BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020063
(331 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q90972|RNF13_CHICK E3 ubiquitin-protein ligase RNF13 OS=Gallus gallus GN=RNF13 PE=1
SV=1
Length = 381
Score = 89.0 bits (219), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 111/224 (49%), Gaps = 15/224 (6%)
Query: 104 FPDLPAKFAVDVNSSGTCGALHVADPADACSPLSNPVASNDADHINFVLIVRGQCIFEDK 163
F DLPA+F + + G G L + P +AC P++ P +++ VLI R +C F+ K
Sbjct: 48 FDDLPARFGYRLPAEGLKGFLINSKPENACEPIAPPPLRDNSSTAFIVLIRRLECNFDIK 107
Query: 164 IRNAQAAGYRAAIVYNDREKGSLVSMTASH----EGVKVHAIFVSLETGVYLKEHARGET 219
+ NAQ AGY+AAIV+N + L+SM ++ + + + ++F+ + LKE E
Sbjct: 108 VLNAQRAGYKAAIVHN-VDSDDLISMGSNDIEILKKIDIPSVFIGEASANSLKEEFTYEK 166
Query: 220 -GECCIFPESNRGSWSVLMVSVFSLIVVFALFAVAFITPRPWRPWPGQNQPLSRRLDSKV 278
G + PE + L+ + + + L + IT + +++ RL
Sbjct: 167 GGHVVLIPEFSLPLEYYLIPFLIIVGICLILIVIFMIT----KFVQDRHRARRNRLRKDQ 222
Query: 279 VEALPCFLFSSASSSQCHGGETCAICLEDYQDGEKLKVLSCKHG 322
++ LP F + CAICL++Y+DG+KL++L C H
Sbjct: 223 LKKLPVHKFKKGDEY-----DVCAICLDEYEDGDKLRILPCSHA 261
>sp|Q0VD51|RNF13_BOVIN E3 ubiquitin-protein ligase RNF13 OS=Bos taurus GN=RNF13 PE=2 SV=1
Length = 380
Score = 89.0 bits (219), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 107/226 (47%), Gaps = 13/226 (5%)
Query: 101 SLHFPDLPAKFAVDVNSSGTCGALHVADPADACSPLSNPVASNDADHINFVLIVRGQCIF 160
S F DLPA+F + + G G L + P +AC P+ P +++ VLI R C F
Sbjct: 45 SQTFDDLPARFGYRLPAEGLKGFLINSKPENACEPIVPPPVRDNSSGTFIVLIRRLDCNF 104
Query: 161 EDKIRNAQAAGYRAAIVYNDREKGSLVSMTASH----EGVKVHAIFVSLETGVYLKEHAR 216
++K+ NAQ AGY+AAIV+N + L+SM ++ + + + ++F+ + LK+
Sbjct: 105 DEKVLNAQRAGYKAAIVHN-VDSDDLISMGSNDIEVLKKIDIPSVFIGESSANSLKDEFT 163
Query: 217 GETGECCIFPESNRGSWSVLMVSVFSLIVVFALFAVAFITPRPWRPWPGQNQPLSRRLDS 276
E G I ++ ++ + + V F+ + + + R+
Sbjct: 164 YEKGGHIILVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRK--- 220
Query: 277 KVVEALPCFLFSSASSSQCHGGETCAICLEDYQDGEKLKVLSCKHG 322
++ LP F + CAICL++Y+DG+KL++L C H
Sbjct: 221 DQLKKLPVHKFKKGDEY-----DVCAICLDEYEDGDKLRILPCSHA 261
>sp|O54965|RNF13_MOUSE E3 ubiquitin-protein ligase RNF13 OS=Mus musculus GN=Rnf13 PE=1
SV=2
Length = 381
Score = 88.2 bits (217), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 105/223 (47%), Gaps = 13/223 (5%)
Query: 104 FPDLPAKFAVDVNSSGTCGALHVADPADACSPLSNPVASNDADHINFVLIVRGQCIFEDK 163
F DLPA+F + + G G L + P +AC P+ P +++ VLI R C F+ K
Sbjct: 48 FEDLPARFGYRLPAEGLKGFLINSKPENACEPIVPPPLKDNSSGTFIVLIRRLDCNFDIK 107
Query: 164 IRNAQAAGYRAAIVYNDREKGSLVSMTASH----EGVKVHAIFVSLETGVYLKEHARGET 219
+ NAQ AGY+AAIV+N + L+SM ++ + + + ++F+ + LK+ E
Sbjct: 108 VLNAQRAGYKAAIVHN-VDSDDLISMGSNDIDTLKKIDIPSVFIGESSANSLKDEFTYEK 166
Query: 220 GECCIFPESNRGSWSVLMVSVFSLIVVFALFAVAFITPRPWRPWPGQNQPLSRRLDSKVV 279
G I ++ ++ + + V F+ + + + R+ +
Sbjct: 167 GGHIILVPELSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRNRRNRLRK---DQL 223
Query: 280 EALPCFLFSSASSSQCHGGETCAICLEDYQDGEKLKVLSCKHG 322
+ LP F + CAICLE+Y+DG+KL++L C H
Sbjct: 224 KKLPVHKFKKGDEY-----DVCAICLEEYEDGDKLRILPCSHA 261
>sp|Q66HG0|RNF13_RAT E3 ubiquitin-protein ligase RNF13 OS=Rattus norvegicus GN=Rnf13
PE=2 SV=1
Length = 380
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 105/223 (47%), Gaps = 13/223 (5%)
Query: 104 FPDLPAKFAVDVNSSGTCGALHVADPADACSPLSNPVASNDADHINFVLIVRGQCIFEDK 163
F DLPA+F + + G G L + P +AC P+ P +++ VLI R C F+ K
Sbjct: 48 FEDLPARFGYRLPAEGLKGFLINSKPENACEPIVPPPLKDNSSGTFIVLIRRLDCNFDIK 107
Query: 164 IRNAQAAGYRAAIVYNDREKGSLVSMTASH----EGVKVHAIFVSLETGVYLKEHARGET 219
+ NAQ AGY+AAIV+N + L+SM ++ + + + ++F+ + LK+ E
Sbjct: 108 VLNAQRAGYKAAIVHN-VDSDDLISMGSNDIDILKKIDIPSVFIGESSANSLKDEFTYEK 166
Query: 220 GECCIFPESNRGSWSVLMVSVFSLIVVFALFAVAFITPRPWRPWPGQNQPLSRRLDSKVV 279
G I ++ ++ + + V F+ + + + R+ +
Sbjct: 167 GGHVILVPELSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRNRRNRLRK---DQL 223
Query: 280 EALPCFLFSSASSSQCHGGETCAICLEDYQDGEKLKVLSCKHG 322
+ LP F + CAICLE+Y+DG+KL++L C H
Sbjct: 224 KKLPVHKFKKGDEY-----DVCAICLEEYEDGDKLRILPCSHA 261
>sp|Q91XF4|RN167_MOUSE E3 ubiquitin-protein ligase RNF167 OS=Mus musculus GN=Rnf167 PE=2
SV=1
Length = 347
Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 107/228 (46%), Gaps = 17/228 (7%)
Query: 101 SLHFPDLPAKFAVDVNSSGTCGALHVADPADACSPLSNPVASNDADHINFVLIVRGQCIF 160
S+ F DLPA F ++ G G L A P +AC P++ P ++ + L+ R C F
Sbjct: 35 SMDFADLPALFGATLSDEGLQGFLVEAHPENACGPIAPPPSAPVNGSVFIALLRRFDCNF 94
Query: 161 EDKIRNAQAAGYRAAIVYNDREKGSLVSMTASHEGVK----VHAIFVSLETGVYLKEHAR 216
+ K+ NAQ AGY AA+V+N L++M + E ++ + ++F+ + YL+
Sbjct: 95 DLKVLNAQKAGYGAAVVHN-VNSNELLNMVWNSEEIQQQIWIPSVFIGERSAEYLRALFV 153
Query: 217 GETGECCIFPESNRGSWSVLMVSVFSLI--VVFALFAVAFITPRPWRPWPGQNQPLSRRL 274
E G + N ++ ++ +V A+ V + R +N RL
Sbjct: 154 YEKGARVLLVPDNSFPLGYYLIPFTGIVGLLVLAMGTVLIVRCIQHRKRLQRN-----RL 208
Query: 275 DSKVVEALPCFLFSSASSSQCHGGETCAICLEDYQDGEKLKVLSCKHG 322
+ ++ +P + + CAICL++Y+DG+KL+VL C H
Sbjct: 209 TKEQLKQIPTHDYQKGDEY-----DVCAICLDEYEDGDKLRVLPCAHA 251
>sp|Q5RCV8|RNF13_PONAB E3 ubiquitin-protein ligase RNF13 OS=Pongo abelii GN=RNF13 PE=2
SV=1
Length = 381
Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 106/226 (46%), Gaps = 13/226 (5%)
Query: 101 SLHFPDLPAKFAVDVNSSGTCGALHVADPADACSPLSNPVASNDADHINFVLIVRGQCIF 160
S F DLPA+F + + G G L + P +AC P+ P +++ VLI R C F
Sbjct: 45 SQTFDDLPARFGYRLPAEGLKGFLINSKPENACEPIVPPPVKDNSSGTFIVLIRRLDCNF 104
Query: 161 EDKIRNAQAAGYRAAIVYNDREKGSLVSMTASH----EGVKVHAIFVSLETGVYLKEHAR 216
+ K+ NAQ AGY+AAIV+N + L+SM ++ + + + ++F+ + LK+
Sbjct: 105 DIKVLNAQRAGYKAAIVHN-VDSDDLISMGSNDIEVLKKIDIPSVFIGESSANSLKDEFT 163
Query: 217 GETGECCIFPESNRGSWSVLMVSVFSLIVVFALFAVAFITPRPWRPWPGQNQPLSRRLDS 276
E G I ++ ++ + + V F+ + + + R+
Sbjct: 164 YEKGGHLILVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRK--- 220
Query: 277 KVVEALPCFLFSSASSSQCHGGETCAICLEDYQDGEKLKVLSCKHG 322
++ LP F + CAICL++Y+DG+KL++L C H
Sbjct: 221 DQLKKLPVHKFKKGDEY-----DVCAICLDEYEDGDKLRILPCSHA 261
>sp|O43567|RNF13_HUMAN E3 ubiquitin-protein ligase RNF13 OS=Homo sapiens GN=RNF13 PE=1
SV=1
Length = 381
Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 106/226 (46%), Gaps = 13/226 (5%)
Query: 101 SLHFPDLPAKFAVDVNSSGTCGALHVADPADACSPLSNPVASNDADHINFVLIVRGQCIF 160
S F DLPA+F + + G G L + P +AC P+ P +++ VLI R C F
Sbjct: 45 SQTFDDLPARFGYRLPAEGLKGFLINSKPENACEPIVPPPVKDNSSGTFIVLIRRLDCNF 104
Query: 161 EDKIRNAQAAGYRAAIVYNDREKGSLVSMTASH----EGVKVHAIFVSLETGVYLKEHAR 216
+ K+ NAQ AGY+AAIV+N + L+SM ++ + + + ++F+ + LK+
Sbjct: 105 DIKVLNAQRAGYKAAIVHN-VDSDDLISMGSNDIEVLKKIDIPSVFIGESSANSLKDEFT 163
Query: 217 GETGECCIFPESNRGSWSVLMVSVFSLIVVFALFAVAFITPRPWRPWPGQNQPLSRRLDS 276
E G I ++ ++ + + V F+ + + + R+
Sbjct: 164 YEKGGHLILVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRK--- 220
Query: 277 KVVEALPCFLFSSASSSQCHGGETCAICLEDYQDGEKLKVLSCKHG 322
++ LP F + CAICL++Y+DG+KL++L C H
Sbjct: 221 DQLKKLPVHKFKKGDEY-----DVCAICLDEYEDGDKLRILPCSHA 261
>sp|Q9H6Y7|RN167_HUMAN E3 ubiquitin-protein ligase RNF167 OS=Homo sapiens GN=RNF167 PE=1
SV=1
Length = 350
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 107/227 (47%), Gaps = 15/227 (6%)
Query: 101 SLHFPDLPAKFAVDVNSSGTCGALHVADPADACSPLSNPVASNDADHINFVLIVRGQCIF 160
S+ F DLPA F ++ G G L A P +ACSP++ P + + L+ R C F
Sbjct: 35 SMDFADLPALFGATLSQEGLQGFLVEAHPDNACSPIAPPPPAPVNGSVFIALLRRFDCNF 94
Query: 161 EDKIRNAQAAGYRAAIVYNDREKGSLVSMTASHEGVK----VHAIFVSLETGVYLKEHAR 216
+ K+ NAQ AGY AA+V+N L++M + E ++ + ++F+ + YL+
Sbjct: 95 DLKVLNAQKAGYGAAVVHN-VNSNELLNMVWNSEEIQQQIWIPSVFIGERSSEYLRALFV 153
Query: 217 GETGECCIFPESNRGSWSVLMVSVFSLIVVFALFAVAFITPRPWRPWPGQNQPLSR-RLD 275
E G + N ++ ++ + L A + R + + L R RL
Sbjct: 154 YEKGARVLLVPDNTFPLGYYLIPFTGIVGLLVLAMGAVMIARCIQ----HRKRLQRNRLT 209
Query: 276 SKVVEALPCFLFSSASSSQCHGGETCAICLEDYQDGEKLKVLSCKHG 322
+ ++ +P + + CAICL++Y+DG+KL+VL C H
Sbjct: 210 KEQLKQIPTHDYQKGDQY-----DVCAICLDEYEDGDKLRVLPCAHA 251
>sp|Q5XIL0|RN167_RAT E3 ubiquitin-protein ligase RNF167 OS=Rattus norvegicus GN=Rnf167
PE=2 SV=1
Length = 349
Score = 78.6 bits (192), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 108/228 (47%), Gaps = 17/228 (7%)
Query: 101 SLHFPDLPAKFAVDVNSSGTCGALHVADPADACSPLSNPVASNDADHINFVLIVRGQCIF 160
S+ F DLPA F ++ G G L A P +ACSP++ P ++ + L+ R C F
Sbjct: 35 SMDFADLPALFGATLSDEGLQGFLVEAHPENACSPIAPPPSAPVNGSVFIALLRRFDCNF 94
Query: 161 EDKIRNAQAAGYRAAIVYNDREKGSLVSMTASHEGVK----VHAIFVSLETGVYLKEHAR 216
+ K+ NAQ AGY AA+V+N L++M + E ++ + ++F+ + YL+
Sbjct: 95 DLKVLNAQKAGYGAAVVHN-VNSNELLNMVWNSEEIQQQIWIPSVFIGERSAEYLRALFV 153
Query: 217 GETGECCIFPESNRGSWSVLMVSVFSLI--VVFALFAVAFITPRPWRPWPGQNQPLSRRL 274
E G + N ++ ++ +V A+ V + R +N RL
Sbjct: 154 YEKGARVLLVPDNSFPLGYYLIPFTGIVGLLVLAMGTVLIVRCIQHRKRLQRN-----RL 208
Query: 275 DSKVVEALPCFLFSSASSSQCHGGETCAICLEDYQDGEKLKVLSCKHG 322
+ ++ +P + + CAICL++Y+DG+KL++L C H
Sbjct: 209 TKEQLKQIPTHDYQKGDEY-----DVCAICLDEYEDGDKLRILPCAHA 251
>sp|Q8WWF5|ZNRF4_HUMAN Zinc/RING finger protein 4 OS=Homo sapiens GN=ZNRF4 PE=2 SV=3
Length = 429
Score = 78.6 bits (192), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 105/230 (45%), Gaps = 19/230 (8%)
Query: 101 SLHFPDLPAKFAVDVNSSGTCGALHVADPADACSPLSNPVASNDADHINFVLIVRGQCIF 160
S+ F DLPA F V + G G L PA+AC P+ P N + VLI R C F
Sbjct: 110 SVDFADLPALFGVPLAPEGIRGYLMEVKPANACHPIEAPRLGNRSLG-AIVLIRRYDCTF 168
Query: 161 EDKIRNAQAAGYRAAIVYNDREKGSLVSMTASHEGVK----VHAIFVSLETGVYLKE-HA 215
+ K+ NAQ AG+ AAIV+N LVSMT +E ++ + ++FVS L+
Sbjct: 169 DLKVLNAQRAGFEAAIVHN-VHSDDLVSMTHVYEDLRGQIAIPSVFVSEAASQDLRVILG 227
Query: 216 RGETGECCIFPES----NRGSWSVLMVSVFSLIVVFALFAVAFITPRPWRPWPGQNQPLS 271
++ + P+ + G VL VS + L AL AF W
Sbjct: 228 CNKSAHALLLPDDPPCHDLGCHPVLTVS-WVLGCTLALVVSAFFVLNHLWLWAQACCSHR 286
Query: 272 RRLDSKVVEALPCFLFSSASSSQCHGGETCAICLEDYQDGEKLKVLSCKH 321
R + + + F+ + CAICL++Y++G++LK+L C H
Sbjct: 287 RPVKTSTCQKAQVRTFT-------WHNDLCAICLDEYEEGDQLKILPCSH 329
>sp|Q4R6Y5|ZNRF4_MACFA Zinc/RING finger protein 4 OS=Macaca fascicularis GN=ZNRF4 PE=2
SV=1
Length = 429
Score = 74.7 bits (182), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 103/231 (44%), Gaps = 21/231 (9%)
Query: 101 SLHFPDLPAKFAVDVNSSGTCGALHVADPADACSPLSNPVASNDADHINFVLIVRGQCIF 160
S+ F DLPA F V + G G L PA+AC P+ P N + LI R C F
Sbjct: 110 SVDFADLPALFGVPLAPEGIRGYLMEVKPANACHPVEAPRLGNRSLG-AIALIRRYDCTF 168
Query: 161 EDKIRNAQAAGYRAAIVYNDREKGSLVSMTASHEGVKVHAIFVSLETGVYLKEHAR---- 216
+ K+ NAQ AG+ AAIV+N LVSMT E ++ S+ G + R
Sbjct: 169 DLKVLNAQRAGFEAAIVHN-VHSDDLVSMTHVSEDLRGQIAIPSVFVGEAASQDLRVILG 227
Query: 217 -GETGECCIFPES----NRGSWSVLMVSVFSLIVVFAL-FAVAFITPRPWRPWPGQNQPL 270
++ + P+ + VL VS ++L AL + F+ R W W
Sbjct: 228 CDKSAHVLLLPDDPPCRDLDCHPVLTVS-WALGRTLALVVSTLFVLNRLWL-WAQACCSH 285
Query: 271 SRRLDSKVVEALPCFLFSSASSSQCHGGETCAICLEDYQDGEKLKVLSCKH 321
R + + + F+ + CAICL++Y++G++LK+L C H
Sbjct: 286 RRLVKTSTCQKAQVRTFT-------RRNDLCAICLDEYEEGDQLKILPCSH 329
>sp|Q8AWW4|RN128_XENLA E3 ubiquitin-protein ligase RNF128 OS=Xenopus laevis GN=rnf128 PE=2
SV=2
Length = 404
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 93/209 (44%), Gaps = 25/209 (11%)
Query: 135 PLSNPVASNDADHINF-----------VLIVRGQ-CIFEDKIRNAQAAGYRAAIVYNDRE 182
P S + + D++NF LI RG C F +KI A G RA +VYN+
Sbjct: 75 PKSEKLYTACKDNVNFSVPSGWTGPWIALIQRGGGCTFTEKINRAAERGARAVVVYNNGI 134
Query: 183 KGSLVSMTASHEGVK-VHAIFVSLETGVYLKEHARGETGECCIFPESNR-GSW----SVL 236
+ M SH G K AI + G + + +G + + GSW S+
Sbjct: 135 DNEVFEM--SHPGTKDTVAIMIGNLKGNEIVDLIKGGMQVTMVIEVGRKHGSWINHYSIF 192
Query: 237 MVSVFSLIVVFALFA-VAFITPRPWRPWPGQNQPLSRRLDSKVVEALPCF-LFSSASSSQ 294
VSV IV A F + R WR QN+ +RL ++ +A+ L + +
Sbjct: 193 FVSVSFFIVTAATVGYFIFYSARRWRLTRAQNKK-QKRLKAEAKKAIGKLQLRTIKQGDK 251
Query: 295 CHG--GETCAICLEDYQDGEKLKVLSCKH 321
G G++CA+C+E Y+ + +++L+C H
Sbjct: 252 VLGPDGDSCAVCIEPYKPSDVVRILTCNH 280
>sp|Q8N7C7|RN148_HUMAN RING finger protein 148 OS=Homo sapiens GN=RNF148 PE=2 SV=2
Length = 305
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 78/198 (39%), Gaps = 10/198 (5%)
Query: 131 DACSPLSNPVASNDADHINFVLIVRGQCIFEDKIRNAQAAGYRAAIVYNDREKGSLVSMT 190
+AC PL+N AD LI RG C F KI A G I+YN + GS V
Sbjct: 84 NACHPLTNFSRPKQADSW-LALIERGGCTFTHKINVAAEKGANGVIIYNYQGTGSKV-FP 141
Query: 191 ASHEGVK-VHAIFVSLETGVYLKEHARGETGECCIFPESNRGSWSVLMVSVFSLIVVFAL 249
SH+G + + A+ +S G+ + H+ + + E R + + L A
Sbjct: 142 MSHQGTENIVAVMISNLKGMEIL-HSIQKGVYVTVIIEVGRMHMQWVSHYIMYLFTFLAA 200
Query: 250 FAVAFITPRPWRPWPGQNQPLSRRLDS------KVVEALPCFLFSSASSSQCHGGETCAI 303
F WR P +RR K ++ L + + C +
Sbjct: 201 TIAYFYLDCVWRLTPRVPNSFTRRRSQIKTDVKKAIDQLQLRVLKEGDEELDLNEDNCVV 260
Query: 304 CLEDYQDGEKLKVLSCKH 321
C + Y+ + +++L+CKH
Sbjct: 261 CFDTYKPQDVVRILTCKH 278
>sp|Q06003|GOLI_DROME Protein goliath OS=Drosophila melanogaster GN=gol PE=2 SV=3
Length = 461
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 87/206 (42%), Gaps = 19/206 (9%)
Query: 132 ACSP-----LSNPVASNDADHINFVLIVRGQCIFEDKIRNAQAAGYRAAIVYNDREKGSL 186
AC+P L P+ D L+ RG+C FE+K+++ I+YND++ L
Sbjct: 121 ACTPYIRGTLGAPIP--DKGETWIALVRRGRCTFEEKVKHVYQQNAAGVIIYNDKQVMQL 178
Query: 187 VSMTASHEGVKVHAIFVSLETGVYLKEHARGETGECCIFPESNRG--------SWSVLMV 238
M + + A+ G L E RG SVL V
Sbjct: 179 EKMQIKGKTRNIAAVITYQNIGQDLSLTLDKGYNVTISIIEGRRGVRTISSLNRTSVLFV 238
Query: 239 SV-FSLIVVFALFAVAFITPRPWRPWPGQNQPLSRRLDSKVVEALPCFLFSSA--SSSQC 295
S+ F ++++ +L + F + +R ++Q SR L S +A+ + S +
Sbjct: 239 SISFIVLMIISLVWLIFYYIQRFRYMQAKDQQ-SRNLCSVTKKAIMKIPTKTGKFSDEKD 297
Query: 296 HGGETCAICLEDYQDGEKLKVLSCKH 321
+ CAIC+E Y+ + +++L CKH
Sbjct: 298 LDSDCCAICIEAYKPTDTIRILPCKH 323
>sp|Q6NRX0|RN149_XENLA E3 ubiquitin-protein ligase RNF149 OS=Xenopus laevis GN=rnf149 PE=2
SV=1
Length = 397
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 79/182 (43%), Gaps = 12/182 (6%)
Query: 150 FVLIVRGQCIFEDKIRNAQAAGYRAAIVYNDREKGSLVSMTASHEGV-KVHAIFVSLETG 208
L+ RG C F++K+ NA G A ++YN+ + G+ +++ SH G I VS G
Sbjct: 105 IALVARGGCTFKEKVFNAANRGASAVVIYNEAKSGN-ATVSMSHLGTGNTVVIMVSYPKG 163
Query: 209 VYLKEHARGETGECCIFPESNR-------GSWSVLMVSVFSLIVVFALFAVAFITPRPWR 261
+ + E R + + R G V + F +++ +L + F + +
Sbjct: 164 MEIMEPLRRDIPVKMVITVGTRHVQEFISGQSVVFVAIAFITMMIISLAWLIFYYIQRFL 223
Query: 262 PWPGQ--NQPLSRRLDSKVVEALPCFLFSSASSSQCHGGETCAICLEDYQDGEKLKVLSC 319
Q NQ +R+ K + L E CA+C+E+Y+ + +++L C
Sbjct: 224 YTGAQCGNQS-NRKETKKAISQLQLHRVKKGEKGIDIDAENCAVCIENYKTKDLVRILPC 282
Query: 320 KH 321
KH
Sbjct: 283 KH 284
>sp|Q6Y290|GOLI_RAT E3 ubiquitin-protein ligase RNF130 OS=Rattus norvegicus GN=Rnf130
PE=1 SV=1
Length = 419
Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 76/183 (41%), Gaps = 14/183 (7%)
Query: 150 FVLIVRGQCIFEDKIRNAQAAGYRAAIVYNDREKGSLVSMTASHEGVKVHAIFVSLETGV 209
L+ RG C F++KI A A ++YN++ K V+MT G + + L
Sbjct: 105 IALLQRGNCTFKEKISRAAFHNAVAVVIYNNKSKEEPVTMTHPGTGDIIAVMITELRGKD 164
Query: 210 YLKEHARGETGECCI-----FPESN--RGSWSVLMVSVFSLIVVFALFAV-AFITPRPWR 261
L + + + I P N RGS + +S L+++ + + + FI +
Sbjct: 165 ILSYLEKNISVQMTIAVGTRMPPKNFSRGSLVFVSISFIVLMIISSAWLIFYFIQKIRYT 224
Query: 262 PWPGQNQPLSRRLDS---KVVEALPCFLFSSASSSQCHGGETCAICLEDYQDGEKLKVLS 318
+NQ RRL K + L + CA+C+E Y+ + ++VL
Sbjct: 225 NARDRNQ---RRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRVLP 281
Query: 319 CKH 321
CKH
Sbjct: 282 CKH 284
>sp|Q8VEM1|GOLI_MOUSE E3 ubiquitin-protein ligase RNF130 OS=Mus musculus GN=Rnf130 PE=2
SV=1
Length = 419
Score = 55.1 bits (131), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 76/183 (41%), Gaps = 14/183 (7%)
Query: 150 FVLIVRGQCIFEDKIRNAQAAGYRAAIVYNDREKGSLVSMTASHEGVKVHAIFVSLETGV 209
L+ RG C F++KI A A ++YN++ K V+MT G + + L
Sbjct: 105 IALLQRGNCTFKEKISRAAFHNAVAVVIYNNKSKEEPVTMTHPGTGDIIAVMITELRGKD 164
Query: 210 YLKEHARGETGECCI-----FPESN--RGSWSVLMVSVFSLIVVFALFAV-AFITPRPWR 261
L + + + I P N RGS + +S L+++ + + + FI +
Sbjct: 165 ILSYLEKNISVQMTIAVGTRMPPKNFSRGSLVFVSISFIVLMIISSAWLIFYFIQKIRYT 224
Query: 262 PWPGQNQPLSRRLDS---KVVEALPCFLFSSASSSQCHGGETCAICLEDYQDGEKLKVLS 318
+NQ RRL K + L + CA+C+E Y+ + ++VL
Sbjct: 225 NARDRNQ---RRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRVLP 281
Query: 319 CKH 321
CKH
Sbjct: 282 CKH 284
>sp|Q3U2C5|RN149_MOUSE E3 ubiquitin-protein ligase RNF149 OS=Mus musculus GN=Rnf149 PE=2
SV=3
Length = 394
Score = 55.1 bits (131), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 91/219 (41%), Gaps = 21/219 (9%)
Query: 118 SGTCGALHVADPADACSPLSNPVASNDADHINFV-LIVRGQCIFEDKIRNAQAAGYRAAI 176
G G PA+ C+P + VA + +V L+ RG C F+DK+ A A +
Sbjct: 73 QGLVGVPRAPAPAEGCAPDTRFVAPGALGNAPWVALVARGGCTFKDKVLAAARRNASAVV 132
Query: 177 VYNDREKGSLVSMTASHEGV-----------KVHAIFVSLETGVYLKEHARGETGECCIF 225
VYN G+ + SH G K IF ++ G+ +K R E G +
Sbjct: 133 VYNLESNGN-ATEPMSHAGTGNIVVIMISYPKGREIFDLVQKGIPVK--MRIEIGTRHMQ 189
Query: 226 PESNRGSWSVLMVSVFSLIVVFALFAVAFITPR---PWRPWPGQNQPLSRRLDSKVVEAL 282
+ S + ++ +++++ + + + R + QN R+ KV+ L
Sbjct: 190 EFISGQSVVFVAIAFITMMIISLAWLIFYYIQRFLYTGSQFGSQNH---RKETKKVIGQL 246
Query: 283 PCFLFSSASSSQCHGGETCAICLEDYQDGEKLKVLSCKH 321
P E CA+C+E+++ + +++L CKH
Sbjct: 247 PLHTVKHGEKGIDVDAENCAVCIENFKVKDVIRILPCKH 285
>sp|G3X9R7|RN148_MOUSE RING finger protein 148 OS=Mus musculus GN=Rnf148 PE=2 SV=1
Length = 316
Score = 54.7 bits (130), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 79/196 (40%), Gaps = 8/196 (4%)
Query: 131 DACSPLSNPVASNDADHINFVLIVRGQCIFEDKIRNAQAAGYRAAIVYNDREKGSLVSMT 190
+ACSPL+N + D LI RG C F KI A G I+YN G+ V
Sbjct: 97 NACSPLTN-FSRPDQTDTWLALIERGGCTFTHKINLAAEKGANGVIIYNYPGTGNKV-FP 154
Query: 191 ASHEGVK-VHAIFVSLETGVYLKEHARGETGECCIFPESNRGSWSVLMVSVFSLIVVFAL 249
SH+G + + A+ + G+ L H + I E R L V SL A
Sbjct: 155 MSHQGTENIVAVMIGNLKGMELL-HLIQQGVYVTIIIEVGRMHMPWLSHYVMSLFTFLAA 213
Query: 250 FAVAFITPRPWRPWPGQNQPL-SRRLDSKVVEA---LPCFLFSSASSSQCHGGETCAICL 305
WRP + R+L + V +A L + ++C +C
Sbjct: 214 TVTYLFLYCAWRPRVSNSSTRRQRQLKADVKKAIGQLQLRVLQDGDKELDPNEDSCVVCF 273
Query: 306 EDYQDGEKLKVLSCKH 321
+ Y+ + +++L+CKH
Sbjct: 274 DMYKAQDVIRILTCKH 289
>sp|Q86XS8|GOLI_HUMAN E3 ubiquitin-protein ligase RNF130 OS=Homo sapiens GN=RNF130 PE=1
SV=1
Length = 419
Score = 54.7 bits (130), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 76/183 (41%), Gaps = 14/183 (7%)
Query: 150 FVLIVRGQCIFEDKIRNAQAAGYRAAIVYNDREKGSLVSMTASHEGVKVHAIFVSLETGV 209
L+ RG C F++KI A A ++YN++ K V+MT G + + L
Sbjct: 105 IALLQRGNCTFKEKISRAAFHNAVAVVIYNNKSKEEPVTMTHPGTGDIIAVMITELRGKD 164
Query: 210 YLKEHARGETGECCI-----FPESN--RGSWSVLMVSVFSLIVVFALFAV-AFITPRPWR 261
L + + + I P N RGS + +S L+++ + + + FI +
Sbjct: 165 ILSYLEKNISVQMTIAVGTRMPPKNFSRGSLVFVSISFIVLMIISSAWLIFYFIQKIRYT 224
Query: 262 PWPGQNQPLSRRLDS---KVVEALPCFLFSSASSSQCHGGETCAICLEDYQDGEKLKVLS 318
+NQ RRL K + L + CA+C+E Y+ + +++L
Sbjct: 225 NARDRNQ---RRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILP 281
Query: 319 CKH 321
CKH
Sbjct: 282 CKH 284
>sp|Q9BZQ6|EDEM3_HUMAN ER degradation-enhancing alpha-mannosidase-like protein 3 OS=Homo
sapiens GN=EDEM3 PE=1 SV=2
Length = 932
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 108 PAKFAVDVNS-SGTCGALHVADPADACSPLSNPVASNDADHINFVLIVRGQCIFEDKIRN 166
PA+F +D++ T G + + P++ CS L+NP +A LI RGQC+F +K RN
Sbjct: 667 PAQFGLDLSKHKETRGFVASSKPSNGCSELTNP----EAVMGKIALIQRGQCMFAEKARN 722
Query: 167 AQAAGYRAAIVYNDREKGS 185
Q AG IV +D E S
Sbjct: 723 IQNAGAIGGIVIDDNEGSS 741
>sp|Q566M8|RN150_DANRE RING finger protein 150 OS=Danio rerio GN=rnf150 PE=2 SV=1
Length = 419
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 82/184 (44%), Gaps = 14/184 (7%)
Query: 150 FVLIVRGQCIFEDKIRNAQAAGYRAAIVYNDREKGSLVSMTASHEGV-KVHAIFVSLETG 208
LI RG C ++DKIR+A A +++N ++T H+G+ V AI + G
Sbjct: 106 IALISRGNCTYKDKIRHAVGHNASAVVIFNVGSSNPNETITMPHQGISDVVAIMIPEPKG 165
Query: 209 ---VYLKE-----HARGETGECCIFPESNRGSWSVLMVSV-FSLIVVFALFAVAFITPRP 259
V L E H G + +R SV+ VS+ F ++++ +L + F +
Sbjct: 166 RELVLLMERNITVHMHITIGTRNLQKYVSR--TSVVFVSISFIILMIISLAWLVFYYIQR 223
Query: 260 WRPWPGQNQPLSRRLDS--KVVEALPCFLFSSASSSQCHGGETCAICLEDYQDGEKLKVL 317
+R +++ R D+ K + L + CA+C+E Y+ + +++L
Sbjct: 224 FRYANARDRNQRRLGDAAKKAISQLQVRTIRKGDQETESDFDNCAVCIEGYKPNDVVRIL 283
Query: 318 SCKH 321
C+H
Sbjct: 284 PCRH 287
>sp|Q2HXL6|EDEM3_MOUSE ER degradation-enhancing alpha-mannosidase-like protein 3 OS=Mus
musculus GN=Edem3 PE=1 SV=2
Length = 931
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 108 PAKFAVDVNS-SGTCGALHVADPADACSPLSNPVASNDADHINFVLIVRGQCIFEDKIRN 166
PA+F +D++ T G + + P + CS L+NP +A LI RGQC+F +K RN
Sbjct: 668 PAQFGLDLSKHKETRGFVASSKPYNGCSELTNP----EAVMGKIALIQRGQCMFAEKARN 723
Query: 167 AQAAGYRAAIVYNDREKGS 185
Q AG IV +D E S
Sbjct: 724 IQNAGAIGGIVIDDNEGSS 742
>sp|Q9D304|RN128_MOUSE E3 ubiquitin-protein ligase RNF128 OS=Mus musculus GN=Rnf128 PE=1
SV=1
Length = 428
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 88/205 (42%), Gaps = 15/205 (7%)
Query: 131 DACSPLSN---PVASNDADHINFVLIVR--GQCIFEDKIRNAQAAGYRAAIVYN-DREKG 184
+AC+P +N P ++++ +++ G C F DKI A G A+++N +
Sbjct: 94 NACNPHTNFTVPTVWGSTVQVSWLALIQRGGGCTFADKIHLASERGASGAVIFNFPGTRN 153
Query: 185 SLVSMTASHEGVKVHAIFVSLETGVYLKEHARGETGECCIFPESNRGSW----SVLMVSV 240
++ M+ G V + +L+ L+ RG I G W S+ VSV
Sbjct: 154 EVIPMSHPGAGDIVAIMIGNLKGTKILQSIQRGIQVTMVIEVGKKHGPWVNHYSIFFVSV 213
Query: 241 -FSLIVVFALFAVAFITPRPWRPWPGQNQPLSRRLDS---KVVEALPCFLFSSASSSQCH 296
F +I + F + R R Q++ R+L + K + L
Sbjct: 214 SFFIITAATVGYFIFYSARRLRNARAQSRK-QRQLKADAKKAIGKLQLRTLKQGDKEIGP 272
Query: 297 GGETCAICLEDYQDGEKLKVLSCKH 321
G++CA+C+E Y+ + +++L+C H
Sbjct: 273 DGDSCAVCIELYKPNDLVRILTCNH 297
>sp|Q2TA44|RN148_BOVIN RING finger protein 148 OS=Bos taurus GN=RNF148 PE=2 SV=1
Length = 303
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 79/206 (38%), Gaps = 28/206 (13%)
Query: 131 DACSPLSNPVASNDADHINFVLIVRGQCIFEDKIRNAQAAGYRAAIVYNDREKGSLVSMT 190
+AC+P++N D LI RG C F KI A G I+YN G+ V
Sbjct: 84 NACNPMTNFSRPGQTDPW-LALIERGGCTFTRKINVAAEKGANGVIIYNYPGTGNKV-FP 141
Query: 191 ASHEGVK-VHAIFVS----------LETGVYLKEHARGETGECCIFPESNRGSWSVLMVS 239
SH+G + + A+ + ++ GVY+K I E R L
Sbjct: 142 MSHQGTENIVAVMIGNLKGMELLHLIQKGVYVK-----------IIIEVGRMHMPWLSHY 190
Query: 240 VFSLIVVFALFAVAFITPRPWRPW-PGQNQPLSRRLDSKVVEA---LPCFLFSSASSSQC 295
+ SL WRP P + R+L + V +A L +
Sbjct: 191 IMSLFTFLTATVAYLFLYCAWRPRGPNFSTRRQRQLKADVRKAIGKLQLRVLQEGDKELE 250
Query: 296 HGGETCAICLEDYQDGEKLKVLSCKH 321
+ C +C + Y+ + +++L+CKH
Sbjct: 251 PDEDNCVVCFDIYKPQDVVRILTCKH 276
>sp|Q6GQB9|EDEM3_XENLA ER degradation-enhancing alpha-mannosidase-like protein 3
OS=Xenopus laevis GN=edem3 PE=2 SV=2
Length = 913
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 108 PAKFAVDVNS--SGTCGALHVADPADACSPLSNPVASNDADHINFVLIVRGQCIFEDKIR 165
PA+F +D++ +G G + A+P CS ++N A L+ RGQC+F +K R
Sbjct: 653 PAQFGMDLSKHLAGAQGLVARAEPYSGCSDITN----GQAIQGKIALMQRGQCMFAEKAR 708
Query: 166 NAQAAGYRAAIVYNDREKGS 185
N Q AG IV +D E S
Sbjct: 709 NVQKAGAIGGIVIDDNEGSS 728
>sp|Q5RF74|RN128_PONAB E3 ubiquitin-protein ligase RNF128 OS=Pongo abelii GN=RNF128 PE=2
SV=1
Length = 428
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 88/205 (42%), Gaps = 15/205 (7%)
Query: 131 DACSPLSN---PVASNDADHINFVLIVR--GQCIFEDKIRNAQAAGYRAAIVYN-DREKG 184
+AC+P +N P ++++ +++ G C F DKI A G A+++N +
Sbjct: 94 NACNPHTNFTVPTVWGSTVQVSWLALIQRGGGCTFADKIHLAYERGASGAVIFNFPGTRN 153
Query: 185 SLVSMTASHEGVKVHAIFVSLETGVYLKEHARGETGECCIFPESNRGSW----SVLMVSV 240
++ M+ G V + +L+ L+ RG I G W S+ VSV
Sbjct: 154 EVIPMSHPGAGDIVAIMIGNLKGTKILQSIQRGIQVTMVIEVGKKHGPWVNHYSIFFVSV 213
Query: 241 -FSLIVVFALFAVAFITPRPWRPWPGQNQPLSRRLDS---KVVEALPCFLFSSASSSQCH 296
F +I + F + R R Q++ R+L + K + L
Sbjct: 214 SFFIITAATVGYFIFYSARRLRNARAQSRK-QRQLKADAKKAIGRLQLRTLKQGDREIGP 272
Query: 297 GGETCAICLEDYQDGEKLKVLSCKH 321
G++CA+C+E Y+ + +++L+C H
Sbjct: 273 DGDSCAVCIELYKPNDLVRILTCNH 297
>sp|Q8TEB7|RN128_HUMAN E3 ubiquitin-protein ligase RNF128 OS=Homo sapiens GN=RNF128 PE=1
SV=1
Length = 428
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 19/207 (9%)
Query: 131 DACSPLSN---PVASNDADHINFVLIVR--GQCIFEDKIRNAQAAGYRAAIVYN-DREKG 184
+AC+P +N P ++++ +++ G C F DKI A G A+++N +
Sbjct: 94 NACNPHTNFTVPTVWGSTVQVSWLALIQRGGGCTFADKIHLAYERGASGAVIFNFPGTRN 153
Query: 185 SLVSMTASHEG-VKVHAIFV-SLETGVYLKEHARGETGECCIFPESNRGSW----SVLMV 238
++ M SH G V + AI + +L+ L+ RG I G W S+ V
Sbjct: 154 EVIPM--SHPGAVDIVAIMIGNLKGTKILQSIQRGIQVTMVIEVGKKHGPWVNHYSIFFV 211
Query: 239 SV-FSLIVVFALFAVAFITPRPWRPWPGQNQPLSRRLDS---KVVEALPCFLFSSASSSQ 294
SV F +I + F + R R Q++ R+L + K + L
Sbjct: 212 SVSFFIITAATVGYFIFYSARRLRNARAQSRK-QRQLKADAKKAIGRLQLRTLKQGDKEI 270
Query: 295 CHGGETCAICLEDYQDGEKLKVLSCKH 321
G++CA+C+E Y+ + +++L+C H
Sbjct: 271 GPDGDSCAVCIELYKPNDLVRILTCNH 297
>sp|Q29RU0|RN128_BOVIN E3 ubiquitin-protein ligase RNF128 OS=Bos taurus GN=RNF128 PE=2
SV=1
Length = 431
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 91/208 (43%), Gaps = 18/208 (8%)
Query: 131 DACSPLSN---PVASND---ADHINFVLIVR--GQCIFEDKIRNAQAAGYRAAIVYN-DR 181
+AC+P +N P D + ++++ +++ G C F DKI A G A+++N
Sbjct: 94 NACNPHTNFTVPTVPGDWGSSVQVSWLALIQRGGGCTFADKIHLAYERGASGAVIFNFPG 153
Query: 182 EKGSLVSMTASHEGVKVHAIFVSLETGVYLKEHARGETGECCIFPESNRGSW----SVLM 237
+ ++ M+ G V + +L+ L+ RG I G W S+
Sbjct: 154 TRNEVIPMSHPGAGDIVAIMIGNLKGTKILQSIQRGIQVTMVIEVGKKHGPWVNHYSIFF 213
Query: 238 VSV-FSLIVVFALFAVAFITPRPWRPWPGQNQPLSRRLDSKVVEALPCFLFSSASSSQCH 296
VSV F +I + F + R R Q++ R+L + +A+ +
Sbjct: 214 VSVSFFIITAATVGYFIFYSARRLRNARAQSRK-QRQLKADAKKAIGRLQLRTQKQGDKE 272
Query: 297 ---GGETCAICLEDYQDGEKLKVLSCKH 321
G++CA+C+E Y+ + +++L+C H
Sbjct: 273 IGPDGDSCAVCIELYKPNDLVRILTCNH 300
>sp|P87139|YDM9_SCHPO Uncharacterized RING finger protein C57A7.09 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC57A7.09 PE=1 SV=1
Length = 372
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 86/225 (38%), Gaps = 64/225 (28%)
Query: 142 SNDADHINFVLIVRGQCIFEDKIRNAQAAGYRAAIVYNDREKGS--LVSMTASH--EGVK 197
S D ++F+L+ RG+C + DK AQ G++ IV ++R S L M A + K
Sbjct: 136 SKDEAILDFLLVQRGKCTYFDKALEAQRLGFKGVIVGDNRSPSSFRLHYMVAPDKVDESK 195
Query: 198 VHAIFVSLETGVY--------------LKEHARGETGECCIFPESNRGSWSVLMV---SV 240
VH + + T Y LK +A+ E E W L+ S+
Sbjct: 196 VHIPSLFVSTSSYNLLWSDLLHSYRQPLKLYAKPE--------ELGDMFWPFLLCFSPSI 247
Query: 241 FSLIVVFALFAVAFITPRPWRPWPGQNQPLSRRLDSKVVEALPCFLFS------------ 288
LI V AL FI R +R + +RR +E LP S
Sbjct: 248 IMLITVQALAIRKFI--RTYR-----TKSKTRRF----IEDLPSRTISREGFYSEEEEIE 296
Query: 289 ------------SASSSQCHGGETCAICLEDYQDGEKLKVLSCKH 321
S+ + G C ICLE + G+K+ L CKH
Sbjct: 297 NSTQNGELVPLMDESTRRATFGVECVICLESFTKGDKVVALPCKH 341
>sp|Q8RXX9|ATL6_ARATH E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana GN=ATL6
PE=1 SV=2
Length = 398
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 271 SRRLDSKVVEALPCFLFSSASSSQCHGGE-TCAICLEDYQDGEKLKVL-SCKH 321
+R LD VVE P FL+S + + GE CAICL +++D E L++L C H
Sbjct: 97 ARGLDVSVVETFPTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLPKCDH 149
>sp|Q5DTZ6|RN150_MOUSE RING finger protein 150 OS=Mus musculus GN=Rnf150 PE=2 SV=2
Length = 437
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 87/200 (43%), Gaps = 12/200 (6%)
Query: 132 ACSPLSNPVASNDADHINFVLIVRGQCIFEDKIRNAQAAGYRAAIVYNDREKGSLVSMTA 191
AC P + A H LI +G C + DKIRNA A +++N + ++T
Sbjct: 100 ACDPNTKFAAPAHGKHW-IALIPKGNCTYRDKIRNAFLQNASAVVIFN-VGSNTNETITM 157
Query: 192 SHEGVK-VHAIFVSLETG---VYLKEHARGETGECCIFPESNR---GSWSVLMVSV-FSL 243
H GV+ + AI + G V L E T I + + SV+ VS+ F +
Sbjct: 158 PHAGVEDIVAIMIPEPKGKEIVSLLERNITVTMYITIGTRNLQKYVSRTSVVFVSISFIV 217
Query: 244 IVVFALFAVAFITPRPWRPWPGQNQPLSRRLDS--KVVEALPCFLFSSASSSQCHGGETC 301
+++ +L + F + +R +++ R D+ K + L + C
Sbjct: 218 LMIISLAWLVFYYIQRFRYANARDRNQRRLGDAAKKAISKLQVRTIRKGDKETESDFDNC 277
Query: 302 AICLEDYQDGEKLKVLSCKH 321
A+C+E Y+ + +++L C+H
Sbjct: 278 AVCIEGYKPNDVVRILPCRH 297
>sp|Q8NC42|RN149_HUMAN E3 ubiquitin-protein ligase RNF149 OS=Homo sapiens GN=RNF149 PE=2
SV=2
Length = 400
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 74/179 (41%), Gaps = 10/179 (5%)
Query: 152 LIVRGQCIFEDKIRNAQAAGYRAAIVYNDREKGSLVSMTASHEGV-KVHAIFVSLETGVY 210
L+ RG C F+DK+ A A ++YN+ G+ +++ SH G + I +S G
Sbjct: 112 LVARGGCTFKDKVLVAARRNASAVVLYNEERYGN-ITLPMSHAGTGNIVVIMISYPKGRE 170
Query: 211 LKEHARGETGECCIFPESNR-------GSWSVLMVSVFSLIVVFALFAVAFITPRPWRPW 263
+ E + R G V + F +++ +L + F + +
Sbjct: 171 ILELVQKGIPVTMTIGVGTRHVQEFISGQSVVFVAIAFITMMIISLAWLIFYYIQRFLYT 230
Query: 264 PGQNQPLSRRLDS-KVVEALPCFLFSSASSSQCHGGETCAICLEDYQDGEKLKVLSCKH 321
Q S R ++ KV+ L E CA+C+E+++ + +++L CKH
Sbjct: 231 GSQIGSQSHRKETKKVIGQLLLHTVKHGEKGIDVDAENCAVCIENFKVKDIIRILPCKH 289
>sp|Q6AY01|RN133_RAT E3 ubiquitin-protein ligase RNF133 OS=Rattus norvegicus GN=Rnf133
PE=2 SV=1
Length = 381
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 76/203 (37%), Gaps = 22/203 (10%)
Query: 131 DACSPLSNPVASNDADHINFVLIVRGQCIFEDKIRNAQAAGYRAAIVYNDREKGSLVSMT 190
+AC P ++ + + + LI RG C F KI+ A G R I+YN G+ V
Sbjct: 84 NACDPNTSFILPRNKEPW-IALIERGGCAFTQKIKVASENGARGVIIYNFPGTGNQVFPM 142
Query: 191 ASHEGVKVHAIFVSLETGVYLKEHARGETGECCIFPESNRGS-------WSVLMVSVFSL 243
+ + + + G+ + R + E R + M+ +
Sbjct: 143 SHQAFEDIVVVMIGNVKGMEILHLIRKGV-HVTVMVEVGRKHVIWLNHYFVSFMIVTTAT 201
Query: 244 IVVFALFA-----VAFITPRPWRPWPGQNQPLSRRLDSKVVEALPCFLFSSASSSQCHGG 298
+ F + VA I R W+ L+R L K L +
Sbjct: 202 LAYFTFYHIRRLWVARIEDRRWKR-------LTREL-KKAFGQLQVRILKEGDEEVSPNA 253
Query: 299 ETCAICLEDYQDGEKLKVLSCKH 321
++C IC E Y+ E +++L+CKH
Sbjct: 254 DSCVICFEAYKPNEIVRILTCKH 276
>sp|Q9ULK6|RN150_HUMAN RING finger protein 150 OS=Homo sapiens GN=RNF150 PE=2 SV=2
Length = 438
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 81/182 (44%), Gaps = 11/182 (6%)
Query: 150 FVLIVRGQCIFEDKIRNAQAAGYRAAIVYNDREKGSLVSMTASHEGVK-VHAIFVSLETG 208
LI +G C + DKIRNA A +++N + ++T H GV+ + AI + G
Sbjct: 118 IALIPKGNCTYRDKIRNAFLQNASAVVIFN-VGSNTNETITMPHAGVEDIVAIMIPEPKG 176
Query: 209 ---VYLKEHARGETGECCIFPESNR---GSWSVLMVSV-FSLIVVFALFAVAFITPRPWR 261
V L E T I + + SV+ VS+ F ++++ +L + F + +R
Sbjct: 177 KEIVSLLERNITVTMYITIGTRNLQKYVSRTSVVFVSISFIVLMIISLAWLVFYYIQRFR 236
Query: 262 PWPGQNQPLSRRLDS--KVVEALPCFLFSSASSSQCHGGETCAICLEDYQDGEKLKVLSC 319
+++ R D+ K + L + CA+C+E Y+ + +++L C
Sbjct: 237 YANARDRNQRRLGDAAKKAISKLQIRTIKKGDKETESDFDNCAVCIEGYKPNDVVRILPC 296
Query: 320 KH 321
+H
Sbjct: 297 RH 298
>sp|P25152|BSAP_BACSU Aminopeptidase YwaD OS=Bacillus subtilis (strain 168) GN=ywaD PE=1
SV=2
Length = 455
Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Query: 150 FVLIVRGQCIFEDKIRNAQAAGYRAAIVYNDREKGSLVSMTASHEGVKV 198
LI RG + +K +NA+AAG +A I+YN++E SLV MT + G KV
Sbjct: 148 IALISRGDLTYYEKAKNAEAAGAKAVIIYNNKE--SLVPMTPNLSGNKV 194
>sp|Q8LGA5|ATL31_ARATH E3 ubiquitin-protein ligase ATL31 OS=Arabidopsis thaliana GN=ATL31
PE=1 SV=2
Length = 368
Score = 45.1 bits (105), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 267 NQPLSRRLDSKVVEALPCFLFSSASSSQC-HGGETCAICLEDYQDGEKLKVL-SCKH 321
N ++R LD++ +E P F++S + + G CAICL +++D E L++L C H
Sbjct: 89 NATVARGLDAETIETFPTFVYSEVKTQKIGKGALECAICLNEFEDDETLRLLPKCDH 145
>sp|Q14B02|RN133_MOUSE E3 ubiquitin-protein ligase RNF133 OS=Mus musculus GN=Rnf133 PE=1
SV=1
Length = 382
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 75/203 (36%), Gaps = 22/203 (10%)
Query: 131 DACSPLSNPVASNDADHINFVLIVRGQCIFEDKIRNAQAAGYRAAIVYNDREKGSLVSMT 190
+AC P + + + + LI RG C F KI+ A G R I+YN G+ V
Sbjct: 84 NACDPNTTFILPRNKEPW-IALIERGGCAFTQKIKVASEHGARGVIIYNFPGTGNQVFPM 142
Query: 191 ASHEGVKVHAIFVSLETGVYLKEHARGETGECCIFPESNRGS-------WSVLMVSVFSL 243
+ + + + G+ + R + E R + M+ +
Sbjct: 143 SHQAFEDIVVVMIGNIKGMEILHLIRKGV-HVTVMVEVGRKHVIWLNHYFVSFMIVTTAT 201
Query: 244 IVVFALFA-----VAFITPRPWRPWPGQNQPLSRRLDSKVVEALPCFLFSSASSSQCHGG 298
+ F + VA I R W+ L+R L K L +
Sbjct: 202 LAYFTFYHIRRLWVARIENRRWKR-------LTREL-KKAFGQLQVRVLKEGDEEVNPNA 253
Query: 299 ETCAICLEDYQDGEKLKVLSCKH 321
++C IC E Y+ E +++L+CKH
Sbjct: 254 DSCVICFEAYKPNEIVRILTCKH 276
>sp|Q95K04|RN133_MACFA E3 ubiquitin-protein ligase RNF133 OS=Macaca fascicularis GN=RNF133
PE=2 SV=1
Length = 376
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 77/188 (40%), Gaps = 29/188 (15%)
Query: 150 FVLIVRGQCIFEDKIRNAQAAGYRAAIVYNDREKGS-------------LVSMTASHEGV 196
LI RG C F KI+ A G I+YN G+ +V M + +G
Sbjct: 102 LALIERGGCTFTQKIKVAAEKGASGVIIYNFPGTGNQVFPMFHQAFEDVVVVMIGNLKGT 161
Query: 197 KVHAIFVSLETGVYLKEHARGETG-ECCIFPESNRGSWSVLMVSVFSLIVVFAL--FAVA 253
+ IF ++ GV + A E G + I+ S+ ++ + + + + + +A
Sbjct: 162 E---IFHLIKKGVLIT--AMVEVGRKHIIWMNHYLVSFVIVTTATLAYFIFYHIHRLCLA 216
Query: 254 FITPRPWRPWPGQNQPLSRRLDSKVVEALPCFLFSSASSSQCHGGETCAICLEDYQDGEK 313
I R W+ Q +L +VV+ G++C IC E Y+ +
Sbjct: 217 RIQNRRWQRLTTDLQNAFGQLQLRVVK--------EGDEEINPNGDSCVICFEHYKPNDI 268
Query: 314 LKVLSCKH 321
+++L+CKH
Sbjct: 269 VRILTCKH 276
>sp|Q4V3B8|SIPL3_ARATH Signal peptide peptidase-like 3 OS=Arabidopsis thaliana GN=SPPL3
PE=2 SV=1
Length = 540
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 6/57 (10%)
Query: 127 ADPADACSPLSNPVASNDADHINFVLIVRGQCIFEDKIRNAQAAGYRAAIVYNDREK 183
DP D+CS LS+ + + A L +RG C F +K ++A+AAG A +V ND+E
Sbjct: 91 VDPLDSCSHLSSRLDGHIA------LSIRGNCAFTEKAKHAEAAGASALLVINDKED 141
>sp|Q8WVZ7|RN133_HUMAN E3 ubiquitin-protein ligase RNF133 OS=Homo sapiens GN=RNF133 PE=2
SV=1
Length = 376
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 77/188 (40%), Gaps = 29/188 (15%)
Query: 150 FVLIVRGQCIFEDKIRNAQAAGYRAAIVYNDREKGS-------------LVSMTASHEGV 196
LI RG C F KI+ A G I+YN G+ +V M + +G
Sbjct: 102 LALIERGGCTFTQKIKVATEKGASGVIIYNVPGTGNQVFPMFHQAFEDVVVVMIGNLKGT 161
Query: 197 KVHAIFVSLETGVYLKEHARGETG-ECCIFPESNRGSWSVLMVSVFSLIVVFAL--FAVA 253
+ IF ++ GV + A E G + I+ S+ ++ + + + + + +A
Sbjct: 162 E---IFHLIKKGVLIT--AVVEVGRKHIIWMNHYLVSFVIVTTATLAYFIFYHIHRLCLA 216
Query: 254 FITPRPWRPWPGQNQPLSRRLDSKVVEALPCFLFSSASSSQCHGGETCAICLEDYQDGEK 313
I R W+ Q +L +VV+ G++C IC E Y+ +
Sbjct: 217 RIQNRRWQRLTTDLQNTFGQLQLRVVK--------EGDEEINPNGDSCVICFERYKPNDI 268
Query: 314 LKVLSCKH 321
+++L+CKH
Sbjct: 269 VRILTCKH 276
>sp|Q8W469|SIPL2_ARATH Signal peptide peptidase-like 2 OS=Arabidopsis thaliana GN=SPPL2
PE=2 SV=1
Length = 540
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 6/60 (10%)
Query: 124 LHVADPADACSPLSNPVASNDADHINFVLIVRGQCIFEDKIRNAQAAGYRAAIVYNDREK 183
L A+P D+C+PL N ++ + V++ RG C F K NA+AAG A ++ N++++
Sbjct: 87 LVFANPRDSCTPLKNKLSGD------VVIVERGNCRFTAKANNAEAAGASALLIINNQKE 140
>sp|Q84W40|ATL11_ARATH RING-H2 finger protein ATL11 OS=Arabidopsis thaliana GN=ATL11 PE=2
SV=2
Length = 404
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 51/99 (51%), Gaps = 13/99 (13%)
Query: 235 VLMVSVFSLIVVFALF---------AVAFITPRPWRPWPGQNQPLSRRLDSKVVEALPCF 285
+++VSVF + F+++ + + P W N+ +R LD+ ++E P F
Sbjct: 68 IVLVSVFFFLGFFSVYIRRCLERVMGMDYGNPNDAGNWLATNRQQARGLDASIIETFPTF 127
Query: 286 LFSSASSSQCHGGET--CAICLEDYQDGEKLKVL-SCKH 321
+S+ + + G E C++CL +++D E L+++ C H
Sbjct: 128 QYSTVKTLRI-GKEALECSVCLNEFEDDETLRLIPKCCH 165
>sp|Q9LQM2|ATL81_ARATH RING-H2 finger protein ATL81 OS=Arabidopsis thaliana GN=ATL81 PE=2
SV=1
Length = 332
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 258 RPWRPWPGQNQPLSRRLDSKVVEALPCFLFSSASSSQCHGGETCAICLEDYQDGEKLKVL 317
RP N P + LDSK++E+ P + +S HG + C+ICL ++ D + ++++
Sbjct: 115 RPSNLIQPSNPPENLGLDSKIIESFPEYPYSVKD----HGTDQCSICLTEFMDDDTIRLI 170
Query: 318 S-CKHG 322
S C H
Sbjct: 171 STCNHS 176
>sp|Q6NKR1|ATL28_ARATH RING-H2 finger protein ATL28 OS=Arabidopsis thaliana GN=ATL28 PE=2
SV=1
Length = 254
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 51/103 (49%), Gaps = 17/103 (16%)
Query: 234 SVLMVSVFSLIVV---FALFAVAFITPRPWRPWPGQNQPL-----------SRRLDSKVV 279
+V++ V ++ F+LF F+ R + W Q P + LD ++
Sbjct: 24 TVVLTGVLLFVIFAGFFSLFLWQFLLNRLFTTWNLQRTPYGDLIHVATPPENTGLDPFII 83
Query: 280 EALPCFLFSSASSSQCHGGETCAICLEDYQDGEKLKVLS-CKH 321
+ P F +SSA+ HG E CAICL ++ D + +++++ C+H
Sbjct: 84 RSFPVFHYSSATKKN-HGTE-CAICLSEFSDEDTVRLITVCRH 124
>sp|Q68DV7|RNF43_HUMAN E3 ubiquitin-protein ligase RNF43 OS=Homo sapiens GN=RNF43 PE=1
SV=1
Length = 783
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 59/119 (49%), Gaps = 16/119 (13%)
Query: 212 KEHARGETGECCIFPESNRGSWSVLMVSVFSLIVVFALFAVAFIT--PRPWRPWPGQ--- 266
K H R E E +P+ + W ++++V I V L +V I PR RP P Q
Sbjct: 181 KAHVRIELKEPPAWPDYD--VW--ILMTVVGTIFVIILASVLRIRCRPRHSRPDPLQQRT 236
Query: 267 ----NQPLSRRLDSKVVEALPCFLFSSASSSQCHGGETCAICLEDYQDGEKLKVLSCKH 321
+Q +RR + +A + S +S C CAICLE++ +G++L+V+SC H
Sbjct: 237 AWAISQLATRRYQASCRQARGEWPDSGSS---CSSAPVCAICLEEFSEGQELRVISCLH 292
>sp|Q9SJJ7|ATL57_ARATH RING-H2 finger protein ATL57 OS=Arabidopsis thaliana GN=ATL57 PE=2
SV=1
Length = 237
Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 6/70 (8%)
Query: 255 ITPRPWRPWPGQNQPLS--RRLDSKVVEALPCFLFSSASSSQCHGGETCAICLEDYQDGE 312
++PR ++P S R LDS+ V +LP + ++ A+ + E C ICL D+++GE
Sbjct: 95 MSPRRLSTSVVVSRPYSFRRGLDSQAVRSLPVYRYTKAAKQR---NEDCVICLSDFEEGE 151
Query: 313 KLKVL-SCKH 321
+KV+ C H
Sbjct: 152 TVKVIPHCGH 161
>sp|Q5NCP0|RNF43_MOUSE E3 ubiquitin-protein ligase RNF43 OS=Mus musculus GN=Rnf43 PE=2
SV=1
Length = 784
Score = 40.8 bits (94), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 14/96 (14%)
Query: 236 LMVSVFSLIVVFALFAVAFITPRPWRPWPGQNQPLSRRLDSKVVEALPCFLFSSA----- 290
++++V + V L +V I RP P PL +R ++ + L + +
Sbjct: 201 ILLTVVGTVFVIILASVLRIRCRPHHSRP---DPLQQR-TARAISQLATRRYQAGCRRAR 256
Query: 291 -----SSSQCHGGETCAICLEDYQDGEKLKVLSCKH 321
S S C CAICLE++ +G++L+V+SC H
Sbjct: 257 AEWPDSGSSCSSTPVCAICLEEFSEGQELRVISCLH 292
>sp|Q8NZ80|C5AP_STRP8 C5a peptidase OS=Streptococcus pyogenes serotype M18 (strain
MGAS8232) GN=scpA PE=3 SV=1
Length = 1150
Score = 40.8 bits (94), Expect = 0.016, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 152 LIVRGQCIFEDKIRNAQAAGYRAAIVYNDREKGSLVSMTASHEGVKVHAIFVSLETGVYL 211
LI RG F+DKI NA+ AG ++Y++++KG + + + + A F+S + G+ L
Sbjct: 390 LIERGDIDFKDKIANAKKAGAVGVLIYDNQDKGFPIELPNVDQ---MPAAFISRKDGLLL 446
Query: 212 KEHAR 216
KE+ +
Sbjct: 447 KENPQ 451
>sp|Q5X9R0|C5AP_STRP6 C5a peptidase OS=Streptococcus pyogenes serotype M6 (strain ATCC
BAA-946 / MGAS10394) GN=scpA PE=3 SV=1
Length = 1184
Score = 40.8 bits (94), Expect = 0.016, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 152 LIVRGQCIFEDKIRNAQAAGYRAAIVYNDREKGSLVSMTASHEGVKVHAIFVSLETGVYL 211
LI RG F+DKI NA+ AG ++Y++++KG + + + + A F+S + G+ L
Sbjct: 390 LIERGDIDFKDKIANAKKAGAVGVLIYDNQDKGFPIELPNVDQ---MPAAFISRKDGLLL 446
Query: 212 KEHAR 216
KE+ +
Sbjct: 447 KENPQ 451
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.136 0.447
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 118,857,682
Number of Sequences: 539616
Number of extensions: 4586535
Number of successful extensions: 11404
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 73
Number of HSP's that attempted gapping in prelim test: 11240
Number of HSP's gapped (non-prelim): 163
length of query: 331
length of database: 191,569,459
effective HSP length: 118
effective length of query: 213
effective length of database: 127,894,771
effective search space: 27241586223
effective search space used: 27241586223
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 61 (28.1 bits)