFIKTNERRGGYVKNVYVRNVTADKM 377
>gi|325105433|ref|YP_004275087.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324974281|gb|ADY53265.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 569
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/258 (32%), Positives = 126/258 (48%), Gaps = 21/258 (8%)
Query: 65 RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSS 124
R +L + NS IL+ +TF+NSP W +HP+ ++V++ + + P A N DGID +S
Sbjct: 238 RPNLFVIANSKRILLEGVTFQNSPAWCLHPLMSEDLVLRNVFVKNPWYAQNGDGIDIESC 297
Query: 125 TNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSG 184
NV IE+ + GDD + +KSG D G A P+ ++IVR + G IGSEMSG
Sbjct: 298 KNVLIENSTFDVGDDGICIKSGRDEAGRKRAMPTEDVIVRN-NVVYHAHGGFVIGSEMSG 356
Query: 185 GIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERV-------------KIP 231
G N+ V G+R KT +GRGG +EN+ I N M+ + K P
Sbjct: 357 GAKNLYVYNNSFIGTDIGLRFKTTRGRGGIVENVYIANSYMKDIPGDAILFDMYYEAKDP 416
Query: 232 IRISRGSNDHPDEGWDP--KALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV 289
+ ++ P + P +A P+ + NVV K + GI E+ ++N+
Sbjct: 417 VPLAGEKRPAPVAEFKPVTEATPQFKNFYIKNVVCNGADKGLFVRGI-----PEMNVQNI 471
Query: 290 SLLGLAPSAKWQCQFVSG 307
L L AK + + G
Sbjct: 472 YLEDLTLEAKTGIEIIEG 489
>gi|388259231|ref|ZP_10136405.1| exo-poly-alpha-D-galacturonosidase [Cellvibrio sp. BR]
gi|387937189|gb|EIK43746.1| exo-poly-alpha-D-galacturonosidase [Cellvibrio sp. BR]
Length = 461
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 116/227 (51%), Gaps = 29/227 (12%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTL-------------------KHTRGH 67
LI+ + +T+V ITG GTIDG Q + W + GH
Sbjct: 149 LIYANKVTDVAITG-KGTIDGNAQSEFLGWAKHQAADIAKLRQMGFDGVPLEKRQFGEGH 207
Query: 68 -----LVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
L++++N+ +L+ + T NSPFW H VY + ++G+ + + N DG+D D
Sbjct: 208 FLRPSLIQILNAERVLLQDYTALNSPFWVNHLVYTDHAQVRGVKVDSMF--ANNDGLDID 265
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S + +E+ + +GDD +A+KSG D G + RPS NI+VR + GVG+GSEM
Sbjct: 266 SGRWILVENNHFRTGDDSIAIKSGRDLDGRTIGRPSENIVVR--NNLFDGEDGVGLGSEM 323
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVK 229
SGGI NV + R+K + RGG +E++ IRN+K+ K
Sbjct: 324 SGGIKNVYFTDNDYLKGTSAFRLKANLDRGGSVEHVRIRNMKIGSAK 370
>gi|313221288|emb|CBY32045.1| unnamed protein product [Oikopleura dioica]
Length = 278
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/189 (40%), Positives = 111/189 (58%), Gaps = 9/189 (4%)
Query: 2 DEWPIIDPLPSYGRGRERLGGR----HISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWW 57
D++ I+ LPSY R+ L + S+ +G+++ NV+ TG G I+G+G WW
Sbjct: 90 DDYQIMPTLPSYCIARDGLAASKDALYRSVFYGENVENVVFTG-EGLINGEGVNWWT-RN 147
Query: 58 NRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTD 117
++ LK R L + + N I LT++NSPFWTIH VY N+ I + ILA + NTD
Sbjct: 148 SQNLKFERPRLFQCLFCKNFKIEKLTWKNSPFWTIHFVYSENIEIADVAILAEHESRNTD 207
Query: 118 GIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVG 177
GID DSS+NV I D +++ GDD++A+KSG+D G P+ N++V +
Sbjct: 208 GIDIDSSSNVHIHDVFVDVGDDVIALKSGFDFCGREFGMPTKNVLVE---NSVFINENFA 264
Query: 178 IGSEMSGGI 186
IGSEMSGG+
Sbjct: 265 IGSEMSGGV 273
>gi|295103112|emb|CBL00656.1| Endopolygalacturonase [Faecalibacterium prausnitzii SL3/3]
Length = 518
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 146/289 (50%), Gaps = 21/289 (7%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKHT--RGHLVELMNSNNILISNLTF 84
L++ + +V++TG GT+D Q D W N +K R V ++S N+ + +T
Sbjct: 183 LLNITQVHDVVVTG-EGTLDCDAQNG-DWWVNPKVKRIAWRPRAVAAVDSENVCLHGITV 240
Query: 85 RNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVK 144
+NS WTIHP++ +++ + I P NAPNTDGIDP+S + I I GDD +A+K
Sbjct: 241 QNSFSWTIHPIFVKHLDLLNFNINNPYNAPNTDGIDPESCEYIRIIGMNIHVGDDCIAMK 300
Query: 145 SGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVR 204
+ G+ + R + ++R G+ IGSEMSGG+ ++ V Q + G+R
Sbjct: 301 ASKVFLGMKLKRSCEHTVIRNCL-LDKGHGGIVIGSEMSGGVKDMVVTQCLMDHTDRGLR 359
Query: 205 IKTDKGRG--GYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDP-----------KAL 251
+KT +GRG I+ + RN++M VK P I+ PD G P +
Sbjct: 360 VKTRRGRGNTAVIDGLVFRNVEMRGVKAPFVINMFYFCDPD-GHGPYVQCREAMPVDEYT 418
Query: 252 PKIRGISFVNVVSVNTTKAPV-LAGIIGTQFEEICMKNVSLLGLAPSAK 299
PK+ ++ N+V+ + A G+ E + M++VS+ P+AK
Sbjct: 419 PKLGSLTMENIVATDAQFAGCYFDGLPEQPIERVTMRDVSIT-FDPNAK 466
>gi|440760701|ref|ZP_20939804.1| Polygalacturonase [Pantoea agglomerans 299R]
gi|436425454|gb|ELP23188.1| Polygalacturonase [Pantoea agglomerans 299R]
Length = 430
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 118/229 (51%), Gaps = 23/229 (10%)
Query: 26 SLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWN------RTLKHTRGHL----------- 68
++++ +H NV + G +GT DGQG +WW +W +TR L
Sbjct: 90 AMLNINHCRNVTVCG-SGTFDGQGAVWWHKFWGDDENSGMLADYTRRGLRWVVDYDCRRP 148
Query: 69 --VELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTN 126
V + S + + + T ++S FW +H Y + V ++ + ++ P+TDGID D+S
Sbjct: 149 RNVVVYESECVTLEDFTSQDSGFWNLHVCYSKQVNLQRLRVMNA-TGPSTDGIDIDTSQL 207
Query: 127 VCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGI 186
V +E C + DD + VKSG + R + +II+R T SG+ +GSE SGGI
Sbjct: 208 VRVESCTVSCNDDNICVKSGRGAEAQQLGRTARDIIIRDC--TLLKGSGITLGSETSGGI 265
Query: 187 FNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRIS 235
NV ++ G RIK+ + RGG+I+NI +R++KME V P +
Sbjct: 266 ENVIIEHNRFSGTGVGFRIKSARNRGGWIKNIVVRHLKMEDVCYPFMLQ 314
>gi|409100257|ref|ZP_11220281.1| glycoside hydrolase family protein [Pedobacter agri PB92]
Length = 557
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 133/266 (50%), Gaps = 20/266 (7%)
Query: 42 NGTIDGQGQMWWDLWWNRTLK-HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNV 100
N + GQ DL +++K R +L+ L N IL+ +TF+NSP W +HP+ C ++
Sbjct: 204 NAGVVAAGQSAADL---QSIKDFLRPNLLVLTNCKQILLEGVTFQNSPAWNLHPLLCEDL 260
Query: 101 VIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSN 160
++ + + P A N DG+D +S NV IE + GDD + +KSG D G +P+ N
Sbjct: 261 TLRNLQVKNPWFAQNGDGVDVESCKNVLIEGSTFDVGDDGICIKSGRDEAGRKRGKPTEN 320
Query: 161 IIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITI 220
+I+R + G +GSEMSGG N+ V G+R KT +GRGG +E+I I
Sbjct: 321 VIIRN-NVVYHAHGGFVVGSEMSGGAKNIWVYDCSFIGTDIGIRFKTTRGRGGVVEDIYI 379
Query: 221 RNIKM-----ERVKI--------PIRISRGSNDHPDEGWDP--KALPKIRGISFVNVVSV 265
NI M E + PI ++ + P +A P+ + I +VV+
Sbjct: 380 NNINMIDIPGEAILFDMYYAAVDPIVLAGEKREAIKTVVVPVTEATPQFKNIYIKDVVAN 439
Query: 266 NTTKAPVLAGIIGTQFEEICMKNVSL 291
KA + G+ ++I ++NV++
Sbjct: 440 GAEKAIFVRGLPEMNIKDIYLENVTI 465
>gi|325106419|ref|YP_004276073.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324975267|gb|ADY54251.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 554
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/254 (31%), Positives = 117/254 (46%), Gaps = 53/254 (20%)
Query: 23 RHISLIHGDHLTNVIITGYNGTIDGQGQMWWDL--------WWNRTL------------- 61
R S I G +LTN+ ITG +G IDG GQ W L +W +T+
Sbjct: 132 RCQSPIWGKNLTNIAITG-SGAIDGNGQFWRPLKKQKVTESFWKKTVSGGGVFKRSDYWM 190
Query: 62 ---KHTRGHLVELMN---------------------------SNNILISNLTFRNSPFWT 91
++ G + MN N+ + + F+NSP W
Sbjct: 191 PSAQYLHGDTISDMNVPRHFKTDEEWQSVRDFLRPVMVSFRECKNVYLQGVIFQNSPAWN 250
Query: 92 IHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYG 151
IHP+ C NV+I G+ + P A N DG+D +S NV + + + GDD + +KSG + G
Sbjct: 251 IHPLMCENVIIDGIQVRNPSYAQNGDGLDLESCKNVIVVNSSFDVGDDGICLKSGKNEDG 310
Query: 152 IAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGR 211
P N+IV + G +GSEMSGG+ N++V G+R K+++GR
Sbjct: 311 RKRGMPCENVIVDNCT-VFKGHGGFVVGSEMSGGVRNISVTNCQFLGTDVGLRFKSNRGR 369
Query: 212 GGYIENITIRNIKM 225
GG +ENI I NI M
Sbjct: 370 GGVVENIFISNISM 383
>gi|268317938|ref|YP_003291657.1| glycoside hydrolase [Rhodothermus marinus DSM 4252]
gi|345304218|ref|YP_004826120.1| polygalacturonase [Rhodothermus marinus SG0.5JP17-172]
gi|262335472|gb|ACY49269.1| glycoside hydrolase family 28 [Rhodothermus marinus DSM 4252]
gi|345113451|gb|AEN74283.1| Polygalacturonase [Rhodothermus marinus SG0.5JP17-172]
Length = 470
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/235 (32%), Positives = 127/235 (54%), Gaps = 10/235 (4%)
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+ R + ++ N+LI +T NSP W IHPV C NV ++G+T+ + + PN DG +P+
Sbjct: 218 YLRPNFIQFYRCRNVLIEGVTIVNSPMWEIHPVLCENVTVRGVTVRS--HGPNNDGCNPE 275
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S V IEDC ++GDD +A+KSG + G + PS+ I++R GV IGSE+
Sbjct: 276 SCRYVLIEDCLFDTGDDCIAIKSGRNADGRRVNVPSAYIVIRNCK-MRDGHGGVVIGSEI 334
Query: 183 SGGIFNVTVDQLHVW--DAAAGVRIKTDKGRGGYIENITIRNIKMERVK-IPIRISRGSN 239
SGG ++ ++ + + +RIKT+ RGG IE+I +R +++ +V IR+ N
Sbjct: 335 SGGAHHIYAERCEMSSPNLDRALRIKTNSVRGGLIEHIYMREVEVGQVADAVIRV----N 390
Query: 240 DHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGL 294
+ +EG P +R I N+ S + A L G + ++ + + + G+
Sbjct: 391 FYYEEGDAGPFDPIVRHIEVRNLTSRQSPYALYLRGYARSPIRDVRLIDCTFDGV 445
>gi|219814394|gb|ACL36472.1| pectinase [uncultured bacterium]
Length = 436
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/251 (33%), Positives = 124/251 (49%), Gaps = 46/251 (18%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQG--QMWWDLWWNR------TLKHTRGHLVELMNS---- 74
LI+ N+ ITG GT+DGQG + WW W R + + R L E+
Sbjct: 114 LIYAYEAENIAITG-KGTLDGQGDDEHWWP--WKRGTNGQSSQEKDRNALFEMAERGVPV 170
Query: 75 ---------------------NNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNA 113
+ILI + NSP W +HPV C NV + G+ ++ +
Sbjct: 171 TERQFGKGHYLRPNFIQPYRCKDILIQGVPVLNSPMWQVHPVLCENVTVDGIKVIG--HG 228
Query: 114 PNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTC 173
PNTDG++P+S NV I+ C+ +SGDD +AVKSG + + PS NI++ +
Sbjct: 229 PNTDGVNPESCKNVVIKGCHFDSGDDCIAVKSGRNADARRINMPSENIVIEH-NEMKDGH 287
Query: 174 SGVGIGSEMSGGIFNVTVDQ--LHVWDAAAGVRIKTDKGRGGYIENI-----TIRNIKME 226
GV IGSE+SGG+ NV + + + +RIKT+ RGG +ENI T++++K E
Sbjct: 288 GGVTIGSEISGGVKNVIAEGNLMDSPNLDRALRIKTNSVRGGVLENIYFHKNTVKSLKRE 347
Query: 227 RVKIPIRISRG 237
+ I + G
Sbjct: 348 VIAIDMEYEEG 358
>gi|374311245|ref|YP_005057675.1| glycoside hydrolase family protein [Granulicella mallensis
MP5ACTX8]
gi|358753255|gb|AEU36645.1| glycoside hydrolase family 28 [Granulicella mallensis MP5ACTX8]
Length = 467
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 149/305 (48%), Gaps = 19/305 (6%)
Query: 24 HISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKHTRGHLVELMNSNNILISNLT 83
+ +L+H N+ I G G I+G + + L+ R L+E +N + + + ++
Sbjct: 136 YTALLHALDARNIAIVG-EGKIEGNEAVAGRPTKDNPLR--RPALLEFINCDGVHLEGIS 192
Query: 84 FRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAV 143
+ W+IHP C N+V + +TI + N DGID DS +V I+ C I SGDD +++
Sbjct: 193 TSYAHMWSIHPTCCDNLVFRNLTIRS--TKTNGDGIDIDSCRHVLIDSCDIASGDDCISL 250
Query: 144 KSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDA-AAG 202
KSG M RP+ ++ + + + +GIG+E S GI NV ++ H+
Sbjct: 251 KSGRGEEAYTMNRPTEDVRITNCTLEGRGFACLGIGTESSAGIRNVIIEHCHITSVYKYA 310
Query: 203 VRIKTDKGRGGYIENITIRNIKMERVKIP-IRISRGSNDHPDEGWDP--KALPKIRGISF 259
+ IK+ GRG +IEN+T+R++ R+++ +RI + + D P + LP R F
Sbjct: 311 IYIKSRIGRGAFIENLTVRDMDAARMRMGFLRIDQTNAGIQDADPVPGLEGLPLFRNFRF 370
Query: 260 VN---------VVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQCQFVSGFTS 310
N V ++NT +L G++ C K +S+ A + + V+G+T
Sbjct: 371 ENIRVQDAPVLVEAINTDSGKMLDGLVLQGISGTCAKGISIAN-ARNVAIKNVSVTGYTG 429
Query: 311 QVFPL 315
+ L
Sbjct: 430 PLLSL 434
>gi|393764308|ref|ZP_10352920.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella agri BL06]
gi|392604938|gb|EIW87837.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella agri BL06]
Length = 481
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQM--WW---DLWWNRTLKH--------TRGHLVEL-- 71
LI+ N+ +TG NG ++G G + WW W R + TR L E+
Sbjct: 157 LIYAYQQENIALTG-NGILEGNGAVDAWWPWKGQWERRNWDYDASVDQVKTRSPLFEMAE 215
Query: 72 ---------MNSN-------------NILISNLTFRNSPFWTIHPVYCRNVVIKGMTILA 109
N N +LI +T RNSPFW I+PV +V+++ + ++
Sbjct: 216 RGVPVSERVFNENFLRPPFIQPYGCKRVLIEGVTIRNSPFWLINPVLSEDVIVRNVNCIS 275
Query: 110 PLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGT 169
PN+DG +P+S V IE+C ++GDD +A+KSG ++ G +A P N++++
Sbjct: 276 --YGPNSDGCNPESCNRVLIENCLFDTGDDCIALKSGRNNDGRRLATPVQNVVIQDCI-M 332
Query: 170 TPTCSGVGIGSEMSGGIFNVTVDQLHVW--DAAAGVRIKTDKGRGGYIENITIRNIKMER 227
GV +GSE+SGG N+ + + + A G+RIKT+ RGG IEN+ IR+I++
Sbjct: 333 RAGHGGVVMGSEISGGARNIFARRCRMSSPNLARGIRIKTNSVRGGLIENVYIRDIEIGE 392
Query: 228 VKIPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAG-----IIGTQFE 282
V+ I I N +EG +P++ + N+ +A L G I G
Sbjct: 393 VRDAIVI----NFFYEEGDAGNFMPQVNNLHISNLTVQKAQRAFELRGFERAPISGVTLH 448
Query: 283 EICMKNVSLLGL 294
+ N + LG+
Sbjct: 449 HVQFNNTAALGV 460
>gi|423106873|ref|ZP_17094568.1| hypothetical protein HMPREF9687_00119 [Klebsiella oxytoca 10-5243]
gi|376388999|gb|EHT01691.1| hypothetical protein HMPREF9687_00119 [Klebsiella oxytoca 10-5243]
Length = 460
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/210 (35%), Positives = 115/210 (54%), Gaps = 16/210 (7%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWWNRTLKHT-------RGHLVELMNSNNILISNLTFRNS 87
NV I G GTIDGQG +WW+ W ++ T R L+ + ++N+LI +T +S
Sbjct: 135 NVAIVG-EGTIDGQGAVWWE-RWRENIRATGKKGGTDRPRLIYITRASNVLIDGVTLTHS 192
Query: 88 PFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGW 147
P + + Y +V I G IL+P +APNTD IDP S N+ I + YI+ DD +A+K+
Sbjct: 193 PSFHVVTRYAHDVDINGTRILSPWHAPNTDAIDPIDSQNIRITNNYIDCNDDHIAIKAEK 252
Query: 148 DHYGIAMARPSSNII--VRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRI 205
A R ++ + + T G+ IGSE +GG+ NV V+ + G+RI
Sbjct: 253 -----ADPRFPDGVVDNIYIANNTLKQGRGISIGSESAGGVNNVLVENNTFEGSMYGIRI 307
Query: 206 KTDKGRGGYIENITIRNIKMERVKIPIRIS 235
K+ +G+GG ++NI N +M V++P+ S
Sbjct: 308 KSPRGKGGEVKNIVYSNTRMHNVEVPLVFS 337
>gi|315608643|ref|ZP_07883624.1| glycoside hydrolase [Prevotella buccae ATCC 33574]
gi|315249682|gb|EFU29690.1| glycoside hydrolase [Prevotella buccae ATCC 33574]
Length = 873
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 120/228 (52%), Gaps = 8/228 (3%)
Query: 65 RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSS 124
R L+ M+ ILI ++ NSPFW IHP+ +N+ + + I PN DG DP++
Sbjct: 230 RPQLINFMHCERILIRDVKMVNSPFWVIHPLLSKNITVDNVYIWN--EGPNGDGCDPEAC 287
Query: 125 TNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSG 184
NV I++C +GDD +A+KSG ++ G +PS NII+R GV IGSE+SG
Sbjct: 288 ENVLIQNCTFHTGDDCIAIKSGRNNDGRLWGKPSKNIIIRNCK-MEDGHGGVVIGSEISG 346
Query: 185 GIFNVTVDQLHVW--DAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
G NV + ++ + +RIKT+ RGG I+NI +RN+K+ + K + + + P
Sbjct: 347 GCENVYAEDCYMDSPELERVLRIKTNNCRGGLIQNINMRNVKVGQCKEAV-LKINLDYEP 405
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVS 290
E P +R ++ NV + ++ G+ + E + NVS
Sbjct: 406 REACYRGFQPTVRNVNMENVTCGKSEYGVLVIGL--NEVENVYDINVS 451
>gi|423241479|ref|ZP_17222592.1| hypothetical protein HMPREF1065_03215 [Bacteroides dorei
CL03T12C01]
gi|392641372|gb|EIY35149.1| hypothetical protein HMPREF1065_03215 [Bacteroides dorei
CL03T12C01]
Length = 463
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/233 (35%), Positives = 118/233 (50%), Gaps = 9/233 (3%)
Query: 65 RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSS 124
R + L NIL+ T SPFW IHP+ N+ ++ + + + + N DG DP+S
Sbjct: 208 RPQFINLYKCKNILLEGFTLNRSPFWLIHPLLSENITVRKVKMQS--HGYNNDGCDPESC 265
Query: 125 TNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSG 184
NV IEDC ++GDD +A+KSG D G PS NIIVR +GV IGSE++G
Sbjct: 266 RNVLIEDCDFDTGDDCIAIKSGRDEDGRYWNIPSENIIVRHCR-MKDGHAGVAIGSEVTG 324
Query: 185 GIFNVTVDQ--LHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
G NV V+ + + +RIK++ RGG +ENI IRNI++ K I H
Sbjct: 325 GCRNVWVENCTMDSPELDRIIRIKSNAMRGGEVENIFIRNIRVGECKESILGFELKYWHV 384
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGT-QFEEICMKNVSLLGL 294
D+G LP I N+ S + L G Q ++I +K+ + G+
Sbjct: 385 DDG---PYLPYFHNIHLENITSKKSQYVLHLDGFEDKIQAQDIFVKDCTFDGV 434
>gi|403252174|ref|ZP_10918484.1| exo-poly-alpha-D-galacturonosidase [Thermotoga sp. EMP]
gi|402812187|gb|EJX26666.1| exo-poly-alpha-D-galacturonosidase [Thermotoga sp. EMP]
Length = 446
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 140/305 (45%), Gaps = 46/305 (15%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQG--QMWW------DLWWNRTLKHT-------------- 64
L++ NV ITG +G +DG + WW D W L +
Sbjct: 114 LVYALDCENVAITG-SGVLDGSADNEHWWPWKGKKDFGWKEGLPNQQEDVKKLKEMAERG 172
Query: 65 ---------RGH-----LVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAP 110
+GH V+ N+L+ + NSP W +HPV NV+I+ + I +
Sbjct: 173 TPVEERVFGKGHYLRPSFVQFYRCRNVLVEGVKIINSPMWCVHPVLSENVIIRNIEISS- 231
Query: 111 LNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVR-RVSGT 169
PN DGIDP+S + IE C ++GDD V +KSG D G + PS I+VR + +
Sbjct: 232 -TGPNNDGIDPESCKYMLIEKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVIS 290
Query: 170 TPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENI-TIRNIKMERV 228
+ G+ IGSEMSGG+ NV + +R+KT+ RGGY+ENI I N+ M
Sbjct: 291 QASHGGLVIGSEMSGGVRNVVARNNVYMNVERALRLKTNSRRGGYMENIFFIDNVAMNVS 350
Query: 229 KIPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKN 288
+ IRI+ ++ E LP +R + N+ + A + G+ ++I + +
Sbjct: 351 EEVIRINLRYDNEEGE-----YLPVVRSVFVKNLKATGGKYAVRIEGLENDYVKDILISD 405
Query: 289 VSLLG 293
+ G
Sbjct: 406 TIIEG 410
>gi|288926468|ref|ZP_06420388.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
gi|288336759|gb|EFC75125.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
Length = 843
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 120/228 (52%), Gaps = 8/228 (3%)
Query: 65 RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSS 124
R L+ M+ ILI ++ NSPFW IHP+ +N+ + + I PN DG DP++
Sbjct: 200 RPQLINFMHCERILIRDVKMVNSPFWVIHPLLSKNITVDNVYIWN--EGPNGDGCDPEAC 257
Query: 125 TNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSG 184
NV I++C +GDD +A+KSG ++ G +PS NII+R GV IGSE+SG
Sbjct: 258 ENVLIQNCTFHTGDDCIAIKSGRNNDGRLWGKPSKNIIIRNCK-MEDGHGGVVIGSEISG 316
Query: 185 GIFNVTVDQLHVW--DAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
G NV + ++ + +RIKT+ RGG I+NI +RN+K+ + K + + + P
Sbjct: 317 GCENVYAEDCYMDSPELERVLRIKTNNCRGGLIQNINMRNVKVGQCKEAV-LKINLDYEP 375
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVS 290
E P +R ++ NV + ++ G+ + E + NVS
Sbjct: 376 REACYRGFQPTVRNVNMENVTCGKSEYGVLVIGL--NEVENVYDINVS 421
>gi|402307012|ref|ZP_10826044.1| glycosyl hydrolase, family 88 [Prevotella sp. MSX73]
gi|400379233|gb|EJP32078.1| glycosyl hydrolase, family 88 [Prevotella sp. MSX73]
Length = 853
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 120/228 (52%), Gaps = 8/228 (3%)
Query: 65 RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSS 124
R L+ M+ ILI ++ NSPFW IHP+ +N+ + + I PN DG DP++
Sbjct: 210 RPQLINFMHCERILIRDVKMVNSPFWVIHPLLSKNITVDNVYIWN--EGPNGDGCDPEAC 267
Query: 125 TNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSG 184
NV I++C +GDD +A+KSG ++ G +PS NII+R GV IGSE+SG
Sbjct: 268 ENVLIQNCTFHTGDDCIAIKSGRNNDGRLWGKPSKNIIIRNCK-MEDGHGGVVIGSEISG 326
Query: 185 GIFNVTVDQLHVW--DAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
G NV + ++ + +RIKT+ RGG I+NI +RN+K+ + K + + + P
Sbjct: 327 GCENVYAEDCYMDSPELERVLRIKTNNCRGGLIQNINMRNVKVGQCKEAV-LKINLDYEP 385
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVS 290
E P +R ++ NV + ++ G+ + E + NVS
Sbjct: 386 REACYRGFQPTVRNVNMENVTCGKSEYGVLVIGL--NEVENVYDINVS 431
>gi|418299606|ref|ZP_12911438.1| polygalacturonase-like protein [Agrobacterium tumefaciens
CCNWGS0286]
gi|355534759|gb|EHH04058.1| polygalacturonase-like protein [Agrobacterium tumefaciens
CCNWGS0286]
Length = 517
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 138/289 (47%), Gaps = 35/289 (12%)
Query: 28 IHGDHLTNVIITGYNGTIDGQGQM--WWDLWWNRT---LKHTRG-HLVELMNSNNILISN 81
+H + N++I G G +DG G WW W T + RG HLV +N +
Sbjct: 188 VHAIGVDNLVIEG-RGILDGSGDKGDWW-RWPKETRDGARRPRGLHLVSCRKTN---LLG 242
Query: 82 LTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLV 141
T RN+ WTIHP C +++ G++I AP ++PNTDG +P+S NV I GDD +
Sbjct: 243 FTIRNAASWTIHPQGCEDLIAAGLSIAAPHDSPNTDGFNPESCRNVTISGVRFSVGDDCI 302
Query: 142 AVKSGW-------DHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQL 194
AVK+G DH + ++ R G G+ IGSEMSGG+ +V V+
Sbjct: 303 AVKAGKRGPDGEDDHLAETRGVRVGHCLMERGHG------GLVIGSEMSGGVHDVAVEDC 356
Query: 195 HVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISR----GSNDHPDEGWDPKA 250
+ G+R+KT +GRGG + NI +R + ++ VK + + ++ H D
Sbjct: 357 DMIGTDRGLRLKTRRGRGGAVSNIAMRRVLLDGVKTALSANAHYHCDADGHDDWVQSRNP 416
Query: 251 LPKIRGISFVNVVSVNTTK-------APVLAGIIGTQFEEICMKNVSLL 292
P G F++ ++V + A G+ + ++NV+++
Sbjct: 417 APVDSGTPFIDGITVEDVEIRNLSHAAGAFLGLAEAPIRNVTIRNVTIV 465
>gi|375150362|ref|YP_005012803.1| Exo-poly-alpha-galacturonosidase [Niastella koreensis GR20-10]
gi|361064408|gb|AEW03400.1| Exo-poly-alpha-galacturonosidase [Niastella koreensis GR20-10]
Length = 532
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 158/352 (44%), Gaps = 80/352 (22%)
Query: 3 EWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK 62
++P+I+ +Y G++ + R+ + I G L NV ITG +G IDG G +W + ++ +
Sbjct: 110 QYPLIE---TYFEGKKAV--RNQAPISGTDLENVAITG-DGVIDGNGDIWRMVKKDKVTE 163
Query: 63 --------------------------------------------HTRGHLVELMNSNNIL 78
+ R ++V L N +L
Sbjct: 164 GEWKKLTASGGVVTADGRSWYPSEAYMKAETEKGPKTDYAAIKDYLRPNMVVLRNCRKVL 223
Query: 79 ISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGD 138
+ N TF+NSP W +H +YC + + G+ + +A N DG+D +S + V +++ ++ GD
Sbjct: 224 LQNTTFQNSPCWNLHMLYCEQLTLDGVRVRNLPSAQNGDGMDIESCSYVEVKNSTLDCGD 283
Query: 139 DLVAVKSGWDHYGIAMARPSSNI-----IVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQ 193
D + +KSG D G + S I +V + G G IGSEMSGG ++ V
Sbjct: 284 DGICIKSGKDEEGRKAGKASQYIYIHDNVVYKAHG------GFVIGSEMSGGAHDIFVTN 337
Query: 194 LHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERV------------KIPIRISRGSNDH 241
G+R KT +GRGG +ENI I+NI M + P+ + G +
Sbjct: 338 CSFIGTDVGLRFKTQRGRGGVVENIYIKNISMRDIVNDAISFDMYYFGKPVSLGAGKIEI 397
Query: 242 P--DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 291
P DEG P+ R N+V ++A ++ G+ ++I + +V++
Sbjct: 398 PPVDEG-----TPQFRKFYISNIVCDGASRAMIIRGLPEMSIKDISISDVTI 444
>gi|329894082|ref|ZP_08270067.1| Glycoside hydrolase, family 77 [gamma proteobacterium IMCC3088]
gi|328923254|gb|EGG30574.1| Glycoside hydrolase, family 77 [gamma proteobacterium IMCC3088]
Length = 487
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 141/305 (46%), Gaps = 54/305 (17%)
Query: 27 LIHGDHLTNVIITGYNGTIDG--QGQMWW-----------DLWWNRTLKHTRGHL----- 68
LI+ L +V ITG GT+DG Q WW DL + K R +L
Sbjct: 151 LIYAYGLNDVAITG-QGTLDGGANDQTWWPWKGPHKEAHWDLIEGQDQKPARDYLFAMAE 209
Query: 69 --------------------VELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTIL 108
++ + IL+ + N+PFW IHPV R+V I+G+
Sbjct: 210 RGVPPRERVFADGGFLRPPFLQFYDCQRILVEGIKITNAPFWLIHPVLSRDVTIRGVHCQ 269
Query: 109 APLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSG 168
+ PN+DG DP+S V IEDC ++GDD +A+KSG + G + P +++V+
Sbjct: 270 S--YGPNSDGCDPESCERVVIEDCVFDTGDDCIALKSGRNADGRRIGVPCKDVVVQNCH- 326
Query: 169 TTPTCSGVGIGSEMSGGIFNV-----TVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNI 223
GV IGSE+SGG+ NV T+D H+ A +RIKT+ RGG IE++ I
Sbjct: 327 MKEGHGGVVIGSEISGGVANVHVRHCTMDSPHLERA---IRIKTNAQRGGLIEHLRYSKI 383
Query: 224 KMERVKIPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEE 283
+ VK I N + +EG K +P +R I ++ + L G + +
Sbjct: 384 TIGSVKDVFVI----NFYYEEGDRGKWMPLVRDIEITDLTVAKAQRVFNLRGFPQSPITD 439
Query: 284 ICMKN 288
+ ++N
Sbjct: 440 VSLRN 444
>gi|160945608|ref|ZP_02092834.1| hypothetical protein FAEPRAM212_03137 [Faecalibacterium prausnitzii
M21/2]
gi|158443339|gb|EDP20344.1| polygalacturonase (pectinase) [Faecalibacterium prausnitzii M21/2]
Length = 518
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 146/289 (50%), Gaps = 21/289 (7%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKHT--RGHLVELMNSNNILISNLTF 84
L++ + +V++TG GT+D + D W N +K R V ++S N+ + +T
Sbjct: 183 LLNITQVHDVVVTG-EGTLDCDAENG-DWWVNPKVKRIAWRPRAVAAVDSENVCLHGITV 240
Query: 85 RNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVK 144
+NS WTIHP++ +++ + I P NAPNTDGIDP+S + I I GDD +A+K
Sbjct: 241 QNSYSWTIHPIFVKHLDLLNFNINNPYNAPNTDGIDPESCEYIRIIGMNIHVGDDCIAMK 300
Query: 145 SGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVR 204
+ G+ + R + ++R G+ IGSEMSGG+ ++ V Q + G+R
Sbjct: 301 ASKVFLGMKLKRSCEHTVIRNCL-LDKGHGGIVIGSEMSGGVKDMVVTQCLMDHTDRGLR 359
Query: 205 IKTDKGRG--GYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDP-----------KAL 251
+KT +GRG I+ + RN++M VK P I+ PD G P +
Sbjct: 360 VKTRRGRGNTAVIDGLVFRNVEMRGVKAPFVINMFYFCDPD-GHGPYVQCREPLPVDEYT 418
Query: 252 PKIRGISFVNVVSVNTTKAPV-LAGIIGTQFEEICMKNVSLLGLAPSAK 299
PK+ ++ N+V+ + A G+ E + M++VS+ P+AK
Sbjct: 419 PKLGSLTMENIVATDAQFAGCYFDGLPEQPIERVTMRDVSIT-FDPNAK 466
>gi|390959335|ref|YP_006423092.1| endopolygalacturonase [Terriglobus roseus DSM 18391]
gi|390414253|gb|AFL89757.1| endopolygalacturonase [Terriglobus roseus DSM 18391]
Length = 468
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/240 (33%), Positives = 122/240 (50%), Gaps = 23/240 (9%)
Query: 34 TNVIITGYNGTIDGQGQMWWDLWWNRTLKH-------------TRGHLVELMNSNNILIS 80
T+V ITG GTIDG G WW +W+ K+ R L+++ +S+N+ +
Sbjct: 115 TDVQITG-EGTIDGDGSYWWKSYWDLRAKYEPKGLRWASDYDAKRPRLIQVFDSSNVKLD 173
Query: 81 NLTFRNSPFWTIHPVYCRNVVIKGMTILAPL--NAPNTDGIDPDSSTNVCIEDCYIESGD 138
S FWT+H Y +V I +TI P+TDGID DSS +V ++ I+ D
Sbjct: 174 GPMLTRSGFWTVHICYSHDVTIDHVTIRNNEGGKGPSTDGIDIDSSHDVLVQHADIDVND 233
Query: 139 DLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWD 198
D + +K+G D G+ + RP+ N+++R S + V GSE SGG N+ L
Sbjct: 234 DALCLKAGRDSDGLRVNRPTYNVVLRD-SLIRTGAAAVTFGSETSGGFRNIEAYNLTALR 292
Query: 199 AAA-GVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRG-----SNDHPDEGWDPKALP 252
GV IK+ K RGG+ EN+ + ++ ++ VK PI+++ S G DPK +P
Sbjct: 293 GVTNGVLIKSAKVRGGFGENLRVHDLHLDGVKTPIKVTLNWNPAYSYTSLPAGTDPKTVP 352
>gi|238917515|ref|YP_002931032.1| glycoside hydrolase family 28 [Eubacterium eligens ATCC 27750]
gi|238872875|gb|ACR72585.1| Glycoside Hydrolase Family 28 [Eubacterium eligens ATCC 27750]
Length = 518
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 149/290 (51%), Gaps = 21/290 (7%)
Query: 26 SLIHGDHLTNVIITGYNGTIDGQGQMWWDLWW-NRTLKHT--RGHLVELMNSNNILISNL 82
+++ G + +NV ITG GTIDG D WW N +++T R L + N +N+ + +
Sbjct: 182 AIVCGINCSNVTITG-EGTIDGC--TTHDNWWKNCKIRNTAWRPRLFFINNCSNVTMHGI 238
Query: 83 TFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVA 142
T +NSP WTIHP + +++ + IL P N+ NTDG+DP+S +V + YI GDD +A
Sbjct: 239 TVQNSPSWTIHPYFSKHLKFIDVKILNPANSHNTDGLDPESCQDVLVLGTYISVGDDCIA 298
Query: 143 VKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAG 202
+KSG + P+ ++ VR+ V +GSE++ G+ +V + + G
Sbjct: 299 IKSGKIYMAQKEKTPTEDMTVRQCC-MRDGHGAVTVGSEIAAGVKDVHIRDCMFMNTDRG 357
Query: 203 VRIKTDKGRG--GYIENITIRNIKMERVKIPIRISRGSNDHPDEGWD----------PKA 250
+R+KT +GRG +++I+ NI M+ V P ++ PD +
Sbjct: 358 LRVKTRRGRGKLSVLDDISFENIDMDNVMTPFVVNSFYFCDPDGKTEYVGSRKPLPVDDR 417
Query: 251 LPKIRGISFVNVVSVNTTKA-PVLAGIIGTQFEEICMKNVSLLGLAPSAK 299
P I+ ++F ++ + N A + G+ ++ E++ +N++ A AK
Sbjct: 418 TPSIKSLTFKDINAKNCHVAGAYIFGLPESKVEKLTFENIN-FSYAKDAK 466
>gi|397170830|ref|ZP_10494240.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella aestuarii B11]
gi|396087304|gb|EJI84904.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella aestuarii B11]
Length = 481
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQM--WW---DLWWNRTLKH--------TRGHLVEL-- 71
LI+ N+ +TG NG ++G G + WW W R + TR L E+
Sbjct: 157 LIYAYQQENIALTG-NGILEGNGAVDAWWPWKGDWERRNWDYDASVDQVKTRSPLFEMAE 215
Query: 72 ---------MNSN-------------NILISNLTFRNSPFWTIHPVYCRNVVIKGMTILA 109
N N +LI +T RNSPFW I+PV +V+++ + ++
Sbjct: 216 RGVPVSERVFNENFLRPPFIQPYGCKRVLIEGVTIRNSPFWLINPVLSEDVIVRNVNCIS 275
Query: 110 PLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGT 169
PN+DG +P+S V IE+C ++GDD +A+KSG ++ G +A P N++++
Sbjct: 276 --YGPNSDGCNPESCNRVLIENCLFDTGDDCIALKSGRNNDGRRLATPVQNVVIQDCI-M 332
Query: 170 TPTCSGVGIGSEMSGGIFNVTVDQLHVW--DAAAGVRIKTDKGRGGYIENITIRNIKMER 227
GV +GSE+SGG N+ + + + A G+RIKT+ RGG IEN+ IR+I++
Sbjct: 333 RAGHGGVVMGSEISGGARNIFARRCRMSSPNLARGIRIKTNSVRGGLIENVYIRDIEIGE 392
Query: 228 VKIPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAG-----IIGTQFE 282
V+ I I N +EG +P++ + N+ +A L G I G
Sbjct: 393 VRDAIVI----NFFYEEGDAGNFMPQVNNLHISNLTVQKAQRAFELRGFERAPISGVTLH 448
Query: 283 EICMKNVSLLGL 294
+ N + LG+
Sbjct: 449 HVQFNNTAALGV 460
>gi|390944044|ref|YP_006407805.1| endopolygalacturonase [Belliella baltica DSM 15883]
gi|390417472|gb|AFL85050.1| endopolygalacturonase [Belliella baltica DSM 15883]
Length = 570
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 105/359 (29%), Positives = 155/359 (43%), Gaps = 79/359 (22%)
Query: 1 MDEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMW-------- 52
D++P+I+ + G + R IS I+ D + N+ ITG GT+DG G W
Sbjct: 128 FDDYPLIE---TSFEGLNTV--RCISPIYADGVENIAITG-TGTLDGNGDAWRPVKKSKM 181
Query: 53 ----W--------------DLWWN-------------------------RTLK-HTRGHL 68
W D+W+ T+K R +
Sbjct: 182 TSSQWKSLLASGGLLNEKGDMWFPSESSIKGYQASSNFNVPDLIDPSELETVKDFLRPVM 241
Query: 69 VELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVC 128
V + NS IL+ TF+NSP W IHP+ +++I+ + + P + N DG+D +S NV
Sbjct: 242 VSIKNSKRILLDGPTFQNSPAWNIHPLMSEDIIIRNLNVRNPWYSQNGDGLDLESCKNVL 301
Query: 129 IEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFN 188
I D + GDD + KSG D G P+ N++V+ + G IGSEMSGG+ N
Sbjct: 302 IYDNIFDVGDDAICFKSGKDQDGRDRGMPTENVVVKN-NIVYHGHGGFVIGSEMSGGVRN 360
Query: 189 VTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIR-------------IS 235
V + G+R K+ +GRGG +ENI I NI M + IP +
Sbjct: 361 VHISDCTFMGTDVGLRFKSTRGRGGVVENIYISNIDM--INIPTDVINFNLFYGGNSPVL 418
Query: 236 RGSNDHPDEGWDPKALPKIRGI-SFVNVV--SVNTTKAPVLAGIIGTQFEEICMKNVSL 291
DE D A+P SF N+ ++ T + V A G E+ ++NVSL
Sbjct: 419 EADQSAEDEARDEVAVPVSETTPSFKNIFMKNIKATGSGVAANFQG--LPEMNLQNVSL 475
>gi|420263795|ref|ZP_14766431.1| glycoside family 77 [Enterococcus sp. C1]
gi|394769237|gb|EJF49100.1| glycoside family 77 [Enterococcus sp. C1]
Length = 537
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/250 (32%), Positives = 122/250 (48%), Gaps = 19/250 (7%)
Query: 62 KHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDP 121
+ RG L+ +M + NI ++ LT + P WT+H +YC VV G+TI + N DG DP
Sbjct: 260 RRVRGRLICMMQAKNIHLTELTLIDPPCWTVHMIYCDTVVTHGVTIQSK-GIDNGDGWDP 318
Query: 122 DSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSE 181
DSS N+ I D ++GDD +A+KSG + G + RP+ NI R G+ IGSE
Sbjct: 319 DSSQNLLIFDTVFDTGDDCIAIKSGKNPEGNQINRPAKNI--RLFDLAIRGGHGIAIGSE 376
Query: 182 MSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDH 241
SGG+ N+ + + G+ +K RGGYI +TI + ++R H
Sbjct: 377 QSGGVENIAFRDCQLTNTLYGLELKAQNDRGGYIRQVTITDCLLDRFMA----------H 426
Query: 242 P----DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEIC-MKNVSLLGLA- 295
P +G + LP I I N V L G + Q +++ ++ V+ +A
Sbjct: 427 PVAYNADGQAAQQLPIISDILVKNTRIVGQNPLVELKGFVDEQAQQVSPIQRVTFESVAF 486
Query: 296 PSAKWQCQFV 305
SAK Q + +
Sbjct: 487 ESAKGQKKMI 496
>gi|325568850|ref|ZP_08145143.1| hypothetical protein HMPREF9087_1432 [Enterococcus casseliflavus
ATCC 12755]
gi|325157888|gb|EGC70044.1| hypothetical protein HMPREF9087_1432 [Enterococcus casseliflavus
ATCC 12755]
Length = 537
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/250 (32%), Positives = 122/250 (48%), Gaps = 19/250 (7%)
Query: 62 KHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDP 121
+ RG L+ +M + NI ++ LT + P WT+H +YC VV G+TI + N DG DP
Sbjct: 260 RRVRGRLICMMQAKNIHLTELTLIDPPCWTVHMIYCDTVVTHGVTIQSK-GIDNGDGWDP 318
Query: 122 DSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSE 181
DSS N+ I D ++GDD +A+KSG + G + RP+ NI R G+ IGSE
Sbjct: 319 DSSQNLLIFDTVFDTGDDCIAIKSGKNPEGNQINRPAKNI--RLFDLAIRGGHGIAIGSE 376
Query: 182 MSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDH 241
SGG+ N+ + + G+ +K RGGYI +TI + ++R H
Sbjct: 377 QSGGVENIAFRDCQLTNTLYGLELKAQNDRGGYIRQVTITDCLLDRFMA----------H 426
Query: 242 P----DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEIC-MKNVSLLGLA- 295
P +G + LP I I N V L G + Q +++ ++ V+ +A
Sbjct: 427 PVAYNADGQAAQQLPIISDILVKNTRIVGQNPLVELKGFVDEQAQQVSPIQRVTFESVAF 486
Query: 296 PSAKWQCQFV 305
SAK Q + +
Sbjct: 487 ESAKGQKKMI 496
>gi|218133835|ref|ZP_03462639.1| hypothetical protein BACPEC_01724 [[Bacteroides] pectinophilus ATCC
43243]
gi|217991210|gb|EEC57216.1| polygalacturonase (pectinase) [[Bacteroides] pectinophilus ATCC
43243]
Length = 521
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 149/282 (52%), Gaps = 20/282 (7%)
Query: 26 SLIHGDHLTNVIITGYNGTIDGQGQMWWDLWW-NRTLKHT--RGHLVELMNSNNILISNL 82
+++ G ++ NV+ITG GTIDG +D WW N +++ R L + + N+ + +
Sbjct: 186 AIVCGINVENVVITG-EGTIDGNA--GFDNWWYNVKVRNIAWRPRLFFINHCRNVTMHGI 242
Query: 83 TFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVA 142
T +NSP WT+HP + ++ + I P N+ NTDG+DP+S T+V + YI GDD +A
Sbjct: 243 TVQNSPSWTLHPYFSDHLKFIDVKIKNPANSHNTDGLDPESCTDVRVLGTYISVGDDCIA 302
Query: 143 VKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAG 202
+KSG + G P+S++ VR+ V +GSE++ G+ +V + + G
Sbjct: 303 IKSGKIYMGRKHKIPTSDMEVRQCC-MRDGHGAVTVGSEIAAGVKDVHIRDCIFMNTDRG 361
Query: 203 VRIKTDKGRG--GYIENITIRNIKMERVKIPIRISRGSNDHPDEGWD----PKAL----- 251
+R+KT +GRG +++I+ NI M+ V P ++ PD + KAL
Sbjct: 362 LRVKTRRGRGRDSVLDDISFENITMDNVMTPFVVNSFYFCDPDGKTEYVATSKALPVDDR 421
Query: 252 -PKIRGISFVNVVSVNTTKA-PVLAGIIGTQFEEICMKNVSL 291
P I+ ++F ++ + N A + G+ ++ E + +NV +
Sbjct: 422 TPAIKRLTFKDIKATNCHVAGAYICGLPESKIERLTFENVDI 463
>gi|421078108|ref|ZP_15539067.1| glycoside hydrolase family 28 [Pelosinus fermentans JBW45]
gi|392523693|gb|EIW46860.1| glycoside hydrolase family 28 [Pelosinus fermentans JBW45]
Length = 453
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/236 (33%), Positives = 120/236 (50%), Gaps = 15/236 (6%)
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+ R ++ NS NILI +T ++SP W I PV C N+ I + I+ + PNTDG +PD
Sbjct: 199 YLRPSFIQFYNSKNILIEGITVKDSPMWQISPVLCENITIDKVKIVG--HGPNTDGFNPD 256
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S N+ I++CY +GDD +A+KSG + G + P NI+++ + G+ IGSE+
Sbjct: 257 SCKNILIKNCYFNNGDDCIAIKSGRNGDGRRINIPCENIVIQN-NYMKDGHGGITIGSEI 315
Query: 183 SGGIFNVTVDQLHVWDAA---AGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSN 239
SG + NV D +V D+ +R KT+ RGG IENI +N ++ + I I
Sbjct: 316 SGSVRNVFADH-NVMDSPNLDRALRFKTNSVRGGIIENIYFKNTTVKSIGEEIFIVDMDY 374
Query: 240 DHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAG-----IIGTQFEEICMKNVS 290
+ D G + P +R I N+ S +++ I QF + NV
Sbjct: 375 EEGDAG---EYTPIVRNIFVENLESYGGKTGILMSAYDRTPISNVQFTNCILHNVE 427
>gi|329962597|ref|ZP_08300545.1| polygalacturonase [Bacteroides fluxus YIT 12057]
gi|328529628|gb|EGF56526.1| polygalacturonase [Bacteroides fluxus YIT 12057]
Length = 454
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 145/299 (48%), Gaps = 33/299 (11%)
Query: 24 HISLIHGDHLTNVIITGYNGTIDGQGQMWWDLW---------------------WNRTL- 61
+ I+ TNV +TG GT+DG G + ++ W + R
Sbjct: 137 YTPFIYAYQCTNVALTG-KGTLDGNGAVTFNGWHAKQGPAVDRLRQMGIDSIPVYERVFG 195
Query: 62 --KHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGI 119
+ R +++ N+L+ ++ +SPFW IHPV+C NV ++ + I + N N DG
Sbjct: 196 EGYYLRPCMIQFYGCKNVLVEDVRIFDSPFWIIHPVFCNNVTVRNIYIDS--NNYNNDGC 253
Query: 120 DPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIG 179
DP+S TNV IE+ GDD +A+KSG D G + + + N+I+R + IG
Sbjct: 254 DPESCTNVLIENMDFNVGDDGIAIKSGRDQDGWRIGQATENVIIRNCHFAR---WAITIG 310
Query: 180 SEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSN 239
SE SGG+ NV ++ + G+ K++ RGGY EN+ +R I+ + V + ++ +N
Sbjct: 311 SETSGGVRNVYIEDCKIDSCRNGIYFKSNLDRGGYFENLNMRRIEAD-VCLWGVVNFRTN 369
Query: 240 DHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSA 298
H G + L + I +N V++ A + G+ + I ++N+ + AP A
Sbjct: 370 YHGYRGGNHPTLFRNICIEDINCNRVDSV-ALMANGLPEAKLYNITLRNIK-VKKAPKA 426
>gi|345513952|ref|ZP_08793467.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|423230893|ref|ZP_17217297.1| hypothetical protein HMPREF1063_03117 [Bacteroides dorei
CL02T00C15]
gi|423244604|ref|ZP_17225679.1| hypothetical protein HMPREF1064_01885 [Bacteroides dorei
CL02T12C06]
gi|229435766|gb|EEO45843.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|392630013|gb|EIY24015.1| hypothetical protein HMPREF1063_03117 [Bacteroides dorei
CL02T00C15]
gi|392641453|gb|EIY35229.1| hypothetical protein HMPREF1064_01885 [Bacteroides dorei
CL02T12C06]
Length = 463
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/233 (35%), Positives = 117/233 (50%), Gaps = 9/233 (3%)
Query: 65 RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSS 124
R + L NIL+ T SPFW IHP+ N+ ++ + + + + N DG DP+S
Sbjct: 208 RPQFINLYKCKNILLEGFTLNRSPFWLIHPLLSENITVRKVKMQS--HGYNNDGCDPESC 265
Query: 125 TNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSG 184
NV IEDC ++GDD +A+KSG D G PS NIIVR +GV IGSE++G
Sbjct: 266 RNVLIEDCDFDTGDDCIAIKSGRDEDGRYWNIPSENIIVRHCR-MKDGHAGVAIGSEVTG 324
Query: 185 GIFNVTVDQ--LHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
G NV V+ + + +RIK++ RGG +ENI IRNI++ K I H
Sbjct: 325 GCRNVWVENCTMDSPELDRIIRIKSNAMRGGEVENIFIRNIRVGECKESILGFELKYWHV 384
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGT-QFEEICMKNVSLLGL 294
D+G LP I N+ S + L G Q +I +K+ + G+
Sbjct: 385 DDG---PYLPYFHNIHLENITSKKSQYVLHLDGFEDKIQARDIFVKDCTFDGV 434
>gi|386819253|ref|ZP_10106469.1| endopolygalacturonase [Joostella marina DSM 19592]
gi|386424359|gb|EIJ38189.1| endopolygalacturonase [Joostella marina DSM 19592]
Length = 468
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/231 (32%), Positives = 127/231 (54%), Gaps = 9/231 (3%)
Query: 65 RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSS 124
R E NIL+ ++TF N+PFW +HP+ N+ + G+T+ + + PN DG DP+ S
Sbjct: 216 RPTFFEPFECENILVKDVTFTNAPFWVMHPIKSVNITVDGVTVRS--HGPNNDGCDPEYS 273
Query: 125 TNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSG 184
NV I++C ++GDD +A+KSG + G + PS NI+V GV +GSE+S
Sbjct: 274 KNVHIKNCLFDTGDDCIAIKSGRNDDGRRVNIPSENIVVENCE-MKDGHGGVVMGSEISA 332
Query: 185 GIFNVTVD--QLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIP-IRISRGSNDH 241
G+ NV V ++ + +RIKT+ RGG++EN+ ++NI++ +VK ++++ +
Sbjct: 333 GVRNVYVRNCKMDSPNLDRAIRIKTNTLRGGFVENVFVKNIEVGQVKEAFLKVNTHYGIY 392
Query: 242 PDEGWDPKALPKIRGISFVNVVSVNTTKAPVLA-GIIGTQFEEICMKNVSL 291
++ D +P I+ I +V N K +L G + I KNV +
Sbjct: 393 ANQEGD--YMPSIKNIHIEDVKVDNGGKYGILVRGREALPVKNITFKNVVI 441
>gi|393781893|ref|ZP_10370086.1| hypothetical protein HMPREF1071_00954 [Bacteroides salyersiae
CL02T12C01]
gi|392674779|gb|EIY68222.1| hypothetical protein HMPREF1071_00954 [Bacteroides salyersiae
CL02T12C01]
Length = 509
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 138/337 (40%), Gaps = 71/337 (21%)
Query: 23 RHISLIHGDHLTNVIITGYNGTIDGQGQMWWDL-------------------------W- 56
R S + G +LTNV ITG G IDG G W L W
Sbjct: 134 RCQSPVSGRNLTNVAITG-QGAIDGNGHFWRPLKREKVTESVWKQTIARGGVYKRPTYWF 192
Query: 57 -------------------------WNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWT 91
W R +V L+ N+ + + F+NSP W
Sbjct: 193 PYPQTLKGDTISNMNVPQNLTTEEEWQSVRHFLRPVMVSLIECKNVWLQGVIFQNSPAWN 252
Query: 92 IHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYG 151
+HP+ C NV+I+ + + P A N DG+D +S N I + + GDD + +KSG D G
Sbjct: 253 LHPLMCENVLIEEVQVRNPSYAQNGDGLDLESCKNALIVNSTFDVGDDGICLKSGKDEDG 312
Query: 152 IAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGR 211
AR N++V + G +GSEMSGG+ NV+V G+R K+ +GR
Sbjct: 313 RRRARSCENVVVDGCT-VFKGHGGFVVGSEMSGGVRNVSVSNCQFLGTDVGLRFKSKRGR 371
Query: 212 GGYIENITIRNIKMERV-------------KIPIRISRGSNDHPDEGWDP----KALPKI 254
GG +ENI +RN+ M + K + + P + DP + P
Sbjct: 372 GGIVENIWVRNVSMMDIPTEPVTFNLYYGGKSAVEVLESGEKVPLK-VDPLPVDETTPCF 430
Query: 255 RGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 291
R I N+V N +A GI + I ++N+ +
Sbjct: 431 RNIHISNLVCSNARRALFFNGIPEMPIDGITLENLDI 467
>gi|148269623|ref|YP_001244083.1| glycoside hydrolase family protein [Thermotoga petrophila RKU-1]
gi|147735167|gb|ABQ46507.1| glycoside hydrolase, family 28 [Thermotoga petrophila RKU-1]
Length = 446
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 142/310 (45%), Gaps = 46/310 (14%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQG--QMWW------DLWWNRTLKHT-------------- 64
L++ NV ITG +G +DG + WW D W L +
Sbjct: 114 LVYALDCKNVAITG-SGVLDGSADNEHWWSWKGKKDFGWKEGLPNQQEDVKKLKEMAERG 172
Query: 65 ---------RGH-----LVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAP 110
+GH V+ N+L+ ++ NSP W +HPV NV+I+ + I +
Sbjct: 173 TPVEERVFGKGHYLRPSFVQFYRCRNVLVEDVKIINSPMWCVHPVLSENVIIRNIEISS- 231
Query: 111 LNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVR-RVSGT 169
PN DGIDP+S + IE C ++GDD V +KSG D G + PS I+VR + +
Sbjct: 232 -TGPNNDGIDPESCKYMLIEKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVIS 290
Query: 170 TPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENI-TIRNIKMERV 228
+ G+ IGSEMSGG+ NV + +R+KT+ RGGY+ENI I N+ +
Sbjct: 291 QASHGGLVIGSEMSGGVRNVVARNNVYMNVERALRLKTNSRRGGYMENIFFIDNVAVNVS 350
Query: 229 KIPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKN 288
+ IRI+ ++ E LP +R + N+ + A + G+ ++I + +
Sbjct: 351 EEVIRINLRYDNEEGE-----YLPVVRSVFVKNLKATGGKYALRIEGLENDYVKDILISD 405
Query: 289 VSLLGLAPSA 298
+ G S
Sbjct: 406 TIMEGAKISV 415
>gi|224537921|ref|ZP_03678460.1| hypothetical protein BACCELL_02810 [Bacteroides cellulosilyticus
DSM 14838]
gi|224520465|gb|EEF89570.1| hypothetical protein BACCELL_02810 [Bacteroides cellulosilyticus
DSM 14838]
Length = 964
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 96/169 (56%), Gaps = 1/169 (0%)
Query: 57 WNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNT 116
W R + R L+ L + +L+ +TF+NSPFW +HP C+++++ G+ + P N+ N
Sbjct: 206 WVRLKDYVRPELMHLYHCERVLLQGVTFQNSPFWNLHPELCKHLIVDGVCVRNPWNSQNG 265
Query: 117 DGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGV 176
DG+D +S NV + + GDD V +KSG + G P+ N++V + G
Sbjct: 266 DGLDIESCQNVLVVQSTFDVGDDAVCIKSGRNEAGRLRGMPAKNVVVEDCT-VFHGHGGF 324
Query: 177 GIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKM 225
+GSEMSGG+ ++ V + G+R K+++ RGG++ +I I+N+ M
Sbjct: 325 VVGSEMSGGVHSILVRNCKFLNTDTGLRFKSNRQRGGHVSDIYIQNVYM 373
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 140/312 (44%), Gaps = 58/312 (18%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQM--WWD---------------------LWWNRTL-- 61
LI+ + TNV ITG GT+DGQ WW LW +
Sbjct: 640 LIYANGQTNVAITGA-GTLDGQASRDNWWSWKGRKSSSEQNTEAKVGKDKLLWMEQNRIS 698
Query: 62 ---------KHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLN 112
R ++ N +L+ +T SPFW +HP+ +NV+++G+ + +
Sbjct: 699 LDERIFSVNDKLRPPFIQFYRCNRVLVEGVTIIRSPFWMLHPLLSKNVIVRGVKFDS--H 756
Query: 113 APNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPT 172
PN DG DP+S NV IE C +GDD VA+KSG ++ G PS NIIVR
Sbjct: 757 GPNNDGCDPESCENVLIESCDFNNGDDCVAIKSGKNNDGRTWNLPSRNIIVRNCI-MRDG 815
Query: 173 CSGVGIGSEMSGGIFNVTVDQLHVWDAAAG---VRIKTDKGRGGYIENITIRNIKMERVK 229
+GV +GSE+SG ++V V V D+ + +RIK++ RGG ++ R+I++ K
Sbjct: 816 HAGVAVGSEISGSCYDVWVRDC-VMDSPSMDRPLRIKSNALRGGVVDGFYARDIRIGECK 874
Query: 230 IPIRISRGSNDHPDEG-WDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEE----- 283
+ + G ++P F N+ N T GI+ FE+
Sbjct: 875 QAVLRLELQYERVQSGPYNP---------VFRNIYLENVTCKKSSYGILIEGFEDRISIF 925
Query: 284 -ICMKNVSLLGL 294
+ +KN L G+
Sbjct: 926 NVRLKNCRLKGI 937
>gi|170288299|ref|YP_001738537.1| glycoside hydrolase family protein [Thermotoga sp. RQ2]
gi|170175802|gb|ACB08854.1| glycoside hydrolase family 28 [Thermotoga sp. RQ2]
Length = 446
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 141/305 (46%), Gaps = 46/305 (15%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQG--QMWW------DLWWNRTLKHT-------------- 64
L++ NV ITG +G +DG + WW D W L +
Sbjct: 114 LVYALDCKNVAITG-SGVLDGSADNEHWWPWKGKKDFGWKEGLPNQQEDVKKLKEMAERG 172
Query: 65 ---------RGH-----LVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAP 110
+GH V+ N+L+ ++ NSP W +HPV NV+I+ + I +
Sbjct: 173 TPVEERVFGKGHYLRPSFVQFYRCRNVLVEDVKIINSPMWCVHPVLSENVIIRNIEISS- 231
Query: 111 LNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVR-RVSGT 169
PN DGIDP+S + IE C ++GDD V +KSG D G + PS I+VR + +
Sbjct: 232 -TGPNNDGIDPESCKYMLIEKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVIS 290
Query: 170 TPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENI-TIRNIKMERV 228
+ G+ IGSEMSGG+ NV + +R+KT+ RGGY+ENI I N+ +
Sbjct: 291 QASHGGLVIGSEMSGGVRNVVARNNVYMNVERALRLKTNSRRGGYMENIFFIDNVAVNVS 350
Query: 229 KIPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKN 288
+ IRI+ ++ E LP +R + N+ + A + G+ ++I + +
Sbjct: 351 EEVIRINLRYDNEEGE-----YLPVVRSVFVKNLKATGGKYALRIEGLENDYVKDIMISD 405
Query: 289 VSLLG 293
+ G
Sbjct: 406 TIMEG 410
>gi|167762022|ref|ZP_02434149.1| hypothetical protein BACSTE_00368 [Bacteroides stercoris ATCC
43183]
gi|167700114|gb|EDS16693.1| polygalacturonase (pectinase) [Bacteroides stercoris ATCC 43183]
Length = 516
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 117/252 (46%), Gaps = 19/252 (7%)
Query: 57 WNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNT 116
W R +V L+ N+ + + F+NSP W +HP+ C NV+++ + + P A N
Sbjct: 229 WQSVRHFLRPVMVSLIECKNVWLQGVIFQNSPAWNLHPLMCENVLVEDVQVRNPSYAQNG 288
Query: 117 DGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGV 176
DG+D +S N I + + GDD + +KSG D G ARP N++V + G
Sbjct: 289 DGLDLESCKNALIVNSTFDVGDDGICLKSGKDEDGRRRARPCENVVVDGCT-VFKGHGGF 347
Query: 177 GIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERV-------- 228
+GSEMSGG+ NV+V G+R K+ +GRGG +ENI I N+ M +
Sbjct: 348 VVGSEMSGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGIVENIWITNVSMMDIPTEPITFN 407
Query: 229 -----KIPIRISRGSNDHPDEGWDP----KALPKIRGISFVNVVSVNTTKAPVLAGIIGT 279
K + + P + DP + P R I N+V +A GI
Sbjct: 408 LYYGGKSAVEVLESGEKVPAK-VDPLPVDETTPCFRNIHVKNLVCAGARRALFFNGIPEM 466
Query: 280 QFEEICMKNVSL 291
E + +++V +
Sbjct: 467 PIENVVLEDVDI 478
>gi|281423599|ref|ZP_06254512.1| putative exo-poly-alpha-D-galacturonosidase [Prevotella oris F0302]
gi|281402419|gb|EFB33250.1| putative exo-poly-alpha-D-galacturonosidase [Prevotella oris F0302]
Length = 856
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 118/219 (53%), Gaps = 15/219 (6%)
Query: 65 RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSS 124
R L+ + N + +S +T +SPFW IHP+ C+NV + G+ I PN DG DP++
Sbjct: 210 RPQLINFVKGNRVRVSGVTLLHSPFWVIHPLLCKNVTVDGVKIWN--EGPNGDGCDPEAC 267
Query: 125 TNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSG 184
NV I++ + +GDD +A+KSG ++ G +PS NII+R G+ IGSE+SG
Sbjct: 268 ENVLIQNTHFHTGDDCIAIKSGRNNDGRMWNKPSRNIIIRNCV-MEDGHGGIVIGSEISG 326
Query: 185 GIFNV-----TVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSN 239
G NV T+D H+ +RIKT+ RGG IENI +R +K+ + K + + +
Sbjct: 327 GCKNVYAEDCTMDSPHL---DRVLRIKTNNCRGGRIENINMRRVKVGQCKEAV-VKINLD 382
Query: 240 DHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIG 278
P+E P++R VNV V K+ I+G
Sbjct: 383 YEPEEPCYRGFEPEVRD---VNVEDVTCRKSAYGVLIVG 418
>gi|189461873|ref|ZP_03010658.1| hypothetical protein BACCOP_02539 [Bacteroides coprocola DSM 17136]
gi|189431467|gb|EDV00452.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 494
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 117/273 (42%), Gaps = 54/273 (19%)
Query: 5 PIIDPLPSYGRGRERLGGRHI-SLIHGDHLTNVIITGYNGTIDGQGQMW----------- 52
P +D P E L R S I G +L NV ITG G IDG G W
Sbjct: 116 PDVDLYPLVETVFEGLDTRRCQSPISGRNLVNVAITG-QGAIDGNGHYWRPLKKQKVTEG 174
Query: 53 -W-------------DLW--------------------------WNRTLKHTRGHLVELM 72
W D W W R +V +
Sbjct: 175 QWKAATSRGGVYKRPDYWFPYPETLKGDTISNMNVPQNLKTEEEWQSVRHFLRPVMVSFI 234
Query: 73 NSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDC 132
N+ + + F+NSP W +HP+ C NV+I+ + + P A N DG+D +S N I +
Sbjct: 235 ECKNVWLEGVVFQNSPAWNLHPLMCENVLIENVEVRNPSYAQNGDGLDLESCKNALIVNS 294
Query: 133 YIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVD 192
+ GDD + +KSG D G AR N+IV + G +GSEMSGG+ N++V+
Sbjct: 295 SFDVGDDGICLKSGKDEDGRRRARACENVIVDGCT-VYKGHGGFVVGSEMSGGVRNISVN 353
Query: 193 QLHVWDAAAGVRIKTDKGRGGYIENITIRNIKM 225
G+R K+ +GRGG +ENI IRNI M
Sbjct: 354 NCQFLGTDVGLRFKSKRGRGGVVENIWIRNISM 386
>gi|268612424|pdb|3JUR|A Chain A, The Crystal Structure Of A Hyperthermoactive
Exopolygalacturonase From Thermotoga Maritima
gi|268612425|pdb|3JUR|B Chain B, The Crystal Structure Of A Hyperthermoactive
Exopolygalacturonase From Thermotoga Maritima
gi|268612426|pdb|3JUR|C Chain C, The Crystal Structure Of A Hyperthermoactive
Exopolygalacturonase From Thermotoga Maritima
gi|268612427|pdb|3JUR|D Chain D, The Crystal Structure Of A Hyperthermoactive
Exopolygalacturonase From Thermotoga Maritima
Length = 448
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 141/310 (45%), Gaps = 46/310 (14%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQG--QMWW------DLWWNRTLKHT-------------- 64
L++ NV ITG +G +DG + WW D W L +
Sbjct: 116 LVYALDCENVAITG-SGVLDGSADNEHWWPWKGKKDFGWKEGLPNQQEDVKKLKEMAERG 174
Query: 65 ---------RGH-----LVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAP 110
+GH V+ N+L+ + NSP W IHPV NV+I+ + I +
Sbjct: 175 TPVEERVFGKGHYLRPSFVQFYRCRNVLVEGVKIINSPMWCIHPVLSENVIIRNIEISS- 233
Query: 111 LNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVR-RVSGT 169
PN DGIDP+S + IE C ++GDD V +KSG D G + PS I+VR + +
Sbjct: 234 -TGPNNDGIDPESCKYMLIEKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVIS 292
Query: 170 TPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENI-TIRNIKMERV 228
+ G+ IGSEMSGG+ NV + +R+KT+ RGGY+ENI I N+ +
Sbjct: 293 QASHGGLVIGSEMSGGVRNVVARNNVYMNVERALRLKTNSRRGGYMENIFFIDNVAVNVS 352
Query: 229 KIPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKN 288
+ IRI+ ++ E LP +R + N+ + A + G+ ++I + +
Sbjct: 353 EEVIRINLRYDNEEGE-----YLPVVRSVFVKNLKATGGKYAVRIEGLENDYVKDILISD 407
Query: 289 VSLLGLAPSA 298
+ G S
Sbjct: 408 TIIEGAKISV 417
>gi|227536102|ref|ZP_03966151.1| pectin lyase [Sphingobacterium spiritivorum ATCC 33300]
gi|227243999|gb|EEI94014.1| pectin lyase [Sphingobacterium spiritivorum ATCC 33300]
Length = 577
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 118/242 (48%), Gaps = 16/242 (6%)
Query: 65 RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSS 124
R +L+ L N IL+ +TF+NSP W +HP+ C+++ ++ + + P A N DGID +S
Sbjct: 245 RPNLLVLNNCKQILLEGVTFQNSPAWNLHPLLCQDLTVRNVMVRNPWYAQNGDGIDIESC 304
Query: 125 TNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSG 184
NV +E+ + GDD + +KSG D G A P+ N+I+R + G IGSEMSG
Sbjct: 305 KNVLVENSTFDVGDDGICIKSGRDEAGRLRAVPTENVIIRN-NVVYHAHGGFVIGSEMSG 363
Query: 185 GIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKM-------------ERVKIP 231
G N+ V G+R KT +GRGG +ENI I I M K P
Sbjct: 364 GARNIWVYDCSFIGTDIGLRFKTTRGRGGVVENIFIDRISMFDIPGEAILVDMYYEAKDP 423
Query: 232 IRISRGSNDHPDEGWDP--KALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV 289
I + + P +A P+ R +VV KA G+ + + ++N+
Sbjct: 424 IPLIGDKQEAVKAVTLPVTEATPQFRNFKIKDVVVNGADKAIFFRGLPEMNIKGMSLENI 483
Query: 290 SL 291
S+
Sbjct: 484 SI 485
>gi|295102197|emb|CBK99742.1| Endopolygalacturonase [Faecalibacterium prausnitzii L2-6]
Length = 518
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 91/289 (31%), Positives = 147/289 (50%), Gaps = 21/289 (7%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKHT--RGHLVELMNSNNILISNLTF 84
L++ + +V++TG GT+D Q D W + +K R V +++S NI + +T
Sbjct: 183 LLNITQVHDVVVTG-EGTLDCDAQNG-DWWIDPKVKRIAWRPRAVAMVDSENICLHGITV 240
Query: 85 RNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVK 144
+NS WTIHP++ +++ + I P NAPNTDGIDP+S I I GDD +A+K
Sbjct: 241 QNSYSWTIHPIFVKHLDLLSFNINNPYNAPNTDGIDPESCEYTRIIGVNIHVGDDCIAMK 300
Query: 145 SGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVR 204
+ G+ + + + ++R G+ IGSEMSGG+ ++ V Q + G+R
Sbjct: 301 ASKVFLGMKLKKSCEHTVIRNCL-LDKGHGGIVIGSEMSGGVKDMVVTQCLMDHTDRGLR 359
Query: 205 IKTDKGRG--GYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDP-----KAL------ 251
+KT +GRG I+ + RN++M VK P I+ PD G P +AL
Sbjct: 360 VKTRRGRGNTAVIDGLVFRNVEMRGVKAPFVINMFYFCDPD-GHSPYVQCREALPVDEYT 418
Query: 252 PKIRGISFVNVVSVNTTKAPV-LAGIIGTQFEEICMKNVSLLGLAPSAK 299
PK+ ++ ++V+ + A G+ E + MKNV++ P AK
Sbjct: 419 PKLGTLTMEDIVATDAQFAGCYFDGLPEQPIEGVSMKNVTIT-FDPDAK 466
>gi|281419728|ref|ZP_06250727.1| putative exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM
18205]
gi|281406257|gb|EFB36937.1| putative exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM
18205]
Length = 873
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 123/235 (52%), Gaps = 11/235 (4%)
Query: 65 RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSS 124
R LV + S ILI ++ NSPFW +HP+ C+++ + G+T+ PN DG DP++
Sbjct: 214 RPQLVNFVRSERILIKDVKMINSPFWVMHPLLCKDITVDGVTVWN--EGPNGDGCDPEAC 271
Query: 125 TNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSG 184
NV I++C +GDD +A+KSG ++ G +PS NII+R GV IGSE+SG
Sbjct: 272 ENVLIQNCIFHTGDDCIAIKSGRNNDGRLWNKPSKNIIIRNCR-MEDGHGGVVIGSEISG 330
Query: 185 GIFNVTVD--QLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
G NV + ++ +RIKT+ RGG I+NI +R + + + K + + + P
Sbjct: 331 GCENVYAENCEMDSPHLERILRIKTNNCRGGLIQNIHMRKVTVGQCKEAV-LKINLDYEP 389
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFE---EICMKNVSLLGL 294
E P +R +S +V + ++ G G + E +I +KN G+
Sbjct: 390 REACYRGFEPTVRNVSMEDVTCQKSNYGVLIIG--GNKVENVYDIHVKNCKFDGV 442
>gi|431798726|ref|YP_007225630.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430789491|gb|AGA79620.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 475
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 130/288 (45%), Gaps = 51/288 (17%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQM--WW------DLWW---------NRTLKHT----- 64
I+ N+ ITG NGT+DG M WW W +R L H
Sbjct: 149 FIYAYQQENIAITG-NGTLDGHADMEHWWPWCGAKHFGWKEGMGRQNPSRKLLHEMVHDR 207
Query: 65 --------------RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAP 110
R V+ N+LI ++ N+P W +HPV C NV ++ + I
Sbjct: 208 VPLEERIFGEGHFMRPQFVQPFECKNVLIQDVKLINAPMWNLHPVLCENVTVERVKIETL 267
Query: 111 LNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTT 170
PN DG DP++ NV I+DCY ++GDD +A+KSG + G PS NII+
Sbjct: 268 --GPNNDGCDPEACKNVLIKDCYFDTGDDCIAIKSGRNEDGRIPGIPSENIIIEGCE-MK 324
Query: 171 PTCSGVGIGSEMSGGIFNVTVDQLHVWDAA---AGVRIKTDKGRGGYIENITIRNIKMER 227
GV IGSE+SGG NV L V D+ +RIKT RGG +ENI +R++ +
Sbjct: 325 EGHGGVVIGSEISGGARNVFAQNL-VMDSPNLDRVLRIKTSSKRGGTVENIYMRDVVVGT 383
Query: 228 VK-IPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLA 274
+ +R + + D +P IR + N+ N K V+A
Sbjct: 384 YREAAVRFNMFYEEEGDH------IPTIRNVIVENLQVKNGGKYAVMA 425
>gi|299141314|ref|ZP_07034451.1| exo-poly-alpha-D-galacturonosidase [Prevotella oris C735]
gi|298577274|gb|EFI49143.1| exo-poly-alpha-D-galacturonosidase [Prevotella oris C735]
Length = 858
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 117/216 (54%), Gaps = 12/216 (5%)
Query: 65 RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSS 124
R L+ + N + +S +T +SPFW IHP+ C+NV + G+ I PN DG DP++
Sbjct: 212 RPQLINFVKGNRVRVSGVTLLHSPFWVIHPLLCKNVTVDGVKIWN--EGPNGDGCDPEAC 269
Query: 125 TNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSG 184
NV I++ + +GDD +A+KSG ++ G +PS NII+R G+ IGSE+SG
Sbjct: 270 ENVLIQNTHFHTGDDCIAIKSGRNNDGRMWNKPSRNIIIRNCV-MEDGHGGIVIGSEISG 328
Query: 185 GIFNV-----TVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSN 239
G NV T+D H+ +RIKT+ RGG IENI +R +K+ + K + + +
Sbjct: 329 GCKNVYAEDCTMDSPHL---DRVLRIKTNNCRGGRIENINMRRVKVGQCKEAV-VKINLD 384
Query: 240 DHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAG 275
P+E P++R ++ +V + ++ G
Sbjct: 385 YEPEEPCYRGFEPEVRDVNIEDVTCRKSAYGVLIVG 420
>gi|182416077|ref|YP_001821143.1| glycosyl hydrolase [Opitutus terrae PB90-1]
gi|177843291|gb|ACB77543.1| glycosyl hydrolase family 88 [Opitutus terrae PB90-1]
Length = 865
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 140/301 (46%), Gaps = 45/301 (14%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLWW-----------------NRTLK------- 62
I+ N+ ITG GT+DG W WW NR ++
Sbjct: 535 FIYAWEQENIAITG-EGTLDGGSD--WSTWWGWNDKRDGTAPKQRAARNRLIQMGETNVP 591
Query: 63 ----------HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLN 112
R + V+ NILI ++ SP W +HPV +N+ ++ + I + +
Sbjct: 592 VAERVFGANDFLRPNFVQPYRCKNILIEGVSIIRSPMWELHPVLSQNITVRNVKITS--H 649
Query: 113 APNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPT 172
PN DG DP+S ++ +ED ++GDD +A+KSG + G + P+ N+++RR
Sbjct: 650 GPNNDGFDPESCRDILVEDTLFDTGDDCIAIKSGRNGDGRRVNVPTENMVIRRCV-MKDG 708
Query: 173 CSGVGIGSEMSGGIFNVTVD--QLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKI 230
GV +GSE +GGI N+ V+ ++ D G+R K + RGG +EN+ +RN+K+ RV
Sbjct: 709 HGGVVLGSECTGGIRNIFVEDCEMDSPDLDRGLRFKNNAVRGGVLENVFMRNVKIGRVGE 768
Query: 231 PIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVS 290
+ + +EG P +R + N+ S + + + G G E+I + N +
Sbjct: 769 AVLT---IDLLYEEGAKGAFKPIVRNVQMENITSSASPRVMYIRGFPGAVIEDIRISNST 825
Query: 291 L 291
Sbjct: 826 F 826
>gi|408369543|ref|ZP_11167324.1| glycoside hydrolase [Galbibacter sp. ck-I2-15]
gi|407745289|gb|EKF56855.1| glycoside hydrolase [Galbibacter sp. ck-I2-15]
Length = 466
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 80/234 (34%), Positives = 127/234 (54%), Gaps = 16/234 (6%)
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
H R E S N+LI +TF N+PFW +HP+ C NV + G+ +++ + PN DG +P+
Sbjct: 212 HLRPTFFEPFESENVLIKGVTFINAPFWVMHPIKCTNVTVDGVKVIS--HGPNNDGCNPE 269
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S NV I +C ++GDD +A+KSG + G + S NI+V GV +GSE+
Sbjct: 270 YSKNVHITNCVFDTGDDCIAIKSGRNDEGRRVGIVSENIVVENCI-MKDGHGGVVMGSEI 328
Query: 183 SGGIFNVTVD--QLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVK---IPIRISRG 237
S G+ NV V ++ + +RIKT+ RGG++EN+ +++I++ +VK + I
Sbjct: 329 SAGVRNVYVRNCKMDSPNLDRAIRIKTNTLRGGFVENVFVKDIQVGQVKEAFLKINTYYA 388
Query: 238 SNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 291
D+ EG + +P I+ I NV + K GI+ EE +KNV+
Sbjct: 389 IYDN-QEG---EHIPTIKNIHIENVTVEDGGK----YGILIQGREENPVKNVTF 434
>gi|300726353|ref|ZP_07059805.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
gi|299776378|gb|EFI72936.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
Length = 464
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 87/275 (31%), Positives = 130/275 (47%), Gaps = 34/275 (12%)
Query: 24 HISLIHGDHLTNVIITGYNGTIDGQGQMWWDLW---------WNRTLKHT---------- 64
H I+G + NV ITG GTIDG + W +R H
Sbjct: 140 HSPFIYGYQVENVAITG-KGTIDGNAMTTFATWRPKQKPAQLLSRQQNHEEVPIVQRKFG 198
Query: 65 -----RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGI 119
R L++L S NI + + NSPFW IH + N++ + + A L N DGI
Sbjct: 199 QGQWLRPQLIQLYQSKNITLEGVKIINSPFWCIHLLKSENIICRRLRYDAKL--VNNDGI 256
Query: 120 DPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIG 179
DP+ S N+ IED + +GDD VA+KSG D+ G A P+ NI++R V IG
Sbjct: 257 DPEMSRNILIEDIHFNNGDDNVAIKSGRDNDGWHDACPAENIVIRNCH--FKGLHAVVIG 314
Query: 180 SEMSGGIFNVTVDQL-HVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGS 238
SEMS G+ NV V+ + GV IKT+ RGG++ ++ + N K + V+ + +
Sbjct: 315 SEMSAGVRNVFVENCDYAGYCKRGVFIKTNPDRGGFVSHLFVNNCKFDEVEDLFYV---T 371
Query: 239 NDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVL 273
+ + EG + I + +V+ +S +A L
Sbjct: 372 SRYAGEGQESMHFSTIEHL-YVDGLSARKVRAAAL 405
>gi|379723469|ref|YP_005315600.1| glycoside hydrolase family protein [Paenibacillus mucilaginosus
3016]
gi|386726203|ref|YP_006192529.1| glycoside hydrolase [Paenibacillus mucilaginosus K02]
gi|378572141|gb|AFC32451.1| glycoside hydrolase family 28 [Paenibacillus mucilaginosus 3016]
gi|384093328|gb|AFH64764.1| glycoside hydrolase family protein [Paenibacillus mucilaginosus
K02]
Length = 530
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 92/172 (53%), Gaps = 1/172 (0%)
Query: 57 WNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNT 116
+ + R +L+ L +L+ TF+NSP W +HP C +V ++G+T+ P N
Sbjct: 198 YEAARDYLRPNLLSLRRCKYVLLEGATFQNSPAWNLHPWACEHVTLRGVTVRNPWYGQNG 257
Query: 117 DGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGV 176
DG+D DS +EDC + GDD + +KSG D G A+ P +I++R G
Sbjct: 258 DGLDLDSCRYGLVEDCSFDVGDDAICIKSGKDEAGRALGIPCEDILIRNCR-VYHGHGGF 316
Query: 177 GIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERV 228
IGSEMSGG+ + V+ G+R K+ +GRGG +E+I I I+M +
Sbjct: 317 VIGSEMSGGVRRLRVEDCTFMGTDIGLRFKSTRGRGGLVEDIEIERIRMNSI 368
>gi|198277233|ref|ZP_03209764.1| hypothetical protein BACPLE_03445 [Bacteroides plebeius DSM 17135]
gi|198269731|gb|EDY94001.1| polygalacturonase (pectinase) [Bacteroides plebeius DSM 17135]
Length = 478
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 94/175 (53%), Gaps = 3/175 (1%)
Query: 57 WNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNT 116
WN R L+ L N+L+ +TF+NSP W +HP+ C ++ I G+ + P + N
Sbjct: 183 WNEIRPWLRPVLLSLAKCKNVLLKGVTFKNSPSWCLHPLSCEHITIDGVKVFNPWYSQNG 242
Query: 117 DGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGV 176
D +D +S TN + + ++GDD + +KSG D G P N+IV+ + G
Sbjct: 243 DALDLESCTNALVINNVFDAGDDAICIKSGKDEDGRKRGEPCQNVIVKN-NVVLHGHGGF 301
Query: 177 GIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIP 231
+GSEMSGG+ N+ V G+R K+ +GRGG +ENI I NI M + IP
Sbjct: 302 VVGSEMSGGVKNIYVSDCTFLGTDVGLRFKSTRGRGGVVENIHIHNINM--IDIP 354
>gi|300772072|ref|ZP_07081942.1| exo-poly-alpha-D-galacturonosidase [Sphingobacterium spiritivorum
ATCC 33861]
gi|300760375|gb|EFK57201.1| exo-poly-alpha-D-galacturonosidase [Sphingobacterium spiritivorum
ATCC 33861]
Length = 570
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 118/242 (48%), Gaps = 16/242 (6%)
Query: 65 RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSS 124
R +L+ L N IL+ +TF+NSP W +HP+ C+++ ++ + + P A N DGID +S
Sbjct: 238 RPNLLVLNNCKQILLEGVTFQNSPAWNLHPLLCQDLTVRNVMVRNPWYAQNGDGIDIESC 297
Query: 125 TNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSG 184
NV +E+ + GDD + +KSG D G A P+ N+I+R + G IGSEMSG
Sbjct: 298 KNVLVENSTFDVGDDGICIKSGRDEAGRLRAVPTENVIIRN-NVVYHAHGGFVIGSEMSG 356
Query: 185 GIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKM-------------ERVKIP 231
G N+ V G+R KT +GRGG +ENI I I M K P
Sbjct: 357 GARNIWVYDCSFIGTDIGLRFKTTRGRGGIVENIFIDRISMFDIPGEAILADMYYEAKDP 416
Query: 232 IRISRGSNDHPDEGWDP--KALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV 289
I + + P +A P+ R +VV KA G+ + + ++N+
Sbjct: 417 IPLIGDKQEAVKAVTLPVTEATPQFRNFKIKDVVVNGADKAIFFRGLPEMNIKGMSLENI 476
Query: 290 SL 291
S+
Sbjct: 477 SI 478
>gi|375100956|ref|ZP_09747219.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
gi|374661688|gb|EHR61566.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
Length = 557
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 144/296 (48%), Gaps = 45/296 (15%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQG--QMWWDLWWNRTL----------------------- 61
I+ + NV ITG +G +DGQ + WW+ W T
Sbjct: 163 FIYARGVENVAITG-SGVLDGQADEKHWWN-WSGSTQAEDRETLFRMGEQGVPVEQRRFG 220
Query: 62 --KHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGI 119
H R + V+ +S NIL+ +T +NSP W IHPV N+ + G+ + +P PN DG+
Sbjct: 221 AGHHLRPNFVQFYDSRNILVQGVTLKNSPMWMIHPVLSHNITVDGVVLDSP-EGPNNDGV 279
Query: 120 DPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIG 179
+P+SS +V I++ ++GDD +A+KSG + G + PS NI++ + GV +G
Sbjct: 280 NPESSRDVVIKNSRFDNGDDCIAIKSGRNADGRRIGVPSENILIEN-NHMQDGHGGVVMG 338
Query: 180 SEMSGGIFNVTVDQLHVWDAA---AGVRIKTDKGRGGYIENITIR-NIKMERVKIPIRIS 235
SEMSG + NV Q +V D+ +RIKT+ RGG +EN+ R N +E IR+
Sbjct: 339 SEMSGSVRNVFA-QHNVMDSPNLHRALRIKTNSVRGGIVENVYFRHNTVVEIGDEVIRV- 396
Query: 236 RGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 291
N +E P +R I ++ S N A L G +E + NV++
Sbjct: 397 ---NFFYEEADSGPHTPIVRNIHIEDLRSDNGEYALYLRG-----YERSPVSNVTV 444
>gi|15643203|ref|NP_228247.1| exo-poly-alpha-D-galacturonosidase [Thermotoga maritima MSB8]
gi|4980944|gb|AAD35522.1|AE001722_6 exo-poly-alpha-D-galacturonosidase, putative [Thermotoga maritima
MSB8]
Length = 448
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 141/310 (45%), Gaps = 46/310 (14%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQG--QMWW------DLWWNRTLKHT-------------- 64
L++ NV ITG +G +DG + WW D W L +
Sbjct: 116 LVYALDCENVAITG-SGVLDGSADNEHWWPWKGKKDFGWKEGLPNQQEDVKKLKEMAERG 174
Query: 65 ---------RGH-----LVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAP 110
+GH V+ N+L+ + NSP W +HPV NV+I+ + I +
Sbjct: 175 TPVEERVFGKGHYLRPSFVQFYRCRNVLVEGVKIINSPMWCVHPVLSENVIIRNIEISS- 233
Query: 111 LNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVR-RVSGT 169
PN DGIDP+S + IE C ++GDD V +KSG D G + PS I+VR + +
Sbjct: 234 -TGPNNDGIDPESCKYMLIEKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVIS 292
Query: 170 TPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENI-TIRNIKMERV 228
+ G+ IGSEMSGG+ NV + +R+KT+ RGGY+ENI I N+ +
Sbjct: 293 QASHGGLVIGSEMSGGVRNVVARNNVYMNVERALRLKTNSRRGGYMENIFFIDNVAVNVS 352
Query: 229 KIPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKN 288
+ IRI+ ++ E LP +R + N+ + A + G+ ++I + +
Sbjct: 353 EEVIRINLRYDNEEGE-----YLPVVRSVFVKNLKATGGKYAVRIEGLENDYVKDILISD 407
Query: 289 VSLLGLAPSA 298
+ G S
Sbjct: 408 TIIEGAKISV 417
>gi|326800288|ref|YP_004318107.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326551052|gb|ADZ79437.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 543
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 124/259 (47%), Gaps = 21/259 (8%)
Query: 56 WWNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPN 115
++ + R +++ L IL+ +TF+NS W IHP+ ++ I+ + + P + N
Sbjct: 206 FYEEIKDYLRPNMILLEKCERILLEGVTFQNSAAWNIHPLMSADLTIRNINVRNPWYSQN 265
Query: 116 TDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSG 175
DG+D +S NV +E + GDD + +KSG + G P+ N+ VR + G
Sbjct: 266 GDGLDIESCKNVLVEQSTFDVGDDAICIKSGRNEAGRERGMPTENLWVRNCT-VYHAHGG 324
Query: 176 VGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERV------- 228
+GSEMSGG N+ VD G+R KT +GRGG +EN+ I NI M+ +
Sbjct: 325 FVVGSEMSGGAKNLYVDNCTFIGTDIGLRFKTTRGRGGVVENVYINNIFMKDIPGEAILF 384
Query: 229 ------KIPIRISRGSNDHPDEGWDP--KALPKIRGISFVNVVSVNTTKAPVLAGIIGTQ 280
K PI +S + P + P +A P+ + NVV KA + G+
Sbjct: 385 DMYYEAKDPIVLSGEHREPPKVEFLPVTEATPQFKDFYINNVVCDGAAKALFIRGL---- 440
Query: 281 FEEICMKNVSLLGLAPSAK 299
E+ +KN+ L L AK
Sbjct: 441 -PEMHIKNIQLTRLDMVAK 458
>gi|418045389|ref|ZP_12683485.1| glycoside hydrolase family 28 [Thermotoga maritima MSB8]
gi|351678471|gb|EHA61618.1| glycoside hydrolase family 28 [Thermotoga maritima MSB8]
Length = 446
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 140/305 (45%), Gaps = 46/305 (15%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQG--QMWW------DLWWNRTLKHT-------------- 64
L++ NV ITG +G +DG + WW D W L +
Sbjct: 114 LVYALDCENVAITG-SGVLDGSADNEHWWPWKGKKDFGWKEGLPNQQEDVKKLKEMAERG 172
Query: 65 ---------RGH-----LVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAP 110
+GH V+ N+L+ + NSP W +HPV NV+I+ + I +
Sbjct: 173 TPVEERVFGKGHYLRPSFVQFYRCRNVLVEGVKIINSPMWCVHPVLSENVIIRNIEISS- 231
Query: 111 LNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVR-RVSGT 169
PN DGIDP+S + IE C ++GDD V +KSG D G + PS I+VR + +
Sbjct: 232 -TGPNNDGIDPESCKYMLIEKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVIS 290
Query: 170 TPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENI-TIRNIKMERV 228
+ G+ IGSEMSGG+ NV + +R+KT+ RGGY+ENI I N+ +
Sbjct: 291 QASHGGLVIGSEMSGGVRNVVARNNVYMNVERALRLKTNSRRGGYMENIFFIDNVAVNVS 350
Query: 229 KIPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKN 288
+ IRI+ ++ E LP +R + N+ + A + G+ ++I + +
Sbjct: 351 EEVIRINLRYDNEEGE-----YLPVVRSVFVKNLKATGGKYAVRIEGLENDYVKDILISD 405
Query: 289 VSLLG 293
+ G
Sbjct: 406 TIIEG 410
>gi|189464040|ref|ZP_03012825.1| hypothetical protein BACINT_00375 [Bacteroides intestinalis DSM
17393]
gi|189438613|gb|EDV07598.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 532
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 78/228 (34%), Positives = 119/228 (52%), Gaps = 36/228 (15%)
Query: 43 GTIDGQGQMWWDLWW---------------NRTLKHTRGHLVELMNSNNILISNLTFRNS 87
GT+D +G+++WD +W + K RG LVE NS+++ +SN T +
Sbjct: 188 GTLDCRGKIFWDKYWAMRKEYEAKGLRWIVDYDCKRVRGILVE--NSSDVTLSNFTLMRT 245
Query: 88 PFWTIHPVYCRNVVIKGMTILAPL--NAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKS 145
FW +Y + + G+ I + P+TDGID DSSTN+ IE+C I+ DD + +K+
Sbjct: 246 GFWGCQILYSDHCTVDGLIINNNIGGRGPSTDGIDIDSSTNILIENCEIDCNDDNICLKA 305
Query: 146 GWDHYGIAMARPSSNIIVRRVS----GTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAA 201
G D G+ + RP+ NI++R + G TC GSE SGGI NV L + +
Sbjct: 306 GRDADGLRVNRPTENIVIRNCTVHKGGGLITC-----GSETSGGIRNVLAHDLKAFGTSN 360
Query: 202 GVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDPK 249
+++K+ RGG IENI I ++ + V+ RI D W+PK
Sbjct: 361 VLQLKSAMTRGGVIENIYITRVEAKNVR---RIF-----GADPNWNPK 400
>gi|423301906|ref|ZP_17279929.1| hypothetical protein HMPREF1057_03070 [Bacteroides finegoldii
CL09T03C10]
gi|408470997|gb|EKJ89529.1| hypothetical protein HMPREF1057_03070 [Bacteroides finegoldii
CL09T03C10]
Length = 489
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 125/243 (51%), Gaps = 39/243 (16%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWW---------------NRTLKHTRGHLVELMNSNNILI 79
N +TG G ID +G+++WD +W + K RG LV NS +I +
Sbjct: 152 NAALTG-EGFIDCRGKVFWDKYWEMRKEYEKKKLRWIVDYDCKRVRGILVS--NSKHITL 208
Query: 80 SNLTFRNSPFWTIHPVYCRNVVIKGMTILAPL--NAPNTDGIDPDSSTNVCIEDCYIESG 137
+ T + FW +Y + + G+TI + + P+TDGID DSSTN+ +E+C ++
Sbjct: 209 KDFTLVRTGFWACQILYSDHCSVDGVTINNNVGGHGPSTDGIDIDSSTNILVENCEVDCN 268
Query: 138 DDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGI---GSEMSGGIFNVTVDQL 194
DD + +K+G D G+ + RP+ N+++R + G G+ GSE SG I NV L
Sbjct: 269 DDNICIKAGRDADGLRVNRPTENVVIRNCTAR----KGAGLVTCGSETSGSIRNVLAYDL 324
Query: 195 HVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDPK----A 250
+ A +R+K+ RGG +ENI + +K + VK + + G N W+PK A
Sbjct: 325 KAYGTGAALRLKSSMNRGGTVENIYMTRVKADSVKYVLAV--GLN------WNPKYSYSA 376
Query: 251 LPK 253
LP+
Sbjct: 377 LPE 379
>gi|197105923|ref|YP_002131300.1| exo-poly-alpha-D-galacturonosidase [Phenylobacterium zucineum HLK1]
gi|196479343|gb|ACG78871.1| exo-poly-alpha-D-galacturonosidase [Phenylobacterium zucineum HLK1]
Length = 468
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 112/224 (50%), Gaps = 29/224 (12%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLWWN------RTLK------------------ 62
I+ + +V ITG G IDG Q + W N + L+
Sbjct: 149 FIYAAGVEDVAITG-GGVIDGNAQSRFHAWHNLAEPDFQRLRRMGFEGVPVAQRRFGKGT 207
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
H R L+++ + + T RNSPFW H VY VV++G+T+ + + PN DG+D +
Sbjct: 208 HLRPPLIQVFGGKRVRLEGFTARNSPFWVNHLVYADEVVVRGITVDS--HFPNNDGVDVE 265
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SST V IE+ +GDD V +KSG D G + RPS+ ++VR G+ +GSEM
Sbjct: 266 SSTRVLIENSRFRTGDDSVVIKSGRDLDGRRIGRPSAWVLVR--GNDMGGEDGIALGSEM 323
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKME 226
SGG+ +V + + +R K + RGG +E + +RN+ +E
Sbjct: 324 SGGVHDVFFTDNVLRKGLSAIRFKANLDRGGTVERVRVRNMTVE 367
>gi|59044767|gb|AAW84066.1| pectate lyase [uncultured bacterium]
Length = 471
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/243 (32%), Positives = 122/243 (50%), Gaps = 48/243 (19%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQG--QMWW------DLWWNRTLKHTR------------- 65
I+ TN+ ITG GT++GQ + WW W + + R
Sbjct: 145 FIYAFEQTNIAITG-KGTLNGQSDNEHWWPWNGRAAYGWKEGMSNQRPDRNALFAMAEKG 203
Query: 66 ----------GH-----LVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAP 110
GH ++ N+LI +T RNSP W IHPV CRNV+++ + I +
Sbjct: 204 VPVQERIFGEGHYLRPQFIQPYRCENVLIEGVTIRNSPMWEIHPVLCRNVIVQNVIINS- 262
Query: 111 LNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIV---RRVS 167
+ PN DG +P+S T+V I+DC ++GDD +A+KSG + G + P+ NIIV R
Sbjct: 263 -HGPNNDGCNPESCTDVLIKDCDFDTGDDCIAIKSGRNADGRRLKAPTENIIVTGCRMKD 321
Query: 168 GTTPTCSGVGIGSEMSGGIFNVTVD--QLHVWDAAAGVRIKTDKGRGGYIENITIRNIKM 225
G G+ +GSE+SGG+ N+ +L + +R+K + RGG +EN+ RNI +
Sbjct: 322 GH----GGITVGSEISGGVRNLFASNCRLDSPNLDHALRVKNNAMRGGLLENLHFRNIDV 377
Query: 226 ERV 228
+V
Sbjct: 378 GQV 380
>gi|325106423|ref|YP_004276077.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324975271|gb|ADY54255.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 482
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 130/275 (47%), Gaps = 49/275 (17%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQG--QMWW-----------------------------DL 55
LI+ N+ ITG NG +DG + WW DL
Sbjct: 145 LIYAYEQENIAITG-NGILDGNANNEYWWPWKAKKEYGWKEGIPNQLAAVKILTQQVKDL 203
Query: 56 WWNRTLKHTRGH-----LVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAP 110
R H G ++ S N+LI+++ N+PFW I+PV C NV ++ + ++
Sbjct: 204 VPARERIHGDGSYLRPPFIQPYLSKNVLIADVKIINAPFWNINPVLCENVTVRNVKVVT- 262
Query: 111 LNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTT 170
+ PN DG DP+S NV I CY ++GDD +A+KSG + G +ARP+ N I+
Sbjct: 263 -HGPNNDGCDPESCKNVLITGCYFDTGDDCIAIKSGRNEDGRNIARPAENHIIENCE-MK 320
Query: 171 PTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAG---VRIKTDKGRGGYIENITIRNIKMER 227
GV IGSE+SGG N+ L + D+ +R+KT RGG IEN+ +RN+++
Sbjct: 321 DGHGGVVIGSEISGGARNIFAQNL-IMDSPNLDRILRLKTSSLRGGIIENVYMRNVEVGT 379
Query: 228 VKIPIRISRGSNDHPDEGWDPKALPKIRGISFVNV 262
K + + P + LP IR IS N+
Sbjct: 380 YKEAAILCDMFYEKPGD-----FLPTIRNISVENL 409
>gi|325298060|ref|YP_004257977.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324317613|gb|ADY35504.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 462
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 137/302 (45%), Gaps = 42/302 (13%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK------------------------ 62
I+G L N+ I G GTIDG + W ++ K
Sbjct: 139 FIYGYQLENISIIG-KGTIDGNAGSTFATWKSQQKKGQQLSRDMNHNETPVEERNFGEGY 197
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+ R L++ NI + + NSPFW IH + N++ +G+ A L N DGIDP+
Sbjct: 198 YLRPQLIQFFACKNITLEGVFITNSPFWCIHLLKSENIICRGLRYDAKL--VNNDGIDPE 255
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
+ N+ IE+ +GDD VA+K G D+ G ARPS NII+R GV +GSEM
Sbjct: 256 FTRNLLIENIEFNNGDDNVAIKCGRDNDGWTTARPSENIIIRNCK--FKGLHGVVLGSEM 313
Query: 183 SGGIFNVTVDQL-HVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDH 241
S G+ NV ++ + G+ IKT+ RGG+I NI + N + V+ + ++ +
Sbjct: 314 SAGVQNVFIENCTYGGYCKRGIYIKTNPDRGGFIRNIYVNNCRFGEVE---DLFYATSMY 370
Query: 242 PDEGWDPKALPKIRGISFVNVVSVNTTKAP-VLAG-----IIGTQFEEICMKNVSLLGLA 295
EG D ++ I +V + A VL G I +FE + NV G+
Sbjct: 371 AGEGMDNTHFTEVHDIYVKDVTCQKASAAALVLQGTTVKPIYNVRFENV---NVDQAGIG 427
Query: 296 PS 297
S
Sbjct: 428 LS 429
>gi|390436865|ref|ZP_10225403.1| polygalacturonase [Pantoea agglomerans IG1]
Length = 430
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 118/228 (51%), Gaps = 23/228 (10%)
Query: 26 SLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWN------RTLKHTRGHL----------- 68
++++ + NV + G +GT+DGQG +WW +W +TR L
Sbjct: 90 AMLNINQCRNVTVCG-SGTLDGQGAVWWHKFWGDDENSGMLADYTRRGLRWVVDYDCRRP 148
Query: 69 --VELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTN 126
+ + S + + + T ++S FW +H Y + V ++ + ++ P+TDGID DSS
Sbjct: 149 RNLVVYQSECVTLQDFTSKDSGFWNLHVCYSKQVNLQRLNVMNA-TGPSTDGIDIDSSQL 207
Query: 127 VCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGI 186
V +E C + DD + VKSG +AR + +II+R T SG+ +GSE SGGI
Sbjct: 208 VRVEGCTVSCNDDNICVKSGRGAEAQQLARTARDIIIRDC--TLLKGSGITLGSETSGGI 265
Query: 187 FNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRI 234
NV ++ G RIK+ + RGG+I+NI +R++ ME V P +
Sbjct: 266 ENVIIEHNRFSGTGVGFRIKSARNRGGWIKNIIVRHLIMEDVGYPFML 313
>gi|373462557|ref|ZP_09554274.1| hypothetical protein HMPREF9944_02538 [Prevotella maculosa OT 289]
gi|371948030|gb|EHO65924.1| hypothetical protein HMPREF9944_02538 [Prevotella maculosa OT 289]
Length = 853
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/237 (35%), Positives = 121/237 (51%), Gaps = 13/237 (5%)
Query: 65 RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSS 124
R L+ + N I IS +T SPFW IHP+ C+NV + G+ I PN DG DP+
Sbjct: 210 RPQLINFVKGNRIRISGVTLLRSPFWVIHPLLCKNVTVDGVKIWN--EGPNGDGCDPEGC 267
Query: 125 TNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSG 184
NV I++ +GDD +A+KSG ++ G +PS NII+R GV IGSE+SG
Sbjct: 268 ENVLIQNTLFHTGDDCIAIKSGRNNDGRFWNQPSKNIIIRNCV-MEDGHGGVVIGSEISG 326
Query: 185 GIFNVTVD--QLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
G N+ + ++ + +RIKT+ RGG IENI +R +K+ + K + + + P
Sbjct: 327 GCQNIYAEDCEMDSPELDRVLRIKTNNCRGGLIENINMRRVKVGQCKEAV-VKINLDYEP 385
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEE----ICMKNVSLLGLA 295
E P +R VNV V K+ I+G E I +KN S G++
Sbjct: 386 KEPCYRGFEPVVRN---VNVEDVTCQKSAYGVLIVGRDSVENVTDIRLKNCSFNGIS 439
>gi|254392545|ref|ZP_05007723.1| glycoside hydrolase [Streptomyces clavuligerus ATCC 27064]
gi|197706210|gb|EDY52022.1| glycoside hydrolase [Streptomyces clavuligerus ATCC 27064]
Length = 462
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 142/313 (45%), Gaps = 54/313 (17%)
Query: 26 SLIHGDHLTNVIITGYNGTIDGQG-----QMWWDLWWNRTLK------------------ 62
S I+ ++ ITG GT+DGQG + W D N +
Sbjct: 139 SFIYARGQQDLAITG-RGTLDGQGMAGPWKSWRDPGGNALVDQAELRRMGTEGVPVDQRL 197
Query: 63 -----HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTD 117
H R ++++ + NIL+ ++T P WTIHPV CRNV ++ + ++ +N N+D
Sbjct: 198 FGDGHHLRPNMIQFYDCRNILMQDITVLEPPMWTIHPVLCRNVTLRNVDVIGRIN--NSD 255
Query: 118 GIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVG 177
G+DP+ ++++ I C + DD +AVKSG D G + PS NI++R + GV
Sbjct: 256 GVDPECTSDMLITGCRFHTEDDSIAVKSGRDEDGHRIGVPSRNIVIRDCV-FSGRWGGVA 314
Query: 178 IGSEMSGGIFNVTVDQLHV--------WDAAAGVRIKTDKGRGG-----YIENITIRNIK 224
+GSEMSGG+ +V + + ++ V IKT+K RGG YI T R I
Sbjct: 315 VGSEMSGGVRDVFAEDCRINPVDFPGRYNPRHPVFIKTNKKRGGSITGVYIRRFTGRAID 374
Query: 225 MERVKIPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEI 284
+ V + R + + P IR I ++V +A L G+ F +
Sbjct: 375 RDCVYLTTRYAGQQGERP---------AVIRDIRIEDMVHDGARRAIHLEGLDSDPFTGV 425
Query: 285 CMKNVSLLGLAPS 297
+ G+A +
Sbjct: 426 HIARCRFTGMAQA 438
>gi|357055786|ref|ZP_09116847.1| hypothetical protein HMPREF9467_03819 [Clostridium clostridioforme
2_1_49FAA]
gi|355381906|gb|EHG29017.1| hypothetical protein HMPREF9467_03819 [Clostridium clostridioforme
2_1_49FAA]
Length = 456
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/289 (31%), Positives = 139/289 (48%), Gaps = 33/289 (11%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDL---WWNRTLKHTRGHLVELMNSNNILISNLT 83
I+ N+ I+G G IDG + ++ + R LV + N+I ++
Sbjct: 102 FIYAKDADNIAISG-EGAIDGNAYAFVRQVSPYYVTGDFYPRPTLVYAEHCNHISFKDVI 160
Query: 84 FRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAV 143
RN+PFWT+HP C +V+I G+ IL LN N+DGIDPD STNV I C++ DD + +
Sbjct: 161 MRNAPFWTLHPAGCDDVLISGLRILNDLNVANSDGIDPDHSTNVRIIGCHVTCADDCICL 220
Query: 144 K--SGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAA 201
K SG YG P N+I+ + T T + + IG+E +G NV VD + D+
Sbjct: 221 KSSSGNMEYG-----PLKNVIISGCT-LTSTSAALKIGTEGTGDFENVVVDNCIISDSNR 274
Query: 202 GVRIKTDKGRGGYIENITIRNIKMERVKI---------PIRISRGSND-HPDEGWDPKAL 251
G+ I+ GG + N++ NI +E + PI IS D H G
Sbjct: 275 GISIQIRD--GGNVRNVSFSNIIIETRRFAECWWGCAEPITISTHDRDEHTKSG------ 326
Query: 252 PKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKW 300
I + F N ++ ++ L+G G E+I +NV ++ A S KW
Sbjct: 327 -HISNVRFSN-ITCDSENGVFLSGSRGNHIEDILFENVRVVVRAKS-KW 372
>gi|414864492|tpg|DAA43049.1| TPA: hypothetical protein ZEAMMB73_419161 [Zea mays]
Length = 205
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 70/88 (79%)
Query: 1 MDEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRT 60
M WP+I PLPSYGRGR+ G R+ + I G +LT+VIITG NGTI+GQGQ+WWD + +
Sbjct: 116 MKHWPLIAPLPSYGRGRDEPGPRYSNFIGGSNLTDVIITGKNGTINGQGQVWWDKFHAKE 175
Query: 61 LKHTRGHLVELMNSNNILISNLTFRNSP 88
LK TRGHL+EL+ S+NI+ISN+TF ++P
Sbjct: 176 LKFTRGHLLELLYSDNIIISNVTFVDAP 203
>gi|294816001|ref|ZP_06774644.1| Pectate lyase [Streptomyces clavuligerus ATCC 27064]
gi|326444344|ref|ZP_08219078.1| glycoside hydrolase family 28 [Streptomyces clavuligerus ATCC
27064]
gi|294328600|gb|EFG10243.1| Pectate lyase [Streptomyces clavuligerus ATCC 27064]
Length = 477
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 142/313 (45%), Gaps = 54/313 (17%)
Query: 26 SLIHGDHLTNVIITGYNGTIDGQG-----QMWWDLWWNRTLK------------------ 62
S I+ ++ ITG GT+DGQG + W D N +
Sbjct: 154 SFIYARGQQDLAITG-RGTLDGQGMAGPWKSWRDPGGNALVDQAELRRMGTEGVPVDQRL 212
Query: 63 -----HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTD 117
H R ++++ + NIL+ ++T P WTIHPV CRNV ++ + ++ +N N+D
Sbjct: 213 FGDGHHLRPNMIQFYDCRNILMQDITVLEPPMWTIHPVLCRNVTLRNVDVIGRIN--NSD 270
Query: 118 GIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVG 177
G+DP+ ++++ I C + DD +AVKSG D G + PS NI++R + GV
Sbjct: 271 GVDPECTSDMLITGCRFHTEDDSIAVKSGRDEDGHRIGVPSRNIVIRDCV-FSGRWGGVA 329
Query: 178 IGSEMSGGIFNVTVDQLHV--------WDAAAGVRIKTDKGRGG-----YIENITIRNIK 224
+GSEMSGG+ +V + + ++ V IKT+K RGG YI T R I
Sbjct: 330 VGSEMSGGVRDVFAEDCRINPVDFPGRYNPRHPVFIKTNKKRGGSITGVYIRRFTGRAID 389
Query: 225 MERVKIPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEI 284
+ V + R + + P IR I ++V +A L G+ F +
Sbjct: 390 RDCVYLTTRYAGQQGERP---------AVIRDIRIEDMVHDGARRAIHLEGLDSDPFTGV 440
Query: 285 CMKNVSLLGLAPS 297
+ G+A +
Sbjct: 441 HIARCRFTGMAQA 453
>gi|345299336|ref|YP_004828694.1| glycoside hydrolase family protein [Enterobacter asburiae LF7a]
gi|345093273|gb|AEN64909.1| glycoside hydrolase family 28 [Enterobacter asburiae LF7a]
Length = 430
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 129/257 (50%), Gaps = 36/257 (14%)
Query: 1 MDEWPIIDPLPSYGRGRERLGGRHI----SLIHGDHLTNVIITGYNGTIDGQGQMWWDLW 56
+D++P+ID R+ G + ++I+ + +V ITG GTIDGQG +WW +
Sbjct: 70 LDDYPLIDT---------RVAGIDMRWPAAIINIINCHDVSITG-GGTIDGQGLVWWQRF 119
Query: 57 WN-------------RTLK------HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYC 97
W R L+ R + + S I + + T R S FW +H Y
Sbjct: 120 WGDDEQGGMLGDYSARGLRWVVDYDCQRPRNILVYESERITLRDFTSRESGFWNVHLCYS 179
Query: 98 RNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARP 157
R++ + + I + P+TDGID DS V +E C + DD + +K+G + AR
Sbjct: 180 RHITLDSVQI-SNSAGPSTDGIDIDSCEQVRVERCVVSCNDDNICIKAGRGQEAASKARS 238
Query: 158 SSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIEN 217
+ +I++R T + SG+ +GSE SGGI V ++ G RIK+ + RGG+I +
Sbjct: 239 ARDIVIRDC--TPNSGSGITLGSETSGGIERVLIEHNRFNGTGVGFRIKSARNRGGFIRD 296
Query: 218 ITIRNIKMERVKIPIRI 234
I +R++++ V+ P+ I
Sbjct: 297 IKVRHLQLVDVRFPVMI 313
>gi|333382504|ref|ZP_08474174.1| hypothetical protein HMPREF9455_02340 [Dysgonomonas gadei ATCC
BAA-286]
gi|332828815|gb|EGK01507.1| hypothetical protein HMPREF9455_02340 [Dysgonomonas gadei ATCC
BAA-286]
Length = 717
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 115/216 (53%), Gaps = 29/216 (13%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWW---------------NRTLKHTRGHLVELMNSNNILI 79
NV+++G G + QG+++WD +W + K R LV S+++ +
Sbjct: 143 NVMVSG-EGVVHAQGKVFWDSYWAMRKDYEAKGLRWIVDYDCKRPRTLLVS--ESSDVTV 199
Query: 80 SNLTFRNSPFWTIHPVYCRNVVIKGMTILAPL--NAPNTDGIDPDSSTNVCIEDCYIESG 137
LTFR + FWTI +Y + G+ I + + P+TDG+D DSS+ + +E+C I+
Sbjct: 200 KGLTFRQAGFWTIQILYSSYCTVDGVIIQNNVGGHGPSTDGVDIDSSSYILVENCDIDCN 259
Query: 138 DDLVAVKSGWDHYGIAMARPSSNIIVR----RVSGTTPTCSGVGIGSEMSGGIFNVTVDQ 193
DD +KSG D G+ + RP+ I++R R G TC GSE SGGI +V +
Sbjct: 260 DDNFCLKSGRDADGLRVNRPTEYIVIRNCISRAGGGLLTC-----GSETSGGIRHVLAEG 314
Query: 194 LHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVK 229
L G+R+K+ RGG E+I IR+++M+ V+
Sbjct: 315 LKAKGTTVGIRLKSAMNRGGTTEHIYIRDVEMDNVR 350
>gi|423221752|ref|ZP_17208222.1| hypothetical protein HMPREF1062_00408 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392645616|gb|EIY39340.1| hypothetical protein HMPREF1062_00408 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 461
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/245 (33%), Positives = 118/245 (48%), Gaps = 25/245 (10%)
Query: 65 RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSS 124
R + L NIL+ T +PFW IHP+ NV I+ + + + + N DG DP+S
Sbjct: 208 RPQFINLYKCKNILLEGFTINRAPFWLIHPLLSENVTIRKVKMQS--HGYNNDGCDPESC 265
Query: 125 TNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSG 184
NV IEDC ++GDD +A+KSG D G PS NIIVR +GV IGSE++G
Sbjct: 266 NNVLIEDCDFDTGDDCIAIKSGRDEDGRFWNIPSENIIVRNCR-MKDGHAGVAIGSEVTG 324
Query: 185 GIFNVTVDQLHVWDAAAG--VRIKTDKGRGGYIENITIRNIKMERVKIPI--------RI 234
G NV V+ + +RIK++ RGG +EN+ +RNI + K I R+
Sbjct: 325 GCRNVWVENCRMDSPELDRIIRIKSNAIRGGEVENLFVRNIFVGECKESILGIEMKYWRV 384
Query: 235 SRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIG-TQFEEICMKNVSLLG 293
+G LP I N++S + L G TQ ++I +K+ G
Sbjct: 385 EKGP-----------YLPYFHNIYLENIISKKSQYVLHLDGFEDKTQIQDIFIKDCVFDG 433
Query: 294 LAPSA 298
+ S
Sbjct: 434 VGEST 438
>gi|284039631|ref|YP_003389561.1| glycoside hydrolase family protein [Spirosoma linguale DSM 74]
gi|283818924|gb|ADB40762.1| glycoside hydrolase family 28 [Spirosoma linguale DSM 74]
Length = 551
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 114/240 (47%), Gaps = 19/240 (7%)
Query: 65 RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSS 124
R +LV L N +L+ +TF+NSP W +HP+ C+++ ++ +T P A N DG+D +S
Sbjct: 224 RPNLVVLTNCKKVLLEGVTFQNSPAWCLHPLMCQDLTLRNVTTKNPEYAHNGDGMDIESC 283
Query: 125 TNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSG 184
N IE C ++ GDD + +KSG D G P+ N I+R + G +GSEMSG
Sbjct: 284 KNFLIEGCTLDVGDDAICIKSGKDEEGRKRGMPTENGIIRN-NTVYNGHGGFVVGSEMSG 342
Query: 185 GIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMER-------------VKIP 231
G + V G+R K+ +GRGG +E+I ++I M+ VK
Sbjct: 343 GARYLFVSNCTFMGTDKGLRFKSVRGRGGVVEHIYAKDIFMKNIAQEAIFFDMYYFVKFA 402
Query: 232 IRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 291
R +EG P R + F N+V K + G+ + I M N+ L
Sbjct: 403 TDGERDERPVVNEG-----TPVFRNMRFENIVCTGAKKGIFVRGLPEMAIQTIAMANMVL 457
>gi|323451042|gb|EGB06920.1| hypothetical protein AURANDRAFT_65104 [Aureococcus anophagefferens]
Length = 915
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 140/315 (44%), Gaps = 72/315 (22%)
Query: 3 EWPIIDPLPSYG--------------RGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQ 48
++P+++P+ YG RG RH ++ + +NV + G G IDG+
Sbjct: 443 QYPLMEPVVGYGWSRDTNCFPANSTRRGFREGARRHAPVVGAYNASNVSVVG-GGVIDGR 501
Query: 49 GQMWWDLWWNRT-------------------LKHTRGHLVELMNSNNILISN------LT 83
W N T L +R L+E + ++ L
Sbjct: 502 AGEPLGWWDNCTRCRGARPPDPAFPPDEAFCLAASRPKLLEFQYVTGLTVAGNAVGDPLH 561
Query: 84 FRNSPFWTIHPVYCRNVVIKGMTILAPLNAP---NTDGIDPDSSTNVCIEDCYIESGDDL 140
++SPFWT+ P Y RNV ++ + I AP+ P NTDG +E+ Y+ + DD
Sbjct: 562 LKDSPFWTLTPSYSRNVRVRDLRITAPIRTPGIGNTDG----------VENVYVNNSDDG 611
Query: 141 VAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTC---------SGVGIGSEMSGGIFNVTV 191
V +KSG D +GI +A P+ +++VR + TC G +GSEMSGG+ NVT
Sbjct: 612 VCMKSGLDGFGINLAIPTEDVLVRNI-----TCGDRRDDAGRGGFAVGSEMSGGVRNVTF 666
Query: 192 DQ--LHVWDAAAGVRIKTDKGRGGYIENITIRNIKMER--VKIPIRISRGSNDHPDEGWD 247
L + G+ +KT GRGGYI ++T NI+ K + + D PD D
Sbjct: 667 RDSVLGAGPQSRGIDVKTSVGRGGYIIDVTFENIRAPSPFPKANVNVHSALRDDPDVPGD 726
Query: 248 PKALPKIRGISFVNV 262
+P I + F NV
Sbjct: 727 -DLVPVIGNLRFANV 740
>gi|86143268|ref|ZP_01061670.1| exo-poly-alpha-D-galacturonosidase precursor [Leeuwenhoekiella
blandensis MED217]
gi|85830173|gb|EAQ48633.1| exo-poly-alpha-D-galacturonosidase precursor [Leeuwenhoekiella
blandensis MED217]
Length = 547
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 119/236 (50%), Gaps = 16/236 (6%)
Query: 68 LVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNV 127
+V L++ NIL+ TF+NSP W IHP+ +N++++ +T+ P A N DG+D +S NV
Sbjct: 224 MVSLVDCENILLDGPTFQNSPAWNIHPLMSKNIIVRNLTVRNPWYAQNGDGLDLESCENV 283
Query: 128 CIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIF 187
+ + + GDD + +KSG + G P+ N+I++ + G +GSEMSGG+
Sbjct: 284 LVYNNTFDVGDDAICIKSGKNEDGRKRNMPTQNVIIKN-NTVYHGHGGFVVGSEMSGGVS 342
Query: 188 NVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVK---IPIRISRG------S 238
+ + + G+R K+ +GRGG +E I I +I M +K I + G S
Sbjct: 343 KIHISHCNFIGTDTGLRFKSTRGRGGVVEQIYISHIYMNEIKTDAIRFNLYYGGQAPDLS 402
Query: 239 NDHPDEGWD---PKA---LPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKN 288
ND + D P+ P + I ++ SV K+ G+ + + +KN
Sbjct: 403 NDLAENTEDRDVPEVTIETPSFKDIYISDITSVKAHKSGFFMGLPEMNIQNVSIKN 458
>gi|146301851|ref|YP_001196442.1| glycoside hydrolase [Flavobacterium johnsoniae UW101]
gi|146156269|gb|ABQ07123.1| Polygalacturonase-like protein; Glycoside hydrolase family 28
[Flavobacterium johnsoniae UW101]
Length = 560
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 120/242 (49%), Gaps = 16/242 (6%)
Query: 65 RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSS 124
R +V + NS +L F+NSP W IHP +++++ +T+ P + N DG+D +
Sbjct: 231 RPVMVSIQNSKRVLFDGPVFQNSPAWNIHPFMVEDLIVRNVTVRNPWYSQNGDGLDVECC 290
Query: 125 TNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSG 184
NV +E+ + GDD + +KSG D G+ P NIIVR + GV +GSEMSG
Sbjct: 291 KNVLVENSSFDVGDDAICIKSGKDKDGLERGIPCENIIVRN-NIVYHGHGGVTVGSEMSG 349
Query: 185 GIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERV---KIPIRISRGSN-- 239
G+ N+ V G+R K+ +GRGG +ENI I ++ M + I + G
Sbjct: 350 GVKNLHVSNCTFMGTDVGLRFKSARGRGGVVENIFISDVFMTDIPSQAISFNLYYGGKSI 409
Query: 240 -DHPDEGWDP---KAL------PKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV 289
+ +EG D KA+ P+ + IS N+ +A L G+ E I + N+
Sbjct: 410 AETLEEGGDKIVNKAMPVTIETPQFKNISIKNITIKGAQQAVFLQGLPEMNLENIEISNL 469
Query: 290 SL 291
++
Sbjct: 470 TV 471
>gi|266621133|ref|ZP_06114068.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
gi|288867222|gb|EFC99520.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
Length = 517
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 137/281 (48%), Gaps = 20/281 (7%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNR--TLKHT-RGHLVELMNSNNILISNLT 83
+I+G + NV+I G G IDGQ ++ WW T++ R +V L +I +
Sbjct: 182 IINGIEVENVVIYG-EGLIDGQAS--FENWWKDAGTMRGAFRPRMVFLERCKDITLQGFY 238
Query: 84 FRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAV 143
+NSP W +HP + + + + I P ++PNTDG+DP+S +V I + GDD +AV
Sbjct: 239 LKNSPAWVLHPYFSQGLRFLDLDIENPADSPNTDGLDPESCKDVEITGLHFSLGDDCIAV 298
Query: 144 KSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGV 203
KSG + G PS NI +R+ V +GSE+ G+ V V G+
Sbjct: 299 KSGKIYMGRRYKTPSENIEIRQCLMENGH-GAVTVGSEVGAGVKAVRVRDCLFRHTDRGL 357
Query: 204 RIKTDKGRG--GYIENITIRNIKMERVKIPIRISRGSNDHPDEGWD----------PKAL 251
R+KT +GRG + +I+ ++I M+ V P ++ PD + +
Sbjct: 358 RVKTRRGRGKDSVLSDISFQHIVMDHVMTPFVVNSFYFCDPDGKTEYVQCREALPADERT 417
Query: 252 PKIRGISFVNVVSVNT-TKAPVLAGIIGTQFEEICMKNVSL 291
P+I+ +SF ++ + N A L G+ + +I ++NV +
Sbjct: 418 PEIQNLSFTDIKAANCHAAASFLCGLPEQKIRQIELRNVDI 458
>gi|329956221|ref|ZP_08296901.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328524695|gb|EGF51756.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 506
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 91/169 (53%), Gaps = 1/169 (0%)
Query: 57 WNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNT 116
W R +V L+ N+ + + F+NSP W +HP+ C NV+++ + + P A N
Sbjct: 219 WQSVRHFLRPVMVSLIECKNVWLQGVIFQNSPAWNLHPLMCENVLVEDVQVRNPSYAQNG 278
Query: 117 DGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGV 176
DG+D +S N I + + GDD + +KSG D G ARP N++V + G
Sbjct: 279 DGLDLESCKNALIVNSTFDVGDDGICLKSGKDEDGRRRARPCENVVVDGCT-VFKGHGGF 337
Query: 177 GIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKM 225
+GSEMSGG+ NV+V G+R K+ +GRGG +ENI I N+ M
Sbjct: 338 VVGSEMSGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGIVENIWITNVSM 386
>gi|427384333|ref|ZP_18880838.1| hypothetical protein HMPREF9447_01871 [Bacteroides oleiciplenus YIT
12058]
gi|425727594|gb|EKU90453.1| hypothetical protein HMPREF9447_01871 [Bacteroides oleiciplenus YIT
12058]
Length = 506
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 122/266 (45%), Gaps = 24/266 (9%)
Query: 57 WNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNT 116
W R +V L+ N+ + + F+NSP W +HP+ C NV+I+ + + P A N
Sbjct: 219 WQSVRHFLRPVMVSLIECKNVWLQGVIFQNSPAWNLHPLMCENVLIEEVQVRNPSYAQNG 278
Query: 117 DGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGV 176
DG+D +S N I + + GDD + +KSG D G R N++V + G
Sbjct: 279 DGLDLESCKNTLIVNSTFDVGDDGICLKSGKDEDGRIRGRVCENVVVDGCT-VFKGHGGF 337
Query: 177 GIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERV-------- 228
+GSEMSGG+ NV+V G+R K+ +GRGG +ENI IRNI M +
Sbjct: 338 VVGSEMSGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGVVENIWIRNISMIDIPTEPITFN 397
Query: 229 -----KIPIRISRGSNDHPDEGWDP----KALPKIRGISFVNVVSVNTTKAPVLAGIIGT 279
K + + P + +P + P R I N+V +A GI
Sbjct: 398 LYYGGKSAVEVLESGEVVPAK-VEPMPVDETTPCFRNIHVENLVCAGARRALFFNGIPEM 456
Query: 280 QFEEICMKNVSLLGLAPSAKWQCQFV 305
+ I +KNV + S+K +FV
Sbjct: 457 PIDGITLKNVDI-----SSKLGAEFV 477
>gi|337750378|ref|YP_004644540.1| glycoside hydrolase family protein [Paenibacillus mucilaginosus
KNP414]
gi|336301567|gb|AEI44670.1| glycoside hydrolase family 28 [Paenibacillus mucilaginosus KNP414]
Length = 530
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 91/172 (52%), Gaps = 1/172 (0%)
Query: 57 WNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNT 116
+ + R +L+ L +L+ TF+NSP W +HP C +V ++G+T+ P N
Sbjct: 198 YEAARDYLRPNLLSLRRCKYVLLEGATFQNSPAWNLHPWACEHVTLRGVTVRNPWYGQNG 257
Query: 117 DGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGV 176
DG+D DS +EDC + GDD + +KSG D G + P +I++R G
Sbjct: 258 DGLDLDSCRYGLVEDCSFDVGDDAICIKSGKDEAGRELGIPCEDILIRNCR-VYHGHGGF 316
Query: 177 GIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERV 228
IGSEMSGG+ + V+ G+R K+ +GRGG +E+I I I+M +
Sbjct: 317 VIGSEMSGGVRRLRVEDCTFMGTDIGLRFKSTRGRGGLVEDIEIERIRMNSI 368
>gi|116619802|ref|YP_821958.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116222964|gb|ABJ81673.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 535
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 118/238 (49%), Gaps = 8/238 (3%)
Query: 65 RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSS 124
R V M S N+LI L F SP WTIH +Y NVV++ + I+ +TDGI DSS
Sbjct: 187 RPSFVRTMESRNVLIEGLQFVGSPMWTIHLLYSDNVVVRDV-IIETYPGVHTDGIAVDSS 245
Query: 125 TNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSG 184
NV I +CYI++GDD + +K+G D G+ + RP+ N+ + S V IGSE SG
Sbjct: 246 RNVRISNCYIDTGDDGIVIKAGKDSDGLRVNRPTENVSITNCS-VHHAHGAVTIGSETSG 304
Query: 185 GIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPDE 244
+ N+ + GVRIK+ +GRGG +E++ N ME V + I +N + E
Sbjct: 305 WVRNLVASNITCDGTQMGVRIKSRRGRGGGVEDVRFDNWTMENVGTAVNI---TNYYLME 361
Query: 245 GWDPKALPKI---RGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAK 299
G P P+ R F N+ N T I E+ + N+ + SAK
Sbjct: 362 GEKPANDPEPVSNRTPVFRNIAISNMTVNHARVAIDIEGLPEMNVSNLRISDFIGSAK 419
>gi|313114438|ref|ZP_07799963.1| polygalacturonase [Faecalibacterium cf. prausnitzii KLE1255]
gi|310623236|gb|EFQ06666.1| polygalacturonase [Faecalibacterium cf. prausnitzii KLE1255]
Length = 510
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 141/281 (50%), Gaps = 20/281 (7%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKHT--RGHLVELMNSNNILISNLTF 84
L++ + +V++TG GT+D + D W +K R V ++S NI + +T
Sbjct: 175 LLNITQVHDVVVTG-EGTLDCDAENG-DWWVTPKIKRIAWRPRAVAAVDSENICLHGITV 232
Query: 85 RNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVK 144
+NS WTIHP++ +++ + I P NAPNTDGIDP+S + I I GDD +A+K
Sbjct: 233 QNSYSWTIHPIFVKHLDLLNFNINNPYNAPNTDGIDPESCEYIRIIGVNIHVGDDCIAMK 292
Query: 145 SGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVR 204
+ G+ + + + ++R G+ IGSEMSGG+ ++ V Q + G+R
Sbjct: 293 ASKVFLGMKLKKSCEHTVIRNCL-LDKGHGGIVIGSEMSGGVKDMVVTQCLMDHTDRGLR 351
Query: 205 IKTDKGRG--GYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDP-----------KAL 251
+KT +GRG I+ + RN++M VK P I+ PD G P +
Sbjct: 352 VKTRRGRGNTAVIDGLVFRNVEMRGVKAPFVINMFYFCDPD-GHGPYVQCRDAMPVDEYT 410
Query: 252 PKIRGISFVNVVSVNTTKAPV-LAGIIGTQFEEICMKNVSL 291
PK+ ++ ++V+ + A G+ E + MKNV++
Sbjct: 411 PKLGSLTMEDIVATDAQFAGCYFDGLPEQPIERVSMKNVTI 451
>gi|150004535|ref|YP_001299279.1| glycoside hydrolase [Bacteroides vulgatus ATCC 8482]
gi|319643966|ref|ZP_07998541.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345518227|ref|ZP_08797681.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|423312455|ref|ZP_17290392.1| hypothetical protein HMPREF1058_01004 [Bacteroides vulgatus
CL09T03C04]
gi|149932959|gb|ABR39657.1| glycoside hydrolase family 28 [Bacteroides vulgatus ATCC 8482]
gi|254835520|gb|EET15829.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|317384490|gb|EFV65457.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|392688143|gb|EIY81432.1| hypothetical protein HMPREF1058_01004 [Bacteroides vulgatus
CL09T03C04]
Length = 539
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 138/335 (41%), Gaps = 76/335 (22%)
Query: 43 GTIDGQGQMWW------------------------DLWWNRTLKHTRGHLVELMNSNNIL 78
G +D G++W+ D W+ R L+ + N +L
Sbjct: 195 GVVDADGRIWYPSEGALKGAILSKDNFNVPRGELTDSDWDYMRDWLRPVLLSFIKCNKVL 254
Query: 79 ISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGD 138
+ TF+NSP W +HP+ C N+ I +T+ P + N D +D +S I + ++GD
Sbjct: 255 LEGATFKNSPSWCLHPLSCENITINKVTVSNPWYSQNGDALDLESCNKALIINNSFDAGD 314
Query: 139 DLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWD 198
D + +KSG D G P N+IV + G +GSEMSGG+ N+ VD
Sbjct: 315 DGICIKSGKDEQGRKRGEPCQNVIVMN-NTVLHGHGGFVVGSEMSGGVNNIYVDNCTFMG 373
Query: 199 AAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRI----------SRGSNDHPDEGWDP 248
G+R K+++GRGG +ENI I NI M + IP RG + + DE
Sbjct: 374 TDVGLRFKSNRGRGGLVENIYISNINM--INIPNEALIFNLYYGGKGRGEDPNQDEKKAE 431
Query: 249 KALP----------------------------------KIRGISFVNVVSVNTTKAPVLA 274
+P +I+ I+ N++ N +
Sbjct: 432 TTIPPVTEETPIFRNIFIKDVTCNGAGRAVFFNGLPEMRIKNINMENIIVSNAKE----- 486
Query: 275 GIIGTQFEEICMKNVSLLGLAPSAKWQCQFVSGFT 309
G++ ++ +E+ MKN+ + L + Q VS T
Sbjct: 487 GVVLSEADEVNMKNIKIELLKSGKNLKMQNVSNVT 521
>gi|294674151|ref|YP_003574767.1| pectinase family protein/glycosyl hydrolase family 88 [Prevotella
ruminicola 23]
gi|294473505|gb|ADE82894.1| pectinase family protein/glycosyl hydrolase family 88 [Prevotella
ruminicola 23]
Length = 1596
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/254 (32%), Positives = 124/254 (48%), Gaps = 18/254 (7%)
Query: 65 RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSS 124
R LV IL+ ++T SPFW IHP++ ++ ++ + ++ + PN DG DP+
Sbjct: 219 RPQLVSFNKCEGILLEDVTLLRSPFWVIHPLHSTDITVRRVKMIN--DGPNGDGCDPECC 276
Query: 125 TNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSG 184
V IEDC+ +GDD +A+KSG + G PS NII+R GV +GSE+SG
Sbjct: 277 DRVLIEDCFFNTGDDCIAIKSGRNRDGRERNMPSKNIIIRNCEMKNGH-GGVVVGSEISG 335
Query: 185 GIFNVTVDQ--LHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVK---IPIRISRGSN 239
G NV + + +RIKT+ RGG IENI +RNI + + K + I + N
Sbjct: 336 GCQNVYAHDCVMDSPELERVLRIKTNSCRGGIIENINMRNITVGKCKESVLKINLDYEHN 395
Query: 240 DHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQF-EEICMKNVSLLGLAPSA 298
+ G+ P +R + NV S + + G+ F +I +KN G+
Sbjct: 396 EICCRGY----YPIVRNVYMENVTSQQSQYGVQIIGLDEDTFVYDINVKNCHFNGVKSG- 450
Query: 299 KWQCQFVSGFTSQV 312
F+SG T V
Sbjct: 451 ----NFMSGKTRNV 460
>gi|261406869|ref|YP_003243110.1| glycoside hydrolase family protein [Paenibacillus sp. Y412MC10]
gi|261283332|gb|ACX65303.1| glycoside hydrolase family 28 [Paenibacillus sp. Y412MC10]
Length = 475
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 142/346 (41%), Gaps = 56/346 (16%)
Query: 23 RHISLIHGDHLTNVIITGYNGTIDGQGQMW------------WD------------LWW- 57
R + I+G+ L NV ITG G DG G+ W W +WW
Sbjct: 114 RCMPAIYGEDLENVAITG-TGIFDGSGEAWRPVKRMKLTEGQWKQLIQSGGYEEGGVWWP 172
Query: 58 -NRTLK------------------------HTRGHLVELMNSNNILISNLTFRNSPFWTI 92
++LK H R LV+L +L TFRNSP W +
Sbjct: 173 TEQSLKSAALVKSLIAQNVQDPSAFEPARDHLRPTLVQLDRCRKVLFDGPTFRNSPAWNV 232
Query: 93 HPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGI 152
HP C +V I+ ++I ++ N DG+D DS I D + GDD + +KSG D G
Sbjct: 233 HPWLCEHVTIRNVSIRNQWHSQNGDGLDLDSCRYANIYDSVFDVGDDAICIKSGKDADGR 292
Query: 153 AMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRG 212
A+A P+ + +R G IGSEMSG + N+ + AG+R K+ +GRG
Sbjct: 293 ALAVPTEYVTIRNCQ-VFHGHGGFVIGSEMSGDVRNIAITDCVFIGTDAGLRFKSTRGRG 351
Query: 213 GYIENITIRNIKMERV-KIPIRIS---RGSNDHPDEGWDPKALPKIRGISFVNVVSVNTT 268
G +E I IR + M+ + K I S G N+ D + P R + +
Sbjct: 352 GTVERIYIRGVLMKEIAKEAIIFSSYYSGKNNTDDPVAVTEETPVFRDFHISDTTCIGAH 411
Query: 269 KAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQCQFVSGFTSQVFP 314
A + G+ E I V L + + ++ ++V P
Sbjct: 412 TALHIKGLPEMPIENIVFDRVQLTARNGATCTNARNITFRQTKVLP 457
>gi|384047530|ref|YP_005495547.1| glycoside hydrolase Family 28 [Bacillus megaterium WSH-002]
gi|345445221|gb|AEN90238.1| Glycoside Hydrolase Family 28 [Bacillus megaterium WSH-002]
Length = 465
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 92/282 (32%), Positives = 141/282 (50%), Gaps = 57/282 (20%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQG--QMWW---------------------DLWWNRTLKH 63
LI+ + N+ ITG GT+DGQG + WW DL + +
Sbjct: 139 LIYAYNEKNIAITG-EGTLDGQGDNEHWWPWKGKKEFGWKEGEPNQQQDRDLLFKMAEEK 197
Query: 64 T--------RGH-----LVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAP 110
+GH ++ +S NI+I +T NSP W I+PV N++I + I+
Sbjct: 198 VPVKERVFGKGHYLRPSFIQPYHSKNIMIKGVTILNSPMWQINPVLSENILIDDVKIIG- 256
Query: 111 LNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTT 170
+ PN DG+DP+SS NV I+D Y ++GDD +A+KSG + G + PS NII+ +
Sbjct: 257 -HGPNNDGVDPESSKNVLIKDSYFDNGDDCIAIKSGRNADGRRINVPSENIIIEG-NEMK 314
Query: 171 PTCSGVGIGSEMSGGIFNVTVDQLHVWDAA---AGVRIKTDKGRGGYIENI-----TIRN 222
GV IGSE+SG + NV Q +V D+ +RIKT+ RGG IE+I T+++
Sbjct: 315 DGHGGVVIGSEISGSVRNVFA-QHNVMDSPNLDRALRIKTNSVRGGTIEDIDFSNNTVKS 373
Query: 223 IKMERVKIPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVS 264
+ E ++I + + +EG P +R I+ N+ S
Sbjct: 374 VGSEVIQIDM--------YYEEGDTGNFTPVVRNINIENLQS 407
>gi|237708712|ref|ZP_04539193.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|265756017|ref|ZP_06090484.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|345513499|ref|ZP_08793020.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|423242356|ref|ZP_17223465.1| hypothetical protein HMPREF1065_04088 [Bacteroides dorei
CL03T12C01]
gi|229437348|gb|EEO47425.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|229457138|gb|EEO62859.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|263234095|gb|EEZ19696.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|392639642|gb|EIY33458.1| hypothetical protein HMPREF1065_04088 [Bacteroides dorei
CL03T12C01]
Length = 539
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 125/288 (43%), Gaps = 44/288 (15%)
Query: 43 GTIDGQGQMWW------------------------DLWWNRTLKHTRGHLVELMNSNNIL 78
G +D G++W+ D W+ R L+ + N +L
Sbjct: 195 GVVDADGRIWYPSEGALKGAILSKDNFNVPRGELTDSDWDYMRDWLRPVLLSFIKCNKVL 254
Query: 79 ISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGD 138
+ TF+NSP W +HP+ C N+ I +T+ P + N D +D +S I + ++GD
Sbjct: 255 LEGATFKNSPSWCLHPLSCENITINKVTVSNPWYSQNGDALDLESCNKALIINNSFDAGD 314
Query: 139 DLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWD 198
D + +KSG D G P N+IV + G +GSEMSGG+ N+ VD
Sbjct: 315 DGICIKSGKDEQGRKRGEPCQNVIVMN-NTVLHGHGGFVVGSEMSGGVNNIYVDNCTFMG 373
Query: 199 AAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRI----------SRGSNDHPDEGWDP 248
G+R K+++GRGG +ENI I NI M + IP RG + + DE
Sbjct: 374 TDVGLRFKSNRGRGGLVENIYISNINM--INIPNEALIFNLYYGGKGRGEDPNQDEKKAE 431
Query: 249 KALPKI-------RGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV 289
+P + R I +V +A G+ + + I M+N+
Sbjct: 432 TTIPPVTEETPIFRNIFIKDVTCNGAGRAVFFNGLPEMRIKNINMENI 479
>gi|294778294|ref|ZP_06743720.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|294447922|gb|EFG16496.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 539
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 117/253 (46%), Gaps = 20/253 (7%)
Query: 54 DLWWNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNA 113
D W+ R L+ + N +L+ TF+NSP W +HP+ C N+ I +T+ P +
Sbjct: 230 DSDWDYMRDWLRPVLLSFIKCNKVLLEGATFKNSPSWCLHPLSCENITINKVTVSNPWYS 289
Query: 114 PNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTC 173
N D +D +S I + ++GDD + +KSG D G P N+IV +
Sbjct: 290 QNGDALDLESCNKALIINNSFDAGDDGICIKSGKDEQGRKRGEPCQNVIVMN-NTVLHGH 348
Query: 174 SGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIR 233
G +GSEMSGG+ N+ VD G+R K+++GRGG +ENI I NI M + IP
Sbjct: 349 GGFVVGSEMSGGVNNIYVDNCTFMGTDVGLRFKSNRGRGGLVENIYISNINM--INIPNE 406
Query: 234 I----------SRGSNDHPDEGWDPKALPKI-------RGISFVNVVSVNTTKAPVLAGI 276
RG + + DE +P + R I +V +A G+
Sbjct: 407 ALIFNLYYGGKGRGEDPNQDEKKAETTIPPVTEETPIFRNIFIKDVTCNGAGRAVFFNGL 466
Query: 277 IGTQFEEICMKNV 289
+ + I M+N+
Sbjct: 467 PEMRIKNINMENI 479
>gi|423228811|ref|ZP_17215217.1| hypothetical protein HMPREF1063_01037 [Bacteroides dorei
CL02T00C15]
gi|423247623|ref|ZP_17228671.1| hypothetical protein HMPREF1064_04877 [Bacteroides dorei
CL02T12C06]
gi|392631516|gb|EIY25487.1| hypothetical protein HMPREF1064_04877 [Bacteroides dorei
CL02T12C06]
gi|392635550|gb|EIY29449.1| hypothetical protein HMPREF1063_01037 [Bacteroides dorei
CL02T00C15]
Length = 539
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 125/288 (43%), Gaps = 44/288 (15%)
Query: 43 GTIDGQGQMWW------------------------DLWWNRTLKHTRGHLVELMNSNNIL 78
G +D G++W+ D W+ R L+ + N +L
Sbjct: 195 GVVDADGRIWYPSEGALKGAILSKDNFNVPRGELTDSDWDYMRDWLRPVLLSFIKCNKVL 254
Query: 79 ISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGD 138
+ TF+NSP W +HP+ C N+ I +T+ P + N D +D +S I + ++GD
Sbjct: 255 LEGATFKNSPSWCLHPLSCENITINKVTVSNPWYSQNGDALDLESCNKALIINNSFDAGD 314
Query: 139 DLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWD 198
D + +KSG D G P N+IV + G +GSEMSGG+ N+ VD
Sbjct: 315 DGICIKSGKDEQGRKRGEPCQNVIVMN-NTVLHGHGGFVVGSEMSGGVNNIYVDNCTFMG 373
Query: 199 AAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRI----------SRGSNDHPDEGWDP 248
G+R K+++GRGG +ENI I NI M + IP RG + + DE
Sbjct: 374 TDVGLRFKSNRGRGGLVENIYISNINM--INIPNEALIFNLYYGGKGRGEDPNQDEKKAE 431
Query: 249 KALPKI-------RGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV 289
+P + R I +V +A G+ + + I M+N+
Sbjct: 432 TTIPPVTEETPIFRNIFIKDVTCNGAGRAVFFNGLPEMRIKNINMENI 479
>gi|212693553|ref|ZP_03301681.1| hypothetical protein BACDOR_03070 [Bacteroides dorei DSM 17855]
gi|212663806|gb|EEB24380.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
Length = 539
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 125/288 (43%), Gaps = 44/288 (15%)
Query: 43 GTIDGQGQMWW------------------------DLWWNRTLKHTRGHLVELMNSNNIL 78
G +D G++W+ D W+ R L+ + N +L
Sbjct: 195 GVVDADGRIWYPSEGALKGAILSKDNFNVPRGELTDSDWDYMRDWLRPVLLSFIKCNKVL 254
Query: 79 ISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGD 138
+ TF+NSP W +HP+ C N+ I +T+ P + N D +D +S I + ++GD
Sbjct: 255 LEGATFKNSPSWCLHPLSCENITINKVTVSNPWYSQNGDALDLESCNKALIINNSFDAGD 314
Query: 139 DLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWD 198
D + +KSG D G P N+IV + G +GSEMSGG+ N+ VD
Sbjct: 315 DGICIKSGKDEQGRKRGEPCQNVIVMN-NTVLHGHGGFVVGSEMSGGVNNIYVDNCTFMG 373
Query: 199 AAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRI----------SRGSNDHPDEGWDP 248
G+R K+++GRGG +ENI I NI M + IP RG + + DE
Sbjct: 374 TDVGLRFKSNRGRGGLVENIYISNINM--INIPNEALIFNLYYGGKGRGEDPNQDEKKAE 431
Query: 249 KALPKI-------RGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV 289
+P + R I +V +A G+ + + I M+N+
Sbjct: 432 TTIPPVTEETPIFRNIFIKDVTCNGAGRAVFFNGLPEMRIKNINMENI 479
>gi|325299780|ref|YP_004259697.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324319333|gb|ADY37224.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 461
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/252 (34%), Positives = 125/252 (49%), Gaps = 18/252 (7%)
Query: 62 KHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDP 121
K R + L NIL+ T SPFW IHP+ N+ ++ + + + + N DG DP
Sbjct: 203 KGIRPQFINLYKCKNILLEGFTLHRSPFWLIHPLLSENITVRKVILQS--HGRNNDGCDP 260
Query: 122 DSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSE 181
+S NV I+ C ++GDD +A+KSG D G PS NIIVR +GV IGSE
Sbjct: 261 ESCKNVLIDSCSFDTGDDCIAIKSGRDEDGRYWNIPSENIIVRNCL-MKDGHAGVAIGSE 319
Query: 182 MSGGIFNVTVDQLHVWDAAAG--VRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSN 239
++GG NV V+ + +RIK++ RGG ++NI +R+I + K I +
Sbjct: 320 ITGGCQNVWVENCRMDSPELDRIIRIKSNSERGGEVKNIFVRDITVGECKESILGIELNY 379
Query: 240 DHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGT----QFEEICMKNVSLLGLA 295
H ++G P P I N+ S K+ L I GT Q +I +KN + G+A
Sbjct: 380 WHVEDGPYP---PYFHNIHLENITS---QKSNYLLHIDGTEGKIQARDIFIKNCTFNGIA 433
Query: 296 PSAKWQCQFVSG 307
A +VSG
Sbjct: 434 RPA---INYVSG 442
>gi|139438280|ref|ZP_01771833.1| Hypothetical protein COLAER_00822 [Collinsella aerofaciens ATCC
25986]
gi|133776477|gb|EBA40297.1| polygalacturonase (pectinase) [Collinsella aerofaciens ATCC 25986]
Length = 531
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/316 (29%), Positives = 144/316 (45%), Gaps = 31/316 (9%)
Query: 24 HISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKH----------TRGHLVELMN 73
+ S G + +V I G G IDGQ D WWN+ K+ R ++ L
Sbjct: 184 YCSTFTGLGVHDVCIYG-RGAIDGQTDFAEDNWWNKDFKNIFRPEEGREVARPRMIFLSE 242
Query: 74 SNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCY 133
N+ ++ T RNSP W IHPV C +V ++I P N+ NTDG DP+S V I C
Sbjct: 243 CQNVSLAGFTVRNSPAWNIHPVLCEHVDALCLSIEGPKNSHNTDGFDPESCGFVRILGCQ 302
Query: 134 IESGDDLVAVKSGWDHYGIA-MARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVD 192
GDD +A+KSG GI RP+++ ++ V +GSE +GGI ++TV
Sbjct: 303 FSVGDDCIAIKSG--KLGIEPELRPATHDVLISHCYMHDGHGAVVLGSEAAGGIKDLTVS 360
Query: 193 QLHVWDAAAGVRIKTDKGRG--GYIENITIRNIKMERVKIPIRISR----GSNDHPDEGW 246
+ G+R+KT +GRG E IT +I+M+ V P ++ + D
Sbjct: 361 KCLFERTDRGLRVKTRRGRGKDAVNEGITFEHIRMDEVLTPFVVNSFYFCDKDGKTDYVQ 420
Query: 247 DPKAL------PKIRGISFVNVVSVNT-TKAPVLAGIIGTQFEEICMKNVSLLGLAPSAK 299
+AL P +F ++ + N A + G+ ++ + ++V + AP A+
Sbjct: 421 SREALPVDDRTPGFGATTFCDIEATNCHAAAAYITGLPESKVTRLTFQDVHVT-FAPDAE 479
Query: 300 WQCQFVSGFTSQVFPL 315
FV V P+
Sbjct: 480 ---PFVPAMACGVEPM 492
>gi|86141409|ref|ZP_01059955.1| hypothetical protein MED217_05307 [Leeuwenhoekiella blandensis
MED217]
gi|85831968|gb|EAQ50423.1| hypothetical protein MED217_05307 [Leeuwenhoekiella blandensis
MED217]
Length = 453
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 130/253 (51%), Gaps = 12/253 (4%)
Query: 65 RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSS 124
R ++ S +IL+ + NSPFW IHP +V+I+ + + A + N DG+DP+ S
Sbjct: 204 RPQFIQFNRSKHILLEGIAIENSPFWVIHPYLSSDVIIREVNVFA--HGHNNDGVDPEMS 261
Query: 125 TNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSG 184
NV IE+C + GDD +AVK+G + + P NI++R S + IGSE+SG
Sbjct: 262 QNVLIENCVFDQGDDAIAVKAGRNQDAWRLNTPVKNIVIRDCS-VKNGHQLLAIGSELSG 320
Query: 185 GIFNVTVDQLHVWDAAA---GVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDH 241
G+ NV + V A + IKT++ RGGY++NI + +IK R+ I +
Sbjct: 321 GVENVYMGNCEVAPNAKLNHLLFIKTNERRGGYVKNIYMEDIKAGRIDKGILGIETDVLY 380
Query: 242 PDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGL-APSAKW 300
P ++ I VN+ ++ ++ I+G EE ++N+SL + A + +
Sbjct: 381 QWRDLVPTYERRLTQIEQVNMTNIKAANVDFVSRILGE--EEAPVQNISLRKVTADTIRT 438
Query: 301 QC---QFVSGFTS 310
+ Q V+GFT+
Sbjct: 439 ESEIHQHVNGFTN 451
>gi|346223719|ref|ZP_08844861.1| glycoside hydrolase family protein [Anaerophaga thermohalophila DSM
12881]
Length = 567
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 150/361 (41%), Gaps = 75/361 (20%)
Query: 1 MDEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMW-------- 52
D++P+I+ + G E R +S IH +L N+ TG NG DG G W
Sbjct: 126 FDKYPLIE---TSFEGLETY--RCMSPIHAHNLENIAFTG-NGVFDGSGDAWRPVKKSKM 179
Query: 53 ----WD--------------LWW-------------------------NRTLKHTRGHLV 69
W +W+ + R +V
Sbjct: 180 TASQWKNLVESGGVLSDDGKIWYPTEKSKAGDGKDNFNVPDLSSKEEYEKVKDFLRPVMV 239
Query: 70 ELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCI 129
+ +L+ TF+NSP W IHP+ NV+I+ +TI P + N DG+D +S NV I
Sbjct: 240 SIKECKGVLLDGPTFQNSPAWNIHPLMSENVIIRNLTIRNPWYSQNGDGLDLESCKNVLI 299
Query: 130 EDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNV 189
+ + GDD + KSG + G P+ N+IV+ + G +GSEMSGG+ NV
Sbjct: 300 YNNSFDVGDDAICFKSGKNEDGRRRGMPTENVIVKN-NIVYHGHGGFVVGSEMSGGVRNV 358
Query: 190 TVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKI-PIR-----------ISRG 237
V + G+R K+ +GRGG +ENI I +I M + PIR + G
Sbjct: 359 HVSKCTFMGTDTGLRFKSTRGRGGVVENIYISDIDMIDIPTEPIRFNLFYEGNAPVLDDG 418
Query: 238 SNDHPDEGW-DPKAL----PKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLL 292
N P W +P+ + P R I N+ + A G+ + + ++N L
Sbjct: 419 GNSVPSGEWSEPQPVTEETPSFRNIFMKNIRAHGFGNAGFFMGLPEMNLQNVHLENALLR 478
Query: 293 G 293
G
Sbjct: 479 G 479
>gi|255531066|ref|YP_003091438.1| glycoside hydrolase family protein [Pedobacter heparinus DSM 2366]
gi|255344050|gb|ACU03376.1| glycoside hydrolase family 28 [Pedobacter heparinus DSM 2366]
Length = 554
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 115/242 (47%), Gaps = 16/242 (6%)
Query: 65 RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSS 124
R +L+ L +L+ +TF+NSP W +HP+ ++ I+ + P A N DG+D +S
Sbjct: 224 RPNLLVLNRCKRVLLEGVTFQNSPAWNLHPLMSEDITIRNVYAKNPWYAQNGDGLDIESC 283
Query: 125 TNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSG 184
NV +E + GDD + +KSG D G A P+ N+++R S G IGSEMSG
Sbjct: 284 KNVLVEGSTFDVGDDGICIKSGRDAEGRKRAMPTENVVIRH-STVYHAHGGFVIGSEMSG 342
Query: 185 GIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVK-------------IP 231
G N+ + G+R KT +GRGG +ENI RNI M+ + P
Sbjct: 343 GAKNIFISDCTFIGTDIGLRFKTTRGRGGVVENIYARNINMKDIPGEAILFDMYYAAVDP 402
Query: 232 IRISRGSNDHPDEGWDP--KALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV 289
+ ++ + P P + P R NVV KA + G+ +I + N+
Sbjct: 403 VPLTGEKRETPKVELLPVTEETPVFRKFYISNVVCDGAAKAVFIRGLPEMSISDIFLDNL 462
Query: 290 SL 291
++
Sbjct: 463 TI 464
>gi|300728050|ref|ZP_07061423.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
gi|299774652|gb|EFI71271.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
Length = 463
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/230 (33%), Positives = 117/230 (50%), Gaps = 9/230 (3%)
Query: 65 RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSS 124
R V N+LI TF SPFW +HP+ +NV+++ + + + + N DG DP+S
Sbjct: 207 RPQFVNTYKCENVLIEGPTFNRSPFWILHPLLSKNVIVRDVNLDS--HGRNNDGCDPESC 264
Query: 125 TNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSG 184
NV IE C +GDD +A+KSG D G PS NII+R +GVGIGSE++G
Sbjct: 265 ENVLIERCRFNTGDDCIAIKSGKDEDGRVWNIPSKNIIIRNCE-MKDGHAGVGIGSEITG 323
Query: 185 GIFNVTVD--QLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
G NV V+ ++ + +RIK++ RGG ++N+ +RN+++ + + +
Sbjct: 324 GCENVWVENCKMDSPNLTRVIRIKSNPERGGEVKNLYVRNVEVGVCDLAVLGIEQKYWYT 383
Query: 243 DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGT-QFEEICMKNVSL 291
G +P F NV S + A + G GT Q E I MKN
Sbjct: 384 PTG---PYMPYFHDFYFENVKSSGSKYALHIDGHEGTAQVENIYMKNCRF 430
>gi|302875124|ref|YP_003843757.1| glycoside hydrolase family protein [Clostridium cellulovorans 743B]
gi|307690250|ref|ZP_07632696.1| glycoside hydrolase family 28 [Clostridium cellulovorans 743B]
gi|302577981|gb|ADL51993.1| glycoside hydrolase family 28 [Clostridium cellulovorans 743B]
Length = 510
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 127/244 (52%), Gaps = 13/244 (5%)
Query: 65 RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSS 124
R ++ S NILI ++ NSPFW I+PV C N+ + + + N N DG+DP+S
Sbjct: 241 RPPFIQPYKSKNILIKDVKIINSPFWEINPVLCENIKVDNIKV--GTNLYNNDGVDPESC 298
Query: 125 TNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSG 184
++ IE+CY +GDD +A+KSG ++ G + P+ N+I+ R + G+ IGSE+SG
Sbjct: 299 KDMIIENCYFLTGDDCIAIKSGRNNEGRNIGVPTENVII-RYNEFKDGHGGITIGSEISG 357
Query: 185 GIFNVTV--DQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
G+ ++ + + +R KT+ RGG +ENI ++N + + KI + ++
Sbjct: 358 GVNDIFAHDNYFDSKELDYPIRFKTNAERGGKLENIYVKNSTVNKSKIAV---IHADFFY 414
Query: 243 DEGWDPKALPKIRGISFVNVV-----SVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPS 297
+EG + P +R I+ N+ S++ A + G E I +++ L G+
Sbjct: 415 EEGTNGDHKPILRNITLENIKTVEGGSIDAKNALYIKGFEHAPIENIVIEDAILNGVNGE 474
Query: 298 AKWQ 301
A Q
Sbjct: 475 AILQ 478
>gi|311748289|ref|ZP_07722074.1| exo-poly-alpha-D-galacturonosidase [Algoriphagus sp. PR1]
gi|126576785|gb|EAZ81033.1| exo-poly-alpha-D-galacturonosidase [Algoriphagus sp. PR1]
Length = 557
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 108/375 (28%), Positives = 154/375 (41%), Gaps = 87/375 (23%)
Query: 2 DEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMW--------W 53
DE+P+++ + G R +S I+ + N+ ITG NGTIDG G+ W
Sbjct: 120 DEYPLVE---TSFEGLNTF--RCLSPINAYRVENIAITG-NGTIDGSGEAWRAVKRSKMT 173
Query: 54 DLWWNRTLK---------------HTRGH---------------------------LVEL 71
D WN + GH +V +
Sbjct: 174 DSQWNELVSSGGIVVGTNWFPSQSFLDGHNASSSFNVPDVTDRKELEKMKDFLRPVMVSI 233
Query: 72 MNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIED 131
S +L+ TF+NSP W IHP+ +V+I+ +T+ P + N DG+D +S NV I +
Sbjct: 234 RESKRVLLDGPTFQNSPAWNIHPLMSEDVIIRNLTVRNPWFSQNGDGLDLESCKNVLIYN 293
Query: 132 CYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTV 191
+ GDD + KSG D G P+ N+IV+ + G +GSEMSGGI NV V
Sbjct: 294 NTFDVGDDAICFKSGKDSDGRERGMPTENVIVKN-NIVYHGHGGFTVGSEMSGGIKNVHV 352
Query: 192 DQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRG----SNDHPDEGWD 247
G+R K+ +GRGG +ENI I I M + IP R S + P D
Sbjct: 353 SNCTFMGTDVGLRFKSTRGRGGVVENIWISKINM--INIPAEAIRFNMFYSGNAPVLEED 410
Query: 248 PKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQCQFVSG 307
A + R V T + P F I MK++ + G SG
Sbjct: 411 QNAEDEARKEELAPV----TEETP--------SFRNIFMKDIQVTG------------SG 446
Query: 308 FTSQVFPLPCPQLQN 322
+ LP +LQN
Sbjct: 447 VAAFFMGLPEMKLQN 461
>gi|333382495|ref|ZP_08474165.1| hypothetical protein HMPREF9455_02331 [Dysgonomonas gadei ATCC
BAA-286]
gi|332828806|gb|EGK01498.1| hypothetical protein HMPREF9455_02331 [Dysgonomonas gadei ATCC
BAA-286]
Length = 545
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 114/251 (45%), Gaps = 17/251 (6%)
Query: 57 WNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNT 116
W R +V + N+L+ + F NSP W IHP+ C NV++ + + P A N
Sbjct: 220 WMEIKDFLRPVMVSFIECKNVLLEGVLFENSPSWNIHPLMCENVILDNVMVRNPGYAQNG 279
Query: 117 DGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGV 176
DG+D +S N I + + GDD + +KSG D G RP+ N+++ G
Sbjct: 280 DGLDLESCKNSIIVNSIFDVGDDAICIKSGKDEDGRRRNRPTENVLIDNCK-VFQGHGGF 338
Query: 177 GIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKM-----ERVKIP 231
+GSEMSG + N+ V G+R K+ +GRGG +ENI IR+I M E
Sbjct: 339 VVGSEMSGSVRNILVSNCQFLGTDVGLRFKSCRGRGGVVENIYIRDINMFDIATESFLFD 398
Query: 232 IRISRGSNDHPDEGWDP-----------KALPKIRGISFVNVVSVNTTKAPVLAGIIGTQ 280
+ S E D + P + I N+VS N +A G+ +
Sbjct: 399 LYYGGKSAVESLEDGDTIPVTSTILAVDETTPAFKNIYVKNLVSRNARRAMFFNGLPEMK 458
Query: 281 FEEICMKNVSL 291
E I +++V++
Sbjct: 459 IENINVEDVTI 469
>gi|224536305|ref|ZP_03676844.1| hypothetical protein BACCELL_01177, partial [Bacteroides
cellulosilyticus DSM 14838]
gi|224522067|gb|EEF91172.1| hypothetical protein BACCELL_01177 [Bacteroides cellulosilyticus
DSM 14838]
Length = 434
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 90/169 (53%), Gaps = 1/169 (0%)
Query: 57 WNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNT 116
W R +V L+ N+ + + F+NSP W +HP+ C NV+I+ + + P A N
Sbjct: 219 WQSVRHFLRPVMVSLIECKNVWLQGVIFQNSPAWNLHPLMCENVLIEEVQVRNPSYAQNG 278
Query: 117 DGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGV 176
DG+D +S N I + + GDD + +KSG D G R N++V + G
Sbjct: 279 DGLDLESCKNALIVNSTFDVGDDGICLKSGKDEDGRRRGRVCENVVVDGCT-VFKGHGGF 337
Query: 177 GIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKM 225
+GSEMSGG+ NV+V G+R K+ +GRGG +ENI IRNI M
Sbjct: 338 VVGSEMSGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGVVENIWIRNIAM 386
>gi|261406667|ref|YP_003242908.1| glycoside hydrolase family protein [Paenibacillus sp. Y412MC10]
gi|261283130|gb|ACX65101.1| glycoside hydrolase family 28 [Paenibacillus sp. Y412MC10]
Length = 523
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 151/351 (43%), Gaps = 67/351 (19%)
Query: 1 MDEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMW-------- 52
+++PI L S GR+ R S + G+ L +V ITG G DG G+ W
Sbjct: 89 FEDYPI---LMSTYEGRQMF--RCQSPLDGEGLEDVAITG-GGIFDGSGEAWRPVKRGKL 142
Query: 53 ----WD-------------LWW--------NRTLK------------------HTRGHLV 69
W+ LWW TL + R +L+
Sbjct: 143 TESQWERLIQSGGVVDDQGLWWPTPAARDGQETLDRIEQTGSEEPQDYEPVRDYLRPNLL 202
Query: 70 ELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCI 129
L N IL+S TF+NS W +HP + I+ +T+ P A N DG+D DS V +
Sbjct: 203 SLRNCKRILLSGPTFQNSAAWCLHPWASEQITIQNITVRNPWYAQNGDGLDIDSCKYVTV 262
Query: 130 EDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNV 189
E+ + GDD + +KSG + G + +PS I +R + G+ +GSEMSGGI +V
Sbjct: 263 ENSSFDVGDDAICLKSGKNEAGRLLGKPSERISIRNCT-VYHGHGGIVVGSEMSGGIKDV 321
Query: 190 TVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERV-------KIPIRISRGSNDHP 242
V G+R K+ +GRGG +ENI I I+M + + GS ++
Sbjct: 322 YVSDCTFIGTDIGIRFKSCRGRGGVVENILIERIRMRDIDGDAISFNLYYEGKAGSGEYQ 381
Query: 243 DEGWDP--KALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 291
+E P + P R I ++V A ++ G+ E + +K ++
Sbjct: 382 EEVMLPVTEETPVFRNIVIQDIVCSGAHTALLINGLPEMPVENLTVKRSAI 432
>gi|160886912|ref|ZP_02067915.1| hypothetical protein BACOVA_04926 [Bacteroides ovatus ATCC 8483]
gi|156107323|gb|EDO09068.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
Length = 518
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 124/257 (48%), Gaps = 9/257 (3%)
Query: 45 IDGQGQMWWDL---WWNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVV 101
+ GQG ++ W R L+ ++ S +L+ +TF+NSP W +HP+ C +++
Sbjct: 208 MSGQGNQQAEITSEEWEEMKSWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCESLI 267
Query: 102 IKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNI 161
+ + + P + N D +D +S NV I +C+ ++GDD + +KSG D G P N+
Sbjct: 268 LNDVKVFNPWYSQNGDALDVESCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENV 327
Query: 162 IVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIR 221
IVR + G IGSEMSGG+ NV V + G+R K+ +GRGG +ENI I
Sbjct: 328 IVRN-NTVLHGHGGFVIGSEMSGGVKNVYVSECSFIGTDVGLRFKSARGRGGVVENIYIN 386
Query: 222 NIKMERVKIPIRISRGSNDHPDEGWDP-----KALPKIRGISFVNVVSVNTTKAPVLAGI 276
NI M + I+ +P + P R I +V +A L G+
Sbjct: 387 NINMIDIPNDALIADLYYAAKSAPGEPIPSVSEETPAFRNIYISDVFCRGAGRAAYLNGL 446
Query: 277 IGTQFEEICMKNVSLLG 293
E I +KN+ + G
Sbjct: 447 PEMPIENISIKNMVVTG 463
>gi|383114359|ref|ZP_09935123.1| hypothetical protein BSGG_1470 [Bacteroides sp. D2]
gi|313693935|gb|EFS30770.1| hypothetical protein BSGG_1470 [Bacteroides sp. D2]
Length = 524
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 124/257 (48%), Gaps = 9/257 (3%)
Query: 45 IDGQGQMWWDL---WWNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVV 101
+ GQG ++ W R L+ ++ S +L+ +TF+NSP W +HP+ C +++
Sbjct: 214 MSGQGNQQAEITSEEWEEMKSWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCESLI 273
Query: 102 IKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNI 161
+ + + P + N D +D +S NV I +C+ ++GDD + +KSG D G P N+
Sbjct: 274 LNDVKVFNPWYSQNGDALDVESCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENV 333
Query: 162 IVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIR 221
IVR + G IGSEMSGG+ NV V + G+R K+ +GRGG +ENI I
Sbjct: 334 IVRN-NTVLHGHGGFVIGSEMSGGVKNVYVSECSFIGTDVGLRFKSARGRGGVVENIYIN 392
Query: 222 NIKMERVKIPIRISRGSNDHPDEGWDP-----KALPKIRGISFVNVVSVNTTKAPVLAGI 276
NI M + I+ +P + P R I +V +A L G+
Sbjct: 393 NINMIDIPNDALIADLYYAAKSAPGEPIPSVSEETPAFRNIYISDVFCRGAGRAAYLNGL 452
Query: 277 IGTQFEEICMKNVSLLG 293
E I +KN+ + G
Sbjct: 453 PEMPIENISIKNMVVTG 469
>gi|237717974|ref|ZP_04548455.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 2_2_4]
gi|229452776|gb|EEO58567.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 2_2_4]
Length = 524
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 124/257 (48%), Gaps = 9/257 (3%)
Query: 45 IDGQGQMWWDL---WWNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVV 101
+ GQG ++ W R L+ ++ S +L+ +TF+NSP W +HP+ C +++
Sbjct: 214 MSGQGNQQAEITSEEWEEMKSWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCESLI 273
Query: 102 IKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNI 161
+ + + P + N D +D +S NV I +C+ ++GDD + +KSG D G P N+
Sbjct: 274 LNDVKVFNPWYSQNGDALDVESCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENV 333
Query: 162 IVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIR 221
IVR + G IGSEMSGG+ NV V + G+R K+ +GRGG +ENI I
Sbjct: 334 IVRN-NTVLHGHGGFVIGSEMSGGVKNVYVSECSFIGTDVGLRFKSARGRGGVVENIYIN 392
Query: 222 NIKMERVKIPIRISRGSNDHPDEGWDP-----KALPKIRGISFVNVVSVNTTKAPVLAGI 276
NI M + I+ +P + P R I +V +A L G+
Sbjct: 393 NINMIDIPNDALIADLYYAAKSAPGEPIPSVSEETPAFRNIYISDVFCRGAGRAAYLNGL 452
Query: 277 IGTQFEEICMKNVSLLG 293
E I +KN+ + G
Sbjct: 453 PEMPIENISIKNMVVTG 469
>gi|423223780|ref|ZP_17210249.1| hypothetical protein HMPREF1062_02435 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392638155|gb|EIY32008.1| hypothetical protein HMPREF1062_02435 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 507
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 90/169 (53%), Gaps = 1/169 (0%)
Query: 57 WNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNT 116
W R +V L+ N+ + + F+NSP W +HP+ C NV+I+ + + P A N
Sbjct: 219 WQSVRHFLRPVMVSLIECKNVWLQGVIFQNSPAWNLHPLMCENVLIEEVQVRNPSYAQNG 278
Query: 117 DGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGV 176
DG+D +S N I + + GDD + +KSG D G R N++V + G
Sbjct: 279 DGLDLESCKNALIVNSTFDVGDDGICLKSGKDEDGRRRGRVCENVVVDGCT-VFKGHGGF 337
Query: 177 GIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKM 225
+GSEMSGG+ NV+V G+R K+ +GRGG +ENI IRNI M
Sbjct: 338 VVGSEMSGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGVVENIWIRNIAM 386
>gi|423288978|ref|ZP_17267829.1| hypothetical protein HMPREF1069_02872 [Bacteroides ovatus
CL02T12C04]
gi|423294865|ref|ZP_17272992.1| hypothetical protein HMPREF1070_01657 [Bacteroides ovatus
CL03T12C18]
gi|392668742|gb|EIY62236.1| hypothetical protein HMPREF1069_02872 [Bacteroides ovatus
CL02T12C04]
gi|392676056|gb|EIY69497.1| hypothetical protein HMPREF1070_01657 [Bacteroides ovatus
CL03T12C18]
Length = 524
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 124/257 (48%), Gaps = 9/257 (3%)
Query: 45 IDGQGQMWWDL---WWNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVV 101
+ GQG ++ W R L+ ++ S +L+ +TF+NSP W +HP+ C +++
Sbjct: 214 MSGQGNQQAEITSEEWEEMKSWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCESLI 273
Query: 102 IKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNI 161
+ + + P + N D +D +S NV I +C+ ++GDD + +KSG D G P N+
Sbjct: 274 LNDVKVFNPWYSQNGDALDVESCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENV 333
Query: 162 IVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIR 221
IVR + G IGSEMSGG+ NV V + G+R K+ +GRGG +ENI I
Sbjct: 334 IVRN-NTVLHGHGGFVIGSEMSGGVKNVYVSECSFIGTDVGLRFKSARGRGGVVENIYIN 392
Query: 222 NIKMERVKIPIRISRGSNDHPDEGWDP-----KALPKIRGISFVNVVSVNTTKAPVLAGI 276
NI M + I+ +P + P R I +V +A L G+
Sbjct: 393 NINMIDIPNDALIADLYYAAKSAPGEPIPSVSEETPAFRNIYISDVFCRGAGRAAYLNGL 452
Query: 277 IGTQFEEICMKNVSLLG 293
E I +KN+ + G
Sbjct: 453 PEMPIENISIKNMVVTG 469
>gi|373954236|ref|ZP_09614196.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
gi|373890836|gb|EHQ26733.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
Length = 545
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 94/171 (54%), Gaps = 11/171 (6%)
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+ R ++V L IL+S TF+NSP W +H + C ++ ++ + + P NA N D ID +
Sbjct: 221 YFRPNMVVLTGCKKILLSGTTFQNSPNWCLHTLLCEDLTLQDVHVRNPWNAQNGDAIDVE 280
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVR-----RVSGTTPTCSGVG 177
S NV +E+ ++GDD + +KSG D G P+ N+++R R G G
Sbjct: 281 SCRNVLVENSTFDAGDDGLCIKSGRDEEGRKRGVPTENVVMRNNIVYRAHG------GFV 334
Query: 178 IGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERV 228
IGSEMSGG N+ V G+R KT +GRGG +ENI I+NI M +
Sbjct: 335 IGSEMSGGARNIFVSDCTFIGTDIGLRFKTARGRGGIVENIYIKNISMRDI 385
>gi|431798423|ref|YP_007225327.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430789188|gb|AGA79317.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 565
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 115/246 (46%), Gaps = 22/246 (8%)
Query: 65 RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSS 124
R +V L+ N +L+ TF+NSP W IHP+ NVVI+ + + P + N DG+D +S
Sbjct: 233 RPVMVSLVKCNKVLLDGPTFQNSPAWNIHPLMSENVVIRNLNVRNPWYSQNGDGLDLESC 292
Query: 125 TNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSG 184
N + + + GDD + KSG + G P+ N+IV+ + G +GSEMSG
Sbjct: 293 KNALVYNNTFDVGDDAICFKSGKNQDGRDRGMPTENVIVKN-NTVYHAHGGFVVGSEMSG 351
Query: 185 GIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISR-----GSN 239
G+ NV V G+R K+ +GRGG +ENI I +I M + IP R G N
Sbjct: 352 GVRNVHVSNCTFIGTDVGLRFKSTRGRGGVVENIHISDIDM--INIPTDAIRFNMFYGGN 409
Query: 240 --------DHPDEGWDP------KALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEIC 285
D DE D + P + I N+ + + A G+ E +
Sbjct: 410 SPVLEEDQDAEDEARDETIVPVTEETPAFKDIYMKNITATGSGTAAFFMGLPEKSLENVR 469
Query: 286 MKNVSL 291
++N L
Sbjct: 470 LENALL 475
>gi|322437527|ref|YP_004219617.1| glycoside hydrolase family protein [Granulicella tundricola
MP5ACTX9]
gi|321165420|gb|ADW71123.1| glycoside hydrolase family 28 [Granulicella tundricola MP5ACTX9]
Length = 467
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 147/306 (48%), Gaps = 25/306 (8%)
Query: 24 HISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKHTRGHLVELMNSNNILISNLT 83
++ LIH + + G G+I+G + L+ R L+E + +++ + +
Sbjct: 136 YLGLIHALDARKIAVLG-PGSIEGNVAVAGRPTKENPLR--RPALIEFLYCDDVHLEGFS 192
Query: 84 FRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAV 143
+ W+IHP C N+V + +T+ + L N DGID DS +V I+ C I SGDD +++
Sbjct: 193 TSYAHMWSIHPTCCDNLVFRNLTVRSTLT--NGDGIDIDSCRHVLIDTCDIASGDDCISL 250
Query: 144 KSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAA-G 202
KSG +ARP+ ++ + + + +GIGSE S GI V ++ V
Sbjct: 251 KSGRGEEAYQLARPTEDVRIVNCTLEGRGFACIGIGSETSAGIRRVLIEGCRVTSVYKFA 310
Query: 203 VRIKTDKGRGGYIENITIRNIKMERVKIP-IRISRGSNDHPDEGWDP--KALPKIRGISF 259
V IK+ GRG +IE++T+R++ ++++ ++IS+ S DE P LP R ISF
Sbjct: 311 VYIKSRVGRGAFIEDLTVRDMSAAKMRMGFLKISQTSAGVQDENPVPGLDGLPLFRNISF 370
Query: 260 VNVVSVNTTKAPVLA------------GIIGTQFEEICMKNVSLLGLAPSAKWQCQFVSG 307
+ ++ APVL G+ F C K + L + A + VSG
Sbjct: 371 LR---IHVDDAPVLVEAKEISADKLLDGLTLDGFTGTCAKGLELANIT-HATLRGIAVSG 426
Query: 308 FTSQVF 313
FT +
Sbjct: 427 FTGPLL 432
>gi|430005219|emb|CCF21020.1| Polygalacturonase-like protein [Rhizobium sp.]
Length = 521
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 127/252 (50%), Gaps = 22/252 (8%)
Query: 28 IHGDHLTNVIITGYNGTIDGQGQM--WWDLWWNRT---LKHTRGHLVELMNSNNILISNL 82
+H +++ G G +DG G WW W T + RG + L++ +++ +
Sbjct: 190 LHAIGARRLVLEG-KGILDGAGNAGDWWG-WAKETRDGARRARG--LHLIDCSDVTLFGF 245
Query: 83 TFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVA 142
T RN+P W IHP C +V ++I AP ++PNTDG +P+ S+ + +E GDD +A
Sbjct: 246 TIRNAPSWIIHPQGCHRLVAACLSIEAPHDSPNTDGFNPEGSSEIRVEGVRFTVGDDCIA 305
Query: 143 VKSGWDH--YGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAA 200
+K+G A R + ++ +R GV IGSEMSGG+ +V V+ +
Sbjct: 306 IKAGKRGPCGEAAHLRETRDVQIRHCL-MERGHGGVVIGSEMSGGVHDVLVEDCEMIGTD 364
Query: 201 AGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPD------EGWDPKAL--- 251
G+R+KT +GRGG + IT+R ++ME V + + PD + P AL
Sbjct: 365 RGLRLKTRRGRGGSVSGITMRRVRMEGVLTAFSANAHYHCDPDGHDEWVQSRQPAALDEG 424
Query: 252 -PKIRGISFVNV 262
P+I GI+ ++
Sbjct: 425 TPEIDGIAVEDI 436
>gi|86141279|ref|ZP_01059825.1| hypothetical protein MED217_04657 [Leeuwenhoekiella blandensis
MED217]
gi|85831838|gb|EAQ50293.1| hypothetical protein MED217_04657 [Leeuwenhoekiella blandensis
MED217]
Length = 483
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 78/251 (31%), Positives = 132/251 (52%), Gaps = 18/251 (7%)
Query: 65 RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSS 124
R +E + N+LI +TF N+PFW IHP+ + V + G+T+ + + PN DG DP+ S
Sbjct: 231 RPLFLETLECENVLIQGVTFTNAPFWVIHPLKSKYVTVDGVTVNS--HGPNNDGCDPEYS 288
Query: 125 TNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSG 184
V I +C +GDD +A+KSG + G + PS NI+V GV +GSE+S
Sbjct: 289 KYVHITNCKFNTGDDCIAIKSGRNGDGRRVNIPSENIVVENCD-MKDGHGGVVMGSEISA 347
Query: 185 GIFNVTVDQ--LHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPI-RISRGSNDH 241
G+ NV V ++ + +RIKT+ RGG++EN+ +++I++ +VK + +I+ +
Sbjct: 348 GVRNVFVRNCTMNSPNLDRAIRIKTNTLRGGFVENVYVKDIEVGQVKEAVLKINTYYGIY 407
Query: 242 PDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAG------IIGTQFEEICMKNVSLLGLA 295
+ + + +P I+ I+ NV N K +L + G F+ + +KN
Sbjct: 408 GKQ--EGEFIPTIQNINLENVTVENGGKYGLLIQGREEKPVTGISFKNVTIKNAD----T 461
Query: 296 PSAKWQCQFVS 306
P C+ +S
Sbjct: 462 PLKVEHCEPIS 472
>gi|334342614|ref|YP_004555218.1| glycoside hydrolase [Sphingobium chlorophenolicum L-1]
gi|334103289|gb|AEG50712.1| glycoside hydrolase family 28 [Sphingobium chlorophenolicum L-1]
Length = 482
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 131/277 (47%), Gaps = 57/277 (20%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQG--QMWWDLW---WNRTLKH-----------TRGHLVE 70
L++ NV +TG GT+DGQ WW W WN T++H R L +
Sbjct: 153 LVYAHGQENVALTGA-GTLDGQAGPDNWWS-WKGPWNGTVEHGWKEGMADQRPARARLFQ 210
Query: 71 LMNSN-------------------------NILISNLTFRNSPFWTIHPVYCRNVVIKGM 105
+ +N +LI + R SPFW +HPV CRNVV++G+
Sbjct: 211 MAEANVSPEKRIFGEGDYLRPAFVQFYACDRVLIEGVKLRRSPFWQVHPVLCRNVVVRGV 270
Query: 106 TILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRR 165
I PN DG DP+S + IE C ++GDD +AV SG + G +A P+ NI++R
Sbjct: 271 DIHG--LGPNNDGCDPESVDMMLIEQCTFDTGDDCIAVNSGRNADGRRLAAPAQNIVIRD 328
Query: 166 VSGTTPTCSGVGIGSEMSGGIFNV-----TVDQLHVWDAAAGVRIKTDKGRGGYIENITI 220
GV +GS++SGG ++ T+D +W A +R K + RGG +E+
Sbjct: 329 CR-MKEGHGGVVVGSQISGGARHIYAERCTMDSPDLWYA---IRFKNNALRGGLLEHFYF 384
Query: 221 RNIKMERVKIPIRISRGSNDHPDEGWDPKALPKIRGI 257
R++ + +V R + + + +EG D P +R I
Sbjct: 385 RDLTVGQVS---RAAITCDFNYEEGADGPFKPVLRDI 418
>gi|372223082|ref|ZP_09501503.1| glycoside hydrolase [Mesoflavibacter zeaxanthinifaciens S86]
Length = 453
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 79/231 (34%), Positives = 118/231 (51%), Gaps = 35/231 (15%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWW---------DLWWNRTLKHT------------- 64
LI+ + TN+ ITG G IDG+G W D +R + H
Sbjct: 138 LIYAKNETNIAITGA-GVIDGEGSKVWSTFKAEEQADKLLSRKMNHEEQPIASRQFGKDS 196
Query: 65 --RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
R HL++ ++ NILI + F +SPFWT H + + I+G++ A + N DGID +
Sbjct: 197 KLRPHLLQFIDCKNILIEGVHFEDSPFWTTHFLRSSEITIRGISFNA--HNKNNDGIDLE 254
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMAR-PSSNIIVR--RVSGTTPTCSGVGIG 179
NV IE+ + DD +A+K+G D G A + PS NI++R R G + IG
Sbjct: 255 YVNNVLIENVDFNNSDDNIAIKAGRDTEGRANSETPSQNIVIRNNRFKG----LHALVIG 310
Query: 180 SEMSGGIFNV-TVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVK 229
SEMS G+ NV VD + GV KT+ RGGYI++I I +++++ +
Sbjct: 311 SEMSAGVKNVFVVDNMASGYLKRGVYFKTNSDRGGYIKSIYIDQLELQKTE 361
>gi|452973315|gb|EME73137.1| glycoside hydrolase [Bacillus sonorensis L12]
Length = 436
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 131/272 (48%), Gaps = 54/272 (19%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQG--QMWWDLWWNR------TLKHTRGHLVELMNSN--- 75
LI+ N+ ITG G +DGQ + WW W R + + R L E+ N
Sbjct: 114 LIYAYEAENIAITG-GGMLDGQADDRHWWP--WKRGTNGQPSQEKDRDALFEMAERNVPV 170
Query: 76 ----------------------NILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNA 113
N+ I +T NSP W IHPV C NV + G+ ++ +
Sbjct: 171 EERRFGTGHYLRPNFIQPYRCKNVFIQGVTVMNSPMWQIHPVLCENVTVDGVKVIG--HG 228
Query: 114 PNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTC 173
PNTDG+DP+S ++ I++C ++GDD +A+KSG + G + PS NI++ +
Sbjct: 229 PNTDGVDPESCKSMIIKNCLFDNGDDCIAIKSGRNADGRRINVPSENIVIEN-NEMKDGH 287
Query: 174 SGVGIGSEMSGGIFNVTVDQ--LHVWDAAAGVRIKTDKGRGGYIENI-----TIRNIKME 226
GV IGSE+SGG+ NV + + + +RIKT+ RGG ++NI ++++K E
Sbjct: 288 GGVTIGSEISGGVKNVFAEGNLMDSPNLDRALRIKTNSVRGGVLKNIYFYHNVVKSLKQE 347
Query: 227 RVKIPIRISRGSNDHPDEGWDPKALPKIRGIS 258
+ I + G D G + P +RGI
Sbjct: 348 VIAIDMEYEEG-----DAG---EFKPVVRGIE 371
>gi|399031152|ref|ZP_10731291.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398070621|gb|EJL61913.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 562
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 117/241 (48%), Gaps = 18/241 (7%)
Query: 65 RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSS 124
R LV + NS ++ F+NSP W IHP+ +++++ +T+ P + N DG+D +S
Sbjct: 233 RPVLVSIQNSKRVMFDGPVFQNSPAWNIHPLMIEDLIVRNVTVRNPWFSQNGDGLDVESC 292
Query: 125 TNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSG 184
NV +E+ + GDD + +KSG D G P NIIV+ + GV +GSEMSG
Sbjct: 293 KNVIVENSSFDVGDDAICIKSGKDKDGRDRGIPCENIIVKN-NIVYHGHGGVTVGSEMSG 351
Query: 185 GIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERV--------------KI 230
G+ N+ V G+R K+++GRGG +ENI I +I M + I
Sbjct: 352 GVKNLHVSNCSFMGTDVGLRFKSNRGRGGVVENIFISDIYMTDIPSQAISFDLYYGGKSI 411
Query: 231 PIRISRGSNDHPDEG--WDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKN 288
++ G N + D K P+ + IS NV +A L G+ E I + N
Sbjct: 412 AETLAEGGNTVSSKKVPVDEKT-PQFKNISIKNVTIAGAQQAVFLQGLPEMNLENIEITN 470
Query: 289 V 289
+
Sbjct: 471 L 471
>gi|395212459|ref|ZP_10399800.1| glycoside hydrolase [Pontibacter sp. BAB1700]
gi|394457168|gb|EJF11353.1| glycoside hydrolase [Pontibacter sp. BAB1700]
Length = 582
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 94/169 (55%), Gaps = 3/169 (1%)
Query: 65 RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSS 124
R +V L+N +L+ TF+NSP W IHP+ C +V I+ +T+ P + N DG+D +S
Sbjct: 252 RPVMVSLINCKKVLLDGPTFQNSPAWNIHPLMCEDVTIRNLTVRNPWYSQNGDGLDLESC 311
Query: 125 TNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSG 184
N I + + GDD + +KSG D +G P+ N+IV+ + G +GSEMS
Sbjct: 312 KNSVIYNNTFDVGDDAICIKSGKDQHGRDRGIPTENVIVKN-NVVYHGHGGFVVGSEMSS 370
Query: 185 GIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIR 233
G+ NV V G+R K+ +GRGG +ENI I NI M + IP +
Sbjct: 371 GVKNVHVSNCTFIGTDIGLRFKSTRGRGGVVENIYISNIDM--INIPTQ 417
>gi|395803621|ref|ZP_10482865.1| glycoside hydrolase [Flavobacterium sp. F52]
gi|395434175|gb|EJG00125.1| glycoside hydrolase [Flavobacterium sp. F52]
Length = 553
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 145/334 (43%), Gaps = 69/334 (20%)
Query: 23 RHISLIHGDHLTNVIITGYNGTIDGQGQMW------------W--------------DLW 56
R IS I+G +L N+ TG NG DG G+ W W D W
Sbjct: 136 RCISPIYGKNLENIAFTG-NGVWDGSGEAWRQVKKSKLTDEQWKKFVASGGVLNEKKDSW 194
Query: 57 W--NRTLKHTRGH------------------------LVELMNSNNILISNLTFRNSPFW 90
+ + LK +G LV + NS ++ F+NSP W
Sbjct: 195 YPSEQYLKGAKGADQNIRHDLKTKEDFEAIHDFLRPVLVSIQNSKRVMFDGPVFQNSPAW 254
Query: 91 TIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHY 150
+HP+ +++++ +T+ P + N DG+D +S NV IE+ + GDD + +KSG D
Sbjct: 255 NLHPLLIEDLIVRNVTVRNPWFSQNGDGLDVESCKNVIIENSSFDVGDDAICIKSGKDKD 314
Query: 151 GIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKG 210
G P NIIV+ + GV +GSEMSGG+ N+ V G+R K+ +G
Sbjct: 315 GRDRGVPCENIIVKN-NIVYHGHGGVTVGSEMSGGVKNLHVSNCTFMGTDVGLRFKSTRG 373
Query: 211 RGGYIENITIRNIKMERV---KIPIRISRGSNDHPD---EGWD---PKAL------PKIR 255
RGG +ENI I ++ M + I + G + EG + KA+ P+ +
Sbjct: 374 RGGVVENIYISDVFMTDIPSQAISFDLYYGGKSIAETLAEGGNTVSTKAIPVNEETPQFK 433
Query: 256 GISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV 289
IS N+ +A L G+ E I + N+
Sbjct: 434 NISIKNITIKGAQQAVFLQGLPEMNLENIEITNL 467
>gi|409199011|ref|ZP_11227674.1| endopolygalacturonase [Marinilabilia salmonicolor JCM 21150]
Length = 568
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 105/367 (28%), Positives = 149/367 (40%), Gaps = 87/367 (23%)
Query: 1 MDEWPII----DPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMW---- 52
DE+P+I + L +Y R IS IH +L N+ ITG NG IDG G W
Sbjct: 127 FDEYPLIKTSFEGLDTY---------RCISPIHAHNLENIAITG-NGVIDGNGDAWRPVK 176
Query: 53 --------WD--------------LWW--------------------NRTL-----KHTR 65
W +W+ NR R
Sbjct: 177 KSKMTPSQWKKLVQSGGVLSDDGKIWYPSEKSKAGDGRDNFNVPDFDNRDAFEEVKDFLR 236
Query: 66 GHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSST 125
+V + IL+ TF+NSP W IHP+ +V I+ +TI P + N DG+D +S
Sbjct: 237 PVMVSIKECKRILLDGPTFQNSPAWNIHPLMSEDVTIRNLTIRNPWYSQNGDGLDLESCK 296
Query: 126 NVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGG 185
NV I + + GDD + KSG + G P+ N+IV+ + G +GSEMSG
Sbjct: 297 NVVIYNNTFDVGDDAICFKSGKNEDGRRRGIPTENVIVKN-NIVYHGHGGFVVGSEMSGD 355
Query: 186 IFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKI-PIR----------- 233
+ NV V G+R K+ +GRGG +ENI I NI M + PIR
Sbjct: 356 VRNVHVSDCTFMGTDVGLRFKSTRGRGGVVENIYISNIDMIDIPTEPIRFNLFYGGNAPV 415
Query: 234 ISRGSNDHPDEGWDP-------KALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICM 286
+ G N P E +P + P R I N+ + A G+ + + +
Sbjct: 416 MDDGDNSAPSE--EPAEAVSVTEETPSFRNIFMKNIRANGFGNAAFFMGLPEMNLQNVHL 473
Query: 287 KNVSLLG 293
+N L G
Sbjct: 474 ENAVLRG 480
>gi|315499125|ref|YP_004087929.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
gi|315417137|gb|ADU13778.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
Length = 512
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/213 (34%), Positives = 113/213 (53%), Gaps = 15/213 (7%)
Query: 24 HISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKHT---RGHLVELMNSNNILIS 80
H L + NV I G G +D Q +D WW R R L+ ++ +++
Sbjct: 176 HAGLFNLLFAQNVQIYG-RGVMDAQAG--FDTWWERPKARFIGWRPRLIFMVECEQVILQ 232
Query: 81 NLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDL 140
+T +NSP WT+HP++ R + + I AP ++PNTDG++P+SST++ I GDD
Sbjct: 233 GMTLKNSPSWTVHPLFSRGLTFVDLRIEAPADSPNTDGLNPESSTDIVISGVDFAVGDDC 292
Query: 141 VAVKSGWDHYGIAMARPSSNIIVR-RVSG--TTPTCSGVGIGSEMSGGIFNVTVDQLHVW 197
+A+KSG I+MAR S R R+S V IGSEM+ G+++++V
Sbjct: 293 IALKSG----KISMARRSVRPTRRVRISNCRMKDGHGAVVIGSEMACGVYDISVQTCLFI 348
Query: 198 DAAAGVRIKTDKGRG--GYIENITIRNIKMERV 228
+ G+R+KT +GRG I + R+I+ME V
Sbjct: 349 NTDRGIRLKTRRGRGREAVIRGLNCRHIRMEGV 381
>gi|329925656|ref|ZP_08280474.1| polygalacturonase (pectinase) [Paenibacillus sp. HGF5]
gi|328939683|gb|EGG36026.1| polygalacturonase (pectinase) [Paenibacillus sp. HGF5]
Length = 523
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 152/351 (43%), Gaps = 67/351 (19%)
Query: 1 MDEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMW-------- 52
+++P+ L S GR+ R S + G+ L +V ITG +G DG G+ W
Sbjct: 89 FEDYPL---LMSTYEGRQMF--RCQSPLDGEGLEDVAITG-SGIFDGSGEAWRPVKQGKL 142
Query: 53 ----WD-------------LWW--------NRTLK------------------HTRGHLV 69
W+ LWW TL + R +L+
Sbjct: 143 TESQWERLIQSGGVVDDQGLWWPTPAARDGQETLDRIEQTGSEEPQDYVPVRDYLRPNLL 202
Query: 70 ELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCI 129
L N IL+S TF+NS W +HP + I+ +T+ P A N DG+D DS V +
Sbjct: 203 SLRNCKRILLSGPTFQNSAAWCLHPWASEQITIQNITVRNPWYAQNGDGLDIDSCKYVTV 262
Query: 130 EDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNV 189
E+ + GDD + +KSG + G + +PS I +R + G+ +GSEMSGGI +V
Sbjct: 263 ENSSFDVGDDAICLKSGKNEAGRLLGKPSERIRIRNCT-VYHGHGGIVVGSEMSGGIKDV 321
Query: 190 TVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERV-------KIPIRISRGSNDHP 242
V G+R K+ +GRGG +ENI I I+M + + GS ++
Sbjct: 322 YVSDCTFIGTDIGIRFKSCRGRGGVVENILIERIRMRDIDGDAISFNLYYEGKAGSGEYQ 381
Query: 243 DEGWDP--KALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 291
+E P + P R I ++V A ++ G+ E + +K ++
Sbjct: 382 EEVMLPVTEETPVFRNIVIQDIVCSGAHTALLINGLPEMPVENLTVKRSAI 432
>gi|372276037|ref|ZP_09512073.1| polygalacturonase [Pantoea sp. SL1_M5]
Length = 430
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 117/228 (51%), Gaps = 23/228 (10%)
Query: 26 SLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWN------RTLKHTRGHL----------- 68
++++ + NV + G +GT+DGQG +WW +W +TR L
Sbjct: 90 AMLNINQCRNVTVCG-SGTLDGQGAVWWHKFWGDDENSGMLADYTRRGLRWVVDYDCRRP 148
Query: 69 --VELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTN 126
+ + S + + + T ++S FW +H Y + V ++ + ++ +TDGID DSS
Sbjct: 149 RNLVVYQSECVTLQDFTSKDSGFWNLHVCYSKQVNLQRLNVMNA-TGTSTDGIDIDSSQL 207
Query: 127 VCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGI 186
V +E C + DD + VKSG +AR + +II+R T SG+ +GSE SGGI
Sbjct: 208 VRVEGCTVSCNDDNICVKSGRGAEAQQLARTARDIIIRDC--TLLKGSGITLGSETSGGI 265
Query: 187 FNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRI 234
NV ++ G RIK+ + RGG+I+NI +R++ ME V P +
Sbjct: 266 ENVIIEHNRFSGTGVGFRIKSARNRGGWIKNIIVRHLIMEDVGYPFML 313
>gi|227537592|ref|ZP_03967641.1| glycoside hydrolase [Sphingobacterium spiritivorum ATCC 33300]
gi|227242594|gb|EEI92609.1| glycoside hydrolase [Sphingobacterium spiritivorum ATCC 33300]
Length = 473
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 101/170 (59%), Gaps = 5/170 (2%)
Query: 62 KHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDP 121
++ R + V+ N NILI ++ NSP W ++PV C NV I+ + +++ + PN DG DP
Sbjct: 216 QYLRPNFVQPYNCKNILIEDIKMINSPMWNLNPVLCENVTIERVKVIS--HGPNNDGCDP 273
Query: 122 DSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSE 181
++ NV I+DCY ++GDD +A+KSG D G + RP+ N I+ GV IGSE
Sbjct: 274 EACKNVLIKDCYFDTGDDCIAIKSGRDEDGRNIGRPAENHIIENCI-MKDGHGGVVIGSE 332
Query: 182 MSGGIFNVTV--DQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVK 229
++GG N+ +++ + +R+KT RGG IEN+ ++++++ K
Sbjct: 333 IAGGARNIYALNNKMDSPNLDRILRLKTSSSRGGIIENVFMKDVEVGTYK 382
>gi|336415491|ref|ZP_08595830.1| hypothetical protein HMPREF1017_02938 [Bacteroides ovatus
3_8_47FAA]
gi|335940370|gb|EGN02237.1| hypothetical protein HMPREF1017_02938 [Bacteroides ovatus
3_8_47FAA]
Length = 524
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 118/242 (48%), Gaps = 6/242 (2%)
Query: 57 WNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNT 116
W R L+ ++ S IL+ +TF+NSP W +HP+ C ++ + + + P + N
Sbjct: 229 WEDMKSWLRPVLLSIVKSKKILLEGVTFKNSPSWCLHPLSCESLTLNDVKVFNPWYSQNG 288
Query: 117 DGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGV 176
D +D +S NV I +C+ ++GDD + +KSG D G P NIIVR + G
Sbjct: 289 DALDVESCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENIIVRN-NTVLHGHGGF 347
Query: 177 GIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRIS- 235
IGSEMSGG+ NV V + G+R K+ +GRGG +ENI I NI M + I+
Sbjct: 348 VIGSEMSGGVKNVYVSECSFIGTDVGLRFKSARGRGGVVENIYINNINMIDIPNDALIAD 407
Query: 236 --RGSNDHPDEGWD--PKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 291
+ P E + P R I +V +A L G+ E I +KN+ +
Sbjct: 408 LYYAAKSAPSEPVPSVSEETPAFRNIYISDVFCRGAGRAAYLNGLPEMPIENISIKNMVV 467
Query: 292 LG 293
G
Sbjct: 468 TG 469
>gi|299148436|ref|ZP_07041498.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
gi|298513197|gb|EFI37084.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
Length = 518
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 118/242 (48%), Gaps = 6/242 (2%)
Query: 57 WNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNT 116
W R L+ ++ S IL+ +TF+NSP W +HP+ C ++ + + + P + N
Sbjct: 223 WEDMKSWLRPVLLSIVKSKKILLEGVTFKNSPSWCLHPLSCESLTLNDVKVFNPWYSQNG 282
Query: 117 DGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGV 176
D +D +S NV I +C+ ++GDD + +KSG D G P NIIVR + G
Sbjct: 283 DALDVESCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENIIVRN-NTVLHGHGGF 341
Query: 177 GIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRIS- 235
IGSEMSGG+ NV V + G+R K+ +GRGG +ENI I NI M + I+
Sbjct: 342 VIGSEMSGGVKNVYVSECSFIGTDVGLRFKSARGRGGVVENIYINNINMIDIPNDALIAD 401
Query: 236 --RGSNDHPDEGWD--PKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 291
+ P E + P R I +V +A L G+ E I +KN+ +
Sbjct: 402 LYYAAKSAPSEPVPSVSEETPAFRNIYISDVFCRGAGRAAYLNGLPEMPIENISIKNMVV 461
Query: 292 LG 293
G
Sbjct: 462 TG 463
>gi|408672530|ref|YP_006872278.1| glycoside hydrolase family 28 [Emticicia oligotrophica DSM 17448]
gi|387854154|gb|AFK02251.1| glycoside hydrolase family 28 [Emticicia oligotrophica DSM 17448]
Length = 789
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 129/264 (48%), Gaps = 37/264 (14%)
Query: 65 RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSS 124
R +++ L NI+I +TF+NSP WT+HP+ C ++ +K + + P A N+D ID +S
Sbjct: 459 RPNMLSLTRCKNIIIEGVTFQNSPAWTMHPLLCEHITVKNVNVSNPWYAQNSDAIDLESC 518
Query: 125 TNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSG 184
N +E C +GDD + +KSG D G P+ N +++ G IGSEMSG
Sbjct: 519 RNGVLEGCTFSTGDDGITIKSGRDEQGRKRGVPTENFVIKDCI-VYHAHGGFVIGSEMSG 577
Query: 185 GIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERV-------------KIP 231
G+ N+ + + G+R KT +GRGG + NI + NI M + K P
Sbjct: 578 GVRNMFISDCTFMGSDVGLRFKTARGRGGVVNNIYVNNINMTDIPGEAVLFDMYYAAKDP 637
Query: 232 IRISRGSNDHPDEGWDP--KALPK-------------------IRGISFVNVVSVNTTKA 270
+R N+ P +P + P+ IRG+ + + ++N A
Sbjct: 638 VRADGKENELPVIKAEPLGEGTPQFKDFYIQNIVCKGAETAILIRGLPEMTIKNINIENA 697
Query: 271 PVLA--GIIGTQFEEICMKNVSLL 292
+ A G++ + E++ +KN++LL
Sbjct: 698 MIEANKGLVCVEAEDVSLKNITLL 721
>gi|375148498|ref|YP_005010939.1| glycoside hydrolase family protein [Niastella koreensis GR20-10]
gi|361062544|gb|AEW01536.1| glycoside hydrolase family 28 [Niastella koreensis GR20-10]
Length = 547
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 144/354 (40%), Gaps = 72/354 (20%)
Query: 23 RHISLIHGDHLTNVIITGYNGTIDGQGQMW------------WDLW-------------- 56
R+ S + + TN+ ITG+ G IDG G+ W W W
Sbjct: 123 RNQSPVSATNATNIAITGF-GVIDGGGEAWRQVRKEKLTESQWKEWVAGGGVVSEDGKSW 181
Query: 57 -----WNRTLK---------------------HTRGHLVELMNSNNILISNLTFRNSPFW 90
W + K R +L+ L +L+ +TF+NS W
Sbjct: 182 YPSEQWLKAAKMKNPGEFTPDKTPEFYKSIKDFLRPNLIVLTKCKKVLLEGVTFQNSAAW 241
Query: 91 TIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHY 150
+HP+ ++ ++ +T+ P A N DGID +S V IE+ + GDD + +KSG D
Sbjct: 242 CLHPLMSEDLTVRNVTVKNPWFAQNGDGIDVESCNRVLIENSSFDVGDDGLCMKSGRDEA 301
Query: 151 GIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKG 210
G P+ N+I+R G IGSEMSGG N+ V+ G+R KT +G
Sbjct: 302 GRKRGMPTENVIIRDCK-VYHAHGGFVIGSEMSGGARNIWVNNCTFIGTDIGLRFKTTRG 360
Query: 211 RGGYIENITIRNIKM-----ERVKI--------PIRISRGSNDHPDEGWDP--KALPKIR 255
RGG +ENI +I+M E + P+ ++ + P P + P+ R
Sbjct: 361 RGGIVENIYCNDIQMIDIPGEAILFDMYYMSVDPVALAGEKRELPKVEKLPVDEGTPQFR 420
Query: 256 GISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQCQFVSGFT 309
NVV K L GI +++ ++N L CQ SG T
Sbjct: 421 NFVVKNVVCNGAAKGIFLRGIPEMHVKDVLLENCI---LQARKGIDCQEASGIT 471
>gi|322434842|ref|YP_004217054.1| glycoside hydrolase family protein [Granulicella tundricola
MP5ACTX9]
gi|321162569|gb|ADW68274.1| glycoside hydrolase family 28 [Granulicella tundricola MP5ACTX9]
Length = 478
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 116/218 (53%), Gaps = 19/218 (8%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWWN-------RTLK------HTRGHLVELMNSNNILISN 81
+ +ITG GTIDG G+++WD +W R L+ R LV++ NS++I I
Sbjct: 123 DAVITG-EGTIDGDGKIYWDSYWTLRKGYEPRGLRWASDYDARRPRLVQVFNSSHIKIGG 181
Query: 82 -LTFRNSPFWTIHPVYCRNVVIKGMTIL--APLNAPNTDGIDPDSSTNVCIEDCYIESGD 138
L R S FWT+H Y +V G+TI P+TDGID DSS ++ + I D
Sbjct: 182 GLLLRRSGFWTLHICYSTDVTADGLTIRNNEGGRGPSTDGIDIDSSKHIVVAHADIAVND 241
Query: 139 DLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVW- 197
D + +K+G D G+ + RP+ ++++R S +GV GSE SGG N+ L V+
Sbjct: 242 DALCLKAGRDSDGLRVNRPTEDVVLRD-STIRDGAAGVTFGSETSGGFRNIEAYNLKVFG 300
Query: 198 DAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRIS 235
G+ K+ RGG+ EN+ I ++ + + + ++++
Sbjct: 301 HVPVGILFKSAHTRGGFAENVRIHDLTLTDIPVVLKVT 338
>gi|300770984|ref|ZP_07080861.1| glycoside hydrolase [Sphingobacterium spiritivorum ATCC 33861]
gi|300762257|gb|EFK59076.1| glycoside hydrolase [Sphingobacterium spiritivorum ATCC 33861]
Length = 473
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 101/170 (59%), Gaps = 5/170 (2%)
Query: 62 KHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDP 121
++ R + V+ N NILI ++ NSP W ++PV C NV I+ + +++ + PN DG DP
Sbjct: 216 QYLRPNFVQPYNCKNILIEDIRMINSPMWNLNPVLCENVTIERVKVIS--HGPNNDGCDP 273
Query: 122 DSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSE 181
++ NV I+DCY ++GDD +A+KSG D G + RP+ N I+ GV IGSE
Sbjct: 274 EACKNVLIKDCYFDTGDDCIAIKSGRDEDGRNIGRPAENHIIENCI-MKDGHGGVVIGSE 332
Query: 182 MSGGIFNVTV--DQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVK 229
++GG N+ +++ + +R+KT RGG IEN+ ++++++ K
Sbjct: 333 IAGGARNIYALNNKMDSPNLDRILRLKTSSSRGGIIENVFMKDVEVGTYK 382
>gi|224538432|ref|ZP_03678971.1| hypothetical protein BACCELL_03326 [Bacteroides cellulosilyticus
DSM 14838]
gi|224519937|gb|EEF89042.1| hypothetical protein BACCELL_03326 [Bacteroides cellulosilyticus
DSM 14838]
Length = 435
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/245 (33%), Positives = 117/245 (47%), Gaps = 25/245 (10%)
Query: 65 RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSS 124
R + L NIL+ T +PFW IHP+ NV I+ + + + + N DG DP+S
Sbjct: 182 RPQFINLYKCKNILLEGFTINRAPFWLIHPLLSENVTIRKVKMQS--HGYNNDGCDPESC 239
Query: 125 TNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSG 184
NV IE C ++GDD +A+KSG D G PS NIIVR +GV IGSE++G
Sbjct: 240 NNVLIEYCDFDTGDDCIAIKSGRDEDGRFWNIPSENIIVRNCR-MKDGHAGVAIGSEVTG 298
Query: 185 GIFNVTVDQLHVWDAAAG--VRIKTDKGRGGYIENITIRNIKMERVKIPI--------RI 234
G NV V+ + +RIK++ RGG +EN+ +RNI + K I R+
Sbjct: 299 GCRNVWVENCRMDSPELDRIIRIKSNAIRGGEVENLFVRNIFVGECKESILGIEMKYWRV 358
Query: 235 SRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIG-TQFEEICMKNVSLLG 293
+G LP I N++S + L G TQ ++I +K+ G
Sbjct: 359 EKGP-----------YLPYFHNIYLENIISKKSQYVLHLDGFEDKTQIQDIFIKDCVFDG 407
Query: 294 LAPSA 298
+ S
Sbjct: 408 VGEST 412
>gi|383115308|ref|ZP_09936066.1| hypothetical protein BSGG_2810 [Bacteroides sp. D2]
gi|313695275|gb|EFS32110.1| hypothetical protein BSGG_2810 [Bacteroides sp. D2]
Length = 496
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 112/215 (52%), Gaps = 27/215 (12%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWW---------------NRTLKHTRGHLVELMNSNNILI 79
NV I+G G ID +G+ +WD +W + K RG LVE S ++ +
Sbjct: 154 NVAISG-EGMIDCRGKKFWDQYWSMRREYEKKGLRWAVDYDCKRVRGILVE--RSTDVTL 210
Query: 80 SNLTFRNSPFWTIHPVYCRNVVIKGMTILAPL--NAPNTDGIDPDSSTNVCIEDCYIESG 137
+ T + FW +Y I G+TI + P+TDG+D DSSTN+ IE+C I+
Sbjct: 211 KDFTLMRTGFWACQILYSDYCSINGLTINNNIGGRGPSTDGVDIDSSTNILIENCMIDCN 270
Query: 138 DDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGI---GSEMSGGIFNVTVDQL 194
DD + +KSG D G+ + RP+ N+++R + T G G+ GSE SGGI N+ L
Sbjct: 271 DDNICLKSGRDTDGLRVNRPTENVVIRNCT----TRKGAGLITCGSETSGGIRNILGHDL 326
Query: 195 HVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVK 229
+ +R+K+ RGG IENI I +K + V+
Sbjct: 327 TAQGTWSVLRLKSAMNRGGIIENIYITRVKADSVR 361
>gi|336429336|ref|ZP_08609303.1| hypothetical protein HMPREF0994_05309 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336002947|gb|EGN33044.1| hypothetical protein HMPREF0994_05309 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 521
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/237 (33%), Positives = 117/237 (49%), Gaps = 11/237 (4%)
Query: 24 HISLIHGDHLTNVIITGYNGTIDGQGQM--WWDLWWNRTLKHTRGHLVELMNSNNILISN 81
+ +L G NV + G G I G M WW NR R ++ L + +I +
Sbjct: 180 YAALFTGCGAENVNLYG-KGEILGGASMEDWWS-EENRQSSPHRPRMLFLTHCKHIRVQG 237
Query: 82 LTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLV 141
L F P W IHP +C ++ I + I+ P ++PNTDGI+P+S +V I C+ GDD +
Sbjct: 238 LRFSMCPSWCIHPCFCSDLGIYDVEIINPEDSPNTDGINPESCEHVEIAGCHFSLGDDCI 297
Query: 142 AVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAA 201
A+KSG P S+I +R+ GV IGSE+S G+ +VTV +
Sbjct: 298 AIKSGKGRRAQENPVPGSHIQIRQCFMENGH-GGVTIGSEISSGVHHVTVRDCCFRNTDR 356
Query: 202 GVRIKTDKGRGG--YIENITIRNIKMERVKIPIRISRGSNDHPDEGWD----PKALP 252
G+RIKT +GRG ++ + NI ME+V P ++ PD D +ALP
Sbjct: 357 GLRIKTRRGRGKSCVVDAVLFENIHMEQVDTPFVLNCFYFCEPDGRSDYVQTKEALP 413
>gi|420246079|ref|ZP_14749578.1| endopolygalacturonase, partial [Rhizobium sp. CF080]
gi|398043755|gb|EJL36633.1| endopolygalacturonase, partial [Rhizobium sp. CF080]
Length = 441
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/242 (33%), Positives = 121/242 (50%), Gaps = 24/242 (9%)
Query: 52 WWDLWWNRTLKHTR-GHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAP 110
WW W T + R V L ++ +S LT RNSP WT+HPV C+ ++ +TI
Sbjct: 207 WWS-WPKETRQGARRARTVFLSACEDVTLSGLTIRNSPSWTVHPVLCKGLIAADLTIEND 265
Query: 111 LNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPS-----SNIIVRR 165
++PNTDG +P+SS+++ + +I GDD +A+K+G RP+ N ++ R
Sbjct: 266 PDSPNTDGFNPESSSDIRLVGLHISVGDDCIALKAGKRSPLGGPDRPTEHVRIENCLMER 325
Query: 166 VSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKM 225
G V IGSEMS GI ++ + H G+RIKT +GRGG + +I + + M
Sbjct: 326 GHG------AVVIGSEMSAGISDIAIRNCHFKGTDRGLRIKTRRGRGGLVADIRLSDSLM 379
Query: 226 ERVKIPIRISR--------GSNDHPDEGWDPKAL--PKIRGISFVNV-VSVNTTKAPVLA 274
E V P+ ++ SN P ++ P IR I+ NV VS T A V
Sbjct: 380 EDVATPVAVNSFYFCDADGQSNYVQSRSPLPVSVETPSIRSITVENVTVSGARTAAAVFY 439
Query: 275 GI 276
G+
Sbjct: 440 GL 441
>gi|408501581|ref|YP_006865500.1| pectinesterase [Bifidobacterium asteroides PRL2011]
gi|408466405|gb|AFU71934.1| pectinesterase [Bifidobacterium asteroides PRL2011]
Length = 1519
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 106/208 (50%), Gaps = 13/208 (6%)
Query: 66 GHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSST 125
G L+ + N + + + RN WT+ PVY +++ G+ ++ ++ N DG DP+SS+
Sbjct: 294 GSLISMKNVGGVYLDGIHIRNGMMWTVVPVYSKDITAYGLQLVTSVH--NGDGFDPNSSS 351
Query: 126 NVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGG 185
NV I +GDD A+KSG D GIA+ARPS NI R + GV IGSEMSGG
Sbjct: 352 NVWILGTSFSTGDDCSAIKSGKDAEGIAIARPSENIYFRGDVFNS-GHGGVTIGSEMSGG 410
Query: 186 IFNVTVD-------QLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGS 238
+ NV V+ L G+R+K RGGY+ NI +R+ + ++ + R S
Sbjct: 411 VRNVFVEDSTIVPVDLTSGAVNPGIRVKVSPKRGGYVRNIQVRDSVINKISVITNYDRTS 470
Query: 239 NDHPDEGWDPKALPKIRGISFVNVVSVN 266
D D LP+ F ++ + N
Sbjct: 471 VDDLDS---QTPLPQTENFKFSHITAPN 495
>gi|329956871|ref|ZP_08297439.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328523628|gb|EGF50720.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 522
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 104/210 (49%), Gaps = 24/210 (11%)
Query: 43 GTIDGQGQMWW---------------------DLWWNRTLKHTRGHLVELMNSNNILISN 81
G +D G++W+ D W + R L+ ++ S +L+
Sbjct: 192 GVVDESGKVWYPNEGALKASILTGSKEKREISDSEWEGMKRWLRPVLLSIVKSKRVLLEG 251
Query: 82 LTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLV 141
+TFRNSP W +HP+ C ++ + G+ + P + N D +D +S NV + + ++GDD +
Sbjct: 252 VTFRNSPSWCLHPLSCEDLTLNGVKVFNPWYSQNGDALDVESCKNVVVTNSLFDAGDDAI 311
Query: 142 AVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAA 201
+KSG + G P N++V+ + G +GSEMSGG+ NV V
Sbjct: 312 CIKSGKNADGRRRGEPCENVLVKN-NTVLHGHGGFVVGSEMSGGVRNVYVADCTFIGTDV 370
Query: 202 GVRIKTDKGRGGYIENITIRNIKMERVKIP 231
G+R K+ +GRGG +EN+ + NI M + IP
Sbjct: 371 GLRFKSTRGRGGVVENVYVDNINM--INIP 398
>gi|255034418|ref|YP_003085039.1| glycoside hydrolase [Dyadobacter fermentans DSM 18053]
gi|254947174|gb|ACT91874.1| glycoside hydrolase family 28 [Dyadobacter fermentans DSM 18053]
Length = 528
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/158 (38%), Positives = 88/158 (55%), Gaps = 2/158 (1%)
Query: 68 LVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNV 127
+ +N + I +T N+PFW + PVYC NV+I+G+T+ + + P DGID +SS NV
Sbjct: 223 FISPINCKKVYIEGITLHNTPFWNVVPVYCDNVIIRGITVQS-VGIPRGDGIDIESSRNV 281
Query: 128 CIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIF 187
IE C + SGDD +K+G GI + +P+ N+++R G+ GSE +G I
Sbjct: 282 LIEYCTLSSGDDCFTIKAGRGEDGIRVNKPTENVVIRHCLARE-GHGGITCGSETAGMIR 340
Query: 188 NVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKM 225
NV V D G+R KT + R G ENI NI+M
Sbjct: 341 NVYVRDCVFDDTDTGLRFKTRRSRAGGGENIVYENIRM 378
>gi|293370401|ref|ZP_06616955.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|292634549|gb|EFF53084.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
Length = 525
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 118/242 (48%), Gaps = 6/242 (2%)
Query: 57 WNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNT 116
W R L+ ++ S IL+ +TF+NSP W +HP+ C ++++ + + P + N
Sbjct: 230 WEDMKSWLRPVLLSIVKSKKILLEGVTFKNSPSWCLHPLSCESLILNDVKVFNPWYSQNG 289
Query: 117 DGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGV 176
D +D +S NV I +C+ ++GDD + +KSG D G P N+IVR + G
Sbjct: 290 DALDVESCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENVIVRN-NTVLHGHGGF 348
Query: 177 GIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISR 236
IGSEMSGG+ NV V + G+R K+ +GRGG +ENI I NI M + I+
Sbjct: 349 VIGSEMSGGVKNVYVSECSFIGTDVGLRFKSARGRGGVVENIYINNINMIDIPNDALIAD 408
Query: 237 GSNDHPDEGWDP-----KALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 291
+P + P R I +V +A L G+ E I +KN+ +
Sbjct: 409 LYYAVKSAPGEPVPSVSEETPAFRNIYISDVFCRGAGRAAYLNGLPEMPIENISIKNMVV 468
Query: 292 LG 293
G
Sbjct: 469 TG 470
>gi|347537471|ref|YP_004844896.1| glycoside hydrolase family protein [Flavobacterium branchiophilum
FL-15]
gi|345530629|emb|CCB70659.1| Glycoside hydrolase precursor, family 28 [Flavobacterium
branchiophilum FL-15]
Length = 475
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 97/169 (57%), Gaps = 5/169 (2%)
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+ R + +E N+ + + N+PFW IHP+ +V++ G+ I + + PN DG DP+
Sbjct: 215 YLRPNFIEFFECKNVHLKDFKIVNAPFWIIHPIKSNHVIVDGIHIES--HGPNNDGCDPE 272
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S NV I +C ++GDD +A+K+G D G +A S NI+++ GV IGSE+
Sbjct: 273 YSKNVIIRNCTFDTGDDCIAIKAGRDSDGRRVAIKSENILIQNCK-MFDGHGGVTIGSEI 331
Query: 183 SGGIFNVTVDQ--LHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVK 229
S G+ NV V+ + + +RIK++ RGG IENI +RNI + VK
Sbjct: 332 SAGVSNVFVENCIMDSPELDRAIRIKSNTRRGGIIENIYVRNITVGEVK 380
>gi|160880699|ref|YP_001559667.1| glycoside hydrolase family protein [Clostridium phytofermentans
ISDg]
gi|160429365|gb|ABX42928.1| glycoside hydrolase family 28 [Clostridium phytofermentans ISDg]
Length = 474
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 151/353 (42%), Gaps = 71/353 (20%)
Query: 2 DEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDL------ 55
+E+PII L +Y G+ RL R +S IH N+ ITG G IDG G W L
Sbjct: 85 EEYPII--LTNY-EGQPRL--RAVSPIHAFDEENIAITG-EGVIDGNGHEWRPLKEFKVT 138
Query: 56 --WWNRTLKHT---------------------------------------------RGHL 68
W LK + R +
Sbjct: 139 KKQWQARLKKSPYVIDTKEGGIWYPSKTSYEGCLEGEVSVEDPDALKKAAPNYDLYRPVM 198
Query: 69 VELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVC 128
L+ N ILI +T +NSP W +HP+ C N+ ++ I A N DG+D +S V
Sbjct: 199 TNLVRCNKILIEGVTLQNSPAWNLHPLLCTNLTLRNAFIRNANFAQNGDGLDLESCRFVD 258
Query: 129 IEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFN 188
I + GDD + +KSG + G + P+ ++ +R G IGSEMS G+ +
Sbjct: 259 IYGVKFDVGDDAICIKSGKNAIGRKITVPTEHVRIRDCV-VYHGHGGFVIGSEMSRGVRD 317
Query: 189 VTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVK----------IPIRISRGS 238
V ++ G+R K+ GRGG +E+ITIRNI+M ++ R+ +
Sbjct: 318 VVIENCLFLGTDTGIRFKSAIGRGGVVEDITIRNIQMTDIEEDAIIFTMGYTLFRLDHQA 377
Query: 239 NDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 291
+D PD + +P+ + I+ +V + +A + G+ +I ++NV +
Sbjct: 378 SDEPDT-ISKEDIPEFKNITIRDVNCLRAGQAIKIDGLEQMPIHDIILENVMI 429
>gi|345013580|ref|YP_004815934.1| glycoside hydrolase [Streptomyces violaceusniger Tu 4113]
gi|344039929|gb|AEM85654.1| glycoside hydrolase family 28 [Streptomyces violaceusniger Tu 4113]
Length = 484
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 120/241 (49%), Gaps = 44/241 (18%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMW-WDLWWN------------RTLKHT--------- 64
I+ +V +TG GT+DGQ ++ W+ W+ R + T
Sbjct: 158 FIYAYGARDVAVTG-PGTLDGQARLGPWESWYRDSGPQGADQKLLREMGSTGAPVARRVF 216
Query: 65 ------RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDG 118
R +V+ N+L+S+LT + P WT+HPV NV ++G+T+ + L NTDG
Sbjct: 217 GDGHCLRPKMVQFYRCRNVLVSDLTIVDPPMWTVHPVLSSNVTVRGVTVDSTLY--NTDG 274
Query: 119 IDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVR--RVSGTTPTCSGV 176
DP+ ++V I C + DD VAVKSG D G + PS NI+VR + SG G+
Sbjct: 275 CDPECCSDVLITGCRFNTNDDCVAVKSGRDEDGHRVGVPSRNIVVRDCQFSG---RWGGM 331
Query: 177 GIGSEMSGGIFNVTVDQLHV--------WDAAAGVRIKTDKGRGGYIENITIRNIKMERV 228
+GSEMSGG+ ++ + + + + +K +K RGG+I+ + IRN + V
Sbjct: 332 TVGSEMSGGVRDIFAENCEINPPDFPGRYPVKHALYVKANKKRGGFIDGVHIRNFTGQDV 391
Query: 229 K 229
+
Sbjct: 392 E 392
>gi|357487387|ref|XP_003613981.1| Polygalacturonase [Medicago truncatula]
gi|355515316|gb|AES96939.1| Polygalacturonase [Medicago truncatula]
Length = 400
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/227 (34%), Positives = 114/227 (50%), Gaps = 27/227 (11%)
Query: 43 GTIDGQGQMWWDLWWNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVI 102
GTIDGQG WW + + R + + ++ ISNL NSP I C+N I
Sbjct: 131 GTIDGQGAPWWKKYHDG--DSNRPTAFQFIGCESLTISNLNHINSPRNHISIDSCKNASI 188
Query: 103 KGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIA--MARPSSN 160
+ I+AP N+PNTDGID SS+N+ I + I++GDD +A+ SG + I + P
Sbjct: 189 SNLQIIAPENSPNTDGIDIASSSNIIINNLSIKTGDDCIAINSGSNFINITGVLCGPG-- 246
Query: 161 IIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDA-----AAGVRIKTDKGRGGYI 215
G+ +GS GG + TV+++HV D G RIKT KG GY
Sbjct: 247 -------------HGISVGSLGKGGEY-ATVEEVHVKDCTFTGTTNGARIKTWKGGSGYA 292
Query: 216 ENITIRNIKMERVKIPIRISRGSNDHPDEGWDPKALPKIRGISFVNV 262
IT NIK+ VK PI I++ N H + + K+ ++F+N+
Sbjct: 293 RKITYENIKLVEVKNPIIINQNYNPHIYD--SSSEVVKVSDVTFLNI 337
>gi|372281193|ref|ZP_09517229.1| polygalacturonase-like protein [Oceanicola sp. S124]
Length = 861
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 103/343 (30%), Positives = 148/343 (43%), Gaps = 51/343 (14%)
Query: 4 WPIIDPLPSYGRG-------RERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQM--WWD 54
WPI+ P GR E ++ I D LT ITG G +D G WW
Sbjct: 151 WPILPPRDDAGRVIGTWEGLPEAAFAAPLTAIDCDGLT---ITGL-GILDAGGDRGDWWS 206
Query: 55 LWWNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAP 114
R + L + + +S +T RNSP WT+HP + G+ I P ++P
Sbjct: 207 WPKETRAGARRPRALFLAHGQGVQLSGITVRNSPSWTVHPYRIDGLTCAGLKIQNPPDSP 266
Query: 115 NTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTC- 173
NTDG++P+S T+V + + GDD +AVKSG G RR+ C
Sbjct: 267 NTDGLNPESCTDVTLAGIHFSVGDDCIAVKSGKRGTGALKGLAGHLAPTRRLH--VHHCL 324
Query: 174 -----SGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERV 228
G+ +GSEMSG I +VTV G+RIKT +GRGG + + ++ M+ V
Sbjct: 325 MERGHGGMVLGSEMSGDITDVTVTACEFIGTDRGLRIKTRRGRGGEVARVHFSDVLMQGV 384
Query: 229 KIPIRISRGSNDHPDEGWDP-----------KALPKIRGISFVNVVSVNTTKAPVLAGII 277
P+ I+ PD G P + PKI I+F +V++ T PV A
Sbjct: 385 GTPLAINAFYYCDPD-GRSPEVQSRSPAPVDETTPKIHDITFSDVIA---TDVPVCA--- 437
Query: 278 GTQFEEICMKNVSLLGLAPSAKWQCQFVSGFTSQVFPLPCPQL 320
V++LGL P A + F + + P PQ+
Sbjct: 438 -----------VAVLGL-PEAPVTGVRLKNFRASLDPSAPPQV 468
>gi|423294934|ref|ZP_17273061.1| hypothetical protein HMPREF1070_01726 [Bacteroides ovatus
CL03T12C18]
gi|392674514|gb|EIY67960.1| hypothetical protein HMPREF1070_01726 [Bacteroides ovatus
CL03T12C18]
Length = 487
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/244 (31%), Positives = 121/244 (49%), Gaps = 41/244 (16%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWW---------------NRTLKHTRGHLVELMNSNNILI 79
N +TG G ID +G+++WD +W + K RG LV NS +I +
Sbjct: 150 NAALTG-EGFIDCRGKVFWDKYWAMREEYEKKNLRWIVDYDCKRVRGVLVS--NSKHITL 206
Query: 80 SNLTFRNSPFWTIHPVYCRNVVIKGMTILAPL--NAPNTDGIDPDSSTNVCIEDCYIESG 137
+ T + FW +Y + + G+TI + + P+TDGID DSSTN+ +E+C ++
Sbjct: 207 KDFTLVRTGFWACQILYSDHCSVSGLTINNNVGGHGPSTDGIDIDSSTNILVENCDVDCN 266
Query: 138 DDLVAVKSGWDHYGIAMARPSSNIIVR----RVSGTTPTCSGVGIGSEMSGGIFNVTVDQ 193
DD + +K+G D G+ + RP+ N++VR R TC GSE SG I NV
Sbjct: 267 DDNICIKAGRDADGLRVNRPTENVVVRNCIARKGAGLLTC-----GSETSGSIRNVLAHD 321
Query: 194 LHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDPK---- 249
L + +R+K+ RGG +ENI + ++ + V + + D W+PK
Sbjct: 322 LIAYGTGTTLRLKSSMNRGGTVENIYMTRVEADSVTHILSV--------DLNWNPKYSYS 373
Query: 250 ALPK 253
ALPK
Sbjct: 374 ALPK 377
>gi|160886983|ref|ZP_02067986.1| hypothetical protein BACOVA_04997 [Bacteroides ovatus ATCC 8483]
gi|423288919|ref|ZP_17267770.1| hypothetical protein HMPREF1069_02813 [Bacteroides ovatus
CL02T12C04]
gi|156107394|gb|EDO09139.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|392669009|gb|EIY62501.1| hypothetical protein HMPREF1069_02813 [Bacteroides ovatus
CL02T12C04]
Length = 487
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/244 (31%), Positives = 121/244 (49%), Gaps = 41/244 (16%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWW---------------NRTLKHTRGHLVELMNSNNILI 79
N +TG G ID +G+++WD +W + K RG LV NS +I +
Sbjct: 150 NAALTG-EGFIDCRGKVFWDKYWAMREEYEKKNLRWIVDYDCKRVRGVLVS--NSKHITL 206
Query: 80 SNLTFRNSPFWTIHPVYCRNVVIKGMTILAPL--NAPNTDGIDPDSSTNVCIEDCYIESG 137
+ T + FW +Y + + G+TI + + P+TDGID DSSTN+ +E+C ++
Sbjct: 207 KDFTLVRTGFWACQILYSDHCSVSGLTINNNVGGHGPSTDGIDIDSSTNILVENCDVDCN 266
Query: 138 DDLVAVKSGWDHYGIAMARPSSNIIVR----RVSGTTPTCSGVGIGSEMSGGIFNVTVDQ 193
DD + +K+G D G+ + RP+ N++VR R TC GSE SG I NV
Sbjct: 267 DDNICIKAGRDADGLRVNRPTENVVVRNCIARKGAGLLTC-----GSETSGSIRNVLAHD 321
Query: 194 LHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDPK---- 249
L + +R+K+ RGG +ENI + ++ + V + + D W+PK
Sbjct: 322 LIAYGTGTTLRLKSSMNRGGTVENIYMTRVEADSVTHILSV--------DLNWNPKYSYS 373
Query: 250 ALPK 253
ALPK
Sbjct: 374 ALPK 377
>gi|298482124|ref|ZP_07000312.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298271681|gb|EFI13254.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 487
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/244 (31%), Positives = 121/244 (49%), Gaps = 41/244 (16%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWW---------------NRTLKHTRGHLVELMNSNNILI 79
N +TG G ID +G+++WD +W + K RG LV NS +I +
Sbjct: 150 NAALTG-EGFIDCRGKVFWDKYWAMREEYEKKNLRWIVDYDCKRVRGVLVS--NSKHITL 206
Query: 80 SNLTFRNSPFWTIHPVYCRNVVIKGMTILAPL--NAPNTDGIDPDSSTNVCIEDCYIESG 137
+ T + FW +Y + + G+TI + + P+TDGID DSSTN+ +E+C ++
Sbjct: 207 KDFTLVRTGFWACQILYSDHCSVSGLTINNNVGGHGPSTDGIDIDSSTNILVENCDVDCN 266
Query: 138 DDLVAVKSGWDHYGIAMARPSSNIIVR----RVSGTTPTCSGVGIGSEMSGGIFNVTVDQ 193
DD + +K+G D G+ + RP+ N++VR R TC GSE SG I NV
Sbjct: 267 DDNICIKAGRDADGLRVNRPTENVVVRNCIARKGAGLLTC-----GSETSGSIRNVLAHD 321
Query: 194 LHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDPK---- 249
L + +R+K+ RGG +ENI + ++ + V + + D W+PK
Sbjct: 322 LIAYGTGTTLRLKSSMNRGGTVENIYMTRVEADSVTHILSV--------DLNWNPKYSYS 373
Query: 250 ALPK 253
ALPK
Sbjct: 374 ALPK 377
>gi|255691082|ref|ZP_05414757.1| exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii DSM
17565]
gi|260623432|gb|EEX46303.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 487
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/244 (31%), Positives = 121/244 (49%), Gaps = 41/244 (16%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWW---------------NRTLKHTRGHLVELMNSNNILI 79
N +TG G ID +G+++WD +W + K RG LV NS +I +
Sbjct: 150 NAALTG-EGFIDCRGKVFWDKYWAMREEYEKKNLRWIVDYDCKRVRGVLVS--NSKHITL 206
Query: 80 SNLTFRNSPFWTIHPVYCRNVVIKGMTILAPL--NAPNTDGIDPDSSTNVCIEDCYIESG 137
+ T + FW +Y + + G+TI + + P+TDGID DSSTN+ +E+C ++
Sbjct: 207 KDFTLVRTGFWACQILYSDHCSVSGLTINNNVGGHGPSTDGIDIDSSTNILVENCDVDCN 266
Query: 138 DDLVAVKSGWDHYGIAMARPSSNIIVR----RVSGTTPTCSGVGIGSEMSGGIFNVTVDQ 193
DD + +K+G D G+ + RP+ N++VR R TC GSE SG I NV
Sbjct: 267 DDNICIKAGRDADGLRVNRPTENVVVRNCIARKGAGLLTC-----GSETSGSIRNVLAHD 321
Query: 194 LHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDPK---- 249
L + +R+K+ RGG +ENI + ++ + V + + D W+PK
Sbjct: 322 LIAYGTGTTLRLKSSMNRGGTVENIYMTRVEADSVTHILSV--------DLNWNPKYSYS 373
Query: 250 ALPK 253
ALPK
Sbjct: 374 ALPK 377
>gi|388495020|gb|AFK35576.1| unknown [Lotus japonicus]
Length = 172
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 83/142 (58%), Gaps = 1/142 (0%)
Query: 182 MSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDH 241
MSGG+ V + ++++D+ + +RIKT GRGGY+ N+ I N+ + + I IR + +H
Sbjct: 1 MSGGVSEVHAEDIYIFDSRSAIRIKTSPGRGGYVRNVYISNMTLANIDIAIRFTGLYGEH 60
Query: 242 PDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQ 301
PDE +DP ALP I I+ +V+ N +A ++ GI G F IC+ N+S L ++ W
Sbjct: 61 PDEAYDPDALPLIERITIKDVIGENVKRAGLIQGIKGYDFVNICLSNIS-LNVSSKVPWN 119
Query: 302 CQFVSGFTSQVFPLPCPQLQNK 323
C V G++ V P C L+ +
Sbjct: 120 CSDVKGYSDLVSPEVCEPLKER 141
>gi|354581296|ref|ZP_09000200.1| glycoside hydrolase family 28 [Paenibacillus lactis 154]
gi|353201624|gb|EHB67077.1| glycoside hydrolase family 28 [Paenibacillus lactis 154]
Length = 522
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 124/246 (50%), Gaps = 15/246 (6%)
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+ R +L+ L N IL++ TF+NS W +HP + I+ +T+ P A N DG+D D
Sbjct: 195 YLRPNLLSLRNCKRILLNGPTFQNSAAWCLHPWASEQITIQNITVRNPWYAQNGDGLDID 254
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S V +E+ + GDD + +KSG + G + +PS I +R + G+ +GSEM
Sbjct: 255 SCKYVTVENSSFDVGDDAICLKSGKNEAGRLLGKPSERISIRNCT-VYHGHGGIVVGSEM 313
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERV-------KIPIRIS 235
SGGI +V V + G+R K+ +GRGG +ENI I I+M + +
Sbjct: 314 SGGIKDVHVSDCNFIGTDIGIRFKSCRGRGGVVENIFIERIRMREIDGDAISFNLYYEGK 373
Query: 236 RGSNDHPDEGWDP--KALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLG 293
GS ++ E P + P R I ++V A ++ G+ E+ ++NV+++
Sbjct: 374 AGSGEYQAEAMLPVTEETPVFRNIVIQDIVCSGAHTALLINGL-----PEMPVENVTVMR 428
Query: 294 LAPSAK 299
A +++
Sbjct: 429 SAITSR 434
>gi|408369670|ref|ZP_11167450.1| glycoside hydrolase [Galbibacter sp. ck-I2-15]
gi|407744724|gb|EKF56291.1| glycoside hydrolase [Galbibacter sp. ck-I2-15]
Length = 454
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 93/163 (57%), Gaps = 6/163 (3%)
Query: 65 RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSS 124
R ++ S NIL+ +T NSPFW IHP +NV IK +T+ A + N DG+DP+ S
Sbjct: 206 RPQFIQFNRSENILLQGVTITNSPFWVIHPYLSKNVSIKEVTVFA--HGHNNDGVDPEMS 263
Query: 125 TNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSG 184
N+ IE+C + GDD +AVKSG + +A P+ NI+++ + IGSE+SG
Sbjct: 264 QNIIIENCTFDQGDDAIAVKSGRNQDAWRLATPAKNIVIKNCK-IINGHQLMAIGSELSG 322
Query: 185 GIFNVTVDQLHVWDAAA---GVRIKTDKGRGGYIENITIRNIK 224
GI N+ + V A + IKT++ RGG + NI + +I+
Sbjct: 323 GIENIYMSNCQVEQGAKLNHLLFIKTNERRGGIVSNIYMDSIQ 365
>gi|431797010|ref|YP_007223914.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430787775|gb|AGA77904.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 455
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 112/229 (48%), Gaps = 36/229 (15%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKHT---------------------- 64
LI+ N+ ITG G + + W +W++R H
Sbjct: 142 LIYAFDCENIAITG-KGELKAKMNTW-KVWFSRPKAHMESLKRLYNLAATDVPVEERNFV 199
Query: 65 ------RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDG 118
R ++ +L+ + NSPFW IHP ++VVI+ + + A + N DG
Sbjct: 200 NDSSNFRPQFIQFNRCEKVLLEGVKITNSPFWVIHPFMSKDVVIRDVQVFA--HGHNNDG 257
Query: 119 IDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGI 178
+DP+ S N+ IE+C + GDD +AVKSG + + P+ NI++R S + I
Sbjct: 258 VDPEMSQNMLIENCIFDQGDDAIAVKSGRNQDAWRLNMPTKNIVIRN-SLVKNGHQLLAI 316
Query: 179 GSEMSGGIFNVTVDQLHVWDAAA---GVRIKTDKGRGGYIENITIRNIK 224
GSE+SGG+ NV ++ V + A + +KT++ RGGY+ N+ ++NI+
Sbjct: 317 GSELSGGVENVYMENCEVQEGAKLNHLLYVKTNERRGGYVRNVHMKNIQ 365
>gi|423223572|ref|ZP_17210041.1| hypothetical protein HMPREF1062_02227 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392638197|gb|EIY32044.1| hypothetical protein HMPREF1062_02227 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 551
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 95/183 (51%), Gaps = 16/183 (8%)
Query: 57 WNRTLK-------HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILA 109
W +T++ R +V + +L+ + F+NSP W +H R++++ + +
Sbjct: 212 WAKTMEDFESVRDFLRPVMVNFRECDGVLLEGIVFQNSPCWNVHLSLSRDIIVHNIAVRC 271
Query: 110 PLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGT 169
P A N DGID +S TN+ + D + + GDD + +KSG D G P+SNIIV
Sbjct: 272 PWYAKNGDGIDIESCTNLLLTDSWFDVGDDAICIKSGKDEEGRRRGIPASNIIVDNC--- 328
Query: 170 TPTC----SGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKM 225
C G +GSEMSGG+ N+ V G+R K+ +GRGG +ENI I+NI M
Sbjct: 329 --VCYHGHGGFVVGSEMSGGVKNIAVSNCRFSGTDVGLRFKSKRGRGGVVENIYIKNIMM 386
Query: 226 ERV 228
+
Sbjct: 387 NDI 389
>gi|224538252|ref|ZP_03678791.1| hypothetical protein BACCELL_03143 [Bacteroides cellulosilyticus
DSM 14838]
gi|423221595|ref|ZP_17208065.1| hypothetical protein HMPREF1062_00251 [Bacteroides cellulosilyticus
CL02T12C19]
gi|224520112|gb|EEF89217.1| hypothetical protein BACCELL_03143 [Bacteroides cellulosilyticus
DSM 14838]
gi|392645922|gb|EIY39642.1| hypothetical protein HMPREF1062_00251 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 534
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 93/178 (52%), Gaps = 3/178 (1%)
Query: 54 DLWWNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNA 113
D WN R L+ ++ S +L+ +TF+NSP W +HP+ C ++ I + + P +
Sbjct: 226 DEEWNEIRPWLRPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITIHNVKVFNPWYS 285
Query: 114 PNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTC 173
N D +D +S N I + ++GDD + +KSG D G P N+IV+ +
Sbjct: 286 QNGDALDLESCKNALIVNNIFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKN-NTVLHGH 344
Query: 174 SGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIP 231
G +GSEMSGG+ NV V G+R K+ +GRGG +E I I NI M + IP
Sbjct: 345 GGFVVGSEMSGGVKNVYVTDCTFLGTDVGLRFKSTRGRGGVVEGIYIHNINM--IDIP 400
>gi|337746270|ref|YP_004640432.1| hypothetical protein KNP414_02001 [Paenibacillus mucilaginosus
KNP414]
gi|336297459|gb|AEI40562.1| hypothetical protein KNP414_02001 [Paenibacillus mucilaginosus
KNP414]
Length = 475
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 97/321 (30%), Positives = 148/321 (46%), Gaps = 39/321 (12%)
Query: 2 DEWPIIDPLPSYGRGRERLGGRHISLIHGD-----HLTNVIITGYNGTIDGQGQMWWDLW 56
D++P+ + GRE+L + SLI+ L +II G G ID G +
Sbjct: 125 DDYPV---MQYRWEGREQLC--YASLINTKDPAEGRLEQIIIEG-EGKIDANGMALFHKE 178
Query: 57 WNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAP-- 114
K RG V L N + + + ++T R SP W +H +YC V + + I +
Sbjct: 179 MAEK-KGFRGRAVCLRNVDGVYLKDITVRQSPAWCVHLIYCNGVSVNHIEIHTKKDEQGR 237
Query: 115 ------NTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSG 168
N DG++PDS+++V I + I S DD +A+KSG + G + PS NI R+S
Sbjct: 238 RYEHIFNGDGLNPDSTSDVYIFNSMIASQDDCIAIKSGRNEEGRRVGIPSQNI---RISN 294
Query: 169 TT-PTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMER 227
T + GV GSEMSGG+ NV + D + IK +GRG IEN+T+ + +
Sbjct: 295 CTFKSGFGVATGSEMSGGVRNVRISDCRFEDVYSIATIKAPRGRGAVIENVTVEDCTLTN 354
Query: 228 VKIP---IRISRGS------NDHPDEGWDP-----KALPKIRGISFVNVV-SVNTTKAPV 272
+ R RG+ H D D + IR I N+V + A
Sbjct: 355 YSLEHEDCRWFRGAINIDQFYSHADFDADKVEEVDEGTSVIRNIHLKNIVLDTHAGNAVF 414
Query: 273 LAGIIGTQFEEICMKNVSLLG 293
+AG+ + + I ++NV+ LG
Sbjct: 415 MAGLPESPLQNIRLENVNALG 435
>gi|325106411|ref|YP_004276065.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324975259|gb|ADY54243.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 476
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 158/332 (47%), Gaps = 51/332 (15%)
Query: 26 SLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKHT-------------RGHLVELM 72
+LI+ + +I+G G I+ QG+++WD +WN ++ R + +
Sbjct: 135 ALINVLDQEDAMISG-KGLINAQGKVFWDYYWNLRKEYEPKGLRWIIDYDARRPRTILVS 193
Query: 73 NSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPL--NAPNTDGIDPDSSTNVCIE 130
NS N+ I +L + + FWT+ VY V + G+TI + + P+TDG+D DSS+ + ++
Sbjct: 194 NSKNVTIKDLNIQQAGFWTVQVVYSSYVTVDGLTINNNVGGHGPSTDGVDIDSSSWILVQ 253
Query: 131 DCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVR----RVSGTTPTCSGVGIGSEMSGGI 186
+ I+ DD +K+G D G+ + RP +++R R G T +GSE SGGI
Sbjct: 254 NTDIDCNDDNFCIKAGRDADGLRVNRPCEYVVIRDCVARKGGGLLT-----LGSETSGGI 308
Query: 187 FNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRG-----SNDH 241
N+ + + + IK+ RGG++EN+ + N+ M+ V ++++ S
Sbjct: 309 RNIYASNIKGMATSNCLNIKSAVTRGGFVENVLLENVTMDSVGTVLQVNMNWNPAYSYSE 368
Query: 242 PDEGWD------------PKALPKIRGISFVNVVSVN------TTKAPVLAGIIGTQFEE 283
+G+D K PK +GI + +N +A + G+ ++ E
Sbjct: 369 LPKGYDYNSIPKHWKALLQKVEPKEKGIPIFKNIYMNNIHIKGAKRAINVVGLPQSKVEN 428
Query: 284 ICMKNVSLLGLAPSAKWQCQFVSGFTSQVFPL 315
+ +KNVS + A Q ++ + + Q F L
Sbjct: 429 VNLKNVS---IEADAAGQIRYSTNWKLQNFNL 457
>gi|336404047|ref|ZP_08584748.1| hypothetical protein HMPREF0127_02061 [Bacteroides sp. 1_1_30]
gi|295086699|emb|CBK68222.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
gi|335943763|gb|EGN05595.1| hypothetical protein HMPREF0127_02061 [Bacteroides sp. 1_1_30]
Length = 511
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 122/242 (50%), Gaps = 33/242 (13%)
Query: 13 YGRGRERLGGRHI----SLIHGDHLTNVIITGYNGTIDGQGQMWWDLWW----------- 57
Y R R+ G + ++I+ + N ++G GT+D +G+++WD +W
Sbjct: 134 YPEFRSRIAGIEMTWPAAVINIVNEKNAAVSG-EGTLDCRGKVFWDKYWEMRKEYEAKGL 192
Query: 58 ----NRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPL-- 111
+ K RG LVE S++I + T + FW +Y I G+ I L
Sbjct: 193 RWIVDYDCKRVRGILVE--RSSDITLKGFTLMRTGFWGCQVLYSNYCTIDGLVINNNLGG 250
Query: 112 NAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVR----RVS 167
+ P+TDGID DSSTN+ IE+C ++ DD + +KSG D G+ + P+ NI++R R
Sbjct: 251 HGPSTDGIDIDSSTNILIENCDVDCNDDNICIKSGRDADGLRVNLPTENIVIRNCIARKG 310
Query: 168 GTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMER 227
TC GSE SG I N+ L +A +R+K+ RGG IENI + ++K E
Sbjct: 311 AGLITC-----GSETSGSIRNILGYNLQAVGTSAVLRLKSAMNRGGTIENIYMTDVKAEN 365
Query: 228 VK 229
V+
Sbjct: 366 VR 367
>gi|427387085|ref|ZP_18883141.1| hypothetical protein HMPREF9447_04174 [Bacteroides oleiciplenus YIT
12058]
gi|425725690|gb|EKU88559.1| hypothetical protein HMPREF9447_04174 [Bacteroides oleiciplenus YIT
12058]
Length = 534
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 93/178 (52%), Gaps = 3/178 (1%)
Query: 54 DLWWNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNA 113
D WN R L+ ++ S +L+ +TF+NSP W +HP+ C ++ I + + P +
Sbjct: 226 DEEWNEIRPWLRPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITIHNVKVFNPWYS 285
Query: 114 PNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTC 173
N D +D +S N I + ++GDD + +KSG D G P N+IV+ +
Sbjct: 286 QNGDALDLESCKNALIINNIFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKN-NTVLHGH 344
Query: 174 SGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIP 231
G +GSEMSGG+ NV V G+R K+ +GRGG +E I I NI M + IP
Sbjct: 345 GGFVVGSEMSGGVKNVYVTDCTFLGTDVGLRFKSTRGRGGVVEGIYIHNINM--IDIP 400
>gi|189468045|ref|ZP_03016830.1| hypothetical protein BACINT_04439 [Bacteroides intestinalis DSM
17393]
gi|189436309|gb|EDV05294.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 534
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 93/178 (52%), Gaps = 3/178 (1%)
Query: 54 DLWWNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNA 113
D WN R L+ ++ S +L+ +TF+NSP W +HP+ C ++ I + + P +
Sbjct: 226 DEEWNEIRPWLRPVLLNIVKSKRVLLEGVTFKNSPSWCLHPLSCEHITIHNVKVFNPWYS 285
Query: 114 PNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTC 173
N D +D +S N I + ++GDD + +KSG D G P N+IV+ +
Sbjct: 286 QNGDALDLESCKNALIINNIFDAGDDAICIKSGKDEDGRKRGEPCQNVIVKN-NTVLHGH 344
Query: 174 SGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIP 231
G +GSEMSGG+ NV V G+R K+ +GRGG +E I I NI M + IP
Sbjct: 345 GGFVVGSEMSGGVKNVYVTDCTFLGTDVGLRFKSTRGRGGVVEGIYIHNINM--IDIP 400
>gi|262408402|ref|ZP_06084949.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294647547|ref|ZP_06725126.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294807593|ref|ZP_06766388.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345508616|ref|ZP_08788242.1| glycoside hydrolase family 28 [Bacteroides sp. D1]
gi|262353954|gb|EEZ03047.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292637115|gb|EFF55554.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294445208|gb|EFG13880.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345455044|gb|EEO51505.2| glycoside hydrolase family 28 [Bacteroides sp. D1]
Length = 511
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 122/242 (50%), Gaps = 33/242 (13%)
Query: 13 YGRGRERLGGRHI----SLIHGDHLTNVIITGYNGTIDGQGQMWWDLWW----------- 57
Y R R+ G + ++I+ + N ++G GT+D +G+++WD +W
Sbjct: 134 YPEFRSRIAGIEMTWPAAVINIVNEKNAAVSG-EGTLDCRGKVFWDKYWEMRKEYEKKGL 192
Query: 58 ----NRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPL-- 111
+ K RG LVE S++I + T + FW +Y I G+ I L
Sbjct: 193 RWIVDYDCKRVRGILVE--RSSDITLKGFTLMRTGFWGCQVLYSNYCTIDGLVINNNLGG 250
Query: 112 NAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVR----RVS 167
+ P+TDGID DSSTN+ IE+C ++ DD + +KSG D G+ + P+ NI++R R
Sbjct: 251 HGPSTDGIDIDSSTNILIENCDVDCNDDNICIKSGRDADGLRVNLPTENIVIRNCIARKG 310
Query: 168 GTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMER 227
TC GSE SG I N+ L +A +R+K+ RGG IENI + ++K E
Sbjct: 311 AGLITC-----GSETSGSIRNILGYNLQAVGTSAVLRLKSAMNRGGTIENIYMTDVKAEN 365
Query: 228 VK 229
V+
Sbjct: 366 VR 367
>gi|445494991|ref|ZP_21462035.1| pectin lyase fold-containing protein [Janthinobacterium sp. HH01]
gi|444791152|gb|ELX12699.1| pectin lyase fold-containing protein [Janthinobacterium sp. HH01]
Length = 868
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 79/234 (33%), Positives = 116/234 (49%), Gaps = 24/234 (10%)
Query: 43 GTIDGQG--------QMWWDLWWNRTLKHTRGH---LVELMNSNNILISNLTFRNSPFWT 91
G IDGQG + WW L + R + L+E+ S + + +T RNSP +
Sbjct: 139 GAIDGQGGHVVDGASESWWQLARRAQKEDARQNVPRLIEVTGSQDFTLHKITLRNSPNFH 198
Query: 92 IHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYG 151
+ GM I P A NTDGIDP SS N+ I +I +GDD VA+K+G
Sbjct: 199 VTLNNVDGFTAWGMRIDTPATARNTDGIDPISSRNITIAYSHIRTGDDNVAIKAG----- 253
Query: 152 IAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGR 211
+ P+ NI + + + G+ IGSE +GG+ V VD L++ +G+RIK+D R
Sbjct: 254 --SSGPTENISI--LHNHFYSGHGMSIGSETNGGVRRVLVDDLNMDGTTSGLRIKSDVSR 309
Query: 212 GGYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSV 265
GG ++ ++ RN+ + VK PI IS N + +P I+F V SV
Sbjct: 310 GGVVDQVSYRNVCLRDVKTPIDISTRYNPRAEGAL----IPVYTNIAFDGVHSV 359
>gi|329964701|ref|ZP_08301755.1| polygalacturonase [Bacteroides fluxus YIT 12057]
gi|328525101|gb|EGF52153.1| polygalacturonase [Bacteroides fluxus YIT 12057]
Length = 506
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 90/169 (53%), Gaps = 1/169 (0%)
Query: 57 WNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNT 116
W R +V L+ N+ + + F+NSP W +HP+ C NV+++ + + P A N
Sbjct: 219 WQSVRHFLRPVMVSLIECRNVWLQGVIFQNSPAWNLHPLMCENVLVEEVQVRNPSYAQNG 278
Query: 117 DGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGV 176
DG+D +S N I + + GDD + +KSG D G AR N++V + G
Sbjct: 279 DGLDLESCRNALIVNSTFDVGDDGICLKSGKDEDGRRRARVCENVVVDGCT-VFKGHGGF 337
Query: 177 GIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKM 225
+GSEMSGG+ NV+V G+R K+ +GRGG +ENI + N+ M
Sbjct: 338 VVGSEMSGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGIVENIWVTNVSM 386
>gi|302671860|ref|YP_003831820.1| polygalacturonase Pgl28A [Butyrivibrio proteoclasticus B316]
gi|302396333|gb|ADL35238.1| polygalacturonase Pgl28A [Butyrivibrio proteoclasticus B316]
Length = 524
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/217 (35%), Positives = 113/217 (52%), Gaps = 9/217 (4%)
Query: 24 HISLIHGDHLTNVIITGYNGTIDGQ-GQMWWDLWWNRTLKHT--RGHLVELMNSNNILIS 80
+ SLI N+ I G GTIDG G W W N +K R + L+ + +
Sbjct: 179 YASLITAIDAQNLDIIG-PGTIDGNAGNSDW--WVNAKVKRGAWRPFAMYLVRCQKVRVQ 235
Query: 81 NLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDL 140
N+ +NSP WT+HP Y ++ + I P ++PNTDG+DP+S NV + I GDD
Sbjct: 236 NVRVQNSPCWTVHPYYSDDLAFLNLYIHNPSDSPNTDGLDPESCKNVLVAGTTISVGDDC 295
Query: 141 VAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAA 200
+A+KSG + + + + NII+R S V +GSE++GG+ NV V Q
Sbjct: 296 MAIKSGKFYMSMEHHKVTENIIIRNCRFERGHGS-VTVGSEVAGGVKNVRVTQCIFDGTD 354
Query: 201 AGVRIKTDKGRG--GYIENITIRNIKMERVKIPIRIS 235
G+RIKT +GRG +++I NI M V +P ++
Sbjct: 355 RGLRIKTRRGRGERSVLDDILFENIDMNGVHMPFTVN 391
>gi|291514459|emb|CBK63669.1| Endopolygalacturonase [Alistipes shahii WAL 8301]
Length = 555
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 119/255 (46%), Gaps = 18/255 (7%)
Query: 57 WNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNT 116
+ R R ++ + + N+L+ + F+NSP W IHP C N+++ +T+ P A N
Sbjct: 218 FERMHDFLRPVMIAVHHCENVLLEGVIFQNSPCWNIHPAMCTNLIVNDITVRCPDYAQNG 277
Query: 117 DGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGV 176
DGID +S NV + + + GDD + +KSG D G P NI+V G
Sbjct: 278 DGIDIESCRNVVLTNSRFDVGDDGICIKSGKDKAGRDRGIPCENILVDNCI-VFHGHGGF 336
Query: 177 GIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERV-KIPIRIS 235
+GSEMSGG+ NV V G+R K+ +GRGG +ENI I +I M + + P+
Sbjct: 337 VVGSEMSGGVRNVRVSNCTFSGTDVGLRFKSARGRGGVVENIWIEDIAMNNILQEPLLFD 396
Query: 236 -----RGSNDHPDEGWD-------PKAL----PKIRGISFVNVVSVNTTKAPVLAGIIGT 279
+ +++ EG D PK + P R I NV +A G+
Sbjct: 397 LFYGGKSASEAHAEGGDAEVTDIAPKPVDETTPAFRDIHIRNVWCRGARRAMYFNGLPEM 456
Query: 280 QFEEICMKNVSLLGL 294
E + ++N + +
Sbjct: 457 NVERVTVENTQIYAV 471
>gi|386722797|ref|YP_006189123.1| hypothetical protein B2K_11610 [Paenibacillus mucilaginosus K02]
gi|384089922|gb|AFH61358.1| hypothetical protein B2K_11610 [Paenibacillus mucilaginosus K02]
Length = 518
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 97/321 (30%), Positives = 148/321 (46%), Gaps = 39/321 (12%)
Query: 2 DEWPIIDPLPSYGRGRERLGGRHISLIHGD-----HLTNVIITGYNGTIDGQGQMWWDLW 56
D++P+ + GRE+L + SLI+ L +II G G ID G +
Sbjct: 168 DDYPV---MQYRWEGREQLC--YASLINTKDPAEGRLEQIIIEG-EGKIDANGMALFHKE 221
Query: 57 WNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAP-- 114
K RG V L N + + + ++T R SP W +H +YC V + + I +
Sbjct: 222 MAEK-KGFRGRAVCLRNVDGVYLKDITVRQSPAWCVHLIYCNGVSVNHIEIHTKKDEHGR 280
Query: 115 ------NTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSG 168
N DG++PDS+++V I + I S DD +A+KSG + G + PS NI R+S
Sbjct: 281 RYEHIFNGDGLNPDSTSDVYIFNSMIASQDDCIAIKSGRNEEGRRVGIPSQNI---RISN 337
Query: 169 TT-PTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMER 227
T + GV GSEMSGG+ NV + D + IK +GRG IEN+T+ + +
Sbjct: 338 CTFKSGFGVATGSEMSGGVRNVRISDCRFEDVYSIATIKAPRGRGAVIENVTVEDCTLTN 397
Query: 228 VKIP---IRISRGS------NDHPDEGWDP-----KALPKIRGISFVNVV-SVNTTKAPV 272
+ R RG+ H D D + IR I N+V + A
Sbjct: 398 YSLEHEDCRWFRGAINIDQFYSHADFDADKVEEVDEGTSVIRNIHLKNIVLDTHAGNAVF 457
Query: 273 LAGIIGTQFEEICMKNVSLLG 293
+AG+ + + I ++NV+ LG
Sbjct: 458 MAGLPESPLQNIRLENVNALG 478
>gi|329957634|ref|ZP_08298109.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328522511|gb|EGF49620.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 533
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 90/172 (52%), Gaps = 1/172 (0%)
Query: 54 DLWWNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNA 113
D WN R L+ ++ S +L+ +TF+NSP W +HP+ C ++ I + + P +
Sbjct: 224 DEEWNEIRPWLRPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITINQVKVFNPWYS 283
Query: 114 PNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTC 173
N D +D +S N I + ++GDD + +KSG D G P N+IV+ +
Sbjct: 284 QNGDALDLESCKNALIINNIFDAGDDAICIKSGKDEDGRKRGEPCQNVIVKN-NTVLHGH 342
Query: 174 SGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKM 225
G +GSEMSGG+ N+ V G+R K+ +GRGG +E I I NI M
Sbjct: 343 GGFVVGSEMSGGVKNIYVTDCTFLGTDVGLRFKSTRGRGGVVEGIYIHNIHM 394
>gi|326797905|ref|YP_004315724.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326548669|gb|ADZ77054.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 485
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 119/246 (48%), Gaps = 46/246 (18%)
Query: 24 HISLIHGDHLTNVIITGYNGTIDGQGQ--MWWDLWWNRTLKH-----------TRGHLVE 70
+ S I+ N+ +TG NG +DG WW WW K+ R L E
Sbjct: 154 YASFIYAYGEENIAVTG-NGILDGNANNDYWW--WWCGAKKYGWREELGKQTPARNALHE 210
Query: 71 LMNSN-------------------------NILISNLTFRNSPFWTIHPVYCRNVVIKGM 105
+M+ N+ I+++ NSP W ++PV C NV+I+ +
Sbjct: 211 MMHEEVDPKKRIFGDGHYLRPNFIQPYQCKNVWIADVKLINSPMWNLNPVLCENVLIEKV 270
Query: 106 TILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRR 165
+++ + PN DG DP++ NV I DCY ++GDD +A+KSG D G + RP+ N I+
Sbjct: 271 KVIS--HGPNNDGCDPEACKNVWIRDCYFDTGDDCIAIKSGRDEDGRNIGRPAENHIIEN 328
Query: 166 VSGTTPTCSGVGIGSEMSGGIFNVTV--DQLHVWDAAAGVRIKTDKGRGGYIENITIRNI 223
GV IGSE++GG N+ ++ + +RIKT RGG IEN+ ++N+
Sbjct: 329 CV-MKDGHGGVVIGSEIAGGAKNIYAINCEMDSPNLDRVLRIKTSSSRGGIIENVFMKNV 387
Query: 224 KMERVK 229
++ K
Sbjct: 388 QVGTFK 393
>gi|388258052|ref|ZP_10135230.1| glycoside hydrolase family 28 [Cellvibrio sp. BR]
gi|387938173|gb|EIK44726.1| glycoside hydrolase family 28 [Cellvibrio sp. BR]
Length = 513
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 160/338 (47%), Gaps = 41/338 (12%)
Query: 10 LPSYGRGRERLGGRHI----SLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNR------ 59
+ SY R + R+ G I +L++ +V I G GTIDG G ++W +W++
Sbjct: 145 IESYPRQKTRIAGIEIVWPSALLNVYEQADVHIYG-EGTIDGNGMVFWQTFWDKRNVYEG 203
Query: 60 -------TLKHTRGHLVELMNSNNI-LISNLTFRNSPFWTIHPVYCRNVVIKGMTIL--A 109
R L+++ NS I L L + + FWT+ VY +V + + I +
Sbjct: 204 KGLRWAADYDAERPRLIQVYNSKRIELGGGLHMKRAGFWTLQIVYSNDVKVSNVVIRNNS 263
Query: 110 PLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGT 169
P+TDGID DSS +V +E I+ DD + +K+G D G+ + RP+ ++++R S
Sbjct: 264 DGKGPSTDGIDIDSSHHVLVEKADIDVNDDALCLKAGRDADGLRVNRPTEHVVIRD-SII 322
Query: 170 TPTCSGVGIGSEMSGGIFNVTVDQLHVWD-AAAGVRIKTDKGRGGYIENITIRNIKMERV 228
+GV GSE SG I N+ V L V +G+ K+ RGG + +I IR++K++
Sbjct: 323 RHAEAGVTFGSETSGSIRNIDVYNLDVQGPVYSGIFFKSAHVRGGTVSDIRIRDMKVQNA 382
Query: 229 KIPIRISR-------------GSNDHPDEGWDPKA--LPKIRGISFVNVVSVNTTKAPVL 273
+ +R+ G + P E W A +PK +G+ + + ++ KA
Sbjct: 383 EAAVRVDLNWLPVYSYPVIPPGIKNVP-EHWKILATPVPKEKGMPKLRDIHISNIKAEAN 441
Query: 274 AGIIGTQFEEICMKNV--SLLGLAPSAKWQCQFVSGFT 309
A + + E ++NV S + + +A GF+
Sbjct: 442 AAFLMQGYAEAPLQNVHFSNMHITAAASGAITHARGFS 479
>gi|346224313|ref|ZP_08845455.1| glycoside hydrolase family protein [Anaerophaga thermohalophila DSM
12881]
Length = 572
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 148/364 (40%), Gaps = 85/364 (23%)
Query: 1 MDEWPIIDP----LPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMW---- 52
D++P+ID L +Y R +S +H L N+ TG NG DG G W
Sbjct: 131 FDDYPLIDTSFEGLNTY---------RCMSPVHAHGLENIAFTG-NGIFDGNGDAWRPVK 180
Query: 53 --------W--------------DLWW-------------------------NRTLKHTR 65
W ++W+ + R
Sbjct: 181 KSKMTESQWKKLVNSGGVLSDDGEIWYPSEKSKAGDSRDNFNVPDLKTKEDFEKIKDFLR 240
Query: 66 GHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSST 125
+V + +L+ TF+NSP W IHP+ R+++I+ +T+ P + N DG+D +S
Sbjct: 241 PVMVSIKGCKQVLLDGPTFQNSPAWNIHPLMSRDIIIRNLTVRNPWYSQNGDGLDLESCK 300
Query: 126 NVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGG 185
NV I + + GDD + KSG + G P+ N+IV+ + G IGSEMSGG
Sbjct: 301 NVLIYNNSFDVGDDAICFKSGKNEDGRRRGVPTENVIVKN-NVVYHGHGGFVIGSEMSGG 359
Query: 186 IFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKI-PIR----------- 233
+ NV V G+R K+ +GRGG +ENI I NI M + PIR
Sbjct: 360 VRNVHVANCTFIGTDVGLRFKSTRGRGGVVENIYIFNIDMIDIPTEPIRFNLFYGGNAPL 419
Query: 234 ISRGSNDHPDEGWDPKAL------PKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMK 287
+ G N P G + K + P R I N+ + A G+ + I ++
Sbjct: 420 LDDGGNSVP-SGKEAKPVPVTEETPSFRNIFMKNIRANGFGNAAFFMGLPEMNLQNIHLE 478
Query: 288 NVSL 291
N L
Sbjct: 479 NAVL 482
>gi|410664607|ref|YP_006916978.1| polygalacturonase pga28A [Simiduia agarivorans SA1 = DSM 21679]
gi|409026964|gb|AFU99248.1| polygalacturonase pga28A [Simiduia agarivorans SA1 = DSM 21679]
Length = 466
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 108/195 (55%), Gaps = 9/195 (4%)
Query: 65 RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSS 124
R V+ N + I +T NSPFW +HPV C +VV++G+T + + PN DG DP+S
Sbjct: 223 RPAFVQFYACNQVKIEGVTLVNSPFWLLHPVLCESVVVRGVTCRS--HGPNNDGCDPESC 280
Query: 125 TNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSG 184
NV IE C ++GDD +A+KSG + G + N++VR G+ +GSE+SG
Sbjct: 281 KNVLIEQCVFDTGDDCIALKSGRNEDGRRVGVAVENVVVRHCE-MRDGHGGLVLGSEISG 339
Query: 185 GIFNVTVDQ--LHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
G N+ ++ ++ +R KT+ RGG IE + +R++ +++ + + + N H
Sbjct: 340 GARNIFMEHCSMNSPHLERALRFKTNARRGGVIEKVRVRHVHIQQAQEALVV----NFHY 395
Query: 243 DEGWDPKALPKIRGI 257
+EG + +P +R I
Sbjct: 396 EEGEAGEHMPTVRDI 410
>gi|399024363|ref|ZP_10726403.1| endopolygalacturonase [Chryseobacterium sp. CF314]
gi|398080600|gb|EJL71406.1| endopolygalacturonase [Chryseobacterium sp. CF314]
Length = 467
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 117/246 (47%), Gaps = 45/246 (18%)
Query: 24 HISLIHGDHLTNVIITGYNGTIDGQGQ--MWWDLW-------WNRTL------------- 61
+ SLI+ N+ ITG GT+DG WW W WN +
Sbjct: 137 YSSLIYAHEEENIAITG-KGTLDGNSDNDHWW-FWCGAKKYGWNESRPGRQNPARAKLHE 194
Query: 62 ----------------KHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGM 105
+ R + V+ S N ++++ +NSP W ++PV C NV+I+ +
Sbjct: 195 YMAQKKDPRERIFGDGYYLRPNFVQPYKSKNFYMADVLVKNSPMWNLNPVLCENVLIERV 254
Query: 106 TILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRR 165
+++ + PN DG DP++ NV I+D Y ++GDD +A+KSG D G + +P+ N I+
Sbjct: 255 KVIS--HGPNNDGFDPEACKNVWIKDSYFDTGDDCIAIKSGRDEDGRGIGKPAENHIIEN 312
Query: 166 VSGTTPTCSGVGIGSEMSGGIFNVTV--DQLHVWDAAAGVRIKTDKGRGGYIENITIRNI 223
GV IGSE++GG N+ + + + +RIKT RGG IEN+ N
Sbjct: 313 CE-MKDGHGGVVIGSEIAGGAKNIYAIGNVMDSKNLERALRIKTSSNRGGIIENVFFYNT 371
Query: 224 KMERVK 229
K+ K
Sbjct: 372 KVGAYK 377
>gi|167764884|ref|ZP_02437005.1| hypothetical protein BACSTE_03276 [Bacteroides stercoris ATCC
43183]
gi|167697553|gb|EDS14132.1| polygalacturonase (pectinase) [Bacteroides stercoris ATCC 43183]
Length = 550
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 90/172 (52%), Gaps = 1/172 (0%)
Query: 54 DLWWNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNA 113
D WN R L+ ++ S +L+ +TF+NSP W +HP+ C ++ I + + P +
Sbjct: 242 DEEWNEIRPWLRPVLLNIVKSKRVLLEGVTFKNSPSWCLHPLSCEHITINQVKVFNPWYS 301
Query: 114 PNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTC 173
N D +D +S N I + ++GDD + +KSG D G P N+IV+ +
Sbjct: 302 QNGDALDLESCKNALIINNIFDAGDDAICIKSGKDEDGRKRGEPCQNVIVKN-NTVLHGH 360
Query: 174 SGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKM 225
G +GSEMSGG+ N+ V G+R K+ +GRGG +E I I NI M
Sbjct: 361 GGFVVGSEMSGGVKNIYVTDCTFLGTDVGLRFKSTRGRGGVVEGIYIHNIHM 412
>gi|374312327|ref|YP_005058757.1| glycoside hydrolase family protein [Granulicella mallensis
MP5ACTX8]
gi|358754337|gb|AEU37727.1| glycoside hydrolase family 28 [Granulicella mallensis MP5ACTX8]
Length = 543
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 136/294 (46%), Gaps = 42/294 (14%)
Query: 35 NVIITGYNGTIDGQGQMWW-----------DLW-----WNRTLKHTR--GHLVELMNSNN 76
++ ITG+ GTIDG G +W DLW W+ R ++EL N
Sbjct: 126 DIAITGH-GTIDGGGSAFWHRKGRSTPRPEDLWGDVIAWDYEPATPRRPSPMIELARCRN 184
Query: 77 ILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIES 136
+ I +T N+P WT+ PV C V+I+G+ + P+ APNTDG+D + NV + DC I +
Sbjct: 185 VRIEGVTLTNAPGWTLRPVACETVLIRGIRVRNPIYAPNTDGMDITACRNVFVSDCDIAT 244
Query: 137 GDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHV 196
GDD + +KS + YG + P+ NI V +T C+G +G+ G + N+ +
Sbjct: 245 GDDAICIKS-ENPYGELL--PTKNITVTNCVLST-CCNGFKVGTSTHGRVENIVFSNSVI 300
Query: 197 WD---------AAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPDEGWD 247
++ A +G+ ++ GG + + I NI+ME + P+ + G
Sbjct: 301 YNESTTPLNERATSGIALEVVD--GGSMSGVLISNIQMENARTPLFVRLGRR-------K 351
Query: 248 PKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL-LGLAPSAKW 300
P +RGI F + + + G+ E++ + N S + SA W
Sbjct: 352 PAQGSFLRGIRFEQIHATGALLTSSITGLPDMPVEDVVIANSSFRMSEHGSAAW 405
>gi|315500573|ref|YP_004089375.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
gi|315418585|gb|ADU15224.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
Length = 476
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/224 (33%), Positives = 115/224 (51%), Gaps = 24/224 (10%)
Query: 34 TNVIITGYNGTIDGQGQMWWD-------------LWWNRTLKHTRGHLVELMNSNNILIS 80
T+V I G G IDG G+++WD L W R L+++ NS+ I +
Sbjct: 138 TDVRIYG-EGKIDGNGKVFWDRFQSIRADYEARGLRWAADYDAQRPRLIQIYNSSRIELG 196
Query: 81 N------LTFRNSPFWTIHPVYCRNVVIKGMTILAPLNA--PNTDGIDPDSSTNVCIEDC 132
N L S FWT+ VY +V + G+T+ ++ P+TDG+D DSS + +E
Sbjct: 197 NGPMAEPLQLARSGFWTVQIVYSHDVKVSGITVRNNIDGKGPSTDGVDIDSSHTILVEHA 256
Query: 133 YIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVD 192
I++ DD + +K+G D G+ + RP+ N+++R S +GV GSE SGGI NV V
Sbjct: 257 DIDANDDALCLKAGRDADGLRVNRPTENVVIRN-STIRAAYAGVTFGSETSGGIRNVRVH 315
Query: 193 QLHVWDAAA-GVRIKTDKGRGGYIENITIRNIKMERVKIPIRIS 235
L V G+ K+ RGG +I I +I + + + IRI+
Sbjct: 316 DLRVIGPVRYGILFKSAATRGGGASDIDISDIDVAQAETGIRIN 359
>gi|160892048|ref|ZP_02073051.1| hypothetical protein BACUNI_04508 [Bacteroides uniformis ATCC 8492]
gi|156858526|gb|EDO51957.1| polygalacturonase (pectinase) [Bacteroides uniformis ATCC 8492]
Length = 471
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 90/163 (55%), Gaps = 10/163 (6%)
Query: 65 RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSS 124
R HL+ L N+L+ R SPFWTIH C+ +++G+ + A N N DGID + S
Sbjct: 206 RPHLIHLNRCRNVLLDGFKIRESPFWTIHLYMCKGGIVRGLDVKA--NGHNNDGIDLEMS 263
Query: 125 TNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSG 184
N IE+C + GDD V +KSG + + P NI+VR + +GIGSE+SG
Sbjct: 264 RNFLIENCKFDQGDDAVVIKSGRNRDAWRLGTPCENIVVRNCQ-VMEGHTLLGIGSELSG 322
Query: 185 GIFNVTVDQLHVWDAAAGVR----IKTDKGRGGYIENITIRNI 223
G+ NV +H D A V IKT++ RGG +ENI + ++
Sbjct: 323 GVRNV---YMHHCDVPASVHCLFFIKTNRRRGGIVENIYLEDV 362
>gi|329962420|ref|ZP_08300420.1| polygalacturonase [Bacteroides fluxus YIT 12057]
gi|328529976|gb|EGF56864.1| polygalacturonase [Bacteroides fluxus YIT 12057]
Length = 532
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 90/172 (52%), Gaps = 1/172 (0%)
Query: 54 DLWWNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNA 113
D WN R L+ ++ S +L+ +TF+NSP W +HP+ C ++ I + + P +
Sbjct: 224 DEEWNEIRPWLRPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITINNVKVFNPWYS 283
Query: 114 PNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTC 173
N D +D +S N I + ++GDD + +KSG D G P N++V+ +
Sbjct: 284 QNGDALDLESCKNALIINNIFDAGDDAICIKSGKDEDGRRRGEPCQNVVVKD-NTVLHGH 342
Query: 174 SGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKM 225
G +GSEMSGG+ N+ V G+R K+ +GRGG +E I I NI M
Sbjct: 343 GGFVVGSEMSGGVKNIYVSDCTFLGTDVGLRFKSTRGRGGVVEGIYIHNIHM 394
>gi|150004702|ref|YP_001299446.1| glycoside hydrolase [Bacteroides vulgatus ATCC 8482]
gi|149933126|gb|ABR39824.1| glycoside hydrolase family 28 [Bacteroides vulgatus ATCC 8482]
Length = 471
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 90/163 (55%), Gaps = 10/163 (6%)
Query: 65 RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSS 124
R HL+ L N+L+ R SPFWTIH C+ +++G+ + A N N DGID + S
Sbjct: 206 RPHLIHLNRCRNVLLDGFKIRESPFWTIHLYMCKGGIVRGLDVKA--NGHNNDGIDLEMS 263
Query: 125 TNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSG 184
N IE+C + GDD V +KSG + + P NI+VR + +GIGSE+SG
Sbjct: 264 RNFLIENCKFDQGDDAVVIKSGRNRDAWRLGTPCENIVVRNCQ-VMEGHTLLGIGSELSG 322
Query: 185 GIFNVTVDQLHVWDAAAGVR----IKTDKGRGGYIENITIRNI 223
G+ NV +H D A V IKT++ RGG +ENI + ++
Sbjct: 323 GVRNV---YMHHCDVPASVHCLFFIKTNRRRGGIVENIYLEDV 362
>gi|262408433|ref|ZP_06084980.1| glycoside hydrolase family 28 [Bacteroides sp. 2_1_22]
gi|294643092|ref|ZP_06720926.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294808960|ref|ZP_06767684.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345508645|ref|ZP_08788271.1| glycoside hydrolase family 28 [Bacteroides sp. D1]
gi|262353985|gb|EEZ03078.1| glycoside hydrolase family 28 [Bacteroides sp. 2_1_22]
gi|292641551|gb|EFF59735.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294443841|gb|EFG12584.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345455055|gb|EEO51472.2| glycoside hydrolase family 28 [Bacteroides sp. D1]
Length = 487
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/236 (31%), Positives = 117/236 (49%), Gaps = 37/236 (15%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWW---------------NRTLKHTRGHLVELMNSNNILI 79
N +TG G ID +G+++WD +W + K RG LV NS +I +
Sbjct: 150 NAALTG-EGFIDCRGKVFWDKYWAMREEYEKKNLRWIVDYDCKRVRGVLVS--NSKHITL 206
Query: 80 SNLTFRNSPFWTIHPVYCRNVVIKGMTILAPL--NAPNTDGIDPDSSTNVCIEDCYIESG 137
+ T + FW +Y + + G+TI + + P+TDGID DSSTN+ +E+C ++
Sbjct: 207 KDFTLVRTGFWACQILYSDHCSVSGLTINNNVGGHGPSTDGIDIDSSTNILVENCDVDCN 266
Query: 138 DDLVAVKSGWDHYGIAMARPSSNIIVR----RVSGTTPTCSGVGIGSEMSGGIFNVTVDQ 193
DD + +K+G D G+ + RP+ N++VR R TC GSE SG I NV
Sbjct: 267 DDNICIKAGRDADGLRVNRPTENVVVRNCIARKGAGLLTC-----GSETSGSIRNVLAHD 321
Query: 194 LHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDPK 249
L + + +R+K+ RGG +ENI + ++ + V + + D W PK
Sbjct: 322 LIAYGTGSVLRLKSSMNRGGTVENIYVTGVEADSVSNVLEV--------DLNWHPK 369
>gi|237721252|ref|ZP_04551733.1| glycoside hydrolase family 28 protein [Bacteroides sp. 2_2_4]
gi|229449048|gb|EEO54839.1| glycoside hydrolase family 28 protein [Bacteroides sp. 2_2_4]
Length = 487
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/236 (31%), Positives = 117/236 (49%), Gaps = 37/236 (15%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWW---------------NRTLKHTRGHLVELMNSNNILI 79
N +TG G ID +G+++WD +W + K RG LV NS +I +
Sbjct: 150 NAALTG-EGFIDCRGKVFWDKYWAMREEYEKKNLRWIVDYDCKRVRGVLVS--NSKHITL 206
Query: 80 SNLTFRNSPFWTIHPVYCRNVVIKGMTILAPL--NAPNTDGIDPDSSTNVCIEDCYIESG 137
+ T + FW +Y + + G+TI + + P+TDGID DSSTN+ +E+C ++
Sbjct: 207 KDFTLVRTGFWACQILYSDHCSVSGLTINNNIGGHGPSTDGIDIDSSTNILVENCDVDCN 266
Query: 138 DDLVAVKSGWDHYGIAMARPSSNIIVR----RVSGTTPTCSGVGIGSEMSGGIFNVTVDQ 193
DD + +K+G D G+ + RP+ N++VR R TC GSE SG I NV
Sbjct: 267 DDNICIKAGRDADGLRVNRPTENVVVRNCIARKGAGLLTC-----GSETSGSIRNVLAHD 321
Query: 194 LHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDPK 249
L + + +R+K+ RGG +ENI + ++ + V + + D W PK
Sbjct: 322 LIAYGTGSVLRLKSSMNRGGTVENIYVTGVEADSVSNVLEV--------DLNWHPK 369
>gi|218129299|ref|ZP_03458103.1| hypothetical protein BACEGG_00876 [Bacteroides eggerthii DSM 20697]
gi|217988476|gb|EEC54797.1| polygalacturonase (pectinase) [Bacteroides eggerthii DSM 20697]
Length = 533
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 114/251 (45%), Gaps = 21/251 (8%)
Query: 57 WNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNT 116
WN R L+ ++ S +L+ +TF+NSP W +HP+ C ++ I + + P + N
Sbjct: 227 WNEIRPWLRPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITINQVKVFNPWYSQNG 286
Query: 117 DGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGV 176
D +D +S N I + ++GDD + +KSG D G P N+IV+ + G
Sbjct: 287 DALDLESCKNALIINNIFDAGDDAICIKSGKDKDGRERGEPCQNVIVKN-NTVLHGHGGF 345
Query: 177 GIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIP----- 231
+GSEMSGG+ N+ V G+R K+ +GRGG +E I I NI M + IP
Sbjct: 346 VVGSEMSGGVKNIYVADCTFLGTDVGLRFKSTRGRGGVVEGIYIHNIHM--IDIPHEPLL 403
Query: 232 ---IRISRGSNDHPDEGWDPK----------ALPKIRGISFVNVVSVNTTKAPVLAGIIG 278
+ + + +E + P R I N++ + +A G+
Sbjct: 404 FDLFYGGKAAGEETEEDLKSRMKASIPEVTVETPSFRNIHISNIICKGSGRAMFFNGLPE 463
Query: 279 TQFEEICMKNV 289
+ +KNV
Sbjct: 464 MPIRNVTVKNV 474
>gi|315650888|ref|ZP_07903931.1| pectin lyase [Lachnoanaerobaculum saburreum DSM 3986]
gi|315486867|gb|EFU77206.1| pectin lyase [Lachnoanaerobaculum saburreum DSM 3986]
Length = 360
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 99/182 (54%), Gaps = 7/182 (3%)
Query: 26 SLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKHT---RGHLVELMNSNNILISNL 82
+LI G + NV+I G G +DG M WW K R + V L N NI + L
Sbjct: 183 ALITGLSVENVLIYG-EGILDGNAGML--DWWKDAKKKNIAWRPNTVFLHNCKNIAMQGL 239
Query: 83 TFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVA 142
NSP WT+HP Y N++ TI+ P N+PNTDG+DP+S NV I I GDD +A
Sbjct: 240 CIMNSPSWTLHPYYSDNLLFLNNTIMNPDNSPNTDGLDPESCENVLILGADISVGDDCIA 299
Query: 143 VKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAG 202
+KSG + + +P+ NI++R S V IGSE++ G+++V+V+ +++ G
Sbjct: 300 IKSGKYYMALRHYKPAKNIVIRN-SIFRKGHGSVTIGSEVAAGVYDVSVENVYLKGRTEG 358
Query: 203 VR 204
+
Sbjct: 359 LE 360
>gi|317475267|ref|ZP_07934533.1| exo-poly-alpha-D-galacturonosidase [Bacteroides eggerthii
1_2_48FAA]
gi|316908521|gb|EFV30209.1| exo-poly-alpha-D-galacturonosidase [Bacteroides eggerthii
1_2_48FAA]
Length = 533
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 114/251 (45%), Gaps = 21/251 (8%)
Query: 57 WNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNT 116
WN R L+ ++ S +L+ +TF+NSP W +HP+ C ++ I + + P + N
Sbjct: 227 WNEIRPWLRPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITINQVKVFNPWYSQNG 286
Query: 117 DGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGV 176
D +D +S N I + ++GDD + +KSG D G P N+IV+ + G
Sbjct: 287 DALDLESCKNALIINNIFDAGDDAICIKSGKDKDGRERGEPCQNVIVKN-NTVLHGHGGF 345
Query: 177 GIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIP----- 231
+GSEMSGG+ N+ V G+R K+ +GRGG +E I I NI M + IP
Sbjct: 346 VVGSEMSGGVKNIYVADCTFLGTDVGLRFKSTRGRGGVVEGIYIHNIHM--IDIPHEPLL 403
Query: 232 ---IRISRGSNDHPDEGWDPK----------ALPKIRGISFVNVVSVNTTKAPVLAGIIG 278
+ + + +E + P R I N++ + +A G+
Sbjct: 404 FDLFYGGKAAGEETEEDLKSRMKASIPEVTVETPSFRDIHISNIICKGSGRAMFFNGLPE 463
Query: 279 TQFEEICMKNV 289
+ +KNV
Sbjct: 464 MPIRNVTVKNV 474
>gi|298482095|ref|ZP_07000283.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298271652|gb|EFI13225.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 511
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 122/242 (50%), Gaps = 33/242 (13%)
Query: 13 YGRGRERLGGRHI----SLIHGDHLTNVIITGYNGTIDGQGQMWWDLWW----------- 57
Y R R+ G + ++I+ + N ++G GT+D +G+++WD +W
Sbjct: 134 YPEFRSRIAGIEMTWPAAVINIVNEKNAAVSG-EGTLDCRGKVFWDKYWEMRKEYEAKGL 192
Query: 58 ----NRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPL-- 111
+ K RG LVE S+++ + T + FW +Y I G+ I L
Sbjct: 193 RWIVDYDCKRVRGILVE--RSSDVTLKGFTLMRTGFWGCQVLYSNYCTIDGLVINNNLGG 250
Query: 112 NAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVR----RVS 167
+ P+TDGID DSSTN+ IE+C ++ DD + +KSG D G+ + P+ N+++R R
Sbjct: 251 HGPSTDGIDIDSSTNILIENCDVDCNDDNICIKSGRDADGLRVNLPTENVVIRNCIARKG 310
Query: 168 GTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMER 227
TC GSE SG I N+ L +A +R+K+ RGG IENI + ++K E
Sbjct: 311 AGLITC-----GSETSGSIRNILGYNLQAVGTSAVLRLKSAMNRGGTIENIYMTDVKAEN 365
Query: 228 VK 229
V+
Sbjct: 366 VR 367
>gi|293369336|ref|ZP_06615921.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|299148480|ref|ZP_07041542.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
gi|336404082|ref|ZP_08584781.1| hypothetical protein HMPREF0127_02094 [Bacteroides sp. 1_1_30]
gi|292635503|gb|EFF54010.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|295086728|emb|CBK68251.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
gi|298513241|gb|EFI37128.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
gi|335943733|gb|EGN05568.1| hypothetical protein HMPREF0127_02094 [Bacteroides sp. 1_1_30]
Length = 487
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/236 (31%), Positives = 117/236 (49%), Gaps = 37/236 (15%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWW---------------NRTLKHTRGHLVELMNSNNILI 79
N +TG G ID +G+++WD +W + K RG LV NS +I +
Sbjct: 150 NAALTG-EGFIDCRGKVFWDKYWAMREEYEKKNLRWIVDYDCKRVRGVLVS--NSKHITL 206
Query: 80 SNLTFRNSPFWTIHPVYCRNVVIKGMTILAPL--NAPNTDGIDPDSSTNVCIEDCYIESG 137
+ T + FW +Y + + G+TI + + P+TDGID DSSTN+ +E+C ++
Sbjct: 207 KDFTLVRTGFWACQILYSDHCSVSGLTINNNVGGHGPSTDGIDIDSSTNILVENCDVDCN 266
Query: 138 DDLVAVKSGWDHYGIAMARPSSNIIVR----RVSGTTPTCSGVGIGSEMSGGIFNVTVDQ 193
DD + +K+G D G+ + RP+ N++VR R TC GSE SG I NV
Sbjct: 267 DDNICIKAGRDADGLRVNRPTENVVVRNCIARKGAGLLTC-----GSETSGSIRNVLAHD 321
Query: 194 LHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDPK 249
L + + +R+K+ RGG +ENI + ++ + V + + D W PK
Sbjct: 322 LIAYGTGSVLRLKSSMNRGGTVENIYVTGVEADSVSNVLEV--------DLNWHPK 369
>gi|345301605|ref|YP_004821553.1| glycoside hydrolase family 28 [Enterobacter asburiae LF7a]
gi|345095542|gb|AEN67177.1| glycoside hydrolase family 28 [Enterobacter asburiae LF7a]
Length = 447
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/347 (29%), Positives = 157/347 (45%), Gaps = 62/347 (17%)
Query: 26 SLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRT------LKH---------------- 63
+LI H+ ++ ITG GTIDGQGQ W W++ LKH
Sbjct: 115 ALIIASHVQDIAITGP-GTIDGQGQKSW---WSKASDAREHLKHGDVSWFEKNWKGIPPA 170
Query: 64 ---TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGID 120
R L+E + IS L NSP W + N+ + +I P ++PNTDGID
Sbjct: 171 NGMPRPWLIEFDHVQGGNISQLHIINSPMWNLVLRNSENIDVSRSSIFNPPDSPNTDGID 230
Query: 121 PDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGS 180
SS N+ + + +GDD +A+KSG G A PSSNI + + G+ +GS
Sbjct: 231 VVSSKNISLRHLKLSTGDDDIAIKSGLASTG--KAPPSSNINIDDID--IYRGHGLSVGS 286
Query: 181 EMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRI--SRGS 238
E + GI VT+ + G+RIK+ + RG I I+ NI M V +P+ I S G
Sbjct: 287 ETANGIGRVTMQNVRFNGTDNGLRIKSGRDRGNQIGPISADNITMNHVNVPLVITDSYGG 346
Query: 239 NDHPDEGWDPKAL------------PKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICM 286
N G+ K+L P I ++ ++ + N+ A +++G+ + I +
Sbjct: 347 NG----GYSSKSLTSIPTSAISSLTPFIHDVTIQHLTATNSGMAGIISGLPEAPLQNITL 402
Query: 287 KNVSLLGLAPSAKWQCQFVSG------FTSQVFPLPCPQLQNKSSSW 327
K++ + + Q ++VSG TS+ LP LQ S W
Sbjct: 403 KDIH---IDATHGLQSRYVSGEIKNVHVTSKERDLPL--LQGPDSHW 444
>gi|288541509|gb|ADC45581.1| glycoside hydrolase [Streptomyces nanchangensis]
Length = 433
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 116/233 (49%), Gaps = 44/233 (18%)
Query: 35 NVIITGYNGTIDGQGQMW-WDLWW--------NRTL-------------------KHTRG 66
NV +TG GT+DGQ ++ W+ W+ +++L + R
Sbjct: 116 NVAVTG-PGTLDGQARLGPWESWYRSSGPQGPDQSLLRRMGSAGVPVAERVFGDGHYLRP 174
Query: 67 HLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTN 126
+V+ N+L+S LT + P WT+HPV NV ++ +T+ + L NTDG DP+ ++
Sbjct: 175 KMVQFYRCRNVLVSGLTIVDPPMWTVHPVLSTNVTVRDITVDSTLY--NTDGCDPECCSD 232
Query: 127 VCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRR--VSGTTPTCSGVGIGSEMSG 184
V I C + DD VAVKSG D G + PS NI+VR SG G+ +GSEMSG
Sbjct: 233 VLITGCRFNTNDDCVAVKSGRDEDGHRVGVPSRNIVVRDCWFSG---RWGGMTVGSEMSG 289
Query: 185 GIFNVTVDQLHV--------WDAAAGVRIKTDKGRGGYIENITIRNIKMERVK 229
G+ +V + + + + +K K RGGYI+ + IRN + V+
Sbjct: 290 GVRDVFAENCEINSPDFPGRYPVKHALYVKASKKRGGYIDGVHIRNFTGQSVE 342
>gi|225874239|ref|YP_002755698.1| endo-polygalacturonase/pectinesterase [Acidobacterium capsulatum
ATCC 51196]
gi|225792396|gb|ACO32486.1| endo-polygalacturonase/pectinesterase [Acidobacterium capsulatum
ATCC 51196]
Length = 794
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 108/220 (49%), Gaps = 21/220 (9%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQM--------WWDLWWN---RTLKHTRGHLVELMNSN 75
LI DH I G NG IDG+G WWDL R L + ++ + SN
Sbjct: 143 LITADHAPGSGIMG-NGVIDGRGGATLLGQKVTWWDLAHQAKIRDLNQSCPRILVINRSN 201
Query: 76 NILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIE 135
N ++ +T RNSP + + + G+ I P A NTDGIDP +S NV I YI
Sbjct: 202 NFILYRITLRNSPNFHVLLNHTNGFTAWGVRIDTPATARNTDGIDPAASENVTITHSYIR 261
Query: 136 SGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLH 195
GDD VA+K+G M + + G+ IGSE +GG+ ++ V+ L
Sbjct: 262 DGDDDVAIKAGTGGSSSHMTISDDHFY---------SGHGMSIGSETNGGVRDILVENLS 312
Query: 196 VWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRIS 235
+ G+RIK+D RGG ++++T RNI M V PI ++
Sbjct: 313 LDGTTNGIRIKSDLSRGGLVDHVTYRNICMRDVPHPILLT 352
>gi|392950252|ref|ZP_10315809.1| endopolygalacturonase, glycosyl hydrolases family 28 [Lactobacillus
pentosus KCA1]
gi|392434534|gb|EIW12501.1| endopolygalacturonase, glycosyl hydrolases family 28 [Lactobacillus
pentosus KCA1]
Length = 438
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 109/217 (50%), Gaps = 23/217 (10%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWWNRTLKHTRGHLVELMN-------------------SN 75
+V+I G G IDG G +WW+ +W K + + + N
Sbjct: 105 DVVIEG-PGVIDGNGPVWWERYWGTDQKGGQRKIYDAKNLRWIVDYEVKRPREVLFYRCK 163
Query: 76 NILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIE 135
N IS+LT S FW YC+ + + +T+ N P+TDGID DSS+ V + +C +
Sbjct: 164 NCAISDLTLMRSGFWNCQLTYCQQMEVSHLTV-KENNGPSTDGIDIDSSSYVRVHNCELS 222
Query: 136 SGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLH 195
GDD + VKSG D G+ + +P+++I + + GV +GSE+S GI +V + +
Sbjct: 223 CGDDCIVVKSGRDGDGLRVNQPAAHIEIDHC--IIHSGYGVTLGSEVSAGISDVHIHDMI 280
Query: 196 VWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPI 232
+ G R+K+ RGG I+N+ +++M V+ P
Sbjct: 281 FENTDCGFRMKSSADRGGVIKNVVAEHLEMHNVQFPF 317
>gi|298383805|ref|ZP_06993366.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
gi|298263409|gb|EFI06272.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
Length = 506
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 123/249 (49%), Gaps = 34/249 (13%)
Query: 5 PIIDPLPSYGRGRERLGGRHI----SLIHGDHLTNVIITGYNGTIDGQGQMWWDLWW--- 57
P I P + R R+ G + ++I+ N I+G GT+D +G+++WD +W
Sbjct: 124 PDIHHYPEF---RSRIAGIEMTWPAAVINIVDEKNAAISG-EGTLDCRGKVFWDKYWEMR 179
Query: 58 ------------NRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGM 105
+ K RG LVE S++I +S T + FW +Y I G+
Sbjct: 180 KEYEARGLRWIVDYDCKRVRGILVE--RSSDITLSGFTLMRTGFWGCQILYSDYCTIDGL 237
Query: 106 TILAPL--NAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIV 163
TI + + P+TDGID DSS N+ IE+C ++ DD + +KSG D G+ + RP+ N++V
Sbjct: 238 TINNNIGGHGPSTDGIDIDSSCNILIENCDVDCNDDNICIKSGRDADGLRVNRPTENVVV 297
Query: 164 RRVSGTTPTCSGVGI---GSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITI 220
R + G G+ GSE SG I NV L +R+K+ RGG IENI +
Sbjct: 298 RNCTAR----KGAGLITCGSETSGSIRNVLGYDLKAVGTYTVLRLKSAMNRGGTIENIYM 353
Query: 221 RNIKMERVK 229
+ E V+
Sbjct: 354 TRVSAENVR 362
>gi|383120489|ref|ZP_09941217.1| parallel beta-helix [Bacteroides sp. 1_1_6]
gi|251840459|gb|EES68541.1| parallel beta-helix [Bacteroides sp. 1_1_6]
Length = 506
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/241 (32%), Positives = 120/241 (49%), Gaps = 31/241 (12%)
Query: 13 YGRGRERLGGRHI----SLIHGDHLTNVIITGYNGTIDGQGQMWWDLWW----------- 57
Y R R+ G + ++I+ N I+G GT+D +G+++WD +W
Sbjct: 129 YPEFRSRIAGIEMTWPAAVINIVDEKNAAISG-EGTLDCRGKVFWDKYWEMRKEYEARGL 187
Query: 58 ----NRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPL-- 111
+ K RG LVE S++I +S T + FW +Y I G+TI +
Sbjct: 188 RWIVDYDCKRVRGILVE--RSSDITLSGFTLMRTGFWGCQILYSDYCTIDGLTINNNIGG 245
Query: 112 NAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTP 171
+ P+TDGID DSS N+ IE+C ++ DD + +KSG D G+ + RP+ N++VR +
Sbjct: 246 HGPSTDGIDIDSSCNILIENCDVDCNDDNICIKSGRDADGLRVNRPTENVVVRNCTAR-- 303
Query: 172 TCSGVGI---GSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERV 228
G G+ GSE SG I NV L +R+K+ RGG IENI + + E V
Sbjct: 304 --KGAGLITCGSETSGSIRNVLGYDLKAVGTYTVLRLKSAMNRGGTIENIYMTRVSAENV 361
Query: 229 K 229
+
Sbjct: 362 R 362
>gi|256424869|ref|YP_003125522.1| glycoside hydrolase [Chitinophaga pinensis DSM 2588]
gi|256039777|gb|ACU63321.1| glycoside hydrolase family 28 [Chitinophaga pinensis DSM 2588]
Length = 521
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 90/159 (56%), Gaps = 2/159 (1%)
Query: 68 LVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNV 127
V +N N+ + L N+PFW I P+YC NV+I+G+T+ + + P+ DGID +SS NV
Sbjct: 209 FVSAVNCKNVYLEGLQLENTPFWNIVPIYCDNVIIRGITVNS-VGIPSGDGIDIESSKNV 267
Query: 128 CIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIF 187
IE C + GDD +K+G G+ + +P+ N+++ R S G+ +GSE + I
Sbjct: 268 LIEYCTLNCGDDCFTLKAGRGEDGLRIGKPTENVVI-RYSLARQGHGGITVGSETAAMIR 326
Query: 188 NVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKME 226
N+ V + D G+R KT + RGG EN+ I+M
Sbjct: 327 NLYVHDVVFDDTEVGLRFKTRRPRGGGGENLHYERIRMR 365
>gi|383114418|ref|ZP_09935182.1| hypothetical protein BSGG_1410 [Bacteroides sp. D2]
gi|313693875|gb|EFS30710.1| hypothetical protein BSGG_1410 [Bacteroides sp. D2]
Length = 487
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 119/244 (48%), Gaps = 41/244 (16%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWW---------------NRTLKHTRGHLVELMNSNNILI 79
N +TG G ID +G+++WD +W + K RG LV NS +I +
Sbjct: 150 NAALTG-EGFIDCRGKVFWDKYWAMREDYEKKNLRWIVDYDCKRVRGVLVS--NSKHITL 206
Query: 80 SNLTFRNSPFWTIHPVYCRNVVIKGMTILAPL--NAPNTDGIDPDSSTNVCIEDCYIESG 137
+ T + FW +Y + + G+TI + + P+TDGID DSSTN+ IE+C ++
Sbjct: 207 KDFTLVRTGFWACQILYSDHCSVSGLTINNNVGGHGPSTDGIDIDSSTNILIENCDVDCN 266
Query: 138 DDLVAVKSGWDHYGIAMARPSSNIIVR----RVSGTTPTCSGVGIGSEMSGGIFNVTVDQ 193
DD + +K+G D G+ + RP+ N++VR R TC GSE SG I NV
Sbjct: 267 DDNICIKAGRDADGLRVNRPTENVVVRNCIARKGAGLLTC-----GSETSGSIRNVLAHD 321
Query: 194 LHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDPK---- 249
L + +R+K+ RGG +ENI + + + + + + D W+PK
Sbjct: 322 LTAYGTGTTLRLKSSMNRGGTVENIYMTRVVADSITHILSV--------DLNWNPKYSYS 373
Query: 250 ALPK 253
LPK
Sbjct: 374 TLPK 377
>gi|238916395|ref|YP_002929912.1| glycoside hydrolase family 28-like polygalacturonase [Eubacterium
eligens ATCC 27750]
gi|238871755|gb|ACR71465.1| Glycoside Hydrolase Family 28-like polygalacturonase [Eubacterium
eligens ATCC 27750]
Length = 458
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/335 (30%), Positives = 149/335 (44%), Gaps = 66/335 (19%)
Query: 1 MDEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMW-------- 52
+D++P+I + +Y G+E + R S I ++ N+ ITG G IDG G MW
Sbjct: 91 IDQYPLI--ITNY-EGQECI--RAKSPITAENAINIGITG-GGVIDGSGDMWRPIKQFKI 144
Query: 53 WDLWWNRTLKHT--------------------------------------------RGHL 68
D W +K + R +
Sbjct: 145 TDRQWEALMKKSQYIIDTKGGGIWMPTESSFKGNEHNIQLDAENALEKASEYYDFYRPVM 204
Query: 69 VELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVC 128
V L + IL+ +TF+NSP W IHP +C+N+ ++ +T+ P A N DGID +S V
Sbjct: 205 VSLRHCKRILLDGVTFKNSPAWNIHPFFCKNLTVRNVTVSNPYYAQNGDGIDVESCKKVH 264
Query: 129 IEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFN 188
I +C E+GDD + +KSG + + P ++ + G IGSEMS GI N
Sbjct: 265 IHNCTFETGDDAICLKSGKNAVARQIEGPCEDVYIHDCL-VNEGHGGFVIGSEMSRGIKN 323
Query: 189 VTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVK---IPIRISRGSN----DH 241
V V+ GVRIK+ GRGG IENI I+NI M +K I + +S N D
Sbjct: 324 VLVENCTFLGTDVGVRIKSALGRGGVIENINIKNINMVDIKEQAIILTMSYVLNSLNRDE 383
Query: 242 PDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGI 276
G D +P + I+F + + +A V+ I
Sbjct: 384 EINGIDKDDIPYFKNINFEGINCLGAKEAVVIEPI 418
>gi|221200600|ref|ZP_03573641.1| glycoside hydrolase, family 28 [Burkholderia multivorans CGD2M]
gi|221208427|ref|ZP_03581429.1| glycoside hydrolase, family 28 [Burkholderia multivorans CGD2]
gi|221171615|gb|EEE04060.1| glycoside hydrolase, family 28 [Burkholderia multivorans CGD2]
gi|221179172|gb|EEE11578.1| glycoside hydrolase, family 28 [Burkholderia multivorans CGD2M]
Length = 665
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 93/173 (53%), Gaps = 18/173 (10%)
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+ R +VE + N+L+ N +N+PFW HP CRNVVI+G+T + PN DG DPD
Sbjct: 333 YLRPCMVEFIGCTNVLMENYQTQNTPFWQHHPTACRNVVIRGVTTNS--IGPNNDGFDPD 390
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWD---HYGIAMARPSSNIIVRRVSGTTPTCSGVGIG 179
+ T+V EDC +GDD +A+KSG + YG A N + G G+ +G
Sbjct: 391 ACTDVLCEDCTFNTGDDCIAIKSGKNRDTEYGPAKRHLVRNCTMNSGHG------GITLG 444
Query: 180 SEMSGGIFNVTVDQLHVWDA-------AAGVRIKTDKGRGGYIENITIRNIKM 225
SEM GG+ + L + +A +R+KT+ RGGY+++ ++ + +
Sbjct: 445 SEMGGGVEQIYATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVSL 497
>gi|421478826|ref|ZP_15926555.1| polygalacturonase domain protein [Burkholderia multivorans CF2]
gi|400223986|gb|EJO54252.1| polygalacturonase domain protein [Burkholderia multivorans CF2]
Length = 665
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 93/173 (53%), Gaps = 18/173 (10%)
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+ R +VE + N+L+ N +N+PFW HP CRNVVI+G+T + PN DG DPD
Sbjct: 333 YLRPCMVEFIGCTNVLMENYQTQNTPFWQHHPTACRNVVIRGVTTNS--IGPNNDGFDPD 390
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWD---HYGIAMARPSSNIIVRRVSGTTPTCSGVGIG 179
+ T+V EDC +GDD +A+KSG + YG A N + G G+ +G
Sbjct: 391 ACTDVLCEDCTFNTGDDCIAIKSGKNRDTEYGPAKRHLVRNCTMNSGHG------GITLG 444
Query: 180 SEMSGGIFNVTVDQLHVWDA-------AAGVRIKTDKGRGGYIENITIRNIKM 225
SEM GG+ + L + +A +R+KT+ RGGY+++ ++ + +
Sbjct: 445 SEMGGGVEQIYATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVSL 497
>gi|421472155|ref|ZP_15920382.1| polygalacturonase domain protein, partial [Burkholderia multivorans
ATCC BAA-247]
gi|400223840|gb|EJO54116.1| polygalacturonase domain protein, partial [Burkholderia multivorans
ATCC BAA-247]
Length = 615
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 93/173 (53%), Gaps = 18/173 (10%)
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+ R +VE + N+L+ N +N+PFW HP CRNVVI+G+T + PN DG DPD
Sbjct: 283 YLRPCMVEFIGCTNVLMENYQTQNTPFWQHHPTACRNVVIRGVTTNS--IGPNNDGFDPD 340
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWD---HYGIAMARPSSNIIVRRVSGTTPTCSGVGIG 179
+ T+V EDC +GDD +A+KSG + YG A N + G G+ +G
Sbjct: 341 ACTDVLCEDCTFNTGDDCIAIKSGKNRDTEYGPAKRHLVRNCTMNSGHG------GITLG 394
Query: 180 SEMSGGIFNVTVDQLHVWDA-------AAGVRIKTDKGRGGYIENITIRNIKM 225
SEM GG+ + L + +A +R+KT+ RGGY+++ ++ + +
Sbjct: 395 SEMGGGVEQIYATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVSL 447
>gi|161519770|ref|YP_001583197.1| glycoside hydrolase family protein [Burkholderia multivorans ATCC
17616]
gi|189354051|ref|YP_001949678.1| endopolygalacturonase [Burkholderia multivorans ATCC 17616]
gi|160343820|gb|ABX16905.1| glycoside hydrolase family 28 [Burkholderia multivorans ATCC 17616]
gi|189338073|dbj|BAG47142.1| endopolygalacturonase [Burkholderia multivorans ATCC 17616]
Length = 665
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 93/173 (53%), Gaps = 18/173 (10%)
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+ R +VE + N+L+ N +N+PFW HP CRNVVI+G+T + PN DG DPD
Sbjct: 333 YLRPCMVEFIGCTNVLMENYQTQNTPFWQHHPTACRNVVIRGVTTNS--IGPNNDGFDPD 390
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWD---HYGIAMARPSSNIIVRRVSGTTPTCSGVGIG 179
+ T+V EDC +GDD +A+KSG + YG A N + G G+ +G
Sbjct: 391 ACTDVLCEDCTFNTGDDCIAIKSGKNRDTEYGPAKRHLVRNCTMNSGHG------GITLG 444
Query: 180 SEMSGGIFNVTVDQLHVWDA-------AAGVRIKTDKGRGGYIENITIRNIKM 225
SEM GG+ + L + +A +R+KT+ RGGY+++ ++ + +
Sbjct: 445 SEMGGGVEQIYATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVSL 497
>gi|379720205|ref|YP_005312336.1| hypothetical protein PM3016_2299 [Paenibacillus mucilaginosus 3016]
gi|378568877|gb|AFC29187.1| hypothetical protein PM3016_2299 [Paenibacillus mucilaginosus 3016]
Length = 518
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/321 (29%), Positives = 147/321 (45%), Gaps = 39/321 (12%)
Query: 2 DEWPIIDPLPSYGRGRERLGGRHISLIHGD-----HLTNVIITGYNGTIDGQGQMWWDLW 56
D++P+ + GRE+L + SLI+ L +II G G ID G +
Sbjct: 168 DDYPV---MQYRWEGREQLC--YASLINTKDPAEGRLEQIIIEG-EGKIDANGMALFHKE 221
Query: 57 WNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAP-- 114
K RG V L N + + + ++T R SP W +H +YC V + + I +
Sbjct: 222 MAEK-KGFRGRAVCLRNVDGVYLKDITVRQSPAWCVHLIYCNGVSVNHVEIHTKKDERGR 280
Query: 115 ------NTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSG 168
N DG++PDS+++V I + I S DD +A+KSG + G + PS NI R+S
Sbjct: 281 RYEHIFNGDGLNPDSTSDVYIFNSMIASQDDCIAIKSGRNEEGRRVGIPSQNI---RISN 337
Query: 169 TT-PTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMER 227
+ GV GSEMSGG+ NV + D + IK +GRG IEN+T+ + +
Sbjct: 338 CIFKSGFGVATGSEMSGGVRNVRISDCRFEDVYSIATIKAPRGRGAVIENVTVEDCTLTN 397
Query: 228 VKIP---IRISRGS------NDHPDEGWDP-----KALPKIRGISFVNVV-SVNTTKAPV 272
+ R RG+ H D D + IR I N+V + A
Sbjct: 398 YSLEHEDCRWFRGAINIDQFYSHADFDADKVEEVDEGTSVIRNIHLKNIVLDTHAGNAVF 457
Query: 273 LAGIIGTQFEEICMKNVSLLG 293
+AG+ + + I ++NV+ LG
Sbjct: 458 MAGLPESPLQNIRLENVNALG 478
>gi|383316410|ref|YP_005377252.1| endopolygalacturonase [Frateuria aurantia DSM 6220]
gi|379043514|gb|AFC85570.1| endopolygalacturonase [Frateuria aurantia DSM 6220]
Length = 784
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 137/272 (50%), Gaps = 34/272 (12%)
Query: 14 GRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQG--------QMWWDLWWNRTLKHTR 65
GR R GG +LI DH + + G G +DGQG + WW L +H
Sbjct: 133 GRNTARGGGCR-ALISLDHGHDQGVYG-EGVVDGQGGQSMQGRAESWWQLARRAQHEHME 190
Query: 66 GH---LVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+ L+++ S++I++ +T RN+P + + GM I P +A NTDGIDP
Sbjct: 191 ENAPRLIQIRRSHDIVLEGITLRNAPNFHVSVSQTDGFTGWGMLIDTPGDARNTDGIDPA 250
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SS++V + +I +GDD VA+K+G PS +I + + G+ IGSE+
Sbjct: 251 SSSHVLLAHNWINTGDDNVAIKAG-------TTGPSRDITI--IHNHFYQGHGLSIGSEV 301
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
G+ +V VD L + G+RIK+D+ RGG + +I+ ++ M V+ P+ +
Sbjct: 302 QSGVSDVHVDDLSLDGTTNGLRIKSDRSRGGLVSDISYAHVCMRHVRWPLVL-------- 353
Query: 243 DEGWDPK----ALPKIRGISFVNVVSVNTTKA 270
D ++P+ ALP+ R I F ++ ++ +A
Sbjct: 354 DTLYNPRAEGDALPEFRDIRFSHIHALEGGQA 385
>gi|323452523|gb|EGB08397.1| hypothetical protein AURANDRAFT_26417 [Aureococcus anophagefferens]
Length = 460
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 93/157 (59%), Gaps = 1/157 (0%)
Query: 68 LVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNV 127
V+ + ++N + N+PFW +HPVY NV ++ + + + PNTDG+DP++ +V
Sbjct: 190 FVQPFRCRRVSLANFSLVNAPFWAVHPVYSENVWVRNLRVNTSWDRPNTDGVDPEACKDV 249
Query: 128 CIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIF 187
+E+C I +GDD VA+K+G D G + S NI+VRR + +G+ +GSE+SGG+
Sbjct: 250 LVENCVISAGDDAVALKTGRDADGWRVGVASENIVVRR-NVLASRFNGICVGSEVSGGVD 308
Query: 188 NVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIK 224
NV + + A + +K++ RG ++ + + ++K
Sbjct: 309 NVFFLENRIERAFHAIFVKSNSERGSFVRYVHVAHVK 345
>gi|150002789|ref|YP_001297533.1| glycoside hydrolase [Bacteroides vulgatus ATCC 8482]
gi|149931213|gb|ABR37911.1| glycoside hydrolase family 28 [Bacteroides vulgatus ATCC 8482]
Length = 494
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 112/216 (51%), Gaps = 29/216 (13%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWW-------NRTL--------KHTRGHLVELMNSNNILI 79
N I+G GT+D +G+++WD +W R L K RG L+ NS +I +
Sbjct: 152 NAAISGA-GTLDCRGKIFWDKYWTMRKDYEKRKLRWIVDYDCKRVRGMLIS--NSRHITL 208
Query: 80 SNLTFRNSPFWTIHPVYCRNVVIKGMTILAPL--NAPNTDGIDPDSSTNVCIEDCYIESG 137
+ T + FW +Y + G+ I + + P+TDGID DSSTN+ IE+C ++
Sbjct: 209 KDFTLMRTGFWGCQVLYSDQCTLNGLKINNNIGGHGPSTDGIDIDSSTNILIENCEVDCN 268
Query: 138 DDLVAVKSGWDHYGIAMARPSSNIIVR----RVSGTTPTCSGVGIGSEMSGGIFNVTVDQ 193
DD + +K+G D G+ + RP+ NIIVR R TC GSE SG I NV
Sbjct: 269 DDNICLKAGRDADGLRVNRPTENIIVRGCIARKGAGLITC-----GSETSGCIRNVLGYN 323
Query: 194 LHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVK 229
L + ++ +R+K+ RGG +ENI + + + V+
Sbjct: 324 LQAYGTSSTLRLKSAMNRGGTVENIYMTQVTADHVR 359
>gi|423315477|ref|ZP_17293405.1| hypothetical protein HMPREF1058_04017 [Bacteroides vulgatus
CL09T03C04]
gi|392679280|gb|EIY72666.1| hypothetical protein HMPREF1058_04017 [Bacteroides vulgatus
CL09T03C04]
Length = 494
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 112/216 (51%), Gaps = 29/216 (13%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWW-------NRTL--------KHTRGHLVELMNSNNILI 79
N I+G GT+D +G+++WD +W R L K RG L+ NS +I +
Sbjct: 152 NAAISGA-GTLDCRGKIFWDKYWTMRKDYEKRKLRWIVDYDCKRVRGMLIS--NSRHITL 208
Query: 80 SNLTFRNSPFWTIHPVYCRNVVIKGMTILAPL--NAPNTDGIDPDSSTNVCIEDCYIESG 137
+ T + FW +Y + G+ I + + P+TDGID DSSTN+ IE+C ++
Sbjct: 209 KDFTLMRTGFWGCQVLYSDQCTLNGLKINNNVGGHGPSTDGIDIDSSTNILIENCEVDCN 268
Query: 138 DDLVAVKSGWDHYGIAMARPSSNIIVR----RVSGTTPTCSGVGIGSEMSGGIFNVTVDQ 193
DD + +K+G D G+ + RP+ NIIVR R TC GSE SG I NV
Sbjct: 269 DDNICLKAGRDADGLRVNRPTENIIVRGCIARKGAGLITC-----GSETSGCIRNVLGYN 323
Query: 194 LHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVK 229
L + ++ +R+K+ RGG +ENI + + + V+
Sbjct: 324 LQAYGTSSTLRLKSAMNRGGTVENIYMTQVTADHVR 359
>gi|160943445|ref|ZP_02090679.1| hypothetical protein FAEPRAM212_00936 [Faecalibacterium prausnitzii
M21/2]
gi|158445305|gb|EDP22308.1| polygalacturonase (pectinase) [Faecalibacterium prausnitzii M21/2]
Length = 457
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 141/294 (47%), Gaps = 39/294 (13%)
Query: 26 SLIHGDHLTNVIITGYNGTIDGQGQMWWD----LWWNRTLKHTRGHLVELMNSNNILISN 81
+ IH N ITG G +DG + ++N + R +V + + N+I +
Sbjct: 104 TFIHAKDADNFSITG-QGAVDGNVYAFMKRASRYYFNGDF-YPRPTMVYVEHCNHISFHD 161
Query: 82 LTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLV 141
+T +NSPFWT+HP C +V+I + +L PL+ N+DGIDPD STNV I C+++ DD +
Sbjct: 162 VTLQNSPFWTLHPAGCNDVLISNIRVLNPLDCTNSDGIDPDHSTNVRIIGCHVQCADDCI 221
Query: 142 AVK--SGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDA 199
+K +G + YG P+ N+I+ + T T + + IG+E N+ VD + +
Sbjct: 222 CLKTTAGNNEYG-----PTKNVIISNCT-LTSTSAAIKIGTEGVADFENILVDNCIITGS 275
Query: 200 AAGVRIKTDKGRGGYIENITIRNIKMERVKI---------PIRIS---RGSNDHPDEGWD 247
G+ I+ GG + N++ NI +E + PI ++ R +N H
Sbjct: 276 NRGLSIQIRD--GGCVRNVSFSNIMIETRRFAECWWGCAEPIVMTTHDRNANTHSG---- 329
Query: 248 PKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQ 301
I + F N V+ L+G + + +NV++ L ++KW+
Sbjct: 330 -----SIENVRFFN-VTCKGENGVFLSGNEENHIKNVLFENVNVC-LEATSKWE 376
>gi|253688511|ref|YP_003017701.1| glycoside hydrolase family protein [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|251755089|gb|ACT13165.1| glycoside hydrolase family 28 [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 437
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 96/321 (29%), Positives = 145/321 (45%), Gaps = 44/321 (13%)
Query: 26 SLIHGDHLTNVIITGYNGTIDGQGQM-WWDLWWN--RTLKH------------------- 63
+ I + N+ I G G IDGQGQ WW L LKH
Sbjct: 106 AFILAKDVKNIAIAG-PGVIDGQGQQRWWPLATEARNHLKHGDTNWFTQHYPGIPTANGM 164
Query: 64 TRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDS 123
R L+E N + IS + NSP W + ++ + TI P ++PNTDGID S
Sbjct: 165 PRPWLIEFANVSQGKISGIGIENSPMWNLVIRDSHHIEVTNSTITNPSDSPNTDGIDIIS 224
Query: 124 STNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMS 183
S V + I +GDD ++VKSG A S +I + + + G+ IGSE
Sbjct: 225 SRQVHLHHLNISTGDDNISVKSGLAKR--ADDAESRDITIDHIQ--SENGHGISIGSETI 280
Query: 184 GGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISR---GSND 240
GI VT+ LH GVRIK+ + RG I + IRN+ M++VK P+ I+ G+
Sbjct: 281 NGIGKVTLQDLHFTGTENGVRIKSGRDRGANIGPVIIRNVTMQQVKTPLVITDSYGGNGG 340
Query: 241 HPDEGWDP-------KALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLG 293
+ + P P I ++ ++ + T A +++G+ E +KN+ L
Sbjct: 341 YSSDSVSPIKYQTLTTTTPNIHDVTLQHIEASGATHAGIISGL-----PEAPLKNIHLES 395
Query: 294 LAPSAK--WQCQFVSGFTSQV 312
+ +AK Q ++V G+ QV
Sbjct: 396 VHITAKTGLQSRYVLGWQKQV 416
>gi|374376177|ref|ZP_09633835.1| Polygalacturonase [Niabella soli DSM 19437]
gi|373233017|gb|EHP52812.1| Polygalacturonase [Niabella soli DSM 19437]
Length = 437
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 137/299 (45%), Gaps = 48/299 (16%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKHTRGHLVELMNSNNILISNLTFRN 86
I G L +V ITG +GTIDGQG WW + ++ +K R ++ L N +LI +T N
Sbjct: 119 FISGSKLHDVAITG-SGTIDGQGAPWWPAYKDKGVKRPR--MIALQNCERLLIRGVTLMN 175
Query: 87 SPFW--TIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVC--------IEDCYIES 136
+P + I NV + +T+ AP + D ++P +T+ C I+DC I +
Sbjct: 176 APMFHIAISGKATNNVTVDKVTVRAP---ASDDPLNPSHNTDACDVSGNKILIKDCDIST 232
Query: 137 GDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHV 196
GDD G +SN+ ++ G+ IGS GG+ N ++
Sbjct: 233 GDDNFTCGGG-----------TSNVHIQNCK--YGYGHGLSIGSYTKGGVSNFLIEDCSF 279
Query: 197 WDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPDE------------ 244
+ G+RIK+D+ RGG ++N+T RNIKME V +PI I E
Sbjct: 280 TNTECGIRIKSDRDRGGVVQNLTYRNIKMENVGMPILIYGAYMAKEKEFRNLQKITPEIA 339
Query: 245 -GWDPKAL----PKIRGISFVNVVSV--NTTKAPVLAGIIGTQFEEICMKNVSLLGLAP 296
G+ + L P + I+F N+ + N +A ++ G+ I K V++ AP
Sbjct: 340 AGYAREPLTDLTPVYKDITFENITATTQNGKRAGLIWGLPEAPASNIVFKKVTITASAP 398
>gi|237710960|ref|ZP_04541441.1| glycoside hydrolase [Bacteroides sp. 9_1_42FAA]
gi|265750548|ref|ZP_06086611.1| glycoside hydrolase, family 28 [Bacteroides sp. 3_1_33FAA]
gi|229454804|gb|EEO60525.1| glycoside hydrolase [Bacteroides sp. 9_1_42FAA]
gi|263237444|gb|EEZ22894.1| glycoside hydrolase, family 28 [Bacteroides sp. 3_1_33FAA]
Length = 443
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 121/256 (47%), Gaps = 33/256 (12%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLW---------WNRTLKHT------------- 64
I+G L NV I G G IDG + W +R + H
Sbjct: 120 FIYGYQLENVSIIG-KGVIDGNAGTTFATWKSKQKIGQQLSREMNHKEVPVAERNFGEGY 178
Query: 65 --RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
R HLV+ + NI I ++ N+PFW IH + N++ +G+ A L N DGIDP+
Sbjct: 179 WLRPHLVQFFDCKNITIEDVFITNAPFWCIHLLKSENIICRGIRYDAKL--VNNDGIDPE 236
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
+ N+ IE+ +GDD VA+K G D+ G + PS NII+R GV +GSEM
Sbjct: 237 YTRNLLIENIEFNNGDDNVAIKCGRDNDGWKTSCPSENIIIRNCK--FKGLHGVVLGSEM 294
Query: 183 SGGIFNVTVDQL-HVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDH 241
S GI +V V+ + G+ IKT+ RGG+I +I + N + V+ + ++ +
Sbjct: 295 SSGIQHVFVENCTYGGYCKRGIFIKTNPDRGGFIRDIYVNNCEFGEVEDLFYV---TSMY 351
Query: 242 PDEGWDPKALPKIRGI 257
EG D ++ I
Sbjct: 352 AGEGMDNHHFTEVHDI 367
>gi|294777281|ref|ZP_06742736.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|294448901|gb|EFG17446.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 494
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 112/216 (51%), Gaps = 29/216 (13%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWW-------NRTL--------KHTRGHLVELMNSNNILI 79
N I+G GT+D +G+++WD +W R L K RG L+ NS +I +
Sbjct: 152 NAAISGA-GTLDCRGKIFWDKYWTMRKDYEKRKLRWIVDYDCKRVRGMLIS--NSRHITL 208
Query: 80 SNLTFRNSPFWTIHPVYCRNVVIKGMTILAPL--NAPNTDGIDPDSSTNVCIEDCYIESG 137
+ T + FW +Y + G+ I + + P+TDGID DSSTN+ IE+C ++
Sbjct: 209 KDFTLMRTGFWGCQVLYSDQCTLNGLKINNNVGGHGPSTDGIDIDSSTNILIENCEVDCN 268
Query: 138 DDLVAVKSGWDHYGIAMARPSSNIIVR----RVSGTTPTCSGVGIGSEMSGGIFNVTVDQ 193
DD + +K+G D G+ + RP+ NIIVR R TC GSE SG I NV
Sbjct: 269 DDNICLKAGRDADGLRVNRPTENIIVRGCIARKGAGLITC-----GSETSGCIRNVLGYN 323
Query: 194 LHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVK 229
L + ++ +R+K+ RGG +ENI + + + V+
Sbjct: 324 LQAYGTSSTLRLKSAMNRGGTVENIYMTQVTADHVR 359
>gi|237712634|ref|ZP_04543115.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|423228996|ref|ZP_17215401.1| hypothetical protein HMPREF1063_01221 [Bacteroides dorei
CL02T00C15]
gi|423244835|ref|ZP_17225909.1| hypothetical protein HMPREF1064_02115 [Bacteroides dorei
CL02T12C06]
gi|229453955|gb|EEO59676.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|392634749|gb|EIY28661.1| hypothetical protein HMPREF1063_01221 [Bacteroides dorei
CL02T00C15]
gi|392641222|gb|EIY35006.1| hypothetical protein HMPREF1064_02115 [Bacteroides dorei
CL02T12C06]
Length = 494
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 112/216 (51%), Gaps = 29/216 (13%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWW-------NRTL--------KHTRGHLVELMNSNNILI 79
N I+G GT+D +G+++WD +W R L K RG L+ NS +I +
Sbjct: 152 NAAISGA-GTLDCRGKIFWDKYWTMRKDYEKRKLRWIVDYDCKRVRGMLIS--NSRHITL 208
Query: 80 SNLTFRNSPFWTIHPVYCRNVVIKGMTILAPL--NAPNTDGIDPDSSTNVCIEDCYIESG 137
+ T + FW +Y + G+ I + + P+TDGID DSSTN+ IE+C ++
Sbjct: 209 KDFTLMRTGFWGCQVLYSDQCTLNGLKINNNVGGHGPSTDGIDIDSSTNILIENCEVDCN 268
Query: 138 DDLVAVKSGWDHYGIAMARPSSNIIVR----RVSGTTPTCSGVGIGSEMSGGIFNVTVDQ 193
DD + +K+G D G+ + RP+ NIIVR R TC GSE SG I NV
Sbjct: 269 DDNICLKAGRDADGLRVNRPTENIIVRGCIARKGAGLITC-----GSETSGCIRNVLGYN 323
Query: 194 LHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVK 229
L + ++ +R+K+ RGG +ENI + + + V+
Sbjct: 324 LQAYGTSSTLRLKSAMNRGGTVENIYMTQVTADNVR 359
>gi|212690878|ref|ZP_03299006.1| hypothetical protein BACDOR_00366 [Bacteroides dorei DSM 17855]
gi|265752316|ref|ZP_06088109.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|345512460|ref|ZP_08791986.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|423239837|ref|ZP_17220952.1| hypothetical protein HMPREF1065_01575 [Bacteroides dorei
CL03T12C01]
gi|212666560|gb|EEB27132.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
gi|229438029|gb|EEO48106.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|263237108|gb|EEZ22578.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|392645462|gb|EIY39189.1| hypothetical protein HMPREF1065_01575 [Bacteroides dorei
CL03T12C01]
Length = 494
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 112/216 (51%), Gaps = 29/216 (13%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWW-------NRTL--------KHTRGHLVELMNSNNILI 79
N I+G GT+D +G+++WD +W R L K RG L+ NS +I +
Sbjct: 152 NAAISGA-GTLDCRGKIFWDKYWTMRKDYEKRKLRWIVDYDCKRVRGMLIS--NSRHITL 208
Query: 80 SNLTFRNSPFWTIHPVYCRNVVIKGMTILAPL--NAPNTDGIDPDSSTNVCIEDCYIESG 137
+ T + FW +Y + G+ I + + P+TDGID DSSTN+ IE+C ++
Sbjct: 209 KDFTLMRTGFWGCQVLYSDQCTLNGLKINNNVGGHGPSTDGIDIDSSTNILIENCEVDCN 268
Query: 138 DDLVAVKSGWDHYGIAMARPSSNIIVR----RVSGTTPTCSGVGIGSEMSGGIFNVTVDQ 193
DD + +K+G D G+ + RP+ NIIVR R TC GSE SG I NV
Sbjct: 269 DDNICLKAGRDADGLRVNRPTENIIVRGCIARKGAGLITC-----GSETSGCIRNVLGYN 323
Query: 194 LHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVK 229
L + ++ +R+K+ RGG +ENI + + + V+
Sbjct: 324 LQAYGTSSTLRLKSAMNRGGTVENIYMTQVTADNVR 359
>gi|330996084|ref|ZP_08319977.1| polygalacturonase [Paraprevotella xylaniphila YIT 11841]
gi|329573855|gb|EGG55436.1| polygalacturonase [Paraprevotella xylaniphila YIT 11841]
Length = 466
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 95/166 (57%), Gaps = 16/166 (9%)
Query: 65 RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSS 124
R HL+ L N+L+ + + R SPFWTIH C+ +++ + + A N N DGID + S
Sbjct: 207 RPHLIHLNRCRNVLLEDFSIRESPFWTIHLYMCKGGIVRRLDVKA--NGHNNDGIDLEMS 264
Query: 125 TNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRR---VSGTTPTCSGVGIGSE 181
+ IE+C + GDD V +KSG + + PS NI++R ++G T +GIGSE
Sbjct: 265 RDFLIENCTFDQGDDAVVIKSGRNRDAWRLDTPSENIVIRNCKILAGHTL----LGIGSE 320
Query: 182 MSGGIFNVTVDQLHVWDAAAGVR----IKTDKGRGGYIENITIRNI 223
+SGGI N+ +H D VR IKT+ RGG++ENI + +I
Sbjct: 321 LSGGIRNIF---MHHCDVLGSVRCLFFIKTNCRRGGFVENIHLEDI 363
>gi|212694769|ref|ZP_03302897.1| hypothetical protein BACDOR_04302 [Bacteroides dorei DSM 17855]
gi|345516118|ref|ZP_08795611.1| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
gi|423227933|ref|ZP_17214339.1| hypothetical protein HMPREF1063_00159 [Bacteroides dorei
CL02T00C15]
gi|423239066|ref|ZP_17220182.1| hypothetical protein HMPREF1065_00805 [Bacteroides dorei
CL03T12C01]
gi|423243193|ref|ZP_17224269.1| hypothetical protein HMPREF1064_00475 [Bacteroides dorei
CL02T12C06]
gi|212662623|gb|EEB23197.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
gi|345455530|gb|EEO44191.2| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
gi|392637680|gb|EIY31546.1| hypothetical protein HMPREF1063_00159 [Bacteroides dorei
CL02T00C15]
gi|392646068|gb|EIY39787.1| hypothetical protein HMPREF1064_00475 [Bacteroides dorei
CL02T12C06]
gi|392647477|gb|EIY41178.1| hypothetical protein HMPREF1065_00805 [Bacteroides dorei
CL03T12C01]
Length = 465
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 121/256 (47%), Gaps = 33/256 (12%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLW---------WNRTLKHT------------- 64
I+G L NV I G G IDG + W +R + H
Sbjct: 142 FIYGYQLENVSIIG-KGVIDGNAGTTFATWKSKQKIGQQLSREMNHKEVPVAERNFGEGY 200
Query: 65 --RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
R HLV+ + NI I ++ N+PFW IH + N++ +G+ A L N DGIDP+
Sbjct: 201 WLRPHLVQFFDCKNITIEDVFITNAPFWCIHLLKSENIICRGIRYDAKL--VNNDGIDPE 258
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
+ N+ IE+ +GDD VA+K G D+ G + PS NII+R GV +GSEM
Sbjct: 259 YTRNLLIENIEFNNGDDNVAIKCGRDNDGWKTSCPSENIIIRNCK--FKGLHGVVLGSEM 316
Query: 183 SGGIFNVTVDQL-HVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDH 241
S GI +V V+ + G+ IKT+ RGG+I +I + N + V+ + ++ +
Sbjct: 317 SSGIQHVFVENCTYGGYCKRGIFIKTNPDRGGFIRDIYVNNCEFGEVEDLFYV---TSMY 373
Query: 242 PDEGWDPKALPKIRGI 257
EG D ++ I
Sbjct: 374 AGEGMDNHHFTEVHDI 389
>gi|374983540|ref|YP_004959035.1| glycoside hydrolase family protein [Streptomyces bingchenggensis
BCW-1]
gi|297154192|gb|ADI03904.1| glycoside hydrolase family 28 [Streptomyces bingchenggensis BCW-1]
Length = 475
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 116/233 (49%), Gaps = 44/233 (18%)
Query: 35 NVIITGYNGTIDGQGQMW-WDLWW--------NRTL-------------------KHTRG 66
NV +TG GT+DGQ ++ W+ W+ +++L + R
Sbjct: 160 NVAVTG-PGTLDGQARLGPWESWYRTSGPQGPDQSLLRRMGSAGVPVAERVFGDGHYLRP 218
Query: 67 HLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTN 126
+V+ N+L+S LT + P WT+HPV NV ++ +T+ + L NTDG DP+ ++
Sbjct: 219 KMVQFYRCRNVLVSGLTIVDPPMWTVHPVLSTNVTVRDITVDSTLY--NTDGCDPECCSD 276
Query: 127 VCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVR--RVSGTTPTCSGVGIGSEMSG 184
V I C + DD VAVKSG D G + PS NI+VR R SG G+ +GSEMSG
Sbjct: 277 VLITGCRFNTNDDCVAVKSGRDEDGHRVGVPSRNIVVRDCRFSG---RWGGMTVGSEMSG 333
Query: 185 GIFNVTVDQLHV--------WDAAAGVRIKTDKGRGGYIENITIRNIKMERVK 229
G+ ++ + + + + +K K RGG I+ + IRN + V+
Sbjct: 334 GVRDIFAENCEINSPDFPGRYPVKHALYVKASKKRGGCIDGVHIRNFTGQNVE 386
>gi|221210443|ref|ZP_03583423.1| glycoside hydrolase, family 28 [Burkholderia multivorans CGD1]
gi|221169399|gb|EEE01866.1| glycoside hydrolase, family 28 [Burkholderia multivorans CGD1]
Length = 665
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 95/170 (55%), Gaps = 12/170 (7%)
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+ R +VE + N+L+ N +N+PFW HP CRNVVI+G+T + PN DG DPD
Sbjct: 333 YLRPCMVEFIGCTNVLMENYQTQNTPFWQHHPTACRNVVIRGVTTNS--IGPNNDGFDPD 390
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
+ T+V EDC +GDD +A+KSG + + P+ +VR + + G+ +GSEM
Sbjct: 391 ACTDVLCEDCTFNTGDDCIAIKSGKNR--DTESGPAKRHLVRNCTMNS-GHGGITLGSEM 447
Query: 183 SGGIFNVTVDQLHVWDA-------AAGVRIKTDKGRGGYIENITIRNIKM 225
GG+ V L + +A +R+KT+ RGGY+++ ++ + +
Sbjct: 448 GGGVEQVYATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVSL 497
>gi|319643143|ref|ZP_07997773.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345520565|ref|ZP_08799952.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|254835085|gb|EET15394.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|317385221|gb|EFV66170.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
Length = 494
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 111/216 (51%), Gaps = 29/216 (13%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWW-------NRTL--------KHTRGHLVELMNSNNILI 79
N I+G GT+D +G+++WD +W R L K RG L+ NS I +
Sbjct: 152 NAAISGA-GTLDCRGKIFWDKYWTMRKDYEKRKLRWIVDYDCKRVRGMLIS--NSRQITL 208
Query: 80 SNLTFRNSPFWTIHPVYCRNVVIKGMTILAPL--NAPNTDGIDPDSSTNVCIEDCYIESG 137
+ T + FW +Y + G+ I + + P+TDGID DSSTN+ IE+C ++
Sbjct: 209 KDFTLMRTGFWGCQVLYSDQCTLNGLKINNNVGGHGPSTDGIDIDSSTNILIENCEVDCN 268
Query: 138 DDLVAVKSGWDHYGIAMARPSSNIIVR----RVSGTTPTCSGVGIGSEMSGGIFNVTVDQ 193
DD + +K+G D G+ + RP+ NIIVR R TC GSE SG I NV
Sbjct: 269 DDNICLKAGRDADGLRVNRPTENIIVRGCIARKGAGLITC-----GSETSGCIRNVLGYN 323
Query: 194 LHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVK 229
L + ++ +R+K+ RGG +ENI + + + V+
Sbjct: 324 LQAYGTSSTLRLKSAMNRGGTVENIYMTQVTADHVR 359
>gi|420263796|ref|ZP_14766432.1| exo-poly-alpha-D-galacturonosidase [Enterococcus sp. C1]
gi|394769238|gb|EJF49101.1| exo-poly-alpha-D-galacturonosidase [Enterococcus sp. C1]
Length = 417
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 122/262 (46%), Gaps = 33/262 (12%)
Query: 10 LPSYGRGRERLGGRHI----SLIHGDHLTNVIITGYNGTIDGQGQMWWDLWW-------- 57
L Y R+ G ++ ++I+ H NV+I+G G +DG+G+ WW +W
Sbjct: 56 LADYPEVDNRVAGINMKWPAAMINVFHAENVMISG-KGKLDGRGETWWQTFWGTDEASGM 114
Query: 58 -------------NRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKG 104
+ K R LV S + I +++ S FW Y +++I G
Sbjct: 115 MADYAKKGLRWAADYDCKRPRNILV--YESQQVTIKDISSVQSGFWNTQITYSHHILIDG 172
Query: 105 MTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVR 164
+TI P+TDGID DS V I++ YI DD +++K+G +A R I ++
Sbjct: 173 ITIDNG-KGPSTDGIDIDSCEEVTIQNAYISCNDDNISIKAGRGAEALAQQRSCRKITIK 231
Query: 165 RVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIK 224
SG+ IGSE SGGI + + ++ AG RIK+ RGG+I +T ++
Sbjct: 232 DCQ--LGYGSGIAIGSETSGGIEEIKIQKVVFEQTGAGFRIKSANNRGGFIRKVTASDLT 289
Query: 225 MERVKIPIRISRGSNDHPDEGW 246
M+ V P + +N +PD +
Sbjct: 290 MKDVGFPFLLQ--TNWYPDYSY 309
>gi|325568852|ref|ZP_08145145.1| exo-poly-alpha-D-galacturonosidase [Enterococcus casseliflavus ATCC
12755]
gi|325157890|gb|EGC70046.1| exo-poly-alpha-D-galacturonosidase [Enterococcus casseliflavus ATCC
12755]
Length = 417
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 122/262 (46%), Gaps = 33/262 (12%)
Query: 10 LPSYGRGRERLGGRHI----SLIHGDHLTNVIITGYNGTIDGQGQMWWDLWW-------- 57
L Y R+ G ++ ++I+ H NV+I+G G +DG+G+ WW +W
Sbjct: 56 LADYPEVDNRVAGINMKWPAAMINVFHAENVMISG-KGKLDGRGETWWQTFWGTDEASGM 114
Query: 58 -------------NRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKG 104
+ K R LV S + I +++ S FW Y +++I G
Sbjct: 115 MADYTKKGLRWAADYDCKRPRNILV--YESQQVTIKDISSVQSGFWNTQITYSHHILIDG 172
Query: 105 MTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVR 164
+TI P+TDGID DS V I++ YI DD +++K+G +A R I ++
Sbjct: 173 ITIDNG-KGPSTDGIDIDSCEEVTIQNAYISCNDDNISIKAGRGAEALAQQRSCRKITIK 231
Query: 165 RVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIK 224
SG+ IGSE SGGI + + ++ AG RIK+ RGG+I +T ++
Sbjct: 232 DCQ--LGYGSGIAIGSETSGGIEEIKIQKVVFEQTGAGFRIKSANNRGGFIRKVTASDLT 289
Query: 225 MERVKIPIRISRGSNDHPDEGW 246
M+ V P + +N +PD +
Sbjct: 290 MKDVGFPFLLQ--TNWYPDYSY 309
>gi|295105134|emb|CBL02678.1| Endopolygalacturonase [Faecalibacterium prausnitzii SL3/3]
Length = 457
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 139/294 (47%), Gaps = 39/294 (13%)
Query: 26 SLIHGDHLTNVIITGYNGTIDGQGQMWWD----LWWNRTLKHTRGHLVELMNSNNILISN 81
+ IH N ITG G +DG + ++N + R +V + + N+I +
Sbjct: 104 TFIHAKDADNFSITG-QGAVDGNVYAFMKRASRYYFNGDF-YPRPTMVYVEHCNHISFHD 161
Query: 82 LTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLV 141
+T +NSPFWT+HP C +V+I + +L PL+ N+DGIDPD STNV I C+++ DD +
Sbjct: 162 VTLQNSPFWTLHPAGCNDVLISNIRVLNPLDCTNSDGIDPDHSTNVRIIGCHVQCADDCI 221
Query: 142 AVK--SGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDA 199
+K +G + YG P+ N+I+ + T T + + IG+E N+ VD +
Sbjct: 222 CLKTTAGNNEYG-----PTKNVIISNCT-LTSTSAAIKIGTEGVADFENILVDNCIITGT 275
Query: 200 AAGVRIKTDKGRGGYIENITIRNIKMERVKI---------PIRIS---RGSNDHPDEGWD 247
G+ I+ GG + N++ NI +E + PI ++ R +N H
Sbjct: 276 NRGLSIQIRD--GGCVRNVSFSNIMIETRRFAECWWGCAEPIVMTTHDRNANTHSG---- 329
Query: 248 PKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQ 301
I + F N V+ L+G + + +NV + L ++KW+
Sbjct: 330 -----SIENVRFFN-VTCKGENGVFLSGNEENHIKNVLFENVDVC-LEATSKWE 376
>gi|291459617|ref|ZP_06599007.1| polygalacturonase [Oribacterium sp. oral taxon 078 str. F0262]
gi|291417895|gb|EFE91614.1| polygalacturonase [Oribacterium sp. oral taxon 078 str. F0262]
Length = 526
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 106/214 (49%), Gaps = 9/214 (4%)
Query: 24 HISLIHGDHLTNVIITGYNGTIDGQGQM--WWDLWWNRTLKHT-RGHLVELMNSNNILIS 80
+ SL+ G L NV I G GT+DG WW+ ++T + R + L I I
Sbjct: 182 YASLLTGIELRNVDIFG-EGTVDGNADRSDWWE--EHKTKRGAWRPRTIFLCRCRCIRIQ 238
Query: 81 NLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDL 140
+ RNSP WTIHP Y + + +TI P ++PNTDG DP+S +V + C I GDD
Sbjct: 239 GVLVRNSPSWTIHPYYTDGISLYNVTIWNPPDSPNTDGFDPESCEDVLLLGCRISVGDDC 298
Query: 141 VAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAA 200
+A+KSG + S N +R S + IGSE + G++ V
Sbjct: 299 IAIKSGKARMAGERRKASRNFALRN-SILERGHGALTIGSEAAAGVYRVEASLCIFSGTD 357
Query: 201 AGVRIKTDKGRG--GYIENITIRNIKMERVKIPI 232
G+R+KT +GRG + + I +I+ME V +P
Sbjct: 358 RGLRLKTRRGRGPDCFYDEIYFHHIRMENVPMPF 391
>gi|380693875|ref|ZP_09858734.1| exo-poly-alpha-D-galacturonosidase [Bacteroides faecis MAJ27]
Length = 506
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 120/240 (50%), Gaps = 31/240 (12%)
Query: 13 YGRGRERLGGRHI----SLIHGDHLTNVIITGYNGTIDGQGQMWWDLWW----------- 57
Y R R+ G + ++I+ N ++G GT+D +G+++WD +W
Sbjct: 129 YPEFRSRIAGIEMTWPAAVINIVDEKNAAVSG-EGTLDCRGKVFWDKYWEMRKEYVAKGL 187
Query: 58 ----NRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPL-- 111
+ K RG LVE S++I +S T + FW +Y I G+TI +
Sbjct: 188 RWIVDYDCKRVRGILVE--RSSDITLSGFTLMRTGFWGCQILYSDYCTIDGLTINNNIGG 245
Query: 112 NAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTP 171
+ P+TDGID DSS N+ IE+C ++ DD + +KSG D G+ + RP+ N++VR +
Sbjct: 246 HGPSTDGIDIDSSCNILIENCDVDCNDDNICIKSGRDADGLRVNRPTENVVVRNCTAR-- 303
Query: 172 TCSGVGI---GSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERV 228
G G+ GSE SG I N+ L + +R+K+ RGG IENI + + E +
Sbjct: 304 --KGAGLITCGSETSGSIRNILGYDLKAVGTSTVLRLKSAMNRGGTIENIYMTRVSAENI 361
>gi|293370061|ref|ZP_06616627.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|299148453|ref|ZP_07041515.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
gi|423288960|ref|ZP_17267811.1| parallel beta-helix [Bacteroides ovatus CL02T12C04]
gi|292634853|gb|EFF53376.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|298513214|gb|EFI37101.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
gi|392668724|gb|EIY62218.1| parallel beta-helix [Bacteroides ovatus CL02T12C04]
Length = 511
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 124/250 (49%), Gaps = 36/250 (14%)
Query: 5 PIIDPLPSYGRGRERLGGRHI----SLIHGDHLTNVIITGYNGTIDGQGQMWWDLWW--- 57
P I P + R R+ G + ++I+ + N ++G GT+D +G+++WD +W
Sbjct: 129 PYIHHYPEF---RSRIAGIEMTWPAAVINIVNEKNASVSG-EGTLDCRGKVFWDKYWEMR 184
Query: 58 ------------NRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGM 105
+ K RG L+E S++I + T + FW +Y I G+
Sbjct: 185 KEYEAKGLRWIVDYDCKRVRGILIE--RSSDITLKGFTLMRTGFWGCQILYSDYCTIDGL 242
Query: 106 TILAPL--NAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIV 163
TI + + P+TDGID DSS N+ +E+C ++ DD + +KSG D G+ + P+ N+++
Sbjct: 243 TINNNIGGHGPSTDGIDIDSSCNILVENCDVDCNDDNICIKSGRDADGLRVNLPTENVVI 302
Query: 164 R----RVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENIT 219
R R TC GSE SG I NV L +A +R+K+ RGG IENI
Sbjct: 303 RNCIARKGAGLITC-----GSETSGSIRNVLGYNLEAIGTSAVLRLKSAMNRGGTIENIY 357
Query: 220 IRNIKMERVK 229
+ +K E V+
Sbjct: 358 MTEVKAENVR 367
>gi|294776431|ref|ZP_06741909.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|294449757|gb|EFG18279.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 424
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 93/170 (54%), Gaps = 7/170 (4%)
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
H R HL+ N+L+ R SPFWTIH C +++ + + A + N DGID +
Sbjct: 166 HLRPHLIHFNRCKNVLLDEFKIRQSPFWTIHLYMCDGGIVRNLDVKA--HGHNNDGIDLE 223
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S N IE+C + GDD V +K+G + + P NI++R + + +GIGSEM
Sbjct: 224 MSRNFLIENCVFDQGDDAVVIKAGRNQNAWRLNTPCENIVIRHCN-ILKGHTLLGIGSEM 282
Query: 183 SGGIFNVTVDQLHVWDAAAGVRI-KTDKGRGGYIENITIRNI---KMERV 228
SGG+ NV + D+ + KT+ RGG+IENI ++N+ KM+RV
Sbjct: 283 SGGVRNVYMHNCTAPDSVFRLFFAKTNHRRGGFIENIWMKNVKAGKMQRV 332
>gi|383114377|ref|ZP_09935141.1| parallel beta-helix [Bacteroides sp. D2]
gi|313693916|gb|EFS30751.1| parallel beta-helix [Bacteroides sp. D2]
Length = 511
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 124/250 (49%), Gaps = 36/250 (14%)
Query: 5 PIIDPLPSYGRGRERLGGRHI----SLIHGDHLTNVIITGYNGTIDGQGQMWWDLWW--- 57
P I P + R R+ G + ++I+ + N ++G GT+D +G+++WD +W
Sbjct: 129 PYIHHYPEF---RSRIAGIEMTWPAAVINIVNEKNASVSG-EGTLDCRGKVFWDKYWEMR 184
Query: 58 ------------NRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGM 105
+ K RG L+E S++I + T + FW +Y I G+
Sbjct: 185 KEYEAKGLRWIVDYDCKRVRGILIE--RSSDITLKGFTLMRTGFWGCQILYSDYCTIDGL 242
Query: 106 TILAPL--NAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIV 163
TI + + P+TDGID DSS N+ +E+C ++ DD + +KSG D G+ + P+ N+++
Sbjct: 243 TINNNIGGHGPSTDGIDIDSSCNILVENCDVDCNDDNICIKSGRDADGLRVNLPTENVVI 302
Query: 164 R----RVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENIT 219
R R TC GSE SG I NV L +A +R+K+ RGG IENI
Sbjct: 303 RNCIARKGAGLITC-----GSETSGSIRNVLGYNLEAIGTSAVLRLKSAMNRGGTIENIY 357
Query: 220 IRNIKMERVK 229
+ +K E V+
Sbjct: 358 MTEVKAENVR 367
>gi|197210953|gb|ACH48398.1| polygalacturonase [Pectobacterium carotovorum]
Length = 402
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 100/293 (34%), Positives = 139/293 (47%), Gaps = 34/293 (11%)
Query: 26 SLIHGDHLTNVIITGYNGTIDGQGQM--------WWDLWWN---RTLKHTRGHLVELMNS 74
+ I TN I G +GTIDGQG + WWDL + + LK L+++ S
Sbjct: 127 AFITATSTTNSGIYG-SGTIDGQGGVKLQDKKVSWWDLAADAKVKKLKQNTPRLIQINKS 185
Query: 75 NNILISNLTFRNSPFWTIHPVYCRNVVIKG--MTILAPLNAPNTDGIDPDSSTNVCIEDC 132
N + N++ NSP + H V+ TI P A NTDGIDP SS N+ I
Sbjct: 186 KNFTLYNVSLINSPNF--HVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAHS 243
Query: 133 YIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVD 192
I +GDD VA+K+ + G A R S I+ G T G IGSE + G++NVTVD
Sbjct: 244 SISTGDDNVAIKA---YKGRAETRNIS--ILHNEFG---TGHGTSIGSE-TMGVYNVTVD 294
Query: 193 QLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDPKALP 252
L++ G+RIK+DK G + + N+ M+ V PI I D E + +P
Sbjct: 295 DLNMNGTTNGLRIKSDKSAAGVVNGVRYSNVVMKNVAKPIVI-----DTVYEKKEGSNVP 349
Query: 253 KIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQCQFV 305
I+F ++ S T VL G + E+ MKNV L + WQ + V
Sbjct: 350 DWSDITFKDITS-QTKGVVVLNGENAKKPIEVTMKNVK---LTSDSTWQIKNV 398
>gi|336415463|ref|ZP_08595802.1| hypothetical protein HMPREF1017_02910 [Bacteroides ovatus
3_8_47FAA]
gi|335940342|gb|EGN02209.1| hypothetical protein HMPREF1017_02910 [Bacteroides ovatus
3_8_47FAA]
Length = 511
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/250 (31%), Positives = 124/250 (49%), Gaps = 36/250 (14%)
Query: 5 PIIDPLPSYGRGRERLGGRHI----SLIHGDHLTNVIITGYNGTIDGQGQMWWDLWW--- 57
P I P + R R+ G + ++I+ + N I+G GT+D +G+++WD +W
Sbjct: 129 PSIHHYPEF---RSRIAGIEMTWPAAVINIVNEKNASISG-EGTLDCRGKVFWDKYWEMR 184
Query: 58 ------------NRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGM 105
+ K RG L+E S++I + T + FW +Y I G+
Sbjct: 185 KEYEAKGLRWIVDYDCKRVRGILIE--RSSDITLKGFTLMRTGFWGCQILYSDYCTIDGL 242
Query: 106 TILAPL--NAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIV 163
TI + + P+TDGID DSS N+ +E+C ++ DD + +KSG D G+ + P+ N+++
Sbjct: 243 TINNNIGGHGPSTDGIDIDSSCNILVENCDVDCNDDNICIKSGRDADGLRVNLPTENVVI 302
Query: 164 R----RVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENIT 219
R R TC GSE SG I NV L +A +R+K+ RGG IENI
Sbjct: 303 RNCIARKGAGLITC-----GSETSGSIRNVLGYNLEAIGTSAVLRLKSAMNRGGTIENIY 357
Query: 220 IRNIKMERVK 229
+ +K E V+
Sbjct: 358 MTEVKAENVR 367
>gi|407700954|ref|YP_006825741.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii str.
'Black Sea 11']
gi|407250101|gb|AFT79286.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii str.
'Black Sea 11']
Length = 476
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 144/301 (47%), Gaps = 36/301 (11%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNR--TLKHT-----------------RGH 67
LI+ ++ +V ITG GTIDG Q + W+ + T H GH
Sbjct: 156 LIYALNVEDVAITG-KGTIDGNAQSAFIGWYEKQNTDMHALRKMGFDGVPVEKRQFGEGH 214
Query: 68 -----LVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
L++ ++ +L+ + T NSPFW H VY + ++ + + + L N DG+D +
Sbjct: 215 YLRPPLIQFFHAKRVLLEDYTALNSPFWVNHLVYTSHATVRRVKVESHLY--NNDGLDIE 272
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SS V ED + +GDD + +KSG D G + PS++I+ R + G+G+GSEM
Sbjct: 273 SSQFVLAEDNHFRTGDDGIVIKSGRDADGRNIGIPSTDIVAR--NNDLGGEDGIGLGSEM 330
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVK--IPIRISRGSND 240
SGGI V + + + + R K++ RGG +E I IR K+ K +++ SN
Sbjct: 331 SGGIKRVFFENNVLQEGDSAYRFKSNLDRGGRVEMIRIRGSKVASFKHLFWFQLNYPSNL 390
Query: 241 HPDEGWDPKALPK--IRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSA 298
H G P I ++ NV +V AP A + +F++I +K + + +A
Sbjct: 391 H---GNFPATYTDIIIEDLTVENVGTVLEIHAPDAAPVHNVKFKDITIKKAEEILILENA 447
Query: 299 K 299
K
Sbjct: 448 K 448
>gi|237712598|ref|ZP_04543079.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|423229037|ref|ZP_17215442.1| hypothetical protein HMPREF1063_01262 [Bacteroides dorei
CL02T00C15]
gi|423244877|ref|ZP_17225951.1| hypothetical protein HMPREF1064_02157 [Bacteroides dorei
CL02T12C06]
gi|229453919|gb|EEO59640.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|392634790|gb|EIY28702.1| hypothetical protein HMPREF1063_01262 [Bacteroides dorei
CL02T00C15]
gi|392640918|gb|EIY34709.1| hypothetical protein HMPREF1064_02157 [Bacteroides dorei
CL02T12C06]
Length = 462
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 94/173 (54%), Gaps = 13/173 (7%)
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
H R HL+ N+L+ R SPFWTIH C +++ + + A + N DGID +
Sbjct: 204 HLRPHLIHFNRCKNVLLDEFKIRQSPFWTIHLYMCDGGIVRNLDVKA--HGHNNDGIDLE 261
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRR---VSGTTPTCSGVGIG 179
S N IE+C + GDD V +K+G + + P NI++R + G T +GIG
Sbjct: 262 MSCNFLIENCVFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRHCDILKGHTL----LGIG 317
Query: 180 SEMSGGIFNVTVDQLHVWDAAAGVRI-KTDKGRGGYIENITIRNI---KMERV 228
SEMSGG+ NV + D+ + KT+ RGG+IENI ++N+ KM+RV
Sbjct: 318 SEMSGGVRNVYMHNCTAPDSVFRLFFAKTNHRRGGFIENIWMKNVKAGKMQRV 370
>gi|212690918|ref|ZP_03299046.1| hypothetical protein BACDOR_00406 [Bacteroides dorei DSM 17855]
gi|212666150|gb|EEB26722.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
Length = 462
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 94/173 (54%), Gaps = 13/173 (7%)
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
H R HL+ N+L+ R SPFWTIH C +++ + + A + N DGID +
Sbjct: 204 HLRPHLIHFNRCKNVLLDEFKIRQSPFWTIHLYMCDGGIVRNLDVKA--HGHNNDGIDLE 261
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRR---VSGTTPTCSGVGIG 179
S N IE+C + GDD V +K+G + + P NI++R + G T +GIG
Sbjct: 262 MSCNFLIENCVFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRHCDILKGHTL----LGIG 317
Query: 180 SEMSGGIFNVTVDQLHVWDAAAGVRI-KTDKGRGGYIENITIRNI---KMERV 228
SEMSGG+ NV + D+ + KT+ RGG+IENI ++N+ KM+RV
Sbjct: 318 SEMSGGVRNVYMHNCTAPDSVFRLFFAKTNHRRGGFIENIWMKNVKAGKMQRV 370
>gi|383112459|ref|ZP_09933252.1| hypothetical protein BSGG_0668 [Bacteroides sp. D2]
gi|313693133|gb|EFS29968.1| hypothetical protein BSGG_0668 [Bacteroides sp. D2]
Length = 454
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 95/177 (53%), Gaps = 10/177 (5%)
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
H R HL+ N+L+ + R SPFWTIH C +++ + + A + N DGID +
Sbjct: 198 HLRPHLIHFNRCENVLLDSFKIRESPFWTIHMYMCNGGIVRNLDVKA--HGHNNDGIDLE 255
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
+ N +EDC + GDD V +K+G + + P+ NI++R + + +GIGSE+
Sbjct: 256 MTRNFLVEDCTFDQGDDAVVIKAGRNRDAWRLNTPTENIVIRNCN-ILEGHTLLGIGSEI 314
Query: 183 SGGIFNVTVDQLHVWDAAAGVR----IKTDKGRGGYIENITIRNIKMERVKIPIRIS 235
SGGI NV +H A VR +KT+ RG +IENI + NI+ V+ + I
Sbjct: 315 SGGIRNV---YMHDCKAPQSVRRLFFVKTNHRRGAFIENIHMENIRTGHVQRVLEID 368
>gi|345512498|ref|ZP_08792024.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|229435434|gb|EEO45511.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
Length = 462
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 93/170 (54%), Gaps = 7/170 (4%)
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
H R HL+ N+L+ R SPFWT+H C +++ + + A + N DGID +
Sbjct: 204 HLRPHLIHFNRCKNVLLDEFKIRQSPFWTVHLYMCDGGIVRNLDVKA--HGHNNDGIDLE 261
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S N IE+C + GDD V +K+G + + P NI+VR + + +GIGSEM
Sbjct: 262 MSRNFLIENCVFDQGDDAVVIKAGRNQDAWRLNTPCENIVVRHCN-ILKGHTLLGIGSEM 320
Query: 183 SGGIFNVTVDQLHVWDAAAGVRI-KTDKGRGGYIENITIRNI---KMERV 228
SGG+ NV + D+ + KT+ RGG+IENI ++N+ KM+RV
Sbjct: 321 SGGVRNVYMHNCTAPDSVFRLFFAKTNHRRGGFIENIWMKNVKAGKMQRV 370
>gi|336417632|ref|ZP_08597953.1| hypothetical protein HMPREF1017_05061 [Bacteroides ovatus
3_8_47FAA]
gi|335935373|gb|EGM97327.1| hypothetical protein HMPREF1017_05061 [Bacteroides ovatus
3_8_47FAA]
Length = 454
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 95/177 (53%), Gaps = 10/177 (5%)
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
H R HL+ N+L+ + R SPFWTIH C +++ + + A + N DGID +
Sbjct: 198 HLRPHLIHFNRCENVLLDSFKIRESPFWTIHMYMCNGGIVRNLDVKA--HGHNNDGIDLE 255
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
+ N +EDC + GDD V +K+G + + P+ NI++R + + +GIGSE+
Sbjct: 256 MTRNFLVEDCTFDQGDDAVVIKAGRNRDAWRLNTPTENIVIRNCN-ILEGHTLLGIGSEI 314
Query: 183 SGGIFNVTVDQLHVWDAAAGVR----IKTDKGRGGYIENITIRNIKMERVKIPIRIS 235
SGGI NV +H A VR +KT+ RG +IENI + NI+ V+ + I
Sbjct: 315 SGGIRNV---YMHDCKAPQSVRRLFFVKTNHRRGAFIENIHMENIRTGHVQRVLEID 368
>gi|265752277|ref|ZP_06088070.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
gi|263237069|gb|EEZ22539.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
Length = 462
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 94/173 (54%), Gaps = 13/173 (7%)
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
H R HL+ N+L+ R SPFWTIH C +++ + + A + N DGID +
Sbjct: 204 HLRPHLIHFNRCKNVLLDEFKIRQSPFWTIHLYMCDGGIVRNLDVKA--HGHNNDGIDLE 261
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRR---VSGTTPTCSGVGIG 179
S N IE+C + GDD V +K+G + + P NI++R + G T +GIG
Sbjct: 262 MSCNFLIENCVFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRHCDILKGHTL----LGIG 317
Query: 180 SEMSGGIFNVTVDQLHVWDAAAGVRI-KTDKGRGGYIENITIRNI---KMERV 228
SEMSGG+ NV + D+ + KT+ RGG+IENI ++N+ KM+RV
Sbjct: 318 SEMSGGVRNVYMHNCTAPDSVFRLFFAKTNHRRGGFIENIWMKNVKAGKMQRV 370
>gi|170736971|ref|YP_001778231.1| glycoside hydrolase family protein [Burkholderia cenocepacia MC0-3]
gi|169819159|gb|ACA93741.1| glycoside hydrolase family 28 [Burkholderia cenocepacia MC0-3]
Length = 665
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 93/173 (53%), Gaps = 18/173 (10%)
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+ R +VE + N+L++N +N+PFW HP RNVVI+G+T + PN DG DPD
Sbjct: 333 YLRPCMVEFIGCTNVLMANYQTQNTPFWQHHPTASRNVVIRGVTTNS--IGPNNDGFDPD 390
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWD---HYGIAMARPSSNIIVRRVSGTTPTCSGVGIG 179
+ T+V EDC +GDD +A+KSG D YG A N + G G+ +G
Sbjct: 391 ACTDVLCEDCTFNTGDDCIAIKSGKDRDTEYGPAKRHLIRNCTMNSGHG------GITLG 444
Query: 180 SEMSGGIFNVTVDQLHVWDA-------AAGVRIKTDKGRGGYIENITIRNIKM 225
SEM GG+ + L + +A VR+KT+ RGGY+++ ++ + +
Sbjct: 445 SEMGGGVEQIYATNLSMLNANWQTNPLNIAVRVKTNMNRGGYVKDFHVKGVTL 497
>gi|150002759|ref|YP_001297503.1| polygalacturonase [Bacteroides vulgatus ATCC 8482]
gi|149931183|gb|ABR37881.1| glycoside hydrolase family 28, candidate polygalacturonase
[Bacteroides vulgatus ATCC 8482]
Length = 462
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 93/170 (54%), Gaps = 7/170 (4%)
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
H R HL+ N+L+ R SPFWTIH C +++ + + A + N DGID +
Sbjct: 204 HLRPHLIHFNRCKNVLLDEFKIRQSPFWTIHLYMCDGGIVRNLDVKA--HGHNNDGIDLE 261
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S N IE+C + GDD V +K+G + + P NI++R + + +GIGSEM
Sbjct: 262 MSRNFLIENCVFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRHCN-ILKGHTLLGIGSEM 320
Query: 183 SGGIFNVTVDQLHVWDAAAGVRI-KTDKGRGGYIENITIRNI---KMERV 228
SGG+ NV + D+ + KT+ RGG+IENI ++N+ KM+RV
Sbjct: 321 SGGVRNVYMHNCTAPDSVFRLFFAKTNHRRGGFIENIWMKNVKAGKMQRV 370
>gi|237721218|ref|ZP_04551699.1| glycoside hydrolase family 28 protein [Bacteroides sp. 2_2_4]
gi|229449014|gb|EEO54805.1| glycoside hydrolase family 28 protein [Bacteroides sp. 2_2_4]
Length = 495
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 124/250 (49%), Gaps = 36/250 (14%)
Query: 5 PIIDPLPSYGRGRERLGGRHI----SLIHGDHLTNVIITGYNGTIDGQGQMWWDLWW--- 57
P I P + R R+ G + ++I+ + N ++G GT+D +G+++WD +W
Sbjct: 113 PYIHHYPEF---RSRIAGIEMTWPAAVINIVNEKNASVSG-EGTLDCRGKVFWDKYWEMR 168
Query: 58 ------------NRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGM 105
+ K RG L+E S++I + T + FW +Y I G+
Sbjct: 169 KEYEAKGLRWIVDYDCKRVRGILIE--RSSDITLKGFTLMRTGFWGCQILYSDYCTIDGL 226
Query: 106 TILAPL--NAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIV 163
TI + + P+TDGID DSS N+ +E+C ++ DD + +KSG D G+ + P+ N+++
Sbjct: 227 TINNNIGGHGPSTDGIDIDSSCNILVENCDVDCNDDNICIKSGRDADGLRVNLPTENVVI 286
Query: 164 R----RVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENIT 219
R R TC GSE SG I NV L +A +R+K+ RGG IENI
Sbjct: 287 RNCIARKGAGLITC-----GSETSGSIRNVLGYNLEAIGTSAVLRLKSAMNRGGTIENIY 341
Query: 220 IRNIKMERVK 229
+ +K E V+
Sbjct: 342 MTEVKAENVR 351
>gi|427385675|ref|ZP_18881982.1| hypothetical protein HMPREF9447_03015 [Bacteroides oleiciplenus YIT
12058]
gi|425726714|gb|EKU89577.1| hypothetical protein HMPREF9447_03015 [Bacteroides oleiciplenus YIT
12058]
Length = 532
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 128/263 (48%), Gaps = 43/263 (16%)
Query: 13 YGRGRERLGGRHISLIHGDHLTNVI------ITGYNGTIDGQGQMWWDLWW--------- 57
Y R R+ G I +I + N+I ++G GT+D +G+++WD +W
Sbjct: 155 YPEFRSRIAG--IEMIWPAAVINIIGEKKASVSG-EGTLDCRGKIFWDKYWAMRKEYEAK 211
Query: 58 ------NRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPL 111
+ K RG LVE S++I +SN T + FW +Y + + G+ I +
Sbjct: 212 GLRWIVDYDCKRVRGILVE--RSSDITLSNFTLMRTGFWGCQILYSDHCTVDGLNIDNNI 269
Query: 112 --NAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGT 169
+ P+TDGID DSSTN+ IE+C I+ DD++ +K+G D G+ + R + N+++R +
Sbjct: 270 GGHGPSTDGIDIDSSTNILIENCTIDCNDDIICLKAGRDADGLRVNRSTENVLIRNCTAH 329
Query: 170 TPTCSGVGI---GSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKME 226
G G+ GSE SG I N+ L + +K+ RGG +EN+ + ++ E
Sbjct: 330 ----RGAGLITCGSETSGSIRNILAYDLKAIGTSVVFLLKSAMTRGGTVENVYVTRVEAE 385
Query: 227 RVKIPIRISRGSNDHPDEGWDPK 249
V+ D W+PK
Sbjct: 386 NVRQVF--------GADPNWNPK 400
>gi|319643181|ref|ZP_07997809.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345520529|ref|ZP_08799916.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|423315312|ref|ZP_17293242.1| hypothetical protein HMPREF1058_03854 [Bacteroides vulgatus
CL09T03C04]
gi|423315336|ref|ZP_17293266.1| hypothetical protein HMPREF1058_03878 [Bacteroides vulgatus
CL09T03C04]
gi|254835049|gb|EET15358.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|317385085|gb|EFV66036.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|392679549|gb|EIY72930.1| hypothetical protein HMPREF1058_03854 [Bacteroides vulgatus
CL09T03C04]
gi|392679573|gb|EIY72954.1| hypothetical protein HMPREF1058_03878 [Bacteroides vulgatus
CL09T03C04]
Length = 462
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 94/173 (54%), Gaps = 13/173 (7%)
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
H R HL+ N+L+ R SPFWTIH C +++ + + A + N DGID +
Sbjct: 204 HLRPHLIHFNRCKNVLLDEFKIRQSPFWTIHLYMCDGGIVRNLDVKA--HGHNNDGIDLE 261
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRR---VSGTTPTCSGVGIG 179
S N IE+C + GDD V +K+G + + P NI++R + G T +GIG
Sbjct: 262 MSRNFLIENCVFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRHCDILKGHTL----LGIG 317
Query: 180 SEMSGGIFNVTVDQLHVWDAAAGVRI-KTDKGRGGYIENITIRNI---KMERV 228
SEMSGG+ NV + D+ + KT+ RGG+IENI ++N+ KM+RV
Sbjct: 318 SEMSGGVRNVYMHNCTAPDSVFRLFFAKTNHRRGGFIENIWMKNVKAGKMQRV 370
>gi|403057463|ref|YP_006645680.1| polygalacturonase [Pectobacterium carotovorum subsp. carotovorum
PCC21]
gi|402804789|gb|AFR02427.1| polygalacturonase [Pectobacterium carotovorum subsp. carotovorum
PCC21]
Length = 402
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 95/277 (34%), Positives = 134/277 (48%), Gaps = 33/277 (11%)
Query: 43 GTIDGQGQM--------WWDLWWN---RTLKHTRGHLVELMNSNNILISNLTFRNSPFWT 91
GTIDGQG + WWDL + + LK L+++ S N + N++ NSP +
Sbjct: 143 GTIDGQGGVKLQDKKVSWWDLAADAKVKKLKQNTPRLIQINKSKNFTLYNVSLINSPNF- 201
Query: 92 IHPVYCRNVVIKG--MTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDH 149
H V+ TI P A NTDGIDP SS N+ I I +GDD VA+K+ +
Sbjct: 202 -HVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAHSSISTGDDNVAIKA---Y 257
Query: 150 YGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDK 209
G A R S I+ G T G+ IGSE + G++NVTVD L++ G+RIK+DK
Sbjct: 258 KGRAETRNVS--ILHNEFG---TGHGMSIGSE-TMGVYNVTVDDLNMNGTTNGLRIKSDK 311
Query: 210 GRGGYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTK 269
G + + N+ M+ V PI I D E + +P I+F ++ S T
Sbjct: 312 SAAGVVNGVRYSNVVMKNVAKPIVI-----DTVYEKKEGSNVPDWSDITFKDITS-QTKG 365
Query: 270 APVLAGIIGTQFEEICMKNVSLLGLAPSAKWQCQFVS 306
VL G + E+ MKNV L + WQ + V+
Sbjct: 366 VVVLNGENAKKPIEVTMKNVK---LTSDSTWQIKNVT 399
>gi|371778396|ref|ZP_09484718.1| glycoside hydrolase [Anaerophaga sp. HS1]
Length = 572
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 116/252 (46%), Gaps = 18/252 (7%)
Query: 57 WNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNT 116
+ + R +V + +L+ TF+NSP W IHP+ C +V I+ +T+ P + N
Sbjct: 232 FEKIKDFLRPVMVSIKECKRVLLDGPTFQNSPAWNIHPLLCEDVTIRNLTVRNPWYSQNG 291
Query: 117 DGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGV 176
DG+D +S NV I + + GDD + KSG D G A P+ N++V+ G
Sbjct: 292 DGLDLESCKNVVIYNNSFDVGDDAICFKSGKDEDGRKRAVPTENVVVKNNV-VYHGHGGF 350
Query: 177 GIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKI-PIR-- 233
IGSEMSGG+ NV V G+R K+ +GRGG +ENI I NI M + PIR
Sbjct: 351 VIGSEMSGGVRNVHVSNCTFIGTDVGLRFKSTRGRGGVVENIYISNIDMIDIPTEPIRFN 410
Query: 234 ---------ISRGSNDHPDEGWDPKA-----LPKIRGISFVNVVSVNTTKAPVLAGIIGT 279
+ G N PD + A P R I N+ + A G+
Sbjct: 411 LFYGGKSPVLDDGGNSVPDIQENEPAPVTEETPAFRNIFMKNIRANGFGNAAFFMGLPEM 470
Query: 280 QFEEICMKNVSL 291
+ + ++N L
Sbjct: 471 NLQNVHLENALL 482
>gi|423239876|ref|ZP_17220991.1| hypothetical protein HMPREF1065_01614 [Bacteroides dorei
CL03T12C01]
gi|392644865|gb|EIY38599.1| hypothetical protein HMPREF1065_01614 [Bacteroides dorei
CL03T12C01]
Length = 462
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 94/173 (54%), Gaps = 13/173 (7%)
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
H R HL+ N+L+ R SPFWTIH C +++ + + A + N DGID +
Sbjct: 204 HLRPHLIHFNRCKNVLLDEFKIRQSPFWTIHLYMCDGGIVRNLDVKA--HGHNNDGIDLE 261
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRR---VSGTTPTCSGVGIG 179
S N IE+C + GDD V +K+G + + P NI++R + G T +GIG
Sbjct: 262 MSRNFLIENCVFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRHCDILKGHTL----LGIG 317
Query: 180 SEMSGGIFNVTVDQLHVWDAAAGVRI-KTDKGRGGYIENITIRNI---KMERV 228
SEMSGG+ NV + D+ + KT+ RGG+IENI ++N+ KM+RV
Sbjct: 318 SEMSGGVRNVYMHNCTAPDSVFRLFFAKTNHRRGGFIENIWMKNVKAGKMQRV 370
>gi|206564620|ref|YP_002235383.1| putative polygalacturonate hydrolase [Burkholderia cenocepacia
J2315]
gi|444359790|ref|ZP_21161085.1| polygalacturonase domain protein [Burkholderia cenocepacia BC7]
gi|444367969|ref|ZP_21167846.1| polygalacturonase domain protein [Burkholderia cenocepacia
K56-2Valvano]
gi|198040660|emb|CAR56646.1| putative polygalacturonate hydrolase [Burkholderia cenocepacia
J2315]
gi|443601359|gb|ELT69502.1| polygalacturonase domain protein [Burkholderia cenocepacia BC7]
gi|443601809|gb|ELT69929.1| polygalacturonase domain protein [Burkholderia cenocepacia
K56-2Valvano]
Length = 665
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 93/173 (53%), Gaps = 18/173 (10%)
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+ R +VE + N+L++N +N+PFW HP RNVVI+G+T + PN DG DPD
Sbjct: 333 YLRPCMVEFIGCTNVLMANYQTQNTPFWQHHPTASRNVVIRGVTTNS--IGPNNDGFDPD 390
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWD---HYGIAMARPSSNIIVRRVSGTTPTCSGVGIG 179
+ T+V EDC +GDD +A+KSG D YG A N + G G+ +G
Sbjct: 391 ACTDVLCEDCTFNTGDDCIAIKSGKDRDTEYGPAKRHLIRNCTMNSGHG------GITLG 444
Query: 180 SEMSGGIFNVTVDQLHVWDA-------AAGVRIKTDKGRGGYIENITIRNIKM 225
SEM GG+ + L + +A +R+KT+ RGGY+++ ++ + +
Sbjct: 445 SEMGGGVEQIYASNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVTL 497
>gi|421863816|ref|ZP_16295509.1| Polygalacturonase [Burkholderia cenocepacia H111]
gi|358076142|emb|CCE46387.1| Polygalacturonase [Burkholderia cenocepacia H111]
Length = 665
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 93/173 (53%), Gaps = 18/173 (10%)
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+ R +VE + N+L++N +N+PFW HP RNVVI+G+T + PN DG DPD
Sbjct: 333 YLRPCMVEFIGCTNVLMANYQTQNTPFWQHHPTASRNVVIRGVTTNS--IGPNNDGFDPD 390
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWD---HYGIAMARPSSNIIVRRVSGTTPTCSGVGIG 179
+ T+V EDC +GDD +A+KSG D YG A N + G G+ +G
Sbjct: 391 ACTDVLCEDCTFNTGDDCIAIKSGKDRDTEYGPAKRHLIRNCTMNSGHG------GITLG 444
Query: 180 SEMSGGIFNVTVDQLHVWDA-------AAGVRIKTDKGRGGYIENITIRNIKM 225
SEM GG+ + L + +A +R+KT+ RGGY+++ ++ + +
Sbjct: 445 SEMGGGVEQIYASNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVTL 497
>gi|423223575|ref|ZP_17210044.1| hypothetical protein HMPREF1062_02230 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392638200|gb|EIY32047.1| hypothetical protein HMPREF1062_02230 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 532
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 96/186 (51%), Gaps = 2/186 (1%)
Query: 43 GTIDGQGQMWWDLWWNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVI 102
GT+ G +W+ + L R +V + +L+ + F+NSP + ++ + N+V+
Sbjct: 183 GTVKQDGAIWYPETSSEKLAKKRPRMVRFVRCERVLLQGVVFQNSPSFHVNFILSDNIVV 242
Query: 103 KGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNII 162
G+ + P NA N DGID S TN I +C +++GDD + +KSG G P +NII
Sbjct: 243 DGIMVRCPWNAQNGDGIDLSSCTNALIVNCAVDAGDDAICLKSGIGDVGRRRG-PCANII 301
Query: 163 VRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRN 222
+ + G IGS+ GGI V+V D G+R K+ +GRGG + N+ + N
Sbjct: 302 IDNCT-VFHGHGGFVIGSDTGGGIDRVSVRNCRFIDTDTGLRFKSKRGRGGVVSNVYVDN 360
Query: 223 IKMERV 228
I M +
Sbjct: 361 IMMNDI 366
>gi|160886934|ref|ZP_02067937.1| hypothetical protein BACOVA_04948 [Bacteroides ovatus ATCC 8483]
gi|423294892|ref|ZP_17273019.1| parallel beta-helix [Bacteroides ovatus CL03T12C18]
gi|156107345|gb|EDO09090.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|392676083|gb|EIY69524.1| parallel beta-helix [Bacteroides ovatus CL03T12C18]
Length = 511
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 124/250 (49%), Gaps = 36/250 (14%)
Query: 5 PIIDPLPSYGRGRERLGGRHI----SLIHGDHLTNVIITGYNGTIDGQGQMWWDLWW--- 57
P I P + R R+ G + ++I+ + N ++G GT+D +G+++WD +W
Sbjct: 129 PSIHHYPEF---RSRIAGIEMTWPAAVINIVNEKNASVSG-EGTLDCRGKVFWDKYWEMR 184
Query: 58 ------------NRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGM 105
+ K RG L+E S++I + T + FW +Y I G+
Sbjct: 185 KEYEAKGLRWIVDYDCKRVRGILIE--RSSDITLKGFTLMRTGFWGCQILYSDYCTIDGL 242
Query: 106 TILAPL--NAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIV 163
TI + + P+TDGID DSS N+ +E+C ++ DD + +KSG D G+ + P+ N+++
Sbjct: 243 TINNNIGGHGPSTDGIDIDSSCNILVENCDVDCNDDNICIKSGRDADGLRVNLPTENVVI 302
Query: 164 R----RVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENIT 219
R R TC GSE SG I NV L +A +R+K+ RGG IENI
Sbjct: 303 RNCIARKGAGLITC-----GSETSGSIRNVLGYNLEAIGTSAVLRLKSAMNRGGTIENIY 357
Query: 220 IRNIKMERVK 229
+ +K E V+
Sbjct: 358 MTEVKAENVR 367
>gi|189467900|ref|ZP_03016685.1| hypothetical protein BACINT_04292 [Bacteroides intestinalis DSM
17393]
gi|189436164|gb|EDV05149.1| FG-GAP repeat protein [Bacteroides intestinalis DSM 17393]
Length = 1068
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 92/171 (53%), Gaps = 13/171 (7%)
Query: 65 RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSS 124
R HL+ N+L+ R SPFWTIH C +++ + + A + N DG+D + S
Sbjct: 209 RPHLIHFNRCKNVLLDQFKIRESPFWTIHLYMCDGGIVRNLDVYA--HGHNNDGVDLEMS 266
Query: 125 TNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRR---VSGTTPTCSGVGIGSE 181
N IEDC + GDD V +K+G + + P NI++R + G T +GIGSE
Sbjct: 267 RNFLIEDCKFDQGDDAVVIKAGRNQDAWRLDTPCENIVIRNCDIIKGHTL----LGIGSE 322
Query: 182 MSGGIFNVTVDQLHVWDAAAGVRI-KTDKGRGGYIENITIRNI---KMERV 228
MSGGI NV + D+ + KT+ RGG+IENI + N+ KM+RV
Sbjct: 323 MSGGIRNVYMHDCAAPDSVFRLFFAKTNHRRGGFIENIHMENVKAGKMQRV 373
>gi|399029277|ref|ZP_10730250.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398072887|gb|EJL64081.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 563
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 90/164 (54%), Gaps = 1/164 (0%)
Query: 65 RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSS 124
R +V L+N +L+ +TF+NSP W ++P+ C NV + + I P + N DG+D +S
Sbjct: 235 RPVMVSLVNCKKLLLDGVTFQNSPAWNVNPLMCENVTLSNLNIRNPWYSQNGDGLDLESC 294
Query: 125 TNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSG 184
+ +C + GDD + +KSG D G +P+ +++ G IGSEMSG
Sbjct: 295 RIGTVTNCRFDVGDDAICIKSGKDQEGRERGKPTELFVIKDCV-VYHGHGGFVIGSEMSG 353
Query: 185 GIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERV 228
G+ N+ + L G+R K+ +GRGG +ENI + +I+M +
Sbjct: 354 GVRNLFIKNLTFIGTDCGLRFKSTRGRGGLVENIWMEDIRMSDI 397
>gi|325105247|ref|YP_004274901.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324974095|gb|ADY53079.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 456
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 109/230 (47%), Gaps = 34/230 (14%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLW---------WNRTLKHT------------- 64
I+ + NV I G GTIDG + ++LW +R + H
Sbjct: 143 FIYAYQVKNVAIIG-EGTIDGNAKDSFNLWHGKQKQSQELSRKMNHENVPIEKRQFGEGH 201
Query: 65 --RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
R ++ NILI +T NSPFW +H + N+ + + A N DG DP+
Sbjct: 202 FLRPQFIQFFECKNILIEGVTITNSPFWCVHFLKSENITARKVKFDAF--NKNNDGFDPE 259
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVR--RVSGTTPTCSGVGIGS 180
S NV IED + DD +A+K+G D+ G + S NII+R R G GV IGS
Sbjct: 260 YSKNVLIEDIDFNNADDNIAIKAGRDYEGRRIGLTSENIIIRNCRFKG----LHGVVIGS 315
Query: 181 EMSGGIFNVTVDQL-HVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVK 229
EMS G+ NV V+ + G+ +K++ RGG+I +I I N+ V+
Sbjct: 316 EMSAGVQNVFVENCTYGGYCKRGIYLKSNPDRGGFIRDIYINNVVFGEVE 365
>gi|255691972|ref|ZP_05415647.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii
DSM 17565]
gi|260622381|gb|EEX45252.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 453
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 95/177 (53%), Gaps = 10/177 (5%)
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
H R HL+ N+L+ + R SPFWTIH C +++ + + A + N DGID +
Sbjct: 198 HLRPHLIHFNRCENVLLDSFKIRESPFWTIHMYMCNGGIVRNLDVKA--HGHNNDGIDLE 255
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
+ N +EDC + GDD V +K+G + + P+ NI++R + + +GIGSE+
Sbjct: 256 MTRNFLVEDCTFDQGDDAVVIKAGRNRDAWRLNTPTENIVIRNCN-ILEGHTLLGIGSEI 314
Query: 183 SGGIFNVTVDQLHVWDAAAGVR----IKTDKGRGGYIENITIRNIKMERVKIPIRIS 235
SGGI NV +H A VR +KT+ RG ++ENI + NI+ V+ + I
Sbjct: 315 SGGIRNV---YMHDCKAPQSVRRLFFVKTNHRRGAFVENIHMENIRTGHVQRVLEID 368
>gi|227113343|ref|ZP_03826999.1| endo-polygalacturonase [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 402
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 95/277 (34%), Positives = 134/277 (48%), Gaps = 33/277 (11%)
Query: 43 GTIDGQGQM--------WWDLWWN---RTLKHTRGHLVELMNSNNILISNLTFRNSPFWT 91
GTIDGQG + WWDL + + LK L+++ S N + N++ NSP +
Sbjct: 143 GTIDGQGGVKLQDKKVSWWDLAADAKVKKLKQNTPRLIQINKSKNFTLYNVSLINSPNF- 201
Query: 92 IHPVYCRNVVIKG--MTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDH 149
H V+ TI P A NTDGIDP SS N+ I I +GDD VA+K+ +
Sbjct: 202 -HVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAHSSISTGDDNVAIKA---Y 257
Query: 150 YGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDK 209
G A R S I+ G T G+ IGSE + G++NVTVD L++ G+RIK+DK
Sbjct: 258 KGRAETRNIS--ILHNEFG---TGHGMSIGSE-TMGVYNVTVDDLNMNGTTNGLRIKSDK 311
Query: 210 GRGGYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTK 269
G + + N+ M+ V PI I D E + +P I+F ++ S T
Sbjct: 312 SAAGVVNGVRYSNVVMKNVAKPIVI-----DTVYEKKEGSNVPDWSDITFKDITS-QTKG 365
Query: 270 APVLAGIIGTQFEEICMKNVSLLGLAPSAKWQCQFVS 306
VL G + E+ MKNV L + WQ + V+
Sbjct: 366 VVVLNGENAKKPIEVTMKNVK---LTSDSTWQIKNVT 399
>gi|325679916|ref|ZP_08159485.1| polygalacturonase (pectinase) [Ruminococcus albus 8]
gi|324108354|gb|EGC02601.1| polygalacturonase (pectinase) [Ruminococcus albus 8]
Length = 513
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 110/213 (51%), Gaps = 8/213 (3%)
Query: 24 HISLIHGDHLTNVIITGYNGTIDGQGQ--MWWDLWWNRTLKHTRGHLVELMNSNNILISN 81
H +L+ ++ ++ I G GT+DG Q WW N+ + R L+ + +
Sbjct: 175 HQALLFAEYAEDIKIVG-RGTVDGNAQNSQWWVDVKNQEVPRPR--LIFFNRCKLVTVHG 231
Query: 82 LTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLV 141
+T +N+ W +HP + + +++ AP ++PNTD +DP++ V I C GDD +
Sbjct: 232 ITAQNAASWQLHPYFSTELQFLDLSVNAPKDSPNTDALDPEACDTVNIVGCRFSVGDDCI 291
Query: 142 AVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAA 201
A+KSG G +P++ +R + +GSEM+GG+ N++V + +
Sbjct: 292 AIKSGKIEIGRKFKQPANRHTIRNCIMQFGH-GAITLGSEMAGGVKNLSVSRCIFKETDR 350
Query: 202 GVRIKTDKGRG--GYIENITIRNIKMERVKIPI 232
G+RIKT +GRG I+ I +NIKM+ V PI
Sbjct: 351 GLRIKTRRGRGKDAVIDGIEFKNIKMDGVLTPI 383
>gi|254249598|ref|ZP_04942918.1| Endopolygalacturonase [Burkholderia cenocepacia PC184]
gi|124876099|gb|EAY66089.1| Endopolygalacturonase [Burkholderia cenocepacia PC184]
Length = 667
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 93/173 (53%), Gaps = 18/173 (10%)
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+ R +VE + N+L++N +N+PFW HP RNVVI+G+T + PN DG DPD
Sbjct: 335 YLRPCMVEFIGCTNVLMANYQTQNTPFWQHHPTASRNVVIRGVTTNS--IGPNNDGFDPD 392
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWD---HYGIAMARPSSNIIVRRVSGTTPTCSGVGIG 179
+ T+V EDC +GDD +A+KSG D YG A N + G G+ +G
Sbjct: 393 ACTDVLCEDCTFNTGDDCIAIKSGKDRDVEYGPAKRHLIRNCTMNSGHG------GITLG 446
Query: 180 SEMSGGIFNVTVDQLHVWDA-------AAGVRIKTDKGRGGYIENITIRNIKM 225
SEM GG+ + L + +A +R+KT+ RGGY+++ ++ + +
Sbjct: 447 SEMGGGVEQIYATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVTL 499
>gi|314949481|ref|ZP_07852816.1| conserved domain protein [Enterococcus faecium TX0082]
gi|430834090|ref|ZP_19452099.1| glycosyl hydrolase [Enterococcus faecium E0679]
gi|313644095|gb|EFS08675.1| conserved domain protein [Enterococcus faecium TX0082]
gi|430485613|gb|ELA62513.1| glycosyl hydrolase [Enterococcus faecium E0679]
Length = 269
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 90/151 (59%), Gaps = 3/151 (1%)
Query: 82 LTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLV 141
+ F+ S FW + Y +V+++ + I+ + P+TDGID DSSTNV + +C + GDD +
Sbjct: 1 MIFQKSGFWNLQITYSNDVLVEKV-IIRNNDGPSTDGIDIDSSTNVRVYECDLACGDDCI 59
Query: 142 AVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAA 201
A+KSG D G + R SS I V R + GV IGSE+S G+ +V + + + +
Sbjct: 60 AIKSGRDGNGARVNRKSSRIEVARCK--IRSGYGVTIGSEVSAGVSDVYIHDIDFFQSDC 117
Query: 202 GVRIKTDKGRGGYIENITIRNIKMERVKIPI 232
G+R+K+ K RGG IENI + N+ M V+ P
Sbjct: 118 GIRMKSSKERGGVIENIRVENLNMIDVQFPF 148
>gi|427383838|ref|ZP_18880558.1| hypothetical protein HMPREF9447_01591 [Bacteroides oleiciplenus YIT
12058]
gi|425728543|gb|EKU91401.1| hypothetical protein HMPREF9447_01591 [Bacteroides oleiciplenus YIT
12058]
Length = 1068
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 94/176 (53%), Gaps = 10/176 (5%)
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
H R HL+ N+L+ R SPFWTIH C +++ + + A + N DG+D +
Sbjct: 207 HLRPHLIHFNRCQNVLLDQFKIRESPFWTIHLYLCDGGIVRNLDVRA--HGHNNDGVDLE 264
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRR---VSGTTPTCSGVGIG 179
S N +E+C + GDD V +K+G + + P NI++R + G T +GIG
Sbjct: 265 MSRNFLVENCKFDQGDDAVVIKAGRNQDAWRLDTPCENIVIRNCDIIKGHTL----LGIG 320
Query: 180 SEMSGGIFNVTVDQLHVWDAAAGVRI-KTDKGRGGYIENITIRNIKMERVKIPIRI 234
SEMSGGI NV + D+ + KT+ RGG+IENI + N+K +++ + I
Sbjct: 321 SEMSGGIRNVYMHDCAAPDSVFRLFFAKTNHRRGGFIENIHMENVKAGKMQRILEI 376
>gi|298383858|ref|ZP_06993419.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
gi|298263462|gb|EFI06325.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
Length = 538
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 85/163 (52%), Gaps = 1/163 (0%)
Query: 54 DLWWNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNA 113
D WN R L+ + S IL+ +TF+NSP W +HP+ C + + + ++ P +
Sbjct: 227 DEEWNEIRAWLRPVLLSFVKSKKILLEGVTFKNSPSWCLHPLSCEDFTVNNIQVINPWYS 286
Query: 114 PNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTC 173
N D +D +S N I + ++GDD + +KSG D G P N+IV+ +
Sbjct: 287 QNGDALDLESCKNALILNSVFDAGDDAICIKSGKDENGRRRGEPCQNVIVKN-NTVLHGH 345
Query: 174 SGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIE 216
G +GSEMSGG+ N+ V+ G+R K+ +GRGG +E
Sbjct: 346 GGFVVGSEMSGGVKNIYVEDCTFLGTDVGLRFKSTRGRGGVVE 388
>gi|380693930|ref|ZP_09858789.1| exo-poly-alpha-D-galacturonosidase [Bacteroides faecis MAJ27]
Length = 528
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 86/163 (52%), Gaps = 1/163 (0%)
Query: 54 DLWWNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNA 113
D WN R L+ + S +L+ +TF+NSP W +HP+ C ++ + + ++ P +
Sbjct: 217 DEEWNEIRAWLRPVLLSFVKSKKVLLEGVTFKNSPSWCLHPLSCEDITVNNIQVINPWYS 276
Query: 114 PNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTC 173
N D +D +S N I + ++GDD + +KSG D G P N+IV+ +
Sbjct: 277 QNGDALDLESCKNALIINSVFDAGDDAICIKSGKDENGRRRGEPCQNVIVKN-NTVLHGH 335
Query: 174 SGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIE 216
G +GSEMSGG+ N+ V+ G+R K+ +GRGG +E
Sbjct: 336 GGFVVGSEMSGGVKNIYVEDCTFLGTDVGLRFKSTRGRGGVVE 378
>gi|371776328|ref|ZP_09482650.1| glycoside hydrolase family protein [Anaerophaga sp. HS1]
Length = 485
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 144/297 (48%), Gaps = 47/297 (15%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWWNRTLKHT-------------RGHLVELMNSNNILISN 81
NV +TG G I+ QG+ W+ +WN ++T R +++ +S NI + +
Sbjct: 148 NVAVTG-KGVINAQGKYNWENYWNLRHEYTPKGLRWASDYDCKRVRTIQISDSENITLKD 206
Query: 82 LTFRNSPFWTIHPVYCRNVVIKGMTILAPLNA--PNTDGIDPDSSTNVCIEDCYIESGDD 139
R S FWT+H +Y + V + G+TI ++ P+TDG++ DSS+ V I +C ++ DD
Sbjct: 207 FQVRQSGFWTVHILYSKYVTVDGLTIRNNIDGFGPSTDGVNVDSSSYVEIMNCDVDCNDD 266
Query: 140 LVAVKSGWDHYGIAMARPSSNI-----IVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQL 194
VK+G D G+ + +P+ + I RR G+ + IGSE SG + +V + +
Sbjct: 267 NFTVKAGRDADGLRVNKPAEYVYIHDCIARRGGGS------LVIGSETSGWVRHVKSENM 320
Query: 195 HVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRIS-------------RGSNDH 241
+ + +K+ RGG IE+I + N++ + V+ ++ +G +
Sbjct: 321 KALGSHHVLHLKSAFTRGGGIEDIQVENVQADGVRSFCVVTLNWNPSYSYATLPKGIKEI 380
Query: 242 P-------DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 291
P +E + K LP IR +S + ++N A ++G + KNVS+
Sbjct: 381 PSHWKVMLEEVPEEKGLPYIRNVSVEDCHAINVKTAIQVSGTEKSYISGFKFKNVSI 437
>gi|254254779|ref|ZP_04948096.1| Endopolygalacturonase [Burkholderia dolosa AUO158]
gi|124899424|gb|EAY71267.1| Endopolygalacturonase [Burkholderia dolosa AUO158]
Length = 668
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 94/173 (54%), Gaps = 18/173 (10%)
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+ R +VE + N+L+++ +N+PFW HP CRNVVI+G+T + PN DG DPD
Sbjct: 336 YLRPCMVEFIGCTNVLMADYQTQNTPFWQHHPTACRNVVIRGVTTNS--IGPNNDGFDPD 393
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWD---HYGIAMARPSSNIIVRRVSGTTPTCSGVGIG 179
+ T+V E+C +GDD +A+KSG + YG A N + G G+ +G
Sbjct: 394 ACTDVLCEECTFNTGDDCIAIKSGKNLDTEYGPAKRHLIRNCTMNSGHG------GITLG 447
Query: 180 SEMSGGIFNVTVDQLHVWDA-------AAGVRIKTDKGRGGYIENITIRNIKM 225
SEM GG+ + L + +A +R+KT+ RGGY+++ ++ + +
Sbjct: 448 SEMGGGVEQIYATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVSL 500
>gi|383120529|ref|ZP_09941257.1| hypothetical protein BSIG_2461 [Bacteroides sp. 1_1_6]
gi|382985024|gb|EES68500.2| hypothetical protein BSIG_2461 [Bacteroides sp. 1_1_6]
Length = 535
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 85/163 (52%), Gaps = 1/163 (0%)
Query: 54 DLWWNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNA 113
D WN R L+ + S IL+ +TF+NSP W +HP+ C + + + ++ P +
Sbjct: 224 DEEWNEIRAWLRPVLLNFVKSKRILLEGVTFKNSPSWCLHPLSCEDFTVNNIQVINPWYS 283
Query: 114 PNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTC 173
N D +D +S N I + ++GDD + +KSG D G P N+IV+ +
Sbjct: 284 QNGDALDLESCKNALILNSVFDAGDDAICIKSGKDENGRRRGEPCQNVIVKN-NTVLHGH 342
Query: 174 SGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIE 216
G +GSEMSGG+ N+ V+ G+R K+ +GRGG +E
Sbjct: 343 GGFVVGSEMSGGVKNIYVEDCTFLGTDVGLRFKSTRGRGGVVE 385
>gi|322434168|ref|YP_004216380.1| glycoside hydrolase family protein [Granulicella tundricola
MP5ACTX9]
gi|321161895|gb|ADW67600.1| glycoside hydrolase family 28 [Granulicella tundricola MP5ACTX9]
Length = 485
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/300 (31%), Positives = 145/300 (48%), Gaps = 39/300 (13%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQM--------WWDLWWNRTLK---HTRGHLVELMNSN 75
LI ++T+ I G +GTIDG+G WW++ K + L+ +++
Sbjct: 161 LISATNVTDAAIMG-DGTIDGRGYAKLLGKDFSWWEMARKAEPKDDIYFSTRLLVASHAD 219
Query: 76 NILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAP----LNAPNTDGIDPDSSTNVCIED 131
+++ +T NSP + + G+ +L P L+A NTDGIDP SSTNV I
Sbjct: 220 GLILYRVTLHNSPNFHVAVNQTNGFTAWGVHLLTPVDKTLDARNTDGIDPGSSTNVTIAH 279
Query: 132 CYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTV 191
+I++GDD +A+K+ H + + T G+ IGSE +G F + V
Sbjct: 280 SWIDNGDDNIAIKANVKHMSV-------------LDNHFYTGHGMSIGSEATGDEF-ILV 325
Query: 192 DQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPDEGW-DP-- 248
D L +G+RIK++ RGGY ++T +NI M VK PI IS + EG+ DP
Sbjct: 326 DGLTEDHTTSGIRIKSNVTRGGYDHDLTYKNICMRGVKNPIAISPYYTNQTTEGFVDPGY 385
Query: 249 --KALPKIRGISFVNVVSVNTTKAPVL-AGIIGTQFEEICMKNVSLLGLAPSAKWQCQFV 305
+P + I N+ + TT VL AG+ EI +K V + G+ +A+ FV
Sbjct: 386 TGTKIPDYKKIRLENIYA--TTPGDVLIAGLNDDHRTEITLKGVQVAGIT-AAQTHLAFV 442
>gi|29349595|ref|NP_813098.1| exo-poly-alpha-D-galacturonosidase [Bacteroides thetaiotaomicron
VPI-5482]
gi|29341505|gb|AAO79292.1| exo-poly-alpha-D-galacturonosidase precursor [Bacteroides
thetaiotaomicron VPI-5482]
Length = 538
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 85/163 (52%), Gaps = 1/163 (0%)
Query: 54 DLWWNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNA 113
D WN R L+ + S IL+ +TF+NSP W +HP+ C + + + ++ P +
Sbjct: 227 DEEWNEIRAWLRPVLLNFVKSKRILLEGVTFKNSPSWCLHPLSCEDFTVNNIQVINPWYS 286
Query: 114 PNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTC 173
N D +D +S N I + ++GDD + +KSG D G P N+IV+ +
Sbjct: 287 QNGDALDLESCKNALILNSVFDAGDDAICIKSGKDENGRRRGEPCQNVIVKN-NTVLHGH 345
Query: 174 SGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIE 216
G +GSEMSGG+ N+ V+ G+R K+ +GRGG +E
Sbjct: 346 GGFVVGSEMSGGVKNIYVEDCTFLGTDVGLRFKSTRGRGGVVE 388
>gi|325300073|ref|YP_004259990.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324319626|gb|ADY37517.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 458
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 90/167 (53%), Gaps = 4/167 (2%)
Query: 59 RTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDG 118
R H R HL+ ++L+ R SPFWTIH C + V++ + + A + N DG
Sbjct: 198 RGENHLRPHLIHFNRCKHVLLDGFKIRQSPFWTIHLYMCNSGVVRNLDVQA--HGHNNDG 255
Query: 119 IDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGI 178
ID + S N +E C + GDD V +KSG + + P NI+VR + +GI
Sbjct: 256 IDFEMSRNFLVEHCTFDQGDDAVVIKSGRNQDAWRLNTPCENIVVRHCAIRKGHVL-LGI 314
Query: 179 GSEMSGGIFNVTVDQLHVWDAAAGV-RIKTDKGRGGYIENITIRNIK 224
GSEMSGG+ N+ + V ++ + +KT+ RGG+IENI + NI+
Sbjct: 315 GSEMSGGVRNIYMHDCTVPESVQRLFFLKTNHRRGGFIENIYLENIE 361
>gi|317056840|ref|YP_004105307.1| glycoside hydrolase family protein [Ruminococcus albus 7]
gi|315449109|gb|ADU22673.1| glycoside hydrolase family 28 [Ruminococcus albus 7]
Length = 513
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 107/216 (49%), Gaps = 8/216 (3%)
Query: 24 HISLIHGDHLTNVIITGYNGTIDGQGQM--WWDLWWNRTLKHTRGHLVELMNSNNILISN 81
H +LI ++ ++ I G G IDG + WW+ R + R L+ I +
Sbjct: 175 HQALIFAEYAEDIRIVG-RGVIDGNAEAGGWWENVKERNIPRPR--LLFFNRCKLITVHG 231
Query: 82 LTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLV 141
+T N+ W IHP + + + I AP ++PNTD +DP++ NV I C GDD +
Sbjct: 232 ITVCNAASWQIHPYFSSYLHFLDLDITAPKDSPNTDALDPEACDNVWISGCRFSVGDDCI 291
Query: 142 AVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAA 201
A+KSG G +P+ N +R V +GSEM+GG+ N+TV++
Sbjct: 292 AIKSGKIDIGRKFKQPAENHNIRNCLMQFGH-GAVTLGSEMAGGVRNLTVERCIFDHTDR 350
Query: 202 GVRIKTDKGRG--GYIENITIRNIKMERVKIPIRIS 235
G+RIKT +GRG I+ + +KM V PI I+
Sbjct: 351 GLRIKTRRGRGKDAVIDGVLFEKMKMNGVLTPIVIN 386
>gi|375100955|ref|ZP_09747218.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
gi|374661687|gb|EHR61565.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
Length = 462
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 130/263 (49%), Gaps = 42/263 (15%)
Query: 2 DEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTL 61
D P++ PS G E G + L+H + +V +TG G IDG + + W R L
Sbjct: 125 DYLPVV---PSRWEGTEMFG--YSPLLHAHRVHDVAVTG-GGLIDGNAEDGFAAW--REL 176
Query: 62 K--------------------------HTRGHLVELMNSNNILISNLTFRNSPFWTIHPV 95
+ + R +++ S+++L+ +T ++P W H +
Sbjct: 177 QGEDQQALRRMGKEGVPVEERVFGEGHYLRPSMLQFYESSDVLVEGVTIVDAPMWVNHFI 236
Query: 96 YCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIES-GDDLVAVKSGWDHYGIAM 154
Y ++ ++ +T+ + PN DG+ DSS++V +E+ + GDD V VKSG D G +
Sbjct: 237 YSDDITVRDVTV--KTHRPNNDGVAIDSSSDVLVENNDFQGIGDDCVVVKSGRDEDGRRV 294
Query: 155 ARPSSNIIVR--RVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRG 212
RPS NI+VR R+SGT G IGSEMSGG+ V V++ + + + IK + RG
Sbjct: 295 GRPSENIVVRGNRMSGTE---GGFAIGSEMSGGVNTVFVERNTMDTIGSALYIKANLDRG 351
Query: 213 GYIENITIRNIKMERVKIPIRIS 235
G +E + IR+I + + +R
Sbjct: 352 GVVERVRIRDITVGTAEKVLRFQ 374
>gi|423295815|ref|ZP_17273942.1| hypothetical protein HMPREF1070_02607 [Bacteroides ovatus
CL03T12C18]
gi|392671543|gb|EIY65015.1| hypothetical protein HMPREF1070_02607 [Bacteroides ovatus
CL03T12C18]
Length = 454
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 94/177 (53%), Gaps = 10/177 (5%)
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
H R HL+ N+L+ + R SPFWTIH C +++ + + A + N DGID +
Sbjct: 198 HLRPHLIHFNRCENVLLDSFKIRESPFWTIHMYMCNGGIVRNLDVKA--HGHNNDGIDLE 255
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
+ N +EDC + GDD V +K+G + + P+ NI++R + + +GIGSE+
Sbjct: 256 MTRNFLVEDCTFDQGDDAVVIKAGRNRDAWRLNTPTENIVIRNCN-ILEGHTLLGIGSEI 314
Query: 183 SGGIFNVTVDQLHVWDAAAGVR----IKTDKGRGGYIENITIRNIKMERVKIPIRIS 235
SGGI NV +H VR +KT+ RG ++ENI + NI+ V+ + I
Sbjct: 315 SGGIRNV---YMHDCKVPQSVRRLFFVKTNHRRGAFVENIHMENIRTGHVQRVLEID 368
>gi|423301929|ref|ZP_17279952.1| hypothetical protein HMPREF1057_03093 [Bacteroides finegoldii
CL09T03C10]
gi|408471020|gb|EKJ89552.1| hypothetical protein HMPREF1057_03093 [Bacteroides finegoldii
CL09T03C10]
Length = 546
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 85/163 (52%), Gaps = 1/163 (0%)
Query: 54 DLWWNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNA 113
D WN R L+ + S IL+ +TF+NSP W +HP+ C + + + ++ P +
Sbjct: 227 DEEWNEIRPWLRPVLLSIAKSKKILLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYS 286
Query: 114 PNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTC 173
N D ID +S N I + ++GDD + +KSG D G P N+IV+ +
Sbjct: 287 QNGDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKN-NTVLHGH 345
Query: 174 SGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIE 216
G +GSEMSGG+ N+ V+ G+R K+ +GRGG +E
Sbjct: 346 GGFVVGSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 388
>gi|253687385|ref|YP_003016575.1| glycoside hydrolase family protein [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|251753963|gb|ACT12039.1| glycoside hydrolase family 28 [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 402
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 95/277 (34%), Positives = 133/277 (48%), Gaps = 33/277 (11%)
Query: 43 GTIDGQGQM--------WWDLWWN---RTLKHTRGHLVELMNSNNILISNLTFRNSPFWT 91
G IDGQG + WWDL + + LK L+++ S N + N++ NSP +
Sbjct: 143 GIIDGQGGVKLQDKKVSWWDLAADAKVKKLKQNTPRLIQINKSKNFTLYNVSLINSPNF- 201
Query: 92 IHPVYCRNVVIKG--MTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDH 149
H V+ TI P A NTDGIDP SS N+ I I +GDD VA+K+ +
Sbjct: 202 -HVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAHSNISTGDDNVAIKA---Y 257
Query: 150 YGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDK 209
G A R S I+ G T G+ IGSE + G++NVTVD L++ G+RIK+DK
Sbjct: 258 KGRAETRNIS--ILHNEFG---TGHGMSIGSE-TMGVYNVTVDDLNMNGTTNGLRIKSDK 311
Query: 210 GRGGYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTK 269
G + I N+ M+ V PI I D E + +P I+F ++ S T
Sbjct: 312 SAAGVVNGIRYSNVVMKNVAKPIVI-----DTVYEKKEGSNVPDWSDITFKDITS-QTKG 365
Query: 270 APVLAGIIGTQFEEICMKNVSLLGLAPSAKWQCQFVS 306
VL G + E+ MKNV L + WQ + V+
Sbjct: 366 VVVLNGENAKKPIEVTMKNVK---LTSDSTWQIKNVT 399
>gi|309779639|ref|ZP_07674398.1| polygalacturonase transmembrane protein [Ralstonia sp. 5_7_47FAA]
gi|349616569|ref|ZP_08895706.1| hypothetical protein HMPREF0989_03952 [Ralstonia sp. 5_2_56FAA]
gi|308921580|gb|EFP67218.1| polygalacturonase transmembrane protein [Ralstonia sp. 5_7_47FAA]
gi|348612214|gb|EGY61836.1| hypothetical protein HMPREF0989_03952 [Ralstonia sp. 5_2_56FAA]
Length = 671
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 93/173 (53%), Gaps = 18/173 (10%)
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+ R +VE + N+L+ N N+PFW HPV+C NVVI+G+T+ + PN DG DPD
Sbjct: 339 YLRPCMVEFIGCTNVLMENYRTVNTPFWQHHPVHCTNVVIRGVTVDS--IGPNNDGFDPD 396
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWD---HYGIAMARPSSNIIVRRVSGTTPTCSGVGIG 179
+ +NV E+ +GDD +A+KSG + YG A N + G G+ +G
Sbjct: 397 ACSNVLCENVTFNTGDDCIAIKSGKNLDTGYGPAQDHVIQNCTMNSGHG------GITLG 450
Query: 180 SEMSGGIFNVTVDQL----HVWDAAA---GVRIKTDKGRGGYIENITIRNIKM 225
SEM GG+ N+ L W + +RIKT+ RGG+++N + N+ +
Sbjct: 451 SEMGGGVQNIYARNLAMLNQFWATNSLNIAIRIKTNMNRGGFVKNFYVTNVSL 503
>gi|187919562|ref|YP_001888593.1| glycoside hydrolase [Burkholderia phytofirmans PsJN]
gi|187718000|gb|ACD19223.1| glycoside hydrolase family 28 [Burkholderia phytofirmans PsJN]
Length = 671
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 95/183 (51%), Gaps = 23/183 (12%)
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+ R +VE + N+L+ N T N+PFW HP C+NVVI+G+T + PN DG DPD
Sbjct: 339 YLRPCMVEFIGCTNVLMENYTTNNTPFWQHHPTDCKNVVIRGVTTNSI--GPNNDGFDPD 396
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWD---HYGIAMARPSSNIIVRRVSGTTPTCSGVGIG 179
+ NV + +GDD +A+KSG D YG A N I+ G G+ +G
Sbjct: 397 ACNNVLCDSVTFNTGDDCIAIKSGKDLDTQYGPAQNHVIQNCIMNSGHG------GITLG 450
Query: 180 SEMSGGIFNVTVDQLHVWDA-------AAGVRIKTDKGRGGYIENITIRNIKMERVKIPI 232
SEM GG+ N+ L + + +RIKT+ RGG+ ++N +++V +P
Sbjct: 451 SEMGGGVQNIYARNLQMLNQNWATNPLNIAIRIKTNMNRGGF-----VKNFYVDKVTLPN 505
Query: 233 RIS 235
+S
Sbjct: 506 GVS 508
>gi|198276929|ref|ZP_03209460.1| hypothetical protein BACPLE_03134 [Bacteroides plebeius DSM 17135]
gi|198270454|gb|EDY94724.1| polygalacturonase (pectinase) [Bacteroides plebeius DSM 17135]
Length = 461
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 93/166 (56%), Gaps = 10/166 (6%)
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
H R HL+ NIL+ + R SPFWTIH C + V++ + + A + N DGID +
Sbjct: 188 HLRPHLIHFNRCKNILLEDFHIRQSPFWTIHLYLCNSGVVRHLDVQA--HGHNNDGIDLE 245
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRR---VSGTTPTCSGVGIG 179
S N IE+C + GDD V +K+G + + PS NI+VR ++G T +GIG
Sbjct: 246 MSRNFLIENCKFDQGDDAVVIKAGRNQDAWRLNTPSENIVVRDCDILNGHTL----LGIG 301
Query: 180 SEMSGGIFNVTVDQLHV-WDAAAGVRIKTDKGRGGYIENITIRNIK 224
SE+SGG+ N+ + + + +KT+ RGG+IENI + +I+
Sbjct: 302 SEISGGVRNIYMTRCKAPQNVHRLFFLKTNHRRGGFIENIYLEDIE 347
>gi|386080254|ref|YP_005993779.1| endo-polygalacturonase Peh [Pantoea ananatis PA13]
gi|354989435|gb|AER33559.1| endo-polygalacturonase Peh [Pantoea ananatis PA13]
Length = 410
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 132/253 (52%), Gaps = 21/253 (8%)
Query: 43 GTIDGQGQMWWDLWW---NRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRN 99
++ G+GQ WW L N K L+++ ++++I + +T +N+P + + +
Sbjct: 149 ASMAGEGQTWWQLAASAKNDEAKQNAPRLIQIDHASDITLYQITLKNAPNFHVVINDSQG 208
Query: 100 VVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSS 159
+ + G+TI P A NTDG+DP S++V + + I +GDD VA+K+G P+S
Sbjct: 209 ITLWGITIDTPATARNTDGVDPMGSSDVTLINSRISTGDDNVAIKAG--------NAPAS 260
Query: 160 NIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENIT 219
+I + ++ G+ IGSE++ G+ +V VD L + G+RIK+D+ RGG + I
Sbjct: 261 HISI--LNNQFGFGHGMSIGSEINRGVSDVLVDGLTLTGTTNGLRIKSDRSRGGQVRAIR 318
Query: 220 IRNIKMERVKIPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPV-LAGIIG 278
+N+ M+ V P+ + + H D +P R I+F N V T K + L G
Sbjct: 319 YQNVCMQNVDNPVVM----DTHYDTHASGTMIPDYRDITFDN---VKTGKGKLTLDGYSE 371
Query: 279 TQFEEICMKNVSL 291
E+ +KNV++
Sbjct: 372 VYPLEMTLKNVTV 384
>gi|255691107|ref|ZP_05414782.1| exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii DSM
17565]
gi|260623460|gb|EEX46331.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 505
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/250 (32%), Positives = 124/250 (49%), Gaps = 36/250 (14%)
Query: 5 PIIDPLPSYGRGRERLGGRHI----SLIHGDHLTNVIITGYNGTIDGQGQMWWDLWW--- 57
P I P + R R+ G + ++I+ N I+G GT+D +G+++WD +W
Sbjct: 124 PQIHHYPEF---RSRVAGIEMTWPAAVINIIDEKNASISG-EGTLDCRGKVFWDKYWEMR 179
Query: 58 ------------NRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGM 105
+ K RG LVE S++I +S T + FW +Y + I G+
Sbjct: 180 KEYEAKGLRWIVDYDCKRVRGILVE--RSSDITLSGFTLMRTGFWGCQILYSDHCTINGL 237
Query: 106 TILAPL--NAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIV 163
TI + + P+TDGID DSST+V +E+C I+ DD + +KSG D G+ + RP+ I++
Sbjct: 238 TINNNIGGHGPSTDGIDIDSSTHVLVENCDIDCNDDNICIKSGRDADGLRVNRPTEKIVI 297
Query: 164 R----RVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENIT 219
R R TC GSE SG I N+ L + +R+K+ RGG +ENI
Sbjct: 298 RNCIARKGAGLITC-----GSETSGSIRNILGYNLDAEGTSTVLRLKSAMNRGGTVENIY 352
Query: 220 IRNIKMERVK 229
+ I + V+
Sbjct: 353 MTRINAKNVQ 362
>gi|218134189|ref|ZP_03462993.1| hypothetical protein BACPEC_02079 [[Bacteroides] pectinophilus ATCC
43243]
gi|217991564|gb|EEC57570.1| polygalacturonase (pectinase) [[Bacteroides] pectinophilus ATCC
43243]
Length = 480
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 137/338 (40%), Gaps = 70/338 (20%)
Query: 2 DEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMW--------- 52
+E+P+I + Y G+ R+ R +S I NV ITG GTIDG G++W
Sbjct: 92 EEYPLI--ISDY-EGQPRI--RTVSPIMAADAQNVAITG-EGTIDGNGELWRPLKKFKVT 145
Query: 53 ---WD-----------------LWW-------------------------NRTLKHTRGH 67
WD +W+ R R
Sbjct: 146 QRQWDKFVATSPDTVIPTNEGGMWFPTVTSYDGCMEGEPSLDDPDALKKAERHYDFYRPV 205
Query: 68 LVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNV 127
+V + + +LI +T +NSP W +HP+ C N+ + I P A N DGID +S V
Sbjct: 206 MVNFVRCDRVLIDGVTLQNSPAWNVHPLLCTNLTVSNAFIKNPYYAQNGDGIDVESCQYV 265
Query: 128 CIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIF 187
I + E GDD + +KSG + G + P+ + + + G +GSEMS G+
Sbjct: 266 EIYNTKFEVGDDGICLKSGKNEIGRRIKTPTKYVYIHDCT-VMHAHGGFVVGSEMSRGMS 324
Query: 188 NVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKM-----ERVKIPIRISRGSNDHP 242
V V G+R K+ GRGG +ENI + NI M E + + S +H
Sbjct: 325 EVYVQNCAFMGTDVGIRFKSQLGRGGIVENINLENINMTGIVGEAIIFTMGYSLYKLEHE 384
Query: 243 DEGWD----PKALPKIRGISFVNVVSVNTTKAPVLAGI 276
+ D + +P R ++ N+ V A GI
Sbjct: 385 KKDEDVFVSTEDIPVFRNVNMKNITCVGAKTAFKAEGI 422
>gi|407688605|ref|YP_006803778.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii str.
'Balearic Sea AD45']
gi|407291985|gb|AFT96297.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii str.
'Balearic Sea AD45']
Length = 476
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 143/300 (47%), Gaps = 36/300 (12%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNR--TLKHT-----------------RGH 67
LI+ ++ +V ITG GTIDG Q + W+ + T H GH
Sbjct: 156 LIYALNVEDVAITG-KGTIDGNAQSAFIGWYEKQNTDMHALRKMGFDGVPVEKRQFGEGH 214
Query: 68 -----LVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
L++ ++ +L+ + T NSPFW H VY + ++ + + + L N DG+D +
Sbjct: 215 YLRPPLIQFFHAKRVLLEDYTALNSPFWVNHLVYTSHATVRRVKVESHLY--NNDGLDIE 272
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SS V ED + +GDD + +KSG D G + PS++I+ R + G+G+GSEM
Sbjct: 273 SSQFVLAEDNHFRTGDDGIVIKSGRDADGRNIGIPSTDIVAR--NNDLGGEDGIGLGSEM 330
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVK--IPIRISRGSND 240
SGGI V + + + + R K++ RGG +E + IR K+ K +++ SN
Sbjct: 331 SGGIKRVFFENNVLHEGDSAYRFKSNLDRGGRVEMVRIRGSKVASFKHLFWFQLNYPSNL 390
Query: 241 HPDEGWDPKALPK--IRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSA 298
H G P I ++ NV +V AP A + +F++I +K + + +A
Sbjct: 391 H---GNFPATYTDIIIEDLTVENVGTVLEIHAPDAAPVHNVKFKDIKIKEAEEILILENA 447
>gi|239628555|ref|ZP_04671586.1| glycoside Hydrolase [Clostridiales bacterium 1_7_47_FAA]
gi|239518701|gb|EEQ58567.1| glycoside Hydrolase [Clostridiales bacterium 1_7_47FAA]
Length = 716
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 128/265 (48%), Gaps = 21/265 (7%)
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+ R + ++ + + +L+ T +NSP W ++PV CR++ + G+T+ + + N DG DP+
Sbjct: 188 YLRPNFIQTIRCSRVLLQGFTLKNSPMWQLNPVMCRSLTVDGVTLYS--HGANNDGCDPE 245
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S V I +C ++GDD +++KSG D G P N+++ + G+ +GSEM
Sbjct: 246 SCNGVHIRNCRFDTGDDCISLKSGRDRDGRMAGIPCENVLIEN-NEFADGHGGIALGSEM 304
Query: 183 SGGIFNVTV--DQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSND 240
SGGI V ++ + +R+KT+ RGG +E++ + + M+ V G+
Sbjct: 305 SGGIRRVLAVNNRFSSPNLTYALRLKTNARRGGRVEDVILADSVMDHV-------HGAAV 357
Query: 241 HP----DEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLA- 295
H ++G + LP+ I+ N+V+ L + ++N+ + G+A
Sbjct: 358 HGTMLYEDGRNGSDLPEFHNITIENIVAHGGDYGIFLEAFDEVPVTGLTLRNIRIDGVAR 417
Query: 296 --PSAKWQCQFVSG--FTSQVFPLP 316
S W+ V + FP P
Sbjct: 418 PMRSMNWKEPVVDDVVINGKSFPRP 442
>gi|423301865|ref|ZP_17279888.1| hypothetical protein HMPREF1057_03029 [Bacteroides finegoldii
CL09T03C10]
gi|408470956|gb|EKJ89488.1| hypothetical protein HMPREF1057_03029 [Bacteroides finegoldii
CL09T03C10]
Length = 505
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 111/216 (51%), Gaps = 29/216 (13%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWW---------------NRTLKHTRGHLVELMNSNNILI 79
N I+G GT+D +G+++WD +W + K RG LVE S++I +
Sbjct: 155 NASISG-EGTLDCRGKVFWDKYWEMRKEYEAKGLRWIVDYDCKRVRGILVE--RSSDITL 211
Query: 80 SNLTFRNSPFWTIHPVYCRNVVIKGMTILAPL--NAPNTDGIDPDSSTNVCIEDCYIESG 137
S T + FW +Y + I G+TI + + P+TDGID DSST+V +E+C I+
Sbjct: 212 SGFTLMRTGFWGCQILYSDHCTINGLTINNNIGGHGPSTDGIDIDSSTHVLVENCDIDCN 271
Query: 138 DDLVAVKSGWDHYGIAMARPSSNIIVR----RVSGTTPTCSGVGIGSEMSGGIFNVTVDQ 193
DD + +KSG D G+ + RP+ I++R R TC GSE SG I N+
Sbjct: 272 DDNICIKSGRDADGLRVNRPTEKIVIRNCIARKGAGLITC-----GSETSGSIRNILGYN 326
Query: 194 LHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVK 229
L + +R+K+ RGG +ENI + I + V+
Sbjct: 327 LDAEGTSTVLRLKSAMNRGGTVENIYMTRINAKNVQ 362
>gi|239628551|ref|ZP_04671582.1| glycoside Hydrolase [Clostridiales bacterium 1_7_47_FAA]
gi|239518697|gb|EEQ58563.1| glycoside Hydrolase [Clostridiales bacterium 1_7_47FAA]
Length = 710
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 139/309 (44%), Gaps = 58/309 (18%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQM--WWDLWWNRTL---KHTR---------------- 65
LI+ + N+ +TG G +DGQ WW W+ T +TR
Sbjct: 129 LIYANGQDNIAVTG-KGRLDGQADQDTWWS-WYGDTYIGQDYTRPSSSDVGILRRMVDDG 186
Query: 66 ----------GHL-----VELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAP 110
GH ++++ N+L+ ++ +N P W ++PV C NV ++G+ +
Sbjct: 187 VDVRKRVFGEGHFLRPNFIQVIGCENVLVEGISIKNPPMWGVNPVLCTNVTVRGIEVDGN 246
Query: 111 LNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARP---SSNIIVR--R 165
N N DG +P++ V IEDC + G D VAVKSG + G + + N+++R
Sbjct: 247 FN--NNDGCNPENCNYVLIEDCRFQVGGDGVAVKSGRNRDGWELKEAGWSARNMVIRGNE 304
Query: 166 VSGTTPTCSGVGIGSEMSGGIFNVTVD--QLHVWDAAAGVRIKTDKGRGGYIENITIRNI 223
+G T SG+ GSEMSG I ++ D + +R K++ RGG +E I IR
Sbjct: 305 FAGGT---SGIAFGSEMSGDIRDIYADDNRFGTQSLDYAIRFKSNAARGGVVERIYIRGS 361
Query: 224 KMERVKIPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEE 283
+ ++ +S + DEGW LP+ R I + + T GI F++
Sbjct: 362 RASNIRY---VSIHATMLYDEGWMGSYLPEYRDIRIEDFTANGGTY-----GIFMEAFDQ 413
Query: 284 ICMKNVSLL 292
+ + + L+
Sbjct: 414 VPITGLELV 422
>gi|354594579|ref|ZP_09012618.1| hypothetical protein CIN_13140 [Commensalibacter intestini A911]
gi|353672255|gb|EHD13955.1| hypothetical protein CIN_13140 [Commensalibacter intestini A911]
Length = 430
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 96/325 (29%), Positives = 146/325 (44%), Gaps = 51/325 (15%)
Query: 26 SLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRT-----LKHT---------------- 64
+ I DH+ +V I G GTIDG GQ WW + L H
Sbjct: 99 AFILADHVHDVSIVG-QGTIDGDGQQ---TWWAKAKQINALLHQGNDQLFKQEYSGVPIA 154
Query: 65 ----RGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGID 120
R L+E + N+ + + N+P W + ++V I + I P ++PNTDGID
Sbjct: 155 NGVPRPWLIEFNDVQNVHLKGVLLTNAPMWNVVIRSSQDVNIDTIKIQNPKDSPNTDGID 214
Query: 121 PDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGS 180
SS + I D I +GDD +++KSG A P+ +I ++ + G+ IGS
Sbjct: 215 IVSSQYIQISDVDISTGDDNISIKSGLQQ---GNALPARDITIK--NSLMHDGHGISIGS 269
Query: 181 EMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRI--SRGS 238
E + GI VT+ +H + G+RIK+ + RG I IT+ +I+ME V PI I S
Sbjct: 270 ETANGIGKVTIQNIHFSGSTNGIRIKSQRDRGNSIGPITVDHIQMENVTNPIVINASYSV 329
Query: 239 NDHP----DEGWDPKAL----PKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVS 290
N + E K L P I I ++ VN + +L+G+ E + N+
Sbjct: 330 NSYKKRSFKEALKQKELTSLTPLIHDILLSDIHVVNADNSIILSGL-----PEAFIWNIV 384
Query: 291 LLGLAPSAK--WQCQFVSGFTSQVF 313
L + AK + ++V G QV
Sbjct: 385 LDHIFMQAKHGLKARYVQGVMHQVI 409
>gi|291616648|ref|YP_003519390.1| Peh [Pantoea ananatis LMG 20103]
gi|291151678|gb|ADD76262.1| Peh [Pantoea ananatis LMG 20103]
Length = 417
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 143/276 (51%), Gaps = 27/276 (9%)
Query: 25 ISLIHGDHLTNV----IITGYNG-TIDGQGQMWWDLWW---NRTLKHTRGHLVELMNSNN 76
I+L HG H + + +I G ++ G+GQ WW L N K L+++ ++++
Sbjct: 134 ITLTHG-HGSGIYGQGVIDGQGAASMAGEGQTWWQLAASARNDEAKQNAPRLIQIDHASD 192
Query: 77 ILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIES 136
I + +T +N+P + + + + + G+TI P A NTDG+DP S++V + + I +
Sbjct: 193 ITLYQITLKNAPNFHVVINDSQGITLWGITIDTPATARNTDGVDPMGSSDVTLINSRIST 252
Query: 137 GDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHV 196
GDD VA+K+G P+S+I + ++ G+ IGSE++ G+ +V VD L +
Sbjct: 253 GDDNVAIKAG--------NAPASHISI--LNNQFGFGHGMSIGSEINRGVSDVLVDGLTL 302
Query: 197 WDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDPKALPKIRG 256
G+RIK+D+ RGG + I +N+ M+ V P+ + + H D +P R
Sbjct: 303 TGTTNGLRIKSDRSRGGQVRAIRYQNVCMQNVDNPVVM----DTHYDTHASGTMIPDYRD 358
Query: 257 ISFVNVVSVNTTKAPV-LAGIIGTQFEEICMKNVSL 291
I+F N V T K + L G E+ +KNV++
Sbjct: 359 ITFDN---VKTGKGKLTLDGYSEVYPLEMTLKNVTV 391
>gi|227327233|ref|ZP_03831257.1| endo-polygalacturonase [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 402
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 94/277 (33%), Positives = 133/277 (48%), Gaps = 33/277 (11%)
Query: 43 GTIDGQGQM--------WWDLWWN---RTLKHTRGHLVELMNSNNILISNLTFRNSPFWT 91
GTIDGQG + WWDL + + LK L+++ S N + N++ NSP +
Sbjct: 143 GTIDGQGGVKLQDEKVSWWDLAADAKVKKLKQNTPRLIQINKSKNFTLYNVSLINSPNF- 201
Query: 92 IHPVYCRNVVIKG--MTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDH 149
H V+ TI P A NTDGIDP SS N+ I I +GDD VA+K+ +
Sbjct: 202 -HVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAHSNISTGDDNVAIKA---Y 257
Query: 150 YGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDK 209
G + R S I+ G T G+ IGSE + G++NVTVD L + G+RIK+DK
Sbjct: 258 KGRSETRNIS--ILHNEFG---TGHGMSIGSE-TMGVYNVTVDDLIMTGTTNGLRIKSDK 311
Query: 210 GRGGYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTK 269
G + + N+ M+ V PI I D E + +P I+F ++ S T
Sbjct: 312 SAAGVVNGVRYSNVVMKNVAKPIVI-----DTVYEKKEGSNVPDWSDITFKDITS-QTKG 365
Query: 270 APVLAGIIGTQFEEICMKNVSLLGLAPSAKWQCQFVS 306
VL G + E+ MKNV L + WQ + V+
Sbjct: 366 VVVLNGENAKKPIEVTMKNVK---LTSDSTWQIKNVT 399
>gi|378768157|ref|YP_005196628.1| Endopolygalacturonase [Pantoea ananatis LMG 5342]
gi|365187641|emb|CCF10591.1| Endopolygalacturonase [Pantoea ananatis LMG 5342]
Length = 417
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 143/276 (51%), Gaps = 27/276 (9%)
Query: 25 ISLIHGDHLTNV----IITGYNG-TIDGQGQMWWDLWW---NRTLKHTRGHLVELMNSNN 76
I+L HG H + + +I G ++ G+GQ WW L N K L+++ ++++
Sbjct: 134 ITLTHG-HGSGIYGQGVIDGQGAASMAGEGQTWWQLAARAKNDEAKQNAPRLIQIDHASD 192
Query: 77 ILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIES 136
I + +T +N+P + + + + + G+TI P A NTDG+DP S++V + + I +
Sbjct: 193 ITLYQITLKNAPNFHVVINDSQGITLWGITIDTPATARNTDGVDPMGSSDVTLINSRIST 252
Query: 137 GDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHV 196
GDD VA+K+G P+S+I + ++ G+ IGSE++ G+ +V VD L +
Sbjct: 253 GDDNVAIKAG--------NAPASHISI--LNNQFGFGHGMSIGSEINRGVSDVLVDGLTL 302
Query: 197 WDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDPKALPKIRG 256
G+RIK+D+ RGG + I +N+ M+ V P+ + + H D +P R
Sbjct: 303 TGTTNGLRIKSDRSRGGQVRAIRYQNVCMQNVDNPVVM----DTHYDTHASGTMIPDYRD 358
Query: 257 ISFVNVVSVNTTKAPV-LAGIIGTQFEEICMKNVSL 291
I+F N V T K + L G E+ +KNV++
Sbjct: 359 ITFDN---VKTGKGKLTLDGYSEVYPLEMTLKNVTV 391
>gi|386015018|ref|YP_005933295.1| endo-polygalacturonase precursor Peh [Pantoea ananatis AJ13355]
gi|327393077|dbj|BAK10499.1| endo-polygalacturonase precursor Peh [Pantoea ananatis AJ13355]
Length = 290
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 132/252 (52%), Gaps = 21/252 (8%)
Query: 44 TIDGQGQMWWDLWW---NRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNV 100
++ G+GQ WW L N K L+++ ++++I + +T +N+P + + + +
Sbjct: 30 SMAGEGQTWWQLAASARNDEAKQNAPRLIQIDHASDITLYQITLKNAPNFHVVINDSQGI 89
Query: 101 VIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSN 160
+ G+TI P A NTDG+DP S++V + + I +GDD VA+K+G P+S+
Sbjct: 90 TLWGITIDTPATARNTDGVDPMGSSDVTLINSRISTGDDNVAIKAG--------NAPASH 141
Query: 161 IIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITI 220
I + ++ G+ IGSE++ G+ +V VD L + G+RIK+D+ RGG + I
Sbjct: 142 ISI--LNNQFGFGHGMSIGSEINRGVSDVLVDGLTLTGTTNGLRIKSDRSRGGQVRAIRY 199
Query: 221 RNIKMERVKIPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPV-LAGIIGT 279
+N+ M+ V P+ + + H D +P R I+F N V T K + L G
Sbjct: 200 QNVCMQNVDNPVVM----DTHYDTHASGTMIPDYRDITFDN---VKTGKGKLTLDGYSEV 252
Query: 280 QFEEICMKNVSL 291
E+ +KNV++
Sbjct: 253 YPLEMTLKNVTV 264
>gi|129933|sp|P18192.1|PGLR1_PECCC RecName: Full=Endo-polygalacturonase; Flags: Precursor
gi|42330|emb|CAA37119.1| precursor protein (AA -26 to 376) [Pectobacterium carotovorum]
Length = 402
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 94/277 (33%), Positives = 133/277 (48%), Gaps = 33/277 (11%)
Query: 43 GTIDGQGQM--------WWDLWWN---RTLKHTRGHLVELMNSNNILISNLTFRNSPFWT 91
GTIDGQG + WWDL + + LK L+++ S N + N++ NSP +
Sbjct: 143 GTIDGQGGVKLQDKKVSWWDLAADAKVKKLKQNTPRLIQINKSKNFTLYNVSLINSPNF- 201
Query: 92 IHPVYCRNVVIKG--MTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDH 149
H V+ TI P A NTDGIDP SS N+ I I +GDD VA+K+ +
Sbjct: 202 -HVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAHSNISTGDDNVAIKA---Y 257
Query: 150 YGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDK 209
G + R S I+ G T G+ IGSE + G++NVTVD L + G+RIK+DK
Sbjct: 258 KGRSETRNIS--ILHNEFG---TGHGMSIGSE-TMGVYNVTVDDLIMTGTTNGLRIKSDK 311
Query: 210 GRGGYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTK 269
G + + N+ M+ V PI I D E + +P I+F ++ S T
Sbjct: 312 SAAGVVNGVRYSNVVMKNVAKPIVI-----DTVYEKKEGSNVPDWSDITFKDITS-QTKG 365
Query: 270 APVLAGIIGTQFEEICMKNVSLLGLAPSAKWQCQFVS 306
VL G + E+ MKNV L + WQ + V+
Sbjct: 366 VVVLNGENAKKPIEVTMKNVK---LTSDSTWQIKNVT 399
>gi|148472|gb|AAA03624.1| polygalacturonase [Pectobacterium carotovorum]
Length = 402
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 94/276 (34%), Positives = 132/276 (47%), Gaps = 33/276 (11%)
Query: 43 GTIDGQGQM--------WWDLWWN---RTLKHTRGHLVELMNSNNILISNLTFRNSPFWT 91
GTIDGQG + WWDL + + LK L+++ S N + N++ NSP +
Sbjct: 143 GTIDGQGGVKLQDKKVSWWDLAADAKVKKLKQNTPRLIQINKSKNFTLYNVSLINSPNF- 201
Query: 92 IHPVYCRNVVIKG--MTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDH 149
H V+ TI P A NTDGIDP SS N+ I I +GDD VA+K+ +
Sbjct: 202 -HVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAHSNISTGDDNVAIKA---Y 257
Query: 150 YGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDK 209
G + R S I+ G T G+ IGSE + G++NVTVD L + G+RIK+DK
Sbjct: 258 KGRSETRNIS--ILHNEFG---TGHGMSIGSE-TMGVYNVTVDDLVMTGTTNGLRIKSDK 311
Query: 210 GRGGYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTK 269
G + + N+ M+ V PI I D E + +P I+F ++ S T
Sbjct: 312 SAAGVVNGVRYSNVVMKNVAKPIVI-----DTVYEKKEGSNVPDWSDITFKDITS-QTKG 365
Query: 270 APVLAGIIGTQFEEICMKNVSLLGLAPSAKWQCQFV 305
VL G + E+ MKNV L + WQ + V
Sbjct: 366 VVVLNGENAKKPIEVTMKNVK---LTSDSTWQIKNV 398
>gi|383816572|ref|ZP_09971967.1| hypothetical protein SPM24T3_19510 [Serratia sp. M24T3]
gi|383294566|gb|EIC82905.1| hypothetical protein SPM24T3_19510 [Serratia sp. M24T3]
Length = 415
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 133/281 (47%), Gaps = 38/281 (13%)
Query: 38 ITGYNGTIDGQG--------QMWWDLWWNRTLKHTRGH---LVELMNSNNILISNLTFRN 86
ITG +G IDG+G + WW L +H R + L+E+ ++ N++ + N
Sbjct: 141 ITG-DGEIDGRGGQLMKGRNESWWQLARRAQKEHRRQNTPRLIEIEHARNLVFYRIRLVN 199
Query: 87 SPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSG 146
SP + + + + + G+TI AP A NTDGIDP ++T+V I I +GDD VA+K+G
Sbjct: 200 SPNFHMAMNHVEGITVWGVTINAPATARNTDGIDPGAATDVTIAHSIISTGDDDVAIKAG 259
Query: 147 WDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIK 206
+ + + G+ IGSE S G+ +V V+ L + +G+RIK
Sbjct: 260 ---------SGCGSRFISIIDNHFYAGHGMSIGSETSAGVSDVLVNGLTLDGTTSGLRIK 310
Query: 207 TDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDPKA----LPKIRGISFVNV 262
+D RGG + N+ NI + + PI D +DP A +P+ + I+ VN+
Sbjct: 311 SDVSRGGLVNNLDFENITLHHNRWPINF--------DTRYDPDAKGNLIPQFQNITLVNI 362
Query: 263 VSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQCQ 303
+ ++ G + +KNV A+W+ +
Sbjct: 363 RG--GSGVMIMRGYDPAHPLSVTLKNVH---FDKEARWEVE 398
>gi|317505480|ref|ZP_07963398.1| polygalacturonase [Prevotella salivae DSM 15606]
gi|315663393|gb|EFV03142.1| polygalacturonase [Prevotella salivae DSM 15606]
Length = 494
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/244 (32%), Positives = 111/244 (45%), Gaps = 44/244 (18%)
Query: 25 ISLIHGDHLTNVIITGYNGTIDGQGQMWW---------------------------DLWW 57
+S I TN+ ITG GTIDG GQ WW DLW+
Sbjct: 154 VSGITASKRTNISITG-EGTIDGNGQ-WWRPVKRVKMSDVEWNQYKAMGGTITPKGDLWY 211
Query: 58 NRTLK-------------HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKG 104
LK R HL+ + NN+LI +T +NSP + I P C NV++ G
Sbjct: 212 PFNLKTQENIAPNASEQEKMRAHLIRITECNNVLIQGVTIQNSPRFHIVPQRCNNVIVDG 271
Query: 105 MTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVR 164
+T+ P NA N DGID + +NV I + + GDD + +KSG + R NI ++
Sbjct: 272 ITVRCPWNAQNGDGIDVGNCSNVLIVNSTFDVGDDAICMKSGAEKAD-QTNRSCVNINIQ 330
Query: 165 RVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIK 224
+ G IGSE+ GG+ N+ V+ G+R K+ GRGG E+I I N
Sbjct: 331 N-NTVYHGHGGFVIGSEVIGGMKNIYVNNNFFSGTDTGLRFKSAVGRGGKTEDIFINNCY 389
Query: 225 MERV 228
M +
Sbjct: 390 MNNI 393
>gi|365122655|ref|ZP_09339556.1| hypothetical protein HMPREF1033_02902 [Tannerella sp.
6_1_58FAA_CT1]
gi|363642403|gb|EHL81761.1| hypothetical protein HMPREF1033_02902 [Tannerella sp.
6_1_58FAA_CT1]
Length = 427
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/249 (33%), Positives = 130/249 (52%), Gaps = 36/249 (14%)
Query: 1 MDEWPIIDPLPSYGRGRERLGG---------RHISLIHGDHLTNVIITGYNGTIDGQGQM 51
+D+ I+ LP YG+G + G R+ LI G + N+ ++G G I+G G
Sbjct: 89 LDDGCILKALP-YGKGNGIVEGSYPNNGKPDRYAHLISGKRVQNIKVSG-KGVIEGDGSA 146
Query: 52 WWDLW-WNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCR---NVVIKGMTI 107
WW + NR++K RG L+ N NI I + +N+P +H R ++ ++ +TI
Sbjct: 147 WWTAFRANRSIK--RGCLIRFDNCRNIEICGIRLQNAP--NVHITLGRGSSDITVRDITI 202
Query: 108 LAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVS 167
AP APN+DGID + NV I +C I GDD +A+ SG + NI +R+ +
Sbjct: 203 EAPDEAPNSDGIDV-WAPNVLIYNCNIACGDDNIAMDSG-----------TKNITIRKCN 250
Query: 168 -GTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKME 226
G CS IGS + GI NV VD + + +R+K+++ RGG +NI NI ++
Sbjct: 251 FGNGHGCS---IGS-YTAGIENVLVDSCSFKNTESAIRMKSNRSRGGGEKNIIYSNITID 306
Query: 227 RVKIPIRIS 235
V+ PI I+
Sbjct: 307 NVRKPIFIT 315
>gi|282601137|ref|ZP_05980861.2| glycoside hydrolase, family 77 [Subdoligranulum variabile DSM
15176]
gi|282569962|gb|EFB75497.1| polygalacturonase (pectinase) [Subdoligranulum variabile DSM 15176]
Length = 531
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 93/307 (30%), Positives = 145/307 (47%), Gaps = 53/307 (17%)
Query: 30 GDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKHTRGHLVE------------------- 70
G + NV+I G GTI G G+ D +H + +L E
Sbjct: 216 GYNCVNVVIRG-KGTIAGGGKALADAIIADEREHLKDYLAEHLDLVESCDEEDTIPGRVR 274
Query: 71 -----LMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSST 125
L N N+ IS LT ++SP W + +Y N+V + N DG DPDSST
Sbjct: 275 PRLVNLSNCQNVWISGLTLKDSPSWILQMIYSDNIVTDHCAFHSE-GIWNGDGWDPDSST 333
Query: 126 NVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIV---RRVSGTTPTCSGVGIGSEM 182
N + + +GDD VA+KSG + G A+ RPS++I + R SG G+ IGSEM
Sbjct: 334 NCTLFASELYTGDDSVAIKSGKNPEGNAIGRPSAHIYIFDCRVGSG-----QGLCIGSEM 388
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHP 242
SGG+ +V + + ++ +G+ IK RGGY+ +T+R+ K RV I + +
Sbjct: 389 SGGVEDVQIWDCDLENSFSGLEIKATAKRGGYVRGVTVRDCKAPRVMIH------AVPYN 442
Query: 243 DEGWDPKALPKIRGISFVNVV----SVNTTK-----APV-LAGIIGTQFEEICMKNVSLL 292
D+G +P + +F + ++N+ + +PV LAG G +++V+
Sbjct: 443 DDGEAADTVPVLEHFTFAGLTLTGRALNSKQEWKDVSPVELAGFEGPNG---TLRDVNFD 499
Query: 293 GLAPSAK 299
GL +AK
Sbjct: 500 GLTITAK 506
>gi|325103067|ref|YP_004272721.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324971915|gb|ADY50899.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 528
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 85/154 (55%), Gaps = 2/154 (1%)
Query: 72 MNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIED 131
+N NILI ++ +PFW + P+YC NV+I+G+T+ + + P DGID +SS NV IE
Sbjct: 232 INCKNILIEGISLERTPFWNVVPIYCENVIIRGITVNS-VGIPRGDGIDIESSKNVLIEY 290
Query: 132 CYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTV 191
C + GDD +K+G G+ + +P+ N++V R G+ +GSE + I N+ V
Sbjct: 291 CTLSCGDDCFTMKAGRGEDGLRVNKPTENVVV-RFCLAKEGHGGITVGSETAAKINNLYV 349
Query: 192 DQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKM 225
D G+R KT + RGG N I+M
Sbjct: 350 HDTVFDDTGVGIRFKTRRPRGGGGANYYYERIRM 383
>gi|406597664|ref|YP_006748794.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii ATCC
27126]
gi|406374985|gb|AFS38240.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii ATCC
27126]
Length = 476
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 139/292 (47%), Gaps = 36/292 (12%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNR--TLKHT-----------------RGH 67
LI+ ++ +V ITG GTIDG Q + W+ + T H GH
Sbjct: 156 LIYALNVEDVAITG-KGTIDGNAQSAFIGWYEKQNTDMHALRKMGFDGVPVEKRQFGEGH 214
Query: 68 -----LVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
L++ ++ +L+ + T NSPFW H VY + ++ + + + L N DG+D +
Sbjct: 215 YLRPPLIQFFHAKRVLLEDYTALNSPFWVNHLVYTSHATVRRVKVESHLY--NNDGLDIE 272
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SS V ED + +GDD + +KSG D G + PS++I+ R + G+G+GSEM
Sbjct: 273 SSQFVLAEDNHFRTGDDGIVIKSGRDADGRNIGIPSTDIVAR--NNDLGGEDGIGLGSEM 330
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVK--IPIRISRGSND 240
SGGI V + + + + R K++ RGG +E + IR K+ K +++ SN
Sbjct: 331 SGGIKRVFFENNVLHEGDSAYRFKSNLDRGGRVEMVRIRGSKVASFKHLFWFQLNYPSNL 390
Query: 241 HPDEGWDPKALPK--IRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVS 290
H G P I ++ NV +V AP A + +F++I +K
Sbjct: 391 H---GNFPATYTDIIIEDLTVENVGTVLEIHAPDAAPVNNVKFKDIKIKEAE 439
>gi|4185608|dbj|BAA74431.1| Peh [Pectobacterium carotovorum]
Length = 402
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 94/276 (34%), Positives = 132/276 (47%), Gaps = 33/276 (11%)
Query: 43 GTIDGQGQM--------WWDLWWN---RTLKHTRGHLVELMNSNNILISNLTFRNSPFWT 91
GTIDGQG + WWDL + + LK L+++ S N + N++ NSP +
Sbjct: 143 GTIDGQGGVKLQDKKVSWWDLAADAKVKKLKQNTPRLIQINKSKNFTLYNVSLINSPNF- 201
Query: 92 IHPVYCRNVVIKG--MTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDH 149
H V+ TI P A NTDGIDP SS N+ I I +GDD VA+K+ +
Sbjct: 202 -HVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAHSNISTGDDNVAIKA---Y 257
Query: 150 YGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDK 209
G + R S I+ G T G+ IGSE + G++NVTVD L + G+RIK+DK
Sbjct: 258 KGRSETRNIS--ILHNEFG---TGHGMSIGSE-TMGVYNVTVDDLVMTGTTNGLRIKSDK 311
Query: 210 GRGGYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTK 269
G + + N+ M+ V PI I D E + +P I+F ++ S T
Sbjct: 312 SAAGVVNGVRYSNVVMKNVAKPIVI-----DTVYEKKEGSNVPDWSDITFKDITS-QTKG 365
Query: 270 APVLAGIIGTQFEEICMKNVSLLGLAPSAKWQCQFV 305
VL G + E+ MKNV L + WQ + V
Sbjct: 366 VVVLNGENAKKPIEVTMKNVK---LTSDSTWQIKNV 398
>gi|445494990|ref|ZP_21462034.1| pectin lyase fold-containing protein [Janthinobacterium sp. HH01]
gi|444791151|gb|ELX12698.1| pectin lyase fold-containing protein [Janthinobacterium sp. HH01]
Length = 615
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 97/173 (56%), Gaps = 18/173 (10%)
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+ R +++L+ N+L+ ++PFW HPV+CRN+VI+ + + PN+DG DP+
Sbjct: 303 YLRPPMIQLIGCTNVLLQGYHVTHTPFWQHHPVHCRNIVIRNVHCESL--GPNSDGFDPE 360
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWD---HYGIAMARPSSNIIVRRVSGTTPTCSGVGIG 179
+ +V I+ C ++GDD +A+K+G D YG PS NI+++ + + V +G
Sbjct: 361 ACDHVLIDGCTFDTGDDCIAIKAGKDLDTQYG-----PSQNIVIQNCTMQSGH-GAVTLG 414
Query: 180 SEMSGGIFNVTVDQLHVWD-------AAAGVRIKTDKGRGGYIENITIRNIKM 225
SEM+GGI NV L + +R+KT+ RGGY+ N +R+I +
Sbjct: 415 SEMAGGIQNVYAQNLVFQNINWATNPLNTAIRLKTNLNRGGYLRNFYVRDISI 467
>gi|383114381|ref|ZP_09935145.1| hypothetical protein BSGG_1446 [Bacteroides sp. D2]
gi|313693911|gb|EFS30746.1| hypothetical protein BSGG_1446 [Bacteroides sp. D2]
Length = 460
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 89/166 (53%), Gaps = 10/166 (6%)
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
H R HL+ N+L+ R SPFWTIH C +++ + + A + N DGID +
Sbjct: 204 HLRPHLIHFNRCKNVLLDGFKIRESPFWTIHLYMCDGGLVRNLDVKA--HGHNNDGIDFE 261
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S N +EDC + GDD V +K+G + + P NI++R + +GIGSE+
Sbjct: 262 MSRNFLVEDCSFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRNCQ-ILKGHTLLGIGSEI 320
Query: 183 SGGIFNVTVDQLHVWDAAAGVR----IKTDKGRGGYIENITIRNIK 224
SGGI N+ +H A V +KT+ RGG+IEN+ ++N+K
Sbjct: 321 SGGIRNI---YMHDCTAPNSVMRLFFVKTNHRRGGFIENVYMKNVK 363
>gi|224536297|ref|ZP_03676836.1| hypothetical protein BACCELL_01169 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522091|gb|EEF91196.1| hypothetical protein BACCELL_01169 [Bacteroides cellulosilyticus
DSM 14838]
Length = 473
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 137/300 (45%), Gaps = 47/300 (15%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWWNRTLKHTRGHL-------------VELMNSNNILISN 81
N I+G +G I+G+G+++WD +WN + L + + N+ + +
Sbjct: 144 NAAISG-DGVINGRGKVFWDKYWNMREDYEAKGLRWIVDYDCERPRGILIAECENVTVRD 202
Query: 82 LTFRNSPFWTIHPVYCRNVVIKGMTILAPL--NAPNTDGIDPDSSTNVCIEDCYIESGDD 139
+ FW++H +Y +++ I G+ I + + P+TDGID DSS + +++ I DD
Sbjct: 203 IVLYQPGFWSLHILYSKHITIDGIIISNNIEGHGPSTDGIDIDSSEYILVQNANINCNDD 262
Query: 140 LVAVKSGWDHYGIAMARPSSNIIVRRV----SGTTPTCSGVGIGSEMSGGIFNVTVDQLH 195
+K+G D G+ + RP +++R G TC GSE SGGI N+ ++
Sbjct: 263 NFCLKAGRDSDGLRVNRPCQYVVIRDCVAGSGGGMFTC-----GSETSGGIRNIVAYRMK 317
Query: 196 VWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSN-----DHPDEGWDPKA 250
G+R K+ RGG IE+I + +I+M V+ P + N +G+D +
Sbjct: 318 GVGTKCGLRFKSTCQRGGVIEDIYLYDIEMIGVERPFVVDLNWNPAYSISKLPKGYDMEK 377
Query: 251 L-----------------PKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLG 293
+ P R ++ NV + N + GI ++ E ++NV + G
Sbjct: 378 IPVYWSKMLESVSLEQGTPVFRNVTLDNVTASNARTCMNVVGIANSKIENFILRNVCIEG 437
>gi|160884725|ref|ZP_02065728.1| hypothetical protein BACOVA_02714 [Bacteroides ovatus ATCC 8483]
gi|156109760|gb|EDO11505.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
Length = 527
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 107/213 (50%), Gaps = 10/213 (4%)
Query: 72 MNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIED 131
+N N+LI +T S FW + P+YC NV+I+G+T+ + + P+ DGID +S NV IE
Sbjct: 208 INCTNVLIEGITMERSTFWNVCPIYCENVIIRGITVNS-IGIPSGDGIDIESCKNVLIEY 266
Query: 132 CYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTV 191
C + GDD +K+G G+ + +P+ N+++ R S GV GSE +GG+ NV V
Sbjct: 267 CTLNCGDDCFTLKAGRAEDGLRVGKPTENVVI-RYSLAQQGHGGVTCGSETAGGVKNVYV 325
Query: 192 DQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKM----ERVKIPIRISRGSNDHPDEGWD 247
G+R KT + R G + + I+M E K + S+ E +
Sbjct: 326 HDCVFDGTQIGIRFKTRRNRAGGVNDALYEKIRMINVGEAFKWDLLGSKRYVGELAERYP 385
Query: 248 PKAL----PKIRGISFVNVVSVNTTKAPVLAGI 276
P+A+ P I+ I N + + K + GI
Sbjct: 386 PRAVNKLTPTIKDIHIKNFIVESAEKILSVNGI 418
>gi|325298782|ref|YP_004258699.1| Polygalacturonase [Bacteroides salanitronis DSM 18170]
gi|324318335|gb|ADY36226.1| Polygalacturonase [Bacteroides salanitronis DSM 18170]
Length = 535
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 120/250 (48%), Gaps = 17/250 (6%)
Query: 57 WNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNT 116
WN R L+ + +L+ +TF+NSP W +HP+ C ++ + +++ P + N
Sbjct: 230 WNSIRDWLRPVLLSFIKCKKVLLEGVTFKNSPSWCLHPLSCEDLTVYNISVSNPWYSQNG 289
Query: 117 DGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGV 176
D +D +S V + + ++GDD + +KSG D G P NII+R + G
Sbjct: 290 DALDIESCNRVLVLNSSFDAGDDGICIKSGKDESGRRRGEPCQNIIIRD-NVVLHGHGGF 348
Query: 177 GIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERV---KIPIR 233
+GSEMSGG+ N+ VD G+R K+ +GRGG +ENI I NI M + +
Sbjct: 349 VVGSEMSGGVKNIYVDNCTFLGTDVGLRFKSTRGRGGVVENIHINNINMINIPNEALIFD 408
Query: 234 ISRGSNDHPDEGWDPKA------------LPKIRGISFVNVVSVNTTKAPVLAGIIGTQF 281
+ G N P EG P A P R I NV + N +A + G+
Sbjct: 409 LFYGGN-APGEGDAPGAPKEEVVPPVTEETPAFRDIFIKNVTAKNVGRAVLFNGLPEMPI 467
Query: 282 EEICMKNVSL 291
+ I ++NV++
Sbjct: 468 KNIFLENVTI 477
>gi|427387343|ref|ZP_18883399.1| hypothetical protein HMPREF9447_04432 [Bacteroides oleiciplenus YIT
12058]
gi|425725504|gb|EKU88375.1| hypothetical protein HMPREF9447_04432 [Bacteroides oleiciplenus YIT
12058]
Length = 923
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 85/158 (53%), Gaps = 2/158 (1%)
Query: 72 MNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIED 131
+N N+ I +T S W + P YC NV+I+G+T+ + L P DGID +SS NV IE
Sbjct: 211 INCTNVFIEGITMNRSALWNVVPTYCENVIIRGITVNS-LEIPRGDGIDIESSKNVLIEY 269
Query: 132 CYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTV 191
C + + DD +KSG G+ + RP++N+++R S T G+ GSE +G I N+
Sbjct: 270 CTLNTHDDCFTLKSGRGEEGVHIGRPTANVVIRH-SLATNGPGGITCGSETAGNIKNIYA 328
Query: 192 DQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVK 229
G+ KT + RGG EN+ I+M VK
Sbjct: 329 HDCVFKGTMTGILFKTRRPRGGGTENVLYERIRMIDVK 366
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 73/132 (55%), Gaps = 12/132 (9%)
Query: 26 SLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNR--------TLKHTRGHLVELMNSNNI 77
+L++ D + ++G GTI+G G +W +W R + R L+ + NS N+
Sbjct: 626 ALLNADEVDGFTVSG-KGTINGNGMRYWKSFWLRREVNPKCTNMDELRPRLLYVSNSKNV 684
Query: 78 LISNLTFRNSPFWTIHPVYCRNVVIKGMTILAP---LNAPNTDGIDPDSSTNVCIEDCYI 134
IS + NSPFWT H C + + + I +P ++AP+TDG+D D TNV I++CYI
Sbjct: 685 QISGVRLINSPFWTTHFYKCEQLRLLNLHITSPTSPVHAPSTDGVDIDVCTNVLIKNCYI 744
Query: 135 ESGDDLVAVKSG 146
DD +A+K G
Sbjct: 745 SVDDDGIALKGG 756
>gi|289164747|ref|YP_003454885.1| hypothetical protein LLO_1410 [Legionella longbeachae NSW150]
gi|288857920|emb|CBJ11775.1| Hypothetical protein, similar to eukaryotic polygalacturonase
[Legionella longbeachae NSW150]
Length = 401
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 142/289 (49%), Gaps = 37/289 (12%)
Query: 25 ISLIHGDHLTNVIITGYN---GTIDGQGQMWWDLWWNRTLKHTRGHLVELMNSNNILISN 81
I+LIH +H T ++G N IDG G+ WW R L+ L + N+ I +
Sbjct: 124 INLIHVNHFT---LSGDNPDTSVIDGNGEGWWKY----KTSQNRPFLLHLNHVENLTIDH 176
Query: 82 LTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLV 141
L +NSP + I +NV + + I AP ++PNTDGI+ S T + I + I++GDD +
Sbjct: 177 LQLKNSPRFHIMLRGGKNVAVHDLRIDAPQDSPNTDGINVGSITKMQINNIIIKNGDDGI 236
Query: 142 AVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAA 201
A+ A+ PS NI + V GV IGS + + ++ V+ L +A+
Sbjct: 237 AIN--------AINEPSKNIKISNVD--LFYGHGVSIGSGVKNTVSDIMVNNLSFHNASN 286
Query: 202 GVRIKT--DKG-----RGGYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDPKALPKI 254
G+RIKT DK + G + +IT +I ME VK PI ++ + G K+ I
Sbjct: 287 GLRIKTRCDKKDCSDTKKGAVTDITYSDITMENVKYPILYDM---EYSETG--SKSYVTI 341
Query: 255 RGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQCQ 303
+ I++ N+ S+N++K + + I KNV++ + QCQ
Sbjct: 342 KDITYQNIYSINSSKEARIFCGKYNKCSTIIFKNVNI-----DSGMQCQ 385
>gi|198277537|ref|ZP_03210068.1| hypothetical protein BACPLE_03759 [Bacteroides plebeius DSM 17135]
gi|198270035|gb|EDY94305.1| polygalacturonase (pectinase) [Bacteroides plebeius DSM 17135]
Length = 466
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 84/254 (33%), Positives = 127/254 (50%), Gaps = 31/254 (12%)
Query: 22 GRHISLIHGDHLTNVIITGYNGTIDGQGQ--MWWDLWWNRTLK-----HTRGHLVELMNS 74
G + I G L NV ITG GT+DG G M +L + LK R HL+ L N
Sbjct: 109 GEGMMWISGKDLKNVSITG-TGTLDGNGVAFMGKELEDSYELKPVTDFDPRPHLLTLTNV 167
Query: 75 NNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYI 134
++I +++ RNS +W++H + CRN +I G+TIL L N DGID D S +V I +C+I
Sbjct: 168 QKLVIRDISVRNSAYWSVHLIGCRNAMIDGITILNDLKIRNGDGIDIDHSKDVRISNCFI 227
Query: 135 ESGDDLVAVKS--GWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVD 192
ESGDD + +K+ ++ YG +++V + T+ +C+ V IGSE I NV
Sbjct: 228 ESGDDCICLKNRREFEQYG-----SCEDVVVTNCTMTSRSCA-VKIGSENMDKINNVLFT 281
Query: 193 QLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKI---------PIRIS---RGSND 240
+ D+ G+ I+ G + N+ N+ ++ PI ++ R +
Sbjct: 282 NCIIKDSNRGIGIQNRD--EGTVTNVIFSNMIVDCRFFSDVWWGKAEPIYVTSYPRAVGN 339
Query: 241 HPDEGWD-PKALPK 253
H D GW PK K
Sbjct: 340 HKDAGWRFPKGAVK 353
>gi|160886940|ref|ZP_02067943.1| hypothetical protein BACOVA_04954 [Bacteroides ovatus ATCC 8483]
gi|237721224|ref|ZP_04551705.1| pectate lyase [Bacteroides sp. 2_2_4]
gi|423288954|ref|ZP_17267805.1| hypothetical protein HMPREF1069_02848 [Bacteroides ovatus
CL02T12C04]
gi|423294898|ref|ZP_17273025.1| hypothetical protein HMPREF1070_01690 [Bacteroides ovatus
CL03T12C18]
gi|156107351|gb|EDO09096.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|229449020|gb|EEO54811.1| pectate lyase [Bacteroides sp. 2_2_4]
gi|392668718|gb|EIY62212.1| hypothetical protein HMPREF1069_02848 [Bacteroides ovatus
CL02T12C04]
gi|392676089|gb|EIY69530.1| hypothetical protein HMPREF1070_01690 [Bacteroides ovatus
CL03T12C18]
Length = 461
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 89/166 (53%), Gaps = 10/166 (6%)
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
H R HL+ N+L+ R SPFWTIH C +++ + + A + N DGID +
Sbjct: 205 HLRPHLIHFNRCKNVLLDGFKIRESPFWTIHLYMCDGGLVRNLDVKA--HGHNNDGIDFE 262
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S N +EDC + GDD V +K+G + + P NI++R + +GIGSE+
Sbjct: 263 MSRNFLVEDCSFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRNCQ-ILKGHTLLGIGSEI 321
Query: 183 SGGIFNVTVDQLHVWDAAAGVR----IKTDKGRGGYIENITIRNIK 224
SGGI N+ +H A V +KT+ RGG+IEN+ ++N+K
Sbjct: 322 SGGIRNI---YMHDCTAPNSVMRLFFVKTNHRRGGFIENVYMKNVK 364
>gi|299148459|ref|ZP_07041521.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
gi|298513220|gb|EFI37107.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
Length = 461
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 89/166 (53%), Gaps = 10/166 (6%)
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
H R HL+ N+L+ R SPFWTIH C +++ + + A + N DGID +
Sbjct: 205 HLRPHLIHFNRCKNVLLDGFKIRESPFWTIHLYMCDGGLVRNLDVKA--HGHNNDGIDFE 262
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S N +EDC + GDD V +K+G + + P NI++R + +GIGSE+
Sbjct: 263 MSRNFLVEDCSFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRNCQ-ILKGHTLLGIGSEI 321
Query: 183 SGGIFNVTVDQLHVWDAAAGVR----IKTDKGRGGYIENITIRNIK 224
SGGI N+ +H A V +KT+ RGG+IEN+ ++N+K
Sbjct: 322 SGGIRNI---YMHDCTAPNSVMRLFFVKTNHRRGGFIENVYMKNVK 364
>gi|270156809|ref|ZP_06185466.1| conserved hypothetical protein [Legionella longbeachae D-4968]
gi|269988834|gb|EEZ95088.1| conserved hypothetical protein [Legionella longbeachae D-4968]
Length = 391
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 142/289 (49%), Gaps = 37/289 (12%)
Query: 25 ISLIHGDHLTNVIITGYN---GTIDGQGQMWWDLWWNRTLKHTRGHLVELMNSNNILISN 81
I+LIH +H T ++G N IDG G+ WW R L+ L + N+ I +
Sbjct: 114 INLIHVNHFT---LSGDNPDTSVIDGNGEGWWKY----KTSQNRPFLLHLNHVENLTIDH 166
Query: 82 LTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLV 141
L +NSP + I +NV + + I AP ++PNTDGI+ S T + I + I++GDD +
Sbjct: 167 LQLKNSPRFHIMLRGGKNVAVHDLRIDAPQDSPNTDGINVGSITKMQINNIIIKNGDDGI 226
Query: 142 AVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAA 201
A+ A+ PS NI + V GV IGS + + ++ V+ L +A+
Sbjct: 227 AIN--------AINEPSKNIKISNVD--LFYGHGVSIGSGVKNTVSDIMVNNLSFHNASN 276
Query: 202 GVRIKT--DKG-----RGGYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDPKALPKI 254
G+RIKT DK + G + +IT +I ME VK PI ++ + G K+ I
Sbjct: 277 GLRIKTRCDKKDCSDTKKGAVTDITYSDITMENVKYPILYDM---EYSETG--SKSYVTI 331
Query: 255 RGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQCQ 303
+ I++ N+ S+N++K + + I KNV++ + QCQ
Sbjct: 332 KDITYQNIYSINSSKEARIFCGKYNKCSTIIFKNVNI-----DSGMQCQ 375
>gi|256424483|ref|YP_003125136.1| G-D-S-L family lipolytic protein [Chitinophaga pinensis DSM 2588]
gi|256039391|gb|ACU62935.1| lipolytic protein G-D-S-L family [Chitinophaga pinensis DSM 2588]
Length = 727
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 115/250 (46%), Gaps = 16/250 (6%)
Query: 57 WNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNT 116
+N R +++ + + +L+ +TF+NSP W +HP+ ++ ++ + P A N
Sbjct: 439 YNDIKDFLRPNMLSITSCKYVLLEGVTFQNSPAWCLHPLLTEHITLRDVYAKNPWYAQNG 498
Query: 117 DGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGV 176
DGID +S IE C + GDD + +KSG D G + ++IV + G
Sbjct: 499 DGIDLESCRYARIEGCTFDVGDDGICIKSGRDEQGRKRGVATEDVIVNNCT-VYHAHGGF 557
Query: 177 GIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERV-------- 228
+GSEMSGG N+ V G+R KT +GRGG +E I + NI M+ +
Sbjct: 558 VVGSEMSGGARNLFVSNCSFLGTDIGLRFKTTRGRGGIVEKIYVNNINMKDIPAEAILLD 617
Query: 229 -----KIPIRISRGSNDHPDEGWDP--KALPKIRGISFVNVVSVNTTKAPVLAGIIGTQF 281
K P+ +S + P A P+ + NVV KA + G+
Sbjct: 618 MYYMAKDPVPLSGEKREAVKVELFPVTDATPQFKDFHISNVVCHGAEKAIFIRGLPEMPI 677
Query: 282 EEICMKNVSL 291
+I +K++++
Sbjct: 678 SDIHLKDITI 687
>gi|476012|gb|AAA57139.1| endopolygalacturonase [Pectobacterium carotovorum]
Length = 402
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 94/276 (34%), Positives = 131/276 (47%), Gaps = 33/276 (11%)
Query: 43 GTIDGQGQM--------WWDLWWN---RTLKHTRGHLVELMNSNNILISNLTFRNSPFWT 91
GTIDGQG + WWDL + + LK L+++ S N + N++ NSP +
Sbjct: 143 GTIDGQGGVKLQDKKVSWWDLAADAKVKKLKQNTPRLIQINKSKNFTLYNVSLINSPNF- 201
Query: 92 IHPVYCRNVVIKG--MTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDH 149
H V+ TI P A NTDGIDP SS N+ I I +GDD VA+K+ +
Sbjct: 202 -HVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAHSNISTGDDNVAIKA---Y 257
Query: 150 YGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDK 209
G + R S I+ G T G+ IGSE + G++NVTVD L + G+RIK+DK
Sbjct: 258 KGRSETRNIS--ILHNEFG---TGHGMSIGSE-TMGVYNVTVDDLVMTGTTNGLRIKSDK 311
Query: 210 GRGGYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTK 269
G + + N+ M+ V PI I D E + +P I+F ++ S T
Sbjct: 312 SAAGVVNGVRYSNVVMKNVAKPIVI-----DTVYEKKEGSNVPDWSDITFKDITS-QTKG 365
Query: 270 APVLAGIIGTQFEEICMKNVSLLGLAPSAKWQCQFV 305
VL G + E+ MKNV L + WQ V
Sbjct: 366 VVVLNGENAKKPIEVTMKNVK---LTSDSTWQINNV 398
>gi|157830315|pdb|1BHE|A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora
Length = 376
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 95/276 (34%), Positives = 132/276 (47%), Gaps = 33/276 (11%)
Query: 43 GTIDGQGQM--------WWDLWWN---RTLKHTRGHLVELMNSNNILISNLTFRNSPFWT 91
GTIDGQG + WW+L + + LK L+++ S N + N++ NSP +
Sbjct: 117 GTIDGQGGVKLQDKKVSWWELAADAKVKKLKQNTPRLIQINKSKNFTLYNVSLINSPNF- 175
Query: 92 IHPVYCRNVVIKG--MTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDH 149
H V+ TI P A NTDGIDP SS N+ I I +GDD VA+K+ +
Sbjct: 176 -HVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAYSNIATGDDNVAIKA---Y 231
Query: 150 YGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDK 209
G A R S I+ G T G+ IGSE + G++NVTVD L + G+RIK+DK
Sbjct: 232 KGRAETRNIS--ILHNDFG---TGHGMSIGSE-TMGVYNVTVDDLKMNGTTNGLRIKSDK 285
Query: 210 GRGGYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTK 269
G + + N+ M+ V PI I D E + +P I+F +V S T
Sbjct: 286 SAAGVVNGVRYSNVVMKNVAKPIVI-----DTVYEKKEGSNVPDWSDITFKDVTS-ETKG 339
Query: 270 APVLAGIIGTQFEEICMKNVSLLGLAPSAKWQCQFV 305
VL G + E+ MKNV L + WQ + V
Sbjct: 340 VVVLNGENAKKPIEVTMKNVK---LTSDSTWQIKNV 372
>gi|50120034|ref|YP_049201.1| endo-polygalacturonase [Pectobacterium atrosepticum SCRI1043]
gi|49610560|emb|CAG74005.1| endo-polygalacturonase [Pectobacterium atrosepticum SCRI1043]
Length = 402
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 95/276 (34%), Positives = 132/276 (47%), Gaps = 33/276 (11%)
Query: 43 GTIDGQGQM--------WWDLWWN---RTLKHTRGHLVELMNSNNILISNLTFRNSPFWT 91
GTIDGQG + WW+L + + LK L+++ S N + N++ NSP +
Sbjct: 143 GTIDGQGGVKLQDKKVSWWELAADAKVKKLKQNTPRLIQINKSKNFTLYNVSLINSPNF- 201
Query: 92 IHPVYCRNVVIKG--MTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDH 149
H V+ TI P A NTDGIDP SS N+ I I +GDD VA+K+ +
Sbjct: 202 -HVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAYSNISTGDDNVAIKA---Y 257
Query: 150 YGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDK 209
G A R S I+ G T G+ IGSE + G++NVTVD L + G+RIK+DK
Sbjct: 258 KGRAETRNIS--ILHNDFG---TGHGMSIGSE-TMGVYNVTVDDLKMNGTTNGLRIKSDK 311
Query: 210 GRGGYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTK 269
G + + N+ M+ V PI I D E + +P I+F +V S T
Sbjct: 312 SAAGVVNGVRYSNVVMKNVAKPIVI-----DTVYEKKEGSNVPDWSDITFKDVTS-ETKG 365
Query: 270 APVLAGIIGTQFEEICMKNVSLLGLAPSAKWQCQFV 305
VL G + E+ MKNV L + WQ + V
Sbjct: 366 VVVLNGENAKKPIEVTMKNVK---LTSDSTWQIKNV 398
>gi|423312659|ref|ZP_17290596.1| hypothetical protein HMPREF1058_01208 [Bacteroides vulgatus
CL09T03C04]
gi|392687393|gb|EIY80686.1| hypothetical protein HMPREF1058_01208 [Bacteroides vulgatus
CL09T03C04]
Length = 849
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 87/153 (56%), Gaps = 2/153 (1%)
Query: 72 MNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIED 131
+N N+ + +TF +W I P YC ++VI+G+T+ + TDGID DSS +V IE
Sbjct: 199 INCKNVFVEGVTFERGLYWNIVPQYCEHIVIRGITVNS-FGHGRTDGIDIDSSNDVLIEY 257
Query: 132 CYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTV 191
C ++ DD +KSG G+ + RP+SN+++R+ S G+ G+E++GG+ NV +
Sbjct: 258 CSLDCQDDCYTMKSGRGEDGLKVNRPTSNVVIRK-SIALRGAGGIVCGTEIAGGVRNVYM 316
Query: 192 DQLHVWDAAAGVRIKTDKGRGGYIENITIRNIK 224
R KT + RGG++ENI + ++
Sbjct: 317 HDCVFEGTDQAFRFKTRRPRGGFVENIYVERVR 349
>gi|189459631|ref|ZP_03008416.1| hypothetical protein BACCOP_00257 [Bacteroides coprocola DSM 17136]
gi|189433713|gb|EDV02698.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 535
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 121/252 (48%), Gaps = 15/252 (5%)
Query: 54 DLWWNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNA 113
D WN R L+ + +L+ +TF+NSP W +HP+ C ++ I +++ P +
Sbjct: 227 DEEWNSIRDWLRPVLLSFIKCKKVLLEGVTFKNSPSWCLHPLSCEDITINNISVSNPWYS 286
Query: 114 PNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTC 173
N D +D +S I++ ++GDD + +KSG D G P N+I+R +
Sbjct: 287 QNGDALDLESCNRALIQNSSFDAGDDGICIKSGKDEDGRRRGEPCQNVIIRN-NVVLHGH 345
Query: 174 SGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIR 233
G +GSEMSGG+ N+ VD G+R K+ +GRGG +ENI I NI M +
Sbjct: 346 GGFVVGSEMSGGVKNIYVDNCTFLGTDVGLRFKSTRGRGGVVENIHINNINMINIPNEGL 405
Query: 234 I--------SRGSND---HPDEGWDP---KALPKIRGISFVNVVSVNTTKAPVLAGIIGT 279
I + G D +P E P + P R I NV + N +A + G+
Sbjct: 406 IFDLFYGGKAPGEGDGYNNPTEQKIPAVTEETPAFRDIFIKNVTAKNVGRAILFNGLPEM 465
Query: 280 QFEEICMKNVSL 291
+ I ++NV++
Sbjct: 466 PIKNIHIENVTM 477
>gi|254392542|ref|ZP_05007720.1| glycoside hydrolase [Streptomyces clavuligerus ATCC 27064]
gi|197706207|gb|EDY52019.1| glycoside hydrolase [Streptomyces clavuligerus ATCC 27064]
Length = 380
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 116/239 (48%), Gaps = 40/239 (16%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMW-WDLWW---------NRTLK-------------- 62
++ + V +TG G +DGQ + W+ W+ R L+
Sbjct: 59 FVYAHNQRGVAVTG-EGILDGQARRGPWESWYRTGTLQGPDQRLLRKMGSEGVPVKDRLF 117
Query: 63 ----HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDG 118
+ R +V+ ++LIS+LT + P WT+HPV C NV ++ +T+ + L+ NTDG
Sbjct: 118 GAGHYLRPKMVQFNRCRDVLISDLTIVDPPMWTVHPVLCTNVTVRNITVESLLH--NTDG 175
Query: 119 IDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGI 178
+DP++S V I C + DD VAVK+G D G + PS +I+V+ + G+ +
Sbjct: 176 VDPEASRLVHITGCRFNTNDDCVAVKAGRDEDGHRVGVPSEDIVVQDCD-FSGRWGGITV 234
Query: 179 GSEMSGGIFNVTVDQLHV--------WDAAAGVRIKTDKGRGGYIENITIRNIKMERVK 229
GSEMSGG+ V + + + V +K K RGG+++ + +R + V+
Sbjct: 235 GSEMSGGVRRVFAEDCRINPPDFPGHYPVKYPVYLKASKKRGGFVDGVYVRRFSGQAVE 293
>gi|383120496|ref|ZP_09941224.1| hypothetical protein BSIG_2496 [Bacteroides sp. 1_1_6]
gi|382985014|gb|EES68535.2| hypothetical protein BSIG_2496 [Bacteroides sp. 1_1_6]
Length = 462
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 89/165 (53%), Gaps = 10/165 (6%)
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
H R HL+ N+++ R SPFWTIH C +++ + + A + N DGID +
Sbjct: 204 HLRPHLIHFNRCKNVMLDGFKIRESPFWTIHLYMCDGGIVRNLDVRA--HGHNNDGIDFE 261
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRR---VSGTTPTCSGVGIG 179
S N +EDC + GDD V +K+G + + P NI++R + G T +GIG
Sbjct: 262 MSRNFLVEDCSFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRNCRILKGHTL----LGIG 317
Query: 180 SEMSGGIFNVTV-DQLHVWDAAAGVRIKTDKGRGGYIENITIRNI 223
SE+SGGI N+ + D + +KT+ RGG+IENI ++N+
Sbjct: 318 SEISGGIRNIYMHDCTAPYSVMRLFFVKTNHRRGGFIENIYMKNV 362
>gi|261822561|ref|YP_003260667.1| glycoside hydrolase family protein [Pectobacterium wasabiae WPP163]
gi|129936|sp|P26509.1|PGLR2_PECCC RecName: Full=Endo-polygalacturonase; Flags: Precursor
gi|42334|emb|CAA35998.1| endopolygalacturonase [Pectobacterium carotovorum]
gi|261606574|gb|ACX89060.1| glycoside hydrolase family 28 [Pectobacterium wasabiae WPP163]
gi|385872872|gb|AFI91392.1| Polygalacturonase [Pectobacterium sp. SCC3193]
Length = 402
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 95/276 (34%), Positives = 132/276 (47%), Gaps = 33/276 (11%)
Query: 43 GTIDGQGQM--------WWDLWWN---RTLKHTRGHLVELMNSNNILISNLTFRNSPFWT 91
GTIDGQG + WW+L + + LK L+++ S N + N++ NSP +
Sbjct: 143 GTIDGQGGVKLQDKKVSWWELAADAKVKKLKQNTPRLIQINKSKNFTLYNVSLINSPNF- 201
Query: 92 IHPVYCRNVVIKG--MTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDH 149
H V+ TI P A NTDGIDP SS N+ I I +GDD VA+K+ +
Sbjct: 202 -HVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAYSNIATGDDNVAIKA---Y 257
Query: 150 YGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDK 209
G A R S I+ G T G+ IGSE + G++NVTVD L + G+RIK+DK
Sbjct: 258 KGRAETRNIS--ILHNDFG---TGHGMSIGSE-TMGVYNVTVDDLKMNGTTNGLRIKSDK 311
Query: 210 GRGGYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTK 269
G + + N+ M+ V PI I D E + +P I+F +V S T
Sbjct: 312 SAAGVVNGVRYSNVVMKNVAKPIVI-----DTVYEKKEGSNVPDWSDITFKDVTS-ETKG 365
Query: 270 APVLAGIIGTQFEEICMKNVSLLGLAPSAKWQCQFV 305
VL G + E+ MKNV L + WQ + V
Sbjct: 366 VVVLNGENAKKPIEVTMKNVK---LTSDSTWQIKNV 398
>gi|294815999|ref|ZP_06774642.1| Pectate lyase [Streptomyces clavuligerus ATCC 27064]
gi|326444342|ref|ZP_08219076.1| glycoside hydrolase family 28 [Streptomyces clavuligerus ATCC
27064]
gi|294328598|gb|EFG10241.1| Pectate lyase [Streptomyces clavuligerus ATCC 27064]
Length = 479
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 116/239 (48%), Gaps = 40/239 (16%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMW-WDLWW---------NRTLK-------------- 62
++ + V +TG G +DGQ + W+ W+ R L+
Sbjct: 158 FVYAHNQRGVAVTG-EGILDGQARRGPWESWYRTGTLQGPDQRLLRKMGSEGVPVKDRLF 216
Query: 63 ----HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDG 118
+ R +V+ ++LIS+LT + P WT+HPV C NV ++ +T+ + L+ NTDG
Sbjct: 217 GAGHYLRPKMVQFNRCRDVLISDLTIVDPPMWTVHPVLCTNVTVRNITVESLLH--NTDG 274
Query: 119 IDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGI 178
+DP++S V I C + DD VAVK+G D G + PS +I+V+ + G+ +
Sbjct: 275 VDPEASRLVHITGCRFNTNDDCVAVKAGRDEDGHRVGVPSEDIVVQDCD-FSGRWGGITV 333
Query: 179 GSEMSGGIFNVTVDQLHV--------WDAAAGVRIKTDKGRGGYIENITIRNIKMERVK 229
GSEMSGG+ V + + + V +K K RGG+++ + +R + V+
Sbjct: 334 GSEMSGGVRRVFAEDCRINPPDFPGHYPVKYPVYLKASKKRGGFVDGVYVRRFSGQAVE 392
>gi|421082988|ref|ZP_15543867.1| Peh-1 [Pectobacterium wasabiae CFBP 3304]
gi|401702214|gb|EJS92458.1| Peh-1 [Pectobacterium wasabiae CFBP 3304]
Length = 402
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 95/277 (34%), Positives = 133/277 (48%), Gaps = 33/277 (11%)
Query: 43 GTIDGQGQM--------WWDLWWN---RTLKHTRGHLVELMNSNNILISNLTFRNSPFWT 91
GTIDGQG + WW+L + + LK L+++ S N + N++ NSP +
Sbjct: 143 GTIDGQGGVKLQDKKVSWWELAADAKVKKLKQNTPRLIQINKSKNFTLYNVSLINSPNF- 201
Query: 92 IHPVYCRNVVIKG--MTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDH 149
H V+ TI P A NTDGIDP SS N+ I I +GDD VA+K+ +
Sbjct: 202 -HVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAYSNIATGDDNVAIKA---Y 257
Query: 150 YGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDK 209
G A R S I+ G T G+ IGSE + G++NVTVD L + G+RIK+DK
Sbjct: 258 KGRAETRNIS--ILHNDFG---TGHGMSIGSE-TMGVYNVTVDDLKMNGTTNGLRIKSDK 311
Query: 210 GRGGYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTK 269
G + + N+ M+ V PI I D E + +P I+F +V S T
Sbjct: 312 SAAGVVNGVRYSNVVMKNVAKPIVI-----DTVYEKKEGSNVPDWSDITFKDVTS-ETKG 365
Query: 270 APVLAGIIGTQFEEICMKNVSLLGLAPSAKWQCQFVS 306
VL G + E+ MKNV L + WQ + V+
Sbjct: 366 IVVLNGENAKKPIEVTMKNVK---LTSDSTWQIKNVT 399
>gi|260642009|ref|ZP_05414289.2| exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii DSM
17565]
gi|260623835|gb|EEX46706.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 546
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 85/163 (52%), Gaps = 1/163 (0%)
Query: 54 DLWWNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNA 113
D WN R L+ ++ S IL+ +TF+NSP W +HP+ C + + + ++ P +
Sbjct: 227 DEEWNEIRPWLRPVLLSIVKSKKILLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYS 286
Query: 114 PNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTC 173
N D ID +S N I + ++GDD + +KS D G P N+IV+ +
Sbjct: 287 QNGDAIDLESCKNALIINSVFDAGDDAICIKSDKDEDGRRRGEPCQNVIVKN-NTVLHGH 345
Query: 174 SGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIE 216
G +GSEMSGG+ N+ V+ G+R K+ +GRGG +E
Sbjct: 346 GGFVVGSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 388
>gi|407684685|ref|YP_006799859.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii str.
'English Channel 673']
gi|407246296|gb|AFT75482.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii str.
'English Channel 673']
Length = 476
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 143/300 (47%), Gaps = 36/300 (12%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNR--TLKHT-----------------RGH 67
LI+ ++ +V ITG GTIDG Q + W+ + T H GH
Sbjct: 156 LIYALNVEDVAITG-KGTIDGNAQSAFIGWYEKQNTDMHALRKMGFDGVPVEKRQFGEGH 214
Query: 68 -----LVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
L++ ++ +L+ + T NSPFW H VY + ++ + + + L N DG+D +
Sbjct: 215 YLRPPLIQFFHAKRVLLEDYTALNSPFWVNHLVYTSHATVRRVKVESHLY--NNDGLDIE 272
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
SS V ED + +GDD + +KSG D G + PS++I+ R + G+G+GSEM
Sbjct: 273 SSQFVLAEDNHFRTGDDGIVIKSGRDADGRNIGIPSTDIVAR--NNDLGGEDGIGLGSEM 330
Query: 183 SGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVK--IPIRISRGSND 240
SGGI V + + + + R K++ RGG +E + IR ++ K +++ SN
Sbjct: 331 SGGIKRVFFENNILHEGDSAYRFKSNLDRGGRVEMVRIRGSEVASFKHLFWFQLNYPSNL 390
Query: 241 HPDEGWDPKALPK--IRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSA 298
H G P I ++ NV +V AP A + +F++I +K + + +A
Sbjct: 391 H---GNFPATYTDIIIEDLTVENVGTVLEIHAPDAAPVHNVKFKDIKIKEAEEILILENA 447
>gi|336404054|ref|ZP_08584754.1| hypothetical protein HMPREF0127_02067 [Bacteroides sp. 1_1_30]
gi|335943751|gb|EGN05584.1| hypothetical protein HMPREF0127_02067 [Bacteroides sp. 1_1_30]
Length = 460
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 89/166 (53%), Gaps = 10/166 (6%)
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
H R HL+ N+L+ R SPFWTIH C +++ + + A + N DGID +
Sbjct: 204 HLRPHLIHFNRCKNVLLDGFKIRESPFWTIHLYMCDGGLVRNLDVKA--HGDNNDGIDFE 261
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S N +EDC + GDD V +K+G + + P NI++R + +GIGSE+
Sbjct: 262 MSRNFLVEDCSFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRNCQ-ILKGHTLLGIGSEI 320
Query: 183 SGGIFNVTVDQLHVWDAAAGVR----IKTDKGRGGYIENITIRNIK 224
SGGI N+ +H A V +KT+ RGG+IEN+ ++N++
Sbjct: 321 SGGIRNI---YMHDCTAPNSVMRLFFVKTNHRRGGFIENVYMKNVQ 363
>gi|227538562|ref|ZP_03968611.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
33300]
gi|227241481|gb|EEI91496.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
33300]
Length = 647
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 135/276 (48%), Gaps = 24/276 (8%)
Query: 26 SLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKHTRGHLVELMNSNNILISNLTFR 85
+LI+ ++ I+G GTIDGQG+ + N TR ++E N ++I + ++
Sbjct: 139 ALIYAKDANHIGISG-TGTIDGQGKSS-EFQNNGKEDGTRPKIIEFANCDDITVKDINLT 196
Query: 86 NSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKS 145
N+ +WT + VYCRNVVI + + + N N DGID DS NV I +C I S DD + +KS
Sbjct: 197 NAAYWTQYYVYCRNVVIDHINVYSFANF-NNDGIDVDSQ-NVTIRNCTINSQDDGICLKS 254
Query: 146 GWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQ-------LHVWD 198
N+ V + TT C+G+ G+ S G N+ V LH++
Sbjct: 255 -------ESPVACRNVTVDNCTITT-NCNGIKFGTASSAGFKNIKVQNCKVSKPPLHLYP 306
Query: 199 AAAGVR-IKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDPKALP-KIRG 256
G I + GG I+++ NI++ V+ PI I G D + D LP K++
Sbjct: 307 RVYGQSGIAIEAVDGGVIDSVLCDNIQISGVETPIFIKLG--DRSRKNPDGLGLPGKMQN 364
Query: 257 ISFVNVVSVNTTK-APVLAGIIGTQFEEICMKNVSL 291
++ NV + +K + + G G I +KNVSL
Sbjct: 365 VTISNVTARGESKMSSSITGFPGYYVNNIVLKNVSL 400
>gi|295086705|emb|CBK68228.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
Length = 460
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 89/166 (53%), Gaps = 10/166 (6%)
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
H R HL+ N+L+ R SPFWTIH C +++ + + A + N DGID +
Sbjct: 204 HLRPHLIHFNRCKNVLLDGFKIRESPFWTIHLYMCDGGLVRNLDVKA--HGDNNDGIDFE 261
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S N +EDC + GDD V +K+G + + P NI++R + +GIGSE+
Sbjct: 262 MSRNFLVEDCSFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRNCQ-ILKGHTLLGIGSEI 320
Query: 183 SGGIFNVTVDQLHVWDAAAGVR----IKTDKGRGGYIENITIRNIK 224
SGGI N+ +H A V +KT+ RGG+IEN+ ++N++
Sbjct: 321 SGGIRNI---YMHDCTAPNSVMRLFFVKTNHRRGGFIENVYMKNVQ 363
>gi|298482100|ref|ZP_07000288.1| glycoside Hydrolase Family 28 [Bacteroides sp. D22]
gi|298271657|gb|EFI13230.1| glycoside Hydrolase Family 28 [Bacteroides sp. D22]
Length = 460
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 116/251 (46%), Gaps = 41/251 (16%)
Query: 7 IDPLPSYGRGRERLGGRHIS-LIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNR------ 59
D LP+ E L + S L++ NV ITG GT+ + W +W+ R
Sbjct: 121 FDYLPAVMTSWEGLECYNYSPLLYAFECENVAITG-KGTLQPKMDTW-KVWFKRPQPHLE 178
Query: 60 TLK----------------------HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYC 97
LK H R HL+ N+L+ R SPFWTIH C
Sbjct: 179 ALKELYTKASTDVPVIERQMAVGENHLRPHLIHFNRCKNVLLDGFKIRESPFWTIHLYMC 238
Query: 98 RNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARP 157
+++ + + A + N DGID + S N +EDC + GDD V +K+G + + P
Sbjct: 239 DGGLVRNLDVKA--HGHNNDGIDFEMSRNFLVEDCSFDQGDDAVVIKAGRNQDAWRLNTP 296
Query: 158 SSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVR----IKTDKGRGG 213
NI++R + +GIGSE+SGGI N+ +H A V +KT+ RGG
Sbjct: 297 CENIVIRNCQ-ILKGHTLLGIGSEISGGIRNI---YMHDCTAPNSVMRLFFVKTNHRRGG 352
Query: 214 YIENITIRNIK 224
+IEN+ ++N++
Sbjct: 353 FIENVYMKNVQ 363
>gi|262408407|ref|ZP_06084954.1| pectate lyase [Bacteroides sp. 2_1_22]
gi|294646414|ref|ZP_06724057.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294807852|ref|ZP_06766636.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345508621|ref|ZP_08788247.1| pectate lyase [Bacteroides sp. D1]
gi|229445709|gb|EEO51500.1| pectate lyase [Bacteroides sp. D1]
gi|262353959|gb|EEZ03052.1| pectate lyase [Bacteroides sp. 2_1_22]
gi|292638241|gb|EFF56616.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294444947|gb|EFG13630.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
Length = 460
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 89/166 (53%), Gaps = 10/166 (6%)
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
H R HL+ N+L+ R SPFWTIH C +++ + + A + N DGID +
Sbjct: 204 HLRPHLIHFNRCKNVLLDGFKIRESPFWTIHLYMCDGGLVRNLDVKA--HGHNNDGIDFE 261
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEM 182
S N +EDC + GDD V +K+G + + P NI++R + +GIGSE+
Sbjct: 262 MSRNFLVEDCSFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRNCQ-ILKGHTLLGIGSEI 320
Query: 183 SGGIFNVTVDQLHVWDAAAGVR----IKTDKGRGGYIENITIRNIK 224
SGGI N+ +H A V +KT+ RGG+IEN+ ++N++
Sbjct: 321 SGGIRNI---YMHDCTAPNSVMRLFFVKTNHRRGGFIENVYMKNVQ 363
>gi|298482165|ref|ZP_07000353.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298271722|gb|EFI13295.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 539
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 85/163 (52%), Gaps = 1/163 (0%)
Query: 54 DLWWNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNA 113
D W R L+ ++ S +L+ +TF+NSP W +HP+ C + + + ++ P +
Sbjct: 228 DEEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYS 287
Query: 114 PNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTC 173
N D ID +S N I + ++GDD + +KSG D G P N+IV+ +
Sbjct: 288 QNGDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKN-NTVLHGH 346
Query: 174 SGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIE 216
G +GSEMSGG+ N+ V+ G+R K+ +GRGG +E
Sbjct: 347 GGFVVGSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 389
>gi|374311248|ref|YP_005057678.1| glycoside hydrolase family protein [Granulicella mallensis
MP5ACTX8]
gi|358753258|gb|AEU36648.1| glycoside hydrolase family 28 [Granulicella mallensis MP5ACTX8]
Length = 461
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 99/183 (54%), Gaps = 4/183 (2%)
Query: 55 LWWNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNA- 113
L W R LV++ NS++I +S L + S FWT+H Y ++ + G+TI +
Sbjct: 163 LRWAADYDAKRPRLVQIFNSDHIKLSGLMLKRSGFWTVHICYSHDIEVDGVTIRNNEDGK 222
Query: 114 -PNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPT 172
P+TDGID DSS + ++ I DD + +K+G D G+ + RP+ +++++ S
Sbjct: 223 GPSTDGIDIDSSKKILVQHADISVNDDALCLKAGRDSDGLRVNRPTEDVVLKD-SVVRAG 281
Query: 173 CSGVGIGSEMSGGIFNVTVDQLHVWD-AAAGVRIKTDKGRGGYIENITIRNIKMERVKIP 231
+GV GSE SGG NV + V G+ K+ RGG+ E+I I ++ ++ V +
Sbjct: 282 AAGVTFGSETSGGFRNVEAYGITVLKPVPVGILFKSAHTRGGWAEDIRIHDMDLKDVAVA 341
Query: 232 IRI 234
IR+
Sbjct: 342 IRV 344
>gi|262408522|ref|ZP_06085068.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294646518|ref|ZP_06724155.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|262353387|gb|EEZ02481.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292638137|gb|EFF56518.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
Length = 539
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 85/163 (52%), Gaps = 1/163 (0%)
Query: 54 DLWWNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNA 113
D W R L+ ++ S +L+ +TF+NSP W +HP+ C + + + ++ P +
Sbjct: 228 DEEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYS 287
Query: 114 PNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTC 173
N D ID +S N I + ++GDD + +KSG D G P N+IV+ +
Sbjct: 288 QNGDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKN-NTVLHGH 346
Query: 174 SGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIE 216
G +GSEMSGG+ N+ V+ G+R K+ +GRGG +E
Sbjct: 347 GGFVVGSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 389
>gi|383114440|ref|ZP_09935204.1| hypothetical protein BSGG_5145 [Bacteroides sp. D2]
gi|382948584|gb|EIC71811.1| hypothetical protein BSGG_5145 [Bacteroides sp. D2]
Length = 529
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 85/163 (52%), Gaps = 1/163 (0%)
Query: 54 DLWWNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNA 113
D W R L+ ++ S +L+ +TF+NSP W +HP+ C + + + ++ P +
Sbjct: 218 DEEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYS 277
Query: 114 PNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTC 173
N D ID +S N I + ++GDD + +KSG D G P N+IV+ +
Sbjct: 278 QNGDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKN-NTVLHGH 336
Query: 174 SGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIE 216
G +GSEMSGG+ N+ V+ G+R K+ +GRGG +E
Sbjct: 337 GGFVVGSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 379
>gi|387904260|ref|YP_006334598.1| Polygalacturonase [Burkholderia sp. KJ006]
gi|387579152|gb|AFJ87867.1| Polygalacturonase [Burkholderia sp. KJ006]
Length = 664
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 94/173 (54%), Gaps = 18/173 (10%)
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
+ R +VE + N+L+ N +N+PFW HP RNVVI+G+T + PN DG DPD
Sbjct: 332 YLRPCMVEFIGCTNVLMENYQTQNTPFWQHHPTASRNVVIRGVTTNS--IGPNNDGFDPD 389
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWD---HYGIAMARPSSNIIVRRVSGTTPTCSGVGIG 179
+ T+V E C +GDD VA+KSG D YG P+ ++R + + G+ +G
Sbjct: 390 ACTDVLCERCTFNTGDDCVAIKSGKDRDTEYG-----PAKRHLIRDCTMNSGH-GGITLG 443
Query: 180 SEMSGGIFNVTVDQLHVWDA-------AAGVRIKTDKGRGGYIENITIRNIKM 225
SEM GG+ + L + +A +R+KT+ RGGY+++ ++ + +
Sbjct: 444 SEMGGGVEQIYATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVVL 496
>gi|294807547|ref|ZP_06766344.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345512393|ref|ZP_08791923.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D1]
gi|294445248|gb|EFG13918.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345453872|gb|EEO50012.2| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D1]
Length = 529
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 85/163 (52%), Gaps = 1/163 (0%)
Query: 54 DLWWNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNA 113
D W R L+ ++ S +L+ +TF+NSP W +HP+ C + + + ++ P +
Sbjct: 218 DEEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYS 277
Query: 114 PNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTC 173
N D ID +S N I + ++GDD + +KSG D G P N+IV+ +
Sbjct: 278 QNGDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKN-NTVLHGH 336
Query: 174 SGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIE 216
G +GSEMSGG+ N+ V+ G+R K+ +GRGG +E
Sbjct: 337 GGFVVGSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 379
>gi|293369380|ref|ZP_06615965.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|336406828|ref|ZP_08587475.1| hypothetical protein HMPREF0127_04788 [Bacteroides sp. 1_1_30]
gi|292635547|gb|EFF54054.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|335933190|gb|EGM95200.1| hypothetical protein HMPREF0127_04788 [Bacteroides sp. 1_1_30]
Length = 529
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 85/163 (52%), Gaps = 1/163 (0%)
Query: 54 DLWWNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNA 113
D W R L+ ++ S +L+ +TF+NSP W +HP+ C + + + ++ P +
Sbjct: 218 DEEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYS 277
Query: 114 PNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTC 173
N D ID +S N I + ++GDD + +KSG D G P N+IV+ +
Sbjct: 278 QNGDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKN-NTVLHGH 336
Query: 174 SGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIE 216
G +GSEMSGG+ N+ V+ G+R K+ +GRGG +E
Sbjct: 337 GGFVVGSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 379
>gi|160887026|ref|ZP_02068029.1| hypothetical protein BACOVA_05040 [Bacteroides ovatus ATCC 8483]
gi|423288884|ref|ZP_17267735.1| hypothetical protein HMPREF1069_02778 [Bacteroides ovatus
CL02T12C04]
gi|156107437|gb|EDO09182.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|295086775|emb|CBK68298.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
gi|392668974|gb|EIY62466.1| hypothetical protein HMPREF1069_02778 [Bacteroides ovatus
CL02T12C04]
Length = 539
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 85/163 (52%), Gaps = 1/163 (0%)
Query: 54 DLWWNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNA 113
D W R L+ ++ S +L+ +TF+NSP W +HP+ C + + + ++ P +
Sbjct: 228 DEEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYS 287
Query: 114 PNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTC 173
N D ID +S N I + ++GDD + +KSG D G P N+IV+ +
Sbjct: 288 QNGDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKN-NTVLHGH 346
Query: 174 SGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIE 216
G +GSEMSGG+ N+ V+ G+R K+ +GRGG +E
Sbjct: 347 GGFVVGSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 389
>gi|423294962|ref|ZP_17273089.1| hypothetical protein HMPREF1070_01754 [Bacteroides ovatus
CL03T12C18]
gi|392674542|gb|EIY67988.1| hypothetical protein HMPREF1070_01754 [Bacteroides ovatus
CL03T12C18]
Length = 529
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 85/163 (52%), Gaps = 1/163 (0%)
Query: 54 DLWWNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNA 113
D W R L+ ++ S +L+ +TF+NSP W +HP+ C + + + ++ P +
Sbjct: 218 DEEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYS 277
Query: 114 PNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTC 173
N D ID +S N I + ++GDD + +KSG D G P N+IV+ +
Sbjct: 278 QNGDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKN-NTVLHGH 336
Query: 174 SGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIE 216
G +GSEMSGG+ N+ V+ G+R K+ +GRGG +E
Sbjct: 337 GGFVVGSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 379
>gi|298383811|ref|ZP_06993372.1| glycoside Hydrolase Family 28 [Bacteroides sp. 1_1_14]
gi|298263415|gb|EFI06278.1| glycoside Hydrolase Family 28 [Bacteroides sp. 1_1_14]
Length = 464
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 90/168 (53%), Gaps = 16/168 (9%)
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
H R HL+ N+++ R SPFWTIH C +++ + + A + N DGID +
Sbjct: 206 HLRPHLIHFNRCKNVMLDGFKIRESPFWTIHLYMCDGGIVRNLDVRA--HGHNNDGIDFE 263
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRR---VSGTTPTCSGVGIG 179
S N +EDC + GDD V +K+G + + P NI++R + G T +GIG
Sbjct: 264 MSRNFLVEDCSFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRNCRILKGHTL----LGIG 319
Query: 180 SEMSGGIFNVTVDQLHVWDAAAGVR----IKTDKGRGGYIENITIRNI 223
SE+SGGI N+ +H A V +KT+ RGG+IENI ++N+
Sbjct: 320 SEISGGIRNI---YMHDCTAPNSVMRLFFVKTNHRRGGFIENIYMKNV 364
>gi|297834448|ref|XP_002885106.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297330946|gb|EFH61365.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 454
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/293 (32%), Positives = 139/293 (47%), Gaps = 37/293 (12%)
Query: 43 GTIDGQGQMWWDLWWNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVI 102
G I+GQG WW+ K +R ++ + NN+ +S LT +SP IH C V I
Sbjct: 121 GEINGQGSSWWEH------KGSRPTALKFKSCNNLRLSGLTHVDSPMAHIHINDCNYVTI 174
Query: 103 KGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNII 162
+ I AP ++PNTDGID SS+NV I+DC I +GDD +A+ SG +SNI
Sbjct: 175 SSLRINAPESSPNTDGIDVGSSSNVVIQDCVIGTGDDCIAINSG-----------TSNI- 222
Query: 163 VRRVSGTTPTCS---GVGIGSEMSGG----IFNVTVDQLHVWDAAAGVRIKTDKGRGGYI 215
R+SG C G+ IGS G + NV V + G RIKT +G GY
Sbjct: 223 --RISGI--DCGPGHGISIGSLGKDGETATVENVCVQNCNFRGTTNGARIKTWQGGSGYA 278
Query: 216 ENITIRNIKMERVKIPIRISRGSN-DHPDEGWDPKALP-KIRGISFVNVVSVNTTKAPVL 273
IT I ++ V+ PI I + N D+ D K+ ++ + + N + + ++ V
Sbjct: 279 RMITFNGITLDNVENPIIIDQLYNGGDSDKAKDHKSSAVEVSKVVYSNFIGTSKSEYGVD 338
Query: 274 AGIIGT-QFEEICMKNVSLL----GLAPSAKWQCQFVSGFTSQVFP-LPCPQL 320
T EI +++V + G A+ QC V G ++ P L C L
Sbjct: 339 FRCSETVPCTEIFLRDVKIETASSGSGQVAQGQCLNVRGVSTLAVPGLECLAL 391
>gi|237721299|ref|ZP_04551780.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 2_2_4]
gi|229449095|gb|EEO54886.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 2_2_4]
Length = 539
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 85/163 (52%), Gaps = 1/163 (0%)
Query: 54 DLWWNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNA 113
D W R L+ ++ S +L+ +TF+NSP W +HP+ C + + + ++ P +
Sbjct: 228 DEEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYS 287
Query: 114 PNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTC 173
N D ID +S N I + ++GDD + +KSG D G P N+IV+ +
Sbjct: 288 QNGDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKN-NTVLHGH 346
Query: 174 SGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIE 216
G +GSEMSGG+ N+ V+ G+R K+ +GRGG +E
Sbjct: 347 GGFVVGSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 389
>gi|393786392|ref|ZP_10374528.1| hypothetical protein HMPREF1068_00808 [Bacteroides nordii
CL02T12C05]
gi|392660021|gb|EIY53638.1| hypothetical protein HMPREF1068_00808 [Bacteroides nordii
CL02T12C05]
Length = 477
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 135/302 (44%), Gaps = 51/302 (16%)
Query: 35 NVIITGYNGTIDGQGQMWWD-------------LWWNRTLKHTRGHLVELMNSNNILISN 81
N I+G +G I+G+G+++WD L W R + + N+ + N
Sbjct: 147 NAAISG-DGVINGRGKVFWDKYRSMRKEYDPKGLRWIVDYDCERPRGILIAECENVTVEN 205
Query: 82 LTFRNSPFWTIHPVYCRNVVIKGMTILAPLNA--PNTDGIDPDSSTNVCIEDCYIESGDD 139
+ FW++H +Y + V + G+ I + P+TDGID DSS + +++ I DD
Sbjct: 206 IVLYQPGFWSLHILYSKYVTVDGIIISNNIEGRGPSTDGIDIDSSEYILVQNSNINCNDD 265
Query: 140 LVAVKSGWDHYGIAMARPSSNIIVRR-VSGTTP---TCSGVGIGSEMSGGIFNVTVDQLH 195
+K+G D G+ + RP +++R ++G TC GSE SGGI N+ +
Sbjct: 266 NFCLKAGRDSDGLRVNRPCRYVVIRDCIAGHGDGLFTC-----GSETSGGINNIVAYNMT 320
Query: 196 VWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPD-------EGWDP 248
G+R K+ RGG IE+I + NI+M V+ P + N HP EG+D
Sbjct: 321 GMGTKYGLRFKSTCQRGGVIEDIYLCNIEMIGVRDPFVVDL--NWHPAYSTSKLPEGYDE 378
Query: 249 KAL-----------------PKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 291
K + PK R + F+NV + N ++GI + + NV
Sbjct: 379 KNVPTHWIKMLTPVDPKQGTPKFRNVHFMNVTATNAQTCIKVSGIENSTIDGFDFDNVHF 438
Query: 292 LG 293
G
Sbjct: 439 SG 440
>gi|423212244|ref|ZP_17198773.1| hypothetical protein HMPREF1074_00305 [Bacteroides xylanisolvens
CL03T12C04]
gi|392695132|gb|EIY88357.1| hypothetical protein HMPREF1074_00305 [Bacteroides xylanisolvens
CL03T12C04]
Length = 539
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 85/163 (52%), Gaps = 1/163 (0%)
Query: 54 DLWWNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNA 113
D W R L+ ++ S +L+ +TF+NSP W +HP+ C + + + ++ P +
Sbjct: 228 DEEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNVMVINPWYS 287
Query: 114 PNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTC 173
N D ID +S N I + ++GDD + +KSG D G P N+IV+ +
Sbjct: 288 QNGDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKN-NTVLHGH 346
Query: 174 SGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIE 216
G +GSEMSGG+ N+ V+ G+R K+ +GRGG +E
Sbjct: 347 GGFVVGSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 389
>gi|299148526|ref|ZP_07041588.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
gi|298513287|gb|EFI37174.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
Length = 539
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 85/163 (52%), Gaps = 1/163 (0%)
Query: 54 DLWWNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNA 113
D W R L+ ++ S +L+ +TF+NSP W +HP+ C + + + ++ P +
Sbjct: 228 DEEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYS 287
Query: 114 PNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTC 173
N D ID +S N I + ++GDD + +KSG D G P N+IV+ +
Sbjct: 288 QNGDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKN-NTVLHGH 346
Query: 174 SGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIE 216
G +GSEMSGG+ N+ V+ G+R K+ +GRGG +E
Sbjct: 347 GGFVVGSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 389
>gi|336414787|ref|ZP_08595131.1| hypothetical protein HMPREF1017_02239 [Bacteroides ovatus
3_8_47FAA]
gi|335942157|gb|EGN04005.1| hypothetical protein HMPREF1017_02239 [Bacteroides ovatus
3_8_47FAA]
Length = 529
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 85/163 (52%), Gaps = 1/163 (0%)
Query: 54 DLWWNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNA 113
D W R L+ ++ S +L+ +TF+NSP W +HP+ C + + + ++ P +
Sbjct: 218 DEEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYS 277
Query: 114 PNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTC 173
N D ID +S N I + ++GDD + +KSG D G P N+IV+ +
Sbjct: 278 QNGDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKN-NTVLHGH 336
Query: 174 SGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIE 216
G +GSEMSGG+ N+ V+ G+R K+ +GRGG +E
Sbjct: 337 GGFVVGSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 379
>gi|423216971|ref|ZP_17203467.1| hypothetical protein HMPREF1061_00240 [Bacteroides caccae
CL03T12C61]
gi|392629501|gb|EIY23508.1| hypothetical protein HMPREF1061_00240 [Bacteroides caccae
CL03T12C61]
Length = 539
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 85/163 (52%), Gaps = 1/163 (0%)
Query: 54 DLWWNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNA 113
D W R L+ ++ S +L+ +TF+NSP W +HP+ C + + + ++ P +
Sbjct: 228 DEEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYS 287
Query: 114 PNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTC 173
N D ID +S N I + ++GDD + +KSG D G P N+IV+ +
Sbjct: 288 QNGDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKN-NTVLHGH 346
Query: 174 SGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIE 216
G +GSEMSGG+ N+ V+ G+R K+ +GRGG +E
Sbjct: 347 GGFVVGSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 389
>gi|427384664|ref|ZP_18881169.1| hypothetical protein HMPREF9447_02202 [Bacteroides oleiciplenus YIT
12058]
gi|425727925|gb|EKU90784.1| hypothetical protein HMPREF9447_02202 [Bacteroides oleiciplenus YIT
12058]
Length = 545
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 85/159 (53%), Gaps = 2/159 (1%)
Query: 72 MNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIED 131
+N N+ I +T S W + P YC NV+I+G+T+ + L P DGID +SS NV IE
Sbjct: 228 INCTNVFIEGITMNRSAIWNVVPTYCENVIIRGITVNS-LGIPRGDGIDVESSKNVLIEY 286
Query: 132 CYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTV 191
C + GDD +KSG G+ + RP+ N+++ R S G+ GSE +G I N+
Sbjct: 287 CTLNCGDDCFTLKSGRGEEGVRIGRPTENVVI-RYSLAQQGHGGITCGSETAGNIKNIYA 345
Query: 192 DQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKI 230
+G+R K + RGG EN+ + I+M V +
Sbjct: 346 HDCVFNGTWSGIRFKAFRPRGGGTENVLYKRIRMIDVNV 384
>gi|153807509|ref|ZP_01960177.1| hypothetical protein BACCAC_01789 [Bacteroides caccae ATCC 43185]
gi|149129871|gb|EDM21083.1| polygalacturonase (pectinase) [Bacteroides caccae ATCC 43185]
Length = 539
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 85/163 (52%), Gaps = 1/163 (0%)
Query: 54 DLWWNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNA 113
D W R L+ ++ S +L+ +TF+NSP W +HP+ C + + + ++ P +
Sbjct: 228 DEEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYS 287
Query: 114 PNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTC 173
N D ID +S N I + ++GDD + +KSG D G P N+IV+ +
Sbjct: 288 QNGDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKN-NTVLHGH 346
Query: 174 SGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIE 216
G +GSEMSGG+ N+ V+ G+R K+ +GRGG +E
Sbjct: 347 GGFVVGSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 389
>gi|380693882|ref|ZP_09858741.1| hypothetical protein BfaeM_07848 [Bacteroides faecis MAJ27]
Length = 454
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 91/169 (53%), Gaps = 16/169 (9%)
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
H R HL+ N+++ R SPFWTIH C +++ + + A + N DGID +
Sbjct: 196 HLRPHLIHFNRCKNVMLDGFKIRESPFWTIHLYMCDGGMVRNLDVRA--HGHNNDGIDFE 253
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRR---VSGTTPTCSGVGIG 179
S N +EDC + GDD V +K+G + + P NI++R + G T +GIG
Sbjct: 254 MSRNFLVEDCSFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRNCRILKGHTL----LGIG 309
Query: 180 SEMSGGIFNVTVDQLHVWDAAAGVR----IKTDKGRGGYIENITIRNIK 224
SE+SGGI N+ +H A V +KT+ RGG+IENI ++N++
Sbjct: 310 SEISGGIRNI---YMHDCTAPNSVMRLFFVKTNHRRGGFIENIYMKNVE 355
>gi|259908124|ref|YP_002648480.1| Endo-polygalacturonase [Erwinia pyrifoliae Ep1/96]
gi|224963746|emb|CAX55246.1| Endo-polygalacturonase [Erwinia pyrifoliae Ep1/96]
Length = 416
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 131/274 (47%), Gaps = 29/274 (10%)
Query: 43 GTIDGQG--------QMWWDLWW---NRTLKHTRGHLVELMNSNNILISNLTFRNSPFWT 91
G IDGQG WW L N ++K L+++ NS + + ++T NSP +
Sbjct: 157 GAIDGQGGALLEDKKTSWWQLAAMAKNTSMKQNAPRLIQITNSTDFTLYDITLLNSPNFH 216
Query: 92 IHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYG 151
+ + + TI P +A NTDGIDP SS NV I I +GDD VA+K+ + H G
Sbjct: 217 VVFDKSNGLTVWNTTINTPRDARNTDGIDPISSENVTIAHSNISTGDDNVAIKA-YSHKG 275
Query: 152 IAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGR 211
P+ NI V + T G+ IGSE + GI++V VD L + G+RIK+D+
Sbjct: 276 -----PAQNISV--IHNTFSFGHGMSIGSE-TNGIYDVLVDDLTLNGTENGLRIKSDRSN 327
Query: 212 GGYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAP 271
G ++ + +N+ M VK PI I D E + IS+ ++ T+K
Sbjct: 328 AGEVDGVIYKNVTMTNVKNPIVI-----DTVYENKSGSQQADWKNISYQDI----TSKGS 378
Query: 272 VLAGIIGTQFEEICMKNVSLLGLAPSAKWQCQFV 305
+ + G ++ + ++ + L P+ K+ V
Sbjct: 379 GVVNLNGQNAKQKIIVKMTHVELDPATKYSVNNV 412
>gi|385788697|ref|YP_005819806.1| polygalacturonase [Erwinia sp. Ejp617]
gi|310767969|gb|ADP12919.1| polygalacturonase [Erwinia sp. Ejp617]
Length = 409
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 137/277 (49%), Gaps = 35/277 (12%)
Query: 43 GTIDGQGQM--------WWDLWW---NRTLKHTRGHLVELMNSNNILISNLTFRNSPFWT 91
G IDGQG + WW L N ++K L+++ NS + + ++T NSP +
Sbjct: 138 GVIDGQGGVLLEDKKTSWWQLAAMAKNTSMKQNAPRLIQITNSTDFTLYDITLLNSPNFH 197
Query: 92 IHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYG 151
+ + + TI P +A NTDGIDP SS NV I I +GDD VA+K+ + H G
Sbjct: 198 VVFDKSNGLTVWNTTINTPGDARNTDGIDPISSENVTIAHSNISTGDDNVAIKA-YSHKG 256
Query: 152 IAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGR 211
P+ NI V + T G+ IGSE + GI++V VD L + G+RIK+D+
Sbjct: 257 -----PAQNISV--IHNTFGFGHGMSIGSE-TNGIYDVLVDDLTLSGTENGLRIKSDRSN 308
Query: 212 GGYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDPKA-LPKI--RGISFVNVVSVNTT 268
G ++ + +N+ M VK PI I D ++ K+ L K + IS+ ++ T+
Sbjct: 309 AGEVDGVIYKNVTMTNVKNPIVI--------DTVYENKSGLQKADWKNISYQDI----TS 356
Query: 269 KAPVLAGIIGTQFEEICMKNVSLLGLAPSAKWQCQFV 305
K + + G ++ + ++ + L P+ K+ V
Sbjct: 357 KGSGMVNLNGKNAKQKIIVKMTHVELDPATKYSVNNV 393
>gi|29349563|ref|NP_813066.1| hypothetical protein BT_4155 [Bacteroides thetaiotaomicron
VPI-5482]
gi|29341473|gb|AAO79260.1| pectate lyase [Bacteroides thetaiotaomicron VPI-5482]
Length = 448
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 90/168 (53%), Gaps = 16/168 (9%)
Query: 63 HTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPD 122
H R HL+ N+++ R SPFWTIH C +++ + + A + N DGID +
Sbjct: 193 HLRPHLIHFNRCKNVMLDGFKIRESPFWTIHLYMCDGGIVRNLDVRA--HGHNNDGIDFE 250
Query: 123 SSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRR---VSGTTPTCSGVGIG 179
S N +EDC + GDD V +K+G + + P NI++R + G T +GIG
Sbjct: 251 MSRNFLVEDCSFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRNCRILKGHTL----LGIG 306
Query: 180 SEMSGGIFNVTVDQLHVWDAAAGVR----IKTDKGRGGYIENITIRNI 223
SE+SGGI N+ +H A V +KT+ RGG+IENI ++N+
Sbjct: 307 SEISGGIRNI---YMHDCTAPNSVMRLFFVKTNHRRGGFIENIYMKNV 351
>gi|312172794|emb|CBX81050.1| polygalacturonase [Erwinia amylovora ATCC BAA-2158]
Length = 398
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 114/220 (51%), Gaps = 21/220 (9%)
Query: 26 SLIHGDHLTNVIITGYNGTIDGQGQM--------WWDLWW---NRTLKHTRGHLVELMNS 74
+LI TN I G G IDGQG + WW L N LK L+++ NS
Sbjct: 123 ALITVSDATNSGIYG-KGVIDGQGGVPLEDKKTSWWQLAAMAKNSGLKQNAPRLIQITNS 181
Query: 75 NNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYI 134
+ I ++T N+P + + + + TI +P +A NTDGIDP SS NV I I
Sbjct: 182 TDFTIYDITLLNAPHFHVVFDTGNGLTVWNTTINSPRDAINTDGIDPISSKNVTIAHSNI 241
Query: 135 ESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQL 194
+GDD VA+K+ + H G P+ NI V + T G+ IGSE + GI++V VD L
Sbjct: 242 STGDDNVAIKA-YSHKG-----PAQNISV--IHNTFEFGHGMSIGSE-TNGIYDVLVDDL 292
Query: 195 HVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRI 234
+ G+RIK+D+ G ++ +T +N+ M V+ P+ I
Sbjct: 293 TLNGTENGLRIKSDRSDAGEVDGVTYKNVTMTNVRNPVVI 332
>gi|387870956|ref|YP_005802329.1| polygalacturonase [Erwinia pyrifoliae DSM 12163]
gi|283478042|emb|CAY73958.1| polygalacturonase [Erwinia pyrifoliae DSM 12163]
Length = 397
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 131/274 (47%), Gaps = 29/274 (10%)
Query: 43 GTIDGQG--------QMWWDLWW---NRTLKHTRGHLVELMNSNNILISNLTFRNSPFWT 91
G IDGQG WW L N ++K L+++ NS + + ++T NSP +
Sbjct: 138 GAIDGQGGALLEDKKTSWWQLAAMAKNTSMKQNAPRLIQITNSTDFTLYDITLLNSPNFH 197
Query: 92 IHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYG 151
+ + + TI P +A NTDGIDP SS NV I I +GDD VA+K+ + H G
Sbjct: 198 VVFDKSNGLTVWNTTINTPRDARNTDGIDPISSENVTIAHSNISTGDDNVAIKA-YSHKG 256
Query: 152 IAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDKGR 211
P+ NI V + T G+ IGSE + GI++V VD L + G+RIK+D+
Sbjct: 257 -----PAQNISV--IHNTFSFGHGMSIGSE-TNGIYDVLVDDLTLNGTENGLRIKSDRSN 308
Query: 212 GGYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAP 271
G ++ + +N+ M VK PI I D E + IS+ ++ T+K
Sbjct: 309 AGEVDGVIYKNVTMTNVKNPIVI-----DTVYENKSGSQQADWKNISYQDI----TSKGS 359
Query: 272 VLAGIIGTQFEEICMKNVSLLGLAPSAKWQCQFV 305
+ + G ++ + ++ + L P+ K+ V
Sbjct: 360 GVVNLNGQNAKQKIIVKMTHVELDPATKYSVNNV 393
>gi|325298611|ref|YP_004258528.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324318164|gb|ADY36055.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 484
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 110/220 (50%), Gaps = 21/220 (9%)
Query: 27 LIHGDHLTNVIITGYNGTIDGQGQMWWDLWW---------------NRTLKHTRGHLVEL 71
+I+ + + N +TG GTID +G+ WD +W + K RG +V
Sbjct: 140 VINFEGVQNAALTG-EGTIDCRGKFCWDKYWTMRKDYVKRGLRWIVDYDAKRIRGIVVS- 197
Query: 72 MNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPL--NAPNTDGIDPDSSTNVCI 129
S ++ + T + FW VY + + G+ I L + P+TDGID DSS+++ I
Sbjct: 198 -QSKDVTLKGFTLLRTGFWGCQLVYSGHCTVDGIRINNNLGGHGPSTDGIDVDSSSDILI 256
Query: 130 EDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNV 189
E+ YI+ DD + +K+G D G+ + RP+ +++R V IGSE SGGI NV
Sbjct: 257 ENAYIDCNDDNICLKAGRDADGLRVNRPTERVVIRNCIAAKGG-GLVTIGSETSGGIRNV 315
Query: 190 TVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVK 229
L + +R+K+ RGG +E+I + K E VK
Sbjct: 316 LAYDLESKGTSTMLRLKSAMNRGGTVEHIYVTRCKGEDVK 355
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.137 0.444
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,728,638,994
Number of Sequences: 23463169
Number of extensions: 252237245
Number of successful extensions: 501968
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2507
Number of HSP's successfully gapped in prelim test: 1373
Number of HSP's that attempted gapping in prelim test: 492635
Number of HSP's gapped (non-prelim): 4630
length of query: 331
length of database: 8,064,228,071
effective HSP length: 143
effective length of query: 188
effective length of database: 9,003,962,200
effective search space: 1692744893600
effective search space used: 1692744893600
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 77 (34.3 bits)