Citrus Sinensis ID: 020064
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 331 | 2.2.26 [Sep-21-2011] | |||||||
| P93732 | 380 | Proline iminopeptidase OS | yes | no | 0.948 | 0.826 | 0.831 | 1e-159 | |
| O83041 | 321 | Probable proline iminopep | N/A | no | 0.957 | 0.987 | 0.596 | 1e-104 | |
| Q87DF8 | 313 | Proline iminopeptidase OS | yes | no | 0.927 | 0.980 | 0.568 | 2e-98 | |
| Q9PD69 | 313 | Proline iminopeptidase OS | yes | no | 0.927 | 0.980 | 0.564 | 6e-98 | |
| O32449 | 317 | Proline iminopeptidase OS | N/A | no | 0.933 | 0.974 | 0.529 | 3e-97 | |
| P52279 | 313 | Proline iminopeptidase OS | yes | no | 0.930 | 0.984 | 0.558 | 3e-96 | |
| P42786 | 310 | Proline iminopeptidase OS | yes | no | 0.918 | 0.980 | 0.522 | 2e-90 | |
| Q9JZR6 | 310 | Proline iminopeptidase OS | yes | no | 0.918 | 0.980 | 0.522 | 3e-90 | |
| Q9JUV1 | 310 | Proline iminopeptidase OS | yes | no | 0.918 | 0.980 | 0.519 | 9e-90 | |
| Q9S2L4 | 323 | Probable proline iminopep | yes | no | 0.933 | 0.956 | 0.404 | 6e-59 |
| >sp|P93732|PIP_ARATH Proline iminopeptidase OS=Arabidopsis thaliana GN=PIP PE=2 SV=3 | Back alignment and function desciption |
|---|
Score = 562 bits (1448), Expect = e-159, Method: Compositional matrix adjust.
Identities = 262/315 (83%), Positives = 286/315 (90%), Gaps = 1/315 (0%)
Query: 14 NLYPYVEPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYR 73
LY +EPYS+G LKVSD+HT+YWEQSG P GHPVVFLHGGPGGGT PSNRRFFDP+FYR
Sbjct: 65 TLYAPIEPYSSGNLKVSDVHTLYWEQSGKPDGHPVVFLHGGPGGGTAPSNRRFFDPEFYR 124
Query: 74 IILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLA 133
I+LFDQRGAGKSTPHACL++NTTWDL++DIEKLR+HL+IPEW VFGGSWGSTLALAYS +
Sbjct: 125 IVLFDQRGAGKSTPHACLEENTTWDLVNDIEKLREHLKIPEWLVFGGSWGSTLALAYSQS 184
Query: 134 HPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENER-SCFVDAYSKR 192
HPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWE FRDLIPENER S VDAY KR
Sbjct: 185 HPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWEEFRDLIPENERGSSLVDAYHKR 244
Query: 193 LNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFP 252
LNSDD E QYAAARAWTKWEMMTA+L PN EN+++ EDD FSLAFARIENHYF+NKGFFP
Sbjct: 245 LNSDDLEIQYAAARAWTKWEMMTAYLRPNLENVQKAEDDKFSLAFARIENHYFVNKGFFP 304
Query: 253 SDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGI 312
SDS LLDN+D IRHI TIVQGRYDVCCPMMSAWDLHKAWPEA+ K+V DAGHSANEPGI
Sbjct: 305 SDSHLLDNVDKIRHIKTTIVQGRYDVCCPMMSAWDLHKAWPEAELKIVYDAGHSANEPGI 364
Query: 313 AAELVATNEKLKNLI 327
+AELV NEK+K L+
Sbjct: 365 SAELVVANEKMKALM 379
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Specifically catalyzes the removal of N-terminal proline residues from peptides. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 4EC: .EC: 1EC: 1EC: .EC: 5 |
| >sp|O83041|PIP_PLEBO Probable proline iminopeptidase OS=Plectonema boryanum GN=pip PE=3 SV=1 | Back alignment and function description |
|---|
Score = 378 bits (971), Expect = e-104, Method: Compositional matrix adjust.
Identities = 189/317 (59%), Positives = 228/317 (71%)
Query: 14 NLYPYVEPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYR 73
LYP + PY +G+L VS +HTIY+EQSGNP G PVVFLHGGPGGGT P+ R++FDP +R
Sbjct: 3 QLYPAIAPYQSGMLPVSALHTIYYEQSGNPNGKPVVFLHGGPGGGTIPTYRQYFDPSKWR 62
Query: 74 IILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLA 133
IILFDQRGAGKSTPHA L +NTTWDL+ DIEKLR HL I W VFGGSWGSTL+LAYS
Sbjct: 63 IILFDQRGAGKSTPHAELRENTTWDLVSDIEKLRSHLNIDRWFVFGGSWGSTLSLAYSQT 122
Query: 134 HPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRL 193
HPD+ GL+LRGIFLLR+KEI WFY+ GA+ I+PDAWE + + IP ER + AY +RL
Sbjct: 123 HPDRCLGLILRGIFLLRRKEILWFYQDGASWIFPDAWEHYLEPIPPEERDDMISAYYRRL 182
Query: 194 NSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPS 253
S D E + AA+AW+ WE T+ L+ + + DD F+ AFARIE HYF+N+GFF +
Sbjct: 183 TSKDAEIRSTAAKAWSVWEGTTSRLIVDPSLQSKFADDEFADAFARIECHYFINRGFFET 242
Query: 254 DSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIA 313
D LL N D I HI IVQGRYDV CPM SAW LHKA PE++ VV DAGHS E GI
Sbjct: 243 DDQLLQNCDRIAHIPTVIVQGRYDVVCPMTSAWALHKALPESELIVVPDAGHSMMEAGIL 302
Query: 314 AELVATNEKLKNLIKNG 330
+ L+ ++ NG
Sbjct: 303 SALIDATDRFVAQKTNG 319
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Specifically catalyzes the removal of N-terminal proline residues from peptides. Plectonema boryanum (taxid: 1184) EC: 3 EC: . EC: 4 EC: . EC: 1 EC: 1 EC: . EC: 5 |
| >sp|Q87DF8|PIP_XYLFT Proline iminopeptidase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=pip PE=3 SV=1 | Back alignment and function description |
|---|
Score = 358 bits (920), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 175/308 (56%), Positives = 218/308 (70%), Gaps = 1/308 (0%)
Query: 14 NLYPYVEPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYR 73
LYP V P+ G+L V D H +Y+EQ GNP G PVV LHGGPGGG RRF DPD YR
Sbjct: 3 TLYPEVTPFDHGMLCVDDSHRLYYEQCGNPHGKPVVILHGGPGGGCNDKMRRFHDPDKYR 62
Query: 74 IILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLA 133
I+LFDQRGAG+S PHA L NTTWDL+ DIEKLR L I WQVFGGSWGSTLALAY+
Sbjct: 63 IVLFDQRGAGRSMPHANLTNNTTWDLVADIEKLRVALGITRWQVFGGSWGSTLALAYAQT 122
Query: 134 HPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRL 193
HP++ T LVLRGIF+LR+ E++WFY+ GA+ ++PDAW+ + IP ER + A+ +RL
Sbjct: 123 HPEQTTELVLRGIFMLRRWELEWFYQEGASRLFPDAWDRYIAAIPPVERHDLISAFHRRL 182
Query: 194 NSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPS 253
SDD+ T+ AAA+AW+ WE T+ L +++ I E+ F+LAFARIENHYF+N GFF
Sbjct: 183 TSDDEATRLAAAQAWSLWEGATSCLYMDQDFIASHENPHFALAFARIENHYFVNGGFFEV 242
Query: 254 DSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEP-GI 312
+ LL + I +I IV GRYDV CP+ +AWDLHKAWP+A K+ AGHSA EP I
Sbjct: 243 EDQLLRDAQRIANIPGVIVHGRYDVVCPLQNAWDLHKAWPKASLKITPGAGHSAFEPQNI 302
Query: 313 AAELVATN 320
A + AT+
Sbjct: 303 DALVCATD 310
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Specifically catalyzes the removal of N-terminal proline residues from peptides. Xylella fastidiosa (strain Temecula1 / ATCC 700964) (taxid: 183190) EC: 3 EC: . EC: 4 EC: . EC: 1 EC: 1 EC: . EC: 5 |
| >sp|Q9PD69|PIP_XYLFA Proline iminopeptidase OS=Xylella fastidiosa (strain 9a5c) GN=pip PE=3 SV=1 | Back alignment and function description |
|---|
Score = 357 bits (917), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 174/308 (56%), Positives = 219/308 (71%), Gaps = 1/308 (0%)
Query: 14 NLYPYVEPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYR 73
LYP V P+ GIL V D H +Y+EQ GNP G PVV LHGGPG G RRF DPD YR
Sbjct: 3 TLYPEVTPFEHGILCVDDNHRLYYEQCGNPHGKPVVILHGGPGSGCNDKMRRFHDPDKYR 62
Query: 74 IILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLA 133
I+LFDQRGAG+STPHA L NTTWDL+ DIEKLR L I WQVFGGSWGSTLALAY+
Sbjct: 63 IVLFDQRGAGRSTPHANLTNNTTWDLVADIEKLRVALGITRWQVFGGSWGSTLALAYAQT 122
Query: 134 HPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRL 193
HP++ T LVLRGIF+LR+ E++WFY+ GA+ ++PDAW+ + +IP ER + A+ +RL
Sbjct: 123 HPEQTTELVLRGIFMLRRWELEWFYQEGASHLFPDAWDRYIAVIPPVERHDLISAFHRRL 182
Query: 194 NSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPS 253
S+D+ T+ AAA+AW+ WE T+ L +++ I E+ F+LAFARIENHYF+N GFF
Sbjct: 183 TSEDEATRLAAAQAWSLWEGATSCLYMDQDFIASHENPHFALAFARIENHYFVNGGFFEV 242
Query: 254 DSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEP-GI 312
++ LL + I +I IV GRYDV CP+ +AWDLHK WP+A K+ AGHSA EP I
Sbjct: 243 ENQLLRDAQRIANIPGVIVHGRYDVVCPLQNAWDLHKVWPKASLKITPGAGHSAFEPQNI 302
Query: 313 AAELVATN 320
A + AT+
Sbjct: 303 DALVCATD 310
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Specifically catalyzes the removal of N-terminal proline residues from peptides. Xylella fastidiosa (taxid: 2371) EC: 3 EC: . EC: 4 EC: . EC: 1 EC: 1 EC: . EC: 5 |
| >sp|O32449|PIP_SERMA Proline iminopeptidase OS=Serratia marcescens GN=pip PE=1 SV=1 | Back alignment and function description |
|---|
Score = 355 bits (910), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 164/310 (52%), Positives = 216/310 (69%), Gaps = 1/310 (0%)
Query: 14 NLYPYVEPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYR 73
LYP + Y +G L D H IYWE SGNP G P VF+HGGPGGG +P +R+ FDP+ Y+
Sbjct: 6 GLYPPLAAYDSGWLDTGDGHRIYWELSGNPNGKPAVFIHGGPGGGISPHHRQLFDPERYK 65
Query: 74 IILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLA 133
++LFDQRG G+S PHA LD NTTW L+ DIE+LR+ + +W VFGGSWGSTLALAY+
Sbjct: 66 VLLFDQRGCGRSRPHASLDNNTTWHLVADIERLREMAGVEQWLVFGGSWGSTLALAYAQT 125
Query: 134 HPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRL 193
HP++V+ +VLRGIF LRK+ + W+Y+ GA+ +P+ WE ++ ++ER + AY +RL
Sbjct: 126 HPERVSEMVLRGIFTLRKQRLHWYYQDGASRFFPEKWERVLSILSDDERKDVIAAYRQRL 185
Query: 194 NSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPS 253
S D + Q AA+ W+ WE T LLP+ E+ GEDD F+LAFARIENHYF + GF S
Sbjct: 186 TSADPQVQLEAAKLWSVWEGETVTLLPSRESASFGEDD-FALAFARIENHYFTHLGFLES 244
Query: 254 DSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIA 313
D LL N+ IRHI A IV GRYD+ C + +AWDL KAWPEA+ +V AGHS +EPGI
Sbjct: 245 DDQLLRNVPLIRHIPAVIVHGRYDMACQVQNAWDLAKAWPEAELHIVEGAGHSYDEPGIL 304
Query: 314 AELVATNEKL 323
+L+ ++
Sbjct: 305 HQLMIATDRF 314
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Specifically catalyzes the removal of N-terminal proline residues from peptides. Serratia marcescens (taxid: 615) EC: 3 EC: . EC: 4 EC: . EC: 1 EC: 1 EC: . EC: 5 |
| >sp|P52279|PIP_XANCI Proline iminopeptidase OS=Xanthomonas campestris pv. citri GN=pip PE=1 SV=2 | Back alignment and function description |
|---|
Score = 352 bits (902), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 172/308 (55%), Positives = 213/308 (69%)
Query: 14 NLYPYVEPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYR 73
LYP + PY G LKV D HT+Y+EQ GNP G PVV LHGGPGGG RRF DP YR
Sbjct: 3 TLYPEITPYQQGSLKVDDRHTLYFEQCGNPHGKPVVMLHGGPGGGCNDKMRRFHDPAKYR 62
Query: 74 IILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLA 133
I+LFDQRG+G+STPHA L NTTWDL+ DIE+LR HL + WQVFGGSWGSTLALAY+
Sbjct: 63 IVLFDQRGSGRSTPHADLVDNTTWDLVADIERLRTHLGVDRWQVFGGSWGSTLALAYAAD 122
Query: 134 HPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRL 193
LVLRGIFLLR+ E++WFY+ GA+ ++PDAWE + + IP ER+ + A+ +RL
Sbjct: 123 PSAAGHQLVLRGIFLLRRFELEWFYQEGASRLFPDAWEHYLNAIPPVERADLMSAFHRRL 182
Query: 194 NSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPS 253
SDD+ T+ AAA+AW+ WE T+ L +E+ + ED F+LAFARIENHYF+N GFF
Sbjct: 183 TSDDEATRLAAAKAWSVWEGATSFLHVDEDFVTGHEDAHFALAFARIENHYFVNGGFFEV 242
Query: 254 DSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIA 313
+ LL + I I IV GRYDV CP+ SAWDLHKAWP+A ++ +GHSA EP
Sbjct: 243 EDQLLRDAHRIADIPGVIVHGRYDVVCPLQSAWDLHKAWPKAQLQISPASGHSAFEPENV 302
Query: 314 AELVATNE 321
LV +
Sbjct: 303 DALVRATD 310
|
May be involved in proline metabolism and sensitivity to ascamycin. Has ascamycin dealanylating activity. Xanthomonas campestris pv. citri (taxid: 346) EC: 3 EC: . EC: 4 EC: . EC: 1 EC: 1 EC: . EC: 5 |
| >sp|P42786|PIP_NEIGO Proline iminopeptidase OS=Neisseria gonorrhoeae GN=pip PE=1 SV=1 | Back alignment and function description |
|---|
Score = 332 bits (852), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 162/310 (52%), Positives = 209/310 (67%), Gaps = 6/310 (1%)
Query: 15 LYPYVEPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRI 74
+Y +P+ +G L+VS+IH IYWE+SGNP G PV+FLHGGPG G +P R FF+PD +RI
Sbjct: 1 MYEIKQPFHSGYLQVSEIHQIYWEESGNPDGVPVIFLHGGPGAGASPECRGFFNPDVFRI 60
Query: 75 ILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAH 134
++ DQRG G+S P+AC + NTTWDL+ DIEK+R+ L I +W VFGGSWGSTL+LAY+ H
Sbjct: 61 VIIDQRGCGRSHPYACAEDNTTWDLVADIEKVREMLGIGKWLVFGGSWGSTLSLAYAQTH 120
Query: 135 PDKVTGLVLRGIFLLRKKEIDWFYE-GGAAAIYPDAWESFRDLIPENERSCFVDAYSKRL 193
P++V GLVLRGIFL R E W E GG + IYP+ W+ F I EN R+ ++AY L
Sbjct: 121 PERVKGLVLRGIFLCRPSETAWLNEAGGVSRIYPEQWQKFVAPIAENRRNRLIEAYHGLL 180
Query: 194 NSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPS 253
D+E +AA+AW WE P + ED SLA AR+ENHYF+N G+
Sbjct: 181 FHQDEEVCLSAAKAWADWESYLIRFEPEGVD----EDAYASLAIARLENHYFVNGGWLQG 236
Query: 254 DSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIA 313
D +L+NI IRHI IVQGRYD+C PM SAW+L KA+PEA+ +VV AGH A +P +A
Sbjct: 237 DKAILNNIGKIRHIPTVIVQGRYDLCTPMQSAWELSKAFPEAELRVV-QAGHCAFDPPLA 295
Query: 314 AELVATNEKL 323
LV E +
Sbjct: 296 DALVQAVEDI 305
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Hydrolyzes peptides having the structure Pro-Y-Z to yield free proline. Also hydrolyzes the dipeptide Pro-Gly. Neisseria gonorrhoeae (taxid: 485) EC: 3 EC: . EC: 4 EC: . EC: 1 EC: 1 EC: . EC: 5 |
| >sp|Q9JZR6|PIP_NEIMB Proline iminopeptidase OS=Neisseria meningitidis serogroup B (strain MC58) GN=pip PE=3 SV=1 | Back alignment and function description |
|---|
Score = 332 bits (850), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 162/310 (52%), Positives = 208/310 (67%), Gaps = 6/310 (1%)
Query: 15 LYPYVEPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRI 74
+Y +P+ +G L+VS+IH IYWE+SGNP G PV+FLHGGPG G +P R FF+PD +RI
Sbjct: 1 MYEIKQPFHSGYLQVSEIHQIYWEESGNPDGVPVIFLHGGPGAGASPECRGFFNPDVFRI 60
Query: 75 ILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAH 134
++ DQRG G+S P+AC + NTTWDL+ DIEK+R+ L I +W VFGGSWGSTL+LAY+ H
Sbjct: 61 VIIDQRGCGRSRPYACAEDNTTWDLVADIEKVREMLGIGKWLVFGGSWGSTLSLAYAQTH 120
Query: 135 PDKVTGLVLRGIFLLRKKEIDWFYE-GGAAAIYPDAWESFRDLIPENERSCFVDAYSKRL 193
P++V GLVLRGIFL R E W E GG + IYP+ W+ F I EN R+ ++AY L
Sbjct: 121 PERVKGLVLRGIFLCRPSETVWLNEAGGVSRIYPEQWQKFVAPIAENRRNRLIEAYHGLL 180
Query: 194 NSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPS 253
D+E +AA+AW WE P E + ED SLA AR+ENHYF+N G+
Sbjct: 181 FHQDEEVCLSAAKAWADWESYLIRFEPEEVD----EDAYASLAIARLENHYFVNGGWLQG 236
Query: 254 DSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIA 313
D +L+NI IRHI IVQGRYD+C PM SAW L KA+PEA+ +VV AGH A +P +
Sbjct: 237 DRAILNNIGKIRHIPTIIVQGRYDLCTPMQSAWALSKAFPEAELRVV-QAGHRAFDPPLV 295
Query: 314 AELVATNEKL 323
LV E +
Sbjct: 296 DALVQAVEDI 305
|
Specifically catalyzes the removal of N-terminal proline residues from peptides. Neisseria meningitidis serogroup B (strain MC58) (taxid: 122586) EC: 3 EC: . EC: 4 EC: . EC: 1 EC: 1 EC: . EC: 5 |
| >sp|Q9JUV1|PIP_NEIMA Proline iminopeptidase OS=Neisseria meningitidis serogroup A / serotype 4A (strain Z2491) GN=pip PE=3 SV=1 | Back alignment and function description |
|---|
Score = 330 bits (846), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 161/310 (51%), Positives = 208/310 (67%), Gaps = 6/310 (1%)
Query: 15 LYPYVEPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRI 74
+Y +P+ +G L+VS+IH IYWE+SGNP G PV+FLHGGPG G +P R FF+PD +RI
Sbjct: 1 MYEIKQPFHSGYLQVSEIHQIYWEESGNPDGVPVIFLHGGPGAGASPECRGFFNPDVFRI 60
Query: 75 ILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAH 134
++ DQRG G+S P+AC + NTTWDL+ DIEK+R+ L I +W VFGGSWGSTL+LAY+ H
Sbjct: 61 VIIDQRGCGRSRPYACAEDNTTWDLVADIEKVREMLGIGKWLVFGGSWGSTLSLAYAQTH 120
Query: 135 PDKVTGLVLRGIFLLRKKEIDWFYE-GGAAAIYPDAWESFRDLIPENERSCFVDAYSKRL 193
P++V GLVLRGIFL R E W E GG + IYP+ W+ F I EN R+ ++AY L
Sbjct: 121 PERVKGLVLRGIFLCRPSETVWLNEAGGVSRIYPEQWQKFVAPIAENRRNQLIEAYHGLL 180
Query: 194 NSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPS 253
D+E +AA+AW WE P E + ED SLA AR+ENHYF+N G+
Sbjct: 181 FHQDEEVCLSAAKAWADWESYLIRFEPEEVD----EDAYASLAIARLENHYFVNGGWLQG 236
Query: 254 DSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIA 313
D +L+NI I+HI IVQGRYD+C PM SAW L KA+PEA+ +VV AGH A +P +
Sbjct: 237 DRAILNNIGKIQHIPTIIVQGRYDLCTPMQSAWALSKAFPEAELRVV-QAGHRAFDPPLV 295
Query: 314 AELVATNEKL 323
LV E +
Sbjct: 296 DALVQAVEDI 305
|
Specifically catalyzes the removal of N-terminal proline residues from peptides. Neisseria meningitidis serogroup A / serotype 4A (strain Z2491) (taxid: 122587) EC: 3 EC: . EC: 4 EC: . EC: 1 EC: 1 EC: . EC: 5 |
| >sp|Q9S2L4|PIP_STRCO Probable proline iminopeptidase OS=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) GN=SCO1989 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 228 bits (580), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 130/321 (40%), Positives = 174/321 (54%), Gaps = 12/321 (3%)
Query: 14 NLYPYVEPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYR 73
+LYP +EPY G+L V D + +YWE GNP G P V LHGGPG +P RR+FDP YR
Sbjct: 2 SLYPEIEPYDHGMLDVGDGNHVYWETCGNPHGKPAVVLHGGPGSRASPGLRRYFDPAAYR 61
Query: 74 IILFDQRGAGKSTPHAC-----LDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLAL 128
I+L DQRGAG+S P A + NTT L+ D+E+LR HL I W V+G SWGS L L
Sbjct: 62 IVLLDQRGAGRSLPRASAPDTDMSVNTTAHLMADLERLRVHLGIERWLVWGVSWGSVLGL 121
Query: 129 AYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSC-FVD 187
Y+ HP VT LVL G+ E+ G I+P+A E F +P + R
Sbjct: 122 RYAQTHPGVVTELVLTGVATGSNAEVALLTR-GLGNIFPEAHERFLAELPPDARDGNLPA 180
Query: 188 AYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLN 247
AY++ L S D + AARAWT WE T P ++ R +D F + FAR HY+ N
Sbjct: 181 AYNRLLESPDPAVRERAARAWTDWETATIPAPPG--SVARYQDPDFRMGFARTVTHYWGN 238
Query: 248 KGFFP---SDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAG 304
F + ++ + ++ I T+VQG D + W LH AWP++D +V +AG
Sbjct: 239 DHFLGDGNDEGVVIRDAHLLKGIPGTLVQGSLDFGNLLGIVWRLHHAWPDSDLVIVDEAG 298
Query: 305 HSANEPGIAAELVATNEKLKN 325
H A G A L AT++ +
Sbjct: 299 HDAGTTGDEALLAATDKYARG 319
|
Specifically catalyzes the removal of N-terminal proline residues from peptides. Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) (taxid: 100226) EC: 3 EC: . EC: 4 EC: . EC: 1 EC: 1 EC: . EC: 5 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 331 | ||||||
| 255562062 | 396 | proline iminopeptidase, putative [Ricinu | 0.996 | 0.833 | 0.881 | 1e-175 | |
| 224060965 | 330 | predicted protein [Populus trichocarpa] | 0.993 | 0.996 | 0.869 | 1e-172 | |
| 356554862 | 391 | PREDICTED: proline iminopeptidase-like [ | 0.993 | 0.841 | 0.872 | 1e-171 | |
| 359475506 | 391 | PREDICTED: proline iminopeptidase [Vitis | 0.993 | 0.841 | 0.869 | 1e-169 | |
| 297736351 | 390 | unnamed protein product [Vitis vinifera] | 0.993 | 0.843 | 0.869 | 1e-169 | |
| 357446139 | 400 | Proline iminopeptidase [Medicago truncat | 0.993 | 0.822 | 0.863 | 1e-168 | |
| 449459564 | 395 | PREDICTED: proline iminopeptidase-like [ | 0.996 | 0.835 | 0.873 | 1e-166 | |
| 449520052 | 395 | PREDICTED: proline iminopeptidase-like [ | 0.996 | 0.835 | 0.870 | 1e-165 | |
| 30679088 | 380 | proline iminopeptidase [Arabidopsis thal | 0.948 | 0.826 | 0.831 | 1e-158 | |
| 42570761 | 329 | proline iminopeptidase [Arabidopsis thal | 0.948 | 0.954 | 0.831 | 1e-157 |
| >gi|255562062|ref|XP_002522039.1| proline iminopeptidase, putative [Ricinus communis] gi|223538638|gb|EEF40239.1| proline iminopeptidase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 621 bits (1602), Expect = e-175, Method: Compositional matrix adjust.
Identities = 291/330 (88%), Positives = 309/330 (93%)
Query: 1 MMESGKELPELNTNLYPYVEPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTT 60
+ME KE ELN NLYP +EPY TG LKVSD+HT+Y+EQSGNP+GHPVVFLHGGPGGGT
Sbjct: 66 VMEQSKEKVELNRNLYPPIEPYDTGFLKVSDLHTLYYEQSGNPSGHPVVFLHGGPGGGTA 125
Query: 61 PSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGG 120
PSNRRFFDP+FYRIILFDQRGAGKSTPHACL NTTWDLI DIEKLR++L+IPEWQVFGG
Sbjct: 126 PSNRRFFDPEFYRIILFDQRGAGKSTPHACLVDNTTWDLISDIEKLREYLQIPEWQVFGG 185
Query: 121 SWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPEN 180
SWGSTLALAYS AHP+KVTGLVLRGIFLLRKKEIDWFYEG AAAIYPDAWE FRDLIPEN
Sbjct: 186 SWGSTLALAYSQAHPNKVTGLVLRGIFLLRKKEIDWFYEGAAAAIYPDAWEPFRDLIPEN 245
Query: 181 ERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARI 240
ER CF+DAYSKRLNSDD ETQ+AAARAWTKWEMMTAHLLPNEENIKRG+DD FSLAFARI
Sbjct: 246 ERGCFLDAYSKRLNSDDMETQFAAARAWTKWEMMTAHLLPNEENIKRGDDDNFSLAFARI 305
Query: 241 ENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVV 300
ENHYF+NKGFFPSDSFLLDN+D IRHI+ATIVQGRYDVCCPMMSAWDLHKAWPEAD KVV
Sbjct: 306 ENHYFVNKGFFPSDSFLLDNVDKIRHIHATIVQGRYDVCCPMMSAWDLHKAWPEADLKVV 365
Query: 301 ADAGHSANEPGIAAELVATNEKLKNLIKNG 330
ADAGHSANEPGIAAELVA NEKLKN+IKNG
Sbjct: 366 ADAGHSANEPGIAAELVAANEKLKNIIKNG 395
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224060965|ref|XP_002300298.1| predicted protein [Populus trichocarpa] gi|222847556|gb|EEE85103.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 612 bits (1577), Expect = e-172, Method: Compositional matrix adjust.
Identities = 286/329 (86%), Positives = 307/329 (93%)
Query: 2 MESGKELPELNTNLYPYVEPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTP 61
ME KE ELN NLY +EPY TG LKVSD+H+IY+EQSG+P+GHPVVFLHGGPGGGT P
Sbjct: 1 MEPVKESVELNRNLYANIEPYETGFLKVSDLHSIYYEQSGSPSGHPVVFLHGGPGGGTAP 60
Query: 62 SNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGS 121
SNRRFFDP+FYRIILFDQRGAGKSTPHA L++NTTWDLIDDIEKLR+HL+IPEWQVFGGS
Sbjct: 61 SNRRFFDPEFYRIILFDQRGAGKSTPHASLEENTTWDLIDDIEKLREHLKIPEWQVFGGS 120
Query: 122 WGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENE 181
WGSTLALAYS +HP+KVTGLVLRGIFLLRKKEIDWFYEGGAAAI+PDAWESFRD IPENE
Sbjct: 121 WGSTLALAYSQSHPEKVTGLVLRGIFLLRKKEIDWFYEGGAAAIFPDAWESFRDFIPENE 180
Query: 182 RSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIE 241
R CF+DAYSKRLNSDD ETQYAAARAWTKWEMMTAHLLPNEE +KRG+DDIFSLAFARIE
Sbjct: 181 RGCFIDAYSKRLNSDDLETQYAAARAWTKWEMMTAHLLPNEETVKRGDDDIFSLAFARIE 240
Query: 242 NHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVA 301
NHYF+NKGFFPSDSFLL+N+D IRHIN TIVQGRYDVCCPMMSAWDLHKAWPEAD KVV
Sbjct: 241 NHYFVNKGFFPSDSFLLENVDKIRHINTTIVQGRYDVCCPMMSAWDLHKAWPEADLKVVP 300
Query: 302 DAGHSANEPGIAAELVATNEKLKNLIKNG 330
DAGHSANEPGI AELVA NEKLKN+IKNG
Sbjct: 301 DAGHSANEPGITAELVAANEKLKNIIKNG 329
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356554862|ref|XP_003545761.1| PREDICTED: proline iminopeptidase-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 605 bits (1560), Expect = e-171, Method: Compositional matrix adjust.
Identities = 287/329 (87%), Positives = 309/329 (93%)
Query: 1 MMESGKELPELNTNLYPYVEPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTT 60
+M S E ELN NLYP +EPYSTG LKVSD+HTIYWEQSGNP+GHPVVF+HGGPGGGT+
Sbjct: 60 LMASENEFSELNRNLYPQIEPYSTGFLKVSDLHTIYWEQSGNPSGHPVVFIHGGPGGGTS 119
Query: 61 PSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGG 120
PSNR+FFDPDFYRI+LFDQR AGKSTPHACL+QNTTWDLIDDIEKLR+HLEIPEWQVFGG
Sbjct: 120 PSNRKFFDPDFYRIVLFDQRSAGKSTPHACLEQNTTWDLIDDIEKLREHLEIPEWQVFGG 179
Query: 121 SWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPEN 180
SWGSTLALAYS +HPDKVTG++LRGIFLLRKKEIDWFYEGGAAAI+PDAWE FRDLIPE+
Sbjct: 180 SWGSTLALAYSQSHPDKVTGMILRGIFLLRKKEIDWFYEGGAAAIFPDAWEPFRDLIPES 239
Query: 181 ERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARI 240
ER CFVDAY+KRLNSDD +TQYAAARAWTKWEMMTAHLLPNEENIK+G+DD FSLAFARI
Sbjct: 240 ERGCFVDAYNKRLNSDDIKTQYAAARAWTKWEMMTAHLLPNEENIKKGDDDYFSLAFARI 299
Query: 241 ENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVV 300
ENHYF+NKGFFPSDSFLLD ID IRHIN TIVQGRYDVCCPMMSAWDLHKAWPEADF+VV
Sbjct: 300 ENHYFVNKGFFPSDSFLLDRIDKIRHINTTIVQGRYDVCCPMMSAWDLHKAWPEADFRVV 359
Query: 301 ADAGHSANEPGIAAELVATNEKLKNLIKN 329
DAGHSANEPGI AELVA NEKLKN+IKN
Sbjct: 360 PDAGHSANEPGITAELVAANEKLKNIIKN 388
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359475506|ref|XP_002271289.2| PREDICTED: proline iminopeptidase [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 601 bits (1550), Expect = e-169, Method: Compositional matrix adjust.
Identities = 286/329 (86%), Positives = 310/329 (94%)
Query: 2 MESGKELPELNTNLYPYVEPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTP 61
M+ GKE+PELN NLYP +EPYS+G LKVSD+H+IYWEQSGNP GHPVVF+HGGPGGGT+P
Sbjct: 61 MDLGKEVPELNRNLYPPIEPYSSGFLKVSDLHSIYWEQSGNPNGHPVVFIHGGPGGGTSP 120
Query: 62 SNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGS 121
SNR FFDPDFYRIILFDQRGAGKSTPHACL NTTWDL++DIEKLR+HLEIPEWQVFGGS
Sbjct: 121 SNRTFFDPDFYRIILFDQRGAGKSTPHACLVDNTTWDLVNDIEKLREHLEIPEWQVFGGS 180
Query: 122 WGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENE 181
WGSTLALAYS +HPDKVTG+VLRGIFLLRKKE+DWFYEGGAAAIYPDAWE FRDLIPENE
Sbjct: 181 WGSTLALAYSQSHPDKVTGMVLRGIFLLRKKELDWFYEGGAAAIYPDAWEPFRDLIPENE 240
Query: 182 RSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIE 241
R C +DAY KRLNSDD ETQYAAARAWTKWEMMTAHLLPNEENIK+G+DD FSLAFARIE
Sbjct: 241 RDCLIDAYHKRLNSDDMETQYAAARAWTKWEMMTAHLLPNEENIKKGDDDKFSLAFARIE 300
Query: 242 NHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVA 301
NHYF+NKGFFPSDSFLLDNI+ IRHINATIVQGRYD+CCP+M+AWDLHKAWPEADFK+V
Sbjct: 301 NHYFVNKGFFPSDSFLLDNIEKIRHINATIVQGRYDMCCPIMTAWDLHKAWPEADFKIVP 360
Query: 302 DAGHSANEPGIAAELVATNEKLKNLIKNG 330
DAGHSANE GIAAELVA NEKLKN+IKNG
Sbjct: 361 DAGHSANELGIAAELVAANEKLKNIIKNG 389
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297736351|emb|CBI25074.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 601 bits (1549), Expect = e-169, Method: Compositional matrix adjust.
Identities = 286/329 (86%), Positives = 310/329 (94%)
Query: 2 MESGKELPELNTNLYPYVEPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTP 61
M+ GKE+PELN NLYP +EPYS+G LKVSD+H+IYWEQSGNP GHPVVF+HGGPGGGT+P
Sbjct: 60 MDLGKEVPELNRNLYPPIEPYSSGFLKVSDLHSIYWEQSGNPNGHPVVFIHGGPGGGTSP 119
Query: 62 SNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGS 121
SNR FFDPDFYRIILFDQRGAGKSTPHACL NTTWDL++DIEKLR+HLEIPEWQVFGGS
Sbjct: 120 SNRTFFDPDFYRIILFDQRGAGKSTPHACLVDNTTWDLVNDIEKLREHLEIPEWQVFGGS 179
Query: 122 WGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENE 181
WGSTLALAYS +HPDKVTG+VLRGIFLLRKKE+DWFYEGGAAAIYPDAWE FRDLIPENE
Sbjct: 180 WGSTLALAYSQSHPDKVTGMVLRGIFLLRKKELDWFYEGGAAAIYPDAWEPFRDLIPENE 239
Query: 182 RSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIE 241
R C +DAY KRLNSDD ETQYAAARAWTKWEMMTAHLLPNEENIK+G+DD FSLAFARIE
Sbjct: 240 RDCLIDAYHKRLNSDDMETQYAAARAWTKWEMMTAHLLPNEENIKKGDDDKFSLAFARIE 299
Query: 242 NHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVA 301
NHYF+NKGFFPSDSFLLDNI+ IRHINATIVQGRYD+CCP+M+AWDLHKAWPEADFK+V
Sbjct: 300 NHYFVNKGFFPSDSFLLDNIEKIRHINATIVQGRYDMCCPIMTAWDLHKAWPEADFKIVP 359
Query: 302 DAGHSANEPGIAAELVATNEKLKNLIKNG 330
DAGHSANE GIAAELVA NEKLKN+IKNG
Sbjct: 360 DAGHSANELGIAAELVAANEKLKNIIKNG 388
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357446139|ref|XP_003593347.1| Proline iminopeptidase [Medicago truncatula] gi|355482395|gb|AES63598.1| Proline iminopeptidase [Medicago truncatula] gi|388509368|gb|AFK42750.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 598 bits (1542), Expect = e-168, Method: Compositional matrix adjust.
Identities = 284/329 (86%), Positives = 306/329 (93%)
Query: 1 MMESGKELPELNTNLYPYVEPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTT 60
M +E+ +NTNLYP +EPY+TG LKVSD+HTIYWEQSGNPTGHPVVFLHGGPGGGT+
Sbjct: 69 MASQKEEISPVNTNLYPDIEPYTTGFLKVSDLHTIYWEQSGNPTGHPVVFLHGGPGGGTS 128
Query: 61 PSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGG 120
PSNRRFFDP+FYRIILFDQRGAGKSTPHACL+ NTTWDLIDDIEKLR+HL+IPEWQVFGG
Sbjct: 129 PSNRRFFDPEFYRIILFDQRGAGKSTPHACLEHNTTWDLIDDIEKLREHLQIPEWQVFGG 188
Query: 121 SWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPEN 180
SWGSTLALAYS +HPDKVTG+VLRGIFLLRKKEIDWFYEGGAAAIYPDAWE FRDLIPE
Sbjct: 189 SWGSTLALAYSQSHPDKVTGIVLRGIFLLRKKEIDWFYEGGAAAIYPDAWEPFRDLIPEK 248
Query: 181 ERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARI 240
ER CF+DAY KRLNSDD +TQYAAARAWTKWEMMTAHLLPNE+ +KRG+DD FSLAFARI
Sbjct: 249 ERGCFIDAYKKRLNSDDIKTQYAAARAWTKWEMMTAHLLPNEDMVKRGDDDYFSLAFARI 308
Query: 241 ENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVV 300
ENHYF+NKGFF SDSFLLD +D IRHIN TIVQGRYDVCCPMMSAWDLHKAWPEADF+VV
Sbjct: 309 ENHYFVNKGFFSSDSFLLDGVDKIRHINTTIVQGRYDVCCPMMSAWDLHKAWPEADFRVV 368
Query: 301 ADAGHSANEPGIAAELVATNEKLKNLIKN 329
+DAGHSANEPGIAAELVA NEKLKN IKN
Sbjct: 369 SDAGHSANEPGIAAELVAANEKLKNKIKN 397
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449459564|ref|XP_004147516.1| PREDICTED: proline iminopeptidase-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 590 bits (1522), Expect = e-166, Method: Compositional matrix adjust.
Identities = 289/331 (87%), Positives = 307/331 (92%), Gaps = 1/331 (0%)
Query: 1 MMESGKELPELNTNLYPYVEPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTT 60
+M KE+ + N YP +EPYSTG LKVSD+HTIYWEQSGNPTGHPVVFLHGGPGGGT
Sbjct: 64 LMAGEKEISGIYRNPYPPIEPYSTGFLKVSDLHTIYWEQSGNPTGHPVVFLHGGPGGGTA 123
Query: 61 PSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGG 120
P NRRFFDPDFYRIILFDQRGAGKSTPHACL+ NTTW+LIDDIEKLR+HLEIPEWQVFGG
Sbjct: 124 PGNRRFFDPDFYRIILFDQRGAGKSTPHACLEDNTTWNLIDDIEKLREHLEIPEWQVFGG 183
Query: 121 SWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPEN 180
SWGSTLALAYS +HP+KVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPE+
Sbjct: 184 SWGSTLALAYSQSHPEKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPES 243
Query: 181 ERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARI 240
ER CFVDAYSKRLNS D ETQYAAARAWTKWEMMTAHLLPNEENIKRGEDD FSLAFARI
Sbjct: 244 ERGCFVDAYSKRLNSKDMETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDNFSLAFARI 303
Query: 241 ENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVV 300
ENHYF+NKGFFPSDSFLLDNID IRHINA IVQGRYDVCCPMMSAWDLHK WPEA+ K++
Sbjct: 304 ENHYFVNKGFFPSDSFLLDNIDKIRHINAVIVQGRYDVCCPMMSAWDLHKVWPEAELKII 363
Query: 301 ADAGHSANEPGIAAELVATNEKLKNLI-KNG 330
+DAGHSANEPGIAAELVA NEKLKN++ KNG
Sbjct: 364 SDAGHSANEPGIAAELVAANEKLKNILQKNG 394
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449520052|ref|XP_004167048.1| PREDICTED: proline iminopeptidase-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 588 bits (1515), Expect = e-165, Method: Compositional matrix adjust.
Identities = 288/331 (87%), Positives = 306/331 (92%), Gaps = 1/331 (0%)
Query: 1 MMESGKELPELNTNLYPYVEPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTT 60
+M KE+ + N YP +EPYSTG LKVSD+HTIYWEQSGNPTGHPVVFLHGGPGGGT
Sbjct: 64 LMAGEKEISGIYRNPYPPIEPYSTGFLKVSDLHTIYWEQSGNPTGHPVVFLHGGPGGGTA 123
Query: 61 PSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGG 120
P NRRFFDPDFYRIILFDQRGAGKSTPHACL+ NTTW+LIDDIEKLR+HLEIPEWQVFGG
Sbjct: 124 PGNRRFFDPDFYRIILFDQRGAGKSTPHACLEDNTTWNLIDDIEKLREHLEIPEWQVFGG 183
Query: 121 SWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPEN 180
SWGSTLALAYS +HP+KVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPE+
Sbjct: 184 SWGSTLALAYSQSHPEKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPES 243
Query: 181 ERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARI 240
ER CFVDAYSKRLNS D ETQYAAARAWTKWEMMTAHLLPNEENIKRGEDD FSLAFARI
Sbjct: 244 ERGCFVDAYSKRLNSKDMETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDNFSLAFARI 303
Query: 241 ENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVV 300
ENHYF+NKGFFPSDSFLLDNID IR INA IVQGRYDVCCPMMSAWDLHK WPEA+ K++
Sbjct: 304 ENHYFVNKGFFPSDSFLLDNIDKIRRINAVIVQGRYDVCCPMMSAWDLHKVWPEAELKII 363
Query: 301 ADAGHSANEPGIAAELVATNEKLKNLI-KNG 330
+DAGHSANEPGIAAELVA NEKLKN++ KNG
Sbjct: 364 SDAGHSANEPGIAAELVAANEKLKNILQKNG 394
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|30679088|ref|NP_179037.2| proline iminopeptidase [Arabidopsis thaliana] gi|148880081|sp|P93732.3|PIP_ARATH RecName: Full=Proline iminopeptidase; Short=PIP; AltName: Full=Prolyl aminopeptidase; Short=PAP gi|16649093|gb|AAL24398.1| proline iminopeptidase [Arabidopsis thaliana] gi|21387211|gb|AAM48009.1| proline iminopeptidase [Arabidopsis thaliana] gi|330251199|gb|AEC06293.1| proline iminopeptidase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 562 bits (1448), Expect = e-158, Method: Compositional matrix adjust.
Identities = 262/315 (83%), Positives = 286/315 (90%), Gaps = 1/315 (0%)
Query: 14 NLYPYVEPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYR 73
LY +EPYS+G LKVSD+HT+YWEQSG P GHPVVFLHGGPGGGT PSNRRFFDP+FYR
Sbjct: 65 TLYAPIEPYSSGNLKVSDVHTLYWEQSGKPDGHPVVFLHGGPGGGTAPSNRRFFDPEFYR 124
Query: 74 IILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLA 133
I+LFDQRGAGKSTPHACL++NTTWDL++DIEKLR+HL+IPEW VFGGSWGSTLALAYS +
Sbjct: 125 IVLFDQRGAGKSTPHACLEENTTWDLVNDIEKLREHLKIPEWLVFGGSWGSTLALAYSQS 184
Query: 134 HPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENER-SCFVDAYSKR 192
HPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWE FRDLIPENER S VDAY KR
Sbjct: 185 HPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWEEFRDLIPENERGSSLVDAYHKR 244
Query: 193 LNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFP 252
LNSDD E QYAAARAWTKWEMMTA+L PN EN+++ EDD FSLAFARIENHYF+NKGFFP
Sbjct: 245 LNSDDLEIQYAAARAWTKWEMMTAYLRPNLENVQKAEDDKFSLAFARIENHYFVNKGFFP 304
Query: 253 SDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGI 312
SDS LLDN+D IRHI TIVQGRYDVCCPMMSAWDLHKAWPEA+ K+V DAGHSANEPGI
Sbjct: 305 SDSHLLDNVDKIRHIKTTIVQGRYDVCCPMMSAWDLHKAWPEAELKIVYDAGHSANEPGI 364
Query: 313 AAELVATNEKLKNLI 327
+AELV NEK+K L+
Sbjct: 365 SAELVVANEKMKALM 379
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|42570761|ref|NP_973454.1| proline iminopeptidase [Arabidopsis thaliana] gi|4406804|gb|AAD20113.1| proline iminopeptidase [Arabidopsis thaliana] gi|330251200|gb|AEC06294.1| proline iminopeptidase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 562 bits (1448), Expect = e-157, Method: Compositional matrix adjust.
Identities = 262/315 (83%), Positives = 286/315 (90%), Gaps = 1/315 (0%)
Query: 14 NLYPYVEPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYR 73
LY +EPYS+G LKVSD+HT+YWEQSG P GHPVVFLHGGPGGGT PSNRRFFDP+FYR
Sbjct: 14 TLYAPIEPYSSGNLKVSDVHTLYWEQSGKPDGHPVVFLHGGPGGGTAPSNRRFFDPEFYR 73
Query: 74 IILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLA 133
I+LFDQRGAGKSTPHACL++NTTWDL++DIEKLR+HL+IPEW VFGGSWGSTLALAYS +
Sbjct: 74 IVLFDQRGAGKSTPHACLEENTTWDLVNDIEKLREHLKIPEWLVFGGSWGSTLALAYSQS 133
Query: 134 HPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENER-SCFVDAYSKR 192
HPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWE FRDLIPENER S VDAY KR
Sbjct: 134 HPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWEEFRDLIPENERGSSLVDAYHKR 193
Query: 193 LNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFP 252
LNSDD E QYAAARAWTKWEMMTA+L PN EN+++ EDD FSLAFARIENHYF+NKGFFP
Sbjct: 194 LNSDDLEIQYAAARAWTKWEMMTAYLRPNLENVQKAEDDKFSLAFARIENHYFVNKGFFP 253
Query: 253 SDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGI 312
SDS LLDN+D IRHI TIVQGRYDVCCPMMSAWDLHKAWPEA+ K+V DAGHSANEPGI
Sbjct: 254 SDSHLLDNVDKIRHIKTTIVQGRYDVCCPMMSAWDLHKAWPEAELKIVYDAGHSANEPGI 313
Query: 313 AAELVATNEKLKNLI 327
+AELV NEK+K L+
Sbjct: 314 SAELVVANEKMKALM 328
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 331 | ||||||
| TAIR|locus:2058083 | 380 | PIP "proline iminopeptidase" [ | 0.945 | 0.823 | 0.834 | 3e-149 | |
| DICTYBASE|DDB_G0287013 | 341 | DDB_G0287013 [Dictyostelium di | 0.945 | 0.917 | 0.547 | 3e-92 | |
| TIGR_CMR|SPO_0066 | 316 | SPO_0066 "proline iminopeptida | 0.909 | 0.952 | 0.537 | 3.2e-88 | |
| TIGR_CMR|CPS_3964 | 318 | CPS_3964 "proline iminopeptida | 0.936 | 0.974 | 0.445 | 3.2e-72 | |
| TIGR_CMR|CPS_0863 | 318 | CPS_0863 "proline iminopeptida | 0.945 | 0.984 | 0.415 | 8.8e-63 | |
| TIGR_CMR|SO_4400 | 318 | SO_4400 "proline iminopeptidas | 0.858 | 0.893 | 0.353 | 3e-37 | |
| UNIPROTKB|Q81R41 | 303 | BA_2217 "Alpha/beta hydrolase | 0.326 | 0.356 | 0.336 | 6.1e-10 | |
| TIGR_CMR|BA_2217 | 303 | BA_2217 "hydrolase, alpha/beta | 0.326 | 0.356 | 0.336 | 6.1e-10 | |
| UNIPROTKB|Q81N74 | 300 | BAS3098 "Hydrolase, alpha/beta | 0.353 | 0.39 | 0.259 | 1.6e-07 | |
| TIGR_CMR|BA_3343 | 300 | BA_3343 "hydrolase, alpha/beta | 0.353 | 0.39 | 0.259 | 1.6e-07 |
| TAIR|locus:2058083 PIP "proline iminopeptidase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1457 (517.9 bits), Expect = 3.0e-149, P = 3.0e-149
Identities = 262/314 (83%), Positives = 286/314 (91%)
Query: 15 LYPYVEPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRI 74
LY +EPYS+G LKVSD+HT+YWEQSG P GHPVVFLHGGPGGGT PSNRRFFDP+FYRI
Sbjct: 66 LYAPIEPYSSGNLKVSDVHTLYWEQSGKPDGHPVVFLHGGPGGGTAPSNRRFFDPEFYRI 125
Query: 75 ILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAH 134
+LFDQRGAGKSTPHACL++NTTWDL++DIEKLR+HL+IPEW VFGGSWGSTLALAYS +H
Sbjct: 126 VLFDQRGAGKSTPHACLEENTTWDLVNDIEKLREHLKIPEWLVFGGSWGSTLALAYSQSH 185
Query: 135 PDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENER-SCFVDAYSKRL 193
PDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWE FRDLIPENER S VDAY KRL
Sbjct: 186 PDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWEEFRDLIPENERGSSLVDAYHKRL 245
Query: 194 NSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPS 253
NSDD E QYAAARAWTKWEMMTA+L PN EN+++ EDD FSLAFARIENHYF+NKGFFPS
Sbjct: 246 NSDDLEIQYAAARAWTKWEMMTAYLRPNLENVQKAEDDKFSLAFARIENHYFVNKGFFPS 305
Query: 254 DSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIA 313
DS LLDN+D IRHI TIVQGRYDVCCPMMSAWDLHKAWPEA+ K+V DAGHSANEPGI+
Sbjct: 306 DSHLLDNVDKIRHIKTTIVQGRYDVCCPMMSAWDLHKAWPEAELKIVYDAGHSANEPGIS 365
Query: 314 AELVATNEKLKNLI 327
AELV NEK+K L+
Sbjct: 366 AELVVANEKMKALM 379
|
|
| DICTYBASE|DDB_G0287013 DDB_G0287013 [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 919 (328.6 bits), Expect = 3.0e-92, P = 3.0e-92
Identities = 172/314 (54%), Positives = 221/314 (70%)
Query: 14 NLYPYVEPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYR 73
+LYP +E Y LKVSDIH IY E+SGNPTG PV+ LHGGPGGG+ P R++FDP YR
Sbjct: 28 SLYPPIEAYKVQKLKVSDIHEIYIEESGNPTGKPVIVLHGGPGGGSEPMYRQYFDPVVYR 87
Query: 74 IILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLA 133
II FDQRG GKSTP ACL+ N TW L++DIEK+R L I W VFGGSWGSTL+LAY+
Sbjct: 88 IIQFDQRGCGKSTPFACLEDNNTWALVEDIEKIRVLLGIDNWVVFGGSWGSTLSLAYAET 147
Query: 134 HPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRL 193
HP +V LVLRGIF LR++E+ +FY+ GA+ ++ D ++ + IP ER + AY +RL
Sbjct: 148 HPSRVKALVLRGIFTLRREELIFFYQTGASFLFADYFDEYLKPIPPAERGDIISAYHRRL 207
Query: 194 NSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPS 253
D++ + AA AWT WEM T+ L+ ++ I RGED +F+LAFARIENHYF+N GFF
Sbjct: 208 TGTDEKIKQEAANAWTTWEMATSRLMVDKHKIARGEDPMFALAFARIENHYFVNAGFFRE 267
Query: 254 DSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPE-ADFKVVADAGHSANEPGI 312
D L+++ +++I IVQGRYDV CPM SAWDL K W E AD ++ D+GHS +E GI
Sbjct: 268 DGQLINDAHILKNIPGVIVQGRYDVVCPMKSAWDLKKVWGENADLVIIPDSGHSCSENGI 327
Query: 313 AAELVATNEKLKNL 326
LV +K K+L
Sbjct: 328 IHSLVEACDKFKHL 341
|
|
| TIGR_CMR|SPO_0066 SPO_0066 "proline iminopeptidase" [Ruegeria pomeroyi DSS-3 (taxid:246200)] | Back alignment and assigned GO terms |
|---|
Score = 881 (315.2 bits), Expect = 3.2e-88, P = 3.2e-88
Identities = 163/303 (53%), Positives = 206/303 (67%)
Query: 15 LYPYVEPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRI 74
L+P +EP+ +L V H IY EQSGNP G PVV LHGGPGGG +P+ RR+FDP YR+
Sbjct: 4 LHPPIEPFDQRMLDVGQGHRIYVEQSGNPNGIPVVVLHGGPGGGCSPAMRRYFDPSVYRV 63
Query: 75 ILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAH 134
ILFDQRG G+S PHA + NTTW L+ DIE++R+ LEI W FGGSWG+TLAL Y+ H
Sbjct: 64 ILFDQRGCGRSRPHASVTDNTTWHLVADIERIRKTLEIDSWIAFGGSWGATLALIYAQTH 123
Query: 135 PDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLN 194
PD+VT LVLRG+FL+ + E+DWFY GGA +P+ W F LIPENER + AY KRL
Sbjct: 124 PDRVTHLVLRGVFLMTQAELDWFYGGGAGRFWPEPWSRFAALIPENERGDMIAAYHKRLF 183
Query: 195 SDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSD 254
S D + ARAW+ WE A + N + D ++ AFAR+ENHYF+N GF D
Sbjct: 184 SGDMAQEIRYARAWSAWENALASIQSNGTTGESPGD--YARAFARLENHYFINDGFLEFD 241
Query: 255 SFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAA 314
+L N+ I HI IVQGRYD+ CP SAW L + WP AD +++ +AGH+ +EPGI+A
Sbjct: 242 GQILANMGRISHIPGHIVQGRYDMICPPNSAWKLSELWPNADLRMIRNAGHALSEPGISA 301
Query: 315 ELV 317
ELV
Sbjct: 302 ELV 304
|
|
| TIGR_CMR|CPS_3964 CPS_3964 "proline iminopeptidase" [Colwellia psychrerythraea 34H (taxid:167879)] | Back alignment and assigned GO terms |
|---|
Score = 730 (262.0 bits), Expect = 3.2e-72, P = 3.2e-72
Identities = 139/312 (44%), Positives = 191/312 (61%)
Query: 16 YPYVEPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRII 75
YP + P++ +L V H IY EQ GNP G PV+F+HGGPGGG + ++RRFFDP+ Y II
Sbjct: 8 YPEISPFNDFLLDVDGQHRIYVEQCGNPKGQPVLFIHGGPGGGCSTNDRRFFDPEQYHII 67
Query: 76 LFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHP 135
LFDQRG G+S PH CLD N T L+ DIEK+RQHL I +W VFGGSWGSTL+L Y+ AHP
Sbjct: 68 LFDQRGCGRSLPHGCLDNNETNFLVADIEKIRQHLNIEQWHVFGGSWGSTLSLVYAEAHP 127
Query: 136 DKVTGLVLRGIFLLRKKEIDWFYEGGAAA-IYPDAWESFRDLIPENERSCFVDAYSKRLN 194
V LVLRGIFL R+ + +W + GG A I+PD W+ + D++P A + L
Sbjct: 128 VSVKSLVLRGIFLGREVDTNWTFSGGGATRIFPDYWQDYIDVLPLGREQATTKAAYEMLI 187
Query: 195 SDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSD 254
+DK A AW+ WE+ L+P++ + D + AR E H+ +N F +D
Sbjct: 188 GEDKALAQKIATAWSIWEIRCCTLIPDQAFVDAATGDDHAWTLARHEAHFMVNDCFL-TD 246
Query: 255 SFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAA 314
+ +L N D I+ I TIV GRYD+ CP +AW LH+ P + + +GH++ EP
Sbjct: 247 NQILANCDKIKDIPTTIVHGRYDIVCPADNAWLLHQQLPNSRLVISEASGHASVEPNTKH 306
Query: 315 ELVATNEKLKNL 326
L+A + + +L
Sbjct: 307 HLIAATQSMLSL 318
|
|
| TIGR_CMR|CPS_0863 CPS_0863 "proline iminopeptidase" [Colwellia psychrerythraea 34H (taxid:167879)] | Back alignment and assigned GO terms |
|---|
Score = 641 (230.7 bits), Expect = 8.8e-63, P = 8.8e-63
Identities = 133/320 (41%), Positives = 188/320 (58%)
Query: 14 NLYPYVEPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYR 73
+LYP +EP+S LKVS +H +Y EQ GN G PV+FLHGGPG +R +FDP Y
Sbjct: 4 SLYPEIEPFSQQYLKVSPLHQLYIEQCGNEQGIPVIFLHGGPGSACREQHRCYFDPAIYH 63
Query: 74 IILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLA 133
IILFDQRG G+S P L +N T L++DI +R+HL I +W VFGGSWG+TLAL Y+
Sbjct: 64 IILFDQRGCGRSKPQGELKENNTLALVEDINTIRKHLGISQWLVFGGSWGATLALVYAKQ 123
Query: 134 HPDKVTGLVLRGIFLLRKKEIDWFYEG-GAAAIYPDAWESFRDLIPENERSCFVDA-YSK 191
+P +V G++LRG+FL R ++I+W Y GAA IYPDAW++ D +P ++ ++A Y +
Sbjct: 124 YPKQVLGMILRGVFLGRAQDINWVYTNKGAAQIYPDAWQALVDNLPIEQQQAPLNALYQR 183
Query: 192 RLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFF 251
+NSD++ ++ A R +WE ++ P D + + I+ HY +N+ F
Sbjct: 184 LINSDEQISRDAYNRL-QQWESAILNIQPGTP---ASIVDTINKKPSIIQLHYSINRCFI 239
Query: 252 PSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPG 311
+ +L+ I I I I+QGRYD CP+ AW L P+A V+ AGH ANEP
Sbjct: 240 EKNP-ILEQITQISDIPIKIIQGRYDFVCPVEQAWQLAYHCPQAKLTVIDMAGHLANEPL 298
Query: 312 IAAELVATNEKLKNLIKNGH 331
++ LV N H
Sbjct: 299 MSNALVEATLSFSKQFLNHH 318
|
|
| TIGR_CMR|SO_4400 SO_4400 "proline iminopeptidase, putative" [Shewanella oneidensis MR-1 (taxid:211586)] | Back alignment and assigned GO terms |
|---|
Score = 400 (145.9 bits), Expect = 3.0e-37, P = 3.0e-37
Identities = 107/303 (35%), Positives = 154/303 (50%)
Query: 13 TNLYPYVEPY-STGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDF 71
T++Y V P+ L + ++ Q GNP G P+++LHGGPG G + S F+P+
Sbjct: 3 TDVYQ-VAPFIRRDWLMMGSGQQLHLAQYGNPQGIPLLYLHGGPGAGASVSELSLFNPEH 61
Query: 72 YRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYS 131
Y I+L DQRGAG+S P L+ N LI DIE +R L I W + GGS+G+TLAL YS
Sbjct: 62 YWILLLDQRGAGQSLPSGELEHNHLNGLICDIEAIRIRLGIERWCLAGGSFGATLALIYS 121
Query: 132 LAHPDKVTGLVLRGIFLLRKKEIDWFYE-GGAAAIYPDAWESFRDLIPENERSCFVDAYS 190
P++V VL +F+ K+ I+W Y GAA +YP A F P + Y
Sbjct: 122 GLFPNRVIAQVLWALFIPSKEGIEWLYTPSGAAQLYPQAHREFA--APSIGLADLFTHYQ 179
Query: 191 KRLNSDDKETQYAAARAWTKWEMMTAHL---LPNEENIKRGEDDIFSLAFARIENHYFLN 247
N+ D+ T++ AR W +WE+ A + LP + ++ LA A+IE HY N
Sbjct: 180 LGFNAQDEATRHEFARRWIQWELTLAGVPIALPRRLSAQQ-------LALAQIELHYAQN 232
Query: 248 KGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPM-MSAWDLHKAWPEA-DFKVVADAGH 305
G+F S +L + + ++QG D CP + A L K + + D GH
Sbjct: 233 -GYFNMFS-VLQRVTSQVTARTLLLQGTQDAVCPARLLATFLTKVGNHRIEIHSIVDGGH 290
Query: 306 SAN 308
S N
Sbjct: 291 SLN 293
|
|
| UNIPROTKB|Q81R41 BA_2217 "Alpha/beta hydrolase family protein" [Bacillus anthracis (taxid:1392)] | Back alignment and assigned GO terms |
|---|
Score = 165 (63.1 bits), Expect = 6.1e-10, P = 6.1e-10
Identities = 39/116 (33%), Positives = 61/116 (52%)
Query: 35 IYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFD--PDFYRIILFDQRGAGKS---TPHA 89
+Y E G+P PV++LHGGPG + + D +I+ DQRG +S T
Sbjct: 20 LYVETHGDPKNKPVLYLHGGPGESCYDFSFHQAERLKDSLYVIMIDQRGVCRSEEITEDE 79
Query: 90 CLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRG 145
N DLI+D E+L++ L+I +W + G S+G LAL Y+ +P + ++ G
Sbjct: 80 AFGLN---DLIEDCEELKKVLQIKKWSIIGHSFGGYLALLYASIYPGSIKKIIFEG 132
|
|
| TIGR_CMR|BA_2217 BA_2217 "hydrolase, alpha/beta fold family" [Bacillus anthracis str. Ames (taxid:198094)] | Back alignment and assigned GO terms |
|---|
Score = 165 (63.1 bits), Expect = 6.1e-10, P = 6.1e-10
Identities = 39/116 (33%), Positives = 61/116 (52%)
Query: 35 IYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFD--PDFYRIILFDQRGAGKS---TPHA 89
+Y E G+P PV++LHGGPG + + D +I+ DQRG +S T
Sbjct: 20 LYVETHGDPKNKPVLYLHGGPGESCYDFSFHQAERLKDSLYVIMIDQRGVCRSEEITEDE 79
Query: 90 CLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRG 145
N DLI+D E+L++ L+I +W + G S+G LAL Y+ +P + ++ G
Sbjct: 80 AFGLN---DLIEDCEELKKVLQIKKWSIIGHSFGGYLALLYASIYPGSIKKIIFEG 132
|
|
| UNIPROTKB|Q81N74 BAS3098 "Hydrolase, alpha/beta fold family" [Bacillus anthracis (taxid:1392)] | Back alignment and assigned GO terms |
|---|
Score = 110 (43.8 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 34/131 (25%), Positives = 62/131 (47%)
Query: 19 VEPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFD------PDFY 72
++P + + +S+ TI +++ G +V +HG T S FD D Y
Sbjct: 2 IKPATMEFVSLSNGETIAYQEVGRQNAEILVLIHGN----MTSSQH--FDLVIEKLQDQY 55
Query: 73 RIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSL 132
I D RG G+ST + +D + D +D++ L++ ++ + G S G +A+ ++
Sbjct: 56 HIYALDLRGFGQSTYNKAID--SIQDFAEDVKLFIDGLKLEKFSLMGWSMGGGVAMQFTA 113
Query: 133 AHPDKVTGLVL 143
HP V L+L
Sbjct: 114 NHPTFVEKLIL 124
|
|
| TIGR_CMR|BA_3343 BA_3343 "hydrolase, alpha/beta fold family" [Bacillus anthracis str. Ames (taxid:198094)] | Back alignment and assigned GO terms |
|---|
Score = 110 (43.8 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 34/131 (25%), Positives = 62/131 (47%)
Query: 19 VEPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFD------PDFY 72
++P + + +S+ TI +++ G +V +HG T S FD D Y
Sbjct: 2 IKPATMEFVSLSNGETIAYQEVGRQNAEILVLIHGN----MTSSQH--FDLVIEKLQDQY 55
Query: 73 RIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSL 132
I D RG G+ST + +D + D +D++ L++ ++ + G S G +A+ ++
Sbjct: 56 HIYALDLRGFGQSTYNKAID--SIQDFAEDVKLFIDGLKLEKFSLMGWSMGGGVAMQFTA 113
Query: 133 AHPDKVTGLVL 143
HP V L+L
Sbjct: 114 NHPTFVEKLIL 124
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q87DF8 | PIP_XYLFT | 3, ., 4, ., 1, 1, ., 5 | 0.5681 | 0.9274 | 0.9808 | yes | no |
| Q9PD69 | PIP_XYLFA | 3, ., 4, ., 1, 1, ., 5 | 0.5649 | 0.9274 | 0.9808 | yes | no |
| P47266 | PIP_MYCGE | 3, ., 4, ., 1, 1, ., 5 | 0.3661 | 0.8731 | 0.9383 | yes | no |
| O32449 | PIP_SERMA | 3, ., 4, ., 1, 1, ., 5 | 0.5290 | 0.9335 | 0.9747 | N/A | no |
| P52279 | PIP_XANCI | 3, ., 4, ., 1, 1, ., 5 | 0.5584 | 0.9305 | 0.9840 | yes | no |
| P42786 | PIP_NEIGO | 3, ., 4, ., 1, 1, ., 5 | 0.5225 | 0.9184 | 0.9806 | yes | no |
| P75092 | PIP_MYCPN | 3, ., 4, ., 1, 1, ., 5 | 0.3602 | 0.8700 | 0.9320 | yes | no |
| Q9JUV1 | PIP_NEIMA | 3, ., 4, ., 1, 1, ., 5 | 0.5193 | 0.9184 | 0.9806 | yes | no |
| Q9JZR6 | PIP_NEIMB | 3, ., 4, ., 1, 1, ., 5 | 0.5225 | 0.9184 | 0.9806 | yes | no |
| Q9S2L4 | PIP_STRCO | 3, ., 4, ., 1, 1, ., 5 | 0.4049 | 0.9335 | 0.9566 | yes | no |
| P93732 | PIP_ARATH | 3, ., 4, ., 1, 1, ., 5 | 0.8317 | 0.9486 | 0.8263 | yes | no |
| O83041 | PIP_PLEBO | 3, ., 4, ., 1, 1, ., 5 | 0.5962 | 0.9577 | 0.9875 | N/A | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.4.11.5 | 0.991 |
| 3rd Layer | 3.4.11 | 0.976 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | gw1.I.4241.1 | hypothetical protein (326 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
 | estExt_fgenesh4_pm.C_LG_VI0132 | pyrroline-5-carboxylate reductase (EC-1.5.1.2) (279 aa) | • | • | 0.916 | ||||||
 | gw1.XVII.805.1 | hypothetical protein (226 aa) | • | 0.899 | |||||||
 | gw1.XVII.795.1 | oxidoreductase, 2OG-Fe(II) oxygenase family protein (268 aa) | • | 0.899 | |||||||
 | gw1.VIII.152.1 | hypothetical protein (290 aa) | • | 0.899 | |||||||
 | gw1.IX.2483.1 | hypothetical protein (280 aa) | • | 0.899 | |||||||
 | gw1.IV.4171.1 | proline dehydrogenase (EC-1.5.99.8) (435 aa) | • | 0.899 | |||||||
 | gw1.123.99.1 | proline dehydrogenase (EC-1.5.99.8) (440 aa) | • | 0.899 | |||||||
 | fgenesh4_pm.C_LG_V000671 | hypothetical protein (288 aa) | • | 0.899 | |||||||
 | eugene3.00570032 | hypothetical protein (291 aa) | • | 0.899 | |||||||
 | estExt_fgenesh4_pm.C_LG_II1012 | hypothetical protein (287 aa) | • | 0.899 | |||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 331 | |||
| TIGR01249 | 306 | TIGR01249, pro_imino_pep_1, proline iminopeptidase | 0.0 | |
| pfam00561 | 226 | pfam00561, Abhydrolase_1, alpha/beta hydrolase fol | 2e-23 | |
| COG0596 | 282 | COG0596, MhpC, Predicted hydrolases or acyltransfe | 7e-23 | |
| TIGR01250 | 289 | TIGR01250, pro_imino_pep_2, proline-specific pepti | 7e-14 | |
| pfam12697 | 187 | pfam12697, Abhydrolase_6, Alpha/beta hydrolase fam | 3e-12 | |
| TIGR03611 | 248 | TIGR03611, RutD, pyrimidine utilization protein D | 7e-09 | |
| TIGR03695 | 252 | TIGR03695, menH_SHCHC, 2-succinyl-6-hydroxy-2,4-cy | 8e-07 | |
| COG2267 | 298 | COG2267, PldB, Lysophospholipase [Lipid metabolism | 2e-05 | |
| PRK14875 | 371 | PRK14875, PRK14875, acetoin dehydrogenase E2 subun | 7e-05 | |
| pfam12695 | 145 | pfam12695, Abhydrolase_5, Alpha/beta hydrolase fam | 7e-05 | |
| TIGR02427 | 251 | TIGR02427, protocat_pcaD, 3-oxoadipate enol-lacton | 9e-05 | |
| TIGR03343 | 282 | TIGR03343, biphenyl_bphD, 2-hydroxy-6-oxo-6-phenyl | 2e-04 | |
| PRK08775 | 343 | PRK08775, PRK08775, homoserine O-acetyltransferase | 3e-04 | |
| PLN02894 | 402 | PLN02894, PLN02894, hydrolase, alpha/beta fold fam | 8e-04 | |
| pfam03096 | 284 | pfam03096, Ndr, Ndr family | 0.001 | |
| COG2021 | 368 | COG2021, MET2, Homoserine acetyltransferase [Amino | 0.004 |
| >gnl|CDD|130316 TIGR01249, pro_imino_pep_1, proline iminopeptidase, Neisseria-type subfamily | Back alignment and domain information |
|---|
Score = 510 bits (1316), Expect = 0.0
Identities = 196/307 (63%), Positives = 229/307 (74%), Gaps = 2/307 (0%)
Query: 19 VEPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFD 78
+P+ +G L VSD H +Y+EQSGNP G PVVFLHGGPG GT P RRFFDP+ YRI+LFD
Sbjct: 1 TKPFVSGYLNVSDNHQLYYEQSGNPDGKPVVFLHGGPGSGTDPGCRRFFDPETYRIVLFD 60
Query: 79 QRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKV 138
QRG GKSTPHACL++NTTWDL+ DIEKLR+ L I W VFGGSWGSTLALAY+ HP+ V
Sbjct: 61 QRGCGKSTPHACLEENTTWDLVADIEKLREKLGIKNWLVFGGSWGSTLALAYAQTHPEVV 120
Query: 139 TGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENER-SCFVDAYSKRLNSDD 197
TGLVLRGIFLLR+KE WFYEGGA+ IYPDAW+ F D IPENER V+AY RL S D
Sbjct: 121 TGLVLRGIFLLREKEWSWFYEGGASMIYPDAWQRFMDSIPENERNEQLVNAYHDRLQSGD 180
Query: 198 KETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFL 257
+ET+ AAA+AW WE T L P E + ED FSLAFAR+ENHYF+NKGF ++F+
Sbjct: 181 EETKLAAAKAWVDWE-STTLLRPINEIVSTAEDFKFSLAFARLENHYFVNKGFLDVENFI 239
Query: 258 LDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELV 317
LDNI IR+I IV GRYD+CCP+ SAW LHKA+PEA+ KV +AGHSA +P A LV
Sbjct: 240 LDNISKIRNIPTYIVHGRYDLCCPLQSAWALHKAFPEAELKVTNNAGHSAFDPNNLAALV 299
Query: 318 ATNEKLK 324
E
Sbjct: 300 HALETYL 306
|
This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members. Length = 306 |
| >gnl|CDD|201306 pfam00561, Abhydrolase_1, alpha/beta hydrolase fold | Back alignment and domain information |
|---|
Score = 96.1 bits (239), Expect = 2e-23
Identities = 55/239 (23%), Positives = 89/239 (37%), Gaps = 26/239 (10%)
Query: 72 YRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYS 131
+ +I FD RG G+S+P DL +D+E L L + + + G S G +ALAY+
Sbjct: 1 FDVIAFDLRGFGRSSPPKDFADYRFDDLAEDLEALLDALGLDKVNLVGHSMGGLIALAYA 60
Query: 132 LAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSK 191
+PD+V LVL G G ++ + P L+ +N + D+
Sbjct: 61 AKYPDRVKALVLVGT---------VHPAGLSSPLTPRGN--LLGLLLDNFFNRLYDSVEA 109
Query: 192 RLNSDDKETQYAAARAWTKWEMMTA-HLLPNEENIKRGEDDIFSLAFARIENHYFLNKGF 250
L K+ Q ++ ++ R + + Y L
Sbjct: 110 LLGRAIKQFQA------LGRPFVSDFLKQFELSSLIRFGETLALDGLLGYALGYDLVWDR 163
Query: 251 FPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANE 309
L +ID + I+ G D P ++ L +P A V+ DAGH A
Sbjct: 164 SA----ALKDID----VPTLIIWGDDDPLVPPDASEKLAALFPNAQLVVIDDAGHLAQL 214
|
This catalytic domain is found in a very wide range of enzymes. Length = 226 |
| >gnl|CDD|223669 COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Score = 95.9 bits (237), Expect = 7e-23
Identities = 65/296 (21%), Positives = 91/296 (30%), Gaps = 31/296 (10%)
Query: 29 VSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDF---YRIILFDQRGAGKS 85
+D + + ++G G P+V LHG PG + P YR+I D RG G+S
Sbjct: 6 AADGVRLAYREAG-GGGPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRS 64
Query: 86 TPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRG 145
P + DD+ L L + + + G S G +ALA +L HPD+V GLVL G
Sbjct: 65 DPAG----YSLSAYADDLAALLDALGLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIG 120
Query: 146 IFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAA 205
+ P L + AAA
Sbjct: 121 PAPPPGLLEAALRQ-------PAGAAPLAALADLLLGLDAAAFAALLAALGLLAALAAAA 173
Query: 206 RAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIR 265
RA + L R D +
Sbjct: 174 RAGLAEALRAPLLGAAAAAFARAARAD----------LAAALLALLDRDLRAALARITVP 223
Query: 266 HINATIVQGRYDVCCPMMSAWDLHKAWP-EADFKVVADAGHSANE--PGIAAELVA 318
I+ G D P A L A P +A V+ AGH + P A +
Sbjct: 224 ---TLIIHGEDDPVVPAELARRLAAALPNDARLVVIPGAGHFPHLEAPEAFAAALL 276
|
Length = 282 |
| >gnl|CDD|188121 TIGR01250, pro_imino_pep_2, proline-specific peptidase, Bacillus coagulans-type subfamily | Back alignment and domain information |
|---|
Score = 70.5 bits (173), Expect = 7e-14
Identities = 34/132 (25%), Positives = 61/132 (46%), Gaps = 16/132 (12%)
Query: 22 YSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSN-----RRFFDPDFYRIIL 76
GI+ V + ++ + G ++ LHGGPG R + +I+
Sbjct: 2 QIEGIITVDGGYHLFTKTGGEGEKIKLLLLHGGPGM---SHEYLENLRELLKEEGREVIM 58
Query: 77 FDQRGAGKSTPHACLDQNT----TWD-LIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYS 131
+DQ G G S D + T D +D++E++R+ L + ++ + G SWG LA Y+
Sbjct: 59 YDQLGCGYS---DQPDDSDEELWTIDYFVDELEEVREKLGLDKFYLLGHSWGGMLAQEYA 115
Query: 132 LAHPDKVTGLVL 143
L + + GL++
Sbjct: 116 LKYGQHLKGLII 127
|
This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase. Length = 289 |
| >gnl|CDD|221720 pfam12697, Abhydrolase_6, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 64.0 bits (156), Expect = 3e-12
Identities = 30/98 (30%), Positives = 41/98 (41%), Gaps = 5/98 (5%)
Query: 48 VVFLHGGPGGGTTPSNRRFFDP--DFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEK 105
VV LHG G S R + YR++ D G G S + D D+
Sbjct: 1 VVLLHGAGGSAE--SWRPLAEALAAGYRVLAPDLPGHGDSDGPP-RTPYSLEDDAADLAA 57
Query: 106 LRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVL 143
L L + + G S G +ALA + P++V GLVL
Sbjct: 58 LLDALGLGPVVLVGHSLGGAVALAAAARRPERVAGLVL 95
|
This family contains alpha/beta hydrolase enzymes of diverse specificity. Length = 187 |
| >gnl|CDD|211851 TIGR03611, RutD, pyrimidine utilization protein D | Back alignment and domain information |
|---|
Score = 55.1 bits (133), Expect = 7e-09
Identities = 61/289 (21%), Positives = 98/289 (33%), Gaps = 85/289 (29%)
Query: 45 GHPVVFLHGGPGGGTTPSNRRFFDPDF------YRIILFDQRGAGKSTPHACLDQNTTWD 98
PVV L G GG ++ P + ++ +D RG G+S P +
Sbjct: 11 DAPVVVLSSGLGGSG-----SYWAPQLAVLTQRFHVVTYDHRGTGRS-PGELPPDYSIAH 64
Query: 99 LIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVL-----------RGIF 147
+ DD+ +L L I + G + G + L +L +P+++T LVL R F
Sbjct: 65 MADDVLQLLDALGIERFHFVGHALGGLIGLQLALDYPERLTSLVLINGWSRPDPHTRRCF 124
Query: 148 LLRKKEIDWFYEGGAAA--------IYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKE 199
+R Y G A +YP W S + RL +D+
Sbjct: 125 DVRIA---LLYHAGPEAYVHAQPLFLYPADWIS---------------ENAPRLAADEAH 166
Query: 200 TQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLD 259
AH ++R I +L +
Sbjct: 167 --------------ALAHFPGKNNVLRR----INALEAFDVSAR---------------- 192
Query: 260 NIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSAN 308
+D IRH ++ R D+ P + L A P A K++ GH++N
Sbjct: 193 -LDRIRH-PVLLIAARDDMLVPYTCSLRLAAALPNAQLKLLPYGGHASN 239
|
This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067. Length = 248 |
| >gnl|CDD|234315 TIGR03695, menH_SHCHC, 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase | Back alignment and domain information |
|---|
Score = 49.1 bits (118), Expect = 8e-07
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 3/104 (2%)
Query: 44 TGHPVVFLHGGPGGGTTPSN-RRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDD 102
+VFLHG G G P F R + D G G S + +++ ++
Sbjct: 1 AKPVLVFLHGFLGSGADWQALIELLGPHF-RCLAIDLPGHGSSQSPSDIERYDFEEIAQL 59
Query: 103 IEK-LRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRG 145
+ L L I + + G S G +AL Y+L +P++V GL+L
Sbjct: 60 LLATLLDQLGIEPFFLVGYSMGGRIALYYALQYPERVQGLILES 103
|
This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1- carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone]. Length = 252 |
| >gnl|CDD|225176 COG2267, PldB, Lysophospholipase [Lipid metabolism] | Back alignment and domain information |
|---|
Score = 45.1 bits (107), Expect = 2e-05
Identities = 39/201 (19%), Positives = 64/201 (31%), Gaps = 30/201 (14%)
Query: 37 WEQSGNPTGHPVVFLHGGPGGGTTPSNR-RFFDPDF----YRIILFDQRGAGKS--TPHA 89
W P G VV +HG S R D + + D RG G+S
Sbjct: 27 WAAPEPPKG-VVVLVHGL----GEHSGRYEELADDLAARGFDVYALDLRGHGRSPRGQRG 81
Query: 90 CLDQNTTWDLIDDIEKLRQHLEIPEWQ----VFGGSWGSTLALAYSLAHPDKVTGLVL-- 143
+D + +DD++ + + P+ + G S G +AL Y +P ++ GLVL
Sbjct: 82 HVDSFADY--VDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSS 139
Query: 144 ----RGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFV---DAYSKRLNSD 196
G +LR + I P + E + + A +D
Sbjct: 140 PALGLGGAILRLI-LARLALKLLGRIRPKL--PVDSNLLEGVLTDDLSRDPAEVAAYEAD 196
Query: 197 DKETQYAAARAWTKWEMMTAH 217
W ++
Sbjct: 197 PLIGVGGPVSRWVDLALLAGR 217
|
Length = 298 |
| >gnl|CDD|184875 PRK14875, PRK14875, acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 43.8 bits (104), Expect = 7e-05
Identities = 28/114 (24%), Positives = 43/114 (37%), Gaps = 8/114 (7%)
Query: 33 HTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRF-FDP--DFYRIILFDQRGAGKSTPHA 89
T+ + + G G PVV +HG G +N F +I D G G S+
Sbjct: 119 RTVRYLRLGEGDGTPVVLIHGFGGDL---NNWLFNHAALAAGRPVIALDLPGHGASSKA- 174
Query: 90 CLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVL 143
+ + +L + L I + G S G +AL + P +V L L
Sbjct: 175 -VGAGSLDELAAAVLAFLDALGIERAHLVGHSMGGAVALRLAARAPQRVASLTL 227
|
Length = 371 |
| >gnl|CDD|221718 pfam12695, Abhydrolase_5, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 7e-05
Identities = 22/100 (22%), Positives = 32/100 (32%), Gaps = 15/100 (15%)
Query: 47 PVVFLHGGPGGGTTPSNRRFFD---PDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDI 103
VV LHG GG + Y ++ D G G S ++ D
Sbjct: 1 LVVLLHGA--GGDPEAYAPLARALASRGYNVVAVDYPGHGASL-----GAPDAEAVLAD- 52
Query: 104 EKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVL 143
L+ + G S G +AL + P +VL
Sbjct: 53 ----APLDPERIVLVGHSLGGGVALLLAARDPRVKAAVVL 88
|
This family contains a diverse range of alpha/beta hydrolase enzymes. Length = 145 |
| >gnl|CDD|131480 TIGR02427, protocat_pcaD, 3-oxoadipate enol-lactonase | Back alignment and domain information |
|---|
Score = 42.7 bits (101), Expect = 9e-05
Identities = 33/120 (27%), Positives = 51/120 (42%), Gaps = 21/120 (17%)
Query: 34 TIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDP------DFYRIILFDQRGAGKS-- 85
+++ G G PV+ G ++ R +DP +R++ +D+RG G S
Sbjct: 1 RLHYRLDGAADGAPVLVFINSLG-----TDLRMWDPVLPALTPDFRVLRYDKRGHGLSDA 55
Query: 86 --TPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVL 143
P+ + DL DD+ L HL I G S G +A + PD+V LVL
Sbjct: 56 PEGPY------SIEDLADDVLALLDHLGIERAVFCGLSLGGLIAQGLAARRPDRVRALVL 109
|
Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate [Energy metabolism, Other]. Length = 251 |
| >gnl|CDD|132386 TIGR03343, biphenyl_bphD, 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase | Back alignment and domain information |
|---|
Score = 42.2 bits (99), Expect = 2e-04
Identities = 37/121 (30%), Positives = 56/121 (46%), Gaps = 19/121 (15%)
Query: 35 IYWEQSGNPTGHPVVFLHGG-PGGGTTPSNRRFFDPDF---YRIILFDQRGAGKS----- 85
I++ ++GN G V+ LHGG PG G + R P YR+IL D G KS
Sbjct: 22 IHYNEAGN--GEAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVM 79
Query: 86 -TPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLR 144
++ L+D ++ + HL G S G AL ++L +PD++ L+L
Sbjct: 80 DEQRGLVNARAVKGLMDALDIEKAHL-------VGNSMGGATALNFALEYPDRIGKLILM 132
Query: 145 G 145
G
Sbjct: 133 G 133
|
Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself. Length = 282 |
| >gnl|CDD|181553 PRK08775, PRK08775, homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 41.7 bits (98), Expect = 3e-04
Identities = 36/118 (30%), Positives = 48/118 (40%), Gaps = 21/118 (17%)
Query: 43 PTGHPVVFLHGG-------------PGGG---TTPSNRRFFDPDFYRIILFDQRGAGKST 86
P G PVVF+ GG P G + R DP +R++ FD GA S
Sbjct: 55 PAGAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSL 114
Query: 87 PHACLDQNTTWDLIDDIEKLRQHLEIPEWQVF-GGSWGSTLALAYSLAHPDKVTGLVL 143
T D D I L L I F G S+G+ + L ++ HP +V LV+
Sbjct: 115 DVPI----DTADQADAIALLLDALGIARLHAFVGYSYGALVGLQFASRHPARVRTLVV 168
|
Length = 343 |
| >gnl|CDD|215484 PLN02894, PLN02894, hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Score = 40.7 bits (95), Expect = 8e-04
Identities = 33/115 (28%), Positives = 49/115 (42%), Gaps = 17/115 (14%)
Query: 41 GNPTGHPVVFLHG-GPGGGTTPSNRRFFDPDF------YRIILFDQRGAGKST--PHACL 91
+V +HG G G FF +F +R+I DQ G G S+ C
Sbjct: 101 SKEDAPTLVMVHGYGASQG-------FFFRNFDALASRFRVIAIDQLGWGGSSRPDFTCK 153
Query: 92 DQNTTWD-LIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRG 145
T ID E+ R+ + + + G S+G +A Y+L HP+ V L+L G
Sbjct: 154 STEETEAWFIDSFEEWRKAKNLSNFILLGHSFGGYVAAKYALKHPEHVQHLILVG 208
|
Length = 402 |
| >gnl|CDD|190521 pfam03096, Ndr, Ndr family | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 0.001
Identities = 19/62 (30%), Positives = 28/62 (45%)
Query: 98 DLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWF 157
DL D I + H + G G+ + ++L HP++V GLVL I+WF
Sbjct: 84 DLADMIPVVLDHFRLKSVIGMGVGAGAYILARFALKHPERVEGLVLINPDPNAAGWIEWF 143
Query: 158 YE 159
Y
Sbjct: 144 YN 145
|
This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted. The precise molecular and cellular function of members of this family is still unknown. Yet, they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases pfam00561, suggesting that this family may have an enzymatic function (Bateman A pers. obs.). Length = 284 |
| >gnl|CDD|224932 COG2021, MET2, Homoserine acetyltransferase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 38.5 bits (90), Expect = 0.004
Identities = 23/98 (23%), Positives = 38/98 (38%), Gaps = 21/98 (21%)
Query: 54 GPGGGTTPSNRRFFDPDFYRIILFDQRGAGKST--PHACLDQNTTWDL------IDDI-- 103
GPG + D + + +I + G K + P + + I D+
Sbjct: 83 GPG--------KPIDTERFFVICTNVLGGCKGSTGPSSINPGGKPYGSDFPVITIRDMVR 134
Query: 104 --EKLRQHLEIPEWQ-VFGGSWGSTLALAYSLAHPDKV 138
L L I + V GGS G AL +++ +PD+V
Sbjct: 135 AQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPDRV 172
|
Length = 368 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 331 | |||
| TIGR01249 | 306 | pro_imino_pep_1 proline iminopeptidase, Neisseria- | 100.0 | |
| PLN02824 | 294 | hydrolase, alpha/beta fold family protein | 100.0 | |
| PRK00870 | 302 | haloalkane dehalogenase; Provisional | 100.0 | |
| KOG4178 | 322 | consensus Soluble epoxide hydrolase [Lipid transpo | 100.0 | |
| TIGR02240 | 276 | PHA_depoly_arom poly(3-hydroxyalkanoate) depolymer | 100.0 | |
| PRK03592 | 295 | haloalkane dehalogenase; Provisional | 100.0 | |
| PLN02679 | 360 | hydrolase, alpha/beta fold family protein | 100.0 | |
| TIGR03343 | 282 | biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-die | 100.0 | |
| PRK06489 | 360 | hypothetical protein; Provisional | 100.0 | |
| PRK03204 | 286 | haloalkane dehalogenase; Provisional | 100.0 | |
| PLN03087 | 481 | BODYGUARD 1 domain containing hydrolase; Provision | 100.0 | |
| PLN02385 | 349 | hydrolase; alpha/beta fold family protein | 100.0 | |
| TIGR03056 | 278 | bchO_mg_che_rel putative magnesium chelatase acces | 100.0 | |
| PLN02965 | 255 | Probable pheophorbidase | 100.0 | |
| PRK10349 | 256 | carboxylesterase BioH; Provisional | 100.0 | |
| PLN02578 | 354 | hydrolase | 100.0 | |
| PLN03084 | 383 | alpha/beta hydrolase fold protein; Provisional | 100.0 | |
| PRK07581 | 339 | hypothetical protein; Validated | 100.0 | |
| TIGR03611 | 257 | RutD pyrimidine utilization protein D. This protei | 100.0 | |
| PRK10673 | 255 | acyl-CoA esterase; Provisional | 100.0 | |
| PLN02298 | 330 | hydrolase, alpha/beta fold family protein | 100.0 | |
| TIGR02427 | 251 | protocat_pcaD 3-oxoadipate enol-lactonase. Members | 100.0 | |
| PRK08775 | 343 | homoserine O-acetyltransferase; Provisional | 100.0 | |
| PRK10749 | 330 | lysophospholipase L2; Provisional | 100.0 | |
| KOG1454 | 326 | consensus Predicted hydrolase/acyltransferase (alp | 100.0 | |
| TIGR01250 | 288 | pro_imino_pep_2 proline-specific peptidases, Bacil | 100.0 | |
| PRK00175 | 379 | metX homoserine O-acetyltransferase; Provisional | 100.0 | |
| PHA02857 | 276 | monoglyceride lipase; Provisional | 100.0 | |
| TIGR01392 | 351 | homoserO_Ac_trn homoserine O-acetyltransferase. Th | 100.0 | |
| PRK11126 | 242 | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxyl | 99.98 | |
| TIGR01738 | 245 | bioH putative pimeloyl-BioC--CoA transferase BioH. | 99.97 | |
| PRK14875 | 371 | acetoin dehydrogenase E2 subunit dihydrolipoyllysi | 99.97 | |
| PLN02211 | 273 | methyl indole-3-acetate methyltransferase | 99.97 | |
| KOG4409 | 365 | consensus Predicted hydrolase/acyltransferase (alp | 99.97 | |
| PF12697 | 228 | Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3 | 99.97 | |
| COG2267 | 298 | PldB Lysophospholipase [Lipid metabolism] | 99.97 | |
| PLN02894 | 402 | hydrolase, alpha/beta fold family protein | 99.97 | |
| PLN02511 | 388 | hydrolase | 99.97 | |
| TIGR03695 | 251 | menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene | 99.97 | |
| KOG1455 | 313 | consensus Lysophospholipase [Lipid transport and m | 99.97 | |
| PLN02652 | 395 | hydrolase; alpha/beta fold family protein | 99.97 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.96 | |
| PLN02980 | 1655 | 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesi | 99.96 | |
| COG1647 | 243 | Esterase/lipase [General function prediction only] | 99.95 | |
| KOG2984 | 277 | consensus Predicted hydrolase [General function pr | 99.95 | |
| PRK06765 | 389 | homoserine O-acetyltransferase; Provisional | 99.95 | |
| TIGR01607 | 332 | PST-A Plasmodium subtelomeric family (PST-A). Thes | 99.95 | |
| PRK13604 | 307 | luxD acyl transferase; Provisional | 99.95 | |
| PRK10985 | 324 | putative hydrolase; Provisional | 99.95 | |
| PRK05077 | 414 | frsA fermentation/respiration switch protein; Revi | 99.94 | |
| PLN02872 | 395 | triacylglycerol lipase | 99.94 | |
| KOG2382 | 315 | consensus Predicted alpha/beta hydrolase [General | 99.93 | |
| TIGR03100 | 274 | hydr1_PEP hydrolase, ortholog 1, exosortase system | 99.93 | |
| PF00561 | 230 | Abhydrolase_1: alpha/beta hydrolase fold A web pag | 99.93 | |
| TIGR01836 | 350 | PHA_synth_III_C poly(R)-hydroxyalkanoic acid synth | 99.91 | |
| TIGR01838 | 532 | PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, | 99.91 | |
| PRK11071 | 190 | esterase YqiA; Provisional | 99.91 | |
| PRK10566 | 249 | esterase; Provisional | 99.91 | |
| KOG1552 | 258 | consensus Predicted alpha/beta hydrolase [General | 99.89 | |
| PRK07868 | 994 | acyl-CoA synthetase; Validated | 99.88 | |
| KOG4391 | 300 | consensus Predicted alpha/beta hydrolase BEM46 [Ge | 99.87 | |
| COG0596 | 282 | MhpC Predicted hydrolases or acyltransferases (alp | 99.86 | |
| COG2021 | 368 | MET2 Homoserine acetyltransferase [Amino acid tran | 99.86 | |
| PF12695 | 145 | Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3 | 99.86 | |
| KOG2564 | 343 | consensus Predicted acetyltransferases and hydrola | 99.85 | |
| KOG1838 | 409 | consensus Alpha/beta hydrolase [General function p | 99.85 | |
| COG0429 | 345 | Predicted hydrolase of the alpha/beta-hydrolase fo | 99.85 | |
| COG1506 | 620 | DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-pept | 99.84 | |
| KOG4667 | 269 | consensus Predicted esterase [Lipid transport and | 99.83 | |
| PF00326 | 213 | Peptidase_S9: Prolyl oligopeptidase family This fa | 99.83 | |
| TIGR03101 | 266 | hydr2_PEP hydrolase, ortholog 2, exosortase system | 99.82 | |
| PF03096 | 283 | Ndr: Ndr family; InterPro: IPR004142 This family c | 99.82 | |
| KOG2931 | 326 | consensus Differentiation-related gene 1 protein ( | 99.82 | |
| PRK11460 | 232 | putative hydrolase; Provisional | 99.81 | |
| PF06342 | 297 | DUF1057: Alpha/beta hydrolase of unknown function | 99.79 | |
| COG3208 | 244 | GrsT Predicted thioesterase involved in non-riboso | 99.79 | |
| PLN02442 | 283 | S-formylglutathione hydrolase | 99.78 | |
| TIGR02821 | 275 | fghA_ester_D S-formylglutathione hydrolase. This m | 99.78 | |
| PF02230 | 216 | Abhydrolase_2: Phospholipase/Carboxylesterase; Int | 99.78 | |
| PLN00021 | 313 | chlorophyllase | 99.77 | |
| COG2945 | 210 | Predicted hydrolase of the alpha/beta superfamily | 99.75 | |
| PF01738 | 218 | DLH: Dienelactone hydrolase family; InterPro: IPR0 | 99.74 | |
| TIGR01840 | 212 | esterase_phb esterase, PHB depolymerase family. Th | 99.73 | |
| TIGR00976 | 550 | /NonD putative hydrolase, CocE/NonD family. This m | 99.73 | |
| COG0400 | 207 | Predicted esterase [General function prediction on | 99.72 | |
| TIGR03230 | 442 | lipo_lipase lipoprotein lipase. Members of this pr | 99.71 | |
| PF06500 | 411 | DUF1100: Alpha/beta hydrolase of unknown function | 99.7 | |
| TIGR01849 | 406 | PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, | 99.7 | |
| PF06821 | 171 | Ser_hydrolase: Serine hydrolase; InterPro: IPR0106 | 99.7 | |
| cd00707 | 275 | Pancreat_lipase_like Pancreatic lipase-like enzyme | 99.67 | |
| COG0412 | 236 | Dienelactone hydrolase and related enzymes [Second | 99.67 | |
| PRK10162 | 318 | acetyl esterase; Provisional | 99.67 | |
| PF05448 | 320 | AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR0 | 99.66 | |
| KOG2624 | 403 | consensus Triglyceride lipase-cholesterol esterase | 99.66 | |
| PRK10115 | 686 | protease 2; Provisional | 99.65 | |
| TIGR01839 | 560 | PHA_synth_II poly(R)-hydroxyalkanoic acid synthase | 99.65 | |
| COG4757 | 281 | Predicted alpha/beta hydrolase [General function p | 99.64 | |
| KOG2565 | 469 | consensus Predicted hydrolases or acyltransferases | 99.62 | |
| COG3458 | 321 | Acetyl esterase (deacetylase) [Secondary metabolit | 99.62 | |
| PF08538 | 303 | DUF1749: Protein of unknown function (DUF1749); In | 99.62 | |
| PF02273 | 294 | Acyl_transf_2: Acyl transferase; InterPro: IPR0031 | 99.59 | |
| PF05728 | 187 | UPF0227: Uncharacterised protein family (UPF0227); | 99.56 | |
| PTZ00472 | 462 | serine carboxypeptidase (CBP1); Provisional | 99.55 | |
| PF10230 | 266 | DUF2305: Uncharacterised conserved protein (DUF230 | 99.5 | |
| PRK05371 | 767 | x-prolyl-dipeptidyl aminopeptidase; Provisional | 99.5 | |
| COG3243 | 445 | PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid me | 99.49 | |
| PF00975 | 229 | Thioesterase: Thioesterase domain; InterPro: IPR00 | 99.49 | |
| COG3545 | 181 | Predicted esterase of the alpha/beta hydrolase fol | 99.48 | |
| COG3571 | 213 | Predicted hydrolase of the alpha/beta-hydrolase fo | 99.48 | |
| KOG3043 | 242 | consensus Predicted hydrolase related to dienelact | 99.47 | |
| PF06057 | 192 | VirJ: Bacterial virulence protein (VirJ); InterPro | 99.45 | |
| TIGR03502 | 792 | lipase_Pla1_cef extracellular lipase, Pla-1/cef fa | 99.42 | |
| PF07859 | 211 | Abhydrolase_3: alpha/beta hydrolase fold A web pag | 99.41 | |
| PF12146 | 79 | Hydrolase_4: Putative lysophospholipase; InterPro: | 99.4 | |
| PF02129 | 272 | Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 fam | 99.4 | |
| PF12740 | 259 | Chlorophyllase2: Chlorophyllase enzyme; InterPro: | 99.37 | |
| PRK10252 | 1296 | entF enterobactin synthase subunit F; Provisional | 99.36 | |
| KOG2100 | 755 | consensus Dipeptidyl aminopeptidase [Posttranslati | 99.35 | |
| PF09752 | 348 | DUF2048: Uncharacterized conserved protein (DUF204 | 99.34 | |
| KOG2281 | 867 | consensus Dipeptidyl aminopeptidases/acylaminoacyl | 99.33 | |
| PF10503 | 220 | Esterase_phd: Esterase PHB depolymerase | 99.33 | |
| KOG4627 | 270 | consensus Kynurenine formamidase [Amino acid trans | 99.31 | |
| PRK04940 | 180 | hypothetical protein; Provisional | 99.27 | |
| PF03583 | 290 | LIP: Secretory lipase ; InterPro: IPR005152 This e | 99.27 | |
| COG4099 | 387 | Predicted peptidase [General function prediction o | 99.26 | |
| KOG2551 | 230 | consensus Phospholipase/carboxyhydrolase [Amino ac | 99.22 | |
| PF08840 | 213 | BAAT_C: BAAT / Acyl-CoA thioester hydrolase C term | 99.22 | |
| KOG2112 | 206 | consensus Lysophospholipase [Lipid transport and m | 99.2 | |
| PF11339 | 581 | DUF3141: Protein of unknown function (DUF3141); In | 99.19 | |
| PF03959 | 212 | FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 | 99.18 | |
| PF07819 | 225 | PGAP1: PGAP1-like protein; InterPro: IPR012908 The | 99.18 | |
| COG0657 | 312 | Aes Esterase/lipase [Lipid metabolism] | 99.18 | |
| PF00450 | 415 | Peptidase_S10: Serine carboxypeptidase; InterPro: | 99.16 | |
| PF07224 | 307 | Chlorophyllase: Chlorophyllase; InterPro: IPR01082 | 99.11 | |
| PF06028 | 255 | DUF915: Alpha/beta hydrolase of unknown function ( | 99.11 | |
| COG4188 | 365 | Predicted dienelactone hydrolase [General function | 99.1 | |
| KOG1515 | 336 | consensus Arylacetamide deacetylase [Defense mecha | 99.1 | |
| PF12715 | 390 | Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8 | 99.09 | |
| COG2936 | 563 | Predicted acyl esterases [General function predict | 99.03 | |
| PLN02733 | 440 | phosphatidylcholine-sterol O-acyltransferase | 99.02 | |
| COG3319 | 257 | Thioesterase domains of type I polyketide synthase | 99.01 | |
| PF03403 | 379 | PAF-AH_p_II: Platelet-activating factor acetylhydr | 99.0 | |
| KOG1553 | 517 | consensus Predicted alpha/beta hydrolase BAT5 [Gen | 98.99 | |
| PF01674 | 219 | Lipase_2: Lipase (class 2); InterPro: IPR002918 Li | 98.91 | |
| smart00824 | 212 | PKS_TE Thioesterase. Peptide synthetases are invol | 98.89 | |
| PF00151 | 331 | Lipase: Lipase; InterPro: IPR013818 Triglyceride l | 98.88 | |
| KOG3975 | 301 | consensus Uncharacterized conserved protein [Funct | 98.82 | |
| PF12048 | 310 | DUF3530: Protein of unknown function (DUF3530); In | 98.8 | |
| PF05677 | 365 | DUF818: Chlamydia CHLPS protein (DUF818); InterPro | 98.75 | |
| KOG3253 | 784 | consensus Predicted alpha/beta hydrolase [General | 98.75 | |
| PLN02209 | 437 | serine carboxypeptidase | 98.69 | |
| PLN03016 | 433 | sinapoylglucose-malate O-sinapoyltransferase | 98.67 | |
| COG3509 | 312 | LpqC Poly(3-hydroxybutyrate) depolymerase [Seconda | 98.66 | |
| KOG1282 | 454 | consensus Serine carboxypeptidases (lysosomal cath | 98.66 | |
| KOG4840 | 299 | consensus Predicted hydrolases or acyltransferases | 98.66 | |
| COG3150 | 191 | Predicted esterase [General function prediction on | 98.64 | |
| PF10142 | 367 | PhoPQ_related: PhoPQ-activated pathogenicity-relat | 98.62 | |
| PF04301 | 213 | DUF452: Protein of unknown function (DUF452); Inte | 98.61 | |
| PF05990 | 233 | DUF900: Alpha/beta hydrolase of unknown function ( | 98.6 | |
| PF10340 | 374 | DUF2424: Protein of unknown function (DUF2424); In | 98.54 | |
| PRK10439 | 411 | enterobactin/ferric enterobactin esterase; Provisi | 98.47 | |
| PF05705 | 240 | DUF829: Eukaryotic protein of unknown function (DU | 98.47 | |
| COG1075 | 336 | LipA Predicted acetyltransferases and hydrolases w | 98.46 | |
| cd00312 | 493 | Esterase_lipase Esterases and lipases (includes fu | 98.45 | |
| COG1505 | 648 | Serine proteases of the peptidase family S9A [Amin | 98.44 | |
| COG4814 | 288 | Uncharacterized protein with an alpha/beta hydrola | 98.43 | |
| PF08386 | 103 | Abhydrolase_4: TAP-like protein; InterPro: IPR0135 | 98.42 | |
| KOG3847 | 399 | consensus Phospholipase A2 (platelet-activating fa | 98.39 | |
| KOG1551 | 371 | consensus Uncharacterized conserved protein [Funct | 98.31 | |
| KOG2237 | 712 | consensus Predicted serine protease [Posttranslati | 98.26 | |
| COG1073 | 299 | Hydrolases of the alpha/beta superfamily [General | 98.25 | |
| COG4782 | 377 | Uncharacterized protein conserved in bacteria [Fun | 98.23 | |
| PF05057 | 217 | DUF676: Putative serine esterase (DUF676); InterPr | 98.21 | |
| PLN02213 | 319 | sinapoylglucose-malate O-sinapoyltransferase/ carb | 98.21 | |
| COG1770 | 682 | PtrB Protease II [Amino acid transport and metabol | 98.18 | |
| PF00756 | 251 | Esterase: Putative esterase; InterPro: IPR000801 T | 98.18 | |
| PF00135 | 535 | COesterase: Carboxylesterase family The prints ent | 98.07 | |
| COG3946 | 456 | VirJ Type IV secretory pathway, VirJ component [In | 98.05 | |
| KOG3724 | 973 | consensus Negative regulator of COPII vesicle form | 97.94 | |
| COG2272 | 491 | PnbA Carboxylesterase type B [Lipid metabolism] | 97.91 | |
| PF05577 | 434 | Peptidase_S28: Serine carboxypeptidase S28; InterP | 97.91 | |
| KOG3101 | 283 | consensus Esterase D [General function prediction | 97.91 | |
| COG2382 | 299 | Fes Enterochelin esterase and related enzymes [Ino | 97.91 | |
| KOG3967 | 297 | consensus Uncharacterized conserved protein [Funct | 97.86 | |
| PF02089 | 279 | Palm_thioest: Palmitoyl protein thioesterase; Inte | 97.84 | |
| PF02450 | 389 | LCAT: Lecithin:cholesterol acyltransferase; InterP | 97.84 | |
| COG0627 | 316 | Predicted esterase [General function prediction on | 97.79 | |
| PLN02606 | 306 | palmitoyl-protein thioesterase | 97.68 | |
| cd00741 | 153 | Lipase Lipase. Lipases are esterases that can hydr | 97.67 | |
| KOG2182 | 514 | consensus Hydrolytic enzymes of the alpha/beta hyd | 97.67 | |
| PLN02633 | 314 | palmitoyl protein thioesterase family protein | 97.65 | |
| KOG2541 | 296 | consensus Palmitoyl protein thioesterase [Lipid tr | 97.56 | |
| PF11144 | 403 | DUF2920: Protein of unknown function (DUF2920); In | 97.49 | |
| PF01764 | 140 | Lipase_3: Lipase (class 3); InterPro: IPR002921 Tr | 97.47 | |
| COG4553 | 415 | DepA Poly-beta-hydroxyalkanoate depolymerase [Lipi | 97.44 | |
| KOG2183 | 492 | consensus Prolylcarboxypeptidase (angiotensinase C | 97.4 | |
| PF04083 | 63 | Abhydro_lipase: Partial alpha/beta-hydrolase lipas | 97.25 | |
| COG2819 | 264 | Predicted hydrolase of the alpha/beta superfamily | 97.22 | |
| PF11187 | 224 | DUF2974: Protein of unknown function (DUF2974); In | 97.17 | |
| COG4287 | 507 | PqaA PhoPQ-activated pathogenicity-related protein | 97.13 | |
| KOG1516 | 545 | consensus Carboxylesterase and related proteins [G | 97.02 | |
| PF07082 | 250 | DUF1350: Protein of unknown function (DUF1350); In | 96.99 | |
| cd00519 | 229 | Lipase_3 Lipase (class 3). Lipases are esterases t | 96.98 | |
| PLN02162 | 475 | triacylglycerol lipase | 96.93 | |
| PLN00413 | 479 | triacylglycerol lipase | 96.85 | |
| COG2939 | 498 | Carboxypeptidase C (cathepsin A) [Amino acid trans | 96.84 | |
| PLN02517 | 642 | phosphatidylcholine-sterol O-acyltransferase | 96.71 | |
| PLN02454 | 414 | triacylglycerol lipase | 96.67 | |
| PLN02571 | 413 | triacylglycerol lipase | 96.59 | |
| PF01083 | 179 | Cutinase: Cutinase; InterPro: IPR000675 Aerial pla | 96.55 | |
| PF06259 | 177 | Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR | 96.54 | |
| PF11288 | 207 | DUF3089: Protein of unknown function (DUF3089); In | 96.42 | |
| PLN02408 | 365 | phospholipase A1 | 96.33 | |
| PLN02934 | 515 | triacylglycerol lipase | 96.18 | |
| PLN02310 | 405 | triacylglycerol lipase | 96.17 | |
| KOG2369 | 473 | consensus Lecithin:cholesterol acyltransferase (LC | 96.15 | |
| COG2830 | 214 | Uncharacterized protein conserved in bacteria [Fun | 96.08 | |
| PLN02324 | 415 | triacylglycerol lipase | 95.96 | |
| PF06850 | 202 | PHB_depo_C: PHB de-polymerase C-terminus; InterPro | 95.94 | |
| PF07519 | 474 | Tannase: Tannase and feruloyl esterase; InterPro: | 95.94 | |
| PF05277 | 345 | DUF726: Protein of unknown function (DUF726); Inte | 95.86 | |
| TIGR03712 | 511 | acc_sec_asp2 accessory Sec system protein Asp2. Th | 95.81 | |
| PLN02802 | 509 | triacylglycerol lipase | 95.78 | |
| KOG2521 | 350 | consensus Uncharacterized conserved protein [Funct | 95.75 | |
| KOG1283 | 414 | consensus Serine carboxypeptidases [Posttranslatio | 95.7 | |
| PLN02753 | 531 | triacylglycerol lipase | 95.67 | |
| PLN03037 | 525 | lipase class 3 family protein; Provisional | 95.52 | |
| PLN02719 | 518 | triacylglycerol lipase | 95.5 | |
| PLN02761 | 527 | lipase class 3 family protein | 95.37 | |
| PF05576 | 448 | Peptidase_S37: PS-10 peptidase S37; InterPro: IPR0 | 95.18 | |
| KOG4372 | 405 | consensus Predicted alpha/beta hydrolase [General | 94.89 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 94.85 | |
| PLN02847 | 633 | triacylglycerol lipase | 94.72 | |
| PF06441 | 112 | EHN: Epoxide hydrolase N terminus; InterPro: IPR01 | 94.72 | |
| KOG4569 | 336 | consensus Predicted lipase [Lipid transport and me | 94.69 | |
| PF08237 | 225 | PE-PPE: PE-PPE domain; InterPro: IPR013228 The hum | 93.87 | |
| KOG2029 | 697 | consensus Uncharacterized conserved protein [Funct | 92.88 | |
| COG4947 | 227 | Uncharacterized protein conserved in bacteria [Fun | 92.81 | |
| KOG4388 | 880 | consensus Hormone-sensitive lipase HSL [Lipid tran | 90.91 | |
| KOG4540 | 425 | consensus Putative lipase essential for disintegra | 90.83 | |
| COG5153 | 425 | CVT17 Putative lipase essential for disintegration | 90.83 | |
| PF07519 | 474 | Tannase: Tannase and feruloyl esterase; InterPro: | 88.3 | |
| KOG2385 | 633 | consensus Uncharacterized conserved protein [Funct | 86.58 | |
| COG3933 | 470 | Transcriptional antiterminator [Transcription] | 81.21 |
| >TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-39 Score=255.88 Aligned_cols=301 Identities=65% Similarity=1.149 Sum_probs=194.7
Q ss_pred CccceeEeCCCceEEEEeCCCCCCCcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHH
Q 020064 22 YSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLID 101 (331)
Q Consensus 22 ~~~~~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~ 101 (331)
....++...+|.+++|...|++++++|||+||++++..++.....+...+|+|+++|+||||.|........++.+++++
T Consensus 4 ~~~~~~~~~~~~~l~y~~~g~~~~~~lvllHG~~~~~~~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 83 (306)
T TIGR01249 4 FVSGYLNVSDNHQLYYEQSGNPDGKPVVFLHGGPGSGTDPGCRRFFDPETYRIVLFDQRGCGKSTPHACLEENTTWDLVA 83 (306)
T ss_pred ccCCeEEcCCCcEEEEEECcCCCCCEEEEECCCCCCCCCHHHHhccCccCCEEEEECCCCCCCCCCCCCcccCCHHHHHH
Confidence 35678999999999999999767889999999877655544444555578999999999999998654333567889999
Q ss_pred HHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcch
Q 020064 102 DIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENE 181 (331)
Q Consensus 102 ~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (331)
|+..+++.++.++++++||||||.+++.++.++|++++++|++++.........+....+.....+..|..+...++...
T Consensus 84 dl~~l~~~l~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (306)
T TIGR01249 84 DIEKLREKLGIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFLLREKEWSWFYEGGASMIYPDAWQRFMDSIPENE 163 (306)
T ss_pred HHHHHHHHcCCCCEEEEEECHHHHHHHHHHHHChHhhhhheeeccccCCHHHHHHHHhcchhhhCHHHHHHHhhhCChhh
Confidence 99999999999999999999999999999999999999999999866543322222222222233344444443333322
Q ss_pred h-hhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhh
Q 020064 182 R-SCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDN 260 (331)
Q Consensus 182 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (331)
. ..+...+...+..............+..|.. .......+..............+......+.....+..........
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (306)
T TIGR01249 164 RNEQLVNAYHDRLQSGDEETKLAAAKAWVDWES-TTLLRPINEIVSTAEDFKFSLAFARLENHYFVNKGFLDVENFILDN 242 (306)
T ss_pred hhccHHHHHHHHccCCCHHHHHHHHHHHHHHhC-hhhcCCCCCccccccchHHHHHHHHHHHhHHHHhchhcCchHHHHh
Confidence 2 3344444444433333222222233332221 0111111111111111112222222222222222222212334556
Q ss_pred ccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHH
Q 020064 261 IDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKL 323 (331)
Q Consensus 261 l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~f 323 (331)
+.++.++|+|+|+|++|.++|.+.++.+++.++++++++++++||.++.++..+.+.+.+.+|
T Consensus 243 ~~~i~~~P~lii~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~i~~~~~~~ 305 (306)
T TIGR01249 243 ISKIRNIPTYIVHGRYDLCCPLQSAWALHKAFPEAELKVTNNAGHSAFDPNNLAALVHALETY 305 (306)
T ss_pred hhhccCCCeEEEecCCCCCCCHHHHHHHHHhCCCCEEEEECCCCCCCCChHHHHHHHHHHHHh
Confidence 677734999999999999999999999999999999999999999997665555555555555
|
This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members. |
| >PLN02824 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-37 Score=244.68 Aligned_cols=277 Identities=16% Similarity=0.131 Sum_probs=171.4
Q ss_pred CCccceeEeCCCceEEEEeCCCCCCCcEEEeccCCCCCCCCC-cccccCCCCcEEEEecCCCCCCCCCCCC-----CCcc
Q 020064 21 PYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPS-NRRFFDPDFYRIILFDQRGAGKSTPHAC-----LDQN 94 (331)
Q Consensus 21 ~~~~~~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~~~~-~~~~~~~~g~~vi~~D~~G~G~s~~~~~-----~~~~ 94 (331)
..+.++++.. |.+++|...|+ ++++|||+||++++...|. .+..+ +..|+|+++|+||||.|+.+.. ...+
T Consensus 7 ~~~~~~~~~~-~~~i~y~~~G~-~~~~vlllHG~~~~~~~w~~~~~~L-~~~~~vi~~DlpG~G~S~~~~~~~~~~~~~~ 83 (294)
T PLN02824 7 QVETRTWRWK-GYNIRYQRAGT-SGPALVLVHGFGGNADHWRKNTPVL-AKSHRVYAIDLLGYGYSDKPNPRSAPPNSFY 83 (294)
T ss_pred CCCCceEEEc-CeEEEEEEcCC-CCCeEEEECCCCCChhHHHHHHHHH-HhCCeEEEEcCCCCCCCCCCccccccccccC
Confidence 3456677775 55999999885 3689999999877655554 44444 5668999999999999986531 1358
Q ss_pred chHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhh
Q 020064 95 TTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFR 174 (331)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (331)
+++++++|+.++++.++.++++++||||||.+++.+|.++|++|+++|++++......... ...........+.
T Consensus 84 ~~~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~------~~~~~~~~~~~~~ 157 (294)
T PLN02824 84 TFETWGEQLNDFCSDVVGDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKK------QPWLGRPFIKAFQ 157 (294)
T ss_pred CHHHHHHHHHHHHHHhcCCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccc------cchhhhHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999997543210000 0000000000000
Q ss_pred ccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcC----CccHHHHHHhhhhhhhhhccCC
Q 020064 175 DLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRG----EDDIFSLAFARIENHYFLNKGF 250 (331)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 250 (331)
..+.... ....+...... ...... .+. ..........++..... ........+... . .
T Consensus 158 ~~~~~~~---~~~~~~~~~~~--~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~----~ 219 (294)
T PLN02824 158 NLLRETA---VGKAFFKSVAT--PETVKN---ILC--QCYHDDSAVTDELVEAILRPGLEPGAVDVFLDF----I----S 219 (294)
T ss_pred HHHhchh---HHHHHHHhhcC--HHHHHH---HHH--HhccChhhccHHHHHHHHhccCCchHHHHHHHH----h----c
Confidence 0000000 00000000000 000000 000 00000000001000000 000000000000 0 0
Q ss_pred CCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHh
Q 020064 251 FPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNL 326 (331)
Q Consensus 251 ~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 326 (331)
........+.+.++ ++|+|+|+|++|.++|.+.++.+.+..+++++++++++||+++.++ |+++.+.|.+|+++
T Consensus 220 ~~~~~~~~~~l~~i-~~P~lvi~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~-p~~~~~~i~~fl~~ 293 (294)
T PLN02824 220 YSGGPLPEELLPAV-KCPVLIAWGEKDPWEPVELGRAYANFDAVEDFIVLPGVGHCPQDEA-PELVNPLIESFVAR 293 (294)
T ss_pred cccccchHHHHhhc-CCCeEEEEecCCCCCChHHHHHHHhcCCccceEEeCCCCCChhhhC-HHHHHHHHHHHHhc
Confidence 00011223567888 6999999999999999999999888888899999999999999997 99999999999976
|
|
| >PRK00870 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-36 Score=242.45 Aligned_cols=277 Identities=19% Similarity=0.196 Sum_probs=173.2
Q ss_pred CCCccceeEeCCC----ceEEEEeCCCCCCCcEEEeccCCCCCCC-CCcccccCCCCcEEEEecCCCCCCCCCCCCCCcc
Q 020064 20 EPYSTGILKVSDI----HTIYWEQSGNPTGHPVVFLHGGPGGGTT-PSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQN 94 (331)
Q Consensus 20 ~~~~~~~~~~~~g----~~l~~~~~g~~~~~~vl~~HG~~~~~~~-~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~ 94 (331)
.++..+++++.++ .+++|...|++++|+|||+||++++... ...+..+.++||+|+++|+||||.|..+.....+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~i~y~~~G~~~~~~lvliHG~~~~~~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~~~~ 96 (302)
T PRK00870 17 YPFAPHYVDVDDGDGGPLRMHYVDEGPADGPPVLLLHGEPSWSYLYRKMIPILAAAGHRVIAPDLIGFGRSDKPTRREDY 96 (302)
T ss_pred CCCCceeEeecCCCCceEEEEEEecCCCCCCEEEEECCCCCchhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCcccC
Confidence 4556778888762 5899999997678999999998766544 4455555557999999999999999865433457
Q ss_pred chHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhh
Q 020064 95 TTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFR 174 (331)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (331)
+++++++++.+++++++.++++++||||||.+++.+|.++|++++++|++++........... ....|..+.
T Consensus 97 ~~~~~a~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~--------~~~~~~~~~ 168 (302)
T PRK00870 97 TYARHVEWMRSWFEQLDLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGPMPD--------AFWAWRAFS 168 (302)
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCccccchH--------HHhhhhccc
Confidence 899999999999999999999999999999999999999999999999998743211100000 000011000
Q ss_pred ccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCc
Q 020064 175 DLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSD 254 (331)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (331)
...+.......... .......... ...+. . ...... .... . ..+........... .....
T Consensus 169 ~~~~~~~~~~~~~~---~~~~~~~~~~---~~~~~------~-~~~~~~-~~~~----~-~~~~~~~~~~~~~~-~~~~~ 228 (302)
T PRK00870 169 QYSPVLPVGRLVNG---GTVRDLSDAV---RAAYD------A-PFPDES-YKAG----A-RAFPLLVPTSPDDP-AVAAN 228 (302)
T ss_pred ccCchhhHHHHhhc---cccccCCHHH---HHHhh------c-ccCChh-hhcc----h-hhhhhcCCCCCCCc-chHHH
Confidence 00000000000000 0000000000 00000 0 000000 0000 0 00000000000000 00001
Q ss_pred chhhhhccccccccEEEEecCCCCccCCcchHHHHHhCCCCc---EEEecCCCCCCCcCCchhHHHHHHHHHHHhh
Q 020064 255 SFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEAD---FKVVADAGHSANEPGIAAELVATNEKLKNLI 327 (331)
Q Consensus 255 ~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~---~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 327 (331)
......+.++ ++|+++|+|++|.++|... +.+.+.+++++ +++++++||+++.++ |+++++.|.+|+++.
T Consensus 229 ~~~~~~l~~i-~~P~lii~G~~D~~~~~~~-~~~~~~~~~~~~~~~~~i~~~gH~~~~e~-p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 229 RAAWAVLERW-DKPFLTAFSDSDPITGGGD-AILQKRIPGAAGQPHPTIKGAGHFLQEDS-GEELAEAVLEFIRAT 301 (302)
T ss_pred HHHHHhhhcC-CCceEEEecCCCCcccCch-HHHHhhcccccccceeeecCCCccchhhC-hHHHHHHHHHHHhcC
Confidence 1233467888 6999999999999999866 88999898776 889999999999997 999999999999764
|
|
| >KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-36 Score=228.27 Aligned_cols=286 Identities=19% Similarity=0.211 Sum_probs=182.2
Q ss_pred CCCccceeEeCCCceEEEEeCCCCCCCcEEEeccCCCCCCCC-CcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHH
Q 020064 20 EPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTP-SNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWD 98 (331)
Q Consensus 20 ~~~~~~~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~~~-~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~ 98 (331)
...+.++++.++ .+++|.+.|+.++|.|+++||++.++..| .....+...||+|+|+|+||+|.|+.+.....|++..
T Consensus 20 ~~~~hk~~~~~g-I~~h~~e~g~~~gP~illlHGfPe~wyswr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~~~ 98 (322)
T KOG4178|consen 20 SAISHKFVTYKG-IRLHYVEGGPGDGPIVLLLHGFPESWYSWRHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEYTIDE 98 (322)
T ss_pred hhcceeeEEEcc-EEEEEEeecCCCCCEEEEEccCCccchhhhhhhhhhhhcceEEEecCCCCCCCCCCCCCcceeeHHH
Confidence 345566666665 69999999998999999999999886654 5566666788999999999999999998778899999
Q ss_pred HHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhcc--
Q 020064 99 LIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDL-- 176 (331)
Q Consensus 99 ~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 176 (331)
++.|+..++++++.++++++||+||+.+|+.+|..+|++|+++|.++.+...+.... .. .....+...+.....+
T Consensus 99 l~~di~~lld~Lg~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~~p~~~~-~~--~~~~~f~~~~y~~~fQ~~ 175 (322)
T KOG4178|consen 99 LVGDIVALLDHLGLKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFPNPKLKP-LD--SSKAIFGKSYYICLFQEP 175 (322)
T ss_pred HHHHHHHHHHHhccceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCCCcccch-hh--hhccccCccceeEecccc
Confidence 999999999999999999999999999999999999999999999998765211000 00 0000111111110000
Q ss_pred ------CCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhh----hhhhhh
Q 020064 177 ------IPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARI----ENHYFL 246 (331)
Q Consensus 177 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 246 (331)
+.....+.+...+...-..... ........++.++...+...+...+..- ..+++.
T Consensus 176 ~~~E~~~s~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~w~t~edi~~~~~~f~~~g~~gplNyyr 241 (322)
T KOG4178|consen 176 GKPETELSKDDTEMLVKTFRTRKTPGPL--------------IVPKQPNENPLWLTEEDIAFYVSKFQIDGFTGPLNYYR 241 (322)
T ss_pred CcchhhhccchhHHhHHhhhccccCCcc--------------ccCCCCCCccchhhHHHHHHHHhccccccccccchhhH
Confidence 0000000111111000000000 0000000001111111111111111110 011111
Q ss_pred ccCCCCCcc-hhhhhccccccccEEEEecCCCCccCCc-chHHHHHhCCCC-cEEEecCCCCCCCcCCchhHHHHHHHHH
Q 020064 247 NKGFFPSDS-FLLDNIDNIRHINATIVQGRYDVCCPMM-SAWDLHKAWPEA-DFKVVADAGHSANEPGIAAELVATNEKL 323 (331)
Q Consensus 247 ~~~~~~~~~-~~~~~l~~i~~~P~l~i~G~~D~~~~~~-~~~~~~~~~~~~-~~~~~~~~gH~~~~~~~~~~~~~~i~~f 323 (331)
+... .+ ...-.+.++ ++|+++|+|+.|.+.+.. ..+.+.+.+|+. +.++++|+||++++|+ |+++.+.|.+|
T Consensus 242 n~~r---~w~a~~~~~~~i-~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~l~~~vv~~~~gH~vqqe~-p~~v~~~i~~f 316 (322)
T KOG4178|consen 242 NFRR---NWEAAPWALAKI-TIPVLFIWGDLDPVLPYPIFGELYRKDVPRLTERVVIEGIGHFVQQEK-PQEVNQAILGF 316 (322)
T ss_pred HHhh---Cchhcccccccc-ccceEEEEecCcccccchhHHHHHHHhhccccceEEecCCcccccccC-HHHHHHHHHHH
Confidence 1100 11 123367788 699999999999998865 556666667776 7888999999999998 99999999999
Q ss_pred HHhhh
Q 020064 324 KNLIK 328 (331)
Q Consensus 324 l~~~~ 328 (331)
+++..
T Consensus 317 ~~~~~ 321 (322)
T KOG4178|consen 317 INSFS 321 (322)
T ss_pred HHhhc
Confidence 98753
|
|
| >TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-36 Score=239.87 Aligned_cols=261 Identities=15% Similarity=0.120 Sum_probs=168.7
Q ss_pred cceeEeCCCceEEEEeC-CCCCCCcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHH
Q 020064 24 TGILKVSDIHTIYWEQS-GNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDD 102 (331)
Q Consensus 24 ~~~~~~~~g~~l~~~~~-g~~~~~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~ 102 (331)
.+++++++. +++|... |.+++++|||+||++++...|......+.++|+|+++|+||||.|+.+. ..+++++++++
T Consensus 4 ~~~~~~~~~-~~~~~~~~~~~~~~plvllHG~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~--~~~~~~~~~~~ 80 (276)
T TIGR02240 4 FRTIDLDGQ-SIRTAVRPGKEGLTPLLIFNGIGANLELVFPFIEALDPDLEVIAFDVPGVGGSSTPR--HPYRFPGLAKL 80 (276)
T ss_pred EEEeccCCc-EEEEEEecCCCCCCcEEEEeCCCcchHHHHHHHHHhccCceEEEECCCCCCCCCCCC--CcCcHHHHHHH
Confidence 345666554 8999775 3334579999999777655554444445678999999999999998654 36789999999
Q ss_pred HHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhc---cCCc
Q 020064 103 IEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRD---LIPE 179 (331)
Q Consensus 103 ~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 179 (331)
+.++++.++.++++|+||||||.+++.+|.++|++++++|+++++........ .+..+..... .+..
T Consensus 81 ~~~~i~~l~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~ 150 (276)
T TIGR02240 81 AARMLDYLDYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPG----------KPKVLMMMASPRRYIQP 150 (276)
T ss_pred HHHHHHHhCcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCC----------chhHHHHhcCchhhhcc
Confidence 99999999999999999999999999999999999999999998764210000 0000000000 0000
Q ss_pred chhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhh
Q 020064 180 NERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLD 259 (331)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (331)
.........+........... ...+ ... .............. ... ..+..+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~----~~~~------~~~------~~~~~~~~~~~~~~--------~~~-----~~~~~~ 201 (276)
T TIGR02240 151 SHGIHIAPDIYGGAFRRDPEL----AMAH------ASK------VRSGGKLGYYWQLF--------AGL-----GWTSIH 201 (276)
T ss_pred ccccchhhhhccceeeccchh----hhhh------hhh------cccCCCchHHHHHH--------HHc-----CCchhh
Confidence 000000000000000000000 0000 000 00000000000000 000 112234
Q ss_pred hccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhhhc
Q 020064 260 NIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNLIKN 329 (331)
Q Consensus 260 ~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~~ 329 (331)
.+.++ ++|+|+|+|++|+++|++.++.+.+.+|++++++++ +||+++.++ |+++++.|.+|+++...
T Consensus 202 ~l~~i-~~P~lii~G~~D~~v~~~~~~~l~~~~~~~~~~~i~-~gH~~~~e~-p~~~~~~i~~fl~~~~~ 268 (276)
T TIGR02240 202 WLHKI-QQPTLVLAGDDDPIIPLINMRLLAWRIPNAELHIID-DGHLFLITR-AEAVAPIIMKFLAEERQ 268 (276)
T ss_pred HhhcC-CCCEEEEEeCCCCcCCHHHHHHHHHhCCCCEEEEEc-CCCchhhcc-HHHHHHHHHHHHHHhhh
Confidence 57889 699999999999999999999999999999999997 599999997 99999999999988754
|
This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid. |
| >PRK03592 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-36 Score=239.24 Aligned_cols=276 Identities=15% Similarity=0.155 Sum_probs=166.4
Q ss_pred ccceeEeCCCceEEEEeCCCCCCCcEEEeccCCCCCCCCC-cccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHH
Q 020064 23 STGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPS-NRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLID 101 (331)
Q Consensus 23 ~~~~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~~~~-~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~ 101 (331)
+..++++ +|.+++|...| ++++|||+||++++...|. .+..+ .+.|+||++|+||||.|+.+. ..++++++++
T Consensus 8 ~~~~~~~-~g~~i~y~~~G--~g~~vvllHG~~~~~~~w~~~~~~L-~~~~~via~D~~G~G~S~~~~--~~~~~~~~a~ 81 (295)
T PRK03592 8 EMRRVEV-LGSRMAYIETG--EGDPIVFLHGNPTSSYLWRNIIPHL-AGLGRCLAPDLIGMGASDKPD--IDYTFADHAR 81 (295)
T ss_pred cceEEEE-CCEEEEEEEeC--CCCEEEEECCCCCCHHHHHHHHHHH-hhCCEEEEEcCCCCCCCCCCC--CCCCHHHHHH
Confidence 4455665 55699999998 5789999999877765554 44444 445699999999999998765 3579999999
Q ss_pred HHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccC-Ccc
Q 020064 102 DIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLI-PEN 180 (331)
Q Consensus 102 ~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 180 (331)
|+..+++.++.++++++||||||.+++.++.++|++|+++|++++......... + .......+..+.... ...
T Consensus 82 dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~~~ 155 (295)
T PRK03592 82 YLDAWFDALGLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDD-F-----PPAVRELFQALRSPGEGEE 155 (295)
T ss_pred HHHHHHHHhCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhh-c-----chhHHHHHHHHhCcccccc
Confidence 999999999999999999999999999999999999999999998433210000 0 000000000000000 000
Q ss_pred h---hhhhHHhhccccCCCc-hHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcch
Q 020064 181 E---RSCFVDAYSKRLNSDD-KETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSF 256 (331)
Q Consensus 181 ~---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (331)
. ...+...+........ ..... ..+. .. ...+... ................ ........+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~------~~-~~~~~~~-----~~~~~~~~~~~~~~~~-~~~~~~~~~ 219 (295)
T PRK03592 156 MVLEENVFIERVLPGSILRPLSDEEM---AVYR------RP-FPTPESR-----RPTLSWPRELPIDGEP-ADVVALVEE 219 (295)
T ss_pred cccchhhHHhhcccCcccccCCHHHH---HHHH------hh-cCCchhh-----hhhhhhhhhcCCCCcc-hhhHhhhhH
Confidence 0 0000111111000000 00000 0000 00 0000000 0000000000000000 000000112
Q ss_pred hhhhccccccccEEEEecCCCCccCCcchHHH-HHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhhh
Q 020064 257 LLDNIDNIRHINATIVQGRYDVCCPMMSAWDL-HKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNLIK 328 (331)
Q Consensus 257 ~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~-~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~ 328 (331)
....+.++ ++|+|+|+|++|.++++....++ .+..+++++++++++||+++.++ |+++++.|.+|+++..
T Consensus 220 ~~~~l~~i-~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~-p~~v~~~i~~fl~~~~ 290 (295)
T PRK03592 220 YAQWLATS-DVPKLLINAEPGAILTTGAIRDWCRSWPNQLEITVFGAGLHFAQEDS-PEEIGAAIAAWLRRLR 290 (295)
T ss_pred hHHHhccC-CCCeEEEeccCCcccCcHHHHHHHHHhhhhcceeeccCcchhhhhcC-HHHHHHHHHHHHHHhc
Confidence 33457788 69999999999999965555455 45568999999999999999997 9999999999998763
|
|
| >PLN02679 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-35 Score=240.97 Aligned_cols=277 Identities=18% Similarity=0.176 Sum_probs=167.2
Q ss_pred ceeEeCCCceEEEEeCCCC----CCCcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHH
Q 020064 25 GILKVSDIHTIYWEQSGNP----TGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLI 100 (331)
Q Consensus 25 ~~~~~~~g~~l~~~~~g~~----~~~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~ 100 (331)
++++..+..+++|...|++ ++|+|||+||++++...|......+.++|+|+++|+||||.|+.+.. ..+++++++
T Consensus 64 ~~~~~~g~~~i~Y~~~G~g~~~~~gp~lvllHG~~~~~~~w~~~~~~L~~~~~via~Dl~G~G~S~~~~~-~~~~~~~~a 142 (360)
T PLN02679 64 KKWKWKGEYSINYLVKGSPEVTSSGPPVLLVHGFGASIPHWRRNIGVLAKNYTVYAIDLLGFGASDKPPG-FSYTMETWA 142 (360)
T ss_pred ceEEECCceeEEEEEecCcccCCCCCeEEEECCCCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCCCCC-ccccHHHHH
Confidence 4555554449999998864 45899999998776554443333345689999999999999986542 357899999
Q ss_pred HHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHh-CCCceeeEEEeccccchhhhh---hhHhhcccccCChhhHH-hhhc
Q 020064 101 DDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLA-HPDKVTGLVLRGIFLLRKKEI---DWFYEGGAAAIYPDAWE-SFRD 175 (331)
Q Consensus 101 ~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~-~p~~v~~li~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-~~~~ 175 (331)
+++.++++.++.++++|+||||||.+++.++.. +|++|+++|++++........ .+... ...+..+. .+..
T Consensus 143 ~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 218 (360)
T PLN02679 143 ELILDFLEEVVQKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIK----LLLPLLWLIDFLL 218 (360)
T ss_pred HHHHHHHHHhcCCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHh----hhcchHHHHHHHh
Confidence 999999999999999999999999999998874 799999999999864321100 00000 00000000 0000
Q ss_pred cCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhc----CCccHHHHHHhhhhhhhhhccCCC
Q 020064 176 LIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKR----GEDDIFSLAFARIENHYFLNKGFF 251 (331)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 251 (331)
..+. ....+........ ... ..... .........++.... .........+... .. .
T Consensus 219 ~~~~-----~~~~~~~~~~~~~-~~~-~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~--~-- 278 (360)
T PLN02679 219 KQRG-----IASALFNRVKQRD-NLK-NILLS-----VYGNKEAVDDELVEIIRGPADDEGALDAFVSI----VT--G-- 278 (360)
T ss_pred hchh-----hHHHHHHHhcCHH-HHH-HHHHH-----hccCcccCCHHHHHHHHhhccCCChHHHHHHH----Hh--c--
Confidence 0000 0000000000000 000 00000 000000000000000 0000000000000 00 0
Q ss_pred CCcchhhhhccccccccEEEEecCCCCccCCcc-----hHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHh
Q 020064 252 PSDSFLLDNIDNIRHINATIVQGRYDVCCPMMS-----AWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNL 326 (331)
Q Consensus 252 ~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~-----~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 326 (331)
....+....+.++ ++|+|+|+|++|.++|++. .+.+.+.+|++++++++++||+++.|+ |+++++.|.+|+++
T Consensus 279 ~~~~~~~~~l~~i-~~PtLii~G~~D~~~p~~~~~~~~~~~l~~~ip~~~l~~i~~aGH~~~~E~-Pe~~~~~I~~FL~~ 356 (360)
T PLN02679 279 PPGPNPIKLIPRI-SLPILVLWGDQDPFTPLDGPVGKYFSSLPSQLPNVTLYVLEGVGHCPHDDR-PDLVHEKLLPWLAQ 356 (360)
T ss_pred CCCCCHHHHhhhc-CCCEEEEEeCCCCCcCchhhHHHHHHhhhccCCceEEEEcCCCCCCccccC-HHHHHHHHHHHHHh
Confidence 0022334567889 5999999999999999863 235666789999999999999999997 99999999999987
Q ss_pred hh
Q 020064 327 IK 328 (331)
Q Consensus 327 ~~ 328 (331)
+.
T Consensus 357 ~~ 358 (360)
T PLN02679 357 LP 358 (360)
T ss_pred cC
Confidence 64
|
|
| >TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-35 Score=235.30 Aligned_cols=266 Identities=22% Similarity=0.260 Sum_probs=165.1
Q ss_pred ccceeEeC-C---CceEEEEeCCCCCCCcEEEeccCCCCCCCC----CcccccCCCCcEEEEecCCCCCCCCCCCCCCcc
Q 020064 23 STGILKVS-D---IHTIYWEQSGNPTGHPVVFLHGGPGGGTTP----SNRRFFDPDFYRIILFDQRGAGKSTPHACLDQN 94 (331)
Q Consensus 23 ~~~~~~~~-~---g~~l~~~~~g~~~~~~vl~~HG~~~~~~~~----~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~ 94 (331)
+.+++.++ + +.+++|...| ++|+|||+||++.+...| ..+..+++.||+|+++|+||||.|+........
T Consensus 6 ~~~~~~~~~~~~~~~~~~y~~~g--~~~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~ 83 (282)
T TIGR03343 6 TSKFVKINEKGLSNFRIHYNEAG--NGEAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQR 83 (282)
T ss_pred cceEEEcccccccceeEEEEecC--CCCeEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcccc
Confidence 34555553 2 4579999888 578999999976654332 234556678999999999999999865321112
Q ss_pred chHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCCh-hhHHhh
Q 020064 95 TTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYP-DAWESF 173 (331)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 173 (331)
+ ..+++++.++++.++.++++++||||||.+++.+|.++|++++++|++++......... ..+ ..+...
T Consensus 84 ~-~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~---------~~~~~~~~~~ 153 (282)
T TIGR03343 84 G-LVNARAVKGLMDALDIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFA---------PMPMEGIKLL 153 (282)
T ss_pred c-chhHHHHHHHHHHcCCCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCccccc---------cCchHHHHHH
Confidence 2 25689999999999999999999999999999999999999999999987532110000 000 000000
Q ss_pred hccCCcchhhhhHHhhccccCCCchHHHHHHHH-HhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCC
Q 020064 174 RDLIPENERSCFVDAYSKRLNSDDKETQYAAAR-AWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFP 252 (331)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (331)
........... ...+................. .|.. . ...+.. ...+... ......
T Consensus 154 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~---~----~~~~~~---------~~~~~~~-----~~~~~~- 210 (282)
T TIGR03343 154 FKLYAEPSYET-LKQMLNVFLFDQSLITEELLQGRWEN---I----QRQPEH---------LKNFLIS-----SQKAPL- 210 (282)
T ss_pred HHHhcCCCHHH-HHHHHhhCccCcccCcHHHHHhHHHH---h----hcCHHH---------HHHHHHh-----cccccc-
Confidence 00000000000 000000000000000000000 0000 0 000000 0000000 000000
Q ss_pred CcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHH
Q 020064 253 SDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKN 325 (331)
Q Consensus 253 ~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~ 325 (331)
...+....+.++ ++|+|+++|++|.+++++.++++.+.+|++++++++++||+++.++ |+.+.+.|.+|++
T Consensus 211 ~~~~~~~~l~~i-~~Pvlli~G~~D~~v~~~~~~~~~~~~~~~~~~~i~~agH~~~~e~-p~~~~~~i~~fl~ 281 (282)
T TIGR03343 211 STWDVTARLGEI-KAKTLVTWGRDDRFVPLDHGLKLLWNMPDAQLHVFSRCGHWAQWEH-ADAFNRLVIDFLR 281 (282)
T ss_pred ccchHHHHHhhC-CCCEEEEEccCCCcCCchhHHHHHHhCCCCEEEEeCCCCcCCcccC-HHHHHHHHHHHhh
Confidence 123345678889 6999999999999999999999999999999999999999999997 9999999999986
|
Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself. |
| >PRK06489 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-35 Score=237.62 Aligned_cols=271 Identities=16% Similarity=0.147 Sum_probs=163.8
Q ss_pred CCCceEEEEeCCCCC-------CCcEEEeccCCCCCC-CC--Ccc-------cccCCCCcEEEEecCCCCCCCCCCCCC-
Q 020064 30 SDIHTIYWEQSGNPT-------GHPVVFLHGGPGGGT-TP--SNR-------RFFDPDFYRIILFDQRGAGKSTPHACL- 91 (331)
Q Consensus 30 ~~g~~l~~~~~g~~~-------~~~vl~~HG~~~~~~-~~--~~~-------~~~~~~g~~vi~~D~~G~G~s~~~~~~- 91 (331)
-+|.+++|...|+++ +|+|||+||++++.. |+ .+. ..++.++|+||++|+||||.|+.+...
T Consensus 47 ~~g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~~ 126 (360)
T PRK06489 47 LPELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDGL 126 (360)
T ss_pred cCCceEEEEecCCCCcccccCCCCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcCC
Confidence 456799999999654 789999999877643 33 121 233468899999999999999865421
Q ss_pred ----CccchHHHHHHHHHH-HHHhCCCcEE-EEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccC
Q 020064 92 ----DQNTTWDLIDDIEKL-RQHLEIPEWQ-VFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAI 165 (331)
Q Consensus 92 ----~~~~~~~~~~~~~~~-~~~~~~~~v~-lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~ 165 (331)
..++++++++++..+ ++++++++++ ++||||||.+++.+|.++|++|+++|++++.........+.....
T Consensus 127 ~~~~~~~~~~~~a~~~~~~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~~~~~~~~~~~~~---- 202 (360)
T PRK06489 127 RAAFPRYDYDDMVEAQYRLVTEGLGVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQPTEMSGRNWMWRRM---- 202 (360)
T ss_pred CCCCCcccHHHHHHHHHHHHHHhcCCCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCcccccHHHHHHHHH----
Confidence 147889999998875 5889999985 899999999999999999999999999987542111000000000
Q ss_pred ChhhHHhhhcc----CC--cchhhhhHHhhccccCCCchHHH------HHHHHHhhhHHHhhhcCCCChhhhhcCCccHH
Q 020064 166 YPDAWESFRDL----IP--ENERSCFVDAYSKRLNSDDKETQ------YAAARAWTKWEMMTAHLLPNEENIKRGEDDIF 233 (331)
Q Consensus 166 ~~~~~~~~~~~----~~--~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (331)
....+...... .. ..........+ ........... ......+... .... ........+
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--------~~~~~~~~~ 272 (360)
T PRK06489 203 LIESIRNDPAWNNGNYTTQPPSLKRANPMF-AIATSGGTLAYQAQAPTRAAADKLVDE-RLAA--------PVTADANDF 272 (360)
T ss_pred HHHHHHhCCCCCCCCCCCCHHHHHHHHHHH-HHHHhCCHHHHHHhcCChHHHHHHHHH-HHHh--------hhhcCHHHH
Confidence 00000000000 00 00000000000 00000000000 0000000000 0000 000000000
Q ss_pred HHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCCCccCCcch--HHHHHhCCCCcEEEecCC----CCCC
Q 020064 234 SLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSA--WDLHKAWPEADFKVVADA----GHSA 307 (331)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~--~~~~~~~~~~~~~~~~~~----gH~~ 307 (331)
...+.. .. ..+..+.+.+| ++|+|+|+|++|.++|++.+ +.+.+.+|++++++++++ ||.+
T Consensus 273 ~~~~~~-----------~~-~~d~~~~L~~I-~~PvLvI~G~~D~~~p~~~~~~~~la~~ip~a~l~~i~~a~~~~GH~~ 339 (360)
T PRK06489 273 LYQWDS-----------SR-DYNPSPDLEKI-KAPVLAINSADDERNPPETGVMEAALKRVKHGRLVLIPASPETRGHGT 339 (360)
T ss_pred HHHHHH-----------hh-ccChHHHHHhC-CCCEEEEecCCCcccChhhHHHHHHHHhCcCCeEEEECCCCCCCCccc
Confidence 000000 00 23455688899 69999999999999998875 789999999999999996 9999
Q ss_pred CcCCchhHHHHHHHHHHHhhhc
Q 020064 308 NEPGIAAELVATNEKLKNLIKN 329 (331)
Q Consensus 308 ~~~~~~~~~~~~i~~fl~~~~~ 329 (331)
+ ++ |+++.+.|.+|++.+.+
T Consensus 340 ~-e~-P~~~~~~i~~FL~~~~~ 359 (360)
T PRK06489 340 T-GS-AKFWKAYLAEFLAQVPK 359 (360)
T ss_pred c-cC-HHHHHHHHHHHHHhccc
Confidence 7 65 99999999999988753
|
|
| >PRK03204 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-34 Score=227.65 Aligned_cols=268 Identities=18% Similarity=0.217 Sum_probs=166.1
Q ss_pred CCCCCccceeEeCCCceEEEEeCCCCCCCcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchH
Q 020064 18 YVEPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTW 97 (331)
Q Consensus 18 ~~~~~~~~~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~ 97 (331)
...+.+..++++.++ +++|...| ++++|||+||++.+...|......+.++|+|+++|+||||.|+.+.. ..++.+
T Consensus 10 ~~~~~~~~~~~~~~~-~i~y~~~G--~~~~iv~lHG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~-~~~~~~ 85 (286)
T PRK03204 10 QLYPFESRWFDSSRG-RIHYIDEG--TGPPILLCHGNPTWSFLYRDIIVALRDRFRCVAPDYLGFGLSERPSG-FGYQID 85 (286)
T ss_pred ccccccceEEEcCCc-EEEEEECC--CCCEEEEECCCCccHHHHHHHHHHHhCCcEEEEECCCCCCCCCCCCc-cccCHH
Confidence 345677788888665 99999988 57899999998765544444444456789999999999999986543 257889
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccC
Q 020064 98 DLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLI 177 (331)
Q Consensus 98 ~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (331)
++++++.++++.++.++++++||||||.+++.++..+|++|+++|++++........ ....+.......
T Consensus 86 ~~~~~~~~~~~~~~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~-----------~~~~~~~~~~~~ 154 (286)
T PRK03204 86 EHARVIGEFVDHLGLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPADTL-----------AMKAFSRVMSSP 154 (286)
T ss_pred HHHHHHHHHHHHhCCCCEEEEEECccHHHHHHHHHhChhheeEEEEECccccCCCch-----------hHHHHHHHhccc
Confidence 999999999999999999999999999999999999999999999987653211000 000011000000
Q ss_pred Ccch----hhhhHHhhccccC-CCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCC
Q 020064 178 PENE----RSCFVDAYSKRLN-SDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFP 252 (331)
Q Consensus 178 ~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (331)
.... ...+...+..... ...... ....+ .. ....+ .....+......+......
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~------~~-~~~~~---------~~~~~~~~~~~~~~~~~~~-- 213 (286)
T PRK03204 155 PVQYAILRRNFFVERLIPAGTEHRPSSA---VMAHY------RA-VQPNA---------AARRGVAEMPKQILAARPL-- 213 (286)
T ss_pred cchhhhhhhhHHHHHhccccccCCCCHH---HHHHh------cC-CCCCH---------HHHHHHHHHHHhcchhhHH--
Confidence 0000 0000011100000 000000 00000 00 00000 0000000000000000000
Q ss_pred Ccchhhhhcc--ccccccEEEEecCCCCccCCc-chHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHH
Q 020064 253 SDSFLLDNID--NIRHINATIVQGRYDVCCPMM-SAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLK 324 (331)
Q Consensus 253 ~~~~~~~~l~--~i~~~P~l~i~G~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl 324 (331)
..+....+. .+ ++|+|+|+|++|.++++. ..+.+.+.+|++++++++++||+++.++ |+++.+.|.+|+
T Consensus 214 -~~~~~~~~~~~~~-~~PtliI~G~~D~~~~~~~~~~~~~~~ip~~~~~~i~~aGH~~~~e~-Pe~~~~~i~~~~ 285 (286)
T PRK03204 214 -LARLAREVPATLG-TKPTLLVWGMKDVAFRPKTILPRLRATFPDHVLVELPNAKHFIQEDA-PDRIAAAIIERF 285 (286)
T ss_pred -HHHhhhhhhhhcC-CCCeEEEecCCCcccCcHHHHHHHHHhcCCCeEEEcCCCcccccccC-HHHHHHHHHHhc
Confidence 001111111 13 499999999999988655 5788999999999999999999999997 999999999997
|
|
| >PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-34 Score=236.41 Aligned_cols=289 Identities=18% Similarity=0.195 Sum_probs=168.2
Q ss_pred CccceeEeCCCceEEEEeCCCCC---CCcEEEeccCCCCCCCCC-c-ccccC---CCCcEEEEecCCCCCCCCCCCCCCc
Q 020064 22 YSTGILKVSDIHTIYWEQSGNPT---GHPVVFLHGGPGGGTTPS-N-RRFFD---PDFYRIILFDQRGAGKSTPHACLDQ 93 (331)
Q Consensus 22 ~~~~~~~~~~g~~l~~~~~g~~~---~~~vl~~HG~~~~~~~~~-~-~~~~~---~~g~~vi~~D~~G~G~s~~~~~~~~ 93 (331)
....++.+++ .+++|...|+++ +++|||+||++++...|. . ...+. +++|+|+++|+||||.|+.+.. ..
T Consensus 176 ~~~~~~~~~~-~~l~~~~~gp~~~~~k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~-~~ 253 (481)
T PLN03087 176 FCTSWLSSSN-ESLFVHVQQPKDNKAKEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPAD-SL 253 (481)
T ss_pred eeeeeEeeCC-eEEEEEEecCCCCCCCCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCC-Cc
Confidence 3345566666 599999988754 478999999887755543 2 23332 4799999999999999986542 45
Q ss_pred cchHHHHHHHH-HHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHh
Q 020064 94 NTTWDLIDDIE-KLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWES 172 (331)
Q Consensus 94 ~~~~~~~~~~~-~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (331)
++++++++++. .+++.++.++++++||||||.+++.+|.++|++|+++|+++++............ .....
T Consensus 254 ytl~~~a~~l~~~ll~~lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~~~~~~~~--------~~~~~ 325 (481)
T PLN03087 254 YTLREHLEMIERSVLERYKVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYPVPKGVQATQ--------YVMRK 325 (481)
T ss_pred CCHHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccccccchhHHH--------HHHHH
Confidence 88999999994 8999999999999999999999999999999999999999975432111000000 00000
Q ss_pred h--hccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhh---cCCccHHHHHHhhhhhhhhhc
Q 020064 173 F--RDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIK---RGEDDIFSLAFARIENHYFLN 247 (331)
Q Consensus 173 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 247 (331)
. ...............+..................|.................. ..........+... ...
T Consensus 326 ~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~----i~~ 401 (481)
T PLN03087 326 VAPRRVWPPIAFGASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNI----ICG 401 (481)
T ss_pred hcccccCCccccchhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHHHH----Hhc
Confidence 0 00000000000000000000000000000000000000000000000000000 00000000000000 000
Q ss_pred cCCCCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCc-CCchhHHHHHHHHHHHh
Q 020064 248 KGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANE-PGIAAELVATNEKLKNL 326 (331)
Q Consensus 248 ~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~~i~~fl~~ 326 (331)
.. ......+...+.++ ++|+|+|+|++|.++|++.++.+++.+|++++++++++||+++. ++ |+++++.|.+|+++
T Consensus 402 ~~-~~l~~~l~~l~~~I-~vPtLII~Ge~D~ivP~~~~~~la~~iP~a~l~vI~~aGH~~~v~e~-p~~fa~~L~~F~~~ 478 (481)
T PLN03087 402 SG-SKLDGYLDHVRDQL-KCDVAIFHGGDDELIPVECSYAVKAKVPRARVKVIDDKDHITIVVGR-QKEFARELEEIWRR 478 (481)
T ss_pred hh-hhhhhHHHHHHHhC-CCCEEEEEECCCCCCCHHHHHHHHHhCCCCEEEEeCCCCCcchhhcC-HHHHHHHHHHHhhc
Confidence 00 00011122334468 59999999999999999999999999999999999999999885 76 99999999999975
Q ss_pred h
Q 020064 327 I 327 (331)
Q Consensus 327 ~ 327 (331)
-
T Consensus 479 ~ 479 (481)
T PLN03087 479 S 479 (481)
T ss_pred c
Confidence 3
|
|
| >PLN02385 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-34 Score=233.35 Aligned_cols=271 Identities=17% Similarity=0.098 Sum_probs=168.3
Q ss_pred CCCccceeEeCCCceEEEEeCCCC---CCCcEEEeccCCCCCC-CC-CcccccCCCCcEEEEecCCCCCCCCCCCCCCcc
Q 020064 20 EPYSTGILKVSDIHTIYWEQSGNP---TGHPVVFLHGGPGGGT-TP-SNRRFFDPDFYRIILFDQRGAGKSTPHACLDQN 94 (331)
Q Consensus 20 ~~~~~~~~~~~~g~~l~~~~~g~~---~~~~vl~~HG~~~~~~-~~-~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~ 94 (331)
...++.++...+|.+++|..++++ .+++|||+||++++.. ++ ..+..+.+.||+|+++|+||||.|+.... ...
T Consensus 59 ~~~~~~~~~~~~g~~l~~~~~~p~~~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~-~~~ 137 (349)
T PLN02385 59 IKTEESYEVNSRGVEIFSKSWLPENSRPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLHG-YIP 137 (349)
T ss_pred cceeeeeEEcCCCCEEEEEEEecCCCCCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCC-CcC
Confidence 345556677788989999888753 3467999999876643 33 45566767899999999999999986542 235
Q ss_pred chHHHHHHHHHHHHHhCCC------cEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChh
Q 020064 95 TTWDLIDDIEKLRQHLEIP------EWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPD 168 (331)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~------~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (331)
+++++++|+.++++.+..+ +++|+||||||.+++.++.++|++++++|+++|......... .......
T Consensus 138 ~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~------~~~~~~~ 211 (349)
T PLN02385 138 SFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVV------PPPLVLQ 211 (349)
T ss_pred CHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEeccccccccccc------CchHHHH
Confidence 7899999999998887542 799999999999999999999999999999998653211000 0000000
Q ss_pred hHHhhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhcc
Q 020064 169 AWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNK 248 (331)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (331)
.........+...... ...+....... .. .. . .... ....... ...+......+
T Consensus 212 ~~~~~~~~~p~~~~~~-~~~~~~~~~~~-~~--~~---~------~~~~---~~~~~~~--~~~~~~~~~~l-------- 265 (349)
T PLN02385 212 ILILLANLLPKAKLVP-QKDLAELAFRD-LK--KR---K------MAEY---NVIAYKD--KPRLRTAVELL-------- 265 (349)
T ss_pred HHHHHHHHCCCceecC-CCccccccccC-HH--HH---H------Hhhc---CcceeCC--CcchHHHHHHH--------
Confidence 0000000000000000 00000000000 00 00 0 0000 0000000 00000000000
Q ss_pred CCCCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhC--CCCcEEEecCCCCCCCcCCchhH----HHHHHHH
Q 020064 249 GFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAW--PEADFKVVADAGHSANEPGIAAE----LVATNEK 322 (331)
Q Consensus 249 ~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~----~~~~i~~ 322 (331)
....+....+.++ ++|+|+|+|++|.++|++.++.+.+.+ +++++++++++||.++.++ |++ +++.|.+
T Consensus 266 ---~~~~~~~~~l~~i-~~P~Lii~G~~D~vv~~~~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~-p~~~~~~v~~~i~~ 340 (349)
T PLN02385 266 ---RTTQEIEMQLEEV-SLPLLILHGEADKVTDPSVSKFLYEKASSSDKKLKLYEDAYHSILEGE-PDEMIFQVLDDIIS 340 (349)
T ss_pred ---HHHHHHHHhcccC-CCCEEEEEeCCCCccChHHHHHHHHHcCCCCceEEEeCCCeeecccCC-ChhhHHHHHHHHHH
Confidence 0012344567788 599999999999999999999999887 5689999999999998876 665 8899999
Q ss_pred HHHhhh
Q 020064 323 LKNLIK 328 (331)
Q Consensus 323 fl~~~~ 328 (331)
||++..
T Consensus 341 wL~~~~ 346 (349)
T PLN02385 341 WLDSHS 346 (349)
T ss_pred HHHHhc
Confidence 998754
|
|
| >TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-34 Score=225.76 Aligned_cols=271 Identities=16% Similarity=0.106 Sum_probs=170.0
Q ss_pred CccceeEeCCCceEEEEeCCCCCCCcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHH
Q 020064 22 YSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLID 101 (331)
Q Consensus 22 ~~~~~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~ 101 (331)
...+++++ +|.+++|...|++++|+|||+||++++...|......++++|+|+++|+||||.|..+.. ..++++++++
T Consensus 6 ~~~~~~~~-~~~~~~~~~~g~~~~~~vv~~hG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~ 83 (278)
T TIGR03056 6 DCSRRVTV-GPFHWHVQDMGPTAGPLLLLLHGTGASTHSWRDLMPPLARSFRVVAPDLPGHGFTRAPFR-FRFTLPSMAE 83 (278)
T ss_pred CccceeeE-CCEEEEEEecCCCCCCeEEEEcCCCCCHHHHHHHHHHHhhCcEEEeecCCCCCCCCCccc-cCCCHHHHHH
Confidence 34566666 455999999987678999999998776554444444446789999999999999986552 3578999999
Q ss_pred HHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcch
Q 020064 102 DIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENE 181 (331)
Q Consensus 102 ~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (331)
|+.++++.++.++++++||||||.+++.+|.++|++++++|++++......... ....+. +........ .
T Consensus 84 ~l~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~-------~~~~~~-~~~~~~~~~--~ 153 (278)
T TIGR03056 84 DLSALCAAEGLSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMA-------GTLFPY-MARVLACNP--F 153 (278)
T ss_pred HHHHHHHHcCCCCceEEEECccHHHHHHHHHhCCcccceEEEEcCccccccccc-------ccccch-hhHhhhhcc--c
Confidence 999999999999999999999999999999999999999999987543211000 000000 000000000 0
Q ss_pred hhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCC-ChhhhhcC-CccHHHHHHhhhhhhhhhccCCCCCcchhhh
Q 020064 182 RSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLP-NEENIKRG-EDDIFSLAFARIENHYFLNKGFFPSDSFLLD 259 (331)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (331)
....... ........ ..+.. ........ ........ .......... ....... ......
T Consensus 154 ~~~~~~~----~~~~~~~~-----~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~----~~~~~~ 214 (278)
T TIGR03056 154 TPPMMSR----GAADQQRV-----ERLIR--DTGSLLDKAGMTYYGRLIRSPAHVDGAL----SMMAQWD----LAPLNR 214 (278)
T ss_pred chHHHHh----hcccCcch-----hHHhh--ccccccccchhhHHHHhhcCchhhhHHH----HHhhccc----ccchhh
Confidence 0000000 00000000 00000 00000000 00000000 0000000000 0000000 112334
Q ss_pred hccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHH
Q 020064 260 NIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKN 325 (331)
Q Consensus 260 ~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~ 325 (331)
.+.++ ++|+|+|+|++|.++|++..+.+.+.++++++++++++||+++.+. |+++++.|.+|++
T Consensus 215 ~~~~i-~~P~lii~g~~D~~vp~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~-p~~~~~~i~~f~~ 278 (278)
T TIGR03056 215 DLPRI-TIPLHLIAGEEDKAVPPDESKRAATRVPTATLHVVPGGGHLVHEEQ-ADGVVGLILQAAE 278 (278)
T ss_pred hcccC-CCCEEEEEeCCCcccCHHHHHHHHHhccCCeEEEECCCCCcccccC-HHHHHHHHHHHhC
Confidence 67788 5999999999999999999999999999999999999999999997 9999999999984
|
Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity. |
| >PLN02965 Probable pheophorbidase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-34 Score=225.35 Aligned_cols=245 Identities=15% Similarity=0.085 Sum_probs=153.4
Q ss_pred cEEEeccCCCCCCCC-CcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCC-CcEEEEEeChhH
Q 020064 47 PVVFLHGGPGGGTTP-SNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEI-PEWQVFGGSWGS 124 (331)
Q Consensus 47 ~vl~~HG~~~~~~~~-~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~lvG~S~Gg 124 (331)
+|||+||++.+...| ..+..+.+.+|+|+++|+||||.|+.... ..++++++++|+.++++.++. ++++++||||||
T Consensus 5 ~vvllHG~~~~~~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~-~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhSmGG 83 (255)
T PLN02965 5 HFVFVHGASHGAWCWYKLATLLDAAGFKSTCVDLTGAGISLTDSN-TVSSSDQYNRPLFALLSDLPPDHKVILVGHSIGG 83 (255)
T ss_pred EEEEECCCCCCcCcHHHHHHHHhhCCceEEEecCCcCCCCCCCcc-ccCCHHHHHHHHHHHHHhcCCCCCEEEEecCcch
Confidence 499999977665444 44555657899999999999999975542 357899999999999999987 499999999999
Q ss_pred HHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhh-ccccCCCch--HHH
Q 020064 125 TLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAY-SKRLNSDDK--ETQ 201 (331)
Q Consensus 125 ~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~ 201 (331)
.+++.++.++|++|+++|++++......... ...+........ ...... ......... ...
T Consensus 84 ~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~-----------~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 147 (255)
T PLN02965 84 GSVTEALCKFTDKISMAIYVAAAMVKPGSII-----------SPRLKNVMEGTE-----KIWDYTFGEGPDKPPTGIMMK 147 (255)
T ss_pred HHHHHHHHhCchheeEEEEEccccCCCCCCc-----------cHHHHhhhhccc-----cceeeeeccCCCCCcchhhcC
Confidence 9999999999999999999998642111000 000000000000 000000 000000000 000
Q ss_pred HHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCCCccC
Q 020064 202 YAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCP 281 (331)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~ 281 (331)
...... ..... ...+.. .............. ... ..+....+..+ ++|+++|+|++|.++|
T Consensus 148 ~~~~~~-----~~~~~--~~~~~~--------~~~~~~~~~~~~~~--~~~-~~~~~~~~~~i-~vP~lvi~g~~D~~~~ 208 (255)
T PLN02965 148 PEFVRH-----YYYNQ--SPLEDY--------TLSSKLLRPAPVRA--FQD-LDKLPPNPEAE-KVPRVYIKTAKDNLFD 208 (255)
T ss_pred HHHHHH-----HHhcC--CCHHHH--------HHHHHhcCCCCCcc--hhh-hhhccchhhcC-CCCEEEEEcCCCCCCC
Confidence 000000 00000 000000 00000000000000 000 11122245568 6999999999999999
Q ss_pred CcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhhh
Q 020064 282 MMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNLIK 328 (331)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~ 328 (331)
++.++.+.+.+|++++++++++||+++.|+ |+++++.|.+|++.+.
T Consensus 209 ~~~~~~~~~~~~~a~~~~i~~~GH~~~~e~-p~~v~~~l~~~~~~~~ 254 (255)
T PLN02965 209 PVRQDVMVENWPPAQTYVLEDSDHSAFFSV-PTTLFQYLLQAVSSLQ 254 (255)
T ss_pred HHHHHHHHHhCCcceEEEecCCCCchhhcC-HHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999997 9999999999998764
|
|
| >PRK10349 carboxylesterase BioH; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-34 Score=226.31 Aligned_cols=253 Identities=21% Similarity=0.267 Sum_probs=154.9
Q ss_pred eEEEEeCCCCCCC-cEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCC
Q 020064 34 TIYWEQSGNPTGH-PVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEI 112 (331)
Q Consensus 34 ~l~~~~~g~~~~~-~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (331)
.++|...| +++ +|||+||++++...|......+.++|+|+++|+||||.|.... .++.+++++++.+ +..
T Consensus 3 ~~~y~~~G--~g~~~ivllHG~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~---~~~~~~~~~~l~~----~~~ 73 (256)
T PRK10349 3 NIWWQTKG--QGNVHLVLLHGWGLNAEVWRCIDEELSSHFTLHLVDLPGFGRSRGFG---ALSLADMAEAVLQ----QAP 73 (256)
T ss_pred ccchhhcC--CCCCeEEEECCCCCChhHHHHHHHHHhcCCEEEEecCCCCCCCCCCC---CCCHHHHHHHHHh----cCC
Confidence 36788888 454 6999999877766555444444677999999999999998543 4677777776653 566
Q ss_pred CcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhccc
Q 020064 113 PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKR 192 (331)
Q Consensus 113 ~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (331)
++++++||||||.+++.+|.++|++++++|++++.+.......+ ..........+...+... .......+...
T Consensus 74 ~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 146 (256)
T PRK10349 74 DKAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEW------PGIKPDVLAGFQQQLSDD-FQRTVERFLAL 146 (256)
T ss_pred CCeEEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCCC------CcccHHHHHHHHHHHHhc-hHHHHHHHHHH
Confidence 89999999999999999999999999999999875432110000 000000000000000000 00001111000
Q ss_pred cCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEE
Q 020064 193 LNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIV 272 (331)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i 272 (331)
........ ......+.. .......... ......+.. + . ..+....+.++ ++|+|+|
T Consensus 147 ~~~~~~~~-~~~~~~~~~--~~~~~~~~~~--------~~~~~~~~~-----~------~-~~~~~~~l~~i-~~P~lii 202 (256)
T PRK10349 147 QTMGTETA-RQDARALKK--TVLALPMPEV--------DVLNGGLEI-----L------K-TVDLRQPLQNV-SMPFLRL 202 (256)
T ss_pred HHccCchH-HHHHHHHHH--HhhccCCCcH--------HHHHHHHHH-----H------H-hCccHHHHhhc-CCCeEEE
Confidence 00000000 000000000 0000000000 000000000 0 0 22455678889 6999999
Q ss_pred ecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhh
Q 020064 273 QGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNLI 327 (331)
Q Consensus 273 ~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 327 (331)
+|++|.++|.+.++.+.+.++++++++++++||+++.++ |+++.+.|.+|-+++
T Consensus 203 ~G~~D~~~~~~~~~~~~~~i~~~~~~~i~~~gH~~~~e~-p~~f~~~l~~~~~~~ 256 (256)
T PRK10349 203 YGYLDGLVPRKVVPMLDKLWPHSESYIFAKAAHAPFISH-PAEFCHLLVALKQRV 256 (256)
T ss_pred ecCCCccCCHHHHHHHHHhCCCCeEEEeCCCCCCccccC-HHHHHHHHHHHhccC
Confidence 999999999999999999999999999999999999997 999999999997653
|
|
| >PLN02578 hydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-33 Score=229.08 Aligned_cols=278 Identities=13% Similarity=0.115 Sum_probs=168.5
Q ss_pred ceeEeCCCceEEEEeCCCCCCCcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHH
Q 020064 25 GILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIE 104 (331)
Q Consensus 25 ~~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~ 104 (331)
.++... |.+++|...| ++++|||+||++++...|......+.++|+|+++|+||||.|+.+. ..++.+.+++++.
T Consensus 69 ~~~~~~-~~~i~Y~~~g--~g~~vvliHG~~~~~~~w~~~~~~l~~~~~v~~~D~~G~G~S~~~~--~~~~~~~~a~~l~ 143 (354)
T PLN02578 69 NFWTWR-GHKIHYVVQG--EGLPIVLIHGFGASAFHWRYNIPELAKKYKVYALDLLGFGWSDKAL--IEYDAMVWRDQVA 143 (354)
T ss_pred eEEEEC-CEEEEEEEcC--CCCeEEEECCCCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCCcc--cccCHHHHHHHHH
Confidence 344444 5589999988 5789999999877655444433444678999999999999998765 4688999999999
Q ss_pred HHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhh
Q 020064 105 KLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSC 184 (331)
Q Consensus 105 ~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (331)
++++.+..++++++|||+||.+++.+|.++|++++++|++++............. ... .....+... .... ...
T Consensus 144 ~~i~~~~~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~-~~~-~~~~~~~~~---~~~~-~~~ 217 (354)
T PLN02578 144 DFVKEVVKEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEE-AIV-VEETVLTRF---VVKP-LKE 217 (354)
T ss_pred HHHHHhccCCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCcccccccccccc-ccc-cccchhhHH---HhHH-HHH
Confidence 9999999899999999999999999999999999999999875432211000000 000 000000000 0000 000
Q ss_pred hHHhhccc---cCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhc----CCccHHHHHHhhhhhhhhhccCCCCCcchh
Q 020064 185 FVDAYSKR---LNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKR----GEDDIFSLAFARIENHYFLNKGFFPSDSFL 257 (331)
Q Consensus 185 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (331)
........ .............. ................ .........+......+.. .....+.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 288 (354)
T PLN02578 218 WFQRVVLGFLFWQAKQPSRIESVLK-----SVYKDKSNVDDYLVESITEPAADPNAGEVYYRLMSRFLF----NQSRYTL 288 (354)
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHH-----HhcCCcccCCHHHHHHHHhcccCCchHHHHHHHHHHHhc----CCCCCCH
Confidence 00000000 00000000000000 0000000000000000 0000000111111000000 0112334
Q ss_pred hhhccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHH
Q 020064 258 LDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKN 325 (331)
Q Consensus 258 ~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~ 325 (331)
.+.+.++ ++|+++|+|++|.++|.+.++.+.+.+|+++++++ ++||+++.++ |+++++.|.+|++
T Consensus 289 ~~~l~~i-~~PvLiI~G~~D~~v~~~~~~~l~~~~p~a~l~~i-~~GH~~~~e~-p~~~~~~I~~fl~ 353 (354)
T PLN02578 289 DSLLSKL-SCPLLLLWGDLDPWVGPAKAEKIKAFYPDTTLVNL-QAGHCPHDEV-PEQVNKALLEWLS 353 (354)
T ss_pred HHHhhcC-CCCEEEEEeCCCCCCCHHHHHHHHHhCCCCEEEEe-CCCCCccccC-HHHHHHHHHHHHh
Confidence 5678889 69999999999999999999999999999999999 5999999997 9999999999985
|
|
| >PLN03084 alpha/beta hydrolase fold protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-33 Score=224.44 Aligned_cols=269 Identities=17% Similarity=0.144 Sum_probs=166.9
Q ss_pred ceeEeCCCceEEEEeCCCCCCCcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCC--CccchHHHHHH
Q 020064 25 GILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACL--DQNTTWDLIDD 102 (331)
Q Consensus 25 ~~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~--~~~~~~~~~~~ 102 (331)
+.....+|.+++|...|+.++++|||+||++++...|..+...++++|+|+++|+||||.|+.+... ..+++++++++
T Consensus 107 ~~~~~~~~~~~~y~~~G~~~~~~ivllHG~~~~~~~w~~~~~~L~~~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~ 186 (383)
T PLN03084 107 QSQASSDLFRWFCVESGSNNNPPVLLIHGFPSQAYSYRKVLPVLSKNYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSS 186 (383)
T ss_pred eeEEcCCceEEEEEecCCCCCCeEEEECCCCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCCCcccccccCCHHHHHHH
Confidence 4444578889999999976789999999987765544433344467899999999999999876431 25799999999
Q ss_pred HHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCC----
Q 020064 103 IEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIP---- 178 (331)
Q Consensus 103 ~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 178 (331)
+..+++.++.++++|+|||+||.+++.+|.++|++|+++|+++++...... ..+..+..+...+.
T Consensus 187 l~~~i~~l~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~-----------~~p~~l~~~~~~l~~~~~ 255 (383)
T PLN03084 187 LESLIDELKSDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHA-----------KLPSTLSEFSNFLLGEIF 255 (383)
T ss_pred HHHHHHHhCCCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCccccc-----------cchHHHHHHHHHHhhhhh
Confidence 999999999999999999999999999999999999999999986432100 00000000000000
Q ss_pred cchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhh
Q 020064 179 ENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLL 258 (331)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (331)
................ .... .......+ .... ..+.. ....+......+.. . ......+..
T Consensus 256 ~~~~~~~~~~~~~~~~-~~~~-~~e~~~~~------~~~~-~~~~~----~~~~l~~~~r~~~~----~--l~~~~~~l~ 316 (383)
T PLN03084 256 SQDPLRASDKALTSCG-PYAM-KEDDAMVY------RRPY-LTSGS----SGFALNAISRSMKK----E--LKKYIEEMR 316 (383)
T ss_pred hcchHHHHhhhhcccC-ccCC-CHHHHHHH------hccc-cCCcc----hHHHHHHHHHHhhc----c--cchhhHHHH
Confidence 0000000000000000 0000 00000000 0000 00000 00000000000000 0 000001111
Q ss_pred hhc--cccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHh
Q 020064 259 DNI--DNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNL 326 (331)
Q Consensus 259 ~~l--~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 326 (331)
..+ .++ ++|+|+|+|++|.+++.+.++.+.+. +++++++++++||+++.|. |+++++.|.+|+++
T Consensus 317 ~~l~~~~i-~vPvLiI~G~~D~~v~~~~~~~~a~~-~~a~l~vIp~aGH~~~~E~-Pe~v~~~I~~Fl~~ 383 (383)
T PLN03084 317 SILTDKNW-KTPITVCWGLRDRWLNYDGVEDFCKS-SQHKLIELPMAGHHVQEDC-GEELGGIISGILSK 383 (383)
T ss_pred hhhccccC-CCCEEEEeeCCCCCcCHHHHHHHHHh-cCCeEEEECCCCCCcchhC-HHHHHHHHHHHhhC
Confidence 111 357 59999999999999999888888887 5899999999999999997 99999999999863
|
|
| >PRK07581 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=229.39 Aligned_cols=282 Identities=16% Similarity=0.130 Sum_probs=159.8
Q ss_pred CCceEEEEeCCCC--CC-CcEEEeccCCCCCCCCCcc----cccCCCCcEEEEecCCCCCCCCCCCCC-CccchH-----
Q 020064 31 DIHTIYWEQSGNP--TG-HPVVFLHGGPGGGTTPSNR----RFFDPDFYRIILFDQRGAGKSTPHACL-DQNTTW----- 97 (331)
Q Consensus 31 ~g~~l~~~~~g~~--~~-~~vl~~HG~~~~~~~~~~~----~~~~~~g~~vi~~D~~G~G~s~~~~~~-~~~~~~----- 97 (331)
+|.+++|...|+. .+ |+||++||++++..++... ..+..++|+||++|+||||.|..+... ..++++
T Consensus 24 ~~~~l~y~~~G~~~~~~~~~vll~~~~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~ 103 (339)
T PRK07581 24 PDARLAYKTYGTLNAAKDNAILYPTWYSGTHQDNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFPHV 103 (339)
T ss_pred CCceEEEEecCccCCCCCCEEEEeCCCCCCcccchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCCce
Confidence 4568999999852 23 4566666666554444322 355567999999999999999855421 123332
Q ss_pred HHHHHHHH----HHHHhCCCc-EEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccC-ChhhHH
Q 020064 98 DLIDDIEK----LRQHLEIPE-WQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAI-YPDAWE 171 (331)
Q Consensus 98 ~~~~~~~~----~~~~~~~~~-v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 171 (331)
.+++|+.. +++++++++ ++||||||||++++.+|.++|++|+++|++++..................+ ....|.
T Consensus 104 ~~~~~~~~~~~~l~~~lgi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 183 (339)
T PRK07581 104 TIYDNVRAQHRLLTEKFGIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAKTTPHNFVFLEGLKAALTADPAFN 183 (339)
T ss_pred eHHHHHHHHHHHHHHHhCCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCCCCHHHHHHHHHHHHHHHhCCCCC
Confidence 24555554 778899999 579999999999999999999999999999876542211100000000000 000000
Q ss_pred h-hhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCC-hhhhh--------cCCccHHHHHHhhhh
Q 020064 172 S-FRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPN-EENIK--------RGEDDIFSLAFARIE 241 (331)
Q Consensus 172 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--------~~~~~~~~~~~~~~~ 241 (331)
. .....+..........+.... ....+............. +.... ......+...+....
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 253 (339)
T PRK07581 184 GGWYAEPPERGLRAHARVYAGWG----------FSQAFYRQELWRAMGYASLEDFLVGFWEGNFLPRDPNNLLAMLWTWQ 253 (339)
T ss_pred CCCCCCcHHHHHHHHHHHHHHHH----------hHHHHHHhhhccccChhhHHHHHHHHHHHhhcccCcccHHHHHHHhh
Confidence 0 000000000000000000000 000000000000000000 00000 000001111110000
Q ss_pred hhhhhccCCCCC---cchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecC-CCCCCCcCCchhHHH
Q 020064 242 NHYFLNKGFFPS---DSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVAD-AGHSANEPGIAAELV 317 (331)
Q Consensus 242 ~~~~~~~~~~~~---~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~ 317 (331)
. ...... ..+..+.+.+| ++|+|+|+|++|..+|++.++.+.+.+|+++++++++ +||+.+.++ ++++.
T Consensus 254 ~-----~~~~~~~~~~~d~~~~L~~I-~~PtLvI~G~~D~~~p~~~~~~l~~~ip~a~l~~i~~~~GH~~~~~~-~~~~~ 326 (339)
T PRK07581 254 R-----GDISRNPAYGGDLAAALGSI-TAKTFVMPISTDLYFPPEDCEAEAALIPNAELRPIESIWGHLAGFGQ-NPADI 326 (339)
T ss_pred h-----cccccCcccCCCHHHHHhcC-CCCEEEEEeCCCCCCCHHHHHHHHHhCCCCeEEEeCCCCCccccccC-cHHHH
Confidence 0 000000 12456788899 5999999999999999999999999999999999998 999999997 99999
Q ss_pred HHHHHHHHhhhc
Q 020064 318 ATNEKLKNLIKN 329 (331)
Q Consensus 318 ~~i~~fl~~~~~ 329 (331)
+.|.+|++++.+
T Consensus 327 ~~~~~~~~~~~~ 338 (339)
T PRK07581 327 AFIDAALKELLA 338 (339)
T ss_pred HHHHHHHHHHHh
Confidence 999999998764
|
|
| >TIGR03611 RutD pyrimidine utilization protein D | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=221.77 Aligned_cols=254 Identities=17% Similarity=0.237 Sum_probs=162.5
Q ss_pred EEEEeCCC--CCCCcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCC
Q 020064 35 IYWEQSGN--PTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEI 112 (331)
Q Consensus 35 l~~~~~g~--~~~~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (331)
++|...|+ +++|+||++||++++..+|......+.++|+|+++|+||||.|..... ..++++++++++.++++.++.
T Consensus 1 ~~~~~~~~~~~~~~~iv~lhG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~~~~~i~~~~~ 79 (257)
T TIGR03611 1 MHYELHGPPDADAPVVVLSSGLGGSGSYWAPQLDVLTQRFHVVTYDHRGTGRSPGELP-PGYSIAHMADDVLQLLDALNI 79 (257)
T ss_pred CEEEEecCCCCCCCEEEEEcCCCcchhHHHHHHHHHHhccEEEEEcCCCCCCCCCCCc-ccCCHHHHHHHHHHHHHHhCC
Confidence 35666775 457889999998877666554444556789999999999999986432 457899999999999999999
Q ss_pred CcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhccc
Q 020064 113 PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKR 192 (331)
Q Consensus 113 ~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (331)
++++++||||||.+++.++.++|++++++|++++............. .. ......... ..+.......
T Consensus 80 ~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~~~~~--------~~-~~~~~~~~~---~~~~~~~~~~ 147 (257)
T TIGR03611 80 ERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPDPHTRRCFD--------VR-IALLQHAGP---EAYVHAQALF 147 (257)
T ss_pred CcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCCChhHHHHHH--------HH-HHHHhccCc---chhhhhhhhh
Confidence 99999999999999999999999999999999875432111000000 00 000000000 0000000000
Q ss_pred cCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcC-CccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEE
Q 020064 193 LNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRG-EDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATI 271 (331)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~ 271 (331)
.... .|.... ............... ....+...+.... ..+....+.++ ++|+++
T Consensus 148 ~~~~----------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~i-~~P~l~ 203 (257)
T TIGR03611 148 LYPA----------DWISEN-AARLAADEAHALAHFPGKANVLRRINALE------------AFDVSARLDRI-QHPVLL 203 (257)
T ss_pred hccc----------cHhhcc-chhhhhhhhhcccccCccHHHHHHHHHHH------------cCCcHHHhccc-CccEEE
Confidence 0000 000000 000000000000000 0000000000000 22344567888 599999
Q ss_pred EecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHh
Q 020064 272 VQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNL 326 (331)
Q Consensus 272 i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 326 (331)
++|++|.++|++.++.+.+.+++++++.++++||.++.++ ++++.+.|.+|+++
T Consensus 204 i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~-~~~~~~~i~~fl~~ 257 (257)
T TIGR03611 204 IANRDDMLVPYTQSLRLAAALPNAQLKLLPYGGHASNVTD-PETFNRALLDFLKT 257 (257)
T ss_pred EecCcCcccCHHHHHHHHHhcCCceEEEECCCCCCccccC-HHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999986 99999999999863
|
This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067. |
| >PRK10673 acyl-CoA esterase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-33 Score=219.13 Aligned_cols=240 Identities=17% Similarity=0.150 Sum_probs=154.0
Q ss_pred CCCCCcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCcEEEEEeC
Q 020064 42 NPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGS 121 (331)
Q Consensus 42 ~~~~~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG~S 121 (331)
+.++|+|||+||++++...|......+.++|+|+++|+||||.|.... .++++++++|+.++++.++.++++++|||
T Consensus 13 ~~~~~~iv~lhG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~s~~~~---~~~~~~~~~d~~~~l~~l~~~~~~lvGhS 89 (255)
T PRK10673 13 PHNNSPIVLVHGLFGSLDNLGVLARDLVNDHDIIQVDMRNHGLSPRDP---VMNYPAMAQDLLDTLDALQIEKATFIGHS 89 (255)
T ss_pred CCCCCCEEEECCCCCchhHHHHHHHHHhhCCeEEEECCCCCCCCCCCC---CCCHHHHHHHHHHHHHHcCCCceEEEEEC
Confidence 346789999999877755554444444678999999999999998654 57899999999999999999999999999
Q ss_pred hhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccC--CcchhhhhHHhhccccCCCchH
Q 020064 122 WGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLI--PENERSCFVDAYSKRLNSDDKE 199 (331)
Q Consensus 122 ~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 199 (331)
|||.+++.+|.++|++|+++|++++.+...... .....+....... ...........+...+. .. .
T Consensus 90 ~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~ 157 (255)
T PRK10673 90 MGGKAVMALTALAPDRIDKLVAIDIAPVDYHVR----------RHDEIFAAINAVSEAGATTRQQAAAIMRQHLN-EE-G 157 (255)
T ss_pred HHHHHHHHHHHhCHhhcceEEEEecCCCCccch----------hhHHHHHHHHHhhhcccccHHHHHHHHHHhcC-CH-H
Confidence 999999999999999999999998643211000 0000000000000 00000000000000000 00 0
Q ss_pred HHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCCCc
Q 020064 200 TQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVC 279 (331)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~ 279 (331)
... ......... .. ..........+. .....+.+.++ ++|+|+|+|++|..
T Consensus 158 -----~~~-----~~~~~~~~~-~~--~~~~~~~~~~~~---------------~~~~~~~~~~~-~~P~l~i~G~~D~~ 208 (255)
T PRK10673 158 -----VIQ-----FLLKSFVDG-EW--RFNVPVLWDQYP---------------HIVGWEKIPAW-PHPALFIRGGNSPY 208 (255)
T ss_pred -----HHH-----HHHhcCCcc-ee--EeeHHHHHHhHH---------------HHhCCcccCCC-CCCeEEEECCCCCC
Confidence 000 000000000 00 000000000000 00011345677 59999999999999
Q ss_pred cCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHh
Q 020064 280 CPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNL 326 (331)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 326 (331)
++.+..+.+.+.+|++++++++++||+++.++ |+++++.|.+|++.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~-p~~~~~~l~~fl~~ 254 (255)
T PRK10673 209 VTEAYRDDLLAQFPQARAHVIAGAGHWVHAEK-PDAVLRAIRRYLND 254 (255)
T ss_pred CCHHHHHHHHHhCCCcEEEEeCCCCCeeeccC-HHHHHHHHHHHHhc
Confidence 99999999999999999999999999999997 99999999999964
|
|
| >PLN02298 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-32 Score=220.54 Aligned_cols=266 Identities=14% Similarity=0.098 Sum_probs=167.1
Q ss_pred CCCCCccceeEeCCCceEEEEeCCCC----CCCcEEEeccCCCCCCC--CCcccccCCCCcEEEEecCCCCCCCCCCCCC
Q 020064 18 YVEPYSTGILKVSDIHTIYWEQSGNP----TGHPVVFLHGGPGGGTT--PSNRRFFDPDFYRIILFDQRGAGKSTPHACL 91 (331)
Q Consensus 18 ~~~~~~~~~~~~~~g~~l~~~~~g~~----~~~~vl~~HG~~~~~~~--~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~ 91 (331)
.....+..+++..||.+++|+.++++ .+++|||+||++.+..+ ......+.++||+|+++|+||||.|.....
T Consensus 28 ~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~~- 106 (330)
T PLN02298 28 KGIKGSKSFFTSPRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLRA- 106 (330)
T ss_pred cCCccccceEEcCCCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCccc-
Confidence 34556677889999999999877542 23469999998655333 223445667899999999999999975432
Q ss_pred CccchHHHHHHHHHHHHHhCC------CcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccC
Q 020064 92 DQNTTWDLIDDIEKLRQHLEI------PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAI 165 (331)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~------~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~ 165 (331)
...+++.+++|+.++++.+.. .+++|+||||||.+++.++.++|++|+++|++++......... ..
T Consensus 107 ~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~--------~~ 178 (330)
T PLN02298 107 YVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIR--------PP 178 (330)
T ss_pred cCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCCcccC--------Cc
Confidence 235788999999999998753 3799999999999999999999999999999998653211000 00
Q ss_pred ChhhHHhhhccCCcchhhhhHHhhccccCCCchH------HHHHHHHHhhhHHHhhhcCCCChhhhhcCCc-cHHHHHHh
Q 020064 166 YPDAWESFRDLIPENERSCFVDAYSKRLNSDDKE------TQYAAARAWTKWEMMTAHLLPNEENIKRGED-DIFSLAFA 238 (331)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 238 (331)
.+ .... ..+...+.......... ........... . ++........ ......+.
T Consensus 179 ~~--~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-----~~~~~~~~~~~~~~~~~~~ 238 (330)
T PLN02298 179 WP--IPQI---------LTFVARFLPTLAIVPTADLLEKSVKVPAKKIIAK----R-----NPMRYNGKPRLGTVVELLR 238 (330)
T ss_pred hH--HHHH---------HHHHHHHCCCCccccCCCcccccccCHHHHHHHH----h-----CccccCCCccHHHHHHHHH
Confidence 00 0000 00000111100000000 00000000000 0 0000000000 00000000
Q ss_pred hhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhC--CCCcEEEecCCCCCCCcCCch---
Q 020064 239 RIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAW--PEADFKVVADAGHSANEPGIA--- 313 (331)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~--- 313 (331)
. .....+.+.++ ++|+|+|+|++|.++|++.++.+.+.+ +++++++++++||.++.++ |
T Consensus 239 ~--------------~~~~~~~l~~i-~~PvLii~G~~D~ivp~~~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~-pd~~ 302 (330)
T PLN02298 239 V--------------TDYLGKKLKDV-SIPFIVLHGSADVVTDPDVSRALYEEAKSEDKTIKIYDGMMHSLLFGE-PDEN 302 (330)
T ss_pred H--------------HHHHHHhhhhc-CCCEEEEecCCCCCCCHHHHHHHHHHhccCCceEEEcCCcEeeeecCC-CHHH
Confidence 0 11234567788 699999999999999999999998887 4789999999999998764 4
Q ss_pred -hHHHHHHHHHHHhhh
Q 020064 314 -AELVATNEKLKNLIK 328 (331)
Q Consensus 314 -~~~~~~i~~fl~~~~ 328 (331)
+.+.+.|.+|+++..
T Consensus 303 ~~~~~~~i~~fl~~~~ 318 (330)
T PLN02298 303 IEIVRRDILSWLNERC 318 (330)
T ss_pred HHHHHHHHHHHHHHhc
Confidence 568888999998754
|
|
| >TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-33 Score=217.96 Aligned_cols=249 Identities=18% Similarity=0.199 Sum_probs=161.3
Q ss_pred eEEEEeCCCC-CCCcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCC
Q 020064 34 TIYWEQSGNP-TGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEI 112 (331)
Q Consensus 34 ~l~~~~~g~~-~~~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (331)
+++|...|++ ++|+||++||++.+...|......+..+|+|+++|+||||.|.... ..++++++++++.++++.++.
T Consensus 1 ~~~~~~~g~~~~~~~li~~hg~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~--~~~~~~~~~~~~~~~i~~~~~ 78 (251)
T TIGR02427 1 RLHYRLDGAADGAPVLVFINSLGTDLRMWDPVLPALTPDFRVLRYDKRGHGLSDAPE--GPYSIEDLADDVLALLDHLGI 78 (251)
T ss_pred CceEEeecCCCCCCeEEEEcCcccchhhHHHHHHHhhcccEEEEecCCCCCCCCCCC--CCCCHHHHHHHHHHHHHHhCC
Confidence 3677777865 5678999999776655544333444679999999999999997654 457899999999999999999
Q ss_pred CcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhcc-
Q 020064 113 PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSK- 191 (331)
Q Consensus 113 ~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 191 (331)
++++++|||+||.+++.+|.++|++++++|+++++........+... ...................+..
T Consensus 79 ~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~ 148 (251)
T TIGR02427 79 ERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPESWNAR----------IAAVRAEGLAALADAVLERWFTP 148 (251)
T ss_pred CceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCchhhHHHH----------HhhhhhccHHHHHHHHHHHHccc
Confidence 99999999999999999999999999999999875432111000000 0000000000000000000000
Q ss_pred ccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEE
Q 020064 192 RLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATI 271 (331)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~ 271 (331)
.+...... .. ..+... ........+...... .. ..+....+.++ ++|+++
T Consensus 149 ~~~~~~~~-~~---~~~~~~-------------~~~~~~~~~~~~~~~-----------~~-~~~~~~~~~~~-~~Pvli 198 (251)
T TIGR02427 149 GFREAHPA-RL---DLYRNM-------------LVRQPPDGYAGCCAA-----------IR-DADFRDRLGAI-AVPTLC 198 (251)
T ss_pred ccccCChH-HH---HHHHHH-------------HHhcCHHHHHHHHHH-----------Hh-cccHHHHhhhc-CCCeEE
Confidence 00000000 00 000000 000000000000000 00 22344567788 599999
Q ss_pred EecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHH
Q 020064 272 VQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKN 325 (331)
Q Consensus 272 i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~ 325 (331)
++|++|.++|.+..+.+.+.+++.++++++++||+++.+. ++++.+.|.+|++
T Consensus 199 i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~-p~~~~~~i~~fl~ 251 (251)
T TIGR02427 199 IAGDQDGSTPPELVREIADLVPGARFAEIRGAGHIPCVEQ-PEAFNAALRDFLR 251 (251)
T ss_pred EEeccCCcCChHHHHHHHHhCCCceEEEECCCCCcccccC-hHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999987 9999999999974
|
Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate. |
| >PRK08775 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-32 Score=222.23 Aligned_cols=276 Identities=20% Similarity=0.205 Sum_probs=160.8
Q ss_pred CccceeEeCCCceEEEEeCCCCCCCcEEEeccCCCCCC------------CCC-ccc---ccCCCCcEEEEecCCCCCCC
Q 020064 22 YSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGT------------TPS-NRR---FFDPDFYRIILFDQRGAGKS 85 (331)
Q Consensus 22 ~~~~~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~------------~~~-~~~---~~~~~g~~vi~~D~~G~G~s 85 (331)
+...+..+ +|.+++|...|+ .++++||+||+.++.. ||. .+. .+..++|+||++|+||||.|
T Consensus 36 ~~~~~~~~-~~~~l~y~~~G~-~~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s 113 (343)
T PRK08775 36 LSMRHAGL-EDLRLRYELIGP-AGAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGS 113 (343)
T ss_pred eeecCCCC-CCceEEEEEecc-CCCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCC
Confidence 33344445 566999999985 2556777777554433 454 333 34457899999999999988
Q ss_pred CCCCCCCccchHHHHHHHHHHHHHhCCCcE-EEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhh-c-cc
Q 020064 86 TPHACLDQNTTWDLIDDIEKLRQHLEIPEW-QVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYE-G-GA 162 (331)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~-~-~~ 162 (331)
.. ..++.+++++|+.++++.++++++ +++||||||++++.+|.++|++|+++|++++............. . ..
T Consensus 114 ~~----~~~~~~~~a~dl~~ll~~l~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~~~~~~~~~~~~~~~ 189 (343)
T PRK08775 114 LD----VPIDTADQADAIALLLDALGIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHRAHPYAAAWRALQRRA 189 (343)
T ss_pred CC----CCCCHHHHHHHHHHHHHHcCCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECccccCCHHHHHHHHHHHHH
Confidence 53 246788999999999999999775 79999999999999999999999999999986532111000000 0 00
Q ss_pred ccCC-----h-hhHHhhh--ccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHH
Q 020064 163 AAIY-----P-DAWESFR--DLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFS 234 (331)
Q Consensus 163 ~~~~-----~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (331)
.... . ....... ..........+...+............ .....+..... ...........+.
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~--------~~~~~~~~~~~~~ 260 (343)
T PRK08775 190 VALGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVR-VAAEDYLDAAG--------AQYVARTPVNAYL 260 (343)
T ss_pred HHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCcc-chHHHHHHHHH--------HHHHHhcChhHHH
Confidence 0000 0 0000000 000000000000000000000000000 00000000000 0000000000000
Q ss_pred HHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhC-CCCcEEEecC-CCCCCCcCCc
Q 020064 235 LAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAW-PEADFKVVAD-AGHSANEPGI 312 (331)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~-~~~~~~~~~~-~gH~~~~~~~ 312 (331)
...... . .....+.+| ++|+|+|+|++|.++|++.++.+.+.+ |+++++++++ +||.++.|+
T Consensus 261 ~~~~~~-------------~-~~~~~l~~I-~~PtLvi~G~~D~~~p~~~~~~~~~~i~p~a~l~~i~~~aGH~~~lE~- 324 (343)
T PRK08775 261 RLSESI-------------D-LHRVDPEAI-RVPTVVVAVEGDRLVPLADLVELAEGLGPRGSLRVLRSPYGHDAFLKE- 324 (343)
T ss_pred HHHHHH-------------h-hcCCChhcC-CCCeEEEEeCCCEeeCHHHHHHHHHHcCCCCeEEEEeCCccHHHHhcC-
Confidence 000000 0 001236788 599999999999999998889999888 7999999985 999999997
Q ss_pred hhHHHHHHHHHHHhhh
Q 020064 313 AAELVATNEKLKNLIK 328 (331)
Q Consensus 313 ~~~~~~~i~~fl~~~~ 328 (331)
|+++.+.|.+||++..
T Consensus 325 Pe~~~~~l~~FL~~~~ 340 (343)
T PRK08775 325 TDRIDAILTTALRSTG 340 (343)
T ss_pred HHHHHHHHHHHHHhcc
Confidence 9999999999998764
|
|
| >PRK10749 lysophospholipase L2; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-32 Score=220.87 Aligned_cols=276 Identities=12% Similarity=0.056 Sum_probs=168.5
Q ss_pred CCccceeEeCCCceEEEEeCCC-CCCCcEEEeccCCCCC-CCCCcccccCCCCcEEEEecCCCCCCCCCCCCC----Ccc
Q 020064 21 PYSTGILKVSDIHTIYWEQSGN-PTGHPVVFLHGGPGGG-TTPSNRRFFDPDFYRIILFDQRGAGKSTPHACL----DQN 94 (331)
Q Consensus 21 ~~~~~~~~~~~g~~l~~~~~g~-~~~~~vl~~HG~~~~~-~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~----~~~ 94 (331)
..++.++...+|.+++|..+++ ..+++||++||++++. .|..++..+++.||+|+++|+||||.|+..... ...
T Consensus 29 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~vll~HG~~~~~~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~ 108 (330)
T PRK10749 29 QREEAEFTGVDDIPIRFVRFRAPHHDRVVVICPGRIESYVKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHVE 108 (330)
T ss_pred hccceEEEcCCCCEEEEEEccCCCCCcEEEEECCccchHHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCccc
Confidence 3455666777888999999875 3457899999987664 456667677789999999999999999754211 125
Q ss_pred chHHHHHHHHHHHHHh----CCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhh-hHhhcccccCChhh
Q 020064 95 TTWDLIDDIEKLRQHL----EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEID-WFYEGGAAAIYPDA 169 (331)
Q Consensus 95 ~~~~~~~~~~~~~~~~----~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 169 (331)
+++++++|+..+++.+ +..+++++||||||.+++.++.++|++++++|+++|......... ..... .. .
T Consensus 109 ~~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~-----~~-~ 182 (330)
T PRK10749 109 RFNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPLPSWMARR-----IL-N 182 (330)
T ss_pred cHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCCCcHHHHH-----HH-H
Confidence 7899999999999886 567999999999999999999999999999999988643211000 00000 00 0
Q ss_pred HHhhhccCCcc---hhhhhHH-hhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhh-cCCccHHHHHHhhhhhhh
Q 020064 170 WESFRDLIPEN---ERSCFVD-AYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIK-RGEDDIFSLAFARIENHY 244 (331)
Q Consensus 170 ~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 244 (331)
+.......... ....... .+................+.+. . ++.... .............
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~------~----~~~~~~~~~~~~~~~~~~~~----- 247 (330)
T PRK10749 183 WAEGHPRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYA------D----DPELRVGGPTYHWVRESILA----- 247 (330)
T ss_pred HHHHhcCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHH------h----CCCcccCCCcHHHHHHHHHH-----
Confidence 00000000000 0000000 0000000000000000000000 0 000000 0000000000000
Q ss_pred hhccCCCCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhC-------CCCcEEEecCCCCCCCcCCc--hhH
Q 020064 245 FLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAW-------PEADFKVVADAGHSANEPGI--AAE 315 (331)
Q Consensus 245 ~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~-------~~~~~~~~~~~gH~~~~~~~--~~~ 315 (331)
.......+.++ ++|+|+|+|++|.+++++.++.+.+.+ +++++++++|+||.++.|.. .+.
T Consensus 248 ---------~~~~~~~~~~i-~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~ 317 (330)
T PRK10749 248 ---------GEQVLAGAGDI-TTPLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSV 317 (330)
T ss_pred ---------HHHHHhhccCC-CCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHH
Confidence 11233456788 599999999999999999888888866 35689999999999988763 577
Q ss_pred HHHHHHHHHHhh
Q 020064 316 LVATNEKLKNLI 327 (331)
Q Consensus 316 ~~~~i~~fl~~~ 327 (331)
+.+.|.+|+++.
T Consensus 318 v~~~i~~fl~~~ 329 (330)
T PRK10749 318 ALNAIVDFFNRH 329 (330)
T ss_pred HHHHHHHHHhhc
Confidence 999999999764
|
|
| >KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-32 Score=214.54 Aligned_cols=285 Identities=19% Similarity=0.140 Sum_probs=166.8
Q ss_pred CccceeEeCCCc-eEEEEeCCCC---------CCCcEEEeccCCCCCCCCC-cccccCCC-CcEEEEecCCCCCCCCCCC
Q 020064 22 YSTGILKVSDIH-TIYWEQSGNP---------TGHPVVFLHGGPGGGTTPS-NRRFFDPD-FYRIILFDQRGAGKSTPHA 89 (331)
Q Consensus 22 ~~~~~~~~~~g~-~l~~~~~g~~---------~~~~vl~~HG~~~~~~~~~-~~~~~~~~-g~~vi~~D~~G~G~s~~~~ 89 (331)
.....++...|. ++.....|.. ++++||++|||+++...|. .+..+... |++|+++|++|+|.+...+
T Consensus 25 ~~~~~i~~~~g~~~~~~~w~~~~~~~~~~~~~~~~pvlllHGF~~~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~ 104 (326)
T KOG1454|consen 25 LRSTSIEIPWGPLTIRSKWIPNLDKYGSPGDKDKPPVLLLHGFGASSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLP 104 (326)
T ss_pred ccceEEEcccCCceeEEEEeccceeccCCCCCCCCcEEEeccccCCcccHhhhccccccccceEEEEEecCCCCcCCCCC
Confidence 344555666663 4444444433 6889999999877655444 44444332 4999999999999655444
Q ss_pred CCCccchHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEE---EeccccchhhhhhhHhhcccccCC
Q 020064 90 CLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLV---LRGIFLLRKKEIDWFYEGGAAAIY 166 (331)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li---~~~~~~~~~~~~~~~~~~~~~~~~ 166 (331)
....|+..++++.+..++.....++++++|||+||.+|+.+|+.+|+.|+++| +++++................
T Consensus 105 ~~~~y~~~~~v~~i~~~~~~~~~~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~--- 181 (326)
T KOG1454|consen 105 RGPLYTLRELVELIRRFVKEVFVEPVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRRLLD--- 181 (326)
T ss_pred CCCceehhHHHHHHHHHHHhhcCcceEEEEeCcHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHHhhh---
Confidence 44569999999999999999998999999999999999999999999999999 555544322111000000000
Q ss_pred hhhHHhhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhh-hhcCCccHHHHHHhhhhhhhh
Q 020064 167 PDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEEN-IKRGEDDIFSLAFARIENHYF 245 (331)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 245 (331)
....................+...+.... ...........+. ........ ...+.+....-+
T Consensus 182 --~~~~~~~~~~p~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 244 (326)
T KOG1454|consen 182 --KFLSALELLIPLSLTEPVRLVSEGLLRCL--------------KVVYTDPSRLLEKLLHLLSRPV-KEHFHRDARLSL 244 (326)
T ss_pred --hhccHhhhcCccccccchhheeHhhhcce--------------eeeccccccchhhhhhheeccc-ccchhhhheeeE
Confidence 00000000000000000000000000000 0000000000000 00000000 000000000000
Q ss_pred hccCCCCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHH
Q 020064 246 LNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKN 325 (331)
Q Consensus 246 ~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~ 325 (331)
... ...........+.++.+||+|+++|++|+++|.+.+..+.+.+|++++++++++||.++++. |+++++.|..|+.
T Consensus 245 ~~~-~~~~~~~~~~~~~~i~~~pvlii~G~~D~~~p~~~~~~~~~~~pn~~~~~I~~~gH~~h~e~-Pe~~~~~i~~Fi~ 322 (326)
T KOG1454|consen 245 FLE-LLGFDENLLSLIKKIWKCPVLIIWGDKDQIVPLELAEELKKKLPNAELVEIPGAGHLPHLER-PEEVAALLRSFIA 322 (326)
T ss_pred EEe-ccCccchHHHhhccccCCceEEEEcCcCCccCHHHHHHHHhhCCCceEEEeCCCCcccccCC-HHHHHHHHHHHHH
Confidence 000 00002334446677735999999999999999999999999999999999999999999986 9999999999998
Q ss_pred hhh
Q 020064 326 LIK 328 (331)
Q Consensus 326 ~~~ 328 (331)
+..
T Consensus 323 ~~~ 325 (326)
T KOG1454|consen 323 RLR 325 (326)
T ss_pred Hhc
Confidence 754
|
|
| >TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-32 Score=215.99 Aligned_cols=279 Identities=19% Similarity=0.288 Sum_probs=165.9
Q ss_pred ceeEeCCCceEEEEeCCCCC-CCcEEEeccCCCC-CCCCCcccccCCC-CcEEEEecCCCCCCCCCCCCCC-ccchHHHH
Q 020064 25 GILKVSDIHTIYWEQSGNPT-GHPVVFLHGGPGG-GTTPSNRRFFDPD-FYRIILFDQRGAGKSTPHACLD-QNTTWDLI 100 (331)
Q Consensus 25 ~~~~~~~g~~l~~~~~g~~~-~~~vl~~HG~~~~-~~~~~~~~~~~~~-g~~vi~~D~~G~G~s~~~~~~~-~~~~~~~~ 100 (331)
.+++.+++ ++.|...+.++ +++|||+||++++ ..++.....++.+ ||+|+++|+||||.|..+.... .+++++++
T Consensus 5 ~~~~~~~~-~~~~~~~~~~~~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~ 83 (288)
T TIGR01250 5 GIITVDGG-YHLFTKTGGEGEKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFV 83 (288)
T ss_pred ceecCCCC-eEEEEeccCCCCCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHH
Confidence 35556555 77887776433 6789999997554 3445555555454 9999999999999998654222 37899999
Q ss_pred HHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcc
Q 020064 101 DDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPEN 180 (331)
Q Consensus 101 ~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (331)
+++.++++.++.++++++||||||.+++.+|..+|++++++|++++............ .....+...
T Consensus 84 ~~~~~~~~~~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~-------------~~~~~~~~~ 150 (288)
T TIGR01250 84 DELEEVREKLGLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDSAPEYVKELN-------------RLRKELPPE 150 (288)
T ss_pred HHHHHHHHHcCCCcEEEEEeehHHHHHHHHHHhCccccceeeEecccccchHHHHHHH-------------HHHhhcChh
Confidence 9999999999999999999999999999999999999999999987553321111000 000000000
Q ss_pred hhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhh-hhhhhccCCCCCcchhhh
Q 020064 181 ERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIE-NHYFLNKGFFPSDSFLLD 259 (331)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 259 (331)
....+ ............. .......+...... .....+..............+.... ...+...... ...+...
T Consensus 151 ~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 225 (288)
T TIGR01250 151 VRAAI-KRCEASGDYDNPE-YQEAVEVFYHHLLC--RTRKWPEALKHLKSGMNTNVYNIMQGPNEFTITGNL-KDWDITD 225 (288)
T ss_pred HHHHH-HHHHhccCcchHH-HHHHHHHHHHHhhc--ccccchHHHHHHhhccCHHHHhcccCCccccccccc-cccCHHH
Confidence 00000 0000000000000 00000000000000 0000000000000000000000000 0000000001 1234556
Q ss_pred hccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHH
Q 020064 260 NIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKN 325 (331)
Q Consensus 260 ~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~ 325 (331)
.+.++ ++|+++++|++|.+ +++..+.+.+.++++++++++++||+++.++ |+++.+.|.+|++
T Consensus 226 ~l~~i-~~P~lii~G~~D~~-~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~-p~~~~~~i~~fl~ 288 (288)
T TIGR01250 226 KLSEI-KVPTLLTVGEFDTM-TPEAAREMQELIAGSRLVVFPDGSHMTMIED-PEVYFKLLSDFIR 288 (288)
T ss_pred Hhhcc-CCCEEEEecCCCcc-CHHHHHHHHHhccCCeEEEeCCCCCCcccCC-HHHHHHHHHHHhC
Confidence 77889 59999999999985 5678888999899999999999999999997 9999999999984
|
This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase |
| >PRK00175 metX homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-32 Score=220.63 Aligned_cols=283 Identities=16% Similarity=0.157 Sum_probs=164.5
Q ss_pred CCceEEEEeCCCC---CCCcEEEeccCCCCCC-------------CCCcc----cccCCCCcEEEEecCCCC-CCCCCCC
Q 020064 31 DIHTIYWEQSGNP---TGHPVVFLHGGPGGGT-------------TPSNR----RFFDPDFYRIILFDQRGA-GKSTPHA 89 (331)
Q Consensus 31 ~g~~l~~~~~g~~---~~~~vl~~HG~~~~~~-------------~~~~~----~~~~~~g~~vi~~D~~G~-G~s~~~~ 89 (331)
+|.+++|...|.+ ++|+|||+||++++.. ||... ..++.++|+||++|++|+ |.|..+.
T Consensus 31 ~~~~~~y~~~G~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~ 110 (379)
T PRK00175 31 PPVELAYETYGTLNADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPS 110 (379)
T ss_pred CCceEEEEeccccCCCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCC
Confidence 3457899999853 2689999999887754 23333 245578999999999983 5443221
Q ss_pred ------------CCCccchHHHHHHHHHHHHHhCCCc-EEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhh
Q 020064 90 ------------CLDQNTTWDLIDDIEKLRQHLEIPE-WQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDW 156 (331)
Q Consensus 90 ------------~~~~~~~~~~~~~~~~~~~~~~~~~-v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~ 156 (331)
....++++++++++..++++++.++ ++++||||||.+++.+|.++|++|+++|++++..........
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 190 (379)
T PRK00175 111 SINPDTGKPYGSDFPVITIRDWVRAQARLLDALGITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSARLSAQNIA 190 (379)
T ss_pred CCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCcccCHHHHH
Confidence 0125789999999999999999999 589999999999999999999999999999986643221000
Q ss_pred HhhcccccCC-hhhHHh--hhc-cCCcc-h--------------hhhhHHhhccccCCCch---HHHHHHHHHhhhHHHh
Q 020064 157 FYEGGAAAIY-PDAWES--FRD-LIPEN-E--------------RSCFVDAYSKRLNSDDK---ETQYAAARAWTKWEMM 214 (331)
Q Consensus 157 ~~~~~~~~~~-~~~~~~--~~~-~~~~~-~--------------~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 214 (331)
+......... ...|.. +.. ..... . ...+...+......... .........+....
T Consensus 191 ~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~-- 268 (379)
T PRK00175 191 FNEVARQAILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPFGFDVEFQVESYLRYQ-- 268 (379)
T ss_pred HHHHHHHHHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccccCCCccchHHHHHHHH--
Confidence 0000000000 000000 000 00000 0 00000000000000000 00000000000000
Q ss_pred hhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCC-CcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCC
Q 020064 215 TAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFP-SDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWP 293 (331)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~ 293 (331)
............+......+. ...... ...++.+.+.+| ++|+|+|+|++|.++|++.++.+.+.++
T Consensus 269 ------~~~~~~~~d~~~~~~~~~~~~-----~~d~~~~~~~d~~~~l~~I-~~PtLvI~G~~D~~~p~~~~~~la~~i~ 336 (379)
T PRK00175 269 ------GDKFVERFDANSYLYLTRALD-----YFDPARGRGGDLAAALARI-KARFLVVSFTSDWLFPPARSREIVDALL 336 (379)
T ss_pred ------HHHHhhccCchHHHHHHHHHH-----hccccCCCCCCHHHHHhcC-CCCEEEEEECCccccCHHHHHHHHHHHH
Confidence 000000001111111000000 000000 013467789999 5999999999999999999999999998
Q ss_pred CC----cEEEec-CCCCCCCcCCchhHHHHHHHHHHHhhh
Q 020064 294 EA----DFKVVA-DAGHSANEPGIAAELVATNEKLKNLIK 328 (331)
Q Consensus 294 ~~----~~~~~~-~~gH~~~~~~~~~~~~~~i~~fl~~~~ 328 (331)
++ ++++++ ++||+++.++ |+++++.|.+||+++.
T Consensus 337 ~a~~~~~l~~i~~~~GH~~~le~-p~~~~~~L~~FL~~~~ 375 (379)
T PRK00175 337 AAGADVSYAEIDSPYGHDAFLLD-DPRYGRLVRAFLERAA 375 (379)
T ss_pred hcCCCeEEEEeCCCCCchhHhcC-HHHHHHHHHHHHHhhh
Confidence 87 777775 9999999997 9999999999998864
|
|
| >PHA02857 monoglyceride lipase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-32 Score=213.51 Aligned_cols=258 Identities=13% Similarity=0.066 Sum_probs=158.3
Q ss_pred eeEeCCCceEEEEeCCCC--CCCcEEEeccCCCCCC-CCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHH
Q 020064 26 ILKVSDIHTIYWEQSGNP--TGHPVVFLHGGPGGGT-TPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDD 102 (331)
Q Consensus 26 ~~~~~~g~~l~~~~~g~~--~~~~vl~~HG~~~~~~-~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~ 102 (331)
++...||.+++|..+-+. ..+.|+++||++++.. |...+..+.+.||+|+++|+||||.|+... ....++.++++|
T Consensus 4 ~~~~~~g~~l~~~~~~~~~~~~~~v~llHG~~~~~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~-~~~~~~~~~~~d 82 (276)
T PHA02857 4 CMFNLDNDYIYCKYWKPITYPKALVFISHGAGEHSGRYEELAENISSLGILVFSHDHIGHGRSNGEK-MMIDDFGVYVRD 82 (276)
T ss_pred eeecCCCCEEEEEeccCCCCCCEEEEEeCCCccccchHHHHHHHHHhCCCEEEEccCCCCCCCCCcc-CCcCCHHHHHHH
Confidence 455668889999776542 2345666799766544 455666676789999999999999997543 122455666777
Q ss_pred HHHHHHHh----CCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhh-hcc-
Q 020064 103 IEKLRQHL----EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESF-RDL- 176 (331)
Q Consensus 103 ~~~~~~~~----~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~- 176 (331)
+.+.++.+ ..++++++||||||.+++.+|.++|++++++|+++|....... . ........ ...
T Consensus 83 ~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~~-~----------~~~~~~~~~~~~~ 151 (276)
T PHA02857 83 VVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAEAV-P----------RLNLLAAKLMGIF 151 (276)
T ss_pred HHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccccccccc-c----------HHHHHHHHHHHHh
Confidence 77766554 3468999999999999999999999999999999985431100 0 00000000 000
Q ss_pred CCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcch
Q 020064 177 IPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSF 256 (331)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (331)
.+.. ....+........... .. .... ++..........+....... ..+
T Consensus 152 ~~~~----~~~~~~~~~~~~~~~~----~~-----~~~~-----~~~~~~~~~~~~~~~~~~~~-------------~~~ 200 (276)
T PHA02857 152 YPNK----IVGKLCPESVSRDMDE----VY-----KYQY-----DPLVNHEKIKAGFASQVLKA-------------TNK 200 (276)
T ss_pred CCCC----ccCCCCHhhccCCHHH----HH-----HHhc-----CCCccCCCccHHHHHHHHHH-------------HHH
Confidence 0000 0000000000000000 00 0000 00000000000000000000 123
Q ss_pred hhhhccccccccEEEEecCCCCccCCcchHHHHHhC-CCCcEEEecCCCCCCCcCCc--hhHHHHHHHHHHHhh
Q 020064 257 LLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAW-PEADFKVVADAGHSANEPGI--AAELVATNEKLKNLI 327 (331)
Q Consensus 257 ~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~--~~~~~~~i~~fl~~~ 327 (331)
..+.+.++ ++|+|+|+|++|.++|++.++++.+.+ +++++++++++||.++.|.. .+++.+.+.+||+..
T Consensus 201 ~~~~l~~i-~~Pvliv~G~~D~i~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 201 VRKIIPKI-KTPILILQGTNNEISDVSGAYYFMQHANCNREIKIYEGAKHHLHKETDEVKKSVMKEIETWIFNR 273 (276)
T ss_pred HHHhcccC-CCCEEEEecCCCCcCChHHHHHHHHHccCCceEEEeCCCcccccCCchhHHHHHHHHHHHHHHHh
Confidence 34567888 599999999999999999999999887 57899999999999998753 678999999999864
|
|
| >TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-32 Score=219.32 Aligned_cols=280 Identities=18% Similarity=0.230 Sum_probs=163.8
Q ss_pred CCceEEEEeCCC---CCCCcEEEeccCCCCC--C---------CCCcc----cccCCCCcEEEEecCCC--CCCCCCCC-
Q 020064 31 DIHTIYWEQSGN---PTGHPVVFLHGGPGGG--T---------TPSNR----RFFDPDFYRIILFDQRG--AGKSTPHA- 89 (331)
Q Consensus 31 ~g~~l~~~~~g~---~~~~~vl~~HG~~~~~--~---------~~~~~----~~~~~~g~~vi~~D~~G--~G~s~~~~- 89 (331)
+|.+++|..+|+ ..+++|||+||++++. . ||... ..+..++|+||++|+|| ||.|....
T Consensus 14 ~~~~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~~ 93 (351)
T TIGR01392 14 SDVRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSSI 93 (351)
T ss_pred CCceEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCCC
Confidence 566999999995 2357899999977654 2 34433 26667899999999999 56654311
Q ss_pred ---C------CCccchHHHHHHHHHHHHHhCCCc-EEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhh
Q 020064 90 ---C------LDQNTTWDLIDDIEKLRQHLEIPE-WQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYE 159 (331)
Q Consensus 90 ---~------~~~~~~~~~~~~~~~~~~~~~~~~-v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~ 159 (331)
. ...++++++++++..+++.++.++ ++++||||||.+++.+|.++|++++++|++++..........+..
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 173 (351)
T TIGR01392 94 NPGGRPYGSDFPLITIRDDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSARHSAWCIAFNE 173 (351)
T ss_pred CCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCcCCHHHHHHHH
Confidence 0 124789999999999999999999 999999999999999999999999999999987643221100000
Q ss_pred cccccCC-hhhHHh--hhcc-CCcchh--------------hhhHHhhccccCCC-chH---HHHHHHHHhhhHHHhhhc
Q 020064 160 GGAAAIY-PDAWES--FRDL-IPENER--------------SCFVDAYSKRLNSD-DKE---TQYAAARAWTKWEMMTAH 217 (331)
Q Consensus 160 ~~~~~~~-~~~~~~--~~~~-~~~~~~--------------~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~ 217 (331)
.....+. ...+.. +... .+.... ..+...+....... .+. ........+..+.
T Consensus 174 ~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 248 (351)
T TIGR01392 174 VQRQAILADPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAPQSGESPASGFDTRFQVESYLRYQ----- 248 (351)
T ss_pred HHHHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCcccccccccccCccchHHHHHHHH-----
Confidence 0000000 000000 0000 000000 00000000000000 000 0000000000000
Q ss_pred CCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCCCCcE
Q 020064 218 LLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADF 297 (331)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~ 297 (331)
............+......+ ..........+..+.+.+| ++|+|+|+|++|.++|++.++.+.+.+|++++
T Consensus 249 ---~~~~~~~~d~~~~~~~~~~l-----~~~d~~~~~~~~~~~l~~I-~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~~~~ 319 (351)
T TIGR01392 249 ---GDKFVDRFDANSYLYLTRAL-----DTHDLGRGRGSLTEALSRI-KAPFLVVSITSDWLFPPAESRELAKALPAAGL 319 (351)
T ss_pred ---HHHHHhhcCcchHHHHHHHH-----HhcCCcCCCCCHHHHHhhC-CCCEEEEEeCCccccCHHHHHHHHHHHhhcCC
Confidence 00000000000110000000 0000000013456789999 59999999999999999999999999998876
Q ss_pred E-----EecCCCCCCCcCCchhHHHHHHHHHHH
Q 020064 298 K-----VVADAGHSANEPGIAAELVATNEKLKN 325 (331)
Q Consensus 298 ~-----~~~~~gH~~~~~~~~~~~~~~i~~fl~ 325 (331)
+ +++++||.++.++ |+++.+.|.+||+
T Consensus 320 ~v~~~~i~~~~GH~~~le~-p~~~~~~l~~FL~ 351 (351)
T TIGR01392 320 RVTYVEIESPYGHDAFLVE-TDQVEELIRGFLR 351 (351)
T ss_pred ceEEEEeCCCCCcchhhcC-HHHHHHHHHHHhC
Confidence 6 5678999999997 9999999999984
|
This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes. |
| >PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.2e-31 Score=207.24 Aligned_cols=238 Identities=17% Similarity=0.173 Sum_probs=143.7
Q ss_pred CCcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCcEEEEEeChhH
Q 020064 45 GHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGS 124 (331)
Q Consensus 45 ~~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg 124 (331)
+|+|||+||++++...|......+ ++|+|+++|+||||.|..+. ..+++++++|+.++++.++.++++++||||||
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~~l-~~~~vi~~D~~G~G~S~~~~---~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg 77 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGEAL-PDYPRLYIDLPGHGGSAAIS---VDGFADVSRLLSQTLQSYNILPYWLVGYSLGG 77 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHHHc-CCCCEEEecCCCCCCCCCcc---ccCHHHHHHHHHHHHHHcCCCCeEEEEECHHH
Confidence 578999999877655444333344 47999999999999998654 34889999999999999999999999999999
Q ss_pred HHHHHHHHhCCCc-eeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhccccCCCchHHHHH
Q 020064 125 TLALAYSLAHPDK-VTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYA 203 (331)
Q Consensus 125 ~~a~~~a~~~p~~-v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (331)
.+++.+|.++|+. +++++++++.............. .....|.... .......+...
T Consensus 78 ~va~~~a~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~----~~~~~~~~~~---~~~~~~~~~~~--------------- 135 (242)
T PRK11126 78 RIAMYYACQGLAGGLCGLIVEGGNPGLQNAEERQARW----QNDRQWAQRF---RQEPLEQVLAD--------------- 135 (242)
T ss_pred HHHHHHHHhCCcccccEEEEeCCCCCCCCHHHHHHHH----hhhHHHHHHh---ccCcHHHHHHH---------------
Confidence 9999999999664 99999988654221110000000 0000111000 00000000000
Q ss_pred HHHHhhhHHHhhhcCCCC-h-hhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCCCccC
Q 020064 204 AARAWTKWEMMTAHLLPN-E-ENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCP 281 (331)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~ 281 (331)
|....... ..... . ......... ...... ..+....... ..+..+.+.++ ++|+++|+|++|..+.
T Consensus 136 ----~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~~-~~~~~~~l~~i-~~P~lii~G~~D~~~~ 203 (242)
T PRK11126 136 ----WYQQPVFA-SLNAEQRQQLVAKRSNN-NGAAVA----AMLEATSLAK-QPDLRPALQAL-TFPFYYLCGERDSKFQ 203 (242)
T ss_pred ----HHhcchhh-ccCccHHHHHHHhcccC-CHHHHH----HHHHhcCccc-CCcHHHHhhcc-CCCeEEEEeCCcchHH
Confidence 00000000 00000 0 000000000 000000 0000000111 23455678899 5999999999998652
Q ss_pred CcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhh
Q 020064 282 MMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNLI 327 (331)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 327 (331)
.+.+. .++++++++++||+++.+. |+++++.|.+|++.+
T Consensus 204 -----~~~~~-~~~~~~~i~~~gH~~~~e~-p~~~~~~i~~fl~~~ 242 (242)
T PRK11126 204 -----ALAQQ-LALPLHVIPNAGHNAHREN-PAAFAASLAQILRLI 242 (242)
T ss_pred -----HHHHH-hcCeEEEeCCCCCchhhhC-hHHHHHHHHHHHhhC
Confidence 23333 3899999999999999997 999999999999763
|
|
| >TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-31 Score=207.84 Aligned_cols=239 Identities=21% Similarity=0.218 Sum_probs=145.5
Q ss_pred CcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCcEEEEEeChhHH
Q 020064 46 HPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGST 125 (331)
Q Consensus 46 ~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~ 125 (331)
|+|||+||++++...|......+.++|+|+++|+||+|.|.... .++++++++++.+.+ .++++++||||||.
T Consensus 5 ~~iv~~HG~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~---~~~~~~~~~~~~~~~----~~~~~lvG~S~Gg~ 77 (245)
T TIGR01738 5 VHLVLIHGWGMNAEVFRCLDEELSAHFTLHLVDLPGHGRSRGFG---PLSLADAAEAIAAQA----PDPAIWLGWSLGGL 77 (245)
T ss_pred ceEEEEcCCCCchhhHHHHHHhhccCeEEEEecCCcCccCCCCC---CcCHHHHHHHHHHhC----CCCeEEEEEcHHHH
Confidence 78999999877766555444444678999999999999987543 467777777776543 26899999999999
Q ss_pred HHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhcc--ccCCCchHHHHH
Q 020064 126 LALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSK--RLNSDDKETQYA 203 (331)
Q Consensus 126 ~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 203 (331)
+++.+|.++|++++++|++++.+.......+. ....+.....+........ ......+.. .+........
T Consensus 78 ~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-- 149 (245)
T TIGR01738 78 VALHIAATHPDRVRALVTVASSPCFSAREDWP-----EGIKPDVLTGFQQQLSDDY-QRTIERFLALQTLGTPTARQD-- 149 (245)
T ss_pred HHHHHHHHCHHhhheeeEecCCcccccCCccc-----ccCCHHHHHHHHHHhhhhH-HHHHHHHHHHHHhcCCccchH--
Confidence 99999999999999999998765321110000 0000000100000000000 000000000 0000000000
Q ss_pred HHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCCCccCCc
Q 020064 204 AARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMM 283 (331)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~ 283 (331)
...+. .......... ...+...+.. .. ..+....+.++ ++|+++++|++|.++|++
T Consensus 150 -~~~~~--~~~~~~~~~~--------~~~~~~~~~~-----------~~-~~~~~~~l~~i-~~Pvlii~g~~D~~~~~~ 205 (245)
T TIGR01738 150 -ARALK--QTLLARPTPN--------VQVLQAGLEI-----------LA-TVDLRQPLQNI-SVPFLRLYGYLDGLVPAK 205 (245)
T ss_pred -HHHHH--HHhhccCCCC--------HHHHHHHHHH-----------hh-cccHHHHHhcC-CCCEEEEeecCCcccCHH
Confidence 00000 0000000000 0000000000 00 22345567889 599999999999999999
Q ss_pred chHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHH
Q 020064 284 SAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLK 324 (331)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl 324 (331)
..+.+.+.+|++++++++++||+++.++ |+++++.|.+|+
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~gH~~~~e~-p~~~~~~i~~fi 245 (245)
T TIGR01738 206 VVPYLDKLAPHSELYIFAKAAHAPFLSH-AEAFCALLVAFK 245 (245)
T ss_pred HHHHHHHhCCCCeEEEeCCCCCCccccC-HHHHHHHHHhhC
Confidence 9999999999999999999999999997 999999999985
|
This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria. |
| >PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-30 Score=214.37 Aligned_cols=258 Identities=19% Similarity=0.148 Sum_probs=162.2
Q ss_pred eeEeCCCceEEEEeCCCCCCCcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHH
Q 020064 26 ILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEK 105 (331)
Q Consensus 26 ~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~ 105 (331)
.+... +.+++|...|++++++|||+||++++...|......+..+|+|+++|+||||.|.... ...+++++++++..
T Consensus 113 ~~~~~-~~~i~~~~~g~~~~~~vl~~HG~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~--~~~~~~~~~~~~~~ 189 (371)
T PRK14875 113 KARIG-GRTVRYLRLGEGDGTPVVLIHGFGGDLNNWLFNHAALAAGRPVIALDLPGHGASSKAV--GAGSLDELAAAVLA 189 (371)
T ss_pred cceEc-CcEEEEecccCCCCCeEEEECCCCCccchHHHHHHHHhcCCEEEEEcCCCCCCCCCCC--CCCCHHHHHHHHHH
Confidence 34444 4488999888767899999999877655544333344567999999999999996544 35689999999999
Q ss_pred HHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhh
Q 020064 106 LRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCF 185 (331)
Q Consensus 106 ~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (331)
+++.++.++++++|||+||.+++.+|..+|+++.++|++++.......... .+..+............
T Consensus 190 ~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~ 257 (371)
T PRK14875 190 FLDALGIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPEINGD------------YIDGFVAAESRRELKPV 257 (371)
T ss_pred HHHhcCCccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCcccchh------------HHHHhhcccchhHHHHH
Confidence 999999999999999999999999999999999999999876432211000 00000000000000011
Q ss_pred HHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccc
Q 020064 186 VDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIR 265 (331)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 265 (331)
+..... ............... . .........+.......+.. .....+....+.++
T Consensus 258 ~~~~~~----~~~~~~~~~~~~~~~------~----------~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~i- 313 (371)
T PRK14875 258 LELLFA----DPALVTRQMVEDLLK------Y----------KRLDGVDDALRALADALFAG---GRQRVDLRDRLASL- 313 (371)
T ss_pred HHHHhc----ChhhCCHHHHHHHHH------H----------hccccHHHHHHHHHHHhccC---cccchhHHHHHhcC-
Confidence 111000 000000000000000 0 00000001111111111000 00123455577888
Q ss_pred cccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHh
Q 020064 266 HINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNL 326 (331)
Q Consensus 266 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 326 (331)
++|+|+++|++|.++|++.++.+ .++.++.+++++||+++.++ |+++.+.|.+|+++
T Consensus 314 ~~Pvlii~g~~D~~vp~~~~~~l---~~~~~~~~~~~~gH~~~~e~-p~~~~~~i~~fl~~ 370 (371)
T PRK14875 314 AIPVLVIWGEQDRIIPAAHAQGL---PDGVAVHVLPGAGHMPQMEA-AADVNRLLAEFLGK 370 (371)
T ss_pred CCCEEEEEECCCCccCHHHHhhc---cCCCeEEEeCCCCCChhhhC-HHHHHHHHHHHhcc
Confidence 59999999999999997665433 35689999999999999997 99999999999964
|
|
| >PLN02211 methyl indole-3-acetate methyltransferase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.9e-30 Score=202.53 Aligned_cols=264 Identities=14% Similarity=0.096 Sum_probs=157.4
Q ss_pred CCCceEEEEeCCCCCCCcEEEeccCCCCCC-CCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHH
Q 020064 30 SDIHTIYWEQSGNPTGHPVVFLHGGPGGGT-TPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQ 108 (331)
Q Consensus 30 ~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~-~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~ 108 (331)
.+|.+++|..- ..++|+|||+||++++.. |..+...+.++||+|+++|+||||.|..... ..++++++++++.++++
T Consensus 4 ~~~~~~~~~~~-~~~~p~vvliHG~~~~~~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~-~~~~~~~~~~~l~~~i~ 81 (273)
T PLN02211 4 ENGEEVTDMKP-NRQPPHFVLIHGISGGSWCWYKIRCLMENSGYKVTCIDLKSAGIDQSDAD-SVTTFDEYNKPLIDFLS 81 (273)
T ss_pred ccccccccccc-cCCCCeEEEECCCCCCcCcHHHHHHHHHhCCCEEEEecccCCCCCCCCcc-cCCCHHHHHHHHHHHHH
Confidence 35667888763 236789999999666544 4445555656799999999999998854331 23789999999999999
Q ss_pred HhC-CCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhh-HhhcccccCChhhHHhhhccCCcchhhhhH
Q 020064 109 HLE-IPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDW-FYEGGAAAIYPDAWESFRDLIPENERSCFV 186 (331)
Q Consensus 109 ~~~-~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (331)
.++ .++++|+||||||.++..++..+|++|+++|++++.......... ....+.... .......... .
T Consensus 82 ~l~~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~~~~~~----~- 151 (273)
T PLN02211 82 SLPENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATMLKLGFQTDEDMKDGVPDL-----SEFGDVYELG----F- 151 (273)
T ss_pred hcCCCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccccCCCCCCHHHHHhccccch-----hhhccceeee----e-
Confidence 985 579999999999999999999999999999999875432110000 000000000 0000000000 0
Q ss_pred HhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhcccccc
Q 020064 187 DAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRH 266 (331)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 266 (331)
....................+ +... ...+. ..+.....+... ...+. ..+..+...++.+
T Consensus 152 -~~~~~~~~~~~~~~~~~~~~~-----~~~~--~~~~~------~~~~~~~~~~~~-----~~~~~-~~~~~~~~~~~~~ 211 (273)
T PLN02211 152 -GLGPDQPPTSAIIKKEFRRKI-----LYQM--SPQED------STLAAMLLRPGP-----ILALR-SARFEEETGDIDK 211 (273)
T ss_pred -ccCCCCCCceeeeCHHHHHHH-----HhcC--CCHHH------HHHHHHhcCCcC-----ccccc-cccccccccccCc
Confidence 000000000000000000000 0000 00000 000000000000 00000 1111122334425
Q ss_pred ccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhh
Q 020064 267 INATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNLI 327 (331)
Q Consensus 267 ~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 327 (331)
+|+++|.|++|..+|++.++.+.+.++..+++.++ +||.++.++ |+++++.|.++...+
T Consensus 212 vP~l~I~g~~D~~ip~~~~~~m~~~~~~~~~~~l~-~gH~p~ls~-P~~~~~~i~~~a~~~ 270 (273)
T PLN02211 212 VPRVYIKTLHDHVVKPEQQEAMIKRWPPSQVYELE-SDHSPFFST-PFLLFGLLIKAAASV 270 (273)
T ss_pred cceEEEEeCCCCCCCHHHHHHHHHhCCccEEEEEC-CCCCccccC-HHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999997 899999997 999999999988765
|
|
| >KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-30 Score=197.57 Aligned_cols=283 Identities=17% Similarity=0.233 Sum_probs=165.8
Q ss_pred CCCccceeEeCCCceEEEEeCC--CCCCCcEEEeccCCC-CCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCC--cc
Q 020064 20 EPYSTGILKVSDIHTIYWEQSG--NPTGHPVVFLHGGPG-GGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLD--QN 94 (331)
Q Consensus 20 ~~~~~~~~~~~~g~~l~~~~~g--~~~~~~vl~~HG~~~-~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~--~~ 94 (331)
.++...++.+.++..+...... +.+++++|++||++. ...|......+. +.++|+++|++|+|.|+++.-.. ..
T Consensus 63 v~~~~~~v~i~~~~~iw~~~~~~~~~~~~plVliHGyGAg~g~f~~Nf~~La-~~~~vyaiDllG~G~SSRP~F~~d~~~ 141 (365)
T KOG4409|consen 63 VPYSKKYVRIPNGIEIWTITVSNESANKTPLVLIHGYGAGLGLFFRNFDDLA-KIRNVYAIDLLGFGRSSRPKFSIDPTT 141 (365)
T ss_pred CCcceeeeecCCCceeEEEeecccccCCCcEEEEeccchhHHHHHHhhhhhh-hcCceEEecccCCCCCCCCCCCCCccc
Confidence 4455667777766555544333 346789999999554 466666666664 49999999999999999776322 23
Q ss_pred chHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhh-hhHhhcccccCChhhHHhh
Q 020064 95 TTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEI-DWFYEGGAAAIYPDAWESF 173 (331)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 173 (331)
....+++-++++....++++.+|+|||+||+++..+|.+||++|+.|||++|........ .... ...+..|...
T Consensus 142 ~e~~fvesiE~WR~~~~L~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~~~-----~~~~~~w~~~ 216 (365)
T KOG4409|consen 142 AEKEFVESIEQWRKKMGLEKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEPEF-----TKPPPEWYKA 216 (365)
T ss_pred chHHHHHHHHHHHHHcCCcceeEeeccchHHHHHHHHHhChHhhceEEEecccccccCCCcchhh-----cCCChHHHhh
Confidence 345789999999999999999999999999999999999999999999999987765331 0000 0011111110
Q ss_pred h----ccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcC-----CccH-HHHHHhhhhhh
Q 020064 174 R----DLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRG-----EDDI-FSLAFARIENH 243 (331)
Q Consensus 174 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~-~~~~~~~~~~~ 243 (331)
. ....+....+.+..+...+... .....+... .. ...++.+..+ .... -...+. +
T Consensus 217 ~~~~~~~~nPl~~LR~~Gp~Gp~Lv~~------~~~d~~~k~---~~--~~~ed~l~~YiY~~n~~~psgE~~fk----~ 281 (365)
T KOG4409|consen 217 LFLVATNFNPLALLRLMGPLGPKLVSR------LRPDRFRKF---PS--LIEEDFLHEYIYHCNAQNPSGETAFK----N 281 (365)
T ss_pred hhhhhhcCCHHHHHHhccccchHHHhh------hhHHHHHhc---cc--cchhHHHHHHHHHhcCCCCcHHHHHH----H
Confidence 0 0000000000000000000000 000000000 00 0000000000 0000 000000 0
Q ss_pred hhhccCCCCCcchhhhhccccc-cccEEEEecCCCCccCCcchHHHHHhC--CCCcEEEecCCCCCCCcCCchhHHHHHH
Q 020064 244 YFLNKGFFPSDSFLLDNIDNIR-HINATIVQGRYDVCCPMMSAWDLHKAW--PEADFKVVADAGHSANEPGIAAELVATN 320 (331)
Q Consensus 244 ~~~~~~~~~~~~~~~~~l~~i~-~~P~l~i~G~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~~i 320 (331)
.+...++. ...+.+.+..++ +||+++|+|++|.+-. ..+.++.+.+ ..++.+++|++||.++.++ |+.+++.+
T Consensus 282 l~~~~g~A--r~Pm~~r~~~l~~~~pv~fiyG~~dWmD~-~~g~~~~~~~~~~~~~~~~v~~aGHhvylDn-p~~Fn~~v 357 (365)
T KOG4409|consen 282 LFEPGGWA--RRPMIQRLRELKKDVPVTFIYGDRDWMDK-NAGLEVTKSLMKEYVEIIIVPGAGHHVYLDN-PEFFNQIV 357 (365)
T ss_pred HHhccchh--hhhHHHHHHhhccCCCEEEEecCcccccc-hhHHHHHHHhhcccceEEEecCCCceeecCC-HHHHHHHH
Confidence 00011111 223344455552 4999999999998754 4556666643 4589999999999999997 99999999
Q ss_pred HHHHHhh
Q 020064 321 EKLKNLI 327 (331)
Q Consensus 321 ~~fl~~~ 327 (331)
..+++..
T Consensus 358 ~~~~~~~ 364 (365)
T KOG4409|consen 358 LEECDKV 364 (365)
T ss_pred HHHHhcc
Confidence 9999864
|
|
| >PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.1e-31 Score=203.12 Aligned_cols=224 Identities=23% Similarity=0.301 Sum_probs=149.0
Q ss_pred EEEeccCCCCCCC-CCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCcEEEEEeChhHHH
Q 020064 48 VVFLHGGPGGGTT-PSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTL 126 (331)
Q Consensus 48 vl~~HG~~~~~~~-~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~ 126 (331)
|||+||++++... ..++..+ ++||+|+++|+||+|.|........++++++++|+.++++.++.++++++|||+||.+
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l-~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~~ 79 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEAL-ARGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALGIKKVILVGHSMGGMI 79 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHH-HTTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTTTSSEEEEEETHHHHH
T ss_pred eEEECCCCCCHHHHHHHHHHH-hCCCEEEEEecCCccccccccccCCcchhhhhhhhhhccccccccccccccccccccc
Confidence 7999997776544 4455555 6899999999999999997664346889999999999999999999999999999999
Q ss_pred HHHHHHhCCCceeeEEEeccccchhhhh--hhHhhcccccCChhhHHhhhccCCcchhhhhH-HhhccccCCCchHHHHH
Q 020064 127 ALAYSLAHPDKVTGLVLRGIFLLRKKEI--DWFYEGGAAAIYPDAWESFRDLIPENERSCFV-DAYSKRLNSDDKETQYA 203 (331)
Q Consensus 127 a~~~a~~~p~~v~~li~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 203 (331)
++.++.++|++|+++|+++++....... ... +..+.......... ...+. ..+.........
T Consensus 80 a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----- 144 (228)
T PF12697_consen 80 ALRLAARYPDRVKGLVLLSPPPPLPDSPSRSFG---------PSFIRRLLAWRSRS-LRRLASRFFYRWFDGDEP----- 144 (228)
T ss_dssp HHHHHHHSGGGEEEEEEESESSSHHHHHCHHHH---------HHHHHHHHHHHHHH-HHHHHHHHHHHHHTHHHH-----
T ss_pred ccccccccccccccceeeccccccccccccccc---------chhhhhhhhccccc-cccccccccccccccccc-----
Confidence 9999999999999999999987543211 000 00000000000000 00000 000000000000
Q ss_pred HHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCCCccCCc
Q 020064 204 AARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMM 283 (331)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~ 283 (331)
...... ....+...+... ....+....+.++ ++|+++++|++|.+++.+
T Consensus 145 ------------------~~~~~~-~~~~~~~~~~~~-----------~~~~~~~~~~~~~-~~pvl~i~g~~D~~~~~~ 193 (228)
T PF12697_consen 145 ------------------EDLIRS-SRRALAEYLRSN-----------LWQADLSEALPRI-KVPVLVIHGEDDPIVPPE 193 (228)
T ss_dssp ------------------HHHHHH-HHHHHHHHHHHH-----------HHHHHHHHHHHGS-SSEEEEEEETTSSSSHHH
T ss_pred ------------------cccccc-cccccccccccc-----------ccccccccccccc-CCCeEEeecCCCCCCCHH
Confidence 000000 000000000000 0033455678888 599999999999999999
Q ss_pred chHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHH
Q 020064 284 SAWDLHKAWPEADFKVVADAGHSANEPGIAAELVAT 319 (331)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~ 319 (331)
..+.+.+.++++++++++++||+++.++ |++++++
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~gH~~~~~~-p~~~~~a 228 (228)
T PF12697_consen 194 SAEELADKLPNAELVVIPGAGHFLFLEQ-PDEVAEA 228 (228)
T ss_dssp HHHHHHHHSTTEEEEEETTSSSTHHHHS-HHHHHHH
T ss_pred HHHHHHHHCCCCEEEEECCCCCccHHHC-HHHHhcC
Confidence 9999999999999999999999999997 9998764
|
... |
| >COG2267 PldB Lysophospholipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-30 Score=204.86 Aligned_cols=276 Identities=16% Similarity=0.127 Sum_probs=177.7
Q ss_pred CCCCccceeEeCCCceEEEEeCCCCCC--CcEEEeccCC-CCCCCCCcccccCCCCcEEEEecCCCCCCCC-CCCCCCcc
Q 020064 19 VEPYSTGILKVSDIHTIYWEQSGNPTG--HPVVFLHGGP-GGGTTPSNRRFFDPDFYRIILFDQRGAGKST-PHACLDQN 94 (331)
Q Consensus 19 ~~~~~~~~~~~~~g~~l~~~~~g~~~~--~~vl~~HG~~-~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~-~~~~~~~~ 94 (331)
....++.++...||..++|..+-.++. .+||++||.. .+..+..++..+...||.|+++|+||||.|. .... ...
T Consensus 6 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~g~Vvl~HG~~Eh~~ry~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg-~~~ 84 (298)
T COG2267 6 PRTRTEGYFTGADGTRLRYRTWAAPEPPKGVVVLVHGLGEHSGRYEELADDLAARGFDVYALDLRGHGRSPRGQRG-HVD 84 (298)
T ss_pred ccccccceeecCCCceEEEEeecCCCCCCcEEEEecCchHHHHHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCcC-Cch
Confidence 344567788888999999998875434 5799999955 4577888899999999999999999999997 3332 345
Q ss_pred chHHHHHHHHHHHHHhC----CCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhh--hhhhHhhcccccCChh
Q 020064 95 TTWDLIDDIEKLRQHLE----IPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKK--EIDWFYEGGAAAIYPD 168 (331)
Q Consensus 95 ~~~~~~~~~~~~~~~~~----~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~--~~~~~~~~~~~~~~~~ 168 (331)
++.++.+|+..+++... ..+++++||||||.+++.++.+++.+++++|+.+|...... ..........
T Consensus 85 ~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~~~~~~~~~~~~~------ 158 (298)
T COG2267 85 SFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGGAILRLILARLAL------ 158 (298)
T ss_pred hHHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCChhHHHHHHHHHhc------
Confidence 68999999999998875 35899999999999999999999999999999999776542 0000000000
Q ss_pred hHHhhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhcc
Q 020064 169 AWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNK 248 (331)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (331)
.....+...+.... . . .+.........+++....+..+.....-.. ...++...
T Consensus 159 ---------------~~~~~~~p~~~~~~-~-~--------~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~-~~~w~~~~ 212 (298)
T COG2267 159 ---------------KLLGRIRPKLPVDS-N-L--------LEGVLTDDLSRDPAEVAAYEADPLIGVGGP-VSRWVDLA 212 (298)
T ss_pred ---------------ccccccccccccCc-c-c--------ccCcCcchhhcCHHHHHHHhcCCccccCCc-cHHHHHHH
Confidence 00000000000000 0 0 000011111122222222222211000000 00000000
Q ss_pred CCCCCcchhhhhccccccccEEEEecCCCCccC-CcchHHHHHhC--CCCcEEEecCCCCCCCcCCch--hHHHHHHHHH
Q 020064 249 GFFPSDSFLLDNIDNIRHINATIVQGRYDVCCP-MMSAWDLHKAW--PEADFKVVADAGHSANEPGIA--AELVATNEKL 323 (331)
Q Consensus 249 ~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~-~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~--~~~~~~i~~f 323 (331)
.... .........++ ++|+|+++|++|.+++ .+...++.+.. +++++++++|+.|.++.|... +++.+.+.+|
T Consensus 213 ~~a~-~~~~~~~~~~~-~~PvLll~g~~D~vv~~~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~ 290 (298)
T COG2267 213 LLAG-RVPALRDAPAI-ALPVLLLQGGDDRVVDNVEGLARFFERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDILAW 290 (298)
T ss_pred HHhh-cccchhccccc-cCCEEEEecCCCccccCcHHHHHHHHhcCCCCceEEecCCcchhhhcCcchHHHHHHHHHHHH
Confidence 0000 11123345567 6999999999999999 67777777665 678999999999999888767 9999999999
Q ss_pred HHhhhc
Q 020064 324 KNLIKN 329 (331)
Q Consensus 324 l~~~~~ 329 (331)
+.+..+
T Consensus 291 l~~~~~ 296 (298)
T COG2267 291 LAEALP 296 (298)
T ss_pred HHhhcc
Confidence 987654
|
|
| >PLN02894 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.7e-29 Score=204.94 Aligned_cols=272 Identities=18% Similarity=0.195 Sum_probs=152.4
Q ss_pred eEEEEeC-CCCCCCcEEEeccCCCCCC-CCCcccccCCCCcEEEEecCCCCCCCCCCCCCCc---cchHHHHHHHHHHHH
Q 020064 34 TIYWEQS-GNPTGHPVVFLHGGPGGGT-TPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQ---NTTWDLIDDIEKLRQ 108 (331)
Q Consensus 34 ~l~~~~~-g~~~~~~vl~~HG~~~~~~-~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~---~~~~~~~~~~~~~~~ 108 (331)
.+++... +++++|+|||+||++++.. |...+..+ .++|+|+++|+||||.|+.+..... ...+.+++++.++++
T Consensus 93 ~~~~~~~~~~~~~p~vvllHG~~~~~~~~~~~~~~L-~~~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~ 171 (402)
T PLN02894 93 FINTVTFDSKEDAPTLVMVHGYGASQGFFFRNFDAL-ASRFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRK 171 (402)
T ss_pred eEEEEEecCCCCCCEEEEECCCCcchhHHHHHHHHH-HhCCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHH
Confidence 4544333 3446789999999876543 44455554 4579999999999999986542101 112246778888888
Q ss_pred HhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHh
Q 020064 109 HLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDA 188 (331)
Q Consensus 109 ~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (331)
.++.++++++||||||.+++.+|.++|++++++|++++.........+... .... ...|.. .....
T Consensus 172 ~l~~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~--~~~~-~~~~~~-----------~~~~~ 237 (402)
T PLN02894 172 AKNLSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAGFSSESDDKSEW--LTKF-RATWKG-----------AVLNH 237 (402)
T ss_pred HcCCCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCccccCCcchhHHH--Hhhc-chhHHH-----------HHHHH
Confidence 899999999999999999999999999999999999986543221110000 0000 000000 00000
Q ss_pred hccccCCCchHHHH--------HHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhh------hh---hhhhhccCCC
Q 020064 189 YSKRLNSDDKETQY--------AAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFAR------IE---NHYFLNKGFF 251 (331)
Q Consensus 189 ~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~---~~~~~~~~~~ 251 (331)
+..... .+.... .....+.. ..+..... ...+.......+...... .. ..+.......
T Consensus 238 ~~~~~~--~p~~~~~~~gp~~~~l~~~~~~-~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (402)
T PLN02894 238 LWESNF--TPQKIIRGLGPWGPNLVRRYTT-ARFGAHST--GDILSEEESKLLTDYVYHTLAAKASGELCLKYIFSFGAF 312 (402)
T ss_pred HhhcCC--CHHHHHHhccchhHHHHHHHHH-HHhhhccc--ccccCcchhhHHHHHHHHhhcCCCchHHHHHHhccCchh
Confidence 000000 000000 00000000 00000000 000000000000000000 00 0000000001
Q ss_pred CCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhC-CCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhhhc
Q 020064 252 PSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAW-PEADFKVVADAGHSANEPGIAAELVATNEKLKNLIKN 329 (331)
Q Consensus 252 ~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~~ 329 (331)
...+....+.++ ++|+++|+|++|.+.+ .....+.+.. +.+++++++++||+++.|+ |+++.+.|.+|++....
T Consensus 313 -~~~~~~~~l~~I-~vP~liI~G~~D~i~~-~~~~~~~~~~~~~~~~~~i~~aGH~~~~E~-P~~f~~~l~~~~~~~~~ 387 (402)
T PLN02894 313 -ARKPLLESASEW-KVPTTFIYGRHDWMNY-EGAVEARKRMKVPCEIIRVPQGGHFVFLDN-PSGFHSAVLYACRKYLS 387 (402)
T ss_pred -hcchHhhhcccC-CCCEEEEEeCCCCCCc-HHHHHHHHHcCCCCcEEEeCCCCCeeeccC-HHHHHHHHHHHHHHhcc
Confidence 134455678889 5999999999998765 5555566555 4689999999999999997 99999999999887643
|
|
| >PLN02511 hydrolase | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.5e-30 Score=209.39 Aligned_cols=272 Identities=15% Similarity=0.158 Sum_probs=159.1
Q ss_pred CCCccceeEeCCCceEEEEeC------CCCCCCcEEEeccCCCCCC--C-CCcccccCCCCcEEEEecCCCCCCCCCCCC
Q 020064 20 EPYSTGILKVSDIHTIYWEQS------GNPTGHPVVFLHGGPGGGT--T-PSNRRFFDPDFYRIILFDQRGAGKSTPHAC 90 (331)
Q Consensus 20 ~~~~~~~~~~~~g~~l~~~~~------g~~~~~~vl~~HG~~~~~~--~-~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~ 90 (331)
..+++..+.+.||..+.+... .+.++|+||++||+.++.. | ...+..++++||+|+++|+||||.|....
T Consensus 69 ~~~~re~l~~~DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~- 147 (388)
T PLN02511 69 VRYRRECLRTPDGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTT- 147 (388)
T ss_pred CceeEEEEECCCCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCC-
Confidence 345667889999988875322 2345778999999765533 2 23455566899999999999999997543
Q ss_pred CCccchHHHHHHHHHHHHHhCC----CcEEEEEeChhHHHHHHHHHhCCCc--eeeEEEeccccchhhhhhhHhhccccc
Q 020064 91 LDQNTTWDLIDDIEKLRQHLEI----PEWQVFGGSWGSTLALAYSLAHPDK--VTGLVLRGIFLLRKKEIDWFYEGGAAA 164 (331)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~----~~v~lvG~S~Gg~~a~~~a~~~p~~--v~~li~~~~~~~~~~~~~~~~~~~~~~ 164 (331)
.......+.+|+.++++.++. .+++++||||||.+++.++.++|++ +.++++++++.........+.. +...
T Consensus 148 -~~~~~~~~~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~~~~~~~-~~~~ 225 (388)
T PLN02511 148 -PQFYSASFTGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIADEDFHK-GFNN 225 (388)
T ss_pred -cCEEcCCchHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHHHHHHhc-cHHH
Confidence 122234567777777777654 5899999999999999999999987 8888888765532111100000 0000
Q ss_pred CChhhHHhhhccCCcchhhhhHHh---hccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhc-CCccHHHHHHhhh
Q 020064 165 IYPDAWESFRDLIPENERSCFVDA---YSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKR-GEDDIFSLAFARI 240 (331)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 240 (331)
.+... +...+ ...... ....+.. ..+...... .....+...+...
T Consensus 226 ~y~~~---~~~~l-----~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~fd~~~t~~ 274 (388)
T PLN02511 226 VYDKA---LAKAL-----RKIFAKHALLFEGLGG-----------------------EYNIPLVANAKTVRDFDDGLTRV 274 (388)
T ss_pred HHHHH---HHHHH-----HHHHHHHHHHHhhCCC-----------------------ccCHHHHHhCCCHHHHHHhhhhh
Confidence 00000 00000 000000 0000000 000000000 0000000000000
Q ss_pred hhhhhhccCCCCCcchhhhhccccccccEEEEecCCCCccCCcch-HHHHHhCCCCcEEEecCCCCCCCcCCchhH----
Q 020064 241 ENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSA-WDLHKAWPEADFKVVADAGHSANEPGIAAE---- 315 (331)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~-~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~---- 315 (331)
...+.....++. ..+....+.+| ++|+|+|+|++|+++|++.. ....+.+|++++++++++||+.+.|. ++.
T Consensus 275 ~~gf~~~~~yy~-~~s~~~~L~~I-~vPtLiI~g~dDpi~p~~~~~~~~~~~~p~~~l~~~~~gGH~~~~E~-p~~~~~~ 351 (388)
T PLN02511 275 SFGFKSVDAYYS-NSSSSDSIKHV-RVPLLCIQAANDPIAPARGIPREDIKANPNCLLIVTPSGGHLGWVAG-PEAPFGA 351 (388)
T ss_pred cCCCCCHHHHHH-HcCchhhhccC-CCCeEEEEcCCCCcCCcccCcHhHHhcCCCEEEEECCCcceeccccC-CCCCCCC
Confidence 000000000000 12234578889 59999999999999998765 45667789999999999999999886 654
Q ss_pred --HHHHHHHHHHhhh
Q 020064 316 --LVATNEKLKNLIK 328 (331)
Q Consensus 316 --~~~~i~~fl~~~~ 328 (331)
+.+.+.+|++.+.
T Consensus 352 ~w~~~~i~~Fl~~~~ 366 (388)
T PLN02511 352 PWTDPVVMEFLEALE 366 (388)
T ss_pred ccHHHHHHHHHHHHH
Confidence 5889999998764
|
|
| >TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-29 Score=197.81 Aligned_cols=244 Identities=20% Similarity=0.256 Sum_probs=152.0
Q ss_pred CCcEEEeccCCCCCCC-CCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHH-HHHHHHHhCCCcEEEEEeCh
Q 020064 45 GHPVVFLHGGPGGGTT-PSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDD-IEKLRQHLEIPEWQVFGGSW 122 (331)
Q Consensus 45 ~~~vl~~HG~~~~~~~-~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~lvG~S~ 122 (331)
+|+||++||++++... ......+ .+||+|+++|+||+|.|..+......++++++++ +..+++.++.++++++|||+
T Consensus 1 ~~~vv~~hG~~~~~~~~~~~~~~L-~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~ 79 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADWQALIELL-GPHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQLGIEPFFLVGYSM 79 (251)
T ss_pred CCEEEEEcCCCCchhhHHHHHHHh-cccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHcCCCeEEEEEecc
Confidence 4789999997766554 4445555 4899999999999999987654456788999999 78888999889999999999
Q ss_pred hHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhccc--cCC---Cc
Q 020064 123 GSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKR--LNS---DD 197 (331)
Q Consensus 123 Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---~~ 197 (331)
||.+++.+|.++|+++++++++++................ ...+... +.......+...+... +.. ..
T Consensus 80 Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~~~~~~~~----~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (251)
T TIGR03695 80 GGRIALYYALQYPERVQGLILESGSPGLATEEERAARRQN----DEQLAQR---FEQEGLEAFLDDWYQQPLFASQKNLP 152 (251)
T ss_pred HHHHHHHHHHhCchheeeeEEecCCCCcCchHhhhhhhhc----chhhhhH---HHhcCccHHHHHHhcCceeeecccCC
Confidence 9999999999999999999999876533211110000000 0000000 0000000111111100 000 00
Q ss_pred hHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCC
Q 020064 198 KETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYD 277 (331)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D 277 (331)
......... ......+ ......+... ... ...+....+.++ ++|+++++|++|
T Consensus 153 ~~~~~~~~~---------~~~~~~~--------~~~~~~~~~~--------~~~-~~~~~~~~~~~~-~~P~l~i~g~~D 205 (251)
T TIGR03695 153 PEQRQALRA---------KRLANNP--------EGLAKMLRAT--------GLG-KQPSLWPKLQAL-TIPVLYLCGEKD 205 (251)
T ss_pred hHHhHHHHH---------hcccccc--------hHHHHHHHHh--------hhh-cccchHHHhhCC-CCceEEEeeCcc
Confidence 000000000 0000000 0000000000 000 022334567788 599999999999
Q ss_pred CccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHH
Q 020064 278 VCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKN 325 (331)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~ 325 (331)
..++ +..+.+.+..+++++++++++||+++.++ ++++.+.|.+|++
T Consensus 206 ~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~e~-~~~~~~~i~~~l~ 251 (251)
T TIGR03695 206 EKFV-QIAKEMQKLLPNLTLVIIANAGHNIHLEN-PEAFAKILLAFLE 251 (251)
T ss_pred hHHH-HHHHHHHhcCCCCcEEEEcCCCCCcCccC-hHHHHHHHHHHhC
Confidence 8774 56777888889999999999999999997 9999999999984
|
This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase. |
| >KOG1455 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3e-29 Score=187.14 Aligned_cols=269 Identities=12% Similarity=0.042 Sum_probs=175.1
Q ss_pred CCCccceeEeCCCceEEEEeCCCCC--CC--cEEEeccCCCC--CCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCc
Q 020064 20 EPYSTGILKVSDIHTIYWEQSGNPT--GH--PVVFLHGGPGG--GTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQ 93 (331)
Q Consensus 20 ~~~~~~~~~~~~g~~l~~~~~g~~~--~~--~vl~~HG~~~~--~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~ 93 (331)
......+++..+|.++.+..+-+.+ .| .|+++||++.. ..+...+..+...||.|+++|++|||.|++... .-
T Consensus 25 ~~~~~~~~~n~rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~~-yi 103 (313)
T KOG1455|consen 25 VTYSESFFTNPRGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLHA-YV 103 (313)
T ss_pred cceeeeeEEcCCCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCcc-cC
Confidence 3455678888899899988776533 22 58999996654 345667888889999999999999999996654 34
Q ss_pred cchHHHHHHHHHHHHHhC------CCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCCh
Q 020064 94 NTTWDLIDDIEKLRQHLE------IPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYP 167 (331)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~------~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (331)
.+++.+++|+....+... ..+.+++||||||.+++.++.++|+..+|+|+++|.......... +....
T Consensus 104 ~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp------~p~v~ 177 (313)
T KOG1455|consen 104 PSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKP------HPPVI 177 (313)
T ss_pred CcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccCC------CcHHH
Confidence 578889999988887642 237999999999999999999999999999999997764322100 00000
Q ss_pred hhHHhhhccCCcchhhhhHHhhccccCCCchH-HHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhh
Q 020064 168 DAWESFRDLIPENERSCFVDAYSKRLNSDDKE-TQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFL 246 (331)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (331)
.. ...+..+.+.+...... ......+. .........++..............+.
T Consensus 178 ~~-------------l~~l~~liP~wk~vp~~d~~~~~~kd----p~~r~~~~~npl~y~g~pRl~T~~ElL-------- 232 (313)
T KOG1455|consen 178 SI-------------LTLLSKLIPTWKIVPTKDIIDVAFKD----PEKRKILRSDPLCYTGKPRLKTAYELL-------- 232 (313)
T ss_pred HH-------------HHHHHHhCCceeecCCccccccccCC----HHHHHHhhcCCceecCCccHHHHHHHH--------
Confidence 00 01111111111100000 00000000 000000111111111111111111111
Q ss_pred ccCCCCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhC--CCCcEEEecCCCCCCCc---CCchhHHHHHHH
Q 020064 247 NKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAW--PEADFKVVADAGHSANE---PGIAAELVATNE 321 (331)
Q Consensus 247 ~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~---~~~~~~~~~~i~ 321 (331)
+...++.+.+.++ ++|.+|+||++|.++.++.++.+.+.. .+.++.++||.-|.++. ++..+.|...|.
T Consensus 233 -----r~~~~le~~l~~v-tvPflilHG~dD~VTDp~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~ 306 (313)
T KOG1455|consen 233 -----RVTADLEKNLNEV-TVPFLILHGTDDKVTDPKVSKELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDII 306 (313)
T ss_pred -----HHHHHHHHhcccc-cccEEEEecCCCcccCcHHHHHHHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHHHH
Confidence 1144566788899 699999999999999999999999987 47899999999998873 334788999999
Q ss_pred HHHHh
Q 020064 322 KLKNL 326 (331)
Q Consensus 322 ~fl~~ 326 (331)
+||++
T Consensus 307 ~Wl~~ 311 (313)
T KOG1455|consen 307 SWLDE 311 (313)
T ss_pred HHHHh
Confidence 99875
|
|
| >PLN02652 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.4e-29 Score=201.81 Aligned_cols=265 Identities=13% Similarity=0.070 Sum_probs=161.5
Q ss_pred ccceeEeCCCceEEEEeCCCC---CCCcEEEeccCCCCCC-CCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHH
Q 020064 23 STGILKVSDIHTIYWEQSGNP---TGHPVVFLHGGPGGGT-TPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWD 98 (331)
Q Consensus 23 ~~~~~~~~~g~~l~~~~~g~~---~~~~vl~~HG~~~~~~-~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~ 98 (331)
....+...++..++|..+.+. ..++||++||++++.. |..++..+.++||+|+++|+||||.|+.... ...+++.
T Consensus 111 ~~~~~~~~~~~~l~~~~~~p~~~~~~~~Vl~lHG~~~~~~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~-~~~~~~~ 189 (395)
T PLN02652 111 ATSLFYGARRNALFCRSWAPAAGEMRGILIIIHGLNEHSGRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHG-YVPSLDY 189 (395)
T ss_pred EEEEEECCCCCEEEEEEecCCCCCCceEEEEECCchHHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCC-CCcCHHH
Confidence 334555566668887776542 2357999999776544 5566777777899999999999999986542 2357788
Q ss_pred HHHHHHHHHHHhCC----CcEEEEEeChhHHHHHHHHHhCCC---ceeeEEEeccccchhhhhhhHhhcccccCChhhHH
Q 020064 99 LIDDIEKLRQHLEI----PEWQVFGGSWGSTLALAYSLAHPD---KVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWE 171 (331)
Q Consensus 99 ~~~~~~~~~~~~~~----~~v~lvG~S~Gg~~a~~~a~~~p~---~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (331)
+++|+..+++.+.. .+++++||||||.+++.++. +|+ +++++|+.+|............. ......
T Consensus 190 ~~~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~~~~~~~------~~~l~~ 262 (395)
T PLN02652 190 VVEDTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPAHPIVGA------VAPIFS 262 (395)
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccccchHHHHH------HHHHHH
Confidence 89999999888753 37999999999999998764 554 89999999886432111000000 000000
Q ss_pred hhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCC
Q 020064 172 SFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFF 251 (331)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (331)
....... .... ........ ..... .... .. ++..................
T Consensus 263 ~~~p~~~---~~~~-~~~~~~~s-~~~~~---~~~~------~~-----dp~~~~g~i~~~~~~~~~~~----------- 312 (395)
T PLN02652 263 LVAPRFQ---FKGA-NKRGIPVS-RDPAA---LLAK------YS-----DPLVYTGPIRVRTGHEILRI----------- 312 (395)
T ss_pred HhCCCCc---ccCc-ccccCCcC-CCHHH---HHHH------hc-----CCCcccCCchHHHHHHHHHH-----------
Confidence 0000000 0000 00000000 00000 0000 00 00000000000000000000
Q ss_pred CCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCC--CCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhhh
Q 020064 252 PSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWP--EADFKVVADAGHSANEPGIAAELVATNEKLKNLIK 328 (331)
Q Consensus 252 ~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~ 328 (331)
.....+.+.++ ++|+|+++|++|.++|++.++.+++.++ +++++++++++|.++.+..++++.+.|.+|++...
T Consensus 313 --~~~l~~~L~~I-~vPvLIi~G~~D~vvp~~~a~~l~~~~~~~~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~~~ 388 (395)
T PLN02652 313 --SSYLTRNFKSV-TVPFMVLHGTADRVTDPLASQDLYNEAASRHKDIKLYDGFLHDLLFEPEREEVGRDIIDWMEKRL 388 (395)
T ss_pred --HHHHHhhcccC-CCCEEEEEeCCCCCCCHHHHHHHHHhcCCCCceEEEECCCeEEeccCCCHHHHHHHHHHHHHHHh
Confidence 11234567888 6999999999999999999999988864 47899999999999777559999999999998754
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.5e-28 Score=214.08 Aligned_cols=286 Identities=14% Similarity=0.094 Sum_probs=159.7
Q ss_pred ceeEeCCCceEEEEeCCCCCCCcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHH
Q 020064 25 GILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIE 104 (331)
Q Consensus 25 ~~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~ 104 (331)
.++...+|.+++|...|++++|+|||+||++++...|......+.++|+|+++|+||||.|........++++++++|+.
T Consensus 5 ~~~~~~~g~~l~~~~~g~~~~~~ivllHG~~~~~~~w~~~~~~L~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~dl~ 84 (582)
T PRK05855 5 RTVVSSDGVRLAVYEWGDPDRPTVVLVHGYPDNHEVWDGVAPLLADRFRVVAYDVRGAGRSSAPKRTAAYTLARLADDFA 84 (582)
T ss_pred EEEEeeCCEEEEEEEcCCCCCCeEEEEcCCCchHHHHHHHHHHhhcceEEEEecCCCCCCCCCCCcccccCHHHHHHHHH
Confidence 33444577799999999777899999999877655444334444789999999999999998655434688999999999
Q ss_pred HHHHHhCCCc-EEEEEeChhHHHHHHHHHhC--CCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcch
Q 020064 105 KLRQHLEIPE-WQVFGGSWGSTLALAYSLAH--PDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENE 181 (331)
Q Consensus 105 ~~~~~~~~~~-v~lvG~S~Gg~~a~~~a~~~--p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (331)
.+++.++..+ ++|+||||||.+++.++... ++++..++.++++..... ..+... ......+..+.........
T Consensus 85 ~~i~~l~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~-- 160 (582)
T PRK05855 85 AVIDAVSPDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSLDHV-GFWLRS-GLRRPTPRRLARALGQLLR-- 160 (582)
T ss_pred HHHHHhCCCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCchHHH-HHHHhh-cccccchhhhhHHHHHHhh--
Confidence 9999998765 99999999999999887762 345555555443321100 000000 0000000000000000000
Q ss_pred hhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhc
Q 020064 182 RSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNI 261 (331)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 261 (331)
........................+..................... ........ .+..... .......+
T Consensus 161 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-----~~~~~~~---~~~~~~~~ 229 (582)
T PRK05855 161 --SWYIYLFHLPVLPELLWRLGLGRAWPRLLRRVEGTPVDPIPTQTTL-SDGAHGVK-----LYRANMI---RSLSRPRE 229 (582)
T ss_pred --hHHHHHHhCCCCcHHHhccchhhHHHHhhhhccCCCcchhhhhhhh-ccccchHH-----HHHhhhh---hhhccCcc
Confidence 0000000000000000000000000000000000000000000000 00000000 0000000 00111224
Q ss_pred cccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhhh
Q 020064 262 DNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNLIK 328 (331)
Q Consensus 262 ~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~ 328 (331)
..+ ++|+|+|+|++|.++|++..+.+.+.+++.++++++ +||+++.+. |+++.+.|.+|+++..
T Consensus 230 ~~~-~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~-~gH~~~~e~-p~~~~~~i~~fl~~~~ 293 (582)
T PRK05855 230 RYT-DVPVQLIVPTGDPYVRPALYDDLSRWVPRLWRREIK-AGHWLPMSH-PQVLAAAVAEFVDAVE 293 (582)
T ss_pred CCc-cCceEEEEeCCCcccCHHHhccccccCCcceEEEcc-CCCcchhhC-hhHHHHHHHHHHHhcc
Confidence 457 599999999999999999888888888888888886 799999997 9999999999998764
|
|
| >PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.1e-28 Score=229.28 Aligned_cols=256 Identities=18% Similarity=0.176 Sum_probs=159.1
Q ss_pred EEEEeCCC-CCCCcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCC------CCccchHHHHHHHHHHH
Q 020064 35 IYWEQSGN-PTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHAC------LDQNTTWDLIDDIEKLR 107 (331)
Q Consensus 35 l~~~~~g~-~~~~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~------~~~~~~~~~~~~~~~~~ 107 (331)
++|...|. +++++|||+||++++...|......+.++|+|+++|+||||.|..... ...++++++++++..++
T Consensus 1360 i~~~~~G~~~~~~~vVllHG~~~s~~~w~~~~~~L~~~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll 1439 (1655)
T PLN02980 1360 IKVHEVGQNAEGSVVLFLHGFLGTGEDWIPIMKAISGSARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLI 1439 (1655)
T ss_pred EEEEecCCCCCCCeEEEECCCCCCHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHH
Confidence 45566664 346899999998777554443333445679999999999999975421 13468899999999999
Q ss_pred HHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHH
Q 020064 108 QHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVD 187 (331)
Q Consensus 108 ~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (331)
++++.++++|+||||||.+++.++.++|++|+++|++++.+.......+..... ...... ..+.......+..
T Consensus 1440 ~~l~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~~~~~~~~~~----~~~~~~---~~l~~~g~~~~~~ 1512 (1655)
T PLN02980 1440 EHITPGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKDEVARKIRSA----KDDSRA---RMLIDHGLEIFLE 1512 (1655)
T ss_pred HHhCCCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCchHHHHHHhh----hhhHHH---HHHHhhhHHHHHH
Confidence 999999999999999999999999999999999999986543211100000000 000000 0000000000000
Q ss_pred hhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhh---h----hcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhh
Q 020064 188 AYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEEN---I----KRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDN 260 (331)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (331)
.+.. . .... .....+.. . .......+...+.. .... ...+..+.
T Consensus 1513 ~~~~----~---------------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--------~~~~-~~~dl~~~ 1563 (1655)
T PLN02980 1513 NWYS----G---------------ELWK-SLRNHPHFNKIVASRLLHKDVPSLAKLLSD--------LSIG-RQPSLWED 1563 (1655)
T ss_pred Hhcc----H---------------HHhh-hhccCHHHHHHHHHHHhcCCHHHHHHHHHH--------hhhc-ccchHHHH
Confidence 0000 0 0000 00000000 0 00000000000000 0000 13345567
Q ss_pred ccccccccEEEEecCCCCccCCcchHHHHHhCCC------------CcEEEecCCCCCCCcCCchhHHHHHHHHHHHhhh
Q 020064 261 IDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPE------------ADFKVVADAGHSANEPGIAAELVATNEKLKNLIK 328 (331)
Q Consensus 261 l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~------------~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~ 328 (331)
+.++ ++|+|+|+|++|..++ +.++++.+.+++ +++++++++||.++.|+ |+++++.|.+|+++..
T Consensus 1564 L~~I-~~PtLlI~Ge~D~~~~-~~a~~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~-Pe~f~~~I~~FL~~~~ 1640 (1655)
T PLN02980 1564 LKQC-DTPLLLVVGEKDVKFK-QIAQKMYREIGKSKESGNDKGKEIIEIVEIPNCGHAVHLEN-PLPVIRALRKFLTRLH 1640 (1655)
T ss_pred HhhC-CCCEEEEEECCCCccH-HHHHHHHHHccccccccccccccceEEEEECCCCCchHHHC-HHHHHHHHHHHHHhcc
Confidence 8999 5999999999999875 667778887765 48999999999999997 9999999999999875
Q ss_pred c
Q 020064 329 N 329 (331)
Q Consensus 329 ~ 329 (331)
+
T Consensus 1641 ~ 1641 (1655)
T PLN02980 1641 N 1641 (1655)
T ss_pred c
Confidence 4
|
|
| >COG1647 Esterase/lipase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-27 Score=169.86 Aligned_cols=223 Identities=18% Similarity=0.157 Sum_probs=152.8
Q ss_pred CCcEEEeccCCCCCC-CCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHH---hCCCcEEEEEe
Q 020064 45 GHPVVFLHGGPGGGT-TPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQH---LEIPEWQVFGG 120 (331)
Q Consensus 45 ~~~vl~~HG~~~~~~-~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~lvG~ 120 (331)
+..|||+||+.|+.. ...+.+.+.++||.|.+|.+||||...... -..+.++|-+++.+.-+. .+.+.|.++|.
T Consensus 15 ~~AVLllHGFTGt~~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~f--l~t~~~DW~~~v~d~Y~~L~~~gy~eI~v~Gl 92 (243)
T COG1647 15 NRAVLLLHGFTGTPRDVRMLGRYLNENGYTVYAPRYPGHGTLPEDF--LKTTPRDWWEDVEDGYRDLKEAGYDEIAVVGL 92 (243)
T ss_pred CEEEEEEeccCCCcHHHHHHHHHHHHCCceEecCCCCCCCCCHHHH--hcCCHHHHHHHHHHHHHHHHHcCCCeEEEEee
Confidence 378999999888755 577788888899999999999999886433 356778887777665554 46789999999
Q ss_pred ChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhccccCCCchHH
Q 020064 121 SWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKET 200 (331)
Q Consensus 121 S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (331)
||||.+++.+|.++| ++++|.++++....... .....+. ...+.+ ......+...
T Consensus 93 SmGGv~alkla~~~p--~K~iv~m~a~~~~k~~~-------------~iie~~l---------~y~~~~-kk~e~k~~e~ 147 (243)
T COG1647 93 SMGGVFALKLAYHYP--PKKIVPMCAPVNVKSWR-------------IIIEGLL---------EYFRNA-KKYEGKDQEQ 147 (243)
T ss_pred cchhHHHHHHHhhCC--ccceeeecCCcccccch-------------hhhHHHH---------HHHHHh-hhccCCCHHH
Confidence 999999999999998 99999999876532110 0000000 000011 1111111111
Q ss_pred HHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCCCcc
Q 020064 201 QYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCC 280 (331)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~ 280 (331)
.......+.. . .......+..+ ..+....+..| ..|+++++|.+|+++
T Consensus 148 ~~~e~~~~~~---------~---------~~~~~~~~~~~-------------i~~~~~~~~~I-~~pt~vvq~~~D~mv 195 (243)
T COG1647 148 IDKEMKSYKD---------T---------PMTTTAQLKKL-------------IKDARRSLDKI-YSPTLVVQGRQDEMV 195 (243)
T ss_pred HHHHHHHhhc---------c---------hHHHHHHHHHH-------------HHHHHhhhhhc-ccchhheecccCCCC
Confidence 1111111100 0 00000001100 33456678899 599999999999999
Q ss_pred CCcchHHHHHhC--CCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHh
Q 020064 281 PMMSAWDLHKAW--PEADFKVVADAGHSANEPGIAAELVATNEKLKNL 326 (331)
Q Consensus 281 ~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 326 (331)
|.+.+..+.+.. .+.++..++++||.+..+...+.+.+.+..||+.
T Consensus 196 ~~~sA~~Iy~~v~s~~KeL~~~e~SgHVIt~D~Erd~v~e~V~~FL~~ 243 (243)
T COG1647 196 PAESANFIYDHVESDDKELKWLEGSGHVITLDKERDQVEEDVITFLEK 243 (243)
T ss_pred CHHHHHHHHHhccCCcceeEEEccCCceeecchhHHHHHHHHHHHhhC
Confidence 999999999988 3578999999999998877799999999999963
|
|
| >KOG2984 consensus Predicted hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.4e-27 Score=163.94 Aligned_cols=250 Identities=16% Similarity=0.178 Sum_probs=163.4
Q ss_pred CCccceeEeCCCceEEEEeCCCCCCC-cEEEeccCCCC-CC-CCCcccccCC-CCcEEEEecCCCCCCCCCCCCCCccch
Q 020064 21 PYSTGILKVSDIHTIYWEQSGNPTGH-PVVFLHGGPGG-GT-TPSNRRFFDP-DFYRIILFDQRGAGKSTPHACLDQNTT 96 (331)
Q Consensus 21 ~~~~~~~~~~~g~~l~~~~~g~~~~~-~vl~~HG~~~~-~~-~~~~~~~~~~-~g~~vi~~D~~G~G~s~~~~~~~~~~~ 96 (331)
.+++..+.+++. ++.|..+| .+| .|++++|..++ .. +......+.. ..+.||++|.||+|.|.++.. ....
T Consensus 20 ~~te~kv~vng~-ql~y~~~G--~G~~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~R--kf~~ 94 (277)
T KOG2984|consen 20 DYTESKVHVNGT-QLGYCKYG--HGPNYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPER--KFEV 94 (277)
T ss_pred hhhhheeeecCc-eeeeeecC--CCCceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcc--cchH
Confidence 345566666555 99999999 454 68999995444 32 3333332322 349999999999999987763 3333
Q ss_pred ---HHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhh
Q 020064 97 ---WDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESF 173 (331)
Q Consensus 97 ---~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (331)
..-+++...+++.++.+++.++|+|-||..++..|+++++.|.++|+.++............+ .+
T Consensus 95 ~ff~~Da~~avdLM~aLk~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~ma~k------------gi 162 (277)
T KOG2984|consen 95 QFFMKDAEYAVDLMEALKLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGAMAFK------------GI 162 (277)
T ss_pred HHHHHhHHHHHHHHHHhCCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhHHHHh------------ch
Confidence 344566677889999999999999999999999999999999999999876543221110000 00
Q ss_pred hccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCC
Q 020064 174 RDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPS 253 (331)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (331)
+. ...+..+..+-+... .......+.|..|....... ..+..
T Consensus 163 Rd------v~kWs~r~R~P~e~~--Yg~e~f~~~wa~wvD~v~qf-----------------------------~~~~d- 204 (277)
T KOG2984|consen 163 RD------VNKWSARGRQPYEDH--YGPETFRTQWAAWVDVVDQF-----------------------------HSFCD- 204 (277)
T ss_pred HH------HhhhhhhhcchHHHh--cCHHHHHHHHHHHHHHHHHH-----------------------------hhcCC-
Confidence 00 000000000000000 00001111222221111110 01111
Q ss_pred cchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhh
Q 020064 254 DSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNLI 327 (331)
Q Consensus 254 ~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 327 (331)
..-..-.+.++ +||+||++|++|++++...+-.+..+.+.+++.++|.++|.+++.- ++++.+.+.+|+++.
T Consensus 205 G~fCr~~lp~v-kcPtli~hG~kDp~~~~~hv~fi~~~~~~a~~~~~peGkHn~hLry-a~eFnklv~dFl~~~ 276 (277)
T KOG2984|consen 205 GRFCRLVLPQV-KCPTLIMHGGKDPFCGDPHVCFIPVLKSLAKVEIHPEGKHNFHLRY-AKEFNKLVLDFLKST 276 (277)
T ss_pred CchHhhhcccc-cCCeeEeeCCcCCCCCCCCccchhhhcccceEEEccCCCcceeeec-hHHHHHHHHHHHhcc
Confidence 11133478899 5999999999999999999998999899999999999999999995 999999999999863
|
|
| >PRK06765 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.5e-26 Score=184.38 Aligned_cols=279 Identities=12% Similarity=0.012 Sum_probs=162.0
Q ss_pred ceEEEEeCCCCC---CCcEEEeccCCCCC-------------CCCC-c---ccccCCCCcEEEEecCCCCCCCCCC----
Q 020064 33 HTIYWEQSGNPT---GHPVVFLHGGPGGG-------------TTPS-N---RRFFDPDFYRIILFDQRGAGKSTPH---- 88 (331)
Q Consensus 33 ~~l~~~~~g~~~---~~~vl~~HG~~~~~-------------~~~~-~---~~~~~~~g~~vi~~D~~G~G~s~~~---- 88 (331)
.+|.|.++|..+ .++||++|++.++. .||. + -..+....|.||++|..|-|.|..+
T Consensus 41 ~~~~Y~t~G~ln~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~g~ 120 (389)
T PRK06765 41 VQMGYETYGTLNRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNVIT 120 (389)
T ss_pred ceEEEEeccccCCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCCCC
Confidence 378999999643 47899999976642 2333 2 1224457899999999987653211
Q ss_pred -------C--------CCCccchHHHHHHHHHHHHHhCCCcEE-EEEeChhHHHHHHHHHhCCCceeeEEEeccccchhh
Q 020064 89 -------A--------CLDQNTTWDLIDDIEKLRQHLEIPEWQ-VFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKK 152 (331)
Q Consensus 89 -------~--------~~~~~~~~~~~~~~~~~~~~~~~~~v~-lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~ 152 (331)
+ ....++++++++++..+++++++++++ ++||||||++++.+|.++|++++++|++++......
T Consensus 121 tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~~~~~~ 200 (389)
T PRK06765 121 TGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGNPQNDA 200 (389)
T ss_pred CCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEecCCCCCh
Confidence 1 123479999999999999999999987 999999999999999999999999999987655322
Q ss_pred hh-hhHhhcc-cccCChhhHHhh--hccCCcchhhhhHHhhccccCCCchHHHH-------------------HHHHHhh
Q 020064 153 EI-DWFYEGG-AAAIYPDAWESF--RDLIPENERSCFVDAYSKRLNSDDKETQY-------------------AAARAWT 209 (331)
Q Consensus 153 ~~-~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~ 209 (331)
.. ..+.... ........|..- ....+........................ .....|.
T Consensus 201 ~~~~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~~~~~~~~~~~~~~~e~yl 280 (389)
T PRK06765 201 WTSVNVLQNWAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASIEVDPYEKVSTLTSFEKEI 280 (389)
T ss_pred hHHHHHHHHHHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCccccccccccccchhhHHHHH
Confidence 21 0000000 000000000000 00000000000000000000000000000 0000000
Q ss_pred hHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCCCccCCcchHHHH
Q 020064 210 KWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLH 289 (331)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~ 289 (331)
.... .......+...+......+...- ......++.+.+.++ ++|+|+|+|++|.++|++.++.+.
T Consensus 281 ~~~~--------~~~~~~~Dan~~l~l~~a~~~~d-----~g~~~~dl~~~L~~I-~~PtLvI~G~~D~l~p~~~~~~la 346 (389)
T PRK06765 281 NKAT--------YRRAELVDANHWLYLAKAVQLFD-----AGHGFSSLEEALSNI-EANVLMIPCKQDLLQPPRYNYKMV 346 (389)
T ss_pred HHHH--------HHhhhccChhhHHHHHHHHHhcC-----CccccCCHHHHHhcC-CCCEEEEEeCCCCCCCHHHHHHHH
Confidence 0000 00011111111111111111000 000012567788999 599999999999999999999999
Q ss_pred HhCC----CCcEEEecC-CCCCCCcCCchhHHHHHHHHHHHh
Q 020064 290 KAWP----EADFKVVAD-AGHSANEPGIAAELVATNEKLKNL 326 (331)
Q Consensus 290 ~~~~----~~~~~~~~~-~gH~~~~~~~~~~~~~~i~~fl~~ 326 (331)
+.++ +++++++++ +||..+.++ ++++.+.|.+|+++
T Consensus 347 ~~lp~~~~~a~l~~I~s~~GH~~~le~-p~~~~~~I~~FL~~ 387 (389)
T PRK06765 347 DILQKQGKYAEVYEIESINGHMAGVFD-IHLFEKKIYEFLNR 387 (389)
T ss_pred HHhhhcCCCeEEEEECCCCCcchhhcC-HHHHHHHHHHHHcc
Confidence 9886 689999985 899999997 99999999999975
|
|
| >TIGR01607 PST-A Plasmodium subtelomeric family (PST-A) | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.3e-27 Score=190.12 Aligned_cols=264 Identities=14% Similarity=0.075 Sum_probs=153.8
Q ss_pred eEeCCCceEEEEeCCCC-CCCcEEEeccCCCCCCC---------------------------CCcccccCCCCcEEEEec
Q 020064 27 LKVSDIHTIYWEQSGNP-TGHPVVFLHGGPGGGTT---------------------------PSNRRFFDPDFYRIILFD 78 (331)
Q Consensus 27 ~~~~~g~~l~~~~~g~~-~~~~vl~~HG~~~~~~~---------------------------~~~~~~~~~~g~~vi~~D 78 (331)
+...+|.+|++..+.++ .+.+|+++||.+....+ ..++..+.++||+|+++|
T Consensus 2 ~~~~~g~~l~~~~~~~~~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~D 81 (332)
T TIGR01607 2 FRNKDGLLLKTYSWIVKNAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGLD 81 (332)
T ss_pred ccCCCCCeEEEeeeeccCCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEec
Confidence 45568888988877542 23479999996655432 124667778999999999
Q ss_pred CCCCCCCCCCCCC--CccchHHHHHHHHHHHHHhC------------------------CCcEEEEEeChhHHHHHHHHH
Q 020064 79 QRGAGKSTPHACL--DQNTTWDLIDDIEKLRQHLE------------------------IPEWQVFGGSWGSTLALAYSL 132 (331)
Q Consensus 79 ~~G~G~s~~~~~~--~~~~~~~~~~~~~~~~~~~~------------------------~~~v~lvG~S~Gg~~a~~~a~ 132 (331)
+||||.|...... .-.+++++++|+..+++.+. ..+++++||||||.+++.++.
T Consensus 82 ~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~ 161 (332)
T TIGR01607 82 LQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLE 161 (332)
T ss_pred ccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHH
Confidence 9999999854211 12478899999998887642 247999999999999999987
Q ss_pred hCCC--------ceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhccccCCCchHHHHHH
Q 020064 133 AHPD--------KVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAA 204 (331)
Q Consensus 133 ~~p~--------~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (331)
.+++ .++|+|+++|......... ......+...... ...+..+...+......
T Consensus 162 ~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~-----~~~~~~~~~~~~l---------~~~~~~~~p~~~~~~~~----- 222 (332)
T TIGR01607 162 LLGKSNENNDKLNIKGCISLSGMISIKSVGS-----DDSFKFKYFYLPV---------MNFMSRVFPTFRISKKI----- 222 (332)
T ss_pred HhccccccccccccceEEEeccceEEecccC-----CCcchhhhhHHHH---------HHHHHHHCCcccccCcc-----
Confidence 6542 5899998888653210000 0000000000000 00001111111000000
Q ss_pred HHHhhhH-HHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccc-cccEEEEecCCCCccCC
Q 020064 205 ARAWTKW-EMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIR-HINATIVQGRYDVCCPM 282 (331)
Q Consensus 205 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~-~~P~l~i~G~~D~~~~~ 282 (331)
+..+ .........++..........+...+... .......+.+++ ++|+|+++|++|.++++
T Consensus 223 ---~~~~~~~~~~~~~~Dp~~~~~~~s~~~~~~l~~~-------------~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~ 286 (332)
T TIGR01607 223 ---RYEKSPYVNDIIKFDKFRYDGGITFNLASELIKA-------------TDTLDCDIDYIPKDIPILFIHSKGDCVCSY 286 (332)
T ss_pred ---ccccChhhhhHHhcCccccCCcccHHHHHHHHHH-------------HHHHHhhHhhCCCCCCEEEEEeCCCCccCH
Confidence 0000 00000000011000000000000000000 011122333441 48999999999999999
Q ss_pred cchHHHHHhC--CCCcEEEecCCCCCCCcCCchhHHHHHHHHHHH
Q 020064 283 MSAWDLHKAW--PEADFKVVADAGHSANEPGIAAELVATNEKLKN 325 (331)
Q Consensus 283 ~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~ 325 (331)
+.++.+.+.. ++++++++++++|.++.|...+++.+.|.+||+
T Consensus 287 ~~~~~~~~~~~~~~~~l~~~~g~~H~i~~E~~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 287 EGTVSFYNKLSISNKELHTLEDMDHVITIEPGNEEVLKKIIEWIS 331 (332)
T ss_pred HHHHHHHHhccCCCcEEEEECCCCCCCccCCCHHHHHHHHHHHhh
Confidence 9999888765 578999999999999988668999999999985
|
These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii. |
| >PRK13604 luxD acyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.3e-26 Score=177.05 Aligned_cols=239 Identities=10% Similarity=0.083 Sum_probs=149.0
Q ss_pred ccceeEeCCCceEEEEeCCCC-----CCCcEEEeccCCCCCC-CCCcccccCCCCcEEEEecCCCC-CCCCCCCCCCccc
Q 020064 23 STGILKVSDIHTIYWEQSGNP-----TGHPVVFLHGGPGGGT-TPSNRRFFDPDFYRIILFDQRGA-GKSTPHACLDQNT 95 (331)
Q Consensus 23 ~~~~~~~~~g~~l~~~~~g~~-----~~~~vl~~HG~~~~~~-~~~~~~~~~~~g~~vi~~D~~G~-G~s~~~~~~~~~~ 95 (331)
..+.+.+.+|.+|+-+...+. ..++||++||+++... +..++..+.++||.|+.+|+||+ |.|++... ..+
T Consensus 10 ~~~~~~~~dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~--~~t 87 (307)
T PRK13604 10 IDHVICLENGQSIRVWETLPKENSPKKNNTILIASGFARRMDHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTID--EFT 87 (307)
T ss_pred hhheEEcCCCCEEEEEEEcCcccCCCCCCEEEEeCCCCCChHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCccc--cCc
Confidence 467889999999987655442 2367999999877643 56677888889999999999987 99975432 233
Q ss_pred hHHHHHHHHHHHHHh---CCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHh
Q 020064 96 TWDLIDDIEKLRQHL---EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWES 172 (331)
Q Consensus 96 ~~~~~~~~~~~~~~~---~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (331)
......|+..+++.+ +.+++.|+||||||.+++..|... .++++|+.+|...............
T Consensus 88 ~s~g~~Dl~aaid~lk~~~~~~I~LiG~SmGgava~~~A~~~--~v~~lI~~sp~~~l~d~l~~~~~~~----------- 154 (307)
T PRK13604 88 MSIGKNSLLTVVDWLNTRGINNLGLIAASLSARIAYEVINEI--DLSFLITAVGVVNLRDTLERALGYD----------- 154 (307)
T ss_pred ccccHHHHHHHHHHHHhcCCCceEEEEECHHHHHHHHHhcCC--CCCEEEEcCCcccHHHHHHHhhhcc-----------
Confidence 333456665555554 456899999999999997777643 4999999998776432111000000
Q ss_pred hhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCC
Q 020064 173 FRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFP 252 (331)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (331)
+ ..++..... ..+.... .. .. ...+..... ...+..
T Consensus 155 ~-~~~p~~~lp-------~~~d~~g----~~----------------l~--------~~~f~~~~~--------~~~~~~ 190 (307)
T PRK13604 155 Y-LSLPIDELP-------EDLDFEG----HN----------------LG--------SEVFVTDCF--------KHGWDT 190 (307)
T ss_pred c-ccCcccccc-------ccccccc----cc----------------cc--------HHHHHHHHH--------hcCccc
Confidence 0 000000000 0000000 00 00 000000000 000000
Q ss_pred CcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCC--CCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhhh
Q 020064 253 SDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWP--EADFKVVADAGHSANEPGIAAELVATNEKLKNLIK 328 (331)
Q Consensus 253 ~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~ 328 (331)
.....+.+.++ ++|+|+|||++|.+||++.++.+.+.++ +++++++||++|.+... .-.+++|.+.+.
T Consensus 191 -~~s~i~~~~~l-~~PvLiIHG~~D~lVp~~~s~~l~e~~~s~~kkl~~i~Ga~H~l~~~------~~~~~~~~~~~~ 260 (307)
T PRK13604 191 -LDSTINKMKGL-DIPFIAFTANNDSWVKQSEVIDLLDSIRSEQCKLYSLIGSSHDLGEN------LVVLRNFYQSVT 260 (307)
T ss_pred -cccHHHHHhhc-CCCEEEEEcCCCCccCHHHHHHHHHHhccCCcEEEEeCCCccccCcc------hHHHHHHHHHHH
Confidence 12233456778 5999999999999999999999999884 79999999999998654 345677777654
|
|
| >PRK10985 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.1e-26 Score=183.95 Aligned_cols=277 Identities=12% Similarity=0.031 Sum_probs=154.1
Q ss_pred CCccceeEeCCCceEEEEeC--C--CCCCCcEEEeccCCCCCCC---CCcccccCCCCcEEEEecCCCCCCCCCCC--CC
Q 020064 21 PYSTGILKVSDIHTIYWEQS--G--NPTGHPVVFLHGGPGGGTT---PSNRRFFDPDFYRIILFDQRGAGKSTPHA--CL 91 (331)
Q Consensus 21 ~~~~~~~~~~~g~~l~~~~~--g--~~~~~~vl~~HG~~~~~~~---~~~~~~~~~~g~~vi~~D~~G~G~s~~~~--~~ 91 (331)
......+++.||..+.+... + ++++|+||++||++++... ..++..+.++||+|+++|+||||.+.... ..
T Consensus 30 ~~~~~~~~~~dg~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~~~ 109 (324)
T PRK10985 30 TPYWQRLELPDGDFVDLAWSEDPAQARHKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHRIY 109 (324)
T ss_pred CcceeEEECCCCCEEEEecCCCCccCCCCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcceE
Confidence 44556788899866654322 1 1246789999998665332 23556677899999999999999875321 11
Q ss_pred CccchHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCc--eeeEEEeccccchhhhhhhHhhcccccCChhh
Q 020064 92 DQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDK--VTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDA 169 (331)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~--v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (331)
.....+|+...+..+.+.++..+++++||||||.+++.++..+++. +.++|+++++.........+.. ... ..
T Consensus 110 ~~~~~~D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~~~~~~-~~~----~~ 184 (324)
T PRK10985 110 HSGETEDARFFLRWLQREFGHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACSYRMEQ-GFS----RV 184 (324)
T ss_pred CCCchHHHHHHHHHHHHhCCCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHHHHHhh-hHH----HH
Confidence 1112344444445555566777999999999999988888877544 8899999887653321111100 000 00
Q ss_pred HHhhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCC-ccHHHHHHhhhhhhhhhcc
Q 020064 170 WESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGE-DDIFSLAFARIENHYFLNK 248 (331)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 248 (331)
+.... ....... .......+... ...+.+.+.... ...+-..+......+....
T Consensus 185 ~~~~l---~~~l~~~-~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~fd~~~~~~~~g~~~~~ 239 (324)
T PRK10985 185 YQRYL---LNLLKAN-AARKLAAYPGT---------------------LPINLAQLKSVRRLREFDDLITARIHGFADAI 239 (324)
T ss_pred HHHHH---HHHHHHH-HHHHHHhcccc---------------------ccCCHHHHhcCCcHHHHhhhheeccCCCCCHH
Confidence 00000 0000000 00000000000 000010000000 0000000000000000000
Q ss_pred CCCCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCc----hhHHHHHHHHHH
Q 020064 249 GFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGI----AAELVATNEKLK 324 (331)
Q Consensus 249 ~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~----~~~~~~~i~~fl 324 (331)
.++. ..+..+.+.++ ++|+++|+|++|++++++....+.+..+++++++++++||+.+.+.. ....-+.+.+|+
T Consensus 240 ~~y~-~~~~~~~l~~i-~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~ 317 (324)
T PRK10985 240 DYYR-QCSALPLLNQI-RKPTLIIHAKDDPFMTHEVIPKPESLPPNVEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWL 317 (324)
T ss_pred HHHH-HCChHHHHhCC-CCCEEEEecCCCCCCChhhChHHHHhCCCeEEEECCCCCceeeCCCCCCCCCccHHHHHHHHH
Confidence 0000 12234677889 59999999999999998888888777889999999999999887641 245677788888
Q ss_pred Hhhhc
Q 020064 325 NLIKN 329 (331)
Q Consensus 325 ~~~~~ 329 (331)
+...+
T Consensus 318 ~~~~~ 322 (324)
T PRK10985 318 TTYLE 322 (324)
T ss_pred HHhhc
Confidence 76543
|
|
| >PRK05077 frsA fermentation/respiration switch protein; Reviewed | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.8e-25 Score=183.06 Aligned_cols=238 Identities=11% Similarity=0.051 Sum_probs=143.7
Q ss_pred CCccceeEeCCCceEEEEeC---CCCCCCcEEEeccCCCC--CCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccc
Q 020064 21 PYSTGILKVSDIHTIYWEQS---GNPTGHPVVFLHGGPGG--GTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNT 95 (331)
Q Consensus 21 ~~~~~~~~~~~g~~l~~~~~---g~~~~~~vl~~HG~~~~--~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~ 95 (331)
+.+...+...+|.++...-. +....|+||++||+.+. ..+......+.+.||+|+++|+||+|.|.... ...+
T Consensus 167 ~~e~v~i~~~~g~~l~g~l~~P~~~~~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~--~~~d 244 (414)
T PRK05077 167 ELKELEFPIPGGGPITGFLHLPKGDGPFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWK--LTQD 244 (414)
T ss_pred ceEEEEEEcCCCcEEEEEEEECCCCCCccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCC--cccc
Confidence 45566667777756653322 22233455554444432 23444566777899999999999999997532 1223
Q ss_pred hHHHHHHHHHHHHHh---CCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHh
Q 020064 96 TWDLIDDIEKLRQHL---EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWES 172 (331)
Q Consensus 96 ~~~~~~~~~~~~~~~---~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (331)
......++.+.+... +.+++.++|||+||.+++.+|..+|++++++|+++++....... ...+
T Consensus 245 ~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~~------------~~~~-- 310 (414)
T PRK05077 245 SSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLTD------------PKRQ-- 310 (414)
T ss_pred HHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccchhhcc------------hhhh--
Confidence 344445555555444 55789999999999999999999999999999998865311000 0000
Q ss_pred hhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCC
Q 020064 173 FRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFP 252 (331)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (331)
..++.. ....+...+... ..+.+ .+...+... .. .
T Consensus 311 --~~~p~~----~~~~la~~lg~~----------------------~~~~~--------~l~~~l~~~--------sl-~ 345 (414)
T PRK05077 311 --QQVPEM----YLDVLASRLGMH----------------------DASDE--------ALRVELNRY--------SL-K 345 (414)
T ss_pred --hhchHH----HHHHHHHHhCCC----------------------CCChH--------HHHHHhhhc--------cc-h
Confidence 000000 000000000000 00000 000000000 00 0
Q ss_pred CcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhh
Q 020064 253 SDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNLI 327 (331)
Q Consensus 253 ~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 327 (331)
.... ...++ ++|+|+|+|++|+++|++.++.+.+..++.+++++|++ ++.+. ++++++.+.+||++.
T Consensus 346 -~~~~--l~~~i-~~PvLiI~G~~D~ivP~~~a~~l~~~~~~~~l~~i~~~---~~~e~-~~~~~~~i~~wL~~~ 412 (414)
T PRK05077 346 -VQGL--LGRRC-PTPMLSGYWKNDPFSPEEDSRLIASSSADGKLLEIPFK---PVYRN-FDKALQEISDWLEDR 412 (414)
T ss_pred -hhhh--hccCC-CCcEEEEecCCCCCCCHHHHHHHHHhCCCCeEEEccCC---CccCC-HHHHHHHHHHHHHHH
Confidence 0000 11467 59999999999999999999999998999999999986 34454 999999999999764
|
|
| >PLN02872 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1e-25 Score=183.11 Aligned_cols=306 Identities=10% Similarity=-0.017 Sum_probs=166.2
Q ss_pred CCCCCccceeEeCCCceEEEEeCCC-------CCCCcEEEeccCCCCCCCCC-------cccccCCCCcEEEEecCCCCC
Q 020064 18 YVEPYSTGILKVSDIHTIYWEQSGN-------PTGHPVVFLHGGPGGGTTPS-------NRRFFDPDFYRIILFDQRGAG 83 (331)
Q Consensus 18 ~~~~~~~~~~~~~~g~~l~~~~~g~-------~~~~~vl~~HG~~~~~~~~~-------~~~~~~~~g~~vi~~D~~G~G 83 (331)
...+.+++.+++.||..|......+ .++|+|+++||+..++..|. +...++++||+|+++|+||++
T Consensus 40 ~gy~~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~ 119 (395)
T PLN02872 40 AGYSCTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTR 119 (395)
T ss_pred cCCCceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHhCCCCcccccccccc
Confidence 3578899999999999888766421 23678999999765544432 122355689999999999987
Q ss_pred CCCC-------CCCCCccchHHHH-HHHHHHHHHh---CCCcEEEEEeChhHHHHHHHHHhCCC---ceeeEEEeccccc
Q 020064 84 KSTP-------HACLDQNTTWDLI-DDIEKLRQHL---EIPEWQVFGGSWGSTLALAYSLAHPD---KVTGLVLRGIFLL 149 (331)
Q Consensus 84 ~s~~-------~~~~~~~~~~~~~-~~~~~~~~~~---~~~~v~lvG~S~Gg~~a~~~a~~~p~---~v~~li~~~~~~~ 149 (331)
.|.. ......+++++++ .|+.++++.+ ..++++++||||||.+++.++ .+|+ +|+.+++++|...
T Consensus 120 ~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~~~ 198 (395)
T PLN02872 120 WSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITNSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCPISY 198 (395)
T ss_pred cccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhccCCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcchhh
Confidence 6532 1111246788888 7999998886 347999999999999998555 5776 6888888888765
Q ss_pred hhhhhhhHhhcccccCChhhHHhhh---ccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHH------hhhcCCC
Q 020064 150 RKKEIDWFYEGGAAAIYPDAWESFR---DLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEM------MTAHLLP 220 (331)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 220 (331)
.......+..... ......+.... ...+. ...+..+...+.... ..-......+..+.. .......
T Consensus 199 ~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~---~~~~~~~~~~~C~~~-~~c~~~~~~~~g~~~~~n~~~~~~~~~~ 273 (395)
T PLN02872 199 LDHVTAPLVLRMV-FMHLDQMVVAMGIHQLNFR---SDVLVKLLDSICEGH-MDCNDLLTSITGTNCCFNASRIDYYLEY 273 (395)
T ss_pred hccCCCHHHHHHH-HHhHHHHHHHhcCceecCC---cHHHHHHHHHHccCc-hhHHHHHHHHhCCCcccchhhhhHHHhc
Confidence 3211111100000 00000000000 00000 001111111111000 000000000000000 0000000
Q ss_pred ChhhhhcCCccHHHHHHhhhhhhhhh-----ccCCCCCcchhhhhccccc-cccEEEEecCCCCccCCcchHHHHHhCCC
Q 020064 221 NEENIKRGEDDIFSLAFARIENHYFL-----NKGFFPSDSFLLDNIDNIR-HINATIVQGRYDVCCPMMSAWDLHKAWPE 294 (331)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~i~-~~P~l~i~G~~D~~~~~~~~~~~~~~~~~ 294 (331)
.|..........+.+.........|. +...+.......-.+.+++ ++|+++++|++|.+++++.++.+.+.+++
T Consensus 274 ~pagtS~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~ 353 (395)
T PLN02872 274 EPHPSSVKNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVTDVEHTLAELPS 353 (395)
T ss_pred CCCcchHHHHHHHHHHHhcCCcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCHHHHHHHHHHCCC
Confidence 00000000001112221111111110 0000110111122566662 37999999999999999999999999987
Q ss_pred -CcEEEecCCCCC--CCcCCchhHHHHHHHHHHHhhhc
Q 020064 295 -ADFKVVADAGHS--ANEPGIAAELVATNEKLKNLIKN 329 (331)
Q Consensus 295 -~~~~~~~~~gH~--~~~~~~~~~~~~~i~~fl~~~~~ 329 (331)
.+++.++++||. ++.++.++++.+.|.+|+++..+
T Consensus 354 ~~~l~~l~~~gH~dfi~~~eape~V~~~Il~fL~~~~~ 391 (395)
T PLN02872 354 KPELLYLENYGHIDFLLSTSAKEDVYNHMIQFFRSLGK 391 (395)
T ss_pred ccEEEEcCCCCCHHHHhCcchHHHHHHHHHHHHHHhhh
Confidence 688899999996 33333499999999999987654
|
|
| >KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1e-24 Score=165.89 Aligned_cols=253 Identities=15% Similarity=0.133 Sum_probs=154.6
Q ss_pred CCCCcEEEeccCCCCCC-CCCcccccCC-CCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhC----CCcEE
Q 020064 43 PTGHPVVFLHGGPGGGT-TPSNRRFFDP-DFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLE----IPEWQ 116 (331)
Q Consensus 43 ~~~~~vl~~HG~~~~~~-~~~~~~~~~~-~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~ 116 (331)
...|+++++||..++.. |..+...+.. -+-.|+++|.|.||.|.... ..+...+++|+..+++..+ ..+++
T Consensus 50 ~~~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~---~h~~~~ma~dv~~Fi~~v~~~~~~~~~~ 126 (315)
T KOG2382|consen 50 ERAPPAIILHGLLGSKENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKIT---VHNYEAMAEDVKLFIDGVGGSTRLDPVV 126 (315)
T ss_pred CCCCceEEecccccCCCCHHHHHHHhcccccCceEEEecccCCCCcccc---ccCHHHHHHHHHHHHHHcccccccCCce
Confidence 46799999999666644 4444444433 46799999999999998765 5679999999999999985 56899
Q ss_pred EEEeChhH-HHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCC----cchhhhhHHhhcc
Q 020064 117 VFGGSWGS-TLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIP----ENERSCFVDAYSK 191 (331)
Q Consensus 117 lvG~S~Gg-~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 191 (331)
++|||||| .+++..+...|+.+..+|+++..+...... .......+..+...-. ...+......+..
T Consensus 127 l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~--------~~e~~e~i~~m~~~d~~~~~~~~rke~~~~l~~ 198 (315)
T KOG2382|consen 127 LLGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRS--------YGEYRELIKAMIQLDLSIGVSRGRKEALKSLIE 198 (315)
T ss_pred ecccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcc--------cchHHHHHHHHHhccccccccccHHHHHHHHHH
Confidence 99999999 888888888999999999998655211000 0000001111100000 0111111111111
Q ss_pred ccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEE
Q 020064 192 RLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATI 271 (331)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~ 271 (331)
.... .....|...... ....+....-..........+.... ......++ .. ... ..|||+
T Consensus 199 ~~~d-------~~~~~fi~~nl~--~~~~~~s~~w~~nl~~i~~~~~~~~--------~~s~~~~l-~~-~~~-~~pvlf 258 (315)
T KOG2382|consen 199 VGFD-------NLVRQFILTNLK--KSPSDGSFLWRVNLDSIASLLDEYE--------ILSYWADL-ED-GPY-TGPVLF 258 (315)
T ss_pred Hhcc-------hHHHHHHHHhcC--cCCCCCceEEEeCHHHHHHHHHHHH--------hhcccccc-cc-ccc-ccceeE
Confidence 0000 000011100000 0001111111112222222222211 00001111 12 344 599999
Q ss_pred EecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhh
Q 020064 272 VQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNLI 327 (331)
Q Consensus 272 i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 327 (331)
+.|.++..++.+.-.++.+.+|++++++++++||+++.|+ |+++++.|.+|+.+.
T Consensus 259 i~g~~S~fv~~~~~~~~~~~fp~~e~~~ld~aGHwVh~E~-P~~~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 259 IKGLQSKFVPDEHYPRMEKIFPNVEVHELDEAGHWVHLEK-PEEFIESISEFLEEP 313 (315)
T ss_pred EecCCCCCcChhHHHHHHHhccchheeecccCCceeecCC-HHHHHHHHHHHhccc
Confidence 9999999999998999999999999999999999999998 999999999999764
|
|
| >TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.93 E-value=1e-24 Score=171.49 Aligned_cols=231 Identities=14% Similarity=0.092 Sum_probs=137.3
Q ss_pred CCCcEEEeccCCCCC--C---CCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHh-----CCC
Q 020064 44 TGHPVVFLHGGPGGG--T---TPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHL-----EIP 113 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~--~---~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 113 (331)
++++||++||+.+.. . +..++..+.++||+|+++|+||||.|.... .+++++.+|+.++++.+ +.+
T Consensus 25 ~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~----~~~~~~~~d~~~~~~~l~~~~~g~~ 100 (274)
T TIGR03100 25 HTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGEN----LGFEGIDADIAAAIDAFREAAPHLR 100 (274)
T ss_pred CCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC----CCHHHHHHHHHHHHHHHHhhCCCCC
Confidence 456788888865432 1 223456676789999999999999987532 35667777887777766 567
Q ss_pred cEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHh-hhccCCcchhhhhHHhhccc
Q 020064 114 EWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWES-FRDLIPENERSCFVDAYSKR 192 (331)
Q Consensus 114 ~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 192 (331)
+++++||||||.+++.+|.. +++++++|+++|........ ....... +...... ..++..+...
T Consensus 101 ~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~~~~~~-----------~~~~~~~~~~~~~~~---~~~~~~~~~g 165 (274)
T TIGR03100 101 RIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVRTEAAQ-----------AASRIRHYYLGQLLS---ADFWRKLLSG 165 (274)
T ss_pred cEEEEEECHHHHHHHHHhhh-CCCccEEEEECCccCCcccc-----------hHHHHHHHHHHHHhC---hHHHHHhcCC
Confidence 89999999999999999765 46899999999864321100 0000000 0000000 0010100000
Q ss_pred cCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEE
Q 020064 193 LNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIV 272 (331)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i 272 (331)
.... ......... ............. ......++...+.++ ++|+|++
T Consensus 166 ---~~~~--~~~~~~~~~--~~~~~~~~~~~~~------------------------~~~~~~~~~~~l~~~-~~P~ll~ 213 (274)
T TIGR03100 166 ---EVNL--GSSLRGLGD--ALLKARQKGDEVA------------------------HGGLAERMKAGLERF-QGPVLFI 213 (274)
T ss_pred ---CccH--HHHHHHHHH--HHHhhhhcCCCcc------------------------cchHHHHHHHHHHhc-CCcEEEE
Confidence 0000 000000000 0000000000000 000033455677788 6999999
Q ss_pred ecCCCCccCCcch------HHHHHhC--CCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHh
Q 020064 273 QGRYDVCCPMMSA------WDLHKAW--PEADFKVVADAGHSANEPGIAAELVATNEKLKNL 326 (331)
Q Consensus 273 ~G~~D~~~~~~~~------~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 326 (331)
+|++|...+ ... ..+.+.+ ++++++.+++++|++..+..++++.+.|.+||++
T Consensus 214 ~g~~D~~~~-~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~~ 274 (274)
T TIGR03100 214 LSGNDLTAQ-EFADSVLGEPAWRGALEDPGIERVEIDGADHTFSDRVWREWVAARTTEWLRR 274 (274)
T ss_pred EcCcchhHH-HHHHHhccChhhHHHhhcCCeEEEecCCCCcccccHHHHHHHHHHHHHHHhC
Confidence 999999864 222 4555545 7899999999999997776689999999999964
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily. |
| >PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.5e-25 Score=169.76 Aligned_cols=226 Identities=25% Similarity=0.239 Sum_probs=134.0
Q ss_pred cEEEEecCCCCCCCCC--CCCCCccchHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccc
Q 020064 72 YRIILFDQRGAGKSTP--HACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLL 149 (331)
Q Consensus 72 ~~vi~~D~~G~G~s~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~ 149 (331)
|+|+++|+||+|.|++ ......++.+++++++..+++.++.++++++||||||.+++.+|+.+|++|+++|+++++..
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~~~ 80 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPERVKKLVLISPPPD 80 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESSH
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCchhhcCcEEEeeecc
Confidence 7899999999999995 24456789999999999999999999999999999999999999999999999999998631
Q ss_pred hhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCC
Q 020064 150 RKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGE 229 (331)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (331)
......+..... ............................. ......... ........ ........
T Consensus 81 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~-~~~~~~~~--~~~~~~~~ 146 (230)
T PF00561_consen 81 LPDGLWNRIWPR--GNLQGQLLDNFFNFLSDPIKPLLGRWPKQ---------FFAYDREFV-EDFLKQFQ--SQQYARFA 146 (230)
T ss_dssp HHHHHHHHCHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHH-HTHHHHHH--HHHHHHTC
T ss_pred chhhhhHHHHhh--hhhhhhHHHhhhccccccchhhhhhhhhh---------eeeccCccc-cchhhccc--hhhhhHHH
Confidence 000000000000 00000000000000000000000000000 000000000 00000000 00000000
Q ss_pred -ccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCC
Q 020064 230 -DDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSAN 308 (331)
Q Consensus 230 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 308 (331)
.......+... .... ...+....+.++ ++|+|+++|++|.++|++....+.+.+|+.++++++++||+.+
T Consensus 147 ~~~~~~~~~~~~-------~~~~-~~~~~~~~l~~i-~~p~l~i~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~GH~~~ 217 (230)
T PF00561_consen 147 ETDAFDNMFWNA-------LGYF-SVWDPSPALSNI-KVPTLIIWGEDDPLVPPESSEQLAKLIPNSQLVLIEGSGHFAF 217 (230)
T ss_dssp HHHHHHHHHHHH-------HHHH-HHHHHHHHHTTT-TSEEEEEEETTCSSSHHHHHHHHHHHSTTEEEEEETTCCSTHH
T ss_pred HHHHHhhhcccc-------cccc-cccccccccccc-CCCeEEEEeCCCCCCCHHHHHHHHHhcCCCEEEECCCCChHHH
Confidence 00000000000 0000 034455678889 6999999999999999999999999999999999999999999
Q ss_pred cCCchhHHHHHHH
Q 020064 309 EPGIAAELVATNE 321 (331)
Q Consensus 309 ~~~~~~~~~~~i~ 321 (331)
.++ ++++.+.|.
T Consensus 218 ~~~-~~~~~~~i~ 229 (230)
T PF00561_consen 218 LEG-PDEFNEIII 229 (230)
T ss_dssp HHS-HHHHHHHHH
T ss_pred hcC-HHhhhhhhc
Confidence 997 888888775
|
; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A .... |
| >TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.6e-23 Score=169.69 Aligned_cols=102 Identities=18% Similarity=0.112 Sum_probs=79.9
Q ss_pred CCCcEEEeccCCCCCCC------CCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHH-----HHHHHHHHHhCC
Q 020064 44 TGHPVVFLHGGPGGGTT------PSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLI-----DDIEKLRQHLEI 112 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~~------~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 112 (331)
.++|||++||...+... ..++..+.++||+|+++|++|+|.+.... ++++++ +.+..+++..+.
T Consensus 61 ~~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~~-----~~~d~~~~~~~~~v~~l~~~~~~ 135 (350)
T TIGR01836 61 HKTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRYL-----TLDDYINGYIDKCVDYICRTSKL 135 (350)
T ss_pred CCCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhcC-----CHHHHHHHHHHHHHHHHHHHhCC
Confidence 35689999996544333 35677777899999999999999876433 444443 345556666788
Q ss_pred CcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccch
Q 020064 113 PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLR 150 (331)
Q Consensus 113 ~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~ 150 (331)
++++++||||||.+++.+++.+|++++++|+++++...
T Consensus 136 ~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~ 173 (350)
T TIGR01836 136 DQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDF 173 (350)
T ss_pred CcccEEEECHHHHHHHHHHHhCchheeeEEEecccccc
Confidence 89999999999999999999999999999999987754
|
This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates. |
| >TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.2e-23 Score=171.91 Aligned_cols=260 Identities=11% Similarity=0.001 Sum_probs=145.8
Q ss_pred CCCcEEEeccCCCCCCCC------CcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCcEEE
Q 020064 44 TGHPVVFLHGGPGGGTTP------SNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQV 117 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~~~------~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l 117 (331)
.++|||++||+.+....+ .++..+.++||+|+++|++|+|.+.......+|..+.+.+++..+++.++.+++++
T Consensus 187 ~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~~ddY~~~~i~~al~~v~~~~g~~kv~l 266 (532)
T TIGR01838 187 HKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKTFDDYIRDGVIAALEVVEAITGEKQVNC 266 (532)
T ss_pred CCCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCChhhhHHHHHHHHHHHHHHhcCCCCeEE
Confidence 467899999987665544 36777888999999999999999876544445666678888888888899999999
Q ss_pred EEeChhHHHHH----HHHHhC-CCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhccc
Q 020064 118 FGGSWGSTLAL----AYSLAH-PDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKR 192 (331)
Q Consensus 118 vG~S~Gg~~a~----~~a~~~-p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (331)
+||||||.++. .+++.+ +++++++++++++........ +... .........+........ .....+...+..
T Consensus 267 vG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G~-l~~f-~~~~~~~~~e~~~~~~G~-lpg~~m~~~F~~ 343 (532)
T TIGR01838 267 VGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPGE-LGVF-VDEEIVAGIERQNGGGGY-LDGRQMAVTFSL 343 (532)
T ss_pred EEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcch-hhhh-cCchhHHHHHHHHHhcCC-CCHHHHHHHHHh
Confidence 99999999852 245555 789999999998765432100 0000 000000000000000000 000111111111
Q ss_pred cCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCC---cchhhhhccccccccE
Q 020064 193 LNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPS---DSFLLDNIDNIRHINA 269 (331)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~i~~~P~ 269 (331)
+...+...... ...+. ........+-........+.-...+...-...|....+... ..+....+.+| ++|+
T Consensus 344 lrp~~l~w~~~-v~~yl---~g~~~~~fdll~Wn~D~t~lP~~~~~~~lr~ly~~N~L~~G~~~v~g~~~dL~~I-~vPv 418 (532)
T TIGR01838 344 LRENDLIWNYY-VDNYL---KGKSPVPFDLLFWNSDSTNLPGKMHNFYLRNLYLQNALTTGGLEVCGVRLDLSKV-KVPV 418 (532)
T ss_pred cChhhHHHHHH-HHHHh---cCCCccchhHHHHhccCccchHHHHHHHHHHHHhcCCCcCCeeEECCEecchhhC-CCCE
Confidence 11110000000 00000 00000000000000001111111111121222222222221 23345688999 5999
Q ss_pred EEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCC
Q 020064 270 TIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPG 311 (331)
Q Consensus 270 l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 311 (331)
|+|+|++|.++|++.+..+.+.+++.+..+++++||..+.++
T Consensus 419 LvV~G~~D~IvP~~sa~~l~~~i~~~~~~vL~~sGHi~~ien 460 (532)
T TIGR01838 419 YIIATREDHIAPWQSAYRGAALLGGPKTFVLGESGHIAGVVN 460 (532)
T ss_pred EEEeeCCCCcCCHHHHHHHHHHCCCCEEEEECCCCCchHhhC
Confidence 999999999999999999999999999999999999987653
|
This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >PRK11071 esterase YqiA; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.1e-24 Score=156.79 Aligned_cols=183 Identities=12% Similarity=0.008 Sum_probs=121.3
Q ss_pred CcEEEeccCCCCCCCCC--cc-cccCC--CCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCcEEEEEe
Q 020064 46 HPVVFLHGGPGGGTTPS--NR-RFFDP--DFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGG 120 (331)
Q Consensus 46 ~~vl~~HG~~~~~~~~~--~~-~~~~~--~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG~ 120 (331)
|+||++||++++...+. .. ..+.+ .+|+|+++|+||+| +++++++.++++.++.++++++||
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~-------------~~~~~~l~~l~~~~~~~~~~lvG~ 68 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP-------------ADAAELLESLVLEHGGDPLGLVGS 68 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH-------------HHHHHHHHHHHHHcCCCCeEEEEE
Confidence 67999999887766543 22 33322 48999999999984 367889999999999999999999
Q ss_pred ChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhccccCCCchHH
Q 020064 121 SWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKET 200 (331)
Q Consensus 121 S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (331)
||||.+++.+|.++|. ++|+++|+..+......+. ... ........
T Consensus 69 S~Gg~~a~~~a~~~~~---~~vl~~~~~~~~~~~~~~~-------------------~~~---------~~~~~~~~--- 114 (190)
T PRK11071 69 SLGGYYATWLSQCFML---PAVVVNPAVRPFELLTDYL-------------------GEN---------ENPYTGQQ--- 114 (190)
T ss_pred CHHHHHHHHHHHHcCC---CEEEECCCCCHHHHHHHhc-------------------CCc---------ccccCCCc---
Confidence 9999999999999983 4688887654211110000 000 00000000
Q ss_pred HHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCCCcc
Q 020064 201 QYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCC 280 (331)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~ 280 (331)
...... +..... ..+.. .+. . .+|+++++|++|+++
T Consensus 115 -----------------~~~~~~---------~~~d~~---------------~~~~~-~i~-~-~~~v~iihg~~De~V 150 (190)
T PRK11071 115 -----------------YVLESR---------HIYDLK---------------VMQID-PLE-S-PDLIWLLQQTGDEVL 150 (190)
T ss_pred -----------------EEEcHH---------HHHHHH---------------hcCCc-cCC-C-hhhEEEEEeCCCCcC
Confidence 000000 000000 00111 122 4 589999999999999
Q ss_pred CCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHH
Q 020064 281 PMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKN 325 (331)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~ 325 (331)
|++.+.++.+. ++.++++|++|.+ .. .+++.+.+.+|++
T Consensus 151 ~~~~a~~~~~~---~~~~~~~ggdH~f--~~-~~~~~~~i~~fl~ 189 (190)
T PRK11071 151 DYRQAVAYYAA---CRQTVEEGGNHAF--VG-FERYFNQIVDFLG 189 (190)
T ss_pred CHHHHHHHHHh---cceEEECCCCcch--hh-HHHhHHHHHHHhc
Confidence 99999988884 5778889999998 32 5889999999975
|
|
| >PRK10566 esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.3e-23 Score=159.57 Aligned_cols=217 Identities=16% Similarity=0.102 Sum_probs=125.6
Q ss_pred CCceEEEEeCCC--CCCCcEEEeccCCCCCC-CCCcccccCCCCcEEEEecCCCCCCCCCCCCCCcc-----chHHHHHH
Q 020064 31 DIHTIYWEQSGN--PTGHPVVFLHGGPGGGT-TPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQN-----TTWDLIDD 102 (331)
Q Consensus 31 ~g~~l~~~~~g~--~~~~~vl~~HG~~~~~~-~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~-----~~~~~~~~ 102 (331)
+...++|...+. +..|+||++||++++.. +...+..+.++||+|+++|+||||.+......... ...+..+|
T Consensus 11 ~~~~~~~~p~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~ 90 (249)
T PRK10566 11 GIEVLHAFPAGQRDTPLPTVFFYHGFTSSKLVYSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQE 90 (249)
T ss_pred CcceEEEcCCCCCCCCCCEEEEeCCCCcccchHHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHH
Confidence 333455665542 34578999999876644 44466667778999999999999976422110010 01112333
Q ss_pred HHHHHHH------hCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhcc
Q 020064 103 IEKLRQH------LEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDL 176 (331)
Q Consensus 103 ~~~~~~~------~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (331)
+.++++. ++.++++++|||+||.+++.++.++|+...+++++++..... +..
T Consensus 91 ~~~~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~~~~------------------~~~---- 148 (249)
T PRK10566 91 FPTLRAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSGYFTS------------------LAR---- 148 (249)
T ss_pred HHHHHHHHHhcCCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcHHHHH------------------HHH----
Confidence 3333333 345689999999999999999999886444444444321100 000
Q ss_pred CCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcch
Q 020064 177 IPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSF 256 (331)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (331)
................ +...+.... ..+
T Consensus 149 -----------~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~------------~~~ 176 (249)
T PRK10566 149 -----------TLFPPLIPETAAQQAE-----------------------------FNNIVAPLA------------EWE 176 (249)
T ss_pred -----------HhcccccccccccHHH-----------------------------HHHHHHHHh------------hcC
Confidence 0000000000000000 000000000 111
Q ss_pred hhhhccccccccEEEEecCCCCccCCcchHHHHHhCCC------CcEEEecCCCCCCCcCCchhHHHHHHHHHHHh
Q 020064 257 LLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPE------ADFKVVADAGHSANEPGIAAELVATNEKLKNL 326 (331)
Q Consensus 257 ~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~------~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 326 (331)
....+.++.++|+|+++|++|.++|++.++.+.+.++. +++..++++||.+. ....+.+.+||++
T Consensus 177 ~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~H~~~-----~~~~~~~~~fl~~ 247 (249)
T PRK10566 177 VTHQLEQLADRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWEPGVRHRIT-----PEALDAGVAFFRQ 247 (249)
T ss_pred hhhhhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEecCCCCCccC-----HHHHHHHHHHHHh
Confidence 22334454148999999999999999999999887742 46778899999873 2357888888875
|
|
| >KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.1e-21 Score=144.07 Aligned_cols=215 Identities=17% Similarity=0.137 Sum_probs=144.5
Q ss_pred CCccceeEeCCCceEEEE-eCCCCC-CCcEEEeccCCCC-CCCCCcccccC-CCCcEEEEecCCCCCCCCCCCCCCccch
Q 020064 21 PYSTGILKVSDIHTIYWE-QSGNPT-GHPVVFLHGGPGG-GTTPSNRRFFD-PDFYRIILFDQRGAGKSTPHACLDQNTT 96 (331)
Q Consensus 21 ~~~~~~~~~~~g~~l~~~-~~g~~~-~~~vl~~HG~~~~-~~~~~~~~~~~-~~g~~vi~~D~~G~G~s~~~~~~~~~~~ 96 (331)
..+...+.++.|-.+... ...+.. .+++|++||.... +....+...+. .-+++|+.+|++|+|.|.+.+.. ....
T Consensus 34 ~v~v~~~~t~rgn~~~~~y~~~~~~~~~~lly~hGNa~Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE-~n~y 112 (258)
T KOG1552|consen 34 FVEVFKVKTSRGNEIVCMYVRPPEAAHPTLLYSHGNAADLGQMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSE-RNLY 112 (258)
T ss_pred ccceEEeecCCCCEEEEEEEcCccccceEEEEcCCcccchHHHHHHHHHHhhcccceEEEEecccccccCCCccc-ccch
Confidence 344455566655343222 222223 4789999997433 21122222221 24899999999999999977632 2334
Q ss_pred HHHHHHHHHHHHHhC-CCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhc
Q 020064 97 WDLIDDIEKLRQHLE-IPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRD 175 (331)
Q Consensus 97 ~~~~~~~~~~~~~~~-~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (331)
+|.-+..+.+.+..| .++++|+|+|+|+..++.+|.+.| ++++|+.+|.....+..
T Consensus 113 ~Di~avye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL~SPf~S~~rv~--------------------- 169 (258)
T KOG1552|consen 113 ADIKAVYEWLRNRYGSPERIILYGQSIGTVPTVDLASRYP--LAAVVLHSPFTSGMRVA--------------------- 169 (258)
T ss_pred hhHHHHHHHHHhhcCCCceEEEEEecCCchhhhhHhhcCC--cceEEEeccchhhhhhh---------------------
Confidence 444444445555554 678999999999999999999998 99999999865432110
Q ss_pred cCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcc
Q 020064 176 LIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDS 255 (331)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (331)
..... .. .++. .+
T Consensus 170 --------------~~~~~---------------------------------------------------~~-~~~d-~f 182 (258)
T KOG1552|consen 170 --------------FPDTK---------------------------------------------------TT-YCFD-AF 182 (258)
T ss_pred --------------ccCcc---------------------------------------------------eE-Eeec-cc
Confidence 00000 00 0000 12
Q ss_pred hhhhhccccccccEEEEecCCCCccCCcchHHHHHhCCCC-cEEEecCCCCCCCcCCchhHHHHHHHHHHHhhhc
Q 020064 256 FLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEA-DFKVVADAGHSANEPGIAAELVATNEKLKNLIKN 329 (331)
Q Consensus 256 ~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~~ 329 (331)
...+.+..+ +||+|++||++|++++.....++.+..++. +..++.|+||.-..- ..++.+.+..|+..+.+
T Consensus 183 ~~i~kI~~i-~~PVLiiHgtdDevv~~sHg~~Lye~~k~~~epl~v~g~gH~~~~~--~~~yi~~l~~f~~~~~~ 254 (258)
T KOG1552|consen 183 PNIEKISKI-TCPVLIIHGTDDEVVDFSHGKALYERCKEKVEPLWVKGAGHNDIEL--YPEYIEHLRRFISSVLP 254 (258)
T ss_pred cccCcceec-cCCEEEEecccCceecccccHHHHHhccccCCCcEEecCCCccccc--CHHHHHHHHHHHHHhcc
Confidence 224567778 699999999999999999999999999764 888899999987554 67788999999987754
|
|
| >PRK07868 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=99.88 E-value=7.7e-21 Score=174.12 Aligned_cols=270 Identities=13% Similarity=0.094 Sum_probs=145.1
Q ss_pred CCCcEEEeccCCCCCCCCCc------ccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHH---hCCCc
Q 020064 44 TGHPVVFLHGGPGGGTTPSN------RRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQH---LEIPE 114 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~~~~~------~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 114 (331)
.++||||+||+..+...|.. +..+.++||+|+++|+ |.++.+......++.+++..+.+.++. +..++
T Consensus 66 ~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~~~~~~~~~l~~~i~~l~~~l~~v~~~~~~~ 142 (994)
T PRK07868 66 VGPPVLMVHPMMMSADMWDVTRDDGAVGILHRAGLDPWVIDF---GSPDKVEGGMERNLADHVVALSEAIDTVKDVTGRD 142 (994)
T ss_pred CCCcEEEECCCCCCccceecCCcccHHHHHHHCCCEEEEEcC---CCCChhHcCccCCHHHHHHHHHHHHHHHHHhhCCc
Confidence 56899999999888777664 3556678999999994 666554322235666666666555554 34468
Q ss_pred EEEEEeChhHHHHHHHHHhC-CCceeeEEEeccccchhhhhh-hHhh---cccccCChh-hHHhhhccCCcchhhhhHHh
Q 020064 115 WQVFGGSWGSTLALAYSLAH-PDKVTGLVLRGIFLLRKKEID-WFYE---GGAAAIYPD-AWESFRDLIPENERSCFVDA 188 (331)
Q Consensus 115 v~lvG~S~Gg~~a~~~a~~~-p~~v~~li~~~~~~~~~~~~~-~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 188 (331)
++++||||||.+++.+++.+ +++|+++|+++++........ .+.. ........+ .+.. ..++.. +...
T Consensus 143 v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~p~~----~~~~ 216 (994)
T PRK07868 143 VHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPMGIPAGLAAAAADFMADHVFNR--LDIPGW----MART 216 (994)
T ss_pred eEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcccchhhhhhcccccchhhhhhc--CCCCHH----HHHH
Confidence 99999999999999998755 568999999888754321100 0000 000000000 0000 000000 0000
Q ss_pred hccccCCCchHHHHHHHHHhhhHHHhhh-cCCCChhhhhcCCccH-H----HHHHhhhhhhhhhccCCCCCcchh---hh
Q 020064 189 YSKRLNSDDKETQYAAARAWTKWEMMTA-HLLPNEENIKRGEDDI-F----SLAFARIENHYFLNKGFFPSDSFL---LD 259 (331)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~---~~ 259 (331)
.+..+. . .........+. ..... ....+.+......... | ...+..+...++............ ..
T Consensus 217 ~~~~l~-p--~~~~~~~~~~~--~~l~~~~~~~~~e~~~~~~~~~~w~~~~g~~~~~~~~~~~~~n~~~~g~~~~~~~~~ 291 (994)
T PRK07868 217 GFQMLD-P--VKTAKARVDFL--RQLHDREALLPREQQRRFLESEGWIAWSGPAISELLKQFIAHNRMMTGGFAINGQMV 291 (994)
T ss_pred HHHhcC-h--hHHHHHHHHHH--HhcCchhhhccchhhHhHHHHhhccccchHHHHHHHHHHHHhCcccCceEEECCEEc
Confidence 000000 0 00000000000 00000 0000000000000000 0 000111111111111111111111 23
Q ss_pred hccccccccEEEEecCCCCccCCcchHHHHHhCCCCcE-EEecCCCCCCCc--CCchhHHHHHHHHHHHhhh
Q 020064 260 NIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADF-KVVADAGHSANE--PGIAAELVATNEKLKNLIK 328 (331)
Q Consensus 260 ~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~-~~~~~~gH~~~~--~~~~~~~~~~i~~fl~~~~ 328 (331)
.+.+| ++|+|+|+|++|.++|++.++.+.+.++++++ .+++++||+.+. ...++++...|.+||++-.
T Consensus 292 ~L~~i-~~P~L~i~G~~D~ivp~~~~~~l~~~i~~a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~~~ 362 (994)
T PRK07868 292 TLADI-TCPVLAFVGEVDDIGQPASVRGIRRAAPNAEVYESLIRAGHFGLVVGSRAAQQTWPTVADWVKWLE 362 (994)
T ss_pred chhhC-CCCEEEEEeCCCCCCCHHHHHHHHHhCCCCeEEEEeCCCCCEeeeechhhhhhhChHHHHHHHHhc
Confidence 58899 59999999999999999999999999999997 678999999754 3458889999999998754
|
|
| >KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.9e-22 Score=140.57 Aligned_cols=221 Identities=17% Similarity=0.228 Sum_probs=150.4
Q ss_pred CCCccceeEeCCCceEE-EEeCCCCCCCcEEEeccCCCCCCCC-Ccc-cccCCCCcEEEEecCCCCCCCCCCCCCCccch
Q 020064 20 EPYSTGILKVSDIHTIY-WEQSGNPTGHPVVFLHGGPGGGTTP-SNR-RFFDPDFYRIILFDQRGAGKSTPHACLDQNTT 96 (331)
Q Consensus 20 ~~~~~~~~~~~~g~~l~-~~~~g~~~~~~vl~~HG~~~~~~~~-~~~-~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~ 96 (331)
.+++.-.+.+.|..++. |+.....+.|+++++|+..++-... ..+ ..+..-+.+|+.+++||+|.|.+.+. .
T Consensus 52 ~pye~i~l~T~D~vtL~a~~~~~E~S~pTlLyfh~NAGNmGhr~~i~~~fy~~l~mnv~ivsYRGYG~S~Gsps-----E 126 (300)
T KOG4391|consen 52 MPYERIELRTRDKVTLDAYLMLSESSRPTLLYFHANAGNMGHRLPIARVFYVNLKMNVLIVSYRGYGKSEGSPS-----E 126 (300)
T ss_pred CCceEEEEEcCcceeEeeeeecccCCCceEEEEccCCCcccchhhHHHHHHHHcCceEEEEEeeccccCCCCcc-----c
Confidence 56777788888888885 4444445789999999976653332 222 22335689999999999999997763 2
Q ss_pred HHHHHHHHHHHHHh------CCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhH
Q 020064 97 WDLIDDIEKLRQHL------EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAW 170 (331)
Q Consensus 97 ~~~~~~~~~~~~~~------~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (331)
+-+.-|-+++++.+ +..++++.|.|.||.+|+.+|++..+++.++|+-++....+.... ...+|
T Consensus 127 ~GL~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp~~~i-------~~v~p--- 196 (300)
T KOG4391|consen 127 EGLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIPHMAI-------PLVFP--- 196 (300)
T ss_pred cceeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeechhccchhhhh-------heecc---
Confidence 33344445555554 445899999999999999999999999999999988665321100 00000
Q ss_pred HhhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCC
Q 020064 171 ESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGF 250 (331)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (331)
+...+... |. ...
T Consensus 197 --------------~~~k~i~~---------------lc----~kn---------------------------------- 209 (300)
T KOG4391|consen 197 --------------FPMKYIPL---------------LC----YKN---------------------------------- 209 (300)
T ss_pred --------------chhhHHHH---------------HH----HHh----------------------------------
Confidence 00000000 00 000
Q ss_pred CCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCC--CCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhhh
Q 020064 251 FPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWP--EADFKVVADAGHSANEPGIAAELVATNEKLKNLIK 328 (331)
Q Consensus 251 ~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~ 328 (331)
.+.....+..- ..|.|++.|.+|.++||-..+.+.+..| +.++.++|++.|.-..- .+-+.+.|.+||.++-
T Consensus 210 ---~~~S~~ki~~~-~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~Krl~eFP~gtHNDT~i--~dGYfq~i~dFlaE~~ 283 (300)
T KOG4391|consen 210 ---KWLSYRKIGQC-RMPFLFISGLKDELVPPVMMRQLYELCPSRTKRLAEFPDGTHNDTWI--CDGYFQAIEDFLAEVV 283 (300)
T ss_pred ---hhcchhhhccc-cCceEEeecCccccCCcHHHHHHHHhCchhhhhheeCCCCccCceEE--eccHHHHHHHHHHHhc
Confidence 00011223334 5999999999999999999999999986 57899999999987543 4558899999998763
|
|
| >COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.9e-20 Score=147.36 Aligned_cols=263 Identities=24% Similarity=0.258 Sum_probs=147.2
Q ss_pred CceEEEEeCCCCCCCcEEEeccCCCCCCCCCc----ccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHH
Q 020064 32 IHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSN----RRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLR 107 (331)
Q Consensus 32 g~~l~~~~~g~~~~~~vl~~HG~~~~~~~~~~----~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~ 107 (331)
...+.|...+.. +|+|+++||++++...+.. ....... |+++++|+||||.|. .. ......+++++..++
T Consensus 9 ~~~~~~~~~~~~-~~~i~~~hg~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~g~g~s~-~~---~~~~~~~~~~~~~~~ 82 (282)
T COG0596 9 GVRLAYREAGGG-GPPLVLLHGFPGSSSVWRPVFKVLPALAAR-YRVIAPDLRGHGRSD-PA---GYSLSAYADDLAALL 82 (282)
T ss_pred CeEEEEeecCCC-CCeEEEeCCCCCchhhhHHHHHHhhccccc-eEEEEecccCCCCCC-cc---cccHHHHHHHHHHHH
Confidence 346677776654 6689999998776554333 1112123 999999999999997 11 234455599999999
Q ss_pred HHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHH
Q 020064 108 QHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVD 187 (331)
Q Consensus 108 ~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (331)
+.++..+++++|||+||.+++.++.++|++++++|++++.............. ..........................
T Consensus 83 ~~~~~~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (282)
T COG0596 83 DALGLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQP-AGAAPLAALADLLLGLDAAAFAALLA 161 (282)
T ss_pred HHhCCCceEEEEecccHHHHHHHHHhcchhhheeeEecCCCCcccccCccccC-ccccchhhhhhhhhccchhhhhhhhh
Confidence 99998899999999999999999999999999999999765411000000000 00000000000000000000000000
Q ss_pred hh--ccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhh--hhhhccCCCCCcchhhhhccc
Q 020064 188 AY--SKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIEN--HYFLNKGFFPSDSFLLDNIDN 263 (331)
Q Consensus 188 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~ 263 (331)
.. ......... ........ ................ ......... .......+..
T Consensus 162 ~~~~~~~~~~~~~----------------~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 219 (282)
T COG0596 162 ALGLLAALAAAAR----------------AGLAEALR----APLLGAAAAAFARAARADLAAALLALL--DRDLRAALAR 219 (282)
T ss_pred cccccccccccch----------------hccccccc----cccchhHhhhhhhhcccccchhhhccc--ccccchhhcc
Confidence 00 000000000 00000000 0000000000000000 000000000 0023345667
Q ss_pred cccccEEEEecCCCCccCCcchHHHHHhCCC-CcEEEecCCCCCCCcCCchhHHHHHHHHHHH
Q 020064 264 IRHINATIVQGRYDVCCPMMSAWDLHKAWPE-ADFKVVADAGHSANEPGIAAELVATNEKLKN 325 (331)
Q Consensus 264 i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~ 325 (331)
+ ++|+++++|++|.+.|......+.+.+++ .++++++++||+.+.++ ++.+.+.+.+|++
T Consensus 220 ~-~~P~l~i~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~-p~~~~~~i~~~~~ 280 (282)
T COG0596 220 I-TVPTLIIHGEDDPVVPAELARRLAAALPNDARLVVIPGAGHFPHLEA-PEAFAAALLAFLE 280 (282)
T ss_pred C-CCCeEEEecCCCCcCCHHHHHHHHhhCCCCceEEEeCCCCCcchhhc-HHHHHHHHHHHHh
Confidence 7 59999999999977766556777777885 89999999999999997 8899888888543
|
|
| >COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.86 E-value=1e-19 Score=140.81 Aligned_cols=287 Identities=17% Similarity=0.159 Sum_probs=164.0
Q ss_pred ceEEEEeCCCCC---CCcEEEeccCCCCCC-----------CCCc----ccccCCCCcEEEEecCCCCC-CCCCCC----
Q 020064 33 HTIYWEQSGNPT---GHPVVFLHGGPGGGT-----------TPSN----RRFFDPDFYRIILFDQRGAG-KSTPHA---- 89 (331)
Q Consensus 33 ~~l~~~~~g~~~---~~~vl~~HG~~~~~~-----------~~~~----~~~~~~~g~~vi~~D~~G~G-~s~~~~---- 89 (331)
..+.|.++|..+ ..+||++|+..++.. ||.. -..+....|.||+.|-.|.+ .|..+.
T Consensus 36 ~~vay~T~Gtln~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~p 115 (368)
T COG2021 36 ARVAYETYGTLNAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSINP 115 (368)
T ss_pred cEEEEEecccccccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcCC
Confidence 378999999644 357999999766432 2221 12233467999999999865 333222
Q ss_pred -------CCCccchHHHHHHHHHHHHHhCCCcEE-EEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcc
Q 020064 90 -------CLDQNTTWDLIDDIEKLRQHLEIPEWQ-VFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGG 161 (331)
Q Consensus 90 -------~~~~~~~~~~~~~~~~~~~~~~~~~v~-lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~ 161 (331)
....+++.|++..-..+++++|++++. +||-||||+.++.++..+|++|+.+|.+++..........+....
T Consensus 116 ~g~~yg~~FP~~ti~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s~~~ia~~~~~ 195 (368)
T COG2021 116 GGKPYGSDFPVITIRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLSAQNIAFNEVQ 195 (368)
T ss_pred CCCccccCCCcccHHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChHHHhhhheecccccCCHHHHHHHHHH
Confidence 113468889999889999999999987 899999999999999999999999999998766443221111110
Q ss_pred c-ccCChhhHHh--hhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhh----h----HHHhhhcC-CCChhhhhcCC
Q 020064 162 A-AAIYPDAWES--FRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWT----K----WEMMTAHL-LPNEENIKRGE 229 (331)
Q Consensus 162 ~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~----~~~~~~~~-~~~~~~~~~~~ 229 (331)
. .......|.. +.....+.......+.+................+... . .....+++ .........++
T Consensus 196 r~AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~~~~~~~~~f~vESYL~~qg~kf~~rfD 275 (368)
T COG2021 196 RQAIEADPDWNGGDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQADPLRGGGVRFAVESYLDYQGDKFVARFD 275 (368)
T ss_pred HHHHHhCCCccCCCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhcccccccccCCCchhHHHHHHHHHHHHHHHhccC
Confidence 0 0000111110 0000000001111111111111110000000000000 0 00000000 01111222222
Q ss_pred ccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCCCCc-EEEe-cCCCCCC
Q 020064 230 DDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEAD-FKVV-ADAGHSA 307 (331)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~-~~~~-~~~gH~~ 307 (331)
...+......++.. .......++.+.|++++ +|+|++.-+.|...|++..+.+.+.++.+. ++++ ...||..
T Consensus 276 aNsYL~lt~ald~~-----D~s~~~~~l~~al~~i~-~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~~~~i~S~~GHDa 349 (368)
T COG2021 276 ANSYLYLTRALDYH-----DVSRGRGDLTAALARIK-APVLVVGITSDWLFPPELQRALAEALPAAGALREIDSPYGHDA 349 (368)
T ss_pred cchHHHHHHHHHhc-----CCCCCcCcHHHHHhcCc-cCEEEEEecccccCCHHHHHHHHHhccccCceEEecCCCCchh
Confidence 22222222222111 11111345667799995 999999999999999999999999998766 7666 4569988
Q ss_pred CcCCchhHHHHHHHHHHHh
Q 020064 308 NEPGIAAELVATNEKLKNL 326 (331)
Q Consensus 308 ~~~~~~~~~~~~i~~fl~~ 326 (331)
++.+ .+.+...|..||+.
T Consensus 350 FL~e-~~~~~~~i~~fL~~ 367 (368)
T COG2021 350 FLVE-SEAVGPLIRKFLAL 367 (368)
T ss_pred hhcc-hhhhhHHHHHHhhc
Confidence 7775 77788999999875
|
|
| >PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A | Back alignment and domain information |
|---|
Probab=99.86 E-value=6.8e-22 Score=141.27 Aligned_cols=143 Identities=22% Similarity=0.326 Sum_probs=109.4
Q ss_pred cEEEeccCCCCC-CCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCcEEEEEeChhHH
Q 020064 47 PVVFLHGGPGGG-TTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGST 125 (331)
Q Consensus 47 ~vl~~HG~~~~~-~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~ 125 (331)
+||++||++++. .+......+.++||.|+.+|+|++|.+... ...+++.+++. .+..+.++++++|||+||.
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~-----~~~~~~~~~~~--~~~~~~~~i~l~G~S~Gg~ 73 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALAEQGYAVVAFDYPGHGDSDGA-----DAVERVLADIR--AGYPDPDRIILIGHSMGGA 73 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHHHTTEEEEEESCTTSTTSHHS-----HHHHHHHHHHH--HHHCTCCEEEEEEETHHHH
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEecCCCCccchh-----HHHHHHHHHHH--hhcCCCCcEEEEEEccCcH
Confidence 589999976653 345667777789999999999999988322 23333444333 1223668999999999999
Q ss_pred HHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhccccCCCchHHHHHHH
Q 020064 126 LALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAA 205 (331)
Q Consensus 126 ~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (331)
+++.++.+. .+++++|++++...
T Consensus 74 ~a~~~~~~~-~~v~~~v~~~~~~~-------------------------------------------------------- 96 (145)
T PF12695_consen 74 IAANLAARN-PRVKAVVLLSPYPD-------------------------------------------------------- 96 (145)
T ss_dssp HHHHHHHHS-TTESEEEEESESSG--------------------------------------------------------
T ss_pred HHHHHhhhc-cceeEEEEecCccc--------------------------------------------------------
Confidence 999999998 68999999997211
Q ss_pred HHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCCCccCCcch
Q 020064 206 RAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSA 285 (331)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~ 285 (331)
.+.+.+. ++|+++++|++|..++++..
T Consensus 97 ----------------------------------------------------~~~~~~~-~~pv~~i~g~~D~~~~~~~~ 123 (145)
T PF12695_consen 97 ----------------------------------------------------SEDLAKI-RIPVLFIHGENDPLVPPEQV 123 (145)
T ss_dssp ----------------------------------------------------CHHHTTT-TSEEEEEEETT-SSSHHHHH
T ss_pred ----------------------------------------------------hhhhhcc-CCcEEEEEECCCCcCCHHHH
Confidence 1123345 59999999999999999999
Q ss_pred HHHHHhCC-CCcEEEecCCCCC
Q 020064 286 WDLHKAWP-EADFKVVADAGHS 306 (331)
Q Consensus 286 ~~~~~~~~-~~~~~~~~~~gH~ 306 (331)
+++.+.++ +.+++++++++|+
T Consensus 124 ~~~~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 124 RRLYEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp HHHHHHHCSSEEEEEETTS-TT
T ss_pred HHHHHHcCCCcEEEEeCCCcCc
Confidence 99988886 5899999999996
|
... |
| >KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.3e-21 Score=142.63 Aligned_cols=103 Identities=21% Similarity=0.325 Sum_probs=82.0
Q ss_pred CCCCcEEEeccCCCCCCCCC-cccccCC-CCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhC---CCcEEE
Q 020064 43 PTGHPVVFLHGGPGGGTTPS-NRRFFDP-DFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLE---IPEWQV 117 (331)
Q Consensus 43 ~~~~~vl~~HG~~~~~~~~~-~~~~~~~-~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~v~l 117 (331)
+.+|.++++||++.+...|. ++..+.. ...+|+++|+||||++..... .+.+.+.++.|+-++++.+- ..+|+|
T Consensus 72 t~gpil~l~HG~G~S~LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e-~dlS~eT~~KD~~~~i~~~fge~~~~iil 150 (343)
T KOG2564|consen 72 TEGPILLLLHGGGSSALSFAIFASELKSKIRCRCLALDLRGHGETKVENE-DDLSLETMSKDFGAVIKELFGELPPQIIL 150 (343)
T ss_pred CCccEEEEeecCcccchhHHHHHHHHHhhcceeEEEeeccccCccccCCh-hhcCHHHHHHHHHHHHHHHhccCCCceEE
Confidence 46888999999888766544 4444433 567899999999999985543 46899999999999998873 458999
Q ss_pred EEeChhHHHHHHHHHhC--CCceeeEEEeccc
Q 020064 118 FGGSWGSTLALAYSLAH--PDKVTGLVLRGIF 147 (331)
Q Consensus 118 vG~S~Gg~~a~~~a~~~--p~~v~~li~~~~~ 147 (331)
|||||||.++.+.|... |. +.|++.++-.
T Consensus 151 VGHSmGGaIav~~a~~k~lps-l~Gl~viDVV 181 (343)
T KOG2564|consen 151 VGHSMGGAIAVHTAASKTLPS-LAGLVVIDVV 181 (343)
T ss_pred Eeccccchhhhhhhhhhhchh-hhceEEEEEe
Confidence 99999999999887754 65 8999998864
|
|
| >KOG1838 consensus Alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.2e-19 Score=143.29 Aligned_cols=279 Identities=18% Similarity=0.158 Sum_probs=155.0
Q ss_pred CCCCCCccceeEeCCCceEEEEeC--CC-------CCCCcEEEeccCCCCCC---CCCcccccCCCCcEEEEecCCCCCC
Q 020064 17 PYVEPYSTGILKVSDIHTIYWEQS--GN-------PTGHPVVFLHGGPGGGT---TPSNRRFFDPDFYRIILFDQRGAGK 84 (331)
Q Consensus 17 ~~~~~~~~~~~~~~~g~~l~~~~~--g~-------~~~~~vl~~HG~~~~~~---~~~~~~~~~~~g~~vi~~D~~G~G~ 84 (331)
.+...+++..++++||.++.+... +. .+.|.||++||..+++. ...++....++||+|++++.||+|.
T Consensus 88 ~p~~~y~Reii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g 167 (409)
T KOG1838|consen 88 KPPVEYTREIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGG 167 (409)
T ss_pred CCCCcceeEEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCC
Confidence 345677888999999988876533 11 24588999999655433 2556667778999999999999999
Q ss_pred CCCCC--CCCccchHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCC---ceeeEEEeccccchhhhhhhHhh
Q 020064 85 STPHA--CLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPD---KVTGLVLRGIFLLRKKEIDWFYE 159 (331)
Q Consensus 85 s~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~---~v~~li~~~~~~~~~~~~~~~~~ 159 (331)
|.-.. -+.....+|+.+.+..+.+.....+...+|.||||.+.+.+..+..+ .+.++++++|...... .+...
T Consensus 168 ~~LtTpr~f~ag~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~~~--~~~~~ 245 (409)
T KOG1838|consen 168 SKLTTPRLFTAGWTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLLAA--SRSIE 245 (409)
T ss_pred CccCCCceeecCCHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhhhh--hhHHh
Confidence 87443 11223455666666666666667799999999999999999987644 3455555555432100 00000
Q ss_pred cccccCChhhHHhhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhh
Q 020064 160 GGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFAR 239 (331)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (331)
.......+.... . ......+......+..+.. .-....+......+-..+..
T Consensus 246 ---~~~~~~~y~~~l---~-~~l~~~~~~~r~~~~~~~v---------------------d~d~~~~~~SvreFD~~~t~ 297 (409)
T KOG1838|consen 246 ---TPLYRRFYNRAL---T-LNLKRIVLRHRHTLFEDPV---------------------DFDVILKSRSVREFDEALTR 297 (409)
T ss_pred ---cccchHHHHHHH---H-HhHHHHHhhhhhhhhhccc---------------------hhhhhhhcCcHHHHHhhhhh
Confidence 000000000000 0 0000011111110000000 00000000000011111111
Q ss_pred hhhhhhhccCCCCCcchhhhhccccccccEEEEecCCCCccCCcc-hHHHHHhCCCCcEEEecCCCCCCCcCC---chhH
Q 020064 240 IENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMS-AWDLHKAWPEADFKVVADAGHSANEPG---IAAE 315 (331)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~gH~~~~~~---~~~~ 315 (331)
....+-....++. .......+.+|+ +|+|+|++.+|+++|+.. -.......|++-+++-..+||..+.+. ....
T Consensus 298 ~~~gf~~~deYY~-~aSs~~~v~~I~-VP~L~ina~DDPv~p~~~ip~~~~~~np~v~l~~T~~GGHlgfleg~~p~~~~ 375 (409)
T KOG1838|consen 298 PMFGFKSVDEYYK-KASSSNYVDKIK-VPLLCINAADDPVVPEEAIPIDDIKSNPNVLLVITSHGGHLGFLEGLWPSART 375 (409)
T ss_pred hhcCCCcHHHHHh-hcchhhhccccc-ccEEEEecCCCCCCCcccCCHHHHhcCCcEEEEEeCCCceeeeeccCCCccch
Confidence 1100000000111 344556899995 999999999999999853 334455568888888899999987765 3555
Q ss_pred HHHH-HHHHHHhh
Q 020064 316 LVAT-NEKLKNLI 327 (331)
Q Consensus 316 ~~~~-i~~fl~~~ 327 (331)
+++. +.+|+...
T Consensus 376 w~~~~l~ef~~~~ 388 (409)
T KOG1838|consen 376 WMDKLLVEFLGNA 388 (409)
T ss_pred hHHHHHHHHHHHH
Confidence 6666 77777654
|
|
| >COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.85 E-value=8e-20 Score=138.99 Aligned_cols=279 Identities=16% Similarity=0.103 Sum_probs=144.6
Q ss_pred CCCccceeEeCCCceEEE-EeC-C-CCCCCcEEEeccCCCCCCC---CCcccccCCCCcEEEEecCCCCCCCCCCC--CC
Q 020064 20 EPYSTGILKVSDIHTIYW-EQS-G-NPTGHPVVFLHGGPGGGTT---PSNRRFFDPDFYRIILFDQRGAGKSTPHA--CL 91 (331)
Q Consensus 20 ~~~~~~~~~~~~g~~l~~-~~~-g-~~~~~~vl~~HG~~~~~~~---~~~~~~~~~~g~~vi~~D~~G~G~s~~~~--~~ 91 (331)
...+...+.++||-.+-. +.. + ....|.||++||..|+... ..+...+.++||.|+++++|||+.+.... -+
T Consensus 47 ~~~~re~v~~pdg~~~~ldw~~~p~~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~~y 126 (345)
T COG0429 47 VAYTRERLETPDGGFIDLDWSEDPRAAKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSPRLY 126 (345)
T ss_pred cccceEEEEcCCCCEEEEeeccCccccCCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCccee
Confidence 345566788887754433 222 2 2345789999996555333 44666677899999999999999987532 11
Q ss_pred CccchHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCC--ceeeEEEeccccchhhhhhhHhhcccc-cCChh
Q 020064 92 DQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPD--KVTGLVLRGIFLLRKKEIDWFYEGGAA-AIYPD 168 (331)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~--~v~~li~~~~~~~~~~~~~~~~~~~~~-~~~~~ 168 (331)
.....+|++.-+..+.......++..||.|+||.+...+.....+ .+.+.+.++.+.........+ ..+.. .++..
T Consensus 127 h~G~t~D~~~~l~~l~~~~~~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~~~~~~l-~~~~s~~ly~r 205 (345)
T COG0429 127 HSGETEDIRFFLDWLKARFPPRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLEACAYRL-DSGFSLRLYSR 205 (345)
T ss_pred cccchhHHHHHHHHHHHhCCCCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHHHHHHHHh-cCchhhhhhHH
Confidence 122223333333333334456799999999999554444444322 355555555544332111111 11111 11111
Q ss_pred hHHhhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhcc
Q 020064 169 AWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNK 248 (331)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (331)
.+.+.. ...+..-...+...-+.......+.......+........-.+ ... ..||.
T Consensus 206 ~l~~~L--------~~~~~~kl~~l~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf------------~da-~dYYr-- 262 (345)
T COG0429 206 YLLRNL--------KRNAARKLKELEPSLPGTVLAAIKRCRTIREFDDLLTAPLHGF------------ADA-EDYYR-- 262 (345)
T ss_pred HHHHHH--------HHHHHHHHHhcCcccCcHHHHHHHhhchHHhccceeeecccCC------------CcH-HHHHH--
Confidence 111000 0001110111100101110111111111111111000000000 000 00111
Q ss_pred CCCCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHH-hCCCCcEEEecCCCCCCCcCC---chh-HHHHHHHHH
Q 020064 249 GFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHK-AWPEADFKVVADAGHSANEPG---IAA-ELVATNEKL 323 (331)
Q Consensus 249 ~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~-~~~~~~~~~~~~~gH~~~~~~---~~~-~~~~~i~~f 323 (331)
.......|.+|+ +|+|||++.+|++++++....... ..|++.+.+.+.+||..+... .+. ...+.+.+|
T Consensus 263 -----~aSs~~~L~~Ir-~PtLii~A~DDP~~~~~~iP~~~~~~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~ 336 (345)
T COG0429 263 -----QASSLPLLPKIR-KPTLIINAKDDPFMPPEVIPKLQEMLNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDW 336 (345)
T ss_pred -----hccccccccccc-cceEEEecCCCCCCChhhCCcchhcCCCceEEEeecCCceEEeccCccccchhhHHHHHHHH
Confidence 233455889995 999999999999999987777776 568899999999999876542 132 566777778
Q ss_pred HHhhh
Q 020064 324 KNLIK 328 (331)
Q Consensus 324 l~~~~ 328 (331)
++...
T Consensus 337 l~~~~ 341 (345)
T COG0429 337 LDPFL 341 (345)
T ss_pred HHHHH
Confidence 77653
|
|
| >COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.7e-19 Score=154.66 Aligned_cols=234 Identities=18% Similarity=0.138 Sum_probs=152.0
Q ss_pred CCccceeEeCCCceEEEEeCCCCC------CCcEEEeccCCCCCC---CCCcccccCCCCcEEEEecCCCCCC---CCCC
Q 020064 21 PYSTGILKVSDIHTIYWEQSGNPT------GHPVVFLHGGPGGGT---TPSNRRFFDPDFYRIILFDQRGAGK---STPH 88 (331)
Q Consensus 21 ~~~~~~~~~~~g~~l~~~~~g~~~------~~~vl~~HG~~~~~~---~~~~~~~~~~~g~~vi~~D~~G~G~---s~~~ 88 (331)
..+...+...||.+++.+...+++ -|+||++||++.+.. +......++.+||.|+.+++||.+. .-..
T Consensus 364 ~~e~~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~~ 443 (620)
T COG1506 364 EPEPVTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGREFAD 443 (620)
T ss_pred CceEEEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHHHHH
Confidence 445667788899899877664321 168999999975422 3556677778999999999997433 2111
Q ss_pred ---CCCCccchHHHHHHHHHHHHHhC---CCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhccc
Q 020064 89 ---ACLDQNTTWDLIDDIEKLRQHLE---IPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGA 162 (331)
Q Consensus 89 ---~~~~~~~~~~~~~~~~~~~~~~~---~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~ 162 (331)
........+|+.+.+. ++...+ .++++++|||+||.+++.++.+.| ++++.+...+.......
T Consensus 444 ~~~~~~g~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~~~~~--------- 512 (620)
T COG1506 444 AIRGDWGGVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVDWLLY--------- 512 (620)
T ss_pred hhhhccCCccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcchhhhh---------
Confidence 1223346677777776 444443 348999999999999999999988 67777766664432110
Q ss_pred ccCChhhHHhhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhh
Q 020064 163 AAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIEN 242 (331)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (331)
......... ........ .. ..+.+.+.
T Consensus 513 -----------~~~~~~~~~-~~~~~~~~---~~----------------------~~~~~~~~---------------- 539 (620)
T COG1506 513 -----------FGESTEGLR-FDPEENGG---GP----------------------PEDREKYE---------------- 539 (620)
T ss_pred -----------ccccchhhc-CCHHHhCC---Cc----------------------ccChHHHH----------------
Confidence 000000000 00000000 00 00000000
Q ss_pred hhhhccCCCCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhC----CCCcEEEecCCCCCCCcCCchhHHHH
Q 020064 243 HYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAW----PEADFKVVADAGHSANEPGIAAELVA 318 (331)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~~~~~~~~~~ 318 (331)
.........++ ++|+|+|||++|..||.+.+.++.+.+ .+++++++|+.||.+...+....+.+
T Consensus 540 -----------~~sp~~~~~~i-~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~~~~~~~~~ 607 (620)
T COG1506 540 -----------DRSPIFYADNI-KTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRPENRVKVLK 607 (620)
T ss_pred -----------hcChhhhhccc-CCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCchhHHHHHH
Confidence 12233467788 599999999999999999999888877 35789999999999977555888899
Q ss_pred HHHHHHHhhhcC
Q 020064 319 TNEKLKNLIKNG 330 (331)
Q Consensus 319 ~i~~fl~~~~~~ 330 (331)
.+.+|+++..+.
T Consensus 608 ~~~~~~~~~~~~ 619 (620)
T COG1506 608 EILDWFKRHLKQ 619 (620)
T ss_pred HHHHHHHHHhcC
Confidence 999999876543
|
|
| >KOG4667 consensus Predicted esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.2e-20 Score=131.30 Aligned_cols=205 Identities=17% Similarity=0.188 Sum_probs=130.9
Q ss_pred CCCcEEEeccCCCCCCC---CCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCC-c--EEE
Q 020064 44 TGHPVVFLHGGPGGGTT---PSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIP-E--WQV 117 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~~---~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--v~l 117 (331)
+...+|++||+-++... ...+..+.+.|+.++.+|++|.|+|.....+..+ ...++|+..++.++... + -++
T Consensus 32 s~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~Gn~--~~eadDL~sV~q~~s~~nr~v~vi 109 (269)
T KOG4667|consen 32 STEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYYGNY--NTEADDLHSVIQYFSNSNRVVPVI 109 (269)
T ss_pred CceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccccCcc--cchHHHHHHHHHHhccCceEEEEE
Confidence 56789999998665332 4466677789999999999999999987654433 44569999999998643 3 348
Q ss_pred EEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhccccCCCc
Q 020064 118 FGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDD 197 (331)
Q Consensus 118 vG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (331)
+|||-||.+++.+|.++++ ++-+|.+++-........ ..+.+. .+......-.-+.
T Consensus 110 ~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl~~~I~-------------------eRlg~~----~l~~ike~Gfid~ 165 (269)
T KOG4667|consen 110 LGHSKGGDVVLLYASKYHD-IRNVINCSGRYDLKNGIN-------------------ERLGED----YLERIKEQGFIDV 165 (269)
T ss_pred EeecCccHHHHHHHHhhcC-chheEEcccccchhcchh-------------------hhhccc----HHHHHHhCCceec
Confidence 9999999999999999987 777888776544322110 000000 0111100000000
Q ss_pred hHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccc-cccEEEEecCC
Q 020064 198 KETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIR-HINATIVQGRY 276 (331)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~-~~P~l~i~G~~ 276 (331)
... ......+ ..++.+.. ++ ..+..+...+|. +||||-+||..
T Consensus 166 ~~r-----------kG~y~~r-vt~eSlmd-----------rL-------------ntd~h~aclkId~~C~VLTvhGs~ 209 (269)
T KOG4667|consen 166 GPR-----------KGKYGYR-VTEESLMD-----------RL-------------NTDIHEACLKIDKQCRVLTVHGSE 209 (269)
T ss_pred Ccc-----------cCCcCce-ecHHHHHH-----------HH-------------hchhhhhhcCcCccCceEEEeccC
Confidence 000 0000000 00000000 00 122222333332 69999999999
Q ss_pred CCccCCcchHHHHHhCCCCcEEEecCCCCCCCcC
Q 020064 277 DVCCPMMSAWDLHKAWPEADFKVVADAGHSANEP 310 (331)
Q Consensus 277 D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 310 (331)
|.+||.+.+.++++.+|+-++.++||+.|.....
T Consensus 210 D~IVPve~AkefAk~i~nH~L~iIEgADHnyt~~ 243 (269)
T KOG4667|consen 210 DEIVPVEDAKEFAKIIPNHKLEIIEGADHNYTGH 243 (269)
T ss_pred CceeechhHHHHHHhccCCceEEecCCCcCccch
Confidence 9999999999999999999999999999998654
|
|
| >PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.1e-19 Score=138.24 Aligned_cols=193 Identities=18% Similarity=0.192 Sum_probs=119.6
Q ss_pred cccccCCCCcEEEEecCCCCCCCCC------CCCCCccchHHHHHHHHHHHHHh--CCCcEEEEEeChhHHHHHHHHHhC
Q 020064 63 NRRFFDPDFYRIILFDQRGAGKSTP------HACLDQNTTWDLIDDIEKLRQHL--EIPEWQVFGGSWGSTLALAYSLAH 134 (331)
Q Consensus 63 ~~~~~~~~g~~vi~~D~~G~G~s~~------~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~lvG~S~Gg~~a~~~a~~~ 134 (331)
....++++||.|+.+|+||.+.... .........+|..+.+..+++.. +.+++.++|+|+||.+++.++.++
T Consensus 6 ~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~~~ 85 (213)
T PF00326_consen 6 NAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAATQH 85 (213)
T ss_dssp HHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHHHT
T ss_pred HHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhhccc
Confidence 3445668999999999999774321 11112234455555555555543 346899999999999999999999
Q ss_pred CCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHh
Q 020064 135 PDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMM 214 (331)
Q Consensus 135 p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (331)
|+++++++..++.......... ... +...........
T Consensus 86 ~~~f~a~v~~~g~~d~~~~~~~--------------------~~~-----~~~~~~~~~~~~------------------ 122 (213)
T PF00326_consen 86 PDRFKAAVAGAGVSDLFSYYGT--------------------TDI-----YTKAEYLEYGDP------------------ 122 (213)
T ss_dssp CCGSSEEEEESE-SSTTCSBHH--------------------TCC-----HHHGHHHHHSST------------------
T ss_pred ceeeeeeeccceecchhccccc--------------------ccc-----cccccccccCcc------------------
Confidence 9999999999886543211000 000 000000000000
Q ss_pred hhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccc--cccccEEEEecCCCCccCCcchHHHHHhC
Q 020064 215 TAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDN--IRHINATIVQGRYDVCCPMMSAWDLHKAW 292 (331)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--i~~~P~l~i~G~~D~~~~~~~~~~~~~~~ 292 (331)
...++... .......+.+ + ++|+|++||++|..||++.+.++.+.+
T Consensus 123 ----~~~~~~~~---------------------------~~s~~~~~~~~~~-~~P~li~hG~~D~~Vp~~~s~~~~~~L 170 (213)
T PF00326_consen 123 ----WDNPEFYR---------------------------ELSPISPADNVQI-KPPVLIIHGENDPRVPPSQSLRLYNAL 170 (213)
T ss_dssp ----TTSHHHHH---------------------------HHHHGGGGGGCGG-GSEEEEEEETTBSSSTTHHHHHHHHHH
T ss_pred ----chhhhhhh---------------------------hhccccccccccC-CCCEEEEccCCCCccCHHHHHHHHHHH
Confidence 00000000 0011123333 6 599999999999999999998888776
Q ss_pred ----CCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhhhcC
Q 020064 293 ----PEADFKVVADAGHSANEPGIAAELVATNEKLKNLIKNG 330 (331)
Q Consensus 293 ----~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~~~ 330 (331)
.+++++++|++||.+.......++.+.+.+|+++..++
T Consensus 171 ~~~g~~~~~~~~p~~gH~~~~~~~~~~~~~~~~~f~~~~l~~ 212 (213)
T PF00326_consen 171 RKAGKPVELLIFPGEGHGFGNPENRRDWYERILDFFDKYLKK 212 (213)
T ss_dssp HHTTSSEEEEEETT-SSSTTSHHHHHHHHHHHHHHHHHHTT-
T ss_pred HhcCCCEEEEEcCcCCCCCCCchhHHHHHHHHHHHHHHHcCC
Confidence 35889999999997765544778999999999987654
|
; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B .... |
| >TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.1e-19 Score=138.23 Aligned_cols=125 Identities=17% Similarity=0.107 Sum_probs=91.4
Q ss_pred ceeEeCCCceEEEEeCC--CCCCCcEEEeccCCCCCC-C----CCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchH
Q 020064 25 GILKVSDIHTIYWEQSG--NPTGHPVVFLHGGPGGGT-T----PSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTW 97 (331)
Q Consensus 25 ~~~~~~~g~~l~~~~~g--~~~~~~vl~~HG~~~~~~-~----~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~ 97 (331)
.+++...|....+.... ....++||++||+++... + ...+..+.+.||+|+++|+||||.|.... ...+++
T Consensus 3 ~~l~~~~g~~~~~~~~p~~~~~~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~--~~~~~~ 80 (266)
T TIGR03101 3 FFLDAPHGFRFCLYHPPVAVGPRGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDF--AAARWD 80 (266)
T ss_pred EEecCCCCcEEEEEecCCCCCCceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCcc--ccCCHH
Confidence 35666677433322222 222467999999765322 2 22456676789999999999999997554 235677
Q ss_pred HHHHHHHHHHH---HhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchh
Q 020064 98 DLIDDIEKLRQ---HLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRK 151 (331)
Q Consensus 98 ~~~~~~~~~~~---~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~ 151 (331)
.+++|+..+++ ..+.++++++||||||.+++.+|.++|++++++|+++|.....
T Consensus 81 ~~~~Dv~~ai~~L~~~~~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~g~ 137 (266)
T TIGR03101 81 VWKEDVAAAYRWLIEQGHPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVVSGK 137 (266)
T ss_pred HHHHHHHHHHHHHHhcCCCCEEEEEECHHHHHHHHHHHhCccccceEEEeccccchH
Confidence 88888777554 4466799999999999999999999999999999999876543
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily. |
| >PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3 | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.9e-19 Score=136.04 Aligned_cols=267 Identities=13% Similarity=0.146 Sum_probs=146.5
Q ss_pred cceeEeCCCceEEEEeCCCCC--CCcEEEeccCC-CCCC-CCCccc----ccCCCCcEEEEecCCCCCCCC--CCCCCCc
Q 020064 24 TGILKVSDIHTIYWEQSGNPT--GHPVVFLHGGP-GGGT-TPSNRR----FFDPDFYRIILFDQRGAGKST--PHACLDQ 93 (331)
Q Consensus 24 ~~~~~~~~g~~l~~~~~g~~~--~~~vl~~HG~~-~~~~-~~~~~~----~~~~~g~~vi~~D~~G~G~s~--~~~~~~~ 93 (331)
++.++++-| .+++...|+++ +|++|-.|-.+ +... +..+.. ..+.+.|.|+-+|.||+..-. -+.++..
T Consensus 1 eh~v~t~~G-~v~V~v~G~~~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~~f~i~Hi~aPGqe~ga~~~p~~y~y 79 (283)
T PF03096_consen 1 EHDVETPYG-SVHVTVQGDPKGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQNFCIYHIDAPGQEEGAATLPEGYQY 79 (283)
T ss_dssp -EEEEETTE-EEEEEEESS--TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHTTSEEEEEE-TTTSTT-----TT---
T ss_pred CceeccCce-EEEEEEEecCCCCCceEEEeccccccchHHHHHHhcchhHHHHhhceEEEEEeCCCCCCCcccccccccc
Confidence 356888888 99999999866 89999999944 3322 222111 122478999999999986543 3444445
Q ss_pred cchHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhh
Q 020064 94 NTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESF 173 (331)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (331)
.+++++++++..++++++++.++-+|...||.+..++|..+|++|.|+|++++.........|+..+-....+.
T Consensus 80 Psmd~LAe~l~~Vl~~f~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~gw~Ew~~~K~~~~~L~------ 153 (283)
T PF03096_consen 80 PSMDQLAEMLPEVLDHFGLKSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAGWMEWFYQKLSSWLLY------ 153 (283)
T ss_dssp --HHHHHCTHHHHHHHHT---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S---HHHHHHHHHH-----------
T ss_pred cCHHHHHHHHHHHHHhCCccEEEEEeeccchhhhhhccccCccceeEEEEEecCCCCccHHHHHHHHHhccccc------
Confidence 78999999999999999999999999999999999999999999999999999888777766665432111000
Q ss_pred hccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCC
Q 020064 174 RDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPS 253 (331)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (331)
...........++..++..-.... .....+.+... .. ...++..+.. +...+ ..
T Consensus 154 ~~gmt~~~~d~Ll~h~Fg~~~~~~---n~Dlv~~yr~~---l~-~~~Np~Nl~~-----f~~sy--------------~~ 207 (283)
T PF03096_consen 154 SYGMTSSVKDYLLWHYFGKEEEEN---NSDLVQTYRQH---LD-ERINPKNLAL-----FLNSY--------------NS 207 (283)
T ss_dssp --CTTS-HHHHHHHHHS-HHHHHC---T-HHHHHHHHH---HH-T-TTHHHHHH-----HHHHH--------------HT
T ss_pred ccccccchHHhhhhcccccccccc---cHHHHHHHHHH---Hh-cCCCHHHHHH-----HHHHH--------------hc
Confidence 001111111111111111100000 00000000000 00 0000000000 00000 00
Q ss_pred cchhhhhccccccccEEEEecCCCCccCCcchHHHHHhC-C-CCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhh
Q 020064 254 DSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAW-P-EADFKVVADAGHSANEPGIAAELVATNEKLKNLI 327 (331)
Q Consensus 254 ~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~-~-~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 327 (331)
..++...+... .||+|++.|++.+.. +.+.++..++ | +.++..+++||=.+..|+ |..+++.+.-|++-+
T Consensus 208 R~DL~~~~~~~-~c~vLlvvG~~Sp~~--~~vv~~ns~Ldp~~ttllkv~dcGglV~eEq-P~klaea~~lFlQG~ 279 (283)
T PF03096_consen 208 RTDLSIERPSL-GCPVLLVVGDNSPHV--DDVVEMNSKLDPTKTTLLKVADCGGLVLEEQ-PGKLAEAFKLFLQGM 279 (283)
T ss_dssp -----SECTTC-CS-EEEEEETTSTTH--HHHHHHHHHS-CCCEEEEEETT-TT-HHHH--HHHHHHHHHHHHHHT
T ss_pred cccchhhcCCC-CCCeEEEEecCCcch--hhHHHHHhhcCcccceEEEecccCCcccccC-cHHHHHHHHHHHccC
Confidence 34555566777 599999999999886 4556777777 3 578899999999999997 999999999999753
|
Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A. |
| >KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown] | Back alignment and domain information |
|---|
Probab=99.82 E-value=8.2e-18 Score=125.16 Aligned_cols=272 Identities=13% Similarity=0.118 Sum_probs=168.0
Q ss_pred CCccceeEeCCCceEEEEeCCCCC--CCcEEEecc-CCCCCC-C-----CCcccccCCCCcEEEEecCCCCCCCC--CCC
Q 020064 21 PYSTGILKVSDIHTIYWEQSGNPT--GHPVVFLHG-GPGGGT-T-----PSNRRFFDPDFYRIILFDQRGAGKST--PHA 89 (331)
Q Consensus 21 ~~~~~~~~~~~g~~l~~~~~g~~~--~~~vl~~HG-~~~~~~-~-----~~~~~~~~~~g~~vi~~D~~G~G~s~--~~~ 89 (331)
..+++.|++.-| .+++...|+++ +|++|-.|. +.+... + ......++ ..|.|+-+|.||+-.-. -+.
T Consensus 21 ~~~e~~V~T~~G-~v~V~V~Gd~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~-~~fcv~HV~~PGqe~gAp~~p~ 98 (326)
T KOG2931|consen 21 TCQEHDVETAHG-VVHVTVYGDPKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEIL-EHFCVYHVDAPGQEDGAPSFPE 98 (326)
T ss_pred cceeeeeccccc-cEEEEEecCCCCCCceEEEecccccchHhHhHHhhcCHhHHHHH-hheEEEecCCCccccCCccCCC
Confidence 367889999988 89999999766 788999999 444433 2 12223333 44999999999985443 344
Q ss_pred CCCccchHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhh
Q 020064 90 CLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDA 169 (331)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (331)
++...+.+++++++..++++++.+.|+-+|...|+.+..++|..||++|.|+|++++.+.......|....-...+
T Consensus 99 ~y~yPsmd~LAd~l~~VL~~f~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~gwiew~~~K~~s~~---- 174 (326)
T KOG2931|consen 99 GYPYPSMDDLADMLPEVLDHFGLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCAKGWIEWAYNKVSSNL---- 174 (326)
T ss_pred CCCCCCHHHHHHHHHHHHHhcCcceEEEecccccHHHHHHHHhcChhheeEEEEEecCCCCchHHHHHHHHHHHHH----
Confidence 4445789999999999999999999999999999999999999999999999999998887777777654311100
Q ss_pred HHhhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccC
Q 020064 170 WESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKG 249 (331)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (331)
|.. .........-++...+.+-.... .....+.++.. ... ..++.. +...+... .....
T Consensus 175 l~~--~Gmt~~~~d~ll~H~Fg~e~~~~---~~diVq~Yr~~---l~~-~~N~~N--------l~~fl~ay----n~R~D 233 (326)
T KOG2931|consen 175 LYY--YGMTQGVKDYLLAHHFGKEELGN---NSDIVQEYRQH---LGE-RLNPKN--------LALFLNAY----NGRRD 233 (326)
T ss_pred HHh--hchhhhHHHHHHHHHhccccccc---cHHHHHHHHHH---HHh-cCChhH--------HHHHHHHh----cCCCC
Confidence 000 00111111111111111100000 01111111100 000 000000 00000000 00000
Q ss_pred CCCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhC--CCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHh
Q 020064 250 FFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAW--PEADFKVVADAGHSANEPGIAAELVATNEKLKNL 326 (331)
Q Consensus 250 ~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 326 (331)
+ ..........+ +||+|++.|++.+.+. .+.++...+ .+.++..+.+||-.+..++ |..+.+.+.-|++-
T Consensus 234 L---~~~r~~~~~tl-kc~vllvvGd~Sp~~~--~vv~~n~~Ldp~~ttllk~~d~g~l~~e~q-P~kl~ea~~~FlqG 305 (326)
T KOG2931|consen 234 L---SIERPKLGTTL-KCPVLLVVGDNSPHVS--AVVECNSKLDPTYTTLLKMADCGGLVQEEQ-PGKLAEAFKYFLQG 305 (326)
T ss_pred c---cccCCCcCccc-cccEEEEecCCCchhh--hhhhhhcccCcccceEEEEcccCCcccccC-chHHHHHHHHHHcc
Confidence 0 00111112256 4999999999998874 455566666 3678999999999999987 99999999999863
|
|
| >PRK11460 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=5.5e-19 Score=135.06 Aligned_cols=174 Identities=15% Similarity=0.168 Sum_probs=108.4
Q ss_pred CCCCCcEEEeccCCCCCC-CCCcccccCCCCcEEEEecCCCCCCCCCCC---------CCCccc---hHHHHHHHHH---
Q 020064 42 NPTGHPVVFLHGGPGGGT-TPSNRRFFDPDFYRIILFDQRGAGKSTPHA---------CLDQNT---TWDLIDDIEK--- 105 (331)
Q Consensus 42 ~~~~~~vl~~HG~~~~~~-~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~---------~~~~~~---~~~~~~~~~~--- 105 (331)
.+..++||++||++++.. +......+...++.+..++.+|...+.... ...... +.+..+.+.+
T Consensus 13 ~~~~~~vIlLHG~G~~~~~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i~ 92 (232)
T PRK11460 13 KPAQQLLLLFHGVGDNPVAMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETVR 92 (232)
T ss_pred CCCCcEEEEEeCCCCChHHHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHHH
Confidence 345678999999777654 445555554444444444445543221100 000111 1222222323
Q ss_pred -HHHHhCC--CcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchh
Q 020064 106 -LRQHLEI--PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENER 182 (331)
Q Consensus 106 -~~~~~~~--~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (331)
+.+..+. ++++++|||+||.+++.++..+|+.+.+++.+++.... .
T Consensus 93 ~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~~--------------------------~----- 141 (232)
T PRK11460 93 YWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYAS--------------------------L----- 141 (232)
T ss_pred HHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEecccccc--------------------------c-----
Confidence 3333343 57999999999999999999999888888776642100 0
Q ss_pred hhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhcc
Q 020064 183 SCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNID 262 (331)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 262 (331)
. ...
T Consensus 142 -----------------------------------------------------------------------~-----~~~ 145 (232)
T PRK11460 142 -----------------------------------------------------------------------P-----ETA 145 (232)
T ss_pred -----------------------------------------------------------------------c-----ccc
Confidence 0 000
Q ss_pred ccccccEEEEecCCCCccCCcchHHHHHhCC----CCcEEEecCCCCCCCcCCchhHHHHHHHHHH
Q 020064 263 NIRHINATIVQGRYDVCCPMMSAWDLHKAWP----EADFKVVADAGHSANEPGIAAELVATNEKLK 324 (331)
Q Consensus 263 ~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl 324 (331)
.. ++|++++||++|+++|.+.++++.+.+. ++++++++++||.+..+. .+.+.+.+.+++
T Consensus 146 ~~-~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i~~~~-~~~~~~~l~~~l 209 (232)
T PRK11460 146 PT-ATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGHAIDPRL-MQFALDRLRYTV 209 (232)
T ss_pred cC-CCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCHHH-HHHHHHHHHHHc
Confidence 12 5899999999999999999888888763 467888999999996554 444444444444
|
|
| >PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.7e-17 Score=123.84 Aligned_cols=111 Identities=29% Similarity=0.295 Sum_probs=92.0
Q ss_pred EEeCCCCCCC--cEEEeccCCCCCC-CCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCC
Q 020064 37 WEQSGNPTGH--PVVFLHGGPGGGT-TPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIP 113 (331)
Q Consensus 37 ~~~~g~~~~~--~vl~~HG~~~~~~-~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (331)
|....+...+ +||-+||-+||.. +......+.+.|+|+|.+++||+|.++.+.. ..++..+-..-+.++++.++++
T Consensus 25 y~D~~~~gs~~gTVv~~hGsPGSH~DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~-~~~~n~er~~~~~~ll~~l~i~ 103 (297)
T PF06342_consen 25 YEDSLPSGSPLGTVVAFHGSPGSHNDFKYIRPPLDEAGIRFIGINYPGFGFTPGYPD-QQYTNEERQNFVNALLDELGIK 103 (297)
T ss_pred EEecCCCCCCceeEEEecCCCCCccchhhhhhHHHHcCeEEEEeCCCCCCCCCCCcc-cccChHHHHHHHHHHHHHcCCC
Confidence 4444443333 7999999888754 4566677778999999999999999997765 4688899999999999999976
Q ss_pred -cEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccch
Q 020064 114 -EWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLR 150 (331)
Q Consensus 114 -~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~ 150 (331)
+++++|||.||-.|+.+|..+| ..|+++++|+...
T Consensus 104 ~~~i~~gHSrGcenal~la~~~~--~~g~~lin~~G~r 139 (297)
T PF06342_consen 104 GKLIFLGHSRGCENALQLAVTHP--LHGLVLINPPGLR 139 (297)
T ss_pred CceEEEEeccchHHHHHHHhcCc--cceEEEecCCccc
Confidence 7889999999999999999996 6799999987653
|
|
| >COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.2e-17 Score=122.21 Aligned_cols=223 Identities=14% Similarity=0.065 Sum_probs=137.4
Q ss_pred CCCcEEEecc-CCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHH-HhCCCcEEEEEeC
Q 020064 44 TGHPVVFLHG-GPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQ-HLEIPEWQVFGGS 121 (331)
Q Consensus 44 ~~~~vl~~HG-~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~lvG~S 121 (331)
.+..++++|- |+++..+..+...+ ...+.++++++||+|.-...+ .-.+++++++.+...+. -+..+++.++|||
T Consensus 6 ~~~~L~cfP~AGGsa~~fr~W~~~l-p~~iel~avqlPGR~~r~~ep--~~~di~~Lad~la~el~~~~~d~P~alfGHS 82 (244)
T COG3208 6 ARLRLFCFPHAGGSASLFRSWSRRL-PADIELLAVQLPGRGDRFGEP--LLTDIESLADELANELLPPLLDAPFALFGHS 82 (244)
T ss_pred CCceEEEecCCCCCHHHHHHHHhhC-CchhheeeecCCCcccccCCc--ccccHHHHHHHHHHHhccccCCCCeeecccc
Confidence 3445777776 54445555555544 557999999999999876554 35689999999988887 4555789999999
Q ss_pred hhHHHHHHHHHhCC---CceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhccccCCCch
Q 020064 122 WGSTLALAYSLAHP---DKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDK 198 (331)
Q Consensus 122 ~Gg~~a~~~a~~~p---~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (331)
|||++|.++|.+.. ..+.++.+.++..+..... ..+....-..++..+...-.
T Consensus 83 mGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~--------------------~~i~~~~D~~~l~~l~~lgG---- 138 (244)
T COG3208 83 MGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRG--------------------KQIHHLDDADFLADLVDLGG---- 138 (244)
T ss_pred hhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCccc--------------------CCccCCCHHHHHHHHHHhCC----
Confidence 99999999998752 2367777777654411100 00000111111111111110
Q ss_pred HHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCCC
Q 020064 199 ETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDV 278 (331)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~ 278 (331)
.+++.+.......+.....+.+......+.+ ..-..+ +||+.++.|++|.
T Consensus 139 ---------------------~p~e~led~El~~l~LPilRAD~~~~e~Y~~--------~~~~pl-~~pi~~~~G~~D~ 188 (244)
T COG3208 139 ---------------------TPPELLEDPELMALFLPILRADFRALESYRY--------PPPAPL-ACPIHAFGGEKDH 188 (244)
T ss_pred ---------------------CChHHhcCHHHHHHHHHHHHHHHHHhccccc--------CCCCCc-CcceEEeccCcch
Confidence 1111111111111111111111111111101 011345 6999999999999
Q ss_pred ccCCcchHHHHHhCC-CCcEEEecCCCCCCCcCCchhHHHHHHHHHHH
Q 020064 279 CCPMMSAWDLHKAWP-EADFKVVADAGHSANEPGIAAELVATNEKLKN 325 (331)
Q Consensus 279 ~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~ 325 (331)
.+..+....|.+... ..++++++ +||+...++ .+++++.|.+.+.
T Consensus 189 ~vs~~~~~~W~~~t~~~f~l~~fd-GgHFfl~~~-~~~v~~~i~~~l~ 234 (244)
T COG3208 189 EVSRDELGAWREHTKGDFTLRVFD-GGHFFLNQQ-REEVLARLEQHLA 234 (244)
T ss_pred hccHHHHHHHHHhhcCCceEEEec-Ccceehhhh-HHHHHHHHHHHhh
Confidence 999998888988875 68999998 899999987 8899999988885
|
|
| >PLN02442 S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.8e-17 Score=129.64 Aligned_cols=105 Identities=16% Similarity=0.115 Sum_probs=72.2
Q ss_pred CCCcEEEeccCCCCCCCC----CcccccCCCCcEEEEecCCCCCC-----CCC-----C-------C-------CCCccc
Q 020064 44 TGHPVVFLHGGPGGGTTP----SNRRFFDPDFYRIILFDQRGAGK-----STP-----H-------A-------CLDQNT 95 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~~~----~~~~~~~~~g~~vi~~D~~G~G~-----s~~-----~-------~-------~~~~~~ 95 (331)
..|+|+++||++++...+ .....+...|+.|+.+|..++|. +.. . . ....+.
T Consensus 46 ~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (283)
T PLN02442 46 KVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYDYV 125 (283)
T ss_pred CCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcceeeccccCCCcccchhhhH
Confidence 357899999977664322 12233445799999999887661 100 0 0 000112
Q ss_pred hHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEecccc
Q 020064 96 TWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFL 148 (331)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~ 148 (331)
.+++...+....+.++.++++++||||||..++.++.++|+++++++++++..
T Consensus 126 ~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~ 178 (283)
T PLN02442 126 VKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIA 178 (283)
T ss_pred HHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCcc
Confidence 33444455555555677899999999999999999999999999999998864
|
|
| >TIGR02821 fghA_ester_D S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.78 E-value=5.3e-17 Score=127.95 Aligned_cols=105 Identities=16% Similarity=0.177 Sum_probs=73.3
Q ss_pred CCCcEEEeccCCCCCCCCCc---cccc-CCCCcEEEEecC--CCCCCCCCCC------------------CCCccchH-H
Q 020064 44 TGHPVVFLHGGPGGGTTPSN---RRFF-DPDFYRIILFDQ--RGAGKSTPHA------------------CLDQNTTW-D 98 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~~~~~---~~~~-~~~g~~vi~~D~--~G~G~s~~~~------------------~~~~~~~~-~ 98 (331)
+.|+|+++||++++...+.. ...+ .+.|+.||+||. +|+|.+.... ....+... .
T Consensus 41 ~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~ 120 (275)
T TIGR02821 41 PVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMYSY 120 (275)
T ss_pred CCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCccccccCCcCcccccchHHHH
Confidence 35789999998766543321 2233 346999999998 5554332100 00012233 3
Q ss_pred HHHHHHHHHHH---hCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEecccc
Q 020064 99 LIDDIEKLRQH---LEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFL 148 (331)
Q Consensus 99 ~~~~~~~~~~~---~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~ 148 (331)
+++++..+++. ++.++++++||||||.+++.++.++|+.+++++++++..
T Consensus 121 ~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~ 173 (275)
T TIGR02821 121 IVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIV 173 (275)
T ss_pred HHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCcc
Confidence 46778777776 455689999999999999999999999999999988764
|
This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well. |
| >PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.4e-18 Score=129.84 Aligned_cols=176 Identities=18% Similarity=0.152 Sum_probs=103.3
Q ss_pred CCCCcEEEeccCCCCCCCCCcccc--cCCCCcEEEEecCCC------CCC---CC-----CCCC--CCccchHHHHHHHH
Q 020064 43 PTGHPVVFLHGGPGGGTTPSNRRF--FDPDFYRIILFDQRG------AGK---ST-----PHAC--LDQNTTWDLIDDIE 104 (331)
Q Consensus 43 ~~~~~vl~~HG~~~~~~~~~~~~~--~~~~g~~vi~~D~~G------~G~---s~-----~~~~--~~~~~~~~~~~~~~ 104 (331)
+..++||++||.+++...+..... ....+..++.++-|. .|. +- .... .....+.+.++.+.
T Consensus 12 ~~~~lvi~LHG~G~~~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~~l~ 91 (216)
T PF02230_consen 12 KAKPLVILLHGYGDSEDLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAERLD 91 (216)
T ss_dssp T-SEEEEEE--TTS-HHHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHHHHH
T ss_pred CCceEEEEECCCCCCcchhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHHHHH
Confidence 367789999998776543322222 233567777776542 222 10 0000 01122333444455
Q ss_pred HHHHHh-----CCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCc
Q 020064 105 KLRQHL-----EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPE 179 (331)
Q Consensus 105 ~~~~~~-----~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (331)
++++.. ..++++++|+|+||.+++.++.++|+.+.++|++++.......
T Consensus 92 ~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~-------------------------- 145 (216)
T PF02230_consen 92 ELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESE-------------------------- 145 (216)
T ss_dssp HHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCC--------------------------
T ss_pred HHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeecccccccc--------------------------
Confidence 555432 4468999999999999999999999999999999985432100
Q ss_pred chhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhh
Q 020064 180 NERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLD 259 (331)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (331)
...
T Consensus 146 -----------------------------------------------------------------------------~~~ 148 (216)
T PF02230_consen 146 -----------------------------------------------------------------------------LED 148 (216)
T ss_dssp -----------------------------------------------------------------------------CHC
T ss_pred -----------------------------------------------------------------------------ccc
Confidence 000
Q ss_pred hccccccccEEEEecCCCCccCCcchHHHHHhC----CCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHh
Q 020064 260 NIDNIRHINATIVQGRYDVCCPMMSAWDLHKAW----PEADFKVVADAGHSANEPGIAAELVATNEKLKNL 326 (331)
Q Consensus 260 ~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 326 (331)
......++|++++||++|+++|.+.++...+.+ .+++++.+++.||.+.. +.++.+.+||++
T Consensus 149 ~~~~~~~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i~~-----~~~~~~~~~l~~ 214 (216)
T PF02230_consen 149 RPEALAKTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEISP-----EELRDLREFLEK 214 (216)
T ss_dssp CHCCCCTS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS--H-----HHHHHHHHHHHH
T ss_pred cccccCCCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCCCH-----HHHHHHHHHHhh
Confidence 111111489999999999999998888777766 35788999999999843 447778888875
|
; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A. |
| >PLN00021 chlorophyllase | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.5e-17 Score=130.42 Aligned_cols=104 Identities=13% Similarity=0.067 Sum_probs=70.5
Q ss_pred CCCCcEEEeccCCCCCC-CCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHH-------hCCCc
Q 020064 43 PTGHPVVFLHGGPGGGT-TPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQH-------LEIPE 114 (331)
Q Consensus 43 ~~~~~vl~~HG~~~~~~-~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~ 114 (331)
.+.|+|||+||++.+.. |......+.+.||.|+++|++|++.+.... ...+..++.+.+.+.++. .+.++
T Consensus 50 g~~PvVv~lHG~~~~~~~y~~l~~~Las~G~~VvapD~~g~~~~~~~~--~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~ 127 (313)
T PLN00021 50 GTYPVLLFLHGYLLYNSFYSQLLQHIASHGFIVVAPQLYTLAGPDGTD--EIKDAAAVINWLSSGLAAVLPEGVRPDLSK 127 (313)
T ss_pred CCCCEEEEECCCCCCcccHHHHHHHHHhCCCEEEEecCCCcCCCCchh--hHHHHHHHHHHHHhhhhhhcccccccChhh
Confidence 35688999999766544 445666777789999999999865432111 011122222223222222 23468
Q ss_pred EEEEEeChhHHHHHHHHHhCCC-----ceeeEEEecccc
Q 020064 115 WQVFGGSWGSTLALAYSLAHPD-----KVTGLVLRGIFL 148 (331)
Q Consensus 115 v~lvG~S~Gg~~a~~~a~~~p~-----~v~~li~~~~~~ 148 (331)
++++|||+||.+++.+|..+++ +++++|+++|..
T Consensus 128 v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~ 166 (313)
T PLN00021 128 LALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVD 166 (313)
T ss_pred eEEEEECcchHHHHHHHhhccccccccceeeEEeecccc
Confidence 9999999999999999998874 689999998753
|
|
| >COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.75 E-value=3.7e-17 Score=114.13 Aligned_cols=190 Identities=14% Similarity=0.120 Sum_probs=128.4
Q ss_pred eeEeCCC-ceEEEEeCCCCCCCcEEEeccC---CCCCC---CCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHH
Q 020064 26 ILKVSDI-HTIYWEQSGNPTGHPVVFLHGG---PGGGT---TPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWD 98 (331)
Q Consensus 26 ~~~~~~g-~~l~~~~~g~~~~~~vl~~HG~---~~~~~---~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~ 98 (331)
.++..-| ....|.....+..|..|++|-- +++.. ....+..+.+.||.++.+|+||.|.|....+..--..+|
T Consensus 8 ~i~Gp~G~le~~~~~~~~~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~GiGE~~D 87 (210)
T COG2945 8 IINGPAGRLEGRYEPAKTPAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDNGIGELED 87 (210)
T ss_pred EecCCcccceeccCCCCCCCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcccCCcchHHH
Confidence 4444444 1233433333456777888873 33322 245666677899999999999999999776433333444
Q ss_pred HHHHHHHHHHHhCCCcE-EEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccC
Q 020064 99 LIDDIEKLRQHLEIPEW-QVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLI 177 (331)
Q Consensus 99 ~~~~~~~~~~~~~~~~v-~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (331)
....+..+.+.....+. .+.|+|+|+++++.+|.+.|+ ....+.+.++....
T Consensus 88 a~aaldW~~~~hp~s~~~~l~GfSFGa~Ia~~la~r~~e-~~~~is~~p~~~~~-------------------------- 140 (210)
T COG2945 88 AAAALDWLQARHPDSASCWLAGFSFGAYIAMQLAMRRPE-ILVFISILPPINAY-------------------------- 140 (210)
T ss_pred HHHHHHHHHhhCCCchhhhhcccchHHHHHHHHHHhccc-ccceeeccCCCCch--------------------------
Confidence 44444444444443444 689999999999999999876 44555554432100
Q ss_pred CcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchh
Q 020064 178 PENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFL 257 (331)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (331)
+
T Consensus 141 ----------------------------------------------------------------------------d--- 141 (210)
T COG2945 141 ----------------------------------------------------------------------------D--- 141 (210)
T ss_pred ----------------------------------------------------------------------------h---
Confidence 0
Q ss_pred hhhccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHH
Q 020064 258 LDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKN 325 (331)
Q Consensus 258 ~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~ 325 (331)
...+.-. .+|.++|+|+.|.+++.....++++. ...+++++++++|+++.. -..+.+.|.+|+.
T Consensus 142 fs~l~P~-P~~~lvi~g~~Ddvv~l~~~l~~~~~-~~~~~i~i~~a~HFF~gK--l~~l~~~i~~~l~ 205 (210)
T COG2945 142 FSFLAPC-PSPGLVIQGDADDVVDLVAVLKWQES-IKITVITIPGADHFFHGK--LIELRDTIADFLE 205 (210)
T ss_pred hhhccCC-CCCceeEecChhhhhcHHHHHHhhcC-CCCceEEecCCCceeccc--HHHHHHHHHHHhh
Confidence 0012222 48999999999999998887777776 468899999999999766 6888999999984
|
|
| >PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway | Back alignment and domain information |
|---|
Probab=99.74 E-value=9.5e-18 Score=127.90 Aligned_cols=178 Identities=18% Similarity=0.128 Sum_probs=112.3
Q ss_pred CCCcEEEeccCCC-CCCCCCcccccCCCCcEEEEecCCCCCC-CCCCCCCCcc--------chHHHHHHHHHHHHHhC--
Q 020064 44 TGHPVVFLHGGPG-GGTTPSNRRFFDPDFYRIILFDQRGAGK-STPHACLDQN--------TTWDLIDDIEKLRQHLE-- 111 (331)
Q Consensus 44 ~~~~vl~~HG~~~-~~~~~~~~~~~~~~g~~vi~~D~~G~G~-s~~~~~~~~~--------~~~~~~~~~~~~~~~~~-- 111 (331)
+.|.||++|+..| .......+..++++||.|+++|+.+... .......... ..+...+++...++.+.
T Consensus 13 ~~~~Vvv~~d~~G~~~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~ 92 (218)
T PF01738_consen 13 PRPAVVVIHDIFGLNPNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYLRAQ 92 (218)
T ss_dssp SEEEEEEE-BTTBS-HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHHHCT
T ss_pred CCCEEEEEcCCCCCchHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHhc
Confidence 4678999999544 4444567788888999999999865443 1111100000 12345666666666552
Q ss_pred ----CCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHH
Q 020064 112 ----IPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVD 187 (331)
Q Consensus 112 ----~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (331)
.++|.++|+|+||.+++.++... ..++++|..-|....
T Consensus 93 ~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~~~------------------------------------- 134 (218)
T PF01738_consen 93 PEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGSPP------------------------------------- 134 (218)
T ss_dssp TTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SSSG-------------------------------------
T ss_pred cccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCCCC-------------------------------------
Confidence 35899999999999999999887 578888876651110
Q ss_pred hhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccc
Q 020064 188 AYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHI 267 (331)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~ 267 (331)
........++ ++
T Consensus 135 -------------------------------------------------------------------~~~~~~~~~~-~~ 146 (218)
T PF01738_consen 135 -------------------------------------------------------------------PPPLEDAPKI-KA 146 (218)
T ss_dssp -------------------------------------------------------------------GGHHHHGGG---S
T ss_pred -------------------------------------------------------------------Ccchhhhccc-CC
Confidence 0112234556 59
Q ss_pred cEEEEecCCCCccCCcchHHHHHhC----CCCcEEEecCCCCCCCcCC-------chhHHHHHHHHHHHhh
Q 020064 268 NATIVQGRYDVCCPMMSAWDLHKAW----PEADFKVVADAGHSANEPG-------IAAELVATNEKLKNLI 327 (331)
Q Consensus 268 P~l~i~G~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~~~-------~~~~~~~~i~~fl~~~ 327 (331)
|+++++|++|+.++.+..+.+.+.+ ...++++++|++|.+.... ..++..+.+.+|+++.
T Consensus 147 P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~~ 217 (218)
T PF01738_consen 147 PVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKRH 217 (218)
T ss_dssp -EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC-
T ss_pred CEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHhc
Confidence 9999999999999988777766665 5688999999999886532 2455667777777654
|
Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A. |
| >TIGR01840 esterase_phb esterase, PHB depolymerase family | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.1e-16 Score=121.37 Aligned_cols=106 Identities=15% Similarity=0.036 Sum_probs=71.0
Q ss_pred CCCcEEEeccCCCCCC-C---CCcccccCCCCcEEEEecCCCCCCCCCCCCC--------CccchHHHHHHHHHHHHHhC
Q 020064 44 TGHPVVFLHGGPGGGT-T---PSNRRFFDPDFYRIILFDQRGAGKSTPHACL--------DQNTTWDLIDDIEKLRQHLE 111 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~-~---~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~--------~~~~~~~~~~~~~~~~~~~~ 111 (331)
..|+||++||++++.. + +.+.....+.||.|+++|++|++.+...... ......++.+.+..+.+..+
T Consensus 12 ~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 91 (212)
T TIGR01840 12 PRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKANYS 91 (212)
T ss_pred CCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHhcC
Confidence 5688999999776533 2 1233334457999999999998754321100 01112233333333344433
Q ss_pred --CCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccc
Q 020064 112 --IPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLL 149 (331)
Q Consensus 112 --~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~ 149 (331)
.++++|+|||+||.+++.++..+|+.+.+++.+++...
T Consensus 92 id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~~ 131 (212)
T TIGR01840 92 IDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLPY 131 (212)
T ss_pred cChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCcc
Confidence 35899999999999999999999999999998887543
|
This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi. |
| >TIGR00976 /NonD putative hydrolase, CocE/NonD family | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.4e-16 Score=136.03 Aligned_cols=120 Identities=13% Similarity=0.055 Sum_probs=90.6
Q ss_pred EeCCCceEEEEeC---CCCCCCcEEEeccCCCCCC----C-CCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHH
Q 020064 28 KVSDIHTIYWEQS---GNPTGHPVVFLHGGPGGGT----T-PSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDL 99 (331)
Q Consensus 28 ~~~~g~~l~~~~~---g~~~~~~vl~~HG~~~~~~----~-~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~ 99 (331)
.+.||.+|++..+ +....|+||++||++.+.. + ......++++||.|+++|+||+|.|..... ... ...
T Consensus 2 ~~~DG~~L~~~~~~P~~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~--~~~-~~~ 78 (550)
T TIGR00976 2 PMRDGTRLAIDVYRPAGGGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFD--LLG-SDE 78 (550)
T ss_pred cCCCCCEEEEEEEecCCCCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceE--ecC-ccc
Confidence 4568888885444 3334578999999765432 2 224456778999999999999999986542 222 457
Q ss_pred HHHHHHHHHHhC-----CCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccch
Q 020064 100 IDDIEKLRQHLE-----IPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLR 150 (331)
Q Consensus 100 ~~~~~~~~~~~~-----~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~ 150 (331)
++|+.++++.+. ..+|.++|+|+||.+++.+|..+|++++++|..++....
T Consensus 79 ~~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d~ 134 (550)
T TIGR00976 79 AADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWDL 134 (550)
T ss_pred chHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccch
Confidence 777777777763 248999999999999999999999999999998876543
|
This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases. |
| >COG0400 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.3e-16 Score=117.17 Aligned_cols=175 Identities=17% Similarity=0.161 Sum_probs=114.2
Q ss_pred CCCCCCcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCC--CCCCC--CCCCCCcc-------chHHHHHHHHHHHHH
Q 020064 41 GNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRG--AGKST--PHACLDQN-------TTWDLIDDIEKLRQH 109 (331)
Q Consensus 41 g~~~~~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G--~G~s~--~~~~~~~~-------~~~~~~~~~~~~~~~ 109 (331)
+.+..|+||++||.+++....-........++.++.+.-+- .|.-. .......+ ..+.+++-+..+.+.
T Consensus 14 ~~p~~~~iilLHG~Ggde~~~~~~~~~~~P~~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~~ 93 (207)
T COG0400 14 GDPAAPLLILLHGLGGDELDLVPLPELILPNATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAEE 93 (207)
T ss_pred CCCCCcEEEEEecCCCChhhhhhhhhhcCCCCeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHHHH
Confidence 44566789999997666443222333333445555553221 11000 00000112 233445555555666
Q ss_pred hCC--CcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHH
Q 020064 110 LEI--PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVD 187 (331)
Q Consensus 110 ~~~--~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (331)
.+. ++++++|+|.||.+++.+..++|+.++++|+.++.......
T Consensus 94 ~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~~---------------------------------- 139 (207)
T COG0400 94 YGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEPE---------------------------------- 139 (207)
T ss_pred hCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCCc----------------------------------
Confidence 666 68999999999999999999999999999999986542100
Q ss_pred hhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccc
Q 020064 188 AYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHI 267 (331)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~ 267 (331)
.....+.+
T Consensus 140 ------------------------------------------------------------------------~~~~~~~~ 147 (207)
T COG0400 140 ------------------------------------------------------------------------LLPDLAGT 147 (207)
T ss_pred ------------------------------------------------------------------------cccccCCC
Confidence 01111169
Q ss_pred cEEEEecCCCCccCCcchHHHHHhC----CCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhh
Q 020064 268 NATIVQGRYDVCCPMMSAWDLHKAW----PEADFKVVADAGHSANEPGIAAELVATNEKLKNLI 327 (331)
Q Consensus 268 P~l~i~G~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 327 (331)
|+++++|+.|++||...+.++.+.+ -+++...++ .||.+..+. .+.+.+|+...
T Consensus 148 pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~-~GH~i~~e~-----~~~~~~wl~~~ 205 (207)
T COG0400 148 PILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWHE-GGHEIPPEE-----LEAARSWLANT 205 (207)
T ss_pred eEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEec-CCCcCCHHH-----HHHHHHHHHhc
Confidence 9999999999999998888888776 356778888 999985554 67777787653
|
|
| >TIGR03230 lipo_lipase lipoprotein lipase | Back alignment and domain information |
|---|
Probab=99.71 E-value=6.5e-17 Score=131.76 Aligned_cols=122 Identities=12% Similarity=-0.025 Sum_probs=86.3
Q ss_pred eeEeCCCceEEEEeCCCCCCCcEEEeccCCCCCCC--CC--cccccC--CCCcEEEEecCCCCCCCCCCCCCCccchHHH
Q 020064 26 ILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTT--PS--NRRFFD--PDFYRIILFDQRGAGKSTPHACLDQNTTWDL 99 (331)
Q Consensus 26 ~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~~--~~--~~~~~~--~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~ 99 (331)
++...+-..+.-..+. +++|++|++||+.++..+ |. +...+. ..+|+||++|++|+|.+..+.. ......+
T Consensus 23 ~l~~~~~~si~~s~Fn-~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a--~~~t~~v 99 (442)
T TIGR03230 23 YIVPGQPDSIADCNFN-HETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTS--AAYTKLV 99 (442)
T ss_pred EEecCChhhhhhcCcC-CCCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccc--cccHHHH
Confidence 4444443334333333 368999999998765432 21 233333 2469999999999998865432 2234566
Q ss_pred HHHHHHHHHHh------CCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccch
Q 020064 100 IDDIEKLRQHL------EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLR 150 (331)
Q Consensus 100 ~~~~~~~~~~~------~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~ 150 (331)
++++.++++.+ +.++++|+||||||.+|..++..+|++|.++++++|+.+.
T Consensus 100 g~~la~lI~~L~~~~gl~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP~ 156 (442)
T TIGR03230 100 GKDVAKFVNWMQEEFNYPWDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGPT 156 (442)
T ss_pred HHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCCc
Confidence 77777777754 3679999999999999999999999999999999997643
|
Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity. |
| >PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate [] | Back alignment and domain information |
|---|
Probab=99.70 E-value=3.4e-16 Score=124.92 Aligned_cols=232 Identities=13% Similarity=0.110 Sum_probs=120.9
Q ss_pred CccceeEeCCCceEE-EEeCCCCCC-CcEEEeccCCCCC--CCCCc-ccccCCCCcEEEEecCCCCCCCCCCCCCCccch
Q 020064 22 YSTGILKVSDIHTIY-WEQSGNPTG-HPVVFLHGGPGGG--TTPSN-RRFFDPDFYRIILFDQRGAGKSTPHACLDQNTT 96 (331)
Q Consensus 22 ~~~~~~~~~~g~~l~-~~~~g~~~~-~~vl~~HG~~~~~--~~~~~-~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~ 96 (331)
.++-.|...++ +|. |....+.++ .|+|++-||..+- .++.. ...+...|+.++++|.||.|.|....- ..+.
T Consensus 165 i~~v~iP~eg~-~I~g~LhlP~~~~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l--~~D~ 241 (411)
T PF06500_consen 165 IEEVEIPFEGK-TIPGYLHLPSGEKPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPL--TQDS 241 (411)
T ss_dssp EEEEEEEETTC-EEEEEEEESSSSS-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S---S-C
T ss_pred cEEEEEeeCCc-EEEEEEEcCCCCCCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCC--CcCH
Confidence 44555666664 443 322222222 2455555554442 33333 355677999999999999999864331 1223
Q ss_pred HHHHHHHHHHHHHh---CCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhh
Q 020064 97 WDLIDDIEKLRQHL---EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESF 173 (331)
Q Consensus 97 ~~~~~~~~~~~~~~---~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (331)
+.+...+.+.+... +..+|.++|.|+||.+|.++|..+++|++++|..+++....-...+.
T Consensus 242 ~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~ft~~~~---------------- 305 (411)
T PF06500_consen 242 SRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHHFFTDPEW---------------- 305 (411)
T ss_dssp CHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SCGGH-HHH----------------
T ss_pred HHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHhhhhccHHH----------------
Confidence 34444444444443 44589999999999999999999989999999999875432110000
Q ss_pred hccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCC
Q 020064 174 RDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPS 253 (331)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (331)
....+... ...+..++..... +.+. +...+.
T Consensus 306 ~~~~P~my----~d~LA~rlG~~~~----------------------~~~~--------l~~el~--------------- 336 (411)
T PF06500_consen 306 QQRVPDMY----LDVLASRLGMAAV----------------------SDES--------LRGELN--------------- 336 (411)
T ss_dssp HTTS-HHH----HHHHHHHCT-SCE-----------------------HHH--------HHHHGG---------------
T ss_pred HhcCCHHH----HHHHHHHhCCccC----------------------CHHH--------HHHHHH---------------
Confidence 01111111 1111111111100 0000 000000
Q ss_pred cchhh--hhc--cccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCC-CCCCcCCchhHHHHHHHHHHHhh
Q 020064 254 DSFLL--DNI--DNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAG-HSANEPGIAAELVATNEKLKNLI 327 (331)
Q Consensus 254 ~~~~~--~~l--~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~g-H~~~~~~~~~~~~~~i~~fl~~~ 327 (331)
.+.+. ..| .+. .+|+|.++|++|+++|.+..+-++..-.+.+...++... |.- -+..+..+.+||+..
T Consensus 337 ~~SLk~qGlL~~rr~-~~plL~i~~~~D~v~P~eD~~lia~~s~~gk~~~~~~~~~~~g-----y~~al~~~~~Wl~~~ 409 (411)
T PF06500_consen 337 KFSLKTQGLLSGRRC-PTPLLAINGEDDPVSPIEDSRLIAESSTDGKALRIPSKPLHMG-----YPQALDEIYKWLEDK 409 (411)
T ss_dssp GGSTTTTTTTTSS-B-SS-EEEEEETT-SSS-HHHHHHHHHTBTT-EEEEE-SSSHHHH-----HHHHHHHHHHHHHHH
T ss_pred hcCcchhccccCCCC-CcceEEeecCCCCCCCHHHHHHHHhcCCCCceeecCCCccccc-----hHHHHHHHHHHHHHh
Confidence 11111 123 455 599999999999999999999888887778888887554 332 445677788888653
|
This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C. |
| >TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.9e-16 Score=126.63 Aligned_cols=296 Identities=12% Similarity=0.012 Sum_probs=157.8
Q ss_pred CCccceeEeCCCceE-EEEeCCCCC---CCcEEEeccCCCCCC--CCCcccccCCCCcEEEEecCCCCCCCCCCCCCCcc
Q 020064 21 PYSTGILKVSDIHTI-YWEQSGNPT---GHPVVFLHGGPGGGT--TPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQN 94 (331)
Q Consensus 21 ~~~~~~~~~~~g~~l-~~~~~g~~~---~~~vl~~HG~~~~~~--~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~ 94 (331)
+.++..+-..+-.+| +|....... .|+||++....+... ....++.++. |+.|+..|+..-+..+... ...
T Consensus 74 ~v~e~vV~~~~~~~L~~y~~~~~~~~~~~~pvLiV~Pl~g~~~~L~RS~V~~Ll~-g~dVYl~DW~~p~~vp~~~--~~f 150 (406)
T TIGR01849 74 PIRERVVWDKPFCRLIHFKRQGFRAELPGPAVLIVAPMSGHYATLLRSTVEALLP-DHDVYITDWVNARMVPLSA--GKF 150 (406)
T ss_pred eeEEEEEEECCCeEEEEECCCCcccccCCCcEEEEcCCchHHHHHHHHHHHHHhC-CCcEEEEeCCCCCCCchhc--CCC
Confidence 334444444444344 443332211 378999998765422 2567788888 9999999998877554333 357
Q ss_pred chHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhC-----CCceeeEEEeccccchhhhhhhHhhcccccCChhh
Q 020064 95 TTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAH-----PDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDA 169 (331)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~-----p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (331)
+++++++-+.++++.+|.+ ++++|+|+||..++.+++.+ |.+++.+++++++................ ...+.
T Consensus 151 ~ldDYi~~l~~~i~~~G~~-v~l~GvCqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~~p~~v~~~a~~-~~i~~ 228 (406)
T TIGR01849 151 DLEDYIDYLIEFIRFLGPD-IHVIAVCQPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDARASPTVVNELARE-KPIEW 228 (406)
T ss_pred CHHHHHHHHHHHHHHhCCC-CcEEEEchhhHHHHHHHHHHHhcCCCCCcceEEEEecCccCCCCCchHHHHhhc-ccHHH
Confidence 8999999999999999877 99999999999988777665 66799999999887754321110000000 00000
Q ss_pred HH-hhhccCCcc----h---h-hhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhh----h--cCCccHHH
Q 020064 170 WE-SFRDLIPEN----E---R-SCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENI----K--RGEDDIFS 234 (331)
Q Consensus 170 ~~-~~~~~~~~~----~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~--~~~~~~~~ 234 (331)
+. .....++.. . . ..+...-+..+........ -|..+.............. . ....+.-.
T Consensus 229 ~~~~~i~~vp~~~~g~gr~v~PG~~~~~~F~~mnp~r~~~~-----~~~~~~~l~~gd~~~~~~~~~f~~~y~d~~dlpg 303 (406)
T TIGR01849 229 FQHNVIMRVPFPYPGAGRLVYPGFLQLAGFISMNLDRHTKA-----HSDFFLHLVKGDGQEADKHRIFYDEYLAVMDMTA 303 (406)
T ss_pred HHHHhhhccCccccCCCCcccCHHHHHHHHHHcCcchHHHH-----HHHHHHHHhcCCcchHHHHHHHHHHhhhccCCcH
Confidence 00 000000000 0 0 0000000000010000000 0000000000000000000 0 00000011
Q ss_pred HHHhhhhhhhhhccCCCCCcch---hhhhccccccccEEEEecCCCCccCCcchHHHHHhC---C--CCcEEEecCCCCC
Q 020064 235 LAFARIENHYFLNKGFFPSDSF---LLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAW---P--EADFKVVADAGHS 306 (331)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~---~--~~~~~~~~~~gH~ 306 (331)
..+...-...|....+...... ..-.+++|+++|+|.+.|++|.++|+..++.+.+.+ + +.+.++.+++||.
T Consensus 304 e~y~~~v~~vf~~n~L~~G~l~v~G~~Vdl~~I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~ 383 (406)
T TIGR01849 304 EFYLQTIDVVFQQFLLPQGKFIVEGKRVDPGAITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHY 383 (406)
T ss_pred HHHHHHHHHHHHhCCccCCcEEECCEEecHHHCcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeE
Confidence 1111122222222222221221 223788883399999999999999999999998874 4 3557777789998
Q ss_pred CCc--CCchhHHHHHHHHHHHh
Q 020064 307 ANE--PGIAAELVATNEKLKNL 326 (331)
Q Consensus 307 ~~~--~~~~~~~~~~i~~fl~~ 326 (331)
-.. ....+++...|.+||.+
T Consensus 384 Gvf~G~r~~~~i~P~i~~wl~~ 405 (406)
T TIGR01849 384 GVFSGSRFREEIYPLVREFIRR 405 (406)
T ss_pred EEeeChhhhhhhchHHHHHHHh
Confidence 643 34578899999999875
|
This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some |
| >PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.7e-16 Score=114.15 Aligned_cols=154 Identities=18% Similarity=0.193 Sum_probs=101.8
Q ss_pred EEEeccCCCC--CCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCcEEEEEeChhHH
Q 020064 48 VVFLHGGPGG--GTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGST 125 (331)
Q Consensus 48 vl~~HG~~~~--~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~ 125 (331)
|+++||+.++ ..|..+...-++.-++|-.+|+ + ..+.+++.+.+.+.+..++ +++++||||+||.
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~~~V~~~~~------~------~P~~~~W~~~l~~~i~~~~-~~~ilVaHSLGc~ 67 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENSVRVEQPDW------D------NPDLDEWVQALDQAIDAID-EPTILVAHSLGCL 67 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTSEEEEEC--------T------S--HHHHHHHHHHCCHC-T-TTEEEEEETHHHH
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCCeEEecccc------C------CCCHHHHHHHHHHHHhhcC-CCeEEEEeCHHHH
Confidence 6899996665 4565555544444488888776 1 2357788888888777765 5799999999999
Q ss_pred HHHHHH-HhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhccccCCCchHHHHHH
Q 020064 126 LALAYS-LAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAA 204 (331)
Q Consensus 126 ~a~~~a-~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (331)
.++.++ .....+|+|+++++|+...... ...+
T Consensus 68 ~~l~~l~~~~~~~v~g~lLVAp~~~~~~~---------------------~~~~-------------------------- 100 (171)
T PF06821_consen 68 TALRWLAEQSQKKVAGALLVAPFDPDDPE---------------------PFPP-------------------------- 100 (171)
T ss_dssp HHHHHHHHTCCSSEEEEEEES--SCGCHH---------------------CCTC--------------------------
T ss_pred HHHHHHhhcccccccEEEEEcCCCccccc---------------------chhh--------------------------
Confidence 999999 7778899999999987532000 0000
Q ss_pred HHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCCCccCCcc
Q 020064 205 ARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMS 284 (331)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~ 284 (331)
.. ..........+ .+|.++|.+++|+++|.+.
T Consensus 101 -------------------~~----------------------------~~f~~~p~~~l-~~~~~viaS~nDp~vp~~~ 132 (171)
T PF06821_consen 101 -------------------EL----------------------------DGFTPLPRDPL-PFPSIVIASDNDPYVPFER 132 (171)
T ss_dssp -------------------GG----------------------------CCCTTSHCCHH-HCCEEEEEETTBSSS-HHH
T ss_pred -------------------hc----------------------------cccccCccccc-CCCeEEEEcCCCCccCHHH
Confidence 00 00000112234 4888999999999999999
Q ss_pred hHHHHHhCCCCcEEEecCCCCCCCcC
Q 020064 285 AWDLHKAWPEADFKVVADAGHSANEP 310 (331)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~gH~~~~~ 310 (331)
++++++.+ +++++.++++||+...+
T Consensus 133 a~~~A~~l-~a~~~~~~~~GHf~~~~ 157 (171)
T PF06821_consen 133 AQRLAQRL-GAELIILGGGGHFNAAS 157 (171)
T ss_dssp HHHHHHHH-T-EEEEETS-TTSSGGG
T ss_pred HHHHHHHc-CCCeEECCCCCCccccc
Confidence 99999998 89999999999998654
|
The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A. |
| >cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.5e-16 Score=124.43 Aligned_cols=125 Identities=15% Similarity=0.092 Sum_probs=86.5
Q ss_pred ccceeEeCCCceEEEEeCCCCCCCcEEEeccCCCCC-C-CCC-cccccC-CCCcEEEEecCCCCCCCCCCCCCCccchHH
Q 020064 23 STGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGG-T-TPS-NRRFFD-PDFYRIILFDQRGAGKSTPHACLDQNTTWD 98 (331)
Q Consensus 23 ~~~~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~-~-~~~-~~~~~~-~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~ 98 (331)
..+.+...++..+.+....+ ++|++|++||+.++. . |.. ....++ ..+|+|+++|+++++.+.... ...+...
T Consensus 15 ~~~~~~~~~~~~~~~~~f~~-~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~--a~~~~~~ 91 (275)
T cd00707 15 CPQLLFADDPSSLKNSNFNP-SRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQ--AVNNTRV 91 (275)
T ss_pred CceEecCCChhhhhhcCCCC-CCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHH--HHHhHHH
Confidence 34455554555666665554 688999999987765 2 322 233344 468999999999984332111 1234445
Q ss_pred HHHHHHHHHHHh------CCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccch
Q 020064 99 LIDDIEKLRQHL------EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLR 150 (331)
Q Consensus 99 ~~~~~~~~~~~~------~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~ 150 (331)
+++++..+++.+ +.++++++||||||.++..++.++|+++.++++++|+.+.
T Consensus 92 v~~~la~~l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p~ 149 (275)
T cd00707 92 VGAELAKFLDFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGPL 149 (275)
T ss_pred HHHHHHHHHHHHHHhcCCChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCccc
Confidence 555666555543 4568999999999999999999999999999999987543
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.67 E-value=6e-15 Score=112.29 Aligned_cols=178 Identities=18% Similarity=0.105 Sum_probs=130.0
Q ss_pred CCcEEEecc-CCCCCCCCCcccccCCCCcEEEEecCCCC-CCCCCCCCC----C-----ccchHHHHHHHHHHHHHhC--
Q 020064 45 GHPVVFLHG-GPGGGTTPSNRRFFDPDFYRIILFDQRGA-GKSTPHACL----D-----QNTTWDLIDDIEKLRQHLE-- 111 (331)
Q Consensus 45 ~~~vl~~HG-~~~~~~~~~~~~~~~~~g~~vi~~D~~G~-G~s~~~~~~----~-----~~~~~~~~~~~~~~~~~~~-- 111 (331)
.|.||++|+ ++-+.........++..||.|+++|+-+. |.+...... . ..+..+...|+.+.++.+.
T Consensus 27 ~P~VIv~hei~Gl~~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~ 106 (236)
T COG0412 27 FPGVIVLHEIFGLNPHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYLARQ 106 (236)
T ss_pred CCEEEEEecccCCchHHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHHHHHhC
Confidence 378999999 55567778899999999999999999873 333222100 0 1223567778888777763
Q ss_pred ----CCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHH
Q 020064 112 ----IPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVD 187 (331)
Q Consensus 112 ----~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (331)
.++|.++|+||||.+++.++...| .+++.+..-+.....
T Consensus 107 ~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~~~------------------------------------ 149 (236)
T COG0412 107 PQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLIAD------------------------------------ 149 (236)
T ss_pred CCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCCCC------------------------------------
Confidence 457999999999999999999988 688888766533210
Q ss_pred hhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccc
Q 020064 188 AYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHI 267 (331)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~ 267 (331)
......++ ++
T Consensus 150 ---------------------------------------------------------------------~~~~~~~~-~~ 159 (236)
T COG0412 150 ---------------------------------------------------------------------DTADAPKI-KV 159 (236)
T ss_pred ---------------------------------------------------------------------cccccccc-cC
Confidence 00113456 59
Q ss_pred cEEEEecCCCCccCCcchHHHHHhCC----CCcEEEecCCCCCCCcC----------CchhHHHHHHHHHHHhhhc
Q 020064 268 NATIVQGRYDVCCPMMSAWDLHKAWP----EADFKVVADAGHSANEP----------GIAAELVATNEKLKNLIKN 329 (331)
Q Consensus 268 P~l~i~G~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~~----------~~~~~~~~~i~~fl~~~~~ 329 (331)
|+|+++|+.|..+|.+....+.+.+. +.++.+++++.|.+..+ ...+...+.+.+|+++...
T Consensus 160 pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~~~ 235 (236)
T COG0412 160 PVLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRLLG 235 (236)
T ss_pred cEEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEeCCCccccccCCCcccccCCHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999887777777762 57789999999988743 1355677788888887653
|
|
| >PRK10162 acetyl esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=6e-15 Score=118.50 Aligned_cols=122 Identities=17% Similarity=0.078 Sum_probs=76.5
Q ss_pred CccceeEeCCCceEEEEeC--CCCCCCcEEEeccCCC---CC-CCCCcccccCC-CCcEEEEecCCCCCCCCCCCCCCcc
Q 020064 22 YSTGILKVSDIHTIYWEQS--GNPTGHPVVFLHGGPG---GG-TTPSNRRFFDP-DFYRIILFDQRGAGKSTPHACLDQN 94 (331)
Q Consensus 22 ~~~~~~~~~~g~~l~~~~~--g~~~~~~vl~~HG~~~---~~-~~~~~~~~~~~-~g~~vi~~D~~G~G~s~~~~~~~~~ 94 (331)
.+...+...+| .+..+.+ .....|+||++|||+. +. .+......++. .|+.|+++|+|.......+ .
T Consensus 57 ~~~~~i~~~~g-~i~~~~y~P~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~~~p-----~ 130 (318)
T PRK10162 57 TRAYMVPTPYG-QVETRLYYPQPDSQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEARFP-----Q 130 (318)
T ss_pred EEEEEEecCCC-ceEEEEECCCCCCCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCCCCC-----C
Confidence 33445555566 3333322 2224578999999663 22 23334455544 5999999999975443222 2
Q ss_pred chHHHHHHHHHH---HHHhCC--CcEEEEEeChhHHHHHHHHHhC------CCceeeEEEeccccc
Q 020064 95 TTWDLIDDIEKL---RQHLEI--PEWQVFGGSWGSTLALAYSLAH------PDKVTGLVLRGIFLL 149 (331)
Q Consensus 95 ~~~~~~~~~~~~---~~~~~~--~~v~lvG~S~Gg~~a~~~a~~~------p~~v~~li~~~~~~~ 149 (331)
..++..+.+..+ .+.++. ++++|+|+|+||.+++.++... +.++++++++.|...
T Consensus 131 ~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~ 196 (318)
T PRK10162 131 AIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYG 196 (318)
T ss_pred cHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccC
Confidence 344444443333 445554 5899999999999999998753 357889999887543
|
|
| >PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins | Back alignment and domain information |
|---|
Probab=99.66 E-value=3.8e-15 Score=118.18 Aligned_cols=232 Identities=19% Similarity=0.173 Sum_probs=121.3
Q ss_pred ceeEeCCCceEEEE---eC-CCCCCCcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCC-----------
Q 020064 25 GILKVSDIHTIYWE---QS-GNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHA----------- 89 (331)
Q Consensus 25 ~~~~~~~g~~l~~~---~~-g~~~~~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~----------- 89 (331)
-.++..+|..++-+ .. +..+-|.||.+||.++....+.....+...||.|+++|.||+|......
T Consensus 59 v~f~s~~g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~~~~~~~~~a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~ 138 (320)
T PF05448_consen 59 VSFESFDGSRVYGWLYRPKNAKGKLPAVVQFHGYGGRSGDPFDLLPWAAAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGH 138 (320)
T ss_dssp EEEEEGGGEEEEEEEEEES-SSSSEEEEEEE--TT--GGGHHHHHHHHHTT-EEEEE--TTTSSSS-B-SSBSSS-SSSS
T ss_pred EEEEccCCCEEEEEEEecCCCCCCcCEEEEecCCCCCCCCcccccccccCCeEEEEecCCCCCCCCCCccccCCCCCccH
Confidence 34555566666532 22 2223467999999665533332233456799999999999999322110
Q ss_pred ------C-CCccchHHHHHHHHHHHHHh------CCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhh
Q 020064 90 ------C-LDQNTTWDLIDDIEKLRQHL------EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDW 156 (331)
Q Consensus 90 ------~-~~~~~~~~~~~~~~~~~~~~------~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~ 156 (331)
+ ...+-+..+..|....++.+ +.++|.+.|.|+||.+++.+|+..+ +|++++...|........
T Consensus 139 ~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~vP~l~d~~~~-- 215 (320)
T PF05448_consen 139 ITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAADVPFLCDFRRA-- 215 (320)
T ss_dssp TTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEESESSSSHHHH--
T ss_pred HhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEecCCCccchhhh--
Confidence 0 11122233445555444443 3458999999999999999999986 699999888755422110
Q ss_pred HhhcccccCChhhHHhhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHH
Q 020064 157 FYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLA 236 (331)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (331)
+.......+... +..+....... .......
T Consensus 216 -------------~~~~~~~~~y~~----~~~~~~~~d~~---------------------------------~~~~~~v 245 (320)
T PF05448_consen 216 -------------LELRADEGPYPE----IRRYFRWRDPH---------------------------------HEREPEV 245 (320)
T ss_dssp -------------HHHT--STTTHH----HHHHHHHHSCT---------------------------------HCHHHHH
T ss_pred -------------hhcCCccccHHH----HHHHHhccCCC---------------------------------cccHHHH
Confidence 000000000000 00000000000 0000001
Q ss_pred HhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCC-CCcEEEecCCCCCCCcCCchhH
Q 020064 237 FARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWP-EADFKVVADAGHSANEPGIAAE 315 (331)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~~~~~ 315 (331)
+..+. ..|......+| +||+++-.|-.|.+|||...-...+.++ .+++.++|..||....+ .
T Consensus 246 ~~~L~------------Y~D~~nfA~ri-~~pvl~~~gl~D~~cPP~t~fA~yN~i~~~K~l~vyp~~~He~~~~----~ 308 (320)
T PF05448_consen 246 FETLS------------YFDAVNFARRI-KCPVLFSVGLQDPVCPPSTQFAAYNAIPGPKELVVYPEYGHEYGPE----F 308 (320)
T ss_dssp HHHHH------------TT-HHHHGGG---SEEEEEEETT-SSS-HHHHHHHHCC--SSEEEEEETT--SSTTHH----H
T ss_pred HHHHh------------hhhHHHHHHHc-CCCEEEEEecCCCCCCchhHHHHHhccCCCeeEEeccCcCCCchhh----H
Confidence 11110 34566677888 5999999999999999999999999885 57899999999987322 2
Q ss_pred HHHHHHHHHHh
Q 020064 316 LVATNEKLKNL 326 (331)
Q Consensus 316 ~~~~i~~fl~~ 326 (331)
-.+...+||.+
T Consensus 309 ~~~~~~~~l~~ 319 (320)
T PF05448_consen 309 QEDKQLNFLKE 319 (320)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhc
Confidence 25666677654
|
Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F .... |
| >KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.66 E-value=5.3e-15 Score=119.09 Aligned_cols=310 Identities=12% Similarity=0.055 Sum_probs=165.9
Q ss_pred CCCCCccceeEeCCCceEEEEeC--CCCCCCcEEEeccCCCCCCCCC-------cccccCCCCcEEEEecCCCCCCCCCC
Q 020064 18 YVEPYSTGILKVSDIHTIYWEQS--GNPTGHPVVFLHGGPGGGTTPS-------NRRFFDPDFYRIILFDQRGAGKSTPH 88 (331)
Q Consensus 18 ~~~~~~~~~~~~~~g~~l~~~~~--g~~~~~~vl~~HG~~~~~~~~~-------~~~~~~~~g~~vi~~D~~G~G~s~~~ 88 (331)
...+.+++.+++.||..+..... +..++|+|++.||...++..|- +.-.++.+||.|+.-+.||--.|...
T Consensus 44 ~gy~~E~h~V~T~DgYiL~lhRIp~~~~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h 123 (403)
T KOG2624|consen 44 YGYPVEEHEVTTEDGYILTLHRIPRGKKKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKH 123 (403)
T ss_pred cCCceEEEEEEccCCeEEEEeeecCCCCCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccchhh
Confidence 34678999999999985544332 3246789999999655544332 22224569999999999997666422
Q ss_pred C--------CCCccchHH-----HHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCC---ceeeEEEeccccchhh
Q 020064 89 A--------CLDQNTTWD-----LIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPD---KVTGLVLRGIFLLRKK 152 (331)
Q Consensus 89 ~--------~~~~~~~~~-----~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~---~v~~li~~~~~~~~~~ 152 (331)
. .....++++ +.+.|..+++.-+.++++.+|||.|+...+..+...|+ +|+..++++|......
T Consensus 124 ~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~~~k~ 203 (403)
T KOG2624|consen 124 KKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAAFPKH 203 (403)
T ss_pred cccCCcCCcceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecchhhhcc
Confidence 1 123345554 44455555666678899999999999999999998876 7999999999885431
Q ss_pred hhhhHhhcccccC-ChhhHHhhhccCCcchhhhhHHhhccccCCCchHHHHHHHH---HhhhHHHhh---h----cCCCC
Q 020064 153 EIDWFYEGGAAAI-YPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAAR---AWTKWEMMT---A----HLLPN 221 (331)
Q Consensus 153 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~---~----~~~~~ 221 (331)
............. ....+..+.....-.....+.+.+...+............. .+..+.... . .....
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~fg~~~f~p~~~~~~~~~~~~C~~~~~~~~lC~~~~~~~~G~~~~~~n~~~~~~~~~h~ 283 (403)
T KOG2624|consen 204 IKSLLNKFLDPFLGAFSLLPLLFGRKEFLPSNLFIKKFARKICSGSKIFADLCSNFLFLLVGWNSNNWNTTLLPVYLAHL 283 (403)
T ss_pred cccHHHHhhhhhhhhhhHHHHhcCCccccchhhHHHHHHHHHhcchhHHHHHHHHHHHHHcCcchHhhhhcccchhhccC
Confidence 1111000000000 00011111111111111122222222222211111100000 000000000 0 00001
Q ss_pred hhhhhcCCccHHHHHHhhhhhhhhh-----ccCCCCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCCCCc
Q 020064 222 EENIKRGEDDIFSLAFARIENHYFL-----NKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEAD 296 (331)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~ 296 (331)
+..........+.+.........|- +...........-.+.++ ++|+.+.+|++|.++.+++.+.+....+++.
T Consensus 284 pagtSvk~~~H~~Q~~~s~~f~~yD~G~~~N~~~Y~q~~pP~Y~l~~i-~~P~~l~~g~~D~l~~~~DV~~~~~~~~~~~ 362 (403)
T KOG2624|consen 284 PAGTSVKNIVHWAQIVRSGKFRKYDYGSKRNLKHYGQSTPPEYDLTNI-KVPTALYYGDNDWLADPEDVLILLLVLPNSV 362 (403)
T ss_pred CCCccHHHHHHHHHHhcCCCccccCCCccccHhhcCCCCCCCCCcccc-ccCEEEEecCCcccCCHHHHHHHHHhccccc
Confidence 1111111111222222221111110 111111122233367888 6999999999999999999998888887655
Q ss_pred EEE---ecCCCCCCC--cCCchhHHHHHHHHHHHhhh
Q 020064 297 FKV---VADAGHSAN--EPGIAAELVATNEKLKNLIK 328 (331)
Q Consensus 297 ~~~---~~~~gH~~~--~~~~~~~~~~~i~~fl~~~~ 328 (331)
... +++-.|+-+ -...++++.+.|.+.++...
T Consensus 363 ~~~~~~~~~ynHlDFi~g~da~~~vy~~vi~~~~~~~ 399 (403)
T KOG2624|consen 363 IKYIVPIPEYNHLDFIWGLDAKEEVYDPVIERLRLFE 399 (403)
T ss_pred ccccccCCCccceeeeeccCcHHHHHHHHHHHHHhhh
Confidence 533 788899653 33358999999999887654
|
|
| >PRK10115 protease 2; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.4e-14 Score=127.21 Aligned_cols=130 Identities=16% Similarity=0.074 Sum_probs=94.7
Q ss_pred CCccceeEeCCCceEEEE-eC-----CCCCCCcEEEeccCCCCCC---CCCcccccCCCCcEEEEecCCCCCCCCC---C
Q 020064 21 PYSTGILKVSDIHTIYWE-QS-----GNPTGHPVVFLHGGPGGGT---TPSNRRFFDPDFYRIILFDQRGAGKSTP---H 88 (331)
Q Consensus 21 ~~~~~~~~~~~g~~l~~~-~~-----g~~~~~~vl~~HG~~~~~~---~~~~~~~~~~~g~~vi~~D~~G~G~s~~---~ 88 (331)
..+..+++..||.+|.+. .. ...+.|+||++||+.+... +......++++||.|+.++.||-|.=.. .
T Consensus 415 ~~e~v~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~~ 494 (686)
T PRK10115 415 RSEHLWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYE 494 (686)
T ss_pred EEEEEEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHHHH
Confidence 445566788999887752 21 1224588999999776543 4444566788999999999998654331 1
Q ss_pred ---CCCCccchHHHHHHHHHHHHHh--CCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccch
Q 020064 89 ---ACLDQNTTWDLIDDIEKLRQHL--EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLR 150 (331)
Q Consensus 89 ---~~~~~~~~~~~~~~~~~~~~~~--~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~ 150 (331)
......+++|+++.+..+++.= ..+++.+.|.|.||+++..++.++|++++++|...|....
T Consensus 495 ~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D~ 561 (686)
T PRK10115 495 DGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDV 561 (686)
T ss_pred hhhhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchhH
Confidence 0112357778888777777652 3468999999999999999999999999999999886653
|
|
| >TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II | Back alignment and domain information |
|---|
Probab=99.65 E-value=4.2e-15 Score=123.46 Aligned_cols=103 Identities=12% Similarity=0.090 Sum_probs=80.5
Q ss_pred CCCcEEEeccCCCCCCC------CCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHh----CCC
Q 020064 44 TGHPVVFLHGGPGGGTT------PSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHL----EIP 113 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~~------~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 113 (331)
.+.|||+++.+-+.... ..+++.++++||.|+++|+++-+.+.. ..+++++++.+.+.++.+ |.+
T Consensus 214 ~~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~r-----~~~ldDYv~~i~~Ald~V~~~tG~~ 288 (560)
T TIGR01839 214 HARPLLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAHR-----EWGLSTYVDALKEAVDAVRAITGSR 288 (560)
T ss_pred CCCcEEEechhhhhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhhc-----CCCHHHHHHHHHHHHHHHHHhcCCC
Confidence 45789999997765443 346777889999999999998766642 356777776666555554 678
Q ss_pred cEEEEEeChhHHHHHH----HHHhCCC-ceeeEEEeccccchh
Q 020064 114 EWQVFGGSWGSTLALA----YSLAHPD-KVTGLVLRGIFLLRK 151 (331)
Q Consensus 114 ~v~lvG~S~Gg~~a~~----~a~~~p~-~v~~li~~~~~~~~~ 151 (331)
++.++|+|+||.++.. +++++++ +|+.++++.++....
T Consensus 289 ~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~ 331 (560)
T TIGR01839 289 DLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDST 331 (560)
T ss_pred CeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccC
Confidence 9999999999999997 7888886 799999998877643
|
This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >COG4757 Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.5e-15 Score=109.23 Aligned_cols=257 Identities=14% Similarity=0.053 Sum_probs=146.6
Q ss_pred ceeEeCCCceEEEEeCCCCC-CCcEEEeccCCC--CCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCC-CccchHHHH
Q 020064 25 GILKVSDIHTIYWEQSGNPT-GHPVVFLHGGPG--GGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACL-DQNTTWDLI 100 (331)
Q Consensus 25 ~~~~~~~g~~l~~~~~g~~~-~~~vl~~HG~~~--~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~-~~~~~~~~~ 100 (331)
..+...||..+....+...+ .+-.|++.|..+ ...+..++....++||.|+.+|+||.|.|...... ..+.+.|++
T Consensus 8 ~~l~~~DG~~l~~~~~pA~~~~~g~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~DwA 87 (281)
T COG4757 8 AHLPAPDGYSLPGQRFPADGKASGRLVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLDWA 87 (281)
T ss_pred cccccCCCccCccccccCCCCCCCcEEecccCCcchhHhHHHHHHhhccCceEEEEecccccCCCccccccCccchhhhh
Confidence 45677788777666555322 232455556433 34456677888889999999999999999865421 235555654
Q ss_pred H-HHHHHHHHh----CCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHh-hh
Q 020064 101 D-DIEKLRQHL----EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWES-FR 174 (331)
Q Consensus 101 ~-~~~~~~~~~----~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 174 (331)
. |+...++.+ ...+...||||+||.+.-.+. +++ +..+....+........ +... ..+.. ..
T Consensus 88 ~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~gL~~-~~~-k~~a~~vfG~gagwsg~---m~~~-------~~l~~~~l 155 (281)
T COG4757 88 RLDFPAALAALKKALPGHPLYFVGHSFGGQALGLLG-QHP-KYAAFAVFGSGAGWSGW---MGLR-------ERLGAVLL 155 (281)
T ss_pred hcchHHHHHHHHhhCCCCceEEeeccccceeecccc-cCc-ccceeeEeccccccccc---hhhh-------hcccceee
Confidence 4 555555544 445899999999998665544 445 55555555543332111 1000 00000 00
Q ss_pred ccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCc
Q 020064 175 DLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSD 254 (331)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (331)
..+.......+...+...+............+.|.+|.........++. .
T Consensus 156 ~~lv~p~lt~w~g~~p~~l~G~G~d~p~~v~RdW~RwcR~p~y~fddp~------------------------------~ 205 (281)
T COG4757 156 WNLVGPPLTFWKGYMPKDLLGLGSDLPGTVMRDWARWCRHPRYYFDDPA------------------------------M 205 (281)
T ss_pred ccccccchhhccccCcHhhcCCCccCcchHHHHHHHHhcCccccccChh------------------------------H
Confidence 0000000111111111111111112223344555555544433333322 2
Q ss_pred chhhhhccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEE--EecC----CCCCCCcCCchhHHHHHHHHHH
Q 020064 255 SFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFK--VVAD----AGHSANEPGIAAELVATNEKLK 324 (331)
Q Consensus 255 ~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~--~~~~----~gH~~~~~~~~~~~~~~i~~fl 324 (331)
....+...++ .+||+.+...+|+.+|+...+.+.+.++|+.+. .++. -||+-..-+..|.+.+.+.+|+
T Consensus 206 ~~~~q~yaaV-rtPi~~~~~~DD~w~P~As~d~f~~~y~nApl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 206 RNYRQVYAAV-RTPITFSRALDDPWAPPASRDAFASFYRNAPLEMRDLPRAEGPLGHMGYFREPFEALWKEMLGWF 280 (281)
T ss_pred hHHHHHHHHh-cCceeeeccCCCCcCCHHHHHHHHHhhhcCcccceecCcccCcccchhhhccchHHHHHHHHHhh
Confidence 2244566677 599999999999999999999999998876544 4443 4898876652377887777765
|
|
| >KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.62 E-value=3e-14 Score=109.78 Aligned_cols=121 Identities=21% Similarity=0.260 Sum_probs=95.9
Q ss_pred CCceEEEEeCCCCC------CCcEEEeccCCCCCC-CCCcccccCC---------CCcEEEEecCCCCCCCCCCCCCCcc
Q 020064 31 DIHTIYWEQSGNPT------GHPVVFLHGGPGGGT-TPSNRRFFDP---------DFYRIILFDQRGAGKSTPHACLDQN 94 (331)
Q Consensus 31 ~g~~l~~~~~g~~~------~~~vl~~HG~~~~~~-~~~~~~~~~~---------~g~~vi~~D~~G~G~s~~~~~~~~~ 94 (331)
.|.++||....++. -.|++++|||+|+-. ++..+..+.. --|.||+|.+||+|.|+.+.. ...
T Consensus 132 eGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk-~GF 210 (469)
T KOG2565|consen 132 EGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSK-TGF 210 (469)
T ss_pred cceeEEEEEecCCccccCCcccceEEecCCCchHHHHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCcc-CCc
Confidence 46688887654431 137999999999844 3444444432 238899999999999998775 467
Q ss_pred chHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhh
Q 020064 95 TTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKK 152 (331)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~ 152 (331)
+....|..+..++=++|..++.+-|-.||..++..+|..+|++|.|+-+-.+...++.
T Consensus 211 n~~a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlasLyPenV~GlHlnm~~~~s~~ 268 (469)
T KOG2565|consen 211 NAAATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASLYPENVLGLHLNMCFVNSPF 268 (469)
T ss_pred cHHHHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHhhcchhhhHhhhcccccCCcH
Confidence 7888899999999999999999999999999999999999999999887766555443
|
|
| >COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.62 E-value=3.7e-14 Score=104.72 Aligned_cols=230 Identities=18% Similarity=0.161 Sum_probs=139.1
Q ss_pred ceeEeCCCceEEEEeCC----CCCCCcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCC----CC-C-----
Q 020064 25 GILKVSDIHTIYWEQSG----NPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTP----HA-C----- 90 (331)
Q Consensus 25 ~~~~~~~g~~l~~~~~g----~~~~~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~----~~-~----- 90 (331)
-+++.-+|.+|.-+-.- ...-|.||-.||.+++...+.-...+...||.|+.+|.||.|.|.. ++ +
T Consensus 59 vTf~g~~g~rI~gwlvlP~~~~~~~P~vV~fhGY~g~~g~~~~~l~wa~~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG 138 (321)
T COG3458 59 VTFTGYGGARIKGWLVLPRHEKGKLPAVVQFHGYGGRGGEWHDMLHWAVAGYAVFVMDVRGQGSSSQDTADPPGGPSDPG 138 (321)
T ss_pred EEEeccCCceEEEEEEeecccCCccceEEEEeeccCCCCCccccccccccceeEEEEecccCCCccccCCCCCCCCcCCc
Confidence 34555667677654322 2245789999997666555555556667899999999999998832 11 0
Q ss_pred ---------CCccchHHHHHHHHHHHHH------hCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhh
Q 020064 91 ---------LDQNTTWDLIDDIEKLRQH------LEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEID 155 (331)
Q Consensus 91 ---------~~~~~~~~~~~~~~~~~~~------~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~ 155 (331)
...+-+.....|+..+++. .+.++|.+.|.|.||.+++.+++..| ++++++..-|.......
T Consensus 139 ~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik~~~~~~Pfl~df~r-- 215 (321)
T COG3458 139 FMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIKAVVADYPFLSDFPR-- 215 (321)
T ss_pred eeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhhcccccccccccchh--
Confidence 0112223334444444433 35579999999999999999999887 79999888775542110
Q ss_pred hHhhcccccCChhhHHhhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHH
Q 020064 156 WFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSL 235 (331)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (331)
.+ ..........+ ..+.+..... -..
T Consensus 216 -------------~i----~~~~~~~ydei-~~y~k~h~~~------------------------------------e~~ 241 (321)
T COG3458 216 -------------AI----ELATEGPYDEI-QTYFKRHDPK------------------------------------EAE 241 (321)
T ss_pred -------------he----eecccCcHHHH-HHHHHhcCch------------------------------------HHH
Confidence 00 00000000000 0010000000 001
Q ss_pred HHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCC-CCcEEEecCCCCCCCcCCchh
Q 020064 236 AFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWP-EADFKVVADAGHSANEPGIAA 314 (331)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~~~~ 314 (331)
.+..+. ..+......++ ++|+|+..|--|++|||...-.+.+.++ .+++.+++.-+|.-...
T Consensus 242 v~~TL~------------yfD~~n~A~Ri-K~pvL~svgL~D~vcpPstqFA~yN~l~~~K~i~iy~~~aHe~~p~---- 304 (321)
T COG3458 242 VFETLS------------YFDIVNLAARI-KVPVLMSVGLMDPVCPPSTQFAAYNALTTSKTIEIYPYFAHEGGPG---- 304 (321)
T ss_pred HHHHHh------------hhhhhhHHHhh-ccceEEeecccCCCCCChhhHHHhhcccCCceEEEeeccccccCcc----
Confidence 111110 33455567778 5999999999999999999999999986 46677788777876433
Q ss_pred HHHHHHHHHHHhhh
Q 020064 315 ELVATNEKLKNLIK 328 (331)
Q Consensus 315 ~~~~~i~~fl~~~~ 328 (331)
-..+.+..|++.+.
T Consensus 305 ~~~~~~~~~l~~l~ 318 (321)
T COG3458 305 FQSRQQVHFLKILF 318 (321)
T ss_pred hhHHHHHHHHHhhc
Confidence 23445566666543
|
|
| >PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function | Back alignment and domain information |
|---|
Probab=99.62 E-value=3.8e-15 Score=114.08 Aligned_cols=109 Identities=19% Similarity=0.240 Sum_probs=61.1
Q ss_pred eEEEEeCCCCCCCcEEEeccCCCCCCC----CCcccccCCCCcEEEEecCC----CCCCCCCCCCCCccchHHHHHHHHH
Q 020064 34 TIYWEQSGNPTGHPVVFLHGGPGGGTT----PSNRRFFDPDFYRIILFDQR----GAGKSTPHACLDQNTTWDLIDDIEK 105 (331)
Q Consensus 34 ~l~~~~~g~~~~~~vl~~HG~~~~~~~----~~~~~~~~~~g~~vi~~D~~----G~G~s~~~~~~~~~~~~~~~~~~~~ 105 (331)
.+.|..........||||.|.+.+-.. ..++..+...+|.|+-+-++ |+|.+ +++.-++||.+
T Consensus 22 afe~~~~~~~~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~---------SL~~D~~eI~~ 92 (303)
T PF08538_consen 22 AFEFTSSSSSAPNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTS---------SLDRDVEEIAQ 92 (303)
T ss_dssp EEEEEEE-TTSSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S-----------HHHHHHHHHH
T ss_pred EEEecCCCCCCCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcc---------hhhhHHHHHHH
Confidence 344444333345579999996554322 34455555679999999876 44544 34444555555
Q ss_pred HHHHh--------CCCcEEEEEeChhHHHHHHHHHhCC-----CceeeEEEeccccchh
Q 020064 106 LRQHL--------EIPEWQVFGGSWGSTLALAYSLAHP-----DKVTGLVLRGIFLLRK 151 (331)
Q Consensus 106 ~~~~~--------~~~~v~lvG~S~Gg~~a~~~a~~~p-----~~v~~li~~~~~~~~~ 151 (331)
+++.+ +.++|+|+|||.|+.-+++|+.... ..|+|+|+-+|.....
T Consensus 93 ~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDRE 151 (303)
T PF08538_consen 93 LVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDRE 151 (303)
T ss_dssp HHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TT
T ss_pred HHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChh
Confidence 44432 3568999999999999999998752 5799999999977654
|
This family contains many hypothetical proteins. ; PDB: 2Q0X_B. |
| >PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases | Back alignment and domain information |
|---|
Probab=99.59 E-value=6.7e-14 Score=101.81 Aligned_cols=237 Identities=9% Similarity=0.086 Sum_probs=122.6
Q ss_pred cceeEeCCCceEEEEeCCCC-----CCCcEEEeccCCCC-CCCCCcccccCCCCcEEEEecCCCC-CCCCCCCCCCccch
Q 020064 24 TGILKVSDIHTIYWEQSGNP-----TGHPVVFLHGGPGG-GTTPSNRRFFDPDFYRIILFDQRGA-GKSTPHACLDQNTT 96 (331)
Q Consensus 24 ~~~~~~~~g~~l~~~~~g~~-----~~~~vl~~HG~~~~-~~~~~~~~~~~~~g~~vi~~D~~G~-G~s~~~~~~~~~~~ 96 (331)
.+.+.+.+|.+|+.++.-|. ..++||+.+|++.. ..+..++.++...||+|+.||.-.| |.|++.- ..+++
T Consensus 4 dhvi~~~~~~~I~vwet~P~~~~~~~~~tiliA~Gf~rrmdh~agLA~YL~~NGFhViRyDsl~HvGlSsG~I--~eftm 81 (294)
T PF02273_consen 4 DHVIRLEDGRQIRVWETRPKNNEPKRNNTILIAPGFARRMDHFAGLAEYLSANGFHVIRYDSLNHVGLSSGDI--NEFTM 81 (294)
T ss_dssp EEEEEETTTEEEEEEEE---TTS---S-EEEEE-TT-GGGGGGHHHHHHHHTTT--EEEE---B---------------H
T ss_pred cceeEcCCCCEEEEeccCCCCCCcccCCeEEEecchhHHHHHHHHHHHHHhhCCeEEEeccccccccCCCCCh--hhcch
Confidence 46788999999999877543 23679999998765 4456788888899999999998875 8888765 57888
Q ss_pred HHHHHHHHHHHHHh---CCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhh
Q 020064 97 WDLIDDIEKLRQHL---EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESF 173 (331)
Q Consensus 97 ~~~~~~~~~~~~~~---~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (331)
....+++..+++++ |..++.|+.-|+.|-+|+..|.+- .+.-+|..-+.......+............
T Consensus 82 s~g~~sL~~V~dwl~~~g~~~~GLIAaSLSaRIAy~Va~~i--~lsfLitaVGVVnlr~TLe~al~~Dyl~~~------- 152 (294)
T PF02273_consen 82 SIGKASLLTVIDWLATRGIRRIGLIAASLSARIAYEVAADI--NLSFLITAVGVVNLRDTLEKALGYDYLQLP------- 152 (294)
T ss_dssp HHHHHHHHHHHHHHHHTT---EEEEEETTHHHHHHHHTTTS----SEEEEES--S-HHHHHHHHHSS-GGGS--------
T ss_pred HHhHHHHHHHHHHHHhcCCCcchhhhhhhhHHHHHHHhhcc--CcceEEEEeeeeeHHHHHHHHhccchhhcc-------
Confidence 88888888887776 677899999999999999999854 477777766665544333322221100000
Q ss_pred hccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCC
Q 020064 174 RDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPS 253 (331)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (331)
...+...+...... .....|...+-. .++..
T Consensus 153 ------------i~~lp~dldfeGh~----------------------------l~~~vFv~dc~e--------~~w~~- 183 (294)
T PF02273_consen 153 ------------IEQLPEDLDFEGHN----------------------------LGAEVFVTDCFE--------HGWDD- 183 (294)
T ss_dssp ------------GGG--SEEEETTEE----------------------------EEHHHHHHHHHH--------TT-SS-
T ss_pred ------------hhhCCCcccccccc----------------------------cchHHHHHHHHH--------cCCcc-
Confidence 00000000000000 000000000000 00000
Q ss_pred cchhhhhccccccccEEEEecCCCCccCCcchHHHHHhC--CCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhh
Q 020064 254 DSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAW--PEADFKVVADAGHSANEPGIAAELVATNEKLKNLI 327 (331)
Q Consensus 254 ~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 327 (331)
.......++.+ ++|++.+++.+|.+|......++.+.+ +..++..++|++|-+... ...+++|.+++
T Consensus 184 l~ST~~~~k~l-~iP~iaF~A~~D~WV~q~eV~~~~~~~~s~~~klysl~Gs~HdL~en------l~vlrnfy~sv 252 (294)
T PF02273_consen 184 LDSTINDMKRL-SIPFIAFTANDDDWVKQSEVEELLDNINSNKCKLYSLPGSSHDLGEN------LVVLRNFYQSV 252 (294)
T ss_dssp HHHHHHHHTT---S-EEEEEETT-TTS-HHHHHHHHTT-TT--EEEEEETT-SS-TTSS------HHHHHHHHHHH
T ss_pred chhHHHHHhhC-CCCEEEEEeCCCccccHHHHHHHHHhcCCCceeEEEecCccchhhhC------hHHHHHHHHHH
Confidence 12234567777 699999999999999988888888866 457888899999987543 33555565554
|
Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B. |
| >PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.7e-13 Score=99.66 Aligned_cols=88 Identities=17% Similarity=0.146 Sum_probs=64.0
Q ss_pred EEEeccCCCCCCCCC---cccccCCC--CcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCcEEEEEeCh
Q 020064 48 VVFLHGGPGGGTTPS---NRRFFDPD--FYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSW 122 (331)
Q Consensus 48 vl~~HG~~~~~~~~~---~~~~~~~~--g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG~S~ 122 (331)
||++||+.++..... ....+.+. ...++.+|++ .......+.+.++++....+.+.|+|.||
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~-------------~~p~~a~~~l~~~i~~~~~~~~~liGSSl 68 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLP-------------PFPEEAIAQLEQLIEELKPENVVLIGSSL 68 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCC-------------cCHHHHHHHHHHHHHhCCCCCeEEEEECh
Confidence 799999877655422 22223222 3566777765 24566778888899988877899999999
Q ss_pred hHHHHHHHHHhCCCceeeEEEeccccchh
Q 020064 123 GSTLALAYSLAHPDKVTGLVLRGIFLLRK 151 (331)
Q Consensus 123 Gg~~a~~~a~~~p~~v~~li~~~~~~~~~ 151 (331)
||..|..+|.+++ +++ |+++|...+.
T Consensus 69 GG~~A~~La~~~~--~~a-vLiNPav~p~ 94 (187)
T PF05728_consen 69 GGFYATYLAERYG--LPA-VLINPAVRPY 94 (187)
T ss_pred HHHHHHHHHHHhC--CCE-EEEcCCCCHH
Confidence 9999999999985 333 8899877653
|
One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised. |
| >PTZ00472 serine carboxypeptidase (CBP1); Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=2.7e-12 Score=107.49 Aligned_cols=132 Identities=18% Similarity=0.203 Sum_probs=89.8
Q ss_pred CCCccceeEeCC---CceEEEEeCC----CCCCCcEEEeccCCCCCCCCCccc------------cc------CCCCcEE
Q 020064 20 EPYSTGILKVSD---IHTIYWEQSG----NPTGHPVVFLHGGPGGGTTPSNRR------------FF------DPDFYRI 74 (331)
Q Consensus 20 ~~~~~~~~~~~~---g~~l~~~~~g----~~~~~~vl~~HG~~~~~~~~~~~~------------~~------~~~g~~v 74 (331)
......++++.+ +..++|+-.. +.+.|+||+++||+|.+....... .+ -.+...+
T Consensus 45 ~~~~sGy~~v~~~~~~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~~~~ 124 (462)
T PTZ00472 45 VNQWSGYFDIPGNQTDKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNNEAYV 124 (462)
T ss_pred CcceeEEEEeCCCCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCcccccccCe
Confidence 344567888854 5578877554 235688999999988654321100 01 1245789
Q ss_pred EEecCC-CCCCCCCCCCCCccchHHHHHHHHHHHHHh-------CCCcEEEEEeChhHHHHHHHHHhC----------CC
Q 020064 75 ILFDQR-GAGKSTPHACLDQNTTWDLIDDIEKLRQHL-------EIPEWQVFGGSWGSTLALAYSLAH----------PD 136 (331)
Q Consensus 75 i~~D~~-G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~v~lvG~S~Gg~~a~~~a~~~----------p~ 136 (331)
+.+|.| |+|.|.........+.++.++|+.++++.+ +..+++|+|||+||..+..+|..- +-
T Consensus 125 l~iDqP~G~G~S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~i 204 (462)
T PTZ00472 125 IYVDQPAGVGFSYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYI 204 (462)
T ss_pred EEEeCCCCcCcccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCcee
Confidence 999975 888887543223455678888888887743 447899999999999998887652 12
Q ss_pred ceeeEEEeccccchh
Q 020064 137 KVTGLVLRGIFLLRK 151 (331)
Q Consensus 137 ~v~~li~~~~~~~~~ 151 (331)
.++|+++.++...+.
T Consensus 205 nLkGi~IGNg~~dp~ 219 (462)
T PTZ00472 205 NLAGLAVGNGLTDPY 219 (462)
T ss_pred eeEEEEEeccccChh
Confidence 478999988876543
|
|
| >PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function | Back alignment and domain information |
|---|
Probab=99.50 E-value=2.9e-13 Score=105.29 Aligned_cols=105 Identities=18% Similarity=0.128 Sum_probs=82.0
Q ss_pred CCcEEEeccCCCCCCC-CCcccccC---CCCcEEEEecCCCCCCCCCCC----CCCccchHHHHHHHHHHHHHhC-----
Q 020064 45 GHPVVFLHGGPGGGTT-PSNRRFFD---PDFYRIILFDQRGAGKSTPHA----CLDQNTTWDLIDDIEKLRQHLE----- 111 (331)
Q Consensus 45 ~~~vl~~HG~~~~~~~-~~~~~~~~---~~g~~vi~~D~~G~G~s~~~~----~~~~~~~~~~~~~~~~~~~~~~----- 111 (331)
+..+++++|.+|-..+ ..+...+. ...+.|++..+.||-.++... ....++++++++...++++.+-
T Consensus 2 ~~li~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~~ 81 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKNK 81 (266)
T ss_pred cEEEEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhcC
Confidence 3568999999987444 33433333 568999999999998777551 2356889988888777776652
Q ss_pred -CCcEEEEEeChhHHHHHHHHHhCC---CceeeEEEeccccc
Q 020064 112 -IPEWQVFGGSWGSTLALAYSLAHP---DKVTGLVLRGIFLL 149 (331)
Q Consensus 112 -~~~v~lvG~S~Gg~~a~~~a~~~p---~~v~~li~~~~~~~ 149 (331)
..+++++|||.|++++++.+.+.+ .+|.+++++-|...
T Consensus 82 ~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~ 123 (266)
T PF10230_consen 82 PNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIE 123 (266)
T ss_pred CCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCccc
Confidence 347999999999999999999999 78999999988654
|
|
| >PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=4e-13 Score=118.80 Aligned_cols=84 Identities=13% Similarity=0.167 Sum_probs=65.5
Q ss_pred cccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhC--------------------CCcEEEEEeCh
Q 020064 63 NRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLE--------------------IPEWQVFGGSW 122 (331)
Q Consensus 63 ~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~v~lvG~S~ 122 (331)
....++++||.|+..|.||+|.|++.... . -.+-.+|..++++.+. ..+|.++|.|+
T Consensus 271 ~~~~~~~rGYaVV~~D~RGtg~SeG~~~~--~-~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY 347 (767)
T PRK05371 271 LNDYFLPRGFAVVYVSGIGTRGSDGCPTT--G-DYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSY 347 (767)
T ss_pred HHHHHHhCCeEEEEEcCCCCCCCCCcCcc--C-CHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcH
Confidence 34556779999999999999999876421 1 1344556666666654 35899999999
Q ss_pred hHHHHHHHHHhCCCceeeEEEeccccc
Q 020064 123 GSTLALAYSLAHPDKVTGLVLRGIFLL 149 (331)
Q Consensus 123 Gg~~a~~~a~~~p~~v~~li~~~~~~~ 149 (331)
||.+++.+|...|..++++|..++...
T Consensus 348 ~G~~~~~aAa~~pp~LkAIVp~a~is~ 374 (767)
T PRK05371 348 LGTLPNAVATTGVEGLETIIPEAAISS 374 (767)
T ss_pred HHHHHHHHHhhCCCcceEEEeeCCCCc
Confidence 999999999998889999999887654
|
|
| >COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.49 E-value=5.2e-13 Score=105.45 Aligned_cols=106 Identities=15% Similarity=0.067 Sum_probs=84.0
Q ss_pred CCcEEEeccCCCCCCCC------CcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCcEEEE
Q 020064 45 GHPVVFLHGGPGGGTTP------SNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVF 118 (331)
Q Consensus 45 ~~~vl~~HG~~~~~~~~------~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lv 118 (331)
++|++++|-+.+....+ ..+..++++|+.|+.+++++=..+.......+|-.+.+.+.+..+.+..+.++|.++
T Consensus 107 ~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~~~~~edYi~e~l~~aid~v~~itg~~~Inli 186 (445)
T COG3243 107 KRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLAAKNLEDYILEGLSEAIDTVKDITGQKDINLI 186 (445)
T ss_pred CCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhhhccHHHHHHHHHHHHHHHHHHHhCcccccee
Confidence 56899999987765543 355567789999999999987766654433445556666777777888888999999
Q ss_pred EeChhHHHHHHHHHhCCCc-eeeEEEeccccch
Q 020064 119 GGSWGSTLALAYSLAHPDK-VTGLVLRGIFLLR 150 (331)
Q Consensus 119 G~S~Gg~~a~~~a~~~p~~-v~~li~~~~~~~~ 150 (331)
|+|.||.++..+++.++.+ |+.++++.++...
T Consensus 187 GyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF 219 (445)
T COG3243 187 GYCVGGTLLAAALALMAAKRIKSLTLLTSPVDF 219 (445)
T ss_pred eEecchHHHHHHHHhhhhcccccceeeecchhh
Confidence 9999999999999999887 9999998876654
|
|
| >PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics [] | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.2e-13 Score=106.56 Aligned_cols=100 Identities=16% Similarity=0.191 Sum_probs=76.3
Q ss_pred CcEEEeccCCCCCCCCCcccccCCC-CcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCC-cEEEEEeChh
Q 020064 46 HPVVFLHGGPGGGTTPSNRRFFDPD-FYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIP-EWQVFGGSWG 123 (331)
Q Consensus 46 ~~vl~~HG~~~~~~~~~~~~~~~~~-g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~lvG~S~G 123 (331)
++|+++|+++++...+......+.. .+.|+.++.+|.+.... ...+++++++...+.+.....+ ++.|+|||+|
T Consensus 1 ~~lf~~p~~gG~~~~y~~la~~l~~~~~~v~~i~~~~~~~~~~----~~~si~~la~~y~~~I~~~~~~gp~~L~G~S~G 76 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSYRPLARALPDDVIGVYGIEYPGRGDDEP----PPDSIEELASRYAEAIRARQPEGPYVLAGWSFG 76 (229)
T ss_dssp -EEEEESSTTCSGGGGHHHHHHHTTTEEEEEEECSTTSCTTSH----EESSHHHHHHHHHHHHHHHTSSSSEEEEEETHH
T ss_pred CeEEEEcCCccCHHHHHHHHHhCCCCeEEEEEEecCCCCCCCC----CCCCHHHHHHHHHHHhhhhCCCCCeeehccCcc
Confidence 3699999977775554444444455 49999999999983322 2468999999988877776655 9999999999
Q ss_pred HHHHHHHHHhC---CCceeeEEEeccccc
Q 020064 124 STLALAYSLAH---PDKVTGLVLRGIFLL 149 (331)
Q Consensus 124 g~~a~~~a~~~---p~~v~~li~~~~~~~ 149 (331)
|.+|+.+|.+. ...+..+++++++++
T Consensus 77 g~lA~E~A~~Le~~G~~v~~l~liD~~~p 105 (229)
T PF00975_consen 77 GILAFEMARQLEEAGEEVSRLILIDSPPP 105 (229)
T ss_dssp HHHHHHHHHHHHHTT-SESEEEEESCSST
T ss_pred HHHHHHHHHHHHHhhhccCceEEecCCCC
Confidence 99999999764 446999999997654
|
Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A .... |
| >COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.7e-12 Score=90.05 Aligned_cols=173 Identities=19% Similarity=0.125 Sum_probs=116.6
Q ss_pred CcEEEeccCCCCCC--CCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCcEEEEEeChh
Q 020064 46 HPVVFLHGGPGGGT--TPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWG 123 (331)
Q Consensus 46 ~~vl~~HG~~~~~~--~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG~S~G 123 (331)
+.+|++||..+|+. |......-+.. +-.+++. +...-..+++++.+.+.+... .++++||+||+|
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~we~~l~~---a~rveq~---------~w~~P~~~dWi~~l~~~v~a~-~~~~vlVAHSLG 69 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSRWESALPN---ARRVEQD---------DWEAPVLDDWIARLEKEVNAA-EGPVVLVAHSLG 69 (181)
T ss_pred ceEEEecCCCCCChhHHHHHHHhhCcc---chhcccC---------CCCCCCHHHHHHHHHHHHhcc-CCCeEEEEeccc
Confidence 46899999666543 32222221111 2222222 113456889999998888887 367999999999
Q ss_pred HHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhccccCCCchHHHHH
Q 020064 124 STLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYA 203 (331)
Q Consensus 124 g~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (331)
+.++++++.+....|+|+++++|+....... +.. ...
T Consensus 70 c~~v~h~~~~~~~~V~GalLVAppd~~~~~~---------------~~~----------------~~~------------ 106 (181)
T COG3545 70 CATVAHWAEHIQRQVAGALLVAPPDVSRPEI---------------RPK----------------HLM------------ 106 (181)
T ss_pred HHHHHHHHHhhhhccceEEEecCCCcccccc---------------chh----------------hcc------------
Confidence 9999999998877999999999865421100 000 000
Q ss_pred HHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCCCccCCc
Q 020064 204 AARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMM 283 (331)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~ 283 (331)
..+.. ....+ --|.+++.+++|++++++
T Consensus 107 --------------------------------------------------tf~~~-p~~~l-pfps~vvaSrnDp~~~~~ 134 (181)
T COG3545 107 --------------------------------------------------TFDPI-PREPL-PFPSVVVASRNDPYVSYE 134 (181)
T ss_pred --------------------------------------------------ccCCC-ccccC-CCceeEEEecCCCCCCHH
Confidence 00000 12233 379999999999999999
Q ss_pred chHHHHHhCCCCcEEEecCCCCCCCc---CCchhHHHHHHHHHHHhhh
Q 020064 284 SAWDLHKAWPEADFKVVADAGHSANE---PGIAAELVATNEKLKNLIK 328 (331)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~gH~~~~---~~~~~~~~~~i~~fl~~~~ 328 (331)
.++.+++.. ++.++.+.++||+--. .. ..+....+.+|+.+..
T Consensus 135 ~a~~~a~~w-gs~lv~~g~~GHiN~~sG~g~-wpeg~~~l~~~~s~~~ 180 (181)
T COG3545 135 HAEDLANAW-GSALVDVGEGGHINAESGFGP-WPEGYALLAQLLSRAT 180 (181)
T ss_pred HHHHHHHhc-cHhheecccccccchhhcCCC-cHHHHHHHHHHhhhhc
Confidence 999999988 6888888889998643 33 6677778888877653
|
|
| >COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.48 E-value=2.3e-12 Score=87.41 Aligned_cols=180 Identities=14% Similarity=0.115 Sum_probs=124.8
Q ss_pred cEEEeccCCCCC---CCCCcccccCCCCcEEEEecCCCC-----CCCCCCCCCCccchHHHHHHHHHHHHHhCCCcEEEE
Q 020064 47 PVVFLHGGPGGG---TTPSNRRFFDPDFYRIILFDQRGA-----GKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVF 118 (331)
Q Consensus 47 ~vl~~HG~~~~~---~~~~~~~~~~~~g~~vi~~D~~G~-----G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lv 118 (331)
+||+.||.+.+. .....+..+...|+.|..++++-. |...+++. ...-...+...+.++.+.+...+.++-
T Consensus 16 tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~-~~t~~~~~~~~~aql~~~l~~gpLi~G 94 (213)
T COG3571 16 TILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPG-SGTLNPEYIVAIAQLRAGLAEGPLIIG 94 (213)
T ss_pred EEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCc-cccCCHHHHHHHHHHHhcccCCceeec
Confidence 689999955442 235567778889999999998753 32222221 233455678888888998887899999
Q ss_pred EeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhccccCCCch
Q 020064 119 GGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDK 198 (331)
Q Consensus 119 G~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (331)
|+||||-++.+.+..-.-.|+++++++-+..++...
T Consensus 95 GkSmGGR~aSmvade~~A~i~~L~clgYPfhppGKP-------------------------------------------- 130 (213)
T COG3571 95 GKSMGGRVASMVADELQAPIDGLVCLGYPFHPPGKP-------------------------------------------- 130 (213)
T ss_pred cccccchHHHHHHHhhcCCcceEEEecCccCCCCCc--------------------------------------------
Confidence 999999999998887655699999988554332100
Q ss_pred HHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCCC
Q 020064 199 ETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDV 278 (331)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~ 278 (331)
+.-..+.|..+ ++|+||.+|+.|+
T Consensus 131 -------------------------------------------------------e~~Rt~HL~gl-~tPtli~qGtrD~ 154 (213)
T COG3571 131 -------------------------------------------------------EQLRTEHLTGL-KTPTLITQGTRDE 154 (213)
T ss_pred -------------------------------------------------------ccchhhhccCC-CCCeEEeeccccc
Confidence 11123467778 4999999999999
Q ss_pred ccCCcchHHHHHhCCCCcEEEecCCCCCCCcC---------CchhHHHHHHHHHHHhhh
Q 020064 279 CCPMMSAWDLHKAWPEADFKVVADAGHSANEP---------GIAAELVATNEKLKNLIK 328 (331)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~---------~~~~~~~~~i~~fl~~~~ 328 (331)
+-..+.... +...+..+++.++++.|-+-.. +.-....+.|..|++++.
T Consensus 155 fGtr~~Va~-y~ls~~iev~wl~~adHDLkp~k~vsgls~~~hL~~~A~~va~~~~~l~ 212 (213)
T COG3571 155 FGTRDEVAG-YALSDPIEVVWLEDADHDLKPRKLVSGLSTADHLKTLAEQVAGWARRLA 212 (213)
T ss_pred ccCHHHHHh-hhcCCceEEEEeccCccccccccccccccHHHHHHHHHHHHHHHHhhcC
Confidence 876544421 2223678999999999976321 124556677777877653
|
|
| >KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.8e-13 Score=98.40 Aligned_cols=180 Identities=14% Similarity=0.098 Sum_probs=119.0
Q ss_pred CCCCCCC-cEEEecc-CCCCCC-CCCcccccCCCCcEEEEecCC-CCCCCCCCCC------CCccchHHHHHHHHHHHHH
Q 020064 40 SGNPTGH-PVVFLHG-GPGGGT-TPSNRRFFDPDFYRIILFDQR-GAGKSTPHAC------LDQNTTWDLIDDIEKLRQH 109 (331)
Q Consensus 40 ~g~~~~~-~vl~~HG-~~~~~~-~~~~~~~~~~~g~~vi~~D~~-G~G~s~~~~~------~~~~~~~~~~~~~~~~~~~ 109 (331)
.|+.+.+ .||++-- ++-+.. ....+..++..||.|++||+. |--.|...+. ....+....-.++..+++.
T Consensus 33 ~gs~~~~~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~ 112 (242)
T KOG3043|consen 33 VGSTSSKKVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKW 112 (242)
T ss_pred ecCCCCCeEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHH
Confidence 3543444 6777777 443332 466777777899999999975 3222221110 0112333334445555444
Q ss_pred h---C-CCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhh
Q 020064 110 L---E-IPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCF 185 (331)
Q Consensus 110 ~---~-~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (331)
+ + ..+|.++|+||||.++..+....| .+.+++..-|....
T Consensus 113 lk~~g~~kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~hps~~d----------------------------------- 156 (242)
T KOG3043|consen 113 LKNHGDSKKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFHPSFVD----------------------------------- 156 (242)
T ss_pred HHHcCCcceeeEEEEeecceEEEEeeccch-hheeeeEecCCcCC-----------------------------------
Confidence 4 4 568999999999999998888887 57666665543211
Q ss_pred HHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccc
Q 020064 186 VDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIR 265 (331)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 265 (331)
.+.+.++
T Consensus 157 ------------------------------------------------------------------------~~D~~~v- 163 (242)
T KOG3043|consen 157 ------------------------------------------------------------------------SADIANV- 163 (242)
T ss_pred ------------------------------------------------------------------------hhHHhcC-
Confidence 1245566
Q ss_pred cccEEEEecCCCCccCCcchHHHHHhCC-----CCcEEEecCCCCCCCc----------CCchhHHHHHHHHHHHhhh
Q 020064 266 HINATIVQGRYDVCCPMMSAWDLHKAWP-----EADFKVVADAGHSANE----------PGIAAELVATNEKLKNLIK 328 (331)
Q Consensus 266 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~-----~~~~~~~~~~gH~~~~----------~~~~~~~~~~i~~fl~~~~ 328 (331)
++|||++.|+.|.++|++....+.+.+. +.++.+++|-+|.+.. ....++..+.+..|++...
T Consensus 164 k~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~~y~ 241 (242)
T KOG3043|consen 164 KAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFVARRANISSPEDKKAAEEAYQRFISWFKHYL 241 (242)
T ss_pred CCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccchhhhhccCCCChhHHHHHHHHHHHHHHHHHHhh
Confidence 5999999999999999998888888773 2469999999998752 1235667777777777653
|
|
| >PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins | Back alignment and domain information |
|---|
Probab=99.45 E-value=1e-12 Score=93.41 Aligned_cols=96 Identities=16% Similarity=0.068 Sum_probs=73.2
Q ss_pred cEEEecc-CCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHH----HhCCCcEEEEEeC
Q 020064 47 PVVFLHG-GPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQ----HLEIPEWQVFGGS 121 (331)
Q Consensus 47 ~vl~~HG-~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~v~lvG~S 121 (331)
.+||+.| ++...........+.++|+.|+.+|-+-|=.+.+ +.++.+.|+..+++ +.+.++++|+|+|
T Consensus 4 ~~v~~SGDgGw~~~d~~~a~~l~~~G~~VvGvdsl~Yfw~~r-------tP~~~a~Dl~~~i~~y~~~w~~~~vvLiGYS 76 (192)
T PF06057_consen 4 LAVFFSGDGGWRDLDKQIAEALAKQGVPVVGVDSLRYFWSER-------TPEQTAADLARIIRHYRARWGRKRVVLIGYS 76 (192)
T ss_pred EEEEEeCCCCchhhhHHHHHHHHHCCCeEEEechHHHHhhhC-------CHHHHHHHHHHHHHHHHHHhCCceEEEEeec
Confidence 4788888 5555555778888989999999999776655543 44556666666655 4577899999999
Q ss_pred hhHHHHHHHHHhCCC----ceeeEEEeccccc
Q 020064 122 WGSTLALAYSLAHPD----KVTGLVLRGIFLL 149 (331)
Q Consensus 122 ~Gg~~a~~~a~~~p~----~v~~li~~~~~~~ 149 (331)
+|+-+......+.|. +|+.++++++...
T Consensus 77 FGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~~ 108 (192)
T PF06057_consen 77 FGADVLPFIYNRLPAALRARVAQVVLLSPSTT 108 (192)
T ss_pred CCchhHHHHHhhCCHHHHhheeEEEEeccCCc
Confidence 999888888877764 7999999998543
|
VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium []. |
| >TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family | Back alignment and domain information |
|---|
Probab=99.42 E-value=4.7e-13 Score=116.34 Aligned_cols=109 Identities=17% Similarity=0.133 Sum_probs=81.2
Q ss_pred eeEeCCCceEEEEeCCCC---------CCCcEEEeccCCCC-CCCCCcccccCCCCcEEEEecCCCCCCCCCC-------
Q 020064 26 ILKVSDIHTIYWEQSGNP---------TGHPVVFLHGGPGG-GTTPSNRRFFDPDFYRIILFDQRGAGKSTPH------- 88 (331)
Q Consensus 26 ~~~~~~g~~l~~~~~g~~---------~~~~vl~~HG~~~~-~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~------- 88 (331)
.+...++.++.|...|.. ..|+||++||+.++ ..|..++..+.++||+|+++|+||||.|...
T Consensus 421 ~~~~p~~~~i~~~~~~~g~~~~~~p~~g~P~VVllHG~~g~~~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~ 500 (792)
T TIGR03502 421 LLTTPNGPVIAAFRAGTGLETFAAPTDGWPVVIYQHGITGAKENALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVN 500 (792)
T ss_pred EEEecCcchhhhhhcccccccccCCCCCCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEeCCCCCCcccccccccccc
Confidence 455567767777765421 12579999997665 4466677777778999999999999999433
Q ss_pred ---CCCC-----------ccchHHHHHHHHHHHHHhC----------------CCcEEEEEeChhHHHHHHHHHhC
Q 020064 89 ---ACLD-----------QNTTWDLIDDIEKLRQHLE----------------IPEWQVFGGSWGSTLALAYSLAH 134 (331)
Q Consensus 89 ---~~~~-----------~~~~~~~~~~~~~~~~~~~----------------~~~v~lvG~S~Gg~~a~~~a~~~ 134 (331)
.... ..++++.+.|+..++..+. ..+++++||||||.++..++...
T Consensus 501 a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~a 576 (792)
T TIGR03502 501 ATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAYA 576 (792)
T ss_pred ccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHhc
Confidence 1111 1267889999998887776 34899999999999999999753
|
Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae |
| >PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=99.41 E-value=2.1e-13 Score=103.76 Aligned_cols=96 Identities=22% Similarity=0.223 Sum_probs=63.6
Q ss_pred EEEeccCCCCC---C-CCCcccccCC-CCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHH-----hCCCcEEE
Q 020064 48 VVFLHGGPGGG---T-TPSNRRFFDP-DFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQH-----LEIPEWQV 117 (331)
Q Consensus 48 vl~~HG~~~~~---~-~~~~~~~~~~-~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~v~l 117 (331)
||++|||+... . .+.....+++ .|+.|+.+|+|=..... ....++|..+.+..+++. .+.++|++
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p~~~-----~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l 75 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAPEAP-----FPAALEDVKAAYRWLLKNADKLGIDPERIVL 75 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TTTSS-----TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeecccccccc-----ccccccccccceeeeccccccccccccceEE
Confidence 79999976432 2 2334455554 89999999999542221 234556666666666666 45568999
Q ss_pred EEeChhHHHHHHHHHhCCC----ceeeEEEecccc
Q 020064 118 FGGSWGSTLALAYSLAHPD----KVTGLVLRGIFL 148 (331)
Q Consensus 118 vG~S~Gg~~a~~~a~~~p~----~v~~li~~~~~~ 148 (331)
+|+|.||.+++.++....+ .++++++++|..
T Consensus 76 ~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~ 110 (211)
T PF07859_consen 76 IGDSAGGHLALSLALRARDRGLPKPKGIILISPWT 110 (211)
T ss_dssp EEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHS
T ss_pred eecccccchhhhhhhhhhhhcccchhhhhcccccc
Confidence 9999999999999976432 489999999854
|
; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A .... |
| >PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.8e-13 Score=84.56 Aligned_cols=76 Identities=21% Similarity=0.347 Sum_probs=61.2
Q ss_pred CceEEEEeCCCCC--CCcEEEeccCCC-CCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHH
Q 020064 32 IHTIYWEQSGNPT--GHPVVFLHGGPG-GGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQ 108 (331)
Q Consensus 32 g~~l~~~~~g~~~--~~~vl~~HG~~~-~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~ 108 (331)
|.+|+|+.+.+++ +.+|+++||... +..+..++..+.++||.|+++|+||||.|..... ...+++++++|+..+++
T Consensus 1 G~~L~~~~w~p~~~~k~~v~i~HG~~eh~~ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg-~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 1 GTKLFYRRWKPENPPKAVVVIVHGFGEHSGRYAHLAEFLAEQGYAVFAYDHRGHGRSEGKRG-HIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred CcEEEEEEecCCCCCCEEEEEeCCcHHHHHHHHHHHHHHHhCCCEEEEECCCcCCCCCCccc-ccCCHHHHHHHHHHHhC
Confidence 4578888887654 347999999654 5667888999999999999999999999986553 34688999999988763
|
Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins. |
| >PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively [] | Back alignment and domain information |
|---|
Probab=99.40 E-value=6.9e-12 Score=98.92 Aligned_cols=117 Identities=16% Similarity=0.081 Sum_probs=74.9
Q ss_pred CCceEEEEeC-----CCCCCCcEEEeccCCCCCCC----C-Cccc------ccCCCCcEEEEecCCCCCCCCCCCCCCcc
Q 020064 31 DIHTIYWEQS-----GNPTGHPVVFLHGGPGGGTT----P-SNRR------FFDPDFYRIILFDQRGAGKSTPHACLDQN 94 (331)
Q Consensus 31 ~g~~l~~~~~-----g~~~~~~vl~~HG~~~~~~~----~-~~~~------~~~~~g~~vi~~D~~G~G~s~~~~~~~~~ 94 (331)
||.+|+...+ +...-|+||..|+.+.+... . .... .++++||.||..|.||.|.|.......
T Consensus 1 DGv~L~adv~~P~~~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~-- 78 (272)
T PF02129_consen 1 DGVRLAADVYRPGADGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPM-- 78 (272)
T ss_dssp TS-EEEEEEEEE--TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TT--
T ss_pred CCCEEEEEEEecCCCCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccC--
Confidence 4556654333 22233678888886643211 1 1111 277899999999999999999766321
Q ss_pred chHHHHHHHHHHHHHhC-----CCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccch
Q 020064 95 TTWDLIDDIEKLRQHLE-----IPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLR 150 (331)
Q Consensus 95 ~~~~~~~~~~~~~~~~~-----~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~ 150 (331)
...-++|..++++.+. ..+|.++|.|++|..++.+|+..|..+++++...+....
T Consensus 79 -~~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~ 138 (272)
T PF02129_consen 79 -SPNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDL 138 (272)
T ss_dssp -SHHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBT
T ss_pred -ChhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCcc
Confidence 4455666666666552 238999999999999999999888899999988775543
|
It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A .... |
| >PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=99.37 E-value=2.2e-11 Score=91.90 Aligned_cols=100 Identities=20% Similarity=0.165 Sum_probs=71.4
Q ss_pred CCCcEEEeccCCCC-CCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHh----------CC
Q 020064 44 TGHPVVFLHGGPGG-GTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHL----------EI 112 (331)
Q Consensus 44 ~~~~vl~~HG~~~~-~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~----------~~ 112 (331)
+=|+|||+||+... ..+..+...+++.||-|+++|+...+.... ....+...+-+..+.+.+ +.
T Consensus 16 ~yPVv~f~~G~~~~~s~Ys~ll~hvAShGyIVV~~d~~~~~~~~~-----~~~~~~~~~vi~Wl~~~L~~~l~~~v~~D~ 90 (259)
T PF12740_consen 16 TYPVVLFLHGFLLINSWYSQLLEHVASHGYIVVAPDLYSIGGPDD-----TDEVASAAEVIDWLAKGLESKLPLGVKPDF 90 (259)
T ss_pred CcCEEEEeCCcCCCHHHHHHHHHHHHhCceEEEEecccccCCCCc-----chhHHHHHHHHHHHHhcchhhccccccccc
Confidence 56889999996643 445678888889999999999766443221 112333333333322211 44
Q ss_pred CcEEEEEeChhHHHHHHHHHhC-----CCceeeEEEecccc
Q 020064 113 PEWQVFGGSWGSTLALAYSLAH-----PDKVTGLVLRGIFL 148 (331)
Q Consensus 113 ~~v~lvG~S~Gg~~a~~~a~~~-----p~~v~~li~~~~~~ 148 (331)
.++.|.|||-||-++..++..+ +.+++++|+++|..
T Consensus 91 s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 91 SKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVD 131 (259)
T ss_pred cceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEecccc
Confidence 5899999999999999999987 56899999999965
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >PRK10252 entF enterobactin synthase subunit F; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=1.7e-11 Score=117.75 Aligned_cols=101 Identities=14% Similarity=0.068 Sum_probs=81.8
Q ss_pred CCCcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCC-CcEEEEEeCh
Q 020064 44 TGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEI-PEWQVFGGSW 122 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~lvG~S~ 122 (331)
++++++++||++++...|......+..+++|+++|.+|+|.+.. ..++++++++++.+.++.+.. .+++++|||+
T Consensus 1067 ~~~~l~~lh~~~g~~~~~~~l~~~l~~~~~v~~~~~~g~~~~~~----~~~~l~~la~~~~~~i~~~~~~~p~~l~G~S~ 1142 (1296)
T PRK10252 1067 DGPTLFCFHPASGFAWQFSVLSRYLDPQWSIYGIQSPRPDGPMQ----TATSLDEVCEAHLATLLEQQPHGPYHLLGYSL 1142 (1296)
T ss_pred CCCCeEEecCCCCchHHHHHHHHhcCCCCcEEEEECCCCCCCCC----CCCCHHHHHHHHHHHHHhhCCCCCEEEEEech
Confidence 45789999997776555544444557789999999999986632 357899999999999988654 4899999999
Q ss_pred hHHHHHHHHHh---CCCceeeEEEecccc
Q 020064 123 GSTLALAYSLA---HPDKVTGLVLRGIFL 148 (331)
Q Consensus 123 Gg~~a~~~a~~---~p~~v~~li~~~~~~ 148 (331)
||.++..+|.+ .++++..++++++..
T Consensus 1143 Gg~vA~e~A~~l~~~~~~v~~l~l~~~~~ 1171 (1296)
T PRK10252 1143 GGTLAQGIAARLRARGEEVAFLGLLDTWP 1171 (1296)
T ss_pred hhHHHHHHHHHHHHcCCceeEEEEecCCC
Confidence 99999999986 578899999998743
|
|
| >KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.35 E-value=7.8e-11 Score=104.22 Aligned_cols=222 Identities=18% Similarity=0.178 Sum_probs=141.9
Q ss_pred cceeEeCCCceEEEEeCCCC------CCCcEEEeccCCCCCCC-----CCccc-ccCCCCcEEEEecCCCCCCCCCC---
Q 020064 24 TGILKVSDIHTIYWEQSGNP------TGHPVVFLHGGPGGGTT-----PSNRR-FFDPDFYRIILFDQRGAGKSTPH--- 88 (331)
Q Consensus 24 ~~~~~~~~g~~l~~~~~g~~------~~~~vl~~HG~~~~~~~-----~~~~~-~~~~~g~~vi~~D~~G~G~s~~~--- 88 (331)
-..+.. +|....+...-|+ +-|.++.+|||+++... -.+.. .....|+.|+.+|.||.|.....
T Consensus 500 ~~~i~~-~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~~~G~~~~~ 578 (755)
T KOG2100|consen 500 FGKIEI-DGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAVLQVDGRGSGGYGWDFRS 578 (755)
T ss_pred eEEEEe-ccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHHhhccCCeEEEEEcCCCcCCcchhHHH
Confidence 344455 6657766654331 22567889999874322 11222 34568999999999997765432
Q ss_pred ---CCCCccchHHHHHHHHHHHHHh--CCCcEEEEEeChhHHHHHHHHHhCCCc-eeeEEEeccccchhhhhhhHhhccc
Q 020064 89 ---ACLDQNTTWDLIDDIEKLRQHL--EIPEWQVFGGSWGSTLALAYSLAHPDK-VTGLVLRGIFLLRKKEIDWFYEGGA 162 (331)
Q Consensus 89 ---~~~~~~~~~~~~~~~~~~~~~~--~~~~v~lvG~S~Gg~~a~~~a~~~p~~-v~~li~~~~~~~~~~~~~~~~~~~~ 162 (331)
........+|+...+..+++.. +.+++.++|+|.||.+++.++...|+. ++..+.++|.....-
T Consensus 579 ~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~~---------- 648 (755)
T KOG2100|consen 579 ALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWLY---------- 648 (755)
T ss_pred HhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeeee----------
Confidence 1223456777777777777665 445899999999999999999999855 455599998765320
Q ss_pred ccCChhhHHhhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhh
Q 020064 163 AAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIEN 242 (331)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (331)
.... .-.++. ..+. ..... +.
T Consensus 649 ----yds~--------------~terym---g~p~-------------------------~~~~~-----y~-------- 669 (755)
T KOG2100|consen 649 ----YDST--------------YTERYM---GLPS-------------------------ENDKG-----YE-------- 669 (755)
T ss_pred ----eccc--------------ccHhhc---CCCc-------------------------cccch-----hh--------
Confidence 0000 000000 0000 00000 00
Q ss_pred hhhhccCCCCCcchhhhhccccccccE-EEEecCCCCccCCcchHHHHHhCC----CCcEEEecCCCCCCCcCCchhHHH
Q 020064 243 HYFLNKGFFPSDSFLLDNIDNIRHINA-TIVQGRYDVCCPMMSAWDLHKAWP----EADFKVVADAGHSANEPGIAAELV 317 (331)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~l~~i~~~P~-l~i~G~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~~~~~~~~~ 317 (331)
.......+..++ .|. |+|||+.|.-|+.+.+..+.+.+. ..++.++|+.+|.+-....-..+.
T Consensus 670 -----------e~~~~~~~~~~~-~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde~H~is~~~~~~~~~ 737 (755)
T KOG2100|consen 670 -----------ESSVSSPANNIK-TPKLLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYPDENHGISYVEVISHLY 737 (755)
T ss_pred -----------hccccchhhhhc-cCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeCCCCcccccccchHHHH
Confidence 222334566664 555 999999999999988888887762 378899999999997654457788
Q ss_pred HHHHHHHHhh
Q 020064 318 ATNEKLKNLI 327 (331)
Q Consensus 318 ~~i~~fl~~~ 327 (331)
..+..|+...
T Consensus 738 ~~~~~~~~~~ 747 (755)
T KOG2100|consen 738 EKLDRFLRDC 747 (755)
T ss_pred HHHHHHHHHH
Confidence 8899998754
|
|
| >PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=99.34 E-value=7.6e-11 Score=92.17 Aligned_cols=238 Identities=13% Similarity=0.099 Sum_probs=127.7
Q ss_pred CCCCcEEEeccCCCCCCCC--C-cccccCCCCcEEEEecCCCCCCCCCCCCCCc--cchHH-------HHHH---HHHHH
Q 020064 43 PTGHPVVFLHGGPGGGTTP--S-NRRFFDPDFYRIILFDQRGAGKSTPHACLDQ--NTTWD-------LIDD---IEKLR 107 (331)
Q Consensus 43 ~~~~~vl~~HG~~~~~~~~--~-~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~--~~~~~-------~~~~---~~~~~ 107 (331)
+.+|.+|.++|-++...+. . .+..++++|+..+.+..|-||.-.+...... .+..| .+.+ +..++
T Consensus 90 ~~rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~Wl 169 (348)
T PF09752_consen 90 PYRPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLHWL 169 (348)
T ss_pred CCCceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHHHH
Confidence 3567788888866655552 2 3677888999999999999998764431110 11111 1222 22333
Q ss_pred HHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHH
Q 020064 108 QHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVD 187 (331)
Q Consensus 108 ~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (331)
+.-|..++.+.|.||||.+|...|+.+|..+..+-.+++......-..-.... ...|.................
T Consensus 170 ~~~G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~vFt~Gvls~------~i~W~~L~~q~~~~~~~~~~~ 243 (348)
T PF09752_consen 170 EREGYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASVVFTEGVLSN------SINWDALEKQFEDTVYEEEIS 243 (348)
T ss_pred HhcCCCceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCcchhhhhhhc------CCCHHHHHHHhcccchhhhhc
Confidence 44488899999999999999999999998777666665533221100000000 112222222111111000000
Q ss_pred hhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccc--
Q 020064 188 AYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIR-- 265 (331)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~-- 265 (331)
........ ...........+.-...+... ..+....+.++.
T Consensus 244 ~~~~~~~~------------------------~~~~~~~~~~~~~Ea~~~m~~-------------~md~~T~l~nf~~P 286 (348)
T PF09752_consen 244 DIPAQNKS------------------------LPLDSMEERRRDREALRFMRG-------------VMDSFTHLTNFPVP 286 (348)
T ss_pred ccccCccc------------------------ccchhhccccchHHHHHHHHH-------------HHHhhccccccCCC
Confidence 00000000 000000000000000000000 000011122221
Q ss_pred --cccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCC-CcCCchhHHHHHHHHHHH
Q 020064 266 --HINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSA-NEPGIAAELVATNEKLKN 325 (331)
Q Consensus 266 --~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~-~~~~~~~~~~~~i~~fl~ 325 (331)
.-.+.++.+++|..+|......+.+..|++++..+++ ||.- ++-+ .+.+-+.|.+-++
T Consensus 287 ~dp~~ii~V~A~~DaYVPr~~v~~Lq~~WPGsEvR~l~g-GHVsA~L~~-q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 287 VDPSAIIFVAAKNDAYVPRHGVLSLQEIWPGSEVRYLPG-GHVSAYLLH-QEAFRQAIYDAFE 347 (348)
T ss_pred CCCCcEEEEEecCceEechhhcchHHHhCCCCeEEEecC-CcEEEeeec-hHHHHHHHHHHhh
Confidence 2457899999999999988889999999999999985 9975 3343 6777778777664
|
|
| >KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.2e-10 Score=96.44 Aligned_cols=223 Identities=14% Similarity=0.106 Sum_probs=142.9
Q ss_pred cceeEeCCCceEEEEeCCC------CCCCcEEEeccCCCCCC----C----CCcccccCCCCcEEEEecCCCCCCCCCCC
Q 020064 24 TGILKVSDIHTIYWEQSGN------PTGHPVVFLHGGPGGGT----T----PSNRRFFDPDFYRIILFDQRGAGKSTPHA 89 (331)
Q Consensus 24 ~~~~~~~~g~~l~~~~~g~------~~~~~vl~~HG~~~~~~----~----~~~~~~~~~~g~~vi~~D~~G~G~s~~~~ 89 (331)
-..+++..|.+++--.+.+ ++-|+++++-||++... + +.-...+++.||.|+.+|-||.-......
T Consensus 615 if~fqs~tg~~lYgmiyKPhn~~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlkF 694 (867)
T KOG2281|consen 615 IFSFQSKTGLTLYGMIYKPHNFQPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLKF 694 (867)
T ss_pred heeeecCCCcEEEEEEEccccCCCCCCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchhh
Confidence 3445666775554333321 13578999999987421 1 22334466799999999999954333111
Q ss_pred ------CCCccchHHHHHHHHHHHHHhC---CCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhc
Q 020064 90 ------CLDQNTTWDLIDDIEKLRQHLE---IPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEG 160 (331)
Q Consensus 90 ------~~~~~~~~~~~~~~~~~~~~~~---~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~ 160 (331)
......++|.++.++.+.++.| .++|.+-|||+||++++....++|+-++..|.-+|.....
T Consensus 695 E~~ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT~W~--------- 765 (867)
T KOG2281|consen 695 ESHIKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVTDWR--------- 765 (867)
T ss_pred HHHHhhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcceeeEEeccCcceeee---------
Confidence 1235678999999999999875 5699999999999999999999999888777666654321
Q ss_pred ccccCChhhHHhhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhh
Q 020064 161 GAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARI 240 (331)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (331)
.+-.. ..++++..... .-..+.
T Consensus 766 -----------~YDTg--------YTERYMg~P~~----------------------------nE~gY~----------- 787 (867)
T KOG2281|consen 766 -----------LYDTG--------YTERYMGYPDN----------------------------NEHGYG----------- 787 (867)
T ss_pred -----------eeccc--------chhhhcCCCcc----------------------------chhccc-----------
Confidence 00000 00011100000 000000
Q ss_pred hhhhhhccCCCCCcchhhhhccccc--cccEEEEecCCCCccCCcchHHHHHhC----CCCcEEEecCCCCCCCcCCchh
Q 020064 241 ENHYFLNKGFFPSDSFLLDNIDNIR--HINATIVQGRYDVCCPMMSAWDLHKAW----PEADFKVVADAGHSANEPGIAA 314 (331)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~l~~i~--~~P~l~i~G~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~~~~~~ 314 (331)
...+.....+++ ....|++||--|.-|.......+.+.+ +..+++++|+-.|.+-..+...
T Consensus 788 -------------agSV~~~VeklpdepnRLlLvHGliDENVHF~Hts~Lvs~lvkagKpyeL~IfP~ERHsiR~~es~~ 854 (867)
T KOG2281|consen 788 -------------AGSVAGHVEKLPDEPNRLLLVHGLIDENVHFAHTSRLVSALVKAGKPYELQIFPNERHSIRNPESGI 854 (867)
T ss_pred -------------chhHHHHHhhCCCCCceEEEEecccccchhhhhHHHHHHHHHhCCCceEEEEccccccccCCCccch
Confidence 111222223332 356899999999999887776666655 4578999999999997655577
Q ss_pred HHHHHHHHHHHh
Q 020064 315 ELVATNEKLKNL 326 (331)
Q Consensus 315 ~~~~~i~~fl~~ 326 (331)
-+-..|..|+++
T Consensus 855 ~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 855 YYEARLLHFLQE 866 (867)
T ss_pred hHHHHHHHHHhh
Confidence 788888888875
|
|
| >PF10503 Esterase_phd: Esterase PHB depolymerase | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.4e-10 Score=86.64 Aligned_cols=105 Identities=15% Similarity=0.092 Sum_probs=67.3
Q ss_pred CCcEEEeccCCCCCCC----CCcccccCCCCcEEEEecCCCCCCCCC-------CCCCCccchHHHHHHHHHHHHHhCC-
Q 020064 45 GHPVVFLHGGPGGGTT----PSNRRFFDPDFYRIILFDQRGAGKSTP-------HACLDQNTTWDLIDDIEKLRQHLEI- 112 (331)
Q Consensus 45 ~~~vl~~HG~~~~~~~----~~~~~~~~~~g~~vi~~D~~G~G~s~~-------~~~~~~~~~~~~~~~~~~~~~~~~~- 112 (331)
.|.||++||..++... ..+.....+.||-|+.|+......... ......-+...+++.+..+.++.++
T Consensus 16 ~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~~~iD 95 (220)
T PF10503_consen 16 VPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAARYNID 95 (220)
T ss_pred CCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhhcccC
Confidence 4789999997665332 122223335789999998642211110 0000111233344445555555544
Q ss_pred -CcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccc
Q 020064 113 -PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLL 149 (331)
Q Consensus 113 -~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~ 149 (331)
.+|++.|+|.||.++..++..+|+.+.++...++...
T Consensus 96 ~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~~ 133 (220)
T PF10503_consen 96 PSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVPY 133 (220)
T ss_pred CCceeeEEECHHHHHHHHHHHhCCccceEEEeeccccc
Confidence 5899999999999999999999999999988887543
|
|
| >KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.31 E-value=2.7e-11 Score=85.92 Aligned_cols=188 Identities=15% Similarity=0.073 Sum_probs=116.6
Q ss_pred EEEeCCC-CCCCcEEEeccCCCC----CCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHh
Q 020064 36 YWEQSGN-PTGHPVVFLHGGPGG----GTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHL 110 (331)
Q Consensus 36 ~~~~~g~-~~~~~vl~~HG~~~~----~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (331)
....+|+ ...+..||+|||-.. ......+....+.||+|..+++ +.+..... -..++.+...-+..+++..
T Consensus 57 ~VDIwg~~~~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY---~l~~q~ht-L~qt~~~~~~gv~filk~~ 132 (270)
T KOG4627|consen 57 LVDIWGSTNQAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGY---NLCPQVHT-LEQTMTQFTHGVNFILKYT 132 (270)
T ss_pred EEEEecCCCCccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEecc---CcCccccc-HHHHHHHHHHHHHHHHHhc
Confidence 3445664 345788999995322 2335566777789999999864 44442211 1234445555555566666
Q ss_pred CC-CcEEEEEeChhHHHHHHHHHhC-CCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHh
Q 020064 111 EI-PEWQVFGGSWGSTLALAYSLAH-PDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDA 188 (331)
Q Consensus 111 ~~-~~v~lvG~S~Gg~~a~~~a~~~-p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (331)
.. +++.+-|||.|+.+++.+..+- ..+|.|+++.++......... . .
T Consensus 133 ~n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l~EL~~--------------------t----e------- 181 (270)
T KOG4627|consen 133 ENTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDLRELSN--------------------T----E------- 181 (270)
T ss_pred ccceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhhHHHHhC--------------------C----c-------
Confidence 54 4566779999999999887763 448999999887554221000 0 0
Q ss_pred hccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhcccccccc
Q 020064 189 YSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHIN 268 (331)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P 268 (331)
....+. ...+..+.. ..+ ...+..+ +.|
T Consensus 182 ~g~dlg-------------------------Lt~~~ae~~-------------------------Scd-l~~~~~v-~~~ 209 (270)
T KOG4627|consen 182 SGNDLG-------------------------LTERNAESV-------------------------SCD-LWEYTDV-TVW 209 (270)
T ss_pred cccccC-------------------------cccchhhhc-------------------------Ccc-HHHhcCc-eee
Confidence 000000 000000000 111 1245566 599
Q ss_pred EEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcC
Q 020064 269 ATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEP 310 (331)
Q Consensus 269 ~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 310 (331)
+|++.+++|.-.-.+..+.+.+.+..+++..+++.+|+-..+
T Consensus 210 ilVv~~~~espklieQnrdf~~q~~~a~~~~f~n~~hy~I~~ 251 (270)
T KOG4627|consen 210 ILVVAAEHESPKLIEQNRDFADQLRKASFTLFKNYDHYDIIE 251 (270)
T ss_pred eeEeeecccCcHHHHhhhhHHHHhhhcceeecCCcchhhHHH
Confidence 999999999776678888999998889999999999987543
|
|
| >PRK04940 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=8.6e-10 Score=78.57 Aligned_cols=53 Identities=8% Similarity=0.030 Sum_probs=39.6
Q ss_pred ccEEEEecCCCCccCCcchHHHHHhCCCC-cEEEecCCCCCCCcCCchhHHHHHHHHHHH
Q 020064 267 INATIVQGRYDVCCPMMSAWDLHKAWPEA-DFKVVADAGHSANEPGIAAELVATNEKLKN 325 (331)
Q Consensus 267 ~P~l~i~G~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~ 325 (331)
-..+++..+.|++.+...+ .+.+.++ ++++.+|+.|.+. . -++....|.+|++
T Consensus 125 ~r~~vllq~gDEvLDyr~a---~~~y~~~y~~~v~~GGdH~f~--~-fe~~l~~I~~F~~ 178 (180)
T PRK04940 125 DRCLVILSRNDEVLDSQRT---AEELHPYYEIVWDEEQTHKFK--N-ISPHLQRIKAFKT 178 (180)
T ss_pred ccEEEEEeCCCcccCHHHH---HHHhccCceEEEECCCCCCCC--C-HHHHHHHHHHHHh
Confidence 4469999999999986544 3444555 7888999999873 2 5668889999984
|
|
| >PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases | Back alignment and domain information |
|---|
Probab=99.27 E-value=6.2e-11 Score=93.50 Aligned_cols=88 Identities=17% Similarity=0.134 Sum_probs=54.9
Q ss_pred cccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCC---CcEEEEEeChhHHHHHHHHHhC----C
Q 020064 63 NRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEI---PEWQVFGGSWGSTLALAYSLAH----P 135 (331)
Q Consensus 63 ~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~v~lvG~S~Gg~~a~~~a~~~----p 135 (331)
.+..++++||.|+++|+.|.|..........+..-|.+....++....+. .++.++|||.||.-++.++... |
T Consensus 18 ~l~~~L~~GyaVv~pDY~Glg~~y~~~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~l~~~YAp 97 (290)
T PF03583_consen 18 FLAAWLARGYAVVAPDYEGLGTPYLNGRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAAELAPSYAP 97 (290)
T ss_pred HHHHHHHCCCEEEecCCCCCCCcccCcHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHHHHhHHhCc
Confidence 45567789999999999999983322211122222333333333332332 4799999999999887766442 5
Q ss_pred Cc---eeeEEEeccccch
Q 020064 136 DK---VTGLVLRGIFLLR 150 (331)
Q Consensus 136 ~~---v~~li~~~~~~~~ 150 (331)
|. +.+.++.+++...
T Consensus 98 eL~~~l~Gaa~gg~~~dl 115 (290)
T PF03583_consen 98 ELNRDLVGAAAGGPPADL 115 (290)
T ss_pred ccccceeEEeccCCccCH
Confidence 43 7777777765543
|
Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process |
| >COG4099 Predicted peptidase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.1e-10 Score=87.76 Aligned_cols=115 Identities=21% Similarity=0.096 Sum_probs=68.8
Q ss_pred CCCceEEEEeCCC----C--CC-CcEEEeccCCCCCCC-C--------CcccccCCCCcEEEEecCCC-CCCCCCCCCCC
Q 020064 30 SDIHTIYWEQSGN----P--TG-HPVVFLHGGPGGGTT-P--------SNRRFFDPDFYRIILFDQRG-AGKSTPHACLD 92 (331)
Q Consensus 30 ~~g~~l~~~~~g~----~--~~-~~vl~~HG~~~~~~~-~--------~~~~~~~~~g~~vi~~D~~G-~G~s~~~~~~~ 92 (331)
..|.++.|+-+-+ + +- |.|||+||.+..+.. . ..+-..-+.++-|++|.+-- +-.++..+
T Consensus 169 ~tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy~~if~d~e~~t--- 245 (387)
T COG4099 169 STGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQYNPIFADSEEKT--- 245 (387)
T ss_pred ccCceeeEEEecccccCCCCccccEEEEEecCCCCCchhhhhhhcCccceeeecccCceEEEccccccccccccccc---
Confidence 4566777775543 1 22 779999996543322 1 11112223445566666321 22222211
Q ss_pred ccchHHHHHHHH-HHHHHhCC--CcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccc
Q 020064 93 QNTTWDLIDDIE-KLRQHLEI--PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIF 147 (331)
Q Consensus 93 ~~~~~~~~~~~~-~~~~~~~~--~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~ 147 (331)
..-.....+-+. .+.++..+ .+|+++|.|+||.-++.++.++|+.+++.+++++.
T Consensus 246 ~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~ 303 (387)
T COG4099 246 LLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGG 303 (387)
T ss_pred chhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCC
Confidence 112233344444 33445444 48999999999999999999999999999999874
|
|
| >KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.22 E-value=3.8e-10 Score=81.56 Aligned_cols=61 Identities=11% Similarity=0.119 Sum_probs=47.0
Q ss_pred ccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHh
Q 020064 261 IDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNL 326 (331)
Q Consensus 261 l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 326 (331)
...+ ++|.|-|.|+.|.++|...++.+++.+++..++.-| +||++.... ...+.|.+|++.
T Consensus 159 ~~~i-~~PSLHi~G~~D~iv~~~~s~~L~~~~~~a~vl~Hp-ggH~VP~~~---~~~~~i~~fi~~ 219 (230)
T KOG2551|consen 159 KRPL-STPSLHIFGETDTIVPSERSEQLAESFKDATVLEHP-GGHIVPNKA---KYKEKIADFIQS 219 (230)
T ss_pred ccCC-CCCeeEEecccceeecchHHHHHHHhcCCCeEEecC-CCccCCCch---HHHHHHHHHHHH
Confidence 3456 699999999999999999999999999999666666 899986432 344555555544
|
|
| >PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH | Back alignment and domain information |
|---|
Probab=99.22 E-value=2.7e-11 Score=91.22 Aligned_cols=38 Identities=21% Similarity=0.209 Sum_probs=31.9
Q ss_pred CCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccch
Q 020064 112 IPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLR 150 (331)
Q Consensus 112 ~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~ 150 (331)
.++|.|+|.|.||-+|+.+|..+| .|+++|+++|....
T Consensus 21 ~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~~ 58 (213)
T PF08840_consen 21 PDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSVV 58 (213)
T ss_dssp -SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB-
T ss_pred CCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCceeE
Confidence 358999999999999999999999 79999999987654
|
Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B. |
| >KOG2112 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.20 E-value=2.4e-10 Score=82.03 Aligned_cols=175 Identities=17% Similarity=0.125 Sum_probs=108.3
Q ss_pred CCcEEEeccCCCC-CCCCCcccccCCCCcEEEEecCCCCCCCC-----------------CCCCCCccchHHHHHHHHHH
Q 020064 45 GHPVVFLHGGPGG-GTTPSNRRFFDPDFYRIILFDQRGAGKST-----------------PHACLDQNTTWDLIDDIEKL 106 (331)
Q Consensus 45 ~~~vl~~HG~~~~-~~~~~~~~~~~~~g~~vi~~D~~G~G~s~-----------------~~~~~~~~~~~~~~~~~~~~ 106 (331)
..+||++||.+.+ ..|...+..+.-++...|.|.-|-.-.+. .... +.......++.+..+
T Consensus 3 ~atIi~LHglGDsg~~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~-d~~~~~~aa~~i~~L 81 (206)
T KOG2112|consen 3 TATIIFLHGLGDSGSGWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPE-DEEGLHRAADNIANL 81 (206)
T ss_pred eEEEEEEecCCCCCccHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccch-hhhHHHHHHHHHHHH
Confidence 3479999996554 44433333343355555655443211110 0000 123444556666666
Q ss_pred HHHh---C--CCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcch
Q 020064 107 RQHL---E--IPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENE 181 (331)
Q Consensus 107 ~~~~---~--~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (331)
++.. + ..++.+-|.|+||.+++..+..+|..+.+++...+.......
T Consensus 82 i~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p~~~~---------------------------- 133 (206)
T KOG2112|consen 82 IDNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLPRASI---------------------------- 133 (206)
T ss_pred HHHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccccccchh----------------------------
Confidence 6553 2 357999999999999999999998888888877664321000
Q ss_pred hhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhc
Q 020064 182 RSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNI 261 (331)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 261 (331)
. ........
T Consensus 134 ------~-----------------------------------------------------------------~~~~~~~~ 142 (206)
T KOG2112|consen 134 ------G-----------------------------------------------------------------LPGWLPGV 142 (206)
T ss_pred ------h-----------------------------------------------------------------ccCCcccc
Confidence 0 00000000
Q ss_pred cccccccEEEEecCCCCccCCcchHHHHHhC----CCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhh
Q 020064 262 DNIRHINATIVQGRYDVCCPMMSAWDLHKAW----PEADFKVVADAGHSANEPGIAAELVATNEKLKNLI 327 (331)
Q Consensus 262 ~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 327 (331)
. ..|++..||+.|++||....+...+.+ ..++++.+++-+|....++ .+.+..|++++
T Consensus 143 ~---~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~~~~f~~y~g~~h~~~~~e-----~~~~~~~~~~l 204 (206)
T KOG2112|consen 143 N---YTPILLCHGTADPLVPFRFGEKSAQFLKSLGVRVTFKPYPGLGHSTSPQE-----LDDLKSWIKTL 204 (206)
T ss_pred C---cchhheecccCCceeehHHHHHHHHHHHHcCCceeeeecCCccccccHHH-----HHHHHHHHHHh
Confidence 0 389999999999999987666555544 3478899999999986554 56777777664
|
|
| >PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria | Back alignment and domain information |
|---|
Probab=99.19 E-value=5.1e-09 Score=85.43 Aligned_cols=100 Identities=24% Similarity=0.269 Sum_probs=69.1
Q ss_pred CCCcEEEe-----cc-CCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHh-----CC
Q 020064 44 TGHPVVFL-----HG-GPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHL-----EI 112 (331)
Q Consensus 44 ~~~~vl~~-----HG-~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 112 (331)
.++|+|++ || +-+.-.-...+-..+..|+.|+.+.+. ..+. ...+++++......+++.+ +.
T Consensus 67 ~krP~vViDPRAGHGpGIGGFK~dSevG~AL~~GHPvYFV~F~----p~P~---pgQTl~DV~~ae~~Fv~~V~~~hp~~ 139 (581)
T PF11339_consen 67 TKRPFVVIDPRAGHGPGIGGFKPDSEVGVALRAGHPVYFVGFF----PEPE---PGQTLEDVMRAEAAFVEEVAERHPDA 139 (581)
T ss_pred CCCCeEEeCCCCCCCCCccCCCcccHHHHHHHcCCCeEEEEec----CCCC---CCCcHHHHHHHHHHHHHHHHHhCCCC
Confidence 45566666 44 222222233444455679998888765 1222 2467888877777776655 23
Q ss_pred CcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccch
Q 020064 113 PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLR 150 (331)
Q Consensus 113 ~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~ 150 (331)
.|.+|+|-|.||+.++.+|+.+|+.+.-+|+.+++...
T Consensus 140 ~kp~liGnCQgGWa~~mlAA~~Pd~~gplvlaGaPlsy 177 (581)
T PF11339_consen 140 PKPNLIGNCQGGWAAMMLAALRPDLVGPLVLAGAPLSY 177 (581)
T ss_pred CCceEEeccHHHHHHHHHHhcCcCccCceeecCCCccc
Confidence 48999999999999999999999999888888876654
|
Their function is unknown. |
| >PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.9e-11 Score=92.22 Aligned_cols=47 Identities=21% Similarity=0.197 Sum_probs=32.7
Q ss_pred cccccccEEEEecCCCCccCCcchHHHHHhCCC-CcEEEecCCCCCCCcC
Q 020064 262 DNIRHINATIVQGRYDVCCPMMSAWDLHKAWPE-ADFKVVADAGHSANEP 310 (331)
Q Consensus 262 ~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~ 310 (331)
..| ++|+|-|+|++|.+++++.++.+.+.+.+ .+++..+ +||.+...
T Consensus 158 ~~i-~iPtlHv~G~~D~~~~~~~s~~L~~~~~~~~~v~~h~-gGH~vP~~ 205 (212)
T PF03959_consen 158 PKI-SIPTLHVIGENDPVVPPERSEALAEMFDPDARVIEHD-GGHHVPRK 205 (212)
T ss_dssp TT----EEEEEEETT-SSS-HHHHHHHHHHHHHHEEEEEES-SSSS----
T ss_pred ccC-CCCeEEEEeCCCCCcchHHHHHHHHhccCCcEEEEEC-CCCcCcCC
Confidence 345 69999999999999999999999999866 7777776 78887654
|
It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A. |
| >PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT) | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.1e-10 Score=88.37 Aligned_cols=105 Identities=18% Similarity=0.156 Sum_probs=68.0
Q ss_pred CCCcEEEeccCCCCCC-CCCccccc--------CCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHh----
Q 020064 44 TGHPVVFLHGGPGGGT-TPSNRRFF--------DPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHL---- 110 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~-~~~~~~~~--------~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~---- 110 (331)
++.+|||+||..++.. ++.+.... ....+++++.|+......-.... -....+.+.+.+..+++.+
T Consensus 3 ~g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g~~-l~~q~~~~~~~i~~i~~~~~~~~ 81 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFHGRT-LQRQAEFLAEAIKYILELYKSNR 81 (225)
T ss_pred CCCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCcccccccccc-HHHHHHHHHHHHHHHHHhhhhcc
Confidence 6789999999766533 22222222 23468899999876532221110 0112233444555565655
Q ss_pred -CCCcEEEEEeChhHHHHHHHHHhCC---CceeeEEEeccccc
Q 020064 111 -EIPEWQVFGGSWGSTLALAYSLAHP---DKVTGLVLRGIFLL 149 (331)
Q Consensus 111 -~~~~v~lvG~S~Gg~~a~~~a~~~p---~~v~~li~~~~~~~ 149 (331)
+.+++++|||||||.++-.++...+ +.|+++|.+++|..
T Consensus 82 ~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~ 124 (225)
T PF07819_consen 82 PPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHR 124 (225)
T ss_pred CCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCC
Confidence 4578999999999999998887643 57999999998764
|
This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane |
| >COG0657 Aes Esterase/lipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.18 E-value=9.3e-10 Score=88.87 Aligned_cols=102 Identities=27% Similarity=0.159 Sum_probs=71.0
Q ss_pred CCCcEEEeccCCCCCC---C--CCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHh---C--CC
Q 020064 44 TGHPVVFLHGGPGGGT---T--PSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHL---E--IP 113 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~---~--~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~ 113 (331)
+.|+||++|||+.... . ..........|+.|+++|+|-.-+-. ....+++..+.+..+.++. + .+
T Consensus 78 ~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~~-----~p~~~~d~~~a~~~l~~~~~~~g~dp~ 152 (312)
T COG0657 78 TAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEHP-----FPAALEDAYAAYRWLRANAAELGIDPS 152 (312)
T ss_pred CCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCCC-----CCchHHHHHHHHHHHHhhhHhhCCCcc
Confidence 4688999999754322 2 22333344589999999999644332 2345666666666666553 3 56
Q ss_pred cEEEEEeChhHHHHHHHHHhCCC----ceeeEEEeccccch
Q 020064 114 EWQVFGGSWGSTLALAYSLAHPD----KVTGLVLRGIFLLR 150 (331)
Q Consensus 114 ~v~lvG~S~Gg~~a~~~a~~~p~----~v~~li~~~~~~~~ 150 (331)
+|.++|+|.||.+++.++..-.+ ...+.+++.|....
T Consensus 153 ~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~ 193 (312)
T COG0657 153 RIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDL 193 (312)
T ss_pred ceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCC
Confidence 89999999999999999887543 47888888886553
|
|
| >PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=99.16 E-value=9e-09 Score=86.90 Aligned_cols=131 Identities=16% Similarity=0.211 Sum_probs=84.1
Q ss_pred CccceeEeC--CCceEEEEeCC----CCCCCcEEEeccCCCCCCCCCcccc-------------cC------CCCcEEEE
Q 020064 22 YSTGILKVS--DIHTIYWEQSG----NPTGHPVVFLHGGPGGGTTPSNRRF-------------FD------PDFYRIIL 76 (331)
Q Consensus 22 ~~~~~~~~~--~g~~l~~~~~g----~~~~~~vl~~HG~~~~~~~~~~~~~-------------~~------~~g~~vi~ 76 (331)
....++++. .+..++|+-.. +.+.|.||++.||+|+++.+..... +. .+..+++-
T Consensus 11 ~~sGyl~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~an~l~ 90 (415)
T PF00450_consen 11 QYSGYLPVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNKFANLLF 90 (415)
T ss_dssp EEEEEEEECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGGTSEEEE
T ss_pred EEEEEEecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCceeccccccccccCceEEeecccccccccccccccccceEE
Confidence 345678887 66688887553 2456889999999887654211100 00 14578999
Q ss_pred ecCC-CCCCCCCCCCC-CccchHHHHHHHHHHHHHh-------CCCcEEEEEeChhHHHHHHHHHh----C------CCc
Q 020064 77 FDQR-GAGKSTPHACL-DQNTTWDLIDDIEKLRQHL-------EIPEWQVFGGSWGSTLALAYSLA----H------PDK 137 (331)
Q Consensus 77 ~D~~-G~G~s~~~~~~-~~~~~~~~~~~~~~~~~~~-------~~~~v~lvG~S~Gg~~a~~~a~~----~------p~~ 137 (331)
+|.| |.|.|...... ...+.++.++++..++..+ ...+++|.|.|+||..+..+|.. . +-.
T Consensus 91 iD~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~in 170 (415)
T PF00450_consen 91 IDQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKIN 170 (415)
T ss_dssp E--STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSE
T ss_pred EeecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccc
Confidence 9965 99999765432 2346677888887777654 44589999999999887777653 2 235
Q ss_pred eeeEEEeccccchhh
Q 020064 138 VTGLVLRGIFLLRKK 152 (331)
Q Consensus 138 v~~li~~~~~~~~~~ 152 (331)
++|+++.++...+..
T Consensus 171 LkGi~IGng~~dp~~ 185 (415)
T PF00450_consen 171 LKGIAIGNGWIDPRI 185 (415)
T ss_dssp EEEEEEESE-SBHHH
T ss_pred cccceecCccccccc
Confidence 899999998877643
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A .... |
| >PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=99.11 E-value=4.5e-10 Score=83.24 Aligned_cols=101 Identities=17% Similarity=0.080 Sum_probs=69.4
Q ss_pred CCCcEEEeccCC-CCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHH---Hh-------CC
Q 020064 44 TGHPVVFLHGGP-GGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQ---HL-------EI 112 (331)
Q Consensus 44 ~~~~vl~~HG~~-~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~---~~-------~~ 112 (331)
.-|.|+|+||+. .+..|......+.+.||-|+++++-..-. +. ....++..++-+.++.+ .+ +.
T Consensus 45 ~yPVilF~HG~~l~ns~Ys~lL~HIASHGfIVVAPQl~~~~~---p~--~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~~nl 119 (307)
T PF07224_consen 45 TYPVILFLHGFNLYNSFYSQLLAHIASHGFIVVAPQLYTLFP---PD--GQDEIKSAASVINWLPEGLQHVLPENVEANL 119 (307)
T ss_pred CccEEEEeechhhhhHHHHHHHHHHhhcCeEEEechhhcccC---CC--chHHHHHHHHHHHHHHhhhhhhCCCCccccc
Confidence 457899999954 45666778888889999999999875311 21 11122222222222222 22 34
Q ss_pred CcEEEEEeChhHHHHHHHHHhCC--CceeeEEEeccccc
Q 020064 113 PEWQVFGGSWGSTLALAYSLAHP--DKVTGLVLRGIFLL 149 (331)
Q Consensus 113 ~~v~lvG~S~Gg~~a~~~a~~~p--~~v~~li~~~~~~~ 149 (331)
.++.++|||.||-.|..+|..+. -.++++|.++|...
T Consensus 120 ~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G 158 (307)
T PF07224_consen 120 SKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAG 158 (307)
T ss_pred ceEEEeecCCccHHHHHHHhcccccCchhheecccccCC
Confidence 58999999999999999999873 25899999998654
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=99.11 E-value=4.4e-09 Score=80.53 Aligned_cols=106 Identities=16% Similarity=0.139 Sum_probs=60.1
Q ss_pred CCCcEEEeccCCCCCC-CCCcccccC-CCC----cEEEEecCCCC----CCCC---CCC-------CCCccchHHHHHHH
Q 020064 44 TGHPVVFLHGGPGGGT-TPSNRRFFD-PDF----YRIILFDQRGA----GKST---PHA-------CLDQNTTWDLIDDI 103 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~-~~~~~~~~~-~~g----~~vi~~D~~G~----G~s~---~~~-------~~~~~~~~~~~~~~ 103 (331)
+..|.||+||++++.. +..++..+. +.| .-++-++.-|. |.=. ..+ +....++...+..+
T Consensus 10 ~~tPTifihG~~gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~wl 89 (255)
T PF06028_consen 10 STTPTIFIHGYGGTANSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKWL 89 (255)
T ss_dssp S-EEEEEE--TTGGCCCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHHH
T ss_pred CCCcEEEECCCCCChhHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHHH
Confidence 3457999999777644 444444443 322 22333343332 2111 111 10113566677777
Q ss_pred HHHHHHh----CCCcEEEEEeChhHHHHHHHHHhCCC-----ceeeEEEeccccc
Q 020064 104 EKLRQHL----EIPEWQVFGGSWGSTLALAYSLAHPD-----KVTGLVLRGIFLL 149 (331)
Q Consensus 104 ~~~~~~~----~~~~v~lvG~S~Gg~~a~~~a~~~p~-----~v~~li~~~~~~~ 149 (331)
..++..| +.+++.+|||||||..++.++..+.. .+.++|.|+++..
T Consensus 90 ~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfn 144 (255)
T PF06028_consen 90 KKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFN 144 (255)
T ss_dssp HHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TT
T ss_pred HHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccC
Confidence 6666555 67899999999999999999988532 5899999998654
|
; PDB: 3LP5_A 3FLE_A 3DS8_A. |
| >COG4188 Predicted dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.10 E-value=7.7e-10 Score=86.94 Aligned_cols=93 Identities=20% Similarity=0.160 Sum_probs=60.9
Q ss_pred CCCcEEEeccCCCC-CCCCCcccccCCCCcEEEEecCCCC--CCCCCCCCC----CccchHHHHHHHHHHHHH-------
Q 020064 44 TGHPVVFLHGGPGG-GTTPSNRRFFDPDFYRIILFDQRGA--GKSTPHACL----DQNTTWDLIDDIEKLRQH------- 109 (331)
Q Consensus 44 ~~~~vl~~HG~~~~-~~~~~~~~~~~~~g~~vi~~D~~G~--G~s~~~~~~----~~~~~~~~~~~~~~~~~~------- 109 (331)
.-|.|++-||.++. ..+.+..+.+.+.||-|.++|++|- |........ ....+.+-..|+..+++.
T Consensus 70 ~~PlvvlshG~Gs~~~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~s 149 (365)
T COG4188 70 LLPLVVLSHGSGSYVTGFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLTAS 149 (365)
T ss_pred cCCeEEecCCCCCCccchhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHhhcC
Confidence 34778999995444 5567778888899999999999993 333321110 111122333344433332
Q ss_pred ------hCCCcEEEEEeChhHHHHHHHHHhCCC
Q 020064 110 ------LEIPEWQVFGGSWGSTLALAYSLAHPD 136 (331)
Q Consensus 110 ------~~~~~v~lvG~S~Gg~~a~~~a~~~p~ 136 (331)
++..+|.++|||+||+.++.++..+.+
T Consensus 150 P~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~ 182 (365)
T COG4188 150 PALAGRLDPQRVGVLGHSFGGYTAMELAGAELD 182 (365)
T ss_pred cccccccCccceEEEecccccHHHHHhcccccc
Confidence 334589999999999999999876644
|
|
| >KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.10 E-value=1.7e-08 Score=80.35 Aligned_cols=102 Identities=17% Similarity=0.074 Sum_probs=71.4
Q ss_pred CCCcEEEeccCCC---CCC---CCCccccc-CCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHH------h
Q 020064 44 TGHPVVFLHGGPG---GGT---TPSNRRFF-DPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQH------L 110 (331)
Q Consensus 44 ~~~~vl~~HG~~~---~~~---~~~~~~~~-~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~------~ 110 (331)
..|.||++|||+. +.. +..+...+ .+.+..|+++|+|=--+.. ....++|-.+.+..+.++ .
T Consensus 89 ~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh~-----~Pa~y~D~~~Al~w~~~~~~~~~~~ 163 (336)
T KOG1515|consen 89 KLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEHP-----FPAAYDDGWAALKWVLKNSWLKLGA 163 (336)
T ss_pred CceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCCC-----CCccchHHHHHHHHHHHhHHHHhCC
Confidence 3467999999753 211 22333333 3478999999999543333 234567777777766664 3
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhC------CCceeeEEEeccccch
Q 020064 111 EIPEWQVFGGSWGSTLALAYSLAH------PDKVTGLVLRGIFLLR 150 (331)
Q Consensus 111 ~~~~v~lvG~S~Gg~~a~~~a~~~------p~~v~~li~~~~~~~~ 150 (331)
+.++|+|+|-|.||.+|..+|.+. +.+++|.|++-|....
T Consensus 164 D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~ 209 (336)
T KOG1515|consen 164 DPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQG 209 (336)
T ss_pred CcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCC
Confidence 567899999999999999888763 3579999999987653
|
|
| >PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A | Back alignment and domain information |
|---|
Probab=99.09 E-value=1.7e-10 Score=91.20 Aligned_cols=84 Identities=15% Similarity=0.071 Sum_probs=50.5
Q ss_pred ccccCCCCcEEEEecCCCCCCCCCCCCCC---ccchHHHH---------------HHHHHHHHHh------CCCcEEEEE
Q 020064 64 RRFFDPDFYRIILFDQRGAGKSTPHACLD---QNTTWDLI---------------DDIEKLRQHL------EIPEWQVFG 119 (331)
Q Consensus 64 ~~~~~~~g~~vi~~D~~G~G~s~~~~~~~---~~~~~~~~---------------~~~~~~~~~~------~~~~v~lvG 119 (331)
...++++||-|+++|.+|+|+........ .++.+.++ -|...+++.+ +.++|.++|
T Consensus 153 g~~LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~G 232 (390)
T PF12715_consen 153 GDQLAKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMG 232 (390)
T ss_dssp HHHHHTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEE
T ss_pred HHHHHhCCCEEEEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEe
Confidence 34466799999999999999876443211 11222221 1222344444 345899999
Q ss_pred eChhHHHHHHHHHhCCCceeeEEEecccc
Q 020064 120 GSWGSTLALAYSLAHPDKVTGLVLRGIFL 148 (331)
Q Consensus 120 ~S~Gg~~a~~~a~~~p~~v~~li~~~~~~ 148 (331)
+||||..++.+|+..+ +|++.|..+...
T Consensus 233 fSmGg~~a~~LaALDd-RIka~v~~~~l~ 260 (390)
T PF12715_consen 233 FSMGGYRAWWLAALDD-RIKATVANGYLC 260 (390)
T ss_dssp EGGGHHHHHHHHHH-T-T--EEEEES-B-
T ss_pred ecccHHHHHHHHHcch-hhHhHhhhhhhh
Confidence 9999999999999874 898888776543
|
|
| >COG2936 Predicted acyl esterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.03 E-value=2.4e-08 Score=83.66 Aligned_cols=129 Identities=18% Similarity=0.098 Sum_probs=85.7
Q ss_pred CccceeEeCCCceEEEEeC---CCCCCCcEEEeccCCCC------CCCCCccc---ccCCCCcEEEEecCCCCCCCCCCC
Q 020064 22 YSTGILKVSDIHTIYWEQS---GNPTGHPVVFLHGGPGG------GTTPSNRR---FFDPDFYRIILFDQRGAGKSTPHA 89 (331)
Q Consensus 22 ~~~~~~~~~~g~~l~~~~~---g~~~~~~vl~~HG~~~~------~~~~~~~~---~~~~~g~~vi~~D~~G~G~s~~~~ 89 (331)
.....|...||.+|+-..+ +....|+++..+-++-. ........ .++++||.||..|.||.|.|++..
T Consensus 19 ~~~v~V~MRDGvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~SeG~~ 98 (563)
T COG2936 19 ERDVMVPMRDGVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEGVF 98 (563)
T ss_pred eeeeeEEecCCeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCCccc
Confidence 3456788899999985544 33345677777722211 11122333 578899999999999999999765
Q ss_pred CCCcc-chHHHHHHHHHHHHH-hCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccch
Q 020064 90 CLDQN-TTWDLIDDIEKLRQH-LEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLR 150 (331)
Q Consensus 90 ~~~~~-~~~~~~~~~~~~~~~-~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~ 150 (331)
..... ..+|-.+.|..+.++ ....+|..+|.|++|...+.+|+..|..+++++...+....
T Consensus 99 ~~~~~~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D~ 161 (563)
T COG2936 99 DPESSREAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVDR 161 (563)
T ss_pred ceeccccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeeccccccccc
Confidence 32222 222222223222221 12358999999999999999999998889999888876653
|
|
| >PLN02733 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=99.02 E-value=2.6e-10 Score=94.20 Aligned_cols=92 Identities=13% Similarity=-0.044 Sum_probs=69.3
Q ss_pred CCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCc
Q 020064 58 GTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDK 137 (331)
Q Consensus 58 ~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~ 137 (331)
..|..++..+.+.||.+ ..|++|+|.+.+........++++.+.++++.+..+.++++|+||||||.++..++..+|+.
T Consensus 108 ~~~~~li~~L~~~GY~~-~~dL~g~gYDwR~~~~~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~~p~~ 186 (440)
T PLN02733 108 YYFHDMIEQLIKWGYKE-GKTLFGFGYDFRQSNRLPETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSLHSDV 186 (440)
T ss_pred HHHHHHHHHHHHcCCcc-CCCcccCCCCccccccHHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHHCCHh
Confidence 44556777777888755 89999999987654211233455666666666677788999999999999999999988863
Q ss_pred ----eeeEEEeccccch
Q 020064 138 ----VTGLVLRGIFLLR 150 (331)
Q Consensus 138 ----v~~li~~~~~~~~ 150 (331)
|+++|.++++...
T Consensus 187 ~~k~I~~~I~la~P~~G 203 (440)
T PLN02733 187 FEKYVNSWIAIAAPFQG 203 (440)
T ss_pred HHhHhccEEEECCCCCC
Confidence 7899999876554
|
|
| >COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.01 E-value=2.1e-08 Score=76.61 Aligned_cols=100 Identities=13% Similarity=0.074 Sum_probs=77.3
Q ss_pred CcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhC-CCcEEEEEeChhH
Q 020064 46 HPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLE-IPEWQVFGGSWGS 124 (331)
Q Consensus 46 ~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~lvG~S~Gg 124 (331)
|++.++|+..|....+......+.....|+..+.||.|.-... ..+++++++...+-+.... ..+++|+|||+||
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~~~~v~~l~a~g~~~~~~~----~~~l~~~a~~yv~~Ir~~QP~GPy~L~G~S~GG 76 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGPLLPVYGLQAPGYGAGEQP----FASLDDMAAAYVAAIRRVQPEGPYVLLGWSLGG 76 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhccCceeeccccCcccccccc----cCCHHHHHHHHHHHHHHhCCCCCEEEEeecccc
Confidence 5799999976664444433333455699999999999863332 3578999998877777775 4599999999999
Q ss_pred HHHHHHHHhC---CCceeeEEEeccccc
Q 020064 125 TLALAYSLAH---PDKVTGLVLRGIFLL 149 (331)
Q Consensus 125 ~~a~~~a~~~---p~~v~~li~~~~~~~ 149 (331)
.+|...|.+- .+.|..++++++...
T Consensus 77 ~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 77 AVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred HHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 9999999864 457999999998776
|
|
| >PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A | Back alignment and domain information |
|---|
Probab=99.00 E-value=6.8e-10 Score=90.72 Aligned_cols=104 Identities=16% Similarity=0.192 Sum_probs=55.3
Q ss_pred CCCcEEEeccCCCCC-CCCCcccccCCCCcEEEEecCCCCCCC-C-C--CC-----C-------------CC----ccch
Q 020064 44 TGHPVVFLHGGPGGG-TTPSNRRFFDPDFYRIILFDQRGAGKS-T-P--HA-----C-------------LD----QNTT 96 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~-~~~~~~~~~~~~g~~vi~~D~~G~G~s-~-~--~~-----~-------------~~----~~~~ 96 (331)
.-|+|||-||.+++. .+...+..++++||-|+++|+|..-.+ . . .. . .. ....
T Consensus 99 ~~PvvIFSHGlgg~R~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (379)
T PF03403_consen 99 KFPVVIFSHGLGGSRTSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEEEF 178 (379)
T ss_dssp -EEEEEEE--TT--TTTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGGHH
T ss_pred CCCEEEEeCCCCcchhhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchhHH
Confidence 347899999977664 456677889999999999999953211 0 0 00 0 00 0000
Q ss_pred -------HHHHHHHHHHHHHh--------------------------CCCcEEEEEeChhHHHHHHHHHhCCCceeeEEE
Q 020064 97 -------WDLIDDIEKLRQHL--------------------------EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVL 143 (331)
Q Consensus 97 -------~~~~~~~~~~~~~~--------------------------~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~ 143 (331)
+.-++++..+++.+ +.+++.++|||+||..++.++... .++++.|+
T Consensus 179 ~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r~~~~I~ 257 (379)
T PF03403_consen 179 ELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TRFKAGIL 257 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT--EEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cCcceEEE
Confidence 11122333333222 234799999999999999988876 57999999
Q ss_pred ecccc
Q 020064 144 RGIFL 148 (331)
Q Consensus 144 ~~~~~ 148 (331)
+++..
T Consensus 258 LD~W~ 262 (379)
T PF03403_consen 258 LDPWM 262 (379)
T ss_dssp ES---
T ss_pred eCCcc
Confidence 99843
|
|
| >KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.99 E-value=4.2e-09 Score=81.17 Aligned_cols=122 Identities=21% Similarity=0.144 Sum_probs=78.6
Q ss_pred cceeEeCCCc---eEEEEeCCC--CCCC-cEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchH
Q 020064 24 TGILKVSDIH---TIYWEQSGN--PTGH-PVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTW 97 (331)
Q Consensus 24 ~~~~~~~~g~---~l~~~~~g~--~~~~-~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~ 97 (331)
...+.+.||- ++.....++ +++. .||++-|..+--. -.....-++.||.|+.+++||++.|...+.. ..+..
T Consensus 216 R~kiks~dgneiDtmF~d~r~n~~~ngq~LvIC~EGNAGFYE-vG~m~tP~~lgYsvLGwNhPGFagSTG~P~p-~n~~n 293 (517)
T KOG1553|consen 216 RLKIKSSDGNEIDTMFLDGRPNQSGNGQDLVICFEGNAGFYE-VGVMNTPAQLGYSVLGWNHPGFAGSTGLPYP-VNTLN 293 (517)
T ss_pred EEEEeecCCcchhheeecCCCCCCCCCceEEEEecCCccceE-eeeecChHHhCceeeccCCCCccccCCCCCc-ccchH
Confidence 3345555553 334433332 2334 4667666433211 1233334468999999999999999876631 22333
Q ss_pred HHHHHHHHHHHHhCC--CcEEEEEeChhHHHHHHHHHhCCCceeeEEEecccc
Q 020064 98 DLIDDIEKLRQHLEI--PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFL 148 (331)
Q Consensus 98 ~~~~~~~~~~~~~~~--~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~ 148 (331)
.+-..++-.+..++. +.+++.|||.||..+..+|..+|+ |+++|+-++.-
T Consensus 294 A~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPd-VkavvLDAtFD 345 (517)
T KOG1553|consen 294 AADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPD-VKAVVLDATFD 345 (517)
T ss_pred HHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCC-ceEEEeecchh
Confidence 333334445677775 579999999999999999999996 99999887643
|
|
| >PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids [] | Back alignment and domain information |
|---|
Probab=98.91 E-value=1.8e-09 Score=80.57 Aligned_cols=88 Identities=18% Similarity=0.209 Sum_probs=52.3
Q ss_pred CcEEEeccCCC--CCCCCCcccccCCCCcE---EEEecCCCCCCCCCCCC--CCccchHHHHHHHHHHHHHhCCCcEEEE
Q 020064 46 HPVVFLHGGPG--GGTTPSNRRFFDPDFYR---IILFDQRGAGKSTPHAC--LDQNTTWDLIDDIEKLRQHLEIPEWQVF 118 (331)
Q Consensus 46 ~~vl~~HG~~~--~~~~~~~~~~~~~~g~~---vi~~D~~G~G~s~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~lv 118 (331)
.||||+||..+ ...|......|.++||. |+++++-....+..... ....+..++++-|..+++.-+. +|.||
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TGa-kVDIV 80 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTGA-KVDIV 80 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT---EEEE
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhCC-EEEEE
Confidence 47999999554 35577788888899999 89999854433221110 0012234566666677777788 99999
Q ss_pred EeChhHHHHHHHHHhC
Q 020064 119 GGSWGSTLALAYSLAH 134 (331)
Q Consensus 119 G~S~Gg~~a~~~a~~~ 134 (331)
||||||.++-.+....
T Consensus 81 gHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 81 GHSMGGTIARYYIKGG 96 (219)
T ss_dssp EETCHHHHHHHHHHHC
T ss_pred EcCCcCHHHHHHHHHc
Confidence 9999999988887643
|
This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A .... |
| >smart00824 PKS_TE Thioesterase | Back alignment and domain information |
|---|
Probab=98.89 E-value=4.8e-08 Score=74.32 Aligned_cols=80 Identities=15% Similarity=0.073 Sum_probs=58.4
Q ss_pred cccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHH-HHhCCCcEEEEEeChhHHHHHHHHHh---CCCceee
Q 020064 65 RFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLR-QHLEIPEWQVFGGSWGSTLALAYSLA---HPDKVTG 140 (331)
Q Consensus 65 ~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~lvG~S~Gg~~a~~~a~~---~p~~v~~ 140 (331)
...+...+.|+++|.+|++.+.... .+.+++++.+...+ +.....+++++|||+||.++...+.. .++.+.+
T Consensus 19 ~~~l~~~~~v~~~~~~g~~~~~~~~----~~~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~~a~~~a~~l~~~~~~~~~ 94 (212)
T smart00824 19 AAALRGRRDVSALPLPGFGPGEPLP----ASADALVEAQAEAVLRAAGGRPFVLVGHSSGGLLAHAVAARLEARGIPPAA 94 (212)
T ss_pred HHhcCCCccEEEecCCCCCCCCCCC----CCHHHHHHHHHHHHHHhcCCCCeEEEEECHHHHHHHHHHHHHHhCCCCCcE
Confidence 3333567899999999998765432 35666666554443 44445789999999999999988886 3567899
Q ss_pred EEEecccc
Q 020064 141 LVLRGIFL 148 (331)
Q Consensus 141 li~~~~~~ 148 (331)
++++++..
T Consensus 95 l~~~~~~~ 102 (212)
T smart00824 95 VVLLDTYP 102 (212)
T ss_pred EEEEccCC
Confidence 99887644
|
Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa. |
| >PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3 | Back alignment and domain information |
|---|
Probab=98.88 E-value=6.6e-10 Score=88.84 Aligned_cols=106 Identities=15% Similarity=0.126 Sum_probs=61.8
Q ss_pred CCCCcEEEeccCCCCC-C--C-CCccccc-CC--CCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHH----Hh-
Q 020064 43 PTGHPVVFLHGGPGGG-T--T-PSNRRFF-DP--DFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQ----HL- 110 (331)
Q Consensus 43 ~~~~~vl~~HG~~~~~-~--~-~~~~~~~-~~--~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~----~~- 110 (331)
++.|++|++|||.++. . | ......+ .. .++.||++|+...-...-.. .......+.+.+..+++ ..
T Consensus 69 ~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~Y~~--a~~n~~~vg~~la~~l~~L~~~~g 146 (331)
T PF00151_consen 69 PSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNNYPQ--AVANTRLVGRQLAKFLSFLINNFG 146 (331)
T ss_dssp TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-HHH--HHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred CCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccccccc--hhhhHHHHHHHHHHHHHHHHhhcC
Confidence 4678999999987765 2 2 2233333 33 58999999996322110000 00122333344444333 33
Q ss_pred -CCCcEEEEEeChhHHHHHHHHHhCCC--ceeeEEEeccccch
Q 020064 111 -EIPEWQVFGGSWGSTLALAYSLAHPD--KVTGLVLRGIFLLR 150 (331)
Q Consensus 111 -~~~~v~lvG~S~Gg~~a~~~a~~~p~--~v~~li~~~~~~~~ 150 (331)
..++++|+|||+||.+|-.++..... ++..++.++|+.+.
T Consensus 147 ~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP~ 189 (331)
T PF00151_consen 147 VPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGPL 189 (331)
T ss_dssp --GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-TT
T ss_pred CChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCccccc
Confidence 45689999999999999999998877 89999999997764
|
1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A .... |
| >KOG3975 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.82 E-value=3.2e-07 Score=67.77 Aligned_cols=106 Identities=15% Similarity=0.069 Sum_probs=72.1
Q ss_pred CCCCcEEEeccCCCCCCC-CCcccccCC---CCcEEEEecCCCCCCCC---CCC----CCCccchHHHHHHHHHHHHHhC
Q 020064 43 PTGHPVVFLHGGPGGGTT-PSNRRFFDP---DFYRIILFDQRGAGKST---PHA----CLDQNTTWDLIDDIEKLRQHLE 111 (331)
Q Consensus 43 ~~~~~vl~~HG~~~~~~~-~~~~~~~~~---~g~~vi~~D~~G~G~s~---~~~----~~~~~~~~~~~~~~~~~~~~~~ 111 (331)
.+++.+++++|.+|...+ ..+...+.. +.+.++.+-..||-.-+ ... ..+-++++++++.-.++++..-
T Consensus 27 ~~~~li~~IpGNPG~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik~~~ 106 (301)
T KOG3975|consen 27 EDKPLIVWIPGNPGLLGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIKEYV 106 (301)
T ss_pred CCceEEEEecCCCCchhHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHHHhC
Confidence 356778999998887554 333333322 33668888888876443 111 1134678888887777777653
Q ss_pred --CCcEEEEEeChhHHHHHHHHHhCC--CceeeEEEecccc
Q 020064 112 --IPEWQVFGGSWGSTLALAYSLAHP--DKVTGLVLRGIFL 148 (331)
Q Consensus 112 --~~~v~lvG~S~Gg~~a~~~a~~~p--~~v~~li~~~~~~ 148 (331)
..+++++|||-|+++.+....... -.|.+++++-|..
T Consensus 107 Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTI 147 (301)
T KOG3975|consen 107 PKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTI 147 (301)
T ss_pred CCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchH
Confidence 358999999999999999887432 2578888877654
|
|
| >PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised | Back alignment and domain information |
|---|
Probab=98.80 E-value=5.4e-07 Score=71.85 Aligned_cols=127 Identities=17% Similarity=0.105 Sum_probs=76.1
Q ss_pred ccceeEeCCCceEEEEeCC--CCCCCcEEEeccCCCCCCCC----CcccccCCCCcEEEEecCCC--CCCCCC-------
Q 020064 23 STGILKVSDIHTIYWEQSG--NPTGHPVVFLHGGPGGGTTP----SNRRFFDPDFYRIILFDQRG--AGKSTP------- 87 (331)
Q Consensus 23 ~~~~~~~~~g~~l~~~~~g--~~~~~~vl~~HG~~~~~~~~----~~~~~~~~~g~~vi~~D~~G--~G~s~~------- 87 (331)
+...+...+..-+..+... ....-.||++||.+.+..|. .+...+-..|+..+++.+|. ......
T Consensus 63 e~~~L~~~~~~flaL~~~~~~~~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~ 142 (310)
T PF12048_consen 63 EVQWLQAGEERFLALWRPANSAKPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEE 142 (310)
T ss_pred hcEEeecCCEEEEEEEecccCCCCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCC
Confidence 3445555444333333222 11223799999987776663 34455667999999999887 110000
Q ss_pred ---CC--CCCc-------------cc----hHHHHHHHHHH---HHHhCCCcEEEEEeChhHHHHHHHHHhCCC-ceeeE
Q 020064 88 ---HA--CLDQ-------------NT----TWDLIDDIEKL---RQHLEIPEWQVFGGSWGSTLALAYSLAHPD-KVTGL 141 (331)
Q Consensus 88 ---~~--~~~~-------------~~----~~~~~~~~~~~---~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~-~v~~l 141 (331)
.. .... .. .+.+.+-+.++ ....+..+++|+||+.|+..++.+....+. .+.++
T Consensus 143 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daL 222 (310)
T PF12048_consen 143 VPSAGDQQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKPPPMPDAL 222 (310)
T ss_pred CCCCCCCCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCCCcccCeE
Confidence 00 0000 00 11233333333 334455679999999999999999998864 58999
Q ss_pred EEeccccc
Q 020064 142 VLRGIFLL 149 (331)
Q Consensus 142 i~~~~~~~ 149 (331)
|++++...
T Consensus 223 V~I~a~~p 230 (310)
T PF12048_consen 223 VLINAYWP 230 (310)
T ss_pred EEEeCCCC
Confidence 99998544
|
This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes. |
| >PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins | Back alignment and domain information |
|---|
Probab=98.75 E-value=1.5e-06 Score=67.87 Aligned_cols=86 Identities=17% Similarity=0.179 Sum_probs=61.8
Q ss_pred CCCcEEEeccCCCCCCC--------CCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhC----
Q 020064 44 TGHPVVFLHGGPGGGTT--------PSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLE---- 111 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~~--------~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~---- 111 (331)
+...||++-|.++.-.. ..+.......+-+|+.+++||.|.|.+.. +.++++.|-.+.++.+.
T Consensus 136 ~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~-----s~~dLv~~~~a~v~yL~d~~~ 210 (365)
T PF05677_consen 136 PQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPP-----SRKDLVKDYQACVRYLRDEEQ 210 (365)
T ss_pred CCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCC-----CHHHHHHHHHHHHHHHHhccc
Confidence 45678999885443111 11222233478999999999999998665 45788888777776662
Q ss_pred ---CCcEEEEEeChhHHHHHHHHHhC
Q 020064 112 ---IPEWQVFGGSWGSTLALAYSLAH 134 (331)
Q Consensus 112 ---~~~v~lvG~S~Gg~~a~~~a~~~ 134 (331)
.+++++.|||+||.++..++..+
T Consensus 211 G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 211 GPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred CCChheEEEeeccccHHHHHHHHHhc
Confidence 25799999999999999877665
|
|
| >KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.75 E-value=3.1e-08 Score=82.07 Aligned_cols=68 Identities=16% Similarity=0.276 Sum_probs=51.8
Q ss_pred hccccccccEEEEecCCCCccCCcchHHHHHhC-CCCcEEEecCCCCCCCcCC------------chhHHHHHHHHHHHh
Q 020064 260 NIDNIRHINATIVQGRYDVCCPMMSAWDLHKAW-PEADFKVVADAGHSANEPG------------IAAELVATNEKLKNL 326 (331)
Q Consensus 260 ~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~------------~~~~~~~~i~~fl~~ 326 (331)
.+-.+ +.|+||+.|.+|..++++..+.+.++. ...+++++.+++|.+-... .-..++++|.+|+..
T Consensus 299 ~Lldm-k~PVLFV~Gsnd~mcspn~ME~vreKMqA~~elhVI~~adhsmaipk~k~esegltqseVd~~i~~aI~efvt~ 377 (784)
T KOG3253|consen 299 ALLDM-KQPVLFVIGSNDHMCSPNSMEEVREKMQAEVELHVIGGADHSMAIPKRKVESEGLTQSEVDSAIAQAIKEFVTI 377 (784)
T ss_pred hhHhc-CCceEEEecCCcccCCHHHHHHHHHHhhccceEEEecCCCccccCCccccccccccHHHHHHHHHHHHHHHHHH
Confidence 45556 599999999999999999999999988 4688999999999874321 123356666666665
Q ss_pred hh
Q 020064 327 IK 328 (331)
Q Consensus 327 ~~ 328 (331)
.+
T Consensus 378 ~l 379 (784)
T KOG3253|consen 378 AL 379 (784)
T ss_pred hh
Confidence 44
|
|
| >PLN02209 serine carboxypeptidase | Back alignment and domain information |
|---|
Probab=98.69 E-value=1.3e-05 Score=67.14 Aligned_cols=129 Identities=19% Similarity=0.274 Sum_probs=77.6
Q ss_pred CccceeEeCC--CceEEEEeCC----CCCCCcEEEeccCCCCCCCCC-------cc-c---------ccC------CCCc
Q 020064 22 YSTGILKVSD--IHTIYWEQSG----NPTGHPVVFLHGGPGGGTTPS-------NR-R---------FFD------PDFY 72 (331)
Q Consensus 22 ~~~~~~~~~~--g~~l~~~~~g----~~~~~~vl~~HG~~~~~~~~~-------~~-~---------~~~------~~g~ 72 (331)
....++++.+ +..++|+-.. +.+.|.|+++.||+|.+.... .. . .+. .+-.
T Consensus 39 ~~sGy~~v~~~~~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~a 118 (437)
T PLN02209 39 LETGYIGIGEEENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTA 118 (437)
T ss_pred EEEEEEEecCCCCeEEEEEEEecCCCCCCCCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCCchhhcC
Confidence 3456777754 4567765433 234688999999987654321 10 0 111 1446
Q ss_pred EEEEecC-CCCCCCCCCCCCCccchHHHHHHHHHHHHH----h---CCCcEEEEEeChhHHHHHHHHHhC----------
Q 020064 73 RIILFDQ-RGAGKSTPHACLDQNTTWDLIDDIEKLRQH----L---EIPEWQVFGGSWGSTLALAYSLAH---------- 134 (331)
Q Consensus 73 ~vi~~D~-~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~----~---~~~~v~lvG~S~Gg~~a~~~a~~~---------- 134 (331)
+++-+|. .|.|.|.........+.++.++++..++.. . ...+++|.|.|+||..+..+|..-
T Consensus 119 nllfiDqPvGtGfSy~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~ 198 (437)
T PLN02209 119 NIIFLDQPVGSGFSYSKTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNP 198 (437)
T ss_pred cEEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCC
Confidence 7999995 488988643321112222334555555443 2 235899999999998777666531
Q ss_pred CCceeeEEEeccccch
Q 020064 135 PDKVTGLVLRGIFLLR 150 (331)
Q Consensus 135 p~~v~~li~~~~~~~~ 150 (331)
+-.++|+++.++...+
T Consensus 199 ~inl~Gi~igng~td~ 214 (437)
T PLN02209 199 PINLQGYVLGNPITHI 214 (437)
T ss_pred ceeeeeEEecCcccCh
Confidence 1257899998886654
|
|
| >PLN03016 sinapoylglucose-malate O-sinapoyltransferase | Back alignment and domain information |
|---|
Probab=98.67 E-value=7.9e-06 Score=68.29 Aligned_cols=130 Identities=18% Similarity=0.234 Sum_probs=77.0
Q ss_pred CCccceeEeCC--CceEEEEeCC----CCCCCcEEEeccCCCCCCCC-------Ccc----------cccC------CCC
Q 020064 21 PYSTGILKVSD--IHTIYWEQSG----NPTGHPVVFLHGGPGGGTTP-------SNR----------RFFD------PDF 71 (331)
Q Consensus 21 ~~~~~~~~~~~--g~~l~~~~~g----~~~~~~vl~~HG~~~~~~~~-------~~~----------~~~~------~~g 71 (331)
.....++++.+ +..++|+-.. +.+.|.||++.||+|.+... ... ..+. .+-
T Consensus 36 ~~~sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~ 115 (433)
T PLN03016 36 ELETGYIGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKM 115 (433)
T ss_pred eEEEEEEEecCCCCeEEEEEEEecCCCcccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhhc
Confidence 34467888864 4567776432 23568899999998754421 110 0111 145
Q ss_pred cEEEEecC-CCCCCCCCCCCCCccchHHHHHHHHHHHH----Hh---CCCcEEEEEeChhHHHHHHHHHhC---------
Q 020064 72 YRIILFDQ-RGAGKSTPHACLDQNTTWDLIDDIEKLRQ----HL---EIPEWQVFGGSWGSTLALAYSLAH--------- 134 (331)
Q Consensus 72 ~~vi~~D~-~G~G~s~~~~~~~~~~~~~~~~~~~~~~~----~~---~~~~v~lvG~S~Gg~~a~~~a~~~--------- 134 (331)
..++-+|. -|.|.|.........+-.+.++++..++. .. ...+++|.|.|+||..+..+|..-
T Consensus 116 anllfiDqPvGtGfSy~~~~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~ 195 (433)
T PLN03016 116 ANIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCE 195 (433)
T ss_pred CcEEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccC
Confidence 78999995 58998864331111111122344444433 32 335899999999998777666531
Q ss_pred -CCceeeEEEeccccch
Q 020064 135 -PDKVTGLVLRGIFLLR 150 (331)
Q Consensus 135 -p~~v~~li~~~~~~~~ 150 (331)
+-.++|+++-++...+
T Consensus 196 ~~inLkGi~iGNg~t~~ 212 (433)
T PLN03016 196 PPINLQGYMLGNPVTYM 212 (433)
T ss_pred CcccceeeEecCCCcCc
Confidence 1257899998886543
|
|
| >COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.66 E-value=5.9e-07 Score=68.45 Aligned_cols=125 Identities=22% Similarity=0.214 Sum_probs=80.2
Q ss_pred ccceeEeCCCceEEEE---eCCCCC-CCcEEEeccCCCCCC-C---CCcccccCCCCcEEEEecCC-------CCCCCCC
Q 020064 23 STGILKVSDIHTIYWE---QSGNPT-GHPVVFLHGGPGGGT-T---PSNRRFFDPDFYRIILFDQR-------GAGKSTP 87 (331)
Q Consensus 23 ~~~~~~~~~g~~l~~~---~~g~~~-~~~vl~~HG~~~~~~-~---~~~~~~~~~~g~~vi~~D~~-------G~G~s~~ 87 (331)
+...+..+++ +..|+ ..+.++ .|.||.+||..++.. . ..+-......||-|+.+|-- +.|.+..
T Consensus 36 ~~~s~~~~g~-~r~y~l~vP~g~~~~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~ 114 (312)
T COG3509 36 SVASFDVNGL-KRSYRLYVPPGLPSGAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFG 114 (312)
T ss_pred CccccccCCC-ccceEEEcCCCCCCCCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcCccccccCCCcccccCC
Confidence 3455566555 44433 333333 357899999665532 2 12223333589999999532 2233321
Q ss_pred CC--CCCccchHHHHHHHHHHHHHhCCC--cEEEEEeChhHHHHHHHHHhCCCceeeEEEecccc
Q 020064 88 HA--CLDQNTTWDLIDDIEKLRQHLEIP--EWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFL 148 (331)
Q Consensus 88 ~~--~~~~~~~~~~~~~~~~~~~~~~~~--~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~ 148 (331)
+. .....+...+.+.+..++.+.+++ +|++.|.|-||.++..++..+|+.+.++..+++..
T Consensus 115 p~~~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 115 PADRRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred cccccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 21 112234455666667777777776 89999999999999999999999999999888755
|
|
| >KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.66 E-value=2.6e-05 Score=64.80 Aligned_cols=132 Identities=16% Similarity=0.159 Sum_probs=82.6
Q ss_pred CCCccceeEeC--CCceEEEEeCC----CCCCCcEEEeccCCCCCCCCCccccc----C--------------CCCcEEE
Q 020064 20 EPYSTGILKVS--DIHTIYWEQSG----NPTGHPVVFLHGGPGGGTTPSNRRFF----D--------------PDFYRII 75 (331)
Q Consensus 20 ~~~~~~~~~~~--~g~~l~~~~~g----~~~~~~vl~~HG~~~~~~~~~~~~~~----~--------------~~g~~vi 75 (331)
......++.++ .++.++|+-.. +.+.|.||.+.||+|-+.......++ . .+--.++
T Consensus 42 f~~ysGYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiL 121 (454)
T KOG1282|consen 42 FKQYSGYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLGGLFEENGPFRVKYNGKTLYLNPYSWNKEANIL 121 (454)
T ss_pred cccccceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchhhhhhhcCCeEEcCCCCcceeCCccccccccEE
Confidence 34446788887 57789887443 34578899999998754432111110 0 1335688
Q ss_pred EecCC-CCCCCCCCCCC-CccchHHHHHHHHHHHH----Hh---CCCcEEEEEeChhHHHHHHHHHh----C------CC
Q 020064 76 LFDQR-GAGKSTPHACL-DQNTTWDLIDDIEKLRQ----HL---EIPEWQVFGGSWGSTLALAYSLA----H------PD 136 (331)
Q Consensus 76 ~~D~~-G~G~s~~~~~~-~~~~~~~~~~~~~~~~~----~~---~~~~v~lvG~S~Gg~~a~~~a~~----~------p~ 136 (331)
-+|.| |.|.|-..... ...+-+..++|...++. +. ..++++|.|-|++|...-.+|.. . +-
T Consensus 122 fLd~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~i 201 (454)
T KOG1282|consen 122 FLDQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNI 201 (454)
T ss_pred EEecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcc
Confidence 88888 78888644321 11244455566555443 22 34689999999999877777653 1 12
Q ss_pred ceeeEEEeccccchh
Q 020064 137 KVTGLVLRGIFLLRK 151 (331)
Q Consensus 137 ~v~~li~~~~~~~~~ 151 (331)
.++|+++-++.....
T Consensus 202 NLkG~~IGNg~td~~ 216 (454)
T KOG1282|consen 202 NLKGYAIGNGLTDPE 216 (454)
T ss_pred cceEEEecCcccCcc
Confidence 578998888876644
|
|
| >KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.66 E-value=2.2e-07 Score=67.31 Aligned_cols=100 Identities=20% Similarity=0.253 Sum_probs=71.6
Q ss_pred CcEEEeccCCCCC----CCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCC----CcEEE
Q 020064 46 HPVVFLHGGPGGG----TTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEI----PEWQV 117 (331)
Q Consensus 46 ~~vl~~HG~~~~~----~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~v~l 117 (331)
..|||+-|.+..- ....+..++.+.+|.++-+.++.+- ..+...++.+-++|+..++++++. ..|+|
T Consensus 37 ~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy-----~G~Gt~slk~D~edl~~l~~Hi~~~~fSt~vVL 111 (299)
T KOG4840|consen 37 VKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSY-----NGYGTFSLKDDVEDLKCLLEHIQLCGFSTDVVL 111 (299)
T ss_pred EEEEEEcccCCCccccccHHHHHHHHhhccceeeeeeccccc-----cccccccccccHHHHHHHHHHhhccCcccceEE
Confidence 4588888855432 2245677778899999999887421 111234677778999999998753 37999
Q ss_pred EEeChhHHHHHHHHHh--CCCceeeEEEeccccch
Q 020064 118 FGGSWGSTLALAYSLA--HPDKVTGLVLRGIFLLR 150 (331)
Q Consensus 118 vG~S~Gg~~a~~~a~~--~p~~v~~li~~~~~~~~ 150 (331)
+|||.|+.=.+.+... .+..+.+.|+.+|....
T Consensus 112 ~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSDr 146 (299)
T KOG4840|consen 112 VGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSDR 146 (299)
T ss_pred EecCccchHHHHHHHhccchHHHHHHHHhCccchh
Confidence 9999999988888743 35568888888876653
|
|
| >COG3150 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.64 E-value=3.2e-07 Score=63.35 Aligned_cols=90 Identities=21% Similarity=0.171 Sum_probs=62.4
Q ss_pred EEEeccCCCCCCCCC--cccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCcEEEEEeChhHH
Q 020064 48 VVFLHGGPGGGTTPS--NRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGST 125 (331)
Q Consensus 48 vl~~HG~~~~~~~~~--~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~ 125 (331)
||++|||-+|..... ....+.. .|.|-.+.+.+.. ..+....++.+..++...+.+...|+|-|+||+
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~-------~~~~~i~y~~p~l---~h~p~~a~~ele~~i~~~~~~~p~ivGssLGGY 71 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFID-------EDVRDIEYSTPHL---PHDPQQALKELEKAVQELGDESPLIVGSSLGGY 71 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHh-------ccccceeeecCCC---CCCHHHHHHHHHHHHHHcCCCCceEEeecchHH
Confidence 899999877755432 1222222 2333333343332 346788899999999999988899999999999
Q ss_pred HHHHHHHhCCCceeeEEEeccccch
Q 020064 126 LALAYSLAHPDKVTGLVLRGIFLLR 150 (331)
Q Consensus 126 ~a~~~a~~~p~~v~~li~~~~~~~~ 150 (331)
.|..++.++. ++ .|+++|...+
T Consensus 72 ~At~l~~~~G--ir-av~~NPav~P 93 (191)
T COG3150 72 YATWLGFLCG--IR-AVVFNPAVRP 93 (191)
T ss_pred HHHHHHHHhC--Ch-hhhcCCCcCc
Confidence 9999999985 44 4556776654
|
|
| >PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella | Back alignment and domain information |
|---|
Probab=98.62 E-value=1.6e-06 Score=69.90 Aligned_cols=67 Identities=22% Similarity=0.222 Sum_probs=56.1
Q ss_pred hhccccccccEEEEecCCCCccCCcchHHHHHhCCC-CcEEEecCCCCCCCcCCchhHHHHHHHHHHHhhhcC
Q 020064 259 DNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPE-ADFKVVADAGHSANEPGIAAELVATNEKLKNLIKNG 330 (331)
Q Consensus 259 ~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~~~ 330 (331)
....++ ++|.++|.|..|++..+.....+.+.+|+ ..+..+|+++|.... ..+.+.|..|+..+..+
T Consensus 256 ~Y~~rL-~~PK~ii~atgDeFf~pD~~~~y~d~L~G~K~lr~vPN~~H~~~~----~~~~~~l~~f~~~~~~~ 323 (367)
T PF10142_consen 256 SYRDRL-TMPKYIINATGDEFFVPDSSNFYYDKLPGEKYLRYVPNAGHSLIG----SDVVQSLRAFYNRIQNG 323 (367)
T ss_pred HHHHhc-CccEEEEecCCCceeccCchHHHHhhCCCCeeEEeCCCCCcccch----HHHHHHHHHHHHHHHcC
Confidence 344666 69999999999999999999999999985 667888999999854 56788899999887544
|
Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily. |
| >PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins | Back alignment and domain information |
|---|
Probab=98.61 E-value=2.3e-06 Score=63.25 Aligned_cols=81 Identities=17% Similarity=0.025 Sum_probs=51.3
Q ss_pred CCcEEEeccCCCCCCCCCcccccCCCCcE-EEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCcEEEEEeChh
Q 020064 45 GHPVVFLHGGPGGGTTPSNRRFFDPDFYR-IILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWG 123 (331)
Q Consensus 45 ~~~vl~~HG~~~~~~~~~~~~~~~~~g~~-vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG~S~G 123 (331)
+..|||..||+.+........ +..++. ++++|+|..- ++. | --+.+++.|||+|||
T Consensus 11 ~~LilfF~GWg~d~~~f~hL~--~~~~~D~l~~yDYr~l~------------~d~---~------~~~y~~i~lvAWSmG 67 (213)
T PF04301_consen 11 KELILFFAGWGMDPSPFSHLI--LPENYDVLICYDYRDLD------------FDF---D------LSGYREIYLVAWSMG 67 (213)
T ss_pred CeEEEEEecCCCChHHhhhcc--CCCCccEEEEecCcccc------------ccc---c------cccCceEEEEEEeHH
Confidence 467899999877655433221 123444 5677887321 110 1 124579999999999
Q ss_pred HHHHHHHHHhCCCceeeEEEeccccch
Q 020064 124 STLALAYSLAHPDKVTGLVLRGIFLLR 150 (331)
Q Consensus 124 g~~a~~~a~~~p~~v~~li~~~~~~~~ 150 (331)
-++|..+....| ++..|++++...+
T Consensus 68 Vw~A~~~l~~~~--~~~aiAINGT~~P 92 (213)
T PF04301_consen 68 VWAANRVLQGIP--FKRAIAINGTPYP 92 (213)
T ss_pred HHHHHHHhccCC--cceeEEEECCCCC
Confidence 999988866543 6777777765543
|
|
| >PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=98.60 E-value=1.1e-07 Score=72.72 Aligned_cols=105 Identities=13% Similarity=0.044 Sum_probs=65.3
Q ss_pred CCCcEEEeccCCCCCCC--CC--cccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHH----hCCCcE
Q 020064 44 TGHPVVFLHGGPGGGTT--PS--NRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQH----LEIPEW 115 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~~--~~--~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~v 115 (331)
++..+||+||+..+... .. .+...+...-.++.+.||+.|.-..... ...+...-..++..+++. .+.++|
T Consensus 17 ~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~-d~~~a~~s~~~l~~~L~~L~~~~~~~~I 95 (233)
T PF05990_consen 17 DKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFY-DRESARFSGPALARFLRDLARAPGIKRI 95 (233)
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhh-hhhhHHHHHHHHHHHHHHHHhccCCceE
Confidence 57789999998665221 11 1122222222899999998876322111 112333334445555544 356799
Q ss_pred EEEEeChhHHHHHHHHHhC----C-----CceeeEEEeccccc
Q 020064 116 QVFGGSWGSTLALAYSLAH----P-----DKVTGLVLRGIFLL 149 (331)
Q Consensus 116 ~lvG~S~Gg~~a~~~a~~~----p-----~~v~~li~~~~~~~ 149 (331)
+|++||||+.+.+.+.... + .++..+|+++|-..
T Consensus 96 ~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid 138 (233)
T PF05990_consen 96 HILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDID 138 (233)
T ss_pred EEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCC
Confidence 9999999999999886542 1 26788999887554
|
|
| >PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters | Back alignment and domain information |
|---|
Probab=98.54 E-value=1.2e-06 Score=70.36 Aligned_cols=105 Identities=18% Similarity=0.153 Sum_probs=70.5
Q ss_pred CCCcEEEeccCCCCCCCCC-------cccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCcEE
Q 020064 44 TGHPVVFLHGGPGGGTTPS-------NRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQ 116 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~~~~-------~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 116 (331)
+.|.||++|||+-.-.... ....++. ...+++.|+.-...... ....+..+.+.++....+++..|.++|+
T Consensus 121 ~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~-~~SILvLDYsLt~~~~~-~~~yPtQL~qlv~~Y~~Lv~~~G~~nI~ 198 (374)
T PF10340_consen 121 SDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP-EVSILVLDYSLTSSDEH-GHKYPTQLRQLVATYDYLVESEGNKNII 198 (374)
T ss_pred CCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC-CCeEEEEeccccccccC-CCcCchHHHHHHHHHHHHHhccCCCeEE
Confidence 4688999999764322111 1111222 55899999875431111 1112356778888888889888999999
Q ss_pred EEEeChhHHHHHHHHHhC--C---CceeeEEEeccccch
Q 020064 117 VFGGSWGSTLALAYSLAH--P---DKVTGLVLRGIFLLR 150 (331)
Q Consensus 117 lvG~S~Gg~~a~~~a~~~--p---~~v~~li~~~~~~~~ 150 (331)
|+|-|.||.+++.+++.. + ...+++|+++|....
T Consensus 199 LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l 237 (374)
T PF10340_consen 199 LMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNL 237 (374)
T ss_pred EEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCC
Confidence 999999999999887542 1 236899999997654
|
In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved []. |
| >PRK10439 enterobactin/ferric enterobactin esterase; Provisional | Back alignment and domain information |
|---|
Probab=98.47 E-value=6.3e-07 Score=74.43 Aligned_cols=103 Identities=14% Similarity=0.105 Sum_probs=62.2
Q ss_pred CCCcEEEeccCC--CCCCCCCcccccCCCC----cEEEEecCCCC-CCCCCCCCCCccchHHHHHHHHHHHHHh-----C
Q 020064 44 TGHPVVFLHGGP--GGGTTPSNRRFFDPDF----YRIILFDQRGA-GKSTPHACLDQNTTWDLIDDIEKLRQHL-----E 111 (331)
Q Consensus 44 ~~~~vl~~HG~~--~~~~~~~~~~~~~~~g----~~vi~~D~~G~-G~s~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 111 (331)
.-|+|+++||.. ........+..+.+.| ..++.+|..+. .++..... ...-...+++++.-.+++. +
T Consensus 208 ~~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~~R~~el~~-~~~f~~~l~~eLlP~I~~~y~~~~d 286 (411)
T PRK10439 208 ERPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAIDTTHRSQELPC-NADFWLAVQQELLPQVRAIAPFSDD 286 (411)
T ss_pred CCCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCCcccccccCCc-hHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 347788999943 2222222333333444 34677775321 11111110 1111233456665556543 3
Q ss_pred CCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccc
Q 020064 112 IPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIF 147 (331)
Q Consensus 112 ~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~ 147 (331)
.++.+|+|+||||+.++.++.++|+++.+++.+++.
T Consensus 287 ~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs 322 (411)
T PRK10439 287 ADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGS 322 (411)
T ss_pred ccceEEEEEChHHHHHHHHHHhCcccccEEEEeccc
Confidence 357899999999999999999999999999999975
|
|
| >PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins | Back alignment and domain information |
|---|
Probab=98.47 E-value=2.9e-06 Score=65.79 Aligned_cols=59 Identities=8% Similarity=-0.004 Sum_probs=50.7
Q ss_pred cccEEEEecCCCCccCCcchHHHHHhCC----CCcEEEecCCCCCCCcCCchhHHHHHHHHHH
Q 020064 266 HINATIVQGRYDVCCPMMSAWDLHKAWP----EADFKVVADAGHSANEPGIAAELVATNEKLK 324 (331)
Q Consensus 266 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl 324 (331)
.+|-|+++++.|.+++.+..+++.+... +++...++++.|..|....|+++.+.+.+|+
T Consensus 178 ~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 178 RCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred CCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 4899999999999999988887776552 3677788999999998777999999999985
|
|
| >COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.46 E-value=5.8e-07 Score=72.75 Aligned_cols=103 Identities=17% Similarity=0.154 Sum_probs=76.2
Q ss_pred CCcEEEeccCCCC-CCCCCcccccCCCCcE---EEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCcEEEEEe
Q 020064 45 GHPVVFLHGGPGG-GTTPSNRRFFDPDFYR---IILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGG 120 (331)
Q Consensus 45 ~~~vl~~HG~~~~-~~~~~~~~~~~~~g~~---vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG~ 120 (331)
.-+++++||+..+ ..+......+...|+. ++.+++++-. .... .....+.+...+.+++...+.+++.++||
T Consensus 59 ~~pivlVhG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~---~~~~~~ql~~~V~~~l~~~ga~~v~LigH 134 (336)
T COG1075 59 KEPIVLVHGLGGGYGNFLPLDYRLAILGWLTNGVYAFELSGGD-GTYS---LAVRGEQLFAYVDEVLAKTGAKKVNLIGH 134 (336)
T ss_pred CceEEEEccCcCCcchhhhhhhhhcchHHHhcccccccccccC-CCcc---ccccHHHHHHHHHHHHhhcCCCceEEEee
Confidence 3489999996444 3344444445556776 8888888651 1111 23456677778888888888899999999
Q ss_pred ChhHHHHHHHHHhCC--CceeeEEEeccccchh
Q 020064 121 SWGSTLALAYSLAHP--DKVTGLVLRGIFLLRK 151 (331)
Q Consensus 121 S~Gg~~a~~~a~~~p--~~v~~li~~~~~~~~~ 151 (331)
||||..+..++...+ .+|+.++.++++-...
T Consensus 135 S~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~Gt 167 (336)
T COG1075 135 SMGGLDSRYYLGVLGGANRVASVVTLGTPHHGT 167 (336)
T ss_pred cccchhhHHHHhhcCccceEEEEEEeccCCCCc
Confidence 999999999999887 7999999999876543
|
|
| >cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc | Back alignment and domain information |
|---|
Probab=98.45 E-value=1.2e-06 Score=75.72 Aligned_cols=105 Identities=13% Similarity=0.036 Sum_probs=65.4
Q ss_pred CCCcEEEeccCCCC---CCCCCcccccCC-C-CcEEEEecCC----CCCCCCCCCCCCccchHHHHHHHHHHHH---HhC
Q 020064 44 TGHPVVFLHGGPGG---GTTPSNRRFFDP-D-FYRIILFDQR----GAGKSTPHACLDQNTTWDLIDDIEKLRQ---HLE 111 (331)
Q Consensus 44 ~~~~vl~~HG~~~~---~~~~~~~~~~~~-~-g~~vi~~D~~----G~G~s~~~~~~~~~~~~~~~~~~~~~~~---~~~ 111 (331)
+.|+||++|||+.. .... ....+.. . ++.|+.+++| |+..+.........-+.|+...+..+.+ .+|
T Consensus 94 ~~pv~v~ihGG~~~~g~~~~~-~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~D~~~al~wv~~~i~~fg 172 (493)
T cd00312 94 SLPVMVWIHGGGFMFGSGSLY-PGDGLAREGDNVIVVSINYRLGVLGFLSTGDIELPGNYGLKDQRLALKWVQDNIAAFG 172 (493)
T ss_pred CCCEEEEEcCCccccCCCCCC-ChHHHHhcCCCEEEEEecccccccccccCCCCCCCcchhHHHHHHHHHHHHHHHHHhC
Confidence 45789999996532 2222 2223333 3 3999999999 3333322111123345566555555544 444
Q ss_pred --CCcEEEEEeChhHHHHHHHHHhC--CCceeeEEEeccccc
Q 020064 112 --IPEWQVFGGSWGSTLALAYSLAH--PDKVTGLVLRGIFLL 149 (331)
Q Consensus 112 --~~~v~lvG~S~Gg~~a~~~a~~~--p~~v~~li~~~~~~~ 149 (331)
.++|.|+|+|.||..+..++... +..++++|+.++...
T Consensus 173 gd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 173 GDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred CCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 45899999999999998887762 446888998886543
|
) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate. |
| >COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.44 E-value=2.9e-06 Score=70.93 Aligned_cols=130 Identities=19% Similarity=0.103 Sum_probs=88.8
Q ss_pred CCCCccceeEeCCCceEEEEeCC----CCCCCcEEEeccCCCC---CCCCCcccccCCCCcEEEEecCCCCCCCCCCC--
Q 020064 19 VEPYSTGILKVSDIHTIYWEQSG----NPTGHPVVFLHGGPGG---GTTPSNRRFFDPDFYRIILFDQRGAGKSTPHA-- 89 (331)
Q Consensus 19 ~~~~~~~~~~~~~g~~l~~~~~g----~~~~~~vl~~HG~~~~---~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~-- 89 (331)
....+..+.++.||.+|.|...+ ..+.|++|+--||.+- ..+.......+++|...+..+.||-|+=.+.=
T Consensus 391 ~~~veQ~~atSkDGT~IPYFiv~K~~~~d~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~WH~ 470 (648)
T COG1505 391 NYEVEQFFATSKDGTRIPYFIVRKGAKKDENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFGPEWHQ 470 (648)
T ss_pred CceEEEEEEEcCCCccccEEEEecCCcCCCCceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccCCccCHHHHH
Confidence 34555667777899999887663 2246777777775543 44555557788999999999999977654210
Q ss_pred ----CCCccchHHHHHHHHHHHHHh--CCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEecccc
Q 020064 90 ----CLDQNTTWDLIDDIEKLRQHL--EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFL 148 (331)
Q Consensus 90 ----~~~~~~~~~~~~~~~~~~~~~--~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~ 148 (331)
...+..++|+++..+.++++= ..+++.+.|-|-||++.-.+..++|+.+.++|+--|..
T Consensus 471 Aa~k~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPll 535 (648)
T COG1505 471 AGMKENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPLL 535 (648)
T ss_pred HHhhhcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccchh
Confidence 112234455555555544431 23578999999999999999999999888777665544
|
|
| >COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.43 E-value=7.4e-06 Score=60.99 Aligned_cols=103 Identities=23% Similarity=0.312 Sum_probs=63.2
Q ss_pred cEEEeccCCCCCCC-CCcccccCCCC-----cEEEEecCCCC----CCCCCCC---------CCCccchHHHHHHHHHHH
Q 020064 47 PVVFLHGGPGGGTT-PSNRRFFDPDF-----YRIILFDQRGA----GKSTPHA---------CLDQNTTWDLIDDIEKLR 107 (331)
Q Consensus 47 ~vl~~HG~~~~~~~-~~~~~~~~~~g-----~~vi~~D~~G~----G~s~~~~---------~~~~~~~~~~~~~~~~~~ 107 (331)
|.||+||.+++... ...+..+...+ --++.+|--|- |.=+... .....+..++...+..++
T Consensus 47 PTIfIhGsgG~asS~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~~m 126 (288)
T COG4814 47 PTIFIHGSGGTASSLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKKAM 126 (288)
T ss_pred ceEEEecCCCChhHHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHHHH
Confidence 68999997776443 34444443322 23555565551 1111110 001234455566665555
Q ss_pred H----HhCCCcEEEEEeChhHHHHHHHHHhCCC-----ceeeEEEeccccc
Q 020064 108 Q----HLEIPEWQVFGGSWGSTLALAYSLAHPD-----KVTGLVLRGIFLL 149 (331)
Q Consensus 108 ~----~~~~~~v~lvG~S~Gg~~a~~~a~~~p~-----~v~~li~~~~~~~ 149 (331)
. +.+++++.+|||||||.-...++..+.+ .+.++|.++++..
T Consensus 127 syL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 127 SYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 4 4577899999999999999999987632 4889999987653
|
|
| >PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=98.42 E-value=8.6e-07 Score=58.24 Aligned_cols=60 Identities=17% Similarity=0.170 Sum_probs=53.0
Q ss_pred cccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHh
Q 020064 266 HINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNL 326 (331)
Q Consensus 266 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 326 (331)
..|+|++.++.|+++|.+.++.+++.+++++++++++.||...... -.-+.+.+.+||..
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~~s~lvt~~g~gHg~~~~~-s~C~~~~v~~yl~~ 93 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLPGSRLVTVDGAGHGVYAGG-SPCVDKAVDDYLLD 93 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCCCceEEEEeccCcceecCC-ChHHHHHHHHHHHc
Confidence 4899999999999999999999999999999999999999987532 55677888888864
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity |
| >KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.39 E-value=8.9e-07 Score=67.78 Aligned_cols=101 Identities=16% Similarity=0.222 Sum_probs=64.0
Q ss_pred CcEEEeccCCCCCC-CCCcccccCCCCcEEEEecCCCCCCCCC---------CCCC------------Cc-c--chHH--
Q 020064 46 HPVVFLHGGPGGGT-TPSNRRFFDPDFYRIILFDQRGAGKSTP---------HACL------------DQ-N--TTWD-- 98 (331)
Q Consensus 46 ~~vl~~HG~~~~~~-~~~~~~~~~~~g~~vi~~D~~G~G~s~~---------~~~~------------~~-~--~~~~-- 98 (331)
|.|||-||.+++.. +......+++.||-|.++++|-+-.+-. +... +. . .-+.
T Consensus 119 PvvvFSHGLggsRt~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~irNeqv~ 198 (399)
T KOG3847|consen 119 PVVVFSHGLGGSRTLYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHIRNEQVG 198 (399)
T ss_pred cEEEEecccccchhhHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEeeCHHHH
Confidence 67999999777654 5667888889999999999987643320 0000 00 0 0011
Q ss_pred -HHHHHH---HHHHHh------------------------CCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccc
Q 020064 99 -LIDDIE---KLRQHL------------------------EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIF 147 (331)
Q Consensus 99 -~~~~~~---~~~~~~------------------------~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~ 147 (331)
-+..+. .+++.+ ...++.++|||+||..++...+.+. +++..|+++..
T Consensus 199 ~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t-~FrcaI~lD~W 274 (399)
T KOG3847|consen 199 QRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHT-DFRCAIALDAW 274 (399)
T ss_pred HHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhcccc-ceeeeeeeeee
Confidence 111111 122221 2236889999999999998877654 68888888864
|
|
| >KOG1551 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.31 E-value=3.5e-05 Score=57.80 Aligned_cols=58 Identities=16% Similarity=0.248 Sum_probs=48.5
Q ss_pred EEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCC-CcCCchhHHHHHHHHHHHhhh
Q 020064 269 ATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSA-NEPGIAAELVATNEKLKNLIK 328 (331)
Q Consensus 269 ~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~-~~~~~~~~~~~~i~~fl~~~~ 328 (331)
+.++.+++|..+|......+.+..|++++..++ +||.- +.-+ -+.+-+.|.+-|+++.
T Consensus 309 ~ivv~A~~D~Yipr~gv~~lQ~~WPg~eVr~~e-gGHVsayl~k-~dlfRR~I~d~L~R~~ 367 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPRTGVRSLQEIWPGCEVRYLE-GGHVSAYLFK-QDLFRRAIVDGLDRLD 367 (371)
T ss_pred EEEEEecCCccccccCcHHHHHhCCCCEEEEee-cCceeeeehh-chHHHHHHHHHHHhhh
Confidence 578889999999998899999999999999998 89965 3443 6778888888888764
|
|
| >KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.26 E-value=3.3e-05 Score=65.32 Aligned_cols=129 Identities=17% Similarity=0.139 Sum_probs=90.2
Q ss_pred CCccceeEeCCCceE----EEEeCC--CCCCCcEEEeccCCC-C--CCCCCcccccCCCCcEEEEecCCCCCCCCCC---
Q 020064 21 PYSTGILKVSDIHTI----YWEQSG--NPTGHPVVFLHGGPG-G--GTTPSNRRFFDPDFYRIILFDQRGAGKSTPH--- 88 (331)
Q Consensus 21 ~~~~~~~~~~~g~~l----~~~~~g--~~~~~~vl~~HG~~~-~--~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~--- 88 (331)
..+...+...||..+ .|...- ..+.|.+|..+|+-+ + ..|..-...++..|+-....|.||-|.-...
T Consensus 440 ~~~r~~~~SkDGt~VPM~Iv~kk~~k~dg~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~~WHk 519 (712)
T KOG2237|consen 440 VVERIEVSSKDGTKVPMFIVYKKDIKLDGSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGEQWHK 519 (712)
T ss_pred EEEEEEEecCCCCccceEEEEechhhhcCCCceEEEEecccceeeccccccceeEEEecceEEEEEeeccCcccccchhh
Confidence 455667788898643 343222 125677888888433 2 4444555556678998888899997654311
Q ss_pred ---CCCCccchHHHHHHHHHHHHHh--CCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccc
Q 020064 89 ---ACLDQNTTWDLIDDIEKLRQHL--EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLL 149 (331)
Q Consensus 89 ---~~~~~~~~~~~~~~~~~~~~~~--~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~ 149 (331)
......+++|+...++.+++.- ..++..+.|.|.||.++-.++..+|+.+.++|+--|...
T Consensus 520 ~G~lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~VpfmD 585 (712)
T KOG2237|consen 520 DGRLAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFMD 585 (712)
T ss_pred ccchhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCchHhhhhhhcCccee
Confidence 1113467888888888777652 346899999999999999999999999999988777654
|
|
| >COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.25 E-value=7.1e-07 Score=71.80 Aligned_cols=73 Identities=19% Similarity=0.167 Sum_probs=56.7
Q ss_pred chhhhhccccccccEEEEecCCCCccCCcchHHHHHhCCC--CcEEEecCCCCCCCcCCch--hHHHHHHHHHHHhh
Q 020064 255 SFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPE--ADFKVVADAGHSANEPGIA--AELVATNEKLKNLI 327 (331)
Q Consensus 255 ~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~~~~~--~~~~~~i~~fl~~~ 327 (331)
.+....+.++..+|+|+++|.+|..+|...+..+.+.... .+...+++++|.......+ ++..+.+.+|+.+.
T Consensus 221 ~d~~~~~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~ 297 (299)
T COG1073 221 LDPFDDAEKISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERH 297 (299)
T ss_pred CcchhhHhhcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCccHHHHHHHHHHHHHHHHh
Confidence 3445566666337999999999999999999988888755 5778889999998754323 37888899998765
|
|
| >COG4782 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=98.23 E-value=3.8e-06 Score=66.13 Aligned_cols=106 Identities=13% Similarity=0.032 Sum_probs=65.3
Q ss_pred CCCcEEEeccCCCCCC--CCCcc--cccCCCCcEEEEecCCCCCCCCCCCC---CCccchHHHHHHHHHHHHHhCCCcEE
Q 020064 44 TGHPVVFLHGGPGGGT--TPSNR--RFFDPDFYRIILFDQRGAGKSTPHAC---LDQNTTWDLIDDIEKLRQHLEIPEWQ 116 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~--~~~~~--~~~~~~g~~vi~~D~~G~G~s~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~v~ 116 (331)
.+..+||+||+..+-. .+..+ ..-.......|.+.||..|.--.... ...++-.++..-+..+.+....++|+
T Consensus 115 ~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~~I~ 194 (377)
T COG4782 115 AKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPVKRIY 194 (377)
T ss_pred CCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCCceEE
Confidence 4567999999765522 22222 22233456688899997775432211 01233333444444444444677899
Q ss_pred EEEeChhHHHHHHHHHhC--------CCceeeEEEeccccc
Q 020064 117 VFGGSWGSTLALAYSLAH--------PDKVTGLVLRGIFLL 149 (331)
Q Consensus 117 lvG~S~Gg~~a~~~a~~~--------p~~v~~li~~~~~~~ 149 (331)
|++||||.++++....+. +.+++-+|+.+|-..
T Consensus 195 ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD 235 (377)
T COG4782 195 LLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDID 235 (377)
T ss_pred EEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCC
Confidence 999999999999887652 346788888777443
|
|
| >PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases | Back alignment and domain information |
|---|
Probab=98.21 E-value=9.1e-07 Score=67.10 Aligned_cols=36 Identities=19% Similarity=0.096 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHhCC--CcEEEEEeChhHHHHHHHHH
Q 020064 97 WDLIDDIEKLRQHLEI--PEWQVFGGSWGSTLALAYSL 132 (331)
Q Consensus 97 ~~~~~~~~~~~~~~~~--~~v~lvG~S~Gg~~a~~~a~ 132 (331)
+.+++.+.+.++.... .++.+|||||||.++-.+..
T Consensus 60 ~rL~~eI~~~~~~~~~~~~~IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 60 ERLAEEILEHIKDYESKIRKISFIGHSLGGLIARYALG 97 (217)
T ss_pred HHHHHHHHHhccccccccccceEEEecccHHHHHHHHH
Confidence 3455555555554444 48999999999999876655
|
|
| >PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase | Back alignment and domain information |
|---|
Probab=98.21 E-value=0.00025 Score=57.38 Aligned_cols=59 Identities=15% Similarity=0.242 Sum_probs=46.9
Q ss_pred cccEEEEecCCCCccCCcchHHHHHhCC------------------------C-CcEEEecCCCCCCCcCCchhHHHHHH
Q 020064 266 HINATIVQGRYDVCCPMMSAWDLHKAWP------------------------E-ADFKVVADAGHSANEPGIAAELVATN 320 (331)
Q Consensus 266 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~------------------------~-~~~~~~~~~gH~~~~~~~~~~~~~~i 320 (331)
+++|||..|+.|.+|+.-..+.+.+.+. + .++..+-++||+++ .+ |+...+.+
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~q-P~~al~m~ 310 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YR-PNETFIMF 310 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cC-HHHHHHHH
Confidence 4899999999999999876666666542 1 45666779999995 45 99999999
Q ss_pred HHHHHh
Q 020064 321 EKLKNL 326 (331)
Q Consensus 321 ~~fl~~ 326 (331)
..|+..
T Consensus 311 ~~fi~~ 316 (319)
T PLN02213 311 QRWISG 316 (319)
T ss_pred HHHHcC
Confidence 999864
|
|
| >COG1770 PtrB Protease II [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.18 E-value=0.0005 Score=58.84 Aligned_cols=127 Identities=17% Similarity=0.103 Sum_probs=87.7
Q ss_pred cceeEeCCCce----EEEEeC--CCCCCCcEEEeccC-CCC--CCCCCcccccCCCCcEEEEecCCCCCCCCCC------
Q 020064 24 TGILKVSDIHT----IYWEQS--GNPTGHPVVFLHGG-PGG--GTTPSNRRFFDPDFYRIILFDQRGAGKSTPH------ 88 (331)
Q Consensus 24 ~~~~~~~~g~~----l~~~~~--g~~~~~~vl~~HG~-~~~--~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~------ 88 (331)
.-.++.+||.+ |.|+.- -+.+.|.+|..-|. +.+ ..+......++.+|+---..--||-|.-...
T Consensus 421 riwa~a~dgv~VPVSLvyrkd~~~~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~WYe~GK 500 (682)
T COG1770 421 RIWATADDGVQVPVSLVYRKDTKLDGSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRAWYEDGK 500 (682)
T ss_pred EEEEEcCCCcEeeEEEEEecccCCCCCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccChHHHHhhh
Confidence 34455578864 445532 23356777777773 222 3344555667789987666677886655421
Q ss_pred CCCCccchHHHHHHHHHHHHHh--CCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccch
Q 020064 89 ACLDQNTTWDLIDDIEKLRQHL--EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLR 150 (331)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~--~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~ 150 (331)
......++.|+.+....+++.= ..+.++++|-|.||++.-..+...|+.++++|+--|+...
T Consensus 501 ~l~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVDv 564 (682)
T COG1770 501 LLNKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVDV 564 (682)
T ss_pred hhhccccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCccch
Confidence 1113468888888888887653 2347999999999999999999999999999998887653
|
|
| >PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae | Back alignment and domain information |
|---|
Probab=98.18 E-value=4.9e-07 Score=70.79 Aligned_cols=52 Identities=21% Similarity=0.171 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHH-hCCC--cEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccc
Q 020064 98 DLIDDIEKLRQH-LEIP--EWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLL 149 (331)
Q Consensus 98 ~~~~~~~~~~~~-~~~~--~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~ 149 (331)
.+.+++...++. +... +..|+|+||||..|+.++.++|+.+.+++.+++...
T Consensus 97 ~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~ 151 (251)
T PF00756_consen 97 FLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALD 151 (251)
T ss_dssp HHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESE
T ss_pred ehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCcccc
Confidence 345566665554 3322 279999999999999999999999999999998644
|
; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D .... |
| >PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases | Back alignment and domain information |
|---|
Probab=98.07 E-value=6.4e-06 Score=72.23 Aligned_cols=121 Identities=13% Similarity=0.067 Sum_probs=69.1
Q ss_pred eCCCceEEEEeC-CCCC---CCcEEEeccCCCC---C--CCCCcccccCCCCcEEEEecCC----CCCCCCCCCCC-Ccc
Q 020064 29 VSDIHTIYWEQS-GNPT---GHPVVFLHGGPGG---G--TTPSNRRFFDPDFYRIILFDQR----GAGKSTPHACL-DQN 94 (331)
Q Consensus 29 ~~~g~~l~~~~~-g~~~---~~~vl~~HG~~~~---~--~~~~~~~~~~~~g~~vi~~D~~----G~G~s~~~~~~-~~~ 94 (331)
..|-..|..+.. +..+ -|++|+||||+-. . ..+.....+..++.-||.+++| |+-.+...... ..+
T Consensus 105 sEDCL~LnI~~P~~~~~~~~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~ 184 (535)
T PF00135_consen 105 SEDCLYLNIYTPSNASSNSKLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGNY 184 (535)
T ss_dssp ES---EEEEEEETSSSSTTSEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTSHBSTH
T ss_pred CchHHHHhhhhccccccccccceEEEeecccccCCCcccccccccccccCCCEEEEEecccccccccccccccccCchhh
Confidence 445555554433 2222 3789999996532 2 1222233344689999999999 33333222111 356
Q ss_pred chHHHHHHHHHHHHHh---C--CCcEEEEEeChhHHHHHHHHHhC--CCceeeEEEeccccc
Q 020064 95 TTWDLIDDIEKLRQHL---E--IPEWQVFGGSWGSTLALAYSLAH--PDKVTGLVLRGIFLL 149 (331)
Q Consensus 95 ~~~~~~~~~~~~~~~~---~--~~~v~lvG~S~Gg~~a~~~a~~~--p~~v~~li~~~~~~~ 149 (331)
-+.|+...++.+-+.+ | .++|.|+|||.||..+..++..- ...++++|+.++...
T Consensus 185 Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~~ 246 (535)
T PF00135_consen 185 GLLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSAL 246 (535)
T ss_dssp HHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--TT
T ss_pred hhhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeeccccccccccccccccccc
Confidence 6778877777776655 4 34899999999998887776652 357999999998543
|
Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A .... |
| >COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=98.05 E-value=2e-05 Score=62.92 Aligned_cols=82 Identities=16% Similarity=0.104 Sum_probs=57.4
Q ss_pred EEEeccCCC-CCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHh----CCCcEEEEEeCh
Q 020064 48 VVFLHGGPG-GGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHL----EIPEWQVFGGSW 122 (331)
Q Consensus 48 vl~~HG~~~-~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~v~lvG~S~ 122 (331)
-||+.|-++ ..........+.++|+.||.+|-.=|=.|.+ +.++.++|+..+++.+ +..++.|+|+|+
T Consensus 263 av~~SGDGGWr~lDk~v~~~l~~~gvpVvGvdsLRYfW~~r-------tPe~~a~Dl~r~i~~y~~~w~~~~~~liGySf 335 (456)
T COG3946 263 AVFYSGDGGWRDLDKEVAEALQKQGVPVVGVDSLRYFWSER-------TPEQIAADLSRLIRFYARRWGAKRVLLIGYSF 335 (456)
T ss_pred EEEEecCCchhhhhHHHHHHHHHCCCceeeeehhhhhhccC-------CHHHHHHHHHHHHHHHHHhhCcceEEEEeecc
Confidence 466666322 2333556777888999999999655544543 4567777777777654 667999999999
Q ss_pred hHHHHHHHHHhCCC
Q 020064 123 GSTLALAYSLAHPD 136 (331)
Q Consensus 123 Gg~~a~~~a~~~p~ 136 (331)
|+-+.-....+.|.
T Consensus 336 GADvlP~~~n~L~~ 349 (456)
T COG3946 336 GADVLPFAYNRLPP 349 (456)
T ss_pred cchhhHHHHHhCCH
Confidence 99887766666553
|
|
| >KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=97.94 E-value=1.4e-05 Score=69.01 Aligned_cols=122 Identities=16% Similarity=0.174 Sum_probs=68.0
Q ss_pred CccceeEeCCCceEEEEeCC---------CCCCCcEEEeccCCCCCC-CCC----------------cccccCCCCcEEE
Q 020064 22 YSTGILKVSDIHTIYWEQSG---------NPTGHPVVFLHGGPGGGT-TPS----------------NRRFFDPDFYRII 75 (331)
Q Consensus 22 ~~~~~~~~~~g~~l~~~~~g---------~~~~~~vl~~HG~~~~~~-~~~----------------~~~~~~~~g~~vi 75 (331)
..++..+..+.+.++....| +.++-||+|++|..|+.. ... .........|+.+
T Consensus 57 i~~r~t~~a~kY~LYLY~Egs~~~e~~~lelsGIPVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFF 136 (973)
T KOG3724|consen 57 IPERLTPQADKYSLYLYREGSRWWERSTLELSGIPVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFF 136 (973)
T ss_pred CcccccCCCCceEEEEecccccccccccccCCCceEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceE
Confidence 33444455565566544333 235668999999766532 111 1112223567788
Q ss_pred EecCCCCCCCCCCCCCCccchHHHHHHHHHHHH----HhCC---------CcEEEEEeChhHHHHHHHHHhC---CCcee
Q 020064 76 LFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQ----HLEI---------PEWQVFGGSWGSTLALAYSLAH---PDKVT 139 (331)
Q Consensus 76 ~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~----~~~~---------~~v~lvG~S~Gg~~a~~~a~~~---p~~v~ 139 (331)
+.|+-+ .-....+.+..+.++-+.+.++ .... ..|+++||||||.+|..++..- ++.|.
T Consensus 137 aVDFnE-----e~tAm~G~~l~dQtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVn 211 (973)
T KOG3724|consen 137 AVDFNE-----EFTAMHGHILLDQTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVN 211 (973)
T ss_pred EEcccc-----hhhhhccHhHHHHHHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhh
Confidence 888754 1111123345555544444333 2221 2499999999999998776532 45566
Q ss_pred eEEEecccc
Q 020064 140 GLVLRGIFL 148 (331)
Q Consensus 140 ~li~~~~~~ 148 (331)
-++..+++.
T Consensus 212 tIITlssPH 220 (973)
T KOG3724|consen 212 TIITLSSPH 220 (973)
T ss_pred hhhhhcCcc
Confidence 666666543
|
|
| >COG2272 PnbA Carboxylesterase type B [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=97.91 E-value=0.00017 Score=59.63 Aligned_cols=120 Identities=14% Similarity=0.067 Sum_probs=71.7
Q ss_pred CCCceEEEEeCC--CCCCCcEEEeccCC---CCCC-CCCcccccCCCC-cEEEEecCCC--CCCCC----C--CCCCCcc
Q 020064 30 SDIHTIYWEQSG--NPTGHPVVFLHGGP---GGGT-TPSNRRFFDPDF-YRIILFDQRG--AGKST----P--HACLDQN 94 (331)
Q Consensus 30 ~~g~~l~~~~~g--~~~~~~vl~~HG~~---~~~~-~~~~~~~~~~~g-~~vi~~D~~G--~G~s~----~--~~~~~~~ 94 (331)
.|...|..+.-. ..+.|++|+||||+ ++.. ...--..|+++| +-|+.+++|= .|.-. . .......
T Consensus 77 EDCL~LNIwaP~~~a~~~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~ 156 (491)
T COG2272 77 EDCLYLNIWAPEVPAEKLPVMVYIHGGGYIMGSGSEPLYDGSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNL 156 (491)
T ss_pred ccceeEEeeccCCCCCCCcEEEEEeccccccCCCcccccChHHHHhcCCEEEEEeCcccccceeeehhhccccccccccc
Confidence 344445444332 22348899999954 2222 233444455666 9999999982 22111 1 1111123
Q ss_pred chHHHHHHHHHH---HHHhCC--CcEEEEEeChhHHHHHHHHHh--CCCceeeEEEeccccc
Q 020064 95 TTWDLIDDIEKL---RQHLEI--PEWQVFGGSWGSTLALAYSLA--HPDKVTGLVLRGIFLL 149 (331)
Q Consensus 95 ~~~~~~~~~~~~---~~~~~~--~~v~lvG~S~Gg~~a~~~a~~--~p~~v~~li~~~~~~~ 149 (331)
-+.|++..++.+ ++++|. ++|.|+|+|.|++.++.+.+. ....+.++|+.++...
T Consensus 157 Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 157 GLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGAAS 218 (491)
T ss_pred cHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCCCC
Confidence 556666666555 455554 479999999999988877654 1236788888887664
|
|
| >PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.91 E-value=8.9e-05 Score=62.99 Aligned_cols=81 Identities=25% Similarity=0.322 Sum_probs=59.0
Q ss_pred CCcEEEEecCCCCCCCCCCCC-----CCccchHHHHHHHHHHHHHhC-------CCcEEEEEeChhHHHHHHHHHhCCCc
Q 020064 70 DFYRIILFDQRGAGKSTPHAC-----LDQNTTWDLIDDIEKLRQHLE-------IPEWQVFGGSWGSTLALAYSLAHPDK 137 (331)
Q Consensus 70 ~g~~vi~~D~~G~G~s~~~~~-----~~~~~~~~~~~~~~~~~~~~~-------~~~v~lvG~S~Gg~~a~~~a~~~p~~ 137 (331)
-|-.+|++++|-+|.|.+... ....+.++..+|+..+++.+. ..|++++|-|+||.+|..+-.++|+.
T Consensus 58 ~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~ 137 (434)
T PF05577_consen 58 FGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPHL 137 (434)
T ss_dssp HTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TTT
T ss_pred cCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCCe
Confidence 577899999999999986432 233677888899988887653 23899999999999999999999999
Q ss_pred eeeEEEeccccch
Q 020064 138 VTGLVLRGIFLLR 150 (331)
Q Consensus 138 v~~li~~~~~~~~ 150 (331)
|.|.+.-+++...
T Consensus 138 ~~ga~ASSapv~a 150 (434)
T PF05577_consen 138 FDGAWASSAPVQA 150 (434)
T ss_dssp -SEEEEET--CCH
T ss_pred eEEEEeccceeee
Confidence 9999998887754
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C. |
| >KOG3101 consensus Esterase D [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.91 E-value=9.2e-05 Score=53.71 Aligned_cols=105 Identities=14% Similarity=0.105 Sum_probs=64.6
Q ss_pred CCcEEEeccCCCCCCC----CCcccccCCCCcEEEEecCCCCCCCCCCCC--C------------------Cccch-HHH
Q 020064 45 GHPVVFLHGGPGGGTT----PSNRRFFDPDFYRIILFDQRGAGKSTPHAC--L------------------DQNTT-WDL 99 (331)
Q Consensus 45 ~~~vl~~HG~~~~~~~----~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~--~------------------~~~~~-~~~ 99 (331)
-|++.++.|....... ..+.....+.|+.|++||-.-.|..-.... . ..+.+ +-+
T Consensus 44 ~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvnAt~epw~~~yrMYdYv 123 (283)
T KOG3101|consen 44 CPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVNATQEPWAKHYRMYDYV 123 (283)
T ss_pred CceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeEEecccchHhhhhhHHHHH
Confidence 3678888887654322 123333445899999999654332211100 0 00112 223
Q ss_pred HHHHHHHHHH----hCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccc
Q 020064 100 IDDIEKLRQH----LEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLL 149 (331)
Q Consensus 100 ~~~~~~~~~~----~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~ 149 (331)
.+.+-++++. ++..++.|.||||||.=|+..+.+.|++.+.+-..+|...
T Consensus 124 ~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~N 177 (283)
T KOG3101|consen 124 VKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICN 177 (283)
T ss_pred HHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccC
Confidence 3444444442 2345799999999999999999999999988888777543
|
|
| >COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.91 E-value=0.00015 Score=56.11 Aligned_cols=115 Identities=12% Similarity=0.100 Sum_probs=66.2
Q ss_pred CCceEEEEeCCCC---CCCcEEEecc--CCCCCCCCCcccccCC----CCcEEEEecCCCCCCCCCCCCCCccchHH---
Q 020064 31 DIHTIYWEQSGNP---TGHPVVFLHG--GPGGGTTPSNRRFFDP----DFYRIILFDQRGAGKSTPHACLDQNTTWD--- 98 (331)
Q Consensus 31 ~g~~l~~~~~g~~---~~~~vl~~HG--~~~~~~~~~~~~~~~~----~g~~vi~~D~~G~G~s~~~~~~~~~~~~~--- 98 (331)
+-..+.|...|-. +-|++++.|| +..+.........+.. ..-.+|.+|.----. +.. ..+..++
T Consensus 81 ~~~~vv~lppgy~~~~k~pvl~~~DG~~~~~~g~i~~~~dsli~~g~i~pai~vgid~~d~~~--R~~--~~~~n~~~~~ 156 (299)
T COG2382 81 ERRRVVYLPPGYNPLEKYPVLYLQDGQDWFRSGRIPRILDSLIAAGEIPPAILVGIDYIDVKK--RRE--ELHCNEAYWR 156 (299)
T ss_pred ceeEEEEeCCCCCccccccEEEEeccHHHHhcCChHHHHHHHHHcCCCCCceEEecCCCCHHH--HHH--HhcccHHHHH
Confidence 3334555555521 2367899999 4445555554444444 334566666532000 000 0112223
Q ss_pred -HHHHHHHHHHHh-----CCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccc
Q 020064 99 -LIDDIEKLRQHL-----EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLL 149 (331)
Q Consensus 99 -~~~~~~~~~~~~-----~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~ 149 (331)
+++.+.=.++.. ....-+|.|.|+||.+++..+.++|+.+..++..++...
T Consensus 157 ~L~~eLlP~v~~~yp~~~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~ 213 (299)
T COG2382 157 FLAQELLPYVEERYPTSADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFW 213 (299)
T ss_pred HHHHHhhhhhhccCcccccCCCcEEeccccccHHHHHHHhcCchhhceeeccCCccc
Confidence 333333333321 123578999999999999999999999999998887553
|
|
| >KOG3967 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.86 E-value=0.00011 Score=53.30 Aligned_cols=103 Identities=16% Similarity=0.124 Sum_probs=61.6
Q ss_pred CCcEEEeccCCCC--CCCC---------------CcccccCCCCcEEEEecCCC---CCCCCCCCCCCccchHHHHH-HH
Q 020064 45 GHPVVFLHGGPGG--GTTP---------------SNRRFFDPDFYRIILFDQRG---AGKSTPHACLDQNTTWDLID-DI 103 (331)
Q Consensus 45 ~~~vl~~HG~~~~--~~~~---------------~~~~~~~~~g~~vi~~D~~G---~G~s~~~~~~~~~~~~~~~~-~~ 103 (331)
...+|+|||.+-. +.|. ..+....+.||.|++.+.-- +-.+...+.....+..+.+. .+
T Consensus 101 ~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~yvw 180 (297)
T KOG3967|consen 101 QKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAKYVW 180 (297)
T ss_pred cceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchhccchHHHHHHHH
Confidence 4479999995421 2221 12222335899999987531 11221111101112222222 33
Q ss_pred HHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCC--ceeeEEEeccc
Q 020064 104 EKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPD--KVTGLVLRGIF 147 (331)
Q Consensus 104 ~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~--~v~~li~~~~~ 147 (331)
..++.-...+.+.++.||.||...+.+..++|+ +|.++.+.+++
T Consensus 181 ~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~ 226 (297)
T KOG3967|consen 181 KNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSA 226 (297)
T ss_pred HHHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeeccc
Confidence 445555566789999999999999999999975 67777777765
|
|
| >PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children | Back alignment and domain information |
|---|
Probab=97.84 E-value=2.6e-05 Score=60.12 Aligned_cols=105 Identities=16% Similarity=0.096 Sum_probs=51.1
Q ss_pred CCCCcEEEeccCCCCCC---CCCcccccC---CCCcEEEEecCCCCCCC-CCCCCCCccchHHHHHHHHHHHHHhC-C-C
Q 020064 43 PTGHPVVFLHGGPGGGT---TPSNRRFFD---PDFYRIILFDQRGAGKS-TPHACLDQNTTWDLIDDIEKLRQHLE-I-P 113 (331)
Q Consensus 43 ~~~~~vl~~HG~~~~~~---~~~~~~~~~---~~g~~vi~~D~~G~G~s-~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~ 113 (331)
++..|||+.||.+++.. ....+..+. -.|.-|..++.- -+.+ +.... .-....+.++.+.+.+.... . +
T Consensus 3 ~~~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~ig-~~~~~D~~~s-~f~~v~~Qv~~vc~~l~~~p~L~~ 80 (279)
T PF02089_consen 3 PSPLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEIG-NDPSEDVENS-FFGNVNDQVEQVCEQLANDPELAN 80 (279)
T ss_dssp TSS--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--SS-SSHHHHHHHH-HHSHHHHHHHHHHHHHHH-GGGTT
T ss_pred CCCCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEEC-CCcchhhhhh-HHHHHHHHHHHHHHHHhhChhhhc
Confidence 34558999999765432 122222221 257778887763 2211 10000 01233444444544444321 1 3
Q ss_pred cEEEEEeChhHHHHHHHHHhCCC-ceeeEEEeccccc
Q 020064 114 EWQVFGGSWGSTLALAYSLAHPD-KVTGLVLRGIFLL 149 (331)
Q Consensus 114 ~v~lvG~S~Gg~~a~~~a~~~p~-~v~~li~~~~~~~ 149 (331)
-++++|+|.||.++-.++.+.|+ .|+.+|.++++-.
T Consensus 81 G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph~ 117 (279)
T PF02089_consen 81 GFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPHM 117 (279)
T ss_dssp -EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--TT
T ss_pred ceeeeeeccccHHHHHHHHHCCCCCceeEEEecCccc
Confidence 59999999999999999999865 6999999987654
|
Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A. |
| >PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2 | Back alignment and domain information |
|---|
Probab=97.84 E-value=3.6e-05 Score=63.89 Aligned_cols=114 Identities=11% Similarity=0.001 Sum_probs=66.1
Q ss_pred eeEeCCCceEEEEeCCCCCCCcEEEec-c-CCCCCCCCCcccccCCCCcE------EEEecCCCCCCCCCCCCCCccchH
Q 020064 26 ILKVSDIHTIYWEQSGNPTGHPVVFLH-G-GPGGGTTPSNRRFFDPDFYR------IILFDQRGAGKSTPHACLDQNTTW 97 (331)
Q Consensus 26 ~~~~~~g~~l~~~~~g~~~~~~vl~~H-G-~~~~~~~~~~~~~~~~~g~~------vi~~D~~G~G~s~~~~~~~~~~~~ 97 (331)
.....+|..+.....|. -..|-.+- . ..+...|..++..|.+.||. ..-+|+|---. ..+
T Consensus 33 ~~~~~~gv~i~~~~~g~--~~~i~~ld~~~~~~~~~~~~li~~L~~~GY~~~~~l~~~pYDWR~~~~----------~~~ 100 (389)
T PF02450_consen 33 HYSNDPGVEIRVPGFGG--TSGIEYLDPSFITGYWYFAKLIENLEKLGYDRGKDLFAAPYDWRLSPA----------ERD 100 (389)
T ss_pred ceecCCCceeecCCCCc--eeeeeecccccccccchHHHHHHHHHhcCcccCCEEEEEeechhhchh----------hHH
Confidence 44455666666655552 11222221 1 11112344566666665554 22368773111 233
Q ss_pred HHHHHHHHHHHHh---CCCcEEEEEeChhHHHHHHHHHhCCC------ceeeEEEeccccchh
Q 020064 98 DLIDDIEKLRQHL---EIPEWQVFGGSWGSTLALAYSLAHPD------KVTGLVLRGIFLLRK 151 (331)
Q Consensus 98 ~~~~~~~~~~~~~---~~~~v~lvG~S~Gg~~a~~~a~~~p~------~v~~li~~~~~~~~~ 151 (331)
++...+...++.. ..+||+|+||||||.++..+....+. .|+++|.++++....
T Consensus 101 ~~~~~lk~~ie~~~~~~~~kv~li~HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p~~Gs 163 (389)
T PF02450_consen 101 EYFTKLKQLIEEAYKKNGKKVVLIAHSMGGLVARYFLQWMPQEEWKDKYIKRFISIGTPFGGS 163 (389)
T ss_pred HHHHHHHHHHHHHHHhcCCcEEEEEeCCCchHHHHHHHhccchhhHHhhhhEEEEeCCCCCCC
Confidence 4444444444433 25799999999999999999888743 599999999877643
|
3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process |
| >COG0627 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.00013 Score=58.11 Aligned_cols=57 Identities=21% Similarity=0.183 Sum_probs=42.2
Q ss_pred cchHH-HHHHHHHHHHH-hCC----CcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccch
Q 020064 94 NTTWD-LIDDIEKLRQH-LEI----PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLR 150 (331)
Q Consensus 94 ~~~~~-~~~~~~~~~~~-~~~----~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~ 150 (331)
+.+++ +.+.+-..+++ ... ++..++||||||.-|+.+|+++|++++.+...++....
T Consensus 127 ~q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~ 189 (316)
T COG0627 127 YQWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSP 189 (316)
T ss_pred cchhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceeccccccccc
Confidence 44444 34455544443 331 26899999999999999999999999999999887654
|
|
| >PLN02606 palmitoyl-protein thioesterase | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00012 Score=57.01 Aligned_cols=100 Identities=17% Similarity=0.101 Sum_probs=58.7
Q ss_pred CCCcEEEeccCCCC---CCCCCcccccC-CCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHH---hCCCcEE
Q 020064 44 TGHPVVFLHGGPGG---GTTPSNRRFFD-PDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQH---LEIPEWQ 116 (331)
Q Consensus 44 ~~~~vl~~HG~~~~---~~~~~~~~~~~-~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~ 116 (331)
+..|||+.||.+++ .....+...+. ..++.+..+. .|-+.. .. .-....+.++.+.+-+.. +. +-++
T Consensus 25 ~~~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~~~~---~s-~~~~~~~Qv~~vce~l~~~~~L~-~G~n 98 (306)
T PLN02606 25 LSVPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGNGVQ---DS-LFMPLRQQASIACEKIKQMKELS-EGYN 98 (306)
T ss_pred CCCCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECCCcc---cc-cccCHHHHHHHHHHHHhcchhhc-CceE
Confidence 45689999996643 22223333332 1355444444 222211 10 112334444444333332 22 3499
Q ss_pred EEEeChhHHHHHHHHHhCCC--ceeeEEEeccccc
Q 020064 117 VFGGSWGSTLALAYSLAHPD--KVTGLVLRGIFLL 149 (331)
Q Consensus 117 lvG~S~Gg~~a~~~a~~~p~--~v~~li~~~~~~~ 149 (331)
++|+|.||.++-.++.+.|+ .|+.+|.++++-.
T Consensus 99 aIGfSQGglflRa~ierc~~~p~V~nlISlggph~ 133 (306)
T PLN02606 99 IVAESQGNLVARGLIEFCDNAPPVINYVSLGGPHA 133 (306)
T ss_pred EEEEcchhHHHHHHHHHCCCCCCcceEEEecCCcC
Confidence 99999999999999999977 5999999998654
|
|
| >cd00741 Lipase Lipase | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00016 Score=51.71 Aligned_cols=52 Identities=19% Similarity=0.085 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHH----hCCCcEEEEEeChhHHHHHHHHHhCCC----ceeeEEEeccccc
Q 020064 98 DLIDDIEKLRQH----LEIPEWQVFGGSWGSTLALAYSLAHPD----KVTGLVLRGIFLL 149 (331)
Q Consensus 98 ~~~~~~~~~~~~----~~~~~v~lvG~S~Gg~~a~~~a~~~p~----~v~~li~~~~~~~ 149 (331)
.+...+...++. ....+++++|||+||.+|..++..... ....++..+++..
T Consensus 9 ~~~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~ 68 (153)
T cd00741 9 SLANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRV 68 (153)
T ss_pred HHHHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCcc
Confidence 344444444433 356789999999999999999887754 5677777777654
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00019 Score=59.26 Aligned_cols=110 Identities=20% Similarity=0.348 Sum_probs=81.2
Q ss_pred CCCCCcEEEecc-CCCCCCCC-----CcccccCCCCcEEEEecCCCCCCCCCCCCC-----CccchHHHHHHHHHHHHHh
Q 020064 42 NPTGHPVVFLHG-GPGGGTTP-----SNRRFFDPDFYRIILFDQRGAGKSTPHACL-----DQNTTWDLIDDIEKLRQHL 110 (331)
Q Consensus 42 ~~~~~~vl~~HG-~~~~~~~~-----~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~-----~~~~~~~~~~~~~~~~~~~ 110 (331)
.+++|..|+|-| ++.+..|- .+.....+.|-.|+..++|-+|.|.+.... ...+..+..+|+..+++.+
T Consensus 83 ~~~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~ 162 (514)
T KOG2182|consen 83 KPGGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAM 162 (514)
T ss_pred cCCCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHH
Confidence 346777777777 55554442 122223347889999999999988654322 2246677888998888876
Q ss_pred CC-------CcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchh
Q 020064 111 EI-------PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRK 151 (331)
Q Consensus 111 ~~-------~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~ 151 (331)
.. .|.+.+|-|+-|.++..+=..+|+.+.|.|.-+++....
T Consensus 163 n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv~A~ 210 (514)
T KOG2182|consen 163 NAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPVLAK 210 (514)
T ss_pred HhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeecccccceeEE
Confidence 32 289999999999999999999999999999988877643
|
|
| >PLN02633 palmitoyl protein thioesterase family protein | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00064 Score=53.20 Aligned_cols=100 Identities=11% Similarity=0.012 Sum_probs=60.8
Q ss_pred CCCcEEEeccCCCCCCC---CCcccccC-CCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHH---hCCCcEE
Q 020064 44 TGHPVVFLHGGPGGGTT---PSNRRFFD-PDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQH---LEIPEWQ 116 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~~---~~~~~~~~-~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~ 116 (331)
...|+|+.||.+++... ..+...+. -.|..+..+.. |.+.... .-....+.++.+.+-+.. +. +-++
T Consensus 24 ~~~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i---g~~~~~s--~~~~~~~Qve~vce~l~~~~~l~-~G~n 97 (314)
T PLN02633 24 VSVPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI---GNGVGDS--WLMPLTQQAEIACEKVKQMKELS-QGYN 97 (314)
T ss_pred CCCCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE---CCCcccc--ceeCHHHHHHHHHHHHhhchhhh-CcEE
Confidence 45689999997665332 22222221 14566665543 3321111 123344455544443333 22 3499
Q ss_pred EEEeChhHHHHHHHHHhCCC--ceeeEEEeccccc
Q 020064 117 VFGGSWGSTLALAYSLAHPD--KVTGLVLRGIFLL 149 (331)
Q Consensus 117 lvG~S~Gg~~a~~~a~~~p~--~v~~li~~~~~~~ 149 (331)
++|+|.||.++-.++.+.|+ .|+.+|.++++-.
T Consensus 98 aIGfSQGGlflRa~ierc~~~p~V~nlISlggph~ 132 (314)
T PLN02633 98 IVGRSQGNLVARGLIEFCDGGPPVYNYISLAGPHA 132 (314)
T ss_pred EEEEccchHHHHHHHHHCCCCCCcceEEEecCCCC
Confidence 99999999999999999987 5999999987654
|
|
| >KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.0009 Score=50.74 Aligned_cols=99 Identities=16% Similarity=0.204 Sum_probs=61.6
Q ss_pred CCCcEEEeccCCCCCCC---CCcccccC-CCCcEEEEecCCCCC--CCCCCCCCCccchHHHHHHHHHHHHHhC--CCcE
Q 020064 44 TGHPVVFLHGGPGGGTT---PSNRRFFD-PDFYRIILFDQRGAG--KSTPHACLDQNTTWDLIDDIEKLRQHLE--IPEW 115 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~~---~~~~~~~~-~~g~~vi~~D~~G~G--~s~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v 115 (331)
+..|+|++||.+++... ..+...+. -.|..|++.|. |-| .|. -....++++.+.+.+.... .+-+
T Consensus 22 s~~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei-g~g~~~s~------l~pl~~Qv~~~ce~v~~m~~lsqGy 94 (296)
T KOG2541|consen 22 SPVPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI-GDGIKDSS------LMPLWEQVDVACEKVKQMPELSQGY 94 (296)
T ss_pred ccCCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe-cCCcchhh------hccHHHHHHHHHHHHhcchhccCce
Confidence 33679999996655333 22222221 26788888885 444 221 1234455554444443222 1348
Q ss_pred EEEEeChhHHHHHHHHHhCCC-ceeeEEEeccccc
Q 020064 116 QVFGGSWGSTLALAYSLAHPD-KVTGLVLRGIFLL 149 (331)
Q Consensus 116 ~lvG~S~Gg~~a~~~a~~~p~-~v~~li~~~~~~~ 149 (331)
.++|.|.||.++-.++...++ .++.+|.++++-.
T Consensus 95 nivg~SQGglv~Raliq~cd~ppV~n~ISL~gPha 129 (296)
T KOG2541|consen 95 NIVGYSQGGLVARALIQFCDNPPVKNFISLGGPHA 129 (296)
T ss_pred EEEEEccccHHHHHHHHhCCCCCcceeEeccCCcC
Confidence 999999999999999887654 5888998887544
|
|
| >PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.001 Score=54.12 Aligned_cols=36 Identities=22% Similarity=0.209 Sum_probs=32.2
Q ss_pred cEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccc
Q 020064 114 EWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLL 149 (331)
Q Consensus 114 ~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~ 149 (331)
|++++|+|.||.+|..+|.-.|..+++++=-++.+.
T Consensus 185 p~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~~ 220 (403)
T PF11144_consen 185 PKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYAL 220 (403)
T ss_pred cEEEEecCcHHHHHHHHHhhCccceeEEEecCcccc
Confidence 899999999999999999999999999887776554
|
|
| >PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides [] | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.00038 Score=49.00 Aligned_cols=38 Identities=18% Similarity=0.164 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhC
Q 020064 97 WDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAH 134 (331)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~ 134 (331)
+.+.+.+..+++.....++++.|||+||.+|..++...
T Consensus 48 ~~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l 85 (140)
T PF01764_consen 48 DQILDALKELVEKYPDYSIVITGHSLGGALASLAAADL 85 (140)
T ss_dssp HHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccCccchhhccchHHHHHHHHHHhh
Confidence 35566667767776767899999999999999988763
|
Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A .... |
| >COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.007 Score=46.68 Aligned_cols=101 Identities=16% Similarity=0.095 Sum_probs=67.1
Q ss_pred CcEEEeccCCCC-CC-CCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCcEEEEEeChh
Q 020064 46 HPVVFLHGGPGG-GT-TPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWG 123 (331)
Q Consensus 46 ~~vl~~HG~~~~-~~-~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG~S~G 123 (331)
|.|+++-...+. .. ....+..++. ...|+..|+-.--.-+... ...+++++.+.+.+++..+|.+ +++++.|.-
T Consensus 104 PkvLivapmsGH~aTLLR~TV~alLp-~~~vyitDW~dAr~Vp~~~--G~FdldDYIdyvie~~~~~Gp~-~hv~aVCQP 179 (415)
T COG4553 104 PKVLIVAPMSGHYATLLRGTVEALLP-YHDVYITDWVDARMVPLEA--GHFDLDDYIDYVIEMINFLGPD-AHVMAVCQP 179 (415)
T ss_pred CeEEEEecccccHHHHHHHHHHHhcc-ccceeEeeccccceeeccc--CCccHHHHHHHHHHHHHHhCCC-CcEEEEecC
Confidence 456666554443 22 2344455543 4578888886543333222 4678999999999999999955 788888876
Q ss_pred HH-----HHHHHHHhCCCceeeEEEeccccch
Q 020064 124 ST-----LALAYSLAHPDKVTGLVLRGIFLLR 150 (331)
Q Consensus 124 g~-----~a~~~a~~~p~~v~~li~~~~~~~~ 150 (331)
+. +++..+...|......++++++...
T Consensus 180 ~vPvLAAisLM~~~~~p~~PssMtlmGgPIDa 211 (415)
T COG4553 180 TVPVLAAISLMEEDGDPNVPSSMTLMGGPIDA 211 (415)
T ss_pred CchHHHHHHHHHhcCCCCCCceeeeecCcccc
Confidence 54 3444444567788999999987764
|
|
| >KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.00041 Score=55.87 Aligned_cols=101 Identities=24% Similarity=0.270 Sum_probs=72.1
Q ss_pred CcEEEeccCCCCCCC--------CCcccccCCCCcEEEEecCCCCCCCCCCCCC--------CccchHHHHHHHHHHHHH
Q 020064 46 HPVVFLHGGPGGGTT--------PSNRRFFDPDFYRIILFDQRGAGKSTPHACL--------DQNTTWDLIDDIEKLRQH 109 (331)
Q Consensus 46 ~~vl~~HG~~~~~~~--------~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~--------~~~~~~~~~~~~~~~~~~ 109 (331)
-||+|.-|..++-.+ |..++. .+--+|-.++|-+|+|.+-... ...+.++-.+|...++..
T Consensus 81 gPIffYtGNEGdie~Fa~ntGFm~D~Ap~---~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~ 157 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIEWFANNTGFMWDLAPE---LKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTF 157 (492)
T ss_pred CceEEEeCCcccHHHHHhccchHHhhhHh---hCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHH
Confidence 568888886654322 344443 4567899999999999754321 123556666777777766
Q ss_pred hC------CCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccc
Q 020064 110 LE------IPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLL 149 (331)
Q Consensus 110 ~~------~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~ 149 (331)
+. ..+|+.+|-|+||+++..+=.++|..+.|....+.+..
T Consensus 158 lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAPvl 203 (492)
T KOG2183|consen 158 LKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAPVL 203 (492)
T ss_pred HhhccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCceE
Confidence 63 23899999999999999999999998888877766543
|
|
| >PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.00031 Score=41.02 Aligned_cols=42 Identities=14% Similarity=0.086 Sum_probs=22.6
Q ss_pred CCCCccceeEeCCCceEEEEeCCC--------CCCCcEEEeccCCCCCCC
Q 020064 19 VEPYSTGILKVSDIHTIYWEQSGN--------PTGHPVVFLHGGPGGGTT 60 (331)
Q Consensus 19 ~~~~~~~~~~~~~g~~l~~~~~g~--------~~~~~vl~~HG~~~~~~~ 60 (331)
..+.+++.+++.||.-|....... +.+|+|++.||..+++..
T Consensus 9 GY~~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~ 58 (63)
T PF04083_consen 9 GYPCEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDD 58 (63)
T ss_dssp T---EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGG
T ss_pred CCCcEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHH
Confidence 456789999999998777654432 246789999996665443
|
The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B. |
| >COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.00074 Score=51.57 Aligned_cols=50 Identities=20% Similarity=0.189 Sum_probs=40.0
Q ss_pred HHHHHHHHHHH---hCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEecccc
Q 020064 99 LIDDIEKLRQH---LEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFL 148 (331)
Q Consensus 99 ~~~~~~~~~~~---~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~ 148 (331)
+.+.+.-+++. .+.++..++|||+||.+++.+...+|+.+...++++|..
T Consensus 120 L~~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSl 172 (264)
T COG2819 120 LTEQLKPFIEARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSL 172 (264)
T ss_pred HHHhhHHHHhcccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecchh
Confidence 34445555554 244578999999999999999999999999999999854
|
|
| >PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.0016 Score=49.48 Aligned_cols=50 Identities=16% Similarity=0.092 Sum_probs=37.4
Q ss_pred HHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhC----CCceeeEEEeccccch
Q 020064 100 IDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAH----PDKVTGLVLRGIFLLR 150 (331)
Q Consensus 100 ~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~----p~~v~~li~~~~~~~~ 150 (331)
++-+..+++..+ +++.+.|||.||.+|..++... .++|.+++..+++...
T Consensus 72 ~~yl~~~~~~~~-~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPGf~ 125 (224)
T PF11187_consen 72 LAYLKKIAKKYP-GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPGFS 125 (224)
T ss_pred HHHHHHHHHhCC-CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCCCC
Confidence 334444555555 3599999999999999999884 3578999988887654
|
|
| >COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0027 Score=50.49 Aligned_cols=62 Identities=16% Similarity=0.064 Sum_probs=48.5
Q ss_pred cccccccEEEEecCCCCccCCcchHHHHHhCCCC-cEEEecCCCCCCCcCCchhHHHHHHHHHHHhhh
Q 020064 262 DNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEA-DFKVVADAGHSANEPGIAAELVATNEKLKNLIK 328 (331)
Q Consensus 262 ~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~ 328 (331)
.++ ..|-.++.|..|.+.+++.+....+.+|+. .+..+|+..|... .+.+.+.|..|+++..
T Consensus 326 ~RL-alpKyivnaSgDdff~pDsa~lYyd~LPG~kaLrmvPN~~H~~~----n~~i~esl~~flnrfq 388 (507)
T COG4287 326 LRL-ALPKYIVNASGDDFFVPDSANLYYDDLPGEKALRMVPNDPHNLI----NQFIKESLEPFLNRFQ 388 (507)
T ss_pred hhc-cccceeecccCCcccCCCccceeeccCCCceeeeeCCCCcchhh----HHHHHHHHHHHHHHHh
Confidence 345 599999999999999999999999999875 5778899999874 4445566666666654
|
|
| >KOG1516 consensus Carboxylesterase and related proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0048 Score=54.37 Aligned_cols=106 Identities=14% Similarity=0.098 Sum_probs=64.7
Q ss_pred CCcEEEeccCCC---CCC---CCCcccccCCCCcEEEEecCC----CCCCCCCCCCCCccchHHHHHHHHHHHHHh---C
Q 020064 45 GHPVVFLHGGPG---GGT---TPSNRRFFDPDFYRIILFDQR----GAGKSTPHACLDQNTTWDLIDDIEKLRQHL---E 111 (331)
Q Consensus 45 ~~~vl~~HG~~~---~~~---~~~~~~~~~~~g~~vi~~D~~----G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~---~ 111 (331)
-|++|++|||+- +.. .......+..+..-|+.+.+| |+...........+-+.|+...+..+-+.+ |
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~gN~gl~Dq~~AL~wv~~~I~~FG 191 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPGNLGLFDQLLALRWVKDNIPSFG 191 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCCCCcccHHHHHHHHHHHHHHHHhcC
Confidence 588999999642 221 223333344457788888887 332222111123456667776666655444 4
Q ss_pred --CCcEEEEEeChhHHHHHHHHHhC--CCceeeEEEeccccch
Q 020064 112 --IPEWQVFGGSWGSTLALAYSLAH--PDKVTGLVLRGIFLLR 150 (331)
Q Consensus 112 --~~~v~lvG~S~Gg~~a~~~a~~~--p~~v~~li~~~~~~~~ 150 (331)
.++|.++|||.||..+..+...- ...+.++|..++....
T Consensus 192 Gdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~~~ 234 (545)
T KOG1516|consen 192 GDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNALS 234 (545)
T ss_pred CCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhcccccc
Confidence 45899999999999987776532 2456677777665443
|
|
| >PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0011 Score=50.07 Aligned_cols=94 Identities=16% Similarity=0.048 Sum_probs=56.2
Q ss_pred EEEecc-CCCC-C--CCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHH----HHHHHHHHHhCC----CcE
Q 020064 48 VVFLHG-GPGG-G--TTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLI----DDIEKLRQHLEI----PEW 115 (331)
Q Consensus 48 vl~~HG-~~~~-~--~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~----~~~~~~~~~~~~----~~v 115 (331)
|=|+-| +.++ . .|..+.+.+.++||.||+.-+.- |.. +..-..+.. ..+..+.+..+. -++
T Consensus 20 ihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~-tfD------H~~~A~~~~~~f~~~~~~L~~~~~~~~~~lP~ 92 (250)
T PF07082_consen 20 IHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVV-TFD------HQAIAREVWERFERCLRALQKRGGLDPAYLPV 92 (250)
T ss_pred EEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCC-CCc------HHHHHHHHHHHHHHHHHHHHHhcCCCcccCCe
Confidence 446666 3333 2 24667778888999999988742 100 111111122 222222222222 267
Q ss_pred EEEEeChhHHHHHHHHHhCCCceeeEEEecccc
Q 020064 116 QVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFL 148 (331)
Q Consensus 116 ~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~ 148 (331)
+-+|||+||-+-+.+...++..-++-|+++-..
T Consensus 93 ~~vGHSlGcklhlLi~s~~~~~r~gniliSFNN 125 (250)
T PF07082_consen 93 YGVGHSLGCKLHLLIGSLFDVERAGNILISFNN 125 (250)
T ss_pred eeeecccchHHHHHHhhhccCcccceEEEecCC
Confidence 889999999999988888766667888887543
|
Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis. |
| >cd00519 Lipase_3 Lipase (class 3) | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0019 Score=49.81 Aligned_cols=42 Identities=21% Similarity=0.059 Sum_probs=28.2
Q ss_pred HHHHhCCCcEEEEEeChhHHHHHHHHHhC-----CCceeeEEEeccc
Q 020064 106 LRQHLEIPEWQVFGGSWGSTLALAYSLAH-----PDKVTGLVLRGIF 147 (331)
Q Consensus 106 ~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~-----p~~v~~li~~~~~ 147 (331)
.++.....++++.|||+||.+|..++... +..+..+.+-+|.
T Consensus 121 ~~~~~p~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P~ 167 (229)
T cd00519 121 ALKQYPDYKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQPR 167 (229)
T ss_pred HHhhCCCceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCCC
Confidence 33333456899999999999999988763 2345544444443
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >PLN02162 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.003 Score=52.46 Aligned_cols=54 Identities=19% Similarity=0.223 Sum_probs=36.5
Q ss_pred hHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHh---C-----CCceeeEEEeccccc
Q 020064 96 TWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLA---H-----PDKVTGLVLRGIFLL 149 (331)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~---~-----p~~v~~li~~~~~~~ 149 (331)
+.++.+.+..+++.....++++.|||+||.+|..+|.. + .+++.+++..+.+-.
T Consensus 261 y~~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa~L~~~~~~~l~~~~~~vYTFGqPRV 322 (475)
T PLN02162 261 YYTIRQMLRDKLARNKNLKYILTGHSLGGALAALFPAILAIHGEDELLDKLEGIYTFGQPRV 322 (475)
T ss_pred HHHHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHHHHHHccccccccccceEEEeCCCCc
Confidence 44556666666766666789999999999999987652 1 123445666665443
|
|
| >PLN00413 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0043 Score=51.72 Aligned_cols=54 Identities=15% Similarity=0.340 Sum_probs=39.1
Q ss_pred hHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHh---C-----CCceeeEEEeccccc
Q 020064 96 TWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLA---H-----PDKVTGLVLRGIFLL 149 (331)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~---~-----p~~v~~li~~~~~~~ 149 (331)
..++.+.+..+++.....++++.|||+||.+|..+|.. + ..++.+++..+++-.
T Consensus 267 yy~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~~L~~~~~~~~~~ri~~VYTFG~PRV 328 (479)
T PLN00413 267 YYTILRHLKEIFDQNPTSKFILSGHSLGGALAILFTAVLIMHDEEEMLERLEGVYTFGQPRV 328 (479)
T ss_pred HHHHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHHHHHhccchhhccccceEEEeCCCCC
Confidence 44667778888888777789999999999999998853 1 224556666665443
|
|
| >COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.0041 Score=51.91 Aligned_cols=106 Identities=17% Similarity=0.214 Sum_probs=65.9
Q ss_pred CCCcEEEeccCCCCCCCCCcccc------------cC--C-----CCcEEEEec-CCCCCCCCCCCCCCccchHHHHHHH
Q 020064 44 TGHPVVFLHGGPGGGTTPSNRRF------------FD--P-----DFYRIILFD-QRGAGKSTPHACLDQNTTWDLIDDI 103 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~~~~~~~~------------~~--~-----~g~~vi~~D-~~G~G~s~~~~~~~~~~~~~~~~~~ 103 (331)
+.|.|+++.||+|.+..+...-. .. . ..-.+|-+| .-|.|.|.........+.....+|+
T Consensus 100 ~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~~~e~~~d~~~~~~D~ 179 (498)
T COG2939 100 NRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRALGDEKKKDFEGAGKDV 179 (498)
T ss_pred CCceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccCCceEEEecCcccCcccccccccccchhccchhH
Confidence 46789999999887554322111 10 1 224688899 5589988753322345566666666
Q ss_pred HHHHHHh-------C--CCcEEEEEeChhHHHHHHHHHhCCC---ceeeEEEeccccc
Q 020064 104 EKLRQHL-------E--IPEWQVFGGSWGSTLALAYSLAHPD---KVTGLVLRGIFLL 149 (331)
Q Consensus 104 ~~~~~~~-------~--~~~v~lvG~S~Gg~~a~~~a~~~p~---~v~~li~~~~~~~ 149 (331)
..+.+.+ . ..+.+|+|.|+||.-+..+|..--+ ..++++.+.+...
T Consensus 180 ~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvli 237 (498)
T COG2939 180 YSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVLI 237 (498)
T ss_pred HHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeeee
Confidence 6555432 2 2489999999999988888765433 2555665554433
|
|
| >PLN02517 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.0015 Score=55.76 Aligned_cols=54 Identities=11% Similarity=-0.007 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHh----CCCcEEEEEeChhHHHHHHHHHhCC---------------CceeeEEEeccccch
Q 020064 97 WDLIDDIEKLRQHL----EIPEWQVFGGSWGSTLALAYSLAHP---------------DKVTGLVLRGIFLLR 150 (331)
Q Consensus 97 ~~~~~~~~~~~~~~----~~~~v~lvG~S~Gg~~a~~~a~~~p---------------~~v~~li~~~~~~~~ 150 (331)
+.+-..+..+++.. +.+||+|+||||||.+++.+...-. ..|++.|.++++...
T Consensus 193 d~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~lG 265 (642)
T PLN02517 193 DQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPFLG 265 (642)
T ss_pred hHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHhccccccccCCcchHHHHHHHHHheecccccCC
Confidence 34445555555433 4579999999999999999876321 247889998876543
|
|
| >PLN02454 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.0093 Score=49.15 Aligned_cols=35 Identities=23% Similarity=0.309 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHhCCCc--EEEEEeChhHHHHHHHHHh
Q 020064 99 LIDDIEKLRQHLEIPE--WQVFGGSWGSTLALAYSLA 133 (331)
Q Consensus 99 ~~~~~~~~~~~~~~~~--v~lvG~S~Gg~~a~~~a~~ 133 (331)
+...+..+++.....+ |++.|||+||.+|+.+|..
T Consensus 212 vl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 212 LLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 4444555555554444 9999999999999999864
|
|
| >PLN02571 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.0042 Score=51.16 Aligned_cols=37 Identities=16% Similarity=0.292 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHhCCC--cEEEEEeChhHHHHHHHHHh
Q 020064 97 WDLIDDIEKLRQHLEIP--EWQVFGGSWGSTLALAYSLA 133 (331)
Q Consensus 97 ~~~~~~~~~~~~~~~~~--~v~lvG~S~Gg~~a~~~a~~ 133 (331)
+++.+++..+++....+ ++++.|||+||.+|+.+|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 45667777777776543 68999999999999998875
|
|
| >PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids [] | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.0074 Score=44.27 Aligned_cols=76 Identities=13% Similarity=0.021 Sum_probs=45.4
Q ss_pred CCcEEEEecCCCCCCCCCCCCCCccch----HHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHh--C----CCcee
Q 020064 70 DFYRIILFDQRGAGKSTPHACLDQNTT----WDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLA--H----PDKVT 139 (331)
Q Consensus 70 ~g~~vi~~D~~G~G~s~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~--~----p~~v~ 139 (331)
....+..+++|-..... . ...+. .++...+..........+++|+|+|.|+.++..++.. . .++|.
T Consensus 38 ~~~~~~~V~YpA~~~~~--~--y~~S~~~G~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~ 113 (179)
T PF01083_consen 38 TSVAVQGVEYPASLGPN--S--YGDSVAAGVANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIA 113 (179)
T ss_dssp CEEEEEE--S---SCGG--S--CHHHHHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEE
T ss_pred CeeEEEecCCCCCCCcc--c--ccccHHHHHHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEE
Confidence 44666667777432221 0 11233 3344444444455556799999999999999999877 2 35799
Q ss_pred eEEEeccccc
Q 020064 140 GLVLRGIFLL 149 (331)
Q Consensus 140 ~li~~~~~~~ 149 (331)
++++++-+..
T Consensus 114 avvlfGdP~~ 123 (179)
T PF01083_consen 114 AVVLFGDPRR 123 (179)
T ss_dssp EEEEES-TTT
T ss_pred EEEEecCCcc
Confidence 9999986554
|
Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A .... |
| >PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.0088 Score=43.40 Aligned_cols=54 Identities=20% Similarity=0.147 Sum_probs=42.4
Q ss_pred hHHHHHHHHHHHHHhC-----CCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccc
Q 020064 96 TWDLIDDIEKLRQHLE-----IPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLL 149 (331)
Q Consensus 96 ~~~~~~~~~~~~~~~~-----~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~ 149 (331)
.+.-+.++..+++.|. ..++.++|||+|+.++-.++...+..+..+|+++++..
T Consensus 87 A~~ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG~ 145 (177)
T PF06259_consen 87 ARAGAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPGM 145 (177)
T ss_pred HHHHHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCCC
Confidence 4556667777776653 23789999999999999998886778999999987654
|
Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates. |
| >PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.0089 Score=44.35 Aligned_cols=65 Identities=12% Similarity=-0.055 Sum_probs=43.6
Q ss_pred CCcEEEEecCCCCCCCCCC-----C--CCCccchHHHHHHHHHHHHHhCC-CcEEEEEeChhHHHHHHHHHhC
Q 020064 70 DFYRIILFDQRGAGKSTPH-----A--CLDQNTTWDLIDDIEKLRQHLEI-PEWQVFGGSWGSTLALAYSLAH 134 (331)
Q Consensus 70 ~g~~vi~~D~~G~G~s~~~-----~--~~~~~~~~~~~~~~~~~~~~~~~-~~v~lvG~S~Gg~~a~~~a~~~ 134 (331)
.-.+|++|=+|-....... . ......+.|+.+.+...+++.+. ++++|+|||.|+.+..++...+
T Consensus 44 ~~~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 44 GVCNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred cCCccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 4567888887743211111 0 00123456677777778888754 5899999999999999998875
|
|
| >PLN02408 phospholipase A1 | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.0078 Score=48.86 Aligned_cols=37 Identities=22% Similarity=0.215 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHhCCC--cEEEEEeChhHHHHHHHHHhC
Q 020064 98 DLIDDIEKLRQHLEIP--EWQVFGGSWGSTLALAYSLAH 134 (331)
Q Consensus 98 ~~~~~~~~~~~~~~~~--~v~lvG~S~Gg~~a~~~a~~~ 134 (331)
++.+.+..+++....+ ++++.|||+||.+|..+|...
T Consensus 183 qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl 221 (365)
T PLN02408 183 MVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDI 221 (365)
T ss_pred HHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHH
Confidence 3455666677666543 599999999999999988753
|
|
| >PLN02934 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.01 Score=50.02 Aligned_cols=37 Identities=19% Similarity=0.343 Sum_probs=30.4
Q ss_pred hHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHH
Q 020064 96 TWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSL 132 (331)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~ 132 (331)
.+.+...+..+++.....++++.|||+||.+|..+|.
T Consensus 304 y~~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 304 YYAVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHH
Confidence 3456677777787777779999999999999999875
|
|
| >PLN02310 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.019 Score=47.33 Aligned_cols=37 Identities=22% Similarity=0.307 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHHhC----CCcEEEEEeChhHHHHHHHHHh
Q 020064 97 WDLIDDIEKLRQHLE----IPEWQVFGGSWGSTLALAYSLA 133 (331)
Q Consensus 97 ~~~~~~~~~~~~~~~----~~~v~lvG~S~Gg~~a~~~a~~ 133 (331)
+++.+.+..+++.+. ..++++.|||+||.+|+.+|..
T Consensus 189 ~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 189 EQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 345566667776653 1379999999999999988854
|
|
| >KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.0087 Score=49.57 Aligned_cols=55 Identities=16% Similarity=0.040 Sum_probs=38.9
Q ss_pred hHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCC--------ceeeEEEeccccch
Q 020064 96 TWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPD--------KVTGLVLRGIFLLR 150 (331)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~--------~v~~li~~~~~~~~ 150 (331)
+..+..-++...+.-|.+||+|++||||+.+.+.+...+++ .|++.+.++++...
T Consensus 165 l~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyFl~w~~~~~~~W~~k~I~sfvnig~p~lG 227 (473)
T KOG2369|consen 165 LSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYFLKWVEAEGPAWCDKYIKSFVNIGAPWLG 227 (473)
T ss_pred HHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHHHhcccccchhHHHHHHHHHHccCchhcC
Confidence 33344444444444466899999999999999999988876 36777777665543
|
|
| >COG2830 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.059 Score=37.68 Aligned_cols=78 Identities=10% Similarity=-0.006 Sum_probs=47.5
Q ss_pred cEEEeccCCCCCCCCCcccccCCCCc-EEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCcEEEEEeChhHH
Q 020064 47 PVVFLHGGPGGGTTPSNRRFFDPDFY-RIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGST 125 (331)
Q Consensus 47 ~vl~~HG~~~~~~~~~~~~~~~~~g~-~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~ 125 (331)
.||+.-|++..+...... .+.+++ -++++|+...... .++. ..+.+.+|++|||-+
T Consensus 13 LIvyFaGwgtpps~v~HL--ilpeN~dl~lcYDY~dl~ld--------fDfs-------------Ay~hirlvAwSMGVw 69 (214)
T COG2830 13 LIVYFAGWGTPPSAVNHL--ILPENHDLLLCYDYQDLNLD--------FDFS-------------AYRHIRLVAWSMGVW 69 (214)
T ss_pred EEEEEecCCCCHHHHhhc--cCCCCCcEEEEeehhhcCcc--------cchh-------------hhhhhhhhhhhHHHH
Confidence 667777766544332222 123444 4677888743211 1111 124678999999999
Q ss_pred HHHHHHHhCCCceeeEEEeccccc
Q 020064 126 LALAYSLAHPDKVTGLVLRGIFLL 149 (331)
Q Consensus 126 ~a~~~a~~~p~~v~~li~~~~~~~ 149 (331)
+|-++.... +++..+.+++...
T Consensus 70 vAeR~lqg~--~lksatAiNGTgL 91 (214)
T COG2830 70 VAERVLQGI--RLKSATAINGTGL 91 (214)
T ss_pred HHHHHHhhc--cccceeeecCCCC
Confidence 999998876 4777777776544
|
|
| >PLN02324 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.015 Score=47.91 Aligned_cols=36 Identities=11% Similarity=0.212 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHhCCC--cEEEEEeChhHHHHHHHHHh
Q 020064 98 DLIDDIEKLRQHLEIP--EWQVFGGSWGSTLALAYSLA 133 (331)
Q Consensus 98 ~~~~~~~~~~~~~~~~--~v~lvG~S~Gg~~a~~~a~~ 133 (331)
++.+.+..+++....+ +|++.|||+||.+|+.+|..
T Consensus 198 qVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 198 QVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 3455666677766533 69999999999999999864
|
|
| >PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.015 Score=42.19 Aligned_cols=67 Identities=15% Similarity=0.107 Sum_probs=50.6
Q ss_pred hccccccccEEEEecCCCCccCCcchHHHHHhC---C--CCcEEEecCCCCCCCc--CCchhHHHHHHHHHHHh
Q 020064 260 NIDNIRHINATIVQGRYDVCCPMMSAWDLHKAW---P--EADFKVVADAGHSANE--PGIAAELVATNEKLKNL 326 (331)
Q Consensus 260 ~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~---~--~~~~~~~~~~gH~~~~--~~~~~~~~~~i~~fl~~ 326 (331)
...+|++++.|-|-|++|.++.+.......+.+ | ....++.+|+||+-.. ....+++.-.|.+|+.+
T Consensus 128 dp~aI~~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~ 201 (202)
T PF06850_consen 128 DPAAIRRTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQ 201 (202)
T ss_pred chHHcccceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHh
Confidence 455666788999999999999987666555554 4 2456778999998644 34577889999999864
|
This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid. |
| >PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ] | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.13 Score=44.31 Aligned_cols=88 Identities=13% Similarity=-0.012 Sum_probs=58.9
Q ss_pred ccccCCCCcEEEEecCCCCCCCCC--C--CCCCccc--------hHHHHHHHHHHHHHh-C--CCcEEEEEeChhHHHHH
Q 020064 64 RRFFDPDFYRIILFDQRGAGKSTP--H--ACLDQNT--------TWDLIDDIEKLRQHL-E--IPEWQVFGGSWGSTLAL 128 (331)
Q Consensus 64 ~~~~~~~g~~vi~~D~~G~G~s~~--~--~~~~~~~--------~~~~~~~~~~~~~~~-~--~~~v~lvG~S~Gg~~a~ 128 (331)
....+++||.++.-|- ||..+.. . ....... +.+.+.--+++++.+ + .+.-+..|.|-||.-++
T Consensus 52 ~~~~~~~G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl 130 (474)
T PF07519_consen 52 MATALARGYATASTDS-GHQGSAGSDDASFGNNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGL 130 (474)
T ss_pred cchhhhcCeEEEEecC-CCCCCcccccccccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHH
Confidence 3445579999999994 6665533 1 1111111 122222233444443 3 34688999999999999
Q ss_pred HHHHhCCCceeeEEEeccccchhh
Q 020064 129 AYSLAHPDKVTGLVLRGIFLLRKK 152 (331)
Q Consensus 129 ~~a~~~p~~v~~li~~~~~~~~~~ 152 (331)
..|+++|+.++|+|.-+|......
T Consensus 131 ~~AQryP~dfDGIlAgaPA~~~~~ 154 (474)
T PF07519_consen 131 MAAQRYPEDFDGILAGAPAINWTH 154 (474)
T ss_pred HHHHhChhhcCeEEeCCchHHHHH
Confidence 999999999999999999876543
|
It also includes several bacterial homologues of unknown function. |
| >PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.038 Score=44.77 Aligned_cols=40 Identities=20% Similarity=0.171 Sum_probs=32.3
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhCCC-----ceeeEEEeccccch
Q 020064 111 EIPEWQVFGGSWGSTLALAYSLAHPD-----KVTGLVLRGIFLLR 150 (331)
Q Consensus 111 ~~~~v~lvG~S~Gg~~a~~~a~~~p~-----~v~~li~~~~~~~~ 150 (331)
+.+||.|+|||+|+.+...+.....+ .|+.+++++.+...
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~ 262 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPS 262 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCC
Confidence 66789999999999999888765443 38999999876654
|
|
| >TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2 | Back alignment and domain information |
|---|
Probab=95.81 E-value=1 Score=38.24 Aligned_cols=105 Identities=16% Similarity=0.114 Sum_probs=65.2
Q ss_pred EEEEeCCCCCCCcEEEeccCCCCCCC--CCcccccCCCCcE-EEEecCCCCCCCCCCCCCCccc-hHHHHHHHHHHHHHh
Q 020064 35 IYWEQSGNPTGHPVVFLHGGPGGGTT--PSNRRFFDPDFYR-IILFDQRGAGKSTPHACLDQNT-TWDLIDDIEKLRQHL 110 (331)
Q Consensus 35 l~~~~~g~~~~~~vl~~HG~~~~~~~--~~~~~~~~~~g~~-vi~~D~~G~G~s~~~~~~~~~~-~~~~~~~~~~~~~~~ 110 (331)
++|...|+-+.|..|+..|.-....+ +.....+ |.. .+.-|.|=-|.+--.. ... -..+.+-|.+.++.|
T Consensus 279 ~yYFnPGD~KPPL~VYFSGyR~aEGFEgy~MMk~L---g~PfLL~~DpRleGGaFYlG---s~eyE~~I~~~I~~~L~~L 352 (511)
T TIGR03712 279 IYYFNPGDFKPPLNVYFSGYRPAEGFEGYFMMKRL---GAPFLLIGDPRLEGGAFYLG---SDEYEQGIINVIQEKLDYL 352 (511)
T ss_pred EEecCCcCCCCCeEEeeccCcccCcchhHHHHHhc---CCCeEEeeccccccceeeeC---cHHHHHHHHHHHHHHHHHh
Confidence 44555565455667888886443332 2222222 323 4455777776664222 112 345677788889999
Q ss_pred CCC--cEEEEEeChhHHHHHHHHHhCCCceeeEEEeccc
Q 020064 111 EIP--EWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIF 147 (331)
Q Consensus 111 ~~~--~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~ 147 (331)
|.+ .++|-|-|||..-|+.+++... ..++|+--|.
T Consensus 353 gF~~~qLILSGlSMGTfgAlYYga~l~--P~AIiVgKPL 389 (511)
T TIGR03712 353 GFDHDQLILSGLSMGTFGALYYGAKLS--PHAIIVGKPL 389 (511)
T ss_pred CCCHHHeeeccccccchhhhhhcccCC--CceEEEcCcc
Confidence 875 6999999999999999998862 4455554443
|
This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >PLN02802 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.019 Score=48.42 Aligned_cols=37 Identities=22% Similarity=0.300 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHhCCC--cEEEEEeChhHHHHHHHHHhC
Q 020064 98 DLIDDIEKLRQHLEIP--EWQVFGGSWGSTLALAYSLAH 134 (331)
Q Consensus 98 ~~~~~~~~~~~~~~~~--~v~lvG~S~Gg~~a~~~a~~~ 134 (331)
++.+.+..+++....+ +|++.|||+||.+|..+|...
T Consensus 313 qVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~dL 351 (509)
T PLN02802 313 SVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADEL 351 (509)
T ss_pred HHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHHH
Confidence 3445566666665432 689999999999999888753
|
|
| >KOG2521 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=95.75 E-value=0.14 Score=41.57 Aligned_cols=62 Identities=10% Similarity=-0.006 Sum_probs=50.4
Q ss_pred ccEEEEecCCCCccCCcchHHHHHhC----CCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhhh
Q 020064 267 INATIVQGRYDVCCPMMSAWDLHKAW----PEADFKVVADAGHSANEPGIAAELVATNEKLKNLIK 328 (331)
Q Consensus 267 ~P~l~i~G~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~ 328 (331)
.+.+.+++..|.++|.+..+++.+.. -+++.+-+.++-|..+....|..+.+...+|++...
T Consensus 226 ~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r~~p~~y~~~~~~Fl~~~~ 291 (350)
T KOG2521|consen 226 WNQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFRSFPKTYLKKCSEFLRSVI 291 (350)
T ss_pred ccceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeeccCcHHHHHHHHHHHHhcc
Confidence 78899999999999999888885554 235555667899998887779999999999998653
|
|
| >KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=95.70 E-value=0.11 Score=41.02 Aligned_cols=127 Identities=19% Similarity=0.301 Sum_probs=80.4
Q ss_pred ceeEeCCCceEEEEeC----CC-CCCCcEEEeccCCCCCCC----CCcccccC---C-------CCcEEEEecCC-CCCC
Q 020064 25 GILKVSDIHTIYWEQS----GN-PTGHPVVFLHGGPGGGTT----PSNRRFFD---P-------DFYRIILFDQR-GAGK 84 (331)
Q Consensus 25 ~~~~~~~g~~l~~~~~----g~-~~~~~vl~~HG~~~~~~~----~~~~~~~~---~-------~g~~vi~~D~~-G~G~ 84 (331)
.++++.++.++.|+.+ .. ...|..+.+.|+++++.. +...-++. + +.-.++-+|-| |.|.
T Consensus 6 g~v~vr~~a~~F~wly~~~~~~ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk~adllfvDnPVGaGf 85 (414)
T KOG1283|consen 6 GYVDVRTGAHMFWWLYYATANVKSERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLKDADLLFVDNPVGAGF 85 (414)
T ss_pred cceeeecCceEEEEEeeeccccccCCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhhhccEEEecCCCcCce
Confidence 4566777766665433 22 345678999997765432 11111111 1 34567777776 7888
Q ss_pred CCCCCC-CCccchHHHHHHHHHHHHHh-------CCCcEEEEEeChhHHHHHHHHHhCC---------CceeeEEEeccc
Q 020064 85 STPHAC-LDQNTTWDLIDDIEKLRQHL-------EIPEWQVFGGSWGSTLALAYSLAHP---------DKVTGLVLRGIF 147 (331)
Q Consensus 85 s~~~~~-~~~~~~~~~~~~~~~~~~~~-------~~~~v~lvG~S~Gg~~a~~~a~~~p---------~~v~~li~~~~~ 147 (331)
|..... ....+..+++.|+.++++.+ .-.+++|+..|+||-++..++...- -.+.++++-++.
T Consensus 86 SyVdg~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDSW 165 (414)
T KOG1283|consen 86 SYVDGSSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDSW 165 (414)
T ss_pred eeecCcccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCcc
Confidence 864332 12345678899999998875 3348999999999999988876431 246778877765
Q ss_pred cchh
Q 020064 148 LLRK 151 (331)
Q Consensus 148 ~~~~ 151 (331)
..+.
T Consensus 166 ISP~ 169 (414)
T KOG1283|consen 166 ISPE 169 (414)
T ss_pred cChh
Confidence 5543
|
|
| >PLN02753 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.67 E-value=0.022 Score=48.23 Aligned_cols=36 Identities=19% Similarity=0.301 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHhCC-----CcEEEEEeChhHHHHHHHHHh
Q 020064 98 DLIDDIEKLRQHLEI-----PEWQVFGGSWGSTLALAYSLA 133 (331)
Q Consensus 98 ~~~~~~~~~~~~~~~-----~~v~lvG~S~Gg~~a~~~a~~ 133 (331)
++.+.+..+++.... -+|.+.|||+||.+|+.+|..
T Consensus 292 QVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 292 QILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred HHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHH
Confidence 445556666666542 379999999999999999853
|
|
| >PLN03037 lipase class 3 family protein; Provisional | Back alignment and domain information |
|---|
Probab=95.52 E-value=0.026 Score=47.77 Aligned_cols=36 Identities=19% Similarity=0.385 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHhCC----CcEEEEEeChhHHHHHHHHHh
Q 020064 98 DLIDDIEKLRQHLEI----PEWQVFGGSWGSTLALAYSLA 133 (331)
Q Consensus 98 ~~~~~~~~~~~~~~~----~~v~lvG~S~Gg~~a~~~a~~ 133 (331)
++.+++..+++.+.. .++.+.|||+||.+|+..|..
T Consensus 299 QVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 299 QVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 455677777766641 269999999999999998854
|
|
| >PLN02719 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.50 E-value=0.028 Score=47.52 Aligned_cols=36 Identities=19% Similarity=0.302 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHhCC-----CcEEEEEeChhHHHHHHHHHh
Q 020064 98 DLIDDIEKLRQHLEI-----PEWQVFGGSWGSTLALAYSLA 133 (331)
Q Consensus 98 ~~~~~~~~~~~~~~~-----~~v~lvG~S~Gg~~a~~~a~~ 133 (331)
++.+.+..+++.... .+|.+.|||+||.+|+.+|..
T Consensus 278 QVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 278 QVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 345556666666542 279999999999999998854
|
|
| >PLN02761 lipase class 3 family protein | Back alignment and domain information |
|---|
Probab=95.37 E-value=0.033 Score=47.25 Aligned_cols=36 Identities=22% Similarity=0.332 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHhC-----C-CcEEEEEeChhHHHHHHHHHh
Q 020064 98 DLIDDIEKLRQHLE-----I-PEWQVFGGSWGSTLALAYSLA 133 (331)
Q Consensus 98 ~~~~~~~~~~~~~~-----~-~~v~lvG~S~Gg~~a~~~a~~ 133 (331)
++.+.|..+++... . -+|++.|||+||.+|+.+|..
T Consensus 273 qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~D 314 (527)
T PLN02761 273 QVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYD 314 (527)
T ss_pred HHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHH
Confidence 45556666666652 1 269999999999999988853
|
|
| >PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=95.18 E-value=0.047 Score=44.70 Aligned_cols=112 Identities=20% Similarity=0.198 Sum_probs=79.3
Q ss_pred eEEEEeCCCCCCCcEEEeccCCCCC--CCCCcccccCCCCcEEEEecCCCCCCCCCCC-CCCccchHHHHHHHHHHHHHh
Q 020064 34 TIYWEQSGNPTGHPVVFLHGGPGGG--TTPSNRRFFDPDFYRIILFDQRGAGKSTPHA-CLDQNTTWDLIDDIEKLRQHL 110 (331)
Q Consensus 34 ~l~~~~~g~~~~~~vl~~HG~~~~~--~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~-~~~~~~~~~~~~~~~~~~~~~ 110 (331)
++.....+. +.|+|+..-|..-+. ........+ +-+-+.+++|-+|.|.+.+ +....++++-++|...+++.+
T Consensus 53 RvtLlHk~~-drPtV~~T~GY~~~~~p~r~Ept~Ll---d~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~ 128 (448)
T PF05576_consen 53 RVTLLHKDF-DRPTVLYTEGYNVSTSPRRSEPTQLL---DGNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAF 128 (448)
T ss_pred EEEEEEcCC-CCCeEEEecCcccccCccccchhHhh---ccceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHH
Confidence 334444443 568888888844332 112222222 3467889999999998655 344578899999998888776
Q ss_pred C---CCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccc
Q 020064 111 E---IPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLL 149 (331)
Q Consensus 111 ~---~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~ 149 (331)
. .++.+--|-|=||+.++.+=.-+|+.|.+.|.--.+..
T Consensus 129 K~iY~~kWISTG~SKGGmTa~y~rrFyP~DVD~tVaYVAP~~ 170 (448)
T PF05576_consen 129 KPIYPGKWISTGGSKGGMTAVYYRRFYPDDVDGTVAYVAPND 170 (448)
T ss_pred HhhccCCceecCcCCCceeEEEEeeeCCCCCCeeeeeecccc
Confidence 4 35888899999999999888888999999997766543
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ]. |
| >KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.89 E-value=0.01 Score=48.24 Aligned_cols=34 Identities=18% Similarity=0.205 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHH
Q 020064 98 DLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYS 131 (331)
Q Consensus 98 ~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a 131 (331)
..++++.+.+....++++-.+|||+||+++-.+.
T Consensus 135 Rla~~~~e~~~~~si~kISfvghSLGGLvar~AI 168 (405)
T KOG4372|consen 135 RLAEEVKETLYDYSIEKISFVGHSLGGLVARYAI 168 (405)
T ss_pred ccHHHHhhhhhccccceeeeeeeecCCeeeeEEE
Confidence 4555555555555678999999999998876554
|
|
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.85 E-value=0.77 Score=43.47 Aligned_cols=97 Identities=16% Similarity=0.124 Sum_probs=62.4
Q ss_pred CCCCcEEEeccCCCCCCC-CCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCC-CcEEEEEe
Q 020064 43 PTGHPVVFLHGGPGGGTT-PSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEI-PEWQVFGG 120 (331)
Q Consensus 43 ~~~~~vl~~HG~~~~~~~-~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~lvG~ 120 (331)
++.|++.|+|...+.... ..++..+ ..|.||.-..... ...++++.++....-++++.. .+..++|+
T Consensus 2121 se~~~~Ffv~pIEG~tt~l~~la~rl----------e~PaYglQ~T~~v-P~dSies~A~~yirqirkvQP~GPYrl~GY 2189 (2376)
T KOG1202|consen 2121 SEEPPLFFVHPIEGFTTALESLASRL----------EIPAYGLQCTEAV-PLDSIESLAAYYIRQIRKVQPEGPYRLAGY 2189 (2376)
T ss_pred ccCCceEEEeccccchHHHHHHHhhc----------CCcchhhhccccC-CcchHHHHHHHHHHHHHhcCCCCCeeeecc
Confidence 367889999996554332 2222222 2344443322211 245788888877666777654 58999999
Q ss_pred ChhHHHHHHHHHhC--CCceeeEEEeccccch
Q 020064 121 SWGSTLALAYSLAH--PDKVTGLVLRGIFLLR 150 (331)
Q Consensus 121 S~Gg~~a~~~a~~~--p~~v~~li~~~~~~~~ 150 (331)
|+|+.++..+|... .+....+|++++.+..
T Consensus 2190 SyG~~l~f~ma~~Lqe~~~~~~lillDGspty 2221 (2376)
T KOG1202|consen 2190 SYGACLAFEMASQLQEQQSPAPLILLDGSPTY 2221 (2376)
T ss_pred chhHHHHHHHHHHHHhhcCCCcEEEecCchHH
Confidence 99999999998754 2345668998876543
|
|
| >PLN02847 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=94.72 E-value=0.067 Score=46.20 Aligned_cols=28 Identities=14% Similarity=0.073 Sum_probs=21.5
Q ss_pred HHHHhCCCcEEEEEeChhHHHHHHHHHh
Q 020064 106 LRQHLEIPEWQVFGGSWGSTLALAYSLA 133 (331)
Q Consensus 106 ~~~~~~~~~v~lvG~S~Gg~~a~~~a~~ 133 (331)
.++....-+++++|||+||.+|..++..
T Consensus 244 al~~~PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 244 ALDEYPDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred HHHHCCCCeEEEeccChHHHHHHHHHHH
Confidence 3334444589999999999999988765
|
|
| >PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein | Back alignment and domain information |
|---|
Probab=94.72 E-value=0.045 Score=36.39 Aligned_cols=33 Identities=27% Similarity=0.385 Sum_probs=17.8
Q ss_pred eeEeCCCceEEEEeCCC--CCCCcEEEeccCCCCC
Q 020064 26 ILKVSDIHTIYWEQSGN--PTGHPVVFLHGGPGGG 58 (331)
Q Consensus 26 ~~~~~~g~~l~~~~~g~--~~~~~vl~~HG~~~~~ 58 (331)
+...-+|..||+...-+ ++..||||+||+++|-
T Consensus 71 f~t~I~g~~iHFih~rs~~~~aiPLll~HGWPgSf 105 (112)
T PF06441_consen 71 FKTEIDGLDIHFIHVRSKRPNAIPLLLLHGWPGSF 105 (112)
T ss_dssp EEEEETTEEEEEEEE--S-TT-EEEEEE--SS--G
T ss_pred eeEEEeeEEEEEEEeeCCCCCCeEEEEECCCCccH
Confidence 33333577998875542 3456899999999873
|
Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A. |
| >KOG4569 consensus Predicted lipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.69 E-value=0.065 Score=43.80 Aligned_cols=37 Identities=24% Similarity=0.157 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHh
Q 020064 97 WDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLA 133 (331)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~ 133 (331)
..+.+++..+++....-++.+.|||+||.+|..+|..
T Consensus 155 ~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHH
Confidence 4677788888888887789999999999999998875
|
|
| >PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE) | Back alignment and domain information |
|---|
Probab=93.87 E-value=0.49 Score=36.21 Aligned_cols=78 Identities=14% Similarity=0.046 Sum_probs=44.3
Q ss_pred CcEEEEecCCCC-CC-CCCCCCCCccchHHHHHHHHHHHHH-h-CCCcEEEEEeChhHHHHHHHHHhCCC------ceee
Q 020064 71 FYRIILFDQRGA-GK-STPHACLDQNTTWDLIDDIEKLRQH-L-EIPEWQVFGGSWGSTLALAYSLAHPD------KVTG 140 (331)
Q Consensus 71 g~~vi~~D~~G~-G~-s~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~v~lvG~S~Gg~~a~~~a~~~p~------~v~~ 140 (331)
|+.+..+++|.. +- +.........+..+=++.+.+.++. . ..++++++|+|+|+.++...+.+.-. ..-.
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~~~~l~ 81 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRLAADGDPPPDDLS 81 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHHHhcCCCCcCceE
Confidence 567777888761 11 0001101233445555555555554 1 23689999999999999988766411 2334
Q ss_pred EEEecccc
Q 020064 141 LVLRGIFL 148 (331)
Q Consensus 141 li~~~~~~ 148 (331)
+|+++-+.
T Consensus 82 fVl~gnP~ 89 (225)
T PF08237_consen 82 FVLIGNPR 89 (225)
T ss_pred EEEecCCC
Confidence 66665443
|
A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands []. |
| >KOG2029 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=92.88 E-value=0.71 Score=39.99 Aligned_cols=38 Identities=24% Similarity=0.255 Sum_probs=27.3
Q ss_pred CCcEEEEEeChhHHHHHHHHHh-----CCC------ceeeEEEeccccc
Q 020064 112 IPEWQVFGGSWGSTLALAYSLA-----HPD------KVTGLVLRGIFLL 149 (331)
Q Consensus 112 ~~~v~lvG~S~Gg~~a~~~a~~-----~p~------~v~~li~~~~~~~ 149 (331)
.++++.+||||||.++=.+... .|+ ..+|+|+++.+-.
T Consensus 525 ~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~PHr 573 (697)
T KOG2029|consen 525 DRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVPHR 573 (697)
T ss_pred CCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecCCC
Confidence 4589999999999888766543 233 3677888877643
|
|
| >COG4947 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=92.81 E-value=0.12 Score=36.78 Aligned_cols=46 Identities=17% Similarity=0.075 Sum_probs=37.4
Q ss_pred HHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccc
Q 020064 104 EKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLL 149 (331)
Q Consensus 104 ~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~ 149 (331)
..+++..=.....+-|.||||..|..+..++|+.+.++|.+++...
T Consensus 92 rYv~eEalpgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYd 137 (227)
T COG4947 92 RYVIEEALPGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYD 137 (227)
T ss_pred HHHHHhhcCCCccccccchhhhhhhhhheeChhHhhhheeecceee
Confidence 3344444335678889999999999999999999999999998654
|
|
| >KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=90.91 E-value=0.3 Score=42.07 Aligned_cols=100 Identities=18% Similarity=0.031 Sum_probs=55.9
Q ss_pred CCCcEEEeccCCCCCCC----CCccc-ccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHH---HHhC--CC
Q 020064 44 TGHPVVFLHGGPGGGTT----PSNRR-FFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLR---QHLE--IP 113 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~~----~~~~~-~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~---~~~~--~~ 113 (331)
++-.|+-+|||+-.... ....+ ...+-|..|+.+|+.---+.+- ....++..-....++ ..+| .+
T Consensus 395 S~sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL~cPiiSVdYSLAPEaPF-----PRaleEv~fAYcW~inn~allG~TgE 469 (880)
T KOG4388|consen 395 SRSLIVHCHGGGFVAQSSKSHEPYLRSWAQALGCPIISVDYSLAPEAPF-----PRALEEVFFAYCWAINNCALLGSTGE 469 (880)
T ss_pred CceEEEEecCCceeeeccccccHHHHHHHHHhCCCeEEeeeccCCCCCC-----CcHHHHHHHHHHHHhcCHHHhCcccc
Confidence 33457888997643222 11111 1123689999999864433332 223444433333444 3344 36
Q ss_pred cEEEEEeChhHHHHHHHHHh----CCCceeeEEEecccc
Q 020064 114 EWQVFGGSWGSTLALAYSLA----HPDKVTGLVLRGIFL 148 (331)
Q Consensus 114 ~v~lvG~S~Gg~~a~~~a~~----~p~~v~~li~~~~~~ 148 (331)
+|+++|-|.||.+.+..+.+ .-...+|+++.-++.
T Consensus 470 riv~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~pt 508 (880)
T KOG4388|consen 470 RIVLAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYPPT 508 (880)
T ss_pred eEEEeccCCCcceeehhHHHHHHhCCCCCCceEEecChh
Confidence 99999999999766555443 222346777765543
|
|
| >KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=90.83 E-value=0.68 Score=36.09 Aligned_cols=30 Identities=17% Similarity=0.162 Sum_probs=23.8
Q ss_pred HHHHhCCCcEEEEEeChhHHHHHHHHHhCC
Q 020064 106 LRQHLEIPEWQVFGGSWGSTLALAYSLAHP 135 (331)
Q Consensus 106 ~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p 135 (331)
+.+.....++.+-|||+||.+|..+..++.
T Consensus 269 v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T KOG4540|consen 269 VRRIYPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred HHHhCCCceEEEeccccchHHHHHhccccC
Confidence 334445568999999999999999988874
|
|
| >COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism] | Back alignment and domain information |
|---|
Probab=90.83 E-value=0.68 Score=36.09 Aligned_cols=30 Identities=17% Similarity=0.162 Sum_probs=23.8
Q ss_pred HHHHhCCCcEEEEEeChhHHHHHHHHHhCC
Q 020064 106 LRQHLEIPEWQVFGGSWGSTLALAYSLAHP 135 (331)
Q Consensus 106 ~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p 135 (331)
+.+.....++.+-|||+||.+|..+..++.
T Consensus 269 v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T COG5153 269 VRRIYPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred HHHhCCCceEEEeccccchHHHHHhccccC
Confidence 334445568999999999999999988874
|
|
| >PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ] | Back alignment and domain information |
|---|
Probab=88.30 E-value=1.2 Score=38.43 Aligned_cols=62 Identities=13% Similarity=0.016 Sum_probs=46.9
Q ss_pred cccEEEEecCCCCccCCcchHHHHHhC----C--------CCcEEEecCCCCCCCcC-CchhHHHHHHHHHHHhh
Q 020064 266 HINATIVQGRYDVCCPMMSAWDLHKAW----P--------EADFKVVADAGHSANEP-GIAAELVATNEKLKNLI 327 (331)
Q Consensus 266 ~~P~l~i~G~~D~~~~~~~~~~~~~~~----~--------~~~~~~~~~~gH~~~~~-~~~~~~~~~i~~fl~~~ 327 (331)
.-.+++.||..|.++|+.....+.+++ . -.++..+||.+|+.--. ..+-..+..|.+|.++-
T Consensus 353 GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~G 427 (474)
T PF07519_consen 353 GGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVENG 427 (474)
T ss_pred CCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhCC
Confidence 478999999999999999887777654 2 14678889999997543 12556777888887653
|
It also includes several bacterial homologues of unknown function. |
| >KOG2385 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=86.58 E-value=2.2 Score=36.51 Aligned_cols=43 Identities=16% Similarity=0.120 Sum_probs=33.5
Q ss_pred HhCCCcEEEEEeChhHHHHHHHHHhC-----CCceeeEEEeccccchh
Q 020064 109 HLEIPEWQVFGGSWGSTLALAYSLAH-----PDKVTGLVLRGIFLLRK 151 (331)
Q Consensus 109 ~~~~~~v~lvG~S~Gg~~a~~~a~~~-----p~~v~~li~~~~~~~~~ 151 (331)
..|.+||.|||+|+|+-+.+.+.... -+.|..+++++.|....
T Consensus 443 ~qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~k 490 (633)
T KOG2385|consen 443 SQGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPTK 490 (633)
T ss_pred ccCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccCC
Confidence 34778999999999999998766532 23589999999877654
|
|
| >COG3933 Transcriptional antiterminator [Transcription] | Back alignment and domain information |
|---|
Probab=81.21 E-value=2.3 Score=35.68 Aligned_cols=89 Identities=9% Similarity=0.043 Sum_probs=66.5
Q ss_pred CcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCcEEEEEeChhHH
Q 020064 46 HPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGST 125 (331)
Q Consensus 46 ~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~ 125 (331)
..||+.||....++....+..++..+. +.++|+| -+.+..+..+.+.+.+++.+..+=.++=..||..
T Consensus 110 ~vIiiAHG~sTASSmaevanrLL~~~~-~~aiDMP-----------Ldvsp~~vle~l~e~~k~~~~~~GlllLVDMGSL 177 (470)
T COG3933 110 KVIIIAHGYSTASSMAEVANRLLGEEI-FIAIDMP-----------LDVSPSDVLEKLKEYLKERDYRSGLLLLVDMGSL 177 (470)
T ss_pred eEEEEecCcchHHHHHHHHHHHhhccc-eeeecCC-----------CcCCHHHHHHHHHHHHHhcCccCceEEEEecchH
Confidence 468999998877778888888887774 8999998 4678889999999999999888767777899988
Q ss_pred HHHHHHHh--CCCceeeEEEecc
Q 020064 126 LALAYSLA--HPDKVTGLVLRGI 146 (331)
Q Consensus 126 ~a~~~a~~--~p~~v~~li~~~~ 146 (331)
..+.=... ..-.++-+=.+++
T Consensus 178 ~~f~~~i~~~~~ipv~~i~nVST 200 (470)
T COG3933 178 TSFGSIISEEFGIPVKVIPNVST 200 (470)
T ss_pred HHHHHHHHHHhCCceEEEecccH
Confidence 77654433 3333444444443
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 331 | ||||
| 1azw_A | 313 | Proline Iminopeptidase From Xanthomonas Campestris | 1e-101 | ||
| 1qtr_A | 317 | Crystal Structure Analysis Of The Prolyl Aminopepti | 2e-98 | ||
| 2d0d_A | 282 | Crystal Structure Of A Meta-Cleavage Product Hydrol | 3e-07 | ||
| 3e3a_A | 293 | The Structure Of Rv0554 From Mycobacterium Tubercul | 4e-07 | ||
| 1iun_A | 282 | Meta-Cleavage Product Hydrolase From Pseudomonas Fl | 9e-07 | ||
| 3hea_A | 271 | The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS E | 3e-05 | ||
| 3hi4_A | 271 | Switching Catalysis From Hydrolysis To Perhydrolysi | 3e-05 | ||
| 1u2e_A | 289 | Crystal Structure Of The C-C Bond Hydrolase Mhpc Le | 4e-05 | ||
| 3nwo_A | 330 | Crystal Structure Of Proline Iminopeptidase Mycobac | 5e-05 | ||
| 3oos_A | 278 | The Structure Of An AlphaBETA FOLD FAMILY HYDROLASE | 8e-05 | ||
| 1a8s_A | 273 | Chloroperoxidase FPROPIONATE COMPLEX Length = 273 | 2e-04 | ||
| 2zjf_A | 362 | Crystal Structure Of Mycobacterium Tuberculosis Epo | 2e-04 | ||
| 2e3j_A | 356 | The Crystal Structure Of Epoxide Hydrolase B (Rv193 | 2e-04 | ||
| 2yys_A | 286 | Crystal Structure Of The Proline Iminopeptidase-Rel | 2e-04 | ||
| 1mtz_A | 293 | Crystal Structure Of The Tricorn Interacting Factor | 3e-04 | ||
| 1xrl_A | 293 | Crystal Structure Of Active Site F1-Mutant Y205f Co | 3e-04 | ||
| 1xrm_A | 293 | Crystal Structure Of Active Site F1-Mutant E213q So | 3e-04 | ||
| 1xrq_A | 293 | Crystal Structure Of Active Site F1-Mutant E245q So | 3e-04 | ||
| 1bro_A | 277 | Bromoperoxidase A2 Length = 277 | 4e-04 | ||
| 3t4u_A | 271 | L29i Mutation In An Aryl Esterase From Pseudomonas | 4e-04 | ||
| 3ia2_A | 271 | Pseudomonas Fluorescens Esterase Complexed To The R | 4e-04 | ||
| 1va4_A | 279 | Pseudomonas Fluorescens Aryl Esterase Length = 279 | 4e-04 | ||
| 1brt_A | 277 | Bromoperoxidase A2 Mutant M99t Length = 277 | 5e-04 | ||
| 1xqw_A | 293 | Crystal Structure Of F1-Mutant S105a Complex With P | 7e-04 |
| >pdb|1AZW|A Chain A, Proline Iminopeptidase From Xanthomonas Campestris Pv. Citri Length = 313 | Back alignment and structure |
|
| >pdb|1QTR|A Chain A, Crystal Structure Analysis Of The Prolyl Aminopeptidase From Serratia Marcescens Length = 317 | Back alignment and structure |
|
| >pdb|2D0D|A Chain A, Crystal Structure Of A Meta-Cleavage Product Hydrolase (Cumd) A129v Mutant Length = 282 | Back alignment and structure |
|
| >pdb|3E3A|A Chain A, The Structure Of Rv0554 From Mycobacterium Tuberculosis Length = 293 | Back alignment and structure |
|
| >pdb|1IUN|A Chain A, Meta-Cleavage Product Hydrolase From Pseudomonas Fluorescens Ip01 (Cumd) S103a Mutant Hexagonal Length = 282 | Back alignment and structure |
|
| >pdb|3HEA|A Chain A, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE Length = 271 | Back alignment and structure |
|
| >pdb|3HI4|A Chain A, Switching Catalysis From Hydrolysis To Perhydrolysis In P. Fluorescens Esterase Length = 271 | Back alignment and structure |
|
| >pdb|1U2E|A Chain A, Crystal Structure Of The C-C Bond Hydrolase Mhpc Length = 289 | Back alignment and structure |
|
| >pdb|3NWO|A Chain A, Crystal Structure Of Proline Iminopeptidase Mycobacterium Smegmatis Length = 330 | Back alignment and structure |
|
| >pdb|3OOS|A Chain A, The Structure Of An AlphaBETA FOLD FAMILY HYDROLASE FROM BACILLUS Anthracis Str. Sterne Length = 278 | Back alignment and structure |
|
| >pdb|1A8S|A Chain A, Chloroperoxidase FPROPIONATE COMPLEX Length = 273 | Back alignment and structure |
|
| >pdb|2ZJF|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Epoxide Hydrolase B Complexed With An Inhibitor Length = 362 | Back alignment and structure |
|
| >pdb|2E3J|A Chain A, The Crystal Structure Of Epoxide Hydrolase B (Rv1938) From Mycobacterium Tuberculosis At 2.1 Angstrom Length = 356 | Back alignment and structure |
|
| >pdb|2YYS|A Chain A, Crystal Structure Of The Proline Iminopeptidase-Related Protein Ttha1809 From Thermus Thermophilus Hb8 Length = 286 | Back alignment and structure |
|
| >pdb|1MTZ|A Chain A, Crystal Structure Of The Tricorn Interacting Factor F1 Length = 293 | Back alignment and structure |
|
| >pdb|1XRL|A Chain A, Crystal Structure Of Active Site F1-Mutant Y205f Complex With Inhibitor Pck Length = 293 | Back alignment and structure |
|
| >pdb|1XRM|A Chain A, Crystal Structure Of Active Site F1-Mutant E213q Soaked With Peptide Ala-Phe Length = 293 | Back alignment and structure |
|
| >pdb|1XRQ|A Chain A, Crystal Structure Of Active Site F1-Mutant E245q Soaked With Peptide Phe-Leu Length = 293 | Back alignment and structure |
|
| >pdb|1BRO|A Chain A, Bromoperoxidase A2 Length = 277 | Back alignment and structure |
|
| >pdb|3T4U|A Chain A, L29i Mutation In An Aryl Esterase From Pseudomonas Fluorescens Leads To Unique Peptide Flip And Increased Activity Length = 271 | Back alignment and structure |
|
| >pdb|3IA2|A Chain A, Pseudomonas Fluorescens Esterase Complexed To The R-Enantiomer Of A Sulfonate Transition State Analog Length = 271 | Back alignment and structure |
|
| >pdb|1VA4|A Chain A, Pseudomonas Fluorescens Aryl Esterase Length = 279 | Back alignment and structure |
|
| >pdb|1BRT|A Chain A, Bromoperoxidase A2 Mutant M99t Length = 277 | Back alignment and structure |
|
| >pdb|1XQW|A Chain A, Crystal Structure Of F1-Mutant S105a Complex With Phe-Leu Length = 293 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A* Length = 317 | Back alignment and structure |
|---|
Score = 386 bits (992), Expect = e-135
Identities = 164/310 (52%), Positives = 216/310 (69%), Gaps = 1/310 (0%)
Query: 14 NLYPYVEPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYR 73
LYP + Y +G L D H IYWE SGNP G P VF+HGGPGGG +P +R+ FDP+ Y+
Sbjct: 6 GLYPPLAAYDSGWLDTGDGHRIYWELSGNPNGKPAVFIHGGPGGGISPHHRQLFDPERYK 65
Query: 74 IILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLA 133
++LFDQRG G+S PHA LD NTTW L+ DIE+LR+ + +W VFGGSWGSTLALAY+
Sbjct: 66 VLLFDQRGCGRSRPHASLDNNTTWHLVADIERLREMAGVEQWLVFGGSWGSTLALAYAQT 125
Query: 134 HPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRL 193
HP++V+ +VLRGIF LRK+ + W+Y+ GA+ +P+ WE ++ ++ER + AY +RL
Sbjct: 126 HPERVSEMVLRGIFTLRKQRLHWYYQDGASRFFPEKWERVLSILSDDERKDVIAAYRQRL 185
Query: 194 NSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPS 253
S D + Q AA+ W+ WE T LLP+ E+ GEDD F+LAFARIENHYF + GF S
Sbjct: 186 TSADPQVQLEAAKLWSVWEGETVTLLPSRESASFGEDD-FALAFARIENHYFTHLGFLES 244
Query: 254 DSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIA 313
D LL N+ IRHI A IV GRYD+ C + +AWDL KAWPEA+ +V AGHS +EPGI
Sbjct: 245 DDQLLRNVPLIRHIPAVIVHGRYDMACQVQNAWDLAKAWPEAELHIVEGAGHSYDEPGIL 304
Query: 314 AELVATNEKL 323
+L+ ++
Sbjct: 305 HQLMIATDRF 314
|
| >1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7 Length = 313 | Back alignment and structure |
|---|
Score = 373 bits (959), Expect = e-130
Identities = 176/310 (56%), Positives = 218/310 (70%)
Query: 14 NLYPYVEPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYR 73
LYP + PY G LKV D HT+Y+EQ GNP G PVV LHGGPGGG RRF DP YR
Sbjct: 3 TLYPEITPYQQGSLKVDDRHTLYFEQCGNPHGKPVVMLHGGPGGGCNDKMRRFHDPAKYR 62
Query: 74 IILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLA 133
I+LFDQRG+G+STPHA L NTTWDL+ DIE+LR HL + WQVFGGSWGSTLALAY+
Sbjct: 63 IVLFDQRGSGRSTPHADLVDNTTWDLVADIERLRTHLGVDRWQVFGGSWGSTLALAYAQT 122
Query: 134 HPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRL 193
HP +VT LVLRGIFLLR+ E++WFY+ GA+ ++PDAWE + + IP ER+ + A+ +RL
Sbjct: 123 HPQQVTELVLRGIFLLRRFELEWFYQEGASRLFPDAWEHYLNAIPPVERADLMSAFHRRL 182
Query: 194 NSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPS 253
SDD+ T+ AAA+AW+ WE T+ L +E+ + ED F+LAFARIENHYF+N GFF
Sbjct: 183 TSDDEATRLAAAKAWSVWEGATSFLHVDEDFVTGHEDAHFALAFARIENHYFVNGGFFEV 242
Query: 254 DSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIA 313
+ LL + I I IV GRYDV CP+ SAWDLHKAWP+A ++ +GHSA EP
Sbjct: 243 EDQLLRDAHRIADIPGVIVHGRYDVVCPLQSAWDLHKAWPKAQLQISPASGHSAFEPENV 302
Query: 314 AELVATNEKL 323
LV +
Sbjct: 303 DALVRATDGF 312
|
| >1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A Length = 293 | Back alignment and structure |
|---|
Score = 332 bits (853), Expect = e-114
Identities = 59/304 (19%), Positives = 107/304 (35%), Gaps = 25/304 (8%)
Query: 20 EPYSTGILKVSDIHTIYWEQSGNPTG-HPVVFLHGGPGGGTTPS-NRRFFDPDFYRIILF 77
+ KV+ IY++ P ++ +HGGPG + R + ++ +
Sbjct: 3 QECIENYAKVNG-IYIYYKLCKAPEEKAKLMTMHGGPGMSHDYLLSLRDMTKEGITVLFY 61
Query: 78 DQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPE-WQVFGGSWGSTLALAYSLAHPD 136
DQ G G+S + T +++ E LR L E + G S+G LALAY++ + D
Sbjct: 62 DQFGCGRSEEPDQ-SKFTIDYGVEEAEALRSKLFGNEKVFLMGSSYGGALALAYAVKYQD 120
Query: 137 KVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSD 196
+ GL++ G + + + +RD I + + +
Sbjct: 121 HLKGLIVSGGLSSVPLTVKEMNR-----LIDELPAKYRDAIKKYGS---------SGSYE 166
Query: 197 DKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSF 256
+ E Q A + + + + P + + F G D
Sbjct: 167 NPEYQEAVNYFYHQHLLRSEDWPPEVLKSLEYAERRNVYRIMNG-PNEFTITGTI-KDWD 224
Query: 257 LLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSAN--EPGIAA 314
+ D I I I I G YD P A +H+ ++ V D H +
Sbjct: 225 ITDKISAI-KIPTLITVGEYDEVTP-NVARVIHEKIAGSELHVFRDCSHLTMWEDREGYN 282
Query: 315 ELVA 318
+L++
Sbjct: 283 KLLS 286
|
| >2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus} Length = 286 | Back alignment and structure |
|---|
Score = 285 bits (731), Expect = 4e-96
Identities = 58/301 (19%), Positives = 92/301 (30%), Gaps = 41/301 (13%)
Query: 24 TGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFD-PDFYRIILFDQRGA 82
G + V + +Y E G G + LHGGPGG D + +R++ FDQRG+
Sbjct: 5 IGYVPVGE-AELYVEDVGPVEGPALFVLHGGPGGNAYVLREGLQDYLEGFRVVYFDQRGS 63
Query: 83 GKSTPHAC-LDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGL 141
G+S T L++D L + L + + + +G+ +AL P +
Sbjct: 64 GRSLELPQDPRLFTVDALVEDTLLLAEALGVERFGLLAHGFGAVVALEVLRRFPQAEGAI 123
Query: 142 VLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQ 201
+L G A PD E+ ++ + E A RL +
Sbjct: 124 LLAPWVNFPWLAARLAEAAGLAP-LPDPEENLKEALKREEP----KALFDRLMFPT--PR 176
Query: 202 YAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNI 261
A W D LAF R D
Sbjct: 177 GRMAYEWLAEGAGILG------------SDAPGLAFLRNGLWRL-------------DYT 211
Query: 262 DNIRHIN--ATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSAN--EPGIAAELV 317
+ ++ G D + + A +V+ +AGH P E
Sbjct: 212 PYLTPERRPLYVLVGERDGTSYPYAEEVASR--LRAPIRVLPEAGHYLWIDAPEAFEEAF 269
Query: 318 A 318
Sbjct: 270 K 270
|
| >3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis} Length = 278 | Back alignment and structure |
|---|
Score = 268 bits (688), Expect = 1e-89
Identities = 60/302 (19%), Positives = 108/302 (35%), Gaps = 36/302 (11%)
Query: 22 YSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDP--DFYRIILFDQ 79
++T I+K + G G P+ H F +P D Y + L +
Sbjct: 3 WTTNIIKTPR-GKFEYFLKGE--GPPLCVTHLYSEYNDNG--NTFANPFTDHYSVYLVNL 57
Query: 80 RGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVT 139
+G G S + + + I D+E +R+ L I +W G S G LAL Y+ + +T
Sbjct: 58 KGCGNSDSAKNDSEYSMTETIKDLEAIREALYINKWGFAGHSAGGMLALVYATEAQESLT 117
Query: 140 GLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDD-- 197
+++ G ++ Y +IY F ++ + LN D
Sbjct: 118 KIIVGGAAASKE------YASHKDSIYCSKNVKFNRIV----------SIMNALNDDSTV 161
Query: 198 KETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFL 257
+E + A +R W +EE ++ S +YF + D
Sbjct: 162 QEERKALSREWALMS------FYSEEKLEEALKLPNSGKTVGNRLNYFRQVEYKDYD--- 212
Query: 258 LDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSAN--EPGIAAE 315
+ I + I G++DV CP + + ++ P A ++ H+ E +
Sbjct: 213 VRQKLKFVKIPSFIYCGKHDVQCPYIFSCEIANLIPNATLTKFEESNHNPFVEEIDKFNQ 272
Query: 316 LV 317
V
Sbjct: 273 FV 274
|
| >3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis} Length = 330 | Back alignment and structure |
|---|
Score = 265 bits (678), Expect = 2e-87
Identities = 57/317 (17%), Positives = 102/317 (32%), Gaps = 30/317 (9%)
Query: 13 TNLYPYVEPYSTGILKVSDIHT---IYWEQSGNPTGHPVVFLHGGPGGGTT--PSNRRFF 67
P S+ + D T + ++ P P++ LHGGPG +
Sbjct: 19 PGSMLSRMPVSSRTVPFGDHETWVQVTTPENAQPHALPLIVLHGGPGMAHNYVANIAALA 78
Query: 68 DPDFYRIILFDQRGAGKST--PHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGST 125
D +I +DQ G G ST P A D T +D+ + L I + V G SWG
Sbjct: 79 DETGRTVIHYDQVGCGNSTHLPDAPADFWTPQLFVDEFHAVCTALGIERYHVLGQSWGGM 138
Query: 126 LALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCF 185
L ++ P + L + + ++ +A R +P R+
Sbjct: 139 LGAEIAVRQPSGLVSLAICNSP-------------ASMRLWSEAAGDLRAQLPAETRA-A 184
Query: 186 VDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYF 245
+D + + AAA + + + + + ++ + F
Sbjct: 185 LDRHEAAGTITHPDYLQAAAEFYRRHVCRVVPTPQDFADSVAQMEAEPTVYHTMNGPNEF 244
Query: 246 LNKGFFPSDSFLLDNIDNIRHINA--TIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADA 303
G ID + + A ++ G +D P + P+ V
Sbjct: 245 HVVGTLGDW----SVIDRLPDVTAPVLVIAGEHDEATP-KTWQPFVDHIPDVRSHVFPGT 299
Query: 304 GHSAN--EPGIAAELVA 318
H + +P +VA
Sbjct: 300 SHCTHLEKPEEFRAVVA 316
|
| >3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni} Length = 272 | Back alignment and structure |
|---|
Score = 104 bits (261), Expect = 3e-26
Identities = 45/289 (15%), Positives = 86/289 (29%), Gaps = 44/289 (15%)
Query: 34 TIYWEQSGNPTGHPVVFLHGGPGGGTTPSN--RRFFDPDFYRIILFDQRGAGKSTPHACL 91
I + G+ G P++FLHG + + Y+ I D G G S P +
Sbjct: 12 NISYFSIGS--GTPIIFLHGLSLDKQSTCLFFEPLSNVGQYQRIYLDLPGMGNSDPIS-- 67
Query: 92 DQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRK 151
+ L IE + + + + ++G S+G LA A + D+ G+ L +
Sbjct: 68 PSTSDNVLETLIEAIEEIIGARRFILYGHSYGGYLAQAIAFHLKDQTLGVFLTCPVITAD 127
Query: 152 KEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKW 211
+ D+ P + F D S + +++
Sbjct: 128 HSKRLTGKHINILE--------EDINPVENKEYFADFLSMNVIINNQAWHDY-------- 171
Query: 212 EMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINAT- 270
+ I G +++N+Y + + NI +
Sbjct: 172 ----------QNLIIPGLQKEDKTFIDQLQNNYSFT---------FEEKLKNINYQFPFK 212
Query: 271 IVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSAN--EPGIAAELV 317
I+ GR D L + ++ GH+ +
Sbjct: 213 IMVGRNDQVVGYQEQLKLINHNENGEIVLLNRTGHNLMIDQREAVGFHF 261
|
| >3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus} Length = 262 | Back alignment and structure |
|---|
Score = 93.6 bits (233), Expect = 2e-22
Identities = 51/292 (17%), Positives = 90/292 (30%), Gaps = 59/292 (20%)
Query: 34 TIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDP------DFYRIILFDQRGAGKSTP 87
I +E+SG +G PVV + G R P + +I +D+RG G S
Sbjct: 14 PIAFERSG--SGPPVVLVGGALS------TRAGGAPLAERLAPHFTVICYDRRGRGDSGD 65
Query: 88 HACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIF 147
I+D+ + + VFG S G+ L+L + + V +
Sbjct: 66 TP---PYAVEREIEDLAAIIDAAGGAAF-VFGMSSGAGLSLLAAASGLPITRLAVFEPPY 121
Query: 148 LLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARA 207
+ + + PD L+ E R V + + A +
Sbjct: 122 AV---------DDSRPPVPPDYQTRLDALLAEGRRGDAVTYFMTEGVGVPPDL-VAQMQQ 171
Query: 208 WTKWEMMTAHLLPNE-ENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRH 266
W M A ++ G++ I + FA I P
Sbjct: 172 APMWPGMEAVAHTLPYDHAVMGDNTIPTARFASIS---------IP-------------- 208
Query: 267 INATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVA 318
++ G +A +L P A + + + H +A + +A
Sbjct: 209 --TLVMDGGASPAWIRHTAQELADTIPNARYVTLENQTH-----TVAPDAIA 253
|
| >1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A* Length = 298 | Back alignment and structure |
|---|
Score = 94.1 bits (234), Expect = 2e-22
Identities = 47/319 (14%), Positives = 99/319 (31%), Gaps = 51/319 (15%)
Query: 23 STGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDF--------YRI 74
S I+ D+ ++ + G+P ++ + GG + + +F +
Sbjct: 2 SERIVPSGDV-ELWSDDFGDPADPALLLVMGGNL------SALGWPDEFARRLADGGLHV 54
Query: 75 ILFDQRGAGKST-PHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLA 133
I +D R G+ST +L D + + V G S G+T+ +L
Sbjct: 55 IRYDHRDTGRSTTRDFAAHPYGFGELAADAVAVLDGWGVDRAHVVGLSMGATITQVIALD 114
Query: 134 HPDKVTGLVLRGIFLLRKKEID-WFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKR 192
H D+++ L + + + A L
Sbjct: 115 HHDRLSSLTM----------LLGGGLDIDFDANIERVMRGEPTLDGLPGPQQPFLDALAL 164
Query: 193 LNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFP 252
+N + A+ +KW +++ +P ++ +AR E + G
Sbjct: 165 MNQPAEGRAAEVAKRVSKWRILSGTGVPFDDA-----------EYARWEERAIDHAGGVL 213
Query: 253 SDSF--------LLDNIDNIRHINA--TIVQGRYDVCCPMMSAWDLHKAWPEADFKVVAD 302
++ + +R + ++Q +D P L P A +
Sbjct: 214 AEPYAHYSLTLPPPSRAAELREVTVPTLVIQAEHDPIAPAPHGKHLAGLIPTARLAEIPG 273
Query: 303 AGHSANE---PGIAAELVA 318
GH+ +A ++A
Sbjct: 274 MGHALPSSVHGPLAEVILA 292
|
| >3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} Length = 281 | Back alignment and structure |
|---|
Score = 92.1 bits (229), Expect = 1e-21
Identities = 59/299 (19%), Positives = 99/299 (33%), Gaps = 50/299 (16%)
Query: 21 PYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDF-------YR 73
T + IY+E G TG PVV +HG P + R ++ YR
Sbjct: 5 AKITVGTENQAPIEIYYEDHG--TGKPVVLIHGWPL------SGRSWEYQVPALVEAGYR 56
Query: 74 IILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAY-SL 132
+I +D+RG GKS+ + D+ +L + LE+ + G S G Y S
Sbjct: 57 VITYDRRGFGKSSQPW--EGYEYDTFTSDLHQLLEQLELQNVTLVGFSMGGGEVARYIST 114
Query: 133 AHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKR 192
D++ +V G + + EG E+F+ + + R F+D ++K
Sbjct: 115 YGTDRIEKVVFAGAVPPYLYKSEDHPEGALD---DATIETFKSGVIND-RLAFLDEFTKG 170
Query: 193 LNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFP 252
+ T + + A A + F
Sbjct: 171 FFAAGDRTDLVSESFRLYNWDIAAG--------------------ASPKGTLDCITAFSK 210
Query: 253 SDSFLLDNIDNIRHIN--ATIVQGRYDVCCP-MMSAWDLHKAWPEADFKVVADAGHSAN 308
+D ++ N I+ G D P S H+A P + ++ H N
Sbjct: 211 TDFR-----KDLEKFNIPTLIIHGDSDATVPFEYSGKLTHEAIPNSKVALIKGGPHGLN 264
|
| >1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli} Length = 289 | Back alignment and structure |
|---|
Score = 91.2 bits (227), Expect = 2e-21
Identities = 65/316 (20%), Positives = 104/316 (32%), Gaps = 51/316 (16%)
Query: 1 MMESGKELPELNTNLYPYVEPYSTGILKVSDIHTIYWEQ-SGNPTGHPVVFLHGGPGGGT 59
MM S + E T+ + VE + IH + + G+ VV LHG G T
Sbjct: 1 MM-SYQPQTEAATSRFLNVEEAGKTL----RIH--FNDCGQGDE---TVVLLHGSGPGAT 50
Query: 60 TPSN-RRFFDPDF---YRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEW 115
+N R DP YR+IL D G GKS + ++ + L+I +
Sbjct: 51 GWANFSRNIDPLVEAGYRVILLDCPGWGKSDSVVNSGSRSD-LNARILKSVVDQLDIAKI 109
Query: 116 QVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRD 175
+ G S G ++A++L P++V LVL G +
Sbjct: 110 HLLGNSMGGHSSVAFTLKWPERVGKLVL----------------MGGGTGGMSLFTPMP- 152
Query: 176 LIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSL 235
KRLN ++ + + + + +
Sbjct: 153 -----------TEGIKRLNQLYRQPTIENLKLMMDI-FVFDTSDLTDALF----EARLNN 196
Query: 236 AFARIENHYFLNKGFFPSDSFLLDNIDNIRHINA-T-IVQGRYDVCCPMMSAWDLHKAWP 293
+R ++ K + D + I A T IV GR D PM + L
Sbjct: 197 MLSRRDHLENFVKSLEANPKQFPDFGPRLAEIKAQTLIVWGRNDRFVPMDAGLRLLSGIA 256
Query: 294 EADFKVVADAGHSANE 309
++ + D GH A
Sbjct: 257 GSELHIFRDCGHWAQW 272
|
| >2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A Length = 254 | Back alignment and structure |
|---|
Score = 89.3 bits (222), Expect = 6e-21
Identities = 52/296 (17%), Positives = 94/296 (31%), Gaps = 70/296 (23%)
Query: 23 STGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTT--PSNRRFFDPDFYRIILFDQR 80
++ + V+ + ++++Q+G H V+ L G G G T + + + ++ +D R
Sbjct: 3 TSAKVAVNGV-QLHYQQTGEG-DHAVLLLPGMLGSGETDFGPQLKNLNKKLFTVVAWDPR 60
Query: 81 GAGKST-PHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVT 139
G G S P + D L + L+ + + G S G AL + +P +
Sbjct: 61 GYGHSRPPDRDFPADFFERDAKDAVDLMKALKFKKVSLLGWSDGGITALIAAAKYPSYIH 120
Query: 140 GLVLRGIFLLRKKEIDWFYEGGAAAIYPD----AWESFRDLIPENERSCFVDAYSKRLNS 195
+V+ GA A D +E RD+ +ER
Sbjct: 121 KMVI----------------WGANAYVTDEDSMIYEGIRDVSKWSER--TRKPLEALYGY 162
Query: 196 DDKETQYAAARAWTKW-EMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSD 254
D AR KW + + + NI R
Sbjct: 163 D------YFARTCEKWVDGIRQFKHLPDGNICR--------------------------- 189
Query: 255 SFLLDNIDNIRHINA-T-IVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSAN 308
+ + IV G D P A +HK + ++ + H+ +
Sbjct: 190 -------HLLPRVQCPALIVHGEKDPLVPRFHADFIHKHVKGSRLHLMPEGKHNLH 238
|
| >1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12 Length = 274 | Back alignment and structure |
|---|
Score = 88.9 bits (221), Expect = 1e-20
Identities = 53/293 (18%), Positives = 93/293 (31%), Gaps = 51/293 (17%)
Query: 27 LKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDF-------YRIILFDQ 79
D I+++ G G PVVF+HG P N + YR I D+
Sbjct: 3 CTTRDGVEIFYKDWG--QGRPVVFIHGWPL------NGDAWQDQLKAVVDAGYRGIAHDR 54
Query: 80 RGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAY-SLAHPDKV 138
RG G STP D DD+ L L++ + + S G Y ++
Sbjct: 55 RGHGHSTPVW--DGYDFDTFADDLNDLLTDLDLRDVTLVAHSMGGGELARYVGRHGTGRL 112
Query: 139 TGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDK 198
VL + D +G + + +++ ++ + ERS F ++ S ++
Sbjct: 113 RSAVLLSAIPPVMIKSDKNPDG----VPDEVFDALKNGV-LTERSQFWKDTAEGFFSANR 167
Query: 199 ETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLL 258
+ M IE F +D
Sbjct: 168 PGNKVTQGNKDAFWYMAMA--------------------QTIEGGVRCVDAFGYTDFT-- 205
Query: 259 DNIDNIRHIN--ATIVQGRYDVCCPM-MSAWDLHKAWPEADFKVVADAGHSAN 308
++++ + +V G D P+ + + P A+ KV + H
Sbjct: 206 ---EDLKKFDIPTLVVHGDDDQVVPIDATGRKSAQIIPNAELKVYEGSSHGIA 255
|
| >1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12 Length = 275 | Back alignment and structure |
|---|
Score = 88.9 bits (221), Expect = 1e-20
Identities = 60/296 (20%), Positives = 94/296 (31%), Gaps = 56/296 (18%)
Query: 25 GILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDF-------YRIILF 77
G + SD I+++ G G PVVF HG P + +D YR+I
Sbjct: 1 GTVTTSDGTNIFYKDWGPRDGLPVVFHHGWPL------SADDWDNQMLFFLSHGYRVIAH 54
Query: 78 DQRGAGKST-PHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSW-GSTLALAYSLAHP 135
D+RG G+S P + D+ L + L++ G S G +A + A P
Sbjct: 55 DRRGHGRSDQPSTG---HDMDTYAADVAALTEALDLRGAVHIGHSTGGGEVARYVARAEP 111
Query: 136 DKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRL-- 193
+V VL + D +G + ++ FR + N ++D S
Sbjct: 112 GRVAKAVLVSAVPPVMVKSDTNPDGLPL----EVFDEFRAALAANRAQFYIDVPSGPFYG 167
Query: 194 -NSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFP 252
N + W MM A HY F
Sbjct: 168 FNREGATVSQGLIDHWWLQGMMGAA-----------------------NAHYECIAAFSE 204
Query: 253 SDSFLLDNIDNIRHINA--TIVQGRYDVCCPM-MSAWDLHKAWPEADFKVVADAGH 305
+D D+++ I+ + G D P +A + A K H
Sbjct: 205 TDFT-----DDLKRIDVPVLVAHGTDDQVVPYADAAPKSAELLANATLKSYEGLPH 255
|
| >1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A Length = 282 | Back alignment and structure |
|---|
Score = 88.9 bits (221), Expect = 1e-20
Identities = 56/282 (19%), Positives = 104/282 (36%), Gaps = 53/282 (18%)
Query: 33 HTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDF---YRIILFDQRGAGKSTPHA 89
+ G G PV+ +HG G + +N R P YR+I D G G +
Sbjct: 15 VLTNYHDVG--EGQPVILIHGSGPGVSAYANWRLTIPALSKFYRVIAPDMVGFGFTDRPE 72
Query: 90 CLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVL---RGI 146
+ + +D I + LEI + + G ++G LA+A +L + ++V +VL G
Sbjct: 73 NYNY-SKDSWVDHIIGIMDALEIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGT 131
Query: 147 FLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDD-KETQYAAA 205
+ ++ + Y + E+ R+L+ + AY + L +D+ +Y A+
Sbjct: 132 RFDVTEGLNAVWG------YTPSIENMRNLLD-------IFAYDRSLVTDELARLRYEAS 178
Query: 206 RAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIR 265
E +F+ + + L + ++I+
Sbjct: 179 IQPGFQE-----------------------SFSSM-----FPEPRQRWIDALASSDEDIK 210
Query: 266 HINA--TIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGH 305
+ I+ GR D P+ S+ L + A V GH
Sbjct: 211 TLPNETLIIHGREDQVVPLSSSLRLGELIDRAQLHVFGRCGH 252
|
| >1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A* Length = 279 | Back alignment and structure |
|---|
Score = 88.6 bits (220), Expect = 1e-20
Identities = 55/293 (18%), Positives = 100/293 (34%), Gaps = 38/293 (12%)
Query: 22 YSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTT-PSNRRFFDPDFYRIILFDQR 80
Y T + S +Y+E G +G PVV +HG P G + R YR+I +D+R
Sbjct: 2 YITVGNENSTPIELYYEDQG--SGQPVVLIHGYPLDGHSWERQTRELLAQGYRVITYDRR 59
Query: 81 GAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAY-SLAHPDKVT 139
G G S+ D+ + + L++ + + G S G+ Y + ++V
Sbjct: 60 GFGGSSKVN--TGYDYDTFAADLHTVLETLDLRDVVLVGFSMGTGELARYVARYGHERVA 117
Query: 140 GLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRL---NSD 196
L + D EG + ++ + +R + + K + +
Sbjct: 118 KLAFLASLEPFLVQRDDNPEGVP----QEVFDGIEAAA-KGDRFAWFTDFYKNFYNLDEN 172
Query: 197 DKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSF 256
A + + + + + +D F SD
Sbjct: 173 LGSRISEQAVTGSWNVAIGSAPVAAYAVVPAWIED-------------------FRSD-- 211
Query: 257 LLDNIDNIRHINATIVQGRYDVCCPM-MSAWDLHKAWPEADFKVVADAGHSAN 308
++ + I+ G D P+ +A H+A PEAD+ V A H
Sbjct: 212 -VEAVRAAG-KPTLILHGTKDNILPIDATARRFHQAVPEADYVEVEGAPHGLL 262
|
| >3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A Length = 293 | Back alignment and structure |
|---|
Score = 89.0 bits (221), Expect = 2e-20
Identities = 60/280 (21%), Positives = 102/280 (36%), Gaps = 45/280 (16%)
Query: 34 TIYWEQSGNPTGHPVVFLHGGPGGGTT--PSNRRFFDPDFYRIILFDQRGAGKSTPHACL 91
+ ++ +G TG PVVF+ G G G T P F YR I FD RG G +
Sbjct: 34 NLAYDDNG--TGDPVVFIAGRGGAGRTWHPHQVPAFLAAGYRCITFDNRGIGATENA--- 88
Query: 92 DQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRK 151
+ TT ++ D L + L+I +V G S G+ +A + P+ V+ VL
Sbjct: 89 EGFTTQTMVADTAALIETLDIAPARVVGVSMGAFIAQELMVVAPELVSSAVLMATRGRLD 148
Query: 152 KEIDWFYEGGAAAIYPDAWESFRDLIPENE-RSCFVDAYSKRLNSDDKETQYAAARAWTK 210
+ +F + A ++S L P + R+ ++ +S++ +DD A W
Sbjct: 149 RARQFFNKAEAE-----LYDSGVQLPPTYDARARLLENFSRKTLNDD-----VAVGDWIA 198
Query: 211 WEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINA- 269
M + ++ + + R+I A
Sbjct: 199 MFSMWPI--KSTPGLRC--------QLDCAPQT---------------NRLPAYRNIAAP 233
Query: 270 T-IVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSAN 308
++ DV P ++ A P + + DAGH
Sbjct: 234 VLVIGFADDVVTPPYLGREVADALPNGRYLQIPDAGHLGF 273
|
| >3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A Length = 456 | Back alignment and structure |
|---|
Score = 90.6 bits (225), Expect = 2e-20
Identities = 55/299 (18%), Positives = 100/299 (33%), Gaps = 50/299 (16%)
Query: 21 PYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDF-------YR 73
P+ T + S +Y+E G TG PVV +HG P + ++ YR
Sbjct: 2 PFITVGQENSTSIDLYYEDHG--TGVPVVLIHGFPL------SGHSWERQSAALLDAGYR 53
Query: 74 IILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAY-SL 132
+I +D+RG G+S+ D+ + + L++ + + G S G+ Y S
Sbjct: 54 VITYDRRGFGQSS--QPTTGYDYDTFAADLNTVLETLDLQDAVLVGFSMGTGEVARYVSS 111
Query: 133 AHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKR 192
++ + + D +G A + ++ + + R F +
Sbjct: 112 YGTARIAAVAFLASLEPFLLKTDDNPDGAAPQ---EFFDGIVAAVKAD-RYAFYTGFFND 167
Query: 193 LNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFP 252
+ D+ + + TA A ++
Sbjct: 168 FYNLDENLGTRISEEAVRNSWNTA-------------------ASGGFFAAAAAPTTWYT 208
Query: 253 SDSFLLDNIDNIRHIN--ATIVQGRYDVCCPM-MSAWDLHKAWPEADFKVVADAGHSAN 308
D +I I+ A I+ G D P+ +A HKA P A++ V A H
Sbjct: 209 ------DFRADIPRIDVPALILHGTGDRTLPIENTARVFHKALPSAEYVEVEGAPHGLL 261
|
| >2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A Length = 286 | Back alignment and structure |
|---|
Score = 88.6 bits (220), Expect = 2e-20
Identities = 58/279 (20%), Positives = 90/279 (32%), Gaps = 42/279 (15%)
Query: 33 HTIYWEQSGNPTGHPVVFLHGGPGGGTTPSN-RRFFDPDF---YRIILFDQRGAGKSTPH 88
I++ ++GN G V+ LHGG G SN R P YR+IL D G KS
Sbjct: 23 FNIHYNEAGN--GETVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVILKDSPGFNKSDAV 80
Query: 89 ACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFL 148
+Q ++ L L+I + G + G AL ++L +PD++ L+L
Sbjct: 81 VMDEQRGL-VNARAVKGLMDALDIDRAHLVGNAMGGATALNFALEYPDRIGKLIL----- 134
Query: 149 LRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAW 208
G + P + K L E Y +
Sbjct: 135 -----------MGPGGLGPSMFAPMPMEG------------IKLLFKLYAEPSYETLKQM 171
Query: 209 TKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHIN 268
+ + L EE + + + E+ + D + I
Sbjct: 172 LQV-FLYDQSLITEELL----QGRWEAIQRQPEHLKNFLISAQKAPLSTWDVTARLGEIK 226
Query: 269 A-T-IVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGH 305
A T I GR D P+ L +A V + G
Sbjct: 227 AKTFITWGRDDRFVPLDHGLKLLWNIDDARLHVFSKCGA 265
|
| >1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10 Length = 285 | Back alignment and structure |
|---|
Score = 88.1 bits (219), Expect = 3e-20
Identities = 46/283 (16%), Positives = 82/283 (28%), Gaps = 37/283 (13%)
Query: 33 HTIYWEQSGNPTGHPVVFLHGGPGGGTTPSN-RRFFDP--DFYRIILFDQRGAGKSTPHA 89
+ +G+P VV LHG G SN R + + ++ D G G+S
Sbjct: 17 LASHALVAGDPQSPAVVLLHGAGPGAHAASNWRPIIPDLAENFFVVAPDLIGFGQSEYPE 76
Query: 90 CLDQN---TTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGI 146
+ ++ I L H I + + G S G + L + P++ + L G
Sbjct: 77 TYPGHIMSWVGMRVEQILGLMNHFGIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGS 136
Query: 147 FLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAAR 206
A +R+LI S D + + ++++ A
Sbjct: 137 VGAPMNARPPELARLLAFYADPRLTPYRELI----HSFVYDPENFPGMEEIVKSRFEVAN 192
Query: 207 AWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRH 266
+ + I R+ +
Sbjct: 193 DPEVRRIQEVMFESMKAG--MESLVIPPATLGRLPH---------D-------------- 227
Query: 267 INATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANE 309
+ GR D P+ ++ L K A+ V+ GH A
Sbjct: 228 --VLVFHGRQDRIVPLDTSLYLTKHLKHAELVVLDRCGHWAQL 268
|
| >2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A* Length = 276 | Back alignment and structure |
|---|
Score = 87.5 bits (217), Expect = 4e-20
Identities = 34/301 (11%), Positives = 78/301 (25%), Gaps = 54/301 (17%)
Query: 29 VSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDP------DFYRIILFDQRGA 82
V D Y + + G ++ L G + R + +R+I+ + RG
Sbjct: 11 VFDNKLSYIDNQRDTDGPAILLLPGWCH------DHRVYKYLIQELDADFRVIVPNWRGH 64
Query: 83 GKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAY-SLAHPDKVTGL 141
G S + + D ++ L + + S G + + A P++
Sbjct: 65 GLSPSEV--PDFGYQEQVKDALEILDQLGVETFLPVSHSHGGWVLVELLEQAGPERAPRG 122
Query: 142 VLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQ 201
++ + F + P+ W + +
Sbjct: 123 IIMDWLMWA--PKPDFAKSLTLLKDPERWREGTHGLFD-------------------VWL 161
Query: 202 YAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNI 261
+ ++ E + D + + IE+ Y + + +
Sbjct: 162 DGHDEKRVRHHLL--------EEMADYGYDCWGRSGRVIEDAYG-------RNGSPMQMM 206
Query: 262 DNIRHINAT-IVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANE--PGIAAELVA 318
N+ + + D + P + + H P AA +
Sbjct: 207 ANLTKTRPIRHIFSQPTEPEYEKINSDFAEQHPWFSYAKLGGPTHFPAIDVPDRAAVHIR 266
Query: 319 T 319
Sbjct: 267 E 267
|
| >1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A Length = 276 | Back alignment and structure |
|---|
Score = 86.9 bits (216), Expect = 6e-20
Identities = 51/293 (17%), Positives = 85/293 (29%), Gaps = 48/293 (16%)
Query: 27 LKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDF-------YRIILFDQ 79
+ D I+++ G + F HG P + +D YR++ D+
Sbjct: 4 VTTKDGVQIFYKDWGPRDAPVIHFHHGWPL------SADDWDAQLLFFLAHGYRVVAHDR 57
Query: 80 RGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHP-DKV 138
RG G+S+ D + DD+ + HL I G S G + Y HP DKV
Sbjct: 58 RGHGRSSQVW--DGHDMDHYADDVAAVVAHLGIQGAVHVGHSTGGGEVVRYMARHPEDKV 115
Query: 139 TGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDK 198
VL + G +++ + R N
Sbjct: 116 AKAVLIAAVPPLMVQTPGNPGGLPKSVFDGFQAQVASNRAQFYRD-VPAGPFYGYNRPGV 174
Query: 199 ETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLL 258
E W + M+ + + D +AF++
Sbjct: 175 EASEGIIGNWWRQGMIGSA---------KAHYDGI-VAFSQ------------------T 206
Query: 259 DNIDNIRHINA--TIVQGRYDVCCPM-MSAWDLHKAWPEADFKVVADAGHSAN 308
D ++++ I ++ G D P S K P K H
Sbjct: 207 DFTEDLKGIQQPVLVMHGDDDQIVPYENSGVLSAKLLPNGALKTYKGYPHGMP 259
|
| >2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans} Length = 266 | Back alignment and structure |
|---|
Score = 86.5 bits (215), Expect = 7e-20
Identities = 44/285 (15%), Positives = 84/285 (29%), Gaps = 60/285 (21%)
Query: 34 TIYWEQSGNPTGH--PVVFLHGGPGGGTTPSNRRFFDP------DFYRIILFDQRGAGKS 85
+++ G G+ +V + ++ + P +R++ +D RG G S
Sbjct: 13 ELHYRIDGERHGNAPWIVLSNS------LGTDLSMWAPQVAALSKHFRVLRYDTRGHGHS 66
Query: 86 TPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRG 145
T L D+ L L+I G S G +A + H D++ + L
Sbjct: 67 EAPK--GPYTIEQLTGDVLGLMDTLKIARANFCGLSMGGLTGVALAARHADRIERVAL-- 122
Query: 146 IFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAA 205
+ A P+ W DA R + D +
Sbjct: 123 --------CN----TAARIGSPEVWVPRAVKARTEGMHALADAVLPRWFTADYMEREPVV 170
Query: 206 RAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIR 265
A + ++ + + ++ I+ D
Sbjct: 171 LAMIR-DVFVHT-----------DKEGYASNCEAIDAA---------------DLRPEAP 203
Query: 266 HINA--TIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSAN 308
I ++ G +D+ +L +A A + V DA H +N
Sbjct: 204 GIKVPALVISGTHDLAATPAQGRELAQAIAGARY-VELDASHISN 247
|
| >1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12 Length = 273 | Back alignment and structure |
|---|
Score = 85.9 bits (213), Expect = 2e-19
Identities = 51/286 (17%), Positives = 92/286 (32%), Gaps = 50/286 (17%)
Query: 34 TIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDF-------YRIILFDQRGAGKST 86
IY++ G +G P+VF HG P N ++ YR+I D+RG G+S+
Sbjct: 10 QIYYKDWG--SGQPIVFSHGWPL------NADSWESQMIFLAAQGYRVIAHDRRGHGRSS 61
Query: 87 PHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAH-PDKVTGLVLRG 145
N DD+ +L +HL++ + +FG S G Y H +V L
Sbjct: 62 QPW--SGNDMDTYADDLAQLIEHLDLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLIS 119
Query: 146 IFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAA 205
+ + G ++ ++ + + N ++
Sbjct: 120 AVPPLMLKTEANPGGLPMEVFDGIRQASLADRSQLYKD-LASGPFFGFNQPGAKSSAGMV 178
Query: 206 RAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIR 265
+ M H +N Y K F +D ++++
Sbjct: 179 DWFWLQGMAAGH-----------------------KNAYDCIKAFSETDFT-----EDLK 210
Query: 266 HIN--ATIVQGRYDVCCPM-MSAWDLHKAWPEADFKVVADAGHSAN 308
I+ +V G D P+ S + K+ + A H
Sbjct: 211 KIDVPTLVVHGDADQVVPIEASGIASAALVKGSTLKIYSGAPHGLT 256
|
| >1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A Length = 277 | Back alignment and structure |
|---|
Score = 85.4 bits (212), Expect = 2e-19
Identities = 55/300 (18%), Positives = 100/300 (33%), Gaps = 50/300 (16%)
Query: 21 PYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDF-------YR 73
P+ T + S +Y+E G TG PVV +HG P + ++ YR
Sbjct: 1 PFITVGQENSTSIDLYYEDHG--TGQPVVLIHGFPL------SGHSWERQSAALLDAGYR 52
Query: 74 IILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAY-SL 132
+I +D+RG G+S+ D+ + + L++ + + G S G+ Y S
Sbjct: 53 VITYDRRGFGQSS--QPTTGYDYDTFAADLNTVLETLDLQDAVLVGFSTGTGEVARYVSS 110
Query: 133 AHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKR 192
++ + + D +G A + ++ + + R F +
Sbjct: 111 YGTARIAKVAFLASLEPFLLKTDDNPDGAAPQ---EFFDGIVAAVKAD-RYAFYTGFFND 166
Query: 193 LNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFP 252
+ D+ + + TA A ++
Sbjct: 167 FYNLDENLGTRISEEAVRNSWNTA-------------------ASGGFFAAAAAPTTWYT 207
Query: 253 SDSFLLDNIDNIRHIN--ATIVQGRYDVCCPM-MSAWDLHKAWPEADFKVVADAGHSANE 309
D +I I+ A I+ G D P+ +A HKA P A++ V A H
Sbjct: 208 ------DFRADIPRIDVPALILHGTGDRTLPIENTARVFHKALPSAEYVEVEGAPHGLLW 261
|
| >1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A* Length = 271 | Back alignment and structure |
|---|
Score = 85.4 bits (212), Expect = 2e-19
Identities = 49/293 (16%), Positives = 104/293 (35%), Gaps = 60/293 (20%)
Query: 30 SDIHTIYWEQSGNPTGHP-VVFLHGGPGGGTTPSNRRFFDP------DFYRIILFDQRGA 82
S + + + G +G ++F G ++ ++ + +R+ILFD G+
Sbjct: 6 SILSRNHVKVKG--SGKASIMFAPG------FGCDQSVWNAVAPAFEEDHRVILFDYVGS 57
Query: 83 GKS-TPHACLDQNTTWD-LIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTG 140
G S L++ T D D+ + + L++ E G S G+ + + S+ P+ +
Sbjct: 58 GHSDLRAYDLNRYQTLDGYAQDVLDVCEALDLKETVFVGHSVGALIGMLASIRRPELFSH 117
Query: 141 LVL---RGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDD 197
LV+ +L E Y GG + +++ +N + LN D
Sbjct: 118 LVMVGPSPCYLNDPPE----YYGGFE---EEQLLGLLEMMEKNYIGWATVFAATVLNQPD 170
Query: 198 KETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFL 257
+ + + + D + + FA+ +F
Sbjct: 171 R----PEIKEELESRFCST-------------DPVIARQFAKA--------------AFF 199
Query: 258 LDNIDNIRHINA--TIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSAN 308
D+ +++ + I+Q D+ P +H+ P + K + GH +
Sbjct: 200 SDHREDLSKVTVPSLILQCADDIIAPATVGKYMHQHLPYSSLKQMEARGHCPH 252
|
| >3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans} Length = 292 | Back alignment and structure |
|---|
Score = 85.8 bits (212), Expect = 2e-19
Identities = 38/212 (17%), Positives = 72/212 (33%), Gaps = 13/212 (6%)
Query: 28 KVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFD--PDFYRIILFDQRGAGKS 85
+ I+T + E GNP VFL G T + D PD I+ D +G S
Sbjct: 29 LLGPIYTCHRE--GNPC---FVFLSGAGFFSTADNFANIIDKLPDSIGILTIDAPNSGYS 83
Query: 86 TPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRG 145
P + D ++ I + +H + + + S G AL G +
Sbjct: 84 -PVSNQANVGLRDWVNAILMIFEHFKFQSYLLCVHSIGGFAALQIMNQSSKACLGFIGLE 142
Query: 146 IFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAA 205
+ + G ++ +YP + L +R ++ S+ S + Q
Sbjct: 143 PTTVMI-----YRAGFSSDLYPQLALRRQKLKTAADRLNYLKDLSRSHFSSQQFKQLWRG 197
Query: 206 RAWTKWEMMTAHLLPNEENIKRGEDDIFSLAF 237
+ + ++ LP+ + ++ F
Sbjct: 198 YDYCQRQLNDVQSLPDFKIRLALGEEDFKTGI 229
|
| >1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26 Length = 258 | Back alignment and structure |
|---|
Score = 85.0 bits (211), Expect = 2e-19
Identities = 47/284 (16%), Positives = 91/284 (32%), Gaps = 55/284 (19%)
Query: 33 HTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDP------DFYRIILFDQRGAGKST 86
+ I+W+ G +V LHG N + + + L D G G+S
Sbjct: 2 NNIWWQTKGQG-NVHLVLLHGWGL------NAEVWRCIDEELSSHFTLHLVDLPGFGRSR 54
Query: 87 PHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGI 146
L + D+ + + + G S G +A +L HP++V LV
Sbjct: 55 GFGAL---SLADMAEAVL----QQAPDKAIWLGWSLGGLVASQIALTHPERVRALVTVAS 107
Query: 147 FLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAAR 206
+W I PD F+ + ++++ + + + Q A A
Sbjct: 108 SPCFSARDEW------PGIKPDVLAGFQQQLSDDQQRTVERFLALQTMGTETARQDARAL 161
Query: 207 AWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRH 266
+ + A +P + + G + + D +++
Sbjct: 162 ----KKTVLALPMPEVDVLNGGLE-----ILKTV------------------DLRQPLQN 194
Query: 267 INA-T-IVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSAN 308
++ + G D P L K WP ++ + A A H+
Sbjct: 195 VSMPFLRLYGYLDGLVPRKVVPMLDKLWPHSESYIFAKAAHAPF 238
|
| >4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa} Length = 315 | Back alignment and structure |
|---|
Score = 86.0 bits (213), Expect = 2e-19
Identities = 55/308 (17%), Positives = 87/308 (28%), Gaps = 26/308 (8%)
Query: 9 PELNTNLYPYVEPYSTGILKVSDIHTIYWEQ-SGNPTGHPVVFLHGGPGGGTT-PSNRRF 66
L Y Y Y + + Y + G ++ +HG T
Sbjct: 9 ERLEGFDYAYPVHYLDFTSQGQPLSMAYLDVAPKKANGRTILLMHGKNFCAGTWERTIDV 68
Query: 67 FDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTL 126
YR+I DQ G KS+ A + L + L + L + V G S G L
Sbjct: 69 LADAGYRVIAVDQVGFCKSSKPAHYQY-SFQQLAANTHALLERLGVARASVIGHSMGGML 127
Query: 127 ALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFV 186
A Y+L +P +V LVL L DW G D + E R
Sbjct: 128 ATRYALLYPRQVERLVLVNPIGLE----DWKALGVPWRSVDDWYRRDLQTSAEGIRQYQQ 183
Query: 187 DAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFL 246
Y + + + + + + R++
Sbjct: 184 ATYYAGEWRPEFDRWVQMQAGMYRGKGRESVAWNSALTYDMIFTQPVVYELDRLQM---- 239
Query: 247 NKGFFPSDSFLL-----DNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVA 301
P+ LL DN +A + + + D + P+A
Sbjct: 240 -----PT---LLLIGEKDNT--AIGKDAAPAELKARLGNYAQLGKDAARRIPQATLVEFP 289
Query: 302 DAGHSANE 309
D GH+
Sbjct: 290 DLGHTPQI 297
|
| >3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum} Length = 245 | Back alignment and structure |
|---|
Score = 84.7 bits (210), Expect = 2e-19
Identities = 38/287 (13%), Positives = 76/287 (26%), Gaps = 70/287 (24%)
Query: 33 HTIYWEQSGNP-TGHPVVFLHGGPGGGTTPSNRRFFDP--DF---YRIILFDQRGAGKST 86
+++ GN + + ++F+HG N + F + Y IL D +G G+S
Sbjct: 3 AMLHYVHVGNKKSPNTLLFVHGSGC------NLKIFGELEKYLEDYNCILLDLKGHGESK 56
Query: 87 PHACLD-QNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRG 145
++ + I + G S G + L +L V +V
Sbjct: 57 GQCPSTVYGYIDNVANFITNSEVTKHQKNITLIGYSMGGAIVLGVALKKLPNVRKVVSLS 116
Query: 146 ----IFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQ 201
L K ++ Y Y + I + + D +
Sbjct: 117 GGARFDKLDKDFMEKIYHNQLDNNY------LLECIGGIDN--PLSEKYFETLEKDPDIM 168
Query: 202 YAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNI 261
A + L+DN+
Sbjct: 169 INDLIACKLID--------------------------------------------LVDNL 184
Query: 262 DNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSAN 308
NI I + + ++ + + + K ++ K+ H
Sbjct: 185 KNID-IPVKAIVAKDELLTLVEYSEIIKKEVENSELKIFETGKHFLL 230
|
| >2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus} Length = 269 | Back alignment and structure |
|---|
Score = 84.3 bits (209), Expect = 4e-19
Identities = 51/285 (17%), Positives = 100/285 (35%), Gaps = 47/285 (16%)
Query: 33 HTIYWE--QSGNPTGHPVVFLHGGPGGGTTPSNRRFFDP------DFYRIILFDQRGAGK 84
H +++ ++ T +VFLHG + R + D Y +I D G G+
Sbjct: 2 HMTHYKFYEANVETNQVLVFLHGFLS------DSRTYHNHIEKFTDNYHVITIDLPGHGE 55
Query: 85 STPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLR 144
+ + ++++ + +FG S G +AL Y++ ++ L+L
Sbjct: 56 DQSSMD-ETWNFDYITTLLDRILDKYKDKSITLFGYSMGGRVALYYAINGHIPISNLIL- 113
Query: 145 GIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAA 204
E + I +A + R L+ DA +K L+ E
Sbjct: 114 --------------ESTSPGIKEEANQLERRLV--------DDARAKVLDIAGIE---LF 148
Query: 205 ARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYF-LNKGFFPSDSFLLDNIDN 263
W K + + L E + S + ++ G P+ L +
Sbjct: 149 VNDWEKLPLFQSQLELPVEIQHQIRQQRLSQSPHKMAKALRDYGTGQMPN---LWPRLKE 205
Query: 264 IRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSAN 308
I+ + I+ G YD + A + P + K+++ GH+ +
Sbjct: 206 IK-VPTLILAGEYDEKFVQI-AKKMANLIPNSKCKLISATGHTIH 248
|
| >3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} PDB: 1va4_A 3hi4_A 3hea_A Length = 271 | Back alignment and structure |
|---|
Score = 83.9 bits (208), Expect = 6e-19
Identities = 57/286 (19%), Positives = 97/286 (33%), Gaps = 52/286 (18%)
Query: 34 TIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDF-------YRIILFDQRGAGKST 86
IY++ G +G PV+F HG + ++ YR I FD+RG G+S
Sbjct: 10 QIYFKDWG--SGKPVLFSHGWLL------DADMWEYQMEYLSSRGYRTIAFDRRGFGRSD 61
Query: 87 PHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAY-SLAHPDKVTGLVLRG 145
N DDI +L +HL++ E + G S G Y + +V GLVL G
Sbjct: 62 QPW--TGNDYDTFADDIAQLIEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLG 119
Query: 146 IFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAA 205
+ + +G + D + F+ + ++ D + + +
Sbjct: 120 AVTPLFGQKPDYPQG----VPLDVFARFKTELLKDRAQFISDFNAPFYGINKGQVVSQGV 175
Query: 206 RAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIR 265
+ T + A L + + AFA D ++
Sbjct: 176 QTQTLQIALLASLKATVDCVT---------AFAE------------------TDFRPDMA 208
Query: 266 HIN--ATIVQGRYDVCCPM-MSAWDLHKAWPEADFKVVADAGHSAN 308
I+ ++ G D P + + A+ KV DA H
Sbjct: 209 KIDVPTLVIHGDGDQIVPFETTGKVAAELIKGAELKVYKDAPHGFA 254
|
| >3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11} Length = 268 | Back alignment and structure |
|---|
Score = 83.8 bits (208), Expect = 6e-19
Identities = 42/283 (14%), Positives = 89/283 (31%), Gaps = 54/283 (19%)
Query: 34 TIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDP------DFYRIILFDQRGAGKSTP 87
++ VV + G + ++ P Y+++ +DQRG G + P
Sbjct: 6 SLSPPPYA--DAPVVVLISG------LGGSGSYWLPQLAVLEQEYQVVCYDQRGTGNN-P 56
Query: 88 HACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIF 147
+ + + ++ + I + V G + G+ + + +L +P VT L+
Sbjct: 57 DTLAEDYSIAQMAAELHQALVAAGIEHYAVVGHALGALVGMQLALDYPASVTVLIS---- 112
Query: 148 LLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARA 207
++ + A ++ L+ +V+A L D A
Sbjct: 113 ------VNGWLRINAHT--RRCFQVRERLLYSGGAQAWVEAQPLFLYPADWMAARAPRLE 164
Query: 208 WTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHI 267
+ + N+ R ++ D + I
Sbjct: 165 AEDALALAHF--QGKNNLLR--------RLNALKRA---------------DFSHHADRI 199
Query: 268 NA-T-IVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSAN 308
I+ D+ P + +LH A P++ V+ GH+ N
Sbjct: 200 RCPVQIICASDDLLVPTACSSELHAALPDSQKMVMPYGGHACN 242
|
| >1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23 Length = 210 | Back alignment and structure |
|---|
Score = 81.5 bits (201), Expect = 2e-18
Identities = 23/154 (14%), Positives = 38/154 (24%), Gaps = 5/154 (3%)
Query: 32 IHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDP---DFYRIILFDQRGAGKSTPH 88
+ V+ LHG T N YR + D G G S
Sbjct: 19 LFFREALPGSGQARFSVLLLHGIRFSSETWQNLGTLHRLAQAGYRAVAIDLPGLGHSKEA 78
Query: 89 ACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFL 148
A + + LE+ V S +L + A ++ G V
Sbjct: 79 AAPAPIGELAPGSFLAAVVDALELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPIC 138
Query: 149 LRKKEIDWFYEGGAAAIYPDAWESFRDLIPENER 182
K + A+ + + +
Sbjct: 139 TDKINAANYASVKTPAL--IVYGDQDPMGQTSFE 170
|
| >2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A Length = 291 | Back alignment and structure |
|---|
Score = 82.0 bits (203), Expect = 4e-18
Identities = 49/273 (17%), Positives = 82/273 (30%), Gaps = 34/273 (12%)
Query: 36 YWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDF---YRIILFDQRGAGKSTPHACLD 92
Y E G VV LHGG G + +N + ++ DQ G G S A
Sbjct: 28 YHEA-GVGNDQTVVLLHGGGPGAASWTNFSRNIAVLARHFHVLAVDQPGYGHSDKRAEHG 86
Query: 93 QNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKK 152
Q + ++ L L + + G + G A+ ++L +P + LVL G L
Sbjct: 87 QFNRY-AAMALKGLFDQLGLGRVPLVGNALGGGTAVRFALDYPARAGRLVLMGPGGLSIN 145
Query: 153 EIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWE 212
G + + R+ + R D + + + ++A A
Sbjct: 146 LFAPDPTEGVKRLSKFSVAPTRENLEAFLRVMVYDK--NLITPELVDQRFALASTPESLT 203
Query: 213 MMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIV 272
A + + + + +R ++
Sbjct: 204 -----------------------ATRAMGKSFAGADFEAGM---MWREVYRLRQ-PVLLI 236
Query: 273 QGRYDVCCPMMSAWDLHKAWPEADFKVVADAGH 305
GR D P+ A K P A V GH
Sbjct: 237 WGREDRVNPLDGALVALKTIPRAQLHVFGQCGH 269
|
| >3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} Length = 266 | Back alignment and structure |
|---|
Score = 81.1 bits (201), Expect = 5e-18
Identities = 40/285 (14%), Positives = 78/285 (27%), Gaps = 61/285 (21%)
Query: 34 TIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDP------DFYRIILFDQRGAGKSTP 87
++ + G + + + +D +R++ +D RG G S+
Sbjct: 16 SLAYRLDGAAEKPLLALSNS------IGTTLHMWDAQLPALTRHFRVLRYDARGHGASSV 69
Query: 88 HACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIF 147
T L +D+ +L LE+ G S G + +L P ++ LVL
Sbjct: 70 PP--GPYTLARLGEDVLELLDALEVRRAHFLGLSLGGIVGQWLALHAPQRIERLVL---- 123
Query: 148 LLRKKEIDWFYEGGAAAIYPDAW-ESFRDLIPENERSCFVDAYSKRLNSDD-KETQYAAA 205
+ A W E ++ + S + E
Sbjct: 124 ------AN----TSAWLGPAAQWDERIAAVLQAEDMSETAAGFLGNWFPPALLERAEPVV 173
Query: 206 RAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIR 265
+ M+ A + +FA + + D +
Sbjct: 174 ERF--RAMLMAT-----------NRHGLAGSFAAVRDT---------------DLRAQLA 205
Query: 266 HINA--TIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSAN 308
I ++ G YD + + A + A H +N
Sbjct: 206 RIERPTLVIAGAYDTVTAASHGELIAASIAGARLVTL-PAVHLSN 249
|
| >2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis} Length = 306 | Back alignment and structure |
|---|
Score = 81.6 bits (202), Expect = 7e-18
Identities = 41/297 (13%), Positives = 87/297 (29%), Gaps = 60/297 (20%)
Query: 21 PYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDP------DFYRI 74
+ + + SG P+V LHG T + P YR
Sbjct: 44 RCKSFYISTRFG-QTHVIASGPEDAPPLVLLHGALFSSTM------WYPNIADWSSKYRT 96
Query: 75 ILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAH 134
D G + + T D + + + +L I + + G S G + + L
Sbjct: 97 YAVDIIGDKNKSIPENVSG-TRTDYANWLLDVFDNLGIEKSHMIGLSLGGLHTMNFLLRM 155
Query: 135 PDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLN 194
P++V + A P + ++ +
Sbjct: 156 PERVKSAAI---------------LSPAETFLPFHHDFYKYALGLTAS------------ 188
Query: 195 SDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSD 254
+ W MM + + +K+ + + +R + N FP
Sbjct: 189 --------NGVETFLNW-MMNDQNVLHPIFVKQFKAGVMWQDGSR---NPNPNADGFPY- 235
Query: 255 SFLLDNIDNIRHINA--TIVQGRYD-VCCPMMSAWDLHKAWPEADFKVVADAGHSAN 308
+ + +R ++ G ++ + P + P+ + +V+ +AGH +
Sbjct: 236 ---VFTDEELRSARVPILLLLGEHEVIYDPHSALHRASSFVPDIEAEVIKNAGHVLS 289
|
| >3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica} Length = 282 | Back alignment and structure |
|---|
Score = 80.0 bits (198), Expect = 2e-17
Identities = 35/274 (12%), Positives = 86/274 (31%), Gaps = 49/274 (17%)
Query: 44 TGHPVVFLHGGPGGGTTPSNRRFFDP------DFYRIILFDQRGAGKSTPHAC--LDQNT 95
V+ HG ++ + + +I+FD G+G+S + ++
Sbjct: 27 GEKTVLLAHGFGC------DQNMWRFMLPELEKQFTVIVFDYVGSGQSDLESFSTKRYSS 80
Query: 96 TWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEID 155
D+E++ L++ + G S S +A S D+++ + + I
Sbjct: 81 LEGYAKDVEEILVALDLVNVSIIGHSVSSIIAGIASTHVGDRISDITM----------I- 129
Query: 156 WFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMT 215
+ + + + ++ ++ ++ + W + +
Sbjct: 130 -----CPSPCFMNFPPDYVGGFERDD----LEELINLMDKN--------YIGWANY--LA 170
Query: 216 AHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSF-LLDNIDNIRHINATIVQG 274
++ + + + S K F SD LL++I A I Q
Sbjct: 171 PLVMGASHSSELIGELSGSFCTTDPIVAKTFAKATFFSDYRSLLEDIS----TPALIFQS 226
Query: 275 RYDVCCPMMSAWDLHKAWPEADFKVVADAGHSAN 308
D + + P + +++ GH +
Sbjct: 227 AKDSLASPEVGQYMAENIPNSQLELIQAEGHCLH 260
|
| >1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10 Length = 296 | Back alignment and structure |
|---|
Score = 79.3 bits (196), Expect = 4e-17
Identities = 55/312 (17%), Positives = 98/312 (31%), Gaps = 58/312 (18%)
Query: 1 MMESGKELPELNTNLYPYVEPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTT 60
M+ +++ E + Y + + T Y E G G PV+ +HGG G +
Sbjct: 1 MLNKAEQISEKSER------AYVERFVNAGGVETRYLEA-G--KGQPVILIHGGGAGAES 51
Query: 61 PSNRRFFDPDF---YRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQV 117
N R P YR+I D G GK+ I + + +
Sbjct: 52 EGNWRNVIPILARHYRVIAMDMLGFGKTAKPDIEYTQDRR--IRHLHDFIKAMNFDGKVS 109
Query: 118 FGG-SWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDL 176
G S G L S+ H + V LVL G+A + + E R +
Sbjct: 110 IVGNSMGGATGLGVSVLHSELVNALVLM----------------GSAGLVVEIHEDLRPI 153
Query: 177 IPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLA 236
I + K + ++ I + ++ A
Sbjct: 154 INY-------------------DFTREGMVHLVKA-LTNDGFKIDDAMI----NSRYTYA 189
Query: 237 FARIENHYFLNKGFFPSDSFLLDNI-DNIRHINA-T-IVQGRYDVCCPMMSAWDLHKAWP 293
++ + + L + IR + T +VQG+ D P+ +A+
Sbjct: 190 TDEATRKAYVATMQWIREQGGLFYDPEFIRKVQVPTLVVQGKDDKVVPVETAYKFLDLID 249
Query: 294 EADFKVVADAGH 305
++ ++ GH
Sbjct: 250 DSWGYIIPHCGH 261
|
| >3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans} Length = 285 | Back alignment and structure |
|---|
Score = 77.8 bits (192), Expect = 1e-16
Identities = 39/276 (14%), Positives = 78/276 (28%), Gaps = 36/276 (13%)
Query: 36 YWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDP------DFYRIILFDQRGAGKSTPHA 89
+ G+ + PV+ L G N R F+ +R++ + RG G S
Sbjct: 20 FRAYEGDISRPPVLCLPGLTR------NARDFEDLATRLAGDWRVLCPEMRGRGDSDYAK 73
Query: 90 CLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLL 149
+ D+E L I + G S G L + + A+P ++ VL +
Sbjct: 74 DPMTYQPMQYLQDLEALLAQEGIERFVAIGTSLGGLLTMLLAAANPARIAAAVLNDV--- 130
Query: 150 RKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWT 209
+ P+ E R + + ++ L + T
Sbjct: 131 ------------GPEVSPEGLERIRGYVGQGRNFETWMHAARALQESSGD--VYPDWDIT 176
Query: 210 KWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINA 269
+W ++ G + + F + D +
Sbjct: 177 QWLRYAKRIM------VLGSSGRIAFDYDMKIAEPFEAPVGATPQVDMWPLFDALATRPL 230
Query: 270 TIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGH 305
+++G +A + P + + GH
Sbjct: 231 LVLRGETSDILSAQTA-AKMASRPGVELVTLPRIGH 265
|
| >3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti} Length = 314 | Back alignment and structure |
|---|
Score = 77.8 bits (192), Expect = 2e-16
Identities = 55/301 (18%), Positives = 91/301 (30%), Gaps = 53/301 (17%)
Query: 17 PYVEPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDP------D 70
+ + + + + I T+ + G +G ++F HG N F+P D
Sbjct: 43 IASDHFISRRVDIGRI-TLNVREKG--SGPLMLFFHGITS------NSAVFEPLMIRLSD 93
Query: 71 FYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAY 130
+ I DQRG G S D DDI L + L + G S G+ ++
Sbjct: 94 RFTTIAVDQRGHGLSDKPE--TGYEANDYADDIAGLIRTLARGHAILVGHSLGARNSVTA 151
Query: 131 SLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYS 190
+ +PD V +V + E E A + I E ++
Sbjct: 152 AAKYPDLVRSVVAIDFTPYIETEALDALEARVN-----AGSQLFEDIKAVEA--YLAGRY 204
Query: 191 KRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGF 250
+ +D RA + ++ + L P AR
Sbjct: 205 PNIPADA-----IRIRAESGYQPVDGGLRP-------LASSAAMAQTAR----------- 241
Query: 251 FPSDSFLLDNIDNIRHINA--TIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSAN 308
D + R + IV+G + + P+ VV A H N
Sbjct: 242 ----GLRSDLVPAYRDVTKPVLIVRGESSKLVSAAALAKTSRLRPDLPVVVVPGADHYVN 297
Query: 309 E 309
E
Sbjct: 298 E 298
|
| >3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida} Length = 264 | Back alignment and structure |
|---|
Score = 74.8 bits (184), Expect = 1e-15
Identities = 41/297 (13%), Positives = 84/297 (28%), Gaps = 56/297 (18%)
Query: 33 HTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDP------DFYRIILFDQRGAGKS- 85
+ + +SG+P + L G + R F + +I D RG
Sbjct: 9 TLMTYSESGDPHAPTLFLLSGW------CQDHRLFKNLAPLLARDFHVICPDWRGHDAKQ 62
Query: 86 TPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLA-HPDKVTGLVLR 144
T D + L D+ I ++Q+ S G + + ++ ++
Sbjct: 63 TDSGDFD---SQTLAQDLLAFIDAKGIRDFQMVSTSHGCWVNIDVCEQLGAARLPKTIII 119
Query: 145 GIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAA 204
L + F++ A +P + + R F D +++ ++ D
Sbjct: 120 DWLL---QPHPGFWQQLAEGQHPTEYVAGRQS--------FFDEWAETTDNADVLNHLRN 168
Query: 205 ARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNI 264
W EM + A IE +Y + S +D++
Sbjct: 169 EMPWFHGEM-------------------WQRACREIEANY----RTWGSPLDRMDSLPQK 205
Query: 265 RHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANE--PG-IAAELVA 318
I Q + + + + H + P +A +
Sbjct: 206 PEICHIYSQPLSQDYRQLQLEFA--AGHSWFHPRHIPGRTHFPSLENPVAVAQAIRE 260
|
| >3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728} Length = 207 | Back alignment and structure |
|---|
Score = 68.7 bits (168), Expect = 6e-14
Identities = 20/136 (14%), Positives = 41/136 (30%), Gaps = 5/136 (3%)
Query: 29 VSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDP---DFYRIILFDQRGAGKS 85
V+ + + + HG F+ Y + D G G+S
Sbjct: 11 VNGTRVFQRKMVTDSNRRSIALFHGYSFTSMDWDKADLFNNYSKIGYNVYAPDYPGFGRS 70
Query: 86 T--PHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVL 143
+D+ + I + + + G S G + + +L +PD V G++
Sbjct: 71 ASSEKYGIDRGDLKHAAEFIRDYLKANGVARSVIMGASMGGGMVIMTTLQYPDIVDGIIA 130
Query: 144 RGIFLLRKKEIDWFYE 159
+ + D
Sbjct: 131 VAPAWVESLKGDMKKI 146
|
| >3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L} Length = 286 | Back alignment and structure |
|---|
Score = 68.9 bits (169), Expect = 1e-13
Identities = 36/254 (14%), Positives = 71/254 (27%), Gaps = 45/254 (17%)
Query: 20 EPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDP-------DFY 72
L+ G+P V+ +HG + Y
Sbjct: 2 NAMEEKFLEFGGNQICLCSW-GSPEHPVVLCIHGILE------QGLAWQEVALPLAAQGY 54
Query: 73 RIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSL 132
R++ D G G+S+ + ++ + I+++ Q L + G S G+ LA A +
Sbjct: 55 RVVAPDLFGHGRSSHLEMVTSYSSLTFLAQIDRVIQELPDQPLLLVGHSMGAMLATAIAS 114
Query: 133 AHPDKVTGLVL------------RGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPEN 180
P K+ L+L +D+ I+PD + L
Sbjct: 115 VRPKKIKELILVELPLPAEESKKESAVNQLTTCLDYLSSTPQHPIFPDVATAASRLRQAI 174
Query: 181 ------------ERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIK-- 226
+R + R + D + + L ++I+
Sbjct: 175 PSLSEEFSYILAQRITQPNQGGVRWSWDAIIRTRSILG-LNNLPGGRSQYLEMLKSIQVP 233
Query: 227 ----RGEDDIFSLA 236
G+ +
Sbjct: 234 TTLVYGDSSKLNRP 247
|
| >2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A* Length = 398 | Back alignment and structure |
|---|
Score = 69.0 bits (168), Expect = 3e-13
Identities = 44/291 (15%), Positives = 75/291 (25%), Gaps = 33/291 (11%)
Query: 37 WEQSGNPTGHPVVFLH--GGPGGGTTPSNRRFFD------PDFYRIILFDQRGAGKSTPH 88
+S T +VFLH G R +++L DQ G S
Sbjct: 44 QRRSRTATRLNLVFLHGSGMSKVVWEYYLPRLVAADAEGNYAIDKVLLIDQVNHGDSAVR 103
Query: 89 AC--LDQNTTW-----DLIDDIEKLRQHLEIPEWQVF--GGSWGSTLALAYSLAHPDKVT 139
L N W D++ ++ G S G ALA + P+
Sbjct: 104 NRGRLGTNFNWIDGARDVLKIATCELGSIDSHPALNVVIGHSMGGFQALACDVLQPNLFH 163
Query: 140 GLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKE 199
L+ L+ I G P + + + R D ++ +
Sbjct: 164 LLI-----LIEPVVITRKAIGAGRPGLPPDSPQIPENLYNSLRLKTCDHFANE---SEYV 215
Query: 200 TQYAAARAWTKW-----EMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSD 254
+T + + + + +N
Sbjct: 216 KYMRNGSFFTNAHSQILQNIIDFERTKASGDDEDGGPV-RTKMEQAQN-LLCYMNMQTFA 273
Query: 255 SFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGH 305
FL+ N+ +R + G CP + L K V+ H
Sbjct: 274 PFLISNVKFVR-KRTIHIVGARSNWCPPQNQLFLQKTLQNYHLDVIPGGSH 323
|
| >3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 1cqw_A 2v9z_A Length = 299 | Back alignment and structure |
|---|
Score = 67.7 bits (166), Expect = 4e-13
Identities = 50/300 (16%), Positives = 85/300 (28%), Gaps = 51/300 (17%)
Query: 21 PYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSN----RRFFDP--DFYRI 74
P+ ++V Y + G G PV+FLHG P++ R +R
Sbjct: 9 PFDPHYVEVLGERMHYVDV-GPRDGTPVLFLHG------NPTSSYLWRNIIPHVAPSHRC 61
Query: 75 ILFDQRGAGKS-TPHACLDQN-TTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSL 132
I D G GKS P D + D + ++ + L + E + WGS L ++
Sbjct: 62 IAPDLIGMGKSDKP----DLDYFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAK 117
Query: 133 AHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKR 192
+P++V G+ W+ + + E ++ +
Sbjct: 118 RNPERVKGIAC-----------------MEFIRPFPTWDEWPEFARETFQAFRTADVGRE 160
Query: 193 LNSDDKETQYAAARAWTK----WEMMTAHLLPNEENIKRGEDDIFSLAFAR---IENHYF 245
L D A M + P + D F I
Sbjct: 161 LIIDQNAFIEGALPKCVVRPLTEVEMDHYREP----FLKPVDREPLWRFPNELPIAGEPA 216
Query: 246 LNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGH 305
+ L + + G V P A L ++ P + H
Sbjct: 217 NIVALVEAYMNWLHQSP----VPKLLFWGTPGVLIPPAEAARLAESLPNCKTVDIGPGLH 272
|
| >2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A Length = 286 | Back alignment and structure |
|---|
Score = 66.7 bits (162), Expect = 9e-13
Identities = 36/199 (18%), Positives = 54/199 (27%), Gaps = 14/199 (7%)
Query: 40 SGNPTGHPVVFLHGGPGGGTTPSNRRFFDPD------FYRIILFDQRGAGKSTPHACLDQ 93
+ P + H + F D + + D G + P L
Sbjct: 30 TPKPKRPAIFTYHDVGLNYKSCFQPLFRFGDMQEIIQNFVRVHVDAPGMEEGAPVFPLGY 89
Query: 94 N--TTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRK 151
+ L D I + Q+L G G+ + Y+L HPD V GLVL I K
Sbjct: 90 QYPSLDQLADMIPCILQYLNFSTIIGVGVGAGAYILSRYALNHPDTVEGLVLINIDPNAK 149
Query: 152 KEIDWFY---EGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAW 208
+DW G ++I L + E S + K +
Sbjct: 150 GWMDWAAHKLTGLTSSIPDMILGH---LFSQEELSGNSELIQKYRGIIQHAPNLENIELY 206
Query: 209 TKWEMMTAHLLPNEENIKR 227
L
Sbjct: 207 WNSYNNRRDLNFERGGETT 225
|
| >3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A Length = 255 | Back alignment and structure |
|---|
Score = 65.9 bits (161), Expect = 1e-12
Identities = 26/117 (22%), Positives = 38/117 (32%), Gaps = 9/117 (7%)
Query: 33 HTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDF---YRIILFDQRGAGKSTPHA 89
+ P+V +HG G N D + II D R G S P
Sbjct: 4 NIRAQTAQNQHNNSPIVLVHGLFGSL---DNLGVLARDLVNDHNIIQVDVRNHGLS-PRE 59
Query: 90 CLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGI 146
+ D+ L+I + G S G +A + PD++ LV I
Sbjct: 60 --PVMNYPAMAQDLVDTLDALQIDKATFIGHSMGGKAVMALTALAPDRIDKLVAIDI 114
|
| >3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified} Length = 309 | Back alignment and structure |
|---|
Score = 64.3 bits (157), Expect = 6e-12
Identities = 45/300 (15%), Positives = 87/300 (29%), Gaps = 47/300 (15%)
Query: 21 PYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSN----RRF---FDPDFYR 73
P++ ++V Y ++ +G PV+FLHG P++ R YR
Sbjct: 8 PFAKRTVEVEGATIAYVDEG---SGQPVLFLHG------NPTSSYLWRNIIPYVVAAGYR 58
Query: 74 IILFDQRGAGKST-PHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSL 132
+ D G G S P + D + ++ L + + + WGS + + ++
Sbjct: 59 AVAPDLIGMGDSAKPD---IEYRLQDHVAYMDGFIDALGLDDMVLVIHDWGSVIGMRHAR 115
Query: 133 AHPDKVTGLVL-------RGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCF 185
+PD+V + + D E +
Sbjct: 116 LNPDRVAAVAFMEALVPPALPMPSYEAMGPQLGPLFRDLRTADVGEKMVLDGNFFVETIL 175
Query: 186 VDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYF 245
+ R S+ + Y A + + L + G + F+ A ++N +
Sbjct: 176 PEMGVVRSLSEAEMAAYRA--PFPTRQSRLP-TLQWPREVPIGGEPAFAEAE-VLKNGEW 231
Query: 246 LNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGH 305
L P + P L + P + + V H
Sbjct: 232 LMASPIP----------------KLLFHAEPGALAPKPVVDYLSENVPNLEVRFVGAGTH 275
|
| >2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A Length = 297 | Back alignment and structure |
|---|
Score = 62.8 bits (153), Expect = 2e-11
Identities = 53/301 (17%), Positives = 92/301 (30%), Gaps = 43/301 (14%)
Query: 15 LYPYVEPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSN--RRFFDP--D 70
+ PY +P L+++ Y ++ G +VF HG P T S R
Sbjct: 4 VEPYGQPKY---LEIAGKRMAYIDEG---KGDAIVFQHGNP----TSSYLWRNIMPHLEG 53
Query: 71 FYRIILFDQRGAGKST--PHACLDQNTTWDLIDDIEKLRQHLEIPE-WQVFGGSWGSTLA 127
R++ D G G S + D+ + + D + L L++ + + WGS L
Sbjct: 54 LGRLVACDLIGMGASDKLSPSGPDRYSYGEQRDFLFALWDALDLGDHVVLVLHDWGSALG 113
Query: 128 LAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVD 187
++ H D+V G+ + DW ++ FR E
Sbjct: 114 FDWANQHRDRVQGIAFMEAIVTPMTWADWP------PAVRGVFQGFRSPQGE-------- 159
Query: 188 AYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFAR---IENHY 244
+ N + A E M + P GED +L++ R I+
Sbjct: 160 PMALEHNIFVERVLPGAILRQLSDEEMNHYRRPFV---NGGEDRRPTLSWPRNLPIDGEP 216
Query: 245 FLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAG 304
L+ D + + D ++WP +
Sbjct: 217 AEVVALVNEYRSWLEETD----MPKLFINAEPGAIITGRIR-DYVRSWPNQTE-ITVPGV 270
Query: 305 H 305
H
Sbjct: 271 H 271
|
| >1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A Length = 310 | Back alignment and structure |
|---|
Score = 62.9 bits (153), Expect = 2e-11
Identities = 40/202 (19%), Positives = 68/202 (33%), Gaps = 14/202 (6%)
Query: 12 NTNLYPYVEPYSTGILKVSDIHTIYWEQSGNPTGHPVV-FLHGGPGGGTTPS--NRRFFD 68
N + YP+ Y + + Y ++ GN V LHG P T S R+
Sbjct: 14 NLDQYPFSPNYLDDLPGYPGLRAHYLDE-GNSDAEDVFLCLHGEP----TWSYLYRKMIP 68
Query: 69 P---DFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGST 125
R+I D G GKS + T + + L + L++ + WG
Sbjct: 69 VFAESGARVIAPDFFGFGKSDKPVDEEDYTFEFHRNFLLALIERLDLRNITLVVQDWGGF 128
Query: 126 LALAYSLAHPDKVTGLVL--RGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERS 183
L L +A P + L++ + + + A AW+ +
Sbjct: 129 LGLTLPMADPSRFKRLIIMNAXLMTDPVTQPAFSAFVTQPADGFTAWKYDLVTPSDLRLD 188
Query: 184 CFVDAYSKRLNSDDKETQYAAA 205
F+ ++ L + YAA
Sbjct: 189 QFMKRWAPTLTEAEASA-YAAP 209
|
| >3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A* Length = 316 | Back alignment and structure |
|---|
Score = 62.0 bits (151), Expect = 4e-11
Identities = 45/287 (15%), Positives = 73/287 (25%), Gaps = 51/287 (17%)
Query: 40 SGNPTGHPVVFLHGGPGGGTTPSN----RRFFDP--DFYRIILFDQRGAGKS-TPHACLD 92
+G V+FLHG P++ R I D G G+S P
Sbjct: 24 TGAQDAPVVLFLHG------NPTSSHIWRNILPLVSPVAHCIAPDLIGFGQSGKPD---I 74
Query: 93 QNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLV-----LRGIF 147
+D + ++ + + + WG+ LA + PD V GL
Sbjct: 75 AYRFFDHVRYLDAFIEQRGVTSAYLVAQDWGTALAFHLAARRPDFVRGLAFMEFIRPMPT 134
Query: 148 LLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARA 207
+ E A + FR +A+ +R+ R
Sbjct: 135 WQDFHHTEVAEEQDHAEAARAVFRKFRTPGEGEAMILEANAFVERV------LPGGIVRK 188
Query: 208 WTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHI 267
E M + P E LAF R P D + ++
Sbjct: 189 LGD-EEMAPYRTP----FPTPESRRPVLAFPRE----------LPIAGEPADVYEALQSA 233
Query: 268 NAT---------IVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGH 305
+A + G A + + H
Sbjct: 234 HAALAASSYPKLLFTGEPGALVSPEFAERFAASLTRCALIRLGAGLH 280
|
| >2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica} Length = 297 | Back alignment and structure |
|---|
Score = 60.9 bits (148), Expect = 7e-11
Identities = 26/131 (19%), Positives = 43/131 (32%), Gaps = 5/131 (3%)
Query: 16 YPYVEPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRF---FDPDFY 72
+PY Y G+ + Y ++ H + LHG P R+ F
Sbjct: 17 FPYAPHYLEGLPGFEGLRMHYVDEGPRDAEHTFLCLHGEPSWSF--LYRKMLPVFTAAGG 74
Query: 73 RIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSL 132
R++ D G G+S T + L++ + WG L L +
Sbjct: 75 RVVAPDLFGFGRSDKPTDDAVYTFGFHRRSLLAFLDALQLERVTLVCQDWGGILGLTLPV 134
Query: 133 AHPDKVTGLVL 143
P V L++
Sbjct: 135 DRPQLVDRLIV 145
|
| >2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A Length = 318 | Back alignment and structure |
|---|
Score = 61.3 bits (149), Expect = 7e-11
Identities = 31/134 (23%), Positives = 47/134 (35%), Gaps = 15/134 (11%)
Query: 16 YPYVEPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSN--RRFFDP--DF 71
+ + V D Y++ S + V+FLHG T S R
Sbjct: 17 PQWWARCKQ--MNVLDSFINYYD-SEKHAENAVIFLHGNA----TSSYLWRHVVPHIEPV 69
Query: 72 YRIILFDQRGAGKS-TPHACLDQNTTWDLIDDIEKLRQHLEIPE-WQVFGGSWGSTLALA 129
R I+ D G GKS D + + L +P+ G WG+ LA
Sbjct: 70 ARCIIPDLIGMGKSGKSGN--GSYRLLDHYKYLTAWFELLNLPKKIIFVGHDWGAALAFH 127
Query: 130 YSLAHPDKVTGLVL 143
Y+ H D++ +V
Sbjct: 128 YAYEHQDRIKAIVH 141
|
| >3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P Length = 316 | Back alignment and structure |
|---|
Score = 60.6 bits (147), Expect = 1e-10
Identities = 18/124 (14%), Positives = 43/124 (34%), Gaps = 9/124 (7%)
Query: 27 LKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTT--PSNRRFFDPDFYRIILFDQRGAGK 84
++ + G ++ LHGG + RI+ D R G+
Sbjct: 20 VENETGKDTFRVYKSGSEGPVLLLLHGGGHSALSWAVFTAAIISRVQCRIVALDLRSHGE 79
Query: 85 STPHACLDQN-TTWDLIDDIEKLRQHL---EIPEWQVFGGSWGSTLALAYSLAH-PDKVT 139
+ ++ + + D+ + + + P + G S G +A+ + ++ +
Sbjct: 80 TKVKN--PEDLSAETMAKDVGNVVEAMYGDLPPPIMLIGHSMGGAIAVHTASSNLVPSLL 137
Query: 140 GLVL 143
GL +
Sbjct: 138 GLCM 141
|
| >1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A Length = 302 | Back alignment and structure |
|---|
Score = 59.4 bits (144), Expect = 3e-10
Identities = 49/311 (15%), Positives = 92/311 (29%), Gaps = 55/311 (17%)
Query: 11 LNTNLYPYVEPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSN--RRFFD 68
++ P+ E +++ Y ++ TG P++F HG P T S R
Sbjct: 1 MSLGAKPFGEKK---FIEIKGRRMAYIDEG---TGDPILFQHGNP----TSSYLWRNIMP 50
Query: 69 P--DFYRIILFDQRGAGKST--PHACLDQNTTWDLIDDIEKLRQHLEIPE-WQVFGGSWG 123
R+I D G G S + ++ + D ++ L + L++ + + WG
Sbjct: 51 HCAGLGRLIACDLIGMGDSDKLDPSGPERYAYAEHRDYLDALWEALDLGDRVVLVVHDWG 110
Query: 124 STLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERS 183
S L ++ H ++V G+ + + D+ D +++FR E
Sbjct: 111 SALGFDWARRHRERVQGIAYMEAIAMPIEWADFP------EQDRDLFQAFRSQAGEELVL 164
Query: 184 CFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENH 243
+ L M A+ P + GE +L++ R
Sbjct: 165 QDNVFVEQVLP--------GLILRPLSEAEMAAYREP---FLAAGEARRPTLSWPRQ--- 210
Query: 244 YFLNKGFFPSDSFLLDNIDNIRHINA---------TIVQGRYDVCCPMMSAWDLHKAWPE 294
P D + R + D + WP
Sbjct: 211 -------IPIAGTPADVVAIARDYAGWLSESPIPKLFINAEPGA-LTTGRMRDFCRTWPN 262
Query: 295 ADFKVVADAGH 305
+ H
Sbjct: 263 QTE-ITVAGAH 272
|
| >2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A* Length = 356 | Back alignment and structure |
|---|
Score = 57.7 bits (139), Expect = 1e-09
Identities = 28/117 (23%), Positives = 46/117 (39%), Gaps = 29/117 (24%)
Query: 41 GNPTGHPVVFLHGGPGGGTTPSNRRFFDPDF---------------YRIILFDQRGAGKS 85
+ G VV LHG F P+ YR++ DQRG G+S
Sbjct: 23 PDQQGPLVVLLHG-------------F-PESWYSWRHQIPALAGAGYRVVAIDQRGYGRS 68
Query: 86 TPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLV 142
+ + +L+ D+ + + V G WG+ +A ++ HPD+ G+V
Sbjct: 69 SKYRVQKAYRIKELVGDVVGVLDSYGAEQAFVVGHDWGAPVAWTFAWLHPDRCAGVV 125
|
| >3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A* Length = 303 | Back alignment and structure |
|---|
Score = 53.1 bits (128), Expect = 3e-08
Identities = 26/121 (21%), Positives = 41/121 (33%), Gaps = 15/121 (12%)
Query: 32 IHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNR-----RFFDPDFYRIILFDQRGAGKST 86
+ YW +G P + HG G S R R + D G G+S
Sbjct: 30 LFCRYWAPTGTPKAL-IFVSHGA--GEH--SGRYEELARMLMGLDLLVFAHDHVGHGQSE 84
Query: 87 PHACLDQNTTWDLIDDIEKLRQHL--EIPEWQVF--GGSWGSTLALAYSLAHPDKVTGLV 142
+ + D+ + + + P VF G S G +A+ + P G+V
Sbjct: 85 GERM-VVSDFHVFVRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERPGHFAGMV 143
Query: 143 L 143
L
Sbjct: 144 L 144
|
| >3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A Length = 251 | Back alignment and structure |
|---|
Score = 53.0 bits (127), Expect = 3e-08
Identities = 25/113 (22%), Positives = 35/113 (30%), Gaps = 9/113 (7%)
Query: 36 YWEQSGNPTGHPVVFLHGGPGGGTTPSNR---RFFDPDFYRIILFDQRGAGKSTPHACLD 92
+E G TG VV LH G+ R Y + + G G P L
Sbjct: 15 PFEYEGTDTG--VVLLHAY--TGSPNDMNFMARALQRSGYGVYVPLFSGHGTVEPLDILT 70
Query: 93 QNTTWDLIDDIEKLRQHL--EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVL 143
+ + H+ + + VFG S G A+ P G V
Sbjct: 71 KGNPDIWWAESSAAVAHMTAKYAKVFVFGLSLGGIFAMKALETLPGITAGGVF 123
|
| >1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35 Length = 264 | Back alignment and structure |
|---|
Score = 52.7 bits (127), Expect = 3e-08
Identities = 21/114 (18%), Positives = 35/114 (30%), Gaps = 9/114 (7%)
Query: 33 HTIYWEQSGNPTGHPVVFLHGGPGGGTT--PSNRRFFDPDFYRIILFDQRGAGKSTPHAC 90
+ +++ + VV +HG G G P + D G G + P
Sbjct: 5 NQLHFAKPT-ARTPLVVLVHGLLGSGADWQPVLSHLARTQ-CAALTLDLPGHGTN-PER- 60
Query: 91 LDQNTTWDLIDDIEKLRQHLEIPEWQVF--GGSWGSTLALAYSLAHPDKVTGLV 142
+ + ++ IE+ Q E V G S G L + L
Sbjct: 61 -HCDNFAEAVEMIEQTVQAHVTSEVPVILVGYSLGGRLIMHGLAQGAFSRLNLR 113
|
| >3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens} Length = 342 | Back alignment and structure |
|---|
Score = 53.1 bits (128), Expect = 4e-08
Identities = 26/121 (21%), Positives = 42/121 (34%), Gaps = 15/121 (12%)
Query: 32 IHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNR-----RFFDPDFYRIILFDQRGAGKST 86
+ YW+ +G P + HG G S R R + D G G+S
Sbjct: 48 LFCRYWKPTGTPKAL-IFVSHGA--GEH--SGRYEELARMLMGLDLLVFAHDHVGHGQSE 102
Query: 87 PHACLDQNTTWDLIDDIEKLRQHL--EIPEWQVF--GGSWGSTLALAYSLAHPDKVTGLV 142
+ + D+ + + + P VF G S G +A+ + P G+V
Sbjct: 103 GERM-VVSDFHVFVRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERPGHFAGMV 161
Query: 143 L 143
L
Sbjct: 162 L 162
|
| >2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A* Length = 328 | Back alignment and structure |
|---|
Score = 52.4 bits (126), Expect = 5e-08
Identities = 40/217 (18%), Positives = 64/217 (29%), Gaps = 83/217 (38%)
Query: 44 TGHPVVFLHGGPGGGTTPSNRRFFDPDF---------------YRIILFDQRGAGKSTPH 88
G ++F+HG F P+ YR + D RG G +T
Sbjct: 30 EGPTILFIHG-------------F-PELWYSWRHQMVYLAERGYRAVAPDLRGYGDTTGA 75
Query: 89 ACLDQN--TTWDLIDDIEKLRQHLEIPEWQVF--GGSWGSTLALAYSLAHPDKVTGLV-- 142
D + + L+ D+ L + + E +VF WG+ +A L PDKV LV
Sbjct: 76 PLNDPSKFSILHLVGDVVALLEAIAPNEEKVFVVAHDWGALIAWHLCLFRPDKVKALVNL 135
Query: 143 ------------------------------------------------LRGIFLLRKKEI 154
L+ I R
Sbjct: 136 SVHFSKRNPKMNVVEGLKAIYGEDHYISRFQVPGEIEAEFAPIGAKSVLKKILTYRDPAP 195
Query: 155 DWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSK 191
+F +G PDA + + E E + + + +
Sbjct: 196 FYFPKGKGLEAIPDAPVALSSWLSEEELDYYANKFEQ 232
|
| >3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis} Length = 330 | Back alignment and structure |
|---|
Score = 52.5 bits (126), Expect = 6e-08
Identities = 26/106 (24%), Positives = 37/106 (34%), Gaps = 13/106 (12%)
Query: 43 PTGHPVVFLHGGPGGGTTPSNRRFFD---PDF-YRIILFDQRGAGKSTPHACLDQN-TTW 97
+ V+FLHGG N +D + D G G S D N +
Sbjct: 79 GSAPRVIFLHGGGQ------NAHTWDTVIVGLGEPALAVDLPGHGHS-AWR-EDGNYSPQ 130
Query: 98 DLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVL 143
+ + + + L V G S G A+ + PD V LVL
Sbjct: 131 LNSETLAPVLRELAPGAEFVVGMSLGGLTAIRLAAMAPDLVGELVL 176
|
| >2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A* Length = 251 | Back alignment and structure |
|---|
Score = 51.2 bits (123), Expect = 1e-07
Identities = 18/119 (15%), Positives = 39/119 (32%), Gaps = 8/119 (6%)
Query: 32 IHTIYWEQSGNPTGHP-VVFLHGGPGGGTTPSNR---RFFDPDFYRIILFDQRGAGKST- 86
++ NP P + +HG G + + D G GKS
Sbjct: 13 LNAYLDMPKNNPEKCPLCIIIHGFTGHSEERHIVAVQETLNEIGVATLRADMYGHGKSDG 72
Query: 87 --PHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVL 143
L + T +++ ++ ++ + + + G S G + + D + L+
Sbjct: 73 KFEDHTLFKWLT-NILAVVDYAKKLDFVTDIYMAGHSQGGLSVMLAAAMERDIIKALIP 130
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* Length = 555 | Back alignment and structure |
|---|
Score = 51.4 bits (123), Expect = 2e-07
Identities = 26/146 (17%), Positives = 47/146 (32%), Gaps = 9/146 (6%)
Query: 6 KELPELNTNLYPYVEPYSTGILKVSDIHTIYWEQSGNPTGH--------PVVFLHGGPGG 57
KEL ++ SD+ Y H V HG P
Sbjct: 211 KELEKVTGIQLLNTPAPLPTSCNPSDMSHGYVTVKPRVRLHFVELGSGPAVCLCHGFPES 270
Query: 58 GTT-PSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQ 116
+ YR++ D +G G+S+ +++ L ++ L + +
Sbjct: 271 WYSWRYQIPALAQAGYRVLAMDMKGYGESSAPPEIEEYCMEVLCKEMVTFLDKLGLSQAV 330
Query: 117 VFGGSWGSTLALAYSLAHPDKVTGLV 142
G WG L +L +P++V +
Sbjct: 331 FIGHDWGGMLVWYMALFYPERVRAVA 356
|
| >1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11 Length = 294 | Back alignment and structure |
|---|
Score = 49.9 bits (120), Expect = 4e-07
Identities = 34/198 (17%), Positives = 61/198 (30%), Gaps = 40/198 (20%)
Query: 44 TGHPVVFLHGGPGGGTTPSNRRFFDPDF--------------YRIILFDQRGAGKSTPHA 89
G ++ LHG + P F Y +I+ D RG G S
Sbjct: 28 AGPTLLLLHG-------------W-PGFWWEWSKVIGPLAEHYDVIVPDLRGFGDSEKPD 73
Query: 90 CLDQN--TTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVL---- 143
D + + DD L L I + V G + + + + + D+V +
Sbjct: 74 LNDLSKYSLDKAADDQAALLDALGIEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPI 133
Query: 144 -----RGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDK 198
F L W+ + + + S R++ + + F D +S R +
Sbjct: 134 QPDFGPVYFGLGHVHESWYSQFHQLDMAVEVVGSSREVCKKYFKHFF-DHWSYRDELLTE 192
Query: 199 ETQYAAARAWTKWEMMTA 216
E K + +
Sbjct: 193 EELEVHVDNCMKPDNIHG 210
|
| >3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP} Length = 291 | Back alignment and structure |
|---|
Score = 49.5 bits (119), Expect = 5e-07
Identities = 24/117 (20%), Positives = 43/117 (36%), Gaps = 31/117 (26%)
Query: 44 TGHPVVFLHGGPGGGTTPSNRRFFDPDF--------------YRIILFDQRGAGKSTPHA 89
G P++ LHG + P + ++ D RG G S+ A
Sbjct: 24 HGAPLLLLHG-------------Y-PQTHVMWHKIAPLLANNFTVVATDLRGYGDSSRPA 69
Query: 90 CLDQNTTWD---LIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVL 143
+ + + + D ++ L ++ V G G+ +A +L HP +V L L
Sbjct: 70 SVPHHINYSKRVMAQDQVEVMSKLGYEQFYVVGHDRGARVAHRLALDHPHRVKKLAL 126
|
| >3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A Length = 306 | Back alignment and structure |
|---|
Score = 49.6 bits (119), Expect = 5e-07
Identities = 20/117 (17%), Positives = 44/117 (37%), Gaps = 31/117 (26%)
Query: 44 TGHPVVFLHGGPGGGTTPSNRRFFDPDF--------------YRIILFDQRGAGKSTPHA 89
G P++ LHG F P +++I+ D G G S
Sbjct: 32 DGPPLLLLHG-------------F-PQTHVMWHRVAPKLAERFKVIVADLPGYGWSDMPE 77
Query: 90 CLDQNTTWD---LIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVL 143
+Q+T + + + + + L + + G + G+ ++ +L P +++ L +
Sbjct: 78 SDEQHTPYTKRAMAKQLIEAMEQLGHVHFALAGHNRGARVSYRLALDSPGRLSKLAV 134
|
| >1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E Length = 320 | Back alignment and structure |
|---|
Score = 49.3 bits (117), Expect = 6e-07
Identities = 13/107 (12%), Positives = 31/107 (28%), Gaps = 11/107 (10%)
Query: 43 PTGHPVVFLHGGPGGGTTPSNRRFFDP-------DFYRIILFDQRGAGKSTPHACLDQNT 95
T +P++ +HG G ++ + + + G
Sbjct: 6 ATRYPIILVHGLTGTDKYAGVLEYWYGIQEDLQQRGATVYVANLSGFQSDDGPN----GR 61
Query: 96 TWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLV 142
L+ ++ + + + G S G + + PD V +
Sbjct: 62 GEQLLAYVKTVLAATGATKVNLVGHSQGGLTSRYVAAVAPDLVASVT 108
|
| >3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A* Length = 270 | Back alignment and structure |
|---|
Score = 49.0 bits (117), Expect = 6e-07
Identities = 21/140 (15%), Positives = 42/140 (30%), Gaps = 14/140 (10%)
Query: 16 YPYVEPYSTGILKV---SDIHTIY--WEQSGNPTGHPVVFLHGGPG---GGTTPSNRRFF 67
Y G+ + D + E+ + HG
Sbjct: 12 SGRENLYFQGMATITLERDGLQLVGTREEPFGEIYDMAIIFHGFTANRNTSLLREIANSL 71
Query: 68 DPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDD----IEKLRQHLEIPEWQVFGGSWG 123
+ + FD G G S + T + I+D + ++ + + G + G
Sbjct: 72 RDENIASVRFDFNGHGDSDGK--FENMTVLNEIEDANAILNYVKTDPHVRNIYLVGHAQG 129
Query: 124 STLALAYSLAHPDKVTGLVL 143
+A + +PD + +VL
Sbjct: 130 GVVASMLAGLYPDLIKKVVL 149
|
| >3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A Length = 304 | Back alignment and structure |
|---|
Score = 48.4 bits (116), Expect = 1e-06
Identities = 23/117 (19%), Positives = 39/117 (33%), Gaps = 31/117 (26%)
Query: 44 TGHPVVFLHGGPGGGTTPSNRRFFDPDF--------------YRIILFDQRGAGKSTPHA 89
+G ++ LHG F P Y ++ D RG G S+
Sbjct: 24 SGPALLLLHG-------------F-PQNLHMWARVAPLLANEYTVVCADLRGYGGSSKPV 69
Query: 90 CLDQNTTWD---LIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVL 143
+ + + D +L + L + + G + G +L HPD V L +
Sbjct: 70 GAPDHANYSFRAMASDQRELMRTLGFERFHLVGHARGGRTGHRMALDHPDSVLSLAV 126
|
| >3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV} Length = 290 | Back alignment and structure |
|---|
Score = 48.3 bits (115), Expect = 1e-06
Identities = 29/153 (18%), Positives = 47/153 (30%), Gaps = 22/153 (14%)
Query: 43 PTGHP-VVFLHGGPGGGTTPSNRRFFDPDF-------YRIILFDQRGAGKS--TPHACLD 92
PTG P V+F+HG G ++ + FD RG +
Sbjct: 25 PTGMPGVLFVHGWGG------SQHHSLVRAREAVGLGCICMTFDLRGHEGYASMRQSVTR 78
Query: 93 QNTTWDLIDDIEKLRQHLEIPEWQV--FGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLR 150
D+ ++L + + G S+G L+ L V L LR L +
Sbjct: 79 AQNLDDIKAAYDQLASLPYVDAHSIAVVGLSYGGYLSAL--LTRERPVEWLALRSPALYK 136
Query: 151 KKEIDWFYEGGAAAIYPDAWESFRDLIPENERS 183
D + PD + R + +
Sbjct: 137 DAHWDQPK--VSLNADPDLMDYRRRALAPGDNL 167
|
| >2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2} Length = 354 | Back alignment and structure |
|---|
Score = 46.9 bits (110), Expect = 5e-06
Identities = 33/278 (11%), Positives = 81/278 (29%), Gaps = 24/278 (8%)
Query: 43 PTGHPVVFLHGGPGGGTTPSNRRFFDPDF----YRIILFDQRGAGKSTPHACLDQNTTWD 98
+G +V + T P R+ + + D R + T +
Sbjct: 61 SSGEQLVTISWNGVHYTIPDYRKSIVLYLARNGFNVYTIDYRTHYVPPFLKDRQLSFTAN 120
Query: 99 -----LIDD----IEKLRQHLEIPEWQVFGGSWGSTLALAYSLAH-PDKVTGLVLRGIFL 148
I D + +++ + G S+G AL YS + + + GL+L
Sbjct: 121 WGWSTWISDIKEVVSFIKRDSGQERIYLAGESFGGIAALNYSSLYWKNDIKGLILLDGGP 180
Query: 149 LRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYS-KRLNSDDKETQYAAARA 207
+ FY +I + + + + +Y+ + + +Y +
Sbjct: 181 TKHGIRPKFYTPEVNSIEEMEAKGIYVIPSRGGPNNPIWSYALANPDMPSPDPKYKSISD 240
Query: 208 WTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHI 267
+ + + ++D+F + A + ++ F + I +
Sbjct: 241 FLMDSLYVTGSANPYDYPYSKKEDMFPI-LASFDPYWPYRLSLERDLKFDYEGIL----V 295
Query: 268 NATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGH 305
+ +D ++ ++ GH
Sbjct: 296 PTIAFVSERF----GIQIFDSKILPSNSEIILLKGYGH 329
|
| >3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A Length = 301 | Back alignment and structure |
|---|
Score = 44.9 bits (107), Expect = 1e-05
Identities = 28/199 (14%), Positives = 56/199 (28%), Gaps = 43/199 (21%)
Query: 44 TGHPVVFLHGGPGGGTTPSNRRFFDPDF--------------YRIILFDQRGAGKST-PH 88
G V+ +HG F + +I D G G+S P
Sbjct: 29 QGPLVMLVHG-------------F-GQTWYEWHQLMPELAKRFTVIAPDLPGLGQSEPPK 74
Query: 89 ACLDQNTTWDLIDDIEKLRQHLEIPEW-QVFGGSWGSTLALAYSLAHPDKVTGLVLRGIF 147
+ + KL + + G + + + LV
Sbjct: 75 TGYS---GEQVAVYLHKLARQFSPDRPFDLVAHDIGIWNTYPMVVKNQADIARLVYMEAP 131
Query: 148 L--LRKKEIDWFYEGGAAAIYPDAWESFRDLIPE-----NER---SCFVDAYSKRLNSDD 197
+ R F G + ++ ++ + D + E ER F+ +++
Sbjct: 132 IPDARIYRFPAFTAQGESLVWHFSFFAADDRLAETLIAGKERFFLEHFIKSHASNTEVFS 191
Query: 198 KETQYAAARAWTKWEMMTA 216
+ AR++ K + A
Sbjct: 192 ERLLDLYARSYAKPHSLNA 210
|
| >3jyh_A Dipeptidyl-peptidase 2; structural genomics, structural genomics consortium, SGC, aminopeptidase, cleavage on PAIR of basic residues; HET: NAG BMA; 2.19A {Homo sapiens} PDB: 3n0t_A* Length = 469 | Back alignment and structure |
|---|
Score = 44.9 bits (105), Expect = 2e-05
Identities = 25/144 (17%), Positives = 47/144 (32%), Gaps = 20/144 (13%)
Query: 36 YW--EQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYR-----IILFDQRGAGKSTPH 88
+ ++ P+ F G G +N F + ++ + R GKS P
Sbjct: 34 FLVSDRFWVRGEGPIFFYTGNEGDVWAFANNSAFVAELAAERGALLVFAEHRYYGKSLPF 93
Query: 89 -------ACLDQNTTWDLIDDIEKLRQHL------EIPEWQVFGGSWGSTLALAYSLAHP 135
+ T + D +L + L + FGGS+G L+ + +P
Sbjct: 94 GAQSTQRGHTELLTVEQALADFAELLRALRRDLGAQDAPAIAFGGSYGGMLSAYLRMKYP 153
Query: 136 DKVTGLVLRGIFLLRKKEIDWFYE 159
V G + +L + +
Sbjct: 154 HLVAGALAASAPVLAVAGLGDSNQ 177
|
| >2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36 Length = 220 | Back alignment and structure |
|---|
Score = 43.7 bits (102), Expect = 3e-05
Identities = 19/113 (16%), Positives = 34/113 (30%), Gaps = 6/113 (5%)
Query: 36 YWEQSGNPTGHPVVFLHGGPGGGTTPSNR------RFFDPDFYRIILFDQRGAGKSTPHA 89
E + H G + N+ R ++ F+ R G S
Sbjct: 28 LPEPDVAVQPVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFRSVGTSAGSF 87
Query: 90 CLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLV 142
DL E +R + G S+G+ ++L + A +V +
Sbjct: 88 DHGDGEQDDLRAVAEWVRAQRPTDTLWLAGFSFGAYVSLRAAAALEPQVLISI 140
|
| >2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36 Length = 249 | Back alignment and structure |
|---|
Score = 43.4 bits (101), Expect = 4e-05
Identities = 19/107 (17%), Positives = 40/107 (37%), Gaps = 7/107 (6%)
Query: 37 WEQSGNPTGHPVVFLHGGPGGGTTPSNR------RFFDPDFYRIILFDQRGAGKSTPHAC 90
++ S + + LH P G T +N+ F + + F+ R G+S
Sbjct: 39 YQPSKEKSAPIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTLRFNFRSIGRSQGEFD 98
Query: 91 LDQNTTWDLIDDIEKLR-QHLEIPEWQVFGGSWGSTLALAYSLAHPD 136
D ++ ++ H + V G S+G+ + + + P+
Sbjct: 99 HGAGELSDAASALDWVQSLHPDSKSCWVAGYSFGAWIGMQLLMRRPE 145
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 44.1 bits (103), Expect = 5e-05
Identities = 35/215 (16%), Positives = 70/215 (32%), Gaps = 48/215 (22%)
Query: 136 DKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDA-----------WESFRDLIPENERSC 184
DK+T ++ + +L E ++ +++P + W D+I +
Sbjct: 353 DKLTTIIESSLNVLEPAEYRKMFD--RLSVFPPSAHIPTILLSLIWF---DVIKSDVMV- 406
Query: 185 FVDAYSKR--LNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIEN 242
V+ K + KE+ + + E +K ++ ++L I +
Sbjct: 407 VVNKLHKYSLVEKQPKESTI------------SIPSIYLELKVKL--ENEYAL-HRSIVD 451
Query: 243 HYFLNKGFFPSDSFLLDNIDN-----I-RHINATIVQGRYDVCCPMMSAWDLHKAWPEAD 296
HY + K F SD + +D I H+ R + L + E
Sbjct: 452 HYNIPKT-FDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMT----LFRMVFLDFRFLEQ- 505
Query: 297 FKVVADAGHSANEPGIAAELVATNEKLKNLIKNGH 331
K+ D + N G + + K I +
Sbjct: 506 -KIRHD-STAWNASGSILNTLQQLKFYKPYICDND 538
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 41.4 bits (96), Expect = 4e-04
Identities = 48/382 (12%), Positives = 89/382 (23%), Gaps = 130/382 (34%)
Query: 9 PELNTNLY-PYVEPYSTGILKVSDIHT----IYWE-----QSGNPTGHPVVFLHGGPGGG 58
P + T +Y + + + Y + P V + G G G
Sbjct: 105 PSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRP--AKNVLIDGVLGSG 162
Query: 59 TT----------PSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEK-LR 107
T + F+ + ++P L+ L+ I+
Sbjct: 163 KTWVALDVCLSYKVQCKMDFKIFW--LNLKNC----NSPETVLEM--LQKLLYQIDPNWT 214
Query: 108 QHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGL-VLRGIFLLRKKEIDWFYEGGAAAIY 166
+ L L L VL +
Sbjct: 215 SRSDHSSNIKLRIHSIQA-ELRRLLKSKPYENCLLVLLNV---------Q---------N 255
Query: 167 PDAWESF----------RD------LIPENERSCFVDAYSKRLNSDDKETQYAAARAWTK 210
AW +F R L +D +S L D+ ++ K
Sbjct: 256 AKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLL------K 309
Query: 211 WEMMTAHLLPNE-------------ENIKRGEDDIFSLAFARIEN--HYFLNKGFFPSDS 255
+ LP E E+I+ G A +N H +K
Sbjct: 310 YLDCRPQDLPREVLTTNPRRLSIIAESIRDG--------LATWDNWKHVNCDK------- 354
Query: 256 FLLDNIDN-IRHINATIVQGRY--------DVCCPMMSAWDLHKAWPEADFKVVADAGHS 306
L I++ + + + + P + L W + V
Sbjct: 355 -LTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTIL---LSLIWFDVIKSDVMV---- 406
Query: 307 ANEPGIAAELVATNEKLKNLIK 328
+ +L +L++
Sbjct: 407 -----VVNKLHK-----YSLVE 418
|
| >3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii} Length = 208 | Back alignment and structure |
|---|
Score = 41.6 bits (97), Expect = 1e-04
Identities = 23/117 (19%), Positives = 42/117 (35%), Gaps = 8/117 (6%)
Query: 32 IHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNR------RFFDPDFYRIILFDQRGAGKS 85
+ + G + H P G T +N+ + D + + F+ RG GKS
Sbjct: 18 LEVMITRPKGIEKSVTGIICHPHPLHGGTMNNKVVTTLAKALDELGLKTVRFNFRGVGKS 77
Query: 86 TPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLV 142
DL + + H + + G S+G+ ++ A+ KV L+
Sbjct: 78 QGRYDNGVGEVEDLKAVLRWVEHHWSQDDIWLAGFSFGAYISAKV--AYDQKVAQLI 132
|
| >3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} Length = 270 | Back alignment and structure |
|---|
Score = 40.9 bits (96), Expect = 3e-04
Identities = 29/150 (19%), Positives = 46/150 (30%), Gaps = 13/150 (8%)
Query: 37 WEQSGNPTGHPVVFLHGGPGGGTTPSNR---RFFDPDFYRIILFDQRGAGKSTPHACLDQ 93
+ P G V+ +HG GT S R + Y + L +G G
Sbjct: 34 FYAENGPVG--VLLVHGF--TGTPHSMRPLAEAYAKAGYTVCLPRLKGHGTH-YEDMER- 87
Query: 94 NTTW-DLIDDIEKLRQHL--EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLR 150
TT+ D + +E+ L V G S G TL L + HPD + + +
Sbjct: 88 -TTFHDWVASVEEGYGWLKQRCQTIFVTGLSMGGTLTLYLAEHHPDICGIVPINAAVDIP 146
Query: 151 KKEIDWFYEGGAAAIYPDAWESFRDLIPEN 180
G ++ +
Sbjct: 147 AIAAGMTGGGELPRYLDSIGSDLKNPDVKE 176
|
| >3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A Length = 415 | Back alignment and structure |
|---|
Score = 41.5 bits (97), Expect = 3e-04
Identities = 19/116 (16%), Positives = 39/116 (33%), Gaps = 8/116 (6%)
Query: 35 IYWEQSGNPTGHPVVFLHGGPGG---GTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACL 91
++ + P HPVV + G R ++ D G S+ + L
Sbjct: 184 LHLTNTDKP--HPVVIVSAGLDSLQTDMWRLFRDHLAKHDIAMLTVDMPSVGYSSKYP-L 240
Query: 92 DQNTTWDLIDDIEKLRQHLEIPEWQV--FGGSWGSTLALAYSLAHPDKVTGLVLRG 145
++ + + +L + +V G +G + S +K+ V+ G
Sbjct: 241 TEDYSRLHQAVLNELFSIPYVDHHRVGLIGFRFGGNAMVRLSFLEQEKIKACVILG 296
|
| >2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39 Length = 131 | Back alignment and structure |
|---|
Score = 39.3 bits (91), Expect = 3e-04
Identities = 15/96 (15%), Positives = 29/96 (30%), Gaps = 12/96 (12%)
Query: 34 TIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQ 93
+ +++ G G PV+ + S P+ Y L D G G++ +
Sbjct: 13 NLVFDRVGK--GPPVLLVAE------EASRWPEALPEGYAFYLLDLPGYGRTEG----PR 60
Query: 94 NTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALA 129
+L + + + V G L
Sbjct: 61 MAPEELAHFVAGFAVMMNLGAPWVLLRGLGLALGPH 96
|
| >2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis} Length = 223 | Back alignment and structure |
|---|
Score = 39.9 bits (93), Expect = 4e-04
Identities = 23/109 (21%), Positives = 35/109 (32%), Gaps = 11/109 (10%)
Query: 48 VVFLHGGPGGGTTPSNR---RFFDPDFYRIILFDQRGAGKSTPHACLDQNT------TWD 98
V+F HG +P NR +L D +
Sbjct: 38 VLFAHGSGSSRYSPRNRYVAEVLQQAGLATLLIDLLTQEEEEIDLRTRHLRFDIGLLASR 97
Query: 99 LIDDIEKLRQHLEIPEWQV--FGGSWGSTLALAYSLAHPDKVTGLVLRG 145
L+ + L + + +V FG S G AL + P+ V +V RG
Sbjct: 98 LVGATDWLTHNPDTQHLKVGYFGASTGGGAALVAAAERPETVQAVVSRG 146
|
| >1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13 Length = 305 | Back alignment and structure |
|---|
Score = 40.4 bits (94), Expect = 5e-04
Identities = 14/131 (10%), Positives = 44/131 (33%), Gaps = 20/131 (15%)
Query: 26 ILKVSDIHTI-----YWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDF----YRIIL 76
+L+V++ + +++ + ++ G + + +
Sbjct: 11 VLRVNNGQELHVWETPPKENVPFKNNTILIAS---GFARRMDHFAGLAEYLSTNGFHVFR 67
Query: 77 FDQRG-AGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQ---VFGGSWGSTLALAYSL 132
+D G S+ +D+ T + + + L+ Q + S + +AY +
Sbjct: 68 YDSLHHVGLSSGS--IDEFTMTTGKNSLCTVYHWLQTKGTQNIGLIAASLSA--RVAYEV 123
Query: 133 AHPDKVTGLVL 143
+++ L+
Sbjct: 124 ISDLELSFLIT 134
|
| >1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27 Length = 238 | Back alignment and structure |
|---|
Score = 39.3 bits (91), Expect = 8e-04
Identities = 20/133 (15%), Positives = 43/133 (32%), Gaps = 17/133 (12%)
Query: 27 LKVSDIHTIYW-EQSGNPTGHPVVFLHGGPGGGTTPSNR-RFFDPDFYRIILFDQRGAGK 84
L ++ + + ++ ++ LHG G + + ++ FD G+
Sbjct: 8 LTLAGLSVLARIPEAPKAL---LLALHGLQGSKEHILALLPGYAERGFLLLAFDAPRHGE 64
Query: 85 S--TPHACLDQNTTWDL----IDDIEKLRQHLEIPEWQ------VFGGSWGSTLALAYSL 132
P + ++ + E+ R+ E E + + GGS G+ +A
Sbjct: 65 REGPPPSSKSPRYVEEVYRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLA 124
Query: 133 AHPDKVTGLVLRG 145
L G
Sbjct: 125 EGFRPRGVLAFIG 137
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 331 | |||
| 1wm1_A | 317 | Proline iminopeptidase; complex with inhibitor, hy | 100.0 | |
| 1azw_A | 313 | Proline iminopeptidase; aminopeptidase, serine pro | 100.0 | |
| 3om8_A | 266 | Probable hydrolase; structural genomics, PSI-2, pr | 100.0 | |
| 2yys_A | 286 | Proline iminopeptidase-related protein; TTHA1809, | 100.0 | |
| 2xua_A | 266 | PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, cate | 100.0 | |
| 1b6g_A | 310 | Haloalkane dehalogenase; hydrolase, alpha/beta-hyd | 100.0 | |
| 3v48_A | 268 | Aminohydrolase, putative aminoacrylate hydrolase R | 100.0 | |
| 2xt0_A | 297 | Haloalkane dehalogenase; hydrolase, alpha-beta hyd | 100.0 | |
| 3afi_E | 316 | Haloalkane dehalogenase; A/B-hydrolase, hydrolase; | 100.0 | |
| 3fob_A | 281 | Bromoperoxidase; structural genomics, IDP00046, ba | 100.0 | |
| 1iup_A | 282 | META-cleavage product hydrolase; aromatic compound | 100.0 | |
| 2puj_A | 286 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; | 100.0 | |
| 1zoi_A | 276 | Esterase; alpha/beta hydrolase fold; 1.60A {Pseudo | 100.0 | |
| 3ia2_A | 271 | Arylesterase; alpha-beta hydrolase fold, transitio | 100.0 | |
| 3nwo_A | 330 | PIP, proline iminopeptidase; structural genomics, | 100.0 | |
| 1q0r_A | 298 | RDMC, aclacinomycin methylesterase; anthracycline, | 100.0 | |
| 1a88_A | 275 | Chloroperoxidase L; haloperoxidase, oxidoreductase | 100.0 | |
| 1mtz_A | 293 | Proline iminopeptidase; alpha-beta hydrolase, CAP | 100.0 | |
| 1a8q_A | 274 | Bromoperoxidase A1; haloperoxidase, oxidoreductase | 100.0 | |
| 3oos_A | 278 | Alpha/beta hydrolase family protein; APC67239.0, p | 100.0 | |
| 3g9x_A | 299 | Haloalkane dehalogenase; alpha/beta hydrolase, hel | 100.0 | |
| 1brt_A | 277 | Bromoperoxidase A2; haloperoxidase, oxidoreductase | 100.0 | |
| 2wue_A | 291 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolas | 100.0 | |
| 2ocg_A | 254 | Valacyclovir hydrolase; alpha beta hydrolase fold; | 100.0 | |
| 1a8s_A | 273 | Chloroperoxidase F; haloperoxidase, oxidoreductase | 100.0 | |
| 1ehy_A | 294 | Protein (soluble epoxide hydrolase); alpha/beta hy | 100.0 | |
| 3bwx_A | 285 | Alpha/beta hydrolase; YP_496220.1, joint center fo | 100.0 | |
| 2xmz_A | 269 | Hydrolase, alpha/beta hydrolase fold family; menaq | 100.0 | |
| 3bf7_A | 255 | Esterase YBFF; thioesterase, helical CAP, hydrolas | 100.0 | |
| 3u1t_A | 309 | DMMA haloalkane dehalogenase; alpha/beta-hydrolase | 100.0 | |
| 1u2e_A | 289 | 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase | 100.0 | |
| 3kda_A | 301 | CFTR inhibitory factor (CIF); alpha/beta hydrolase | 100.0 | |
| 1j1i_A | 296 | META cleavage compound hydrolase; carbazole degrad | 100.0 | |
| 1c4x_A | 285 | BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-di | 100.0 | |
| 2wj6_A | 276 | 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxid | 100.0 | |
| 1wom_A | 271 | RSBQ, sigma factor SIGB regulation protein RSBQ; a | 100.0 | |
| 3r0v_A | 262 | Alpha/beta hydrolase fold protein; structural geno | 100.0 | |
| 1hkh_A | 279 | Gamma lactamase; hydrolase, alpha/beta hydrolase, | 100.0 | |
| 3fsg_A | 272 | Alpha/beta superfamily hydrolase; PF00561, MCSG, P | 100.0 | |
| 2psd_A | 318 | Renilla-luciferin 2-monooxygenase; alpha/beta-hydr | 100.0 | |
| 3ibt_A | 264 | 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, | 100.0 | |
| 3hss_A | 293 | Putative bromoperoxidase; alpha beta hydrolase, ox | 100.0 | |
| 3r40_A | 306 | Fluoroacetate dehalogenase; FACD, defluorinase, al | 100.0 | |
| 1mj5_A | 302 | 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; | 100.0 | |
| 2r11_A | 306 | Carboxylesterase NP; 2632844, putative hydrolase, | 100.0 | |
| 2qvb_A | 297 | Haloalkane dehalogenase 3; RV2579, alpha-beta hydr | 100.0 | |
| 2cjp_A | 328 | Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tu | 100.0 | |
| 3qyj_A | 291 | ALR0039 protein; alpha/beta fold, hydrolase; 1.78A | 100.0 | |
| 4fbl_A | 281 | LIPS lipolytic enzyme; thermostable, structural ge | 100.0 | |
| 1m33_A | 258 | BIOH protein; alpha-betta-alpha sandwich, structur | 100.0 | |
| 4g9e_A | 279 | AHL-lactonase, alpha/beta hydrolase fold protein; | 100.0 | |
| 4dnp_A | 269 | DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petu | 100.0 | |
| 3kxp_A | 314 | Alpha-(N-acetylaminomethylene)succinic acid hydrol | 100.0 | |
| 3vdx_A | 456 | Designed 16NM tetrahedral protein CAGE containing | 100.0 | |
| 3p2m_A | 330 | Possible hydrolase; alpha/beta hydrolase superfami | 100.0 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 100.0 | |
| 3qit_A | 286 | CURM TE, polyketide synthase; thioesterase, alpha/ | 100.0 | |
| 2wtm_A | 251 | EST1E; hydrolase; 1.60A {Clostridium proteoclastic | 100.0 | |
| 3i1i_A | 377 | Homoserine O-acetyltransferase; structural genomic | 100.0 | |
| 2wfl_A | 264 | Polyneuridine-aldehyde esterase; alkaloid metaboli | 100.0 | |
| 3c6x_A | 257 | Hydroxynitrilase; atomic resolution, hydroxynitril | 100.0 | |
| 1xkl_A | 273 | SABP2, salicylic acid-binding protein 2; alpha-bet | 100.0 | |
| 4f0j_A | 315 | Probable hydrolytic enzyme; alpha/beta hydrolase f | 100.0 | |
| 2pl5_A | 366 | Homoserine O-acetyltransferase; alpha/beta hydrola | 100.0 | |
| 3e0x_A | 245 | Lipase-esterase related protein; APC60309, clostri | 100.0 | |
| 2qmq_A | 286 | Protein NDRG2, protein NDR2; alpha/beta-hydrolases | 100.0 | |
| 1tqh_A | 247 | Carboxylesterase precursor; tetrahedral intermedia | 100.0 | |
| 1tht_A | 305 | Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1. | 100.0 | |
| 3l80_A | 292 | Putative uncharacterized protein SMU.1393C; alpha/ | 100.0 | |
| 2e3j_A | 356 | Epoxide hydrolase EPHB; epoxide hydrolase B, struc | 100.0 | |
| 3dqz_A | 258 | Alpha-hydroxynitrIle lyase-like protein; A/B-hydrl | 100.0 | |
| 3qvm_A | 282 | OLEI00960; structural genomics, PSI-biology, midwe | 100.0 | |
| 3sty_A | 267 | Methylketone synthase 1; alpha/beta hydrolase, dec | 100.0 | |
| 3llc_A | 270 | Putative hydrolase; structural genomics, joint cen | 100.0 | |
| 3pe6_A | 303 | Monoglyceride lipase; alpha-beta hydrolase fold, 2 | 100.0 | |
| 2vat_A | 444 | Acetyl-COA--deacetylcephalosporin C acetyltransfer | 100.0 | |
| 3b12_A | 304 | Fluoroacetate dehalogenase; dehalogease, hydrolase | 100.0 | |
| 2b61_A | 377 | Homoserine O-acetyltransferase; acyl-enzyme, aspar | 100.0 | |
| 3pfb_A | 270 | Cinnamoyl esterase; alpha/beta hydrolase fold, hyd | 100.0 | |
| 3bdi_A | 207 | Uncharacterized protein TA0194; NP_393672.1, predi | 100.0 | |
| 3hju_A | 342 | Monoglyceride lipase; alpha/beta hydrolase, hydrol | 100.0 | |
| 1r3d_A | 264 | Conserved hypothetical protein VC1974; structural | 100.0 | |
| 1k8q_A | 377 | Triacylglycerol lipase, gastric; APHA beta hydrola | 100.0 | |
| 3c5v_A | 316 | PME-1, protein phosphatase methylesterase 1; demet | 99.98 | |
| 1imj_A | 210 | CIB, CCG1-interacting factor B; alpha/beta hydrola | 99.98 | |
| 3rm3_A | 270 | MGLP, thermostable monoacylglycerol lipase; alpha/ | 99.98 | |
| 2y6u_A | 398 | Peroxisomal membrane protein LPX1; hydrolase, puta | 99.98 | |
| 3dkr_A | 251 | Esterase D; alpha beta hydrolase, mechanism, catal | 99.97 | |
| 4i19_A | 388 | Epoxide hydrolase; structural genomics, PSI-biolog | 99.97 | |
| 3fla_A | 267 | RIFR; alpha-beta hydrolase thioesterase, hydrolase | 99.97 | |
| 1pja_A | 302 | Palmitoyl-protein thioesterase 2 precursor; hydrol | 99.97 | |
| 3g02_A | 408 | Epoxide hydrolase; alpha/beta hydrolase fold, enan | 99.97 | |
| 2i3d_A | 249 | AGR_C_3351P, hypothetical protein ATU1826; structu | 99.97 | |
| 3trd_A | 208 | Alpha/beta hydrolase; cellular processes; 1.50A {C | 99.97 | |
| 3ksr_A | 290 | Putative serine hydrolase; catalytic triad, struct | 99.96 | |
| 3h04_A | 275 | Uncharacterized protein; protein with unknown func | 99.96 | |
| 2rau_A | 354 | Putative esterase; NP_343859.1, putative lipase, s | 99.96 | |
| 2q0x_A | 335 | Protein DUF1749, uncharacterized protein; alpha/be | 99.96 | |
| 3fcy_A | 346 | Xylan esterase 1; alpha/beta hydrolase, carbohydra | 99.96 | |
| 2o2g_A | 223 | Dienelactone hydrolase; YP_324580.1, structural ge | 99.96 | |
| 1qlw_A | 328 | Esterase; anisotropic refinement, atomic resolutio | 99.96 | |
| 1ufo_A | 238 | Hypothetical protein TT1662; alpha-beta fold, hydr | 99.96 | |
| 3qmv_A | 280 | Thioesterase, REDJ; alpha/beta hydrolase fold, hyd | 99.96 | |
| 2qs9_A | 194 | Retinoblastoma-binding protein 9; B5T overexpresse | 99.96 | |
| 1jfr_A | 262 | Lipase; serine hydrolase; 1.90A {Streptomyces exfo | 99.95 | |
| 1zi8_A | 236 | Carboxymethylenebutenolidase; alpha and beta prote | 99.95 | |
| 3ils_A | 265 | PKS, aflatoxin biosynthesis polyketide synthase; A | 99.95 | |
| 1isp_A | 181 | Lipase; alpha/beta hydrolase fold, hydrolase; 1.30 | 99.95 | |
| 3fnb_A | 405 | Acylaminoacyl peptidase SMU_737; alpha-beta-alpha | 99.95 | |
| 1uxo_A | 192 | YDEN protein; hydrolase, A/B hydrolase, esterase, | 99.95 | |
| 2qjw_A | 176 | Uncharacterized protein XCC1541; putative hydrolas | 99.95 | |
| 3bdv_A | 191 | Uncharacterized protein DUF1234; DUF1234 family pr | 99.95 | |
| 2fuk_A | 220 | XC6422 protein; A/B hydrolase, structural genomics | 99.94 | |
| 1fj2_A | 232 | Protein (acyl protein thioesterase 1); alpha/beta | 99.94 | |
| 2jbw_A | 386 | Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine | 99.94 | |
| 2pbl_A | 262 | Putative esterase/lipase/thioesterase; alpha/beta- | 99.94 | |
| 3vis_A | 306 | Esterase; alpha/beta-hydrolase fold, polyethylene | 99.94 | |
| 1l7a_A | 318 | Cephalosporin C deacetylase; structural genomics, | 99.94 | |
| 3k2i_A | 422 | Acyl-coenzyme A thioesterase 4; alpha/beta hydrola | 99.94 | |
| 2h1i_A | 226 | Carboxylesterase; structural genomics, PSI-2, prot | 99.94 | |
| 3hxk_A | 276 | Sugar hydrolase; alpha-beta protein., structural g | 99.94 | |
| 1vlq_A | 337 | Acetyl xylan esterase; TM0077, structural genomics | 99.93 | |
| 4fle_A | 202 | Esterase; structural genomics, PSI-biology, northe | 99.93 | |
| 1auo_A | 218 | Carboxylesterase; hydrolase; 1.80A {Pseudomonas fl | 99.93 | |
| 3cn9_A | 226 | Carboxylesterase; alpha/beta hydrolase fold super- | 99.93 | |
| 1vkh_A | 273 | Putative serine hydrolase; structural genomics, jo | 99.93 | |
| 2k2q_B | 242 | Surfactin synthetase thioesterase subunit; A/B-hyd | 99.93 | |
| 1kez_A | 300 | Erythronolide synthase; polyketide synthase, modul | 99.93 | |
| 2r8b_A | 251 | AGR_C_4453P, uncharacterized protein ATU2452; APC6 | 99.93 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.93 | |
| 2hdw_A | 367 | Hypothetical protein PA2218; alpha/beta hydrolase | 99.93 | |
| 3hlk_A | 446 | Acyl-coenzyme A thioesterase 2, mitochondrial; alp | 99.93 | |
| 3f67_A | 241 | Putative dienelactone hydrolase; alpha-beta-alpha | 99.93 | |
| 3d7r_A | 326 | Esterase; alpha/beta fold, hydrolase; 2.01A {Staph | 99.93 | |
| 3lcr_A | 319 | Tautomycetin biosynthetic PKS; alpha-beta hydrolas | 99.93 | |
| 3mve_A | 415 | FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/ | 99.92 | |
| 2c7b_A | 311 | Carboxylesterase, ESTE1; carboxyesterase, thermoph | 99.92 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.92 | |
| 3og9_A | 209 | Protein YAHD A copper inducible hydrolase; alpha/b | 99.92 | |
| 3bjr_A | 283 | Putative carboxylesterase; structural genomics, jo | 99.92 | |
| 2fx5_A | 258 | Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pse | 99.92 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.92 | |
| 3bxp_A | 277 | Putative lipase/esterase; putative carboxylesteras | 99.92 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.92 | |
| 4h0c_A | 210 | Phospholipase/carboxylesterase; PSI-biology, midwe | 99.92 | |
| 3ain_A | 323 | 303AA long hypothetical esterase; carboxylesterase | 99.91 | |
| 3b5e_A | 223 | MLL8374 protein; NP_108484.1, carboxylesterase, st | 99.91 | |
| 1jji_A | 311 | Carboxylesterase; alpha-beta hydrolase fold, hydro | 99.91 | |
| 2wir_A | 313 | Pesta, alpha/beta hydrolase fold-3 domain protein; | 99.91 | |
| 4ao6_A | 259 | Esterase; hydrolase, thermo label; 1.60A {Unidenti | 99.91 | |
| 2o7r_A | 338 | CXE carboxylesterase; alpha/beta hydrolase; 1.40A | 99.9 | |
| 2zsh_A | 351 | Probable gibberellin receptor GID1L1; plant hormon | 99.9 | |
| 3u0v_A | 239 | Lysophospholipase-like protein 1; alpha, beta hydr | 99.9 | |
| 3k6k_A | 322 | Esterase/lipase; alpha/beta hydrolase fold; 2.20A | 99.9 | |
| 1jkm_A | 361 | Brefeldin A esterase; serine hydrolase, degradatio | 99.9 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.9 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.89 | |
| 1lzl_A | 323 | Heroin esterase; alpha/beta hydrolase; 1.30A {Rhod | 99.89 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.89 | |
| 3tej_A | 329 | Enterobactin synthase component F; nonribosomal pe | 99.89 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 99.89 | |
| 4e15_A | 303 | Kynurenine formamidase; alpha/beta hydrolase fold, | 99.89 | |
| 2qru_A | 274 | Uncharacterized protein; alpha/beta-hydrolase, str | 99.88 | |
| 2hm7_A | 310 | Carboxylesterase; alpha/beta hydrolase fold, hydro | 99.88 | |
| 3fle_A | 249 | SE_1780 protein; structural genomics, APC61035.1, | 99.88 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 99.88 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 99.88 | |
| 3fak_A | 322 | Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Unc | 99.88 | |
| 1tca_A | 317 | Lipase; hydrolase(carboxylic esterase); HET: NAG; | 99.87 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 99.87 | |
| 3ds8_A | 254 | LIN2722 protein; unkonwn function, structural geno | 99.87 | |
| 3lp5_A | 250 | Putative cell surface hydrolase; structural genom | 99.87 | |
| 1ycd_A | 243 | Hypothetical 27.3 kDa protein in AAP1-SMF2 interge | 99.87 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 99.87 | |
| 3ga7_A | 326 | Acetyl esterase; phosphoserine, IDP00896, hydrolas | 99.86 | |
| 4hvt_A | 711 | Ritya.17583.B, post-proline cleaving enzyme; ssgci | 99.86 | |
| 3qh4_A | 317 | Esterase LIPW; structural genomics, ssgcid, seattl | 99.86 | |
| 2hfk_A | 319 | Pikromycin, type I polyketide synthase pikaiv; alp | 99.86 | |
| 3e4d_A | 278 | Esterase D; S-formylglutathione hydrolase, hydrola | 99.86 | |
| 3h2g_A | 397 | Esterase; xanthomonas oryzae PV. oryzae, cell WALL | 99.85 | |
| 3tjm_A | 283 | Fatty acid synthase; thioesterase domain, fatty ac | 99.85 | |
| 3doh_A | 380 | Esterase; alpha-beta hydrolase, beta sheet; 2.60A | 99.85 | |
| 3i6y_A | 280 | Esterase APC40077; lipase, structural genomics, PS | 99.85 | |
| 1lns_A | 763 | X-prolyl dipeptidyl aminopetidase; alpha beta hydr | 99.84 | |
| 4f21_A | 246 | Carboxylesterase/phospholipase family protein; str | 99.84 | |
| 2cb9_A | 244 | Fengycin synthetase; thioesterase, non-ribosomal p | 99.84 | |
| 4fhz_A | 285 | Phospholipase/carboxylesterase; alpha/beta hydrola | 99.84 | |
| 1ei9_A | 279 | Palmitoyl protein thioesterase 1; alpha/beta hydro | 99.83 | |
| 3ebl_A | 365 | Gibberellin receptor GID1; alpha/beta hydrolase, l | 99.83 | |
| 1jmk_C | 230 | SRFTE, surfactin synthetase; thioesterase, non-rib | 99.83 | |
| 4ezi_A | 377 | Uncharacterized protein; alpha-beta hydrolases fol | 99.83 | |
| 3fcx_A | 282 | FGH, esterase D, S-formylglutathione hydrolase; re | 99.83 | |
| 3ls2_A | 280 | S-formylglutathione hydrolase; psychrophilic organ | 99.82 | |
| 2uz0_A | 263 | Esterase, tributyrin esterase; alpha/beta hydrolas | 99.82 | |
| 3d59_A | 383 | Platelet-activating factor acetylhydrolase; secret | 99.81 | |
| 3d0k_A | 304 | Putative poly(3-hydroxybutyrate) depolymerase LPQ; | 99.81 | |
| 3icv_A | 316 | Lipase B, CALB; circular permutation, cleavage on | 99.8 | |
| 4b6g_A | 283 | Putative esterase; hydrolase, formaldehyde detoxif | 99.8 | |
| 2dst_A | 131 | Hypothetical protein TTHA1544; conserved hypotheti | 99.8 | |
| 1gpl_A | 432 | RP2 lipase; serine esterase, hydrolase, lipid degr | 99.79 | |
| 1jjf_A | 268 | Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-x | 99.77 | |
| 1r88_A | 280 | MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBP | 99.77 | |
| 2zyr_A | 484 | Lipase, putative; fatty acid, hydrolase; HET: 1PE; | 99.77 | |
| 1ys1_X | 320 | Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor h | 99.75 | |
| 1bu8_A | 452 | Protein (pancreatic lipase related protein 2); hyd | 99.74 | |
| 1ex9_A | 285 | Lactonizing lipase; alpha-beta hydrolase fold, pho | 99.73 | |
| 1mpx_A | 615 | Alpha-amino acid ester hydrolase; alpha/beta hydro | 99.73 | |
| 1dqz_A | 280 | 85C, protein (antigen 85-C); fibronectin, structur | 99.73 | |
| 3i2k_A | 587 | Cocaine esterase; alpha/beta hydrolase, hydrolase; | 99.73 | |
| 1w52_X | 452 | Pancreatic lipase related protein 2; detergent, cl | 99.72 | |
| 1sfr_A | 304 | Antigen 85-A; alpha/beta hydrolase, structural gen | 99.72 | |
| 2x5x_A | 342 | PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE | 99.71 | |
| 3g8y_A | 391 | SUSD/RAGB-associated esterase-like protein; struct | 99.71 | |
| 3iii_A | 560 | COCE/NOND family hydrolase; structural genomics, c | 99.69 | |
| 2b9v_A | 652 | Alpha-amino acid ester hydrolase; catalytic triad, | 99.69 | |
| 1rp1_A | 450 | Pancreatic lipase related protein 1; hydrolase, li | 99.69 | |
| 1hpl_A | 449 | Lipase; hydrolase(carboxylic esterase); 2.30A {Equ | 99.68 | |
| 3guu_A | 462 | Lipase A; protein structure, hydrolase; HET: 1PE; | 99.67 | |
| 3nuz_A | 398 | Putative acetyl xylan esterase; structural genomic | 99.67 | |
| 3n2z_B | 446 | Lysosomal Pro-X carboxypeptidase; alpha/beta hydro | 99.65 | |
| 2hih_A | 431 | Lipase 46 kDa form; A1 phospholipase, phospholipid | 99.59 | |
| 1gkl_A | 297 | Endo-1,4-beta-xylanase Y; hydrolase, esterase fami | 99.56 | |
| 2dsn_A | 387 | Thermostable lipase; T1 lipase, hydrolase; 1.50A { | 99.55 | |
| 2px6_A | 316 | Thioesterase domain; thioesaterse domain, orlistat | 99.51 | |
| 2qm0_A | 275 | BES; alpha-beta structure, structural genomics, PS | 99.43 | |
| 3c8d_A | 403 | Enterochelin esterase; alpha-beta-alpha sandwich, | 99.41 | |
| 1ivy_A | 452 | Human protective protein; carboxypeptidase, serine | 99.37 | |
| 2d81_A | 318 | PHB depolymerase; alpha/beta hydrolase fold, circu | 99.2 | |
| 1ac5_A | 483 | KEX1(delta)P; carboxypeptidase, hydrolase, glycopr | 99.03 | |
| 1cpy_A | 421 | Serine carboxypeptidase; hydrolase (carboxypeptida | 99.0 | |
| 2gzs_A | 278 | IROE protein; enterobactin, salmochelin, DFP, hydr | 98.97 | |
| 3gff_A | 331 | IROE-like serine hydrolase; NP_718593.1, structura | 98.93 | |
| 2ogt_A | 498 | Thermostable carboxylesterase EST50; alpha/beta hy | 98.89 | |
| 4g4g_A | 433 | 4-O-methyl-glucuronoyl methylesterase; alpha/beta | 98.87 | |
| 1qe3_A | 489 | PNB esterase, para-nitrobenzyl esterase; alpha-bet | 98.86 | |
| 1whs_A | 255 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 98.85 | |
| 3pic_A | 375 | CIP2; alpha/beta hydrolase fold, glucuronoyl ester | 98.81 | |
| 2fj0_A | 551 | JuvenIle hormone esterase; manduca sexta, alpha-be | 98.75 | |
| 2h7c_A | 542 | Liver carboxylesterase 1; enzyme, cholesteryl este | 98.74 | |
| 4fol_A | 299 | FGH, S-formylglutathione hydrolase; D-type esteras | 98.69 | |
| 2ha2_A | 543 | ACHE, acetylcholinesterase; hydrolase fold, serine | 98.65 | |
| 2vsq_A | 1304 | Surfactin synthetase subunit 3; ligase, peptidyl c | 98.63 | |
| 1ea5_A | 537 | ACHE, acetylcholinesterase; hydrolase, serine hydr | 98.58 | |
| 1p0i_A | 529 | Cholinesterase; serine hydrolase, butyrate, hydrol | 98.58 | |
| 4az3_A | 300 | Lysosomal protective protein 32 kDa chain; hydrola | 98.52 | |
| 1ukc_A | 522 | ESTA, esterase; fungi, A/B hydrolase fold, acetylc | 98.49 | |
| 2bce_A | 579 | Cholesterol esterase; hydrolase, serine esterase, | 98.33 | |
| 3bix_A | 574 | Neuroligin-1, neuroligin I; esterase domain, alpha | 98.3 | |
| 1dx4_A | 585 | ACHE, acetylcholinesterase; hydrolase, serine este | 98.28 | |
| 1thg_A | 544 | Lipase; hydrolase(carboxylic esterase); HET: NAG N | 98.25 | |
| 1llf_A | 534 | Lipase 3; candida cylindracea cholesterol esterase | 98.2 | |
| 4ebb_A | 472 | Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2 | 98.11 | |
| 1tib_A | 269 | Lipase; hydrolase(carboxylic esterase); 1.84A {The | 98.04 | |
| 1gxs_A | 270 | P-(S)-hydroxymandelonitrIle lyase chain A; inhibit | 97.99 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 97.97 | |
| 1whs_B | 153 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 97.84 | |
| 1tia_A | 279 | Lipase; hydrolase(carboxylic esterase); 2.10A {Pen | 97.65 | |
| 1tgl_A | 269 | Triacyl-glycerol acylhydrolase; carboxylic esteras | 97.62 | |
| 1lgy_A | 269 | Lipase, triacylglycerol lipase; hydrolase (carboxy | 97.23 | |
| 3hc7_A | 254 | Gene 12 protein, GP12; alpha/beta sandwich, cell a | 97.11 | |
| 4az3_B | 155 | Lysosomal protective protein 20 kDa chain; hydrola | 97.06 | |
| 1uwc_A | 261 | Feruloyl esterase A; hydrolase, serine esterase, x | 97.03 | |
| 3g7n_A | 258 | Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A | 97.02 | |
| 3uue_A | 279 | LIP1, secretory lipase (family 3); LID-domain, hyd | 96.9 | |
| 3qpa_A | 197 | Cutinase; alpha-beta hydrolase fold, esterase, hyd | 96.75 | |
| 1gxs_B | 158 | P-(S)-hydroxymandelonitrIle lyase chain B; inhibit | 96.66 | |
| 3ngm_A | 319 | Extracellular lipase; secret lipase, hydrolase; 2. | 96.66 | |
| 3o0d_A | 301 | YALI0A20350P, triacylglycerol lipase; alpha/beta-h | 96.65 | |
| 3dcn_A | 201 | Cutinase, cutin hydrolase; catalytic triad, secret | 96.37 | |
| 1g66_A | 207 | Acetyl xylan esterase II; serine hydrolase, acetyl | 96.02 | |
| 3qpd_A | 187 | Cutinase 1; alpha-beta hydrolase fold, esterase, h | 95.88 | |
| 1qoz_A | 207 | AXE, acetyl xylan esterase; hydrolase, xylan degra | 95.84 | |
| 2czq_A | 205 | Cutinase-like protein; alpha/beta hydrolase fold, | 95.6 | |
| 3aja_A | 302 | Putative uncharacterized protein; alpha-beta hydro | 95.4 | |
| 2ory_A | 346 | Lipase; alpha/beta hydrolase, hydrolase; 2.20A {Ph | 94.41 | |
| 2yij_A | 419 | Phospholipase A1-iigamma; hydrolase; 2.00A {Arabid | 92.9 | |
| 3pa8_A | 254 | Toxin B; CLAN CD cysteine protease, protease, toxi | 88.58 | |
| 3ho6_A | 267 | Toxin A; inositol phosphate, enterotoxin; HET: IHP | 85.79 |
| >1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-42 Score=280.82 Aligned_cols=308 Identities=51% Similarity=1.016 Sum_probs=198.7
Q ss_pred CCCCCCCccceeEeCCCceEEEEeCCCCCCCcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccc
Q 020064 16 YPYVEPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNT 95 (331)
Q Consensus 16 ~~~~~~~~~~~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~ 95 (331)
+|+..+.+..++++.+|.+++|...|++++++|||+||++++..+......+..++|+||++|+||||.|........++
T Consensus 8 ~~~~~~~~~~~~~~~~g~~l~~~~~g~~~g~~vvllHG~~~~~~~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~ 87 (317)
T 1wm1_A 8 YPPLAAYDSGWLDTGDGHRIYWELSGNPNGKPAVFIHGGPGGGISPHHRQLFDPERYKVLLFDQRGCGRSRPHASLDNNT 87 (317)
T ss_dssp CCCCCCSEEEEEECSSSCEEEEEEEECTTSEEEEEECCTTTCCCCGGGGGGSCTTTEEEEEECCTTSTTCBSTTCCTTCS
T ss_pred CCCCccceeeEEEcCCCcEEEEEEcCCCCCCcEEEECCCCCcccchhhhhhccccCCeEEEECCCCCCCCCCCccccccc
Confidence 44455677888999888899999998767889999999876654444444454689999999999999998654334578
Q ss_pred hHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhc
Q 020064 96 TWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRD 175 (331)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (331)
.+++++|+.++++.++.++++|+||||||.+++.+|.++|++|+++|++++.........+....+.....+..+..+..
T Consensus 88 ~~~~~~dl~~l~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (317)
T 1wm1_A 88 TWHLVADIERLREMAGVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFTLRKQRLHWYYQDGASRFFPEKWERVLS 167 (317)
T ss_dssp HHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCHHHHHHHHTSSGGGTSHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCCCcEEEEEeCHHHHHHHHHHHHCChheeeeeEeccCCCchhhhhHHhhccchhhcHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999998765443322232221222233334443333
Q ss_pred cCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcc
Q 020064 176 LIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDS 255 (331)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (331)
.++..........+...+..............|..+..........+.... .....+...+......++....+.. ..
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 245 (317)
T 1wm1_A 168 ILSDDERKDVIAAYRQRLTSADPQVQLEAAKLWSVWEGETVTLLPSRESAS-FGEDDFALAFARIENHYFTHLGFLE-SD 245 (317)
T ss_dssp TSCTTGGGCHHHHHHHHHTCSCHHHHHHHHHHHHHHHHTTSSSSCCGGGGG-GGCHHHHHHHHHHHHHHHHTGGGCS-ST
T ss_pred hccchhhcchHHHHHhhhcCCCccccccccccccccccchhhccCCccccc-ccccchhhhHHHhhhhhhhcccccc-cc
Confidence 332222212222222222222222222222233322221111111111111 1111122222222222221111211 11
Q ss_pred h-hhhhccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHH
Q 020064 256 F-LLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKN 325 (331)
Q Consensus 256 ~-~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~ 325 (331)
. ..+.+.+++++|+|+|+|++|.++|++.++.+.+.+|++++++++++||+++.++.++++++.|.+|+.
T Consensus 246 ~~~~~~~~~i~~~P~lii~G~~D~~~~~~~~~~l~~~~p~~~~~~i~~~gH~~~~~~~~~~~~~~i~~f~~ 316 (317)
T 1wm1_A 246 DQLLRNVPLIRHIPAVIVHGRYDMACQVQNAWDLAKAWPEAELHIVEGAGHSYDEPGILHQLMIATDRFAG 316 (317)
T ss_dssp THHHHTGGGGTTSCEEEEEETTCSSSCHHHHHHHHHHCTTSEEEEETTCCSSTTSHHHHHHHHHHHHHHTC
T ss_pred hhhHhhcccccCCCEEEEEecCCCCCCHHHHHHHHhhCCCceEEEECCCCCCCCCcchHHHHHHHHHHHhc
Confidence 2 455677772299999999999999999999999999999999999999998665348899999999975
|
| >1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-42 Score=280.04 Aligned_cols=308 Identities=57% Similarity=1.043 Sum_probs=191.4
Q ss_pred CCCCCCCccceeEeCCCceEEEEeCCCCCCCcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccc
Q 020064 16 YPYVEPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNT 95 (331)
Q Consensus 16 ~~~~~~~~~~~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~ 95 (331)
.|...+++..++++.+|.+++|...|++++++|||+||++++..+......+..++|+||++|+||||.|........++
T Consensus 5 ~~~~~~~~~~~~~~~~g~~l~y~~~G~~~g~pvvllHG~~~~~~~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~ 84 (313)
T 1azw_A 5 YPEITPYQQGSLKVDDRHTLYFEQCGNPHGKPVVMLHGGPGGGCNDKMRRFHDPAKYRIVLFDQRGSGRSTPHADLVDNT 84 (313)
T ss_dssp CCCCCCSEEEEEECSSSCEEEEEEEECTTSEEEEEECSTTTTCCCGGGGGGSCTTTEEEEEECCTTSTTSBSTTCCTTCC
T ss_pred CCCCCccccceEEcCCCCEEEEEecCCCCCCeEEEECCCCCccccHHHHHhcCcCcceEEEECCCCCcCCCCCccccccc
Confidence 45556778888999888899999998767889999999876654444444454689999999999999998654334578
Q ss_pred hHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhc
Q 020064 96 TWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRD 175 (331)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (331)
++++++|+.++++.++.++++|+||||||.+++.+|.++|++|+++|++++.........+....+.....+..+..+..
T Consensus 85 ~~~~~~dl~~l~~~l~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (313)
T 1azw_A 85 TWDLVADIERLRTHLGVDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIFLLRRFELEWFYQEGASRLFPDAWEHYLN 164 (313)
T ss_dssp HHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCHHHHHHHHTSSHHHHCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCceEEEEECHHHHHHHHHHHhChhheeEEEEeccccCchhhhHHHHhhhhhhhchHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999998765433222222111111112223333222
Q ss_pred cCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcc
Q 020064 176 LIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDS 255 (331)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (331)
.+...........+...+..............|..+..........+..........+...+......++....+.....
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (313)
T 1azw_A 165 AIPPVERADLMSAFHRRLTSDDEATRLAAAKAWSVWEGATSFLHVDEDFVTGHEDAHFALAFARIENHYFVNGGFFEVED 244 (313)
T ss_dssp TSCGGGTTSHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHTCHHHHHHHHHHHHHHHHTGGGCSSTT
T ss_pred ccCchhhhhhhhhhhhhccccCcchhhhhhhHHhhhhccccccccccccchhccccchhhHHHHhhhhhhcccccccccc
Confidence 22221111122222222222222222112222222222111111111111111111111111111111111111111012
Q ss_pred hhhhhccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHH
Q 020064 256 FLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKL 323 (331)
Q Consensus 256 ~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~f 323 (331)
+..+.+.+++++|+|+|+|++|.++|++.++.+.+.+|++++++++++||+++.++..+++++.|.+|
T Consensus 245 ~~~~~~~~i~~~P~Lii~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~~gH~~~~~~~~~~~~~~i~~f 312 (313)
T 1azw_A 245 QLLRDAHRIADIPGVIVHGRYDVVCPLQSAWDLHKAWPKAQLQISPASGHSAFEPENVDALVRATDGF 312 (313)
T ss_dssp HHHHTGGGGTTCCEEEEEETTCSSSCHHHHHHHHHHCTTSEEEEETTCCSSTTSHHHHHHHHHHHHHH
T ss_pred hhhhhcccccCCCEEEEecCCCCcCCHHHHHHHHhhCCCcEEEEeCCCCCCcCCCccHHHHHHHHhhc
Confidence 34456777722999999999999999999999999999999999999999986543467777777766
|
| >3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-42 Score=269.95 Aligned_cols=259 Identities=15% Similarity=0.125 Sum_probs=175.6
Q ss_pred cceeEeCCCceEEEEeCCCCCCCcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHH
Q 020064 24 TGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDI 103 (331)
Q Consensus 24 ~~~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~ 103 (331)
..++.+.||.+++|...|++++|+|||+||++.+...|......+.++|+||++|+||||.|+.+. ..++++++++|+
T Consensus 6 ~~~~~~~~g~~l~y~~~G~~~~p~lvl~hG~~~~~~~w~~~~~~L~~~~~vi~~D~rG~G~S~~~~--~~~~~~~~a~dl 83 (266)
T 3om8_A 6 LSFLATSDGASLAYRLDGAAEKPLLALSNSIGTTLHMWDAQLPALTRHFRVLRYDARGHGASSVPP--GPYTLARLGEDV 83 (266)
T ss_dssp CEEEECTTSCEEEEEEESCTTSCEEEEECCTTCCGGGGGGGHHHHHTTCEEEEECCTTSTTSCCCC--SCCCHHHHHHHH
T ss_pred ceEEeccCCcEEEEEecCCCCCCEEEEeCCCccCHHHHHHHHHHhhcCcEEEEEcCCCCCCCCCCC--CCCCHHHHHHHH
Confidence 456777888899999999767899999999877755554444444568999999999999998765 468999999999
Q ss_pred HHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhh
Q 020064 104 EKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERS 183 (331)
Q Consensus 104 ~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (331)
.++++.++.++++|+||||||.+++.+|.++|++|+++|++++.........+... ....... ....
T Consensus 84 ~~~l~~l~~~~~~lvGhS~Gg~va~~~A~~~P~rv~~lvl~~~~~~~~~~~~~~~~----------~~~~~~~---~~~~ 150 (266)
T 3om8_A 84 LELLDALEVRRAHFLGLSLGGIVGQWLALHAPQRIERLVLANTSAWLGPAAQWDER----------IAAVLQA---EDMS 150 (266)
T ss_dssp HHHHHHTTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSBCCCSHHHHHH----------HHHHHHC---SSSH
T ss_pred HHHHHHhCCCceEEEEEChHHHHHHHHHHhChHhhheeeEecCcccCCchhHHHHH----------HHHHHcc---ccHH
Confidence 99999999999999999999999999999999999999999976542211111000 0000000 0000
Q ss_pred hhHHhhccccCCCchHH-HHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhcc
Q 020064 184 CFVDAYSKRLNSDDKET-QYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNID 262 (331)
Q Consensus 184 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 262 (331)
.........+....... .......+.. .........+...+..+. ..+..+.+.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~------------~~d~~~~l~ 205 (266)
T 3om8_A 151 ETAAGFLGNWFPPALLERAEPVVERFRA-------------MLMATNRHGLAGSFAAVR------------DTDLRAQLA 205 (266)
T ss_dssp HHHHHHHHHHSCHHHHHSCCHHHHHHHH-------------HHHTSCHHHHHHHHHHHH------------TCBCTTTGG
T ss_pred HHHHHHHHHhcChhhhhcChHHHHHHHH-------------HHHhCCHHHHHHHHHHhh------------ccchhhHhc
Confidence 00000000000000000 0000000000 000000001111111110 234456788
Q ss_pred ccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHH
Q 020064 263 NIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKN 325 (331)
Q Consensus 263 ~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~ 325 (331)
+| ++|+|+|+|++|.++|++.++.+.+.+|++++++++ +||+++.|+ |+++++.|.+||+
T Consensus 206 ~i-~~P~Lvi~G~~D~~~~~~~~~~l~~~ip~a~~~~i~-~gH~~~~e~-p~~~~~~i~~Fl~ 265 (266)
T 3om8_A 206 RI-ERPTLVIAGAYDTVTAASHGELIAASIAGARLVTLP-AVHLSNVEF-PQAFEGAVLSFLG 265 (266)
T ss_dssp GC-CSCEEEEEETTCSSSCHHHHHHHHHHSTTCEEEEES-CCSCHHHHC-HHHHHHHHHHHHT
T ss_pred CC-CCCEEEEEeCCCCCCCHHHHHHHHHhCCCCEEEEeC-CCCCccccC-HHHHHHHHHHHhc
Confidence 99 599999999999999999999999999999999997 899999997 9999999999985
|
| >2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-39 Score=256.42 Aligned_cols=268 Identities=20% Similarity=0.246 Sum_probs=172.0
Q ss_pred ceeEeCCCceEEEEeCCCCCCCcEEEeccCCCCCC--CCCcccccCCCCcEEEEecCCCCCCCCC-CCCCCccchHHHHH
Q 020064 25 GILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGT--TPSNRRFFDPDFYRIILFDQRGAGKSTP-HACLDQNTTWDLID 101 (331)
Q Consensus 25 ~~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~--~~~~~~~~~~~g~~vi~~D~~G~G~s~~-~~~~~~~~~~~~~~ 101 (331)
.++.. +|.+++|...|++++|+|||+||++++.. |...+..+ +++|+||++|+||||.|+. +.....++++++++
T Consensus 6 ~~~~~-~g~~l~~~~~G~~~~~~vvllHG~~~~~~~~w~~~~~~L-~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~a~ 83 (286)
T 2yys_A 6 GYVPV-GEAELYVEDVGPVEGPALFVLHGGPGGNAYVLREGLQDY-LEGFRVVYFDQRGSGRSLELPQDPRLFTVDALVE 83 (286)
T ss_dssp EEEEC-SSCEEEEEEESCTTSCEEEEECCTTTCCSHHHHHHHGGG-CTTSEEEEECCTTSTTSCCCCSCGGGCCHHHHHH
T ss_pred eEEeE-CCEEEEEEeecCCCCCEEEEECCCCCcchhHHHHHHHHh-cCCCEEEEECCCCCCCCCCCccCcccCcHHHHHH
Confidence 34444 56699999999767899999999887766 44455555 6799999999999999987 44212689999999
Q ss_pred HHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcch
Q 020064 102 DIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENE 181 (331)
Q Consensus 102 ~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (331)
|+.++++.++.++++|+||||||.+++.+|.++|+ |+++|++++..........................+........
T Consensus 84 dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (286)
T 2yys_A 84 DTLLLAEALGVERFGLLAHGFGAVVALEVLRRFPQ-AEGAILLAPWVNFPWLAARLAEAAGLAPLPDPEENLKEALKREE 162 (286)
T ss_dssp HHHHHHHHTTCCSEEEEEETTHHHHHHHHHHHCTT-EEEEEEESCCCBHHHHHHHHHHHTTCCCCSCHHHHHHHHHHHSC
T ss_pred HHHHHHHHhCCCcEEEEEeCHHHHHHHHHHHhCcc-hheEEEeCCccCcHHHHHHHHHHhccccchhHHHHHHHHhccCC
Confidence 99999999999999999999999999999999999 99999999875221100000000000000000000000000000
Q ss_pred hhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhc
Q 020064 182 RSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNI 261 (331)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 261 (331)
.......+. +... ... ....+. .... ...........+ . +.. .. ..+..+.+
T Consensus 163 ~~~~~~~~~--~~~~--~~~--~~~~~~-----~~~~-------~~~~~~~~~~~~-~-----~~~---~~-~~~~~~~l 214 (286)
T 2yys_A 163 PKALFDRLM--FPTP--RGR--MAYEWL-----AEGA-------GILGSDAPGLAF-L-----RNG---LW-RLDYTPYL 214 (286)
T ss_dssp HHHHHHHHH--CSSH--HHH--HHHHHH-----HHHT-------TCCCCSHHHHHH-H-----HTT---GG-GCBCGGGC
T ss_pred hHHHHHhhh--ccCC--ccc--cChHHH-----HHHH-------hhccccccchhh-c-----ccc---cc-cCChhhhh
Confidence 001111111 0000 000 000000 0000 000000001110 0 000 00 12345568
Q ss_pred cccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhh
Q 020064 262 DNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNLI 327 (331)
Q Consensus 262 ~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 327 (331)
.++ ++|+|+|+|++|.+++++ ++.+.+ +|++++++++++||+++.|+ |+++++.|.+|++++
T Consensus 215 ~~i-~~P~lvi~G~~D~~~~~~-~~~~~~-~~~~~~~~i~~~gH~~~~e~-p~~~~~~i~~fl~~~ 276 (286)
T 2yys_A 215 TPE-RRPLYVLVGERDGTSYPY-AEEVAS-RLRAPIRVLPEAGHYLWIDA-PEAFEEAFKEALAAL 276 (286)
T ss_dssp CCC-SSCEEEEEETTCTTTTTT-HHHHHH-HHTCCEEEETTCCSSHHHHC-HHHHHHHHHHHHHTT
T ss_pred hhc-CCCEEEEEeCCCCcCCHh-HHHHHh-CCCCCEEEeCCCCCCcChhh-HHHHHHHHHHHHHhh
Confidence 889 599999999999999999 999999 99999999999999999997 999999999999875
|
| >2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-39 Score=256.64 Aligned_cols=257 Identities=16% Similarity=0.155 Sum_probs=170.7
Q ss_pred ceeEeCCCceEEEEeCCCCC--CCcEEEeccCCCCCCC-CCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHH
Q 020064 25 GILKVSDIHTIYWEQSGNPT--GHPVVFLHGGPGGGTT-PSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLID 101 (331)
Q Consensus 25 ~~~~~~~g~~l~~~~~g~~~--~~~vl~~HG~~~~~~~-~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~ 101 (331)
.++++ +|.+++|...|+++ +|+|||+||++++... ..++..+ .++|+|+++|+||||.|+.+. ..++++++++
T Consensus 5 ~~~~~-~g~~l~y~~~g~~~~~~~~vvllHG~~~~~~~~~~~~~~L-~~~~~vi~~D~~G~G~S~~~~--~~~~~~~~~~ 80 (266)
T 2xua_A 5 PYAAV-NGTELHYRIDGERHGNAPWIVLSNSLGTDLSMWAPQVAAL-SKHFRVLRYDTRGHGHSEAPK--GPYTIEQLTG 80 (266)
T ss_dssp CEEEC-SSSEEEEEEESCSSSCCCEEEEECCTTCCGGGGGGGHHHH-HTTSEEEEECCTTSTTSCCCS--SCCCHHHHHH
T ss_pred CeEEE-CCEEEEEEEcCCccCCCCeEEEecCccCCHHHHHHHHHHH-hcCeEEEEecCCCCCCCCCCC--CCCCHHHHHH
Confidence 34555 56699999999755 8899999997766554 4445444 567999999999999998765 4689999999
Q ss_pred HHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcch
Q 020064 102 DIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENE 181 (331)
Q Consensus 102 ~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (331)
|+.++++.++.++++|+||||||.+++.+|.++|++|+++|++++......... |...........
T Consensus 81 dl~~~l~~l~~~~~~lvGhS~Gg~va~~~A~~~p~~v~~lvl~~~~~~~~~~~~--------------~~~~~~~~~~~~ 146 (266)
T 2xua_A 81 DVLGLMDTLKIARANFCGLSMGGLTGVALAARHADRIERVALCNTAARIGSPEV--------------WVPRAVKARTEG 146 (266)
T ss_dssp HHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCSCHHH--------------HHHHHHHHHHHC
T ss_pred HHHHHHHhcCCCceEEEEECHHHHHHHHHHHhChhhhheeEEecCCCCCCchHH--------------HHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999998654211100 000000000000
Q ss_pred hhhhHHhhccccCCCchHH-HHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhh
Q 020064 182 RSCFVDAYSKRLNSDDKET-QYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDN 260 (331)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (331)
...........+....... .......+.. .+.......+...+.... ..+..+.
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~------------~~~~~~~ 201 (266)
T 2xua_A 147 MHALADAVLPRWFTADYMEREPVVLAMIRD-------------VFVHTDKEGYASNCEAID------------AADLRPE 201 (266)
T ss_dssp HHHHHHHHHHHHSCHHHHHHCHHHHHHHHH-------------HHHTSCHHHHHHHHHHHH------------HCCCGGG
T ss_pred hHHHHHHHHHHHcCcccccCCHHHHHHHHH-------------HHhhCCHHHHHHHHHHHh------------ccCchhh
Confidence 0000000000000000000 0000000000 000000011111111000 1123456
Q ss_pred ccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhh
Q 020064 261 IDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNLI 327 (331)
Q Consensus 261 l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 327 (331)
+.++ ++|+|+|+|++|.++|++.++.+.+.+|++++++++ +||+++.++ |+++++.|.+|++++
T Consensus 202 l~~i-~~P~lvi~G~~D~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~e~-p~~~~~~i~~fl~~~ 265 (266)
T 2xua_A 202 APGI-KVPALVISGTHDLAATPAQGRELAQAIAGARYVELD-ASHISNIER-ADAFTKTVVDFLTEQ 265 (266)
T ss_dssp GGGC-CSCEEEEEETTCSSSCHHHHHHHHHHSTTCEEEEES-CCSSHHHHT-HHHHHHHHHHHHTC-
T ss_pred hccC-CCCEEEEEcCCCCcCCHHHHHHHHHhCCCCEEEEec-CCCCchhcC-HHHHHHHHHHHHHhc
Confidence 7888 599999999999999999999999999999999999 999999997 999999999999765
|
| >1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-39 Score=261.23 Aligned_cols=282 Identities=18% Similarity=0.116 Sum_probs=176.2
Q ss_pred CCCccceeEeCC---CceEEEEeCCCCC-CCcEEEeccCCCCCCCC-CcccccCCCCcEEEEecCCCCCCCCCCCCCCcc
Q 020064 20 EPYSTGILKVSD---IHTIYWEQSGNPT-GHPVVFLHGGPGGGTTP-SNRRFFDPDFYRIILFDQRGAGKSTPHACLDQN 94 (331)
Q Consensus 20 ~~~~~~~~~~~~---g~~l~~~~~g~~~-~~~vl~~HG~~~~~~~~-~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~ 94 (331)
.+.+.+++++++ |.+++|...|+++ +|+|||+||++++...| ..+..+.+.||+||++|+||||.|+.+.....+
T Consensus 18 ~~~~~~~~~~~g~~~g~~l~y~~~G~~~~g~~vvllHG~~~~~~~w~~~~~~L~~~g~rvia~Dl~G~G~S~~~~~~~~y 97 (310)
T 1b6g_A 18 YPFSPNYLDDLPGYPGLRAHYLDEGNSDAEDVFLCLHGEPTWSYLYRKMIPVFAESGARVIAPDFFGFGKSDKPVDEEDY 97 (310)
T ss_dssp CCCCCEEEESCTTCTTCEEEEEEEECTTCSCEEEECCCTTCCGGGGTTTHHHHHHTTCEEEEECCTTSTTSCEESCGGGC
T ss_pred CCCCceEEEecCCccceEEEEEEeCCCCCCCEEEEECCCCCchhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCcCCc
Confidence 445567788766 2699999998766 89999999987775544 455556556799999999999999865422468
Q ss_pred chHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccch-hhhhhhHhhc-ccccCChhhHHh
Q 020064 95 TTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLR-KKEIDWFYEG-GAAAIYPDAWES 172 (331)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~ 172 (331)
+++++++|+.++++.+++++++|+||||||.+++.+|.++|++|+++|++++.... ......+... .........|..
T Consensus 98 ~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~va~~~A~~~P~rv~~Lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (310)
T 1b6g_A 98 TFEFHRNFLLALIERLDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNAXLMTDPVTQPAFSAFVTQPADGFTAWKY 177 (310)
T ss_dssp CHHHHHHHHHHHHHHHTCCSEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCCCCCCTTTCTHHHHTTTSSTTTHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEEEcChHHHHHHHHHHhChHhheEEEEeccccccCCccccchhhhhhccchHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999985421 0000000000 000000011111
Q ss_pred hhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCC
Q 020064 173 FRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFP 252 (331)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (331)
.................. ....... ...+. ... ........ ...+...........+ .
T Consensus 178 ~~~~~~~~~~~~~~~~~~---~~~~~~~----~~~~~------~~~-~~~~~~~~--~~~~~~~~~~~~~~~~------~ 235 (310)
T 1b6g_A 178 DLVTPSDLRLDQFMKRWA---PTLTEAE----ASAYA------APF-PDTSYQAG--VRKFPKMVAQRDQAXI------D 235 (310)
T ss_dssp HHHSCSSCCHHHHHHHHS---TTCCHHH----HHHHH------TTC-SSGGGCHH--HHHHHHHHHSCCHHHH------H
T ss_pred HhccCchhhhhhHHhhcC---CCCCHHH----HHHHh------ccc-CCccchHH--HHHHHHHhcccccchh------h
Confidence 111000000000000000 0001100 00000 000 00000000 0000000000000000 0
Q ss_pred Ccchhhhhcc-ccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEe--cCCCCCCCcCCchhHHHHHHHHHHHhh
Q 020064 253 SDSFLLDNID-NIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVV--ADAGHSANEPGIAAELVATNEKLKNLI 327 (331)
Q Consensus 253 ~~~~~~~~l~-~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~--~~~gH~~~~~~~~~~~~~~i~~fl~~~ 327 (331)
...+..+.+. +| ++|+|+|+|++|.++| +.++.+.+.+|+++++++ +++||+++. + |+++++.|.+|+++.
T Consensus 236 ~~~~~~~~l~~~i-~~P~Lvi~G~~D~~~~-~~~~~~~~~ip~~~~~~i~~~~~GH~~~~-~-p~~~~~~i~~Fl~~~ 309 (310)
T 1b6g_A 236 ISTEAISFWQNDW-NGQTFMAIGMKDKLLG-PDVMYPMKALINGCPEPLEIADAGHFVQE-F-GEQVAREALKHFAET 309 (310)
T ss_dssp HHHHHHHHHHHTC-CSEEEEEEETTCSSSS-HHHHHHHHHHSTTCCCCEEETTCCSCGGG-G-HHHHHHHHHHHHHHT
T ss_pred hhhhHhhhhhccc-cCceEEEeccCcchhh-hHHHHHHHhcccccceeeecCCcccchhh-C-hHHHHHHHHHHHhcc
Confidence 0112345677 89 5999999999999999 888999999999999888 999999999 7 999999999999763
|
| >3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-39 Score=255.72 Aligned_cols=258 Identities=16% Similarity=0.192 Sum_probs=167.1
Q ss_pred eEEEEeCCC--CCCCcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhC
Q 020064 34 TIYWEQSGN--PTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLE 111 (331)
Q Consensus 34 ~l~~~~~g~--~~~~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (331)
.|+|...|+ +++|+|||+||++++...|......++++|+||++|+||||.|+.+.. ..++++++++|+.++++.++
T Consensus 2 ~i~y~~~g~~~~~~~~vvllHG~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~-~~~~~~~~a~dl~~~l~~l~ 80 (268)
T 3v48_A 2 HMKLSLSPPPYADAPVVVLISGLGGSGSYWLPQLAVLEQEYQVVCYDQRGTGNNPDTLA-EDYSIAQMAAELHQALVAAG 80 (268)
T ss_dssp CSCCEECCCSSTTCCEEEEECCTTCCGGGGHHHHHHHHTTSEEEECCCTTBTTBCCCCC-TTCCHHHHHHHHHHHHHHTT
T ss_pred ceEEEecCCCCCCCCEEEEeCCCCccHHHHHHHHHHHhhcCeEEEECCCCCCCCCCCcc-ccCCHHHHHHHHHHHHHHcC
Confidence 567877774 357899999998777665544444446789999999999999986532 35899999999999999999
Q ss_pred CCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhcc
Q 020064 112 IPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSK 191 (331)
Q Consensus 112 ~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (331)
.++++|+||||||.+++.+|.++|++++++|++++............. .............+......
T Consensus 81 ~~~~~lvGhS~GG~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~ 148 (268)
T 3v48_A 81 IEHYAVVGHALGALVGMQLALDYPASVTVLISVNGWLRINAHTRRCFQ------------VRERLLYSGGAQAWVEAQPL 148 (268)
T ss_dssp CCSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCHHHHHHHH------------HHHHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEecHHHHHHHHHHHhChhhceEEEEeccccccchhhhHHHH------------HHHHHHhccchhhhhhhhhh
Confidence 999999999999999999999999999999999975543211110000 00000000000000000000
Q ss_pred ccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEE
Q 020064 192 RLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATI 271 (331)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~ 271 (331)
... .. ....................... ...+...+.... ..+..+.+.++ ++|+|+
T Consensus 149 ~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~------------~~d~~~~l~~i-~~P~Li 205 (268)
T 3v48_A 149 FLY-PA-DWMAARAPRLEAEDALALAHFQG--------KNNLLRRLNALK------------RADFSHHADRI-RCPVQI 205 (268)
T ss_dssp HHS-CH-HHHHTTHHHHHHHHHHHHHTCCC--------HHHHHHHHHHHH------------HCBCTTTGGGC-CSCEEE
T ss_pred hcC-ch-hhhhcccccchhhHHHHHhhcCc--------hhHHHHHHHHHh------------ccchhhhhhcC-CCCeEE
Confidence 000 00 00000000000000000000000 000011111000 12334567889 599999
Q ss_pred EecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhhh
Q 020064 272 VQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNLIK 328 (331)
Q Consensus 272 i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~ 328 (331)
|+|++|.++|++.++.+.+.+|++++++++++||+++.++ |+++++.|.+|+++..
T Consensus 206 i~G~~D~~~p~~~~~~l~~~~p~~~~~~~~~~GH~~~~e~-p~~~~~~i~~fl~~~~ 261 (268)
T 3v48_A 206 ICASDDLLVPTACSSELHAALPDSQKMVMPYGGHACNVTD-PETFNALLLNGLASLL 261 (268)
T ss_dssp EEETTCSSSCTHHHHHHHHHCSSEEEEEESSCCTTHHHHC-HHHHHHHHHHHHHHHH
T ss_pred EEeCCCcccCHHHHHHHHHhCCcCeEEEeCCCCcchhhcC-HHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999997 9999999999998753
|
| >2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-39 Score=257.19 Aligned_cols=272 Identities=15% Similarity=0.092 Sum_probs=172.4
Q ss_pred CCCccceeEeCC---CceEEEEeCCCCC-CCcEEEeccCCCCCC-CCCcccccCCCCcEEEEecCCCCCCCCCCCCCCcc
Q 020064 20 EPYSTGILKVSD---IHTIYWEQSGNPT-GHPVVFLHGGPGGGT-TPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQN 94 (331)
Q Consensus 20 ~~~~~~~~~~~~---g~~l~~~~~g~~~-~~~vl~~HG~~~~~~-~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~ 94 (331)
.+.+.+++++++ |.+++|...|+++ +|+|||+||++++.. |...+..+.++||+||++|+||||.|+.+.....+
T Consensus 17 ~~~~~~~~~~~g~~~g~~l~y~~~G~~~~g~~vvllHG~~~~~~~w~~~~~~L~~~g~rvia~Dl~G~G~S~~~~~~~~~ 96 (297)
T 2xt0_A 17 FPYAPHYLEGLPGFEGLRMHYVDEGPRDAEHTFLCLHGEPSWSFLYRKMLPVFTAAGGRVVAPDLFGFGRSDKPTDDAVY 96 (297)
T ss_dssp CCCCCEEECCCTTCTTCCEEEEEESCTTCSCEEEEECCTTCCGGGGTTTHHHHHHTTCEEEEECCTTSTTSCEESCGGGC
T ss_pred CCCccEEEeccCCCCceEEEEEEccCCCCCCeEEEECCCCCcceeHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCcccC
Confidence 344566777766 2699999999756 889999999877655 44555666567899999999999999866532368
Q ss_pred chHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhh
Q 020064 95 TTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFR 174 (331)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (331)
+++++++|+.++++.+++++++|+||||||.+++.+|.++|++|+++|++++.......... ....|....
T Consensus 97 ~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~---------~~~~~~~~~ 167 (297)
T 2xt0_A 97 TFGFHRRSLLAFLDALQLERVTLVCQDWGGILGLTLPVDRPQLVDRLIVMNTALAVGLSPGK---------GFESWRDFV 167 (297)
T ss_dssp CHHHHHHHHHHHHHHHTCCSEEEEECHHHHHHHTTHHHHCTTSEEEEEEESCCCCSSSCSCH---------HHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEEEECchHHHHHHHHHhChHHhcEEEEECCCCCcccCCch---------hHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999985411000000 000111111
Q ss_pred ccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCc
Q 020064 175 DLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSD 254 (331)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (331)
...+............ ........ ..+. ... ..... ......+............ ....
T Consensus 168 ~~~~~~~~~~~~~~~~---~~~~~~~~----~~~~------~~~-~~~~~------~~~~~~~~~~~~~~~~~~~-~~~~ 226 (297)
T 2xt0_A 168 ANSPDLDVGKLMQRAI---PGITDAEV----AAYD------APF-PGPEF------KAGVRRFPAIVPITPDMEG-AEIG 226 (297)
T ss_dssp HTCTTCCHHHHHHHHS---TTCCHHHH----HHHH------TTC-SSGGG------CHHHHHGGGGSCCSTTSTT-HHHH
T ss_pred hcccccchhHHHhccC---ccCCHHHH----HHHh------ccc-cCcch------hHHHHHHHHhCccccccch-hhHH
Confidence 1000000001111100 00011000 0000 000 00000 0000000000000000000 0001
Q ss_pred chhhhhcc-ccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEE--ecCCCCCCCcCCchhHHHHHHHHHHH
Q 020064 255 SFLLDNID-NIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKV--VADAGHSANEPGIAAELVATNEKLKN 325 (331)
Q Consensus 255 ~~~~~~l~-~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~--~~~~gH~~~~~~~~~~~~~~i~~fl~ 325 (331)
.+..+.+. ++ ++|+|+|+|++|.++| +.++.+.+.+|++++++ ++++||+++. + |+++++.|.+|++
T Consensus 227 ~~~~~~l~~~i-~~P~Lvi~G~~D~~~~-~~~~~~~~~~p~~~~~~~~~~~~GH~~~~-~-p~~~~~~i~~fl~ 296 (297)
T 2xt0_A 227 RQAMSFWSTQW-SGPTFMAVGAQDPVLG-PEVMGMLRQAIRGCPEPMIVEAGGHFVQE-H-GEPIARAALAAFG 296 (297)
T ss_dssp HHHHHHHHHTC-CSCEEEEEETTCSSSS-HHHHHHHHHHSTTCCCCEEETTCCSSGGG-G-CHHHHHHHHHHTT
T ss_pred HHHHHHhhhcc-CCCeEEEEeCCCcccC-hHHHHHHHhCCCCeeEEeccCCCCcCccc-C-HHHHHHHHHHHHh
Confidence 12345677 89 5999999999999999 88899999999987765 7899999998 6 9999999999985
|
| >3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-38 Score=256.43 Aligned_cols=283 Identities=14% Similarity=0.115 Sum_probs=171.2
Q ss_pred ccceeEeCCCceEEEEeCCCCCCCcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHH
Q 020064 23 STGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDD 102 (331)
Q Consensus 23 ~~~~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~ 102 (331)
+..+++++ |.+++|...|+..+|+|||+||++++...|......+.++|+||++|+||||.|+.+. ..++++++++|
T Consensus 8 ~~~~~~~~-g~~l~y~~~G~g~~~pvvllHG~~~~~~~w~~~~~~L~~~~~via~Dl~G~G~S~~~~--~~~~~~~~a~d 84 (316)
T 3afi_E 8 EIRRAPVL-GSSMAYRETGAQDAPVVLFLHGNPTSSHIWRNILPLVSPVAHCIAPDLIGFGQSGKPD--IAYRFFDHVRY 84 (316)
T ss_dssp --CEEEET-TEEEEEEEESCTTSCEEEEECCTTCCGGGGTTTHHHHTTTSEEEEECCTTSTTSCCCS--SCCCHHHHHHH
T ss_pred cceeEEeC-CEEEEEEEeCCCCCCeEEEECCCCCchHHHHHHHHHHhhCCEEEEECCCCCCCCCCCC--CCCCHHHHHHH
Confidence 34566665 5599999998522339999999887766555444444567999999999999998754 46899999999
Q ss_pred HHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhH-----hhcccccCChhhHHhhhccC
Q 020064 103 IEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWF-----YEGGAAAIYPDAWESFRDLI 177 (331)
Q Consensus 103 ~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 177 (331)
+.++++.++.++++|+||||||.+++.+|.++|++|+++|++++........... ............+..+. .
T Consensus 85 l~~ll~~l~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 162 (316)
T 3afi_E 85 LDAFIEQRGVTSAYLVAQDWGTALAFHLAARRPDFVRGLAFMEFIRPMPTWQDFHHTEVAEEQDHAEAARAVFRKFR--T 162 (316)
T ss_dssp HHHHHHHTTCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEECCCBSSGGGTTCCCCGGGHHHHHHHHHHHHHHT--S
T ss_pred HHHHHHHcCCCCEEEEEeCccHHHHHHHHHHCHHhhhheeeeccCCCcchhhhccchhhccccccchhHHHHHHHhc--C
Confidence 9999999999999999999999999999999999999999999743210000000 00000000000000000 0
Q ss_pred Ccch------hhhhHHhhccc-cCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCC
Q 020064 178 PENE------RSCFVDAYSKR-LNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGF 250 (331)
Q Consensus 178 ~~~~------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (331)
+... ...+...+... ....... .....+.. .. ..+... ................ ...
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~------~~-~~~~~~-----~~~~~~~~~~~~~~~~-~~~ 226 (316)
T 3afi_E 163 PGEGEAMILEANAFVERVLPGGIVRKLGD---EEMAPYRT------PF-PTPESR-----RPVLAFPRELPIAGEP-ADV 226 (316)
T ss_dssp TTHHHHHHTTSCHHHHTTTGGGCSSCCCH---HHHHHHHT------TC-CSTGGG-----HHHHHTGGGSCBTTBS-HHH
T ss_pred CchhhHHHhccchHHHHhcccccCCCCCH---HHHHHHHh------hc-CCccch-----hHHHHHHHhccccccc-hhh
Confidence 0000 00111111111 0000000 00011100 00 000000 0000000000000000 000
Q ss_pred CCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhhh
Q 020064 251 FPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNLIK 328 (331)
Q Consensus 251 ~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~ 328 (331)
.....+..+.+.++ ++|+|+|+|++|.++|++.++.+.+.+|++++++++++||+++.|+ |+++++.|.+|+++..
T Consensus 227 ~~~~~~~~~~l~~i-~~P~Lvi~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~~GH~~~~e~-p~~~~~~i~~fl~~~~ 302 (316)
T 3afi_E 227 YEALQSAHAALAAS-SYPKLLFTGEPGALVSPEFAERFAASLTRCALIRLGAGLHYLQEDH-ADAIGRSVAGWIAGIE 302 (316)
T ss_dssp HHHHHHHHHHHHHC-CSCEEEEEEEECSSSCHHHHHHHHHHSSSEEEEEEEEECSCHHHHH-HHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHhhhcc-CCCeEEEecCCCCccCHHHHHHHHHhCCCCeEEEcCCCCCCchhhC-HHHHHHHHHHHHhhcC
Confidence 00011223456778 5999999999999999999999999999999999999999999996 9999999999998764
|
| >3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-39 Score=253.93 Aligned_cols=261 Identities=21% Similarity=0.295 Sum_probs=166.6
Q ss_pred eCCCceEEEEeCCCCCCCcEEEeccCCCCCC-CCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHH
Q 020064 29 VSDIHTIYWEQSGNPTGHPVVFLHGGPGGGT-TPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLR 107 (331)
Q Consensus 29 ~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~-~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~ 107 (331)
..+|.+++|...| ++++|||+||++++.. |...+..+.++||+||++|+||||.|+.+. ..++++++++|+.+++
T Consensus 13 ~~~g~~l~y~~~G--~g~~vvllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~--~~~~~~~~a~dl~~ll 88 (281)
T 3fob_A 13 NQAPIEIYYEDHG--TGKPVVLIHGWPLSGRSWEYQVPALVEAGYRVITYDRRGFGKSSQPW--EGYEYDTFTSDLHQLL 88 (281)
T ss_dssp TTEEEEEEEEEES--SSEEEEEECCTTCCGGGGTTTHHHHHHTTEEEEEECCTTSTTSCCCS--SCCSHHHHHHHHHHHH
T ss_pred CCCceEEEEEECC--CCCeEEEECCCCCcHHHHHHHHHHHHhCCCEEEEeCCCCCCCCCCCc--cccCHHHHHHHHHHHH
Confidence 4567799999999 5889999999877654 445566666789999999999999998765 4689999999999999
Q ss_pred HHhCCCcEEEEEeChhHHHHHHHHHhC-CCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhH
Q 020064 108 QHLEIPEWQVFGGSWGSTLALAYSLAH-PDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFV 186 (331)
Q Consensus 108 ~~~~~~~v~lvG~S~Gg~~a~~~a~~~-p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (331)
+.++.++++|+||||||.+++.+++.+ |++++++|++++........... .........+..+..... .....+.
T Consensus 89 ~~l~~~~~~lvGhS~GG~i~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~-~~~~~~~ 164 (281)
T 3fob_A 89 EQLELQNVTLVGFSMGGGEVARYISTYGTDRIEKVVFAGAVPPYLYKSEDH---PEGALDDATIETFKSGVI-NDRLAFL 164 (281)
T ss_dssp HHTTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSS---TTCSBCHHHHHHHHHHHH-HHHHHHH
T ss_pred HHcCCCcEEEEEECccHHHHHHHHHHccccceeEEEEecCCCcchhccccc---cccccchhHHHHHHHHhh-hhHHHHH
Confidence 999999999999999999888776665 89999999998753211000000 000000000000000000 0000011
Q ss_pred HhhccccCCC----chHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhcc
Q 020064 187 DAYSKRLNSD----DKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNID 262 (331)
Q Consensus 187 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 262 (331)
..+...+... ...........+ ... ...........+.... ..+..+.+.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-----------~~~~~~~~~~~~~~~~------------~~d~~~~l~ 218 (281)
T 3fob_A 165 DEFTKGFFAAGDRTDLVSESFRLYNW---DIA-----------AGASPKGTLDCITAFS------------KTDFRKDLE 218 (281)
T ss_dssp HHHHHHHTCBTTBCCSSCHHHHHHHH---HHH-----------HTSCHHHHHHHHHHHH------------HCCCHHHHT
T ss_pred HHHHHHhcccccccccchHHHHHHhh---hhh-----------cccChHHHHHHHHHcc------------ccchhhhhh
Confidence 1110000000 000000000000 000 0000000000000000 223456788
Q ss_pred ccccccEEEEecCCCCccCCcch-HHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHH
Q 020064 263 NIRHINATIVQGRYDVCCPMMSA-WDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKN 325 (331)
Q Consensus 263 ~i~~~P~l~i~G~~D~~~~~~~~-~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~ 325 (331)
++ ++|+|+|+|++|.++|++.+ +.+.+.+|++++++++++||+++.++ |+++.+.|.+||+
T Consensus 219 ~i-~~P~Lii~G~~D~~~p~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e~-p~~~~~~i~~Fl~ 280 (281)
T 3fob_A 219 KF-NIPTLIIHGDSDATVPFEYSGKLTHEAIPNSKVALIKGGPHGLNATH-AKEFNEALLLFLK 280 (281)
T ss_dssp TC-CSCEEEEEETTCSSSCGGGTHHHHHHHSTTCEEEEETTCCTTHHHHT-HHHHHHHHHHHHC
T ss_pred hc-CCCEEEEecCCCCCcCHHHHHHHHHHhCCCceEEEeCCCCCchhhhh-HHHHHHHHHHHhh
Confidence 99 59999999999999998865 77788899999999999999999997 9999999999985
|
| >1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-38 Score=250.08 Aligned_cols=264 Identities=19% Similarity=0.226 Sum_probs=170.4
Q ss_pred CccceeEeCCCceEEEEeCCCCCCCcEEEeccCCCC-C---CCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchH
Q 020064 22 YSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGG-G---TTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTW 97 (331)
Q Consensus 22 ~~~~~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~-~---~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~ 97 (331)
...++++.+ |.+++|...| ++++|||+||++.+ . .|...+..+ +++|+|+++|+||||.|+.+.. ..++++
T Consensus 5 ~~~~~~~~~-g~~l~y~~~G--~g~~vvllHG~~~~~~~~~~w~~~~~~L-~~~~~vi~~Dl~G~G~S~~~~~-~~~~~~ 79 (282)
T 1iup_A 5 EIGKSILAA-GVLTNYHDVG--EGQPVILIHGSGPGVSAYANWRLTIPAL-SKFYRVIAPDMVGFGFTDRPEN-YNYSKD 79 (282)
T ss_dssp TCCEEEEET-TEEEEEEEEC--CSSEEEEECCCCTTCCHHHHHTTTHHHH-TTTSEEEEECCTTSTTSCCCTT-CCCCHH
T ss_pred cccceEEEC-CEEEEEEecC--CCCeEEEECCCCCCccHHHHHHHHHHhh-ccCCEEEEECCCCCCCCCCCCC-CCCCHH
Confidence 345667764 5699999988 57899999996543 3 333444444 7899999999999999986642 257899
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccC
Q 020064 98 DLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLI 177 (331)
Q Consensus 98 ~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (331)
++++|+.++++.++.++++|+||||||.+++.+|.++|++|+++|++++......... .........
T Consensus 80 ~~a~dl~~~l~~l~~~~~~lvGhS~GG~ia~~~A~~~P~~v~~lvl~~~~~~~~~~~~-------------~~~~~~~~~ 146 (282)
T 1iup_A 80 SWVDHIIGIMDALEIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDVTE-------------GLNAVWGYT 146 (282)
T ss_dssp HHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESCCCSCCCCCH-------------HHHHHHTCC
T ss_pred HHHHHHHHHHHHhCCCceEEEEECHhHHHHHHHHHHChHHHHHHHeeCCccCCCCCCH-------------HHHHHhcCC
Confidence 9999999999999999999999999999999999999999999999998653210000 000000000
Q ss_pred Cc-chhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcch
Q 020064 178 PE-NERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSF 256 (331)
Q Consensus 178 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (331)
+. .....+...+............. ..+. .. ..+... ..+...+......+... ...
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~---~~-----~~~~~~-----~~~~~~~~~~~~~~~~~------~~~ 204 (282)
T 1iup_A 147 PSIENMRNLLDIFAYDRSLVTDELAR---LRYE---AS-----IQPGFQ-----ESFSSMFPEPRQRWIDA------LAS 204 (282)
T ss_dssp SCHHHHHHHHHHHCSSGGGCCHHHHH---HHHH---HH-----TSTTHH-----HHHHHHSCSSTHHHHHH------HCC
T ss_pred CcHHHHHHHHHHhhcCcccCCHHHHH---HHHh---hc-----cChHHH-----HHHHHHHhccccccccc------ccc
Confidence 00 00001111110000000000000 0000 00 000000 00000000000000000 000
Q ss_pred hhhhccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhh
Q 020064 257 LLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNLI 327 (331)
Q Consensus 257 ~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 327 (331)
..+.+.++ ++|+|+|+|++|.++|++.++.+.+.+|++++++++++||+++.++ |+++.+.|.+|+++.
T Consensus 205 ~~~~l~~i-~~P~lii~G~~D~~~p~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~-p~~~~~~i~~fl~~~ 273 (282)
T 1iup_A 205 SDEDIKTL-PNETLIIHGREDQVVPLSSSLRLGELIDRAQLHVFGRCGHWTQIEQ-TDRFNRLVVEFFNEA 273 (282)
T ss_dssp CHHHHTTC-CSCEEEEEETTCSSSCHHHHHHHHHHCTTEEEEEESSCCSCHHHHS-HHHHHHHHHHHHHTC
T ss_pred chhhhhhc-CCCEEEEecCCCCCCCHHHHHHHHHhCCCCeEEEECCCCCCccccC-HHHHHHHHHHHHhcC
Confidence 11567888 5999999999999999999999999999999999999999999997 999999999999863
|
| >2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-38 Score=253.67 Aligned_cols=267 Identities=21% Similarity=0.216 Sum_probs=170.2
Q ss_pred cceeEeCC-C---ceEEEEeCCCCCCCcEEEeccCC---CCC-CCCCcc-cccCCCCcEEEEecCCCCCCCCCCCCCCcc
Q 020064 24 TGILKVSD-I---HTIYWEQSGNPTGHPVVFLHGGP---GGG-TTPSNR-RFFDPDFYRIILFDQRGAGKSTPHACLDQN 94 (331)
Q Consensus 24 ~~~~~~~~-g---~~l~~~~~g~~~~~~vl~~HG~~---~~~-~~~~~~-~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~ 94 (331)
.+++++++ | .+++|...| ++|+|||+||++ ++. .|...+ ..+ .++|+||++|+||||.|+.+.. ..+
T Consensus 10 ~~~~~~~~~g~~~~~l~y~~~G--~g~~vvllHG~~~~~~~~~~w~~~~~~~L-~~~~~vi~~D~~G~G~S~~~~~-~~~ 85 (286)
T 2puj_A 10 SKFVKINEKGFSDFNIHYNEAG--NGETVIMLHGGGPGAGGWSNYYRNVGPFV-DAGYRVILKDSPGFNKSDAVVM-DEQ 85 (286)
T ss_dssp EEEEEECSTTCSSEEEEEEEEC--CSSEEEEECCCSTTCCHHHHHTTTHHHHH-HTTCEEEEECCTTSTTSCCCCC-SSC
T ss_pred ceEEEecCCCcceEEEEEEecC--CCCcEEEECCCCCCCCcHHHHHHHHHHHH-hccCEEEEECCCCCCCCCCCCC-cCc
Confidence 45777762 5 799999988 578999999975 333 344455 455 4569999999999999987652 258
Q ss_pred chHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhh
Q 020064 95 TTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFR 174 (331)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (331)
+++++++|+.++++.++.++++|+||||||.+++.+|.++|++|+++|++++........ ............
T Consensus 86 ~~~~~a~dl~~~l~~l~~~~~~lvGhS~GG~va~~~A~~~p~~v~~lvl~~~~~~~~~~~--------~~~~~~~~~~~~ 157 (286)
T 2puj_A 86 RGLVNARAVKGLMDALDIDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMF--------APMPMEGIKLLF 157 (286)
T ss_dssp HHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSS--------SCSSCHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhCCCceEEEEECHHHHHHHHHHHhChHhhheEEEECccccCCCcc--------cccchhhHHHHH
Confidence 999999999999999999999999999999999999999999999999999865321000 000000000000
Q ss_pred ccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCc
Q 020064 175 DLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSD 254 (331)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (331)
........ .....+...+................ .... ..+. ......... ..... ..
T Consensus 158 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~----~~~~--------~~~~~~~~~----~~~~~---~~ 215 (286)
T 2puj_A 158 KLYAEPSY-ETLKQMLQVFLYDQSLITEELLQGRW--EAIQ----RQPE--------HLKNFLISA----QKAPL---ST 215 (286)
T ss_dssp HHHHSCCH-HHHHHHHHHHCSCGGGCCHHHHHHHH--HHHH----HCHH--------HHHHHHHHH----HHSCG---GG
T ss_pred HHhhCCcH-HHHHHHHHHHhcCCccCCHHHHHHHH--HHhh----cCHH--------HHHHHHHHH----hhhhc---cc
Confidence 00000000 00000000000000000000000000 0000 0000 000000000 00000 02
Q ss_pred chhhhhccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHh
Q 020064 255 SFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNL 326 (331)
Q Consensus 255 ~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 326 (331)
.+..+.+.++ ++|+|+|+|++|.++|++.++.+.+.+|++++++++++||+++.++ |+++.+.|.+|+++
T Consensus 216 ~~~~~~l~~i-~~P~Lii~G~~D~~~p~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~-p~~~~~~i~~fl~~ 285 (286)
T 2puj_A 216 WDVTARLGEI-KAKTFITWGRDDRFVPLDHGLKLLWNIDDARLHVFSKCGAWAQWEH-ADEFNRLVIDFLRH 285 (286)
T ss_dssp GCCGGGGGGC-CSCEEEEEETTCSSSCTHHHHHHHHHSSSEEEEEESSCCSCHHHHT-HHHHHHHHHHHHHH
T ss_pred cchhhHHhhc-CCCEEEEEECCCCccCHHHHHHHHHHCCCCeEEEeCCCCCCccccC-HHHHHHHHHHHHhc
Confidence 2344578889 5999999999999999999999999999999999999999999997 99999999999974
|
| >1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-38 Score=251.92 Aligned_cols=266 Identities=19% Similarity=0.222 Sum_probs=170.0
Q ss_pred eeEeCCCceEEEEeCCCCCCCcEEEeccCCCCCC-CCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHH
Q 020064 26 ILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGT-TPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIE 104 (331)
Q Consensus 26 ~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~-~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~ 104 (331)
++.+.+|.+++|...|++++|+|||+||++++.. |...+..+.++||+|+++|+||||.|+.+. ..++++++++|+.
T Consensus 3 ~~~~~~g~~l~y~~~g~~~~~~vvllHG~~~~~~~w~~~~~~L~~~g~~vi~~D~~G~G~S~~~~--~~~~~~~~~~d~~ 80 (276)
T 1zoi_A 3 YVTTKDGVQIFYKDWGPRDAPVIHFHHGWPLSADDWDAQLLFFLAHGYRVVAHDRRGHGRSSQVW--DGHDMDHYADDVA 80 (276)
T ss_dssp EEECTTSCEEEEEEESCTTSCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCS--SCCSHHHHHHHHH
T ss_pred eEECCCCcEEEEEecCCCCCCeEEEECCCCcchhHHHHHHHHHHhCCCEEEEecCCCCCCCCCCC--CCCCHHHHHHHHH
Confidence 4677788899999999767889999999876654 444566676789999999999999998654 4689999999999
Q ss_pred HHHHHhCCCcEEEEEeChhHHHHHHHHHhC-CCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhh
Q 020064 105 KLRQHLEIPEWQVFGGSWGSTLALAYSLAH-PDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERS 183 (331)
Q Consensus 105 ~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~-p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (331)
++++.++.++++|+||||||.+++.+|+.+ |++|+++|++++.......... .........+..+...... ...
T Consensus 81 ~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~-~~~ 155 (276)
T 1zoi_A 81 AVVAHLGIQGAVHVGHSTGGGEVVRYMARHPEDKVAKAVLIAAVPPLMVQTPG----NPGGLPKSVFDGFQAQVAS-NRA 155 (276)
T ss_dssp HHHHHHTCTTCEEEEETHHHHHHHHHHHHCTTSCCCCEEEESCCCSCCBCCSS----CTTSBCHHHHHHHHHHHHH-CHH
T ss_pred HHHHHhCCCceEEEEECccHHHHHHHHHHhCHHheeeeEEecCCCcccccccc----ccccccHHHHHHHHHHHHH-hHH
Confidence 999999999999999999999999988887 9999999999975421100000 0000000001000000000 000
Q ss_pred hhHHhhcc-ccCC---CchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhh
Q 020064 184 CFVDAYSK-RLNS---DDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLD 259 (331)
Q Consensus 184 ~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (331)
.+...+.. .+.. ............+.... . . ............. . ..+..+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----------~-~~~~~~~~~~~~~-----------~-~~~~~~ 210 (276)
T 1zoi_A 156 QFYRDVPAGPFYGYNRPGVEASEGIIGNWWRQG-M-----------I-GSAKAHYDGIVAF-----------S-QTDFTE 210 (276)
T ss_dssp HHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHH-H-----------H-SCHHHHHHHHHHH-----------H-SCCCHH
T ss_pred HHHHHhhhccccccccccccccHHHHHHHHhhh-h-----------h-hhHHHHHHHHHHh-----------c-ccchhh
Confidence 00000000 0000 00000000000000000 0 0 0000000000000 0 123455
Q ss_pred hccccccccEEEEecCCCCccCCc-chHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHH
Q 020064 260 NIDNIRHINATIVQGRYDVCCPMM-SAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKN 325 (331)
Q Consensus 260 ~l~~i~~~P~l~i~G~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~ 325 (331)
.+.++ ++|+|+|+|++|.++|++ ..+.+.+.+|++++++++++||+++.++ |+++++.|.+|++
T Consensus 211 ~l~~i-~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~-p~~~~~~i~~fl~ 275 (276)
T 1zoi_A 211 DLKGI-QQPVLVMHGDDDQIVPYENSGVLSAKLLPNGALKTYKGYPHGMPTTH-ADVINADLLAFIR 275 (276)
T ss_dssp HHHHC-CSCEEEEEETTCSSSCSTTTHHHHHHHSTTEEEEEETTCCTTHHHHT-HHHHHHHHHHHHT
T ss_pred hcccc-CCCEEEEEcCCCcccChHHHHHHHHhhCCCceEEEcCCCCCchhhhC-HHHHHHHHHHHhc
Confidence 67888 599999999999999987 5567778889999999999999999886 9999999999985
|
| >3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} SCOP: c.69.1.12 PDB: 1va4_A 3t52_A* 3t4u_A* 3hi4_A 3hea_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-38 Score=250.08 Aligned_cols=260 Identities=21% Similarity=0.281 Sum_probs=167.8
Q ss_pred eeEeCCCceEEEEeCCCCCCCcEEEeccCCCCCCC-CCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHH
Q 020064 26 ILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTT-PSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIE 104 (331)
Q Consensus 26 ~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~~-~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~ 104 (331)
++.+.||.+++|...| ++++|||+||++++... ...+..+.++||+|+++|+||||.|+.+. ..++++++++|+.
T Consensus 2 ~~~~~~g~~l~y~~~G--~g~~vvllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~--~~~~~~~~a~d~~ 77 (271)
T 3ia2_A 2 TFVAKDGTQIYFKDWG--SGKPVLFSHGWLLDADMWEYQMEYLSSRGYRTIAFDRRGFGRSDQPW--TGNDYDTFADDIA 77 (271)
T ss_dssp EEECTTSCEEEEEEES--SSSEEEEECCTTCCGGGGHHHHHHHHTTTCEEEEECCTTSTTSCCCS--SCCSHHHHHHHHH
T ss_pred eEEcCCCCEEEEEccC--CCCeEEEECCCCCcHHHHHHHHHHHHhCCceEEEecCCCCccCCCCC--CCCCHHHHHHHHH
Confidence 5677899999999999 68899999998776554 44566676789999999999999998765 4678999999999
Q ss_pred HHHHHhCCCcEEEEEeChhHHHHHHHHHhC-CCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhh
Q 020064 105 KLRQHLEIPEWQVFGGSWGSTLALAYSLAH-PDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERS 183 (331)
Q Consensus 105 ~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~-p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (331)
++++.++.++++|+||||||.+++.+++.+ |++++++|++++........... ........+..+...... ...
T Consensus 78 ~~l~~l~~~~~~lvGhS~GG~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~-~~~ 152 (271)
T 3ia2_A 78 QLIEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDY----PQGVPLDVFARFKTELLK-DRA 152 (271)
T ss_dssp HHHHHHTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTB----TTSBCHHHHHHHHHHHHH-HHH
T ss_pred HHHHHhCCCCceEEEEcccHHHHHHHHHHhCCcccceEEEEccCCccccCCCCC----cccccHHHHHHHHHHHHh-hHH
Confidence 999999999999999999999777666655 89999999998754321100000 000000111111000000 000
Q ss_pred hhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhc-------CCccHHHHHHhhhhhhhhhccCCCCCcch
Q 020064 184 CFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKR-------GEDDIFSLAFARIENHYFLNKGFFPSDSF 256 (331)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (331)
.+...+.. .+.. .............. .............. ..+
T Consensus 153 ~~~~~~~~---------------~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~ 202 (271)
T 3ia2_A 153 QFISDFNA---------------PFYG---INKGQVVSQGVQTQTLQIALLASLKATVDCVTAFA------------ETD 202 (271)
T ss_dssp HHHHHHHH---------------HHHT---GGGTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHH------------HCB
T ss_pred HHHHHhhH---------------hhhc---cccccccCHHHHHHHHhhhhhccHHHHHHHHHHhh------------ccC
Confidence 00000000 0000 00000000000000 00000000000000 223
Q ss_pred hhhhccccccccEEEEecCCCCccCCcc-hHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHh
Q 020064 257 LLDNIDNIRHINATIVQGRYDVCCPMMS-AWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNL 326 (331)
Q Consensus 257 ~~~~l~~i~~~P~l~i~G~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 326 (331)
....+.++ ++|+|+|+|++|.++|++. .+.+.+.++++++++++++||+++.++ |+++++.|.+||++
T Consensus 203 ~~~~l~~i-~~P~Lvi~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~-p~~~~~~i~~Fl~~ 271 (271)
T 3ia2_A 203 FRPDMAKI-DVPTLVIHGDGDQIVPFETTGKVAAELIKGAELKVYKDAPHGFAVTH-AQQLNEDLLAFLKR 271 (271)
T ss_dssp CHHHHTTC-CSCEEEEEETTCSSSCGGGTHHHHHHHSTTCEEEEETTCCTTHHHHT-HHHHHHHHHHHHTC
T ss_pred CcccccCC-CCCEEEEEeCCCCcCChHHHHHHHHHhCCCceEEEEcCCCCcccccC-HHHHHHHHHHHhhC
Confidence 45567889 6999999999999999887 455667789999999999999999997 99999999999963
|
| >3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-38 Score=256.18 Aligned_cols=279 Identities=19% Similarity=0.283 Sum_probs=175.2
Q ss_pred CCCccceeEeCCCceEEEEeCCCC--C--CCcEEEeccCCCCCC-CCCcccccCC-CCcEEEEecCCCCCCCCCC--CCC
Q 020064 20 EPYSTGILKVSDIHTIYWEQSGNP--T--GHPVVFLHGGPGGGT-TPSNRRFFDP-DFYRIILFDQRGAGKSTPH--ACL 91 (331)
Q Consensus 20 ~~~~~~~~~~~~g~~l~~~~~g~~--~--~~~vl~~HG~~~~~~-~~~~~~~~~~-~g~~vi~~D~~G~G~s~~~--~~~ 91 (331)
.+.++.++.+++ .+++|...|++ + +++|||+||++++.. |+..+..+.. .+|+||++|+||||.|+.. ...
T Consensus 26 ~~~~~~~v~~~g-~~l~y~~~G~~~~~~~g~plvllHG~~~~~~~w~~~~~~l~~~~~~~Via~D~rG~G~S~~~~~~~~ 104 (330)
T 3nwo_A 26 MPVSSRTVPFGD-HETWVQVTTPENAQPHALPLIVLHGGPGMAHNYVANIAALADETGRTVIHYDQVGCGNSTHLPDAPA 104 (330)
T ss_dssp ---CEEEEEETT-EEEEEEEECCSSCCTTCCCEEEECCTTTCCSGGGGGGGGHHHHHTCCEEEECCTTSTTSCCCTTSCG
T ss_pred CcCcceeEeecC-cEEEEEEecCccCCCCCCcEEEECCCCCCchhHHHHHHHhccccCcEEEEECCCCCCCCCCCCCCcc
Confidence 345667788755 49999999963 3 448999999766644 5556666654 6999999999999999863 222
Q ss_pred CccchHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHH
Q 020064 92 DQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWE 171 (331)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (331)
..++.+++++|+.++++.++.++++|+||||||.+++.+|.++|++|.++|+++++......... ..
T Consensus 105 ~~~~~~~~a~dl~~ll~~lg~~~~~lvGhSmGG~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~-------------~~ 171 (330)
T 3nwo_A 105 DFWTPQLFVDEFHAVCTALGIERYHVLGQSWGGMLGAEIAVRQPSGLVSLAICNSPASMRLWSEA-------------AG 171 (330)
T ss_dssp GGCCHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHTCCTTEEEEEEESCCSBHHHHHHH-------------HH
T ss_pred ccccHHHHHHHHHHHHHHcCCCceEEEecCHHHHHHHHHHHhCCccceEEEEecCCcchHHHHHH-------------HH
Confidence 34789999999999999999999999999999999999999999999999999986543211000 00
Q ss_pred hhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhh--hhhh-----
Q 020064 172 SFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARI--ENHY----- 244 (331)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~----- 244 (331)
.....++......+......... ..... ......+... ........+.. +...+... ....
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~--~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~ 239 (330)
T 3nwo_A 172 DLRAQLPAETRAALDRHEAAGTI-THPDY-LQAAAEFYRR--HVCRVVPTPQD--------FADSVAQMEAEPTVYHTMN 239 (330)
T ss_dssp HHHHHSCHHHHHHHHHHHHHTCT-TSHHH-HHHHHHHHHH--HTCCSSSCCHH--------HHHHHHHHHHSCHHHHHHT
T ss_pred HHHHhcCHHHHHHHHHHHhccCC-CCHHH-HHHHHHHHHH--hhccccCCCHH--------HHHHHHhhccchhhhhccc
Confidence 00001111000000000000000 00000 0000111000 00000000000 00000000 0000
Q ss_pred ----hhccCCCCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHH
Q 020064 245 ----FLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATN 320 (331)
Q Consensus 245 ----~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i 320 (331)
+....... ..+..+.+.+| ++|+|+|+|++|.++| ...+.+.+.+|++++++++++||+++.|+ |+++.+.|
T Consensus 240 ~~~~~~~~~~~~-~~~~~~~l~~i-~~P~Lvi~G~~D~~~p-~~~~~~~~~ip~~~~~~i~~~gH~~~~e~-p~~~~~~i 315 (330)
T 3nwo_A 240 GPNEFHVVGTLG-DWSVIDRLPDV-TAPVLVIAGEHDEATP-KTWQPFVDHIPDVRSHVFPGTSHCTHLEK-PEEFRAVV 315 (330)
T ss_dssp CSCSSSCCSGGG-GCBCGGGGGGC-CSCEEEEEETTCSSCH-HHHHHHHHHCSSEEEEEETTCCTTHHHHS-HHHHHHHH
T ss_pred Cchhhhhhcccc-CCchhhhcccC-CCCeEEEeeCCCccCh-HHHHHHHHhCCCCcEEEeCCCCCchhhcC-HHHHHHHH
Confidence 00000001 23455678899 5999999999999887 46788999999999999999999999997 99999999
Q ss_pred HHHHHhhh
Q 020064 321 EKLKNLIK 328 (331)
Q Consensus 321 ~~fl~~~~ 328 (331)
.+||++..
T Consensus 316 ~~FL~~~~ 323 (330)
T 3nwo_A 316 AQFLHQHD 323 (330)
T ss_dssp HHHHHHHH
T ss_pred HHHHHhcc
Confidence 99998753
|
| >1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-37 Score=245.30 Aligned_cols=280 Identities=15% Similarity=0.180 Sum_probs=172.7
Q ss_pred cceeEeCCCceEEEEeCCCCCCCcEEEeccCCCCCCCCC-cc-cccCCCCcEEEEecCCCCCCCCCCC-CCCccchHHHH
Q 020064 24 TGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPS-NR-RFFDPDFYRIILFDQRGAGKSTPHA-CLDQNTTWDLI 100 (331)
Q Consensus 24 ~~~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~~~~-~~-~~~~~~g~~vi~~D~~G~G~s~~~~-~~~~~~~~~~~ 100 (331)
..+++. +|.+++|...|++++|+|||+||++++...|. .+ ..+.+.||+||++|+||||.|+... ....+++++++
T Consensus 3 ~~~~~~-~g~~l~y~~~G~~~~~~vvllHG~~~~~~~w~~~~~~~L~~~G~~vi~~D~rG~G~S~~~~~~~~~~~~~~~a 81 (298)
T 1q0r_A 3 ERIVPS-GDVELWSDDFGDPADPALLLVMGGNLSALGWPDEFARRLADGGLHVIRYDHRDTGRSTTRDFAAHPYGFGELA 81 (298)
T ss_dssp EEEEEE-TTEEEEEEEESCTTSCEEEEECCTTCCGGGSCHHHHHHHHTTTCEEEEECCTTSTTSCCCCTTTSCCCHHHHH
T ss_pred Cceecc-CCeEEEEEeccCCCCCeEEEEcCCCCCccchHHHHHHHHHhCCCEEEeeCCCCCCCCCCCCCCcCCcCHHHHH
Confidence 345554 66799999999767899999999877765554 34 6777788999999999999998611 12458999999
Q ss_pred HHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchh-hhh--hhHhhcccccCChhhHHhhhccC
Q 020064 101 DDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRK-KEI--DWFYEGGAAAIYPDAWESFRDLI 177 (331)
Q Consensus 101 ~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~ 177 (331)
+|+.++++.++.++++|+||||||.+++.+|.++|++|+++|++++..... ... ...... .. + ....
T Consensus 82 ~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~--~~-----~---~~~~ 151 (298)
T 1q0r_A 82 ADAVAVLDGWGVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDANIERVMRG--EP-----T---LDGL 151 (298)
T ss_dssp HHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCTTCCHHHHHHHHHHT--CC-----C---SSCS
T ss_pred HHHHHHHHHhCCCceEEEEeCcHHHHHHHHHHhCchhhheeEEecccCCCcccccchhhhhhh--hh-----h---hccc
Confidence 999999999999999999999999999999999999999999999865211 000 000000 00 0 0000
Q ss_pred CcchhhhhHHhhcccc-CCCchHHHHHHHHHhhhHHHhhh-cCCCChhhhhcCCccHHHHHHhhh-h-hhh-hhccCCCC
Q 020064 178 PENERSCFVDAYSKRL-NSDDKETQYAAARAWTKWEMMTA-HLLPNEENIKRGEDDIFSLAFARI-E-NHY-FLNKGFFP 252 (331)
Q Consensus 178 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~-~~~~~~~~ 252 (331)
..... ..+..+.... .............. .+..... ....+++..... ....+... . ... ..... ..
T Consensus 152 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~-~~ 223 (298)
T 1q0r_A 152 PGPQQ-PFLDALALMNQPAEGRAAEVAKRVS--KWRILSGTGVPFDDAEYARW----EERAIDHAGGVLAEPYAHYS-LT 223 (298)
T ss_dssp CCCCH-HHHHHHHHHHSCCCSHHHHHHHHHH--HHHHHHCSSSCCCHHHHHHH----HHHHHHHTTTCCSCCCGGGG-CC
T ss_pred ccccH-HHHHHHhccCcccccHHHHHHHHHH--hhhhccCCCCCCCHHHHHHH----HHHHhhccCCccchhhhhhh-hh
Confidence 00000 0000000000 00000000000000 0000000 000111111100 00000000 0 000 00000 11
Q ss_pred Ccchhhhh-ccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhhh
Q 020064 253 SDSFLLDN-IDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNLIK 328 (331)
Q Consensus 253 ~~~~~~~~-l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~ 328 (331)
...+.... +.++ ++|+|+|+|++|.++|++.++.+.+.+|++++++++++|| +. |+++.+.|.+|+++..
T Consensus 224 ~~~~~~~~~l~~i-~~P~Lvi~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~~gH----e~-p~~~~~~i~~fl~~~~ 294 (298)
T 1q0r_A 224 LPPPSRAAELREV-TVPTLVIQAEHDPIAPAPHGKHLAGLIPTARLAEIPGMGH----AL-PSSVHGPLAEVILAHT 294 (298)
T ss_dssp CCCGGGGGGGGGC-CSCEEEEEETTCSSSCTTHHHHHHHTSTTEEEEEETTCCS----SC-CGGGHHHHHHHHHHHH
T ss_pred cCccccccccccc-CCCEEEEEeCCCccCCHHHHHHHHHhCCCCEEEEcCCCCC----CC-cHHHHHHHHHHHHHHh
Confidence 12345556 8899 5999999999999999999999999999999999999999 54 8899999999998653
|
| >1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-38 Score=247.93 Aligned_cols=267 Identities=19% Similarity=0.234 Sum_probs=169.5
Q ss_pred eeEeCCCceEEEEeCCCCCCCcEEEeccCCCCCC-CCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHH
Q 020064 26 ILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGT-TPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIE 104 (331)
Q Consensus 26 ~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~-~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~ 104 (331)
++++.+|.+++|...|++++++|||+||++++.. |...+..+.++||+|+++|+||||.|..+. ..++++++++|+.
T Consensus 2 ~~~~~~g~~l~y~~~g~~~~~~vvllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~--~~~~~~~~~~dl~ 79 (275)
T 1a88_A 2 TVTTSDGTNIFYKDWGPRDGLPVVFHHGWPLSADDWDNQMLFFLSHGYRVIAHDRRGHGRSDQPS--TGHDMDTYAADVA 79 (275)
T ss_dssp EEECTTSCEEEEEEESCTTSCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCS--SCCSHHHHHHHHH
T ss_pred eEEccCCCEEEEEEcCCCCCceEEEECCCCCchhhHHHHHHHHHHCCceEEEEcCCcCCCCCCCC--CCCCHHHHHHHHH
Confidence 4677889899999999767889999999876654 444556666789999999999999998654 4689999999999
Q ss_pred HHHHHhCCCcEEEEEeChhHHHHHHHHHhC-CCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhh
Q 020064 105 KLRQHLEIPEWQVFGGSWGSTLALAYSLAH-PDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERS 183 (331)
Q Consensus 105 ~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~-p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (331)
++++.++.++++++||||||.+++.+++++ |++|+++|++++.......... .........+..+...... ...
T Consensus 80 ~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~-~~~ 154 (275)
T 1a88_A 80 ALTEALDLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDT----NPDGLPLEVFDEFRAALAA-NRA 154 (275)
T ss_dssp HHHHHHTCCSEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCCCSCCBCBTT----BTTSBCHHHHHHHHHHHHH-CHH
T ss_pred HHHHHcCCCceEEEEeccchHHHHHHHHHhCchheEEEEEecCCCcccccCcc----CcccCCHHHHHHHHHHHhh-hHH
Confidence 999999999999999999999999988887 9999999999975422100000 0000000001000000000 000
Q ss_pred hhHHhhcc-ccCC---CchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhh
Q 020064 184 CFVDAYSK-RLNS---DDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLD 259 (331)
Q Consensus 184 ~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (331)
.+...+.. .+.. ............+.... . .. ............ . ..+..+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----------~~-~~~~~~~~~~~~-----~-------~~~~~~ 209 (275)
T 1a88_A 155 QFYIDVPSGPFYGFNREGATVSQGLIDHWWLQG-M-----------MG-AANAHYECIAAF-----S-------ETDFTD 209 (275)
T ss_dssp HHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHH-H-----------HS-CHHHHHHHHHHH-----H-------HCCCHH
T ss_pred HHHHhhhccccccccCcccccCHHHHHHHHHHh-h-----------hc-chHhHHHHHhhh-----h-------hccccc
Confidence 00000000 0000 00000000000000000 0 00 000000000000 0 122345
Q ss_pred hccccccccEEEEecCCCCccCCc-chHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHh
Q 020064 260 NIDNIRHINATIVQGRYDVCCPMM-SAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNL 326 (331)
Q Consensus 260 ~l~~i~~~P~l~i~G~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 326 (331)
.+.++ ++|+|+|+|++|.++|++ ..+.+.+.++++++++++++||+++.++ |+++.+.|.+|+++
T Consensus 210 ~l~~i-~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~-p~~~~~~i~~fl~~ 275 (275)
T 1a88_A 210 DLKRI-DVPVLVAHGTDDQVVPYADAAPKSAELLANATLKSYEGLPHGMLSTH-PEVLNPDLLAFVKS 275 (275)
T ss_dssp HHHHC-CSCEEEEEETTCSSSCSTTTHHHHHHHSTTEEEEEETTCCTTHHHHC-HHHHHHHHHHHHHC
T ss_pred ccccC-CCCEEEEecCCCccCCcHHHHHHHHhhCCCcEEEEcCCCCccHHHhC-HHHHHHHHHHHhhC
Confidence 67788 599999999999999987 4566777889999999999999999986 99999999999963
|
| >1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-37 Score=243.59 Aligned_cols=283 Identities=19% Similarity=0.204 Sum_probs=174.6
Q ss_pred CccceeEeCCCceEEEEeCCCCCC-CcEEEeccCCCC-CCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHH
Q 020064 22 YSTGILKVSDIHTIYWEQSGNPTG-HPVVFLHGGPGG-GTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDL 99 (331)
Q Consensus 22 ~~~~~~~~~~g~~l~~~~~g~~~~-~~vl~~HG~~~~-~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~ 99 (331)
.++.+++++ |.+++|...|++++ ++|||+||++++ ..++.....++++||+|+++|+||||.|+.+. ...++++++
T Consensus 5 ~~~~~~~~~-g~~l~~~~~g~~~~~~~vvllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~-~~~~~~~~~ 82 (293)
T 1mtz_A 5 CIENYAKVN-GIYIYYKLCKAPEEKAKLMTMHGGPGMSHDYLLSLRDMTKEGITVLFYDQFGCGRSEEPD-QSKFTIDYG 82 (293)
T ss_dssp CEEEEEEET-TEEEEEEEECCSSCSEEEEEECCTTTCCSGGGGGGGGGGGGTEEEEEECCTTSTTSCCCC-GGGCSHHHH
T ss_pred hcceEEEEC-CEEEEEEEECCCCCCCeEEEEeCCCCcchhHHHHHHHHHhcCcEEEEecCCCCccCCCCC-CCcccHHHH
Confidence 345667765 55999999986434 789999997554 45566666677789999999999999998765 234789999
Q ss_pred HHHHHHHHHHh-CCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCC
Q 020064 100 IDDIEKLRQHL-EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIP 178 (331)
Q Consensus 100 ~~~~~~~~~~~-~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (331)
++|+.++++.+ +.++++|+||||||.+++.+|.++|++|+++|++++........... ......++
T Consensus 83 ~~dl~~~~~~l~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~-------------~~~~~~~~ 149 (293)
T 1mtz_A 83 VEEAEALRSKLFGNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSVPLTVKEM-------------NRLIDELP 149 (293)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBHHHHHHHH-------------HHHHHTSC
T ss_pred HHHHHHHHHHhcCCCcEEEEEecHHHHHHHHHHHhCchhhheEEecCCccChHHHHHHH-------------HHHHHhcC
Confidence 99999999999 99999999999999999999999999999999999876532110000 00000011
Q ss_pred cchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHH-HHHhhh-hhhhhhccCCCCCcch
Q 020064 179 ENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFS-LAFARI-ENHYFLNKGFFPSDSF 256 (331)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~ 256 (331)
......+......... ..... ......+... ........+..+......... ..+... ....+....... ..+
T Consensus 150 ~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 224 (293)
T 1mtz_A 150 AKYRDAIKKYGSSGSY-ENPEY-QEAVNYFYHQ--HLLRSEDWPPEVLKSLEYAERRNVYRIMNGPNEFTITGTIK-DWD 224 (293)
T ss_dssp HHHHHHHHHHHHHTCT-TCHHH-HHHHHHHHHH--HTSCSSCCCHHHHHHHHHHHHSSHHHHHTCSBTTBCCSTTT-TCB
T ss_pred HHHHHHHHHhhccCCc-ChHHH-HHHHHHHHHh--hcccccCchHHHHHhHhhhccchhhhhccCcceeccccccc-CCC
Confidence 0000000000000000 00000 0000000000 000000000000000000000 000000 000000001111 234
Q ss_pred hhhhccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhh
Q 020064 257 LLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNLI 327 (331)
Q Consensus 257 ~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 327 (331)
..+.+.++ ++|+|+|+|++| .++++.++.+.+.+|++++++++++||+++.++ |+++.+.|.+|+++.
T Consensus 225 ~~~~l~~i-~~P~lii~G~~D-~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~-p~~~~~~i~~fl~~~ 292 (293)
T 1mtz_A 225 ITDKISAI-KIPTLITVGEYD-EVTPNVARVIHEKIAGSELHVFRDCSHLTMWED-REGYNKLLSDFILKH 292 (293)
T ss_dssp CTTTGGGC-CSCEEEEEETTC-SSCHHHHHHHHHHSTTCEEEEETTCCSCHHHHS-HHHHHHHHHHHHHTC
T ss_pred hhhhhccC-CCCEEEEeeCCC-CCCHHHHHHHHHhCCCceEEEeCCCCCCccccC-HHHHHHHHHHHHHhc
Confidence 45678889 599999999999 667788899999999999999999999999997 999999999999764
|
| >1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-37 Score=244.50 Aligned_cols=264 Identities=20% Similarity=0.252 Sum_probs=167.3
Q ss_pred eeEeCCCceEEEEeCCCCCCCcEEEeccCCCCCCC-CCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHH
Q 020064 26 ILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTT-PSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIE 104 (331)
Q Consensus 26 ~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~~-~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~ 104 (331)
++++.+|.+++|...| ++++|||+||++++... ...+..+.+.||+|+++|+||||.|..+. ..++++++++|+.
T Consensus 2 ~~~~~~g~~l~y~~~g--~g~~vvllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~--~~~~~~~~~~dl~ 77 (274)
T 1a8q_A 2 ICTTRDGVEIFYKDWG--QGRPVVFIHGWPLNGDAWQDQLKAVVDAGYRGIAHDRRGHGHSTPVW--DGYDFDTFADDLN 77 (274)
T ss_dssp EEECTTSCEEEEEEEC--SSSEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCS--SCCSHHHHHHHHH
T ss_pred eEEccCCCEEEEEecC--CCceEEEECCCcchHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCC--CCCcHHHHHHHHH
Confidence 5677888899999988 67899999998766544 44556666689999999999999998654 4689999999999
Q ss_pred HHHHHhCCCcEEEEEeChhHHHHHHHHHhC-CCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhh
Q 020064 105 KLRQHLEIPEWQVFGGSWGSTLALAYSLAH-PDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERS 183 (331)
Q Consensus 105 ~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~-p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (331)
++++.++.++++|+||||||.+++.+++++ |++|+++|++++.......... .........+..+...... ...
T Consensus 78 ~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~-~~~ 152 (274)
T 1a8q_A 78 DLLTDLDLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDK----NPDGVPDEVFDALKNGVLT-ERS 152 (274)
T ss_dssp HHHHHTTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSS----CTTSBCHHHHHHHHHHHHH-HHH
T ss_pred HHHHHcCCCceEEEEeCccHHHHHHHHHHhhhHheeeeeEecCCCcccccccc----CcccchHHHHHHHHHHhhc-cHH
Confidence 999999999999999999999999988776 9999999999975421100000 0000000011110000000 000
Q ss_pred hhHHhhccccCC-C--chHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhh
Q 020064 184 CFVDAYSKRLNS-D--DKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDN 260 (331)
Q Consensus 184 ~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (331)
.+...+...+.. . ...........+.. ....... ........... ..+..+.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~--------~~~~~~~~~~~------------~~~~~~~ 207 (274)
T 1a8q_A 153 QFWKDTAEGFFSANRPGNKVTQGNKDAFWY-----MAMAQTI--------EGGVRCVDAFG------------YTDFTED 207 (274)
T ss_dssp HHHHHHHHHHTTTTSTTCCCCHHHHHHHHH-----HHTTSCH--------HHHHHHHHHHH------------HCCCHHH
T ss_pred HHHHHhcccccccccccccccHHHHHHHHH-----HhhhcCh--------HHHHHHHhhhh------------cCcHHHH
Confidence 000000000000 0 00000000000000 0000000 00000000000 1233456
Q ss_pred ccccccccEEEEecCCCCccCCc-chHHHHHhCCCCcEEEecCCCCCCCcC--CchhHHHHHHHHHHH
Q 020064 261 IDNIRHINATIVQGRYDVCCPMM-SAWDLHKAWPEADFKVVADAGHSANEP--GIAAELVATNEKLKN 325 (331)
Q Consensus 261 l~~i~~~P~l~i~G~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~--~~~~~~~~~i~~fl~ 325 (331)
+.++ ++|+|+|+|++|.++|++ ..+.+.+.+|++++++++++||+++.+ + |+++.+.|.+|++
T Consensus 208 l~~i-~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~~~-p~~~~~~i~~fl~ 273 (274)
T 1a8q_A 208 LKKF-DIPTLVVHGDDDQVVPIDATGRKSAQIIPNAELKVYEGSSHGIAMVPGD-KEKFNRDLLEFLN 273 (274)
T ss_dssp HTTC-CSCEEEEEETTCSSSCGGGTHHHHHHHSTTCEEEEETTCCTTTTTSTTH-HHHHHHHHHHHHT
T ss_pred hhcC-CCCEEEEecCcCCCCCcHHHHHHHHhhCCCceEEEECCCCCceecccCC-HHHHHHHHHHHhc
Confidence 7889 599999999999999987 456677788999999999999999988 6 9999999999985
|
| >3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-38 Score=250.26 Aligned_cols=271 Identities=18% Similarity=0.231 Sum_probs=177.5
Q ss_pred CCccceeEeCCCceEEEEeCCCCCCCcEEEeccCCCCCCC-CCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHH
Q 020064 21 PYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTT-PSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDL 99 (331)
Q Consensus 21 ~~~~~~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~~-~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~ 99 (331)
.+++++++++++ +++|...| ++|+|||+||++++... ..+...+ .+||+|+++|+||||.|........++++++
T Consensus 2 ~~~~~~~~~~~~-~~~y~~~g--~~~~vv~~HG~~~~~~~~~~~~~~L-~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~ 77 (278)
T 3oos_A 2 MWTTNIIKTPRG-KFEYFLKG--EGPPLCVTHLYSEYNDNGNTFANPF-TDHYSVYLVNLKGCGNSDSAKNDSEYSMTET 77 (278)
T ss_dssp CCEEEEEEETTE-EEEEEEEC--SSSEEEECCSSEECCTTCCTTTGGG-GGTSEEEEECCTTSTTSCCCSSGGGGSHHHH
T ss_pred ccccCcEecCCc-eEEEEecC--CCCeEEEEcCCCcchHHHHHHHHHh-hcCceEEEEcCCCCCCCCCCCCcccCcHHHH
Confidence 356778888777 99999988 68899999997766544 4444444 4599999999999999987754456889999
Q ss_pred HHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCc
Q 020064 100 IDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPE 179 (331)
Q Consensus 100 ~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (331)
++|+.++++.++.++++++|||+||.+++.+|.++|++++++|++++.......................
T Consensus 78 ~~~~~~~~~~l~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 147 (278)
T 3oos_A 78 IKDLEAIREALYINKWGFAGHSAGGMLALVYATEAQESLTKIIVGGAAASKEYASHKDSIYCSKNVKFNR---------- 147 (278)
T ss_dssp HHHHHHHHHHTTCSCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBGGGGGSTTSTTSTTSTTHHH----------
T ss_pred HHHHHHHHHHhCCCeEEEEeecccHHHHHHHHHhCchhhCeEEEecCccccccccccchhhhhhchhHHH----------
Confidence 9999999999999999999999999999999999999999999999977622110000000000000000
Q ss_pred chhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCc-----cHHHHHHhhhhhhhhhccCCCCCc
Q 020064 180 NERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGED-----DIFSLAFARIENHYFLNKGFFPSD 254 (331)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 254 (331)
.......+..... ...........+.... ...++....... ......+... .. .. ...
T Consensus 148 --~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-~~-~~~ 210 (278)
T 3oos_A 148 --IVSIMNALNDDST--VQEERKALSREWALMS------FYSEEKLEEALKLPNSGKTVGNRLNYF-----RQ-VE-YKD 210 (278)
T ss_dssp --HHHHHHHHTCTTS--CHHHHHHHHHHHHHHH------CSCHHHHHHHTTSCCCCEECHHHHHHH-----HH-TT-GGG
T ss_pred --HHHHHHhhccccc--CchHHHHHHHHHhhcc------cCCcHHHHHHhhccccchhHHHHHHHh-----hh-cc-ccc
Confidence 0011111111000 1111111111111000 001111100000 0000000000 00 00 003
Q ss_pred chhhhhccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHH
Q 020064 255 SFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLK 324 (331)
Q Consensus 255 ~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl 324 (331)
.+....+.++ ++|+|+++|++|.++|++.++.+.+.++++++++++++||+++.++ |+++.+.|.+||
T Consensus 211 ~~~~~~~~~i-~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~-p~~~~~~i~~fl 278 (278)
T 3oos_A 211 YDVRQKLKFV-KIPSFIYCGKHDVQCPYIFSCEIANLIPNATLTKFEESNHNPFVEE-IDKFNQFVNDTL 278 (278)
T ss_dssp CBCHHHHTTC-CSCEEEEEETTCSSSCHHHHHHHHHHSTTEEEEEETTCSSCHHHHS-HHHHHHHHHHTC
T ss_pred ccHHHHHhCC-CCCEEEEEeccCCCCCHHHHHHHHhhCCCcEEEEcCCcCCCccccc-HHHHHHHHHhhC
Confidence 3455678889 5999999999999999999999999999999999999999999997 999999999885
|
| >3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} SCOP: c.69.1.8 PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 4fwb_A 1cqw_A 3sk0_A 2v9z_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-37 Score=247.26 Aligned_cols=284 Identities=15% Similarity=0.150 Sum_probs=182.0
Q ss_pred CCCCccceeEeCCCceEEEEeCCCCCCCcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHH
Q 020064 19 VEPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWD 98 (331)
Q Consensus 19 ~~~~~~~~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~ 98 (331)
..+.+.++++++ |.+++|...|++++|+|||+||++++...|......+.+||+|+++|+||||.|.... ..+++++
T Consensus 7 ~~~~~~~~~~~~-g~~l~~~~~g~~~~~~vl~lHG~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~--~~~~~~~ 83 (299)
T 3g9x_A 7 GFPFDPHYVEVL-GERMHYVDVGPRDGTPVLFLHGNPTSSYLWRNIIPHVAPSHRCIAPDLIGMGKSDKPD--LDYFFDD 83 (299)
T ss_dssp CCCCCCEEEEET-TEEEEEEEESCSSSCCEEEECCTTCCGGGGTTTHHHHTTTSCEEEECCTTSTTSCCCC--CCCCHHH
T ss_pred CcccceeeeeeC-CeEEEEEecCCCCCCEEEEECCCCccHHHHHHHHHHHccCCEEEeeCCCCCCCCCCCC--CcccHHH
Confidence 345667788885 5599999999877999999999877655444333334679999999999999999776 3789999
Q ss_pred HHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccC-
Q 020064 99 LIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLI- 177 (331)
Q Consensus 99 ~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 177 (331)
+++|+.++++.++.++++++|||+||.+++.+|.++|++++++|++++.........+ .......+..+....
T Consensus 84 ~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~ 157 (299)
T 3g9x_A 84 HVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPFPTWDEW------PEFARETFQAFRTADV 157 (299)
T ss_dssp HHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHHHHHSGGGEEEEEEEEECCCBSSGGGS------CGGGHHHHHHHTSSSH
T ss_pred HHHHHHHHHHHhCCCcEEEEEeCccHHHHHHHHHhcchheeEEEEecCCcchhhhhhc------chHHHHHHHHHcCCCc
Confidence 9999999999999999999999999999999999999999999999955443211000 000000000000000
Q ss_pred Cc---chhhhhHHhhccccCCC--chHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCC
Q 020064 178 PE---NERSCFVDAYSKRLNSD--DKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFP 252 (331)
Q Consensus 178 ~~---~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (331)
.. .....+...+....... ...........+.. +.. .................. ....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~-----~~~~~~~~~~~~~~~~~~-~~~~ 220 (299)
T 3g9x_A 158 GRELIIDQNAFIEGALPKCVVRPLTEVEMDHYREPFLK-----------PVD-----REPLWRFPNELPIAGEPA-NIVA 220 (299)
T ss_dssp HHHHHTTSCHHHHTHHHHTCSSCCCHHHHHHHHGGGSS-----------GGG-----GHHHHHHHHHSCBTTBSH-HHHH
T ss_pred chhhhccchhhHHHhhhhhhccCCCHHHHHHHHHHhcc-----------ccc-----cchhhhhhhhhhhccccc-hhhh
Confidence 00 00001111111111111 11111110000000 000 000000000000000000 0000
Q ss_pred CcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhhhcC
Q 020064 253 SDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNLIKNG 330 (331)
Q Consensus 253 ~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~~~ 330 (331)
...+....+.++ ++|+|+|+|++|.++|++.++.+.+.+|++++++++++||+++.++ |+++.+.|.+|+.+..+.
T Consensus 221 ~~~~~~~~l~~i-~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~-p~~~~~~i~~~~~~~~~~ 296 (299)
T 3g9x_A 221 LVEAYMNWLHQS-PVPKLLFWGTPGVLIPPAEAARLAESLPNCKTVDIGPGLHYLQEDN-PDLIGSEIARWLPALHHH 296 (299)
T ss_dssp HHHHHHHHHHHC-CSCEEEEEEEECSSSCHHHHHHHHHHSTTEEEEEEEEESSCHHHHC-HHHHHHHHHHHSGGGCCC
T ss_pred hhhhhhhhcccC-CCCeEEEecCCCCCCCHHHHHHHHhhCCCCeEEEeCCCCCcchhcC-HHHHHHHHHHHHhhhhhc
Confidence 012344567888 5999999999999999999999999999999999999999999997 999999999999887653
|
| >1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-38 Score=249.40 Aligned_cols=266 Identities=19% Similarity=0.219 Sum_probs=168.7
Q ss_pred eCCCceEEEEeCCCCCCCcEEEeccCCCCCC-CCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHH
Q 020064 29 VSDIHTIYWEQSGNPTGHPVVFLHGGPGGGT-TPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLR 107 (331)
Q Consensus 29 ~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~-~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~ 107 (331)
..+|.+++|...| ++++|||+||++++.. |...+..+.++||+|+++|+||||.|+.+. ..++++++++|+.+++
T Consensus 9 ~~~g~~l~y~~~g--~g~pvvllHG~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~--~~~~~~~~a~dl~~~l 84 (277)
T 1brt_A 9 NSTSIDLYYEDHG--TGQPVVLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGFGQSSQPT--TGYDYDTFAADLNTVL 84 (277)
T ss_dssp TTEEEEEEEEEEC--SSSEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCS--SCCSHHHHHHHHHHHH
T ss_pred cCCCcEEEEEEcC--CCCeEEEECCCCCcHHHHHHHHHHHhhCCCEEEEeCCCCCCCCCCCC--CCccHHHHHHHHHHHH
Confidence 3467799999988 5778999999877654 444556666679999999999999998765 4689999999999999
Q ss_pred HHhCCCcEEEEEeChhHHHHHHHHHhCCC-ceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhH
Q 020064 108 QHLEIPEWQVFGGSWGSTLALAYSLAHPD-KVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFV 186 (331)
Q Consensus 108 ~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~-~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (331)
+.++.++++|+||||||.+++.+|.++|+ +|+++|++++.......... ..........+..+....... .....
T Consensus 85 ~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~-~~~~~ 160 (277)
T 1brt_A 85 ETLDLQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDD---NPDGAAPQEFFDGIVAAVKAD-RYAFY 160 (277)
T ss_dssp HHHTCCSEEEEEEGGGHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTT---BTTCSBCHHHHHHHHHHHHHC-HHHHH
T ss_pred HHhCCCceEEEEECccHHHHHHHHHHcCcceEEEEEEecCcCcccccccc---CccccccHHHHHHHHHHHhcC-chhhH
Confidence 99999999999999999999999999999 99999999974321100000 000000000010000000000 00000
Q ss_pred HhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhcccccc
Q 020064 187 DAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRH 266 (331)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 266 (331)
..+. ..+.... ........++..... +.................. ..+..+.+.++ +
T Consensus 161 ~~~~---------------~~~~~~~-~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~i-~ 217 (277)
T 1brt_A 161 TGFF---------------NDFYNLD-ENLGTRISEEAVRNS----WNTAASGGFFAAAAAPTTW--YTDFRADIPRI-D 217 (277)
T ss_dssp HHHH---------------HHHTTHH-HHBTTTBCHHHHHHH----HHHHHHSCHHHHHHGGGGT--TCCCTTTGGGC-C
T ss_pred HHHH---------------HHHhhcc-ccccccCCHHHHHHH----HHHHhccchHHHHHHHHHH--hccchhhcccC-C
Confidence 0000 0000000 000000001100000 0000000000000000000 12334567889 5
Q ss_pred ccEEEEecCCCCccCCcch-HHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHh
Q 020064 267 INATIVQGRYDVCCPMMSA-WDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNL 326 (331)
Q Consensus 267 ~P~l~i~G~~D~~~~~~~~-~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 326 (331)
+|+|+|+|++|.++|++.+ +.+.+.+|++++++++++||+++.++ |+++.+.|.+|+++
T Consensus 218 ~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~-p~~~~~~i~~fl~~ 277 (277)
T 1brt_A 218 VPALILHGTGDRTLPIENTARVFHKALPSAEYVEVEGAPHGLLWTH-AEEVNTALLAFLAK 277 (277)
T ss_dssp SCEEEEEETTCSSSCGGGTHHHHHHHCTTSEEEEETTCCTTHHHHT-HHHHHHHHHHHHHC
T ss_pred CCeEEEecCCCccCChHHHHHHHHHHCCCCcEEEeCCCCcchhhhC-HHHHHHHHHHHHhC
Confidence 9999999999999999888 99999999999999999999999996 99999999999963
|
| >2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-37 Score=244.40 Aligned_cols=268 Identities=18% Similarity=0.207 Sum_probs=168.6
Q ss_pred eeEeCCC-ceEEEEeCCCCCCCcEEEeccCC---CCC-CCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHH
Q 020064 26 ILKVSDI-HTIYWEQSGNPTGHPVVFLHGGP---GGG-TTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLI 100 (331)
Q Consensus 26 ~~~~~~g-~~l~~~~~g~~~~~~vl~~HG~~---~~~-~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~ 100 (331)
++++ +| .+++|...|+...|+|||+||++ ++. .|...+..+ .++|+||++|+||||.|+.+.. ..+++++++
T Consensus 17 ~~~~-~g~~~l~y~~~G~g~~~~vvllHG~~pg~~~~~~w~~~~~~L-~~~~~via~Dl~G~G~S~~~~~-~~~~~~~~a 93 (291)
T 2wue_A 17 EVDV-DGPLKLHYHEAGVGNDQTVVLLHGGGPGAASWTNFSRNIAVL-ARHFHVLAVDQPGYGHSDKRAE-HGQFNRYAA 93 (291)
T ss_dssp EEES-SSEEEEEEEEECTTCSSEEEEECCCCTTCCHHHHTTTTHHHH-TTTSEEEEECCTTSTTSCCCSC-CSSHHHHHH
T ss_pred EEEe-CCcEEEEEEecCCCCCCcEEEECCCCCccchHHHHHHHHHHH-HhcCEEEEECCCCCCCCCCCCC-CCcCHHHHH
Confidence 4555 56 69999999853334999999975 433 344555555 4569999999999999987652 268999999
Q ss_pred HHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcc
Q 020064 101 DDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPEN 180 (331)
Q Consensus 101 ~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (331)
+|+.++++.++.++++|+||||||.+++.+|.++|++|+++|++++........ ..................
T Consensus 94 ~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~ 165 (291)
T 2wue_A 94 MALKGLFDQLGLGRVPLVGNALGGGTAVRFALDYPARAGRLVLMGPGGLSINLF--------APDPTEGVKRLSKFSVAP 165 (291)
T ss_dssp HHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCSSSCCCSS--------SCSSCHHHHHHHHHHHSC
T ss_pred HHHHHHHHHhCCCCeEEEEEChhHHHHHHHHHhChHhhcEEEEECCCCCCcccc--------ccccchhhHHHHHHhccC
Confidence 999999999999999999999999999999999999999999999865321000 000000000000000000
Q ss_pred hhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhh
Q 020064 181 ERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDN 260 (331)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (331)
.. .....+...+................ ... ..+.. +...+... .. +..... . .....+.
T Consensus 166 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-----~~~~~--------~~~~~~~~-~~-~~~~~~-~-~~~~~~~ 225 (291)
T 2wue_A 166 TR-ENLEAFLRVMVYDKNLITPELVDQRF--ALA-----STPES--------LTATRAMG-KS-FAGADF-E-AGMMWRE 225 (291)
T ss_dssp CH-HHHHHHHHTSCSSGGGSCHHHHHHHH--HHH-----TSHHH--------HHHHHHHH-HH-HTSTTG-G-GGCGGGT
T ss_pred CH-HHHHHHHHHhccCcccCCHHHHHHHH--HHh-----cCchH--------HHHHHHHH-hh-cccccc-c-cchhHHH
Confidence 00 00111111111000000000000000 000 00100 00000000 00 000000 0 1122256
Q ss_pred ccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHh
Q 020064 261 IDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNL 326 (331)
Q Consensus 261 l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 326 (331)
+.++ ++|+|+|+|++|.++|++.++.+.+.+|++++++++++||+++.++ |+++.+.|.+|+++
T Consensus 226 l~~i-~~P~lvi~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e~-p~~~~~~i~~fl~~ 289 (291)
T 2wue_A 226 VYRL-RQPVLLIWGREDRVNPLDGALVALKTIPRAQLHVFGQCGHWVQVEK-FDEFNKLTIEFLGG 289 (291)
T ss_dssp GGGC-CSCEEEEEETTCSSSCGGGGHHHHHHSTTEEEEEESSCCSCHHHHT-HHHHHHHHHHHTTC
T ss_pred HhhC-CCCeEEEecCCCCCCCHHHHHHHHHHCCCCeEEEeCCCCCChhhhC-HHHHHHHHHHHHhc
Confidence 7889 5999999999999999999999999999999999999999999997 99999999999964
|
| >2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-37 Score=241.54 Aligned_cols=247 Identities=19% Similarity=0.232 Sum_probs=167.3
Q ss_pred ccceeEeCCCceEEEEeCCCCCCCcEEEeccCCCC-C-CCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccc---hH
Q 020064 23 STGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGG-G-TTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNT---TW 97 (331)
Q Consensus 23 ~~~~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~-~-~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~---~~ 97 (331)
++.+++. +|.+++|...|+ ..++|||+||++++ . .|...+..+.+.||+|+++|+||||.|..+. ..++ +.
T Consensus 3 ~~~~~~~-~g~~l~~~~~g~-~~~~vvllHG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~--~~~~~~~~~ 78 (254)
T 2ocg_A 3 TSAKVAV-NGVQLHYQQTGE-GDHAVLLLPGMLGSGETDFGPQLKNLNKKLFTVVAWDPRGYGHSRPPD--RDFPADFFE 78 (254)
T ss_dssp EEEEEEE-TTEEEEEEEEEC-CSEEEEEECCTTCCHHHHCHHHHHHSCTTTEEEEEECCTTSTTCCSSC--CCCCTTHHH
T ss_pred ceeEEEE-CCEEEEEEEecC-CCCeEEEECCCCCCCccchHHHHHHHhhCCCeEEEECCCCCCCCCCCC--CCCChHHHH
Confidence 4456666 556999999885 34589999997766 3 3566777777788999999999999998654 2345 67
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccC
Q 020064 98 DLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLI 177 (331)
Q Consensus 98 ~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (331)
+.++|+.++++.++.++++++||||||.+++.+|.++|++|+++|++++............. ... ..
T Consensus 79 ~~~~~~~~~l~~l~~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~------------~~~-~~ 145 (254)
T 2ocg_A 79 RDAKDAVDLMKALKFKKVSLLGWSDGGITALIAAAKYPSYIHKMVIWGANAYVTDEDSMIYE------------GIR-DV 145 (254)
T ss_dssp HHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCHHHHHHHH------------TTS-CG
T ss_pred HHHHHHHHHHHHhCCCCEEEEEECHhHHHHHHHHHHChHHhhheeEeccccccChhhHHHHH------------HHH-HH
Confidence 88999999999999999999999999999999999999999999999986432211000000 000 00
Q ss_pred CcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchh
Q 020064 178 PENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFL 257 (331)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (331)
.. ........+..... .......+..+ ...+... .. .......
T Consensus 146 ~~-~~~~~~~~~~~~~~------~~~~~~~~~~~----------------------~~~~~~~----~~----~~~~~~~ 188 (254)
T 2ocg_A 146 SK-WSERTRKPLEALYG------YDYFARTCEKW----------------------VDGIRQF----KH----LPDGNIC 188 (254)
T ss_dssp GG-SCHHHHHHHHHHHC------HHHHHHHHHHH----------------------HHHHHGG----GG----SGGGBSS
T ss_pred HH-HHHHhHHHHHHHhc------chhhHHHHHHH----------------------HHHHHHH----Hh----ccCCchh
Confidence 00 00000000000000 00000000000 0000000 00 0001123
Q ss_pred hhhccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHH
Q 020064 258 LDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKN 325 (331)
Q Consensus 258 ~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~ 325 (331)
.+.+.++ ++|+|+|+|++|.++|++.++.+.+.+|++++++++++||+++.++ |+++.+.|.+|++
T Consensus 189 ~~~l~~i-~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~-p~~~~~~i~~fl~ 254 (254)
T 2ocg_A 189 RHLLPRV-QCPALIVHGEKDPLVPRFHADFIHKHVKGSRLHLMPEGKHNLHLRF-ADEFNKLAEDFLQ 254 (254)
T ss_dssp GGGGGGC-CSCEEEEEETTCSSSCHHHHHHHHHHSTTCEEEEETTCCTTHHHHT-HHHHHHHHHHHHC
T ss_pred hhhhhcc-cCCEEEEecCCCccCCHHHHHHHHHhCCCCEEEEcCCCCCchhhhC-HHHHHHHHHHHhC
Confidence 4567888 5999999999999999999999999999999999999999999987 9999999999983
|
| >1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-37 Score=245.23 Aligned_cols=265 Identities=19% Similarity=0.241 Sum_probs=167.5
Q ss_pred eeEeCCCceEEEEeCCCCCCCcEEEeccCCCCCCC-CCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHH
Q 020064 26 ILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTT-PSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIE 104 (331)
Q Consensus 26 ~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~~-~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~ 104 (331)
++++.+|.+++|...| ++++|||+||++++... ...+..+.++||+|+++|+||||.|..+. ..++++++++|+.
T Consensus 2 ~~~~~~g~~l~y~~~g--~~~~vvllHG~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~--~~~~~~~~~~dl~ 77 (273)
T 1a8s_A 2 TFTTRDGTQIYYKDWG--SGQPIVFSHGWPLNADSWESQMIFLAAQGYRVIAHDRRGHGRSSQPW--SGNDMDTYADDLA 77 (273)
T ss_dssp EEECTTSCEEEEEEES--CSSEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCS--SCCSHHHHHHHHH
T ss_pred eEecCCCcEEEEEEcC--CCCEEEEECCCCCcHHHHhhHHhhHhhCCcEEEEECCCCCCCCCCCC--CCCCHHHHHHHHH
Confidence 4677788899999988 67899999998766554 44556666789999999999999998654 4679999999999
Q ss_pred HHHHHhCCCcEEEEEeChhHHHHHHHHHhC-CCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhh
Q 020064 105 KLRQHLEIPEWQVFGGSWGSTLALAYSLAH-PDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERS 183 (331)
Q Consensus 105 ~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~-p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (331)
++++.++.++++|+||||||.+++.+++++ |++|+++|++++.......... .........+..+...... ...
T Consensus 78 ~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~-~~~ 152 (273)
T 1a8s_A 78 QLIEHLDLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEA----NPGGLPMEVFDGIRQASLA-DRS 152 (273)
T ss_dssp HHHHHTTCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSS----CTTSBCHHHHHHHHHHHHH-HHH
T ss_pred HHHHHhCCCCeEEEEeChHHHHHHHHHHhcCchheeEEEEEcccCcccccCcc----ccccCcHHHHHHHHHHhHh-hHH
Confidence 999999999999999999999999988776 9999999999975421100000 0000000001000000000 000
Q ss_pred hhHHhhcc-ccCC---CchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhh
Q 020064 184 CFVDAYSK-RLNS---DDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLD 259 (331)
Q Consensus 184 ~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (331)
.+...+.. .+.. ............+.. ... .. ............ . ..+..+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-----------~~-~~~~~~~~~~~~-----~-------~~~~~~ 207 (273)
T 1a8s_A 153 QLYKDLASGPFFGFNQPGAKSSAGMVDWFWL-QGM-----------AA-GHKNAYDCIKAF-----S-------ETDFTE 207 (273)
T ss_dssp HHHHHHHHTTSSSTTSTTCCCCHHHHHHHHH-HHH-----------HS-CHHHHHHHHHHH-----H-------HCCCHH
T ss_pred HHHHHhhcccccCcCCcccccCHHHHHHHHH-hcc-----------cc-chhHHHHHHHHH-----h-------ccChhh
Confidence 00000000 0000 000000000000000 000 00 000000000000 0 123345
Q ss_pred hccccccccEEEEecCCCCccCCc-chHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHh
Q 020064 260 NIDNIRHINATIVQGRYDVCCPMM-SAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNL 326 (331)
Q Consensus 260 ~l~~i~~~P~l~i~G~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 326 (331)
.+.++ ++|+|+|+|++|.++|++ ..+.+.+.+|++++++++++||+++.++ |+++.+.|.+|+++
T Consensus 208 ~l~~i-~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~-p~~~~~~i~~fl~~ 273 (273)
T 1a8s_A 208 DLKKI-DVPTLVVHGDADQVVPIEASGIASAALVKGSTLKIYSGAPHGLTDTH-KDQLNADLLAFIKG 273 (273)
T ss_dssp HHHTC-CSCEEEEEETTCSSSCSTTTHHHHHHHSTTCEEEEETTCCSCHHHHT-HHHHHHHHHHHHHC
T ss_pred hhhcC-CCCEEEEECCCCccCChHHHHHHHHHhCCCcEEEEeCCCCCcchhhC-HHHHHHHHHHHHhC
Confidence 67888 599999999999999987 5566777889999999999999999886 99999999999963
|
| >1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-37 Score=248.23 Aligned_cols=276 Identities=16% Similarity=0.120 Sum_probs=165.8
Q ss_pred CccceeEeCCCceEEEEeCCCCCCCcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCC---CccchHH
Q 020064 22 YSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACL---DQNTTWD 98 (331)
Q Consensus 22 ~~~~~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~---~~~~~~~ 98 (331)
.+..++++ +|.+++|...| ++|+|||+||++++...|......+.+.|+||++|+||||.|+.+ .. ..+++++
T Consensus 9 ~~~~~~~~-~g~~l~y~~~G--~g~~lvllHG~~~~~~~w~~~~~~L~~~~~via~Dl~G~G~S~~~-~~~~~~~~~~~~ 84 (294)
T 1ehy_A 9 FKHYEVQL-PDVKIHYVREG--AGPTLLLLHGWPGFWWEWSKVIGPLAEHYDVIVPDLRGFGDSEKP-DLNDLSKYSLDK 84 (294)
T ss_dssp SCEEEEEC-SSCEEEEEEEE--CSSEEEEECCSSCCGGGGHHHHHHHHTTSEEEEECCTTSTTSCCC-CTTCGGGGCHHH
T ss_pred cceeEEEE-CCEEEEEEEcC--CCCEEEEECCCCcchhhHHHHHHHHhhcCEEEecCCCCCCCCCCC-ccccccCcCHHH
Confidence 34455555 56699999988 688999999987776555433333355699999999999999875 21 1589999
Q ss_pred HHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCC
Q 020064 99 LIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIP 178 (331)
Q Consensus 99 ~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (331)
+++|+.++++.++.++++|+||||||.+++.+|.++|++|+++|+++++...... ..... . .....|...... +
T Consensus 85 ~a~dl~~ll~~l~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~-~~~~~-~---~~~~~~~~~~~~-~ 158 (294)
T 1ehy_A 85 AADDQAALLDALGIEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPIQPDFGP-VYFGL-G---HVHESWYSQFHQ-L 158 (294)
T ss_dssp HHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHHHHTGGGEEEEEEECCSCTTC----------------CCHHHHHTT-C
T ss_pred HHHHHHHHHHHcCCCCEEEEEeChhHHHHHHHHHhChhheeEEEEecCCCCCcch-hhccc-h---hccCceEEEecC-c
Confidence 9999999999999999999999999999999999999999999999974321110 00000 0 000011100000 0
Q ss_pred cchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcC-----CccHHHHHHhhhhhhhhhccCCCCC
Q 020064 179 ENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRG-----EDDIFSLAFARIENHYFLNKGFFPS 253 (331)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (331)
. +..... .............+.. ..........++....+ ........ ..++........
T Consensus 159 ~-----~~~~~~----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 223 (294)
T 1ehy_A 159 D-----MAVEVV----GSSREVCKKYFKHFFD-HWSYRDELLTEEELEVHVDNCMKPDNIHGG-----FNYYRANIRPDA 223 (294)
T ss_dssp H-----HHHHHH----TSCHHHHHHHHHHHHH-HTSSSSCCSCHHHHHHHHHHHTSTTHHHHH-----HHHHHHHSSSSC
T ss_pred c-----hhHHHh----ccchhHHHHHHHHHhh-cccCCCCCCCHHHHHHHHHHhcCCcccchH-----HHHHHHHHhhhh
Confidence 0 000000 0000000000000000 00000000011100000 00000000 000000000000
Q ss_pred cchhhhhccccccccEEEEecCCCCccCC-cchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHH
Q 020064 254 DSFLLDNIDNIRHINATIVQGRYDVCCPM-MSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLK 324 (331)
Q Consensus 254 ~~~~~~~l~~i~~~P~l~i~G~~D~~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl 324 (331)
.......+.++ ++|+|+|+|++|.++|. +..+.+.+.+|++++++++++||+++.|+ |+++++.|.+|+
T Consensus 224 ~~~~~~~l~~i-~~P~Lvi~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~-p~~~~~~i~~fl 293 (294)
T 1ehy_A 224 ALWTDLDHTMS-DLPVTMIWGLGDTCVPYAPLIEFVPKYYSNYTMETIEDCGHFLMVEK-PEIAIDRIKTAF 293 (294)
T ss_dssp CCCCTGGGSCB-CSCEEEEEECCSSCCTTHHHHHHHHHHBSSEEEEEETTCCSCHHHHC-HHHHHHHHHHHC
T ss_pred hhcCCcccCcC-CCCEEEEEeCCCCCcchHHHHHHHHHHcCCCceEEeCCCCCChhhhC-HHHHHHHHHHHh
Confidence 00011246688 69999999999999984 67788888899999999999999999997 999999999997
|
| >3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-37 Score=246.53 Aligned_cols=276 Identities=14% Similarity=0.113 Sum_probs=168.6
Q ss_pred CccceeEeCCCceEEEEeCCCCC-CCcEEEeccCCCCCCCCC-cccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHH
Q 020064 22 YSTGILKVSDIHTIYWEQSGNPT-GHPVVFLHGGPGGGTTPS-NRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDL 99 (331)
Q Consensus 22 ~~~~~~~~~~g~~l~~~~~g~~~-~~~vl~~HG~~~~~~~~~-~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~ 99 (331)
.+..++...+|.+++|...|+++ +++|||+||++++...|. ++..+ .++|+|+++|+||||.|+.......++++++
T Consensus 5 ~~~~~~~~~~g~~l~~~~~g~~~~~~~vvllHG~~~~~~~~~~~~~~L-~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~ 83 (285)
T 3bwx_A 5 YEDRYWTSSDGLRLHFRAYEGDISRPPVLCLPGLTRNARDFEDLATRL-AGDWRVLCPEMRGRGDSDYAKDPMTYQPMQY 83 (285)
T ss_dssp SEEEEEECTTSCEEEEEEECBCTTSCCEEEECCTTCCGGGGHHHHHHH-BBTBCEEEECCTTBTTSCCCSSGGGCSHHHH
T ss_pred cccCeeecCCCceEEEEEcCCCCCCCcEEEECCCCcchhhHHHHHHHh-hcCCEEEeecCCCCCCCCCCCCccccCHHHH
Confidence 34566777888899999998644 789999999877655444 44444 4599999999999999986543346889999
Q ss_pred HHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhh-hhhHhhcccccCChhhHHhhhccCC
Q 020064 100 IDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKE-IDWFYEGGAAAIYPDAWESFRDLIP 178 (331)
Q Consensus 100 ~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (331)
++|+.++++.++.++++|+||||||.+++.+|.++|++|+++|++++.+..... ................|..
T Consensus 84 a~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 157 (285)
T 3bwx_A 84 LQDLEALLAQEGIERFVAIGTSLGGLLTMLLAAANPARIAAAVLNDVGPEVSPEGLERIRGYVGQGRNFETWMH------ 157 (285)
T ss_dssp HHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCHHHHHHHHHHTTCCCEESSHHH------
T ss_pred HHHHHHHHHhcCCCceEEEEeCHHHHHHHHHHHhCchheeEEEEecCCcccCcchhHHHHHHhcCCcccccHHH------
Confidence 999999999999999999999999999999999999999999998754321110 0000000000000000000
Q ss_pred cchhhhhHHhhc-cccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchh
Q 020064 179 ENERSCFVDAYS-KRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFL 257 (331)
Q Consensus 179 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (331)
....+.... ..+.............. .... . .......... ... . ..+..........+.
T Consensus 158 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~-~-~~~~~~~~~~-~~~----~----~~~~~~~~~~~~~~~ 218 (285)
T 3bwx_A 158 ---AARALQESSGDVYPDWDITQWLRYAKR-----IMVL-G-SSGRIAFDYD-MKI----A----EPFEAPVGATPQVDM 218 (285)
T ss_dssp ---HHHHHHHHHTTTSTTCCHHHHHHHHHH-----HEEE-C-TTSCEEESBC-GGG----G----CCTTSCTTCCCSSCC
T ss_pred ---HHHHHHHhhhhcccccChHHHHHHHHh-----hhee-C-CCCceeeccC-HHH----H----HHHhhhhhccccchh
Confidence 000000000 00000000000000000 0000 0 0000000000 000 0 000000000001122
Q ss_pred hhhccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHh
Q 020064 258 LDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNL 326 (331)
Q Consensus 258 ~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 326 (331)
...+.++.++|+|+|+|++|.+++++.++.+.+. |++++++++++||+++.++ |+.+ +.|.+|+++
T Consensus 219 ~~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~-p~~~-~~i~~fl~~ 284 (285)
T 3bwx_A 219 WPLFDALATRPLLVLRGETSDILSAQTAAKMASR-PGVELVTLPRIGHAPTLDE-PESI-AAIGRLLER 284 (285)
T ss_dssp HHHHHHHTTSCEEEEEETTCSSSCHHHHHHHHTS-TTEEEEEETTCCSCCCSCS-HHHH-HHHHHHHTT
T ss_pred hHHHHHccCCCeEEEEeCCCCccCHHHHHHHHhC-CCcEEEEeCCCCccchhhC-chHH-HHHHHHHHh
Confidence 3334444149999999999999999999999999 9999999999999999987 8876 689999975
|
| >2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-37 Score=244.53 Aligned_cols=257 Identities=18% Similarity=0.188 Sum_probs=166.0
Q ss_pred CceEEEEeCCCCCCCcEEEeccCCCCCCCC-CcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHh
Q 020064 32 IHTIYWEQSGNPTGHPVVFLHGGPGGGTTP-SNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHL 110 (331)
Q Consensus 32 g~~l~~~~~g~~~~~~vl~~HG~~~~~~~~-~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (331)
+.+++|...| ++++|||+||++++...| ..+..+ .++|+|+++|+||||.|..+... .++++++++|+.++++.+
T Consensus 5 ~~~~~y~~~G--~g~~vvllHG~~~~~~~~~~~~~~L-~~~~~vi~~Dl~G~G~S~~~~~~-~~~~~~~~~dl~~~l~~l 80 (269)
T 2xmz_A 5 HYKFYEANVE--TNQVLVFLHGFLSDSRTYHNHIEKF-TDNYHVITIDLPGHGEDQSSMDE-TWNFDYITTLLDRILDKY 80 (269)
T ss_dssp SEEEECCSSC--CSEEEEEECCTTCCGGGGTTTHHHH-HTTSEEEEECCTTSTTCCCCTTS-CCCHHHHHHHHHHHHGGG
T ss_pred cceEEEEEcC--CCCeEEEEcCCCCcHHHHHHHHHHH-hhcCeEEEecCCCCCCCCCCCCC-ccCHHHHHHHHHHHHHHc
Confidence 4589999988 567899999987765544 444444 45699999999999999876521 579999999999999999
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhc
Q 020064 111 EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYS 190 (331)
Q Consensus 111 ~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (331)
+.++++|+||||||.+|+.+|.++|++|+++|++++............... ....+.. .+.......+...+.
T Consensus 81 ~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~----~~~~~~~---~~~~~~~~~~~~~~~ 153 (269)
T 2xmz_A 81 KDKSITLFGYSMGGRVALYYAINGHIPISNLILESTSPGIKEEANQLERRL----VDDARAK---VLDIAGIELFVNDWE 153 (269)
T ss_dssp TTSEEEEEEETHHHHHHHHHHHHCSSCCSEEEEESCCSCCSSHHHHHHHHH----HHHHHHH---HHHHHCHHHHHHHHT
T ss_pred CCCcEEEEEECchHHHHHHHHHhCchheeeeEEEcCCcccCCchhHHHHhh----hhhHHHH---hhccccHHHHHHHHH
Confidence 999999999999999999999999999999999997543221111000000 0000000 000000011111111
Q ss_pred cc--cCC---CchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccc
Q 020064 191 KR--LNS---DDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIR 265 (331)
Q Consensus 191 ~~--~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 265 (331)
.. +.. ....... .+... .. ...+. .+...+... .. ....+..+.+.++
T Consensus 154 ~~~~~~~~~~~~~~~~~----~~~~~--~~---~~~~~--------~~~~~~~~~--------~~-~~~~~~~~~l~~i- 206 (269)
T 2xmz_A 154 KLPLFQSQLELPVEIQH----QIRQQ--RL---SQSPH--------KMAKALRDY--------GT-GQMPNLWPRLKEI- 206 (269)
T ss_dssp TSGGGGGGGGSCHHHHH----HHHHH--HH---TSCHH--------HHHHHHHHH--------ST-TTSCCCGGGGGGC-
T ss_pred hCccccccccCCHHHHH----HHHHH--Hh---ccCcH--------HHHHHHHHH--------Hh-ccCccHHHHHHhc-
Confidence 10 000 0000000 00000 00 00010 000011000 00 0022345578889
Q ss_pred cccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhhh
Q 020064 266 HINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNLIK 328 (331)
Q Consensus 266 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~ 328 (331)
++|+|+|+|++|.++|++..+ +.+.+|++++++++++||+++.++ |+++.+.|.+|+++..
T Consensus 207 ~~P~lii~G~~D~~~~~~~~~-~~~~~~~~~~~~i~~~gH~~~~e~-p~~~~~~i~~fl~~~~ 267 (269)
T 2xmz_A 207 KVPTLILAGEYDEKFVQIAKK-MANLIPNSKCKLISATGHTIHVED-SDEFDTMILGFLKEEQ 267 (269)
T ss_dssp CSCEEEEEETTCHHHHHHHHH-HHHHSTTEEEEEETTCCSCHHHHS-HHHHHHHHHHHHHHHC
T ss_pred CCCEEEEEeCCCcccCHHHHH-HHhhCCCcEEEEeCCCCCChhhcC-HHHHHHHHHHHHHHhc
Confidence 599999999999999887655 888899999999999999999997 9999999999998754
|
| >3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-37 Score=240.65 Aligned_cols=247 Identities=17% Similarity=0.167 Sum_probs=159.7
Q ss_pred eEEEEeCCCC---CCCcEEEeccCCCCCCCCC-cccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHH
Q 020064 34 TIYWEQSGNP---TGHPVVFLHGGPGGGTTPS-NRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQH 109 (331)
Q Consensus 34 ~l~~~~~g~~---~~~~vl~~HG~~~~~~~~~-~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~ 109 (331)
+++|...|++ ++++|||+||++++...|. ++..+ .+.|+|+++|+||||.|+... .++++++++|+.++++.
T Consensus 2 ~l~y~~~G~~~~~~~~~vvllHG~~~~~~~w~~~~~~L-~~~~~via~Dl~G~G~S~~~~---~~~~~~~a~dl~~~l~~ 77 (255)
T 3bf7_A 2 KLNIRAQTAQNQHNNSPIVLVHGLFGSLDNLGVLARDL-VNDHNIIQVDVRNHGLSPREP---VMNYPAMAQDLVDTLDA 77 (255)
T ss_dssp CCCEEEECCSSCCCCCCEEEECCTTCCTTTTHHHHHHH-TTTSCEEEECCTTSTTSCCCS---CCCHHHHHHHHHHHHHH
T ss_pred ceeeeecCccccCCCCCEEEEcCCcccHhHHHHHHHHH-HhhCcEEEecCCCCCCCCCCC---CcCHHHHHHHHHHHHHH
Confidence 4678888864 6889999999877655544 44444 556999999999999998654 57899999999999999
Q ss_pred hCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhcc--CCcchhhhhHH
Q 020064 110 LEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDL--IPENERSCFVD 187 (331)
Q Consensus 110 ~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 187 (331)
++.++++|+||||||.+++.+|.++|++|+++|++++.+...... .....+..+... ........ ..
T Consensus 78 l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~p~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~-~~ 146 (255)
T 3bf7_A 78 LQIDKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVR----------RHDEIFAAINAVSESDAQTRQQ-AA 146 (255)
T ss_dssp HTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCCSC----------CCHHHHHHHHHHHHSCCCSHHH-HH
T ss_pred cCCCCeeEEeeCccHHHHHHHHHhCcHhhccEEEEcCCcccCCcc----------cHHHHHHHHHhccccccccHHH-HH
Confidence 999999999999999999999999999999999997543211000 000000000000 00000000 00
Q ss_pred hhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccc
Q 020064 188 AYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHI 267 (331)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~ 267 (331)
......... ... ..+. ....... . . ..........+... .....+.++ ++
T Consensus 147 ~~~~~~~~~-~~~-----~~~~-----~~~~~~~-~-~-~~~~~~~~~~~~~~---------------~~~~~l~~i-~~ 196 (255)
T 3bf7_A 147 AIMRQHLNE-EGV-----IQFL-----LKSFVDG-E-W-RFNVPVLWDQYPHI---------------VGWEKIPAW-DH 196 (255)
T ss_dssp HHHTTTCCC-HHH-----HHHH-----HTTEETT-E-E-SSCHHHHHHTHHHH---------------HCCCCCCCC-CS
T ss_pred HHHhhhcch-hHH-----HHHH-----HHhccCC-c-e-eecHHHHHhhhhhc---------------ccccccccc-CC
Confidence 000000000 000 0000 0000000 0 0 00000000000000 000135678 59
Q ss_pred cEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHh
Q 020064 268 NATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNL 326 (331)
Q Consensus 268 P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 326 (331)
|+|+|+|++|.+++++.++.+.+.+|++++++++++||+++.++ |+++.+.|.+|+++
T Consensus 197 P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~-p~~~~~~i~~fl~~ 254 (255)
T 3bf7_A 197 PALFIPGGNSPYVSEQYRDDLLAQFPQARAHVIAGAGHWVHAEK-PDAVLRAIRRYLND 254 (255)
T ss_dssp CEEEECBTTCSTTCGGGHHHHHHHCTTEEECCBTTCCSCHHHHC-HHHHHHHHHHHHHT
T ss_pred CeEEEECCCCCCCCHHHHHHHHHHCCCCeEEEeCCCCCccccCC-HHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999997 99999999999964
|
| >3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-36 Score=243.26 Aligned_cols=285 Identities=14% Similarity=0.121 Sum_probs=180.7
Q ss_pred CCCccceeEeCCCceEEEEeCCCCCCCcEEEeccCCCCCC-CCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHH
Q 020064 20 EPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGT-TPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWD 98 (331)
Q Consensus 20 ~~~~~~~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~-~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~ 98 (331)
.+.+..+++++ |.+++|...| ++|+|||+||++++.. |..++..++.+||+|+++|+||||.|..+. ..+++++
T Consensus 7 ~~~~~~~~~~~-g~~l~~~~~g--~~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~S~~~~--~~~~~~~ 81 (309)
T 3u1t_A 7 FPFAKRTVEVE-GATIAYVDEG--SGQPVLFLHGNPTSSYLWRNIIPYVVAAGYRAVAPDLIGMGDSAKPD--IEYRLQD 81 (309)
T ss_dssp CCCCCEEEEET-TEEEEEEEEE--CSSEEEEECCTTCCGGGGTTTHHHHHHTTCEEEEECCTTSTTSCCCS--SCCCHHH
T ss_pred ccccceEEEEC-CeEEEEEEcC--CCCEEEEECCCcchhhhHHHHHHHHHhCCCEEEEEccCCCCCCCCCC--cccCHHH
Confidence 34667788885 5599999998 5889999999776644 455556657889999999999999999766 3789999
Q ss_pred HHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhcc-C
Q 020064 99 LIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDL-I 177 (331)
Q Consensus 99 ~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 177 (331)
+++|+.++++.++.++++|+||||||.+++.+|.++|++|+++|++++............. ........+..+... .
T Consensus 82 ~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 159 (309)
T 3u1t_A 82 HVAYMDGFIDALGLDDMVLVIHDWGSVIGMRHARLNPDRVAAVAFMEALVPPALPMPSYEA--MGPQLGPLFRDLRTADV 159 (309)
T ss_dssp HHHHHHHHHHHHTCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEESCTTTCSBSCSGG--GHHHHHHHHHHHTSTTH
T ss_pred HHHHHHHHHHHcCCCceEEEEeCcHHHHHHHHHHhChHhheEEEEeccCCCCccccccccc--cchhhhHHHHHHhccch
Confidence 9999999999999999999999999999999999999999999999986543310000000 000000000000000 0
Q ss_pred C---cchhhhhHHhhcccc---CCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCC
Q 020064 178 P---ENERSCFVDAYSKRL---NSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFF 251 (331)
Q Consensus 178 ~---~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (331)
. ......+...+.... .............. . ..+.. .......+........... ..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~-~~~~~-----~~~~~~~~~~~~~~~~~~~-~~ 222 (309)
T 3u1t_A 160 GEKMVLDGNFFVETILPEMGVVRSLSEAEMAAYRAP----------F-PTRQS-----RLPTLQWPREVPIGGEPAF-AE 222 (309)
T ss_dssp HHHHHTTTCHHHHTHHHHTSCSSCCCHHHHHHHHTT----------C-CSTGG-----GHHHHHHHHHSCBTTBSHH-HH
T ss_pred hhhhccccceehhhhcccccccccCCHHHHHHHHHh----------c-CCccc-----cchHHHHHHHhccccccch-hh
Confidence 0 000001111111111 00111110000000 0 00000 0000000000000000000 00
Q ss_pred CCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhhhcC
Q 020064 252 PSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNLIKNG 330 (331)
Q Consensus 252 ~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~~~ 330 (331)
....+....+.++ ++|+|+|+|++|.++|++.++.+.+.+++.++++++++||+++.++ ++++.+.|.+||++..+.
T Consensus 223 ~~~~~~~~~l~~i-~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~-p~~~~~~i~~fl~~~~~~ 299 (309)
T 3u1t_A 223 AEVLKNGEWLMAS-PIPKLLFHAEPGALAPKPVVDYLSENVPNLEVRFVGAGTHFLQEDH-PHLIGQGIADWLRRNKPH 299 (309)
T ss_dssp HHHHHHHHHHHHC-CSCEEEEEEEECSSSCHHHHHHHHHHSTTEEEEEEEEESSCHHHHC-HHHHHHHHHHHHHHHCCC
T ss_pred hhhhhhhhhcccC-CCCEEEEecCCCCCCCHHHHHHHHhhCCCCEEEEecCCcccchhhC-HHHHHHHHHHHHHhcchh
Confidence 0012344567788 5999999999999999999999999999999999999999999997 999999999999988643
|
| >1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-37 Score=244.71 Aligned_cols=267 Identities=20% Similarity=0.212 Sum_probs=168.7
Q ss_pred ccceeEeCC-C--ceEEEEeCCCCCCC-cEEEeccCC---CCC-CCCCcc-cccCCCCcEEEEecCCCCCCCCCCCCCCc
Q 020064 23 STGILKVSD-I--HTIYWEQSGNPTGH-PVVFLHGGP---GGG-TTPSNR-RFFDPDFYRIILFDQRGAGKSTPHACLDQ 93 (331)
Q Consensus 23 ~~~~~~~~~-g--~~l~~~~~g~~~~~-~vl~~HG~~---~~~-~~~~~~-~~~~~~g~~vi~~D~~G~G~s~~~~~~~~ 93 (331)
..+++++++ | .+++|...|+ ++ +|||+||++ ++. .|...+ ..+ .++|+|+++|+||||.|+.+.. ..
T Consensus 12 ~~~~~~~~~~g~~~~l~y~~~g~--g~~~vvllHG~~~~~~~~~~~~~~~~~~l-~~~~~vi~~D~~G~G~S~~~~~-~~ 87 (289)
T 1u2e_A 12 TSRFLNVEEAGKTLRIHFNDCGQ--GDETVVLLHGSGPGATGWANFSRNIDPLV-EAGYRVILLDCPGWGKSDSVVN-SG 87 (289)
T ss_dssp HEEEEEEEETTEEEEEEEEEECC--CSSEEEEECCCSTTCCHHHHTTTTHHHHH-HTTCEEEEECCTTSTTSCCCCC-SS
T ss_pred cceEEEEcCCCcEEEEEEeccCC--CCceEEEECCCCcccchhHHHHHhhhHHH-hcCCeEEEEcCCCCCCCCCCCc-cc
Confidence 356777762 5 6999999884 56 899999975 322 234444 444 4569999999999999987652 25
Q ss_pred cchHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhh
Q 020064 94 NTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESF 173 (331)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (331)
++.+++++|+.++++.++.++++|+||||||.+++.+|.++|++|+++|++++........ ...........
T Consensus 88 ~~~~~~~~~l~~~l~~l~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~--------~~~~~~~~~~~ 159 (289)
T 1u2e_A 88 SRSDLNARILKSVVDQLDIAKIHLLGNSMGGHSSVAFTLKWPERVGKLVLMGGGTGGMSLF--------TPMPTEGIKRL 159 (289)
T ss_dssp CHHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSS--------SCSSCHHHHHH
T ss_pred cCHHHHHHHHHHHHHHhCCCceEEEEECHhHHHHHHHHHHCHHhhhEEEEECCCccccccc--------cccchhhHHHH
Confidence 7899999999999999999999999999999999999999999999999999865311000 00000000000
Q ss_pred hccCCcchhhhhHHhhccccCCCchH-HHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCC
Q 020064 174 RDLIPENERSCFVDAYSKRLNSDDKE-TQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFP 252 (331)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (331)
......... .....+...+...... ........+.. .. ..+. .+....... .... .
T Consensus 160 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~----~~~~--------~~~~~~~~~----~~~~--~- 216 (289)
T 1u2e_A 160 NQLYRQPTI-ENLKLMMDIFVFDTSDLTDALFEARLNN---ML----SRRD--------HLENFVKSL----EANP--K- 216 (289)
T ss_dssp HHHHHSCCH-HHHHHHHHTTSSCTTSCCHHHHHHHHHH---HH----HTHH--------HHHHHHHHH----HHCS--C-
T ss_pred HHHHhcchH-HHHHHHHHHhhcCcccCCHHHHHHHHHH---hh----cChh--------HHHHHHHHH----Hhcc--c-
Confidence 000000000 0000000000000000 00000000000 00 0000 000000000 0000 0
Q ss_pred CcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHh
Q 020064 253 SDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNL 326 (331)
Q Consensus 253 ~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 326 (331)
...+....+.++ ++|+|+|+|++|.++|++.++.+.+.+|++++++++++||+++.++ |+++.+.|.+|+++
T Consensus 217 ~~~~~~~~l~~i-~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~-p~~~~~~i~~fl~~ 288 (289)
T 1u2e_A 217 QFPDFGPRLAEI-KAQTLIVWGRNDRFVPMDAGLRLLSGIAGSELHIFRDCGHWAQWEH-ADAFNQLVLNFLAR 288 (289)
T ss_dssp CSCCCGGGGGGC-CSCEEEEEETTCSSSCTHHHHHHHHHSTTCEEEEESSCCSCHHHHT-HHHHHHHHHHHHTC
T ss_pred cccchhhHHhhc-CCCeEEEeeCCCCccCHHHHHHHHhhCCCcEEEEeCCCCCchhhcC-HHHHHHHHHHHhcC
Confidence 022344577889 5999999999999999999999999999999999999999999997 99999999999964
|
| >3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-37 Score=244.55 Aligned_cols=280 Identities=11% Similarity=0.058 Sum_probs=173.5
Q ss_pred CCCCccceeEeCCCceEEEEeCCCCCCCcEEEeccCCCCCC-CCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchH
Q 020064 19 VEPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGT-TPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTW 97 (331)
Q Consensus 19 ~~~~~~~~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~-~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~ 97 (331)
....+..++++ +|.+++|...| ++|+|||+||++++.. |...+..+.+. |+|+++|+||||.|..+. ..++++
T Consensus 7 ~~~~~~~~~~~-~g~~l~~~~~g--~~~~vv~lHG~~~~~~~~~~~~~~L~~~-~~vi~~D~~G~G~S~~~~--~~~~~~ 80 (301)
T 3kda_A 7 PNGFESAYREV-DGVKLHYVKGG--QGPLVMLVHGFGQTWYEWHQLMPELAKR-FTVIAPDLPGLGQSEPPK--TGYSGE 80 (301)
T ss_dssp CTTCEEEEEEE-TTEEEEEEEEE--SSSEEEEECCTTCCGGGGTTTHHHHTTT-SEEEEECCTTSTTCCCCS--SCSSHH
T ss_pred ccccceEEEee-CCeEEEEEEcC--CCCEEEEECCCCcchhHHHHHHHHHHhc-CeEEEEcCCCCCCCCCCC--CCccHH
Confidence 33455666666 55699999999 7899999999777654 44555555555 999999999999998774 578999
Q ss_pred HHHHHHHHHHHHhCCCc-EEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhcc
Q 020064 98 DLIDDIEKLRQHLEIPE-WQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDL 176 (331)
Q Consensus 98 ~~~~~~~~~~~~~~~~~-v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (331)
++++|+.++++.++.++ ++++||||||.+++.+|.++|++|+++|+++++................ ....|......
T Consensus 81 ~~~~~l~~~l~~l~~~~p~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 158 (301)
T 3kda_A 81 QVAVYLHKLARQFSPDRPFDLVAHDIGIWNTYPMVVKNQADIARLVYMEAPIPDARIYRFPAFTAQG--ESLVWHFSFFA 158 (301)
T ss_dssp HHHHHHHHHHHHHCSSSCEEEEEETHHHHTTHHHHHHCGGGEEEEEEESSCCSSGGGGGSBSEETTE--ECSSTHHHHHH
T ss_pred HHHHHHHHHHHHcCCCccEEEEEeCccHHHHHHHHHhChhhccEEEEEccCCCCCCccchhhhcchh--hhhhhhHHHhh
Confidence 99999999999999988 9999999999999999999999999999999865432211100000000 00000000000
Q ss_pred C-C-------cchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhcc
Q 020064 177 I-P-------ENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNK 248 (331)
Q Consensus 177 ~-~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (331)
. + ......+...+..................+... . ..+... ......+........
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-----~~~~~~-----~~~~~~~~~~~~~~~--- 223 (301)
T 3kda_A 159 ADDRLAETLIAGKERFFLEHFIKSHASNTEVFSERLLDLYARS--Y-----AKPHSL-----NASFEYYRALNESVR--- 223 (301)
T ss_dssp CSTTHHHHHHTTCHHHHHHHHHHHTCSSGGGSCHHHHHHHHHH--H-----TSHHHH-----HHHHHHHHTHHHHHH---
T ss_pred cCcchHHHHhccchHHHHHHHHHhccCCcccCCHHHHHHHHHH--h-----cccccc-----chHHHHHHhhccchh---
Confidence 0 0 000000111111111111000000000000000 0 000000 000000000000000
Q ss_pred CCCCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhhh
Q 020064 249 GFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNLIK 328 (331)
Q Consensus 249 ~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~ 328 (331)
........+.++ ++|+|+|+|++| +++...+.+.+.++++++++++++||+++.++ |+++++.|.+|+++..
T Consensus 224 ----~~~~~~~~l~~i-~~P~l~i~G~~D--~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~-p~~~~~~i~~~l~~~~ 295 (301)
T 3kda_A 224 ----QNAELAKTRLQM-PTMTLAGGGAGG--MGTFQLEQMKAYAEDVEGHVLPGCGHWLPEEC-AAPMNRLVIDFLSRGR 295 (301)
T ss_dssp ----HHHHHTTSCBCS-CEEEEEECSTTS--CTTHHHHHHHTTBSSEEEEEETTCCSCHHHHT-HHHHHHHHHHHHTTSC
T ss_pred ----hcccchhhcccc-CcceEEEecCCC--CChhHHHHHHhhcccCeEEEcCCCCcCchhhC-HHHHHHHHHHHHhhCc
Confidence 011122344588 699999999999 77888889999999999999999999999997 9999999999998865
Q ss_pred c
Q 020064 329 N 329 (331)
Q Consensus 329 ~ 329 (331)
+
T Consensus 296 ~ 296 (301)
T 3kda_A 296 H 296 (301)
T ss_dssp C
T ss_pred h
Confidence 3
|
| >1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-37 Score=244.04 Aligned_cols=263 Identities=18% Similarity=0.215 Sum_probs=169.2
Q ss_pred CCCccceeEeCCCceEEEEeCCCCCCCcEEEeccCC---CCCC-CCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccc
Q 020064 20 EPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGP---GGGT-TPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNT 95 (331)
Q Consensus 20 ~~~~~~~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~---~~~~-~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~ 95 (331)
.+.+..+++. +|.+++|...| ++++|||+||++ ++.. |...+..+ .++|+|+++|+||||.|. +.. ..++
T Consensus 14 ~~~~~~~~~~-~g~~l~y~~~g--~g~~vvllHG~~~~~~~~~~~~~~~~~L-~~~~~vi~~Dl~G~G~S~-~~~-~~~~ 87 (296)
T 1j1i_A 14 RAYVERFVNA-GGVETRYLEAG--KGQPVILIHGGGAGAESEGNWRNVIPIL-ARHYRVIAMDMLGFGKTA-KPD-IEYT 87 (296)
T ss_dssp -CCEEEEEEE-TTEEEEEEEEC--CSSEEEEECCCSTTCCHHHHHTTTHHHH-TTTSEEEEECCTTSTTSC-CCS-SCCC
T ss_pred cCCcceEEEE-CCEEEEEEecC--CCCeEEEECCCCCCcchHHHHHHHHHHH-hhcCEEEEECCCCCCCCC-CCC-CCCC
Confidence 3445667776 56699999988 578999999975 3322 34444545 456999999999999998 432 3678
Q ss_pred hHHHHHHHHHHHHHhCC-CcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhh
Q 020064 96 TWDLIDDIEKLRQHLEI-PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFR 174 (331)
Q Consensus 96 ~~~~~~~~~~~~~~~~~-~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (331)
++++++|+.++++.++. ++++|+||||||.+++.+|.++|++++++|++++.......... .....
T Consensus 88 ~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~-------------~~~~~ 154 (296)
T 1j1i_A 88 QDRRIRHLHDFIKAMNFDGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIHED-------------LRPII 154 (296)
T ss_dssp HHHHHHHHHHHHHHSCCSSCEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESCCBCCCC----------------------
T ss_pred HHHHHHHHHHHHHhcCCCCCeEEEEEChhHHHHHHHHHhChHhhhEEEEECCCCCCCCCCch-------------HHHHh
Confidence 99999999999999998 89999999999999999999999999999999986532110000 00000
Q ss_pred ccCCc-chhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCC
Q 020064 175 DLIPE-NERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPS 253 (331)
Q Consensus 175 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (331)
..... .....+...+.............. .+... . .+.. ...+...+.... .. ..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~---~-----~~~~-----~~~~~~~~~~~~----~~----~~ 210 (296)
T 1j1i_A 155 NYDFTREGMVHLVKALTNDGFKIDDAMINS---RYTYA---T-----DEAT-----RKAYVATMQWIR----EQ----GG 210 (296)
T ss_dssp -CCSCHHHHHHHHHHHSCTTCCCCHHHHHH---HHHHH---H-----SHHH-----HHHHHHHHHHHH----HH----TS
T ss_pred cccCCchHHHHHHHHhccCcccccHHHHHH---HHHHh---h-----Ccch-----hhHHHHHHHHHH----hc----cc
Confidence 00000 000011111100000000000000 00000 0 0000 000000000000 00 00
Q ss_pred cchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhh
Q 020064 254 DSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNLI 327 (331)
Q Consensus 254 ~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 327 (331)
.......+.++ ++|+|+|+|++|.++|++.++.+.+.++++++++++++||+++.++ |+++.+.|.+|+++.
T Consensus 211 ~~~~~~~l~~i-~~P~Lii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~-p~~~~~~i~~fl~~~ 282 (296)
T 1j1i_A 211 LFYDPEFIRKV-QVPTLVVQGKDDKVVPVETAYKFLDLIDDSWGYIIPHCGHWAMIEH-PEDFANATLSFLSLR 282 (296)
T ss_dssp SBCCHHHHTTC-CSCEEEEEETTCSSSCHHHHHHHHHHCTTEEEEEESSCCSCHHHHS-HHHHHHHHHHHHHHC
T ss_pred ccccHHHhhcC-CCCEEEEEECCCcccCHHHHHHHHHHCCCCEEEEECCCCCCchhcC-HHHHHHHHHHHHhcc
Confidence 11233467888 5999999999999999999999999999999999999999999997 999999999999764
|
| >1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-36 Score=240.94 Aligned_cols=265 Identities=15% Similarity=0.138 Sum_probs=166.5
Q ss_pred cceeEeCCCceEEEEeCCCCCCCc-EEEeccCC---CCC-CCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHH
Q 020064 24 TGILKVSDIHTIYWEQSGNPTGHP-VVFLHGGP---GGG-TTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWD 98 (331)
Q Consensus 24 ~~~~~~~~g~~l~~~~~g~~~~~~-vl~~HG~~---~~~-~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~ 98 (331)
.+++++ +|.+++|...|++ +++ |||+||++ ++. .|...+..+ .++|+|+++|+||||.|..+.. ..+++++
T Consensus 9 ~~~~~~-~g~~l~y~~~g~~-g~p~vvllHG~~~~~~~~~~~~~~~~~L-~~~~~vi~~D~~G~G~S~~~~~-~~~~~~~ 84 (285)
T 1c4x_A 9 EKRFPS-GTLASHALVAGDP-QSPAVVLLHGAGPGAHAASNWRPIIPDL-AENFFVVAPDLIGFGQSEYPET-YPGHIMS 84 (285)
T ss_dssp EEEECC-TTSCEEEEEESCT-TSCEEEEECCCSTTCCHHHHHGGGHHHH-HTTSEEEEECCTTSTTSCCCSS-CCSSHHH
T ss_pred ceEEEE-CCEEEEEEecCCC-CCCEEEEEeCCCCCCcchhhHHHHHHHH-hhCcEEEEecCCCCCCCCCCCC-cccchhh
Confidence 445555 5569999998853 455 99999975 332 233444444 4569999999999999986542 2578999
Q ss_pred H----HHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhh
Q 020064 99 L----IDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFR 174 (331)
Q Consensus 99 ~----~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (331)
+ ++|+.++++.++.++++|+||||||.+++.+|.++|++|+++|++++........ ........
T Consensus 85 ~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~------------~~~~~~~~ 152 (285)
T 1c4x_A 85 WVGMRVEQILGLMNHFGIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMNAR------------PPELARLL 152 (285)
T ss_dssp HHHHHHHHHHHHHHHHTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCSSC------------CHHHHHHH
T ss_pred hhhhHHHHHHHHHHHhCCCccEEEEEChHHHHHHHHHHhChHHhheEEEeccCCCCCCcc------------chhHHHHH
Confidence 9 9999999999999999999999999999999999999999999999865321100 00000000
Q ss_pred ccCCcchhhhhHHhhccccCCCchHH--HHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCC
Q 020064 175 DLIPENERSCFVDAYSKRLNSDDKET--QYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFP 252 (331)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (331)
........ .....+...+....... ......... ... ..+.. ...+... .........
T Consensus 153 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-----~~~~~---------~~~~~~~---~~~~~~~~~ 212 (285)
T 1c4x_A 153 AFYADPRL-TPYRELIHSFVYDPENFPGMEEIVKSRF--EVA-----NDPEV---------RRIQEVM---FESMKAGME 212 (285)
T ss_dssp TGGGSCCH-HHHHHHHHTTSSCSTTCTTHHHHHHHHH--HHH-----HCHHH---------HHHHHHH---HHHHSSCCG
T ss_pred HHhccccH-HHHHHHHHHhhcCcccccCcHHHHHHHH--Hhc-----cCHHH---------HHHHHHH---hcccccccc
Confidence 00000000 00001111110000000 000000000 000 00000 0000000 000000000
Q ss_pred CcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHh
Q 020064 253 SDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNL 326 (331)
Q Consensus 253 ~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 326 (331)
......+.+.++ ++|+|+|+|++|.++|++.++.+.+.+|++++++++++||+++.++ |+++.+.|.+||++
T Consensus 213 ~~~~~~~~l~~i-~~P~lii~G~~D~~~p~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~-p~~~~~~i~~fl~~ 284 (285)
T 1c4x_A 213 SLVIPPATLGRL-PHDVLVFHGRQDRIVPLDTSLYLTKHLKHAELVVLDRCGHWAQLER-WDAMGPMLMEHFRA 284 (285)
T ss_dssp GGCCCHHHHTTC-CSCEEEEEETTCSSSCTHHHHHHHHHCSSEEEEEESSCCSCHHHHS-HHHHHHHHHHHHHC
T ss_pred ccccchhhhccC-CCCEEEEEeCCCeeeCHHHHHHHHHhCCCceEEEeCCCCcchhhcC-HHHHHHHHHHHHhc
Confidence 011233567888 5999999999999999999999999999999999999999999997 99999999999974
|
| >2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-36 Score=239.81 Aligned_cols=260 Identities=12% Similarity=0.086 Sum_probs=161.8
Q ss_pred eeEeCCCceEEEEeC--CCCCCCcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHH
Q 020064 26 ILKVSDIHTIYWEQS--GNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDI 103 (331)
Q Consensus 26 ~~~~~~g~~l~~~~~--g~~~~~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~ 103 (331)
++++ +|.+++|... |+ .+|+|||+||++++...|......++++|+||++|+||||.|+.+. ..++++++++|+
T Consensus 8 ~~~~-~g~~l~y~~~~~G~-~~p~vvllHG~~~~~~~w~~~~~~L~~~~rvia~DlrGhG~S~~~~--~~~~~~~~a~dl 83 (276)
T 2wj6_A 8 ETLV-FDNKLSYIDNQRDT-DGPAILLLPGWCHDHRVYKYLIQELDADFRVIVPNWRGHGLSPSEV--PDFGYQEQVKDA 83 (276)
T ss_dssp EEEE-TTEEEEEEECCCCC-SSCEEEEECCTTCCGGGGHHHHHHHTTTSCEEEECCTTCSSSCCCC--CCCCHHHHHHHH
T ss_pred EEee-CCeEEEEEEecCCC-CCCeEEEECCCCCcHHHHHHHHHHHhcCCEEEEeCCCCCCCCCCCC--CCCCHHHHHHHH
Confidence 3444 5669999998 73 4588999999887766555444444678999999999999998764 468999999999
Q ss_pred HHHHHHhCCCcEEEEEeChhHHHHHHHHHhC-CCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCc-ch
Q 020064 104 EKLRQHLEIPEWQVFGGSWGSTLALAYSLAH-PDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPE-NE 181 (331)
Q Consensus 104 ~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~-p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 181 (331)
.++++.+++++++|+||||||.+++.+|.++ |++|+++|++++....... .... ........... ..
T Consensus 84 ~~ll~~l~~~~~~lvGhSmGG~va~~~A~~~~P~rv~~lvl~~~~~~~~~~-~~~~----------~~~~~~~~~~~~~~ 152 (276)
T 2wj6_A 84 LEILDQLGVETFLPVSHSHGGWVLVELLEQAGPERAPRGIIMDWLMWAPKP-DFAK----------SLTLLKDPERWREG 152 (276)
T ss_dssp HHHHHHHTCCSEEEEEEGGGHHHHHHHHHHHHHHHSCCEEEESCCCSSCCH-HHHH----------HHHHHHCTTTHHHH
T ss_pred HHHHHHhCCCceEEEEECHHHHHHHHHHHHhCHHhhceEEEecccccCCCc-hHHH----------HhhhccCcchHHHH
Confidence 9999999999999999999999999999999 9999999999874321100 0000 00000000000 00
Q ss_pred hhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhc
Q 020064 182 RSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNI 261 (331)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 261 (331)
...+...+.... ....... . ...... ......+.......... +.. .....+.+
T Consensus 153 ~~~~~~~~~~~~--~~~~~~~----~------~~~~~~-------~~~~~~~~~~~~~~~~~-~~~------~~~~~~~l 206 (276)
T 2wj6_A 153 THGLFDVWLDGH--DEKRVRH----H------LLEEMA-------DYGYDCWGRSGRVIEDA-YGR------NGSPMQMM 206 (276)
T ss_dssp HHHHHHHHHTTB--CCHHHHH----H------HHTTTT-------TCCHHHHHHHHHHHHHH-HHH------HCCHHHHH
T ss_pred HHHHHHHhhccc--chHHHHH----H------HHHHhh-------hcchhhhhhccchhHHH-Hhh------ccchhhHH
Confidence 000000000000 0000000 0 000000 00000011110000000 000 01123467
Q ss_pred cccccccEEEEecCCCCccC--CcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhhh
Q 020064 262 DNIRHINATIVQGRYDVCCP--MMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNLIK 328 (331)
Q Consensus 262 ~~i~~~P~l~i~G~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~ 328 (331)
.++ ++|+++++|..|...+ ....+.+.+.+|++++++++++||+++.|+ |+++++.|.+|+++..
T Consensus 207 ~~i-~~P~lv~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~i~~~gH~~~~e~-P~~~~~~i~~Fl~~~~ 273 (276)
T 2wj6_A 207 ANL-TKTRPIRHIFSQPTEPEYEKINSDFAEQHPWFSYAKLGGPTHFPAIDV-PDRAAVHIREFATAIR 273 (276)
T ss_dssp HTC-SSCCCEEEEECCSCSHHHHHHHHHHHHHCTTEEEEECCCSSSCHHHHS-HHHHHHHHHHHHHHHH
T ss_pred hhc-CCCceEEEEecCccchhHHHHHHHHHhhCCCeEEEEeCCCCCcccccC-HHHHHHHHHHHHhhcc
Confidence 788 5999998874433222 344567888899999999999999999997 9999999999998764
|
| >1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-37 Score=241.03 Aligned_cols=254 Identities=16% Similarity=0.178 Sum_probs=159.6
Q ss_pred EEEeCCCCCCCcEEEeccCCCCCCCCC-cccccCCCCcEEEEecCCCCCCCCCCCC--CCccchHHHHHHHHHHHHHhCC
Q 020064 36 YWEQSGNPTGHPVVFLHGGPGGGTTPS-NRRFFDPDFYRIILFDQRGAGKSTPHAC--LDQNTTWDLIDDIEKLRQHLEI 112 (331)
Q Consensus 36 ~~~~~g~~~~~~vl~~HG~~~~~~~~~-~~~~~~~~g~~vi~~D~~G~G~s~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 112 (331)
+|...|+ .+|+|||+||++++...|. ++..+ .++|+|+++|+||||.|+.... ...++++++++|+.++++.++.
T Consensus 12 ~~~~~G~-g~~~vvllHG~~~~~~~w~~~~~~L-~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~ 89 (271)
T 1wom_A 12 HVKVKGS-GKASIMFAPGFGCDQSVWNAVAPAF-EEDHRVILFDYVGSGHSDLRAYDLNRYQTLDGYAQDVLDVCEALDL 89 (271)
T ss_dssp TCEEEEC-CSSEEEEECCTTCCGGGGTTTGGGG-TTTSEEEECCCSCCSSSCCTTCCTTGGGSHHHHHHHHHHHHHHTTC
T ss_pred eeEeecC-CCCcEEEEcCCCCchhhHHHHHHHH-HhcCeEEEECCCCCCCCCCCcccccccccHHHHHHHHHHHHHHcCC
Confidence 3455564 3578999999777655444 44444 5689999999999999986431 1236899999999999999999
Q ss_pred CcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhccc
Q 020064 113 PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKR 192 (331)
Q Consensus 113 ~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (331)
++++|+||||||.+++.+|.++|++|+++|++++.+......... ...........+....... ...+...+...
T Consensus 90 ~~~~lvGhS~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 164 (271)
T 1wom_A 90 KETVFVGHSVGALIGMLASIRRPELFSHLVMVGPSPCYLNDPPEY----YGGFEEEQLLGLLEMMEKN-YIGWATVFAAT 164 (271)
T ss_dssp SCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBEETTTE----ECSBCHHHHHHHHHHHHHC-HHHHHHHHHHH
T ss_pred CCeEEEEeCHHHHHHHHHHHhCHHhhcceEEEcCCCcCCCCCchh----ccCCCHHHHHHHHHHHhhh-HHHHHHHHHHH
Confidence 999999999999999999999999999999999753211000000 0000000000000000000 00000000000
Q ss_pred c-CC-CchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEE
Q 020064 193 L-NS-DDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINAT 270 (331)
Q Consensus 193 ~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l 270 (331)
. .. ............+. . ..+.. ....... .+ ..+....+.++ ++|+|
T Consensus 165 ~~~~~~~~~~~~~~~~~~~------~---~~~~~--------~~~~~~~----~~--------~~~~~~~l~~i-~~P~l 214 (271)
T 1wom_A 165 VLNQPDRPEIKEELESRFC------S---TDPVI--------ARQFAKA----AF--------FSDHREDLSKV-TVPSL 214 (271)
T ss_dssp HHCCTTCHHHHHHHHHHHH------H---SCHHH--------HHHHHHH----HH--------SCCCHHHHTTC-CSCEE
T ss_pred HhcCCCchHHHHHHHHHHh------c---CCcHH--------HHHHHHH----Hh--------CcchHHhcccc-CCCEE
Confidence 0 00 00000000000000 0 00000 0000000 00 12344567888 59999
Q ss_pred EEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhh
Q 020064 271 IVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNLI 327 (331)
Q Consensus 271 ~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 327 (331)
+|+|++|.++|++.++.+.+.+|++++++++++||+++.++ |+++.+.|.+|+++.
T Consensus 215 vi~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~-p~~~~~~i~~fl~~~ 270 (271)
T 1wom_A 215 ILQCADDIIAPATVGKYMHQHLPYSSLKQMEARGHCPHMSH-PDETIQLIGDYLKAH 270 (271)
T ss_dssp EEEEETCSSSCHHHHHHHHHHSSSEEEEEEEEESSCHHHHC-HHHHHHHHHHHHHHH
T ss_pred EEEcCCCCcCCHHHHHHHHHHCCCCEEEEeCCCCcCccccC-HHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999997 999999999999763
|
| >3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-36 Score=235.30 Aligned_cols=258 Identities=16% Similarity=0.190 Sum_probs=169.5
Q ss_pred cceeEeCCCceEEEEeCCCCCCCcEEEeccCCCCCCCC-CcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHH
Q 020064 24 TGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTP-SNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDD 102 (331)
Q Consensus 24 ~~~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~~~-~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~ 102 (331)
..++...+|.+++|...| ++|+||++||++++...| .++..+ .+||+|+++|+||||.|.... .++++++++|
T Consensus 4 ~~~~~~~~g~~l~~~~~g--~~~~vv~lHG~~~~~~~~~~~~~~l-~~~~~vi~~d~~G~G~S~~~~---~~~~~~~~~~ 77 (262)
T 3r0v_A 4 MQTVPSSDGTPIAFERSG--SGPPVVLVGGALSTRAGGAPLAERL-APHFTVICYDRRGRGDSGDTP---PYAVEREIED 77 (262)
T ss_dssp -CEEECTTSCEEEEEEEE--CSSEEEEECCTTCCGGGGHHHHHHH-TTTSEEEEECCTTSTTCCCCS---SCCHHHHHHH
T ss_pred hheEEcCCCcEEEEEEcC--CCCcEEEECCCCcChHHHHHHHHHH-hcCcEEEEEecCCCcCCCCCC---CCCHHHHHHH
Confidence 345677788899999998 588999999987775554 444445 489999999999999998765 6789999999
Q ss_pred HHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchh
Q 020064 103 IEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENER 182 (331)
Q Consensus 103 ~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (331)
+.++++.++ ++++++|||+||.+++.+|.++| +++++|+++++........ .........+.........
T Consensus 78 ~~~~~~~l~-~~~~l~G~S~Gg~ia~~~a~~~p-~v~~lvl~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~ 147 (262)
T 3r0v_A 78 LAAIIDAAG-GAAFVFGMSSGAGLSLLAAASGL-PITRLAVFEPPYAVDDSRP--------PVPPDYQTRLDALLAEGRR 147 (262)
T ss_dssp HHHHHHHTT-SCEEEEEETHHHHHHHHHHHTTC-CEEEEEEECCCCCCSTTSC--------CCCTTHHHHHHHHHHTTCH
T ss_pred HHHHHHhcC-CCeEEEEEcHHHHHHHHHHHhCC-CcceEEEEcCCcccccccc--------hhhhHHHHHHHHHhhccch
Confidence 999999999 99999999999999999999999 9999999998665422100 0001111111111111111
Q ss_pred hhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhcc
Q 020064 183 SCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNID 262 (331)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 262 (331)
......+........ ++.....................................+.
T Consensus 148 ~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 203 (262)
T 3r0v_A 148 GDAVTYFMTEGVGVP------------------------PDLVAQMQQAPMWPGMEAVAHTLPYDHAVMGDNTIPTARFA 203 (262)
T ss_dssp HHHHHHHHHHTSCCC------------------------HHHHHHHHTSTTHHHHHHTGGGHHHHHHHHTTSCCCHHHHT
T ss_pred hhHHHHHhhcccCCC------------------------HHHHHHHHhhhcccchHHHHhhhhhhhhhhhcCCCCHHHcC
Confidence 111111111111111 11111100000000000000000000000000122346788
Q ss_pred ccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHh
Q 020064 263 NIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNL 326 (331)
Q Consensus 263 ~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 326 (331)
++ ++|+|+|+|++|.++|++.++.+.+.++++++++++++||+ ++ ++++.+.|.+|+++
T Consensus 204 ~i-~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~---~~-p~~~~~~i~~fl~~ 262 (262)
T 3r0v_A 204 SI-SIPTLVMDGGASPAWIRHTAQELADTIPNARYVTLENQTHT---VA-PDAIAPVLVEFFTR 262 (262)
T ss_dssp TC-CSCEEEEECTTCCHHHHHHHHHHHHHSTTEEEEECCCSSSS---CC-HHHHHHHHHHHHC-
T ss_pred cC-CCCEEEEeecCCCCCCHHHHHHHHHhCCCCeEEEecCCCcc---cC-HHHHHHHHHHHHhC
Confidence 88 59999999999999999999999999999999999999993 44 99999999999864
|
| >1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-36 Score=241.42 Aligned_cols=257 Identities=19% Similarity=0.234 Sum_probs=165.1
Q ss_pred CCCceEEEEeCCCCCCCcEEEeccCCCCCC-CCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHH
Q 020064 30 SDIHTIYWEQSGNPTGHPVVFLHGGPGGGT-TPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQ 108 (331)
Q Consensus 30 ~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~-~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~ 108 (331)
.+|.+++|...| ++++|||+||++++.. |...+..+.++||+|+++|+||||.|..+. ..++++++++|+.++++
T Consensus 10 ~~g~~l~y~~~g--~~~pvvllHG~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~--~~~~~~~~~~dl~~~l~ 85 (279)
T 1hkh_A 10 STPIELYYEDQG--SGQPVVLIHGYPLDGHSWERQTRELLAQGYRVITYDRRGFGGSSKVN--TGYDYDTFAADLHTVLE 85 (279)
T ss_dssp TEEEEEEEEEES--SSEEEEEECCTTCCGGGGHHHHHHHHHTTEEEEEECCTTSTTSCCCS--SCCSHHHHHHHHHHHHH
T ss_pred CCCeEEEEEecC--CCCcEEEEcCCCchhhHHhhhHHHHHhCCcEEEEeCCCCCCCCCCCC--CCCCHHHHHHHHHHHHH
Confidence 467789999988 5778999999777654 444556666679999999999999998765 46899999999999999
Q ss_pred HhCCCcEEEEEeChhHHHHHHHHHhCCC-ceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHH
Q 020064 109 HLEIPEWQVFGGSWGSTLALAYSLAHPD-KVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVD 187 (331)
Q Consensus 109 ~~~~~~v~lvG~S~Gg~~a~~~a~~~p~-~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (331)
.++.++++|+||||||.+++.+|.++|+ +|+++|++++.......... .........+..+....... ......
T Consensus 86 ~l~~~~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~-~~~~~~ 160 (279)
T 1hkh_A 86 TLDLRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDD----NPEGVPQEVFDGIEAAAKGD-RFAWFT 160 (279)
T ss_dssp HHTCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTT----BTTSBCHHHHHHHHHHHHHC-HHHHHH
T ss_pred hcCCCceEEEEeChhHHHHHHHHHHcCccceeeEEEEccCCcccccCcC----CcCCCcHHHHHHHHHHhhhh-hhhhHH
Confidence 9999999999999999999999999999 99999999975432100000 00000000010000000000 000000
Q ss_pred hhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhc-------CCccHHHHHHhhhhhhhhhccCCCCCcchhhhh
Q 020064 188 AYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKR-------GEDDIFSLAFARIENHYFLNKGFFPSDSFLLDN 260 (331)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (331)
.+. ..+..... .......++.... .........+. .. ..+....
T Consensus 161 ~~~---------------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~-----~~~~~~~ 211 (279)
T 1hkh_A 161 DFY---------------KNFYNLDE-NLGSRISEQAVTGSWNVAIGSAPVAAYAVVP--------AW-----IEDFRSD 211 (279)
T ss_dssp HHH---------------HHHHTHHH-HBTTTBCHHHHHHHHHHHHTSCTTHHHHTHH--------HH-----TCBCHHH
T ss_pred HHH---------------hhhhhccc-CCcccccHHHHHhhhhhhccCcHHHHHHHHH--------HH-----hhchhhh
Confidence 000 00000000 0000000000000 00000000000 00 0112234
Q ss_pred cccc---ccccEEEEecCCCCccCCcch-HHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHh
Q 020064 261 IDNI---RHINATIVQGRYDVCCPMMSA-WDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNL 326 (331)
Q Consensus 261 l~~i---~~~P~l~i~G~~D~~~~~~~~-~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 326 (331)
+.++ + +|+|+|+|++|.++|++.+ +.+.+.+|++++++++++||+++.++ |+++.+.|.+|+++
T Consensus 212 l~~i~~~~-~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~-p~~~~~~i~~fl~~ 279 (279)
T 1hkh_A 212 VEAVRAAG-KPTLILHGTKDNILPIDATARRFHQAVPEADYVEVEGAPHGLLWTH-ADEVNAALKTFLAK 279 (279)
T ss_dssp HHHHHHHC-CCEEEEEETTCSSSCTTTTHHHHHHHCTTSEEEEETTCCTTHHHHT-HHHHHHHHHHHHHC
T ss_pred HHHhccCC-CCEEEEEcCCCccCChHHHHHHHHHhCCCeeEEEeCCCCccchhcC-HHHHHHHHHHHhhC
Confidence 5555 5 9999999999999998887 89999999999999999999999997 99999999999963
|
| >3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-36 Score=237.26 Aligned_cols=264 Identities=14% Similarity=0.126 Sum_probs=173.4
Q ss_pred eeEeCCCceEEEEeCCCCCCCcEEEeccCCCCCC-CCCcccccCC-CCcEEEEecCCCCCCCCCCCCCCccchHHHHHHH
Q 020064 26 ILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGT-TPSNRRFFDP-DFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDI 103 (331)
Q Consensus 26 ~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~-~~~~~~~~~~-~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~ 103 (331)
+++++ |.+++|...| ++|+|||+||++++.. |...+..+.+ .||+|+++|+||||.|..... ++.+++++|+
T Consensus 5 ~~~~~-g~~l~y~~~g--~~~~vv~lhG~~~~~~~~~~~~~~l~~~~g~~v~~~d~~G~G~s~~~~~---~~~~~~~~~~ 78 (272)
T 3fsg_A 5 KEYLT-RSNISYFSIG--SGTPIIFLHGLSLDKQSTCLFFEPLSNVGQYQRIYLDLPGMGNSDPISP---STSDNVLETL 78 (272)
T ss_dssp CCEEC-TTCCEEEEEC--CSSEEEEECCTTCCHHHHHHHHTTSTTSTTSEEEEECCTTSTTCCCCSS---CSHHHHHHHH
T ss_pred EEEec-CCeEEEEEcC--CCCeEEEEeCCCCcHHHHHHHHHHHhccCceEEEEecCCCCCCCCCCCC---CCHHHHHHHH
Confidence 45554 4599999998 6889999999777644 4445555555 699999999999999997763 8999999999
Q ss_pred HHHHHH-hCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchh
Q 020064 104 EKLRQH-LEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENER 182 (331)
Q Consensus 104 ~~~~~~-~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (331)
.++++. ++.++++++||||||.+++.+|.++|++++++|++++.............. .......+...+.....
T Consensus 79 ~~~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 153 (272)
T 3fsg_A 79 IEAIEEIIGARRFILYGHSYGGYLAQAIAFHLKDQTLGVFLTCPVITADHSKRLTGKH-----INILEEDINPVENKEYF 153 (272)
T ss_dssp HHHHHHHHTTCCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECSSCCGGGCCCCCC-----CCEECSCCCCCTTGGGH
T ss_pred HHHHHHHhCCCcEEEEEeCchHHHHHHHHHhChHhhheeEEECcccccCccccccccc-----hhhhhhhhhcccCHHHH
Confidence 999999 888999999999999999999999999999999999876432211100000 00000000111111111
Q ss_pred hhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhcc
Q 020064 183 SCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNID 262 (331)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 262 (331)
. .+..................... ..... ...+...+. .. .....+....+.
T Consensus 154 ~----~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~-~~~~~~~~~-------~~---~~~~~~~~~~~~ 205 (272)
T 3fsg_A 154 A----DFLSMNVIINNQAWHDYQNLIIP-------------GLQKE-DKTFIDQLQ-------NN---YSFTFEEKLKNI 205 (272)
T ss_dssp H----HHHHHCSEESHHHHHHHHHHTHH-------------HHHHC-CHHHHHHHT-------TS---CSCTTHHHHTTC
T ss_pred H----HHHHHhccCCCchhHHHHHHhhh-------------hhhhc-cHHHHHHHh-------hh---cCCChhhhhhhc
Confidence 1 11111111111100000000000 00000 000000000 00 000122223567
Q ss_pred ccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhhhcC
Q 020064 263 NIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNLIKNG 330 (331)
Q Consensus 263 ~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~~~ 330 (331)
++ ++|+|+|+|++|.++|++..+.+.+.++++++++++++||+++.++ ++++.+.|.+|++++...
T Consensus 206 ~~-~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~-~~~~~~~i~~fl~~~~~~ 271 (272)
T 3fsg_A 206 NY-QFPFKIMVGRNDQVVGYQEQLKLINHNENGEIVLLNRTGHNLMIDQ-REAVGFHFDLFLDELNSN 271 (272)
T ss_dssp CC-SSCEEEEEETTCTTTCSHHHHHHHTTCTTEEEEEESSCCSSHHHHT-HHHHHHHHHHHHHHHHC-
T ss_pred cC-CCCEEEEEeCCCCcCCHHHHHHHHHhcCCCeEEEecCCCCCchhcC-HHHHHHHHHHHHHHhhcC
Confidence 88 5999999999999999999999999999999999999999999987 999999999999988654
|
| >2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-35 Score=237.36 Aligned_cols=268 Identities=16% Similarity=0.121 Sum_probs=166.8
Q ss_pred ccceeEeCCCceEEEEeCCCCCCCcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHH
Q 020064 23 STGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDD 102 (331)
Q Consensus 23 ~~~~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~ 102 (331)
+.+++++ +|.+++|...|+..+|+|||+||++++...|......+.++|+|+++|+||||.|+.+. ...++++++++|
T Consensus 22 ~~~~~~~-~g~~l~y~~~G~g~~~~vvllHG~~~~~~~w~~~~~~L~~~~~via~Dl~GhG~S~~~~-~~~~~~~~~a~d 99 (318)
T 2psd_A 22 RCKQMNV-LDSFINYYDSEKHAENAVIFLHGNATSSYLWRHVVPHIEPVARCIIPDLIGMGKSGKSG-NGSYRLLDHYKY 99 (318)
T ss_dssp HCEEEEE-TTEEEEEEECCSCTTSEEEEECCTTCCGGGGTTTGGGTTTTSEEEEECCTTSTTCCCCT-TSCCSHHHHHHH
T ss_pred cceEEee-CCeEEEEEEcCCCCCCeEEEECCCCCcHHHHHHHHHHhhhcCeEEEEeCCCCCCCCCCC-CCccCHHHHHHH
Confidence 3455665 55699999998655569999999877765554444444667899999999999998653 235889999999
Q ss_pred HHHHHHHhCC-CcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcc-
Q 020064 103 IEKLRQHLEI-PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPEN- 180 (331)
Q Consensus 103 ~~~~~~~~~~-~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 180 (331)
+.++++.++. ++++|+||||||.+++.+|.++|++|+++|++++.......... .... ...+..+.......
T Consensus 100 l~~ll~~l~~~~~~~lvGhSmGg~ia~~~A~~~P~~v~~lvl~~~~~~~~~~~~~-----~~~~-~~~~~~~~~~~~~~~ 173 (318)
T 2psd_A 100 LTAWFELLNLPKKIIFVGHDWGAALAFHYAYEHQDRIKAIVHMESVVDVIESWDE-----WPDI-EEDIALIKSEEGEKM 173 (318)
T ss_dssp HHHHHTTSCCCSSEEEEEEEHHHHHHHHHHHHCTTSEEEEEEEEECCSCBSCCTT-----SCSC-HHHHHHHHSTHHHHH
T ss_pred HHHHHHhcCCCCCeEEEEEChhHHHHHHHHHhChHhhheEEEeccccCCccchhh-----hhhH-HHHHHHHhcccchhh
Confidence 9999999999 89999999999999999999999999999998864321100000 0000 00000000000000
Q ss_pred --hhhhhHHhhcccc-CCC-chHHHHHHHHHhhhHHHhhhcCCCCh--h----hhhcC-----CccHHHHHHhhhhhhhh
Q 020064 181 --ERSCFVDAYSKRL-NSD-DKETQYAAARAWTKWEMMTAHLLPNE--E----NIKRG-----EDDIFSLAFARIENHYF 245 (331)
Q Consensus 181 --~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~-----~~~~~~~~~~~~~~~~~ 245 (331)
....+...+.... ... ...........+. .... . ..... ........
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 235 (318)
T 2psd_A 174 VLENNFFVETVLPSKIMRKLEPEEFAAYLEPFK---------EKGEVRRPTLSWPREIPLVKGGKPDVVQI--------- 235 (318)
T ss_dssp HTTTCHHHHTHHHHTCSSCCCHHHHHHHHGGGC---------SSSGGGHHHHHHHHTCCBTTTSCHHHHHH---------
T ss_pred hhcchHHHHhhccccccccCCHHHHHHHHHhhc---------CccccccchhcccccccccccccchhHHH---------
Confidence 0000111111111 011 1111000000000 0000 0 00000 00000000
Q ss_pred hccCCCCCcchhhhhcccc-ccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHH
Q 020064 246 LNKGFFPSDSFLLDNIDNI-RHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLK 324 (331)
Q Consensus 246 ~~~~~~~~~~~~~~~l~~i-~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl 324 (331)
..+..+.+.++ + +|+|+|+|++| ++++ .++.+.+.+|+++++++ ++||+++.++ |+++++.|.+|+
T Consensus 236 --------~~~~~~~l~~i~~-~P~Lvi~G~~D-~~~~-~~~~~~~~~~~~~~~~i-~~gH~~~~e~-p~~~~~~i~~fl 302 (318)
T 2psd_A 236 --------VRNYNAYLRASDD-LPKLFIESDPG-FFSN-AIVEGAKKFPNTEFVKV-KGLHFLQEDA-PDEMGKYIKSFV 302 (318)
T ss_dssp --------HHHHHHHHHTCTT-SCEEEEEEEEC-SSHH-HHHHHHTTSSSEEEEEE-EESSSGGGTC-HHHHHHHHHHHH
T ss_pred --------HHHHHHHhccccC-CCeEEEEeccc-cCcH-HHHHHHHhCCCcEEEEe-cCCCCCHhhC-HHHHHHHHHHHH
Confidence 01122345566 5 99999999999 8887 88889999999999999 6899999997 999999999999
Q ss_pred Hhhhc
Q 020064 325 NLIKN 329 (331)
Q Consensus 325 ~~~~~ 329 (331)
++...
T Consensus 303 ~~~~~ 307 (318)
T 2psd_A 303 ERVLK 307 (318)
T ss_dssp HHHHC
T ss_pred HHhhc
Confidence 87643
|
| >3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-36 Score=235.36 Aligned_cols=256 Identities=12% Similarity=0.102 Sum_probs=167.7
Q ss_pred eeEeCCCceEEEEeCCCCCCCcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHH
Q 020064 26 ILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEK 105 (331)
Q Consensus 26 ~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~ 105 (331)
++++ +|.+++|...|++++|+|||+||++++...|......++++|+|+++|+||||.|..+. ..++++++++|+.+
T Consensus 3 ~~~~-~g~~l~~~~~g~~~~~~vv~lHG~~~~~~~~~~~~~~L~~~~~v~~~D~~G~G~S~~~~--~~~~~~~~~~~~~~ 79 (264)
T 3ibt_A 3 SLNV-NGTLMTYSESGDPHAPTLFLLSGWCQDHRLFKNLAPLLARDFHVICPDWRGHDAKQTDS--GDFDSQTLAQDLLA 79 (264)
T ss_dssp CCEE-TTEECCEEEESCSSSCEEEEECCTTCCGGGGTTHHHHHTTTSEEEEECCTTCSTTCCCC--SCCCHHHHHHHHHH
T ss_pred eEee-CCeEEEEEEeCCCCCCeEEEEcCCCCcHhHHHHHHHHHHhcCcEEEEccccCCCCCCCc--cccCHHHHHHHHHH
Confidence 3455 55699999999877899999999877755544444444667999999999999999764 57899999999999
Q ss_pred HHHHhCCCcEEEEEeChhHHHHHHHHHhC-CCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhh
Q 020064 106 LRQHLEIPEWQVFGGSWGSTLALAYSLAH-PDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSC 184 (331)
Q Consensus 106 ~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~-p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (331)
+++.++.++++++||||||.+++.+|.++ |++++++|++++....... .+..+...........
T Consensus 80 ~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~---------------~~~~~~~~~~~~~~~~ 144 (264)
T 3ibt_A 80 FIDAKGIRDFQMVSTSHGCWVNIDVCEQLGAARLPKTIIIDWLLQPHPG---------------FWQQLAEGQHPTEYVA 144 (264)
T ss_dssp HHHHTTCCSEEEEEETTHHHHHHHHHHHSCTTTSCEEEEESCCSSCCHH---------------HHHHHHHTTCTTTHHH
T ss_pred HHHhcCCCceEEEecchhHHHHHHHHHhhChhhhheEEEecCCCCcChh---------------hcchhhcccChhhHHH
Confidence 99999999999999999999999999999 9999999999987621111 0111100000000000
Q ss_pred hHHhhcccc-CCC-chHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhcc
Q 020064 185 FVDAYSKRL-NSD-DKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNID 262 (331)
Q Consensus 185 ~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 262 (331)
....+...+ ... ........... +.......+............. ..+....+.
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~l~ 200 (264)
T 3ibt_A 145 GRQSFFDEWAETTDNADVLNHLRNE-----------------MPWFHGEMWQRACREIEANYRT-------WGSPLDRMD 200 (264)
T ss_dssp HHHHHHHHHHTTCCCHHHHHHHHHT-----------------GGGSCHHHHHHHHHHHHHHHHH-------HSSHHHHHH
T ss_pred HHHHHHHHhcccCCcHHHHHHHHHh-----------------hhhccchhHHHHHHHhccchhh-------ccchhhccc
Confidence 111111000 000 00000000000 0000000111111111000000 112336788
Q ss_pred ccccccEEEEec--CCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHH
Q 020064 263 NIRHINATIVQG--RYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKN 325 (331)
Q Consensus 263 ~i~~~P~l~i~G--~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~ 325 (331)
++ ++|+|+++| +.|...+++..+.+.+.+|++++++++++||+++.++ |+++.+.|.+||+
T Consensus 201 ~i-~~P~lii~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~-p~~~~~~i~~fl~ 263 (264)
T 3ibt_A 201 SL-PQKPEICHIYSQPLSQDYRQLQLEFAAGHSWFHPRHIPGRTHFPSLEN-PVAVAQAIREFLQ 263 (264)
T ss_dssp TC-SSCCEEEEEECCSCCHHHHHHHHHHHHHCTTEEEEECCCSSSCHHHHC-HHHHHHHHHHHTC
T ss_pred cc-CCCeEEEEecCCccchhhHHHHHHHHHhCCCceEEEcCCCCCcchhhC-HHHHHHHHHHHHh
Confidence 89 599999965 4555555677888999999999999999999999997 9999999999985
|
| >3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-35 Score=237.26 Aligned_cols=259 Identities=22% Similarity=0.286 Sum_probs=173.8
Q ss_pred CCCceEEEEeCCCCCCCcEEEeccCCCCCCCC--CcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHH
Q 020064 30 SDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTP--SNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLR 107 (331)
Q Consensus 30 ~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~~~--~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~ 107 (331)
.+|.+++|...| ++|+|||+||++++...| .....++++||+|+++|+||+|.|.... .++.+++++|+.+++
T Consensus 30 ~~~~~l~y~~~g--~~~~vv~lHG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~---~~~~~~~~~~~~~~l 104 (293)
T 3hss_A 30 FRVINLAYDDNG--TGDPVVFIAGRGGAGRTWHPHQVPAFLAAGYRCITFDNRGIGATENAE---GFTTQTMVADTAALI 104 (293)
T ss_dssp SCEEEEEEEEEC--SSEEEEEECCTTCCGGGGTTTTHHHHHHTTEEEEEECCTTSGGGTTCC---SCCHHHHHHHHHHHH
T ss_pred cccceEEEEEcC--CCCEEEEECCCCCchhhcchhhhhhHhhcCCeEEEEccCCCCCCCCcc---cCCHHHHHHHHHHHH
Confidence 356789999998 689999999977765544 4566677899999999999999998654 578999999999999
Q ss_pred HHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcch--hhhh
Q 020064 108 QHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENE--RSCF 185 (331)
Q Consensus 108 ~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 185 (331)
+.++.++++++|||+||.+++.+|.++|++++++|++++............... ..+........... ....
T Consensus 105 ~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~ 178 (293)
T 3hss_A 105 ETLDIAPARVVGVSMGAFIAQELMVVAPELVSSAVLMATRGRLDRARQFFNKAE------AELYDSGVQLPPTYDARARL 178 (293)
T ss_dssp HHHTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCHHHHHHHHHH------HHHHHHTCCCCHHHHHHHHH
T ss_pred HhcCCCcEEEEeeCccHHHHHHHHHHChHHHHhhheecccccCChhhhHHHHHH------HHHHhhcccchhhHHHHHHH
Confidence 999999999999999999999999999999999999998765432211111000 00000000000000 0000
Q ss_pred HHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccc
Q 020064 186 VDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIR 265 (331)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 265 (331)
...+....... ......+... ....... ....+...+ .. ....+....+.++
T Consensus 179 ~~~~~~~~~~~-----~~~~~~~~~~--~~~~~~~--------~~~~~~~~~-----------~~-~~~~~~~~~l~~i- 230 (293)
T 3hss_A 179 LENFSRKTLND-----DVAVGDWIAM--FSMWPIK--------STPGLRCQL-----------DC-APQTNRLPAYRNI- 230 (293)
T ss_dssp HHHSCHHHHTC-----HHHHHHHHHH--HHHSCCC--------CCHHHHHHH-----------TS-SCSSCCHHHHTTC-
T ss_pred hhhcccccccc-----cccHHHHHHH--Hhhcccc--------ccHHHHhHh-----------hh-ccccchHHHHhhC-
Confidence 00000000000 0000000000 0000000 000000000 00 1134455678889
Q ss_pred cccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhhh
Q 020064 266 HINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNLIK 328 (331)
Q Consensus 266 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~ 328 (331)
++|+|+++|++|.++|++.++.+.+.++++++++++++||+++.++ ++++.+.|.+|++++.
T Consensus 231 ~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~-p~~~~~~i~~fl~~~~ 292 (293)
T 3hss_A 231 AAPVLVIGFADDVVTPPYLGREVADALPNGRYLQIPDAGHLGFFER-PEAVNTAMLKFFASVK 292 (293)
T ss_dssp CSCEEEEEETTCSSSCHHHHHHHHHHSTTEEEEEETTCCTTHHHHS-HHHHHHHHHHHHHTCC
T ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHHCCCceEEEeCCCcchHhhhC-HHHHHHHHHHHHHhcC
Confidence 5999999999999999999999999999999999999999999997 9999999999998865
|
| >3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-36 Score=239.18 Aligned_cols=280 Identities=11% Similarity=0.087 Sum_probs=165.9
Q ss_pred CCCccceeEeCCCceEEEEeCCCCCCCcEEEeccCCCCCCC-CCcccccCCCCcEEEEecCCCCCCCCCCCCC---Cccc
Q 020064 20 EPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTT-PSNRRFFDPDFYRIILFDQRGAGKSTPHACL---DQNT 95 (331)
Q Consensus 20 ~~~~~~~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~~-~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~---~~~~ 95 (331)
...+..++++ +|.+++|...| ++|+|||+||++++... ..++..+ .+||+|+++|+||||.|+..... ..++
T Consensus 11 ~~~~~~~~~~-~g~~l~~~~~g--~~~~vv~lHG~~~~~~~~~~~~~~l-~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~ 86 (306)
T 3r40_A 11 PGFGSEWINT-SSGRIFARVGG--DGPPLLLLHGFPQTHVMWHRVAPKL-AERFKVIVADLPGYGWSDMPESDEQHTPYT 86 (306)
T ss_dssp TTCEEEEECC-TTCCEEEEEEE--CSSEEEEECCTTCCGGGGGGTHHHH-HTTSEEEEECCTTSTTSCCCCCCTTCGGGS
T ss_pred cCCceEEEEe-CCEEEEEEEcC--CCCeEEEECCCCCCHHHHHHHHHHh-ccCCeEEEeCCCCCCCCCCCCCCcccCCCC
Confidence 3455666666 45599999998 68999999998776554 4444445 45999999999999999877631 1578
Q ss_pred hHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhccccc-------CChh
Q 020064 96 TWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAA-------IYPD 168 (331)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~-------~~~~ 168 (331)
++++++|+.++++.++.++++++||||||.+++.+|.++|++++++|++++.................. ....
T Consensus 87 ~~~~~~~~~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (306)
T 3r40_A 87 KRAMAKQLIEAMEQLGHVHFALAGHNRGARVSYRLALDSPGRLSKLAVLDILPTYEYWQRMNRAYALKIYHWSFLAQPAP 166 (306)
T ss_dssp HHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCHHHHHHHCSHHHHHHSTHHHHHTSCTT
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEEecchHHHHHHHHHhChhhccEEEEecCCCCccchhhhhhhhhhhhHHHHHhhcccc
Confidence 999999999999999999999999999999999999999999999999998554321111000000000 0000
Q ss_pred hHHhhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhcc
Q 020064 169 AWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNK 248 (331)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (331)
........ ....+...+........ ......++....+................+...
T Consensus 167 ~~~~~~~~----~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (306)
T 3r40_A 167 LPENLLGG----DPDFYVKAKLASWTRAG------------------DLSAFDPRAVEHYRIAFADPMRRHVMCEDYRAG 224 (306)
T ss_dssp HHHHHHTS----CHHHHHHHHHHHTSSSS------------------SSTTSCHHHHHHHHHHHTSHHHHHHHHHHHHHH
T ss_pred hHHHHHcC----CHHHHHHHHhhcccCCC------------------ccccCCHHHHHHHHHHHccCCCcchhhHHHHhc
Confidence 00000000 00011111111110000 000001111100000000000000000000000
Q ss_pred CCCC--CcchhhhhccccccccEEEEecCCCCccC-CcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHH
Q 020064 249 GFFP--SDSFLLDNIDNIRHINATIVQGRYDVCCP-MMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKN 325 (331)
Q Consensus 249 ~~~~--~~~~~~~~l~~i~~~P~l~i~G~~D~~~~-~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~ 325 (331)
.... ........+.++ ++|+|+|+|++|.+++ ....+.+.+..++++++++ ++||+++.++ ++++.+.|.+||+
T Consensus 225 ~~~~~~~~~~~~~~l~~i-~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~-~~gH~~~~e~-p~~~~~~i~~fl~ 301 (306)
T 3r40_A 225 AYADFEHDKIDVEAGNKI-PVPMLALWGASGIAQSAATPLDVWRKWASDVQGAPI-ESGHFLPEEA-PDQTAEALVRFFS 301 (306)
T ss_dssp HTHHHHHHHHHHHHTCCB-CSCEEEEEETTCC------CHHHHHHHBSSEEEEEE-SSCSCHHHHS-HHHHHHHHHHHHH
T ss_pred ccccchhhhhhhhhccCC-CcceEEEEecCCcccCchhHHHHHHhhcCCCeEEEe-cCCcCchhhC-hHHHHHHHHHHHH
Confidence 0000 000111256888 5999999999999999 6677777788899999999 6899999997 9999999999998
Q ss_pred hhh
Q 020064 326 LIK 328 (331)
Q Consensus 326 ~~~ 328 (331)
+..
T Consensus 302 ~~~ 304 (306)
T 3r40_A 302 AAP 304 (306)
T ss_dssp C--
T ss_pred hcc
Confidence 764
|
| >1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-34 Score=232.57 Aligned_cols=278 Identities=15% Similarity=0.130 Sum_probs=174.1
Q ss_pred cceeEeCCCceEEEEeCCCCCCCcEEEeccCCCCCCC-CCcccccCCCCcEEEEecCCCCCCCCCCCC--CCccchHHHH
Q 020064 24 TGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTT-PSNRRFFDPDFYRIILFDQRGAGKSTPHAC--LDQNTTWDLI 100 (331)
Q Consensus 24 ~~~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~~-~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~--~~~~~~~~~~ 100 (331)
..++.. +|.+++|...| ++|+|||+||++++... ..++..+ .++|+|+++|+||||.|..+.. ...+++++++
T Consensus 11 ~~~~~~-~g~~l~~~~~g--~~~~vv~lHG~~~~~~~~~~~~~~L-~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~ 86 (302)
T 1mj5_A 11 KKFIEI-KGRRMAYIDEG--TGDPILFQHGNPTSSYLWRNIMPHC-AGLGRLIACDLIGMGDSDKLDPSGPERYAYAEHR 86 (302)
T ss_dssp CEEEEE-TTEEEEEEEES--CSSEEEEECCTTCCGGGGTTTGGGG-TTSSEEEEECCTTSTTSCCCSSCSTTSSCHHHHH
T ss_pred ceEEEE-CCEEEEEEEcC--CCCEEEEECCCCCchhhhHHHHHHh-ccCCeEEEEcCCCCCCCCCCCCCCcccccHHHHH
Confidence 445555 56699999998 48999999997776554 4444444 5568999999999999986641 1238999999
Q ss_pred HHHHHHHHHhCC-CcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCc
Q 020064 101 DDIEKLRQHLEI-PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPE 179 (331)
Q Consensus 101 ~~~~~~~~~~~~-~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (331)
+|+.++++.++. ++++++||||||.+++.+|.++|++|+++|++++......... ........+..+......
T Consensus 87 ~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~ 160 (302)
T 1mj5_A 87 DYLDALWEALDLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPIEWAD------FPEQDRDLFQAFRSQAGE 160 (302)
T ss_dssp HHHHHHHHHTTCTTCEEEEEEHHHHHHHHHHHHHTGGGEEEEEEEEECCSCBCGGG------SCGGGHHHHHHHHSTTHH
T ss_pred HHHHHHHHHhCCCceEEEEEECCccHHHHHHHHHCHHHHhheeeecccCCchhhhh------hhHHHHHHHHHHhccchh
Confidence 999999999999 9999999999999999999999999999999998764211000 000000011111000000
Q ss_pred ---chhhhhHHhhccccC-CC-chHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCc
Q 020064 180 ---NERSCFVDAYSKRLN-SD-DKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSD 254 (331)
Q Consensus 180 ---~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (331)
.....+...+..... .. ...........+.. ....... ....+.......... ......
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~--------~~~~~~~~~~~~~~~-~~~~~~ 224 (302)
T 1mj5_A 161 ELVLQDNVFVEQVLPGLILRPLSEAEMAAYREPFLA-------AGEARRP--------TLSWPRQIPIAGTPA-DVVAIA 224 (302)
T ss_dssp HHHTTTCHHHHTHHHHTSSSCCCHHHHHHHHGGGCS-------SSGGGHH--------HHHTGGGSCBTTBSH-HHHHHH
T ss_pred hhhcChHHHHHHHHHhcCcccCCHHHHHHHHHHhhc-------ccccccc--------hHHHHHhccccccch-hhHHHH
Confidence 000112222221111 11 11111110000000 0000000 000000000000000 000002
Q ss_pred chhhhhccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhhhcCC
Q 020064 255 SFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNLIKNGH 331 (331)
Q Consensus 255 ~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~~~~ 331 (331)
.+....+.++ ++|+|+|+|++|.++|++.++.+.+.+++ +++++ ++||+++.++ ++++.+.|.+|+++..+++
T Consensus 225 ~~~~~~l~~i-~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~-~~gH~~~~e~-p~~~~~~i~~fl~~~~~~~ 297 (302)
T 1mj5_A 225 RDYAGWLSES-PIPKLFINAEPGALTTGRMRDFCRTWPNQ-TEITV-AGAHFIQEDS-PDEIGAAIAAFVRRLRPAH 297 (302)
T ss_dssp HHHHHHHTTC-CSCEEEEEEEECSSSSHHHHHHHTTCSSE-EEEEE-EESSCGGGTC-HHHHHHHHHHHHHHHSCCC
T ss_pred HHHHhhhhcc-CCCeEEEEeCCCCCCChHHHHHHHHhcCC-ceEEe-cCcCcccccC-HHHHHHHHHHHHHhhcccc
Confidence 2345577888 59999999999999999999999999999 99999 9999999997 9999999999999887653
|
| >2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-35 Score=236.59 Aligned_cols=261 Identities=16% Similarity=0.085 Sum_probs=172.5
Q ss_pred CCCccceeEeCCCceEEEEeCCCCCCCcEEEeccCCCCCCC-CCcccccCCCCcEEEEecCCCC-CCCCCCCCCCccchH
Q 020064 20 EPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTT-PSNRRFFDPDFYRIILFDQRGA-GKSTPHACLDQNTTW 97 (331)
Q Consensus 20 ~~~~~~~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~~-~~~~~~~~~~g~~vi~~D~~G~-G~s~~~~~~~~~~~~ 97 (331)
.+.+..++++++| +++|...|++++|+|||+||++++... ...+..+ .+||+|+++|+||+ |.|..+. ..++.+
T Consensus 43 ~~~~~~~v~~~~~-~~~~~~~g~~~~~~vv~lHG~~~~~~~~~~~~~~L-~~g~~vi~~D~~G~gG~s~~~~--~~~~~~ 118 (306)
T 2r11_A 43 VRCKSFYISTRFG-QTHVIASGPEDAPPLVLLHGALFSSTMWYPNIADW-SSKYRTYAVDIIGDKNKSIPEN--VSGTRT 118 (306)
T ss_dssp SCCEEEEECCTTE-EEEEEEESCTTSCEEEEECCTTTCGGGGTTTHHHH-HHHSEEEEECCTTSSSSCEECS--CCCCHH
T ss_pred CCcceEEEecCCc-eEEEEeeCCCCCCeEEEECCCCCCHHHHHHHHHHH-hcCCEEEEecCCCCCCCCCCCC--CCCCHH
Confidence 4566778888877 899988887778999999997776544 4445555 45999999999999 8887654 367899
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccC
Q 020064 98 DLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLI 177 (331)
Q Consensus 98 ~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (331)
++++|+.++++.++.++++|+|||+||.+++.+|..+|++|+++|++++......... ..........
T Consensus 119 ~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~------------~~~~~~~~~~ 186 (306)
T 2r11_A 119 DYANWLLDVFDNLGIEKSHMIGLSLGGLHTMNFLLRMPERVKSAAILSPAETFLPFHH------------DFYKYALGLT 186 (306)
T ss_dssp HHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSSBTSCCCH------------HHHHHHHTTT
T ss_pred HHHHHHHHHHHhcCCCceeEEEECHHHHHHHHHHHhCccceeeEEEEcCccccCcccH------------HHHHHHhHHH
Confidence 9999999999999999999999999999999999999999999999998765321100 0000000000
Q ss_pred CcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchh
Q 020064 178 PENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFL 257 (331)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (331)
.......+...+............. .......+... ...+............
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 238 (306)
T 2r11_A 187 ASNGVETFLNWMMNDQNVLHPIFVK---------------------------QFKAGVMWQDG-SRNPNPNADGFPYVFT 238 (306)
T ss_dssp STTHHHHHHHHHTTTCCCSCHHHHH---------------------------HHHHHHHCCSS-SCCCCCCTTSSSCBCC
T ss_pred HHHHHHHHHHHhhCCcccccccccc---------------------------ccHHHHHHHHh-hhhhhhhccCCCCCCC
Confidence 0000001111110000000000000 00000000000 0000000000001234
Q ss_pred hhhccccccccEEEEecCCCCccCCcchHHHH-HhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHh
Q 020064 258 LDNIDNIRHINATIVQGRYDVCCPMMSAWDLH-KAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNL 326 (331)
Q Consensus 258 ~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~-~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 326 (331)
...+.++ ++|+|+++|++|.++|++.++++. +.++++++++++++||+++.++ ++++.+.|.+||++
T Consensus 239 ~~~l~~i-~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~-p~~~~~~i~~fl~~ 306 (306)
T 2r11_A 239 DEELRSA-RVPILLLLGEHEVIYDPHSALHRASSFVPDIEAEVIKNAGHVLSMEQ-PTYVNERVMRFFNA 306 (306)
T ss_dssp HHHHHTC-CSCEEEEEETTCCSSCHHHHHHHHHHHSTTCEEEEETTCCTTHHHHS-HHHHHHHHHHHHC-
T ss_pred HHHHhcC-CCCEEEEEeCCCcccCHHHHHHHHHHHCCCCEEEEeCCCCCCCcccC-HHHHHHHHHHHHhC
Confidence 4578888 599999999999999988777444 5689999999999999999997 99999999999863
|
| >2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-35 Score=232.52 Aligned_cols=280 Identities=15% Similarity=0.133 Sum_probs=174.7
Q ss_pred CCC-ccceeEeCCCceEEEEeCCCCCCCcEEEeccCCCCCCCC-CcccccCCCCcEEEEecCCCCCCCCCCCC--CCccc
Q 020064 20 EPY-STGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTP-SNRRFFDPDFYRIILFDQRGAGKSTPHAC--LDQNT 95 (331)
Q Consensus 20 ~~~-~~~~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~~~-~~~~~~~~~g~~vi~~D~~G~G~s~~~~~--~~~~~ 95 (331)
.|+ +..+++. +|.+++|...| ++|+|||+||++++...| .++..+ .++|+|+++|+||||.|..... ...++
T Consensus 5 ~p~~~~~~~~~-~g~~l~~~~~g--~~~~vv~lHG~~~~~~~~~~~~~~l-~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 80 (297)
T 2qvb_A 5 EPYGQPKYLEI-AGKRMAYIDEG--KGDAIVFQHGNPTSSYLWRNIMPHL-EGLGRLVACDLIGMGASDKLSPSGPDRYS 80 (297)
T ss_dssp SCSSCCEEEEE-TTEEEEEEEES--SSSEEEEECCTTCCGGGGTTTGGGG-TTSSEEEEECCTTSTTSCCCSSCSTTSSC
T ss_pred ccCCCceEEEE-CCEEEEEEecC--CCCeEEEECCCCchHHHHHHHHHHH-hhcCeEEEEcCCCCCCCCCCCCccccCcC
Confidence 344 4556666 56699999998 479999999987765544 444444 5679999999999999986641 12279
Q ss_pred hHHHHHHHHHHHHHhCC-CcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhh
Q 020064 96 TWDLIDDIEKLRQHLEI-PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFR 174 (331)
Q Consensus 96 ~~~~~~~~~~~~~~~~~-~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (331)
++++++|+.++++.++. ++++++||||||.+++.+|.++|++++++|++++......... ........+..+.
T Consensus 81 ~~~~~~~~~~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~------~~~~~~~~~~~~~ 154 (297)
T 2qvb_A 81 YGEQRDFLFALWDALDLGDHVVLVLHDWGSALGFDWANQHRDRVQGIAFMEAIVTPMTWAD------WPPAVRGVFQGFR 154 (297)
T ss_dssp HHHHHHHHHHHHHHTTCCSCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECCSCBCGGG------SCGGGHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCCCCceEEEEeCchHHHHHHHHHhChHhhheeeEeccccCCccCCC------CChHHHHHHHHHh
Confidence 99999999999999999 9999999999999999999999999999999998664211000 0000000011110
Q ss_pred ccCCc---chhhhhHHhhccccC-CC-chHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccC
Q 020064 175 DLIPE---NERSCFVDAYSKRLN-SD-DKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKG 249 (331)
Q Consensus 175 ~~~~~---~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (331)
..... .....+...+..... .. ...........+ .. +. .........+.......... .
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~-~~----~~~~~~~~~~~~~~~~~~~~-~ 218 (297)
T 2qvb_A 155 SPQGEPMALEHNIFVERVLPGAILRQLSDEEMNHYRRPF----------VN-GG----EDRRPTLSWPRNLPIDGEPA-E 218 (297)
T ss_dssp STTHHHHHHTTCHHHHTHHHHTCSSCCCHHHHHHHHGGG----------CS-SS----GGGHHHHHHHHHSCBTTBSH-H
T ss_pred cccchhhhccccHHHHHHHhccccccCCHHHHHHHHHHh----------cC-cc----cchhhHHHHHHhccccCCch-h
Confidence 00000 000011111111111 11 111110000000 00 00 00000000000000000000 0
Q ss_pred CCCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhhhc
Q 020064 250 FFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNLIKN 329 (331)
Q Consensus 250 ~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~~ 329 (331)
......+....+.++ ++|+|+|+|++|.++|++..+.+.+.+++ +++++ ++||+++.++ ++++.+.|.+|++++.+
T Consensus 219 ~~~~~~~~~~~l~~i-~~P~lii~G~~D~~~~~~~~~~~~~~~~~-~~~~~-~~gH~~~~~~-p~~~~~~i~~fl~~~~~ 294 (297)
T 2qvb_A 219 VVALVNEYRSWLEET-DMPKLFINAEPGAIITGRIRDYVRSWPNQ-TEITV-PGVHFVQEDS-PEEIGAAIAQFVRRLRS 294 (297)
T ss_dssp HHHHHHHHHHHHHHC-CSCEEEEEEEECSSSCHHHHHHHHTSSSE-EEEEE-EESSCGGGTC-HHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHhhcccc-cccEEEEecCCCCcCCHHHHHHHHHHcCC-eEEEe-cCccchhhhC-HHHHHHHHHHHHHHHhh
Confidence 000022345567788 59999999999999999999999999999 99999 9999999997 99999999999998753
|
| >2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-35 Score=240.66 Aligned_cols=123 Identities=23% Similarity=0.323 Sum_probs=104.1
Q ss_pred ccceeEeCCCceEEEEeCCCCCCCcEEEeccCCCCCCCC-CcccccCCCCcEEEEecCCCCCCCCCC--CCCCccchHHH
Q 020064 23 STGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTP-SNRRFFDPDFYRIILFDQRGAGKSTPH--ACLDQNTTWDL 99 (331)
Q Consensus 23 ~~~~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~~~-~~~~~~~~~g~~vi~~D~~G~G~s~~~--~~~~~~~~~~~ 99 (331)
+..++.. +|.+++|...| ++|+|||+||++++...| ..+..+.++||+||++|+||||.|+.+ .....++++++
T Consensus 12 ~~~~~~~-~g~~l~y~~~G--~g~~vvllHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~ 88 (328)
T 2cjp_A 12 EHKMVAV-NGLNMHLAELG--EGPTILFIHGFPELWYSWRHQMVYLAERGYRAVAPDLRGYGDTTGAPLNDPSKFSILHL 88 (328)
T ss_dssp EEEEEEE-TTEEEEEEEEC--SSSEEEEECCTTCCGGGGHHHHHHHHTTTCEEEEECCTTSTTCBCCCTTCGGGGSHHHH
T ss_pred heeEecC-CCcEEEEEEcC--CCCEEEEECCCCCchHHHHHHHHHHHHCCcEEEEECCCCCCCCCCcCcCCcccccHHHH
Confidence 3445555 56699999988 578999999987765544 455666678999999999999999866 33346889999
Q ss_pred HHHHHHHHHHhC--CCcEEEEEeChhHHHHHHHHHhCCCceeeEEEecccc
Q 020064 100 IDDIEKLRQHLE--IPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFL 148 (331)
Q Consensus 100 ~~~~~~~~~~~~--~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~ 148 (331)
++|+.++++.++ .++++|+||||||.+++.+|.++|++|+++|+++++.
T Consensus 89 a~dl~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~ 139 (328)
T 2cjp_A 89 VGDVVALLEAIAPNEEKVFVVAHDWGALIAWHLCLFRPDKVKALVNLSVHF 139 (328)
T ss_dssp HHHHHHHHHHHCTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCC
T ss_pred HHHHHHHHHHhcCCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEEccCC
Confidence 999999999999 9999999999999999999999999999999998654
|
| >3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-36 Score=237.91 Aligned_cols=277 Identities=15% Similarity=0.168 Sum_probs=166.1
Q ss_pred CccceeEeCCCceEEEEeCCCCCCCcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCC---CccchHH
Q 020064 22 YSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACL---DQNTTWD 98 (331)
Q Consensus 22 ~~~~~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~---~~~~~~~ 98 (331)
++.+++++++. +++|...| ++++|||+||++++...|......+.++|+|+++|+||||.|..+... ..++.+.
T Consensus 5 ~~~~~~~~~~~-~~~~~~~g--~g~~~vllHG~~~~~~~w~~~~~~l~~~~~vi~~Dl~G~G~s~~~~~~~~~~~~~~~~ 81 (291)
T 3qyj_A 5 FEQTIVDTTEA-RINLVKAG--HGAPLLLLHGYPQTHVMWHKIAPLLANNFTVVATDLRGYGDSSRPASVPHHINYSKRV 81 (291)
T ss_dssp CEEEEEECSSC-EEEEEEEC--CSSEEEEECCTTCCGGGGTTTHHHHTTTSEEEEECCTTSTTSCCCCCCGGGGGGSHHH
T ss_pred cceeEEecCCe-EEEEEEcC--CCCeEEEECCCCCCHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccccccCHHH
Confidence 45667777554 99999988 689999999988876655555555578999999999999999866532 2478999
Q ss_pred HHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCC
Q 020064 99 LIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIP 178 (331)
Q Consensus 99 ~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (331)
+++|+.++++.++.++++++||||||.+++.+|.++|++++++|++++.+....... .........+..+....+
T Consensus 82 ~~~~~~~~~~~l~~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~ 156 (291)
T 3qyj_A 82 MAQDQVEVMSKLGYEQFYVVGHDRGARVAHRLALDHPHRVKKLALLDIAPTHKMYRT-----TDQEFATAYYHWFFLIQP 156 (291)
T ss_dssp HHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCHHHHHHT-----CCHHHHHHTTHHHHTTCS
T ss_pred HHHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHHhCchhccEEEEECCCCcchhhhc-----chhhhhHHHHHHHHhccC
Confidence 999999999999999999999999999999999999999999999987543211000 000000000000000000
Q ss_pred cchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhh-----hhhhhhhccCCCCC
Q 020064 179 ENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFAR-----IENHYFLNKGFFPS 253 (331)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 253 (331)
......... .............+. .......++.+..+ ...+.. .....+........
T Consensus 157 ~~~~~~~~~-------~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (291)
T 3qyj_A 157 DNLPETLIG-------ANPEYYLRKCLEKWG-----KDFSAFHPQALAEY-----IRCFSQPAVIHATCEDYRAAATIDL 219 (291)
T ss_dssp TTHHHHHHH-------TCHHHHHHHHHHHHC-----SCGGGSCHHHHHHH-----HHHHTSHHHHHHHHHHHHHHTTHHH
T ss_pred CCchHHHHc-------CCHHHHHHHHHHhcC-----CCcccCCHHHHHHH-----HHHhcCCCcchhHHHHHHcccccch
Confidence 000000000 000000000000000 00000111111110 000000 00000100000000
Q ss_pred cchhhhhccccccccEEEEecCCCCccC-CcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHh
Q 020064 254 DSFLLDNIDNIRHINATIVQGRYDVCCP-MMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNL 326 (331)
Q Consensus 254 ~~~~~~~l~~i~~~P~l~i~G~~D~~~~-~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 326 (331)
..+..+.+.++ ++|+|+|+|++|.+.+ ......+.+..++.+..+++ +||+++.|+ |+++++.|.+||+.
T Consensus 220 ~~~~~~~~~~i-~~P~Lvi~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~-~GH~~~~E~-P~~v~~~i~~fL~~ 290 (291)
T 3qyj_A 220 EHDELDMKQKI-SCPVLVLWGEKGIIGRKYDVLATWRERAIDVSGQSLP-CGHFLPEEA-PEETYQAIYNFLTH 290 (291)
T ss_dssp HHHHTTTTCCB-CSCEEEEEETTSSHHHHSCHHHHHHTTBSSEEEEEES-SSSCHHHHS-HHHHHHHHHHHHHC
T ss_pred hhcchhcCCcc-ccceEEEecccccccchhhHHHHHHhhcCCcceeecc-CCCCchhhC-HHHHHHHHHHHHhc
Confidence 11222356788 6999999999998754 33455566666888888886 999999997 99999999999974
|
| >4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-36 Score=237.70 Aligned_cols=226 Identities=15% Similarity=0.047 Sum_probs=153.2
Q ss_pred CCCcEEEeccCCCCCC-CCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHh--CCCcEEEEEe
Q 020064 44 TGHPVVFLHGGPGGGT-TPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHL--EIPEWQVFGG 120 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~-~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~lvG~ 120 (331)
+++.|||+||++++.. |..++..|.++||+|+++|+||||.|.... ..++++++++|+.++++.+ +.++++|+||
T Consensus 50 ~~~~VlllHG~~~s~~~~~~la~~La~~Gy~Via~Dl~GhG~S~~~~--~~~~~~~~~~d~~~~~~~l~~~~~~v~lvG~ 127 (281)
T 4fbl_A 50 SRIGVLVSHGFTGSPQSMRFLAEGFARAGYTVATPRLTGHGTTPAEM--AASTASDWTADIVAAMRWLEERCDVLFMTGL 127 (281)
T ss_dssp SSEEEEEECCTTCCGGGGHHHHHHHHHTTCEEEECCCTTSSSCHHHH--HTCCHHHHHHHHHHHHHHHHHHCSEEEEEEE
T ss_pred CCceEEEECCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCccc--cCCCHHHHHHHHHHHHHHHHhCCCeEEEEEE
Confidence 3556999999877644 555677777889999999999999996443 3567889999999999987 5679999999
Q ss_pred ChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhccccCCCchHH
Q 020064 121 SWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKET 200 (331)
Q Consensus 121 S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (331)
||||.+++.+|.++|++|+++|+++++............. ....+... ..+...... .......
T Consensus 128 S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~--~~~~~~~~----~~~~~~~~~----~~~~~~~------ 191 (281)
T 4fbl_A 128 SMGGALTVWAAGQFPERFAGIMPINAALRMESPDLAALAF--NPDAPAEL----PGIGSDIKA----EGVKELA------ 191 (281)
T ss_dssp THHHHHHHHHHHHSTTTCSEEEEESCCSCCCCHHHHHHHT--CTTCCSEE----ECCCCCCSS----TTCCCCC------
T ss_pred CcchHHHHHHHHhCchhhhhhhcccchhcccchhhHHHHH--hHhhHHhh----hcchhhhhh----HHHHHhh------
Confidence 9999999999999999999999999875432211100000 00000000 000000000 0000000
Q ss_pred HHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCCCcc
Q 020064 201 QYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCC 280 (331)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~ 280 (331)
.. ......... +... .......+.+| ++|+|+|+|++|.++
T Consensus 192 -------------------~~-----~~~~~~~~~-~~~~-------------~~~~~~~l~~i-~~P~Lii~G~~D~~v 232 (281)
T 4fbl_A 192 -------------------YP-----VTPVPAIKH-LITI-------------GAVAEMLLPRV-KCPALIIQSREDHVV 232 (281)
T ss_dssp -------------------CS-----EEEGGGHHH-HHHH-------------HHHHHHHGGGC-CSCEEEEEESSCSSS
T ss_pred -------------------hc-----cCchHHHHH-HHHh-------------hhhcccccccc-CCCEEEEEeCCCCCc
Confidence 00 000000000 0000 11223467888 599999999999999
Q ss_pred CCcchHHHHHhCCC--CcEEEecCCCCCCCcCCchhHHHHHHHHHHHh
Q 020064 281 PMMSAWDLHKAWPE--ADFKVVADAGHSANEPGIAAELVATNEKLKNL 326 (331)
Q Consensus 281 ~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 326 (331)
|++.++.+.+.+++ +++++++++||.++.+..++++.+.|.+||++
T Consensus 233 ~~~~~~~l~~~l~~~~~~l~~~~~~gH~~~~e~~~e~v~~~i~~FL~~ 280 (281)
T 4fbl_A 233 PPHNGELIYNGIGSTEKELLWLENSYHVATLDNDKELILERSLAFIRK 280 (281)
T ss_dssp CTHHHHHHHHHCCCSSEEEEEESSCCSCGGGSTTHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHhCCCCCcEEEEECCCCCcCccccCHHHHHHHHHHHHHh
Confidence 99999999999854 58899999999998875599999999999986
|
| >1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-36 Score=233.89 Aligned_cols=253 Identities=21% Similarity=0.271 Sum_probs=154.4
Q ss_pred eEEEEeCCCCCCC-cEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCC
Q 020064 34 TIYWEQSGNPTGH-PVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEI 112 (331)
Q Consensus 34 ~l~~~~~g~~~~~-~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (331)
+++|...| ++| +|||+||++++...|......+.++|+|+++|+||||.|.... .++++++++++. +.++
T Consensus 3 ~l~~~~~G--~g~~~vvllHG~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~---~~~~~~~~~~l~---~~l~- 73 (258)
T 1m33_A 3 NIWWQTKG--QGNVHLVLLHGWGLNAEVWRCIDEELSSHFTLHLVDLPGFGRSRGFG---ALSLADMAEAVL---QQAP- 73 (258)
T ss_dssp CCCEEEEC--CCSSEEEEECCTTCCGGGGGGTHHHHHTTSEEEEECCTTSTTCCSCC---CCCHHHHHHHHH---TTSC-
T ss_pred ceEEEEec--CCCCeEEEECCCCCChHHHHHHHHHhhcCcEEEEeeCCCCCCCCCCC---CcCHHHHHHHHH---HHhC-
Confidence 57888888 467 9999999877655444333334578999999999999998662 577888777664 4455
Q ss_pred CcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhccc
Q 020064 113 PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKR 192 (331)
Q Consensus 113 ~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (331)
++++|+||||||.+++.+|.++|++|+++|++++.+.......+ ....+..+..+...+.. ........+...
T Consensus 74 ~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 146 (258)
T 1m33_A 74 DKAIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARDEW------PGIKPDVLAGFQQQLSD-DQQRTVERFLAL 146 (258)
T ss_dssp SSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBCBTTB------CSBCHHHHHHHHHHHHH-HHHHHHHHHHHT
T ss_pred CCeEEEEECHHHHHHHHHHHHhhHhhceEEEECCCCCccccccc------cCCCHHHHHHHHHHHhc-cHHHHHHHHHHH
Confidence 89999999999999999999999999999999875322110000 00000001111000000 000000111000
Q ss_pred cCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEE
Q 020064 193 LNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIV 272 (331)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i 272 (331)
....... .......+... .......... .+...+... . ..+....+.++ ++|+|+|
T Consensus 147 ~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~--------~~~~~~~~~-----~-------~~~~~~~l~~i-~~P~l~i 202 (258)
T 1m33_A 147 QTMGTET-ARQDARALKKT--VLALPMPEVD--------VLNGGLEIL-----K-------TVDLRQPLQNV-SMPFLRL 202 (258)
T ss_dssp TSTTSTT-HHHHHHHHHHH--HHTSCCCCHH--------HHHHHHHHH-----H-------HCCCTTGGGGC-CSCEEEE
T ss_pred HhcCCcc-chhhHHHHHHH--HHhccCCcHH--------HHHHHHHHH-----H-------hCCHHHHHhhC-CCCEEEE
Confidence 0000000 00000000000 0000000000 000000000 0 11234467788 5999999
Q ss_pred ecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhh
Q 020064 273 QGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNLI 327 (331)
Q Consensus 273 ~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 327 (331)
+|++|.++|++.++.+.+.+|++++++++++||+++.++ |+++.+.|.+|++++
T Consensus 203 ~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~-p~~~~~~i~~fl~~~ 256 (258)
T 1m33_A 203 YGYLDGLVPRKVVPMLDKLWPHSESYIFAKAAHAPFISH-PAEFCHLLVALKQRV 256 (258)
T ss_dssp EETTCSSSCGGGCC-CTTTCTTCEEEEETTCCSCHHHHS-HHHHHHHHHHHHTTS
T ss_pred eecCCCCCCHHHHHHHHHhCccceEEEeCCCCCCccccC-HHHHHHHHHHHHHhc
Confidence 999999999998888988899999999999999999997 999999999999765
|
| >4g9e_A AHL-lactonase, alpha/beta hydrolase fold protein; AHL-binding; HET: C4L; 1.09A {Ochrobactrum} PDB: 4g5x_A* 4g8b_A* 4g8d_A 4g8c_A* 4g9g_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-36 Score=237.95 Aligned_cols=267 Identities=18% Similarity=0.214 Sum_probs=177.6
Q ss_pred CCccceeEeCCCceEEEEeCCCCCCCcEEEeccCCCCCCC-CCcccccCCCCcEEEEecCCCCCCCCCCCC-CCccchHH
Q 020064 21 PYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTT-PSNRRFFDPDFYRIILFDQRGAGKSTPHAC-LDQNTTWD 98 (331)
Q Consensus 21 ~~~~~~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~~-~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~-~~~~~~~~ 98 (331)
..+..++++++| +++|...++ ++|+|||+||++++... ...+..++++||+|+++|+||||.|..... ...+++++
T Consensus 2 ~~~~~~~~~~~~-~~~~~~~~~-~~~~vv~lHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~ 79 (279)
T 4g9e_A 2 TINYHELETSHG-RIAVRESEG-EGAPLLMIHGNSSSGAIFAPQLEGEIGKKWRVIAPDLPGHGKSTDAIDPDRSYSMEG 79 (279)
T ss_dssp CCEEEEEEETTE-EEEEEECCC-CEEEEEEECCTTCCGGGGHHHHHSHHHHHEEEEEECCTTSTTSCCCSCHHHHSSHHH
T ss_pred ceEEEEEEcCCc-eEEEEecCC-CCCeEEEECCCCCchhHHHHHHhHHHhcCCeEEeecCCCCCCCCCCCCcccCCCHHH
Confidence 356788999998 899988875 67899999997776554 445555577899999999999999987531 13578999
Q ss_pred HHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCC
Q 020064 99 LIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIP 178 (331)
Q Consensus 99 ~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (331)
+++++.++++.++.++++++|||+||.+++.+|.++|+ +.++|+++++............. .............
T Consensus 80 ~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~-~~~~vl~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 153 (279)
T 4g9e_A 80 YADAMTEVMQQLGIADAVVFGWSLGGHIGIEMIARYPE-MRGLMITGTPPVAREEVGQGFKS-----GPDMALAGQEIFS 153 (279)
T ss_dssp HHHHHHHHHHHHTCCCCEEEEETHHHHHHHHHTTTCTT-CCEEEEESCCCCCGGGHHHHBCC-----STTGGGGGCSCCC
T ss_pred HHHHHHHHHHHhCCCceEEEEECchHHHHHHHHhhCCc-ceeEEEecCCCCCCCccchhhcc-----chhhhhcCccccc
Confidence 99999999999999999999999999999999999998 88889888766543222100000 0000000001111
Q ss_pred cchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhh
Q 020064 179 ENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLL 258 (331)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (331)
......+....... ........ ................. ... ...+..
T Consensus 154 ~~~~~~~~~~~~~~---~~~~~~~~--------------------~~~~~~~~~~~~~~~~~----~~~-----~~~~~~ 201 (279)
T 4g9e_A 154 ERDVESYARSTCGE---PFEASLLD--------------------IVARTDGRARRIMFEKF----GSG-----TGGNQR 201 (279)
T ss_dssp HHHHHHHHHHHHCS---SCCHHHHH--------------------HHHHSCHHHHHHHHHHH----HHT-----CBCCHH
T ss_pred HHHHHHHHHhhccC---cccHHHHH--------------------HHHhhhccchHHHHHHh----hcc-----CCchHH
Confidence 11111111111100 00000000 00000000000000000 000 023445
Q ss_pred hhccccccccEEEEecCCCCccCCcchHHHH-HhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhhhc
Q 020064 259 DNIDNIRHINATIVQGRYDVCCPMMSAWDLH-KAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNLIKN 329 (331)
Q Consensus 259 ~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~-~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~~ 329 (331)
..+.++ ++|+|+|+|++|.++|++..+.+. +.++++++++++++||+++.++ ++++.+.|.+||++..+
T Consensus 202 ~~~~~i-~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~-p~~~~~~i~~fl~~~~~ 271 (279)
T 4g9e_A 202 DIVAEA-QLPIAVVNGRDEPFVELDFVSKVKFGNLWEGKTHVIDNAGHAPFREA-PAEFDAYLARFIRDCTQ 271 (279)
T ss_dssp HHHHHC-CSCEEEEEETTCSSBCHHHHTTCCCSSBGGGSCEEETTCCSCHHHHS-HHHHHHHHHHHHHHHHS
T ss_pred HHHHhc-CCCEEEEEcCCCcccchHHHHHHhhccCCCCeEEEECCCCcchHHhC-HHHHHHHHHHHHHHhhh
Confidence 667888 599999999999999998888887 6778999999999999999997 99999999999988653
|
| >4dnp_A DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petunia hybrida} PDB: 4dnq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-35 Score=232.77 Aligned_cols=254 Identities=17% Similarity=0.149 Sum_probs=164.2
Q ss_pred eEEEEeCCCCCCCcEEEeccCCCCCC-CCCcccccCCCCcEEEEecCCCCCCCCCCC--CCCccchHHHHHHHHHHHHHh
Q 020064 34 TIYWEQSGNPTGHPVVFLHGGPGGGT-TPSNRRFFDPDFYRIILFDQRGAGKSTPHA--CLDQNTTWDLIDDIEKLRQHL 110 (331)
Q Consensus 34 ~l~~~~~g~~~~~~vl~~HG~~~~~~-~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~--~~~~~~~~~~~~~~~~~~~~~ 110 (331)
+++|...|+ ++|+|||+||++++.. |..++..+.+ ||+|+++|+||||.|.... ....++++++++|+.++++.+
T Consensus 10 ~l~~~~~g~-~~p~vv~~HG~~~~~~~~~~~~~~l~~-g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (269)
T 4dnp_A 10 ALNVRVVGS-GERVLVLAHGFGTDQSAWNRILPFFLR-DYRVVLYDLVCAGSVNPDFFDFRRYTTLDPYVDDLLHILDAL 87 (269)
T ss_dssp HTTCEEECS-CSSEEEEECCTTCCGGGGTTTGGGGTT-TCEEEEECCTTSTTSCGGGCCTTTCSSSHHHHHHHHHHHHHT
T ss_pred HhhhhhcCC-CCCEEEEEeCCCCcHHHHHHHHHHHhC-CcEEEEEcCCCCCCCCCCCCCccccCcHHHHHHHHHHHHHhc
Confidence 567777786 5689999999776654 4455555544 9999999999999997521 113348999999999999999
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhc
Q 020064 111 EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYS 190 (331)
Q Consensus 111 ~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (331)
+.++++++|||+||.+++.+|.++|++|+++|++++.........+. .......+......... ....+...+.
T Consensus 88 ~~~~~~l~GhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 161 (269)
T 4dnp_A 88 GIDCCAYVGHSVSAMIGILASIRRPELFSKLILIGASPRFLNDEDYH-----GGFEQGEIEKVFSAMEA-NYEAWVNGFA 161 (269)
T ss_dssp TCCSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCCBCBTTBC-----CSBCHHHHHHHHHHHHH-CHHHHHHHHH
T ss_pred CCCeEEEEccCHHHHHHHHHHHhCcHhhceeEEeCCCCCCCChHHhc-----cccchHHHHHHHHhccc-cHHHHHHHhh
Confidence 99999999999999999999999999999999999865432111000 00000111111000000 0001111111
Q ss_pred cccC-CCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccE
Q 020064 191 KRLN-SDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINA 269 (331)
Q Consensus 191 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~ 269 (331)
.... .............+. ............... ..+....+.++ ++|+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~------------~~~~~~~~~~i-~~P~ 211 (269)
T 4dnp_A 162 PLAVGADVPAAVREFSRTLF-----------------NMRPDITLFVSRTVF------------NSDMRGVLGLV-KVPC 211 (269)
T ss_dssp HHHHCSSCHHHHHHHHHHHH-----------------HSCHHHHHHHHHHHH------------TCCCGGGGGGC-CSCE
T ss_pred hhhccCCChhHHHHHHHHHH-----------------ccCcchhhhHhhhhc------------chhhHhhhccc-cCCE
Confidence 1000 001100000000000 000000000000000 22345567888 5999
Q ss_pred EEEecCCCCccCCcchHHHHHhCCC-CcEEEecCCCCCCCcCCchhHHHHHHHHHHHh
Q 020064 270 TIVQGRYDVCCPMMSAWDLHKAWPE-ADFKVVADAGHSANEPGIAAELVATNEKLKNL 326 (331)
Q Consensus 270 l~i~G~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 326 (331)
|+++|++|.++|++.++.+.+.+++ +++++++++||+++.++ ++++.+.|.+|+++
T Consensus 212 l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~-p~~~~~~i~~fl~~ 268 (269)
T 4dnp_A 212 HIFQTARDHSVPASVATYLKNHLGGKNTVHWLNIEGHLPHLSA-PTLLAQELRRALSH 268 (269)
T ss_dssp EEEEEESBTTBCHHHHHHHHHHSSSCEEEEEEEEESSCHHHHC-HHHHHHHHHHHHC-
T ss_pred EEEecCCCcccCHHHHHHHHHhCCCCceEEEeCCCCCCccccC-HHHHHHHHHHHHhh
Confidence 9999999999999999999999988 79999999999999987 99999999999964
|
| >3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-34 Score=230.59 Aligned_cols=266 Identities=18% Similarity=0.132 Sum_probs=173.6
Q ss_pred CCccceeEeCCCceEEEEeCCCCCCCcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHH
Q 020064 21 PYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLI 100 (331)
Q Consensus 21 ~~~~~~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~ 100 (331)
+++..+++++++ +++|...|+ +|+||++||++++...+......+.++|+|+++|+||+|.|.... ..+++++++
T Consensus 47 ~~~~~~~~~~~~-~~~~~~~g~--~p~vv~lhG~~~~~~~~~~~~~~L~~~~~v~~~D~~G~G~S~~~~--~~~~~~~~~ 121 (314)
T 3kxp_A 47 HFISRRVDIGRI-TLNVREKGS--GPLMLFFHGITSNSAVFEPLMIRLSDRFTTIAVDQRGHGLSDKPE--TGYEANDYA 121 (314)
T ss_dssp CCEEEEEECSSC-EEEEEEECC--SSEEEEECCTTCCGGGGHHHHHTTTTTSEEEEECCTTSTTSCCCS--SCCSHHHHH
T ss_pred CcceeeEEECCE-EEEEEecCC--CCEEEEECCCCCCHHHHHHHHHHHHcCCeEEEEeCCCcCCCCCCC--CCCCHHHHH
Confidence 445666776555 999999884 889999999776655444333334558999999999999998554 568999999
Q ss_pred HHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCC--
Q 020064 101 DDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIP-- 178 (331)
Q Consensus 101 ~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 178 (331)
+|+.++++.++.++++++|||+||.+++.+|.++|++++++|++++.............. ......
T Consensus 122 ~dl~~~l~~l~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~------------~~~~~~~~ 189 (314)
T 3kxp_A 122 DDIAGLIRTLARGHAILVGHSLGARNSVTAAAKYPDLVRSVVAIDFTPYIETEALDALEA------------RVNAGSQL 189 (314)
T ss_dssp HHHHHHHHHHTSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCTTCCHHHHHHHHH------------HTTTTCSC
T ss_pred HHHHHHHHHhCCCCcEEEEECchHHHHHHHHHhChhheeEEEEeCCCCCCCcchhhHHHH------------Hhhhchhh
Confidence 999999999999999999999999999999999999999999999866433221111000 000000
Q ss_pred cchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhh
Q 020064 179 ENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLL 258 (331)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (331)
..........+.................... . ..................... . ..+..
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~---~~~~~~~~~~~~~~~~~~~~~-------~-----~~~~~ 248 (314)
T 3kxp_A 190 FEDIKAVEAYLAGRYPNIPADAIRIRAESGY------Q---PVDGGLRPLASSAAMAQTARG-------L-----RSDLV 248 (314)
T ss_dssp BSSHHHHHHHHHHHSTTSCHHHHHHHHHHSE------E---EETTEEEESSCHHHHHHHHHH-------T-----TSCCH
T ss_pred hcCHHHHHHHHHhhcccCchHHHHHHhhhhh------c---ccccccccccChhhhhhhccc-------c-----Ccchh
Confidence 0000000011101011111000000000000 0 000000000000000000000 0 11445
Q ss_pred hhccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHh
Q 020064 259 DNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNL 326 (331)
Q Consensus 259 ~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 326 (331)
..+.++ ++|+|+++|++|.++|++.++.+.+.++++++++++++||+++.++ ++++.+.|.+||++
T Consensus 249 ~~~~~i-~~P~Lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~g~gH~~~~e~-~~~~~~~i~~fl~~ 314 (314)
T 3kxp_A 249 PAYRDV-TKPVLIVRGESSKLVSAAALAKTSRLRPDLPVVVVPGADHYVNEVS-PEITLKAITNFIDA 314 (314)
T ss_dssp HHHHHC-CSCEEEEEETTCSSSCHHHHHHHHHHCTTSCEEEETTCCSCHHHHC-HHHHHHHHHHHHHC
T ss_pred hHhhcC-CCCEEEEecCCCccCCHHHHHHHHHhCCCceEEEcCCCCCcchhhC-HHHHHHHHHHHHhC
Confidence 667888 5999999999999999999999999999999999999999999887 99999999999974
|
| >3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-35 Score=246.31 Aligned_cols=269 Identities=19% Similarity=0.194 Sum_probs=174.1
Q ss_pred cceeEeCCCceEEEEeCCCCCCCcEEEeccCCCCCC-CCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHH
Q 020064 24 TGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGT-TPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDD 102 (331)
Q Consensus 24 ~~~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~-~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~ 102 (331)
...+...+|.+++|...| ++|+|||+||++++.. |..++..+.++||+|+++|+||||.|+.+. ..++++++++|
T Consensus 5 ~~~~~~~dG~~l~y~~~G--~gp~VV~lHG~~~~~~~~~~l~~~La~~Gy~Vi~~D~rG~G~S~~~~--~~~s~~~~a~d 80 (456)
T 3vdx_A 5 TVGQENSTSIDLYYEDHG--TGVPVVLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGFGQSSQPT--TGYDYDTFAAD 80 (456)
T ss_dssp EEEEETTEEEEEEEEEES--SSEEEEEECCTTCCGGGGTTHHHHHHHHTEEEEEECCTTSTTSCCCS--SCCSHHHHHHH
T ss_pred eecccccCCeEEEEEEeC--CCCEEEEECCCCCcHHHHHHHHHHHHHCCcEEEEECCCCCCCCCCCC--CCCCHHHHHHH
Confidence 344456688899999998 6899999999776644 455666666789999999999999998765 46899999999
Q ss_pred HHHHHHHhCCCcEEEEEeChhHHHHHHHHHhC-CCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcch
Q 020064 103 IEKLRQHLEIPEWQVFGGSWGSTLALAYSLAH-PDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENE 181 (331)
Q Consensus 103 ~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~-p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (331)
+.++++.++.++++++||||||.+++.+|+.+ |++++++|++++........... .........+..+........
T Consensus 81 l~~~l~~l~~~~v~LvGhS~GG~ia~~~aa~~~p~~v~~lVli~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 157 (456)
T 3vdx_A 81 LNTVLETLDLQDAVLVGFSMGTGEVARYVSSYGTARIAAVAFLASLEPFLLKTDDN---PDGAAPQEFFDGIVAAVKADR 157 (456)
T ss_dssp HHHHHHHHTCCSEEEEEEGGGGHHHHHHHHHHCSSSEEEEEEESCCCSCCBCCSSC---CSCSBCHHHHHHHHHHHHHCH
T ss_pred HHHHHHHhCCCCeEEEEECHHHHHHHHHHHhcchhheeEEEEeCCccccccccccc---ccccchHHHHHHHHHhhhccc
Confidence 99999999999999999999999999998887 89999999999865421110000 000000000000000000000
Q ss_pred hhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhh----hhhhhhccCCCCCcchh
Q 020064 182 RSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARI----ENHYFLNKGFFPSDSFL 257 (331)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 257 (331)
..+...+...+. ...................... ........... ..+.
T Consensus 158 -~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~d~ 210 (456)
T 3vdx_A 158 -YAFYTGFFNDFY------------------------NLDENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTW--YTDF 210 (456)
T ss_dssp -HHHHHHHHHHHT------------------------TTTTSBTTTBCHHHHHHHHHHHHTSCTTHHHHGGGGT--TCCC
T ss_pred -hHHHHHHHHHHh------------------------cccccccccccHHHHHHHhhhccccchhhhhhhhhhh--hhhH
Confidence 000000000000 0000000000000000000000 00000000000 2234
Q ss_pred hhhccccccccEEEEecCCCCccCCc-chHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhhh
Q 020064 258 LDNIDNIRHINATIVQGRYDVCCPMM-SAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNLIK 328 (331)
Q Consensus 258 ~~~l~~i~~~P~l~i~G~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~ 328 (331)
...+.++ ++|+|+|+|++|.++|++ ..+.+.+.++++++++++++||+++.+. ++++.+.|.+|+++..
T Consensus 211 ~~~l~~i-~~PvLiI~G~~D~~vp~~~~~~~l~~~~~~~~~~~i~gagH~~~~e~-p~~v~~~I~~FL~~~l 280 (456)
T 3vdx_A 211 RADIPRI-DVPALILHGTGDRTLPIENTARVFHKALPSAEYVEVEGAPHGLLWTH-AEEVNTALLAFLAKAL 280 (456)
T ss_dssp TTTSTTC-CSCCEEEEETTCSSSCGGGTHHHHHHHCTTSEEEEETTCCSCTTTTT-HHHHHHHHHHHHHHHH
T ss_pred HHHhhhC-CCCEEEEEeCCCCCcCHHHHHHHHHHHCCCceEEEeCCCCCcchhhC-HHHHHHHHHHHHHHhh
Confidence 5577888 599999999999999988 7888888899999999999999999886 9999999999998753
|
| >3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-35 Score=237.41 Aligned_cols=264 Identities=16% Similarity=0.085 Sum_probs=168.6
Q ss_pred eeEeCCCceEEEEeCCCCCCCcEEEeccCCCCCCCCC-cccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHH
Q 020064 26 ILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPS-NRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIE 104 (331)
Q Consensus 26 ~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~~~~-~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~ 104 (331)
...++++ +++|...|+ ++|+|||+||++++...|. .+..+ ||+|+++|+||+|.|..... ..++.+++++|+.
T Consensus 64 ~~~~~~~-~~~~~~~g~-~~~~vv~~hG~~~~~~~~~~~~~~l---g~~Vi~~D~~G~G~S~~~~~-~~~~~~~~a~dl~ 137 (330)
T 3p2m_A 64 VERVQAG-AISALRWGG-SAPRVIFLHGGGQNAHTWDTVIVGL---GEPALAVDLPGHGHSAWRED-GNYSPQLNSETLA 137 (330)
T ss_dssp EEEEEET-TEEEEEESS-SCCSEEEECCTTCCGGGGHHHHHHS---CCCEEEECCTTSTTSCCCSS-CBCCHHHHHHHHH
T ss_pred ceeecCc-eEEEEEeCC-CCCeEEEECCCCCccchHHHHHHHc---CCeEEEEcCCCCCCCCCCCC-CCCCHHHHHHHHH
Confidence 4445455 899999986 5789999999877655443 34333 89999999999999985543 4688999999999
Q ss_pred HHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhh
Q 020064 105 KLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSC 184 (331)
Q Consensus 105 ~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (331)
++++.++.++++|+||||||.+++.+|.++|++|+++|++++................ .................
T Consensus 138 ~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 212 (330)
T 3p2m_A 138 PVLRELAPGAEFVVGMSLGGLTAIRLAAMAPDLVGELVLVDVTPSALQRHAELTAEQR-----GTVALMHGEREFPSFQA 212 (330)
T ss_dssp HHHHHSSTTCCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCHHHHHHHHHHTCC----------------CCBSCHHH
T ss_pred HHHHHhCCCCcEEEEECHhHHHHHHHHHhChhhcceEEEEcCCCccchhhhhhhhhhh-----hhhhhhcCCccccCHHH
Confidence 9999999999999999999999999999999999999999986543322111111000 00000000000000001
Q ss_pred hHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhcccc
Q 020064 185 FVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNI 264 (331)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 264 (331)
................... .+. ........... ...+..........+..+.+.++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~---~~~-----~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~l~~i 268 (330)
T 3p2m_A 213 MLDLTIAAAPHRDVKSLRR---GVF-----HNSRRLDNGNW----------------VWRYDAIRTFGDFAGLWDDVDAL 268 (330)
T ss_dssp HHHHHHHHCTTSCHHHHHH---HHH-----TTEEECSSSCE----------------EESSCCCSBCCCHHHHHHHHHHC
T ss_pred HHHHHHhcCCCCCHHHHHH---HHH-----hcccccCCCce----------------EEeechhhCccccHHHHHHHhhC
Confidence 1111100000000000000 000 00000000000 00000000011122334578889
Q ss_pred ccccEEEEecCCCCccCCcchHHHHHhCCCCc-EEEecCCCCCCCcCCchhHHHHHHHHHHHh
Q 020064 265 RHINATIVQGRYDVCCPMMSAWDLHKAWPEAD-FKVVADAGHSANEPGIAAELVATNEKLKNL 326 (331)
Q Consensus 265 ~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~-~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 326 (331)
++|+|+|+|++|.++|++.++.+.+.+|+++ +++++++||+++.++ ++++.+.|.+||++
T Consensus 269 -~~PvLii~G~~D~~v~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~-p~~~~~~i~~fl~~ 329 (330)
T 3p2m_A 269 -SAPITLVRGGSSGFVTDQDTAELHRRATHFRGVHIVEKSGHSVQSDQ-PRALIEIVRGVLDT 329 (330)
T ss_dssp -CSCEEEEEETTCCSSCHHHHHHHHHHCSSEEEEEEETTCCSCHHHHC-HHHHHHHHHHHTTC
T ss_pred -CCCEEEEEeCCCCCCCHHHHHHHHHhCCCCeeEEEeCCCCCCcchhC-HHHHHHHHHHHHhc
Confidence 5999999999999999999999999999999 999999999999997 99999999999864
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-34 Score=250.82 Aligned_cols=293 Identities=14% Similarity=0.105 Sum_probs=183.7
Q ss_pred CCCccceeEeCCCceEEEEeCCCCCCCcEEEeccCCCCCC-CCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHH
Q 020064 20 EPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGT-TPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWD 98 (331)
Q Consensus 20 ~~~~~~~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~-~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~ 98 (331)
...+..++++.+|.+++|...| ++|+||++||++++.. |...+..+.++||+|+++|+||||.|..+.....++.++
T Consensus 235 ~~~~~~~~~~~dg~~l~~~~~g--~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~D~~G~G~S~~~~~~~~~~~~~ 312 (555)
T 3i28_A 235 SDMSHGYVTVKPRVRLHFVELG--SGPAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESSAPPEIEEYCMEV 312 (555)
T ss_dssp GGSEEEEEEEETTEEEEEEEEC--SSSEEEEECCTTCCGGGGTTHHHHHHHTTCEEEEECCTTSTTSCCCSCGGGGSHHH
T ss_pred cccceeEEEeCCCcEEEEEEcC--CCCEEEEEeCCCCchhHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCcccccHHH
Confidence 3566789999999999999998 6899999999776644 455666676789999999999999999776545788999
Q ss_pred HHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCC
Q 020064 99 LIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIP 178 (331)
Q Consensus 99 ~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (331)
+++|+.++++.++.++++++||||||.+++.+|.++|++++++|+++++............... ..+..........+
T Consensus 313 ~~~d~~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 390 (555)
T 3i28_A 313 LCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLESIK--ANPVFDYQLYFQEP 390 (555)
T ss_dssp HHHHHHHHHHHHTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCTTSCHHHHHH--TCGGGHHHHHHHST
T ss_pred HHHHHHHHHHHcCCCcEEEEEecHHHHHHHHHHHhChHheeEEEEEccCCCCCCcccchHHHHh--cCCccchhHHhhCC
Confidence 9999999999999999999999999999999999999999999999986543211100000000 00000000000000
Q ss_pred c---chhh----hhHHhhccccCCCc-hHHHHHHHHHhhhHHHhhhcCCCChh--hhhcCCcc----HHHHHHhhhhhhh
Q 020064 179 E---NERS----CFVDAYSKRLNSDD-KETQYAAARAWTKWEMMTAHLLPNEE--NIKRGEDD----IFSLAFARIENHY 244 (331)
Q Consensus 179 ~---~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~----~~~~~~~~~~~~~ 244 (331)
. .... .....+........ ..... ..........+. ........ .+...+.....
T Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 459 (555)
T 3i28_A 391 GVAEAELEQNLSRTFKSLFRASDESVLSMHKV---------CEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKSGF-- 459 (555)
T ss_dssp THHHHHHHHCHHHHHHHHSCCTTSCCCCCSSH---------HHHTSSSTTSCSSCCCCTTCCHHHHHHHHHHHTTTTT--
T ss_pred CchHHHHhhhHHHHHHHHhccccccccccccc---------cccccccccCccccccccccCHHHHHHHHHHHhcccc--
Confidence 0 0000 00000000000000 00000 000000000000 00000000 00111110000
Q ss_pred hhccCCCCC-----cchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHH
Q 020064 245 FLNKGFFPS-----DSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVAT 319 (331)
Q Consensus 245 ~~~~~~~~~-----~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~ 319 (331)
.....+... ..+....+.++ ++|+|+|+|++|.++|++.++.+.+.+|++++++++++||+++.++ ++++.+.
T Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~i-~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~-p~~~~~~ 537 (555)
T 3i28_A 460 RGPLNWYRNMERNWKWACKSLGRKI-LIPALMVTAEKDFVLVPQMSQHMEDWIPHLKRGHIEDCGHWTQMDK-PTEVNQI 537 (555)
T ss_dssp HHHHHTTSCHHHHHHHHHTTTTCCC-CSCEEEEEETTCSSSCGGGGTTGGGTCTTCEEEEETTCCSCHHHHS-HHHHHHH
T ss_pred hhHHHHHHhccccchhhcccccccc-ccCEEEEEeCCCCCcCHHHHHHHHhhCCCceEEEeCCCCCCcchhC-HHHHHHH
Confidence 000000000 11334466788 5999999999999999999999999999999999999999999997 9999999
Q ss_pred HHHHHHhhhc
Q 020064 320 NEKLKNLIKN 329 (331)
Q Consensus 320 i~~fl~~~~~ 329 (331)
|.+|+++...
T Consensus 538 i~~fl~~~~~ 547 (555)
T 3i28_A 538 LIKWLDSDAR 547 (555)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHhccC
Confidence 9999988653
|
| >3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-35 Score=232.04 Aligned_cols=278 Identities=17% Similarity=0.140 Sum_probs=174.8
Q ss_pred CCccceeEeCCCceEEEEeCCCCCCCcEEEeccCCCCCC-CCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHH
Q 020064 21 PYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGT-TPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDL 99 (331)
Q Consensus 21 ~~~~~~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~-~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~ 99 (331)
++++.+++.++ .+++|...|++++|+||++||++++.. |..++..+.+.||+|+++|+||+|.|........++.+++
T Consensus 3 ~~~~~~~~~~g-~~l~~~~~g~~~~~~vv~~hG~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~ 81 (286)
T 3qit_A 3 AMEEKFLEFGG-NQICLCSWGSPEHPVVLCIHGILEQGLAWQEVALPLAAQGYRVVAPDLFGHGRSSHLEMVTSYSSLTF 81 (286)
T ss_dssp CCEEEEEEETT-EEEEEEEESCTTSCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSGGGCSHHHH
T ss_pred hhhhheeecCC-ceEEEeecCCCCCCEEEEECCCCcccchHHHHHHHhhhcCeEEEEECCCCCCCCCCCCCCCCcCHHHH
Confidence 35566777654 599999999888899999999776644 4556666777899999999999999987764457889999
Q ss_pred HHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhh-hHhhcccccCChhhHHhhhccCC
Q 020064 100 IDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEID-WFYEGGAAAIYPDAWESFRDLIP 178 (331)
Q Consensus 100 ~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 178 (331)
++|+..+++.++.++++++|||+||.+++.+|.++|++++++|++++......... .... .+...+........
T Consensus 82 ~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 156 (286)
T 3qit_A 82 LAQIDRVIQELPDQPLLLVGHSMGAMLATAIASVRPKKIKELILVELPLPAEESKKESAVN-----QLTTCLDYLSSTPQ 156 (286)
T ss_dssp HHHHHHHHHHSCSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCC---CCHHH-----HHHHHHHHHTCCCC
T ss_pred HHHHHHHHHhcCCCCEEEEEeCHHHHHHHHHHHhChhhccEEEEecCCCCCccccchhhhH-----HHHHHHHHHhcccc
Confidence 99999999999999999999999999999999999999999999998765432110 0000 00000000000000
Q ss_pred ---cchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcc
Q 020064 179 ---ENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDS 255 (331)
Q Consensus 179 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (331)
................................ . .................. ...........
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~--~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~ 221 (286)
T 3qit_A 157 HPIFPDVATAASRLRQAIPSLSEEFSYILAQRITQ------P--NQGGVRWSWDAIIRTRSI-------LGLNNLPGGRS 221 (286)
T ss_dssp CCCBSSHHHHHHHHHHHSTTSCHHHHHHHHHHTEE------E--ETTEEEECSCGGGGGHHH-------HTTTSCTTHHH
T ss_pred ccccccHHHHHHHhhcCCcccCHHHHHHHhhcccc------c--cccceeeeechhhhcccc-------ccccccccchh
Confidence 00000000000000000000000000000000 0 000000000000000000 00000000133
Q ss_pred hhhhhccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHH
Q 020064 256 FLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEK 322 (331)
Q Consensus 256 ~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~ 322 (331)
+....+.++ ++|+|+|+|++|.++|++..+.+.+.+++++++++++ ||+++.++ |+++.+.|.+
T Consensus 222 ~~~~~~~~i-~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~e~-p~~~~~~i~~ 285 (286)
T 3qit_A 222 QYLEMLKSI-QVPTTLVYGDSSKLNRPEDLQQQKMTMTQAKRVFLSG-GHNLHIDA-AAALASLILT 285 (286)
T ss_dssp HHHHHHHHC-CSCEEEEEETTCCSSCHHHHHHHHHHSTTSEEEEESS-SSCHHHHT-HHHHHHHHHC
T ss_pred HHHHHHhcc-CCCeEEEEeCCCcccCHHHHHHHHHHCCCCeEEEeeC-CchHhhhC-hHHHHHHhhc
Confidence 455677888 5999999999999999999999999999999999999 99999997 9999988764
|
| >2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-34 Score=226.44 Aligned_cols=232 Identities=13% Similarity=0.112 Sum_probs=161.5
Q ss_pred CCCceEEEEeCCCC----CCCcEEEeccCCCC--CC-CCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHH
Q 020064 30 SDIHTIYWEQSGNP----TGHPVVFLHGGPGG--GT-TPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDD 102 (331)
Q Consensus 30 ~~g~~l~~~~~g~~----~~~~vl~~HG~~~~--~~-~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~ 102 (331)
.+|.++++..+.+. ++|+||++||++++ .. |..++..+.+.||+|+++|+||||.|+... ..++++++++|
T Consensus 8 ~~g~~l~~~~~~p~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~--~~~~~~~~~~d 85 (251)
T 2wtm_A 8 CDGIKLNAYLDMPKNNPEKCPLCIIIHGFTGHSEERHIVAVQETLNEIGVATLRADMYGHGKSDGKF--EDHTLFKWLTN 85 (251)
T ss_dssp ETTEEEEEEEECCTTCCSSEEEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTSSSCG--GGCCHHHHHHH
T ss_pred cCCcEEEEEEEccCCCCCCCCEEEEEcCCCcccccccHHHHHHHHHHCCCEEEEecCCCCCCCCCcc--ccCCHHHHHHH
Confidence 36668888766543 34689999998776 33 334556666789999999999999998643 35788899999
Q ss_pred HHHHHHHhC----CCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCC
Q 020064 103 IEKLRQHLE----IPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIP 178 (331)
Q Consensus 103 ~~~~~~~~~----~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (331)
+.++++.+. .++++++||||||.+++.+|.++|++++++|+++|......... . .. ... ....
T Consensus 86 ~~~~~~~l~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~---~-~~--~~~-------~~~~ 152 (251)
T 2wtm_A 86 ILAVVDYAKKLDFVTDIYMAGHSQGGLSVMLAAAMERDIIKALIPLSPAAMIPEIAR---T-GE--LLG-------LKFD 152 (251)
T ss_dssp HHHHHHHHTTCTTEEEEEEEEETHHHHHHHHHHHHTTTTEEEEEEESCCTTHHHHHH---H-TE--ETT-------EECB
T ss_pred HHHHHHHHHcCcccceEEEEEECcchHHHHHHHHhCcccceEEEEECcHHHhHHHHh---h-hh--hcc-------ccCC
Confidence 999999884 46899999999999999999999999999999998643211100 0 00 000 0000
Q ss_pred cchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhh
Q 020064 179 ENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLL 258 (331)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (331)
... ....+. .+ .. ......+..... ..+..
T Consensus 153 ~~~-------~~~~~~------------~~-----------~~-----~~~~~~~~~~~~---------------~~~~~ 182 (251)
T 2wtm_A 153 PEN-------IPDELD------------AW-----------DG-----RKLKGNYVRVAQ---------------TIRVE 182 (251)
T ss_dssp TTB-------CCSEEE------------ET-----------TT-----EEEETHHHHHHT---------------TCCHH
T ss_pred chh-------cchHHh------------hh-----------hc-----cccchHHHHHHH---------------ccCHH
Confidence 000 000000 00 00 000000000000 12344
Q ss_pred hhccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhhhc
Q 020064 259 DNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNLIKN 329 (331)
Q Consensus 259 ~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~~ 329 (331)
+.+.++ ++|+|+|+|++|.++|++.++.+.+.++++++++++++||++ .+. ++++.+.|.+|+++..+
T Consensus 183 ~~~~~i-~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~-~~~-~~~~~~~i~~fl~~~~~ 250 (251)
T 2wtm_A 183 DFVDKY-TKPVLIVHGDQDEAVPYEASVAFSKQYKNCKLVTIPGDTHCY-DHH-LELVTEAVKEFMLEQIA 250 (251)
T ss_dssp HHHHHC-CSCEEEEEETTCSSSCHHHHHHHHHHSSSEEEEEETTCCTTC-TTT-HHHHHHHHHHHHHHHHC
T ss_pred HHHHhc-CCCEEEEEeCCCCCcChHHHHHHHHhCCCcEEEEECCCCccc-chh-HHHHHHHHHHHHHHhcc
Confidence 567788 599999999999999999999999999999999999999999 775 99999999999987653
|
| >3i1i_A Homoserine O-acetyltransferase; structural genomics, IDP01610, O-acetyltransfera bacillus anthracis; HET: MSE; 2.44A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-34 Score=234.29 Aligned_cols=291 Identities=11% Similarity=0.019 Sum_probs=171.7
Q ss_pred ccceeEeCCCc----eEEEEeCCCCC---CCcEEEeccCCCCCCC-------------C-Ccc---cccCCCCcEEEEec
Q 020064 23 STGILKVSDIH----TIYWEQSGNPT---GHPVVFLHGGPGGGTT-------------P-SNR---RFFDPDFYRIILFD 78 (331)
Q Consensus 23 ~~~~~~~~~g~----~l~~~~~g~~~---~~~vl~~HG~~~~~~~-------------~-~~~---~~~~~~g~~vi~~D 78 (331)
+...+.+.+|. +|+|..+|+++ +|+|||+||++++... | .++ ..+.++||+||++|
T Consensus 13 ~~~~~~~~~g~~l~~~i~y~~~g~~~~~~~p~vll~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D 92 (377)
T 3i1i_A 13 ILKEYTFENGRTIPVQMGYETYGTLNRERSNVILICHYFSATSHAAGKYTAHDEESGWWDGLIGPGKAIDTNQYFVICTD 92 (377)
T ss_dssp EEEEEECTTSCEEEEEEEEEEESCCCTTCCCEEEEECCTTCCSCCSSCSSTTCSSCCTTTTTEETTSSEETTTCEEEEEC
T ss_pred eecceeecCCCEeeeeEEEEeecccCCCCCCEEEEeccccCcchhccccccccccccchhhhcCCCCccccccEEEEEec
Confidence 34456666654 56899888533 4789999998776332 3 344 46767999999999
Q ss_pred CCCCCCCCC-------CCC------------CCccchHHHHHHHHHHHHHhCCCcEE-EEEeChhHHHHHHHHHhCCCce
Q 020064 79 QRGAGKSTP-------HAC------------LDQNTTWDLIDDIEKLRQHLEIPEWQ-VFGGSWGSTLALAYSLAHPDKV 138 (331)
Q Consensus 79 ~~G~G~s~~-------~~~------------~~~~~~~~~~~~~~~~~~~~~~~~v~-lvG~S~Gg~~a~~~a~~~p~~v 138 (331)
+||||.|.. +.. ...++++++++|+.++++.++.++++ |+||||||.+++.+|.++|++|
T Consensus 93 ~~G~G~S~G~~~g~~g~~~~~p~~~~~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~ilvGhS~Gg~ia~~~a~~~p~~v 172 (377)
T 3i1i_A 93 NLCNVQVKNPHVITTGPKSINPKTGDEYAMDFPVFTFLDVARMQCELIKDMGIARLHAVMGPSAGGMIAQQWAVHYPHMV 172 (377)
T ss_dssp CTTCSCTTSTTCCCCSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHTTCCCBSEEEEETHHHHHHHHHHHHCTTTB
T ss_pred ccccccccCCCcccCCCCCCCCCCCCcccCCCCCCCHHHHHHHHHHHHHHcCCCcEeeEEeeCHhHHHHHHHHHHChHHH
Confidence 999987441 110 11568999999999999999999986 9999999999999999999999
Q ss_pred eeEEE-eccccchhhhhhhHhh-------ccccc---C----Chhh-HH--hhhccCCcchhhhhHHhhccccCCCchHH
Q 020064 139 TGLVL-RGIFLLRKKEIDWFYE-------GGAAA---I----YPDA-WE--SFRDLIPENERSCFVDAYSKRLNSDDKET 200 (331)
Q Consensus 139 ~~li~-~~~~~~~~~~~~~~~~-------~~~~~---~----~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (331)
+++|+ ++++............ ..... . .+.. .. .............+...+...........
T Consensus 173 ~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (377)
T 3i1i_A 173 ERMIGVITNPQNPIITSVNVAQNAIEAIRLDPSWKGGKYGEEQPMKGLQLANRMMFMNAFDEHFYETTYPRNSIEVEPYE 252 (377)
T ss_dssp SEEEEESCCSBCCHHHHHHTTHHHHHHHHHSGGGGGGCCTTSCCHHHHHHHHHHHHTTSSCHHHHHHHSCCCSSCCGGGT
T ss_pred HHhcccCcCCCcCCchhhHHHHHHHHHHhcCCCccCCccccCCccchHHHHHHHHhhhcCCHHHHHHHhhhhhccccccc
Confidence 99999 7766542211100000 00000 0 0000 00 00000000000011111111110000000
Q ss_pred --H-HHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCC
Q 020064 201 --Q-YAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYD 277 (331)
Q Consensus 201 --~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D 277 (331)
. ......+......... .......+......+. .........+..+.+.++ ++|+|+|+|++|
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~i-~~Pvlii~G~~D 318 (377)
T 3i1i_A 253 KVSSLTSFEKEINKLTYRSI--------ELVDANSWMYTAKAVL-----LHDIAHGFSSLEEALSNV-EANVLMIPCKQD 318 (377)
T ss_dssp CTTCCCHHHHHHHHHHHHTT--------TTCCHHHHHHHHHHHH-----HCBTTTTSSCHHHHHHTC-CSEEEEECBTTC
T ss_pred cccchhHHHHHHHHHHhhhh--------cccCHHHHHHHHHHHh-----hcccccccCCHHHHHhhC-CCCEEEEecCCc
Confidence 0 0000000000000000 0001111111111110 000000123456678899 599999999999
Q ss_pred CccCCcchHHHHHhC----CCCcEEEecC-CCCCCCcCCchhHHHHHHHHHHHhhh
Q 020064 278 VCCPMMSAWDLHKAW----PEADFKVVAD-AGHSANEPGIAAELVATNEKLKNLIK 328 (331)
Q Consensus 278 ~~~~~~~~~~~~~~~----~~~~~~~~~~-~gH~~~~~~~~~~~~~~i~~fl~~~~ 328 (331)
.++|++.++.+.+.+ |+++++++++ +||+++.++ |+++.+.|.+||++..
T Consensus 319 ~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~gH~~~~e~-p~~~~~~i~~fl~~~~ 373 (377)
T 3i1i_A 319 LLQPSRYNYKMVDLLQKQGKYAEVYEIESINGHMAGVFD-IHLFEKKVYEFLNRKV 373 (377)
T ss_dssp SSSCTHHHHHHHHHHHHTTCCEEECCBCCTTGGGHHHHC-GGGTHHHHHHHHHSCC
T ss_pred cccCHHHHHHHHHHHHhcCCCceEEEcCCCCCCcchhcC-HHHHHHHHHHHHHhhh
Confidence 999999999999999 9999999998 999999997 9999999999998754
|
| >2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-34 Score=227.17 Aligned_cols=243 Identities=12% Similarity=0.089 Sum_probs=150.2
Q ss_pred CCCcEEEeccCCCCCC-CCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhC-CCcEEEEEeC
Q 020064 44 TGHPVVFLHGGPGGGT-TPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLE-IPEWQVFGGS 121 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~-~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~lvG~S 121 (331)
++++|||+||++++.. |...+..+.++||+||++|+||||.|+.... ..++++++++|+.++++.++ .++++|+|||
T Consensus 9 ~g~~vvllHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~-~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhS 87 (264)
T 2wfl_A 9 QQKHFVLVHGGCLGAWIWYKLKPLLESAGHKVTAVDLSAAGINPRRLD-EIHTFRDYSEPLMEVMASIPPDEKVVLLGHS 87 (264)
T ss_dssp CCCEEEEECCTTCCGGGGTTHHHHHHHTTCEEEEECCTTSTTCSCCGG-GCCSHHHHHHHHHHHHHHSCTTCCEEEEEET
T ss_pred CCCeEEEECCCccccchHHHHHHHHHhCCCEEEEeecCCCCCCCCCcc-cccCHHHHHHHHHHHHHHhCCCCCeEEEEeC
Confidence 6889999999876654 4445556656799999999999999976432 34789999999999999997 5899999999
Q ss_pred hhHHHHHHHHHhCCCceeeEEEeccccchhhh-hhhHhhcccccCChhhHHh-hhccC-----Cc---chhhhhHHhhcc
Q 020064 122 WGSTLALAYSLAHPDKVTGLVLRGIFLLRKKE-IDWFYEGGAAAIYPDAWES-FRDLI-----PE---NERSCFVDAYSK 191 (331)
Q Consensus 122 ~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~-----~~---~~~~~~~~~~~~ 191 (331)
|||.+++.+|.++|++|+++|++++....... ................+.. ..... .. ..........
T Consensus 88 mGG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 165 (264)
T 2wfl_A 88 FGGMSLGLAMETYPEKISVAVFMSAMMPDPNHSLTYPFEKYNEKCPADMMLDSQFSTYGNPENPGMSMILGPQFMALK-- 165 (264)
T ss_dssp THHHHHHHHHHHCGGGEEEEEEESSCCCCTTSCTTHHHHHHHHHSCTTTTTTCEEEEESCTTSCEEEEECCHHHHHHH--
T ss_pred hHHHHHHHHHHhChhhhceeEEEeeccCCCCcchhhHHHHhhhcCcchhhhhhhhhhccCCCCCcchhhhhHHHHHHH--
Confidence 99999999999999999999999975321110 0000000000000000000 00000 00 0000000000
Q ss_pred ccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEE
Q 020064 192 RLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATI 271 (331)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~ 271 (331)
+.............. . ... .......+. . ..... ..... ++|+|+
T Consensus 166 -~~~~~~~~~~~~~~~------~---~~~---------~~~~~~~~~--------~------~~~~~-~~~~~-~~P~l~ 210 (264)
T 2wfl_A 166 -MFQNCSVEDLELAKM------L---TRP---------GSLFFQDLA--------K------AKKFS-TERYG-SVKRAY 210 (264)
T ss_dssp -TSTTSCHHHHHHHHH------H---CCC---------EECCHHHHT--------T------SCCCC-TTTGG-GSCEEE
T ss_pred -HhcCCCHHHHHHHHh------c---cCC---------Ccccccccc--------c------ccccC-hHHhC-CCCeEE
Confidence 000000000000000 0 000 000000000 0 00000 00113 599999
Q ss_pred EecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHH
Q 020064 272 VQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKN 325 (331)
Q Consensus 272 i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~ 325 (331)
|+|++|.++|++.++.+.+.+|++++++++++||+++.|+ |+++++.|.+|++
T Consensus 211 i~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e~-P~~~~~~l~~f~~ 263 (264)
T 2wfl_A 211 IFCNEDKSFPVEFQKWFVESVGADKVKEIKEADHMGMLSQ-PREVCKCLLDISD 263 (264)
T ss_dssp EEETTCSSSCHHHHHHHHHHHCCSEEEEETTCCSCHHHHS-HHHHHHHHHHHHC
T ss_pred EEeCCcCCCCHHHHHHHHHhCCCceEEEeCCCCCchhhcC-HHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999997 9999999999985
|
| >3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-34 Score=226.56 Aligned_cols=242 Identities=12% Similarity=0.004 Sum_probs=150.7
Q ss_pred CCcEEEeccCCCCCC-CCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhC-CCcEEEEEeCh
Q 020064 45 GHPVVFLHGGPGGGT-TPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLE-IPEWQVFGGSW 122 (331)
Q Consensus 45 ~~~vl~~HG~~~~~~-~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~lvG~S~ 122 (331)
+++|||+||++.+.. |..++..+.+.||+|+++|+||||.|+.... ..++++++++|+.++++.++ .++++|+||||
T Consensus 3 ~~~vvllHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~-~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhSm 81 (257)
T 3c6x_A 3 FAHFVLIHTICHGAWIWHKLKPLLEALGHKVTALDLAASGVDPRQIE-EIGSFDEYSEPLLTFLEALPPGEKVILVGESC 81 (257)
T ss_dssp CCEEEEECCTTCCGGGGTTHHHHHHHTTCEEEEECCTTSTTCSCCGG-GCCSHHHHTHHHHHHHHTSCTTCCEEEEEEET
T ss_pred CCcEEEEcCCccCcCCHHHHHHHHHhCCCEEEEeCCCCCCCCCCCcc-cccCHHHHHHHHHHHHHhccccCCeEEEEECc
Confidence 678999999776654 4555566656799999999999999976432 34799999999999999996 58999999999
Q ss_pred hHHHHHHHHHhCCCceeeEEEeccccchhh-hhh----hHhhcccccCChhhHHhhhcc--CC---cchhhhhHHhhccc
Q 020064 123 GSTLALAYSLAHPDKVTGLVLRGIFLLRKK-EID----WFYEGGAAAIYPDAWESFRDL--IP---ENERSCFVDAYSKR 192 (331)
Q Consensus 123 Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~~~~~~~~ 192 (331)
||.+++.+|.++|++|+++|++++...... ... ..... ..... ..+...... .. ...........
T Consensus 82 GG~va~~~a~~~p~~v~~lVl~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 156 (257)
T 3c6x_A 82 GGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLMEV-FPDWK-DTTYFTYTKDGKEITGLKLGFTLLREN--- 156 (257)
T ss_dssp HHHHHHHHHHHHGGGEEEEEEEEECCCCSSSCTTHHHHHHHHH-SCCCT-TCEEEEEEETTEEEEEEECCHHHHHHH---
T ss_pred chHHHHHHHHhCchhhheEEEEecccCCCCCcchhHHHHHhhc-Ccchh-hhhhhhccCCCCccccccccHHHHHHH---
Confidence 999999999999999999999997532111 000 00000 00000 000000000 00 00000000000
Q ss_pred cCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEE
Q 020064 193 LNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIV 272 (331)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i 272 (331)
+............ ... ... ... ....+. .. ... ...... ++|+|+|
T Consensus 157 ~~~~~~~~~~~~~------~~~---~~~-------~~~--~~~~~~--------~~------~~~-~~~~~~-~~P~l~i 202 (257)
T 3c6x_A 157 LYTLCGPEEYELA------KML---TRK-------GSL--FQNILA--------KR------PFF-TKEGYG-SIKKIYV 202 (257)
T ss_dssp TSTTSCHHHHHHH------HHH---CCC-------BCC--CHHHHH--------HS------CCC-CTTTGG-GSCEEEE
T ss_pred HhcCCCHHHHHHH------HHh---cCC-------Ccc--chhhhc--------cc------ccc-ChhhcC-cccEEEE
Confidence 0000000000000 000 000 000 000000 00 000 000112 5899999
Q ss_pred ecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhh
Q 020064 273 QGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNLI 327 (331)
Q Consensus 273 ~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 327 (331)
+|++|.++|++.++.+.+.+|++++++++++||+++.|+ |+++++.|.+|++..
T Consensus 203 ~G~~D~~~p~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~-P~~~~~~l~~f~~~~ 256 (257)
T 3c6x_A 203 WTDQDEIFLPEFQLWQIENYKPDKVYKVEGGDHKLQLTK-TKEIAEILQEVADTY 256 (257)
T ss_dssp ECTTCSSSCHHHHHHHHHHSCCSEEEECCSCCSCHHHHS-HHHHHHHHHHHHHHC
T ss_pred EeCCCcccCHHHHHHHHHHCCCCeEEEeCCCCCCcccCC-HHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999997 999999999999864
|
| >1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-34 Score=226.38 Aligned_cols=246 Identities=14% Similarity=0.066 Sum_probs=152.3
Q ss_pred CCCcEEEeccCCCCCC-CCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhC-CCcEEEEEeC
Q 020064 44 TGHPVVFLHGGPGGGT-TPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLE-IPEWQVFGGS 121 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~-~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~lvG~S 121 (331)
++++|||+||++++.. |...+..+.+.||+||++|+||||.|+.... ..++++++++|+.++++.++ .++++|+|||
T Consensus 3 ~~~~vvllHG~~~~~~~w~~~~~~L~~~g~rVia~Dl~G~G~S~~~~~-~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhS 81 (273)
T 1xkl_A 3 EGKHFVLVHGACHGGWSWYKLKPLLEAAGHKVTALDLAASGTDLRKIE-ELRTLYDYTLPLMELMESLSADEKVILVGHS 81 (273)
T ss_dssp CCCEEEEECCTTCCGGGGTTHHHHHHHTTCEEEECCCTTSTTCCCCGG-GCCSHHHHHHHHHHHHHTSCSSSCEEEEEET
T ss_pred CCCeEEEECCCCCCcchHHHHHHHHHhCCCEEEEecCCCCCCCccCcc-cccCHHHHHHHHHHHHHHhccCCCEEEEecC
Confidence 4688999999877654 4455555656799999999999999976432 34789999999999999997 5899999999
Q ss_pred hhHHHHHHHHHhCCCceeeEEEeccccchhhh-hhhHhhcccccCChhhHHh-hhccCC-----c---chhhhhHHhhcc
Q 020064 122 WGSTLALAYSLAHPDKVTGLVLRGIFLLRKKE-IDWFYEGGAAAIYPDAWES-FRDLIP-----E---NERSCFVDAYSK 191 (331)
Q Consensus 122 ~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~-----~---~~~~~~~~~~~~ 191 (331)
|||.+++.+|.++|++|+++|++++....... ................+.. ...... . ..........
T Consensus 82 mGG~va~~~a~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 159 (273)
T 1xkl_A 82 LGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLEQYNERTPAENWLDTQFLPYGSPEEPLTSMFFGPKFLAHK-- 159 (273)
T ss_dssp THHHHHHHHHHHCGGGEEEEEEESCCCCCSSSCTTHHHHHHHHTSCTTTTTTCEEEECSCTTSCCEEEECCHHHHHHH--
T ss_pred HHHHHHHHHHHhChHhheEEEEEeccCCCCCCcHHHHHHHhhccCChhhHHHHHHhhccCCCCCccccccCHHHHHHH--
Confidence 99999999999999999999999975321110 0000000000000000000 000000 0 0000000000
Q ss_pred ccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEE
Q 020064 192 RLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATI 271 (331)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~ 271 (331)
+............. ... .. ... ....+. .. .... ..... ++|+|+
T Consensus 160 -~~~~~~~~~~~~~~------~~~---~~--------~~~-~~~~~~--------~~------~~~~-~~~~~-~~P~l~ 204 (273)
T 1xkl_A 160 -LYQLCSPEDLALAS------SLV---RP--------SSL-FMEDLS--------KA------KYFT-DERFG-SVKRVY 204 (273)
T ss_dssp -TSTTSCHHHHHHHH------HHC---CC--------BCC-CHHHHH--------HC------CCCC-TTTGG-GSCEEE
T ss_pred -hhccCCHHHHHHHH------Hhc---CC--------Cch-hhhhhh--------cc------cccc-hhhhC-CCCeEE
Confidence 00000000000000 000 00 000 000000 00 0000 00113 599999
Q ss_pred EecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhhh
Q 020064 272 VQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNLIK 328 (331)
Q Consensus 272 i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~ 328 (331)
|+|++|.++|++.++.+.+.+|++++++++++||+++.|+ |+++++.|.+|+++..
T Consensus 205 i~G~~D~~~p~~~~~~~~~~~p~~~~~~i~~aGH~~~~e~-P~~~~~~i~~fl~~~~ 260 (273)
T 1xkl_A 205 IVCTEDKGIPEEFQRWQIDNIGVTEAIEIKGADHMAMLCE-PQKLCASLLEIAHKYN 260 (273)
T ss_dssp EEETTCTTTTHHHHHHHHHHHCCSEEEEETTCCSCHHHHS-HHHHHHHHHHHHHHCC
T ss_pred EEeCCccCCCHHHHHHHHHhCCCCeEEEeCCCCCCchhcC-HHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999997 9999999999998764
|
| >4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-34 Score=230.68 Aligned_cols=271 Identities=16% Similarity=0.136 Sum_probs=169.7
Q ss_pred cceeEeCC-CceEEEEeCCC--CCCCcEEEeccCCCCCC-CCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHH
Q 020064 24 TGILKVSD-IHTIYWEQSGN--PTGHPVVFLHGGPGGGT-TPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDL 99 (331)
Q Consensus 24 ~~~~~~~~-g~~l~~~~~g~--~~~~~vl~~HG~~~~~~-~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~ 99 (331)
...+...+ +.+++|...++ +++|+|||+||++++.. |..++..+.++||+|+++|+||||.|..... ..++.+++
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-~~~~~~~~ 100 (315)
T 4f0j_A 22 YLDFTSQGQPLSMAYLDVAPKKANGRTILLMHGKNFCAGTWERTIDVLADAGYRVIAVDQVGFCKSSKPAH-YQYSFQQL 100 (315)
T ss_dssp EEEEEETTEEEEEEEEEECCSSCCSCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSS-CCCCHHHH
T ss_pred eEEEecCCCCeeEEEeecCCCCCCCCeEEEEcCCCCcchHHHHHHHHHHHCCCeEEEeecCCCCCCCCCCc-cccCHHHH
Confidence 33444433 34566766643 46789999999776644 4556666767799999999999999987653 36799999
Q ss_pred HHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCc
Q 020064 100 IDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPE 179 (331)
Q Consensus 100 ~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (331)
++++.++++.++.++++++|||+||.+++.+|.++|++++++|++++......... .........+.........
T Consensus 101 ~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 175 (315)
T 4f0j_A 101 AANTHALLERLGVARASVIGHSMGGMLATRYALLYPRQVERLVLVNPIGLEDWKAL-----GVPWRSVDDWYRRDLQTSA 175 (315)
T ss_dssp HHHHHHHHHHTTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCSSCHHHH-----TCCCCCHHHHHHHHTTCCH
T ss_pred HHHHHHHHHHhCCCceEEEEecHHHHHHHHHHHhCcHhhheeEEecCcccCCcccc-----cchhhhhHHHHhhcccCCh
Confidence 99999999999999999999999999999999999999999999998653221100 0000000011000000000
Q ss_pred chhhhhHHh-hccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhh
Q 020064 180 NERSCFVDA-YSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLL 258 (331)
Q Consensus 180 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (331)
......... +................... . .. ...... ............ ..+..
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~-~~------~~~~~~-~~~~~~~~~~~~-------~~~~~ 231 (315)
T 4f0j_A 176 EGIRQYQQATYYAGEWRPEFDRWVQMQAGM---------Y-RG------KGRESV-AWNSALTYDMIF-------TQPVV 231 (315)
T ss_dssp HHHHHHHHHHTSTTCCCGGGHHHHHHHHHH---------T-TS------TTHHHH-HHHHHHHHHHHH-------HCCCG
T ss_pred HHHHHHHHHHHhccccCCchHHHHHHHHHH---------h-hc------cCcchh-hHHHHHhcCccc-------cchhh
Confidence 000011100 00000000000000000000 0 00 000000 000000000000 22344
Q ss_pred hhccccccccEEEEecCCCCccC----------------CcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHH
Q 020064 259 DNIDNIRHINATIVQGRYDVCCP----------------MMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEK 322 (331)
Q Consensus 259 ~~l~~i~~~P~l~i~G~~D~~~~----------------~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~ 322 (331)
..+.++ ++|+|+++|++|.++| .+.++.+.+.++++++++++++||+++.++ ++++.+.|.+
T Consensus 232 ~~l~~~-~~P~lii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~-p~~~~~~i~~ 309 (315)
T 4f0j_A 232 YELDRL-QMPTLLLIGEKDNTAIGKDAAPAELKARLGNYAQLGKDAARRIPQATLVEFPDLGHTPQIQA-PERFHQALLE 309 (315)
T ss_dssp GGGGGC-CSCEEEEEETTCCCCTTGGGSCHHHHTTSCCHHHHHHHHHHHSTTEEEEEETTCCSCHHHHS-HHHHHHHHHH
T ss_pred hhcccC-CCCeEEEEecCCCcCccccccccccccccccchhhhhHHHhhcCCceEEEeCCCCcchhhhC-HHHHHHHHHH
Confidence 568888 5999999999999999 667788899999999999999999999997 9999999999
Q ss_pred HHHh
Q 020064 323 LKNL 326 (331)
Q Consensus 323 fl~~ 326 (331)
||++
T Consensus 310 fl~~ 313 (315)
T 4f0j_A 310 GLQT 313 (315)
T ss_dssp HHCC
T ss_pred Hhcc
Confidence 9975
|
| >2pl5_A Homoserine O-acetyltransferase; alpha/beta hydrolase superfa transferase; 2.20A {Leptospira interrogans} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-33 Score=230.02 Aligned_cols=281 Identities=16% Similarity=0.170 Sum_probs=167.8
Q ss_pred CceEEEEeCCCCC---CCcEEEeccCCCCCC--------------CCCccc---ccCCCCcEEEEecCCC--CCCCCCCC
Q 020064 32 IHTIYWEQSGNPT---GHPVVFLHGGPGGGT--------------TPSNRR---FFDPDFYRIILFDQRG--AGKSTPHA 89 (331)
Q Consensus 32 g~~l~~~~~g~~~---~~~vl~~HG~~~~~~--------------~~~~~~---~~~~~g~~vi~~D~~G--~G~s~~~~ 89 (331)
|.+++|...|+++ +|+|||+||++++.. |...+. .++++||+|+++|+|| +|.|....
T Consensus 30 g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~vi~~D~~G~~~G~s~~~~ 109 (366)
T 2pl5_A 30 PVVIAYETYGTLSSSKNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDTNQYFIICSNVIGGCKGSSGPLS 109 (366)
T ss_dssp SEEEEEEEEECCCTTSCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSSSSSSTTS
T ss_pred CceeeEEeccCcCCCCCceEEEecccCCcccccccccccccccchHHhhcCCcccccccccEEEEecCCCcccCCCCCCC
Confidence 4489999998643 689999999777654 333442 4557899999999999 89887532
Q ss_pred CC-----------CccchHHHHHHHHHHHHHhCCCcE-EEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhH
Q 020064 90 CL-----------DQNTTWDLIDDIEKLRQHLEIPEW-QVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWF 157 (331)
Q Consensus 90 ~~-----------~~~~~~~~~~~~~~~~~~~~~~~v-~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~ 157 (331)
.. ..++++++++|+.++++.++.+++ +|+||||||.+++.+|.++|++|+++|++++...........
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 189 (366)
T 2pl5_A 110 IHPETSTPYGSRFPFVSIQDMVKAQKLLVESLGIEKLFCVAGGSMGGMQALEWSIAYPNSLSNCIVMASTAEHSAMQIAF 189 (366)
T ss_dssp BCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHTTCSSEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSBCCHHHHHH
T ss_pred CCCCCCccccCCCCcccHHHHHHHHHHHHHHcCCceEEEEEEeCccHHHHHHHHHhCcHhhhheeEeccCccCCCccchh
Confidence 11 136999999999999999999998 899999999999999999999999999999876543211110
Q ss_pred hhcccccC-ChhhHH--hhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhh----cCCCChhhh-----
Q 020064 158 YEGGAAAI-YPDAWE--SFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTA----HLLPNEENI----- 225 (331)
Q Consensus 158 ~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~----- 225 (331)
.......+ ....|. .+....+... ..+ .................. +.. ..... .........
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~ 263 (366)
T 2pl5_A 190 NEVGRQAILSDPNWKNGLYDENSPRKG-LAL-ARMVGHITYLSDDKMREK---FGR-NPPRGNILSTDFAVGSYLIYQGE 263 (366)
T ss_dssp HHHHHHHHHTSTTCGGGTCSSSCCHHH-HHH-HHHHHHHTTBCHHHHHHH---HTT-SCCSSCTTTTTTTSCGGGGSTTC
T ss_pred hHHHHHHHHhCcccccccccccccccc-hHH-HHHhhccccCCHHHHHHH---hhh-hhhcccccchhhhHHHHHHHHHH
Confidence 00000000 000000 0000000000 000 000000000000000000 000 00000 000000000
Q ss_pred ---hcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCC----CCcEE
Q 020064 226 ---KRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWP----EADFK 298 (331)
Q Consensus 226 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~----~~~~~ 298 (331)
.......+...+..+. ...... ..+....+.++ ++|+|+|+|++|.++|++.++.+.+.++ +++++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~-----~~~~~~-~~~~~~~l~~i-~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (366)
T 2pl5_A 264 SFVDRFDANSYIYVTKALD-----HYSLGK-GKELTAALSNA-TCRFLVVSYSSDWLYPPAQSREIVKSLEAADKRVFYV 336 (366)
T ss_dssp CSSSCCCHHHHHHHHHHHH-----HCBCCS-HHHHHHHHTTC-CSEEEEEEETTCCSSCHHHHHHHHHHHHHTTCCEEEE
T ss_pred hhhcccChhHHHHHHhhhh-----hhcccc-ccchhhhhccC-CCCEEEEecCCCcccCHHHHHHHHHHhhhcccCeEEE
Confidence 0001111111111110 000000 12345578889 5999999999999999999999999998 89999
Q ss_pred Ee-cCCCCCCCcCCchhHHHHHHHHHHHh
Q 020064 299 VV-ADAGHSANEPGIAAELVATNEKLKNL 326 (331)
Q Consensus 299 ~~-~~~gH~~~~~~~~~~~~~~i~~fl~~ 326 (331)
++ +++||+++.++ ++++.+.|.+|+++
T Consensus 337 ~~~~~~gH~~~~e~-p~~~~~~i~~fl~~ 364 (366)
T 2pl5_A 337 ELQSGEGHDSFLLK-NPKQIEILKGFLEN 364 (366)
T ss_dssp EECCCBSSGGGGSC-CHHHHHHHHHHHHC
T ss_pred EeCCCCCcchhhcC-hhHHHHHHHHHHcc
Confidence 99 89999999997 99999999999975
|
| >3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-33 Score=219.46 Aligned_cols=236 Identities=18% Similarity=0.202 Sum_probs=161.5
Q ss_pred CceEEEEeCCCC-CCCcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHH---
Q 020064 32 IHTIYWEQSGNP-TGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLR--- 107 (331)
Q Consensus 32 g~~l~~~~~g~~-~~~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~--- 107 (331)
|.+++|...|++ ++|+||++||++++...+..+..+ .+||+|+++|+||||.|... ..++.+++++|+.+++
T Consensus 2 g~~l~y~~~g~~~~~~~vv~~hG~~~~~~~~~~~~~l-~~g~~v~~~d~~g~g~s~~~---~~~~~~~~~~~~~~~~~~~ 77 (245)
T 3e0x_A 2 NAMLHYVHVGNKKSPNTLLFVHGSGCNLKIFGELEKY-LEDYNCILLDLKGHGESKGQ---CPSTVYGYIDNVANFITNS 77 (245)
T ss_dssp CCCCCEEEEECTTCSCEEEEECCTTCCGGGGTTGGGG-CTTSEEEEECCTTSTTCCSC---CCSSHHHHHHHHHHHHHHC
T ss_pred CceeEEEecCCCCCCCEEEEEeCCcccHHHHHHHHHH-HhCCEEEEecCCCCCCCCCC---CCcCHHHHHHHHHHHHHhh
Confidence 447888888864 578999999987775555555555 48999999999999999843 3678999999999999
Q ss_pred ---HHhCCCcEEEEEeChhHHHHHHHHHh-CCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhh
Q 020064 108 ---QHLEIPEWQVFGGSWGSTLALAYSLA-HPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERS 183 (331)
Q Consensus 108 ---~~~~~~~v~lvG~S~Gg~~a~~~a~~-~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (331)
+.++ +++++|||+||.+++.+|.+ +|+ ++++|++++........ +..+..+........
T Consensus 78 ~~~~~~~--~~~l~G~S~Gg~~a~~~a~~~~p~-v~~lvl~~~~~~~~~~~------------~~~~~~~~~~~~~~~-- 140 (245)
T 3e0x_A 78 EVTKHQK--NITLIGYSMGGAIVLGVALKKLPN-VRKVVSLSGGARFDKLD------------KDFMEKIYHNQLDNN-- 140 (245)
T ss_dssp TTTTTCS--CEEEEEETHHHHHHHHHHTTTCTT-EEEEEEESCCSBCTTSC------------HHHHHHHHTTCCCHH--
T ss_pred hhHhhcC--ceEEEEeChhHHHHHHHHHHhCcc-ccEEEEecCCCcccccc------------HHHHHHHHHHHHHhh--
Confidence 8888 99999999999999999999 999 99999999876542111 111111111000000
Q ss_pred hhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccc
Q 020064 184 CFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDN 263 (331)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 263 (331)
+......... . ... ..........+ ..+...+.... ..+....+.+
T Consensus 141 -~~~~~~~~~~--~-~~~----------~~~~~~~~~~~--------~~~~~~~~~~~------------~~~~~~~~~~ 186 (245)
T 3e0x_A 141 -YLLECIGGID--N-PLS----------EKYFETLEKDP--------DIMINDLIACK------------LIDLVDNLKN 186 (245)
T ss_dssp -HHHHHHTCSC--S-HHH----------HHHHTTSCSSH--------HHHHHHHHHHH------------HCBCGGGGGG
T ss_pred -cCcccccccc--h-HHH----------HHHHHHHhcCc--------HHHHHHHHHhc------------cccHHHHHHh
Confidence 0000000000 0 000 00000000000 00111111100 2234456788
Q ss_pred cccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHH
Q 020064 264 IRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLK 324 (331)
Q Consensus 264 i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl 324 (331)
+ ++|+++++|++|.++|++..+.+.+.++++++++++++||+++.++ ++++.+.|.+||
T Consensus 187 ~-~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~-~~~~~~~i~~fl 245 (245)
T 3e0x_A 187 I-DIPVKAIVAKDELLTLVEYSEIIKKEVENSELKIFETGKHFLLVVN-AKGVAEEIKNFI 245 (245)
T ss_dssp C-CSCEEEEEETTCSSSCHHHHHHHHHHSSSEEEEEESSCGGGHHHHT-HHHHHHHHHTTC
T ss_pred C-CCCEEEEEeCCCCCCCHHHHHHHHHHcCCceEEEeCCCCcceEEec-HHHHHHHHHhhC
Confidence 8 5999999999999999999999999999999999999999999886 999999999885
|
| >2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-34 Score=228.63 Aligned_cols=259 Identities=18% Similarity=0.169 Sum_probs=162.1
Q ss_pred ceeEeCCCceEEEEeCCCC--CCCcEEEeccCCCCCC-CCC------cccccCCCCcEEEEecCCCCCCCCCCCCCCc--
Q 020064 25 GILKVSDIHTIYWEQSGNP--TGHPVVFLHGGPGGGT-TPS------NRRFFDPDFYRIILFDQRGAGKSTPHACLDQ-- 93 (331)
Q Consensus 25 ~~~~~~~g~~l~~~~~g~~--~~~~vl~~HG~~~~~~-~~~------~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~-- 93 (331)
+++..+ |.+++|...|++ ++|+|||+||++++.. +|. .+..+ .++|+|+++|+||||.|........
T Consensus 14 ~~~~~~-~~~l~y~~~G~~~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~L-~~~~~vi~~D~~G~G~s~~~~~~~~~~ 91 (286)
T 2qmq_A 14 HSVETP-YGSVTFTVYGTPKPKRPAIFTYHDVGLNYKSCFQPLFRFGDMQEI-IQNFVRVHVDAPGMEEGAPVFPLGYQY 91 (286)
T ss_dssp EEEEET-TEEEEEEEESCCCTTCCEEEEECCTTCCHHHHHHHHHTSHHHHHH-HTTSCEEEEECTTTSTTCCCCCTTCCC
T ss_pred cccccC-CeEEEEEeccCCCCCCCeEEEeCCCCCCchhhhhhhhhhchhHHH-hcCCCEEEecCCCCCCCCCCCCCCCCc
Confidence 444554 559999999975 5789999999877754 122 34444 4579999999999998864322122
Q ss_pred cchHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhh
Q 020064 94 NTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESF 173 (331)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (331)
++++++++|+.++++.++.++++++||||||.+++.+|..+|++++++|++++.........+... .
T Consensus 92 ~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~-------------~ 158 (286)
T 2qmq_A 92 PSLDQLADMIPCILQYLNFSTIIGVGVGAGAYILSRYALNHPDTVEGLVLINIDPNAKGWMDWAAH-------------K 158 (286)
T ss_dssp CCHHHHHHTHHHHHHHHTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCHHHHHHH-------------H
T ss_pred cCHHHHHHHHHHHHHHhCCCcEEEEEEChHHHHHHHHHHhChhheeeEEEECCCCcccchhhhhhh-------------h
Confidence 489999999999999999999999999999999999999999999999999986543211111000 0
Q ss_pred hccCCcchhhhhHHhhccc-cCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCC
Q 020064 174 RDLIPENERSCFVDAYSKR-LNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFP 252 (331)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (331)
...............+... ....... ....+... .. . ....... ..+...+. .. .
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~--~~-~-~~~~~~~-----~~~~~~~~--------~~---~ 214 (286)
T 2qmq_A 159 LTGLTSSIPDMILGHLFSQEELSGNSE----LIQKYRGI--IQ-H-APNLENI-----ELYWNSYN--------NR---R 214 (286)
T ss_dssp HHHTTSCHHHHHHHHHSCHHHHHTTCH----HHHHHHHH--HH-T-CTTHHHH-----HHHHHHHH--------TC---C
T ss_pred hccccccchHHHHHHHhcCCCCCcchH----HHHHHHHH--HH-h-cCCcchH-----HHHHHHHh--------hh---h
Confidence 0000000000111110000 0000000 00000000 00 0 0000000 00000000 00 0
Q ss_pred CcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCC-CCcEEEecCCCCCCCcCCchhHHHHHHHHHHH
Q 020064 253 SDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWP-EADFKVVADAGHSANEPGIAAELVATNEKLKN 325 (331)
Q Consensus 253 ~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~ 325 (331)
........+.++ ++|+|+|+|++|.++| ...+.+.+..+ ++++++++++||+++.++ |+++.+.|.+|++
T Consensus 215 ~~~~~~~~l~~i-~~P~lii~G~~D~~~~-~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~-p~~~~~~i~~fl~ 285 (286)
T 2qmq_A 215 DLNFERGGETTL-KCPVMLVVGDQAPHED-AVVECNSKLDPTQTSFLKMADSGGQPQLTQ-PGKLTEAFKYFLQ 285 (286)
T ss_dssp CCCSEETTEECC-CSCEEEEEETTSTTHH-HHHHHHHHSCGGGEEEEEETTCTTCHHHHC-HHHHHHHHHHHHC
T ss_pred hhhhhhchhccC-CCCEEEEecCCCcccc-HHHHHHHHhcCCCceEEEeCCCCCcccccC-hHHHHHHHHHHhc
Confidence 011113467888 5999999999999998 45666666666 899999999999999997 9999999999985
|
| >1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-34 Score=221.94 Aligned_cols=234 Identities=18% Similarity=0.176 Sum_probs=151.7
Q ss_pred CCceEEEEeCCCCCCCcEEEeccCCCCCCCC-CcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHH---H
Q 020064 31 DIHTIYWEQSGNPTGHPVVFLHGGPGGGTTP-SNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEK---L 106 (331)
Q Consensus 31 ~g~~l~~~~~g~~~~~~vl~~HG~~~~~~~~-~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~---~ 106 (331)
++..++|. + ++++|||+||++++...| .....+.++||+|+++|+||||.|.... ..++++++++|+.+ +
T Consensus 6 ~~~~~~~~--~--~~~~vvllHG~~~~~~~~~~~~~~L~~~g~~vi~~D~~GhG~s~~~~--~~~~~~~~~~d~~~~~~~ 79 (247)
T 1tqh_A 6 PPKPFFFE--A--GERAVLLLHGFTGNSADVRMLGRFLESKGYTCHAPIYKGHGVPPEEL--VHTGPDDWWQDVMNGYEF 79 (247)
T ss_dssp CCCCEEEC--C--SSCEEEEECCTTCCTHHHHHHHHHHHHTTCEEEECCCTTSSSCHHHH--TTCCHHHHHHHHHHHHHH
T ss_pred CCCCeeeC--C--CCcEEEEECCCCCChHHHHHHHHHHHHCCCEEEecccCCCCCCHHHh--cCCCHHHHHHHHHHHHHH
Confidence 55466665 4 468899999987765544 4555565689999999999999775322 24577777766654 6
Q ss_pred HHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhH
Q 020064 107 RQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFV 186 (331)
Q Consensus 107 ~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (331)
++.++.++++|+||||||.+++.+|.++| |+++|+++++........ ..... ....
T Consensus 80 l~~~~~~~~~lvG~SmGG~ia~~~a~~~p--v~~lvl~~~~~~~~~~~~-------------~~~~~---------~~~~ 135 (247)
T 1tqh_A 80 LKNKGYEKIAVAGLSLGGVFSLKLGYTVP--IEGIVTMCAPMYIKSEET-------------MYEGV---------LEYA 135 (247)
T ss_dssp HHHHTCCCEEEEEETHHHHHHHHHHTTSC--CSCEEEESCCSSCCCHHH-------------HHHHH---------HHHH
T ss_pred HHHcCCCeEEEEEeCHHHHHHHHHHHhCC--CCeEEEEcceeecCcchh-------------hhHHH---------HHHH
Confidence 67778899999999999999999999999 999998776443110000 00000 0000
Q ss_pred HhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhcccccc
Q 020064 187 DAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRH 266 (331)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 266 (331)
..+..... ......... . ..... .. ...+ ..+... ..+..+.+.++ +
T Consensus 136 ~~~~~~~~-~~~~~~~~~---~---~~~~~---~~--------~~~~-~~~~~~-------------~~~~~~~l~~i-~ 182 (247)
T 1tqh_A 136 REYKKREG-KSEEQIEQE---M---EKFKQ---TP--------MKTL-KALQEL-------------IADVRDHLDLI-Y 182 (247)
T ss_dssp HHHHHHHT-CCHHHHHHH---H---HHHTT---SC--------CTTH-HHHHHH-------------HHHHHHTGGGC-C
T ss_pred HHhhcccc-cchHHHHhh---h---hcccC---CC--------HHHH-HHHHHH-------------HHHHHhhcccC-C
Confidence 00000000 000000000 0 00000 00 0000 000000 11344578889 5
Q ss_pred ccEEEEecCCCCccCCcchHHHHHhCCC--CcEEEecCCCCCCCcCCchhHHHHHHHHHHHhh
Q 020064 267 INATIVQGRYDVCCPMMSAWDLHKAWPE--ADFKVVADAGHSANEPGIAAELVATNEKLKNLI 327 (331)
Q Consensus 267 ~P~l~i~G~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 327 (331)
+|+|+|+|++|.++|++.++.+.+.+|+ +++++++++||+++.++.++++.+.|.+|++++
T Consensus 183 ~P~Lii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~~i~~Fl~~~ 245 (247)
T 1tqh_A 183 APTFVVQARHDEMINPDSANIIYNEIESPVKQIKWYEQSGHVITLDQEKDQLHEDIYAFLESL 245 (247)
T ss_dssp SCEEEEEETTCSSSCTTHHHHHHHHCCCSSEEEEEETTCCSSGGGSTTHHHHHHHHHHHHHHS
T ss_pred CCEEEEecCCCCCCCcchHHHHHHhcCCCceEEEEeCCCceeeccCccHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999986 589999999999988754899999999999864
|
| >1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-33 Score=225.64 Aligned_cols=230 Identities=9% Similarity=0.076 Sum_probs=146.8
Q ss_pred ccceeEeCCCceEEEEeCCCC-----CCCcEEEeccCCCC-CCCCCcccccCCCCcEEEEecCCCC-CCCCCCCCCCccc
Q 020064 23 STGILKVSDIHTIYWEQSGNP-----TGHPVVFLHGGPGG-GTTPSNRRFFDPDFYRIILFDQRGA-GKSTPHACLDQNT 95 (331)
Q Consensus 23 ~~~~~~~~~g~~l~~~~~g~~-----~~~~vl~~HG~~~~-~~~~~~~~~~~~~g~~vi~~D~~G~-G~s~~~~~~~~~~ 95 (331)
+..++.+.+|.+++|+..++. .+|+|||+||++++ ..|...+..+.+.||+|+++|+||| |.|+... ..++
T Consensus 8 ~~~~i~~~dG~~l~~~~~~p~~~~~~~~~~VvllHG~g~~~~~~~~~~~~L~~~G~~Vi~~D~rGh~G~S~~~~--~~~~ 85 (305)
T 1tht_A 8 IAHVLRVNNGQELHVWETPPKENVPFKNNTILIASGFARRMDHFAGLAEYLSTNGFHVFRYDSLHHVGLSSGSI--DEFT 85 (305)
T ss_dssp EEEEEEETTTEEEEEEEECCCTTSCCCSCEEEEECTTCGGGGGGHHHHHHHHTTTCCEEEECCCBCC----------CCC
T ss_pred eEEEEEcCCCCEEEEEEecCcccCCCCCCEEEEecCCccCchHHHHHHHHHHHCCCEEEEeeCCCCCCCCCCcc--ccee
Confidence 456788889989999877642 46889999997766 4455566777678999999999999 9998654 3578
Q ss_pred hHHHHHHHHHHHHHh---CCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHh
Q 020064 96 TWDLIDDIEKLRQHL---EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWES 172 (331)
Q Consensus 96 ~~~~~~~~~~~~~~~---~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (331)
++++++|+..+++.+ +.++++|+||||||.+++.+|.+ | +++++|++++....................
T Consensus 86 ~~~~~~D~~~~~~~l~~~~~~~~~lvGhSmGG~iA~~~A~~-~-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~------ 157 (305)
T 1tht_A 86 MTTGKNSLCTVYHWLQTKGTQNIGLIAASLSARVAYEVISD-L-ELSFLITAVGVVNLRDTLEKALGFDYLSLP------ 157 (305)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHTTT-S-CCSEEEEESCCSCHHHHHHHHHSSCGGGSC------
T ss_pred hHHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHhCc-c-CcCEEEEecCchhHHHHHHHHhhhhhhhcc------
Confidence 889999998888765 78899999999999999999998 7 899999988754321111000000000000
Q ss_pred hhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCC
Q 020064 173 FRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFP 252 (331)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (331)
....+. ... ...... ....+...... .. ..
T Consensus 158 -~~~~~~---------~~~-~~~~~~------------------------------~~~~~~~~~~~--------~~-~~ 187 (305)
T 1tht_A 158 -IDELPN---------DLD-FEGHKL------------------------------GSEVFVRDCFE--------HH-WD 187 (305)
T ss_dssp -GGGCCS---------EEE-ETTEEE------------------------------EHHHHHHHHHH--------TT-CS
T ss_pred -hhhCcc---------ccc-cccccc------------------------------CHHHHHHHHHh--------cc-cc
Confidence 000000 000 000000 00000000000 00 00
Q ss_pred CcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhC--CCCcEEEecCCCCCCCcCCchhH
Q 020064 253 SDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAW--PEADFKVVADAGHSANEPGIAAE 315 (331)
Q Consensus 253 ~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~ 315 (331)
...+..+.+.++ ++|+|+|+|++|.++|++.++.+.+.+ +++++++++++||.++ ++ |+.
T Consensus 188 ~~~~~~~~l~~i-~~PvLii~G~~D~~vp~~~~~~l~~~i~~~~~~l~~i~~agH~~~-e~-p~~ 249 (305)
T 1tht_A 188 TLDSTLDKVANT-SVPLIAFTANNDDWVKQEEVYDMLAHIRTGHCKLYSLLGSSHDLG-EN-LVV 249 (305)
T ss_dssp SHHHHHHHHTTC-CSCEEEEEETTCTTSCHHHHHHHHTTCTTCCEEEEEETTCCSCTT-SS-HHH
T ss_pred chhhHHHHHhhc-CCCEEEEEeCCCCccCHHHHHHHHHhcCCCCcEEEEeCCCCCchh-hC-chH
Confidence 011234567888 599999999999999999999999987 4789999999999986 54 654
|
| >3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-34 Score=226.79 Aligned_cols=265 Identities=12% Similarity=0.105 Sum_probs=165.3
Q ss_pred CCccceeEeCCCceEEEEeCCCCCCCcEEEeccC--CCCCC-CCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchH
Q 020064 21 PYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGG--PGGGT-TPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTW 97 (331)
Q Consensus 21 ~~~~~~~~~~~g~~l~~~~~g~~~~~~vl~~HG~--~~~~~-~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~ 97 (331)
..+..++.+++| .++|...+ ++|+|||+||+ .++.. |..++..+ .++|+|+++|+||||.|+.... ..++++
T Consensus 20 ~~~~~~v~~~~~-~~~~~~~~--~~p~vv~lHG~G~~~~~~~~~~~~~~L-~~~~~vi~~D~~G~G~S~~~~~-~~~~~~ 94 (292)
T 3l80_A 20 ALNKEMVNTLLG-PIYTCHRE--GNPCFVFLSGAGFFSTADNFANIIDKL-PDSIGILTIDAPNSGYSPVSNQ-ANVGLR 94 (292)
T ss_dssp CCEEEEECCTTS-CEEEEEEC--CSSEEEEECCSSSCCHHHHTHHHHTTS-CTTSEEEEECCTTSTTSCCCCC-TTCCHH
T ss_pred ccCcceEEecCc-eEEEecCC--CCCEEEEEcCCCCCcHHHHHHHHHHHH-hhcCeEEEEcCCCCCCCCCCCc-ccccHH
Confidence 445678888777 78877433 56899999974 33333 44444444 5899999999999999983332 468999
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccC
Q 020064 98 DLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLI 177 (331)
Q Consensus 98 ~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (331)
++++|+.++++.++.++++|+||||||.+++.+|.++|++|+++|++++....... ........+.. ......+
T Consensus 95 ~~~~~l~~~l~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~-----~~~~~~~~~~~-~~~~~~~ 168 (292)
T 3l80_A 95 DWVNAILMIFEHFKFQSYLLCVHSIGGFAALQIMNQSSKACLGFIGLEPTTVMIYR-----AGFSSDLYPQL-ALRRQKL 168 (292)
T ss_dssp HHHHHHHHHHHHSCCSEEEEEEETTHHHHHHHHHHHCSSEEEEEEEESCCCHHHHH-----HCTTSSSSHHH-HHHHHTC
T ss_pred HHHHHHHHHHHHhCCCCeEEEEEchhHHHHHHHHHhCchheeeEEEECCCCcchhh-----hccccccchhH-HHHHHHH
Confidence 99999999999999999999999999999999999999999999999976543210 00000011110 0011111
Q ss_pred Ccchhhh-hHHhhccccCCCchHHHH-HHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhh-hhhhccCCCCCc
Q 020064 178 PENERSC-FVDAYSKRLNSDDKETQY-AAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIEN-HYFLNKGFFPSD 254 (331)
Q Consensus 178 ~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 254 (331)
....... ........+......... ....... ..+..... .......... .
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~l~~~~~~~~~~-~ 222 (292)
T 3l80_A 169 KTAADRLNYLKDLSRSHFSSQQFKQLWRGYDYCQ-------------------------RQLNDVQSLPDFKIRLALG-E 222 (292)
T ss_dssp CSHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHH-------------------------HHHHTTTTSTTCCSSCCCC-G
T ss_pred hccCchhhhHhhccccccCHHHHHHhHHHHHHHH-------------------------HHHHhhhhccccchhhhhc-c
Confidence 1111111 111111111100000000 0000000 00000000 0000000000 1
Q ss_pred chhhhhccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhhh
Q 020064 255 SFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNLIK 328 (331)
Q Consensus 255 ~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~ 328 (331)
.+..+.+.+ + +|+|+|+|++|..++++ + .+.+.+++.+ ++++++||+++.++ |+++.+.|.+|+++.+
T Consensus 223 ~~~~~~l~~-~-~P~lii~g~~D~~~~~~-~-~~~~~~~~~~-~~~~~~gH~~~~e~-p~~~~~~i~~fl~~~~ 290 (292)
T 3l80_A 223 EDFKTGISE-K-IPSIVFSESFREKEYLE-S-EYLNKHTQTK-LILCGQHHYLHWSE-TNSILEKVEQLLSNHE 290 (292)
T ss_dssp GGGCCCCCT-T-SCEEEEECGGGHHHHHT-S-TTCCCCTTCE-EEECCSSSCHHHHC-HHHHHHHHHHHHHTCT
T ss_pred hhhhhccCC-C-CCEEEEEccCccccchH-H-HHhccCCCce-eeeCCCCCcchhhC-HHHHHHHHHHHHHhcc
Confidence 222234555 4 99999999999999988 6 7888889999 99999999999997 9999999999998754
|
| >2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-34 Score=233.42 Aligned_cols=125 Identities=25% Similarity=0.344 Sum_probs=105.5
Q ss_pred ccceeEeCCCceEEEEeCCCC--CCCcEEEeccCCCCCC-CCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHH
Q 020064 23 STGILKVSDIHTIYWEQSGNP--TGHPVVFLHGGPGGGT-TPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDL 99 (331)
Q Consensus 23 ~~~~~~~~~g~~l~~~~~g~~--~~~~vl~~HG~~~~~~-~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~ 99 (331)
+..++++ +|.+++|...|++ ++|+|||+||++++.. |..++..+.+.||+|+++|+||||.|..+.....++.+++
T Consensus 4 ~~~~~~~-~g~~l~y~~~G~~~~~~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~vi~~d~~g~g~s~~~~~~~~~~~~~~ 82 (356)
T 2e3j_A 4 VHRILNC-RGTRIHAVADSPPDQQGPLVVLLHGFPESWYSWRHQIPALAGAGYRVVAIDQRGYGRSSKYRVQKAYRIKEL 82 (356)
T ss_dssp CEEEEEE-TTEEEEEEEECCTTCCSCEEEEECCTTCCGGGGTTTHHHHHHTTCEEEEECCTTSTTSCCCCSGGGGSHHHH
T ss_pred eEEEEcc-CCeEEEEEEecCCCCCCCEEEEECCCCCcHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCcccccCHHHH
Confidence 3455565 5669999999864 6789999999776644 4455666666799999999999999987653345789999
Q ss_pred HHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEecccc
Q 020064 100 IDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFL 148 (331)
Q Consensus 100 ~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~ 148 (331)
++|+..+++.++.++++++||||||.+++.+|.++|++++++|+++++.
T Consensus 83 ~~~~~~~~~~l~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 131 (356)
T 2e3j_A 83 VGDVVGVLDSYGAEQAFVVGHDWGAPVAWTFAWLHPDRCAGVVGISVPF 131 (356)
T ss_dssp HHHHHHHHHHTTCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSCC
T ss_pred HHHHHHHHHHcCCCCeEEEEECHhHHHHHHHHHhCcHhhcEEEEECCcc
Confidence 9999999999999999999999999999999999999999999999765
|
| >3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-33 Score=220.91 Aligned_cols=248 Identities=12% Similarity=0.049 Sum_probs=155.4
Q ss_pred CCCcEEEeccCCCCCC-CCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCC-CcEEEEEeC
Q 020064 44 TGHPVVFLHGGPGGGT-TPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEI-PEWQVFGGS 121 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~-~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~lvG~S 121 (331)
.+|+|||+||++++.. |..++..+.++||+|+++|+||||.|+.+.. ..++++++++|+.++++.++. ++++|+|||
T Consensus 3 ~g~~vv~lHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~l~~~l~~l~~~~~~~lvGhS 81 (258)
T 3dqz_A 3 RKHHFVLVHNAYHGAWIWYKLKPLLESAGHRVTAVELAASGIDPRPIQ-AVETVDEYSKPLIETLKSLPENEEVILVGFS 81 (258)
T ss_dssp CCCEEEEECCTTCCGGGGTTHHHHHHHTTCEEEEECCTTSTTCSSCGG-GCCSHHHHHHHHHHHHHTSCTTCCEEEEEET
T ss_pred CCCcEEEECCCCCccccHHHHHHHHHhCCCEEEEecCCCCcCCCCCCC-ccccHHHhHHHHHHHHHHhcccCceEEEEeC
Confidence 4689999999776644 5556666767799999999999999987542 347999999999999999998 899999999
Q ss_pred hhHHHHHHHHHhCCCceeeEEEeccccchhhhhhh-Hhhc---ccccCChhhHHhhhccCCcchhhhh-HHhhccccCCC
Q 020064 122 WGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDW-FYEG---GAAAIYPDAWESFRDLIPENERSCF-VDAYSKRLNSD 196 (331)
Q Consensus 122 ~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 196 (331)
|||.+++.+|.++|++++++|++++.......... .... .........+..............+ ...+...+...
T Consensus 82 ~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (258)
T 3dqz_A 82 FGGINIALAADIFPAKIKVLVFLNAFLPDTTHVPSHVLDKYMEMPGGLGDCEFSSHETRNGTMSLLKMGPKFMKARLYQN 161 (258)
T ss_dssp THHHHHHHHHTTCGGGEEEEEEESCCCCCSSSCTTHHHHHHHTSTTCCTTCEEEEEEETTEEEEEEECCHHHHHHHTSTT
T ss_pred hhHHHHHHHHHhChHhhcEEEEecCCCCCCCCcchHHHHHhcccchhhhhcccchhhhhccChhhhhhhHHHHHHHhhcc
Confidence 99999999999999999999999986543221100 0000 0000000000000000000000000 00000000000
Q ss_pred chHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCC
Q 020064 197 DKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRY 276 (331)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~ 276 (331)
............ .... ..+...+. ........... ++|+++|+|++
T Consensus 162 ~~~~~~~~~~~~---------~~~~---------~~~~~~~~---------------~~~~~~~~~~~-~~P~l~i~g~~ 207 (258)
T 3dqz_A 162 CPIEDYELAKML---------HRQG---------SFFTEDLS---------------KKEKFSEEGYG-SVQRVYVMSSE 207 (258)
T ss_dssp SCHHHHHHHHHH---------CCCE---------ECCHHHHH---------------TSCCCCTTTGG-GSCEEEEEETT
T ss_pred CCHHHHHHHHHh---------ccCC---------chhhhhhh---------------ccccccccccc-cCCEEEEECCC
Confidence 000000000000 0000 00000000 00011112223 59999999999
Q ss_pred CCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhh
Q 020064 277 DVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNLI 327 (331)
Q Consensus 277 D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 327 (331)
|.++|++.++.+.+.++++++++++++||+++.++ |+++.+.|.+|+++.
T Consensus 208 D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~-p~~~~~~i~~fl~~~ 257 (258)
T 3dqz_A 208 DKAIPCDFIRWMIDNFNVSKVYEIDGGDHMVMLSK-PQKLFDSLSAIATDY 257 (258)
T ss_dssp CSSSCHHHHHHHHHHSCCSCEEEETTCCSCHHHHS-HHHHHHHHHHHHHHT
T ss_pred CeeeCHHHHHHHHHhCCcccEEEcCCCCCchhhcC-hHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999997 999999999999863
|
| >3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-34 Score=227.82 Aligned_cols=257 Identities=14% Similarity=0.089 Sum_probs=164.3
Q ss_pred eEEEEeCCCCCCCcEEEeccCCCCCCC-CCcccccCCCCcEEEEecCCCCCCCCCCCC-C-CccchHHHHHHHHHHHHHh
Q 020064 34 TIYWEQSGNPTGHPVVFLHGGPGGGTT-PSNRRFFDPDFYRIILFDQRGAGKSTPHAC-L-DQNTTWDLIDDIEKLRQHL 110 (331)
Q Consensus 34 ~l~~~~~g~~~~~~vl~~HG~~~~~~~-~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~-~-~~~~~~~~~~~~~~~~~~~ 110 (331)
+++|...|+ .+|+|||+||++++... ...+..+ .+||+|+++|+||||.|..... . ...+++++++|+.++++.+
T Consensus 18 ~~~~~~~g~-~~~~vv~lHG~~~~~~~~~~~~~~l-~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (282)
T 3qvm_A 18 RNNINITGG-GEKTVLLAHGFGCDQNMWRFMLPEL-EKQFTVIVFDYVGSGQSDLESFSTKRYSSLEGYAKDVEEILVAL 95 (282)
T ss_dssp HTTCEEEEC-SSCEEEEECCTTCCGGGGTTTHHHH-HTTSEEEECCCTTSTTSCGGGCCTTGGGSHHHHHHHHHHHHHHT
T ss_pred hcceeecCC-CCCeEEEECCCCCCcchHHHHHHHH-hcCceEEEEecCCCCCCCCCCCCccccccHHHHHHHHHHHHHHc
Confidence 445666664 34899999997776554 4444455 4599999999999999986541 1 2248999999999999999
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhc
Q 020064 111 EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYS 190 (331)
Q Consensus 111 ~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (331)
+.++++++|||+||.+++.+|.++|++++++|++++............ .......+.......... ...+...+.
T Consensus 96 ~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 170 (282)
T 3qvm_A 96 DLVNVSIIGHSVSSIIAGIASTHVGDRISDITMICPSPCFMNFPPDYV----GGFERDDLEELINLMDKN-YIGWANYLA 170 (282)
T ss_dssp TCCSEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBSBEETTTEE----CSBCHHHHHHHHHHHHHC-HHHHHHHHH
T ss_pred CCCceEEEEecccHHHHHHHHHhCchhhheEEEecCcchhccCchhhh----chhccccHHHHHHHHhcc-hhhHHHHHH
Confidence 999999999999999999999999999999999998764322110000 000001111100000000 000000000
Q ss_pred cccC--CCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhcccccccc
Q 020064 191 KRLN--SDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHIN 268 (331)
Q Consensus 191 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P 268 (331)
.... .............+.. ..+. .......... ..+....+.++ ++|
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~---------~~~~--------~~~~~~~~~~------------~~~~~~~~~~i-~~P 220 (282)
T 3qvm_A 171 PLVMGASHSSELIGELSGSFCT---------TDPI--------VAKTFAKATF------------FSDYRSLLEDI-STP 220 (282)
T ss_dssp HHHHCTTSCHHHHHHHHHHHHH---------SCHH--------HHHHHHHHHH------------SCBCGGGGGGC-CSC
T ss_pred hhccCCccchhhHHHHHHHHhc---------CCcH--------HHHHHHHHHh------------cccHHHHHhcC-CCC
Confidence 0000 0000000000000000 0000 0000000000 22344577888 599
Q ss_pred EEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhhh
Q 020064 269 ATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNLIK 328 (331)
Q Consensus 269 ~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~ 328 (331)
+|+++|++|.++|++.++.+.+.++++++++++++||+++.++ ++++.+.|.+|+++..
T Consensus 221 ~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~-~~~~~~~i~~fl~~~~ 279 (282)
T 3qvm_A 221 ALIFQSAKDSLASPEVGQYMAENIPNSQLELIQAEGHCLHMTD-AGLITPLLIHFIQNNQ 279 (282)
T ss_dssp EEEEEEEECTTCCHHHHHHHHHHSSSEEEEEEEEESSCHHHHC-HHHHHHHHHHHHHHC-
T ss_pred eEEEEeCCCCcCCHHHHHHHHHhCCCCcEEEecCCCCcccccC-HHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999987 9999999999998764
|
| >3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-33 Score=222.57 Aligned_cols=249 Identities=9% Similarity=-0.007 Sum_probs=155.5
Q ss_pred CCCCcEEEeccCCCCCC-CCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhC-CCcEEEEEe
Q 020064 43 PTGHPVVFLHGGPGGGT-TPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLE-IPEWQVFGG 120 (331)
Q Consensus 43 ~~~~~vl~~HG~~~~~~-~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~lvG~ 120 (331)
.++|+|||+||++++.. |..++..+.++||+|+++|+||||.|..... ..++++++++|+.++++.++ .++++|+||
T Consensus 10 ~~~~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~-~~~~~~~~~~~~~~~l~~l~~~~~~~lvGh 88 (267)
T 3sty_A 10 FVKKHFVLVHAAFHGAWCWYKIVALMRSSGHNVTALDLGASGINPKQAL-QIPNFSDYLSPLMEFMASLPANEKIILVGH 88 (267)
T ss_dssp CCCCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTCSCCGG-GCCSHHHHHHHHHHHHHTSCTTSCEEEEEE
T ss_pred CCCCeEEEECCCCCCcchHHHHHHHHHhcCCeEEEeccccCCCCCCcCC-ccCCHHHHHHHHHHHHHhcCCCCCEEEEEE
Confidence 46789999999776644 4555666666799999999999999987642 24799999999999999994 889999999
Q ss_pred ChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhh-Hh-hc--ccccCChhhHHhhhccCCcc--hhhhhHHhhccccC
Q 020064 121 SWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDW-FY-EG--GAAAIYPDAWESFRDLIPEN--ERSCFVDAYSKRLN 194 (331)
Q Consensus 121 S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~-~~-~~--~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 194 (331)
||||.+++.+|.++|++|+++|++++.......... .. .. .........+. +....... ........+...+.
T Consensus 89 S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 167 (267)
T 3sty_A 89 ALGGLAISKAMETFPEKISVAVFLSGLMPGPNIDATTVCTKAGSAVLGQLDNCVT-YENGPTNPPTTLIAGPKFLATNVY 167 (267)
T ss_dssp TTHHHHHHHHHHHSGGGEEEEEEESCCCCBTTBCHHHHHHHHHHTTTTCTTCEEE-CTTCTTSCCCEEECCHHHHHHHTS
T ss_pred cHHHHHHHHHHHhChhhcceEEEecCCCCCCcchHHHHHHHhcccchhhhhhhhh-hhhhhhcccchhhhhHHHHHHhhc
Confidence 999999999999999999999999986643321100 00 00 00000000000 00000000 00000000000000
Q ss_pred CCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEec
Q 020064 195 SDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQG 274 (331)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G 274 (331)
............... ... ....+ .. +. ........... ++|+++|+|
T Consensus 168 ~~~~~~~~~~~~~~~-----~~~-----------~~~~~-~~--------~~-------~~~~~~~~~~~-~~P~l~i~g 214 (267)
T 3sty_A 168 HLSPIEDLALATALV-----RPL-----------YLYLA-ED--------IS-------KEVVLSSKRYG-SVKRVFIVA 214 (267)
T ss_dssp TTSCHHHHHHHHHHC-----CCE-----------ECCCH-HH--------HH-------HHCCCCTTTGG-GSCEEEEEC
T ss_pred ccCCHHHHHHHHHhh-----ccc-----------hhHHH-HH--------hh-------cchhccccccc-CCCEEEEEe
Confidence 000000000000000 000 00000 00 00 00001111122 499999999
Q ss_pred CCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhh
Q 020064 275 RYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNLI 327 (331)
Q Consensus 275 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 327 (331)
++|.++|++..+.+.+.++++++++++++||+++.++ |+++.+.|.+|+++.
T Consensus 215 ~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~-p~~~~~~i~~fl~~~ 266 (267)
T 3sty_A 215 TENDALKKEFLKLMIEKNPPDEVKEIEGSDHVTMMSK-PQQLFTTLLSIANKY 266 (267)
T ss_dssp CCSCHHHHHHHHHHHHHSCCSEEEECTTCCSCHHHHS-HHHHHHHHHHHHHHC
T ss_pred CCCCccCHHHHHHHHHhCCCceEEEeCCCCccccccC-hHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999997 999999999999874
|
| >3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-33 Score=222.76 Aligned_cols=246 Identities=17% Similarity=0.131 Sum_probs=168.7
Q ss_pred CCCccceeEe---CCCceEEEEeCCCC--CCCcEEEeccCCCCCCCC-C--cccccCCCCcEEEEecCCCCCCCCCCCCC
Q 020064 20 EPYSTGILKV---SDIHTIYWEQSGNP--TGHPVVFLHGGPGGGTTP-S--NRRFFDPDFYRIILFDQRGAGKSTPHACL 91 (331)
Q Consensus 20 ~~~~~~~~~~---~~g~~l~~~~~g~~--~~~~vl~~HG~~~~~~~~-~--~~~~~~~~g~~vi~~D~~G~G~s~~~~~~ 91 (331)
.+.+.+++++ .+|.+++|...++. ++|+||++||++++...+ . ....+.+.||+|+++|+||||.|....
T Consensus 7 ~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~-- 84 (270)
T 3llc_A 7 RPIETHAITVGQGSDARSIAALVRAPAQDERPTCIWLGGYRSDMTGTKALEMDDLAASLGVGAIRFDYSGHGASGGAF-- 84 (270)
T ss_dssp CCEEEEEEEESSGGGCEEEEEEEECCSSTTSCEEEEECCTTCCTTSHHHHHHHHHHHHHTCEEEEECCTTSTTCCSCG--
T ss_pred CCCCcceEEEeeccCcceEEEEeccCCCCCCCeEEEECCCccccccchHHHHHHHHHhCCCcEEEeccccCCCCCCcc--
Confidence 3455666666 67779999855432 278999999987664332 2 344455689999999999999998665
Q ss_pred CccchHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHh---CC---CceeeEEEeccccchhhhhhhHhhcccccC
Q 020064 92 DQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLA---HP---DKVTGLVLRGIFLLRKKEIDWFYEGGAAAI 165 (331)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~---~p---~~v~~li~~~~~~~~~~~~~~~~~~~~~~~ 165 (331)
..++++++++|+.++++.++.++++++|||+||.+++.+|.+ +| ++++++|++++.........+
T Consensus 85 ~~~~~~~~~~d~~~~~~~l~~~~~~l~G~S~Gg~~a~~~a~~~~~~p~~~~~v~~~il~~~~~~~~~~~~~--------- 155 (270)
T 3llc_A 85 RDGTISRWLEEALAVLDHFKPEKAILVGSSMGGWIALRLIQELKARHDNPTQVSGMVLIAPAPDFTSDLIE--------- 155 (270)
T ss_dssp GGCCHHHHHHHHHHHHHHHCCSEEEEEEETHHHHHHHHHHHHHHTCSCCSCEEEEEEEESCCTTHHHHTTG---------
T ss_pred ccccHHHHHHHHHHHHHHhccCCeEEEEeChHHHHHHHHHHHHHhccccccccceeEEecCcccchhhhhh---------
Confidence 467899999999999999999999999999999999999999 99 999999999987653221100
Q ss_pred ChhhHHhhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhh
Q 020064 166 YPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYF 245 (331)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (331)
..........+.......... .....+ ......+.....
T Consensus 156 ---------~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~----~~~~~~~~~~~~------- 194 (270)
T 3llc_A 156 ---------PLLGDRERAELAENGYFEEVS---------------------EYSPEP----NIFTRALMEDGR------- 194 (270)
T ss_dssp ---------GGCCHHHHHHHHHHSEEEECC---------------------TTCSSC----EEEEHHHHHHHH-------
T ss_pred ---------hhhhhhhhhhhhccCcccChh---------------------hcccch----hHHHHHHHhhhh-------
Confidence 000000000000000000000 000000 000000000000
Q ss_pred hccCCCCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCCC--CcEEEecCCCCCCCcCCchhHHHHHHHHH
Q 020064 246 LNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPE--ADFKVVADAGHSANEPGIAAELVATNEKL 323 (331)
Q Consensus 246 ~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~~~~~~~~~~~i~~f 323 (331)
.......+.++ ++|+|+++|++|.++|.+.++.+.+.+++ +++++++++||++..++.++++.+.|.+|
T Consensus 195 --------~~~~~~~~~~~-~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~f 265 (270)
T 3llc_A 195 --------ANRVMAGMIDT-GCPVHILQGMADPDVPYQHALKLVEHLPADDVVLTLVRDGDHRLSRPQDIDRMRNAIRAM 265 (270)
T ss_dssp --------HTCCTTSCCCC-CSCEEEEEETTCSSSCHHHHHHHHHTSCSSSEEEEEETTCCSSCCSHHHHHHHHHHHHHH
T ss_pred --------hhhhhhhhhcC-CCCEEEEecCCCCCCCHHHHHHHHHhcCCCCeeEEEeCCCcccccccccHHHHHHHHHHH
Confidence 11123456788 59999999999999999999999999987 89999999999766544599999999999
Q ss_pred HHh
Q 020064 324 KNL 326 (331)
Q Consensus 324 l~~ 326 (331)
+++
T Consensus 266 l~~ 268 (270)
T 3llc_A 266 IEP 268 (270)
T ss_dssp HC-
T ss_pred hcC
Confidence 975
|
| >3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-32 Score=219.91 Aligned_cols=269 Identities=14% Similarity=0.120 Sum_probs=169.7
Q ss_pred CCCCCccc-eeEeCCCceEEEEeCCCCC--CCcEEEeccCCCCCC-CCCcccccCCCCcEEEEecCCCCCCCCCCCCCCc
Q 020064 18 YVEPYSTG-ILKVSDIHTIYWEQSGNPT--GHPVVFLHGGPGGGT-TPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQ 93 (331)
Q Consensus 18 ~~~~~~~~-~~~~~~g~~l~~~~~g~~~--~~~vl~~HG~~~~~~-~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~ 93 (331)
...+++.. ++...+|.+++|..+++.+ .|+||++||++++.. |..++..+.++||+|+++|+||||.|..... ..
T Consensus 12 ~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-~~ 90 (303)
T 3pe6_A 12 QSIPYQDLPHLVNADGQYLFCRYWAPTGTPKALIFVSHGAGEHSGRYEELARMLMGLDLLVFAHDHVGHGQSEGERM-VV 90 (303)
T ss_dssp TSCBGGGSCEEECTTSCEEEEEEECCSSCCSEEEEEECCTTCCGGGGHHHHHHHHHTTEEEEEECCTTSTTSCSSTT-CC
T ss_pred CCcccCCCCeEecCCCeEEEEEEeccCCCCCeEEEEECCCCchhhHHHHHHHHHHhCCCcEEEeCCCCCCCCCCCCC-CC
Confidence 34455554 7888899899998876533 467999999776644 4456666666799999999999999986542 34
Q ss_pred cchHHHHHHHHHHHHHhCC----CcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhh
Q 020064 94 NTTWDLIDDIEKLRQHLEI----PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDA 169 (331)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~----~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (331)
.+++++++|+.++++.+.. ++++++|||+||.+++.+|.++|++++++|++++............... ....
T Consensus 91 ~~~~~~~~d~~~~l~~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~----~~~~ 166 (303)
T 3pe6_A 91 SDFHVFVRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESATTFKVL----AAKV 166 (303)
T ss_dssp SSTHHHHHHHHHHHHHHHHHSTTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCSSSBCHHHHHHHHHH----HHHH
T ss_pred CCHHHHHHHHHHHHHHHhhccCCceEEEEEeCHHHHHHHHHHHhCcccccEEEEECccccCchhccHHHHHH----HHHH
Confidence 6788889999888887643 4899999999999999999999999999999998765432211110000 0000
Q ss_pred HHhhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccC
Q 020064 170 WESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKG 249 (331)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (331)
.......... . ............. ...+. . .+..........+.......
T Consensus 167 ~~~~~~~~~~---~----~~~~~~~~~~~~~----~~~~~------~----~~~~~~~~~~~~~~~~~~~~--------- 216 (303)
T 3pe6_A 167 LNSVLPNLSS---G----PIDSSVLSRNKTE----VDIYN------S----DPLICRAGLKVCFGIQLLNA--------- 216 (303)
T ss_dssp HHTTCCSCCC---C----CCCGGGTCSCHHH----HHHHH------T----CTTSCCSCCCHHHHHHHHHH---------
T ss_pred HHHhcccccC---C----ccchhhhhcchhH----HHHhc------c----CccccccchhhhhHHHHHHH---------
Confidence 0000000000 0 0000000000000 00000 0 00000000000000000000
Q ss_pred CCCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCC--CCcEEEecCCCCCCCcCCchhH---HHHHHHHHH
Q 020064 250 FFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWP--EADFKVVADAGHSANEPGIAAE---LVATNEKLK 324 (331)
Q Consensus 250 ~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~~~~~---~~~~i~~fl 324 (331)
..+....+.++ ++|+|+++|++|.+++.+.++.+.+.++ ++++++++++||+++.+. ++. +++.+.+|+
T Consensus 217 ----~~~~~~~~~~i-~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~-p~~~~~~~~~~~~~l 290 (303)
T 3pe6_A 217 ----VSRVERALPKL-TVPFLLLQGSADRLCDSKGAYLLMELAKSQDKTLKIYEGAYHVLHKEL-PEVTNSVFHEINMWV 290 (303)
T ss_dssp ----HHHHHHHGGGC-CSCEEEEEETTCSSBCHHHHHHHHHHCCCSSEEEEEETTCCSCGGGSC-HHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHhhcC-CCCEEEEeeCCCCCCChHHHHHHHHhcccCCceEEEeCCCccceeccc-hHHHHHHHHHHHHHH
Confidence 22344567888 5999999999999999999999999997 789999999999999886 764 444566666
Q ss_pred Hhh
Q 020064 325 NLI 327 (331)
Q Consensus 325 ~~~ 327 (331)
++.
T Consensus 291 ~~~ 293 (303)
T 3pe6_A 291 SQR 293 (303)
T ss_dssp HHT
T ss_pred hcc
Confidence 554
|
| >2vat_A Acetyl-COA--deacetylcephalosporin C acetyltransferase; A/B- hydrolase fold, acyltransferase, acetyl coenzyme A, antibiotic biosynthesis; HET: COA; 2.2A {Acremonium chrysogenum} SCOP: c.69.1.40 PDB: 2vav_A* 2vax_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-32 Score=231.21 Aligned_cols=282 Identities=13% Similarity=0.136 Sum_probs=169.3
Q ss_pred CCceEEEEeCCCC---CCCcEEEeccCCCCCCC---C-Cccc---ccCCCCcEEEEecCCC--CCCCCCCC---C-----
Q 020064 31 DIHTIYWEQSGNP---TGHPVVFLHGGPGGGTT---P-SNRR---FFDPDFYRIILFDQRG--AGKSTPHA---C----- 90 (331)
Q Consensus 31 ~g~~l~~~~~g~~---~~~~vl~~HG~~~~~~~---~-~~~~---~~~~~g~~vi~~D~~G--~G~s~~~~---~----- 90 (331)
+|.+++|...|+. .+|+|||+||++++... | .++. .+.++||+|+++|+|| +|.|.... .
T Consensus 92 ~g~~l~y~~~G~~~~~~~p~vvllHG~~~~~~~~~~w~~~~~~~~~L~~~~~~Vi~~D~~G~~~G~S~~~~~~~~~~~~~ 171 (444)
T 2vat_A 92 RDVPVAYKSWGRMNVSRDNCVIVCHTLTSSAHVTSWWPTLFGQGRAFDTSRYFIICLNYLGSPFGSAGPCSPDPDAEGQR 171 (444)
T ss_dssp EEEEEEEEEESCCCTTSCCEEEEECCTTCCSCGGGTCGGGBSTTSSBCTTTCEEEEECCTTCSSSSSSTTSBCTTTC--C
T ss_pred cceeEEEEEecCCCCCCCCeEEEECCCCcccchhhHHHHhcCccchhhccCCEEEEecCCCCCCCCCCCCCCCccccccc
Confidence 3447899999863 36899999997776543 4 3443 4657899999999999 68886421 0
Q ss_pred -----CCccchHHHHHHHHHHHHHhCCCc-EEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhc---c
Q 020064 91 -----LDQNTTWDLIDDIEKLRQHLEIPE-WQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEG---G 161 (331)
Q Consensus 91 -----~~~~~~~~~~~~~~~~~~~~~~~~-v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~---~ 161 (331)
...++++++++|+.++++.++.++ ++++||||||.+++.+|.++|++|+++|++++..........+... .
T Consensus 172 ~~~~~f~~~t~~~~a~dl~~ll~~l~~~~~~~lvGhSmGG~ial~~A~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~ 251 (444)
T 2vat_A 172 PYGAKFPRTTIRDDVRIHRQVLDRLGVRQIAAVVGASMGGMHTLEWAFFGPEYVRKIVPIATSCRQSGWCAAWFETQRQC 251 (444)
T ss_dssp BCGGGCCCCCHHHHHHHHHHHHHHHTCCCEEEEEEETHHHHHHHHHGGGCTTTBCCEEEESCCSBCCHHHHHHHHHHHHH
T ss_pred ccccccccccHHHHHHHHHHHHHhcCCccceEEEEECHHHHHHHHHHHhChHhhheEEEEeccccCCccchhHHHHHHHH
Confidence 013689999999999999999999 9999999999999999999999999999999876542211000000 0
Q ss_pred c--ccCC----------hh---hHHhhhccCCcchhhhhHHhhccccCC-C-ch-------------------H--HHHH
Q 020064 162 A--AAIY----------PD---AWESFRDLIPENERSCFVDAYSKRLNS-D-DK-------------------E--TQYA 203 (331)
Q Consensus 162 ~--~~~~----------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~-------------------~--~~~~ 203 (331)
. ...+ +. ....+...+.......+...+...... . .. . ....
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (444)
T 2vat_A 252 IYDDPKYLDGEYDVDDQPVRGLETARKIANLTYKSKPAMDERFHMAPGVQAGRNISSQDAKKEINGTDSGNSHRAGQPIE 331 (444)
T ss_dssp HHHSTTSGGGTCCTTSCCHHHHHHHHHHHHHHTSCHHHHHHHSCCCCCCC---------------------------CGG
T ss_pred HhcCCccccccccccCCcccchhHHHhhhhccccChHHHHHHhccCccccccccccccccccccccccccccccccCchh
Confidence 0 0000 00 000000000000001111111111110 0 00 0 0000
Q ss_pred HHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCC-CcchhhhhccccccccEEEEecCCCCccCC
Q 020064 204 AARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFP-SDSFLLDNIDNIRHINATIVQGRYDVCCPM 282 (331)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~ 282 (331)
....+.... ............+......+.. ..... ...+..+.+.++ ++|+|+|+|++|.++|+
T Consensus 332 ~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~-----~d~~~~~~~~~~~~l~~i-~~PvLvi~G~~D~~~p~ 397 (444)
T 2vat_A 332 AVSSYLRYQ--------AQKFAASFDANCYIAMTLKFDT-----HDISRGRAGSIPEALAMI-TQPALIICARSDGLYSF 397 (444)
T ss_dssp GHHHHHHHH--------HHHHHHSSCHHHHHHHHHHHHT-----CBTTTTTCSSHHHHHTTC-CSCEEEEECTTCSSSCH
T ss_pred hHHHHHHHH--------HHHHhhccCccHHHHHHHHhhh-----hhccccccccHHHHhhcC-CCCEEEEEeCCCCCCCH
Confidence 000000000 0000011111111111111100 00000 011256678899 59999999999999999
Q ss_pred cchHHHHHhCCCCcEEEec-CCCCCCCcCCchhHHHHHHHHHHHhh
Q 020064 283 MSAWDLHKAWPEADFKVVA-DAGHSANEPGIAAELVATNEKLKNLI 327 (331)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~-~~gH~~~~~~~~~~~~~~i~~fl~~~ 327 (331)
+.++.+.+.++++++++++ ++||+++.++ ++++.+.|.+||++.
T Consensus 398 ~~~~~l~~~~p~~~~~~i~~~~GH~~~~e~-p~~~~~~i~~fL~~~ 442 (444)
T 2vat_A 398 DEHVEMGRSIPNSRLCVVDTNEGHDFFVME-ADKVNDAVRGFLDQS 442 (444)
T ss_dssp HHHHHHHHHSTTEEEEECCCSCGGGHHHHT-HHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHCCCcEEEEeCCCCCcchHHhC-HHHHHHHHHHHHHHh
Confidence 9999999999999999999 9999999997 999999999999764
|
| >3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-36 Score=239.90 Aligned_cols=276 Identities=14% Similarity=0.107 Sum_probs=168.9
Q ss_pred CccceeEeCCCceEEEEeCCCCCCCcEEEeccCCCCCCC-CCcccccCCCCcEEEEecCCCCCCCCCCCC---CCccchH
Q 020064 22 YSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTT-PSNRRFFDPDFYRIILFDQRGAGKSTPHAC---LDQNTTW 97 (331)
Q Consensus 22 ~~~~~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~~-~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~---~~~~~~~ 97 (331)
++.+++++ +|.+++|...| ++|+|||+||++++... ..++..+ .+||+|+++|+||||.|..+.. ...++.+
T Consensus 5 ~~~~~~~~-~g~~~~~~~~g--~~p~vv~lHG~~~~~~~~~~~~~~l-~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~ 80 (304)
T 3b12_A 5 FERRLVDV-GDVTINCVVGG--SGPALLLLHGFPQNLHMWARVAPLL-ANEYTVVCADLRGYGGSSKPVGAPDHANYSFR 80 (304)
Confidence 45566776 55599999988 68999999997766444 4455555 4899999999999999987631 2467899
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccC
Q 020064 98 DLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLI 177 (331)
Q Consensus 98 ~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (331)
++++|+.++++.++.++++++||||||.+++.+|.++|++|+++|+++++............. ....+.......
T Consensus 81 ~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 155 (304)
T 3b12_A 81 AMASDQRELMRTLGFERFHLVGHARGGRTGHRMALDHPDSVLSLAVLDIIPTYVMFEEVDRFV-----ARAYWHWYFLQQ 155 (304)
Confidence 999999999999999999999999999999999999999999999999875432211000000 000000000000
Q ss_pred C--------cchhhhhHHh-hccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhcc
Q 020064 178 P--------ENERSCFVDA-YSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNK 248 (331)
Q Consensus 178 ~--------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (331)
+ ......+... +...+..... ...++.....................+...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (304)
T 3b12_A 156 PAPYPEKVIGADPDTFYEGCLFGWGATGAD--------------------GFDPEQLEEYRKQWRDPAAIHGSCCDYRAG 215 (304)
Confidence 0 0000000000 0000000000 000000000000000000000000000000
Q ss_pred CCCCCcchhhhhccccccccEEEEecCCCCc-cCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhh
Q 020064 249 GFFPSDSFLLDNIDNIRHINATIVQGRYDVC-CPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNLI 327 (331)
Q Consensus 249 ~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~-~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 327 (331)
............+.++ ++|+|+|+|++|.. .+....+.+.+..++++++++ ++||+++.++ |+++.+.|.+||++.
T Consensus 216 ~~~~~~~~~~~~~~~i-~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i-~~gH~~~~e~-p~~~~~~i~~fl~~~ 292 (304)
T 3b12_A 216 GTIDFELDHGDLGRQV-QCPALVFSGSAGLMHSLFEMQVVWAPRLANMRFASL-PGGHFFVDRF-PDDTARILREFLSDA 292 (304)
Confidence 0000011111227788 69999999999954 466777778888899999999 9999999997 999999999999887
Q ss_pred hc
Q 020064 328 KN 329 (331)
Q Consensus 328 ~~ 329 (331)
..
T Consensus 293 ~~ 294 (304)
T 3b12_A 293 RS 294 (304)
Confidence 54
|
| >2b61_A Homoserine O-acetyltransferase; acyl-enzyme, aspartate pathway, coenzyme A, structure-functi studies, alpha-beta hydrolase fold; 1.65A {Haemophilus influenzae} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-32 Score=226.74 Aligned_cols=281 Identities=15% Similarity=0.141 Sum_probs=168.5
Q ss_pred CCceEEEEeCCCCC---CCcEEEeccCCCCCCC---------CC-ccc---ccCCCCcEEEEecCCC-CCCCCCCCC---
Q 020064 31 DIHTIYWEQSGNPT---GHPVVFLHGGPGGGTT---------PS-NRR---FFDPDFYRIILFDQRG-AGKSTPHAC--- 90 (331)
Q Consensus 31 ~g~~l~~~~~g~~~---~~~vl~~HG~~~~~~~---------~~-~~~---~~~~~g~~vi~~D~~G-~G~s~~~~~--- 90 (331)
+|.+++|...|+++ +|+|||+||++++... |. ++. .+.++||+|+++|+|| +|.|..+..
T Consensus 42 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~~g~s~~~~~~~~ 121 (377)
T 2b61_A 42 SYINVAYQTYGTLNDEKNNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDTDRYFFISSNVLGGCKGTTGPSSINP 121 (377)
T ss_dssp CSEEEEEEEESCCCTTCCCEEEEECCTTCCSCSCCSSSCCCTTGGGEETTSSEETTTCEEEEECCTTCSSSSSCTTSBCT
T ss_pred cceeEEEEecccccccCCCeEEEeCCCCCccccccccccchhhhhccCcccccccCCceEEEecCCCCCCCCCCCcccCc
Confidence 45589999998654 7899999997766443 44 443 2547899999999999 688875421
Q ss_pred ---------CCccchHHHHHHHHHHHHHhCCCcEE-EEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhh-
Q 020064 91 ---------LDQNTTWDLIDDIEKLRQHLEIPEWQ-VFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYE- 159 (331)
Q Consensus 91 ---------~~~~~~~~~~~~~~~~~~~~~~~~v~-lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~- 159 (331)
...++++++++|+.++++.++.++++ |+||||||.+++.+|.++|++|+++|++++..........+..
T Consensus 122 ~~g~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 201 (377)
T 2b61_A 122 QTGKPYGSQFPNIVVQDIVKVQKALLEHLGISHLKAIIGGSFGGMQANQWAIDYPDFMDNIVNLCSSIYFSAEAIGFNHV 201 (377)
T ss_dssp TTSSBCGGGCCCCCHHHHHHHHHHHHHHTTCCCEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSSCCHHHHHHHHH
T ss_pred cccccccccCCcccHHHHHHHHHHHHHHcCCcceeEEEEEChhHHHHHHHHHHCchhhheeEEeccCccccccchhHHHH
Confidence 01478999999999999999999998 9999999999999999999999999999987543211100000
Q ss_pred --ccc--ccCCh----------h-hH--HhhhccCCcchhhhhHHhhccccCCCchH-HHHHHHHHhhhHHHhhhcCCCC
Q 020064 160 --GGA--AAIYP----------D-AW--ESFRDLIPENERSCFVDAYSKRLNSDDKE-TQYAAARAWTKWEMMTAHLLPN 221 (331)
Q Consensus 160 --~~~--~~~~~----------~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 221 (331)
... ...+. . .. ..............+...+.......... ........+......
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 274 (377)
T 2b61_A 202 MRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKAFGRATKSDGSFWGDYFQVESYLSYQGK------- 274 (377)
T ss_dssp HHHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHHHTTTCBCTTCCTTSCCBHHHHHHHHHHH-------
T ss_pred HHHHHhcCccccccchhccCCCchhhhHHHHhhhhcccCHHHHHHHhccccccccccccchHHHHHHHHhhhh-------
Confidence 000 00000 0 00 00000000000000001111110000000 000000000000000
Q ss_pred hhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCCCccCC----cchHHHHHhCCCCcE
Q 020064 222 EENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPM----MSAWDLHKAWPEADF 297 (331)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~----~~~~~~~~~~~~~~~ 297 (331)
..........+...+..... ........+....+.++ ++|+|+|+|++|.++|+ +.++.+.+.++++++
T Consensus 275 -~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~i-~~Pvlii~G~~D~~~~~~~~~~~~~~l~~~~~~~~~ 347 (377)
T 2b61_A 275 -KFLERFDANSYLHLLRALDM-----YDPSLGYENVKEALSRI-KARYTLVSVTTDQLFKPIDLYKSKQLLEQSGVDLHF 347 (377)
T ss_dssp -HHHTTCCHHHHHHHHHHHHH-----CCTTTTSSCHHHHHTTC-CSEEEEEEETTCSSSCHHHHHHHHHHHHHTTCEEEE
T ss_pred -hhccccChhHHHHHHHHHhc-----cccccccchHHhhhhhc-CCCEEEEecCCcccCCccchHHHHHHHHhcCCCceE
Confidence 00000111111111111100 00000022345678889 59999999999999999 888999999999999
Q ss_pred EEec-CCCCCCCcCCchhHHHHHHHHHHHh
Q 020064 298 KVVA-DAGHSANEPGIAAELVATNEKLKNL 326 (331)
Q Consensus 298 ~~~~-~~gH~~~~~~~~~~~~~~i~~fl~~ 326 (331)
++++ ++||+++.++ ++++.+.|.+||++
T Consensus 348 ~~i~~~~gH~~~~e~-p~~~~~~i~~fl~~ 376 (377)
T 2b61_A 348 YEFPSDYGHDAFLVD-YDQFEKRIRDGLAG 376 (377)
T ss_dssp EEECCTTGGGHHHHC-HHHHHHHHHHHHHT
T ss_pred EEeCCCCCchhhhcC-HHHHHHHHHHHHhc
Confidence 9999 9999999987 99999999999975
|
| >3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-33 Score=221.38 Aligned_cols=239 Identities=13% Similarity=0.097 Sum_probs=168.1
Q ss_pred CCccceeEeCCCceEEEEeCCCC--CCCcEEEeccCCCCC--C-CCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccc
Q 020064 21 PYSTGILKVSDIHTIYWEQSGNP--TGHPVVFLHGGPGGG--T-TPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNT 95 (331)
Q Consensus 21 ~~~~~~~~~~~g~~l~~~~~g~~--~~~~vl~~HG~~~~~--~-~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~ 95 (331)
..+..+++. +|.+++|...++. +.|+||++||++++. . +..++..+.+.||.|+++|+||+|.|.... ..++
T Consensus 21 ~~~~~~~~~-~g~~l~~~~~~p~~~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~--~~~~ 97 (270)
T 3pfb_A 21 GMATITLER-DGLQLVGTREEPFGEIYDMAIIFHGFTANRNTSLLREIANSLRDENIASVRFDFNGHGDSDGKF--ENMT 97 (270)
T ss_dssp EEEEEEEEE-TTEEEEEEEEECSSSSEEEEEEECCTTCCTTCHHHHHHHHHHHHTTCEEEEECCTTSTTSSSCG--GGCC
T ss_pred cceEEEecc-CCEEEEEEEEcCCCCCCCEEEEEcCCCCCccccHHHHHHHHHHhCCcEEEEEccccccCCCCCC--CccC
Confidence 344455554 6669999888753 356899999977653 2 345566676789999999999999998754 4678
Q ss_pred hHHHHHHHHHHHHHh----CCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHH
Q 020064 96 TWDLIDDIEKLRQHL----EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWE 171 (331)
Q Consensus 96 ~~~~~~~~~~~~~~~----~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (331)
+.++++|+.++++.+ +.++++++|||+||.+++.+|..+|++++++|++++............... ....+.
T Consensus 98 ~~~~~~d~~~~i~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~-~~~~~~--- 173 (270)
T 3pfb_A 98 VLNEIEDANAILNYVKTDPHVRNIYLVGHAQGGVVASMLAGLYPDLIKKVVLLAPAATLKGDALEGNTQG-VTYNPD--- 173 (270)
T ss_dssp HHHHHHHHHHHHHHHHTCTTEEEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCTHHHHHHHHTEETT-EECCTT---
T ss_pred HHHHHHhHHHHHHHHHhCcCCCeEEEEEeCchhHHHHHHHHhCchhhcEEEEeccccccchhhhhhhhhc-cccCcc---
Confidence 899999999999988 667999999999999999999999999999999998765432110000000 000000
Q ss_pred hhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCC
Q 020064 172 SFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFF 251 (331)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (331)
.... .... ........+.....
T Consensus 174 ----~~~~---------~~~~--------------------------------~~~~~~~~~~~~~~------------- 195 (270)
T 3pfb_A 174 ----HIPD---------RLPF--------------------------------KDLTLGGFYLRIAQ------------- 195 (270)
T ss_dssp ----SCCS---------EEEE--------------------------------TTEEEEHHHHHHHH-------------
T ss_pred ----cccc---------cccc--------------------------------cccccchhHhhccc-------------
Confidence 0000 0000 00000000000000
Q ss_pred CCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhhh
Q 020064 252 PSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNLIK 328 (331)
Q Consensus 252 ~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~ 328 (331)
..+....+.++ ++|+|+++|++|.++|++.++.+.+.++++++++++++||.++.+. ++++.+.|.+||++..
T Consensus 196 --~~~~~~~~~~~-~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~-~~~~~~~i~~fl~~~~ 268 (270)
T 3pfb_A 196 --QLPIYEVSAQF-TKPVCLIHGTDDTVVSPNASKKYDQIYQNSTLHLIEGADHCFSDSY-QKNAVNLTTDFLQNNN 268 (270)
T ss_dssp --HCCHHHHHTTC-CSCEEEEEETTCSSSCTHHHHHHHHHCSSEEEEEETTCCTTCCTHH-HHHHHHHHHHHHC---
T ss_pred --ccCHHHHHhhC-CccEEEEEcCCCCCCCHHHHHHHHHhCCCCeEEEcCCCCcccCccc-hHHHHHHHHHHHhhcC
Confidence 22344567788 5999999999999999999999999999999999999999998775 9999999999998653
|
| >3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-32 Score=205.55 Aligned_cols=195 Identities=14% Similarity=0.189 Sum_probs=163.4
Q ss_pred CCccceeEeCCCceEE---EEeCCCCCCCcEEEeccCCCCCC-CCC--cccccCCCCcEEEEecCCCCCCC---CCCCCC
Q 020064 21 PYSTGILKVSDIHTIY---WEQSGNPTGHPVVFLHGGPGGGT-TPS--NRRFFDPDFYRIILFDQRGAGKS---TPHACL 91 (331)
Q Consensus 21 ~~~~~~~~~~~g~~l~---~~~~g~~~~~~vl~~HG~~~~~~-~~~--~~~~~~~~g~~vi~~D~~G~G~s---~~~~~~ 91 (331)
..++.+++. +|.+++ |...| ++|+||++||++++.. +.. ....+.++||.|+++|+||+|.| ....
T Consensus 3 ~~~~~~~~~-~g~~l~~~~~~~~~--~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~-- 77 (207)
T 3bdi_A 3 ALQEEFIDV-NGTRVFQRKMVTDS--NRRSIALFHGYSFTSMDWDKADLFNNYSKIGYNVYAPDYPGFGRSASSEKYG-- 77 (207)
T ss_dssp CCEEEEEEE-TTEEEEEEEECCTT--CCEEEEEECCTTCCGGGGGGGTHHHHHHTTTEEEEEECCTTSTTSCCCTTTC--
T ss_pred cceeEEEee-CCcEEEEEEEeccC--CCCeEEEECCCCCCccccchHHHHHHHHhCCCeEEEEcCCcccccCcccCCC--
Confidence 345666766 555999 77766 6789999999776644 455 66777788999999999999999 6544
Q ss_pred Ccc-chHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhH
Q 020064 92 DQN-TTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAW 170 (331)
Q Consensus 92 ~~~-~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (331)
..+ +.+++++++..+++.++.++++++|||+||.+++.++.++|++++++|++++.....
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~------------------- 138 (207)
T 3bdi_A 78 IDRGDLKHAAEFIRDYLKANGVARSVIMGASMGGGMVIMTTLQYPDIVDGIIAVAPAWVES------------------- 138 (207)
T ss_dssp CTTCCHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCGG-------------------
T ss_pred CCcchHHHHHHHHHHHHHHcCCCceEEEEECccHHHHHHHHHhCchhheEEEEeCCccccc-------------------
Confidence 345 899999999999999999999999999999999999999999999999999853210
Q ss_pred HhhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCC
Q 020064 171 ESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGF 250 (331)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (331)
T Consensus 139 -------------------------------------------------------------------------------- 138 (207)
T 3bdi_A 139 -------------------------------------------------------------------------------- 138 (207)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhh
Q 020064 251 FPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNLI 327 (331)
Q Consensus 251 ~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 327 (331)
....+.++ ++|+++++|++|.+++++..+.+.+.++++++++++++||..+.+. ++++.+.|.+|++++
T Consensus 139 ------~~~~~~~~-~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~-~~~~~~~i~~fl~~~ 207 (207)
T 3bdi_A 139 ------LKGDMKKI-RQKTLLVWGSKDHVVPIALSKEYASIISGSRLEIVEGSGHPVYIEK-PEEFVRITVDFLRNL 207 (207)
T ss_dssp ------GHHHHTTC-CSCEEEEEETTCTTTTHHHHHHHHHHSTTCEEEEETTCCSCHHHHS-HHHHHHHHHHHHHTC
T ss_pred ------hhHHHhhc-cCCEEEEEECCCCccchHHHHHHHHhcCCceEEEeCCCCCCccccC-HHHHHHHHHHHHhhC
Confidence 01134456 5999999999999999999999999999999999999999998886 999999999999863
|
| >3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-32 Score=219.84 Aligned_cols=269 Identities=13% Similarity=0.110 Sum_probs=170.3
Q ss_pred CCCCCccc-eeEeCCCceEEEEeCCCC--CCCcEEEeccCCCCCC-CCCcccccCCCCcEEEEecCCCCCCCCCCCCCCc
Q 020064 18 YVEPYSTG-ILKVSDIHTIYWEQSGNP--TGHPVVFLHGGPGGGT-TPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQ 93 (331)
Q Consensus 18 ~~~~~~~~-~~~~~~g~~l~~~~~g~~--~~~~vl~~HG~~~~~~-~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~ 93 (331)
...++++. ++...+|.+++|..+++. ..|+|||+||++++.. |..++..+.++||+|+++|+||+|.|..... ..
T Consensus 30 ~~~~~~~~~~~~~~dg~~l~~~~~~p~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~-~~ 108 (342)
T 3hju_A 30 QSIPYQDLPHLVNADGQYLFCRYWKPTGTPKALIFVSHGAGEHSGRYEELARMLMGLDLLVFAHDHVGHGQSEGERM-VV 108 (342)
T ss_dssp TSCBTTSSCEEECTTSCEEEEEEECCSSCCSEEEEEECCTTCCGGGGHHHHHHHHTTTEEEEEECCTTSTTSCSSTT-CC
T ss_pred CCcccccCceEEccCCeEEEEEEeCCCCCCCcEEEEECCCCcccchHHHHHHHHHhCCCeEEEEcCCCCcCCCCcCC-Cc
Confidence 34556665 888889999999887643 3457999999776644 4556667777799999999999999986542 35
Q ss_pred cchHHHHHHHHHHHHHhCC----CcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhh
Q 020064 94 NTTWDLIDDIEKLRQHLEI----PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDA 169 (331)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~----~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (331)
.+++++++|+.++++.+.. ++++|+|||+||.+++.+|.++|++++++|++++............... ....
T Consensus 109 ~~~~~~~~d~~~~l~~l~~~~~~~~v~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~----~~~~ 184 (342)
T 3hju_A 109 SDFHVFVRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESATTFKVL----AAKV 184 (342)
T ss_dssp SCTHHHHHHHHHHHHHHHHHSTTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCSCCTTTTSHHHHH----HHHH
T ss_pred CcHHHHHHHHHHHHHHHHHhCCCCcEEEEEeChHHHHHHHHHHhCccccceEEEECcccccchhhhhHHHHH----HHHH
Confidence 6788889999888887653 4899999999999999999999999999999998765422111000000 0000
Q ss_pred HHhhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccC
Q 020064 170 WESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKG 249 (331)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (331)
+..+...... ......+....... ...+. . .+..........+.......
T Consensus 185 ~~~~~~~~~~-------~~~~~~~~~~~~~~----~~~~~------~----~~~~~~~~~~~~~~~~~~~~--------- 234 (342)
T 3hju_A 185 LNLVLPNLSL-------GPIDSSVLSRNKTE----VDIYN------S----DPLICRAGLKVCFGIQLLNA--------- 234 (342)
T ss_dssp HHHHCTTCBC-------CCCCGGGSCSCHHH----HHHHH------T----CTTCCCSCCBHHHHHHHHHH---------
T ss_pred HHHhcccccc-------CcccccccccchHH----HHHHh------c----CcccccccccHHHHHHHHHH---------
Confidence 0000000000 00000000000000 00000 0 00000000000000000000
Q ss_pred CCCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCC--CCcEEEecCCCCCCCcCCchhH---HHHHHHHHH
Q 020064 250 FFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWP--EADFKVVADAGHSANEPGIAAE---LVATNEKLK 324 (331)
Q Consensus 250 ~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~~~~~---~~~~i~~fl 324 (331)
..+....+.++ ++|+|+|+|++|.+++++.++.+.+.++ ++++++++++||+++.+. +++ +++.+.+||
T Consensus 235 ----~~~~~~~~~~i-~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~-~~~~~~~~~~~~~~l 308 (342)
T 3hju_A 235 ----VSRVERALPKL-TVPFLLLQGSADRLCDSKGAYLLMELAKSQDKTLKIYEGAYHVLHKEL-PEVTNSVFHEINMWV 308 (342)
T ss_dssp ----HHHHHHHGGGC-CSCEEEEEETTCSSSCHHHHHHHHHHCCCSSEEEEEETTCCSCGGGSC-HHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHhC-CcCEEEEEeCCCcccChHHHHHHHHHcCCCCceEEEECCCCchhhcCC-hHHHHHHHHHHHHHH
Confidence 22344577888 5999999999999999999999999997 789999999999999886 664 445566666
Q ss_pred Hhh
Q 020064 325 NLI 327 (331)
Q Consensus 325 ~~~ 327 (331)
++.
T Consensus 309 ~~~ 311 (342)
T 3hju_A 309 SQR 311 (342)
T ss_dssp HHH
T ss_pred hcc
Confidence 553
|
| >1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-32 Score=215.83 Aligned_cols=245 Identities=15% Similarity=0.172 Sum_probs=144.1
Q ss_pred eCCCCCC--CcEEEeccCCCCCCC-CCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCc-
Q 020064 39 QSGNPTG--HPVVFLHGGPGGGTT-PSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPE- 114 (331)
Q Consensus 39 ~~g~~~~--~~vl~~HG~~~~~~~-~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 114 (331)
.+|++++ |+|||+||++++... ..++..+.+.+|+|+++|+||||.|.... .++++++++|+.++++.++.++
T Consensus 8 ~~g~~~~~~~~vvllHG~~~~~~~w~~~~~~L~~~~~~vi~~Dl~GhG~S~~~~---~~~~~~~a~~l~~~l~~l~~~~~ 84 (264)
T 1r3d_A 8 HFAKPTARTPLVVLVHGLLGSGADWQPVLSHLARTQCAALTLDLPGHGTNPERH---CDNFAEAVEMIEQTVQAHVTSEV 84 (264)
T ss_dssp ESSCCBTTBCEEEEECCTTCCGGGGHHHHHHHTTSSCEEEEECCTTCSSCC----------CHHHHHHHHHHHTTCCTTS
T ss_pred ccCCCCCCCCcEEEEcCCCCCHHHHHHHHHHhcccCceEEEecCCCCCCCCCCC---ccCHHHHHHHHHHHHHHhCcCCC
Confidence 4555443 889999998776554 44555554489999999999999998643 3678999999999999999876
Q ss_pred -EEEEEeChhHHHHHH---HHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhc
Q 020064 115 -WQVFGGSWGSTLALA---YSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYS 190 (331)
Q Consensus 115 -v~lvG~S~Gg~~a~~---~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (331)
++|+||||||.+++. +|.++|++++++|++++............... ....|........ .......+.
T Consensus 85 p~~lvGhSmGG~va~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~---~~~~~~~~~ 157 (264)
T 1r3d_A 85 PVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQENEEKAARWQ----HDQQWAQRFSQQP---IEHVLSDWY 157 (264)
T ss_dssp EEEEEEETHHHHHHHHHHHHTTTTTSEEEEEEEESCCCCCCSHHHHHHHHH----HHHHHHHHHHHSC---HHHHHHHHT
T ss_pred ceEEEEECHhHHHHHHHHHHHhhCccccceEEEecCCCCCCChhhhhhhhc----ccHHHHHHhcccc---HHHHHHHHh
Confidence 999999999999999 88899999999999987543211100000000 0000110000000 011111111
Q ss_pred c-c-cCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhcccccccc
Q 020064 191 K-R-LNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHIN 268 (331)
Q Consensus 191 ~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P 268 (331)
. . +.......... +... . ...... .....+... .. ....+..+.+.++ ++|
T Consensus 158 ~~~~~~~~~~~~~~~----~~~~---~--~~~~~~--------~~~~~~~~~--------~~-~~~~~~~~~l~~i-~~P 210 (264)
T 1r3d_A 158 QQAVFSSLNHEQRQT----LIAQ---R--SANLGS--------SVAHMLLAT--------SL-AKQPYLLPALQAL-KLP 210 (264)
T ss_dssp TSGGGTTCCHHHHHH----HHHH---H--TTSCHH--------HHHHHHHHT--------CG-GGCCCCHHHHHTC-SSC
T ss_pred hhhhhhccCHHHHHH----HHHH---H--hhcchH--------HHHHHHHhh--------hh-ccCccHHHHHHhc-CCC
Confidence 1 0 11111111000 0000 0 000000 000000000 00 0012345567888 599
Q ss_pred EEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhh
Q 020064 269 ATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNLI 327 (331)
Q Consensus 269 ~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 327 (331)
+|+|+|++|..++ .+.+.++ .++++++++||+++.++ |+++++.|.+|++++
T Consensus 211 ~lii~G~~D~~~~-----~~~~~~~-~~~~~i~~~gH~~~~e~-p~~~~~~i~~fl~~~ 262 (264)
T 1r3d_A 211 IHYVCGEQDSKFQ-----QLAESSG-LSYSQVAQAGHNVHHEQ-PQAFAKIVQAMIHSI 262 (264)
T ss_dssp EEEEEETTCHHHH-----HHHHHHC-SEEEEETTCCSCHHHHC-HHHHHHHHHHHHHHH
T ss_pred EEEEEECCCchHH-----HHHHHhC-CcEEEcCCCCCchhhcC-HHHHHHHHHHHHHHh
Confidence 9999999998653 2333333 78999999999999997 999999999999875
|
| >1k8q_A Triacylglycerol lipase, gastric; APHA beta hydrolase fold, hydrolase; HET: NAG BOG C11; 2.70A {Canis lupus familiaris} SCOP: c.69.1.6 PDB: 1hlg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-32 Score=223.76 Aligned_cols=298 Identities=10% Similarity=0.012 Sum_probs=169.1
Q ss_pred CCCccceeEeCCCceEEEEeCCC--------CCCCcEEEeccCCCCCC-CCCccc------ccCCCCcEEEEecCCCCCC
Q 020064 20 EPYSTGILKVSDIHTIYWEQSGN--------PTGHPVVFLHGGPGGGT-TPSNRR------FFDPDFYRIILFDQRGAGK 84 (331)
Q Consensus 20 ~~~~~~~~~~~~g~~l~~~~~g~--------~~~~~vl~~HG~~~~~~-~~~~~~------~~~~~g~~vi~~D~~G~G~ 84 (331)
.+.+...+.+.||.+++|....+ .++|+||++||++++.. |..... .+.++||+|+++|+||||.
T Consensus 25 ~~~~~~~~~~~dG~~l~~~~~~~~~~~~~~~~~~~~vvl~HG~~~~~~~~~~~~~~~~~a~~l~~~G~~vi~~D~~G~G~ 104 (377)
T 1k8q_A 25 YPAEEYEVVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASATNWISNLPNNSLAFILADAGYDVWLGNSRGNTW 104 (377)
T ss_dssp CCCEEEEEECTTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTTCCGGGGSSSCTTTCHHHHHHHTTCEEEECCCTTSTT
T ss_pred CCceEEEeEcCCCCEEEEEEecCCCCCccccCCCCeEEEECCCCCchhhhhcCCCcccHHHHHHHCCCCEEEecCCCCCC
Confidence 45677889999998888876532 25789999999777654 333443 5666899999999999999
Q ss_pred CCCC-----CCC--CccchHHHHH-HHHHHHH----HhCCCcEEEEEeChhHHHHHHHHHhCCC---ceeeEEEeccccc
Q 020064 85 STPH-----ACL--DQNTTWDLID-DIEKLRQ----HLEIPEWQVFGGSWGSTLALAYSLAHPD---KVTGLVLRGIFLL 149 (331)
Q Consensus 85 s~~~-----~~~--~~~~~~~~~~-~~~~~~~----~~~~~~v~lvG~S~Gg~~a~~~a~~~p~---~v~~li~~~~~~~ 149 (331)
|... ... ..++++++++ |+.++++ .++.++++++||||||.+++.+|.++|+ +++++|++++...
T Consensus 105 S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~~~~v~~lvl~~~~~~ 184 (377)
T 1k8q_A 105 ARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKTGQDKLHYVGHSQGTTIGFIAFSTNPKLAKRIKTFYALAPVAT 184 (377)
T ss_dssp SCEESSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHHCHHHHTTEEEEEEESCCSC
T ss_pred CCCCCCCCCCcccccCccHHHHHhhhHHHHHHHHHHhcCcCceEEEEechhhHHHHHHHhcCchhhhhhhEEEEeCCchh
Confidence 9853 110 1568888888 7777554 5788899999999999999999999998 8999999998654
Q ss_pred hhhhhhhHhhcccccCChhhHHhhhc---cCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhh
Q 020064 150 RKKEIDWFYEGGAAAIYPDAWESFRD---LIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIK 226 (331)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (331)
........ + .........+..... ..+... ....+...+...... ......+..................
T Consensus 185 ~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (377)
T 1k8q_A 185 VKYTETLI-N-KLMLVPSFLFKLIFGNKIFYPHHF---FDQFLATEVCSRETV--DLLCSNALFIICGFDTMNLNMSRLD 257 (377)
T ss_dssp CSSCCSGG-G-GGGTSCHHHHHHHSCSSEESCCCH---HHHHHHHHTTTBTTT--HHHHHHHHHHHHCCCGGGSCGGGHH
T ss_pred cccchhHH-H-HHHhhccHHHHhhcCccccCcHHH---HHHHHHHHhhCCccH--HHHHHHHHHHhcCCCcccCCHHHHH
Confidence 32110000 0 000000000000000 000000 000000000000000 0000000000000000000000000
Q ss_pred c----CCccHHHHHH---hhh-hhhhhhccCC---------CCCcchhhhhccccccccEEEEecCCCCccCCcchHHHH
Q 020064 227 R----GEDDIFSLAF---ARI-ENHYFLNKGF---------FPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLH 289 (331)
Q Consensus 227 ~----~~~~~~~~~~---~~~-~~~~~~~~~~---------~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~ 289 (331)
. .........+ ... ....+....+ ..........+.++ ++|+|+|+|++|.++|++.++.+.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i-~~P~lii~G~~D~~~~~~~~~~~~ 336 (377)
T 1k8q_A 258 VYLSHNPAGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDM-HVPIAVWNGGNDLLADPHDVDLLL 336 (377)
T ss_dssp HHHTTCCCCEEHHHHHHHHHHHHHCSCBCCCCSSHHHHHHHHSSSSCCBCCGGGC-CSCEEEEEETTCSSSCHHHHHHHH
T ss_pred HHhccCCCCccHHHHHHHHHHHhcCCeeeccCCcchhhHHHcCCCCCcccCHhhC-CCCEEEEEeCCCcccCHHHHHHHH
Confidence 0 0000000000 000 0000000000 00000112347888 599999999999999999999999
Q ss_pred HhCCCCc-EEEecCCCCCCCc---CCchhHHHHHHHHHHHh
Q 020064 290 KAWPEAD-FKVVADAGHSANE---PGIAAELVATNEKLKNL 326 (331)
Q Consensus 290 ~~~~~~~-~~~~~~~gH~~~~---~~~~~~~~~~i~~fl~~ 326 (331)
+.+++.+ +++++++||+.+. +. ++++.+.|.+||++
T Consensus 337 ~~~~~~~~~~~~~~~gH~~~~~~~~~-~~~~~~~i~~fl~~ 376 (377)
T 1k8q_A 337 SKLPNLIYHRKIPPYNHLDFIWAMDA-PQAVYNEIVSMMGT 376 (377)
T ss_dssp TTCTTEEEEEEETTCCTTHHHHCTTH-HHHTHHHHHHHHHT
T ss_pred HhCcCcccEEecCCCCceEEEecCCc-HHHHHHHHHHHhcc
Confidence 9999987 9999999999985 54 99999999999975
|
| >3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P | Back alignment and structure |
|---|
Probab=99.98 E-value=1.1e-31 Score=216.23 Aligned_cols=120 Identities=19% Similarity=0.318 Sum_probs=96.6
Q ss_pred cceeEeCCC---ceEEEEeCCCCCCCcEEEeccCCCCCCCCC-cccccCCC--CcEEEEecCCCCCCCCCCCCCCccchH
Q 020064 24 TGILKVSDI---HTIYWEQSGNPTGHPVVFLHGGPGGGTTPS-NRRFFDPD--FYRIILFDQRGAGKSTPHACLDQNTTW 97 (331)
Q Consensus 24 ~~~~~~~~g---~~l~~~~~g~~~~~~vl~~HG~~~~~~~~~-~~~~~~~~--g~~vi~~D~~G~G~s~~~~~~~~~~~~ 97 (331)
...+.+.++ .+++|...|. ++|+|||+||++++...|. ++..+ .+ +|+||++|+||||.|+.... ..++++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~g~-~~p~lvllHG~~~~~~~w~~~~~~L-~~~~~~~via~Dl~GhG~S~~~~~-~~~~~~ 91 (316)
T 3c5v_A 15 MEDVEVENETGKDTFRVYKSGS-EGPVLLLLHGGGHSALSWAVFTAAI-ISRVQCRIVALDLRSHGETKVKNP-EDLSAE 91 (316)
T ss_dssp EEEEEEEETTEEEEEEEEEECS-SSCEEEEECCTTCCGGGGHHHHHHH-HTTBCCEEEEECCTTSTTCBCSCT-TCCCHH
T ss_pred cceEEecCCcceEEEEEEecCC-CCcEEEEECCCCcccccHHHHHHHH-hhcCCeEEEEecCCCCCCCCCCCc-cccCHH
Confidence 345666553 3788887774 5788999999877655444 44444 45 89999999999999986432 358999
Q ss_pred HHHHHHHHHHHHh--CC-CcEEEEEeChhHHHHHHHHHh--CCCceeeEEEeccc
Q 020064 98 DLIDDIEKLRQHL--EI-PEWQVFGGSWGSTLALAYSLA--HPDKVTGLVLRGIF 147 (331)
Q Consensus 98 ~~~~~~~~~~~~~--~~-~~v~lvG~S~Gg~~a~~~a~~--~p~~v~~li~~~~~ 147 (331)
++++|+.++++.+ +. ++++|+||||||.+++.+|.+ +|+ ++++|++++.
T Consensus 92 ~~a~dl~~~l~~l~~~~~~~~~lvGhSmGG~ia~~~A~~~~~p~-v~~lvl~~~~ 145 (316)
T 3c5v_A 92 TMAKDVGNVVEAMYGDLPPPIMLIGHSMGGAIAVHTASSNLVPS-LLGLCMIDVV 145 (316)
T ss_dssp HHHHHHHHHHHHHHTTCCCCEEEEEETHHHHHHHHHHHTTCCTT-EEEEEEESCC
T ss_pred HHHHHHHHHHHHHhccCCCCeEEEEECHHHHHHHHHHhhccCCC-cceEEEEccc
Confidence 9999999999999 66 789999999999999999996 576 9999999875
|
| >1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23 | Back alignment and structure |
|---|
Probab=99.98 E-value=4.6e-33 Score=211.23 Aligned_cols=196 Identities=19% Similarity=0.183 Sum_probs=160.2
Q ss_pred CCccceeEeCCCceEEEEeCCC---CCCCcEEEeccCCCCCCCCC---cccccCCCCcEEEEecCCCCCCCCCCCCCCcc
Q 020064 21 PYSTGILKVSDIHTIYWEQSGN---PTGHPVVFLHGGPGGGTTPS---NRRFFDPDFYRIILFDQRGAGKSTPHACLDQN 94 (331)
Q Consensus 21 ~~~~~~~~~~~g~~l~~~~~g~---~~~~~vl~~HG~~~~~~~~~---~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~ 94 (331)
+.+..+++. +|.+++|...++ +++|+||++||++++...+. ....+.++||+|+++|+||+|.|.... ...
T Consensus 6 ~~~~~~~~~-~g~~l~~~~~~p~~~~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~--~~~ 82 (210)
T 1imj_A 6 EQREGTIQV-QGQALFFREALPGSGQARFSVLLLHGIRFSSETWQNLGTLHRLAQAGYRAVAIDLPGLGHSKEAA--APA 82 (210)
T ss_dssp EECCCCEEE-TTEEECEEEEECSSSCCSCEEEECCCTTCCHHHHHHHTHHHHHHHTTCEEEEECCTTSGGGTTSC--CSS
T ss_pred ccccceEee-CCeEEEEEEeCCCCCCCCceEEEECCCCCccceeecchhHHHHHHCCCeEEEecCCCCCCCCCCC--Ccc
Confidence 345667777 566999988632 35788999999877655433 366677789999999999999998765 345
Q ss_pred chHHHH--HHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHh
Q 020064 95 TTWDLI--DDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWES 172 (331)
Q Consensus 95 ~~~~~~--~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (331)
++++.+ +++..+++.++.++++++|||+||.+++.++..+|++++++|++++.....
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~--------------------- 141 (210)
T 1imj_A 83 PIGELAPGSFLAAVVDALELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTDK--------------------- 141 (210)
T ss_dssp CTTSCCCTHHHHHHHHHHTCCSCEEEEEGGGHHHHHHHHTSTTCCCSEEEEESCSCGGG---------------------
T ss_pred hhhhcchHHHHHHHHHHhCCCCeEEEEECchHHHHHHHHHhCccccceEEEeCCCcccc---------------------
Confidence 566666 899999999999999999999999999999999999999999999854210
Q ss_pred hhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCC
Q 020064 173 FRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFP 252 (331)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (331)
T Consensus 142 -------------------------------------------------------------------------------- 141 (210)
T 1imj_A 142 -------------------------------------------------------------------------------- 141 (210)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhh
Q 020064 253 SDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNLI 327 (331)
Q Consensus 253 ~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 327 (331)
.....+.++ ++|+++++|++|. ++.+..+.+ +.++++++++++++||+++.+. ++++.+.|.+|++++
T Consensus 142 ---~~~~~~~~~-~~p~l~i~g~~D~-~~~~~~~~~-~~~~~~~~~~~~~~~H~~~~~~-~~~~~~~i~~fl~~~ 209 (210)
T 1imj_A 142 ---INAANYASV-KTPALIVYGDQDP-MGQTSFEHL-KQLPNHRVLIMKGAGHPCYLDK-PEEWHTGLLDFLQGL 209 (210)
T ss_dssp ---SCHHHHHTC-CSCEEEEEETTCH-HHHHHHHHH-TTSSSEEEEEETTCCTTHHHHC-HHHHHHHHHHHHHTC
T ss_pred ---ccchhhhhC-CCCEEEEEcCccc-CCHHHHHHH-hhCCCCCEEEecCCCcchhhcC-HHHHHHHHHHHHHhc
Confidence 001234456 5999999999999 999999999 8889999999999999998886 999999999999875
|
| >3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A | Back alignment and structure |
|---|
Probab=99.98 E-value=5.7e-32 Score=213.30 Aligned_cols=238 Identities=17% Similarity=0.130 Sum_probs=164.1
Q ss_pred eCCCceEEEEeCCCCCCCcEEEeccCCCCC-CCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHH
Q 020064 29 VSDIHTIYWEQSGNPTGHPVVFLHGGPGGG-TTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLR 107 (331)
Q Consensus 29 ~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~-~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~ 107 (331)
..+|..++|.. | ++|+||++||++++. .|..++..+.+.||+|+++|+||+|.|.... ..++++++++|+.+++
T Consensus 27 ~~~g~~~~~~~-g--~~~~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~--~~~~~~~~~~d~~~~i 101 (270)
T 3rm3_A 27 VLSGAEPFYAE-N--GPVGVLLVHGFTGTPHSMRPLAEAYAKAGYTVCLPRLKGHGTHYEDM--ERTTFHDWVASVEEGY 101 (270)
T ss_dssp CCTTCCCEEEC-C--SSEEEEEECCTTCCGGGTHHHHHHHHHTTCEEEECCCTTCSSCHHHH--HTCCHHHHHHHHHHHH
T ss_pred CCCCCcccccC-C--CCeEEEEECCCCCChhHHHHHHHHHHHCCCEEEEeCCCCCCCCcccc--ccCCHHHHHHHHHHHH
Confidence 34566888875 4 579999999976664 4555666676789999999999999997543 3568999999999999
Q ss_pred HHhC--CCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhh
Q 020064 108 QHLE--IPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCF 185 (331)
Q Consensus 108 ~~~~--~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (331)
+.+. .++++++|||+||.+++.+|..+|+ ++++|+++++.............. ..... ..
T Consensus 102 ~~l~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~---~~~~~----~~---------- 163 (270)
T 3rm3_A 102 GWLKQRCQTIFVTGLSMGGTLTLYLAEHHPD-ICGIVPINAAVDIPAIAAGMTGGG---ELPRY----LD---------- 163 (270)
T ss_dssp HHHHTTCSEEEEEEETHHHHHHHHHHHHCTT-CCEEEEESCCSCCHHHHHHSCC------CCSE----EE----------
T ss_pred HHHHhhCCcEEEEEEcHhHHHHHHHHHhCCC-ccEEEEEcceecccccccchhcch---hHHHH----HH----------
Confidence 9997 7899999999999999999999999 999999998765432221111000 00000 00
Q ss_pred HHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccc
Q 020064 186 VDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIR 265 (331)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 265 (331)
.+...+.... .............+...... ..+....+.++
T Consensus 164 --~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~- 204 (270)
T 3rm3_A 164 --SIGSDLKNPD----------------------VKELAYEKTPTASLLQLARL--------------MAQTKAKLDRI- 204 (270)
T ss_dssp --CCCCCCSCTT----------------------CCCCCCSEEEHHHHHHHHHH--------------HHHHHHTGGGC-
T ss_pred --HhCccccccc----------------------hHhhcccccChhHHHHHHHH--------------HHHHHhhhhhc-
Confidence 0000000000 00000000000000000000 11234567788
Q ss_pred cccEEEEecCCCCccCCcchHHHHHhCCCC--cEEEecCCCCCCCcCCchhHHHHHHHHHHHhhh
Q 020064 266 HINATIVQGRYDVCCPMMSAWDLHKAWPEA--DFKVVADAGHSANEPGIAAELVATNEKLKNLIK 328 (331)
Q Consensus 266 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~--~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~ 328 (331)
++|+|+++|++|.++|++.++.+.+.+++. ++++++++||+++.+...+++.+.|.+|+++..
T Consensus 205 ~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~ 269 (270)
T 3rm3_A 205 VCPALIFVSDEDHVVPPGNADIIFQGISSTEKEIVRLRNSYHVATLDYDQPMIIERSLEFFAKHA 269 (270)
T ss_dssp CSCEEEEEETTCSSSCTTHHHHHHHHSCCSSEEEEEESSCCSCGGGSTTHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEECCCCcccCHHHHHHHHHhcCCCcceEEEeCCCCcccccCccHHHHHHHHHHHHHhcC
Confidence 599999999999999999999999999876 899999999999988634999999999998754
|
| >2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=7.1e-32 Score=224.67 Aligned_cols=291 Identities=16% Similarity=0.143 Sum_probs=172.1
Q ss_pred ccceeEeCCCceEEEEeCCCCC-------C--CcEEEeccCCCCCC-CCCcccccC----CCCc---EEEEecCCCCCCC
Q 020064 23 STGILKVSDIHTIYWEQSGNPT-------G--HPVVFLHGGPGGGT-TPSNRRFFD----PDFY---RIILFDQRGAGKS 85 (331)
Q Consensus 23 ~~~~~~~~~g~~l~~~~~g~~~-------~--~~vl~~HG~~~~~~-~~~~~~~~~----~~g~---~vi~~D~~G~G~s 85 (331)
...++...+|.+++|..+|+++ + |+|||+||++++.. |..++..+. ..|| +|+++|+||||.|
T Consensus 21 ~~~~~~~~dg~~l~~~~~g~~~~~~~~~~~~~~~vvllHG~~~~~~~~~~~~~~L~~~~~~~G~~~~~vi~~D~~G~G~S 100 (398)
T 2y6u_A 21 PQSTLCATDRLELTYDVYTSAERQRRSRTATRLNLVFLHGSGMSKVVWEYYLPRLVAADAEGNYAIDKVLLIDQVNHGDS 100 (398)
T ss_dssp TTSBSSTTCCCEEEEEEEEESCTTTCCTTCEEEEEEEECCTTCCGGGGGGGGGGSCCCBTTTTEEEEEEEEECCTTSHHH
T ss_pred CCccccCCCceEEEEEEEecCCCCCCCCCCCCCeEEEEcCCCCcHHHHHHHHHHHHHhhhhcCcceeEEEEEcCCCCCCC
Confidence 3445567788899999887543 3 68999999776644 555666666 2388 9999999999999
Q ss_pred CCCCC---CCccchHHHHHHHHHHHHHhC----CCc--EEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhh
Q 020064 86 TPHAC---LDQNTTWDLIDDIEKLRQHLE----IPE--WQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDW 156 (331)
Q Consensus 86 ~~~~~---~~~~~~~~~~~~~~~~~~~~~----~~~--v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~ 156 (331)
..... ...+++.++++|+.++++.+. ..+ ++|+||||||.+++.+|..+|++|+++|++++..........
T Consensus 101 ~~~~~~~~~~~~~~~~~~~dl~~~l~~~~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 180 (398)
T 2y6u_A 101 AVRNRGRLGTNFNWIDGARDVLKIATCELGSIDSHPALNVVIGHSMGGFQALACDVLQPNLFHLLILIEPVVITRKAIGA 180 (398)
T ss_dssp HHHTTTTBCSCCCHHHHHHHHHHHHHHHTCSSTTCSEEEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCCCCCSC
T ss_pred CCCCccccCCCCCcchHHHHHHHHHHHhcccccccCCceEEEEEChhHHHHHHHHHhCchheeEEEEecccccccccccc
Confidence 75421 135789999999999998754 344 999999999999999999999999999999987653110000
Q ss_pred ---HhhcccccCChhhHHhhhccCCcc--hhhhhHHhhccc-cCC-CchHHHHHHHHHhhhHHHhhhcC-CCChhhhhcC
Q 020064 157 ---FYEGGAAAIYPDAWESFRDLIPEN--ERSCFVDAYSKR-LNS-DDKETQYAAARAWTKWEMMTAHL-LPNEENIKRG 228 (331)
Q Consensus 157 ---~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 228 (331)
.............+..+....... ........+... +.. ..... ...+.......... ..........
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (398)
T 2y6u_A 181 GRPGLPPDSPQIPENLYNSLRLKTCDHFANESEYVKYMRNGSFFTNAHSQI----LQNIIDFERTKASGDDEDGGPVRTK 256 (398)
T ss_dssp CCTTCCTTCCCCCHHHHHHHHHTCCCEESSHHHHHHHHHHTSTTTTSCHHH----HHHHHHHHEEC--------CCEEES
T ss_pred ccccccccccccchhhHHHhhhhccccCCCHHHHHHHhhcCcccccCCHHH----HHHHHHhcCccccccccCCCceEec
Confidence 000000000000111111000000 000000000000 000 00000 00000000000000 0000000000
Q ss_pred CccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCC
Q 020064 229 EDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSAN 308 (331)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 308 (331)
.. ...... ..........+....+.++ ++|+|+|+|++|.++|++.++.+.+.++++++++++++||+++
T Consensus 257 ~~--~~~~~~-------~~~~~~~~~~~~~~~l~~i-~~PvLii~G~~D~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~~ 326 (398)
T 2y6u_A 257 ME--QAQNLL-------CYMNMQTFAPFLISNVKFV-RKRTIHIVGARSNWCPPQNQLFLQKTLQNYHLDVIPGGSHLVN 326 (398)
T ss_dssp SC--HHHHHH-------TTSCGGGTHHHHHHHGGGC-CSEEEEEEETTCCSSCHHHHHHHHHHCSSEEEEEETTCCTTHH
T ss_pred CC--chhhhh-------hhcccccchHHHHHhcccc-CCCEEEEEcCCCCCCCHHHHHHHHHhCCCceEEEeCCCCccch
Confidence 00 000000 0000000122345678889 5999999999999999999999999999999999999999999
Q ss_pred cCCchhHHHHHHHHHHHhhh
Q 020064 309 EPGIAAELVATNEKLKNLIK 328 (331)
Q Consensus 309 ~~~~~~~~~~~i~~fl~~~~ 328 (331)
.+. ++++.+.|.+|+++..
T Consensus 327 ~e~-p~~~~~~i~~fl~~~~ 345 (398)
T 2y6u_A 327 VEA-PDLVIERINHHIHEFV 345 (398)
T ss_dssp HHS-HHHHHHHHHHHHHHHH
T ss_pred hcC-HHHHHHHHHHHHHHHH
Confidence 986 9999999999998753
|
| >3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A | Back alignment and structure |
|---|
Probab=99.97 E-value=7.6e-31 Score=204.45 Aligned_cols=225 Identities=19% Similarity=0.161 Sum_probs=154.6
Q ss_pred CCCcEEEeccCCCCCC-CCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCC--cEEEEEe
Q 020064 44 TGHPVVFLHGGPGGGT-TPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIP--EWQVFGG 120 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~-~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~lvG~ 120 (331)
++|+||++||++++.. |..++..+.++||+|+++|+||||.|........++.+++++|+.++++.+... +++++||
T Consensus 21 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~l~G~ 100 (251)
T 3dkr_A 21 TDTGVVLLHAYTGSPNDMNFMARALQRSGYGVYVPLFSGHGTVEPLDILTKGNPDIWWAESSAAVAHMTAKYAKVFVFGL 100 (251)
T ss_dssp SSEEEEEECCTTCCGGGGHHHHHHHHHTTCEEEECCCTTCSSSCTHHHHHHCCHHHHHHHHHHHHHHHHTTCSEEEEEES
T ss_pred CCceEEEeCCCCCCHHHHHHHHHHHHHCCCEEEecCCCCCCCCChhhhcCcccHHHHHHHHHHHHHHHHHhcCCeEEEEe
Confidence 5788999999776644 445666676789999999999999996543211227888899999998888654 9999999
Q ss_pred ChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhccccCCCchHH
Q 020064 121 SWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKET 200 (331)
Q Consensus 121 S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (331)
|+||.+++.+|.++|++++++++++|........ +... ..+...+.........
T Consensus 101 S~Gg~~a~~~a~~~p~~~~~~i~~~p~~~~~~~~---------------~~~~---------~~~~~~~~~~~~~~~~-- 154 (251)
T 3dkr_A 101 SLGGIFAMKALETLPGITAGGVFSSPILPGKHHL---------------VPGF---------LKYAEYMNRLAGKSDE-- 154 (251)
T ss_dssp HHHHHHHHHHHHHCSSCCEEEESSCCCCTTCBCH---------------HHHH---------HHHHHHHHHHHTCCCC--
T ss_pred chHHHHHHHHHHhCccceeeEEEecchhhccchh---------------hHHH---------HHHHHHHHhhcccCcc--
Confidence 9999999999999999999999998865422100 0000 0000000000000000
Q ss_pred HHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCCCcc
Q 020064 201 QYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCC 280 (331)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~ 280 (331)
...........+. .+... .......+.++ ++|+|+++|++|.++
T Consensus 155 ---------------------~~~~~~~~~~~~~-~~~~~-------------~~~~~~~~~~~-~~P~l~i~g~~D~~~ 198 (251)
T 3dkr_A 155 ---------------------STQILAYLPGQLA-AIDQF-------------ATTVAADLNLV-KQPTFIGQAGQDELV 198 (251)
T ss_dssp ---------------------HHHHHHHHHHHHH-HHHHH-------------HHHHHHTGGGC-CSCEEEEEETTCSSB
T ss_pred ---------------------hhhHHhhhHHHHH-HHHHH-------------HHHHhcccccc-CCCEEEEecCCCccc
Confidence 0000000000000 00000 11234567788 599999999999999
Q ss_pred CCcchHHHHHhCCC-C--cEEEecCCCCCCCcCCchhHHHHHHHHHHHhhhcC
Q 020064 281 PMMSAWDLHKAWPE-A--DFKVVADAGHSANEPGIAAELVATNEKLKNLIKNG 330 (331)
Q Consensus 281 ~~~~~~~~~~~~~~-~--~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~~~ 330 (331)
|++.++.+.+.+++ . ++++++++||.++.+..++++.+.|.+|++++..|
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~~g 251 (251)
T 3dkr_A 199 DGRLAYQLRDALINAARVDFHWYDDAKHVITVNSAHHALEEDVIAFMQQENEG 251 (251)
T ss_dssp CTTHHHHHHHHCTTCSCEEEEEETTCCSCTTTSTTHHHHHHHHHHHHHTTCC-
T ss_pred ChHHHHHHHHHhcCCCCceEEEeCCCCcccccccchhHHHHHHHHHHHhhcCC
Confidence 99999999999877 5 89999999999988755999999999999987654
|
| >4i19_A Epoxide hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.15A {Streptomyces carzinostaticus subsp} | Back alignment and structure |
|---|
Probab=99.97 E-value=6.5e-31 Score=216.00 Aligned_cols=123 Identities=19% Similarity=0.203 Sum_probs=102.1
Q ss_pred eeEeCCCceEEEEeCCC--CCCCcEEEeccCCCCCCCC-CcccccCCC---------CcEEEEecCCCCCCCCCCCCCCc
Q 020064 26 ILKVSDIHTIYWEQSGN--PTGHPVVFLHGGPGGGTTP-SNRRFFDPD---------FYRIILFDQRGAGKSTPHACLDQ 93 (331)
Q Consensus 26 ~~~~~~g~~l~~~~~g~--~~~~~vl~~HG~~~~~~~~-~~~~~~~~~---------g~~vi~~D~~G~G~s~~~~~~~~ 93 (331)
+....+|.+++|...++ +++++|||+||++++...| ..+..+.+. +|+|+++|+||||.|+.+.. ..
T Consensus 71 ~~~~i~g~~i~~~~~~~~~~~~~plll~HG~~~s~~~~~~~~~~L~~~~~~~~~~~~~~~vi~~dl~G~G~S~~~~~-~~ 149 (388)
T 4i19_A 71 FTTEIDGATIHFLHVRSPEPDATPMVITHGWPGTPVEFLDIIGPLTDPRAHGGDPADAFHLVIPSLPGFGLSGPLKS-AG 149 (388)
T ss_dssp EEEEETTEEEEEEEECCSSTTCEEEEEECCTTCCGGGGHHHHHHHHCGGGGTSCGGGCEEEEEECCTTSGGGCCCSS-CC
T ss_pred EEEEECCeEEEEEEccCCCCCCCeEEEECCCCCCHHHHHHHHHHHhCcccccCCCCCCeEEEEEcCCCCCCCCCCCC-CC
Confidence 44444777999987642 4578899999988775544 444444443 99999999999999997763 26
Q ss_pred cchHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccc
Q 020064 94 NTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLL 149 (331)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~ 149 (331)
++++++++++..+++.++.++++++||||||.+++.+|.++|++|++++++++...
T Consensus 150 ~~~~~~a~~~~~l~~~lg~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 205 (388)
T 4i19_A 150 WELGRIAMAWSKLMASLGYERYIAQGGDIGAFTSLLLGAIDPSHLAGIHVNLLQTN 205 (388)
T ss_dssp CCHHHHHHHHHHHHHHTTCSSEEEEESTHHHHHHHHHHHHCGGGEEEEEESSCCCC
T ss_pred CCHHHHHHHHHHHHHHcCCCcEEEEeccHHHHHHHHHHHhChhhceEEEEecCCCC
Confidence 79999999999999999999999999999999999999999999999999997554
|
| >3fla_A RIFR; alpha-beta hydrolase thioesterase, hydrolase; HET: MSE; 1.80A {Amycolatopsis mediterranei} PDB: 3flb_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5e-31 Score=207.53 Aligned_cols=229 Identities=14% Similarity=0.080 Sum_probs=149.8
Q ss_pred CCCCCcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCcEEEEEeC
Q 020064 42 NPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGS 121 (331)
Q Consensus 42 ~~~~~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG~S 121 (331)
+.++|+|||+||++++...|......+.++|+|+++|+||||.|.... ..++++++++++.++++.++.++++|+|||
T Consensus 17 ~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~lvG~S 94 (267)
T 3fla_A 17 PDARARLVCLPHAGGSASFFFPLAKALAPAVEVLAVQYPGRQDRRHEP--PVDSIGGLTNRLLEVLRPFGDRPLALFGHS 94 (267)
T ss_dssp TTCSEEEEEECCTTCCGGGGHHHHHHHTTTEEEEEECCTTSGGGTTSC--CCCSHHHHHHHHHHHTGGGTTSCEEEEEET
T ss_pred CCCCceEEEeCCCCCCchhHHHHHHHhccCcEEEEecCCCCCCCCCCC--CCcCHHHHHHHHHHHHHhcCCCceEEEEeC
Confidence 346789999999877655444333334556999999999999998655 467899999999999999998999999999
Q ss_pred hhHHHHHHHHHhCCCc----eeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhccccCCCc
Q 020064 122 WGSTLALAYSLAHPDK----VTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDD 197 (331)
Q Consensus 122 ~Gg~~a~~~a~~~p~~----v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (331)
|||.+++.+|..+|++ +++++++++......... .... .....+...+.. +....
T Consensus 95 ~Gg~ia~~~a~~~~~~~~~~v~~lvl~~~~~~~~~~~~-----~~~~---------------~~~~~~~~~~~~-~~~~~ 153 (267)
T 3fla_A 95 MGAIIGYELALRMPEAGLPAPVHLFASGRRAPSRYRDD-----DVRG---------------ASDERLVAELRK-LGGSD 153 (267)
T ss_dssp HHHHHHHHHHHHTTTTTCCCCSEEEEESCCCTTCCCCS-----CTTC---------------CCHHHHHHHHHH-TCHHH
T ss_pred hhHHHHHHHHHhhhhhccccccEEEECCCCccccccch-----hhcc---------------cchHHHHHHHHH-hcCcc
Confidence 9999999999999986 999999987654221100 0000 000000000000 00000
Q ss_pred hHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCC
Q 020064 198 KETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYD 277 (331)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D 277 (331)
. ... ..+..... ....+...+... . ..... ....+ ++|+|+++|++|
T Consensus 154 ~--~~~----------------~~~~~~~~-~~~~~~~~~~~~-----~-------~~~~~-~~~~~-~~P~l~i~g~~D 200 (267)
T 3fla_A 154 A--AML----------------ADPELLAM-VLPAIRSDYRAV-----E-------TYRHE-PGRRV-DCPVTVFTGDHD 200 (267)
T ss_dssp H--HHH----------------HSHHHHHH-HHHHHHHHHHHH-----H-------HCCCC-TTCCB-SSCEEEEEETTC
T ss_pred h--hhc----------------cCHHHHHH-HHHHHHHHHHhh-----h-------ccccc-ccCcC-CCCEEEEecCCC
Confidence 0 000 00000000 000000000000 0 00000 11567 699999999999
Q ss_pred CccCCcchHHHHHhCCC-CcEEEecCCCCCCCcCCchhHHHHHHHHHHHhhh
Q 020064 278 VCCPMMSAWDLHKAWPE-ADFKVVADAGHSANEPGIAAELVATNEKLKNLIK 328 (331)
Q Consensus 278 ~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~ 328 (331)
.++|++..+.+.+.+++ ++++++++ ||+++.++ ++++.+.|.+|+++..
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~-~~~~~~~i~~fl~~~~ 250 (267)
T 3fla_A 201 PRVSVGEARAWEEHTTGPADLRVLPG-GHFFLVDQ-AAPMIATMTEKLAGPA 250 (267)
T ss_dssp TTCCHHHHHGGGGGBSSCEEEEEESS-STTHHHHT-HHHHHHHHHHHTC---
T ss_pred CCCCHHHHHHHHHhcCCCceEEEecC-CceeeccC-HHHHHHHHHHHhcccc
Confidence 99999999999999987 89999998 99999886 9999999999998764
|
| >1pja_A Palmitoyl-protein thioesterase 2 precursor; hydrolase, glycoprotein, lysosome; HET: NAG; 2.70A {Homo sapiens} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=99.97 E-value=1e-30 Score=209.50 Aligned_cols=236 Identities=11% Similarity=0.025 Sum_probs=149.7
Q ss_pred CCCcEEEeccCCCCCC-CCCcccccCCC--CcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCcEEEEEe
Q 020064 44 TGHPVVFLHGGPGGGT-TPSNRRFFDPD--FYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGG 120 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~-~~~~~~~~~~~--g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG~ 120 (331)
++++|||+||++++.. |......+.+. ||+|+++|+||||.|..+. .++++++++++.++++.+ .++++++||
T Consensus 35 ~~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~vi~~D~~G~G~s~~~~---~~~~~~~~~~l~~~~~~~-~~~~~lvGh 110 (302)
T 1pja_A 35 SYKPVIVVHGLFDSSYSFRHLLEYINETHPGTVVTVLDLFDGRESLRPL---WEQVQGFREAVVPIMAKA-PQGVHLICY 110 (302)
T ss_dssp CCCCEEEECCTTCCGGGGHHHHHHHHHHSTTCCEEECCSSCSGGGGSCH---HHHHHHHHHHHHHHHHHC-TTCEEEEEE
T ss_pred CCCeEEEECCCCCChhHHHHHHHHHHhcCCCcEEEEeccCCCccchhhH---HHHHHHHHHHHHHHhhcC-CCcEEEEEE
Confidence 6789999999776644 44555566556 8999999999999987654 367889999999999988 689999999
Q ss_pred ChhHHHHHHHHHhCCC-ceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhccccCCCchH
Q 020064 121 SWGSTLALAYSLAHPD-KVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKE 199 (331)
Q Consensus 121 S~Gg~~a~~~a~~~p~-~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (331)
||||.+++.+|.++|+ +|+++|+++++....... ....... ..................
T Consensus 111 S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~------------~~~~~~~---~~~~~~~~~~~~~~~~~~----- 170 (302)
T 1pja_A 111 SQGGLVCRALLSVMDDHNVDSFISLSSPQMGQYGD------------TDYLKWL---FPTSMRSNLYRICYSPWG----- 170 (302)
T ss_dssp THHHHHHHHHHHHCTTCCEEEEEEESCCTTCBCSC------------CHHHHHH---CTTCCHHHHHHHHTSTTG-----
T ss_pred CHHHHHHHHHHHhcCccccCEEEEECCCccccccc------------chhhhhH---HHHHHHHHHhhccchHHH-----
Confidence 9999999999999999 799999999865421110 0000000 000000000000000000
Q ss_pred HHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCCCc
Q 020064 200 TQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVC 279 (331)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~ 279 (331)
. .........++.. ...+.. ....... ...........+..+.+.++ + |+++|+|++|.+
T Consensus 171 ----------~-~~~~~~~~~~~~~-----~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~l~~i-~-P~lii~G~~D~~ 230 (302)
T 1pja_A 171 ----------Q-EFSICNYWHDPHH-----DDLYLN-ASSFLAL-INGERDHPNATVWRKNFLRV-G-HLVLIGGPDDGV 230 (302)
T ss_dssp ----------G-GSTGGGGBCCTTC-----HHHHHH-HCSSHHH-HTTSSCCTTHHHHHHHHTTC-S-EEEEEECTTCSS
T ss_pred ----------H-HhhhhhcccChhh-----hhhhhc-cchHHHH-hhcCCccccchhHHHHHhcc-C-cEEEEEeCCCCc
Confidence 0 0000000000000 000000 0000000 00000000122346678889 7 999999999999
Q ss_pred cCCcchHHHHHhCCC---------------------------CcEEEecCCCCCCCcCCchhHHHHHHHHHH
Q 020064 280 CPMMSAWDLHKAWPE---------------------------ADFKVVADAGHSANEPGIAAELVATNEKLK 324 (331)
Q Consensus 280 ~~~~~~~~~~~~~~~---------------------------~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl 324 (331)
+|++.++.+.+..++ +++++++++||+++.++ ++++.+.|.+|+
T Consensus 231 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~gH~~~~e~-p~~~~~~i~~fl 301 (302)
T 1pja_A 231 ITPWQSSFFGFYDANETVLEMEEQLVYLRDSFGLKTLLARGAIVRCPMAGISHTAWHSN-RTLYETCIEPWL 301 (302)
T ss_dssp SSSGGGGGTCEECTTCCEECGGGSHHHHTTTTSHHHHHHTTCEEEEECSSCCTTTTTSC-HHHHHHHTGGGC
T ss_pred cchhHhhHhhhcCCcccccchhhhhhhhhhhhchhhHhhcCCeEEEEecCccccccccC-HHHHHHHHHHhc
Confidence 999988888766665 89999999999999997 999999999986
|
| >3g02_A Epoxide hydrolase; alpha/beta hydrolase fold, enantioselective, mutant, directed evolution; 1.50A {Aspergillus niger} SCOP: c.69.1.11 PDB: 1qo7_A 3g0i_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-30 Score=214.14 Aligned_cols=116 Identities=16% Similarity=0.139 Sum_probs=94.0
Q ss_pred CCCceEEEEeCCC--CCCCcEEEeccCCCCCCC-CCcccccCC------CCcEEEEecCCCCCCCCCCCCCCccchHHHH
Q 020064 30 SDIHTIYWEQSGN--PTGHPVVFLHGGPGGGTT-PSNRRFFDP------DFYRIILFDQRGAGKSTPHACLDQNTTWDLI 100 (331)
Q Consensus 30 ~~g~~l~~~~~g~--~~~~~vl~~HG~~~~~~~-~~~~~~~~~------~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~ 100 (331)
.+|.+|+|...++ +++++|||+||++++... ...+..+.+ .||+||++|+||||.|+.+.....+++++++
T Consensus 92 i~g~~i~~~~~~~~~~~~~pllllHG~~~s~~~~~~~~~~L~~~~~~~~~gf~vv~~DlpG~G~S~~~~~~~~~~~~~~a 171 (408)
T 3g02_A 92 IEGLTIHFAALFSEREDAVPIALLHGWPGSFVEFYPILQLFREEYTPETLPFHLVVPSLPGYTFSSGPPLDKDFGLMDNA 171 (408)
T ss_dssp ETTEEEEEEEECCSCTTCEEEEEECCSSCCGGGGHHHHHHHHHHCCTTTCCEEEEEECCTTSTTSCCSCSSSCCCHHHHH
T ss_pred ECCEEEEEEEecCCCCCCCeEEEECCCCCcHHHHHHHHHHHhcccccccCceEEEEECCCCCCCCCCCCCCCCCCHHHHH
Confidence 3777999998875 457899999998877554 344444433 5899999999999999976533578999999
Q ss_pred HHHHHHHHHhCCC-cEEEEEeChhHHHHHHHHHhCCCceeeEEEecc
Q 020064 101 DDIEKLRQHLEIP-EWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGI 146 (331)
Q Consensus 101 ~~~~~~~~~~~~~-~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~ 146 (331)
+++..+++.++.+ +++++||||||.+++.+|.++|+.+ ++++..+
T Consensus 172 ~~~~~l~~~lg~~~~~~lvG~S~Gg~ia~~~A~~~p~~~-~~~l~~~ 217 (408)
T 3g02_A 172 RVVDQLMKDLGFGSGYIIQGGDIGSFVGRLLGVGFDACK-AVHLNFC 217 (408)
T ss_dssp HHHHHHHHHTTCTTCEEEEECTHHHHHHHHHHHHCTTEE-EEEESCC
T ss_pred HHHHHHHHHhCCCCCEEEeCCCchHHHHHHHHHhCCCce-EEEEeCC
Confidence 9999999999997 9999999999999999999997644 4444433
|
| >2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.97 E-value=2.8e-29 Score=195.39 Aligned_cols=196 Identities=16% Similarity=0.135 Sum_probs=148.3
Q ss_pred CCCc--cceeEeCCCceEEEEeCC--CCCCCcEEEeccCCCCC-CC-----CCcccccCCCCcEEEEecCCCCCCCCCCC
Q 020064 20 EPYS--TGILKVSDIHTIYWEQSG--NPTGHPVVFLHGGPGGG-TT-----PSNRRFFDPDFYRIILFDQRGAGKSTPHA 89 (331)
Q Consensus 20 ~~~~--~~~~~~~~g~~l~~~~~g--~~~~~~vl~~HG~~~~~-~~-----~~~~~~~~~~g~~vi~~D~~G~G~s~~~~ 89 (331)
.+++ +..+...+| ++.+.... .+..|+||++||+++.. .+ ..+...+.+.||.|+++|+||+|.|....
T Consensus 19 ~~~e~~~~~~~~~~g-~l~~~~~~p~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~ 97 (249)
T 2i3d_A 19 FQGHMPEVIFNGPAG-RLEGRYQPSKEKSAPIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTLRFNFRSIGRSQGEF 97 (249)
T ss_dssp -----CEEEEEETTE-EEEEEEECCSSTTCCEEEEECCCGGGTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTCCSCC
T ss_pred ccCceeEEEEECCCc-eEEEEEEcCCCCCCCEEEEECCCcccCCCccchHHHHHHHHHHHCCCEEEEECCCCCCCCCCCC
Confidence 3455 778888888 77654433 23567899999964322 11 34556666789999999999999998654
Q ss_pred CCCccchHHHHHHHHHHHHHhC-----CCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhccccc
Q 020064 90 CLDQNTTWDLIDDIEKLRQHLE-----IPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAA 164 (331)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~-----~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~ 164 (331)
. .....+ +|+.++++.+. .++++++|||+||.+++.++..+|+ ++++|++++.....
T Consensus 98 ~---~~~~~~-~d~~~~i~~l~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~------------- 159 (249)
T 2i3d_A 98 D---HGAGEL-SDAASALDWVQSLHPDSKSCWVAGYSFGAWIGMQLLMRRPE-IEGFMSIAPQPNTY------------- 159 (249)
T ss_dssp C---SSHHHH-HHHHHHHHHHHHHCTTCCCEEEEEETHHHHHHHHHHHHCTT-EEEEEEESCCTTTS-------------
T ss_pred C---CccchH-HHHHHHHHHHHHhCCCCCeEEEEEECHHHHHHHHHHhcCCC-ccEEEEEcCchhhh-------------
Confidence 2 234444 77776666653 2479999999999999999999998 99999999854210
Q ss_pred CChhhHHhhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhh
Q 020064 165 IYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHY 244 (331)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (331)
T Consensus 160 -------------------------------------------------------------------------------- 159 (249)
T 2i3d_A 160 -------------------------------------------------------------------------------- 159 (249)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhccCCCCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCC-----CCcEEEecCCCCCCCcCCchhHHHHH
Q 020064 245 FLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWP-----EADFKVVADAGHSANEPGIAAELVAT 319 (331)
Q Consensus 245 ~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~-----~~~~~~~~~~gH~~~~~~~~~~~~~~ 319 (331)
. ...+.++ ++|+|+++|++|.++|.+.++.+.+.++ ++++++++++||.+. +. ++++.+.
T Consensus 160 ---------~---~~~~~~~-~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~-~~-~~~~~~~ 224 (249)
T 2i3d_A 160 ---------D---FSFLAPC-PSSGLIINGDADKVAPEKDVNGLVEKLKTQKGILITHRTLPGANHFFN-GK-VDELMGE 224 (249)
T ss_dssp ---------C---CTTCTTC-CSCEEEEEETTCSSSCHHHHHHHHHHHTTSTTCCEEEEEETTCCTTCT-TC-HHHHHHH
T ss_pred ---------h---hhhhccc-CCCEEEEEcCCCCCCCHHHHHHHHHHHhhccCCceeEEEECCCCcccc-cC-HHHHHHH
Confidence 0 0123456 5999999999999999999999999887 779999999999988 54 9999999
Q ss_pred HHHHHHhhhc
Q 020064 320 NEKLKNLIKN 329 (331)
Q Consensus 320 i~~fl~~~~~ 329 (331)
|.+|+++..+
T Consensus 225 i~~fl~~~l~ 234 (249)
T 2i3d_A 225 CEDYLDRRLN 234 (249)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHhcC
Confidence 9999987653
|
| >3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.7e-29 Score=189.34 Aligned_cols=194 Identities=16% Similarity=0.114 Sum_probs=148.0
Q ss_pred CCccceeEeCCCceEEEEeCCCC---CCCcEEEeccCC---CC--CC-CCCcccccCCCCcEEEEecCCCCCCCCCCCCC
Q 020064 21 PYSTGILKVSDIHTIYWEQSGNP---TGHPVVFLHGGP---GG--GT-TPSNRRFFDPDFYRIILFDQRGAGKSTPHACL 91 (331)
Q Consensus 21 ~~~~~~~~~~~g~~l~~~~~g~~---~~~~vl~~HG~~---~~--~~-~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~ 91 (331)
..+...++..+| ++.+....+. +.|+||++||++ ++ .. +..+...+.+.||+|+++|+||+|.|......
T Consensus 5 ~~~~~~~~~~~g-~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~ 83 (208)
T 3trd_A 5 TNEDFLIQGPVG-QLEVMITRPKGIEKSVTGIICHPHPLHGGTMNNKVVTTLAKALDELGLKTVRFNFRGVGKSQGRYDN 83 (208)
T ss_dssp SSSCEEEECSSS-EEEEEEECCSSCCCSEEEEEECSCGGGTCCTTCHHHHHHHHHHHHTTCEEEEECCTTSTTCCSCCCT
T ss_pred ccceEEEECCCc-eEEEEEEcCCCCCCCCEEEEEcCCCCCCCccCCchHHHHHHHHHHCCCEEEEEecCCCCCCCCCccc
Confidence 356778888999 9888766543 557899999942 22 11 23456667678999999999999999866322
Q ss_pred CccchHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHH
Q 020064 92 DQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWE 171 (331)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (331)
.....+++.+.+..+.+.++.++++++|||+||.+++.++ .+| +++++|+++++...
T Consensus 84 ~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~a-~~~-~v~~~v~~~~~~~~--------------------- 140 (208)
T 3trd_A 84 GVGEVEDLKAVLRWVEHHWSQDDIWLAGFSFGAYISAKVA-YDQ-KVAQLISVAPPVFY--------------------- 140 (208)
T ss_dssp TTHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHH-HHS-CCSEEEEESCCTTS---------------------
T ss_pred hHHHHHHHHHHHHHHHHhCCCCeEEEEEeCHHHHHHHHHh-ccC-CccEEEEecccccc---------------------
Confidence 2333455555555555666778999999999999999999 777 89999999985310
Q ss_pred hhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCC
Q 020064 172 SFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFF 251 (331)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (331)
T Consensus 141 -------------------------------------------------------------------------------- 140 (208)
T 3trd_A 141 -------------------------------------------------------------------------------- 140 (208)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCCC-CcEEEecCCCCCCCcCCchhHHHHHHHHHHH
Q 020064 252 PSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPE-ADFKVVADAGHSANEPGIAAELVATNEKLKN 325 (331)
Q Consensus 252 ~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~ 325 (331)
.+ ...+..+ ++|+++++|++|.++|++.++.+.+.+++ +++++++++||.+..+ .+++.+.|.+||+
T Consensus 141 ---~~-~~~~~~~-~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~--~~~~~~~i~~fl~ 208 (208)
T 3trd_A 141 ---EG-FASLTQM-ASPWLIVQGDQDEVVPFEQVKAFVNQISSPVEFVVMSGASHFFHGR--LIELRELLVRNLA 208 (208)
T ss_dssp ---GG-GTTCCSC-CSCEEEEEETTCSSSCHHHHHHHHHHSSSCCEEEEETTCCSSCTTC--HHHHHHHHHHHHC
T ss_pred ---CC-chhhhhc-CCCEEEEECCCCCCCCHHHHHHHHHHccCceEEEEeCCCCCccccc--HHHHHHHHHHHhC
Confidence 00 0123444 59999999999999999999999999976 9999999999998866 5889999999973
|
| >3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-29 Score=202.34 Aligned_cols=224 Identities=19% Similarity=0.143 Sum_probs=161.5
Q ss_pred ceeEeCCCceEEEEeCCCCCCCcEEEeccCCCCCC-CCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHH
Q 020064 25 GILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGT-TPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDI 103 (331)
Q Consensus 25 ~~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~-~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~ 103 (331)
..+.. +|.++.+...+++..|+||++||++++.. +..++..+.+.||.|+++|+||+|.|.... ..++..++++|+
T Consensus 9 ~~~~~-~g~~l~~~~~~p~~~p~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~g~s~~~~--~~~~~~~~~~d~ 85 (290)
T 3ksr_A 9 IEIPV-GQDELSGTLLTPTGMPGVLFVHGWGGSQHHSLVRAREAVGLGCICMTFDLRGHEGYASMR--QSVTRAQNLDDI 85 (290)
T ss_dssp EEEEE-TTEEEEEEEEEEESEEEEEEECCTTCCTTTTHHHHHHHHTTTCEEECCCCTTSGGGGGGT--TTCBHHHHHHHH
T ss_pred EEecC-CCeEEEEEEecCCCCcEEEEeCCCCCCcCcHHHHHHHHHHCCCEEEEeecCCCCCCCCCc--ccccHHHHHHHH
Confidence 34455 56689888777656789999999776644 455666777789999999999999998654 457889999999
Q ss_pred HHHHHHhC------CCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccC
Q 020064 104 EKLRQHLE------IPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLI 177 (331)
Q Consensus 104 ~~~~~~~~------~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (331)
.++++.+. .++++++|||+||.+++.++.++| ++++++++|....... ...+......
T Consensus 86 ~~~i~~l~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~~--~~~~~l~~p~~~~~~~----------~~~~~~~~~~---- 149 (290)
T 3ksr_A 86 KAAYDQLASLPYVDAHSIAVVGLSYGGYLSALLTRERP--VEWLALRSPALYKDAH----------WDQPKVSLNA---- 149 (290)
T ss_dssp HHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHTTTSC--CSEEEEESCCCCCSSC----------TTSBHHHHHH----
T ss_pred HHHHHHHHhcCCCCccceEEEEEchHHHHHHHHHHhCC--CCEEEEeCcchhhhhh----------hhcccccccC----
Confidence 99999883 248999999999999999999988 8889988875532110 0000000000
Q ss_pred CcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchh
Q 020064 178 PENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFL 257 (331)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (331)
......+ . ...........
T Consensus 150 -----~~~~~~~-------------------------~-------------------------------~~~~~~~~~~~ 168 (290)
T 3ksr_A 150 -----DPDLMDY-------------------------R-------------------------------RRALAPGDNLA 168 (290)
T ss_dssp -----STTHHHH-------------------------T-------------------------------TSCCCGGGCHH
T ss_pred -----Chhhhhh-------------------------h-------------------------------hhhhhhccccH
Confidence 0000000 0 00000002234
Q ss_pred hhhccccccccEEEEecCCCCccCCcchHHHHHhCCCCc---EEEecCCCCCCCcCCchhHHHHHHHHHHHhhhc
Q 020064 258 LDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEAD---FKVVADAGHSANEPGIAAELVATNEKLKNLIKN 329 (331)
Q Consensus 258 ~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~---~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~~ 329 (331)
...+.++ ++|+|+++|++|.+++++..+.+.+.+++.. +++++++||.+..+..++++.+.+.+|+++...
T Consensus 169 ~~~~~~~-~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~~ 242 (290)
T 3ksr_A 169 LAACAQY-KGDVLLVEAENDVIVPHPVMRNYADAFTNARSLTSRVIAGADHALSVKEHQQEYTRALIDWLTEMVV 242 (290)
T ss_dssp HHHHHHC-CSEEEEEEETTCSSSCHHHHHHHHHHTTTSSEEEEEEETTCCTTCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhc-CCCeEEEEecCCcccChHHHHHHHHHhccCCCceEEEcCCCCCCCCcchHHHHHHHHHHHHHHHHhc
Confidence 4567778 5999999999999999999999999987655 999999999887654489999999999987643
|
| >3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.5e-28 Score=194.03 Aligned_cols=255 Identities=13% Similarity=0.125 Sum_probs=156.0
Q ss_pred cceeEeCCCceEEEEeCCC---CCCCcEEEeccCC---CCCCC-C-CcccccCCCCcEEEEecCCCCCCCCCCCCCCccc
Q 020064 24 TGILKVSDIHTIYWEQSGN---PTGHPVVFLHGGP---GGGTT-P-SNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNT 95 (331)
Q Consensus 24 ~~~~~~~~g~~l~~~~~g~---~~~~~vl~~HG~~---~~~~~-~-~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~ 95 (331)
...+...||.++++..+.+ +++|+||++||++ ++... . .....+.+. |+|+++|+||+|.+.. ...
T Consensus 5 ~~~~~~~dg~~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~l~~~-~~v~~~d~~~~~~~~~-----~~~ 78 (275)
T 3h04_A 5 KYKVITKDAFALPYTIIKAKNQPTKGVIVYIHGGGLMFGKANDLSPQYIDILTEH-YDLIQLSYRLLPEVSL-----DCI 78 (275)
T ss_dssp EEEEECTTSCEEEEEEECCSSSSCSEEEEEECCSTTTSCCTTCSCHHHHHHHTTT-EEEEEECCCCTTTSCH-----HHH
T ss_pred EEEEecCCcEEEEEEEEccCCCCCCCEEEEEECCcccCCchhhhHHHHHHHHHhC-ceEEeeccccCCcccc-----chh
Confidence 4567778888998876643 2467899999976 44332 2 344444444 9999999999987642 345
Q ss_pred hHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhc
Q 020064 96 TWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRD 175 (331)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (331)
.+++.+.+..+.+.++.++++++||||||.+++.+|.+ ++++++|++++......... .. ..........
T Consensus 79 ~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~--~~v~~~v~~~~~~~~~~~~~--~~------~~~~~~~~~~ 148 (275)
T 3h04_A 79 IEDVYASFDAIQSQYSNCPIFTFGRSSGAYLSLLIARD--RDIDGVIDFYGYSRINTEPF--KT------TNSYYAKIAQ 148 (275)
T ss_dssp HHHHHHHHHHHHHTTTTSCEEEEEETHHHHHHHHHHHH--SCCSEEEEESCCSCSCSHHH--HS------CCHHHHHHHT
T ss_pred HHHHHHHHHHHHhhCCCCCEEEEEecHHHHHHHHHhcc--CCccEEEecccccccccccc--cc------ccchhhcccc
Confidence 66777777778888888899999999999999999998 78999999998765321100 00 0000000000
Q ss_pred cCCcchhhhhHHhhccc--cCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccC-CCC
Q 020064 176 LIPENERSCFVDAYSKR--LNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKG-FFP 252 (331)
Q Consensus 176 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 252 (331)
.+.. .....+... ................. ....... .+.... ...
T Consensus 149 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~-~~~~~~~~~~ 197 (275)
T 3h04_A 149 SINE----TMIAQLTSPTPVVQDQIAQRFLIYVYAR--------------------------GTGKWIN-MINIADYTDS 197 (275)
T ss_dssp TSCH----HHHHTTSCSSCCSSCSSGGGHHHHHHHH--------------------------HHTCHHH-HHCCSCTTSG
T ss_pred cchH----HHHhcccCCCCcCCCccccchhhhhhhh--------------------------hcCchHH-hhcccccccc
Confidence 0000 000000000 00000000000000000 0000000 000000 000
Q ss_pred CcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCch---hHHHHHHHHHHHhhh
Q 020064 253 SDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIA---AELVATNEKLKNLIK 328 (331)
Q Consensus 253 ~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~---~~~~~~i~~fl~~~~ 328 (331)
........+.++ . |+|+++|++|.++|++.++.+.+.+++.++++++++||.++.+. + +++.+.+.+|+++..
T Consensus 198 ~~~~~~~~~~~~-~-P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~-~~~~~~~~~~i~~fl~~~l 273 (275)
T 3h04_A 198 KYNIAPDELKTL-P-PVFIAHCNGDYDVPVEESEHIMNHVPHSTFERVNKNEHDFDRRP-NDEAITIYRKVVDFLNAIT 273 (275)
T ss_dssp GGSCCHHHHTTC-C-CEEEEEETTCSSSCTHHHHHHHTTCSSEEEEEECSSCSCTTSSC-CHHHHHHHHHHHHHHHHHH
T ss_pred ccccccchhccC-C-CEEEEecCCCCCCChHHHHHHHHhcCCceEEEeCCCCCCcccCC-chhHHHHHHHHHHHHHHHh
Confidence 001112345677 5 99999999999999999999999999999999999999998886 5 799999999998753
|
| >2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-29 Score=207.95 Aligned_cols=119 Identities=18% Similarity=0.095 Sum_probs=94.9
Q ss_pred CCceEEEEeCCCCCCCcEEEeccCCCCCC------CC-----------CcccccCCCCcEEEEecCCCCCCCCCCCCC--
Q 020064 31 DIHTIYWEQSGNPTGHPVVFLHGGPGGGT------TP-----------SNRRFFDPDFYRIILFDQRGAGKSTPHACL-- 91 (331)
Q Consensus 31 ~g~~l~~~~~g~~~~~~vl~~HG~~~~~~------~~-----------~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~-- 91 (331)
++..++|...+.+++|+||++||++++.. |. .+...+.++||+|+++|+||||.|......
T Consensus 36 ~~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~ 115 (354)
T 2rau_A 36 DIISLHKVNLIGGGNDAVLILPGTWSSGEQLVTISWNGVHYTIPDYRKSIVLYLARNGFNVYTIDYRTHYVPPFLKDRQL 115 (354)
T ss_dssp CEEEEEEEEETTCCEEEEEEECCTTCCHHHHHHSEETTEECSCCCGGGCHHHHHHHTTEEEEEEECGGGGCCTTCCGGGG
T ss_pred CceEEEeecccCCCCCEEEEECCCCCCccccccccccccccccccchhhHHHHHHhCCCEEEEecCCCCCCCCccccccc
Confidence 45577777655557889999999777643 22 455566668999999999999999854420
Q ss_pred ---CccchHHHHHHHHHHHHH----hCCCcEEEEEeChhHHHHHHHHHhC-CCceeeEEEeccccc
Q 020064 92 ---DQNTTWDLIDDIEKLRQH----LEIPEWQVFGGSWGSTLALAYSLAH-PDKVTGLVLRGIFLL 149 (331)
Q Consensus 92 ---~~~~~~~~~~~~~~~~~~----~~~~~v~lvG~S~Gg~~a~~~a~~~-p~~v~~li~~~~~~~ 149 (331)
..++++++++|+.++++. ++.++++++||||||.+++.+|.++ |++++++|++++.+.
T Consensus 116 ~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~p~~v~~lvl~~~~~~ 181 (354)
T 2rau_A 116 SFTANWGWSTWISDIKEVVSFIKRDSGQERIYLAGESFGGIAALNYSSLYWKNDIKGLILLDGGPT 181 (354)
T ss_dssp GGGTTCSHHHHHHHHHHHHHHHHHHHCCSSEEEEEETHHHHHHHHHHHHHHHHHEEEEEEESCSCB
T ss_pred ccccCCcHHHHHHHHHHHHHHHHHhcCCceEEEEEECHhHHHHHHHHHhcCccccceEEEeccccc
Confidence 146778899999888887 5788999999999999999999999 999999999976543
|
| >2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase fold, structural genomics, structural G of pathogenic protozoa consortium; 2.20A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.8e-28 Score=198.37 Aligned_cols=110 Identities=17% Similarity=0.157 Sum_probs=82.0
Q ss_pred ceEEEEeCC-C-CCCCcEEEeccCCCCCCCCC----cccccCCCCcEEEEec----CCCCCCCCCCCCCCccchHHHHHH
Q 020064 33 HTIYWEQSG-N-PTGHPVVFLHGGPGGGTTPS----NRRFFDPDFYRIILFD----QRGAGKSTPHACLDQNTTWDLIDD 102 (331)
Q Consensus 33 ~~l~~~~~g-~-~~~~~vl~~HG~~~~~~~~~----~~~~~~~~g~~vi~~D----~~G~G~s~~~~~~~~~~~~~~~~~ 102 (331)
..++|...| + ..+|+|||+||++++..++. +...+ +.||+|+++| +||||.|... ...+++.+.
T Consensus 24 ~~~~y~~~g~~~~~~~~vvllHG~~~~~~~~~~~~~l~~~L-~~g~~Vi~~Dl~~D~~G~G~S~~~-----~~~~d~~~~ 97 (335)
T 2q0x_A 24 PYCKIPVFMMNMDARRCVLWVGGQTESLLSFDYFTNLAEEL-QGDWAFVQVEVPSGKIGSGPQDHA-----HDAEDVDDL 97 (335)
T ss_dssp TTEEEEEEEECTTSSSEEEEECCTTCCTTCSTTHHHHHHHH-TTTCEEEEECCGGGBTTSCSCCHH-----HHHHHHHHH
T ss_pred CceeEEEeccCCCCCcEEEEECCCCccccchhHHHHHHHHH-HCCcEEEEEeccCCCCCCCCcccc-----CcHHHHHHH
Confidence 588888776 3 24578999999776544332 33444 7899999995 5999998632 123444444
Q ss_pred HHHHHHHhCCCcEEEEEeChhHHHHHHHHH--hCCCceeeEEEecccc
Q 020064 103 IEKLRQHLEIPEWQVFGGSWGSTLALAYSL--AHPDKVTGLVLRGIFL 148 (331)
Q Consensus 103 ~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~--~~p~~v~~li~~~~~~ 148 (331)
+..+.+.++.++++|+||||||.+++.+|. .+|++|+++|++++..
T Consensus 98 ~~~l~~~l~~~~~~LvGhSmGG~iAl~~A~~~~~p~rV~~lVL~~~~~ 145 (335)
T 2q0x_A 98 IGILLRDHCMNEVALFATSTGTQLVFELLENSAHKSSITRVILHGVVC 145 (335)
T ss_dssp HHHHHHHSCCCCEEEEEEGGGHHHHHHHHHHCTTGGGEEEEEEEEECC
T ss_pred HHHHHHHcCCCcEEEEEECHhHHHHHHHHHhccchhceeEEEEECCcc
Confidence 444555578899999999999999999999 5799999999998754
|
| >3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.7e-28 Score=199.16 Aligned_cols=235 Identities=17% Similarity=0.174 Sum_probs=156.4
Q ss_pred ccceeEeCCCceEEEEeCC---CCCCCcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCC----------
Q 020064 23 STGILKVSDIHTIYWEQSG---NPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHA---------- 89 (331)
Q Consensus 23 ~~~~~~~~~g~~l~~~~~g---~~~~~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~---------- 89 (331)
+...+...+|.+++++... ..+.|+||++||++++...+.....+++.||.|+++|+||+|.|....
T Consensus 83 ~~~~~~~~~g~~l~~~~~~P~~~~~~p~vv~~HG~g~~~~~~~~~~~~~~~G~~v~~~D~rG~g~s~~~~~~~~~~~~~~ 162 (346)
T 3fcy_A 83 YDLYFTGVRGARIHAKYIKPKTEGKHPALIRFHGYSSNSGDWNDKLNYVAAGFTVVAMDVRGQGGQSQDVGGVTGNTLNG 162 (346)
T ss_dssp EEEEEECGGGCEEEEEEEEESCSSCEEEEEEECCTTCCSCCSGGGHHHHTTTCEEEEECCTTSSSSCCCCCCCSSCCSBC
T ss_pred EEEEEEcCCCCEEEEEEEecCCCCCcCEEEEECCCCCCCCChhhhhHHHhCCcEEEEEcCCCCCCCCCCCcccCCCCcCc
Confidence 3445666678788877553 234678999999877765555555677899999999999999887543
Q ss_pred --------CCCccchHHHHHHHHHHHHHh------CCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhh
Q 020064 90 --------CLDQNTTWDLIDDIEKLRQHL------EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEID 155 (331)
Q Consensus 90 --------~~~~~~~~~~~~~~~~~~~~~------~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~ 155 (331)
....+.+....+|+..+++.+ +.++++++|||+||.+++.+|..+|+ ++++|+++|.......
T Consensus 163 ~~~~g~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p~-v~~~vl~~p~~~~~~~-- 239 (346)
T 3fcy_A 163 HIIRGLDDDADNMLFRHIFLDTAQLAGIVMNMPEVDEDRVGVMGPSQGGGLSLACAALEPR-VRKVVSEYPFLSDYKR-- 239 (346)
T ss_dssp SSSTTTTSCGGGCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTT-CCEEEEESCSSCCHHH--
T ss_pred ceeccccCCHHHHHHHHHHHHHHHHHHHHHhCCCCCcCcEEEEEcCHHHHHHHHHHHhCcc-ccEEEECCCcccCHHH--
Confidence 123345566777777776655 33589999999999999999999997 9999999885432110
Q ss_pred hHhhcccccCChhhHHhhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHH
Q 020064 156 WFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSL 235 (331)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (331)
.+.. ......... +..+..... ...... ..
T Consensus 240 -------------~~~~---~~~~~~~~~-~~~~~~~~~----------------------~~~~~~-----------~~ 269 (346)
T 3fcy_A 240 -------------VWDL---DLAKNAYQE-ITDYFRLFD----------------------PRHERE-----------NE 269 (346)
T ss_dssp -------------HHHT---TCCCGGGHH-HHHHHHHHC----------------------TTCTTH-----------HH
T ss_pred -------------Hhhc---cccccchHH-HHHHHHhcC----------------------CCcchH-----------HH
Confidence 0000 000000000 000000000 000000 00
Q ss_pred HHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCC-CCcEEEecCCCCCCCcCCchh
Q 020064 236 AFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWP-EADFKVVADAGHSANEPGIAA 314 (331)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~~~~ 314 (331)
.+.... ..+....+.++ ++|+|+++|++|.++|++.+..+.+.++ ++++++++++||... +
T Consensus 270 ~~~~~~------------~~d~~~~~~~i-~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-----~ 331 (346)
T 3fcy_A 270 VFTKLG------------YIDVKNLAKRI-KGDVLMCVGLMDQVCPPSTVFAAYNNIQSKKDIKVYPDYGHEPM-----R 331 (346)
T ss_dssp HHHHHG------------GGCHHHHGGGC-CSEEEEEEETTCSSSCHHHHHHHHTTCCSSEEEEEETTCCSSCC-----T
T ss_pred HHHHhC------------cccHHHHHHhc-CCCEEEEeeCCCCcCCHHHHHHHHHhcCCCcEEEEeCCCCCcCH-----H
Confidence 000000 22345567788 5999999999999999999999999887 689999999999997 4
Q ss_pred HHHHHHHHHHHhhh
Q 020064 315 ELVATNEKLKNLIK 328 (331)
Q Consensus 315 ~~~~~i~~fl~~~~ 328 (331)
++.+.+.+||+++.
T Consensus 332 ~~~~~i~~fl~~l~ 345 (346)
T 3fcy_A 332 GFGDLAMQFMLELY 345 (346)
T ss_dssp THHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhh
Confidence 56888999998764
|
| >2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-29 Score=194.02 Aligned_cols=199 Identities=16% Similarity=0.097 Sum_probs=153.7
Q ss_pred CccceeEeCCCceEEEEeCCCC-CCCcEEEeccCCCCCCCC---CcccccCCCCcEEEEecCCCCCCCCCCCC--CCccc
Q 020064 22 YSTGILKVSDIHTIYWEQSGNP-TGHPVVFLHGGPGGGTTP---SNRRFFDPDFYRIILFDQRGAGKSTPHAC--LDQNT 95 (331)
Q Consensus 22 ~~~~~~~~~~g~~l~~~~~g~~-~~~~vl~~HG~~~~~~~~---~~~~~~~~~g~~vi~~D~~G~G~s~~~~~--~~~~~ 95 (331)
.+...+.. +|.++.+....+. +.|+||++||++++...+ .....+.++||.|+++|+||+|.|..... ....+
T Consensus 12 ~~~~~~~~-~g~~l~~~~~~p~~~~p~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~~ 90 (223)
T 2o2g_A 12 EYAVSVSV-GEVKLKGNLVIPNGATGIVLFAHGSGSSRYSPRNRYVAEVLQQAGLATLLIDLLTQEEEEIDLRTRHLRFD 90 (223)
T ss_dssp EEEEEEEE-TTEEEEEEEECCTTCCEEEEEECCTTCCTTCHHHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHCSSTTC
T ss_pred eeEEEEec-CCeEEEEEEecCCCCceEEEEecCCCCCCCccchHHHHHHHHHCCCEEEEEcCCCcCCCCccchhhcccCc
Confidence 34455555 6668887766543 467899999987665432 35566667899999999999998864321 01267
Q ss_pred hHHHHHHHHHHHHHhCCC------cEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhh
Q 020064 96 TWDLIDDIEKLRQHLEIP------EWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDA 169 (331)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~------~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (331)
.+++++|+.++++.+..+ +++++|||+||.+++.++..+|++++++|++++....
T Consensus 91 ~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~------------------- 151 (223)
T 2o2g_A 91 IGLLASRLVGATDWLTHNPDTQHLKVGYFGASTGGGAALVAAAERPETVQAVVSRGGRPDL------------------- 151 (223)
T ss_dssp HHHHHHHHHHHHHHHHHCTTTTTSEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCGGG-------------------
T ss_pred HHHHHHHHHHHHHHHHhCcCCCCCcEEEEEeCccHHHHHHHHHhCCCceEEEEEeCCCCCc-------------------
Confidence 888999999998887533 8999999999999999999999999999999874210
Q ss_pred HHhhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccC
Q 020064 170 WESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKG 249 (331)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (331)
T Consensus 152 -------------------------------------------------------------------------------- 151 (223)
T 2o2g_A 152 -------------------------------------------------------------------------------- 151 (223)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhhh
Q 020064 250 FFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNLIK 328 (331)
Q Consensus 250 ~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~ 328 (331)
....+.++ ++|+++++|++|.++|.+..+.+.+..++.++++++++||.+..+..++++.+.+.+|+++..
T Consensus 152 -------~~~~~~~~-~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 222 (223)
T 2o2g_A 152 -------APSALPHV-KAPTLLIVGGYDLPVIAMNEDALEQLQTSKRLVIIPRASHLFEEPGALTAVAQLASEWFMHYL 222 (223)
T ss_dssp -------CTTTGGGC-CSCEEEEEETTCHHHHHHHHHHHHHCCSSEEEEEETTCCTTCCSTTHHHHHHHHHHHHHHHHC
T ss_pred -------CHHHHhcC-CCCEEEEEccccCCCCHHHHHHHHhhCCCeEEEEeCCCCcccCChHHHHHHHHHHHHHHHHhc
Confidence 00134456 599999999999999876666666666889999999999998764458999999999998754
|
| >1qlw_A Esterase; anisotropic refinement, atomic resolution, alpha/beta hydrolase; 1.09A {Alcaligenes SP} SCOP: c.69.1.15 PDB: 2wkw_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-28 Score=198.87 Aligned_cols=187 Identities=14% Similarity=0.106 Sum_probs=143.6
Q ss_pred eEEEEeCCCCCCCcEEEeccCCCCCCCCC--------cccccCCCCcEEEEecCCCCCCCCCCCCCCc------------
Q 020064 34 TIYWEQSGNPTGHPVVFLHGGPGGGTTPS--------NRRFFDPDFYRIILFDQRGAGKSTPHACLDQ------------ 93 (331)
Q Consensus 34 ~l~~~~~g~~~~~~vl~~HG~~~~~~~~~--------~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~------------ 93 (331)
.+.|...+...+++|||+||++.+...|. ++..++++||.|+++|+||||.|........
T Consensus 51 ~~~~~~p~~~~~~~vvl~HG~g~~~~~~~~~pdg~~~~~~~l~~~G~~V~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~ 130 (328)
T 1qlw_A 51 YVRYQIPQRAKRYPITLIHGCCLTGMTWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATDISAINAVKLGKAPASSL 130 (328)
T ss_dssp EEEEEEETTCCSSCEEEECCTTCCGGGGSSCTTSCCCHHHHHHHTTCCEEEEECTTSTTSCCCCHHHHHHHTTSSCGGGS
T ss_pred EEEEEccCCCCCccEEEEeCCCCCCCccccCCCCchHHHHHHHHCCCeEEEECCCCcccCCCCCcccccccccccCcccc
Confidence 33444444435688999999776655443 6777778999999999999999986531100
Q ss_pred ----------------c----------------chHH------------------HHHHHHHHHHHhCCCcEEEEEeChh
Q 020064 94 ----------------N----------------TTWD------------------LIDDIEKLRQHLEIPEWQVFGGSWG 123 (331)
Q Consensus 94 ----------------~----------------~~~~------------------~~~~~~~~~~~~~~~~v~lvG~S~G 123 (331)
+ .+++ +++++..+++.++ +++++|||+|
T Consensus 131 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~--~~~lvGhS~G 208 (328)
T 1qlw_A 131 PDLFAAGHEAAWAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDWLGSMPTPNPTVANLSKLAIKLD--GTVLLSHSQS 208 (328)
T ss_dssp CCCBCCCHHHHHHHTTSSSBTTBCCTTCCSCGGGHHHHHHHCCCBCGGGSCSSCHHHHHHHHHHHHHT--SEEEEEEGGG
T ss_pred cceeccchhhhhhHhhhcccCCccCcCccCCHHHHHHHHHHhCccccccCCChhHHHHHHHHHHHHhC--CceEEEECcc
Confidence 0 0333 7888888888886 8999999999
Q ss_pred HHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhccccCCCchHHHHH
Q 020064 124 STLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYA 203 (331)
Q Consensus 124 g~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (331)
|.+++.+|..+|++++++|+++|....
T Consensus 209 G~~a~~~a~~~p~~v~~~v~~~p~~~~----------------------------------------------------- 235 (328)
T 1qlw_A 209 GIYPFQTAAMNPKGITAIVSVEPGECP----------------------------------------------------- 235 (328)
T ss_dssp TTHHHHHHHHCCTTEEEEEEESCSCCC-----------------------------------------------------
T ss_pred cHHHHHHHHhChhheeEEEEeCCCCCC-----------------------------------------------------
Confidence 999999999999999999999873200
Q ss_pred HHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCCCccCC-
Q 020064 204 AARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPM- 282 (331)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~- 282 (331)
. .......+ ++|+|+++|++|.++|+
T Consensus 236 --------------------------------------------------~--~~~~~~~~-~~PvLii~G~~D~~~p~~ 262 (328)
T 1qlw_A 236 --------------------------------------------------K--PEDVKPLT-SIPVLVVFGDHIEEFPRW 262 (328)
T ss_dssp --------------------------------------------------C--GGGCGGGT-TSCEEEEECSSCTTCTTT
T ss_pred --------------------------------------------------C--HHHHhhcc-CCCEEEEeccCCccccch
Confidence 0 00011123 59999999999999997
Q ss_pred ----cchHHHHHhCC----CCcEEEecCCC-----CCCCcCCchhHHHHHHHHHHHhhh
Q 020064 283 ----MSAWDLHKAWP----EADFKVVADAG-----HSANEPGIAAELVATNEKLKNLIK 328 (331)
Q Consensus 283 ----~~~~~~~~~~~----~~~~~~~~~~g-----H~~~~~~~~~~~~~~i~~fl~~~~ 328 (331)
+.++.+.+.++ ++++++++++| |+++.+..++++.+.|.+||++..
T Consensus 263 ~~~~~~~~~~~~~l~~~g~~~~~~~~~~~gi~G~~H~~~~~~~~~~~~~~i~~fl~~~~ 321 (328)
T 1qlw_A 263 APRLKACHAFIDALNAAGGKGQLMSLPALGVHGNSHMMMQDRNNLQVADLILDWIGRNT 321 (328)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEEGGGGTCCCCCTTGGGSTTHHHHHHHHHHHHHHTC
T ss_pred hhHHHHHHHHHHHHHHhCCCceEEEcCCCCcCCCcccchhccCHHHHHHHHHHHHHhcc
Confidence 88888888875 78999999666 999888668999999999998764
|
| >1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.7e-28 Score=189.56 Aligned_cols=212 Identities=15% Similarity=0.055 Sum_probs=149.5
Q ss_pred cceeEeCCCceE-EEEeCCCCCCCcEEEeccCCCCC-CCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCc--------
Q 020064 24 TGILKVSDIHTI-YWEQSGNPTGHPVVFLHGGPGGG-TTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQ-------- 93 (331)
Q Consensus 24 ~~~~~~~~g~~l-~~~~~g~~~~~~vl~~HG~~~~~-~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~-------- 93 (331)
..+++..+. .+ .|...+ ++|+||++||++++. .+...+..+.+.||.|+++|+||+|.|........
T Consensus 5 ~~~~~~~g~-~~~~~~~~~--~~~~vv~~hG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~ 81 (238)
T 1ufo_A 5 TERLTLAGL-SVLARIPEA--PKALLLALHGLQGSKEHILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPRYVEEV 81 (238)
T ss_dssp EEEEEETTE-EEEEEEESS--CCEEEEEECCTTCCHHHHHHTSTTTGGGTEEEEECCCTTSTTSSCCCCCTTSTTHHHHH
T ss_pred ecccccCCE-EEEEEecCC--CccEEEEECCCcccchHHHHHHHHHHhCCCEEEEecCCCCccCCCCCCcccccchhhhH
Confidence 344555444 55 444544 688999999977664 34556666777899999999999999976442111
Q ss_pred -cchHHHHHHHHHHHHHh---CCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhh
Q 020064 94 -NTTWDLIDDIEKLRQHL---EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDA 169 (331)
Q Consensus 94 -~~~~~~~~~~~~~~~~~---~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (331)
.++++.++|+.++++.+ +.++++++|||+||.+++.++..+|+.+.+++++++....... ...
T Consensus 82 ~~~~~~~~~d~~~~~~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~-------------~~~ 148 (238)
T 1ufo_A 82 YRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSGFPMKLP-------------QGQ 148 (238)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEETHHHHHHHHHHHTTCCCSCEEEESCCSSCCCCC-------------TTC
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCcEEEEEEChHHHHHHHHHHhccCcceEEEEecCCccchhh-------------hhh
Confidence 13667788888877765 4479999999999999999999999999999998875432100 000
Q ss_pred HHhhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccC
Q 020064 170 WESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKG 249 (331)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (331)
. ..+ .. ...+.
T Consensus 149 ----~-------------------~~~-~~----------------------------------~~~~~----------- 159 (238)
T 1ufo_A 149 ----V-------------------VED-PG----------------------------------VLALY----------- 159 (238)
T ss_dssp ----C-------------------CCC-HH----------------------------------HHHHH-----------
T ss_pred ----c-------------------cCC-cc----------------------------------cchhh-----------
Confidence 0 000 00 00000
Q ss_pred CCCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCC------CCcEEEecCCCCCCCcCCchhHHHHHHHHH
Q 020064 250 FFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWP------EADFKVVADAGHSANEPGIAAELVATNEKL 323 (331)
Q Consensus 250 ~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~------~~~~~~~~~~gH~~~~~~~~~~~~~~i~~f 323 (331)
..+....+.++.++|+++++|++|.++|.+.++.+.+.++ ++++++++++||.++.+. ++++.+.|.+|
T Consensus 160 ----~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~-~~~~~~~l~~~ 234 (238)
T 1ufo_A 160 ----QAPPATRGEAYGGVPLLHLHGSRDHIVPLARMEKTLEALRPHYPEGRLARFVEEGAGHTLTPLM-ARVGLAFLEHW 234 (238)
T ss_dssp ----HSCGGGCGGGGTTCCEEEEEETTCTTTTHHHHHHHHHHHGGGCTTCCEEEEEETTCCSSCCHHH-HHHHHHHHHHH
T ss_pred ----cCChhhhhhhccCCcEEEEECCCCCccCcHHHHHHHHHHhhcCCCCceEEEEeCCCCcccHHHH-HHHHHHHHHHH
Confidence 1122234555523999999999999999999999999888 889999999999998775 77777777777
Q ss_pred HH
Q 020064 324 KN 325 (331)
Q Consensus 324 l~ 325 (331)
++
T Consensus 235 l~ 236 (238)
T 1ufo_A 235 LE 236 (238)
T ss_dssp HH
T ss_pred Hh
Confidence 65
|
| >3qmv_A Thioesterase, REDJ; alpha/beta hydrolase fold, hydrolase; 2.12A {Streptomyces coelicolor} PDB: 3qmw_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3e-29 Score=198.69 Aligned_cols=220 Identities=10% Similarity=0.002 Sum_probs=140.5
Q ss_pred CcEEEeccCCCCCCC-CCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHh-CCCcEEEEEeChh
Q 020064 46 HPVVFLHGGPGGGTT-PSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHL-EIPEWQVFGGSWG 123 (331)
Q Consensus 46 ~~vl~~HG~~~~~~~-~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~lvG~S~G 123 (331)
++|||+||++++... ..++..+ ..||+|+++|+||||.|.... ..++++++++++.++++.+ +.++++|+|||||
T Consensus 52 ~~lvllHG~~~~~~~~~~l~~~L-~~~~~v~~~D~~G~G~S~~~~--~~~~~~~~a~~~~~~l~~~~~~~~~~lvG~S~G 128 (280)
T 3qmv_A 52 LRLVCFPYAGGTVSAFRGWQERL-GDEVAVVPVQLPGRGLRLRER--PYDTMEPLAEAVADALEEHRLTHDYALFGHSMG 128 (280)
T ss_dssp EEEEEECCTTCCGGGGTTHHHHH-CTTEEEEECCCTTSGGGTTSC--CCCSHHHHHHHHHHHHHHTTCSSSEEEEEETHH
T ss_pred ceEEEECCCCCChHHHHHHHHhc-CCCceEEEEeCCCCCCCCCCC--CCCCHHHHHHHHHHHHHHhCCCCCEEEEEeCHh
Confidence 679999997776554 4455555 459999999999999997664 4678999999999999999 7789999999999
Q ss_pred HHHHHHHHHhCCCcee----eEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhccccCCCchH
Q 020064 124 STLALAYSLAHPDKVT----GLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKE 199 (331)
Q Consensus 124 g~~a~~~a~~~p~~v~----~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (331)
|.+++.+|.++|+++. +++++++.......... ............+..+. ...
T Consensus 129 g~va~~~a~~~p~~~~~~~~~l~l~~~~~p~~~~~~~-----------------~~~~~~~~~~~~~~~~~----~~~-- 185 (280)
T 3qmv_A 129 ALLAYEVACVLRRRGAPRPRHLFVSGSRAPHLYGDRA-----------------DHTLSDTALREVIRDLG----GLD-- 185 (280)
T ss_dssp HHHHHHHHHHHHHTTCCCCSCEEEESCCCGGGCSCCC-----------------GGGSCHHHHHHHHHHHT----CCC--
T ss_pred HHHHHHHHHHHHHcCCCCceEEEEECCCCCCCcCccc-----------------ccccCHHHHHHHHHHhC----CCC--
Confidence 9999999999998776 78877764432110000 00000000000000000 000
Q ss_pred HHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCCCc
Q 020064 200 TQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVC 279 (331)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~ 279 (331)
......+... ......+...+.... .. ....+..+ ++|+|+|+|++|.+
T Consensus 186 ----------------~~~~~~~~~~-~~~~~~~~~~~~~~~------------~~-~~~~~~~i-~~P~l~i~G~~D~~ 234 (280)
T 3qmv_A 186 ----------------DADTLGAAYF-DRRLPVLRADLRACE------------RY-DWHPRPPL-DCPTTAFSAAADPI 234 (280)
T ss_dssp -------------------------C-CTTHHHHHHHHHHHH------------TC-CCCCCCCB-CSCEEEEEEEECSS
T ss_pred ----------------hhhhcCHHHH-HHHHHHHHHHHHHHH------------hc-cccCCCce-ecCeEEEEecCCCC
Confidence 0000000000 000000111110000 00 01125677 59999999999999
Q ss_pred cCCcchHHHHHhCCCC-cEEEecCCCCCCCc--CCchhHHHHHHHHHH
Q 020064 280 CPMMSAWDLHKAWPEA-DFKVVADAGHSANE--PGIAAELVATNEKLK 324 (331)
Q Consensus 280 ~~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~--~~~~~~~~~~i~~fl 324 (331)
++++..+.+.+.+++. ++++++ +||+.+. ++ ++++.+.|.+||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~-ggH~~~~~~~~-~~~~~~~i~~~L 280 (280)
T 3qmv_A 235 ATPEMVEAWRPYTTGSFLRRHLP-GNHFFLNGGPS-RDRLLAHLGTEL 280 (280)
T ss_dssp SCHHHHHTTGGGBSSCEEEEEEE-EETTGGGSSHH-HHHHHHHHHTTC
T ss_pred cChHHHHHHHHhcCCceEEEEec-CCCeEEcCchh-HHHHHHHHHhhC
Confidence 9999888898888764 666676 6999988 64 999999998874
|
| >2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein, BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics, PSI-2; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=4.3e-28 Score=181.35 Aligned_cols=178 Identities=13% Similarity=0.110 Sum_probs=132.3
Q ss_pred CCCcEEEeccCCCCC---C-CCC-cccccCCC-CcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCC-CcEE
Q 020064 44 TGHPVVFLHGGPGGG---T-TPS-NRRFFDPD-FYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEI-PEWQ 116 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~---~-~~~-~~~~~~~~-g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~ 116 (331)
+.|+|||+||++++. . |.. ....+.+. ||+|+++|+||++. .++.+++..+++.++. ++++
T Consensus 3 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~d~~g~~~------------~~~~~~~~~~~~~l~~~~~~~ 70 (194)
T 2qs9_A 3 SPSKAVIVPGNGGGDVTTHGWYGWVKKELEKIPGFQCLAKNMPDPIT------------ARESIWLPFMETELHCDEKTI 70 (194)
T ss_dssp CCCEEEEECCSSSSCTTTSTTHHHHHHHHTTSTTCCEEECCCSSTTT------------CCHHHHHHHHHHTSCCCTTEE
T ss_pred CCCEEEEECCCCCCCcccchHHHHHHHHHhhccCceEEEeeCCCCCc------------ccHHHHHHHHHHHhCcCCCEE
Confidence 468899999977663 2 434 45556555 99999999998631 1356778888899998 8999
Q ss_pred EEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhccccCCC
Q 020064 117 VFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSD 196 (331)
Q Consensus 117 lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (331)
++||||||.+++.+|.++| ++++|+++++...... .. ...
T Consensus 71 lvG~S~Gg~ia~~~a~~~p--v~~lvl~~~~~~~~~~---------------~~----------------~~~------- 110 (194)
T 2qs9_A 71 IIGHSSGAIAAMRYAETHR--VYAIVLVSAYTSDLGD---------------EN----------------ERA------- 110 (194)
T ss_dssp EEEETHHHHHHHHHHHHSC--CSEEEEESCCSSCTTC---------------HH----------------HHH-------
T ss_pred EEEcCcHHHHHHHHHHhCC--CCEEEEEcCCccccch---------------hh----------------hHH-------
Confidence 9999999999999999999 9999999986532100 00 000
Q ss_pred chHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCC
Q 020064 197 DKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRY 276 (331)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~ 276 (331)
..+ . . .....+.+.++ .+|+++++|++
T Consensus 111 ---------~~~---------~-~---------------------------------~~~~~~~~~~~-~~p~lii~G~~ 137 (194)
T 2qs9_A 111 ---------SGY---------F-T---------------------------------RPWQWEKIKAN-CPYIVQFGSTD 137 (194)
T ss_dssp ---------TST---------T-S---------------------------------SCCCHHHHHHH-CSEEEEEEETT
T ss_pred ---------Hhh---------h-c---------------------------------ccccHHHHHhh-CCCEEEEEeCC
Confidence 000 0 0 00011233445 48999999999
Q ss_pred CCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhhhc
Q 020064 277 DVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNLIKN 329 (331)
Q Consensus 277 D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~~ 329 (331)
|.++|++.++.+.+.+ ++++++++++||+++.+. ++.+.+.+ +|+++..+
T Consensus 138 D~~vp~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~-p~~~~~~~-~fl~~~~~ 187 (194)
T 2qs9_A 138 DPFLPWKEQQEVADRL-ETKLHKFTDCGHFQNTEF-HELITVVK-SLLKVPAL 187 (194)
T ss_dssp CSSSCHHHHHHHHHHH-TCEEEEESSCTTSCSSCC-HHHHHHHH-HHHTCCCC
T ss_pred CCcCCHHHHHHHHHhc-CCeEEEeCCCCCccchhC-HHHHHHHH-HHHHhhhh
Confidence 9999999999999988 899999999999999886 88877665 89987643
|
| >1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16 | Back alignment and structure |
|---|
Probab=99.95 E-value=6.2e-28 Score=189.25 Aligned_cols=183 Identities=13% Similarity=0.109 Sum_probs=140.9
Q ss_pred CCceEEEEeCC-CCCCCcEEEeccCCCCC-CCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHH
Q 020064 31 DIHTIYWEQSG-NPTGHPVVFLHGGPGGG-TTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQ 108 (331)
Q Consensus 31 ~g~~l~~~~~g-~~~~~~vl~~HG~~~~~-~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~ 108 (331)
+|..++|...+ ..+.|+||++||++++. .+..+...+.++||.|+++|+||+|.+... ...++.+.+..+.+
T Consensus 39 ~~~~l~~p~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~~~~~------~~~d~~~~~~~l~~ 112 (262)
T 1jfr_A 39 GGGTIYYPTSTADGTFGAVVISPGFTAYQSSIAWLGPRLASQGFVVFTIDTNTTLDQPDS------RGRQLLSALDYLTQ 112 (262)
T ss_dssp CCEEEEEESCCTTCCEEEEEEECCTTCCGGGTTTHHHHHHTTTCEEEEECCSSTTCCHHH------HHHHHHHHHHHHHH
T ss_pred CceeEEecCCCCCCCCCEEEEeCCcCCCchhHHHHHHHHHhCCCEEEEeCCCCCCCCCch------hHHHHHHHHHHHHh
Confidence 44688887763 33567899999976664 445566677788999999999999976421 12233333333332
Q ss_pred ------HhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchh
Q 020064 109 ------HLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENER 182 (331)
Q Consensus 109 ------~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (331)
.++.++++++|||+||.+++.++.++|+ ++++|++++...
T Consensus 113 ~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~p~~~--------------------------------- 158 (262)
T 1jfr_A 113 RSSVRTRVDATRLGVMGHSMGGGGSLEAAKSRTS-LKAAIPLTGWNT--------------------------------- 158 (262)
T ss_dssp TSTTGGGEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEESCCCS---------------------------------
T ss_pred ccccccccCcccEEEEEEChhHHHHHHHHhcCcc-ceEEEeecccCc---------------------------------
Confidence 4556789999999999999999999997 999999886321
Q ss_pred hhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhcc
Q 020064 183 SCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNID 262 (331)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 262 (331)
...+.
T Consensus 159 ---------------------------------------------------------------------------~~~~~ 163 (262)
T 1jfr_A 159 ---------------------------------------------------------------------------DKTWP 163 (262)
T ss_dssp ---------------------------------------------------------------------------CCCCT
T ss_pred ---------------------------------------------------------------------------ccccc
Confidence 01244
Q ss_pred ccccccEEEEecCCCCccCCcc-hHHHHHhCCC---CcEEEecCCCCCCCcCCchhHHHHHHHHHHHhhhcC
Q 020064 263 NIRHINATIVQGRYDVCCPMMS-AWDLHKAWPE---ADFKVVADAGHSANEPGIAAELVATNEKLKNLIKNG 330 (331)
Q Consensus 263 ~i~~~P~l~i~G~~D~~~~~~~-~~~~~~~~~~---~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~~~ 330 (331)
++ ++|+|+++|++|.+++++. ++.+.+.+++ .++++++++||..+.+. ++++.+.+.+||++..++
T Consensus 164 ~~-~~P~l~i~G~~D~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~H~~~~~~-~~~~~~~i~~fl~~~l~~ 233 (262)
T 1jfr_A 164 EL-RTPTLVVGADGDTVAPVATHSKPFYESLPGSLDKAYLELRGASHFTPNTS-DTTIAKYSISWLKRFIDS 233 (262)
T ss_dssp TC-CSCEEEEEETTCSSSCTTTTHHHHHHHSCTTSCEEEEEETTCCTTGGGSC-CHHHHHHHHHHHHHHHSC
T ss_pred cc-CCCEEEEecCccccCCchhhHHHHHHHhhcCCCceEEEeCCCCcCCcccc-hHHHHHHHHHHHHHHhcC
Confidence 56 5999999999999999998 9999999865 38999999999999886 899999999999887543
|
| >1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=4.7e-28 Score=187.01 Aligned_cols=199 Identities=16% Similarity=0.033 Sum_probs=152.3
Q ss_pred ccceeEeCCCceEEEEeCCCC--CCCcEEEeccCCCCCC-CCCcccccCCCCcEEEEecCCCCCCCCCCCCC--------
Q 020064 23 STGILKVSDIHTIYWEQSGNP--TGHPVVFLHGGPGGGT-TPSNRRFFDPDFYRIILFDQRGAGKSTPHACL-------- 91 (331)
Q Consensus 23 ~~~~~~~~~g~~l~~~~~g~~--~~~~vl~~HG~~~~~~-~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~-------- 91 (331)
+...+.+.+|.++.+....++ +.|+||++||++++.. +..++..+.+.||.|+++|+||+|.|......
T Consensus 4 ~~~~~~~~~g~~l~~~~~~p~~~~~p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~ 83 (236)
T 1zi8_A 4 EGISIQSYDGHTFGALVGSPAKAPAPVIVIAQDIFGVNAFMRETVSWLVDQGYAAVCPDLYARQAPGTALDPQDERQREQ 83 (236)
T ss_dssp TTCCEECTTSCEECEEEECCSSCSEEEEEEECCTTBSCHHHHHHHHHHHHTTCEEEEECGGGGTSTTCBCCTTCHHHHHH
T ss_pred ceEEEecCCCCeEEEEEECCCCCCCCEEEEEcCCCCCCHHHHHHHHHHHhCCcEEEeccccccCCCcccccccchhhhhh
Confidence 345667778877877666543 3467999999766544 44556666678999999999999988753211
Q ss_pred -----CccchHHHHHHHHHHHHHhC-----CCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcc
Q 020064 92 -----DQNTTWDLIDDIEKLRQHLE-----IPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGG 161 (331)
Q Consensus 92 -----~~~~~~~~~~~~~~~~~~~~-----~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~ 161 (331)
...+.+..++|+.++++.+. .++++++|||+||.+++.++..+| +++++++.+....
T Consensus 84 ~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~--~~~~v~~~~~~~~----------- 150 (236)
T 1zi8_A 84 AYKLWQAFDMEAGVGDLEAAIRYARHQPYSNGKVGLVGYSLGGALAFLVASKGY--VDRAVGYYGVGLE----------- 150 (236)
T ss_dssp HHHHHHHCCHHHHHHHHHHHHHHHTSSTTEEEEEEEEEETHHHHHHHHHHHHTC--SSEEEEESCSSGG-----------
T ss_pred hhhhhhccCcchhhHHHHHHHHHHHhccCCCCCEEEEEECcCHHHHHHHhccCC--ccEEEEecCcccc-----------
Confidence 13456778899999999886 468999999999999999999998 8888887653210
Q ss_pred cccCChhhHHhhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhh
Q 020064 162 AAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIE 241 (331)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (331)
T Consensus 151 -------------------------------------------------------------------------------- 150 (236)
T 1zi8_A 151 -------------------------------------------------------------------------------- 150 (236)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhhccCCCCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhC---CCCcEEEecCCCCCCCcCC-------
Q 020064 242 NHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAW---PEADFKVVADAGHSANEPG------- 311 (331)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~~~~------- 311 (331)
+....+.++ ++|+|+++|++|.++|++.++.+.+.+ +++++++++++||.+..+.
T Consensus 151 --------------~~~~~~~~~-~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~ 215 (236)
T 1zi8_A 151 --------------KQLNKVPEV-KHPALFHMGGQDHFVPAPSRQLITEGFGANPLLQVHWYEEAGHSFARTGSSGYVAS 215 (236)
T ss_dssp --------------GCGGGGGGC-CSCEEEEEETTCTTSCHHHHHHHHHHHTTCTTEEEEEETTCCTTTTCTTSTTCCHH
T ss_pred --------------cchhhhhhc-CCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCceEEEECCCCcccccCCCCccCHH
Confidence 011245566 599999999999999999999898887 5789999999999887653
Q ss_pred chhHHHHHHHHHHHhhhc
Q 020064 312 IAAELVATNEKLKNLIKN 329 (331)
Q Consensus 312 ~~~~~~~~i~~fl~~~~~ 329 (331)
..+++.+.+.+|+++..+
T Consensus 216 ~~~~~~~~i~~fl~~~l~ 233 (236)
T 1zi8_A 216 AAALANERTLDFLVPLQS 233 (236)
T ss_dssp HHHHHHHHHHHHHGGGCC
T ss_pred HHHHHHHHHHHHHHHhcC
Confidence 135789999999987654
|
| >3ils_A PKS, aflatoxin biosynthesis polyketide synthase; A/B hydrolase, thioesterase, norsolorinic acid, P polyketide, acyltransferase; 1.70A {Aspergillus parasiticus} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.4e-27 Score=184.96 Aligned_cols=220 Identities=12% Similarity=0.051 Sum_probs=140.3
Q ss_pred CCCCcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhC-CCcEEEEEeC
Q 020064 43 PTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLE-IPEWQVFGGS 121 (331)
Q Consensus 43 ~~~~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~lvG~S 121 (331)
..+++|||+||++++...|..... +..+|+|+++|+||+|.+... .++++++++++.++++.+. .++++|+|||
T Consensus 19 ~~~~~lv~lhg~~~~~~~~~~~~~-l~~~~~v~~~d~~G~~~~~~~----~~~~~~~~~~~~~~i~~~~~~~~~~l~GhS 93 (265)
T 3ils_A 19 VARKTLFMLPDGGGSAFSYASLPR-LKSDTAVVGLNCPYARDPENM----NCTHGAMIESFCNEIRRRQPRGPYHLGGWS 93 (265)
T ss_dssp TSSEEEEEECCTTCCGGGGTTSCC-CSSSEEEEEEECTTTTCGGGC----CCCHHHHHHHHHHHHHHHCSSCCEEEEEET
T ss_pred CCCCEEEEECCCCCCHHHHHHHHh-cCCCCEEEEEECCCCCCCCCC----CCCHHHHHHHHHHHHHHhCCCCCEEEEEEC
Confidence 356889999997776554444444 588999999999999766543 3689999999999999985 4689999999
Q ss_pred hhHHHHHHHHH---hCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhccccCCCch
Q 020064 122 WGSTLALAYSL---AHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDK 198 (331)
Q Consensus 122 ~Gg~~a~~~a~---~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (331)
|||.+++.+|. .+|++++++|++++....... ..+..... +...+.. .....
T Consensus 94 ~Gg~ia~~~a~~l~~~~~~v~~lvl~~~~~~~~~~-----------~~~~~~~~------------~~~~~~~-~~~~~- 148 (265)
T 3ils_A 94 SGGAFAYVVAEALVNQGEEVHSLIIIDAPIPQAME-----------QLPRAFYE------------HCNSIGL-FATQP- 148 (265)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEEEESCCSSCCCC-----------CCCHHHHH------------HHHHTTT-TTTSS-
T ss_pred HhHHHHHHHHHHHHhCCCCceEEEEEcCCCCCccc-----------ccCHHHHH------------HHHHHHH-hCCCc-
Confidence 99999999998 678889999999876532100 00000100 0000000 00000
Q ss_pred HHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEE-EEecCC-
Q 020064 199 ETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINAT-IVQGRY- 276 (331)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l-~i~G~~- 276 (331)
......+++ ........+...+.... .+ .......+ ++|++ +++|++
T Consensus 149 ----------------~~~~~~~~~-~~~~~~~~~~~~~~~~~-------~~------~~~~~~~i-~~P~~lii~G~~~ 197 (265)
T 3ils_A 149 ----------------GASPDGSTE-PPSYLIPHFTAVVDVML-------DY------KLAPLHAR-RMPKVGIVWAADT 197 (265)
T ss_dssp ----------------SSCSSSCSC-CCTTHHHHHHHHHHHTT-------TC------CCCCCCCS-SCCEEEEEEEEEC
T ss_pred ----------------cccccCCHH-HHHHHHHHHHHHHHHHH-------hc------CCCCCccC-CCCeEEEEEccCC
Confidence 000000000 00000000111111000 00 00123467 59988 999999
Q ss_pred --CCcc--------------CCcchHHHHHhCC--CCcEEEecCCCCCCC--cCCchhHHHHHHHHHH
Q 020064 277 --DVCC--------------PMMSAWDLHKAWP--EADFKVVADAGHSAN--EPGIAAELVATNEKLK 324 (331)
Q Consensus 277 --D~~~--------------~~~~~~~~~~~~~--~~~~~~~~~~gH~~~--~~~~~~~~~~~i~~fl 324 (331)
|..+ +......+.+..+ ++++++++|+||+.+ .++ ++++.+.|.+||
T Consensus 198 ~~D~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~i~gagH~~~~~~e~-~~~v~~~i~~fL 264 (265)
T 3ils_A 198 VMDERDAPKMKGMHFMIQKRTEFGPDGWDTIMPGASFDIVRADGANHFTLMQKEH-VSIISDLIDRVM 264 (265)
T ss_dssp SSCTTTSCCCSSCCTTTSCCCCCSCTTHHHHSTTCCEEEEEEEEEETTGGGSTTT-THHHHHHHHHHT
T ss_pred CCccccCccccCcchhhccccccCcchHHHhCCccceeEEEcCCCCcceeeChhh-HHHHHHHHHHHh
Confidence 9988 4555567777766 789999999999998 776 999999999997
|
| >1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A | Back alignment and structure |
|---|
Probab=99.95 E-value=3.7e-28 Score=179.56 Aligned_cols=170 Identities=16% Similarity=0.072 Sum_probs=135.4
Q ss_pred CCCcEEEeccCCCCCC-CCCcccccCCCCc---EEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCcEEEEE
Q 020064 44 TGHPVVFLHGGPGGGT-TPSNRRFFDPDFY---RIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFG 119 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~-~~~~~~~~~~~g~---~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG 119 (331)
++|+|||+||++++.. |..+...+.+.|| +|+++|+||+|.|. ..+.+++++++..+++.++.++++++|
T Consensus 2 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~G~~~~~v~~~d~~g~g~s~------~~~~~~~~~~~~~~~~~~~~~~~~lvG 75 (181)
T 1isp_A 2 EHNPVVMVHGIGGASFNFAGIKSYLVSQGWSRDKLYAVDFWDKTGTN------YNNGPVLSRFVQKVLDETGAKKVDIVA 75 (181)
T ss_dssp CCCCEEEECCTTCCGGGGHHHHHHHHHTTCCGGGEEECCCSCTTCCH------HHHHHHHHHHHHHHHHHHCCSCEEEEE
T ss_pred CCCeEEEECCcCCCHhHHHHHHHHHHHcCCCCccEEEEecCCCCCch------hhhHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 5788999999766644 4455666667887 79999999999885 357789999999999999999999999
Q ss_pred eChhHHHHHHHHHhC--CCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhccccCCCc
Q 020064 120 GSWGSTLALAYSLAH--PDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDD 197 (331)
Q Consensus 120 ~S~Gg~~a~~~a~~~--p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (331)
|||||.+++.++.++ |++++++|+++++...... ..+.
T Consensus 76 ~S~Gg~~a~~~~~~~~~~~~v~~~v~~~~~~~~~~~-------------------------------------~~~~--- 115 (181)
T 1isp_A 76 HSMGGANTLYYIKNLDGGNKVANVVTLGGANRLTTG-------------------------------------KALP--- 115 (181)
T ss_dssp ETHHHHHHHHHHHHSSGGGTEEEEEEESCCGGGTCS-------------------------------------BCCC---
T ss_pred ECccHHHHHHHHHhcCCCceEEEEEEEcCccccccc-------------------------------------ccCC---
Confidence 999999999999998 8999999999986431100 0000
Q ss_pred hHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCC
Q 020064 198 KETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYD 277 (331)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D 277 (331)
. ..... ++|+++++|++|
T Consensus 116 --------------------------------------------------------~-----~~~~~-~~p~l~i~G~~D 133 (181)
T 1isp_A 116 --------------------------------------------------------G-----TDPNQ-KILYTSIYSSAD 133 (181)
T ss_dssp --------------------------------------------------------C-----SCTTC-CCEEEEEEETTC
T ss_pred --------------------------------------------------------C-----CCCcc-CCcEEEEecCCC
Confidence 0 00012 589999999999
Q ss_pred CccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhhh
Q 020064 278 VCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNLIK 328 (331)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~ 328 (331)
.++|++.+ .++++++++++++||+.+.+. + ++.+.|.+|+++..
T Consensus 134 ~~v~~~~~-----~~~~~~~~~~~~~gH~~~~~~-~-~~~~~i~~fl~~~~ 177 (181)
T 1isp_A 134 MIVMNYLS-----RLDGARNVQIHGVGHIGLLYS-S-QVNSLIKEGLNGGG 177 (181)
T ss_dssp SSSCHHHH-----CCBTSEEEEESSCCTGGGGGC-H-HHHHHHHHHHTTTC
T ss_pred cccccccc-----cCCCCcceeeccCchHhhccC-H-HHHHHHHHHHhccC
Confidence 99998643 378999999999999998886 6 79999999998753
|
| >3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.95 E-value=8.3e-28 Score=199.92 Aligned_cols=257 Identities=11% Similarity=0.070 Sum_probs=153.6
Q ss_pred CCccceeEeCCCceEE--EEeCCCCCCCcEEEeccCCCCCCCC-Ccc-cccCCCCcEEEEecCCCCCCCCCCCCCCccch
Q 020064 21 PYSTGILKVSDIHTIY--WEQSGNPTGHPVVFLHGGPGGGTTP-SNR-RFFDPDFYRIILFDQRGAGKSTPHACLDQNTT 96 (331)
Q Consensus 21 ~~~~~~~~~~~g~~l~--~~~~g~~~~~~vl~~HG~~~~~~~~-~~~-~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~ 96 (331)
+.+...+...+ .++. +...+.+..|+||++||++++...+ ... ..+++.||+|+++|+||+|.|..... .. .
T Consensus 134 ~~~~~~i~~~~-~~l~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~--~~-~ 209 (405)
T 3fnb_A 134 PLKSIEVPFEG-ELLPGYAIISEDKAQDTLIVVGGGDTSREDLFYMLGYSGWEHDYNVLMVDLPGQGKNPNQGL--HF-E 209 (405)
T ss_dssp CCEEEEEEETT-EEEEEEEECCSSSCCCEEEEECCSSCCHHHHHHHTHHHHHHTTCEEEEECCTTSTTGGGGTC--CC-C
T ss_pred CcEEEEEeECC-eEEEEEEEcCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHhCCcEEEEEcCCCCcCCCCCCC--CC-C
Confidence 34555666644 4664 3344444458999999987664443 223 25557899999999999999964331 12 2
Q ss_pred HHHHHHHHHHHHHhCC--CcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhh
Q 020064 97 WDLIDDIEKLRQHLEI--PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFR 174 (331)
Q Consensus 97 ~~~~~~~~~~~~~~~~--~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (331)
.++.+|+..+++.+.. ++++++|||+||.+++.+|..+| +++++|+++|.............. ..
T Consensus 210 ~~~~~d~~~~~~~l~~~~~~v~l~G~S~GG~~a~~~a~~~p-~v~~~v~~~p~~~~~~~~~~~~~~--~~---------- 276 (405)
T 3fnb_A 210 VDARAAISAILDWYQAPTEKIAIAGFSGGGYFTAQAVEKDK-RIKAWIASTPIYDVAEVFRISFST--AL---------- 276 (405)
T ss_dssp SCTHHHHHHHHHHCCCSSSCEEEEEETTHHHHHHHHHTTCT-TCCEEEEESCCSCHHHHHHHHCC---------------
T ss_pred ccHHHHHHHHHHHHHhcCCCEEEEEEChhHHHHHHHHhcCc-CeEEEEEecCcCCHHHHHHHhhhh--hh----------
Confidence 2558888888888876 79999999999999999999999 899999999877543221110000 00
Q ss_pred ccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCc
Q 020064 175 DLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSD 254 (331)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (331)
..+. .....+............. ..... .+ ...... ....+.... .
T Consensus 277 -~~p~----~~~~~~~~~~~~~~~~~~~-~~~~~-~~----~~~~~~-----------~~~~~~~~~------------~ 322 (405)
T 3fnb_A 277 -KAPK----TILKWGSKLVTSVNKVAEV-NLNKY-AW----QFGQVD-----------FITSVNEVL------------E 322 (405)
T ss_dssp --------------------CCCHHHHH-HHHHH-HH----HHTSSS-----------HHHHHHHHH------------H
T ss_pred -hCcH----HHHHHHHHHhhccchhHHH-HHHHh-hh----hcCCCC-----------HHHHHHHHH------------H
Confidence 0000 0000000000000000000 00000 00 000000 000000000 0
Q ss_pred chhhhhccccccccEEEEecCCCCccCCcchHHHHHhCC----CCcEEEe---cCCCCCCCcCCchhHHHHHHHHHHHhh
Q 020064 255 SFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWP----EADFKVV---ADAGHSANEPGIAAELVATNEKLKNLI 327 (331)
Q Consensus 255 ~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~----~~~~~~~---~~~gH~~~~~~~~~~~~~~i~~fl~~~ 327 (331)
......+.++ ++|+|+++|++|.++|++.++.+.+.++ +++++++ +++||..+.+. ++.+.+.|.+||++.
T Consensus 323 ~~~~~~l~~i-~~PvLii~G~~D~~v~~~~~~~l~~~l~~~~~~~~l~~~~~~~h~gh~~~~~~-~~~~~~~i~~fL~~~ 400 (405)
T 3fnb_A 323 QAQIVDYNKI-DVPSLFLVGAGEDSELMRQSQVLYDNFKQRGIDVTLRKFSSESGADAHCQVNN-FRLMHYQVFEWLNHI 400 (405)
T ss_dssp HCCCCCGGGC-CSCEEEEEETTSCHHHHHHHHHHHHHHHHTTCCEEEEEECTTTTCCSGGGGGG-HHHHHHHHHHHHHHH
T ss_pred hhcccCHhhC-CCCEEEEecCCCcCCChHHHHHHHHHhccCCCCceEEEEcCCccchhccccch-HHHHHHHHHHHHHHH
Confidence 0011126788 5999999999999999999999988885 4569999 55666666775 999999999999987
Q ss_pred hcC
Q 020064 328 KNG 330 (331)
Q Consensus 328 ~~~ 330 (331)
.++
T Consensus 401 l~~ 403 (405)
T 3fnb_A 401 FKK 403 (405)
T ss_dssp HC-
T ss_pred hCc
Confidence 643
|
| >1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31 | Back alignment and structure |
|---|
Probab=99.95 E-value=3.1e-27 Score=176.40 Aligned_cols=178 Identities=14% Similarity=0.111 Sum_probs=134.0
Q ss_pred CCcEEEeccCCCCCC--CCCccc-ccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCcEEEEEeC
Q 020064 45 GHPVVFLHGGPGGGT--TPSNRR-FFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGS 121 (331)
Q Consensus 45 ~~~vl~~HG~~~~~~--~~~~~~-~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG~S 121 (331)
.|+||++||++++.. |..... .+.++||+|+++|+| .|.. .+.+++++++..+++.+ .++++++|||
T Consensus 4 ~p~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~---~~~~------~~~~~~~~~~~~~~~~~-~~~~~l~G~S 73 (192)
T 1uxo_A 4 TKQVYIIHGYRASSTNHWFPWLKKRLLADGVQADILNMP---NPLQ------PRLEDWLDTLSLYQHTL-HENTYLVAHS 73 (192)
T ss_dssp CCEEEEECCTTCCTTSTTHHHHHHHHHHTTCEEEEECCS---CTTS------CCHHHHHHHHHTTGGGC-CTTEEEEEET
T ss_pred CCEEEEEcCCCCCcchhHHHHHHHHHHhCCcEEEEecCC---CCCC------CCHHHHHHHHHHHHHhc-cCCEEEEEeC
Confidence 355999999777654 444443 355789999999999 2221 26889999999999998 7899999999
Q ss_pred hhHHHHHHHHHhCCC--ceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhccccCCCchH
Q 020064 122 WGSTLALAYSLAHPD--KVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKE 199 (331)
Q Consensus 122 ~Gg~~a~~~a~~~p~--~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (331)
|||.+++.+|.++|+ +++++|++++....... + . . ...+..
T Consensus 74 ~Gg~~a~~~a~~~~~~~~v~~~v~~~~~~~~~~~----------------~-------~-----~-~~~~~~-------- 116 (192)
T 1uxo_A 74 LGCPAILRFLEHLQLRAALGGIILVSGFAKSLPT----------------L-------Q-----M-LDEFTQ-------- 116 (192)
T ss_dssp THHHHHHHHHHTCCCSSCEEEEEEETCCSSCCTT----------------C-------G-----G-GGGGTC--------
T ss_pred ccHHHHHHHHHHhcccCCccEEEEeccCCCcccc----------------c-------h-----h-hhhhhh--------
Confidence 999999999999999 99999999986432100 0 0 0 000000
Q ss_pred HHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCCCc
Q 020064 200 TQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVC 279 (331)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~ 279 (331)
. ..+. ..+.++ ++|+|+++|++|.+
T Consensus 117 ---------------------~--------------------------------~~~~-~~~~~~-~~P~l~i~g~~D~~ 141 (192)
T 1uxo_A 117 ---------------------G--------------------------------SFDH-QKIIES-AKHRAVIASKDDQI 141 (192)
T ss_dssp ---------------------S--------------------------------CCCH-HHHHHH-EEEEEEEEETTCSS
T ss_pred ---------------------c--------------------------------CCCH-HHHHhh-cCCEEEEecCCCCc
Confidence 0 0011 345567 59999999999999
Q ss_pred cCCcchHHHHHhCCCCcEEEecCCCCCCCcCCch---hHHHHHHHHHHHh
Q 020064 280 CPMMSAWDLHKAWPEADFKVVADAGHSANEPGIA---AELVATNEKLKNL 326 (331)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~---~~~~~~i~~fl~~ 326 (331)
+|++.++.+.+.+ ++++++++++||+++.+. + .++.+.|.+|+++
T Consensus 142 ~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~-~~~~~~~~~~l~~~l~~ 189 (192)
T 1uxo_A 142 VPFSFSKDLAQQI-DAALYEVQHGGHFLEDEG-FTSLPIVYDVLTSYFSK 189 (192)
T ss_dssp SCHHHHHHHHHHT-TCEEEEETTCTTSCGGGT-CSCCHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHhc-CceEEEeCCCcCcccccc-cccHHHHHHHHHHHHHH
Confidence 9999999999999 999999999999998765 4 4467777777764
|
| >2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-27 Score=176.14 Aligned_cols=170 Identities=16% Similarity=0.102 Sum_probs=135.4
Q ss_pred CCCcEEEeccCCCCCCC-C--CcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhC-CCcEEEEE
Q 020064 44 TGHPVVFLHGGPGGGTT-P--SNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLE-IPEWQVFG 119 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~~-~--~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~lvG 119 (331)
++|+||++||++++... . .+...+.+.||.|+++|+||+|.|.... ...+..+.++++.+.++... .++++++|
T Consensus 3 ~~~~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~G 80 (176)
T 2qjw_A 3 SRGHCILAHGFESGPDALKVTALAEVAERLGWTHERPDFTDLDARRDLG--QLGDVRGRLQRLLEIARAATEKGPVVLAG 80 (176)
T ss_dssp SSCEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEECCCCHHHHTCGGGC--TTCCHHHHHHHHHHHHHHHHTTSCEEEEE
T ss_pred CCcEEEEEeCCCCCccHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC--CCCCHHHHHHHHHHHHHhcCCCCCEEEEE
Confidence 56789999997765442 2 4556666789999999999999987443 34556777777777776654 57999999
Q ss_pred eChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhccccCCCchH
Q 020064 120 GSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKE 199 (331)
Q Consensus 120 ~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (331)
||+||.+++.++.++| ++++|+++++..... .
T Consensus 81 ~S~Gg~~a~~~a~~~~--~~~~v~~~~~~~~~~----------------------------------------~------ 112 (176)
T 2qjw_A 81 SSLGSYIAAQVSLQVP--TRALFLMVPPTKMGP----------------------------------------L------ 112 (176)
T ss_dssp ETHHHHHHHHHHTTSC--CSEEEEESCCSCBTT----------------------------------------B------
T ss_pred ECHHHHHHHHHHHhcC--hhheEEECCcCCccc----------------------------------------c------
Confidence 9999999999999998 999999998643210 0
Q ss_pred HHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCCCc
Q 020064 200 TQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVC 279 (331)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~ 279 (331)
. .+.++ ++|+++++|++|.+
T Consensus 113 ------------------------------------------------------~-----~~~~~-~~P~l~i~g~~D~~ 132 (176)
T 2qjw_A 113 ------------------------------------------------------P-----ALDAA-AVPISIVHAWHDEL 132 (176)
T ss_dssp ------------------------------------------------------C-----CCCCC-SSCEEEEEETTCSS
T ss_pred ------------------------------------------------------C-----ccccc-CCCEEEEEcCCCCc
Confidence 0 03345 59999999999999
Q ss_pred cCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhh
Q 020064 280 CPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNLI 327 (331)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 327 (331)
+|++.++.+.+.+ +++++++ ++||.+. +. ++++.+.|.+|++++
T Consensus 133 ~~~~~~~~~~~~~-~~~~~~~-~~~H~~~-~~-~~~~~~~i~~fl~~l 176 (176)
T 2qjw_A 133 IPAADVIAWAQAR-SARLLLV-DDGHRLG-AH-VQAASRAFAELLQSL 176 (176)
T ss_dssp SCHHHHHHHHHHH-TCEEEEE-SSCTTCT-TC-HHHHHHHHHHHHHTC
T ss_pred cCHHHHHHHHHhC-CceEEEe-CCCcccc-cc-HHHHHHHHHHHHHhC
Confidence 9999999998887 7899999 8999984 54 999999999999864
|
| >3bdv_A Uncharacterized protein DUF1234; DUF1234 family protein, alpha/beta-hydrolases fold, structur genomics; HET: MSE; 1.66A {Pectobacterium atrosepticum SCRI1043} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-27 Score=178.37 Aligned_cols=176 Identities=14% Similarity=0.094 Sum_probs=135.1
Q ss_pred eEEEEeCCCCCCCcEEEeccCCCCC-CCC-CcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhC
Q 020064 34 TIYWEQSGNPTGHPVVFLHGGPGGG-TTP-SNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLE 111 (331)
Q Consensus 34 ~l~~~~~g~~~~~~vl~~HG~~~~~-~~~-~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (331)
+++|...| ++++||++||++++. ..| ......+.. ++.+|++|++ .++++++++++.++++.++
T Consensus 8 ~l~~~~~g--~~~~vv~~HG~~~~~~~~~~~~~~~~~~~---~~~v~~~~~~---------~~~~~~~~~~~~~~~~~~~ 73 (191)
T 3bdv_A 8 DLRLTEVS--QQLTMVLVPGLRDSDDEHWQSHWERRFPH---WQRIRQREWY---------QADLDRWVLAIRRELSVCT 73 (191)
T ss_dssp HHHHHHHH--TTCEEEEECCTTCCCTTSHHHHHHHHCTT---SEECCCSCCS---------SCCHHHHHHHHHHHHHTCS
T ss_pred ccccCCCC--CCceEEEECCCCCCchhhHHHHHHHhcCC---eEEEeccCCC---------CcCHHHHHHHHHHHHHhcC
Confidence 45555555 578999999977665 332 233333333 4567888763 3568899999999999988
Q ss_pred CCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhcc
Q 020064 112 IPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSK 191 (331)
Q Consensus 112 ~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (331)
++++++||||||.+++.+|.++|++++++|++++....... .+.
T Consensus 74 -~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~-----------------------~~~------------ 117 (191)
T 3bdv_A 74 -QPVILIGHSFGALAACHVVQQGQEGIAGVMLVAPAEPMRFE-----------------------IDD------------ 117 (191)
T ss_dssp -SCEEEEEETHHHHHHHHHHHTTCSSEEEEEEESCCCGGGGT-----------------------CTT------------
T ss_pred -CCeEEEEEChHHHHHHHHHHhcCCCccEEEEECCCcccccc-----------------------Ccc------------
Confidence 89999999999999999999999999999999986532100 000
Q ss_pred ccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEE
Q 020064 192 RLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATI 271 (331)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~ 271 (331)
. ..+.++ ++|+++
T Consensus 118 --------------------------------------------------------------~----~~~~~~-~~P~li 130 (191)
T 3bdv_A 118 --------------------------------------------------------------R----IQASPL-SVPTLT 130 (191)
T ss_dssp --------------------------------------------------------------T----SCSSCC-SSCEEE
T ss_pred --------------------------------------------------------------c----cccccC-CCCEEE
Confidence 0 134566 599999
Q ss_pred EecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcC---CchhHHHHHHHHHHHhhh
Q 020064 272 VQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEP---GIAAELVATNEKLKNLIK 328 (331)
Q Consensus 272 i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~---~~~~~~~~~i~~fl~~~~ 328 (331)
++|++|.++|++.++.+.+.+ ++++++++++||+++.+ ..++ +.+.|.+|++++.
T Consensus 131 i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~~~~~~~-~~~~i~~fl~~~~ 188 (191)
T 3bdv_A 131 FASHNDPLMSFTRAQYWAQAW-DSELVDVGEAGHINAEAGFGPWEY-GLKRLAEFSEILI 188 (191)
T ss_dssp EECSSBTTBCHHHHHHHHHHH-TCEEEECCSCTTSSGGGTCSSCHH-HHHHHHHHHHTTC
T ss_pred EecCCCCcCCHHHHHHHHHhc-CCcEEEeCCCCcccccccchhHHH-HHHHHHHHHHHhc
Confidence 999999999999999999887 89999999999999774 3244 4599999999874
|
| >2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.94 E-value=6.2e-26 Score=173.16 Aligned_cols=193 Identities=12% Similarity=0.006 Sum_probs=143.8
Q ss_pred CCccceeEeCCCceEEEEeCCC-----CCCCcEEEeccCCC---CCC---CCCcccccCCCCcEEEEecCCCCCCCCCCC
Q 020064 21 PYSTGILKVSDIHTIYWEQSGN-----PTGHPVVFLHGGPG---GGT---TPSNRRFFDPDFYRIILFDQRGAGKSTPHA 89 (331)
Q Consensus 21 ~~~~~~~~~~~g~~l~~~~~g~-----~~~~~vl~~HG~~~---~~~---~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~ 89 (331)
..+...+...+| ++.+....+ .+.|+||++||++. +.. +..+...+.++||.|+++|+||+|.|....
T Consensus 9 ~~~~~~~~~~~g-~~~~~~~~p~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~ 87 (220)
T 2fuk_A 9 ESAALTLDGPVG-PLDVAVDLPEPDVAVQPVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFRSVGTSAGSF 87 (220)
T ss_dssp SCEEEEEEETTE-EEEEEEECCCTTSCCCSEEEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEECCTTSTTCCSCC
T ss_pred cceEEEEeCCCC-eEEEEEEeCCCCCccccCEEEEECCCCCcCCcccchHHHHHHHHHHHCCCeEEEEecCCCCCCCCCc
Confidence 345667888888 665543322 23678999999532 111 234556676789999999999999998654
Q ss_pred CCCccchHHHHHHHHHHHHH----hCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccC
Q 020064 90 CLDQNTTWDLIDDIEKLRQH----LEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAI 165 (331)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~----~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~ 165 (331)
.. .....+|+.++++. .+.++++++|||+||.+++.++..+ +++++|++++......
T Consensus 88 ~~----~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~v~~~v~~~~~~~~~~------------- 148 (220)
T 2fuk_A 88 DH----GDGEQDDLRAVAEWVRAQRPTDTLWLAGFSFGAYVSLRAAAAL--EPQVLISIAPPAGRWD------------- 148 (220)
T ss_dssp CT----TTHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHHH--CCSEEEEESCCBTTBC-------------
T ss_pred cc----CchhHHHHHHHHHHHHhcCCCCcEEEEEECHHHHHHHHHHhhc--cccEEEEecccccchh-------------
Confidence 21 23445555554444 4556999999999999999999988 8999999998653210
Q ss_pred ChhhHHhhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhh
Q 020064 166 YPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYF 245 (331)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (331)
T Consensus 149 -------------------------------------------------------------------------------- 148 (220)
T 2fuk_A 149 -------------------------------------------------------------------------------- 148 (220)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hccCCCCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhC-CCCcEEEecCCCCCCCcCCchhHHHHHHHHHH
Q 020064 246 LNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAW-PEADFKVVADAGHSANEPGIAAELVATNEKLK 324 (331)
Q Consensus 246 ~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl 324 (331)
.+.+.. .+|+++++|++|.++|++.++.+.+.+ +++++++++++||.+..+ ++++.+.+.+|+
T Consensus 149 ------------~~~~~~--~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~--~~~~~~~i~~~l 212 (220)
T 2fuk_A 149 ------------FSDVQP--PAQWLVIQGDADEIVDPQAVYDWLETLEQQPTLVRMPDTSHFFHRK--LIDLRGALQHGV 212 (220)
T ss_dssp ------------CTTCCC--CSSEEEEEETTCSSSCHHHHHHHHTTCSSCCEEEEETTCCTTCTTC--HHHHHHHHHHHH
T ss_pred ------------hhhccc--CCcEEEEECCCCcccCHHHHHHHHHHhCcCCcEEEeCCCCceehhh--HHHHHHHHHHHH
Confidence 000111 389999999999999999999999998 889999999999998774 889999999999
Q ss_pred Hhhhc
Q 020064 325 NLIKN 329 (331)
Q Consensus 325 ~~~~~ 329 (331)
++..+
T Consensus 213 ~~~l~ 217 (220)
T 2fuk_A 213 RRWLP 217 (220)
T ss_dssp GGGCS
T ss_pred HHHhh
Confidence 87653
|
| >1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo sapiens} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.94 E-value=6.2e-27 Score=180.19 Aligned_cols=177 Identities=19% Similarity=0.166 Sum_probs=132.6
Q ss_pred CCCCcEEEeccCCCCC-CCCCcccccCCCCcEEEEe-------------------cCCCCCCCCCCCCCCccchHHHHHH
Q 020064 43 PTGHPVVFLHGGPGGG-TTPSNRRFFDPDFYRIILF-------------------DQRGAGKSTPHACLDQNTTWDLIDD 102 (331)
Q Consensus 43 ~~~~~vl~~HG~~~~~-~~~~~~~~~~~~g~~vi~~-------------------D~~G~G~s~~~~~~~~~~~~~~~~~ 102 (331)
...|+||++||++++. .|......+.+.||.|+++ |++|+ .+.... ...++++.+++
T Consensus 21 ~~~~~vv~lHG~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~w~d~~g~-~~~~~~--~~~~~~~~~~~ 97 (232)
T 1fj2_A 21 KATAAVIFLHGLGDTGHGWAEAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPSWFDIIGL-SPDSQE--DESGIKQAAEN 97 (232)
T ss_dssp CCSEEEEEECCSSSCHHHHHHHHHTTCCTTEEEEECCCCEEEEGGGTTEEEECSSCBCCC-STTCCB--CHHHHHHHHHH
T ss_pred CCCceEEEEecCCCccchHHHHHHHHhcCCcEEEecCCCccccccccccccccccccccC-Cccccc--ccHHHHHHHHH
Confidence 3678899999977664 3445566666679999998 66666 332222 35678889999
Q ss_pred HHHHHHHh---CC--CcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccC
Q 020064 103 IEKLRQHL---EI--PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLI 177 (331)
Q Consensus 103 ~~~~~~~~---~~--~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (331)
+.++++.+ +. ++++++|||+||.+++.++.++|++++++|++++....... .
T Consensus 98 ~~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~-----------------------~ 154 (232)
T 1fj2_A 98 IKALIDQEVKNGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRAS-----------------------F 154 (232)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCCCTTGGG-----------------------S
T ss_pred HHHHHHHHhcCCCCcCCEEEEEECHHHHHHHHHHHhCCCceeEEEEeecCCCCCcc-----------------------c
Confidence 99999886 55 79999999999999999999999999999999985432100 0
Q ss_pred CcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchh
Q 020064 178 PENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFL 257 (331)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (331)
. ..
T Consensus 155 ~-----------------------------------------------------------------------------~~ 157 (232)
T 1fj2_A 155 P-----------------------------------------------------------------------------QG 157 (232)
T ss_dssp C-----------------------------------------------------------------------------SS
T ss_pred c-----------------------------------------------------------------------------cc
Confidence 0 00
Q ss_pred hhhccccccccEEEEecCCCCccCCcchHHHHHhC------CCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhhh
Q 020064 258 LDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAW------PEADFKVVADAGHSANEPGIAAELVATNEKLKNLIK 328 (331)
Q Consensus 258 ~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~------~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~ 328 (331)
...+..+ ++|+|+++|++|.+++.+.++.+.+.+ +++++++++++||.+..+. .+.+.+|+++..
T Consensus 158 ~~~~~~~-~~P~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~H~~~~~~-----~~~i~~~l~~~l 228 (232)
T 1fj2_A 158 PIGGANR-DISILQCHGDCDPLVPLMFGSLTVEKLKTLVNPANVTFKTYEGMMHSSCQQE-----MMDVKQFIDKLL 228 (232)
T ss_dssp CCCSTTT-TCCEEEEEETTCSSSCHHHHHHHHHHHHHHSCGGGEEEEEETTCCSSCCHHH-----HHHHHHHHHHHS
T ss_pred ccccccC-CCCEEEEecCCCccCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCcccCHHH-----HHHHHHHHHHhc
Confidence 0123455 599999999999999998888777766 5689999999999985443 366777776644
|
| >2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41 | Back alignment and structure |
|---|
Probab=99.94 E-value=3.3e-26 Score=189.32 Aligned_cols=230 Identities=13% Similarity=0.006 Sum_probs=156.7
Q ss_pred CCccceeEeCCCceEEEEeCCC---CCCCcEEEeccCCCCCC-CCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccch
Q 020064 21 PYSTGILKVSDIHTIYWEQSGN---PTGHPVVFLHGGPGGGT-TPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTT 96 (331)
Q Consensus 21 ~~~~~~~~~~~g~~l~~~~~g~---~~~~~vl~~HG~~~~~~-~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~ 96 (331)
..+...+.. +|.++.+....+ .+.|+||++||++++.. ++.....++++||.|+++|+||+|.|.... ....++
T Consensus 126 ~~~~v~~~~-dg~~i~~~l~~p~~~~~~P~vl~~hG~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~G~s~~~~-~~~~~~ 203 (386)
T 2jbw_A 126 PAERHELVV-DGIPMPVYVRIPEGPGPHPAVIMLGGLESTKEESFQMENLVLDRGMATATFDGPGQGEMFEYK-RIAGDY 203 (386)
T ss_dssp CEEEEEEEE-TTEEEEEEEECCSSSCCEEEEEEECCSSCCTTTTHHHHHHHHHTTCEEEEECCTTSGGGTTTC-CSCSCH
T ss_pred CeEEEEEEe-CCEEEEEEEEcCCCCCCCCEEEEeCCCCccHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCC-CCCccH
Confidence 445566666 677887665533 23467889999766543 455566777899999999999999983222 135677
Q ss_pred HHHHHHHHHHHHH---hCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhh
Q 020064 97 WDLIDDIEKLRQH---LEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESF 173 (331)
Q Consensus 97 ~~~~~~~~~~~~~---~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (331)
++.+.++.+++.. ++.++++++|||+||.+++.++.. |++++++|++ +........ .
T Consensus 204 ~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~la~~~a~~-~~~~~a~v~~-~~~~~~~~~----------------~-- 263 (386)
T 2jbw_A 204 EKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAAC-EPRLAACISW-GGFSDLDYW----------------D-- 263 (386)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHH-CTTCCEEEEE-SCCSCSTTG----------------G--
T ss_pred HHHHHHHHHHHHhCCCcCcccEEEEEEChHHHHHHHHHcC-CcceeEEEEe-ccCChHHHH----------------H--
Confidence 7788888888877 566799999999999999999999 8899999999 654321100 0
Q ss_pred hccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHH-HHHhhhhhhhhhccCCCC
Q 020064 174 RDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFS-LAFARIENHYFLNKGFFP 252 (331)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 252 (331)
..+.... ......+.. ..+. .+. ..+.
T Consensus 264 --~~~~~~~----~~~~~~~g~------------------------~~~~--------~~~~~~~~-------------- 291 (386)
T 2jbw_A 264 --LETPLTK----ESWKYVSKV------------------------DTLE--------EARLHVHA-------------- 291 (386)
T ss_dssp --GSCHHHH----HHHHHHTTC------------------------SSHH--------HHHHHHHH--------------
T ss_pred --hccHHHH----HHHHHHhCC------------------------CCHH--------HHHHHHHH--------------
Confidence 0000000 000000000 0000 000 0000
Q ss_pred CcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhC-C-CCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhhhc
Q 020064 253 SDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAW-P-EADFKVVADAGHSANEPGIAAELVATNEKLKNLIKN 329 (331)
Q Consensus 253 ~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~-~-~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~~ 329 (331)
..+....+.++ ++|+|+++|++|. ++++.++.+.+.+ + ++++++++++||.. .+. ++++.+.|.+||++..+
T Consensus 292 -~~~~~~~~~~i-~~P~Lii~G~~D~-v~~~~~~~l~~~l~~~~~~~~~~~~~gH~~-~~~-~~~~~~~i~~fl~~~l~ 365 (386)
T 2jbw_A 292 -ALETRDVLSQI-ACPTYILHGVHDE-VPLSFVDTVLELVPAEHLNLVVEKDGDHCC-HNL-GIRPRLEMADWLYDVLV 365 (386)
T ss_dssp -HTCCTTTGGGC-CSCEEEEEETTSS-SCTHHHHHHHHHSCGGGEEEEEETTCCGGG-GGG-TTHHHHHHHHHHHHHHT
T ss_pred -hCChhhhhccc-CCCEEEEECCCCC-CCHHHHHHHHHHhcCCCcEEEEeCCCCcCC-ccc-hHHHHHHHHHHHHHhcC
Confidence 11223457788 5999999999999 9999999999999 7 79999999999976 444 88999999999987653
|
| >2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold, structural genomics, joint cente structural genomics, JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.94 E-value=1.1e-26 Score=182.20 Aligned_cols=205 Identities=11% Similarity=-0.017 Sum_probs=141.4
Q ss_pred ceeEeCCCceEEEEeCCC--CCCCcEEEeccCC---CC-CCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHH
Q 020064 25 GILKVSDIHTIYWEQSGN--PTGHPVVFLHGGP---GG-GTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWD 98 (331)
Q Consensus 25 ~~~~~~~g~~l~~~~~g~--~~~~~vl~~HG~~---~~-~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~ 98 (331)
..+...++..+.+..+.+ +++|+||++||++ ++ ..+..+...+.+.||+|+++|+||+|. .++.+
T Consensus 41 ~~i~~~~~~~~~~~~~~p~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~~~~~---------~~~~~ 111 (262)
T 2pbl_A 41 LNLSYGEGDRHKFDLFLPEGTPVGLFVFVHGGYWMAFDKSSWSHLAVGALSKGWAVAMPSYELCPE---------VRISE 111 (262)
T ss_dssp EEEESSSSTTCEEEEECCSSSCSEEEEEECCSTTTSCCGGGCGGGGHHHHHTTEEEEEECCCCTTT---------SCHHH
T ss_pred cccccCCCCCceEEEEccCCCCCCEEEEEcCcccccCChHHHHHHHHHHHhCCCEEEEeCCCCCCC---------CChHH
Confidence 344444544444333321 3568899999953 33 334556666667899999999999864 34677
Q ss_pred HHHHHHHHHHHhCC---CcEEEEEeChhHHHHHHHHHhC------CCceeeEEEeccccchhhhhhhHhhcccccCChhh
Q 020064 99 LIDDIEKLRQHLEI---PEWQVFGGSWGSTLALAYSLAH------PDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDA 169 (331)
Q Consensus 99 ~~~~~~~~~~~~~~---~~v~lvG~S~Gg~~a~~~a~~~------p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (331)
+++|+.++++.+.. ++++++||||||.+++.++..+ |++++++|++++.........
T Consensus 112 ~~~d~~~~~~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~v~~~vl~~~~~~~~~~~~-------------- 177 (262)
T 2pbl_A 112 ITQQISQAVTAAAKEIDGPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSDLRPLLR-------------- 177 (262)
T ss_dssp HHHHHHHHHHHHHHHSCSCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCCCCCGGGGG--------------
T ss_pred HHHHHHHHHHHHHHhccCCEEEEEECHHHHHHHHHhccccccccccccceEEEEecCccCchHHHh--------------
Confidence 78888887777654 5999999999999999999988 889999999998653211000
Q ss_pred HHhhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccC
Q 020064 170 WESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKG 249 (331)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (331)
...... +. .......
T Consensus 178 --------------~~~~~~---~~-------------------------~~~~~~~----------------------- 192 (262)
T 2pbl_A 178 --------------TSMNEK---FK-------------------------MDADAAI----------------------- 192 (262)
T ss_dssp --------------STTHHH---HC-------------------------CCHHHHH-----------------------
T ss_pred --------------hhhhhh---hC-------------------------CCHHHHH-----------------------
Confidence 000000 00 0000000
Q ss_pred CCCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHH
Q 020064 250 FFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLK 324 (331)
Q Consensus 250 ~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl 324 (331)
.......+.++ ++|+|+++|++|.+++.+.++.+.+.++ +++++++++||+.+.+. ++.....+.+++
T Consensus 193 ----~~~~~~~~~~~-~~P~lii~G~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~H~~~~~~-~~~~~~~l~~~l 260 (262)
T 2pbl_A 193 ----AESPVEMQNRY-DAKVTVWVGGAERPAFLDQAIWLVEAWD-ADHVIAFEKHHFNVIEP-LADPESDLVAVI 260 (262)
T ss_dssp ----HTCGGGCCCCC-SCEEEEEEETTSCHHHHHHHHHHHHHHT-CEEEEETTCCTTTTTGG-GGCTTCHHHHHH
T ss_pred ----hcCcccccCCC-CCCEEEEEeCCCCcccHHHHHHHHHHhC-CeEEEeCCCCcchHHhh-cCCCCcHHHHHH
Confidence 00111234567 5999999999999999999999999998 99999999999998885 777777776665
|
| >3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba} | Back alignment and structure |
|---|
Probab=99.94 E-value=5.5e-26 Score=181.92 Aligned_cols=179 Identities=15% Similarity=0.181 Sum_probs=137.8
Q ss_pred eEEEEeCCCCCCCcEEEeccCCCCC-CCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHH----
Q 020064 34 TIYWEQSGNPTGHPVVFLHGGPGGG-TTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQ---- 108 (331)
Q Consensus 34 ~l~~~~~g~~~~~~vl~~HG~~~~~-~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~---- 108 (331)
.+++...++ ..|+||++||++++. .|..+...+.++||.|+++|+||+|.|.... .+++.+.+..+.+
T Consensus 86 ~~~~p~~~~-~~p~vv~~HG~~~~~~~~~~~~~~la~~G~~vv~~d~~g~g~s~~~~------~~d~~~~~~~l~~~~~~ 158 (306)
T 3vis_A 86 TIYYPRENN-TYGAIAISPGYTGTQSSIAWLGERIASHGFVVIAIDTNTTLDQPDSR------ARQLNAALDYMLTDASS 158 (306)
T ss_dssp EEEEESSCS-CEEEEEEECCTTCCHHHHHHHHHHHHTTTEEEEEECCSSTTCCHHHH------HHHHHHHHHHHHHTSCH
T ss_pred EEEeeCCCC-CCCEEEEeCCCcCCHHHHHHHHHHHHhCCCEEEEecCCCCCCCcchH------HHHHHHHHHHHHhhcch
Confidence 556655443 567899999977663 3455677777889999999999999885322 2333333333333
Q ss_pred ----HhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhh
Q 020064 109 ----HLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSC 184 (331)
Q Consensus 109 ----~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (331)
.++.++++++|||+||.+++.++..+|+ ++++|++++....
T Consensus 159 ~~~~~~~~~~v~l~G~S~GG~~a~~~a~~~p~-v~~~v~~~~~~~~---------------------------------- 203 (306)
T 3vis_A 159 AVRNRIDASRLAVMGHSMGGGGTLRLASQRPD-LKAAIPLTPWHLN---------------------------------- 203 (306)
T ss_dssp HHHTTEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEESCCCSC----------------------------------
T ss_pred hhhccCCcccEEEEEEChhHHHHHHHHhhCCC-eeEEEEeccccCc----------------------------------
Confidence 2355689999999999999999999997 9999998874310
Q ss_pred hHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhcccc
Q 020064 185 FVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNI 264 (331)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 264 (331)
..+.++
T Consensus 204 --------------------------------------------------------------------------~~~~~~ 209 (306)
T 3vis_A 204 --------------------------------------------------------------------------KSWRDI 209 (306)
T ss_dssp --------------------------------------------------------------------------CCCTTC
T ss_pred --------------------------------------------------------------------------cccccC
Confidence 124456
Q ss_pred ccccEEEEecCCCCccCCc-chHHHHHhCCC---CcEEEecCCCCCCCcCCchhHHHHHHHHHHHhhhcC
Q 020064 265 RHINATIVQGRYDVCCPMM-SAWDLHKAWPE---ADFKVVADAGHSANEPGIAAELVATNEKLKNLIKNG 330 (331)
Q Consensus 265 ~~~P~l~i~G~~D~~~~~~-~~~~~~~~~~~---~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~~~ 330 (331)
++|+|+++|++|.++|++ ..+.+.+.+++ .++++++++||.++.+. ++++.+.+.+||++..++
T Consensus 210 -~~P~lii~G~~D~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~gH~~~~~~-~~~~~~~i~~fl~~~l~~ 277 (306)
T 3vis_A 210 -TVPTLIIGAEYDTIASVTLHSKPFYNSIPSPTDKAYLELDGASHFAPNIT-NKTIGMYSVAWLKRFVDE 277 (306)
T ss_dssp -CSCEEEEEETTCSSSCTTTTHHHHHHTCCTTSCEEEEEETTCCTTGGGSC-CHHHHHHHHHHHHHHHSC
T ss_pred -CCCEEEEecCCCcccCcchhHHHHHHHhccCCCceEEEECCCCccchhhc-hhHHHHHHHHHHHHHccC
Confidence 599999999999999998 69999999865 46899999999999886 899999999999886543
|
| >1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B* | Back alignment and structure |
|---|
Probab=99.94 E-value=4.7e-25 Score=177.86 Aligned_cols=235 Identities=15% Similarity=0.042 Sum_probs=148.7
Q ss_pred ccceeEeCCCceEEEEeC---CCCCCCcEEEeccCCCC-CCCCCcccccCCCCcEEEEecCCCCCCCCCCCC--------
Q 020064 23 STGILKVSDIHTIYWEQS---GNPTGHPVVFLHGGPGG-GTTPSNRRFFDPDFYRIILFDQRGAGKSTPHAC-------- 90 (331)
Q Consensus 23 ~~~~~~~~~g~~l~~~~~---g~~~~~~vl~~HG~~~~-~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~-------- 90 (331)
+...+...+|.++.+... +..+.|+||++||++++ ...+.....+++.||.|+++|+||+|.|.....
T Consensus 57 ~~~~~~~~~g~~i~~~~~~P~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~rg~g~s~~~~~~~~~~~~~ 136 (318)
T 1l7a_A 57 YRLTYKSFGNARITGWYAVPDKEGPHPAIVKYHGYNASYDGEIHEMVNWALHGYATFGMLVRGQQRSEDTSISPHGHALG 136 (318)
T ss_dssp EEEEEEEGGGEEEEEEEEEESSCSCEEEEEEECCTTCCSGGGHHHHHHHHHTTCEEEEECCTTTSSSCCCCCCSSCCSSS
T ss_pred EEEEEEccCCCEEEEEEEeeCCCCCccEEEEEcCCCCCCCCCcccccchhhCCcEEEEecCCCCCCCCCcccccCCcccc
Confidence 344556667767765443 32345789999998777 555444446667899999999999999975521
Q ss_pred --------CCccchHHHHHHHHHHHHHhC------CCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhh
Q 020064 91 --------LDQNTTWDLIDDIEKLRQHLE------IPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDW 156 (331)
Q Consensus 91 --------~~~~~~~~~~~~~~~~~~~~~------~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~ 156 (331)
...+.+....+|+.++++.+. .++++++|||+||.+++.+|..+|+ +.++|+++|..........
T Consensus 137 ~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~-~~~~v~~~p~~~~~~~~~~ 215 (318)
T 1l7a_A 137 WMTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDI-PKAAVADYPYLSNFERAID 215 (318)
T ss_dssp STTTTTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHCSC-CSEEEEESCCSCCHHHHHH
T ss_pred ceeccCCCHHHHHHHHHHHHHHHHHHHHHhCCCcccceeEEEecChHHHHHHHHhccCCC-ccEEEecCCcccCHHHHHh
Confidence 112334566777777766652 2689999999999999999999885 8888887764322110000
Q ss_pred HhhcccccCChhhHHhhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHH
Q 020064 157 FYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLA 236 (331)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (331)
............+... .. .+.. ....
T Consensus 216 ----------------~~~~~~~~~~~~~~~~----~~--------------------------~~~~--------~~~~ 241 (318)
T 1l7a_A 216 ----------------VALEQPYLEINSFFRR----NG--------------------------SPET--------EVQA 241 (318)
T ss_dssp ----------------HCCSTTTTHHHHHHHH----SC--------------------------CHHH--------HHHH
T ss_pred ----------------cCCcCccHHHHHHHhc----cC--------------------------Cccc--------HHHH
Confidence 0000000000000000 00 0000 0000
Q ss_pred HhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCCC-CcEEEecCCCCCCCcCCchhH
Q 020064 237 FARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPE-ADFKVVADAGHSANEPGIAAE 315 (331)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~~~~~ 315 (331)
+.... ..+....+.++ ++|+|+++|++|.++|++.++.+.+.+++ +++++++++||.. ..+
T Consensus 242 ~~~~~------------~~~~~~~~~~~-~~P~li~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~~-----~~~ 303 (318)
T 1l7a_A 242 MKTLS------------YFDIMNLADRV-KVPVLMSIGLIDKVTPPSTVFAAYNHLETKKELKVYRYFGHEY-----IPA 303 (318)
T ss_dssp HHHHH------------TTCHHHHGGGC-CSCEEEEEETTCSSSCHHHHHHHHHHCCSSEEEEEETTCCSSC-----CHH
T ss_pred HHhhc------------cccHHHHHhhC-CCCEEEEeccCCCCCCcccHHHHHhhcCCCeeEEEccCCCCCC-----cch
Confidence 00000 11233456778 59999999999999999999999999864 8899999999993 445
Q ss_pred HHHHHHHHHHhhhcC
Q 020064 316 LVATNEKLKNLIKNG 330 (331)
Q Consensus 316 ~~~~i~~fl~~~~~~ 330 (331)
..+.+.+|+++..+|
T Consensus 304 ~~~~~~~fl~~~l~g 318 (318)
T 1l7a_A 304 FQTEKLAFFKQILKG 318 (318)
T ss_dssp HHHHHHHHHHHHHCC
T ss_pred hHHHHHHHHHHHhCC
Confidence 688888888876543
|
| >3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=3.2e-26 Score=191.32 Aligned_cols=120 Identities=13% Similarity=0.033 Sum_probs=88.9
Q ss_pred ceeEeCCCceEEEE---eCCCCCCCcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHH
Q 020064 25 GILKVSDIHTIYWE---QSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLID 101 (331)
Q Consensus 25 ~~~~~~~g~~l~~~---~~g~~~~~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~ 101 (331)
..+.+.++ .+... ..+....|+||++||++++ .+...+..+.++||+|+++|+||+|.+.... .....+++.+
T Consensus 136 ~~~~~~~~-~l~~~l~~P~~~~~~P~Vv~~hG~~~~-~~~~~a~~La~~Gy~V~a~D~rG~g~~~~~~--~~~~~~d~~~ 211 (422)
T 3k2i_A 136 WRQSVRAG-RVRATLFLPPGPGPFPGIIDIFGIGGG-LLEYRASLLAGHGFATLALAYYNFEDLPNNM--DNISLEYFEE 211 (422)
T ss_dssp EEEEEEET-TEEEEEEECSSSCCBCEEEEECCTTCS-CCCHHHHHHHTTTCEEEEEECSSSTTSCSSC--SCEETHHHHH
T ss_pred EEEEEeCC-cEEEEEEcCCCCCCcCEEEEEcCCCcc-hhHHHHHHHHhCCCEEEEEccCCCCCCCCCc--ccCCHHHHHH
Confidence 34455555 34332 2333356889999997654 2333466677899999999999999887554 3456777777
Q ss_pred HHHHHHHHhC--CCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccc
Q 020064 102 DIEKLRQHLE--IPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLL 149 (331)
Q Consensus 102 ~~~~~~~~~~--~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~ 149 (331)
.+..+.+..+ .++++++||||||.+++.+|..+|+ ++++|++++...
T Consensus 212 ~~~~l~~~~~v~~~~i~l~G~S~GG~lAl~~a~~~p~-v~a~V~~~~~~~ 260 (422)
T 3k2i_A 212 AVCYMLQHPQVKGPGIGLLGISLGADICLSMASFLKN-VSATVSINGSGI 260 (422)
T ss_dssp HHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSS-EEEEEEESCCSB
T ss_pred HHHHHHhCcCcCCCCEEEEEECHHHHHHHHHHhhCcC-ccEEEEEcCccc
Confidence 7777666543 4799999999999999999999997 999999987653
|
| >2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics, MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.94 E-value=6.9e-27 Score=179.20 Aligned_cols=192 Identities=15% Similarity=0.116 Sum_probs=135.3
Q ss_pred CccceeEeCCCceEEEEeCCC-CCCCcEEEeccCCCCCCC-CCcccccCCCCcEEEEe--cCCCCCCCCCCCC--CCccc
Q 020064 22 YSTGILKVSDIHTIYWEQSGN-PTGHPVVFLHGGPGGGTT-PSNRRFFDPDFYRIILF--DQRGAGKSTPHAC--LDQNT 95 (331)
Q Consensus 22 ~~~~~~~~~~g~~l~~~~~g~-~~~~~vl~~HG~~~~~~~-~~~~~~~~~~g~~vi~~--D~~G~G~s~~~~~--~~~~~ 95 (331)
.++.+++.++ .+++|...|+ ++.|+||++||++++... ......+. .||.|+++ |++|+|.|..... ...++
T Consensus 15 ~~e~~~~~~~-~~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~-~g~~v~~~~~d~~g~g~s~~~~~~~~~~~~ 92 (226)
T 2h1i_A 15 TENLYFQSNA-MMKHVFQKGKDTSKPVLLLLHGTGGNELDLLPLAEIVD-SEASVLSVRGNVLENGMPRFFRRLAEGIFD 92 (226)
T ss_dssp CCCHHHHHHS-SSCEEEECCSCTTSCEEEEECCTTCCTTTTHHHHHHHH-TTSCEEEECCSEEETTEEESSCEEETTEEC
T ss_pred ceeeeecCCC-ceeEEecCCCCCCCcEEEEEecCCCChhHHHHHHHHhc-cCceEEEecCcccCCcchhhccccCccCcC
Confidence 4455666554 4888888875 467899999997776544 44455554 49999999 9999998753211 11234
Q ss_pred hHHHHHHHHH---HH----HHh--CCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCC
Q 020064 96 TWDLIDDIEK---LR----QHL--EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIY 166 (331)
Q Consensus 96 ~~~~~~~~~~---~~----~~~--~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~ 166 (331)
..++.+++.. ++ +.. +.++++++|||+||.+++.++..+|++++++|++++......
T Consensus 93 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~-------------- 158 (226)
T 2h1i_A 93 EEDLIFRTKELNEFLDEAAKEYKFDRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPMVPRRG-------------- 158 (226)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCTTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCSS--------------
T ss_pred hhhHHHHHHHHHHHHHHHHhhcCCCcccEEEEEEChHHHHHHHHHHhChhhhCEEEEeCCCCCcCc--------------
Confidence 4444444333 33 344 447999999999999999999999999999999998543100
Q ss_pred hhhHHhhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhh
Q 020064 167 PDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFL 246 (331)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (331)
T Consensus 159 -------------------------------------------------------------------------------- 158 (226)
T 2h1i_A 159 -------------------------------------------------------------------------------- 158 (226)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCCC--CcEE-EecCCCCCCCcCCchhHHHHHHHHH
Q 020064 247 NKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPE--ADFK-VVADAGHSANEPGIAAELVATNEKL 323 (331)
Q Consensus 247 ~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~--~~~~-~~~~~gH~~~~~~~~~~~~~~i~~f 323 (331)
......+ ++|+++++|++|.+++.+.++.+.+.+++ ..+. +++++||.+..+ ..+.+.+|
T Consensus 159 -----------~~~~~~~-~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~gH~~~~~-----~~~~~~~~ 221 (226)
T 2h1i_A 159 -----------MQLANLA-GKSVFIAAGTNDPICSSAESEELKVLLENANANVTMHWENRGHQLTMG-----EVEKAKEW 221 (226)
T ss_dssp -----------CCCCCCT-TCEEEEEEESSCSSSCHHHHHHHHHHHHTTTCEEEEEEESSTTSCCHH-----HHHHHHHH
T ss_pred -----------ccccccc-CCcEEEEeCCCCCcCCHHHHHHHHHHHHhcCCeEEEEeCCCCCCCCHH-----HHHHHHHH
Confidence 0001123 59999999999999999888888888852 3344 899999998544 35566666
Q ss_pred HHh
Q 020064 324 KNL 326 (331)
Q Consensus 324 l~~ 326 (331)
+++
T Consensus 222 l~~ 224 (226)
T 2h1i_A 222 YDK 224 (226)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
|
| >3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.94 E-value=9.2e-26 Score=178.31 Aligned_cols=219 Identities=13% Similarity=0.057 Sum_probs=144.0
Q ss_pred cceeEeCCCceEEEEeCCC------CCCCcEEEeccCCC---C-CCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCc
Q 020064 24 TGILKVSDIHTIYWEQSGN------PTGHPVVFLHGGPG---G-GTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQ 93 (331)
Q Consensus 24 ~~~~~~~~g~~l~~~~~g~------~~~~~vl~~HG~~~---~-~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~ 93 (331)
...+...+|.++.+....+ .+.|+||++||++. + ..+...+..+.++||.|+++|+||+|.|..... ..
T Consensus 16 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~-~~ 94 (276)
T 3hxk_A 16 KSTFSLNDTAWVDFYQLQNPRQNENYTFPAIIICPGGGYQHISQRESDPLALAFLAQGYQVLLLNYTVMNKGTNYNF-LS 94 (276)
T ss_dssp EEECCCBTTBEEEEECCCC------CCBCEEEEECCSTTTSCCGGGSHHHHHHHHHTTCEEEEEECCCTTSCCCSCT-HH
T ss_pred cccccCCCCeEEEEEEeCCcccccCCCCCEEEEEcCCccccCCchhhHHHHHHHHHCCCEEEEecCccCCCcCCCCc-Cc
Confidence 3455666777887665543 23578999999542 2 223345566667899999999999999874321 11
Q ss_pred cchHHHHHHHHHHHHH-----hCCCcEEEEEeChhHHHHHHHHHh-CCCceeeEEEeccccchhhhhhhHhhcccccCCh
Q 020064 94 NTTWDLIDDIEKLRQH-----LEIPEWQVFGGSWGSTLALAYSLA-HPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYP 167 (331)
Q Consensus 94 ~~~~~~~~~~~~~~~~-----~~~~~v~lvG~S~Gg~~a~~~a~~-~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (331)
...+++.+.+..+.+. ++.++++++|||+||.+++.++.. .+.+++++|+++|....... ..
T Consensus 95 ~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~p~~~~~~~------------~~ 162 (276)
T 3hxk_A 95 QNLEEVQAVFSLIHQNHKEWQINPEQVFLLGCSAGGHLAAWYGNSEQIHRPKGVILCYPVTSFTFG------------WP 162 (276)
T ss_dssp HHHHHHHHHHHHHHHHTTTTTBCTTCCEEEEEHHHHHHHHHHSSSCSTTCCSEEEEEEECCBTTSS------------CS
T ss_pred hHHHHHHHHHHHHHHhHHHcCCCcceEEEEEeCHHHHHHHHHHhhccCCCccEEEEecCcccHHhh------------CC
Confidence 1223333333333333 234689999999999999999998 78899999999986542110 00
Q ss_pred hhHHhhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhc
Q 020064 168 DAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLN 247 (331)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (331)
... . + . ... ..+.
T Consensus 163 --------~~~-----~----~-~------------------------~~~--~~~~----------------------- 175 (276)
T 3hxk_A 163 --------SDL-----S----H-F------------------------NFE--IENI----------------------- 175 (276)
T ss_dssp --------SSS-----S----S-S------------------------CCC--CSCC-----------------------
T ss_pred --------cch-----h----h-h------------------------hcC--chhh-----------------------
Confidence 000 0 0 0 000 0000
Q ss_pred cCCCCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCC----CCcEEEecCCCCCCCcCC------------
Q 020064 248 KGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWP----EADFKVVADAGHSANEPG------------ 311 (331)
Q Consensus 248 ~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~~~------------ 311 (331)
...+....+.++ ++|+|+++|++|.++|++.++.+.+.++ ++++++++++||.+....
T Consensus 176 -----~~~~~~~~~~~~-~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~ 249 (276)
T 3hxk_A 176 -----SEYNISEKVTSS-TPPTFIWHTADDEGVPIYNSLKYCDRLSKHQVPFEAHFFESGPHGVSLANRTTAPSDAYCLP 249 (276)
T ss_dssp -----GGGBTTTTCCTT-SCCEEEEEETTCSSSCTHHHHHHHHHHHTTTCCEEEEEESCCCTTCTTCSTTSCSSSTTCCH
T ss_pred -----hhCChhhccccC-CCCEEEEecCCCceeChHHHHHHHHHHHHcCCCeEEEEECCCCCCccccCccccccccccCc
Confidence 022233345667 5999999999999999999988888763 358999999999876533
Q ss_pred chhHHHHHHHHHHHhhh
Q 020064 312 IAAELVATNEKLKNLIK 328 (331)
Q Consensus 312 ~~~~~~~~i~~fl~~~~ 328 (331)
..+++.+.+.+||++..
T Consensus 250 ~~~~~~~~~~~wl~~~~ 266 (276)
T 3hxk_A 250 SVHRWVSWASDWLERQI 266 (276)
T ss_dssp HHHTHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhCc
Confidence 24788999999998765
|
| >1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=2e-25 Score=181.55 Aligned_cols=233 Identities=17% Similarity=0.121 Sum_probs=148.8
Q ss_pred CccceeEeCCCceEEEEeCCC----CCCCcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCC---C----
Q 020064 22 YSTGILKVSDIHTIYWEQSGN----PTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHA---C---- 90 (331)
Q Consensus 22 ~~~~~~~~~~g~~l~~~~~g~----~~~~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~---~---- 90 (331)
.+...+...+|.++.++...+ .+.|+||++||++++..++.....+++.||.|+++|+||+|.|.... .
T Consensus 68 ~~~~~~~~~dg~~i~~~~~~P~~~~~~~p~vv~~HG~g~~~~~~~~~~~l~~~G~~v~~~d~rG~g~s~~~~~~~~~p~~ 147 (337)
T 1vlq_A 68 AYDVTFSGYRGQRIKGWLLVPKLEEEKLPCVVQYIGYNGGRGFPHDWLFWPSMGYICFVMDTRGQGSGWLKGDTPDYPEG 147 (337)
T ss_dssp EEEEEEECGGGCEEEEEEEEECCSCSSEEEEEECCCTTCCCCCGGGGCHHHHTTCEEEEECCTTCCCSSSCCCCCBCCSS
T ss_pred EEEEEEEcCCCCEEEEEEEecCCCCCCccEEEEEcCCCCCCCCchhhcchhhCCCEEEEecCCCCCCcccCCCCcccccc
Confidence 344455666787777654422 23478999999877766666666777799999999999999764321 0
Q ss_pred ----------------CCccchHHHHHHHHHHHHHh------CCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEecccc
Q 020064 91 ----------------LDQNTTWDLIDDIEKLRQHL------EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFL 148 (331)
Q Consensus 91 ----------------~~~~~~~~~~~~~~~~~~~~------~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~ 148 (331)
...+.+....+|+..+++.+ +.++++++|||+||.+++.+|..+| +++++|+++|..
T Consensus 148 ~~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p-~v~~~vl~~p~~ 226 (337)
T 1vlq_A 148 PVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSK-KAKALLCDVPFL 226 (337)
T ss_dssp SBCCCCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCS-SCCEEEEESCCS
T ss_pred cCCCCCCcccccCCCCHHHhHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeCHHHHHHHHHHhcCC-CccEEEECCCcc
Confidence 01234457778888777776 2358999999999999999999998 699999988754
Q ss_pred chhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcC
Q 020064 149 LRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRG 228 (331)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (331)
........ .....+ ...+ ..+.. .. +..
T Consensus 227 ~~~~~~~~----------------~~~~~~---~~~~--------------------~~~~~-----~~----~~~---- 254 (337)
T 1vlq_A 227 CHFRRAVQ----------------LVDTHP---YAEI--------------------TNFLK-----TH----RDK---- 254 (337)
T ss_dssp CCHHHHHH----------------HCCCTT---HHHH--------------------HHHHH-----HC----TTC----
T ss_pred cCHHHHHh----------------cCCCcc---hHHH--------------------HHHHH-----hC----chh----
Confidence 32111000 000000 0000 00000 00 000
Q ss_pred CccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCC-CCcEEEecCCCCCC
Q 020064 229 EDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWP-EADFKVVADAGHSA 307 (331)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~ 307 (331)
....+.... ..+....+.++ ++|+|+++|++|.++|++.+..+.+.++ ++++++++++||..
T Consensus 255 ----~~~~~~~~~------------~~~~~~~~~~i-~~P~lii~G~~D~~~p~~~~~~~~~~l~~~~~~~~~~~~gH~~ 317 (337)
T 1vlq_A 255 ----EEIVFRTLS------------YFDGVNFAARA-KIPALFSVGLMDNICPPSTVFAAYNYYAGPKEIRIYPYNNHEG 317 (337)
T ss_dssp ----HHHHHHHHH------------TTCHHHHHTTC-CSCEEEEEETTCSSSCHHHHHHHHHHCCSSEEEEEETTCCTTT
T ss_pred ----HHHHHHhhh------------hccHHHHHHHc-CCCEEEEeeCCCCCCCchhHHHHHHhcCCCcEEEEcCCCCCCC
Confidence 000000000 12233456778 5999999999999999999999999987 48899999999996
Q ss_pred CcCCchhHHHHHHHHHHHhhh
Q 020064 308 NEPGIAAELVATNEKLKNLIK 328 (331)
Q Consensus 308 ~~~~~~~~~~~~i~~fl~~~~ 328 (331)
.. ++..+.+.+|+.+..
T Consensus 318 ~~----~~~~~~~~~fl~~~l 334 (337)
T 1vlq_A 318 GG----SFQAVEQVKFLKKLF 334 (337)
T ss_dssp TH----HHHHHHHHHHHHHHH
T ss_pred cc----hhhHHHHHHHHHHHH
Confidence 43 334566666666543
|
| >4fle_A Esterase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein, rossmann fold, HY; 2.10A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.8e-26 Score=173.66 Aligned_cols=185 Identities=9% Similarity=-0.012 Sum_probs=121.7
Q ss_pred CCcEEEeccCCCCCCCCC---cccccC--CCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCcEEEEE
Q 020064 45 GHPVVFLHGGPGGGTTPS---NRRFFD--PDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFG 119 (331)
Q Consensus 45 ~~~vl~~HG~~~~~~~~~---~~~~~~--~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG 119 (331)
.|+|||+||+.++...+. +...+. ..+|+|+++|+||+|. +..+++..+++....++++|+|
T Consensus 2 mptIl~lHGf~ss~~s~k~~~l~~~~~~~~~~~~v~~pdl~~~g~-------------~~~~~l~~~~~~~~~~~i~l~G 68 (202)
T 4fle_A 2 MSTLLYIHGFNSSPSSAKATTFKSWLQQHHPHIEMQIPQLPPYPA-------------EAAEMLESIVMDKAGQSIGIVG 68 (202)
T ss_dssp -CEEEEECCTTCCTTCHHHHHHHHHHHHHCTTSEEECCCCCSSHH-------------HHHHHHHHHHHHHTTSCEEEEE
T ss_pred CcEEEEeCCCCCCCCccHHHHHHHHHHHcCCCcEEEEeCCCCCHH-------------HHHHHHHHHHHhcCCCcEEEEE
Confidence 378999999876654321 222222 2469999999999873 4577788888888989999999
Q ss_pred eChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhccccCCCchH
Q 020064 120 GSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKE 199 (331)
Q Consensus 120 ~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (331)
|||||.+|+.+|.++|..+..++...++...... .... .. .........
T Consensus 69 ~SmGG~~a~~~a~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~---~~---------~~~~~~~~~ 117 (202)
T 4fle_A 69 SSLGGYFATWLSQRFSIPAVVVNPAVRPFELLSD-------------------YLGE---NQ---------NPYTGQKYV 117 (202)
T ss_dssp ETHHHHHHHHHHHHTTCCEEEESCCSSHHHHGGG-------------------GCEE---EE---------CTTTCCEEE
T ss_pred EChhhHHHHHHHHHhcccchheeeccchHHHHHH-------------------hhhh---hc---------ccccccccc
Confidence 9999999999999999887777665543211000 0000 00 000000000
Q ss_pred HHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCCCc
Q 020064 200 TQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVC 279 (331)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~ 279 (331)
.... +... .........++ ++|+|+|+|++|.+
T Consensus 118 --------------------~~~~---------~~~~-----------------~~~~~~~~~~~-~~P~LiihG~~D~~ 150 (202)
T 4fle_A 118 --------------------LESR---------HIYD-----------------LKAMQIEKLES-PDLLWLLQQTGDEV 150 (202)
T ss_dssp --------------------ECHH---------HHHH-----------------HHTTCCSSCSC-GGGEEEEEETTCSS
T ss_pred --------------------chHH---------HHHH-----------------HHhhhhhhhcc-CceEEEEEeCCCCC
Confidence 0000 0000 01112234566 59999999999999
Q ss_pred cCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHh
Q 020064 280 CPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNL 326 (331)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 326 (331)
||++.++++ ++++++++++|+||.+ +. .+++.+.|.+||+.
T Consensus 151 Vp~~~s~~l---~~~~~l~i~~g~~H~~--~~-~~~~~~~I~~FL~~ 191 (202)
T 4fle_A 151 LDYRQAVAY---YTPCRQTVESGGNHAF--VG-FDHYFSPIVTFLGL 191 (202)
T ss_dssp SCHHHHHHH---TTTSEEEEESSCCTTC--TT-GGGGHHHHHHHHTC
T ss_pred CCHHHHHHH---hhCCEEEEECCCCcCC--CC-HHHHHHHHHHHHhh
Confidence 998777655 5789999999999975 33 67789999999973
|
| >1auo_A Carboxylesterase; hydrolase; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.14 PDB: 1aur_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=3.5e-26 Score=174.23 Aligned_cols=176 Identities=12% Similarity=0.067 Sum_probs=130.9
Q ss_pred CCCCCCcEEEeccCCCCC-CCCCcccccCC--CCcEEEEecCC-------------------CCCCCCCCCCCCccchHH
Q 020064 41 GNPTGHPVVFLHGGPGGG-TTPSNRRFFDP--DFYRIILFDQR-------------------GAGKSTPHACLDQNTTWD 98 (331)
Q Consensus 41 g~~~~~~vl~~HG~~~~~-~~~~~~~~~~~--~g~~vi~~D~~-------------------G~G~s~~~~~~~~~~~~~ 98 (331)
+.++.|+||++||++++. .+......+.+ .||+|+++|+| |+|.+... ...++++
T Consensus 10 ~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~~~---~~~~~~~ 86 (218)
T 1auo_A 10 AKPADACVIWLHGLGADRYDFMPVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPARSI---SLEELEV 86 (218)
T ss_dssp SSCCSEEEEEECCTTCCTTTTHHHHHHHHTTCTTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSCEE---CHHHHHH
T ss_pred CCCCCcEEEEEecCCCChhhHHHHHHHHhhcCCceEEEeCCCCCccccCCCCCcccceecCcCCCccccc---chHHHHH
Confidence 344678999999976664 44455666665 89999998766 44543221 3467788
Q ss_pred HHHHHHHHHHHh---CC--CcEEEEEeChhHHHHHHHHH-hCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHh
Q 020064 99 LIDDIEKLRQHL---EI--PEWQVFGGSWGSTLALAYSL-AHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWES 172 (331)
Q Consensus 99 ~~~~~~~~~~~~---~~--~~v~lvG~S~Gg~~a~~~a~-~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (331)
.++++..+++.+ +. ++++++|||+||.+++.+|. ++|++++++|++++.....
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~~--------------------- 145 (218)
T 1auo_A 87 SAKMVTDLIEAQKRTGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPTF--------------------- 145 (218)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESCCCTTC---------------------
T ss_pred HHHHHHHHHHHHHHcCCCcccEEEEEECHHHHHHHHHHHhcCCCCccEEEEECCCCCCc---------------------
Confidence 899999998887 44 48999999999999999999 9999999999999854310
Q ss_pred hhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCC
Q 020064 173 FRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFP 252 (331)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (331)
.+. .
T Consensus 146 ---~~~------------~------------------------------------------------------------- 149 (218)
T 1auo_A 146 ---GDE------------L------------------------------------------------------------- 149 (218)
T ss_dssp ---CTT------------C-------------------------------------------------------------
T ss_pred ---hhh------------h-------------------------------------------------------------
Confidence 000 0
Q ss_pred CcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCC----CCcEEEecCCCCCCCcCCchhHHHHHHHHHH
Q 020064 253 SDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWP----EADFKVVADAGHSANEPGIAAELVATNEKLK 324 (331)
Q Consensus 253 ~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl 324 (331)
.. ....+ ++|+|+++|++|.++|++.++.+.+.++ ++++++++ +||.+..+. ++++.+.|.+++
T Consensus 150 -~~----~~~~~-~~P~l~i~G~~D~~~~~~~~~~~~~~l~~~g~~~~~~~~~-~gH~~~~~~-~~~~~~~l~~~l 217 (218)
T 1auo_A 150 -EL----SASQQ-RIPALCLHGQYDDVVQNAMGRSAFEHLKSRGVTVTWQEYP-MGHEVLPQE-IHDIGAWLAARL 217 (218)
T ss_dssp -CC----CHHHH-TCCEEEEEETTCSSSCHHHHHHHHHHHHTTTCCEEEEEES-CSSSCCHHH-HHHHHHHHHHHH
T ss_pred -hh----hhccc-CCCEEEEEeCCCceecHHHHHHHHHHHHhCCCceEEEEec-CCCccCHHH-HHHHHHHHHHHh
Confidence 00 01234 6999999999999999998999988886 48899999 999987764 655555555544
|
| >3cn9_A Carboxylesterase; alpha/beta hydrolase fold super-family, hydrolase; HET: 2PE; 2.09A {Pseudomonas aeruginosa} PDB: 3cn7_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.1e-25 Score=172.55 Aligned_cols=173 Identities=14% Similarity=0.091 Sum_probs=130.9
Q ss_pred CCCCCCcEEEeccCCCCCC-CCCcccccCC--CCcEEEEecCC-------------------CCCCCCCCCCCCccchHH
Q 020064 41 GNPTGHPVVFLHGGPGGGT-TPSNRRFFDP--DFYRIILFDQR-------------------GAGKSTPHACLDQNTTWD 98 (331)
Q Consensus 41 g~~~~~~vl~~HG~~~~~~-~~~~~~~~~~--~g~~vi~~D~~-------------------G~G~s~~~~~~~~~~~~~ 98 (331)
++++.|+||++||++++.. +...+..+.+ .||.|+++|+| |+|.+... ...++++
T Consensus 20 ~~~~~~~vv~lHG~~~~~~~~~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~~~---~~~~~~~ 96 (226)
T 3cn9_A 20 APNADACIIWLHGLGADRTDFKPVAEALQMVLPSTRFILPQAPSQAVTVNGGWVMPSWYDILAFSPARAI---DEDQLNA 96 (226)
T ss_dssp CTTCCEEEEEECCTTCCGGGGHHHHHHHHHHCTTEEEEECCCCEEECGGGTSCEEECSSCBCCSSSTTCB---CHHHHHH
T ss_pred CCCCCCEEEEEecCCCChHHHHHHHHHHhhcCCCcEEEeecCCCCccccCCCCccccccccccccccccc---cchhHHH
Confidence 4446789999999776644 4445555654 89999998776 56644322 3567888
Q ss_pred HHHHHHHHHHHh---CC--CcEEEEEeChhHHHHHHHHH-hCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHh
Q 020064 99 LIDDIEKLRQHL---EI--PEWQVFGGSWGSTLALAYSL-AHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWES 172 (331)
Q Consensus 99 ~~~~~~~~~~~~---~~--~~v~lvG~S~Gg~~a~~~a~-~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (331)
.++++..+++.+ +. ++++++|||+||.+++.+|. ++|++++++|++++.......
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~~~~------------------- 157 (226)
T 3cn9_A 97 SADQVIALIDEQRAKGIAAERIILAGFSQGGAVVLHTAFRRYAQPLGGVLALSTYAPTFDD------------------- 157 (226)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHTCSSCCSEEEEESCCCGGGGG-------------------
T ss_pred HHHHHHHHHHHHHHcCCCcccEEEEEECHHHHHHHHHHHhcCccCcceEEEecCcCCCchh-------------------
Confidence 999999999887 55 58999999999999999999 999999999999985432100
Q ss_pred hhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCC
Q 020064 173 FRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFP 252 (331)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (331)
+ .
T Consensus 158 ----------------~--~------------------------------------------------------------ 159 (226)
T 3cn9_A 158 ----------------L--A------------------------------------------------------------ 159 (226)
T ss_dssp ----------------C--C------------------------------------------------------------
T ss_pred ----------------h--h------------------------------------------------------------
Confidence 0 0
Q ss_pred CcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCC----CCcEEEecCCCCCCCcCCchhHHHHHHHHHHHh
Q 020064 253 SDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWP----EADFKVVADAGHSANEPGIAAELVATNEKLKNL 326 (331)
Q Consensus 253 ~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 326 (331)
. ....+ ++|+|+++|++|.++|++.++.+.+.++ ++++++++ +||.+..+. + +.+.+||++
T Consensus 160 -~-----~~~~~-~~P~lii~G~~D~~~~~~~~~~~~~~l~~~g~~~~~~~~~-~gH~~~~~~-~----~~i~~~l~~ 224 (226)
T 3cn9_A 160 -L-----DERHK-RIPVLHLHGSQDDVVDPALGRAAHDALQAQGVEVGWHDYP-MGHEVSLEE-I----HDIGAWLRK 224 (226)
T ss_dssp -C-----CTGGG-GCCEEEEEETTCSSSCHHHHHHHHHHHHHTTCCEEEEEES-CCSSCCHHH-H----HHHHHHHHH
T ss_pred -h-----ccccc-CCCEEEEecCCCCccCHHHHHHHHHHHHHcCCceeEEEec-CCCCcchhh-H----HHHHHHHHh
Confidence 0 01234 6999999999999999999998888885 58999999 999986653 4 456666654
|
| >1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32 | Back alignment and structure |
|---|
Probab=99.93 E-value=6.8e-26 Score=178.72 Aligned_cols=209 Identities=13% Similarity=0.094 Sum_probs=138.4
Q ss_pred EEeCCCCCCCcEEEeccCCC-----CC-CCCCccccc----CCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHH
Q 020064 37 WEQSGNPTGHPVVFLHGGPG-----GG-TTPSNRRFF----DPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKL 106 (331)
Q Consensus 37 ~~~~g~~~~~~vl~~HG~~~-----~~-~~~~~~~~~----~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~ 106 (331)
|...+.++.|+||++||++. +. .|..++..+ .+.||+|+++|+|+.+.+. .....+++.+.+..+
T Consensus 33 ~~~~~~~~~p~vv~lHGgg~~~g~~~~~~~~~~~~~L~~~a~~~g~~vi~~d~r~~~~~~-----~~~~~~d~~~~~~~l 107 (273)
T 1vkh_A 33 FQEISQNTREAVIYIHGGAWNDPENTPNDFNQLANTIKSMDTESTVCQYSIEYRLSPEIT-----NPRNLYDAVSNITRL 107 (273)
T ss_dssp EECCCTTCCEEEEEECCSTTTCTTCCGGGGHHHHHHHHHHCTTCCEEEEEECCCCTTTSC-----TTHHHHHHHHHHHHH
T ss_pred CCCCCCCCCeEEEEECCCcccCCcCChHHHHHHHHHHhhhhccCCcEEEEeecccCCCCC-----CCcHHHHHHHHHHHH
Confidence 33334446788999999542 22 233344555 5789999999999876543 234677888888888
Q ss_pred HHHhCCCcEEEEEeChhHHHHHHHHHhC-----------------CCceeeEEEeccccchhhhhhhHhhcccccCChhh
Q 020064 107 RQHLEIPEWQVFGGSWGSTLALAYSLAH-----------------PDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDA 169 (331)
Q Consensus 107 ~~~~~~~~v~lvG~S~Gg~~a~~~a~~~-----------------p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (331)
++.++.++++|+||||||.+++.++.++ |++++++|++++..........
T Consensus 108 ~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~~~~~~~~~~v~~~v~~~~~~~~~~~~~~------------- 174 (273)
T 1vkh_A 108 VKEKGLTNINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGIYSLKELLIE------------- 174 (273)
T ss_dssp HHHHTCCCEEEEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTTEEEEEEESCCCCHHHHHHH-------------
T ss_pred HHhCCcCcEEEEEeCHHHHHHHHHHHHhccCCccccccccccccCCcccceeeeecccccHHHhhhh-------------
Confidence 8888989999999999999999999986 7899999999876543211000
Q ss_pred HHhhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccC
Q 020064 170 WESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKG 249 (331)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (331)
.. ....+..... ........ .... . .
T Consensus 175 -------~~--~~~~~~~~~~----------------------------~~~~~~~~---~~~~-~-~------------ 200 (273)
T 1vkh_A 175 -------YP--EYDCFTRLAF----------------------------PDGIQMYE---EEPS-R-V------------ 200 (273)
T ss_dssp -------CG--GGHHHHHHHC----------------------------TTCGGGCC---CCHH-H-H------------
T ss_pred -------cc--cHHHHHHHHh----------------------------cccccchh---hccc-c-c------------
Confidence 00 0000000000 00000000 0000 0 0
Q ss_pred CCCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCC----CCcEEEecCCCCCCCcCCchhHHHHHHHHHH
Q 020064 250 FFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWP----EADFKVVADAGHSANEPGIAAELVATNEKLK 324 (331)
Q Consensus 250 ~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl 324 (331)
.......+..+ ++|+|+++|++|.++|++.++.+.+.++ ++++++++++||....+. +++.+.|.+|+
T Consensus 201 ----~~~~~~~~~~~-~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~~~~~--~~~~~~i~~fl 272 (273)
T 1vkh_A 201 ----MPYVKKALSRF-SIDMHLVHSYSDELLTLRQTNCLISCLQDYQLSFKLYLDDLGLHNDVYKN--GKVAKYIFDNI 272 (273)
T ss_dssp ----HHHHHHHHHHH-TCEEEEEEETTCSSCCTHHHHHHHHHHHHTTCCEEEEEECCCSGGGGGGC--HHHHHHHHHTC
T ss_pred ----Chhhhhccccc-CCCEEEEecCCcCCCChHHHHHHHHHHHhcCCceEEEEeCCCcccccccC--hHHHHHHHHHc
Confidence 00011123336 5999999999999999999998888774 478999999999998875 88888888886
|
| >2k2q_B Surfactin synthetase thioesterase subunit; A/B-hydrolase, NRPS, non-ribosomal peptide synthetase, type II thioesterase, antibiotic biosynthesis; NMR {Bacillus subtilis} PDB: 2ron_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1.7e-26 Score=178.81 Aligned_cols=223 Identities=14% Similarity=0.132 Sum_probs=128.4
Q ss_pred EeCCCCCCCcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCC---Cc
Q 020064 38 EQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEI---PE 114 (331)
Q Consensus 38 ~~~g~~~~~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 114 (331)
..+..+++++|||+||++++...|......+..+|+|+++|+||||.|.... .+++.+.+..+++.++. ++
T Consensus 6 ~~~~~~~~~~lv~lhg~g~~~~~~~~~~~~L~~~~~vi~~Dl~GhG~S~~~~------~~~~~~~~~~~~~~l~~~~~~~ 79 (242)
T 2k2q_B 6 KSFDASEKTQLICFPFAGGYSASFRPLHAFLQGECEMLAAEPPGHGTNQTSA------IEDLEELTDLYKQELNLRPDRP 79 (242)
T ss_dssp CCCSTTCCCEEESSCCCCHHHHHHHHHHHHHCCSCCCEEEECCSSCCSCCCT------TTHHHHHHHHTTTTCCCCCCSS
T ss_pred cCCCCCCCceEEEECCCCCCHHHHHHHHHhCCCCeEEEEEeCCCCCCCCCCC------cCCHHHHHHHHHHHHHhhcCCC
Confidence 3444456788999999777654444333334668999999999999996432 33455555555566665 68
Q ss_pred EEEEEeChhHHHHHHHHHh------CCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHh
Q 020064 115 WQVFGGSWGSTLALAYSLA------HPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDA 188 (331)
Q Consensus 115 v~lvG~S~Gg~~a~~~a~~------~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (331)
++|+||||||.+|+.+|.+ +|++ +++.+........ .. . ... ....+...
T Consensus 80 ~~lvGhSmGG~iA~~~A~~~~~~~~~p~~---v~l~~~~~~~~~~-------~~--~---------~~~---~~~~~~~~ 135 (242)
T 2k2q_B 80 FVLFGHSMGGMITFRLAQKLEREGIFPQA---VIISAIQPPHIQR-------KK--V---------SHL---PDDQFLDH 135 (242)
T ss_dssp CEEECCSSCCHHHHHHHHHHHHHHCSSCS---EEEEEEECSCCCS-------CC--C---------SSC---TTHHHHHT
T ss_pred EEEEeCCHhHHHHHHHHHHHHHcCCCCCE---EEEECCCCCCCCc-------cc--c---------cCC---CHHHHHHH
Confidence 9999999999999999987 5554 3433321110000 00 0 000 00001111
Q ss_pred hccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhcccccccc
Q 020064 189 YSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHIN 268 (331)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P 268 (331)
+............. ++... .....+...+... . .... ..+.++ ++|
T Consensus 136 ~~~~~~~~~~~~~~-------------------~~~~~-~~~~~~~~~~~~~-------~-----~~~~-~~l~~i-~~P 181 (242)
T 2k2q_B 136 IIQLGGMPAELVEN-------------------KEVMS-FFLPSFRSDYRAL-------E-----QFEL-YDLAQI-QSP 181 (242)
T ss_dssp TCCTTCCCCTTTHH-------------------HHTTT-TCCSCHHHHHHHH-------T-----CCCC-SCCTTC-CCS
T ss_pred HHHhCCCChHHhcC-------------------HHHHH-HHHHHHHHHHHHH-------H-----hccc-CCCCcc-CCC
Confidence 10000000000000 00000 0000011111100 0 0011 126678 699
Q ss_pred EEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhh
Q 020064 269 ATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNLI 327 (331)
Q Consensus 269 ~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 327 (331)
+|+|+|++|.+++ .....+.+..++.++++++ +||+++.++ |+++++.|.+|+++.
T Consensus 182 ~lvi~G~~D~~~~-~~~~~~~~~~~~~~~~~~~-~gH~~~~e~-p~~~~~~i~~fl~~~ 237 (242)
T 2k2q_B 182 VHVFNGLDDKKCI-RDAEGWKKWAKDITFHQFD-GGHMFLLSQ-TEEVAERIFAILNQH 237 (242)
T ss_dssp EEEEEECSSCCHH-HHHHHHHTTCCCSEEEEEE-CCCSHHHHH-CHHHHHHHHHHHHTT
T ss_pred EEEEeeCCCCcCH-HHHHHHHHHhcCCeEEEEe-CCceeEcCC-HHHHHHHHHHHhhcc
Confidence 9999999999875 4456677777888888898 599999886 999999999999764
|
| >1kez_A Erythronolide synthase; polyketide synthase, modular polyketide synthase, thioesterase, 6-DEB, TE, DEBS, alpha, beta-hydrolase; 2.80A {Saccharopolyspora erythraea} SCOP: c.69.1.22 PDB: 1mo2_A | Back alignment and structure |
|---|
Probab=99.93 E-value=2e-25 Score=178.21 Aligned_cols=210 Identities=14% Similarity=0.092 Sum_probs=135.9
Q ss_pred CCCCcEEEeccCCCCC--CCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHH-HHHHHhCCCcEEEEE
Q 020064 43 PTGHPVVFLHGGPGGG--TTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIE-KLRQHLEIPEWQVFG 119 (331)
Q Consensus 43 ~~~~~vl~~HG~~~~~--~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~lvG 119 (331)
+++++|||+||++++. ..|......+..+|+|+++|+||||.|... .++++++++++. .+++.++.++++|+|
T Consensus 65 ~~~~~lvllhG~~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~----~~~~~~~a~~~~~~l~~~~~~~~~~LvG 140 (300)
T 1kez_A 65 PGEVTVICCAGTAAISGPHEFTRLAGALRGIAPVRAVPQPGYEEGEPL----PSSMAAVAAVQADAVIRTQGDKPFVVAG 140 (300)
T ss_dssp SCSSEEEECCCSSTTCSTTTTHHHHHHTSSSCCBCCCCCTTSSTTCCB----CSSHHHHHHHHHHHHHHHCSSCCEEEEC
T ss_pred CCCCeEEEECCCcccCcHHHHHHHHHhcCCCceEEEecCCCCCCCCCC----CCCHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 3678999999977654 444433444456799999999999998754 368999999987 567788888999999
Q ss_pred eChhHHHHHHHHHhCC---CceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhccccCCC
Q 020064 120 GSWGSTLALAYSLAHP---DKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSD 196 (331)
Q Consensus 120 ~S~Gg~~a~~~a~~~p---~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (331)
|||||.+++.+|.++| ++++++|++++....... ....+ ...+...+...
T Consensus 141 hS~GG~vA~~~A~~~p~~g~~v~~lvl~~~~~~~~~~---------------~~~~~------------~~~~~~~~~~~ 193 (300)
T 1kez_A 141 HSAGALMAYALATELLDRGHPPRGVVLIDVYPPGHQD---------------AMNAW------------LEELTATLFDR 193 (300)
T ss_dssp CTHHHHHHHHHHHHTTTTTCCCSEEECBTCCCTTTCH---------------HHHHH------------HHHHHGGGCCC
T ss_pred ECHhHHHHHHHHHHHHhcCCCccEEEEECCCCCcchh---------------HHHHH------------HHHHHHHHHhC
Confidence 9999999999999988 489999999986542110 00000 00000000000
Q ss_pred chHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCC
Q 020064 197 DKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRY 276 (331)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~ 276 (331)
.. .... ......+.. ++... . .. .+..+ ++|+|+|+|+
T Consensus 194 ~~-------------------~~~~---------~~~~~~~~~----~~~~~---~-~~----~~~~i-~~P~lii~G~- 231 (300)
T 1kez_A 194 ET-------------------VRMD---------DTRLTALGA----YDRLT---G-QW----RPRET-GLPTLLVSAG- 231 (300)
T ss_dssp CS-------------------SCCC---------HHHHHHHHH----HHHHT---T-TC----CCCCC-SCCBEEEEES-
T ss_pred cC-------------------Cccc---------hHHHHHHHH----HHHHH---h-cC----CCCCC-CCCEEEEEeC-
Confidence 00 0000 000000000 00000 0 00 23677 5999999995
Q ss_pred CCccCCcchHHHHHhCC-CCcEEEecCCCCCCCc-CCchhHHHHHHHHHHHhhh
Q 020064 277 DVCCPMMSAWDLHKAWP-EADFKVVADAGHSANE-PGIAAELVATNEKLKNLIK 328 (331)
Q Consensus 277 D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~-~~~~~~~~~~i~~fl~~~~ 328 (331)
|..+++.. ..+.+..+ +.+++++++ ||+.+. +. ++++.+.|.+|+++..
T Consensus 232 d~~~~~~~-~~~~~~~~~~~~~~~i~g-gH~~~~~e~-~~~~~~~i~~fl~~~~ 282 (300)
T 1kez_A 232 EPMGPWPD-DSWKPTWPFEHDTVAVPG-DHFTMVQEH-ADAIARHIDAWLGGGN 282 (300)
T ss_dssp SCSSCCCS-SCCSCCCSSCCEEEEESS-CTTTSSSSC-SHHHHHHHHHHHTCC-
T ss_pred CCCCCCcc-cchhhhcCCCCeEEEecC-CChhhcccc-HHHHHHHHHHHHHhcc
Confidence 55555544 34555555 579999998 999986 65 9999999999998764
|
| >2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.93 E-value=2.8e-26 Score=178.71 Aligned_cols=182 Identities=13% Similarity=0.072 Sum_probs=129.3
Q ss_pred EEEeCCCCCCCcEEEeccCCCCCCC-CCcccccCCCCcEEEEe--cCCCCCCCCCCCCC--Ccc---chHHHHHHHHHHH
Q 020064 36 YWEQSGNPTGHPVVFLHGGPGGGTT-PSNRRFFDPDFYRIILF--DQRGAGKSTPHACL--DQN---TTWDLIDDIEKLR 107 (331)
Q Consensus 36 ~~~~~g~~~~~~vl~~HG~~~~~~~-~~~~~~~~~~g~~vi~~--D~~G~G~s~~~~~~--~~~---~~~~~~~~~~~~~ 107 (331)
++...+.++.|+||++||++++... ..+...+ .++|.|+++ |++|+|.|...... ... +..+.++++.+++
T Consensus 53 ~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l-~~~~~v~~~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~l 131 (251)
T 2r8b_A 53 HKSRAGVAGAPLFVLLHGTGGDENQFFDFGARL-LPQATILSPVGDVSEHGAARFFRRTGEGVYDMVDLERATGKMADFI 131 (251)
T ss_dssp EEEECCCTTSCEEEEECCTTCCHHHHHHHHHHH-STTSEEEEECCSEEETTEEESSCBCGGGCBCHHHHHHHHHHHHHHH
T ss_pred EEEeCCCCCCcEEEEEeCCCCCHhHHHHHHHhc-CCCceEEEecCCcCCCCCcccccCCCCCcCCHHHHHHHHHHHHHHH
Confidence 4445554567899999997776444 3444444 456999999 89999987532110 112 2333345555544
Q ss_pred HH----hCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhh
Q 020064 108 QH----LEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERS 183 (331)
Q Consensus 108 ~~----~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (331)
+. ++.++++++|||+||.+++.+|.++|++++++|++++......
T Consensus 132 ~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~------------------------------- 180 (251)
T 2r8b_A 132 KANREHYQAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPFEP------------------------------- 180 (251)
T ss_dssp HHHHHHHTCCSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCCSCC-------------------------------
T ss_pred HHHHhccCCCcEEEEEECHHHHHHHHHHHhCCcccCeEEEEecCCCccc-------------------------------
Confidence 44 4888999999999999999999999999999999998543100
Q ss_pred hhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccc
Q 020064 184 CFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDN 263 (331)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 263 (331)
......
T Consensus 181 --------------------------------------------------------------------------~~~~~~ 186 (251)
T 2r8b_A 181 --------------------------------------------------------------------------KISPAK 186 (251)
T ss_dssp --------------------------------------------------------------------------CCCCCC
T ss_pred --------------------------------------------------------------------------cccccc
Confidence 000122
Q ss_pred cccccEEEEecCCCCccCCcchHHHHHhCC--CCcEE-EecCCCCCCCcCCchhHHHHHHHHHHHhhhc
Q 020064 264 IRHINATIVQGRYDVCCPMMSAWDLHKAWP--EADFK-VVADAGHSANEPGIAAELVATNEKLKNLIKN 329 (331)
Q Consensus 264 i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~--~~~~~-~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~~ 329 (331)
+ ++|+|+++|++|.++|++.++.+.+.++ +.++. +++++||.++.+. .+.+.+||++..+
T Consensus 187 ~-~~P~li~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~gH~~~~~~-----~~~~~~~l~~~l~ 249 (251)
T 2r8b_A 187 P-TRRVLITAGERDPICPVQLTKALEESLKAQGGTVETVWHPGGHEIRSGE-----IDAVRGFLAAYGG 249 (251)
T ss_dssp T-TCEEEEEEETTCTTSCHHHHHHHHHHHHHHSSEEEEEEESSCSSCCHHH-----HHHHHHHHGGGC-
T ss_pred c-CCcEEEeccCCCccCCHHHHHHHHHHHHHcCCeEEEEecCCCCccCHHH-----HHHHHHHHHHhcC
Confidence 4 5999999999999999999999999887 67776 7888999986654 4556667766543
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1.3e-25 Score=195.86 Aligned_cols=232 Identities=14% Similarity=0.129 Sum_probs=156.9
Q ss_pred CccceeEeCCCceEEEEeCCCC----CCCcEEEeccCCCC---CCCCCcccccCCCCcEEEEecCCC---CCCCCCC---
Q 020064 22 YSTGILKVSDIHTIYWEQSGNP----TGHPVVFLHGGPGG---GTTPSNRRFFDPDFYRIILFDQRG---AGKSTPH--- 88 (331)
Q Consensus 22 ~~~~~~~~~~g~~l~~~~~g~~----~~~~vl~~HG~~~~---~~~~~~~~~~~~~g~~vi~~D~~G---~G~s~~~--- 88 (331)
.+...+...+|.++.+....++ +.|+||++||++.+ ..+...+..+.++||.|+++|+|| +|.+...
T Consensus 333 ~~~~~~~~~~g~~i~~~~~~p~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~G~s~~~~~~ 412 (582)
T 3o4h_A 333 SRLVWVESFDGSRVPTYVLESGRAPTPGPTVVLVHGGPFAEDSDSWDTFAASLAAAGFHVVMPNYRGSTGYGEEWRLKII 412 (582)
T ss_dssp EEEEEEECTTSCEEEEEEEEETTSCSSEEEEEEECSSSSCCCCSSCCHHHHHHHHTTCEEEEECCTTCSSSCHHHHHTTT
T ss_pred ceEEEEECCCCCEEEEEEEcCCCCCCCCcEEEEECCCcccccccccCHHHHHHHhCCCEEEEeccCCCCCCchhHHhhhh
Confidence 3455667778878877655432 45789999996554 334556666777999999999999 6655211
Q ss_pred CCCCccchHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChh
Q 020064 89 ACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPD 168 (331)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (331)
........+++.+.+..+++....++++++|||+||.+++.+|.++|++++++|++++........
T Consensus 413 ~~~~~~~~~d~~~~~~~l~~~~~~d~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~-------------- 478 (582)
T 3o4h_A 413 GDPCGGELEDVSAAARWARESGLASELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASVVDWEEMY-------------- 478 (582)
T ss_dssp TCTTTHHHHHHHHHHHHHHHTTCEEEEEEEEETHHHHHHHHHHHHSTTTSSCEEEESCCCCHHHHH--------------
T ss_pred hhcccccHHHHHHHHHHHHhCCCcceEEEEEECHHHHHHHHHHhcCCCceEEEEEcCCccCHHHHh--------------
Confidence 111234456666666666666444599999999999999999999999999999999865422100
Q ss_pred hHHhhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhcc
Q 020064 169 AWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNK 248 (331)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (331)
.... .....+...... ...+.+.
T Consensus 479 ------~~~~-~~~~~~~~~~~~----------------------------~~~~~~~---------------------- 501 (582)
T 3o4h_A 479 ------ELSD-AAFRNFIEQLTG----------------------------GSREIMR---------------------- 501 (582)
T ss_dssp ------HTCC-HHHHHHHHHHTT----------------------------TCHHHHH----------------------
T ss_pred ------hccc-chhHHHHHHHcC----------------------------cCHHHHH----------------------
Confidence 0000 000000000000 0000000
Q ss_pred CCCCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCCC----CcEEEecCCCCCCCcCCchhHHHHHHHHHH
Q 020064 249 GFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPE----ADFKVVADAGHSANEPGIAAELVATNEKLK 324 (331)
Q Consensus 249 ~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~----~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl 324 (331)
.......+.++ ++|+|+++|++|..+|++.++.+.+.+++ +++++++++||.+.....++++.+.+.+||
T Consensus 502 -----~~sp~~~~~~i-~~P~lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl 575 (582)
T 3o4h_A 502 -----SRSPINHVDRI-KEPLALIHPQNASRTPLKPLLRLMGELLARGKTFEAHIIPDAGHAINTMEDAVKILLPAVFFL 575 (582)
T ss_dssp -----HTCGGGGGGGC-CSCEEEEEETTCSSSCHHHHHHHHHHHHHTTCCEEEEEETTCCSSCCBHHHHHHHHHHHHHHH
T ss_pred -----hcCHHHHHhcC-CCCEEEEecCCCCCcCHHHHHHHHHHHHhCCCCEEEEEECCCCCCCCChHHHHHHHHHHHHHH
Confidence 11123456778 59999999999999999999988888743 789999999999974334889999999999
Q ss_pred HhhhcC
Q 020064 325 NLIKNG 330 (331)
Q Consensus 325 ~~~~~~ 330 (331)
++..++
T Consensus 576 ~~~l~~ 581 (582)
T 3o4h_A 576 ATQRER 581 (582)
T ss_dssp HHHHTC
T ss_pred HHHcCC
Confidence 987654
|
| >2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.93 E-value=3.2e-25 Score=182.48 Aligned_cols=123 Identities=11% Similarity=-0.026 Sum_probs=90.9
Q ss_pred cceeEeCCCceEEEEeC---C--CCCCCcEEEeccCCCCCCCC-C-cccccCCCCcEEEEecCCCCCCCCCCCCCCccch
Q 020064 24 TGILKVSDIHTIYWEQS---G--NPTGHPVVFLHGGPGGGTTP-S-NRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTT 96 (331)
Q Consensus 24 ~~~~~~~~g~~l~~~~~---g--~~~~~~vl~~HG~~~~~~~~-~-~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~ 96 (331)
...+...+|.++.+... + ..+.|+||++||++++...+ . +...+.++||.|+++|+||+|.|..... ...+.
T Consensus 70 ~~~~~~~~g~~~~~~~~~p~~~~~~~~p~vv~~hG~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~-~~~~~ 148 (367)
T 2hdw_A 70 KVTFANRYGITLAADLYLPKNRGGDRLPAIVIGGPFGAVKEQSSGLYAQTMAERGFVTLAFDPSYTGESGGQPR-NVASP 148 (367)
T ss_dssp EEEEECTTSCEEEEEEEEESSCCSSCEEEEEEECCTTCCTTSHHHHHHHHHHHTTCEEEEECCTTSTTSCCSSS-SCCCH
T ss_pred EEEEecCCCCEEEEEEEeCCCCCCCCCCEEEEECCCCCcchhhHHHHHHHHHHCCCEEEEECCCCcCCCCCcCc-cccch
Confidence 34455667877776543 3 22457899999977665443 2 5666777899999999999999985442 12235
Q ss_pred HHHHHHHHHHHHHh------CCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEecccc
Q 020064 97 WDLIDDIEKLRQHL------EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFL 148 (331)
Q Consensus 97 ~~~~~~~~~~~~~~------~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~ 148 (331)
...++|+.++++.+ +.++++++|||+||.+++.+|..+| +++++|++++..
T Consensus 149 ~~~~~d~~~~~~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p-~~~~~v~~~p~~ 205 (367)
T 2hdw_A 149 DINTEDFSAAVDFISLLPEVNRERIGVIGICGWGGMALNAVAVDK-RVKAVVTSTMYD 205 (367)
T ss_dssp HHHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEESCCC
T ss_pred hhHHHHHHHHHHHHHhCcCCCcCcEEEEEECHHHHHHHHHHhcCC-CccEEEEecccc
Confidence 56677777766665 2458999999999999999999998 699999998753
|
| >3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.2e-25 Score=187.04 Aligned_cols=119 Identities=13% Similarity=0.065 Sum_probs=87.6
Q ss_pred eeEeCCCceEE---EEeCCCCCCCcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHH
Q 020064 26 ILKVSDIHTIY---WEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDD 102 (331)
Q Consensus 26 ~~~~~~g~~l~---~~~~g~~~~~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~ 102 (331)
.+++.+| .+. |...++...|+||++||++++ .+...+..+.++||.|+++|+||+|.+.... .....+++.+.
T Consensus 153 ~~~~~~g-~l~~~l~~P~~~~~~P~Vv~lhG~~~~-~~~~~a~~La~~Gy~Vla~D~rG~~~~~~~~--~~~~~~d~~~a 228 (446)
T 3hlk_A 153 REPVRVG-RVRGTLFLPPEPGPFPGIVDMFGTGGG-LLEYRASLLAGKGFAVMALAYYNYEDLPKTM--ETLHLEYFEEA 228 (446)
T ss_dssp EEEEEET-TEEEEEEECSSSCCBCEEEEECCSSCS-CCCHHHHHHHTTTCEEEEECCSSSTTSCSCC--SEEEHHHHHHH
T ss_pred EEEecCC-eEEEEEEeCCCCCCCCEEEEECCCCcc-hhhHHHHHHHhCCCEEEEeccCCCCCCCcch--hhCCHHHHHHH
Confidence 4444444 333 233333345789999997654 2233466777899999999999999887554 34567777777
Q ss_pred HHHHHHHhCC--CcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccc
Q 020064 103 IEKLRQHLEI--PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLL 149 (331)
Q Consensus 103 ~~~~~~~~~~--~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~ 149 (331)
+..+.+..+. ++++|+||||||.+++.+|..+|+ ++++|++++...
T Consensus 229 ~~~l~~~~~vd~~~i~l~G~S~GG~lAl~~A~~~p~-v~a~V~~~~~~~ 276 (446)
T 3hlk_A 229 MNYLLSHPEVKGPGVGLLGISKGGELCLSMASFLKG-ITAAVVINGSVA 276 (446)
T ss_dssp HHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSC-EEEEEEESCCSB
T ss_pred HHHHHhCCCCCCCCEEEEEECHHHHHHHHHHHhCCC-ceEEEEEcCccc
Confidence 7766665543 689999999999999999999997 999999988653
|
| >3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.93 E-value=9.3e-26 Score=174.64 Aligned_cols=202 Identities=12% Similarity=0.041 Sum_probs=142.1
Q ss_pred ceeEeCCCceEEEEeCCC----CCCCcEEEeccCCCCCC-CCCcccccCCCCcEEEEecCCCCCCCCCCCCC--------
Q 020064 25 GILKVSDIHTIYWEQSGN----PTGHPVVFLHGGPGGGT-TPSNRRFFDPDFYRIILFDQRGAGKSTPHACL-------- 91 (331)
Q Consensus 25 ~~~~~~~g~~l~~~~~g~----~~~~~vl~~HG~~~~~~-~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~-------- 91 (331)
..+.. +|.++.+....+ +..|+||++||+.+... +..++..+.++||.|+++|++|+|.+......
T Consensus 9 ~~~~~-~~~~~~~~~~~p~~~~~~~p~vv~~HG~~g~~~~~~~~~~~l~~~G~~v~~~d~~g~g~~~~~~~~~~~~~~~~ 87 (241)
T 3f67_A 9 TSIPS-QGENMPAYHARPKNADGPLPIVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPELYFRQGDPNEYHDIPTLFKEL 87 (241)
T ss_dssp EEEEE-TTEEEEEEEEEETTCCSCEEEEEEECCTTCSCHHHHHHHHHHHHTTCEEEEECTTTTTCCGGGCCSHHHHHHHT
T ss_pred EEEec-CCcceEEEEecCCCCCCCCCEEEEEcCcCccCHHHHHHHHHHHHCCcEEEEecccccCCCCCchhhHHHHHHHh
Confidence 34455 565776554432 12468999999666543 44556667779999999999999877543311
Q ss_pred -CccchHHHHHHHHHHHHHhC-----CCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccC
Q 020064 92 -DQNTTWDLIDDIEKLRQHLE-----IPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAI 165 (331)
Q Consensus 92 -~~~~~~~~~~~~~~~~~~~~-----~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~ 165 (331)
...+.....+|+.++++.+. .++++++|||+||.+++.++..+|+ +.+++++.+......
T Consensus 88 ~~~~~~~~~~~d~~~~~~~l~~~~~d~~~i~l~G~S~Gg~~a~~~a~~~~~-~~~~v~~~~~~~~~~------------- 153 (241)
T 3f67_A 88 VSKVPDAQVLADLDHVASWAARHGGDAHRLLITGFCWGGRITWLYAAHNPQ-LKAAVAWYGKLVGEK------------- 153 (241)
T ss_dssp GGGSCHHHHHHHHHHHHHHHHTTTEEEEEEEEEEETHHHHHHHHHHTTCTT-CCEEEEESCCCSCCC-------------
T ss_pred hhcCCchhhHHHHHHHHHHHHhccCCCCeEEEEEEcccHHHHHHHHhhCcC-cceEEEEeccccCCC-------------
Confidence 11234567888888887764 4589999999999999999999987 777776554321100
Q ss_pred ChhhHHhhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhh
Q 020064 166 YPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYF 245 (331)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (331)
....
T Consensus 154 -------------------------~~~~--------------------------------------------------- 157 (241)
T 3f67_A 154 -------------------------SLNS--------------------------------------------------- 157 (241)
T ss_dssp -------------------------CSSS---------------------------------------------------
T ss_pred -------------------------ccCC---------------------------------------------------
Confidence 0000
Q ss_pred hccCCCCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhC----CCCcEEEecCCCCCCCcC-------Cchh
Q 020064 246 LNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAW----PEADFKVVADAGHSANEP-------GIAA 314 (331)
Q Consensus 246 ~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~~-------~~~~ 314 (331)
..+....+.++ ++|+|+++|++|.++|++..+.+.+.+ ++++++++++++|.+..+ ...+
T Consensus 158 --------~~~~~~~~~~~-~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~ 228 (241)
T 3f67_A 158 --------PKHPVDIAVDL-NAPVLGLYGAKDASIPQDTVETMRQALRAANATAEIVVYPEADHAFNADYRASYHEESAK 228 (241)
T ss_dssp --------CCCHHHHGGGC-CSCEEEEEETTCTTSCHHHHHHHHHHHHHTTCSEEEEEETTCCTTTTCTTSTTCCHHHHH
T ss_pred --------ccCHHHhhhhc-CCCEEEEEecCCCCCCHHHHHHHHHHHHHcCCCcEEEEECCCCcceecCCCCCCCHHHHH
Confidence 11223355667 599999999999999998888888877 678999999999988532 1246
Q ss_pred HHHHHHHHHHHh
Q 020064 315 ELVATNEKLKNL 326 (331)
Q Consensus 315 ~~~~~i~~fl~~ 326 (331)
++.+.+.+||++
T Consensus 229 ~~~~~~~~fl~~ 240 (241)
T 3f67_A 229 DGWQRMLAWFAQ 240 (241)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHhh
Confidence 788889999864
|
| >3d7r_A Esterase; alpha/beta fold, hydrolase; 2.01A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.93 E-value=3.3e-25 Score=179.00 Aligned_cols=227 Identities=12% Similarity=0.076 Sum_probs=137.6
Q ss_pred CCceEEEEeCCCCCCCcEEEeccCCC---CC-CCCCcccccC-CCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHH
Q 020064 31 DIHTIYWEQSGNPTGHPVVFLHGGPG---GG-TTPSNRRFFD-PDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEK 105 (331)
Q Consensus 31 ~g~~l~~~~~g~~~~~~vl~~HG~~~---~~-~~~~~~~~~~-~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~ 105 (331)
+|..+++......+.|+||++||++. +. .++.++..+. +.||+|+++|+||.+... ....++++.+++..
T Consensus 82 ~~~~~~~~~p~~~~~p~vv~lHGgg~~~~~~~~~~~~~~~la~~~g~~vi~~D~r~~~~~~-----~~~~~~d~~~~~~~ 156 (326)
T 3d7r_A 82 DDMQVFRFNFRHQIDKKILYIHGGFNALQPSPFHWRLLDKITLSTLYEVVLPIYPKTPEFH-----IDDTFQAIQRVYDQ 156 (326)
T ss_dssp TTEEEEEEESTTCCSSEEEEECCSTTTSCCCHHHHHHHHHHHHHHCSEEEEECCCCTTTSC-----HHHHHHHHHHHHHH
T ss_pred CCEEEEEEeeCCCCCeEEEEECCCcccCCCCHHHHHHHHHHHHHhCCEEEEEeCCCCCCCC-----chHHHHHHHHHHHH
Confidence 44466644333245788999999652 22 2344455554 359999999999865432 23467788888888
Q ss_pred HHHHhCCCcEEEEEeChhHHHHHHHHHhCCCc----eeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcch
Q 020064 106 LRQHLEIPEWQVFGGSWGSTLALAYSLAHPDK----VTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENE 181 (331)
Q Consensus 106 ~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~----v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (331)
+++.++.++++|+|||+||.+++.+|.++|++ ++++|+++|........ +......
T Consensus 157 l~~~~~~~~i~l~G~S~GG~lAl~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~------------~~~~~~~-------- 216 (326)
T 3d7r_A 157 LVSEVGHQNVVVMGDGSGGALALSFVQSLLDNQQPLPNKLYLISPILDATLSN------------KDISDAL-------- 216 (326)
T ss_dssp HHHHHCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCC------------TTCCHHH--------
T ss_pred HHhccCCCcEEEEEECHHHHHHHHHHHHHHhcCCCCCCeEEEECcccccCcCC------------hhHHhhh--------
Confidence 88888989999999999999999999988776 99999999865421100 0000000
Q ss_pred hhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhc
Q 020064 182 RSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNI 261 (331)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 261 (331)
..... + ............|. .......+ ....+...+
T Consensus 217 -----~~~~~-~--~~~~~~~~~~~~~~-----~~~~~~~~------------------------------~~~~~~~~~ 253 (326)
T 3d7r_A 217 -----IEQDA-V--LSQFGVNEIMKKWA-----NGLPLTDK------------------------------RISPINGTI 253 (326)
T ss_dssp -----HHHCS-S--CCHHHHHHHHHHHH-----TTSCTTST------------------------------TTSGGGSCC
T ss_pred -----cccCc-c--cCHHHHHHHHHHhc-----CCCCCCCC------------------------------eECcccCCc
Confidence 00000 0 00000000000000 00000000 001111223
Q ss_pred cccccccEEEEecCCCCccCC--cchHHHHHhCCCCcEEEecCCCCCCCc---CCchhHHHHHHHHHHHhhh
Q 020064 262 DNIRHINATIVQGRYDVCCPM--MSAWDLHKAWPEADFKVVADAGHSANE---PGIAAELVATNEKLKNLIK 328 (331)
Q Consensus 262 ~~i~~~P~l~i~G~~D~~~~~--~~~~~~~~~~~~~~~~~~~~~gH~~~~---~~~~~~~~~~i~~fl~~~~ 328 (331)
..+ +|+|+++|++|..++. ...+.+.+..+++++++++++||.++. ++ ++++.+.|.+||++..
T Consensus 254 ~~~--~P~lii~G~~D~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~-~~~~~~~i~~fl~~~l 322 (326)
T 3d7r_A 254 EGL--PPVYMFGGGREMTHPDMKLFEQMMLQHHQYIEFYDYPKMVHDFPIYPIRQ-SHKAIKQIAKSIDEDV 322 (326)
T ss_dssp TTC--CCEEEEEETTSTTHHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGSSSHH-HHHHHHHHHHHHTSCC
T ss_pred ccC--CCEEEEEeCcccchHHHHHHHHHHHHCCCcEEEEEeCCCcccccccCCHH-HHHHHHHHHHHHHHHh
Confidence 333 6999999999986542 123344444567899999999999876 54 8899999999998654
|
| >3lcr_A Tautomycetin biosynthetic PKS; alpha-beta hydrolase, thioesterase, polyketide synthase, phosphopantetheine, transferase, hydrolase; 2.00A {Streptomyces SP} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.8e-24 Score=172.51 Aligned_cols=213 Identities=10% Similarity=-0.051 Sum_probs=136.8
Q ss_pred CCCcEEEeccC--CCCCCCC-CcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHh-CCCcEEEEE
Q 020064 44 TGHPVVFLHGG--PGGGTTP-SNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHL-EIPEWQVFG 119 (331)
Q Consensus 44 ~~~~vl~~HG~--~~~~~~~-~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~lvG 119 (331)
++|+|||+||+ +++...| .+...+ ..+|+|+++|+||||.+.... .+++++++++.++++.+ +.++++|+|
T Consensus 80 ~~~~lv~lhG~~~~~~~~~~~~~~~~L-~~~~~v~~~d~~G~G~~~~~~----~~~~~~~~~~~~~l~~~~~~~~~~lvG 154 (319)
T 3lcr_A 80 LGPQLILVCPTVMTTGPQVYSRLAEEL-DAGRRVSALVPPGFHGGQALP----ATLTVLVRSLADVVQAEVADGEFALAG 154 (319)
T ss_dssp SSCEEEEECCSSTTCSGGGGHHHHHHH-CTTSEEEEEECTTSSTTCCEE----SSHHHHHHHHHHHHHHHHTTSCEEEEE
T ss_pred CCCeEEEECCCCcCCCHHHHHHHHHHh-CCCceEEEeeCCCCCCCCCCC----CCHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 68899999994 4443334 444445 889999999999999876543 47889999998888776 568999999
Q ss_pred eChhHHHHHHHHHhC---CCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhccccCCC
Q 020064 120 GSWGSTLALAYSLAH---PDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSD 196 (331)
Q Consensus 120 ~S~Gg~~a~~~a~~~---p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (331)
|||||.+++.+|.++ |++++++|++++....... .....+...+ ........
T Consensus 155 hS~Gg~vA~~~A~~~~~~~~~v~~lvl~~~~~~~~~~--------------~~~~~~~~~~----~~~~~~~~------- 209 (319)
T 3lcr_A 155 HSSGGVVAYEVARELEARGLAPRGVVLIDSYSFDGDG--------------GRPEELFRSA----LNERFVEY------- 209 (319)
T ss_dssp ETHHHHHHHHHHHHHHHTTCCCSCEEEESCCCCCSSC--------------CHHHHHHHHH----HHHHHHHH-------
T ss_pred ECHHHHHHHHHHHHHHhcCCCccEEEEECCCCCCccc--------------hhhHHHHHHH----HHHHHhhh-------
Confidence 999999999999988 8899999999986543210 0000000000 00000000
Q ss_pred chHHHHHHHHHhhhHHHhhhcCCCC--hhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEec
Q 020064 197 DKETQYAAARAWTKWEMMTAHLLPN--EENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQG 274 (331)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G 274 (331)
.... ... ...+. .+.. ++... . .+ ....+ ++|+|+|+|
T Consensus 210 ---------------~~~~---~~~~~~~~l~------------~~~~-~~~~~---~-~~----~~~~i-~~PvLli~g 249 (319)
T 3lcr_A 210 ---------------LRLT---GGGNLSQRIT------------AQVW-CLELL---R-GW----RPEGL-TAPTLYVRP 249 (319)
T ss_dssp ---------------HHHH---CCCCHHHHHH------------HHHH-HHHHT---T-TC----CCCCC-SSCEEEEEE
T ss_pred ---------------hccc---CCCchhHHHH------------HHHH-HHHHH---h-cC----CCCCc-CCCEEEEEe
Confidence 0000 000 00000 0000 00000 0 00 12567 699999999
Q ss_pred CCCCccCCcchHHHHHhCCC-CcEEEecCCCCCCCcC-CchhHHHHHHHHHHHhhh
Q 020064 275 RYDVCCPMMSAWDLHKAWPE-ADFKVVADAGHSANEP-GIAAELVATNEKLKNLIK 328 (331)
Q Consensus 275 ~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~-~~~~~~~~~i~~fl~~~~ 328 (331)
++ ..+++.....+.+.+++ .++++++ ++|+.+.+ ..++++.+.|.+||++..
T Consensus 250 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~-g~H~~~~~~~~~~~va~~i~~fL~~~~ 303 (319)
T 3lcr_A 250 AQ-PLVEQEKPEWRGDVLAAMGQVVEAP-GDHFTIIEGEHVASTAHIVGDWLREAH 303 (319)
T ss_dssp SS-CSSSCCCTHHHHHHHHTCSEEEEES-SCTTGGGSTTTHHHHHHHHHHHHHHHH
T ss_pred CC-CCCCcccchhhhhcCCCCceEEEeC-CCcHHhhCcccHHHHHHHHHHHHHhcc
Confidence 88 55666777778877754 6777787 57777665 349999999999998764
|
| >3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-24 Score=180.76 Aligned_cols=238 Identities=11% Similarity=-0.031 Sum_probs=149.2
Q ss_pred CccceeEeCCCceEEEEeC---CCCCCCcEEEeccCCCC-CCCC-CcccccCCCCcEEEEecCCCCCCCCCCCCCCccch
Q 020064 22 YSTGILKVSDIHTIYWEQS---GNPTGHPVVFLHGGPGG-GTTP-SNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTT 96 (331)
Q Consensus 22 ~~~~~~~~~~g~~l~~~~~---g~~~~~~vl~~HG~~~~-~~~~-~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~ 96 (331)
.+...+.. +|.++..... +....|+||++||++++ ..++ .....+.+.||+|+++|+||+|.|.... ...+.
T Consensus 168 ~~~v~i~~-~g~~l~~~~~~P~~~~~~P~vv~~hG~~~~~~~~~~~~~~~l~~~G~~V~~~D~~G~G~s~~~~--~~~~~ 244 (415)
T 3mve_A 168 IKQLEIPF-EKGKITAHLHLTNTDKPHPVVIVSAGLDSLQTDMWRLFRDHLAKHDIAMLTVDMPSVGYSSKYP--LTEDY 244 (415)
T ss_dssp EEEEEEEC-SSSEEEEEEEESCSSSCEEEEEEECCTTSCGGGGHHHHHHTTGGGTCEEEEECCTTSGGGTTSC--CCSCT
T ss_pred eEEEEEEE-CCEEEEEEEEecCCCCCCCEEEEECCCCccHHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCC--CCCCH
Confidence 34455555 4446654333 32345789999997766 3333 3356676899999999999999998654 23446
Q ss_pred HHHHHHHHHHHHHhC---CCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhh
Q 020064 97 WDLIDDIEKLRQHLE---IPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESF 173 (331)
Q Consensus 97 ~~~~~~~~~~~~~~~---~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (331)
+.+..++.+.+.... .++++++|||+||.+++.+|..+|++++++|+++++..........
T Consensus 245 ~~~~~~v~~~l~~~~~vd~~~i~l~G~S~GG~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~---------------- 308 (415)
T 3mve_A 245 SRLHQAVLNELFSIPYVDHHRVGLIGFRFGGNAMVRLSFLEQEKIKACVILGAPIHDIFASPQK---------------- 308 (415)
T ss_dssp THHHHHHHHHGGGCTTEEEEEEEEEEETHHHHHHHHHHHHTTTTCCEEEEESCCCSHHHHCHHH----------------
T ss_pred HHHHHHHHHHHHhCcCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEECCccccccccHHH----------------
Confidence 666777777776654 4689999999999999999999999999999999875321110000
Q ss_pred hccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCC
Q 020064 174 RDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPS 253 (331)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (331)
....+... ...+...+... ..... .+....... ...
T Consensus 309 ~~~~~~~~----~~~~~~~~g~~----------------------~~~~~--------~~~~~~~~~--------~~~-- 344 (415)
T 3mve_A 309 LQQMPKMY----LDVLASRLGKS----------------------VVDIY--------SLSGQMAAW--------SLK-- 344 (415)
T ss_dssp HTTSCHHH----HHHHHHHTTCS----------------------SBCHH--------HHHHHGGGG--------CTT--
T ss_pred HHHhHHHH----HHHHHHHhCCC----------------------ccCHH--------HHHHHHhhc--------Ccc--
Confidence 00000000 00000000000 00000 000000000 000
Q ss_pred cchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhhh
Q 020064 254 DSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNLIK 328 (331)
Q Consensus 254 ~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~ 328 (331)
...... ..++ ++|+|+++|++|.++|++.++.+.+..++++++++++..+. + ..+++.+.+.+||++..
T Consensus 345 ~~~~~~-~~~i-~~PvLii~G~~D~~vp~~~~~~l~~~~~~~~l~~i~g~~~h---~-~~~~~~~~i~~fL~~~L 413 (415)
T 3mve_A 345 VQGFLS-SRKT-KVPILAMSLEGDPVSPYSDNQMVAFFSTYGKAKKISSKTIT---Q-GYEQSLDLAIKWLEDEL 413 (415)
T ss_dssp TTTTTT-SSCB-SSCEEEEEETTCSSSCHHHHHHHHHTBTTCEEEEECCCSHH---H-HHHHHHHHHHHHHHHHH
T ss_pred cccccc-cCCC-CCCEEEEEeCCCCCCCHHHHHHHHHhCCCceEEEecCCCcc---c-chHHHHHHHHHHHHHHh
Confidence 001111 3577 59999999999999999999999998899999999983221 2 37888999999998754
|
| >2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme, hydrolase, HSL, alpha/beta hydrolase fold; 2.3A {Uncultured archaeon} | Back alignment and structure |
|---|
Probab=99.92 E-value=5e-25 Score=177.08 Aligned_cols=242 Identities=17% Similarity=0.047 Sum_probs=143.3
Q ss_pred CCccceeEeCCCceEEEEeCC---CCCCCcEEEeccCC---CCCC-CCCcccccCCC-CcEEEEecCCCCCCCCCCCCCC
Q 020064 21 PYSTGILKVSDIHTIYWEQSG---NPTGHPVVFLHGGP---GGGT-TPSNRRFFDPD-FYRIILFDQRGAGKSTPHACLD 92 (331)
Q Consensus 21 ~~~~~~~~~~~g~~l~~~~~g---~~~~~~vl~~HG~~---~~~~-~~~~~~~~~~~-g~~vi~~D~~G~G~s~~~~~~~ 92 (331)
..+...+...+| ++.+..+. ....|+||++||++ ++.. +..+...+.+. ||.|+++|+||+|.+..+. .
T Consensus 47 ~~~~~~i~~~~g-~i~~~~~~p~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~v~~~d~rg~g~~~~~~--~ 123 (311)
T 2c7b_A 47 ETRDVHIPVSGG-SIRARVYFPKKAAGLPAVLYYHGGGFVFGSIETHDHICRRLSRLSDSVVVSVDYRLAPEYKFPT--A 123 (311)
T ss_dssp EEEEEEEEETTE-EEEEEEEESSSCSSEEEEEEECCSTTTSCCTGGGHHHHHHHHHHHTCEEEEECCCCTTTSCTTH--H
T ss_pred eEEEEEecCCCC-cEEEEEEecCCCCCCcEEEEECCCcccCCChhhhHHHHHHHHHhcCCEEEEecCCCCCCCCCCc--c
Confidence 345566777777 66554332 22347899999976 4433 34445555554 9999999999999986543 1
Q ss_pred ccchHHHHHHHHHHHHHhCC--CcEEEEEeChhHHHHHHHHHhCCC----ceeeEEEeccccchhhhhhhHhhcccccCC
Q 020064 93 QNTTWDLIDDIEKLRQHLEI--PEWQVFGGSWGSTLALAYSLAHPD----KVTGLVLRGIFLLRKKEIDWFYEGGAAAIY 166 (331)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~--~~v~lvG~S~Gg~~a~~~a~~~p~----~v~~li~~~~~~~~~~~~~~~~~~~~~~~~ 166 (331)
..+..+.++.+.+.++.++. ++++++|||+||.+++.++..+|+ +++++|+++|....... .
T Consensus 124 ~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~------------~ 191 (311)
T 2c7b_A 124 VEDAYAALKWVADRADELGVDPDRIAVAGDSAGGNLAAVVSILDRNSGEKLVKKQVLIYPVVNMTGV------------P 191 (311)
T ss_dssp HHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCCSSC------------C
T ss_pred HHHHHHHHHHHHhhHHHhCCCchhEEEEecCccHHHHHHHHHHHHhcCCCCceeEEEECCccCCccc------------c
Confidence 23444555555555666666 689999999999999999988775 59999999986542100 0
Q ss_pred hhhHHhhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhh
Q 020064 167 PDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFL 246 (331)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (331)
......+ ....... ..... ..+.. ... . ........
T Consensus 192 ~~~~~~~-------------~~~~~~~--~~~~~-----~~~~~-~~~---~-~~~~~~~~------------------- 227 (311)
T 2c7b_A 192 TASLVEF-------------GVAETTS--LPIEL-----MVWFG-RQY---L-KRPEEAYD------------------- 227 (311)
T ss_dssp CHHHHHH-------------HHCTTCS--SCHHH-----HHHHH-HHH---C-SSTTGGGS-------------------
T ss_pred ccCCccH-------------HHhccCC--CCHHH-----HHHHH-HHh---C-CCCccccC-------------------
Confidence 0000000 0000000 00000 00000 000 0 00000000
Q ss_pred ccCCCCCcchhhhhccccccccEEEEecCCCCccCCcc--hHHHHHhCCCCcEEEecCCCCCCC-----cCCchhHHHHH
Q 020064 247 NKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMS--AWDLHKAWPEADFKVVADAGHSAN-----EPGIAAELVAT 319 (331)
Q Consensus 247 ~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~--~~~~~~~~~~~~~~~~~~~gH~~~-----~~~~~~~~~~~ 319 (331)
.........+..+ .|+|+++|++|.+++... .+.+.+...+++++++++++|.+. .+ .++++.+.
T Consensus 228 -----~~~~p~~~~l~~~--~P~lii~G~~D~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~-~~~~~~~~ 299 (311)
T 2c7b_A 228 -----FKASPLLADLGGL--PPALVVTAEYDPLRDEGELYAYKMKASGSRAVAVRFAGMVHGFVSFYPFVD-AGREALDL 299 (311)
T ss_dssp -----TTTCGGGSCCTTC--CCEEEEEETTCTTHHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCH-HHHHHHHH
T ss_pred -----cccCcccccccCC--CcceEEEcCCCCchHHHHHHHHHHHHCCCCEEEEEeCCCccccccccccCH-HHHHHHHH
Confidence 0011122244455 399999999999987432 244444456789999999999875 23 37899999
Q ss_pred HHHHHHhhhc
Q 020064 320 NEKLKNLIKN 329 (331)
Q Consensus 320 i~~fl~~~~~ 329 (331)
+.+||++..+
T Consensus 300 i~~fl~~~l~ 309 (311)
T 2c7b_A 300 AAASIRSGLQ 309 (311)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHHHhc
Confidence 9999988654
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.92 E-value=7.7e-24 Score=187.55 Aligned_cols=233 Identities=16% Similarity=0.092 Sum_probs=157.2
Q ss_pred ccceeEeCCCceEEEEeCCCC----------CCCcEEEeccCCCCC---CCCCcccccCCCCcEEEEecCCC---CCCCC
Q 020064 23 STGILKVSDIHTIYWEQSGNP----------TGHPVVFLHGGPGGG---TTPSNRRFFDPDFYRIILFDQRG---AGKST 86 (331)
Q Consensus 23 ~~~~~~~~~g~~l~~~~~g~~----------~~~~vl~~HG~~~~~---~~~~~~~~~~~~g~~vi~~D~~G---~G~s~ 86 (331)
+...+...+|.++++....++ ..|+||++||++++. .+......++++||.|+++|+|| ||.+.
T Consensus 392 ~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~G~~~ 471 (662)
T 3azo_A 392 QIRTFTAPDGREIHAHIYPPHSPDFTGPADELPPYVVMAHGGPTSRVPAVLDLDVAYFTSRGIGVADVNYGGSTGYGRAY 471 (662)
T ss_dssp EEEEEECTTSCEEEEEEECCCCSSEECCTTCCCCEEEEECSSSSSCCCCSCCHHHHHHHTTTCEEEEEECTTCSSSCHHH
T ss_pred eEEEEEcCCCCEEEEEEECCCCccccCCCCCCccEEEEECCCCCccCcccchHHHHHHHhCCCEEEEECCCCCCCccHHH
Confidence 444566667878876654322 346799999986553 34445666778899999999999 77664
Q ss_pred CCC---CCCccchHHHHHHHHHHHHH--hCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcc
Q 020064 87 PHA---CLDQNTTWDLIDDIEKLRQH--LEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGG 161 (331)
Q Consensus 87 ~~~---~~~~~~~~~~~~~~~~~~~~--~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~ 161 (331)
... .....+++++.+.+..+++. ++.++++|+|||+||.+++.++.. |++++++|++++.........
T Consensus 472 ~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~~~~-~~~~~~~v~~~~~~~~~~~~~------ 544 (662)
T 3azo_A 472 RERLRGRWGVVDVEDCAAVATALAEEGTADRARLAVRGGSAGGWTAASSLVS-TDVYACGTVLYPVLDLLGWAD------ 544 (662)
T ss_dssp HHTTTTTTTTHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHH-CCCCSEEEEESCCCCHHHHHT------
T ss_pred HHhhccccccccHHHHHHHHHHHHHcCCcChhhEEEEEECHHHHHHHHHHhC-cCceEEEEecCCccCHHHHhc------
Confidence 211 11235678888888888888 566799999999999999998886 999999999988654221000
Q ss_pred cccCChhhHHhhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhh
Q 020064 162 AAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIE 241 (331)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (331)
.... .....+...+... .....+.+.
T Consensus 545 -------------~~~~-~~~~~~~~~~~~~-------------------------~~~~~~~~~--------------- 570 (662)
T 3azo_A 545 -------------GGTH-DFESRYLDFLIGS-------------------------FEEFPERYR--------------- 570 (662)
T ss_dssp -------------TCSC-GGGTTHHHHHTCC-------------------------TTTCHHHHH---------------
T ss_pred -------------cccc-chhhHhHHHHhCC-------------------------CccchhHHH---------------
Confidence 0000 0000000000000 000000000
Q ss_pred hhhhhccCCCCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCCCC----cEEEecCCCCCCCcCCchhHHH
Q 020064 242 NHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEA----DFKVVADAGHSANEPGIAAELV 317 (331)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~----~~~~~~~~gH~~~~~~~~~~~~ 317 (331)
.......+.++ ++|+|+++|++|..+|++.++++.+.+++. ++++++++||.+.....+.++.
T Consensus 571 ------------~~sp~~~~~~~-~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~ 637 (662)
T 3azo_A 571 ------------DRAPLTRADRV-RVPFLLLQGLEDPVCPPEQCDRFLEAVAGCGVPHAYLSFEGEGHGFRRKETMVRAL 637 (662)
T ss_dssp ------------HTCGGGGGGGC-CSCEEEEEETTCSSSCTHHHHHHHHHHTTSCCCEEEEEETTCCSSCCSHHHHHHHH
T ss_pred ------------hhChHhHhccC-CCCEEEEeeCCCCCCCHHHHHHHHHHHHHcCCCEEEEEECCCCCCCCChHHHHHHH
Confidence 01123456778 599999999999999999999999988654 8999999999875543488999
Q ss_pred HHHHHHHHhhhc
Q 020064 318 ATNEKLKNLIKN 329 (331)
Q Consensus 318 ~~i~~fl~~~~~ 329 (331)
+.+.+|+++..+
T Consensus 638 ~~~~~fl~~~l~ 649 (662)
T 3azo_A 638 EAELSLYAQVFG 649 (662)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHhC
Confidence 999999988654
|
| >3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-24 Score=164.84 Aligned_cols=170 Identities=15% Similarity=0.099 Sum_probs=120.2
Q ss_pred CCCCcEEEeccCCCCCCC-CCcccccCCCCcEEEEec-------------CCCCCCCCCCCCCCccchHHHHHHHHHHH-
Q 020064 43 PTGHPVVFLHGGPGGGTT-PSNRRFFDPDFYRIILFD-------------QRGAGKSTPHACLDQNTTWDLIDDIEKLR- 107 (331)
Q Consensus 43 ~~~~~vl~~HG~~~~~~~-~~~~~~~~~~g~~vi~~D-------------~~G~G~s~~~~~~~~~~~~~~~~~~~~~~- 107 (331)
++.| ||++||++++... ..+...+ ..++.|+++| ++|+|.+..... ......+.++++.+++
T Consensus 15 ~~~p-vv~lHG~g~~~~~~~~~~~~l-~~~~~v~~~~~~~~~~g~~~~~~~~g~g~~~~~~~-~~~~~~~~~~~~~~~~~ 91 (209)
T 3og9_A 15 DLAP-LLLLHSTGGDEHQLVEIAEMI-APSHPILSIRGRINEQGVNRYFKLRGLGGFTKENF-DLESLDEETDWLTDEVS 91 (209)
T ss_dssp TSCC-EEEECCTTCCTTTTHHHHHHH-STTCCEEEECCSBCGGGCCBSSCBCSCTTCSGGGB-CHHHHHHHHHHHHHHHH
T ss_pred CCCC-EEEEeCCCCCHHHHHHHHHhc-CCCceEEEecCCcCCCCcccceecccccccccCCC-CHHHHHHHHHHHHHHHH
Confidence 3556 9999997666544 4444445 4899999999 677776543321 1223444444444444
Q ss_pred ---HHhCC--CcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchh
Q 020064 108 ---QHLEI--PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENER 182 (331)
Q Consensus 108 ---~~~~~--~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (331)
+..+. ++++++||||||.+++.+|.++|++++++|++++......
T Consensus 92 ~~~~~~~~d~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~------------------------------ 141 (209)
T 3og9_A 92 LLAEKHDLDVHKMIAIGYSNGANVALNMFLRGKINFDKIIAFHGMQLEDF------------------------------ 141 (209)
T ss_dssp HHHHHHTCCGGGCEEEEETHHHHHHHHHHHTTSCCCSEEEEESCCCCCCC------------------------------
T ss_pred HHHHhcCCCcceEEEEEECHHHHHHHHHHHhCCcccceEEEECCCCCCcc------------------------------
Confidence 44555 7899999999999999999999999999999987432100
Q ss_pred hhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhcc
Q 020064 183 SCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNID 262 (331)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 262 (331)
.....
T Consensus 142 ---------------------------------------------------------------------------~~~~~ 146 (209)
T 3og9_A 142 ---------------------------------------------------------------------------EQTVQ 146 (209)
T ss_dssp ---------------------------------------------------------------------------CCCCC
T ss_pred ---------------------------------------------------------------------------ccccc
Confidence 00012
Q ss_pred ccccccEEEEecCCCCccCCcchHHHHHhCC----CCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhh
Q 020064 263 NIRHINATIVQGRYDVCCPMMSAWDLHKAWP----EADFKVVADAGHSANEPGIAAELVATNEKLKNLI 327 (331)
Q Consensus 263 ~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 327 (331)
.. ++|+++++|++|.++|++.++.+.+.++ .+++++++ +||.+..+ ..+.+.+||++.
T Consensus 147 ~~-~~p~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~-~gH~~~~~-----~~~~~~~~l~~~ 208 (209)
T 3og9_A 147 LD-DKHVFLSYAPNDMIVPQKNFGDLKGDLEDSGCQLEIYESS-LGHQLTQE-----EVLAAKKWLTET 208 (209)
T ss_dssp CT-TCEEEEEECTTCSSSCHHHHHHHHHHHHHTTCEEEEEECS-STTSCCHH-----HHHHHHHHHHHH
T ss_pred cc-CCCEEEEcCCCCCccCHHHHHHHHHHHHHcCCceEEEEcC-CCCcCCHH-----HHHHHHHHHHhh
Confidence 23 5999999999999999988888887763 35677777 89988433 367788888764
|
| >3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.4e-25 Score=177.97 Aligned_cols=196 Identities=13% Similarity=0.106 Sum_probs=128.3
Q ss_pred CCCcEEEeccCC--CCC--CCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHH---HHHHHHhCC--Cc
Q 020064 44 TGHPVVFLHGGP--GGG--TTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDI---EKLRQHLEI--PE 114 (331)
Q Consensus 44 ~~~~vl~~HG~~--~~~--~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~---~~~~~~~~~--~~ 114 (331)
+.|+||++||++ +.. .+..++..+.+.||.|+++|+||+|.+... .....++..+.+ .+..+.++. ++
T Consensus 49 ~~p~vv~lHGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~~~~~~~---~~~~~~d~~~~~~~l~~~~~~~~~~~~~ 125 (283)
T 3bjr_A 49 NLPAIIIVPGGSYTHIPVAQAESLAMAFAGHGYQAFYLEYTLLTDQQPL---GLAPVLDLGRAVNLLRQHAAEWHIDPQQ 125 (283)
T ss_dssp CEEEEEEECCSTTTCCCHHHHHHHHHHHHTTTCEEEEEECCCTTTCSSC---BTHHHHHHHHHHHHHHHSHHHHTEEEEE
T ss_pred CCcEEEEECCCccccCCccccHHHHHHHHhCCcEEEEEeccCCCccccC---chhHHHHHHHHHHHHHHHHHHhCCCccc
Confidence 457899999954 222 234456667778999999999999987311 112233333333 333333344 48
Q ss_pred EEEEEeChhHHHHHHHHHhCCCc-------------eeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcch
Q 020064 115 WQVFGGSWGSTLALAYSLAHPDK-------------VTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENE 181 (331)
Q Consensus 115 v~lvG~S~Gg~~a~~~a~~~p~~-------------v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (331)
++++||||||.+++.++..+|++ ++++|+++|....... +. ...
T Consensus 126 i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~~~~------------~~-----------~~~ 182 (283)
T 3bjr_A 126 ITPAGFSVGGHIVALYNDYWATRVATELNVTPAMLKPNNVVLGYPVISPLLG------------FP-----------KDD 182 (283)
T ss_dssp EEEEEETHHHHHHHHHHHHTTTHHHHHHTCCHHHHCCSSEEEESCCCCTTSB------------C---------------
T ss_pred EEEEEECHHHHHHHHHHhhccccchhhcCCCcCCCCccEEEEcCCccccccc------------cc-----------ccc
Confidence 99999999999999999999987 8999998875431100 00 000
Q ss_pred hhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhc
Q 020064 182 RSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNI 261 (331)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 261 (331)
. .+ .... . . ....+....+
T Consensus 183 --~---~~-------------------------~~~~-~------~------------------------~~~~~~~~~~ 201 (283)
T 3bjr_A 183 --A---TL-------------------------ATWT-P------T------------------------PNELAADQHV 201 (283)
T ss_dssp ----------------------------------CCC-C------C------------------------GGGGCGGGSC
T ss_pred --c---hH-------------------------HHHH-H------H------------------------hHhcCHHHhc
Confidence 0 00 0000 0 0 0011223345
Q ss_pred cccccccEEEEecCCCCccCCcchHHHHHhCC----CCcEEEecCCCCCCCcCC------------chhHHHHHHHHHHH
Q 020064 262 DNIRHINATIVQGRYDVCCPMMSAWDLHKAWP----EADFKVVADAGHSANEPG------------IAAELVATNEKLKN 325 (331)
Q Consensus 262 ~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~~~------------~~~~~~~~i~~fl~ 325 (331)
.++ ++|+|+++|++|.++|++.++.+.+.++ ++++++++++||.+..+. ..+++.+.+.+||+
T Consensus 202 ~~~-~~P~lii~G~~D~~~p~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~ 280 (283)
T 3bjr_A 202 NSD-NQPTFIWTTADDPIVPATNTLAYATALATAKIPYELHVFKHGPHGLALANAQTAWKPDANQPHVAHWLTLALEWLA 280 (283)
T ss_dssp CTT-CCCEEEEEESCCTTSCTHHHHHHHHHHHHTTCCEEEEEECCCSHHHHHHHHHHSCC-------CCHHHHHHHHHHH
T ss_pred cCC-CCCEEEEEcCCCCCCChHHHHHHHHHHHHCCCCeEEEEeCCCCcccccccccccccccccchhHHHHHHHHHHHHh
Confidence 667 5999999999999999998988888774 358999999999765442 14788999999997
Q ss_pred hh
Q 020064 326 LI 327 (331)
Q Consensus 326 ~~ 327 (331)
+.
T Consensus 281 ~~ 282 (283)
T 3bjr_A 281 DN 282 (283)
T ss_dssp HT
T ss_pred hc
Confidence 53
|
| >2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina} | Back alignment and structure |
|---|
Probab=99.92 E-value=3.1e-24 Score=167.70 Aligned_cols=192 Identities=9% Similarity=-0.014 Sum_probs=134.6
Q ss_pred CccceeEeCCCceEEEEeCC-CC--CCCcEEEeccCCCCCC-CCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchH
Q 020064 22 YSTGILKVSDIHTIYWEQSG-NP--TGHPVVFLHGGPGGGT-TPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTW 97 (331)
Q Consensus 22 ~~~~~~~~~~g~~l~~~~~g-~~--~~~~vl~~HG~~~~~~-~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~ 97 (331)
++....+......++|.... .. ..|+|||+||++++.. +..++..+.++||.|+++|+||. . ...+..
T Consensus 23 ~~v~~~~~~~~~~~~~p~~~~~~g~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~~s---~-----~~~~~~ 94 (258)
T 2fx5_A 23 YTVSSQSEGPSCRIYRPRDLGQGGVRHPVILWGNGTGAGPSTYAGLLSHWASHGFVVAAAETSNA---G-----TGREML 94 (258)
T ss_dssp CCEEEEEETTTEEEEEESSTTGGGCCEEEEEEECCTTCCGGGGHHHHHHHHHHTCEEEEECCSCC---T-----TSHHHH
T ss_pred cceeeeeccCcEEEEeCCCCcccCCCceEEEEECCCCCCchhHHHHHHHHHhCCeEEEEecCCCC---c-----cHHHHH
Confidence 33334444433466666532 11 4578999999776644 44556666678999999999963 1 112333
Q ss_pred HHHHHHHHHHH--------HhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhh
Q 020064 98 DLIDDIEKLRQ--------HLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDA 169 (331)
Q Consensus 98 ~~~~~~~~~~~--------~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (331)
...+.+..... .++.++++++||||||.+++.++ .++++++++++++.....
T Consensus 95 ~~~~~l~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a--~~~~v~~~v~~~~~~~~~------------------ 154 (258)
T 2fx5_A 95 ACLDYLVRENDTPYGTYSGKLNTGRVGTSGHSQGGGGSIMAG--QDTRVRTTAPIQPYTLGL------------------ 154 (258)
T ss_dssp HHHHHHHHHHHSSSSTTTTTEEEEEEEEEEEEHHHHHHHHHT--TSTTCCEEEEEEECCSST------------------
T ss_pred HHHHHHHhcccccccccccccCccceEEEEEChHHHHHHHhc--cCcCeEEEEEecCccccc------------------
Confidence 44444444333 44557899999999999999988 456899999988632100
Q ss_pred HHhhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccC
Q 020064 170 WESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKG 249 (331)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (331)
T Consensus 155 -------------------------------------------------------------------------------- 154 (258)
T 2fx5_A 155 -------------------------------------------------------------------------------- 154 (258)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCcchhhhhccccccccEEEEecCCCCccCCcc-hHHHHHhC-CCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhh
Q 020064 250 FFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMS-AWDLHKAW-PEADFKVVADAGHSANEPGIAAELVATNEKLKNLI 327 (331)
Q Consensus 250 ~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~-~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 327 (331)
. .....+.++ ++|+|+++|++|.++|++. .+.+.+.. +++++++++++||+.+.+. ++++.+.+.+|+++.
T Consensus 155 ----~-~~~~~~~~i-~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~-~~~~~~~i~~fl~~~ 227 (258)
T 2fx5_A 155 ----G-HDSASQRRQ-QGPMFLMSGGGDTIAFPYLNAQPVYRRANVPVFWGERRYVSHFEPVGS-GGAYRGPSTAWFRFQ 227 (258)
T ss_dssp ----T-CCGGGGGCC-SSCEEEEEETTCSSSCHHHHTHHHHHHCSSCEEEEEESSCCTTSSTTT-CGGGHHHHHHHHHHH
T ss_pred ----c-cchhhhccC-CCCEEEEEcCCCcccCchhhHHHHHhccCCCeEEEEECCCCCccccch-HHHHHHHHHHHHHHH
Confidence 0 001235567 5999999999999999876 77777774 3588999999999999886 899999999999854
Q ss_pred h
Q 020064 328 K 328 (331)
Q Consensus 328 ~ 328 (331)
.
T Consensus 228 l 228 (258)
T 2fx5_A 228 L 228 (258)
T ss_dssp H
T ss_pred h
Confidence 3
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.5e-24 Score=193.13 Aligned_cols=226 Identities=15% Similarity=0.169 Sum_probs=152.8
Q ss_pred CCccceeEeCCC-ceEEEEeCCCC------CCCcEEEeccCCCCC----CCC-----CcccccCCCCcEEEEecCCCCCC
Q 020064 21 PYSTGILKVSDI-HTIYWEQSGNP------TGHPVVFLHGGPGGG----TTP-----SNRRFFDPDFYRIILFDQRGAGK 84 (331)
Q Consensus 21 ~~~~~~~~~~~g-~~l~~~~~g~~------~~~~vl~~HG~~~~~----~~~-----~~~~~~~~~g~~vi~~D~~G~G~ 84 (331)
..+...+...+| .++++....++ ..|+||++||++++. .|. .....+.++||.|+++|+||+|.
T Consensus 486 ~~~~~~~~~~~g~~~l~~~~~~P~~~~~~~~~p~vv~~hG~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~ 565 (741)
T 2ecf_A 486 PVEFGTLTAADGKTPLNYSVIKPAGFDPAKRYPVAVYVYGGPASQTVTDSWPGRGDHLFNQYLAQQGYVVFSLDNRGTPR 565 (741)
T ss_dssp CEEEEEEECTTSSCEEEEEEECCSSCCTTSCEEEEEECCCSTTCCSCSSCCCCSHHHHHHHHHHHTTCEEEEECCTTCSS
T ss_pred CcEEEEEEcCCCCEEEEEEEEeCCCCCCCCCcCEEEEEcCCCCcccccccccccchhHHHHHHHhCCCEEEEEecCCCCC
Confidence 345566777788 89988876543 236799999977653 222 24566667899999999999999
Q ss_pred CCCCCC------CCccchHHHHHHHHHHHHH--hCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhh
Q 020064 85 STPHAC------LDQNTTWDLIDDIEKLRQH--LEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDW 156 (331)
Q Consensus 85 s~~~~~------~~~~~~~~~~~~~~~~~~~--~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~ 156 (331)
|..... ......+++.+.+..+.+. ++.++++++||||||.+++.++.++|++++++|++++.......
T Consensus 566 s~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~--- 642 (741)
T 2ecf_A 566 RGRDFGGALYGKQGTVEVADQLRGVAWLKQQPWVDPARIGVQGWSNGGYMTLMLLAKASDSYACGVAGAPVTDWGLY--- 642 (741)
T ss_dssp SCHHHHHTTTTCTTTHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCGGGS---
T ss_pred CChhhhHHHhhhcccccHHHHHHHHHHHHhcCCCChhhEEEEEEChHHHHHHHHHHhCCCceEEEEEcCCCcchhhh---
Confidence 763210 0112244444444444443 23468999999999999999999999999999999986532100
Q ss_pred HhhcccccCChhhHHhhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHH
Q 020064 157 FYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLA 236 (331)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (331)
... +...+.. .. ... ...
T Consensus 643 ----------~~~---------------~~~~~~~---~~-------------------------~~~---------~~~ 660 (741)
T 2ecf_A 643 ----------DSH---------------YTERYMD---LP-------------------------ARN---------DAG 660 (741)
T ss_dssp ----------BHH---------------HHHHHHC---CT-------------------------GGG---------HHH
T ss_pred ----------ccc---------------cchhhcC---Cc-------------------------ccC---------hhh
Confidence 000 0000000 00 000 000
Q ss_pred HhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCC----CCcEEEecCCCCCCCcCCc
Q 020064 237 FARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWP----EADFKVVADAGHSANEPGI 312 (331)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~~~~ 312 (331)
+. ..+....+.++ ++|+|+++|++|..+|++.++.+.+.++ +.++++++++||.+..+.
T Consensus 661 ~~---------------~~~~~~~~~~i-~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~- 723 (741)
T 2ecf_A 661 YR---------------EARVLTHIEGL-RSPLLLIHGMADDNVLFTNSTSLMSALQKRGQPFELMTYPGAKHGLSGAD- 723 (741)
T ss_dssp HH---------------HHCSGGGGGGC-CSCEEEEEETTCSSSCTHHHHHHHHHHHHTTCCCEEEEETTCCSSCCHHH-
T ss_pred hh---------------hcCHHHHHhhC-CCCEEEEccCCCCCCCHHHHHHHHHHHHHCCCceEEEEECCCCCCCCCCc-
Confidence 00 11123356778 5999999999999999999998888774 358999999999998775
Q ss_pred hhHHHHHHHHHHHhhh
Q 020064 313 AAELVATNEKLKNLIK 328 (331)
Q Consensus 313 ~~~~~~~i~~fl~~~~ 328 (331)
++++.+.+.+||++..
T Consensus 724 ~~~~~~~i~~fl~~~l 739 (741)
T 2ecf_A 724 ALHRYRVAEAFLGRCL 739 (741)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhc
Confidence 6899999999998764
|
| >3bxp_A Putative lipase/esterase; putative carboxylesterase, structural genomics, joint center structural genomics, JCSG; HET: EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=3.1e-24 Score=169.59 Aligned_cols=196 Identities=10% Similarity=0.004 Sum_probs=124.5
Q ss_pred CCCcEEEeccCC---CCCC-CCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHH---hC--CCc
Q 020064 44 TGHPVVFLHGGP---GGGT-TPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQH---LE--IPE 114 (331)
Q Consensus 44 ~~~~vl~~HG~~---~~~~-~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~ 114 (331)
+.|+||++||++ ++.. +...+..+.+.||.|+++|+||+|.+.. . .....++..+.+..+.+. ++ .++
T Consensus 34 ~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~~~~-~--~~~~~~d~~~~~~~l~~~~~~~~~~~~~ 110 (277)
T 3bxp_A 34 DYPIMIICPGGGFTYHSGREEAPIATRMMAAGMHTVVLNYQLIVGDQS-V--YPWALQQLGATIDWITTQASAHHVDCQR 110 (277)
T ss_dssp CEEEEEEECCSTTTSCCCTTHHHHHHHHHHTTCEEEEEECCCSTTTCC-C--TTHHHHHHHHHHHHHHHHHHHHTEEEEE
T ss_pred CccEEEEECCCccccCCCccchHHHHHHHHCCCEEEEEecccCCCCCc-c--CchHHHHHHHHHHHHHhhhhhcCCChhh
Confidence 457899999943 3322 2345566667899999999999995443 1 233444444444444433 23 358
Q ss_pred EEEEEeChhHHHHHHHHHhC--------------CCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcc
Q 020064 115 WQVFGGSWGSTLALAYSLAH--------------PDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPEN 180 (331)
Q Consensus 115 v~lvG~S~Gg~~a~~~a~~~--------------p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (331)
++++|||+||.+++.++..+ +.+++++|+++|....... ....
T Consensus 111 i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~~~~-----------------------~~~~ 167 (277)
T 3bxp_A 111 IILAGFSAGGHVVATYNGVATQPELRTRYHLDHYQGQHAAIILGYPVIDLTAG-----------------------FPTT 167 (277)
T ss_dssp EEEEEETHHHHHHHHHHHHTTSHHHHHHTTCTTCCCCCSEEEEESCCCBTTSS-----------------------SSSS
T ss_pred eEEEEeCHHHHHHHHHHhhccCcccccccCcccccCCcCEEEEeCCcccCCCC-----------------------CCCc
Confidence 99999999999999999985 6789999999986532100 0000
Q ss_pred hhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhh
Q 020064 181 ERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDN 260 (331)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (331)
..+...+.. . . . ..+....
T Consensus 168 --~~~~~~~~~-----------------------------~---~--------------------------~-~~~~~~~ 186 (277)
T 3bxp_A 168 --SAARNQITT-----------------------------D---A--------------------------R-LWAAQRL 186 (277)
T ss_dssp --HHHHHHHCS-----------------------------C---G--------------------------G-GSBGGGG
T ss_pred --cccchhccc-----------------------------h---h--------------------------h-hcCHhhc
Confidence 000000000 0 0 0 1122234
Q ss_pred ccccccccEEEEecCCCCccCCcchHHHHHhCC----CCcEEEecCCCCCCCcCC--------------chhHHHHHHHH
Q 020064 261 IDNIRHINATIVQGRYDVCCPMMSAWDLHKAWP----EADFKVVADAGHSANEPG--------------IAAELVATNEK 322 (331)
Q Consensus 261 l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~~~--------------~~~~~~~~i~~ 322 (331)
+.++ .+|+|+++|++|.++|++.++.+.+.++ ++++++++++||.+.... ..+++.+.+.+
T Consensus 187 ~~~~-~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (277)
T 3bxp_A 187 VTPA-SKPAFVWQTATDESVPPINSLKYVQAMLQHQVATAYHLFGSGIHGLALANHVTQKPGKDKYLNDQAAIWPQLALR 265 (277)
T ss_dssp CCTT-SCCEEEEECTTCCCSCTHHHHHHHHHHHHTTCCEEEEECCCC----------------CHHHHHHHHHHHHHHHH
T ss_pred cccC-CCCEEEEeeCCCCccChHHHHHHHHHHHHCCCeEEEEEeCCCCcccccccccccCccccccccchHHHHHHHHHH
Confidence 5566 5899999999999999998888887763 458999999999654332 25788999999
Q ss_pred HHHhh
Q 020064 323 LKNLI 327 (331)
Q Consensus 323 fl~~~ 327 (331)
||++.
T Consensus 266 fl~~~ 270 (277)
T 3bxp_A 266 WLQEQ 270 (277)
T ss_dssp HHHHT
T ss_pred HHHhc
Confidence 99865
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.7e-24 Score=193.11 Aligned_cols=222 Identities=17% Similarity=0.151 Sum_probs=149.4
Q ss_pred ccceeEeCCC-ceEEEEeCCCC------CCCcEEEeccCCCCCC----CCC----cccccCCCCcEEEEecCCCCCCCCC
Q 020064 23 STGILKVSDI-HTIYWEQSGNP------TGHPVVFLHGGPGGGT----TPS----NRRFFDPDFYRIILFDQRGAGKSTP 87 (331)
Q Consensus 23 ~~~~~~~~~g-~~l~~~~~g~~------~~~~vl~~HG~~~~~~----~~~----~~~~~~~~g~~vi~~D~~G~G~s~~ 87 (331)
+...+...+| .++++....++ ..|+||++||++++.. |.. ++..+.++||.|+++|+||+|.+..
T Consensus 456 ~~~~~~~~~g~~~~~~~~~~P~~~~~~~~~p~iv~~HGg~~~~~~~~~~~~~~~~~~~~la~~G~~v~~~d~rG~g~s~~ 535 (706)
T 2z3z_A 456 RTGTIMAADGQTPLYYKLTMPLHFDPAKKYPVIVYVYGGPHAQLVTKTWRSSVGGWDIYMAQKGYAVFTVDSRGSANRGA 535 (706)
T ss_dssp EEEEEECTTSSSEEEEEEECCTTCCTTSCEEEEEECCCCTTCCCCCSCC----CCHHHHHHHTTCEEEEECCTTCSSSCH
T ss_pred EEEEEEcCCCCEEEEEEEEeCCCCCCCCCccEEEEecCCCCceeeccccccCchHHHHHHHhCCcEEEEEecCCCcccch
Confidence 4556677788 78888766542 2367999999776542 222 3556667899999999999998864
Q ss_pred CCC---CCccchHHHHHHHHHHHHHh------CCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHh
Q 020064 88 HAC---LDQNTTWDLIDDIEKLRQHL------EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFY 158 (331)
Q Consensus 88 ~~~---~~~~~~~~~~~~~~~~~~~~------~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~ 158 (331)
... .... -....+|+.++++.+ +.++++++||||||.+++.+|.++|++++++|++++.......
T Consensus 536 ~~~~~~~~~~-~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~----- 609 (706)
T 2z3z_A 536 AFEQVIHRRL-GQTEMADQMCGVDFLKSQSWVDADRIGVHGWSYGGFMTTNLMLTHGDVFKVGVAGGPVIDWNRY----- 609 (706)
T ss_dssp HHHHTTTTCT-THHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCCCCGGGS-----
T ss_pred hHHHHHhhcc-CCccHHHHHHHHHHHHhCCCCCchheEEEEEChHHHHHHHHHHhCCCcEEEEEEcCCccchHHH-----
Confidence 310 0011 112334444444443 3468999999999999999999999999999999886532100
Q ss_pred hcccccCChhhHHhhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHh
Q 020064 159 EGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFA 238 (331)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (331)
... +...+... ....++.+ .
T Consensus 610 --------~~~---------------~~~~~~~~-------------------------~~~~~~~~------------~ 629 (706)
T 2z3z_A 610 --------AIM---------------YGERYFDA-------------------------PQENPEGY------------D 629 (706)
T ss_dssp --------BHH---------------HHHHHHCC-------------------------TTTCHHHH------------H
T ss_pred --------Hhh---------------hhhhhcCC-------------------------cccChhhh------------h
Confidence 000 00000000 00000000 0
Q ss_pred hhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCC----CCcEEEecCCCCCCCcCCchh
Q 020064 239 RIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWP----EADFKVVADAGHSANEPGIAA 314 (331)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~~~~~~ 314 (331)
..+....+.++ ++|+|+++|++|..+|++.++++.+.++ +.+++++|++||.+..+ .++
T Consensus 630 ---------------~~~~~~~~~~i-~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~~~~-~~~ 692 (706)
T 2z3z_A 630 ---------------AANLLKRAGDL-KGRLMLIHGAIDPVVVWQHSLLFLDACVKARTYPDYYVYPSHEHNVMGP-DRV 692 (706)
T ss_dssp ---------------HHCGGGGGGGC-CSEEEEEEETTCSSSCTHHHHHHHHHHHHHTCCCEEEEETTCCSSCCTT-HHH
T ss_pred ---------------hCCHhHhHHhC-CCCEEEEeeCCCCCCCHHHHHHHHHHHHHCCCCeEEEEeCCCCCCCCcc-cHH
Confidence 11223456778 5999999999999999998888888774 46899999999999887 499
Q ss_pred HHHHHHHHHHHhh
Q 020064 315 ELVATNEKLKNLI 327 (331)
Q Consensus 315 ~~~~~i~~fl~~~ 327 (331)
++.+.|.+|+++.
T Consensus 693 ~~~~~i~~fl~~~ 705 (706)
T 2z3z_A 693 HLYETITRYFTDH 705 (706)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 9999999999864
|
| >4h0c_A Phospholipase/carboxylesterase; PSI-biology, midwest center for structural genomics, MCSG, hydrolase; HET: CIT; 1.62A {Dyadobacter fermentans} | Back alignment and structure |
|---|
Probab=99.92 E-value=9.9e-25 Score=163.96 Aligned_cols=176 Identities=14% Similarity=0.080 Sum_probs=121.4
Q ss_pred CCCcEEEeccCCCC-CCCCCcccccCCCCcEEEEecCCCCCCCCCC----CCCCccchHHHHHHHHHHHHH---hC--CC
Q 020064 44 TGHPVVFLHGGPGG-GTTPSNRRFFDPDFYRIILFDQRGAGKSTPH----ACLDQNTTWDLIDDIEKLRQH---LE--IP 113 (331)
Q Consensus 44 ~~~~vl~~HG~~~~-~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~----~~~~~~~~~~~~~~~~~~~~~---~~--~~ 113 (331)
.+++||++||.+++ ..+..++..+...++.|++||.+|++.-+.. .......+++..+.+..+++. .+ .+
T Consensus 21 a~~~Vv~lHG~G~~~~~~~~l~~~l~~~~~~v~~P~~~g~~w~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~~~ 100 (210)
T 4h0c_A 21 AKKAVVMLHGRGGTAADIISLQKVLKLDEMAIYAPQATNNSWYPYSFMAPVQQNQPALDSALALVGEVVAEIEAQGIPAE 100 (210)
T ss_dssp CSEEEEEECCTTCCHHHHHGGGGTSSCTTEEEEEECCGGGCSSSSCTTSCGGGGTTHHHHHHHHHHHHHHHHHHTTCCGG
T ss_pred CCcEEEEEeCCCCCHHHHHHHHHHhCCCCeEEEeecCCCCCccccccCCCcccchHHHHHHHHHHHHHHHHHHHhCCChh
Confidence 34679999996665 3355667777778999999999987642211 111122344444555555443 33 45
Q ss_pred cEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhcccc
Q 020064 114 EWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRL 193 (331)
Q Consensus 114 ~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (331)
+++++|+|+||.+++.++.++|++++++|.+++.......
T Consensus 101 ri~l~G~S~Gg~~a~~~a~~~p~~~~~vv~~sg~l~~~~~---------------------------------------- 140 (210)
T 4h0c_A 101 QIYFAGFSQGACLTLEYTTRNARKYGGIIAFTGGLIGQEL---------------------------------------- 140 (210)
T ss_dssp GEEEEEETHHHHHHHHHHHHTBSCCSEEEEETCCCCSSSC----------------------------------------
T ss_pred hEEEEEcCCCcchHHHHHHhCcccCCEEEEecCCCCChhh----------------------------------------
Confidence 8999999999999999999999999999998874321100
Q ss_pred CCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEe
Q 020064 194 NSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQ 273 (331)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~ 273 (331)
.........+++|++++|
T Consensus 141 --------------------------------------------------------------~~~~~~~~~~~~Pvl~~h 158 (210)
T 4h0c_A 141 --------------------------------------------------------------AIGNYKGDFKQTPVFIST 158 (210)
T ss_dssp --------------------------------------------------------------CGGGCCBCCTTCEEEEEE
T ss_pred --------------------------------------------------------------hhhhhhhhccCCceEEEe
Confidence 000000111158999999
Q ss_pred cCCCCccCCcchHHHHHhC----CCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHh
Q 020064 274 GRYDVCCPMMSAWDLHKAW----PEADFKVVADAGHSANEPGIAAELVATNEKLKNL 326 (331)
Q Consensus 274 G~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 326 (331)
|++|+++|.+.++++.+.+ .+++++++|+.||.+..++ ++.|.+||.+
T Consensus 159 G~~D~~vp~~~~~~~~~~L~~~g~~v~~~~ypg~gH~i~~~e-----l~~i~~wL~k 210 (210)
T 4h0c_A 159 GNPDPHVPVSRVQESVTILEDMNAAVSQVVYPGRPHTISGDE-----IQLVNNTILK 210 (210)
T ss_dssp EESCTTSCHHHHHHHHHHHHHTTCEEEEEEEETCCSSCCHHH-----HHHHHHTTTC
T ss_pred cCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCcCHHH-----HHHHHHHHcC
Confidence 9999999999888777665 3568899999999874332 5678888753
|
| >3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic, dimer, archaea, R267G, hydro; 1.65A {Sulfolobus tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.7e-23 Score=168.44 Aligned_cols=122 Identities=18% Similarity=0.028 Sum_probs=84.9
Q ss_pred CccceeEeCCCceEEEEe---CCCCCCCcEEEeccCC---CCCC-CCCcccccCC-CCcEEEEecCCCCCCCCCCCCCCc
Q 020064 22 YSTGILKVSDIHTIYWEQ---SGNPTGHPVVFLHGGP---GGGT-TPSNRRFFDP-DFYRIILFDQRGAGKSTPHACLDQ 93 (331)
Q Consensus 22 ~~~~~~~~~~g~~l~~~~---~g~~~~~~vl~~HG~~---~~~~-~~~~~~~~~~-~g~~vi~~D~~G~G~s~~~~~~~~ 93 (331)
.+...+...+| .+.++. .+..+.|+||++||++ ++.. +..++..+.+ .||.|+++|+||+|.+..+
T Consensus 65 ~~~~~i~~~~~-~i~~~iy~P~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~La~~~g~~Vv~~Dyrg~~~~~~p----- 138 (323)
T 3ain_A 65 IEDITIPGSET-NIKARVYYPKTQGPYGVLVYYHGGGFVLGDIESYDPLCRAITNSCQCVTISVDYRLAPENKFP----- 138 (323)
T ss_dssp EEEEEEECSSS-EEEEEEEECSSCSCCCEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTSCTT-----
T ss_pred EEEEEecCCCC-eEEEEEEecCCCCCCcEEEEECCCccccCChHHHHHHHHHHHHhcCCEEEEecCCCCCCCCCc-----
Confidence 34455555666 665433 3333568899999954 3333 3344555543 3999999999999987543
Q ss_pred cchHHHHHHHHHHHHHh----CCCcEEEEEeChhHHHHHHHHHhCCCce---eeEEEeccccc
Q 020064 94 NTTWDLIDDIEKLRQHL----EIPEWQVFGGSWGSTLALAYSLAHPDKV---TGLVLRGIFLL 149 (331)
Q Consensus 94 ~~~~~~~~~~~~~~~~~----~~~~v~lvG~S~Gg~~a~~~a~~~p~~v---~~li~~~~~~~ 149 (331)
...++..+.+..+.+.. +.++++|+|||+||.+++.+|.++|+++ +++|+++|...
T Consensus 139 ~~~~d~~~~~~~l~~~~~~lgd~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~vl~~p~~~ 201 (323)
T 3ain_A 139 AAVVDSFDALKWVYNNSEKFNGKYGIAVGGDSAGGNLAAVTAILSKKENIKLKYQVLIYPAVS 201 (323)
T ss_dssp HHHHHHHHHHHHHHHTGGGGTCTTCEEEEEETHHHHHHHHHHHHHHHTTCCCSEEEEESCCCS
T ss_pred chHHHHHHHHHHHHHhHHHhCCCceEEEEecCchHHHHHHHHHHhhhcCCCceeEEEEecccc
Confidence 23455555555555443 5678999999999999999999988766 89999988654
|
| >3b5e_A MLL8374 protein; NP_108484.1, carboxylesterase, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; 1.75A {Mesorhizobium loti} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.91 E-value=4.4e-24 Score=163.17 Aligned_cols=180 Identities=16% Similarity=0.128 Sum_probs=124.7
Q ss_pred eEEEEeCCC--CCCCcEEEeccCCCCCC-CCCcccccCCCCcEEEEecCCCCCC---CCCC---C-CCCccchHHHHHHH
Q 020064 34 TIYWEQSGN--PTGHPVVFLHGGPGGGT-TPSNRRFFDPDFYRIILFDQRGAGK---STPH---A-CLDQNTTWDLIDDI 103 (331)
Q Consensus 34 ~l~~~~~g~--~~~~~vl~~HG~~~~~~-~~~~~~~~~~~g~~vi~~D~~G~G~---s~~~---~-~~~~~~~~~~~~~~ 103 (331)
.++|...++ +++|+||++||++++.. +..+...+. .+|.|+++|.+++.. +... . .....++.+.++++
T Consensus 17 ~l~~~~~~~~~~~~p~vv~lHG~g~~~~~~~~~~~~l~-~~~~vv~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 95 (223)
T 3b5e_A 17 AFPYRLLGAGKESRECLFLLHGSGVDETTLVPLARRIA-PTATLVAARGRIPQEDGFRWFERIDPTRFEQKSILAETAAF 95 (223)
T ss_dssp SSCEEEESTTSSCCCEEEEECCTTBCTTTTHHHHHHHC-TTSEEEEECCSEEETTEEESSCEEETTEECHHHHHHHHHHH
T ss_pred CceEEEeCCCCCCCCEEEEEecCCCCHHHHHHHHHhcC-CCceEEEeCCCCCcCCccccccccCCCcccHHHHHHHHHHH
Confidence 555554432 34688999999776644 444455554 599999999887421 1100 0 00123445556666
Q ss_pred HHHHHHh----C--CCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccC
Q 020064 104 EKLRQHL----E--IPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLI 177 (331)
Q Consensus 104 ~~~~~~~----~--~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (331)
.++++.+ + .++++++|||+||.+++.++.++|++++++|++++.....
T Consensus 96 ~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~-------------------------- 149 (223)
T 3b5e_A 96 AAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMPVLD-------------------------- 149 (223)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCCCCCS--------------------------
T ss_pred HHHHHHHHHHhCCCCCcEEEEEECcHHHHHHHHHHhCccccceEEEecCccCcc--------------------------
Confidence 6666544 4 3689999999999999999999999999999999753210
Q ss_pred CcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchh
Q 020064 178 PENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFL 257 (331)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (331)
. .
T Consensus 150 ------------------~---------------------------------------------------------~--- 151 (223)
T 3b5e_A 150 ------------------H---------------------------------------------------------V--- 151 (223)
T ss_dssp ------------------S---------------------------------------------------------C---
T ss_pred ------------------c---------------------------------------------------------c---
Confidence 0 0
Q ss_pred hhhccccccccEEEEecCCCCccCCcchHHHHHhCC----CCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhh
Q 020064 258 LDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWP----EADFKVVADAGHSANEPGIAAELVATNEKLKNLI 327 (331)
Q Consensus 258 ~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 327 (331)
.....+ ++|+++++|++|.++|.+.++ +.+.++ ++++++++ +||.+..+. .+.+.+|+++.
T Consensus 152 -~~~~~~-~~P~li~~G~~D~~v~~~~~~-~~~~l~~~g~~~~~~~~~-~gH~~~~~~-----~~~i~~~l~~~ 216 (223)
T 3b5e_A 152 -PATDLA-GIRTLIIAGAADETYGPFVPA-LVTLLSRHGAEVDARIIP-SGHDIGDPD-----AAIVRQWLAGP 216 (223)
T ss_dssp -CCCCCT-TCEEEEEEETTCTTTGGGHHH-HHHHHHHTTCEEEEEEES-CCSCCCHHH-----HHHHHHHHHCC
T ss_pred -cccccc-CCCEEEEeCCCCCcCCHHHHH-HHHHHHHCCCceEEEEec-CCCCcCHHH-----HHHHHHHHHhh
Confidence 001123 599999999999999999888 887775 57899999 999986443 45777787654
|
| >1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE; 2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.91 E-value=1.7e-24 Score=173.68 Aligned_cols=125 Identities=20% Similarity=0.125 Sum_probs=91.0
Q ss_pred CccceeEeCCCceEEEEeC-CCCCCCcEEEeccCC---CCCC-CCCcccccC-CCCcEEEEecCCCCCCCCCCCCCCccc
Q 020064 22 YSTGILKVSDIHTIYWEQS-GNPTGHPVVFLHGGP---GGGT-TPSNRRFFD-PDFYRIILFDQRGAGKSTPHACLDQNT 95 (331)
Q Consensus 22 ~~~~~~~~~~g~~l~~~~~-g~~~~~~vl~~HG~~---~~~~-~~~~~~~~~-~~g~~vi~~D~~G~G~s~~~~~~~~~~ 95 (331)
.++..+...+| .+.++.+ +..+.|+||++||++ ++.. +..+...+. ..||.|+++|+||+|.+..+. ...+
T Consensus 56 ~~~~~i~~~~g-~i~~~~y~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~Vv~~dyrg~g~~~~p~--~~~d 132 (311)
T 1jji_A 56 VEDRTIKGRNG-DIRVRVYQQKPDSPVLVYYHGGGFVICSIESHDALCRRIARLSNSTVVSVDYRLAPEHKFPA--AVYD 132 (311)
T ss_dssp EEEEEEEETTE-EEEEEEEESSSSEEEEEEECCSTTTSCCTGGGHHHHHHHHHHHTSEEEEEECCCTTTSCTTH--HHHH
T ss_pred EEEEEecCCCC-cEEEEEEcCCCCceEEEEECCcccccCChhHhHHHHHHHHHHhCCEEEEecCCCCCCCCCCC--cHHH
Confidence 55666777777 5544333 223457899999976 4433 344555555 479999999999999987543 2234
Q ss_pred hHHHHHHHHHHHHHhCCC--cEEEEEeChhHHHHHHHHHhCCCc----eeeEEEeccccc
Q 020064 96 TWDLIDDIEKLRQHLEIP--EWQVFGGSWGSTLALAYSLAHPDK----VTGLVLRGIFLL 149 (331)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~--~v~lvG~S~Gg~~a~~~a~~~p~~----v~~li~~~~~~~ 149 (331)
..+.++++.+.++.++.+ +++|+|||+||.+++.++..+|++ ++++|+++|...
T Consensus 133 ~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~ 192 (311)
T 1jji_A 133 CYDATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQILIYPVVN 192 (311)
T ss_dssp HHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCCC
T ss_pred HHHHHHHHHhhHHHhCCCchhEEEEEeCHHHHHHHHHHHHHHhcCCCCceEEEEeCCccC
Confidence 555666666666667765 899999999999999999988765 999999998764
|
| >4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A | Back alignment and structure |
|---|
Probab=99.91 E-value=2.3e-23 Score=162.38 Aligned_cols=200 Identities=14% Similarity=0.059 Sum_probs=123.1
Q ss_pred CccceeEe-CCCceEEEEe---CCCCCCCcEEEeccCCCCCC---CCCcccccCCCCcEEEEecCCCCCCCCCCCCCCc-
Q 020064 22 YSTGILKV-SDIHTIYWEQ---SGNPTGHPVVFLHGGPGGGT---TPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQ- 93 (331)
Q Consensus 22 ~~~~~~~~-~~g~~l~~~~---~g~~~~~~vl~~HG~~~~~~---~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~- 93 (331)
.+++.+.+ .||.+|...- .+.+..|.||++||++++.. +...+..+.++||.|+++|+||||.|........
T Consensus 29 ~~e~~~~~~~dG~~i~g~l~~P~~~~~~p~Vl~~HG~g~~~~~~~~~~~a~~la~~Gy~Vl~~D~rG~G~s~~~~~~~~~ 108 (259)
T 4ao6_A 29 VQERGFSLEVDGRTVPGVYWSPAEGSSDRLVLLGHGGTTHKKVEYIEQVAKLLVGRGISAMAIDGPGHGERASVQAGREP 108 (259)
T ss_dssp EEEEEEEEEETTEEEEEEEEEESSSCCSEEEEEEC--------CHHHHHHHHHHHTTEEEEEECCCC-------------
T ss_pred ceEEEEEEeeCCeEEEEEEEeCCCCCCCCEEEEeCCCcccccchHHHHHHHHHHHCCCeEEeeccCCCCCCCCccccccc
Confidence 34444444 5888886443 34334567899999876533 2345677888999999999999998864331100
Q ss_pred ----------------cchHHHHHHHHHHH----HHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhh
Q 020064 94 ----------------NTTWDLIDDIEKLR----QHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKE 153 (331)
Q Consensus 94 ----------------~~~~~~~~~~~~~~----~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~ 153 (331)
........|....+ ...+.+++.++|+|+||.+++.++...| ++++.|+..+......
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~d~~a~l~~l~~~~d~~rv~~~G~S~GG~~a~~~a~~~p-ri~Aav~~~~~~~~~~- 186 (259)
T 4ao6_A 109 TDVVGLDAFPRMWHEGGGTAAVIADWAAALDFIEAEEGPRPTGWWGLSMGTMMGLPVTASDK-RIKVALLGLMGVEGVN- 186 (259)
T ss_dssp CCGGGSTTHHHHHHHTTHHHHHHHHHHHHHHHHHHHHCCCCEEEEECTHHHHHHHHHHHHCT-TEEEEEEESCCTTSTT-
T ss_pred chhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHhhhccCCceEEEEeechhHHHHHHHHhcCC-ceEEEEEecccccccc-
Confidence 01112233333333 3446789999999999999999999988 4666665433211000
Q ss_pred hhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHH
Q 020064 154 IDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIF 233 (331)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (331)
T Consensus 187 -------------------------------------------------------------------------------- 186 (259)
T 4ao6_A 187 -------------------------------------------------------------------------------- 186 (259)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCC--CCcEEEecCCCCCCCcCC
Q 020064 234 SLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWP--EADFKVVADAGHSANEPG 311 (331)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~ 311 (331)
..+..+.+.+| ++|+|+++|++|.++|++.++.+.+.+. +.+++++++ +|... .
T Consensus 187 --------------------~~~~~~~a~~i-~~P~Li~hG~~D~~vp~~~~~~l~~al~~~~k~l~~~~G-~H~~~--p 242 (259)
T 4ao6_A 187 --------------------GEDLVRLAPQV-TCPVRYLLQWDDELVSLQSGLELFGKLGTKQKTLHVNPG-KHSAV--P 242 (259)
T ss_dssp --------------------HHHHHHHGGGC-CSCEEEEEETTCSSSCHHHHHHHHHHCCCSSEEEEEESS-CTTCC--C
T ss_pred --------------------ccchhhhhccC-CCCEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEeCC-CCCCc--C
Confidence 11122345667 5999999999999999999999999984 456888885 66432 1
Q ss_pred chhHHHHHHHHHHHhhh
Q 020064 312 IAAELVATNEKLKNLIK 328 (331)
Q Consensus 312 ~~~~~~~~i~~fl~~~~ 328 (331)
..+..+.+.+||++-.
T Consensus 243 -~~e~~~~~~~fl~~hL 258 (259)
T 4ao6_A 243 -TWEMFAGTVDYLDQRL 258 (259)
T ss_dssp -HHHHTHHHHHHHHHHC
T ss_pred -HHHHHHHHHHHHHHhc
Confidence 4556778888988743
|
| >2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia eriantha} PDB: 2o7v_A | Back alignment and structure |
|---|
Probab=99.90 E-value=1.7e-24 Score=175.95 Aligned_cols=221 Identities=15% Similarity=0.039 Sum_probs=126.9
Q ss_pred CCCcEEEeccCCCC---CC---CCCcccccC-CCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHH-------
Q 020064 44 TGHPVVFLHGGPGG---GT---TPSNRRFFD-PDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQH------- 109 (331)
Q Consensus 44 ~~~~vl~~HG~~~~---~~---~~~~~~~~~-~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~------- 109 (331)
..|+||++||++.. .. +...+..+. +.||.|+++|+||++.+..+ ..+++..+.+..+.+.
T Consensus 82 ~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vv~~d~rg~~~~~~~-----~~~~d~~~~~~~l~~~~~~~~~~ 156 (338)
T 2o7r_A 82 KLPLVVYFHGGGFILFSAASTIFHDFCCEMAVHAGVVIASVDYRLAPEHRLP-----AAYDDAMEALQWIKDSRDEWLTN 156 (338)
T ss_dssp CEEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTCEEEEEECCCTTTTCTT-----HHHHHHHHHHHHHHTCCCHHHHH
T ss_pred CceEEEEEcCCcCcCCCCCchhHHHHHHHHHHHCCcEEEEecCCCCCCCCCc-----hHHHHHHHHHHHHHhCCcchhhc
Confidence 45789999996532 22 233455565 57999999999998765422 2344555555554432
Q ss_pred -hCCCcEEEEEeChhHHHHHHHHHhCCC--------ceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcc
Q 020064 110 -LEIPEWQVFGGSWGSTLALAYSLAHPD--------KVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPEN 180 (331)
Q Consensus 110 -~~~~~v~lvG~S~Gg~~a~~~a~~~p~--------~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (331)
++.++++|+|||+||.+++.+|.++|+ +++++|+++|........... ...
T Consensus 157 ~~d~~~v~l~G~S~GG~ia~~~a~~~~~~~~~~~~~~v~~~vl~~p~~~~~~~~~~~------------~~~-------- 216 (338)
T 2o7r_A 157 FADFSNCFIMGESAGGNIAYHAGLRAAAVADELLPLKIKGLVLDEPGFGGSKRTGSE------------LRL-------- 216 (338)
T ss_dssp HEEEEEEEEEEETHHHHHHHHHHHHHHTTHHHHTTCCEEEEEEESCCCCCSSCCHHH------------HHT--------
T ss_pred cCCcceEEEEEeCccHHHHHHHHHHhccccccCCCCceeEEEEECCccCCCcCChhh------------hcc--------
Confidence 344789999999999999999999988 899999999865422110000 000
Q ss_pred hhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcc--hhh
Q 020064 181 ERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDS--FLL 258 (331)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 258 (331)
...... ... .....|... .............. ... .. ...
T Consensus 217 ---------~~~~~~-~~~---~~~~~~~~~--~~~~~~~~~~~~~~----------------------~~~-~~~~~~~ 258 (338)
T 2o7r_A 217 ---------ANDSRL-PTF---VLDLIWELS--LPMGADRDHEYCNP----------------------TAE-SEPLYSF 258 (338)
T ss_dssp ---------TTCSSS-CHH---HHHHHHHHH--SCTTCCTTSTTTCC----------------------C-----CCTHH
T ss_pred ---------CCCccc-CHH---HHHHHHHHh--CCCCCCCCCcccCC----------------------CCC-CcccccH
Confidence 000000 000 000000000 00000000000000 000 00 012
Q ss_pred hhccccccccEEEEecCCCCccCCc--chHHHHHhCCCCcEEEecCCCCCCCcCC--chhHHHHHHHHHHHhhh
Q 020064 259 DNIDNIRHINATIVQGRYDVCCPMM--SAWDLHKAWPEADFKVVADAGHSANEPG--IAAELVATNEKLKNLIK 328 (331)
Q Consensus 259 ~~l~~i~~~P~l~i~G~~D~~~~~~--~~~~~~~~~~~~~~~~~~~~gH~~~~~~--~~~~~~~~i~~fl~~~~ 328 (331)
+.+.++ .+|+|+++|++|.+++.. ..+.+.+..+++++++++++||.++..+ ..+++.+.|.+|+++..
T Consensus 259 ~~l~~~-~~P~Lvi~G~~D~~~~~~~~~~~~l~~~~~~~~~~~~~g~gH~~~~~~~~~~~~~~~~i~~Fl~~~~ 331 (338)
T 2o7r_A 259 DKIRSL-GWRVMVVGCHGDPMIDRQMELAERLEKKGVDVVAQFDVGGYHAVKLEDPEKAKQFFVILKKFVVDSC 331 (338)
T ss_dssp HHHHHH-TCEEEEEEETTSTTHHHHHHHHHHHHHTTCEEEEEEESSCCTTGGGTCHHHHHHHHHHHHHHHC---
T ss_pred hhhcCC-CCCEEEEECCCCcchHHHHHHHHHHHHCCCcEEEEEECCCceEEeccChHHHHHHHHHHHHHHHhhc
Confidence 345556 479999999999998732 2344444446789999999999887654 13889999999997653
|
| >2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor, gibberellin, gibberellin signaling pathway, hydrolase, nucleus, receptor, developmental protein; HET: GA3; 1.80A {Arabidopsis thaliana} PDB: 2zsi_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=5.2e-24 Score=173.88 Aligned_cols=213 Identities=11% Similarity=0.033 Sum_probs=128.8
Q ss_pred CCCcEEEeccCCC---CCC---CCCcccccC-CCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHH------h
Q 020064 44 TGHPVVFLHGGPG---GGT---TPSNRRFFD-PDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQH------L 110 (331)
Q Consensus 44 ~~~~vl~~HG~~~---~~~---~~~~~~~~~-~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~------~ 110 (331)
..|+||++||++. +.. +..++..+. +.||.|+++|+||.+.+.. ...+++..+.+..+.+. +
T Consensus 112 ~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~g~~vv~~d~rg~~~~~~-----~~~~~D~~~~~~~l~~~~~~~~~~ 186 (351)
T 2zsh_A 112 IVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNYRRAPENPY-----PCAYDDGWIALNWVNSRSWLKSKK 186 (351)
T ss_dssp SCEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTSEEEEECCCCTTTSCT-----THHHHHHHHHHHHHHTCGGGCCTT
T ss_pred CceEEEEECCCcCcCCCCcchhHHHHHHHHHHHcCCEEEEecCCCCCCCCC-----chhHHHHHHHHHHHHhCchhhcCC
Confidence 3468999999553 222 233455565 5799999999999876542 23456666666666553 3
Q ss_pred CCC-cEEEEEeChhHHHHHHHHHhCCC---ceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhH
Q 020064 111 EIP-EWQVFGGSWGSTLALAYSLAHPD---KVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFV 186 (331)
Q Consensus 111 ~~~-~v~lvG~S~Gg~~a~~~a~~~p~---~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (331)
+.+ +++|+|||+||.+++.+|.++|+ +++++|+++|........ ......
T Consensus 187 d~~~~i~l~G~S~GG~la~~~a~~~~~~~~~v~~~vl~~p~~~~~~~~------------~~~~~~-------------- 240 (351)
T 2zsh_A 187 DSKVHIFLAGDSSGGNIAHNVALRAGESGIDVLGNILLNPMFGGNERT------------ESEKSL-------------- 240 (351)
T ss_dssp TSSCEEEEEEETHHHHHHHHHHHHHHTTTCCCCEEEEESCCCCCSSCC------------HHHHHH--------------
T ss_pred CCCCcEEEEEeCcCHHHHHHHHHHhhccCCCeeEEEEECCccCCCcCC------------hhhhhc--------------
Confidence 567 99999999999999999999988 899999999865321100 000000
Q ss_pred HhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhcccccc
Q 020064 187 DAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRH 266 (331)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 266 (331)
..... .... .....|.. ..... .... . ............+.++ +
T Consensus 241 ---~~~~~-~~~~---~~~~~~~~---~~~~~-~~~~-----~-------------------~~~~~~~~~~~~l~~i-~ 284 (351)
T 2zsh_A 241 ---DGKYF-VTVR---DRDWYWKA---FLPEG-EDRE-----H-------------------PACNPFSPRGKSLEGV-S 284 (351)
T ss_dssp ---TTTSS-CCHH---HHHHHHHH---HSCTT-CCTT-----S-------------------TTTCTTSTTSCCCTTC-C
T ss_pred ---CCCcc-cCHH---HHHHHHHH---hCCCC-CCCC-----C-------------------cccCCCCCCccchhhC-C
Confidence 00000 0000 00000000 00000 0000 0 0000000112345666 4
Q ss_pred c-cEEEEecCCCCccCCcchHHHHHhC----CCCcEEEecCCCCCCCc----CCchhHHHHHHHHHHHh
Q 020064 267 I-NATIVQGRYDVCCPMMSAWDLHKAW----PEADFKVVADAGHSANE----PGIAAELVATNEKLKNL 326 (331)
Q Consensus 267 ~-P~l~i~G~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~----~~~~~~~~~~i~~fl~~ 326 (331)
+ |+|+++|++|.+++ ....+.+.+ .++++++++++||.++. +. ++++.+.|.+||++
T Consensus 285 ~pP~Lii~G~~D~~~~--~~~~~~~~l~~~g~~~~~~~~~g~gH~~~~~~~~~~-~~~~~~~i~~Fl~~ 350 (351)
T 2zsh_A 285 FPKSLVVVAGLDLIRD--WQLAYAEGLKKAGQEVKLMHLEKATVGFYLLPNNNH-FHNVMDEISAFVNA 350 (351)
T ss_dssp CCEEEEEEETTSTTHH--HHHHHHHHHHHTTCCEEEEEETTCCTTTTSSSCSHH-HHHHHHHHHHHHHC
T ss_pred CCCEEEEEcCCCcchH--HHHHHHHHHHHcCCCEEEEEECCCcEEEEecCCCHH-HHHHHHHHHHHhcC
Confidence 6 99999999999987 333344433 47899999999998876 54 89999999999974
|
| >3u0v_A Lysophospholipase-like protein 1; alpha, beta hydrolase fold, hydrolase; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.6e-23 Score=161.87 Aligned_cols=178 Identities=13% Similarity=0.082 Sum_probs=124.3
Q ss_pred CCCCcEEEeccCCCCCC-CCCccccc-----CCCCcEEEEecCCCCCCCC----------------CCCCCCccchHHHH
Q 020064 43 PTGHPVVFLHGGPGGGT-TPSNRRFF-----DPDFYRIILFDQRGAGKST----------------PHACLDQNTTWDLI 100 (331)
Q Consensus 43 ~~~~~vl~~HG~~~~~~-~~~~~~~~-----~~~g~~vi~~D~~G~G~s~----------------~~~~~~~~~~~~~~ 100 (331)
+..|+||++||++++.. +..+...+ ...+++|+++|.|+++.+. ........++++.+
T Consensus 21 ~~~p~vv~lHG~g~~~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~ 100 (239)
T 3u0v_A 21 RHSASLIFLHGSGDSGQGLRMWIKQVLNQDLTFQHIKIIYPTAPPRSYTPMKGGISNVWFDRFKITNDCPEHLESIDVMC 100 (239)
T ss_dssp CCCEEEEEECCTTCCHHHHHHHHHHHHTSCCCCSSEEEEEECCCEEECGGGTTCEEECSSCCSSSSSSSCCCHHHHHHHH
T ss_pred CCCcEEEEEecCCCchhhHHHHHHHHhhcccCCCceEEEeCCCCccccccCCCCccccceeccCCCcccccchhhHHHHH
Confidence 35688999999776643 33333333 3358999999887532110 00011235778888
Q ss_pred HHHHHHHHH-----hCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhc
Q 020064 101 DDIEKLRQH-----LEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRD 175 (331)
Q Consensus 101 ~~~~~~~~~-----~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (331)
+++..+++. ++.++++|+||||||.+++.++.++|++++++|++++........
T Consensus 101 ~~l~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~--------------------- 159 (239)
T 3u0v_A 101 QVLTDLIDEEVKSGIKKNRILIGGFSMGGCMAMHLAYRNHQDVAGVFALSSFLNKASAV--------------------- 159 (239)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHHCTTSSEEEEESCCCCTTCHH---------------------
T ss_pred HHHHHHHHHHHHhCCCcccEEEEEEChhhHHHHHHHHhCccccceEEEecCCCCchhHH---------------------
Confidence 899888877 356799999999999999999999999999999999865321000
Q ss_pred cCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcc
Q 020064 176 LIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDS 255 (331)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (331)
..
T Consensus 160 ----------~~-------------------------------------------------------------------- 161 (239)
T 3u0v_A 160 ----------YQ-------------------------------------------------------------------- 161 (239)
T ss_dssp ----------HH--------------------------------------------------------------------
T ss_pred ----------HH--------------------------------------------------------------------
Confidence 00
Q ss_pred hhhhhcccccccc-EEEEecCCCCccCCcchHHHHHhCC----CCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhh
Q 020064 256 FLLDNIDNIRHIN-ATIVQGRYDVCCPMMSAWDLHKAWP----EADFKVVADAGHSANEPGIAAELVATNEKLKNLI 327 (331)
Q Consensus 256 ~~~~~l~~i~~~P-~l~i~G~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 327 (331)
.. ..... ++| +|+++|++|.++|.+.++.+.+.++ ++++++++++||.+..+ ..+.+.+|+++.
T Consensus 162 -~~-~~~~~-~~pp~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~-----~~~~~~~~l~~~ 230 (239)
T 3u0v_A 162 -AL-QKSNG-VLPELFQCHGTADELVLHSWAEETNSMLKSLGVTTKFHSFPNVYHELSKT-----ELDILKLWILTK 230 (239)
T ss_dssp -HH-HHCCS-CCCCEEEEEETTCSSSCHHHHHHHHHHHHHTTCCEEEEEETTCCSSCCHH-----HHHHHHHHHHHH
T ss_pred -HH-Hhhcc-CCCCEEEEeeCCCCccCHHHHHHHHHHHHHcCCcEEEEEeCCCCCcCCHH-----HHHHHHHHHHHh
Confidence 00 01122 477 9999999999999988888777763 67899999999998743 355666666554
|
| >3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured bacterium} PDB: 3dnm_A | Back alignment and structure |
|---|
Probab=99.90 E-value=2.6e-23 Score=167.55 Aligned_cols=122 Identities=18% Similarity=0.157 Sum_probs=89.2
Q ss_pred CccceeEeCCCceEEEEeCCCCCCCc-EEEeccCC---CCC-CCCCcccccCC-CCcEEEEecCCCCCCCCCCCCCCccc
Q 020064 22 YSTGILKVSDIHTIYWEQSGNPTGHP-VVFLHGGP---GGG-TTPSNRRFFDP-DFYRIILFDQRGAGKSTPHACLDQNT 95 (331)
Q Consensus 22 ~~~~~~~~~~g~~l~~~~~g~~~~~~-vl~~HG~~---~~~-~~~~~~~~~~~-~g~~vi~~D~~G~G~s~~~~~~~~~~ 95 (331)
.+...+.. +|..+ |...+....++ ||++||++ ++. .+...+..+++ .||.|+++|+|+++.+.. ...
T Consensus 58 ~~~~~~~~-~g~~~-~~p~~~~~~~~~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~~-----~~~ 130 (322)
T 3k6k_A 58 VELTLTDL-GGVPC-IRQATDGAGAAHILYFHGGGYISGSPSTHLVLTTQLAKQSSATLWSLDYRLAPENPF-----PAA 130 (322)
T ss_dssp CEEEEEEE-TTEEE-EEEECTTCCSCEEEEECCSTTTSCCHHHHHHHHHHHHHHHTCEEEEECCCCTTTSCT-----THH
T ss_pred ceEEEEEE-CCEeE-EecCCCCCCCeEEEEEcCCcccCCChHHHHHHHHHHHHhcCCEEEEeeCCCCCCCCC-----chH
Confidence 33444555 55577 66666555677 99999965 232 23344455554 499999999999887643 235
Q ss_pred hHHHHHHHHHHHHH-hCCCcEEEEEeChhHHHHHHHHHhCCCc----eeeEEEeccccch
Q 020064 96 TWDLIDDIEKLRQH-LEIPEWQVFGGSWGSTLALAYSLAHPDK----VTGLVLRGIFLLR 150 (331)
Q Consensus 96 ~~~~~~~~~~~~~~-~~~~~v~lvG~S~Gg~~a~~~a~~~p~~----v~~li~~~~~~~~ 150 (331)
+++..+.+..+++. ++.++++|+|||+||.+++.+|..++++ ++++|+++|....
T Consensus 131 ~~d~~~a~~~l~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~ 190 (322)
T 3k6k_A 131 VDDCVAAYRALLKTAGSADRIIIAGDSAGGGLTTASMLKAKEDGLPMPAGLVMLSPFVDL 190 (322)
T ss_dssp HHHHHHHHHHHHHHHSSGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCT
T ss_pred HHHHHHHHHHHHHcCCCCccEEEEecCccHHHHHHHHHHHHhcCCCCceEEEEecCCcCc
Confidence 67777777777776 6667999999999999999999988765 9999999987643
|
| >1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A, alpha/beta hydrolase family; 1.85A {Bacillus subtilis} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.90 E-value=8.4e-24 Score=173.04 Aligned_cols=125 Identities=20% Similarity=0.142 Sum_probs=85.2
Q ss_pred cceeEeCCCceEEEE---eCCCC-CCCcEEEeccCC---CCCC---CCCcccccCCCCcEEEEecCCCCCCCCCCCCCCc
Q 020064 24 TGILKVSDIHTIYWE---QSGNP-TGHPVVFLHGGP---GGGT---TPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQ 93 (331)
Q Consensus 24 ~~~~~~~~g~~l~~~---~~g~~-~~~~vl~~HG~~---~~~~---~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~ 93 (331)
...+...+|..+++. ..+.. ..|+||++||++ ++.. +......+.+.||.|+++|+||+|.|..... ..
T Consensus 84 ~~~~~~~~g~~l~~~v~~p~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~la~~g~~vv~~d~r~~gg~~~~~~-~~ 162 (361)
T 1jkm_A 84 TETILGVDGNEITLHVFRPAGVEGVLPGLVYTHGGGMTILTTDNRVHRRWCTDLAAAGSVVVMVDFRNAWTAEGHHP-FP 162 (361)
T ss_dssp EEEEECTTSCEEEEEEEEETTCCSCEEEEEEECCSTTTSSCSSSHHHHHHHHHHHHTTCEEEEEECCCSEETTEECC-TT
T ss_pred eeeeecCCCCeEEEEEEeCCCCCCCCeEEEEEcCCccccCCCcccchhHHHHHHHhCCCEEEEEecCCCCCCCCCCC-CC
Confidence 445566677455443 32322 347899999975 4433 2334555656899999999999975542211 22
Q ss_pred cchHHH---HHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHh-----CCCceeeEEEeccccc
Q 020064 94 NTTWDL---IDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLA-----HPDKVTGLVLRGIFLL 149 (331)
Q Consensus 94 ~~~~~~---~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~-----~p~~v~~li~~~~~~~ 149 (331)
...+++ ++.+.+.++.++.++++|+|||+||.+++.++.. +|++++++|++++...
T Consensus 163 ~~~~D~~~~~~~v~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~p~~i~~~il~~~~~~ 226 (361)
T 1jkm_A 163 SGVEDCLAAVLWVDEHRESLGLSGVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPYIS 226 (361)
T ss_dssp HHHHHHHHHHHHHHHTHHHHTEEEEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEEEEESCCCC
T ss_pred ccHHHHHHHHHHHHhhHHhcCCCeEEEEEECHHHHHHHHHHHHHHhcCCCcCcceEEEECCccc
Confidence 234444 3344444455677799999999999999999998 8889999999998664
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.90 E-value=1.3e-23 Score=187.98 Aligned_cols=225 Identities=12% Similarity=0.111 Sum_probs=147.8
Q ss_pred CccceeEeCCCceEEEEeCCCC------CCCcEEEeccCCCCCC---CCC---cccccCCCCcEEEEecCCCCCCCCC--
Q 020064 22 YSTGILKVSDIHTIYWEQSGNP------TGHPVVFLHGGPGGGT---TPS---NRRFFDPDFYRIILFDQRGAGKSTP-- 87 (331)
Q Consensus 22 ~~~~~~~~~~g~~l~~~~~g~~------~~~~vl~~HG~~~~~~---~~~---~~~~~~~~g~~vi~~D~~G~G~s~~-- 87 (331)
.+...+...+| ++.+....++ ..|+||++||++++.. .+. ....+.++||.|+++|+||+|.+..
T Consensus 468 ~~~~~~~~~~g-~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~G~~vv~~d~rG~g~~g~~~ 546 (723)
T 1xfd_A 468 VEYRDIEIDDY-NLPMQILKPATFTDTTHYPLLLVVDGTPGSQSVAEKFEVSWETVMVSSHGAVVVKCDGRGSGFQGTKL 546 (723)
T ss_dssp CCBCCEEETTE-EECCBEEBCSSCCSSSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEECCCCTTCSSSHHHH
T ss_pred ceEEEEEcCCc-eEEEEEEeCCCCCCCCccCEEEEEcCCCCccccCccccccHHHHHhhcCCEEEEEECCCCCccccHHH
Confidence 45566777888 8776554332 2367999999776521 222 2233445899999999999998521
Q ss_pred ----CCCCCccchHHHHHHHHHHHHH--hCCCcEEEEEeChhHHHHHHHHHhC----CCceeeEEEeccccchhhhhhhH
Q 020064 88 ----HACLDQNTTWDLIDDIEKLRQH--LEIPEWQVFGGSWGSTLALAYSLAH----PDKVTGLVLRGIFLLRKKEIDWF 157 (331)
Q Consensus 88 ----~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~lvG~S~Gg~~a~~~a~~~----p~~v~~li~~~~~~~~~~~~~~~ 157 (331)
.........+++.+.+..+.+. ++.++++|+||||||.+++.++.++ |++++++|++++......
T Consensus 547 ~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~v~~~~~~~~~~----- 621 (723)
T 1xfd_A 547 LHEVRRRLGLLEEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCGSALSPITDFKL----- 621 (723)
T ss_dssp HHTTTTCTTTHHHHHHHHHHHHHHSSSSEEEEEEEEEEETHHHHHHHHCCCCSSSTTCCCCSEEEEESCCCCTTS-----
T ss_pred HHHHHhccCcccHHHHHHHHHHHHhCCCcChhhEEEEEECHHHHHHHHHHHhccccCCCeEEEEEEccCCcchHH-----
Confidence 1111223455666666554443 2346899999999999999999999 999999999988543210
Q ss_pred hhcccccCChhhHHhhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHH
Q 020064 158 YEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAF 237 (331)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (331)
+. ..+...+. .........
T Consensus 622 --------~~---------------~~~~~~~~-------------------------~~~~~~~~~------------- 640 (723)
T 1xfd_A 622 --------YA---------------SAFSERYL-------------------------GLHGLDNRA------------- 640 (723)
T ss_dssp --------SB---------------HHHHHHHH-------------------------CCCSSCCSS-------------
T ss_pred --------hh---------------hhccHhhc-------------------------CCccCChhH-------------
Confidence 00 00000000 000000000
Q ss_pred hhhhhhhhhccCCCCCcchhhhhcccccc-ccEEEEecCCCCccCCcchHHHHHhC----CCCcEEEecCCCCCCCcCCc
Q 020064 238 ARIENHYFLNKGFFPSDSFLLDNIDNIRH-INATIVQGRYDVCCPMMSAWDLHKAW----PEADFKVVADAGHSANEPGI 312 (331)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-~P~l~i~G~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~~~~ 312 (331)
.. .......+.++ + +|+|+++|++|..+|++.++.+.+.+ +++++++++++||.+.....
T Consensus 641 -------------~~-~~~~~~~~~~~-~~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~ 705 (723)
T 1xfd_A 641 -------------YE-MTKVAHRVSAL-EEQQFLIIHPTADEKIHFQHTAELITQLIRGKANYSLQIYPDESHYFTSSSL 705 (723)
T ss_dssp -------------TT-TTCTHHHHTSC-CSCEEEEEEETTCSSSCHHHHHHHHHHHHHTTCCCEEEEETTCCSSCCCHHH
T ss_pred -------------HH-hcChhhHHhhc-CCCCEEEEEeCCCCCcCHhHHHHHHHHHHHCCCCeEEEEECCCCcccccCcc
Confidence 00 11233456677 6 79999999999999998888887776 46799999999999843334
Q ss_pred hhHHHHHHHHHHHhhh
Q 020064 313 AAELVATNEKLKNLIK 328 (331)
Q Consensus 313 ~~~~~~~i~~fl~~~~ 328 (331)
++++.+.+.+||++..
T Consensus 706 ~~~~~~~i~~fl~~~l 721 (723)
T 1xfd_A 706 KQHLYRSIINFFVECF 721 (723)
T ss_dssp HHHHHHHHHHHHTTTT
T ss_pred hHHHHHHHHHHHHHHh
Confidence 8999999999998754
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.89 E-value=9.4e-23 Score=182.24 Aligned_cols=225 Identities=13% Similarity=0.118 Sum_probs=145.3
Q ss_pred ccceeEeCCCceEEEEeCCCC------CCCcEEEeccCCCCCC---CC--CcccccC-CCCcEEEEecCCCCCCCCCCCC
Q 020064 23 STGILKVSDIHTIYWEQSGNP------TGHPVVFLHGGPGGGT---TP--SNRRFFD-PDFYRIILFDQRGAGKSTPHAC 90 (331)
Q Consensus 23 ~~~~~~~~~g~~l~~~~~g~~------~~~~vl~~HG~~~~~~---~~--~~~~~~~-~~g~~vi~~D~~G~G~s~~~~~ 90 (331)
+...+...+ .++.+....++ ..|+||++||++++.. .+ .+...++ ++||.|+++|+||+|.+.....
T Consensus 469 ~~~~~~~~~-~~l~~~~~~P~~~~~~~~~p~vl~~hG~~~~~~~~~~~~~~~~~~l~~~~G~~v~~~d~rG~g~~~~~~~ 547 (719)
T 1z68_A 469 EIKKLEVDE-ITLWYKMILPPQFDRSKKYPLLIQVYGGPCSQSVRSVFAVNWISYLASKEGMVIALVDGRGTAFQGDKLL 547 (719)
T ss_dssp EEEEEEETT-EEEEEEEEECTTCCSSSCEEEEEEECCCTTBCCCCCCCCCCHHHHHHHTTCCEEEEEECTTBSSSCHHHH
T ss_pred EEEEEecCC-eEEEEEEEeCCCCCCCCCccEEEEECCCCCcCcccccchhhHHHHHHhcCCeEEEEEcCCCCCCCchhhH
Confidence 345566666 67877655332 2357999999876532 12 2333443 6899999999999999863210
Q ss_pred ------CCccchHHHHHHHHHHHHH--hCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhccc
Q 020064 91 ------LDQNTTWDLIDDIEKLRQH--LEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGA 162 (331)
Q Consensus 91 ------~~~~~~~~~~~~~~~~~~~--~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~ 162 (331)
......+++.+.+..+.+. ++.++++++||||||.+++.++.++|++++++|++++.......
T Consensus 548 ~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~--------- 618 (719)
T 1z68_A 548 YAVYRKLGVYEVEDQITAVRKFIEMGFIDEKRIAIWGWSYGGYVSSLALASGTGLFKCGIAVAPVSSWEYY--------- 618 (719)
T ss_dssp GGGTTCTTHHHHHHHHHHHHHHHTTSCEEEEEEEEEEETHHHHHHHHHHTTSSSCCSEEEEESCCCCTTTS---------
T ss_pred HHHhhccCcccHHHHHHHHHHHHhcCCCCCceEEEEEECHHHHHHHHHHHhCCCceEEEEEcCCccChHHh---------
Confidence 0112344444444444442 12368999999999999999999999999999999886532100
Q ss_pred ccCChhhHHhhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhh
Q 020064 163 AAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIEN 242 (331)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (331)
.. .+...+... .. ....... +.
T Consensus 619 ----~~---------------~~~~~~~g~---~~--------------------~~~~~~~------------~~---- 640 (719)
T 1z68_A 619 ----AS---------------VYTERFMGL---PT--------------------KDDNLEH------------YK---- 640 (719)
T ss_dssp ----BH---------------HHHHHHHCC---SS--------------------TTTTHHH------------HH----
T ss_pred ----cc---------------ccchhhcCC---cc--------------------cccchhh------------hh----
Confidence 00 000000000 00 0000000 00
Q ss_pred hhhhccCCCCCcchhhhhccccccc-cEEEEecCCCCccCCcchHHHHHhCC----CCcEEEecCCCCCCCcCCchhHHH
Q 020064 243 HYFLNKGFFPSDSFLLDNIDNIRHI-NATIVQGRYDVCCPMMSAWDLHKAWP----EADFKVVADAGHSANEPGIAAELV 317 (331)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~l~~i~~~-P~l~i~G~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~~~~~~~~~ 317 (331)
..+....+.++ ++ |+|+++|++|..+|++.++.+.+.++ +.++++++++||.+..+ .++++.
T Consensus 641 -----------~~~~~~~~~~~-~~~P~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~~~~-~~~~~~ 707 (719)
T 1z68_A 641 -----------NSTVMARAEYF-RNVDYLLIHGTADDNVHFQNSAQIAKALVNAQVDFQAMWYSDQNHGLSGL-STNHLY 707 (719)
T ss_dssp -----------HTCSGGGGGGG-TTSEEEEEEETTCSSSCTHHHHHHHHHHHHTTCCCEEEEETTCCTTCCTH-HHHHHH
T ss_pred -----------hCCHhHHHhcC-CCCcEEEEEeCCCCCcCHHHHHHHHHHHHHCCCceEEEEECcCCCCCCcc-cHHHHH
Confidence 11122345667 47 89999999999999999888888763 45799999999999555 489999
Q ss_pred HHHHHHHHhhh
Q 020064 318 ATNEKLKNLIK 328 (331)
Q Consensus 318 ~~i~~fl~~~~ 328 (331)
+.+.+|+++..
T Consensus 708 ~~i~~fl~~~l 718 (719)
T 1z68_A 708 THMTHFLKQCF 718 (719)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhh
Confidence 99999998754
|
| >1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP: c.69.1.2 PDB: 1lzk_A | Back alignment and structure |
|---|
Probab=99.89 E-value=2.6e-23 Score=167.91 Aligned_cols=126 Identities=18% Similarity=0.031 Sum_probs=83.6
Q ss_pred CccceeEeCCCc-eEEEEeC----CCCCCCcEEEeccCC---CCCC-CCCcccccCC-CCcEEEEecCCCCCCCCCCCCC
Q 020064 22 YSTGILKVSDIH-TIYWEQS----GNPTGHPVVFLHGGP---GGGT-TPSNRRFFDP-DFYRIILFDQRGAGKSTPHACL 91 (331)
Q Consensus 22 ~~~~~~~~~~g~-~l~~~~~----g~~~~~~vl~~HG~~---~~~~-~~~~~~~~~~-~g~~vi~~D~~G~G~s~~~~~~ 91 (331)
.+...+...+|. .+.++.+ +..+.|+||++||++ ++.. +......+.+ .||.|+++|+||+|.+..+.
T Consensus 51 ~~~~~i~~~~g~~~l~~~~~~P~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~G~~Vv~~d~rg~~~~~~~~-- 128 (323)
T 1lzl_A 51 LRELSAPGLDGDPEVKIRFVTPDNTAGPVPVLLWIHGGGFAIGTAESSDPFCVEVARELGFAVANVEYRLAPETTFPG-- 128 (323)
T ss_dssp EEEEEECCSTTCCCEEEEEEEESSCCSCEEEEEEECCSTTTSCCGGGGHHHHHHHHHHHCCEEEEECCCCTTTSCTTH--
T ss_pred EEEEEecCCCCCceeEEEEEecCCCCCCCcEEEEECCCccccCChhhhHHHHHHHHHhcCcEEEEecCCCCCCCCCCc--
Confidence 344555556663 3443322 223457899999976 4433 3345555655 49999999999999886443
Q ss_pred CccchHHHHHHHHHHHHHhCC--CcEEEEEeChhHHHHHHHHHhCCC----ceeeEEEeccccc
Q 020064 92 DQNTTWDLIDDIEKLRQHLEI--PEWQVFGGSWGSTLALAYSLAHPD----KVTGLVLRGIFLL 149 (331)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~--~~v~lvG~S~Gg~~a~~~a~~~p~----~v~~li~~~~~~~ 149 (331)
...+..+.++.+.+.++.++. ++++|+|||+||.+++.++..+++ .++++|+++|...
T Consensus 129 ~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~ 192 (323)
T 1lzl_A 129 PVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKARDEGVVPVAFQFLEIPELD 192 (323)
T ss_dssp HHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHHCSSCCCEEEEESCCCC
T ss_pred hHHHHHHHHHHHHhhHHHcCCChhheEEEecCchHHHHHHHHHHHhhcCCCCeeEEEEECCccC
Confidence 112233334444444445555 589999999999999999988765 4999999998654
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.89 E-value=4e-22 Score=178.36 Aligned_cols=222 Identities=11% Similarity=0.107 Sum_probs=144.8
Q ss_pred eCCCceEEEEeCCCC------CCCcEEEeccCCCCCC----C-CCcccccC-CCCcEEEEecCCCCCCCCCCC------C
Q 020064 29 VSDIHTIYWEQSGNP------TGHPVVFLHGGPGGGT----T-PSNRRFFD-PDFYRIILFDQRGAGKSTPHA------C 90 (331)
Q Consensus 29 ~~~g~~l~~~~~g~~------~~~~vl~~HG~~~~~~----~-~~~~~~~~-~~g~~vi~~D~~G~G~s~~~~------~ 90 (331)
..+|..+.+....++ ..|+||++||++++.. + ..+...++ ++||.|+++|+||+|.+.... .
T Consensus 480 ~~dg~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~l~~~~G~~Vv~~D~rG~g~~g~~~~~~~~~~ 559 (740)
T 4a5s_A 480 ILNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVASFDGRGSGYQGDKIMHAINRR 559 (740)
T ss_dssp EETTEEEEEEEEECTTCCTTSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEEEECCTTCSSSCHHHHGGGTTC
T ss_pred ccCCeEEEEEEEeCCCCCCCCCccEEEEECCCCcccccccccCcCHHHHHHhcCCeEEEEEcCCCCCcCChhHHHHHHhh
Confidence 567878887755432 2367999999876522 1 12334444 589999999999999765321 1
Q ss_pred CCccchHHHHHHHHHHHHH--hCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChh
Q 020064 91 LDQNTTWDLIDDIEKLRQH--LEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPD 168 (331)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~--~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (331)
......+++.+.+..+.+. ++.++++|+||||||.+++.++.++|++++++|+++|....... ..
T Consensus 560 ~~~~~~~D~~~~i~~l~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~-------------~~ 626 (740)
T 4a5s_A 560 LGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSRWEYY-------------DS 626 (740)
T ss_dssp TTSHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHTTTCSCCSEEEEESCCCCGGGS-------------BH
T ss_pred hCcccHHHHHHHHHHHHhcCCcCCccEEEEEECHHHHHHHHHHHhCCCceeEEEEcCCccchHHh-------------hh
Confidence 1122345555555544422 12368999999999999999999999999999999986542100 00
Q ss_pred hHHhhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhcc
Q 020064 169 AWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNK 248 (331)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (331)
. +...+..... ....++.+.
T Consensus 627 ~---------------~~~~~~~~p~-----------------------~~~~~~~~~---------------------- 646 (740)
T 4a5s_A 627 V---------------YTERYMGLPT-----------------------PEDNLDHYR---------------------- 646 (740)
T ss_dssp H---------------HHHHHHCCSS-----------------------TTTTHHHHH----------------------
T ss_pred H---------------HHHHHcCCCC-----------------------ccccHHHHH----------------------
Confidence 0 0000000000 000000000
Q ss_pred CCCCCcchhhhhccccccc-cEEEEecCCCCccCCcchHHHHHhC----CCCcEEEecCCCCCCCcCCchhHHHHHHHHH
Q 020064 249 GFFPSDSFLLDNIDNIRHI-NATIVQGRYDVCCPMMSAWDLHKAW----PEADFKVVADAGHSANEPGIAAELVATNEKL 323 (331)
Q Consensus 249 ~~~~~~~~~~~~l~~i~~~-P~l~i~G~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~f 323 (331)
.......+.++ ++ |+|+++|++|..+|++.++.+.+.+ .+.+++++|++||.+.....++.+.+.+.+|
T Consensus 647 -----~~~~~~~~~~i-~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~f 720 (740)
T 4a5s_A 647 -----NSTVMSRAENF-KQVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMWYTDEDHGIASSTAHQHIYTHMSHF 720 (740)
T ss_dssp -----HSCSGGGGGGG-GGSEEEEEEETTCSSSCTHHHHHHHHHHHHTTCCCEEEEETTCCTTCCSHHHHHHHHHHHHHH
T ss_pred -----hCCHHHHHhcC-CCCcEEEEEcCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCcCCCCccHHHHHHHHHHH
Confidence 11223356677 46 9999999999999999888888776 3568999999999984433489999999999
Q ss_pred HHhhhc
Q 020064 324 KNLIKN 329 (331)
Q Consensus 324 l~~~~~ 329 (331)
|++..+
T Consensus 721 l~~~l~ 726 (740)
T 4a5s_A 721 IKQCFS 726 (740)
T ss_dssp HHHHTT
T ss_pred HHHHcC
Confidence 988654
|
| >3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A | Back alignment and structure |
|---|
Probab=99.89 E-value=2e-22 Score=162.64 Aligned_cols=224 Identities=11% Similarity=-0.015 Sum_probs=139.5
Q ss_pred CCCcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHh-CCCcEEEEEeCh
Q 020064 44 TGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHL-EIPEWQVFGGSW 122 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~lvG~S~ 122 (331)
++++|+|+||++++...|......+..+|+|+++|+||+|.+... ..+++++++++.+.+..+ +.++++|+||||
T Consensus 100 ~~~~l~~lhg~~~~~~~~~~l~~~L~~~~~v~~~d~~g~~~~~~~----~~~~~~~a~~~~~~i~~~~~~~~~~l~G~S~ 175 (329)
T 3tej_A 100 NGPTLFCFHPASGFAWQFSVLSRYLDPQWSIIGIQSPRPNGPMQT----AANLDEVCEAHLATLLEQQPHGPYYLLGYSL 175 (329)
T ss_dssp SSCEEEEECCTTSCCGGGGGGGGTSCTTCEEEEECCCTTTSHHHH----CSSHHHHHHHHHHHHHHHCSSSCEEEEEETH
T ss_pred CCCcEEEEeCCcccchHHHHHHHhcCCCCeEEEeeCCCCCCCCCC----CCCHHHHHHHHHHHHHHhCCCCCEEEEEEcc
Confidence 678999999977765555444444478999999999999887532 347899999987777766 567999999999
Q ss_pred hHHHHHHHHHh---CCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhccccCCCchH
Q 020064 123 GSTLALAYSLA---HPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKE 199 (331)
Q Consensus 123 Gg~~a~~~a~~---~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (331)
||.+++.+|.+ +|+++.+++++++............ ............
T Consensus 176 Gg~ia~~~a~~L~~~~~~v~~lvl~d~~~~~~~~~~~~~---------------~~~~~~~~~~~~-------------- 226 (329)
T 3tej_A 176 GGTLAQGIAARLRARGEQVAFLGLLDTWPPETQNWQEKE---------------ANGLDPEVLAEI-------------- 226 (329)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEEESCCCTHHHHTC--------------------CCCCTHHHHH--------------
T ss_pred CHHHHHHHHHHHHhcCCcccEEEEeCCCCCCcccccccc---------------ccccChhhHHHH--------------
Confidence 99999999999 9999999999998765321100000 000000000000
Q ss_pred HHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCCCc
Q 020064 200 TQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVC 279 (331)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~ 279 (331)
......+. ...........+.. +...+.... ... .......+ ++|++++.|++|..
T Consensus 227 -----~~~~~~~~-~~~~~~~~~~~~~~-----~~~~~~~~~-~~~-----------~~~~~~~~-~~pv~l~~~~~d~~ 282 (329)
T 3tej_A 227 -----NREREAFL-AAQQGSTSTELFTT-----IEGNYADAV-RLL-----------TTAHSVPF-DGKATLFVAERTLQ 282 (329)
T ss_dssp -----HHHHHHHH-HTTCCCSCCHHHHH-----HHHHHHHHH-HHH-----------TTCCCCCE-EEEEEEEEEGGGCC
T ss_pred -----HHHHHHHH-HhccccccHHHHHH-----HHHHHHHHH-HHH-----------hcCCCCCc-CCCeEEEEeccCCC
Confidence 00000000 00000000000000 000000000 000 00013456 69999999999998
Q ss_pred cCCcchHHHHHhCCCCcEEEecCCCCCCCcCC-chhHHHHHHHHHHH
Q 020064 280 CPMMSAWDLHKAWPEADFKVVADAGHSANEPG-IAAELVATNEKLKN 325 (331)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~-~~~~~~~~i~~fl~ 325 (331)
.+.+....+.+..++.+++.++ +||+.+.+. ..+.+.+.|.+|++
T Consensus 283 ~~~~~~~~w~~~~~~~~~~~v~-g~H~~~~~~~~~~~ia~~l~~~L~ 328 (329)
T 3tej_A 283 EGMSPERAWSPWIAELDIYRQD-CAHVDIISPGTFEKIGPIIRATLN 328 (329)
T ss_dssp TTCCHHHHHTTTEEEEEEEEES-SCGGGGGSTTTHHHHHHHHHHHHC
T ss_pred CCCCchhhHHHhcCCcEEEEec-CChHHhCCChHHHHHHHHHHHHhc
Confidence 8877667777777888999998 899876654 24789999999885
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=99.89 E-value=2.7e-22 Score=179.44 Aligned_cols=233 Identities=15% Similarity=0.039 Sum_probs=141.6
Q ss_pred CccceeEeCCCceEEEEeCC----CCCCCcEEEeccCCCCCC---CCCcccccCCCCcEEEEecCCCCCCCCCC------
Q 020064 22 YSTGILKVSDIHTIYWEQSG----NPTGHPVVFLHGGPGGGT---TPSNRRFFDPDFYRIILFDQRGAGKSTPH------ 88 (331)
Q Consensus 22 ~~~~~~~~~~g~~l~~~~~g----~~~~~~vl~~HG~~~~~~---~~~~~~~~~~~g~~vi~~D~~G~G~s~~~------ 88 (331)
.+...+...+|.++.+.... ..+.|+||++||++++.. +......++++||.|+++|+||+|.+...
T Consensus 461 ~~~~~~~~~dg~~i~~~~~~p~~~~~~~p~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~g~~~~~~~~ 540 (741)
T 1yr2_A 461 VEQVFYPSKDGTKVPMFIVRRKDAKGPLPTLLYGYGGFNVALTPWFSAGFMTWIDSGGAFALANLRGGGEYGDAWHDAGR 540 (741)
T ss_dssp EEEEEEECTTSCEEEEEEEEETTCCSCCCEEEECCCCTTCCCCCCCCHHHHHHHTTTCEEEEECCTTSSTTHHHHHHTTS
T ss_pred EEEEEEEcCCCCEEEEEEEecCCCCCCCcEEEEECCCCCccCCCCcCHHHHHHHHCCcEEEEEecCCCCCCCHHHHHhhh
Confidence 34556677788888776543 224688999999766533 22334456789999999999999987321
Q ss_pred CCCCccchHHHHHHHHHHHHH--hCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCC
Q 020064 89 ACLDQNTTWDLIDDIEKLRQH--LEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIY 166 (331)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~--~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~ 166 (331)
.......++++.+.+..+++. .+.++++++|||+||.+++.++.++|++++++|+.++........
T Consensus 541 ~~~~~~~~~D~~~~~~~l~~~~~~~~~ri~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~~------------ 608 (741)
T 1yr2_A 541 RDKKQNVFDDFIAAGEWLIANGVTPRHGLAIEGGSNGGLLIGAVTNQRPDLFAAASPAVGVMDMLRFD------------ 608 (741)
T ss_dssp GGGTHHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTSGG------------
T ss_pred hhcCCCcHHHHHHHHHHHHHcCCCChHHEEEEEECHHHHHHHHHHHhCchhheEEEecCCcccccccc------------
Confidence 100122456666666666654 245689999999999999999999999999999998865321100
Q ss_pred hhhHHhhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhh
Q 020064 167 PDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFL 246 (331)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (331)
... ........+ ... ..++.. ..+.
T Consensus 609 ---------~~~--~~~~~~~~~----g~~-----------------------~~~~~~---------~~~~-------- 633 (741)
T 1yr2_A 609 ---------QFT--AGRYWVDDY----GYP-----------------------EKEADW---------RVLR-------- 633 (741)
T ss_dssp ---------GST--TGGGGHHHH----CCT-----------------------TSHHHH---------HHHH--------
T ss_pred ---------CCC--CCchhHHHc----CCC-----------------------CCHHHH---------HHHH--------
Confidence 000 000000000 000 000000 0000
Q ss_pred ccCCCCCcchhhhhccc-cccc-cEEEEecCCCCccCCcchHHHHHhCCC-------CcEEEecCCCCCCCcCC-chhHH
Q 020064 247 NKGFFPSDSFLLDNIDN-IRHI-NATIVQGRYDVCCPMMSAWDLHKAWPE-------ADFKVVADAGHSANEPG-IAAEL 316 (331)
Q Consensus 247 ~~~~~~~~~~~~~~l~~-i~~~-P~l~i~G~~D~~~~~~~~~~~~~~~~~-------~~~~~~~~~gH~~~~~~-~~~~~ 316 (331)
.......+.+ + ++ |+|+++|++|..+|+..+.++.+.++. +++++++++||.+..+. ...++
T Consensus 634 -------~~sp~~~~~~~~-~~~P~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~g~~~~l~~~~~~gH~~~~~~~~~~~~ 705 (741)
T 1yr2_A 634 -------RYSPYHNVRSGV-DYPAILVTTADTDDRVVPGHSFKYTAALQTAAIGPKPHLIRIETRAGHGSGKPIDKQIEE 705 (741)
T ss_dssp -------TTCGGGCCCTTS-CCCEEEEEECSCCSSSCTHHHHHHHHHHHHSCCCSSCEEEEEC---------CHHHHHHH
T ss_pred -------HcCchhhhhccC-CCCCEEEEeeCCCCCCChhHHHHHHHHHhhhhcCCCCEEEEEeCCCCcCCCCCHHHHHHH
Confidence 0111223444 5 45 999999999999999988888877644 68899999999986542 24578
Q ss_pred HHHHHHHHHhhhc
Q 020064 317 VATNEKLKNLIKN 329 (331)
Q Consensus 317 ~~~i~~fl~~~~~ 329 (331)
.+.+.+||.+..+
T Consensus 706 ~~~~~~fl~~~l~ 718 (741)
T 1yr2_A 706 TADVQAFLAHFTG 718 (741)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcC
Confidence 8899999987653
|
| >4e15_A Kynurenine formamidase; alpha/beta hydrolase fold, hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A {Drosophila melanogaster} PDB: 4e14_A* 4e11_A | Back alignment and structure |
|---|
Probab=99.89 E-value=1.1e-23 Score=168.57 Aligned_cols=199 Identities=15% Similarity=0.042 Sum_probs=128.1
Q ss_pred CCCCcEEEeccCCC---C-CCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHH---HHHhCCCcE
Q 020064 43 PTGHPVVFLHGGPG---G-GTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKL---RQHLEIPEW 115 (331)
Q Consensus 43 ~~~~~vl~~HG~~~---~-~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~v 115 (331)
...|+||++||++. + ..+......+.++||.|+++|+||+|.+..+ ...+++.+.+..+ .+.++.+++
T Consensus 80 ~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~r~~~~~~~~-----~~~~d~~~~~~~l~~~~~~~~~~~i 154 (303)
T 4e15_A 80 NQAPLFVFVHGGYWQEMDMSMSCSIVGPLVRRGYRVAVMDYNLCPQVTLE-----QLMTQFTHFLNWIFDYTEMTKVSSL 154 (303)
T ss_dssp TTCCEEEEECCSTTTSCCGGGSCTTHHHHHHTTCEEEEECCCCTTTSCHH-----HHHHHHHHHHHHHHHHHHHTTCSCE
T ss_pred CCCCEEEEECCCcCcCCChhHHHHHHHHHHhCCCEEEEecCCCCCCCChh-----HHHHHHHHHHHHHHHHhhhcCCCeE
Confidence 35688999999542 2 2234455666678999999999999876422 2233333333333 346677899
Q ss_pred EEEEeChhHHHHHHHHHhCC-------CceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHh
Q 020064 116 QVFGGSWGSTLALAYSLAHP-------DKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDA 188 (331)
Q Consensus 116 ~lvG~S~Gg~~a~~~a~~~p-------~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (331)
+|+|||+||.+++.++.+.+ ++++++|++++......... ... .....
T Consensus 155 ~l~G~S~GG~la~~~a~~~~~~~~p~~~~v~~~v~~~~~~~~~~~~~--------------------~~~-----~~~~~ 209 (303)
T 4e15_A 155 TFAGHXAGAHLLAQILMRPNVITAQRSKMVWALIFLCGVYDLRELSN--------------------LES-----VNPKN 209 (303)
T ss_dssp EEEEETHHHHHHGGGGGCTTTSCHHHHHTEEEEEEESCCCCCHHHHT--------------------CTT-----TSGGG
T ss_pred EEEeecHHHHHHHHHHhccccccCcccccccEEEEEeeeeccHhhhc--------------------ccc-----cchhh
Confidence 99999999999999998654 37999999998654321100 000 00000
Q ss_pred hccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhc----ccc
Q 020064 189 YSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNI----DNI 264 (331)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----~~i 264 (331)
. + ...++.... .......+ .++
T Consensus 210 ~---~-------------------------~~~~~~~~~--------------------------~sp~~~~~~~~~~~~ 235 (303)
T 4e15_A 210 I---L-------------------------GLNERNIES--------------------------VSPMLWEYTDVTVWN 235 (303)
T ss_dssp T---T-------------------------CCCTTTTTT--------------------------TCGGGCCCCCGGGGT
T ss_pred h---h-------------------------cCCHHHHHH--------------------------cCchhhcccccccCC
Confidence 0 0 000000000 00010112 234
Q ss_pred ccccEEEEecCCCCccCCcchHHHHHhCC----CCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhh
Q 020064 265 RHINATIVQGRYDVCCPMMSAWDLHKAWP----EADFKVVADAGHSANEPGIAAELVATNEKLKNLI 327 (331)
Q Consensus 265 ~~~P~l~i~G~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 327 (331)
++|+|+++|++|..++.+.++.+.+.++ ++++++++++||+...+. .......+.+|+...
T Consensus 236 -~~P~lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~-~~~~~~~l~~~l~~~ 300 (303)
T 4e15_A 236 -STKIYVVAAEHDSTTFIEQSRHYADVLRKKGYKASFTLFKGYDHFDIIEE-TAIDDSDVSRFLRNI 300 (303)
T ss_dssp -TSEEEEEEEEESCHHHHHHHHHHHHHHHHHTCCEEEEEEEEEETTHHHHG-GGSTTSHHHHHHHHH
T ss_pred -CCCEEEEEeCCCCCCchHHHHHHHHHHHHCCCceEEEEeCCCCchHHHHH-HhCCCcHHHHHHHHh
Confidence 4999999999999999999998888774 578999999999887775 666677777777543
|
| >2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.65A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.8e-21 Score=153.23 Aligned_cols=244 Identities=15% Similarity=0.072 Sum_probs=137.1
Q ss_pred ceeEeCCCceEEEEeCCCCCCCcEEEeccCC---CCCC-CCC-cccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHH
Q 020064 25 GILKVSDIHTIYWEQSGNPTGHPVVFLHGGP---GGGT-TPS-NRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDL 99 (331)
Q Consensus 25 ~~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~---~~~~-~~~-~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~ 99 (331)
..+++.+|..+++........|+||++|||+ ++.. ++. ....+.+.||+|+++|+|+.+.. .+...
T Consensus 7 ~~~~~~~~~~~~~y~p~~~~~p~iv~~HGGg~~~g~~~~~~~~~~~~l~~~g~~Vi~vdYrlaPe~---------~~p~~ 77 (274)
T 2qru_A 7 NNQTLANGATVTIYPTTTEPTNYVVYLHGGGMIYGTKSDLPEELKELFTSNGYTVLALDYLLAPNT---------KIDHI 77 (274)
T ss_dssp EEEECTTSCEEEEECCSSSSCEEEEEECCSTTTSCCGGGCCHHHHHHHHTTTEEEEEECCCCTTTS---------CHHHH
T ss_pred ccccccCCeeEEEEcCCCCCCcEEEEEeCccccCCChhhchHHHHHHHHHCCCEEEEeCCCCCCCC---------CCcHH
Confidence 4566667777776544323567899999976 3322 222 34445577999999999985432 33444
Q ss_pred HHHHHHHHH----HhC-CCcEEEEEeChhHHHHHHHHH---hCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHH
Q 020064 100 IDDIEKLRQ----HLE-IPEWQVFGGSWGSTLALAYSL---AHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWE 171 (331)
Q Consensus 100 ~~~~~~~~~----~~~-~~~v~lvG~S~Gg~~a~~~a~---~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (331)
++|+.++++ ... .++++|+|+|+||.+|+.++. ..+.++++++++.+......... ......+
T Consensus 78 ~~D~~~al~~l~~~~~~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~~~~~vl~~~~~~~~~~~~-----~~~~~~~---- 148 (274)
T 2qru_A 78 LRTLTETFQLLNEEIIQNQSFGLCGRSAGGYLMLQLTKQLQTLNLTPQFLVNFYGYTDLEFIKE-----PRKLLKQ---- 148 (274)
T ss_dssp HHHHHHHHHHHHHHTTTTCCEEEEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCSCSGGGGS-----CCCSCSS----
T ss_pred HHHHHHHHHHHHhccccCCcEEEEEECHHHHHHHHHHHHHhcCCCCceEEEEEcccccccccCC-----chhhccc----
Confidence 555555444 433 789999999999999999997 35778999998876543110000 0000000
Q ss_pred hhhccCCcchhhhhHHhhcc--ccCCCchHHHHH---HHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhh
Q 020064 172 SFRDLIPENERSCFVDAYSK--RLNSDDKETQYA---AARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFL 246 (331)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (331)
.+... ....+.. ............ .......|.....
T Consensus 149 ----~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------ 190 (274)
T 2qru_A 149 ----AISAK----EIAAIDQTKPVWDDPFLSRYLLYHYSIQQALLPHFYG------------------------------ 190 (274)
T ss_dssp ----CCCSG----GGTTSCCSSCCSCCTTCTTHHHHHHHHHTTCHHHHHT------------------------------
T ss_pred ----cccHH----HHhhhcccCCCCCCccccchhhhhhhhhhcchhhccC------------------------------
Confidence 00000 0000000 000000000000 0000000000000
Q ss_pred ccCCC-CCcchh-hhhccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCC---chhHHHHHHH
Q 020064 247 NKGFF-PSDSFL-LDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPG---IAAELVATNE 321 (331)
Q Consensus 247 ~~~~~-~~~~~~-~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~---~~~~~~~~i~ 321 (331)
..... ...... ...+..+ .|+|+++|+.|+.++...++++.+.+++++++++++++|.++.+. ..+++.+.+.
T Consensus 191 ~~~~~~~~~~~~~~~~l~~l--pP~li~~G~~D~~~~~~~~~~l~~~~~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~ 268 (274)
T 2qru_A 191 LPENGDWSAYALSDETLKTF--PPCFSTASSSDEEVPFRYSKKIGRTIPESTFKAVYYLEHDFLKQTKDPSVITLFEQLD 268 (274)
T ss_dssp CCTTSCCGGGCCCHHHHHTS--CCEEEEEETTCSSSCTHHHHHHHHHSTTCEEEEECSCCSCGGGGTTSHHHHHHHHHHH
T ss_pred cccccccccCCCChhhhcCC--CCEEEEEecCCCCcCHHHHHHHHHhCCCcEEEEcCCCCcCCccCcCCHHHHHHHHHHH
Confidence 00000 000001 1134444 599999999999999888999999999999999999999986542 1336688888
Q ss_pred HHHHh
Q 020064 322 KLKNL 326 (331)
Q Consensus 322 ~fl~~ 326 (331)
+||++
T Consensus 269 ~fl~~ 273 (274)
T 2qru_A 269 SWLKE 273 (274)
T ss_dssp HHHHT
T ss_pred HHHhh
Confidence 88864
|
| >2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A {Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A 1qz3_A | Back alignment and structure |
|---|
Probab=99.88 E-value=3.9e-23 Score=165.94 Aligned_cols=123 Identities=19% Similarity=0.102 Sum_probs=83.6
Q ss_pred CCccceeEeCCCceEEEEeCCC----CCCCcEEEeccCC---CCCC-CCCcccccCCC-CcEEEEecCCCCCCCCCCCCC
Q 020064 21 PYSTGILKVSDIHTIYWEQSGN----PTGHPVVFLHGGP---GGGT-TPSNRRFFDPD-FYRIILFDQRGAGKSTPHACL 91 (331)
Q Consensus 21 ~~~~~~~~~~~g~~l~~~~~g~----~~~~~vl~~HG~~---~~~~-~~~~~~~~~~~-g~~vi~~D~~G~G~s~~~~~~ 91 (331)
..+...+...+| ++.++.+.+ .+.|+||++||++ ++.. +..++..+.++ ||.|+++|+||+|.+..+.
T Consensus 47 ~~~~~~i~~~~g-~l~~~~~~P~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~d~rg~~~~~~~~-- 123 (310)
T 2hm7_A 47 EVREFDMDLPGR-TLKVRMYRPEGVEPPYPALVYYHGGSWVVGDLETHDPVCRVLAKDGRAVVFSVDYRLAPEHKFPA-- 123 (310)
T ss_dssp EEEEEEEEETTE-EEEEEEEECTTCCSSEEEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTSCTTH--
T ss_pred eEEEEEeccCCC-eEEEEEEecCCCCCCCCEEEEECCCccccCChhHhHHHHHHHHHhcCCEEEEeCCCCCCCCCCCc--
Confidence 344556677777 776554432 2357899999943 3333 34455556554 9999999999999875332
Q ss_pred CccchHHHHHHHHHHHHH---hC--CCcEEEEEeChhHHHHHHHHHhCCC----ceeeEEEeccccc
Q 020064 92 DQNTTWDLIDDIEKLRQH---LE--IPEWQVFGGSWGSTLALAYSLAHPD----KVTGLVLRGIFLL 149 (331)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~---~~--~~~v~lvG~S~Gg~~a~~~a~~~p~----~v~~li~~~~~~~ 149 (331)
..++..+.+..+.+. ++ .++++|+|||+||.+++.+|.++|+ +++++|+++|...
T Consensus 124 ---~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~v~~~vl~~p~~~ 187 (310)
T 2hm7_A 124 ---AVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQLLIYPSTG 187 (310)
T ss_dssp ---HHHHHHHHHHHHHHTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCCCEEEESCCCC
T ss_pred ---cHHHHHHHHHHHHhhHHHhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCceEEEEEcCCcC
Confidence 233333333333332 23 4689999999999999999998876 6999999998654
|
| >3fle_A SE_1780 protein; structural genomics, APC61035.1, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.01A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=99.88 E-value=4.6e-22 Score=152.27 Aligned_cols=203 Identities=13% Similarity=0.016 Sum_probs=128.5
Q ss_pred CCCcEEEeccCCCC-CCCCCcccccCCCCc--EEEEecCCCCCCCCCCC----------------CCCccchHHHHHHHH
Q 020064 44 TGHPVVFLHGGPGG-GTTPSNRRFFDPDFY--RIILFDQRGAGKSTPHA----------------CLDQNTTWDLIDDIE 104 (331)
Q Consensus 44 ~~~~vl~~HG~~~~-~~~~~~~~~~~~~g~--~vi~~D~~G~G~s~~~~----------------~~~~~~~~~~~~~~~ 104 (331)
+++||||+||++++ ..|..++..+.+.|+ +|+.+|.+++|.+.... .....++.++++++.
T Consensus 5 ~~~pvvliHG~~~~~~~~~~l~~~L~~~g~~~~vi~~dv~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~~~~~l~ 84 (249)
T 3fle_A 5 KTTATLFLHGYGGSERSETFMVKQALNKNVTNEVITARVSSEGKVYFDKKLSEDAANPIVKVEFKDNKNGNFKENAYWIK 84 (249)
T ss_dssp CCEEEEEECCTTCCGGGTHHHHHHHHTTTSCSCEEEEEECSSCCEEESSCCC--CCSCEEEEEESSTTCCCHHHHHHHHH
T ss_pred CCCcEEEECCCCCChhHHHHHHHHHHHcCCCceEEEEEECCCCCEEEccccccccCCCeEEEEcCCCCCccHHHHHHHHH
Confidence 56789999997766 455667777777775 79999999988752110 001224444555555
Q ss_pred HHH----HHhCCCcEEEEEeChhHHHHHHHHHhCCC-----ceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhc
Q 020064 105 KLR----QHLEIPEWQVFGGSWGSTLALAYSLAHPD-----KVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRD 175 (331)
Q Consensus 105 ~~~----~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~-----~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (331)
+++ +.++.++++++||||||.+++.++.++|+ +|+++|+++++........
T Consensus 85 ~~i~~l~~~~~~~~~~lvGHSmGG~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~-------------------- 144 (249)
T 3fle_A 85 EVLSQLKSQFGIQQFNFVGHSMGNMSFAFYMKNYGDDRHLPQLKKEVNIAGVYNGILNMN-------------------- 144 (249)
T ss_dssp HHHHHHHHTTCCCEEEEEEETHHHHHHHHHHHHHSSCSSSCEEEEEEEESCCTTCCTTTS--------------------
T ss_pred HHHHHHHHHhCCCceEEEEECccHHHHHHHHHHCcccccccccceEEEeCCccCCccccc--------------------
Confidence 544 45588999999999999999999999874 7999999998654211000
Q ss_pred cCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcc
Q 020064 176 LIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDS 255 (331)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (331)
.+.. .. .+... ..+ ......+.. ..
T Consensus 145 -~~~~-~~----~~~~~-g~p------------------------------~~~~~~~~~------------------l~ 169 (249)
T 3fle_A 145 -ENVN-EI----IVDKQ-GKP------------------------------SRMNAAYRQ------------------LL 169 (249)
T ss_dssp -SCTT-TS----CBCTT-CCB------------------------------SSCCHHHHH------------------TG
T ss_pred -CCcc-hh----hhccc-CCC------------------------------cccCHHHHH------------------HH
Confidence 0000 00 00000 000 000000000 00
Q ss_pred hhhhhccccccccEEEEecC------CCCccCCcchHHHHHhCCCC----cEEEecC--CCCCCCcCCchhHHHHHHHHH
Q 020064 256 FLLDNIDNIRHINATIVQGR------YDVCCPMMSAWDLHKAWPEA----DFKVVAD--AGHSANEPGIAAELVATNEKL 323 (331)
Q Consensus 256 ~~~~~l~~i~~~P~l~i~G~------~D~~~~~~~~~~~~~~~~~~----~~~~~~~--~gH~~~~~~~~~~~~~~i~~f 323 (331)
.....+.+. ++|+|.|+|+ .|-.||...++.+...+++. +.+++.| +.|....++ +++.+.|.+|
T Consensus 170 ~~~~~~p~~-~~~vl~I~G~~~~~~~sDG~V~~~Sa~~~~~l~~~~~~~y~e~~v~g~~a~Hs~l~~n--~~V~~~I~~F 246 (249)
T 3fle_A 170 SLYKIYCGK-EIEVLNIYGDLEDGSHSDGRVSNSSSQSLQYLLRGSTKSYQEMKFKGAKAQHSQLHEN--KDVANEIIQF 246 (249)
T ss_dssp GGHHHHTTT-TCEEEEEEEECCSSSCBSSSSBHHHHHTHHHHSTTCSSEEEEEEEESGGGSTGGGGGC--HHHHHHHHHH
T ss_pred HHHhhCCcc-CCeEEEEeccCCCCCCCCCcccHHHHHHHHHHHhhCCCceEEEEEeCCCCchhccccC--HHHHHHHHHH
Confidence 122334444 6999999998 69999999888887777542 4455655 899988884 4889999999
Q ss_pred H
Q 020064 324 K 324 (331)
Q Consensus 324 l 324 (331)
|
T Consensus 247 L 247 (249)
T 3fle_A 247 L 247 (249)
T ss_dssp H
T ss_pred h
Confidence 7
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=8.8e-22 Score=175.43 Aligned_cols=233 Identities=17% Similarity=0.087 Sum_probs=147.4
Q ss_pred CccceeEeCCCceEEEEeCC------CCCCCcEEEeccCCCCCCCC---CcccccCC-CCcEEEEecCCCCCCCCCC---
Q 020064 22 YSTGILKVSDIHTIYWEQSG------NPTGHPVVFLHGGPGGGTTP---SNRRFFDP-DFYRIILFDQRGAGKSTPH--- 88 (331)
Q Consensus 22 ~~~~~~~~~~g~~l~~~~~g------~~~~~~vl~~HG~~~~~~~~---~~~~~~~~-~g~~vi~~D~~G~G~s~~~--- 88 (331)
.+...+...||.++.+.... ..+.|+||++||+++....+ .....+++ +||.|+++|+||+|.+...
T Consensus 437 ~~~~~~~~~dg~~i~~~~~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~~G~~v~~~d~rG~g~~g~~~~~ 516 (710)
T 2xdw_A 437 TVQIFYPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWHK 516 (710)
T ss_dssp EEEEEEECTTSCEEEEEEEEETTCCCSSCSCEEEECCCCTTCCCCCCCCHHHHHHHHHHCCEEEEECCTTSSTTHHHHHH
T ss_pred EEEEEEEcCCCCEEEEEEEecCCCCCCCCccEEEEEcCCCCCcCCCcccHHHHHHHHhCCcEEEEEccCCCCCCChHHHH
Confidence 34456677788888765432 12467899999976653322 22345667 8999999999999976421
Q ss_pred ---CCCCccchHHHHHHHHHHHHH--hCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccc
Q 020064 89 ---ACLDQNTTWDLIDDIEKLRQH--LEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAA 163 (331)
Q Consensus 89 ---~~~~~~~~~~~~~~~~~~~~~--~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~ 163 (331)
.......++++.+.+..+++. .+.++++++|||+||++++.++.++|++++++|+.++.........
T Consensus 517 ~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~a~~~p~~~~~~v~~~~~~d~~~~~~-------- 588 (710)
T 2xdw_A 517 GGILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMDMLKFHK-------- 588 (710)
T ss_dssp TTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGG--------
T ss_pred hhhhhcCCchHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHHhCccceeEEEEcCCcccHhhccc--------
Confidence 011123345566666665554 2446899999999999999999999999999999988654211000
Q ss_pred cCChhhHHhhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhh
Q 020064 164 AIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENH 243 (331)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (331)
. . ....+...+ .... .++. ...+.
T Consensus 589 ------------~-~--~~~~~~~~~----g~~~-----------------------~~~~---------~~~~~----- 612 (710)
T 2xdw_A 589 ------------Y-T--IGHAWTTDY----GCSD-----------------------SKQH---------FEWLI----- 612 (710)
T ss_dssp ------------S-T--TGGGGHHHH----CCTT-----------------------SHHH---------HHHHH-----
T ss_pred ------------c-C--CChhHHHhC----CCCC-----------------------CHHH---------HHHHH-----
Confidence 0 0 000000000 0000 0000 00000
Q ss_pred hhhccCCCCCcchhhhhcc-----ccccc-cEEEEecCCCCccCCcchHHHHHhCCC-----------CcEEEecCCCCC
Q 020064 244 YFLNKGFFPSDSFLLDNID-----NIRHI-NATIVQGRYDVCCPMMSAWDLHKAWPE-----------ADFKVVADAGHS 306 (331)
Q Consensus 244 ~~~~~~~~~~~~~~~~~l~-----~i~~~-P~l~i~G~~D~~~~~~~~~~~~~~~~~-----------~~~~~~~~~gH~ 306 (331)
.......+. ++ ++ |+|+++|++|..+|+..+.++.+.++. +++++++++||.
T Consensus 613 ----------~~sp~~~~~~~~~~~~-~~pP~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~ 681 (710)
T 2xdw_A 613 ----------KYSPLHNVKLPEADDI-QYPSMLLLTADHDDRVVPLHSLKFIATLQYIVGRSRKQNNPLLIHVDTKAGHG 681 (710)
T ss_dssp ----------HHCGGGCCCCCSSTTC-CCCEEEEEEETTCCSSCTHHHHHHHHHHHHHTTTSTTCCSCEEEEEESSCCSS
T ss_pred ----------HhCcHhhhcccccccC-CCCcEEEEEeCCCCccChhHHHHHHHHHHhhhccccCCCcCEEEEEeCCCCcC
Confidence 001112233 56 47 999999999999999988888776643 378899999999
Q ss_pred CCcCC-chhHHHHHHHHHHHhhhc
Q 020064 307 ANEPG-IAAELVATNEKLKNLIKN 329 (331)
Q Consensus 307 ~~~~~-~~~~~~~~i~~fl~~~~~ 329 (331)
+..+. ...+..+.+.+||.+..+
T Consensus 682 ~~~~~~~~~~~~~~~~~fl~~~l~ 705 (710)
T 2xdw_A 682 AGKPTAKVIEEVSDMFAFIARCLN 705 (710)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHHHHHHcC
Confidence 86642 256888899999987654
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=99.88 E-value=7.7e-22 Score=175.34 Aligned_cols=233 Identities=16% Similarity=0.071 Sum_probs=145.1
Q ss_pred CccceeEeCCCceEEEEeCC------CCCCCcEEEeccCCCCCC---CCCcccccCCCCcEEEEecCCCCCCCCCC---C
Q 020064 22 YSTGILKVSDIHTIYWEQSG------NPTGHPVVFLHGGPGGGT---TPSNRRFFDPDFYRIILFDQRGAGKSTPH---A 89 (331)
Q Consensus 22 ~~~~~~~~~~g~~l~~~~~g------~~~~~~vl~~HG~~~~~~---~~~~~~~~~~~g~~vi~~D~~G~G~s~~~---~ 89 (331)
.+...+...+|.++.+.... ..+.|+||++||+.+... +......++++||.|+++|+||+|.+... .
T Consensus 417 ~~~~~~~~~dg~~i~~~~~~p~~~~~~~~~p~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~g~~~~~~ 496 (695)
T 2bkl_A 417 VEQVFYASKDGTKVPMFVVHRKDLKRDGNAPTLLYGYGGFNVNMEANFRSSILPWLDAGGVYAVANLRGGGEYGKAWHDA 496 (695)
T ss_dssp EEEEEEECTTSCEEEEEEEEETTCCCSSCCCEEEECCCCTTCCCCCCCCGGGHHHHHTTCEEEEECCTTSSTTCHHHHHT
T ss_pred EEEEEEECCCCCEEEEEEEECCCCCCCCCccEEEEECCCCccccCCCcCHHHHHHHhCCCEEEEEecCCCCCcCHHHHHh
Confidence 44556677788888776432 124678999999665432 33344446678999999999998876421 1
Q ss_pred C---CCccchHHHHHHHHHHHHHh--CCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhccccc
Q 020064 90 C---LDQNTTWDLIDDIEKLRQHL--EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAA 164 (331)
Q Consensus 90 ~---~~~~~~~~~~~~~~~~~~~~--~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~ 164 (331)
. .....++++.+.+..+++.- +.++++++|||+||.+++.++.++|++++++|+.++........
T Consensus 497 ~~~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~~---------- 566 (695)
T 2bkl_A 497 GRLDKKQNVFDDFHAAAEYLVQQKYTQPKRLAIYGGSNGGLLVGAAMTQRPELYGAVVCAVPLLDMVRYH---------- 566 (695)
T ss_dssp TSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGG----------
T ss_pred hHhhcCCCcHHHHHHHHHHHHHcCCCCcccEEEEEECHHHHHHHHHHHhCCcceEEEEEcCCccchhhcc----------
Confidence 0 01123344444444444432 34689999999999999999999999999999998865431100
Q ss_pred CChhhHHhhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhh
Q 020064 165 IYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHY 244 (331)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (331)
... ........+ ... ..++.. ..+.
T Consensus 567 -----------~~~--~~~~~~~~~----g~~-----------------------~~~~~~---------~~~~------ 591 (695)
T 2bkl_A 567 -----------LFG--SGRTWIPEY----GTA-----------------------EKPEDF---------KTLH------ 591 (695)
T ss_dssp -----------GST--TGGGGHHHH----CCT-----------------------TSHHHH---------HHHH------
T ss_pred -----------ccC--CCcchHHHh----CCC-----------------------CCHHHH---------HHHH------
Confidence 000 000000000 000 000000 0000
Q ss_pred hhccCCCCCcchhhhhccccc-cccEEEEecCCCCccCCcchHHHHHhCCC-------CcEEEecCCCCCCCc--CCchh
Q 020064 245 FLNKGFFPSDSFLLDNIDNIR-HINATIVQGRYDVCCPMMSAWDLHKAWPE-------ADFKVVADAGHSANE--PGIAA 314 (331)
Q Consensus 245 ~~~~~~~~~~~~~~~~l~~i~-~~P~l~i~G~~D~~~~~~~~~~~~~~~~~-------~~~~~~~~~gH~~~~--~~~~~ 314 (331)
.......+.+++ .+|+|+++|++|..+|+..++++.+.++. +++++++++||.+.. ++ ..
T Consensus 592 ---------~~sp~~~~~~~~~~~P~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~-~~ 661 (695)
T 2bkl_A 592 ---------AYSPYHHVRPDVRYPALLMMAADHDDRVDPMHARKFVAAVQNSPGNPATALLRIEANAGHGGADQVAK-AI 661 (695)
T ss_dssp ---------HHCGGGCCCSSCCCCEEEEEEETTCSSSCTHHHHHHHHHHHTSTTCCSCEEEEEETTCBTTBCSCHHH-HH
T ss_pred ---------hcChHhhhhhcCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhhccCCCCEEEEEeCCCCcCCCCCHHH-HH
Confidence 001112333431 16999999999999999999988887643 688899999999843 33 67
Q ss_pred HHHHHHHHHHHhhhc
Q 020064 315 ELVATNEKLKNLIKN 329 (331)
Q Consensus 315 ~~~~~i~~fl~~~~~ 329 (331)
+..+.+.+||.+..+
T Consensus 662 ~~~~~~~~fl~~~l~ 676 (695)
T 2bkl_A 662 ESSVDLYSFLFQVLD 676 (695)
T ss_dssp HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcC
Confidence 788889999987653
|
| >3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A* 3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A | Back alignment and structure |
|---|
Probab=99.88 E-value=6.4e-22 Score=159.33 Aligned_cols=121 Identities=18% Similarity=0.118 Sum_probs=83.5
Q ss_pred cceeEeCCCceEE-EEeCCCCCCCcEEEeccCCCCC----CCCCcccccCC-CCcEEEEecCCCCCCCCCCCCCCccchH
Q 020064 24 TGILKVSDIHTIY-WEQSGNPTGHPVVFLHGGPGGG----TTPSNRRFFDP-DFYRIILFDQRGAGKSTPHACLDQNTTW 97 (331)
Q Consensus 24 ~~~~~~~~g~~l~-~~~~g~~~~~~vl~~HG~~~~~----~~~~~~~~~~~-~g~~vi~~D~~G~G~s~~~~~~~~~~~~ 97 (331)
...++.. +..++ |...+....|+||++||++... .+......++. .||.|+++|+|+.+.... ...++
T Consensus 59 ~~~~~~~-~i~~~~~~p~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~~-----~~~~~ 132 (322)
T 3fak_A 59 VEQVTVA-GCAAEWVRAPGCQAGKAILYLHGGGYVMGSINTHRSMVGEISRASQAAALLLDYRLAPEHPF-----PAAVE 132 (322)
T ss_dssp EEEEEET-TEEEEEEECTTCCTTCEEEEECCSTTTSCCHHHHHHHHHHHHHHHTSEEEEECCCCTTTSCT-----THHHH
T ss_pred EEEEeeC-CeEEEEEeCCCCCCccEEEEEcCCccccCChHHHHHHHHHHHHhcCCEEEEEeCCCCCCCCC-----CcHHH
Confidence 3444443 33444 3333434578899999965321 12334444544 599999999998765542 23566
Q ss_pred HHHHHHHHHHHH-hCCCcEEEEEeChhHHHHHHHHHhCCCc----eeeEEEeccccch
Q 020064 98 DLIDDIEKLRQH-LEIPEWQVFGGSWGSTLALAYSLAHPDK----VTGLVLRGIFLLR 150 (331)
Q Consensus 98 ~~~~~~~~~~~~-~~~~~v~lvG~S~Gg~~a~~~a~~~p~~----v~~li~~~~~~~~ 150 (331)
+..+.+..+.+. ++.++++|+|||+||.+++.++.+.+++ ++++|+++|....
T Consensus 133 D~~~a~~~l~~~~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~ 190 (322)
T 3fak_A 133 DGVAAYRWLLDQGFKPQHLSISGDSAGGGLVLAVLVSARDQGLPMPASAIPISPWADM 190 (322)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCT
T ss_pred HHHHHHHHHHHcCCCCceEEEEEcCcCHHHHHHHHHHHHhcCCCCceEEEEECCEecC
Confidence 777777777776 5556999999999999999999887664 9999999987653
|
| >1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A* 1tcc_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=7.4e-22 Score=157.38 Aligned_cols=101 Identities=16% Similarity=0.014 Sum_probs=82.6
Q ss_pred CCCcEEEeccCCCCCC--CC-CcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCcEEEEEe
Q 020064 44 TGHPVVFLHGGPGGGT--TP-SNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGG 120 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~--~~-~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG~ 120 (331)
++++|||+||++++.. |. .+...+.+.||+|+++|+||||.++. ..+.+++++.+..+++..+.++++|+||
T Consensus 30 ~~~~VvllHG~~~~~~~~~~~~l~~~L~~~G~~v~~~d~~g~g~~~~-----~~~~~~l~~~i~~~~~~~g~~~v~lVGh 104 (317)
T 1tca_A 30 VSKPILLVPGTGTTGPQSFDSNWIPLSTQLGYTPCWISPPPFMLNDT-----QVNTEYMVNAITALYAGSGNNKLPVLTW 104 (317)
T ss_dssp CSSEEEEECCTTCCHHHHHTTTHHHHHHTTTCEEEEECCTTTTCSCH-----HHHHHHHHHHHHHHHHHTTSCCEEEEEE
T ss_pred CCCeEEEECCCCCCcchhhHHHHHHHHHhCCCEEEEECCCCCCCCcH-----HHHHHHHHHHHHHHHHHhCCCCEEEEEE
Confidence 5678999999877643 44 56666767899999999999997642 2345677788888888888899999999
Q ss_pred ChhHHHHHHHHHhCC---CceeeEEEeccccc
Q 020064 121 SWGSTLALAYSLAHP---DKVTGLVLRGIFLL 149 (331)
Q Consensus 121 S~Gg~~a~~~a~~~p---~~v~~li~~~~~~~ 149 (331)
||||.++..++..+| ++|+++|+++++..
T Consensus 105 S~GG~va~~~~~~~~~~~~~v~~lV~l~~~~~ 136 (317)
T 1tca_A 105 SQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYK 136 (317)
T ss_dssp THHHHHHHHHHHHCGGGTTTEEEEEEESCCTT
T ss_pred ChhhHHHHHHHHHcCccchhhhEEEEECCCCC
Confidence 999999999988875 78999999998643
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=99.87 E-value=3e-21 Score=172.19 Aligned_cols=235 Identities=13% Similarity=0.034 Sum_probs=146.4
Q ss_pred ccceeEeCCCceEEEEeC---C---CCCCCcEEEeccCCCCCC---CCCcccccCCCCcEEEEecCCCCCCCCCC----C
Q 020064 23 STGILKVSDIHTIYWEQS---G---NPTGHPVVFLHGGPGGGT---TPSNRRFFDPDFYRIILFDQRGAGKSTPH----A 89 (331)
Q Consensus 23 ~~~~~~~~~g~~l~~~~~---g---~~~~~~vl~~HG~~~~~~---~~~~~~~~~~~g~~vi~~D~~G~G~s~~~----~ 89 (331)
+...+...||.++.+... + ..+.|+||++||+++... +......++++||.|+++|+||+|.+... .
T Consensus 481 ~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~HGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~G~~~~~~~ 560 (751)
T 2xe4_A 481 ERRFATAPDQTKIPLSVVYHKDLDMSQPQPCMLYGYGSYGLSMDPQFSIQHLPYCDRGMIFAIAHIRGGSELGRAWYEIG 560 (751)
T ss_dssp EEEEEECTTCCEEEEEEEEETTSCTTSCCCEEEECCCCTTCCCCCCCCGGGHHHHTTTCEEEEECCTTSCTTCTHHHHTT
T ss_pred EEEEEECCCCcEEEEEEEcCCCCCCCCCccEEEEECCCCCcCCCCcchHHHHHHHhCCcEEEEEeeCCCCCcCcchhhcc
Confidence 445566778877764332 2 124578999999766533 33345567789999999999999976421 1
Q ss_pred ---CCCccchHHHHHHHHHHHHH--hCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhccccc
Q 020064 90 ---CLDQNTTWDLIDDIEKLRQH--LEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAA 164 (331)
Q Consensus 90 ---~~~~~~~~~~~~~~~~~~~~--~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~ 164 (331)
.....+++++++.+..+++. .+.+++.++|+|+||.+++.++.++|++++++|+.++........ ..
T Consensus 561 ~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~a~~~p~~~~a~v~~~~~~d~~~~~---~~----- 632 (751)
T 2xe4_A 561 AKYLTKRNTFSDFIAAAEFLVNAKLTTPSQLACEGRSAGGLLMGAVLNMRPDLFKVALAGVPFVDVMTTM---CD----- 632 (751)
T ss_dssp SSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCHHHHH---TC-----
T ss_pred ccccccCccHHHHHHHHHHHHHCCCCCcccEEEEEECHHHHHHHHHHHhCchheeEEEEeCCcchHHhhh---cc-----
Confidence 11124567777777777765 345689999999999999999999999999999998865421100 00
Q ss_pred CChhhHHhhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhh
Q 020064 165 IYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHY 244 (331)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (331)
...+. ....+ ..+... ..++. + ..+.
T Consensus 633 ----------~~~~~-----~~~~~-~~~g~p-----------------------~~~~~--------~-~~~~------ 658 (751)
T 2xe4_A 633 ----------PSIPL-----TTGEW-EEWGNP-----------------------NEYKY--------Y-DYML------ 658 (751)
T ss_dssp ----------TTSTT-----HHHHT-TTTCCT-----------------------TSHHH--------H-HHHH------
T ss_pred ----------cCccc-----chhhH-HHcCCC-----------------------CCHHH--------H-HHHH------
Confidence 00000 00000 000000 00000 0 0000
Q ss_pred hhccCCCCCcchhhhhcccccccc-EEEEecCCCCccCCcchHHHHHhCCC----Cc---EEEecCCCCCCCcCC-chhH
Q 020064 245 FLNKGFFPSDSFLLDNIDNIRHIN-ATIVQGRYDVCCPMMSAWDLHKAWPE----AD---FKVVADAGHSANEPG-IAAE 315 (331)
Q Consensus 245 ~~~~~~~~~~~~~~~~l~~i~~~P-~l~i~G~~D~~~~~~~~~~~~~~~~~----~~---~~~~~~~gH~~~~~~-~~~~ 315 (331)
.......+.++ ++| +|+++|++|..+|+..+.++.+.++. .+ +.+++++||.+..+. ...+
T Consensus 659 ---------~~sp~~~~~~~-~~Pp~Lii~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~ 728 (751)
T 2xe4_A 659 ---------SYSPMDNVRAQ-EYPNIMVQCGLHDPRVAYWEPAKWVSKLRECKTDNNEILLNIDMESGHFSAKDRYKFWK 728 (751)
T ss_dssp ---------HHCTGGGCCSS-CCCEEEEEEETTCSSSCTHHHHHHHHHHHHHCCSCCCEEEEEETTCCSSCCSSHHHHHH
T ss_pred ---------hcChhhhhccC-CCCceeEEeeCCCCCCCHHHHHHHHHHHHhcCCCCceEEEEECCCCCCCCcCChhHHHH
Confidence 11122345567 587 99999999999999998888877632 23 344599999987543 1334
Q ss_pred HHHHHHHHHHhhhc
Q 020064 316 LVATNEKLKNLIKN 329 (331)
Q Consensus 316 ~~~~i~~fl~~~~~ 329 (331)
....+.+||.+..+
T Consensus 729 ~~~~~~~Fl~~~l~ 742 (751)
T 2xe4_A 729 ESAIQQAFVCKHLK 742 (751)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhC
Confidence 55678889987653
|
| >3ds8_A LIN2722 protein; unkonwn function, structural genomics, PSI, MCSG, P structure initiative; 1.80A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.87 E-value=7.4e-22 Score=153.29 Aligned_cols=203 Identities=14% Similarity=0.116 Sum_probs=126.0
Q ss_pred CCCcEEEeccCCCCCCC-CCcccccCCCCc---EEEEecCCCCC------C----CCCCC-----CCCccchHHHHHHH-
Q 020064 44 TGHPVVFLHGGPGGGTT-PSNRRFFDPDFY---RIILFDQRGAG------K----STPHA-----CLDQNTTWDLIDDI- 103 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~~-~~~~~~~~~~g~---~vi~~D~~G~G------~----s~~~~-----~~~~~~~~~~~~~~- 103 (331)
+++||||+||++++... ..++..+.+.++ .+++++..+.| . +..+. .....+++++++++
T Consensus 2 ~~~pvvllHG~~~~~~~~~~l~~~L~~~~~~~~~~~~~~v~~~G~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~a~~l~ 81 (254)
T 3ds8_A 2 DQIPIILIHGSGGNASSLDKMADQLMNEYRSSNEALTMTVNSEGKIKFEGKLTKDAKRPIIKFGFEQNQATPDDWSKWLK 81 (254)
T ss_dssp CCCCEEEECCTTCCTTTTHHHHHHHHHTTCCCCCEEEEEEETTTEEEEESCCCTTCSSCEEEEEESSTTSCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCcchHHHHHHHHHHhcCCCceEEEEEEcCCCeEEEEEEeccCCCCCEEEEEecCCCCCHHHHHHHHH
Confidence 57889999997776554 444555544332 33333333322 1 21110 01235788888888
Q ss_pred ---HHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCC-----ceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhc
Q 020064 104 ---EKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPD-----KVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRD 175 (331)
Q Consensus 104 ---~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~-----~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (331)
..+.+.++.++++++||||||.+++.++.++|+ +++++|+++++........ ...
T Consensus 82 ~~i~~l~~~~~~~~~~lvGHS~Gg~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~----------------~~~- 144 (254)
T 3ds8_A 82 IAMEDLKSRYGFTQMDGVGHSNGGLALTYYAEDYAGDKTVPTLRKLVAIGSPFNDLDPND----------------NGM- 144 (254)
T ss_dssp HHHHHHHHHHCCSEEEEEEETHHHHHHHHHHHHSTTCTTSCEEEEEEEESCCTTCSCHHH----------------HCS-
T ss_pred HHHHHHHHHhCCCceEEEEECccHHHHHHHHHHccCCccccceeeEEEEcCCcCcccccc----------------ccc-
Confidence 555566788899999999999999999999998 8999999998654321000 000
Q ss_pred cCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcc
Q 020064 176 LIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDS 255 (331)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (331)
.+. ....... ...+. . ..
T Consensus 145 ~~~-----------~~~~p~~---------------------------------~~~~~-~-----------------~~ 162 (254)
T 3ds8_A 145 DLS-----------FKKLPNS---------------------------------TPQMD-Y-----------------FI 162 (254)
T ss_dssp CTT-----------CSSCSSC---------------------------------CHHHH-H-----------------HH
T ss_pred ccc-----------cccCCcc---------------------------------hHHHH-H-----------------HH
Confidence 000 0000000 00000 0 00
Q ss_pred hhhhhccccccccEEEEecC------CCCccCCcchHHHHHhCCC----CcEEEecC--CCCCCCcCCchhHHHHHHHHH
Q 020064 256 FLLDNIDNIRHINATIVQGR------YDVCCPMMSAWDLHKAWPE----ADFKVVAD--AGHSANEPGIAAELVATNEKL 323 (331)
Q Consensus 256 ~~~~~l~~i~~~P~l~i~G~------~D~~~~~~~~~~~~~~~~~----~~~~~~~~--~gH~~~~~~~~~~~~~~i~~f 323 (331)
.....+.. ++|++.|+|+ .|.+||.+.++.+...+++ .+.+++.+ ++|..+.++ + ++.+.|..|
T Consensus 163 ~~~~~~~~--~~~vl~I~G~~~~~~~~Dg~Vp~~ss~~l~~~~~~~~~~~~~~~~~g~~a~Hs~l~~~-~-~v~~~i~~f 238 (254)
T 3ds8_A 163 KNQTEVSP--DLEVLAIAGELSEDNPTDGIVPTISSLATRLFMPGSAKAYIEDIQVGEDAVHQTLHET-P-KSIEKTYWF 238 (254)
T ss_dssp HTGGGSCT--TCEEEEEEEESBTTBCBCSSSBHHHHTGGGGTSBTTBSEEEEEEEESGGGCGGGGGGS-H-HHHHHHHHH
T ss_pred HHHhhCCC--CcEEEEEEecCCCCCCCCcEeeHHHHHHHHHHhhccCcceEEEEEeCCCCchhcccCC-H-HHHHHHHHH
Confidence 01112222 4999999999 9999999999988887764 23445555 779988885 6 599999999
Q ss_pred HHhhhc
Q 020064 324 KNLIKN 329 (331)
Q Consensus 324 l~~~~~ 329 (331)
|++...
T Consensus 239 L~~~~~ 244 (254)
T 3ds8_A 239 LEKFKT 244 (254)
T ss_dssp HHTCCC
T ss_pred HHHhcC
Confidence 998754
|
| >3lp5_A Putative cell surface hydrolase; structural genom PSI2, MCSG, protein structure initiative, midwest center FO structural genomics; 2.00A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.87 E-value=8.1e-23 Score=156.42 Aligned_cols=192 Identities=11% Similarity=0.049 Sum_probs=131.2
Q ss_pred CCCcEEEeccCCCCCC-CCCcccccCCCC---cEEEEecCCCCCCCC--CC-----CC----------CCcc-chHHHHH
Q 020064 44 TGHPVVFLHGGPGGGT-TPSNRRFFDPDF---YRIILFDQRGAGKST--PH-----AC----------LDQN-TTWDLID 101 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~-~~~~~~~~~~~g---~~vi~~D~~G~G~s~--~~-----~~----------~~~~-~~~~~~~ 101 (331)
.++||||+||++++.. |..++..+.+.+ ++|+.+|.+++|.+. .. .. ...+ ++++.++
T Consensus 3 ~~~pvv~iHG~~~~~~~~~~~~~~L~~~~~~~~~vi~~~v~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~~~~a~ 82 (250)
T 3lp5_A 3 RMAPVIMVPGSSASQNRFDSLITELGKETPKKHSVLKLTVQTDGTIKYSGSIAANDNEPFIVIGFANNRDGKANIDKQAV 82 (250)
T ss_dssp SCCCEEEECCCGGGHHHHHHHHHHHHHHSSSCCCEEEEEECTTSCEEEEECCCTTCSSCEEEEEESCCCCSHHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHHHhcCCCCceEEEEEEecCCeEEEeeecCCCCcCCeEEEEeccCCCcccCHHHHHH
Confidence 5678999999877644 455566665555 789998888887631 10 00 0112 6778888
Q ss_pred HHHHHHHHh----CCCcEEEEEeChhHHHHHHHHHhC-----CCceeeEEEeccccchhhhhhhHhhcccccCChhhHHh
Q 020064 102 DIEKLRQHL----EIPEWQVFGGSWGSTLALAYSLAH-----PDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWES 172 (331)
Q Consensus 102 ~~~~~~~~~----~~~~v~lvG~S~Gg~~a~~~a~~~-----p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (331)
++..+++.+ +.++++++||||||.+++.++..+ |++|+++|+++++......
T Consensus 83 ~l~~~~~~l~~~~~~~~~~lvGHSmGg~~a~~~~~~~~~~~~~~~v~~lv~l~~p~~g~~~------------------- 143 (250)
T 3lp5_A 83 WLNTAFKALVKTYHFNHFYALGHSNGGLIWTLFLERYLKESPKVHIDRLMTIASPYNMEST------------------- 143 (250)
T ss_dssp HHHHHHHHHHTTSCCSEEEEEEETHHHHHHHHHHHHTGGGSTTCEEEEEEEESCCTTTTCC-------------------
T ss_pred HHHHHHHHHHHHcCCCCeEEEEECHhHHHHHHHHHHccccccchhhCEEEEECCCCCcccc-------------------
Confidence 888888877 888999999999999999999987 6789999999986542100
Q ss_pred hhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCC
Q 020064 173 FRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFP 252 (331)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (331)
.. ...... +..
T Consensus 144 -----~~--------------~~~~~~---------------------------------~~~----------------- 154 (250)
T 3lp5_A 144 -----ST--------------TAKTSM---------------------------------FKE----------------- 154 (250)
T ss_dssp -----CS--------------SCCCHH---------------------------------HHH-----------------
T ss_pred -----cc--------------cccCHH---------------------------------HHH-----------------
Confidence 00 000000 000
Q ss_pred CcchhhhhccccccccEEEEecC----CCCccCCcchHHHHHhCCC--CcE--EEe--cCCCCCCCcCCchhHHHHHHHH
Q 020064 253 SDSFLLDNIDNIRHINATIVQGR----YDVCCPMMSAWDLHKAWPE--ADF--KVV--ADAGHSANEPGIAAELVATNEK 322 (331)
Q Consensus 253 ~~~~~~~~l~~i~~~P~l~i~G~----~D~~~~~~~~~~~~~~~~~--~~~--~~~--~~~gH~~~~~~~~~~~~~~i~~ 322 (331)
..+....+.+ ++|+++|+|+ .|.++|.+.++.+...+++ ..+ +.+ ++++|..+.+. + ++.+.|.+
T Consensus 155 -l~~~~~~lp~--~vpvl~I~G~~~~~~Dg~Vp~~sa~~l~~l~~~~~~~~~~~~v~g~~a~H~~l~e~-~-~v~~~I~~ 229 (250)
T 3lp5_A 155 -LYRYRTGLPE--SLTVYSIAGTENYTSDGTVPYNSVNYGKYIFQDQVKHFTEITVTGANTAHSDLPQN-K-QIVSLIRQ 229 (250)
T ss_dssp -HHHTGGGSCT--TCEEEEEECCCCCCTTTBCCHHHHTTHHHHHTTTSSEEEEEECTTTTBSSCCHHHH-H-HHHHHHHH
T ss_pred -HHhccccCCC--CceEEEEEecCCCCCCceeeHHHHHHHHHHhcccccceEEEEEeCCCCchhcchhC-H-HHHHHHHH
Confidence 0001112222 5999999999 9999999888887777754 222 333 35779998885 6 89999999
Q ss_pred HHHhhh
Q 020064 323 LKNLIK 328 (331)
Q Consensus 323 fl~~~~ 328 (331)
||....
T Consensus 230 FL~~~~ 235 (250)
T 3lp5_A 230 YLLAET 235 (250)
T ss_dssp HTSCCC
T ss_pred HHhccc
Confidence 997654
|
| >1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region; esterase, lipase, serine hydrolase, structural genomics; HET: LI5; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.87 E-value=3.2e-22 Score=154.87 Aligned_cols=192 Identities=12% Similarity=0.078 Sum_probs=124.0
Q ss_pred CCCcEEEeccCCCCCCCC-----CcccccCCCCcEEEEecCC---------------------CCCCCCCC----CCCCc
Q 020064 44 TGHPVVFLHGGPGGGTTP-----SNRRFFDPDFYRIILFDQR---------------------GAGKSTPH----ACLDQ 93 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~~~-----~~~~~~~~~g~~vi~~D~~---------------------G~G~s~~~----~~~~~ 93 (331)
..|+|||+||++++...+ .+...+.+.||+|+++|+| |+|.+... .....
T Consensus 4 ~~~~vl~lHG~g~~~~~~~~~~~~l~~~l~~~g~~v~~~d~p~~~~~~~~~~~~~~~~~~~~~g~g~~~~w~~~~~~~~~ 83 (243)
T 1ycd_A 4 QIPKLLFLHGFLQNGKVFSEKSSGIRKLLKKANVQCDYIDAPVLLEKKDLPFEMDDEKWQATLDADVNRAWFYHSEISHE 83 (243)
T ss_dssp CCCEEEEECCTTCCHHHHHHHTHHHHHHHHHTTCEEEEECCSEECCGGGCSSCCCHHHHHHHHHTTCCEESSCCCSSGGG
T ss_pred cCceEEEeCCCCccHHHHHHHHHHHHHHHhhcceEEEEcCCCeeCCCcCcccccccccccccCCCCCCcccccCCCCcch
Confidence 467899999988775533 2334444459999999999 44544211 00012
Q ss_pred cchHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCC------CceeeEEEeccccchhhhhhhHhhcccccCCh
Q 020064 94 NTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHP------DKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYP 167 (331)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p------~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (331)
.++.+.++.+...++..+ ++++|+||||||.+++.+|.+++ ..++.++++++.......
T Consensus 84 ~d~~~~~~~l~~~~~~~~-~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~v~~~g~~~~~~~-------------- 148 (243)
T 1ycd_A 84 LDISEGLKSVVDHIKANG-PYDGIVGLSQGAALSSIITNKISELVPDHPQFKVSVVISGYSFTEPD-------------- 148 (243)
T ss_dssp CCCHHHHHHHHHHHHHHC-CCSEEEEETHHHHHHHHHHHHHHHHSTTCCCCSEEEEESCCCCEEEC--------------
T ss_pred hhHHHHHHHHHHHHHhcC-CeeEEEEeChHHHHHHHHHHHHhhcccCCCCceEEEEecCCCCCCcc--------------
Confidence 456677777777766555 67999999999999999998753 245666666653321000
Q ss_pred hhHHhhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhc
Q 020064 168 DAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLN 247 (331)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (331)
. ..... . .+ ...
T Consensus 149 -~------~~~~~---------~-~~---------------------------~~~------------------------ 160 (243)
T 1ycd_A 149 -P------EHPGE---------L-RI---------------------------TEK------------------------ 160 (243)
T ss_dssp -T------TSTTC---------E-EE---------------------------CGG------------------------
T ss_pred -c------ccccc---------c-cc---------------------------chh------------------------
Confidence 0 00000 0 00 000
Q ss_pred cCCCCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCCC-------CcEEEecCCCCCCCcCCchhHHHHHH
Q 020064 248 KGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPE-------ADFKVVADAGHSANEPGIAAELVATN 320 (331)
Q Consensus 248 ~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~-------~~~~~~~~~gH~~~~~~~~~~~~~~i 320 (331)
..+....+.++ ++|+|+++|++|.++|++.++.+.+.+++ ...++++++||.+..+ +.+.+.|
T Consensus 161 ------~~~~~~~~~~~-~~P~l~i~G~~D~~vp~~~~~~~~~~~~~~~g~~~~~~~~~~~~~gH~~~~~---~~~~~~i 230 (243)
T 1ycd_A 161 ------FRDSFAVKPDM-KTKMIFIYGASDQAVPSVRSKYLYDIYLKAQNGNKEKVLAYEHPGGHMVPNK---KDIIRPI 230 (243)
T ss_dssp ------GTTTTCCCTTC-CCEEEEEEETTCSSSCHHHHHHHHHHHHHHTTTCTTTEEEEEESSSSSCCCC---HHHHHHH
T ss_pred ------HHHhccCcccC-CCCEEEEEeCCCCccCHHHHHHHHHHhhhhccccccccEEEecCCCCcCCch---HHHHHHH
Confidence 00001124557 59999999999999999989888887754 3566778899987654 3589999
Q ss_pred HHHHHhhh
Q 020064 321 EKLKNLIK 328 (331)
Q Consensus 321 ~~fl~~~~ 328 (331)
.+|+++..
T Consensus 231 ~~fl~~~~ 238 (243)
T 1ycd_A 231 VEQITSSL 238 (243)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhh
Confidence 99998764
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=4.2e-21 Score=170.26 Aligned_cols=234 Identities=15% Similarity=0.086 Sum_probs=140.9
Q ss_pred CccceeEeCCCceEEEEeC---C---CCCCCcEEEeccCCCCCCC---CCcccccCCCCcEEEEecCCCCCCCCCC----
Q 020064 22 YSTGILKVSDIHTIYWEQS---G---NPTGHPVVFLHGGPGGGTT---PSNRRFFDPDFYRIILFDQRGAGKSTPH---- 88 (331)
Q Consensus 22 ~~~~~~~~~~g~~l~~~~~---g---~~~~~~vl~~HG~~~~~~~---~~~~~~~~~~g~~vi~~D~~G~G~s~~~---- 88 (331)
.+...+...+|.++.+... + ..+.|+||++||+.+.... ......++++||.|+++|+||.|.....
T Consensus 425 ~~~~~~~~~dg~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~ 504 (693)
T 3iuj_A 425 SEQRFYQSKDGTRVPLIISYRKGLKLDGSNPTILYGYGGFDVSLTPSFSVSVANWLDLGGVYAVANLRGGGEYGQAWHLA 504 (693)
T ss_dssp EEEEEEECTTSCEEEEEEEEESSCCCSSCCCEEEECCCCTTCCCCCCCCHHHHHHHHTTCEEEEECCTTSSTTCHHHHHT
T ss_pred eEEEEEecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCcCCCCccCHHHHHHHHCCCEEEEEeCCCCCccCHHHHHh
Confidence 3445566778877765533 2 1246889999997654332 2234466679999999999998876421
Q ss_pred --CCCCccchHHHHHHHHHHHHH--hCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhccccc
Q 020064 89 --ACLDQNTTWDLIDDIEKLRQH--LEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAA 164 (331)
Q Consensus 89 --~~~~~~~~~~~~~~~~~~~~~--~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~ 164 (331)
.......++++.+.+..+++. .+.+++.++|||+||++++.++.++|++++++|+..+.........
T Consensus 505 ~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~~~~~p~~~~a~v~~~~~~d~~~~~~--------- 575 (693)
T 3iuj_A 505 GTQQNKQNVFDDFIAAAEYLKAEGYTRTDRLAIRGGSNGGLLVGAVMTQRPDLMRVALPAVGVLDMLRYHT--------- 575 (693)
T ss_dssp TSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCCTTTGGG---------
T ss_pred hhhhcCCCcHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHhhCccceeEEEecCCcchhhhhcc---------
Confidence 011122455666666666655 2346899999999999999999999999999999988654211000
Q ss_pred CChhhHHhhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhh
Q 020064 165 IYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHY 244 (331)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (331)
.. ........+ ... ..++. ....+.
T Consensus 576 ------------~~--~~~~~~~~~----g~p-----------------------~~~~~--------~~~~~~------ 600 (693)
T 3iuj_A 576 ------------FT--AGTGWAYDY----GTS-----------------------ADSEA--------MFDYLK------ 600 (693)
T ss_dssp ------------SG--GGGGCHHHH----CCT-----------------------TSCHH--------HHHHHH------
T ss_pred ------------CC--CchhHHHHc----CCc-----------------------cCHHH--------HHHHHH------
Confidence 00 000000000 000 00000 000000
Q ss_pred hhccCCCCCcchhhhhccc-ccccc-EEEEecCCCCccCCcchHHHHHhCC-------CCcEEEecCCCCCCCcC-Cchh
Q 020064 245 FLNKGFFPSDSFLLDNIDN-IRHIN-ATIVQGRYDVCCPMMSAWDLHKAWP-------EADFKVVADAGHSANEP-GIAA 314 (331)
Q Consensus 245 ~~~~~~~~~~~~~~~~l~~-i~~~P-~l~i~G~~D~~~~~~~~~~~~~~~~-------~~~~~~~~~~gH~~~~~-~~~~ 314 (331)
.......+.+ + ++| +|+++|++|..+|+..+.++.+.++ .+++++++++||.+... ....
T Consensus 601 ---------~~sp~~~~~~~~-~~Pp~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~ 670 (693)
T 3iuj_A 601 ---------GYSPLHNVRPGV-SYPSTMVTTADHDDRVVPAHSFKFAATLQADNAGPHPQLIRIETNAGHGAGTPVAKLI 670 (693)
T ss_dssp ---------HHCHHHHCCTTC-CCCEEEEEEESSCSSSCTHHHHHHHHHHHHHCCSSSCEEEEEEC-------CHHHHHH
T ss_pred ---------hcCHHHhhcccC-CCCceeEEecCCCCCCChhHHHHHHHHHHhhCCCCCCEEEEEeCCCCCCCcccHHHHH
Confidence 1112234555 6 587 9999999999999998888887763 34788899999998652 2367
Q ss_pred HHHHHHHHHHHhhhc
Q 020064 315 ELVATNEKLKNLIKN 329 (331)
Q Consensus 315 ~~~~~i~~fl~~~~~ 329 (331)
+..+.+.+||.+..+
T Consensus 671 ~~~~~~~~fl~~~l~ 685 (693)
T 3iuj_A 671 EQSADIYAFTLYEMG 685 (693)
T ss_dssp HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcC
Confidence 788889999987653
|
| >3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine structural genomics, center for structural genomics of INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.86 E-value=8.6e-21 Score=153.27 Aligned_cols=234 Identities=15% Similarity=0.128 Sum_probs=136.0
Q ss_pred ccceeEeCCCceEEEEeCCC--CCCCcEEEeccCC---CCCC-CCCcccccCC-CCcEEEEecCCCCCCCCCCCCCCccc
Q 020064 23 STGILKVSDIHTIYWEQSGN--PTGHPVVFLHGGP---GGGT-TPSNRRFFDP-DFYRIILFDQRGAGKSTPHACLDQNT 95 (331)
Q Consensus 23 ~~~~~~~~~g~~l~~~~~g~--~~~~~vl~~HG~~---~~~~-~~~~~~~~~~-~g~~vi~~D~~G~G~s~~~~~~~~~~ 95 (331)
+...+...+| .+..+.+-+ .++|+||++||++ ++.. +......+.. .||.|+++|+|+.+....+ ..
T Consensus 64 ~~~~~~~~~g-~i~~~~~~p~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~V~~~dyr~~p~~~~~-----~~ 137 (326)
T 3ga7_A 64 RTCAVPTPYG-DVTTRLYSPQPTSQATLYYLHGGGFILGNLDTHDRIMRLLARYTGCTVIGIDYSLSPQARYP-----QA 137 (326)
T ss_dssp EEEEECCTTS-CEEEEEEESSSSCSCEEEEECCSTTTSCCTTTTHHHHHHHHHHHCSEEEEECCCCTTTSCTT-----HH
T ss_pred EEEEeecCCC-CeEEEEEeCCCCCCcEEEEECCCCcccCChhhhHHHHHHHHHHcCCEEEEeeCCCCCCCCCC-----cH
Confidence 4556666777 665544322 2458899999976 4433 3344555555 6999999999987655422 23
Q ss_pred hHHHHHHHHHHHHHh---C--CCcEEEEEeChhHHHHHHHHHhCCCc------eeeEEEeccccchhhhhhhHhhccccc
Q 020064 96 TWDLIDDIEKLRQHL---E--IPEWQVFGGSWGSTLALAYSLAHPDK------VTGLVLRGIFLLRKKEIDWFYEGGAAA 164 (331)
Q Consensus 96 ~~~~~~~~~~~~~~~---~--~~~v~lvG~S~Gg~~a~~~a~~~p~~------v~~li~~~~~~~~~~~~~~~~~~~~~~ 164 (331)
.++..+.+..+.+.. + .++++|+|+|+||.+++.++.+++++ +++++++.+..........
T Consensus 138 ~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~vl~~~~~~~~~~~~~-------- 209 (326)
T 3ga7_A 138 IEETVAVCSYFSQHADEYSLNVEKIGFAGDSAGAMLALASALWLRDKHIRCGNVIAILLWYGLYGLQDSVSR-------- 209 (326)
T ss_dssp HHHHHHHHHHHHHTTTTTTCCCSEEEEEEETHHHHHHHHHHHHHHHHTCCSSEEEEEEEESCCCSCSCCHHH--------
T ss_pred HHHHHHHHHHHHHhHHHhCCChhheEEEEeCHHHHHHHHHHHHHHhcCCCccCceEEEEeccccccCCChhH--------
Confidence 455555555555432 3 46899999999999999999988764 8999998875432111000
Q ss_pred CChhhHHhhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhh
Q 020064 165 IYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHY 244 (331)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (331)
.. +..................+. ........
T Consensus 210 ------~~----------------~~~~~~~l~~~~~~~~~~~~~----------~~~~~~~~----------------- 240 (326)
T 3ga7_A 210 ------RL----------------FGGAWDGLTREDLDMYEKAYL----------RNDEDRES----------------- 240 (326)
T ss_dssp ------HH----------------CCCTTTTCCHHHHHHHHHHHC----------SSGGGGGC-----------------
T ss_pred ------hh----------------hcCCCCCCCHHHHHHHHHHhC----------CCCCccCC-----------------
Confidence 00 000000000000000000000 00000000
Q ss_pred hhccCCCCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhC----CCCcEEEecCCCCCCCcCC----chhHH
Q 020064 245 FLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAW----PEADFKVVADAGHSANEPG----IAAEL 316 (331)
Q Consensus 245 ~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~~~----~~~~~ 316 (331)
.. .......+.+. ..|+|+++|++|.+++ .+..+.+.+ ..++++++++++|.+.... ..+++
T Consensus 241 -----~~--~~~~~~~~~~~-~~P~li~~G~~D~~~~--~~~~~~~~l~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~ 310 (326)
T 3ga7_A 241 -----PW--YCLFNNDLTRD-VPPCFIASAEFDPLID--DSRLLHQTLQAHQQPCEYKMYPGTLHAFLHYSRMMTIADDA 310 (326)
T ss_dssp -----TT--TSGGGSCCSSC-CCCEEEEEETTCTTHH--HHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHH
T ss_pred -----cc--cCCCcchhhcC-CCCEEEEecCcCcCHH--HHHHHHHHHHHCCCcEEEEEeCCCccchhhhcCccHHHHHH
Confidence 00 01112234444 3799999999999985 455555544 3569999999999884321 26889
Q ss_pred HHHHHHHHHhhhc
Q 020064 317 VATNEKLKNLIKN 329 (331)
Q Consensus 317 ~~~i~~fl~~~~~ 329 (331)
.+.+.+||++..+
T Consensus 311 ~~~~~~fl~~~l~ 323 (326)
T 3ga7_A 311 LQDGARFFMARMK 323 (326)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc
Confidence 9999999987643
|
| >4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.3e-20 Score=164.71 Aligned_cols=233 Identities=15% Similarity=0.080 Sum_probs=146.0
Q ss_pred CccceeEeCCCceEEEEeC---C---CCCCCcEEEeccCCCCCCCCC---cc-cccCCCCcEEEEecCCCCCCCCCC---
Q 020064 22 YSTGILKVSDIHTIYWEQS---G---NPTGHPVVFLHGGPGGGTTPS---NR-RFFDPDFYRIILFDQRGAGKSTPH--- 88 (331)
Q Consensus 22 ~~~~~~~~~~g~~l~~~~~---g---~~~~~~vl~~HG~~~~~~~~~---~~-~~~~~~g~~vi~~D~~G~G~s~~~--- 88 (331)
.+...++..||.++.+... + ..+.|+||++||+++...... .. ..++++||.|+++|+||+|.+...
T Consensus 449 ~e~v~~~s~DG~~i~~~l~~P~~~~~~~~~P~vl~~HGG~~~~~~~~~~~~~~q~la~~Gy~Vv~~d~RGsg~~G~~~~~ 528 (711)
T 4hvt_A 449 LEQKEATSFDGVKIPYFLVYKKGIKFDGKNPTLLEAYGGFQVINAPYFSRIKNEVWVKNAGVSVLANIRGGGEFGPEWHK 528 (711)
T ss_dssp EEEEEEECTTSCEEEEEEEEETTCCCSSCCCEEEECCCCTTCCCCCCCCHHHHHHTGGGTCEEEEECCTTSSTTCHHHHH
T ss_pred eEEEEEECCCCeEEEEEEEecCCCCCCCCccEEEEECCCCCCCCCCcccHHHHHHHHHCCCEEEEEeCCCCCCcchhHHH
Confidence 3445677789988765533 2 124578999999765433221 22 367789999999999999876421
Q ss_pred ---CCCCccchHHHHHHHHHHHHHh--CCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccc
Q 020064 89 ---ACLDQNTTWDLIDDIEKLRQHL--EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAA 163 (331)
Q Consensus 89 ---~~~~~~~~~~~~~~~~~~~~~~--~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~ 163 (331)
.......++++.+.+..+++.- +.+++.++|+|+||.+++.++.++|++++++|+..+........
T Consensus 529 ~~~~~~~~~~~~D~~aav~~L~~~~~~d~~rI~i~G~S~GG~la~~~a~~~pd~f~a~V~~~pv~D~~~~~--------- 599 (711)
T 4hvt_A 529 SAQGIKRQTAFNDFFAVSEELIKQNITSPEYLGIKGGSNGGLLVSVAMTQRPELFGAVACEVPILDMIRYK--------- 599 (711)
T ss_dssp TTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGG---------
T ss_pred hhhhccCcCcHHHHHHHHHHHHHcCCCCcccEEEEeECHHHHHHHHHHHhCcCceEEEEEeCCccchhhhh---------
Confidence 1111234455555555555542 23689999999999999999999999999999988865431100
Q ss_pred cCChhhHHhhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhh
Q 020064 164 AIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENH 243 (331)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (331)
.. .....+...+ .... .++. ...+.
T Consensus 600 -----------~~---~~~~~~~~~~----G~p~-----------------------~~~~---------~~~l~----- 624 (711)
T 4hvt_A 600 -----------EF---GAGHSWVTEY----GDPE-----------------------IPND---------LLHIK----- 624 (711)
T ss_dssp -----------GS---TTGGGGHHHH----CCTT-----------------------SHHH---------HHHHH-----
T ss_pred -----------cc---ccchHHHHHh----CCCc-----------------------CHHH---------HHHHH-----
Confidence 00 0000000000 0000 0000 00000
Q ss_pred hhhccCCCCCcchhhhhccccccc--cEEEEecCCCCccCCcchHHHHHhC-C----CCcEEEecCCCCCCCcCC-chhH
Q 020064 244 YFLNKGFFPSDSFLLDNIDNIRHI--NATIVQGRYDVCCPMMSAWDLHKAW-P----EADFKVVADAGHSANEPG-IAAE 315 (331)
Q Consensus 244 ~~~~~~~~~~~~~~~~~l~~i~~~--P~l~i~G~~D~~~~~~~~~~~~~~~-~----~~~~~~~~~~gH~~~~~~-~~~~ 315 (331)
.......+.++ ++ |+|+++|++|..||+..+.++.+.+ . .+++++++++||.+.... ....
T Consensus 625 ----------~~SP~~~v~~i-~~~pPvLii~G~~D~~Vp~~~s~~~~~aL~~~~g~pv~l~~~p~~gHg~~~~~~~~~~ 693 (711)
T 4hvt_A 625 ----------KYAPLENLSLT-QKYPTVLITDSVLDQRVHPWHGRIFEYVLAQNPNTKTYFLESKDSGHGSGSDLKESAN 693 (711)
T ss_dssp ----------HHCGGGSCCTT-SCCCEEEEEEETTCCSSCTHHHHHHHHHHTTCTTCCEEEEEESSCCSSSCSSHHHHHH
T ss_pred ----------HcCHHHHHhhc-CCCCCEEEEecCCCCcCChHHHHHHHHHHHHHcCCCEEEEEECCCCCcCcCCcchHHH
Confidence 11122345556 46 9999999999999999998888877 3 468899999999975432 2455
Q ss_pred HHHHHHHHHHhhhc
Q 020064 316 LVATNEKLKNLIKN 329 (331)
Q Consensus 316 ~~~~i~~fl~~~~~ 329 (331)
..+.+.+||.+..+
T Consensus 694 ~~~~i~~FL~~~Lg 707 (711)
T 4hvt_A 694 YFINLYTFFANALK 707 (711)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhC
Confidence 66778899987653
|
| >3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, tuberculosis, O LIPW, heroin esterase; 1.75A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.86 E-value=2.6e-22 Score=161.19 Aligned_cols=234 Identities=18% Similarity=0.114 Sum_probs=139.4
Q ss_pred CCccceeEeCCCceEEEEeCCC--CCCCcEEEeccCC---CC-CCCCCcccccC-CCCcEEEEecCCCCCCCCCCCCCCc
Q 020064 21 PYSTGILKVSDIHTIYWEQSGN--PTGHPVVFLHGGP---GG-GTTPSNRRFFD-PDFYRIILFDQRGAGKSTPHACLDQ 93 (331)
Q Consensus 21 ~~~~~~~~~~~g~~l~~~~~g~--~~~~~vl~~HG~~---~~-~~~~~~~~~~~-~~g~~vi~~D~~G~G~s~~~~~~~~ 93 (331)
..+...+...+|..+.++.+.+ ...|+||++||++ ++ ..+...+..++ +.||.|+++|+|+.+....+
T Consensus 59 ~~~~~~i~~~~G~~i~~~~~~P~~~~~p~vv~~HGgG~~~g~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~~p----- 133 (317)
T 3qh4_A 59 AVADDVVTGEAGRPVPVRIYRAAPTPAPVVVYCHAGGFALGNLDTDHRQCLELARRARCAVVSVDYRLAPEHPYP----- 133 (317)
T ss_dssp EEEEEEEECTTSCEEEEEEEECSCSSEEEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTSCTT-----
T ss_pred eEEEEEecCCCCCeEEEEEEecCCCCCcEEEEECCCcCccCChHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCc-----
Confidence 3455667777886666544432 3467899999965 33 23444555555 35999999999987665422
Q ss_pred cchHHHHHHHHHHHHH---hCC--CcEEEEEeChhHHHHHHHHHhCCC----ceeeEEEeccccchhhhhhhHhhccccc
Q 020064 94 NTTWDLIDDIEKLRQH---LEI--PEWQVFGGSWGSTLALAYSLAHPD----KVTGLVLRGIFLLRKKEIDWFYEGGAAA 164 (331)
Q Consensus 94 ~~~~~~~~~~~~~~~~---~~~--~~v~lvG~S~Gg~~a~~~a~~~p~----~v~~li~~~~~~~~~~~~~~~~~~~~~~ 164 (331)
...++..+.+..+.+. ++. ++++|+|||+||.+++.++..+++ .++++++++|..... ...
T Consensus 134 ~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~~-~~~--------- 203 (317)
T 3qh4_A 134 AALHDAIEVLTWVVGNATRLGFDARRLAVAGSSAGATLAAGLAHGAADGSLPPVIFQLLHQPVLDDR-PTA--------- 203 (317)
T ss_dssp HHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTSSCCCCEEEEESCCCCSS-CCH---------
T ss_pred hHHHHHHHHHHHHHhhHHhhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCeeEEEEECceecCC-CCc---------
Confidence 2344555555444443 454 489999999999999999987655 499999999876432 000
Q ss_pred CChhhHHhhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhh
Q 020064 165 IYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHY 244 (331)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (331)
.... +...... ... .....|.. ........+..
T Consensus 204 ----~~~~----------------~~~~~~~-~~~---~~~~~~~~---~~~~~~~~~~~-------------------- 236 (317)
T 3qh4_A 204 ----SRSE----------------FRATPAF-DGE---AASLMWRH---YLAGQTPSPES-------------------- 236 (317)
T ss_dssp ----HHHH----------------TTTCSSS-CHH---HHHHHHHH---HHTTCCCCTTT--------------------
T ss_pred ----CHHH----------------hcCCCCc-CHH---HHHHHHHH---hcCCCCCCccc--------------------
Confidence 0000 0000000 000 00000000 00000000000
Q ss_pred hhccCCCCCcchhhhhccccccccEEEEecCCCCccC--CcchHHHHHhCCCCcEEEecCCCCCCC-----cCCchhHHH
Q 020064 245 FLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCP--MMSAWDLHKAWPEADFKVVADAGHSAN-----EPGIAAELV 317 (331)
Q Consensus 245 ~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~gH~~~-----~~~~~~~~~ 317 (331)
.......+..+ .|++|++|++|.+++ ...++.+.+...+++++++++++|.+. .+. .+++.
T Consensus 237 ---------~p~~~~~l~~l--pP~li~~G~~D~~~~~~~~~a~~l~~~g~~~~l~~~~g~~H~f~~~~~~~~~-~~~~~ 304 (317)
T 3qh4_A 237 ---------VPGRRGQLAGL--PATLITCGEIDPFRDEVLDYAQRLLGAGVSTELHIFPRACHGFDSLLPEWTT-SQRLF 304 (317)
T ss_dssp ---------CGGGCSCCTTC--CCEEEEEEEESTTHHHHHHHHHHHHHTTCCEEEEEEEEEETTHHHHCTTSHH-HHHHH
T ss_pred ---------CCCcccccCCC--CceeEEecCcCCCchhHHHHHHHHHHcCCCEEEEEeCCCccchhhhcCCchH-HHHHH
Confidence 00011223333 599999999999987 445556666667889999999999853 343 78999
Q ss_pred HHHHHHHHhhh
Q 020064 318 ATNEKLKNLIK 328 (331)
Q Consensus 318 ~~i~~fl~~~~ 328 (331)
+.+.+||++..
T Consensus 305 ~~~~~~l~~~l 315 (317)
T 3qh4_A 305 AMQGHALADAF 315 (317)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999998764
|
| >2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A 1mnq_A | Back alignment and structure |
|---|
Probab=99.86 E-value=6e-21 Score=153.51 Aligned_cols=209 Identities=12% Similarity=0.034 Sum_probs=133.1
Q ss_pred cEEEecc--CCCCCCCCCcccccCCCCcEEEEecCCCCCCCCC---CCCCCccchHHHHHHHHHHHHHh-CCCcEEEEEe
Q 020064 47 PVVFLHG--GPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTP---HACLDQNTTWDLIDDIEKLRQHL-EIPEWQVFGG 120 (331)
Q Consensus 47 ~vl~~HG--~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~---~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~lvG~ 120 (331)
+++++|| ++++...|......+..+++|+++|+||+|.+.. .. ...+++++++++.+.++.+ ..++++++||
T Consensus 91 ~l~~~hg~g~~~~~~~~~~l~~~L~~~~~v~~~d~~G~g~~~~~~~~~--~~~~~~~~a~~~~~~i~~~~~~~p~~l~G~ 168 (319)
T 2hfk_A 91 VLVGCTGTAANGGPHEFLRLSTSFQEERDFLAVPLPGYGTGTGTGTAL--LPADLDTALDAQARAILRAAGDAPVVLLGH 168 (319)
T ss_dssp EEEEECCCCTTCSTTTTHHHHHTTTTTCCEEEECCTTCCBC---CBCC--EESSHHHHHHHHHHHHHHHHTTSCEEEEEE
T ss_pred cEEEeCCCCCCCcHHHHHHHHHhcCCCCceEEecCCCCCCCcccccCC--CCCCHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 8999998 4444444443334446899999999999999721 11 2468999999999888877 4678999999
Q ss_pred ChhHHHHHHHHHhC----CCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhccccCCC
Q 020064 121 SWGSTLALAYSLAH----PDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSD 196 (331)
Q Consensus 121 S~Gg~~a~~~a~~~----p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (331)
||||.+|+.+|.+. ++++++++++++....... ....+...+. ......
T Consensus 169 S~GG~vA~~~A~~l~~~~g~~v~~lvl~d~~~~~~~~---------------~~~~~~~~l~----~~~~~~-------- 221 (319)
T 2hfk_A 169 AGGALLAHELAFRLERAHGAPPAGIVLVDPYPPGHQE---------------PIEVWSRQLG----EGLFAG-------- 221 (319)
T ss_dssp THHHHHHHHHHHHHHHHHSCCCSEEEEESCCCTTSCH---------------HHHHTHHHHH----HHHHHT--------
T ss_pred CHHHHHHHHHHHHHHHhhCCCceEEEEeCCCCCCchh---------------HHHHHHHHhh----HHHHHh--------
Confidence 99999999999886 4579999999986432110 0000000000 000000
Q ss_pred chHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCC
Q 020064 197 DKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRY 276 (331)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~ 276 (331)
........ .+ .... .+..... . .....+ ++|+++++| +
T Consensus 222 -------------------~~~~~~~~--------~~----~~~~-~~~~~~~----~----~~~~~i-~~Pvl~i~g-~ 259 (319)
T 2hfk_A 222 -------------------ELEPMSDA--------RL----LAMG-RYARFLA----G----PRPGRS-SAPVLLVRA-S 259 (319)
T ss_dssp -------------------CSSCCCHH--------HH----HHHH-HHHHHHH----S----CCCCCC-CSCEEEEEE-S
T ss_pred -------------------hccccchH--------HH----HHHH-HHHHHHH----h----CCCCCc-CCCEEEEEc-C
Confidence 00000000 00 0000 0000000 0 023567 699999999 9
Q ss_pred CCccCCcc-hHHHHHhCC-CCcEEEecCCCCCCCc-CCchhHHHHHHHHHHHhhh
Q 020064 277 DVCCPMMS-AWDLHKAWP-EADFKVVADAGHSANE-PGIAAELVATNEKLKNLIK 328 (331)
Q Consensus 277 D~~~~~~~-~~~~~~~~~-~~~~~~~~~~gH~~~~-~~~~~~~~~~i~~fl~~~~ 328 (331)
|..++... ...+.+..+ +.+++.++ +||+.+. +. ++++.+.|.+||++..
T Consensus 260 D~~~~~~~~~~~~~~~~~~~~~~~~v~-g~H~~~~~e~-~~~~~~~i~~~L~~~~ 312 (319)
T 2hfk_A 260 EPLGDWQEERGDWRAHWDLPHTVADVP-GDHFTMMRDH-APAVAEAVLSWLDAIE 312 (319)
T ss_dssp SCSSCCCGGGCCCSCCCSSCSEEEEES-SCTTHHHHTC-HHHHHHHHHHHHHHHH
T ss_pred CCCCCccccccchhhcCCCCCEEEEeC-CCcHHHHHHh-HHHHHHHHHHHHHhcC
Confidence 99988776 555666554 57899999 6999654 64 9999999999998764
|
| >3e4d_A Esterase D; S-formylglutathione hydrolase, hydrolase fold family, catalytic triad, kinetics, proposed reaction mechanism; HET: MSE; 2.01A {Agrobacterium tumefaciens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.86 E-value=3.1e-21 Score=152.49 Aligned_cols=120 Identities=13% Similarity=0.114 Sum_probs=83.5
Q ss_pred CCCceEEEEeCCC-----CCCCcEEEeccCCCCCCCCC----cccccCCCCcEEEEecCCCCCCCCCCCC----------
Q 020064 30 SDIHTIYWEQSGN-----PTGHPVVFLHGGPGGGTTPS----NRRFFDPDFYRIILFDQRGAGKSTPHAC---------- 90 (331)
Q Consensus 30 ~~g~~l~~~~~g~-----~~~~~vl~~HG~~~~~~~~~----~~~~~~~~g~~vi~~D~~G~G~s~~~~~---------- 90 (331)
..|..+.+..+-+ ...|+||++||++++...+. ....+.+.||.|+++|+||+|.|.....
T Consensus 24 ~~g~~~~~~v~~P~~~~~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~g~G~s~~~~~~~~~~g~~~~ 103 (278)
T 3e4d_A 24 TLKSEMTFAVYVPPKAIHEPCPVVWYLSGLTCTHANVMEKGEYRRMASELGLVVVCPDTSPRGNDVPDELTNWQMGKGAG 103 (278)
T ss_dssp TTTEEEEEEEEECGGGGTSCEEEEEEECCTTCCSHHHHHHSCCHHHHHHHTCEEEECCSSCCSTTSCCCTTCTTSBTTBC
T ss_pred ccCCcceEEEEcCCCCCCCCCCEEEEEcCCCCCccchhhcccHHHHHhhCCeEEEecCCcccCcccccccccccccCCcc
Confidence 3455666554432 23468999999776644322 2222334599999999999998854320
Q ss_pred ----------CCccc-hHHHHHHHHHHHHHh-CC--CcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccc
Q 020064 91 ----------LDQNT-TWDLIDDIEKLRQHL-EI--PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLL 149 (331)
Q Consensus 91 ----------~~~~~-~~~~~~~~~~~~~~~-~~--~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~ 149 (331)
...+. .+.+++++..+++.. +. ++++|+||||||.+++.+|.++|++++++++++|...
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~ 176 (278)
T 3e4d_A 104 FYLDATEEPWSEHYQMYSYVTEELPALIGQHFRADMSRQSIFGHSMGGHGAMTIALKNPERFKSCSAFAPIVA 176 (278)
T ss_dssp TTSBCCSTTTTTTCBHHHHHHTHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCSCEEEESCCSC
T ss_pred ccccCCcCcccchhhHHHHHHHHHHHHHHhhcCCCcCCeEEEEEChHHHHHHHHHHhCCcccceEEEeCCccc
Confidence 00112 334456677777654 65 7899999999999999999999999999999998654
|
| >3h2g_A Esterase; xanthomonas oryzae PV. oryzae, cell WALL degrading enzyme, RICE, virulence, innate immune responses, pathogenesis; 1.86A {Xanthomonas oryzae PV} PDB: 3h2j_A 3h2k_A* 3h2h_A 3h2i_A | Back alignment and structure |
|---|
Probab=99.85 E-value=1.6e-21 Score=161.71 Aligned_cols=107 Identities=16% Similarity=0.009 Sum_probs=77.2
Q ss_pred CCCcEEEeccCCCCCC------------CCCcccccCCCCcEEEEecCCCCCCCCCCCCCCc------cchHHHHHHHHH
Q 020064 44 TGHPVVFLHGGPGGGT------------TPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQ------NTTWDLIDDIEK 105 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~------------~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~------~~~~~~~~~~~~ 105 (331)
..|+||++||++++.. +...+..++++||+|+++|+||||.|........ ....+.++++..
T Consensus 78 ~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~V~~~D~~G~G~s~~~~~~~~~~~~~~~~~~d~~~~~~~ 157 (397)
T 3h2g_A 78 PYPLLGWGHPTEALRAQEQAKEIRDAKGDDPLVTRLASQGYVVVGSDYLGLGKSNYAYHPYLHSASEASATIDAMRAARS 157 (397)
T ss_dssp CEEEEEEECCCCCBTTCCHHHHHHHTTTCSHHHHTTGGGTCEEEEECCTTSTTCCCSSCCTTCHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEeCCCcCCCCcccccccccccchHHHHHHHHHCCCEEEEecCCCCCCCCCCccchhhhhhHHHHHHHHHHHHHH
Confidence 3467899999766532 4456677888999999999999999964431111 245566777777
Q ss_pred HHHHhCC---CcEEEEEeChhHHHHHHHHHh-CC----C-ceeeEEEeccccch
Q 020064 106 LRQHLEI---PEWQVFGGSWGSTLALAYSLA-HP----D-KVTGLVLRGIFLLR 150 (331)
Q Consensus 106 ~~~~~~~---~~v~lvG~S~Gg~~a~~~a~~-~p----~-~v~~li~~~~~~~~ 150 (331)
+++.++. ++++++||||||.+++.++.. .+ + .+.+++..+++...
T Consensus 158 ~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~l 211 (397)
T 3h2g_A 158 VLQHLKTPLSGKVMLSGYSQGGHTAMATQREIEAHLSKEFHLVASAPISGPYAL 211 (397)
T ss_dssp HHHHHTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTTTSEEEEEEEESCCSSH
T ss_pred HHHhcCCCCCCcEEEEEECHHHHHHHHHHHHhhhhcCcCcceEEEecccccccH
Confidence 8888876 689999999999999988732 22 1 56777776665543
|
| >3tjm_A Fatty acid synthase; thioesterase domain, fatty acid synthesis, hydrolase-hydrola inhibitor complex; HET: 7FA; 1.48A {Homo sapiens} PDB: 1xkt_A | Back alignment and structure |
|---|
Probab=99.85 E-value=1.9e-20 Score=147.89 Aligned_cols=105 Identities=14% Similarity=0.076 Sum_probs=81.1
Q ss_pred eEEEEeCCCCCCCcEEEeccCCCCCCCCC-cccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCC
Q 020064 34 TIYWEQSGNPTGHPVVFLHGGPGGGTTPS-NRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEI 112 (331)
Q Consensus 34 ~l~~~~~g~~~~~~vl~~HG~~~~~~~~~-~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (331)
.+.....+..++++|||+||++++...|. +...+ . ++|+++|+++. . ...+++++++++.++++.+..
T Consensus 13 ~~~~~~~~~~~~~~l~~~hg~~~~~~~~~~~~~~L-~--~~v~~~d~~~~-----~---~~~~~~~~a~~~~~~i~~~~~ 81 (283)
T 3tjm_A 13 TLMRLNSVQSSERPLFLVHPIEGSTTVFHSLASRL-S--IPTYGLQCTRA-----A---PLDSIHSLAAYYIDCIRQVQP 81 (283)
T ss_dssp SEEECSCCCSSSCCEEEECCTTCCSGGGHHHHHHC-S--SCEEEECCCTT-----S---CCSCHHHHHHHHHHHHTTTCC
T ss_pred cceecCCCCCCCCeEEEECCCCCCHHHHHHHHHhc-C--ceEEEEecCCC-----C---CCCCHHHHHHHHHHHHHHhCC
Confidence 33333334446789999999777655544 44444 4 99999999641 1 246899999999999998864
Q ss_pred -CcEEEEEeChhHHHHHHHHHhC---CCcee---eEEEeccccc
Q 020064 113 -PEWQVFGGSWGSTLALAYSLAH---PDKVT---GLVLRGIFLL 149 (331)
Q Consensus 113 -~~v~lvG~S~Gg~~a~~~a~~~---p~~v~---~li~~~~~~~ 149 (331)
++++|+||||||.+++.+|.+. |+++. +++++++.+.
T Consensus 82 ~~~~~l~GhS~Gg~va~~~a~~~~~~~~~v~~~~~lvlid~~~~ 125 (283)
T 3tjm_A 82 EGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNSLFLFDGSPT 125 (283)
T ss_dssp SSCCEEEEETHHHHHHHHHHHHHHHHHTTSCCCCEEEEESCCTT
T ss_pred CCCEEEEEECHhHHHHHHHHHHHHHcCCCCCccceEEEEcCCch
Confidence 7999999999999999999866 88888 9999998654
|
| >3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga maritima} PDB: 3doi_A | Back alignment and structure |
|---|
Probab=99.85 E-value=3.1e-20 Score=153.04 Aligned_cols=193 Identities=14% Similarity=0.037 Sum_probs=133.3
Q ss_pred CccceeEeC-CCceEEEEeCCCCC------CCcEEEeccCCCCCCCCC-------------cccccCCCCcEEEEecCCC
Q 020064 22 YSTGILKVS-DIHTIYWEQSGNPT------GHPVVFLHGGPGGGTTPS-------------NRRFFDPDFYRIILFDQRG 81 (331)
Q Consensus 22 ~~~~~~~~~-~g~~l~~~~~g~~~------~~~vl~~HG~~~~~~~~~-------------~~~~~~~~g~~vi~~D~~G 81 (331)
++...+... +|.++.|..+.+.+ .|+||++||++++...+. ........++.|+++|.+|
T Consensus 144 ~~~~~~~~~~dg~~l~~~v~~P~~~~~~~~~Pvvv~lHG~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~vv~pd~~g 223 (380)
T 3doh_A 144 FLAFTFKDPETGVEIPYRLFVPKDVNPDRKYPLVVFLHGAGERGTDNYLQVAGNRGAVVWAQPRYQVVHPCFVLAPQCPP 223 (380)
T ss_dssp EEEEEEECTTTCCEEEEEEECCSSCCTTSCEEEEEEECCGGGCSSSSSHHHHSSTTTTGGGSHHHHTTSCCEEEEECCCT
T ss_pred ccceeeccCCCCcEEEEEEEcCCCCCCCCCccEEEEECCCCCCCCchhhhhhccccceeecCccccccCCEEEEEecCCC
Confidence 334455566 78888887664322 267999999764422110 0111234678999999998
Q ss_pred CCCCCCCC------CCCccchHHHHHHHHHHHHHhCCC--cEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhh
Q 020064 82 AGKSTPHA------CLDQNTTWDLIDDIEKLRQHLEIP--EWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKE 153 (331)
Q Consensus 82 ~G~s~~~~------~~~~~~~~~~~~~~~~~~~~~~~~--~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~ 153 (331)
.+...... .......+++.+.+..+++..+.+ +++|+|||+||.+++.++..+|++++++|++++....
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~~~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~sg~~~~--- 300 (380)
T 3doh_A 224 NSSWSTLFTDRENPFNPEKPLLAVIKIIRKLLDEYNIDENRIYITGLSMGGYGTWTAIMEFPELFAAAIPICGGGDV--- 300 (380)
T ss_dssp TCCSBTTTTCSSCTTSBCHHHHHHHHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCG---
T ss_pred CCcccccccccccccCCcchHHHHHHHHHHHHHhcCCCcCcEEEEEECccHHHHHHHHHhCCccceEEEEecCCCCh---
Confidence 65432211 011345667777777888887754 7999999999999999999999999999999874310
Q ss_pred hhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHH
Q 020064 154 IDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIF 233 (331)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (331)
T Consensus 301 -------------------------------------------------------------------------------- 300 (380)
T 3doh_A 301 -------------------------------------------------------------------------------- 300 (380)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCC----CCcEEEecCC------
Q 020064 234 SLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWP----EADFKVVADA------ 303 (331)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~------ 303 (331)
..+.+++++|+|+++|++|..+|++.++.+.+.+. +.++++++++
T Consensus 301 -------------------------~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~h~~h~ 355 (380)
T 3doh_A 301 -------------------------SKVERIKDIPIWVFHAEDDPVVPVENSRVLVKKLAEIGGKVRYTEYEKGFMEKHG 355 (380)
T ss_dssp -------------------------GGGGGGTTSCEEEEEETTCSSSCTHHHHHHHHHHHHTTCCEEEEEECTTHHHHTT
T ss_pred -------------------------hhhhhccCCCEEEEecCCCCccCHHHHHHHHHHHHHCCCceEEEEecCCcccCCC
Confidence 01122214899999999999999998888887763 4789999999
Q ss_pred --CCCCCcCCchhHHHH--HHHHHHHhh
Q 020064 304 --GHSANEPGIAAELVA--TNEKLKNLI 327 (331)
Q Consensus 304 --gH~~~~~~~~~~~~~--~i~~fl~~~ 327 (331)
+|.. ...... .+.+||.+.
T Consensus 356 ~~~H~~-----~~~~~~~~~i~~wL~~~ 378 (380)
T 3doh_A 356 WDPHGS-----WIPTYENQEAIEWLFEQ 378 (380)
T ss_dssp CCTTCT-----HHHHHTCHHHHHHHHTC
T ss_pred CCCchh-----HHHhcCCHHHHHHHHhh
Confidence 6653 333344 778888653
|
| >3i6y_A Esterase APC40077; lipase, structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic hydrolase; HET: MSE; 1.75A {Oleispira antarctica} PDB: 3s8y_A | Back alignment and structure |
|---|
Probab=99.85 E-value=1e-20 Score=149.58 Aligned_cols=120 Identities=12% Similarity=0.054 Sum_probs=81.9
Q ss_pred CCCceEEEEeCCC------CCCCcEEEeccCCCCCCCCC----cccccCCCCcEEEEecCCCCCCCCCCCCC--------
Q 020064 30 SDIHTIYWEQSGN------PTGHPVVFLHGGPGGGTTPS----NRRFFDPDFYRIILFDQRGAGKSTPHACL-------- 91 (331)
Q Consensus 30 ~~g~~l~~~~~g~------~~~~~vl~~HG~~~~~~~~~----~~~~~~~~g~~vi~~D~~G~G~s~~~~~~-------- 91 (331)
.+|..+.+..+-+ ...|+||++||++++...+. ....+.+.|+.|+++|.+++|.+......
T Consensus 26 ~~g~~~~~~v~~P~~~~~~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~pd~~~~g~~~~~~~~~~~G~g~~ 105 (280)
T 3i6y_A 26 TLNCAMRFAIYLPPQASTGAKVPVLYWLSGLTCSDENFMQKAGAQRLAAELGIAIVAPDTSPRGEGVADDEGYDLGQGAG 105 (280)
T ss_dssp TTTEEEEEEEEECGGGGTTCCEEEEEEECCTTCCSSHHHHHSCCHHHHHHHTCEEEEECSSCCSTTCCCCSSTTSSTTCC
T ss_pred ccCCeeEEEEEeCCCCCCCCCccEEEEecCCCCChhHHhhcccHHHHHhhCCeEEEEeCCcccccccCcccccccccCcc
Confidence 3555666554432 23468999999776644322 22333357999999999987765432210
Q ss_pred -----------Cccc-hHHHHHHHHHHHH-HhCC-CcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccc
Q 020064 92 -----------DQNT-TWDLIDDIEKLRQ-HLEI-PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLL 149 (331)
Q Consensus 92 -----------~~~~-~~~~~~~~~~~~~-~~~~-~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~ 149 (331)
.... ...+.+++..+++ .+.. ++++|+|||+||.+++.+|.++|++++++|++++...
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~~ 177 (280)
T 3i6y_A 106 FYVNATQAPWNRHYQMYDYVVNELPELIESMFPVSDKRAIAGHSMGGHGALTIALRNPERYQSVSAFSPINN 177 (280)
T ss_dssp TTCBCCSTTGGGTCBHHHHHHTHHHHHHHHHSSEEEEEEEEEETHHHHHHHHHHHHCTTTCSCEEEESCCCC
T ss_pred ccccccCCCccchhhHHHHHHHHHHHHHHHhCCCCCCeEEEEECHHHHHHHHHHHhCCccccEEEEeCCccc
Confidence 0012 3345567777774 4454 7899999999999999999999999999999998654
|
| >1lns_A X-prolyl dipeptidyl aminopetidase; alpha beta hydrolase fold; 2.20A {Lactococcus lactis} SCOP: a.40.2.1 b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.84 E-value=1.1e-19 Score=160.72 Aligned_cols=225 Identities=16% Similarity=0.138 Sum_probs=130.0
Q ss_pred cccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCC--------------------CcEEEEEeChhH
Q 020064 65 RFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEI--------------------PEWQVFGGSWGS 124 (331)
Q Consensus 65 ~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~v~lvG~S~Gg 124 (331)
..++++||.|+++|+||+|.|+.... ... .+.++|+.++++.+.. .+|.++|||+||
T Consensus 275 ~~la~~GYaVv~~D~RG~G~S~G~~~--~~~-~~e~~D~~a~IdwL~~~~~~~~d~~~~~~v~q~~~~grVgl~G~SyGG 351 (763)
T 1lns_A 275 DYFLTRGFASIYVAGVGTRSSDGFQT--SGD-YQQIYSMTAVIDWLNGRARAYTSRKKTHEIKASWANGKVAMTGKSYLG 351 (763)
T ss_dssp HHHHTTTCEEEEECCTTSTTSCSCCC--TTS-HHHHHHHHHHHHHHTTSSCEESSTTCCCEECCTTEEEEEEEEEETHHH
T ss_pred HHHHHCCCEEEEECCCcCCCCCCcCC--CCC-HHHHHHHHHHHHHHhhcccccccccccccccccCCCCcEEEEEECHHH
Confidence 45678999999999999999986542 223 2567888888888762 389999999999
Q ss_pred HHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhccccCCCchHHHHHH
Q 020064 125 TLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAA 204 (331)
Q Consensus 125 ~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (331)
.+++.+|..+|+.++++|..++...... .+...+.. ..+.. ........+............. ....
T Consensus 352 ~ial~~Aa~~p~~lkaiV~~~~~~d~~~---~~~~~g~~-~~~~g-------~~~~~~~~l~~~~~~~~~~~g~--~~~~ 418 (763)
T 1lns_A 352 TMAYGAATTGVEGLELILAEAGISSWYN---YYRENGLV-RSPGG-------FPGEDLDVLAALTYSRNLDGAD--FLKG 418 (763)
T ss_dssp HHHHHHHTTTCTTEEEEEEESCCSBHHH---HHBSSSSB-CCCTT-------CTTCCHHHHHHHHCGGGGSHHH--HHHH
T ss_pred HHHHHHHHhCCcccEEEEEecccccHHH---Hhhhcchh-hhccc-------CCchhhhHHhHHHHhhhcCcch--hhhH
Confidence 9999999999999999999988653221 00010000 00000 0000000000000000000000 0000
Q ss_pred HHHhhhH-HHhhh-cCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCCCccCC
Q 020064 205 ARAWTKW-EMMTA-HLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPM 282 (331)
Q Consensus 205 ~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~ 282 (331)
...+... ..... .....+ .... ++. ..+....+.+| ++|+|+++|.+|..+|+
T Consensus 419 ~~~~~~~~~~~~~~~~~~~~------~~~~-----------~w~-------~~s~~~~l~~I-~~PvLii~G~~D~~vp~ 473 (763)
T 1lns_A 419 NAEYEKRLAEMTAALDRKSG------DYNQ-----------FWH-------DRNYLINTDKV-KADVLIVHGLQDWNVTP 473 (763)
T ss_dssp HHHHHHHHHHHHHHHCTTTC------CCCH-----------HHH-------TTBGGGGGGGC-CSEEEEEEETTCCSSCT
T ss_pred HHHHHHHHHHHHhhhhhccC------chhH-----------Hhh-------ccChhhHhhcC-CCCEEEEEECCCCCCCh
Confidence 0000000 00000 000000 0000 000 12345578889 59999999999999999
Q ss_pred cchHHHHHhCCC--CcEEEecCCCCCCCcCCchhHHHHHHHHHHHhhhcC
Q 020064 283 MSAWDLHKAWPE--ADFKVVADAGHSANEPGIAAELVATNEKLKNLIKNG 330 (331)
Q Consensus 283 ~~~~~~~~~~~~--~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~~~ 330 (331)
..+.++.+.+++ ....++.++||....+..+..+.+.+.+|+++..+|
T Consensus 474 ~~a~~l~~al~~~~~~~l~i~~~gH~~~~~~~~~~~~~~i~~Ffd~~Lkg 523 (763)
T 1lns_A 474 EQAYNFWKALPEGHAKHAFLHRGAHIYMNSWQSIDFSETINAYFVAKLLD 523 (763)
T ss_dssp HHHHHHHHHSCTTCCEEEEEESCSSCCCTTBSSCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhhccCCCeEEEEeCCcccCccccchHHHHHHHHHHHHHHhcC
Confidence 999999999974 334456779999765422566788888888876543
|
| >4f21_A Carboxylesterase/phospholipase family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.4e-19 Score=138.96 Aligned_cols=179 Identities=17% Similarity=0.171 Sum_probs=116.0
Q ss_pred CCCcEEEeccCCCCCC-CCCcccccCC--CCcEEEEecCCCC--------------CCCCCCC-----CCCccchHHHHH
Q 020064 44 TGHPVVFLHGGPGGGT-TPSNRRFFDP--DFYRIILFDQRGA--------------GKSTPHA-----CLDQNTTWDLID 101 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~-~~~~~~~~~~--~g~~vi~~D~~G~--------------G~s~~~~-----~~~~~~~~~~~~ 101 (331)
.+.+|||+||.+++.. +..+...+.. .++++++|+-|-. ....... ......+...++
T Consensus 36 ~~~~VI~LHG~G~~~~dl~~l~~~l~~~~~~~~~i~P~Ap~~~~~~~~~~~~~~Wf~~~~~~~~~~~~~~d~~~i~~~~~ 115 (246)
T 4f21_A 36 ARFCVIWLHGLGADGHDFVDIVNYFDVSLDEIRFIFPHADIIPVTINMGMQMRAWYDIKSLDANSLNRVVDVEGINSSIA 115 (246)
T ss_dssp CCEEEEEEEC--CCCCCGGGGGGGCCSCCTTEEEEEECGGGSCTTTHHHHHHHSCTTCCCC---CGGGGSCCC-CHHHHH
T ss_pred CCeEEEEEcCCCCCHHHHHHHHHHhhhcCCCeEEEeCCCCccccccCCCCCcccccccccccccchhhhhhHHHHHHHHH
Confidence 4568999999666544 4444444432 4788999875421 1111100 001123344455
Q ss_pred HHHHHHHH-----hCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhcc
Q 020064 102 DIEKLRQH-----LEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDL 176 (331)
Q Consensus 102 ~~~~~~~~-----~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (331)
.+..+++. ++.++++++|+|+||.+++.++.++|+++.++|.+++........
T Consensus 116 ~i~~li~~~~~~gi~~~ri~l~GfSqGg~~a~~~~~~~~~~~a~~i~~sG~lp~~~~~---------------------- 173 (246)
T 4f21_A 116 KVNKLIDSQVNQGIASENIILAGFSQGGIIATYTAITSQRKLGGIMALSTYLPAWDNF---------------------- 173 (246)
T ss_dssp HHHHHHHHHHHC-CCGGGEEEEEETTTTHHHHHHHTTCSSCCCEEEEESCCCTTHHHH----------------------
T ss_pred HHHHHHHHHHHcCCChhcEEEEEeCchHHHHHHHHHhCccccccceehhhccCccccc----------------------
Confidence 55555543 244689999999999999999999999999999998754321000
Q ss_pred CCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcch
Q 020064 177 IPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSF 256 (331)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (331)
...
T Consensus 174 -----------------------------------------------------------------------------~~~ 176 (246)
T 4f21_A 174 -----------------------------------------------------------------------------KGK 176 (246)
T ss_dssp -----------------------------------------------------------------------------STT
T ss_pred -----------------------------------------------------------------------------ccc
Confidence 000
Q ss_pred hhhhccccccccEEEEecCCCCccCCcchHHHHHhCC----CCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhhhc
Q 020064 257 LLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWP----EADFKVVADAGHSANEPGIAAELVATNEKLKNLIKN 329 (331)
Q Consensus 257 ~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~~ 329 (331)
. .-... ++|++++||++|+++|.+.+++..+.+. ++++.++++.||.+..+ -++.+.+||++..+
T Consensus 177 ~--~~~~~-~~Pvl~~HG~~D~vVp~~~~~~~~~~L~~~g~~v~~~~y~g~gH~i~~~-----~l~~~~~fL~k~l~ 245 (246)
T 4f21_A 177 I--TSINK-GLPILVCHGTDDQVLPEVLGHDLSDKLKVSGFANEYKHYVGMQHSVCME-----EIKDISNFIAKTFK 245 (246)
T ss_dssp C--CGGGT-TCCEEEEEETTCSSSCHHHHHHHHHHHHTTTCCEEEEEESSCCSSCCHH-----HHHHHHHHHHHHTT
T ss_pred c--ccccc-CCchhhcccCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCccCHH-----HHHHHHHHHHHHhC
Confidence 0 00011 5899999999999999998888777662 46788999999987433 36778999988653
|
| >2cb9_A Fengycin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha/beta- hydrolases, catalytic triade, hydrolase; 1.8A {Bacillus subtilis} PDB: 2cbg_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=9.5e-21 Score=146.27 Aligned_cols=197 Identities=12% Similarity=0.012 Sum_probs=122.8
Q ss_pred CCCcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhC-CCcEEEEEeCh
Q 020064 44 TGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLE-IPEWQVFGGSW 122 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~lvG~S~ 122 (331)
++++|+++||++++...|......+..+|+|+++|+||++ ++++++.+.++.+. .++++++||||
T Consensus 21 ~~~~l~~~hg~~~~~~~~~~~~~~l~~~~~v~~~d~~g~~--------------~~~~~~~~~i~~~~~~~~~~l~GhS~ 86 (244)
T 2cb9_A 21 GGKNLFCFPPISGFGIYFKDLALQLNHKAAVYGFHFIEED--------------SRIEQYVSRITEIQPEGPYVLLGYSA 86 (244)
T ss_dssp CSSEEEEECCTTCCGGGGHHHHHHTTTTSEEEEECCCCST--------------THHHHHHHHHHHHCSSSCEEEEEETH
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHhCCCceEEEEcCCCHH--------------HHHHHHHHHHHHhCCCCCEEEEEECH
Confidence 5788999999777655444444444578999999999863 24566777777775 57899999999
Q ss_pred hHHHHHHHHHhC---CCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhccccCCCchH
Q 020064 123 GSTLALAYSLAH---PDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKE 199 (331)
Q Consensus 123 Gg~~a~~~a~~~---p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (331)
||.+++.+|.+. ++++.++|++++...... ... .. ....+.. +. ...
T Consensus 87 Gg~va~~~a~~~~~~~~~v~~lvl~~~~~~~~~---------~~~------------~~---~~~~~~~----~~--~~~ 136 (244)
T 2cb9_A 87 GGNLAFEVVQAMEQKGLEVSDFIIVDAYKKDQS---------ITA------------DT---ENDDSAA----YL--PEA 136 (244)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEEESCCCCCSC---------CCC------------C----------C----CS--CHH
T ss_pred hHHHHHHHHHHHHHcCCCccEEEEEcCCCCccc---------ccc------------cc---cHHHHHH----Hh--HHH
Confidence 999999999876 578999999997643100 000 00 0000000 00 000
Q ss_pred HHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecC--CC
Q 020064 200 TQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGR--YD 277 (331)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~--~D 277 (331)
.. ..+. ....... .+.. ....+..+ ++|+++++|+ +|
T Consensus 137 ~~----~~~~-------------------------~~~~~~~-~~~~----------~~~~~~~i-~~Pvl~i~g~~~~D 175 (244)
T 2cb9_A 137 VR----ETVM-------------------------QKKRCYQ-EYWA----------QLINEGRI-KSNIHFIEAGIQTE 175 (244)
T ss_dssp HH----HHHT-------------------------HHHHHHH-HHHH----------HCCCCSCB-SSEEEEEECSBCSC
T ss_pred HH----HHHH-------------------------HHHHHHH-HHHH----------hhccCCCc-CCCEEEEEccCccc
Confidence 00 0000 0000000 0000 00134567 5999999999 88
Q ss_pred CccCCcchHHHHHhCC-CCcEEEecCCCC--CCCcCCchhHHHHHHHHHHHhhh
Q 020064 278 VCCPMMSAWDLHKAWP-EADFKVVADAGH--SANEPGIAAELVATNEKLKNLIK 328 (331)
Q Consensus 278 ~~~~~~~~~~~~~~~~-~~~~~~~~~~gH--~~~~~~~~~~~~~~i~~fl~~~~ 328 (331)
.+ +++....+.+..+ +.+++++++ || ++..+. ++.+.+.|.+||++..
T Consensus 176 ~~-~~~~~~~w~~~~~~~~~~~~i~g-gH~~~~~~~~-~~~~~~~i~~~L~~~~ 226 (244)
T 2cb9_A 176 TS-GAMVLQKWQDAAEEGYAEYTGYG-AHKDMLEGEF-AEKNANIILNILDKIN 226 (244)
T ss_dssp CC-HHHHTTSSGGGBSSCEEEEECSS-BGGGTTSHHH-HHHHHHHHHHHHHTC-
T ss_pred cc-cccchhHHHHhcCCCCEEEEecC-ChHHHcChHH-HHHHHHHHHHHHhcCc
Confidence 74 3444455555554 688999995 99 666665 9999999999998654
|
| >4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=1.7e-20 Score=147.02 Aligned_cols=184 Identities=17% Similarity=0.124 Sum_probs=117.8
Q ss_pred EEEEeCCC---CCCCcEEEeccCCCCCC-CCCcccccCC--CCcEEEEecCC------CCCCCCCC-----CCCCcc---
Q 020064 35 IYWEQSGN---PTGHPVVFLHGGPGGGT-TPSNRRFFDP--DFYRIILFDQR------GAGKSTPH-----ACLDQN--- 94 (331)
Q Consensus 35 l~~~~~g~---~~~~~vl~~HG~~~~~~-~~~~~~~~~~--~g~~vi~~D~~------G~G~s~~~-----~~~~~~--- 94 (331)
+.|...+. +..|.|||+||.+++.. +..+...+.. .++.+++++-| |.|.+--. ......
T Consensus 53 l~y~~~p~~~~~~~plVI~LHG~G~~~~~~~~~~~~l~~~~~~~~~v~P~Ap~~~~~~~~G~~Wfd~~~~~~~~~~~~~~ 132 (285)
T 4fhz_A 53 LTFGRRGAAPGEATSLVVFLHGYGADGADLLGLAEPLAPHLPGTAFVAPDAPEPCRANGFGFQWFPIPWLDGSSETAAAE 132 (285)
T ss_dssp CCEEEEESCTTCCSEEEEEECCTTBCHHHHHTTHHHHGGGSTTEEEEEECCSEECTTSSSCEESSCCHHHHCCCHHHHHH
T ss_pred ceeecCCCCCCCCCcEEEEEcCCCCCHHHHHHHHHHHHHhCCCeEEEecCCCcccccCCCcccccccccccCcccchhhH
Confidence 44544442 23356999999766533 3334443332 47889998754 33332100 000001
Q ss_pred chHHHHHHHHHHH----HHhCC--CcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChh
Q 020064 95 TTWDLIDDIEKLR----QHLEI--PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPD 168 (331)
Q Consensus 95 ~~~~~~~~~~~~~----~~~~~--~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (331)
.+.+.++++.+++ +..++ ++|+++|+|+||.+++.++.++|+++.++|.+++......
T Consensus 133 ~~~~~~~~l~~~i~~~~~~~~id~~ri~l~GfS~Gg~~a~~~a~~~p~~~a~vv~~sG~l~~~~---------------- 196 (285)
T 4fhz_A 133 GMAAAARDLDAFLDERLAEEGLPPEALALVGFSQGTMMALHVAPRRAEEIAGIVGFSGRLLAPE---------------- 196 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSSSCCSEEEEESCCCSCHH----------------
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCccceEEEEeCHHHHHHHHHHHhCcccCceEEEeecCccCch----------------
Confidence 1222233444443 33444 5899999999999999999999999999999886432110
Q ss_pred hHHhhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhcc
Q 020064 169 AWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNK 248 (331)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (331)
T Consensus 197 -------------------------------------------------------------------------------- 196 (285)
T 4fhz_A 197 -------------------------------------------------------------------------------- 196 (285)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhC----CCCcEEEecCCCCCCCcCCchhHHHHHHHHHH
Q 020064 249 GFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAW----PEADFKVVADAGHSANEPGIAAELVATNEKLK 324 (331)
Q Consensus 249 ~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl 324 (331)
......+. +.|++++||++|+++|.+.++++.+.+ -+++++++++.||.+..+ .++.+.+||
T Consensus 197 --------~~~~~~~~-~~Pvl~~hG~~D~~Vp~~~~~~~~~~L~~~g~~~~~~~y~g~gH~i~~~-----~l~~~~~fL 262 (285)
T 4fhz_A 197 --------RLAEEARS-KPPVLLVHGDADPVVPFADMSLAGEALAEAGFTTYGHVMKGTGHGIAPD-----GLSVALAFL 262 (285)
T ss_dssp --------HHHHHCCC-CCCEEEEEETTCSSSCTHHHHHHHHHHHHTTCCEEEEEETTCCSSCCHH-----HHHHHHHHH
T ss_pred --------hhhhhhhh-cCcccceeeCCCCCcCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHH-----HHHHHHHHH
Confidence 00001122 589999999999999999888777765 356888999999987432 366788898
Q ss_pred Hhhh
Q 020064 325 NLIK 328 (331)
Q Consensus 325 ~~~~ 328 (331)
++..
T Consensus 263 ~~~L 266 (285)
T 4fhz_A 263 KERL 266 (285)
T ss_dssp HHHC
T ss_pred HHHC
Confidence 7754
|
| >1ei9_A Palmitoyl protein thioesterase 1; alpha/beta hydrolase, glycoprotein, hydrolase; HET: NDG NAG; 2.25A {Bos taurus} SCOP: c.69.1.13 PDB: 1eh5_A* 1exw_A* 3gro_A | Back alignment and structure |
|---|
Probab=99.83 E-value=2e-21 Score=152.23 Aligned_cols=104 Identities=12% Similarity=0.103 Sum_probs=75.0
Q ss_pred CCCcEEEeccCCCCC----CCCCcccccCCC--CcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhC-C-CcE
Q 020064 44 TGHPVVFLHGGPGGG----TTPSNRRFFDPD--FYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLE-I-PEW 115 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~----~~~~~~~~~~~~--g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~v 115 (331)
.++||||+||++++. .|..+...+.+. |++|+++|+ |||.|.........++.+.++++.+.++.+. . +++
T Consensus 4 ~~~pvVllHG~~~~~~~~~~~~~~~~~L~~~~~g~~v~~~d~-G~g~s~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~ 82 (279)
T 1ei9_A 4 APLPLVIWHGMGDSCCNPLSMGAIKKMVEKKIPGIHVLSLEI-GKTLREDVENSFFLNVNSQVTTVCQILAKDPKLQQGY 82 (279)
T ss_dssp SSCCEEEECCTTCCSCCTTTTHHHHHHHHHHSTTCCEEECCC-SSSHHHHHHHHHHSCHHHHHHHHHHHHHSCGGGTTCE
T ss_pred CCCcEEEECCCCCCCCCcccHHHHHHHHHHHCCCcEEEEEEe-CCCCccccccccccCHHHHHHHHHHHHHhhhhccCCE
Confidence 456799999976654 344444444332 779999998 9998752211011355666666666666532 1 689
Q ss_pred EEEEeChhHHHHHHHHHhCCCc-eeeEEEecccc
Q 020064 116 QVFGGSWGSTLALAYSLAHPDK-VTGLVLRGIFL 148 (331)
Q Consensus 116 ~lvG~S~Gg~~a~~~a~~~p~~-v~~li~~~~~~ 148 (331)
+++||||||.++..++.++|++ |+++|+++++.
T Consensus 83 ~lvGhSmGG~ia~~~a~~~~~~~v~~lv~~~~p~ 116 (279)
T 1ei9_A 83 NAMGFSQGGQFLRAVAQRCPSPPMVNLISVGGQH 116 (279)
T ss_dssp EEEEETTHHHHHHHHHHHCCSSCEEEEEEESCCT
T ss_pred EEEEECHHHHHHHHHHHHcCCcccceEEEecCcc
Confidence 9999999999999999999984 99999998754
|
| >3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase, gibberellin signaling pathway, hydrolase, nucleus, hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp} PDB: 3ed1_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=6.6e-20 Score=149.82 Aligned_cols=100 Identities=19% Similarity=0.105 Sum_probs=70.4
Q ss_pred CCcEEEeccCCCC---CC---CCCcccccCCC-CcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHH------hC
Q 020064 45 GHPVVFLHGGPGG---GT---TPSNRRFFDPD-FYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQH------LE 111 (331)
Q Consensus 45 ~~~vl~~HG~~~~---~~---~~~~~~~~~~~-g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~------~~ 111 (331)
.|+||++||++.. .. +...+..++++ ||.|+++|+|+.+.... ...++|..+.+..+.+. .+
T Consensus 112 ~Pvvv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~Vv~~dyR~~p~~~~-----~~~~~D~~~a~~~l~~~~~~~~~~d 186 (365)
T 3ebl_A 112 FPVIIFFHGGSFVHSSASSTIYDSLCRRFVKLSKGVVVSVNYRRAPEHRY-----PCAYDDGWTALKWVMSQPFMRSGGD 186 (365)
T ss_dssp CEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTSEEEEECCCCTTTSCT-----THHHHHHHHHHHHHHHCTTTEETTT
T ss_pred ceEEEEEcCCccccCCCchhhHHHHHHHHHHHCCCEEEEeeCCCCCCCCC-----cHHHHHHHHHHHHHHhCchhhhCCC
Confidence 4789999996532 22 13344556554 99999999998654332 22345555555555532 33
Q ss_pred CC-cEEEEEeChhHHHHHHHHHhCCC---ceeeEEEeccccc
Q 020064 112 IP-EWQVFGGSWGSTLALAYSLAHPD---KVTGLVLRGIFLL 149 (331)
Q Consensus 112 ~~-~v~lvG~S~Gg~~a~~~a~~~p~---~v~~li~~~~~~~ 149 (331)
.+ +++|+|+|+||.+++.++.+.++ +++++|+++|...
T Consensus 187 ~~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~g~vl~~p~~~ 228 (365)
T 3ebl_A 187 AQARVFLSGDSSGGNIAHHVAVRAADEGVKVCGNILLNAMFG 228 (365)
T ss_dssp TEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCEEEEESCCCC
T ss_pred CCCcEEEEeeCccHHHHHHHHHHHHhcCCceeeEEEEccccC
Confidence 45 89999999999999999998765 7999999998754
|
| >1jmk_C SRFTE, surfactin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha-beta hydrolase, cyclic peptide; 1.71A {Bacillus subtilis} SCOP: c.69.1.22 | Back alignment and structure |
|---|
Probab=99.83 E-value=4.9e-20 Score=141.29 Aligned_cols=202 Identities=13% Similarity=0.111 Sum_probs=121.0
Q ss_pred CCCcEEEeccCCCCCCCCC-cccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCC-CcEEEEEeC
Q 020064 44 TGHPVVFLHGGPGGGTTPS-NRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEI-PEWQVFGGS 121 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~~~~-~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~lvG~S 121 (331)
++++|+++||++++...+. +...+ .. ++|+++|+||+|. .++++.++++.+.. ++++++|||
T Consensus 16 ~~~~l~~~hg~~~~~~~~~~~~~~l-~~-~~v~~~d~~g~~~--------------~~~~~~~~i~~~~~~~~~~l~G~S 79 (230)
T 1jmk_C 16 QEQIIFAFPPVLGYGLMYQNLSSRL-PS-YKLCAFDFIEEED--------------RLDRYADLIQKLQPEGPLTLFGYS 79 (230)
T ss_dssp CSEEEEEECCTTCCGGGGHHHHHHC-TT-EEEEEECCCCSTT--------------HHHHHHHHHHHHCCSSCEEEEEET
T ss_pred CCCCEEEECCCCCchHHHHHHHHhc-CC-CeEEEecCCCHHH--------------HHHHHHHHHHHhCCCCCeEEEEEC
Confidence 4678999999777655444 44444 45 9999999998763 34566666777764 589999999
Q ss_pred hhHHHHHHHHHhCC---CceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhccccCCCch
Q 020064 122 WGSTLALAYSLAHP---DKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDK 198 (331)
Q Consensus 122 ~Gg~~a~~~a~~~p---~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (331)
+||.+++.+|.+.+ ++++++|++++....... .+... .. ......+.... ...
T Consensus 80 ~Gg~ia~~~a~~~~~~~~~v~~lvl~~~~~~~~~~---------------~~~~~--~~-~~~~~~~~~~~-~~~----- 135 (230)
T 1jmk_C 80 AGCSLAFEAAKKLEGQGRIVQRIIMVDSYKKQGVS---------------DLDGR--TV-ESDVEALMNVN-RDN----- 135 (230)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEEEESCCEECCCC--------------------------CCHHHHHHHT-TTC-----
T ss_pred HhHHHHHHHHHHHHHcCCCccEEEEECCCCCCccc---------------ccccc--cH-HHHHHHHHhcC-hhh-----
Confidence 99999999998763 679999999976532100 00000 00 00000000000 000
Q ss_pred HHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhh---hhhhhhhccCCCCCcchhhhhccccccccEEEEecC
Q 020064 199 ETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFAR---IENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGR 275 (331)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~ 275 (331)
.. .........+.. ....+.. .......+ ++|+++++|+
T Consensus 136 -----------------------~~----~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~-~~P~l~i~g~ 177 (230)
T 1jmk_C 136 -----------------------EA----LNSEAVKHGLKQKTHAFYSYYV----------NLISTGQV-KADIDLLTSG 177 (230)
T ss_dssp -----------------------SG----GGSHHHHHHHHHHHHHHHHHHH----------HCCCCSCB-SSEEEEEECS
T ss_pred -----------------------hh----hhhHHHHHHHHHHHHHHHHHhh----------hccccccc-cccEEEEEeC
Confidence 00 000000000000 0000000 00134567 6999999999
Q ss_pred CCCccCCcchHHHHHhC-CCCcEEEecCCCC--CCCcCCchhHHHHHHHHHHHh
Q 020064 276 YDVCCPMMSAWDLHKAW-PEADFKVVADAGH--SANEPGIAAELVATNEKLKNL 326 (331)
Q Consensus 276 ~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH--~~~~~~~~~~~~~~i~~fl~~ 326 (331)
+|..++. ....+.+.. ++.+++++++ || ++..+. ++.+.+.|.+|+++
T Consensus 178 ~D~~~~~-~~~~w~~~~~~~~~~~~i~g-~H~~~~~~~~-~~~~~~~i~~~l~~ 228 (230)
T 1jmk_C 178 ADFDIPE-WLASWEEATTGAYRMKRGFG-THAEMLQGET-LDRNAGILLEFLNT 228 (230)
T ss_dssp SCCCCCT-TEECSGGGBSSCEEEEECSS-CGGGTTSHHH-HHHHHHHHHHHHTC
T ss_pred CCCCCcc-ccchHHHhcCCCeEEEEecC-ChHHHcCcHh-HHHHHHHHHHHHhh
Confidence 9998873 344455555 3678999996 99 777665 89999999999864
|
| >4ezi_A Uncharacterized protein; alpha-beta hydrolases fold, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.15A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.1e-19 Score=147.83 Aligned_cols=110 Identities=13% Similarity=0.053 Sum_probs=74.8
Q ss_pred CCCcEEEeccCCCCCCCC---------CcccccC-CCCcEEEEecCCCCCCCCCCC-CCCc-----cchHHHHHHHHHHH
Q 020064 44 TGHPVVFLHGGPGGGTTP---------SNRRFFD-PDFYRIILFDQRGAGKSTPHA-CLDQ-----NTTWDLIDDIEKLR 107 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~~~---------~~~~~~~-~~g~~vi~~D~~G~G~s~~~~-~~~~-----~~~~~~~~~~~~~~ 107 (331)
..|.|++.||........ .....++ ++||+|+++|+||+|.|.... .+.. .+..+.+.++..++
T Consensus 73 ~~PvV~~~HG~~~~~~~~ps~~~~~~~~~~~~lal~~Gy~Vv~~D~rG~G~s~~~~~~~~~~~~~~~~~~D~~~a~~~~~ 152 (377)
T 4ezi_A 73 QVGIISYQHGTRFERNDVPSRNNEKNYIYLAAYGNSAGYMTVMPDYLGLGDNELTLHPYVQAETLASSSIDMLFAAKELA 152 (377)
T ss_dssp CEEEEEEECCCCCSTTCSGGGCCGGGHHHHHHHTTTTCCEEEEECCTTSTTCCCSSCCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEeCCCcCCcccCCCcCcccchHHHHHHHHhCCcEEEEeCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHHHh
Confidence 346799999965432211 1233456 899999999999999998522 1110 12223344444455
Q ss_pred HHhCC---CcEEEEEeChhHHHHHHHHHhCCC-----ceeeEEEeccccchhhh
Q 020064 108 QHLEI---PEWQVFGGSWGSTLALAYSLAHPD-----KVTGLVLRGIFLLRKKE 153 (331)
Q Consensus 108 ~~~~~---~~v~lvG~S~Gg~~a~~~a~~~p~-----~v~~li~~~~~~~~~~~ 153 (331)
+.++. ++++++|||+||.+++.+|..+|+ .+.+++..+++......
T Consensus 153 ~~~g~~~~~~v~l~G~S~GG~~al~~A~~~p~~~~~l~l~g~~~~~~p~dl~~~ 206 (377)
T 4ezi_A 153 NRLHYPISDKLYLAGYSEGGFSTIVMFEMLAKEYPDLPVSAVAPGSAPYGWEET 206 (377)
T ss_dssp HHTTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTTSCCCEEEEESCCCCHHHH
T ss_pred hccCCCCCCceEEEEECHHHHHHHHHHHHhhhhCCCCceEEEEecCcccCHHHH
Confidence 55554 689999999999999999987653 58888888887765443
|
| >3fcx_A FGH, esterase D, S-formylglutathione hydrolase; retinoblastoma, genetic marker, cytoplasm, cytoplasmic vesicle, polymorphism, serine esterase; 1.50A {Homo sapiens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.83 E-value=6.8e-20 Score=145.06 Aligned_cols=120 Identities=13% Similarity=0.089 Sum_probs=78.6
Q ss_pred CCCceEEEEeCCC-----CCCCcEEEeccCCCCCCCCC----cccccCCCCcEEEEecC--CCCCCCCCCC---------
Q 020064 30 SDIHTIYWEQSGN-----PTGHPVVFLHGGPGGGTTPS----NRRFFDPDFYRIILFDQ--RGAGKSTPHA--------- 89 (331)
Q Consensus 30 ~~g~~l~~~~~g~-----~~~~~vl~~HG~~~~~~~~~----~~~~~~~~g~~vi~~D~--~G~G~s~~~~--------- 89 (331)
..|..+.+..+-+ ...|+||++||++++...+. ....+.+.||.|+++|+ ||+|.+....
T Consensus 25 ~~~~~~~~~v~~P~~~~~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~~rG~~~~~~~~~~~~g~~~~ 104 (282)
T 3fcx_A 25 ELNCKMKFAVYLPPKAETGKCPALYWLSGLTCTEQNFISKSGYHQSASEHGLVVIAPDTSPRGCNIKGEDESWDFGTGAG 104 (282)
T ss_dssp TTTEEEEEEEEECGGGGTSCEEEEEEECCTTCCSHHHHHHSCCHHHHHHHTCEEEEECSCSSCCCC--------CCCCCC
T ss_pred hcCCeeEEEEEcCCCCCCCCCCEEEEEcCCCCCccchhhcchHHHHhhcCCeEEEEeccccCccccccccccccccCCcc
Confidence 3455565544322 23468999999776544322 23445568999999999 7666533110
Q ss_pred ----CCC-c-----cchHHHHHHHHHHHH-HhCC--CcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccc
Q 020064 90 ----CLD-Q-----NTTWDLIDDIEKLRQ-HLEI--PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLL 149 (331)
Q Consensus 90 ----~~~-~-----~~~~~~~~~~~~~~~-~~~~--~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~ 149 (331)
... . .......+++..+++ .++. ++++++||||||.+++.+|.++|+++++++++++...
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~~ 177 (282)
T 3fcx_A 105 FYVDATEDPWKTNYRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPICN 177 (282)
T ss_dssp TTCBCCSTTHHHHCBHHHHHHTHHHHHHHHHSSEEEEEEEEEEETHHHHHHHHHHHTSTTTSSCEEEESCCCC
T ss_pred cccccCcccccchhhHHHHHHHHHHHHHHHHcCCCccceEEEEECchHHHHHHHHHhCcccceEEEEeCCccC
Confidence 000 0 112334556666665 5543 6899999999999999999999999999999998654
|
| >3ls2_A S-formylglutathione hydrolase; psychrophilic organism; 2.20A {Pseudoalteromonas haloplanktis} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.82 E-value=1.4e-19 Score=143.10 Aligned_cols=120 Identities=14% Similarity=0.062 Sum_probs=80.6
Q ss_pred CCCceEEEEeCCCC------CCCcEEEeccCCCCCCCC----CcccccCCCCcEEEEecCCCCCCCCCCCCC--------
Q 020064 30 SDIHTIYWEQSGNP------TGHPVVFLHGGPGGGTTP----SNRRFFDPDFYRIILFDQRGAGKSTPHACL-------- 91 (331)
Q Consensus 30 ~~g~~l~~~~~g~~------~~~~vl~~HG~~~~~~~~----~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~-------- 91 (331)
..|..+.+..+-++ ..|+||++||++++...+ .....+.+.|+.|+++|.+++|.+......
T Consensus 24 ~~g~~~~~~v~~P~~~~~~~~~P~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~~~g~~~~~~~~~~~g~g~~ 103 (280)
T 3ls2_A 24 STHCTMRFAVFLPPGASESNKVPVLYWLSGLTCTDENFMQKAGAFKKAAELGIAIVAPDTSPRGDNVPNEDSYDFAQGAG 103 (280)
T ss_dssp TTTEEEEEEEEECTTCBTTBCEEEEEEECCTTCCSHHHHHHSCCHHHHHHHTCEEEECCSSCCSTTSCCCSCTTSSTTCC
T ss_pred hcCCceEEEEEcCCCCCCCCCcCEEEEeCCCCCChhhhhcchhHHHHHhhCCeEEEEeCCcccccccccccccccccCCc
Confidence 35656666544332 236899999977664332 123333446999999999877765322100
Q ss_pred -----------Cccc-hHHHHHHHHHHHHHh-CC-CcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccc
Q 020064 92 -----------DQNT-TWDLIDDIEKLRQHL-EI-PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLL 149 (331)
Q Consensus 92 -----------~~~~-~~~~~~~~~~~~~~~-~~-~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~ 149 (331)
.... ...+.+++..+++.. .. ++++++||||||.+++.++.++|+++++++++++...
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~G~S~GG~~a~~~a~~~p~~~~~~~~~s~~~~ 175 (280)
T 3ls2_A 104 FYVNATQAPYNTHFNMYDYVVNELPALIEQHFPVTSTKAISGHSMGGHGALMIALKNPQDYVSASAFSPIVN 175 (280)
T ss_dssp TTCBCCSTTTTTTCBHHHHHHTHHHHHHHHHSSEEEEEEEEEBTHHHHHHHHHHHHSTTTCSCEEEESCCSC
T ss_pred cccccccccccccccHHHHHHHHHHHHHHhhCCCCCCeEEEEECHHHHHHHHHHHhCchhheEEEEecCccC
Confidence 0012 334456666666554 32 6899999999999999999999999999999998654
|
| >2uz0_A Esterase, tributyrin esterase; alpha/beta hydrolase, hydrolase, A virulence facto LUNG infection; HET: MSE; 1.7A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=99.82 E-value=2.1e-19 Score=140.74 Aligned_cols=103 Identities=11% Similarity=0.040 Sum_probs=78.8
Q ss_pred CCCcEEEeccCCCCCCCC-C--cccccC-CCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHh------CCC
Q 020064 44 TGHPVVFLHGGPGGGTTP-S--NRRFFD-PDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHL------EIP 113 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~~~-~--~~~~~~-~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~------~~~ 113 (331)
+.|+||++||++++...+ . ....++ ..|+.|+.+|+++++.+.... .....+.+++++..+++.. +.+
T Consensus 40 ~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 117 (263)
T 2uz0_A 40 DIPVLYLLHGMSGNHNSWLKRTNVERLLRGTNLIVVMPNTSNGWYTDTQY--GFDYYTALAEELPQVLKRFFPNMTSKRE 117 (263)
T ss_dssp CBCEEEEECCTTCCTTHHHHHSCHHHHTTTCCCEEEECCCTTSTTSBCTT--SCBHHHHHHTHHHHHHHHHCTTBCCCGG
T ss_pred CCCEEEEECCCCCCHHHHHhccCHHHHHhcCCeEEEEECCCCCccccCCC--cccHHHHHHHHHHHHHHHHhccccCCCC
Confidence 357899999977664433 2 234443 479999999999988776543 1233567778888888774 236
Q ss_pred cEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccc
Q 020064 114 EWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLL 149 (331)
Q Consensus 114 ~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~ 149 (331)
+++++|||+||.+++.++. +|++++++|++++...
T Consensus 118 ~i~l~G~S~Gg~~a~~~a~-~~~~~~~~v~~~~~~~ 152 (263)
T 2uz0_A 118 KTFIAGLSMGGYGCFKLAL-TTNRFSHAASFSGALS 152 (263)
T ss_dssp GEEEEEETHHHHHHHHHHH-HHCCCSEEEEESCCCC
T ss_pred ceEEEEEChHHHHHHHHHh-CccccceEEEecCCcc
Confidence 8999999999999999999 9999999999998764
|
| >3d59_A Platelet-activating factor acetylhydrolase; secreted protein, alpha/beta-hydrolase-fold, LDL-bound, lipoprotein associated phospholipase A2, LP-PLA2; 1.50A {Homo sapiens} PDB: 3d5e_A 3f97_A* 3f98_A 3f9c_A* 3f96_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=1.8e-20 Score=154.59 Aligned_cols=103 Identities=11% Similarity=0.051 Sum_probs=73.1
Q ss_pred CCCcEEEeccCCCCC-CCCCcccccCCCCcEEEEecCCCCCCCCCCC---------------------CCCc-----cch
Q 020064 44 TGHPVVFLHGGPGGG-TTPSNRRFFDPDFYRIILFDQRGAGKSTPHA---------------------CLDQ-----NTT 96 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~-~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~---------------------~~~~-----~~~ 96 (331)
..|+||++||++++. .+..++..++++||.|+++|+||+|.|.... .... ..+
T Consensus 97 ~~P~Vv~~HG~~~~~~~~~~~a~~La~~Gy~V~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 176 (383)
T 3d59_A 97 KYPLVVFSHGLGAFRTLYSAIGIDLASHGFIVAAVEHRDRSASATYYFKDQSAAEIGDKSWLYLRTLKQEEETHIRNEQV 176 (383)
T ss_dssp CEEEEEEECCTTCCTTTTHHHHHHHHHTTCEEEEECCCSSCSSEEEECSSHHHHHHTCCEEEECCCCCHHHHHHHHHHHH
T ss_pred CCCEEEEcCCCCCCchHHHHHHHHHHhCceEEEEeccCCCCccceeecCCccccccCCceeeeccccCcccchhhhHHHH
Confidence 357799999976654 4455677777889999999999999875210 0000 112
Q ss_pred HHHHHHHHHHHHHh--------------------------CCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccc
Q 020064 97 WDLIDDIEKLRQHL--------------------------EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIF 147 (331)
Q Consensus 97 ~~~~~~~~~~~~~~--------------------------~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~ 147 (331)
+..++|+..+++.+ +.+++.++|||+||.+++.++...+ +++++|++++.
T Consensus 177 ~~~~~d~~~~l~~l~~~~~~~~~~~~~~~~~d~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~-~v~a~v~~~~~ 252 (383)
T 3d59_A 177 RQRAKECSQALSLILDIDHGKPVKNALDLKFDMEQLKDSIDREKIAVIGHSFGGATVIQTLSEDQ-RFRCGIALDAW 252 (383)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCCCSSCCSCCGGGGTTCEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEESCC
T ss_pred HHHHHHHHHHHHHHHHhhcCCccccccccccchhhhhccccccceeEEEEChhHHHHHHHHhhCC-CccEEEEeCCc
Confidence 22355666655443 2348999999999999999988766 69999999873
|
| >3d0k_A Putative poly(3-hydroxybutyrate) depolymerase LPQ; alpha-beta-alpha sandwich, structural genomics, PSI-2; 1.83A {Bordetella parapertussis 12822} | Back alignment and structure |
|---|
Probab=99.81 E-value=2.2e-19 Score=143.65 Aligned_cols=118 Identities=15% Similarity=0.068 Sum_probs=80.6
Q ss_pred CCCceEEEEeC---C-CCCCCcEEEeccCCCCCC-C-CCcccccCCCCcEEEEecCC------------CC--CCCCCCC
Q 020064 30 SDIHTIYWEQS---G-NPTGHPVVFLHGGPGGGT-T-PSNRRFFDPDFYRIILFDQR------------GA--GKSTPHA 89 (331)
Q Consensus 30 ~~g~~l~~~~~---g-~~~~~~vl~~HG~~~~~~-~-~~~~~~~~~~g~~vi~~D~~------------G~--G~s~~~~ 89 (331)
.+|.++.+..+ + .+..|+||++||++++.. + ..+...+.+.||.|+++|+| |+ |.|....
T Consensus 35 ~~~~~l~~~~~~P~~~~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~~~p~~~~~~~g~~~g~s~~~~ 114 (304)
T 3d0k_A 35 NADRPFTLNTYRPYGYTPDRPVVVVQHGVLRNGADYRDFWIPAADRHKLLIVAPTFSDEIWPGVESYNNGRAFTAAGNPR 114 (304)
T ss_dssp CTTCCEEEEEEECTTCCTTSCEEEEECCTTCCHHHHHHHTHHHHHHHTCEEEEEECCTTTSCHHHHTTTTTCBCTTSCBC
T ss_pred CCCceEEEEEEeCCCCCCCCcEEEEeCCCCCCHHHHHHHHHHHHHHCCcEEEEeCCccccCCCccccccCccccccCCCC
Confidence 45556665422 2 234678999999877643 3 23445555689999999999 65 6665432
Q ss_pred CCCccchHHHHHHHHHHHHHh--CCCcEEEEEeChhHHHHHHHHHhCCC-ceeeEEEeccc
Q 020064 90 CLDQNTTWDLIDDIEKLRQHL--EIPEWQVFGGSWGSTLALAYSLAHPD-KVTGLVLRGIF 147 (331)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~--~~~~v~lvG~S~Gg~~a~~~a~~~p~-~v~~li~~~~~ 147 (331)
......++++.+.+..+.+.. +.++++|+||||||.+++.++..+|+ +++++|+++++
T Consensus 115 ~~~~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~~vl~~~~ 175 (304)
T 3d0k_A 115 HVDGWTYALVARVLANIRAAEIADCEQVYLFGHSAGGQFVHRLMSSQPHAPFHAVTAANPG 175 (304)
T ss_dssp CGGGSTTHHHHHHHHHHHHTTSCCCSSEEEEEETHHHHHHHHHHHHSCSTTCSEEEEESCS
T ss_pred cccchHHHHHHHHHHHHHhccCCCCCcEEEEEeChHHHHHHHHHHHCCCCceEEEEEecCc
Confidence 112334445544455555543 45789999999999999999999995 79999988754
|
| >3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic residues, glycoprotein, hydrolase, lipid degradation, zymogen, disulf; HET: NAG BTB; 1.49A {Candida antarctica} PDB: 3icw_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=1e-19 Score=142.33 Aligned_cols=101 Identities=15% Similarity=-0.009 Sum_probs=83.2
Q ss_pred CCCcEEEeccCCCCC--CCC-CcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCcEEEEEe
Q 020064 44 TGHPVVFLHGGPGGG--TTP-SNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGG 120 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~--~~~-~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG~ 120 (331)
++++|||+||+.++. .|. .+...+.++||+|+++|+||||.++. ..+.+++++.+..+++..+.++++||||
T Consensus 64 ~~~pVVLvHG~~~~~~~~w~~~l~~~L~~~Gy~V~a~DlpG~G~~~~-----~~~~~~la~~I~~l~~~~g~~~v~LVGH 138 (316)
T 3icv_A 64 VSKPILLVPGTGTTGPQSFDSNWIPLSAQLGYTPCWISPPPFMLNDT-----QVNTEYMVNAITTLYAGSGNNKLPVLTW 138 (316)
T ss_dssp CSSEEEEECCTTCCHHHHHTTTHHHHHHHTTCEEEEECCTTTTCSCH-----HHHHHHHHHHHHHHHHHTTSCCEEEEEE
T ss_pred CCCeEEEECCCCCCcHHHHHHHHHHHHHHCCCeEEEecCCCCCCCcH-----HHHHHHHHHHHHHHHHHhCCCceEEEEE
Confidence 567899999987764 343 56677767899999999999997642 3356778888888888999999999999
Q ss_pred ChhHHHHHHHHHhC---CCceeeEEEeccccc
Q 020064 121 SWGSTLALAYSLAH---PDKVTGLVLRGIFLL 149 (331)
Q Consensus 121 S~Gg~~a~~~a~~~---p~~v~~li~~~~~~~ 149 (331)
||||.++..++..+ +++|+++|+++++..
T Consensus 139 SmGGlvA~~al~~~p~~~~~V~~lV~lapp~~ 170 (316)
T 3icv_A 139 SQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYK 170 (316)
T ss_dssp THHHHHHHHHHHHCGGGTTTEEEEEEESCCTT
T ss_pred CHHHHHHHHHHHhccccchhhceEEEECCCCC
Confidence 99999998777765 589999999998754
|
| >4b6g_A Putative esterase; hydrolase, formaldehyde detoxification, alpha/beta serine HY; 1.40A {Neisseria meningitidis MC58} | Back alignment and structure |
|---|
Probab=99.80 E-value=2.4e-19 Score=141.98 Aligned_cols=120 Identities=12% Similarity=0.096 Sum_probs=79.4
Q ss_pred CCCceEEEEeCCCC-----CCCcEEEeccCCCCCCCC----CcccccCCCCcEEEEecCCCCCCCCCC------------
Q 020064 30 SDIHTIYWEQSGNP-----TGHPVVFLHGGPGGGTTP----SNRRFFDPDFYRIILFDQRGAGKSTPH------------ 88 (331)
Q Consensus 30 ~~g~~l~~~~~g~~-----~~~~vl~~HG~~~~~~~~----~~~~~~~~~g~~vi~~D~~G~G~s~~~------------ 88 (331)
..|..+.+..+-++ ..|+||++||++++...+ .....+.+.|+.|+++|.+++|.+...
T Consensus 31 ~~~~~~~~~v~~P~~~~~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~~rg~~~~~~~~~~~G~g~~~ 110 (283)
T 4b6g_A 31 TLQCEMKFAVYLPNNPENRPLGVIYWLSGLTCTEQNFITKSGFQRYAAEHQVIVVAPDTSPRGEQVPNDDAYDLGQSAGF 110 (283)
T ss_dssp TTTEEEEEEEEECCCTTCCCEEEEEEECCTTCCSHHHHHHSCTHHHHHHHTCEEEEECSSCCSTTSCCCSSTTSBTTBCT
T ss_pred hhCCceEEEEEeCCCCCCCCCCEEEEEcCCCCCccchhhcccHHHHHhhCCeEEEEeccccccccccccccccccCCCcc
Confidence 34556655544322 346899999977654332 223334457999999998744432111
Q ss_pred --CCC-----Cccc-hHHHHHHHHHHHHHh--CCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccc
Q 020064 89 --ACL-----DQNT-TWDLIDDIEKLRQHL--EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLL 149 (331)
Q Consensus 89 --~~~-----~~~~-~~~~~~~~~~~~~~~--~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~ 149 (331)
... .... ...+++++..+++.. ..++++|+||||||.+++.++.++|+++++++++++...
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~G~S~GG~~a~~~a~~~p~~~~~~~~~s~~~~ 181 (283)
T 4b6g_A 111 YLNATEQPWAANYQMYDYILNELPRLIEKHFPTNGKRSIMGHSMGGHGALVLALRNQERYQSVSAFSPILS 181 (283)
T ss_dssp TSBCCSTTGGGTCBHHHHHHTHHHHHHHHHSCEEEEEEEEEETHHHHHHHHHHHHHGGGCSCEEEESCCCC
T ss_pred cccCccCcccchhhHHHHHHHHHHHHHHHhCCCCCCeEEEEEChhHHHHHHHHHhCCccceeEEEECCccc
Confidence 000 0112 334466777777765 236899999999999999999999999999999998654
|
| >2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39 | Back alignment and structure |
|---|
Probab=99.80 E-value=9.6e-19 Score=121.43 Aligned_cols=99 Identities=17% Similarity=0.225 Sum_probs=80.9
Q ss_pred ceeEeCCCceEEEEeCCCCCCCcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHH
Q 020064 25 GILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIE 104 (331)
Q Consensus 25 ~~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~ 104 (331)
.+++. +|.+++|...| ++|+||++| .+...|... +.++|+|+++|+||||.|..... . .+++++++.
T Consensus 5 ~~~~~-~g~~~~~~~~g--~~~~vv~~H--~~~~~~~~~----l~~~~~v~~~d~~G~G~s~~~~~---~-~~~~~~~~~ 71 (131)
T 2dst_A 5 GYLHL-YGLNLVFDRVG--KGPPVLLVA--EEASRWPEA----LPEGYAFYLLDLPGYGRTEGPRM---A-PEELAHFVA 71 (131)
T ss_dssp EEEEE-TTEEEEEEEEC--CSSEEEEES--SSGGGCCSC----CCTTSEEEEECCTTSTTCCCCCC---C-HHHHHHHHH
T ss_pred EEEEE-CCEEEEEEEcC--CCCeEEEEc--CCHHHHHHH----HhCCcEEEEECCCCCCCCCCCCC---C-HHHHHHHHH
Confidence 34444 56699999888 478999999 222333333 45669999999999999987652 2 899999999
Q ss_pred HHHHHhCCCcEEEEEeChhHHHHHHHHHhCCC
Q 020064 105 KLRQHLEIPEWQVFGGSWGSTLALAYSLAHPD 136 (331)
Q Consensus 105 ~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~ 136 (331)
++++.++.++++++||||||.+++.+|.++|.
T Consensus 72 ~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~ 103 (131)
T 2dst_A 72 GFAVMMNLGAPWVLLRGLGLALGPHLEALGLR 103 (131)
T ss_dssp HHHHHTTCCSCEEEECGGGGGGHHHHHHTTCC
T ss_pred HHHHHcCCCccEEEEEChHHHHHHHHHhcCCc
Confidence 99999999999999999999999999999984
|
| >1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A | Back alignment and structure |
|---|
Probab=99.79 E-value=2.1e-21 Score=161.23 Aligned_cols=105 Identities=15% Similarity=0.036 Sum_probs=84.0
Q ss_pred CCCCcEEEeccCCCCC-C-CCC-cccccCC-CCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHh----C--C
Q 020064 43 PTGHPVVFLHGGPGGG-T-TPS-NRRFFDP-DFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHL----E--I 112 (331)
Q Consensus 43 ~~~~~vl~~HG~~~~~-~-~~~-~~~~~~~-~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~----~--~ 112 (331)
+++|+||++||++++. . |.. ....+.+ .+|+|+++|+||+|.|.... ...+.+.+++|+.++++.+ + .
T Consensus 68 ~~~~~vvllHG~~~s~~~~w~~~~~~~l~~~~~~~Vi~~D~~g~g~s~~~~--~~~~~~~~~~dl~~~i~~l~~~~g~~~ 145 (432)
T 1gpl_A 68 LNRKTRFIIHGFTDSGENSWLSDMCKNMFQVEKVNCICVDWKGGSKAQYSQ--ASQNIRVVGAEVAYLVQVLSTSLNYAP 145 (432)
T ss_dssp TTSEEEEEECCTTCCTTSHHHHHHHHHHHHHCCEEEEEEECHHHHTSCHHH--HHHHHHHHHHHHHHHHHHHHHHHCCCG
T ss_pred CCCCeEEEECCCCCCCCchHHHHHHHHHHhcCCcEEEEEECccccCccchh--hHhhHHHHHHHHHHHHHHHHHhcCCCc
Confidence 4678999999987765 2 333 4455554 69999999999999987332 2345677888888888776 4 6
Q ss_pred CcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccc
Q 020064 113 PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLL 149 (331)
Q Consensus 113 ~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~ 149 (331)
++++|+||||||.+|+.+|.++|+++++++++++...
T Consensus 146 ~~i~lvGhSlGg~vA~~~a~~~p~~v~~iv~l~pa~p 182 (432)
T 1gpl_A 146 ENVHIIGHSLGAHTAGEAGKRLNGLVGRITGLDPAEP 182 (432)
T ss_dssp GGEEEEEETHHHHHHHHHHHTTTTCSSEEEEESCBCT
T ss_pred ccEEEEEeCHHHHHHHHHHHhcccccceeEEeccccc
Confidence 7999999999999999999999999999999988543
|
| >1jjf_A Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-xylan; feruloyl esterase, ferulic acid esterase, FAE_XYNZ, XYNZ, structural genomics; 1.75A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1jt2_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=5.5e-18 Score=132.99 Aligned_cols=116 Identities=16% Similarity=0.048 Sum_probs=76.0
Q ss_pred CCceEEEEeCCC------CCCCcEEEeccCCCCCC-CCCc-------ccccCC----CCcEEEEecCCCCCCCCCCCCCC
Q 020064 31 DIHTIYWEQSGN------PTGHPVVFLHGGPGGGT-TPSN-------RRFFDP----DFYRIILFDQRGAGKSTPHACLD 92 (331)
Q Consensus 31 ~g~~l~~~~~g~------~~~~~vl~~HG~~~~~~-~~~~-------~~~~~~----~g~~vi~~D~~G~G~s~~~~~~~ 92 (331)
+|..+.+..+-+ ...|+||++||++++.. |... ...+.+ .+|.|+++|+++++.+.... .
T Consensus 42 ~~~~~~~~v~~P~~~~~~~~~P~vv~lHG~g~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~vv~~d~~~~~~~~~~~--~ 119 (268)
T 1jjf_A 42 TNSTRPARVYLPPGYSKDKKYSVLYLLHGIGGSENDWFEGGGRANVIADNLIAEGKIKPLIIVTPNTNAAGPGIADG--Y 119 (268)
T ss_dssp TTEEEEEEEEECTTCCTTSCBCEEEEECCTTCCTTTTTTTTTCHHHHHHHHHHTTSSCCCEEEEECCCCCCTTCSCH--H
T ss_pred cCCceEEEEEeCCCCCCCCCccEEEEECCCCCCcchhhhccccHHHHHHHHHHcCCCCCEEEEEeCCCCCCcccccc--H
Confidence 454555544322 23478999999776543 3222 233333 36999999999987643111 0
Q ss_pred ccchHHHHHHHHHHHH-HhCC----CcEEEEEeChhHHHHHHHHHhCCCceeeEEEecccc
Q 020064 93 QNTTWDLIDDIEKLRQ-HLEI----PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFL 148 (331)
Q Consensus 93 ~~~~~~~~~~~~~~~~-~~~~----~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~ 148 (331)
....+++++++..+++ .++. ++++++|||+||.+++.++.++|+++++++++++..
T Consensus 120 ~~~~~~~~~~~~~~l~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~ 180 (268)
T 1jjf_A 120 ENFTKDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDKFAYIGPISAAP 180 (268)
T ss_dssp HHHHHHHHHTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTCTTTCSEEEEESCCT
T ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCCceEEEEECHHHHHHHHHHHhCchhhhheEEeCCCC
Confidence 0112233555555554 3443 689999999999999999999999999999998753
|
| >1r88_A MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBPC1, immune system; 1.71A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=99.77 E-value=1.6e-17 Score=130.87 Aligned_cols=126 Identities=12% Similarity=-0.040 Sum_probs=84.5
Q ss_pred CccceeEeC-CCceEEEEeCCCCCCCcEEEeccCC--CCCCCCC----cccccCCCCcEEEEecCCCCC-CCCCCCCCCc
Q 020064 22 YSTGILKVS-DIHTIYWEQSGNPTGHPVVFLHGGP--GGGTTPS----NRRFFDPDFYRIILFDQRGAG-KSTPHACLDQ 93 (331)
Q Consensus 22 ~~~~~~~~~-~g~~l~~~~~g~~~~~~vl~~HG~~--~~~~~~~----~~~~~~~~g~~vi~~D~~G~G-~s~~~~~~~~ 93 (331)
.+...+... .|..+.+. .-+++.|+||++||++ ++...|. ....+.+.|+.|+++|.++.+ .++.... ..
T Consensus 11 ~~~~~~~S~~~~~~~~~~-~~P~~~p~vvllHG~~~~~~~~~w~~~~~~~~~~~~~~~~vv~pd~~~~~~~~~~~~~-~~ 88 (280)
T 1r88_A 11 YENLMVPSPSMGRDIPVA-FLAGGPHAVYLLDAFNAGPDVSNWVTAGNAMNTLAGKGISVVAPAGGAYSMYTNWEQD-GS 88 (280)
T ss_dssp CEEEEEEETTTTEEEEEE-EECCSSSEEEEECCSSCCSSSCHHHHTSCHHHHHTTSSSEEEEECCCTTSTTSBCSSC-TT
T ss_pred EEEEEEECcccCCcceEE-EeCCCCCEEEEECCCCCCCChhhhhhcccHHHHHhcCCeEEEEECCCCCCccCCCCCC-CC
Confidence 344455543 56566655 3222347899999974 2322221 234456689999999997642 2221111 11
Q ss_pred cch-HHHHHHHHHHHHH-hCCC--cEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccc
Q 020064 94 NTT-WDLIDDIEKLRQH-LEIP--EWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLL 149 (331)
Q Consensus 94 ~~~-~~~~~~~~~~~~~-~~~~--~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~ 149 (331)
..+ ..+++++..+++. ++.+ +++|+||||||.+++.+|.++|+++++++++++...
T Consensus 89 ~~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~ 148 (280)
T 1r88_A 89 KQWDTFLSAELPDWLAANRGLAPGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGFLY 148 (280)
T ss_dssp CBHHHHHHTHHHHHHHHHSCCCSSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCC
T ss_pred CcHHHHHHHHHHHHHHHHCCCCCCceEEEEECHHHHHHHHHHHhCccceeEEEEECCccC
Confidence 133 3456788888877 6764 899999999999999999999999999999998654
|
| >2zyr_A Lipase, putative; fatty acid, hydrolase; HET: 1PE; 1.77A {Archaeoglobus fulgidus} PDB: 2zys_A* 2zyi_A* 2zyh_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=8.9e-20 Score=149.98 Aligned_cols=110 Identities=22% Similarity=0.199 Sum_probs=83.6
Q ss_pred eCCCCCCCcEEEeccCCCCCC-CCCcccccCCCCc---EEEEecCCCCCCC-----CCCC--------------------
Q 020064 39 QSGNPTGHPVVFLHGGPGGGT-TPSNRRFFDPDFY---RIILFDQRGAGKS-----TPHA-------------------- 89 (331)
Q Consensus 39 ~~g~~~~~~vl~~HG~~~~~~-~~~~~~~~~~~g~---~vi~~D~~G~G~s-----~~~~-------------------- 89 (331)
..+++++++|||+||++++.. |..++..+.++|| +|+++|++|||.| +...
T Consensus 16 ~~g~~~~ppVVLlHG~g~s~~~w~~la~~La~~Gy~~~~Via~DlpG~G~S~~~~~Dv~~~G~~~~~G~n~~p~id~~~l 95 (484)
T 2zyr_A 16 VAAAEDFRPVVFVHGLAGSAGQFESQGMRFAANGYPAEYVKTFEYDTISWALVVETDMLFSGLGSEFGLNISQIIDPETL 95 (484)
T ss_dssp -----CCCCEEEECCTTCCGGGGHHHHHHHHHTTCCGGGEEEECCCHHHHHHHTTTSTTTTTGGGHHHHHHGGGSCHHHH
T ss_pred ccCCCCCCEEEEECCCCCCHHHHHHHHHHHHHcCCCcceEEEEECCCCCccccccccccccccccccccccccccccccc
Confidence 334456789999999776644 4556666767899 7999999999976 1000
Q ss_pred ---------CCCccchHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCC---CceeeEEEecccc
Q 020064 90 ---------CLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHP---DKVTGLVLRGIFL 148 (331)
Q Consensus 90 ---------~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p---~~v~~li~~~~~~ 148 (331)
.....+.+++++++..+++.++.++++++||||||.+++.++.++| ++++++|+++++.
T Consensus 96 ~~v~~~~~~~~~~~~~~dla~~L~~ll~~lg~~kV~LVGHSmGG~IAl~~A~~~Pe~~~~V~~LVlIapp~ 166 (484)
T 2zyr_A 96 DKILSKSRERLIDETFSRLDRVIDEALAESGADKVDLVGHSMGTFFLVRYVNSSPERAAKVAHLILLDGVW 166 (484)
T ss_dssp HHHHTSCHHHHHHHHHHHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHTCHHHHHTEEEEEEESCCC
T ss_pred cccccccccCchhhhHHHHHHHHHHHHHHhCCCCEEEEEECHHHHHHHHHHHHCccchhhhCEEEEECCcc
Confidence 0012456677888888899999999999999999999999999998 4899999999753
|
| >1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E | Back alignment and structure |
|---|
Probab=99.75 E-value=4.9e-18 Score=135.25 Aligned_cols=104 Identities=13% Similarity=0.101 Sum_probs=89.4
Q ss_pred CCCcEEEeccCCCCC-------CCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCcEE
Q 020064 44 TGHPVVFLHGGPGGG-------TTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQ 116 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~-------~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 116 (331)
++++|||+||+.++. .|..+...+.++||+|+++|+||+|.|..+ ..+.+++++++.++++.++.++++
T Consensus 7 ~~~~vVlvHG~~~~~~~~~~~~~w~~l~~~L~~~G~~V~~~d~~g~g~s~~~----~~~~~~l~~~i~~~l~~~~~~~v~ 82 (320)
T 1ys1_X 7 TRYPIILVHGLTGTDKYAGVLEYWYGIQEDLQQRGATVYVANLSGFQSDDGP----NGRGEQLLAYVKTVLAATGATKVN 82 (320)
T ss_dssp CSSCEEEECCTTCCSEETTTEESSTTHHHHHHHTTCCEEECCCCSSCCSSST----TSHHHHHHHHHHHHHHHHCCSCEE
T ss_pred CCCEEEEECCCCCCccccchHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCC----CCCHHHHHHHHHHHHHHhCCCCEE
Confidence 678999999976554 345566666678999999999999999654 357889999999999999999999
Q ss_pred EEEeChhHHHHHHHHHhCCCceeeEEEeccccchh
Q 020064 117 VFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRK 151 (331)
Q Consensus 117 lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~ 151 (331)
++||||||.++..++..+|++|+++|+++++....
T Consensus 83 lvGHS~GG~va~~~a~~~p~~V~~lV~i~~p~~G~ 117 (320)
T 1ys1_X 83 LVGHSQGGLTSRYVAAVAPDLVASVTTIGTPHRGS 117 (320)
T ss_dssp EEEETHHHHHHHHHHHHCGGGEEEEEEESCCTTCC
T ss_pred EEEECHhHHHHHHHHHhChhhceEEEEECCCCCCc
Confidence 99999999999999999999999999999865443
|
| >1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP: b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=1.8e-19 Score=149.98 Aligned_cols=106 Identities=14% Similarity=-0.005 Sum_probs=85.7
Q ss_pred CCCCCcEEEeccCCCCC-CCCC--cccccCC-CCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHh----CC-
Q 020064 42 NPTGHPVVFLHGGPGGG-TTPS--NRRFFDP-DFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHL----EI- 112 (331)
Q Consensus 42 ~~~~~~vl~~HG~~~~~-~~~~--~~~~~~~-~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~----~~- 112 (331)
++++|+||++||++++. ..|. .+..+++ .+|+|+++|+||+|.|.... ...+...+++|+.++++.+ +.
T Consensus 67 ~~~~p~vvliHG~~~~~~~~w~~~l~~~l~~~~~~~Vi~~D~~G~G~S~~~~--~~~~~~~~~~dl~~li~~L~~~~g~~ 144 (452)
T 1bu8_A 67 QLDRKTRFIVHGFIDKGEDGWLLDMCKKMFQVEKVNCICVDWRRGSRTEYTQ--ASYNTRVVGAEIAFLVQVLSTEMGYS 144 (452)
T ss_dssp CTTSEEEEEECCSCCTTCTTHHHHHHHHHHTTCCEEEEEEECHHHHSSCHHH--HHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred CCCCCeEEEECCCCCCCCchHHHHHHHHHHhhCCCEEEEEechhcccCchhH--hHhhHHHHHHHHHHHHHHHHHhcCCC
Confidence 34678999999987765 3332 3455554 49999999999999997332 2356678889999998888 54
Q ss_pred -CcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccc
Q 020064 113 -PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLL 149 (331)
Q Consensus 113 -~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~ 149 (331)
++++|+||||||.+|+.+|.++|++++++|+++|+.+
T Consensus 145 ~~~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~p 182 (452)
T 1bu8_A 145 PENVHLIGHSLGAHVVGEAGRRLEGHVGRITGLDPAEP 182 (452)
T ss_dssp GGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCT
T ss_pred ccceEEEEEChhHHHHHHHHHhcccccceEEEecCCcc
Confidence 7999999999999999999999999999999998654
|
| >1ex9_A Lactonizing lipase; alpha-beta hydrolase fold, phosphonate inhibitor; HET: OCP; 2.54A {Pseudomonas aeruginosa} SCOP: c.69.1.18 | Back alignment and structure |
|---|
Probab=99.73 E-value=6.8e-18 Score=132.92 Aligned_cols=101 Identities=17% Similarity=0.121 Sum_probs=87.2
Q ss_pred CCCcEEEeccCCCCC------CCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCcEEE
Q 020064 44 TGHPVVFLHGGPGGG------TTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQV 117 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~------~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l 117 (331)
++|+|||+||+.++. .|..+...+.++||+|+++|+||+|.+. .+.+++++++.++++.++.+++++
T Consensus 6 ~~~~vvlvHG~~~~~~~~~~~~~~~~~~~L~~~G~~v~~~d~~g~g~s~-------~~~~~~~~~i~~~~~~~~~~~v~l 78 (285)
T 1ex9_A 6 TKYPIVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQLDTSE-------VRGEQLLQQVEEIVALSGQPKVNL 78 (285)
T ss_dssp CSSCEEEECCTTCCSEETTEESSTTHHHHHHHTTCCEEEECCCSSSCHH-------HHHHHHHHHHHHHHHHHCCSCEEE
T ss_pred CCCeEEEeCCCCCCccccccccHHHHHHHHHhCCCEEEEEeCCCCCCch-------hhHHHHHHHHHHHHHHhCCCCEEE
Confidence 578999999976653 4555666676789999999999999874 467899999999999999899999
Q ss_pred EEeChhHHHHHHHHHhCCCceeeEEEeccccchh
Q 020064 118 FGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRK 151 (331)
Q Consensus 118 vG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~ 151 (331)
+||||||.++..++..+|++|+++|+++++....
T Consensus 79 vGhS~GG~~a~~~a~~~p~~v~~lv~i~~p~~g~ 112 (285)
T 1ex9_A 79 IGHSHGGPTIRYVAAVRPDLIASATSVGAPHKGS 112 (285)
T ss_dssp EEETTHHHHHHHHHHHCGGGEEEEEEESCCTTCC
T ss_pred EEECHhHHHHHHHHHhChhheeEEEEECCCCCCc
Confidence 9999999999999999999999999999865443
|
| >1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll, selenomethionine; 1.90A {Xanthomonas citri} SCOP: b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.73 E-value=2.6e-16 Score=136.93 Aligned_cols=127 Identities=12% Similarity=-0.036 Sum_probs=86.8
Q ss_pred ccceeEeCCCceEEEEeCCCC---CCCcEEEeccCCCCC---CCC------Ccc---cccCCCCcEEEEecCCCCCCCCC
Q 020064 23 STGILKVSDIHTIYWEQSGNP---TGHPVVFLHGGPGGG---TTP------SNR---RFFDPDFYRIILFDQRGAGKSTP 87 (331)
Q Consensus 23 ~~~~~~~~~g~~l~~~~~g~~---~~~~vl~~HG~~~~~---~~~------~~~---~~~~~~g~~vi~~D~~G~G~s~~ 87 (331)
+...+...||.+|++..+.+. ..|+||++||++... .+. ... ..++++||.|+++|+||+|.|..
T Consensus 26 ~~v~i~~~DG~~L~~~~~~P~~~~~~P~vl~~hgyg~~~~~~~~~~~~~~~~~~~~~~~la~~Gy~Vv~~D~RG~g~S~g 105 (615)
T 1mpx_A 26 REVMIPMRDGVKLHTVIVLPKGAKNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQDVRGKYGSEG 105 (615)
T ss_dssp EEEEEECTTSCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTCCS
T ss_pred EEEEEECCCCCEEEEEEEeCCCCCCeeEEEEEcCCCCccccccccccccccccchhHHHHHhCCeEEEEECCCCCCCCCC
Confidence 344567789988887655432 236788889965431 111 122 56778999999999999999986
Q ss_pred CCCCCc-----cch--HHHHHHHHHHHHHhC------CCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccc
Q 020064 88 HACLDQ-----NTT--WDLIDDIEKLRQHLE------IPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLL 149 (331)
Q Consensus 88 ~~~~~~-----~~~--~~~~~~~~~~~~~~~------~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~ 149 (331)
...... +.. ...++|+.++++.+. ..+|.++|||+||.+++.+|..+|++++++|.+++...
T Consensus 106 ~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~~~rv~l~G~S~GG~~al~~a~~~~~~l~a~v~~~~~~d 180 (615)
T 1mpx_A 106 DYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALTNPHPALKVAVPESPMID 180 (615)
T ss_dssp CCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTSCCTTEEEEEEESCCCC
T ss_pred ccccccccccccccccccHHHHHHHHHHHHHhcCCCCCCeEEEEecCHHHHHHHHHhhcCCCceEEEEecCCccc
Confidence 532110 010 033445544444432 13899999999999999999989999999999998765
|
| >1dqz_A 85C, protein (antigen 85-C); fibronectin, structural genomics, PSI, protein structure initiative, TB structural genomics consortium; 1.50A {Mycobacterium tuberculosis} SCOP: c.69.1.3 PDB: 3hrh_A 1dqy_A 1va5_A* 1f0n_A* 1f0p_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=7.4e-17 Score=127.29 Aligned_cols=118 Identities=14% Similarity=-0.049 Sum_probs=80.8
Q ss_pred CCceEEEEeCCCCCCCcEEEeccCCC--CCCCCC-c---ccccCCCCcEEEEecCCCC-CCCCCCC-CC-----CccchH
Q 020064 31 DIHTIYWEQSGNPTGHPVVFLHGGPG--GGTTPS-N---RRFFDPDFYRIILFDQRGA-GKSTPHA-CL-----DQNTTW 97 (331)
Q Consensus 31 ~g~~l~~~~~g~~~~~~vl~~HG~~~--~~~~~~-~---~~~~~~~g~~vi~~D~~G~-G~s~~~~-~~-----~~~~~~ 97 (331)
.+.++.+...+.. +++||++||+++ +...|. . ...+.+.++.|+++|.+|. +.+.... .. ...+++
T Consensus 16 ~~~~~~v~~~p~~-~~~v~llHG~~~~~~~~~w~~~~~~~~~l~~~~~~vv~pd~~~~~~~~~~~~~~~~~g~~~~~~~~ 94 (280)
T 1dqz_A 16 MGRDIKVQFQGGG-PHAVYLLDGLRAQDDYNGWDINTPAFEEYYQSGLSVIMPVGGQSSFYTDWYQPSQSNGQNYTYKWE 94 (280)
T ss_dssp TTEEEEEEEECCS-SSEEEECCCTTCCSSSCHHHHHSCHHHHHTTSSSEEEEECCCTTCTTSBCSSSCTTTTCCSCCBHH
T ss_pred cCceeEEEEcCCC-CCEEEEECCCCCCCCcccccccCcHHHHHhcCCeEEEEECCCCCccccCCCCCCccccccccccHH
Confidence 3455655543322 468999999753 433222 2 2335567899999998754 2222111 00 134555
Q ss_pred H-HHHHHHHHHHH-hCCC--cEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccc
Q 020064 98 D-LIDDIEKLRQH-LEIP--EWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLL 149 (331)
Q Consensus 98 ~-~~~~~~~~~~~-~~~~--~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~ 149 (331)
+ +++++..+++. ++.+ +++|+||||||.+++.++.++|+++++++++++...
T Consensus 95 ~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~ 150 (280)
T 1dqz_A 95 TFLTREMPAWLQANKGVSPTGNAAVGLSMSGGSALILAAYYPQQFPYAASLSGFLN 150 (280)
T ss_dssp HHHHTHHHHHHHHHHCCCSSSCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCC
T ss_pred HHHHHHHHHHHHHHcCCCCCceEEEEECHHHHHHHHHHHhCCchheEEEEecCccc
Confidence 5 45788888887 7764 899999999999999999999999999999998654
|
| >3i2k_A Cocaine esterase; alpha/beta hydrolase, hydrolase; HET: DBC GOL; 1.51A {Rhodococcus SP} PDB: 3i2j_A* 3puh_A 3i2h_A* 3i2i_A* 3i2g_A* 3ida_A* 3i2f_A* 3pui_A 1ju3_A 1ju4_A 1l7q_A 1l7r_A | Back alignment and structure |
|---|
Probab=99.73 E-value=5.7e-17 Score=140.05 Aligned_cols=120 Identities=13% Similarity=-0.012 Sum_probs=90.2
Q ss_pred cceeEeCCCceEEEEeCCC---CCCCcEEEeccCCCCCC----CCCcc-cccCCCCcEEEEecCCCCCCCCCCCCCCccc
Q 020064 24 TGILKVSDIHTIYWEQSGN---PTGHPVVFLHGGPGGGT----TPSNR-RFFDPDFYRIILFDQRGAGKSTPHACLDQNT 95 (331)
Q Consensus 24 ~~~~~~~~g~~l~~~~~g~---~~~~~vl~~HG~~~~~~----~~~~~-~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~ 95 (331)
...+++.||.+|++..+.+ ...|+||++||++.... +.... ..++++||.|+++|+||+|.|......
T Consensus 11 ~v~i~~~DG~~L~~~~~~P~~~~~~P~vv~~~~~g~~~~~~~~y~~~~~~~la~~Gy~vv~~D~RG~G~S~g~~~~---- 86 (587)
T 3i2k_A 11 NVMVPMRDGVRLAVDLYRPDADGPVPVLLVRNPYDKFDVFAWSTQSTNWLEFVRDGYAVVIQDTRGLFASEGEFVP---- 86 (587)
T ss_dssp EEEEECTTSCEEEEEEEEECCSSCEEEEEEEESSCTTCHHHHHTTTCCTHHHHHTTCEEEEEECTTSTTCCSCCCT----
T ss_pred EEEEECCCCCEEEEEEEECCCCCCeeEEEEECCcCCCccccccchhhHHHHHHHCCCEEEEEcCCCCCCCCCcccc----
Confidence 4567888998888765432 23467888888655432 22234 677789999999999999999865421
Q ss_pred hHHHHHHHHHHHHHhC-----CCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccc
Q 020064 96 TWDLIDDIEKLRQHLE-----IPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIF 147 (331)
Q Consensus 96 ~~~~~~~~~~~~~~~~-----~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~ 147 (331)
+....+|+.++++.+. ..+|.++|+||||.+++.+|..+|+.++++|.+++.
T Consensus 87 ~~~~~~D~~~~i~~l~~~~~~~~~v~l~G~S~GG~~a~~~a~~~~~~l~a~v~~~~~ 143 (587)
T 3i2k_A 87 HVDDEADAEDTLSWILEQAWCDGNVGMFGVSYLGVTQWQAAVSGVGGLKAIAPSMAS 143 (587)
T ss_dssp TTTHHHHHHHHHHHHHHSTTEEEEEEECEETHHHHHHHHHHTTCCTTEEEBCEESCC
T ss_pred ccchhHHHHHHHHHHHhCCCCCCeEEEEeeCHHHHHHHHHHhhCCCccEEEEEeCCc
Confidence 2345666666666653 258999999999999999999999999999999886
|
| >1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET: DDQ; 2.99A {Equus caballus} | Back alignment and structure |
|---|
Probab=99.72 E-value=2e-18 Score=143.66 Aligned_cols=105 Identities=14% Similarity=0.011 Sum_probs=85.3
Q ss_pred CCCCcEEEeccCCCCC-CCC-C-cccccCC-CCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHh----C--C
Q 020064 43 PTGHPVVFLHGGPGGG-TTP-S-NRRFFDP-DFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHL----E--I 112 (331)
Q Consensus 43 ~~~~~vl~~HG~~~~~-~~~-~-~~~~~~~-~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~----~--~ 112 (331)
+++|+||++||+.++. ..| . .+..+++ .||+|+++|++|+|.|.... ...+.+.+++|+.++++.+ + .
T Consensus 68 ~~~p~vvliHG~~~~~~~~w~~~~~~~l~~~~~~~Vi~~D~~g~G~S~~~~--~~~~~~~~~~dl~~~i~~L~~~~g~~~ 145 (452)
T 1w52_X 68 SSRKTHFVIHGFRDRGEDSWPSDMCKKILQVETTNCISVDWSSGAKAEYTQ--AVQNIRIVGAETAYLIQQLLTELSYNP 145 (452)
T ss_dssp TTSCEEEEECCTTCCSSSSHHHHHHHHHHTTSCCEEEEEECHHHHTSCHHH--HHHHHHHHHHHHHHHHHHHHHHHCCCG
T ss_pred CCCCEEEEEcCCCCCCCchHHHHHHHHHHhhCCCEEEEEecccccccccHH--HHHhHHHHHHHHHHHHHHHHHhcCCCc
Confidence 4678999999987765 333 2 3455554 49999999999999987332 2356678888998888887 5 6
Q ss_pred CcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccc
Q 020064 113 PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLL 149 (331)
Q Consensus 113 ~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~ 149 (331)
++++|+||||||.+|+.+|.++|++++++|+++|+.+
T Consensus 146 ~~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~p 182 (452)
T 1w52_X 146 ENVHIIGHSLGAHTAGEAGRRLEGRVGRVTGLDPAEP 182 (452)
T ss_dssp GGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCT
T ss_pred ccEEEEEeCHHHHHHHHHHHhcccceeeEEecccccc
Confidence 7999999999999999999999999999999998654
|
| >1sfr_A Antigen 85-A; alpha/beta hydrolase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 2.70A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=99.72 E-value=7.6e-17 Score=128.61 Aligned_cols=129 Identities=12% Similarity=-0.017 Sum_probs=84.7
Q ss_pred CCccceeEeC-CCceEEEEeCCC-CCCCcEEEeccCC--CCCCCCC----cccccCCCCcEEEEecCCCC-CCCCCCCCC
Q 020064 21 PYSTGILKVS-DIHTIYWEQSGN-PTGHPVVFLHGGP--GGGTTPS----NRRFFDPDFYRIILFDQRGA-GKSTPHACL 91 (331)
Q Consensus 21 ~~~~~~~~~~-~g~~l~~~~~g~-~~~~~vl~~HG~~--~~~~~~~----~~~~~~~~g~~vi~~D~~G~-G~s~~~~~~ 91 (331)
..+...+... .+.++.+..... ...|+||++||++ ++...|. ....+.+.++.|+++|.++. +.++.....
T Consensus 8 ~v~~~~~~S~~~~~~i~v~~~p~~~~~p~vvllHG~~~~~~~~~w~~~~~~~~~~~~~~~~vv~p~~~~~~~~~~~~~~~ 87 (304)
T 1sfr_A 8 PVEYLQVPSPSMGRDIKVQFQSGGANSPALYLLDGLRAQDDFSGWDINTPAFEWYDQSGLSVVMPVGGQSSFYSDWYQPA 87 (304)
T ss_dssp CCEEEEEEETTTTEEEEEEEECCSTTBCEEEEECCTTCCSSSCHHHHHCCHHHHHTTSSCEEEEECCCTTCTTCBCSSCE
T ss_pred eEEEEEEECccCCCceEEEECCCCCCCCEEEEeCCCCCCCCcchhhcCCCHHHHHhcCCeEEEEECCCCCccccccCCcc
Confidence 3444555554 355555542221 3467899999973 3433222 12345567999999999764 222211100
Q ss_pred ------CccchHHH-HHHHHHHHHH-hCCC--cEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccc
Q 020064 92 ------DQNTTWDL-IDDIEKLRQH-LEIP--EWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLL 149 (331)
Q Consensus 92 ------~~~~~~~~-~~~~~~~~~~-~~~~--~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~ 149 (331)
....++++ ++++..+++. ++.. +++|+|+||||.+++.++.++|+++++++++++...
T Consensus 88 ~~~g~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~ 155 (304)
T 1sfr_A 88 CGKAGCQTYKWETFLTSELPGWLQANRHVKPTGSAVVGLSMAASSALTLAIYHPQQFVYAGAMSGLLD 155 (304)
T ss_dssp EETTEEECCBHHHHHHTHHHHHHHHHHCBCSSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSC
T ss_pred ccccccccccHHHHHHHHHHHHHHHHCCCCCCceEEEEECHHHHHHHHHHHhCccceeEEEEECCccC
Confidence 02345554 4788777776 5654 899999999999999999999999999999998653
|
| >2x5x_A PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE, hydrolase, biodegradation, catal; HET: PG4; 1.20A {Paucimonas lemoignei} PDB: 2vtv_A* 2x76_A | Back alignment and structure |
|---|
Probab=99.71 E-value=8.3e-18 Score=134.30 Aligned_cols=107 Identities=15% Similarity=0.075 Sum_probs=87.2
Q ss_pred CCCcEEEeccCCCC-----------CCC----CCcccccCCCCcE---EEEecCCCCCCCCCCC--CCCccchHHHHHHH
Q 020064 44 TGHPVVFLHGGPGG-----------GTT----PSNRRFFDPDFYR---IILFDQRGAGKSTPHA--CLDQNTTWDLIDDI 103 (331)
Q Consensus 44 ~~~~vl~~HG~~~~-----------~~~----~~~~~~~~~~g~~---vi~~D~~G~G~s~~~~--~~~~~~~~~~~~~~ 103 (331)
++++|||+||++++ ..| ..++..+.++||+ |+++|++|+|.|..+. ....+..+++++++
T Consensus 39 ~~~pVVlvHG~~~~~~~~~~~~~~~~~w~~~~~~l~~~L~~~Gy~~~~V~~~D~~g~G~S~~~~~~~~~~~~~~~l~~~I 118 (342)
T 2x5x_A 39 TKTPVIFIHGNGDNAISFDMPPGNVSGYGTPARSVYAELKARGYNDCEIFGVTYLSSSEQGSAQYNYHSSTKYAIIKTFI 118 (342)
T ss_dssp CSCCEEEECCTTCCGGGGGCCCCCCTTTCCCSSCHHHHHHHTTCCTTSEEEECCSCHHHHTCGGGCCBCHHHHHHHHHHH
T ss_pred CCCeEEEECCcCCCcccccccccccccccccHHHHHHHHHhCCCCCCeEEEEeCCCCCccCCccccCCHHHHHHHHHHHH
Confidence 56789999997663 234 4556666677998 9999999999886442 11345677888889
Q ss_pred HHHHHHhCCCcEEEEEeChhHHHHHHHHHhC--CCceeeEEEeccccch
Q 020064 104 EKLRQHLEIPEWQVFGGSWGSTLALAYSLAH--PDKVTGLVLRGIFLLR 150 (331)
Q Consensus 104 ~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~--p~~v~~li~~~~~~~~ 150 (331)
..+++.++.++++|+||||||.+++.++.++ |++|+++|+++++...
T Consensus 119 ~~l~~~~g~~~v~LVGHSmGG~iA~~~a~~~~~p~~V~~lVlla~p~~G 167 (342)
T 2x5x_A 119 DKVKAYTGKSQVDIVAHSMGVSMSLATLQYYNNWTSVRKFINLAGGIRG 167 (342)
T ss_dssp HHHHHHHTCSCEEEEEETHHHHHHHHHHHHHTCGGGEEEEEEESCCTTC
T ss_pred HHHHHHhCCCCEEEEEECHHHHHHHHHHHHcCchhhhcEEEEECCCccc
Confidence 9999999999999999999999999999998 8999999999987653
|
| >3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides vulgatus atcc 8482} | Back alignment and structure |
|---|
Probab=99.71 E-value=7.2e-19 Score=145.12 Aligned_cols=123 Identities=11% Similarity=0.019 Sum_probs=82.9
Q ss_pred eeEeCCCceEEEEeC---C-CCCCCcEEEeccCCCCCC---------------CC----CcccccCCCCcEEEEecCCCC
Q 020064 26 ILKVSDIHTIYWEQS---G-NPTGHPVVFLHGGPGGGT---------------TP----SNRRFFDPDFYRIILFDQRGA 82 (331)
Q Consensus 26 ~~~~~~g~~l~~~~~---g-~~~~~~vl~~HG~~~~~~---------------~~----~~~~~~~~~g~~vi~~D~~G~ 82 (331)
.+.+.+|.++..... + ....|+||++||++++.. +. .++..++++||.|+++|+||+
T Consensus 91 ~~~~~~g~~l~~~l~~P~~~~~~~P~Vl~~HG~g~~~~~~~~~~~~~~~~~~~y~~~~~~~a~~la~~G~~Vl~~D~rg~ 170 (391)
T 3g8y_A 91 EFYPFPKSVSTFLVLKPEHLKGAVPGVLCIPGSGRTKEGLVGEPGICDKLTEDYNNPKVSMALNMVKEGYVAVAVDNAAA 170 (391)
T ss_dssp EECCSTTCCEEEEEEEETTCCSCEEEEEEECCTTCCHHHHTTCCCSSGGGCCCTTSTTTCHHHHHHTTTCEEEECCCTTS
T ss_pred EEEcCCCCEEEEEEEeCCCCCCCCCEEEEeCCCCCCchhhccccccccccchhhcchHHHHHHHHHHCCCEEEEecCCCc
Confidence 344556766665433 2 223468999999665421 11 455667789999999999999
Q ss_pred CCCCCCCCCC---ccchHHH---------------HHHHHHHHHHhC------CCcEEEEEeChhHHHHHHHHHhCCCce
Q 020064 83 GKSTPHACLD---QNTTWDL---------------IDDIEKLRQHLE------IPEWQVFGGSWGSTLALAYSLAHPDKV 138 (331)
Q Consensus 83 G~s~~~~~~~---~~~~~~~---------------~~~~~~~~~~~~------~~~v~lvG~S~Gg~~a~~~a~~~p~~v 138 (331)
|.|....... .+....+ +.|+..+++.+. .++|.++||||||.+++.+|... +++
T Consensus 171 G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~a~d~l~~~~~vd~~rI~v~G~S~GG~~al~~a~~~-~~i 249 (391)
T 3g8y_A 171 GEASDLECYDKGWNYDYDVVSRFLLELGWSWLGYTSYLDMQVLNWMKAQSYIRKDRIVISGFSLGTEPMMVLGVLD-KDI 249 (391)
T ss_dssp GGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTCTTEEEEEEEEEEEGGGHHHHHHHHHHC-TTC
T ss_pred cccCCcccccccccchHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhccCCCCCeEEEEEEChhHHHHHHHHHcC-Cce
Confidence 9998553110 0223233 256666666652 35799999999999999988765 579
Q ss_pred eeEEEeccccc
Q 020064 139 TGLVLRGIFLL 149 (331)
Q Consensus 139 ~~li~~~~~~~ 149 (331)
+++|++++...
T Consensus 250 ~a~v~~~~~~~ 260 (391)
T 3g8y_A 250 YAFVYNDFLCQ 260 (391)
T ss_dssp CEEEEESCBCC
T ss_pred eEEEEccCCCC
Confidence 99998876544
|
| >3iii_A COCE/NOND family hydrolase; structural genomics, center for structural genomi infectious diseases, csgid; HET: MSE PLM; 1.95A {Staphylococcus aureus subsp} PDB: 3ib3_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=8.1e-16 Score=131.18 Aligned_cols=124 Identities=12% Similarity=0.048 Sum_probs=90.9
Q ss_pred cceeEeCCCceEEEEeCCC---CCCCcEEEeccCCCCCC--CC----------------------CcccccCCCCcEEEE
Q 020064 24 TGILKVSDIHTIYWEQSGN---PTGHPVVFLHGGPGGGT--TP----------------------SNRRFFDPDFYRIIL 76 (331)
Q Consensus 24 ~~~~~~~~g~~l~~~~~g~---~~~~~vl~~HG~~~~~~--~~----------------------~~~~~~~~~g~~vi~ 76 (331)
...+...||.+|+...+-+ ..-|+||+.||++.... +. .....++++||.|++
T Consensus 43 ~v~i~~~DG~~L~a~l~~P~~~~~~P~vl~~~pyg~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~Gy~vv~ 122 (560)
T 3iii_A 43 DGTVEMRDGEKLYINIFRPNKDGKFPVVMSADTYGKDNKPKITNMGALWPTLGTIPTSSFTPEESPDPGFWVPNDYVVVK 122 (560)
T ss_dssp EEEEECTTSCEEEEEEEECSSSSCEEEEEEEESSCTTCCCC--CHHHHSGGGCCCCCCTTCCTTSCCHHHHGGGTCEEEE
T ss_pred EEEEECCCCcEEEEEEEecCCCCCCCEEEEecCCCCCcccccccccccccccccccccccccccCCCHHHHHhCCCEEEE
Confidence 4567778998887654432 23467899999655421 10 123467789999999
Q ss_pred ecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCC-----CcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccch
Q 020064 77 FDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEI-----PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLR 150 (331)
Q Consensus 77 ~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~ 150 (331)
+|+||+|.|..... .. .....+|+.++++.+.. .+|.++|+|+||.+++.+|+..|+.++++|..++....
T Consensus 123 ~D~RG~G~S~G~~~--~~-~~~~~~D~~~~i~~l~~~~~~~~~igl~G~S~GG~~al~~a~~~p~~l~aiv~~~~~~d~ 198 (560)
T 3iii_A 123 VALRGSDKSKGVLS--PW-SKREAEDYYEVIEWAANQSWSNGNIGTNGVSYLAVTQWWVASLNPPHLKAMIPWEGLNDM 198 (560)
T ss_dssp EECTTSTTCCSCBC--TT-SHHHHHHHHHHHHHHHTSTTEEEEEEEEEETHHHHHHHHHHTTCCTTEEEEEEESCCCBH
T ss_pred EcCCCCCCCCCccc--cC-ChhHHHHHHHHHHHHHhCCCCCCcEEEEccCHHHHHHHHHHhcCCCceEEEEecCCcccc
Confidence 99999999986542 11 13566777776666532 48999999999999999999999999999999987654
|
| >2b9v_A Alpha-amino acid ester hydrolase; catalytic triad, alpha/beta-hydrolase; 2.00A {Acetobacter pasteurianus} SCOP: b.18.1.13 c.69.1.21 PDB: 2b4k_A 1nx9_A* 1ryy_A | Back alignment and structure |
|---|
Probab=99.69 E-value=9.6e-16 Score=133.83 Aligned_cols=128 Identities=12% Similarity=-0.021 Sum_probs=86.6
Q ss_pred ccceeEeCCCceEEEEeCCC---CCCCcEEEeccCCCCC----CCC--------Ccc-cccCCCCcEEEEecCCCCCCCC
Q 020064 23 STGILKVSDIHTIYWEQSGN---PTGHPVVFLHGGPGGG----TTP--------SNR-RFFDPDFYRIILFDQRGAGKST 86 (331)
Q Consensus 23 ~~~~~~~~~g~~l~~~~~g~---~~~~~vl~~HG~~~~~----~~~--------~~~-~~~~~~g~~vi~~D~~G~G~s~ 86 (331)
+...++..||.+|+...+-+ ...|+||++||++... .+. ... ..++++||.|+.+|+||+|.|.
T Consensus 38 ~~v~i~~~DG~~L~~~l~~P~~~~~~PvIl~~hpyg~~~~~~~~~~~~~~~~~~~~~~~~la~~GyaVv~~D~RG~g~S~ 117 (652)
T 2b9v_A 38 REVMVPMRDGVKLYTVIVIPKNARNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVEGGYIRVFQDIRGKYGSQ 117 (652)
T ss_dssp EEEEEECTTSCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTCC
T ss_pred EEEEEECCCCcEEEEEEEecCCCCCccEEEEECCCCCCcccccccccccccccccchHHHHHhCCCEEEEEecCcCCCCC
Confidence 44567788998887654432 1236788889854321 111 112 5677899999999999999998
Q ss_pred CCCCCCc-----cch--HHHHHHHHHHHHHhC------CCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccch
Q 020064 87 PHACLDQ-----NTT--WDLIDDIEKLRQHLE------IPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLR 150 (331)
Q Consensus 87 ~~~~~~~-----~~~--~~~~~~~~~~~~~~~------~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~ 150 (331)
....... +.. ....+|+.++++.+. ..+|.++|+|+||.+++.+|..+|++++++|.+++....
T Consensus 118 g~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~d~rvgl~G~SyGG~~al~~a~~~~~~lka~v~~~~~~d~ 194 (652)
T 2b9v_A 118 GDYVMTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESNGRVGMTGSSYEGFTVVMALLDPHPALKVAAPESPMVDG 194 (652)
T ss_dssp SCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEEEEEEEEEEEHHHHHHHHHHTSCCTTEEEEEEEEECCCT
T ss_pred CcccccccccccccccccchhhHHHHHHHHHHhcCCCCCCCEEEEecCHHHHHHHHHHhcCCCceEEEEeccccccc
Confidence 6532110 110 134455555544432 138999999999999999999899999999999887653
|
| >1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation; HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2 c.69.1.19 PDB: 2ppl_A | Back alignment and structure |
|---|
Probab=99.69 E-value=1.2e-17 Score=138.29 Aligned_cols=104 Identities=13% Similarity=0.054 Sum_probs=82.7
Q ss_pred CCCCcEEEeccCCCCCC-CC-C-cccccCC-CCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHh------CC
Q 020064 43 PTGHPVVFLHGGPGGGT-TP-S-NRRFFDP-DFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHL------EI 112 (331)
Q Consensus 43 ~~~~~vl~~HG~~~~~~-~~-~-~~~~~~~-~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~------~~ 112 (331)
+++|+||++||+.++.. .| . ....+++ .+|+||++|+||+|.+..+. ..++.+.+++++.++++.+ +.
T Consensus 68 ~~~p~vvliHG~~~s~~~~w~~~l~~~ll~~~~~~VI~vD~~g~g~s~y~~--~~~~~~~~a~~l~~ll~~L~~~~g~~~ 145 (450)
T 1rp1_A 68 TDKKTRFIIHGFIDKGEENWLLDMCKNMFKVEEVNCICVDWKKGSQTSYTQ--AANNVRVVGAQVAQMLSMLSANYSYSP 145 (450)
T ss_dssp TTSEEEEEECCCCCTTCTTHHHHHHHHHTTTCCEEEEEEECHHHHSSCHHH--HHHHHHHHHHHHHHHHHHHHHHHCCCG
T ss_pred CCCCeEEEEccCCCCCCcchHHHHHHHHHhcCCeEEEEEeCccccCCcchH--HHHHHHHHHHHHHHHHHHHHHhcCCCh
Confidence 35788999999877643 33 3 3444554 48999999999999875222 2356777888998888876 46
Q ss_pred CcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccc
Q 020064 113 PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLL 149 (331)
Q Consensus 113 ~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~ 149 (331)
++++|+||||||.+|..+|..+|+ +.++++++|..+
T Consensus 146 ~~v~LVGhSlGg~vA~~~a~~~p~-v~~iv~Ldpa~p 181 (450)
T 1rp1_A 146 SQVQLIGHSLGAHVAGEAGSRTPG-LGRITGLDPVEA 181 (450)
T ss_dssp GGEEEEEETHHHHHHHHHHHTSTT-CCEEEEESCCCT
T ss_pred hhEEEEEECHhHHHHHHHHHhcCC-cccccccCcccc
Confidence 799999999999999999999999 999999998664
|
| >1hpl_A Lipase; hydrolase(carboxylic esterase); 2.30A {Equus caballus} SCOP: b.12.1.2 c.69.1.19 | Back alignment and structure |
|---|
Probab=99.68 E-value=7.4e-18 Score=139.48 Aligned_cols=105 Identities=13% Similarity=0.007 Sum_probs=82.9
Q ss_pred CCCCcEEEeccCCCCC-CCC-C-cccccC-CCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHh------CC
Q 020064 43 PTGHPVVFLHGGPGGG-TTP-S-NRRFFD-PDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHL------EI 112 (331)
Q Consensus 43 ~~~~~vl~~HG~~~~~-~~~-~-~~~~~~-~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~------~~ 112 (331)
+++|+||++||+.++. ..| . .+..++ ..+|+||++|++|||.|..+. ..++.+.+++++.++++.+ +.
T Consensus 67 ~~~p~vvliHG~~~s~~~~w~~~l~~~ll~~~~~~VI~vD~~g~g~s~y~~--~~~~~~~v~~~la~ll~~L~~~~g~~~ 144 (449)
T 1hpl_A 67 TGRKTRFIIHGFIDKGEESWLSTMCQNMFKVESVNCICVDWKSGSRTAYSQ--ASQNVRIVGAEVAYLVGVLQSSFDYSP 144 (449)
T ss_dssp TTSEEEEEECCCCCTTCTTHHHHHHHHHHHHCCEEEEEEECHHHHSSCHHH--HHHHHHHHHHHHHHHHHHHHHHHCCCG
T ss_pred CCCCeEEEEecCCCCCCccHHHHHHHHHHhcCCeEEEEEeCCcccCCccHH--HHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 3578899999987764 233 2 334443 468999999999999986322 2356677888888888766 46
Q ss_pred CcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccc
Q 020064 113 PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLL 149 (331)
Q Consensus 113 ~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~ 149 (331)
++++|+||||||.+|..+|.++|+++.++++++|+.+
T Consensus 145 ~~v~LIGhSlGg~vA~~~a~~~p~~v~~iv~Ldpa~p 181 (449)
T 1hpl_A 145 SNVHIIGHSLGSHAAGEAGRRTNGAVGRITGLDPAEP 181 (449)
T ss_dssp GGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCT
T ss_pred ccEEEEEECHhHHHHHHHHHhcchhcceeeccCcccc
Confidence 7999999999999999999999999999999998654
|
| >3guu_A Lipase A; protein structure, hydrolase; HET: 1PE; 2.10A {Candida antarctica} PDB: 2veo_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=1.1e-16 Score=132.07 Aligned_cols=83 Identities=14% Similarity=0.133 Sum_probs=58.1
Q ss_pred CCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCC---CcEEEEEeChhHHHHHHHHHhCC----C-cee
Q 020064 68 DPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEI---PEWQVFGGSWGSTLALAYSLAHP----D-KVT 139 (331)
Q Consensus 68 ~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~v~lvG~S~Gg~~a~~~a~~~p----~-~v~ 139 (331)
+++||.|+++|++|+|.+.... ...-....+.+.++.+..+. .++.++|||+||..++.+|...| + .+.
T Consensus 152 l~~G~~Vv~~Dy~G~G~~y~~~---~~~~~~vlD~vrAa~~~~~~~~~~~v~l~G~S~GG~aal~aa~~~~~yapel~~~ 228 (462)
T 3guu_A 152 LQQGYYVVSSDHEGFKAAFIAG---YEEGMAILDGIRALKNYQNLPSDSKVALEGYSGGAHATVWATSLAESYAPELNIV 228 (462)
T ss_dssp HHTTCEEEEECTTTTTTCTTCH---HHHHHHHHHHHHHHHHHTTCCTTCEEEEEEETHHHHHHHHHHHHHHHHCTTSEEE
T ss_pred HhCCCEEEEecCCCCCCcccCC---cchhHHHHHHHHHHHHhccCCCCCCEEEEeeCccHHHHHHHHHhChhhcCccceE
Confidence 7899999999999999753221 11122344444444444332 68999999999999998887543 3 689
Q ss_pred eEEEeccccchhhh
Q 020064 140 GLVLRGIFLLRKKE 153 (331)
Q Consensus 140 ~li~~~~~~~~~~~ 153 (331)
+++..+++......
T Consensus 229 g~~~~~~p~dl~~~ 242 (462)
T 3guu_A 229 GASHGGTPVSAKDT 242 (462)
T ss_dssp EEEEESCCCBHHHH
T ss_pred EEEEecCCCCHHHH
Confidence 99999988765443
|
| >3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.67 E-value=1.6e-16 Score=131.33 Aligned_cols=123 Identities=11% Similarity=0.004 Sum_probs=82.4
Q ss_pred ceeEeCCCceEEEEeC---C-CCCCCcEEEeccCCCCCC---------------CC----CcccccCCCCcEEEEecCCC
Q 020064 25 GILKVSDIHTIYWEQS---G-NPTGHPVVFLHGGPGGGT---------------TP----SNRRFFDPDFYRIILFDQRG 81 (331)
Q Consensus 25 ~~~~~~~g~~l~~~~~---g-~~~~~~vl~~HG~~~~~~---------------~~----~~~~~~~~~g~~vi~~D~~G 81 (331)
..+...+|.++..... + ....|+||++||++++.. +. ..+..++++||.|+++|+||
T Consensus 95 v~~~~~~g~~l~~~l~~P~~~~~~~P~Vv~~HG~g~~~~~~~~~~g~~~~~~~~y~~~~~~~a~~la~~Gy~Vl~~D~rG 174 (398)
T 3nuz_A 95 WEFYPLPKCVSTFLVLIPDNINKPVPAILCIPGSGGNKEGLAGEPGIAPKLNDRYKDPKLTQALNFVKEGYIAVAVDNPA 174 (398)
T ss_dssp EEECCSTTBCEEEEEEEESSCCSCEEEEEEECCTTCCHHHHHTCCCSSSTTCCSTTCTTTCHHHHHHTTTCEEEEECCTT
T ss_pred EEEEcCCCcEEEEEEEeCCCCCCCccEEEEEcCCCCCcccccccccccccccccccchHHHHHHHHHHCCCEEEEecCCC
Confidence 3455567766665433 2 223478999999765422 11 45667778999999999999
Q ss_pred CCCCCCCCCC------------------CccchHHHHHHHHHHHHHhC------CCcEEEEEeChhHHHHHHHHHhCCCc
Q 020064 82 AGKSTPHACL------------------DQNTTWDLIDDIEKLRQHLE------IPEWQVFGGSWGSTLALAYSLAHPDK 137 (331)
Q Consensus 82 ~G~s~~~~~~------------------~~~~~~~~~~~~~~~~~~~~------~~~v~lvG~S~Gg~~a~~~a~~~p~~ 137 (331)
+|.|...... ........+.|+..+++.+. .++|.++||||||.+++.+++..+ +
T Consensus 175 ~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~ald~l~~~~~vd~~rI~v~G~S~GG~~a~~~aa~~~-~ 253 (398)
T 3nuz_A 175 AGEASDLERYTLGSNYDYDVVSRYLLELGWSYLGYASYLDMQVLNWMKTQKHIRKDRIVVSGFSLGTEPMMVLGTLDT-S 253 (398)
T ss_dssp SGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTCSSEEEEEEEEEEEGGGHHHHHHHHHHCT-T
T ss_pred CCccccccccccccccchhhhhhHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEECHhHHHHHHHHhcCC-c
Confidence 9998744310 00111223456666777663 247999999999999998888754 7
Q ss_pred eeeEEEecccc
Q 020064 138 VTGLVLRGIFL 148 (331)
Q Consensus 138 v~~li~~~~~~ 148 (331)
++++|.+++..
T Consensus 254 i~a~v~~~~~~ 264 (398)
T 3nuz_A 254 IYAFVYNDFLC 264 (398)
T ss_dssp CCEEEEESCBC
T ss_pred EEEEEEecccc
Confidence 88888876543
|
| >3n2z_B Lysosomal Pro-X carboxypeptidase; alpha/beta hydrolase, PRCP, serine carboxypeptidase, hydrola; HET: NAG; 2.79A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.65 E-value=1.3e-16 Score=131.73 Aligned_cols=107 Identities=21% Similarity=0.266 Sum_probs=81.0
Q ss_pred CCCcEEEeccCCCCCCC-C---CcccccCC-CCcEEEEecCCCCCCCCCCC--------CCCccchHHHHHHHHHHHHHh
Q 020064 44 TGHPVVFLHGGPGGGTT-P---SNRRFFDP-DFYRIILFDQRGAGKSTPHA--------CLDQNTTWDLIDDIEKLRQHL 110 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~~-~---~~~~~~~~-~g~~vi~~D~~G~G~s~~~~--------~~~~~~~~~~~~~~~~~~~~~ 110 (331)
.+.||+|+||+.++... + .....+++ .|++|+++|+||||+|.+.. .....+.+++++|+..+++.+
T Consensus 37 ~g~Pi~l~~Ggeg~~~~~~~~~g~~~~lA~~~~~~Vi~~DhRg~G~S~p~~~~~~~~~~~l~~lt~~q~~~Dl~~~~~~l 116 (446)
T 3n2z_B 37 NGGSILFYTGNEGDIIWFCNNTGFMWDVAEELKAMLVFAEHRYYGESLPFGDNSFKDSRHLNFLTSEQALADFAELIKHL 116 (446)
T ss_dssp TTCEEEEEECCSSCHHHHHHHCHHHHHHHHHHTEEEEEECCTTSTTCCTTGGGGGSCTTTSTTCSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCcchhhhhcccHHHHHHHHhCCcEEEEecCCCCCCCCCCccccccchhhccCCHHHHHHHHHHHHHHH
Confidence 45568999998776332 1 11122222 37899999999999997532 112246889999999999887
Q ss_pred CC-------CcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccch
Q 020064 111 EI-------PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLR 150 (331)
Q Consensus 111 ~~-------~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~ 150 (331)
+. .+++++||||||.+++.++.++|++|.++|+.+++...
T Consensus 117 ~~~~~~~~~~p~il~GhS~GG~lA~~~~~~yP~~v~g~i~ssapv~~ 163 (446)
T 3n2z_B 117 KRTIPGAENQPVIAIGGSYGGMLAAWFRMKYPHMVVGALAASAPIWQ 163 (446)
T ss_dssp HHHSTTGGGCCEEEEEETHHHHHHHHHHHHCTTTCSEEEEETCCTTC
T ss_pred HHhcccCCCCCEEEEEeCHHHHHHHHHHHhhhccccEEEEeccchhc
Confidence 54 38999999999999999999999999999998876543
|
| >2hih_A Lipase 46 kDa form; A1 phospholipase, phospholipid binding, hydrolase; 2.86A {Staphylococcus hyicus} | Back alignment and structure |
|---|
Probab=99.59 E-value=1.5e-17 Score=136.49 Aligned_cols=107 Identities=14% Similarity=0.047 Sum_probs=76.8
Q ss_pred CCCcEEEeccCCCC--------CCCC-----CcccccCCCCcEEEEecCCCCCCCCCCCC-----------------CCc
Q 020064 44 TGHPVVFLHGGPGG--------GTTP-----SNRRFFDPDFYRIILFDQRGAGKSTPHAC-----------------LDQ 93 (331)
Q Consensus 44 ~~~~vl~~HG~~~~--------~~~~-----~~~~~~~~~g~~vi~~D~~G~G~s~~~~~-----------------~~~ 93 (331)
++++|||+||++++ ..+| .+...+.++||+|+++|+||+|.|..... ...
T Consensus 51 ~~~pVVLvHG~~g~~~~~~~~~~~~W~~~~~~l~~~L~~~Gy~Via~Dl~G~G~S~~~~~~l~~~i~~g~g~sg~~~~~~ 130 (431)
T 2hih_A 51 NKDPFVFVHGFTGFVGEVAAKGENYWGGTKANLRNHLRKAGYETYEASVSALASNHERAVELYYYLKGGRVDYGAAHSEK 130 (431)
T ss_dssp CSSCEEEECCTTCCCGGGSCTTCCTTTTTTCCHHHHHHHTTCCEEEECCCSSSCHHHHHHHHHHHHHCEEEECCHHHHHH
T ss_pred CCCeEEEECCCCCCcccccccchhhhhccHHHHHHHHHhCCCEEEEEcCCCCCCCccchHHhhhhhhhcccccccccccc
Confidence 57889999997653 2233 25555656899999999999998852110 001
Q ss_pred cchHHHHHHHHHHHHHhCC-CcEEEEEeChhHHHHHHHHHh--------------------------CCCceeeEEEecc
Q 020064 94 NTTWDLIDDIEKLRQHLEI-PEWQVFGGSWGSTLALAYSLA--------------------------HPDKVTGLVLRGI 146 (331)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~-~~v~lvG~S~Gg~~a~~~a~~--------------------------~p~~v~~li~~~~ 146 (331)
++++++++|+.++++.++. ++++||||||||.++..+|.. +|++|.++|++++
T Consensus 131 ~~~~~~a~dl~~ll~~l~~~~kv~LVGHSmGG~iA~~lA~~l~~~~~~~~~~~~~~gg~i~~l~~g~~p~~V~slv~i~t 210 (431)
T 2hih_A 131 YGHERYGKTYEGVLKDWKPGHPVHFIGHSMGGQTIRLLEHYLRFGDKAEIAYQQQHGGIISELFKGGQDNMVTSITTIAT 210 (431)
T ss_dssp HTCCSEEEEECCSCTTCBTTBCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHCSCCCHHHHCCCCSCEEEEEEESC
T ss_pred CCHHHHHHHHHHHHHHhCCCCCEEEEEEChhHHHHHHHHHHhccccccchhhccccccccccccccCcccceeEEEEECC
Confidence 2233344455556666653 799999999999999999876 6899999999998
Q ss_pred ccch
Q 020064 147 FLLR 150 (331)
Q Consensus 147 ~~~~ 150 (331)
+...
T Consensus 211 P~~G 214 (431)
T 2hih_A 211 PHNG 214 (431)
T ss_dssp CTTC
T ss_pred CCCC
Confidence 6543
|
| >1gkl_A Endo-1,4-beta-xylanase Y; hydrolase, esterase family 1, inactive mutant; HET: FER; 1.4A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1wb4_A* 1wb5_A* 1wb6_A* 1gkk_A* | Back alignment and structure |
|---|
Probab=99.56 E-value=3e-14 Score=112.94 Aligned_cols=118 Identities=8% Similarity=-0.119 Sum_probs=76.7
Q ss_pred cceeEeCCCceEEEEeCCCC------CCCcEEEeccCCCCCC-CCC-------cccccCCC----CcEEEEecCCCCCCC
Q 020064 24 TGILKVSDIHTIYWEQSGNP------TGHPVVFLHGGPGGGT-TPS-------NRRFFDPD----FYRIILFDQRGAGKS 85 (331)
Q Consensus 24 ~~~~~~~~g~~l~~~~~g~~------~~~~vl~~HG~~~~~~-~~~-------~~~~~~~~----g~~vi~~D~~G~G~s 85 (331)
...+...++ .+.+..+-++ ..|+|+++||++++.. |.. .+..+.++ ++.|+++|.+|- +
T Consensus 43 ~~~~~s~~~-~~~~~vy~P~~~~~~~~~Pvlv~lHG~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ivv~pd~~~~--~ 119 (297)
T 1gkl_A 43 KETYTGING-TKSLNVYLPYGYDPNKKYNIFYLMHGGGENENTIFSNDVKLQNILDHAIMNGELEPLIVVTPTFNGG--N 119 (297)
T ss_dssp EEEEEETTE-EEEEEEEECTTCCTTSCCEEEEEECCTTCCTTSTTSTTTCHHHHHHHHHHTTSSCCEEEEECCSCST--T
T ss_pred EEEEEcCCC-EEEEEEEeCCCCCCCCCCCEEEEECCCCCCcchhhcccchHHHHHHHHHHcCCCCCEEEEEecCcCC--c
Confidence 344455555 5555443221 2367888999766543 221 12233333 699999998752 2
Q ss_pred CCCCCCCccchHHHHHHHHHHHHHh-C--------------CCcEEEEEeChhHHHHHHHHHhCCCceeeEEEecccc
Q 020064 86 TPHACLDQNTTWDLIDDIEKLRQHL-E--------------IPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFL 148 (331)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~-~--------------~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~ 148 (331)
.... .+ .+.+++++...++.. . ..++.|+|+||||.+++.++.++|+++++++++++..
T Consensus 120 ~~~~---~~-~~~~~~~l~~~i~~~~~~~~~~~~~~~i~~d~~~~~i~G~S~GG~~al~~a~~~p~~f~~~v~~sg~~ 193 (297)
T 1gkl_A 120 CTAQ---NF-YQEFRQNVIPFVESKYSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLDYVAYFMPLSGDY 193 (297)
T ss_dssp CCTT---TH-HHHHHHTHHHHHHHHSCSSCSSCSHHHHHTTGGGEEEEEETHHHHHHHHHHHHHTTTCCEEEEESCCC
T ss_pred cchH---HH-HHHHHHHHHHHHHHhCCccccccccccccCCccceEEEEECHHHHHHHHHHHhCchhhheeeEecccc
Confidence 2111 11 345567777777653 2 2469999999999999999999999999999999854
|
| >2dsn_A Thermostable lipase; T1 lipase, hydrolase; 1.50A {Geobacillus zalihae} PDB: 3umj_A 2z5g_A 1ji3_A 3auk_A 2w22_A* 1ku0_A | Back alignment and structure |
|---|
Probab=99.55 E-value=1.3e-14 Score=117.52 Aligned_cols=101 Identities=16% Similarity=0.119 Sum_probs=70.7
Q ss_pred CCCCcEEEeccCCCCC-------CCCC-cc----cccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHH-----
Q 020064 43 PTGHPVVFLHGGPGGG-------TTPS-NR----RFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEK----- 105 (331)
Q Consensus 43 ~~~~~vl~~HG~~~~~-------~~~~-~~----~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~----- 105 (331)
+++++|||+||+.++. .+|. .. ..+.++||+|+++|+||+|.|... ..++.+.+..
T Consensus 4 ~~~~pVVLvHG~~g~~~~~~~~~~yW~~~~~~la~~L~~~G~~Via~Dl~g~G~s~~~-------a~~l~~~i~~~~vDy 76 (387)
T 2dsn_A 4 ANDAPIVLLHGFTGWGREEMFGFKYWGGVRGDIEQWLNDNGYRTYTLAVGPLSSNWDR-------ACEAYAQLVGGTVDY 76 (387)
T ss_dssp CCCCCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHHTTCCEEEECCCSSBCHHHH-------HHHHHHHHHCEEEEC
T ss_pred CCCCcEEEECCCCCCCcccccccchhhhhhHHHHHHHHHCCCEEEEecCCCCCCcccc-------HHHHHHHHHhhhhhh
Confidence 3578899999976543 1232 22 555568999999999999976421 1222222221
Q ss_pred -------------------HHHH-hCCCcEEEEEeChhHHHHHHHHHh-------------------CC------Cceee
Q 020064 106 -------------------LRQH-LEIPEWQVFGGSWGSTLALAYSLA-------------------HP------DKVTG 140 (331)
Q Consensus 106 -------------------~~~~-~~~~~v~lvG~S~Gg~~a~~~a~~-------------------~p------~~v~~ 140 (331)
+++. .+.++++||||||||.++..++.. +| ++|++
T Consensus 77 ~~~~a~~~~~~~~~~~l~~ll~~~~~~~kv~LVGHSmGG~va~~~a~~l~~~~~~e~~~~~~~~~~~~P~~~g~~~~V~s 156 (387)
T 2dsn_A 77 GAAHAAKHGHARFGRTYPGLLPELKRGGRIHIIAHSQGGQTARMLVSLLENGSQEEREYAKAHNVSLSPLFEGGHHFVLS 156 (387)
T ss_dssp CHHHHHHHTSCSEEEEECCSCGGGGTTCCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCCCCEEE
T ss_pred hhhhhhhccchhhhhhHHHHHHHhcCCCceEEEEECHHHHHHHHHHHHhccccccccccccccccccCccccccccceeE
Confidence 1222 467899999999999999999972 35 78999
Q ss_pred EEEeccccch
Q 020064 141 LVLRGIFLLR 150 (331)
Q Consensus 141 li~~~~~~~~ 150 (331)
+|+++++...
T Consensus 157 LV~i~tP~~G 166 (387)
T 2dsn_A 157 VTTIATPHDG 166 (387)
T ss_dssp EEEESCCTTC
T ss_pred EEEECCCCCC
Confidence 9999986543
|
| >2px6_A Thioesterase domain; thioesaterse domain, orlistat, fatty acid synthase, drug complex, tetrahydrolipstatin, transferase; HET: DH9; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.51 E-value=8e-13 Score=105.99 Aligned_cols=94 Identities=14% Similarity=0.081 Sum_probs=72.5
Q ss_pred CCCcEEEeccCCCCCCCC-CcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCC-CcEEEEEeC
Q 020064 44 TGHPVVFLHGGPGGGTTP-SNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEI-PEWQVFGGS 121 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~~~-~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~lvG~S 121 (331)
++++++|+||++++...| .+...+ . +.|+++|+|+ . . ...+++++++++.+.++.+.. ++++++|||
T Consensus 45 ~~~~l~~~hg~~g~~~~~~~~~~~l-~--~~v~~~~~~~--~--~----~~~~~~~~a~~~~~~i~~~~~~~~~~l~G~S 113 (316)
T 2px6_A 45 SERPLFLVHPIEGSTTVFHSLASRL-S--IPTYGLQCTR--A--A----PLDSIHSLAAYYIDCIRQVQPEGPYRVAGYS 113 (316)
T ss_dssp SSCCEEEECCTTCCSGGGHHHHHHC-S--SCEEEECCCT--T--S----CTTCHHHHHHHHHHHHTTTCSSCCCEEEEET
T ss_pred CCCeEEEECCCCCCHHHHHHHHHhc-C--CCEEEEECCC--C--C----CcCCHHHHHHHHHHHHHHhCCCCCEEEEEEC
Confidence 578899999977665444 344444 3 9999999993 1 1 245799999999999988863 689999999
Q ss_pred hhHHHHHHHHHhCC---Cc---eeeEEEecccc
Q 020064 122 WGSTLALAYSLAHP---DK---VTGLVLRGIFL 148 (331)
Q Consensus 122 ~Gg~~a~~~a~~~p---~~---v~~li~~~~~~ 148 (331)
|||.+++.+|.+.+ +. +++++++++.+
T Consensus 114 ~Gg~va~~~a~~l~~~g~~~p~v~~l~li~~~~ 146 (316)
T 2px6_A 114 YGACVAFEMCSQLQAQQSPAPTHNSLFLFDGSP 146 (316)
T ss_dssp HHHHHHHHHHHHHHHHC---CCCCEEEEESCSS
T ss_pred HHHHHHHHHHHHHHHcCCcccccceEEEEcCCc
Confidence 99999999998763 45 89999988754
|
| >2qm0_A BES; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: SVY; 1.84A {Bacillus cereus atcc 14579} | Back alignment and structure |
|---|
Probab=99.43 E-value=1.6e-13 Score=107.72 Aligned_cols=125 Identities=10% Similarity=0.027 Sum_probs=73.2
Q ss_pred cceeEeC-CCceEEEEeCCCC------CCCcEEEeccCCC--C-CCCCCccccc-CCCC---cEEEEecCCCCC------
Q 020064 24 TGILKVS-DIHTIYWEQSGNP------TGHPVVFLHGGPG--G-GTTPSNRRFF-DPDF---YRIILFDQRGAG------ 83 (331)
Q Consensus 24 ~~~~~~~-~g~~l~~~~~g~~------~~~~vl~~HG~~~--~-~~~~~~~~~~-~~~g---~~vi~~D~~G~G------ 83 (331)
...+... .|..+.+..+-++ .-|+|+++||++. . ..+......+ .+.| +.|+++|+|+.+
T Consensus 20 ~~~~~s~~~g~~~~~~v~~P~~~~~~~~~Pvl~~lhG~~~~~~~~~~~~~~~~~~~~~g~~~~ivV~i~~~~~~~~~~~~ 99 (275)
T 2qm0_A 20 QWKMYSKLEGKEYQIHISKPKQPAPDSGYPVIYVLDGNAFFQTFHEAVKIQSVRAEKTGVSPAIIVGVGYPIEGAFSGEE 99 (275)
T ss_dssp EEEEECTTTCCEEEEEEECCSSCCCTTCEEEEEEESHHHHHHHHHHHHHHHGGGHHHHCCCCCEEEEEECSCSSSCCHHH
T ss_pred EEEEEecCCCCEEEEEEECCCCCCCCCCccEEEEecChHHHHHHHHHHHHHhhcchhcCCCCeEEEEECCCCCCcCcccc
Confidence 3344444 4656666555432 2267899999642 1 1111112222 1235 999999998731
Q ss_pred ----CCCCCC------C------CCcc---chHH-HHHHHHHHHHH-hCC--CcEEEEEeChhHHHHHHHHHhCCCceee
Q 020064 84 ----KSTPHA------C------LDQN---TTWD-LIDDIEKLRQH-LEI--PEWQVFGGSWGSTLALAYSLAHPDKVTG 140 (331)
Q Consensus 84 ----~s~~~~------~------~~~~---~~~~-~~~~~~~~~~~-~~~--~~v~lvG~S~Gg~~a~~~a~~~p~~v~~ 140 (331)
.+.... . .... .+.+ +.+++...++. ++. +++.++||||||.+++.++.++|+.+++
T Consensus 100 r~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~l~~~i~~~~~~~~~~~~~~G~S~GG~~a~~~~~~~p~~f~~ 179 (275)
T 2qm0_A 100 RCYDFTPSVISKDAPLKPDGKPWPKTGGAHNFFTFIEEELKPQIEKNFEIDKGKQTLFGHXLGGLFALHILFTNLNAFQN 179 (275)
T ss_dssp HHHHHCSSCCCC---------CCCCCCCHHHHHHHHHHTHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCGGGCSE
T ss_pred cccccCCCCccccCCccccCCcCCCCCChHHHHHHHHHHHHHHHHhhccCCCCCCEEEEecchhHHHHHHHHhCchhhce
Confidence 111000 0 0011 2223 23455555544 333 5899999999999999999999999999
Q ss_pred EEEecccc
Q 020064 141 LVLRGIFL 148 (331)
Q Consensus 141 li~~~~~~ 148 (331)
++++++..
T Consensus 180 ~~~~s~~~ 187 (275)
T 2qm0_A 180 YFISSPSI 187 (275)
T ss_dssp EEEESCCT
T ss_pred eEEeCcee
Confidence 99998753
|
| >3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A* | Back alignment and structure |
|---|
Probab=99.41 E-value=4.9e-13 Score=110.34 Aligned_cols=103 Identities=14% Similarity=0.037 Sum_probs=67.6
Q ss_pred CCCcEEEeccCCC--CCCCCCcccccCCCCc----EEEEecCCCCC-CCCCCCCCCccch-HHHHHHHHHHHHH-hC---
Q 020064 44 TGHPVVFLHGGPG--GGTTPSNRRFFDPDFY----RIILFDQRGAG-KSTPHACLDQNTT-WDLIDDIEKLRQH-LE--- 111 (331)
Q Consensus 44 ~~~~vl~~HG~~~--~~~~~~~~~~~~~~g~----~vi~~D~~G~G-~s~~~~~~~~~~~-~~~~~~~~~~~~~-~~--- 111 (331)
..|+|+++||... .......+..+.++|+ .|+++|.+|++ ++.... ....+ +.+++++...++. +.
T Consensus 196 ~~PvlvllHG~~~~~~~~~~~~~~~l~~~g~~~p~iVV~~d~~~~~~r~~~~~--~~~~~~~~l~~el~~~i~~~~~~~~ 273 (403)
T 3c8d_A 196 ERPLAVLLDGEFWAQSMPVWPVLTSLTHRQQLPPAVYVLIDAIDTTHRAHELP--CNADFWLAVQQELLPLVKVIAPFSD 273 (403)
T ss_dssp CCCEEEESSHHHHHHTSCCHHHHHHHHHTTSSCSCEEEEECCCSHHHHHHHSS--SCHHHHHHHHHTHHHHHHHHSCCCC
T ss_pred CCCEEEEeCCHHHhhcCcHHHHHHHHHHcCCCCCeEEEEECCCCCccccccCC--ChHHHHHHHHHHHHHHHHHHCCCCC
Confidence 3578999999432 1222233445555565 49999998732 121111 11122 3344566666654 33
Q ss_pred -CCcEEEEEeChhHHHHHHHHHhCCCceeeEEEecccc
Q 020064 112 -IPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFL 148 (331)
Q Consensus 112 -~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~ 148 (331)
.++++|+||||||.+++.++.++|+++++++++++..
T Consensus 274 d~~~~~l~G~S~GG~~al~~a~~~p~~f~~~~~~sg~~ 311 (403)
T 3c8d_A 274 RADRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSGSY 311 (403)
T ss_dssp CGGGCEEEEETHHHHHHHHHHHHCTTTCCEEEEESCCT
T ss_pred CCCceEEEEECHHHHHHHHHHHhCchhhcEEEEecccc
Confidence 2589999999999999999999999999999998754
|
| >1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, protective protei glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=99.37 E-value=3.3e-10 Score=93.86 Aligned_cols=131 Identities=13% Similarity=0.138 Sum_probs=86.9
Q ss_pred CCccceeEeCCCceEEEEeCCC----CCCCcEEEeccCCCCCCCCCcccc------------c------CCCCcEEEEec
Q 020064 21 PYSTGILKVSDIHTIYWEQSGN----PTGHPVVFLHGGPGGGTTPSNRRF------------F------DPDFYRIILFD 78 (331)
Q Consensus 21 ~~~~~~~~~~~g~~l~~~~~g~----~~~~~vl~~HG~~~~~~~~~~~~~------------~------~~~g~~vi~~D 78 (331)
.....+++++++..++|+-... .+.|+||++|||+|.+..+..... + ..+..+++-+|
T Consensus 20 ~~~sGyv~v~~~~~lfy~f~~s~~~~~~~Pl~lwlnGGPG~Ss~~g~~~e~GP~~~~~~~~~l~~n~~sw~~~~~~lfiD 99 (452)
T 1ivy_A 20 RQYSGYLKSSGSKHLHYWFVESQKDPENSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYSWNLIANVLYLE 99 (452)
T ss_dssp CEEEEEEECSTTEEEEEEEECCSSCGGGSCEEEEECCTTTBCTHHHHHTTTSSEEECTTSSCEEECTTCGGGSSEEEEEC
T ss_pred eeeEEEEeeCCCCeEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHHHHHhcCCcEEeCCCceeeeCCCcccccccEEEEe
Confidence 3456789998888898875532 346889999999887554211110 0 12567899999
Q ss_pred C-CCCCCCCCCCCCCccchHHHHHHH----HHHHHH---hCCCcEEEEEeChhHHHHHHHHHh----CCCceeeEEEecc
Q 020064 79 Q-RGAGKSTPHACLDQNTTWDLIDDI----EKLRQH---LEIPEWQVFGGSWGSTLALAYSLA----HPDKVTGLVLRGI 146 (331)
Q Consensus 79 ~-~G~G~s~~~~~~~~~~~~~~~~~~----~~~~~~---~~~~~v~lvG~S~Gg~~a~~~a~~----~p~~v~~li~~~~ 146 (331)
. .|.|.|.........+....++|+ ..+++. +...+++|+|+|+||..+..+|.. .+-.++|+++.++
T Consensus 100 qP~GtGfS~~~~~~~~~~~~~~a~~~~~~l~~f~~~~p~~~~~~~~i~GeSYgG~y~p~la~~i~~~~~~~l~g~~ign~ 179 (452)
T 1ivy_A 100 SPAGVGFSYSDDKFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGNG 179 (452)
T ss_dssp CSTTSTTCEESSCCCCCBHHHHHHHHHHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEESC
T ss_pred cCCCCCcCCcCCCCCcCCcHHHHHHHHHHHHHHHHhcHHhcCCCEEEEeeccceeehHHHHHHHHhcCccccceEEecCC
Confidence 6 699999743321122333444443 444443 345789999999999966666654 3567999999999
Q ss_pred ccchh
Q 020064 147 FLLRK 151 (331)
Q Consensus 147 ~~~~~ 151 (331)
.....
T Consensus 180 ~~d~~ 184 (452)
T 1ivy_A 180 LSSYE 184 (452)
T ss_dssp CSBHH
T ss_pred ccChh
Confidence 87654
|
| >2d81_A PHB depolymerase; alpha/beta hydrolase fold, circular permutation, hydrolase; HET: NAG RB3; 1.66A {Penicillium funiculosum} SCOP: c.69.1.37 PDB: 2d80_A* | Back alignment and structure |
|---|
Probab=99.20 E-value=4.7e-11 Score=94.43 Aligned_cols=49 Identities=12% Similarity=0.071 Sum_probs=39.5
Q ss_pred cccccccEEEEecCCCCccCCcchHHHHHhCC------CCcEEEecCCCCCCCcC
Q 020064 262 DNIRHINATIVQGRYDVCCPMMSAWDLHKAWP------EADFKVVADAGHSANEP 310 (331)
Q Consensus 262 ~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~------~~~~~~~~~~gH~~~~~ 310 (331)
.++++.|++++||++|.+||++.++++.+.+. ++++++++++||.+..+
T Consensus 86 ~~l~~~Pvli~HG~~D~vVP~~~s~~~~~~L~~~g~~~~ve~~~~~g~gH~~~~~ 140 (318)
T 2d81_A 86 ANLGQRKIYMWTGSSDTTVGPNVMNQLKAQLGNFDNSANVSYVTTTGAVHTFPTD 140 (318)
T ss_dssp GGGGGCEEEEEEETTCCSSCHHHHHHHHHHHTTTSCGGGEEEEEETTCCSSEEES
T ss_pred HcCCCCcEEEEeCCCCCCcCHHHHHHHHHHHHhcCCCcceEEEEeCCCCCCCccC
Confidence 33434799999999999999999998888763 35788999999987543
|
| >1ac5_A KEX1(delta)P; carboxypeptidase, hydrolase, glycoprotein, transmembrane; HET: NAG; 2.40A {Saccharomyces cerevisiae} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=99.03 E-value=1.1e-07 Score=79.68 Aligned_cols=129 Identities=13% Similarity=0.127 Sum_probs=84.2
Q ss_pred ccceeEeCC---------CceEEEEeCC------CCCCCcEEEeccCCCCCCCCCccc-----------------ccCCC
Q 020064 23 STGILKVSD---------IHTIYWEQSG------NPTGHPVVFLHGGPGGGTTPSNRR-----------------FFDPD 70 (331)
Q Consensus 23 ~~~~~~~~~---------g~~l~~~~~g------~~~~~~vl~~HG~~~~~~~~~~~~-----------------~~~~~ 70 (331)
...++.+.+ +..++|+-.. +.+.|.+|+++||+|.+..+.... .-..+
T Consensus 30 ~aG~~~v~~~~~~~~~~~~~~lfy~~~~~~~~~~~~~~Pl~lwlnGGPG~SS~~g~~~e~GP~~~~~~~~l~~n~~sw~~ 109 (483)
T 1ac5_A 30 HAGHIPLRSEDADEQDSSDLEYFFWKFTNNDSNGNVDRPLIIWLNGGPGCSSMDGALVESGPFRVNSDGKLYLNEGSWIS 109 (483)
T ss_dssp EEEEEECSCSSSCSSCCCCCEEEEEEEECSCSGGGSSCCEEEEECCTTTBCTHHHHHHSSSSEEECTTSCEEECTTCGGG
T ss_pred EEEEEecCccccccccCCCceEEEEEEEecCCCCCcCCCEEEEECCCCchHhhhhhHhhcCCeEecCCCceeecccchhh
Confidence 355676653 5578776332 235688999999988755421100 01124
Q ss_pred CcEEEEecC-CCCCCCCCCCCC--------CccchHHHHHHHHHHHHHh-------CCCcEEEEEeChhHHHHHHHHHhC
Q 020064 71 FYRIILFDQ-RGAGKSTPHACL--------DQNTTWDLIDDIEKLRQHL-------EIPEWQVFGGSWGSTLALAYSLAH 134 (331)
Q Consensus 71 g~~vi~~D~-~G~G~s~~~~~~--------~~~~~~~~~~~~~~~~~~~-------~~~~v~lvG~S~Gg~~a~~~a~~~ 134 (331)
-..++-+|. .|.|.|...... ...+.++.++++..++... ...+++|.|+|+||..+..+|..-
T Consensus 110 ~~n~lfiDqPvGtGfSy~~~~~~~~~~~~~~~~~~~~~a~~~~~fl~~~~~~fP~~~~~~~~i~GeSYgg~y~p~~a~~i 189 (483)
T 1ac5_A 110 KGDLLFIDQPTGTGFSVEQNKDEGKIDKNKFDEDLEDVTKHFMDFLENYFKIFPEDLTRKIILSGESYAGQYIPFFANAI 189 (483)
T ss_dssp TSEEEEECCSTTSTTCSSCCSSGGGSCTTSSCCSHHHHHHHHHHHHHHHHHHCTTGGGSEEEEEEEETHHHHHHHHHHHH
T ss_pred cCCeEEEecCCCccccCCcCcccccccccccCCCHHHHHHHHHHHHHHHHHhChhhcCCCEEEEeccccccccHHHHHHH
Confidence 578999997 699998654321 1235667778777766542 346899999999999888877531
Q ss_pred ------------CCceeeEEEeccccchh
Q 020064 135 ------------PDKVTGLVLRGIFLLRK 151 (331)
Q Consensus 135 ------------p~~v~~li~~~~~~~~~ 151 (331)
+-.++|+++-++.....
T Consensus 190 ~~~n~~~~~~~~~inLkGi~IGNg~~d~~ 218 (483)
T 1ac5_A 190 LNHNKFSKIDGDTYDLKALLIGNGWIDPN 218 (483)
T ss_dssp HHHHHHCCSTTSCCEEEEEEEEEECCCHH
T ss_pred HHhcccccccCcccceeeeEecCCcccch
Confidence 13588998888776543
|
| >1cpy_A Serine carboxypeptidase; hydrolase (carboxypeptidase); HET: NAG; 2.60A {Saccharomyces cerevisiae} SCOP: c.69.1.5 PDB: 1wpx_A* 1ysc_A* | Back alignment and structure |
|---|
Probab=99.00 E-value=1.5e-07 Score=77.14 Aligned_cols=129 Identities=16% Similarity=0.158 Sum_probs=83.5
Q ss_pred CccceeEeCC-CceEEEEeCC----CCCCCcEEEeccCCCCCCCCCcccc-----------c------CCCCcEEEEecC
Q 020064 22 YSTGILKVSD-IHTIYWEQSG----NPTGHPVVFLHGGPGGGTTPSNRRF-----------F------DPDFYRIILFDQ 79 (331)
Q Consensus 22 ~~~~~~~~~~-g~~l~~~~~g----~~~~~~vl~~HG~~~~~~~~~~~~~-----------~------~~~g~~vi~~D~ 79 (331)
....++++++ +..++|+-.. +.+.|.+|+++||++.+..+..... + -.+-..++-+|.
T Consensus 16 ~ysGYv~v~~~~~~lfy~f~~s~~~~~~~Pl~lwlnGGPG~SS~~g~~~e~GP~~~~~~~~l~~n~~sW~~~an~lfiDq 95 (421)
T 1cpy_A 16 QYTGYLDVEDEDKHFFFWTFESRNDPAKDPVILWLNGGPGCSSLTGLFFALGPSSIGPDLKPIGNPYSWNSNATVIFLDQ 95 (421)
T ss_dssp CCEEEEEETTTTEEEEEEEECCSSCTTTSCEEEEECCTTTBCTHHHHTTTTSSEEEETTTEEEECTTCGGGGSEEECCCC
T ss_pred eeEEEEEcCCCCcEEEEEEEEeCCCCCCCCEEEEECCCCchHhHHHHHHccCCcEECCCCceeECCcccccccCEEEecC
Confidence 4567888873 6688876332 3456889999999886554211110 0 013467899995
Q ss_pred -CCCCCCCCCCCCCccchHHHHHHHHHHHHH----h---CC--CcEEEEEeChhHHHHHHHHHhC------CCceeeEEE
Q 020064 80 -RGAGKSTPHACLDQNTTWDLIDDIEKLRQH----L---EI--PEWQVFGGSWGSTLALAYSLAH------PDKVTGLVL 143 (331)
Q Consensus 80 -~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~----~---~~--~~v~lvG~S~Gg~~a~~~a~~~------p~~v~~li~ 143 (331)
.|.|.|..... ...+.++.++|+..+++. . .. .+++|.|.|+||..+..+|..- .-.++|+++
T Consensus 96 PvGtGfSy~~~~-~~~~~~~~a~~~~~fl~~~~~~~p~~~~~~~~~yi~GESY~G~y~p~~a~~i~~~n~~~inLkGi~I 174 (421)
T 1cpy_A 96 PVNVGFSYSGSS-GVSNTVAAGKDVYNFLELFFDQFPEYVNKGQDFHIAGASYAGHYIPVFASEILSHKDRNFNLTSVLI 174 (421)
T ss_dssp STTSTTCEESSC-CCCSSHHHHHHHHHHHHHHHHHCTTSTTTTCCEEEEEETTHHHHHHHHHHHHTTCSSCSSCCCEEEE
T ss_pred CCcccccCCCCC-CCCChHHHHHHHHHHHHHHHHhCHHhcccCCCEEEEeecccccccHHHHHHHHhccccccceeeEEe
Confidence 59998864432 123445666666665543 2 33 5899999999999888887642 125789988
Q ss_pred eccccchh
Q 020064 144 RGIFLLRK 151 (331)
Q Consensus 144 ~~~~~~~~ 151 (331)
-++...+.
T Consensus 175 GNg~~dp~ 182 (421)
T 1cpy_A 175 GNGLTDPL 182 (421)
T ss_dssp ESCCCCHH
T ss_pred cCcccChh
Confidence 77766543
|
| >2gzs_A IROE protein; enterobactin, salmochelin, DFP, hydrolase, catalytic DYAD; HET: DFP; 1.40A {Escherichia coli} SCOP: c.69.1.38 PDB: 2gzr_A* | Back alignment and structure |
|---|
Probab=98.97 E-value=6.3e-10 Score=87.20 Aligned_cols=34 Identities=15% Similarity=0.161 Sum_probs=31.4
Q ss_pred CcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccc
Q 020064 113 PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIF 147 (331)
Q Consensus 113 ~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~ 147 (331)
+++.|+||||||.+++.++.+ |+.+++++++++.
T Consensus 141 ~r~~i~G~S~GG~~a~~~~~~-p~~f~~~~~~s~~ 174 (278)
T 2gzs_A 141 QRRGLWGHSYGGLFVLDSWLS-SSYFRSYYSASPS 174 (278)
T ss_dssp EEEEEEEETHHHHHHHHHHHH-CSSCSEEEEESGG
T ss_pred CceEEEEECHHHHHHHHHHhC-ccccCeEEEeCcc
Confidence 369999999999999999999 9999999999874
|
| >3gff_A IROE-like serine hydrolase; NP_718593.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.12A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=98.93 E-value=7.6e-10 Score=88.52 Aligned_cols=50 Identities=12% Similarity=0.099 Sum_probs=37.7
Q ss_pred HHHHHHHHHHH-hCC-CcEEEEEeChhHHHHHHHHHhCCCceeeEEEecccc
Q 020064 99 LIDDIEKLRQH-LEI-PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFL 148 (331)
Q Consensus 99 ~~~~~~~~~~~-~~~-~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~ 148 (331)
+.+++...++. ... ....++||||||..++.++.++|+.+.+++.++|..
T Consensus 121 l~~el~p~i~~~~~~~~~r~i~G~S~GG~~al~~~~~~p~~F~~~~~~S~~~ 172 (331)
T 3gff_A 121 IEKELAPSIESQLRTNGINVLVGHSFGGLVAMEALRTDRPLFSAYLALDTSL 172 (331)
T ss_dssp HHHTHHHHHHHHSCEEEEEEEEEETHHHHHHHHHHHTTCSSCSEEEEESCCT
T ss_pred HHHHHHHHHHHHCCCCCCeEEEEECHHHHHHHHHHHhCchhhheeeEeCchh
Confidence 33444444443 232 234799999999999999999999999999998853
|
| >2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase, hydrolase; 1.58A {Geobacillus stearothermophilus} PDB: 2ogs_A | Back alignment and structure |
|---|
Probab=98.89 E-value=4.4e-09 Score=89.11 Aligned_cols=121 Identities=12% Similarity=0.085 Sum_probs=80.0
Q ss_pred eCCCceEEEEeCC--CCCCCcEEEeccCC---CCCCC-CCcccccCCCC-cEEEEecCC----CCCCCCCCCC-----CC
Q 020064 29 VSDIHTIYWEQSG--NPTGHPVVFLHGGP---GGGTT-PSNRRFFDPDF-YRIILFDQR----GAGKSTPHAC-----LD 92 (331)
Q Consensus 29 ~~~g~~l~~~~~g--~~~~~~vl~~HG~~---~~~~~-~~~~~~~~~~g-~~vi~~D~~----G~G~s~~~~~-----~~ 92 (331)
..|+..+..+... ....|+||++||++ ++... ......++++| +.|+.+|+| |++.+..... ..
T Consensus 81 ~edcl~l~v~~P~~~~~~~Pviv~iHGGg~~~g~~~~~~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~~~~~~~~~~ 160 (498)
T 2ogt_A 81 SEDGLYLNIWSPAADGKKRPVLFWIHGGAFLFGSGSSPWYDGTAFAKHGDVVVVTINYRMNVFGFLHLGDSFGEAYAQAG 160 (498)
T ss_dssp BSCCCEEEEEESCSSSCCEEEEEEECCSTTTSCCTTCGGGCCHHHHHHHTCEEEEECCCCHHHHCCCCTTTTCGGGTTGG
T ss_pred CCCCcEEEEEecCCCCCCCcEEEEEcCCccCCCCCCCCcCCHHHHHhCCCEEEEeCCCcCchhhccCchhhccccccCCC
Confidence 3455556554332 12347899999976 33322 23344455555 999999999 8887764221 12
Q ss_pred ccchHHHHHHHHHHHHHh---C--CCcEEEEEeChhHHHHHHHHHhC--CCceeeEEEeccccc
Q 020064 93 QNTTWDLIDDIEKLRQHL---E--IPEWQVFGGSWGSTLALAYSLAH--PDKVTGLVLRGIFLL 149 (331)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~---~--~~~v~lvG~S~Gg~~a~~~a~~~--p~~v~~li~~~~~~~ 149 (331)
...+.|....+..+.+.+ + .++|.|+|+|.||.++..++... +..++++|+.++...
T Consensus 161 n~gl~D~~~al~wv~~~i~~fggdp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~~ 224 (498)
T 2ogt_A 161 NLGILDQVAALRWVKENIAAFGGDPDNITIFGESAGAASVGVLLSLPEASGLFRRAMLQSGSGS 224 (498)
T ss_dssp GHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTT
T ss_pred CcccHHHHHHHHHHHHHHHHhCCCCCeEEEEEECHHHHHHHHHHhcccccchhheeeeccCCcc
Confidence 234566666666666654 3 35899999999999998887754 457999999998654
|
| >4g4g_A 4-O-methyl-glucuronoyl methylesterase; alpha/beta hydrolase, 3-layer alpha/beta/alpha sandwich, ROS fold, glucuronoyl esterase; 1.55A {Myceliophthora thermophila} PDB: 4g4i_A 4g4j_A* | Back alignment and structure |
|---|
Probab=98.87 E-value=6.3e-08 Score=77.76 Aligned_cols=37 Identities=11% Similarity=-0.050 Sum_probs=31.9
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEecccc
Q 020064 111 EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFL 148 (331)
Q Consensus 111 ~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~ 148 (331)
+.++|.++|||+||..++.+++..+ ||+.+|..++..
T Consensus 217 D~~RIgv~G~S~gG~~Al~aaA~D~-Ri~~vi~~~sg~ 253 (433)
T 4g4g_A 217 DTKRLGVTGCSRNGKGAFITGALVD-RIALTIPQESGA 253 (433)
T ss_dssp EEEEEEEEEETHHHHHHHHHHHHCT-TCSEEEEESCCT
T ss_pred ChhHEEEEEeCCCcHHHHHHHhcCC-ceEEEEEecCCC
Confidence 4468999999999999999999876 899999887643
|
| >1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase directed evolution; 1.50A {Bacillus subtilis} SCOP: c.69.1.1 PDB: 1c7j_A 1c7i_A | Back alignment and structure |
|---|
Probab=98.86 E-value=4.3e-09 Score=88.94 Aligned_cols=104 Identities=16% Similarity=0.166 Sum_probs=69.7
Q ss_pred CCcEEEeccCC---CCCCC-CCcccccCCCC-cEEEEecCC----CCCCCCCCC--CCCccchHHHHHHHHHHHHHh---
Q 020064 45 GHPVVFLHGGP---GGGTT-PSNRRFFDPDF-YRIILFDQR----GAGKSTPHA--CLDQNTTWDLIDDIEKLRQHL--- 110 (331)
Q Consensus 45 ~~~vl~~HG~~---~~~~~-~~~~~~~~~~g-~~vi~~D~~----G~G~s~~~~--~~~~~~~~~~~~~~~~~~~~~--- 110 (331)
.|+||++||++ ++... ......++++| +.|+.+|+| |++.+.... ......+.|....+..+.+..
T Consensus 97 ~PviV~iHGGg~~~g~~~~~~~~~~~la~~g~~vvv~~nYRlg~~Gf~~~~~~~~~~~~n~gl~D~~~al~wv~~~i~~f 176 (489)
T 1qe3_A 97 LPVMVWIHGGAFYLGAGSEPLYDGSKLAAQGEVIVVTLNYRLGPFGFLHLSSFDEAYSDNLGLLDQAAALKWVRENISAF 176 (489)
T ss_dssp EEEEEEECCSTTTSCCTTSGGGCCHHHHHHHTCEEEEECCCCHHHHSCCCTTTCTTSCSCHHHHHHHHHHHHHHHHGGGG
T ss_pred CCEEEEECCCccccCCCCCcccCHHHHHhcCCEEEEecCccCcccccCccccccccCCCCcchHHHHHHHHHHHHHHHHh
Confidence 47899999965 22222 23344455554 999999999 666554211 112344566666665555543
Q ss_pred C--CCcEEEEEeChhHHHHHHHHHhC--CCceeeEEEecccc
Q 020064 111 E--IPEWQVFGGSWGSTLALAYSLAH--PDKVTGLVLRGIFL 148 (331)
Q Consensus 111 ~--~~~v~lvG~S~Gg~~a~~~a~~~--p~~v~~li~~~~~~ 148 (331)
+ .++|.|+|+|+||.++..++... ++.++++|+.++..
T Consensus 177 ggDp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 218 (489)
T 1qe3_A 177 GGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGAS 218 (489)
T ss_dssp TEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCC
T ss_pred CCCcceeEEEEechHHHHHHHHHhCccccchHHHHHHhCCCC
Confidence 3 34899999999999988887654 56899999999865
|
| >1whs_A Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1bcs_A* 1bcr_A* 1wht_A* 3sc2_A* | Back alignment and structure |
|---|
Probab=98.85 E-value=1.3e-07 Score=71.54 Aligned_cols=130 Identities=14% Similarity=0.228 Sum_probs=88.4
Q ss_pred CccceeEeC--CCceEEEEeCC----CCCCCcEEEeccCCCCCCCC-Cccc------------------ccCCCCcEEEE
Q 020064 22 YSTGILKVS--DIHTIYWEQSG----NPTGHPVVFLHGGPGGGTTP-SNRR------------------FFDPDFYRIIL 76 (331)
Q Consensus 22 ~~~~~~~~~--~g~~l~~~~~g----~~~~~~vl~~HG~~~~~~~~-~~~~------------------~~~~~g~~vi~ 76 (331)
....++.+. .+..++|+-.. +.+.|.+|+++||++.+..+ .... .-..+-..++-
T Consensus 19 ~~sGy~~v~~~~~~~lFywf~es~~~~~~~Pl~lwlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlf 98 (255)
T 1whs_A 19 MYSGYITVDEGAGRSLFYLLQEAPEDAQPAPLVLWLNGGPGCSSVAYGASEELGAFRVKPRGAGLVLNEYRWNKVANVLF 98 (255)
T ss_dssp EEEEEEEEETTTTEEEEEEEECCCGGGCSCCEEEEECCTTTBCTTTTHHHHTSSSEEECGGGCCEEECTTCGGGTSEEEE
T ss_pred EEEEEEECCCCCCcEEEEEEEEecCCCCCCCEEEEECCCCchHHHHHHHHhccCCeEecCCCCeeeeCcccccccCCEEE
Confidence 345677776 56788886443 23568899999998876654 2110 01124578999
Q ss_pred ecC-CCCCCCCCCCCCC--ccchHHHHHHHHHHHHH-------hCCCcEEEEEeChhHHHHHHHHHhC------CCceee
Q 020064 77 FDQ-RGAGKSTPHACLD--QNTTWDLIDDIEKLRQH-------LEIPEWQVFGGSWGSTLALAYSLAH------PDKVTG 140 (331)
Q Consensus 77 ~D~-~G~G~s~~~~~~~--~~~~~~~~~~~~~~~~~-------~~~~~v~lvG~S~Gg~~a~~~a~~~------p~~v~~ 140 (331)
+|. .|.|.|....... ..+.++.++|+..+++. +...+++|.|+|+||..+..+|..- .-.++|
T Consensus 99 iDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~inLkG 178 (255)
T 1whs_A 99 LDSPAGVGFSYTNTSSDIYTSGDNRTAHDSYAFLAKWFERFPHYKYRDFYIAGESYAGHYVPELSQLVHRSKNPVINLKG 178 (255)
T ss_dssp ECCSTTSTTCEESSGGGGGSCCHHHHHHHHHHHHHHHHHHCGGGTTCEEEEEEEETHHHHHHHHHHHHHHHTCSSCEEEE
T ss_pred EecCCCCccCCCcCccccccCCHHHHHHHHHHHHHHHHHhCHHhcCCCEEEEecCCccccHHHHHHHHHHcCCcccccce
Confidence 996 5999986443211 24566777777766653 3446899999999999988887642 236899
Q ss_pred EEEeccccchh
Q 020064 141 LVLRGIFLLRK 151 (331)
Q Consensus 141 li~~~~~~~~~ 151 (331)
+++.++.....
T Consensus 179 i~ign~~~d~~ 189 (255)
T 1whs_A 179 FMVGNGLIDDY 189 (255)
T ss_dssp EEEEEECCBHH
T ss_pred EEecCCccCHH
Confidence 99999877643
|
| >3pic_A CIP2; alpha/beta hydrolase fold, glucuronoyl esterase, carbohydrat esterase family 15 (CE-15), N-linked glycosylation, secrete hydrolase; HET: NAG; 1.90A {Hypocrea jecorina} | Back alignment and structure |
|---|
Probab=98.81 E-value=2.5e-07 Score=73.43 Aligned_cols=35 Identities=11% Similarity=-0.061 Sum_probs=30.8
Q ss_pred CcEEEEEeChhHHHHHHHHHhCCCceeeEEEecccc
Q 020064 113 PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFL 148 (331)
Q Consensus 113 ~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~ 148 (331)
++|.++|||+||..++.+++..+ ||+.+|...+..
T Consensus 185 ~RIgv~G~S~gG~~al~~aA~D~-Ri~~~v~~~~g~ 219 (375)
T 3pic_A 185 TKIGVTGCSRNGKGAMVAGAFEK-RIVLTLPQESGA 219 (375)
T ss_dssp EEEEEEEETHHHHHHHHHHHHCT-TEEEEEEESCCT
T ss_pred hhEEEEEeCCccHHHHHHHhcCC-ceEEEEeccCCC
Confidence 58999999999999999999886 899999887643
|
| >2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase; HET: TFC; 2.70A {Trichoplusia NI} | Back alignment and structure |
|---|
Probab=98.75 E-value=2.4e-08 Score=85.68 Aligned_cols=104 Identities=15% Similarity=0.135 Sum_probs=72.1
Q ss_pred CCcEEEeccCCC---CCC-CCCcccccCCCCcEEEEecCCC----CCCCCCCCCCCccchHHHHHHHHHHHHHh---C--
Q 020064 45 GHPVVFLHGGPG---GGT-TPSNRRFFDPDFYRIILFDQRG----AGKSTPHACLDQNTTWDLIDDIEKLRQHL---E-- 111 (331)
Q Consensus 45 ~~~vl~~HG~~~---~~~-~~~~~~~~~~~g~~vi~~D~~G----~G~s~~~~~~~~~~~~~~~~~~~~~~~~~---~-- 111 (331)
.|+||++|||+. +.. .......+++.|+.|+.+|+|. +..+..........+.|....+..+.+.+ +
T Consensus 115 ~Pviv~iHGGg~~~g~~~~~~~~~~~l~~~g~vvv~~nYRl~~~Gf~~~~~~~~~~n~gl~D~~~al~wv~~~i~~fggD 194 (551)
T 2fj0_A 115 LPVLVFIHGGGFAFGSGDSDLHGPEYLVSKDVIVITFNYRLNVYGFLSLNSTSVPGNAGLRDMVTLLKWVQRNAHFFGGR 194 (551)
T ss_dssp EEEEEEECCSTTTSCCSCTTTCBCTTGGGGSCEEEEECCCCHHHHHCCCSSSSCCSCHHHHHHHHHHHHHHHHTGGGTEE
T ss_pred CCEEEEEcCCccccCCCcccccCHHHHHhCCeEEEEeCCcCCccccccCcccCCCCchhHHHHHHHHHHHHHHHHHhCCC
Confidence 468999999542 222 2334556667899999999994 33332211112455677777776666653 3
Q ss_pred CCcEEEEEeChhHHHHHHHHHh--CCCceeeEEEecccc
Q 020064 112 IPEWQVFGGSWGSTLALAYSLA--HPDKVTGLVLRGIFL 148 (331)
Q Consensus 112 ~~~v~lvG~S~Gg~~a~~~a~~--~p~~v~~li~~~~~~ 148 (331)
.++|.|+|+|.||.++..++.. .+..++++|+.++..
T Consensus 195 p~~v~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 233 (551)
T 2fj0_A 195 PDDVTLMGQSAGAAATHILSLSKAADGLFRRAILMSGTS 233 (551)
T ss_dssp EEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCT
T ss_pred hhhEEEEEEChHHhhhhccccCchhhhhhhheeeecCCc
Confidence 3589999999999999988876 356899999998853
|
| >2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase; HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A* 1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A* 2hrq_A* 3k9b_A* 1k4y_A* | Back alignment and structure |
|---|
Probab=98.74 E-value=3.7e-08 Score=84.39 Aligned_cols=120 Identities=13% Similarity=0.092 Sum_probs=77.1
Q ss_pred eCCCceEEEEeCC-C---CCCCcEEEeccCCC---CCCCCCcccccCC-CCcEEEEecCC----CCCCCCCCCCCCccch
Q 020064 29 VSDIHTIYWEQSG-N---PTGHPVVFLHGGPG---GGTTPSNRRFFDP-DFYRIILFDQR----GAGKSTPHACLDQNTT 96 (331)
Q Consensus 29 ~~~g~~l~~~~~g-~---~~~~~vl~~HG~~~---~~~~~~~~~~~~~-~g~~vi~~D~~----G~G~s~~~~~~~~~~~ 96 (331)
..|...+...... . .+.|+||++|||+. +...+.. ..++. .|+.|+.+|+| |++.+..........+
T Consensus 95 ~edcl~lnv~~P~~~~~~~~~Pv~v~iHGG~~~~g~~~~~~~-~~la~~~g~vvv~~nYRlg~~gf~~~~~~~~~~n~gl 173 (542)
T 2h7c_A 95 SEDCLYLNIYTPADLTKKNRLPVMVWIHGGGLMVGAASTYDG-LALAAHENVVVVTIQYRLGIWGFFSTGDEHSRGNWGH 173 (542)
T ss_dssp ESCCCEEEEEECSCTTSCCCEEEEEEECCSTTTSCCSTTSCC-HHHHHHHTCEEEEECCCCHHHHHCCCSSTTCCCCHHH
T ss_pred CCCCcEEEEEECCCCCCCCCCCEEEEECCCcccCCCccccCH-HHHHhcCCEEEEecCCCCccccCCCCCcccCccchhH
Confidence 4565566544322 1 23468999999653 2222222 22333 79999999999 5554432222233456
Q ss_pred HHHHHHHHHHHHHh---C--CCcEEEEEeChhHHHHHHHHHh--CCCceeeEEEeccccc
Q 020064 97 WDLIDDIEKLRQHL---E--IPEWQVFGGSWGSTLALAYSLA--HPDKVTGLVLRGIFLL 149 (331)
Q Consensus 97 ~~~~~~~~~~~~~~---~--~~~v~lvG~S~Gg~~a~~~a~~--~p~~v~~li~~~~~~~ 149 (331)
.|+...+..+.+.+ + .++|.|+|+|.||.++..++.. .++.++++|+.++...
T Consensus 174 ~D~~~al~wv~~ni~~fggDp~~Vtl~G~SaGg~~~~~~~~~~~~~~lf~~ai~~Sg~~~ 233 (542)
T 2h7c_A 174 LDQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVAL 233 (542)
T ss_dssp HHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTT
T ss_pred HHHHHHHHHHHHHHHHcCCCccceEEEEechHHHHHHHHHhhhhhhHHHHHHhhhcCCcc
Confidence 66666666665553 3 3589999999999999988876 3668999999987654
|
| >4fol_A FGH, S-formylglutathione hydrolase; D-type esterase, oxidation sensor motif, esterase activity activation, esterase activity inhibition; 2.07A {Saccharomyces cerevisiae} PDB: 1pv1_A 3c6b_A* 4flm_A* | Back alignment and structure |
|---|
Probab=98.69 E-value=3.4e-07 Score=71.98 Aligned_cols=104 Identities=13% Similarity=0.027 Sum_probs=61.8
Q ss_pred CcEEEeccCCCCCCCCC----cccccCCCCcEEEEecCCCCCCC----------------CCCCC-----CCccch-HHH
Q 020064 46 HPVVFLHGGPGGGTTPS----NRRFFDPDFYRIILFDQRGAGKS----------------TPHAC-----LDQNTT-WDL 99 (331)
Q Consensus 46 ~~vl~~HG~~~~~~~~~----~~~~~~~~g~~vi~~D~~G~G~s----------------~~~~~-----~~~~~~-~~~ 99 (331)
|+|.++||.+++...|. ........+..++.+|..-.+.- ..... ...+.+ ..+
T Consensus 50 PVLYlLhG~~~~~~~w~~~~~~~~~~~~~~~~~v~p~~~p~~~~~~~~~~~~~~~g~~~~~y~d~~~~p~~~~~~~~~~l 129 (299)
T 4fol_A 50 PTVFYLSGLTCTPDNASEKAFWQFQADKYGFAIVFPDTSPRGDEVANDPEGSWDFGQGAGFYLNATQEPYAQHYQMYDYI 129 (299)
T ss_dssp CEEEEECCTTCCHHHHHHHSCHHHHHHHHTCEEEEECSSCCSTTSCCCTTCCSSSBTTBCTTCBCCSHHHHTTCBHHHHH
T ss_pred CEEEEECCCCCChHHHHHhchHhHHHHHcCchhhccCCCcceeecCCCcccccccccCCccccccccCccccCccHHHHH
Confidence 67889999776643221 12222335778888875321110 00000 001122 345
Q ss_pred HHHHHHHHHH-hC---------CCcEEEEEeChhHHHHHHHHHhC--CCceeeEEEeccccc
Q 020064 100 IDDIEKLRQH-LE---------IPEWQVFGGSWGSTLALAYSLAH--PDKVTGLVLRGIFLL 149 (331)
Q Consensus 100 ~~~~~~~~~~-~~---------~~~v~lvG~S~Gg~~a~~~a~~~--p~~v~~li~~~~~~~ 149 (331)
.+++..+++. +. .++..|.||||||.-|+.+|.++ |++..++...++...
T Consensus 130 ~~EL~~~i~~~f~~~~~r~~~~r~~~~i~G~SMGG~gAl~~al~~~~~~~~~~~~s~s~~~~ 191 (299)
T 4fol_A 130 HKELPQTLDSHFNKNGDVKLDFLDNVAITGISMGGYGAICGYLKGYSGKRYKSCSAFAPIVN 191 (299)
T ss_dssp HTHHHHHHHHHHCC-----BCSSSSEEEEEBTHHHHHHHHHHHHTGGGTCCSEEEEESCCCC
T ss_pred HHHhHHHHHHhcccccccccccccceEEEecCchHHHHHHHHHhCCCCCceEEEEecccccC
Confidence 6677766653 32 24689999999999999999986 567777777766443
|
| >2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod glycosylated protein, hydrolase; HET: NAG FUC SCK SCU P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A* 1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A* 2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A* 2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ... | Back alignment and structure |
|---|
Probab=98.65 E-value=7.5e-08 Score=82.52 Aligned_cols=120 Identities=13% Similarity=0.079 Sum_probs=76.3
Q ss_pred eCCCceEEEEeC-CCCC--CCcEEEeccCCC---CCCC-CCcccccCC-CCcEEEEecCC----CCCCCC-CCCCCCccc
Q 020064 29 VSDIHTIYWEQS-GNPT--GHPVVFLHGGPG---GGTT-PSNRRFFDP-DFYRIILFDQR----GAGKST-PHACLDQNT 95 (331)
Q Consensus 29 ~~~g~~l~~~~~-g~~~--~~~vl~~HG~~~---~~~~-~~~~~~~~~-~g~~vi~~D~~----G~G~s~-~~~~~~~~~ 95 (331)
..|...+..+.. +.++ .|+||++|||+. +... ......+++ .|+.|+.+|+| |++.+. .+.......
T Consensus 93 ~edcl~l~v~~P~~~~~~~~Pviv~iHGGg~~~g~~~~~~~~~~~la~~~g~vvv~~nYRlg~~Gf~~~~~~~~~~~n~g 172 (543)
T 2ha2_A 93 SEDCLYLNVWTPYPRPASPTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSREAPGNVG 172 (543)
T ss_dssp ESCCCEEEEEEESSCCSSCEEEEEEECCSTTTCCCTTSGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCTTCSSCCSCHH
T ss_pred CCcCCeEEEeecCCCCCCCCeEEEEECCCccccCCCCCCcCChHHHHhcCCEEEEEecccccccccccCCCCCCCCCccc
Confidence 456656654432 2212 378999999653 2221 222333443 69999999999 455442 111113445
Q ss_pred hHHHHHHHHHHHHHh---C--CCcEEEEEeChhHHHHHHHHHhC--CCceeeEEEecccc
Q 020064 96 TWDLIDDIEKLRQHL---E--IPEWQVFGGSWGSTLALAYSLAH--PDKVTGLVLRGIFL 148 (331)
Q Consensus 96 ~~~~~~~~~~~~~~~---~--~~~v~lvG~S~Gg~~a~~~a~~~--p~~v~~li~~~~~~ 148 (331)
+.|....+..+.+.+ + .++|.|+|+|.||.++..++... +..++++|+.++..
T Consensus 173 l~D~~~al~wv~~~i~~fggDp~~v~i~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 232 (543)
T 2ha2_A 173 LLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGTP 232 (543)
T ss_dssp HHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCCS
T ss_pred HHHHHHHHHHHHHHHHHhCCChhheEEEeechHHHHHHHHHhCcccHHhHhhheeccCCc
Confidence 667777776666654 3 35899999999999988777653 45799999998753
|
| >2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.63 E-value=2.6e-07 Score=87.76 Aligned_cols=90 Identities=20% Similarity=0.194 Sum_probs=61.7
Q ss_pred CCCcEEEeccCCCCCC-CCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCC-CcEEEEEeC
Q 020064 44 TGHPVVFLHGGPGGGT-TPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEI-PEWQVFGGS 121 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~-~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~lvG~S 121 (331)
..++++++|+.++... +..+...+ . .+.|++++.++ .+++++...+.+..+.. .++.++|||
T Consensus 1057 ~~~~L~~l~~~~g~~~~y~~la~~L-~-~~~v~~l~~~~--------------~~~~~~~~~~~i~~~~~~gp~~l~G~S 1120 (1304)
T 2vsq_A 1057 QEQIIFAFPPVLGYGLMYQNLSSRL-P-SYKLCAFDFIE--------------EEDRLDRYADLIQKLQPEGPLTLFGYS 1120 (1304)
T ss_dssp SCCEEECCCCTTCBGGGGHHHHTTC-C-SCEEEECBCCC--------------STTHHHHHHHHHHHHCCSSCEEEEEET
T ss_pred cCCcceeecccccchHHHHHHHhcc-c-ccceEeecccC--------------HHHHHHHHHHHHHHhCCCCCeEEEEec
Confidence 4667999999655543 33333333 4 78999888732 22344445555555543 589999999
Q ss_pred hhHHHHHHHHHhC---CCceeeEEEeccccc
Q 020064 122 WGSTLALAYSLAH---PDKVTGLVLRGIFLL 149 (331)
Q Consensus 122 ~Gg~~a~~~a~~~---p~~v~~li~~~~~~~ 149 (331)
+||.++..+|.+. ...+..++++++...
T Consensus 1121 ~Gg~lA~e~A~~L~~~g~~v~~l~lld~~~~ 1151 (1304)
T 2vsq_A 1121 AGCSLAFEAAKKLEEQGRIVQRIIMVDSYKK 1151 (1304)
T ss_dssp THHHHHHHHHHHHHHSSCCEEEEEEESCCEE
T ss_pred CCchHHHHHHHHHHhCCCceeEEEEecCccc
Confidence 9999999998764 456889999987543
|
| >1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase, neurotransmitter cleavage, catalytic triad, alpha/beta hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP: c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A* 1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A 1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A* 1vxr_A* ... | Back alignment and structure |
|---|
Probab=98.58 E-value=1.2e-07 Score=81.12 Aligned_cols=120 Identities=13% Similarity=0.060 Sum_probs=77.3
Q ss_pred eCCCceEEEEeC-CC-CCCCcEEEeccCCCC---CCC-CCcccccC-CCCcEEEEecCC----CCCCC-CCCCCCCccch
Q 020064 29 VSDIHTIYWEQS-GN-PTGHPVVFLHGGPGG---GTT-PSNRRFFD-PDFYRIILFDQR----GAGKS-TPHACLDQNTT 96 (331)
Q Consensus 29 ~~~g~~l~~~~~-g~-~~~~~vl~~HG~~~~---~~~-~~~~~~~~-~~g~~vi~~D~~----G~G~s-~~~~~~~~~~~ 96 (331)
..|...+..+.. +. ...|+||++|||+.. ... ......++ +.|+.|+.+++| |++.+ ..........+
T Consensus 91 sedcl~lnv~~P~~~~~~~Pv~v~iHGG~~~~g~~~~~~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~~~~~~n~gl 170 (537)
T 1ea5_A 91 SEDCLYLNIWVPSPRPKSTTVMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFLALHGSQEAPGNVGL 170 (537)
T ss_dssp CSCCCEEEEEECSSCCSSEEEEEEECCSTTTCCCTTCGGGCTHHHHHHHTCEEEECCCCCHHHHHCCCTTCSSSCSCHHH
T ss_pred CCcCCeEEEeccCCCCCCCeEEEEECCCcccCCCCCCCccChHHHHhcCCEEEEEeccCccccccccCCCCCCCcCcccc
Confidence 345556654432 22 234789999996532 222 12333444 579999999999 44444 11111134457
Q ss_pred HHHHHHHHHHHHHh---C--CCcEEEEEeChhHHHHHHHHHhC--CCceeeEEEecccc
Q 020064 97 WDLIDDIEKLRQHL---E--IPEWQVFGGSWGSTLALAYSLAH--PDKVTGLVLRGIFL 148 (331)
Q Consensus 97 ~~~~~~~~~~~~~~---~--~~~v~lvG~S~Gg~~a~~~a~~~--p~~v~~li~~~~~~ 148 (331)
.|....+..+.+.+ + .++|.|+|+|.||..+..++... +..++++|+.++..
T Consensus 171 ~D~~~al~wv~~ni~~fggdp~~vtl~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~ 229 (537)
T 1ea5_A 171 LDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSP 229 (537)
T ss_dssp HHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCT
T ss_pred HHHHHHHHHHHHHHHHhCCCccceEEEecccHHHHHHHHHhCccchhhhhhheeccCCc
Confidence 77777777766654 3 35899999999999998877652 45799999999864
|
| >1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A* 1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A* 3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A* 2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ... | Back alignment and structure |
|---|
Probab=98.58 E-value=1.2e-07 Score=81.16 Aligned_cols=120 Identities=12% Similarity=0.084 Sum_probs=76.6
Q ss_pred eCCCceEEEEe-CCC-CCCCcEEEeccCCC---CCCC-CCcccccCC-CCcEEEEecCC----CCCCCC-CCCCCCccch
Q 020064 29 VSDIHTIYWEQ-SGN-PTGHPVVFLHGGPG---GGTT-PSNRRFFDP-DFYRIILFDQR----GAGKST-PHACLDQNTT 96 (331)
Q Consensus 29 ~~~g~~l~~~~-~g~-~~~~~vl~~HG~~~---~~~~-~~~~~~~~~-~g~~vi~~D~~----G~G~s~-~~~~~~~~~~ 96 (331)
..|...+.... .+. .+.|+||++|||+. +... ......+++ .|+.|+.+++| |++.+. .+.......+
T Consensus 89 ~edcl~lnv~~P~~~~~~~Pv~v~iHGGg~~~g~~~~~~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~~~~~~n~gl 168 (529)
T 1p0i_A 89 SEDCLYLNVWIPAPKPKNATVLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFLALPGNPEAPGNMGL 168 (529)
T ss_dssp CSCCCEEEEEEESSCCSSEEEEEEECCSTTTSCCTTCGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCTTCTTSCSCHHH
T ss_pred CCcCCeEEEeeCCCCCCCCeEEEEECCCccccCCCCccccChHHHhccCCeEEEEecccccccccccCCCCCCCcCcccH
Confidence 34554555433 222 23478999999652 2222 122334444 69999999999 454441 1111123456
Q ss_pred HHHHHHHHHHHHHh---CC--CcEEEEEeChhHHHHHHHHHhC--CCceeeEEEecccc
Q 020064 97 WDLIDDIEKLRQHL---EI--PEWQVFGGSWGSTLALAYSLAH--PDKVTGLVLRGIFL 148 (331)
Q Consensus 97 ~~~~~~~~~~~~~~---~~--~~v~lvG~S~Gg~~a~~~a~~~--p~~v~~li~~~~~~ 148 (331)
.|....+..+.+.+ +. ++|.|+|+|.||.++..++... +..++++|+.++..
T Consensus 169 ~D~~~al~wv~~~i~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~ 227 (529)
T 1p0i_A 169 FDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSF 227 (529)
T ss_dssp HHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCT
T ss_pred HHHHHHHHHHHHHHHHhCCChhheEEeeccccHHHHHHHHhCccchHHHHHHHHhcCcc
Confidence 67777776666654 43 4899999999999998887764 45799999999864
|
| >4az3_A Lysosomal protective protein 32 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_A* | Back alignment and structure |
|---|
Probab=98.52 E-value=4e-06 Score=64.95 Aligned_cols=131 Identities=14% Similarity=0.135 Sum_probs=89.8
Q ss_pred CCccceeEeCCCceEEEEeCC----CCCCCcEEEeccCCCCCCCCCcccc------------cC------CCCcEEEEec
Q 020064 21 PYSTGILKVSDIHTIYWEQSG----NPTGHPVVFLHGGPGGGTTPSNRRF------------FD------PDFYRIILFD 78 (331)
Q Consensus 21 ~~~~~~~~~~~g~~l~~~~~g----~~~~~~vl~~HG~~~~~~~~~~~~~------------~~------~~g~~vi~~D 78 (331)
.....++++.++..++|+-.. +.+.|.||++.||++.+........ +. .+-..++-+|
T Consensus 22 ~~ysGyv~v~~~~~lFywf~es~~~p~~~Pl~lWlnGGPGcSS~~g~~~E~GP~~~~~~~~~l~~N~~sW~~~an~lfiD 101 (300)
T 4az3_A 22 RQYSGYLKGSGSKHLHYWFVESQKDPENSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYSWNLIANVLYLE 101 (300)
T ss_dssp CEEEEEEECSTTEEEEEEEECCSSCTTTSCEEEEECCTTTBCTHHHHHHTTSSEEECTTSSCEEECTTCGGGSSEEEEEC
T ss_pred ceeeeeeecCCCCeEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHHHHhcCCCceecCCCccccccCccHHhhhcchhhc
Confidence 344678999888899887543 3356789999999886553211110 00 1346799999
Q ss_pred CC-CCCCCCCCCCCCccchHHHHHHHHHHHHH-------hCCCcEEEEEeChhHHHHHHHHHhC----CCceeeEEEecc
Q 020064 79 QR-GAGKSTPHACLDQNTTWDLIDDIEKLRQH-------LEIPEWQVFGGSWGSTLALAYSLAH----PDKVTGLVLRGI 146 (331)
Q Consensus 79 ~~-G~G~s~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~v~lvG~S~Gg~~a~~~a~~~----p~~v~~li~~~~ 146 (331)
.| |.|.|.........+..+.++|+..++.. +...+++|.|.|+||..+..+|..- .-.++|+++-++
T Consensus 102 ~PvGtGfSy~~~~~~~~~~~~~a~d~~~fl~~f~~~fp~~~~~~~yi~GESY~G~yvP~~a~~i~~~~~inLkG~~iGNg 181 (300)
T 4az3_A 102 SPAGVGFSYSDDKFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGNG 181 (300)
T ss_dssp CSTTSTTCEETTCCCCCBHHHHHHHHHHHHHHHHHHCGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEESC
T ss_pred CCCcccccccCCCcccccchhhHHHHHHHHHHHHHhChhhcCCceEEEecCCceeeHHHHHHHHHhCCCcccccceecCC
Confidence 77 88888654433345666777777666643 2446899999999999988888653 225899999888
Q ss_pred ccchh
Q 020064 147 FLLRK 151 (331)
Q Consensus 147 ~~~~~ 151 (331)
.....
T Consensus 182 ~~d~~ 186 (300)
T 4az3_A 182 LSSYE 186 (300)
T ss_dssp CSBHH
T ss_pred ccCHH
Confidence 77643
|
| >1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H; HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=98.49 E-value=3.3e-07 Score=78.15 Aligned_cols=120 Identities=15% Similarity=0.073 Sum_probs=73.5
Q ss_pred eCCCceEEEEeC-CC---CCCCcEEEeccCCCC---CCCCCccccc--CCCCcEEEEecCC----CCCCCCCCC--CCCc
Q 020064 29 VSDIHTIYWEQS-GN---PTGHPVVFLHGGPGG---GTTPSNRRFF--DPDFYRIILFDQR----GAGKSTPHA--CLDQ 93 (331)
Q Consensus 29 ~~~g~~l~~~~~-g~---~~~~~vl~~HG~~~~---~~~~~~~~~~--~~~g~~vi~~D~~----G~G~s~~~~--~~~~ 93 (331)
..|...+..... +. ...|+||++|||+.. ...+...... ...|+.|+.+|+| |++.+.... ....
T Consensus 82 ~edcl~l~v~~P~~~~~~~~~Pviv~iHGGg~~~g~~~~~~~~~~~~~~~~g~vvv~~nYRlg~~Gf~~~~~~~~~~~~n 161 (522)
T 1ukc_A 82 SEDCLFINVFKPSTATSQSKLPVWLFIQGGGYAENSNANYNGTQVIQASDDVIVFVTFNYRVGALGFLASEKVRQNGDLN 161 (522)
T ss_dssp ESCCCEEEEEEETTCCTTCCEEEEEEECCSTTTSCCSCSCCCHHHHHHTTSCCEEEEECCCCHHHHHCCCHHHHHSSCTT
T ss_pred CCcCCEEEEEECCCCCCCCCCCEEEEECCCccccCCccccCcHHHHHhcCCcEEEEEecccccccccccchhccccCCCC
Confidence 445555554432 21 124789999996532 1112211111 2569999999999 555443210 0123
Q ss_pred cchHHHHHHHHHHHHHh---C--CCcEEEEEeChhHHHHHHHHHhC----CCceeeEEEecccc
Q 020064 94 NTTWDLIDDIEKLRQHL---E--IPEWQVFGGSWGSTLALAYSLAH----PDKVTGLVLRGIFL 148 (331)
Q Consensus 94 ~~~~~~~~~~~~~~~~~---~--~~~v~lvG~S~Gg~~a~~~a~~~----p~~v~~li~~~~~~ 148 (331)
..+.|....+..+.+.. + .++|.|+|+|.||..+..++... +..++++|+.++..
T Consensus 162 ~gl~D~~~al~wv~~ni~~fggDp~~v~i~G~SaGg~~v~~~l~~~~~~~~~lf~~~i~~sg~~ 225 (522)
T 1ukc_A 162 AGLLDQRKALRWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFW 225 (522)
T ss_dssp HHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCCC
T ss_pred hhHHHHHHHHHHHHHHHHHcCCCchhEEEEEEChHHHHHHHHHhCCCccccccchhhhhcCCCc
Confidence 45667777666666554 3 35899999999998776666543 56799999988754
|
| >2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A {Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A 1jmy_A | Back alignment and structure |
|---|
Probab=98.33 E-value=5.7e-07 Score=77.41 Aligned_cols=104 Identities=13% Similarity=0.136 Sum_probs=66.5
Q ss_pred CCcEEEeccCCC---CCCCC-------CcccccCC-CCcEEEEecCC----CCCCCCCCCCCCccchHHHHHHHHHHHHH
Q 020064 45 GHPVVFLHGGPG---GGTTP-------SNRRFFDP-DFYRIILFDQR----GAGKSTPHACLDQNTTWDLIDDIEKLRQH 109 (331)
Q Consensus 45 ~~~vl~~HG~~~---~~~~~-------~~~~~~~~-~g~~vi~~D~~----G~G~s~~~~~~~~~~~~~~~~~~~~~~~~ 109 (331)
.|+||++|||+. +.... .....++. .|+.|+.+++| |++.+..........+.|....+..+.+.
T Consensus 98 ~PV~v~iHGGg~~~Gs~~~~~~~~~~~~~~~~la~~~~vvvV~~nYRLg~~Gfl~~~~~~~pgn~gl~D~~~Al~wv~~n 177 (579)
T 2bce_A 98 LPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGPLGFLSTGDSNLPGNYGLWDQHMAIAWVKRN 177 (579)
T ss_dssp EEEEEECCCCSEEEC-------CTTGGGCCHHHHHHHTCEEEEECCCCHHHHHCCCSSTTCCCCHHHHHHHHHHHHHHHH
T ss_pred CeEEEEECCCcccCCCCCccccccccccChHHHhcCCCEEEEEeCCccccccCCcCCCCCCCCccchHHHHHHHHHHHHH
Confidence 478999999752 22111 11122322 47999999999 45444322211234567777777776665
Q ss_pred h---C--CCcEEEEEeChhHHHHHHHHHh--CCCceeeEEEecccc
Q 020064 110 L---E--IPEWQVFGGSWGSTLALAYSLA--HPDKVTGLVLRGIFL 148 (331)
Q Consensus 110 ~---~--~~~v~lvG~S~Gg~~a~~~a~~--~p~~v~~li~~~~~~ 148 (331)
+ + .++|.|+|+|.||.++..++.. ....++++|+.++..
T Consensus 178 i~~fGgDp~~Vti~G~SAGg~~~~~~~~~~~~~~lf~~ai~~Sg~~ 223 (579)
T 2bce_A 178 IEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGVG 223 (579)
T ss_dssp GGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESCCT
T ss_pred HHHhCCCcccEEEecccccchheeccccCcchhhHHHHHHHhcCCc
Confidence 4 3 3489999999999998887764 356789999887643
|
| >3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase, cell adhesion, cell J glycoprotein, membrane, postsynaptic cell membrane; HET: NAG; 1.80A {Rattus norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A* 2vh8_A 3bl8_A* | Back alignment and structure |
|---|
Probab=98.30 E-value=7.6e-07 Score=76.80 Aligned_cols=103 Identities=17% Similarity=0.173 Sum_probs=67.6
Q ss_pred CCcEEEeccCCCCCCC--CCcccccCC-CCcEEEEecCC----CCCCCCCCCCCCccchHHHHHHHHHHHHHh---C--C
Q 020064 45 GHPVVFLHGGPGGGTT--PSNRRFFDP-DFYRIILFDQR----GAGKSTPHACLDQNTTWDLIDDIEKLRQHL---E--I 112 (331)
Q Consensus 45 ~~~vl~~HG~~~~~~~--~~~~~~~~~-~g~~vi~~D~~----G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~---~--~ 112 (331)
.|+||++|||+..... ......+++ .++.|+.+|+| |+..+..........+.|....+..+.+.+ | .
T Consensus 131 ~Pv~v~iHGGg~~~g~~~~~~~~~la~~~~~vvv~~~YRl~~~Gfl~~~~~~~~~n~gl~D~~~al~wv~~ni~~fggdp 210 (574)
T 3bix_A 131 KPVMVYIHGGSYMEGTGNLYDGSVLASYGNVIVITVNYRLGVLGFLSTGDQAAKGNYGLLDLIQALRWTSENIGFFGGDP 210 (574)
T ss_dssp EEEEEECCCSSSSSCCGGGSCCHHHHHHHTCEEEEECCCCHHHHHCCCSSSSCCCCHHHHHHHHHHHHHHHHGGGGTEEE
T ss_pred CcEEEEECCCcccCCCCCccCchhhhccCCEEEEEeCCcCcccccCcCCCCCCCCcccHHHHHHHHHHHHHHHHHhCCCc
Confidence 4789999996532111 111223333 36999999999 343332221113456777777777776653 3 3
Q ss_pred CcEEEEEeChhHHHHHHHHHhCC---CceeeEEEeccc
Q 020064 113 PEWQVFGGSWGSTLALAYSLAHP---DKVTGLVLRGIF 147 (331)
Q Consensus 113 ~~v~lvG~S~Gg~~a~~~a~~~p---~~v~~li~~~~~ 147 (331)
++|.|+|+|.||.++..++.... ..+.++|+.++.
T Consensus 211 ~~vti~G~SaGg~~~~~~~~~~~~~~glf~~aI~~Sg~ 248 (574)
T 3bix_A 211 LRITVFGSGAGGSCVNLLTLSHYSEKGLFQRAIAQSGT 248 (574)
T ss_dssp EEEEEEEETHHHHHHHHHHTCTTSCTTSCCEEEEESCC
T ss_pred hhEEEEeecccHHHHHHHhhCCCcchhHHHHHHHhcCC
Confidence 47999999999999988887653 458888988753
|
| >1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse, membrane, nerve, muscle neurotransmitter degradation, glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A* | Back alignment and structure |
|---|
Probab=98.28 E-value=2.4e-06 Score=73.84 Aligned_cols=104 Identities=18% Similarity=0.148 Sum_probs=66.9
Q ss_pred CCcEEEeccCCC---CCCC-CCcccccCC-CCcEEEEecCC----CCCCCCC-------CCCCCccchHHHHHHHHHHHH
Q 020064 45 GHPVVFLHGGPG---GGTT-PSNRRFFDP-DFYRIILFDQR----GAGKSTP-------HACLDQNTTWDLIDDIEKLRQ 108 (331)
Q Consensus 45 ~~~vl~~HG~~~---~~~~-~~~~~~~~~-~g~~vi~~D~~----G~G~s~~-------~~~~~~~~~~~~~~~~~~~~~ 108 (331)
.|+||++|||+. +... ......+++ .|+.|+.+++| |++.... ........+.|+...++.+.+
T Consensus 141 ~PV~v~iHGGg~~~g~~~~~~~~~~~l~~~~~~vvv~~nYRlg~~Gfl~~~~~~~~~~~~~~~~n~gl~D~~~al~wv~~ 220 (585)
T 1dx4_A 141 LPILIWIYGGGFMTGSATLDIYNADIMAAVGNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNVGLWDQALAIRWLKD 220 (585)
T ss_dssp EEEEEEECCSTTTCCCTTCGGGCCHHHHHHHTCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcccCCCCCCCCCCchhhhccCCEEEEEecccccchhhcccccccccccCCCCCCcccHHHHHHHHHHHHH
Confidence 478999999653 2221 122233433 68999999999 4443211 111123456666666666655
Q ss_pred Hh---C--CCcEEEEEeChhHHHHHHHHHhC--CCceeeEEEecccc
Q 020064 109 HL---E--IPEWQVFGGSWGSTLALAYSLAH--PDKVTGLVLRGIFL 148 (331)
Q Consensus 109 ~~---~--~~~v~lvG~S~Gg~~a~~~a~~~--p~~v~~li~~~~~~ 148 (331)
.+ + .++|.|+|+|.||..+..++... ...++++|+.++..
T Consensus 221 ni~~fggDp~~vti~G~SaGg~~v~~~~~~~~~~~lf~~ai~~Sg~~ 267 (585)
T 1dx4_A 221 NAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTM 267 (585)
T ss_dssp STGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCCT
T ss_pred HHHHhCCCcceeEEeecchHHHHHHHHHhCCcccchhHhhhhhcccc
Confidence 43 3 34899999999999887776653 35799999998754
|
| >1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A {Galactomyces geotrichum} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=98.25 E-value=1.1e-06 Score=75.22 Aligned_cols=104 Identities=12% Similarity=0.004 Sum_probs=65.6
Q ss_pred CCcEEEeccCCCCCCCCCc--ccccC------CCCcEEEEecCCC----CCCCCCC--CCCCccchHHHHHHHHHHHHHh
Q 020064 45 GHPVVFLHGGPGGGTTPSN--RRFFD------PDFYRIILFDQRG----AGKSTPH--ACLDQNTTWDLIDDIEKLRQHL 110 (331)
Q Consensus 45 ~~~vl~~HG~~~~~~~~~~--~~~~~------~~g~~vi~~D~~G----~G~s~~~--~~~~~~~~~~~~~~~~~~~~~~ 110 (331)
.|+||++|||+........ ...++ ..|+.|+.+|+|. +..+... .......+.|....+..+.+.+
T Consensus 122 ~Pviv~iHGGg~~~g~~~~~~~~~l~~~~l~~~~~~vvv~~nYRl~~~gf~~~~~~~~~~~~n~gl~D~~~Al~wv~~ni 201 (544)
T 1thg_A 122 LPVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYRTGPFGFLGGDAITAEGNTNAGLHDQRKGLEWVSDNI 201 (544)
T ss_dssp EEEEEEECCCTTCCSGGGGCCSHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHTCTTHHHHHHHHHHHHHHHHG
T ss_pred CcEEEEECCCccccCCccccCchHHHHHHhhcCCCEEEEeCCCCCCcccCCCcccccccCCCchhHHHHHHHHHHHHHHH
Confidence 4689999997543221111 11111 2589999999994 2211100 0012345667777777666654
Q ss_pred ---C--CCcEEEEEeChhHHHHHHHHHhC--------CCceeeEEEecccc
Q 020064 111 ---E--IPEWQVFGGSWGSTLALAYSLAH--------PDKVTGLVLRGIFL 148 (331)
Q Consensus 111 ---~--~~~v~lvG~S~Gg~~a~~~a~~~--------p~~v~~li~~~~~~ 148 (331)
+ .++|.|+|+|.||.++..++... +..++++|+.++..
T Consensus 202 ~~fggDp~~Vti~G~SaGg~~~~~~~~~~~~~~~~~~~~lf~~~i~~Sg~~ 252 (544)
T 1thg_A 202 ANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGGP 252 (544)
T ss_dssp GGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCCC
T ss_pred HHhCCChhHeEEEEECHHHHHHHHHHhCCCccccccccccccceEEecccc
Confidence 3 35899999999999888777652 45789999998754
|
| >1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester acylh hydrolase; HET: NAG F23; 1.40A {Candida cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A* 1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A* 1gz7_A* | Back alignment and structure |
|---|
Probab=98.20 E-value=1.3e-06 Score=74.60 Aligned_cols=120 Identities=12% Similarity=-0.004 Sum_probs=71.2
Q ss_pred eCCCceEEEEeC-C-C--CCCCcEEEeccCCCCCCC---CCc---ccc--cCCCCcEEEEecCCC----CCCCCC--CCC
Q 020064 29 VSDIHTIYWEQS-G-N--PTGHPVVFLHGGPGGGTT---PSN---RRF--FDPDFYRIILFDQRG----AGKSTP--HAC 90 (331)
Q Consensus 29 ~~~g~~l~~~~~-g-~--~~~~~vl~~HG~~~~~~~---~~~---~~~--~~~~g~~vi~~D~~G----~G~s~~--~~~ 90 (331)
..|...+....- + . ...|+||++|||+..... +.. +.. ....|+.|+.+|+|. +..+.. ...
T Consensus 94 sedcl~l~v~~P~~~~~~~~~Pv~v~iHGGg~~~g~~~~~~~~~l~~~~~~~~~~~vvv~~nYRl~~~gf~~~~~~~~~~ 173 (534)
T 1llf_A 94 SEDCLTINVVRPPGTKAGANLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGDDIKAEG 173 (534)
T ss_dssp CSCCCEEEEEECTTCCTTCCEEEEEEECCSTTTSCCGGGSCCHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHT
T ss_pred CCCCeEEEEEECCCCCCCCCceEEEEEeCCCcccCCCcccCchHHHHHHHhcCCCEEEEEeCCCCCCCCCCCcccccccC
Confidence 345445554432 2 1 123789999996533221 111 111 123689999999994 221110 001
Q ss_pred CCccchHHHHHHHHHHHHHh---C--CCcEEEEEeChhHHHHHHHHHhC--------CCceeeEEEecccc
Q 020064 91 LDQNTTWDLIDDIEKLRQHL---E--IPEWQVFGGSWGSTLALAYSLAH--------PDKVTGLVLRGIFL 148 (331)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~---~--~~~v~lvG~S~Gg~~a~~~a~~~--------p~~v~~li~~~~~~ 148 (331)
.....+.|....+..+.+.+ + .++|.|+|+|.||..+..++... +..++++|+.++..
T Consensus 174 ~~n~gl~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~l~~~~~~~~~~~~~lf~~ai~~Sg~~ 244 (534)
T 1llf_A 174 SGNAGLKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGAM 244 (534)
T ss_dssp CTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCCS
T ss_pred CCchhHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHhHHHHHHHHcCCCccccccccchhHhHhhhccCc
Confidence 12345667777777766654 3 35899999999998777666553 45789999998753
|
| >4ebb_A Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2.00A {Homo sapiens} PDB: 3jyh_A* 3n0t_A* | Back alignment and structure |
|---|
Probab=98.11 E-value=4.7e-06 Score=69.97 Aligned_cols=81 Identities=23% Similarity=0.281 Sum_probs=66.2
Q ss_pred CCcEEEEecCCCCCCCCCCC-------CCCccchHHHHHHHHHHHHHhC------CCcEEEEEeChhHHHHHHHHHhCCC
Q 020064 70 DFYRIILFDQRGAGKSTPHA-------CLDQNTTWDLIDDIEKLRQHLE------IPEWQVFGGSWGSTLALAYSLAHPD 136 (331)
Q Consensus 70 ~g~~vi~~D~~G~G~s~~~~-------~~~~~~~~~~~~~~~~~~~~~~------~~~v~lvG~S~Gg~~a~~~a~~~p~ 136 (331)
.|-.+|..++|-+|.|.+.. .....+.++..+|+..+++.+. ..|++++|-|+||++|..+-.++|+
T Consensus 72 ~~a~~v~lEHRyYG~S~P~~~~st~~~nL~yLt~eQALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LaAW~R~kYP~ 151 (472)
T 4ebb_A 72 RGALLVFAEHRYYGKSLPFGAQSTQRGHTELLTVEQALADFAELLRALRRDLGAQDAPAIAFGGSYGGMLSAYLRMKYPH 151 (472)
T ss_dssp HTCEEEEECCTTSTTCCTTGGGGGSTTSCTTCSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEEETHHHHHHHHHHHHCTT
T ss_pred hCCeEEEEecccccCCcCCCCCCccccccccCCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEccCccchhhHHHHhhCCC
Confidence 46679999999999998632 1233678888889888887652 2489999999999999999999999
Q ss_pred ceeeEEEeccccch
Q 020064 137 KVTGLVLRGIFLLR 150 (331)
Q Consensus 137 ~v~~li~~~~~~~~ 150 (331)
.+.|.+.-+++...
T Consensus 152 lv~ga~ASSApv~a 165 (472)
T 4ebb_A 152 LVAGALAASAPVLA 165 (472)
T ss_dssp TCSEEEEETCCTTG
T ss_pred eEEEEEecccceEE
Confidence 99999998876654
|
| >1tib_A Lipase; hydrolase(carboxylic esterase); 1.84A {Thermomyces lanuginosus} SCOP: c.69.1.17 PDB: 1dt3_A 1dt5_A 1du4_A 1ein_A* 1dte_A 4dyh_A* 4ea6_A 1gt6_A* | Back alignment and structure |
|---|
Probab=98.04 E-value=1.6e-05 Score=61.59 Aligned_cols=96 Identities=10% Similarity=0.001 Sum_probs=56.0
Q ss_pred CCCcEEEeccCCCCCCCCCcccccCCCCcEEEE-ecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHh----CCCcEEEE
Q 020064 44 TGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIIL-FDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHL----EIPEWQVF 118 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~-~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~v~lv 118 (331)
.+..||.+||... ....+...++.+.. .|.++.+ ..... ....+..+.+++..+++.+ ...+++++
T Consensus 73 ~~~iVva~RGT~~------~~d~l~d~~~~~~~~~~~~~~~--~vh~G-f~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~ 143 (269)
T 1tib_A 73 NKLIVLSFRGSRS------IENWIGNLNFDLKEINDICSGC--RGHDG-FTSSWRSVADTLRQKVEDAVREHPDYRVVFT 143 (269)
T ss_dssp TTEEEEEECCCSC------THHHHTCCCCCEEECTTTSTTC--EEEHH-HHHHHHHHHHHHHHHHHHHHHHCTTSEEEEE
T ss_pred CCEEEEEEeCCCC------HHHHHHhcCeeeeecCCCCCCC--EecHH-HHHHHHHHHHHHHHHHHHHHHHCCCceEEEe
Confidence 4557888999542 23334455666666 5655421 11100 0123445556665555543 44589999
Q ss_pred EeChhHHHHHHHHHhCCC---ceeeEEEecccc
Q 020064 119 GGSWGSTLALAYSLAHPD---KVTGLVLRGIFL 148 (331)
Q Consensus 119 G~S~Gg~~a~~~a~~~p~---~v~~li~~~~~~ 148 (331)
||||||.+|..++..... .+..+++-+|..
T Consensus 144 GHSLGGalA~l~a~~l~~~~~~~~~~tfg~P~v 176 (269)
T 1tib_A 144 GHSLGGALATVAGADLRGNGYDIDVFSYGAPRV 176 (269)
T ss_dssp EETHHHHHHHHHHHHHTTSSSCEEEEEESCCCC
T ss_pred cCChHHHHHHHHHHHHHhcCCCeEEEEeCCCCC
Confidence 999999999999988643 355555544433
|
| >1gxs_A P-(S)-hydroxymandelonitrIle lyase chain A; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=97.99 E-value=0.00033 Score=53.51 Aligned_cols=128 Identities=16% Similarity=0.190 Sum_probs=77.9
Q ss_pred CccceeEeCC--CceEEEEeCC-----CCCCCcEEEeccCCCCCCCC-Ccccc------------c------CCCCcEEE
Q 020064 22 YSTGILKVSD--IHTIYWEQSG-----NPTGHPVVFLHGGPGGGTTP-SNRRF------------F------DPDFYRII 75 (331)
Q Consensus 22 ~~~~~~~~~~--g~~l~~~~~g-----~~~~~~vl~~HG~~~~~~~~-~~~~~------------~------~~~g~~vi 75 (331)
....++.+.+ +..++|+-.. +.+.|.+|+++||+|.+... ..... + -.+-..++
T Consensus 24 ~~sGyv~v~~~~~~~lFywf~es~~~~p~~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~SW~~~anll 103 (270)
T 1gxs_A 24 MYGGYVTIDDNNGRALYYWFQEADTADPAAAPLVLWLNGGPGCSSIGLGAMQELGAFRVHTNGESLLLNEYAWNKAANIL 103 (270)
T ss_dssp EEEEEEEEETTTTEEEEEEEECCCSSCGGGSCEEEEEECTTTBCTTTTHHHHTTSSEEECTTSSCEEECTTCGGGTSEEE
T ss_pred EEEEEEEcCCCCCcEEEEEEEEecCCCCCCCCEEEEecCCCcccchhhhhHHhccCceecCCCCcceeCccchhccccEE
Confidence 3456777753 5688876432 23467899999998876553 21110 1 01457899
Q ss_pred EecC-CCCCCCCCCCCC-CccchHHHHHHHHHHHHH-------hCCCcEEEEEeChhHHHHHHHHHh--C-----CCcee
Q 020064 76 LFDQ-RGAGKSTPHACL-DQNTTWDLIDDIEKLRQH-------LEIPEWQVFGGSWGSTLALAYSLA--H-----PDKVT 139 (331)
Q Consensus 76 ~~D~-~G~G~s~~~~~~-~~~~~~~~~~~~~~~~~~-------~~~~~v~lvG~S~Gg~~a~~~a~~--~-----p~~v~ 139 (331)
-+|. .|.|.|...... ...+.++.++|+..+++. +...+++|.|.| |-.+...+..- . .-.++
T Consensus 104 fiDqPvGtGfSy~~~~~~~~~~d~~~a~d~~~fl~~f~~~fp~~~~~~~yi~GES-G~yvP~la~~i~~~n~~~~~inLk 182 (270)
T 1gxs_A 104 FAESPAGVGFSYSNTSSDLSMGDDKMAQDTYTFLVKWFERFPHYNYREFYIAGES-GHFIPQLSQVVYRNRNNSPFINFQ 182 (270)
T ss_dssp EECCSTTSTTCEESSGGGGCCCHHHHHHHHHHHHHHHHHHCGGGTTSEEEEEEEC-TTHHHHHHHHHHHTTTTCTTCEEE
T ss_pred EEeccccccccCCCCCccccCCcHHHHHHHHHHHHHHHHhChhhcCCCEEEEeCC-CcchHHHHHHHHhccccccceeee
Confidence 9995 599998644311 122344556666555543 344689999999 65544433221 1 13589
Q ss_pred eEEEeccccch
Q 020064 140 GLVLRGIFLLR 150 (331)
Q Consensus 140 ~li~~~~~~~~ 150 (331)
|+++.++....
T Consensus 183 Gi~ign~~~d~ 193 (270)
T 1gxs_A 183 GLLVSSGLTND 193 (270)
T ss_dssp EEEEESCCCBH
T ss_pred eEEEeCCccCh
Confidence 99999987764
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=97.97 E-value=9.7e-07 Score=87.96 Aligned_cols=93 Identities=12% Similarity=0.103 Sum_probs=0.0
Q ss_pred CCCcEEEeccCCCC-CCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhC-CCcEEEEEeC
Q 020064 44 TGHPVVFLHGGPGG-GTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLE-IPEWQVFGGS 121 (331)
Q Consensus 44 ~~~~vl~~HG~~~~-~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~lvG~S 121 (331)
.+++++++|+.+++ ..+..+...+ . ..|+.+..+| .. ...+++++++++.+.+..+. ..++.++|||
T Consensus 2241 ~~~~Lfc~~~agG~~~~y~~l~~~l-~--~~v~~lq~pg----~~----~~~~i~~la~~~~~~i~~~~p~gpy~L~G~S 2309 (2512)
T 2vz8_A 2241 AERPLFLVHPIEGSITVFHGLAAKL-S--IPTYGLQCTG----AA----PLDSIQSLASYYIECIRQVQPEGPYRIAGYS 2309 (2512)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCeEEeCCccccHHHHHHHHHhh-C--CcEEEEecCC----CC----CCCCHHHHHHHHHHHHHHhCCCCCEEEEEEC
Confidence 35678999996555 3444444444 2 7888888887 11 13467778887776666654 3589999999
Q ss_pred hhHHHHHHHHHhCCC---cee---eEEEeccc
Q 020064 122 WGSTLALAYSLAHPD---KVT---GLVLRGIF 147 (331)
Q Consensus 122 ~Gg~~a~~~a~~~p~---~v~---~li~~~~~ 147 (331)
+||.+|..+|.+... .+. .++++++.
T Consensus 2310 ~Gg~lA~evA~~L~~~G~~v~~~~~L~llDg~ 2341 (2512)
T 2vz8_A 2310 YGACVAFEMCSQLQAQQSATPGNHSLFLFDGS 2341 (2512)
T ss_dssp --------------------------------
T ss_pred HhHHHHHHHHHHHHHcCCCCCccceEEEEeCc
Confidence 999999999876432 343 67777763
|
| >1whs_B Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1wht_B* 1bcs_B* 1bcr_B* 3sc2_B* | Back alignment and structure |
|---|
Probab=97.84 E-value=2.1e-05 Score=54.96 Aligned_cols=60 Identities=13% Similarity=0.086 Sum_probs=53.4
Q ss_pred cccEEEEecCCCCccCCcchHHHHHhCC------------------------CCcEEEecCCCCCCCcCCchhHHHHHHH
Q 020064 266 HINATIVQGRYDVCCPMMSAWDLHKAWP------------------------EADFKVVADAGHSANEPGIAAELVATNE 321 (331)
Q Consensus 266 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~gH~~~~~~~~~~~~~~i~ 321 (331)
.+++||.+|+.|.+++....+.+.+.+. +.++..+.++||++..++ |+...+.+.
T Consensus 64 girvlIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~vaG~~~~~~~Ltf~~V~~AGHmVP~dq-P~~a~~m~~ 142 (153)
T 1whs_B 64 GLRIWVFSGDTDAVVPLTATRYSIGALGLPTTTSWYPWYDDQEVGGWSQVYKGLTLVSVRGAGHEVPLHR-PRQALVLFQ 142 (153)
T ss_dssp TCEEEEEEETTCSSSCHHHHHHHHHTTTCCEEEEEEEEEETTEEEEEEEEETTEEEEEETTCCSSHHHHS-HHHHHHHHH
T ss_pred CceEEEEecCcCcccccHhHHHHHHhCCCCCcccccceeECCCccEEEEEeCeEEEEEECCCcccCcccC-HHHHHHHHH
Confidence 4899999999999999888888888774 567889999999999997 999999999
Q ss_pred HHHHh
Q 020064 322 KLKNL 326 (331)
Q Consensus 322 ~fl~~ 326 (331)
.|+..
T Consensus 143 ~fl~~ 147 (153)
T 1whs_B 143 YFLQG 147 (153)
T ss_dssp HHHHT
T ss_pred HHHCC
Confidence 99964
|
| >1tia_A Lipase; hydrolase(carboxylic esterase); 2.10A {Penicillium camemberti} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=97.65 E-value=0.00025 Score=55.19 Aligned_cols=83 Identities=14% Similarity=-0.035 Sum_probs=45.0
Q ss_pred CCCcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHH----HhCCCcEEEEE
Q 020064 44 TGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQ----HLEIPEWQVFG 119 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~v~lvG 119 (331)
.+..||.+||...... .+...++.+...|....|... .. ....+..+.+++...++ .....+++++|
T Consensus 73 ~~~iVvafRGT~~~~d------~~~d~~~~~~~~~~~~~~~vh--~G-f~~~~~~~~~~~~~~l~~~~~~~p~~~i~vtG 143 (279)
T 1tia_A 73 NSAVVLAFRGSYSVRN------WVADATFVHTNPGLCDGCLAE--LG-FWSSWKLVRDDIIKELKEVVAQNPNYELVVVG 143 (279)
T ss_pred CCEEEEEEeCcCCHHH------HHHhCCcEeecCCCCCCCccC--hh-HHHHHHHHHHHHHHHHHHHHHHCCCCeEEEEe
Confidence 4567889999543211 122234444444442212111 10 11223334444444443 33445899999
Q ss_pred eChhHHHHHHHHHhCC
Q 020064 120 GSWGSTLALAYSLAHP 135 (331)
Q Consensus 120 ~S~Gg~~a~~~a~~~p 135 (331)
||+||.+|..++....
T Consensus 144 HSLGGalA~l~a~~l~ 159 (279)
T 1tia_A 144 HSLGAAVATLAATDLR 159 (279)
T ss_pred cCHHHHHHHHHHHHHH
Confidence 9999999999988753
|
| >1tgl_A Triacyl-glycerol acylhydrolase; carboxylic esterase; 1.90A {Rhizomucor miehei} SCOP: c.69.1.17 PDB: 4tgl_A 5tgl_A* 3tgl_A | Back alignment and structure |
|---|
Probab=97.62 E-value=0.00019 Score=55.52 Aligned_cols=83 Identities=11% Similarity=0.045 Sum_probs=45.9
Q ss_pred CCCcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHh----CCCcEEEEE
Q 020064 44 TGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHL----EIPEWQVFG 119 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~v~lvG 119 (331)
+...|++.+-|+.+ +..+. .+..+...++||......... ....+..+.+++...++.+ ...+++++|
T Consensus 71 ~~~~ivv~frGT~~--~~dw~-----~d~~~~~~~~p~~~~~~vh~g-f~~~~~~l~~~~~~~l~~~~~~~p~~~i~~~G 142 (269)
T 1tgl_A 71 SEKTIYIVFRGSSS--IRNWI-----ADLTFVPVSYPPVSGTKVHKG-FLDSYGEVQNELVATVLDQFKQYPSYKVAVTG 142 (269)
T ss_pred CCCEEEEEECCCCC--HHHHH-----hhCceEeeeCCCCCCCEEcHH-HHHHHHHHHHHHHHHHHHHHHHCCCceEEEEe
Confidence 34556666665532 22221 255666677777421111110 1123444555554444433 334699999
Q ss_pred eChhHHHHHHHHHhC
Q 020064 120 GSWGSTLALAYSLAH 134 (331)
Q Consensus 120 ~S~Gg~~a~~~a~~~ 134 (331)
|||||.+|..+|...
T Consensus 143 HSLGgalA~l~a~~l 157 (269)
T 1tgl_A 143 HSLGGATALLCALDL 157 (269)
T ss_pred eCHHHHHHHHHHHHH
Confidence 999999999998766
|
| >1lgy_A Lipase, triacylglycerol lipase; hydrolase (carboxylic ester); 2.20A {Rhizopus niveus} SCOP: c.69.1.17 PDB: 1tic_A | Back alignment and structure |
|---|
Probab=97.23 E-value=0.0013 Score=50.77 Aligned_cols=38 Identities=18% Similarity=0.096 Sum_probs=26.9
Q ss_pred HHHHHHHHHHH----HHhCCCcEEEEEeChhHHHHHHHHHhC
Q 020064 97 WDLIDDIEKLR----QHLEIPEWQVFGGSWGSTLALAYSLAH 134 (331)
Q Consensus 97 ~~~~~~~~~~~----~~~~~~~v~lvG~S~Gg~~a~~~a~~~ 134 (331)
..+.+++...+ +.....++++.||||||.+|..++...
T Consensus 117 ~~~~~~~~~~l~~~~~~~~~~~i~vtGHSLGGalA~l~a~~~ 158 (269)
T 1lgy_A 117 EQVVNDYFPVVQEQLTAHPTYKVIVTGHSLGGAQALLAGMDL 158 (269)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCeEEEeccChHHHHHHHHHHHH
Confidence 33444444444 344456899999999999999998765
|
| >3hc7_A Gene 12 protein, GP12; alpha/beta sandwich, cell adhesion; 2.00A {Mycobacterium phage D29} | Back alignment and structure |
|---|
Probab=97.11 E-value=0.0027 Score=48.04 Aligned_cols=99 Identities=15% Similarity=0.073 Sum_probs=57.5
Q ss_pred CCCcEEEeccCCCCCC-----CCCcccccCCCCcEEEEe-cCCCCCCCCCCCCCCccchHH----HHHHHHHHHHHhCCC
Q 020064 44 TGHPVVFLHGGPGGGT-----TPSNRRFFDPDFYRIILF-DQRGAGKSTPHACLDQNTTWD----LIDDIEKLRQHLEIP 113 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~-----~~~~~~~~~~~g~~vi~~-D~~G~G~s~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 113 (331)
++|.||+.+|-..... ...+...+ ...+.+=.+ ++|-...+ ...+..+ +.+.+..........
T Consensus 2 ~~p~ii~ARGT~e~~~~GpG~~~~la~~l-~~~~~~q~Vg~YpA~~~~------y~~S~~~G~~~~~~~i~~~~~~CP~t 74 (254)
T 3hc7_A 2 SKPWLFTVHGTGQPDPLGPGLPADTARDV-LDIYRWQPIGNYPAAAFP------MWPSVEKGVAELILQIELKLDADPYA 74 (254)
T ss_dssp CCCEEEEECCTTCCCTTSSSHHHHHHTTS-TTTSEEEECCSCCCCSSS------CHHHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred CCCEEEEECCCCCCCCCCCCcHHHHHHHH-HHhcCCCccccccCcccC------ccchHHHHHHHHHHHHHHHHhhCCCC
Confidence 5788999999543211 12233333 333443333 35532211 1123333 333344444445567
Q ss_pred cEEEEEeChhHHHHHHHHHh-----------CCCceeeEEEeccccc
Q 020064 114 EWQVFGGSWGSTLALAYSLA-----------HPDKVTGLVLRGIFLL 149 (331)
Q Consensus 114 ~v~lvG~S~Gg~~a~~~a~~-----------~p~~v~~li~~~~~~~ 149 (331)
+++|.|+|.|+.++-.++.. ..++|.++++++-+..
T Consensus 75 kiVL~GYSQGA~V~~~~l~~~i~~~~g~~~~~~~~V~avvlfGdP~r 121 (254)
T 3hc7_A 75 DFAMAGYSQGAIVVGQVLKHHILPPTGRLHRFLHRLKKVIFWGNPMR 121 (254)
T ss_dssp CEEEEEETHHHHHHHHHHHHHTSSTTCTTGGGGGGEEEEEEESCTTC
T ss_pred eEEEEeeCchHHHHHHHHHhhccCCCCCchhhhhhEEEEEEEeCCCC
Confidence 99999999999999888755 2357999999886554
|
| >4az3_B Lysosomal protective protein 20 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_B* | Back alignment and structure |
|---|
Probab=97.06 E-value=0.00075 Score=47.23 Aligned_cols=66 Identities=14% Similarity=0.189 Sum_probs=52.5
Q ss_pred hhccccccccEEEEecCCCCccCCcchHHHHHhCC-----------------------------CCcEEEecCCCCCCCc
Q 020064 259 DNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWP-----------------------------EADFKVVADAGHSANE 309 (331)
Q Consensus 259 ~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~gH~~~~ 309 (331)
..|..- .+++||.+|+.|.+++.-..+.+.+.+. +.+++.+.+|||++..
T Consensus 57 ~~Ll~~-girVliy~Gd~D~icn~~G~~~~i~~L~w~~~~~~~~w~~~~~~~~~~vaG~~~~~~nLtf~~V~~AGHmVP~ 135 (155)
T 4az3_B 57 KLLSSQ-KYQILLYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLVKYGDSGEQIAGFVKEFSHIAFLTIKGAGHMVPT 135 (155)
T ss_dssp HHHHTC-CCEEEEEEETTCSSSCHHHHHHHHHHTCCSSCCCCEEEEEEETTTEEEEEEEEEEETTEEEEEETTCCSCHHH
T ss_pred HHHHHc-CceEEEEecccCcccCcHhHHHHHHhcccccccccccceeecccCCCEEEEEEEEeCCEEEEEECCCcCcChh
Confidence 344444 4899999999999999877777766551 2246778899999999
Q ss_pred CCchhHHHHHHHHHHHh
Q 020064 310 PGIAAELVATNEKLKNL 326 (331)
Q Consensus 310 ~~~~~~~~~~i~~fl~~ 326 (331)
++ |+...+.+.+||..
T Consensus 136 dq-P~~al~m~~~fl~g 151 (155)
T 4az3_B 136 DK-PLAAFTMFSRFLNK 151 (155)
T ss_dssp HC-HHHHHHHHHHHHTT
T ss_pred hC-HHHHHHHHHHHHcC
Confidence 97 99999999999864
|
| >1uwc_A Feruloyl esterase A; hydrolase, serine esterase, xylan degradation; HET: NAG FER; 1.08A {Aspergillus niger} SCOP: c.69.1.17 PDB: 1uza_A* 2hl6_A* 2ix9_A* 1usw_A* 2bjh_A* | Back alignment and structure |
|---|
Probab=97.03 E-value=0.0022 Score=49.27 Aligned_cols=44 Identities=20% Similarity=0.129 Sum_probs=30.0
Q ss_pred HHHHHHHhCCCcEEEEEeChhHHHHHHHHHhC---CCceeeEEEeccc
Q 020064 103 IEKLRQHLEIPEWQVFGGSWGSTLALAYSLAH---PDKVTGLVLRGIF 147 (331)
Q Consensus 103 ~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~---p~~v~~li~~~~~ 147 (331)
+..+++.....++++.|||+||.+|..++... ..++. ++..+++
T Consensus 115 l~~~~~~~p~~~i~vtGHSLGGalA~l~a~~l~~~~~~v~-~~tFg~P 161 (261)
T 1uwc_A 115 VKQQASQYPDYALTVTGHSLGASMAALTAAQLSATYDNVR-LYTFGEP 161 (261)
T ss_dssp HHHHHHHSTTSEEEEEEETHHHHHHHHHHHHHHTTCSSEE-EEEESCC
T ss_pred HHHHHHHCCCceEEEEecCHHHHHHHHHHHHHhccCCCeE-EEEecCC
Confidence 33444444556899999999999999888764 23565 5555544
|
| >3g7n_A Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A {Penicillium expansum} | Back alignment and structure |
|---|
Probab=97.02 E-value=0.0025 Score=48.71 Aligned_cols=34 Identities=21% Similarity=0.238 Sum_probs=25.6
Q ss_pred HHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHh
Q 020064 100 IDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLA 133 (331)
Q Consensus 100 ~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~ 133 (331)
.+.+..+++.....++++.|||+||.+|..++..
T Consensus 111 ~~~l~~~~~~~p~~~i~vtGHSLGGalA~l~a~~ 144 (258)
T 3g7n_A 111 ITEVKALIAKYPDYTLEAVGHSLGGALTSIAHVA 144 (258)
T ss_dssp HHHHHHHHHHSTTCEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCeEEEeccCHHHHHHHHHHHH
Confidence 3344455555555689999999999999988765
|
| >3uue_A LIP1, secretory lipase (family 3); LID-domain, hydrolase; HET: NAG BMA MAN; 1.45A {Malassezia globosa} PDB: 3uuf_A* | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0033 Score=48.74 Aligned_cols=50 Identities=16% Similarity=0.236 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHh----CCCceeeEEEecccc
Q 020064 99 LIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLA----HPDKVTGLVLRGIFL 148 (331)
Q Consensus 99 ~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~----~p~~v~~li~~~~~~ 148 (331)
+.+.+..+++.....++++.|||+||.+|..+|.. .|.....++..+++.
T Consensus 124 ~~~~l~~~~~~~p~~~l~vtGHSLGGalA~l~a~~l~~~~~~~~~~~~tfg~Pr 177 (279)
T 3uue_A 124 IFTAVKKYKKEKNEKRVTVIGHSLGAAMGLLCAMDIELRMDGGLYKTYLFGLPR 177 (279)
T ss_dssp HHHHHHHHHHHHTCCCEEEEEETHHHHHHHHHHHHHHHHSTTCCSEEEEESCCC
T ss_pred HHHHHHHHHHhCCCceEEEcccCHHHHHHHHHHHHHHHhCCCCceEEEEecCCC
Confidence 33444455555566789999999999999988865 344444555555543
|
| >3qpa_A Cutinase; alpha-beta hydrolase fold, esterase, hydrolase, mono- phosphorylated serine residue, secreted; HET: MIR; 0.85A {Nectria haematococca} PDB: 3qpc_A* 1cex_A 1oxm_A* 1cui_A 1cus_A 2cut_A 1cuj_A 1cuy_A 1xzl_A* 1xzk_A* 1xzm_A* 1cuh_A 1cuu_A 3esc_A* 1cua_A* 3esa_A* 3esb_A* 3ef3_A* 3esd_A* 1cux_A ... | Back alignment and structure |
|---|
Probab=96.75 E-value=0.0073 Score=43.64 Aligned_cols=79 Identities=18% Similarity=0.045 Sum_probs=53.4
Q ss_pred CCcEEEEe--cCCCCCCCC-CCCCCCccchHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCC----CceeeEE
Q 020064 70 DFYRIILF--DQRGAGKST-PHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHP----DKVTGLV 142 (331)
Q Consensus 70 ~g~~vi~~--D~~G~G~s~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p----~~v~~li 142 (331)
....|..+ +||-.-... ...........++...+..........+++|+|+|.|+.++-.++...| ++|.+++
T Consensus 51 ~~v~v~~V~~~YpA~~~~~~~~~~S~~~G~~~~~~~i~~~~~~CP~tkiVL~GYSQGA~V~~~~~~~l~~~~~~~V~avv 130 (197)
T 3qpa_A 51 DGVWIQGVGGAYRATLGDNALPRGTSSAAIREMLGLFQQANTKCPDATLIAGGYXQGAALAAASIEDLDSAIRDKIAGTV 130 (197)
T ss_dssp TTEEEEECCTTCCCCGGGGGSTTSSCHHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHSCHHHHTTEEEEE
T ss_pred CceEEEeeCCCCcCCCCcccCccccHHHHHHHHHHHHHHHHHhCCCCcEEEEecccccHHHHHHHhcCCHhHHhheEEEE
Confidence 45778888 787532111 0000012234556666666667777789999999999999988877665 6899999
Q ss_pred Eecccc
Q 020064 143 LRGIFL 148 (331)
Q Consensus 143 ~~~~~~ 148 (331)
+++-+.
T Consensus 131 lfGdP~ 136 (197)
T 3qpa_A 131 LFGYTK 136 (197)
T ss_dssp EESCTT
T ss_pred EeeCCc
Confidence 998643
|
| >1gxs_B P-(S)-hydroxymandelonitrIle lyase chain B; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=96.66 E-value=0.0026 Score=44.63 Aligned_cols=60 Identities=17% Similarity=0.131 Sum_probs=49.9
Q ss_pred cccEEEEecCCCCccCCcchHHHHHhCC---------------------------CCcEEEecCCCCCCCcCCchhHHHH
Q 020064 266 HINATIVQGRYDVCCPMMSAWDLHKAWP---------------------------EADFKVVADAGHSANEPGIAAELVA 318 (331)
Q Consensus 266 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~gH~~~~~~~~~~~~~ 318 (331)
..++||.+|+.|.+|+.-..+.+.+.+. +.++..+.++||++..++ |+...+
T Consensus 66 girVliysGd~D~i~~~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~~vaG~~~~~~nLtf~~V~~AGHmVP~dq-P~~al~ 144 (158)
T 1gxs_B 66 GLRVWVYSGDTDSVVPVSSTRRSLAALELPVKTSWYPWYMAPTEREVGGWSVQYEGLTYVTVRGAGHLVPVHR-PAQAFL 144 (158)
T ss_dssp TCEEEEEEETTCSSSCHHHHHHHHHTTCCCEEEEEEEEESSTTCCSEEEEEEEETTEEEEEETTCCSSHHHHC-HHHHHH
T ss_pred CCeEEEEecccCccCCcHHHHHHHHHCCCcccCCccceEECCCCCcccceEEEeCCEEEEEECCCcccCcccC-cHHHHH
Confidence 4899999999999999877776666551 134667899999999997 999999
Q ss_pred HHHHHHHh
Q 020064 319 TNEKLKNL 326 (331)
Q Consensus 319 ~i~~fl~~ 326 (331)
.+.+|+..
T Consensus 145 m~~~fl~g 152 (158)
T 1gxs_B 145 LFKQFLKG 152 (158)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHcC
Confidence 99999964
|
| >3ngm_A Extracellular lipase; secret lipase, hydrolase; 2.80A {Gibberella zeae} | Back alignment and structure |
|---|
Probab=96.66 E-value=0.0026 Score=50.11 Aligned_cols=30 Identities=20% Similarity=0.082 Sum_probs=22.7
Q ss_pred HHHHHHhCCCcEEEEEeChhHHHHHHHHHh
Q 020064 104 EKLRQHLEIPEWQVFGGSWGSTLALAYSLA 133 (331)
Q Consensus 104 ~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~ 133 (331)
..+++.....++++.|||+||.+|..++..
T Consensus 127 ~~~~~~~p~~~i~vtGHSLGGAlA~L~a~~ 156 (319)
T 3ngm_A 127 AKARKANPSFKVVSVGHSLGGAVATLAGAN 156 (319)
T ss_dssp HHHHHSSTTCEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHhhCCCCceEEeecCHHHHHHHHHHHH
Confidence 333333445689999999999999988775
|
| >3o0d_A YALI0A20350P, triacylglycerol lipase; alpha/beta-hydrolase, lipids binding, glycosylation, extracellular, hydrolase; HET: NAG; 1.70A {Yarrowia lipolytica} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=96.65 E-value=0.0032 Score=49.34 Aligned_cols=36 Identities=17% Similarity=0.223 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhC
Q 020064 99 LIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAH 134 (331)
Q Consensus 99 ~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~ 134 (331)
+.+.+..+++.....++++.|||+||.+|..+|...
T Consensus 140 i~~~l~~~~~~~p~~~i~vtGHSLGGalA~l~a~~l 175 (301)
T 3o0d_A 140 IGPKLDSVIEQYPDYQIAVTGHSLGGAAALLFGINL 175 (301)
T ss_dssp HHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCceEEEeccChHHHHHHHHHHHH
Confidence 334455555555557899999999999999888753
|
| >3dcn_A Cutinase, cutin hydrolase; catalytic triad, secreted, serine esterase; 1.90A {Glomerella cingulata} SCOP: c.69.1.0 PDB: 3dd5_A 3dea_A* | Back alignment and structure |
|---|
Probab=96.37 E-value=0.011 Score=42.94 Aligned_cols=78 Identities=10% Similarity=-0.074 Sum_probs=52.1
Q ss_pred CCcEEEEe--cCCCCCCCC-CCCCCCccchHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCC----CceeeEE
Q 020064 70 DFYRIILF--DQRGAGKST-PHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHP----DKVTGLV 142 (331)
Q Consensus 70 ~g~~vi~~--D~~G~G~s~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p----~~v~~li 142 (331)
+...|..+ +||-.-... ........-..++...+..........+++|+|+|.|+.++-.++...| ++|.+++
T Consensus 59 ~~v~v~~V~~~YpA~~~~~~~~~~S~~~G~~~~~~~i~~~~~~CP~tkiVL~GYSQGA~V~~~~~~~l~~~~~~~V~avv 138 (201)
T 3dcn_A 59 NDVWVQGVGGPYLADLASNFLPDGTSSAAINEARRLFTLANTKCPNAAIVSGGYSQGTAVMAGSISGLSTTIKNQIKGVV 138 (201)
T ss_dssp GGEEEEECCTTCCCCSGGGGSTTSSCHHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHTTSCHHHHHHEEEEE
T ss_pred CceEEEEeCCCccccCCcccccCCCHHHHHHHHHHHHHHHHHhCCCCcEEEEeecchhHHHHHHHhcCChhhhhheEEEE
Confidence 45678888 677432110 0000012234566666666677777789999999999999988876655 5799999
Q ss_pred Eeccc
Q 020064 143 LRGIF 147 (331)
Q Consensus 143 ~~~~~ 147 (331)
+++-+
T Consensus 139 lfGdP 143 (201)
T 3dcn_A 139 LFGYT 143 (201)
T ss_dssp EETCT
T ss_pred EeeCc
Confidence 98854
|
| >1g66_A Acetyl xylan esterase II; serine hydrolase, acetyl xylopyranose, hydrolase; 0.90A {Penicillium purpurogenum} SCOP: c.69.1.30 PDB: 1bs9_A 2axe_A* | Back alignment and structure |
|---|
Probab=96.02 E-value=0.022 Score=41.87 Aligned_cols=79 Identities=9% Similarity=0.036 Sum_probs=46.4
Q ss_pred CcEEEEecCCCC-CCCCCCCCCCccchH----HHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHh------------
Q 020064 71 FYRIILFDQRGA-GKSTPHACLDQNTTW----DLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLA------------ 133 (331)
Q Consensus 71 g~~vi~~D~~G~-G~s~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~------------ 133 (331)
+-.+..++||-. |.+.........+.. ++...+....+.....+++|+|+|.|+.++-.++..
T Consensus 35 g~~~~~V~YpA~~~~~~~~~~~y~~S~~~G~~~~~~~i~~~~~~CP~tkivl~GYSQGA~V~~~~~~~~~~~~~~i~~~~ 114 (207)
T 1g66_A 35 GSTAEAINYPACGGQSSCGGASYSSSVAQGIAAVASAVNSFNSQCPSTKIVLVGYSQGGEIMDVALCGGGDPNQGYTNTA 114 (207)
T ss_dssp TCEEEECCCCCCSSCGGGTSCCHHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEEETHHHHHHHHHHHCSCBGGGTBCCCS
T ss_pred CCceEEeeccccccccccCCcchhhhHHHHHHHHHHHHHHHHHhCCCCcEEEEeeCchHHHHHHHHhcccccccccccCC
Confidence 346788888864 221110000111222 333344444444556799999999999999888741
Q ss_pred --CC----CceeeEEEeccccc
Q 020064 134 --HP----DKVTGLVLRGIFLL 149 (331)
Q Consensus 134 --~p----~~v~~li~~~~~~~ 149 (331)
.| ++|.++++++-+..
T Consensus 115 ~~l~~~~~~~V~avvlfGdP~~ 136 (207)
T 1g66_A 115 VQLSSSAVNMVKAAIFMGDPMF 136 (207)
T ss_dssp CCSCHHHHHHEEEEEEESCTTC
T ss_pred CCCChhhhccEEEEEEEcCCCc
Confidence 22 46888888886543
|
| >3qpd_A Cutinase 1; alpha-beta hydrolase fold, esterase, hydrolase, mono- phosphorylated serine residue, secreted, phosphorylated Ser residue; HET: SEP; 1.57A {Aspergillus oryzae} PDB: 3gbs_A | Back alignment and structure |
|---|
Probab=95.88 E-value=0.029 Score=40.23 Aligned_cols=80 Identities=15% Similarity=-0.043 Sum_probs=50.7
Q ss_pred CCCcEEEEec--CCCCCCCC-CCCCCCccchHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCC----CceeeE
Q 020064 69 PDFYRIILFD--QRGAGKST-PHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHP----DKVTGL 141 (331)
Q Consensus 69 ~~g~~vi~~D--~~G~G~s~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p----~~v~~l 141 (331)
.....|..++ ||-.-... .......-...+....+....+.....+++|+|+|.|+.++-.++...| ++|.++
T Consensus 46 ~~~v~v~~V~~~YpA~~~~~~~~~~s~~~g~~~~~~~i~~~~~~CP~tkivl~GYSQGA~V~~~~~~~l~~~~~~~V~av 125 (187)
T 3qpd_A 46 SGDVACQGVGPRYTADLPSNALPEGTSQAAIAEAQGLFEQAVSKCPDTQIVAGGYSQGTAVMNGAIKRLSADVQDKIKGV 125 (187)
T ss_dssp TTCEEEEECCSSCCCCGGGGGSTTSSCHHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHTTSCHHHHHHEEEE
T ss_pred CCCceEEeeCCcccCcCccccccccchhHHHHHHHHHHHHHHHhCCCCcEEEEeeccccHHHHhhhhcCCHhhhhhEEEE
Confidence 4457788888 87532100 0000001123334444455556667789999999999999998876655 579999
Q ss_pred EEecccc
Q 020064 142 VLRGIFL 148 (331)
Q Consensus 142 i~~~~~~ 148 (331)
++++-+.
T Consensus 126 vlfGdP~ 132 (187)
T 3qpd_A 126 VLFGYTR 132 (187)
T ss_dssp EEESCTT
T ss_pred EEeeCCc
Confidence 9988543
|
| >1qoz_A AXE, acetyl xylan esterase; hydrolase, xylan degradation; HET: NAG; 1.90A {Trichoderma reesei} SCOP: c.69.1.30 | Back alignment and structure |
|---|
Probab=95.84 E-value=0.029 Score=41.23 Aligned_cols=76 Identities=9% Similarity=-0.056 Sum_probs=46.2
Q ss_pred CcEEEEecCCCCC-CCCCCCCCCcc--ch----HHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHh----------
Q 020064 71 FYRIILFDQRGAG-KSTPHACLDQN--TT----WDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLA---------- 133 (331)
Q Consensus 71 g~~vi~~D~~G~G-~s~~~~~~~~~--~~----~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~---------- 133 (331)
|-.+..+++|-.. .+.... ..| +. .++...+....+.....+++|+|+|.|+.++-.++..
T Consensus 35 g~~~~~V~YpA~~~~~~~~~--~~y~~S~~~G~~~~~~~i~~~~~~CP~tkivl~GYSQGA~V~~~~~~~~~~~~~~i~~ 112 (207)
T 1qoz_A 35 GTTSEAIVYPACGGQASCGG--ISYANSVVNGTNAAAAAINNFHNSCPDTQLVLVGYSQGAQIFDNALCGGGDPGEGITN 112 (207)
T ss_dssp TEEEEECCSCCCSSCGGGTT--CCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHCSCBGGGTBCC
T ss_pred CCceEEeeccccccccccCC--ccccccHHHHHHHHHHHHHHHHhhCCCCcEEEEEeCchHHHHHHHHhccCcccccccC
Confidence 4467788888642 211000 112 22 2333444444445556799999999999999888741
Q ss_pred ----CC----CceeeEEEecccc
Q 020064 134 ----HP----DKVTGLVLRGIFL 148 (331)
Q Consensus 134 ----~p----~~v~~li~~~~~~ 148 (331)
.| ++|.++++++-+.
T Consensus 113 ~~~~l~~~~~~~V~avvlfGdP~ 135 (207)
T 1qoz_A 113 TAVPLTAGAVSAVKAAIFMGDPR 135 (207)
T ss_dssp CSCCSCHHHHHHEEEEEEESCTT
T ss_pred CCCCCChHHhccEEEEEEEcCCc
Confidence 12 4688888888654
|
| >2czq_A Cutinase-like protein; alpha/beta hydrolase fold, hydrolase; HET: CIT; 1.05A {Cryptococcus SP} | Back alignment and structure |
|---|
Probab=95.60 E-value=0.023 Score=41.56 Aligned_cols=53 Identities=21% Similarity=0.084 Sum_probs=38.3
Q ss_pred hHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhC--C----CceeeEEEecccc
Q 020064 96 TWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAH--P----DKVTGLVLRGIFL 148 (331)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~--p----~~v~~li~~~~~~ 148 (331)
..++...|....++....+++|+|+|.|+.++-.++... | ++|.++++++-+.
T Consensus 60 ~~~~~~~i~~~~~~CP~tkivl~GYSQGA~V~~~~~~~lg~~~~~~~~V~avvlfGdP~ 118 (205)
T 2czq_A 60 TADIIRRINSGLAANPNVCYILQGYSQGAAATVVALQQLGTSGAAFNAVKGVFLIGNPD 118 (205)
T ss_dssp HHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHHCSSSHHHHHEEEEEEESCTT
T ss_pred HHHHHHHHHHHHhhCCCCcEEEEeeCchhHHHHHHHHhccCChhhhhhEEEEEEEeCCC
Confidence 344444555555555667999999999999988877654 3 4799999998543
|
| >3aja_A Putative uncharacterized protein; alpha-beta hydrolase, serine esterase, cutinase, lipase, HYD; 2.90A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=95.40 E-value=0.043 Score=42.76 Aligned_cols=80 Identities=11% Similarity=0.038 Sum_probs=49.1
Q ss_pred CCcEEEEecCCCCCCCCCC-CCCCc--cch----HHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHh--------C
Q 020064 70 DFYRIILFDQRGAGKSTPH-ACLDQ--NTT----WDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLA--------H 134 (331)
Q Consensus 70 ~g~~vi~~D~~G~G~s~~~-~~~~~--~~~----~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~--------~ 134 (331)
....++.++|+-.-..... ..... .+. .++.+.+....+.....+++|+|+|.|+.++-.++.. .
T Consensus 83 ~~v~v~~V~YPA~~~~~~~~~~~~~Y~~S~~~G~~~~~~~i~~~~~~CP~TkiVL~GYSQGA~V~~~~~~~i~~g~~~~~ 162 (302)
T 3aja_A 83 DRLQVYTTPYTAQFHNPFAADKQMSYNDSRAEGMRTTVKAMTDMNDRCPLTSYVIAGFSQGAVIAGDIASDIGNGRGPVD 162 (302)
T ss_dssp TTEEEEECCCCCCCCCTTTTCCCCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHHHTTCSSSC
T ss_pred CcceEEeccccccccccccccccccccccHHHHHHHHHHHHHHHHhhCCCCcEEEEeeCchHHHHHHHHHhccCCCCCCC
Confidence 5667888888864321100 00011 122 2334444444455556799999999999999887743 2
Q ss_pred CCceeeEEEeccccc
Q 020064 135 PDKVTGLVLRGIFLL 149 (331)
Q Consensus 135 p~~v~~li~~~~~~~ 149 (331)
+++|.++++++-+..
T Consensus 163 ~~~V~aVvLfGdP~r 177 (302)
T 3aja_A 163 EDLVLGVTLIADGRR 177 (302)
T ss_dssp GGGEEEEEEESCTTC
T ss_pred hHHEEEEEEEeCCCC
Confidence 468999999986543
|
| >2ory_A Lipase; alpha/beta hydrolase, hydrolase; 2.20A {Photobacterium SP} | Back alignment and structure |
|---|
Probab=94.41 E-value=0.037 Score=44.25 Aligned_cols=22 Identities=27% Similarity=0.199 Sum_probs=19.3
Q ss_pred CCcEEEEEeChhHHHHHHHHHh
Q 020064 112 IPEWQVFGGSWGSTLALAYSLA 133 (331)
Q Consensus 112 ~~~v~lvG~S~Gg~~a~~~a~~ 133 (331)
..++++.|||+||.+|..+|..
T Consensus 165 ~~~i~vtGHSLGGAlA~l~a~~ 186 (346)
T 2ory_A 165 KAKICVTGHSKGGALSSTLALW 186 (346)
T ss_dssp CEEEEEEEETHHHHHHHHHHHH
T ss_pred CceEEEecCChHHHHHHHHHHH
Confidence 3589999999999999988875
|
| >2yij_A Phospholipase A1-iigamma; hydrolase; 2.00A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=92.90 E-value=0.011 Score=48.18 Aligned_cols=37 Identities=16% Similarity=0.250 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHhCC--CcEEEEEeChhHHHHHHHHHhC
Q 020064 98 DLIDDIEKLRQHLEI--PEWQVFGGSWGSTLALAYSLAH 134 (331)
Q Consensus 98 ~~~~~~~~~~~~~~~--~~v~lvG~S~Gg~~a~~~a~~~ 134 (331)
.+.+.+..+++.... .++++.|||+||.+|..+|...
T Consensus 211 ~Vl~~l~~ll~~yp~~~~~I~vTGHSLGGALA~L~A~~L 249 (419)
T 2yij_A 211 QVLREVGRLLEKYKDEEVSITICGHSLGAALATLSATDI 249 (419)
Confidence 344455555555543 4799999999999999888654
|
| >3pa8_A Toxin B; CLAN CD cysteine protease, protease, toxin-peptide in complex; HET: 621 IHP; 2.00A {Clostridium difficile} PDB: 3pee_B* | Back alignment and structure |
|---|
Probab=88.58 E-value=0.49 Score=34.84 Aligned_cols=52 Identities=19% Similarity=0.090 Sum_probs=38.2
Q ss_pred EEEEecCCCCCCCCCCC-CCCccchHHHHHHHHHHHHHhCC----C--cEEEEEeChhH
Q 020064 73 RIILFDQRGAGKSTPHA-CLDQNTTWDLIDDIEKLRQHLEI----P--EWQVFGGSWGS 124 (331)
Q Consensus 73 ~vi~~D~~G~G~s~~~~-~~~~~~~~~~~~~~~~~~~~~~~----~--~v~lvG~S~Gg 124 (331)
.-+.+-+-|||++.... ....++.++++..+..+.+.++. + ++.|+|+||-+
T Consensus 101 gkiRwqlVGHGr~e~n~~~fag~sadeLa~~L~~f~~~~~~~~~pK~i~IsLvGCsL~s 159 (254)
T 3pa8_A 101 PKIKLTFIGHGKDEFNTDIFAGFDVDSLSTEIEAAIDLAKEDISPKSIEINLLGCNMFS 159 (254)
T ss_dssp SEEEEEEECCCCSSCCSSEETTEEHHHHHHHHHHHHHHHTTTCCCSEEEEEEESSSCCC
T ss_pred CceEEEEEecCcCCCCcceeccCCHHHHHHHHHHHHHHHhhccCCCCceEEEEeecccC
Confidence 35667777999986433 33568999999999999988863 2 37788888753
|
| >3ho6_A Toxin A; inositol phosphate, enterotoxin; HET: IHP; 1.60A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=85.79 E-value=1.2 Score=33.44 Aligned_cols=51 Identities=14% Similarity=0.164 Sum_probs=37.3
Q ss_pred EEEecCCCCCCCCCC-CCCCccchHHHHHHHHHHHHHhCC----CcE--EEEEeChhH
Q 020064 74 IILFDQRGAGKSTPH-ACLDQNTTWDLIDDIEKLRQHLEI----PEW--QVFGGSWGS 124 (331)
Q Consensus 74 vi~~D~~G~G~s~~~-~~~~~~~~~~~~~~~~~~~~~~~~----~~v--~lvG~S~Gg 124 (331)
=+.+-+-|||+.... .....++.++++.-+..+.+.++. +++ .|+|+||+.
T Consensus 105 klRWqlVGHGr~e~n~~tlaG~sa~~LA~~L~~f~~~~~~~~~P~~I~~sLvGCsL~s 162 (267)
T 3ho6_A 105 KVKVTFIGHGKDEFNTSEFARLSVDSLSNEISSFLDTIKLDISPKNVEVNLLGCNMFS 162 (267)
T ss_dssp EEEEEEECCCCSSCCSSCBTTBCHHHHHHHHHHHHHHHTTTCCCSEEEEEEESSSCCC
T ss_pred ceEEEEEeCCCCCCCccccCCCCHHHHHHHHHHHHHHhhccCCCCcceeeeEeeecCC
Confidence 456666799988533 234678999999999999888763 346 788888764
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 331 | ||||
| d1azwa_ | 313 | c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas | 5e-70 | |
| d1wm1a_ | 313 | c.69.1.7 (A:) Proline aminopeptidase {Serratia mar | 2e-49 | |
| d1q0ra_ | 297 | c.69.1.28 (A:) Aclacinomycin methylesterase RdmC { | 5e-17 | |
| d1zd3a2 | 322 | c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, | 7e-17 | |
| d1mtza_ | 290 | c.69.1.7 (A:) Tricorn interacting factor F1 {Archa | 1e-16 | |
| d1bn7a_ | 291 | c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus | 3e-16 | |
| d1uk8a_ | 271 | c.69.1.10 (A:) Meta-cleavage product hydrolase Cum | 6e-14 | |
| d1cvla_ | 319 | c.69.1.18 (A:) Lipase {Chromobacterium viscosum [T | 1e-12 | |
| d1ex9a_ | 285 | c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [Tax | 1e-11 | |
| d2rhwa1 | 283 | c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2 | 2e-11 | |
| d1mj5a_ | 298 | c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomona | 3e-11 | |
| d1j1ia_ | 268 | c.69.1.10 (A:) Meta cleavage compound hydrolase Ca | 5e-11 | |
| d1a8qa_ | 274 | c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces au | 7e-11 | |
| d1brta_ | 277 | c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces au | 1e-10 | |
| d1k8qa_ | 377 | c.69.1.6 (A:) Gastric lipase {Dog (Canis familiari | 2e-10 | |
| d1xkla_ | 258 | c.69.1.20 (A:) Salicylic acid-binding protein 2 (S | 2e-10 | |
| d1a88a_ | 275 | c.69.1.12 (A:) Chloroperoxidase L {Streptomyces li | 2e-10 | |
| d1m33a_ | 256 | c.69.1.26 (A:) Biotin biosynthesis protein BioH {E | 5e-10 | |
| d1ehya_ | 293 | c.69.1.11 (A:) Bacterial epoxide hydrolase {Agroba | 6e-10 | |
| d1b6ga_ | 310 | c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacte | 3e-09 | |
| d1c4xa_ | 281 | c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-di | 3e-09 | |
| d3c70a1 | 256 | c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber t | 5e-09 | |
| d1va4a_ | 271 | c.69.1.12 (A:) Arylesterase {Pseudomonas fluoresce | 1e-08 | |
| d1a8sa_ | 273 | c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas flu | 1e-08 | |
| d1qlwa_ | 318 | c.69.1.15 (A:) A novel bacterial esterase {Alcalig | 1e-07 | |
| d1tcaa_ | 317 | c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Cand | 2e-07 | |
| d1hkha_ | 279 | c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. | 3e-07 | |
| d1ispa_ | 179 | c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: | 7e-07 | |
| d1imja_ | 208 | c.69.1.23 (A:) Ccg1/TafII250-interacting factor B | 1e-06 | |
| d1pjaa_ | 268 | c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {H | 3e-06 | |
| d1xkta_ | 286 | c.69.1.22 (A:) Fatty acid synthase {Human (Homo sa | 8e-06 | |
| d1thta_ | 302 | c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase | 5e-05 | |
| d1r3da_ | 264 | c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio | 2e-04 | |
| d2h7xa1 | 283 | c.69.1.22 (A:9-291) Picromycin polyketide synthase | 0.001 | |
| d1mo2a_ | 255 | c.69.1.22 (A:) Erythromycin polyketide synthase {S | 0.002 | |
| d3b5ea1 | 209 | c.69.1.14 (A:7-215) Uncharacterized protein Mll837 | 0.003 |
| >d1azwa_ c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas campestris, pv. citri [TaxId: 339]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline iminopeptidase species: Xanthomonas campestris, pv. citri [TaxId: 339]
Score = 218 bits (556), Expect = 5e-70
Identities = 176/305 (57%), Positives = 217/305 (71%)
Query: 14 NLYPYVEPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYR 73
LYP + PY G LKV D HT+Y+EQ GNP G PVV LHGGPGGG RRF DP YR
Sbjct: 3 TLYPEITPYQQGSLKVDDRHTLYFEQCGNPHGKPVVMLHGGPGGGCNDKMRRFHDPAKYR 62
Query: 74 IILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLA 133
I+LFDQRG+G+STPHA L NTTWDL+ DIE+LR HL + WQVFGGSWGSTLALAY+
Sbjct: 63 IVLFDQRGSGRSTPHADLVDNTTWDLVADIERLRTHLGVDRWQVFGGSWGSTLALAYAQT 122
Query: 134 HPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRL 193
HP +VT LVLRGIFLLR+ E++WFY+ GA+ ++PDAWE + + IP ER+ + A+ +RL
Sbjct: 123 HPQQVTELVLRGIFLLRRFELEWFYQEGASRLFPDAWEHYLNAIPPVERADLMSAFHRRL 182
Query: 194 NSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPS 253
SDD+ T+ AAA+AW+ WE T+ L +E+ + ED F+LAFARIENHYF+N GFF
Sbjct: 183 TSDDEATRLAAAKAWSVWEGATSFLHVDEDFVTGHEDAHFALAFARIENHYFVNGGFFEV 242
Query: 254 DSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIA 313
+ LL + I I IV GRYDV CP+ SAWDLHKAWP+A ++ +GHSA EP
Sbjct: 243 EDQLLRDAHRIADIPGVIVHGRYDVVCPLQSAWDLHKAWPKAQLQISPASGHSAFEPENV 302
Query: 314 AELVA 318
LV
Sbjct: 303 DALVR 307
|
| >d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens [TaxId: 615]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline aminopeptidase species: Serratia marcescens [TaxId: 615]
Score = 165 bits (417), Expect = 2e-49
Identities = 164/310 (52%), Positives = 216/310 (69%), Gaps = 1/310 (0%)
Query: 14 NLYPYVEPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYR 73
LYP + Y +G L D H IYWE SGNP G P VF+HGGPGGG +P +R+ FDP+ Y+
Sbjct: 3 GLYPPLAAYDSGWLDTGDGHRIYWELSGNPNGKPAVFIHGGPGGGISPHHRQLFDPERYK 62
Query: 74 IILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLA 133
++LFDQRG G+S PHA LD NTTW L+ DIE+LR+ + +W VFGGSWGSTLALAY+
Sbjct: 63 VLLFDQRGCGRSRPHASLDNNTTWHLVADIERLREMAGVEQWLVFGGSWGSTLALAYAQT 122
Query: 134 HPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRL 193
HP++V+ +VLRGIF LRK+ + W+Y+ GA+ +P+ WE ++ ++ER + AY +RL
Sbjct: 123 HPERVSEMVLRGIFTLRKQRLHWYYQDGASRFFPEKWERVLSILSDDERKDVIAAYRQRL 182
Query: 194 NSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPS 253
S D + Q AA+ W+ WE T LLP+ E+ GEDD F+LAFARIENHYF + GF S
Sbjct: 183 TSADPQVQLEAAKLWSVWEGETVTLLPSRESASFGEDD-FALAFARIENHYFTHLGFLES 241
Query: 254 DSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIA 313
D LL N+ IRHI A IV GRYD+ C + +AWDL KAWPEA+ +V AGHS +EPGI
Sbjct: 242 DDQLLRNVPLIRHIPAVIVHGRYDMACQVQNAWDLAKAWPEAELHIVEGAGHSYDEPGIL 301
Query: 314 AELVATNEKL 323
+L+ ++
Sbjct: 302 HQLMIATDRF 311
|
| >d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC {Streptomyces purpurascens [TaxId: 1924]} Length = 297 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Aclacinomycin methylesterase RdmC domain: Aclacinomycin methylesterase RdmC species: Streptomyces purpurascens [TaxId: 1924]
Score = 78.0 bits (190), Expect = 5e-17
Identities = 37/290 (12%), Positives = 83/290 (28%), Gaps = 14/290 (4%)
Query: 23 STGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTT--PSNRRFFDPDFYRIILFDQR 80
S I+ D+ ++ + G+P ++ + GG R +I +D R
Sbjct: 1 SERIVPSGDV-ELWSDDFGDPADPALLLVMGGNLSALGWPDEFARRLADGGLHVIRYDHR 59
Query: 81 GAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVF-GGSWGSTLALAYSLAHPDKVT 139
G+ST + + + G S G+T+ +L H D+++
Sbjct: 60 DTGRSTTRDFAAHPYGFGELAADAVAVLDGWGVDRAHVVGLSMGATITQVIALDHHDRLS 119
Query: 140 GLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKE 199
L + L D + + +N +
Sbjct: 120 SLTMLLGGGLDIDFDANIERVMRGEPTLDGLPGPQQPFLD---------ALALMNQPAEG 170
Query: 200 TQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLD 259
A+ +KW +++ +P ++ ++ + + +
Sbjct: 171 RAAEVAKRVSKWRILSGTGVPFDDAEYARWEERAIDHAGGVLAEPYAHYSLTLPPPSRAA 230
Query: 260 NIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANE 309
+ + ++Q +D P L P A + GH+
Sbjct: 231 ELREVTV-PTLVIQAEHDPIAPAPHGKHLAGLIPTARLAEIPGMGHALPS 279
|
| >d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Mammalian epoxide hydrolase, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 78.0 bits (190), Expect = 7e-17
Identities = 47/296 (15%), Positives = 91/296 (30%), Gaps = 8/296 (2%)
Query: 20 EPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTT-PSNRRFFDPDFYRIILFD 78
S G + V +++ + G+ G V HG P + YR++ D
Sbjct: 9 SDMSHGYVTVKPRVRLHFVELGS--GPAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMD 66
Query: 79 QRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKV 138
+G G+S+ +++ L ++ L + + G WG L +L +P++V
Sbjct: 67 MKGYGESSAPPEIEEYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERV 126
Query: 139 TGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRD-LIPENERSCFVDAYSKRLNSDD 197
+ + E A D F++ + E E + K L
Sbjct: 127 RAVASLNTPFIPANPNMSPLESIKANPVFDYQLYFQEPGVAEAELEQNLSRTFKSLFRAS 186
Query: 198 KETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDI--FSLAFARIENHYFLNKGFFPSDS 255
E+ + + + + E++I + F + LN +
Sbjct: 187 DESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKSGFRGPLNWYRNMERN 246
Query: 256 FLLDNIDNIRHIN--ATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANE 309
+ R I A +V D + + P + D GH
Sbjct: 247 WKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWIPHLKRGHIEDCGHWTQM 302
|
| >d1mtza_ c.69.1.7 (A:) Tricorn interacting factor F1 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 290 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Tricorn interacting factor F1 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 76.9 bits (187), Expect = 1e-16
Identities = 46/279 (16%), Positives = 93/279 (33%), Gaps = 20/279 (7%)
Query: 33 HTIYWEQSGNPTGHP-VVFLHGGPGGGTTP-SNRRFFDPDFYRIILFDQRGAGKSTPHAC 90
IY++ P ++ +HGGPG + R + ++ +DQ G G+S
Sbjct: 12 IYIYYKLCKAPEEKAKLMTMHGGPGMSHDYLLSLRDMTKEGITVLFYDQFGCGRSEEPDQ 71
Query: 91 LDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLR 150
+ + + + + + G S+G LALAY++ + D + GL++ G
Sbjct: 72 SKFTIDYGVEEAEALRSKLFGNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSV 131
Query: 151 KKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTK 210
+ + + +RD I + + ++ E Q A + +
Sbjct: 132 PLTVKEMNR-----LIDELPAKYRDAIKKYGS---------SGSYENPEYQEAVNYFYHQ 177
Query: 211 WEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINAT 270
+ + P + N + + D + + + I
Sbjct: 178 HLLRSEDWPPEVLKSLEYAERRNVYRIMNGPNEFTITGTIKDWD---ITDKISAIKIPTL 234
Query: 271 IVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANE 309
I G YD P + A +H+ ++ V D H
Sbjct: 235 ITVGEYDEVTPNV-ARVIHEKIAGSELHVFRDCSHLTMW 272
|
| >d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1831]} Length = 291 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Rhodococcus sp. [TaxId: 1831]
Score = 75.7 bits (184), Expect = 3e-16
Identities = 43/289 (14%), Positives = 78/289 (26%), Gaps = 21/289 (7%)
Query: 21 PYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQR 80
P+ ++V +++ G G PV+FLHG P N +R I D
Sbjct: 6 PFDPHYVEVLG-ERMHYVDVGPRDGTPVLFLHGNPTSSYLWRNIIPHVAPSHRCIAPDLI 64
Query: 81 GAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTG 140
G GKS + ++ + L + E + WGS L ++ +P++V G
Sbjct: 65 GMGKSDKPDLDYFFDDH--VRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKG 122
Query: 141 LVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKET 200
+ +W + R+LI +
Sbjct: 123 IACMEFIRPIPTWDEWPEFARETFQAFRTADVGRELIIDQNAFI---------------- 166
Query: 201 QYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDN 260
+ + E + D F ++
Sbjct: 167 -EGVLPKCVVRPLTEVEMDHYREPFLKPVDREPLWRFPNEIPIAGEPANIVALVEAYMNW 225
Query: 261 IDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANE 309
+ + + G V P A L ++ P + H E
Sbjct: 226 LHQSP-VPKLLFWGTPGVLIPPAEAARLAESLPNCKTVDIGPGLHYLQE 273
|
| >d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD {Pseudomonas fluorescens [TaxId: 294]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta-cleavage product hydrolase CumD species: Pseudomonas fluorescens [TaxId: 294]
Score = 68.7 bits (166), Expect = 6e-14
Identities = 51/280 (18%), Positives = 88/280 (31%), Gaps = 41/280 (14%)
Query: 33 HTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDF---YRIILFDQRGAGKSTPHA 89
+ G G PV+ +HG G + +N R P YR+I D G G +
Sbjct: 13 VLTNYHDVGE--GQPVILIHGSGPGVSAYANWRLTIPALSKFYRVIAPDMVGFGFTDRPE 70
Query: 90 CLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLL 149
+ + +D I + LEI + + G ++G LA+A +L + ++V +VL G
Sbjct: 71 NYNYSKDSW-VDHIIGIMDALEIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGT 129
Query: 150 RKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWT 209
R + + + D+ AY + L +D+ A
Sbjct: 130 RFDVTEGLNAVWGYTPSIENMRNLLDIF----------AYDRSLVTDELARLRYEASIQP 179
Query: 210 KWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINA 269
++ + + P + N
Sbjct: 180 GFQESFSSMFPEPRQRWIDALASSDEDIKTLPNETL------------------------ 215
Query: 270 TIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANE 309
I+ GR D P+ S+ L + A V GH
Sbjct: 216 -IIHGREDQVVPLSSSLRLGELIDRAQLHVFGRCGHWTQI 254
|
| >d1cvla_ c.69.1.18 (A:) Lipase {Chromobacterium viscosum [TaxId: 42739]} Length = 319 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Chromobacterium viscosum [TaxId: 42739]
Score = 65.2 bits (158), Expect = 1e-12
Identities = 13/108 (12%), Positives = 33/108 (30%), Gaps = 11/108 (10%)
Query: 43 PTGHPVVFLHGGPGGGTTPSNRRFFDP-------DFYRIILFDQRGAGKSTPHACLDQNT 95
T +PV+ +HG G + ++ ++ + + G
Sbjct: 6 ATRYPVILVHGLAGTDKFANVVDYWYGIQSDLQSHGAKVYVANLSGFQSDDGPN----GR 61
Query: 96 TWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVL 143
L+ ++++ + + G S G + + P V +
Sbjct: 62 GEQLLAYVKQVLAATGATKVNLIGHSQGGLTSRYVAAVAPQLVASVTT 109
|
| >d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 62.1 bits (150), Expect = 1e-11
Identities = 19/177 (10%), Positives = 41/177 (23%), Gaps = 20/177 (11%)
Query: 43 PTGHPVVFLHGGPGGGTTPS------NRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTT 96
T +P+V HG G D ++ + + S
Sbjct: 5 QTKYPIVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQLDTSEVRG------- 57
Query: 97 WDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDW 156
L+ +E++ P+ + G S G + PD + G D+
Sbjct: 58 EQLLQQVEEIVALSGQPKVNLIGHSHGGPTIRYVAAVRPDLIASATSVGAPHKGSDTADF 117
Query: 157 FYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEM 213
+ + + + S + + +
Sbjct: 118 LRQIPPGSAGEAVLSGLVNSLGALISFLS-------SGSTGTQNSLGSLESLNSEGA 167
|
| >d2rhwa1 c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Burkholderia xenovorans [TaxId: 36873]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Burkholderia xenovorans [TaxId: 36873]
Score = 61.0 bits (146), Expect = 2e-11
Identities = 57/283 (20%), Positives = 88/283 (31%), Gaps = 42/283 (14%)
Query: 33 HTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDF----YRIILFDQRGAGKSTPH 88
I++ ++GN G V+ LHGG G SN F YR+IL D G KS
Sbjct: 20 FNIHYNEAGN--GETVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVILKDSPGFNKSDAV 77
Query: 89 ACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFL 148
D+ ++ L L+I + G + G AL ++L +PD++ L+L G
Sbjct: 78 VM-DEQRGLVNARAVKGLMDALDIDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGG 136
Query: 149 LRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAW 208
L G ++ YA
Sbjct: 137 LGPSMFAPMPMEGIKLLFK---------------------------------LYAEPSYE 163
Query: 209 TKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHIN 268
T +M+ L + + + E+ + D + I
Sbjct: 164 TLKQMLQVFLYDQSLITEELLQGRWEAIQRQPEHLKNFLISAQKAPLSTWDVTARLGEIK 223
Query: 269 A--TIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANE 309
A I GR D P+ L +A V + GH A
Sbjct: 224 AKTFITWGRDDRFVPLDHGLKLLWNIDDARLHVFSKCGHWAQW 266
|
| >d1mj5a_ c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]
Score = 61.0 bits (146), Expect = 3e-11
Identities = 33/293 (11%), Positives = 62/293 (21%), Gaps = 25/293 (8%)
Query: 20 EPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQ 79
+P+ + + G G P++F HG P N R+I D
Sbjct: 5 KPFGEKKFIEIKGRRMAYIDEGT--GDPILFQHGNPTSSYLWRNIMPHCAGLGRLIACDL 62
Query: 80 RGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVF---GGSWGSTLALAYSLAHPD 136
G G S + WGS L ++ H +
Sbjct: 63 IGMGDSDKLDPSGPERYAYAEHRDYLDALWEALDLGDRVVLVVHDWGSALGFDWARRHRE 122
Query: 137 KVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSD 196
+V G+ + + D+ + + + L
Sbjct: 123 RVQGIAYMEAIAMPIEWADFPEQDRDLFQAFRSQ------------------AGEELVLQ 164
Query: 197 DKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSF 256
D + A + E + + + +
Sbjct: 165 DNVFVEQVLPGLILRPLSEAEMAAYREPFLAAGEARRPTLSWPRQIPIAGTPADVVAIAR 224
Query: 257 LLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANE 309
+ I + D + WP + H E
Sbjct: 225 DYAGWLSESPIPKLFINAEPGALTTGRMR-DFCRTWPNQTE-ITVAGAHFIQE 275
|
| >d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC {Janthinobacterium sp. J3 [TaxId: 213804]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta cleavage compound hydrolase CarC species: Janthinobacterium sp. J3 [TaxId: 213804]
Score = 59.8 bits (143), Expect = 5e-11
Identities = 46/280 (16%), Positives = 83/280 (29%), Gaps = 43/280 (15%)
Query: 33 HTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDF---YRIILFDQRGAGKSTPHA 89
+ ++G G PV+ +HGG G + N R P YR+I D G T
Sbjct: 12 VETRYLEAGK--GQPVILIHGGGAGAESEGNWRNVIPILARHYRVIAMDMLG-FGKTAKP 68
Query: 90 CLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLL 149
++ + + ++ + + G S G L S+ H + V LVL G L
Sbjct: 69 DIEYTQDRRIRHLHDFIKAMNFDGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGL 128
Query: 150 RKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWT 209
+ + + + + + R E A A
Sbjct: 129 VVEIHEDLRPIINYDFTREGMVHLVKALTNDGFKIDDAMINSRYTYATDEATRKAYVATM 188
Query: 210 KWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINA 269
+W L + E I++ +
Sbjct: 189 QWIREQGGLFYDPEFIRK-------------------------------------VQVPT 211
Query: 270 TIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANE 309
+VQG+ D P+ +A+ ++ ++ GH A
Sbjct: 212 LVVQGKDDKVVPVETAYKFLDLIDDSWGYIIPHCGHWAMI 251
|
| >d1a8qa_ c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces aureofaciens [TaxId: 1894]} Length = 274 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A1 species: Streptomyces aureofaciens [TaxId: 1894]
Score = 59.5 bits (142), Expect = 7e-11
Identities = 52/295 (17%), Positives = 85/295 (28%), Gaps = 33/295 (11%)
Query: 26 ILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTT-PSNRRFFDPDFYRIILFDQRGAGK 84
I D I+++ G G PVVF+HG P G + YR I D+RG G
Sbjct: 2 ICTTRDGVEIFYKDWGQ--GRPVVFIHGWPLNGDAWQDQLKAVVDAGYRGIAHDRRGHGH 59
Query: 85 STPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLR 144
STP + D + L V G LA ++ VL
Sbjct: 60 STPVWD-GYDFDTFADDLNDLLTDLDLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLL 118
Query: 145 GIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAA 204
+ D +G + + +++ ++ + + D +++ +
Sbjct: 119 SAIPPVMIKSDKNPDG----VPDEVFDALKNGVLTERSQFWKDTAEGFFSANRPGNKVTQ 174
Query: 205 ARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNI 264
W M A + AF + L K
Sbjct: 175 GNKDAFWYMAMAQTIEGGVRCVD--------AFGYTDFTEDLKK---------------- 210
Query: 265 RHINATIVQGRYDVCCPM-MSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVA 318
I +V G D P+ + + P A+ KV + H E
Sbjct: 211 FDIPTLVVHGDDDQVVPIDATGRKSAQIIPNAELKVYEGSSHGIAMVPGDKEKFN 265
|
| >d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A2 species: Streptomyces aureofaciens [TaxId: 1894]
Score = 59.1 bits (141), Expect = 1e-10
Identities = 48/290 (16%), Positives = 78/290 (26%), Gaps = 30/290 (10%)
Query: 21 PYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTT-PSNRRFFDPDFYRIILFDQ 79
P+ T + S +Y+E G TG PVV +HG P G + YR+I +D+
Sbjct: 1 PFITVGQENSTSIDLYYEDHG--TGQPVVLIHGFPLSGHSWERQSAALLDAGYRVITYDR 58
Query: 80 RGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVT 139
RG G+S+ T+ D L V + +A S ++
Sbjct: 59 RGFGQSSQPTTGYDYDTFA-ADLNTVLETLDLQDAVLVGFSTGTGEVARYVSSYGTARIA 117
Query: 140 GLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKE 199
+ + D +G A + D + + F + + +
Sbjct: 118 KVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTR 177
Query: 200 TQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLD 259
A R D
Sbjct: 178 ISEEAVRNSWNTAASGGFFAAAAAPTTWYTD--------------------------FRA 211
Query: 260 NIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANE 309
+I I + +A HKA P A++ V A H
Sbjct: 212 DIPRIDVPALILHGTGDRTLPIENTARVFHKALPSAEYVEVEGAPHGLLW 261
|
| >d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]} Length = 377 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Gastric lipase domain: Gastric lipase species: Dog (Canis familiaris) [TaxId: 9615]
Score = 59.3 bits (142), Expect = 2e-10
Identities = 36/316 (11%), Positives = 70/316 (22%), Gaps = 37/316 (11%)
Query: 26 ILKVSDIHTIYWEQSGNPTGHPVVFLHGGPG-------GGTTPSNRRFFDPDFYRIILFD 78
IL + I HG S Y + L +
Sbjct: 39 ILGIDRIPYGRKNSENIGRRPVAFLQHGLLASATNWISNLPNNSLAFILADAGYDVWLGN 98
Query: 79 QRGAGKSTPHACL------------DQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTL 126
RG + + D+ +DL I+ + + + G S G+T+
Sbjct: 99 SRGNTWARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKTGQDKLHYVGHSQGTTI 158
Query: 127 ALAYSLAHPDKVTGLVLRGI---------------FLLRKKEIDWFYEGGAAAIYPDAWE 171
+P + L+ + G YP +
Sbjct: 159 GFIAFSTNPKLAKRIKTFYALAPVATVKYTETLINKLMLVPSFLFKLIFGNKIFYPHHFF 218
Query: 172 SFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDD 231
R S L + + + +N+
Sbjct: 219 DQFLATEVCSRETVDLLCSNALFIICGFDTMNLNMSRLDVYLSHNPAGTSVQNVLHWSQA 278
Query: 232 IFSLAFARIE-NHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHK 290
+ S F + N + N+ ++ + + G D+ L
Sbjct: 279 VKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMH-VPIAVWNGGNDLLADPHDVDLLLS 337
Query: 291 AWPEAD-FKVVADAGH 305
P + + H
Sbjct: 338 KLPNLIYHRKIPPYNH 353
|
| >d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2) {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Salicylic acid-binding protein 2 (SABP2) species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Score = 58.4 bits (139), Expect = 2e-10
Identities = 29/266 (10%), Positives = 57/266 (21%), Gaps = 28/266 (10%)
Query: 45 GHPVVFLHGGPGGGTT-PSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDI 103
G V +HG GG + + + +++ D +G + + +
Sbjct: 2 GKHFVLVHGACHGGWSWYKLKPLLEAAGHKVTALDLAASGTDLRKIEELRTLYDYTLPLM 61
Query: 104 EKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAA 163
E + + + G S G +P K+ V F+ F
Sbjct: 62 ELMESLSADEKVILVGHSLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLEQYN 121
Query: 164 AIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEE 223
P +P Y + L ++
Sbjct: 122 ERTPAENWLDTQFLP-----------------------YGSPEEPLTSMFFGPKFLAHKL 158
Query: 224 NIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMM 283
+D+ + + F+ R D P
Sbjct: 159 YQLCSPEDLALASSLVRPSSLFMEDLSKAKYFTDERFGSVKRVYIVC----TEDKGIPEE 214
Query: 284 SAWDLHKAWPEADFKVVADAGHSANE 309
+ + A H A
Sbjct: 215 FQRWQIDNIGVTEAIEIKGADHMAML 240
|
| >d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans [TaxId: 1916]} Length = 275 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase L species: Streptomyces lividans [TaxId: 1916]
Score = 58.4 bits (139), Expect = 2e-10
Identities = 47/287 (16%), Positives = 75/287 (26%), Gaps = 30/287 (10%)
Query: 25 GILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTT-PSNRRFFDPDFYRIILFDQRGAG 83
G + SD I+++ G G PVVF HG P + FF YR+I D+RG G
Sbjct: 1 GTVTTSDGTNIFYKDWGPRDGLPVVFHHGWPLSADDWDNQMLFFLSHGYRVIAHDRRGHG 60
Query: 84 KSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVL 143
+S + T+ L + G +A + A P +V VL
Sbjct: 61 RSDQPSTGHDMDTYAADVAALTEALDLRGAVHIGH-STGGGEVARYVARAEPGRVAKAVL 119
Query: 144 RGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYA 203
+ D +G ++ + + + + +Q
Sbjct: 120 VSAVPPVMVKSDTNPDGLPLEVFDEFRAALAANRAQFYIDVPSGPFYGFNREGATVSQGL 179
Query: 204 AARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDN 263
W + M A+ D L +
Sbjct: 180 IDHWWLQGMMGAANAHYECIAAFSETDFTDDLKRIDVPVLV------------------- 220
Query: 264 IRHINATIVQGRYDVCCPM-MSAWDLHKAWPEADFKVVADAGHSANE 309
G D P +A + A K H
Sbjct: 221 --------AHGTDDQVVPYADAAPKSAELLANATLKSYEGLPHGMLS 259
|
| >d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH {Escherichia coli [TaxId: 562]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Biotin biosynthesis protein BioH domain: Biotin biosynthesis protein BioH species: Escherichia coli [TaxId: 562]
Score = 56.8 bits (135), Expect = 5e-10
Identities = 42/275 (15%), Positives = 76/275 (27%), Gaps = 39/275 (14%)
Query: 35 IYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQN 94
I+W+ G +V LHG + + L D G G+S L
Sbjct: 2 IWWQTKGQG-NVHLVLLHGWGLNAEVWRCIDEELSSHFTLHLVDLPGFGRSRGFGALSLA 60
Query: 95 TTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEI 154
+ + G S G +A +L HP++V LV
Sbjct: 61 DMAE-------AVLQQAPDKAIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARD 113
Query: 155 DWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMM 214
+W I PD F+ + ++++ + + + Q A A T +
Sbjct: 114 EWP------GIKPDVLAGFQQQLSDDQQRTVERFLALQTMGTETARQDARALKKTVLALP 167
Query: 215 TAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQG 274
+ ++ + + + + G
Sbjct: 168 MPEVDVLNGGLEILKTVDLRQPLQNVSMPFL-------------------------RLYG 202
Query: 275 RYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANE 309
D P L K WP ++ + A A H+
Sbjct: 203 YLDGLVPRKVVPMLDKLWPHSESYIFAKAAHAPFI 237
|
| >d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium radiobacter [TaxId: 358]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Agrobacterium radiobacter [TaxId: 358]
Score = 56.9 bits (135), Expect = 6e-10
Identities = 48/305 (15%), Positives = 93/305 (30%), Gaps = 25/305 (8%)
Query: 20 EPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQ 79
E + +++ D+ I++ + G G ++ LHG PG S + Y +I+ D
Sbjct: 6 EDFKHYEVQLPDV-KIHYVREG--AGPTLLLLHGWPGFWWEWSKVIGPLAEHYDVIVPDL 62
Query: 80 RGAGKSTPH--ACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDK 137
RG G S L + + DD L L I + V G + + + + + D+
Sbjct: 63 RGFGDSEKPDLNDLSKYSLDKAADDQAALLDALGIEKAYVVGHDFAAIVLHKFIRKYSDR 122
Query: 138 VTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDD 197
V + + + ++W S + +
Sbjct: 123 VIKAAIFDPIQPDFGPVYFGL-----GHVHESWYSQFHQLDMAVEVVGSSREVCKKYFKH 177
Query: 198 KETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFL 257
++ E + H D + P +
Sbjct: 178 FFDHWSYRDELLTEEELEVH------------VDNCMKPDNIHGGFNYYRANIRPDAALW 225
Query: 258 LDNIDNIRHINATIVQGRYDVCCPMMSAWD-LHKAWPEADFKVVADAGHSANE--PGIAA 314
D + + T++ G D C P + + K + + + D GH P IA
Sbjct: 226 TDLDHTMSDLPVTMIWGLGDTCVPYAPLIEFVPKYYSNYTMETIEDCGHFLMVEKPEIAI 285
Query: 315 ELVAT 319
+ + T
Sbjct: 286 DRIKT 290
|
| >d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter autotrophicus [TaxId: 280]} Length = 310 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Xanthobacter autotrophicus [TaxId: 280]
Score = 54.9 bits (130), Expect = 3e-09
Identities = 52/325 (16%), Positives = 97/325 (29%), Gaps = 28/325 (8%)
Query: 1 MMESGKELPELNTNL--YPYVEPYSTGILKVSDIHTIYWEQSGNPTGHP-VVFLHGGPGG 57
M+ + + + +NL YP+ P L ++ GN + LHG P
Sbjct: 1 MVNAIRTPDQRFSNLDQYPF-SPNYLDDLPGYPGLRAHYLDEGNSDAEDVFLCLHGEPTW 59
Query: 58 GTT-PSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQ 116
F R+I D G GKS + T + + L + L++
Sbjct: 60 SYLYRKMIPVFAESGARVIAPDFFGFGKSDKPVDEEDYTFEFHRNFLLALIERLDLRNIT 119
Query: 117 VFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDL 176
+ WG L L +A P + L++ L+ + DL
Sbjct: 120 LVVQDWGGFLGLTLPMADPSRFKRLIIMNACLMTDPVTQPAFSAFVTQPADGFTAWKYDL 179
Query: 177 IPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLA 236
+ ++ +D + KR E + +A A A + + + + + ++
Sbjct: 180 VTPSDL--RLDQFMKRWAPTLTEAEASAYAAPFPDTSYQAGVRKFPKMVAQRDQACIDIS 237
Query: 237 FARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEA- 295
I + + G D + +
Sbjct: 238 TEAISFWQND------------------WNGQTFMAIGMKDKLLGPDVMYPMKALINGCP 279
Query: 296 DFKVVADAGHSANE--PGIAAELVA 318
+ +ADAGH E +A E +
Sbjct: 280 EPLEIADAGHFVQEFGEQVAREALK 304
|
| >d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId: 1831]} Length = 281 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Rhodococcus sp., strain rha1 [TaxId: 1831]
Score = 54.5 bits (129), Expect = 3e-09
Identities = 39/283 (13%), Positives = 77/283 (27%), Gaps = 31/283 (10%)
Query: 30 SDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDF---YRIILFDQRGAGKST 86
S + +G+P VV LHG G SN R PD + ++ D G G+S
Sbjct: 11 SGTLASHALVAGDPQSPAVVLLHGAGPGAHAASNWRPIIPDLAENFFVVAPDLIGFGQSE 70
Query: 87 PHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGI 146
+ + +E++ + + + + G V +
Sbjct: 71 YPETYPGHIMSWVGMRVEQILGLMNHFGIEKSHIVG-------------NSMGGAVTLQL 117
Query: 147 FLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAAR 206
+ + D G+ +A + + Y + ++S + +
Sbjct: 118 VVEAPERFDKVALMGSVGAPMNARPPELARLLAFYADPRLTPYRELIHSFVYDPENFPGM 177
Query: 207 AWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRH 266
P I+ + +
Sbjct: 178 EEIVKSRFEVANDPEVRRIQEVMFESMKAGMESLVIPPATLGRL---------------P 222
Query: 267 INATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANE 309
+ + GR D P+ ++ L K A+ V+ GH A
Sbjct: 223 HDVLVFHGRQDRIVPLDTSLYLTKHLKHAELVVLDRCGHWAQL 265
|
| >d3c70a1 c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber tree (Hevea brasiliensis) [TaxId: 3981]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Hydroxynitrile lyase species: Rubber tree (Hevea brasiliensis) [TaxId: 3981]
Score = 54.1 bits (128), Expect = 5e-09
Identities = 20/261 (7%), Positives = 51/261 (19%), Gaps = 30/261 (11%)
Query: 49 VFLHGGPGGGTT-PSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLR 107
V +H G + + +++ D +G + + L
Sbjct: 6 VLIHTICHGAWIWHKLKPLLEALGHKVTALDLAASGVDPRQIEEIGSFDEYSEPLLTFLE 65
Query: 108 QHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYP 167
+ + G S G + + +K+ V ++ P
Sbjct: 66 ALPPGEKVILVGESCGGLNIAIAADKYCEKIAAAVF------------------HNSVLP 107
Query: 168 DAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKR 227
D ++ + + + + + L E +
Sbjct: 108 DTEHCPSYVVDKLMEVFPDWKDTTYFTYTKDGKEITGLKLGFTLLRENLYTLCGPEEYEL 167
Query: 228 GEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWD 287
+ + + + I V D
Sbjct: 168 AKMLTRKGSLFQNILAKRP-----------FFTKEGYGSIKKIYVWTDQDEIFLPEFQLW 216
Query: 288 LHKAWPEADFKVVADAGHSAN 308
+ + V H
Sbjct: 217 QIENYKPDKVYKVEGGDHKLQ 237
|
| >d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens [TaxId: 294]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Arylesterase species: Pseudomonas fluorescens [TaxId: 294]
Score = 53.0 bits (125), Expect = 1e-08
Identities = 49/282 (17%), Positives = 86/282 (30%), Gaps = 34/282 (12%)
Query: 30 SDIHTIYWEQSGNPTGHPVVFLHGGPGGGTT-PSNRRFFDPDFYRIILFDQRGAGKSTPH 88
D IY++ G+ G PV+F HG + YR I FD+RG G+S
Sbjct: 6 KDGTQIYFKDWGS--GKPVLFSHGWLLDADMWEYQMEYLSSRGYRTIAFDRRGFGRSDQP 63
Query: 89 ACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFL 148
+ T+ L+ V G +A + +V GLVL G
Sbjct: 64 WTGNDYDTFADDIAQLIEHLDLKEV-TLVGFSMGGGDVARYIARHGSARVAGLVLLGAVT 122
Query: 149 LRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAW 208
+ + +G + D + F+ + ++ D + + + +
Sbjct: 123 PLFGQKPDYPQG----VPLDVFARFKTELLKDRAQFISDFNAPFYGINKGQVVSQGVQTQ 178
Query: 209 TKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHIN 268
T + A L + + + F A+I +
Sbjct: 179 TLQIALLASLKATVDCVTAFAETDFRPDMAKI-------------------------DVP 213
Query: 269 ATIVQGRYDVCCPM-MSAWDLHKAWPEADFKVVADAGHSANE 309
++ G D P + + A+ KV DA H
Sbjct: 214 TLVIHGDGDQIVPFETTGKVAAELIKGAELKVYKDAPHGFAV 255
|
| >d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas fluorescens [TaxId: 294]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase F species: Pseudomonas fluorescens [TaxId: 294]
Score = 53.0 bits (125), Expect = 1e-08
Identities = 48/283 (16%), Positives = 87/283 (30%), Gaps = 34/283 (12%)
Query: 30 SDIHTIYWEQSGNPTGHPVVFLHGGPGGGTT-PSNRRFFDPDFYRIILFDQRGAGKSTPH 88
D IY++ G+ G P+VF HG P + S F YR+I D+RG G+
Sbjct: 6 RDGTQIYYKDWGS--GQPIVFSHGWPLNADSWESQMIFLAAQGYRVIAHDRRGHGR--SS 61
Query: 89 ACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYS-LAHPDKVTGLVLRGIF 147
N DD+ +L +HL++ + +FG S G Y +V L
Sbjct: 62 QPWSGNDMDTYADDLAQLIEHLDLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAV 121
Query: 148 LLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARA 207
+ + G ++ ++ + + + K +
Sbjct: 122 PPLMLKTEANPGGLPMEVFDGIRQASLADRSQLYKDLASGPFFGFNQPGAKSSAGMVDWF 181
Query: 208 WTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHI 267
W + + AF+ + L K +
Sbjct: 182 WLQGMAAGHKNAYDCIK-----------AFSETDFTEDLKK----------------IDV 214
Query: 268 NATIVQGRYDVCCPMMSAWDLHKAW-PEADFKVVADAGHSANE 309
+V G D P+ ++ A + K+ + A H +
Sbjct: 215 PTLVVHGDADQVVPIEASGIASAALVKGSTLKIYSGAPHGLTD 257
|
| >d1qlwa_ c.69.1.15 (A:) A novel bacterial esterase {Alcaligenes sp. [TaxId: 512]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: A novel bacterial esterase domain: A novel bacterial esterase species: Alcaligenes sp. [TaxId: 512]
Score = 49.8 bits (117), Expect = 1e-07
Identities = 31/240 (12%), Positives = 61/240 (25%), Gaps = 15/240 (6%)
Query: 2 MESGKELPELNTNLYPYVEPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGT-- 59
G+++ +L P + + T D + ++ +P+ +HG G
Sbjct: 18 FVGGRDVTSETLSLSPKYDAHGT---VTVDQMYVRYQIPQRAKRYPITLIHGCCLTGMTW 74
Query: 60 --TPSNRRFFDPDF----YRIILFDQRGAGKSTPHACLDQNTTW--DLIDDIEKLRQHLE 111
TP R +D F Y + DQ G G+S + L
Sbjct: 75 ETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATDISAINAVKLGKAPASSLPDLFAAGH 134
Query: 112 IPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWE 171
W +G A+ L + A + A +
Sbjct: 135 EAAWA--IFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDWLGSMPTPNPTVANLSKLAIK 192
Query: 172 SFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDD 231
++ + +S + +N + L + G+
Sbjct: 193 LDGTVLLSHSQSGIYPFQTAAMNPKGITAIVSVEPGECPKPEDVKPLTSIPVLVVFGDHI 252
|
| >d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida antarctica), form b [TaxId: 34362]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Yeast (Candida antarctica), form b [TaxId: 34362]
Score = 49.3 bits (117), Expect = 2e-07
Identities = 17/113 (15%), Positives = 29/113 (25%), Gaps = 11/113 (9%)
Query: 36 YWEQSGNPTGHPVVFLHGGPGGGTTPSN---RRFFDPDFYRIILFDQRGAGKSTPHACLD 92
S + P++ + G G + Y +
Sbjct: 22 CQGASPSSVSKPILLVPGTGTTGPQSFDSNWIPLSTQLGYTPCWISPPPFMLND-----T 76
Query: 93 QNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHP---DKVTGLV 142
Q T +++ I L + V S G +A P KV L+
Sbjct: 77 QVNTEYMVNAITALYAGSGNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLM 129
|
| >d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId: 51671]} Length = 279 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Gamma-lactamase species: Aureobacterium sp. [TaxId: 51671]
Score = 48.8 bits (114), Expect = 3e-07
Identities = 43/290 (14%), Positives = 85/290 (29%), Gaps = 32/290 (11%)
Query: 25 GILKVSDIHT----IYWEQSGNPTGHPVVFLHGGPGGGTT-PSNRRFFDPDFYRIILFDQ 79
G + V + ++ +Y+E G+ G PVV +HG P G + R YR+I +D+
Sbjct: 1 GYITVGNENSTPIELYYEDQGS--GQPVVLIHGYPLDGHSWERQTRELLAQGYRVITYDR 58
Query: 80 RGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVT 139
RG G S+ T+ L F G
Sbjct: 59 RGFGGSSKVNTGYDYDTFAADLHTVLETLDLRDVVLVGFSMGTGE--------------- 103
Query: 140 GLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKE 199
+ + + A + A + ++ + + K
Sbjct: 104 ----------LARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGVPQEVFDGIEAAAKG 153
Query: 200 TQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLD 259
++A + K L + + + + Y + + ++
Sbjct: 154 DRFAWFTDFYKNFYNLDENLGSRISEQAVTGSWNVAIGSAPVAAYAVVPAWIEDFRSDVE 213
Query: 260 NIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANE 309
+ + + ++ +A H+A PEAD+ V A H
Sbjct: 214 AVRAAGKPTLILHGTKDNILPIDATARRFHQAVPEADYVEVEGAPHGLLW 263
|
| >d1ispa_ c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: 1423]} Length = 179 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase A species: Bacillus subtilis [TaxId: 1423]
Score = 46.4 bits (109), Expect = 7e-07
Identities = 17/102 (16%), Positives = 30/102 (29%), Gaps = 6/102 (5%)
Query: 45 GHPVVFLHGGPGGGTT-PSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDI 103
+PVV +HG G + + + + N L +
Sbjct: 2 HNPVVMVHGIGGASFNFAGIKSYLVSQGWSRDKLYAVD---FWDKTGTNYNNGPVLSRFV 58
Query: 104 EKLRQHLEIPEWQVFGGSWGSTLALAYS--LAHPDKVTGLVL 143
+K+ + + S G L Y L +KV +V
Sbjct: 59 QKVLDETGAKKVDIVAHSMGGANTLYYIKNLDGGNKVANVVT 100
|
| >d1imja_ c.69.1.23 (A:) Ccg1/TafII250-interacting factor B (Cib) {Human (Homo sapiens) [TaxId: 9606]} Length = 208 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Ccg1/TafII250-interacting factor B (Cib) domain: Ccg1/TafII250-interacting factor B (Cib) species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.6 bits (109), Expect = 1e-06
Identities = 22/131 (16%), Positives = 33/131 (25%), Gaps = 3/131 (2%)
Query: 31 DIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDP---DFYRIILFDQRGAGKSTP 87
+ V+ LHG T N YR + D G G S
Sbjct: 17 ALFFREALPGSGQARFSVLLLHGIRFSSETWQNLGTLHRLAQAGYRAVAIDLPGLGHSKE 76
Query: 88 HACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIF 147
A + + LE+ V S +L + A ++ G V
Sbjct: 77 AAAPAPIGELAPGSFLAAVVDALELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPI 136
Query: 148 LLRKKEIDWFY 158
K +
Sbjct: 137 CTDKINAANYA 147
|
| >d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.5 bits (106), Expect = 3e-06
Identities = 18/201 (8%), Positives = 45/201 (22%), Gaps = 15/201 (7%)
Query: 44 TGHPVVFLHGGPGGGTT-PSNRRFFDPDF--YRIILFDQRGAGKSTPHACLDQNTTWDLI 100
+ PV+ +HG + + + + + D +S
Sbjct: 1 SYKPVIVVHGLFDSSYSFRHLLEYINETHPGTVVTVLDLFDGRESLRP---LWEQVQGFR 57
Query: 101 DDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVL------RGIFLLRKKEI 154
+ + + + S G + A D + G +
Sbjct: 58 EAVVPIMAK-APQGVHLICYSQGGLVCRALLSVMDDHNVDSFISLSSPQMGQYGDTDYLK 116
Query: 155 DWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMM 214
F + +Y + + LN+ R +
Sbjct: 117 WLFPTSMRSNLYRICYSPWGQEFSICNYWHDPHHDDLYLNASSFLALINGERDHPNATVW 176
Query: 215 TAHL--LPNEENIKRGEDDIF 233
+ + + I +D +
Sbjct: 177 RKNFLRVGHLVLIGGPDDGVI 197
|
| >d1xkta_ c.69.1.22 (A:) Fatty acid synthase {Human (Homo sapiens) [TaxId: 9606]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Fatty acid synthase species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.4 bits (103), Expect = 8e-06
Identities = 28/268 (10%), Positives = 63/268 (23%), Gaps = 22/268 (8%)
Query: 39 QSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWD 98
S + P+ +H G T A +
Sbjct: 19 NSVQSSERPLFLVHPIEGSTT--VFHSLASRLSIPTYGLQCTRAAPLD--------SIHS 68
Query: 99 LIDDI-EKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWF 157
L + +RQ ++V G S+G+ +A + + L D
Sbjct: 69 LAAYYIDCIRQVQPEGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNSLFL----FDGS 124
Query: 158 YEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAH 217
A + E E + + + A E + A
Sbjct: 125 PTYVLAYTQSYRAKLTPGCEAEAETEAICFFVQQFTDMEHNRVLEALLPLKGLEERVAAA 184
Query: 218 LLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYD 277
+ ++ + + S A + + P + ++ +
Sbjct: 185 VDLIIKSHQGLDRQELSFAARSFYYKLRAAEQYTPKAKYYG-------NVMLLRAKTGGA 237
Query: 278 VCCPMMSAWDLHKAWPEADFKVVADAGH 305
+ + ++L + V + H
Sbjct: 238 YGEDLGADYNLSQVCDGKVSVHVIEGDH 265
|
| >d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Myristoyl-ACP-specific thioesterase species: Vibrio harveyi [TaxId: 669]
Score = 41.8 bits (97), Expect = 5e-05
Identities = 18/190 (9%), Positives = 54/190 (28%), Gaps = 19/190 (10%)
Query: 26 ILKVSD---IHTIYW--EQSGNPTGHPVVFLHGGPG-GGTTPSNRRFFDPDFYRIILFDQ 79
+L+V++ +H +++ + ++ G + + + + +D
Sbjct: 8 VLRVNNGQELHVWETPPKENVPFKNNTILIASGFARRMDHFAGLAEYLSTNGFHVFRYDS 67
Query: 80 RGAGKSTPHACLDQNTTWDLIDDIEKLRQHLE---IPEWQVFGGSWGSTLALAYSLAHPD 136
+ +D+ T + + + L+ + S + +A +
Sbjct: 68 LHHVGLSSG-SIDEFTMTTGKNSLCTVYHWLQTKGTQNIGLIAASLSARVAYE--VISDL 124
Query: 137 KVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSD 196
+++ L+ + E Y D +P + S+ D
Sbjct: 125 ELSFLITAVGV----VNLRDTLEKALGFDYLSL---PIDELPNDLDFEGHKLGSEVFVRD 177
Query: 197 DKETQYAAAR 206
E +
Sbjct: 178 CFEHHWDTLD 187
|
| >d1r3da_ c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio cholerae [TaxId: 666]} Length = 264 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein VC1974 domain: Hypothetical protein VC1974 species: Vibrio cholerae [TaxId: 666]
Score = 39.9 bits (91), Expect = 2e-04
Identities = 30/278 (10%), Positives = 63/278 (22%), Gaps = 38/278 (13%)
Query: 33 HTIYWEQSGNPTGHPVVFLHGGPGGGTT-PSNRRFFDPDFYRIILFDQRGAGKSTPHACL 91
+ +++ + VV +HG G G + D G G + C
Sbjct: 5 NQLHFAKPT-ARTPLVVLVHGLLGSGADWQPVLSHLARTQCAALTLDLPGHGTNPERHCD 63
Query: 92 DQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRK 151
+ ++I+ + E+P V G L +
Sbjct: 64 NFAEAVEMIEQTVQAHVTSEVPVILVGYSLGG-RLIMHGLAQGAFSRLN----------- 111
Query: 152 KEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKW 211
+ G + E + + + D Q + +
Sbjct: 112 --LRGAIIEGGHFGLQENEEKAARWQHDQQWAQRFSQQPIEHVLSDWYQQAVFSSLNHEQ 169
Query: 212 EMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATI 271
+ I + + + + L +
Sbjct: 170 R----------------QTLIAQRSANLGSSVAHMLLATSLAKQPYLLPALQALKLPIHY 213
Query: 272 VQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANE 309
V G D ++ + VA AGH+ +
Sbjct: 214 VCGEQDSKFQQLA------ESSGLSYSQVAQAGHNVHH 245
|
| >d2h7xa1 c.69.1.22 (A:9-291) Picromycin polyketide synthase {Streptomyces venezuelae [TaxId: 54571]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Picromycin polyketide synthase species: Streptomyces venezuelae [TaxId: 54571]
Score = 37.9 bits (87), Expect = 0.001
Identities = 25/189 (13%), Positives = 41/189 (21%), Gaps = 20/189 (10%)
Query: 43 PTGHPVVFLHGGPGGGTTPSNRRFFD--PDFYRIILFDQRGAGKSTPHACLDQNTTWD-- 98
+V G G R + + G G T D
Sbjct: 58 EGRAVLVGCTGTAANGGPHEFLRLSTSFQEERDFLAVPLPGYGTGTGTGTALLPADLDTA 117
Query: 99 LIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSL----AHPDKVTGLVLRGIFL------ 148
L + + + G S G+ LA + AH G+VL +
Sbjct: 118 LDAQARAILRAAGDAPVVLLGHSGGALLAHELAFRLERAHGAPPAGIVLVDPYPPGHQEP 177
Query: 149 --LRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRL----NSDDKETQY 202
+ +++ G DA S + S+
Sbjct: 178 IEVWSRQLGEGLFAGELEPMSDARLLAMGRYARFLAGPRPGRSSAPVLLVRASEPLGDWQ 237
Query: 203 AAARAWTKW 211
W
Sbjct: 238 EERGDWRAH 246
|
| >d1mo2a_ c.69.1.22 (A:) Erythromycin polyketide synthase {Saccharopolyspora erythraea [TaxId: 1836]} Length = 255 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Erythromycin polyketide synthase species: Saccharopolyspora erythraea [TaxId: 1836]
Score = 37.0 bits (85), Expect = 0.002
Identities = 17/110 (15%), Positives = 32/110 (29%), Gaps = 10/110 (9%)
Query: 40 SGNPTGHPVVFLHGGPGGGTTPSNRRFFD--PDFYRIILFDQRGAGKSTPHACLDQNTTW 97
+ P V+ G R + Q G + P ++
Sbjct: 37 ADGPGEVTVICCAGTAAISGPHEFTRLAGALRGIAPVRAVPQPGYEEGEPLP----SSMA 92
Query: 98 DLIDDI-EKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPD---KVTGLVL 143
+ + + + + V G S G+ +A A + D G+VL
Sbjct: 93 AVAAVQADAVIRTQGDKPFVVAGHSAGALMAYALATELLDRGHPPRGVVL 142
|
| >d3b5ea1 c.69.1.14 (A:7-215) Uncharacterized protein Mll8374 {Mesorhizobium loti [TaxId: 381]} Length = 209 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Mll8374 species: Mesorhizobium loti [TaxId: 381]
Score = 36.2 bits (82), Expect = 0.003
Identities = 18/132 (13%), Positives = 31/132 (23%), Gaps = 13/132 (9%)
Query: 40 SGNPTGHPVVFLHGGPGGGTT-PSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWD 98
+G + + LHG TT R P + + T ++
Sbjct: 18 AGKESRECLFLLHGSGVDETTLVPLARRIAPTATLVAARGRIPQEDGFRWFERIDPTRFE 77
Query: 99 ----------LIDDIEKLRQHLEIPEWQVF--GGSWGSTLALAYSLAHPDKVTGLVLRGI 146
+ + + G S G+ L + L HP V L
Sbjct: 78 QKSILAETAAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRP 137
Query: 147 FLLRKKEIDWFY 158
+
Sbjct: 138 MPVLDHVPATDL 149
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 331 | |||
| d1azwa_ | 313 | Proline iminopeptidase {Xanthomonas campestris, pv | 100.0 | |
| d1wm1a_ | 313 | Proline aminopeptidase {Serratia marcescens [TaxId | 100.0 | |
| d1q0ra_ | 297 | Aclacinomycin methylesterase RdmC {Streptomyces pu | 100.0 | |
| d1j1ia_ | 268 | Meta cleavage compound hydrolase CarC {Janthinobac | 100.0 | |
| d1bn7a_ | 291 | Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1 | 100.0 | |
| d1mtza_ | 290 | Tricorn interacting factor F1 {Archaeon Thermoplas | 100.0 | |
| d1uk8a_ | 271 | Meta-cleavage product hydrolase CumD {Pseudomonas | 100.0 | |
| d1zd3a2 | 322 | Mammalian epoxide hydrolase, C-terminal domain {Hu | 100.0 | |
| d1c4xa_ | 281 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 100.0 | |
| d1a88a_ | 275 | Chloroperoxidase L {Streptomyces lividans [TaxId: | 100.0 | |
| d2rhwa1 | 283 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 100.0 | |
| d1a8qa_ | 274 | Bromoperoxidase A1 {Streptomyces aureofaciens [Tax | 100.0 | |
| d1brta_ | 277 | Bromoperoxidase A2 {Streptomyces aureofaciens [Tax | 100.0 | |
| d1ehya_ | 293 | Bacterial epoxide hydrolase {Agrobacterium radioba | 100.0 | |
| d1b6ga_ | 310 | Haloalkane dehalogenase {Xanthobacter autotrophicu | 100.0 | |
| d1a8sa_ | 273 | Chloroperoxidase F {Pseudomonas fluorescens [TaxId | 100.0 | |
| d1imja_ | 208 | Ccg1/TafII250-interacting factor B (Cib) {Human (H | 100.0 | |
| d1hkha_ | 279 | Gamma-lactamase {Aureobacterium sp. [TaxId: 51671] | 100.0 | |
| d1va4a_ | 271 | Arylesterase {Pseudomonas fluorescens [TaxId: 294] | 100.0 | |
| d1m33a_ | 256 | Biotin biosynthesis protein BioH {Escherichia coli | 100.0 | |
| d1mj5a_ | 298 | Haloalkane dehalogenase {Sphingomonas paucimobilis | 100.0 | |
| d1xkla_ | 258 | Salicylic acid-binding protein 2 (SABP2) {Common t | 100.0 | |
| d3c70a1 | 256 | Hydroxynitrile lyase {Rubber tree (Hevea brasilien | 100.0 | |
| d1k8qa_ | 377 | Gastric lipase {Dog (Canis familiaris) [TaxId: 961 | 100.0 | |
| d1qo7a_ | 394 | Bacterial epoxide hydrolase {Aspergillus niger [Ta | 99.97 | |
| d1r3da_ | 264 | Hypothetical protein VC1974 {Vibrio cholerae [TaxI | 99.97 | |
| d1thta_ | 302 | Myristoyl-ACP-specific thioesterase {Vibrio harvey | 99.97 | |
| d1tqha_ | 242 | Carboxylesterase Est {Bacillus stearothermophilus | 99.97 | |
| d1pjaa_ | 268 | Palmitoyl protein thioesterase 2 {Human (Homo sapi | 99.96 | |
| d2fuka1 | 218 | XC6422 protein {Xanthomonas campestris [TaxId: 339 | 99.95 | |
| d2jbwa1 | 360 | 2,6-dihydropseudooxynicotine hydrolase {Arthrobact | 99.95 | |
| d1uxoa_ | 186 | Hypothetical protein YdeN {Bacillus subtilis [TaxI | 99.93 | |
| d2vata1 | 376 | Acetyl-CoA:deacetylcephalosporin C acetyltransfera | 99.93 | |
| d2hu7a2 | 260 | Acylamino-acid-releasing enzyme, C-terminal donain | 99.92 | |
| d2h7xa1 | 283 | Picromycin polyketide synthase {Streptomyces venez | 99.92 | |
| d2pl5a1 | 362 | Homoserine O-acetyltransferase {Leptospira interro | 99.92 | |
| d2b61a1 | 357 | Homoserine O-acetyltransferase {Haemophilus influe | 99.92 | |
| d1l7aa_ | 318 | Cephalosporin C deacetylase {Bacillus subtilis [Ta | 99.92 | |
| d1ispa_ | 179 | Lipase A {Bacillus subtilis [TaxId: 1423]} | 99.92 | |
| d1xkta_ | 286 | Fatty acid synthase {Human (Homo sapiens) [TaxId: | 99.91 | |
| d1ufoa_ | 238 | Hypothetical protein TT1662 {Thermus thermophilus | 99.91 | |
| d2dsta1 | 122 | Hypothetical protein TTHA1544 {Thermus thermophilu | 99.91 | |
| d1jmkc_ | 230 | Surfactin synthetase, SrfA {Bacillus subtilis [Tax | 99.9 | |
| d1vlqa_ | 322 | Acetyl xylan esterase TM0077 {Thermotoga maritima | 99.9 | |
| d2bgra2 | 258 | Dipeptidyl peptidase IV/CD26, C-terminal domain {P | 99.89 | |
| d2i3da1 | 218 | Hypothetical protein Atu1826 {Agrobacterium tumefa | 99.87 | |
| d1jfra_ | 260 | Lipase {Streptomyces exfoliatus [TaxId: 1905]} | 99.87 | |
| d1qlwa_ | 318 | A novel bacterial esterase {Alcaligenes sp. [TaxId | 99.86 | |
| d1fj2a_ | 229 | Acyl protein thioesterase 1 {Human (Homo sapiens) | 99.86 | |
| d1xfda2 | 258 | Dipeptidyl aminopeptidase-like protein 6, DPP6, C- | 99.85 | |
| d2h1ia1 | 202 | Carboxylesterase {Bacillus cereus [TaxId: 1396]} | 99.84 | |
| d1vkha_ | 263 | Putative serine hydrolase Ydr428c {Baker's yeast ( | 99.83 | |
| d1dina_ | 233 | Dienelactone hydrolase {Pseudomonas sp., B13 [TaxI | 99.83 | |
| d3b5ea1 | 209 | Uncharacterized protein Mll8374 {Mesorhizobium lot | 99.83 | |
| d2r8ba1 | 203 | Uncharacterized protein Atu2452 {Agrobacterium tum | 99.83 | |
| d1mo2a_ | 255 | Erythromycin polyketide synthase {Saccharopolyspor | 99.82 | |
| d1cvla_ | 319 | Lipase {Chromobacterium viscosum [TaxId: 42739]} | 99.78 | |
| d1tcaa_ | 317 | Triacylglycerol lipase {Yeast (Candida antarctica) | 99.78 | |
| d2pbla1 | 261 | Uncharacterized protein TM1040_2492 {Silicibacter | 99.74 | |
| d1ex9a_ | 285 | Lipase {Pseudomonas aeruginosa [TaxId: 287]} | 99.72 | |
| d1auoa_ | 218 | Carboxylesterase {Pseudomonas fluorescens [TaxId: | 99.71 | |
| d1ju3a2 | 347 | Bacterial cocaine esterase N-terminal domain {Rhod | 99.68 | |
| d1lnsa3 | 405 | X-Prolyl dipeptidyl aminopeptidase PepX, middle do | 99.65 | |
| d1mpxa2 | 381 | Alpha-amino acid ester hydrolase {Xanthomonas citr | 99.64 | |
| d1jkma_ | 358 | Carboxylesterase {Bacillus subtilis, brefeldin A e | 99.57 | |
| d1jjia_ | 311 | Carboxylesterase {Archaeon Archaeoglobus fulgidus | 99.56 | |
| d1qfma2 | 280 | Prolyl oligopeptidase, C-terminal domain {Pig (Sus | 99.54 | |
| d1jjfa_ | 255 | Feruloyl esterase domain of the cellulosomal xylan | 99.51 | |
| d1lzla_ | 317 | Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | 99.5 | |
| d2b9va2 | 385 | Alpha-amino acid ester hydrolase {Acetobacter past | 99.43 | |
| d1u4na_ | 308 | Carboxylesterase {Alicyclobacillus acidocaldarius | 99.42 | |
| d1r88a_ | 267 | Antigen pt51/mpb51 {Mycobacterium tuberculosis [Ta | 99.4 | |
| d1sfra_ | 288 | Antigen 85a {Mycobacterium tuberculosis [TaxId: 17 | 99.4 | |
| d1dqza_ | 280 | Antigen 85c {Mycobacterium tuberculosis [TaxId: 17 | 99.36 | |
| d1ivya_ | 452 | Human 'protective protein', HPP {Human (Homo sapie | 99.31 | |
| d3c8da2 | 246 | Enterochelin esterase, catalytic domain {Shigella | 99.29 | |
| g1wht.1 | 409 | Serine carboxypeptidase II {Wheat (Triticum vulgar | 99.29 | |
| d1ei9a_ | 279 | Palmitoyl protein thioesterase 1 {Cow (Bos taurus) | 99.27 | |
| d1rp1a2 | 337 | Pancreatic lipase, N-terminal domain {Dog (Canis f | 99.13 | |
| d1bu8a2 | 338 | Pancreatic lipase, N-terminal domain {Rat (Rattus | 99.09 | |
| d1wpxa1 | 421 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 99.07 | |
| d1wb4a1 | 273 | Feruloyl esterase domain of the cellulosomal xylan | 99.05 | |
| d2d81a1 | 318 | Polyhydroxybutyrate depolymerase {Penicillium funi | 99.01 | |
| g1gxs.1 | 425 | Hydroxynitrile lyase {Sorghum (Sorghum bicolor) [T | 99.0 | |
| d1pv1a_ | 299 | Hypothetical esterase YJL068C {Baker's yeast (Sacc | 98.92 | |
| d2gzsa1 | 265 | Enterobactin and salmochelin hydrolase IroE {Esche | 98.79 | |
| d1ac5a_ | 483 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 98.78 | |
| d1ku0a_ | 388 | Lipase L1 {Bacillus stearothermophilus [TaxId: 142 | 98.62 | |
| d2h7ca1 | 532 | Mammalian carboxylesterase (liver carboxylesterase | 98.19 | |
| d1qe3a_ | 483 | Thermophilic para-nitrobenzyl esterase (PNB estera | 97.98 | |
| d1ea5a_ | 532 | Acetylcholinesterase {Pacific electric ray (Torped | 97.97 | |
| d2ha2a1 | 542 | Acetylcholinesterase {Mouse (Mus musculus) [TaxId: | 97.87 | |
| d1p0ia_ | 526 | Butyryl cholinesterase {Human (Homo sapiens) [TaxI | 97.85 | |
| d2bcea_ | 579 | Bile-salt activated lipase (cholesterol esterase) | 97.82 | |
| d1ukca_ | 517 | Esterase EstA {Aspergillus niger [TaxId: 5061]} | 97.74 | |
| d1llfa_ | 534 | Type-B carboxylesterase/lipase {Candida cylindrace | 97.72 | |
| d1thga_ | 544 | Type-B carboxylesterase/lipase {Fungus (Geotrichum | 97.64 | |
| d1dx4a_ | 571 | Acetylcholinesterase {Fruit fly (Drosophila melano | 97.54 | |
| d3tgla_ | 265 | Triacylglycerol lipase {Rhizomucor miehei [TaxId: | 96.82 | |
| d1uwca_ | 261 | Feruloyl esterase A {Aspergillus niger [TaxId: 506 | 96.81 | |
| d1lgya_ | 265 | Triacylglycerol lipase {Rhizopus niveus [TaxId: 48 | 96.81 | |
| d1tiaa_ | 271 | Triacylglycerol lipase {Penicillium camembertii [T | 96.73 | |
| d1tiba_ | 269 | Triacylglycerol lipase {Thermomyces lanuginosus, f | 96.71 | |
| d1cexa_ | 197 | Cutinase {Fungus (Fusarium solani), subsp. pisi [T | 96.23 | |
| d1qoza_ | 207 | Acetylxylan esterase {Trichoderma reesei [TaxId: 5 | 94.86 | |
| d1g66a_ | 207 | Acetylxylan esterase {Penicillium purpurogenum [Ta | 94.29 | |
| d1b74a1 | 105 | Glutamate racemase {Aquifex pyrophilus [TaxId: 271 | 82.51 |
| >d1azwa_ c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas campestris, pv. citri [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline iminopeptidase species: Xanthomonas campestris, pv. citri [TaxId: 339]
Probab=100.00 E-value=5.9e-47 Score=303.53 Aligned_cols=310 Identities=56% Similarity=1.027 Sum_probs=235.9
Q ss_pred cCCCCCCCCCccceeEeCCCceEEEEeCCCCCCCcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCC
Q 020064 13 TNLYPYVEPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLD 92 (331)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~ 92 (331)
+.++|...|+++++++++||.+++|.+.|++++|||||+||++++...+.....++.++|+||++|+||||.|+.+....
T Consensus 2 ~~~~~~~~P~~~~~i~~~dg~~i~y~~~G~~~g~pvvllHG~~g~~~~~~~~~~~l~~~~~Vi~~D~rG~G~S~~~~~~~ 81 (313)
T d1azwa_ 2 RTLYPEITPYQQGSLKVDDRHTLYFEQCGNPHGKPVVMLHGGPGGGCNDKMRRFHDPAKYRIVLFDQRGSGRSTPHADLV 81 (313)
T ss_dssp CCCCCCCCCSEEEEEECSSSCEEEEEEEECTTSEEEEEECSTTTTCCCGGGGGGSCTTTEEEEEECCTTSTTSBSTTCCT
T ss_pred cccCCCCCCCCCCEEEeCCCcEEEEEEecCCCCCEEEEECCCCCCccchHHHhHHhhcCCEEEEEeccccCCCCcccccc
Confidence 35677778899999999999999999999989999999999988877777777777899999999999999998766556
Q ss_pred ccchHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHh
Q 020064 93 QNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWES 172 (331)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (331)
.++++++++|+.+++++++.++++|+||||||.+++.+|.++|+++++++++++.......................+..
T Consensus 82 ~~~~~~~~~dl~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (313)
T d1azwa_ 82 DNTTWDLVADIERLRTHLGVDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIFLLRRFELEWFYQEGASRLFPDAWEH 161 (313)
T ss_dssp TCCHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCHHHHHHHHTSSHHHHCHHHHHH
T ss_pred chhHHHHHHHHHHHHHhhccccceeEEecCCcHHHHHHHHHhhhceeeeeEeccccccccchhhhhhcccchhhhHHHHH
Confidence 78999999999999999999999999999999999999999999999999999877766555554444444455555666
Q ss_pred hhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCC
Q 020064 173 FRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFP 252 (331)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (331)
+...+...............+..............|........................+...+......++.......
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (313)
T d1azwa_ 162 YLNAIPPVERADLMSAFHRRLTSDDEATRLAAAKAWSVWEGATSFLHVDEDFVTGHEDAHFALAFARIENHYFVNGGFFE 241 (313)
T ss_dssp HHHTSCGGGTTSHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHTCHHHHHHHHHHHHHHHHTGGGCS
T ss_pred HHHhhhhhhhhhhhhhhhhhhcCccHHHHHHHHHhhhhccccccccccchhhhcccchhHHHHHHhHHHHHHHhhccccc
Confidence 66665555555555455555555555555555555555555555555555555544444455555555555544444443
Q ss_pred Ccchh-hhhccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHH
Q 020064 253 SDSFL-LDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKL 323 (331)
Q Consensus 253 ~~~~~-~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~f 323 (331)
..... ......+ ++|+|+|+|++|.++|++.++.+.+.+|++++++++++||+++.++..+++++++.+|
T Consensus 242 ~~~~~~~~~~~~~-~~P~lii~G~~D~~~p~~~~~~l~~~~p~a~~~~i~~aGH~~~ep~~~~~li~a~~~f 312 (313)
T d1azwa_ 242 VEDQLLRDAHRIA-DIPGVIVHGRYDVVCPLQSAWDLHKAWPKAQLQISPASGHSAFEPENVDALVRATDGF 312 (313)
T ss_dssp STTHHHHTGGGGT-TCCEEEEEETTCSSSCHHHHHHHHHHCTTSEEEEETTCCSSTTSHHHHHHHHHHHHHH
T ss_pred cchhhhHhhhhcC-CCCEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCchHHHHHHHHHHHh
Confidence 23333 3455667 6999999999999999999999999999999999999999987444466777777777
|
| >d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens [TaxId: 615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline aminopeptidase species: Serratia marcescens [TaxId: 615]
Probab=100.00 E-value=3.1e-41 Score=269.68 Aligned_cols=308 Identities=51% Similarity=1.003 Sum_probs=201.5
Q ss_pred CCCCCCCCCccceeEeCCCceEEEEeCCCCCCCcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCc
Q 020064 14 NLYPYVEPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQ 93 (331)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~ 93 (331)
.++|+..|++++++++.||.+|+|.+.|++++|||||+||++++...|.....+++++|+||++|+||||.|........
T Consensus 3 ~~~p~~~p~~~~~v~~~dG~~i~y~~~G~~~g~pvvllHG~~~~~~~w~~~~~~l~~~~~vi~~D~rG~G~S~~~~~~~~ 82 (313)
T d1wm1a_ 3 GLYPPLAAYDSGWLDTGDGHRIYWELSGNPNGKPAVFIHGGPGGGISPHHRQLFDPERYKVLLFDQRGCGRSRPHASLDN 82 (313)
T ss_dssp CCCCCCCCSEEEEEECSSSCEEEEEEEECTTSEEEEEECCTTTCCCCGGGGGGSCTTTEEEEEECCTTSTTCBSTTCCTT
T ss_pred ccCCCCCCCcCCEEEeCCCcEEEEEEecCCCCCeEEEECCCCCcccchHHHHHHhhcCCEEEEEeCCCcccccccccccc
Confidence 46788889999999999999999999999889999999999888777777777788999999999999999987766667
Q ss_pred cchHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhh
Q 020064 94 NTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESF 173 (331)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (331)
++...+++|+..+++.++.++++++|||+||.+++.+|..+|+++++++++++...........................
T Consensus 83 ~~~~~~~~d~~~~~~~~~~~~~~~vg~s~g~~~~~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (313)
T d1wm1a_ 83 NTTWHLVADIERLREMAGVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFTLRKQRLHWYYQDGASRFFPEKWERV 162 (313)
T ss_dssp CSHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCHHHHHHHHTSSGGGTSHHHHHHH
T ss_pred cchhhHHHHHHhhhhccCCCcceeEeeecCCchhhHHHHHHhhhheeeeecccccccccccccccccccchhhhhhhhhh
Confidence 88999999999999999999999999999999999999999999999999998766543333222222222222222222
Q ss_pred hccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCC-
Q 020064 174 RDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFP- 252 (331)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 252 (331)
...................................................... ........................
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (313)
T d1wm1a_ 163 LSILSDDERKDVIAAYRQRLTSADPQVQLEAAKLWSVWEGETVTLLPSRESASF-GEDDFALAFARIENHYFTHLGFLES 241 (313)
T ss_dssp HTTSCTTGGGCHHHHHHHHHTCSCHHHHHHHHHHHHHHHHTTSSSSCCGGGGGG-GCHHHHHHHHHHHHHHHHTGGGCSS
T ss_pred hhhhhhhhhhhhhhhhhhcccchhhhhhhhhhhhhhhhhhhhhhcccchhhhhh-hhhhHHhhhhhhhhhhhhhhccccc
Confidence 222222221112222222222222222222222222222222222222222221 111122222221111111111111
Q ss_pred CcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHH
Q 020064 253 SDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKL 323 (331)
Q Consensus 253 ~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~f 323 (331)
........+..+ ++||++|+|++|.++|++.++.+++.+|++++++++++||+++.++..+++++++.+|
T Consensus 242 ~~~~~~~~~~~~-~~Pvlii~G~~D~~~p~~~~~~l~~~~p~a~~~~i~~aGH~~~eP~~~~~lv~a~~~f 311 (313)
T d1wm1a_ 242 DDQLLRNVPLIR-HIPAVIVHGRYDMACQVQNAWDLAKAWPEAELHIVEGAGHSYDEPGILHQLMIATDRF 311 (313)
T ss_dssp TTHHHHTGGGGT-TSCEEEEEETTCSSSCHHHHHHHHHHCTTSEEEEETTCCSSTTSHHHHHHHHHHHHHH
T ss_pred chhhhhhhhhhC-CCCEEEEEECCCCccCHHHHHHHHHHCCCCEEEEECCCCCCcCCchHHHHHHHHHHHh
Confidence 123334566677 6999999999999999999999999999999999999999764322233444445554
|
| >d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC {Streptomyces purpurascens [TaxId: 1924]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Aclacinomycin methylesterase RdmC domain: Aclacinomycin methylesterase RdmC species: Streptomyces purpurascens [TaxId: 1924]
Probab=100.00 E-value=1.6e-41 Score=269.92 Aligned_cols=288 Identities=15% Similarity=0.165 Sum_probs=182.7
Q ss_pred cceeEeCCCceEEEEeCCCCCCCcEEEeccCCCCCCCC-C-cccccCCCCcEEEEecCCCCCCCCCCC-CCCccchHHHH
Q 020064 24 TGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTP-S-NRRFFDPDFYRIILFDQRGAGKSTPHA-CLDQNTTWDLI 100 (331)
Q Consensus 24 ~~~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~~~-~-~~~~~~~~g~~vi~~D~~G~G~s~~~~-~~~~~~~~~~~ 100 (331)
++.+++.+ .+|+|.+.|++++|+|||+||++.+...| . +...++++||+|+++|+||||.|.... ....+++++++
T Consensus 2 e~~~~~g~-~~i~y~~~G~~~~p~vvl~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 80 (297)
T d1q0ra_ 2 ERIVPSGD-VELWSDDFGDPADPALLLVMGGNLSALGWPDEFARRLADGGLHVIRYDHRDTGRSTTRDFAAHPYGFGELA 80 (297)
T ss_dssp EEEEEETT-EEEEEEEESCTTSCEEEEECCTTCCGGGSCHHHHHHHHTTTCEEEEECCTTSTTSCCCCTTTSCCCHHHHH
T ss_pred CeEEEECC-EEEEEEEecCCCCCEEEEECCCCcChhHHHHHHHHHHHhCCCEEEEEeCCCCcccccccccccccccchhh
Confidence 45566655 59999999998899999999987765543 3 456777899999999999999997543 22457999999
Q ss_pred HHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhc--ccccCChhhHHhhhccCC
Q 020064 101 DDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEG--GAAAIYPDAWESFRDLIP 178 (331)
Q Consensus 101 ~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 178 (331)
+|+..++++++.++++++||||||.+++.+|..+|++|+++|++++.............. ...... ...
T Consensus 81 ~d~~~ll~~l~~~~~~lvGhS~Gg~~a~~~a~~~P~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~---------~~~ 151 (297)
T d1q0ra_ 81 ADAVAVLDGWGVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDANIERVMRGEPTLD---------GLP 151 (297)
T ss_dssp HHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCTTCCHHHHHHHHHHTCCCSS---------CSC
T ss_pred hhhccccccccccceeeccccccchhhhhhhcccccceeeeEEEccccccccchhhhHHHhhhhhhhh---------hhh
Confidence 999999999999999999999999999999999999999999998765543221111110 000000 000
Q ss_pred cchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcC-CCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchh
Q 020064 179 ENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHL-LPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFL 257 (331)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (331)
. ........+.......... .......+..+....... ............... ..........+..........+.
T Consensus 152 ~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 228 (297)
T d1q0ra_ 152 G-PQQPFLDALALMNQPAEGR-AAEVAKRVSKWRILSGTGVPFDDAEYARWEERAI-DHAGGVLAEPYAHYSLTLPPPSR 228 (297)
T ss_dssp C-CCHHHHHHHHHHHSCCCSH-HHHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHH-HHTTTCCSCCCGGGGCCCCCGGG
T ss_pred h-hhHHHHHHHHHhccccchh-hHHHHHHHHHHhhhccccccchHHHHHHHHHHhh-hhccccchhhhhhhhhhhccccc
Confidence 0 0000011100000000000 000011111111111110 111111110000000 00000000011111111123456
Q ss_pred hhhccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHh
Q 020064 258 LDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNL 326 (331)
Q Consensus 258 ~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 326 (331)
...+.+| ++|+++|+|++|.++|++.++.+.+.+|++++++++++||+++.+. |+++++.|.+|++.
T Consensus 229 ~~~l~~i-~~Pvlvi~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e~-p~~~~~~i~~~l~~ 295 (297)
T d1q0ra_ 229 AAELREV-TVPTLVIQAEHDPIAPAPHGKHLAGLIPTARLAEIPGMGHALPSSV-HGPLAEVILAHTRS 295 (297)
T ss_dssp GGGGGGC-CSCEEEEEETTCSSSCTTHHHHHHHTSTTEEEEEETTCCSSCCGGG-HHHHHHHHHHHHHH
T ss_pred hhhhhcc-CCceEEEEeCCCCCCCHHHHHHHHHhCCCCEEEEECCCCCcchhhC-HHHHHHHHHHHHHh
Confidence 6788999 5999999999999999999999999999999999999999999997 99999999999975
|
| >d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC {Janthinobacterium sp. J3 [TaxId: 213804]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta cleavage compound hydrolase CarC species: Janthinobacterium sp. J3 [TaxId: 213804]
Probab=100.00 E-value=2.2e-40 Score=259.37 Aligned_cols=262 Identities=19% Similarity=0.205 Sum_probs=173.3
Q ss_pred CccceeEeCCCceEEEEeCCCCCCCcEEEeccCCCCCC---CCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHH
Q 020064 22 YSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGT---TPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWD 98 (331)
Q Consensus 22 ~~~~~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~---~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~ 98 (331)
+.++++++ ||.+++|.+.| ++|+|||+||++++.. .|......++++|+|+++|+||||.|+.+. ...+.++
T Consensus 2 ~~~~~~~~-dg~~l~y~~~G--~g~~vvllHG~~~~~~~~~~~~~~~~~l~~~~~v~~~D~~G~G~S~~~~--~~~~~~~ 76 (268)
T d1j1ia_ 2 YVERFVNA-GGVETRYLEAG--KGQPVILIHGGGAGAESEGNWRNVIPILARHYRVIAMDMLGFGKTAKPD--IEYTQDR 76 (268)
T ss_dssp CEEEEEEE-TTEEEEEEEEC--CSSEEEEECCCSTTCCHHHHHTTTHHHHTTTSEEEEECCTTSTTSCCCS--SCCCHHH
T ss_pred CcCeEEEE-CCEEEEEEEEc--CCCeEEEECCCCCCccHHHHHHHHHHHHhcCCEEEEEcccccccccCCc--ccccccc
Confidence 35677877 77899999999 6789999999766543 133333344679999999999999998765 4678999
Q ss_pred HHHHHHHHHHHhCCC-cEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccC
Q 020064 99 LIDDIEKLRQHLEIP-EWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLI 177 (331)
Q Consensus 99 ~~~~~~~~~~~~~~~-~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (331)
+++++.++++.++.+ +++++|||+||.+++.+|.++|++|+++|+++++............. .....
T Consensus 77 ~~~~~~~~i~~l~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~------------~~~~~ 144 (268)
T d1j1ia_ 77 RIRHLHDFIKAMNFDGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIHEDLRPI------------INYDF 144 (268)
T ss_dssp HHHHHHHHHHHSCCSSCEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESCCBCCCC----------------------CCS
T ss_pred ccccchhhHHHhhhcccceeeeccccccccchhhccChHhhheeeecCCCccccccchhhhhh------------hhhhh
Confidence 999999999999874 79999999999999999999999999999999865432211111000 00000
Q ss_pred CcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchh
Q 020064 178 PENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFL 257 (331)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (331)
................................ .......+............ ....
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~----~~~~ 200 (268)
T d1j1ia_ 145 TREGMVHLVKALTNDGFKIDDAMINSRYTYAT--------------------DEATRKAYVATMQWIREQGG----LFYD 200 (268)
T ss_dssp CHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHH--------------------SHHHHHHHHHHHHHHHHHTS----SBCC
T ss_pred hhhhhHHHHHHHhhhhhhhhhhhhHHHHHhhh--------------------hhhhhhhhhhhhhhhhcccc----ccch
Confidence 00111111111111111111111000000000 00000000000000000000 1223
Q ss_pred hhhccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHh
Q 020064 258 LDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNL 326 (331)
Q Consensus 258 ~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 326 (331)
.+.+.++ ++|+|+|+|++|.++|++.++.+.+.+|++++++++++||+++.++ |+++.+.|.+||++
T Consensus 201 ~~~l~~i-~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~-p~~~~~~i~~FL~~ 267 (268)
T d1j1ia_ 201 PEFIRKV-QVPTLVVQGKDDKVVPVETAYKFLDLIDDSWGYIIPHCGHWAMIEH-PEDFANATLSFLSL 267 (268)
T ss_dssp HHHHTTC-CSCEEEEEETTCSSSCHHHHHHHHHHCTTEEEEEESSCCSCHHHHS-HHHHHHHHHHHHHH
T ss_pred hhhHhhC-CCCEEEEEeCCCCCCCHHHHHHHHHhCCCCEEEEECCCCCchHHhC-HHHHHHHHHHHHcC
Confidence 4567888 6999999999999999999999999999999999999999999997 99999999999975
|
| >d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Rhodococcus sp. [TaxId: 1831]
Probab=100.00 E-value=9.8e-41 Score=264.46 Aligned_cols=280 Identities=16% Similarity=0.111 Sum_probs=179.8
Q ss_pred CCCCccceeEeCCCceEEEEeCCCCCCCcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHH
Q 020064 19 VEPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWD 98 (331)
Q Consensus 19 ~~~~~~~~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~ 98 (331)
..|++.++++++ |.+++|...|++++|+|||+||++++...|......+.++|+|+++|+||||.|+.+. ..++.++
T Consensus 4 ~~p~~~~~i~~~-g~~i~y~~~G~~~~p~lvllHG~~~~~~~~~~~~~~L~~~~~vi~~d~~G~G~S~~~~--~~~~~~~ 80 (291)
T d1bn7a_ 4 GFPFDPHYVEVL-GERMHYVDVGPRDGTPVLFLHGNPTSSYLWRNIIPHVAPSHRCIAPDLIGMGKSDKPD--LDYFFDD 80 (291)
T ss_dssp CCCCCCEEEEET-TEEEEEEEESCSSSSCEEEECCTTCCGGGGTTTHHHHTTTSCEEEECCTTSTTSCCCS--CCCCHHH
T ss_pred CCCCCCeEEEEC-CEEEEEEEeCCCCCCeEEEECCCCCCHHHHHHHHHHHhcCCEEEEEeCCCCccccccc--cccchhH
Confidence 356778899985 5599999999888999999999877755544443444679999999999999998765 4688999
Q ss_pred HHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhh--Hhhcc-cccCChhhHHhhhc
Q 020064 99 LIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDW--FYEGG-AAAIYPDAWESFRD 175 (331)
Q Consensus 99 ~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~ 175 (331)
+++|+.+++++++.++++++||||||.+++.++.++|+++++++++++.........+ ..... ..............
T Consensus 81 ~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (291)
T d1bn7a_ 81 HVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPIPTWDEWPEFARETFQAFRTADVGRELII 160 (291)
T ss_dssp HHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHHHHHCGGGEEEEEEEEECCCBCSGGGSCHHHHHHHHHHTSTTHHHHHHT
T ss_pred HHHHHhhhhhhhccccccccccccccchhHHHHHhCCcceeeeeeeccccCCccchhhhhhhhhHHHHHhhhhhHHHhhh
Confidence 9999999999999999999999999999999999999999999999866543211110 00000 00000000000000
Q ss_pred cCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCC---
Q 020064 176 LIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFP--- 252 (331)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 252 (331)
.. .......... ................ ................... ......
T Consensus 161 ~~-~~~~~~~~~~---~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 216 (291)
T d1bn7a_ 161 DQ-NAFIEGVLPK---CVVRPLTEVEMDHYRE-------------------PFLKPVDREPLWRFPNEIP-IAGEPANIV 216 (291)
T ss_dssp TS-CHHHHTHHHH---TCSSCCCHHHHHHHHG-------------------GGSSGGGGHHHHHHHHHSC-BTTBSHHHH
T ss_pred hh-hhhHHhhhhh---hccccchHHHHHHHHH-------------------HhcchhhhHHHHHHHHHhh-hhhhhchhh
Confidence 00 0000000000 0000000000000000 0000000000000000000 000000
Q ss_pred -CcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhh
Q 020064 253 -SDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNLI 327 (331)
Q Consensus 253 -~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 327 (331)
........+.++ ++|+|+++|++|.++|++.++++.+.+|++++++++++||+++.++ |+++.+.|.+||+.+
T Consensus 217 ~~~~~~~~~~~~i-~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~-p~~v~~~i~~fL~~l 290 (291)
T d1bn7a_ 217 ALVEAYMNWLHQS-PVPKLLFWGTPGVLIPPAEAARLAESLPNCKTVDIGPGLHYLQEDN-PDLIGSEIARWLPGL 290 (291)
T ss_dssp HHHHHHHHHHHHC-CSCEEEEEEEECSSSCHHHHHHHHHHSTTEEEEEEEEESSCGGGTC-HHHHHHHHHHHSGGG
T ss_pred hhhhhhhhhhhcC-CCCEEEEEeCCCCCcCHHHHHHHHHHCCCCEEEEECCCCCchHHhC-HHHHHHHHHHHHHhh
Confidence 011223456778 6999999999999999999999999999999999999999999997 999999999999876
|
| >d1mtza_ c.69.1.7 (A:) Tricorn interacting factor F1 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Tricorn interacting factor F1 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=100.00 E-value=1.8e-39 Score=256.76 Aligned_cols=282 Identities=21% Similarity=0.246 Sum_probs=179.6
Q ss_pred ccceeEeCCCceEEEEeCCCCC-CCcEEEeccCCC-CCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHH
Q 020064 23 STGILKVSDIHTIYWEQSGNPT-GHPVVFLHGGPG-GGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLI 100 (331)
Q Consensus 23 ~~~~~~~~~g~~l~~~~~g~~~-~~~vl~~HG~~~-~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~ 100 (331)
.+.++++ +|.+++|...|+++ +|+||++||+++ +..|+..+..++++||+|+++|+||||.|+.+.. ..+++++++
T Consensus 3 ~~~~~~~-~g~~i~y~~~g~~~~~~~iv~lHG~~g~~~~~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~-~~~~~~~~~ 80 (290)
T d1mtza_ 3 IENYAKV-NGIYIYYKLCKAPEEKAKLMTMHGGPGMSHDYLLSLRDMTKEGITVLFYDQFGCGRSEEPDQ-SKFTIDYGV 80 (290)
T ss_dssp EEEEEEE-TTEEEEEEEECCSSCSEEEEEECCTTTCCSGGGGGGGGGGGGTEEEEEECCTTSTTSCCCCG-GGCSHHHHH
T ss_pred ccCeEEE-CCEEEEEEEcCCCCCCCeEEEECCCCCchHHHHHHHHHHHHCCCEEEEEeCCCCcccccccc-ccccccchh
Confidence 4567887 66699999999654 467999999865 4556777778888999999999999999986543 468899999
Q ss_pred HHHHHHHHHh-CCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCc
Q 020064 101 DDIEKLRQHL-EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPE 179 (331)
Q Consensus 101 ~~~~~~~~~~-~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (331)
+|+.++++++ +.++++++||||||.+++.+|.++|++|+++|++++............. .......
T Consensus 81 ~~l~~ll~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~-------------~~~~~~~ 147 (290)
T d1mtza_ 81 EEAEALRSKLFGNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSVPLTVKEMNR-------------LIDELPA 147 (290)
T ss_dssp HHHHHHHHHHHTTCCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBHHHHHHHHHH-------------HHHTSCH
T ss_pred hhhhhhhcccccccccceecccccchhhhhhhhcChhhheeeeecccccCcccchhhhhh-------------hhhhhhH
Confidence 9999999997 7889999999999999999999999999999999987654332211111 0000110
Q ss_pred chhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhh-hhhhhhccCCCCCcchhh
Q 020064 180 NERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARI-ENHYFLNKGFFPSDSFLL 258 (331)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 258 (331)
..... ......................+. ..........+.................. ....+...... ...+..
T Consensus 148 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 223 (290)
T d1mtza_ 148 KYRDA-IKKYGSSGSYENPEYQEAVNYFYH--QHLLRSEDWPPEVLKSLEYAERRNVYRIMNGPNEFTITGTI-KDWDIT 223 (290)
T ss_dssp HHHHH-HHHHHHHTCTTCHHHHHHHHHHHH--HHTSCSSCCCHHHHHHHHHHHHSSHHHHHTCSBTTBCCSTT-TTCBCT
T ss_pred HHHHH-HHHhhhhccccchhHHHHHHHHhh--hhhcccccchHHHHHHHHHHhhhhhhhhhcchhHHhHhhhh-hcccHH
Confidence 00000 001111111111110000000000 00000001111111100000000000000 00011111111 134556
Q ss_pred hhccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHh
Q 020064 259 DNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNL 326 (331)
Q Consensus 259 ~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 326 (331)
..+.++ ++|+++++|++|.++| +.++.+.+.+|++++++++++||+++.++ |+++.+.|.+||.+
T Consensus 224 ~~~~~i-~~P~l~i~G~~D~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~e~-p~~~~~~i~~FL~~ 288 (290)
T d1mtza_ 224 DKISAI-KIPTLITVGEYDEVTP-NVARVIHEKIAGSELHVFRDCSHLTMWED-REGYNKLLSDFILK 288 (290)
T ss_dssp TTGGGC-CSCEEEEEETTCSSCH-HHHHHHHHHSTTCEEEEETTCCSCHHHHS-HHHHHHHHHHHHHT
T ss_pred HHhhcc-cceEEEEEeCCCCCCH-HHHHHHHHHCCCCEEEEECCCCCchHHhC-HHHHHHHHHHHHHH
Confidence 678889 5999999999999876 67888999999999999999999999997 99999999999986
|
| >d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta-cleavage product hydrolase CumD species: Pseudomonas fluorescens [TaxId: 294]
Probab=100.00 E-value=5.2e-39 Score=251.89 Aligned_cols=263 Identities=19% Similarity=0.170 Sum_probs=171.2
Q ss_pred cceeEeCCCceEEEEeCCCCCCCcEEEeccCCCCCC-C--CCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHH
Q 020064 24 TGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGT-T--PSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLI 100 (331)
Q Consensus 24 ~~~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~-~--~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~ 100 (331)
.....+.+|.+++|.+.| ++|||||+||++++.. + |......++++|+|+++|+||||.|..+.. ...+.++++
T Consensus 4 ~~~~i~~~G~~~~Y~~~G--~G~pvvllHG~~~~~~~~~~~~~~~~~l~~~~~vi~~Dl~G~G~S~~~~~-~~~~~~~~~ 80 (271)
T d1uk8a_ 4 IGKSILAAGVLTNYHDVG--EGQPVILIHGSGPGVSAYANWRLTIPALSKFYRVIAPDMVGFGFTDRPEN-YNYSKDSWV 80 (271)
T ss_dssp CCEEEEETTEEEEEEEEC--CSSEEEEECCCSTTCCHHHHHTTTHHHHTTTSEEEEECCTTSTTSCCCTT-CCCCHHHHH
T ss_pred CCCEEEECCEEEEEEEEe--eCCeEEEECCCCCCccHHHHHHHHHHHHhCCCEEEEEeCCCCCCcccccc-ccccccccc
Confidence 334445577799999999 6899999999765533 2 223333336799999999999999986553 456789999
Q ss_pred HHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcc
Q 020064 101 DDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPEN 180 (331)
Q Consensus 101 ~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (331)
+++..+++.++.++++++||||||.+++.+|.++|++++++|++++.......... +..........
T Consensus 81 ~~~~~~~~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~~~~lil~~~~~~~~~~~~~-------------~~~~~~~~~~~ 147 (271)
T d1uk8a_ 81 DHIIGIMDALEIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDVTEG-------------LNAVWGYTPSI 147 (271)
T ss_dssp HHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCSCCCCCHH-------------HHHHHTCCSCH
T ss_pred hhhhhhhhhhcCCCceEeeccccceeehHHHHhhhccchheeecccCCCcccchhh-------------hhhhhhccchh
Confidence 99999999999999999999999999999999999999999999886543211111 00000000000
Q ss_pred -hhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhh
Q 020064 181 -ERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLD 259 (331)
Q Consensus 181 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (331)
........+................... ...................... . ......
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~--------~------~~~~~~ 205 (271)
T d1uk8a_ 148 ENMRNLLDIFAYDRSLVTDELARLRYEAS--------IQPGFQESFSSMFPEPRQRWID--------A------LASSDE 205 (271)
T ss_dssp HHHHHHHHHHCSCGGGCCHHHHHHHHHHH--------TSTTHHHHHHTTSCSSTHHHHH--------H------HCCCHH
T ss_pred HHHHHHHHHHhhhcccchhHHHHHHHhhh--------hchhHHHHHHhhcchhhhhhhh--------h------ccccHH
Confidence 0001111111000000000000000000 0000000000000000000000 0 122335
Q ss_pred hccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHh
Q 020064 260 NIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNL 326 (331)
Q Consensus 260 ~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 326 (331)
.+.++ ++|+|+|+|++|.++|++..+.+.+.+|++++++++++||+++.++ |+++++.|.+||++
T Consensus 206 ~l~~i-~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~-p~~~~~~i~~Fl~e 270 (271)
T d1uk8a_ 206 DIKTL-PNETLIIHGREDQVVPLSSSLRLGELIDRAQLHVFGRCGHWTQIEQ-TDRFNRLVVEFFNE 270 (271)
T ss_dssp HHTTC-CSCEEEEEETTCSSSCHHHHHHHHHHCTTEEEEEESSCCSCHHHHT-HHHHHHHHHHHHHT
T ss_pred HHHhh-ccceeEEecCCCCCcCHHHHHHHHHhCCCCEEEEECCCCCchHHHC-HHHHHHHHHHHHhc
Confidence 67888 5999999999999999999999999999999999999999999997 99999999999985
|
| >d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Mammalian epoxide hydrolase, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.7e-40 Score=265.76 Aligned_cols=295 Identities=15% Similarity=0.089 Sum_probs=182.5
Q ss_pred CCccceeEeCCCceEEEEeCCCCCCCcEEEeccCCCCCC-CCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHH
Q 020064 21 PYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGT-TPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDL 99 (331)
Q Consensus 21 ~~~~~~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~-~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~ 99 (331)
.....++++.||.+|+|.+.| ++|+|||+||++++.. |...+..+.++||+||++|+||||.|..+.....++.+++
T Consensus 10 ~~~~~~v~~~~g~~i~y~~~G--~gp~vlllHG~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 87 (322)
T d1zd3a2 10 DMSHGYVTVKPRVRLHFVELG--SGPAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESSAPPEIEEYCMEVL 87 (322)
T ss_dssp GSEEEEEEEETTEEEEEEEEC--CSSEEEEECCTTCCGGGGTTHHHHHHHTTCEEEEEECTTSTTSCCCSCGGGGSHHHH
T ss_pred CCceeEEEECCCCEEEEEEEc--CCCeEEEECCCCCCHHHHHHHHHHHHHCCCEEEEecccccccccccccccccccccc
Confidence 566789999999999999999 6899999999877654 4556666767899999999999999987765566889999
Q ss_pred HHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCc
Q 020064 100 IDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPE 179 (331)
Q Consensus 100 ~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (331)
++++.+++++++.++++++||||||.+++.+|.++|++++++|+++++............... ..+..+.........
T Consensus 88 ~~~i~~l~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 165 (322)
T d1zd3a2 88 CKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLESIK--ANPVFDYQLYFQEPG 165 (322)
T ss_dssp HHHHHHHHHHHTCSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCCCCCSSSCHHHHHH--TCGGGHHHHHTTSTT
T ss_pred chhhhhhhhcccccccccccccchHHHHHHHHHhCCccccceEEEcccccccccccchhhhhh--ccchhhhHHhhhccc
Confidence 999999999999999999999999999999999999999999999875442211000000000 000000000000000
Q ss_pred chhh-------hhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCcc----HHHHHHhhhhhhhhhcc
Q 020064 180 NERS-------CFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDD----IFSLAFARIENHYFLNK 248 (331)
Q Consensus 180 ~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 248 (331)
.... .....+.......... .......+.. . ............... .+...+...........
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (322)
T d1zd3a2 166 VAEAELEQNLSRTFKSLFRASDESVLS-MHKVCEAGGL---F--VNSPEEPSLSRMVTEEEIQFYVQQFKKSGFRGPLNW 239 (322)
T ss_dssp HHHHHHHHTHHHHHHHHSCCTTSCCCC-TTSHHHHTSS---S--TTSCSSCCCCTTCCHHHHHHHHHHHHHHTTHHHHHT
T ss_pred hhhhhhhhhHHHHHHHHhhccchhhhh-HHHHhhhhcc---c--cccccchhhhhhccHHHHHHHHHHHhhccccccccc
Confidence 0000 0000000000000000 0000000000 0 000000000000000 01111111000000000
Q ss_pred C-CC--CCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHH
Q 020064 249 G-FF--PSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKN 325 (331)
Q Consensus 249 ~-~~--~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~ 325 (331)
. .. ....+......++ ++|||+|+|++|.+++++..+.+.+.+|++++++++++||+++.|+ |+++.+.|.+||+
T Consensus 240 ~~~~~~~~~~~~~~~~~~i-~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~-p~~v~~~i~~FL~ 317 (322)
T d1zd3a2 240 YRNMERNWKWACKSLGRKI-LIPALMVTAEKDFVLVPQMSQHMEDWIPHLKRGHIEDCGHWTQMDK-PTEVNQILIKWLD 317 (322)
T ss_dssp TSCHHHHHHHHHTTTTCCC-CSCEEEEEETTCSSSCGGGGTTGGGTCTTCEEEEETTCCSCHHHHS-HHHHHHHHHHHHH
T ss_pred ccccccccccchhhhcccC-CCCEEEEEeCCCCCCCHHHHHHHHHhCCCCEEEEECCCCCchHHhC-HHHHHHHHHHHHh
Confidence 0 00 0011233456778 5999999999999999999999999999999999999999999997 9999999999998
Q ss_pred hh
Q 020064 326 LI 327 (331)
Q Consensus 326 ~~ 327 (331)
+-
T Consensus 318 ~~ 319 (322)
T d1zd3a2 318 SD 319 (322)
T ss_dssp HH
T ss_pred hc
Confidence 64
|
| >d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Rhodococcus sp., strain rha1 [TaxId: 1831]
Probab=100.00 E-value=3.8e-39 Score=254.05 Aligned_cols=267 Identities=14% Similarity=0.124 Sum_probs=170.6
Q ss_pred cceeEeCCCceEEEEeCCCCCCCcEEEeccCCCCCC----CCCcccccCCCCcEEEEecCCCCCCCCCCCCCCc---cch
Q 020064 24 TGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGT----TPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQ---NTT 96 (331)
Q Consensus 24 ~~~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~----~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~---~~~ 96 (331)
++.+++ ++.+++|...|++++|+|||+||++++.. |...+..+ +++|+|+++|+||||.|+....... .+.
T Consensus 6 ~~~~~~-~~~~~h~~~~G~~~~p~ivllHG~~~~~~~~~~~~~~~~~L-~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 83 (281)
T d1c4xa_ 6 EKRFPS-GTLASHALVAGDPQSPAVVLLHGAGPGAHAASNWRPIIPDL-AENFFVVAPDLIGFGQSEYPETYPGHIMSWV 83 (281)
T ss_dssp EEEECC-TTSCEEEEEESCTTSCEEEEECCCSTTCCHHHHHGGGHHHH-HTTSEEEEECCTTSTTSCCCSSCCSSHHHHH
T ss_pred EEEEcc-CCEEEEEEEEecCCCCEEEEECCCCCCCcHHHHHHHHHHHH-hCCCEEEEEeCCCCccccccccccccchhhH
Confidence 444544 33599999999999999999999765433 23344444 5699999999999999986553222 456
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhcc
Q 020064 97 WDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDL 176 (331)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (331)
+++++++.++++.++.++++++||||||.+++.+|.++|++++++|++++........ +..+......
T Consensus 84 ~~~~~~i~~~i~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~~~~~~------------~~~~~~~~~~ 151 (281)
T d1c4xa_ 84 GMRVEQILGLMNHFGIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMNAR------------PPELARLLAF 151 (281)
T ss_dssp HHHHHHHHHHHHHHTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCSSC------------CHHHHHHHTG
T ss_pred HHhhhhccccccccccccceeccccccccccccccccccccccceEEeccccCccccc------------hhHHHHHHHh
Confidence 6789999999999999999999999999999999999999999999999865432110 1111111111
Q ss_pred CCcchhhhhHHhhccccCCCch-HHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcc
Q 020064 177 IPENERSCFVDAYSKRLNSDDK-ETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDS 255 (331)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (331)
............+......... .............. .............. ..........
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~--~~~~~~~~~~ 212 (281)
T d1c4xa_ 152 YADPRLTPYRELIHSFVYDPENFPGMEEIVKSRFEVA-----------------NDPEVRRIQEVMFE--SMKAGMESLV 212 (281)
T ss_dssp GGSCCHHHHHHHHHTTSSCSTTCTTHHHHHHHHHHHH-----------------HCHHHHHHHHHHHH--HHSSCCGGGC
T ss_pred hhhcccchhhhhhhhhcccccccchhhhHHHHHhhhc-----------------ccchhhhhhhhhhh--HHhhhhhhhc
Confidence 1111100111111000000000 00000000000000 00000000000000 0000111122
Q ss_pred hhhhhccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHH
Q 020064 256 FLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKN 325 (331)
Q Consensus 256 ~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~ 325 (331)
.....+.++ ++|+|+|+|++|.++|++.++.+.+.+|++++++++++||+++.|+ |+++++.|.+||+
T Consensus 213 ~~~~~l~~i-~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~-p~~~~~~i~~Fl~ 280 (281)
T d1c4xa_ 213 IPPATLGRL-PHDVLVFHGRQDRIVPLDTSLYLTKHLKHAELVVLDRCGHWAQLER-WDAMGPMLMEHFR 280 (281)
T ss_dssp CCHHHHTTC-CSCEEEEEETTCSSSCTHHHHHHHHHCSSEEEEEESSCCSCHHHHS-HHHHHHHHHHHHH
T ss_pred cchhhhhhh-ccceEEEEeCCCCCcCHHHHHHHHHHCCCCEEEEECCCCCchHHhC-HHHHHHHHHHHhC
Confidence 334567888 5999999999999999999999999999999999999999999997 9999999999997
|
| >d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans [TaxId: 1916]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase L species: Streptomyces lividans [TaxId: 1916]
Probab=100.00 E-value=8.8e-40 Score=256.77 Aligned_cols=268 Identities=20% Similarity=0.257 Sum_probs=173.1
Q ss_pred ceeEeCCCceEEEEeCCCCCCCcEEEeccCCCCCCC-CCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHH
Q 020064 25 GILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTT-PSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDI 103 (331)
Q Consensus 25 ~~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~~-~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~ 103 (331)
.++++.||.+|+|..+|++++|+|||+||++++... ...+..++++||+|+++|+||||.|+.+. ..++.+++++|+
T Consensus 1 ~~i~~~dG~~l~y~~~G~~~~~~vv~lHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~--~~~~~~~~~~~~ 78 (275)
T d1a88a_ 1 GTVTTSDGTNIFYKDWGPRDGLPVVFHHGWPLSADDWDNQMLFFLSHGYRVIAHDRRGHGRSDQPS--TGHDMDTYAADV 78 (275)
T ss_dssp CEEECTTSCEEEEEEESCTTSCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCS--SCCSHHHHHHHH
T ss_pred CEEEecCCCEEEEEEecCCCCCeEEEECCCCCCHHHHHHHHHHHHhCCCEEEEEeccccccccccc--cccccccccccc
Confidence 378999999999999999889999999997776554 45677777899999999999999998765 468999999999
Q ss_pred HHHHHHhCCCcEEEEEeCh-hHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchh
Q 020064 104 EKLRQHLEIPEWQVFGGSW-GSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENER 182 (331)
Q Consensus 104 ~~~~~~~~~~~v~lvG~S~-Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (331)
.++++.++.++++++|||+ ||.+++.+|..+|++|+++|++++........... ........+..+...+.....
T Consensus 79 ~~~l~~l~~~~~~~vg~s~~G~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 154 (275)
T d1a88a_ 79 AALTEALDLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDTN----PDGLPLEVFDEFRAALAANRA 154 (275)
T ss_dssp HHHHHHHTCCSEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCCCSCCBCBTTB----TTSBCHHHHHHHHHHHHHCHH
T ss_pred ccccccccccccccccccccccchhhcccccCcchhhhhhhhcccccccccchhh----hhhhhhhhhhhhhhhhhhhhH
Confidence 9999999999999999997 66677778899999999999999754322111000 000000111111000000000
Q ss_pred hhhHH---hhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhh
Q 020064 183 SCFVD---AYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLD 259 (331)
Q Consensus 183 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (331)
..... ........... ......... .............+....... ..+..+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 209 (275)
T d1a88a_ 155 QFYIDVPSGPFYGFNREGA--------------------TVSQGLIDH----WWLQGMMGAANAHYECIAAFS-ETDFTD 209 (275)
T ss_dssp HHHHHHHHTTTTTTTSTTC--------------------CCCHHHHHH----HHHHHHHSCHHHHHHHHHHHH-HCCCHH
T ss_pred HHHHhhhhhhhhhcccchh--------------------hHHHHHHHH----HHHhhcccchHHHHHHHHHhh-hhhhhH
Confidence 00000 00000000000 000000000 000000000000000000000 233455
Q ss_pred hccccccccEEEEecCCCCccCCcc-hHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHH
Q 020064 260 NIDNIRHINATIVQGRYDVCCPMMS-AWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKN 325 (331)
Q Consensus 260 ~l~~i~~~P~l~i~G~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~ 325 (331)
.+.++ ++|+|+++|++|.++|.+. .+.+.+.+|++++++++++||+++.++ |+++.+.|.+||+
T Consensus 210 ~l~~i-~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~-p~~~~~~i~~Fl~ 274 (275)
T d1a88a_ 210 DLKRI-DVPVLVAHGTDDQVVPYADAAPKSAELLANATLKSYEGLPHGMLSTH-PEVLNPDLLAFVK 274 (275)
T ss_dssp HHHHC-CSCEEEEEETTCSSSCSTTTHHHHHHHSTTEEEEEETTCCTTHHHHC-HHHHHHHHHHHHH
T ss_pred HHHhh-ccccceeecCCCCCcCHHHHHHHHHHhCCCCEEEEECCCCCchHHhC-HHHHHHHHHHHHc
Confidence 67888 5999999999999998754 567778889999999999999999997 9999999999997
|
| >d2rhwa1 c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Burkholderia xenovorans [TaxId: 36873]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Burkholderia xenovorans [TaxId: 36873]
Probab=100.00 E-value=4e-39 Score=254.15 Aligned_cols=265 Identities=20% Similarity=0.201 Sum_probs=172.2
Q ss_pred cceeEeCC----CceEEEEeCCCCCCCcEEEeccCCCCCCCC----CcccccCCCCcEEEEecCCCCCCCCCCCCCCccc
Q 020064 24 TGILKVSD----IHTIYWEQSGNPTGHPVVFLHGGPGGGTTP----SNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNT 95 (331)
Q Consensus 24 ~~~~~~~~----g~~l~~~~~g~~~~~~vl~~HG~~~~~~~~----~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~ 95 (331)
.+++++++ +.+|+|...| ++|+|||+||++.+...| ..+..++++||+|+++|+||||.|..... ..++
T Consensus 7 ~~~~~~~~~~~~~~~i~y~~~G--~G~~ivllHG~~~~~~~~~~~~~~l~~~~~~g~~v~~~D~~G~G~S~~~~~-~~~~ 83 (283)
T d2rhwa1 7 SKFVKINEKGFSDFNIHYNEAG--NGETVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVILKDSPGFNKSDAVVM-DEQR 83 (283)
T ss_dssp EEEEEEEETTEEEEEEEEEEEC--CSSEEEEECCCSTTCCHHHHHTTTHHHHHHTTCEEEEECCTTSTTSCCCCC-SSCH
T ss_pred CccEEecCCccCCEEEEEEEEc--CCCeEEEECCCCCChhHHHHHHHHHHHHHHCCCEEEEEeCCCCcccccccc-cccc
Confidence 45555553 3579999999 689999999977664432 33344557999999999999999986553 3466
Q ss_pred hHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhh--
Q 020064 96 TWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESF-- 173 (331)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 173 (331)
...+++|+.+++++++.++++++||||||.+++.+|.++|++++++|++++......... ..........
T Consensus 84 ~~~~~~~i~~li~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~--------~~~~~~~~~~~~ 155 (283)
T d2rhwa1 84 GLVNARAVKGLMDALDIDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFA--------PMPMEGIKLLFK 155 (283)
T ss_dssp HHHHHHHHHHHHHHHTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSS--------CSSCHHHHHHHH
T ss_pred cchhhhhcccccccccccccccccccchHHHHHHHHHHhhhhcceEEEeCCCcCCcchhh--------hhhHHHHHHHHH
Confidence 778899999999999999999999999999999999999999999999997654321100 0000000000
Q ss_pred -hccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCC
Q 020064 174 -RDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFP 252 (331)
Q Consensus 174 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (331)
...............+..................... .+ ....... ........
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~--------~~~~~~~-------~~~~~~~~ 210 (283)
T d2rhwa1 156 LYAEPSYETLKQMLQVFLYDQSLITEELLQGRWEAIQR----------QP--------EHLKNFL-------ISAQKAPL 210 (283)
T ss_dssp HHHSCCHHHHHHHHHHHCSCGGGCCHHHHHHHHHHHHH----------CH--------HHHHHHH-------HHHHHSCG
T ss_pred HhhhhhhhhHHHHHHHhhcccccCcHHHHHHHHHHhhh----------hh--------hhhhhhh-------hhhhhhhc
Confidence 0000000001111111100000000000000000000 00 0000000 00000001
Q ss_pred CcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHh
Q 020064 253 SDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNL 326 (331)
Q Consensus 253 ~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 326 (331)
...+..+.+.++ ++|+++++|++|.++|++.++.+.+.+|++++++++++||+++.++ |+++++.|.+||++
T Consensus 211 ~~~~~~~~l~~i-~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~-p~~~~~~i~~FLk~ 282 (283)
T d2rhwa1 211 STWDVTARLGEI-KAKTFITWGRDDRFVPLDHGLKLLWNIDDARLHVFSKCGHWAQWEH-ADEFNRLVIDFLRH 282 (283)
T ss_dssp GGGCCGGGGGGC-CSCEEEEEETTCSSSCTHHHHHHHHHSSSEEEEEESSCCSCHHHHT-HHHHHHHHHHHHHH
T ss_pred cccchHHHHhhC-CCCEEEEEeCCCCCcCHHHHHHHHHhCCCCEEEEECCCCCchHHhC-HHHHHHHHHHHHhC
Confidence 133455678889 5999999999999999999999999999999999999999999997 99999999999975
|
| >d1a8qa_ c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A1 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=100.00 E-value=2.4e-39 Score=254.16 Aligned_cols=268 Identities=21% Similarity=0.273 Sum_probs=168.7
Q ss_pred eeEeCCCceEEEEeCCCCCCCcEEEeccCCCCCCC-CCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHH
Q 020064 26 ILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTT-PSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIE 104 (331)
Q Consensus 26 ~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~~-~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~ 104 (331)
++++.||.+++|.+.| ++|+|||+||++++... ...+..+.++||+|+++|+||||.|+.+. ..++..++++|+.
T Consensus 2 ~~~t~dG~~l~y~~~G--~g~~ivlvHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~--~~~~~~~~~~dl~ 77 (274)
T d1a8qa_ 2 ICTTRDGVEIFYKDWG--QGRPVVFIHGWPLNGDAWQDQLKAVVDAGYRGIAHDRRGHGHSTPVW--DGYDFDTFADDLN 77 (274)
T ss_dssp EEECTTSCEEEEEEEC--SSSEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCS--SCCSHHHHHHHHH
T ss_pred eEECcCCCEEEEEEEC--CCCeEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEeCCCCccccccc--ccccchhhHHHHH
Confidence 6889999999999999 68999999998766544 45666677789999999999999998766 4678999999999
Q ss_pred HHHHHhCCCcEEEEEeChhHHHHHHHHHh-CCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhh
Q 020064 105 KLRQHLEIPEWQVFGGSWGSTLALAYSLA-HPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERS 183 (331)
Q Consensus 105 ~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~-~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (331)
++++.++.++++++||||||.+++.+++. .|+++++++++++............ .......+..+..... ....
T Consensus 78 ~~l~~l~~~~~~lvGhS~Gg~~~~~~~a~~~p~~v~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~-~~~~ 152 (274)
T d1a8qa_ 78 DLLTDLDLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDKNP----DGVPDEVFDALKNGVL-TERS 152 (274)
T ss_dssp HHHHHTTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCT----TSBCHHHHHHHHHHHH-HHHH
T ss_pred HHHHHhhhhhhcccccccccchHHHHHHHhhhccceeEEEEeccCccchhhhhcc----chhhHHHHHHHHhhhh-hhhH
Confidence 99999999999999999999998887665 5899999999987543221100000 0000000000000000 0000
Q ss_pred hhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHH-HHhhhhhhhhhccCCCCCcchhhhhcc
Q 020064 184 CFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSL-AFARIENHYFLNKGFFPSDSFLLDNID 262 (331)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~ 262 (331)
.........+. ........ ........+.. ................ ...+..+.+.
T Consensus 153 ~~~~~~~~~~~---------------------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~ 209 (274)
T d1a8qa_ 153 QFWKDTAEGFF---------------------SANRPGNK-VTQGNKDAFWYMAMAQTIEGGVRCVDAF-GYTDFTEDLK 209 (274)
T ss_dssp HHHHHHHHHHT---------------------TTTSTTCC-CCHHHHHHHHHHHTTSCHHHHHHHHHHH-HHCCCHHHHT
T ss_pred HHhhhhhhhhh---------------------hccccchh-hhhhHHHHHHHhhhccchhhhhhHHHHh-hccchHHHHH
Confidence 00000000000 00000000 00000000000 0000000000000000 0223455788
Q ss_pred ccccccEEEEecCCCCccCCcc-hHHHHHhCCCCcEEEecCCCCCCCcC-CchhHHHHHHHHHHHh
Q 020064 263 NIRHINATIVQGRYDVCCPMMS-AWDLHKAWPEADFKVVADAGHSANEP-GIAAELVATNEKLKNL 326 (331)
Q Consensus 263 ~i~~~P~l~i~G~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~gH~~~~~-~~~~~~~~~i~~fl~~ 326 (331)
++ ++|+|+|+|++|.++|.+. .+.+.+.+|++++++++++||+++.+ ..++++.+.|.+||++
T Consensus 210 ~i-~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~~~~~p~~~~~~i~~FL~k 274 (274)
T d1a8qa_ 210 KF-DIPTLVVHGDDDQVVPIDATGRKSAQIIPNAELKVYEGSSHGIAMVPGDKEKFNRDLLEFLNK 274 (274)
T ss_dssp TC-CSCEEEEEETTCSSSCGGGTHHHHHHHSTTCEEEEETTCCTTTTTSTTHHHHHHHHHHHHHTC
T ss_pred hc-cceeeeeccCCCCCcCHHHHHHHHHHhCCCCEEEEECCCCCcccccccCHHHHHHHHHHHHCc
Confidence 89 5999999999999999765 46777888999999999999998652 3499999999999975
|
| >d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A2 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=100.00 E-value=6.1e-39 Score=252.22 Aligned_cols=262 Identities=19% Similarity=0.211 Sum_probs=164.5
Q ss_pred CceEEEEeCCCCCCCcEEEeccCCCCCCC-CCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHh
Q 020064 32 IHTIYWEQSGNPTGHPVVFLHGGPGGGTT-PSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHL 110 (331)
Q Consensus 32 g~~l~~~~~g~~~~~~vl~~HG~~~~~~~-~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (331)
+.+|+|...| ++|+|||+||++++... ...+..+.++||+|+++|+||||.|+... ..++++++++|+.++++.+
T Consensus 12 ~v~i~y~~~G--~G~~ivllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~--~~~~~~~~~~dl~~~l~~l 87 (277)
T d1brta_ 12 SIDLYYEDHG--TGQPVVLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGFGQSSQPT--TGYDYDTFAADLNTVLETL 87 (277)
T ss_dssp EEEEEEEEEC--SSSEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCS--SCCSHHHHHHHHHHHHHHH
T ss_pred cEEEEEEEEc--cCCeEEEECCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCCCcccccc--cccchhhhhhhhhhhhhcc
Confidence 3578999999 68999999998776554 45566777789999999999999998665 4689999999999999999
Q ss_pred CCCcEEEEEeChhH-HHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhh
Q 020064 111 EIPEWQVFGGSWGS-TLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAY 189 (331)
Q Consensus 111 ~~~~v~lvG~S~Gg-~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (331)
+.++++++|||||| .++..++..+|++|+++|++++............ ........+.....
T Consensus 88 ~~~~~~lvGhS~G~~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-------------- 150 (277)
T d1brta_ 88 DLQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNP---DGAAPQEFFDGIVA-------------- 150 (277)
T ss_dssp TCCSEEEEEEGGGHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBT---TCSBCHHHHHHHHH--------------
T ss_pred CcccccccccccchhhhhHHHHHhhhcccceEEEecCCCcccccchhhh---hhhhhhhHHHHHHH--------------
Confidence 99999999999996 5566677888999999999987553221100000 00000000000000
Q ss_pred ccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhh-hhhhhhhccCCCCCcchhhhhcccccccc
Q 020064 190 SKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFAR-IENHYFLNKGFFPSDSFLLDNIDNIRHIN 268 (331)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~i~~~P 268 (331)
................+......... ........ ..+...... ........... ..+....+.++ ++|
T Consensus 151 --~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~i-~~P 219 (277)
T d1brta_ 151 --AVKADRYAFYTGFFNDFYNLDENLGT-RISEEAVR----NSWNTAASGGFFAAAAAPTTW---YTDFRADIPRI-DVP 219 (277)
T ss_dssp --HHHHCHHHHHHHHHHHHTTHHHHBTT-TBCHHHHH----HHHHHHHHSCHHHHHHGGGGT---TCCCTTTGGGC-CSC
T ss_pred --hhhccchhhhhhccccccccchhhhh-hhhHHHhh----hhhcccchhhhhhhhhhhhhh---hhhHHHHHHhc-Ccc
Confidence 00000000000000000000000000 00000000 000000000 00000000000 22345678889 599
Q ss_pred EEEEecCCCCccCCcc-hHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHh
Q 020064 269 ATIVQGRYDVCCPMMS-AWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNL 326 (331)
Q Consensus 269 ~l~i~G~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 326 (331)
+++++|++|.+++++. .+.+.+.+|++++++++++||+++.++ |+++.+.|.+||++
T Consensus 220 ~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~-p~~~~~~i~~fL~k 277 (277)
T d1brta_ 220 ALILHGTGDRTLPIENTARVFHKALPSAEYVEVEGAPHGLLWTH-AEEVNTALLAFLAK 277 (277)
T ss_dssp EEEEEETTCSSSCGGGTHHHHHHHCTTSEEEEETTCCTTHHHHT-HHHHHHHHHHHHHC
T ss_pred ceeEeecCCCCcCHHHHHHHHHHhCCCCEEEEECCCCCchHHhC-HHHHHHHHHHHHCc
Confidence 9999999999998765 566778889999999999999999997 99999999999975
|
| >d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium radiobacter [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Agrobacterium radiobacter [TaxId: 358]
Probab=100.00 E-value=3.6e-38 Score=249.84 Aligned_cols=272 Identities=16% Similarity=0.155 Sum_probs=168.6
Q ss_pred CCCccceeEeCCCceEEEEeCCCCCCCcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCC--CCccchH
Q 020064 20 EPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHAC--LDQNTTW 97 (331)
Q Consensus 20 ~~~~~~~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~--~~~~~~~ 97 (331)
..++..+++++|. +++|...| ++|+|||+||++++...|......+.++|+|+++|+||||.|..... ...++.+
T Consensus 6 ~~~~~~~~~~~~~-~l~y~~~G--~gp~vv~lHG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~ 82 (293)
T d1ehya_ 6 EDFKHYEVQLPDV-KIHYVREG--AGPTLLLLHGWPGFWWEWSKVIGPLAEHYDVIVPDLRGFGDSEKPDLNDLSKYSLD 82 (293)
T ss_dssp GGSCEEEEECSSC-EEEEEEEE--CSSEEEEECCSSCCGGGGHHHHHHHHTTSEEEEECCTTSTTSCCCCTTCGGGGCHH
T ss_pred CCCcceEEEECCE-EEEEEEEC--CCCeEEEECCCCCCHHHHHHHHHHHhcCCEEEEecCCcccCCccccccccccccch
Confidence 4566778888766 99999999 68999999998777655544444446799999999999999985442 2346789
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhc--
Q 020064 98 DLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRD-- 175 (331)
Q Consensus 98 ~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 175 (331)
++++|+.++++.++.++++++||||||.+++.+|.++|+++.++|++++.............. ...........
T Consensus 83 ~~a~~~~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 158 (293)
T d1ehya_ 83 KAADDQAALLDALGIEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPIQPDFGPVYFGLGH----VHESWYSQFHQLD 158 (293)
T ss_dssp HHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHHHHTGGGEEEEEEECCSCTTC---------------CCHHHHHTTCH
T ss_pred hhhhHHHhhhhhcCccccccccccccccchhcccccCccccceeeeeeccCccccchhhhhhh----hhhhhhhhhhccc
Confidence 999999999999999999999999999999999999999999999999865432111100000 00000000000
Q ss_pred ------cCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcC-----CccHHHHHHhhhhhhh
Q 020064 176 ------LIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRG-----EDDIFSLAFARIENHY 244 (331)
Q Consensus 176 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 244 (331)
.............+....... ............ ........+. +
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 213 (293)
T d1ehya_ 159 MAVEVVGSSREVCKKYFKHFFDHWSYR--------------------DELLTEEELEVHVDNCMKPDNIHGGFN-----Y 213 (293)
T ss_dssp HHHHHHTSCHHHHHHHHHHHHHHTSSS--------------------SCCSCHHHHHHHHHHHTSTTHHHHHHH-----H
T ss_pred hhhhhhccchhHHHHHHHHhhhhcccc--------------------cccccHHHHHhhhhccccchhhhhhhh-----h
Confidence 000000000011111100000 000011110000 0000000000 0
Q ss_pred hhccCCCCCcchhhhhccccccccEEEEecCCCCccCCcchH-HHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHH
Q 020064 245 FLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAW-DLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKL 323 (331)
Q Consensus 245 ~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~-~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~f 323 (331)
+..................+ ++|+++|+|++|.++|.+... .+.+..|++++++++++||+++.|+ |+++++.|.+|
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~-~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~-Pe~~~~~I~~F 291 (293)
T d1ehya_ 214 YRANIRPDAALWTDLDHTMS-DLPVTMIWGLGDTCVPYAPLIEFVPKYYSNYTMETIEDCGHFLMVEK-PEIAIDRIKTA 291 (293)
T ss_dssp HHHHSSSSCCCCCTGGGSCB-CSCEEEEEECCSSCCTTHHHHHHHHHHBSSEEEEEETTCCSCHHHHC-HHHHHHHHHHH
T ss_pred hhhccccchhhhhhhhhhcc-CCceEEEEeCCCCCcCHHHHHHHHHHhCCCCEEEEECCCCCchHHHC-HHHHHHHHHHh
Confidence 00000000000111133456 699999999999999987654 5666779999999999999999997 99999999999
Q ss_pred HH
Q 020064 324 KN 325 (331)
Q Consensus 324 l~ 325 (331)
++
T Consensus 292 fr 293 (293)
T d1ehya_ 292 FR 293 (293)
T ss_dssp CC
T ss_pred hC
Confidence 74
|
| >d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Xanthobacter autotrophicus [TaxId: 280]
Probab=100.00 E-value=7.7e-38 Score=250.04 Aligned_cols=283 Identities=17% Similarity=0.117 Sum_probs=174.8
Q ss_pred CCccceeE---eCCCceEEEEeCCCCCC-CcEEEeccCCCCCC-CCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccc
Q 020064 21 PYSTGILK---VSDIHTIYWEQSGNPTG-HPVVFLHGGPGGGT-TPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNT 95 (331)
Q Consensus 21 ~~~~~~~~---~~~g~~l~~~~~g~~~~-~~vl~~HG~~~~~~-~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~ 95 (331)
+++.+++. ..+|.+++|.+.|++++ |+|||+||++++.. |...+..+++.||+|+++|+||||.|..+.....++
T Consensus 19 p~~~~~~~~~~~~~g~~~~y~~~G~~~~~p~llllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~ 98 (310)
T d1b6ga_ 19 PFSPNYLDDLPGYPGLRAHYLDEGNSDAEDVFLCLHGEPTWSYLYRKMIPVFAESGARVIAPDFFGFGKSDKPVDEEDYT 98 (310)
T ss_dssp CCCCEEEESCTTCTTCEEEEEEEECTTCSCEEEECCCTTCCGGGGTTTHHHHHHTTCEEEEECCTTSTTSCEESCGGGCC
T ss_pred CCCCceeccccCCCCEEEEEEEecCCCCCCEEEEECCCCCchHHHHHHHHHhhccCceEEEeeecCcccccccccccccc
Confidence 45556665 34788999999998665 56788999877655 455666777789999999999999999765546689
Q ss_pred hHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhh-hHhhc-ccccCChhhHHhh
Q 020064 96 TWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEID-WFYEG-GAAAIYPDAWESF 173 (331)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~ 173 (331)
++++++|+.+++++++.++++|+||||||.+++.+|.++|++|+++|++++......... .+... .........+...
T Consensus 99 ~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~A~~~P~~V~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (310)
T d1b6ga_ 99 FEFHRNFLLALIERLDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNACLMTDPVTQPAFSAFVTQPADGFTAWKYD 178 (310)
T ss_dssp HHHHHHHHHHHHHHHTCCSEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCCCCCCTTTCTHHHHTTTSSTTTHHHHHHH
T ss_pred ccccccchhhhhhhccccccccccceecccccccchhhhccccceEEEEcCccCCCcccchhHHHHhhcchhhhhhhhhh
Confidence 999999999999999999999999999999999999999999999999988654321111 00000 0000000000000
Q ss_pred hccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCC
Q 020064 174 RDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPS 253 (331)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (331)
...........+.......+. .... ...... ..... .......+........... ....
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~---~~~~----------~~~~~~-~~~~~------~~~~~~~~~~~~~~~~~~~-~~~~ 237 (310)
T d1b6ga_ 179 LVTPSDLRLDQFMKRWAPTLT---EAEA----------SAYAAP-FPDTS------YQAGVRKFPKMVAQRDQAC-IDIS 237 (310)
T ss_dssp HHSCSSCCHHHHHHHHSTTCC---HHHH----------HHHHTT-CSSGG------GCHHHHHHHHHHHSCCHHH-HHHH
T ss_pred hccchhhhhhhhhhccCcccc---HHHH----------HHHHhh-cchhh------hhhcchhhhhhhhhhhhhh-hhhh
Confidence 000000000011111100000 0000 000000 00000 0000000000000000000 0000
Q ss_pred cchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCCCC-cEEEecCCCCCCCcCCchhHHHHHHHHHHHh
Q 020064 254 DSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEA-DFKVVADAGHSANEPGIAAELVATNEKLKNL 326 (331)
Q Consensus 254 ~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 326 (331)
.......+.++ ++|+++++|++|.+++++..+.+.+.+++. ++++++++||+++.++ |+.+.+.|.+||++
T Consensus 238 ~~~~~~~~~~~-~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~-pe~v~~~i~~Fl~~ 309 (310)
T d1b6ga_ 238 TEAISFWQNDW-NGQTFMAIGMKDKLLGPDVMYPMKALINGCPEPLEIADAGHFVQEFG-EQVAREALKHFAET 309 (310)
T ss_dssp HHHHHHHHHTC-CSEEEEEEETTCSSSSHHHHHHHHHHSTTCCCCEEETTCCSCGGGGH-HHHHHHHHHHHHHT
T ss_pred hhhhHHhhccc-CCCeEEEEeCCCCCCCHHHHHHHHHhcCCCccEEEECCCcCchhhhC-HHHHHHHHHHHHhC
Confidence 11122234567 699999999999999999999999999875 7899999999998776 99999999999975
|
| >d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase F species: Pseudomonas fluorescens [TaxId: 294]
Probab=100.00 E-value=8.4e-38 Score=245.15 Aligned_cols=268 Identities=18% Similarity=0.225 Sum_probs=167.4
Q ss_pred eeEeCCCceEEEEeCCCCCCCcEEEeccCCCCCC-CCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHH
Q 020064 26 ILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGT-TPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIE 104 (331)
Q Consensus 26 ~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~-~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~ 104 (331)
++.+.||.+++|...| ++|+|||+||++++.. |...+..+.++||+|+++|+||||.|+.+. ..++.+++++|+.
T Consensus 2 ~f~~~dG~~i~y~~~G--~g~pvvllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~--~~~~~~~~~~~~~ 77 (273)
T d1a8sa_ 2 TFTTRDGTQIYYKDWG--SGQPIVFSHGWPLNADSWESQMIFLAAQGYRVIAHDRRGHGRSSQPW--SGNDMDTYADDLA 77 (273)
T ss_dssp EEECTTSCEEEEEEES--CSSEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCS--SCCSHHHHHHHHH
T ss_pred EEEeeCCcEEEEEEEC--CCCeEEEECCCCCCHHHHHHHHHHHHhCCCEEEEEechhcCcccccc--ccccccchHHHHH
Confidence 5788899999999999 6899999999777655 445566677789999999999999998765 4689999999999
Q ss_pred HHHHHhCCCcEEEEEeChhHHHHHH-HHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhh
Q 020064 105 KLRQHLEIPEWQVFGGSWGSTLALA-YSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERS 183 (331)
Q Consensus 105 ~~~~~~~~~~v~lvG~S~Gg~~a~~-~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (331)
++++.++.++.+++|||+||.++.. ++..+|+++.+++++++.+......... ........+........ ....
T Consensus 78 ~~l~~l~~~~~~lvg~s~gG~~~~~~~a~~~p~~v~~~~l~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~-~~~~ 152 (273)
T d1a8sa_ 78 QLIEHLDLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEAN----PGGLPMEVFDGIRQASL-ADRS 152 (273)
T ss_dssp HHHHHTTCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSC----TTSBCHHHHHHHHHHHH-HHHH
T ss_pred HHHHhcCccceeeeeeccCCccchhhhhhhhhhccceeEEEecccccccccccc----cccchhhhhhhHHHHHH-HHHH
Confidence 9999999999999999998865555 5566799999999998755321110000 00000000000000000 0000
Q ss_pred hhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccc
Q 020064 184 CFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDN 263 (331)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 263 (331)
.....+....... ............... .............+....... ..+..+.+.+
T Consensus 153 ~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 211 (273)
T d1a8sa_ 153 QLYKDLASGPFFG----------------FNQPGAKSSAGMVDW----FWLQGMAAGHKNAYDCIKAFS-ETDFTEDLKK 211 (273)
T ss_dssp HHHHHHHHTTSSS----------------TTSTTCCCCHHHHHH----HHHHHHHSCHHHHHHHHHHHH-HCCCHHHHHT
T ss_pred HHHHHHhhhhhhh----------------cccchhhhhHHHHHH----HHHhhcccchhhhhhhHHHhh-hhhhhHHHHh
Confidence 0000000000000 000000000000000 000000000000000000000 2334567888
Q ss_pred cccccEEEEecCCCCccCCcchHHHHHh-CCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHH
Q 020064 264 IRHINATIVQGRYDVCCPMMSAWDLHKA-WPEADFKVVADAGHSANEPGIAAELVATNEKLKN 325 (331)
Q Consensus 264 i~~~P~l~i~G~~D~~~~~~~~~~~~~~-~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~ 325 (331)
+ ++|+++|+|++|.++|.+..+.+.+. .++++++++|++||+++.++ |+++++.|.+||+
T Consensus 212 i-~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~-p~~~~~~i~~Fl~ 272 (273)
T d1a8sa_ 212 I-DVPTLVVHGDADQVVPIEASGIASAALVKGSTLKIYSGAPHGLTDTH-KDQLNADLLAFIK 272 (273)
T ss_dssp C-CSCEEEEEETTCSSSCSTTTHHHHHHHSTTCEEEEETTCCSCHHHHT-HHHHHHHHHHHHH
T ss_pred h-ccceEEEecCCCCCCCHHHHHHHHHHhCCCCEEEEECCCCCchHHhC-HHHHHHHHHHHcC
Confidence 9 59999999999999998877777644 58999999999999999997 9999999999996
|
| >d1imja_ c.69.1.23 (A:) Ccg1/TafII250-interacting factor B (Cib) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Ccg1/TafII250-interacting factor B (Cib) domain: Ccg1/TafII250-interacting factor B (Cib) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-38 Score=238.43 Aligned_cols=198 Identities=18% Similarity=0.159 Sum_probs=159.4
Q ss_pred CCccceeEeCCCceEEEEeCCC---CCCCcEEEeccCCCCCCCCC---cccccCCCCcEEEEecCCCCCCCCCCCCCCcc
Q 020064 21 PYSTGILKVSDIHTIYWEQSGN---PTGHPVVFLHGGPGGGTTPS---NRRFFDPDFYRIILFDQRGAGKSTPHACLDQN 94 (331)
Q Consensus 21 ~~~~~~~~~~~g~~l~~~~~g~---~~~~~vl~~HG~~~~~~~~~---~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~ 94 (331)
..++.++++ +|.+++|+..++ +++++|||+||++++...|. .+..+.++||+|+++|+||||.|........+
T Consensus 5 ~~~e~~i~v-~G~~i~y~~~~~~~~~~~~~vvllHG~~~~~~~w~~~~~~~~la~~gy~via~D~~G~G~S~~~~~~~~~ 83 (208)
T d1imja_ 5 EQREGTIQV-QGQALFFREALPGSGQARFSVLLLHGIRFSSETWQNLGTLHRLAQAGYRAVAIDLPGLGHSKEAAAPAPI 83 (208)
T ss_dssp EECCCCEEE-TTEEECEEEEECSSSCCSCEEEECCCTTCCHHHHHHHTHHHHHHHTTCEEEEECCTTSGGGTTSCCSSCT
T ss_pred CceEEEEEE-CCEEEEEEEecCCCCCCCCeEEEECCCCCChhHHhhhHHHHHHHHcCCeEEEeecccccCCCCCCccccc
Confidence 345677877 566999987764 34568999999877654433 34667789999999999999999876544455
Q ss_pred chHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhh
Q 020064 95 TTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFR 174 (331)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (331)
+..+.++++.++++.++.++++|+||||||.+++.+|.++|++++++|+++|.....
T Consensus 84 ~~~~~~~~l~~~~~~l~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lV~~~p~~~~~----------------------- 140 (208)
T d1imja_ 84 GELAPGSFLAAVVDALELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTDK----------------------- 140 (208)
T ss_dssp TSCCCTHHHHHHHHHHTCCSCEEEEEGGGHHHHHHHHTSTTCCCSEEEEESCSCGGG-----------------------
T ss_pred chhhhhhhhhhcccccccccccccccCcHHHHHHHHHHHhhhhcceeeecCcccccc-----------------------
Confidence 666677888999999999999999999999999999999999999999998743210
Q ss_pred ccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCc
Q 020064 175 DLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSD 254 (331)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (331)
T Consensus 141 -------------------------------------------------------------------------------- 140 (208)
T d1imja_ 141 -------------------------------------------------------------------------------- 140 (208)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred chhhhhccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhh
Q 020064 255 SFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNLI 327 (331)
Q Consensus 255 ~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 327 (331)
...+.+.++ ++|+|+|+|++|.++|.+ .+..+.+|++++.+++++||..+.++ |+++.+.+.+||+.+
T Consensus 141 -~~~~~~~~i-~~P~Lii~G~~D~~~~~~--~~~~~~~~~~~~~~i~~~gH~~~~~~-p~~~~~~l~~Fl~~L 208 (208)
T d1imja_ 141 -INAANYASV-KTPALIVYGDQDPMGQTS--FEHLKQLPNHRVLIMKGAGHPCYLDK-PEEWHTGLLDFLQGL 208 (208)
T ss_dssp -SCHHHHHTC-CSCEEEEEETTCHHHHHH--HHHHTTSSSEEEEEETTCCTTHHHHC-HHHHHHHHHHHHHTC
T ss_pred -ccccccccc-ccccccccCCcCcCCcHH--HHHHHhCCCCeEEEECCCCCchhhhC-HHHHHHHHHHHHhcC
Confidence 011234566 599999999999998754 34556789999999999999998887 999999999999864
|
| >d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId: 51671]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Gamma-lactamase species: Aureobacterium sp. [TaxId: 51671]
Probab=100.00 E-value=2.3e-37 Score=243.49 Aligned_cols=263 Identities=19% Similarity=0.228 Sum_probs=163.6
Q ss_pred ceEEEEeCCCCCCCcEEEeccCCCCCCC-CCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhC
Q 020064 33 HTIYWEQSGNPTGHPVVFLHGGPGGGTT-PSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLE 111 (331)
Q Consensus 33 ~~l~~~~~g~~~~~~vl~~HG~~~~~~~-~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (331)
.+|+|...| ++|+|||+||++++... ...+..++++||+|+++|+||||.|+.+. ..++++++++|+.+++++++
T Consensus 13 v~i~y~~~G--~g~~illlHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~--~~~~~~~~~~di~~~i~~l~ 88 (279)
T d1hkha_ 13 IELYYEDQG--SGQPVVLIHGYPLDGHSWERQTRELLAQGYRVITYDRRGFGGSSKVN--TGYDYDTFAADLHTVLETLD 88 (279)
T ss_dssp EEEEEEEES--SSEEEEEECCTTCCGGGGHHHHHHHHHTTEEEEEECCTTSTTSCCCS--SCCSHHHHHHHHHHHHHHHT
T ss_pred EEEEEEEEc--cCCeEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEechhhCCccccc--cccchhhhhhhhhhhhhhcC
Confidence 388999999 68999999997776554 45566677899999999999999998765 46899999999999999999
Q ss_pred CCcEEEEEeChhH-HHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhc
Q 020064 112 IPEWQVFGGSWGS-TLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYS 190 (331)
Q Consensus 112 ~~~v~lvG~S~Gg-~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (331)
.++++|+|||||| .++..+|..+|+++.++++++++.......... ........+........
T Consensus 89 ~~~~~lvGhS~Gg~~~a~~~a~~~p~~v~~lvli~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~------------ 152 (279)
T d1hkha_ 89 LRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDN----PEGVPQEVFDGIEAAAK------------ 152 (279)
T ss_dssp CCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTB----TTSBCHHHHHHHHHHHH------------
T ss_pred cCccccccccccccchhhhhccccccccceeEEeeccCCccccchhh----hhhhhHHHHHHHHHhhh------------
Confidence 9999999999996 566677778899999999998754432110000 00000000000000000
Q ss_pred cccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhh-hhhhccCCCCCcchhhhhccccccccE
Q 020064 191 KRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIEN-HYFLNKGFFPSDSFLLDNIDNIRHINA 269 (331)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~i~~~P~ 269 (331)
.............+....... ........... .+......... .+.....+.....+..+.+.++ ++|+
T Consensus 153 ----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~ 222 (279)
T d1hkha_ 153 ----GDRFAWFTDFYKNFYNLDENL-GSRISEQAVTG----SWNVAIGSAPVAAYAVVPAWIEDFRSDVEAVRAA-GKPT 222 (279)
T ss_dssp ----HCHHHHHHHHHHHHHTHHHHB-TTTBCHHHHHH----HHHHHHTSCTTHHHHTHHHHTCBCHHHHHHHHHH-CCCE
T ss_pred ----hhhhhhhhhhhhhhcccchhh-hhhhhhhhhhh----hhhhhcccchhhhhhhhhhhhcccccchhhhccc-CCce
Confidence 000000000000000000000 00000000000 00000000000 0000000011112334456777 5999
Q ss_pred EEEecCCCCccCCc-chHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHh
Q 020064 270 TIVQGRYDVCCPMM-SAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNL 326 (331)
Q Consensus 270 l~i~G~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 326 (331)
++++|++|.+++.+ ..+.+.+.+|++++++++++||+++.++ |+++.+.|.+||++
T Consensus 223 l~i~G~~D~~~~~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e~-p~~v~~~i~~fl~k 279 (279)
T d1hkha_ 223 LILHGTKDNILPIDATARRFHQAVPEADYVEVEGAPHGLLWTH-ADEVNAALKTFLAK 279 (279)
T ss_dssp EEEEETTCSSSCTTTTHHHHHHHCTTSEEEEETTCCTTHHHHT-HHHHHHHHHHHHHC
T ss_pred EEEEcCCCCccCHHHHHHHHHHhCCCCEEEEECCCCCchHHhC-HHHHHHHHHHHHCc
Confidence 99999999999865 5678888899999999999999999997 99999999999975
|
| >d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Arylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=100.00 E-value=9.5e-37 Score=238.74 Aligned_cols=267 Identities=20% Similarity=0.222 Sum_probs=167.3
Q ss_pred eeEeCCCceEEEEeCCCCCCCcEEEeccCCCCCCC-CCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHH
Q 020064 26 ILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTT-PSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIE 104 (331)
Q Consensus 26 ~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~~-~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~ 104 (331)
++.+.||.+|+|...| ++|+|||+||++++... ...+..+.++||+|+++|+||||.|+.+. ..++.+++++++.
T Consensus 2 ~f~~~dG~~l~y~~~G--~g~~vv~lHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~--~~~~~~~~~~~~~ 77 (271)
T d1va4a_ 2 TFVAKDGTQIYFKDWG--SGKPVLFSHGWLLDADMWEYQMEYLSSRGYRTIAFDRRGFGRSDQPW--TGNDYDTFADDIA 77 (271)
T ss_dssp EEECTTSCEEEEEEES--SSSEEEEECCTTCCGGGGHHHHHHHHTTTCEEEEECCTTSTTSCCCS--SCCSHHHHHHHHH
T ss_pred EEEeECCeEEEEEEEc--CCCeEEEECCCCCCHHHHHHHHHHHHhCCCEEEEEeccccccccccc--cccccccccccce
Confidence 4556788899999999 68899999998776554 45566676789999999999999998765 4678999999999
Q ss_pred HHHHHhCCCcEEEEEeChhHHHHH-HHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhh
Q 020064 105 KLRQHLEIPEWQVFGGSWGSTLAL-AYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERS 183 (331)
Q Consensus 105 ~~~~~~~~~~v~lvG~S~Gg~~a~-~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (331)
++++.++.++++++|||+||.++. .+|..+|+++.+++++++............. ......+..+..
T Consensus 78 ~~~~~~~~~~~~~vg~s~gG~~~~~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~-------- 145 (271)
T d1va4a_ 78 QLIEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQ----GVPLDVFARFKT-------- 145 (271)
T ss_dssp HHHHHHTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTT----SBCHHHHHHHHH--------
T ss_pred eeeeecCCCcceeeccccccccccccccccccceeeEEEeecccccccccchhhhh----hhhhhHHHHHHH--------
Confidence 999999999999999999887654 5667789999999999876543211100000 000000000000
Q ss_pred hhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccc
Q 020064 184 CFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDN 263 (331)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 263 (331)
.... ........+..................... ................... ...+....+.+
T Consensus 146 ----~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~ 209 (271)
T d1va4a_ 146 ----ELLK--------DRAQFISDFNAPFYGINKGQVVSQGVQTQT---LQIALLASLKATVDCVTAF-AETDFRPDMAK 209 (271)
T ss_dssp ----HHHH--------HHHHHHHHHHHHHHTGGGTCCCCHHHHHHH---HHHHHHSCHHHHHHHHHHH-HHCCCHHHHHH
T ss_pred ----Hhhh--------hhhhhhhhhcchhhcccchhhhhhhHHHHH---Hhhhhhhhhhhhhhccccc-chhhhhhhhhh
Confidence 0000 000000000000000000000000000000 0000000000000000000 02234557788
Q ss_pred cccccEEEEecCCCCccCCcchHHHH-HhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHh
Q 020064 264 IRHINATIVQGRYDVCCPMMSAWDLH-KAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNL 326 (331)
Q Consensus 264 i~~~P~l~i~G~~D~~~~~~~~~~~~-~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 326 (331)
+ ++|+++++|++|.++|++...++. +.++++++++++++||+++.++ |+++.+.|.+||++
T Consensus 210 i-~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~-p~~~~~~i~~fL~k 271 (271)
T d1va4a_ 210 I-DVPTLVIHGDGDQIVPFETTGKVAAELIKGAELKVYKDAPHGFAVTH-AQQLNEDLLAFLKR 271 (271)
T ss_dssp C-CSCEEEEEETTCSSSCGGGTHHHHHHHSTTCEEEEETTCCTTHHHHT-HHHHHHHHHHHHTC
T ss_pred c-ccceeecccCCCCCCCHHHHHHHHHHhCCCCEEEEECCCCCchHHhC-HHHHHHHHHHHHCc
Confidence 8 599999999999999988876664 5669999999999999999997 99999999999975
|
| >d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Biotin biosynthesis protein BioH domain: Biotin biosynthesis protein BioH species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.2e-36 Score=236.44 Aligned_cols=253 Identities=20% Similarity=0.221 Sum_probs=155.0
Q ss_pred EEEEeCCCCCCCcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCc
Q 020064 35 IYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPE 114 (331)
Q Consensus 35 l~~~~~g~~~~~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (331)
|+|...|. .+++|||+||++++...|......++++|+|+++|+||||.|+... ..+..+ +.+.+..+..++
T Consensus 2 i~y~~~G~-g~~~lvllHG~~~~~~~~~~~~~~L~~~~~vi~~D~~G~G~S~~~~---~~~~~d----~~~~~~~~~~~~ 73 (256)
T d1m33a_ 2 IWWQTKGQ-GNVHLVLLHGWGLNAEVWRCIDEELSSHFTLHLVDLPGFGRSRGFG---ALSLAD----MAEAVLQQAPDK 73 (256)
T ss_dssp CCEEEECC-CSSEEEEECCTTCCGGGGGGTHHHHHTTSEEEEECCTTSTTCCSCC---CCCHHH----HHHHHHTTSCSS
T ss_pred eEEEEECC-CCCeEEEECCCCCCHHHHHHHHHHHhCCCEEEEEeCCCCCCccccc---cccccc----cccccccccccc
Confidence 68889895 3478999999877655554444444679999999999999998654 344443 334445566789
Q ss_pred EEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhccccC
Q 020064 115 WQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLN 194 (331)
Q Consensus 115 v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (331)
++++||||||.+++.+|.++|+++++++++++.+....... ...........+...+.... ......+.....
T Consensus 74 ~~l~GhS~Gg~ia~~~a~~~p~~~~~l~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 146 (256)
T d1m33a_ 74 AIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARDE------WPGIKPDVLAGFQQQLSDDQ-QRTVERFLALQT 146 (256)
T ss_dssp EEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBCBTT------BCSBCHHHHHHHHHHHHHHH-HHHHHHHHHTTS
T ss_pred eeeeecccchHHHHHHHHhCCcccceeeeeecccccccchh------hhhhHHHHHHHHHhhhhhhh-HHHHHHHhhhhh
Confidence 99999999999999999999999999999986543211100 00001111111111110000 011111111100
Q ss_pred CCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEec
Q 020064 195 SDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQG 274 (331)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G 274 (331)
..... .......... ............ +...+.... ..+..+.+.++ ++|+++|+|
T Consensus 147 ~~~~~-~~~~~~~~~~--~~~~~~~~~~~~--------~~~~~~~~~------------~~~~~~~l~~i-~~P~lii~G 202 (256)
T d1m33a_ 147 MGTET-ARQDARALKK--TVLALPMPEVDV--------LNGGLEILK------------TVDLRQPLQNV-SMPFLRLYG 202 (256)
T ss_dssp TTSTT-HHHHHHHHHH--HHHTSCCCCHHH--------HHHHHHHHH------------HCCCTTGGGGC-CSCEEEEEE
T ss_pred ccccc-hhhHHHHHHH--hhhhcchhhHHH--------HHhhhhhhc------------ccchHHHHHhc-cCCcccccc
Confidence 00000 0000000000 000000000000 000010000 22345677889 599999999
Q ss_pred CCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhh
Q 020064 275 RYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNLI 327 (331)
Q Consensus 275 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 327 (331)
++|.++|++.++.+.+.+|++++++++++||+++.|+ |+++++.|.+|++++
T Consensus 203 ~~D~~~p~~~~~~l~~~~~~~~~~~i~~~gH~~~~e~-p~~~~~~l~~fl~~i 254 (256)
T d1m33a_ 203 YLDGLVPRKVVPMLDKLWPHSESYIFAKAAHAPFISH-PAEFCHLLVALKQRV 254 (256)
T ss_dssp TTCSSSCGGGCC-CTTTCTTCEEEEETTCCSCHHHHS-HHHHHHHHHHHHTTS
T ss_pred ccCCCCCHHHHHHHHHHCCCCEEEEECCCCCchHHHC-HHHHHHHHHHHHHHc
Confidence 9999999999999999999999999999999999997 999999999999886
|
| >d1mj5a_ c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]
Probab=100.00 E-value=2e-34 Score=228.36 Aligned_cols=277 Identities=16% Similarity=0.186 Sum_probs=162.7
Q ss_pred ccceeEeCCCceEEEEeCCCCCCCcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCC--CccchHHHH
Q 020064 23 STGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACL--DQNTTWDLI 100 (331)
Q Consensus 23 ~~~~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~--~~~~~~~~~ 100 (331)
+.+++++ +|.+++|.+.| ++|+|||+||++++...|..+...++++|+||++|+||||.|+..... ......+..
T Consensus 9 ~~~fi~~-~g~~i~y~~~G--~g~~vvllHG~~~~~~~~~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~ 85 (298)
T d1mj5a_ 9 EKKFIEI-KGRRMAYIDEG--TGDPILFQHGNPTSSYLWRNIMPHCAGLGRLIACDLIGMGDSDKLDPSGPERYAYAEHR 85 (298)
T ss_dssp CCEEEEE-TTEEEEEEEES--CSSEEEEECCTTCCGGGGTTTGGGGTTSSEEEEECCTTSTTSCCCSSCSTTSSCHHHHH
T ss_pred CCEEEEE-CCEEEEEEEEc--CCCcEEEECCCCCCHHHHHHHHHHHhcCCEEEEEeCCCCCCCCCCccccccccccchhh
Confidence 3567888 56699999999 689999999988776655555455578899999999999999865432 223445555
Q ss_pred HHHHHHH-HHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCc
Q 020064 101 DDIEKLR-QHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPE 179 (331)
Q Consensus 101 ~~~~~~~-~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (331)
+++..++ +..+.++++++||||||.+++.++.++|++|.+++++++............. ..............
T Consensus 86 ~~~~~~~~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 159 (298)
T d1mj5a_ 86 DYLDALWEALDLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPIEWADFPEQ------DRDLFQAFRSQAGE 159 (298)
T ss_dssp HHHHHHHHHTTCTTCEEEEEEHHHHHHHHHHHHHTGGGEEEEEEEEECCSCBCGGGSCGG------GHHHHHHHHSTTHH
T ss_pred hhhccccccccccccCeEEEecccchhHHHHHHHHHhhhheeeccccccccccchhhhhh------hhhhhhhhhhhhhh
Confidence 5555544 4556789999999999999999999999999999999876543221110000 00000000000000
Q ss_pred c---hhhhhHHhhccccC-CC-chHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhc--cCCCC
Q 020064 180 N---ERSCFVDAYSKRLN-SD-DKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLN--KGFFP 252 (331)
Q Consensus 180 ~---~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 252 (331)
. .............. .. ...........+ .... ................. .....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~ 221 (298)
T d1mj5a_ 160 ELVLQDNVFVEQVLPGLILRPLSEAEMAAYREPF----------LAAG--------EARRPTLSWPRQIPIAGTPADVVA 221 (298)
T ss_dssp HHHTTTCHHHHTHHHHTSSSCCCHHHHHHHHGGG----------CSSS--------GGGHHHHHTGGGSCBTTBSHHHHH
T ss_pred hhhhhhhhhhhhhccccccccchhhhhhhhhhhh----------ccch--------hhhhhhhhhhhhhhhcchhhhhhh
Confidence 0 00000000000000 00 000000000000 0000 00000000000000000 00000
Q ss_pred CcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhhhcC
Q 020064 253 SDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNLIKNG 330 (331)
Q Consensus 253 ~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~~~ 330 (331)
...+....+..+ ++|+++++|++|.+.+ ...+.+.+.+|+.+++++ ++||+++.|+ |+++++.|.+||+++.+.
T Consensus 222 ~~~~~~~~~~~~-~~P~l~i~g~~d~~~~-~~~~~~~~~~p~~~~~~~-~~GH~~~~e~-P~~v~~~i~~fl~~~~~a 295 (298)
T d1mj5a_ 222 IARDYAGWLSES-PIPKLFINAEPGALTT-GRMRDFCRTWPNQTEITV-AGAHFIQEDS-PDEIGAAIAAFVRRLRPA 295 (298)
T ss_dssp HHHHHHHHHTTC-CSCEEEEEEEECSSSS-HHHHHHHTTCSSEEEEEE-EESSCGGGTC-HHHHHHHHHHHHHHHSCC
T ss_pred hhhhhhhhhhhc-ceeEEEEecCCCCcCh-HHHHHHHHHCCCCEEEEe-CCCCchHHhC-HHHHHHHHHHHHhhhccc
Confidence 012334467778 5999999999998765 567788888898887776 4799999997 999999999999998653
|
| >d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2) {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Salicylic acid-binding protein 2 (SABP2) species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=100.00 E-value=5.3e-35 Score=226.67 Aligned_cols=251 Identities=12% Similarity=0.044 Sum_probs=156.0
Q ss_pred CCCcEEEeccCCCCCC-CCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCC-CcEEEEEeC
Q 020064 44 TGHPVVFLHGGPGGGT-TPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEI-PEWQVFGGS 121 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~-~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~lvG~S 121 (331)
.|++|||+||++++.. |..++..+.++||+|+++|+||||.|+.+.. ..++.++++.|+..+++.... ++++++|||
T Consensus 1 eG~~vvllHG~~~~~~~w~~~~~~L~~~g~~vi~~Dl~G~G~S~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~lvghS 79 (258)
T d1xkla_ 1 EGKHFVLVHGACHGGWSWYKLKPLLEAAGHKVTALDLAASGTDLRKIE-ELRTLYDYTLPLMELMESLSADEKVILVGHS 79 (258)
T ss_dssp CCCEEEEECCTTCCGGGGTTHHHHHHHTTCEEEECCCTTSTTCCCCGG-GCCSHHHHHHHHHHHHHTSCSSSCEEEEEET
T ss_pred CCCcEEEECCCCCCHHHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCC-CCcchHHHHHHHhhhhhcccccccccccccc
Confidence 3789999999766644 5566777767899999999999999986543 357889999999999988765 589999999
Q ss_pred hhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhh----hhHHhhccccCCCc
Q 020064 122 WGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERS----CFVDAYSKRLNSDD 197 (331)
Q Consensus 122 ~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 197 (331)
|||.+++.++.++|++++++|++++.............. .+............. ............ .
T Consensus 80 ~Gg~va~~~a~~~p~~~~~lil~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 150 (258)
T d1xkla_ 80 LGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLE--------QYNERTPAENWLDTQFLPYGSPEEPLTSMFF-G 150 (258)
T ss_dssp THHHHHHHHHHHCGGGEEEEEEESCCCCCSSSCTTHHHH--------HHHHTSCTTTTTTCEEEECSCTTSCCEEEEC-C
T ss_pred hhHHHHHHHhhhhccccceEEEecccCCCcccchHHHHH--------HHhhhhhhhhhhhhhhhhhhhhhhhcccccc-c
Confidence 999999999999999999999999765432211100000 000000000000000 000000000000 0
Q ss_pred hHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCC
Q 020064 198 KETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYD 277 (331)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D 277 (331)
........ .......... ................ ...+....+..+ ++|+++|+|++|
T Consensus 151 ~~~~~~~~-----------~~~~~~~~~~------~~~~~~~~~~~~~~~~----~~~~~~~~~~~~-~~P~l~i~g~~D 208 (258)
T d1xkla_ 151 PKFLAHKL-----------YQLCSPEDLA------LASSLVRPSSLFMEDL----SKAKYFTDERFG-SVKRVYIVCTED 208 (258)
T ss_dssp HHHHHHHT-----------STTSCHHHHH------HHHHHCCCBCCCHHHH----HHCCCCCTTTGG-GSCEEEEEETTC
T ss_pred HHHHHHHh-----------hhcccHHHHH------Hhhhhhhhhhhhhhhh----hhhhhccccccc-ccceeEeeecCC
Confidence 00000000 0000000000 0000000000000000 011223345667 599999999999
Q ss_pred CccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhh
Q 020064 278 VCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNLI 327 (331)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 327 (331)
.++|++..+.+.+.+|++++++++++||+++.++ |+++++.|.+|+++.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~-P~~~~~~l~e~~~k~ 257 (258)
T d1xkla_ 209 KGIPEEFQRWQIDNIGVTEAIEIKGADHMAMLCE-PQKLCASLLEIAHKY 257 (258)
T ss_dssp TTTTHHHHHHHHHHHCCSEEEEETTCCSCHHHHS-HHHHHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHHCCCCEEEEECCCCCchHHhC-HHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999997 999999999999874
|
| >d3c70a1 c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber tree (Hevea brasiliensis) [TaxId: 3981]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Hydroxynitrile lyase species: Rubber tree (Hevea brasiliensis) [TaxId: 3981]
Probab=100.00 E-value=4.6e-35 Score=227.02 Aligned_cols=248 Identities=10% Similarity=-0.012 Sum_probs=152.2
Q ss_pred EEEeccCCCCC-CCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhC-CCcEEEEEeChhHH
Q 020064 48 VVFLHGGPGGG-TTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLE-IPEWQVFGGSWGST 125 (331)
Q Consensus 48 vl~~HG~~~~~-~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~lvG~S~Gg~ 125 (331)
.|||||+++++ .|..++..|.++||+|+++|+||||.|+.+.. ..++++++++++.++++.+. .++++++||||||.
T Consensus 5 ~vliHG~~~~~~~w~~~~~~L~~~g~~Via~Dl~G~G~S~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~lvGhS~Gg~ 83 (256)
T d3c70a1 5 FVLIHTICHGAWIWHKLKPLLEALGHKVTALDLAASGVDPRQIE-EIGSFDEYSEPLLTFLEALPPGEKVILVGESCGGL 83 (256)
T ss_dssp EEEECCTTCCGGGGTTHHHHHHHTTCEEEEECCTTSTTCSCCGG-GCCSHHHHTHHHHHHHHHSCTTCCEEEEEETTHHH
T ss_pred EEEeCCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCC-CCCCHHHHHHHhhhhhhhhccccceeecccchHHH
Confidence 58999976654 45566666667899999999999999986643 45789999999999988865 67899999999999
Q ss_pred HHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhccccC-CCchHHHHHH
Q 020064 126 LALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLN-SDDKETQYAA 204 (331)
Q Consensus 126 ~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 204 (331)
+++.++..+|++++++|+++++............. .......................... ..........
T Consensus 84 ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (256)
T d3c70a1 84 NIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVD--------KLMEVFPDWKDTTYFTYTKDGKEITGLKLGFTLLREN 155 (256)
T ss_dssp HHHHHHHHHGGGEEEEEEESCCCCCSSSCTTHHHH--------HHHHHSCCCTTCEEEEEEETTEEEEEEECCHHHHHHH
T ss_pred HHHHHhhcCchhhhhhheeccccCCcccchhhHhh--------hhhhhhhhhhhhHHHhhhccccccchhhhhhhhhhhh
Confidence 99999999999999999999765432211110000 00000000000000000000000000 0000000000
Q ss_pred HHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCCCccCCcc
Q 020064 205 ARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMS 284 (331)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~ 284 (331)
... ....... ........ ....+..... ..........+ ++|+++|+|++|.++|++.
T Consensus 156 ~~~----------~~~~~~~-------~~~~~~~~-~~~~~~~~~~---~~~~~~~~~~~-~~P~l~i~G~~D~~~~~~~ 213 (256)
T d3c70a1 156 LYT----------LCGPEEY-------ELAKMLTR-KGSLFQNILA---KRPFFTKEGYG-SIKKIYVWTDQDEIFLPEF 213 (256)
T ss_dssp TST----------TSCHHHH-------HHHHHHCC-CBCCCHHHHT---TSCCCCTTTGG-GSCEEEEECTTCSSSCHHH
T ss_pred hhh----------hcchhhH-------HHhhhhhh-hhhHHHhhhh---hcchhhhhhcc-ccceeEEeecCCCCCCHHH
Confidence 000 0000000 00000000 0000000000 11122234456 5999999999999999999
Q ss_pred hHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhh
Q 020064 285 AWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNLI 327 (331)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 327 (331)
.+.+.+.+|++++++++++||+++.++ |+++++.|.+|+++.
T Consensus 214 ~~~~~~~~p~~~~~~i~~agH~~~~e~-P~~~~~~l~~~~~~~ 255 (256)
T d3c70a1 214 QLWQIENYKPDKVYKVEGGDHKLQLTK-TKEIAEILQEVADTY 255 (256)
T ss_dssp HHHHHHHSCCSEEEECCSCCSCHHHHS-HHHHHHHHHHHHHHC
T ss_pred HHHHHHHCCCCEEEEECCCCCchHHhC-HHHHHHHHHHHHHhc
Confidence 999999999999999999999999997 999999999999864
|
| >d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Gastric lipase domain: Gastric lipase species: Dog (Canis familiaris) [TaxId: 9615]
Probab=100.00 E-value=1.9e-32 Score=224.37 Aligned_cols=302 Identities=10% Similarity=-0.029 Sum_probs=164.0
Q ss_pred CCCCccceeEeCCCceEEEEe--C------CCCCCCcEEEeccCCCCCCCCC-------cccccCCCCcEEEEecCCCCC
Q 020064 19 VEPYSTGILKVSDIHTIYWEQ--S------GNPTGHPVVFLHGGPGGGTTPS-------NRRFFDPDFYRIILFDQRGAG 83 (331)
Q Consensus 19 ~~~~~~~~~~~~~g~~l~~~~--~------g~~~~~~vl~~HG~~~~~~~~~-------~~~~~~~~g~~vi~~D~~G~G 83 (331)
..+.+++++++.||..|.... . +...+|+|||+||+++++..|. ++..|+++||+|+++|+||||
T Consensus 24 ~y~~e~h~v~t~DG~~l~~~ri~~~~~~~~~~~~~~~vlllHG~~~~~~~~~~~~~~~sla~~L~~~Gy~V~~~D~rG~G 103 (377)
T d1k8qa_ 24 GYPAEEYEVVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASATNWISNLPNNSLAFILADAGYDVWLGNSRGNT 103 (377)
T ss_dssp TCCCEEEEEECTTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTTCCGGGGSSSCTTTCHHHHHHHTTCEEEECCCTTST
T ss_pred CCCceEEEEEcCCCCEEEEEEecCCCCCCccCCCCCeEEEECCCccchhHHhhcCccchHHHHHHHCCCEEEEEcCCCCC
Confidence 356788999999997665432 1 2235689999999877655442 234456799999999999999
Q ss_pred CCCCCCCC-------Ccc-----chHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchh
Q 020064 84 KSTPHACL-------DQN-----TTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRK 151 (331)
Q Consensus 84 ~s~~~~~~-------~~~-----~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~ 151 (331)
.|+.+... ... ..+++.+++..+++.++.++++++||||||.+++.+|..+|+.+++++++.......
T Consensus 104 ~S~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~i~~i~~~~g~~~v~lvGhS~GG~ia~~~a~~~p~~~~~l~~~~~~~~~~ 183 (377)
T d1k8qa_ 104 WARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKTGQDKLHYVGHSQGTTIGFIAFSTNPKLAKRIKTFYALAPVA 183 (377)
T ss_dssp TSCEESSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHHCHHHHTTEEEEEEESCCS
T ss_pred CCCCCCCCCCcchhhccCCHHHHhhhhHHHHHHHHHHHcCCCCEEEEEecchHHHHHHHHHhhhhhhhhceeEeeccccc
Confidence 99854321 112 234667778888888999999999999999999999999999888888766433221
Q ss_pred hhhhhH-hhcccccCChhhHHhhhccCCcchhh-hhHHhhccccCCC--chHHHHHHHHHhhhHHHhhhcCCCChhhhh-
Q 020064 152 KEIDWF-YEGGAAAIYPDAWESFRDLIPENERS-CFVDAYSKRLNSD--DKETQYAAARAWTKWEMMTAHLLPNEENIK- 226 (331)
Q Consensus 152 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 226 (331)
...... ............+.. .......... .+........... ..............+ .....+.....
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 258 (377)
T d1k8qa_ 184 TVKYTETLINKLMLVPSFLFKL-IFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNALFIICGF----DTMNLNMSRLDV 258 (377)
T ss_dssp CCSSCCSGGGGGGTSCHHHHHH-HSCSSEESCCCHHHHHHHHHTTTBTTTHHHHHHHHHHHHCC----CGGGSCGGGHHH
T ss_pred cccchhhHHHHHHhcchhhhhh-hhhhhhccchhHHHHhhhhhhcchhhhhHHHHhhhhhhcCC----CcccccHHHhhh
Confidence 100000 000000000000000 0000000000 0000000000000 000000000000000 00000000000
Q ss_pred --c-CCc-cHH--HHHHhh-hhhhhhhccC---------CCCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHH
Q 020064 227 --R-GED-DIF--SLAFAR-IENHYFLNKG---------FFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHK 290 (331)
Q Consensus 227 --~-~~~-~~~--~~~~~~-~~~~~~~~~~---------~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~ 290 (331)
. ... ... ...+.. .....+.... ...........+.+| ++|+|+|+|++|.+++++.++.+.+
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i-~vPvL~i~G~~D~~~~~~~~~~l~~ 337 (377)
T d1k8qa_ 259 YLSHNPAGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDM-HVPIAVWNGGNDLLADPHDVDLLLS 337 (377)
T ss_dssp HHTTCCCCEEHHHHHHHHHHHHHCSCBCCCCSSHHHHHHHHSSSSCCBCCGGGC-CSCEEEEEETTCSSSCHHHHHHHHT
T ss_pred hhhcccccchHHHHHHHHHHHhcCcchhccchhhhhhhhhhcccCchhhhHhhC-CCCEEEEEeCCCCccCHHHHHHHHH
Confidence 0 000 000 000000 0000000000 000011223357888 5999999999999999999999999
Q ss_pred hCCCC-cEEEecCCCCCC--CcCCchhHHHHHHHHHHHh
Q 020064 291 AWPEA-DFKVVADAGHSA--NEPGIAAELVATNEKLKNL 326 (331)
Q Consensus 291 ~~~~~-~~~~~~~~gH~~--~~~~~~~~~~~~i~~fl~~ 326 (331)
.+|+. ++++++++||+. ..++.++++...|.+||++
T Consensus 338 ~lp~~~~~~~i~~~GH~d~~~~~~a~~~v~~~I~~fl~~ 376 (377)
T d1k8qa_ 338 KLPNLIYHRKIPPYNHLDFIWAMDAPQAVYNEIVSMMGT 376 (377)
T ss_dssp TCTTEEEEEEETTCCTTHHHHCTTHHHHTHHHHHHHHHT
T ss_pred HCCCCeEEEEeCCCCCcchhhccchHHHHHHHHHHHHhc
Confidence 99885 788899999973 2334589999999999974
|
| >d1qo7a_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Aspergillus niger [TaxId: 5061]
Probab=99.97 E-value=5.8e-32 Score=222.03 Aligned_cols=125 Identities=14% Similarity=0.089 Sum_probs=104.3
Q ss_pred ceeEeCCCceEEEEeC--CCCCCCcEEEeccCCCCCCCC-CcccccCCCC------cEEEEecCCCCCCCCCCCCCCccc
Q 020064 25 GILKVSDIHTIYWEQS--GNPTGHPVVFLHGGPGGGTTP-SNRRFFDPDF------YRIILFDQRGAGKSTPHACLDQNT 95 (331)
Q Consensus 25 ~~~~~~~g~~l~~~~~--g~~~~~~vl~~HG~~~~~~~~-~~~~~~~~~g------~~vi~~D~~G~G~s~~~~~~~~~~ 95 (331)
++...-+|.+|||... +.++++||||+||++++...| .++..+.+.| |+||++|+||||.|+.+.....++
T Consensus 84 ~f~~~i~G~~iHf~h~~~~~~~~~pLlLlHG~P~s~~~w~~vi~~La~~g~~~~~~f~VIaPDLpG~G~S~~P~~~~~y~ 163 (394)
T d1qo7a_ 84 QFTTEIEGLTIHFAALFSEREDAVPIALLHGWPGSFVEFYPILQLFREEYTPETLPFHLVVPSLPGYTFSSGPPLDKDFG 163 (394)
T ss_dssp EEEEEETTEEEEEEEECCSCTTCEEEEEECCSSCCGGGGHHHHHHHHHHCCTTTCCEEEEEECCTTSTTSCCCCSSSCCC
T ss_pred CeEEEECCEEEEEEEEeccCCCCCEEEEeccccccHHHHHHHHHhhccccCCcccceeeecccccccCCCCCCCCCCccC
Confidence 3434347889999643 445778999999999986654 4555554445 999999999999999876556799
Q ss_pred hHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccc
Q 020064 96 TWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLL 149 (331)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~ 149 (331)
..++++++..+++.++.++.+++|||+||.++..++..+|+++.++++++....
T Consensus 164 ~~~~a~~~~~l~~~lg~~~~~~vg~~~Gg~v~~~~a~~~p~~~~~~~l~~~~~~ 217 (394)
T d1qo7a_ 164 LMDNARVVDQLMKDLGFGSGYIIQGGDIGSFVGRLLGVGFDACKAVHLNLCAMR 217 (394)
T ss_dssp HHHHHHHHHHHHHHTTCTTCEEEEECTHHHHHHHHHHHHCTTEEEEEESCCCCC
T ss_pred HHHHHHHHHHHHhhccCcceEEEEecCchhHHHHHHHHhhccccceeEeeeccc
Confidence 999999999999999999999999999999999999999999999999876554
|
| >d1r3da_ c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein VC1974 domain: Hypothetical protein VC1974 species: Vibrio cholerae [TaxId: 666]
Probab=99.97 E-value=5.9e-32 Score=210.06 Aligned_cols=256 Identities=13% Similarity=0.053 Sum_probs=141.7
Q ss_pred eEEEEeCCCCCCCcEEEeccCCCCCC-CCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCC
Q 020064 34 TIYWEQSGNPTGHPVVFLHGGPGGGT-TPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEI 112 (331)
Q Consensus 34 ~l~~~~~g~~~~~~vl~~HG~~~~~~-~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (331)
+++|...+. ++|+|||+||++++.. |..++..+.+.||+|+++|+||||.|...... .........+........+.
T Consensus 6 ~lh~~~~~~-~~P~ivllHG~~~~~~~~~~~~~~L~~~g~~vi~~Dl~G~G~s~~~~~~-~~~~~~~~~~~~~~~~~~~~ 83 (264)
T d1r3da_ 6 QLHFAKPTA-RTPLVVLVHGLLGSGADWQPVLSHLARTQCAALTLDLPGHGTNPERHCD-NFAEAVEMIEQTVQAHVTSE 83 (264)
T ss_dssp EEESSCCBT-TBCEEEEECCTTCCGGGGHHHHHHHTTSSCEEEEECCTTCSSCC--------CHHHHHHHHHHHTTCCTT
T ss_pred eEEEcCCCC-CCCeEEEeCCCCCCHHHHHHHHHHHHhCCCEEEEEeccccccccccccc-ccchhhhhhhhccccccccc
Confidence 788877654 6788999999776644 55566667778999999999999999866532 22223333333344444566
Q ss_pred CcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhh-cc
Q 020064 113 PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAY-SK 191 (331)
Q Consensus 113 ~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 191 (331)
++++++||||||.+++.++.++|+.+.+++++.+................. .....+..... ........... ..
T Consensus 84 ~~~~lvGhS~Gg~ia~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~ 159 (264)
T d1r3da_ 84 VPVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQENEEKAARW-QHDQQWAQRFS---QQPIEHVLSDWYQQ 159 (264)
T ss_dssp SEEEEEEETHHHHHHHHHHHHTTTTTSEEEEEEEESCCCCCCSHHHHHHHH-HHHHHHHHHHH---HSCHHHHHHHHTTS
T ss_pred CceeeeeecchHHHHHHHHHhCchhccccccccccCCCccccchhhhhhhh-hhhhhhhhhhh---hhhhhhhhhhhhhh
Confidence 799999999999999999999999998888776544321110000000000 00000000000 00000000000 00
Q ss_pred ccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEE
Q 020064 192 RLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATI 271 (331)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~ 271 (331)
................. ..... ......... .. .........+.+..+ ++|+++
T Consensus 160 ~~~~~~~~~~~~~~~~~--------~~~~~--------~~~~~~~~~--------~~-~~~~~~~~~~~l~~~-~~p~l~ 213 (264)
T d1r3da_ 160 AVFSSLNHEQRQTLIAQ--------RSANL--------GSSVAHMLL--------AT-SLAKQPYLLPALQAL-KLPIHY 213 (264)
T ss_dssp GGGTTCCHHHHHHHHHH--------HTTSC--------HHHHHHHHH--------HT-CGGGCCCCHHHHHTC-SSCEEE
T ss_pred hhhcccchHHHHHHHHH--------Hhhhh--------hhhhHHhhh--------hc-cccccccchhhhhcc-CcceEE
Confidence 00000000000000000 00000 000000000 00 000022345577888 599999
Q ss_pred EecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhhh
Q 020064 272 VQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNLIK 328 (331)
Q Consensus 272 i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~ 328 (331)
++|++|..+. .+.+ .+++++++++++||+++.|+ |+++++.|.+||+++.
T Consensus 214 i~G~~D~~~~-----~~~~-~~~~~~~~i~~~gH~~~~e~-P~~~~~~i~~fl~~l~ 263 (264)
T d1r3da_ 214 VCGEQDSKFQ-----QLAE-SSGLSYSQVAQAGHNVHHEQ-PQAFAKIVQAMIHSII 263 (264)
T ss_dssp EEETTCHHHH-----HHHH-HHCSEEEEETTCCSCHHHHC-HHHHHHHHHHHHHHHC
T ss_pred EEeCCcHHHH-----HHHh-cCCCeEEEECCCCCchHHHC-HHHHHHHHHHHHHhcc
Confidence 9999996542 2333 36899999999999999997 9999999999999875
|
| >d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Myristoyl-ACP-specific thioesterase species: Vibrio harveyi [TaxId: 669]
Probab=99.97 E-value=7.8e-31 Score=206.88 Aligned_cols=226 Identities=10% Similarity=0.088 Sum_probs=145.1
Q ss_pred ccceeEeCCCceEEEEeCCC-----CCCCcEEEeccCCCC-CCCCCcccccCCCCcEEEEecCCCC-CCCCCCCCCCccc
Q 020064 23 STGILKVSDIHTIYWEQSGN-----PTGHPVVFLHGGPGG-GTTPSNRRFFDPDFYRIILFDQRGA-GKSTPHACLDQNT 95 (331)
Q Consensus 23 ~~~~~~~~~g~~l~~~~~g~-----~~~~~vl~~HG~~~~-~~~~~~~~~~~~~g~~vi~~D~~G~-G~s~~~~~~~~~~ 95 (331)
..+.+++.||.+++++...+ ..+++||++||++++ ..+..++..+.++||+|+++|+||| |.|+... ..++
T Consensus 5 ~~h~~~~~dg~~l~~w~~~p~~~~~~~~~~Vvi~HG~~~~~~~~~~~a~~L~~~G~~Vi~~D~rGh~G~S~g~~--~~~~ 82 (302)
T d1thta_ 5 IAHVLRVNNGQELHVWETPPKENVPFKNNTILIASGFARRMDHFAGLAEYLSTNGFHVFRYDSLHHVGLSSGSI--DEFT 82 (302)
T ss_dssp EEEEEEETTTEEEEEEEECCCTTSCCCSCEEEEECTTCGGGGGGHHHHHHHHTTTCCEEEECCCBCC----------CCC
T ss_pred eeeEEEcCCCCEEEEEEecCcCCCCCCCCEEEEeCCCcchHHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCcc--cCCC
Confidence 46789999999999886642 234579999997665 4456678888899999999999998 8887654 4677
Q ss_pred hHHHHHHHHHHHHHh---CCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHh
Q 020064 96 TWDLIDDIEKLRQHL---EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWES 172 (331)
Q Consensus 96 ~~~~~~~~~~~~~~~---~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (331)
+.++.+|+.++++.+ +.++++++||||||.+++.+|... +++++|+.+|....................
T Consensus 83 ~~~~~~dl~~vi~~l~~~~~~~i~lvG~SmGG~ial~~A~~~--~v~~li~~~g~~~~~~~~~~~~~~~~~~~~------ 154 (302)
T d1thta_ 83 MTTGKNSLCTVYHWLQTKGTQNIGLIAASLSARVAYEVISDL--ELSFLITAVGVVNLRDTLEKALGFDYLSLP------ 154 (302)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHTTTS--CCSEEEEESCCSCHHHHHHHHHSSCGGGSC------
T ss_pred HHHHHHHHHHHHHhhhccCCceeEEEEEchHHHHHHHHhccc--ccceeEeecccccHHHHHHHHHhhccchhh------
Confidence 888888888877766 567999999999999999988753 588999998876543322111110000000
Q ss_pred hhccCCcchhhhhHHhhccccCCC-chHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCC
Q 020064 173 FRDLIPENERSCFVDAYSKRLNSD-DKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFF 251 (331)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (331)
.......+... ...... .+...... . ..
T Consensus 155 -------------~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~-------~--~~ 183 (302)
T d1thta_ 155 -------------IDELPNDLDFEGHKLGSE-----------------------------VFVRDCFE-------H--HW 183 (302)
T ss_dssp -------------GGGCCSEEEETTEEEEHH-----------------------------HHHHHHHH-------T--TC
T ss_pred -------------hhhccccccccccchhhH-----------------------------HHHHHHHH-------h--HH
Confidence 00000000000 000000 00000000 0 00
Q ss_pred CCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCC--CCcEEEecCCCCCCCcC
Q 020064 252 PSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWP--EADFKVVADAGHSANEP 310 (331)
Q Consensus 252 ~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~ 310 (331)
.........+.++ ++|+|+++|++|.++|++.++++.+.++ ++++++++|+||.+..+
T Consensus 184 ~~~~~~~~~~~~i-~~PvLii~G~~D~~V~~~~~~~l~~~i~s~~~kl~~~~g~~H~l~e~ 243 (302)
T d1thta_ 184 DTLDSTLDKVANT-SVPLIAFTANNDDWVKQEEVYDMLAHIRTGHCKLYSLLGSSHDLGEN 243 (302)
T ss_dssp SSHHHHHHHHTTC-CSCEEEEEETTCTTSCHHHHHHHHTTCTTCCEEEEEETTCCSCTTSS
T ss_pred HHHHHHHHHHhhc-CCCEEEEEeCCCCccCHHHHHHHHHhCCCCCceEEEecCCCcccccC
Confidence 0012234567788 6999999999999999999999999885 58999999999997543
|
| >d1tqha_ c.69.1.29 (A:) Carboxylesterase Est {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/lipase domain: Carboxylesterase Est species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.97 E-value=1.5e-29 Score=193.73 Aligned_cols=226 Identities=18% Similarity=0.123 Sum_probs=141.1
Q ss_pred CCCcEEEeccCCCCCC-CCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHH---HHHHHHHhCCCcEEEEE
Q 020064 44 TGHPVVFLHGGPGGGT-TPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDD---IEKLRQHLEIPEWQVFG 119 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~-~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~v~lvG 119 (331)
++++|||+||++++.. +..++..+.++||+|+++|+||||.|.... ......+..++ +...++..+.++++++|
T Consensus 10 ~~~~vvliHG~~~~~~~~~~l~~~L~~~G~~v~~~D~~G~G~s~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G 87 (242)
T d1tqha_ 10 GERAVLLLHGFTGNSADVRMLGRFLESKGYTCHAPIYKGHGVPPEEL--VHTGPDDWWQDVMNGYEFLKNKGYEKIAVAG 87 (242)
T ss_dssp SSCEEEEECCTTCCTHHHHHHHHHHHHTTCEEEECCCTTSSSCHHHH--TTCCHHHHHHHHHHHHHHHHHHTCCCEEEEE
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEeCCCCccccccc--cccchhHHHHHHHHHHhhhhhcccCceEEEE
Confidence 4678999999776644 455666777789999999999999987543 22334444444 34445666888999999
Q ss_pred eChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhccccCCCchH
Q 020064 120 GSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKE 199 (331)
Q Consensus 120 ~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (331)
||+||.+++.++.++|... +++++++.......... .... .....+..........
T Consensus 88 ~S~Gg~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-------------~~~~---------~~~~~~~~~~~~~~~~ 143 (242)
T d1tqha_ 88 LSLGGVFSLKLGYTVPIEG--IVTMCAPMYIKSEETMY-------------EGVL---------EYAREYKKREGKSEEQ 143 (242)
T ss_dssp ETHHHHHHHHHHTTSCCSC--EEEESCCSSCCCHHHHH-------------HHHH---------HHHHHHHHHHTCCHHH
T ss_pred cchHHHHhhhhcccCcccc--cccccccccccchhHHH-------------HHHH---------HHHHHHhhhccchhhh
Confidence 9999999999999998654 45555433221110000 0000 0000000000000000
Q ss_pred HHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCCCc
Q 020064 200 TQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVC 279 (331)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~ 279 (331)
..... ....... .......... .......+..+ ++|+|+++|++|..
T Consensus 144 -~~~~~------~~~~~~~-----------~~~~~~~~~~--------------~~~~~~~~~~~-~~p~lii~g~~D~~ 190 (242)
T d1tqha_ 144 -IEQEM------EKFKQTP-----------MKTLKALQEL--------------IADVRDHLDLI-YAPTFVVQARHDEM 190 (242)
T ss_dssp -HHHHH------HHHTTSC-----------CTTHHHHHHH--------------HHHHHHTGGGC-CSCEEEEEETTCSS
T ss_pred -HHHHH------hhhhhhc-----------cchhhccccc--------------cccccccccee-ccccceeecccCCc
Confidence 00000 0000000 0000000000 12234467778 59999999999999
Q ss_pred cCCcchHHHHHhC--CCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhhh
Q 020064 280 CPMMSAWDLHKAW--PEADFKVVADAGHSANEPGIAAELVATNEKLKNLIK 328 (331)
Q Consensus 280 ~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~ 328 (331)
+|++.++.+.+.+ +++++++++++||+++.++.++++.+.|.+||+++.
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~Fl~~l~ 241 (242)
T d1tqha_ 191 INPDSANIIYNEIESPVKQIKWYEQSGHVITLDQEKDQLHEDIYAFLESLD 241 (242)
T ss_dssp SCTTHHHHHHHHCCCSSEEEEEETTCCSSGGGSTTHHHHHHHHHHHHHHSC
T ss_pred cCHHHHHHHHHHcCCCCcEEEEECCCCCcCccccCHHHHHHHHHHHHHhCC
Confidence 9999999999988 568899999999999887559999999999999873
|
| >d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=5.9e-29 Score=193.58 Aligned_cols=102 Identities=11% Similarity=0.045 Sum_probs=87.3
Q ss_pred CCCcEEEeccCCCCCCCCC-cccccCC--CCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCcEEEEEe
Q 020064 44 TGHPVVFLHGGPGGGTTPS-NRRFFDP--DFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGG 120 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~~~~-~~~~~~~--~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG~ 120 (331)
+.+||||+||++++...|. .+..+.+ .+|+|+++|+||||.|..+. .++++++++++.++++.++ ++++|+||
T Consensus 1 ~~~PvvllHG~~~~~~~~~~~~~~l~~~~~~~~v~~~d~~G~g~S~~~~---~~~~~~~~~~l~~~l~~l~-~~~~lvGh 76 (268)
T d1pjaa_ 1 SYKPVIVVHGLFDSSYSFRHLLEYINETHPGTVVTVLDLFDGRESLRPL---WEQVQGFREAVVPIMAKAP-QGVHLICY 76 (268)
T ss_dssp CCCCEEEECCTTCCGGGGHHHHHHHHHHSTTCCEEECCSSCSGGGGSCH---HHHHHHHHHHHHHHHHHCT-TCEEEEEE
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCcc---ccCHHHHHHHHHHHHhccC-CeEEEEcc
Confidence 4678999999877655444 5555543 48999999999999998664 5789999999999999999 99999999
Q ss_pred ChhHHHHHHHHHhCCC-ceeeEEEeccccc
Q 020064 121 SWGSTLALAYSLAHPD-KVTGLVLRGIFLL 149 (331)
Q Consensus 121 S~Gg~~a~~~a~~~p~-~v~~li~~~~~~~ 149 (331)
||||.+++.+|.++|+ +|+++|+++++..
T Consensus 77 S~GG~ia~~~a~~~p~~~v~~lvl~~~~~~ 106 (268)
T d1pjaa_ 77 SQGGLVCRALLSVMDDHNVDSFISLSSPQM 106 (268)
T ss_dssp THHHHHHHHHHHHCTTCCEEEEEEESCCTT
T ss_pred ccHHHHHHHHHHHCCccccceEEEECCCCc
Confidence 9999999999999998 6999999997554
|
| >d2fuka1 c.69.1.36 (A:3-220) XC6422 protein {Xanthomonas campestris [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: XC6422 protein species: Xanthomonas campestris [TaxId: 339]
Probab=99.95 E-value=3.7e-27 Score=174.45 Aligned_cols=193 Identities=14% Similarity=0.015 Sum_probs=134.2
Q ss_pred ceeEeCCCceEEEEeC---C-CCCC-CcEEEeccCC---CCCC---CCCcccccCCCCcEEEEecCCCCCCCCCCCCCCc
Q 020064 25 GILKVSDIHTIYWEQS---G-NPTG-HPVVFLHGGP---GGGT---TPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQ 93 (331)
Q Consensus 25 ~~~~~~~g~~l~~~~~---g-~~~~-~~vl~~HG~~---~~~~---~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~ 93 (331)
-+++..+| ++..... + .+.. +++|++|+.+ ++.. ....+..+.+.||.|+.+|+||+|.|........
T Consensus 11 l~i~gp~G-~l~~~~~~p~~~~~~~~~~~vl~Hph~~~GG~~~~~~~~~la~~l~~~G~~vlrfd~RG~G~S~g~~~~~~ 89 (218)
T d2fuka1 11 LTLDGPVG-PLDVAVDLPEPDVAVQPVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFRSVGTSAGSFDHGD 89 (218)
T ss_dssp EEEEETTE-EEEEEEECCCTTSCCCSEEEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEECCTTSTTCCSCCCTTT
T ss_pred EEEeCCCc-cEEEEEEcCCCCCCCCCcEEEEECCCCCCCcCCCChHHHHHHHHHHHcCCeEEEeecCCCccCCCccCcCc
Confidence 35666788 5544322 1 1122 3468888532 2222 2345667888999999999999999987643222
Q ss_pred cchHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhh
Q 020064 94 NTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESF 173 (331)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (331)
...+++...+..+.+..+.++++++||||||.+++.+|.+. .++++|+++++....
T Consensus 90 ~~~~D~~a~~~~~~~~~~~~~v~l~G~S~Gg~va~~~a~~~--~~~~lil~ap~~~~~---------------------- 145 (218)
T d2fuka1 90 GEQDDLRAVAEWVRAQRPTDTLWLAGFSFGAYVSLRAAAAL--EPQVLISIAPPAGRW---------------------- 145 (218)
T ss_dssp HHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHHH--CCSEEEEESCCBTTB----------------------
T ss_pred chHHHHHHHHHHHhhcccCceEEEEEEcccchhhhhhhccc--ccceEEEeCCcccch----------------------
Confidence 22333333344444555678999999999999999998875 478999998753200
Q ss_pred hccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCC
Q 020064 174 RDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPS 253 (331)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (331)
T Consensus 146 -------------------------------------------------------------------------------- 145 (218)
T d2fuka1 146 -------------------------------------------------------------------------------- 145 (218)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCC-CCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhhhc
Q 020064 254 DSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWP-EADFKVVADAGHSANEPGIAAELVATNEKLKNLIKN 329 (331)
Q Consensus 254 ~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~~ 329 (331)
. . ...++ .+|+|+|+|++|.++|++.++++.+.++ ..+++++||++|++.. + .+++.+.+.+|+++...
T Consensus 146 ~--~--~~~~~-~~P~Lvi~G~~D~~vp~~~~~~l~~~~~~~~~l~~i~ga~H~f~~-~-~~~l~~~~~~~v~~~l~ 215 (218)
T d2fuka1 146 D--F--SDVQP-PAQWLVIQGDADEIVDPQAVYDWLETLEQQPTLVRMPDTSHFFHR-K-LIDLRGALQHGVRRWLP 215 (218)
T ss_dssp C--C--TTCCC-CSSEEEEEETTCSSSCHHHHHHHHTTCSSCCEEEEETTCCTTCTT-C-HHHHHHHHHHHHGGGCS
T ss_pred h--h--hcccc-ccceeeEecCCCcCcCHHHHHHHHHHccCCceEEEeCCCCCCCCC-C-HHHHHHHHHHHHHHhcC
Confidence 0 0 01133 5999999999999999999999988775 5789999999998753 3 56799999999987643
|
| >d2jbwa1 c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine hydrolase {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: 2,6-dihydropseudooxynicotine hydrolase-like domain: 2,6-dihydropseudooxynicotine hydrolase species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=99.95 E-value=2e-26 Score=185.84 Aligned_cols=230 Identities=16% Similarity=0.084 Sum_probs=146.4
Q ss_pred CCccceeEeCCCceEEEEeC---CCCCCCcEEEeccCCCCC-CCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccch
Q 020064 21 PYSTGILKVSDIHTIYWEQS---GNPTGHPVVFLHGGPGGG-TTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTT 96 (331)
Q Consensus 21 ~~~~~~~~~~~g~~l~~~~~---g~~~~~~vl~~HG~~~~~-~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~ 96 (331)
+.+...+..+ |.+|..... ++.+.|+||++||+.++. .+......++++||.|+++|+||+|.|...... ..+.
T Consensus 105 ~~e~v~ip~d-g~~l~g~l~~P~~~~~~P~Vi~~hG~~~~~e~~~~~~~~l~~~G~~vl~~D~~G~G~s~~~~~~-~~~~ 182 (360)
T d2jbwa1 105 PAERHELVVD-GIPMPVYVRIPEGPGPHPAVIMLGGLESTKEESFQMENLVLDRGMATATFDGPGQGEMFEYKRI-AGDY 182 (360)
T ss_dssp CEEEEEEEET-TEEEEEEEECCSSSCCEEEEEEECCSSCCTTTTHHHHHHHHHTTCEEEEECCTTSGGGTTTCCS-CSCH
T ss_pred CeEEeecCcC-CcccceEEEecCCCCCceEEEEeCCCCccHHHHHHHHHHHHhcCCEEEEEccccccccCccccc-cccH
Confidence 4455566664 547765433 333346899999976653 345566777889999999999999999754421 2345
Q ss_pred HHHHHHHHHHHHHh---CCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhh
Q 020064 97 WDLIDDIEKLRQHL---EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESF 173 (331)
Q Consensus 97 ~~~~~~~~~~~~~~---~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (331)
+.....+.+++... +.++|.++||||||.+++.+|...| +++++|.+++....... .
T Consensus 183 ~~~~~~v~d~l~~~~~vd~~rI~l~G~S~GG~~Al~~A~~~p-ri~a~V~~~~~~~~~~~-----------------~-- 242 (360)
T d2jbwa1 183 EKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAACEP-RLAACISWGGFSDLDYW-----------------D-- 242 (360)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEESCCSCSTTG-----------------G--
T ss_pred HHHHHHHHHHHHhcccccccceeehhhhcccHHHHHHhhcCC-CcceEEEEcccccHHHH-----------------h--
Confidence 55556655555544 3468999999999999999999887 69999998875432100 0
Q ss_pred hccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCC
Q 020064 174 RDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPS 253 (331)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (331)
...... ...+........... .......
T Consensus 243 --~~~~~~----~~~~~~~~~~~~~~~--------------------------------~~~~~~~-------------- 270 (360)
T d2jbwa1 243 --LETPLT----KESWKYVSKVDTLEE--------------------------------ARLHVHA-------------- 270 (360)
T ss_dssp --GSCHHH----HHHHHHHTTCSSHHH--------------------------------HHHHHHH--------------
T ss_pred --hhhhhh----hHHHHHhccCCchHH--------------------------------HHHHHHh--------------
Confidence 000000 000000000000000 0000000
Q ss_pred cchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCCC--CcEEEecCCCCCCCcCCchhHHHHHHHHHHHhhh
Q 020064 254 DSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPE--ADFKVVADAGHSANEPGIAAELVATNEKLKNLIK 328 (331)
Q Consensus 254 ~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~ 328 (331)
..+....+.+| +||+|+++|++|. +|++.++.+.+.+++ .+++++++++|..... +.+....|.+||.+..
T Consensus 271 ~~~~~~~~~~i-~~P~Lii~G~~D~-vp~~~~~~l~~~~~~~~~~l~~~~~g~H~~~~~--~~~~~~~i~dWl~~~L 343 (360)
T d2jbwa1 271 ALETRDVLSQI-ACPTYILHGVHDE-VPLSFVDTVLELVPAEHLNLVVEKDGDHCCHNL--GIRPRLEMADWLYDVL 343 (360)
T ss_dssp HTCCTTTGGGC-CSCEEEEEETTSS-SCTHHHHHHHHHSCGGGEEEEEETTCCGGGGGG--TTHHHHHHHHHHHHHH
T ss_pred hcchhhhHhhC-CCCEEEEEeCCCC-cCHHHHHHHHHhcCCCCeEEEEECCCCcCCCcC--hHHHHHHHHHHHHHHh
Confidence 11223457788 5999999999998 588999999999864 5677789999975433 6677788888887754
|
| >d1uxoa_ c.69.1.31 (A:) Hypothetical protein YdeN {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: YdeN-like domain: Hypothetical protein YdeN species: Bacillus subtilis [TaxId: 1423]
Probab=99.93 E-value=9.2e-26 Score=165.61 Aligned_cols=178 Identities=15% Similarity=0.143 Sum_probs=124.4
Q ss_pred CcEEEeccCCCCCC--CC-CcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCcEEEEEeCh
Q 020064 46 HPVVFLHGGPGGGT--TP-SNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSW 122 (331)
Q Consensus 46 ~~vl~~HG~~~~~~--~~-~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG~S~ 122 (331)
+.||++||++++.. |+ .+...+.++||.|+++|+||+|.+ ..+++.+.+....+..+ ++++|+||||
T Consensus 2 k~V~~vHG~~~~~~~~~~~~l~~~L~~~G~~v~~~d~p~~~~~---------~~~~~~~~l~~~~~~~~-~~~~lvGhS~ 71 (186)
T d1uxoa_ 2 KQVYIIHGYRASSTNHWFPWLKKRLLADGVQADILNMPNPLQP---------RLEDWLDTLSLYQHTLH-ENTYLVAHSL 71 (186)
T ss_dssp CEEEEECCTTCCTTSTTHHHHHHHHHHTTCEEEEECCSCTTSC---------CHHHHHHHHHTTGGGCC-TTEEEEEETT
T ss_pred CEEEEECCCCCCcchhHHHHHHHHHHhCCCEEEEeccCCCCcc---------hHHHHHHHHHHHHhccC-CCcEEEEech
Confidence 46999999876532 32 356667789999999999999865 25667776666665544 7899999999
Q ss_pred hHHHHHHHHHhCCCce--eeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhccccCCCchHH
Q 020064 123 GSTLALAYSLAHPDKV--TGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKET 200 (331)
Q Consensus 123 Gg~~a~~~a~~~p~~v--~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (331)
||.+++.++.++|+.. .+++..+++...... .+ ....+..
T Consensus 72 Gg~~a~~~a~~~~~~~~~~~l~~~~~~~~~~~~---------------~~--------------~~~~~~~--------- 113 (186)
T d1uxoa_ 72 GCPAILRFLEHLQLRAALGGIILVSGFAKSLPT---------------LQ--------------MLDEFTQ--------- 113 (186)
T ss_dssp HHHHHHHHHHTCCCSSCEEEEEEETCCSSCCTT---------------CG--------------GGGGGTC---------
T ss_pred hhHHHHHHHHhCCccceeeEEeecccccccchh---------------hh--------------hhhhhhc---------
Confidence 9999999999998754 444444332211000 00 0000000
Q ss_pred HHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCCCcc
Q 020064 201 QYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCC 280 (331)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~ 280 (331)
.........++ .+|+++|+|++|+++
T Consensus 114 -----------------------------------------------------~~~~~~~~~~~-~~p~lvi~g~~D~~v 139 (186)
T d1uxoa_ 114 -----------------------------------------------------GSFDHQKIIES-AKHRAVIASKDDQIV 139 (186)
T ss_dssp -----------------------------------------------------SCCCHHHHHHH-EEEEEEEEETTCSSS
T ss_pred -----------------------------------------------------ccccccccccC-CCCEEEEecCCCCCC
Confidence 01111233345 599999999999999
Q ss_pred CCcchHHHHHhCCCCcEEEecCCCCCCCcCC--chhHHHHHHHHHHHh
Q 020064 281 PMMSAWDLHKAWPEADFKVVADAGHSANEPG--IAAELVATNEKLKNL 326 (331)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~--~~~~~~~~i~~fl~~ 326 (331)
|++.++.+++.+ ++++++++++||+...+. ...++.+.|.+|+++
T Consensus 140 p~~~~~~l~~~~-~~~~~~~~~~gH~~~~~~~~~~~~~~~~l~~~~~~ 186 (186)
T d1uxoa_ 140 PFSFSKDLAQQI-DAALYEVQHGGHFLEDEGFTSLPIVYDVLTSYFSK 186 (186)
T ss_dssp CHHHHHHHHHHT-TCEEEEETTCTTSCGGGTCSCCHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHc-CCEEEEeCCCCCcCccccCcccHHHHHHHHHHHcC
Confidence 999999999988 789999999999875442 246799999999874
|
| >d2vata1 c.69.1.40 (A:7-382) Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG {Acremonium chrysogenum [TaxId: 5044]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG species: Acremonium chrysogenum [TaxId: 5044]
Probab=99.93 E-value=1.8e-24 Score=171.93 Aligned_cols=279 Identities=13% Similarity=0.131 Sum_probs=168.8
Q ss_pred eEEEEeCCCC---CCCcEEEeccCCCCCC---CCCcc----cccCCCCcEEEEecCCCCCCCCCCC--------------
Q 020064 34 TIYWEQSGNP---TGHPVVFLHGGPGGGT---TPSNR----RFFDPDFYRIILFDQRGAGKSTPHA-------------- 89 (331)
Q Consensus 34 ~l~~~~~g~~---~~~~vl~~HG~~~~~~---~~~~~----~~~~~~g~~vi~~D~~G~G~s~~~~-------------- 89 (331)
+|.|.++|.. ..++||++|++.++.. ||... ..+....|.||++|..|.|.+...+
T Consensus 30 ~laY~t~G~ln~~~~NaVlv~h~ltg~~~~~~WW~~liG~g~alDt~kyfVI~~n~lG~~~gst~p~s~~p~~~~~~~yg 109 (376)
T d2vata1 30 PVAYKSWGRMNVSRDNCVIVCHTLTSSAHVTSWWPTLFGQGRAFDTSRYFIICLNYLGSPFGSAGPCSPDPDAEGQRPYG 109 (376)
T ss_dssp EEEEEEESCCCTTSCCEEEEECCTTCCSCGGGTCGGGBSTTSSBCTTTCEEEEECCTTCSSSSSSTTSBCTTTC--CBCG
T ss_pred eEEEEeecccCCCCCCEEEEcCCCcCCccccccHHHhCCCCCccCccceEEEEeccCCCCcCCCCCCCCCcccccCCccc
Confidence 6789999963 3467999999766543 44322 3455588999999999877543211
Q ss_pred -CCCccchHHHHHHHHHHHHHhCCCcEE-EEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhccc-ccCC
Q 020064 90 -CLDQNTTWDLIDDIEKLRQHLEIPEWQ-VFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGA-AAIY 166 (331)
Q Consensus 90 -~~~~~~~~~~~~~~~~~~~~~~~~~v~-lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~-~~~~ 166 (331)
....+++.|+++....++++||++++. ++|.||||+.|+.+|..+|++++++|.+++..........+..... ....
T Consensus 110 ~~FP~~ti~D~v~aq~~ll~~LGI~~l~aViG~SmGGmqal~wa~~~Pd~v~~li~Ia~~~~~s~~~~a~~~~~~~ai~~ 189 (376)
T d2vata1 110 AKFPRTTIRDDVRIHRQVLDRLGVRQIAAVVGASMGGMHTLEWAFFGPEYVRKIVPIATSCRQSGWCAAWFETQRQCIYD 189 (376)
T ss_dssp GGCCCCCHHHHHHHHHHHHHHHTCCCEEEEEEETHHHHHHHHHGGGCTTTBCCEEEESCCSBCCHHHHHHHHHHHHHHHH
T ss_pred ccCCcchhHHHHHHHHHHHHHhCcceEEEeecccHHHHHHHHHHHhchHHHhhhcccccccccchHHHHHHHHHHHHhhc
Confidence 123468899999999999999999975 7899999999999999999999999999987765432111110000 0000
Q ss_pred hhhHHhhh-----------------ccCCcchhhhhHHhhccccCCCchHH------H-----------------HHHHH
Q 020064 167 PDAWESFR-----------------DLIPENERSCFVDAYSKRLNSDDKET------Q-----------------YAAAR 206 (331)
Q Consensus 167 ~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~------~-----------------~~~~~ 206 (331)
...|.... ..+.......+..++........... . .....
T Consensus 190 Dp~w~~G~Y~~~~~p~~GL~~Ar~~~~~ty~S~~~~~~rf~~~~~~~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ve 269 (376)
T d2vata1 190 DPKYLDGEYDVDDQPVRGLETARKIANLTYKSKPAMDERFHMAPGVQAGRNISSQDAKKEINGTDSGNSHRAGQPIEAVS 269 (376)
T ss_dssp STTSGGGTCCTTSCCHHHHHHHHHHHHHHTSCHHHHHHHSCCCCCCC---------------------------CGGGHH
T ss_pred cccccCCCccccchhHHHHHHHHHHHHHHhcCHHHHHHHHhhccccccccccccchhhhcccccccccccccccchhHHH
Confidence 00111000 00000000111111111100000000 0 00001
Q ss_pred HhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCCCccCCcchH
Q 020064 207 AWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAW 286 (331)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~ 286 (331)
.|... .........+...+......+...-... ....++.+.|.+| ++|+|+|.++.|.+.|++..+
T Consensus 270 syL~~--------~g~k~~~rfDansyl~l~~a~d~~Di~~----~~~g~l~~aL~~I-~a~~LvI~~~sD~lFPp~~~~ 336 (376)
T d2vata1 270 SYLRY--------QAQKFAASFDANCYIAMTLKFDTHDISR----GRAGSIPEALAMI-TQPALIICARSDGLYSFDEHV 336 (376)
T ss_dssp HHHHH--------HHHHHHHSSCHHHHHHHHHHHHTCBTTT----TTCSSHHHHHTTC-CSCEEEEECTTCSSSCHHHHH
T ss_pred HHHHH--------HHhhhhcccccccHHHHHHHHHhccccc----ccCCCHHHHHhhC-CCCEEEEEeCcccCcCHHHHH
Confidence 11100 0112223333333333333322111100 0123567789999 599999999999999999999
Q ss_pred HHHHhCCCCcEEEec-CCCCCCCcCCchhHHHHHHHHHHHh
Q 020064 287 DLHKAWPEADFKVVA-DAGHSANEPGIAAELVATNEKLKNL 326 (331)
Q Consensus 287 ~~~~~~~~~~~~~~~-~~gH~~~~~~~~~~~~~~i~~fl~~ 326 (331)
++++.+|++++++|+ ..||..++.+ ++.+.+.|.+||++
T Consensus 337 e~a~~l~~a~~~~I~S~~GHDaFL~e-~~~~~~~I~~FL~q 376 (376)
T d2vata1 337 EMGRSIPNSRLCVVDTNEGHDFFVME-ADKVNDAVRGFLDQ 376 (376)
T ss_dssp HHHHHSTTEEEEECCCSCGGGHHHHT-HHHHHHHHHHHHTC
T ss_pred HHHHhcCCCeEEEECCCCCccccccC-HHHHHHHHHHHHcC
Confidence 999999999999997 6799766555 89999999999974
|
| >d2hu7a2 c.69.1.33 (A:322-581) Acylamino-acid-releasing enzyme, C-terminal donain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acylamino-acid-releasing enzyme, C-terminal donain domain: Acylamino-acid-releasing enzyme, C-terminal donain species: Aeropyrum pernix [TaxId: 56636]
Probab=99.92 E-value=7.9e-25 Score=169.24 Aligned_cols=229 Identities=14% Similarity=0.125 Sum_probs=147.9
Q ss_pred ccceeEeCCCceEEEEeC---C-CCCCCcEEEeccCCCCC---CCCCcccccCCCCcEEEEecCCCCCCCCCCCC-----
Q 020064 23 STGILKVSDIHTIYWEQS---G-NPTGHPVVFLHGGPGGG---TTPSNRRFFDPDFYRIILFDQRGAGKSTPHAC----- 90 (331)
Q Consensus 23 ~~~~~~~~~g~~l~~~~~---g-~~~~~~vl~~HG~~~~~---~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~----- 90 (331)
+.-++++.||.+|..... . +.+.|+||++|||+.+. .+......++++||.|+++|+||++.+.....
T Consensus 13 ~~v~~~s~dG~~i~~~l~~p~~~~~~~Pviv~~HGG~~~~~~~~~~~~~~~la~~G~~v~~~d~r~~~~~g~~~~~~~~~ 92 (260)
T d2hu7a2 13 RLVWVESFDGSRVPTYVLESGRAPTPGPTVVLVHGGPFAEDSDSWDTFAASLAAAGFHVVMPNYRGSTGYGEEWRLKIIG 92 (260)
T ss_dssp EEEEEECTTSCEEEEEEEEETTSCSSEEEEEEECSSSSCCCCSSCCHHHHHHHHHTCEEEEECCTTCSSSCHHHHHTTTT
T ss_pred EEEEEECCCCCEEEEEEEeCCCCCCCceEEEEECCCCccCCCccccHHHHHHHhhccccccceeeecccccccccccccc
Confidence 445788899988865432 2 12346799999954432 23344555778999999999999877653210
Q ss_pred -CCccchHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhh
Q 020064 91 -LDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDA 169 (331)
Q Consensus 91 -~~~~~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (331)
......+++.+.+..+.+.....++.++|+|+||..++.++..+|+.+++++..++........
T Consensus 93 ~~~~~~~~D~~~~~~~l~~~~~~~~~~i~g~s~gg~~~~~~~~~~~~~~~a~i~~~~~~~~~~~~--------------- 157 (260)
T d2hu7a2 93 DPCGGELEDVSAAARWARESGLASELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASVVDWEEMY--------------- 157 (260)
T ss_dssp CTTTHHHHHHHHHHHHHHHTTCEEEEEEEEETHHHHHHHHHHHHSTTSSSEEEEESCCCCHHHHH---------------
T ss_pred ccchhhhhhhcccccccccccccceeeccccccccccccchhccCCcccccccccccchhhhhhh---------------
Confidence 0112234444444444555556789999999999999999999999999999888765432100
Q ss_pred HHhhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccC
Q 020064 170 WESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKG 249 (331)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (331)
.... . ....+..... ....+.+.
T Consensus 158 -----~~~~-~----~~~~~~~~~~------------------------~~~~~~~~----------------------- 180 (260)
T d2hu7a2 158 -----ELSD-A----AFRNFIEQLT------------------------GGSREIMR----------------------- 180 (260)
T ss_dssp -----HTCC-H----HHHHHHHHHH------------------------CSCHHHHH-----------------------
T ss_pred -----cccc-c----cccccccccc------------------------cccccccc-----------------------
Confidence 0000 0 0000000000 00001000
Q ss_pred CCCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhC----CCCcEEEecCCCCCCCcCCchhHHHHHHHHHHH
Q 020064 250 FFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAW----PEADFKVVADAGHSANEPGIAAELVATNEKLKN 325 (331)
Q Consensus 250 ~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~ 325 (331)
..+....+.++ ++|+|+++|++|..+|++.+..+.+.+ .+++++++|++||.+...+..+++++.+.+||+
T Consensus 181 ----~~~~~~~~~~~-~~P~liihG~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~e~~~~~~~~~~~fl~ 255 (260)
T d2hu7a2 181 ----SRSPINHVDRI-KEPLALIHPQNDSRTPLKPLLRLMGELLARGKTFEAHIIPDAGHAINTMEDAVKILLPAVFFLA 255 (260)
T ss_dssp ----HTCGGGCGGGC-CSCEEEEEETTCSSSCSHHHHHHHHHHHHTTCCEEEEEETTCCSSCCBHHHHHHHHHHHHHHHH
T ss_pred ----ccchhhccccc-CCCceeeecccCceecHHHHHHHHHHHHHCCCCeEEEEECcCCCCCCChHhHHHHHHHHHHHHH
Confidence 11233456778 599999999999999999998888765 356899999999987654347788889999998
Q ss_pred hhh
Q 020064 326 LIK 328 (331)
Q Consensus 326 ~~~ 328 (331)
+-.
T Consensus 256 ~hl 258 (260)
T d2hu7a2 256 TQR 258 (260)
T ss_dssp HHH
T ss_pred HHh
Confidence 754
|
| >d2h7xa1 c.69.1.22 (A:9-291) Picromycin polyketide synthase {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Picromycin polyketide synthase species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.92 E-value=1.4e-24 Score=169.20 Aligned_cols=214 Identities=13% Similarity=0.028 Sum_probs=135.9
Q ss_pred CCCcEEEeccC--CCCCC-CCCcccccCCCCcEEEEecCCCCCCCCCCCC-CCccchHHHHHHHHH-HHHHhCCCcEEEE
Q 020064 44 TGHPVVFLHGG--PGGGT-TPSNRRFFDPDFYRIILFDQRGAGKSTPHAC-LDQNTTWDLIDDIEK-LRQHLEIPEWQVF 118 (331)
Q Consensus 44 ~~~~vl~~HG~--~~~~~-~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~v~lv 118 (331)
..|+++|+||+ +++.. |..++..+ ..+++|+++|+||||.++.... ....+++++++++.+ +++..+..+++|+
T Consensus 59 ~~~~l~c~~~~~~~g~~~~y~~la~~L-~~~~~V~al~~pG~~~~~~~~~~~~~~s~~~~a~~~~~~i~~~~~~~P~vL~ 137 (283)
T d2h7xa1 59 GRAVLVGCTGTAANGGPHEFLRLSTSF-QEERDFLAVPLPGYGTGTGTGTALLPADLDTALDAQARAILRAAGDAPVVLL 137 (283)
T ss_dssp CCCEEEEECCCCTTCSTTTTHHHHHTT-TTTCCEEEECCTTCCBC---CBCCEESSHHHHHHHHHHHHHHHHTTSCEEEE
T ss_pred CCceEEEeCCCCCCCCHHHHHHHHHhc-CCCceEEEEeCCCCCCCCCCccccccCCHHHHHHHHHHHHHHhcCCCceEEE
Confidence 56889999984 33333 34444454 6789999999999999875442 123588999988655 6677888899999
Q ss_pred EeChhHHHHHHHHHhC----CCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhccccC
Q 020064 119 GGSWGSTLALAYSLAH----PDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLN 194 (331)
Q Consensus 119 G~S~Gg~~a~~~a~~~----p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (331)
||||||.+++.+|.+. ++.+.++|++++........... +.. ...........
T Consensus 138 GhS~GG~vA~e~A~~l~~~~g~~v~~LvL~d~~~~~~~~~~~~------------~~~-----------~~~~~~~~~~~ 194 (283)
T d2h7xa1 138 GHSGGALLAHELAFRLERAHGAPPAGIVLVDPYPPGHQEPIEV------------WSR-----------QLGEGLFAGEL 194 (283)
T ss_dssp EETHHHHHHHHHHHHHHHHHSCCCSEEEEESCCCTTCCHHHHH------------THH-----------HHHHHHHHTCS
T ss_pred EeccchHHHHHHHHhhHHHcCCCceEEEEecCCccccccchhh------------hhh-----------hhHHHhhcccc
Confidence 9999999999999864 56799999999865432111000 000 00000000000
Q ss_pred CCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEec
Q 020064 195 SDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQG 274 (331)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G 274 (331)
. ......+. ...... .. ........+ ++|+++++|
T Consensus 195 ~-----------------------~~~~~~l~--------a~~~~~--~~-----------~~~~~~~~~-~~Pvl~i~g 229 (283)
T d2h7xa1 195 E-----------------------PMSDARLL--------AMGRYA--RF-----------LAGPRPGRS-SAPVLLVRA 229 (283)
T ss_dssp S-----------------------CCCHHHHH--------HHHHHH--HH-----------HHSCCCCCC-CSCEEEEEE
T ss_pred c-----------------------ccccHHHH--------HHHHHH--HH-----------Hhhcccccc-CCCeEEEEe
Confidence 0 00000000 000000 00 000123456 699999999
Q ss_pred CCCCccCCcchHHHHHhCCC-CcEEEecCCCCCCCcCCchhHHHHHHHHHHHhh
Q 020064 275 RYDVCCPMMSAWDLHKAWPE-ADFKVVADAGHSANEPGIAAELVATNEKLKNLI 327 (331)
Q Consensus 275 ~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 327 (331)
++|..++.+....+.+..++ .++++++| ||+.+.++.++.+++.|.+||+++
T Consensus 230 ~~d~~~~~~~~~~w~~~~~~~~~~~~v~G-~H~~ml~e~~~~vA~~i~~~L~~l 282 (283)
T d2h7xa1 230 SEPLGDWQEERGDWRAHWDLPHTVADVPG-DHFTMMRDHAPAVAEAVLSWLDAI 282 (283)
T ss_dssp SSCSSCCCGGGCCCSCCCSSCSEEEEESS-CTTHHHHTTHHHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHhCCCCcEEEEEcC-CCcccccCCHHHHHHHHHHHHHhc
Confidence 99999998888777777754 68889985 898654334999999999999976
|
| >d2pl5a1 c.69.1.40 (A:5-366) Homoserine O-acetyltransferase {Leptospira interrogans [TaxId: 173]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Leptospira interrogans [TaxId: 173]
Probab=99.92 E-value=1.8e-23 Score=165.28 Aligned_cols=286 Identities=16% Similarity=0.149 Sum_probs=164.4
Q ss_pred ceEEEEeCCCCC---CCcEEEeccCCCCC-------------CCCCc----ccccCCCCcEEEEecCCCCCCCCCCCC--
Q 020064 33 HTIYWEQSGNPT---GHPVVFLHGGPGGG-------------TTPSN----RRFFDPDFYRIILFDQRGAGKSTPHAC-- 90 (331)
Q Consensus 33 ~~l~~~~~g~~~---~~~vl~~HG~~~~~-------------~~~~~----~~~~~~~g~~vi~~D~~G~G~s~~~~~-- 90 (331)
.+|.|.++|..+ .++||++|++.++. .||.. -..+..+.|.||++|..|.|.|..++.
T Consensus 27 ~~l~Y~t~G~ln~~~~NaVlv~h~~tG~~~~~g~~~~~~~~~gww~~liG~g~~lDt~~yfVI~~n~lG~~~~ss~~~s~ 106 (362)
T d2pl5a1 27 VVIAYETYGTLSSSKNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDTNQYFIICSNVIGGCKGSSGPLSI 106 (362)
T ss_dssp EEEEEEEEECCCTTSCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSSSSSSTTSB
T ss_pred ceEEEEeeeccCCCCCCEEEECCCCCcchhccccCCccCCCcchHHHhcCCCCccCccccEEEeeccccCcccccCcccc
Confidence 378999999642 36899999976653 23221 223345789999999999887654321
Q ss_pred -----------CCccchHHHHHHHHHHHHHhCCCcEE-EEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHh
Q 020064 91 -----------LDQNTTWDLIDDIEKLRQHLEIPEWQ-VFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFY 158 (331)
Q Consensus 91 -----------~~~~~~~~~~~~~~~~~~~~~~~~v~-lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~ 158 (331)
....++.|++.....+++++|++++. ++|.||||+.|+.+|..||+.++++|.+++..........+.
T Consensus 107 ~p~~~~~yg~~fP~~t~~D~v~~~~~ll~~LGI~~l~~viG~SmGGmqAl~wA~~yPd~v~~~v~ia~sa~~s~~~~~~~ 186 (362)
T d2pl5a1 107 HPETSTPYGSRFPFVSIQDMVKAQKLLVESLGIEKLFCVAGGSMGGMQALEWSIAYPNSLSNCIVMASTAEHSAMQIAFN 186 (362)
T ss_dssp CTTTSSBCGGGSCCCCHHHHHHHHHHHHHHTTCSSEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSBCCHHHHHHH
T ss_pred ccccccccCcCCccchhHHHHHHHHHHHHHhCcCeeEEEeehhHHHHHHHHHHHhCchHhhhhcccccccccCHHHHHHH
Confidence 23367889999999999999999988 779999999999999999999999999998776543222111
Q ss_pred hcc-cccCChhhHHhhhc-cCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHH------hhhcC-CCChhhhhcCC
Q 020064 159 EGG-AAAIYPDAWESFRD-LIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEM------MTAHL-LPNEENIKRGE 229 (331)
Q Consensus 159 ~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~-~~~~~~~~~~~ 229 (331)
... ........|....- ..++.......+.+................+....-.. ....+ ..........+
T Consensus 187 ~~~~~aI~~Dp~~~~G~Y~~~~P~~GL~~AR~~~~~~y~s~~~~~~~f~~~~~~~~~~~~~~~ve~yl~~~g~k~~~rfD 266 (362)
T d2pl5a1 187 EVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPRGNILSTDFAVGSYLIYQGESFVDRFD 266 (362)
T ss_dssp HHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCSSCTTTTTTTSCGGGGSTTCCSSSCCC
T ss_pred HHHHHHHhcCCccccCCcccCChhHHHHHHHHHHHHHHcCchhhhhhhccccccccccchhHHHHHHHHHHHHHHHhcCC
Confidence 110 00000011111000 00000000011111111000000000000000000000 00000 00001111122
Q ss_pred ccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCCCC----cEEEec-CCC
Q 020064 230 DDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEA----DFKVVA-DAG 304 (331)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~----~~~~~~-~~g 304 (331)
...+......+... .... ..++.+.|++| ++|+|+|..+.|.++|++..+.+++.+|++ ++++++ ..|
T Consensus 267 an~yl~l~~a~~~~-----Di~~-~~~l~~aL~~I-~AkvLvi~~~sD~lFpp~~~~~~a~~l~~a~~~v~~~eI~S~~G 339 (362)
T d2pl5a1 267 ANSYIYVTKALDHY-----SLGK-GKELTAALSNA-TCRFLVVSYSSDWLYPPAQSREIVKSLEAADKRVFYVELQSGEG 339 (362)
T ss_dssp HHHHHHHHHHHHHC-----BCCS-HHHHHHHHTTC-CSEEEEEEETTCCSSCHHHHHHHHHHHHHTTCCEEEEEECCCBS
T ss_pred HHHHHHHHhhhhcc-----cccc-cccHHHHHhhC-CCCEEEEEeCcccCcCHHHHHHHHHHHHhCCCCeEEEEeCCCCC
Confidence 22222222222111 1111 34567789999 599999999999999999999999988643 566674 559
Q ss_pred CCCCcCCchhHHHHHHHHHHHh
Q 020064 305 HSANEPGIAAELVATNEKLKNL 326 (331)
Q Consensus 305 H~~~~~~~~~~~~~~i~~fl~~ 326 (331)
|..++.+ .+++.+.|.+||+.
T Consensus 340 HdaFL~e-~~~~~~~I~~FL~~ 360 (362)
T d2pl5a1 340 HDSFLLK-NPKQIEILKGFLEN 360 (362)
T ss_dssp SGGGGSC-CHHHHHHHHHHHHC
T ss_pred cchhccC-HHHHHHHHHHHHcC
Confidence 9887776 88999999999974
|
| >d2b61a1 c.69.1.40 (A:2-358) Homoserine O-acetyltransferase {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Haemophilus influenzae [TaxId: 727]
Probab=99.92 E-value=3e-23 Score=163.70 Aligned_cols=283 Identities=15% Similarity=0.139 Sum_probs=161.5
Q ss_pred ceEEEEeCCCCC---CCcEEEeccCCCCCC---------CCCcc----cccCCCCcEEEEecCCCCCCCCCCC-------
Q 020064 33 HTIYWEQSGNPT---GHPVVFLHGGPGGGT---------TPSNR----RFFDPDFYRIILFDQRGAGKSTPHA------- 89 (331)
Q Consensus 33 ~~l~~~~~g~~~---~~~vl~~HG~~~~~~---------~~~~~----~~~~~~g~~vi~~D~~G~G~s~~~~------- 89 (331)
.+|.|.++|..+ .++||++|++.++.. ||..+ ..+....|.||++|..|.|.+..++
T Consensus 24 ~~laY~t~G~ln~~~~NaVlv~h~~tg~~~~~~~~~~~gWW~~liG~g~alDt~kyfVI~~n~lG~~~gSs~p~s~~p~t 103 (357)
T d2b61a1 24 INVAYQTYGTLNDEKNNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDTDRYFFISSNVLGGCKGTTGPSSINPQT 103 (357)
T ss_dssp EEEEEEEESCCCTTCCCEEEEECCTTCCSCSCCSSSCCCTTGGGEETTSSEETTTCEEEEECCTTCSSSSSCTTSBCTTT
T ss_pred ceEEEEeecccCCCCCCEEEEcCCCCccccccccCCCCCcHHHhcCCCCccCCCceEEEEecccCCccccCCcCCCCCCC
Confidence 378999999643 368999999766532 33222 2344578999999999976543221
Q ss_pred ------CCCccchHHHHHHHHHHHHHhCCCcEE-EEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhc-c
Q 020064 90 ------CLDQNTTWDLIDDIEKLRQHLEIPEWQ-VFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEG-G 161 (331)
Q Consensus 90 ------~~~~~~~~~~~~~~~~~~~~~~~~~v~-lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~-~ 161 (331)
.....++.|+++....+++++|++++. ++|.||||+.|+.+|.++|++++++|.+++..........+... .
T Consensus 104 g~~~g~~FP~iti~D~v~aq~~Ll~~LGI~~l~~viG~SmGGmqAl~wa~~~Pd~v~~~i~i~~~a~~s~~~~~~~~~~~ 183 (357)
T d2b61a1 104 GKPYGSQFPNIVVQDIVKVQKALLEHLGISHLKAIIGGSFGGMQANQWAIDYPDFMDNIVNLCSSIYFSAEAIGFNHVMR 183 (357)
T ss_dssp SSBCGGGCCCCCHHHHHHHHHHHHHHTTCCCEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSSCCHHHHHHHHHHH
T ss_pred CCCCCcccccchhHHHHHHHHHHHHHhCcceEEEEecccHHHHHHHHHHHhhhHHHhhhcccccccccchhHHHHHHHHH
Confidence 123478999999999999999999985 67999999999999999999999999999876543322111110 0
Q ss_pred cccCChhhHHh--hhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCC------------hhhhhc
Q 020064 162 AAAIYPDAWES--FRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPN------------EENIKR 227 (331)
Q Consensus 162 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~ 227 (331)
........|.. +....++.......+.+.. +....... ....+.+........... ......
T Consensus 184 ~aI~~Dp~~~~G~Y~~~~~p~~GL~~Ar~~a~-~ty~s~~~---~~~~f~r~~~~~~~~~~~~~~vesyL~~~g~kf~~r 259 (357)
T d2b61a1 184 QAVINDPNFNGGDYYEGTPPDQGLSIARMLGM-LTYRTDLQ---LAKAFGRATKSDGSFWGDYFQVESYLSYQGKKFLER 259 (357)
T ss_dssp HHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHH-HHHSCHHH---HHHHTTTCBCTTCCTTSCCBHHHHHHHHHHHHHHTT
T ss_pred HHHHcCCCCCCCCcccCCCchhHHHHHHHHHH-hhccCHHH---HHHHhccccccccccccchhhHHHHHHHHHHHHHhh
Confidence 00000001110 0000000000000000000 00000000 000000000000000000 001111
Q ss_pred CCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCC----CCcEEEecCC
Q 020064 228 GEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWP----EADFKVVADA 303 (331)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~ 303 (331)
.+...+......+... .......++.+.|++| ++|+|+|..+.|.+.|++..+.+++.++ ++++++++.-
T Consensus 260 fDan~yl~l~~a~~~~-----D~~~~~~~l~~aL~~I-~a~vLvi~~~sD~lFpp~~~~~~a~~l~~~~~~v~~~~I~S~ 333 (357)
T d2b61a1 260 FDANSYLHLLRALDMY-----DPSLGYENVKEALSRI-KARYTLVSVTTDQLFKPIDLYKSKQLLEQSGVDLHFYEFPSD 333 (357)
T ss_dssp CCHHHHHHHHHHHHHC-----CTTTTSSCHHHHHTTC-CSEEEEEEETTCSSSCHHHHHHHHHHHHHTTCEEEEEEECCT
T ss_pred CCHHHHHHHHHHhhhc-----ccccccccHHHHHhhc-CCCEEEEEeCCccccCHHHHHHHHHHHHhcCCCeEEEEECCC
Confidence 1222222222221111 1111245677889999 5999999999999999998888888774 4578888754
Q ss_pred -CCCCCcCCchhHHHHHHHHHHHh
Q 020064 304 -GHSANEPGIAAELVATNEKLKNL 326 (331)
Q Consensus 304 -gH~~~~~~~~~~~~~~i~~fl~~ 326 (331)
||..++.+ .+++.+.|.+||+.
T Consensus 334 ~GHdafL~e-~~~~~~~I~~fL~~ 356 (357)
T d2b61a1 334 YGHDAFLVD-YDQFEKRIRDGLAG 356 (357)
T ss_dssp TGGGHHHHC-HHHHHHHHHHHHHT
T ss_pred CCccccCcC-HHHHHHHHHHHHcc
Confidence 99876665 88999999999863
|
| >d1l7aa_ c.69.1.25 (A:) Cephalosporin C deacetylase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Cephalosporin C deacetylase species: Bacillus subtilis [TaxId: 1423]
Probab=99.92 E-value=2.5e-24 Score=171.66 Aligned_cols=234 Identities=15% Similarity=0.086 Sum_probs=142.0
Q ss_pred cceeEeCCCceEEEE---eCCCCCCCcEEEeccCCCC-CCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCc------
Q 020064 24 TGILKVSDIHTIYWE---QSGNPTGHPVVFLHGGPGG-GTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQ------ 93 (331)
Q Consensus 24 ~~~~~~~~g~~l~~~---~~g~~~~~~vl~~HG~~~~-~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~------ 93 (331)
.-++++.||.+|+.+ ..+....|+||++||++++ ..+...+..++++||.|+++|+||||.|........
T Consensus 58 ~v~~~~~dg~~i~~~l~~P~~~~~~P~vv~~HG~~~~~~~~~~~~~~la~~Gy~vi~~D~rG~G~s~~~~~~~~~~~~~~ 137 (318)
T d1l7aa_ 58 RLTYKSFGNARITGWYAVPDKEGPHPAIVKYHGYNASYDGEIHEMVNWALHGYATFGMLVRGQQRSEDTSISPHGHALGW 137 (318)
T ss_dssp EEEEEEGGGEEEEEEEEEESSCSCEEEEEEECCTTCCSGGGHHHHHHHHHTTCEEEEECCTTTSSSCCCCCCSSCCSSSS
T ss_pred EEEEECCCCcEEEEEEEecCCCCCceEEEEecCCCCCccchHHHHHHHHHCCCEEEEEeeCCCCCCCCCcccchhhhhcc
Confidence 345677788777643 3344445789999997655 445566777778999999999999999975442110
Q ss_pred ----------cchHHHHHHHHHHHHHh---C---CCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhH
Q 020064 94 ----------NTTWDLIDDIEKLRQHL---E---IPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWF 157 (331)
Q Consensus 94 ----------~~~~~~~~~~~~~~~~~---~---~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~ 157 (331)
........|....++.+ . ..++.++|+|+||..++..+...+. +.+++...+........
T Consensus 138 ~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~v~~~~i~~~G~s~Gg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--- 213 (318)
T d1l7aa_ 138 MTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDI-PKAAVADYPYLSNFERA--- 213 (318)
T ss_dssp TTTTTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHCSC-CSEEEEESCCSCCHHHH---
T ss_pred hhhchhhhhhhhhHHHHHHHHHHHHHHHhcccccCcceEEEeeccccHHHHHHhhcCcc-cceEEEeccccccHHHH---
Confidence 11222334443333332 2 2468999999999999999999874 66666555433211100
Q ss_pred hhcccccCChhhHHhhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHH
Q 020064 158 YEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAF 237 (331)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (331)
........... ...+..... . .... ...+
T Consensus 214 ----------------~~~~~~~~~~~-~~~~~~~~~-~-~~~~--------------------------------~~~~ 242 (318)
T d1l7aa_ 214 ----------------IDVALEQPYLE-INSFFRRNG-S-PETE--------------------------------VQAM 242 (318)
T ss_dssp ----------------HHHCCSTTTTH-HHHHHHHSC-C-HHHH--------------------------------HHHH
T ss_pred ----------------hhcccccccch-hhhhhhccc-c-cccc--------------------------------cccc
Confidence 00000000000 000000000 0 0000 0000
Q ss_pred hhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCC-CCcEEEecCCCCCCCcCCchhHH
Q 020064 238 ARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWP-EADFKVVADAGHSANEPGIAAEL 316 (331)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~~~~~~ 316 (331)
.... .......+.++ ++|+|+++|++|.++|++.+..+.+.++ ++++++++++||.. .+++
T Consensus 243 ~~~~------------~~~~~~~~~~i-~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~~~l~~~~~~gH~~-----~~~~ 304 (318)
T d1l7aa_ 243 KTLS------------YFDIMNLADRV-KVPVLMSIGLIDKVTPPSTVFAAYNHLETKKELKVYRYFGHEY-----IPAF 304 (318)
T ss_dssp HHHH------------TTCHHHHGGGC-CSCEEEEEETTCSSSCHHHHHHHHHHCCSSEEEEEETTCCSSC-----CHHH
T ss_pred cccc------------ccccccccccC-CCCEEEEEECCCCCcCHHHHHHHHHHcCCCcEEEEECCCCCCC-----cHHH
Confidence 0000 12233456788 5999999999999999999999999886 57899999999975 3456
Q ss_pred HHHHHHHHHhhhcC
Q 020064 317 VATNEKLKNLIKNG 330 (331)
Q Consensus 317 ~~~i~~fl~~~~~~ 330 (331)
.+.+.+|+++..+|
T Consensus 305 ~~~~~~fl~~~LkG 318 (318)
T d1l7aa_ 305 QTEKLAFFKQILKG 318 (318)
T ss_dssp HHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHhCCC
Confidence 77778888887765
|
| >d1ispa_ c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase A species: Bacillus subtilis [TaxId: 1423]
Probab=99.92 E-value=2.7e-25 Score=161.22 Aligned_cols=170 Identities=16% Similarity=0.031 Sum_probs=132.8
Q ss_pred CCcEEEeccCCCCCC-CCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCcEEEEEeChh
Q 020064 45 GHPVVFLHGGPGGGT-TPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWG 123 (331)
Q Consensus 45 ~~~vl~~HG~~~~~~-~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG~S~G 123 (331)
++||||+||++++.. |..+...+.++||.++.+|.+|++.+.... ..+.+++++++.++++.++.++++++|||||
T Consensus 2 ~~PVv~vHG~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~---~~~~~~l~~~i~~~~~~~~~~~v~lvGHSmG 78 (179)
T d1ispa_ 2 HNPVVMVHGIGGASFNFAGIKSYLVSQGWSRDKLYAVDFWDKTGTN---YNNGPVLSRFVQKVLDETGAKKVDIVAHSMG 78 (179)
T ss_dssp CCCEEEECCTTCCGGGGHHHHHHHHHTTCCGGGEEECCCSCTTCCH---HHHHHHHHHHHHHHHHHHCCSCEEEEEETHH
T ss_pred CCCEEEECCCCCCHHHHHHHHHHHHHcCCeEEEEecCCcccccccc---chhhhhHHHHHHHHHHhcCCceEEEEeecCc
Confidence 568999999776644 555667777899999999999999887554 4567788899999999999999999999999
Q ss_pred HHHHHHHHHhC--CCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhccccCCCchHHH
Q 020064 124 STLALAYSLAH--PDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQ 201 (331)
Q Consensus 124 g~~a~~~a~~~--p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (331)
|.++..++.++ |++|+++|+++++...... .
T Consensus 79 G~va~~~~~~~~~~~~V~~~V~l~~p~~g~~~---------------------~-------------------------- 111 (179)
T d1ispa_ 79 GANTLYYIKNLDGGNKVANVVTLGGANRLTTG---------------------K-------------------------- 111 (179)
T ss_dssp HHHHHHHHHHSSGGGTEEEEEEESCCGGGTCS---------------------B--------------------------
T ss_pred CHHHHHHHHHcCCchhhCEEEEECCCCCCchh---------------------h--------------------------
Confidence 99999999887 6789999999975421100 0
Q ss_pred HHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCCCccC
Q 020064 202 YAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCP 281 (331)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~ 281 (331)
.+....... .+|++.|+|+.|.+++
T Consensus 112 ------------------------------------------------------~l~~~~~~~-~~~~~~i~~~~D~~v~ 136 (179)
T d1ispa_ 112 ------------------------------------------------------ALPGTDPNQ-KILYTSIYSSADMIVM 136 (179)
T ss_dssp ------------------------------------------------------CCCCSCTTC-CCEEEEEEETTCSSSC
T ss_pred ------------------------------------------------------hcCCccccc-CceEEEEEecCCcccC
Confidence 000001112 5899999999999998
Q ss_pred CcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHh
Q 020064 282 MMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNL 326 (331)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 326 (331)
+..+ .+++++.+.+++.+|.....+ + ++.+.|.+||+.
T Consensus 137 ~~~~-----~l~~~~~~~~~~~~H~~l~~~-~-~v~~~i~~~L~~ 174 (179)
T d1ispa_ 137 NYLS-----RLDGARNVQIHGVGHIGLLYS-S-QVNSLIKEGLNG 174 (179)
T ss_dssp HHHH-----CCBTSEEEEESSCCTGGGGGC-H-HHHHHHHHHHTT
T ss_pred chhh-----cCCCceEEEECCCCchhhccC-H-HHHHHHHHHHhc
Confidence 7543 478899999999999877664 4 788999999864
|
| >d1xkta_ c.69.1.22 (A:) Fatty acid synthase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Fatty acid synthase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.91 E-value=9.7e-25 Score=171.03 Aligned_cols=108 Identities=14% Similarity=0.038 Sum_probs=80.2
Q ss_pred CCCceEEEEeCCCCCCCcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHH-HHHH
Q 020064 30 SDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIE-KLRQ 108 (331)
Q Consensus 30 ~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~-~~~~ 108 (331)
.+|.+|.+...++++++||||+||++++...|......+ +++|+++|+||+|.|. ++++++++.. ++.+
T Consensus 10 ~~~~~l~~l~~~~~~~~Pl~l~Hg~~gs~~~~~~l~~~L--~~~v~~~d~~g~~~~~--------~~~~~a~~~~~~~~~ 79 (286)
T d1xkta_ 10 PEGPTLMRLNSVQSSERPLFLVHPIEGSTTVFHSLASRL--SIPTYGLQCTRAAPLD--------SIHSLAAYYIDCIRQ 79 (286)
T ss_dssp TTSCSEEECCCCCCCSCCEEEECCTTCCCGGGHHHHHTC--SSCEEEECCCTTSCCS--------CHHHHHHHHHHHHHH
T ss_pred CCCCEEEEecCCCCCCCeEEEECCCCccHHHHHHHHHHc--CCeEEEEeCCCCCCCC--------CHHHHHHHHHHHHHH
Confidence 355578887777778889999999888766554433333 5899999999999875 4667777665 4556
Q ss_pred HhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccc
Q 020064 109 HLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIF 147 (331)
Q Consensus 109 ~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~ 147 (331)
..+.++++|+||||||.+|+.+|.++|+++.++++++..
T Consensus 80 ~~~~~~~~lvGhS~Gg~vA~~~A~~~p~~~~~v~~l~~~ 118 (286)
T d1xkta_ 80 VQPEGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNSL 118 (286)
T ss_dssp HCCSSCCEEEEETHHHHHHHHHHHHHHHC------CCEE
T ss_pred hcCCCceEEeecCCccHHHHHHHHHHHHcCCCceeEEEe
Confidence 667889999999999999999999999999988877653
|
| >d1ufoa_ c.69.1.27 (A:) Hypothetical protein TT1662 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein TT1662 domain: Hypothetical protein TT1662 species: Thermus thermophilus [TaxId: 274]
Probab=99.91 E-value=1.4e-23 Score=160.25 Aligned_cols=121 Identities=13% Similarity=0.092 Sum_probs=78.8
Q ss_pred ccceeEeCCCceEEEEeCCCCCCCcEEEeccCCCCC-CCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCc--cchHHH
Q 020064 23 STGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGG-TTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQ--NTTWDL 99 (331)
Q Consensus 23 ~~~~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~-~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~--~~~~~~ 99 (331)
+...+++.+. .+.+...++ .+|+||++||++++. .+..++..+++.||.|+++|+||||.|........ ......
T Consensus 4 ~~~~~~l~g~-~~~~~~p~~-~~~~vl~lHG~~~~~~~~~~~~~~la~~G~~V~~~D~~g~g~s~~~~~~~~~~~~~~~~ 81 (238)
T d1ufoa_ 4 RTERLTLAGL-SVLARIPEA-PKALLLALHGLQGSKEHILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPRYVEEV 81 (238)
T ss_dssp EEEEEEETTE-EEEEEEESS-CCEEEEEECCTTCCHHHHHHTSTTTGGGTEEEEECCCTTSTTSSCCCCCTTSTTHHHHH
T ss_pred EEEEEEECCE-EEEecCCCC-CCeEEEEeCCCCCCHHHHHHHHHHHHHCCCEEEEecCCCCCCCcccccccccchhhhhh
Confidence 3455666554 444444332 568899999977663 45667777888999999999999999975432111 111221
Q ss_pred -------HHHHHHHHH---HhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEec
Q 020064 100 -------IDDIEKLRQ---HLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRG 145 (331)
Q Consensus 100 -------~~~~~~~~~---~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~ 145 (331)
.+++..++. ..+..++.++|+|+||.+++.++..+|+....+.+++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~G~S~Gg~~a~~~~~~~p~~~~~~~~~~ 137 (238)
T d1ufoa_ 82 YRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIG 137 (238)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEETHHHHHHHHHHHTTCCCSCEEEESC
T ss_pred hhhHHhHHHHHHHHhhhccccCCceEEEEEecccHHHHHHHHhcCcchhheeeeee
Confidence 222222222 2344689999999999999999999986444444433
|
| >d2dsta1 c.69.1.39 (A:2-123) Hypothetical protein TTHA1544 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: TTHA1544-like domain: Hypothetical protein TTHA1544 species: Thermus thermophilus [TaxId: 274]
Probab=99.91 E-value=4.9e-24 Score=141.01 Aligned_cols=100 Identities=16% Similarity=0.212 Sum_probs=85.1
Q ss_pred cceeEeCCCceEEEEeCCCCCCCcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHH
Q 020064 24 TGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDI 103 (331)
Q Consensus 24 ~~~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~ 103 (331)
..++++++. +++|.+.| ++|||||+||.... | ...++++|+||++|+||||.|+.+ .++.+++++++
T Consensus 3 ~~~~~~~G~-~l~y~~~G--~G~pvlllHG~~~~--w----~~~L~~~yrvi~~DlpG~G~S~~p----~~s~~~~a~~i 69 (122)
T d2dsta1 3 AGYLHLYGL-NLVFDRVG--KGPPVLLVAEEASR--W----PEALPEGYAFYLLDLPGYGRTEGP----RMAPEELAHFV 69 (122)
T ss_dssp EEEEEETTE-EEEEEEEC--CSSEEEEESSSGGG--C----CSCCCTTSEEEEECCTTSTTCCCC----CCCHHHHHHHH
T ss_pred ceEEEECCE-EEEEEEEc--CCCcEEEEeccccc--c----cccccCCeEEEEEeccccCCCCCc----ccccchhHHHH
Confidence 457777655 99999999 79999999994321 2 234578999999999999999854 47899999999
Q ss_pred HHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCC
Q 020064 104 EKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPD 136 (331)
Q Consensus 104 ~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~ 136 (331)
.++++.+++++++++||||||.+++.+++..+.
T Consensus 70 ~~ll~~L~i~~~~viG~S~Gg~ia~~laa~~~~ 102 (122)
T d2dsta1 70 AGFAVMMNLGAPWVLLRGLGLALGPHLEALGLR 102 (122)
T ss_dssp HHHHHHTTCCSCEEEECGGGGGGHHHHHHTTCC
T ss_pred HHHHHHhCCCCcEEEEeCccHHHHHHHHhhccc
Confidence 999999999999999999999999999997653
|
| >d1jmkc_ c.69.1.22 (C:) Surfactin synthetase, SrfA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Surfactin synthetase, SrfA species: Bacillus subtilis [TaxId: 1423]
Probab=99.90 E-value=2.1e-24 Score=163.99 Aligned_cols=214 Identities=12% Similarity=0.035 Sum_probs=121.2
Q ss_pred eEEEEeCCCCCCCcEEEeccCCCCCCC-CCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHH-hC
Q 020064 34 TIYWEQSGNPTGHPVVFLHGGPGGGTT-PSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQH-LE 111 (331)
Q Consensus 34 ~l~~~~~g~~~~~~vl~~HG~~~~~~~-~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~-~~ 111 (331)
.+++...+ ++++|||+||++++... ..++..+ .+|.|+++|++|+|. .++++.+.+.. .+
T Consensus 8 ~~~~~~~~--~~~~l~~lhg~~g~~~~~~~la~~L--~~~~v~~~~~~g~~~--------------~a~~~~~~i~~~~~ 69 (230)
T d1jmkc_ 8 DVTIMNQD--QEQIIFAFPPVLGYGLMYQNLSSRL--PSYKLCAFDFIEEED--------------RLDRYADLIQKLQP 69 (230)
T ss_dssp TEEEESTT--CSEEEEEECCTTCCGGGGHHHHHHC--TTEEEEEECCCCSTT--------------HHHHHHHHHHHHCC
T ss_pred eEEeecCC--CCCeEEEEcCCCCCHHHHHHHHHHC--CCCEEeccCcCCHHH--------------HHHHHHHHHHHhCC
Confidence 45554444 68899999997766554 4455555 479999999999863 23344334444 35
Q ss_pred CCcEEEEEeChhHHHHHHHHHhCCCc---eeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHh
Q 020064 112 IPEWQVFGGSWGSTLALAYSLAHPDK---VTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDA 188 (331)
Q Consensus 112 ~~~v~lvG~S~Gg~~a~~~a~~~p~~---v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (331)
.++++|+||||||.+|+.+|.++|++ +..++.+++.......... ..........+...
T Consensus 70 ~~~~~lvGhS~GG~vA~~~A~~~~~~~~~v~~l~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~ 131 (230)
T d1jmkc_ 70 EGPLTLFGYSAGCSLAFEAAKKLEGQGRIVQRIIMVDSYKKQGVSDLD------------------GRTVESDVEALMNV 131 (230)
T ss_dssp SSCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCEECCCC--------------------------CCHHHHHHH
T ss_pred CCcEEEEeeccChHHHHHHHHhhhhhCccceeeecccccCccchhhhh------------------hhhhhhhhhhhhhc
Confidence 67899999999999999999887654 5555555543322110000 00000000000000
Q ss_pred hccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhcccccccc
Q 020064 189 YSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHIN 268 (331)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P 268 (331)
.............. .+......... ..........+ ++|
T Consensus 132 ~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~-----------~~~~~~~~~~i-~~p 170 (230)
T d1jmkc_ 132 NRDNEALNSEAVKH-----------------------------GLKQKTHAFYS-----------YYVNLISTGQV-KAD 170 (230)
T ss_dssp TTTCSGGGSHHHHH-----------------------------HHHHHHHHHHH-----------HHHHCCCCSCB-SSE
T ss_pred cccccccccHHHHH-----------------------------HHHHHHHHHHH-----------hhhcccccccc-cCc
Confidence 00000000000000 00000000000 01112244567 599
Q ss_pred EEEEecCCCCccCCcchHHHHHhC-CCCcEEEecCCCCCCCcCC-chhHHHHHHHHHHHh
Q 020064 269 ATIVQGRYDVCCPMMSAWDLHKAW-PEADFKVVADAGHSANEPG-IAAELVATNEKLKNL 326 (331)
Q Consensus 269 ~l~i~G~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~-~~~~~~~~i~~fl~~ 326 (331)
+++|+|++|..++.... .+.+.. ++.++++++ +||+.+.++ ..+++++.|.+||++
T Consensus 171 ~l~i~g~~D~~~~~~~~-~w~~~~~~~~~~~~i~-g~H~~ml~~~~~~~va~~I~~~L~~ 228 (230)
T d1jmkc_ 171 IDLLTSGADFDIPEWLA-SWEEATTGAYRMKRGF-GTHAEMLQGETLDRNAGILLEFLNT 228 (230)
T ss_dssp EEEEECSSCCCCCTTEE-CSGGGBSSCEEEEECS-SCGGGTTSHHHHHHHHHHHHHHHTC
T ss_pred ceeeeecCCcccchhHH-HHHHhccCCcEEEEEc-CCChhhcCCccHHHHHHHHHHHHhh
Confidence 99999999999986544 344444 467888888 699987764 248999999999975
|
| >d1vlqa_ c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Acetyl xylan esterase TM0077 species: Thermotoga maritima [TaxId: 2336]
Probab=99.90 E-value=1.2e-22 Score=162.07 Aligned_cols=230 Identities=17% Similarity=0.116 Sum_probs=139.2
Q ss_pred ceeEeCCCceEEEEeC---C-CCCCCcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCC--------
Q 020064 25 GILKVSDIHTIYWEQS---G-NPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLD-------- 92 (331)
Q Consensus 25 ~~~~~~~g~~l~~~~~---g-~~~~~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~-------- 92 (331)
-.+...||.+|+.... + +++.|+||++||++++..++.....++++||.|+++|+||+|.|.......
T Consensus 58 v~~~s~dG~~l~~~l~~P~~~~~~~P~Vv~~hG~~~~~~~~~~~~~~a~~G~~v~~~D~rG~G~s~~~~~~~~~~~~~~~ 137 (322)
T d1vlqa_ 58 VTFSGYRGQRIKGWLLVPKLEEEKLPCVVQYIGYNGGRGFPHDWLFWPSMGYICFVMDTRGQGSGWLKGDTPDYPEGPVD 137 (322)
T ss_dssp EEEECGGGCEEEEEEEEECCSCSSEEEEEECCCTTCCCCCGGGGCHHHHTTCEEEEECCTTCCCSSSCCCCCBCCSSSBC
T ss_pred EEEECCCCcEEEEEEEeccCCCCCccEEEEecCCCCCcCcHHHHHHHHhCCCEEEEeeccccCCCCCCcccccccccccc
Confidence 3456678888874433 2 223468999999877766666677788899999999999999986542111
Q ss_pred ---------------ccchHHHHHHHHHHHHHh------CCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchh
Q 020064 93 ---------------QNTTWDLIDDIEKLRQHL------EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRK 151 (331)
Q Consensus 93 ---------------~~~~~~~~~~~~~~~~~~------~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~ 151 (331)
.........|+...++.+ +..++.++|+|+||.+++.++...| ++++++...+.....
T Consensus 138 ~~~~~~~~~g~~~~~~~~~~~~~~d~~~a~~~~~~~~~~d~~ri~~~G~S~GG~~a~~~~~~~~-~~~a~v~~~~~~~~~ 216 (322)
T d1vlqa_ 138 PQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSK-KAKALLCDVPFLCHF 216 (322)
T ss_dssp CCCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCS-SCCEEEEESCCSCCH
T ss_pred ccccchhhhchhhhhhhhhHHHHHHHHHHHHHHHhcCCcCchhccccccccchHHHHHHHhcCC-CccEEEEeCCccccH
Confidence 011223344554444443 2247999999999999999888776 688888766543321
Q ss_pred hhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCcc
Q 020064 152 KEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDD 231 (331)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (331)
.... ........... ..+..... ....
T Consensus 217 ~~~~-------------------~~~~~~~~~~~-~~~~~~~~-------------------------~~~~-------- 243 (322)
T d1vlqa_ 217 RRAV-------------------QLVDTHPYAEI-TNFLKTHR-------------------------DKEE-------- 243 (322)
T ss_dssp HHHH-------------------HHCCCTTHHHH-HHHHHHCT-------------------------TCHH--------
T ss_pred HHHH-------------------hhccccchhhH-HhhhhcCc-------------------------chhh--------
Confidence 1100 00000000000 00000000 0000
Q ss_pred HHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCC-CCcEEEecCCCCCCCcC
Q 020064 232 IFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWP-EADFKVVADAGHSANEP 310 (331)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~ 310 (331)
.....+. ..+....+.++ ++|+|+++|++|.++|++.+..+.+.++ +++++++|++||....+
T Consensus 244 ~~~~~~~---------------~~d~~~~a~~i-~~P~Lv~~G~~D~~vp~~~~~~~~~~~~~~~~l~~~p~~~H~~~~~ 307 (322)
T d1vlqa_ 244 IVFRTLS---------------YFDGVNFAARA-KIPALFSVGLMDNICPPSTVFAAYNYYAGPKEIRIYPYNNHEGGGS 307 (322)
T ss_dssp HHHHHHH---------------TTCHHHHHTTC-CSCEEEEEETTCSSSCHHHHHHHHHHCCSSEEEEEETTCCTTTTHH
T ss_pred hHHHHhh---------------hhhHHHHHhcC-CCCEEEEEeCCCCCcCHHHHHHHHHHCCCCeEEEEECCCCCCCccc
Confidence 0000000 22344557778 5999999999999999999999988885 57899999999965332
Q ss_pred CchhHHHHHHHHHHHhhh
Q 020064 311 GIAAELVATNEKLKNLIK 328 (331)
Q Consensus 311 ~~~~~~~~~i~~fl~~~~ 328 (331)
. -.+...+||+++.
T Consensus 308 ~----~~~~~~~~l~~~l 321 (322)
T d1vlqa_ 308 F----QAVEQVKFLKKLF 321 (322)
T ss_dssp H----HHHHHHHHHHHHH
T ss_pred c----CHHHHHHHHHHHh
Confidence 2 2233456777654
|
| >d2bgra2 c.69.1.24 (A:509-766) Dipeptidyl peptidase IV/CD26, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl peptidase IV/CD26, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.89 E-value=4.1e-22 Score=153.72 Aligned_cols=230 Identities=10% Similarity=0.082 Sum_probs=141.0
Q ss_pred CCccceeEeCCCceEEEEeCCCC----CC--CcEEEeccCCCCCC---CC--C-cccccCCCCcEEEEecCCCCCCCCCC
Q 020064 21 PYSTGILKVSDIHTIYWEQSGNP----TG--HPVVFLHGGPGGGT---TP--S-NRRFFDPDFYRIILFDQRGAGKSTPH 88 (331)
Q Consensus 21 ~~~~~~~~~~~g~~l~~~~~g~~----~~--~~vl~~HG~~~~~~---~~--~-~~~~~~~~g~~vi~~D~~G~G~s~~~ 88 (331)
|.++-.+...+|.+++|...-++ ++ |+||++||++++.. .+ . ....+..+||.|+.+|+||.|.+...
T Consensus 2 ~~~~~~~~~~~~~~~~~~l~lP~~~~~~kk~P~iv~~HGGp~~~~~~~~~~~~~~~~~~a~~g~~V~~~d~rg~~~~~~~ 81 (258)
T d2bgra2 2 PSKKLDFIILNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVASFDGRGSGYQGDK 81 (258)
T ss_dssp CEEEEEEEEETTEEEEEEEEECTTCCTTSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEEEECCTTCSSSCHH
T ss_pred CceeEEEEEeCCcEEEEEEEECCCcCCCCCeeEEEEEcCCCCcccCCCccCcCHHHHHHhcCCcEEEeecccccCCcchH
Confidence 45666777778889999765332 23 68999999633311 11 1 12234578999999999998754421
Q ss_pred C---CCCccchHHHHHHHHHHHHHhC------CCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhh
Q 020064 89 A---CLDQNTTWDLIDDIEKLRQHLE------IPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYE 159 (331)
Q Consensus 89 ~---~~~~~~~~~~~~~~~~~~~~~~------~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~ 159 (331)
. ....... ...+++.++++.+. .+++.++|+|+||.+++.++..+|+.+...+..++.........
T Consensus 82 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~id~~~i~i~G~S~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 156 (258)
T d2bgra2 82 IMHAINRRLGT-FEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSRWEYYDS---- 156 (258)
T ss_dssp HHGGGTTCTTS-HHHHHHHHHHHHHTTSSSEEEEEEEEEEETHHHHHHHHHHTTTCSCCSEEEEESCCCCGGGSBH----
T ss_pred HHHhhhhhhhh-HHHHHHHHHHHHhhhhcccccccccccCcchhhcccccccccCCCcceEEEEeecccccccccc----
Confidence 0 0011111 12333334444432 23799999999999999999999998877776665433211000
Q ss_pred cccccCChhhHHhhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhh
Q 020064 160 GGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFAR 239 (331)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (331)
... ......... ....+...
T Consensus 157 ---------~~~----------------~~~~~~~~~----------------------~~~~~~~~------------- 176 (258)
T d2bgra2 157 ---------VYT----------------ERYMGLPTP----------------------EDNLDHYR------------- 176 (258)
T ss_dssp ---------HHH----------------HHHHCCCST----------------------TTTHHHHH-------------
T ss_pred ---------ccc----------------chhcccccc----------------------hhhHHHhh-------------
Confidence 000 000000000 00000000
Q ss_pred hhhhhhhccCCCCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhC----CCCcEEEecCCCCCCCcCCchhH
Q 020064 240 IENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAW----PEADFKVVADAGHSANEPGIAAE 315 (331)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~~~~~~~ 315 (331)
..+....+.+++++|+|+++|++|..+|+..++++.+.+ .+++++++|+++|.+......+.
T Consensus 177 --------------~~~~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~ 242 (258)
T d2bgra2 177 --------------NSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMWYTDEDHGIASSTAHQH 242 (258)
T ss_dssp --------------HSCSGGGGGGGGGSEEEEEEETTCSSSCTHHHHHHHHHHHHHTCCCEEEEETTCCTTCCSHHHHHH
T ss_pred --------------cccccccccccccCChheeeecCCCcccHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCccHHH
Confidence 111222344443589999999999999999888887765 46899999999998755445788
Q ss_pred HHHHHHHHHHhhhc
Q 020064 316 LVATNEKLKNLIKN 329 (331)
Q Consensus 316 ~~~~i~~fl~~~~~ 329 (331)
+.+.+.+||++..+
T Consensus 243 ~~~~i~~fl~~~l~ 256 (258)
T d2bgra2 243 IYTHMSHFIKQCFS 256 (258)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999998754
|
| >d2i3da1 c.69.1.36 (A:2-219) Hypothetical protein Atu1826 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: Hypothetical protein Atu1826 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.87 E-value=7.7e-21 Score=141.90 Aligned_cols=196 Identities=15% Similarity=0.127 Sum_probs=135.7
Q ss_pred ceeEeCCCceEEEEeC--CCCCCCcEEEeccCC---CCCCC---CCcccccCCCCcEEEEecCCCCCCCCCCCCCCccch
Q 020064 25 GILKVSDIHTIYWEQS--GNPTGHPVVFLHGGP---GGGTT---PSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTT 96 (331)
Q Consensus 25 ~~~~~~~g~~l~~~~~--g~~~~~~vl~~HG~~---~~~~~---~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~ 96 (331)
-.|+..+| +|..+-. ..+..+++|++||.+ ++... ...+..+.+.||.|+.+|+||.|.|....+......
T Consensus 3 v~i~g~~G-~Le~~~~~~~~~~~~~~l~~Hp~p~~GG~~~~~~~~~~a~~l~~~G~~~lrfn~RG~g~S~G~~~~~~~e~ 81 (218)
T d2i3da1 3 VIFNGPAG-RLEGRYQPSKEKSAPIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTLRFNFRSIGRSQGEFDHGAGEL 81 (218)
T ss_dssp EEEEETTE-EEEEEEECCSSTTCCEEEEECCCGGGTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTCCSCCCSSHHHH
T ss_pred EEEeCCCc-cEEEEEeCCCCCCCCEEEEECCCcCcCCcCCcHHHHHHHHHHHhcCeeEEEEecCccCCCccccccchhHH
Confidence 35677777 6764332 223456899999843 33222 335566777999999999999999987654322222
Q ss_pred HHHHHHHHHHHHHhC-CCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhc
Q 020064 97 WDLIDDIEKLRQHLE-IPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRD 175 (331)
Q Consensus 97 ~~~~~~~~~~~~~~~-~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (331)
++....+..+..... ..+++++|+|+||.+++.++.+.+ .+.+++++.++....
T Consensus 82 ~d~~aa~~~~~~~~~~~~~~~~~g~S~G~~~a~~~a~~~~-~~~~~~~~~~~~~~~------------------------ 136 (218)
T d2i3da1 82 SDAASALDWVQSLHPDSKSCWVAGYSFGAWIGMQLLMRRP-EIEGFMSIAPQPNTY------------------------ 136 (218)
T ss_dssp HHHHHHHHHHHHHCTTCCCEEEEEETHHHHHHHHHHHHCT-TEEEEEEESCCTTTS------------------------
T ss_pred HHHHHHHhhhhcccccccceeEEeeehHHHHHHHHHHhhc-cccceeecccccccc------------------------
Confidence 333333333333332 357999999999999999998876 477777777643210
Q ss_pred cCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcc
Q 020064 176 LIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDS 255 (331)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (331)
T Consensus 137 -------------------------------------------------------------------------------- 136 (218)
T d2i3da1 137 -------------------------------------------------------------------------------- 136 (218)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhhccccccccEEEEecCCCCccCCcchHHHHHhCC-----CCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhhhcC
Q 020064 256 FLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWP-----EADFKVVADAGHSANEPGIAAELVATNEKLKNLIKNG 330 (331)
Q Consensus 256 ~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~-----~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~~~ 330 (331)
-...+... .+|+|+++|++|.+++......+.+.+. +.++++++|++|++. .+ .+++.+.+.+||++..++
T Consensus 137 -~~~~~~~~-~~p~l~i~g~~D~~~~~~~~~~l~~~~~~~~~~~~~~~vi~gAdHfF~-g~-~~~l~~~v~~~l~~~l~~ 212 (218)
T d2i3da1 137 -DFSFLAPC-PSSGLIINGDADKVAPEKDVNGLVEKLKTQKGILITHRTLPGANHFFN-GK-VDELMGECEDYLDRRLNG 212 (218)
T ss_dssp -CCTTCTTC-CSCEEEEEETTCSSSCHHHHHHHHHHHTTSTTCCEEEEEETTCCTTCT-TC-HHHHHHHHHHHHHHHHTT
T ss_pred -chhhcccc-CCCceeeecccceecChHHHHHHHHHHhhccCCCccEEEeCCCCCCCc-CC-HHHHHHHHHHHHHHhcCC
Confidence 00123334 5999999999999999888887776652 347899999999986 33 789999999999876544
|
| >d1jfra_ c.69.1.16 (A:) Lipase {Streptomyces exfoliatus [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Lipase domain: Lipase species: Streptomyces exfoliatus [TaxId: 1905]
Probab=99.87 E-value=1.5e-21 Score=149.99 Aligned_cols=180 Identities=13% Similarity=0.141 Sum_probs=128.4
Q ss_pred eEEEEeC-CCCCCCcEEEeccCCCC-CCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHH--
Q 020064 34 TIYWEQS-GNPTGHPVVFLHGGPGG-GTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQH-- 109 (331)
Q Consensus 34 ~l~~~~~-g~~~~~~vl~~HG~~~~-~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~-- 109 (331)
+|+|-.. +...-|.||++||++++ ..+..+...+++.||.|+++|++|++.... ....++.+.+..+.+.
T Consensus 40 ~ly~P~~~~~g~~P~Vv~~HG~~g~~~~~~~~a~~lA~~Gy~V~~~d~~~~~~~~~------~~~~d~~~~~~~l~~~~~ 113 (260)
T d1jfra_ 40 TIYYPTSTADGTFGAVVISPGFTAYQSSIAWLGPRLASQGFVVFTIDTNTTLDQPD------SRGRQLLSALDYLTQRSS 113 (260)
T ss_dssp EEEEESCCTTCCEEEEEEECCTTCCGGGTTTHHHHHHTTTCEEEEECCSSTTCCHH------HHHHHHHHHHHHHHHTST
T ss_pred EEEEcCCCCCCCccEEEEECCCCCCHHHHHHHHHHHHhCCCEEEEEeeCCCcCCch------hhHHHHHHHHHHHHhhhh
Confidence 6777543 22223689999997665 445667888889999999999998765431 1223333334443332
Q ss_pred ----hCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhh
Q 020064 110 ----LEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCF 185 (331)
Q Consensus 110 ----~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (331)
++.++|.++|||+||.+++.++...+ ++.++|.+++....
T Consensus 114 ~~~~vD~~rI~v~G~S~GG~~al~aa~~~~-~~~A~v~~~~~~~~----------------------------------- 157 (260)
T d1jfra_ 114 VRTRVDATRLGVMGHSMGGGGSLEAAKSRT-SLKAAIPLTGWNTD----------------------------------- 157 (260)
T ss_dssp TGGGEEEEEEEEEEETHHHHHHHHHHHHCT-TCSEEEEESCCCSC-----------------------------------
T ss_pred hhccccccceEEEeccccchHHHHHHhhhc-cchhheeeeccccc-----------------------------------
Confidence 33468999999999999999999887 67788877663211
Q ss_pred HHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccc
Q 020064 186 VDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIR 265 (331)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 265 (331)
..+.++
T Consensus 158 -------------------------------------------------------------------------~~~~~~- 163 (260)
T d1jfra_ 158 -------------------------------------------------------------------------KTWPEL- 163 (260)
T ss_dssp -------------------------------------------------------------------------CCCTTC-
T ss_pred -------------------------------------------------------------------------cccccc-
Confidence 012345
Q ss_pred cccEEEEecCCCCccCCcc-hHHHHHhCC---CCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhhhcC
Q 020064 266 HINATIVQGRYDVCCPMMS-AWDLHKAWP---EADFKVVADAGHSANEPGIAAELVATNEKLKNLIKNG 330 (331)
Q Consensus 266 ~~P~l~i~G~~D~~~~~~~-~~~~~~~~~---~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~~~ 330 (331)
++|+|+++|++|.++|++. .+.+.+.++ ..++++++|++|+..... ...+.+.+..||++...+
T Consensus 164 ~~P~l~i~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~i~ga~H~~~~~~-~~~~~~~~~~wl~~~L~~ 231 (260)
T d1jfra_ 164 RTPTLVVGADGDTVAPVATHSKPFYESLPGSLDKAYLELRGASHFTPNTS-DTTIAKYSISWLKRFIDS 231 (260)
T ss_dssp CSCEEEEEETTCSSSCTTTTHHHHHHHSCTTSCEEEEEETTCCTTGGGSC-CHHHHHHHHHHHHHHHSC
T ss_pred ccceeEEecCCCCCCCHHHHHHHHHHhcccCCCEEEEEECCCccCCCCCC-hHHHHHHHHHHHHHHhcC
Confidence 6999999999999999865 555666664 346889999999987765 677888889999876554
|
| >d1qlwa_ c.69.1.15 (A:) A novel bacterial esterase {Alcaligenes sp. [TaxId: 512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: A novel bacterial esterase domain: A novel bacterial esterase species: Alcaligenes sp. [TaxId: 512]
Probab=99.86 E-value=9.3e-25 Score=174.18 Aligned_cols=103 Identities=17% Similarity=0.122 Sum_probs=73.8
Q ss_pred CCceEEEEeCCCCCCCcEEEeccCCCCCCCCC--------cccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHH
Q 020064 31 DIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPS--------NRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDD 102 (331)
Q Consensus 31 ~g~~l~~~~~g~~~~~~vl~~HG~~~~~~~~~--------~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~ 102 (331)
+...+.|....+++++||||+||++.+...|. ++..++++||+|+++|+||||.|.... ...+..++.++
T Consensus 44 ~~~~v~~~~p~~~~~~PvvllHG~~~~~~~w~~~~~~~~~~~~~~~~~Gy~V~~~D~~G~G~S~~~~--~~~~~~~~~~~ 121 (318)
T d1qlwa_ 44 DQMYVRYQIPQRAKRYPITLIHGCCLTGMTWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATDI--SAINAVKLGKA 121 (318)
T ss_dssp SCEEEEEEEETTCCSSCEEEECCTTCCGGGGSSCTTSCCCHHHHHHHTTCCEEEEECTTSTTSCCCC--HHHHHHHTTSS
T ss_pred ceEEEEEECCCCCCCCcEEEECCCCCCcCccccCcccchhHHHHHHhCCCEEEEecCCCCCCCCCcc--ccCCHHHHHHH
Confidence 33355666555556788999999887755443 345677899999999999999998654 23455566666
Q ss_pred HHHHHHHhCC--CcEEEEEeChhHHHHHHHHHhCC
Q 020064 103 IEKLRQHLEI--PEWQVFGGSWGSTLALAYSLAHP 135 (331)
Q Consensus 103 ~~~~~~~~~~--~~v~lvG~S~Gg~~a~~~a~~~p 135 (331)
+...++.+.. .++.++|||+||.++..++...+
T Consensus 122 ~~~~l~~~~~~~~~~~~~g~s~G~~~~~~~~~~~~ 156 (318)
T d1qlwa_ 122 PASSLPDLFAAGHEAAWAIFRFGPRYPDAFKDTQF 156 (318)
T ss_dssp CGGGSCCCBCCCHHHHHHHTTSSSBTTBCCTTCCS
T ss_pred HHHHHHHHhhcccccccccccchhHHHHHHhhhcC
Confidence 6666655532 46778999999998888776553
|
| >d1fj2a_ c.69.1.14 (A:) Acyl protein thioesterase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Acyl protein thioesterase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.86 E-value=1.9e-21 Score=146.71 Aligned_cols=179 Identities=17% Similarity=0.123 Sum_probs=117.8
Q ss_pred CCCcEEEeccCCCCCC-CCCcccccCCCCcEEEEecCCCCCC--------------CCCCCC--CCccchHHHHHHHHHH
Q 020064 44 TGHPVVFLHGGPGGGT-TPSNRRFFDPDFYRIILFDQRGAGK--------------STPHAC--LDQNTTWDLIDDIEKL 106 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~-~~~~~~~~~~~g~~vi~~D~~G~G~--------------s~~~~~--~~~~~~~~~~~~~~~~ 106 (331)
..++||++||++++.. +......+...++.+++++-|.+.. ...... .....+++..+.+..+
T Consensus 20 ~~~~VI~lHG~G~~~~~~~~~~~~l~~~~~~~v~p~Ap~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~i~~~~~~l~~l 99 (229)
T d1fj2a_ 20 ATAAVIFLHGLGDTGHGWAEAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPSWFDIIGLSPDSQEDESGIKQAAENIKAL 99 (229)
T ss_dssp CSEEEEEECCSSSCHHHHHHHHHTTCCTTEEEEECCCCEEEEGGGTTEEEECSSCBCCCSTTCCBCHHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCHHHHHHHHHHhcCCCCEEEeCCCCCCccccCCCcccccccccccccccchhhhHHHHHHHHHHHHH
Confidence 4568999999776643 3445566667899999988653210 000000 0111234444455555
Q ss_pred HHH-----hCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcch
Q 020064 107 RQH-----LEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENE 181 (331)
Q Consensus 107 ~~~-----~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (331)
++. ++.++++++|+|+||.+++.++.++|++++++|.+++....... ..
T Consensus 100 i~~~~~~~i~~~ri~l~GfS~Gg~~a~~~~~~~~~~~~gvi~~sg~lp~~~~-----------------------~~--- 153 (229)
T d1fj2a_ 100 IDQEVKNGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRAS-----------------------FP--- 153 (229)
T ss_dssp HHHHHHTTCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCCCTTGGG-----------------------SC---
T ss_pred hhhhhhcCCCccceeeeecccchHHHHHHHHhhccccCcccccccccccccc-----------------------cc---
Confidence 443 24568999999999999999999999999999999874321100 00
Q ss_pred hhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhc
Q 020064 182 RSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNI 261 (331)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 261 (331)
. .....
T Consensus 154 ------------------------------------------------------------------------~--~~~~~ 159 (229)
T d1fj2a_ 154 ------------------------------------------------------------------------Q--GPIGG 159 (229)
T ss_dssp ------------------------------------------------------------------------S--SCCCS
T ss_pred ------------------------------------------------------------------------c--ccccc
Confidence 0 00001
Q ss_pred cccccccEEEEecCCCCccCCcchHHHHHhC------CCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhhh
Q 020064 262 DNIRHINATIVQGRYDVCCPMMSAWDLHKAW------PEADFKVVADAGHSANEPGIAAELVATNEKLKNLIK 328 (331)
Q Consensus 262 ~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~------~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~ 328 (331)
.+. ++|++++||++|.++|.+.+++..+.+ .++++++++++||.+.. +.++.+.+||++..
T Consensus 160 ~~~-~~Pvli~hG~~D~~vp~~~~~~~~~~L~~~~~~~~v~~~~~~g~gH~i~~-----~~~~~~~~wL~~~L 226 (229)
T d1fj2a_ 160 ANR-DISILQCHGDCDPLVPLMFGSLTVEKLKTLVNPANVTFKTYEGMMHSSCQ-----QEMMDVKQFIDKLL 226 (229)
T ss_dssp TTT-TCCEEEEEETTCSSSCHHHHHHHHHHHHHHSCGGGEEEEEETTCCSSCCH-----HHHHHHHHHHHHHS
T ss_pred ccc-cCceeEEEcCCCCeeCHHHHHHHHHHHHhcCCCCceEEEEeCCCCCccCH-----HHHHHHHHHHHhHC
Confidence 112 589999999999999998887666554 24678899999997633 33677889998764
|
| >d1xfda2 c.69.1.24 (A:592-849) Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.85 E-value=6.3e-21 Score=146.96 Aligned_cols=222 Identities=12% Similarity=0.072 Sum_probs=127.2
Q ss_pred eeEeCCCceEEEEeCCC----CC--CCcEEEeccCCCCCC---CCC---cccccCCCCcEEEEecCCCCCCCCC------
Q 020064 26 ILKVSDIHTIYWEQSGN----PT--GHPVVFLHGGPGGGT---TPS---NRRFFDPDFYRIILFDQRGAGKSTP------ 87 (331)
Q Consensus 26 ~~~~~~g~~l~~~~~g~----~~--~~~vl~~HG~~~~~~---~~~---~~~~~~~~g~~vi~~D~~G~G~s~~------ 87 (331)
.+++ ||.+|..+..-+ ++ -|+||++||++++.. .+. ....++++||.|+++|+||.+.+..
T Consensus 7 ~i~~-dg~~l~~~l~~P~~~~~~~k~Pviv~~HGGp~~~~~~~~~~~~~~~~~la~~G~~vv~~d~rGs~~~g~~~~~~~ 85 (258)
T d1xfda2 7 DIEI-DDYNLPMQILKPATFTDTTHYPLLLVVDGTPGSQSVAEKFEVSWETVMVSSHGAVVVKCDGRGSGFQGTKLLHEV 85 (258)
T ss_dssp CEEE-TTEEECCBEEBCSSCCSSSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEECCCCTTCSSSHHHHHHTT
T ss_pred EEee-CCeEEEEEEEECCCcCCCCceeEEEEEcCCccccCcCCCcCcchHHHHHhcCCcEEEEeccccccccchhHhhhh
Confidence 3444 666776543322 12 268999999754322 121 1234667899999999998553321
Q ss_pred CCCCCccchHHHHHHHHHHHHHhC--CCcEEEEEeChhHHHHHHHHHhCCC----ceeeEEEeccccchhhhhhhHhhcc
Q 020064 88 HACLDQNTTWDLIDDIEKLRQHLE--IPEWQVFGGSWGSTLALAYSLAHPD----KVTGLVLRGIFLLRKKEIDWFYEGG 161 (331)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~lvG~S~Gg~~a~~~a~~~p~----~v~~li~~~~~~~~~~~~~~~~~~~ 161 (331)
..........+..+.+..+++... .++|.++|+|+||.+++.++...++ .+...+..++.........
T Consensus 86 ~~~~g~~~~~d~~~~i~~l~~~~~id~~ri~v~G~S~GG~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 159 (258)
T d1xfda2 86 RRRLGLLEEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCGSALSPITDFKLYAS------ 159 (258)
T ss_dssp TTCTTTHHHHHHHHHHHHHHSSSSEEEEEEEEEEETHHHHHHHHCCCCSSSTTCCCCSEEEEESCCCCTTSSBH------
T ss_pred hccchhHHHHHHHHhhhhhcccccccccceeccccCchHHHHHHHHhcCCcccceeeeeeeccccceeeecccc------
Confidence 111011223334444444444333 3579999999999999988877654 3444444444322110000
Q ss_pred cccCChhhHHhhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhh
Q 020064 162 AAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIE 241 (331)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (331)
........ .....+....
T Consensus 160 ----------------------~~~~~~~~-------------------------~~~~~~~~~~--------------- 177 (258)
T d1xfda2 160 ----------------------AFSERYLG-------------------------LHGLDNRAYE--------------- 177 (258)
T ss_dssp ----------------------HHHHHHHC-------------------------CCSSCCSSTT---------------
T ss_pred ----------------------cccccccc-------------------------ccccchHHhh---------------
Confidence 00000000 0000000000
Q ss_pred hhhhhccCCCCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhC----CCCcEEEecCCCCCCCcCCchhHHH
Q 020064 242 NHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAW----PEADFKVVADAGHSANEPGIAAELV 317 (331)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~~~~~~~~~ 317 (331)
.......+.++.++|+|+++|+.|..+|++.+.++.+.+ .+.+++++|+++|.+........+.
T Consensus 178 ------------~~s~~~~~~~~~~~p~Li~hG~~D~~vp~~~s~~~~~~l~~~~~~~~~~~~p~~~H~~~~~~~~~~~~ 245 (258)
T d1xfda2 178 ------------MTKVAHRVSALEEQQFLIIHPTADEKIHFQHTAELITQLIRGKANYSLQIYPDESHYFTSSSLKQHLY 245 (258)
T ss_dssp ------------TTCTHHHHTSCCSCEEEEEEETTCSSSCHHHHHHHHHHHHHTTCCCEEEEETTCCSSCCCHHHHHHHH
T ss_pred ------------ccchhhhhhhhhcccccccccCCCCCcCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCcCHHHHH
Confidence 111222333332589999999999999998888777655 4678999999999876554477788
Q ss_pred HHHHHHHHhhh
Q 020064 318 ATNEKLKNLIK 328 (331)
Q Consensus 318 ~~i~~fl~~~~ 328 (331)
+.+.+|+++..
T Consensus 246 ~~~~~f~~~~~ 256 (258)
T d1xfda2 246 RSIINFFVECF 256 (258)
T ss_dssp HHHHHHHTTTT
T ss_pred HHHHHHHHHhh
Confidence 99999998764
|
| >d2h1ia1 c.69.1.14 (A:1-202) Carboxylesterase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Bacillus cereus [TaxId: 1396]
Probab=99.84 E-value=9.6e-21 Score=140.35 Aligned_cols=176 Identities=13% Similarity=0.120 Sum_probs=118.1
Q ss_pred EeCCCCCCCcEEEeccCCCCCCCC-CcccccCCCCcEEEEecCCCCCCCCCCC----CCCccchH-------HHHHHHHH
Q 020064 38 EQSGNPTGHPVVFLHGGPGGGTTP-SNRRFFDPDFYRIILFDQRGAGKSTPHA----CLDQNTTW-------DLIDDIEK 105 (331)
Q Consensus 38 ~~~g~~~~~~vl~~HG~~~~~~~~-~~~~~~~~~g~~vi~~D~~G~G~s~~~~----~~~~~~~~-------~~~~~~~~ 105 (331)
....+++.|+||++||++++...+ .+.. .+.+++.|++++.+..+...... .....+.+ .+.+.+..
T Consensus 7 ~~~~~~~~P~vi~lHG~g~~~~~~~~~~~-~l~~~~~vv~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 85 (202)
T d2h1ia1 7 QKGKDTSKPVLLLLHGTGGNELDLLPLAE-IVDSEASVLSVRGNVLENGMPRFFRRLAEGIFDEEDLIFRTKELNEFLDE 85 (202)
T ss_dssp ECCSCTTSCEEEEECCTTCCTTTTHHHHH-HHHTTSCEEEECCSEEETTEEESSCEEETTEECHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCEEEEECCCCCCHHHHHHHHH-HhccCCceeeecccccCCCCccccccCCCCCCchHHHHHHHHHHHHHHHH
Confidence 344445678999999977665543 3344 34578999999865433221110 00111222 23333344
Q ss_pred HHHHhC--CCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhh
Q 020064 106 LRQHLE--IPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERS 183 (331)
Q Consensus 106 ~~~~~~--~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (331)
+.+..+ ..++.++|+|+||.+++.++..+|+++.+++++++.....
T Consensus 86 ~~~~~~~d~~~i~~~G~S~Gg~~a~~la~~~~~~~~~~~~~~~~~~~~-------------------------------- 133 (202)
T d2h1ia1 86 AAKEYKFDRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPMVPRR-------------------------------- 133 (202)
T ss_dssp HHHHTTCCTTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCS--------------------------------
T ss_pred HHHhccccccceeeecccccchHHHHHHHhccccccceeeecCCCCcc--------------------------------
Confidence 445544 4589999999999999999999999999999988743210
Q ss_pred hhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccc
Q 020064 184 CFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDN 263 (331)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 263 (331)
.......
T Consensus 134 -------------------------------------------------------------------------~~~~~~~ 140 (202)
T d2h1ia1 134 -------------------------------------------------------------------------GMQLANL 140 (202)
T ss_dssp -------------------------------------------------------------------------SCCCCCC
T ss_pred -------------------------------------------------------------------------ccccccc
Confidence 0001122
Q ss_pred cccccEEEEecCCCCccCCcchHHHHHhCC----CCcEEEecCCCCCCCcCCchhHHHHHHHHHHHh
Q 020064 264 IRHINATIVQGRYDVCCPMMSAWDLHKAWP----EADFKVVADAGHSANEPGIAAELVATNEKLKNL 326 (331)
Q Consensus 264 i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 326 (331)
. ..|+++++|++|+++|++.++++.+.+. +.+++++|+ ||.+. .+.++.+.+||++
T Consensus 141 ~-~~~~~i~~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~g-gH~~~-----~~~~~~~~~wl~k 200 (202)
T d2h1ia1 141 A-GKSVFIAAGTNDPICSSAESEELKVLLENANANVTMHWENR-GHQLT-----MGEVEKAKEWYDK 200 (202)
T ss_dssp T-TCEEEEEEESSCSSSCHHHHHHHHHHHHTTTCEEEEEEESS-TTSCC-----HHHHHHHHHHHHH
T ss_pred c-cchhhcccccCCCccCHHHHHHHHHHHHHCCCCEEEEEECC-CCcCC-----HHHHHHHHHHHHH
Confidence 3 5899999999999999999888887763 467888884 89763 3447788899876
|
| >d1vkha_ c.69.1.32 (A:) Putative serine hydrolase Ydr428c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Putative serine hydrolase Ydr428c domain: Putative serine hydrolase Ydr428c species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.83 E-value=1.7e-20 Score=145.10 Aligned_cols=99 Identities=18% Similarity=0.262 Sum_probs=74.7
Q ss_pred eEEEEeCCCCCCCcEEEeccCCCC---CCC---C----CcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHH
Q 020064 34 TIYWEQSGNPTGHPVVFLHGGPGG---GTT---P----SNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDI 103 (331)
Q Consensus 34 ~l~~~~~g~~~~~~vl~~HG~~~~---~~~---~----~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~ 103 (331)
++.+...++.+.|+||++|||+.. ... . .+...+.+.||.|+++|+|..+... ....+++..+.+
T Consensus 20 ~~~~~~~~~~~~~~vv~iHGGg~~~~~~~~~~~~~~~~~l~~~~~~~g~~v~~~dYrl~p~~~-----~~~~~~d~~~~~ 94 (263)
T d1vkha_ 20 TLTFQEISQNTREAVIYIHGGAWNDPENTPNDFNQLANTIKSMDTESTVCQYSIEYRLSPEIT-----NPRNLYDAVSNI 94 (263)
T ss_dssp CEEEECCCTTCCEEEEEECCSTTTCTTCCGGGGHHHHHHHHHHCTTCCEEEEEECCCCTTTSC-----TTHHHHHHHHHH
T ss_pred eEEeccCCCCCCcEEEEECCCCccCCCCCcchHHHHHHHHHHHHHhCCeEEEEeccccCcchh-----hhHHHHhhhhhh
Confidence 566777666678899999996421 111 1 1335566789999999999765443 234677888888
Q ss_pred HHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCc
Q 020064 104 EKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDK 137 (331)
Q Consensus 104 ~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~ 137 (331)
..+++..+.++++|+|||+||.+++.++...++.
T Consensus 95 ~~l~~~~~~~~i~l~G~S~Gg~lal~~a~~~~~~ 128 (263)
T d1vkha_ 95 TRLVKEKGLTNINMVGHSVGATFIWQILAALKDP 128 (263)
T ss_dssp HHHHHHHTCCCEEEEEETHHHHHHHHHHTGGGSC
T ss_pred hcccccccccceeeeccCcHHHHHHHHHHhccCc
Confidence 8888999999999999999999999999877653
|
| >d1dina_ c.69.1.9 (A:) Dienelactone hydrolase {Pseudomonas sp., B13 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Dienelactone hydrolase domain: Dienelactone hydrolase species: Pseudomonas sp., B13 [TaxId: 306]
Probab=99.83 E-value=2.8e-20 Score=140.61 Aligned_cols=198 Identities=15% Similarity=0.022 Sum_probs=129.9
Q ss_pred ccceeEeCCCceEEEEeCCC--CCCCcEEEeccCCC-CCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCC-------
Q 020064 23 STGILKVSDIHTIYWEQSGN--PTGHPVVFLHGGPG-GGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLD------- 92 (331)
Q Consensus 23 ~~~~~~~~~g~~l~~~~~g~--~~~~~vl~~HG~~~-~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~------- 92 (331)
+.-.++..||.++.....-+ .+.|.||++|+..+ .......+..+++.||.|+++|+.+.+.........
T Consensus 4 e~v~~~~~dg~~~~a~~~~P~~~~~P~vl~~h~~~G~~~~~~~~a~~lA~~Gy~vl~pd~~~~~~~~~~~~~~~~~~~~~ 83 (233)
T d1dina_ 4 EGISIQSYDGHTFGALVGSPAKAPAPVIVIAQEIFGVNAFMRETVSWLVDQGYAAVCPDLYARQAPGTALDPQDERQREQ 83 (233)
T ss_dssp TTCCEECTTSCEECEEEECCSSSSEEEEEEECCTTBSCHHHHHHHHHHHHTTCEEEEECGGGGTSTTCBCCTTSHHHHHH
T ss_pred eEEEEEcCCCCEEEEEEECCCCCCceEEEEeCCCCCCCHHHHHHHHHHHhcCCcceeeeeccCCCcCcccChHHHHHHHH
Confidence 34457778887776544332 24568999997443 333445567777899999999997765544322111
Q ss_pred ------ccchHHHHHHHHHHHHHhC-----CCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcc
Q 020064 93 ------QNTTWDLIDDIEKLRQHLE-----IPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGG 161 (331)
Q Consensus 93 ------~~~~~~~~~~~~~~~~~~~-----~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~ 161 (331)
..+.+....|+...++.+. .++|.++|+|+||.+++.++...+ +.+.+...+...
T Consensus 84 ~~~~~~~~~~~~~~~d~~aa~~~l~~~~~~~~~i~~~G~s~Gg~~a~~~a~~~~--~~~~~~~~~~~~------------ 149 (233)
T d1dina_ 84 AYKLWQAFDMEAGVGDLEAAIRYARHQPYSNGKVGLVGYCLGGALAFLVAAKGY--VDRAVGYYGVGL------------ 149 (233)
T ss_dssp HHHHHHTCCHHHHHHHHHHHHHHHHTSTTEEEEEEEEEETHHHHHHHHHHHHTC--SSEEEEESCSCG------------
T ss_pred HHHHhhhhhhHHHHHHHHHHHHHHHhCCCCCCceEEEEecccccceeecccccc--cceecccccccc------------
Confidence 1233445566666666552 237999999999999999887643 444443322110
Q ss_pred cccCChhhHHhhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhh
Q 020064 162 AAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIE 241 (331)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (331)
T Consensus 150 -------------------------------------------------------------------------------- 149 (233)
T d1dina_ 150 -------------------------------------------------------------------------------- 149 (233)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhhccCCCCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhC---CCCcEEEecCCCCCCCcCC-------
Q 020064 242 NHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAW---PEADFKVVADAGHSANEPG------- 311 (331)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~~~~------- 311 (331)
....+.+.++ ++|+|+++|++|+.+|.+..+.+.+.+ ++.+++++||++|.+..+.
T Consensus 150 -------------~~~~~~~~~i-~~Pvl~~~G~~D~~vp~e~~~~~~~~~~~~~~~~~~~y~ga~HgF~~~~~~~y~~~ 215 (233)
T d1dina_ 150 -------------EKQLNKVPEV-KHPALFHMGGQDHFVPAPSRQLITEGFGANPLLQVHWYEEAGHSFARTSSSGYVAS 215 (233)
T ss_dssp -------------GGGGGGGGGC-CSCEEEEEETTCTTSCHHHHHHHHHHHTTCTTEEEEEETTCCTTTTCTTSTTCCHH
T ss_pred -------------ccchhhhhcc-CCcceeeecccccCCCHHHHHHHHHHHhcCCCEEEEEECCCCcCCCCCCCccCCHH
Confidence 0011234467 599999999999999988887776654 3568899999999875321
Q ss_pred chhHHHHHHHHHHHhhh
Q 020064 312 IAAELVATNEKLKNLIK 328 (331)
Q Consensus 312 ~~~~~~~~i~~fl~~~~ 328 (331)
..++..+.+.+||.++.
T Consensus 216 aa~~a~~r~~~ffa~~~ 232 (233)
T d1dina_ 216 AAALANERTLDFLAPLQ 232 (233)
T ss_dssp HHHHHHHHHHHHHGGGC
T ss_pred HHHHHHHHHHHHHHcCc
Confidence 12344677888998774
|
| >d3b5ea1 c.69.1.14 (A:7-215) Uncharacterized protein Mll8374 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Mll8374 species: Mesorhizobium loti [TaxId: 381]
Probab=99.83 E-value=5.8e-20 Score=136.53 Aligned_cols=108 Identities=16% Similarity=0.071 Sum_probs=69.8
Q ss_pred CCCCCCCcEEEeccCCCCCCCC-CcccccCCCCcEEEEecCCCC--C--CCCCCCCCCccch-------HHHHHHHHHHH
Q 020064 40 SGNPTGHPVVFLHGGPGGGTTP-SNRRFFDPDFYRIILFDQRGA--G--KSTPHACLDQNTT-------WDLIDDIEKLR 107 (331)
Q Consensus 40 ~g~~~~~~vl~~HG~~~~~~~~-~~~~~~~~~g~~vi~~D~~G~--G--~s~~~~~~~~~~~-------~~~~~~~~~~~ 107 (331)
.|.++.|+||++||++++...+ .+...+ ..++.+++++.+.. | ...........+. +.+.+.|..+.
T Consensus 18 ~~~~~~p~vv~lHG~g~~~~~~~~l~~~l-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 96 (209)
T d3b5ea1 18 AGKESRECLFLLHGSGVDETTLVPLARRI-APTATLVAARGRIPQEDGFRWFERIDPTRFEQKSILAETAAFAAFTNEAA 96 (209)
T ss_dssp TTSSCCCEEEEECCTTBCTTTTHHHHHHH-CTTSEEEEECCSEEETTEEESSCEEETTEECHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEEcCCCCCHHHHHHHHHHh-ccCcEEEeeccCcCcccCccccccCCccccchhhHHHHHHHHHHHHHHHH
Confidence 3555678999999977665443 344444 46889999876521 1 0000000011222 22333344444
Q ss_pred HHhC--CCcEEEEEeChhHHHHHHHHHhCCCceeeEEEecccc
Q 020064 108 QHLE--IPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFL 148 (331)
Q Consensus 108 ~~~~--~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~ 148 (331)
++.+ .++++++|||+||.+++.++.++|+++++++++++..
T Consensus 97 ~~~~id~~ri~l~G~S~Gg~~a~~~a~~~p~~~~~~v~~~g~~ 139 (209)
T d3b5ea1 97 KRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMP 139 (209)
T ss_dssp HHHTCCGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCCC
T ss_pred HHhCcccCCEEEEeeCChHHHHHHHHHhCCCcceEEEEeCCcc
Confidence 5544 4589999999999999999999999999999998743
|
| >d2r8ba1 c.69.1.14 (A:44-246) Uncharacterized protein Atu2452 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Atu2452 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.83 E-value=1.2e-20 Score=139.87 Aligned_cols=182 Identities=13% Similarity=0.053 Sum_probs=124.0
Q ss_pred CCceEEEEeCCCCCCCcEEEeccCCCCCC-CCCcccccCCCCcEEEEecCCCCCCCCCCC----CCCccch---HHHHHH
Q 020064 31 DIHTIYWEQSGNPTGHPVVFLHGGPGGGT-TPSNRRFFDPDFYRIILFDQRGAGKSTPHA----CLDQNTT---WDLIDD 102 (331)
Q Consensus 31 ~g~~l~~~~~g~~~~~~vl~~HG~~~~~~-~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~----~~~~~~~---~~~~~~ 102 (331)
|+ -++....|.++.|+||++||++++.. +......+ ..++.|++++.+..+...... .....+. .+..+.
T Consensus 4 ~~-y~~~~~~~~~~~P~vi~lHG~G~~~~~~~~~~~~l-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (203)
T d2r8ba1 4 DS-YFHKSRAGVAGAPLFVLLHGTGGDENQFFDFGARL-LPQATILSPVGDVSEHGAARFFRRTGEGVYDMVDLERATGK 81 (203)
T ss_dssp TS-SCEEEECCCTTSCEEEEECCTTCCHHHHHHHHHHH-STTSEEEEECCSEEETTEEESSCBCGGGCBCHHHHHHHHHH
T ss_pred ce-eEeecCCCCCCCCEEEEECCCCCCHHHHHHHHHHh-ccCCeEEEeccccccccccccccccCccccchhHHHHHHHH
Confidence 44 35556667778899999999766644 34444444 468889999877544332111 0011122 233333
Q ss_pred HHHHH----HHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCC
Q 020064 103 IEKLR----QHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIP 178 (331)
Q Consensus 103 ~~~~~----~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (331)
+..++ ...+.++++++|+|+||.+++.++..+|+.+.++++.++......
T Consensus 82 ~~~~l~~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~~~~~~~~-------------------------- 135 (203)
T d2r8ba1 82 MADFIKANREHYQAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPFEP-------------------------- 135 (203)
T ss_dssp HHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCCSCC--------------------------
T ss_pred HHHHHHHhhhcCCCceEEEEEecCHHHHHHHHHHhhhhcccceeeecccccccc--------------------------
Confidence 33333 446778999999999999999999999999999999987532100
Q ss_pred cchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhh
Q 020064 179 ENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLL 258 (331)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (331)
.
T Consensus 136 -------------------------------------------------------------------------------~ 136 (203)
T d2r8ba1 136 -------------------------------------------------------------------------------K 136 (203)
T ss_dssp -------------------------------------------------------------------------------C
T ss_pred -------------------------------------------------------------------------------c
Confidence 0
Q ss_pred hhccccccccEEEEecCCCCccCCcchHHHHHhCC----CCcEEEecCCCCCCCcCCchhHHHHHHHHHHHh
Q 020064 259 DNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWP----EADFKVVADAGHSANEPGIAAELVATNEKLKNL 326 (331)
Q Consensus 259 ~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 326 (331)
...... ..|++++||++|+++|++.++++.+.+. +++++++++ ||.+.. +..+.+.+||.+
T Consensus 137 ~~~~~~-~~~~~i~hG~~D~~vp~~~~~~~~~~L~~~g~~v~~~~~~g-gH~~~~-----~~~~~~~~wl~~ 201 (203)
T d2r8ba1 137 ISPAKP-TRRVLITAGERDPICPVQLTKALEESLKAQGGTVETVWHPG-GHEIRS-----GEIDAVRGFLAA 201 (203)
T ss_dssp CCCCCT-TCEEEEEEETTCTTSCHHHHHHHHHHHHHHSSEEEEEEESS-CSSCCH-----HHHHHHHHHHGG
T ss_pred cccccc-cchhhccccCCCCcccHHHHHHHHHHHHHCCCCEEEEEECC-CCcCCH-----HHHHHHHHHHHh
Confidence 001122 5899999999999999999988888763 467888985 898632 346778889865
|
| >d1mo2a_ c.69.1.22 (A:) Erythromycin polyketide synthase {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Erythromycin polyketide synthase species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.82 E-value=4.4e-20 Score=141.19 Aligned_cols=102 Identities=15% Similarity=0.091 Sum_probs=78.9
Q ss_pred CCCcEEEeccC--CCCCCC-CCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHH-HHhCCCcEEEEE
Q 020064 44 TGHPVVFLHGG--PGGGTT-PSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLR-QHLEIPEWQVFG 119 (331)
Q Consensus 44 ~~~~vl~~HG~--~~~~~~-~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~lvG 119 (331)
++|+++|+||. +++... ..++..+ ...+.|+++|+||+|.++.. ..+++++++++.+.+ +..+..+++|+|
T Consensus 41 ~~~~l~c~~~~~~gg~~~~y~~La~~L-~~~~~V~al~~pG~~~~e~~----~~s~~~~a~~~~~~i~~~~~~~P~~L~G 115 (255)
T d1mo2a_ 41 GEVTVICCAGTAAISGPHEFTRLAGAL-RGIAPVRAVPQPGYEEGEPL----PSSMAAVAAVQADAVIRTQGDKPFVVAG 115 (255)
T ss_dssp CSSEEEEECCCSSSCSGGGGHHHHHHH-TTTCCEEEECCTTSSTTCCE----ESSHHHHHHHHHHHHHHTTSSSCEEEEE
T ss_pred CCCeEEEECCCCCCCCHHHHHHHHHhc-CCCceEEEEeCCCcCCCCCC----CCCHHHHHHHHHHHHHHhCCCCCEEEEE
Confidence 67889999983 334333 3444544 56789999999999988644 357899999887655 556678999999
Q ss_pred eChhHHHHHHHHHhC---CCceeeEEEeccccch
Q 020064 120 GSWGSTLALAYSLAH---PDKVTGLVLRGIFLLR 150 (331)
Q Consensus 120 ~S~Gg~~a~~~a~~~---p~~v~~li~~~~~~~~ 150 (331)
|||||.+|+.+|.+. ..++.+++++++..+.
T Consensus 116 hS~Gg~vA~e~A~~l~~~g~~v~~lvlld~~~p~ 149 (255)
T d1mo2a_ 116 HSAGALMAYALATELLDRGHPPRGVVLIDVYPPG 149 (255)
T ss_dssp CSTTHHHHHHHHHHHHHHTCCCSEEEEEECSCSS
T ss_pred eCCcHHHHHHHHHhhHhcCCCccEEEEECCCCCC
Confidence 999999999999875 4569999999986543
|
| >d1cvla_ c.69.1.18 (A:) Lipase {Chromobacterium viscosum [TaxId: 42739]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Chromobacterium viscosum [TaxId: 42739]
Probab=99.78 E-value=3.5e-19 Score=140.63 Aligned_cols=103 Identities=14% Similarity=0.114 Sum_probs=87.4
Q ss_pred CCCcEEEeccCCCCCC-------CCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCcEE
Q 020064 44 TGHPVVFLHGGPGGGT-------TPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQ 116 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~-------~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 116 (331)
.+.||||+||+.++.. |......|.++||+|+++|+||+|.|+... ...+++++++.++++.++.++++
T Consensus 7 ~k~PvvlvHG~~g~~~~~~~~~~~~~~~~~L~~~G~~V~~~~~~g~g~s~~~~----~~~~~l~~~i~~~~~~~~~~~v~ 82 (319)
T d1cvla_ 7 TRYPVILVHGLAGTDKFANVVDYWYGIQSDLQSHGAKVYVANLSGFQSDDGPN----GRGEQLLAYVKQVLAATGATKVN 82 (319)
T ss_dssp CSSCEEEECCTTBSSEETTTEESSTTHHHHHHHTTCCEEECCCBCSSCTTSTT----SHHHHHHHHHHHHHHHHCCSCEE
T ss_pred CCCCEEEECCCCCCcchhhhhhhHHHHHHHHHHCCCEEEEecCCCCCCCCCCc----ccHHHHHHHHHHHHHHhCCCCEE
Confidence 4557999999766543 334556666789999999999999987553 46788999999999999999999
Q ss_pred EEEeChhHHHHHHHHHhCCCceeeEEEeccccch
Q 020064 117 VFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLR 150 (331)
Q Consensus 117 lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~ 150 (331)
+|||||||.++..++..+|++++++|+++++...
T Consensus 83 lvGhS~GG~~~~~~~~~~p~~v~~vv~i~~p~~g 116 (319)
T d1cvla_ 83 LIGHSQGGLTSRYVAAVAPQLVASVTTIGTPHRG 116 (319)
T ss_dssp EEEETTHHHHHHHHHHHCGGGEEEEEEESCCTTC
T ss_pred EEeccccHHHHHHHHHHCccccceEEEECCCCCC
Confidence 9999999999999999999999999999986543
|
| >d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida antarctica), form b [TaxId: 34362]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Yeast (Candida antarctica), form b [TaxId: 34362]
Probab=99.78 E-value=2.2e-18 Score=133.48 Aligned_cols=101 Identities=16% Similarity=0.025 Sum_probs=84.4
Q ss_pred CCCcEEEeccCCCCCC---CCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCcEEEEEe
Q 020064 44 TGHPVVFLHGGPGGGT---TPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGG 120 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~---~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG~ 120 (331)
.++||||+||++.+.. +..+...+.+.||+|+.+|+||+|.++. ..+.+++++.+..+++..+.++|.||||
T Consensus 30 ~~~PVvlvHG~~~~~~~~~~~~~~~~L~~~Gy~v~~~d~~g~g~~d~-----~~sae~la~~i~~v~~~~g~~kV~lVGh 104 (317)
T d1tcaa_ 30 VSKPILLVPGTGTTGPQSFDSNWIPLSTQLGYTPCWISPPPFMLNDT-----QVNTEYMVNAITALYAGSGNNKLPVLTW 104 (317)
T ss_dssp CSSEEEEECCTTCCHHHHHTTTHHHHHHTTTCEEEEECCTTTTCSCH-----HHHHHHHHHHHHHHHHHTTSCCEEEEEE
T ss_pred CCCcEEEECCCCCCCcchhHHHHHHHHHhCCCeEEEecCCCCCCCch-----HhHHHHHHHHHHHHHHhccCCceEEEEe
Confidence 4568999999765522 4457788888999999999999998763 3467788888888889999999999999
Q ss_pred ChhHHHHHHHHHhCC---CceeeEEEeccccc
Q 020064 121 SWGSTLALAYSLAHP---DKVTGLVLRGIFLL 149 (331)
Q Consensus 121 S~Gg~~a~~~a~~~p---~~v~~li~~~~~~~ 149 (331)
||||.++..++..+| ++|+.+|.++++..
T Consensus 105 S~GG~~a~~~l~~~p~~~~~V~~~v~i~~~~~ 136 (317)
T d1tcaa_ 105 SQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYK 136 (317)
T ss_dssp THHHHHHHHHHHHCGGGTTTEEEEEEESCCTT
T ss_pred CchHHHHHHHHHHCCCcchheeEEEEeCCCCC
Confidence 999999999999987 47999999998654
|
| >d2pbla1 c.69.1.2 (A:1-261) Uncharacterized protein TM1040_2492 {Silicibacter sp. tm1040 [TaxId: 292414]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Uncharacterized protein TM1040 2492 species: Silicibacter sp. tm1040 [TaxId: 292414]
Probab=99.74 E-value=1.4e-17 Score=127.05 Aligned_cols=175 Identities=11% Similarity=0.028 Sum_probs=110.8
Q ss_pred CCCcEEEeccCCCC----CCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCcEEEEE
Q 020064 44 TGHPVVFLHGGPGG----GTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFG 119 (331)
Q Consensus 44 ~~~~vl~~HG~~~~----~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG 119 (331)
..|+||++|||+.. ..+......+.++||.|+.+|+|..+... .....++..+.+..+.+... ++|+|+|
T Consensus 61 ~~P~vv~iHGG~w~~g~~~~~~~~a~~l~~~G~~Vv~~~YRl~p~~~-----~p~~~~d~~~a~~~~~~~~~-~rI~l~G 134 (261)
T d2pbla1 61 PVGLFVFVHGGYWMAFDKSSWSHLAVGALSKGWAVAMPSYELCPEVR-----ISEITQQISQAVTAAAKEID-GPIVLAG 134 (261)
T ss_dssp CSEEEEEECCSTTTSCCGGGCGGGGHHHHHTTEEEEEECCCCTTTSC-----HHHHHHHHHHHHHHHHHHSC-SCEEEEE
T ss_pred CCCeEEEECCCCCccCChhHhhhHHHHHhcCCceeeccccccccccc-----CchhHHHHHHHHHHHHhccc-CceEEEE
Confidence 56889999996532 12334566677899999999999754432 12234455555555555544 7899999
Q ss_pred eChhHHHHHHHHHhCC------CceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhcccc
Q 020064 120 GSWGSTLALAYSLAHP------DKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRL 193 (331)
Q Consensus 120 ~S~Gg~~a~~~a~~~p------~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (331)
||.||.++..++.... ..+++++.+++......... ...... +
T Consensus 135 ~SaGG~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~---~ 183 (261)
T d2pbla1 135 HSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSDLRPLLR----------------------------TSMNEK---F 183 (261)
T ss_dssp ETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCCCCCGGGGG----------------------------STTHHH---H
T ss_pred cchHHHHHHHHhcCcccccchhhchhhhhccccccccchhhh----------------------------hhhccc---c
Confidence 9999999987765432 35888888887554321000 000000 0
Q ss_pred CCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEe
Q 020064 194 NSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQ 273 (331)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~ 273 (331)
..+++... .........+. +.|+++++
T Consensus 184 -------------------------~~~~~~~~---------------------------~~SP~~~~~~~-~~P~li~~ 210 (261)
T d2pbla1 184 -------------------------KMDADAAI---------------------------AESPVEMQNRY-DAKVTVWV 210 (261)
T ss_dssp -------------------------CCCHHHHH---------------------------HTCGGGCCCCC-SCEEEEEE
T ss_pred -------------------------cCCHHHHH---------------------------HhCchhhcccC-CCeEEEEE
Confidence 00000000 00111233445 59999999
Q ss_pred cCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCc
Q 020064 274 GRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANE 309 (331)
Q Consensus 274 G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 309 (331)
|++|..++.+.++.+.+.+ +++.+++++.+|+-..
T Consensus 211 G~~D~~~~~~qs~~~~~~l-~~~~~~~~~~~HF~vi 245 (261)
T d2pbla1 211 GGAERPAFLDQAIWLVEAW-DADHVIAFEKHHFNVI 245 (261)
T ss_dssp ETTSCHHHHHHHHHHHHHH-TCEEEEETTCCTTTTT
T ss_pred ecCCCchHHHHHHHHHHHh-CCCceEeCCCCchhHH
Confidence 9999988888888998887 5788899999997533
|
| >d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.72 E-value=7.3e-18 Score=130.11 Aligned_cols=99 Identities=17% Similarity=0.141 Sum_probs=83.7
Q ss_pred CCCcEEEeccCCCCCC------CCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCcEEE
Q 020064 44 TGHPVVFLHGGPGGGT------TPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQV 117 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~------~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l 117 (331)
++.||||+||+.++.. |......+.+.||+|+++|++|+|.+ ....+++++++.++++.++.+++++
T Consensus 6 ~~~PvvlvHG~~g~~~~~~~~yw~~i~~~L~~~G~~v~~~~~~~~~~~-------~~~a~~l~~~i~~~~~~~g~~~v~l 78 (285)
T d1ex9a_ 6 TKYPIVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQLDTS-------EVRGEQLLQQVEEIVALSGQPKVNL 78 (285)
T ss_dssp CSSCEEEECCTTCCSEETTEESSTTHHHHHHHTTCCEEEECCCSSSCH-------HHHHHHHHHHHHHHHHHHCCSCEEE
T ss_pred CCCCEEEECCCCCCccccchhhHHHHHHHHHhCCCEEEEeCCCCCCCc-------HHHHHHHHHHHHHHHHHcCCCeEEE
Confidence 4567999999765432 33455666678999999999998854 3466789999999999999999999
Q ss_pred EEeChhHHHHHHHHHhCCCceeeEEEeccccc
Q 020064 118 FGGSWGSTLALAYSLAHPDKVTGLVLRGIFLL 149 (331)
Q Consensus 118 vG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~ 149 (331)
|||||||.++..++..+|++|+++|.++++..
T Consensus 79 igHS~GG~~~r~~~~~~p~~v~~lv~i~tPh~ 110 (285)
T d1ex9a_ 79 IGHSHGGPTIRYVAAVRPDLIASATSVGAPHK 110 (285)
T ss_dssp EEETTHHHHHHHHHHHCGGGEEEEEEESCCTT
T ss_pred EEECccHHHHHHHHHHCCccceeEEEECCCCC
Confidence 99999999999999999999999999998754
|
| >d1auoa_ c.69.1.14 (A:) Carboxylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.71 E-value=9.7e-17 Score=119.74 Aligned_cols=56 Identities=13% Similarity=0.118 Sum_probs=44.8
Q ss_pred cccEEEEecCCCCccCCcchHHHHHhCC----CCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhh
Q 020064 266 HINATIVQGRYDVCCPMMSAWDLHKAWP----EADFKVVADAGHSANEPGIAAELVATNEKLKNLI 327 (331)
Q Consensus 266 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 327 (331)
+.|++++||++|.++|.+.++++.+.+. ++++++++ +||.+. ++..+.+.+||++.
T Consensus 157 ~~pvl~~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~-~gH~i~-----~~~~~~i~~wl~~~ 216 (218)
T d1auoa_ 157 RIPALCLHGQYDDVVQNAMGRSAFEHLKSRGVTVTWQEYP-MGHEVL-----PQEIHDIGAWLAAR 216 (218)
T ss_dssp TCCEEEEEETTCSSSCHHHHHHHHHHHHTTTCCEEEEEES-CSSSCC-----HHHHHHHHHHHHHH
T ss_pred CCCEEEEecCCCCccCHHHHHHHHHHHHHCCCCEEEEEEC-CCCccC-----HHHHHHHHHHHHHh
Confidence 5899999999999999998888887762 56888887 789763 33467888898764
|
| >d1ju3a2 c.69.1.21 (A:5-351) Bacterial cocaine esterase N-terminal domain {Rhodococcus sp. mb1 [TaxId: 51612]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Bacterial cocaine esterase N-terminal domain species: Rhodococcus sp. mb1 [TaxId: 51612]
Probab=99.68 E-value=7.8e-16 Score=123.37 Aligned_cols=125 Identities=11% Similarity=-0.035 Sum_probs=89.0
Q ss_pred cceeEeCCCceEEEEeC---CCCCCCcEEEeccCCCCC-----CCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccc
Q 020064 24 TGILKVSDIHTIYWEQS---GNPTGHPVVFLHGGPGGG-----TTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNT 95 (331)
Q Consensus 24 ~~~~~~~~g~~l~~~~~---g~~~~~~vl~~HG~~~~~-----~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~ 95 (331)
...|+..||.+|....+ +...-|+||+.||.+... ........++++||.|+++|.||.|.|....... ..
T Consensus 7 ~v~ipmrDGv~L~~~vy~P~~~~~~P~il~~~pyg~~~~~~~~~~~~~~~~~a~~GY~vv~~d~RG~g~S~G~~~~~-~~ 85 (347)
T d1ju3a2 7 NVMVPMRDGVRLAVDLYRPDADGPVPVLLVRNPYDKFDVFAWSTQSTNWLEFVRDGYAVVIQDTRGLFASEGEFVPH-VD 85 (347)
T ss_dssp EEEEECTTSCEEEEEEEEECCSSCEEEEEEEESSCTTCCHHHHTTSCCTHHHHHTTCEEEEEECTTSTTCCSCCCTT-TT
T ss_pred CeEEECCCCCEEEEEEEEcCCCCCEEEEEEEcCCCCccccCcCcccHHHHHHHHCCCEEEEEeeCCccccCCccccc-cc
Confidence 35788899998886544 322336788889854321 2234556677899999999999999999765322 22
Q ss_pred hHHHHHHHHHHHHHhCC--CcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccc
Q 020064 96 TWDLIDDIEKLRQHLEI--PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLL 149 (331)
Q Consensus 96 ~~~~~~~~~~~~~~~~~--~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~ 149 (331)
.+.-..|+.+.+..... .+|.++|+|+||.+++.+|...|..+++++...+...
T Consensus 86 ~~~d~~d~i~w~~~q~~~~grVg~~G~SygG~~~~~~A~~~~~~l~aiv~~~~~~d 141 (347)
T d1ju3a2 86 DEADAEDTLSWILEQAWCDGNVGMFGVSYLGVTQWQAAVSGVGGLKAIAPSMASAD 141 (347)
T ss_dssp HHHHHHHHHHHHHHSTTEEEEEEECEETHHHHHHHHHHTTCCTTEEEBCEESCCSC
T ss_pred hhhhHHHHHHHHHhhccCCcceEeeeccccccchhhhhhcccccceeeeeccccch
Confidence 23333445455544432 4899999999999999999999989999998887654
|
| >d1lnsa3 c.69.1.21 (A:146-550) X-Prolyl dipeptidyl aminopeptidase PepX, middle domain {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: X-Prolyl dipeptidyl aminopeptidase PepX, middle domain species: Lactococcus lactis [TaxId: 1358]
Probab=99.65 E-value=9e-15 Score=119.05 Aligned_cols=223 Identities=15% Similarity=0.086 Sum_probs=124.6
Q ss_pred ccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCC--------------------CcEEEEEeChhHH
Q 020064 66 FFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEI--------------------PEWQVFGGSWGST 125 (331)
Q Consensus 66 ~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~v~lvG~S~Gg~ 125 (331)
.++++||.|+.+|.||.|.|+.... ..+.+ -.+|..++++.+.. .+|.++|+|+||.
T Consensus 131 ~~~~~GYavv~~D~RG~g~S~G~~~--~~~~~-e~~D~~~~IeWl~~~~~~~~~~~~~~~~~q~WsnGkVGm~G~SY~G~ 207 (405)
T d1lnsa3 131 YFLTRGFASIYVAGVGTRSSDGFQT--SGDYQ-QIYSMTAVIDWLNGRARAYTSRKKTHEIKASWANGKVAMTGKSYLGT 207 (405)
T ss_dssp HHHTTTCEEEEECCTTSTTSCSCCC--TTSHH-HHHHHHHHHHHHTTSSCEESSTTCCCEECCTTEEEEEEEEEETHHHH
T ss_pred HHHhCCCEEEEECCCCCCCCCCccc--cCChh-hhhhHHHHHHHHHhcccccccccccccccccccCCeeEEEecCHHHH
Confidence 4678999999999999999997652 33333 46778888887743 2799999999999
Q ss_pred HHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhccccCCCchHHHHHHH
Q 020064 126 LALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAA 205 (331)
Q Consensus 126 ~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (331)
+.+.+|...|..++++|..++....... +...+........+. .............. ..... .....
T Consensus 208 ~q~~aA~~~pp~LkAivp~~~~~d~y~~---~~~~G~~~~~~~~~~--------~~~~~~~~~~~~~~-~~~~~-~~~~~ 274 (405)
T d1lnsa3 208 MAYGAATTGVEGLELILAEAGISSWYNY---YRENGLVRSPGGFPG--------EDLDVLAALTYSRN-LDGAD-FLKGN 274 (405)
T ss_dssp HHHHHHTTTCTTEEEEEEESCCSBHHHH---HBSSSSBCCCTTCTT--------CCHHHHHHHHCGGG-GSHHH-HHHHH
T ss_pred HHHHHHhcCCccceEEEecCccccHHHH---hhcCCccccccchhh--------hhhhhhhccccccc-cccch-hhhch
Confidence 9999999999899999998887654321 111111100000000 00000000000000 00000 00000
Q ss_pred HHhhhH--HHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCCCccCCc
Q 020064 206 RAWTKW--EMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMM 283 (331)
Q Consensus 206 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~ 283 (331)
..+... ......... ....+.+ + ...+....+.+| ++|+|+|+|..|..+++.
T Consensus 275 ~~~~~~~~~~~~~~~~~------~~~~d~~-----------w-------~~~s~~~~~~~I-~vP~L~i~Gw~D~~v~~~ 329 (405)
T d1lnsa3 275 AEYEKRLAEMTAALDRK------SGDYNQF-----------W-------HDRNYLINTDKV-KADVLIVHGLQDWNVTPE 329 (405)
T ss_dssp HHHHHHHHHHHHHHCTT------TCCCCHH-----------H-------HTTBGGGGGGGC-CSEEEEEEETTCCSSCTH
T ss_pred hhhhhccchhhhhhhhc------cccchhh-----------h-------hhcChhhhhhcC-CCCEEEEEeccCCCCCHH
Confidence 000000 000000000 0000000 0 022345678899 599999999999999988
Q ss_pred chHHHHHhCC---CCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhhhcC
Q 020064 284 SAWDLHKAWP---EADFKVVADAGHSANEPGIAAELVATNEKLKNLIKNG 330 (331)
Q Consensus 284 ~~~~~~~~~~---~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~~~ 330 (331)
.+..+.+.++ ..++++-| .+|..........+.+.+.+|++.-++|
T Consensus 330 ~~~~~y~al~~~~~~~Lilgp-w~H~~~~~~~~~d~~~~~~~wFD~~LkG 378 (405)
T d1lnsa3 330 QAYNFWKALPEGHAKHAFLHR-GAHIYMNSWQSIDFSETINAYFVAKLLD 378 (405)
T ss_dssp HHHHHHHHSCTTCCEEEEEES-CSSCCCTTBSSCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCcEEEEeC-CCCCCCcccccchHHHHHHHHHHHHhCC
Confidence 8888888774 24565556 7897643222445667777788766544
|
| >d1mpxa2 c.69.1.21 (A:24-404) Alpha-amino acid ester hydrolase {Xanthomonas citri [TaxId: 346]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Xanthomonas citri [TaxId: 346]
Probab=99.64 E-value=5e-15 Score=119.55 Aligned_cols=127 Identities=13% Similarity=0.040 Sum_probs=85.9
Q ss_pred ccceeEeCCCceEEEE---eCCCCCCCcEEEeccCCCC----CC--------CCCcccccCCCCcEEEEecCCCCCCCCC
Q 020064 23 STGILKVSDIHTIYWE---QSGNPTGHPVVFLHGGPGG----GT--------TPSNRRFFDPDFYRIILFDQRGAGKSTP 87 (331)
Q Consensus 23 ~~~~~~~~~g~~l~~~---~~g~~~~~~vl~~HG~~~~----~~--------~~~~~~~~~~~g~~vi~~D~~G~G~s~~ 87 (331)
++..|+..||.+|... ..+..+-|+||+.|+.+.+ .. .......++++||.|+.+|.||+|.|+.
T Consensus 25 ~~v~i~~rDG~~L~~~v~~P~~~~~~P~il~~~pYg~~~~~~~~~~~~~~~~~~~~~~~~a~~Gy~vv~~d~RG~g~S~G 104 (381)
T d1mpxa2 25 REVMIPMRDGVKLHTVIVLPKGAKNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQDVRGKYGSEG 104 (381)
T ss_dssp EEEEEECTTSCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTCCS
T ss_pred EEEEEECCCCCEEEEEEEEeCCCCCccEEEEEccCCCCCcccccccccccccchhHHHHHHhCCCEEEEEecCccCCCCC
Confidence 3457888899998744 4443334678888874321 11 1223455678999999999999999986
Q ss_pred CCCCC-----------ccchHHHHHHHHHHHHHh--CCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccc
Q 020064 88 HACLD-----------QNTTWDLIDDIEKLRQHL--EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLL 149 (331)
Q Consensus 88 ~~~~~-----------~~~~~~~~~~~~~~~~~~--~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~ 149 (331)
..... .....+..+.+..+.++. ...+|.++|+|+||.+++.+|...|..++++|...+...
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~D~~~~i~w~~~~~~~~~~~vg~~G~SygG~~~~~~a~~~~~~l~a~v~~~~~~d 179 (381)
T d1mpxa2 105 DYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALTNPHPALKVAVPESPMID 179 (381)
T ss_dssp CCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTSCCTTEEEEEEESCCCC
T ss_pred ceeccchhhhhcccchhHHHHHHHHHHHHHhhcCCcCccceeeecccHHHHHHHHHHhccccccceeeeeccccc
Confidence 43110 012333333333333442 234899999999999999999999999999999887654
|
| >d1jkma_ c.69.1.2 (A:) Carboxylesterase {Bacillus subtilis, brefeldin A esterase [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Bacillus subtilis, brefeldin A esterase [TaxId: 1423]
Probab=99.57 E-value=1.4e-14 Score=115.94 Aligned_cols=127 Identities=20% Similarity=0.134 Sum_probs=80.6
Q ss_pred CccceeEeCCCceEEEE---eCCC-CCCCcEEEeccCCCC---CCC---CCcccccCCCCcEEEEecCCCCCCCCCCCCC
Q 020064 22 YSTGILKVSDIHTIYWE---QSGN-PTGHPVVFLHGGPGG---GTT---PSNRRFFDPDFYRIILFDQRGAGKSTPHACL 91 (331)
Q Consensus 22 ~~~~~~~~~~g~~l~~~---~~g~-~~~~~vl~~HG~~~~---~~~---~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~ 91 (331)
.+...+...||..|... ..+. ...|+||++|||+.. ... ...+..++..|+.|+.+|+|..+...+...
T Consensus 79 ~~~~~i~~~dg~~i~~~iy~P~~~~~~~Pviv~~HGGG~~~gs~~~~~~~~~~~~la~~g~~VvsvdYRla~~~~pe~~- 157 (358)
T d1jkma_ 79 TSTETILGVDGNEITLHVFRPAGVEGVLPGLVYTHGGGMTILTTDNRVHRRWCTDLAAAGSVVVMVDFRNAWTAEGHHP- 157 (358)
T ss_dssp EEEEEEECTTSCEEEEEEEEETTCCSCEEEEEEECCSTTTSSCSSSHHHHHHHHHHHHTTCEEEEEECCCSEETTEECC-
T ss_pred EEEEEEeCCCCCEEEEEEEecCCCCCCCCeEEEecCCeeeeccccccccchHHHHHHhhhheeeeeeecccccccccCC-
Confidence 44556667788766543 3332 223679999997532 221 234555667899999999998644322111
Q ss_pred CccchHHHHHHHHHHHH---HhCCCcEEEEEeChhHHHHHHHHHh-----CCCceeeEEEeccccc
Q 020064 92 DQNTTWDLIDDIEKLRQ---HLEIPEWQVFGGSWGSTLALAYSLA-----HPDKVTGLVLRGIFLL 149 (331)
Q Consensus 92 ~~~~~~~~~~~~~~~~~---~~~~~~v~lvG~S~Gg~~a~~~a~~-----~p~~v~~li~~~~~~~ 149 (331)
....++|..+.+..+.+ .++.++++|+|+|.||.+++.++.. ....+.++++..+...
T Consensus 158 ~p~~l~D~~~a~~wl~~~~~~~~~~ri~i~G~SAGG~La~~~a~~~~~~~~~~~~~~~~~~~p~~~ 223 (358)
T d1jkma_ 158 FPSGVEDCLAAVLWVDEHRESLGLSGVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPYIS 223 (358)
T ss_dssp TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEEEEESCCCC
T ss_pred CchhhHHHHHHHHHHHHhccccCCccceeecccCchHHHHHHHHHHhhcCCCccccccccccceec
Confidence 22345555555555543 4577899999999999999877654 2345778888877544
|
| >d1jjia_ c.69.1.2 (A:) Carboxylesterase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.56 E-value=3.9e-14 Score=111.26 Aligned_cols=122 Identities=20% Similarity=0.129 Sum_probs=74.9
Q ss_pred CccceeEeCCCceEEEEeCC-CCCCCcEEEeccCCCC---CC-CCCcccccCC-CCcEEEEecCCCCCCCCCCCCCCccc
Q 020064 22 YSTGILKVSDIHTIYWEQSG-NPTGHPVVFLHGGPGG---GT-TPSNRRFFDP-DFYRIILFDQRGAGKSTPHACLDQNT 95 (331)
Q Consensus 22 ~~~~~~~~~~g~~l~~~~~g-~~~~~~vl~~HG~~~~---~~-~~~~~~~~~~-~g~~vi~~D~~G~G~s~~~~~~~~~~ 95 (331)
.+..++...+| .+..+.+. .++.|+||++|||+.. .. .......+++ .|+.|+.+|+|...... ....
T Consensus 56 ~~~~~i~~~~g-~i~~~iy~P~~~~P~il~iHGGg~~~g~~~~~~~~~~~l~~~~g~~Vv~v~Yrlap~~~-----~p~~ 129 (311)
T d1jjia_ 56 VEDRTIKGRNG-DIRVRVYQQKPDSPVLVYYHGGGFVICSIESHDALCRRIARLSNSTVVSVDYRLAPEHK-----FPAA 129 (311)
T ss_dssp EEEEEEEETTE-EEEEEEEESSSSEEEEEEECCSTTTSCCTGGGHHHHHHHHHHHTSEEEEEECCCTTTSC-----TTHH
T ss_pred EEEEEEeCCCC-cEEEEEEcCCCCceEEEEEcCCCCccCChhhhhhhhhhhhhcCCcEEEEeccccccccc-----cchh
Confidence 34566777777 55544332 2356789999997532 11 2233344434 59999999999653332 1223
Q ss_pred hHHHHHHHHHHH---HHhCC--CcEEEEEeChhHHHHHHHHHhC----CCceeeEEEeccccc
Q 020064 96 TWDLIDDIEKLR---QHLEI--PEWQVFGGSWGSTLALAYSLAH----PDKVTGLVLRGIFLL 149 (331)
Q Consensus 96 ~~~~~~~~~~~~---~~~~~--~~v~lvG~S~Gg~~a~~~a~~~----p~~v~~li~~~~~~~ 149 (331)
+++..+.+..+. +.++. +++.++|+|.||.+++.++... ...+.+.+++.+...
T Consensus 130 ~~d~~~a~~~~~~~~~~~~~d~~ri~v~G~SaGG~la~~~~~~~~~~~~~~~~~~~l~~p~~~ 192 (311)
T d1jjia_ 130 VYDCYDATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQILIYPVVN 192 (311)
T ss_dssp HHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCCC
T ss_pred hhhhhhhhhHHHHhHHHhCcChhHEEEEeeecCCcceeechhhhhhccccccceeeeecceee
Confidence 444444444333 33443 5899999999999888776542 335778888887654
|
| >d1qfma2 c.69.1.4 (A:431-710) Prolyl oligopeptidase, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Prolyl oligopeptidase, C-terminal domain domain: Prolyl oligopeptidase, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.54 E-value=6.5e-13 Score=102.79 Aligned_cols=64 Identities=16% Similarity=0.053 Sum_probs=48.9
Q ss_pred ccEEEEecCCCCccCCcchHHHHHhCC-----------CCcEEEecCCCCCCCcCC-chhHHHHHHHHHHHhhhcC
Q 020064 267 INATIVQGRYDVCCPMMSAWDLHKAWP-----------EADFKVVADAGHSANEPG-IAAELVATNEKLKNLIKNG 330 (331)
Q Consensus 267 ~P~l~i~G~~D~~~~~~~~~~~~~~~~-----------~~~~~~~~~~gH~~~~~~-~~~~~~~~i~~fl~~~~~~ 330 (331)
.|+|++||++|..||+..+.++.+.+. .+++++++++||.+.... ...+....+.+||++.+++
T Consensus 201 pP~LiihG~~D~~Vp~~~s~~l~~aL~~~g~~~~~~~~~~~l~~~~~~gHgf~~~~~~~~~~~~~~~~fl~k~L~~ 276 (280)
T d1qfma2 201 PSMLLLTADHDDRVVPLHSLKFIATLQYIVGRSRKQNNPLLIHVDTKAGHGAGKPTAKVIEEVSDMFAFIARCLNI 276 (280)
T ss_dssp CEEEEEEETTCCSSCTHHHHHHHHHHHHHTTTSTTCCSCEEEEEESSCCSSTTCCHHHHHHHHHHHHHHHHHHHTC
T ss_pred CceEEeecccCCCCCHHHHHHHHHHHHHhhhhhhcCCCcEEEEEeCcCCCCCCCcHHHHHHHHHHHHHHHHHhcCC
Confidence 589999999999999999988888761 257899999999875432 1223445677899887764
|
| >d1jjfa_ c.69.1.2 (A:) Feruloyl esterase domain of the cellulosomal xylanase z {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase z species: Clostridium thermocellum [TaxId: 1515]
Probab=99.51 E-value=1.9e-12 Score=98.68 Aligned_cols=52 Identities=15% Similarity=0.089 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHHh-----CCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEecccc
Q 020064 97 WDLIDDIEKLRQHL-----EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFL 148 (331)
Q Consensus 97 ~~~~~~~~~~~~~~-----~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~ 148 (331)
..+.+++...++.. +.+++.++|+|+||..++.++.++|+++++++.+++..
T Consensus 114 ~~~~~~li~~i~~~~~~~~d~~~i~i~G~S~GG~~a~~~a~~~Pd~F~~v~~~sg~~ 170 (255)
T d1jjfa_ 114 KDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDKFAYIGPISAAP 170 (255)
T ss_dssp HHHHHTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTCTTTCSEEEEESCCT
T ss_pred HHHHHHHHHHHHHhhccccccceeEeeeccchhHHHHHHHHhCCCcccEEEEEccCc
Confidence 34455555444442 23579999999999999999999999999999988754
|
| >d1lzla_ c.69.1.2 (A:) Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Heroin esterase species: Rhodococcus sp. [TaxId: 1831]
Probab=99.50 E-value=8.3e-14 Score=109.92 Aligned_cols=107 Identities=16% Similarity=0.031 Sum_probs=63.3
Q ss_pred ccceeEeCCCc-eEE---EEeCCCC-CCCcEEEeccCCC---CCC-CCCcccccCC-CCcEEEEecCCCCCCCCCCCCCC
Q 020064 23 STGILKVSDIH-TIY---WEQSGNP-TGHPVVFLHGGPG---GGT-TPSNRRFFDP-DFYRIILFDQRGAGKSTPHACLD 92 (331)
Q Consensus 23 ~~~~~~~~~g~-~l~---~~~~g~~-~~~~vl~~HG~~~---~~~-~~~~~~~~~~-~g~~vi~~D~~G~G~s~~~~~~~ 92 (331)
++..+...+|. .+. |...+.. ..|+||++|||+. +.. .......++. .||.|+.+|+|.......+
T Consensus 51 ~~~~~~~~~g~~~i~~~~~~P~~~~~~~Pvvv~iHGGG~~~g~~~~~~~~~~~la~~~G~~V~~vdYrl~pe~~~~---- 126 (317)
T d1lzla_ 51 RELSAPGLDGDPEVKIRFVTPDNTAGPVPVLLWIHGGGFAIGTAESSDPFCVEVARELGFAVANVEYRLAPETTFP---- 126 (317)
T ss_dssp EEEEECCSTTCCCEEEEEEEESSCCSCEEEEEEECCSTTTSCCGGGGHHHHHHHHHHHCCEEEEECCCCTTTSCTT----
T ss_pred EEEEEecCCCCceEEEEEECCCCCCCCCcEEEEecCcccccccccccchHHHhHHhhcCCcccccccccccccccc----
Confidence 33444455652 233 3433321 2357999999643 211 2233444444 5999999999986554322
Q ss_pred ccchHHHHHHHHHH---HHHhCC--CcEEEEEeChhHHHHHHHHHhC
Q 020064 93 QNTTWDLIDDIEKL---RQHLEI--PEWQVFGGSWGSTLALAYSLAH 134 (331)
Q Consensus 93 ~~~~~~~~~~~~~~---~~~~~~--~~v~lvG~S~Gg~~a~~~a~~~ 134 (331)
..+++..+.+..+ .+.+++ ++|+++|+|.||.+++.++...
T Consensus 127 -~~~~d~~~~~~~~~~~~~~~g~D~~rI~l~G~SaGg~la~~~~~~~ 172 (317)
T d1lzla_ 127 -GPVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKA 172 (317)
T ss_dssp -HHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHH
T ss_pred -ccccccccchhHHHHHHHHhCCCHHHEEEEEeccccHHHHHHHhhh
Confidence 2234443433333 334443 5899999999999999888754
|
| >d2b9va2 c.69.1.21 (A:50-434) Alpha-amino acid ester hydrolase {Acetobacter pasteurianus [TaxId: 438]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Acetobacter pasteurianus [TaxId: 438]
Probab=99.43 E-value=3.1e-12 Score=103.29 Aligned_cols=126 Identities=13% Similarity=0.051 Sum_probs=84.2
Q ss_pred cceeEeCCCceEEEEeC---CCCCCCcEEEeccCCCC-------C------CCCCcccccCCCCcEEEEecCCCCCCCCC
Q 020064 24 TGILKVSDIHTIYWEQS---GNPTGHPVVFLHGGPGG-------G------TTPSNRRFFDPDFYRIILFDQRGAGKSTP 87 (331)
Q Consensus 24 ~~~~~~~~g~~l~~~~~---g~~~~~~vl~~HG~~~~-------~------~~~~~~~~~~~~g~~vi~~D~~G~G~s~~ 87 (331)
...|...||.+|+...+ +..+-|+||+.|+.+.. . ........++++||.|+.+|.||+|.|..
T Consensus 30 ~v~ipmrDG~~L~~~v~~P~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Gy~vv~~d~RG~g~S~G 109 (385)
T d2b9va2 30 EVMVPMRDGVKLYTVIVIPKNARNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVEGGYIRVFQDIRGKYGSQG 109 (385)
T ss_dssp EEEEECTTSCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTCCS
T ss_pred EEEEECCCCCEEEEEEEEcCCCCceeEEEEEccCCCCCccccCCcccccccccchHHHHHHhCCcEEEEEcCCcccCCCC
Confidence 44588899999886544 33333566666754210 0 11234455778999999999999999986
Q ss_pred CCCCC-----------ccchHHHHHHHHHHHHHhC--CCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccc
Q 020064 88 HACLD-----------QNTTWDLIDDIEKLRQHLE--IPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLL 149 (331)
Q Consensus 88 ~~~~~-----------~~~~~~~~~~~~~~~~~~~--~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~ 149 (331)
..... ....+|..+.++.+.++.. ..+|.++|+|+||.+++.+|...|..+++++...+...
T Consensus 110 ~~~~~~~~~~~~~~~~~~e~~D~~~~i~w~~~q~~~~~g~vg~~G~SygG~~~~~~a~~~~~~l~a~~~~~~~~d 184 (385)
T d2b9va2 110 DYVMTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESNGRVGMTGSSYEGFTVVMALLDPHPALKVAAPESPMVD 184 (385)
T ss_dssp CCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEEEEEEEEEEEHHHHHHHHHHTSCCTTEEEEEEEEECCC
T ss_pred ceeeccccccccccchhhHHHHHHHHHHHHHhccCccccceeeccccHHHHHHHHHHhccCCcceEEEEeccccc
Confidence 43111 1123344444444444322 24899999999999999999999989999998876544
|
| >d1u4na_ c.69.1.2 (A:) Carboxylesterase {Alicyclobacillus acidocaldarius [TaxId: 405212]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Alicyclobacillus acidocaldarius [TaxId: 405212]
Probab=99.42 E-value=1.9e-12 Score=101.58 Aligned_cols=121 Identities=19% Similarity=0.103 Sum_probs=68.6
Q ss_pred CccceeEeCCCceEEEE---eCC-CCCCCcEEEeccCCCC----CCCCCcccccCCC-CcEEEEecCCCCCCCCCCCCCC
Q 020064 22 YSTGILKVSDIHTIYWE---QSG-NPTGHPVVFLHGGPGG----GTTPSNRRFFDPD-FYRIILFDQRGAGKSTPHACLD 92 (331)
Q Consensus 22 ~~~~~~~~~~g~~l~~~---~~g-~~~~~~vl~~HG~~~~----~~~~~~~~~~~~~-g~~vi~~D~~G~G~s~~~~~~~ 92 (331)
.+...++. +|.++... ..+ +++.|+||++|||+.. .........++.+ ++.|+.+|+|.......
T Consensus 46 ~~~~~~~~-~g~~i~~~~y~P~~~~~~~Pvvv~iHGGg~~~g~~~~~~~~~~~~a~~~~~~v~~v~Yrl~p~~~~----- 119 (308)
T d1u4na_ 46 VREFDMDL-PGRTLKVRMYRPEGVEPPYPALVYYHGGGWVVGDLETHDPVCRVLAKDGRAVVFSVDYRLAPEHKF----- 119 (308)
T ss_dssp EEEEEEEE-TTEEEEEEEEECTTCCSSEEEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTSCT-----
T ss_pred EEEEEEec-CCceEEEEEEeccccCCCCCEEEEEecCeeeeeccccccchhhhhhhccccccccccccccccccc-----
Confidence 34455555 45455433 323 2234679999997522 2223333444444 46788899986543322
Q ss_pred ccchHHHHHHHHHHHHHh---C--CCcEEEEEeChhHHHHHHHHHhCCC----ceeeEEEecccc
Q 020064 93 QNTTWDLIDDIEKLRQHL---E--IPEWQVFGGSWGSTLALAYSLAHPD----KVTGLVLRGIFL 148 (331)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~---~--~~~v~lvG~S~Gg~~a~~~a~~~p~----~v~~li~~~~~~ 148 (331)
....+|..+.+..+.+.. + .++++++|+|.||.+++.++....+ .+.+..++.+..
T Consensus 120 p~~~~D~~~~~~~l~~~~~~~~~d~~ri~~~G~SaGG~la~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (308)
T d1u4na_ 120 PAAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQLLIYPST 184 (308)
T ss_dssp THHHHHHHHHHHHHHTTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHHTCCCCCCEEEESCCC
T ss_pred ccccchhhhhhhHHHHhHHhcCCCcceEEEeeccccchhHHHHHHhhhhccCCCccccccccccc
Confidence 223444444444444332 2 3479999999999999888765432 355566665543
|
| >d1r88a_ c.69.1.3 (A:) Antigen pt51/mpb51 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen pt51/mpb51 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.40 E-value=1.4e-11 Score=94.28 Aligned_cols=126 Identities=13% Similarity=-0.021 Sum_probs=82.0
Q ss_pred CccceeEeC-CCceEEEEeCCCCCCCcEEEeccCCCCCC---C---CCcccccCCCCcEEEEecCCCCC-CCCCCCCCCc
Q 020064 22 YSTGILKVS-DIHTIYWEQSGNPTGHPVVFLHGGPGGGT---T---PSNRRFFDPDFYRIILFDQRGAG-KSTPHACLDQ 93 (331)
Q Consensus 22 ~~~~~~~~~-~g~~l~~~~~g~~~~~~vl~~HG~~~~~~---~---~~~~~~~~~~g~~vi~~D~~G~G-~s~~~~~~~~ 93 (331)
++..++... .|+.+.....++ ..|+|+++||.+++.. | ..........++.|+.+|--..+ .+..+.. ..
T Consensus 4 ~e~~~v~s~~~~r~~~~~v~~~-~~pvlylLhG~~g~~~~~~w~~~~~~~~~~~~~~~iVV~p~g~~~~~y~~~~~~-~~ 81 (267)
T d1r88a_ 4 YENLMVPSPSMGRDIPVAFLAG-GPHAVYLLDAFNAGPDVSNWVTAGNAMNTLAGKGISVVAPAGGAYSMYTNWEQD-GS 81 (267)
T ss_dssp CEEEEEEETTTTEEEEEEEECC-SSSEEEEECCSSCCSSSCHHHHTSCHHHHHTTSSSEEEEECCCTTSTTSBCSSC-TT
T ss_pred eEEEEEecccCCceeeEEEECC-CCCEEEEcCCCCCCCCcchhhhccHHHHHHhhCCeEEEEECCCCCcCCcccccc-cc
Confidence 444455443 455666655443 4688999999544322 2 22344556689999999852211 1221111 12
Q ss_pred cchH-HHHHHHHHHHHH-h--CCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccc
Q 020064 94 NTTW-DLIDDIEKLRQH-L--EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLL 149 (331)
Q Consensus 94 ~~~~-~~~~~~~~~~~~-~--~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~ 149 (331)
..++ .+.+++...++. + +.+++.+.|+||||..|+.+|.++|+++++++.+++...
T Consensus 82 ~~~~tfl~~eL~~~i~~~~~~d~~r~~i~G~SmGG~~Al~la~~~Pd~F~av~~~SG~~~ 141 (267)
T d1r88a_ 82 KQWDTFLSAELPDWLAANRGLAPGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGFLY 141 (267)
T ss_dssp CBHHHHHHTHHHHHHHHHSCCCSSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCC
T ss_pred ccHHHHHHHHHHHHHHHhcCCCCCceEEEEEcchHHHHHHHHHhCcccccEEEEeCCccC
Confidence 3343 355567766654 3 345899999999999999999999999999999998654
|
| >d1sfra_ c.69.1.3 (A:) Antigen 85a {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85a species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.40 E-value=2.7e-11 Score=93.89 Aligned_cols=129 Identities=12% Similarity=0.018 Sum_probs=82.2
Q ss_pred CCccceeEeC-CCceEEEEeC-CCCCCCcEEEeccCCCCCCC------CCcccccCCCCcEEEEecCCCCCCCCCCCCC-
Q 020064 21 PYSTGILKVS-DIHTIYWEQS-GNPTGHPVVFLHGGPGGGTT------PSNRRFFDPDFYRIILFDQRGAGKSTPHACL- 91 (331)
Q Consensus 21 ~~~~~~~~~~-~g~~l~~~~~-g~~~~~~vl~~HG~~~~~~~------~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~- 91 (331)
+++...+..+ .|+++.+... +....|+|+++||++++... ......+.+.++.+++++..+.+........
T Consensus 8 ~v~~~~~~s~~~~r~~~~~v~~p~~~~Pvl~llhG~~~~~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 87 (288)
T d1sfra_ 8 PVEYLQVPSPSMGRDIKVQFQSGGANSPALYLLDGLRAQDDFSGWDINTPAFEWYDQSGLSVVMPVGGQSSFYSDWYQPA 87 (288)
T ss_dssp CCEEEEEEETTTTEEEEEEEECCSTTBCEEEEECCTTCCSSSCHHHHHCCHHHHHTTSSCEEEEECCCTTCTTCBCSSCE
T ss_pred EEEEEEEECCCCCcEEEEEEeCCCCCceEEEEcCCCCCCCcchhhhhhccHHHHHHhCCCEEEEeccCCCCCCccccCcc
Confidence 3444344433 4455544332 44456889999996654322 1234456678999999998776544322110
Q ss_pred ------CccchH-HHHHHHHHHHH-Hh--CCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccc
Q 020064 92 ------DQNTTW-DLIDDIEKLRQ-HL--EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLL 149 (331)
Q Consensus 92 ------~~~~~~-~~~~~~~~~~~-~~--~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~ 149 (331)
.....+ .+++++...++ .+ +.+++.++|+||||..|+.++.++|+++++++.+++...
T Consensus 88 ~~~~~~~~~~~~~~~~~el~~~i~~~~~~d~~r~~i~G~S~GG~~A~~~a~~~pd~f~av~~~Sg~~~ 155 (288)
T d1sfra_ 88 CGKAGCQTYKWETFLTSELPGWLQANRHVKPTGSAVVGLSMAASSALTLAIYHPQQFVYAGAMSGLLD 155 (288)
T ss_dssp EETTEEECCBHHHHHHTHHHHHHHHHHCBCSSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSC
T ss_pred cccccccchhHHHHHHHHhHHHHHHhcCCCCCceEEEEEccHHHHHHHHHHhccccccEEEEecCccc
Confidence 011222 34555555543 33 345799999999999999999999999999999998654
|
| >d1dqza_ c.69.1.3 (A:) Antigen 85c {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85c species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.36 E-value=4.2e-11 Score=92.23 Aligned_cols=118 Identities=14% Similarity=-0.054 Sum_probs=77.4
Q ss_pred CCceEEEEeCCCCCCCcEEEeccCCCCC---CC---CCcccccCCCCcEEEEecCCCCCCCC-C------CCCCCccchH
Q 020064 31 DIHTIYWEQSGNPTGHPVVFLHGGPGGG---TT---PSNRRFFDPDFYRIILFDQRGAGKST-P------HACLDQNTTW 97 (331)
Q Consensus 31 ~g~~l~~~~~g~~~~~~vl~~HG~~~~~---~~---~~~~~~~~~~g~~vi~~D~~G~G~s~-~------~~~~~~~~~~ 97 (331)
-|+.+.....+. +.|+|+|+||.++.. .| ......+.+.++.||.+|-...+... . ........++
T Consensus 16 ~~r~i~~~~~~~-~~p~lyllhG~~g~~d~~~W~~~~~~~~~~~~~~~ivV~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (280)
T d1dqza_ 16 MGRDIKVQFQGG-GPHAVYLLDGLRAQDDYNGWDINTPAFEEYYQSGLSVIMPVGGQSSFYTDWYQPSQSNGQNYTYKWE 94 (280)
T ss_dssp TTEEEEEEEECC-SSSEEEECCCTTCCSSSCHHHHHSCHHHHHTTSSSEEEEECCCTTCTTSBCSSSCTTTTCCSCCBHH
T ss_pred CCCcceEEeeCC-CCCEEEECCCCCCCCccchhhhcchHHHHHHhCCcEEEEECCCCCCcCccccCCcccccCCcchhHH
Confidence 455665544442 568899999955432 22 12334566789999999953322111 0 0001123343
Q ss_pred H-HHHHHHHHHHHh---CCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccc
Q 020064 98 D-LIDDIEKLRQHL---EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLL 149 (331)
Q Consensus 98 ~-~~~~~~~~~~~~---~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~ 149 (331)
+ +.+++...++.. +.+++.+.|+||||..|+.+|.++|+++++++.+++...
T Consensus 95 ~~~~~el~~~i~~~~~~d~~r~~i~G~SmGG~~Al~lA~~~Pd~F~av~s~SG~~~ 150 (280)
T d1dqza_ 95 TFLTREMPAWLQANKGVSPTGNAAVGLSMSGGSALILAAYYPQQFPYAASLSGFLN 150 (280)
T ss_dssp HHHHTHHHHHHHHHHCCCSSSCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCC
T ss_pred HHHHHHHHHHHHHhcCCCCCceEEEEechHHHHHHHHHHhCcCceeEEEEecCccC
Confidence 3 466777666553 445799999999999999999999999999999998654
|
| >d1ivya_ c.69.1.5 (A:) Human 'protective protein', HPP {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Human 'protective protein', HPP species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.31 E-value=1e-09 Score=90.45 Aligned_cols=130 Identities=13% Similarity=0.145 Sum_probs=88.5
Q ss_pred CccceeEeCCCceEEEEeCCC----CCCCcEEEeccCCCCCCCCCcccc------------cC------CCCcEEEEecC
Q 020064 22 YSTGILKVSDIHTIYWEQSGN----PTGHPVVFLHGGPGGGTTPSNRRF------------FD------PDFYRIILFDQ 79 (331)
Q Consensus 22 ~~~~~~~~~~g~~l~~~~~g~----~~~~~vl~~HG~~~~~~~~~~~~~------------~~------~~g~~vi~~D~ 79 (331)
.-..+++++++..|+|+-..+ .+.|.+|++.||+|.++.+..... +. .+-..++-+|.
T Consensus 21 ~ysGyl~~~~~~~lffw~~~s~~~~~~~Pl~~wlnGGPG~SS~~g~~~e~GP~~v~~~~~~~~~N~~SW~~~anllfIDq 100 (452)
T d1ivya_ 21 QYSGYLKSSGSKHLHYWFVESQKDPENSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYSWNLIANVLYLES 100 (452)
T ss_dssp EEEEEEECSTTEEEEEEEECCSSCGGGSCEEEEECCTTTBCTHHHHHTTTSSEEECTTSSCEEECTTCGGGSSEEEEECC
T ss_pred ceeeeeecCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHHHHHccCCcEEcCCCCeeccCCcchhcccCEEEEec
Confidence 345789999998999886643 245789999999887654321111 00 13467999998
Q ss_pred C-CCCCCCCCCCCCccchHHHHHHHHHHH----HHh---CCCcEEEEEeChhHHHHHHHHHhC----CCceeeEEEeccc
Q 020064 80 R-GAGKSTPHACLDQNTTWDLIDDIEKLR----QHL---EIPEWQVFGGSWGSTLALAYSLAH----PDKVTGLVLRGIF 147 (331)
Q Consensus 80 ~-G~G~s~~~~~~~~~~~~~~~~~~~~~~----~~~---~~~~v~lvG~S~Gg~~a~~~a~~~----p~~v~~li~~~~~ 147 (331)
| |.|.|.........+..+.+.|+..++ +.. ...+++|.|.|+||..+-.+|..- +-.++|+++.++.
T Consensus 101 PvGtGfS~~~~~~~~~~~~~~a~d~~~~l~~f~~~fp~~~~~~~yi~GESYgG~y~P~ia~~i~~~~~i~l~Gi~igng~ 180 (452)
T d1ivya_ 101 PAGVGFSYSDDKFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGNGL 180 (452)
T ss_dssp STTSTTCEESSCCCCCBHHHHHHHHHHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEESCC
T ss_pred CCCcccccCCCCCCCCCcHHHHHHHHHHHHHHHHhchhhcCCceEEeeccccchhhHHHHHHHHhcCcccccceEcCCCc
Confidence 6 999996544323445566666665444 332 345899999999999888887542 2358999999987
Q ss_pred cchh
Q 020064 148 LLRK 151 (331)
Q Consensus 148 ~~~~ 151 (331)
....
T Consensus 181 ~d~~ 184 (452)
T d1ivya_ 181 SSYE 184 (452)
T ss_dssp SBHH
T ss_pred cCch
Confidence 7643
|
| >d3c8da2 c.69.1.2 (A:151-396) Enterochelin esterase, catalytic domain {Shigella flexneri 2a str. 2457T [TaxId: 198215]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Enterochelin esterase, catalytic domain species: Shigella flexneri 2a str. 2457T [TaxId: 198215]
Probab=99.29 E-value=5.3e-12 Score=95.52 Aligned_cols=126 Identities=13% Similarity=-0.019 Sum_probs=69.8
Q ss_pred ccceeEeC-CCceEEEEeCC-----CCCCCcEEEeccCCC--CCCCCCcccccCCCC----cEEEEecCCCCCCCCCCCC
Q 020064 23 STGILKVS-DIHTIYWEQSG-----NPTGHPVVFLHGGPG--GGTTPSNRRFFDPDF----YRIILFDQRGAGKSTPHAC 90 (331)
Q Consensus 23 ~~~~~~~~-~g~~l~~~~~g-----~~~~~~vl~~HG~~~--~~~~~~~~~~~~~~g----~~vi~~D~~G~G~s~~~~~ 90 (331)
++..+.+. .|.++.++.+- +..-|+||++||+.. ..........+.+++ +.++.++....+.......
T Consensus 16 ~~~~~~S~~lg~~~~~~v~~P~~~~~~~~Pvvv~lhG~~~~~~~~~~~~l~~l~~~~~~~~~i~v~~~~~~~~~~~~~~~ 95 (246)
T d3c8da2 16 KEIIWKSERLKNSRRVWIFTTGDVTAEERPLAVLLDGEFWAQSMPVWPVLTSLTHRQQLPPAVYVLIDAIDTTHRAHELP 95 (246)
T ss_dssp EEEEEEETTTTEEEEEEEEEC-----CCCCEEEESSHHHHHHTSCCHHHHHHHHHTTSSCSCEEEEECCCSHHHHHHHSS
T ss_pred EEEEEECCCCCCEEEEEEEECCCCCCCCCCEEEEeCCcchhccCcHHHHHHHHHHhCCCCceEEeecccccccccccccC
Confidence 33344443 24455544432 223478999999432 222333333333333 4445554322111000000
Q ss_pred CCccchHHHHHHHHHHHHHh-----CCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEecccc
Q 020064 91 LDQNTTWDLIDDIEKLRQHL-----EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFL 148 (331)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~-----~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~ 148 (331)
....-.+.+.+++..+++.. +.+++.++|+|+||..++.++.++|+++++++.+++..
T Consensus 96 ~~~~~~~~~~~el~~~v~~~~~~~~d~~~~~i~G~S~GG~~al~~~~~~P~~F~a~~~~sg~~ 158 (246)
T d3c8da2 96 CNADFWLAVQQELLPLVKVIAPFSDRADRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSGSY 158 (246)
T ss_dssp SCHHHHHHHHHTHHHHHHHHSCCCCCGGGCEEEEETHHHHHHHHHHHHCTTTCCEEEEESCCT
T ss_pred ccHHHHHHHHHHhhhHHHHhcccccCccceEEEecCchhHHHhhhhccCCchhcEEEcCCccc
Confidence 01111233455565555553 22579999999999999999999999999999999854
|
| >d1ei9a_ c.69.1.13 (A:) Palmitoyl protein thioesterase 1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.27 E-value=4.9e-12 Score=95.24 Aligned_cols=106 Identities=10% Similarity=0.066 Sum_probs=69.7
Q ss_pred CCC-cEEEeccCCCCCCC---CC-cccccCC--CCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHh--CCCc
Q 020064 44 TGH-PVVFLHGGPGGGTT---PS-NRRFFDP--DFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHL--EIPE 114 (331)
Q Consensus 44 ~~~-~vl~~HG~~~~~~~---~~-~~~~~~~--~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 114 (331)
..| |||++||.+++... +. ....+.+ .|+.|+++++.....+..... ......++++.+.+.++.. +.++
T Consensus 3 ~~P~PVVLvHGlg~s~~~~~~m~~l~~~l~~~~pG~~V~~l~~g~~~~~~~~~~-~~~~~~~~~e~v~~~I~~~~~~~~~ 81 (279)
T d1ei9a_ 3 PAPLPLVIWHGMGDSCCNPLSMGAIKKMVEKKIPGIHVLSLEIGKTLREDVENS-FFLNVNSQVTTVCQILAKDPKLQQG 81 (279)
T ss_dssp TSSCCEEEECCTTCCSCCTTTTHHHHHHHHHHSTTCCEEECCCSSSHHHHHHHH-HHSCHHHHHHHHHHHHHSCGGGTTC
T ss_pred CCCCcEEEECCCCCCCCChHHHHHHHHHHHHHCCCeEEEEEEcCCCcccccccc-hhhhHHHHHHHHHHHHHhccccccc
Confidence 344 89999996654321 22 2222222 489999999765433321110 0123556666666666543 2358
Q ss_pred EEEEEeChhHHHHHHHHHhCCC-ceeeEEEeccccch
Q 020064 115 WQVFGGSWGSTLALAYSLAHPD-KVTGLVLRGIFLLR 150 (331)
Q Consensus 115 v~lvG~S~Gg~~a~~~a~~~p~-~v~~li~~~~~~~~ 150 (331)
+.+|||||||.++-.++.+.++ .|..+|.++++-..
T Consensus 82 v~lVGhSqGGLiaR~~i~~~~~~~V~~lITLgsPH~G 118 (279)
T d1ei9a_ 82 YNAMGFSQGGQFLRAVAQRCPSPPMVNLISVGGQHQG 118 (279)
T ss_dssp EEEEEETTHHHHHHHHHHHCCSSCEEEEEEESCCTTC
T ss_pred eeEEEEccccHHHHHHHHHcCCCCcceEEEECCCCCC
Confidence 9999999999999999999875 59999999986653
|
| >d1rp1a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Dog (Canis familiaris) [TaxId: 9615]
Probab=99.13 E-value=2.1e-11 Score=93.97 Aligned_cols=105 Identities=12% Similarity=0.056 Sum_probs=67.6
Q ss_pred CCCCcEEEeccCCCCCCC---CCcccc-cCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHH----HHhC--C
Q 020064 43 PTGHPVVFLHGGPGGGTT---PSNRRF-FDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLR----QHLE--I 112 (331)
Q Consensus 43 ~~~~~vl~~HG~~~~~~~---~~~~~~-~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~----~~~~--~ 112 (331)
+++|++|++|||.++... ...... +...+++||++|+.... +..-.. .......+.+.+..++ +..+ .
T Consensus 68 ~~~pt~iiiHGw~~~~~~~~~~~~~~a~l~~~d~NVI~VDW~~~a-~~~Y~~-a~~n~~~Vg~~ia~~i~~l~~~~g~~~ 145 (337)
T d1rp1a2 68 TDKKTRFIIHGFIDKGEENWLLDMCKNMFKVEEVNCICVDWKKGS-QTSYTQ-AANNVRVVGAQVAQMLSMLSANYSYSP 145 (337)
T ss_dssp TTSEEEEEECCCCCTTCTTHHHHHHHHHTTTCCEEEEEEECHHHH-SSCHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCG
T ss_pred CCCCEEEEeCCCcCCCCcchHHHHHHHHHhcCCceEEEEeecccc-CcchHH-HHHHHHHHHHHHHHHHHHHHHhcCCCh
Confidence 468899999998765432 222333 33467999999997532 110000 0112333444444444 4434 4
Q ss_pred CcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccch
Q 020064 113 PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLR 150 (331)
Q Consensus 113 ~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~ 150 (331)
++++|+|||+||.+|-.++.+ ..++.+++.++|+.+.
T Consensus 146 ~~vhlIGhSLGAhvAG~aG~~-~~~l~rItgLDPA~P~ 182 (337)
T d1rp1a2 146 SQVQLIGHSLGAHVAGEAGSR-TPGLGRITGLDPVEAS 182 (337)
T ss_dssp GGEEEEEETHHHHHHHHHHHT-STTCCEEEEESCCCTT
T ss_pred hheEEEeecHHHhhhHHHHHh-hccccceeccCCCccc
Confidence 699999999999999766654 4579999999997764
|
| >d1bu8a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.09 E-value=3.9e-11 Score=92.27 Aligned_cols=106 Identities=14% Similarity=0.042 Sum_probs=72.0
Q ss_pred CCCCcEEEeccCCCCCCCC---Cccc-ccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHH----hC--C
Q 020064 43 PTGHPVVFLHGGPGGGTTP---SNRR-FFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQH----LE--I 112 (331)
Q Consensus 43 ~~~~~vl~~HG~~~~~~~~---~~~~-~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~----~~--~ 112 (331)
++.|++|++|||.++.... .... .+...+++||++|+.......-.. .......+.+.+..+++. .+ .
T Consensus 68 ~~~pt~iiiHG~~~~~~~~~~~~~~~a~l~~~d~NVi~VDW~~~a~~~Y~~--a~~n~~~Vg~~ia~~i~~l~~~~g~~~ 145 (338)
T d1bu8a2 68 LDRKTRFIVHGFIDKGEDGWLLDMCKKMFQVEKVNCICVDWRRGSRTEYTQ--ASYNTRVVGAEIAFLVQVLSTEMGYSP 145 (338)
T ss_dssp TTSEEEEEECCSCCTTCTTHHHHHHHHHHTTCCEEEEEEECHHHHSSCHHH--HHHHHHHHHHHHHHHHHHHHHHHCCCG
T ss_pred CCCceEEEeCcccCCCCcccHHHHHHHHHhcCCceEEEEechhhcccchHH--HHHhHHHHHHHHHHHHHHHHHhcCCCc
Confidence 4678999999986654331 2222 344467999999997532111000 112344455555555443 23 4
Q ss_pred CcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccch
Q 020064 113 PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLR 150 (331)
Q Consensus 113 ~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~ 150 (331)
++++|+|||+||.+|-.++...+.++.+++.++|+.+.
T Consensus 146 ~~vhlIGhSLGAhiaG~ag~~l~~kigrItgLDPA~P~ 183 (338)
T d1bu8a2 146 ENVHLIGHSLGAHVVGEAGRRLEGHVGRITGLDPAEPC 183 (338)
T ss_dssp GGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCTT
T ss_pred ceeEEEeccHHHHHHHHHHHhhccccccccccccCcCc
Confidence 78999999999999999999888899999999997654
|
| >d1wpxa1 c.69.1.5 (A:1-421) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.07 E-value=2.7e-08 Score=80.81 Aligned_cols=129 Identities=16% Similarity=0.165 Sum_probs=84.9
Q ss_pred ccceeEeCC-CceEEEEeCC----CCCCCcEEEeccCCCCCCCCCcccc-----------cC------CCCcEEEEecCC
Q 020064 23 STGILKVSD-IHTIYWEQSG----NPTGHPVVFLHGGPGGGTTPSNRRF-----------FD------PDFYRIILFDQR 80 (331)
Q Consensus 23 ~~~~~~~~~-g~~l~~~~~g----~~~~~~vl~~HG~~~~~~~~~~~~~-----------~~------~~g~~vi~~D~~ 80 (331)
-..++++.+ +..++|+-.. +.+.|.||++.||+|.+..+..... +. .+-.+++-+|.|
T Consensus 17 ysGyl~v~~~~~~lfyw~~~s~~~~~~~Pl~~WlnGGPG~SS~~g~~~e~GP~~i~~~~~~~~N~~sW~~~anllfiD~P 96 (421)
T d1wpxa1 17 YTGYLDVEDEDKHFFFWTFESRNDPAKDPVILWLNGGPGCSSLTGLFFELGPSSIGPDLKPIGNPYSWNSNATVIFLDQP 96 (421)
T ss_dssp EEEEEECTTSCCEEEEEEECCSSCTTTSCEEEEECCTTTBCTHHHHHHTTSSEEECTTSCEEECTTCGGGSSEEEEECCS
T ss_pred eeeeeecCCCCceEEEEEEEeCCCCCCCCEEEEECCCCcHHHHHHHHHhcCCcEECCCCccccCCcccccccCEEEEecC
Confidence 356888864 5678887443 2346789999999887654321111 00 144789999955
Q ss_pred -CCCCCCCCCCCCccchHHHHHHHHHHHHHh---------CCCcEEEEEeChhHHHHHHHHHhC------CCceeeEEEe
Q 020064 81 -GAGKSTPHACLDQNTTWDLIDDIEKLRQHL---------EIPEWQVFGGSWGSTLALAYSLAH------PDKVTGLVLR 144 (331)
Q Consensus 81 -G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~v~lvG~S~Gg~~a~~~a~~~------p~~v~~li~~ 144 (331)
|.|.|..... ...+..+.++|+.+++..+ ...+++|.|.|+||..+..+|..- +-.++|+++.
T Consensus 97 vGtGfSy~~~~-~~~~~~~~a~d~~~fl~~f~~~fp~~~~k~~~~yi~GESYgG~yvP~la~~i~~~~~~~inlkGi~iG 175 (421)
T d1wpxa1 97 VNVGFSYSGSS-GVSNTVAAGKDVYNFLELFFDQFPEYVNKGQDFHIAGESYAGHYIPVFASEILSHKDRNFNLTSVLIG 175 (421)
T ss_dssp TTSTTCBCSSC-CCCSHHHHHHHHHHHHHHHHHHCTHHHHTCCCEEEEEETTHHHHHHHHHHHHHHCSSCSSCCCEEEEE
T ss_pred CCCCceecCCc-cccchHHHHHHHHHHHHHHHHhChhhhccCCCcEEeeecccccccHHHHHHHHHccCCCcceeeeEec
Confidence 9999964332 2345556666666655432 235799999999999888877542 2257899999
Q ss_pred ccccchhh
Q 020064 145 GIFLLRKK 152 (331)
Q Consensus 145 ~~~~~~~~ 152 (331)
++......
T Consensus 176 ng~~dp~~ 183 (421)
T d1wpxa1 176 NGLTDPLT 183 (421)
T ss_dssp SCCCCHHH
T ss_pred CCcccchh
Confidence 98776543
|
| >d1wb4a1 c.69.1.2 (A:803-1075) Feruloyl esterase domain of the cellulosomal xylanase y {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase y species: Clostridium thermocellum [TaxId: 1515]
Probab=99.05 E-value=7.9e-09 Score=79.01 Aligned_cols=120 Identities=10% Similarity=-0.069 Sum_probs=71.9
Q ss_pred CccceeEeCCCceEEEEeCCC----CC--CCcEEEeccCCCCCC-CCCc-----------ccccCCCCcEEEEecCCCCC
Q 020064 22 YSTGILKVSDIHTIYWEQSGN----PT--GHPVVFLHGGPGGGT-TPSN-----------RRFFDPDFYRIILFDQRGAG 83 (331)
Q Consensus 22 ~~~~~~~~~~g~~l~~~~~g~----~~--~~~vl~~HG~~~~~~-~~~~-----------~~~~~~~g~~vi~~D~~G~G 83 (331)
++...++..+| +..+..+-+ ++ -|+|+++||++++.. ++.. ........+.|+.++..+.+
T Consensus 27 v~~~~~~~~~~-~r~~~vylP~~y~~~k~yPvl~~lhG~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 105 (273)
T d1wb4a1 27 IVKETYTGING-TKSLNVYLPYGYDPNKKYNIFYLMHGGGENENTIFSNDVKLQNILDHAIMNGELEPLIVVTPTFNGGN 105 (273)
T ss_dssp EEEEEEEETTE-EEEEEEEECTTCCTTSCCEEEEEECCTTCCTTSTTSTTTCHHHHHHHHHHHTSSCCEEEEECCSCSTT
T ss_pred EEEEEEecCCC-eEEEEEEeCCCCCCCCCceEEEEEeCCCCCcchhhhhccchhHHHHhhhhhhccCCceeeccccCCCC
Confidence 44455666676 334333322 22 267899999766533 2211 11122357888888877643
Q ss_pred CCCCCCCCCccchHHHHHHHHHHHH---------------HhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEecccc
Q 020064 84 KSTPHACLDQNTTWDLIDDIEKLRQ---------------HLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFL 148 (331)
Q Consensus 84 ~s~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~ 148 (331)
..... ........+....+ ..+.+++.+.|+|+||..++.+|.++|+++.+++.+++..
T Consensus 106 ~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~G~S~GG~~a~~~a~~~pd~f~a~~~~sg~~ 179 (273)
T d1wb4a1 106 CTAQN------FYQEFRQNVIPFVESKYSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLDYVAYFMPLSGDY 179 (273)
T ss_dssp CCTTT------HHHHHHHTHHHHHHHHSCCSCSSCSHHHHHTTGGGEEEEEETHHHHHHHHHHHHHTTTCCEEEEESCCC
T ss_pred Ccccc------chhcccccccchhhhhhhhhhhhhhhhcccCCccceEEEeeCCcchhhhhhhhcCCCcceEEEEeCccc
Confidence 32211 11222222221211 1244579999999999999999999999999999998754
|
| >d2d81a1 c.69.1.37 (A:21-338) Polyhydroxybutyrate depolymerase {Penicillium funiculosum [TaxId: 28572]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PHB depolymerase-like domain: Polyhydroxybutyrate depolymerase species: Penicillium funiculosum [TaxId: 28572]
Probab=99.01 E-value=6.6e-10 Score=85.71 Aligned_cols=43 Identities=12% Similarity=0.046 Sum_probs=36.4
Q ss_pred cccEEEEecCCCCccCCcchHHHHHhCC------CCcEEEecCCCCCCC
Q 020064 266 HINATIVQGRYDVCCPMMSAWDLHKAWP------EADFKVVADAGHSAN 308 (331)
Q Consensus 266 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~------~~~~~~~~~~gH~~~ 308 (331)
+.|+++++|++|..||++.++++.+.+. +++++..+++||.+.
T Consensus 90 ~~pvll~hG~~D~~Vpp~~s~~l~~~l~~~~~~~~v~yv~~~gagH~fp 138 (318)
T d2d81a1 90 QRKIYMWTGSSDTTVGPNVMNQLKAQLGNFDNSANVSYVTTTGAVHTFP 138 (318)
T ss_dssp GCEEEEEEETTCCSSCHHHHHHHHHHHTTTSCGGGEEEEEETTCCSSEE
T ss_pred CCCEEEEecCCCCCcCHHHHHHHHHHHHcCcCCCceEEEEeCCCCCCCC
Confidence 5899999999999999999998888763 345677899999874
|
| >d1pv1a_ c.69.1.34 (A:) Hypothetical esterase YJL068C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical esterase YJL068C domain: Hypothetical esterase YJL068C species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.92 E-value=2.9e-09 Score=81.86 Aligned_cols=104 Identities=13% Similarity=0.062 Sum_probs=62.9
Q ss_pred CcEEEeccCCCCCCCC----CcccccCCCCcEEEEecCCC----------------CCCCCCCCC-----CCccchHH-H
Q 020064 46 HPVVFLHGGPGGGTTP----SNRRFFDPDFYRIILFDQRG----------------AGKSTPHAC-----LDQNTTWD-L 99 (331)
Q Consensus 46 ~~vl~~HG~~~~~~~~----~~~~~~~~~g~~vi~~D~~G----------------~G~s~~~~~-----~~~~~~~~-~ 99 (331)
|+|+++||.+++...| .......+.+..|+.++... .+.+..... .....+++ +
T Consensus 50 PVLYlLhG~~~~~~~w~~~~~~~~~~~~~~~~vv~~~~~p~~~~~~~~~~~~~~~g~~~~~y~d~~~~p~~~~~~~~~~i 129 (299)
T d1pv1a_ 50 PTVFYLSGLTCTPDNASEKAFWQFQADKYGFAIVFPDTSPRGDEVANDPEGSWDFGQGAGFYLNATQEPYAQHYQMYDYI 129 (299)
T ss_dssp CEEEEECCTTCCHHHHHHHSCHHHHHHHHTCEEEECCSSCCSTTSCCCTTCCSSSSSSCCTTCBCCSHHHHTTCBHHHHH
T ss_pred CEEEEcCCCCCCHHHHHHhhhHHHHHHHcCCceecCCCcccccccCCcccccccccCCCccccccccCCcccccchHHHH
Confidence 6788999977664332 12222334677888877432 111111110 00112233 4
Q ss_pred HHHHHHHHHH-hCC---------CcEEEEEeChhHHHHHHHHHh--CCCceeeEEEeccccc
Q 020064 100 IDDIEKLRQH-LEI---------PEWQVFGGSWGSTLALAYSLA--HPDKVTGLVLRGIFLL 149 (331)
Q Consensus 100 ~~~~~~~~~~-~~~---------~~v~lvG~S~Gg~~a~~~a~~--~p~~v~~li~~~~~~~ 149 (331)
.+++...++. +.. ++..|.|+||||.-|+.+|.+ +|+++.+++..++...
T Consensus 130 ~~EL~p~i~~~~~~~~~r~~~~~~~~~I~G~SmGG~gAl~~al~~~~p~~f~~~~s~s~~~~ 191 (299)
T d1pv1a_ 130 HKELPQTLDSHFNKNGDVKLDFLDNVAITGHSMGGYGAICGYLKGYSGKRYKSCSAFAPIVN 191 (299)
T ss_dssp HTHHHHHHHHHHCC-----BCSSSSEEEEEETHHHHHHHHHHHHTGGGTCCSEEEEESCCCC
T ss_pred HHHHHHHHHHhCCcccccccccccceEEEeecccHHHHHHHHHHhcCCCceEEEeeccCcCC
Confidence 5566666654 222 468999999999999999986 4889999998887543
|
| >d2gzsa1 c.69.1.38 (A:41-305) Enterobactin and salmochelin hydrolase IroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: IroE-like domain: Enterobactin and salmochelin hydrolase IroE species: Escherichia coli [TaxId: 562]
Probab=98.79 E-value=6.1e-09 Score=79.29 Aligned_cols=34 Identities=15% Similarity=0.161 Sum_probs=27.1
Q ss_pred CcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccc
Q 020064 113 PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIF 147 (331)
Q Consensus 113 ~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~ 147 (331)
.++.++|+|+||..++.++.+ ++.+.+++.+++.
T Consensus 141 ~~~~i~G~S~GG~~a~~~~~~-~~~f~~~~a~s~~ 174 (265)
T d2gzsa1 141 QRRGLWGHSYGGLFVLDSWLS-SSYFRSYYSASPS 174 (265)
T ss_dssp EEEEEEEETHHHHHHHHHHHH-CSSCSEEEEESGG
T ss_pred CceEEEeccHHHHHHHHHHHc-CcccCEEEEECCc
Confidence 468899999999999987665 5577788877664
|
| >d1ac5a_ c.69.1.5 (A:) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]
Probab=98.78 E-value=1.3e-07 Score=77.98 Aligned_cols=107 Identities=14% Similarity=0.145 Sum_probs=70.4
Q ss_pred CCcEEEeccCCCCCCCCCcccc----cC-------------CCCcEEEEecCC-CCCCCCCCCC--------CCccchHH
Q 020064 45 GHPVVFLHGGPGGGTTPSNRRF----FD-------------PDFYRIILFDQR-GAGKSTPHAC--------LDQNTTWD 98 (331)
Q Consensus 45 ~~~vl~~HG~~~~~~~~~~~~~----~~-------------~~g~~vi~~D~~-G~G~s~~~~~--------~~~~~~~~ 98 (331)
.|.||++.||+|.++.+..... .. .+-.+++-+|.| |.|.|..... ....+.++
T Consensus 67 ~Pl~lWlnGGPGcSS~~g~f~E~GP~~v~~~~~l~~Np~SWn~~an~lfIDqPvGvGfSy~~~~~~~~~~~~~~~~~~~~ 146 (483)
T d1ac5a_ 67 RPLIIWLNGGPGCSSMDGALVESGPFRVNSDGKLYLNEGSWISKGDLLFIDQPTGTGFSVEQNKDEGKIDKNKFDEDLED 146 (483)
T ss_dssp CCEEEEECCTTTBCTHHHHHHSSSSEEECTTSCEEECTTCGGGTSEEEEECCSTTSTTCSSCCSSGGGSCTTSSCCSHHH
T ss_pred CCEEEEECCCCcHHHHHHHHHccCCeEECCCCceeeCCCcccccCCEEEEeCCCCcCeeecCCCCccccccccccCCHHH
Confidence 4889999999887654211110 00 145789999975 8999864321 11234566
Q ss_pred HHHHHHHHHHHh-------CCCcEEEEEeChhHHHHHHHHHhC------------CCceeeEEEeccccchh
Q 020064 99 LIDDIEKLRQHL-------EIPEWQVFGGSWGSTLALAYSLAH------------PDKVTGLVLRGIFLLRK 151 (331)
Q Consensus 99 ~~~~~~~~~~~~-------~~~~v~lvG~S~Gg~~a~~~a~~~------------p~~v~~li~~~~~~~~~ 151 (331)
.++++..++... ...+++|.|.|+||..+-.+|..- +-.++++++.++.....
T Consensus 147 ~a~~~~~fl~~f~~~fp~~~~~~~yI~GESYgG~YvP~la~~i~~~n~~~~~~~~~inLkGi~IGNg~~d~~ 218 (483)
T d1ac5a_ 147 VTKHFMDFLENYFKIFPEDLTRKIILSGESYAGQYIPFFANAILNHNKFSKIDGDTYDLKALLIGNGWIDPN 218 (483)
T ss_dssp HHHHHHHHHHHHHHHCTTGGGSEEEEEEEETHHHHHHHHHHHHHHHHHHCCSTTSCCEEEEEEEEEECCCHH
T ss_pred HHHHHHHHHHHHHHhCcccccCCeEEeecccccchHHHHHHHHHHhccccccCCCcccceeeeecCCccChh
Confidence 677766655432 335899999999998888887642 12589999888876543
|
| >d1ku0a_ c.69.1.18 (A:) Lipase L1 {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase L1 species: Bacillus stearothermophilus [TaxId: 1422]
Probab=98.62 E-value=2e-08 Score=79.06 Aligned_cols=97 Identities=14% Similarity=0.054 Sum_probs=66.5
Q ss_pred CCCcEEEeccCCCC-C------CCCC-----cccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHh-
Q 020064 44 TGHPVVFLHGGPGG-G------TTPS-----NRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHL- 110 (331)
Q Consensus 44 ~~~~vl~~HG~~~~-~------~~~~-----~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~- 110 (331)
++-||||+||+.+- . .+|. ....|.+.|++|++...... .+.++-++.+...++..
T Consensus 6 ~~yPIVLvHGl~Gf~~~~l~~~~YW~G~~~~I~~~L~~~G~~V~~~~V~p~-----------~S~~~RA~eL~~~I~~~~ 74 (388)
T d1ku0a_ 6 NDAPIVLLHGFTGWGREEMLGFKYWGGVRGDIEQWLNDNGYRTYTLAVGPL-----------SSNWDRACEAYAQLVGGT 74 (388)
T ss_dssp CCCCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHHTTCCEEECCCCSS-----------BCHHHHHHHHHHHHHCEE
T ss_pred CCCCEEEeCCcccCCccccCcccccCCchhhhHHHHHhCCCEEEEeccCCc-----------cCHHHHHHHHHHHHhhhh
Confidence 45689999995432 1 1232 23334468999999987532 35566666666666532
Q ss_pred ---C-------------------------CCcEEEEEeChhHHHHHHHHHhCC-------------------------Cc
Q 020064 111 ---E-------------------------IPEWQVFGGSWGSTLALAYSLAHP-------------------------DK 137 (331)
Q Consensus 111 ---~-------------------------~~~v~lvG~S~Gg~~a~~~a~~~p-------------------------~~ 137 (331)
| ..||+||||||||..+-.++...| +.
T Consensus 75 ~d~G~~hs~~~~~~~~~r~y~g~~~~~~~~~kVnLIgHS~GGld~Ryl~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 154 (388)
T d1ku0a_ 75 VDYGAAHAAKHGHARFGRTYPGLLPELKRGGRVHIIAHSQGGQTARMLVSLLENGSQEEREYAKEHNVSLSPLFEGGHRF 154 (388)
T ss_dssp EECCHHHHHHHTSCSEEEEECCSCGGGGGTCCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCCCC
T ss_pred hhhhHhHHhhhcccccCccCcccccccccCCceeEeecccccHHHHHHHHHhccccccccccccccccccccccccCCcc
Confidence 1 148999999999999988886543 36
Q ss_pred eeeEEEeccccchh
Q 020064 138 VTGLVLRGIFLLRK 151 (331)
Q Consensus 138 v~~li~~~~~~~~~ 151 (331)
|+.++.++++-...
T Consensus 155 V~SvTTIsTPH~GS 168 (388)
T d1ku0a_ 155 VLSVTTIATPHDGT 168 (388)
T ss_dssp EEEEEEESCCTTCC
T ss_pred eEEEEeccCCCCCc
Confidence 99999999876543
|
| >d2h7ca1 c.69.1.1 (A:1021-1553) Mammalian carboxylesterase (liver carboxylesterase I) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Mammalian carboxylesterase (liver carboxylesterase I) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.19 E-value=3.5e-06 Score=70.47 Aligned_cols=120 Identities=13% Similarity=0.087 Sum_probs=77.2
Q ss_pred CCCceEEEEeC-CC---CCCCcEEEeccCCC---CCCCCCcccccCCCCcEEEEecCC----CCCCCCCCCCCCccchHH
Q 020064 30 SDIHTIYWEQS-GN---PTGHPVVFLHGGPG---GGTTPSNRRFFDPDFYRIILFDQR----GAGKSTPHACLDQNTTWD 98 (331)
Q Consensus 30 ~~g~~l~~~~~-g~---~~~~~vl~~HG~~~---~~~~~~~~~~~~~~g~~vi~~D~~----G~G~s~~~~~~~~~~~~~ 98 (331)
.|-..|..+.- +. ..-|++|++|||+. +...+.-......++.-||.+++| |+-.+........+-+.|
T Consensus 94 EDCL~LnI~~P~~~~~~~~lPV~v~ihGG~~~~gs~~~~~~~~~~~~~~vIvVt~nYRLg~~GFl~~~~~~~~gN~Gl~D 173 (532)
T d2h7ca1 94 EDCLYLNIYTPADLTKKNRLPVMVWIHGGGLMVGAASTYDGLALAAHENVVVVTIQYRLGIWGFFSTGDEHSRGNWGHLD 173 (532)
T ss_dssp SCCCEEEEEECSCTTSCCCEEEEEEECCSTTTSCCSTTSCCHHHHHHHTCEEEEECCCCHHHHHCCCSSTTCCCCHHHHH
T ss_pred CcCCEEEEEECCCCCCCCCcEEEEEEeCCcccccccccCCchhhhhcCceEEEEEeeccCCCccccccccccccccccHH
Confidence 45556665543 21 12378999999643 233333333344688999999999 333222222224567778
Q ss_pred HHHHHHHHHHHh---C--CCcEEEEEeChhHHHHHHHHHhC--CCceeeEEEeccccc
Q 020064 99 LIDDIEKLRQHL---E--IPEWQVFGGSWGSTLALAYSLAH--PDKVTGLVLRGIFLL 149 (331)
Q Consensus 99 ~~~~~~~~~~~~---~--~~~v~lvG~S~Gg~~a~~~a~~~--p~~v~~li~~~~~~~ 149 (331)
+...++.+-+.+ | .++|.|+|+|.||..+..++... ...+.++|+.++...
T Consensus 174 q~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SG~~~ 231 (532)
T d2h7ca1 174 QVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVAL 231 (532)
T ss_dssp HHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTT
T ss_pred HHHHHHHHHHHHHHhcCCcceeeeeccccccchHHHHHhhhhccCcchhhhhhccccc
Confidence 887777776655 4 35899999999998877776542 447899999987553
|
| >d1qe3a_ c.69.1.1 (A:) Thermophilic para-nitrobenzyl esterase (PNB esterase) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Thermophilic para-nitrobenzyl esterase (PNB esterase) species: Bacillus subtilis [TaxId: 1423]
Probab=97.98 E-value=9.1e-06 Score=67.00 Aligned_cols=105 Identities=16% Similarity=0.127 Sum_probs=68.6
Q ss_pred CCcEEEeccCCCC---CCC--CCcccccCCCCcEEEEecCC----CCCCCC--CCCCCCccchHHHHHHHHHHHHHh---
Q 020064 45 GHPVVFLHGGPGG---GTT--PSNRRFFDPDFYRIILFDQR----GAGKST--PHACLDQNTTWDLIDDIEKLRQHL--- 110 (331)
Q Consensus 45 ~~~vl~~HG~~~~---~~~--~~~~~~~~~~g~~vi~~D~~----G~G~s~--~~~~~~~~~~~~~~~~~~~~~~~~--- 110 (331)
-|++|+|||++.. ... +.......+.+.-||.+++| |+-... .......+-+.|+...++.+-+.+
T Consensus 96 lPV~v~ihGG~~~~g~~~~~~~~~~~~~~~~~vVvV~~nYRlg~~GFl~~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~F 175 (483)
T d1qe3a_ 96 LPVMVWIHGGAFYLGAGSEPLYDGSKLAAQGEVIVVTLNYRLGPFGFLHLSSFDEAYSDNLGLLDQAAALKWVRENISAF 175 (483)
T ss_dssp EEEEEEECCSTTTSCCTTSGGGCCHHHHHHHTCEEEEECCCCHHHHSCCCTTTCTTSCSCHHHHHHHHHHHHHHHHGGGG
T ss_pred CceEEEEeecccccCCccccccccccccccCceEEEeecccccchhhccccccccccccccccHHHHHHHHHHHHHHHHc
Confidence 4789999996532 222 11222233357999999999 332211 111123567778877777776655
Q ss_pred C--CCcEEEEEeChhHHHHHHHHHhC--CCceeeEEEeccccc
Q 020064 111 E--IPEWQVFGGSWGSTLALAYSLAH--PDKVTGLVLRGIFLL 149 (331)
Q Consensus 111 ~--~~~v~lvG~S~Gg~~a~~~a~~~--p~~v~~li~~~~~~~ 149 (331)
| .++|.|+|||.||..+..++... ...+.++|+.++...
T Consensus 176 GGDp~~VTl~G~SAGa~sv~~~l~sp~~~gLF~raI~~SGs~~ 218 (483)
T d1qe3a_ 176 GGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGASR 218 (483)
T ss_dssp TEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCCC
T ss_pred CCCcccceeeccccccchhhhhhcccccCCcceeeccccCCcc
Confidence 4 35899999999999888776543 347999999987654
|
| >d1ea5a_ c.69.1.1 (A:) Acetylcholinesterase {Pacific electric ray (Torpedo californica) [TaxId: 7787]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Pacific electric ray (Torpedo californica) [TaxId: 7787]
Probab=97.97 E-value=4.2e-06 Score=70.00 Aligned_cols=120 Identities=13% Similarity=0.034 Sum_probs=75.1
Q ss_pred CCCceEEEEeC-CC-CCCCcEEEeccCCC---CCCC--CCcccccCCCCcEEEEecCC----CCCCCC-CCCCCCccchH
Q 020064 30 SDIHTIYWEQS-GN-PTGHPVVFLHGGPG---GGTT--PSNRRFFDPDFYRIILFDQR----GAGKST-PHACLDQNTTW 97 (331)
Q Consensus 30 ~~g~~l~~~~~-g~-~~~~~vl~~HG~~~---~~~~--~~~~~~~~~~g~~vi~~D~~----G~G~s~-~~~~~~~~~~~ 97 (331)
.|-..|..++- .. .+.|++|+||||+. +... +........++.-||.+++| |+-.+. .......+-+.
T Consensus 89 EDCL~LnI~~P~~~~~~lPV~v~ihGG~~~~g~~~~~~~~~~~~~~~~~vvvVt~nYRlg~~GFl~~~~~~~~~gN~Gl~ 168 (532)
T d1ea5a_ 89 EDCLYLNIWVPSPRPKSTTVMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFLALHGSQEAPGNVGLL 168 (532)
T ss_dssp SCCCEEEEEECSSCCSSEEEEEEECCSTTTCCCTTCGGGCTHHHHHHHTCEEEECCCCCHHHHHCCCTTCSSSCSCHHHH
T ss_pred ccCCEEEEEeCCCCCCCCcEEEEEEcCCcccccCCccccCcchhhcccCccEEEEeeccccccccccccccCCCCcccch
Confidence 45445555442 22 23478999999642 2222 22222234578999999998 333222 11122356778
Q ss_pred HHHHHHHHHHHHh---C--CCcEEEEEeChhHHHHHHHHHhC--CCceeeEEEeccccc
Q 020064 98 DLIDDIEKLRQHL---E--IPEWQVFGGSWGSTLALAYSLAH--PDKVTGLVLRGIFLL 149 (331)
Q Consensus 98 ~~~~~~~~~~~~~---~--~~~v~lvG~S~Gg~~a~~~a~~~--p~~v~~li~~~~~~~ 149 (331)
|+...++.+-+.+ | .++|.|+|+|.||..+..++... ...+.++|+.++...
T Consensus 169 Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~~~sp~~~~lF~~aI~~Sg~~~ 227 (532)
T d1ea5a_ 169 DQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSPN 227 (532)
T ss_dssp HHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCTT
T ss_pred hHHHHHHHHHHHHHhhcCCccceEeeeecccccchhhhccCccchhhhhhheeeccccc
Confidence 8888777776665 4 35899999999998877766542 347999999886553
|
| >d2ha2a1 c.69.1.1 (A:1-542) Acetylcholinesterase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.87 E-value=6.3e-06 Score=69.06 Aligned_cols=120 Identities=12% Similarity=0.015 Sum_probs=74.0
Q ss_pred CCCceEEEEeC-C--CCCCCcEEEeccCCC---CCCC--CCcccccCCCCcEEEEecCC----CCCCCC-CCCCCCccch
Q 020064 30 SDIHTIYWEQS-G--NPTGHPVVFLHGGPG---GGTT--PSNRRFFDPDFYRIILFDQR----GAGKST-PHACLDQNTT 96 (331)
Q Consensus 30 ~~g~~l~~~~~-g--~~~~~~vl~~HG~~~---~~~~--~~~~~~~~~~g~~vi~~D~~----G~G~s~-~~~~~~~~~~ 96 (331)
.|-..|..+.- . ..+-|++|++|||+. +... .........++.-||.+++| |+-.+. .......+-+
T Consensus 94 EDCL~LnI~~P~~~~~~~lPV~v~ihGG~~~~gs~~~~~~~~~~~~~~~~vvvVt~nYRlg~~Gfl~~~~~~~~~gN~Gl 173 (542)
T d2ha2a1 94 EDCLYLNVWTPYPRPASPTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSREAPGNVGL 173 (542)
T ss_dssp SCCCEEEEEEESSCCSSCEEEEEEECCSTTTCCCTTSGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCTTCSSCCSCHHH
T ss_pred CcCCEEEEEecCCCCCCCCcEEEEEEECccccccCcccccCchhhhhhccceeEeeeeeccceeeecccccccCCCcCCc
Confidence 45445554432 1 122378999999643 2222 11111222478999999999 443222 1112235667
Q ss_pred HHHHHHHHHHHHHh---C--CCcEEEEEeChhHHHHHHHHHhC--CCceeeEEEeccccc
Q 020064 97 WDLIDDIEKLRQHL---E--IPEWQVFGGSWGSTLALAYSLAH--PDKVTGLVLRGIFLL 149 (331)
Q Consensus 97 ~~~~~~~~~~~~~~---~--~~~v~lvG~S~Gg~~a~~~a~~~--p~~v~~li~~~~~~~ 149 (331)
.|+...++.+-+.+ | .++|.|+|+|.||..+..++... ...+.++|+.++...
T Consensus 174 ~Dq~~AL~WV~~nI~~FGGDP~~VTi~G~SAGa~sv~~ll~sp~~~~LF~~aI~~SG~~~ 233 (542)
T d2ha2a1 174 LDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGTPN 233 (542)
T ss_dssp HHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCCSS
T ss_pred ccHHHHHHHHHHHHHHhhcCccccccccccccccchhhhhhhhhhhHHhhhheeeccccC
Confidence 78777777776655 4 34899999999999888776643 247999999887543
|
| >d1p0ia_ c.69.1.1 (A:) Butyryl cholinesterase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Butyryl cholinesterase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.85 E-value=1.5e-05 Score=66.54 Aligned_cols=120 Identities=11% Similarity=0.051 Sum_probs=72.8
Q ss_pred CCCceEEEEeCC--CCCCCcEEEeccCCCC---CCCC--CcccccCCCCcEEEEecCC----CCCCC-CCCCCCCccchH
Q 020064 30 SDIHTIYWEQSG--NPTGHPVVFLHGGPGG---GTTP--SNRRFFDPDFYRIILFDQR----GAGKS-TPHACLDQNTTW 97 (331)
Q Consensus 30 ~~g~~l~~~~~g--~~~~~~vl~~HG~~~~---~~~~--~~~~~~~~~g~~vi~~D~~----G~G~s-~~~~~~~~~~~~ 97 (331)
.|-..|..++-. ..+.|++|++|||+.. .... .........+.-||.+++| |+-.+ ........+-+.
T Consensus 87 EDCL~lnI~~P~~~~~~~PV~v~ihGG~~~~gs~~~~~~~~~~~~~~~~vVvVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~ 166 (526)
T d1p0ia_ 87 EDCLYLNVWIPAPKPKNATVLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFLALPGNPEAPGNMGLF 166 (526)
T ss_dssp SCCCEEEEEEESSCCSSEEEEEEECCSTTTSCCTTCGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCTTCTTSCSCHHHH
T ss_pred CcCCEEEEEeCCCCCCCCceEEEEECCCcccccCcccccCccccccccceeEEecccccccccccCCCCccccccccccc
Confidence 344455544322 1234789999996532 2221 1111122468999999999 33222 111222456777
Q ss_pred HHHHHHHHHHHHh---C--CCcEEEEEeChhHHHHHHHHHh--CCCceeeEEEeccccc
Q 020064 98 DLIDDIEKLRQHL---E--IPEWQVFGGSWGSTLALAYSLA--HPDKVTGLVLRGIFLL 149 (331)
Q Consensus 98 ~~~~~~~~~~~~~---~--~~~v~lvG~S~Gg~~a~~~a~~--~p~~v~~li~~~~~~~ 149 (331)
|+...++.+-+.+ | .++|.|+|+|.||..+..++.. ....+.++|+.++...
T Consensus 167 Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~~~sp~~~~lf~~aI~~Sg~~~ 225 (526)
T d1p0ia_ 167 DQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSFN 225 (526)
T ss_dssp HHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCTT
T ss_pred chhhhhhhHHHHHHHhhcCchheeehhhccccceeeccccCCcchhhhhhhhccccccc
Confidence 8887777776655 4 3489999999999988665543 2347889998886554
|
| >d2bcea_ c.69.1.1 (A:) Bile-salt activated lipase (cholesterol esterase) {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Bile-salt activated lipase (cholesterol esterase) species: Cow (Bos taurus) [TaxId: 9913]
Probab=97.82 E-value=1.1e-05 Score=68.00 Aligned_cols=105 Identities=14% Similarity=0.191 Sum_probs=66.6
Q ss_pred CCcEEEeccCC---CCCCCCC-------cccccC-CCCcEEEEecCC----CCCCCCCCCCCCccchHHHHHHHHHHHHH
Q 020064 45 GHPVVFLHGGP---GGGTTPS-------NRRFFD-PDFYRIILFDQR----GAGKSTPHACLDQNTTWDLIDDIEKLRQH 109 (331)
Q Consensus 45 ~~~vl~~HG~~---~~~~~~~-------~~~~~~-~~g~~vi~~D~~----G~G~s~~~~~~~~~~~~~~~~~~~~~~~~ 109 (331)
-|++|+||||+ ++..... ....++ ..+.-||.+++| |+-.+........+-+.|+...++.+-+.
T Consensus 98 lPV~V~iHGG~f~~Gs~~~~~~~~~~~~dg~~la~~~~vIvVt~nYRlg~~GFl~~~~~~~~gN~Gl~Dq~~AL~WV~~n 177 (579)
T d2bcea_ 98 LPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGPLGFLSTGDSNLPGNYGLWDQHMAIAWVKRN 177 (579)
T ss_dssp EEEEEECCCCSEEEC-------CTTGGGCCHHHHHHHTCEEEEECCCCHHHHHCCCSSTTCCCCHHHHHHHHHHHHHHHH
T ss_pred CcEEEEECCCcccCCCCCCcccCCccccchhhhhccCCEEEEeecccccccccccccccCCCccchhhHHHHHHHHHhhh
Confidence 37899999964 2221110 011122 246889999999 33222222222456788888888777666
Q ss_pred h---C--CCcEEEEEeChhHHHHHHHHHh--CCCceeeEEEeccccc
Q 020064 110 L---E--IPEWQVFGGSWGSTLALAYSLA--HPDKVTGLVLRGIFLL 149 (331)
Q Consensus 110 ~---~--~~~v~lvG~S~Gg~~a~~~a~~--~p~~v~~li~~~~~~~ 149 (331)
+ | .++|.|+|||.||..+..++.. ....+.++|+.++...
T Consensus 178 I~~FGGDP~~VTl~G~SAGa~sv~~~l~sp~~~gLF~raI~~SGs~~ 224 (579)
T d2bcea_ 178 IEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGVGL 224 (579)
T ss_dssp GGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESCCTT
T ss_pred hhhhccCcCceEeeecccccchhhhhhhhhcccCccccceeccCCcc
Confidence 5 3 3489999999999887766553 2457999999987543
|
| >d1ukca_ c.69.1.17 (A:) Esterase EstA {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Esterase EstA species: Aspergillus niger [TaxId: 5061]
Probab=97.74 E-value=1.5e-05 Score=66.24 Aligned_cols=120 Identities=16% Similarity=0.063 Sum_probs=72.0
Q ss_pred CCCceEEEEe-CCC-C--CCCcEEEeccCCC---CCCCCCcc--cccCCCCcEEEEecCC----CCCCCCC--CCCCCcc
Q 020064 30 SDIHTIYWEQ-SGN-P--TGHPVVFLHGGPG---GGTTPSNR--RFFDPDFYRIILFDQR----GAGKSTP--HACLDQN 94 (331)
Q Consensus 30 ~~g~~l~~~~-~g~-~--~~~~vl~~HG~~~---~~~~~~~~--~~~~~~g~~vi~~D~~----G~G~s~~--~~~~~~~ 94 (331)
.|-..|..+. ... . +-|++|++|||+- +...+... ......+.-||.+++| |+-.+.. ......+
T Consensus 78 EDCL~LnI~~P~~~~~~~~~PV~v~ihGG~~~~G~~~~~~~~~~~~~~~~~vVvVt~nYRlg~~GFl~~~~~~~~~~~N~ 157 (517)
T d1ukca_ 78 EDCLFINVFKPSTATSQSKLPVWLFIQGGGYAENSNANYNGTQVIQASDDVIVFVTFNYRVGALGFLASEKVRQNGDLNA 157 (517)
T ss_dssp SCCCEEEEEEETTCCTTCCEEEEEEECCSTTTSCCSCSCCCHHHHHHTTSCCEEEEECCCCHHHHHCCCHHHHHSSCTTH
T ss_pred CcCCEEEEEeCCCCCCCCCceEEEEEcCCccccCCCccccchhhhhhhccccceEEEEecccceeecCccccccccccch
Confidence 4555555544 221 1 2278999999642 22222211 1123467788999999 3322211 1111356
Q ss_pred chHHHHHHHHHHHHHh---C--CCcEEEEEeChhHHHHHHHHHh----CCCceeeEEEeccccc
Q 020064 95 TTWDLIDDIEKLRQHL---E--IPEWQVFGGSWGSTLALAYSLA----HPDKVTGLVLRGIFLL 149 (331)
Q Consensus 95 ~~~~~~~~~~~~~~~~---~--~~~v~lvG~S~Gg~~a~~~a~~----~p~~v~~li~~~~~~~ 149 (331)
-+.|+...++.+-+.+ | .++|.|+|+|.||..+...+.. ....+.++|+.++...
T Consensus 158 Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~s~~~~~~gLF~raI~qSg~~~ 221 (517)
T d1ukca_ 158 GLLDQRKALRWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFWP 221 (517)
T ss_dssp HHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCCCC
T ss_pred hHHHHHHHHHHHHHHHHhhcCCcccccccccccchhhHHHHHhccccccccccceeeecccccc
Confidence 6778877777776665 4 3489999999999877655433 2247999999987554
|
| >d1llfa_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Candida cylindracea, cholesterol esterase [TaxId: 44322]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Candida cylindracea, cholesterol esterase [TaxId: 44322]
Probab=97.72 E-value=3.1e-05 Score=64.63 Aligned_cols=119 Identities=13% Similarity=0.047 Sum_probs=71.0
Q ss_pred CCCceEEEEeC-C---CCCCCcEEEeccCCCC---CCCCCc---c--cccCCCCcEEEEecCC----CCCCCC--CCCCC
Q 020064 30 SDIHTIYWEQS-G---NPTGHPVVFLHGGPGG---GTTPSN---R--RFFDPDFYRIILFDQR----GAGKST--PHACL 91 (331)
Q Consensus 30 ~~g~~l~~~~~-g---~~~~~~vl~~HG~~~~---~~~~~~---~--~~~~~~g~~vi~~D~~----G~G~s~--~~~~~ 91 (331)
.|-..|..++- . ..+.|++|+||||+.. ...+.. . ..+..++.-||.+++| |+-... .....
T Consensus 95 EDCL~LnI~~P~~~~~~~~~PVlv~ihGG~f~~g~~~~~~~~~~~~~~~~~~~~vIvVt~nYRLg~~GFl~~~~~~~~~~ 174 (534)
T d1llfa_ 95 EDCLTINVVRPPGTKAGANLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGDDIKAEGS 174 (534)
T ss_dssp SCCCEEEEEECTTCCTTCCEEEEEEECCSTTTSCCGGGSCCHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHTC
T ss_pred CcCCEEEEEECCCCCCCCCCeEEEEECCCccccCCCCCCCchhccchhhhccCCeEEEEeecCCCcccccCCcccccccc
Confidence 45556665542 2 1234789999996532 221111 1 1234678999999999 332221 11111
Q ss_pred CccchHHHHHHHHHHHHHh---C--CCcEEEEEeChhHHHHHHHHH-hC----C---CceeeEEEecccc
Q 020064 92 DQNTTWDLIDDIEKLRQHL---E--IPEWQVFGGSWGSTLALAYSL-AH----P---DKVTGLVLRGIFL 148 (331)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~---~--~~~v~lvG~S~Gg~~a~~~a~-~~----p---~~v~~li~~~~~~ 148 (331)
..+-+.|+...++.+-+.+ | .++|.|+|+|.||..+..... .. | ..+.++|+.++..
T Consensus 175 gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SaGa~~v~~~l~~~~~~~sp~s~gLF~raI~qSGs~ 244 (534)
T d1llfa_ 175 GNAGLKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGAM 244 (534)
T ss_dssp TTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCCS
T ss_pred cccchhHHHHHHHHHHhhhhhhccCCcceeeeeecchHHHHHHHHhccccccccchhhhhhhhhhccCcc
Confidence 3456777777777766655 3 358999999999986654433 21 1 2589999998754
|
| >d1thga_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]
Probab=97.64 E-value=3.3e-05 Score=64.59 Aligned_cols=105 Identities=13% Similarity=0.017 Sum_probs=66.7
Q ss_pred CCcEEEeccCCCCCCC---CC---c--ccccCCCCcEEEEecCC----CCCCCCC--CCCCCccchHHHHHHHHHHHHHh
Q 020064 45 GHPVVFLHGGPGGGTT---PS---N--RRFFDPDFYRIILFDQR----GAGKSTP--HACLDQNTTWDLIDDIEKLRQHL 110 (331)
Q Consensus 45 ~~~vl~~HG~~~~~~~---~~---~--~~~~~~~g~~vi~~D~~----G~G~s~~--~~~~~~~~~~~~~~~~~~~~~~~ 110 (331)
-|++|++||++-.... +. . .......+.-||.+++| |+-.+.. ......+-+.|+...++.+-+.+
T Consensus 122 lPV~V~ihGG~f~~G~~~~~~~~~~~~~~~~~~~~vIvVt~nYRlg~~Gfl~~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI 201 (544)
T d1thga_ 122 LPVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYRTGPFGFLGGDAITAEGNTNAGLHDQRKGLEWVSDNI 201 (544)
T ss_dssp EEEEEEECCCTTCCSGGGGCCSHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHTCTTHHHHHHHHHHHHHHHHG
T ss_pred CCEEEEeccCCCccCCCccCCcchhhhhhhhccCCeEEEecccccccccccCCchhhccccccHHHHHhhhhhhhhhhhh
Confidence 3789999996543211 11 1 11224578999999999 3333211 10113566778777777776665
Q ss_pred ---C--CCcEEEEEeChhHHHHHHHHHhC--------CCceeeEEEeccccc
Q 020064 111 ---E--IPEWQVFGGSWGSTLALAYSLAH--------PDKVTGLVLRGIFLL 149 (331)
Q Consensus 111 ---~--~~~v~lvG~S~Gg~~a~~~a~~~--------p~~v~~li~~~~~~~ 149 (331)
| .++|.|+|+|.||..+..++... ...+.++|+.++...
T Consensus 202 ~~FGGDp~~VTl~G~SaGa~~v~~~l~sp~~~~~~~s~gLF~raI~qSG~~~ 253 (544)
T d1thga_ 202 ANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGGPL 253 (544)
T ss_dssp GGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCCCC
T ss_pred cccccCCCceEeeeeccchHHHHHHHhCcCCCcccchhhhhccccccccccc
Confidence 4 35899999999997666555432 247899999987543
|
| >d1dx4a_ c.69.1.1 (A:) Acetylcholinesterase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=97.54 E-value=4e-05 Score=64.49 Aligned_cols=105 Identities=17% Similarity=0.107 Sum_probs=66.1
Q ss_pred CCcEEEeccCCC---CCCC-CCcccccC-CCCcEEEEecCC----CCCCCC-------CCCCCCccchHHHHHHHHHHHH
Q 020064 45 GHPVVFLHGGPG---GGTT-PSNRRFFD-PDFYRIILFDQR----GAGKST-------PHACLDQNTTWDLIDDIEKLRQ 108 (331)
Q Consensus 45 ~~~vl~~HG~~~---~~~~-~~~~~~~~-~~g~~vi~~D~~----G~G~s~-------~~~~~~~~~~~~~~~~~~~~~~ 108 (331)
-|++|+||||+. +... ......++ +.+.-||.+++| |+-... .......+-+.|+...++.+-+
T Consensus 139 lPV~V~ihGG~f~~Gs~~~~~~~~~~l~~~~~vVvVtinYRlg~fGFl~~~~~~~~~~~~~~~gN~Gl~Dq~~AL~WV~~ 218 (571)
T d1dx4a_ 139 LPILIWIYGGGFMTGSATLDIYNADIMAAVGNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNVGLWDQALAIRWLKD 218 (571)
T ss_dssp EEEEEEECCSTTTCCCTTCGGGCCHHHHHHHTCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCccCCCCcccccchhhhhhcCCeeEEeecceeccccccccccccccccccCCCCcccchHHHHHHHHHHH
Confidence 378999999643 2222 11222232 346788899998 222110 1111235677788888777766
Q ss_pred Hh---C--CCcEEEEEeChhHHHHHHHHHhC--CCceeeEEEeccccc
Q 020064 109 HL---E--IPEWQVFGGSWGSTLALAYSLAH--PDKVTGLVLRGIFLL 149 (331)
Q Consensus 109 ~~---~--~~~v~lvG~S~Gg~~a~~~a~~~--p~~v~~li~~~~~~~ 149 (331)
.+ | .++|.|+|+|.||..+..++... ...+.++|+.++...
T Consensus 219 nI~~FGGDP~~VTl~G~SAGa~sv~~ll~sp~~~~lf~~aI~~Sg~~~ 266 (571)
T d1dx4a_ 219 NAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTMN 266 (571)
T ss_dssp STGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCCTT
T ss_pred hhhhhccCCCceEeccccCccceeeeeeccccccccccccceeccccc
Confidence 55 3 35899999999998887665542 346889998877554
|
| >d3tgla_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizomucor miehei [TaxId: 4839]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizomucor miehei [TaxId: 4839]
Probab=96.82 E-value=0.00099 Score=49.40 Aligned_cols=34 Identities=18% Similarity=0.158 Sum_probs=25.3
Q ss_pred HHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHh
Q 020064 100 IDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLA 133 (331)
Q Consensus 100 ~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~ 133 (331)
...+...++.....++++.|||+||.+|..+|..
T Consensus 119 ~~~i~~~~~~~~~~~i~vtGHSLGGAlA~L~a~~ 152 (265)
T d3tgla_ 119 VATVLDQFKQYPSYKVAVTGHSLGGATVLLCALD 152 (265)
T ss_dssp HHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCceEEEecccchHHHHHHHHHH
Confidence 3334444555566789999999999999988764
|
| >d1uwca_ c.69.1.17 (A:) Feruloyl esterase A {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Feruloyl esterase A species: Aspergillus niger [TaxId: 5061]
Probab=96.81 E-value=0.0028 Score=46.74 Aligned_cols=34 Identities=15% Similarity=0.085 Sum_probs=25.1
Q ss_pred HHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHh
Q 020064 100 IDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLA 133 (331)
Q Consensus 100 ~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~ 133 (331)
.+.+..+++.....++++.|||+||.+|..++..
T Consensus 112 ~~~i~~~~~~~~~~~i~vTGHSLGGAlA~L~a~~ 145 (261)
T d1uwca_ 112 ESLVKQQASQYPDYALTVTGHSLGASMAALTAAQ 145 (261)
T ss_dssp HHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCCCcceEEeccchhHHHHHHHHHH
Confidence 3344444455555689999999999999988765
|
| >d1lgya_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizopus niveus [TaxId: 4844]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizopus niveus [TaxId: 4844]
Probab=96.81 E-value=0.001 Score=49.29 Aligned_cols=31 Identities=19% Similarity=0.129 Sum_probs=23.5
Q ss_pred HHHHHHHhCCCcEEEEEeChhHHHHHHHHHh
Q 020064 103 IEKLRQHLEIPEWQVFGGSWGSTLALAYSLA 133 (331)
Q Consensus 103 ~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~ 133 (331)
+..+++.....++++.|||+||.+|..+|..
T Consensus 123 v~~~~~~~~~~~i~vtGHSLGGAlA~L~a~~ 153 (265)
T d1lgya_ 123 VQEQLTAHPTYKVIVTGHSLGGAQALLAGMD 153 (265)
T ss_dssp HHHHHHHCTTCEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHhhCCCceEEEEecccchHHHHHHHHH
Confidence 3344444455689999999999999988864
|
| >d1tiaa_ c.69.1.17 (A:) Triacylglycerol lipase {Penicillium camembertii [TaxId: 5075]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Penicillium camembertii [TaxId: 5075]
Probab=96.73 E-value=0.00095 Score=49.64 Aligned_cols=33 Identities=18% Similarity=0.167 Sum_probs=24.2
Q ss_pred HHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhC
Q 020064 102 DIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAH 134 (331)
Q Consensus 102 ~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~ 134 (331)
.+..+++.....++++.|||+||.+|..++...
T Consensus 126 ~i~~~~~~~~~~~i~iTGHSLGGAlA~L~a~~l 158 (271)
T d1tiaa_ 126 ELKEVVAQNPNYELVVVGHSLGAAVATLAATDL 158 (271)
T ss_pred HHHHHHHhCCCceEEEeccchHHHHHHHHHHHH
Confidence 334444444556899999999999999888753
|
| >d1tiba_ c.69.1.17 (A:) Triacylglycerol lipase {Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]
Probab=96.71 E-value=0.0013 Score=48.76 Aligned_cols=34 Identities=18% Similarity=0.066 Sum_probs=25.0
Q ss_pred HHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhC
Q 020064 101 DDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAH 134 (331)
Q Consensus 101 ~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~ 134 (331)
+.+..+++.....++++.|||+||.+|..++...
T Consensus 126 ~~v~~~~~~~~~~~i~vtGHSLGGalA~l~a~~l 159 (269)
T d1tiba_ 126 QKVEDAVREHPDYRVVFTGHSLGGALATVAGADL 159 (269)
T ss_dssp HHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCcceeeeccchHHHHHHHHHHHH
Confidence 3334444444556899999999999999998753
|
| >d1cexa_ c.69.1.30 (A:) Cutinase {Fungus (Fusarium solani), subsp. pisi [TaxId: 169388]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Cutinase species: Fungus (Fusarium solani), subsp. pisi [TaxId: 169388]
Probab=96.23 E-value=0.011 Score=41.28 Aligned_cols=53 Identities=23% Similarity=0.171 Sum_probs=42.4
Q ss_pred chHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCC----CceeeEEEeccc
Q 020064 95 TTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHP----DKVTGLVLRGIF 147 (331)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p----~~v~~li~~~~~ 147 (331)
....+...+.+..++....|++|+|+|.|+.++-.++...+ ++|.++++++-+
T Consensus 78 G~~~~~~~i~~~a~~CP~tkiVL~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfGDP 134 (197)
T d1cexa_ 78 AIREMLGLFQQANTKCPDATLIAGGYSQGAALAAASIEDLDSAIRDKIAGTVLFGYT 134 (197)
T ss_dssp HHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHSCHHHHTTEEEEEEESCT
T ss_pred HHHHHHHHHHHHHhhCCCCeEEEeeeccccHhhhcccccCChhhhhhEEEEEEEeCC
Confidence 34566677777777777789999999999999998887653 589999998854
|
| >d1qoza_ c.69.1.30 (A:) Acetylxylan esterase {Trichoderma reesei [TaxId: 51453]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Acetylxylan esterase species: Trichoderma reesei [TaxId: 51453]
Probab=94.86 E-value=0.025 Score=39.79 Aligned_cols=79 Identities=11% Similarity=-0.044 Sum_probs=48.6
Q ss_pred CCcEEEEecCCCCCCCCCCC-CCCccc----hHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhC----------
Q 020064 70 DFYRIILFDQRGAGKSTPHA-CLDQNT----TWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAH---------- 134 (331)
Q Consensus 70 ~g~~vi~~D~~G~G~s~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~---------- 134 (331)
.+-.+..+++|..-...... .....+ ..++...+....++....+++|+|+|.|+.++-.++..-
T Consensus 34 ~~~~~~~v~YPA~~~~~~~~~~~y~~S~~~G~~~~~~~i~~~~~~CP~tkivl~GYSQGA~V~~~~l~~~g~~~~~~~~~ 113 (207)
T d1qoza_ 34 PGTTSEAIVYPACGGQASCGGISYANSVVNGTNAAAAAINNFHNSCPDTQLVLVGYSQGAQIFDNALCGGGDPGEGITNT 113 (207)
T ss_dssp TTEEEEECCSCCCSSCGGGTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHCSCBGGGTBCCC
T ss_pred CCCeEEEeeecccccccccccccchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEeeccchHHHHHHHhccCccccccccC
Confidence 46677888888753321111 001112 233455555555565667999999999999998887431
Q ss_pred --------CCceeeEEEecccc
Q 020064 135 --------PDKVTGLVLRGIFL 148 (331)
Q Consensus 135 --------p~~v~~li~~~~~~ 148 (331)
.++|.++++++-+.
T Consensus 114 ~~~l~~~~~~~V~avvl~GdP~ 135 (207)
T d1qoza_ 114 AVPLTAGAVSAVKAAIFMGDPR 135 (207)
T ss_dssp SCCSCHHHHHHEEEEEEESCTT
T ss_pred CCCCChhhhhcEEEEEEEeCCC
Confidence 13688888887443
|
| >d1g66a_ c.69.1.30 (A:) Acetylxylan esterase {Penicillium purpurogenum [TaxId: 28575]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Acetylxylan esterase species: Penicillium purpurogenum [TaxId: 28575]
Probab=94.29 E-value=0.043 Score=38.57 Aligned_cols=79 Identities=8% Similarity=0.013 Sum_probs=47.1
Q ss_pred CCcEEEEecCCCCCCCCC-CCCCCccchH----HHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhC----------
Q 020064 70 DFYRIILFDQRGAGKSTP-HACLDQNTTW----DLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAH---------- 134 (331)
Q Consensus 70 ~g~~vi~~D~~G~G~s~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~---------- 134 (331)
.+-.+..+++|....... .......+.. .+...+.+..++....+++|+|+|.|+.++-.++..-
T Consensus 34 ~~~~~~~v~YpA~~~~~~~~~~~y~~Sv~~G~~~~~~~i~~~~~~CP~tk~vl~GYSQGA~V~~~~l~~~g~~~~~~~~~ 113 (207)
T d1g66a_ 34 PGSTAEAINYPACGGQSSCGGASYSSSVAQGIAAVASAVNSFNSQCPSTKIVLVGYSQGGEIMDVALCGGGDPNQGYTNT 113 (207)
T ss_dssp TTCEEEECCCCCCSSCGGGTSCCHHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEEETHHHHHHHHHHHCSCBGGGTBCCC
T ss_pred CCCeeEEecccccccccccccccccccHHHHHHHHHHHHHHHHHhCCCCcEEEEeeccccHHHHHHHhccCCcccccccc
Confidence 356778888886432211 1100111222 3444444455555667999999999999998876421
Q ss_pred --------CCceeeEEEecccc
Q 020064 135 --------PDKVTGLVLRGIFL 148 (331)
Q Consensus 135 --------p~~v~~li~~~~~~ 148 (331)
.++|.++++++-+.
T Consensus 114 ~~~l~~~~~~~v~avvl~GdP~ 135 (207)
T d1g66a_ 114 AVQLSSSAVNMVKAAIFMGDPM 135 (207)
T ss_dssp SCCSCHHHHHHEEEEEEESCTT
T ss_pred ccCCCchhhhceeeEEEecCCC
Confidence 13688888887543
|
| >d1b74a1 c.78.2.1 (A:1-105) Glutamate racemase {Aquifex pyrophilus [TaxId: 2714]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ATC-like superfamily: Aspartate/glutamate racemase family: Aspartate/glutamate racemase domain: Glutamate racemase species: Aquifex pyrophilus [TaxId: 2714]
Probab=82.51 E-value=1.5 Score=26.42 Aligned_cols=44 Identities=5% Similarity=0.057 Sum_probs=34.5
Q ss_pred cchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHh
Q 020064 283 MSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNL 326 (331)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 326 (331)
...+++.+.+|+.+++.+-+..|+++-++..+++.+.+.+..+.
T Consensus 14 tVl~~l~~~lP~~~~iY~~D~a~~PYG~ks~~~I~~~~~~~~~~ 57 (105)
T d1b74a1 14 TVLKAIRNRYRKVDIVYLGDTARVPYGIRSKDTIIRYSLECAGF 57 (105)
T ss_dssp HHHHHHHHHSSSCEEEEEECGGGCCGGGSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCEEEEecCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 45678889999999999999999999877677666666555443
|