BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020062
(331 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A7PZL3|PGLR_VITVI Probable polygalacturonase OS=Vitis vinifera GN=GSVIVT00026920001
PE=1 SV=1
Length = 491
Score = 328 bits (842), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 165/336 (49%), Positives = 228/336 (67%), Gaps = 7/336 (2%)
Query: 1 MDEWPIIDPLPSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRT 60
+ +WP+I PLPSYGRGR+ GR+ SLI G +LT+VIITG NGTIDGQG +WW +
Sbjct: 134 ISQWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIITGDNGTIDGQGGLWWQRFHGGK 193
Query: 61 LKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGID 120
LK+TR +L+ELM S +I ISNLT NSP W +HPVY RN++I+G+TILAP+ +PNTDGI+
Sbjct: 194 LKYTRPYLIELMYSADIQISNLTLLNSPSWNVHPVYSRNILIQGITILAPVRSPNTDGIN 253
Query: 121 PDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGS 180
PDS TN IEDCYI SGDD VAVKSGWD YGIA P+ +++RR++ +P + + +GS
Sbjct: 254 PDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSAVIALGS 313
Query: 181 EMSGGIFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSND 240
EMSGGI +V + + ++ +G+RIKT GRGGY+++I +R + M+ +K ++
Sbjct: 314 EMSGGIQDVRAEDIVAINSESGIRIKTGIGRGGYVKDIYVRGMTMKTMKWAFWMTGNYGS 373
Query: 241 HPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLGLAPSAK- 299
H D +DPKA P I+GI++ ++V+ N + A L GI F IC+ NV+ + LA AK
Sbjct: 374 HADNHYDPKAFPVIQGINYRDMVAENVSMAARLEGIPSDPFTGICISNVT-IHLAAKAKK 432
Query: 300 --WQCQFVSGFTSQVFPLPCPQLQNK---SSSWCSF 330
W C V G +S V P PC L ++ +S C+F
Sbjct: 433 VPWTCTDVEGISSGVTPTPCSTLPDQGPEKTSLCNF 468
>sp|P18192|PGLR1_PECCC Endo-polygalacturonase OS=Pectobacterium carotovorum subsp.
carotovorum GN=peh PE=3 SV=1
Length = 402
Score = 105 bits (261), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 94/277 (33%), Positives = 133/277 (48%), Gaps = 33/277 (11%)
Query: 43 GTIDGQGQM--------WWDLWWN---RTLKHTRGHLVELMNSNNILISNLTFRNSPFWT 91
GTIDGQG + WWDL + + LK L+++ S N + N++ NSP +
Sbjct: 143 GTIDGQGGVKLQDKKVSWWDLAADAKVKKLKQNTPRLIQINKSKNFTLYNVSLINSPNF- 201
Query: 92 IHPVYCRNVVIKG--MTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDH 149
H V+ TI P A NTDGIDP SS N+ I I +GDD VA+K+ +
Sbjct: 202 -HVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAHSNISTGDDNVAIKA---Y 257
Query: 150 YGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDK 209
G + R S I+ G T G+ IGSE + G++NVTVD L + G+RIK+DK
Sbjct: 258 KGRSETRNIS--ILHNEFG---TGHGMSIGSE-TMGVYNVTVDDLIMTGTTNGLRIKSDK 311
Query: 210 GRGGYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTK 269
G + + N+ M+ V PI I D E + +P I+F ++ S T
Sbjct: 312 SAAGVVNGVRYSNVVMKNVAKPIVI-----DTVYEKKEGSNVPDWSDITFKDITS-QTKG 365
Query: 270 APVLAGIIGTQFEEICMKNVSLLGLAPSAKWQCQFVS 306
VL G + E+ MKNV L + WQ + V+
Sbjct: 366 VVVLNGENAKKPIEVTMKNVK---LTSDSTWQIKNVT 399
>sp|P26509|PGLR2_PECSS Endo-polygalacturonase OS=Pectobacterium sp. (strain SCC3193)
GN=pehA PE=1 SV=1
Length = 402
Score = 103 bits (258), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/276 (34%), Positives = 132/276 (47%), Gaps = 33/276 (11%)
Query: 43 GTIDGQGQM--------WWDLWWN---RTLKHTRGHLVELMNSNNILISNLTFRNSPFWT 91
GTIDGQG + WW+L + + LK L+++ S N + N++ NSP +
Sbjct: 143 GTIDGQGGVKLQDKKVSWWELAADAKVKKLKQNTPRLIQINKSKNFTLYNVSLINSPNF- 201
Query: 92 IHPVYCRNVVIKG--MTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDH 149
H V+ TI P A NTDGIDP SS N+ I I +GDD VA+K+ +
Sbjct: 202 -HVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAYSNIATGDDNVAIKA---Y 257
Query: 150 YGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHVWDAAAGVRIKTDK 209
G A R S I+ G T G+ IGSE + G++NVTVD L + G+RIK+DK
Sbjct: 258 KGRAETRNIS--ILHNDFG---TGHGMSIGSE-TMGVYNVTVDDLKMNGTTNGLRIKSDK 311
Query: 210 GRGGYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTK 269
G + + N+ M+ V PI I D E + +P I+F +V S T
Sbjct: 312 SAAGVVNGVRYSNVVMKNVAKPIVI-----DTVYEKKEGSNVPDWSDITFKDVTS-ETKG 365
Query: 270 APVLAGIIGTQFEEICMKNVSLLGLAPSAKWQCQFV 305
VL G + E+ MKNV L + WQ + V
Sbjct: 366 VVVLNGENAKKPIEVTMKNVK---LTSDSTWQIKNV 398
>sp|Q9LW07|PGLR3_ARATH Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana
GN=At3g15720 PE=1 SV=1
Length = 456
Score = 102 bits (253), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 93/310 (30%), Positives = 143/310 (46%), Gaps = 52/310 (16%)
Query: 33 LTNVIITGYNGTIDGQGQMWWDLWWNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTI 92
+ ++I G +G I+GQG WW+ K +R ++ + NN+ +S LT +SP I
Sbjct: 112 IEGLVIEG-DGEINGQGSSWWEH------KGSRPTALKFRSCNNLRLSGLTHLDSPMAHI 164
Query: 93 HPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGI 152
H C V I + I AP ++PNTDGID +S+NV I+DC I +GDD +A+ SG
Sbjct: 165 HISECNYVTISSLRINAPESSPNTDGIDVGASSNVVIQDCIIATGDDCIAINSG------ 218
Query: 153 AMARPSSNIIVRRVSGTTPTCS---GVGIGSEMSGG----IFNVTVDQLHVWDAAAGVRI 205
+SNI + + C G+ IGS G + NV V + G RI
Sbjct: 219 -----TSNIHISGID-----CGPGHGISIGSLGKDGETATVENVCVQNCNFRGTMNGARI 268
Query: 206 KTDKGRGGYIENITIRNIKMERVKIPIRISRGSN-DHPDEGWDPKALP-KIRGISFVNVV 263
KT +G GY IT I ++ V+ PI I + N D D K+ ++ + F N +
Sbjct: 269 KTWQGGSGYARMITFNGITLDNVENPIIIDQFYNGGDSDNAKDRKSSAVEVSKVVFSNFI 328
Query: 264 SVNTTKAPVLAGIIGTQFE--------EICMKNVSL----LGLAPSAKWQCQFVSGFTSQ 311
+ ++ G F EI ++++ + G A+ QC V G ++
Sbjct: 329 GTSKSE-------YGVDFRCSERVPCTEIFLRDMKIETASSGSGQVAQGQCLNVRGASTI 381
Query: 312 VFP-LPCPQL 320
P L C +L
Sbjct: 382 AVPGLECLEL 391
>sp|Q94AJ5|PGLR5_ARATH Probable polygalacturonase At1g80170 OS=Arabidopsis thaliana
GN=At1g80170 PE=1 SV=1
Length = 444
Score = 101 bits (252), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 93/313 (29%), Positives = 139/313 (44%), Gaps = 31/313 (9%)
Query: 18 ERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKHT-----RGHLVELM 72
E L R HG L+ + + G GT++G GQ WW+ R+ KH RG L
Sbjct: 129 EGLNRRKWLYFHG--LSRLTVEG-GGTVNGMGQEWWE----RSCKHNHSNPCRGAPTALT 181
Query: 73 --NSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIE 130
N+ + NL +S I CR V I G+ ++AP +PNTDGI S + I+
Sbjct: 182 FHKCKNMRVENLNVIDSQQMHIALTSCRRVTISGLKVIAPATSPNTDGIHISVSRGIVID 241
Query: 131 DCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVT 190
+ + +GDD +++ I SNII G + G E + ++T
Sbjct: 242 NTTVSTGDDCISIVKNSTQISI------SNIICGPGHGISIGSLGKSKSWEE---VRDIT 292
Query: 191 VDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDPKA 250
VD + D A GVRIKT +G G + I RNIKM V PI I + D + +
Sbjct: 293 VDTAIISDTANGVRIKTWQGGSGLVSKIIFRNIKMNNVSNPIIIDQYYCDSRKPCANQTS 352
Query: 251 LPKIRGISFVNVVSVNTTKAPV-LAGIIGTQFEEICMKNVSLL-----GLAPSAKWQCQF 304
I ISFV+V + +K + ++ + I ++++ L G S W+
Sbjct: 353 AISIENISFVHVRGTSASKEAIKISCSDSSPCRNILLQDIDLEPSNGDGFTESFCWEAYG 412
Query: 305 VSGFTSQVFPLPC 317
S + QV+P PC
Sbjct: 413 SS--SGQVYPPPC 423
>sp|Q9FY19|PGLR2_JUNAS Polygalacturonase OS=Juniperus ashei GN=JNA2 PE=1 SV=1
Length = 507
Score = 98.6 bits (244), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 125/254 (49%), Gaps = 22/254 (8%)
Query: 28 IHGDHLTNVIITGYNGTIDGQGQMWWDLWWN----RTLKHTRGH--LVELMNSNNILISN 81
+H LT+ + G G IDGQG WW RT+ + +G +++ S ++ +
Sbjct: 141 MHFARLTDFNLMG-TGVIDGQGNRWWSDQCKTINGRTVCNDKGRPTAIKIDFSKSVTVKE 199
Query: 82 LTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLV 141
LT NSP + + C V I+G+ I AP ++PNTDGID +S IE C I +GDD V
Sbjct: 200 LTLTNSPEFHLVFGECDGVKIQGIKIKAPRDSPNTDGIDIFASKRFEIEKCTIGTGDDCV 259
Query: 142 AVKSGWDHYGIAMARPSSNIIVRRVS---GTTPTCSGVGIGSEMSGGIFNVTVDQLHVWD 198
AV +G SSNI ++ ++ G + +G G+ S F V +D D
Sbjct: 260 AVGTG-----------SSNITIKDLTCGPGHGMSIGSLGKGNSRSEVSF-VHLDGAKFID 307
Query: 199 AAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDPKALPKIRGIS 258
G+RIKT +G G +IT N++M + PI I++ + ++ KI+ ++
Sbjct: 308 TQNGLRIKTWQGGSGLASHITYENVEMINAENPILINQFYCTSAAACKNQRSAVKIQDVT 367
Query: 259 FVNVVSVNTTKAPV 272
F N+ + T A +
Sbjct: 368 FKNIHGTSATTAAI 381
>sp|Q7M1E7|PGLR2_CHAOB Polygalacturonase OS=Chamaecyparis obtusa PE=1 SV=1
Length = 514
Score = 98.6 bits (244), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 124/254 (48%), Gaps = 30/254 (11%)
Query: 32 HLTNVIITGYNGTIDGQGQMWW----DLWWNRTLKHTRGH--LVELMNSNNILISNLTFR 85
LT+ + G G IDGQGQ WW + RT+ + R +++ S ++ + LT
Sbjct: 144 QLTDFNLMG-TGVIDGQGQQWWAGQCKVVNGRTVCNDRNRPTAIKIDYSKSVTVKELTLM 202
Query: 86 NSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKS 145
NSP + + C V I+G+ I AP ++PNTDGID +S IE C I +GDD +A+ +
Sbjct: 203 NSPEFHLVFGECEGVKIQGLKIKAPRDSPNTDGIDIFASKRFHIEKCVIGTGDDCIAIGT 262
Query: 146 GWDHYGIAMARPSSNIIVRRVSGTTPTCS---GVGIGS----EMSGGIFNVTVDQLHVWD 198
G SSNI ++ + C G+ IGS + +V V++ D
Sbjct: 263 G-----------SSNITIKDL-----ICGPGHGISIGSLGRDNSRAEVSHVHVNRAKFID 306
Query: 199 AAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDPKALPKIRGIS 258
G+RIKT +G G IT N++M + PI I++ + ++ +I+G++
Sbjct: 307 TQNGLRIKTWQGGSGLASYITYENVEMINSENPILINQFYCTSASACQNQRSAVQIQGVT 366
Query: 259 FVNVVSVNTTKAPV 272
+ N+ + T A +
Sbjct: 367 YKNIHGTSATAAAI 380
>sp|P27644|PGLR_RHIRD Polygalacturonase OS=Rhizobium radiobacter GN=pgl PE=2 SV=1
Length = 312
Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 108/222 (48%), Gaps = 18/222 (8%)
Query: 69 VELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVC 128
+ L++ + + T RN+ WTIHP C ++ TI+AP ++PNTDG +P+S NV
Sbjct: 25 LHLVSCHKTQLLGFTIRNAASWTIHPQGCEDLTAAASTIIAPHDSPNTDGFNPESCRNVM 84
Query: 129 IEDCYIESGDDLVAVKSGW-------DHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSE 181
I GDD +AVK+G DH + I VR P G+ IGSE
Sbjct: 85 ISGVRFSVGDDCIAVKAGKRGPDGEDDHLA-----ETRGITVRHCL-MQPGHGGLVIGSE 138
Query: 182 MSGGIFNVTVDQLHVWDAAAGVRIKTD-KGRGGYIENITIRNIKMERVKIPIRISR---- 236
MSGG+ +VTV+ + G+R+KT + GG + NIT+R + ++ V+ + +
Sbjct: 139 MSGGVHDVTVEDCDMIGTDRGLRLKTGARSGGGMVGNITMRRVLLDGVQTALSANAHYHC 198
Query: 237 GSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPVLAGIIG 278
++ H D P G FV+ ++V + LA G
Sbjct: 199 DADGHDDWVQSRNPAPVNDGTPFVDGITVEDVEIRNLAHAAG 240
>sp|P05117|PGLR_SOLLC Polygalacturonase-2 OS=Solanum lycopersicum GN=PG2 PE=1 SV=1
Length = 457
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 109/230 (47%), Gaps = 26/230 (11%)
Query: 73 NSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDC 132
N N+ ++NL +N+ I C NVV + I A +PNTDG+ ++ + I D
Sbjct: 205 NCKNLKVNNLKSKNAQQIHIKFESCTNVVASNLMINASAKSPNTDGVHVSNTQYIQISDT 264
Query: 133 YIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCS---GVGIGSEMSGG---- 185
I +GDD +++ SG + V T TC G+ IGS SG
Sbjct: 265 IIGTGDDCISIVSG----------------SQNVQATNITCGPGHGISIGSLGSGNSEAY 308
Query: 186 IFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPDEG 245
+ NVTV++ + A GVRIKT +G G NI N++M+ VK PI I + D +
Sbjct: 309 VSNVTVNEAKIIGAENGVRIKTWQGGSGQASNIKFLNVEMQDVKYPIIIDQNYCDRVEPC 368
Query: 246 WDPKALPKIRGISFVNVVSVNTTKAPVLAGIIGTQF--EEICMKNVSLLG 293
+ +++ + + N+ + TK + T F E I M+N++L+G
Sbjct: 369 IQQFSAVQVKNVVYENIKGTSATKVAIKFD-CSTNFPCEGIIMENINLVG 417
>sp|Q02096|PGLR_PERAE Polygalacturonase OS=Persea americana PE=2 SV=1
Length = 462
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 121/255 (47%), Gaps = 27/255 (10%)
Query: 28 IHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLK---HTRGHLVELMNSNNILISNLTF 84
I + ++N+ + G GT +G G+ WWD R + + + N+++S+L+
Sbjct: 166 IEFEDISNLTLEG-GGTSNGNGETWWDSSCKRKKSLPCKSAPTALTFRSCKNLIVSDLSI 224
Query: 85 RNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVK 144
++S + C++V+ + + AP ++PNTDGI + + + + I +GDD ++++
Sbjct: 225 KDSQKMHLSFDKCQDVIASNLMVTAPEHSPNTDGIHITGTQRIHVMNSVIGTGDDCISIE 284
Query: 145 SGWDHYGIAMARPSSNIIVRRVSGTTPTCS---GVGIGS----EMSGGIFNVTVDQLHVW 197
SG + V T TC G+ IGS + V VD +++
Sbjct: 285 SG----------------SKMVIATNITCGPGHGISIGSLGDRNSEAHVSGVLVDGGNLF 328
Query: 198 DAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDPKALPKIRGI 257
D G+RIKT +G G +NI +NI M V PI I + D D + ++ K+ +
Sbjct: 329 DTTNGLRIKTWQGGSGSAKNIKFQNIVMHNVTNPIIIDQYYCDSKDPCPEQESAVKVSNV 388
Query: 258 SFVNVVSVNTTKAPV 272
+++N+ + ++ V
Sbjct: 389 AYMNIRGTSASEVAV 403
>sp|P35336|PGLR_ACTDE Polygalacturonase OS=Actinidia deliciosa PE=2 SV=1
Length = 467
Score = 85.9 bits (211), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 115/258 (44%), Gaps = 29/258 (11%)
Query: 15 RGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWD--LWWNRTLKHTRG-HLVEL 71
R R GRH + D + N+ + G GTI+G G++WW N+ L +
Sbjct: 160 RSDYRKDGRHWLVF--DSVQNLRVEG-GGTINGNGKIWWQNSCKTNKALPCKDAPTALTF 216
Query: 72 MNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIED 131
S ++++ NL N+ + C NV + + AP N+PNTDGI + N+ I
Sbjct: 217 YKSKHVIVKNLKIENAQQIHVSFDNCVNVQASNLMVTAPENSPNTDGIHVTGTQNIHISS 276
Query: 132 CYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCS---GVGIGSEMSGG--- 185
C I +GDD +++ +G R+V TC G+ IGS G
Sbjct: 277 CVIGTGDDCISIVNG----------------SRKVRVNDITCGPGHGISIGSLGYGNSEA 320
Query: 186 -IFNVTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPDE 244
+ +V V+ + GVRIKT +G G NI +N++M V+ PI I + D
Sbjct: 321 HVSDVVVNGAKLCGTTNGVRIKTWQGGSGSASNIKFQNVEMHNVENPIIIDQNYCDQDKP 380
Query: 245 GWDPKALPKIRGISFVNV 262
+ + +++ + + N+
Sbjct: 381 CQEQSSAVQVKNVVYQNI 398
>sp|Q9SFB7|QRT2_ARATH Polygalacturonase QRT2 OS=Arabidopsis thaliana GN=QRT2 PE=1 SV=2
Length = 439
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 126/272 (46%), Gaps = 30/272 (11%)
Query: 31 DHLTNVIITGYNGTIDGQGQMWW--DLWWNRTLKHTRG-HLVELMNSNNILISNLTFRNS 87
+++ N+ + G G IDG G +WW N L V + NN+ +SN+ N+
Sbjct: 156 ENVNNLRVEG-GGRIDGNGHIWWPKSCKINPQLPCLGAPTAVTFVECNNLRVSNIRLENA 214
Query: 88 PFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGW 147
+ C+NV + + +P ++PNTDGI + N+ I+D + +GDD +++ SG
Sbjct: 215 QQMHLTFQDCKNVKALNLMVTSPADSPNTDGIHVSGTQNILIQDSIVRTGDDCISIVSGS 274
Query: 148 DHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGS----EMSGGIFNVTVDQLHVWDAAAGV 203
++ VR T G+ IGS + NV V++ + GV
Sbjct: 275 EN-------------VRATGITCGPGHGISIGSLGEDNSEAYVSNVVVNKATLIGTTNGV 321
Query: 204 RIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDPKALPKIRGISFVNVV 263
RIKT +G G +NI ++I M+ V PI I++ D + + K+ ++ + + N+
Sbjct: 322 RIKTWQGGHGMAKNIIFQDIIMKNVTNPIIINQDYCDRVEACPEQKSAVQVSNVLYKNIQ 381
Query: 264 SVNTTKAPVLAGIIGTQFEEICMKNVSLLGLA 295
T+ P I +F +C KN+ G++
Sbjct: 382 G--TSSRP-----IAVKF--VCSKNIPCRGIS 404
>sp|P43212|PGLR2_CRYJA Polygalacturonase OS=Cryptomeria japonica PE=1 SV=1
Length = 514
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 118/248 (47%), Gaps = 20/248 (8%)
Query: 33 LTNVIITGYNGTIDGQGQMWWD---LWWN-RTLKHTRGH--LVELMNSNNILISNLTFRN 86
LT + G G IDGQG+ WW W N R + + R ++ S ++I L N
Sbjct: 145 LTGFTLMG-KGVIDGQGKQWWAGQCKWVNGREICNDRDRPTAIKFDFSTGLIIQGLKLMN 203
Query: 87 SPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSG 146
SP + + C V I G++I AP ++PNTDGID +S N ++ I +GDD VA+ +G
Sbjct: 204 SPEFHLVFGNCEGVKIIGISITAPRDSPNTDGIDIFASKNFHLQKNTIGTGDDCVAIGTG 263
Query: 147 WDHYGIAMARPSSNIIVRR-VSGTTPTCSGVGIGSEMS-GGIFNVTVDQLHVWDAAAGVR 204
SSNI++ + G S +G E S + V V+ D G+R
Sbjct: 264 -----------SSNIVIEDLICGPGHGISIGSLGRENSRAEVSYVHVNGAKFIDTQNGLR 312
Query: 205 IKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVS 264
IKT +G G +I N++M + PI I++ + ++ +I+ +++ N+
Sbjct: 313 IKTWQGGSGMASHIIYENVEMINSENPILINQFYCTSASACQNQRSAVQIQDVTYKNIRG 372
Query: 265 VNTTKAPV 272
+ T A +
Sbjct: 373 TSATAAAI 380
>sp|P48978|PGLR_MALDO Polygalacturonase OS=Malus domestica PE=2 SV=1
Length = 460
Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 116/246 (47%), Gaps = 33/246 (13%)
Query: 31 DHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKHTRGHL----VELMNSNNILISNLTFRN 86
D++ N+++ G GTI+G G +WW + G V NN+++ NL ++
Sbjct: 182 DNVQNLLVVGP-GTINGNGNIWWKNSCKIKPQPPCGTYAPTAVTFNRCNNLVVKNLNIQD 240
Query: 87 SPFWTIHPVY--CRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVK 144
+ IH ++ C NV +T+ AP ++PNTDGI ++ N+ I I +GDD +++
Sbjct: 241 A--QQIHVIFQNCINVQASCLTVTAPEDSPNTDGIHVTNTQNITISSSVIGTGDDCISIV 298
Query: 145 SGWDHYGIAMARPSSNIIVRRVSGTTPTCS---GVGIGSEMSGG----IFNVTVDQLHVW 197
SG +RV T TC G+ IGS G + V V+ +
Sbjct: 299 SG----------------SQRVQATDITCGPGHGISIGSLGEDGSEDHVSGVFVNGAKLS 342
Query: 198 DAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPDEGW-DPKALPKIRG 256
+ G+RIKT KG G NI +N++M V PI I + DH + K+ +++
Sbjct: 343 GTSNGLRIKTWKGGSGSATNIVFQNVQMNDVTNPIIIDQNYCDHKTKDCKQQKSAVQVKN 402
Query: 257 ISFVNV 262
+ + N+
Sbjct: 403 VLYQNI 408
>sp|O22818|PGLR6_ARATH Probable polygalacturonase At2g43860 OS=Arabidopsis thaliana
GN=At2g43860 PE=2 SV=1
Length = 405
Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 129/294 (43%), Gaps = 40/294 (13%)
Query: 41 YNGTIDGQGQMWWDLWWNRTLKHTRG-HLVELMNSNNILISNLTFRNSPFWTIHPVYCRN 99
Y G +D QG W N G + SNNI IS LT NS + I N
Sbjct: 127 YGGILDAQGTSLWKCKNNGGHNCPTGAKSLVFSGSNNIKISGLTSINSQKFHIVIDNSNN 186
Query: 100 VVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSS 159
V I G+ + A N+PNTDGI +SS +V I + I +GDD +++ G S+
Sbjct: 187 VNIDGVKVSADENSPNTDGIHVESSHSVHITNSRIGTGDDCISIGPG-----------ST 235
Query: 160 NIIVRRVSGTTPTCS---GVGIGS----EMSGGIFNVTVDQLHVWDAAAGVRIKT-DKGR 211
N+ ++ + C G+ IGS E G+ NVTV + GVRIKT K
Sbjct: 236 NVFIQTIR-----CGPGHGISIGSLGRAEEEQGVDNVTVSNVDFMGTNNGVRIKTWGKDS 290
Query: 212 GGYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDPKALPKIRG---ISFVNVVSVNTT 268
+ NI ++I M+ VK PI I + H K PK +S V ++ T
Sbjct: 291 NSFARNIVFQHINMKMVKNPIIIDQHYCLH-------KPCPKQESGVKVSNVRYEDIHGT 343
Query: 269 KAPVLAGIIGTQFEEIC----MKNVSLLGLAPSAKWQCQFVSGFTSQVFPL-PC 317
+A ++ E+ C M +V+L+ + A+ C +G + V P PC
Sbjct: 344 SNTEVAVLLDCSKEKPCTGIVMDDVNLVSVHRPAQASCDNANGSANDVVPFTPC 397
>sp|O23147|ADPG1_ARATH Polygalacturonase ADPG1 OS=Arabidopsis thaliana GN=ADPG1 PE=2 SV=1
Length = 431
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 122/271 (45%), Gaps = 28/271 (10%)
Query: 40 GYNGTIDGQGQMWWD--LWWNRTLKHTRG-HLVELMNSNNILISNLTFRNSPFWTIHPVY 96
G G I+G G+ WW +++ T+ + L N N+ + NL +N+ I
Sbjct: 163 GSTGIINGNGKTWWQNSCKIDKSKPCTKAPTALTLYNLKNLNVKNLRVKNAQQIQISIEK 222
Query: 97 CRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMAR 156
C V + + I AP ++PNTDGI ++ N+ + + I +GDD ++++ G + I
Sbjct: 223 CNKVEVSNVEITAPGDSPNTDGIHITNTQNIRVSNSDIGTGDDCISIEDGTQNLQIF--- 279
Query: 157 PSSNIIVRRVSGTTPTCS---GVGIGS----EMSGGIFNVTVDQLHVWDAAAGVRIKTDK 209
TC G+ IGS + + VD ++ GVRIKT +
Sbjct: 280 -------------DLTCGPGHGISIGSLGDDNSKAYVSGINVDGAKFSESDNGVRIKTYQ 326
Query: 210 GRGGYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTK 269
G G +NI +NI+ME VK PI I + D D+ D ++ +++ + + N+ + T
Sbjct: 327 GGSGTAKNIKFQNIRMENVKNPIIIDQDYCDK-DKCEDQESAVQVKNVVYKNISGTSATD 385
Query: 270 APVLAGIIGTQ-FEEICMKNVSLLGLAPSAK 299
+ + I ++NV + G S K
Sbjct: 386 VAITLNCSEKYPCQGIVLENVKIKGGTASCK 416
>sp|Q8RY29|ADPG2_ARATH Polygalacturonase ADPG2 OS=Arabidopsis thaliana GN=ADPG2 PE=2 SV=2
Length = 433
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 110/234 (47%), Gaps = 32/234 (13%)
Query: 40 GYNGTIDGQGQMWWD--LWWNRTLKHTRG-HLVELMNSNNILISNLTFRNSPFWTIHPVY 96
G G +DG G+ WW N+ T+ + NS ++++ NL RN+ I
Sbjct: 163 GDTGVVDGNGETWWQNSCKRNKAKPCTKAPTALTFYNSKSLIVKNLKVRNAQQIQISIEK 222
Query: 97 CRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMAR 156
C NV + + + AP ++PNTDGI ++ N+ + + I +GDD ++++SG
Sbjct: 223 CSNVQVSNVVVTAPADSPNTDGIHITNTQNIRVSESIIGTGDDCISIESG---------- 272
Query: 157 PSSNIIVRRVSGTTPTCS---GVGIGS----EMSGGIFNVTVDQLHVWDAAAGVRIKTDK 209
S N+ + + TC G+ IGS + VTVD + GVRIKT +
Sbjct: 273 -SQNVQINDI-----TCGPGHGISIGSLGDDNSKAFVSGVTVDGAKLSGTDNGVRIKTYQ 326
Query: 210 GRGGYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDPKALPKIRGISFVNVV 263
G G NI +NI+M+ VK PI I + D+ D+ K + + NVV
Sbjct: 327 GGSGTASNIIFQNIQMDNVKNPIIIDQ---DYCDK---SKCTTEKSAVQVKNVV 374
>sp|Q949Z1|PGLR4_ARATH Polygalacturonase At1g48100 OS=Arabidopsis thaliana GN=At1g48100
PE=2 SV=1
Length = 475
Score = 79.0 bits (193), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 98/203 (48%), Gaps = 34/203 (16%)
Query: 43 GTIDGQGQMWWDLWWNRTLKHTRG-------------HLVELMNSNNILISNLTFRNSPF 89
GT++G GQ WWDL K RG ++ SNNI + L +NSP
Sbjct: 178 GTVEGNGQKWWDL----PCKPHRGPDGSSSSGPCASPTMIRFFMSNNIEVKGLRIQNSPQ 233
Query: 90 WTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDH 149
+ + C+ V+I + I +P +PNTDGI ++ +V I + + +GDD +++ +G
Sbjct: 234 FHMKFDGCQGVLINEIQISSPKLSPNTDGIHLGNTRSVGIYNSVVSNGDDCISIGTG--- 290
Query: 150 YGIAMARPSSNIIVRRVSGTTPTCSGVGIGS----EMSGGIFNVTVDQLHVWDAAAGVRI 205
S++ ++ V T G+ IGS + N+TV + D+ G+R+
Sbjct: 291 --------CSDVDIQGV--TCGPSHGISIGSLGVHNSQACVSNITVRNTVIRDSDNGLRV 340
Query: 206 KTDKGRGGYIENITIRNIKMERV 228
KT +G G + N+ NI+ME V
Sbjct: 341 KTWQGGTGSVSNLLFENIQMENV 363
>sp|P20041|PGLR_RALSL Polygalacturonase OS=Ralstonia solanacearum GN=pglA PE=1 SV=1
Length = 529
Score = 75.9 bits (185), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 98/237 (41%), Gaps = 57/237 (24%)
Query: 43 GTIDGQGQ------------MWWDL-WWNRT--LKHTRGHLVELMNSNNILISNLTFRNS 87
G IDG+G WWD+ + N+T L L++ N + + +T +NS
Sbjct: 167 GAIDGRGGSLVTSGPNANRLTWWDIAYLNKTKGLNQQNPRLIQTYNGSAFTLYGVTVQNS 226
Query: 88 PFWTIHPVYCRNVVIKGMTILAPLNA----------------------------PNTDGI 119
P + I V G+ I+ P A NTDG
Sbjct: 227 PNFHIVTTGTSGVTAWGIKIVTPSLAYAVAGYKCPSGSTPDKVTPATCFTPETVKNTDGF 286
Query: 120 DPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIG 179
DP STNV + YI +GDD VAVK A + P+ N++ G+ IG
Sbjct: 287 DPGQSTNVVLAYSYINTGDDHVAVK--------ASSGPTRNLLFAH--NHFYYGHGLSIG 336
Query: 180 SEMSGGIFNVTVDQLHV----WDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPI 232
SE + G+ N+ V L + A G+RIK+D RGG + NI I M VK P+
Sbjct: 337 SETNTGVSNMLVTDLTMDGNDSSAGNGLRIKSDASRGGKVTNIVYDGICMRNVKEPL 393
>sp|P58598|PGLR_RALSO Polygalacturonase OS=Ralstonia solanacearum (strain GMI1000)
GN=pglA PE=3 SV=1
Length = 531
Score = 75.9 bits (185), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 91/216 (42%), Gaps = 45/216 (20%)
Query: 52 WWDL-WWNRT--LKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTIL 108
WWD+ + N+T L LV+L N + + +T +NSP + I V G+ I+
Sbjct: 190 WWDIAYLNKTKGLNQQNPRLVQLYNGSAFTLYRVTVQNSPNFHIVTTGTAGVTAWGIKIV 249
Query: 109 APLNA----------------------------PNTDGIDPDSSTNVCIEDCYIESGDDL 140
P A NTDG DP STNV + + YI +GDD
Sbjct: 250 TPSLAYTVPGYKCAAGTTPDKVTPATCFTPETVKNTDGFDPGQSTNVVLANSYISTGDDH 309
Query: 141 VAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQLHV---- 196
VA+K A + N++ G+ IGSE GG+ N+ V L +
Sbjct: 310 VAIK--------ASGGATRNLLFAH--NHFYYGHGLSIGSETDGGVSNMQVTDLAMDGND 359
Query: 197 WDAAAGVRIKTDKGRGGYIENITIRNIKMERVKIPI 232
G+RIK+D RGG + NI I M VK P+
Sbjct: 360 SSGGNGLRIKSDISRGGKVNNIVYNGICMRNVKEPL 395
>sp|Q39786|PGLR_GOSHI Polygalacturonase OS=Gossypium hirsutum GN=G9 PE=2 SV=1
Length = 407
Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 126/289 (43%), Gaps = 31/289 (10%)
Query: 43 GTIDGQGQMWWD--LWWNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNV 100
G DGQG + ++ NR + + N LI ++T ++S + I+ C+N+
Sbjct: 124 GIFDGQGSIAYEKNTCENREFRSKLPVNIRFDFLTNALIQDITSKDSKLFHINVFACKNI 183
Query: 101 VIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSN 160
++ + I AP +PNTDGI S V I I++GDD +++ G + N
Sbjct: 184 TLERLKIEAPDESPNTDGIHMGKSEGVNIIASDIKTGDDCISIGDG-----------TKN 232
Query: 161 IIVRRVSGTTPTCS---GVGIGS----EMSGGIFNVTVDQLHVWDAAAGVRIKTDKGR-G 212
++++ + TC G+ IGS + + + + + + + G RIKT G G
Sbjct: 233 MVIKEI-----TCGPGHGISIGSLGKFQNEEPVEGIKISNCTITNTSNGARIKTWPGEHG 287
Query: 213 GYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAP- 271
G + I +I M V PI I + + ++ K+ ISF N+ +
Sbjct: 288 GAVSEIHFEDITMNNVSSPILIDQQYCPWNKCKKNEESKVKLSNISFKNIRGTSALPEAI 347
Query: 272 --VLAGIIGTQFEEICMKNVSLLGLAPSAKWQCQFVSGFTS-QVFPLPC 317
+ +G Q E+ ++ G P A QC V TS ++ P+PC
Sbjct: 348 KFICSGSSPCQNVELADIDIKHNGAEP-ATSQCLNVKPITSGKLNPIPC 395
>sp|P48979|PGLR_PRUPE Polygalacturonase OS=Prunus persica PE=2 SV=1
Length = 393
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 139/317 (43%), Gaps = 43/317 (13%)
Query: 19 RLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKHTRGHL-VELMNSNNI 77
R+ G + I H+ V I+G G +DGQG W G + +SNNI
Sbjct: 101 RVIGNAANWIFFHHVNGVTISG--GILDGQGTALWACKACHGESCPSGATTLGFSDSNNI 158
Query: 78 LISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESG 137
++S L NS + I +NV ++G+ + N+PNTDGI S+ V I + I +G
Sbjct: 159 VVSGLASLNSQMFHIVINDFQNVQMQGVRVSRSGNSPNTDGIHVQMSSGVTILNSKIATG 218
Query: 138 DDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCS---GVGIGS----EMSGGIFNVT 190
DD V++ G +SN+ + V+ C G+ IGS + G+ NVT
Sbjct: 219 DDCVSIGPG-----------TSNLWIEGVA-----CGPGHGISIGSLGKEQEEAGVQNVT 262
Query: 191 VDQLHVWDAAAGVRIKT-DKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDPK 249
V + G+RIK+ + G+ NI ++ M V+ PI I + + PD P
Sbjct: 263 VKTVTFSGTQNGLRIKSWGRPSTGFARNILFQHATMVNVENPIVIDQ--HYCPDNKGCPG 320
Query: 250 ALPKIRGISFVNVVSVNTTKAPVLAGIIGTQFE--------EICMKNVSLLGLAPSAKWQ 301
+ ++ IS V ++ T A +A +F+ EI +++V L +A+
Sbjct: 321 QVSGVQ-ISDVTYEDIHGTSATEVA----VKFDCSPKHPCREIKLEDVKLTYKNQAAESS 375
Query: 302 CQFVSGFTSQVF-PLPC 317
C G T V P C
Sbjct: 376 CSHADGTTEGVVQPTSC 392
>sp|Q39766|PGLR_GOSBA Polygalacturonase OS=Gossypium barbadense GN=G9 PE=2 SV=1
Length = 407
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 125/289 (43%), Gaps = 31/289 (10%)
Query: 43 GTIDGQGQMWWD--LWWNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNV 100
G DGQG + ++ NR + + N LI ++T ++S + I+ C+N+
Sbjct: 124 GIFDGQGSIAYEKNTCENREFRSKLPVNIRFDFVTNALIQDITSKDSKLFHINVFACKNI 183
Query: 101 VIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSN 160
++ + I AP +PNTDGI S V I I++GDD +++ G + N
Sbjct: 184 TLERLKIEAPDESPNTDGIHMGKSEGVNIIASDIKTGDDCISIGDG-----------TKN 232
Query: 161 IIVRRVSGTTPTCS---GVGIGS----EMSGGIFNVTVDQLHVWDAAAGVRIKTDKGR-G 212
++++ + TC G+ IGS + + + + + + + G RIKT G G
Sbjct: 233 MVIKEI-----TCGPGHGISIGSLGKFQNEEPVEGIKISNCTITNTSNGARIKTWPGEHG 287
Query: 213 GYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAP- 271
G + I +I M V PI I + + ++ K+ ISF N+ +
Sbjct: 288 GAVSEIHFEDITMNNVSSPILIDQQYCPWNKCKKNEESKVKLSNISFKNIRGTSALPEAI 347
Query: 272 --VLAGIIGTQFEEICMKNVSLLGLAPSAKWQCQFVSGFT-SQVFPLPC 317
+ +G Q E+ ++ G P A QC V T ++ P+PC
Sbjct: 348 KFICSGSSPCQNVELADIDIQHNGAEP-ATSQCLNVKPITIGKLNPIPC 395
>sp|P35338|PGLR2_MAIZE Exopolygalacturonase OS=Zea mays GN=PG9 PE=2 SV=1
Length = 410
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 106/246 (43%), Gaps = 44/246 (17%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWWNRTLKHTRGHLVELMNS------NNILISNLTFRNSP 88
N++ITG G +DGQG W N K + L NS NN +S +T NS
Sbjct: 129 NLVITG-KGNLDGQGPAVWS--KNSCTKKYDCKI--LPNSLVMDFVNNGEVSGVTLLNSK 183
Query: 89 FWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWD 148
F+ ++ C+N++IK +T+ AP ++PNTDGI S+ + I + I GDD +++ G
Sbjct: 184 FFHMNMYQCKNMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGPG-- 241
Query: 149 HYGIAMARPSSNIIVRRVSGTTPTCS---GVGIGS----EMSGGIFNVTVDQLHVWDAAA 201
+V+ T TC G+ IGS + + ++ V +
Sbjct: 242 --------------TSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMF 287
Query: 202 GVRIKT--DKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDPKALPKIRGISF 259
GVRIK D + I NIKME PI I D + P L G S
Sbjct: 288 GVRIKAYEDAASVLTVSKIHYENIKMEDSANPIFI--------DMKYCPNKLCTANGASK 339
Query: 260 VNVVSV 265
V V V
Sbjct: 340 VTVKDV 345
>sp|P35339|PGLR3_MAIZE Exopolygalacturonase OS=Zea mays GN=PG2C PE=2 SV=1
Length = 410
Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 107/246 (43%), Gaps = 44/246 (17%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWWNRTLKHTRGHLVELMNS------NNILISNLTFRNSP 88
N++ITG G +DGQG W N +K + L NS NN +S +T NS
Sbjct: 129 NLVITG-KGKLDGQGPAVWS--KNSCVKKYDCKI--LPNSLVMDFVNNGEVSGITLLNSK 183
Query: 89 FWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWD 148
F+ ++ C++++IK + + AP ++PNTDGI S+ V I + I GDD +++ G
Sbjct: 184 FFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIGVGDDCISIGPG-- 241
Query: 149 HYGIAMARPSSNIIVRRVSGTTPTCS---GVGIGS----EMSGGIFNVTVDQLHVWDAAA 201
+V+ T TC G+ IGS + + ++ V + A
Sbjct: 242 --------------TSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTAN 287
Query: 202 GVRIKTDKGRGGYI--ENITIRNIKMERVKIPIRISRGSNDHPDEGWDPKALPKIRGISF 259
GVRIK + + I NIKME PI I D + P L G S
Sbjct: 288 GVRIKAYEDAASVLTASKIHYENIKMEDSGYPIII--------DMKYCPNKLCTANGASK 339
Query: 260 VNVVSV 265
V V V
Sbjct: 340 VTVKDV 345
>sp|P26216|PGLR1_MAIZE Exopolygalacturonase OS=Zea mays GN=PG1 PE=1 SV=1
Length = 410
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 106/246 (43%), Gaps = 44/246 (17%)
Query: 35 NVIITGYNGTIDGQGQMWWDLWWNRTLKHTRGHLVELMNS------NNILISNLTFRNSP 88
N++ITG G +DGQG W N K + L NS NN +S +T NS
Sbjct: 129 NLVITG-KGNLDGQGPAVWS--KNSCTKKYDCKI--LPNSLVMDFVNNGEVSGVTLLNSK 183
Query: 89 FWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWD 148
F+ ++ C++++IK +T+ AP ++PNTDGI S+ + I + I GDD +++ G
Sbjct: 184 FFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGPG-- 241
Query: 149 HYGIAMARPSSNIIVRRVSGTTPTCS---GVGIGS----EMSGGIFNVTVDQLHVWDAAA 201
+V+ T TC G+ IGS + + ++ V +
Sbjct: 242 --------------TSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMF 287
Query: 202 GVRIKT--DKGRGGYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDPKALPKIRGISF 259
GVRIK D + I NIKME PI I D + P L G S
Sbjct: 288 GVRIKAYEDAASVLTVSKIHYENIKMEDSANPIFI--------DMKYCPNKLCTANGASK 339
Query: 260 VNVVSV 265
V V V
Sbjct: 340 VTVKDV 345
>sp|A1DBR6|PGLRD_NEOFI Probable endopolygalacturonase D OS=Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=pgaD
PE=3 SV=1
Length = 472
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 111/255 (43%), Gaps = 48/255 (18%)
Query: 34 TNVIITGYNG-TIDGQGQMWWDLWWNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTI 92
T+V ITG +G IDG G +WD + H + + I NL +N P
Sbjct: 195 TDVTITGADGHVIDGNGAAYWDGKGSNGGSSKPDHFIVAKHMYYSRIENLNIQNWPVHCF 254
Query: 93 HPVYCRNVVIKGMTIL-----APLNAP-------NTDGIDPDSSTNVCIEDCYIESGDDL 140
+ N++I G+T+ AP +A N+DG D SSTN+ +++ ++ + DD
Sbjct: 255 DIEHTENLIISGITLDNSAGDAPNSASGSKPAAHNSDGFDIKSSTNLTLQNSWVHNQDDC 314
Query: 141 VAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSG-----VG-IGSEMSGGIFNVTVDQL 194
VAV SG D I+V + C G +G IG + + VT
Sbjct: 315 VAVSSGTD------------IVVDNM-----YCYGGHGLSIGSIGGKSDNTVDGVTFSNS 357
Query: 195 HVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVK---IPIR---ISRGSNDHPDEGWDP 248
V +++ G RIK++ G G + NI NI + + I I+ ++ G P G
Sbjct: 358 QVINSSNGCRIKSNSGTTGEVSNIRYENITVSGITDYGIDIQQDYLNGGPTGKPTNGV-- 415
Query: 249 KALPKIRGISFVNVV 263
KI I+FV+V
Sbjct: 416 ----KIENITFVDVT 426
>sp|Q70HJ4|PGLR2_ASPAC Probable endopolygalacturonase II OS=Aspergillus aculeatus GN=pgaII
PE=2 SV=1
Length = 369
Score = 65.5 bits (158), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 92/220 (41%), Gaps = 39/220 (17%)
Query: 19 RLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKHTRGHLVELMNSNNIL 78
R GG+ +++ D IDG G WWD K T+ + + + +
Sbjct: 97 RFGGKQLTITQSD----------GAVIDGDGSRWWDSEGTNGGK-TKPKFMYVHDVEDST 145
Query: 79 ISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLN----APNTDGIDPDSSTNVCIEDCYI 134
I L +N+P I V NV + +TI NTDG D ST V I +
Sbjct: 146 IKGLQIKNTPVQAI-SVQATNVYLTDITIDNSDGDDNGGHNTDGFDISESTGVYISGATV 204
Query: 135 ESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSG-----VG-IGSEMSGGIFN 188
++ DD +A+ SG NI+ T TCSG +G +G + N
Sbjct: 205 KNQDDCIAINSG------------ENILF-----TGGTCSGGHGLSIGSVGGRDDNTVKN 247
Query: 189 VTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERV 228
VT+ V D+A GVRIKT G G + IT NI++ +
Sbjct: 248 VTISDSTVTDSANGVRIKTIYGDTGDVSEITYSNIQLSGI 287
>sp|P49062|PGLR1_ARATH Exopolygalacturonase clone GBGE184 OS=Arabidopsis thaliana GN=PGA3
PE=2 SV=1
Length = 422
Score = 64.7 bits (156), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 113/249 (45%), Gaps = 32/249 (12%)
Query: 31 DHLTNVIITGYNGTIDGQGQMWW--DLWWNRTLKHTRGHLVELMNSNNILISNLTFRNSP 88
+ + N+++TG GT G+G+ W D + + ++ N N+ I+ ++ N+
Sbjct: 133 ERVDNLVLTG-TGTFHGKGEAVWKADGCGKKVQCNLPPTSLKFRNMKNVEINGISSVNAK 191
Query: 89 FWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWD 148
+ + V NV I+ + + AP +PNTDGI ++ NV I D I +GDD V+V
Sbjct: 192 AFHMFLVKTENVNIQNIKLTAPAESPNTDGIHLSNADNVSILDSTIATGDDCVSV----- 246
Query: 149 HYGIAMARPSSNIIVRRVSGTTPTCS---GVGIGS----EMSGGIFNVTVDQLHVWDAAA 201
R S+N+ V RV C G+ +GS + + + V+ + +
Sbjct: 247 ------GRGSNNVTVERV-----ICGPGHGLSVGSLGKYKNEEDVSGIHVNNCTMIETDN 295
Query: 202 GVRIKTDKGRG-GYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDPKALPKIRGISFV 260
G+RIKT G +I NI M+ VK PI I + ++ G D + I I F
Sbjct: 296 GLRIKTWGGSDPSKAVDIKFENIIMQSVKNPIIIDQ---NYGSRGGDSQV--AISDILFK 350
Query: 261 NVVSVNTTK 269
N+ TK
Sbjct: 351 NIRGTTITK 359
>sp|Q5AYH4|PGLRD_EMENI Probable endopolygalacturonase D OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=pgaD PE=3 SV=1
Length = 514
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 97/217 (44%), Gaps = 40/217 (18%)
Query: 34 TNVIITGY-NGTIDGQGQMWWDLWWNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTI 92
TN+ ITG + IDG GQ +WD + H + L + N +++NL +N P
Sbjct: 239 TNLTITGTEDHVIDGNGQAYWDGQGSNGGSDKPDHFIVLKHVYNSVVANLNIQNWPVHCF 298
Query: 93 HPVYCRNVVIKGMTILAPLN------------APNTDGIDPDSSTNVCIEDCYIESGDDL 140
++ + G+T+ A N+DG D SST++ ++D + + DD
Sbjct: 299 DIENTESLTLTGITLDNSAGDEPNDSSDGDPAAHNSDGFDIKSSTDLILKDSNVYNQDDC 358
Query: 141 VAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCS---GVGIGSEMSGGIFNVTVDQL--- 194
VA+ SG +NI V + CS G+ IGS GG + TVD +
Sbjct: 359 VAITSG------------TNITVDNM-----YCSGGHGLSIGSI--GGKSDNTVDGVVFS 399
Query: 195 --HVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVK 229
V ++ G RIKT++G G + NI NI + +
Sbjct: 400 NSQVVNSQNGCRIKTNEGETGEVSNIKYENISLSGIS 436
>sp|P47180|PGLR_YEAST Polygalacturonase OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=PGU1 PE=1 SV=1
Length = 361
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 95/211 (45%), Gaps = 29/211 (13%)
Query: 28 IHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKHTRGHLVELMNSNNILISNLTFRNS 87
I G ++ V +G+ TIDGQG WWD + + V+L + ++ L +N+
Sbjct: 90 ISGSKISVVGASGH--TIDGQGAKWWDGLGDS--GKVKPKFVKLALTGTSKVTGLNIKNA 145
Query: 88 PFWTIHPVYCRNVVIKGMTILA----PLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAV 143
P C ++ I +TI NTDG D SS+NV I+ C + + DD +AV
Sbjct: 146 PHQVFSINKCSDLTISDITIDIRDGDSAGGHNTDGFDVGSSSNVLIQGCTVYNQDDCIAV 205
Query: 144 KSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGGIFNVTVDQL-----HVWD 198
SG ++ ++ G+ +GS GG + TV+ HV +
Sbjct: 206 NSGS--------------TIKFMNNYCYNGHGISVGSV--GGRSDNTVNGFWAENNHVIN 249
Query: 199 AAAGVRIKTDKGRGGYIENITIRNIKMERVK 229
+ G+RIKT +G G + N+ + K+ +K
Sbjct: 250 SDNGLRIKTVEGATGTVTNVNFISNKISGIK 280
>sp|P24548|PGLR_OENOR Exopolygalacturonase (Fragment) OS=Oenothera organensis PE=2 SV=1
Length = 362
Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 104/241 (43%), Gaps = 27/241 (11%)
Query: 43 GTIDGQGQMWW---DLWWNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRN 99
G DGQG+ W D N + T + L N ++ ++T +S + ++ + C+N
Sbjct: 81 GVFDGQGKSAWVQNDCHKNGPICKTLSMNLRLYAVTNSILRDVTTLDSKNFHVNVIGCKN 140
Query: 100 VVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSS 159
+ + I A + NTDGI S V I + I++GDD +++ G S
Sbjct: 141 LTFERFKISAAETSINTDGIHIGRSDGVNIINTEIKTGDDCISLGDG-----------SK 189
Query: 160 NIIVRRVSGTTPTCS---GVGIGS----EMSGGIFNVTVDQLHVWDAAAGVRIKT-DKGR 211
NI + + TC G+ +GS + + + V + + GVRIKT K
Sbjct: 190 NINITNI-----TCGPGHGISVGSLGRYKNEESVVGIYVKNCTITGSQNGVRIKTWPKSE 244
Query: 212 GGYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAP 271
G + ++I M V PI I +G + + + K+ ISF N+ +TTK
Sbjct: 245 PGEASEMHFQDITMNSVGTPILIDQGYCPYNQCTAEVPSSVKLSKISFKNIKGTSTTKEA 304
Query: 272 V 272
V
Sbjct: 305 V 305
>sp|Q40312|PGLR_MEDSA Polygalacturonase OS=Medicago sativa PE=2 SV=1
Length = 421
Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 122/280 (43%), Gaps = 43/280 (15%)
Query: 11 PSYGRGRERLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLW-----WNRTLKHTR 65
PS +G E+ ++ DHLT ++G G DGQG + W+ +++
Sbjct: 94 PSVIKGTEQW----FKFLYMDHLT---LSG-KGVFDGQGATVYKKAAPASAWSGKNSNSK 145
Query: 66 GHLVELMN-SNNILISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSS 124
+ N NN ++ +T ++S + + C+N+ G TI AP ++PNTDGI S
Sbjct: 146 VFMNFGFNFVNNSIVRGVTSKDSKNFHVMVFGCKNITFDGFTITAPGDSPNTDGIHMGKS 205
Query: 125 TNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCS---GVGIGS- 180
T+V I + I +GDD V++ G S I V+ V+ C G+ +GS
Sbjct: 206 TDVKILNTNIGTGDDCVSIGDG-----------SKQITVQGVN-----CGPGHGLSVGSL 249
Query: 181 ---EMSGGIFNVTVDQLHVWDAAAGVRIKT--DKGRGGYIENITIRNIKMERVKIPIRIS 235
+ +TV + GVRIKT D + +I +I M VK P+ I
Sbjct: 250 GKFTTEENVEGITVKNCTLTATDNGVRIKTWPDAPGTITVSDIHFEDITMTNVKNPVIID 309
Query: 236 RGSNDHPDEGWDPKALPKIR--GISFVNVVSVNTTKAPVL 273
+ +P K KI+ ISF NV + T V+
Sbjct: 310 Q--EYYPWNQCSKKNPSKIKLSKISFKNVKGTSGTAEGVV 347
>sp|A1DLC1|PGLRX_NEOFI Probable exopolygalacturonase X OS=Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=pgaX
PE=3 SV=2
Length = 432
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 102/238 (42%), Gaps = 44/238 (18%)
Query: 19 RLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKHTRGHLVELMNSNNIL 78
+LGG+ +++ G GT DG GQ+W+DL+ L R L ++
Sbjct: 135 QLGGQDVNVYGG------------GTFDGNGQVWYDLYAEDALI-LRPILFGIIGLKGGT 181
Query: 79 ISNLTFRNSPFWTIHPVYCRNVVIKGMTIL----APLNAPNTDGIDPDSSTNVCIEDCYI 134
I L R SP W +V+ G+ I + A NTDG D S N+ I++ I
Sbjct: 182 IGPLKLRYSPQWYQLVANSSDVIFDGIDISGYSSSKNEAKNTDGWDTYRSDNIVIQNSVI 241
Query: 135 ESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGG---IFNVTV 191
+GDD V+ K S+NIIV+ + VG + G + NV V
Sbjct: 242 NNGDDCVSFKPN-----------STNIIVQNLHCNGSHGISVGSLGQYKGEVDIVQNVLV 290
Query: 192 DQLHVWDAAAGVRIKT-----------DKGRGGY--IENITIRNIKMERVKIPIRISR 236
+ +++A+ G RIK +G GG ++NIT + +E V I +++
Sbjct: 291 YNISMYNASDGARIKVWPGVSSAMSEDLQGGGGLGSVKNITYNQMYIENVDWAIEVTQ 348
>sp|Q07181|PGLR_GIBFU Polygalacturonase OS=Gibberella fujikuroi GN=PGA PE=1 SV=1
Length = 373
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 100/225 (44%), Gaps = 54/225 (24%)
Query: 34 TNVIITGYNG-TIDGQGQMWWD-LWWNRTLKHTRGHLVELMNSN-NILISNLTFRNSPFW 90
+N+ ITG +G IDG GQ +WD N H + + + N I+NL +N W
Sbjct: 93 SNITITGASGHVIDGNGQAYWDGKGSNSNSNQKPDHFIVVQKTTGNSKITNLNIQN---W 149
Query: 91 TIHPVYCRNVVIKGMTILAPL------------------NAPNTDGIDPDSSTNVCIEDC 132
PV+C ++ ++ L A NTDG D SS +V +++
Sbjct: 150 ---PVHCFDITGSSQLTISGLILDNRAGDKPNAKSGSLPAAHNTDGFDISSSDHVTLDNN 206
Query: 133 YIESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCS---GVGIGSEMSGGIFNV 189
++ + DD VAV SG +NI+V + CS G+ IGS GG +
Sbjct: 207 HVYNQDDCVAVTSG------------TNIVVSNM-----YCSGGHGLSIGSV--GGKSDN 247
Query: 190 TVDQL-----HVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVK 229
VD + V ++ G RIK++ G G I N+T +NI + +
Sbjct: 248 VVDGVQFLSSQVVNSQNGCRIKSNSGATGTINNVTYQNIALTNIS 292
>sp|P49063|PGLR2_ARATH Exopolygalacturonase clone GBGA483 OS=Arabidopsis thaliana
GN=At3g07850 PE=1 SV=2
Length = 444
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 98/225 (43%), Gaps = 30/225 (13%)
Query: 24 HISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKHTRGHL----VELMNSNNILI 79
H I +++ + + G DGQG + W N K + + + N I
Sbjct: 145 HAGWIDFENIADFTLNGNKAIFDGQGSLAWK--ANDCAKTGKCNSLPINIRFTGLTNSKI 202
Query: 80 SNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDD 139
+++T NS + ++ + C+N+ + + I AP + NTDGI S V + I++GDD
Sbjct: 203 NSITSTNSKLFHMNILNCKNITLSDIGIDAPPESLNTDGIHIGRSNGVNLIGAKIKTGDD 262
Query: 140 LVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCS---GVGIGS----EMSGGIFNVTVD 192
V++ G + N+IV V C G+ IGS + VTV
Sbjct: 263 CVSIGDGTE-----------NLIVENVE-----CGPGHGISIGSLGRYPNEQPVKGVTVR 306
Query: 193 QLHVWDAAAGVRIKTDKGR-GGYIENITIRNIKMERVKIPIRISR 236
+ + + GVRIKT G G NI +I M+ V +P+ I +
Sbjct: 307 KCLIKNTDNGVRIKTWPGSPPGIASNILFEDITMDNVSLPVLIDQ 351
>sp|Q6H9K0|PGLR2_PLAAC Exopolygalacturonase (Fragment) OS=Platanus acerifolia GN=plaa2
PE=1 SV=1
Length = 377
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 106/242 (43%), Gaps = 28/242 (11%)
Query: 43 GTIDGQGQMWW---DLWWNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRN 99
GT+DGQGQ W + N KH +L + ++ ++T NS + I+ + C +
Sbjct: 103 GTLDGQGQTAWAKNNCDKNPNCKHAAMNL-RFDFLKHAMVRDITSLNSKMFHINVLECED 161
Query: 100 VVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSS 159
+ + +T+ AP + NTDGI S V I + I +GDD +++ G S
Sbjct: 162 ITFQHVTVTAPGTSINTDGIHVGISKGVTITNTKIATGDDCISIGPG-----------SQ 210
Query: 160 NIIVRRVSGTTPTCS---GVGIGS----EMSGGIFNVTVDQLHVWDAAAGVRIKT-DKGR 211
N+ + +V+ C G+ IGS + +TV GVR+KT
Sbjct: 211 NVTITQVN-----CGPGHGISIGSLGRYNNEKEVRGITVKGCTFSGTMNGVRVKTWPNSP 265
Query: 212 GGYIENITIRNIKMERVKIPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAP 271
G ++T +++ M V+ P+ + + + + K+ I+F N+ +T K
Sbjct: 266 PGAATDLTFQDLTMNNVQNPVILDQEYCPYGQCSRQAPSRIKLSNINFNNIRGTSTGKVA 325
Query: 272 VL 273
V+
Sbjct: 326 VV 327
>sp|Q4WCZ8|PGLRX_ASPFU Probable exopolygalacturonase X OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=pgaX
PE=3 SV=2
Length = 432
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 102/238 (42%), Gaps = 44/238 (18%)
Query: 19 RLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKHTRGHLVELMNSNNIL 78
+LGG +++ G GT+DG GQ+W+DL+ L R L ++
Sbjct: 135 QLGGEDVNVYGG------------GTLDGNGQVWYDLYAEDALI-LRPILFGVIGLKGGT 181
Query: 79 ISNLTFRNSPFWTIHPVYCRNVVIKGMTIL----APLNAPNTDGIDPDSSTNVCIEDCYI 134
I L R SP W +V+ G+ I + A NTDG D S N+ I++ I
Sbjct: 182 IGPLKLRYSPQWYQLVANSSDVIFDGIDISGYSSSKNEAKNTDGWDTYRSDNIVIQNSVI 241
Query: 135 ESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGG---IFNVTV 191
+GDD V+ K S+NI+V+ + VG + G + NV V
Sbjct: 242 NNGDDCVSFKPN-----------STNILVQNLHCNGSHGISVGSLGQYKGEVDIVQNVLV 290
Query: 192 DQLHVWDAAAGVRIKT-----------DKGRGGY--IENITIRNIKMERVKIPIRISR 236
+ +++A+ G RIK +G GG ++N+T + +E V I +++
Sbjct: 291 YNISMYNASDGARIKVWPGVSSAMSEDLQGGGGLGSVKNVTYNQMYIENVDWAIEVTQ 348
>sp|B0YDE8|PGLRX_ASPFC Probable exopolygalacturonase X OS=Neosartorya fumigata (strain
CEA10 / CBS 144.89 / FGSC A1163) GN=pgaX PE=3 SV=2
Length = 432
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 102/238 (42%), Gaps = 44/238 (18%)
Query: 19 RLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKHTRGHLVELMNSNNIL 78
+LGG +++ G GT+DG GQ+W+DL+ L R L ++
Sbjct: 135 QLGGEDVNVYGG------------GTLDGNGQVWYDLYAEDALI-LRPILFGVIGLKGGT 181
Query: 79 ISNLTFRNSPFWTIHPVYCRNVVIKGMTIL----APLNAPNTDGIDPDSSTNVCIEDCYI 134
I L R SP W +V+ G+ I + A NTDG D S N+ I++ I
Sbjct: 182 IGPLKLRYSPQWYQLVANSSDVIFDGIDISGYSSSKNEAKNTDGWDTYRSDNIVIQNSVI 241
Query: 135 ESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGG---IFNVTV 191
+GDD V+ K S+NI+V+ + VG + G + NV V
Sbjct: 242 NNGDDCVSFKPN-----------STNILVQNLHCNGSHGISVGSLGQYKGEVDIVQNVLV 290
Query: 192 DQLHVWDAAAGVRIKT-----------DKGRGGY--IENITIRNIKMERVKIPIRISR 236
+ +++A+ G RIK +G GG ++N+T + +E V I +++
Sbjct: 291 YNISMYNASDGARIKVWPGVSSAMSEDLQGGGGLGSVKNVTYNQMYIENVDWAIEVTQ 348
>sp|P26213|PGLR1_ASPNG Endopolygalacturonase I OS=Aspergillus niger GN=pgaI PE=1 SV=1
Length = 368
Score = 58.2 bits (139), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 88/220 (40%), Gaps = 39/220 (17%)
Query: 19 RLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKHTRGHLVELMNSNNIL 78
R GG+ +++ D IDG G WWD K T+ + + + +
Sbjct: 96 RFGGKDLTVTMAD----------GAVIDGDGSRWWDSKGTNGGK-TKPKFMYIHDVEDST 144
Query: 79 ISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLN----APNTDGIDPDSSTNVCIEDCYI 134
+ +N+P I V NV + TI NTDG D ST V I +
Sbjct: 145 FKGINIKNTPVQAI-SVQATNVHLNDFTIDNSDGDDNGGHNTDGFDISESTGVYISGATV 203
Query: 135 ESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSG-----VG-IGSEMSGGIFN 188
++ DD +A+ SG +S T TCSG +G +G + N
Sbjct: 204 KNQDDCIAINSG-----------------ESISFTGGTCSGGHGLSIGSVGGRDDNTVKN 246
Query: 189 VTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERV 228
VT+ V ++A GVRIKT G + IT NI++ +
Sbjct: 247 VTISDSTVSNSANGVRIKTIYKETGDVSEITYSNIQLSGI 286
>sp|A2QAH3|PGLR1_ASPNC Probable endopolygalacturonase I OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=pgaI PE=3 SV=1
Length = 368
Score = 58.2 bits (139), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 88/220 (40%), Gaps = 39/220 (17%)
Query: 19 RLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKHTRGHLVELMNSNNIL 78
R GG+ +++ D IDG G WWD K T+ + + + +
Sbjct: 96 RFGGKDLTVTMAD----------GAVIDGDGSRWWDSKGTNGGK-TKPKFMYIHDVEDST 144
Query: 79 ISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLN----APNTDGIDPDSSTNVCIEDCYI 134
+ +N+P I V NV + TI NTDG D ST V I +
Sbjct: 145 FKGINIKNTPVQAI-SVQATNVHLNDFTIDNSDGDDNGGHNTDGFDISESTGVYISGATV 203
Query: 135 ESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSG-----VG-IGSEMSGGIFN 188
++ DD +A+ SG +S T TCSG +G +G + N
Sbjct: 204 KNQDDCIAINSG-----------------ESISFTGGTCSGGHGLSIGSVGGRDDNTVKN 246
Query: 189 VTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERV 228
VT+ V ++A GVRIKT G + IT NI++ +
Sbjct: 247 VTISDSTVSNSANGVRIKTIYKETGDVSEITYSNIQLSGI 286
>sp|Q9P4W4|PGLRA_ASPNG Endopolygalacturonase A OS=Aspergillus niger GN=pgaA PE=1 SV=1
Length = 370
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 93/220 (42%), Gaps = 39/220 (17%)
Query: 19 RLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKHTRGHLVELMNSNNIL 78
R+ G+ I++ + +DG G WWD K T+ + ++
Sbjct: 96 RISGKDITVTQS----------SDAVLDGNGAKWWDGEGTNGGK-TKPKFFYAHDLDDSK 144
Query: 79 ISNLTFRNSPFWTIHPVYCRNVVIKGMTIL----APLNAPNTDGIDPDSSTNVCIEDCYI 134
IS L +N+P I V N+VI+ +TI NTDG D ST + I +
Sbjct: 145 ISGLYIKNTPVQAIS-VESDNLVIEDVTIDNSDGDSEGGHNTDGFDISESTYITITGATV 203
Query: 135 ESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSG-----VG-IGSEMSGGIFN 188
++ DD VA+ SG + Y SG TCSG +G +G + N
Sbjct: 204 KNQDDCVAINSGENIY---------------FSG--GTCSGGHGLSIGSVGGRDDNTVKN 246
Query: 189 VTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERV 228
VT V D+ GVRIKT G +E+IT NI++ +
Sbjct: 247 VTFIDSTVSDSENGVRIKTVYDATGTVEDITYSNIQLSGI 286
>sp|A2R8F8|PGLRA_ASPNC Probable endopolygalacturonase A OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=pgaA PE=3 SV=1
Length = 370
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 93/220 (42%), Gaps = 39/220 (17%)
Query: 19 RLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKHTRGHLVELMNSNNIL 78
R+ G+ I++ + +DG G WWD K T+ + ++
Sbjct: 96 RISGKDITVTQS----------SDAVLDGNGAKWWDGEGTNGGK-TKPKFFYAHDLDDSK 144
Query: 79 ISNLTFRNSPFWTIHPVYCRNVVIKGMTIL----APLNAPNTDGIDPDSSTNVCIEDCYI 134
IS L +N+P I V N+VI+ +TI NTDG D ST + I +
Sbjct: 145 ISGLYIKNTPVQAIS-VESDNLVIEDVTIDNSDGDSEGGHNTDGFDISESTYITITGATV 203
Query: 135 ESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSG-----VG-IGSEMSGGIFN 188
++ DD VA+ SG + Y SG TCSG +G +G + N
Sbjct: 204 KNQDDCVAINSGENIY---------------FSG--GTCSGGHGLSIGSVGGRDDNTVKN 246
Query: 189 VTVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERV 228
VT V D+ GVRIKT G +E+IT NI++ +
Sbjct: 247 VTFIDSTVSDSENGVRIKTVYDATGTVEDITYSNIQLSGI 286
>sp|Q4WQT2|PGLRA_ASPFU Probable endopolygalacturonase A OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=pgaA
PE=3 SV=1
Length = 368
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 91/219 (41%), Gaps = 37/219 (16%)
Query: 19 RLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKHTRGHLVELMNSNNIL 78
R GG+ I++ IDG+G WWD K T+ + + +
Sbjct: 96 RFGGKDITIKQNS----------GAVIDGEGSRWWDGEGTNGGK-TKPKFMYAHSLEDST 144
Query: 79 ISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLN----APNTDGIDPDSSTNVCIEDCYI 134
I+ L+ +N+P I V N+ + +TI NTDG D ST V I +
Sbjct: 145 ITGLSIKNTPVQAIS-VQATNLYLIDITIDNSDGDDNGGHNTDGFDISESTGVYIRGATV 203
Query: 135 ESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGG-----IFNV 189
++ DD +A+ SG + + GT G+ IGS GG + NV
Sbjct: 204 KNQDDCIAINSGEN--------------IEFSGGTCSGGHGLSIGS--VGGRDDNTVKNV 247
Query: 190 TVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERV 228
T+ V D+A GVRIKT G + +T NIK+ +
Sbjct: 248 TITDSTVTDSANGVRIKTVYDATGSVSQVTYSNIKLSGI 286
>sp|B0Y4Z4|PGLRA_ASPFC Probable endopolygalacturonase A OS=Neosartorya fumigata (strain
CEA10 / CBS 144.89 / FGSC A1163) GN=pgaA PE=3 SV=1
Length = 368
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 91/219 (41%), Gaps = 37/219 (16%)
Query: 19 RLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKHTRGHLVELMNSNNIL 78
R GG+ I++ IDG+G WWD K T+ + + +
Sbjct: 96 RFGGKDITIKQNS----------GAVIDGEGSRWWDGEGTNGGK-TKPKFMYAHSLEDST 144
Query: 79 ISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLN----APNTDGIDPDSSTNVCIEDCYI 134
I+ L+ +N+P I V N+ + +TI NTDG D ST V I +
Sbjct: 145 ITGLSIKNTPVQAIS-VQATNLYLIDITIDNSDGDDNGGHNTDGFDISESTGVYIRGATV 203
Query: 135 ESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGG-----IFNV 189
++ DD +A+ SG + + GT G+ IGS GG + NV
Sbjct: 204 KNQDDCIAINSGEN--------------IEFSGGTCSGGHGLSIGS--VGGRDDNTVKNV 247
Query: 190 TVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERV 228
T+ V D+A GVRIKT G + +T NIK+ +
Sbjct: 248 TITDSTVTDSANGVRIKTVYDATGSVSQVTYSNIKLSGI 286
>sp|Q05967|PGLR_TOBAC Polygalacturonase OS=Nicotiana tabacum GN=PG1 PE=2 SV=1
Length = 396
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 98/238 (41%), Gaps = 25/238 (10%)
Query: 43 GTIDGQGQMWWDLWWNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNVVI 102
G +DGQ W+ ++ +L + N I ++T +S + ++ C+N+
Sbjct: 119 GILDGQAAAAWECKQSKKCNKLPNNL-SFNSLTNSTIKDITTLDSKSFHVNVNQCKNLTF 177
Query: 103 KGMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARPSSNII 162
+ AP N+PNTDGI S++V I D +GDD ++V + +
Sbjct: 178 IRFNVSAPANSPNTDGIHVSRSSSVNITDSNFSTGDDCISV-----------GDETEQLY 226
Query: 163 VRRVSGTTPTCS-GVGIGSEMSGG------IFNVTVDQLHVWDAAAGVRIKT-DKGRGGY 214
+ RV TC G GI GG + V V + GVRIKT G
Sbjct: 227 ITRV-----TCGPGHGISVGSLGGNPDEKPVVGVFVRNCTFTNTDNGVRIKTWPASHPGV 281
Query: 215 IENITIRNIKMERVKIPIRISRGSNDHPDEGWDPKALPKIRGISFVNVVSVNTTKAPV 272
+ ++ +I ++ V P+ I + D + KI +SF N+ + T+ V
Sbjct: 282 VNDVHFEDIIVQNVSNPVVIDQVYCPFNKCNKDLPSQVKISKVSFQNIKGTSRTQDAV 339
>sp|A1CVV8|PGLRA_NEOFI Probable endopolygalacturonase A OS=Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=pgaA
PE=3 SV=1
Length = 368
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 91/219 (41%), Gaps = 37/219 (16%)
Query: 19 RLGGRHISLIHGDHLTNVIITGYNGTIDGQGQMWWDLWWNRTLKHTRGHLVELMNSNNIL 78
R GG+ I++ IDG+G WWD K T+ + + +
Sbjct: 96 RFGGKDITVKQN----------SGAVIDGEGSRWWDGEGTNGGK-TKPKFMYAHSLEDST 144
Query: 79 ISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLN----APNTDGIDPDSSTNVCIEDCYI 134
I+ L+ +N+P I V N+ + +TI NTDG D ST V I +
Sbjct: 145 ITGLSIKNTPVQAIS-VQATNLYLIDITIDNSDGDDNGGHNTDGFDISESTGVYIRGATV 203
Query: 135 ESGDDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTCSGVGIGSEMSGG-----IFNV 189
++ DD +A+ SG + + GT G+ IGS GG + NV
Sbjct: 204 KNQDDCIAINSGEN--------------IEFSGGTCSGGHGLSIGS--VGGRDDNTVKNV 247
Query: 190 TVDQLHVWDAAAGVRIKTDKGRGGYIENITIRNIKMERV 228
T+ V D+A GVRIKT G + +T NIK+ +
Sbjct: 248 TITDSTVTDSANGVRIKTVYDATGSVSEVTYSNIKLSGI 286
>sp|A1D7I1|PGXC_NEOFI Probable exopolygalacturonase C OS=Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=pgxC
PE=3 SV=1
Length = 440
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 90/209 (43%), Gaps = 24/209 (11%)
Query: 42 NGTIDGQGQMWWDLW-WNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTIHPVYCRNV 100
NG I+ GQ WWD N + R HL+ S I N R W + ++ ++
Sbjct: 134 NGWINSYGQAWWDANPANSSSFPNRPHLMSYKTSQ-ASIKNFRSRKPIAWNVK-LHGDDI 191
Query: 101 VIKGMTILAPLNAP---NTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDHYGIAMARP 157
+ + A NTDG D + TN+ I D + +GDD +AV + P
Sbjct: 192 TVTHAIVDAKSTGGFPFNTDGFDVEG-TNISITDSVMYNGDDAIAVNT-----------P 239
Query: 158 SSNIIVRRVSGTTPTCSGVGIGSEMS-----GGIFNVTVDQLHVWDAAAGVRIKTDKGRG 212
S NI+ R + G+ IGS I N+ + + V DA R K+ G
Sbjct: 240 SHNIVFAR-NTIGYQSHGMSIGSLGKDPTDFANITNLRFEDVTVIDALYAARFKSWSGGK 298
Query: 213 GYIENITIRNIKMERVKIPIRISRGSNDH 241
G ++N+ +NI++ V PI +++ +D
Sbjct: 299 GLVKNVVWKNIRVFNVTFPIFVTQSYSDQ 327
>sp|P26215|PGLR_COCCA Polygalacturonase OS=Cochliobolus carbonum GN=PGN1 PE=3 SV=1
Length = 364
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 100/242 (41%), Gaps = 31/242 (12%)
Query: 34 TNVIITGYNG-TIDGQGQMWWDLWWNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTI 92
TN+ + G +G TID GQ WWD + K T+ + IS L +N+P
Sbjct: 95 TNIKVVGASGHTIDAAGQKWWDGKGSNGGK-TKPKFFYAHSLTTSSISGLNIKNTPVQAF 153
Query: 93 HPVYCRNVVIKGMTI----LAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWD 148
+ + +TI A NTD D SS+ + I + I++ DD VA+ SG D
Sbjct: 154 SINGVTGLTLDRITIDNSAGDSAGAHNTDAFDIGSSSGITISNANIKNQDDCVAINSGSD 213
Query: 149 HYGIAMARPSSNIIVRRVSGTTPTCS---GVGIGS---EMSGGIFNVTVDQLHVWDAAAG 202
+ T CS GV IGS + V V + ++ G
Sbjct: 214 -----------------IHVTNCQCSGGHGVSIGSVGGRKDNTVKGVVVSGTTIANSDNG 256
Query: 203 VRIKTDKGRGGYIENITIRNIKMERV-KIPIRISRGSNDHPDEGWDPKALPKIRGISFVN 261
VRIKT G G + +IT NI ++ + K I I + + G +P I G++ N
Sbjct: 257 VRIKTISGATGSVSDITYENITLKNIAKYGIVIEQDYLNGGPTGKPTTGVP-ITGVTLKN 315
Query: 262 VV 263
V
Sbjct: 316 VA 317
>sp|Q9P4W2|PGLRD_ASPNG Endopolygalacturonase D OS=Aspergillus niger GN=pgaD PE=3 SV=1
Length = 495
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 108/256 (42%), Gaps = 52/256 (20%)
Query: 34 TNVIITGYNG-TIDGQGQMWWDLWWNRTLKHTRGHLVELMNSNNILISNLTFRNSPFWTI 92
T+V ITG G I+G G+ +WD + + H + + + N I NL N W +
Sbjct: 220 TDVTITGEEGHVINGNGEAYWDGEGSNGGQDKPDHFIVVKDMYNSKIENLNILN---WPV 276
Query: 93 HPVYCRN---VVIKGMTILAPLN------------APNTDGIDPDSSTNVCIEDCYIESG 137
H N + I G+ + A NTDG D S + + + ++ +
Sbjct: 277 HCFEIENTEYLTISGLILNNTAGDAANSKSDGDPAAHNTDGFDIKQSDFLTLSNSWVHNQ 336
Query: 138 DDLVAVKSGWDHYGIAMARPSSNIIVRRVSGTTPTC---SGVGIGSEMSGGIFNVTVDQL 194
DD VAV SG S+I+V + C G+ IGS GG N TVD +
Sbjct: 337 DDCVAVTSG------------SSIVVDNL-----YCYGGHGLSIGS--IGGKSNNTVDGV 377
Query: 195 -----HVWDAAAGVRIKTDKGRGGYIENITIRNIKMERVK-IPIRISRGSNDHPDEGW-- 246
V ++ G RIK++ G + N+ NI + + I I + D+ + G
Sbjct: 378 TFSNSQVINSENGCRIKSNADTTGEVYNVKYENITLSGISDYGIDIQQ---DYENGGATG 434
Query: 247 DPKALPKIRGISFVNV 262
DP KI ISFVNV
Sbjct: 435 DPTNGVKIENISFVNV 450
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.137 0.444
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 133,386,741
Number of Sequences: 539616
Number of extensions: 5835578
Number of successful extensions: 11348
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 99
Number of HSP's successfully gapped in prelim test: 60
Number of HSP's that attempted gapping in prelim test: 11017
Number of HSP's gapped (non-prelim): 178
length of query: 331
length of database: 191,569,459
effective HSP length: 118
effective length of query: 213
effective length of database: 127,894,771
effective search space: 27241586223
effective search space used: 27241586223
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)