BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020065
(331 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255545042|ref|XP_002513582.1| polypyrimidine tract binding protein, putative [Ricinus communis]
gi|223547490|gb|EEF48985.1| polypyrimidine tract binding protein, putative [Ricinus communis]
Length = 447
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 265/329 (80%), Positives = 282/329 (85%), Gaps = 9/329 (2%)
Query: 7 LLKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPE 66
L+ + + VFSAFGFVHKITTFEKTAGFQALVQFSD ETASSAKNALDGR+IPRYLLPE
Sbjct: 124 LVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRNIPRYLLPE 183
Query: 67 NMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPES 126
++GPCTLRITYSAHTDLSVKFQSHRSRDYTNP LPVAPSAID SG +VGLDGKKLEPES
Sbjct: 184 HIGPCTLRITYSAHTDLSVKFQSHRSRDYTNPNLPVAPSAIDGSGMFTVGLDGKKLEPES 243
Query: 127 NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEAL 186
NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEAL
Sbjct: 244 NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEAL 303
Query: 187 EGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGA 246
EGHCIYDGGFCKLHISYSRH+DLSIKVNNDRSRDYT+P+ MVN QPSILGQQPVP VG
Sbjct: 304 EGHCIYDGGFCKLHISYSRHSDLSIKVNNDRSRDYTIPNPAMVNPQPSILGQQPVPTVGP 363
Query: 247 TANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQSM-PMMGNHPYMPPGSMP--MGPG 303
A+ Y+GAQFA P E P+M QP+A AVP SM P M NHPY P G+MP MGPG
Sbjct: 364 PAHPYSGAQFA-PHTEHPVMPQPSAGWTAAVPAGPHSMPPQMNNHPYFPSGAMPPQMGPG 422
Query: 304 MMQMHMPGQSGMQHHHGA-MPPPRPDHMQ 331
MMQ MPG +G+Q GA MPP RP MQ
Sbjct: 423 MMQ--MPGHTGIQ--QGAPMPPYRPGQMQ 447
>gi|118488039|gb|ABK95840.1| unknown [Populus trichocarpa]
Length = 442
Score = 486 bits (1250), Expect = e-135, Method: Compositional matrix adjust.
Identities = 253/328 (77%), Positives = 272/328 (82%), Gaps = 12/328 (3%)
Query: 7 LLKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPE 66
L+ + + VFSAFGFVHKITTFEKTAGFQALVQFSD ETASSAKNALDGR+IP YLLPE
Sbjct: 124 LVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRNIPSYLLPE 183
Query: 67 NMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPES 126
++GPCTLRITYSAHTDLSVKFQSHRSRDYTN LPVAPSAIDA+G SVGLDGKKLEPES
Sbjct: 184 HLGPCTLRITYSAHTDLSVKFQSHRSRDYTNANLPVAPSAIDANGMFSVGLDGKKLEPES 243
Query: 127 NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEAL 186
NVLLASIENMQYAVTLDVLHMVFS+FGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEAL
Sbjct: 244 NVLLASIENMQYAVTLDVLHMVFSSFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEAL 303
Query: 187 EGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGA 246
EGHCIYDGGFCKLH+SYSRH+DLSIKVNNDRSRDYT+P+T M+N QPSILGQQPV G
Sbjct: 304 EGHCIYDGGFCKLHLSYSRHSDLSIKVNNDRSRDYTIPNTVMMNPQPSILGQQPVATHGP 363
Query: 247 TANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMP-MMGNHPYMPPGSMP--MGPG 303
A+ Y GAQ MM QP+A PP SMP M N+PY+PPG+MP MG G
Sbjct: 364 PAHTYPGAQ------HHQMMPQPSAGWATGGPPVPHSMPAQMNNNPYLPPGTMPPQMGHG 417
Query: 304 MMQMHMPGQSGMQHHHGAMPPPRPDHMQ 331
MMQ MP G+ H AMPP RP HMQ
Sbjct: 418 MMQ--MPNHGGLP-HAPAMPPYRPGHMQ 442
>gi|224135279|ref|XP_002322027.1| predicted protein [Populus trichocarpa]
gi|222869023|gb|EEF06154.1| predicted protein [Populus trichocarpa]
Length = 447
Score = 479 bits (1233), Expect = e-133, Method: Compositional matrix adjust.
Identities = 248/328 (75%), Positives = 268/328 (81%), Gaps = 7/328 (2%)
Query: 7 LLKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPE 66
L+ + + VFSAFGFVHKITTFEK FQALVQFSD ETASSAKNALDGR+IP YLLPE
Sbjct: 124 LVSIDVLHLVFSAFGFVHKITTFEKMDRFQALVQFSDVETASSAKNALDGRNIPSYLLPE 183
Query: 67 NMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPES 126
++GPCTLRI YS HTDLSVKFQSHRSRDYTNP LPVA SAIDA+G S+GLDGKKLEPES
Sbjct: 184 HLGPCTLRIAYSGHTDLSVKFQSHRSRDYTNPNLPVAQSAIDANGMFSMGLDGKKLEPES 243
Query: 127 NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEAL 186
NVLLASIENMQYAVTLDVLHMVFS+FGPVQKIAMFDKN GLQALIQYPDVQTAVVAKEAL
Sbjct: 244 NVLLASIENMQYAVTLDVLHMVFSSFGPVQKIAMFDKNSGLQALIQYPDVQTAVVAKEAL 303
Query: 187 EGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGA 246
EGHCIYDGGFCKLH+SYSRH DLSIKVNNDRSRDYT+P+ MVN QPSILGQQPV G
Sbjct: 304 EGHCIYDGGFCKLHLSYSRHNDLSIKVNNDRSRDYTIPNNVMVNPQPSILGQQPVATHGP 363
Query: 247 TANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMP-MMGNHPYMPPGSMP--MGPG 303
++ Y GAQFA P E M+ QP++ PP SMP M N+PY+PPG+MP MG G
Sbjct: 364 PSHLYTGAQFA-PTTEHSMIPQPSSGWATGFPPVPNSMPGQMNNNPYLPPGTMPPQMGHG 422
Query: 304 MMQMHMPGQSGMQHHHGAMPPPRPDHMQ 331
MMQ MP G H H AMPP RP HMQ
Sbjct: 423 MMQ--MPSHGGPPHTH-AMPPYRPYHMQ 447
>gi|359490453|ref|XP_003634092.1| PREDICTED: polypyrimidine tract-binding protein homolog 2-like
[Vitis vinifera]
Length = 446
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 241/326 (73%), Positives = 274/326 (84%), Gaps = 14/326 (4%)
Query: 7 LLKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPE 66
L+ + + VFSAFGFVHKITTFEKTAGFQALVQFSD+ETAS+AKNALDGRSIPRYLLPE
Sbjct: 124 LVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDSETASAAKNALDGRSIPRYLLPE 183
Query: 67 NMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPES 126
++GPCTLRIT+SAHTDLSVKFQSHRSRDYTNPYLPVA SAID SGQ S+G DG+K+EPES
Sbjct: 184 HLGPCTLRITFSAHTDLSVKFQSHRSRDYTNPYLPVASSAIDGSGQFSMGFDGRKVEPES 243
Query: 127 NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEAL 186
NVLLASIENMQYAVTLDVLHMVFSAFGP+QKIAMFDKNGG+QALIQYPDVQTA+VAKEAL
Sbjct: 244 NVLLASIENMQYAVTLDVLHMVFSAFGPIQKIAMFDKNGGVQALIQYPDVQTAIVAKEAL 303
Query: 187 EGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGA 246
EGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT +P+++SQPS+LGQQPVP+ G
Sbjct: 304 EGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT---SPVLSSQPSVLGQQPVPIPGP 360
Query: 247 TANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMPMMG--------NHPYMPPGSM 298
+ +Q+ GAQ+A P +QP++HQP+ AGW A+ + P NHPYMPPG+M
Sbjct: 361 STHQFEGAQYA-SPSDQPVIHQPS-AGWATSAAAAGAPPPPPQSMPMQQHNHPYMPPGTM 418
Query: 299 PMGPGMMQMHMPGQSGMQHHHGAMPP 324
P P M M Q+G+ AMPP
Sbjct: 419 PPQPVPGMMPMQTQTGLP-QSAAMPP 443
>gi|147804914|emb|CAN66869.1| hypothetical protein VITISV_013673 [Vitis vinifera]
Length = 755
Score = 476 bits (1226), Expect = e-132, Method: Compositional matrix adjust.
Identities = 240/317 (75%), Positives = 268/317 (84%), Gaps = 14/317 (4%)
Query: 16 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 75
VFSAFGFVHKITTFEKTAGFQALVQFSD+ETAS+AKNALDGRSIPRYLLPE++GPCTLRI
Sbjct: 442 VFSAFGFVHKITTFEKTAGFQALVQFSDSETASAAKNALDGRSIPRYLLPEHLGPCTLRI 501
Query: 76 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 135
T+SAHTDLSVKFQSHRSRDYTNPYLPVA SAID SGQ S+G DG+K+EPESNVLLASIEN
Sbjct: 502 TFSAHTDLSVKFQSHRSRDYTNPYLPVASSAIDGSGQFSMGFDGRKVEPESNVLLASIEN 561
Query: 136 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 195
MQYAVTLDVLHMVFSAFGP+QKIAMFDKNGG+QALIQYPDVQTA+VAKEALEGHCIYDGG
Sbjct: 562 MQYAVTLDVLHMVFSAFGPIQKIAMFDKNGGVQALIQYPDVQTAIVAKEALEGHCIYDGG 621
Query: 196 FCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQYNGAQ 255
FCKLHISYSRHTDLSIKVNNDRSRDYT +P+++SQPS+LGQQPVP+ G + +Q+ GAQ
Sbjct: 622 FCKLHISYSRHTDLSIKVNNDRSRDYT---SPVLSSQPSVLGQQPVPIPGPSTHQFEGAQ 678
Query: 256 FAPPPPEQPMMHQPTAAGWGA--------VPPASQSMPMMGNHPYMPPGSMPMGPGMMQM 307
+A P +QP++HQP+ AGW PP NHPYMPPG+MP P M
Sbjct: 679 YA-SPSDQPVIHQPS-AGWATSAAAAGAPPPPPQSMPMQQHNHPYMPPGTMPPQPVPGMM 736
Query: 308 HMPGQSGMQHHHGAMPP 324
M Q+G+ AMPP
Sbjct: 737 PMQTQTGLP-QSAAMPP 752
>gi|356509289|ref|XP_003523383.1| PREDICTED: polypyrimidine tract-binding protein homolog 2-like
[Glycine max]
Length = 433
Score = 476 bits (1224), Expect = e-132, Method: Compositional matrix adjust.
Identities = 238/303 (78%), Positives = 256/303 (84%), Gaps = 21/303 (6%)
Query: 7 LLKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPE 66
L+ + + VFSAFGFVHKITTFEKTAGFQALVQFSD ETA+SAK+ALDGRSIPRYLLPE
Sbjct: 124 LVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETATSAKDALDGRSIPRYLLPE 183
Query: 67 NMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPES 126
+MGPCTLRITYS H+DLSVKFQSHRSRDYTNPYLPVAPSA++ SGQ VGLDGK+LE ES
Sbjct: 184 HMGPCTLRITYSGHSDLSVKFQSHRSRDYTNPYLPVAPSAVEGSGQAMVGLDGKRLEAES 243
Query: 127 NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEAL 186
NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQ+PD QTAVVAKEAL
Sbjct: 244 NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQFPDTQTAVVAKEAL 303
Query: 187 EGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGA 246
EGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT+P+TP VN QPSILGQQ VPM+G
Sbjct: 304 EGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNTPAVNVQPSILGQQSVPMMGP 363
Query: 247 TANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPAS--QSMPM-MGNHPYMPPGSMP--MG 301
YNG+Q AGWG PPA+ QSMPM M N+ YMP G+MP M
Sbjct: 364 PQQPYNGSQ----------------AGWGTAPPATTVQSMPMQMHNNVYMPSGTMPQQMA 407
Query: 302 PGM 304
PGM
Sbjct: 408 PGM 410
>gi|356516021|ref|XP_003526695.1| PREDICTED: polypyrimidine tract-binding protein homolog 2-like
[Glycine max]
Length = 432
Score = 472 bits (1215), Expect = e-131, Method: Compositional matrix adjust.
Identities = 234/302 (77%), Positives = 257/302 (85%), Gaps = 20/302 (6%)
Query: 7 LLKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPE 66
L+ + + VFSAFGFVHKITTFEKTAGFQALVQFSD ETA+SAK+ALDGRSIPRYLLPE
Sbjct: 124 LVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETATSAKDALDGRSIPRYLLPE 183
Query: 67 NMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPES 126
++GPCTLRITYS H+DLSVKFQSHRSRDYTNPYLPVAPSA++ SGQ VGLDGK+LE ES
Sbjct: 184 HVGPCTLRITYSGHSDLSVKFQSHRSRDYTNPYLPVAPSAVEGSGQAMVGLDGKRLETES 243
Query: 127 NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEAL 186
NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPD QTAVVAKEAL
Sbjct: 244 NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDTQTAVVAKEAL 303
Query: 187 EGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGA 246
EGHCIYDGGFCKLH+SYSRHTDLSIKVNNDRSRDYT+P+TP+VN+QPSI GQQ V M+G
Sbjct: 304 EGHCIYDGGFCKLHLSYSRHTDLSIKVNNDRSRDYTIPNTPIVNAQPSIFGQQSVSMMGP 363
Query: 247 TANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPAS-QSMPM-MGNHPYMPPGSMP--MGP 302
+ + G+Q AGWG PPA+ QSMPM M N+ YMPPG+MP M P
Sbjct: 364 SQQPFYGSQ----------------AGWGTAPPAAVQSMPMQMHNNVYMPPGTMPQQMAP 407
Query: 303 GM 304
GM
Sbjct: 408 GM 409
>gi|357463843|ref|XP_003602203.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
gi|355491251|gb|AES72454.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
Length = 828
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 239/311 (76%), Positives = 263/311 (84%), Gaps = 6/311 (1%)
Query: 16 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 75
VFSAFGFVHKITTFEKTAGFQALVQFSD ETA+SAK+ALDGRSIPRYLL E++GPCTL+I
Sbjct: 457 VFSAFGFVHKITTFEKTAGFQALVQFSDAETATSAKDALDGRSIPRYLLSEHVGPCTLKI 516
Query: 76 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 135
TYS H+DL+VKFQSHRSRDYTNPYLPVA SAI+ GQ+ +GLDGK+LE ESNVLLASIEN
Sbjct: 517 TYSGHSDLTVKFQSHRSRDYTNPYLPVAQSAIEGGGQVMIGLDGKRLEAESNVLLASIEN 576
Query: 136 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 195
MQYAVTLDVLHMVFSAFGP+QKIAMFDKNGGLQALIQYPD QTAVVAKEALEGHCIYDGG
Sbjct: 577 MQYAVTLDVLHMVFSAFGPIQKIAMFDKNGGLQALIQYPDTQTAVVAKEALEGHCIYDGG 636
Query: 196 FCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQYNGAQ 255
FCKLH+SYSRHTDLSIKVNNDRSRDYT+P P+VN+QPSILG QPVPM A QYNG+Q
Sbjct: 637 FCKLHLSYSRHTDLSIKVNNDRSRDYTIPMIPVVNTQPSILG-QPVPMTVPPAQQYNGSQ 695
Query: 256 FAPPPPEQPMMHQPTAAGWG-AVPPASQSMPM-MGNHPYMPPGSMPMGPGMMQMHMPGQS 313
+ P P M + AGWG +P +QSMP+ M N+ YMP G+MP G G MQM PG
Sbjct: 696 YT--PISDPAMIPQSQAGWGTTLPTVAQSMPLQMHNNIYMPAGNMPPGNGPMQMQ-PGNG 752
Query: 314 GMQHHHGAMPP 324
MQ G MPP
Sbjct: 753 PMQMPPGNMPP 763
>gi|449456492|ref|XP_004145983.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
[Cucumis sativus]
Length = 776
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 249/337 (73%), Positives = 276/337 (81%), Gaps = 19/337 (5%)
Query: 7 LLKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPE 66
L+ + + VFSAFGFVHKITTFEKTAGFQALVQFSD ETASSAKNALDGRSIPRYLLP+
Sbjct: 447 LVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYLLPD 506
Query: 67 NMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPES 126
++GPC+LRITYSAHTDL+VKFQSHRSRDYTNPYLPVAPSAID SGQ +VGLDGKKLEPES
Sbjct: 507 HVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTVGLDGKKLEPES 566
Query: 127 NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEAL 186
NVLLASIENMQYAVTL+VLHMVFSAFGPVQKIAMFDKNGG+QALIQYPDVQTAVVAKEAL
Sbjct: 567 NVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTAVVAKEAL 626
Query: 187 EGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPST-PMVNSQPSILGQQPVP--- 242
EGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT+P+ PMVNSQP ++GQ P
Sbjct: 627 EGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQPPVVGQGPGQGQG 686
Query: 243 ------MVGATANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPAS--QSMPMMGNHPYMP 294
M+G + +QYNG Q+ P +QP + P ++GWG+ PA+ SMPM N YMP
Sbjct: 687 QQPPHQMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGPAATYSSMPMH-NPGYMP 745
Query: 295 PGSMPMGPGMMQMHMPGQSGMQHHHGAMPPPRPDHMQ 331
G+MP GM MP SG+ H PP RPDH Q
Sbjct: 746 SGTMPPQHGM----MPSPSGL--HQTPPPPYRPDHRQ 776
>gi|363807178|ref|NP_001242348.1| uncharacterized protein LOC100810102 [Glycine max]
gi|255645249|gb|ACU23122.1| unknown [Glycine max]
Length = 428
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 235/302 (77%), Positives = 258/302 (85%), Gaps = 8/302 (2%)
Query: 7 LLKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPE 66
L+ + + VFSAFGFVHKITTFEKTAGFQALVQFSD ETA+SAK+ALDGRSIPRYLLPE
Sbjct: 124 LVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETATSAKDALDGRSIPRYLLPE 183
Query: 67 NMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPES 126
+MGPC+L+ITYS H+DLSVKFQSHRSRDYTNPYLPVA SA++ SGQ VGLDGK+LE ES
Sbjct: 184 HMGPCSLKITYSGHSDLSVKFQSHRSRDYTNPYLPVAQSAMEGSGQPMVGLDGKRLEAES 243
Query: 127 NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEAL 186
NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPD+QTAVVAKEAL
Sbjct: 244 NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDIQTAVVAKEAL 303
Query: 187 EGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPST--PMVNSQPSILGQQPVPMV 244
EGHCIYDGGFCKLHISYSRH+DLSIKVNNDRSRDYT+P+ P+VN+QPSILGQ PVPM
Sbjct: 304 EGHCIYDGGFCKLHISYSRHSDLSIKVNNDRSRDYTIPNVPPPVVNAQPSILGQHPVPMT 363
Query: 245 GATANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMPMMGNHPYMPPGSMP--MGP 302
G QYNGAQ+A EQ +M Q + AGWG P SQSM M N+PY P +P P
Sbjct: 364 GPPPQQYNGAQYA-SVTEQTLMPQ-SQAGWGTAP--SQSMLQMHNNPYTPSAMVPPQTAP 419
Query: 303 GM 304
GM
Sbjct: 420 GM 421
>gi|356546193|ref|XP_003541515.1| PREDICTED: polypyrimidine tract-binding protein homolog 2-like
[Glycine max]
Length = 428
Score = 462 bits (1190), Expect = e-128, Method: Compositional matrix adjust.
Identities = 231/302 (76%), Positives = 253/302 (83%), Gaps = 8/302 (2%)
Query: 7 LLKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPE 66
L+ + + VFSAFGFVHKITTFEKTAGFQALVQFSD ETA+SAK+ALDGRSIPRYLLPE
Sbjct: 124 LVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETATSAKDALDGRSIPRYLLPE 183
Query: 67 NMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPES 126
++GPC L+ITYS H+DLSVKFQSHRSRDYTNPYLPVA SA++ SGQ VGLDGK+LE ES
Sbjct: 184 HIGPCGLKITYSGHSDLSVKFQSHRSRDYTNPYLPVAQSAMEGSGQPMVGLDGKRLEAES 243
Query: 127 NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEAL 186
NVLLASIENMQY VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPD+QTAVVAKE L
Sbjct: 244 NVLLASIENMQYTVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDIQTAVVAKETL 303
Query: 187 EGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPST--PMVNSQPSILGQQPVPMV 244
EGHCIYDGGFCKLHISYSRHTDLSIKVNN+RSRDYT+P+ P+VN+QPSILGQ PVPM
Sbjct: 304 EGHCIYDGGFCKLHISYSRHTDLSIKVNNERSRDYTIPNVPPPVVNAQPSILGQHPVPMT 363
Query: 245 GATANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMPMMGNHPYMPPGSMP--MGP 302
G YNGAQ+AP + M H + AGWG PP QSM M NHPY P +P P
Sbjct: 364 GPPPQHYNGAQYAPVTEQTLMSH--SQAGWGTGPP--QSMQQMHNHPYTPSAMVPPQTTP 419
Query: 303 GM 304
GM
Sbjct: 420 GM 421
>gi|449522938|ref|XP_004168482.1| PREDICTED: polypyrimidine tract-binding protein homolog 2-like
[Cucumis sativus]
Length = 457
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 249/341 (73%), Positives = 276/341 (80%), Gaps = 23/341 (6%)
Query: 7 LLKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPE 66
L+ + + VFSAFGFVHKITTFEKTAGFQALVQFSD ETASSAKNALDGRSIPRYLLP+
Sbjct: 124 LVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYLLPD 183
Query: 67 NMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQ----LSVGLDGKKL 122
++GPC+LRITYSAHTDL+VKFQSHRSRDYTNPYLPVAPSAID SGQ +VGLDGKKL
Sbjct: 184 HVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQSSLQFTVGLDGKKL 243
Query: 123 EPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVA 182
EPESNVLLASIENMQYAVTL+VLHMVFSAFGPVQKIAMFDKNGG+QALIQYPDVQTAVVA
Sbjct: 244 EPESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTAVVA 303
Query: 183 KEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPST-PMVNSQPSILGQQPV 241
KEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT+P+ PMVNSQP ++GQ P
Sbjct: 304 KEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQPPVVGQGPG 363
Query: 242 P---------MVGATANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPAS--QSMPMMGNH 290
M+G + +QYNG Q+ P +QP + P ++GWG+ PA+ SMPM N
Sbjct: 364 QGQGQQPPHQMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGPAATYSSMPMH-NP 422
Query: 291 PYMPPGSMPMGPGMMQMHMPGQSGMQHHHGAMPPPRPDHMQ 331
YMP G+MP GM MP SG+ H PP RPDH Q
Sbjct: 423 GYMPSGTMPPQHGM----MPSPSGL--HQTPPPPYRPDHRQ 457
>gi|302143674|emb|CBI22535.3| unnamed protein product [Vitis vinifera]
Length = 1311
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 207/244 (84%), Positives = 229/244 (93%), Gaps = 3/244 (1%)
Query: 7 LLKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPE 66
L+ + + VFSAFGFVHKITTFEKTAGFQALVQFSD+ETAS+AKNALDGRSIPRYLLPE
Sbjct: 124 LVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDSETASAAKNALDGRSIPRYLLPE 183
Query: 67 NMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPES 126
++GPCTLRIT+SAHTDLSVKFQSHRSRDYTNPYLPVA SAID SGQ S+G DG+K+EPES
Sbjct: 184 HLGPCTLRITFSAHTDLSVKFQSHRSRDYTNPYLPVASSAIDGSGQFSMGFDGRKVEPES 243
Query: 127 NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEAL 186
NVLLASIENMQYAVTLDVLHMVFSAFGP+QKIAMFDKNGG+QALIQYPDVQTA+VAKEAL
Sbjct: 244 NVLLASIENMQYAVTLDVLHMVFSAFGPIQKIAMFDKNGGVQALIQYPDVQTAIVAKEAL 303
Query: 187 EGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGA 246
EGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT +P+++SQPS+LGQQPVP+ G
Sbjct: 304 EGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT---SPVLSSQPSVLGQQPVPIPGP 360
Query: 247 TANQ 250
+ +Q
Sbjct: 361 STHQ 364
>gi|224118178|ref|XP_002317750.1| predicted protein [Populus trichocarpa]
gi|222858423|gb|EEE95970.1| predicted protein [Populus trichocarpa]
Length = 350
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 208/226 (92%), Positives = 218/226 (96%)
Query: 16 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 75
VFSAFGFVHKITTFEKTAGFQALVQFSD ETASSAKNALDGR+IP YLLPE++GPCTLRI
Sbjct: 124 VFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRNIPSYLLPEHLGPCTLRI 183
Query: 76 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 135
TYSAHTDLSVKFQSHRSRDYTN LPVAPSAIDA+G SVGLDGKKLEPESNVLLASIEN
Sbjct: 184 TYSAHTDLSVKFQSHRSRDYTNANLPVAPSAIDANGMFSVGLDGKKLEPESNVLLASIEN 243
Query: 136 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 195
MQYAVTLDVLHMVFS+FGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG
Sbjct: 244 MQYAVTLDVLHMVFSSFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 303
Query: 196 FCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPV 241
FCKLH+SYSRH+DLSIKVNNDRSRDYT+P+T M+N QPSILGQQPV
Sbjct: 304 FCKLHLSYSRHSDLSIKVNNDRSRDYTIPNTVMMNPQPSILGQQPV 349
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/109 (50%), Positives = 69/109 (63%), Gaps = 7/109 (6%)
Query: 127 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
NVLL +IE V++DVLH+VFSAFG V KI F+K G QAL+Q+ D +TA AK A
Sbjct: 102 NVLLVTIEGADARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNA 161
Query: 186 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 228
L+G I G C L I+YS HTDLS+K + RSRDYT + P+
Sbjct: 162 LDGRNIPSYLLPEHLGPCTLRITYSAHTDLSVKFQSHRSRDYTNANLPV 210
>gi|297796143|ref|XP_002865956.1| hypothetical protein ARALYDRAFT_495390 [Arabidopsis lyrata subsp.
lyrata]
gi|297311791|gb|EFH42215.1| hypothetical protein ARALYDRAFT_495390 [Arabidopsis lyrata subsp.
lyrata]
Length = 426
Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust.
Identities = 188/213 (88%), Positives = 206/213 (96%)
Query: 16 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 75
VFSAFGFVHKITTFEKTAG+QALVQFSD ETA+SAKNALDGRSIPRYLL E +G C+L+I
Sbjct: 133 VFSAFGFVHKITTFEKTAGYQALVQFSDEETATSAKNALDGRSIPRYLLAEQVGQCSLKI 192
Query: 76 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 135
TYSAHTDL+VKFQSHRSRDYTNPYLP+APSAID++GQ++VG+DGKK+EPESNVLLASIEN
Sbjct: 193 TYSAHTDLTVKFQSHRSRDYTNPYLPIAPSAIDSTGQVAVGVDGKKMEPESNVLLASIEN 252
Query: 136 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 195
MQYAVTLDVLHMVF+AFG VQKIAMFDKNGGLQALIQY DVQTAVVAKEALEGHCIYDGG
Sbjct: 253 MQYAVTLDVLHMVFAAFGDVQKIAMFDKNGGLQALIQYKDVQTAVVAKEALEGHCIYDGG 312
Query: 196 FCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 228
FCKLHI+YSRHTDLSIKVNNDRSRDYT+P+ P+
Sbjct: 313 FCKLHITYSRHTDLSIKVNNDRSRDYTMPNPPV 345
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 59/126 (46%), Positives = 75/126 (59%), Gaps = 7/126 (5%)
Query: 127 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
NVLL ++E V++DVLH+VFSAFG V KI F+K G QAL+Q+ D +TA AK A
Sbjct: 111 NVLLVTVEGEDARMVSIDVLHLVFSAFGFVHKITTFEKTAGYQALVQFSDEETATSAKNA 170
Query: 186 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQ 239
L+G I G C L I+YS HTDL++K + RSRDYT P P+ S GQ
Sbjct: 171 LDGRSIPRYLLAEQVGQCSLKITYSAHTDLTVKFQSHRSRDYTNPYLPIAPSAIDSTGQV 230
Query: 240 PVPMVG 245
V + G
Sbjct: 231 AVGVDG 236
>gi|145334809|ref|NP_001078750.1| polypyrimidine tract-binding protein 2 [Arabidopsis thaliana]
gi|110737620|dbj|BAF00751.1| polypyrimidine tract-binding RNA transport protein-like
[Arabidopsis thaliana]
gi|332008936|gb|AED96319.1| polypyrimidine tract-binding protein 2 [Arabidopsis thaliana]
Length = 329
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 183/208 (87%), Positives = 200/208 (96%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
VFSAFGFVHKITTFEKTAG+QALVQF+D ETA++AK ALDGRSIPRYLL E +G C+L+
Sbjct: 32 HVFSAFGFVHKITTFEKTAGYQALVQFTDAETATAAKLALDGRSIPRYLLAETVGQCSLK 91
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIE 134
ITYSAHTDL+VKFQSHRSRDYTNPYLPVAPSAID++GQ++VG+DGKK+EPESNVLLASIE
Sbjct: 92 ITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDSTGQVAVGVDGKKMEPESNVLLASIE 151
Query: 135 NMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDG 194
NMQYAVTLDVLHMVF+AFG VQKIAMFDKNGG+QALIQY DVQTAVVAKEALEGHCIYDG
Sbjct: 152 NMQYAVTLDVLHMVFAAFGEVQKIAMFDKNGGVQALIQYSDVQTAVVAKEALEGHCIYDG 211
Query: 195 GFCKLHISYSRHTDLSIKVNNDRSRDYT 222
GFCKLHI+YSRHTDLSIKVNNDRSRDYT
Sbjct: 212 GFCKLHITYSRHTDLSIKVNNDRSRDYT 239
>gi|15238677|ref|NP_200130.1| polypyrimidine tract-binding protein 2 [Arabidopsis thaliana]
gi|75333813|sp|Q9FGL9.1|PTBP2_ARATH RecName: Full=Polypyrimidine tract-binding protein homolog 2
gi|9757999|dbj|BAB08421.1| polypyrimidine tract-binding RNA transport protein-like
[Arabidopsis thaliana]
gi|53749130|gb|AAU90050.1| At5g53180 [Arabidopsis thaliana]
gi|55733737|gb|AAV59265.1| At5g53180 [Arabidopsis thaliana]
gi|332008935|gb|AED96318.1| polypyrimidine tract-binding protein 2 [Arabidopsis thaliana]
Length = 429
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 183/207 (88%), Positives = 200/207 (96%)
Query: 16 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 75
VFSAFGFVHKITTFEKTAG+QALVQF+D ETA++AK ALDGRSIPRYLL E +G C+L+I
Sbjct: 133 VFSAFGFVHKITTFEKTAGYQALVQFTDAETATAAKLALDGRSIPRYLLAETVGQCSLKI 192
Query: 76 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 135
TYSAHTDL+VKFQSHRSRDYTNPYLPVAPSAID++GQ++VG+DGKK+EPESNVLLASIEN
Sbjct: 193 TYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDSTGQVAVGVDGKKMEPESNVLLASIEN 252
Query: 136 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 195
MQYAVTLDVLHMVF+AFG VQKIAMFDKNGG+QALIQY DVQTAVVAKEALEGHCIYDGG
Sbjct: 253 MQYAVTLDVLHMVFAAFGEVQKIAMFDKNGGVQALIQYSDVQTAVVAKEALEGHCIYDGG 312
Query: 196 FCKLHISYSRHTDLSIKVNNDRSRDYT 222
FCKLHI+YSRHTDLSIKVNNDRSRDYT
Sbjct: 313 FCKLHITYSRHTDLSIKVNNDRSRDYT 339
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/126 (47%), Positives = 76/126 (60%), Gaps = 7/126 (5%)
Query: 127 NVLLASIE-NMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
NVLL +IE + V++DVLH+VFSAFG V KI F+K G QAL+Q+ D +TA AK A
Sbjct: 111 NVLLVTIEGDDARMVSIDVLHLVFSAFGFVHKITTFEKTAGYQALVQFTDAETATAAKLA 170
Query: 186 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQ 239
L+G I G C L I+YS HTDL++K + RSRDYT P P+ S GQ
Sbjct: 171 LDGRSIPRYLLAETVGQCSLKITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDSTGQV 230
Query: 240 PVPMVG 245
V + G
Sbjct: 231 AVGVDG 236
>gi|294463038|gb|ADE77057.1| unknown [Picea sitchensis]
Length = 528
Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust.
Identities = 191/264 (72%), Positives = 216/264 (81%), Gaps = 4/264 (1%)
Query: 16 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 75
VFSAFGFVHKI TFEK+AGFQALVQFSD TA+SAKNALDGRSIPRYLLPE++G C+LRI
Sbjct: 133 VFSAFGFVHKIATFEKSAGFQALVQFSDPNTATSAKNALDGRSIPRYLLPEHVGLCSLRI 192
Query: 76 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 135
T+SAH DL+VKFQSHRSRDYTNPYLPVAPSAID +GQ +G DGK+ EPESNVLLASIEN
Sbjct: 193 TFSAHNDLNVKFQSHRSRDYTNPYLPVAPSAIDGTGQFGIGPDGKRREPESNVLLASIEN 252
Query: 136 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 195
MQYAVTLDVL VF+AFG VQKIA+F+KN G QALIQYPDV TAV AKEALEGHCIYDGG
Sbjct: 253 MQYAVTLDVLRSVFTAFGTVQKIAIFEKNAGFQALIQYPDVATAVTAKEALEGHCIYDGG 312
Query: 196 FCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQYNGAQ 255
FCKLH+SYSRHTDL++KVNNDRSRDYT P+ ++ +Q SILGQQP T + G Q
Sbjct: 313 FCKLHLSYSRHTDLNVKVNNDRSRDYTSPNPGLLPNQLSILGQQPSAFQ-TTVSAVGGMQ 371
Query: 256 FAPPPPEQPMMHQPTAAGWGAVPP 279
P +++ GA+PP
Sbjct: 372 V---PQSSSLVYSGNNYAGGALPP 392
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/120 (48%), Positives = 75/120 (62%), Gaps = 7/120 (5%)
Query: 126 SNVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 184
SNVLL +IE ++ V++DVLH+VFSAFG V KIA F+K+ G QAL+Q+ D TA AK
Sbjct: 110 SNVLLVTIEGVEAGDVSIDVLHLVFSAFGFVHKIATFEKSAGFQALVQFSDPNTATSAKN 169
Query: 185 ALEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 238
AL+G I G C L I++S H DL++K + RSRDYT P P+ S GQ
Sbjct: 170 ALDGRSIPRYLLPEHVGLCSLRITFSAHNDLNVKFQSHRSRDYTNPYLPVAPSAIDGTGQ 229
>gi|168027197|ref|XP_001766117.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682760|gb|EDQ69176.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 488
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 210/334 (62%), Positives = 240/334 (71%), Gaps = 42/334 (12%)
Query: 16 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 75
VFSAFGFVHKI TFEK+AGFQALVQFSD TAS+AK+AL+GRSIPRYLLP+++GPC LRI
Sbjct: 133 VFSAFGFVHKIATFEKSAGFQALVQFSDANTASAAKSALEGRSIPRYLLPDHVGPCHLRI 192
Query: 76 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 135
++SAH DL+VKFQSHRSRDYTNPYLPVAPSAID SGQ SVG DGK+ EPESNVLL SIEN
Sbjct: 193 SFSAHNDLNVKFQSHRSRDYTNPYLPVAPSAIDGSGQFSVGPDGKRREPESNVLLVSIEN 252
Query: 136 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 195
MQYAVT+DV+H VFSAFG VQKIA+F+K+ G QAL+QYPD+ TAV AKEALEGHCIYDGG
Sbjct: 253 MQYAVTIDVIHTVFSAFGFVQKIAIFEKSAGFQALVQYPDIPTAVGAKEALEGHCIYDGG 312
Query: 196 FCKLHISYSRHTDLSIK------VNNDRSRDYT---LPST--PMVNSQPSILGQQPVPMV 244
FCKLH+SYSRHTDL++K VNNDRSRDYT LP+T P+++ P + QQ
Sbjct: 313 FCKLHLSYSRHTDLNVKALSLLYVNNDRSRDYTNPGLPATQPPVLSQAPGVAQQQSWDTE 372
Query: 245 GATANQYNGAQFAPPPPEQP------MMHQ----------PTAAGWGAVPPA--SQSMPM 286
G+ Q Q + P P QP M HQ P A+G PP + PM
Sbjct: 373 GSGKAQ----QVSGPMPGQPMSGPMYMSHQHGGAVGHHGPPGASGSYQGPPGPVTSMGPM 428
Query: 287 MGNHPYM-PPGSMPMGPGMMQMHMPGQSGMQHHH 319
G P M PPG MGPGM Q G Q HH
Sbjct: 429 SGPGPSMAPPGY--MGPGMHQQ------GQQSHH 454
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/120 (50%), Positives = 75/120 (62%), Gaps = 7/120 (5%)
Query: 126 SNVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 184
SNVLL +IE ++ V++DVLH+VFSAFG V KIA F+K+ G QAL+Q+ D TA AK
Sbjct: 110 SNVLLVTIEGVEAGDVSIDVLHLVFSAFGFVHKIATFEKSAGFQALVQFSDANTASAAKS 169
Query: 185 ALEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 238
ALEG I G C L IS+S H DL++K + RSRDYT P P+ S GQ
Sbjct: 170 ALEGRSIPRYLLPDHVGPCHLRISFSAHNDLNVKFQSHRSRDYTNPYLPVAPSAIDGSGQ 229
>gi|294461640|gb|ADE76380.1| unknown [Picea sitchensis]
Length = 511
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 177/225 (78%), Positives = 201/225 (89%)
Query: 16 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 75
VFSAFGFVHKI TFEK+AGFQALVQFSD +TASSA++ALDGRSIPRYLL E++GPC LRI
Sbjct: 133 VFSAFGFVHKIATFEKSAGFQALVQFSDVDTASSARSALDGRSIPRYLLAEHVGPCHLRI 192
Query: 76 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 135
++SAHTDL+VKFQSHRSRDYTNP LPVAPSAID +GQ +G DG++ EP SNVLLASIEN
Sbjct: 193 SFSAHTDLNVKFQSHRSRDYTNPNLPVAPSAIDGTGQFGIGPDGQRREPASNVLLASIEN 252
Query: 136 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 195
MQYAVT+DVLH VFSAFG VQKIAMF+KN G QALIQY D+ TAV+AKEALEGH IY GG
Sbjct: 253 MQYAVTVDVLHTVFSAFGIVQKIAMFEKNAGWQALIQYADIPTAVIAKEALEGHFIYAGG 312
Query: 196 FCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQP 240
+CKLH+SYSRHTDL++KVNNDRSRDYTLP ++ +Q SILGQQP
Sbjct: 313 YCKLHLSYSRHTDLNVKVNNDRSRDYTLPKVGILQNQLSILGQQP 357
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/120 (50%), Positives = 78/120 (65%), Gaps = 7/120 (5%)
Query: 126 SNVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 184
SNVLL +IE ++ V++DVLH+VFSAFG V KIA F+K+ G QAL+Q+ DV TA A+
Sbjct: 110 SNVLLVTIEGVEAGDVSIDVLHLVFSAFGFVHKIATFEKSAGFQALVQFSDVDTASSARS 169
Query: 185 ALEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 238
AL+G I G C L IS+S HTDL++K + RSRDYT P+ P+ S GQ
Sbjct: 170 ALDGRSIPRYLLAEHVGPCHLRISFSAHTDLNVKFQSHRSRDYTNPNLPVAPSAIDGTGQ 229
>gi|168060645|ref|XP_001782305.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666235|gb|EDQ52895.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 348
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 172/212 (81%), Positives = 193/212 (91%)
Query: 16 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 75
VFSAFGFVHKI TFEK+AGFQALVQFSD TAS+AK+AL+GRSIPRYLLP+++GPC LRI
Sbjct: 133 VFSAFGFVHKIATFEKSAGFQALVQFSDANTASAAKSALEGRSIPRYLLPDHVGPCHLRI 192
Query: 76 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 135
++SAH DL+VKFQSHRSRDYTNPYLPVAPSAID SGQ SVG DGK+ EPESNVLL SIEN
Sbjct: 193 SFSAHNDLNVKFQSHRSRDYTNPYLPVAPSAIDGSGQFSVGPDGKRREPESNVLLVSIEN 252
Query: 136 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 195
MQYAVT+DV+H VFSAFG VQKIA+F+K+ G QAL+QYPD+ TAV AKEALEGHCIYDGG
Sbjct: 253 MQYAVTIDVIHTVFSAFGFVQKIAIFEKSAGFQALVQYPDIPTAVGAKEALEGHCIYDGG 312
Query: 196 FCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
FCKLH+SYSRHTDL++KVNNDRSRDYT P P
Sbjct: 313 FCKLHLSYSRHTDLNVKVNNDRSRDYTNPGLP 344
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/110 (51%), Positives = 72/110 (65%), Gaps = 7/110 (6%)
Query: 126 SNVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 184
SNVLL +IE ++ V++DVLH+VFSAFG V KIA F+K+ G QAL+Q+ D TA AK
Sbjct: 110 SNVLLVTIEGVEAGDVSIDVLHLVFSAFGFVHKIATFEKSAGFQALVQFSDANTASAAKS 169
Query: 185 ALEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 228
ALEG I G C L IS+S H DL++K + RSRDYT P P+
Sbjct: 170 ALEGRSIPRYLLPDHVGPCHLRISFSAHNDLNVKFQSHRSRDYTNPYLPV 219
>gi|225452859|ref|XP_002283748.1| PREDICTED: polypyrimidine tract-binding protein homolog 1 isoform 1
[Vitis vinifera]
gi|296082938|emb|CBI22239.3| unnamed protein product [Vitis vinifera]
Length = 449
Score = 369 bits (947), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 196/330 (59%), Positives = 233/330 (70%), Gaps = 19/330 (5%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ + I VFSAFGFVHKI TFEK AGFQAL+QF+D ETASSA+NALDGRSIPRYLLPE+
Sbjct: 124 VSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQFTDAETASSARNALDGRSIPRYLLPEH 183
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN 127
+G C LRI+YSAHTDL++KFQSHRSRDYTNPYLPV P+AI+ Q ++G DGKK EPESN
Sbjct: 184 VGSCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPTAIEGIAQPALGPDGKKKEPESN 243
Query: 128 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 187
VLLASIENMQYAVT+DVLH VFSAFG VQKIA+F+KNGG+QALIQYPDV TA VAKEALE
Sbjct: 244 VLLASIENMQYAVTVDVLHTVFSAFGTVQKIAIFEKNGGMQALIQYPDVTTAAVAKEALE 303
Query: 188 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQ-------PSILGQQP 240
GHCIYDGG+CKLH+SYSRHTDL++K ++DRSRDYT+P + ++ Q + + Q P
Sbjct: 304 GHCIYDGGYCKLHLSYSRHTDLNVKAHSDRSRDYTIPDSGLLAVQQAPGHPGATTVWQNP 363
Query: 241 VPMVGATANQYNGAQFAPPPPEQPMM---HQPTAAGWGAVPPASQSMPMMGNHPYMPPGS 297
T + A P P M A+ A P + + +P PPGS
Sbjct: 364 QAAPLYTGHDAAAAAAVQVPSWDPNMQAGRSTFASAASAFPSQPFASSSISAYP-APPGS 422
Query: 298 MPMGPGMMQMHMPGQSGMQHHHGAMPPPRP 327
P+ P + PG GA PP RP
Sbjct: 423 SPLTPAVPPNVRPG--------GASPPGRP 444
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/109 (52%), Positives = 72/109 (66%), Gaps = 7/109 (6%)
Query: 127 NVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
NVLL +IE ++ V++DV+H+VFSAFG V KIA F+K G QALIQ+ D +TA A+ A
Sbjct: 110 NVLLVTIEGVEAGDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQFTDAETASSARNA 169
Query: 186 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 228
L+G I G C L ISYS HTDL+IK + RSRDYT P P+
Sbjct: 170 LDGRSIPRYLLPEHVGSCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPV 218
>gi|118488224|gb|ABK95931.1| unknown [Populus trichocarpa]
Length = 473
Score = 368 bits (944), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 199/346 (57%), Positives = 235/346 (67%), Gaps = 26/346 (7%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ + I VFSAFG++HKI TFEK AGFQAL+QF+D+ETASSA+NALDGRSIPRYLLPE+
Sbjct: 124 VSIDVIHLVFSAFGYLHKIATFEKAAGFQALIQFTDSETASSARNALDGRSIPRYLLPEH 183
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN 127
+G C LRI+YSAHTDL++KFQSHRSRDYTNPYLPV P+AI+ Q +VG DGKK EPESN
Sbjct: 184 VGSCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPTAIEGPVQPTVGADGKKKEPESN 243
Query: 128 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 187
VLLASIENMQYAVT+DVLH VFSAFG VQKIA+F+KNGG QALIQYPDV TA VAKE LE
Sbjct: 244 VLLASIENMQYAVTIDVLHTVFSAFGTVQKIAIFEKNGGTQALIQYPDVATAAVAKETLE 303
Query: 188 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPV----PM 243
GHCIYDGG+CKLH+SYSRHTDL++K +D+SRDYT+P ++ +Q L P P
Sbjct: 304 GHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTIPDASLIAAQAPGLHTAPTMWQNPQ 363
Query: 244 VGA--TANQYNGAQFAP---PPPEQPMMH---QPTAAGWGAVPPA--SQSMPMMGNHPY- 292
G+ T N Y P PP + P Q G+ +VP Q+ P Y
Sbjct: 364 AGSMYTGNNYATTAAVPVQVPPGQVPAWDPTMQAGGQGYASVPGTYPGQTYPTPPASAYA 423
Query: 293 ---MPPGSMPM--------GPGMMQMHMPGQSGMQHHHGAMPPPRP 327
+P GS P M M PG GA PP +P
Sbjct: 424 TAAIPAGSSPRSHSSPISHSVASMAMSHPGMQSNLRPSGASPPGQP 469
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/131 (46%), Positives = 80/131 (61%), Gaps = 10/131 (7%)
Query: 127 NVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
NVLL +IE ++ V++DV+H+VFSAFG + KIA F+K G QALIQ+ D +TA A+ A
Sbjct: 110 NVLLVTIEGVEAGDVSIDVIHLVFSAFGYLHKIATFEKAAGFQALIQFTDSETASSARNA 169
Query: 186 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQ 239
L+G I G C L ISYS HTDL+IK + RSRDYT P P+ P+ +
Sbjct: 170 LDGRSIPRYLLPEHVGSCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPV---NPTAIEGP 226
Query: 240 PVPMVGATANQ 250
P VGA +
Sbjct: 227 VQPTVGADGKK 237
>gi|116787007|gb|ABK24339.1| unknown [Picea sitchensis]
Length = 491
Score = 367 bits (942), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 173/221 (78%), Positives = 200/221 (90%)
Query: 16 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 75
VFSAFGFVHKI TFEKTAGFQALVQFSD +TA+SA++ALDGRSIPRYLLPE++ C LRI
Sbjct: 133 VFSAFGFVHKIATFEKTAGFQALVQFSDADTAASARSALDGRSIPRYLLPEHVASCHLRI 192
Query: 76 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 135
++SAHTDL+VKFQSHRSRDYTNP LPV PSAID +GQ +VG DGK+ E ESNVLLASIEN
Sbjct: 193 SFSAHTDLNVKFQSHRSRDYTNPNLPVNPSAIDGAGQFTVGPDGKRRELESNVLLASIEN 252
Query: 136 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 195
MQYAVT+DVL+ VFSAFG VQKIA+F+KNGG QALIQYPD+ TAV+AKEALEGHCIYDGG
Sbjct: 253 MQYAVTVDVLNTVFSAFGRVQKIAIFEKNGGFQALIQYPDIATAVLAKEALEGHCIYDGG 312
Query: 196 FCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSIL 236
+CKLH+SYSRHTDL++K NNDRSRDYT+P++ M+ +QP L
Sbjct: 313 YCKLHLSYSRHTDLNVKGNNDRSRDYTIPASGMLPAQPPSL 353
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 71/110 (64%), Gaps = 7/110 (6%)
Query: 126 SNVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 184
SNVLL +IE + V++DVLH+VFSAFG V KIA F+K G QAL+Q+ D TA A+
Sbjct: 110 SNVLLVTIEGVDSGDVSIDVLHLVFSAFGFVHKIATFEKTAGFQALVQFSDADTAASARS 169
Query: 185 ALEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 228
AL+G I C L IS+S HTDL++K + RSRDYT P+ P+
Sbjct: 170 ALDGRSIPRYLLPEHVASCHLRISFSAHTDLNVKFQSHRSRDYTNPNLPV 219
>gi|302789199|ref|XP_002976368.1| hypothetical protein SELMODRAFT_104811 [Selaginella moellendorffii]
gi|302811042|ref|XP_002987211.1| hypothetical protein SELMODRAFT_125500 [Selaginella moellendorffii]
gi|300145108|gb|EFJ11787.1| hypothetical protein SELMODRAFT_125500 [Selaginella moellendorffii]
gi|300155998|gb|EFJ22628.1| hypothetical protein SELMODRAFT_104811 [Selaginella moellendorffii]
Length = 440
Score = 363 bits (933), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 172/226 (76%), Positives = 197/226 (87%), Gaps = 7/226 (3%)
Query: 16 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 75
VFSAFGFVHKI TFEKTAGFQALVQFSD TAS+A+ ALDGRSIPRYLLPE++G C LRI
Sbjct: 133 VFSAFGFVHKIATFEKTAGFQALVQFSDANTASAARQALDGRSIPRYLLPEHVGSCHLRI 192
Query: 76 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDA-SGQLSVGLDGKKLEPESNVLLASIE 134
++SAHTDL+VKFQSHRSRDYTNPYLPVAPSAI+ S + + G DGK+ EPESNVLLASIE
Sbjct: 193 SFSAHTDLNVKFQSHRSRDYTNPYLPVAPSAINGISQEYTTGPDGKRKEPESNVLLASIE 252
Query: 135 NMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDG 194
NMQY+VT+DVLH VF+AFGP+QKIA+F+KN G QALIQY DV TAV AKEALEGHCIY+G
Sbjct: 253 NMQYSVTIDVLHTVFAAFGPIQKIAIFEKNAGFQALIQYADVTTAVAAKEALEGHCIYEG 312
Query: 195 GFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQP 240
G+CKLH+SYSRHTDL++KVNNDRSRDYT + PS+LG+ P
Sbjct: 313 GYCKLHLSYSRHTDLNVKVNNDRSRDYT------SSQSPSVLGKAP 352
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/121 (47%), Positives = 78/121 (64%), Gaps = 7/121 (5%)
Query: 126 SNVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 184
SNVLL +IE ++ V++DVLH+VFSAFG V KIA F+K G QAL+Q+ D TA A++
Sbjct: 110 SNVLLVTIEGVEAGDVSIDVLHLVFSAFGFVHKIATFEKTAGFQALVQFSDANTASAARQ 169
Query: 185 ALEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 238
AL+G I G C L IS+S HTDL++K + RSRDYT P P+ S + + Q
Sbjct: 170 ALDGRSIPRYLLPEHVGSCHLRISFSAHTDLNVKFQSHRSRDYTNPYLPVAPSAINGISQ 229
Query: 239 Q 239
+
Sbjct: 230 E 230
>gi|224141415|ref|XP_002324068.1| predicted protein [Populus trichocarpa]
gi|222867070|gb|EEF04201.1| predicted protein [Populus trichocarpa]
Length = 476
Score = 355 bits (912), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 197/347 (56%), Positives = 229/347 (65%), Gaps = 32/347 (9%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIP----RYL 63
+ + I VFSAFG+VHKI TFEK AGFQAL+QF+D ETASSA+NALDGR+I RYL
Sbjct: 124 VSIDVIHLVFSAFGYVHKIATFEKAAGFQALIQFTDAETASSARNALDGRNIMFKKFRYL 183
Query: 64 LPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLE 123
LPE++G C LRI+YSAHTDL++KFQSHRSRDYTNPYLPV P+AID Q +VG DGKK E
Sbjct: 184 LPEHVGSCNLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPTAIDGPVQSTVGADGKKKE 243
Query: 124 PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAK 183
PESNVLLASIENMQYAVT+DVLH VFS FG VQKIA+F+KNGG QALIQYPDV TA VAK
Sbjct: 244 PESNVLLASIENMQYAVTVDVLHTVFSGFGTVQKIAIFEKNGGTQALIQYPDVATAAVAK 303
Query: 184 EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPM 243
E LEGHCIYDGG+CKLH+SYSRHTDL++K +D+SRDYT+P + +Q L P
Sbjct: 304 ETLEGHCIYDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTIPDASFLTAQAPGLHTAPTTW 363
Query: 244 VGATANQ-YNGAQFAPP-------PPEQPMMHQPTAAGWGAVPPASQSMPMMGNHPY--- 292
A Y G+ +A PP Q P+ G P S M Y
Sbjct: 364 QNPQAGSMYLGSNYATTAAAPAQVPPGQVAAWDPSMQAGG--PGYSSVRGMYPGQTYPTP 421
Query: 293 -------MPPG------SMPMGPGMMQMHM--PGQSGMQHHHGAMPP 324
+PPG S P+ PG+ M M PG GA PP
Sbjct: 422 PAYASSALPPGSSPHSYSSPISPGVASMGMTHPGVQPNMRPGGASPP 468
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/113 (50%), Positives = 72/113 (63%), Gaps = 11/113 (9%)
Query: 127 NVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
NVLL +IE ++ V++DV+H+VFSAFG V KIA F+K G QALIQ+ D +TA A+ A
Sbjct: 110 NVLLVTIEGVEAGDVSIDVIHLVFSAFGYVHKIATFEKAAGFQALIQFTDAETASSARNA 169
Query: 186 LEGHCIYDGGF----------CKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 228
L+G I F C L ISYS HTDL+IK + RSRDYT P P+
Sbjct: 170 LDGRNIMFKKFRYLLPEHVGSCNLRISYSAHTDLNIKFQSHRSRDYTNPYLPV 222
>gi|218201199|gb|EEC83626.1| hypothetical protein OsI_29352 [Oryza sativa Indica Group]
Length = 461
Score = 355 bits (912), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 184/308 (59%), Positives = 222/308 (72%), Gaps = 22/308 (7%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ + I VFSAFGFVHKI TFEK AGFQAL+Q++D TA AKN+LDGRSIPRYLLPE+
Sbjct: 124 ISIDVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDAPTALEAKNSLDGRSIPRYLLPEH 183
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN 127
+ C LRIT+SAH DL++KFQSHRSRDYTNPYLPV P+AI+ Q ++G DGK EPESN
Sbjct: 184 VPTCHLRITFSAHKDLNIKFQSHRSRDYTNPYLPVNPTAIEGIAQPTLGPDGKIKEPESN 243
Query: 128 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 187
VLLASIENMQYAVT+DVLH VFSAFG VQKIAMF+KNGG+QALIQYPD+ TA VAK+ALE
Sbjct: 244 VLLASIENMQYAVTVDVLHTVFSAFGTVQKIAMFEKNGGMQALIQYPDITTAAVAKQALE 303
Query: 188 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVN----------SQPSILG 237
GHCIYDGG+CKLH+SYSRHTDL++K +++RSRDYT+ S P S P +
Sbjct: 304 GHCIYDGGYCKLHLSYSRHTDLNVKAHDERSRDYTVSSDPSAQMQAAAQAPGPSTPGVAW 363
Query: 238 QQPVPMVGATANQYNGAQFAPPPPEQPMMHQPTAAG-WGAVPPASQSMPMMGNHPYMPPG 296
Q P +A+ Y A P + P + AG +G+ A + PMM PG
Sbjct: 364 QNTAP----SASFYGSTAAATPVGQVPAWNPNMQAGAFGSASSAYTTQPMM-------PG 412
Query: 297 SMPMGPGM 304
S+P PG+
Sbjct: 413 SVPHYPGI 420
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 53/109 (48%), Positives = 69/109 (63%), Gaps = 7/109 (6%)
Query: 127 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
NVLL + E +Q +++DV+H+VFSAFG V KIA F+K G QALIQY D TA+ AK +
Sbjct: 110 NVLLVTFEGVQPNDISIDVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDAPTALEAKNS 169
Query: 186 LEGHCIYDGGF------CKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 228
L+G I C L I++S H DL+IK + RSRDYT P P+
Sbjct: 170 LDGRSIPRYLLPEHVPTCHLRITFSAHKDLNIKFQSHRSRDYTNPYLPV 218
>gi|115476578|ref|NP_001061885.1| Os08g0436000 [Oryza sativa Japonica Group]
gi|42407521|dbj|BAD10638.1| putative polypyrimidine tract-binding protein homolog [Oryza sativa
Japonica Group]
gi|113623854|dbj|BAF23799.1| Os08g0436000 [Oryza sativa Japonica Group]
gi|215695278|dbj|BAG90469.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222640621|gb|EEE68753.1| hypothetical protein OsJ_27445 [Oryza sativa Japonica Group]
Length = 461
Score = 354 bits (909), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 184/308 (59%), Positives = 222/308 (72%), Gaps = 22/308 (7%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ + I VFSAFGFVHKI TFEK AGFQAL+Q++D TA AKN+LDGRSIPRYLLPE+
Sbjct: 124 ISIDVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDAPTALEAKNSLDGRSIPRYLLPEH 183
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN 127
+ C LRIT+SAH DL++KFQSHRSRDYTNPYLPV P+AI+ Q ++G DGK EPESN
Sbjct: 184 VPTCHLRITFSAHKDLNIKFQSHRSRDYTNPYLPVNPTAIEGIAQPTLGPDGKIKEPESN 243
Query: 128 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 187
VLLASIENMQYAVT+DVLH VFSAFG VQKIAMF+KNGG+QALIQYPD+ TA VAK+ALE
Sbjct: 244 VLLASIENMQYAVTVDVLHTVFSAFGTVQKIAMFEKNGGMQALIQYPDITTAAVAKQALE 303
Query: 188 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVN----------SQPSILG 237
GHCIYDGG+CKLH+SYSRHTDL++K +++RSRDYT+ S P S P +
Sbjct: 304 GHCIYDGGYCKLHLSYSRHTDLNVKAHDERSRDYTVSSDPSAQMQAAAQAPGPSTPGVAW 363
Query: 238 QQPVPMVGATANQYNGAQFAPPPPEQPMMHQPTAAG-WGAVPPASQSMPMMGNHPYMPPG 296
Q P +A+ Y A P + P + AG +G+ A + PMM PG
Sbjct: 364 QNTAP----SASFYGSTAAATPVGQVPAWNPNMQAGAFGSASSAYPTQPMM-------PG 412
Query: 297 SMPMGPGM 304
S+P PG+
Sbjct: 413 SVPHYPGI 420
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 53/109 (48%), Positives = 69/109 (63%), Gaps = 7/109 (6%)
Query: 127 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
NVLL + E +Q +++DV+H+VFSAFG V KIA F+K G QALIQY D TA+ AK +
Sbjct: 110 NVLLVTFEGVQPNDISIDVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDAPTALEAKNS 169
Query: 186 LEGHCIYDGGF------CKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 228
L+G I C L I++S H DL+IK + RSRDYT P P+
Sbjct: 170 LDGRSIPRYLLPEHVPTCHLRITFSAHKDLNIKFQSHRSRDYTNPYLPV 218
>gi|413922343|gb|AFW62275.1| hypothetical protein ZEAMMB73_137441 [Zea mays]
Length = 462
Score = 351 bits (900), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 184/303 (60%), Positives = 221/303 (72%), Gaps = 25/303 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
++VI + VFSAFGFVHKI TFEK AGFQAL+Q++D TA AKN+LDGRSIP+YLLPE+
Sbjct: 126 IEVIHL--VFSAFGFVHKIATFEKAAGFQALIQYTDAPTALEAKNSLDGRSIPKYLLPEH 183
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN 127
+ C +RIT+SAH DL++KFQSHRSRDYTNPYLPV +AI+ Q +VG DGK EPESN
Sbjct: 184 ISACHMRITFSAHKDLNIKFQSHRSRDYTNPYLPVNQTAIEGIVQPTVGPDGKIKEPESN 243
Query: 128 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 187
VLLASIENMQYAVT+DVLH VFSAFG VQKIAMF+KNGG+QALIQYPD+ TA VAK+ALE
Sbjct: 244 VLLASIENMQYAVTVDVLHTVFSAFGAVQKIAMFEKNGGMQALIQYPDITTAAVAKQALE 303
Query: 188 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS----------TPMVNSQPSILG 237
GHCIYDGG+CKLH+SYSRHTDL++K ++DRSRDYTL P+++S P +
Sbjct: 304 GHCIYDGGYCKLHLSYSRHTDLNVKAHDDRSRDYTLSDPNAQLQAAAQAPVISS-PGVAW 362
Query: 238 QQP-----VPMVGATANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMPMMGNH-P 291
Q P P G+TA Q PP P M P G+ + A + P+M N P
Sbjct: 363 QNPASAPAAPFYGSTAASTPVGQ---PPAWNPNMQAP---GFASASTAYPNPPLMANSTP 416
Query: 292 YMP 294
Y P
Sbjct: 417 YYP 419
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/118 (47%), Positives = 74/118 (62%), Gaps = 9/118 (7%)
Query: 127 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
NVLL + E +Q VT++V+H+VFSAFG V KIA F+K G QALIQY D TA+ AK +
Sbjct: 110 NVLLVTFEGVQPNDVTIEVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDAPTALEAKNS 169
Query: 186 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILG 237
L+G I C + I++S H DL+IK + RSRDYT P P+ +Q +I G
Sbjct: 170 LDGRSIPKYLLPEHISACHMRITFSAHKDLNIKFQSHRSRDYTNPYLPV--NQTAIEG 225
>gi|54290862|dbj|BAD61523.1| polypyrimidine tract-binding protein 1-like [Oryza sativa Japonica
Group]
gi|125571201|gb|EAZ12716.1| hypothetical protein OsJ_02633 [Oryza sativa Japonica Group]
gi|215740848|dbj|BAG97004.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 554
Score = 351 bits (900), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 185/290 (63%), Positives = 214/290 (73%), Gaps = 25/290 (8%)
Query: 16 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 75
VFSAFGFV KI TFEK +G+QAL+QF DTETASSAK ALDGR IP YLLPE PCTLRI
Sbjct: 131 VFSAFGFVQKIATFEKASGYQALIQFCDTETASSAKAALDGRCIPSYLLPELDVPCTLRI 190
Query: 76 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 135
YSAHT L+VKFQSHRSRDYTNPYLPVAPSAID SG DGKK E ESNVLLAS+EN
Sbjct: 191 NYSAHTVLNVKFQSHRSRDYTNPYLPVAPSAIDGSGP-----DGKKQEAESNVLLASVEN 245
Query: 136 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 195
MQY VT+DVLH VFSAFG VQKIA+F+KN G QALIQYPD+QTAV AKEALEGH IY+GG
Sbjct: 246 MQYVVTIDVLHEVFSAFGFVQKIAIFEKNSGFQALIQYPDIQTAVAAKEALEGHSIYEGG 305
Query: 196 FCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQYNGAQ 255
+CKLH+++SRHTDL++KVNN+R RDYT +T ++QPSILG QPV Y+GA
Sbjct: 306 YCKLHLTFSRHTDLNVKVNNERGRDYTGGNTAPTSNQPSILGPQPV---------YSGA- 355
Query: 256 FAPPPPEQPMMHQPTAAGWGAVPPASQ-SMPMMGNHPYMPPGSMPMGPGM 304
+ P++A VPP + + P +HPY +P P +
Sbjct: 356 ---------YNNAPSSATGAVVPPGTTLTPPGAPSHPYTSSEPLPQTPAV 396
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/116 (51%), Positives = 74/116 (63%), Gaps = 7/116 (6%)
Query: 123 EPESNVLLASIEN-MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 181
E NVLL S+E + AV++DVLH+VFSAFG VQKIA F+K G QALIQ+ D +TA
Sbjct: 105 EAAGNVLLVSMEGVLPDAVSIDVLHLVFSAFGFVQKIATFEKASGYQALIQFCDTETASS 164
Query: 182 AKEALEGHCIYDGGF------CKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNS 231
AK AL+G CI C L I+YS HT L++K + RSRDYT P P+ S
Sbjct: 165 AKAALDGRCIPSYLLPELDVPCTLRINYSAHTVLNVKFQSHRSRDYTNPYLPVAPS 220
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 60/90 (66%), Gaps = 6/90 (6%)
Query: 7 LLKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPE 66
++ + + +VFSAFGFV KI FEK +GFQAL+Q+ D +TA +AK AL+G SI
Sbjct: 249 VVTIDVLHEVFSAFGFVQKIAIFEKNSGFQALIQYPDIQTAVAAKEALEGHSI------Y 302
Query: 67 NMGPCTLRITYSAHTDLSVKFQSHRSRDYT 96
G C L +T+S HTDL+VK + R RDYT
Sbjct: 303 EGGYCKLHLTFSRHTDLNVKVNNERGRDYT 332
>gi|115438631|ref|NP_001043595.1| Os01g0619000 [Oryza sativa Japonica Group]
gi|54290863|dbj|BAD61524.1| polypyrimidine tract-binding protein-like [Oryza sativa Japonica
Group]
gi|113533126|dbj|BAF05509.1| Os01g0619000 [Oryza sativa Japonica Group]
gi|215697045|dbj|BAG91039.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 448
Score = 350 bits (897), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 185/290 (63%), Positives = 213/290 (73%), Gaps = 25/290 (8%)
Query: 16 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 75
VFSAFGFV KI TFEK +G+QAL+QF DTETASSAK ALDGR IP YLLPE PCTLRI
Sbjct: 25 VFSAFGFVQKIATFEKASGYQALIQFCDTETASSAKAALDGRCIPSYLLPELDVPCTLRI 84
Query: 76 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 135
YSAHT L+VKFQSHRSRDYTNPYLPVAPSAID SG DGKK E ESNVLLAS+EN
Sbjct: 85 NYSAHTVLNVKFQSHRSRDYTNPYLPVAPSAIDGSGP-----DGKKQEAESNVLLASVEN 139
Query: 136 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 195
MQY VT+DVLH VFSAFG VQKIA+F+KN G QALIQYPD+QTAV AKEALEGH IY+GG
Sbjct: 140 MQYVVTIDVLHEVFSAFGFVQKIAIFEKNSGFQALIQYPDIQTAVAAKEALEGHSIYEGG 199
Query: 196 FCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQYNGAQ 255
+CKLH+++SRHTDL++KVNN+R RDYT +T ++QPSILG QPV + YN A
Sbjct: 200 YCKLHLTFSRHTDLNVKVNNERGRDYTGGNTAPTSNQPSILGPQPV-----YSGAYNNA- 253
Query: 256 FAPPPPEQPMMHQPTAAGWGAVPPASQ-SMPMMGNHPYMPPGSMPMGPGM 304
P++A VPP + + P +HPY +P P +
Sbjct: 254 -------------PSSATGAVVPPGTTLTPPGAPSHPYTSSEPLPQTPAV 290
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 60/91 (65%), Gaps = 6/91 (6%)
Query: 7 LLKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPE 66
++ + + +VFSAFGFV KI FEK +GFQAL+Q+ D +TA +AK AL+G SI
Sbjct: 143 VVTIDVLHEVFSAFGFVQKIAIFEKNSGFQALIQYPDIQTAVAAKEALEGHSI------Y 196
Query: 67 NMGPCTLRITYSAHTDLSVKFQSHRSRDYTN 97
G C L +T+S HTDL+VK + R RDYT
Sbjct: 197 EGGYCKLHLTFSRHTDLNVKVNNERGRDYTG 227
>gi|297832822|ref|XP_002884293.1| polypyrimidine tract-binding [Arabidopsis lyrata subsp. lyrata]
gi|297330133|gb|EFH60552.1| polypyrimidine tract-binding [Arabidopsis lyrata subsp. lyrata]
Length = 398
Score = 348 bits (892), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 180/294 (61%), Positives = 213/294 (72%), Gaps = 30/294 (10%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ + I VFSAFGFVHKI TFEK AGFQALVQFSD ETAS+A+NALDGRSIPRYLLPE+
Sbjct: 124 VSIDVIHLVFSAFGFVHKIATFEKAAGFQALVQFSDVETASAARNALDGRSIPRYLLPEH 183
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN 127
+G C LR++YSAHTDL++KFQSHRSRDYTNPYLPV +A+D S Q ++G DGKK+E +SN
Sbjct: 184 VGSCNLRMSYSAHTDLNIKFQSHRSRDYTNPYLPVNHTAMDGSMQPALGADGKKVESQSN 243
Query: 128 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 187
VLL IENMQYAVT+DVLH VFSA+G VQKIA+F+KNG QALIQY D+ TA +AKEALE
Sbjct: 244 VLLGLIENMQYAVTVDVLHTVFSAYGTVQKIAIFEKNGSTQALIQYSDIPTAAIAKEALE 303
Query: 188 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGAT 247
GHCIYDGG+CKL +SYSRHTDL++K +D+SRDYTLP S+L Q+ P V A+
Sbjct: 304 GHCIYDGGYCKLRLSYSRHTDLNVKAFSDKSRDYTLPDL-------SLLAQKG-PGVSAS 355
Query: 248 ANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMPMMGNHPYMPPGSMPMG 301
APP Q Q +G+G PYM P S P G
Sbjct: 356 ---------APPTGWQNPQVQTQYSGYGG-------------SPYMYPSSDPNG 387
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/109 (50%), Positives = 73/109 (66%), Gaps = 7/109 (6%)
Query: 127 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
NVLL + E ++ + V++DV+H+VFSAFG V KIA F+K G QAL+Q+ DV+TA A+ A
Sbjct: 110 NVLLVTFEGVESHEVSIDVIHLVFSAFGFVHKIATFEKAAGFQALVQFSDVETASAARNA 169
Query: 186 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 228
L+G I G C L +SYS HTDL+IK + RSRDYT P P+
Sbjct: 170 LDGRSIPRYLLPEHVGSCNLRMSYSAHTDLNIKFQSHRSRDYTNPYLPV 218
>gi|356531748|ref|XP_003534438.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
isoform 1 [Glycine max]
Length = 496
Score = 345 bits (886), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 161/225 (71%), Positives = 193/225 (85%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ + I VFSAFGFVHKI TFEKTAGFQAL+QF+D ETASSA++ALDGRSIPRYLLP +
Sbjct: 124 VSIDVIHLVFSAFGFVHKIATFEKTAGFQALIQFTDAETASSARDALDGRSIPRYLLPAH 183
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN 127
+G C LRI+YSAH DL++KFQS+RSRDYTNP LPV +AI+ + Q +VG DGK+ EPESN
Sbjct: 184 VGSCNLRISYSAHKDLNIKFQSNRSRDYTNPMLPVNYTAIEGAVQTAVGPDGKRKEPESN 243
Query: 128 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 187
VLLASIENMQYAVT+DVLH VFSAFG VQKIA+F+KNG QALIQYPD+ TA A+EALE
Sbjct: 244 VLLASIENMQYAVTVDVLHTVFSAFGTVQKIAIFEKNGQTQALIQYPDIITASAAREALE 303
Query: 188 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQ 232
GHCIYDGG+CKLH+SYSRHTDL++K +D+SRDYT+P ++ +Q
Sbjct: 304 GHCIYDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTVPDPSLLAAQ 348
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 73/109 (66%), Gaps = 7/109 (6%)
Query: 127 NVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
NVLL +IE ++ V++DV+H+VFSAFG V KIA F+K G QALIQ+ D +TA A++A
Sbjct: 110 NVLLVTIEGVEAGDVSIDVIHLVFSAFGFVHKIATFEKTAGFQALIQFTDAETASSARDA 169
Query: 186 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 228
L+G I G C L ISYS H DL+IK ++RSRDYT P P+
Sbjct: 170 LDGRSIPRYLLPAHVGSCNLRISYSAHKDLNIKFQSNRSRDYTNPMLPV 218
>gi|356568676|ref|XP_003552536.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
isoform 1 [Glycine max]
Length = 496
Score = 345 bits (885), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 167/247 (67%), Positives = 202/247 (81%), Gaps = 3/247 (1%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ + I VFSAFGFVHKI TFEKTAGFQAL+QF+D ETASSA++ALDGRSIPRYLLP +
Sbjct: 124 VSIDVIHLVFSAFGFVHKIATFEKTAGFQALIQFTDAETASSARDALDGRSIPRYLLPAH 183
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN 127
+G C LRI+YSAH DL++KFQS+RSRDYTNP LPV +AI+ + Q +VG DGK+ EP+SN
Sbjct: 184 VGSCNLRISYSAHKDLNIKFQSNRSRDYTNPMLPVNYTAIEGAVQTAVGPDGKRKEPDSN 243
Query: 128 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 187
VLLASIENMQYAVT+DVLH VFSAFG VQKIA+F+KNG QALIQYPD+ TA A+EALE
Sbjct: 244 VLLASIENMQYAVTVDVLHTVFSAFGTVQKIAIFEKNGQTQALIQYPDIITASAAREALE 303
Query: 188 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQ-PSILGQQP--VPMV 244
GHCIYDGG+CKLH+SYSRHTDL++K +D+SRDYT+P ++ +Q P+ Q P PM
Sbjct: 304 GHCIYDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTVPDPSLLAAQGPATAWQNPQAAPMY 363
Query: 245 GATANQY 251
+A Y
Sbjct: 364 PGSAPAY 370
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 73/109 (66%), Gaps = 7/109 (6%)
Query: 127 NVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
NVLL +IE ++ V++DV+H+VFSAFG V KIA F+K G QALIQ+ D +TA A++A
Sbjct: 110 NVLLVTIEGVEAGDVSIDVIHLVFSAFGFVHKIATFEKTAGFQALIQFTDAETASSARDA 169
Query: 186 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 228
L+G I G C L ISYS H DL+IK ++RSRDYT P P+
Sbjct: 170 LDGRSIPRYLLPAHVGSCNLRISYSAHKDLNIKFQSNRSRDYTNPMLPV 218
>gi|357147881|ref|XP_003574527.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
isoform 1 [Brachypodium distachyon]
Length = 459
Score = 345 bits (884), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 186/315 (59%), Positives = 219/315 (69%), Gaps = 26/315 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ + I VFSAFGFVHKI TFEK AGFQAL+Q++D TA AKN+LDGRSIPRYLLPE+
Sbjct: 123 VSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDAPTALEAKNSLDGRSIPRYLLPEH 182
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN 127
+ C LRIT+SAH DL++KFQSHRSRDYTNPYLPV P+AI+ QL++G DGK EPESN
Sbjct: 183 VSICHLRITFSAHKDLNIKFQSHRSRDYTNPYLPVNPTAIEGIAQLTLGPDGKVKEPESN 242
Query: 128 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 187
VLLASIENMQYAV +DVLH VF++FG VQKIAMF+KNGG+QALIQYPD+ TA VAK+ALE
Sbjct: 243 VLLASIENMQYAVGVDVLHTVFNSFGTVQKIAMFEKNGGMQALIQYPDISTAAVAKQALE 302
Query: 188 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGAT 247
GHCIYDGG+CKLH+SYSRHTDL++K +++RSRDYT S P Q + GQ P
Sbjct: 303 GHCIYDGGYCKLHLSYSRHTDLNVKAHDERSRDYT-ASNPSAQVQAA--GQAPGLSTAGV 359
Query: 248 ANQYN--GAQFAPP----------PPEQPMMHQPTAAGWGAVPPASQSMP----MMGNHP 291
A Q A F P P P M Q GA AS S P M + P
Sbjct: 360 AWQNTTPAASFYPSSAGGNPVGQVPAWNPNMQQ------GAFASASTSYPTQSLMANSGP 413
Query: 292 YMPP-GSMPMGPGMM 305
+ P GS P M+
Sbjct: 414 HYPAVGSSSGAPPML 428
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/109 (49%), Positives = 70/109 (64%), Gaps = 7/109 (6%)
Query: 127 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
NVLL + E++Q V++DV+H+VFSAFG V KIA F+K G QALIQY D TA+ AK +
Sbjct: 109 NVLLVTFEDVQPNDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDAPTALEAKNS 168
Query: 186 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 228
L+G I C L I++S H DL+IK + RSRDYT P P+
Sbjct: 169 LDGRSIPRYLLPEHVSICHLRITFSAHKDLNIKFQSHRSRDYTNPYLPV 217
>gi|15232047|ref|NP_186764.1| polypyrimidine tract-binding protein 1 [Arabidopsis thaliana]
gi|75336151|sp|Q9MAC5.1|PTBP1_ARATH RecName: Full=Polypyrimidine tract-binding protein homolog 1
gi|6714473|gb|AAF26159.1|AC008261_16 putative polypyrimidine tract-binding protein [Arabidopsis
thaliana]
gi|222423255|dbj|BAH19604.1| AT3G01150 [Arabidopsis thaliana]
gi|332640095|gb|AEE73616.1| polypyrimidine tract-binding protein 1 [Arabidopsis thaliana]
Length = 399
Score = 344 bits (883), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 176/286 (61%), Positives = 207/286 (72%), Gaps = 29/286 (10%)
Query: 16 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 75
VFSAFGFVHKI TFEK AGFQALVQF+D ETAS+A++ALDGRSIPRYLL ++G C+LR+
Sbjct: 132 VFSAFGFVHKIATFEKAAGFQALVQFTDVETASAARSALDGRSIPRYLLSAHVGSCSLRM 191
Query: 76 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 135
+YSAHTDL++KFQSHRSRDYTNPYLPV +A+D S Q ++G DGKK+E +SNVLL IEN
Sbjct: 192 SYSAHTDLNIKFQSHRSRDYTNPYLPVNQTAMDGSMQPALGADGKKVESQSNVLLGLIEN 251
Query: 136 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 195
MQYAVT+DVLH VFSA+G VQKIA+F+KNG QALIQY D+ TA +AKEALEGHCIYDGG
Sbjct: 252 MQYAVTVDVLHTVFSAYGTVQKIAIFEKNGSTQALIQYSDIPTAAMAKEALEGHCIYDGG 311
Query: 196 FCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQYNGAQ 255
+CKL +SYSRHTDL++K +D+SRDYTLP S+L Q P V +A
Sbjct: 312 YCKLRLSYSRHTDLNVKAFSDKSRDYTLPDL-------SLLVAQKGPAVSGSA------- 357
Query: 256 FAPPPPEQPMMHQPTAAGWGAVPPASQSMPMMGNHPYMPPGSMPMG 301
PP AGW P A G PYM P S P G
Sbjct: 358 ----PP----------AGWQN-PQAQSQYSGYGGSPYMYPSSDPNG 388
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/109 (50%), Positives = 73/109 (66%), Gaps = 7/109 (6%)
Query: 127 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
NVLL + E ++ + V++DV+H+VFSAFG V KIA F+K G QAL+Q+ DV+TA A+ A
Sbjct: 110 NVLLVTFEGVESHEVSIDVIHLVFSAFGFVHKIATFEKAAGFQALVQFTDVETASAARSA 169
Query: 186 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 228
L+G I G C L +SYS HTDL+IK + RSRDYT P P+
Sbjct: 170 LDGRSIPRYLLSAHVGSCSLRMSYSAHTDLNIKFQSHRSRDYTNPYLPV 218
>gi|357130514|ref|XP_003566893.1| PREDICTED: polypyrimidine tract-binding protein homolog 2-like
[Brachypodium distachyon]
Length = 544
Score = 344 bits (883), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 168/239 (70%), Positives = 195/239 (81%), Gaps = 5/239 (2%)
Query: 16 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 75
VFSAFG+VHKI TFEK +G+QAL+QFSD ETASSAK ALDGR IP YLLP+ G CTLRI
Sbjct: 132 VFSAFGYVHKIATFEKASGYQALIQFSDAETASSAKAALDGRCIPSYLLPDLDGACTLRI 191
Query: 76 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 135
YSAH+ L+VKFQSHRSRDYTNPYLP+APSAID SG LDGKK E ESNVLLAS+EN
Sbjct: 192 NYSAHSVLNVKFQSHRSRDYTNPYLPLAPSAIDGSG-----LDGKKQEAESNVLLASVEN 246
Query: 136 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 195
MQY VT+D LH VFSAFG V KIA+F+KN G ALIQYPD+QTAV A+EALEGH IY+GG
Sbjct: 247 MQYIVTIDALHEVFSAFGFVHKIAIFEKNSGFHALIQYPDIQTAVKAREALEGHSIYEGG 306
Query: 196 FCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQYNGA 254
+CKLH+++SRHTDL++++NN+R RDYT S+ N +PSILG QP VGA A Y+ A
Sbjct: 307 YCKLHLTFSRHTDLNVRINNERGRDYTGGSSAPANYEPSILGPQPTLPVGAVAPPYSSA 365
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/112 (50%), Positives = 73/112 (65%), Gaps = 7/112 (6%)
Query: 127 NVLLASIEN-MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
NVLL ++E + AV++DVLH+VFSAFG V KIA F+K G QALIQ+ D +TA AK A
Sbjct: 110 NVLLVTMEGVLPDAVSIDVLHLVFSAFGYVHKIATFEKASGYQALIQFSDAETASSAKAA 169
Query: 186 LEGHCIYD------GGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNS 231
L+G CI G C L I+YS H+ L++K + RSRDYT P P+ S
Sbjct: 170 LDGRCIPSYLLPDLDGACTLRINYSAHSVLNVKFQSHRSRDYTNPYLPLAPS 221
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 59/90 (65%), Gaps = 6/90 (6%)
Query: 7 LLKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPE 66
++ + + +VFSAFGFVHKI FEK +GF AL+Q+ D +TA A+ AL+G SI
Sbjct: 250 IVTIDALHEVFSAFGFVHKIAIFEKNSGFHALIQYPDIQTAVKAREALEGHSI------Y 303
Query: 67 NMGPCTLRITYSAHTDLSVKFQSHRSRDYT 96
G C L +T+S HTDL+V+ + R RDYT
Sbjct: 304 EGGYCKLHLTFSRHTDLNVRINNERGRDYT 333
>gi|242079253|ref|XP_002444395.1| hypothetical protein SORBIDRAFT_07g021250 [Sorghum bicolor]
gi|241940745|gb|EES13890.1| hypothetical protein SORBIDRAFT_07g021250 [Sorghum bicolor]
Length = 462
Score = 343 bits (880), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 160/216 (74%), Positives = 189/216 (87%), Gaps = 2/216 (0%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
++VI + VFSAFGFVHKI TFEK AGFQAL+Q++D TA AKN+LDGRSIP+YLLPE+
Sbjct: 126 IEVIHL--VFSAFGFVHKIATFEKAAGFQALIQYTDAPTALEAKNSLDGRSIPKYLLPEH 183
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN 127
+ C +RIT+SAH DL++KFQSHRSRDYTNPYLPV +AI+ Q +VG DGK EPESN
Sbjct: 184 ISACHMRITFSAHKDLNIKFQSHRSRDYTNPYLPVNQTAIEGIVQPTVGPDGKVKEPESN 243
Query: 128 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 187
VLLASIENMQYAVT+DVLH VFSAFG VQKIAMF+KNGG+QALIQYPD+ TA VAK+ALE
Sbjct: 244 VLLASIENMQYAVTVDVLHTVFSAFGSVQKIAMFEKNGGMQALIQYPDITTAAVAKQALE 303
Query: 188 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTL 223
GHCIYDGG+CKLH+SYSRHTDL++K +++RSRDYTL
Sbjct: 304 GHCIYDGGYCKLHLSYSRHTDLNVKAHDERSRDYTL 339
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/118 (47%), Positives = 74/118 (62%), Gaps = 9/118 (7%)
Query: 127 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
NVLL + E +Q VT++V+H+VFSAFG V KIA F+K G QALIQY D TA+ AK +
Sbjct: 110 NVLLVTFEGVQPNDVTIEVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDAPTALEAKNS 169
Query: 186 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILG 237
L+G I C + I++S H DL+IK + RSRDYT P P+ +Q +I G
Sbjct: 170 LDGRSIPKYLLPEHISACHMRITFSAHKDLNIKFQSHRSRDYTNPYLPV--NQTAIEG 225
>gi|3395938|gb|AAC62015.1| polypyrimidine tract-binding protein homolog [Arabidopsis thaliana]
Length = 418
Score = 341 bits (875), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 159/227 (70%), Positives = 193/227 (85%), Gaps = 2/227 (0%)
Query: 16 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 75
VFSAFGFVHKI TFEK AGFQALVQF+D ETAS+A++ALDGRSIPRYLL ++G C+LR+
Sbjct: 132 VFSAFGFVHKIATFEKAAGFQALVQFTDVETASAARSALDGRSIPRYLLSAHVGSCSLRM 191
Query: 76 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 135
+YSAHTDL++KFQSHRSRDYTNPYLPV +A+D S Q ++G DGKK+E +SNVLL IEN
Sbjct: 192 SYSAHTDLNIKFQSHRSRDYTNPYLPVNQTAMDGSMQPALGADGKKVESQSNVLLGLIEN 251
Query: 136 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 195
MQYAVT+DVLH VFSA+G VQKIA+F+KNG QALIQY D+ TA +AKEALEGHCIYDGG
Sbjct: 252 MQYAVTVDVLHTVFSAYGTVQKIAIFEKNGSTQALIQYSDIPTAAMAKEALEGHCIYDGG 311
Query: 196 FCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQ--PSILGQQP 240
+CKL +SYSRHTDL++K +D+SRDYTLP ++ +Q P++ G P
Sbjct: 312 YCKLRLSYSRHTDLNVKAFSDKSRDYTLPDLSLLVAQKGPAVSGSAP 358
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/109 (50%), Positives = 73/109 (66%), Gaps = 7/109 (6%)
Query: 127 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
NVLL + E ++ + V++DV+H+VFSAFG V KIA F+K G QAL+Q+ DV+TA A+ A
Sbjct: 110 NVLLVTFEGVESHEVSIDVIHLVFSAFGFVHKIATFEKAAGFQALVQFTDVETASAARSA 169
Query: 186 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 228
L+G I G C L +SYS HTDL+IK + RSRDYT P P+
Sbjct: 170 LDGRSIPRYLLSAHVGSCSLRMSYSAHTDLNIKFQSHRSRDYTNPYLPV 218
>gi|388491010|gb|AFK33571.1| unknown [Lotus japonicus]
Length = 457
Score = 341 bits (874), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 185/335 (55%), Positives = 228/335 (68%), Gaps = 23/335 (6%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ + I VFSAFGFVHKI TFEKTAGFQAL+QF+D ETAS A+NALDGRSIP YLLP++
Sbjct: 124 VTIDVIHLVFSAFGFVHKIATFEKTAGFQALIQFTDAETASLARNALDGRSIPSYLLPQH 183
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN 127
+G C LRI+YSAH DL++KFQS+RSRDYTNP LPV +AID + Q VG DGK+ E ESN
Sbjct: 184 VGSCNLRISYSAHRDLNIKFQSNRSRDYTNPMLPVNQTAIDGALQPVVGPDGKRTESESN 243
Query: 128 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 187
VLLA+IENMQYAVT++VLH VFSAFG VQKIA+F+KNG QALIQYPDV TA AKEALE
Sbjct: 244 VLLATIENMQYAVTVEVLHTVFSAFGTVQKIAIFEKNGQTQALIQYPDVTTAAAAKEALE 303
Query: 188 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT----------LPSTPMVN------- 230
GHCIYDGG+CKLH++YSRHTDL++K +D+SRDYT +P+T N
Sbjct: 304 GHCIYDGGYCKLHLTYSRHTDLNVKAYSDKSRDYTVLDPSLRAAQVPATAWPNPQAAPMY 363
Query: 231 --SQPSILGQQPVPMVGAT--ANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMPM 286
S P++ GQ + + A+Q + P P P + P A + + SM +
Sbjct: 364 PGSAPALQGQVSGGQMSSWDPAHQEVSQSYIPAPGTFP-GYSPAATSSNHLVHNASSMGI 422
Query: 287 MGNHPYMPPGSMPMGPGMMQMHMPGQ-SGMQHHHG 320
N P + P GPG P +G+QH+HG
Sbjct: 423 TQNVHSQPSVASPPGPGSSPHTQPSSFAGLQHYHG 457
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/123 (50%), Positives = 81/123 (65%), Gaps = 10/123 (8%)
Query: 127 NVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
NVLL ++E ++ VT+DV+H+VFSAFG V KIA F+K G QALIQ+ D +TA +A+ A
Sbjct: 110 NVLLVTMEGVEAGDVTIDVIHLVFSAFGFVHKIATFEKTAGFQALIQFTDAETASLARNA 169
Query: 186 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ- 238
L+G I G C L ISYS H DL+IK ++RSRDYT P P+ +Q +I G
Sbjct: 170 LDGRSIPSYLLPQHVGSCNLRISYSAHRDLNIKFQSNRSRDYTNPMLPV--NQTAIDGAL 227
Query: 239 QPV 241
QPV
Sbjct: 228 QPV 230
>gi|326502954|dbj|BAJ99105.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 343
Score = 340 bits (873), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 172/283 (60%), Positives = 205/283 (72%), Gaps = 38/283 (13%)
Query: 14 LQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTL 73
QVFSAFGFVHKI TFEK AGFQAL+Q++D TAS+A+ ALDGRSIPRYLLP+++ C L
Sbjct: 7 FQVFSAFGFVHKIATFEKAAGFQALIQYTDPPTASAAREALDGRSIPRYLLPDHVVSCHL 66
Query: 74 RITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASI 133
RI++SAH DL++KFQSHRSRDYTNPYLPV SAID++ Q +VG DG+++E E NVLLASI
Sbjct: 67 RISFSAHKDLNIKFQSHRSRDYTNPYLPVNSSAIDSTLQPAVGADGRRVEAEGNVLLASI 126
Query: 134 ENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYD 193
ENMQYAV++DVLH VFSAFG VQKIA+F+KNGG QALIQYPD TA +AKEALEGHCIYD
Sbjct: 127 ENMQYAVSVDVLHTVFSAFGTVQKIAIFEKNGGTQALIQYPDASTATIAKEALEGHCIYD 186
Query: 194 GGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQYNG 253
GG+CK+H+SYSRHTDL++K ++D+S+DYT P G
Sbjct: 187 GGYCKIHLSYSRHTDLNVKAHSDKSKDYTTP---------------------------EG 219
Query: 254 AQFAPPPPEQPMMHQPTAAGWGAVPPASQSMPMMGNHPYMPPG 296
AQ A P QP PT AGW A+ PY PPG
Sbjct: 220 AQQAAP---QPAGVPPTTAGWQGNSQAAG--------PYGPPG 251
>gi|326511767|dbj|BAJ92028.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 470
Score = 340 bits (871), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 172/291 (59%), Positives = 208/291 (71%), Gaps = 38/291 (13%)
Query: 6 SLLKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLP 65
S + + I VFSAFGFVHKI TFEK AGFQAL+Q++D TAS+A+ ALDGRSIPRYLLP
Sbjct: 126 SDVTIDVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDPPTASAAREALDGRSIPRYLLP 185
Query: 66 ENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPE 125
+++ C LRI++SAH DL++KFQSHRSRDYTNPYLPV SAID++ Q +VG DG+++E E
Sbjct: 186 DHVVSCHLRISFSAHKDLNIKFQSHRSRDYTNPYLPVNSSAIDSTLQPAVGADGRRVEAE 245
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
NVLLASIENMQYAV++DVLH VFSAFG VQKIA+F+KNGG QALIQYPD TA + KEA
Sbjct: 246 GNVLLASIENMQYAVSVDVLHTVFSAFGTVQKIAIFEKNGGTQALIQYPDASTATIVKEA 305
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 245
LEGHCIYDGG+CK+H+SYSRHTDL++K ++D+S+DYT+P
Sbjct: 306 LEGHCIYDGGYCKIHLSYSRHTDLNVKAHSDKSKDYTIPE-------------------- 345
Query: 246 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMPMMGNHPYMPPG 296
GAQ A P QP PT AGW A+ PY PPG
Sbjct: 346 -------GAQQAAP---QPAGVPPTTAGWQGNSQAAG--------PYGPPG 378
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/131 (51%), Positives = 80/131 (61%), Gaps = 10/131 (7%)
Query: 123 EPESNVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 181
E NVLL +IE +Q + VT+DV+H+VFSAFG V KIA F+K G QALIQY D TA
Sbjct: 110 ETAGNVLLVTIEGVQASDVTIDVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDPPTASA 169
Query: 182 AKEALEGHCIYDGGF------CKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
A+EAL+G I C L IS+S H DL+IK + RSRDYT P P VNS S
Sbjct: 170 AREALDGRSIPRYLLPDHVVSCHLRISFSAHKDLNIKFQSHRSRDYTNPYLP-VNS--SA 226
Query: 236 LGQQPVPMVGA 246
+ P VGA
Sbjct: 227 IDSTLQPAVGA 237
>gi|413922344|gb|AFW62276.1| hypothetical protein ZEAMMB73_137441 [Zea mays]
Length = 458
Score = 338 bits (868), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 181/303 (59%), Positives = 217/303 (71%), Gaps = 29/303 (9%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
++VI + VFSAFGFVHKI TFEK AGFQ ++D TA AKN+LDGRSIP+YLLPE+
Sbjct: 126 IEVIHL--VFSAFGFVHKIATFEKAAGFQ----YTDAPTALEAKNSLDGRSIPKYLLPEH 179
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN 127
+ C +RIT+SAH DL++KFQSHRSRDYTNPYLPV +AI+ Q +VG DGK EPESN
Sbjct: 180 ISACHMRITFSAHKDLNIKFQSHRSRDYTNPYLPVNQTAIEGIVQPTVGPDGKIKEPESN 239
Query: 128 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 187
VLLASIENMQYAVT+DVLH VFSAFG VQKIAMF+KNGG+QALIQYPD+ TA VAK+ALE
Sbjct: 240 VLLASIENMQYAVTVDVLHTVFSAFGAVQKIAMFEKNGGMQALIQYPDITTAAVAKQALE 299
Query: 188 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS----------TPMVNSQPSILG 237
GHCIYDGG+CKLH+SYSRHTDL++K ++DRSRDYTL P+++S P +
Sbjct: 300 GHCIYDGGYCKLHLSYSRHTDLNVKAHDDRSRDYTLSDPNAQLQAAAQAPVISS-PGVAW 358
Query: 238 QQP-----VPMVGATANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMPMMGNH-P 291
Q P P G+TA Q PP P M P G+ + A + P+M N P
Sbjct: 359 QNPASAPAAPFYGSTAASTPVGQ---PPAWNPNMQAP---GFASASTAYPNPPLMANSTP 412
Query: 292 YMP 294
Y P
Sbjct: 413 YYP 415
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/118 (44%), Positives = 70/118 (59%), Gaps = 13/118 (11%)
Query: 127 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
NVLL + E +Q VT++V+H+VFSAFG V KIA F+K G QY D TA+ AK +
Sbjct: 110 NVLLVTFEGVQPNDVTIEVIHLVFSAFGFVHKIATFEKAAGF----QYTDAPTALEAKNS 165
Query: 186 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILG 237
L+G I C + I++S H DL+IK + RSRDYT P P+ +Q +I G
Sbjct: 166 LDGRSIPKYLLPEHISACHMRITFSAHKDLNIKFQSHRSRDYTNPYLPV--NQTAIEG 221
>gi|242058047|ref|XP_002458169.1| hypothetical protein SORBIDRAFT_03g028150 [Sorghum bicolor]
gi|241930144|gb|EES03289.1| hypothetical protein SORBIDRAFT_03g028150 [Sorghum bicolor]
Length = 553
Score = 338 bits (866), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 164/232 (70%), Positives = 193/232 (83%), Gaps = 6/232 (2%)
Query: 16 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 75
VFSAFGFVHKI TFEK +G+QAL+QFSD ETA+SAK ALDGR IP YLLPE G CTL+I
Sbjct: 132 VFSAFGFVHKIATFEKASGYQALIQFSDAETATSAKAALDGRCIPSYLLPELDGACTLKI 191
Query: 76 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 135
+YSAH+ L+VK+QSHRSRD+TNPYLP SA DAS GLDGKK E ESN+LLAS+EN
Sbjct: 192 SYSAHSVLNVKYQSHRSRDFTNPYLPFLDSAKDAS-----GLDGKKQEAESNILLASVEN 246
Query: 136 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 195
MQY VT+DVLH VFSAFG VQKIA+F+KN G QALIQYPD+QTAV AKEALEGH IY+GG
Sbjct: 247 MQYVVTIDVLHEVFSAFGFVQKIAIFEKN-GFQALIQYPDIQTAVAAKEALEGHSIYEGG 305
Query: 196 FCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGAT 247
+CKLH+++SRHT+L++KVNN+R RDYT + + +PSILG QP+P VGA
Sbjct: 306 YCKLHLTFSRHTELNVKVNNERGRDYTKGNVTPSSDRPSILGPQPIPNVGAA 357
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 9/117 (7%)
Query: 123 EPESNVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 181
E NVLL +E + +V++DVLH+VFSAFG V KIA F+K G QALIQ+ D +TA
Sbjct: 106 EGSGNVLLVGMEGVAPDSVSIDVLHVVFSAFGFVHKIATFEKASGYQALIQFSDAETATS 165
Query: 182 AKEALEGHCI-------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNS 231
AK AL+G CI DG C L ISYS H+ L++K + RSRD+T P P ++S
Sbjct: 166 AKAALDGRCIPSYLLPELDGA-CTLKISYSAHSVLNVKYQSHRSRDFTNPYLPFLDS 221
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 59/91 (64%), Gaps = 7/91 (7%)
Query: 7 LLKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPE 66
++ + + +VFSAFGFV KI FEK GFQAL+Q+ D +TA +AK AL+G SI
Sbjct: 250 VVTIDVLHEVFSAFGFVQKIAIFEKN-GFQALIQYPDIQTAVAAKEALEGHSI------Y 302
Query: 67 NMGPCTLRITYSAHTDLSVKFQSHRSRDYTN 97
G C L +T+S HT+L+VK + R RDYT
Sbjct: 303 EGGYCKLHLTFSRHTELNVKVNNERGRDYTK 333
>gi|414867006|tpg|DAA45563.1| TPA: hypothetical protein ZEAMMB73_334584 [Zea mays]
Length = 504
Score = 336 bits (862), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 153/220 (69%), Positives = 189/220 (85%)
Query: 6 SLLKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLP 65
S + + I VFSAFG+VHKI TFEK AGFQAL+Q++D +TAS+A+ ALDGRSIP YLLP
Sbjct: 124 SDVTIDVIHMVFSAFGYVHKIATFEKAAGFQALIQYTDADTASAAREALDGRSIPSYLLP 183
Query: 66 ENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPE 125
E++ C LRI++SAH DL++KFQS+RSRDY NPYLP+ SA+D + Q +VG DG+K+E +
Sbjct: 184 EHVTSCCLRISFSAHKDLNIKFQSNRSRDYNNPYLPINYSAMDGTLQPAVGSDGRKVEAQ 243
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
NVLLASIENMQYAV++DVLH VFS+FG VQKIA+F+KNGG QALIQYPDV TA VAKEA
Sbjct: 244 GNVLLASIENMQYAVSVDVLHTVFSSFGTVQKIAIFEKNGGTQALIQYPDVNTAAVAKEA 303
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 225
LEGHCIYDGG+CKLH+SYSRHTDL++K + D+SRDYT+P+
Sbjct: 304 LEGHCIYDGGYCKLHLSYSRHTDLNVKAHGDKSRDYTIPA 343
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/113 (52%), Positives = 72/113 (63%), Gaps = 7/113 (6%)
Query: 123 EPESNVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 181
E NVLL +IE +Q + VT+DV+HMVFSAFG V KIA F+K G QALIQY D TA
Sbjct: 108 ETAGNVLLVTIEGVQASDVTIDVIHMVFSAFGYVHKIATFEKAAGFQALIQYTDADTASA 167
Query: 182 AKEALEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 228
A+EAL+G I C L IS+S H DL+IK ++RSRDY P P+
Sbjct: 168 AREALDGRSIPSYLLPEHVTSCCLRISFSAHKDLNIKFQSNRSRDYNNPYLPI 220
>gi|77745463|gb|ABB02630.1| polypyrimidine tract-binding-like [Solanum tuberosum]
Length = 437
Score = 336 bits (861), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 166/264 (62%), Positives = 199/264 (75%), Gaps = 5/264 (1%)
Query: 16 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 75
VFSAFGFV KI TFEK AGFQAL+QFSD TAS+A+ ALDGRSIP+YLLPE++ C LRI
Sbjct: 132 VFSAFGFVQKIATFEKAAGFQALIQFSDVGTASAAREALDGRSIPKYLLPEHVNHCHLRI 191
Query: 76 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 135
+YSAHTDL++KFQSHRSRDYTNPYLPV P+A++ Q VG DGKK EPESNVL AS+EN
Sbjct: 192 SYSAHTDLNIKFQSHRSRDYTNPYLPVNPTAMEGVLQPVVGPDGKKKEPESNVLFASLEN 251
Query: 136 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 195
MQYAVT+DVL+ VFSAFG VQKIA+F+KNG QALIQYPDV A AK+ALEGHCIYDGG
Sbjct: 252 MQYAVTVDVLNTVFSAFGTVQKIAIFEKNGQTQALIQYPDVTIAAAAKDALEGHCIYDGG 311
Query: 196 FCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQ--PSILGQQPV---PMVGATANQ 250
+CKLH+SYSRHTDL+++ +D+SRDYT+P + ++ Q ++ PV P G +
Sbjct: 312 YCKLHLSYSRHTDLNVQAYSDKSRDYTVPESSLLAMQQASAVHATPPVWHNPQSGPVQSS 371
Query: 251 YNGAQFAPPPPEQPMMHQPTAAGW 274
A P + P P GW
Sbjct: 372 AGYATTGTVPGQAPPTWNPNLQGW 395
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 73/109 (66%), Gaps = 7/109 (6%)
Query: 127 NVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
NVLL +IE ++ V++DV+H+VFSAFG VQKIA F+K G QALIQ+ DV TA A+EA
Sbjct: 110 NVLLVTIEGVEAGDVSIDVIHLVFSAFGFVQKIATFEKAAGFQALIQFSDVGTASAAREA 169
Query: 186 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 228
L+G I C L ISYS HTDL+IK + RSRDYT P P+
Sbjct: 170 LDGRSIPKYLLPEHVNHCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPV 218
>gi|414881408|tpg|DAA58539.1| TPA: hypothetical protein ZEAMMB73_710436 [Zea mays]
Length = 560
Score = 335 bits (860), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 174/281 (61%), Positives = 202/281 (71%), Gaps = 35/281 (12%)
Query: 16 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 75
VFSAFGFVHKI TFEK +G+QAL+QFSD ETA+SAK ALDGR IP YLLPE CTLRI
Sbjct: 132 VFSAFGFVHKIATFEKASGYQALIQFSDAETATSAKAALDGRCIPSYLLPELDVACTLRI 191
Query: 76 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 135
TYSAH+ L+VK+QSHRSRD+TNPYLP SA D SG DGKK E ESN+LLASIEN
Sbjct: 192 TYSAHSVLNVKYQSHRSRDFTNPYLPFLDSAKDGSGP-----DGKKQEAESNILLASIEN 246
Query: 136 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 195
MQY VT+DVLH VFSAFG VQKIA+F+KN G QALIQYPD+QTA AKEALEGH IY+GG
Sbjct: 247 MQYVVTIDVLHEVFSAFGFVQKIAIFEKN-GFQALIQYPDIQTAYAAKEALEGHSIYEGG 305
Query: 196 FCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQYNGAQ 255
+CKLH+++SRHT+L++KVNN+R RDYT + + QPSILG QP+P VGA
Sbjct: 306 YCKLHLTFSRHTELNVKVNNERGRDYTKGNATPSSDQPSILGPQPIPSVGA--------- 356
Query: 256 FAPPPPEQPMMHQPTAAGWGAVPPASQSMPMMGNHPYMPPG 296
A+PPA S+P + MPPG
Sbjct: 357 --------------------AIPPAQGSVPSAATNSVMPPG 377
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 73/116 (62%), Gaps = 7/116 (6%)
Query: 123 EPESNVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 181
E NVLL +E + +V++DVLH+VFSAFG V KIA F+K G QALIQ+ D +TA
Sbjct: 106 EGSGNVLLVGMEGVAPDSVSIDVLHVVFSAFGFVHKIATFEKASGYQALIQFSDAETATS 165
Query: 182 AKEALEGHCIYDGGF------CKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNS 231
AK AL+G CI C L I+YS H+ L++K + RSRD+T P P ++S
Sbjct: 166 AKAALDGRCIPSYLLPELDVACTLRITYSAHSVLNVKYQSHRSRDFTNPYLPFLDS 221
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 59/91 (64%), Gaps = 7/91 (7%)
Query: 7 LLKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPE 66
++ + + +VFSAFGFV KI FEK GFQAL+Q+ D +TA +AK AL+G SI
Sbjct: 250 VVTIDVLHEVFSAFGFVQKIAIFEKN-GFQALIQYPDIQTAYAAKEALEGHSI------Y 302
Query: 67 NMGPCTLRITYSAHTDLSVKFQSHRSRDYTN 97
G C L +T+S HT+L+VK + R RDYT
Sbjct: 303 EGGYCKLHLTFSRHTELNVKVNNERGRDYTK 333
>gi|326494672|dbj|BAJ94455.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326528325|dbj|BAJ93344.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 447
Score = 335 bits (860), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 172/281 (61%), Positives = 208/281 (74%), Gaps = 12/281 (4%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ + I VFSAFGFVHKI TFEK AGFQAL+Q++D TA AKN+LDGRSIPRYLL ++
Sbjct: 123 VSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDAPTALEAKNSLDGRSIPRYLLADH 182
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN 127
+ C LRIT+SAH DL++KFQSHRSRDYTNPYLPV P+AI+ Q +G DG EPESN
Sbjct: 183 VSICHLRITFSAHKDLNIKFQSHRSRDYTNPYLPVNPTAIEGITQPILGSDGMIKEPESN 242
Query: 128 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 187
VLLASIENMQYAV +DVLH VFS+FG VQKIAMF+KNGG+QALIQYPD+ TA VAK+ALE
Sbjct: 243 VLLASIENMQYAVGVDVLHTVFSSFGAVQKIAMFEKNGGMQALIQYPDITTAGVAKQALE 302
Query: 188 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT-LPSTPMVNSQPSILGQQPVP--MV 244
GHCIYDGG+CKLH+SYSRHTDL++K +++RSRDYT L + V + P ++ Q P
Sbjct: 303 GHCIYDGGYCKLHLSYSRHTDLNVKAHDERSRDYTVLDPSARVQAPPGVVWQSTTPAGFY 362
Query: 245 GATANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMP 285
G++A + Q P P M + GA AS S P
Sbjct: 363 GSSAGATSVGQV---PTWNPNMQR------GAFASASTSYP 394
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/109 (49%), Positives = 69/109 (63%), Gaps = 7/109 (6%)
Query: 127 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
NVLL + E +Q V++DV+H+VFSAFG V KIA F+K G QALIQY D TA+ AK +
Sbjct: 109 NVLLVTFEGVQPNDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDAPTALEAKNS 168
Query: 186 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 228
L+G I C L I++S H DL+IK + RSRDYT P P+
Sbjct: 169 LDGRSIPRYLLADHVSICHLRITFSAHKDLNIKFQSHRSRDYTNPYLPV 217
>gi|81076794|gb|ABB55397.1| polypyrimidine tract-binding protein-like [Solanum tuberosum]
Length = 442
Score = 334 bits (856), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 157/225 (69%), Positives = 188/225 (83%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ + I VFSAFGFV KI TFEK AGFQAL+QFSD TAS+A+ ALDGRSIP+YLLPE+
Sbjct: 124 VSIDVIHLVFSAFGFVQKIATFEKAAGFQALIQFSDVGTASAAREALDGRSIPKYLLPEH 183
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN 127
+ C LRI+YSAHTDL++KFQSHRSRDYTNPYLPV P+A++ Q VG DGKK EPESN
Sbjct: 184 VNHCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPTAMEGVLQPVVGPDGKKKEPESN 243
Query: 128 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 187
VL AS+ENMQYAVT+DVL+ VFSAFG VQKIA+F+KNG QALIQYPDV A AK+ALE
Sbjct: 244 VLFASLENMQYAVTVDVLNTVFSAFGTVQKIAIFEKNGQTQALIQYPDVTIAAAAKDALE 303
Query: 188 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQ 232
GHCIYDGG+CKLH+SYSRHTDL+++ +D+SRDYT+P + ++ Q
Sbjct: 304 GHCIYDGGYCKLHLSYSRHTDLNVQAYSDKSRDYTVPESSLLAMQ 348
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 73/109 (66%), Gaps = 7/109 (6%)
Query: 127 NVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
NVLL +IE ++ V++DV+H+VFSAFG VQKIA F+K G QALIQ+ DV TA A+EA
Sbjct: 110 NVLLVTIEGVEAGDVSIDVIHLVFSAFGFVQKIATFEKAAGFQALIQFSDVGTASAAREA 169
Query: 186 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 228
L+G I C L ISYS HTDL+IK + RSRDYT P P+
Sbjct: 170 LDGRSIPKYLLPEHVNHCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPV 218
>gi|334702291|gb|AEG89705.1| polypyrimidine tract-binding protein 7 [Solanum tuberosum]
Length = 467
Score = 334 bits (856), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 164/251 (65%), Positives = 196/251 (78%), Gaps = 7/251 (2%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ + I VFSAFGFV KI TFEK AGFQAL+QFSD TAS+A+ ALDGRSIP+YLLPE+
Sbjct: 124 VSIDVIHLVFSAFGFVQKIATFEKAAGFQALIQFSDVGTASAAREALDGRSIPKYLLPEH 183
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN 127
+ C LRI+YSAHTDL++KFQSHRSRDYTNPYLPV P+A++ Q VG DGKK EPESN
Sbjct: 184 VNHCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPTAMEGVLQPVVGPDGKKKEPESN 243
Query: 128 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 187
VL AS+ENMQYAVT+DVL+ VFSAFG VQKIA+F+KNG QALIQYPDV A AK+ALE
Sbjct: 244 VLFASLENMQYAVTVDVLNTVFSAFGTVQKIAIFEKNGQTQALIQYPDVTIAAAAKDALE 303
Query: 188 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGAT 247
GHCIYDGG+CKLH+SYSRHTDL+++ +D+SRDYT+P + S+L Q V AT
Sbjct: 304 GHCIYDGGYCKLHLSYSRHTDLNVQAYSDKSRDYTVPES-------SLLAMQQASAVHAT 356
Query: 248 ANQYNGAQFAP 258
++ Q P
Sbjct: 357 PPVWHNPQSGP 367
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 73/109 (66%), Gaps = 7/109 (6%)
Query: 127 NVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
NVLL +IE ++ V++DV+H+VFSAFG VQKIA F+K G QALIQ+ DV TA A+EA
Sbjct: 110 NVLLVTIEGVEAGDVSIDVIHLVFSAFGFVQKIATFEKAAGFQALIQFSDVGTASAAREA 169
Query: 186 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 228
L+G I C L ISYS HTDL+IK + RSRDYT P P+
Sbjct: 170 LDGRSIPKYLLPEHVNHCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPV 218
>gi|223972751|gb|ACN30563.1| unknown [Zea mays]
gi|223973771|gb|ACN31073.1| unknown [Zea mays]
Length = 487
Score = 334 bits (856), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 152/220 (69%), Positives = 188/220 (85%)
Query: 6 SLLKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLP 65
S + + I VFSAFG+VHKI TFEK AGFQAL+Q++D TAS+AK +LDGRSIP YLLP
Sbjct: 124 SDVTIDVIHMVFSAFGYVHKIATFEKAAGFQALIQYTDAATASAAKESLDGRSIPSYLLP 183
Query: 66 ENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPE 125
E++ C LRI++SAH DL++KFQS+RSRDY NPYLP+ SA+D + Q +VG DG+++E +
Sbjct: 184 EHVTSCCLRISFSAHKDLNIKFQSNRSRDYNNPYLPINYSAMDGTLQPAVGADGRQVEAQ 243
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
NVLLASIENMQYAVT+DVLH VFS+FG VQKIA+F+KNGG QALIQYPDV TA VAKE+
Sbjct: 244 GNVLLASIENMQYAVTVDVLHTVFSSFGSVQKIAIFEKNGGTQALIQYPDVSTAAVAKES 303
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 225
LEGHCIYDGG+CKLH+SYSRHTDL++K + D+SRDYT+P+
Sbjct: 304 LEGHCIYDGGYCKLHLSYSRHTDLNVKAHGDKSRDYTIPA 343
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/135 (48%), Positives = 79/135 (58%), Gaps = 10/135 (7%)
Query: 123 EPESNVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 181
E NVLL +IE +Q + VT+DV+HMVFSAFG V KIA F+K G QALIQY D TA
Sbjct: 108 ETAGNVLLVTIEGVQSSDVTIDVIHMVFSAFGYVHKIATFEKAAGFQALIQYTDAATASA 167
Query: 182 AKEALEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
AKE+L+G I C L IS+S H DL+IK ++RSRDY P P+ S
Sbjct: 168 AKESLDGRSIPSYLLPEHVTSCCLRISFSAHKDLNIKFQSNRSRDYNNPYLPI---NYSA 224
Query: 236 LGQQPVPMVGATANQ 250
+ P VGA Q
Sbjct: 225 MDGTLQPAVGADGRQ 239
>gi|226495275|ref|NP_001151769.1| polypyrimidine tract-binding protein [Zea mays]
gi|195649587|gb|ACG44261.1| polypyrimidine tract-binding protein [Zea mays]
Length = 487
Score = 334 bits (856), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 152/220 (69%), Positives = 188/220 (85%)
Query: 6 SLLKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLP 65
S + + I VFSAFG+VHKI TFEK AGFQAL+Q++D TAS+AK +LDGRSIP YLLP
Sbjct: 124 SDVTIDVIHMVFSAFGYVHKIATFEKAAGFQALIQYTDAATASAAKESLDGRSIPSYLLP 183
Query: 66 ENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPE 125
E++ C LRI++SAH DL++KFQS+RSRDY NPYLP+ SA+D + Q +VG DG+++E +
Sbjct: 184 EHVTSCCLRISFSAHKDLNIKFQSNRSRDYNNPYLPINYSAMDGTLQPAVGADGRQVEAQ 243
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
NVLLASIENMQYAVT+DVLH VFS+FG VQKIA+F+KNGG QALIQYPDV TA VAKE+
Sbjct: 244 GNVLLASIENMQYAVTVDVLHTVFSSFGSVQKIAIFEKNGGTQALIQYPDVSTAAVAKES 303
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 225
LEGHCIYDGG+CKLH+SYSRHTDL++K + D+SRDYT+P+
Sbjct: 304 LEGHCIYDGGYCKLHLSYSRHTDLNVKAHGDKSRDYTIPA 343
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/135 (48%), Positives = 79/135 (58%), Gaps = 10/135 (7%)
Query: 123 EPESNVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 181
E NVLL +IE +Q + VT+DV+HMVFSAFG V KIA F+K G QALIQY D TA
Sbjct: 108 ETAGNVLLVTIEGVQSSDVTIDVIHMVFSAFGYVHKIATFEKAAGFQALIQYTDAATASA 167
Query: 182 AKEALEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
AKE+L+G I C L IS+S H DL+IK ++RSRDY P P+ S
Sbjct: 168 AKESLDGRSIPSYLLPEHVTSCCLRISFSAHKDLNIKFQSNRSRDYNNPYLPI---NYSA 224
Query: 236 LGQQPVPMVGATANQ 250
+ P VGA Q
Sbjct: 225 MDGTLQPAVGADGRQ 239
>gi|115453245|ref|NP_001050223.1| Os03g0376900 [Oryza sativa Japonica Group]
gi|18921326|gb|AAL82531.1|AC084766_17 putative polypyrimidine tract-binding protein [Oryza sativa
Japonica Group]
gi|108708433|gb|ABF96228.1| Polypyrimidine tract-binding protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113548694|dbj|BAF12137.1| Os03g0376900 [Oryza sativa Japonica Group]
gi|215692946|dbj|BAG88366.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218192927|gb|EEC75354.1| hypothetical protein OsI_11790 [Oryza sativa Indica Group]
gi|222625006|gb|EEE59138.1| hypothetical protein OsJ_11035 [Oryza sativa Japonica Group]
Length = 464
Score = 332 bits (851), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 162/221 (73%), Positives = 190/221 (85%), Gaps = 1/221 (0%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ + I VFSAFGFVHKI TFEK AGFQAL+Q++D TAS+A+ ALDGRSIPRYLLPE+
Sbjct: 128 VTIDVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDAATASAAREALDGRSIPRYLLPEH 187
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN 127
+ C LRI++SAH DL++KFQSHRSRDYTNPYLPV SAID + Q +VG DG+K+E E N
Sbjct: 188 VTSCCLRISFSAHKDLNIKFQSHRSRDYTNPYLPVNSSAID-TLQPAVGADGRKVEAEGN 246
Query: 128 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 187
VLLASIENMQYAVT+DVLH VFSAFG VQKIA+F+KNGG QALIQYPDV TA VAKEALE
Sbjct: 247 VLLASIENMQYAVTVDVLHTVFSAFGTVQKIAIFEKNGGTQALIQYPDVTTASVAKEALE 306
Query: 188 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 228
GHCIYDGG+CKLH+SYSRHTDL++K ++D+SRDYT+P M
Sbjct: 307 GHCIYDGGYCKLHLSYSRHTDLNVKAHSDKSRDYTIPQGAM 347
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/135 (48%), Positives = 79/135 (58%), Gaps = 11/135 (8%)
Query: 123 EPESNVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 181
E NVLL +IE +Q VT+DV+H+VFSAFG V KIA F+K G QALIQY D TA
Sbjct: 110 ETAGNVLLVTIEGVQANDVTIDVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDAATASA 169
Query: 182 AKEALEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
A+EAL+G I C L IS+S H DL+IK + RSRDYT P P+ +S
Sbjct: 170 AREALDGRSIPRYLLPEHVTSCCLRISFSAHKDLNIKFQSHRSRDYTNPYLPVNSSAIDT 229
Query: 236 LGQQPVPMVGATANQ 250
L P VGA +
Sbjct: 230 L----QPAVGADGRK 240
>gi|225452861|ref|XP_002283752.1| PREDICTED: polypyrimidine tract-binding protein homolog 1 isoform 2
[Vitis vinifera]
Length = 420
Score = 331 bits (849), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 178/312 (57%), Positives = 214/312 (68%), Gaps = 19/312 (6%)
Query: 26 ITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAHTDLSV 85
+ T E AL+QF+D ETASSA+NALDGRSIPRYLLPE++G C LRI+YSAHTDL++
Sbjct: 113 LVTIEGVEAGDALIQFTDAETASSARNALDGRSIPRYLLPEHVGSCHLRISYSAHTDLNI 172
Query: 86 KFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVL 145
KFQSHRSRDYTNPYLPV P+AI+ Q ++G DGKK EPESNVLLASIENMQYAVT+DVL
Sbjct: 173 KFQSHRSRDYTNPYLPVNPTAIEGIAQPALGPDGKKKEPESNVLLASIENMQYAVTVDVL 232
Query: 146 HMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSR 205
H VFSAFG VQKIA+F+KNGG+QALIQYPDV TA VAKEALEGHCIYDGG+CKLH+SYSR
Sbjct: 233 HTVFSAFGTVQKIAIFEKNGGMQALIQYPDVTTAAVAKEALEGHCIYDGGYCKLHLSYSR 292
Query: 206 HTDLSIKVNNDRSRDYTLPSTPMVNSQ-------PSILGQQPVPMVGATANQYNGAQFAP 258
HTDL++K ++DRSRDYT+P + ++ Q + + Q P T + A
Sbjct: 293 HTDLNVKAHSDRSRDYTIPDSGLLAVQQAPGHPGATTVWQNPQAAPLYTGHDAAAAAAVQ 352
Query: 259 PPPEQPMM---HQPTAAGWGAVPPASQSMPMMGNHPYMPPGSMPMGPGMMQMHMPGQSGM 315
P P M A+ A P + + +P PPGS P+ P + PG
Sbjct: 353 VPSWDPNMQAGRSTFASAASAFPSQPFASSSISAYP-APPGSSPLTPAVPPNVRPG---- 407
Query: 316 QHHHGAMPPPRP 327
GA PP RP
Sbjct: 408 ----GASPPGRP 415
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 56/91 (61%), Gaps = 6/91 (6%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + VFSAFG V KI FEK G QAL+Q+ D TA+ AK AL+G I +
Sbjct: 227 VTVDVLHTVFSAFGTVQKIAIFEKNGGMQALIQYPDVTTAAVAKEALEGHCI------YD 280
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNP 98
G C L ++YS HTDL+VK S RSRDYT P
Sbjct: 281 GGYCKLHLSYSRHTDLNVKAHSDRSRDYTIP 311
>gi|164519910|gb|ABY59992.1| polypyrimidine tract-binding protein-like protein [Robinia
pseudoacacia]
Length = 240
Score = 329 bits (844), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 173/237 (72%), Positives = 192/237 (81%), Gaps = 9/237 (3%)
Query: 92 SRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSA 151
SRDYTNPYLPVA SA++ SGQ+ VGLDGK+LE ESNVLLASIENMQYAVTLDVLHMVFSA
Sbjct: 2 SRDYTNPYLPVAQSAVEGSGQVMVGLDGKRLETESNVLLASIENMQYAVTLDVLHMVFSA 61
Query: 152 FGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 211
FGPVQKIAMFDKNGGLQALIQYPD+QTAVVAKEALEGHCIYDGGFCK HISYSRHTDLSI
Sbjct: 62 FGPVQKIAMFDKNGGLQALIQYPDIQTAVVAKEALEGHCIYDGGFCKPHISYSRHTDLSI 121
Query: 212 KVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQYNGAQFAPPPPEQPMMHQPTA 271
KVNNDRSRDYT+P+TP+VN+QPSI GQ VPM+G A QYNG+Q+ P E +M Q A
Sbjct: 122 KVNNDRSRDYTIPNTPVVNAQPSISGQHAVPMMGPPAQQYNGSQYT-PISEAALMPQSQA 180
Query: 272 AGWGA-VPPASQSM-PMMGNHPYMPPGSMP--MGPGMMQMHMPGQSGMQHHHGAMPP 324
GWG +P +QSM P M N+ YMPPG++P M PG M P S M H +PP
Sbjct: 181 GGWGTPLPAVAQSMPPQMHNNMYMPPGTLPQQMAPG---MQFPSHS-MPQHASTLPP 233
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/118 (44%), Positives = 68/118 (57%), Gaps = 11/118 (9%)
Query: 2 CLTLSLLKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPR 61
+TL +L + VFSAFG V KI F+K G QAL+Q+ D +TA AK AL+G I
Sbjct: 49 AVTLDVLHM-----VFSAFGPVQKIAMFDKNGGLQALIQYPDIQTAVVAKEALEGHCI-- 101
Query: 62 YLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDG 119
+ G C I+YS HTDLS+K + RSRDYT P PV + SGQ +V + G
Sbjct: 102 ----YDGGFCKPHISYSRHTDLSIKVNNDRSRDYTIPNTPVVNAQPSISGQHAVPMMG 155
>gi|357501941|ref|XP_003621259.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
gi|355496274|gb|AES77477.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
Length = 780
Score = 328 bits (840), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 158/234 (67%), Positives = 187/234 (79%), Gaps = 22/234 (9%)
Query: 16 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 75
VFSAFGFVHKI TFEKTAGFQAL+QF+D ETA+SA++ALDGRSIPRYLLPE++G C LRI
Sbjct: 399 VFSAFGFVHKIATFEKTAGFQALIQFTDAETAASARDALDGRSIPRYLLPEHVGSCNLRI 458
Query: 76 TYSAHTDLSVKFQSHRSR----------------------DYTNPYLPVAPSAIDASGQL 113
+YSAH DL++KFQS+RS DYTNP LPV SAI+ + Q
Sbjct: 459 SYSAHRDLNIKFQSNRSSLSICPGDDQVLLFYRLGVTEAWDYTNPMLPVNHSAIEGAAQP 518
Query: 114 SVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQY 173
++G DGK++E ESNVLLASIENMQYAVT+DV++ VFSAFG VQKIAMF+KNG QALIQY
Sbjct: 519 AIGPDGKRIETESNVLLASIENMQYAVTVDVINTVFSAFGTVQKIAMFEKNGQTQALIQY 578
Query: 174 PDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
PDV TA A+EALEGHCIYDGG+CKLH+SYSRHTDL++K +D+SRDYT+P P
Sbjct: 579 PDVTTAAAAREALEGHCIYDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTVPLVP 632
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 50/78 (64%), Gaps = 6/78 (7%)
Query: 147 MVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCI------YDGGFCKLH 200
+VFSAFG V KIA F+K G QALIQ+ D +TA A++AL+G I G C L
Sbjct: 398 VVFSAFGFVHKIATFEKTAGFQALIQFTDAETAASARDALDGRSIPRYLLPEHVGSCNLR 457
Query: 201 ISYSRHTDLSIKVNNDRS 218
ISYS H DL+IK ++RS
Sbjct: 458 ISYSAHRDLNIKFQSNRS 475
>gi|125526877|gb|EAY74991.1| hypothetical protein OsI_02889 [Oryza sativa Indica Group]
Length = 583
Score = 326 bits (836), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 175/293 (59%), Positives = 208/293 (70%), Gaps = 30/293 (10%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCT 72
+ VFSAFGFV KI TFEK +G+QAL+QF DTETASSAK ALD ++ +P C
Sbjct: 162 VAWVFSAFGFVQKIATFEKASGYQALIQFCDTETASSAKAALDVIGFQKFDVP-----CL 216
Query: 73 LRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLAS 132
LRI YSAHT L+VKFQSHRSRDYTNPYLPVAPSAID SG DGKK E ESNVLLAS
Sbjct: 217 LRINYSAHTVLNVKFQSHRSRDYTNPYLPVAPSAIDGSGP-----DGKKQEAESNVLLAS 271
Query: 133 IENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 192
+ENMQY VT+DVLH VFSAFG VQKIA+F+KN G QALIQYPD+QTAV AKEALEGH IY
Sbjct: 272 VENMQYVVTIDVLHEVFSAFGFVQKIAIFEKNSGFQALIQYPDIQTAVAAKEALEGHSIY 331
Query: 193 DGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQYN 252
+GG+CKLH+++SRHTDL++KVNN+R RDYT +T ++QPSILG QPV Y+
Sbjct: 332 EGGYCKLHLTFSRHTDLNVKVNNERGRDYTGGNTAPTSNQPSILGPQPV---------YS 382
Query: 253 GAQFAPPPPEQPMMHQPTAAGWGAVPPASQ-SMPMMGNHPYMPPGSMPMGPGM 304
GA + P++A VPP + + P +HPY +P P +
Sbjct: 383 GA----------YNNAPSSATGAVVPPGTTLTPPGAPSHPYTSSEPLPQTPAV 425
>gi|242040789|ref|XP_002467789.1| hypothetical protein SORBIDRAFT_01g034060 [Sorghum bicolor]
gi|241921643|gb|EER94787.1| hypothetical protein SORBIDRAFT_01g034060 [Sorghum bicolor]
Length = 486
Score = 319 bits (818), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 154/220 (70%), Positives = 188/220 (85%)
Query: 6 SLLKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLP 65
S + + I VFSAFG+VHKI TFEK AGFQAL+Q++D TAS+A++ALDGRSIP YLLP
Sbjct: 124 SDVTIDVIHMVFSAFGYVHKIATFEKAAGFQALIQYTDAATASAARDALDGRSIPSYLLP 183
Query: 66 ENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPE 125
E++ C LRI++SAH DL++KFQS+RSRDY NPYLP+ SA+D + Q VG DG+K+E +
Sbjct: 184 EHVTSCCLRISFSAHQDLNIKFQSNRSRDYNNPYLPINYSAMDGTLQPVVGADGRKVEAQ 243
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
NVLLASIENMQYAVT+DVLH VFS+FG VQKIA+F+KNGG QALIQYPDV TA VAKEA
Sbjct: 244 GNVLLASIENMQYAVTVDVLHTVFSSFGTVQKIAIFEKNGGTQALIQYPDVNTAAVAKEA 303
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 225
LEGHCIYDGG+CKLH+SYSRHTDL++K + D+SRDYT+P+
Sbjct: 304 LEGHCIYDGGYCKLHLSYSRHTDLNVKAHGDKSRDYTIPA 343
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/113 (50%), Positives = 72/113 (63%), Gaps = 7/113 (6%)
Query: 123 EPESNVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 181
E NVLL ++E +Q + VT+DV+HMVFSAFG V KIA F+K G QALIQY D TA
Sbjct: 108 ETAGNVLLVTMEGVQASDVTIDVIHMVFSAFGYVHKIATFEKAAGFQALIQYTDAATASA 167
Query: 182 AKEALEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 228
A++AL+G I C L IS+S H DL+IK ++RSRDY P P+
Sbjct: 168 ARDALDGRSIPSYLLPEHVTSCCLRISFSAHQDLNIKFQSNRSRDYNNPYLPI 220
>gi|357501943|ref|XP_003621260.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
gi|355496275|gb|AES77478.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
Length = 618
Score = 314 bits (805), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 151/220 (68%), Positives = 177/220 (80%), Gaps = 22/220 (10%)
Query: 16 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 75
VFSAFGFVHKI TFEKTAGFQAL+QF+D ETA+SA++ALDGRSIPRYLLPE++G C LRI
Sbjct: 399 VFSAFGFVHKIATFEKTAGFQALIQFTDAETAASARDALDGRSIPRYLLPEHVGSCNLRI 458
Query: 76 TYSAHTDLSVKFQSHRSR----------------------DYTNPYLPVAPSAIDASGQL 113
+YSAH DL++KFQS+RS DYTNP LPV SAI+ + Q
Sbjct: 459 SYSAHRDLNIKFQSNRSSLSICPGDDQVLLFYRLGVTEAWDYTNPMLPVNHSAIEGAAQP 518
Query: 114 SVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQY 173
++G DGK++E ESNVLLASIENMQYAVT+DV++ VFSAFG VQKIAMF+KNG QALIQY
Sbjct: 519 AIGPDGKRIETESNVLLASIENMQYAVTVDVINTVFSAFGTVQKIAMFEKNGQTQALIQY 578
Query: 174 PDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKV 213
PDV TA A+EALEGHCIYDGG+CKLH+SYSRHTDL++KV
Sbjct: 579 PDVTTAAAAREALEGHCIYDGGYCKLHLSYSRHTDLNVKV 618
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 50/78 (64%), Gaps = 6/78 (7%)
Query: 147 MVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCI------YDGGFCKLH 200
+VFSAFG V KIA F+K G QALIQ+ D +TA A++AL+G I G C L
Sbjct: 398 VVFSAFGFVHKIATFEKTAGFQALIQFTDAETAASARDALDGRSIPRYLLPEHVGSCNLR 457
Query: 201 ISYSRHTDLSIKVNNDRS 218
ISYS H DL+IK ++RS
Sbjct: 458 ISYSAHRDLNIKFQSNRS 475
>gi|357496461|ref|XP_003618519.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
gi|355493534|gb|AES74737.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
Length = 483
Score = 311 bits (797), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 176/348 (50%), Positives = 217/348 (62%), Gaps = 54/348 (15%)
Query: 16 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 75
VFSAFGFVHK+ TFEKTAGFQAL+Q++D ETA+SAK++LDGRSIPRYLLPE++G C LRI
Sbjct: 133 VFSAFGFVHKLATFEKTAGFQALIQYTDAETAASAKDSLDGRSIPRYLLPEHVGACNLRI 192
Query: 76 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQL---------------------- 113
+YSAH DL++KFQS+RSRDYTNP LPV +AID++ Q+
Sbjct: 193 SYSAHRDLNIKFQSNRSRDYTNPMLPVNQAAIDSALQVYCSYFLPLYMFCIFLNVLTTLD 252
Query: 114 ---SVGLDGKKLEPESNVLLASIENMQYAVTLDVLH---------MVFSAFGPVQKIAMF 161
++G DGK+ E +SNVLLA+IENMQYAV LDVLH VFSAFG VQK+AMF
Sbjct: 253 VQPAIGPDGKRKEHKSNVLLATIENMQYAVPLDVLHSVRILFLIKRVFSAFGFVQKVAMF 312
Query: 162 DKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDY 221
DKNG ALIQYPD+ A AKE LEGHCIYDGG+CKLH++YSRHTDL++K +D+SRDY
Sbjct: 313 DKNGHTHALIQYPDLTIAAAAKETLEGHCIYDGGYCKLHLTYSRHTDLNVKAFSDKSRDY 372
Query: 222 TLPSTPMVNSQPSI-LGQQPVPMVGATANQYNGA--QFAPPPPEQPMMHQPTAAGWGAVP 278
T+ PS+ Q P A Y+G+ Q P Q + Q + G P
Sbjct: 373 TV-------LDPSLHAAQAPAWQTTQAATMYSGSMGQMPSWDPNQQEVTQSYLSAPGTFP 425
Query: 279 PASQSMPMMGNHPYMPPGSMPMGPGMMQMHMPGQS------GMQHHHG 320
+ P P P ++P HMP S G Q H+G
Sbjct: 426 SGQAAPPF----PGYSPAAVPPAGASPHSHMPPSSFAGAFPGSQPHYG 469
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 73/109 (66%), Gaps = 7/109 (6%)
Query: 127 NVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
NVLL +IE ++ V++DV+H+VFSAFG V K+A F+K G QALIQY D +TA AK++
Sbjct: 111 NVLLVTIEGVEAGDVSIDVIHLVFSAFGFVHKLATFEKTAGFQALIQYTDAETAASAKDS 170
Query: 186 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 228
L+G I G C L ISYS H DL+IK ++RSRDYT P P+
Sbjct: 171 LDGRSIPRYLLPEHVGACNLRISYSAHRDLNIKFQSNRSRDYTNPMLPV 219
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 59/94 (62%), Gaps = 7/94 (7%)
Query: 4 TLSLLKVIFILQ-VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRY 62
L ++++F+++ VFSAFGFV K+ F+K AL+Q+ D A++AK L+G I
Sbjct: 286 VLHSVRILFLIKRVFSAFGFVQKVAMFDKNGHTHALIQYPDLTIAAAAKETLEGHCI--- 342
Query: 63 LLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYT 96
+ G C L +TYS HTDL+VK S +SRDYT
Sbjct: 343 ---YDGGYCKLHLTYSRHTDLNVKAFSDKSRDYT 373
>gi|186509647|ref|NP_001118547.1| polypyrimidine tract-binding protein 1 [Arabidopsis thaliana]
gi|332640096|gb|AEE73617.1| polypyrimidine tract-binding protein 1 [Arabidopsis thaliana]
Length = 370
Score = 310 bits (793), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 160/276 (57%), Positives = 193/276 (69%), Gaps = 29/276 (10%)
Query: 26 ITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAHTDLSV 85
+ TFE +ALVQF+D ETAS+A++ALDGRSIPRYLL ++G C+LR++YSAHTDL++
Sbjct: 113 LVTFEGVESHEALVQFTDVETASAARSALDGRSIPRYLLSAHVGSCSLRMSYSAHTDLNI 172
Query: 86 KFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVL 145
KFQSHRSRDYTNPYLPV +A+D S Q ++G DGKK+E +SNVLL IENMQYAVT+DVL
Sbjct: 173 KFQSHRSRDYTNPYLPVNQTAMDGSMQPALGADGKKVESQSNVLLGLIENMQYAVTVDVL 232
Query: 146 HMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSR 205
H VFSA+G VQKIA+F+KNG QALIQY D+ TA +AKEALEGHCIYDGG+CKL +SYSR
Sbjct: 233 HTVFSAYGTVQKIAIFEKNGSTQALIQYSDIPTAAMAKEALEGHCIYDGGYCKLRLSYSR 292
Query: 206 HTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQYNGAQFAPPPPEQPM 265
HTDL++K +D+SRDYTLP S+L Q P V +A PP
Sbjct: 293 HTDLNVKAFSDKSRDYTLPDL-------SLLVAQKGPAVSGSA-----------PP---- 330
Query: 266 MHQPTAAGWGAVPPASQSMPMMGNHPYMPPGSMPMG 301
AGW P A G PYM P S P G
Sbjct: 331 ------AGWQN-PQAQSQYSGYGGSPYMYPSSDPNG 359
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/87 (51%), Positives = 56/87 (64%), Gaps = 6/87 (6%)
Query: 16 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 75
VFSA+G V KI FEK QAL+Q+SD TA+ AK AL+G I + G C LR+
Sbjct: 235 VFSAYGTVQKIAIFEKNGSTQALIQYSDIPTAAMAKEALEGHCI------YDGGYCKLRL 288
Query: 76 TYSAHTDLSVKFQSHRSRDYTNPYLPV 102
+YS HTDL+VK S +SRDYT P L +
Sbjct: 289 SYSRHTDLNVKAFSDKSRDYTLPDLSL 315
>gi|356531752|ref|XP_003534440.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
isoform 3 [Glycine max]
Length = 467
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 142/207 (68%), Positives = 173/207 (83%)
Query: 26 ITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAHTDLSV 85
+ T E AL+QF+D ETASSA++ALDGRSIPRYLLP ++G C LRI+YSAH DL++
Sbjct: 113 LVTIEGVEAGDALIQFTDAETASSARDALDGRSIPRYLLPAHVGSCNLRISYSAHKDLNI 172
Query: 86 KFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVL 145
KFQS+RSRDYTNP LPV +AI+ + Q +VG DGK+ EPESNVLLASIENMQYAVT+DVL
Sbjct: 173 KFQSNRSRDYTNPMLPVNYTAIEGAVQTAVGPDGKRKEPESNVLLASIENMQYAVTVDVL 232
Query: 146 HMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSR 205
H VFSAFG VQKIA+F+KNG QALIQYPD+ TA A+EALEGHCIYDGG+CKLH+SYSR
Sbjct: 233 HTVFSAFGTVQKIAIFEKNGQTQALIQYPDIITASAAREALEGHCIYDGGYCKLHLSYSR 292
Query: 206 HTDLSIKVNNDRSRDYTLPSTPMVNSQ 232
HTDL++K +D+SRDYT+P ++ +Q
Sbjct: 293 HTDLNVKAFSDKSRDYTVPDPSLLAAQ 319
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 56/91 (61%), Gaps = 6/91 (6%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + VFSAFG V KI FEK QAL+Q+ D TAS+A+ AL+G I +
Sbjct: 227 VTVDVLHTVFSAFGTVQKIAIFEKNGQTQALIQYPDIITASAAREALEGHCI------YD 280
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNP 98
G C L ++YS HTDL+VK S +SRDYT P
Sbjct: 281 GGYCKLHLSYSRHTDLNVKAFSDKSRDYTVP 311
>gi|356568678|ref|XP_003552537.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
isoform 2 [Glycine max]
Length = 467
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 148/229 (64%), Positives = 182/229 (79%), Gaps = 3/229 (1%)
Query: 26 ITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAHTDLSV 85
+ T E AL+QF+D ETASSA++ALDGRSIPRYLLP ++G C LRI+YSAH DL++
Sbjct: 113 LVTIEGVEAGDALIQFTDAETASSARDALDGRSIPRYLLPAHVGSCNLRISYSAHKDLNI 172
Query: 86 KFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVL 145
KFQS+RSRDYTNP LPV +AI+ + Q +VG DGK+ EP+SNVLLASIENMQYAVT+DVL
Sbjct: 173 KFQSNRSRDYTNPMLPVNYTAIEGAVQTAVGPDGKRKEPDSNVLLASIENMQYAVTVDVL 232
Query: 146 HMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSR 205
H VFSAFG VQKIA+F+KNG QALIQYPD+ TA A+EALEGHCIYDGG+CKLH+SYSR
Sbjct: 233 HTVFSAFGTVQKIAIFEKNGQTQALIQYPDIITASAAREALEGHCIYDGGYCKLHLSYSR 292
Query: 206 HTDLSIKVNNDRSRDYTLPSTPMVNSQ-PSILGQQP--VPMVGATANQY 251
HTDL++K +D+SRDYT+P ++ +Q P+ Q P PM +A Y
Sbjct: 293 HTDLNVKAFSDKSRDYTVPDPSLLAAQGPATAWQNPQAAPMYPGSAPAY 341
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 61/104 (58%), Gaps = 10/104 (9%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + VFSAFG V KI FEK QAL+Q+ D TAS+A+ AL+G I +
Sbjct: 227 VTVDVLHTVFSAFGTVQKIAIFEKNGQTQALIQYPDIITASAAREALEGHCI------YD 280
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASG 111
G C L ++YS HTDL+VK S +SRDYT P PS + A G
Sbjct: 281 GGYCKLHLSYSRHTDLNVKAFSDKSRDYTVP----DPSLLAAQG 320
>gi|357147883|ref|XP_003574528.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
isoform 2 [Brachypodium distachyon]
Length = 313
Score = 301 bits (772), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 139/182 (76%), Positives = 160/182 (87%)
Query: 16 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 75
VFSAFGFVHKI TFEK AGFQAL+Q++D TA AKN+LDGRSIPRYLLPE++ C LRI
Sbjct: 131 VFSAFGFVHKIATFEKAAGFQALIQYTDAPTALEAKNSLDGRSIPRYLLPEHVSICHLRI 190
Query: 76 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 135
T+SAH DL++KFQSHRSRDYTNPYLPV P+AI+ QL++G DGK EPESNVLLASIEN
Sbjct: 191 TFSAHKDLNIKFQSHRSRDYTNPYLPVNPTAIEGIAQLTLGPDGKVKEPESNVLLASIEN 250
Query: 136 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 195
MQYAV +DVLH VF++FG VQKIAMF+KNGG+QALIQYPD+ TA VAK+ALEGHCIYDGG
Sbjct: 251 MQYAVGVDVLHTVFNSFGTVQKIAMFEKNGGMQALIQYPDISTAAVAKQALEGHCIYDGG 310
Query: 196 FC 197
+C
Sbjct: 311 YC 312
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/109 (49%), Positives = 70/109 (64%), Gaps = 7/109 (6%)
Query: 127 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
NVLL + E++Q V++DV+H+VFSAFG V KIA F+K G QALIQY D TA+ AK +
Sbjct: 109 NVLLVTFEDVQPNDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDAPTALEAKNS 168
Query: 186 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 228
L+G I C L I++S H DL+IK + RSRDYT P P+
Sbjct: 169 LDGRSIPRYLLPEHVSICHLRITFSAHKDLNIKFQSHRSRDYTNPYLPV 217
>gi|414870439|tpg|DAA48996.1| TPA: hypothetical protein ZEAMMB73_491521 [Zea mays]
Length = 314
Score = 300 bits (769), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 140/182 (76%), Positives = 160/182 (87%)
Query: 16 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 75
VFSAFGFVHKI TFEK AGFQAL+Q++D TA AKN+LDGRSIP+YLLPE++G C +RI
Sbjct: 132 VFSAFGFVHKIATFEKAAGFQALIQYTDAPTALEAKNSLDGRSIPKYLLPEHIGACHMRI 191
Query: 76 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 135
T+SAH DL++KFQSHRSRDYTNPYLPV +AI+ Q +VG DGK EPESNVLLASIEN
Sbjct: 192 TFSAHKDLNIKFQSHRSRDYTNPYLPVNQTAIEGIVQPTVGPDGKVKEPESNVLLASIEN 251
Query: 136 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 195
MQYAVT+DVLH VFSAFG VQKIAMF+KNGG+QALIQYPD+ TA VAK+ALEGHCIYDGG
Sbjct: 252 MQYAVTVDVLHTVFSAFGAVQKIAMFEKNGGMQALIQYPDITTAAVAKQALEGHCIYDGG 311
Query: 196 FC 197
+C
Sbjct: 312 YC 313
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 75/118 (63%), Gaps = 9/118 (7%)
Query: 127 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
NVLL + E +Q VT++V+H+VFSAFG V KIA F+K G QALIQY D TA+ AK +
Sbjct: 110 NVLLVTFEGVQPNDVTIEVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDAPTALEAKNS 169
Query: 186 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILG 237
L+G I G C + I++S H DL+IK + RSRDYT P P+ +Q +I G
Sbjct: 170 LDGRSIPKYLLPEHIGACHMRITFSAHKDLNIKFQSHRSRDYTNPYLPV--NQTAIEG 225
>gi|255584813|ref|XP_002533124.1| polypyrimidine tract binding protein, putative [Ricinus communis]
gi|223527087|gb|EEF29269.1| polypyrimidine tract binding protein, putative [Ricinus communis]
Length = 483
Score = 300 bits (769), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 184/365 (50%), Positives = 215/365 (58%), Gaps = 55/365 (15%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYL---- 63
+ + I VFSAFGFVHKI TFEK AGFQAL+QF+D ETASSA+NALDGRSIP+Y
Sbjct: 124 VSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQFTDAETASSARNALDGRSIPKYSFFSL 183
Query: 64 ---LPENMGPCTLRITYSAH-TDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDG 119
L N R T S DL RDYTNPYLPV P+AI+ Q +VG DG
Sbjct: 184 NLHLSLNSALLYSRFTQSKSLDDLQFLICLLNFRDYTNPYLPVNPTAIEGPVQPAVGPDG 243
Query: 120 KKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTA 179
KK EPESNVLLASIENMQYAVT+DV+H VFSAFG VQKIA+F+KNGG QAL+QYPDV TA
Sbjct: 244 KKKEPESNVLLASIENMQYAVTVDVIHTVFSAFGTVQKIAIFEKNGGTQALVQYPDVATA 303
Query: 180 VVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQ 239
VAKE LEGHCIYDGG+CKLH+SYSRHTDL++K +D+SRDYT+P S+L
Sbjct: 304 AVAKETLEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTIPDA-------SLLAAG 356
Query: 240 PVPMVGATANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQ------SMPMMG-NHPY 292
VP V + Q +P P+ +AA A PA Q SM G +P
Sbjct: 357 QVPGVPTAPTMWQNPQASP---MYPVNSYASAAAVTAQVPAGQVPAWNPSMEAGGPAYPS 413
Query: 293 MPPGSMP----------------------------MGPGM--MQMHMPGQSGMQHHHGAM 322
+PPG+ P M PG+ M M PG GA
Sbjct: 414 VPPGTFPGQSYPAPPPTYVSAAMPVGSSPLTQGSPMSPGVGTMPMTHPGVQSNLRPGGAS 473
Query: 323 PPPRP 327
PP +P
Sbjct: 474 PPGQP 478
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 67/117 (57%), Gaps = 15/117 (12%)
Query: 127 NVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
NVLL +IE ++ V++DV+H+VFSAFG V KIA F+K G QALIQ+ D +TA A+ A
Sbjct: 110 NVLLVTIEGVEAGDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQFTDAETASSARNA 169
Query: 186 LEGHCIYDGGF--CKLHIS------YSRHT------DLSIKVNNDRSRDYTLPSTPM 228
L+G I F LH+S YSR T DL + RDYT P P+
Sbjct: 170 LDGRSIPKYSFFSLNLHLSLNSALLYSRFTQSKSLDDLQFLICLLNFRDYTNPYLPV 226
>gi|20260638|gb|AAM13217.1| putative polypyrimidine tract-binding protein [Arabidopsis
thaliana]
gi|24899823|gb|AAN65126.1| putative polypyrimidine tract-binding protein [Arabidopsis
thaliana]
Length = 189
Score = 298 bits (763), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 138/185 (74%), Positives = 162/185 (87%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCT 72
I QVFSAFGFVHKI TFEK AGFQALVQF+D ETAS+A++ALDGRSIPRYLL ++G C+
Sbjct: 4 IGQVFSAFGFVHKIATFEKAAGFQALVQFTDVETASAARSALDGRSIPRYLLSAHVGSCS 63
Query: 73 LRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLAS 132
LR++YSAHTDL++KFQSHRSRDYTNPYLPV +A+D S Q ++G DGKK+E +SNVLL
Sbjct: 64 LRMSYSAHTDLNIKFQSHRSRDYTNPYLPVNQTAMDGSMQPALGADGKKVESQSNVLLGL 123
Query: 133 IENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 192
IENMQYAVT+DVLH VFSA+G VQKIA+F+KNG QALIQY D+ TA +AKEALEGHCIY
Sbjct: 124 IENMQYAVTVDVLHTVFSAYGTVQKIAIFEKNGSTQALIQYSDIPTAAMAKEALEGHCIY 183
Query: 193 DGGFC 197
DGG+C
Sbjct: 184 DGGYC 188
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 58/91 (63%), Gaps = 6/91 (6%)
Query: 144 VLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCI------YDGGFC 197
++ VFSAFG V KIA F+K G QAL+Q+ DV+TA A+ AL+G I G C
Sbjct: 3 IIGQVFSAFGFVHKIATFEKAAGFQALVQFTDVETASAARSALDGRSIPRYLLSAHVGSC 62
Query: 198 KLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 228
L +SYS HTDL+IK + RSRDYT P P+
Sbjct: 63 SLRMSYSAHTDLNIKFQSHRSRDYTNPYLPV 93
>gi|357119737|ref|XP_003561590.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
[Brachypodium distachyon]
Length = 522
Score = 293 bits (751), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 137/180 (76%), Positives = 158/180 (87%)
Query: 16 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 75
VFSAFGFVHKI TFEK AGFQAL+Q++D TAS+A+ ALDGRSIPRYLLPE++ C LRI
Sbjct: 136 VFSAFGFVHKIATFEKAAGFQALIQYTDAPTASAAREALDGRSIPRYLLPEHVLSCHLRI 195
Query: 76 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 135
++SAH DL++KFQSHRSRDYTNPYLPV SAID++ Q +VG DG+++E E NVLLASIEN
Sbjct: 196 SFSAHKDLNIKFQSHRSRDYTNPYLPVNSSAIDSTLQPAVGADGRRVEAEGNVLLASIEN 255
Query: 136 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 195
MQYAV++DVLH VFS FG VQKIA+F+KNGG QALIQYPDV TA VAKEALEGHCIYDGG
Sbjct: 256 MQYAVSVDVLHTVFSTFGTVQKIAIFEKNGGTQALIQYPDVTTATVAKEALEGHCIYDGG 315
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 67/135 (49%), Positives = 81/135 (60%), Gaps = 10/135 (7%)
Query: 123 EPESNVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 181
E NVLL +IE +Q + VT+DV+H+VFSAFG V KIA F+K G QALIQY D TA
Sbjct: 110 ETAGNVLLVTIEGVQASDVTIDVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDAPTASA 169
Query: 182 AKEALEGHCIYDGGF------CKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
A+EAL+G I C L IS+S H DL+IK + RSRDYT P P VNS S
Sbjct: 170 AREALDGRSIPRYLLPEHVLSCHLRISFSAHKDLNIKFQSHRSRDYTNPYLP-VNS--SA 226
Query: 236 LGQQPVPMVGATANQ 250
+ P VGA +
Sbjct: 227 IDSTLQPAVGADGRR 241
>gi|238013298|gb|ACR37684.1| unknown [Zea mays]
gi|414867005|tpg|DAA45562.1| TPA: hypothetical protein ZEAMMB73_334584 [Zea mays]
Length = 317
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 132/182 (72%), Positives = 159/182 (87%)
Query: 16 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 75
VFSAFG+VHKI TFEK AGFQAL+Q++D +TAS+A+ ALDGRSIP YLLPE++ C LRI
Sbjct: 134 VFSAFGYVHKIATFEKAAGFQALIQYTDADTASAAREALDGRSIPSYLLPEHVTSCCLRI 193
Query: 76 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 135
++SAH DL++KFQS+RSRDY NPYLP+ SA+D + Q +VG DG+K+E + NVLLASIEN
Sbjct: 194 SFSAHKDLNIKFQSNRSRDYNNPYLPINYSAMDGTLQPAVGSDGRKVEAQGNVLLASIEN 253
Query: 136 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 195
MQYAV++DVLH VFS+FG VQKIA+F+KNGG QALIQYPDV TA VAKEALEGHCIYDGG
Sbjct: 254 MQYAVSVDVLHTVFSSFGTVQKIAIFEKNGGTQALIQYPDVNTAAVAKEALEGHCIYDGG 313
Query: 196 FC 197
+C
Sbjct: 314 YC 315
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/113 (52%), Positives = 72/113 (63%), Gaps = 7/113 (6%)
Query: 123 EPESNVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 181
E NVLL +IE +Q + VT+DV+HMVFSAFG V KIA F+K G QALIQY D TA
Sbjct: 108 ETAGNVLLVTIEGVQASDVTIDVIHMVFSAFGYVHKIATFEKAAGFQALIQYTDADTASA 167
Query: 182 AKEALEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 228
A+EAL+G I C L IS+S H DL+IK ++RSRDY P P+
Sbjct: 168 AREALDGRSIPSYLLPEHVTSCCLRISFSAHKDLNIKFQSNRSRDYNNPYLPI 220
>gi|108708434|gb|ABF96229.1| Polypyrimidine tract-binding protein, putative, expressed [Oryza
sativa Japonica Group]
Length = 318
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 141/182 (77%), Positives = 160/182 (87%), Gaps = 1/182 (0%)
Query: 16 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 75
VFSAFGFVHKI TFEK AGFQAL+Q++D TAS+A+ ALDGRSIPRYLLPE++ C LRI
Sbjct: 136 VFSAFGFVHKIATFEKAAGFQALIQYTDAATASAAREALDGRSIPRYLLPEHVTSCCLRI 195
Query: 76 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 135
++SAH DL++KFQSHRSRDYTNPYLPV SAID + Q +VG DG+K+E E NVLLASIEN
Sbjct: 196 SFSAHKDLNIKFQSHRSRDYTNPYLPVNSSAID-TLQPAVGADGRKVEAEGNVLLASIEN 254
Query: 136 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 195
MQYAVT+DVLH VFSAFG VQKIA+F+KNGG QALIQYPDV TA VAKEALEGHCIYDGG
Sbjct: 255 MQYAVTVDVLHTVFSAFGTVQKIAIFEKNGGTQALIQYPDVTTASVAKEALEGHCIYDGG 314
Query: 196 FC 197
+C
Sbjct: 315 YC 316
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/131 (49%), Positives = 78/131 (59%), Gaps = 11/131 (8%)
Query: 123 EPESNVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 181
E NVLL +IE +Q VT+DV+H+VFSAFG V KIA F+K G QALIQY D TA
Sbjct: 110 ETAGNVLLVTIEGVQANDVTIDVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDAATASA 169
Query: 182 AKEALEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
A+EAL+G I C L IS+S H DL+IK + RSRDYT P P+ +S
Sbjct: 170 AREALDGRSIPRYLLPEHVTSCCLRISFSAHKDLNIKFQSHRSRDYTNPYLPVNSSAIDT 229
Query: 236 LGQQPVPMVGA 246
L P VGA
Sbjct: 230 LQ----PAVGA 236
>gi|326506386|dbj|BAJ86511.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 313
Score = 286 bits (732), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 135/182 (74%), Positives = 155/182 (85%)
Query: 16 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 75
VFSAFGFVHKI TFEK AGFQAL+Q++D TA AKN+LDGRSIPRYLL +++ C LRI
Sbjct: 131 VFSAFGFVHKIATFEKAAGFQALIQYTDAPTALEAKNSLDGRSIPRYLLADHVSICHLRI 190
Query: 76 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 135
T+SAH DL++KFQSHRSRDYTNPYLPV P+AI+ Q +G DG EPESNVLLASIEN
Sbjct: 191 TFSAHKDLNIKFQSHRSRDYTNPYLPVNPTAIEGITQPILGSDGMIKEPESNVLLASIEN 250
Query: 136 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 195
MQYAV +DVLH VFS+FG VQKIAMF+KNGG+QALIQYPD+ A VAK+ALEGHCIYDGG
Sbjct: 251 MQYAVGVDVLHTVFSSFGAVQKIAMFEKNGGMQALIQYPDITPAGVAKQALEGHCIYDGG 310
Query: 196 FC 197
+C
Sbjct: 311 YC 312
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/113 (47%), Positives = 70/113 (61%), Gaps = 7/113 (6%)
Query: 123 EPESNVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 181
+ NVLL + E +Q V++DV+H+VFSAFG V KIA F+K G QALIQY D TA+
Sbjct: 105 DSSGNVLLVTFEGVQPNDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDAPTALE 164
Query: 182 AKEALEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 228
AK +L+G I C L I++S H DL+IK + RSRDYT P P+
Sbjct: 165 AKNSLDGRSIPRYLLADHVSICHLRITFSAHKDLNIKFQSHRSRDYTNPYLPV 217
>gi|356531750|ref|XP_003534439.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
isoform 2 [Glycine max]
Length = 505
Score = 281 bits (720), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 143/234 (61%), Positives = 173/234 (73%), Gaps = 9/234 (3%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPR-----Y 62
+ + I VFSAFGFVHKI TFEKTAGFQAL+QF+D ETASSA++ALDGRSIPR
Sbjct: 124 VSIDVIHLVFSAFGFVHKIATFEKTAGFQALIQFTDAETASSARDALDGRSIPRQVALFV 183
Query: 63 LLPENMGPCTLRI----TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLD 118
P + P + + + T L DYTNP LPV +AI+ + Q +VG D
Sbjct: 184 FFPYSSTPSIILVIACQVINLLTHLFFGICLMHFLDYTNPMLPVNYTAIEGAVQTAVGPD 243
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
GK+ EPESNVLLASIENMQYAVT+DVLH VFSAFG VQKIA+F+KNG QALIQYPD+ T
Sbjct: 244 GKRKEPESNVLLASIENMQYAVTVDVLHTVFSAFGTVQKIAIFEKNGQTQALIQYPDIIT 303
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQ 232
A A+EALEGHCIYDGG+CKLH+SYSRHTDL++K +D+SRDYT+P ++ +Q
Sbjct: 304 ASAAREALEGHCIYDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTVPDPSLLAAQ 357
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 127 NVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
NVLL +IE ++ V++DV+H+VFSAFG V KIA F+K G QALIQ+ D +TA A++A
Sbjct: 110 NVLLVTIEGVEAGDVSIDVIHLVFSAFGFVHKIATFEKTAGFQALIQFTDAETASSARDA 169
Query: 186 LEGHCI 191
L+G I
Sbjct: 170 LDGRSI 175
>gi|207174028|gb|ACI23510.1| putative polypyrimidine tract-binding protein 2 [Triticum
monococcum]
gi|207174032|gb|ACI23512.1| putative polypyrimidine tract-binding protein 2 [Triticum urartu]
Length = 200
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 132/193 (68%), Positives = 158/193 (81%), Gaps = 5/193 (2%)
Query: 62 YLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKK 121
YLLPE G CTLRI YSAH+ L+VKFQSHRSRDYTNPYLP+APSAID SG +DGKK
Sbjct: 1 YLLPELDGSCTLRINYSAHSVLNVKFQSHRSRDYTNPYLPLAPSAIDGSG-----VDGKK 55
Query: 122 LEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 181
EPESNVLLAS+ENMQY VT+D LH VFSAFG VQKIA+F+KN G ALIQYPD+QTAV
Sbjct: 56 EEPESNVLLASVENMQYIVTIDALHEVFSAFGFVQKIAIFEKNSGFHALIQYPDIQTAVK 115
Query: 182 AKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPV 241
A+EALEGH IY+GG+CKLH+++SRHTDL++++NN+R RDYT ++ N +PSILG QP+
Sbjct: 116 AREALEGHSIYEGGYCKLHLAFSRHTDLNVRINNERGRDYTGGNSAPANHEPSILGPQPM 175
Query: 242 PMVGATANQYNGA 254
G+TA Y+ A
Sbjct: 176 LAAGSTAPPYSSA 188
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 57/90 (63%), Gaps = 6/90 (6%)
Query: 7 LLKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPE 66
++ + + +VFSAFGFV KI FEK +GF AL+Q+ D +TA A+ AL+G SI
Sbjct: 73 IVTIDALHEVFSAFGFVQKIAIFEKNSGFHALIQYPDIQTAVKAREALEGHSI------Y 126
Query: 67 NMGPCTLRITYSAHTDLSVKFQSHRSRDYT 96
G C L + +S HTDL+V+ + R RDYT
Sbjct: 127 EGGYCKLHLAFSRHTDLNVRINNERGRDYT 156
>gi|207174030|gb|ACI23511.1| putative polypyrimidine tract-binding protein 2 [Aegilops
speltoides]
Length = 200
Score = 274 bits (701), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 131/193 (67%), Positives = 157/193 (81%), Gaps = 5/193 (2%)
Query: 62 YLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKK 121
YLLPE G CTLRI YSAH+ L+VKFQSHRSRDYTNPYLP+APSAID SG +DGKK
Sbjct: 1 YLLPELDGSCTLRINYSAHSVLNVKFQSHRSRDYTNPYLPLAPSAIDGSG-----VDGKK 55
Query: 122 LEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 181
E ESNVLLAS+ENMQY VT+D LH VFSAFG VQKIA+F+KN G ALIQYPD+QTAV
Sbjct: 56 EEAESNVLLASVENMQYIVTIDALHEVFSAFGFVQKIAIFEKNSGFHALIQYPDIQTAVK 115
Query: 182 AKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPV 241
A+EALEGH IY+GG+CKLH+++SRHTDL++++NN+R RDYT ++ N +PSILG QP+
Sbjct: 116 AREALEGHSIYEGGYCKLHLAFSRHTDLNVRINNERGRDYTGGNSAPANHEPSILGPQPI 175
Query: 242 PMVGATANQYNGA 254
G+TA Y+ A
Sbjct: 176 LAAGSTAPPYSSA 188
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 53/82 (64%), Gaps = 6/82 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
+VFSAFGFV KI FEK +GF AL+Q+ D +TA A+ AL+G SI G C L
Sbjct: 81 EVFSAFGFVQKIAIFEKNSGFHALIQYPDIQTAVKAREALEGHSI------YEGGYCKLH 134
Query: 75 ITYSAHTDLSVKFQSHRSRDYT 96
+ +S HTDL+V+ + R RDYT
Sbjct: 135 LAFSRHTDLNVRINNERGRDYT 156
>gi|207174026|gb|ACI23509.1| putative polypyrimidine tract-binding protein 2 [Secale cereale]
Length = 200
Score = 271 bits (693), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 131/193 (67%), Positives = 158/193 (81%), Gaps = 5/193 (2%)
Query: 62 YLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKK 121
YLLPE G CTLRI YSAH+ L+VKFQSHRSRDYTNPYLP+APSAID SG +DGKK
Sbjct: 1 YLLPELDGSCTLRINYSAHSVLNVKFQSHRSRDYTNPYLPLAPSAIDGSG-----VDGKK 55
Query: 122 LEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 181
E ESNVLLAS+ENMQY VT+D LH VFSA+G VQKIA+F+KN G ALIQYPD+QTAV
Sbjct: 56 EEAESNVLLASVENMQYIVTIDALHEVFSAYGFVQKIAIFEKNSGFHALIQYPDIQTAVK 115
Query: 182 AKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPV 241
A+EALEGH IY+GG+CKLH+++SRHTDL++++NN+R RDYT ++ N +PSILG QP+
Sbjct: 116 AREALEGHSIYEGGYCKLHLAFSRHTDLNVRINNERGRDYTGGNSAPANHEPSILGPQPM 175
Query: 242 PMVGATANQYNGA 254
VG+TA Y+ A
Sbjct: 176 LPVGSTAPPYSSA 188
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 57/90 (63%), Gaps = 6/90 (6%)
Query: 7 LLKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPE 66
++ + + +VFSA+GFV KI FEK +GF AL+Q+ D +TA A+ AL+G SI
Sbjct: 73 IVTIDALHEVFSAYGFVQKIAIFEKNSGFHALIQYPDIQTAVKAREALEGHSI------Y 126
Query: 67 NMGPCTLRITYSAHTDLSVKFQSHRSRDYT 96
G C L + +S HTDL+V+ + R RDYT
Sbjct: 127 EGGYCKLHLAFSRHTDLNVRINNERGRDYT 156
>gi|356541547|ref|XP_003539236.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
[Glycine max]
Length = 447
Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 134/218 (61%), Positives = 168/218 (77%), Gaps = 12/218 (5%)
Query: 16 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 75
VFS FGFV KI+TFEK A FQA+VQF D +TASSAK+ALDG+SIPRYLLP + C LRI
Sbjct: 135 VFSEFGFVQKISTFEKNACFQAMVQFPDVKTASSAKDALDGKSIPRYLLPNYVCDCNLRI 194
Query: 76 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEP-ESNVLLASIE 134
TYSAH DL++KFQS+R+RDYTNP LPV ++ID + ++P E++VL AS E
Sbjct: 195 TYSAHQDLTIKFQSNRTRDYTNPTLPVNQTSID-----------RAIQPFENHVLWASFE 243
Query: 135 NMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDG 194
NMQY VT+DVLH VFS +G VQKI++F+KNG ALIQYPD+ TA AK+AL GHCIYDG
Sbjct: 244 NMQYDVTVDVLHSVFSEYGTVQKISIFEKNGQTHALIQYPDIATATAAKKALMGHCIYDG 303
Query: 195 GFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQ 232
G CKL +SYS HTD+++K ++D+SRDYT+P+ + Q
Sbjct: 304 GCCKLRLSYSHHTDINVKGSSDKSRDYTMPNHGVFEEQ 341
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/119 (46%), Positives = 80/119 (67%), Gaps = 11/119 (9%)
Query: 125 ESNVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAK 183
+ N+L+ ++E +Q V +DV+H+VFS FG VQKI+ F+KN QA++Q+PDV+TA AK
Sbjct: 111 KGNILIVTMEGIQAGDVGIDVIHLVFSEFGFVQKISTFEKNACFQAMVQFPDVKTASSAK 170
Query: 184 EALEGHCI-------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
+AL+G I Y C L I+YS H DL+IK ++R+RDYT P+ P+ +Q SI
Sbjct: 171 DALDGKSIPRYLLPNYVCD-CNLRITYSAHQDLTIKFQSNRTRDYTNPTLPV--NQTSI 226
>gi|356568680|ref|XP_003552538.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
isoform 3 [Glycine max]
Length = 304
Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 122/161 (75%), Positives = 142/161 (88%)
Query: 16 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 75
VFSAFGFVHKI TFEKTAGFQAL+QF+D ETASSA++ALDGRSIPRYLLP ++G C LRI
Sbjct: 132 VFSAFGFVHKIATFEKTAGFQALIQFTDAETASSARDALDGRSIPRYLLPAHVGSCNLRI 191
Query: 76 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 135
+YSAH DL++KFQS+RSRDYTNP LPV +AI+ + Q +VG DGK+ EP+SNVLLASIEN
Sbjct: 192 SYSAHKDLNIKFQSNRSRDYTNPMLPVNYTAIEGAVQTAVGPDGKRKEPDSNVLLASIEN 251
Query: 136 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDV 176
MQYAVT+DVLH VFSAFG VQKIA+F+KNG QALIQYP +
Sbjct: 252 MQYAVTVDVLHTVFSAFGTVQKIAIFEKNGQTQALIQYPGI 292
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 73/109 (66%), Gaps = 7/109 (6%)
Query: 127 NVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
NVLL +IE ++ V++DV+H+VFSAFG V KIA F+K G QALIQ+ D +TA A++A
Sbjct: 110 NVLLVTIEGVEAGDVSIDVIHLVFSAFGFVHKIATFEKTAGFQALIQFTDAETASSARDA 169
Query: 186 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 228
L+G I G C L ISYS H DL+IK ++RSRDYT P P+
Sbjct: 170 LDGRSIPRYLLPAHVGSCNLRISYSAHKDLNIKFQSNRSRDYTNPMLPV 218
>gi|414870437|tpg|DAA48994.1| TPA: hypothetical protein ZEAMMB73_491521 [Zea mays]
Length = 227
Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 122/160 (76%), Positives = 140/160 (87%)
Query: 16 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 75
VFSAFGFVHKI TFEK AGFQAL+Q++D TA AKN+LDGRSIP+YLLPE++G C +RI
Sbjct: 63 VFSAFGFVHKIATFEKAAGFQALIQYTDAPTALEAKNSLDGRSIPKYLLPEHIGACHMRI 122
Query: 76 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 135
T+SAH DL++KFQSHRSRDYTNPYLPV +AI+ Q +VG DGK EPESNVLLASIEN
Sbjct: 123 TFSAHKDLNIKFQSHRSRDYTNPYLPVNQTAIEGIVQPTVGPDGKVKEPESNVLLASIEN 182
Query: 136 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPD 175
MQYAVT+DVLH VFSAFG VQKIAMF+KNGG+QALIQYP+
Sbjct: 183 MQYAVTVDVLHTVFSAFGAVQKIAMFEKNGGMQALIQYPE 222
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 75/118 (63%), Gaps = 9/118 (7%)
Query: 127 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
NVLL + E +Q VT++V+H+VFSAFG V KIA F+K G QALIQY D TA+ AK +
Sbjct: 41 NVLLVTFEGVQPNDVTIEVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDAPTALEAKNS 100
Query: 186 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILG 237
L+G I G C + I++S H DL+IK + RSRDYT P P+ +Q +I G
Sbjct: 101 LDGRSIPKYLLPEHIGACHMRITFSAHKDLNIKFQSHRSRDYTNPYLPV--NQTAIEG 156
>gi|219363125|ref|NP_001137030.1| uncharacterized protein LOC100217199 [Zea mays]
gi|194698066|gb|ACF83117.1| unknown [Zea mays]
gi|414870440|tpg|DAA48997.1| TPA: hypothetical protein ZEAMMB73_491521 [Zea mays]
Length = 296
Score = 258 bits (659), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 122/160 (76%), Positives = 140/160 (87%)
Query: 16 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 75
VFSAFGFVHKI TFEK AGFQAL+Q++D TA AKN+LDGRSIP+YLLPE++G C +RI
Sbjct: 132 VFSAFGFVHKIATFEKAAGFQALIQYTDAPTALEAKNSLDGRSIPKYLLPEHIGACHMRI 191
Query: 76 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 135
T+SAH DL++KFQSHRSRDYTNPYLPV +AI+ Q +VG DGK EPESNVLLASIEN
Sbjct: 192 TFSAHKDLNIKFQSHRSRDYTNPYLPVNQTAIEGIVQPTVGPDGKVKEPESNVLLASIEN 251
Query: 136 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPD 175
MQYAVT+DVLH VFSAFG VQKIAMF+KNGG+QALIQYP+
Sbjct: 252 MQYAVTVDVLHTVFSAFGAVQKIAMFEKNGGMQALIQYPE 291
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 75/118 (63%), Gaps = 9/118 (7%)
Query: 127 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
NVLL + E +Q VT++V+H+VFSAFG V KIA F+K G QALIQY D TA+ AK +
Sbjct: 110 NVLLVTFEGVQPNDVTIEVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDAPTALEAKNS 169
Query: 186 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILG 237
L+G I G C + I++S H DL+IK + RSRDYT P P+ +Q +I G
Sbjct: 170 LDGRSIPKYLLPEHIGACHMRITFSAHKDLNIKFQSHRSRDYTNPYLPV--NQTAIEG 225
>gi|194695192|gb|ACF81680.1| unknown [Zea mays]
gi|414870435|tpg|DAA48992.1| TPA: hypothetical protein ZEAMMB73_491521 [Zea mays]
gi|414870436|tpg|DAA48993.1| TPA: hypothetical protein ZEAMMB73_491521 [Zea mays]
Length = 276
Score = 257 bits (657), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 124/169 (73%), Positives = 144/169 (85%), Gaps = 3/169 (1%)
Query: 73 LRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLAS 132
+RIT+SAH DL++KFQSHRSRDYTNPYLPV +AI+ Q +VG DGK EPESNVLLAS
Sbjct: 1 MRITFSAHKDLNIKFQSHRSRDYTNPYLPVNQTAIEGIVQPTVGPDGKVKEPESNVLLAS 60
Query: 133 IENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 192
IENMQYAVT+DVLH VFSAFG VQKIAMF+KNGG+QALIQYPD+ TA VAK+ALEGHCIY
Sbjct: 61 IENMQYAVTVDVLHTVFSAFGAVQKIAMFEKNGGMQALIQYPDITTAAVAKQALEGHCIY 120
Query: 193 DGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPV 241
DGG+CKLH+SYSRHTDL++K +++RSRDYTL S P V Q + Q PV
Sbjct: 121 DGGYCKLHLSYSRHTDLNVKAHDERSRDYTL-SDPNVQLQAA--AQTPV 166
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 54/89 (60%), Gaps = 6/89 (6%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + VFSAFG V KI FEK G QAL+Q+ D TA+ AK AL+G I +
Sbjct: 68 VTVDVLHTVFSAFGAVQKIAMFEKNGGMQALIQYPDITTAAVAKQALEGHCI------YD 121
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYT 96
G C L ++YS HTDL+VK RSRDYT
Sbjct: 122 GGYCKLHLSYSRHTDLNVKAHDERSRDYT 150
>gi|195622556|gb|ACG33108.1| hypothetical protein [Zea mays]
Length = 276
Score = 257 bits (656), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 124/169 (73%), Positives = 144/169 (85%), Gaps = 3/169 (1%)
Query: 73 LRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLAS 132
+RIT+SAH DL++KFQSHRSRDYTNPYLPV +AI+ Q +VG DGK EPESNVLLAS
Sbjct: 1 MRITFSAHKDLNIKFQSHRSRDYTNPYLPVNQTAIEGIVQPTVGPDGKVKEPESNVLLAS 60
Query: 133 IENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 192
IENMQYAVT+DVLH VFSAFG VQKIAMF+KNGG+QALIQYPD+ TA VAK+ALEGHCIY
Sbjct: 61 IENMQYAVTVDVLHTVFSAFGAVQKIAMFEKNGGMQALIQYPDITTAAVAKQALEGHCIY 120
Query: 193 DGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPV 241
DGG+CKLH+SYSRHTDL++K +++RSRDYTL S P V Q + Q PV
Sbjct: 121 DGGYCKLHLSYSRHTDLNVKAHDERSRDYTL-SDPNVQLQAA--AQTPV 166
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 54/89 (60%), Gaps = 6/89 (6%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + VFSAFG V KI FEK G QAL+Q+ D TA+ AK AL+G I +
Sbjct: 68 VTVDVLHTVFSAFGAVQKIAMFEKNGGMQALIQYPDITTAAVAKQALEGHCI------YD 121
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYT 96
G C L ++YS HTDL+VK RSRDYT
Sbjct: 122 GGYCKLHLSYSRHTDLNVKAHDERSRDYT 150
>gi|255636160|gb|ACU18422.1| unknown [Glycine max]
Length = 304
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 121/161 (75%), Positives = 141/161 (87%)
Query: 16 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 75
VFSAFGFVHKI TFEKTAGFQAL+QF+D ETASSA++ALDGRSIPRYLLP ++G C LRI
Sbjct: 132 VFSAFGFVHKIATFEKTAGFQALIQFTDAETASSARDALDGRSIPRYLLPAHVGSCNLRI 191
Query: 76 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 135
+YSAH DL++KFQS+RS DYTNP LPV +AI+ + Q +VG DGK+ EP+SNVLLASIEN
Sbjct: 192 SYSAHKDLNIKFQSNRSGDYTNPMLPVNYTAIEGAVQTAVGPDGKRKEPDSNVLLASIEN 251
Query: 136 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDV 176
MQYAVT+DVLH VFSAFG VQKIA+F+KNG QALIQYP +
Sbjct: 252 MQYAVTVDVLHTVFSAFGTVQKIAIFEKNGQTQALIQYPGI 292
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/109 (50%), Positives = 72/109 (66%), Gaps = 7/109 (6%)
Query: 127 NVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
NVLL +IE ++ V++DV+H+VFSAFG V KIA F+K G QALIQ+ D +TA A++A
Sbjct: 110 NVLLVTIEGVEAGDVSIDVIHLVFSAFGFVHKIATFEKTAGFQALIQFTDAETASSARDA 169
Query: 186 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 228
L+G I G C L ISYS H DL+IK ++RS DYT P P+
Sbjct: 170 LDGRSIPRYLLPAHVGSCNLRISYSAHKDLNIKFQSNRSGDYTNPMLPV 218
>gi|384245764|gb|EIE19256.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 443
Score = 248 bits (632), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 129/210 (61%), Positives = 152/210 (72%), Gaps = 4/210 (1%)
Query: 16 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 75
VFSAFG V KI TFEK GFQALVQ++D ETA + ALDGR IP++LL + P +L+I
Sbjct: 131 VFSAFGLVQKIATFEKGQGFQALVQYADAETAEQVRLALDGRHIPKHLLNDTPNPPSLKI 190
Query: 76 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVG--LDGKKLEPESNVLLASI 133
TYS HTDL+VKFQSHRSRDYTN YLP AP+ D + L + + G L E NVLL I
Sbjct: 191 TYSQHTDLNVKFQSHRSRDYTNLYLPAAPAGGDPNLALGIQAPISGNPL--EGNVLLCQI 248
Query: 134 ENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYD 193
EN Y V +D L+ VFS +G VQKIA+FDKNG QALIQYPD +A AK ALEGH IYD
Sbjct: 249 ENQAYPVNVDALNTVFSPYGFVQKIAIFDKNGQSQALIQYPDPLSATNAKSALEGHAIYD 308
Query: 194 GGFCKLHISYSRHTDLSIKVNNDRSRDYTL 223
GG+ +L ISYS H +L++K NNDRS DYTL
Sbjct: 309 GGYNRLKISYSVHRNLNVKANNDRSCDYTL 338
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/119 (49%), Positives = 75/119 (63%), Gaps = 11/119 (9%)
Query: 120 KKLEPESNVLLASIENM--QYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 177
+ E NVLL S+EN+ VTLD LH+VFSAFG VQKIA F+K G QAL+QY D +
Sbjct: 101 RSAEQGGNVLLVSLENLAPDMNVTLDTLHLVFSAFGLVQKIATFEKGQGFQALVQYADAE 160
Query: 178 TAVVAKEALEG-----HCIYDG-GFCKLHISYSRHTDLSIKVNNDRSRDYT---LPSTP 227
TA + AL+G H + D L I+YS+HTDL++K + RSRDYT LP+ P
Sbjct: 161 TAEQVRLALDGRHIPKHLLNDTPNPPSLKITYSQHTDLNVKFQSHRSRDYTNLYLPAAP 219
>gi|108708435|gb|ABF96230.1| Polypyrimidine tract-binding protein, putative, expressed [Oryza
sativa Japonica Group]
Length = 300
Score = 246 bits (627), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 121/161 (75%), Positives = 141/161 (87%), Gaps = 1/161 (0%)
Query: 16 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 75
VFSAFGFVHKI TFEK AGFQAL+Q++D TAS+A+ ALDGRSIPRYLLPE++ C LRI
Sbjct: 136 VFSAFGFVHKIATFEKAAGFQALIQYTDAATASAAREALDGRSIPRYLLPEHVTSCCLRI 195
Query: 76 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 135
++SAH DL++KFQSHRSRDYTNPYLPV SAID + Q +VG DG+K+E E NVLLASIEN
Sbjct: 196 SFSAHKDLNIKFQSHRSRDYTNPYLPVNSSAID-TLQPAVGADGRKVEAEGNVLLASIEN 254
Query: 136 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDV 176
MQYAVT+DVLH VFSAFG VQKIA+F+KNGG QALIQYP++
Sbjct: 255 MQYAVTVDVLHTVFSAFGTVQKIAIFEKNGGTQALIQYPEI 295
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/131 (49%), Positives = 78/131 (59%), Gaps = 11/131 (8%)
Query: 123 EPESNVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 181
E NVLL +IE +Q VT+DV+H+VFSAFG V KIA F+K G QALIQY D TA
Sbjct: 110 ETAGNVLLVTIEGVQANDVTIDVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDAATASA 169
Query: 182 AKEALEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
A+EAL+G I C L IS+S H DL+IK + RSRDYT P P+ +S
Sbjct: 170 AREALDGRSIPRYLLPEHVTSCCLRISFSAHKDLNIKFQSHRSRDYTNPYLPVNSSAIDT 229
Query: 236 LGQQPVPMVGA 246
L P VGA
Sbjct: 230 LQ----PAVGA 236
>gi|357501945|ref|XP_003621261.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
gi|355496276|gb|AES77479.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
Length = 592
Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 120/184 (65%), Positives = 142/184 (77%), Gaps = 22/184 (11%)
Query: 16 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 75
VFSAFGFVHKI TFEKTAGFQAL+QF+D ETA+SA++ALDGRSIPRYLLPE++G C LRI
Sbjct: 399 VFSAFGFVHKIATFEKTAGFQALIQFTDAETAASARDALDGRSIPRYLLPEHVGSCNLRI 458
Query: 76 TYSAHTDLSVKFQSHRSR----------------------DYTNPYLPVAPSAIDASGQL 113
+YSAH DL++KFQS+RS DYTNP LPV SAI+ + Q
Sbjct: 459 SYSAHRDLNIKFQSNRSSLSICPGDDQVLLFYRLGVTEAWDYTNPMLPVNHSAIEGAAQP 518
Query: 114 SVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQY 173
++G DGK++E ESNVLLASIENMQYAVT+DV++ VFSAFG VQKIAMF+KNG QALIQY
Sbjct: 519 AIGPDGKRIETESNVLLASIENMQYAVTVDVINTVFSAFGTVQKIAMFEKNGQTQALIQY 578
Query: 174 PDVQ 177
P +
Sbjct: 579 PGIN 582
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 50/78 (64%), Gaps = 6/78 (7%)
Query: 147 MVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCI------YDGGFCKLH 200
+VFSAFG V KIA F+K G QALIQ+ D +TA A++AL+G I G C L
Sbjct: 398 VVFSAFGFVHKIATFEKTAGFQALIQFTDAETAASARDALDGRSIPRYLLPEHVGSCNLR 457
Query: 201 ISYSRHTDLSIKVNNDRS 218
ISYS H DL+IK ++RS
Sbjct: 458 ISYSAHRDLNIKFQSNRS 475
>gi|336244421|gb|AEI28160.1| polypyrimidine tract-binding protein 1 [Lobularia maritima]
Length = 126
Score = 207 bits (528), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 94/126 (74%), Positives = 111/126 (88%)
Query: 73 LRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLAS 132
LR++YSAHTDL++KFQSHRSRDYTNPYLPV +A+D S Q ++G DGKK+E +SNVLLA
Sbjct: 1 LRMSYSAHTDLNIKFQSHRSRDYTNPYLPVNHTAMDGSMQPALGADGKKVETQSNVLLAL 60
Query: 133 IENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 192
IENMQYAVT+DVLH VFSA+G VQKIA+F+KNG QALIQY D+ TA +AKEALEGHCIY
Sbjct: 61 IENMQYAVTVDVLHTVFSAYGTVQKIAIFEKNGSTQALIQYADIATAAIAKEALEGHCIY 120
Query: 193 DGGFCK 198
DGG+CK
Sbjct: 121 DGGYCK 126
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 30/44 (68%)
Query: 16 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSI 59
VFSA+G V KI FEK QAL+Q++D TA+ AK AL+G I
Sbjct: 76 VFSAYGTVQKIAIFEKNGSTQALIQYADIATAAIAKEALEGHCI 119
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 22/30 (73%)
Query: 199 LHISYSRHTDLSIKVNNDRSRDYTLPSTPM 228
L +SYS HTDL+IK + RSRDYT P P+
Sbjct: 1 LRMSYSAHTDLNIKFQSHRSRDYTNPYLPV 30
>gi|313757918|gb|ADR78667.1| polypyrimidine tract-binding protein 1 [Matthiola longipetala
subsp. bicornis]
Length = 125
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 92/124 (74%), Positives = 108/124 (87%)
Query: 71 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLL 130
C LR++YSAHTDL++KFQSHRSRDYTNPYLPV +A+D S Q ++G DGKK+E +SNVLL
Sbjct: 2 CNLRMSYSAHTDLNIKFQSHRSRDYTNPYLPVNHTAMDGSMQPALGADGKKVETQSNVLL 61
Query: 131 ASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHC 190
A IENMQYAVT+DVLH VFSA+G VQKIA+F+KNG QALIQY D+ TA +AKEALEGHC
Sbjct: 62 ALIENMQYAVTVDVLHTVFSAYGTVQKIAIFEKNGSTQALIQYSDIPTAAMAKEALEGHC 121
Query: 191 IYDG 194
IYDG
Sbjct: 122 IYDG 125
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 30/44 (68%)
Query: 16 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSI 59
VFSA+G V KI FEK QAL+Q+SD TA+ AK AL+G I
Sbjct: 79 VFSAYGTVQKIAIFEKNGSTQALIQYSDIPTAAMAKEALEGHCI 122
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 23/32 (71%)
Query: 197 CKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 228
C L +SYS HTDL+IK + RSRDYT P P+
Sbjct: 2 CNLRMSYSAHTDLNIKFQSHRSRDYTNPYLPV 33
>gi|165940573|gb|ABY75231.1| polypyrimidine tract-binding protein-like protein [Salvia
officinalis]
Length = 181
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 93/124 (75%), Positives = 108/124 (87%)
Query: 16 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 75
VFSAFGFVHKI TFEK AGFQAL+Q+SD +TAS+A+++LDGRSIPRYLLP ++ C LRI
Sbjct: 58 VFSAFGFVHKIATFEKAAGFQALIQYSDVQTASTARDSLDGRSIPRYLLPSHVSECYLRI 117
Query: 76 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 135
+YSAHTDL++KFQSHRSRDYTNP+LPV P+A+D Q VG DGKK E ESNVLLASIEN
Sbjct: 118 SYSAHTDLNIKFQSHRSRDYTNPHLPVNPTAMDGLLQPVVGPDGKKKEFESNVLLASIEN 177
Query: 136 MQYA 139
MQYA
Sbjct: 178 MQYA 181
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/126 (49%), Positives = 80/126 (63%), Gaps = 10/126 (7%)
Query: 127 NVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
NVLL +IE ++ V++DV+H+VFSAFG V KIA F+K G QALIQY DVQTA A+++
Sbjct: 36 NVLLVTIEGVEAGDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQYSDVQTASTARDS 95
Query: 186 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQ 239
L+G I C L ISYS HTDL+IK + RSRDYT P P+ P+ +
Sbjct: 96 LDGRSIPRYLLPSHVSECYLRISYSAHTDLNIKFQSHRSRDYTNPHLPV---NPTAMDGL 152
Query: 240 PVPMVG 245
P+VG
Sbjct: 153 LQPVVG 158
>gi|313757916|gb|ADR78666.1| polypyrimidine tract-binding protein 1 [Iberis amara]
Length = 120
Score = 190 bits (483), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 88/120 (73%), Positives = 105/120 (87%)
Query: 74 RITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASI 133
R++YSAHTDL++KFQSHRSRDYTNPYLPV +A+D S Q ++G DGKK+E +SNVLLA I
Sbjct: 1 RMSYSAHTDLNIKFQSHRSRDYTNPYLPVNHTAMDGSMQPALGADGKKIETQSNVLLALI 60
Query: 134 ENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYD 193
ENMQYAVT+DVLH VFSA+G +QKIA+F+KNG QALIQY D+ TA +AKEALEGHCIYD
Sbjct: 61 ENMQYAVTVDVLHTVFSAYGTLQKIAIFEKNGSTQALIQYSDJPTAQIAKEALEGHCIYD 120
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 29/44 (65%)
Query: 16 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSI 59
VFSA+G + KI FEK QAL+Q+SD TA AK AL+G I
Sbjct: 75 VFSAYGTLQKIAIFEKNGSTQALIQYSDJPTAQIAKEALEGHCI 118
Score = 38.1 bits (87), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 21/28 (75%)
Query: 201 ISYSRHTDLSIKVNNDRSRDYTLPSTPM 228
+SYS HTDL+IK + RSRDYT P P+
Sbjct: 2 MSYSAHTDLNIKFQSHRSRDYTNPYLPV 29
>gi|313757914|gb|ADR78665.1| polypyrimidine tract-binding protein 1 [Lepidium sativum]
Length = 116
Score = 183 bits (465), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 85/116 (73%), Positives = 99/116 (85%)
Query: 86 KFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVL 145
KFQSHRSRDYTNPYLPV +A+D S Q ++G DGKK+E +SNVLL IENMQYAVT+DVL
Sbjct: 1 KFQSHRSRDYTNPYLPVNHTAMDGSMQPALGADGKKVESQSNVLLGLIENMQYAVTVDVL 60
Query: 146 HMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHI 201
H VFSA+G VQKIA+F+KNG QALIQY D+ TA +AKEALEGHCIYDGG+CKL +
Sbjct: 61 HTVFSAYGTVQKIAIFEKNGSTQALIQYSDIPTAAMAKEALEGHCIYDGGYCKLRL 116
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 36/60 (60%), Gaps = 6/60 (10%)
Query: 16 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 75
VFSA+G V KI FEK QAL+Q+SD TA+ AK AL+G I + G C LR+
Sbjct: 63 VFSAYGTVQKIAIFEKNGSTQALIQYSDIPTAAMAKEALEGHCI------YDGGYCKLRL 116
>gi|414881409|tpg|DAA58540.1| TPA: hypothetical protein ZEAMMB73_710436 [Zea mays]
gi|414881410|tpg|DAA58541.1| TPA: hypothetical protein ZEAMMB73_710436 [Zea mays]
Length = 314
Score = 167 bits (423), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 87/161 (54%), Positives = 106/161 (65%), Gaps = 30/161 (18%)
Query: 136 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 195
MQY VT+DVLH VFSAFG VQKIA+F+KNG QALIQYPD+QTA AKEALEGH IY+GG
Sbjct: 1 MQYVVTIDVLHEVFSAFGFVQKIAIFEKNG-FQALIQYPDIQTAYAAKEALEGHSIYEGG 59
Query: 196 FCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQYNGAQ 255
+CKLH+++SRHT+L++KVNN+R RDYT + + QPSILG QP+P VGA
Sbjct: 60 YCKLHLTFSRHTELNVKVNNERGRDYTKGNATPSSDQPSILGPQPIPSVGA--------- 110
Query: 256 FAPPPPEQPMMHQPTAAGWGAVPPASQSMPMMGNHPYMPPG 296
A+PPA S+P + MPPG
Sbjct: 111 --------------------AIPPAQGSVPSAATNSVMPPG 131
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 59/91 (64%), Gaps = 7/91 (7%)
Query: 7 LLKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPE 66
++ + + +VFSAFGFV KI FEK GFQAL+Q+ D +TA +AK AL+G SI
Sbjct: 4 VVTIDVLHEVFSAFGFVQKIAIFEKN-GFQALIQYPDIQTAYAAKEALEGHSI------Y 56
Query: 67 NMGPCTLRITYSAHTDLSVKFQSHRSRDYTN 97
G C L +T+S HT+L+VK + R RDYT
Sbjct: 57 EGGYCKLHLTFSRHTELNVKVNNERGRDYTK 87
>gi|307103430|gb|EFN51690.1| hypothetical protein CHLNCDRAFT_139935 [Chlorella variabilis]
Length = 353
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/198 (43%), Positives = 119/198 (60%), Gaps = 14/198 (7%)
Query: 2 CLTLSLLKVIFILQVFSAFGFVHKITTFEK-TAGFQALVQFSDTETASSAKNALDGRSIP 60
+TL LL VF A GFV K+ T+ K G A VQF D +TA++ +N L G+ IP
Sbjct: 161 AVTLDLLN-----SVFGAHGFVKKLVTYAKPEGGVVAWVQFPDAQTAATVRNTLQGQPIP 215
Query: 61 RYLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAP---SAIDASGQLSVGL 117
R+LL ++ P L + ++A DL+++ QS+ +RDYTN +P S I A S G
Sbjct: 216 RHLLNDHPNPPVLDMAFAAQPDLAIRAQSYCTRDYTNAAIPWGEPDLSMIQAMLPSSGGT 275
Query: 118 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 177
DG SNVL S + M Y VT+D +H +FS +G VQKI +F+++G AL+QY DV
Sbjct: 276 DGP-----SNVLSVSFDQMTYPVTVDGVHTIFSTYGFVQKIHIFERDGRTVALVQYADVA 330
Query: 178 TAVVAKEALEGHCIYDGG 195
TA A+ ALEGH +YDGG
Sbjct: 331 TADSARAALEGHAMYDGG 348
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 70/131 (53%), Gaps = 12/131 (9%)
Query: 128 VLLASIENMQ----YAVTLDVLHMVFSAFGPVQKIAMFDK-NGGLQALIQYPDVQTAVVA 182
VL ++ N+Q AVTLD+L+ VF A G V+K+ + K GG+ A +Q+PD QTA
Sbjct: 146 VLQVNVINIQPDLAQAVTLDLLNSVFGAHGFVKKLVTYAKPEGGVVAWVQFPDAQTAATV 205
Query: 183 KEALEG-----HCIYDG-GFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSIL 236
+ L+G H + D L ++++ DL+I+ + +RDYT + P S++
Sbjct: 206 RNTLQGQPIPRHLLNDHPNPPVLDMAFAAQPDLAIRAQSYCTRDYTNAAIPWGEPDLSMI 265
Query: 237 GQQPVPMVGAT 247
Q +P G T
Sbjct: 266 -QAMLPSSGGT 275
>gi|413955319|gb|AFW87968.1| hypothetical protein ZEAMMB73_683995, partial [Zea mays]
Length = 81
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/81 (70%), Positives = 69/81 (85%)
Query: 94 DYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFG 153
DY NPYLP+ SA+D + Q +VG DG+++E + NVLLASIENMQYAVT+DVLH VFS+FG
Sbjct: 1 DYNNPYLPINYSAMDGTLQPAVGADGRQVEAQGNVLLASIENMQYAVTVDVLHTVFSSFG 60
Query: 154 PVQKIAMFDKNGGLQALIQYP 174
VQKIA+F+KNGG QALIQYP
Sbjct: 61 SVQKIAIFEKNGGTQALIQYP 81
>gi|66472746|ref|NP_001018313.1| polypyrimidine tract binding protein 1a [Danio rerio]
gi|63100731|gb|AAH95372.1| Polypyrimidine tract binding protein 1a [Danio rerio]
Length = 574
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 65/136 (47%), Positives = 83/136 (61%), Gaps = 1/136 (0%)
Query: 103 APSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFD 162
A +A+ G +DG + +S VL +EN+ Y VTLDVLH +FS FG V KI F
Sbjct: 168 AVNAVQTGGMSLAAIDGAGMGSQSPVLRVIVENLFYPVTLDVLHQIFSKFGTVLKIITFT 227
Query: 163 KNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 222
KN QAL+QY D TA AK +L+G IY+ C L IS+S+ T L++K NND+SRDYT
Sbjct: 228 KNNQFQALVQYSDGMTAQHAKLSLDGQNIYN-ACCTLRISFSKLTSLNVKYNNDKSRDYT 286
Query: 223 LPSTPMVNSQPSILGQ 238
P P +SQPS Q
Sbjct: 287 RPDLPTGDSQPSFDAQ 302
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 57/91 (62%), Gaps = 7/91 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQALVQ+SD TA AK +LDG++I CTLR
Sbjct: 212 QIFSKFGTVLKIITFTKNNQFQALVQYSDGMTAQHAKLSLDGQNIYN-------ACCTLR 264
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 105
I++S T L+VK+ + +SRDYT P LP S
Sbjct: 265 ISFSKLTSLNVKYNNDKSRDYTRPDLPTGDS 295
Score = 37.7 bits (86), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 88/204 (43%), Gaps = 30/204 (14%)
Query: 9 KVIFILQVFSAFGFVHKITT-FEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ +FIL F +G V ++ F K ALVQ SD A A + L+G+ +
Sbjct: 395 QCLFIL--FGVYGDVMRVKILFNKKE--NALVQMSDGTQAQLAMSHLNGQKL-------- 442
Query: 68 MGPCTLRITYSAHTDLSVKFQSHR----SRDYTNPYLPVAPSAIDASGQLSVGLDGKKLE 123
G LR T S HT + + + H ++DY+N P+ S S +
Sbjct: 443 YGKA-LRATLSKHTTVQLPREGHEDQGLTKDYSNS--PLHRFKKPGSKNYS------NIF 493
Query: 124 PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAK 183
P S+ L + N+ +VT D L +F + G V K F + ALIQ V+ A+ +
Sbjct: 494 PPSSTL--HLSNIPPSVTEDDLRGLFLSSGAVVKAFKFFQKDRKMALIQLASVEEAIESL 551
Query: 184 EALEGHCIYDGGFCKLHISYSRHT 207
H + G L +S+S+ T
Sbjct: 552 IKFHNHDL--GENHHLRVSFSKST 573
>gi|348510807|ref|XP_003442936.1| PREDICTED: polypyrimidine tract-binding protein 1-like [Oreochromis
niloticus]
Length = 575
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/139 (49%), Positives = 84/139 (60%), Gaps = 5/139 (3%)
Query: 125 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 184
+S VL +EN+ Y VTLDVLH +FS FG V KI F KN QALIQY D TA AK
Sbjct: 194 QSPVLRVIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALIQYADAMTAQHAKM 253
Query: 185 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMV 244
+L+G IY+ C L IS+S+ T L++K NND+SRDYT P P +SQPSI Q
Sbjct: 254 SLDGQNIYN-ACCTLRISFSKLTSLNVKYNNDKSRDYTRPDLPTADSQPSIDHQAMAAAF 312
Query: 245 GA----TANQYNGAQFAPP 259
A +A+ Y GA PP
Sbjct: 313 AAPGIISASPYGGAHAFPP 331
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 58/91 (63%), Gaps = 7/91 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D TA AK +LDG++I CTLR
Sbjct: 216 QIFSKFGTVLKIITFTKNNQFQALIQYADAMTAQHAKMSLDGQNIYN-------ACCTLR 268
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 105
I++S T L+VK+ + +SRDYT P LP A S
Sbjct: 269 ISFSKLTSLNVKYNNDKSRDYTRPDLPTADS 299
>gi|413955317|gb|AFW87966.1| hypothetical protein ZEAMMB73_428640 [Zea mays]
Length = 229
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 52/74 (70%), Positives = 64/74 (86%)
Query: 16 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 75
VFSAFG+VHKI TFEK AGFQAL+Q++D TAS+AK +LDGRSIP YLLPE++ C LRI
Sbjct: 134 VFSAFGYVHKIATFEKAAGFQALIQYTDAATASAAKESLDGRSIPSYLLPEHVTSCCLRI 193
Query: 76 TYSAHTDLSVKFQS 89
++SAH DL++KFQS
Sbjct: 194 SFSAHKDLNIKFQS 207
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 62/97 (63%), Gaps = 7/97 (7%)
Query: 123 EPESNVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 181
E NVLL +IE +Q + VT+DV+HMVFSAFG V KIA F+K G QALIQY D TA
Sbjct: 108 ETAGNVLLVTIEGVQSSDVTIDVIHMVFSAFGYVHKIATFEKAAGFQALIQYTDAATASA 167
Query: 182 AKEALEGHCI------YDGGFCKLHISYSRHTDLSIK 212
AKE+L+G I C L IS+S H DL+IK
Sbjct: 168 AKESLDGRSIPSYLLPEHVTSCCLRISFSAHKDLNIK 204
>gi|413955316|gb|AFW87965.1| hypothetical protein ZEAMMB73_428640 [Zea mays]
Length = 269
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 68/84 (80%)
Query: 6 SLLKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLP 65
S + + I VFSAFG+VHKI TFEK AGFQAL+Q++D TAS+AK +LDGRSIP YLLP
Sbjct: 164 SDVTIDVIHMVFSAFGYVHKIATFEKAAGFQALIQYTDAATASAAKESLDGRSIPSYLLP 223
Query: 66 ENMGPCTLRITYSAHTDLSVKFQS 89
E++ C LRI++SAH DL++KFQS
Sbjct: 224 EHVTSCCLRISFSAHKDLNIKFQS 247
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/100 (52%), Positives = 63/100 (63%), Gaps = 7/100 (7%)
Query: 123 EPESNVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 181
E NVLL +IE +Q + VT+DV+HMVFSAFG V KIA F+K G QALIQY D TA
Sbjct: 148 ETAGNVLLVTIEGVQSSDVTIDVIHMVFSAFGYVHKIATFEKAAGFQALIQYTDAATASA 207
Query: 182 AKEALEGHCI------YDGGFCKLHISYSRHTDLSIKVNN 215
AKE+L+G I C L IS+S H DL+IK +
Sbjct: 208 AKESLDGRSIPSYLLPEHVTSCCLRISFSAHKDLNIKFQS 247
>gi|432936644|ref|XP_004082208.1| PREDICTED: polypyrimidine tract-binding protein 1-like [Oryzias
latipes]
Length = 577
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 85/142 (59%), Gaps = 11/142 (7%)
Query: 125 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 184
+S VL +EN+ Y VTLDVLH +FS FG V KI F KN QALIQY D TA AK
Sbjct: 194 QSPVLRVIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALIQYADAMTAQHAKL 253
Query: 185 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMV 244
+L+G IY+ C L IS+S+ T L++K NND+SRDYT P P +SQPS+ Q M
Sbjct: 254 SLDGQNIYN-ACCTLRISFSKLTSLNVKYNNDKSRDYTRPDLPTADSQPSLDHQ---AMA 309
Query: 245 GA-------TANQYNGAQFAPP 259
A +A+ Y GA PP
Sbjct: 310 AAAFGPGIISASPYGGAHAFPP 331
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 58/91 (63%), Gaps = 7/91 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D TA AK +LDG++I CTLR
Sbjct: 216 QIFSKFGTVLKIITFTKNNQFQALIQYADAMTAQHAKLSLDGQNIYN-------ACCTLR 268
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 105
I++S T L+VK+ + +SRDYT P LP A S
Sbjct: 269 ISFSKLTSLNVKYNNDKSRDYTRPDLPTADS 299
>gi|47198889|emb|CAF88128.1| unnamed protein product [Tetraodon nigroviridis]
Length = 217
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/111 (54%), Positives = 74/111 (66%), Gaps = 1/111 (0%)
Query: 125 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 184
+S VL +EN+ Y VTLDVLH +FS FG V KI F KN QALIQY D TA AK
Sbjct: 19 QSPVLRVIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALIQYADSMTAQHAKL 78
Query: 185 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
+L+G IY+ C L IS+S+ T L++K NND+SRDYT P P ++QPSI
Sbjct: 79 SLDGQNIYN-ACCTLRISFSKLTSLNVKYNNDKSRDYTRPDLPTADAQPSI 128
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 58/89 (65%), Gaps = 7/89 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D+ TA AK +LDG++I CTLR
Sbjct: 41 QIFSKFGTVLKIITFTKNNQFQALIQYADSMTAQHAKLSLDGQNIYNAC-------CTLR 93
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVA 103
I++S T L+VK+ + +SRDYT P LP A
Sbjct: 94 ISFSKLTSLNVKYNNDKSRDYTRPDLPTA 122
>gi|359497338|ref|XP_003635487.1| PREDICTED: LOW QUALITY PROTEIN: polypyrimidine tract-binding
protein homolog 2-like, partial [Vitis vinifera]
Length = 273
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/69 (81%), Positives = 61/69 (88%), Gaps = 1/69 (1%)
Query: 16 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSA-KNALDGRSIPRYLLPENMGPCTLR 74
VFSAFGFVHKIT FEKT FQALVQFSD+ETAS+A KNA DGRSIPRYLLPE++ PCTLR
Sbjct: 133 VFSAFGFVHKITIFEKTVRFQALVQFSDSETASTAKKNAFDGRSIPRYLLPEHLRPCTLR 192
Query: 75 ITYSAHTDL 83
IT+SAH L
Sbjct: 193 ITFSAHIYL 201
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 53/91 (58%), Gaps = 8/91 (8%)
Query: 127 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE- 184
NVLL +IE + V ++VLH+VFSAFG V KI +F+K QAL+Q+ D +TA AK+
Sbjct: 111 NVLLVTIEGADAHLVNINVLHLVFSAFGFVHKITIFEKTVRFQALVQFSDSETASTAKKN 170
Query: 185 ALEGHCIYDGGF------CKLHISYSRHTDL 209
A +G I C L I++S H L
Sbjct: 171 AFDGRSIPRYLLPEHLRPCTLRITFSAHIYL 201
>gi|169790993|ref|NP_001116126.1| polypyrimidine tract binding protein-like [Danio rerio]
Length = 564
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 96/162 (59%), Gaps = 10/162 (6%)
Query: 77 YSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDA--SGQLSVG-LDGKKLEPESNVLLASI 133
YS H +L ++ R A A++A +G L++G +D + S VL +
Sbjct: 142 YSNHKELKTDNSPNQVR------AQAALQAVNAVQTGSLTLGGVDPSGMTGPSPVLRVIV 195
Query: 134 ENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYD 193
EN+ Y VTLDVLH +FS FG V K+ F KN QAL+Q+ D TA AK AL+G IY+
Sbjct: 196 ENLFYPVTLDVLHQIFSKFGTVLKVITFTKNNQFQALLQFTDGLTAQHAKLALDGQNIYN 255
Query: 194 GGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
G C L IS+S+ T L++K NND+SRDYT P P +SQP++
Sbjct: 256 GC-CTLRISFSKLTSLNVKYNNDKSRDYTRPDLPTGDSQPAL 296
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 58/91 (63%), Gaps = 7/91 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V K+ TF K FQAL+QF+D TA AK ALDG++I G CTLR
Sbjct: 209 QIFSKFGTVLKVITFTKNNQFQALLQFTDGLTAQHAKLALDGQNIYN-------GCCTLR 261
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 105
I++S T L+VK+ + +SRDYT P LP S
Sbjct: 262 ISFSKLTSLNVKYNNDKSRDYTRPDLPTGDS 292
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 89/202 (44%), Gaps = 30/202 (14%)
Query: 11 IFILQVFSAFGFVHKITT-FEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMG 69
+FIL F +G V ++ F K AL+Q SD A A + L+G+ + Y P
Sbjct: 387 LFIL--FGVYGDVLRVKIMFNKKE--NALIQMSDGTQAQLAMSHLNGQKL--YGRP---- 436
Query: 70 PCTLRITYSAHTDLSVKFQSHR----SRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPE 125
LRIT S HT + + + H ++DY+N P+ S S + P
Sbjct: 437 ---LRITLSKHTTVQMPREGHEDQGLTKDYSNS--PLHRFKKPGSKNYS------NIFPP 485
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
S+ L + N+ +V D L ++F + G + K F + ALIQ V+ A+ +
Sbjct: 486 SSTL--HLSNIPPSVVEDDLKLLFGSSGALVKNFKFFQKDRKMALIQMSSVEEAIESLIQ 543
Query: 186 LEGHCIYDGGFCKLHISYSRHT 207
H + G L +S+S+ T
Sbjct: 544 FHNHDL--GENHHLRVSFSKST 563
>gi|61403202|gb|AAH91854.1| Ptbp1b protein [Danio rerio]
Length = 586
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 96/162 (59%), Gaps = 10/162 (6%)
Query: 77 YSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDA--SGQLSVG-LDGKKLEPESNVLLASI 133
YS H +L ++ R A A++A +G L++G +D + S VL +
Sbjct: 164 YSNHKELKTDNSPNQVR------AQAALQAVNAVQTGSLTLGGVDPSGMTGPSPVLRVIV 217
Query: 134 ENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYD 193
EN+ Y VTLDVLH +FS FG V K+ F KN QAL+Q+ D TA AK AL+G IY+
Sbjct: 218 ENLFYPVTLDVLHQIFSKFGTVLKVITFTKNNQFQALLQFTDGLTAQHAKLALDGQNIYN 277
Query: 194 GGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
G C L IS+S+ T L++K NND+SRDYT P P +SQP++
Sbjct: 278 -GCCTLRISFSKLTSLNVKYNNDKSRDYTRPDLPTGDSQPAL 318
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 58/91 (63%), Gaps = 7/91 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V K+ TF K FQAL+QF+D TA AK ALDG++I G CTLR
Sbjct: 231 QIFSKFGTVLKVITFTKNNQFQALLQFTDGLTAQHAKLALDGQNIYN-------GCCTLR 283
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 105
I++S T L+VK+ + +SRDYT P LP S
Sbjct: 284 ISFSKLTSLNVKYNNDKSRDYTRPDLPTGDS 314
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 89/202 (44%), Gaps = 30/202 (14%)
Query: 11 IFILQVFSAFGFVHKITT-FEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMG 69
+FIL F +G V ++ F K AL+Q SD A A + L+G+ + Y P
Sbjct: 409 LFIL--FGVYGDVLRVKIMFNKKE--NALIQMSDGTQAQLAMSHLNGQKL--YGRP---- 458
Query: 70 PCTLRITYSAHTDLSVKFQSHR----SRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPE 125
LRIT S HT + + + H ++DY+N P+ S S + P
Sbjct: 459 ---LRITLSKHTTVQMPREGHEDQGLTKDYSNS--PLHRFKKPGSKNYS------NIFPP 507
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
S+ L + N+ +V D L ++F + G + K F + ALIQ V+ A+ +
Sbjct: 508 SSTL--HLSNIPPSVVEDDLKLLFGSSGALVKNFKFFQKDRKMALIQMSSVEEAIESLIQ 565
Query: 186 LEGHCIYDGGFCKLHISYSRHT 207
H + G L +S+S+ T
Sbjct: 566 FHNHDL--GENHHLRVSFSKST 585
>gi|410897873|ref|XP_003962423.1| PREDICTED: polypyrimidine tract-binding protein 1-like isoform 2
[Takifugu rubripes]
Length = 577
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 66/139 (47%), Positives = 84/139 (60%), Gaps = 5/139 (3%)
Query: 125 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 184
+S VL +EN+ Y VTL+VLH +FS FG V KI F KN QALIQ+ D TA AK
Sbjct: 195 QSPVLRVIVENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALIQHVDSMTAQHAKL 254
Query: 185 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMV 244
+L+G IY+ C L IS+S+ T L++K NND+SRDYT P P +SQPS+ Q
Sbjct: 255 SLDGQNIYN-ACCTLRISFSKLTSLNVKYNNDKSRDYTRPDLPTADSQPSLDPQTMAAAF 313
Query: 245 GA----TANQYNGAQFAPP 259
A +A+ Y GA PP
Sbjct: 314 AAPGIISASPYGGAHAFPP 332
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 57/91 (62%), Gaps = 7/91 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q D+ TA AK +LDG++I CTLR
Sbjct: 217 QIFSKFGTVLKIITFTKNNQFQALIQHVDSMTAQHAKLSLDGQNIYN-------ACCTLR 269
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 105
I++S T L+VK+ + +SRDYT P LP A S
Sbjct: 270 ISFSKLTSLNVKYNNDKSRDYTRPDLPTADS 300
Score = 38.1 bits (87), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 85/202 (42%), Gaps = 30/202 (14%)
Query: 11 IFILQVFSAFGFVHKITT-FEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMG 69
+FIL F +G V ++ F K ALVQ SD A A + L+G + +
Sbjct: 400 LFIL--FGVYGDVMRVKILFNKKE--NALVQMSDGTQAQLAMSHLNG---------QRLH 446
Query: 70 PCTLRITYSAHTDLSVKFQSHR----SRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPE 125
+R+T+S HT + + + H ++DY+N P+ S S + P
Sbjct: 447 GREMRVTFSKHTTVQLPREGHEDQGLTKDYSNS--PLHRFKKPGSKNYS------NIFPP 498
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
S L + N+ AV D L +F++ G K F + ALIQ V+ A+
Sbjct: 499 SATL--HLSNIPPAVVEDDLKRLFASSGATVKAFKFFQKDHKMALIQMGSVEEAIDCLIK 556
Query: 186 LEGHCIYDGGFCKLHISYSRHT 207
H + G L +S+S+ T
Sbjct: 557 FHNHDL--GENHHLRVSFSKST 576
>gi|410897871|ref|XP_003962422.1| PREDICTED: polypyrimidine tract-binding protein 1-like isoform 1
[Takifugu rubripes]
Length = 575
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/139 (47%), Positives = 84/139 (60%), Gaps = 5/139 (3%)
Query: 125 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 184
+S VL +EN+ Y VTL+VLH +FS FG V KI F KN QALIQ+ D TA AK
Sbjct: 193 QSPVLRVIVENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALIQHVDSMTAQHAKL 252
Query: 185 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMV 244
+L+G IY+ C L IS+S+ T L++K NND+SRDYT P P +SQPS+ Q
Sbjct: 253 SLDGQNIYN-ACCTLRISFSKLTSLNVKYNNDKSRDYTRPDLPTADSQPSLDPQTMAAAF 311
Query: 245 GA----TANQYNGAQFAPP 259
A +A+ Y GA PP
Sbjct: 312 AAPGIISASPYGGAHAFPP 330
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 57/91 (62%), Gaps = 7/91 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q D+ TA AK +LDG++I CTLR
Sbjct: 215 QIFSKFGTVLKIITFTKNNQFQALIQHVDSMTAQHAKLSLDGQNIYN-------ACCTLR 267
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 105
I++S T L+VK+ + +SRDYT P LP A S
Sbjct: 268 ISFSKLTSLNVKYNNDKSRDYTRPDLPTADS 298
Score = 37.7 bits (86), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 85/202 (42%), Gaps = 30/202 (14%)
Query: 11 IFILQVFSAFGFVHKITT-FEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMG 69
+FIL F +G V ++ F K ALVQ SD A A + L+G + +
Sbjct: 398 LFIL--FGVYGDVMRVKILFNKKE--NALVQMSDGTQAQLAMSHLNG---------QRLH 444
Query: 70 PCTLRITYSAHTDLSVKFQSHR----SRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPE 125
+R+T+S HT + + + H ++DY+N P+ S S + P
Sbjct: 445 GREMRVTFSKHTTVQLPREGHEDQGLTKDYSNS--PLHRFKKPGSKNYS------NIFPP 496
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
S L + N+ AV D L +F++ G K F + ALIQ V+ A+
Sbjct: 497 SATL--HLSNIPPAVVEDDLKRLFASSGATVKAFKFFQKDHKMALIQMGSVEEAIDCLIK 554
Query: 186 LEGHCIYDGGFCKLHISYSRHT 207
H + G L +S+S+ T
Sbjct: 555 FHNHDL--GENHHLRVSFSKST 574
>gi|145324168|ref|NP_001077673.1| polypyrimidine tract-binding protein 3 [Arabidopsis thaliana]
gi|332193842|gb|AEE31963.1| polypyrimidine tract-binding protein 3 [Arabidopsis thaliana]
Length = 430
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/267 (33%), Positives = 126/267 (47%), Gaps = 54/267 (20%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCT 72
+LQ+F FG + K+ A QAL+Q D +A SA N+ P T
Sbjct: 22 LLQLFQPFGVITKLVMLR--AKNQALLQMQDVSSAVSALQFF-----------TNVQP-T 67
Query: 73 LRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLAS 132
+R Y V+F SH+ + I+ + + G++ EP + +LL +
Sbjct: 68 IRNVY-------VQFSSHQE-----------LTTIEQN------IHGREDEP-NRILLVT 102
Query: 133 IENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 192
I +M Y +T+DVLH VFS +G V+K+ F K+ G QALIQY Q A A+ AL+G IY
Sbjct: 103 IHHMLYPITVDVLHQVFSPYGFVEKLVTFQKSAGFQALIQYQVQQCAASARTALQGRNIY 162
Query: 193 DGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQYN 252
DG C+L I +S +L + NNDRSRDYT P+ P G+ P G T Y
Sbjct: 163 DGC-CQLDIQFSNLEELQVNYNNDRSRDYTNPNLPAEQK-----GRSSHPCYGDTGVAY- 215
Query: 253 GAQFAPPPPEQPMMHQPTAAGWGAVPP 279
P+ AA G +PP
Sbjct: 216 --------PQMANTSAIAAAFGGGLPP 234
>gi|426386370|ref|XP_004059658.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 3
[Gorilla gorilla gorilla]
Length = 552
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/140 (47%), Positives = 84/140 (60%), Gaps = 5/140 (3%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 174 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 233
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 238
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 234 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL--- 289
Query: 239 QPVPMVGATANQYNGAQFAP 258
M A A+ Y GA F P
Sbjct: 290 -DQTMAAAFASPYAGAGFPP 308
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 56/91 (61%), Gaps = 7/91 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 202 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYNAC-------CTLR 254
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 105
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 255 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 285
>gi|397524|emb|CAA52653.1| polypyrimidine tract binding protein [Rattus norvegicus]
Length = 556
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/166 (43%), Positives = 94/166 (56%), Gaps = 15/166 (9%)
Query: 97 NPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQ 156
N L + +A+DA G + +S VL +EN+ Y VTLDVLH +FS FG V
Sbjct: 160 NLALRASAAAVDA---------GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVL 210
Query: 157 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 216
KI F KN QAL+QY D +A AK +L+G IY+ C L I +S+ T L++K NND
Sbjct: 211 KIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNND 269
Query: 217 RSRDYTLPSTPMVNSQPSILGQQPVPMVGA----TANQYNGAQFAP 258
+SRDYT P P +SQPS L Q GA +A+ Y GA F P
Sbjct: 270 KSRDYTRPDLPSGDSQPS-LDQTMAAAFGAPGIMSASPYAGAGFPP 314
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 56/91 (61%), Gaps = 7/91 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 201 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 253
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 105
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 254 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 284
>gi|395831594|ref|XP_003788880.1| PREDICTED: polypyrimidine tract-binding protein 1 [Otolemur
garnettii]
Length = 582
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/140 (47%), Positives = 84/140 (60%), Gaps = 5/140 (3%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 206 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 265
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 238
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 266 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL--- 321
Query: 239 QPVPMVGATANQYNGAQFAP 258
M A A+ Y GA F P
Sbjct: 322 -DQTMAAAFASPYAGAGFPP 340
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 111/251 (44%), Gaps = 71/251 (28%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 234 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 286
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS-------------------------AIDA 109
I +S T L+VK+ + +SRDYT P LP S AI
Sbjct: 287 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFASPYAGAGFPPTFAIPQ 346
Query: 110 SGQLSV----------------------------GLDGKKLEPESNVLLASIENMQYAVT 141
+ LSV GL G ++VLL S N + VT
Sbjct: 347 AAGLSVPNVHGALAPLAIPSAAAAAAAAGRIAIPGLAGAG----NSVLLVSNLNPE-RVT 401
Query: 142 LDVLHMVFSAFGPVQKIA-MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLH 200
L ++F +G VQ++ +F+K AL+Q D A +A L GH ++ +
Sbjct: 402 PQSLFILFGVYGDVQRVKILFNKKE--NALVQMADANQAQLAMSHLSGHKLHGK---PIR 456
Query: 201 ISYSRHTDLSI 211
I+ S+H ++ +
Sbjct: 457 ITLSKHQNVQL 467
>gi|426229473|ref|XP_004008815.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 3 [Ovis
aries]
Length = 550
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/140 (47%), Positives = 84/140 (60%), Gaps = 5/140 (3%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 174 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 233
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 238
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 234 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL--- 289
Query: 239 QPVPMVGATANQYNGAQFAP 258
M A A+ Y GA F P
Sbjct: 290 -DQTMAAAFASPYAGAGFPP 308
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 110/251 (43%), Gaps = 71/251 (28%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 202 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 254
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS-------------------------AIDA 109
I +S T L+VK+ + +SRDYT P LP S AI
Sbjct: 255 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFASPYAGAGFPPTFAIPQ 314
Query: 110 SGQLSV----------------------------GLDGKKLEPESNVLLASIENMQYAVT 141
+ LSV GL G ++VLL S N + VT
Sbjct: 315 AAGLSVPNVHGALAPLAIPSAAAAAAAAGRIAIPGLAG----AGNSVLLVSNLNPER-VT 369
Query: 142 LDVLHMVFSAFGPVQKI-AMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLH 200
L ++F +G VQ++ +F+K AL+Q D A +A L GH ++ +
Sbjct: 370 PQSLFILFGVYGDVQRVKVLFNKKE--NALVQMADGSQAQLAMSHLNGHKLHGK---PVR 424
Query: 201 ISYSRHTDLSI 211
I+ S+H + +
Sbjct: 425 ITLSKHQSVQL 435
>gi|402903490|ref|XP_003914598.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 3 [Papio
anubis]
Length = 549
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/140 (47%), Positives = 84/140 (60%), Gaps = 5/140 (3%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 173 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 232
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 238
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 233 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL--- 288
Query: 239 QPVPMVGATANQYNGAQFAP 258
M A A+ Y GA F P
Sbjct: 289 -DQTMAAAFASPYAGAGFPP 307
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 111/251 (44%), Gaps = 71/251 (28%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 201 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 253
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS-------------------------AIDA 109
I +S T L+VK+ + +SRDYT P LP S AI
Sbjct: 254 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFASPYAGAGFPPTFAIPQ 313
Query: 110 SGQLSV----------------------------GLDGKKLEPESNVLLASIENMQYAVT 141
+ LSV GL G ++VLL S N + VT
Sbjct: 314 AAGLSVPNVHGALAPLAIPSAAAAAAAAGRIAIPGLAG----AGNSVLLVSNLNPER-VT 368
Query: 142 LDVLHMVFSAFGPVQKIA-MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLH 200
L ++F +G VQ++ +F+K AL+Q D A +A L GH ++ +
Sbjct: 369 PQSLFILFGVYGDVQRVKILFNKKE--NALVQMADGNQAQLAMSHLNGHKLHGK---PIR 423
Query: 201 ISYSRHTDLSI 211
I+ S+H ++ +
Sbjct: 424 ITLSKHQNVQL 434
>gi|119581561|gb|EAW61157.1| polypyrimidine tract binding protein 1, isoform CRA_f [Homo
sapiens]
Length = 520
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/140 (47%), Positives = 84/140 (60%), Gaps = 5/140 (3%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 144 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 203
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 238
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 204 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL--- 259
Query: 239 QPVPMVGATANQYNGAQFAP 258
M A A+ Y GA F P
Sbjct: 260 -DQTMAAAFASPYAGAGFPP 278
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 111/251 (44%), Gaps = 71/251 (28%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 172 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 224
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS-------------------------AIDA 109
I +S T L+VK+ + +SRDYT P LP S AI
Sbjct: 225 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFASPYAGAGFPPTFAIPQ 284
Query: 110 SGQLSV----------------------------GLDGKKLEPESNVLLASIENMQYAVT 141
+ LSV GL G ++VLL S N + VT
Sbjct: 285 AAGLSVPNVHGALAPLAIPSAAAAAAAAGRIAIPGLAG----AGNSVLLVSNLNPE-RVT 339
Query: 142 LDVLHMVFSAFGPVQKIA-MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLH 200
L ++F +G VQ++ +F+K AL+Q D A +A L GH ++ +
Sbjct: 340 PQSLFILFGVYGDVQRVKILFNKKE--NALVQMADGNQAQLAMSHLNGHKLHGK---PIR 394
Query: 201 ISYSRHTDLSI 211
I+ S+H ++ +
Sbjct: 395 ITLSKHQNVQL 405
>gi|14165464|ref|NP_114367.1| polypyrimidine tract-binding protein 1 isoform b [Homo sapiens]
gi|332850820|ref|XP_003316018.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 3 [Pan
troglodytes]
gi|35770|emb|CAA46443.1| polypirimidine tract binding protein [Homo sapiens]
gi|119581556|gb|EAW61152.1| polypyrimidine tract binding protein 1, isoform CRA_a [Homo
sapiens]
gi|410218532|gb|JAA06485.1| polypyrimidine tract binding protein 1 [Pan troglodytes]
Length = 550
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/140 (47%), Positives = 84/140 (60%), Gaps = 5/140 (3%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 174 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 233
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 238
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 234 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL--- 289
Query: 239 QPVPMVGATANQYNGAQFAP 258
M A A+ Y GA F P
Sbjct: 290 -DQTMAAAFASPYAGAGFPP 308
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 111/251 (44%), Gaps = 71/251 (28%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 202 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 254
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS-------------------------AIDA 109
I +S T L+VK+ + +SRDYT P LP S AI
Sbjct: 255 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFASPYAGAGFPPTFAIPQ 314
Query: 110 SGQLSV----------------------------GLDGKKLEPESNVLLASIENMQYAVT 141
+ LSV GL G ++VLL S N + VT
Sbjct: 315 AAGLSVPNVHGALAPLAIPSAAAAAAAAGRIAIPGLAG----AGNSVLLVSNLNPER-VT 369
Query: 142 LDVLHMVFSAFGPVQKIA-MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLH 200
L ++F +G VQ++ +F+K AL+Q D A +A L GH ++ +
Sbjct: 370 PQSLFILFGVYGDVQRVKILFNKKE--NALVQMADGNQAQLAMSHLNGHKLHGK---PIR 424
Query: 201 ISYSRHTDLSI 211
I+ S+H ++ +
Sbjct: 425 ITLSKHQNVQL 435
>gi|73987397|ref|XP_868637.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 6 [Canis
lupus familiaris]
Length = 550
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/140 (47%), Positives = 84/140 (60%), Gaps = 5/140 (3%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 174 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 233
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 238
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 234 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL--- 289
Query: 239 QPVPMVGATANQYNGAQFAP 258
M A A+ Y GA F P
Sbjct: 290 -DQTMAAAFASPYAGAGFPP 308
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 111/251 (44%), Gaps = 71/251 (28%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 202 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 254
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS-------------------------AIDA 109
I +S T L+VK+ + +SRDYT P LP S AI
Sbjct: 255 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFASPYAGAGFPPTFAIPQ 314
Query: 110 SGQLSV----------------------------GLDGKKLEPESNVLLASIENMQYAVT 141
+ LSV GL G ++VLL S N + VT
Sbjct: 315 AAGLSVPNVHGALAPLAIPSAAAAAAAAGRIAIPGLAG----AGNSVLLVSNLNPER-VT 369
Query: 142 LDVLHMVFSAFGPVQKIA-MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLH 200
L ++F +G VQ++ +F+K AL+Q D A +A L GH ++ +
Sbjct: 370 PQSLFILFGVYGDVQRVKILFNKKE--NALVQMADGSQAQLAMSHLNGHKLHGK---PVR 424
Query: 201 ISYSRHTDLSI 211
I+ S+H ++ +
Sbjct: 425 ITLSKHQNVQL 435
>gi|403308155|ref|XP_003944537.1| PREDICTED: uncharacterized protein LOC101029560 [Saimiri
boliviensis boliviensis]
Length = 1167
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/138 (48%), Positives = 84/138 (60%), Gaps = 6/138 (4%)
Query: 125 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 184
+S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +A AK
Sbjct: 415 QSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKL 474
Query: 185 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMV 244
+L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 475 SLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQTMAAAF 532
Query: 245 GA----TANQYNGAQFAP 258
GA +A+ Y GA F P
Sbjct: 533 GAPGIISASPYAGAGFPP 550
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 56/91 (61%), Gaps = 7/91 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 437 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYNAC-------CTLR 489
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 105
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 490 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 520
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 90/212 (42%), Gaps = 27/212 (12%)
Query: 2 CLTLSLLKVI-----FILQVFSAFGFVHKITT-FEKTAGFQALVQFSDTETASSAKNALD 55
CL L LK + FIL F +G V ++ F K ALVQ +D A A + L+
Sbjct: 976 CLALLSLKRVTPQSLFIL--FGVYGDVQRVKILFNKKE--NALVQMADGNQAQLAMSHLN 1031
Query: 56 GRSIPRYLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSV 115
G + + P +RIT S H ++ + + + T Y G +
Sbjct: 1032 GHKL--HGKP-------IRITLSKHQNVQLPREGQEDQGLTKDYGNSPLHRFKKPGSKNF 1082
Query: 116 GLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPD 175
+ + P S L + N+ +V+ + L ++FS+ G V K F + ALIQ
Sbjct: 1083 ----QNIFPPSATL--HLSNIPPSVSEEDLKVLFSSNGGVVKGFKFFQKDRKMALIQMGS 1136
Query: 176 VQTAVVAKEALEGHCIYDGGFCKLHISYSRHT 207
V+ AV A L H + G L +S+S+ T
Sbjct: 1137 VEEAVQALIDLHNHDL--GESHHLRVSFSKST 1166
>gi|148699703|gb|EDL31650.1| mCG13402, isoform CRA_g [Mus musculus]
Length = 366
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 173 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 232
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 238
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 233 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 290
Query: 239 QPVPMVGA----TANQYNGAQFAP 258
GA +A+ Y GA F P
Sbjct: 291 TMAAAFGAPGIMSASPYAGAGFPP 314
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 56/91 (61%), Gaps = 7/91 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 201 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 253
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 105
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 254 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 284
>gi|28949889|emb|CAD70621.1| polypyrimidine track-binding protein homologue [Cicer arietinum]
Length = 442
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 109/222 (49%), Gaps = 53/222 (23%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSA----KNA---LDGRSIPRYLLP 65
+LQ+F FG + K+ QAL+Q D +A SA NA + GR++
Sbjct: 22 LLQLFQTFGVITKLVMLRTKN--QALLQMEDIPSAISALQFYANAQPSIRGRNV------ 73
Query: 66 ENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPE 125
+ +S+H +L+ QS G+ EP
Sbjct: 74 --------YVQFSSHKELTTMDQSQ----------------------------GRDDEP- 96
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ +LL ++ MQY +T+DVL VFS G V+KI F K+ G QALIQY Q+AV A+ +
Sbjct: 97 NRILLVTVHQMQYPITVDVLQQVFSPHGYVEKIVTFQKSAGFQALIQYESRQSAVTARSS 156
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
L+G IYD G C+L I +S +L + NNDRSRDYT P+ P
Sbjct: 157 LQGRNIYD-GCCQLDIQFSNLDELQVNYNNDRSRDYTNPNLP 197
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 115/237 (48%), Gaps = 50/237 (21%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + QVFS G+V KI TF+K+AGFQAL+Q+ ++A +A+++L GR+I
Sbjct: 111 ITVDVLQQVFSPHGYVEKIVTFQKSAGFQALIQYESRQSAVTARSSLQGRNIYD------ 164
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVA------------------------ 103
G C L I +S +L V + + RSRDYTNP LP
Sbjct: 165 -GCCQLDIQFSNLDELQVNYNNDRSRDYTNPNLPTEQKGRPSHSGYGDTGMHGVQGSGAR 223
Query: 104 ---------PSAIDAS--GQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAF 152
+AI+A+ G L G+ G VL+A++ + + D L +FS +
Sbjct: 224 PGGFSQMTNAAAIEAAFGGDLPPGITGTN--DRCTVLVANLNPDR--IDEDKLFNLFSIY 279
Query: 153 GPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDL 209
G + +I + +N AL+Q D A +A L+G ++ +L +++S+H ++
Sbjct: 280 GNIVRIKLL-RNKPDHALVQMGDGFQAELAVYFLKGAMLFGK---RLEVNFSKHPNI 332
>gi|340375863|ref|XP_003386453.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Amphimedon
queenslandica]
Length = 476
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 110/215 (51%), Gaps = 22/215 (10%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCT 72
+ + S +G V K+ + QA V+ ++ TA + +A R P + T
Sbjct: 37 VFMLMSTYGAVSKVLLLRQKN--QAFVELAELSTACALVDAFSTR-------PAQIKDRT 87
Query: 73 LRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLAS 132
+ I +S H +L + P+A + +VG+ G +++L
Sbjct: 88 VYIQFSKHQELK------------SGSTPIANPGGVPTFTSTVGVVGTSQGQPNSILRVI 135
Query: 133 IENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 192
IENM Y +T+DVLH +F+ +G V K+ F KN ALIQYP+ A AK AL+G IY
Sbjct: 136 IENMIYPITIDVLHQIFAKYGDVLKVVTFMKNTQFHALIQYPNEIIATNAKTALDGQNIY 195
Query: 193 DGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
+G C LHI YS+ ++L++K NN+++RD+T P P
Sbjct: 196 NGC-CTLHIDYSKLSNLTVKFNNEKTRDFTRPDLP 229
>gi|158454983|gb|AAI03384.1| PTBP1 protein [Bos taurus]
Length = 446
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 174 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 233
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 238
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 234 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 291
Query: 239 QPVPMVGA----TANQYNGAQFAP 258
GA +A+ Y GA F P
Sbjct: 292 TMAAAFGAPGIMSASPYAGAGFPP 315
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 56/91 (61%), Gaps = 7/91 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 202 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYNAC-------CTLR 254
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 105
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 255 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 285
>gi|355714176|gb|AES04919.1| polypyrimidine tract binding protein 1 [Mustela putorius furo]
Length = 353
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 174 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 233
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 238
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 234 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 291
Query: 239 QPVPMVGA----TANQYNGAQFAP 258
GA +A+ Y GA F P
Sbjct: 292 TMAAAFGAPGIMSASPYAGAGFPP 315
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 56/91 (61%), Gaps = 7/91 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 202 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYNAC-------CTLR 254
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 105
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 255 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 285
>gi|213513374|ref|NP_001133504.1| polypyrimidine tract-binding protein 2 [Salmo salar]
gi|209154262|gb|ACI33363.1| Polypyrimidine tract-binding protein 2 [Salmo salar]
Length = 520
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/180 (40%), Positives = 94/180 (52%), Gaps = 6/180 (3%)
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIE 134
I YS H +L + R++ + A SA+ G + G D S VL I+
Sbjct: 127 IQYSNHKELKTDAGNQRAQ-----AVLQAVSAVQGGGTPTSGSDLALTAASSPVLRIIID 181
Query: 135 NMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDG 194
NM Y VTLDVL +FS FG V KI F KN QAL+Q+ D TA AK AL+G IY+
Sbjct: 182 NMFYPVTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFNDPSTAQQAKIALDGQNIYN- 240
Query: 195 GFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQYNGA 254
C L I YS+ +L++K NND+SRDYT P P + QP++ G +N GA
Sbjct: 241 SCCTLRIDYSKLVNLNVKYNNDKSRDYTRPELPAGDGQPAMDPNMAAAFQGKDSNSLLGA 300
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 108/237 (45%), Gaps = 45/237 (18%)
Query: 3 LTLSLLKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRY 62
+TL +L+ Q+FS FG V KI TF K FQAL+QF+D TA AK ALDG++I
Sbjct: 187 VTLDVLQ-----QIFSKFGTVMKIITFTKNNQFQALLQFNDPSTAQQAKIALDGQNIYN- 240
Query: 63 LLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKK- 121
CTLRI YS +L+VK+ + +SRDYT P LP ++ GK
Sbjct: 241 ------SCCTLRIDYSKLVNLNVKYNNDKSRDYTRPELPAGDGQPAMDPNMAAAFQGKDS 294
Query: 122 ------LEP---------------------ESNVLLASIENMQYAVTLDVLHMVFSAFGP 154
L P S VLLAS N + VT L +F +G
Sbjct: 295 NSLLGALSPLNAAAAAAAAAGRVALSGHSGSSGVLLASNLN-EEMVTPQSLFTLFGVYGD 353
Query: 155 VQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 211
Q++ + N ALIQ D A +A L G +Y + ++ S+HT + +
Sbjct: 354 TQRVKIL-YNKKDSALIQMADASQAQLAMSHLNGQKMYGK---VIRVALSKHTSVQL 406
>gi|354480918|ref|XP_003502650.1| PREDICTED: polypyrimidine tract-binding protein 1-like [Cricetulus
griseus]
Length = 591
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 209 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 268
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 238
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 269 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 326
Query: 239 QPVPMVGA----TANQYNGAQFAP 258
GA +A+ Y GA F P
Sbjct: 327 TMAAAFGAPGIMSASPYAGAGFPP 350
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 56/91 (61%), Gaps = 7/91 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 237 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYNAC-------CTLR 289
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 105
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 290 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 320
>gi|357133525|ref|XP_003568375.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
[Brachypodium distachyon]
Length = 444
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 109/222 (49%), Gaps = 49/222 (22%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKN-------ALDGRSIPRYLLP 65
+LQ+ FG V KI A QAL+Q D ++ SA ++ GR+I
Sbjct: 22 LLQLLQPFGAVSKIVMLR--AKNQALLQMQDIHSSVSALQYYTTVQPSVRGRNI------ 73
Query: 66 ENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPE 125
+ +S+H +L+ SH G + +
Sbjct: 74 --------YMQFSSHQELTTDQSSH-------------------------GRNSDQDSEP 100
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ +LLA+I +M Y +T++VLH VF A+G V+KI F+K+ G QALIQY Q AV A A
Sbjct: 101 NRILLATIHHMIYPITVEVLHQVFKAYGYVEKIVTFNKSAGFQALIQYQSRQEAVEAFGA 160
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
L G IYDG C+L I YS ++L + NNDRSRD+T PS P
Sbjct: 161 LHGRNIYDGC-CQLDIQYSNLSELQVHYNNDRSRDFTNPSLP 201
>gi|116517301|ref|NP_001070831.1| polypyrimidine tract-binding protein 1 isoform 1 [Mus musculus]
gi|13938631|gb|AAH07472.1| Polypyrimidine tract binding protein 1 [Mus musculus]
gi|26328983|dbj|BAC28230.1| unnamed protein product [Mus musculus]
gi|26334239|dbj|BAC30837.1| unnamed protein product [Mus musculus]
gi|26335929|dbj|BAC31665.1| unnamed protein product [Mus musculus]
gi|26341260|dbj|BAC34292.1| unnamed protein product [Mus musculus]
gi|26353506|dbj|BAC40383.1| unnamed protein product [Mus musculus]
gi|74191391|dbj|BAE30277.1| unnamed protein product [Mus musculus]
gi|148699699|gb|EDL31646.1| mCG13402, isoform CRA_c [Mus musculus]
Length = 555
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 173 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 232
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 238
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 233 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 290
Query: 239 QPVPMVGA----TANQYNGAQFAP 258
GA +A+ Y GA F P
Sbjct: 291 TMAAAFGAPGIMSASPYAGAGFPP 314
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 56/91 (61%), Gaps = 7/91 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 201 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 253
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 105
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 254 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 284
>gi|426386366|ref|XP_004059656.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 1
[Gorilla gorilla gorilla]
Length = 559
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 174 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 233
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 238
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 234 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 291
Query: 239 QPVPMVGA----TANQYNGAQFAP 258
GA +A+ Y GA F P
Sbjct: 292 TMAAAFGAPGIISASPYAGAGFPP 315
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 56/91 (61%), Gaps = 7/91 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 202 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYNAC-------CTLR 254
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 105
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 255 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 285
>gi|42490826|gb|AAH66210.1| Polypyrimidine tract binding protein 1 [Mus musculus]
Length = 555
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 173 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 232
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 238
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 233 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 290
Query: 239 QPVPMVGA----TANQYNGAQFAP 258
GA +A+ Y GA F P
Sbjct: 291 TMAAAFGAPGIMSASPYAGAGFPP 314
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 56/91 (61%), Gaps = 7/91 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 201 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 253
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 105
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 254 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 284
>gi|74194434|dbj|BAE37269.1| unnamed protein product [Mus musculus]
Length = 520
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 173 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 232
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 238
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 233 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 290
Query: 239 QPVPMVGA----TANQYNGAQFAP 258
GA +A+ Y GA F P
Sbjct: 291 TMAAAFGAPGIMSASPYAGAGFPP 314
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 56/91 (61%), Gaps = 7/91 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 201 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 253
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 105
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 254 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 284
>gi|28849152|dbj|BAC65159.1| polypirimidine tract binding protein [Mus musculus]
Length = 554
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 173 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 232
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 238
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 233 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 290
Query: 239 QPVPMVGA----TANQYNGAQFAP 258
GA +A+ Y GA F P
Sbjct: 291 TMAAAFGAPGIMSASPYAGAGFPP 314
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 56/91 (61%), Gaps = 7/91 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 201 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 253
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 105
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 254 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 284
Score = 38.1 bits (87), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 82/198 (41%), Gaps = 23/198 (11%)
Query: 11 IFILQVFSAFGFVHKITT-FEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMG 69
+FIL F +G V ++ F K ALVQ +D A A + L+G +
Sbjct: 378 LFIL--FGVYGDVQRVKILFNKKE--NALVQMADGSQAQLAMSHLNGHKLHGK------- 426
Query: 70 PCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVL 129
++RIT S H + + + + T Y G + + + P S L
Sbjct: 427 --SVRITLSKHQSVQLPREGQEDQGLTKDYGSSPLHRFKKPGSKNF----QNIFPPSATL 480
Query: 130 LASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGH 189
+ N+ +V+ D L +FS+ G V K F + ALIQ V+ AV A L H
Sbjct: 481 --HLSNIPPSVSEDDLKSLFSSNGGVAKGFKFFQKDRKMALIQMGSVEEAVQALIELHNH 538
Query: 190 CIYDGGFCKLHISYSRHT 207
D G L +S+S+ T
Sbjct: 539 ---DLGEHHLRVSFSKST 553
>gi|20809354|gb|AAH28848.1| Polypyrimidine tract binding protein 1 [Mus musculus]
Length = 555
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 173 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 232
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 238
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 233 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 290
Query: 239 QPVPMVGA----TANQYNGAQFAP 258
GA +A+ Y GA F P
Sbjct: 291 TMAAAFGAPGIMSASPYAGAGFPP 314
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 56/91 (61%), Gaps = 7/91 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 201 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 253
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 105
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 254 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 284
>gi|402743987|ref|NP_001257986.1| polypyrimidine tract-binding protein 1 isoform a [Rattus
norvegicus]
gi|38197632|gb|AAH61858.1| Ptbp1 protein [Rattus norvegicus]
gi|149034647|gb|EDL89384.1| polypyrimidine tract binding protein 1, isoform CRA_a [Rattus
norvegicus]
Length = 556
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 173 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 232
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 238
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 233 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 290
Query: 239 QPVPMVGA----TANQYNGAQFAP 258
GA +A+ Y GA F P
Sbjct: 291 TMAAAFGAPGIMSASPYAGAGFPP 314
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 56/91 (61%), Gaps = 7/91 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 201 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 253
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 105
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 254 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 284
>gi|301776290|ref|XP_002923578.1| PREDICTED: polypyrimidine tract-binding protein 1-like [Ailuropoda
melanoleuca]
Length = 526
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 174 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 233
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 238
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 234 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 291
Query: 239 QPVPMVGA----TANQYNGAQFAP 258
GA +A+ Y GA F P
Sbjct: 292 TMAAAFGAPGIMSASPYAGAGFPP 315
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 56/91 (61%), Gaps = 7/91 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 202 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYNAC-------CTLR 254
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 105
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 255 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 285
>gi|74152131|dbj|BAE32096.1| unnamed protein product [Mus musculus]
Length = 555
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 173 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 232
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 238
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 233 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 290
Query: 239 QPVPMVGA----TANQYNGAQFAP 258
GA +A+ Y GA F P
Sbjct: 291 TMAAAFGAPGIMSASPYAGAGFPP 314
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 56/91 (61%), Gaps = 7/91 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 201 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 253
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 105
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 254 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 284
>gi|351714013|gb|EHB16932.1| Polypyrimidine tract-binding protein 1, partial [Heterocephalus
glaber]
Length = 548
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 163 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNSQFQALLQYADPVS 222
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 238
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 223 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 280
Query: 239 QPVPMVGA----TANQYNGAQFAP 258
GA +A+ Y GA F P
Sbjct: 281 TMAAAFGAPGIISASPYAGAGFPP 304
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 57/91 (62%), Gaps = 7/91 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K + FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 191 QIFSKFGTVLKIITFTKNSQFQALLQYADPVSAQHAKLSLDGQNIYNAC-------CTLR 243
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 105
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 244 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 274
>gi|344243367|gb|EGV99470.1| Polypyrimidine tract-binding protein 1 [Cricetulus griseus]
Length = 528
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 146 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 205
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 238
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 206 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 263
Query: 239 QPVPMVGA----TANQYNGAQFAP 258
GA +A+ Y GA F P
Sbjct: 264 TMAAAFGAPGIMSASPYAGAGFPP 287
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 56/91 (61%), Gaps = 7/91 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 174 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 226
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 105
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 227 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 257
>gi|281341342|gb|EFB16926.1| hypothetical protein PANDA_012716 [Ailuropoda melanoleuca]
Length = 540
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 162 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 221
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 238
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 222 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 279
Query: 239 QPVPMVGA----TANQYNGAQFAP 258
GA +A+ Y GA F P
Sbjct: 280 TMAAAFGAPGIMSASPYAGAGFPP 303
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 56/91 (61%), Gaps = 7/91 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 190 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 242
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 105
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 243 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 273
>gi|444509522|gb|ELV09317.1| Polypyrimidine tract-binding protein 1, partial [Tupaia chinensis]
Length = 522
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/138 (48%), Positives = 84/138 (60%), Gaps = 6/138 (4%)
Query: 125 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 184
+S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +A AK
Sbjct: 155 QSPVLRVIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKL 214
Query: 185 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMV 244
+L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 215 SLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQTMAAAF 272
Query: 245 GA----TANQYNGAQFAP 258
GA +A+ Y GA F P
Sbjct: 273 GAPGIISASPYAGAGFPP 290
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 56/91 (61%), Gaps = 7/91 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 177 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYNAC-------CTLR 229
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 105
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 230 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 260
>gi|355702910|gb|EHH29401.1| hypothetical protein EGK_09820, partial [Macaca mulatta]
Length = 555
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 172 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 231
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 238
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 232 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 289
Query: 239 QPVPMVGA----TANQYNGAQFAP 258
GA +A+ Y GA F P
Sbjct: 290 TMAAAFGAPGIISASPYAGAGFPP 313
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 56/91 (61%), Gaps = 7/91 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 200 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYNAC-------CTLR 252
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 105
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 253 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 283
>gi|426229469|ref|XP_004008813.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 1 [Ovis
aries]
Length = 557
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 174 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 233
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 238
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 234 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 291
Query: 239 QPVPMVGA----TANQYNGAQFAP 258
GA +A+ Y GA F P
Sbjct: 292 TMAAAFGAPGIMSASPYAGAGFPP 315
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 56/91 (61%), Gaps = 7/91 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 202 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 254
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 105
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 255 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 285
>gi|55824722|gb|AAH86489.1| Polypyrimidine tract binding protein 1 [Mus musculus]
Length = 555
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 173 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 232
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 238
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 233 AQHAKLSLDGQNIYN-ACCTLRIGFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 290
Query: 239 QPVPMVGA----TANQYNGAQFAP 258
GA +A+ Y GA F P
Sbjct: 291 TMAAAFGAPGIMSASPYAGAGFPP 314
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 56/91 (61%), Gaps = 7/91 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 201 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 253
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 105
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 254 IGFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 284
>gi|119581557|gb|EAW61153.1| polypyrimidine tract binding protein 1, isoform CRA_b [Homo
sapiens]
Length = 527
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 144 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 203
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 238
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 204 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 261
Query: 239 QPVPMVGA----TANQYNGAQFAP 258
GA +A+ Y GA F P
Sbjct: 262 TMAAAFGAPGIISASPYAGAGFPP 285
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 56/91 (61%), Gaps = 7/91 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 172 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 224
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 105
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 225 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 255
>gi|410949959|ref|XP_003981684.1| PREDICTED: LOW QUALITY PROTEIN: polypyrimidine tract-binding
protein 1 [Felis catus]
Length = 508
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 174 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 233
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 238
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 234 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 291
Query: 239 QPVPMVGA----TANQYNGAQFAP 258
GA +A+ Y GA F P
Sbjct: 292 TMAAAFGAPGIMSASPYAGAGFPP 315
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 56/91 (61%), Gaps = 7/91 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 202 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYNAC-------CTLR 254
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 105
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 255 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 285
>gi|348550210|ref|XP_003460925.1| PREDICTED: polypyrimidine tract-binding protein 1-like isoform 1
[Cavia porcellus]
Length = 557
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 174 GLAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNSQFQALLQYADPVS 233
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 238
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 234 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 291
Query: 239 QPVPMVGA----TANQYNGAQFAP 258
GA +A+ Y GA F P
Sbjct: 292 TMAAAFGAPGIISASPYAGAGFPP 315
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 57/91 (62%), Gaps = 7/91 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K + FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 202 QIFSKFGTVLKIITFTKNSQFQALLQYADPVSAQHAKLSLDGQNIYNAC-------CTLR 254
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 105
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 255 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 285
>gi|440893263|gb|ELR46101.1| Polypyrimidine tract-binding protein 1, partial [Bos grunniens
mutus]
Length = 548
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 165 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 224
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 238
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 225 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 282
Query: 239 QPVPMVGA----TANQYNGAQFAP 258
GA +A+ Y GA F P
Sbjct: 283 TMAAAFGAPGIMSASPYAGAGFPP 306
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 56/91 (61%), Gaps = 7/91 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 193 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 245
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 105
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 246 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 276
>gi|73987389|ref|XP_542215.2| PREDICTED: polypyrimidine tract-binding protein 1 isoform 1 [Canis
lupus familiaris]
Length = 557
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 174 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 233
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 238
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 234 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 291
Query: 239 QPVPMVGA----TANQYNGAQFAP 258
GA +A+ Y GA F P
Sbjct: 292 TMAAAFGAPGIMSASPYAGAGFPP 315
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 56/91 (61%), Gaps = 7/91 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 202 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 254
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 105
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 255 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 285
>gi|30583817|gb|AAP36157.1| Homo sapiens polypyrimidine tract binding protein 1 [synthetic
construct]
gi|61369451|gb|AAX43339.1| polypyrimidine tract binding protein 1 [synthetic construct]
Length = 558
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 174 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 233
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 238
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 234 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 291
Query: 239 QPVPMVGA----TANQYNGAQFAP 258
GA +A+ Y GA F P
Sbjct: 292 TMAAAFGAPGIISASPYAGAGFPP 315
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 56/91 (61%), Gaps = 7/91 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 202 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 254
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 105
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 255 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 285
>gi|402903486|ref|XP_003914596.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 1 [Papio
anubis]
gi|380814964|gb|AFE79356.1| polypyrimidine tract-binding protein 1 isoform a [Macaca mulatta]
gi|384948416|gb|AFI37813.1| polypyrimidine tract-binding protein 1 isoform a [Macaca mulatta]
Length = 556
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 173 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 232
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 238
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 233 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 290
Query: 239 QPVPMVGA----TANQYNGAQFAP 258
GA +A+ Y GA F P
Sbjct: 291 TMAAAFGAPGIISASPYAGAGFPP 314
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 56/91 (61%), Gaps = 7/91 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 201 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 253
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 105
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 254 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 284
>gi|4506243|ref|NP_002810.1| polypyrimidine tract-binding protein 1 isoform a [Homo sapiens]
gi|332850812|ref|XP_001172084.2| PREDICTED: polypyrimidine tract-binding protein 1 isoform 1 [Pan
troglodytes]
gi|32354|emb|CAA47386.1| nuclear ribonucleoprotein [Homo sapiens]
gi|35772|emb|CAA46444.1| polypirimidine tract binding protein [Homo sapiens]
gi|12803183|gb|AAH02397.1| Polypyrimidine tract binding protein 1 [Homo sapiens]
gi|15489171|gb|AAH13694.1| Polypyrimidine tract binding protein 1 [Homo sapiens]
gi|30582477|gb|AAP35465.1| polypyrimidine tract binding protein 1 [Homo sapiens]
gi|61359435|gb|AAX41718.1| polypyrimidine tract binding protein 1 [synthetic construct]
gi|61359442|gb|AAX41719.1| polypyrimidine tract binding protein 1 [synthetic construct]
gi|119581558|gb|EAW61154.1| polypyrimidine tract binding protein 1, isoform CRA_c [Homo
sapiens]
gi|410218528|gb|JAA06483.1| polypyrimidine tract binding protein 1 [Pan troglodytes]
gi|410301208|gb|JAA29204.1| polypyrimidine tract binding protein 1 [Pan troglodytes]
Length = 557
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 174 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 233
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 238
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 234 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 291
Query: 239 QPVPMVGA----TANQYNGAQFAP 258
GA +A+ Y GA F P
Sbjct: 292 TMAAAFGAPGIISASPYAGAGFPP 315
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 56/91 (61%), Gaps = 7/91 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 202 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 254
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 105
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 255 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 285
>gi|312378791|gb|EFR25262.1| hypothetical protein AND_09562 [Anopheles darlingi]
Length = 399
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/100 (55%), Positives = 68/100 (68%), Gaps = 1/100 (1%)
Query: 128 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 187
VL +E++ Y V+LDVLH +F FG V KI F KN QALIQYPD QTA AK++L+
Sbjct: 164 VLRVIVESLLYPVSLDVLHQIFQRFGKVLKIVTFTKNNSFQALIQYPDAQTAQTAKQSLD 223
Query: 188 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
G IY+ G C L I S+ T L++K NND+SRDYT PS P
Sbjct: 224 GQNIYN-GCCTLRIDNSKLTALNVKYNNDKSRDYTNPSLP 262
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 56/87 (64%), Gaps = 7/87 (8%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+F FG V KI TF K FQAL+Q+ D +TA +AK +LDG++I G CTLR
Sbjct: 183 QIFQRFGKVLKIVTFTKNNSFQALIQYPDAQTAQTAKQSLDGQNIYN-------GCCTLR 235
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLP 101
I S T L+VK+ + +SRDYTNP LP
Sbjct: 236 IDNSKLTALNVKYNNDKSRDYTNPSLP 262
>gi|291227384|ref|XP_002733659.1| PREDICTED: polypyrimidine tract-binding protein 1-like
[Saccoglossus kowalevskii]
Length = 558
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 90/176 (51%), Gaps = 14/176 (7%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G L ++ VL +ENM Y VT+D+LH +FS FG V KI F+KN QALIQ+ D +
Sbjct: 179 GDTLGGQNTVLRVIVENMLYPVTVDILHQIFSKFGAVLKIITFNKNNTFQALIQFADAVS 238
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 238
A +K +L+G IY+ C L I YS+ T L++K NND+SRDYT P P + QP +
Sbjct: 239 AQASKLSLDGQNIYN-ACCTLRIDYSKLTTLNVKYNNDKSRDYTRPDLPSGDGQPPL--- 294
Query: 239 QPVPMVGATANQYNGAQFAPPPPE----QPMMHQPTAAGWGAVPPASQSMPMMGNH 290
P G N A P P P AG+GA P M M H
Sbjct: 295 DPAMAFG------NAAPGMLPTPNAAAMGAAFANPALAGYGATVPGLPGMYSMPTH 344
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 59/94 (62%), Gaps = 7/94 (7%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + Q+FS FG V KI TF K FQAL+QF+D +A ++K +LDG++I
Sbjct: 200 VTVDILHQIFSKFGAVLKIITFNKNNTFQALIQFADAVSAQASKLSLDGQNIYN------ 253
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLP 101
CTLRI YS T L+VK+ + +SRDYT P LP
Sbjct: 254 -ACCTLRIDYSKLTTLNVKYNNDKSRDYTRPDLP 286
>gi|334326796|ref|XP_001375584.2| PREDICTED: polypyrimidine tract-binding protein 1-like [Monodelphis
domestica]
Length = 557
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/138 (48%), Positives = 84/138 (60%), Gaps = 6/138 (4%)
Query: 125 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 184
+S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +A AK
Sbjct: 180 QSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYSDPVSAQHAKL 239
Query: 185 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMV 244
+L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 240 SLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQTMAAAF 297
Query: 245 GA----TANQYNGAQFAP 258
GA +A+ Y GA F P
Sbjct: 298 GAPGIISASPYAGAGFPP 315
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 56/91 (61%), Gaps = 7/91 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q+SD +A AK +LDG++I CTLR
Sbjct: 202 QIFSKFGTVLKIITFTKNNQFQALLQYSDPVSAQHAKLSLDGQNIYN-------ACCTLR 254
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 105
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 255 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 285
>gi|22329999|ref|NP_175010.2| polypyrimidine tract-binding protein 3 [Arabidopsis thaliana]
gi|145324166|ref|NP_001077672.1| polypyrimidine tract-binding protein 3 [Arabidopsis thaliana]
gi|75323651|sp|Q6ICX4.1|PTBP3_ARATH RecName: Full=Polypyrimidine tract-binding protein homolog 3
gi|48525347|gb|AAT44975.1| At1g43190 [Arabidopsis thaliana]
gi|50198952|gb|AAT70479.1| At1g43190 [Arabidopsis thaliana]
gi|110737368|dbj|BAF00629.1| hypothetical protein [Arabidopsis thaliana]
gi|332193840|gb|AEE31961.1| polypyrimidine tract-binding protein 3 [Arabidopsis thaliana]
gi|332193841|gb|AEE31962.1| polypyrimidine tract-binding protein 3 [Arabidopsis thaliana]
Length = 432
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 89/268 (33%), Positives = 127/268 (47%), Gaps = 52/268 (19%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCT 72
+LQ+F FG + K+ A QAL+Q D +A SA N+ P T
Sbjct: 22 LLQLFQPFGVITKLVMLR--AKNQALLQMQDVSSAVSALQFF-----------TNVQP-T 67
Query: 73 LRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLAS 132
+R ++ V+F SH+ + I+ + + G++ EP + +LL +
Sbjct: 68 IR-----GRNVYVQFSSHQE-----------LTTIEQN------IHGREDEP-NRILLVT 104
Query: 133 IENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 192
I +M Y +T+DVLH VFS +G V+K+ F K+ G QALIQY Q A A+ AL+G IY
Sbjct: 105 IHHMLYPITVDVLHQVFSPYGFVEKLVTFQKSAGFQALIQYQVQQCAASARTALQGRNIY 164
Query: 193 DGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQYN 252
DG C+L I +S +L + NNDRSRDYT P+ P G+ P G T Y
Sbjct: 165 DGC-CQLDIQFSNLEELQVNYNNDRSRDYTNPNLPAEQK-----GRSSHPCYGDTGVAY- 217
Query: 253 GAQFAPPPPEQPMMHQPTAAGWGAVPPA 280
P+ AA G +PP
Sbjct: 218 --------PQMANTSAIAAAFGGGLPPG 237
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 112/220 (50%), Gaps = 39/220 (17%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
QVFS +GFV K+ TF+K+AGFQAL+Q+ + A+SA+ AL GR+I G C L
Sbjct: 119 QVFSPYGFVEKLVTFQKSAGFQALIQYQVQQCAASARTALQGRNIYD-------GCCQLD 171
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVA----------------------PSAIDAS-- 110
I +S +L V + + RSRDYTNP LP SAI A+
Sbjct: 172 IQFSNLEELQVNYNNDRSRDYTNPNLPAEQKGRSSHPCYGDTGVAYPQMANTSAIAAAFG 231
Query: 111 GQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQAL 170
G L G+ G VL++++ ++ D L +FS +G + +I + +N AL
Sbjct: 232 GGLPPGITGTN--DRCTVLVSNLN--ADSIDEDKLFNLFSLYGNIVRIKLL-RNKPDHAL 286
Query: 171 IQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLS 210
+Q D A +A L+G ++ +L +++S+H +++
Sbjct: 287 VQMGDGFQAELAVHFLKGAMLFGK---RLEVNFSKHPNIT 323
>gi|395513379|ref|XP_003760903.1| PREDICTED: polypyrimidine tract-binding protein 1 [Sarcophilus
harrisii]
Length = 557
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/138 (48%), Positives = 84/138 (60%), Gaps = 6/138 (4%)
Query: 125 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 184
+S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +A AK
Sbjct: 180 QSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYSDPVSAQHAKL 239
Query: 185 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMV 244
+L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 240 SLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQTMAAAF 297
Query: 245 GA----TANQYNGAQFAP 258
GA +A+ Y GA F P
Sbjct: 298 GAPGIISASPYAGAGFPP 315
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 56/91 (61%), Gaps = 7/91 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q+SD +A AK +LDG++I CTLR
Sbjct: 202 QIFSKFGTVLKIITFTKNNQFQALLQYSDPVSAQHAKLSLDGQNIYN-------ACCTLR 254
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 105
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 255 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 285
>gi|345323919|ref|XP_001506947.2| PREDICTED: polypyrimidine tract-binding protein 1 [Ornithorhynchus
anatinus]
Length = 707
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/166 (44%), Positives = 94/166 (56%), Gaps = 15/166 (9%)
Query: 97 NPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQ 156
N L + +A+DA G GL S VL +EN+ Y VTLDVLH +FS FG V
Sbjct: 311 NMALSASAAAVDA-GMAIAGL--------SPVLRIIVENLFYPVTLDVLHQIFSKFGTVL 361
Query: 157 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 216
KI F KN QAL+QY + +A AK +L+G IY+ C L I +S+ T L++K NND
Sbjct: 362 KIITFTKNNQFQALLQYAEPMSAQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNND 420
Query: 217 RSRDYTLPSTPMVNSQPSILGQQPVPMVGA----TANQYNGAQFAP 258
+SRDYT P P +SQPS L Q GA +A+ Y GA F P
Sbjct: 421 KSRDYTRPDLPSGDSQPS-LDQTMAAAFGAPGIISASPYAGAGFPP 465
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 56/91 (61%), Gaps = 7/91 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q+++ +A AK +LDG++I CTLR
Sbjct: 352 QIFSKFGTVLKIITFTKNNQFQALLQYAEPMSAQHAKLSLDGQNIYNAC-------CTLR 404
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 105
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 405 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 435
>gi|297852124|ref|XP_002893943.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297339785|gb|EFH70202.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 432
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 78/215 (36%), Positives = 113/215 (52%), Gaps = 38/215 (17%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCT 72
+LQ+F FG + K+ A QAL+Q D +A SA N+ P T
Sbjct: 22 LLQLFQPFGVITKLVMLR--AKNQALLQMQDVSSAISALQFF-----------TNVQP-T 67
Query: 73 LRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLAS 132
+R ++ V+F SH+ + I+ + + G++ EP + +LL +
Sbjct: 68 IR-----GRNVYVQFSSHQE-----------LTTIEQN------IHGREDEP-NRILLVT 104
Query: 133 IENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 192
I +M Y +T+DVLH VFS +G V+K+ F K+ G QALIQY Q A A+ AL+G IY
Sbjct: 105 IHHMLYPITVDVLHQVFSPYGFVEKLVTFQKSAGFQALIQYQVQQCAASARTALQGRNIY 164
Query: 193 DGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
DG C+L I +S +L + NNDRSRDYT P+ P
Sbjct: 165 DGC-CQLDIQFSNLEELQVNYNNDRSRDYTNPNLP 198
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 112/220 (50%), Gaps = 39/220 (17%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
QVFS +GFV K+ TF+K+AGFQAL+Q+ + A+SA+ AL GR+I G C L
Sbjct: 119 QVFSPYGFVEKLVTFQKSAGFQALIQYQVQQCAASARTALQGRNIYD-------GCCQLD 171
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVA----------------------PSAIDAS-- 110
I +S +L V + + RSRDYTNP LP SAI A+
Sbjct: 172 IQFSNLEELQVNYNNDRSRDYTNPNLPAEQKGRSSHPGYGDVGVAYPQMANTSAIAAAFG 231
Query: 111 GQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQAL 170
G L G+ G VL++++ ++ D L +FS +G + +I + +N AL
Sbjct: 232 GGLPPGITGTN--DRCTVLVSNLN--ADSIDEDKLFNLFSLYGNIVRIKLL-RNKPDHAL 286
Query: 171 IQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLS 210
+Q D A +A L+G ++ +L +++S+H +++
Sbjct: 287 VQMGDGFQAELAVHFLKGAVLFGK---RLEVNFSKHPNIT 323
>gi|47523538|ref|NP_999396.1| polypyrimidine tract-binding protein 1 [Sus scrofa]
gi|2500586|sp|Q29099.1|PTBP1_PIG RecName: Full=Polypyrimidine tract-binding protein 1; Short=PTB;
AltName: Full=Heterogeneous nuclear ribonucleoprotein I;
Short=hnRNP I
gi|1122433|emb|CAA63597.1| polypyrimidine tract-binding protein [Sus scrofa]
Length = 557
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 174 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 233
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 238
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P ++QPS L Q
Sbjct: 234 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDNQPS-LDQ 291
Query: 239 QPVPMVGA----TANQYNGAQFAP 258
GA +A+ Y GA F P
Sbjct: 292 TMAAAFGAPGIMSASPYAGAGFPP 315
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 55/87 (63%), Gaps = 7/87 (8%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 202 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 254
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLP 101
I +S T L+VK+ + +SRDYT P LP
Sbjct: 255 IDFSKLTSLNVKYNNDKSRDYTRPDLP 281
>gi|147906715|ref|NP_001083815.1| polypyrimidine tract binding protein 1 [Xenopus laevis]
gi|6002571|gb|AAF00041.1|AF091370_1 hnRNP I-related RNA transport protein VgRBP60 [Xenopus laevis]
Length = 552
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 85/144 (59%), Gaps = 7/144 (4%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVL +FS FG V KI F KN QAL+QY D +
Sbjct: 177 GIAMSGQSPVLRIIVENLFYPVTLDVLQQIFSKFGTVLKIITFTKNNQFQALLQYGDPVS 236
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 238
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P + QPS+
Sbjct: 237 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDGQPSL--D 293
Query: 239 QPVPMVGA----TANQYNGAQFAP 258
Q + GA +AN Y GA F P
Sbjct: 294 QTIAAFGAPGLISANPYAGAGFHP 317
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 60/99 (60%), Gaps = 12/99 (12%)
Query: 3 LTLSLLKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRY 62
+TL +L+ Q+FS FG V KI TF K FQAL+Q+ D +A AK +LDG++I
Sbjct: 198 VTLDVLQ-----QIFSKFGTVLKIITFTKNNQFQALLQYGDPVSAQHAKLSLDGQNIYN- 251
Query: 63 LLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLP 101
CTLRI +S T L+VK+ + +SRDYT P LP
Sbjct: 252 ------ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLP 284
>gi|348505292|ref|XP_003440195.1| PREDICTED: regulator of differentiation 1 [Oreochromis niloticus]
Length = 514
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 94/281 (33%), Positives = 131/281 (46%), Gaps = 51/281 (18%)
Query: 20 FGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDG-----RSIPRYLLPENMGPCTLR 74
FG V K+ T KT QA ++ + E A + N RS P Y
Sbjct: 65 FGRVSKLITL-KTKN-QAFLEMASEEAAVTMVNYYTSATPSIRSQPVY------------ 110
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDA----SGQLSVGLDGKKLEP-ESNVL 129
I YS H +L ++ + T+ A AI+A SG ++ G +G+ + P +S VL
Sbjct: 111 IQYSTHREL-------KTDNMTSQRAQAALQAINAGAVHSGNMTSGGEGRGIAPGQSPVL 163
Query: 130 LASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGH 189
+EN+ Y VTL+VL +FS FG V KI F +N QAL+Q+ D A AK L+G
Sbjct: 164 RIIVENLFYPVTLEVLQQIFSKFGSVLKIITFTRNNQFQALLQFSDTVHAQHAKATLDGQ 223
Query: 190 CIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT---LPSTPMVNSQPSILGQQPVPMVGA 246
IY+G C L I +S+ + L++K NND+SRD+T LPS + +P G
Sbjct: 224 NIYNGC-CTLRIDFSKLSALNVKYNNDKSRDFTRADLPSGEL----------EPTAAFGV 272
Query: 247 TANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMPMM 287
Y A F P HQ T AVP + S P +
Sbjct: 273 ALPPYGAAAFP------PTFHQHTGLSMAAVPGSLVSHPRV 307
>gi|387017724|gb|AFJ50980.1| Polypyrimidine tract-binding protein 1-like [Crotalus adamanteus]
Length = 556
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 174 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 233
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 238
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P ++QPS L Q
Sbjct: 234 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDNQPS-LDQ 291
Query: 239 QPVPMVGA----TANQYNGAQFAP 258
GA +A+ Y GA F P
Sbjct: 292 TMAAAFGAPGIISASPYAGAGFPP 315
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 55/87 (63%), Gaps = 7/87 (8%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 202 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 254
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLP 101
I +S T L+VK+ + +SRDYT P LP
Sbjct: 255 IDFSKLTSLNVKYNNDKSRDYTRPDLP 281
>gi|449273011|gb|EMC82640.1| Polypyrimidine tract-binding protein 1, partial [Columba livia]
Length = 525
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 64/149 (42%), Positives = 87/149 (58%), Gaps = 10/149 (6%)
Query: 87 FQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLH 146
Q+ S N L +P+A+DA G + +S VL +EN+ Y VTLDVLH
Sbjct: 120 LQAVNSVQSGNLALLASPAAVDA---------GMAMAGQSPVLRIIVENLFYPVTLDVLH 170
Query: 147 MVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRH 206
+FS FG V KI F KN QAL+QY D +A AK +L+G IY+ C L I +S+
Sbjct: 171 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-ACCTLRIEFSKL 229
Query: 207 TDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
T L++K NND+SRDYT P P ++QP++
Sbjct: 230 TSLNVKYNNDKSRDYTRPDLPSGDNQPAL 258
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 55/87 (63%), Gaps = 7/87 (8%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 171 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 223
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLP 101
I +S T L+VK+ + +SRDYT P LP
Sbjct: 224 IEFSKLTSLNVKYNNDKSRDYTRPDLP 250
>gi|148224882|ref|NP_001080169.1| polypyrimidine tract binding protein 1 [Xenopus laevis]
gi|28278766|gb|AAH45068.1| Ptbp1 protein [Xenopus laevis]
Length = 547
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 69/165 (41%), Positives = 93/165 (56%), Gaps = 16/165 (9%)
Query: 98 PYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQK 157
P L + + +DAS + + G +S VL +EN+ Y VTLDVL +FS FG V K
Sbjct: 159 PVLSASAAVVDAS----IAMSG-----QSPVLRIIVENLFYPVTLDVLQQIFSKFGTVLK 209
Query: 158 IAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDR 217
I F KN QAL+QY D +A AK +L+G IY+ C L I +S+ T L++K NND+
Sbjct: 210 IITFTKNNQFQALLQYGDPMSAQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDK 268
Query: 218 SRDYTLPSTPMVNSQPSILGQQPVPMVGA----TANQYNGAQFAP 258
SRDYT P P + QP++ Q + GA + N Y GA F P
Sbjct: 269 SRDYTRPDLPSGDGQPTL--DQTIAAFGAPGLISTNPYAGAGFPP 311
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 60/99 (60%), Gaps = 12/99 (12%)
Query: 3 LTLSLLKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRY 62
+TL +L+ Q+FS FG V KI TF K FQAL+Q+ D +A AK +LDG++I
Sbjct: 192 VTLDVLQ-----QIFSKFGTVLKIITFTKNNQFQALLQYGDPMSAQHAKLSLDGQNIYN- 245
Query: 63 LLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLP 101
CTLRI +S T L+VK+ + +SRDYT P LP
Sbjct: 246 ------ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLP 278
>gi|417402720|gb|JAA48196.1| Putative polypyrimidine tract-binding protein [Desmodus rotundus]
Length = 557
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY + +
Sbjct: 174 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYAEPVS 233
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 238
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 234 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 291
Query: 239 QPVPMVGA----TANQYNGAQFAP 258
GA +A+ Y GA F P
Sbjct: 292 TMAAAFGAPGIMSASPYAGAGFPP 315
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 56/91 (61%), Gaps = 7/91 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q+++ +A AK +LDG++I CTLR
Sbjct: 202 QIFSKFGTVLKIITFTKNNQFQALLQYAEPVSAQHAKLSLDGQNIYN-------ACCTLR 254
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 105
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 255 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 285
>gi|357126039|ref|XP_003564696.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
[Brachypodium distachyon]
Length = 443
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/224 (36%), Positives = 110/224 (49%), Gaps = 40/224 (17%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRY--LLPENMGP 70
+LQV FG V K+ A QALVQ D + SA I Y + P G
Sbjct: 22 LLQVVQPFGTVAKLVMLR--AKNQALVQMEDLAASVSA--------IQYYTTIQPSVRGR 71
Query: 71 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLL 130
+ + YS+H +L+ SH G + + EP + +LL
Sbjct: 72 -NVYLQYSSHQELTTDQSSH-------------------------GRNPDQDEP-NRILL 104
Query: 131 ASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHC 190
++ +M Y +T++VLH VFS +G V+KI F K G QALIQY Q+A+ A AL G
Sbjct: 105 VTVHHMLYPMTVEVLHQVFSPYGFVEKIVTFQKTAGFQALIQYQSRQSAIQACGALHGRN 164
Query: 191 IYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPS 234
IYD G C+L I YS ++L + NNDRSRD+T PS P Q S
Sbjct: 165 IYD-GCCQLDIQYSNLSELQVHYNNDRSRDFTNPSLPTEQRQRS 207
>gi|356559629|ref|XP_003548101.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
[Glycine max]
Length = 439
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/247 (33%), Positives = 116/247 (46%), Gaps = 52/247 (21%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPC- 71
+LQ+F FG + K+ A QAL+Q D SA NAL N+ P
Sbjct: 22 LLQLFQPFGVITKLVMLR--AKNQALLQMQDI---PSAVNALQ--------FYANVQPSI 68
Query: 72 ---TLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNV 128
+ + +S+H +L+ Q+ D EP + +
Sbjct: 69 RGRNVYVQFSSHQELTTMDQNQARED----------------------------EP-NRI 99
Query: 129 LLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEG 188
LL ++ +M Y +T DVLH VFS G V+KI F K+ G QALIQY Q+AV A+ L+G
Sbjct: 100 LLVTVHHMLYPITADVLHQVFSPHGFVEKIVTFQKSAGFQALIQYQSRQSAVTARSTLQG 159
Query: 189 HCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATA 248
IYDG C+L I +S +L + NNDRSRD+T P+ P G+ P G A
Sbjct: 160 RNIYDGC-CQLDIQFSNLDELQVNYNNDRSRDFTNPNLPTEQK-----GRSSQPGYGDAA 213
Query: 249 NQYNGAQ 255
Y+GA+
Sbjct: 214 GMYSGAR 220
>gi|224066621|ref|XP_002302167.1| predicted protein [Populus trichocarpa]
gi|222843893|gb|EEE81440.1| predicted protein [Populus trichocarpa]
Length = 436
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/215 (37%), Positives = 114/215 (53%), Gaps = 38/215 (17%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCT 72
+LQ+F FG + K+ A QAL+Q D SA NAL L N+ P T
Sbjct: 22 LLQLFQPFGVITKLVMLR--AKNQALLQMQD---VPSAINALQ--------LYTNIQP-T 67
Query: 73 LRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLAS 132
+R ++ V+F SH+ + +D + Q G+ EP + +LL +
Sbjct: 68 IR-----GRNVYVQFSSHQE-----------LTTMDQNTQ------GRGDEP-NRILLVT 104
Query: 133 IENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 192
I +M Y +T++VLH VFS G V+KI F K+ G QALIQY Q AV A+ +L+G IY
Sbjct: 105 IHHMLYPITVEVLHQVFSPHGFVEKIVTFQKSAGFQALIQYQSRQCAVQARTSLQGRNIY 164
Query: 193 DGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
DG C+L I +S +L + NNDRSRD+T P+ P
Sbjct: 165 DGC-CQLDIQFSNLDELQVNYNNDRSRDFTNPNLP 198
>gi|357497747|ref|XP_003619162.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
gi|355494177|gb|AES75380.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
Length = 354
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/215 (36%), Positives = 110/215 (51%), Gaps = 39/215 (18%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCT 72
+LQ+F FG V K+ A QALVQ D +A SA I Y+ N P
Sbjct: 22 LLQLFQPFGVVTKLVMLR--AKNQALVQMQDVASADSA--------IQFYI---NSQPSI 68
Query: 73 LRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLAS 132
++ V+F SHR + +D + G++ EP + +LL +
Sbjct: 69 ------RGRNVYVQFSSHRE-----------LTTMDQN-------QGREDEP-NRILLVT 103
Query: 133 IENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 192
+ + Y +T+DVL VFS G V+KI F K+ G QALIQY Q+AV A+ AL+G +Y
Sbjct: 104 VHQVLYPMTVDVLQQVFSPHGFVEKIVTFQKSAGFQALIQYETRQSAVTARGALQGRNVY 163
Query: 193 DGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
D G C+L I +S +L + NNDRSRD+T P+ P
Sbjct: 164 D-GCCQLDIQFSNLDELQVNYNNDRSRDFTNPNLP 197
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 59/94 (62%), Gaps = 7/94 (7%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + QVFS GFV KI TF+K+AGFQAL+Q+ ++A +A+ AL GR++
Sbjct: 111 MTVDVLQQVFSPHGFVEKIVTFQKSAGFQALIQYETRQSAVTARGALQGRNVYD------ 164
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLP 101
G C L I +S +L V + + RSRD+TNP LP
Sbjct: 165 -GCCQLDIQFSNLDELQVNYNNDRSRDFTNPNLP 197
>gi|357443609|ref|XP_003592082.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
gi|355481130|gb|AES62333.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
gi|388492616|gb|AFK34374.1| unknown [Medicago truncatula]
Length = 443
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 130/279 (46%), Gaps = 63/279 (22%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKN-------ALDGRSIPRYLLP 65
+LQ+F FG + K+ A QAL+Q D +A SA + ++ GR++
Sbjct: 22 LLQLFQPFGVITKLVMLR--AKNQALIQMQDVPSAVSALHFYGNTQPSIRGRNV------ 73
Query: 66 ENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPE 125
+ +S+H +L+ QS G+ EP
Sbjct: 74 --------YVQFSSHQELTTIDQSQ----------------------------GRGDEP- 96
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ +LL +I ++ Y +T+DVL+ VFS G V+KI F K+ G QALIQY Q+++ A+ A
Sbjct: 97 NRILLVTIHHVLYPITVDVLYQVFSPHGSVEKIVTFQKSAGFQALIQYQSQQSSITARTA 156
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 245
L+G IYD G C+L I +S +L + NNDRSRD+T P+ P G+ P G
Sbjct: 157 LQGRNIYD-GCCQLDIQFSNLDELQVNYNNDRSRDFTNPNLPTEQK-----GRPPQLGYG 210
Query: 246 ATANQYNGAQFAPPP----PEQPMMHQPTAAGWGAVPPA 280
N Y G Q + P P+ P AA G +PP
Sbjct: 211 DAGNMY-GVQGSGPRTVGYPQMPNAAAIAAAFGGGLPPG 248
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 111/236 (47%), Gaps = 45/236 (19%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + QVFS G V KI TF+K+AGFQAL+Q+ +++ +A+ AL GR+I
Sbjct: 111 ITVDVLYQVFSPHGSVEKIVTFQKSAGFQALIQYQSQQSSITARTALQGRNIYD------ 164
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS---------------AIDASGQ 112
G C L I +S +L V + + RSRD+TNP LP + SG
Sbjct: 165 -GCCQLDIQFSNLDELQVNYNNDRSRDFTNPNLPTEQKGRPPQLGYGDAGNMYGVQGSGP 223
Query: 113 LSVGL------------DGKKLEP------ESNVLLASIENMQYAVTLDVLHMVFSAFGP 154
+VG G L P + LL S N + D L +FS +G
Sbjct: 224 RTVGYPQMPNAAAIAAAFGGGLPPGITGTNDRCTLLVSNLNPD-RIDEDKLFNLFSLYGN 282
Query: 155 VQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLS 210
+ +I + +N ALIQ D A +A L+G ++D +L +++S+H +++
Sbjct: 283 IVRIKLL-RNKPDHALIQMGDGFQAELAVHFLKGAMLFDK---RLEVNFSKHPNIT 334
>gi|347970969|ref|XP_318405.4| AGAP003945-PA [Anopheles gambiae str. PEST]
gi|333469570|gb|EAA13599.5| AGAP003945-PA [Anopheles gambiae str. PEST]
Length = 601
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VL +E++ Y V+LDVLH +F FG V KI F KN QALIQYPD QTA A+ +
Sbjct: 213 NTVLRVIVESLLYPVSLDVLHQIFQRFGKVLKIVTFTKNNSFQALIQYPDAQTAQTARAS 272
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
L+G IY+ G C L I S+ T L++K NND+SRDYT PS P
Sbjct: 273 LDGQNIYN-GCCTLRIDNSKLTALNVKYNNDKSRDYTNPSLP 313
>gi|218189437|gb|EEC71864.1| hypothetical protein OsI_04570 [Oryza sativa Indica Group]
Length = 443
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/226 (36%), Positives = 114/226 (50%), Gaps = 40/226 (17%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCT 72
+LQV FG V K+ A QALVQ D +SA N + + + P G
Sbjct: 22 LLQVVQPFGTVAKLVMLR--AKNQALVQMEDL---ASAVNVIQYYNT---IQPSVRGR-N 72
Query: 73 LRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLAS 132
+ + YS+H +L+ SH G + + EP + +LL +
Sbjct: 73 VYLQYSSHQELTTDQSSH-------------------------GRNPDQEEP-NRILLVT 106
Query: 133 IENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 192
I +M Y +T++VLH VFS +G V+KI F K+ G Q LIQY Q+A+ A AL G IY
Sbjct: 107 IHHMLYPITIEVLHQVFSPYGFVEKIVTFQKSAGFQTLIQYQSRQSAIQAYGALHGRNIY 166
Query: 193 DGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM----VNSQPS 234
DG C+L I YS ++L + NNDRSRD+T PS P +SQPS
Sbjct: 167 DGC-CQLDIQYSNLSELQVHYNNDRSRDFTNPSLPTEQRSRSSQPS 211
>gi|338720441|ref|XP_003364168.1| PREDICTED: regulator of differentiation 1 isoform 2 [Equus
caballus]
Length = 457
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/246 (34%), Positives = 113/246 (45%), Gaps = 46/246 (18%)
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGL------DGKKLEPESNV 128
I YS H +L +++R + A A+ A S+ L +G L +S V
Sbjct: 33 IQYSNHRELKTDNLPNQAR------VQAALQAVSAVQSGSLALPGAPTNEGTVLPGQSPV 86
Query: 129 LLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEG 188
L IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D A AK AL+G
Sbjct: 87 LRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPLNAHYAKMALDG 146
Query: 189 HCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATA 248
IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 147 QNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL------------- 192
Query: 249 NQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMPMMGNHPYMPPGSMPMGPGMMQMH 308
E PM AA +GA P S P G + P P G G+
Sbjct: 193 -------------EPPM-----AAAFGA--PGIISSPYAGAAGFAPAIGFPQGTGLSVQT 232
Query: 309 MPGQSG 314
+PG G
Sbjct: 233 VPGALG 238
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 53/87 (60%), Gaps = 7/87 (8%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 105 QIFSKFGTVLKIITFTKNNQFQALLQYADPLNAHYAKMALDGQNIYN-------ACCTLR 157
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLP 101
I +S T L+VK+ + +SRD+T LP
Sbjct: 158 IDFSKLTSLNVKYNNDKSRDFTRLDLP 184
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 80/198 (40%), Gaps = 22/198 (11%)
Query: 11 IFILQVFSAFGFVHKITT-FEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMG 69
+FIL F +G VH++ F K ALVQ +D A A N L G + +
Sbjct: 280 LFIL--FGVYGDVHRVKIMFNKKE--NALVQMADANQAQLAMNHLSG---------QRLY 326
Query: 70 PCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVL 129
LR T S H + + + + T + G + + + P S L
Sbjct: 327 GKVLRATLSKHQAVQLPREGQEDQGLTKDFSNSPLHRFKKPGSKNF----QNIFPPSATL 382
Query: 130 LASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGH 189
+ N+ +VT+D L +F+ G K F + ALIQ V+ A+ A L H
Sbjct: 383 --HLSNIPPSVTVDDLKNLFTEAGCSVKAFKFFQKDRKMALIQLGSVEEAIQALIELHNH 440
Query: 190 CIYDGGFCKLHISYSRHT 207
+ G L +S+S+ T
Sbjct: 441 DL--GENHHLRVSFSKST 456
>gi|338720439|ref|XP_001490810.2| PREDICTED: regulator of differentiation 1 isoform 1 [Equus
caballus]
Length = 523
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/246 (34%), Positives = 113/246 (45%), Gaps = 46/246 (18%)
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGL------DGKKLEPESNV 128
I YS H +L +++R + A A+ A S+ L +G L +S V
Sbjct: 99 IQYSNHRELKTDNLPNQAR------VQAALQAVSAVQSGSLALPGAPTNEGTVLPGQSPV 152
Query: 129 LLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEG 188
L IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D A AK AL+G
Sbjct: 153 LRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPLNAHYAKMALDG 212
Query: 189 HCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATA 248
IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 213 QNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL------------- 258
Query: 249 NQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMPMMGNHPYMPPGSMPMGPGMMQMH 308
E PM AA +GA P S P G + P P G G+
Sbjct: 259 -------------EPPM-----AAAFGA--PGIISSPYAGAAGFAPAIGFPQGTGLSVQT 298
Query: 309 MPGQSG 314
+PG G
Sbjct: 299 VPGALG 304
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 53/87 (60%), Gaps = 7/87 (8%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 171 QIFSKFGTVLKIITFTKNNQFQALLQYADPLNAHYAKMALDGQNIYN-------ACCTLR 223
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLP 101
I +S T L+VK+ + +SRD+T LP
Sbjct: 224 IDFSKLTSLNVKYNNDKSRDFTRLDLP 250
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 81/198 (40%), Gaps = 22/198 (11%)
Query: 11 IFILQVFSAFGFVHKITT-FEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMG 69
+FIL F +G VH++ F K ALVQ +D A A N L G+ + +L
Sbjct: 346 LFIL--FGVYGDVHRVKIMFNKKE--NALVQMADANQAQLAMNHLSGQRLYGKVL----- 396
Query: 70 PCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVL 129
R T S H + + + + T + G + + + P S L
Sbjct: 397 ----RATLSKHQAVQLPREGQEDQGLTKDFSNSPLHRFKKPGSKNF----QNIFPPSATL 448
Query: 130 LASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGH 189
+ N+ +VT+D L +F+ G K F + ALIQ V+ A+ A L H
Sbjct: 449 --HLSNIPPSVTVDDLKNLFTEAGCSVKAFKFFQKDRKMALIQLGSVEEAIQALIELHNH 506
Query: 190 CIYDGGFCKLHISYSRHT 207
+ G L +S+S+ T
Sbjct: 507 DL--GENHHLRVSFSKST 522
>gi|115464105|ref|NP_001055652.1| Os05g0437300 [Oryza sativa Japonica Group]
gi|113579203|dbj|BAF17566.1| Os05g0437300 [Oryza sativa Japonica Group]
gi|215734982|dbj|BAG95704.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218196864|gb|EEC79291.1| hypothetical protein OsI_20097 [Oryza sativa Indica Group]
gi|222631716|gb|EEE63848.1| hypothetical protein OsJ_18672 [Oryza sativa Japonica Group]
Length = 444
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/276 (34%), Positives = 130/276 (47%), Gaps = 58/276 (21%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKN-------ALDGRSIPRYLLP 65
+LQ+ FG V KI A QAL+Q D + SA ++ GR++
Sbjct: 22 LLQLLQPFGNVSKIVMLR--AKNQALLQMQDLHNSVSALQYYSTVQPSVRGRNV------ 73
Query: 66 ENMGPCTLRITYSAHTDLSVKFQSH-RSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEP 124
+ +S+H +L+ SH R+ D ++ EP
Sbjct: 74 --------YMQFSSHQELTTDQNSHGRNSD-------------------------QESEP 100
Query: 125 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 184
+ +LL +I +M Y +T++VLH VF A+G V+KI F K+ G QALIQY +Q A+ A
Sbjct: 101 -NRILLVTIHHMMYPITVEVLHQVFKAYGYVEKIVTFQKSAGFQALIQYQSLQEAMDAFG 159
Query: 185 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMV 244
AL G IYDG C+L I YS ++L + NNDRSRD+T PS P Q QQ P
Sbjct: 160 ALHGRNIYDGC-CQLDIQYSNLSELQVHYNNDRSRDFTNPSLP--TEQRPRASQQGYPDP 216
Query: 245 GAT-ANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPP 279
G A Q GA +A + TAA G +PP
Sbjct: 217 GGLYAFQQPGASYA----QMGRAAMITAAFGGTLPP 248
>gi|348522752|ref|XP_003448888.1| PREDICTED: polypyrimidine tract-binding protein 1-like [Oreochromis
niloticus]
Length = 654
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/214 (36%), Positives = 111/214 (51%), Gaps = 12/214 (5%)
Query: 80 HTDLSVKFQSHRSRDYTN-PYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQY 138
H + V+F +H+ N P A +A+ A S +D + P S VL +EN+ Y
Sbjct: 240 HHPVYVQFSNHKELKTDNSPNQERAQAALRALS--SSHVDTAAVAP-STVLRVVVENLIY 296
Query: 139 AVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCK 198
VTLD L +FS FG V +I +F KN QAL+QY D +A AK +L+G IY+G C
Sbjct: 297 PVTLDALCQIFSKFGTVLRIIIFTKNNQFQALLQYSDGASAQAAKLSLDGQNIYNGC-CT 355
Query: 199 LHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGA----TANQYNGA 254
L IS+S+ T L++K NN++SRD+T P P + QP++ A +A Y GA
Sbjct: 356 LRISFSKLTSLNVKYNNEKSRDFTRPDLPTGDGQPTMEHTAMATAFAAPGIISAAPYAGA 415
Query: 255 QFAPPPPEQPMMHQPTAAGWGAVPPASQSMPMMG 288
A PP QP A+P A S+ + G
Sbjct: 416 THAFPP---AFTLQPAGLAVPALPGALASLSLPG 446
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 58/89 (65%), Gaps = 7/89 (7%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCT 72
+ Q+FS FG V +I F K FQAL+Q+SD +A +AK +LDG++I G CT
Sbjct: 303 LCQIFSKFGTVLRIIIFTKNNQFQALLQYSDGASAQAAKLSLDGQNIYN-------GCCT 355
Query: 73 LRITYSAHTDLSVKFQSHRSRDYTNPYLP 101
LRI++S T L+VK+ + +SRD+T P LP
Sbjct: 356 LRISFSKLTSLNVKYNNEKSRDFTRPDLP 384
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 88/200 (44%), Gaps = 30/200 (15%)
Query: 11 IFILQVFSAFGFVHKITT-FEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMG 69
+FIL F +G V ++ F K ALVQ SD+ A A + L+G + +
Sbjct: 477 LFIL--FGVYGDVMRVKILFNKKE--NALVQMSDSTQAQLAMSHLNG---------QRLH 523
Query: 70 PCTLRITYSAHTDLSVKFQSHR----SRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPE 125
+RIT S HT + + + H ++DY+N P+ S S + P
Sbjct: 524 GKPVRITLSKHTSVQLPREGHEDQGLTKDYSNS--PLHRFKKPGSKNYS------NIFPP 575
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
S L + N+ +V D L M+F++ G V K F + ALIQ V+ A+ +
Sbjct: 576 SATL--HLSNIPPSVVEDDLKMLFASSGAVVKAFKFFQKDHKMALIQVGSVEEAI--ESL 631
Query: 186 LEGHCIYDGGFCKLHISYSR 205
+E H G L +S+S+
Sbjct: 632 IEFHNHDLGENHHLRVSFSK 651
>gi|270013160|gb|EFA09608.1| hypothetical protein TcasGA2_TC011728 [Tribolium castaneum]
Length = 876
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/102 (50%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VL IE+M Y ++LD+LH++F FG V KI F KN QALIQYPD +A AK+A
Sbjct: 482 NTVLRVIIEHMIYPISLDILHLIFQRFGKVLKIVTFTKNNSFQALIQYPDTASAQSAKQA 541
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
L+G IY+ C L I YS+ + L++K NND+SRDYT P+ P
Sbjct: 542 LDGQNIYNSC-CTLRIDYSKMSSLNVKYNNDKSRDYTNPNLP 582
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 59/97 (60%), Gaps = 11/97 (11%)
Query: 16 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 75
+F FG V KI TF K FQAL+Q+ DT +A SAK ALDG++I CTLRI
Sbjct: 504 IFQRFGKVLKIVTFTKNNSFQALIQYPDTASAQSAKQALDGQNIYN-------SCCTLRI 556
Query: 76 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQ 112
YS + L+VK+ + +SRDYTNP LP DA+ Q
Sbjct: 557 DYSKMSSLNVKYNNDKSRDYTNPNLPTG----DANDQ 589
>gi|189241313|ref|XP_966484.2| PREDICTED: similar to polypyrimidine tract binding protein
[Tribolium castaneum]
Length = 822
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/102 (50%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VL IE+M Y ++LD+LH++F FG V KI F KN QALIQYPD +A AK+A
Sbjct: 428 NTVLRVIIEHMIYPISLDILHLIFQRFGKVLKIVTFTKNNSFQALIQYPDTASAQSAKQA 487
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
L+G IY+ C L I YS+ + L++K NND+SRDYT P+ P
Sbjct: 488 LDGQNIYNSC-CTLRIDYSKMSSLNVKYNNDKSRDYTNPNLP 528
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 59/97 (60%), Gaps = 11/97 (11%)
Query: 16 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 75
+F FG V KI TF K FQAL+Q+ DT +A SAK ALDG++I CTLRI
Sbjct: 450 IFQRFGKVLKIVTFTKNNSFQALIQYPDTASAQSAKQALDGQNIYNSC-------CTLRI 502
Query: 76 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQ 112
YS + L+VK+ + +SRDYTNP LP DA+ Q
Sbjct: 503 DYSKMSSLNVKYNNDKSRDYTNPNLPTG----DANDQ 535
>gi|55669744|pdb|1SJR|A Chain A, Nmr Structure Of Rrm2 From Human Polypyrimidine Tract
Binding Protein Isoform 1 (Ptb1)
Length = 164
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 37 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 96
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 97 AQHAKLSLDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 152
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 56/91 (61%), Gaps = 7/91 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 65 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 117
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 105
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 118 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 148
>gi|131529|sp|P17225.2|PTBP1_MOUSE RecName: Full=Polypyrimidine tract-binding protein 1; Short=PTB;
AltName: Full=Heterogeneous nuclear ribonucleoprotein I;
Short=hnRNP I
gi|53553|emb|CAA36321.1| 25kDa nuclear protein [Mus musculus]
Length = 527
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 173 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 232
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 233 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 288
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 63/105 (60%), Gaps = 9/105 (8%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 201 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 253
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS--AIDASGQLSVGL 117
I +S T L+VK+ + +SRDYT P LP S ++D + + GL
Sbjct: 254 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGL 298
>gi|266862|sp|Q00438.1|PTBP1_RAT RecName: Full=Polypyrimidine tract-binding protein 1; Short=PTB;
AltName: Full=Heterogeneous nuclear ribonucleoprotein I;
Short=hnRNP I; AltName: Full=Pyrimidine-binding protein;
Short=PYBP
Length = 555
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 173 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 232
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 233 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 288
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 56/91 (61%), Gaps = 7/91 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 201 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 253
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 105
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 254 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 284
>gi|354504485|ref|XP_003514305.1| PREDICTED: polypyrimidine tract-binding protein 1-like [Cricetulus
griseus]
Length = 322
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 74/117 (63%), Gaps = 1/117 (0%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 129 GMAMAGQSPVLRILVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNRFQALLQYADPVS 188
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
A AK +L+G IY +C L I +S+ T L +K NND+SRDYT P P +SQPS+
Sbjct: 189 AQHAKLSLDGQNIYK-AWCSLRIDFSKLTSLYVKYNNDKSRDYTRPDLPSGDSQPSL 244
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 56/91 (61%), Gaps = 7/91 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I + C+LR
Sbjct: 157 QIFSKFGTVLKIITFTKNNRFQALLQYADPVSAQHAKLSLDGQNIYK-------AWCSLR 209
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 105
I +S T L VK+ + +SRDYT P LP S
Sbjct: 210 IDFSKLTSLYVKYNNDKSRDYTRPDLPSGDS 240
>gi|148699697|gb|EDL31644.1| mCG13402, isoform CRA_b [Mus musculus]
Length = 499
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 143 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 202
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 203 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 258
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 109/227 (48%), Gaps = 43/227 (18%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 171 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 223
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS--AIDASGQLSVGLDGKKLE--------- 123
I +S T L+VK+ + +SRDYT P LP S ++D + + GL +
Sbjct: 224 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGLSVPNVHGALAPLAIP 283
Query: 124 ------------------PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA-MFDKN 164
++VLL S N + VT L ++F +G VQ++ +F+K
Sbjct: 284 SAAAAAAASRIAIPGLAGAGNSVLLVSNLNPE-RVTPQSLFILFGVYGDVQRVKILFNKK 342
Query: 165 GGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 211
AL+Q D A +A L GH ++ + I+ S+H + +
Sbjct: 343 E--NALVQMADGSQAQLAMSHLNGHKLHGKS---VRITLSKHQSVQL 384
>gi|159163719|pdb|2ADB|A Chain A, Solution Structure Of Polypyrimidine Tract Binding Protein
Rbd2 Complexed With Cucucu Rna
Length = 148
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 24 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 83
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 84 AQHAKLSLDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 139
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 56/91 (61%), Gaps = 7/91 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 52 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 104
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 105
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 105 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 135
>gi|332255809|ref|XP_003277021.1| PREDICTED: polypyrimidine tract-binding protein 1 [Nomascus
leucogenys]
Length = 505
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 143 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 202
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 203 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 258
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 112/237 (47%), Gaps = 57/237 (24%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 171 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 223
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS--AID---------ASGQLSV-------- 115
I +S T L+VK+ + +SRDYT P LP S ++D + LSV
Sbjct: 224 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGKRTASLSVPNVHGALA 283
Query: 116 --------------------GLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPV 155
GL G ++VLL S N + VT L ++F +G V
Sbjct: 284 PLAIPSAAAAAAAAGRIAIPGLAG----AGNSVLLVSNLNPER-VTPQSLFILFGVYGDV 338
Query: 156 QKIA-MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 211
Q++ +F+K AL+Q D A +A L GH ++ + I+ S+H ++ +
Sbjct: 339 QRVKILFNKKE--NALVQMADGNQAQLAMSHLNGHKLHGK---PIRITLSKHQNVQL 390
>gi|149034648|gb|EDL89385.1| polypyrimidine tract binding protein 1, isoform CRA_b [Rattus
norvegicus]
Length = 490
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 133 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 192
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 193 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 248
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 109/228 (47%), Gaps = 44/228 (19%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 161 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 213
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS--AIDASGQLSVGLDGKKLE--------- 123
I +S T L+VK+ + +SRDYT P LP S ++D + + GL +
Sbjct: 214 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGLSVPNVHGALAPLAIP 273
Query: 124 -------------------PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA-MFDK 163
++VLL S N + VT L ++F +G VQ++ +F+K
Sbjct: 274 SAAAAAAAAGRIAIPGLAGAGNSVLLVSNLNPE-RVTPQSLFILFGVYGDVQRVKILFNK 332
Query: 164 NGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 211
AL+Q D A +A L GH ++ + I+ S+H + +
Sbjct: 333 KE--NALVQMADGSQAQLAMSHLNGHKLHGKS---VRITLSKHQSVQL 375
>gi|426386368|ref|XP_004059657.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 2
[Gorilla gorilla gorilla]
Length = 533
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 174 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 233
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 234 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 289
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 89/183 (48%), Gaps = 39/183 (21%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 202 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYNAC-------CTLR 254
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS--AIDASGQLSVGLDGKKLE--------- 123
I +S T L+VK+ + +SRDYT P LP S ++D + + GL +
Sbjct: 255 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGLSVPNVHGALAPLAIP 314
Query: 124 -------------------PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA-MFDK 163
++VLL S N + VT L ++F +G VQ++ +F +
Sbjct: 315 SAAAAAAAAGRIAIPGLAGAGNSVLLVSNLNPER-VTPQSLFILFGVYGDVQRVKILFSR 373
Query: 164 NGG 166
GG
Sbjct: 374 GGG 376
>gi|149034650|gb|EDL89387.1| polypyrimidine tract binding protein 1, isoform CRA_d [Rattus
norvegicus]
Length = 500
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 143 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 202
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 203 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 258
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 109/228 (47%), Gaps = 44/228 (19%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 171 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 223
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS--AIDASGQLSVGLDGKKLE--------- 123
I +S T L+VK+ + +SRDYT P LP S ++D + + GL +
Sbjct: 224 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGLSVPNVHGALAPLAIP 283
Query: 124 -------------------PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA-MFDK 163
++VLL S N + VT L ++F +G VQ++ +F+K
Sbjct: 284 SAAAAAAAAGRIAIPGLAGAGNSVLLVSNLNPE-RVTPQSLFILFGVYGDVQRVKILFNK 342
Query: 164 NGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 211
AL+Q D A +A L GH ++ + I+ S+H + +
Sbjct: 343 KE--NALVQMADGSQAQLAMSHLNGHKLHGKS---VRITLSKHQSVQL 385
>gi|148699701|gb|EDL31648.1| mCG13402, isoform CRA_e [Mus musculus]
Length = 454
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 189 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 248
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 249 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 304
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 109/246 (44%), Gaps = 62/246 (25%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 217 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 269
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS--AIDASGQLSVG---LDGKKLEPES-NV 128
I +S T L+VK+ + +SRDYT P LP S ++D + + L+G KL +S +
Sbjct: 270 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFAMSHLNGHKLHGKSVRI 329
Query: 129 LLASIENMQY-----------------------------------------------AVT 141
L+ +++Q +V+
Sbjct: 330 TLSKHQSVQLPREGQEDQGLTKDYGSSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVS 389
Query: 142 LDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHI 201
D L +FS+ G V K F + ALIQ V+ AV A L H + G L +
Sbjct: 390 EDDLKSLFSSNGGVVKGFKFFQKDRKMALIQMGSVEEAVQALIELHNHDL--GENHHLRV 447
Query: 202 SYSRHT 207
S+S+ T
Sbjct: 448 SFSKST 453
>gi|194212378|ref|XP_001915461.1| PREDICTED: LOW QUALITY PROTEIN: polypyrimidine tract-binding
protein 1 [Equus caballus]
Length = 596
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/140 (45%), Positives = 82/140 (58%), Gaps = 5/140 (3%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY + +
Sbjct: 221 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYAEPVS 280
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 238
A AK L+ IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 281 AQHAKLLLDAQNIYNAR-CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL--- 336
Query: 239 QPVPMVGATANQYNGAQFAP 258
M A A+ Y GA F P
Sbjct: 337 -DQTMAAAFASPYAGAGFPP 355
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 109/250 (43%), Gaps = 70/250 (28%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q+++ +A AK LD ++I CTLR
Sbjct: 249 QIFSKFGTVLKIITFTKNNQFQALLQYAEPVSAQHAKLLLDAQNIYN-------ARCTLR 301
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS-------------------------AIDA 109
I +S T L+VK+ + +SRDYT P LP S AI
Sbjct: 302 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFASPYAGAGFPPTFAIPQ 361
Query: 110 SGQLSV---------------------------GLDGKKLEPESNVLLASIENMQYAVTL 142
+ LSV GL G ++VLL S N + VT
Sbjct: 362 AAGLSVPNVHGALAPLAIPSAAAAAAAGRIALPGLAGAG----NSVLLVSNLNPER-VTP 416
Query: 143 DVLHMVFSAFGPVQKIA-MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHI 201
L ++F +G VQ++ +F+K AL+Q D A +A L GH ++ + I
Sbjct: 417 QSLFILFGVYGDVQRVKILFNKKE--NALVQMADGSQAQLAMSHLNGHKLHGK---PVRI 471
Query: 202 SYSRHTDLSI 211
+ S+H ++ +
Sbjct: 472 TLSKHQNVQL 481
>gi|26331660|dbj|BAC29560.1| unnamed protein product [Mus musculus]
gi|148699700|gb|EDL31647.1| mCG13402, isoform CRA_d [Mus musculus]
Length = 489
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 133 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 192
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 193 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 248
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 109/227 (48%), Gaps = 43/227 (18%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 161 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 213
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS--AIDASGQLSVGLDGKKLE--------- 123
I +S T L+VK+ + +SRDYT P LP S ++D + + GL +
Sbjct: 214 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGLSVPNVHGALAPLAIP 273
Query: 124 ------------------PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA-MFDKN 164
++VLL S N + VT L ++F +G VQ++ +F+K
Sbjct: 274 SAAAAAAASRIAIPGLAGAGNSVLLVSNLNPE-RVTPQSLFILFGVYGDVQRVKILFNKK 332
Query: 165 GGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 211
AL+Q D A +A L GH ++ + I+ S+H + +
Sbjct: 333 E--NALVQMADGSQAQLAMSHLNGHKLHGKS---VRITLSKHQSVQL 374
>gi|26353062|dbj|BAC40161.1| unnamed protein product [Mus musculus]
Length = 299
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 173 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 232
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 233 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 288
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 56/91 (61%), Gaps = 7/91 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 201 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 253
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 105
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 254 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 284
>gi|320170468|gb|EFW47367.1| polypyrimidine tract-binding protein PTB-2 [Capsaspora owczarzaki
ATCC 30864]
Length = 546
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/125 (47%), Positives = 78/125 (62%), Gaps = 3/125 (2%)
Query: 109 ASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQ 168
ASG S G + EP+ VL I N+ Y VTLDVLH +FS FG V +I F+KN Q
Sbjct: 158 ASGSHS-GNNDSSFEPKP-VLRVEIHNVLYVVTLDVLHQIFSKFGNVLRIITFNKNNLFQ 215
Query: 169 ALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 228
A IQY D+ +A AK +L+G IY G C+L I YSR +L+++ NND+ RDYT P+ P
Sbjct: 216 AFIQYADLNSAKNAKSSLDGQSIYTGC-CQLRIFYSRLDELNVRFNNDKCRDYTNPNLPT 274
Query: 229 VNSQP 233
++ P
Sbjct: 275 GDNTP 279
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 64/106 (60%), Gaps = 13/106 (12%)
Query: 2 CLTLSLLKVIFIL------QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALD 55
L + + V++++ Q+FS FG V +I TF K FQA +Q++D +A +AK++LD
Sbjct: 175 VLRVEIHNVLYVVTLDVLHQIFSKFGNVLRIITFNKNNLFQAFIQYADLNSAKNAKSSLD 234
Query: 56 GRSIPRYLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLP 101
G+SI G C LRI YS +L+V+F + + RDYTNP LP
Sbjct: 235 GQSIY-------TGCCQLRIFYSRLDELNVRFNNDKCRDYTNPNLP 273
>gi|402765974|ref|NP_071961.2| polypyrimidine tract-binding protein 1 isoform b [Rattus
norvegicus]
gi|149034649|gb|EDL89386.1| polypyrimidine tract binding protein 1, isoform CRA_c [Rattus
norvegicus]
Length = 530
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 173 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 232
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 233 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 288
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 109/228 (47%), Gaps = 44/228 (19%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 201 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 253
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS--AIDASGQLSVGLDGKKLE--------- 123
I +S T L+VK+ + +SRDYT P LP S ++D + + GL +
Sbjct: 254 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGLSVPNVHGALAPLAIP 313
Query: 124 -------------------PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA-MFDK 163
++VLL S N + VT L ++F +G VQ++ +F+K
Sbjct: 314 SAAAAAAAAGRIAIPGLAGAGNSVLLVSNLNPER-VTPQSLFILFGVYGDVQRVKILFNK 372
Query: 164 NGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 211
AL+Q D A +A L GH ++ + I+ S+H + +
Sbjct: 373 KE--NALVQMADGSQAQLAMSHLNGHKLHGKS---VRITLSKHQSVQL 415
>gi|57002|emb|CAA43202.1| pyrimidine binding protein 1 [Rattus norvegicus]
Length = 530
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 173 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 232
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 233 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 288
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 109/228 (47%), Gaps = 44/228 (19%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 201 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 253
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS--AIDASGQLSVGLDGKKLE--------- 123
I +S T L+VK+ + +SRDYT P LP S ++D + + GL +
Sbjct: 254 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGLSVPNVHGALAPLAIP 313
Query: 124 -------------------PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA-MFDK 163
++VLL S N + VT L ++F +G VQ++ +F+K
Sbjct: 314 SAAAAAAAAGRIAIPGLAGAGNSVLLVSNLNPER-VTPQSLFILFGVYGDVQRVKILFNK 372
Query: 164 NGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 211
AL++ D A +A L GH ++ + I+ S+H + +
Sbjct: 373 KE--NALVEMADGSQAQLAMSHLNGHKLHGKS---VRITLSKHQSVQL 415
>gi|74196849|dbj|BAE43140.1| unnamed protein product [Mus musculus]
Length = 530
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 173 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 232
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 233 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 288
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 109/228 (47%), Gaps = 44/228 (19%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 201 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 253
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS--AIDASGQLSVGLDGKKLE--------- 123
I +S T L+VK+ + +SRDYT P LP S ++D + + GL +
Sbjct: 254 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGLSVPNVHGALAPLAIP 313
Query: 124 -------------------PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA-MFDK 163
++VLL S N + VT L ++F +G VQ++ +F+K
Sbjct: 314 SAAAAAAAASRIAIPGLAGAGNSVLLVSNLNPER-VTPQSLFILFGVYGDVQRVKILFNK 372
Query: 164 NGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 211
AL+Q D A +A L GH ++ + I+ S+H + +
Sbjct: 373 KE--NALVQMADGSQAQLAMSHLNGHKLHGKS---VRITLSKHQSVQL 415
>gi|116517303|ref|NP_032982.2| polypyrimidine tract-binding protein 1 isoform 2 [Mus musculus]
gi|26336949|dbj|BAC32158.1| unnamed protein product [Mus musculus]
gi|26342100|dbj|BAC34712.1| unnamed protein product [Mus musculus]
gi|26349809|dbj|BAC38544.1| unnamed protein product [Mus musculus]
gi|74211646|dbj|BAE29183.1| unnamed protein product [Mus musculus]
gi|74212275|dbj|BAE40295.1| unnamed protein product [Mus musculus]
gi|148699696|gb|EDL31643.1| mCG13402, isoform CRA_a [Mus musculus]
gi|148699698|gb|EDL31645.1| mCG13402, isoform CRA_a [Mus musculus]
Length = 529
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 173 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 232
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 233 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 288
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 109/227 (48%), Gaps = 43/227 (18%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 201 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 253
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS--AIDASGQLSVGLDGKKLE--------- 123
I +S T L+VK+ + +SRDYT P LP S ++D + + GL +
Sbjct: 254 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGLSVPNVHGALAPLAIP 313
Query: 124 ------------------PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA-MFDKN 164
++VLL S N + VT L ++F +G VQ++ +F+K
Sbjct: 314 SAAAAAAASRIAIPGLAGAGNSVLLVSNLNPER-VTPQSLFILFGVYGDVQRVKILFNKK 372
Query: 165 GGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 211
AL+Q D A +A L GH ++ + I+ S+H + +
Sbjct: 373 E--NALVQMADGSQAQLAMSHLNGHKLHGKS---VRITLSKHQSVQL 414
>gi|359493141|ref|XP_002264689.2| PREDICTED: polypyrimidine tract-binding protein homolog 3 isoform 1
[Vitis vinifera]
Length = 445
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 113/222 (50%), Gaps = 50/222 (22%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKN-------ALDGRSIPRYLLP 65
+LQ+F FG + K+ A QAL+Q D +A++A ++ GR++
Sbjct: 22 LLQLFQPFGVITKLVMLR--AKNQALLQMQDVPSAANAMQFYTNVQPSIRGRNV------ 73
Query: 66 ENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPE 125
+ +S+H +L+ Q+ + R G ++ P
Sbjct: 74 --------YVQFSSHQELTTVDQNAQGR-------------------------GDEVSP- 99
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ +LL +I ++ Y +T++VLH VFS G V+KI F K+ G QALIQY Q+AV A+ +
Sbjct: 100 NRILLVTIHHLLYPITVEVLHQVFSPHGFVEKIVTFQKSAGFQALIQYQSRQSAVAARNS 159
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
L+G IYD G C+L I +S +L + NN+RSRD+T PS P
Sbjct: 160 LQGRNIYD-GCCQLDIQFSNLDELQVNYNNERSRDFTNPSLP 200
>gi|27806103|ref|NP_776867.1| polypyrimidine tract-binding protein 1 [Bos taurus]
gi|426229471|ref|XP_004008814.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 2 [Ovis
aries]
gi|75073578|sp|Q8WN55.1|PTBP1_BOVIN RecName: Full=Polypyrimidine tract-binding protein 1; Short=PTB
gi|17298537|gb|AAL38169.1|AF445640_1 polypyrimidine-tract binding protein [Bos taurus]
gi|296485353|tpg|DAA27468.1| TPA: polypyrimidine tract-binding protein 1 [Bos taurus]
Length = 531
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 174 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 233
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 234 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 289
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 109/228 (47%), Gaps = 44/228 (19%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 202 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 254
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS--AIDASGQLSVGLDGKKLE--------- 123
I +S T L+VK+ + +SRDYT P LP S ++D + + GL +
Sbjct: 255 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGLSVPNVHGALAPLAIP 314
Query: 124 -------------------PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKI-AMFDK 163
++VLL S N + VT L ++F +G VQ++ +F+K
Sbjct: 315 SAAAAAAAAGRIAIPGLAGAGNSVLLVSNLNPE-RVTPQSLFILFGVYGDVQRVKVLFNK 373
Query: 164 NGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 211
AL+Q D A +A L GH ++ + I+ S+H + +
Sbjct: 374 KE--NALVQMADGSQAQLAMSHLNGHKLHGK---PVRITLSKHQSVQL 416
>gi|73987401|ref|XP_868641.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 8 [Canis
lupus familiaris]
Length = 531
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 174 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 233
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 234 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 289
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 110/228 (48%), Gaps = 44/228 (19%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 202 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 254
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS--AIDASGQLSVGLDGKKLE--------- 123
I +S T L+VK+ + +SRDYT P LP S ++D + + GL +
Sbjct: 255 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGLSVPNVHGALAPLAIP 314
Query: 124 -------------------PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA-MFDK 163
++VLL S N + VT L ++F +G VQ++ +F+K
Sbjct: 315 SAAAAAAAAGRIAIPGLAGAGNSVLLVSNLNPE-RVTPQSLFILFGVYGDVQRVKILFNK 373
Query: 164 NGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 211
AL+Q D A +A L GH ++ + I+ S+H ++ +
Sbjct: 374 KE--NALVQMADGSQAQLAMSHLNGHKLHGK---PVRITLSKHQNVQL 416
>gi|14165466|ref|NP_114368.1| polypyrimidine tract-binding protein 1 isoform c [Homo sapiens]
gi|332850814|ref|XP_003316017.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 2 [Pan
troglodytes]
gi|131528|sp|P26599.1|PTBP1_HUMAN RecName: Full=Polypyrimidine tract-binding protein 1; Short=PTB;
AltName: Full=57 kDa RNA-binding protein PPTB-1;
AltName: Full=Heterogeneous nuclear ribonucleoprotein I;
Short=hnRNP I
gi|35768|emb|CAA43973.1| polypirimidine tract binding protein [Homo sapiens]
gi|35774|emb|CAA43056.1| polypyrimidine tract-binding protein (pPTB) [Homo sapiens]
gi|4096061|gb|AAC99798.1| PTB_HUMAN [Homo sapiens]
gi|13325140|gb|AAH04383.1| Polypyrimidine tract binding protein 1 [Homo sapiens]
gi|119581559|gb|EAW61155.1| polypyrimidine tract binding protein 1, isoform CRA_d [Homo
sapiens]
gi|261860774|dbj|BAI46909.1| polypyrimidine tract binding protein 1 [synthetic construct]
gi|410218530|gb|JAA06484.1| polypyrimidine tract binding protein 1 [Pan troglodytes]
gi|410301206|gb|JAA29203.1| polypyrimidine tract binding protein 1 [Pan troglodytes]
Length = 531
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 174 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 233
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 234 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 289
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 110/228 (48%), Gaps = 44/228 (19%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 202 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 254
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS--AIDASGQLSVGLDGKKLE--------- 123
I +S T L+VK+ + +SRDYT P LP S ++D + + GL +
Sbjct: 255 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGLSVPNVHGALAPLAIP 314
Query: 124 -------------------PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA-MFDK 163
++VLL S N + VT L ++F +G VQ++ +F+K
Sbjct: 315 SAAAAAAAAGRIAIPGLAGAGNSVLLVSNLNPE-RVTPQSLFILFGVYGDVQRVKILFNK 373
Query: 164 NGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 211
AL+Q D A +A L GH ++ + I+ S+H ++ +
Sbjct: 374 KE--NALVQMADGNQAQLAMSHLNGHKLHGK---PIRITLSKHQNVQL 416
>gi|62087400|dbj|BAD92147.1| polypyrimidine tract-binding protein 1 isoform c variant [Homo
sapiens]
Length = 329
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 191 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 250
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 251 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 306
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 56/91 (61%), Gaps = 7/91 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 219 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 271
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 105
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 272 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 302
>gi|402903488|ref|XP_003914597.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 2 [Papio
anubis]
gi|380814966|gb|AFE79357.1| polypyrimidine tract-binding protein 1 isoform c [Macaca mulatta]
gi|384948418|gb|AFI37814.1| polypyrimidine tract-binding protein 1 isoform c [Macaca mulatta]
Length = 530
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 173 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 232
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 233 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 288
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 110/228 (48%), Gaps = 44/228 (19%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 201 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 253
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS--AIDASGQLSVGLDGKKLE--------- 123
I +S T L+VK+ + +SRDYT P LP S ++D + + GL +
Sbjct: 254 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGLSVPNVHGALAPLAIP 313
Query: 124 -------------------PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA-MFDK 163
++VLL S N + VT L ++F +G VQ++ +F+K
Sbjct: 314 SAAAAAAAAGRIAIPGLAGAGNSVLLVSNLNPE-RVTPQSLFILFGVYGDVQRVKILFNK 372
Query: 164 NGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 211
AL+Q D A +A L GH ++ + I+ S+H ++ +
Sbjct: 373 KE--NALVQMADGNQAQLAMSHLNGHKLHGK---PIRITLSKHQNVQL 415
>gi|344251032|gb|EGW07136.1| Polypyrimidine tract-binding protein 1 [Cricetulus griseus]
Length = 323
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 74/117 (63%), Gaps = 1/117 (0%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 169 GMAMAGQSPVLRILVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNRFQALLQYADPVS 228
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
A AK +L+G IY +C L I +S+ T L +K NND+SRDYT P P +SQPS+
Sbjct: 229 AQHAKLSLDGQNIYK-AWCSLRIDFSKLTSLYVKYNNDKSRDYTRPDLPSGDSQPSL 284
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 63/105 (60%), Gaps = 9/105 (8%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I + C+LR
Sbjct: 197 QIFSKFGTVLKIITFTKNNRFQALLQYADPVSAQHAKLSLDGQNIYK-------AWCSLR 249
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS--AIDASGQLSVGL 117
I +S T L VK+ + +SRDYT P LP S ++D + + GL
Sbjct: 250 IDFSKLTSLYVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGL 294
>gi|119581562|gb|EAW61158.1| polypyrimidine tract binding protein 1, isoform CRA_g [Homo
sapiens]
Length = 501
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 144 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 203
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 204 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 259
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 110/228 (48%), Gaps = 44/228 (19%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 172 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 224
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS--AIDASGQLSVGLDGKKLE--------- 123
I +S T L+VK+ + +SRDYT P LP S ++D + + GL +
Sbjct: 225 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGLSVPNVHGALAPLAIP 284
Query: 124 -------------------PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA-MFDK 163
++VLL S N + VT L ++F +G VQ++ +F+K
Sbjct: 285 SAAAAAAAAGRIAIPGLAGAGNSVLLVSNLNPE-RVTPQSLFILFGVYGDVQRVKILFNK 343
Query: 164 NGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 211
AL+Q D A +A L GH ++ + I+ S+H ++ +
Sbjct: 344 KE--NALVQMADGNQAQLAMSHLNGHKLHGK---PIRITLSKHQNVQL 386
>gi|348550212|ref|XP_003460926.1| PREDICTED: polypyrimidine tract-binding protein 1-like isoform 2
[Cavia porcellus]
Length = 531
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 174 GLAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNSQFQALLQYADPVS 233
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 234 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 289
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 116/232 (50%), Gaps = 52/232 (22%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K + FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 202 QIFSKFGTVLKIITFTKNSQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 254
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLP--------------------------VAPSAI- 107
I +S T L+VK+ + +SRDYT P LP +AP AI
Sbjct: 255 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGLSVPNVHGALAPLAIP 314
Query: 108 ------DASGQLSV-GLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA- 159
A+G++ + GL G ++VLL S N + VT L ++F +G VQ++
Sbjct: 315 SAAAAAAAAGRIGIPGLAG----AGNSVLLVSNLNPER-VTPQSLFILFGVYGDVQRVKI 369
Query: 160 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 211
+F+K AL+Q D A +A L GH ++ + I+ S+H ++ +
Sbjct: 370 LFNKKE--NALVQMADGSQAQLAMSHLNGHKLHGK---PIRITLSKHQNVQL 416
>gi|296081200|emb|CBI18226.3| unnamed protein product [Vitis vinifera]
Length = 443
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 114/215 (53%), Gaps = 38/215 (17%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCT 72
+LQ+F FG + K+ A QAL+Q D +A++A N+ P +
Sbjct: 22 LLQLFQPFGVITKLVMLR--AKNQALLQMQDVPSAANAMQ-----------FYTNVQP-S 67
Query: 73 LRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLAS 132
+R ++ V+F SH+ + +D + Q G+ EP + +LL +
Sbjct: 68 IR-----GRNVYVQFSSHQE-----------LTTVDQNAQ------GRGDEP-NRILLVT 104
Query: 133 IENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 192
I ++ Y +T++VLH VFS G V+KI F K+ G QALIQY Q+AV A+ +L+G IY
Sbjct: 105 IHHLLYPITVEVLHQVFSPHGFVEKIVTFQKSAGFQALIQYQSRQSAVAARNSLQGRNIY 164
Query: 193 DGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
D G C+L I +S +L + NN+RSRD+T PS P
Sbjct: 165 D-GCCQLDIQFSNLDELQVNYNNERSRDFTNPSLP 198
>gi|58331982|ref|NP_001011140.1| polypyrimidine tract binding protein 1 [Xenopus (Silurana)
tropicalis]
gi|54261503|gb|AAH84469.1| polypyrimidine tract binding protein 1 [Xenopus (Silurana)
tropicalis]
gi|89272472|emb|CAJ82472.1| polypyrimidine tract binding protein 1 [Xenopus (Silurana)
tropicalis]
Length = 554
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/144 (45%), Positives = 84/144 (58%), Gaps = 7/144 (4%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVL +FS FG V KI F KN QAL+QY D +
Sbjct: 177 GMAMSGQSPVLRIIVENLFYPVTLDVLQQIFSKFGTVLKIITFTKNNQFQALLQYGDPVS 236
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 238
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P + QPS+
Sbjct: 237 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDGQPSL--D 293
Query: 239 QPVPMVGA----TANQYNGAQFAP 258
Q + GA +AN Y A F P
Sbjct: 294 QTIAAFGAPGLISANPYASAGFPP 317
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 60/99 (60%), Gaps = 12/99 (12%)
Query: 3 LTLSLLKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRY 62
+TL +L+ Q+FS FG V KI TF K FQAL+Q+ D +A AK +LDG++I
Sbjct: 198 VTLDVLQ-----QIFSKFGTVLKIITFTKNNQFQALLQYGDPVSAQHAKLSLDGQNIYN- 251
Query: 63 LLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLP 101
CTLRI +S T L+VK+ + +SRDYT P LP
Sbjct: 252 ------ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLP 284
>gi|363814551|ref|NP_001242751.1| uncharacterized protein LOC100819672 [Glycine max]
gi|255639782|gb|ACU20184.1| unknown [Glycine max]
Length = 431
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/219 (34%), Positives = 108/219 (49%), Gaps = 47/219 (21%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPC- 71
+LQ+F FG + K+ A QAL+Q D SA NAL N+ P
Sbjct: 22 LLQLFQPFGVITKLVMLR--AKNQALIQMQDV---PSAVNALQ--------FYANVQPSI 68
Query: 72 ---TLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNV 128
+ + +S+H +L+ QS G+ EP + +
Sbjct: 69 RGRNVYVQFSSHQELTTMEQSQ----------------------------GRGDEP-NRI 99
Query: 129 LLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEG 188
LL ++ +M Y +T+DVL+ VFS G V+KI F K+ G QALIQY Q+AV A+ L+G
Sbjct: 100 LLVTVHHMLYPMTVDVLYQVFSPHGSVEKIVTFQKSAGFQALIQYQSRQSAVAARSTLQG 159
Query: 189 HCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
IYDG C+L I +S +L + NNDRSRD+T P+ P
Sbjct: 160 RNIYDGC-CQLDIQFSNLDELQVNYNNDRSRDFTNPNLP 197
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 115/237 (48%), Gaps = 47/237 (19%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + QVFS G V KI TF+K+AGFQAL+Q+ ++A +A++ L GR+I
Sbjct: 111 MTVDVLYQVFSPHGSVEKIVTFQKSAGFQALIQYQSRQSAVAARSTLQGRNIYD------ 164
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVA----PS-----------AIDASGQ 112
G C L I +S +L V + + RSRD+TNP LP PS A SG
Sbjct: 165 -GCCQLDIQFSNLDELQVNYNNDRSRDFTNPNLPTEQKGRPSQPGYGDAGNMYAAQGSGA 223
Query: 113 LSVGL------------DGKKLEP-------ESNVLLASIENMQYAVTLDVLHMVFSAFG 153
+VG G L P VL++++ + + D L +FS +G
Sbjct: 224 RAVGFPQMANAAAIAAAFGGGLPPGITGTNDRCTVLVSNLNPDR--IDEDKLFNLFSIYG 281
Query: 154 PVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLS 210
+ +I + +N ALIQ D A +A L+G +++ +L +++S+H +++
Sbjct: 282 NIVRIKLL-RNKPDHALIQMGDGFQAELAVHFLKGAMLFEK---RLEVNFSKHPNIT 334
>gi|359493143|ref|XP_002264763.2| PREDICTED: polypyrimidine tract-binding protein homolog 3 isoform 2
[Vitis vinifera]
Length = 432
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 114/215 (53%), Gaps = 38/215 (17%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCT 72
+LQ+F FG + K+ A QAL+Q D +A++A N+ P +
Sbjct: 22 LLQLFQPFGVITKLVMLR--AKNQALLQMQDVPSAANAMQ-----------FYTNVQP-S 67
Query: 73 LRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLAS 132
+R ++ V+F SH+ + +D + Q G+ EP + +LL +
Sbjct: 68 IR-----GRNVYVQFSSHQE-----------LTTVDQNAQ------GRGDEP-NRILLVT 104
Query: 133 IENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 192
I ++ Y +T++VLH VFS G V+KI F K+ G QALIQY Q+AV A+ +L+G IY
Sbjct: 105 IHHLLYPITVEVLHQVFSPHGFVEKIVTFQKSAGFQALIQYQSRQSAVAARNSLQGRNIY 164
Query: 193 DGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
DG C+L I +S +L + NN+RSRD+T PS P
Sbjct: 165 DGC-CQLDIQFSNLDELQVNYNNERSRDFTNPSLP 198
>gi|19911240|dbj|BAB86943.1| polypirimidine tract binding protein [Mus musculus]
Length = 528
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 57/117 (48%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 173 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 232
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
A AK +L+G IY+ C L + +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 233 AQHAKLSLDGQNIYN-ACCTLRVDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 288
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 109/227 (48%), Gaps = 43/227 (18%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 201 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 253
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS--AIDASGQLSVGLDGKKLE--------- 123
+ +S T L+VK+ + +SRDYT P LP S ++D + + GL +
Sbjct: 254 VDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGLSVPNVHGALAPLAIP 313
Query: 124 ------------------PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA-MFDKN 164
++VLL S N + VT L ++F +G VQ++ +F+K
Sbjct: 314 SAAAAAAASRIAIPGLAGAGNSVLLVSNLNPER-VTPQSLFILFGVYGDVQRVKILFNKK 372
Query: 165 GGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 211
AL+Q D A +A L GH ++ + I+ S+H + +
Sbjct: 373 E--NALVQMADGSQAQLAMSHLNGHKLHGKS---VRITLSKHQSVQL 414
>gi|356535770|ref|XP_003536416.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
[Glycine max]
Length = 443
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/219 (34%), Positives = 108/219 (49%), Gaps = 47/219 (21%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPC- 71
+LQ+F FG + K+ A QAL+Q D SA NAL N+ P
Sbjct: 22 LLQLFQPFGVITKLVMLR--AKNQALIQMQD---VPSAVNALQ--------FYANVQPSI 68
Query: 72 ---TLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNV 128
+ + +S+H +L+ QS G+ EP + +
Sbjct: 69 RGRNVYVQFSSHQELTTMDQSQ----------------------------GRGDEP-NRI 99
Query: 129 LLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEG 188
LL ++ +M Y +T+DVL+ VFS G V+KI F K+ G QALIQY Q+AV A+ L+G
Sbjct: 100 LLVTVHHMLYPMTVDVLYQVFSPHGSVEKIVTFQKSAGFQALIQYQSRQSAVAARSTLQG 159
Query: 189 HCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
IYDG C+L I +S +L + NNDRSRD+T P+ P
Sbjct: 160 RNIYDGC-CQLDIQFSNLDELQVNYNNDRSRDFTNPNLP 197
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 111/233 (47%), Gaps = 47/233 (20%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + QVFS G V KI TF+K+AGFQAL+Q+ ++A +A++ L GR+I
Sbjct: 111 MTVDVLYQVFSPHGSVEKIVTFQKSAGFQALIQYQSRQSAVAARSTLQGRNIYD------ 164
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVA----PS-----------AIDASGQ 112
G C L I +S +L V + + RSRD+TNP LP PS A SG
Sbjct: 165 -GCCQLDIQFSNLDELQVNYNNDRSRDFTNPNLPTEQKGRPSQPGYGDAGNMYAAQGSGA 223
Query: 113 LSVGL------------DGKKLEP-------ESNVLLASIENMQYAVTLDVLHMVFSAFG 153
+VG G L P VL++++ + + D L +FS +G
Sbjct: 224 RAVGFPQMANAAAIAAAFGGGLPPGITGTNDRCTVLVSNLNPDR--IDEDKLFNLFSIYG 281
Query: 154 PVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRH 206
+ +I + +N ALIQ D A +A L G +++ +L +++S+H
Sbjct: 282 NIMRIKLL-RNKPDHALIQMGDGFQAKLAVHFLRGAMLFEK---RLEVNFSKH 330
>gi|413933762|gb|AFW68313.1| hypothetical protein ZEAMMB73_143783 [Zea mays]
Length = 251
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 104/222 (46%), Gaps = 47/222 (21%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKN-------ALDGRSIPRYLLP 65
+LQ+ FG V KI Q L+Q D + SA ++ GR++
Sbjct: 22 LLQLLQPFGVVSKIVMLRAKNQAQTLLQMEDIHASVSALQYYTSVQPSIRGRNV------ 75
Query: 66 ENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPE 125
+ +S+H +L+ SH G + +
Sbjct: 76 --------YMQFSSHQELTTDQSSH-------------------------GRNSDQESEP 102
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ +LL +I +M Y +T++VLH VF A+G V+KI F K+ G QALIQ+ Q AV A +
Sbjct: 103 NRILLVTIHHMIYPITVEVLHQVFKAYGFVEKIVTFQKSAGFQALIQFHSRQEAVEAFGS 162
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
L G IYDG C+L I YS ++L + NNDRSRD+T PS P
Sbjct: 163 LHGRNIYDGC-CQLDIQYSNLSELQVHYNNDRSRDFTNPSLP 203
>gi|413949172|gb|AFW81821.1| hypothetical protein ZEAMMB73_476847 [Zea mays]
Length = 339
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 106/222 (47%), Gaps = 49/222 (22%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKN-------ALDGRSIPRYLLP 65
+LQ+ FG V KI A QAL+Q D + SA ++ GR++
Sbjct: 107 LLQLLQPFGMVSKIVMLR--AKNQALLQMEDLHASVSALQYYTSVQPSIRGRNV------ 158
Query: 66 ENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPE 125
+ +S+H +L+ SH G + +
Sbjct: 159 --------YMQFSSHQELTTDQSSH-------------------------GRNSDQGSEP 185
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ +LL +I +M Y +T+++LH VF A+G V+KI F K+ G QALIQY Q AV A +
Sbjct: 186 NRILLVTIHHMIYPITVEILHQVFKAYGFVEKIVTFQKSAGFQALIQYHSRQEAVEAFGS 245
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
L G IYDG C+L I YS ++L + NNDRSRD+T PS P
Sbjct: 246 LHGRNIYDGC-CQLDIQYSNLSELQVHYNNDRSRDFTNPSLP 286
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 7/95 (7%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + QVF A+GFV KI TF+K+AGFQAL+Q+ + A A +L GR+I
Sbjct: 200 ITVEILHQVFKAYGFVEKIVTFQKSAGFQALIQYHSRQEAVEAFGSLHGRNIYD------ 253
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPV 102
G C L I YS ++L V + + RSRD+TNP LP
Sbjct: 254 -GCCQLDIQYSNLSELQVHYNNDRSRDFTNPSLPT 287
>gi|300681488|emb|CBH32582.1| RNA recognition domain containing protein,expressed [Triticum
aestivum]
Length = 439
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/248 (34%), Positives = 117/248 (47%), Gaps = 50/248 (20%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRY--LLPENMGP 70
+LQV FG V K+ QALVQ D + SA I Y + P G
Sbjct: 22 LLQVVQPFGAVAKLVMLRTKN--QALVQMEDLSASISA--------IQYYTTIQPSVRGR 71
Query: 71 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLL 130
+ + YS+H +L+ SH G + + EP + +LL
Sbjct: 72 -NVYLQYSSHQELTTDQSSH-------------------------GRNPDQDEP-NRILL 104
Query: 131 ASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHC 190
++ +M Y +T++VLH VFS +G V+KI F K G QALIQ+ Q+A+ A AL G
Sbjct: 105 VTVHHMLYPMTVEVLHQVFSPYGFVEKIVTFQKTAGFQALIQFQSRQSAIQAAGALHGRN 164
Query: 191 IYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVN---------SQPSILG-QQP 240
IYDG C+L I YS ++L + NNDRSRD+T PS P + PS+ G QQP
Sbjct: 165 IYDGC-CQLDIQYSNLSELQVHYNNDRSRDFTNPSLPTEQRPRSSQLGYNDPSLFGFQQP 223
Query: 241 VPMVGATA 248
G A
Sbjct: 224 GAAYGQAA 231
>gi|224087659|ref|XP_002196400.1| PREDICTED: polypyrimidine tract-binding protein 1 [Taeniopygia
guttata]
Length = 525
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 65/137 (47%), Positives = 82/137 (59%), Gaps = 5/137 (3%)
Query: 125 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 184
+S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +A AK
Sbjct: 150 QSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNHQFQALLQYADPMSAQHAKL 209
Query: 185 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMV 244
+L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQP+ L Q
Sbjct: 210 SLDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPT-LDQTMAAAF 267
Query: 245 GA---TANQYNGAQFAP 258
GA + Y GA F P
Sbjct: 268 GAPGIISPPYAGAGFPP 284
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 56/91 (61%), Gaps = 7/91 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 172 QIFSKFGTVLKIITFTKNHQFQALLQYADPMSAQHAKLSLDGQNIYN-------ACCTLR 224
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 105
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 225 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 255
>gi|296082547|emb|CBI21552.3| unnamed protein product [Vitis vinifera]
Length = 374
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 77/215 (35%), Positives = 108/215 (50%), Gaps = 34/215 (15%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCT 72
+LQ+ FG V K+ A QAL+Q D +A SA + Y N+ P
Sbjct: 22 LLQLVHPFGVVTKLVMLR--AKNQALLQMQDVASAVSA--------LQYY---ANVQPSV 68
Query: 73 LRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLAS 132
++ V+F SH+ + Q S G G + + +LL +
Sbjct: 69 ------RGRNVYVQFSSHQE--------------LTTMDQNSQGRKGDQDAQPNRILLVT 108
Query: 133 IENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 192
I ++ Y +T++VLH VFS G V+KI F K+ G QALIQY Q+AV A AL+G IY
Sbjct: 109 IHHLLYPITVEVLHQVFSPHGFVEKIVTFQKSAGFQALIQYQSRQSAVSAINALQGRNIY 168
Query: 193 DGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
D G C+L I +S T+L + NN+RSRD+T PS P
Sbjct: 169 D-GCCQLDIQFSNLTELQVNYNNERSRDFTNPSLP 202
>gi|16307418|gb|AAH10255.1| Polypyrimidine tract binding protein 2 [Mus musculus]
Length = 531
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 90/169 (53%), Gaps = 14/169 (8%)
Query: 73 LRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEP------ES 126
+ I YS H +L ++ + N V A+ A + L G + +S
Sbjct: 126 IYIQYSNHKEL-------KTDNTLNQRAQVVLQAVTAVQTANTPLSGTTVSESAVTPAQS 178
Query: 127 NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEAL 186
VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK AL
Sbjct: 179 PVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLAL 238
Query: 187 EGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 239 DGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 286
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 102/223 (45%), Gaps = 46/223 (20%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 199 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 251
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS-----------GQLS--- 114
I +S +L+VK+ + +SRDYT P LP AI A+ G LS
Sbjct: 252 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGALSPLA 311
Query: 115 ---------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA 159
VG+ G + +L++++ + VT L +F +G VQ++
Sbjct: 312 IPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDVQRVK 369
Query: 160 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 202
+ N ALIQ D + +A L G +Y G ++ +S
Sbjct: 370 IL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLS 410
>gi|53850638|ref|NP_001005555.1| polypyrimidine tract-binding protein 2 [Rattus norvegicus]
gi|81910658|sp|Q66H20.1|PTBP2_RAT RecName: Full=Polypyrimidine tract-binding protein 2; AltName:
Full=Neural polypyrimidine tract-binding protein;
AltName: Full=PTB-like protein
gi|93140675|sp|Q91Z31.2|PTBP2_MOUSE RecName: Full=Polypyrimidine tract-binding protein 2; AltName:
Full=Brain-enriched polypyrimidine tract-binding
protein; Short=Brain-enriched PTB; AltName: Full=Neural
polypyrimidine tract-binding protein; AltName:
Full=RRM-type RNA-binding protein brPTB
gi|51859313|gb|AAH82076.1| Polypyrimidine tract binding protein 2 [Rattus norvegicus]
gi|149025819|gb|EDL82062.1| polypyrimidine tract binding protein 2, isoform CRA_b [Rattus
norvegicus]
Length = 531
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 90/169 (53%), Gaps = 14/169 (8%)
Query: 73 LRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEP------ES 126
+ I YS H +L ++ + N V A+ A + L G + +S
Sbjct: 126 IYIQYSNHKEL-------KTDNTLNQRAQVVLQAVTAVQTANTPLSGTTVSESAVTPAQS 178
Query: 127 NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEAL 186
VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK AL
Sbjct: 179 PVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLAL 238
Query: 187 EGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 239 DGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 286
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 102/223 (45%), Gaps = 46/223 (20%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 199 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 251
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS-----------GQLS--- 114
I +S +L+VK+ + +SRDYT P LP AI A+ G LS
Sbjct: 252 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGALSPLA 311
Query: 115 ---------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA 159
VG+ G + +L++++ + VT L +F +G VQ++
Sbjct: 312 IPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDVQRVK 369
Query: 160 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 202
+ N ALIQ D + +A L G +Y G ++ +S
Sbjct: 370 IL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLS 410
>gi|9507003|ref|NP_062423.1| polypyrimidine tract-binding protein 2 [Mus musculus]
gi|8358154|gb|AAF21807.2|AF095718_1 RRM-type RNA-binding protein brPTB [Mus musculus]
gi|5824110|emb|CAB54073.1| PTB-like protein [Rattus rattus]
gi|22711857|tpg|DAA00061.1| TPA_exp: splicing regulator nPTB2 [Mus musculus]
gi|74209570|dbj|BAE23317.1| unnamed protein product [Mus musculus]
Length = 532
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 90/169 (53%), Gaps = 14/169 (8%)
Query: 73 LRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEP------ES 126
+ I YS H +L ++ + N V A+ A + L G + +S
Sbjct: 126 IYIQYSNHKEL-------KTDNTLNQRAQVVLQAVTAVQTANTPLSGTTVSESAVTPAQS 178
Query: 127 NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEAL 186
VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK AL
Sbjct: 179 PVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLAL 238
Query: 187 EGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 239 DGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 286
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 102/223 (45%), Gaps = 46/223 (20%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 199 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 251
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS-----------GQLS--- 114
I +S +L+VK+ + +SRDYT P LP AI A+ G LS
Sbjct: 252 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGALSPLA 311
Query: 115 ---------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA 159
VG+ G + +L++++ + VT L +F +G VQ++
Sbjct: 312 IPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDVQRVK 369
Query: 160 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 202
+ N ALIQ D + +A L G +Y G ++ +S
Sbjct: 370 IL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLS 410
>gi|25392158|pir||JC7526 polypyrimidine tract-binding protein-like protein - rat
Length = 532
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 90/169 (53%), Gaps = 14/169 (8%)
Query: 73 LRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEP------ES 126
+ I YS H +L ++ + N V A+ A + L G + +S
Sbjct: 126 IYIQYSNHKEL-------KTDNTLNQRAQVVLQAVTAVQTANTPLSGTTVSESAVTPAQS 178
Query: 127 NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEAL 186
VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK AL
Sbjct: 179 PVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLAL 238
Query: 187 EGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 239 DGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 286
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 102/223 (45%), Gaps = 46/223 (20%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 199 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 251
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS-----------GQLS--- 114
I +S +L+VK+ + +SRDYT P LP AI A+ G LS
Sbjct: 252 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGALSPLA 311
Query: 115 ---------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA 159
VG+ G + +L++++ + VT L +F +G VQ++
Sbjct: 312 IPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDVQRVK 369
Query: 160 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 202
+ N ALIQ D + +A L G +Y G ++ +S
Sbjct: 370 IL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLS 410
>gi|413949171|gb|AFW81820.1| hypothetical protein ZEAMMB73_476847 [Zea mays]
Length = 529
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 106/222 (47%), Gaps = 49/222 (22%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKN-------ALDGRSIPRYLLP 65
+LQ+ FG V KI A QAL+Q D + SA ++ GR++
Sbjct: 107 LLQLLQPFGMVSKIVMLR--AKNQALLQMEDLHASVSALQYYTSVQPSIRGRNV------ 158
Query: 66 ENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPE 125
+ +S+H +L+ SH G + +
Sbjct: 159 --------YMQFSSHQELTTDQSSH-------------------------GRNSDQGSEP 185
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ +LL +I +M Y +T+++LH VF A+G V+KI F K+ G QALIQY Q AV A +
Sbjct: 186 NRILLVTIHHMIYPITVEILHQVFKAYGFVEKIVTFQKSAGFQALIQYHSRQEAVEAFGS 245
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
L G IYDG C+L I YS ++L + NNDRSRD+T PS P
Sbjct: 246 LHGRNIYDGC-CQLDIQYSNLSELQVHYNNDRSRDFTNPSLP 286
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 109/236 (46%), Gaps = 48/236 (20%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + QVF A+GFV KI TF+K+AGFQAL+Q+ + A A +L GR+I
Sbjct: 200 ITVEILHQVFKAYGFVEKIVTFQKSAGFQALIQYHSRQEAVEAFGSLHGRNIYD------ 253
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLP-------------------------- 101
G C L I YS ++L V + + RSRD+TNP LP
Sbjct: 254 -GCCQLDIQYSNLSELQVHYNNDRSRDFTNPSLPTEQRPRASQQGYLDPANLYAFQQAGA 312
Query: 102 -------VAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGP 154
VA A G L G+ G E L+ S N + D L +FS +G
Sbjct: 313 SYAQMGRVAMIAAAFGGTLPHGVTGTN---ERCTLIVSNLNTD-KIDEDKLFNLFSLYGN 368
Query: 155 VQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLS 210
+ +I + +N AL++ D A +A L+G ++ KL ++YS++ +++
Sbjct: 369 IVRIKIL-RNKPDHALVEMADGLQAELAVHYLKGSILFGK---KLEVNYSKYPNIT 420
>gi|431922192|gb|ELK19283.1| Polypyrimidine tract-binding protein 1 [Pteropus alecto]
Length = 566
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 57/117 (48%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY + +
Sbjct: 180 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYAEPVS 239
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 240 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 295
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 63/105 (60%), Gaps = 9/105 (8%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q+++ +A AK +LDG++I CTLR
Sbjct: 208 QIFSKFGTVLKIITFTKNNQFQALLQYAEPVSAQHAKLSLDGQNIYN-------ACCTLR 260
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS--AIDASGQLSVGL 117
I +S T L+VK+ + +SRDYT P LP S ++D + + GL
Sbjct: 261 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGL 305
>gi|148680405|gb|EDL12352.1| polypyrimidine tract binding protein 2, isoform CRA_b [Mus
musculus]
Length = 529
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 89/167 (53%), Gaps = 14/167 (8%)
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEP------ESNV 128
I YS H +L ++ + N V A+ A + L G + +S V
Sbjct: 125 IQYSNHKEL-------KTDNTLNQRAQVVLQAVTAVQTANTPLSGTTVSESAVTPAQSPV 177
Query: 129 LLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEG 188
L I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK AL+G
Sbjct: 178 LRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDG 237
Query: 189 HCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 238 QNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 283
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 102/223 (45%), Gaps = 46/223 (20%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 196 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 248
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS-----------GQLS--- 114
I +S +L+VK+ + +SRDYT P LP AI A+ G LS
Sbjct: 249 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGALSPLA 308
Query: 115 ---------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA 159
VG+ G + +L++++ + VT L +F +G VQ++
Sbjct: 309 IPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDVQRVK 366
Query: 160 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 202
+ N ALIQ D + +A L G +Y G ++ +S
Sbjct: 367 IL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLS 407
>gi|148680404|gb|EDL12351.1| polypyrimidine tract binding protein 2, isoform CRA_a [Mus
musculus]
Length = 528
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 90/169 (53%), Gaps = 14/169 (8%)
Query: 73 LRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEP------ES 126
+ I YS H +L ++ + N V A+ A + L G + +S
Sbjct: 123 IYIQYSNHKEL-------KTDNTLNQRAQVVLQAVTAVQTANTPLSGTTVSESAVTPAQS 175
Query: 127 NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEAL 186
VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK AL
Sbjct: 176 PVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLAL 235
Query: 187 EGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 236 DGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 283
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 102/223 (45%), Gaps = 46/223 (20%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 196 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 248
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS-----------GQLS--- 114
I +S +L+VK+ + +SRDYT P LP AI A+ G LS
Sbjct: 249 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGALSPLA 308
Query: 115 ---------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA 159
VG+ G + +L++++ + VT L +F +G VQ++
Sbjct: 309 IPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDVQRVK 366
Query: 160 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 202
+ N ALIQ D + +A L G +Y G ++ +S
Sbjct: 367 IL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLS 407
>gi|334702287|gb|AEG89703.1| polypyrimidine tract-binding protein 1 [Solanum tuberosum]
Length = 441
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 113/222 (50%), Gaps = 52/222 (23%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETA-------SSAKNALDGRSIPRYLLP 65
+LQ+F FG + K+ A QAL+Q D +A S+ + ++ GR++
Sbjct: 22 LLQLFQPFGVITKLVMLR--AKNQALLQMQDVPSAVKALQFYSNVQPSIRGRNV------ 73
Query: 66 ENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPE 125
+ +S+H +L+ +D + Q G+ EP
Sbjct: 74 --------YVQFSSHQELT---------------------TMDQNAQ------GRGDEP- 97
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ +LL +I +M Y +T+DVLH VFS G V+KI F K+ G QALIQY Q++V A+ +
Sbjct: 98 NRILLVTIHHMLYPITVDVLHQVFSPHGFVEKIVTFQKSAGFQALIQYQVQQSSVSARNS 157
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
L+G IYDG C+L I +S +L + NN+RSRDYT P+ P
Sbjct: 158 LQGRNIYDGC-CQLDIQFSNLDELQVNYNNERSRDYTNPNLP 198
>gi|326934420|ref|XP_003213288.1| PREDICTED: polypyrimidine tract-binding protein 1-like [Meleagris
gallopavo]
Length = 526
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 84/144 (58%), Gaps = 6/144 (4%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 144 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPMS 203
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 238
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P ++QP L Q
Sbjct: 204 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDNQPP-LDQ 261
Query: 239 QPVPMVGA----TANQYNGAQFAP 258
GA A+ Y GA F P
Sbjct: 262 TMAAAFGAPGIIPASPYAGAGFPP 285
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 55/87 (63%), Gaps = 7/87 (8%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 172 QIFSKFGTVLKIITFTKNNQFQALLQYADPMSAQHAKLSLDGQNIYN-------ACCTLR 224
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLP 101
I +S T L+VK+ + +SRDYT P LP
Sbjct: 225 IDFSKLTSLNVKYNNDKSRDYTRPDLP 251
>gi|71896363|ref|NP_001026106.1| polypyrimidine tract-binding protein 1 [Gallus gallus]
gi|60098495|emb|CAH65078.1| hypothetical protein RCJMB04_3b17 [Gallus gallus]
Length = 526
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 84/144 (58%), Gaps = 6/144 (4%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 144 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPMS 203
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 238
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P ++QP L Q
Sbjct: 204 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDNQPP-LDQ 261
Query: 239 QPVPMVGA----TANQYNGAQFAP 258
GA A+ Y GA F P
Sbjct: 262 TMAAAFGAPGIIPASPYAGAGFPP 285
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 55/87 (63%), Gaps = 7/87 (8%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 172 QIFSKFGTVLKIITFTKNNQFQALLQYADPMSAQHAKLSLDGQNIYN-------ACCTLR 224
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLP 101
I +S T L+VK+ + +SRDYT P LP
Sbjct: 225 IDFSKLTSLNVKYNNDKSRDYTRPDLP 251
>gi|74178228|dbj|BAE29899.1| unnamed protein product [Mus musculus]
Length = 529
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 74/117 (63%), Gaps = 1/117 (0%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 173 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 232
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
A AK +L G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 233 AQHAKLSLGGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 288
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 108/227 (47%), Gaps = 43/227 (18%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D +A AK +L G++I CTLR
Sbjct: 201 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLGGQNIYN-------ACCTLR 253
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS--AIDASGQLSVGLDGKKLE--------- 123
I +S T L+VK+ + +SRDYT P LP S ++D + + GL +
Sbjct: 254 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGLSVPNVHGALAPLAIP 313
Query: 124 ------------------PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA-MFDKN 164
++VLL S N + VT L ++F +G VQ++ +F+K
Sbjct: 314 SAAAAAAASRIAIPGLAGAGNSVLLVSNLNPER-VTPQSLFILFGVYGDVQRVKILFNKK 372
Query: 165 GGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 211
AL+Q D A +A L GH ++ + I+ S+H + +
Sbjct: 373 E--NALVQMADGSQAQLAMSHLNGHKLHGK---SVRITLSKHQSVQL 414
>gi|449441197|ref|XP_004138369.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
isoform 1 [Cucumis sativus]
Length = 434
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/239 (35%), Positives = 120/239 (50%), Gaps = 43/239 (17%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCT 72
+LQ+F FG + K+ A QAL+Q D SA NAL N+ P +
Sbjct: 24 LLQLFQPFGVITKLVMLR--AKNQALMQMQD---VPSAVNALQ--------FFANLQP-S 69
Query: 73 LRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLAS 132
+R ++ V+F SH+ + D + Q G+ EP + +LL +
Sbjct: 70 IR-----GRNVYVQFSSHQE-----------LTTADQNAQ------GRGDEP-NRILLVT 106
Query: 133 IENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 192
I +M Y +T++VLH VF G V+KI F K+ G QALIQY Q AV A+ AL+G IY
Sbjct: 107 IHHMLYPITVEVLHQVFFPHGFVEKIVTFQKSAGFQALIQYQTRQCAVSARTALQGRNIY 166
Query: 193 DGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQY 251
DG C+L I +S +L + NN+RSRD+T PS P S+P G+ P G T Y
Sbjct: 167 DGC-CQLDIQFSNLDELQVNYNNERSRDFTNPSLP---SEPK--GRSSQPGYGDTGGMY 219
>gi|242090663|ref|XP_002441164.1| hypothetical protein SORBIDRAFT_09g021560 [Sorghum bicolor]
gi|241946449|gb|EES19594.1| hypothetical protein SORBIDRAFT_09g021560 [Sorghum bicolor]
Length = 444
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/223 (34%), Positives = 110/223 (49%), Gaps = 51/223 (22%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKN-------ALDGRSIPRYLLP 65
+LQ+ FG V KI A QAL+Q D + SA ++ GR++
Sbjct: 22 LLQLLQPFGVVSKIVMLR--AKNQALLQMEDIHASVSALQYYTSVQPSIRGRNV------ 73
Query: 66 ENMGPCTLRITYSAHTDLSVKFQSH-RSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEP 124
+ +S+H +L+ SH R+ D ++ EP
Sbjct: 74 --------YMQFSSHQELTTDQSSHGRNSD-------------------------QESEP 100
Query: 125 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 184
+ +LL +I +M Y +T++VLH VF A+G V+KI F K+ G QALIQ+ Q AV A
Sbjct: 101 -NRILLVTIHHMIYPITVEVLHQVFKAYGFVEKIVTFQKSAGFQALIQFHSRQEAVEAFG 159
Query: 185 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
+L G IYDG C+L I YS ++L + NNDRSRD+T PS P
Sbjct: 160 SLHGRNIYDGC-CQLDIQYSNLSELQVHYNNDRSRDFTNPSLP 201
>gi|426219707|ref|XP_004004060.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 1 [Ovis
aries]
Length = 526
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/192 (41%), Positives = 102/192 (53%), Gaps = 15/192 (7%)
Query: 118 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 177
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 143 EGTILPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPL 202
Query: 178 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILG 237
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 203 NAHYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL-- 259
Query: 238 QQPVPMV------GATANQYNGAQ-FAPPP--PEQPMMHQPTAAGWGAVPP-ASQSMPMM 287
+P PM G ++ Y GA FAP P+ + P G GA+ P A S +
Sbjct: 260 -EP-PMAAAFGAPGIISSPYAGAAGFAPAIGFPQATGLSVPAGLGPGALGPLAITSSAVT 317
Query: 288 GNHPYMPPGSMP 299
G G MP
Sbjct: 318 GRMAIPGAGGMP 329
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 53/89 (59%), Gaps = 7/89 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 172 QIFSKFGTVLKIITFTKNNQFQALLQYADPLNAHYAKMALDGQNIYNAC-------CTLR 224
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVA 103
I +S T L+VK+ + +SRD+T LP
Sbjct: 225 IDFSKLTSLNVKYNNDKSRDFTRLDLPTG 253
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 81/198 (40%), Gaps = 22/198 (11%)
Query: 11 IFILQVFSAFGFVHKITT-FEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMG 69
+FIL F +G VH++ F K ALVQ +D A A N L G+ + +L
Sbjct: 349 LFIL--FGVYGDVHRVKIMFNKKE--NALVQMADANQAQLAMNHLSGQRLYGKVL----- 399
Query: 70 PCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVL 129
R T S H + + + + T + G + + + P S L
Sbjct: 400 ----RATLSKHQAVQLPREGQEDQGLTKDFSNSPLHRFKKPGSKNF----QNIFPPSATL 451
Query: 130 LASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGH 189
+ N+ +VT+D L +F+ G K F + ALIQ V+ A+ A L H
Sbjct: 452 --HLSNIPPSVTVDDLKNLFTEAGCSVKAFKFFQKDRKMALIQLGSVEEAIQALIELHNH 509
Query: 190 CIYDGGFCKLHISYSRHT 207
+ G L +S+S+ T
Sbjct: 510 DL--GENHHLRVSFSKST 525
>gi|449508136|ref|XP_002190438.2| PREDICTED: polypyrimidine tract-binding protein 2 [Taeniopygia
guttata]
Length = 537
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 72/111 (64%), Gaps = 1/111 (0%)
Query: 125 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 184
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+Q+ D A AK+
Sbjct: 177 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQFGDPVNAQQAKQ 236
Query: 185 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 237 ALDGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPTL 286
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 106/237 (44%), Gaps = 53/237 (22%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+QF D A AK ALDG++I CTLR
Sbjct: 199 QIFSKFGAVLKIITFTKNNQFQALLQFGDPVNAQQAKQALDGQNIYN-------ACCTLR 251
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS----------------GQ 112
I +S +L+VK+ + +SRDYT P LP AI A+ G
Sbjct: 252 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPTLDPAIAAAFAKETSLLGLPVAAVPGA 311
Query: 113 LS------------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGP 154
LS VG+ G + +L++++ + VT L +F +G
Sbjct: 312 LSPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGD 369
Query: 155 VQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 211
VQ++ + N ALIQ D + +A L G +Y G + ++ S+H + +
Sbjct: 370 VQRVKIL-YNKKDSALIQMADGNQSQLAMSHLNGQKMY-GKIIR--VTLSKHQSVQL 422
>gi|359480735|ref|XP_002277938.2| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
isoform 1 [Vitis vinifera]
Length = 448
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/215 (35%), Positives = 108/215 (50%), Gaps = 34/215 (15%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCT 72
+LQ+ FG V K+ A QAL+Q D +A SA + Y N+ P
Sbjct: 22 LLQLVHPFGVVTKLVMLR--AKNQALLQMQDVASAVSA--------LQYY---ANVQPSV 68
Query: 73 LRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLAS 132
++ V+F SH+ + Q S G G + + +LL +
Sbjct: 69 ------RGRNVYVQFSSHQE--------------LTTMDQNSQGRKGDQDAQPNRILLVT 108
Query: 133 IENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 192
I ++ Y +T++VLH VFS G V+KI F K+ G QALIQY Q+AV A AL+G IY
Sbjct: 109 IHHLLYPITVEVLHQVFSPHGFVEKIVTFQKSAGFQALIQYQSRQSAVSAINALQGRNIY 168
Query: 193 DGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
D G C+L I +S T+L + NN+RSRD+T PS P
Sbjct: 169 D-GCCQLDIQFSNLTELQVNYNNERSRDFTNPSLP 202
>gi|417402381|gb|JAA48040.1| Putative hnrnp-l/ptb/hephaestus splicing factor family [Desmodus
rotundus]
Length = 531
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/117 (48%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY + +
Sbjct: 174 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYAEPVS 233
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 234 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 289
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 110/228 (48%), Gaps = 44/228 (19%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q+++ +A AK +LDG++I CTLR
Sbjct: 202 QIFSKFGTVLKIITFTKNNQFQALLQYAEPVSAQHAKLSLDGQNIYN-------ACCTLR 254
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS--AIDASGQLSVGLDGKKLE--------- 123
I +S T L+VK+ + +SRDYT P LP S ++D + + GL +
Sbjct: 255 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGLSVPNVHGALAPLAIP 314
Query: 124 -------------------PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA-MFDK 163
++VLL S N + VT L ++F +G VQ++ +F+K
Sbjct: 315 SAAAAAAAAGRIAIPGLAGAGNSVLLVSNLNPER-VTPQSLFILFGVYGDVQRVKILFNK 373
Query: 164 NGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 211
AL+Q D A +A L GH ++ + I+ S+H ++ +
Sbjct: 374 KE--NALVQMADGSQAQLAMSHLNGHKLHGK---PVRITLSKHQNVQL 416
>gi|357623431|gb|EHJ74585.1| putative polypyrimidine tract binding protein [Danaus plexippus]
Length = 621
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/139 (43%), Positives = 83/139 (59%), Gaps = 6/139 (4%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VL IE+M Y + LDVL+ +F +G V KI F KN QALIQYPD +A +AK A
Sbjct: 242 NTVLRVIIEHMLYPIVLDVLYSIFQRYGKVLKIVTFTKNNSFQALIQYPDTGSAQMAKTA 301
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQP-SILGQQPVPMV 244
L+G IY+ G C L I YS+ T L++K NND+SRDYT P+ P + +L + +P+
Sbjct: 302 LDGQNIYN-GCCTLRIDYSKMTCLNVKYNNDKSRDYTNPTLPSGDGDAHQLLTSELMPLR 360
Query: 245 G----ATANQYNGAQFAPP 259
A++ +G APP
Sbjct: 361 AHLALNLASRMSGGVLAPP 379
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 60/95 (63%), Gaps = 9/95 (9%)
Query: 7 LLKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPE 66
+L V++ +F +G V KI TF K FQAL+Q+ DT +A AK ALDG++I
Sbjct: 257 VLDVLY--SIFQRYGKVLKIVTFTKNNSFQALIQYPDTGSAQMAKTALDGQNIYN----- 309
Query: 67 NMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLP 101
G CTLRI YS T L+VK+ + +SRDYTNP LP
Sbjct: 310 --GCCTLRIDYSKMTCLNVKYNNDKSRDYTNPTLP 342
>gi|356499519|ref|XP_003518587.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
[Glycine max]
Length = 439
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/219 (34%), Positives = 106/219 (48%), Gaps = 47/219 (21%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPC- 71
+LQ+F FG + K+ A QAL+Q D SA NAL N+ P
Sbjct: 22 LLQLFQPFGVITKLVMLR--AKNQALLQMQDI---PSAVNALQ--------FYANVQPSI 68
Query: 72 ---TLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNV 128
+ + +S+H +L+ Q+ D EP + +
Sbjct: 69 RGRNVYVQFSSHQELTTMDQNQARED----------------------------EP-NRI 99
Query: 129 LLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEG 188
LL ++ +M Y +T DVLH VFS G V+KI F K+ G QALIQY Q+AV A+ L+G
Sbjct: 100 LLVTVHHMLYPITADVLHQVFSPHGFVEKIVTFQKSAGFQALIQYQSRQSAVTARSTLQG 159
Query: 189 HCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
IYDG C+L I +S +L + NNDRSRD+T P+ P
Sbjct: 160 RNIYDGC-CQLDIQFSNLDELQVNYNNDRSRDFTNPNLP 197
>gi|449503770|ref|XP_004162168.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
[Cucumis sativus]
Length = 432
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/239 (35%), Positives = 120/239 (50%), Gaps = 43/239 (17%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCT 72
+LQ+F FG + K+ A QAL+Q D SA NAL N+ P +
Sbjct: 22 LLQLFQPFGVITKLVMLR--AKNQALMQMQD---VPSAVNALQ--------FFANLQP-S 67
Query: 73 LRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLAS 132
+R ++ V+F SH+ + D + Q G+ EP + +LL +
Sbjct: 68 IR-----GRNVYVQFSSHQE-----------LTTADQNAQ------GRGDEP-NRILLVT 104
Query: 133 IENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 192
I +M Y +T++VLH VF G V+KI F K+ G QALIQY Q AV A+ AL+G IY
Sbjct: 105 IHHMLYPITVEVLHQVFFPHGFVEKIVTFQKSAGFQALIQYQTRQCAVSARTALQGRNIY 164
Query: 193 DGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQY 251
DG C+L I +S +L + NN+RSRD+T PS P S+P G+ P G T Y
Sbjct: 165 DGC-CQLDIQFSNLDELQVNYNNERSRDFTNPSLP---SEPK--GRSSQPGYGDTGGMY 217
>gi|13786186|ref|NP_112636.1| polypyrimidine tract-binding protein 3 [Rattus norvegicus]
gi|50401225|sp|Q9Z118.1|PTBP3_RAT RecName: Full=Polypyrimidine tract-binding protein 3; AltName:
Full=Regulator of differentiation 1; Short=Rod1
gi|4514552|dbj|BAA75465.1| Rod1 [Rattus norvegicus]
Length = 523
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/209 (37%), Positives = 100/209 (47%), Gaps = 38/209 (18%)
Query: 110 SGQLSV----GLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNG 165
SG LS+ +G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN
Sbjct: 130 SGNLSLPGATSNEGTLLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNN 189
Query: 166 GLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 225
QAL+QY D A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T
Sbjct: 190 QFQALLQYADPVNAQYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLD 248
Query: 226 TPMVNSQPSILGQQPVPMVGATANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMP 285
P + QPS+ E PM AA +GA P S P
Sbjct: 249 LPTGDGQPSL--------------------------EPPM-----AAAFGA--PGIMSSP 275
Query: 286 MMGNHPYMPPGSMPMGPGMMQMHMPGQSG 314
G + P + P G+ +PG G
Sbjct: 276 YAGAAGFAPAIAFPQAAGLSVSAVPGALG 304
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 53/88 (60%), Gaps = 7/88 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 171 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAQYAKMALDGQNIYN-------ACCTLR 223
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPV 102
I +S T L+VK+ + +SRD+T LP
Sbjct: 224 IDFSKLTSLNVKYNNDKSRDFTRLDLPT 251
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 81/198 (40%), Gaps = 22/198 (11%)
Query: 11 IFILQVFSAFGFVHKITT-FEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMG 69
+FIL F +G VH++ F K ALVQ +D A A N L G+ + +L
Sbjct: 346 LFIL--FGVYGDVHRVKIMFNKKE--NALVQMADASQAQIAMNHLSGQRLYGKVL----- 396
Query: 70 PCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVL 129
R T S H + + + + T + G + + + P S L
Sbjct: 397 ----RATLSKHQAVQLPREGQEDQGLTKDFSNSPLHRFKKPGSKNF----QNIFPPSATL 448
Query: 130 LASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGH 189
+ N+ +VT+D L +F+ G K F + ALIQ V+ A+ A L H
Sbjct: 449 --HLSNIPPSVTMDDLKNLFTEAGCSVKAFKFFQKDRKMALIQLGSVEEAIQALIELHNH 506
Query: 190 CIYDGGFCKLHISYSRHT 207
+ G L +S+S+ T
Sbjct: 507 DL--GENHHLRVSFSKST 522
>gi|410967802|ref|XP_003990404.1| PREDICTED: polypyrimidine tract-binding protein 2 [Felis catus]
Length = 566
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 125 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 184
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 211 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 270
Query: 185 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 271 ALDGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 320
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 102/223 (45%), Gaps = 46/223 (20%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 233 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 285
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS-----------GQLS--- 114
I +S +L+VK+ + +SRDYT P LP AI A+ G LS
Sbjct: 286 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGALSPLA 345
Query: 115 ---------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA 159
VG+ G + +L++++ + VT L +F +G VQ++
Sbjct: 346 IPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDVQRVK 403
Query: 160 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 202
+ N ALIQ D + +A L G +Y G ++ +S
Sbjct: 404 IL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLS 444
>gi|224082480|ref|XP_002306709.1| predicted protein [Populus trichocarpa]
gi|222856158|gb|EEE93705.1| predicted protein [Populus trichocarpa]
Length = 434
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/215 (36%), Positives = 112/215 (52%), Gaps = 38/215 (17%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCT 72
+LQ+F FG + K+ A QAL+Q D SA NAL + + P G
Sbjct: 22 LLQLFQPFGVITKLVMLR--AKNQALLQMQD---VPSAINALQYYTDVQ---PTIRGR-N 72
Query: 73 LRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLAS 132
+ I +S+H +L+ +D + Q G+ EP + +LL +
Sbjct: 73 VYIQFSSHQELT---------------------TMDQNTQ------GRGEEP-NRILLIT 104
Query: 133 IENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 192
I +MQY +T+DVLH VFS G V+K+ F K+ G QALIQY Q+AV A+ +L+G IY
Sbjct: 105 IHHMQYPITVDVLHQVFSPHGFVEKMVTFQKSAGFQALIQYQSRQSAVQARTSLQGRNIY 164
Query: 193 DGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
DG C+L I +S +L + NND SRD+T P+ P
Sbjct: 165 DGC-CQLDIQFSNLDELQVNYNNDSSRDFTNPNLP 198
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 106/218 (48%), Gaps = 37/218 (16%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
QVFS GFV K+ TF+K+AGFQAL+Q+ ++A A+ +L GR+I G C L
Sbjct: 119 QVFSPHGFVEKMVTFQKSAGFQALIQYQSRQSAVQARTSLQGRNIYD-------GCCQLD 171
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDAS----------------------GQ 112
I +S +L V + + SRD+TNP LP A + G
Sbjct: 172 IQFSNLDELQVNYNNDSSRDFTNPNLPSEQKARSSQVCTRLLLYFHMPNAAAIAAAFGGG 231
Query: 113 LSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQ 172
L G+ G +L++++ + + D L +FS +G + +I + +N AL+Q
Sbjct: 232 LPPGISGTN--DRCTILVSNLNPDR--IDEDKLFNLFSLYGNIVRIKLL-RNKPDHALVQ 286
Query: 173 YPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLS 210
D A +A L+G ++ ++ +++S+H +++
Sbjct: 287 MGDGFQAELAVHFLKGAMLFGK---RMEVNFSKHPNIT 321
>gi|149037108|gb|EDL91639.1| ROD1 regulator of differentiation 1 (S. pombe), isoform CRA_b
[Rattus norvegicus]
gi|149037109|gb|EDL91640.1| ROD1 regulator of differentiation 1 (S. pombe), isoform CRA_b
[Rattus norvegicus]
Length = 514
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/209 (37%), Positives = 100/209 (47%), Gaps = 38/209 (18%)
Query: 110 SGQLSV----GLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNG 165
SG LS+ +G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN
Sbjct: 121 SGNLSLPGATSNEGTLLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNN 180
Query: 166 GLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 225
QAL+QY D A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T
Sbjct: 181 QFQALLQYADPVNAQYAKMALDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDFTRLD 239
Query: 226 TPMVNSQPSILGQQPVPMVGATANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMP 285
P + QPS+ E PM AA +GA P S P
Sbjct: 240 LPTGDGQPSL--------------------------EPPM-----AAAFGA--PGIMSSP 266
Query: 286 MMGNHPYMPPGSMPMGPGMMQMHMPGQSG 314
G + P + P G+ +PG G
Sbjct: 267 YAGAAGFAPAIAFPQAAGLSVSAVPGALG 295
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 53/87 (60%), Gaps = 7/87 (8%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 162 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAQYAKMALDGQNIYN-------ACCTLR 214
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLP 101
I +S T L+VK+ + +SRD+T LP
Sbjct: 215 IDFSKLTSLNVKYNNDKSRDFTRLDLP 241
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 81/198 (40%), Gaps = 22/198 (11%)
Query: 11 IFILQVFSAFGFVHKITT-FEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMG 69
+FIL F +G VH++ F K ALVQ +D A A N L G+ + +L
Sbjct: 337 LFIL--FGVYGDVHRVKIMFNKKE--NALVQMADASQAQIAMNHLSGQRLYGKVL----- 387
Query: 70 PCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVL 129
R T S H + + + + T + G + + + P S L
Sbjct: 388 ----RATLSKHQAVQLPREGQEDQGLTKDFSNSPLHRFKKPGSKNF----QNIFPPSATL 439
Query: 130 LASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGH 189
+ N+ +VT+D L +F+ G K F + ALIQ V+ A+ A L H
Sbjct: 440 --HLSNIPPSVTMDDLKNLFTEAGCSVKAFKFFQKDRKMALIQLGSVEEAIQALIELHNH 497
Query: 190 CIYDGGFCKLHISYSRHT 207
+ G L +S+S+ T
Sbjct: 498 DL--GENHHLRVSFSKST 513
>gi|402588250|gb|EJW82183.1| hypothetical protein WUBG_06907, partial [Wuchereria bancrofti]
Length = 255
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 97/178 (54%), Gaps = 19/178 (10%)
Query: 102 VAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMF 161
++ SA+D S + +P S VL IENM Y VTLDVLH +FS +G V +I F
Sbjct: 19 ISASALDISA-------CTQQQPNS-VLRVIIENMLYPVTLDVLHQIFSRYGKVLRIITF 70
Query: 162 DKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDY 221
+KN QAL+Q + +A +A+++L+G +Y+G C L I YS+ L++K NND+SRDY
Sbjct: 71 NKNNTFQALVQLSEANSAQLARQSLDGQNVYNGCCC-LRIDYSKLATLNVKYNNDKSRDY 129
Query: 222 TLPSTPMVNSQPSILGQQPVPMVGATANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPP 279
T P+ P S L QQ + AT G Q P ++ P A +GA P
Sbjct: 130 TNPNLP---SGELTLEQQLSLVSAAT-----GGQMGPAIAS--LVQSPFAFPFGAANP 177
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 61/110 (55%), Gaps = 7/110 (6%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS +G V +I TF K FQALVQ S+ +A A+ +LDG+++ G C LR
Sbjct: 56 QIFSRYGKVLRIITFNKNNTFQALVQLSEANSAQLARQSLDGQNVYN-------GCCCLR 108
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEP 124
I YS L+VK+ + +SRDYTNP LP ++ L G ++ P
Sbjct: 109 IDYSKLATLNVKYNNDKSRDYTNPNLPSGELTLEQQLSLVSAATGGQMGP 158
>gi|348586487|ref|XP_003479000.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Cavia
porcellus]
Length = 581
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 125 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 184
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 226 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 285
Query: 185 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 286 ALDGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 335
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 102/223 (45%), Gaps = 46/223 (20%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 248 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 300
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS-----------GQLS--- 114
I +S +L+VK+ + +SRDYT P LP AI A+ G LS
Sbjct: 301 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGALSPLA 360
Query: 115 ---------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA 159
VG+ G + +L++++ + VT L +F +G VQ++
Sbjct: 361 IPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDVQRVK 418
Query: 160 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 202
+ N ALIQ D + +A L G +Y G ++ +S
Sbjct: 419 IL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLS 459
>gi|440902651|gb|ELR53420.1| Polypyrimidine tract-binding protein 2, partial [Bos grunniens
mutus]
Length = 524
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 125 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 184
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 164 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 223
Query: 185 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 224 ALDGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 273
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 104/232 (44%), Gaps = 53/232 (22%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 186 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 238
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS----------------GQ 112
I +S +L+VK+ + +SRDYT P LP AI A+ G
Sbjct: 239 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLGLPVAAVPGA 298
Query: 113 LS------------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGP 154
LS VG+ G + +L++++ + VT L +F +G
Sbjct: 299 LSPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGD 356
Query: 155 VQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRH 206
VQ++ + N ALIQ D + +A L G +Y G + ++ S+H
Sbjct: 357 VQRVKIL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIR--VTLSKH 404
>gi|344293564|ref|XP_003418492.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Loxodonta
africana]
Length = 686
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 125 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 184
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 326 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 385
Query: 185 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 386 ALDGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 435
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 105/237 (44%), Gaps = 53/237 (22%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 348 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 400
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS----------------GQ 112
I +S +L+VK+ + +SRDYT P LP AI A+ G
Sbjct: 401 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLGLPVAAVPGA 460
Query: 113 LS------------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGP 154
LS VG+ G + +L++++ + VT L +F +G
Sbjct: 461 LSPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGD 518
Query: 155 VQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 211
VQ++ + N ALIQ D + +A L G +Y + ++ S+H + +
Sbjct: 519 VQRVKIL-YNKKDSALIQMADGNQSQLAMNHLNGQKMYGK---IIRVTLSKHQTVQL 571
>gi|426216016|ref|XP_004002265.1| PREDICTED: polypyrimidine tract-binding protein 2 [Ovis aries]
Length = 510
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 125 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 184
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 150 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 209
Query: 185 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 210 ALDGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 259
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 102/228 (44%), Gaps = 51/228 (22%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 172 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 224
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS----------------GQ 112
I +S +L+VK+ + +SRDYT P LP AI A+ G
Sbjct: 225 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLGLPVAAVPGA 284
Query: 113 LS------------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGP 154
LS VG+ G + +L++++ + VT L +F +G
Sbjct: 285 LSPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGD 342
Query: 155 VQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 202
VQ++ + N ALIQ D + +A L G +Y G ++ +S
Sbjct: 343 VQRVKIL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLS 388
>gi|351704481|gb|EHB07400.1| Polypyrimidine tract-binding protein 2 [Heterocephalus glaber]
Length = 539
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 125 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 184
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 177 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 236
Query: 185 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 237 ALDGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 286
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 104/234 (44%), Gaps = 55/234 (23%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 199 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 251
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS----------------GQ 112
I +S +L+VK+ + +SRDYT P LP AI A+ G
Sbjct: 252 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLGLPVAAVPGA 311
Query: 113 LS--------------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAF 152
LS VG+ G + +L++++ + VT L +F +
Sbjct: 312 LSPLAIPNAXXXXXXXXAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVY 369
Query: 153 GPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRH 206
G VQ++ + N ALIQ D + +A L G +Y G + ++ S+H
Sbjct: 370 GDVQRVKIL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIR--VTLSKH 419
>gi|281349698|gb|EFB25282.1| hypothetical protein PANDA_003123 [Ailuropoda melanoleuca]
Length = 501
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 125 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 184
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 141 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 200
Query: 185 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 201 ALDGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 250
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 104/232 (44%), Gaps = 53/232 (22%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 163 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 215
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS----------------GQ 112
I +S +L+VK+ + +SRDYT P LP AI A+ G
Sbjct: 216 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLGLPVAAVPGA 275
Query: 113 LS------------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGP 154
LS VG+ G + +L++++ + VT L +F +G
Sbjct: 276 LSPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGD 333
Query: 155 VQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRH 206
VQ++ + N ALIQ D + +A L G +Y G + ++ S+H
Sbjct: 334 VQRVKIL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIR--VTLSKH 381
>gi|293335567|ref|NP_001169470.1| uncharacterized protein LOC100383343 [Zea mays]
gi|224029557|gb|ACN33854.1| unknown [Zea mays]
Length = 444
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 106/222 (47%), Gaps = 49/222 (22%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKN-------ALDGRSIPRYLLP 65
+LQ+ FG V KI A QAL+Q D + SA ++ GR++
Sbjct: 22 LLQLLQPFGMVSKIVMLR--AKNQALLQMEDLHASVSALQYYTSVQPSIRGRNV------ 73
Query: 66 ENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPE 125
+ +S+H +L+ SH G + +
Sbjct: 74 --------YMQFSSHQELTTDQSSH-------------------------GRNSDQGSEP 100
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ +LL +I +M Y +T+++LH VF A+G V+KI F K+ G QALIQY Q AV A +
Sbjct: 101 NRILLVTIHHMIYPITVEILHQVFKAYGFVEKIVTFQKSAGFQALIQYHSRQEAVEAFGS 160
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
L G IYDG C+L I YS ++L + NNDRSRD+T PS P
Sbjct: 161 LHGRNIYDGC-CQLDIQYSNLSELQVHYNNDRSRDFTNPSLP 201
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 109/236 (46%), Gaps = 48/236 (20%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + QVF A+GFV KI TF+K+AGFQAL+Q+ + A A +L GR+I
Sbjct: 115 ITVEILHQVFKAYGFVEKIVTFQKSAGFQALIQYHSRQEAVEAFGSLHGRNIYD------ 168
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLP-------------------------- 101
G C L I YS ++L V + + RSRD+TNP LP
Sbjct: 169 -GCCQLDIQYSNLSELQVHYNNDRSRDFTNPSLPTEQRPRASQQGYLDPANLYAFQQAGA 227
Query: 102 -------VAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGP 154
VA A G L G+ G E L+ S N + D L +FS +G
Sbjct: 228 SYAQMGRVAMIAAAFGGTLPHGVTGTN---ERCTLIVSNLNTD-KIDEDKLFNLFSLYGN 283
Query: 155 VQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLS 210
+ +I + +N AL++ D A +A L+G ++ KL ++YS++ +++
Sbjct: 284 IVRIKIL-RNKPDHALVEMADGLQAELAVHYLKGSILFGK---KLEVNYSKYPNIT 335
>gi|116175255|ref|NP_001070683.1| regulator of differentiation 1 [Sus scrofa]
gi|115371761|gb|ABI96205.1| ROD1 [Sus scrofa]
Length = 523
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/171 (42%), Positives = 95/171 (55%), Gaps = 14/171 (8%)
Query: 118 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 177
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 140 EGTILPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPL 199
Query: 178 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILG 237
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 200 NAHYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL-- 256
Query: 238 QQPVPMV------GATANQYNGAQ-FAPPP--PEQPMMHQPTAAGWGAVPP 279
+P PM G ++ Y GA FAP P+ + P G GA+ P
Sbjct: 257 -EP-PMAAAFGAPGIISSPYAGAAGFAPAIGFPQATGLSVPAGLGPGALGP 305
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 53/89 (59%), Gaps = 7/89 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 169 QIFSKFGTVLKIITFTKNNQFQALLQYADPLNAHYAKMALDGQNIYNAC-------CTLR 221
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVA 103
I +S T L+VK+ + +SRD+T LP
Sbjct: 222 IDFSKLTSLNVKYNNDKSRDFTRLDLPTG 250
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 81/198 (40%), Gaps = 22/198 (11%)
Query: 11 IFILQVFSAFGFVHKITT-FEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMG 69
+FIL F +G VH++ F K ALVQ +D A A N L G+ + +L
Sbjct: 346 LFIL--FGVYGDVHRVKIMFNKKE--NALVQMADANQAQLAMNHLSGQRLYGKVL----- 396
Query: 70 PCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVL 129
R T S H + + + + T + G + + + P S L
Sbjct: 397 ----RATLSKHQAVQLPREGQEDQGLTKDFSNSPLHRFKKPGSKNF----QNIFPPSATL 448
Query: 130 LASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGH 189
+ N+ +VT+D L +F+ G K F + ALIQ V+ A+ A L H
Sbjct: 449 --HLSNIPPSVTVDDLKNLFTEAGCSVKAFKFFQKDRKMALIQLGSVEEAIQALIELHNH 506
Query: 190 CIYDGGFCKLHISYSRHT 207
+ G L +S+S+ T
Sbjct: 507 DL--GENHHLRVSFSKST 522
>gi|194389558|dbj|BAG61740.1| unnamed protein product [Homo sapiens]
Length = 548
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 125 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 184
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 188 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 247
Query: 185 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 248 ALDGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 297
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 102/228 (44%), Gaps = 51/228 (22%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 210 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 262
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS----------------GQ 112
I +S +L+VK+ + +SRDYT P LP AI A+ G
Sbjct: 263 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLGLPVAAVPGA 322
Query: 113 LS------------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGP 154
LS VG+ G + +L++++ + VT L +F +G
Sbjct: 323 LSPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGD 380
Query: 155 VQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 202
VQ++ + N ALIQ D + +A L G +Y G ++ +S
Sbjct: 381 VQRVKIL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLS 426
>gi|354504008|ref|XP_003514071.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Cricetulus
griseus]
Length = 501
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 125 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 184
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 146 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 205
Query: 185 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 206 ALDGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 255
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 104/227 (45%), Gaps = 48/227 (21%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 168 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 220
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS-----------GQLS--- 114
I +S +L+VK+ + +SRDYT P LP AI A+ G LS
Sbjct: 221 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGALSPLA 280
Query: 115 ---------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA 159
VG+ G + +L++++ + VT L +F +G VQ++
Sbjct: 281 IPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDVQRVK 338
Query: 160 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRH 206
+ N ALIQ D + +A L G +Y G + ++ S+H
Sbjct: 339 IL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIR--VTLSKH 381
>gi|431896401|gb|ELK05813.1| Polypyrimidine tract-binding protein 2 [Pteropus alecto]
Length = 485
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 125 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 184
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 125 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 184
Query: 185 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 185 ALDGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 234
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 104/232 (44%), Gaps = 53/232 (22%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 147 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 199
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS----------------GQ 112
I +S +L+VK+ + +SRDYT P LP AI A+ G
Sbjct: 200 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLGLPVAAVPGA 259
Query: 113 LS------------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGP 154
LS VG+ G + +L++++ + VT L +F +G
Sbjct: 260 LSPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGD 317
Query: 155 VQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRH 206
VQ++ + N ALIQ D + +A L G +Y G + ++ S+H
Sbjct: 318 VQRVKIL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIR--VTLSKH 365
>gi|395821709|ref|XP_003784179.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 1
[Otolemur garnettii]
Length = 540
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 88/167 (52%), Gaps = 14/167 (8%)
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEP------ESNV 128
I YS H +L ++ + N A+ A S L G + +S V
Sbjct: 136 IQYSNHKEL-------KTDNTLNQRAQAVLQAVTAVQTASTPLSGTTVSESAVTPAQSPV 188
Query: 129 LLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEG 188
L I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK AL+G
Sbjct: 189 LRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDG 248
Query: 189 HCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 249 QNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 294
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 102/223 (45%), Gaps = 46/223 (20%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 207 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 259
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS-----------GQLS--- 114
I +S +L+VK+ + +SRDYT P LP AI A+ G LS
Sbjct: 260 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGALSPLA 319
Query: 115 ---------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA 159
VG+ G + +L++++ + VT L +F +G VQ++
Sbjct: 320 IPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDVQRVK 377
Query: 160 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 202
+ N ALIQ D + +A L G +Y G ++ +S
Sbjct: 378 IL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLS 418
>gi|157137151|ref|XP_001663911.1| polypyrimidine tract binding protein [Aedes aegypti]
gi|108869791|gb|EAT34016.1| AAEL013723-PA [Aedes aegypti]
Length = 539
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/102 (50%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VL +E++ Y V+LD+L+ +F FG V KI F KN QALIQYPD TA +AK+
Sbjct: 151 NTVLRVIVESLLYPVSLDILYQIFQRFGKVLKIVTFTKNNSFQALIQYPDAATAQLAKQT 210
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
L+G IY+ G C L I S+ T L++K NND+SRDYT P+ P
Sbjct: 211 LDGQNIYN-GCCTLRIDNSKLTSLNVKYNNDKSRDYTNPTLP 251
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 60/109 (55%), Gaps = 11/109 (10%)
Query: 12 FILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPC 71
+ Q+F FG V KI TF K FQAL+Q+ D TA AK LDG++I G C
Sbjct: 169 ILYQIFQRFGKVLKIVTFTKNNSFQALIQYPDAATAQLAKQTLDGQNIYN-------GCC 221
Query: 72 TLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID----ASGQLSVG 116
TLRI S T L+VK+ + +SRDYTNP LP D A G +S G
Sbjct: 222 TLRIDNSKLTSLNVKYNNDKSRDYTNPTLPSGEPGSDVIASAGGLVSAG 270
>gi|297279324|ref|XP_001105316.2| PREDICTED: polypyrimidine tract-binding protein 2-like isoform 6
[Macaca mulatta]
gi|22218306|gb|AAM94625.1| non-neuronal splice variant nPTB4 [Homo sapiens]
gi|119593412|gb|EAW73006.1| polypyrimidine tract binding protein 2, isoform CRA_b [Homo
sapiens]
Length = 536
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 125 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 184
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 177 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 236
Query: 185 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 237 ALDGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 286
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 104/232 (44%), Gaps = 53/232 (22%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 199 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 251
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS----------------GQ 112
I +S +L+VK+ + +SRDYT P LP AI A+ G
Sbjct: 252 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLGLPVAAVPGA 311
Query: 113 LS------------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGP 154
LS VG+ G + +L++++ + VT L +F +G
Sbjct: 312 LSPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGD 369
Query: 155 VQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRH 206
VQ++ + N ALIQ D + +A L G +Y G + ++ S+H
Sbjct: 370 VQRVKIL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIR--VTLSKH 417
>gi|426330458|ref|XP_004026228.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 3
[Gorilla gorilla gorilla]
Length = 548
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 125 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 184
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 188 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 247
Query: 185 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 248 ALDGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 297
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 102/228 (44%), Gaps = 51/228 (22%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 210 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 262
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS----------------GQ 112
I +S +L+VK+ + +SRDYT P LP AI A+ G
Sbjct: 263 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLGLPVAAVPGA 322
Query: 113 LS------------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGP 154
LS VG+ G + +L++++ + VT L +F +G
Sbjct: 323 LSPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGD 380
Query: 155 VQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 202
VQ++ + N ALIQ D + +A L G +Y G ++ +S
Sbjct: 381 VQRVKIL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLS 426
>gi|73959499|ref|XP_866820.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 4 [Canis
lupus familiaris]
gi|119593416|gb|EAW73010.1| polypyrimidine tract binding protein 2, isoform CRA_f [Homo
sapiens]
Length = 480
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 125 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 184
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 125 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 184
Query: 185 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 185 ALDGQNIYNAC-CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 234
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 104/227 (45%), Gaps = 48/227 (21%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 147 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 199
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS-----------GQLS--- 114
I +S +L+VK+ + +SRDYT P LP AI A+ G LS
Sbjct: 200 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGALSPLA 259
Query: 115 ---------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA 159
VG+ G + +L++++ + VT L +F +G VQ++
Sbjct: 260 IPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDVQRVK 317
Query: 160 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRH 206
+ N ALIQ D + +A L G +Y G + ++ S+H
Sbjct: 318 IL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIR--VTLSKH 360
>gi|395821711|ref|XP_003784180.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 2
[Otolemur garnettii]
Length = 531
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 89/169 (52%), Gaps = 14/169 (8%)
Query: 73 LRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEP------ES 126
+ I YS H +L ++ + N A+ A S L G + +S
Sbjct: 126 IYIQYSNHKEL-------KTDNTLNQRAQAVLQAVTAVQTASTPLSGTTVSESAVTPAQS 178
Query: 127 NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEAL 186
VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK AL
Sbjct: 179 PVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLAL 238
Query: 187 EGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 239 DGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 286
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 104/227 (45%), Gaps = 48/227 (21%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 199 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 251
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS-----------GQLS--- 114
I +S +L+VK+ + +SRDYT P LP AI A+ G LS
Sbjct: 252 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGALSPLA 311
Query: 115 ---------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA 159
VG+ G + +L++++ + VT L +F +G VQ++
Sbjct: 312 IPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDVQRVK 369
Query: 160 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRH 206
+ N ALIQ D + +A L G +Y G + ++ S+H
Sbjct: 370 IL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIR--VTLSKH 412
>gi|301758643|ref|XP_002915171.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Ailuropoda
melanoleuca]
gi|395730215|ref|XP_002810624.2| PREDICTED: polypyrimidine tract-binding protein 2 isoform 1 [Pongo
abelii]
gi|22218304|gb|AAM94624.1| non-neuronal splice variant nPTB3 [Homo sapiens]
gi|119593414|gb|EAW73008.1| polypyrimidine tract binding protein 2, isoform CRA_d [Homo
sapiens]
Length = 537
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 125 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 184
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 177 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 236
Query: 185 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 237 ALDGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 286
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 104/232 (44%), Gaps = 53/232 (22%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 199 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 251
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS----------------GQ 112
I +S +L+VK+ + +SRDYT P LP AI A+ G
Sbjct: 252 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLGLPVAAVPGA 311
Query: 113 LS------------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGP 154
LS VG+ G + +L++++ + VT L +F +G
Sbjct: 312 LSPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGD 369
Query: 155 VQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRH 206
VQ++ + N ALIQ D + +A L G +Y G + ++ S+H
Sbjct: 370 VQRVKIL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIR--VTLSKH 417
>gi|402855348|ref|XP_003892288.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 2 [Papio
anubis]
Length = 506
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 125 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 184
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 146 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 205
Query: 185 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 206 ALDGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 255
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 104/232 (44%), Gaps = 53/232 (22%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 168 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 220
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS----------------GQ 112
I +S +L+VK+ + +SRDYT P LP AI A+ G
Sbjct: 221 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLGLPVAAVPGA 280
Query: 113 LS------------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGP 154
LS VG+ G + +L++++ + VT L +F +G
Sbjct: 281 LSPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGD 338
Query: 155 VQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRH 206
VQ++ + N ALIQ D + +A L G +Y G + ++ S+H
Sbjct: 339 VQRVKIL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIR--VTLSKH 386
>gi|332809593|ref|XP_003308280.1| PREDICTED: polypyrimidine tract-binding protein 2 [Pan troglodytes]
gi|397474051|ref|XP_003808504.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 3 [Pan
paniscus]
Length = 548
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 125 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 184
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 188 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 247
Query: 185 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 248 ALDGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 297
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 102/228 (44%), Gaps = 51/228 (22%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 210 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 262
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS----------------GQ 112
I +S +L+VK+ + +SRDYT P LP AI A+ G
Sbjct: 263 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLGLPVAAVPGA 322
Query: 113 LS------------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGP 154
LS VG+ G + +L++++ + VT L +F +G
Sbjct: 323 LSPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGD 380
Query: 155 VQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 202
VQ++ + N ALIQ D + +A L G +Y G ++ +S
Sbjct: 381 VQRVKIL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLS 426
>gi|297279326|ref|XP_001105013.2| PREDICTED: polypyrimidine tract-binding protein 2-like isoform 2
[Macaca mulatta]
gi|332809591|ref|XP_001158089.2| PREDICTED: polypyrimidine tract-binding protein 2 isoform 7 [Pan
troglodytes]
gi|395730217|ref|XP_003775687.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 2 [Pongo
abelii]
gi|397474049|ref|XP_003808503.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 2 [Pan
paniscus]
gi|426330456|ref|XP_004026227.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 2
[Gorilla gorilla gorilla]
Length = 540
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 125 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 184
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 185 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 244
Query: 185 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 245 ALDGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 294
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 102/223 (45%), Gaps = 46/223 (20%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 207 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 259
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS-----------GQLS--- 114
I +S +L+VK+ + +SRDYT P LP AI A+ G LS
Sbjct: 260 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGALSPLA 319
Query: 115 ---------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA 159
VG+ G + +L++++ + VT L +F +G VQ++
Sbjct: 320 IPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDVQRVK 377
Query: 160 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 202
+ N ALIQ D + +A L G +Y G ++ +S
Sbjct: 378 IL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLS 418
>gi|355558193|gb|EHH14973.1| hypothetical protein EGK_00996, partial [Macaca mulatta]
Length = 529
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 125 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 184
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 174 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 233
Query: 185 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 234 ALDGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 283
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 104/227 (45%), Gaps = 48/227 (21%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 196 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 248
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS-----------GQLS--- 114
I +S +L+VK+ + +SRDYT P LP AI A+ G LS
Sbjct: 249 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGALSPLA 308
Query: 115 ---------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA 159
VG+ G + +L++++ + VT L +F +G VQ++
Sbjct: 309 IPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDVQRVK 366
Query: 160 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRH 206
+ N ALIQ D + +A L G +Y G + ++ S+H
Sbjct: 367 IL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIR--VTLSKH 409
>gi|147856398|emb|CAN82466.1| hypothetical protein VITISV_002663 [Vitis vinifera]
Length = 476
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/215 (35%), Positives = 108/215 (50%), Gaps = 34/215 (15%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCT 72
+LQ+ FG V K+ A QAL+Q D +A SA + Y N+ P
Sbjct: 22 LLQLVHPFGVVTKLVMLR--AKNQALLQMQDVASAVSA--------LQYY---ANVQPSV 68
Query: 73 LRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLAS 132
++ V+F SH+ + Q S G G + + +LL +
Sbjct: 69 ------RGRNVYVQFSSHQE--------------LTTMDQNSQGRKGDQDAQPNRILLVT 108
Query: 133 IENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 192
I ++ Y +T++VLH VFS G V+KI F K+ G QALIQY Q+AV A AL+G IY
Sbjct: 109 IHHLLYPITVEVLHQVFSPHGFVEKIVTFQKSAGFQALIQYQSRQSAVSAINALQGRNIY 168
Query: 193 DGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
D G C+L I +S T+L + NN+RSRD+T PS P
Sbjct: 169 D-GCCQLDIQFSNLTELQVNYNNERSRDFTNPSLP 202
>gi|413933763|gb|AFW68314.1| hypothetical protein ZEAMMB73_143783 [Zea mays]
Length = 445
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/238 (33%), Positives = 114/238 (47%), Gaps = 52/238 (21%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKN-------ALDGRSIPRYLLP 65
+LQ+ FG V KI A Q L+Q D + SA ++ GR++
Sbjct: 22 LLQLLQPFGVVSKIVMLR--AKNQTLLQMEDIHASVSALQYYTSVQPSIRGRNV------ 73
Query: 66 ENMGPCTLRITYSAHTDLSVKFQSH-RSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEP 124
+ +S+H +L+ SH R+ D ++ EP
Sbjct: 74 --------YMQFSSHQELTTDQSSHGRNSD-------------------------QESEP 100
Query: 125 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 184
+ +LL +I +M Y +T++VLH VF A+G V+KI F K+ G QALIQ+ Q AV A
Sbjct: 101 -NRILLVTIHHMIYPITVEVLHQVFKAYGFVEKIVTFQKSAGFQALIQFHSRQEAVEAFG 159
Query: 185 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVP 242
+L G IYDG C+L I YS ++L + NNDRSRD+T PS P +P QQ P
Sbjct: 160 SLHGRNIYDGC-CQLDIQYSNLSELQVHYNNDRSRDFTNPSLP-TEQRPRASQQQAYP 215
>gi|338725424|ref|XP_001490156.3| PREDICTED: polypyrimidine tract-binding protein 2 [Equus caballus]
gi|402855346|ref|XP_003892287.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 1 [Papio
anubis]
gi|194379976|dbj|BAG58340.1| unnamed protein product [Homo sapiens]
Length = 325
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 125 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 184
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 146 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 205
Query: 185 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 206 ALDGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 255
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 53/87 (60%), Gaps = 7/87 (8%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 168 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 220
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLP 101
I +S +L+VK+ + +SRDYT P LP
Sbjct: 221 IDFSKLVNLNVKYNNDKSRDYTRPDLP 247
>gi|149037107|gb|EDL91638.1| ROD1 regulator of differentiation 1 (S. pombe), isoform CRA_a
[Rattus norvegicus]
Length = 528
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 95/197 (48%), Gaps = 34/197 (17%)
Query: 118 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 177
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 173 EGTLLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 232
Query: 178 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILG 237
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 233 NAQYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL-- 289
Query: 238 QQPVPMVGATANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMPMMGNHPYMPPGS 297
E PM AA +GA P S P G + P +
Sbjct: 290 ------------------------EPPM-----AAAFGA--PGIMSSPYAGAAGFAPAIA 318
Query: 298 MPMGPGMMQMHMPGQSG 314
P G+ +PG G
Sbjct: 319 FPQAAGLSVSAVPGALG 335
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 53/89 (59%), Gaps = 7/89 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 202 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAQYAKMALDGQNIYNAC-------CTLR 254
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVA 103
I +S T L+VK+ + +SRD+T LP
Sbjct: 255 IDFSKLTSLNVKYNNDKSRDFTRLDLPTG 283
>gi|355745467|gb|EHH50092.1| hypothetical protein EGM_00861, partial [Macaca fascicularis]
Length = 529
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 125 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 184
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 174 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 233
Query: 185 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 234 ALDGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 283
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 104/227 (45%), Gaps = 48/227 (21%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 196 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 248
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS-----------GQLS--- 114
I +S +L+VK+ + +SRDYT P LP AI A+ G LS
Sbjct: 249 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGALSPLA 308
Query: 115 ---------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA 159
VG+ G + +L++++ + VT L +F +G VQ++
Sbjct: 309 IPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDVQRVK 366
Query: 160 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRH 206
+ N ALIQ D + +A L G +Y G + ++ S+H
Sbjct: 367 IL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIR--VTLSKH 409
>gi|291398459|ref|XP_002715890.1| PREDICTED: polypyrimidine tract binding protein 2 [Oryctolagus
cuniculus]
Length = 536
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 125 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 184
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 177 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 236
Query: 185 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 237 ALDGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 286
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 104/232 (44%), Gaps = 53/232 (22%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 199 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 251
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS----------------GQ 112
I +S +L+VK+ + +SRDYT P LP AI A+ G
Sbjct: 252 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLGLPVAAVPGA 311
Query: 113 LS------------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGP 154
LS VG+ G + +L++++ + VT L +F +G
Sbjct: 312 LSPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGD 369
Query: 155 VQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRH 206
VQ++ + N ALIQ D + +A L G +Y G + ++ S+H
Sbjct: 370 VQRVKIL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIR--VTLSKH 417
>gi|345801647|ref|XP_003434832.1| PREDICTED: polypyrimidine tract-binding protein 2 [Canis lupus
familiaris]
Length = 540
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 125 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 184
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 185 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 244
Query: 185 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 245 ALDGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 294
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 102/223 (45%), Gaps = 46/223 (20%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 207 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 259
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS-----------GQLS--- 114
I +S +L+VK+ + +SRDYT P LP AI A+ G LS
Sbjct: 260 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGALSPLA 319
Query: 115 ---------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA 159
VG+ G + +L++++ + VT L +F +G VQ++
Sbjct: 320 IPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDVQRVK 377
Query: 160 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 202
+ N ALIQ D + +A L G +Y G ++ +S
Sbjct: 378 IL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLS 418
>gi|10863997|ref|NP_067013.1| polypyrimidine tract-binding protein 2 [Homo sapiens]
gi|332221969|ref|XP_003260137.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 1
[Nomascus leucogenys]
gi|332809589|ref|XP_001157727.2| PREDICTED: polypyrimidine tract-binding protein 2 isoform 1 [Pan
troglodytes]
gi|345801645|ref|XP_547270.3| PREDICTED: polypyrimidine tract-binding protein 2 isoform 1 [Canis
lupus familiaris]
gi|397474047|ref|XP_003808502.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 1 [Pan
paniscus]
gi|426330454|ref|XP_004026226.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 1
[Gorilla gorilla gorilla]
gi|74761983|sp|Q9UKA9.1|PTBP2_HUMAN RecName: Full=Polypyrimidine tract-binding protein 2; AltName:
Full=Neural polypyrimidine tract-binding protein;
AltName: Full=Neurally-enriched homolog of PTB; AltName:
Full=PTB-like protein
gi|6492336|gb|AAF14284.1|AF176085_1 neural polypyrimidine tract binding protein [Homo sapiens]
gi|22711855|tpg|DAA00060.1| TPA_exp: splicing regulator nPTB1 [Homo sapiens]
gi|119593411|gb|EAW73005.1| polypyrimidine tract binding protein 2, isoform CRA_a [Homo
sapiens]
gi|380815182|gb|AFE79465.1| polypyrimidine tract-binding protein 2 [Macaca mulatta]
gi|384948520|gb|AFI37865.1| polypyrimidine tract-binding protein 2 [Macaca mulatta]
gi|410298260|gb|JAA27730.1| polypyrimidine tract binding protein 2 [Pan troglodytes]
Length = 531
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 125 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 184
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 177 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 236
Query: 185 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 237 ALDGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 286
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 104/227 (45%), Gaps = 48/227 (21%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 199 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 251
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS-----------GQLS--- 114
I +S +L+VK+ + +SRDYT P LP AI A+ G LS
Sbjct: 252 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGALSPLA 311
Query: 115 ---------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA 159
VG+ G + +L++++ + VT L +F +G VQ++
Sbjct: 312 IPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDVQRVK 369
Query: 160 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRH 206
+ N ALIQ D + +A L G +Y G + ++ S+H
Sbjct: 370 IL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIR--VTLSKH 412
>gi|13879326|gb|AAH06638.1| ROD1 regulator of differentiation 1 (S. pombe) [Mus musculus]
Length = 520
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/209 (37%), Positives = 100/209 (47%), Gaps = 38/209 (18%)
Query: 110 SGQLSV----GLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNG 165
SG LS+ +G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN
Sbjct: 127 SGNLSLPGATANEGTLLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNN 186
Query: 166 GLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 225
QAL+QY D A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T
Sbjct: 187 QFQALLQYADPVNAQYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLD 245
Query: 226 TPMVNSQPSILGQQPVPMVGATANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMP 285
P + QPS+ E PM AA +GA P S P
Sbjct: 246 LPTGDGQPSL--------------------------EPPM-----AAAFGA--PGIMSSP 272
Query: 286 MMGNHPYMPPGSMPMGPGMMQMHMPGQSG 314
G + P + P G+ +PG G
Sbjct: 273 YAGAAGFAPAIAFPQAAGLSVPAVPGALG 301
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 102/234 (43%), Gaps = 68/234 (29%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 168 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAQYAKMALDGQNIYN-------ACCTLR 220
Query: 75 ITYSAHTDLSVKFQSHRSRDYT----------------------------NPY------- 99
I +S T L+VK+ + +SRD+T +PY
Sbjct: 221 IDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSLEPPMAAAFGAPGIMSSPYAGAAGFA 280
Query: 100 ------------LPVAPSAID--------ASGQLSVGLDGKKLEPESNVLLASIENMQYA 139
+P P A+ SG++++ G P ++VLL + N +
Sbjct: 281 PAIAFPQAAGLSVPAVPGALGPLTLTSSAVSGRMAI--PGASGMPGNSVLLVTNLNPDF- 337
Query: 140 VTLDVLHMVFSAFGPVQKIA-MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 192
+T L ++F +G V ++ MF+K AL+Q D A +A L G +Y
Sbjct: 338 ITPHGLFILFGVYGDVHRVKIMFNKKE--NALVQMADASQAQLAMNHLSGQRLY 389
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 81/198 (40%), Gaps = 22/198 (11%)
Query: 11 IFILQVFSAFGFVHKITT-FEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMG 69
+FIL F +G VH++ F K ALVQ +D A A N L G+ + +L
Sbjct: 343 LFIL--FGVYGDVHRVKIMFNKKE--NALVQMADASQAQLAMNHLSGQRLYGKVL----- 393
Query: 70 PCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVL 129
R T S H + + + + T + G + + + P S L
Sbjct: 394 ----RATLSKHQAVQLPREGQEDQGLTKDFSNSPLHRFKKPGSKNF----QNIFPPSATL 445
Query: 130 LASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGH 189
+ N+ +VT+D L +F+ G K F + ALIQ V+ A+ A L H
Sbjct: 446 --HLSNIPPSVTMDDLKNLFTEAGCSVKAFKFFQKDRKMALIQLGSVEEAIQALIELHNH 503
Query: 190 CIYDGGFCKLHISYSRHT 207
+ G L +S+S+ T
Sbjct: 504 DL--GENHHLRVSFSKST 519
>gi|334324359|ref|XP_001381834.2| PREDICTED: polypyrimidine tract-binding protein 2-like [Monodelphis
domestica]
Length = 640
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 125 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 184
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 280 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 339
Query: 185 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 340 ALDGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 389
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 103/232 (44%), Gaps = 53/232 (22%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 302 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 354
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS----------------GQ 112
I +S +L+VK+ + +SRDYT P LP AI A+ G
Sbjct: 355 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLGLPVAAVPGA 414
Query: 113 LS------------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGP 154
LS VG+ G + +L++++ + VT L +F +G
Sbjct: 415 LSPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGD 472
Query: 155 VQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRH 206
VQ++ + N ALIQ D + +A L G +Y + ++ S+H
Sbjct: 473 VQRVKIL-YNKKDSALIQMADGNQSQLAMNHLNGQKMYGK---IIRVTLSKH 520
>gi|194389592|dbj|BAG61757.1| unnamed protein product [Homo sapiens]
Length = 540
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 125 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 184
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 185 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 244
Query: 185 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 245 ALDGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 294
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 102/223 (45%), Gaps = 46/223 (20%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 207 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 259
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS-----------GQLS--- 114
I +S +L+VK+ + +SRDYT P LP AI A+ G LS
Sbjct: 260 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGALSPLA 319
Query: 115 ---------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA 159
VG+ G + +L++++ + VT L +F +G VQ++
Sbjct: 320 IPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDVQRVK 377
Query: 160 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 202
+ N ALIQ D + +A L G +Y G ++ +S
Sbjct: 378 IL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLS 418
>gi|332221975|ref|XP_003260140.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 4
[Nomascus leucogenys]
Length = 568
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 125 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 184
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 208 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 267
Query: 185 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 268 ALDGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 317
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 102/228 (44%), Gaps = 51/228 (22%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 230 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 282
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS----------------GQ 112
I +S +L+VK+ + +SRDYT P LP AI A+ G
Sbjct: 283 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLGLPVAAVPGA 342
Query: 113 LS------------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGP 154
LS VG+ G + +L++++ + VT L +F +G
Sbjct: 343 LSPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGD 400
Query: 155 VQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 202
VQ++ + N ALIQ D + +A L G +Y G ++ +S
Sbjct: 401 VQRVKIL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLS 446
>gi|16580749|dbj|BAB71742.1| PTB-like protein L [Homo sapiens]
gi|16741546|gb|AAH16582.1| Polypyrimidine tract binding protein 2 [Homo sapiens]
gi|119593413|gb|EAW73007.1| polypyrimidine tract binding protein 2, isoform CRA_c [Homo
sapiens]
gi|123980248|gb|ABM81953.1| polypyrimidine tract binding protein 2 [synthetic construct]
gi|157928112|gb|ABW03352.1| polypyrimidine tract binding protein 2 [synthetic construct]
gi|410216174|gb|JAA05306.1| polypyrimidine tract binding protein 2 [Pan troglodytes]
gi|410328831|gb|JAA33362.1| polypyrimidine tract binding protein 2 [Pan troglodytes]
Length = 532
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 125 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 184
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 177 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 236
Query: 185 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 237 ALDGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 286
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 104/227 (45%), Gaps = 48/227 (21%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 199 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 251
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS-----------GQLS--- 114
I +S +L+VK+ + +SRDYT P LP AI A+ G LS
Sbjct: 252 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGALSPLA 311
Query: 115 ---------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA 159
VG+ G + +L++++ + VT L +F +G VQ++
Sbjct: 312 IPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDVQRVK 369
Query: 160 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRH 206
+ N ALIQ D + +A L G +Y G + ++ S+H
Sbjct: 370 IL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIR--VTLSKH 412
>gi|334702289|gb|AEG89704.1| polypyrimidine tract-binding protein 6 [Solanum tuberosum]
Length = 444
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 111/222 (50%), Gaps = 52/222 (23%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETA-------SSAKNALDGRSIPRYLLP 65
+LQ+F FG + K+ A QAL+Q D A S+ + ++ GRS+
Sbjct: 22 LLQLFQPFGVITKLVMLR--AKNQALLQMQDIAAAVNAMQFYSNVQPSIRGRSV------ 73
Query: 66 ENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPE 125
+ +S+H +L+ +D + Q G+ EP
Sbjct: 74 --------YVQFSSHQELT---------------------TVDQNAQ------GRGDEP- 97
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ +LL SI ++ Y +T++VLH VFS G V+KI F K+ G QALIQY QTA+ A+ +
Sbjct: 98 NRILLVSIHHVLYPITVEVLHQVFSPHGIVEKIVTFQKSAGFQALIQYELTQTAISARNS 157
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
L+G IYD G C+L I +S +L + NN+R RD+T P+ P
Sbjct: 158 LQGRNIYD-GCCQLDIQFSNLDELQVSYNNERPRDFTNPNLP 198
>gi|326925087|ref|XP_003208753.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Meleagris
gallopavo]
Length = 531
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 125 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 184
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 177 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 236
Query: 185 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 237 ALDGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 286
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 102/223 (45%), Gaps = 46/223 (20%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 199 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 251
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS-----------GQLS--- 114
I +S +L+VK+ + +SRDYT P LP AI A+ G LS
Sbjct: 252 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGALSPLA 311
Query: 115 ---------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA 159
VG+ G + +L++++ + VT L +F +G VQ++
Sbjct: 312 IPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDVQRVK 369
Query: 160 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 202
+ N ALIQ D + +A L G +Y G ++ +S
Sbjct: 370 IL-YNKKDSALIQMADGNQSQLAMSHLNGQKMY-GKIIRVTLS 410
>gi|327270713|ref|XP_003220133.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Anolis
carolinensis]
Length = 531
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 125 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 184
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 177 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 236
Query: 185 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 237 ALDGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 286
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/223 (33%), Positives = 101/223 (45%), Gaps = 46/223 (20%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 199 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 251
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS-----------GQLS--- 114
I +S +L+VK+ + +SRDYT P LP AI A+ G LS
Sbjct: 252 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGALSPLG 311
Query: 115 ---------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA 159
VG+ G + VLL S N + VT L +F +G VQ++
Sbjct: 312 IPNAAAAAAAAAAGRVGMPGVS-SGGNTVLLVSNLN-EEMVTPQSLFTLFGVYGDVQRVK 369
Query: 160 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 202
+ N ALIQ D + +A L G +Y G ++ +S
Sbjct: 370 IL-YNKKDSALIQMADGNQSQLAMSHLNGQKMY-GKIIRVTLS 410
>gi|118094291|ref|XP_422322.2| PREDICTED: polypyrimidine tract-binding protein 2 [Gallus gallus]
Length = 531
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 125 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 184
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 177 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 236
Query: 185 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 237 ALDGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 286
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 102/223 (45%), Gaps = 46/223 (20%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 199 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 251
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS-----------GQLS--- 114
I +S +L+VK+ + +SRDYT P LP AI A+ G LS
Sbjct: 252 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGALSPLA 311
Query: 115 ---------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA 159
VG+ G + +L++++ + VT L +F +G VQ++
Sbjct: 312 IPNAAAAAAAAAAGRVGMPGVSASGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDVQRVK 369
Query: 160 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 202
+ N ALIQ D + +A L G +Y G ++ +S
Sbjct: 370 IL-YNKKDSALIQMADGNQSQLAMSHLNGQKMY-GKIIRVTLS 410
>gi|16580751|dbj|BAB71743.1| PTB-like protein S [Homo sapiens]
gi|119593415|gb|EAW73009.1| polypyrimidine tract binding protein 2, isoform CRA_e [Homo
sapiens]
Length = 356
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 125 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 184
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 177 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 236
Query: 185 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 237 ALDGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 286
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 53/87 (60%), Gaps = 7/87 (8%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 199 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 251
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLP 101
I +S +L+VK+ + +SRDYT P LP
Sbjct: 252 IDFSKLVNLNVKYNNDKSRDYTRPDLP 278
>gi|403283993|ref|XP_003933374.1| PREDICTED: polypyrimidine tract-binding protein 2 [Saimiri
boliviensis boliviensis]
Length = 577
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 125 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 184
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 222 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 281
Query: 185 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 282 ALDGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 331
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 102/223 (45%), Gaps = 46/223 (20%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 244 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 296
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS-----------GQLS--- 114
I +S +L+VK+ + +SRDYT P LP AI A+ G LS
Sbjct: 297 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGALSPLA 356
Query: 115 ---------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA 159
VG+ G + +L++++ + VT L +F +G VQ++
Sbjct: 357 IPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDVQRVK 414
Query: 160 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 202
+ N ALIQ D + +A L G +Y G ++ +S
Sbjct: 415 IL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLS 455
>gi|30039680|ref|NP_835458.1| polypyrimidine tract-binding protein 3 isoform 2 [Mus musculus]
gi|50401558|sp|Q8BHD7.1|PTBP3_MOUSE RecName: Full=Polypyrimidine tract-binding protein 3; AltName:
Full=Regulator of differentiation 1; Short=Rod1
gi|26329429|dbj|BAC28453.1| unnamed protein product [Mus musculus]
gi|26353590|dbj|BAC40425.1| unnamed protein product [Mus musculus]
gi|34785867|gb|AAH57641.1| ROD1 regulator of differentiation 1 (S. pombe) [Mus musculus]
Length = 523
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/209 (37%), Positives = 100/209 (47%), Gaps = 38/209 (18%)
Query: 110 SGQLSV----GLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNG 165
SG LS+ +G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN
Sbjct: 130 SGNLSLPGATANEGTLLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNN 189
Query: 166 GLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 225
QAL+QY D A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T
Sbjct: 190 QFQALLQYADPVNAQYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLD 248
Query: 226 TPMVNSQPSILGQQPVPMVGATANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMP 285
P + QPS+ E PM AA +GA P S P
Sbjct: 249 LPTGDGQPSL--------------------------EPPM-----AAAFGA--PGIMSSP 275
Query: 286 MMGNHPYMPPGSMPMGPGMMQMHMPGQSG 314
G + P + P G+ +PG G
Sbjct: 276 YAGAAGFAPAIAFPQAAGLSVPAVPGALG 304
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 102/234 (43%), Gaps = 68/234 (29%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 171 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAQYAKMALDGQNIYN-------ACCTLR 223
Query: 75 ITYSAHTDLSVKFQSHRSRDYT----------------------------NPY------- 99
I +S T L+VK+ + +SRD+T +PY
Sbjct: 224 IDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSLEPPMAAAFGAPGIMSSPYAGAAGFA 283
Query: 100 ------------LPVAPSAID--------ASGQLSVGLDGKKLEPESNVLLASIENMQYA 139
+P P A+ SG++++ G P ++VLL + N +
Sbjct: 284 PAIAFPQAAGLSVPAVPGALGPLTLTSSAVSGRMAI--PGASGMPGNSVLLVTNLNPDF- 340
Query: 140 VTLDVLHMVFSAFGPVQKIA-MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 192
+T L ++F +G V ++ MF+K AL+Q D A +A L G +Y
Sbjct: 341 ITPHGLFILFGVYGDVHRVKIMFNKKE--NALVQMADASQAQLAMNHLSGQRLY 392
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 81/198 (40%), Gaps = 22/198 (11%)
Query: 11 IFILQVFSAFGFVHKITT-FEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMG 69
+FIL F +G VH++ F K ALVQ +D A A N L G+ + +L
Sbjct: 346 LFIL--FGVYGDVHRVKIMFNKKE--NALVQMADASQAQLAMNHLSGQRLYGKVL----- 396
Query: 70 PCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVL 129
R T S H + + + + T + G + + + P S L
Sbjct: 397 ----RATLSKHQAVQLPREGQEDQGLTKDFSNSPLHRFKKPGSKNF----QNIFPPSATL 448
Query: 130 LASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGH 189
+ N+ +VT+D L +F+ G K F + ALIQ V+ A+ A L H
Sbjct: 449 --HLSNIPPSVTMDDLKNLFTEAGCSVKAFKFFQKDRKMALIQLGSVEEAIQALIELHNH 506
Query: 190 CIYDGGFCKLHISYSRHT 207
+ G L +S+S+ T
Sbjct: 507 DL--GENHHLRVSFSKST 522
>gi|395535423|ref|XP_003769725.1| PREDICTED: polypyrimidine tract-binding protein 2 [Sarcophilus
harrisii]
Length = 494
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 125 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 184
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 139 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 198
Query: 185 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 199 ALDGQNIYNAC-CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 248
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 102/223 (45%), Gaps = 46/223 (20%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 161 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 213
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS-----------GQLS--- 114
I +S +L+VK+ + +SRDYT P LP AI A+ G LS
Sbjct: 214 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGALSPLA 273
Query: 115 ---------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA 159
VG+ G + +L++++ + VT L +F +G VQ++
Sbjct: 274 IPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDVQRVK 331
Query: 160 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 202
+ N ALIQ D + +A L G +Y G ++ +S
Sbjct: 332 IL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLS 372
>gi|345306392|ref|XP_001508115.2| PREDICTED: polypyrimidine tract-binding protein 2-like
[Ornithorhynchus anatinus]
Length = 606
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 125 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 184
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 251 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 310
Query: 185 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 311 ALDGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 360
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 102/223 (45%), Gaps = 46/223 (20%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 273 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 325
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS-----------GQLS--- 114
I +S +L+VK+ + +SRDYT P LP AI A+ G LS
Sbjct: 326 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGALSPLA 385
Query: 115 ---------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA 159
VGL G + +L++++ + VT L +F +G VQ++
Sbjct: 386 IPNAAAAAAAAAAGRVGLPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDVQRVK 443
Query: 160 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 202
+ N ALIQ D + +A L G +Y G ++ +S
Sbjct: 444 IL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLS 484
>gi|300681487|emb|CBH32581.1| RNA recognition domain containing protein [Triticum aestivum]
Length = 277
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/256 (34%), Positives = 122/256 (47%), Gaps = 54/256 (21%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRY--LLPENMGP 70
+LQV FG V K+ QALVQ D + SA I Y + P G
Sbjct: 22 LLQVVQPFGAVAKLVMLRTKN--QALVQMEDLSASISA--------IQYYTTIQPSVRGR 71
Query: 71 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLL 130
+ + YS+H +L+ SH G + + EP + +LL
Sbjct: 72 -NVYLQYSSHQELTTDQSSH-------------------------GRNPDQDEP-NRILL 104
Query: 131 ASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHC 190
++ +M Y +T++VLH VFS +G V+KI F K G QALIQ+ Q+A+ A AL G
Sbjct: 105 VTVHHMLYPMTVEVLHQVFSPYGFVEKIVTFQKTAGFQALIQFQSRQSAIQAAGALHGRN 164
Query: 191 IYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP---------MVNSQPSILG-QQP 240
IYDG C+L I YS ++L + NNDRSRD+T PS P + + PS+ G QQP
Sbjct: 165 IYDGC-CQLDIQYSNLSELQVHYNNDRSRDFTNPSLPTEQRPRSSQLGYNDPSLFGFQQP 223
Query: 241 VPMVGATANQYNGAQF 256
G A Q++ F
Sbjct: 224 ----GGKALQFSFTFF 235
>gi|395750059|ref|XP_003779055.1| PREDICTED: LOW QUALITY PROTEIN: polypyrimidine tract-binding
protein 1 [Pongo abelii]
Length = 782
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/144 (45%), Positives = 84/144 (58%), Gaps = 6/144 (4%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 399 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 458
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 238
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P QP++
Sbjct: 459 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPS-GRQPALAWD 516
Query: 239 Q---PVPMVGA-TANQYNGAQFAP 258
Q P P +A+ Y GA F P
Sbjct: 517 QNHGPRPXXXXISASPYAGAGFPP 540
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 55/87 (63%), Gaps = 7/87 (8%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 427 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYNAC-------CTLR 479
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLP 101
I +S T L+VK+ + +SRDYT P LP
Sbjct: 480 IDFSKLTSLNVKYNNDKSRDYTRPDLP 506
>gi|118404352|ref|NP_001072479.1| polypyrimidine tract binding protein 2 [Xenopus (Silurana)
tropicalis]
gi|112418598|gb|AAI21904.1| polypyrimidine tract binding protein 2 [Xenopus (Silurana)
tropicalis]
Length = 531
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 125 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 184
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 177 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYGDPVNAQQAKL 236
Query: 185 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 237 ALDGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 286
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 102/223 (45%), Gaps = 46/223 (20%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 199 QIFSKFGTVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 251
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS-----------GQLS--- 114
I +S +L+VK+ + +SRDYT P LP AI A+ G LS
Sbjct: 252 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGALSPLG 311
Query: 115 ---------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA 159
VG+ G + +L++++ + V+ L +F +G VQ++
Sbjct: 312 IPNAAAAAAAAAASRVGMHGVSTGGNTVLLVSNLN--EEMVSPQSLFTLFGVYGDVQRVK 369
Query: 160 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 202
+ N ALIQ D + +A L G +Y G ++ +S
Sbjct: 370 IL-YNKKDSALIQMADGNQSQLAMSHLNGQKMY-GKIIRVTLS 410
>gi|355717047|gb|AES05805.1| ROD1 regulator of differentiation 1 [Mustela putorius furo]
Length = 497
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/170 (43%), Positives = 93/170 (54%), Gaps = 16/170 (9%)
Query: 118 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 177
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 117 EGTILPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 176
Query: 178 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILG 237
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 177 NAHYAKMALDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL-- 233
Query: 238 QQPVPMV------GATANQYNGAQ-FAPPPPEQPMMHQPTAAGWGAVPPA 280
+P PM G ++ Y GA FAP HQ T AVP A
Sbjct: 234 -EP-PMAAAFGAPGIISSPYAGAAGFAPAIG----FHQATGLSVPAVPGA 277
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 53/87 (60%), Gaps = 7/87 (8%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 146 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYN-------ACCTLR 198
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLP 101
I +S T L+VK+ + +SRD+T LP
Sbjct: 199 IDFSKLTSLNVKYNNDKSRDFTRLDLP 225
Score = 38.1 bits (87), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 80/198 (40%), Gaps = 22/198 (11%)
Query: 11 IFILQVFSAFGFVHKITT-FEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMG 69
+FIL F +G VH++ F K ALVQ +D A A N L G + +
Sbjct: 321 LFIL--FGVYGDVHRVKIMFNKKE--NALVQMADASQAQLAMNHLSG---------QRLY 367
Query: 70 PCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVL 129
LR T S H + + + + T + G + + + P S L
Sbjct: 368 GKVLRATLSKHQAVQLPREGQEDQGLTKDFSNSPLHRFKKPGSKNF----QNIFPPSATL 423
Query: 130 LASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGH 189
+ N+ +VT+D L +F+ G K F + ALIQ V+ A+ A L H
Sbjct: 424 --HLSNIPPSVTVDDLKNLFTEAGCSVKAFKFFQKDRKMALIQLGSVEEAIQALIELHNH 481
Query: 190 CIYDGGFCKLHISYSRHT 207
+ G L +S+S+ T
Sbjct: 482 DL--GENHHLRVSFSKST 497
>gi|115441273|ref|NP_001044916.1| Os01g0867800 [Oryza sativa Japonica Group]
gi|113534447|dbj|BAF06830.1| Os01g0867800 [Oryza sativa Japonica Group]
gi|215697244|dbj|BAG91238.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 439
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/142 (44%), Positives = 85/142 (59%), Gaps = 6/142 (4%)
Query: 97 NPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQ 156
N YL + + Q S G + + EP + +LL +I +M Y +T++VLH VFS +G V+
Sbjct: 68 NVYLQYSSHQELTTDQSSHGRNPDQEEP-NRILLVTIHHMLYPITIEVLHQVFSPYGFVE 126
Query: 157 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 216
KI F K+ G Q LIQY Q+A+ A AL G IYDG C+L I YS ++L + NND
Sbjct: 127 KIVTFQKSAGFQTLIQYQSRQSAIQAYGALHGRNIYDGC-CQLDIQYSNLSELQVHYNND 185
Query: 217 RSRDYTLPSTPM----VNSQPS 234
RSRD+T PS P +SQPS
Sbjct: 186 RSRDFTNPSLPTEQRSRSSQPS 207
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/247 (32%), Positives = 116/247 (46%), Gaps = 45/247 (18%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
QVFS +GFV KI TF+K+AGFQ L+Q+ ++A A AL GR+I G C L
Sbjct: 117 QVFSPYGFVEKIVTFQKSAGFQTLIQYQSRQSAIQAYGALHGRNIYD-------GCCQLD 169
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVA------------PSAI-------DASGQLS- 114
I YS ++L V + + RSRD+TNP LP PS++ D Q+S
Sbjct: 170 IQYSNLSELQVHYNNDRSRDFTNPSLPTEQRSRSSQPSYNDPSSLFGFQQPGDPYAQMSK 229
Query: 115 ----VGLDGKKLEP------ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKN 164
G L P + LL S N + D L +FS +G + +I + KN
Sbjct: 230 AAMIAAAFGGTLPPGVSGINDRCTLLVSNLNTD-KIDEDKLFNLFSMYGNIVRIKIL-KN 287
Query: 165 GGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP 224
ALIQ D A +A L+G ++ KL ++YS++ ++ + +RDY+
Sbjct: 288 KPDHALIQMADGLQAELAVLYLKGAMLFGK---KLEVNYSKYPTVTADPD---ARDYSTS 341
Query: 225 STPMVNS 231
NS
Sbjct: 342 HLNRFNS 348
>gi|255003709|ref|NP_659153.2| polypyrimidine tract-binding protein 3 isoform 1 [Mus musculus]
Length = 551
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/219 (39%), Positives = 112/219 (51%), Gaps = 36/219 (16%)
Query: 110 SGQLSV----GLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNG 165
SG LS+ +G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN
Sbjct: 158 SGNLSLPGATANEGTLLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNN 217
Query: 166 GLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 225
QAL+QY D A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T
Sbjct: 218 QFQALLQYADPVNAQYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLD 276
Query: 226 TPMVNSQPSILGQQPVPMV------GATANQYNGAQ-FAPPPPEQPMMHQPTAAGWG--A 276
P + QPS+ +P PM G ++ Y GA FAP + P AAG A
Sbjct: 277 LPTGDGQPSL---EP-PMAAAFGAPGIMSSPYAGAAGFAPA------IAFPQAAGLSVPA 326
Query: 277 VPPASQSMPMMGNHPYMPPGSMPMGPGMMQMHMPGQSGM 315
VP A + P ++ +M +PG SGM
Sbjct: 327 VPGA------------LGPLTLTSSAVSGRMAIPGASGM 353
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 102/234 (43%), Gaps = 68/234 (29%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 199 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAQYAKMALDGQNIYN-------ACCTLR 251
Query: 75 ITYSAHTDLSVKFQSHRSRDYT----------------------------NPY------- 99
I +S T L+VK+ + +SRD+T +PY
Sbjct: 252 IDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSLEPPMAAAFGAPGIMSSPYAGAAGFA 311
Query: 100 ------------LPVAPSAID--------ASGQLSVGLDGKKLEPESNVLLASIENMQYA 139
+P P A+ SG++++ G P ++VLL + N +
Sbjct: 312 PAIAFPQAAGLSVPAVPGALGPLTLTSSAVSGRMAI--PGASGMPGNSVLLVTNLNPDF- 368
Query: 140 VTLDVLHMVFSAFGPVQKIA-MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 192
+T L ++F +G V ++ MF+K AL+Q D A +A L G +Y
Sbjct: 369 ITPHGLFILFGVYGDVHRVKIMFNKKE--NALVQMADASQAQLAMNHLSGQRLY 420
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 81/198 (40%), Gaps = 22/198 (11%)
Query: 11 IFILQVFSAFGFVHKITT-FEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMG 69
+FIL F +G VH++ F K ALVQ +D A A N L G+ + +L
Sbjct: 374 LFIL--FGVYGDVHRVKIMFNKKE--NALVQMADASQAQLAMNHLSGQRLYGKVL----- 424
Query: 70 PCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVL 129
R T S H + + + + T + G + + + P S L
Sbjct: 425 ----RATLSKHQAVQLPREGQEDQGLTKDFSNSPLHRFKKPGSKNF----QNIFPPSATL 476
Query: 130 LASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGH 189
+ N+ +VT+D L +F+ G K F + ALIQ V+ A+ A L H
Sbjct: 477 --HLSNIPPSVTMDDLKNLFTEAGCSVKAFKFFQKDRKMALIQLGSVEEAIQALIELHNH 534
Query: 190 CIYDGGFCKLHISYSRHT 207
+ G L +S+S+ T
Sbjct: 535 DL--GENHHLRVSFSKST 550
>gi|148670261|gb|EDL02208.1| ROD1 regulator of differentiation 1 (S. pombe), isoform CRA_a [Mus
musculus]
Length = 528
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/219 (39%), Positives = 112/219 (51%), Gaps = 36/219 (16%)
Query: 110 SGQLSV----GLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNG 165
SG LS+ +G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN
Sbjct: 161 SGNLSLPGATANEGTLLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNN 220
Query: 166 GLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 225
QAL+QY D A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T
Sbjct: 221 QFQALLQYADPVNAQYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLD 279
Query: 226 TPMVNSQPSILGQQPVPMV------GATANQYNGAQ-FAPPPPEQPMMHQPTAAGWG--A 276
P + QPS+ +P PM G ++ Y GA FAP + P AAG A
Sbjct: 280 LPTGDGQPSL---EP-PMAAAFGAPGIMSSPYAGAAGFAPA------IAFPQAAGLSVPA 329
Query: 277 VPPASQSMPMMGNHPYMPPGSMPMGPGMMQMHMPGQSGM 315
VP A + P ++ +M +PG SGM
Sbjct: 330 VPGA------------LGPLTLTSSAVSGRMAIPGASGM 356
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 102/234 (43%), Gaps = 68/234 (29%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 202 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAQYAKMALDGQNIYN-------ACCTLR 254
Query: 75 ITYSAHTDLSVKFQSHRSRDYT----------------------------NPY------- 99
I +S T L+VK+ + +SRD+T +PY
Sbjct: 255 IDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSLEPPMAAAFGAPGIMSSPYAGAAGFA 314
Query: 100 ------------LPVAPSAID--------ASGQLSVGLDGKKLEPESNVLLASIENMQYA 139
+P P A+ SG++++ G P ++VLL + N +
Sbjct: 315 PAIAFPQAAGLSVPAVPGALGPLTLTSSAVSGRMAI--PGASGMPGNSVLLVTNLNPDF- 371
Query: 140 VTLDVLHMVFSAFGPVQKIA-MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 192
+T L ++F +G V ++ MF+K AL+Q D A +A L G +Y
Sbjct: 372 ITPHGLFILFGVYGDVHRVKIMFNKKE--NALVQMADASQAQLAMNHLSGQRLY 423
>gi|148670262|gb|EDL02209.1| ROD1 regulator of differentiation 1 (S. pombe), isoform CRA_b [Mus
musculus]
Length = 590
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/209 (37%), Positives = 100/209 (47%), Gaps = 38/209 (18%)
Query: 110 SGQLSV----GLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNG 165
SG LS+ +G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN
Sbjct: 197 SGNLSLPGATANEGTLLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNN 256
Query: 166 GLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 225
QAL+QY D A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T
Sbjct: 257 QFQALLQYADPVNAQYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLD 315
Query: 226 TPMVNSQPSILGQQPVPMVGATANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMP 285
P + QPS+ E PM AA +GA P S P
Sbjct: 316 LPTGDGQPSL--------------------------EPPM-----AAAFGA--PGIMSSP 342
Query: 286 MMGNHPYMPPGSMPMGPGMMQMHMPGQSG 314
G + P + P G+ +PG G
Sbjct: 343 YAGAAGFAPAIAFPQAAGLSVPAVPGALG 371
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 102/234 (43%), Gaps = 68/234 (29%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 238 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAQYAKMALDGQNIYNAC-------CTLR 290
Query: 75 ITYSAHTDLSVKFQSHRSRDYT----------------------------NPY------- 99
I +S T L+VK+ + +SRD+T +PY
Sbjct: 291 IDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSLEPPMAAAFGAPGIMSSPYAGAAGFA 350
Query: 100 ------------LPVAPSAID--------ASGQLSVGLDGKKLEPESNVLLASIENMQYA 139
+P P A+ SG++++ G P ++VLL + N +
Sbjct: 351 PAIAFPQAAGLSVPAVPGALGPLTLTSSAVSGRMAI--PGASGMPGNSVLLVTNLNPDF- 407
Query: 140 VTLDVLHMVFSAFGPVQKIA-MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 192
+T L ++F +G V ++ MF+K AL+Q D A +A L G +Y
Sbjct: 408 ITPHGLFILFGVYGDVHRVKIMFNKKE--NALVQMADASQAQLAMNHLSGQRLY 459
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 81/198 (40%), Gaps = 22/198 (11%)
Query: 11 IFILQVFSAFGFVHKITT-FEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMG 69
+FIL F +G VH++ F K ALVQ +D A A N L G+ + +L
Sbjct: 413 LFIL--FGVYGDVHRVKIMFNKKE--NALVQMADASQAQLAMNHLSGQRLYGKVL----- 463
Query: 70 PCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVL 129
R T S H + + + + T + G + + + P S L
Sbjct: 464 ----RATLSKHQAVQLPREGQEDQGLTKDFSNSPLHRFKKPGSKNF----QNIFPPSATL 515
Query: 130 LASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGH 189
+ N+ +VT+D L +F+ G K F + ALIQ V+ A+ A L H
Sbjct: 516 --HLSNIPPSVTMDDLKNLFTEAGCSVKAFKFFQKDRKMALIQLGSVEEAIQALIELHNH 573
Query: 190 CIYDGGFCKLHISYSRHT 207
+ G L +S+S+ T
Sbjct: 574 DL--GENHHLRVSFSKST 589
>gi|268532214|ref|XP_002631235.1| C. briggsae CBR-PTB-1 protein [Caenorhabditis briggsae]
Length = 610
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 86/145 (59%), Gaps = 2/145 (1%)
Query: 83 LSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTL 142
L ++ +HR + + + A+G +S G + +P S VL IENM + V+L
Sbjct: 184 LFAQYSTHRELKFDKSNKATSDTESVANGSVSNFEVGTQQQPNS-VLRTIIENMMFPVSL 242
Query: 143 DVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 202
+VLH +F+ +G V +I F+KN QALIQ + +A +AK+ LE +Y+G C L I
Sbjct: 243 EVLHQLFARYGKVLRIITFNKNNTFQALIQMSEANSAQLAKQGLENQNVYNGC-CTLRID 301
Query: 203 YSRHTDLSIKVNNDRSRDYTLPSTP 227
YS+ + L++K NND+SRDYT P+ P
Sbjct: 302 YSKLSTLNVKYNNDKSRDYTNPNLP 326
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 9/102 (8%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+F+ +G V +I TF K FQAL+Q S+ +A AK L+ +++ G CTLR
Sbjct: 247 QLFARYGKVLRIITFNKNNTFQALIQMSEANSAQLAKQGLENQNVYN-------GCCTLR 299
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVG 116
I YS + L+VK+ + +SRDYTNP LP P + Q+++
Sbjct: 300 IDYSKLSTLNVKYNNDKSRDYTNPNLP--PGEMTLEQQIAIS 339
>gi|170576691|ref|XP_001893730.1| hypothetical protein [Brugia malayi]
gi|158600096|gb|EDP37433.1| conserved hypothetical protein [Brugia malayi]
Length = 645
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 87/149 (58%), Gaps = 12/149 (8%)
Query: 102 VAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMF 161
++ SA+D S + +P S VL IENM Y VTLDVLH +FS +G V +I F
Sbjct: 398 ISASALDISA-------CTQQQPNS-VLRVIIENMLYPVTLDVLHQIFSRYGKVLRIITF 449
Query: 162 DKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDY 221
+KN QAL+Q + +A +A+++L+G +Y+G C L I YS+ L++K NND+SRDY
Sbjct: 450 NKNNTFQALVQLSEANSAQLARQSLDGQNVYNGCCC-LRIDYSKLATLNVKYNNDKSRDY 508
Query: 222 TLPSTPMVNSQPSILGQQPVPMVGATANQ 250
T P+ P S L QQ + AT Q
Sbjct: 509 TNPNLP---SGELTLEQQLSLVSAATGGQ 534
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 64/118 (54%), Gaps = 7/118 (5%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS +G V +I TF K FQALVQ S+ +A A+ +LDG+++ G C LR
Sbjct: 435 QIFSRYGKVLRIITFNKNNTFQALVQLSEANSAQLARQSLDGQNVYN-------GCCCLR 487
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLAS 132
I YS L+VK+ + +SRDYTNP LP ++ L G ++ P L+ S
Sbjct: 488 IDYSKLATLNVKYNNDKSRDYTNPNLPSGELTLEQQLSLVSAATGGQMGPTIASLVQS 545
>gi|345777899|ref|XP_538790.3| PREDICTED: regulator of differentiation 1 [Canis lupus familiaris]
Length = 610
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/170 (43%), Positives = 93/170 (54%), Gaps = 16/170 (9%)
Query: 118 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 177
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 229 EGTILPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 288
Query: 178 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILG 237
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 289 NAHYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL-- 345
Query: 238 QQPVPMV------GATANQYNGAQ-FAPPPPEQPMMHQPTAAGWGAVPPA 280
+P PM G ++ Y GA FAP HQ T AVP A
Sbjct: 346 -EP-PMAAAFGAPGIISSPYAGAAGFAPAIG----FHQATGISVPAVPGA 389
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 53/89 (59%), Gaps = 7/89 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 258 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYN-------ACCTLR 310
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVA 103
I +S T L+VK+ + +SRD+T LP
Sbjct: 311 IDFSKLTSLNVKYNNDKSRDFTRLDLPTG 339
Score = 37.7 bits (86), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 81/198 (40%), Gaps = 22/198 (11%)
Query: 11 IFILQVFSAFGFVHKITT-FEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMG 69
+FIL F +G VH++ F K ALVQ +D A A N L G+ + +L
Sbjct: 433 LFIL--FGVYGDVHRVKIMFNKKE--NALVQMADANQAQLAMNHLSGQRLYGKVL----- 483
Query: 70 PCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVL 129
R T S H + + + + T + G + + + P S L
Sbjct: 484 ----RATLSKHQAVQLPREGQEDQGLTKDFSNSPLHRFKKPGSKNF----QNIFPPSATL 535
Query: 130 LASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGH 189
+ N+ +VT+D L +F+ G K F + ALIQ V+ A+ A L H
Sbjct: 536 --HLSNIPPSVTVDDLKNLFTEAGCSVKAFKFFQKDRKMALIQLGSVEEAIQALIELHNH 593
Query: 190 CIYDGGFCKLHISYSRHT 207
+ G L +S+S+ T
Sbjct: 594 DL--GENHHLRVSFSKST 609
>gi|148670263|gb|EDL02210.1| ROD1 regulator of differentiation 1 (S. pombe), isoform CRA_c [Mus
musculus]
Length = 556
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/209 (37%), Positives = 100/209 (47%), Gaps = 38/209 (18%)
Query: 110 SGQLSV----GLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNG 165
SG LS+ +G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN
Sbjct: 163 SGNLSLPGATANEGTLLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNN 222
Query: 166 GLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 225
QAL+QY D A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T
Sbjct: 223 QFQALLQYADPVNAQYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLD 281
Query: 226 TPMVNSQPSILGQQPVPMVGATANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMP 285
P + QPS+ E PM AA +GA P S P
Sbjct: 282 LPTGDGQPSL--------------------------EPPM-----AAAFGA--PGIMSSP 308
Query: 286 MMGNHPYMPPGSMPMGPGMMQMHMPGQSG 314
G + P + P G+ +PG G
Sbjct: 309 YAGAAGFAPAIAFPQAAGLSVPAVPGALG 337
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 102/234 (43%), Gaps = 68/234 (29%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 204 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAQYAKMALDGQNIYN-------ACCTLR 256
Query: 75 ITYSAHTDLSVKFQSHRSRDYT----------------------------NPY------- 99
I +S T L+VK+ + +SRD+T +PY
Sbjct: 257 IDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSLEPPMAAAFGAPGIMSSPYAGAAGFA 316
Query: 100 ------------LPVAPSAID--------ASGQLSVGLDGKKLEPESNVLLASIENMQYA 139
+P P A+ SG++++ G P ++VLL + N +
Sbjct: 317 PAIAFPQAAGLSVPAVPGALGPLTLTSSAVSGRMAI--PGASGMPGNSVLLVTNLNPDF- 373
Query: 140 VTLDVLHMVFSAFGPVQKIA-MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 192
+T L ++F +G V ++ MF+K AL+Q D A +A L G +Y
Sbjct: 374 ITPHGLFILFGVYGDVHRVKIMFNKKE--NALVQMADASQAQLAMNHLSGQRLY 425
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 81/198 (40%), Gaps = 22/198 (11%)
Query: 11 IFILQVFSAFGFVHKITT-FEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMG 69
+FIL F +G VH++ F K ALVQ +D A A N L G+ + +L
Sbjct: 379 LFIL--FGVYGDVHRVKIMFNKKE--NALVQMADASQAQLAMNHLSGQRLYGKVL----- 429
Query: 70 PCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVL 129
R T S H + + + + T + G + + + P S L
Sbjct: 430 ----RATLSKHQAVQLPREGQEDQGLTKDFSNSPLHRFKKPGSKNF----QNIFPPSATL 481
Query: 130 LASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGH 189
+ N+ +VT+D L +F+ G K F + ALIQ V+ A+ A L H
Sbjct: 482 --HLSNIPPSVTMDDLKNLFTEAGCSVKAFKFFQKDRKMALIQLGSVEEAIQALIELHNH 539
Query: 190 CIYDGGFCKLHISYSRHT 207
+ G L +S+S+ T
Sbjct: 540 DL--GENHHLRVSFSKST 555
>gi|281345981|gb|EFB21565.1| hypothetical protein PANDA_015565 [Ailuropoda melanoleuca]
Length = 444
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/170 (43%), Positives = 93/170 (54%), Gaps = 16/170 (9%)
Query: 118 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 177
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 132 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGAVLKIITFTKNNQFQALLQYADPV 191
Query: 178 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILG 237
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 192 NAHYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL-- 248
Query: 238 QQPVPMV------GATANQYNGAQ-FAPPPPEQPMMHQPTAAGWGAVPPA 280
+P PM G ++ Y GA FAP HQ T AVP A
Sbjct: 249 -EP-PMAAAFGAPGIISSPYAGAAGFAP----AIGFHQATGLSVPAVPGA 292
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 53/89 (59%), Gaps = 7/89 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 161 QIFSKFGAVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYNAC-------CTLR 213
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVA 103
I +S T L+VK+ + +SRD+T LP
Sbjct: 214 IDFSKLTSLNVKYNNDKSRDFTRLDLPTG 242
>gi|224089408|ref|XP_002188238.1| PREDICTED: polypyrimidine tract-binding protein 3 [Taeniopygia
guttata]
Length = 488
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/109 (45%), Positives = 71/109 (65%), Gaps = 1/109 (0%)
Query: 127 NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEAL 186
+VL +EN+ Y VTLD+L+ +FS FG V +I MF KN Q+L+QY D A AK +L
Sbjct: 147 SVLRIIVENVFYPVTLDILYQIFSKFGFVLRIIMFHKNNQFQSLLQYSDAMNAYYAKMSL 206
Query: 187 EGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
+GHCIY G C L I +S+ +L++K NND+SRD+T P + Q ++
Sbjct: 207 DGHCIYTGC-CTLRIEFSKLANLTVKYNNDKSRDFTRIDLPFGDGQRTV 254
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 100/203 (49%), Gaps = 31/203 (15%)
Query: 12 FILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPC 71
+ Q+FS FGFV +I F K FQ+L+Q+SD A AK +LDG I G C
Sbjct: 164 ILYQIFSKFGFVLRIIMFHKNNQFQSLLQYSDAMNAYYAKMSLDGHCI-------YTGCC 216
Query: 72 TLRITYSAHTDLSVKFQSHRSRDYTN---PY----------LPVAPSAIDASGQL----- 113
TLRI +S +L+VK+ + +SRD+T P+ +P PS + G L
Sbjct: 217 TLRIEFSKLANLTVKYNNDKSRDFTRIDLPFGDGQRTVETSIPFGPSVLPVPGALGPLMV 276
Query: 114 -SVGLDGKKLEPE---SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQA 169
+ G P+ ++VLL S N + A+T L ++F +G V ++ + K G+ A
Sbjct: 277 TTSAAPGHMTIPDIPGNSVLLVSNLNPE-AITPYGLFILFGVYGDVHRVKIMFKKRGI-A 334
Query: 170 LIQYPDVQTAVVAKEALEGHCIY 192
L+Q D A +A L G +Y
Sbjct: 335 LVQMADATQAQLAINYLNGQRLY 357
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 84/196 (42%), Gaps = 22/196 (11%)
Query: 11 IFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGP 70
+FIL F +G VH++ K G ALVQ +D A A N L+G+ + ++ +
Sbjct: 311 LFIL--FGVYGDVHRVKIMFKKRGI-ALVQMADATQAQLAINYLNGQRLYGRVMHATLSK 367
Query: 71 C-TLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVL 129
T+++ D + ++DY+N L + + Q + P S L
Sbjct: 368 YQTIQLPREGQEDKGL------TKDYSNSPLHRFKNPCSKNFQ--------NIFPPSATL 413
Query: 130 LASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGH 189
+ N+ + T+D L +F++ G K F + ALIQ V+ AV A L H
Sbjct: 414 --HLSNIPSSATVDDLKNLFTSKGSTVKGFKFFQKDCKMALIQLGSVEEAVHALIELHNH 471
Query: 190 CIYDGGFCKLHISYSR 205
G L +S+S+
Sbjct: 472 DF--GENQHLRVSFSK 485
>gi|432103873|gb|ELK30706.1| Polypyrimidine tract-binding protein 2 [Myotis davidii]
Length = 538
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 125 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 184
+S VL I+NM Y VTLDVLH +F+ FG V KI F KN QAL+QY D A AK
Sbjct: 143 QSPVLRIIIDNMYYPVTLDVLHQIFTKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 202
Query: 185 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 203 ALDGQNIYNAC-CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 252
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 53/87 (60%), Gaps = 7/87 (8%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+F+ FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 165 QIFTKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 217
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLP 101
I +S +L+VK+ + +SRDYT P LP
Sbjct: 218 IDFSKLVNLNVKYNNDKSRDYTRPDLP 244
>gi|301781136|ref|XP_002925987.1| PREDICTED: regulator of differentiation 1-like [Ailuropoda
melanoleuca]
Length = 567
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/170 (43%), Positives = 93/170 (54%), Gaps = 16/170 (9%)
Query: 118 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 177
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 186 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGAVLKIITFTKNNQFQALLQYADPV 245
Query: 178 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILG 237
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 246 NAHYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL-- 302
Query: 238 QQPVPMV------GATANQYNGAQ-FAPPPPEQPMMHQPTAAGWGAVPPA 280
+P PM G ++ Y GA FAP HQ T AVP A
Sbjct: 303 -EP-PMAAAFGAPGIISSPYAGAAGFAP----AIGFHQATGLSVPAVPGA 346
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 53/89 (59%), Gaps = 7/89 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 215 QIFSKFGAVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYNAC-------CTLR 267
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVA 103
I +S T L+VK+ + +SRD+T LP
Sbjct: 268 IDFSKLTSLNVKYNNDKSRDFTRLDLPTG 296
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 81/198 (40%), Gaps = 22/198 (11%)
Query: 11 IFILQVFSAFGFVHKITT-FEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMG 69
+FIL F +G VH++ F K ALVQ +D A A N L G+ + +L
Sbjct: 390 LFIL--FGVYGDVHRVKIMFNKKE--NALVQMADASQAQLAMNHLSGQRLYGKVL----- 440
Query: 70 PCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVL 129
R T S H + + + + T + G + + + P S L
Sbjct: 441 ----RATLSKHQAVQLPREGQEDQGLTKDFSNSPLHRFKKPGSKNF----QNIFPPSATL 492
Query: 130 LASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGH 189
+ N+ +VT+D L +F+ G K F + ALIQ V+ A+ A L H
Sbjct: 493 --HLSNIPPSVTVDDLKNLFTEAGCSVKAFKFFQKDRKMALIQLGSVEEAIQALIELHNH 550
Query: 190 CIYDGGFCKLHISYSRHT 207
+ G L +S+S+ T
Sbjct: 551 DL--GENHHLRVSFSKST 566
>gi|170028938|ref|XP_001842351.1| polypyrimidine tract binding protein [Culex quinquefasciatus]
gi|167879401|gb|EDS42784.1| polypyrimidine tract binding protein [Culex quinquefasciatus]
Length = 535
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 89/162 (54%), Gaps = 8/162 (4%)
Query: 72 TLRITYSAHTDLSVKFQSHRSRDYT-NPYLPVAPSAIDASGQLSVGLDGKKLEPE----- 125
T+ + +S H +L Q+H + D T +P P A+D + S
Sbjct: 89 TVYVQFSNHRELKTD-QNHTATDLTQSPTGSPLPLALDHANTNSTTAGTGANVGGNAGGP 147
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VL +E++ Y V+LD+L+ +F FG V KI F KN QALIQYPD TA AK+
Sbjct: 148 NTVLRVIVESLLYPVSLDILYQIFQRFGKVLKIVTFTKNNSFQALIQYPDATTAQHAKQT 207
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
L+G IY+ G C L I S+ T L++K NND+SRDYT P+ P
Sbjct: 208 LDGQNIYN-GCCTLRIDNSKLTSLNVKYNNDKSRDYTNPTLP 248
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 60/109 (55%), Gaps = 11/109 (10%)
Query: 12 FILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPC 71
+ Q+F FG V KI TF K FQAL+Q+ D TA AK LDG++I G C
Sbjct: 166 ILYQIFQRFGKVLKIVTFTKNNSFQALIQYPDATTAQHAKQTLDGQNIYN-------GCC 218
Query: 72 TLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID----ASGQLSVG 116
TLRI S T L+VK+ + +SRDYTNP LP D A G +S G
Sbjct: 219 TLRIDNSKLTSLNVKYNNDKSRDYTNPTLPSGEPGSDVIASAGGLVSAG 267
>gi|441622594|ref|XP_003264050.2| PREDICTED: LOW QUALITY PROTEIN: polypyrimidine tract-binding
protein 3 isoform 1 [Nomascus leucogenys]
Length = 555
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 88/163 (53%), Gaps = 5/163 (3%)
Query: 75 ITYSAHTDLSVKF--QSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLAS 132
I YS H +L R++D V ++ SG S +G L +S VL
Sbjct: 131 IQYSNHRELKTDNLPNQARAQDALQAVSAVQSGSLALSGGRSN--EGTVLPGQSPVLXII 188
Query: 133 IENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 192
IEN+ Y TL+VLH +FS FG V KI F KN QAL+QY D A AK AL+G IY
Sbjct: 189 IENLFYRGTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIY 248
Query: 193 DGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 249 N-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 290
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 53/89 (59%), Gaps = 7/89 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 203 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYN-------ACCTLR 255
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVA 103
I +S T L+VK+ + +SRD+T LP
Sbjct: 256 IDFSKLTSLNVKYNNDKSRDFTRLDLPTG 284
>gi|413933764|gb|AFW68315.1| hypothetical protein ZEAMMB73_143783 [Zea mays]
gi|413945515|gb|AFW78164.1| hypothetical protein ZEAMMB73_011466 [Zea mays]
Length = 444
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/223 (34%), Positives = 109/223 (48%), Gaps = 51/223 (22%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKN-------ALDGRSIPRYLLP 65
+LQ+ FG V KI A Q L+Q D + SA ++ GR++
Sbjct: 22 LLQLLQPFGVVSKIVMLR--AKNQTLLQMEDIHASVSALQYYTSVQPSIRGRNV------ 73
Query: 66 ENMGPCTLRITYSAHTDLSVKFQSH-RSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEP 124
+ +S+H +L+ SH R+ D ++ EP
Sbjct: 74 --------YMQFSSHQELTTDQSSHGRNSD-------------------------QESEP 100
Query: 125 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 184
+ +LL +I +M Y +T++VLH VF A+G V+KI F K+ G QALIQ+ Q AV A
Sbjct: 101 -NRILLVTIHHMIYPITVEVLHQVFKAYGFVEKIVTFQKSAGFQALIQFHSRQEAVEAFG 159
Query: 185 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
+L G IYDG C+L I YS ++L + NNDRSRD+T PS P
Sbjct: 160 SLHGRNIYDGC-CQLDIQYSNLSELQVHYNNDRSRDFTNPSLP 201
>gi|170042024|ref|XP_001848742.1| polypyrimidine tract binding protein [Culex quinquefasciatus]
gi|167865565|gb|EDS28948.1| polypyrimidine tract binding protein [Culex quinquefasciatus]
Length = 572
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 89/162 (54%), Gaps = 8/162 (4%)
Query: 72 TLRITYSAHTDLSVKFQSHRSRDYT-NPYLPVAPSAIDASGQLSVGLDGKKLEPE----- 125
T+ + +S H +L Q+H + D T +P P A+D + S
Sbjct: 90 TVYVQFSNHRELKTD-QNHTATDLTQSPTGSPLPLALDHANTNSTTAGTGANVGGNAGGP 148
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VL +E++ Y V+LD+L+ +F FG V KI F KN QALIQYPD TA AK+
Sbjct: 149 NTVLRVIVESLLYPVSLDILYQIFQRFGKVLKIVTFTKNNSFQALIQYPDATTAQHAKQT 208
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
L+G IY+ G C L I S+ T L++K NND+SRDYT P+ P
Sbjct: 209 LDGQNIYN-GCCTLRIDNSKLTSLNVKYNNDKSRDYTNPTLP 249
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 60/109 (55%), Gaps = 11/109 (10%)
Query: 12 FILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPC 71
+ Q+F FG V KI TF K FQAL+Q+ D TA AK LDG++I G C
Sbjct: 167 ILYQIFQRFGKVLKIVTFTKNNSFQALIQYPDATTAQHAKQTLDGQNIYN-------GCC 219
Query: 72 TLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID----ASGQLSVG 116
TLRI S T L+VK+ + +SRDYTNP LP D A G +S G
Sbjct: 220 TLRIDNSKLTSLNVKYNNDKSRDYTNPTLPSGEPGSDVIASAGGLVSAG 268
>gi|340726548|ref|XP_003401618.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Bombus
terrestris]
Length = 578
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 84/146 (57%), Gaps = 4/146 (2%)
Query: 85 VKFQSHRS--RDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN-VLLASIENMQYAVT 141
V+F +HR D T+ + S + GQ V + + N VL +E M Y ++
Sbjct: 144 VQFSNHRELKTDQTHTNNANSNSQVTLPGQNQVAQTQAETQGGPNTVLRVIVEQMVYPIS 203
Query: 142 LDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHI 201
LDVL+ +F+ FG V KI F KN QALIQY D+ +A AK +LEG IY+ C L I
Sbjct: 204 LDVLYQIFTRFGKVLKIVTFTKNNTFQALIQYADMLSAQTAKLSLEGQNIYN-SCCTLRI 262
Query: 202 SYSRHTDLSIKVNNDRSRDYTLPSTP 227
YS+ +L++K NND+SRDYT PS P
Sbjct: 263 DYSKMQNLNVKYNNDKSRDYTNPSLP 288
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 69/110 (62%), Gaps = 10/110 (9%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCT 72
+ Q+F+ FG V KI TF K FQAL+Q++D +A +AK +L+G++I CT
Sbjct: 207 LYQIFTRFGKVLKIVTFTKNNTFQALIQYADMLSAQTAKLSLEGQNIYNSC-------CT 259
Query: 73 LRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKL 122
LRI YS +L+VK+ + +SRDYTNP LP + +DA+ S+ L G+ L
Sbjct: 260 LRIDYSKMQNLNVKYNNDKSRDYTNPSLPTGDANLDAA---SLALGGELL 306
>gi|413945516|gb|AFW78165.1| hypothetical protein ZEAMMB73_011466 [Zea mays]
Length = 444
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/223 (34%), Positives = 109/223 (48%), Gaps = 51/223 (22%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKN-------ALDGRSIPRYLLP 65
+LQ+ FG V KI A Q L+Q D + SA ++ GR++
Sbjct: 22 LLQLLQPFGVVSKIVMLR--AKNQTLLQMEDIHASVSALQYYTSVQPSIRGRNV------ 73
Query: 66 ENMGPCTLRITYSAHTDLSVKFQSH-RSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEP 124
+ +S+H +L+ SH R+ D ++ EP
Sbjct: 74 --------YMQFSSHQELTTDQSSHGRNSD-------------------------QESEP 100
Query: 125 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 184
+ +LL +I +M Y +T++VLH VF A+G V+KI F K+ G QALIQ+ Q AV A
Sbjct: 101 -NRILLVTIHHMIYPITVEVLHQVFKAYGFVEKIVTFQKSAGFQALIQFHSRQEAVEAFG 159
Query: 185 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
+L G IYDG C+L I YS ++L + NNDRSRD+T PS P
Sbjct: 160 SLHGRNIYDGC-CQLDIQYSNLSELQVHYNNDRSRDFTNPSLP 201
>gi|297270365|ref|XP_001099980.2| PREDICTED: regulator of differentiation 1-like [Macaca mulatta]
Length = 860
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 118 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 177
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 479 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 538
Query: 178 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 539 NAHYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 595
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 110/268 (41%), Gaps = 65/268 (24%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 508 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYNAC-------CTLR 560
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVA------------------------------- 103
I +S T L+VK+ + +SRD+T LP
Sbjct: 561 IDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSLEPPMAAAFGAPGIISSPYAGAAGFA 620
Query: 104 -------------PSAIDASGQLSV---------GLDGKKLEPESNVLLASIENMQYAVT 141
P+ A G L++ + G P ++VLL + N +T
Sbjct: 621 PAIGFPQATGLSVPAVPGALGPLTITSSAVTGRMAIPGASGIPGNSVLLVTNLNPDL-IT 679
Query: 142 LDVLHMVFSAFGPVQKIA-MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLH 200
L ++F +G V ++ MF+K AL+Q D A +A L G +Y G +
Sbjct: 680 PHGLFILFGVYGDVHRVKIMFNKKE--NALVQMADANQAQLAMNHLSGQRLY-GKVLRAT 736
Query: 201 ISYSRHTDLSIKVNNDRSRDYTLPSTPM 228
+S + L + D+ ++P+
Sbjct: 737 LSKHQAVQLPREGQEDQGLTKDFSNSPL 764
Score = 38.1 bits (87), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 79/198 (39%), Gaps = 22/198 (11%)
Query: 11 IFILQVFSAFGFVHKITT-FEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMG 69
+FIL F +G VH++ F K ALVQ +D A A N L G + +
Sbjct: 683 LFIL--FGVYGDVHRVKIMFNKKE--NALVQMADANQAQLAMNHLSG---------QRLY 729
Query: 70 PCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVL 129
LR T S H + + + + T + G + + + P S L
Sbjct: 730 GKVLRATLSKHQAVQLPREGQEDQGLTKDFSNSPLHRFKKPGSKNF----QNIFPPSATL 785
Query: 130 LASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGH 189
+ N+ +VT+D L +F G K F + ALIQ V+ A+ A L H
Sbjct: 786 --HLSNIPPSVTVDDLKNLFIEAGCSVKAFKFFQKDRKMALIQLGSVEEAIQALIELHNH 843
Query: 190 CIYDGGFCKLHISYSRHT 207
+ G L +S+S+ T
Sbjct: 844 DL--GENHHLRVSFSKST 859
>gi|410043023|ref|XP_003951547.1| PREDICTED: polypyrimidine tract-binding protein 3 [Pan troglodytes]
Length = 554
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 118 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 177
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 143 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 202
Query: 178 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 203 NAHYAKMALDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 259
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 53/87 (60%), Gaps = 7/87 (8%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 172 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYN-------ACCTLR 224
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLP 101
I +S T L+VK+ + +SRD+T LP
Sbjct: 225 IDFSKLTSLNVKYNNDKSRDFTRLDLP 251
>gi|209362272|gb|ACI43571.1| RBP50 [Cucurbita maxima]
Length = 445
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/215 (36%), Positives = 111/215 (51%), Gaps = 38/215 (17%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCT 72
+LQ+F FG + K+ A QAL+Q D SA NAL N+ P +
Sbjct: 22 LLQLFQPFGVITKLVMLR--AKNQALIQMQDV---PSAVNALQ--------FFANVQP-S 67
Query: 73 LRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLAS 132
+R ++ V+F SH+ + D + Q G+ EP + +LL +
Sbjct: 68 IR-----GRNVYVQFSSHQE-----------LTTADQNAQ------GRGDEP-NRILLVT 104
Query: 133 IENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 192
I +M Y +T++VLH VF G V+KI F K+ G QALIQY Q A+ A+ AL+G IY
Sbjct: 105 IHHMLYPITVEVLHQVFFPHGFVEKIVTFQKSAGFQALIQYQTRQCAISARTALQGRNIY 164
Query: 193 DGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
DG C+L I +S +L + NN+RSRD+T PS P
Sbjct: 165 DGC-CQLDIQFSNLDELQVNYNNERSRDFTNPSLP 198
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 110/231 (47%), Gaps = 48/231 (20%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
QVF GFV KI TF+K+AGFQAL+Q+ + A SA+ AL GR+I G C L
Sbjct: 119 QVFFPHGFVEKIVTFQKSAGFQALIQYQTRQCAISARTALQGRNIYD-------GCCQLD 171
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS----------------AIDASGQLSVGL- 117
I +S +L V + + RSRD+TNP LP P A+ ASG VG
Sbjct: 172 IQFSNLDELQVNYNNERSRDFTNPSLPSEPKGRPSQQPGYGDAGGMYALQASGAGPVGFP 231
Query: 118 -----------DGKKLEP-------ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA 159
G L P VL++++ + + D L +FS +G + +I
Sbjct: 232 QMANAAAVAAAFGGGLPPGVSGTNDRCTVLVSNLNPDR--IDEDKLFNLFSIYGNIARIK 289
Query: 160 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLS 210
+ +N AL+Q D A +A L+G ++ +L +++S+H +++
Sbjct: 290 LL-RNKPDHALVQMGDGFQAELAVHFLKGAMLFGK---RLEVNFSKHPNIT 336
>gi|25058871|gb|AAH39896.1| Similar to ROD1 regulator of differentiation 1 (S. pombe), partial
[Homo sapiens]
Length = 618
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 118 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 177
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 214 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 273
Query: 178 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 274 NAHYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 330
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 53/89 (59%), Gaps = 7/89 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 243 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYNAC-------CTLR 295
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVA 103
I +S T L+VK+ + +SRD+T LP
Sbjct: 296 IDFSKLTSLNVKYNNDKSRDFTRLDLPTG 324
>gi|426362704|ref|XP_004048495.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 1
[Gorilla gorilla gorilla]
Length = 591
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 118 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 177
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 180 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 239
Query: 178 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 240 NAHYAKMALDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 296
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 53/89 (59%), Gaps = 7/89 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 209 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYN-------ACCTLR 261
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVA 103
I +S T L+VK+ + +SRD+T LP
Sbjct: 262 IDFSKLTSLNVKYNNDKSRDFTRLDLPTG 290
>gi|324504709|gb|ADY42030.1| Regulator of differentiation 1 [Ascaris suum]
Length = 560
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/118 (44%), Positives = 75/118 (63%), Gaps = 2/118 (1%)
Query: 110 SGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQA 169
S L + + +P S VL IENM Y VTLDVLH +FS +G V +I F+KN QA
Sbjct: 138 SSALDISASCTQQQPNS-VLRVIIENMLYPVTLDVLHQIFSRYGKVLRIITFNKNNTFQA 196
Query: 170 LIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
L+Q + +A +A+++L+G +Y+G C L I YS+ L++K NND+SRDYT P+ P
Sbjct: 197 LVQLSEATSAQMARQSLDGQNVYNGCCC-LRIDYSKLATLNVKYNNDKSRDYTNPNLP 253
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 64/118 (54%), Gaps = 7/118 (5%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS +G V +I TF K FQALVQ S+ +A A+ +LDG+++ G C LR
Sbjct: 174 QIFSRYGKVLRIITFNKNNTFQALVQLSEATSAQMARQSLDGQNVYN-------GCCCLR 226
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLAS 132
I YS L+VK+ + +SRDYTNP LP ++ L G ++ P L+ S
Sbjct: 227 IDYSKLATLNVKYNNDKSRDYTNPNLPSGELTLEQQLSLVSAATGGQMGPAIASLVQS 284
>gi|349732190|ref|NP_001231826.1| polypyrimidine tract-binding protein 3 isoform 5 [Homo sapiens]
Length = 547
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 118 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 177
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 143 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 202
Query: 178 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 203 NAHYAKMALDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 259
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 53/89 (59%), Gaps = 7/89 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 172 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYN-------ACCTLR 224
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVA 103
I +S T L+VK+ + +SRD+T LP
Sbjct: 225 IDFSKLTSLNVKYNNDKSRDFTRLDLPTG 253
>gi|321470924|gb|EFX81898.1| hypothetical protein DAPPUDRAFT_302853 [Daphnia pulex]
Length = 540
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/100 (54%), Positives = 65/100 (65%), Gaps = 1/100 (1%)
Query: 128 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 187
VL +E+M Y VTLDVL +FS G V KI F KN QALIQYPDV TA AK L+
Sbjct: 167 VLRVIVEHMVYPVTLDVLFQIFSKVGRVLKIVTFTKNNTFQALIQYPDVVTAQAAKLTLD 226
Query: 188 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
G IY+ C L I YS+ + L++K NND+SRDYT P+ P
Sbjct: 227 GQNIYNSC-CTLRIEYSKLSSLNVKYNNDKSRDYTNPTLP 265
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 61/102 (59%), Gaps = 9/102 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
L V+F Q+FS G V KI TF K FQAL+Q+ D TA +AK LDG++I
Sbjct: 181 LDVLF--QIFSKVGRVLKIVTFTKNNTFQALIQYPDVVTAQAAKLTLDGQNIYN------ 232
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDA 109
CTLRI YS + L+VK+ + +SRDYTNP LP +DA
Sbjct: 233 -SCCTLRIEYSKLSSLNVKYNNDKSRDYTNPTLPTGDHNLDA 273
>gi|410928343|ref|XP_003977560.1| PREDICTED: polypyrimidine tract-binding protein 1-like [Takifugu
rubripes]
Length = 534
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/233 (34%), Positives = 116/233 (49%), Gaps = 24/233 (10%)
Query: 80 HTDLSVKFQSHRSRDYTN-PYLPVAPSAIDASGQLSVGLDGKKLEP----ESNVLLASIE 134
H + V+F +H+ N P A +A+ A G + P S+VL +E
Sbjct: 114 HQPVYVQFSNHKELKTDNSPNQERAQAALRAFG-------ASHMAPCAVASSSVLRVVVE 166
Query: 135 NMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDG 194
N+ Y V+LD L +FS FG V +I +F KN QAL+QYPD A AK +L+G IY+
Sbjct: 167 NLLYPVSLDALCQIFSKFGTVLRIIVFTKNSQFQALLQYPDAACAQAAKLSLDGQNIYNA 226
Query: 195 GFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGA----TANQ 250
C L IS+S+ T L++K NN++SRD+T P P + QP++ A +A
Sbjct: 227 C-CTLRISFSKLTSLNVKYNNEKSRDFTRPDLPPGDGQPTLEHPSMAAAFAAPGIISAAP 285
Query: 251 YNGA--QFAPPPPEQPMMHQPTA-AGWGAVPPASQSMPMMG----NHPYMPPG 296
Y GA F+P QP + P A A+P A S+ + G P +P G
Sbjct: 286 YAGAAQTFSPSYTIQPAVFLPPAGVTVPALPGALTSLSLAGAARMGFPSLPAG 338
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 56/89 (62%), Gaps = 7/89 (7%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCT 72
+ Q+FS FG V +I F K + FQAL+Q+ D A +AK +LDG++I CT
Sbjct: 177 LCQIFSKFGTVLRIIVFTKNSQFQALLQYPDAACAQAAKLSLDGQNIYN-------ACCT 229
Query: 73 LRITYSAHTDLSVKFQSHRSRDYTNPYLP 101
LRI++S T L+VK+ + +SRD+T P LP
Sbjct: 230 LRISFSKLTSLNVKYNNEKSRDFTRPDLP 258
>gi|90085391|dbj|BAE91436.1| unnamed protein product [Macaca fascicularis]
Length = 352
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 118 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 177
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 71 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 130
Query: 178 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 131 NAHYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 187
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 53/87 (60%), Gaps = 7/87 (8%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 100 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYN-------ACCTLR 152
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLP 101
I +S T L+VK+ + +SRD+T LP
Sbjct: 153 IDFSKLTSLNVKYNNDKSRDFTRLDLP 179
>gi|291382801|ref|XP_002708166.1| PREDICTED: ROD1 regulator of differentiation 1-like [Oryctolagus
cuniculus]
Length = 1000
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 118 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 177
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 619 EGTILPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 678
Query: 178 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 679 NAHYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 735
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 97/232 (41%), Gaps = 64/232 (27%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 648 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYNAC-------CTLR 700
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVA------------------------------- 103
I +S T L+VK+ + +SRD+T LP
Sbjct: 701 IDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSLEPPMAAAFGAPGIMSSPYAGAAGFA 760
Query: 104 -------------PSAIDASGQLSV---------GLDGKKLEPESNVLLASIENMQYAVT 141
P+ A G L++ + G P ++VLL + N +T
Sbjct: 761 PAIGFPQATGLSVPAVPGALGPLAITSSAVTGRMAIPGGSGVPGNSVLLVTNLNPDL-IT 819
Query: 142 LDVLHMVFSAFGPVQKIA-MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 192
L ++F +G V ++ MF+K AL+Q D A +A L G +Y
Sbjct: 820 PHGLFILFGVYGDVHRVKIMFNKK--ENALVQMADANQAQLAMNHLSGQRLY 869
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 79/198 (39%), Gaps = 22/198 (11%)
Query: 11 IFILQVFSAFGFVHKITT-FEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMG 69
+FIL F +G VH++ F K ALVQ +D A A N L G + +
Sbjct: 823 LFIL--FGVYGDVHRVKIMFNKKE--NALVQMADANQAQLAMNHLSG---------QRLY 869
Query: 70 PCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVL 129
LR T S H + + + + T + G + + + P S L
Sbjct: 870 GKVLRATLSKHQAVQLPREGQEDQGLTKDFSNSPLHRFKKPGSKNF----QNIFPPSATL 925
Query: 130 LASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGH 189
+ N+ +VT+D L +F G K F + ALIQ V+ A+ A L H
Sbjct: 926 --HLSNIPPSVTVDDLKNLFIEAGCSVKAFKFFQKDRKMALIQLGSVEEAIQALIELHNH 983
Query: 190 CIYDGGFCKLHISYSRHT 207
+ G L +S+S+ T
Sbjct: 984 DL--GENHHLRVSFSKST 999
>gi|349732186|ref|NP_001231825.1| polypyrimidine tract-binding protein 3 isoform 4 [Homo sapiens]
gi|332832555|ref|XP_001149256.2| PREDICTED: polypyrimidine tract-binding protein 3 isoform 1 [Pan
troglodytes]
Length = 457
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 118 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 177
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 76 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 135
Query: 178 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 136 NAHYAKMALDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 192
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 53/87 (60%), Gaps = 7/87 (8%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 105 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYN-------ACCTLR 157
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLP 101
I +S T L+VK+ + +SRD+T LP
Sbjct: 158 IDFSKLTSLNVKYNNDKSRDFTRLDLP 184
>gi|119579506|gb|EAW59102.1| ROD1 regulator of differentiation 1 (S. pombe), isoform CRA_c [Homo
sapiens]
Length = 482
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 118 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 177
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 101 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 160
Query: 178 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 161 NAHYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 217
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 53/87 (60%), Gaps = 7/87 (8%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 130 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYNAC-------CTLR 182
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLP 101
I +S T L+VK+ + +SRD+T LP
Sbjct: 183 IDFSKLTSLNVKYNNDKSRDFTRLDLP 209
>gi|355567525|gb|EHH23866.1| hypothetical protein EGK_07422, partial [Macaca mulatta]
Length = 558
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 118 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 177
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 177 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 236
Query: 178 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 237 NAHYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 293
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 53/89 (59%), Gaps = 7/89 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 206 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYNAC-------CTLR 258
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVA 103
I +S T L+VK+ + +SRD+T LP
Sbjct: 259 IDFSKLTSLNVKYNNDKSRDFTRLDLPTG 287
>gi|296190586|ref|XP_002743247.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 1
[Callithrix jacchus]
Length = 558
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 118 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 177
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 177 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 236
Query: 178 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 237 NAHYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 293
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 53/89 (59%), Gaps = 7/89 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 206 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYN-------ACCTLR 258
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVA 103
I +S T L+VK+ + +SRD+T LP
Sbjct: 259 IDFSKLTSLNVKYNNDKSRDFTRLDLPTG 287
>gi|390458239|ref|XP_003732081.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 2
[Callithrix jacchus]
Length = 524
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 118 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 177
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 143 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 202
Query: 178 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 203 NAHYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 259
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 53/89 (59%), Gaps = 7/89 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 172 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYN-------ACCTLR 224
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVA 103
I +S T L+VK+ + +SRD+T LP
Sbjct: 225 IDFSKLTSLNVKYNNDKSRDFTRLDLPTG 253
>gi|25146811|ref|NP_741041.1| Protein PTB-1, isoform a [Caenorhabditis elegans]
gi|20338920|emb|CAA85411.3| Protein PTB-1, isoform a [Caenorhabditis elegans]
Length = 615
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 92/156 (58%), Gaps = 13/156 (8%)
Query: 72 TLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLA 131
TL YS H +L KF +++ ++ + A+G +S G + +P S VL
Sbjct: 187 TLFAQYSTHREL--KFDKNKA---------ISDTESVANGSVSNFEVGTQQQPNS-VLRT 234
Query: 132 SIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCI 191
IENM + V+LDVL+ +F+ +G V +I F+KN QAL+Q + +A +AK+ LE +
Sbjct: 235 IIENMMFPVSLDVLYQLFTRYGKVLRIITFNKNNTFQALVQMSEANSAQLAKQGLENQNV 294
Query: 192 YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
Y+G C L I YS+ + L++K NND+SRDYT P+ P
Sbjct: 295 YNGC-CTLRIDYSKLSTLNVKYNNDKSRDYTNPNLP 329
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 61/103 (59%), Gaps = 7/103 (6%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCT 72
+ Q+F+ +G V +I TF K FQALVQ S+ +A AK L+ +++ G CT
Sbjct: 248 LYQLFTRYGKVLRIITFNKNNTFQALVQMSEANSAQLAKQGLENQNVYN-------GCCT 300
Query: 73 LRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSV 115
LRI YS + L+VK+ + +SRDYTNP LP ++ + +S+
Sbjct: 301 LRIDYSKLSTLNVKYNNDKSRDYTNPNLPAGEMTLEQTIAMSI 343
>gi|354486792|ref|XP_003505562.1| PREDICTED: regulator of differentiation 1-like [Cricetulus griseus]
Length = 643
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/130 (46%), Positives = 78/130 (60%), Gaps = 5/130 (3%)
Query: 110 SGQLSV----GLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNG 165
SG LS+ +G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN
Sbjct: 250 SGNLSLPGAPSNEGAVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNN 309
Query: 166 GLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 225
QAL+QY D A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T
Sbjct: 310 QFQALLQYADPLNAHYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLD 368
Query: 226 TPMVNSQPSI 235
P + QPS+
Sbjct: 369 LPTGDGQPSL 378
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 98/232 (42%), Gaps = 64/232 (27%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 291 QIFSKFGTVLKIITFTKNNQFQALLQYADPLNAHYAKMALDGQNIYNAC-------CTLR 343
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVA----------PSAIDASGQLS---------- 114
I +S T L+VK+ + +SRD+T LP +A A G +S
Sbjct: 344 IDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSLEPPMAAAFGAPGIISSPYAGAAGFA 403
Query: 115 ---------------------------------VGLDGKKLEPESNVLLASIENMQYAVT 141
+ + G P ++VLL + N + +T
Sbjct: 404 PAIGFPQATGLSVPAVPGALGPLTLTSSAVTGRMAIPGASGIPGNSVLLVTNLNPDF-IT 462
Query: 142 LDVLHMVFSAFGPVQKIA-MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 192
L ++F +G V ++ MF+K AL+Q D A +A L G +Y
Sbjct: 463 PHGLFILFGVYGDVHRVKIMFNKKE--NALVQMADASQAQLAMNHLSGQRLY 512
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 80/198 (40%), Gaps = 22/198 (11%)
Query: 11 IFILQVFSAFGFVHKITT-FEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMG 69
+FIL F +G VH++ F K ALVQ +D A A N L G + +
Sbjct: 466 LFIL--FGVYGDVHRVKIMFNKKE--NALVQMADASQAQLAMNHLSG---------QRLY 512
Query: 70 PCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVL 129
LR T S H + + + + T + G + + + P S L
Sbjct: 513 GKVLRATLSKHQAVQLPREGQEDQGLTKDFSNSPLHRFKKPGSKNF----QNIFPPSATL 568
Query: 130 LASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGH 189
+ N+ +VT+D L +F+ G K F + ALIQ V+ A+ A L H
Sbjct: 569 --HLSNIPPSVTMDDLKNLFTEAGCSVKAFKFFQKDRKMALIQLGSVEEAIQALIELHNH 626
Query: 190 CIYDGGFCKLHISYSRHT 207
+ G L +S+S+ T
Sbjct: 627 DL--GENHHLRVSFSKST 642
>gi|380801045|gb|AFE72398.1| regulator of differentiation 1 isoform 1, partial [Macaca mulatta]
Length = 456
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 118 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 177
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 75 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 134
Query: 178 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 135 NAHYAKMALDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 191
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 53/87 (60%), Gaps = 7/87 (8%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 104 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYN-------ACCTLR 156
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLP 101
I +S T L+VK+ + +SRD+T LP
Sbjct: 157 IDFSKLTSLNVKYNNDKSRDFTRLDLP 183
>gi|297685129|ref|XP_002820148.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 1 [Pongo
abelii]
Length = 558
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 118 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 177
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 177 EGAVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 236
Query: 178 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 237 NAHYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 293
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 53/89 (59%), Gaps = 7/89 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 206 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYNAC-------CTLR 258
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVA 103
I +S T L+VK+ + +SRD+T LP
Sbjct: 259 IDFSKLTSLNVKYNNDKSRDFTRLDLPTG 287
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 81/198 (40%), Gaps = 22/198 (11%)
Query: 11 IFILQVFSAFGFVHKITT-FEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMG 69
+FIL F +G VH++ F K ALVQ +D A A N L G+ + +L
Sbjct: 381 LFIL--FGVYGDVHRVKIMFNKKE--NALVQMADANQAQLAMNHLSGQRLYGKVL----- 431
Query: 70 PCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVL 129
R T S H + + + + T + G + + + P S L
Sbjct: 432 ----RATLSKHQAVQLPREGQEDQGLTKDFSNSPLHRFKKPGSKNF----QNIFPPSATL 483
Query: 130 LASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGH 189
+ N+ +VT+D L +F+ G K F + ALIQ V+ A+ A L H
Sbjct: 484 --HLSNIPPSVTVDDLKNLFTEAGCSVKAFKFFQKDRKMALIQLGSVEEAIQALIELHNH 541
Query: 190 CIYDGGFCKLHISYSRHT 207
+ G L +S+S+ T
Sbjct: 542 DL--GENHHLRVSFSKST 557
>gi|426362706|ref|XP_004048496.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 2
[Gorilla gorilla gorilla]
gi|4514554|dbj|BAA75466.1| Rod1 [Homo sapiens]
Length = 521
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 118 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 177
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 140 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 199
Query: 178 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 200 NAHYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 256
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 53/89 (59%), Gaps = 7/89 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 169 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYN-------ACCTLR 221
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVA 103
I +S T L+VK+ + +SRD+T LP
Sbjct: 222 IDFSKLTSLNVKYNNDKSRDFTRLDLPTG 250
>gi|403266191|ref|XP_003925277.1| PREDICTED: polypyrimidine tract-binding protein 3 [Saimiri
boliviensis boliviensis]
Length = 558
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 118 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 177
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 177 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 236
Query: 178 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 237 NAHYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 293
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 53/89 (59%), Gaps = 7/89 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 206 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYN-------ACCTLR 258
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVA 103
I +S T L+VK+ + +SRD+T LP
Sbjct: 259 IDFSKLTSLNVKYNNDKSRDFTRLDLPTG 287
>gi|344244560|gb|EGW00664.1| Regulator of differentiation 1 [Cricetulus griseus]
Length = 523
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/130 (46%), Positives = 78/130 (60%), Gaps = 5/130 (3%)
Query: 110 SGQLSV----GLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNG 165
SG LS+ +G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN
Sbjct: 130 SGNLSLPGAPSNEGAVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNN 189
Query: 166 GLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 225
QAL+QY D A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T
Sbjct: 190 QFQALLQYADPLNAHYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLD 248
Query: 226 TPMVNSQPSI 235
P + QPS+
Sbjct: 249 LPTGDGQPSL 258
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 53/89 (59%), Gaps = 7/89 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 171 QIFSKFGTVLKIITFTKNNQFQALLQYADPLNAHYAKMALDGQNIYN-------ACCTLR 223
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVA 103
I +S T L+VK+ + +SRD+T LP
Sbjct: 224 IDFSKLTSLNVKYNNDKSRDFTRLDLPTG 252
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 81/198 (40%), Gaps = 22/198 (11%)
Query: 11 IFILQVFSAFGFVHKITT-FEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMG 69
+FIL F +G VH++ F K ALVQ +D A A N L G+ + +L
Sbjct: 346 LFIL--FGVYGDVHRVKIMFNKKE--NALVQMADASQAQLAMNHLSGQRLYGKVL----- 396
Query: 70 PCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVL 129
R T S H + + + + T + G + + + P S L
Sbjct: 397 ----RATLSKHQAVQLPREGQEDQGLTKDFSNSPLHRFKKPGSKNF----QNIFPPSATL 448
Query: 130 LASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGH 189
+ N+ +VT+D L +F+ G K F + ALIQ V+ A+ A L H
Sbjct: 449 --HLSNIPPSVTMDDLKNLFTEAGCSVKAFKFFQKDRKMALIQLGSVEEAIQALIELHNH 506
Query: 190 CIYDGGFCKLHISYSRHT 207
+ G L +S+S+ T
Sbjct: 507 DL--GENHHLRVSFSKST 522
>gi|402896665|ref|XP_003911411.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 3 [Papio
anubis]
Length = 521
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 118 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 177
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 140 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 199
Query: 178 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 200 NAHYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 256
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 53/89 (59%), Gaps = 7/89 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 169 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYN-------ACCTLR 221
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVA 103
I +S T L+VK+ + +SRD+T LP
Sbjct: 222 IDFSKLTSLNVKYNNDKSRDFTRLDLPTG 250
>gi|312097472|ref|XP_003148986.1| hypothetical protein LOAG_13430 [Loa loa]
Length = 255
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 97/178 (54%), Gaps = 19/178 (10%)
Query: 102 VAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMF 161
++ SA+D S + +P S VL IENM Y VTLDVL+ +FS +G V +I F
Sbjct: 19 ISASALDISA-------CTQQQPNS-VLRVIIENMLYPVTLDVLYQIFSRYGKVLRIITF 70
Query: 162 DKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDY 221
+KN QAL+Q + +A +A+++L+G +Y+G C L I YS+ L++K NND+SRDY
Sbjct: 71 NKNNTFQALVQLSEANSAQLARQSLDGQNVYNGCCC-LRIDYSKLATLNVKYNNDKSRDY 129
Query: 222 TLPSTPMVNSQPSILGQQPVPMVGATANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPP 279
T P+ P S L QQ + AT G Q P ++ P A +GA P
Sbjct: 130 TNPNLP---SGELTLEQQLSLVSAAT-----GGQMGPAIAS--LVQSPFAFPFGAANP 177
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 65/117 (55%), Gaps = 9/117 (7%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
L V++ Q+FS +G V +I TF K FQALVQ S+ +A A+ +LDG+++
Sbjct: 51 LDVLY--QIFSRYGKVLRIITFNKNNTFQALVQLSEANSAQLARQSLDGQNVYN------ 102
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEP 124
G C LRI YS L+VK+ + +SRDYTNP LP ++ L G ++ P
Sbjct: 103 -GCCCLRIDYSKLATLNVKYNNDKSRDYTNPNLPSGELTLEQQLSLVSAATGGQMGP 158
>gi|349732192|ref|NP_001231827.1| polypyrimidine tract-binding protein 3 isoform 6 [Homo sapiens]
gi|114626184|ref|XP_001149612.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 5 [Pan
troglodytes]
gi|397479183|ref|XP_003810907.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 2 [Pan
paniscus]
gi|27882560|gb|AAH44585.1| ROD1 protein [Homo sapiens]
gi|119579503|gb|EAW59099.1| ROD1 regulator of differentiation 1 (S. pombe), isoform CRA_a [Homo
sapiens]
Length = 558
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 118 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 177
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 177 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 236
Query: 178 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 237 NAHYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 293
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 53/89 (59%), Gaps = 7/89 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 206 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYNAC-------CTLR 258
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVA 103
I +S T L+VK+ + +SRD+T LP
Sbjct: 259 IDFSKLTSLNVKYNNDKSRDFTRLDLPTG 287
>gi|255003738|ref|NP_001157260.1| polypyrimidine tract-binding protein 3 isoform 2 [Homo sapiens]
gi|397479181|ref|XP_003810906.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 1 [Pan
paniscus]
gi|410043017|ref|XP_003951545.1| PREDICTED: polypyrimidine tract-binding protein 3 [Pan troglodytes]
gi|194380114|dbj|BAG63824.1| unnamed protein product [Homo sapiens]
Length = 524
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 118 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 177
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 143 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 202
Query: 178 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 203 NAHYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 259
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 53/89 (59%), Gaps = 7/89 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 172 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYN-------ACCTLR 224
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVA 103
I +S T L+VK+ + +SRD+T LP
Sbjct: 225 IDFSKLTSLNVKYNNDKSRDFTRLDLPTG 253
>gi|355753108|gb|EHH57154.1| hypothetical protein EGM_06734, partial [Macaca fascicularis]
Length = 539
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 118 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 177
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 158 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 217
Query: 178 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 218 NAHYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 274
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 53/89 (59%), Gaps = 7/89 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 187 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYNAC-------CTLR 239
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVA 103
I +S T L+VK+ + +SRD+T LP
Sbjct: 240 IDFSKLTSLNVKYNNDKSRDFTRLDLPTG 268
>gi|395740821|ref|XP_002820150.2| PREDICTED: polypyrimidine tract-binding protein 3 isoform 3 [Pongo
abelii]
Length = 524
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 118 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 177
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 143 EGAVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 202
Query: 178 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 203 NAHYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 259
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 53/89 (59%), Gaps = 7/89 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 172 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYN-------ACCTLR 224
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVA 103
I +S T L+VK+ + +SRD+T LP
Sbjct: 225 IDFSKLTSLNVKYNNDKSRDFTRLDLPTG 253
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 81/198 (40%), Gaps = 22/198 (11%)
Query: 11 IFILQVFSAFGFVHKITT-FEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMG 69
+FIL F +G VH++ F K ALVQ +D A A N L G+ + +L
Sbjct: 347 LFIL--FGVYGDVHRVKIMFNKKE--NALVQMADANQAQLAMNHLSGQRLYGKVL----- 397
Query: 70 PCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVL 129
R T S H + + + + T + G + + + P S L
Sbjct: 398 ----RATLSKHQAVQLPREGQEDQGLTKDFSNSPLHRFKKPGSKNF----QNIFPPSATL 449
Query: 130 LASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGH 189
+ N+ +VT+D L +F+ G K F + ALIQ V+ A+ A L H
Sbjct: 450 --HLSNIPPSVTVDDLKNLFTEAGCSVKAFKFFQKDRKMALIQLGSVEEAIQALIELHNH 507
Query: 190 CIYDGGFCKLHISYSRHT 207
+ G L +S+S+ T
Sbjct: 508 DL--GENHHLRVSFSKST 523
>gi|395824362|ref|XP_003785435.1| PREDICTED: polypyrimidine tract-binding protein 3 [Otolemur
garnettii]
Length = 534
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 118 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 177
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 153 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 212
Query: 178 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 213 NAHYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 269
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 53/89 (59%), Gaps = 7/89 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 182 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYNAC-------CTLR 234
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVA 103
I +S T L+VK+ + +SRD+T LP
Sbjct: 235 IDFSKLTSLNVKYNNDKSRDFTRLDLPTG 263
Score = 37.4 bits (85), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 80/198 (40%), Gaps = 22/198 (11%)
Query: 11 IFILQVFSAFGFVHKITT-FEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMG 69
+FIL F +G VH++ F K ALVQ +D A A N L G+ + +L
Sbjct: 357 LFIL--FGVYGDVHRVKIMFNKKE--NALVQMADANQAQLAMNHLSGQRLYGKVL----- 407
Query: 70 PCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVL 129
R T S H + + + + T + G + + + P S L
Sbjct: 408 ----RATLSKHQAVQLPREGQEDQGLTKDFSNSPLHRFKKPGSKNF----QNIFPPSATL 459
Query: 130 LASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGH 189
+ N+ +VT+D L +F G K F + ALIQ V+ A+ A L H
Sbjct: 460 --HLSNIPPSVTVDDLKSLFIDAGCSVKAFKFFQKDRKMALIQLGSVEEAIQALIELHNH 517
Query: 190 CIYDGGFCKLHISYSRHT 207
+ G L +S+S+ T
Sbjct: 518 DL--GENHHLRVSFSKST 533
>gi|402896661|ref|XP_003911409.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 1 [Papio
anubis]
Length = 524
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 118 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 177
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 143 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 202
Query: 178 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 203 NAHYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 259
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 53/87 (60%), Gaps = 7/87 (8%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 172 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYN-------ACCTLR 224
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLP 101
I +S T L+VK+ + +SRD+T LP
Sbjct: 225 IDFSKLTSLNVKYNNDKSRDFTRLDLP 251
>gi|410043020|ref|XP_003951546.1| PREDICTED: polypyrimidine tract-binding protein 3 [Pan troglodytes]
Length = 558
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 118 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 177
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 177 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 236
Query: 178 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 237 NAHYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 293
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 53/89 (59%), Gaps = 7/89 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 206 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYN-------ACCTLR 258
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVA 103
I +S T L+VK+ + +SRD+T LP
Sbjct: 259 IDFSKLTSLNVKYNNDKSRDFTRLDLPTG 287
>gi|393904664|gb|EJD73763.1| polypyrimidine tract-binding protein 1 [Loa loa]
Length = 546
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 97/178 (54%), Gaps = 19/178 (10%)
Query: 102 VAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMF 161
++ SA+D S + +P S VL IENM Y VTLDVL+ +FS +G V +I F
Sbjct: 126 ISASALDISA-------CTQQQPNS-VLRVIIENMLYPVTLDVLYQIFSRYGKVLRIITF 177
Query: 162 DKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDY 221
+KN QAL+Q + +A +A+++L+G +Y+G C L I YS+ L++K NND+SRDY
Sbjct: 178 NKNNTFQALVQLSEANSAQLARQSLDGQNVYNGCCC-LRIDYSKLATLNVKYNNDKSRDY 236
Query: 222 TLPSTPMVNSQPSILGQQPVPMVGATANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPP 279
T P+ P S L QQ + AT G Q P ++ P A +GA P
Sbjct: 237 TNPNLP---SGELTLEQQLSLVSAAT-----GGQMGPAIAS--LVQSPFAFPFGAANP 284
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 62/112 (55%), Gaps = 7/112 (6%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCT 72
+ Q+FS +G V +I TF K FQALVQ S+ +A A+ +LDG+++ G C
Sbjct: 161 LYQIFSRYGKVLRIITFNKNNTFQALVQLSEANSAQLARQSLDGQNVYN-------GCCC 213
Query: 73 LRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEP 124
LRI YS L+VK+ + +SRDYTNP LP ++ L G ++ P
Sbjct: 214 LRIDYSKLATLNVKYNNDKSRDYTNPNLPSGELTLEQQLSLVSAATGGQMGP 265
>gi|343959136|dbj|BAK63423.1| regulator of differentiation 1 [Pan troglodytes]
Length = 524
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 118 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 177
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 143 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 202
Query: 178 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 203 NAHYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 259
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 53/89 (59%), Gaps = 7/89 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 172 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYN-------ACCTLR 224
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVA 103
I +S T L+VK+ + +SRD+T LP
Sbjct: 225 IDFSKLTSLNVKYNNDKSRDFTRLDLPTG 253
>gi|255003744|ref|NP_001157262.1| polypyrimidine tract-binding protein 3 isoform 3 [Homo sapiens]
gi|114626182|ref|XP_528390.2| PREDICTED: polypyrimidine tract-binding protein 3 isoform 6 [Pan
troglodytes]
gi|397479185|ref|XP_003810908.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 3 [Pan
paniscus]
gi|51476645|emb|CAH18301.1| hypothetical protein [Homo sapiens]
Length = 555
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 118 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 177
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 174 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 233
Query: 178 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 234 NAHYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 290
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 53/89 (59%), Gaps = 7/89 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 203 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYN-------ACCTLR 255
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVA 103
I +S T L+VK+ + +SRD+T LP
Sbjct: 256 IDFSKLTSLNVKYNNDKSRDFTRLDLPTG 284
>gi|402896663|ref|XP_003911410.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 2 [Papio
anubis]
Length = 555
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 118 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 177
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 174 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 233
Query: 178 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 234 NAHYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 290
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 53/89 (59%), Gaps = 7/89 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 203 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYN-------ACCTLR 255
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVA 103
I +S T L+VK+ + +SRD+T LP
Sbjct: 256 IDFSKLTSLNVKYNNDKSRDFTRLDLPTG 284
>gi|38569466|ref|NP_005147.3| polypyrimidine tract-binding protein 3 isoform 1 [Homo sapiens]
gi|218511814|sp|O95758.2|PTBP3_HUMAN RecName: Full=Polypyrimidine tract-binding protein 3; AltName:
Full=Regulator of differentiation 1; Short=Rod1
gi|119579504|gb|EAW59100.1| ROD1 regulator of differentiation 1 (S. pombe), isoform CRA_b [Homo
sapiens]
gi|119579505|gb|EAW59101.1| ROD1 regulator of differentiation 1 (S. pombe), isoform CRA_b [Homo
sapiens]
Length = 552
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 118 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 177
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 171 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 230
Query: 178 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 231 NAHYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 287
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 53/89 (59%), Gaps = 7/89 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 200 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYN-------ACCTLR 252
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVA 103
I +S T L+VK+ + +SRD+T LP
Sbjct: 253 IDFSKLTSLNVKYNNDKSRDFTRLDLPTG 281
>gi|395740824|ref|XP_002820149.2| PREDICTED: polypyrimidine tract-binding protein 3 isoform 2 [Pongo
abelii]
Length = 555
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 118 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 177
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 174 EGAVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 233
Query: 178 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 234 NAHYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 290
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 53/89 (59%), Gaps = 7/89 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 203 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYN-------ACCTLR 255
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVA 103
I +S T L+VK+ + +SRD+T LP
Sbjct: 256 IDFSKLTSLNVKYNNDKSRDFTRLDLPTG 284
Score = 38.5 bits (88), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 81/198 (40%), Gaps = 22/198 (11%)
Query: 11 IFILQVFSAFGFVHKITT-FEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMG 69
+FIL F +G VH++ F K ALVQ +D A A N L G+ + +L
Sbjct: 378 LFIL--FGVYGDVHRVKIMFNKKE--NALVQMADANQAQLAMNHLSGQRLYGKVL----- 428
Query: 70 PCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVL 129
R T S H + + + + T + G + + + P S L
Sbjct: 429 ----RATLSKHQAVQLPREGQEDQGLTKDFSNSPLHRFKKPGSKNF----QNIFPPSATL 480
Query: 130 LASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGH 189
+ N+ +VT+D L +F+ G K F + ALIQ V+ A+ A L H
Sbjct: 481 --HLSNIPPSVTVDDLKNLFTEAGCSVKAFKFFQKDRKMALIQLGSVEEAIQALIELHNH 538
Query: 190 CIYDGGFCKLHISYSRHT 207
+ G L +S+S+ T
Sbjct: 539 DL--GENHHLRVSFSKST 554
>gi|187608032|ref|NP_001120518.1| polypyrimidine tract binding protein 3 [Xenopus (Silurana)
tropicalis]
gi|170287806|gb|AAI61422.1| LOC100145652 protein [Xenopus (Silurana) tropicalis]
Length = 519
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/120 (47%), Positives = 74/120 (61%), Gaps = 1/120 (0%)
Query: 116 GLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPD 175
G +G L +S VL +EN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 138 GGEGLVLSGQSPVLRIIVENLFYPVTLEVLHQIFSKFGTVIKIITFTKNNQFQALLQYAD 197
Query: 176 VQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 198 PMNAHHAKVALDGQNIYN-ACCTLRIEFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 256
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 53/89 (59%), Gaps = 7/89 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 169 QIFSKFGTVIKIITFTKNNQFQALLQYADPMNAHHAKVALDGQNIYN-------ACCTLR 221
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVA 103
I +S T L+VK+ + +SRD+T LP
Sbjct: 222 IEFSKLTSLNVKYNNDKSRDFTRLDLPTG 250
Score = 38.1 bits (87), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 85/197 (43%), Gaps = 24/197 (12%)
Query: 11 IFILQVFSAFGFVHKITT-FEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMG 69
+FIL F +G V ++ F K ALVQ +D A A + L+G+ + +L
Sbjct: 342 LFIL--FGVYGDVQRVKILFNKKE--NALVQMTDATQAQFAMSHLNGQRLHGRVL----- 392
Query: 70 PCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVL 129
RIT S H + + + H + T Y G + + + P S L
Sbjct: 393 ----RITLSKHQSVQLPREGHEDQGLTKDYTNSPLHRFKKPGSKNF----QNIFPPSATL 444
Query: 130 LASIENMQYAVTLDVLHMVFSAFG-PVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEG 188
+ N+ VT + L +F++ G V+ F K+ + ALIQ V+ A++A L
Sbjct: 445 --HLSNIPPLVTDEDLKRLFASTGCSVKGFKFFQKDRKM-ALIQLGSVEEAILALIELHN 501
Query: 189 HCIYDGGFCKLHISYSR 205
H + G L +S+S+
Sbjct: 502 HDL--GENHHLRVSFSK 516
>gi|198435860|ref|XP_002127727.1| PREDICTED: similar to polypyrimidine tract binding protein 1 [Ciona
intestinalis]
Length = 516
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 91/173 (52%), Gaps = 16/173 (9%)
Query: 128 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 187
VL A IENM Y +TLDVLH +FS FG + KI F K+ QALIQ D + AK +L+
Sbjct: 147 VLRAVIENMLYPITLDVLHTIFSKFGVILKIITFTKSSQFQALIQMADALQSQTAKLSLD 206
Query: 188 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGAT 247
G IY+ G C L I YS+ + L++K NND+SRDYT P + + SILG G+T
Sbjct: 207 GQNIYN-GCCTLRIEYSKLSSLNVKFNNDKSRDYTRNDLP--SGEASILG------TGST 257
Query: 248 -ANQYNGAQFAPPPPEQPM---MHQPTAAGWGAVPPASQSMP---MMGNHPYM 293
+ GA P P + + + Q A A Q + M GN +M
Sbjct: 258 LQSMLGGAGLMPSPYQNNIAAAIQQSQLASLANASGALQHLTGTNMAGNSNHM 310
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 107/247 (43%), Gaps = 63/247 (25%)
Query: 16 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 75
+FS FG + KI TF K++ FQAL+Q +D + +AK +LDG++I G CTLRI
Sbjct: 167 IFSKFGVILKIITFTKSSQFQALIQMADALQSQTAKLSLDGQNIYN-------GCCTLRI 219
Query: 76 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQ-LSVGLDGKKL--EPESNVLLAS 132
YS + L+VKF + +SRDYT LP ++I +G L L G L P N + A+
Sbjct: 220 EYSKLSSLNVKFNNDKSRDYTRNDLPSGEASILGTGSTLQSMLGGAGLMPSPYQNNIAAA 279
Query: 133 IENMQYA-----------------------------------------------VTLDVL 145
I+ Q A VT L
Sbjct: 280 IQQSQLASLANASGALQHLTGTNMAGNSNHMVTQLAAMVGQTSVLHVSNLNEEMVTPQSL 339
Query: 146 HMVFSAFGPVQKIA-MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYS 204
++F +G V ++ M+ K AL+Q D Q A + L G +YD L I S
Sbjct: 340 FILFGVYGDVNRVKIMYQKKSN--ALVQMNDHQQAQTVIKYLHGVKLYDR---PLQIMMS 394
Query: 205 RHTDLSI 211
RH + +
Sbjct: 395 RHNQVQM 401
>gi|383854460|ref|XP_003702739.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Megachile
rotundata]
Length = 552
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 51/102 (50%), Positives = 67/102 (65%), Gaps = 1/102 (0%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VL +E M Y ++LDVL+ +F+ FG V KI F KN QALIQY D+ +A AK +
Sbjct: 87 NTVLRVIVEQMVYPISLDVLYQIFTRFGKVLKIVTFTKNSTFQALIQYADMLSAQTAKLS 146
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
LEG IY+ C L I YS+ +L++K NND+SRDYT PS P
Sbjct: 147 LEGQNIYN-SCCTLRIDYSKMQNLNVKYNNDKSRDYTNPSLP 187
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 70/110 (63%), Gaps = 10/110 (9%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCT 72
+ Q+F+ FG V KI TF K + FQAL+Q++D +A +AK +L+G++I CT
Sbjct: 106 LYQIFTRFGKVLKIVTFTKNSTFQALIQYADMLSAQTAKLSLEGQNIYN-------SCCT 158
Query: 73 LRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKL 122
LRI YS +L+VK+ + +SRDYTNP LP + +DA+ S+ L G+ L
Sbjct: 159 LRIDYSKMQNLNVKYNNDKSRDYTNPSLPTGDANLDAA---SLALGGELL 205
>gi|328712478|ref|XP_001947870.2| PREDICTED: polypyrimidine tract-binding protein 1-like isoform 1
[Acyrthosiphon pisum]
Length = 613
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 51/102 (50%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VL +E+M + ++LDVL+ +FS +G V KI F KN Q LIQYPDV TA AK +
Sbjct: 193 NTVLRVIVEHMVFPISLDVLYEIFSRYGKVLKIVTFTKNNSFQVLIQYPDVVTAQSAKLS 252
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
L+G IY CKL I YS+ + L++K NND+SRDYT P+ P
Sbjct: 253 LDGQNIYT-SCCKLRIEYSKLSSLNVKYNNDKSRDYTNPTLP 293
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 57/95 (60%), Gaps = 7/95 (7%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCT 72
+ ++FS +G V KI TF K FQ L+Q+ D TA SAK +LDG++I C
Sbjct: 212 LYEIFSRYGKVLKIVTFTKNNSFQVLIQYPDVVTAQSAKLSLDGQNI-------YTSCCK 264
Query: 73 LRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAI 107
LRI YS + L+VK+ + +SRDYTNP LP + +
Sbjct: 265 LRIEYSKLSSLNVKYNNDKSRDYTNPTLPNGDNTV 299
>gi|328788959|ref|XP_625087.3| PREDICTED: polypyrimidine tract-binding protein 2 [Apis mellifera]
Length = 449
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 51/102 (50%), Positives = 67/102 (65%), Gaps = 1/102 (0%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VL +E M Y ++LDVL+ +F+ FG V KI F KN QALIQY D+ +A AK +
Sbjct: 33 NTVLRVIVEQMVYPISLDVLYQIFTRFGKVLKIVTFTKNNTFQALIQYADMLSAQTAKLS 92
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
LEG IY+ C L I YS+ +L++K NND+SRDYT PS P
Sbjct: 93 LEGQNIYN-SCCTLRIDYSKMQNLNVKYNNDKSRDYTNPSLP 133
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 69/110 (62%), Gaps = 10/110 (9%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCT 72
+ Q+F+ FG V KI TF K FQAL+Q++D +A +AK +L+G++I CT
Sbjct: 52 LYQIFTRFGKVLKIVTFTKNNTFQALIQYADMLSAQTAKLSLEGQNIYNSC-------CT 104
Query: 73 LRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKL 122
LRI YS +L+VK+ + +SRDYTNP LP + +DA+ S+ L G+ L
Sbjct: 105 LRIDYSKMQNLNVKYNNDKSRDYTNPSLPTGDANLDAA---SLALGGELL 151
>gi|328712476|ref|XP_003244820.1| PREDICTED: polypyrimidine tract-binding protein 1-like isoform 2
[Acyrthosiphon pisum]
Length = 581
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 51/102 (50%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VL +E+M + ++LDVL+ +FS +G V KI F KN Q LIQYPDV TA AK +
Sbjct: 161 NTVLRVIVEHMVFPISLDVLYEIFSRYGKVLKIVTFTKNNSFQVLIQYPDVVTAQSAKLS 220
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
L+G IY CKL I YS+ + L++K NND+SRDYT P+ P
Sbjct: 221 LDGQNIYT-SCCKLRIEYSKLSSLNVKYNNDKSRDYTNPTLP 261
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 57/95 (60%), Gaps = 7/95 (7%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCT 72
+ ++FS +G V KI TF K FQ L+Q+ D TA SAK +LDG++I C
Sbjct: 180 LYEIFSRYGKVLKIVTFTKNNSFQVLIQYPDVVTAQSAKLSLDGQNI-------YTSCCK 232
Query: 73 LRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAI 107
LRI YS + L+VK+ + +SRDYTNP LP + +
Sbjct: 233 LRIEYSKLSSLNVKYNNDKSRDYTNPTLPNGDNTV 267
>gi|392341647|ref|XP_003754390.1| PREDICTED: LOW QUALITY PROTEIN: polypyrimidine tract-binding
protein 1-like [Rattus norvegicus]
gi|392349693|ref|XP_003750446.1| PREDICTED: LOW QUALITY PROTEIN: polypyrimidine tract-binding
protein 1-like [Rattus norvegicus]
Length = 558
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 94/167 (56%), Gaps = 11/167 (6%)
Query: 109 ASGQLSVGLDGKK-LEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGL 167
AS + +D K + +S+VL +EN+ Y VTLDVLH +FS FG + K+ MF KN
Sbjct: 162 ASAASTAAVDAKMVMAGQSSVLRIIVENLFYPVTLDVLHQIFSKFGTILKLIMFTKNNQF 221
Query: 168 QALIQYPDVQTAVVAKEALEGHCIYDGGFC-KLHISYSRHTDLSIKVNNDRSRDYTLPST 226
QAL+Q + AK +L+G IY C LHI +S+ T L++K NND+SRDY P
Sbjct: 222 QALLQDAGPVSTQHAKLSLDGQNIYSA--CXTLHIDFSKLTSLNVKYNNDKSRDYRQPGL 279
Query: 227 PMVNSQPSILGQQPVPMVGA----TANQYNGAQFAP--PPPEQPMMH 267
P +SQPS+ Q + G + +QY GA+F P P P +H
Sbjct: 280 PSGDSQPSV-DQTMAAVFGTLSIMSVSQYAGARFPPTFAIPXVPNVH 325
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 50/92 (54%), Gaps = 9/92 (9%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPC-TL 73
Q+FS FG + K+ F K FQAL+Q + + AK +LDG++I C TL
Sbjct: 201 QIFSKFGTILKLIMFTKNNQFQALLQDAGPVSTQHAKLSLDGQNI--------YSACXTL 252
Query: 74 RITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 105
I +S T L+VK+ + +SRDY P LP S
Sbjct: 253 HIDFSKLTSLNVKYNNDKSRDYRQPGLPSGDS 284
>gi|380018871|ref|XP_003693343.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Apis
florea]
Length = 578
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 61/146 (41%), Positives = 84/146 (57%), Gaps = 4/146 (2%)
Query: 85 VKFQSHRS--RDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN-VLLASIENMQYAVT 141
V+F +HR D T+ + + + GQ V + + N VL +E M Y ++
Sbjct: 144 VQFSNHRELKTDQTHTNNANSNNQVAIPGQNQVAQTQAETQGGPNTVLRVIVEQMVYPIS 203
Query: 142 LDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHI 201
LDVL+ +F+ FG V KI F KN QALIQY D+ +A AK +LEG IY+ C L I
Sbjct: 204 LDVLYQIFTRFGKVLKIVTFTKNNTFQALIQYADMLSAQTAKLSLEGQNIYN-SCCTLRI 262
Query: 202 SYSRHTDLSIKVNNDRSRDYTLPSTP 227
YS+ +L++K NND+SRDYT PS P
Sbjct: 263 DYSKMQNLNVKYNNDKSRDYTNPSLP 288
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 69/110 (62%), Gaps = 10/110 (9%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCT 72
+ Q+F+ FG V KI TF K FQAL+Q++D +A +AK +L+G++I CT
Sbjct: 207 LYQIFTRFGKVLKIVTFTKNNTFQALIQYADMLSAQTAKLSLEGQNIYN-------SCCT 259
Query: 73 LRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKL 122
LRI YS +L+VK+ + +SRDYTNP LP + +DA+ S+ L G+ L
Sbjct: 260 LRIDYSKMQNLNVKYNNDKSRDYTNPSLPTGDANLDAA---SLALGGELL 306
>gi|350418407|ref|XP_003491847.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Bombus
impatiens]
Length = 578
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 61/146 (41%), Positives = 84/146 (57%), Gaps = 4/146 (2%)
Query: 85 VKFQSHRS--RDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN-VLLASIENMQYAVT 141
V+F +HR D T+ + + + GQ V + + N VL +E M Y ++
Sbjct: 144 VQFSNHRELKTDQTHTNNANSNNQVALPGQNQVAQTQAETQGGPNTVLRVIVEQMVYPIS 203
Query: 142 LDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHI 201
LDVL+ +F+ FG V KI F KN QALIQY D+ +A AK +LEG IY+ C L I
Sbjct: 204 LDVLYQIFTRFGKVLKIVTFTKNNTFQALIQYADMLSAQTAKLSLEGQNIYN-SCCTLRI 262
Query: 202 SYSRHTDLSIKVNNDRSRDYTLPSTP 227
YS+ +L++K NND+SRDYT PS P
Sbjct: 263 DYSKMQNLNVKYNNDKSRDYTNPSLP 288
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 69/110 (62%), Gaps = 10/110 (9%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCT 72
+ Q+F+ FG V KI TF K FQAL+Q++D +A +AK +L+G++I CT
Sbjct: 207 LYQIFTRFGKVLKIVTFTKNNTFQALIQYADMLSAQTAKLSLEGQNIYNSC-------CT 259
Query: 73 LRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKL 122
LRI YS +L+VK+ + +SRDYTNP LP + +DA+ S+ L G+ L
Sbjct: 260 LRIDYSKMQNLNVKYNNDKSRDYTNPSLPTGDANLDAA---SLALGGELL 306
>gi|125827109|ref|XP_001335967.1| PREDICTED: regulator of differentiation 1 [Danio rerio]
Length = 522
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 74/118 (62%), Gaps = 1/118 (0%)
Query: 118 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 177
DG + +S VL +EN+ Y V+L+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 142 DGGMMPGQSPVLRIIVENLYYPVSLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPM 201
Query: 178 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
A AK AL+G IY+ G C L + +S+ T L++K NND+SRD+T P + QP++
Sbjct: 202 NAHHAKVALDGQNIYN-GCCTLRVEFSKLTSLNVKYNNDKSRDFTRLDLPSGDGQPTL 258
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 54/87 (62%), Gaps = 7/87 (8%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D A AK ALDG++I G CTLR
Sbjct: 171 QIFSKFGTVLKIITFTKNNQFQALLQYADPMNAHHAKVALDGQNIYN-------GCCTLR 223
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLP 101
+ +S T L+VK+ + +SRD+T LP
Sbjct: 224 VEFSKLTSLNVKYNNDKSRDFTRLDLP 250
>gi|328712480|ref|XP_003244821.1| PREDICTED: polypyrimidine tract-binding protein 1-like isoform 3
[Acyrthosiphon pisum]
Length = 632
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/102 (50%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VL +E+M + ++LDVL+ +FS +G V KI F KN Q LIQYPDV TA AK +
Sbjct: 193 NTVLRVIVEHMVFPISLDVLYEIFSRYGKVLKIVTFTKNNSFQVLIQYPDVVTAQSAKLS 252
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
L+G IY CKL I YS+ + L++K NND+SRDYT P+ P
Sbjct: 253 LDGQNIYT-SCCKLRIEYSKLSSLNVKYNNDKSRDYTNPTLP 293
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 57/95 (60%), Gaps = 7/95 (7%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCT 72
+ ++FS +G V KI TF K FQ L+Q+ D TA SAK +LDG++I C
Sbjct: 212 LYEIFSRYGKVLKIVTFTKNNSFQVLIQYPDVVTAQSAKLSLDGQNI-------YTSCCK 264
Query: 73 LRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAI 107
LRI YS + L+VK+ + +SRDYTNP LP + +
Sbjct: 265 LRIEYSKLSSLNVKYNNDKSRDYTNPTLPNGDNTV 299
>gi|359480737|ref|XP_003632518.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
isoform 2 [Vitis vinifera]
Length = 412
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 74/116 (63%), Gaps = 1/116 (0%)
Query: 112 QLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALI 171
Q S G G + + +LL +I ++ Y +T++VLH VFS G V+KI F K+ G QALI
Sbjct: 52 QNSQGRKGDQDAQPNRILLVTIHHLLYPITVEVLHQVFSPHGFVEKIVTFQKSAGFQALI 111
Query: 172 QYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
QY Q+AV A AL+G IYD G C+L I +S T+L + NN+RSRD+T PS P
Sbjct: 112 QYQSRQSAVSAINALQGRNIYD-GCCQLDIQFSNLTELQVNYNNERSRDFTNPSLP 166
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 60/94 (63%), Gaps = 7/94 (7%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + QVFS GFV KI TF+K+AGFQAL+Q+ ++A SA NAL GR+I
Sbjct: 80 ITVEVLHQVFSPHGFVEKIVTFQKSAGFQALIQYQSRQSAVSAINALQGRNIYD------ 133
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLP 101
G C L I +S T+L V + + RSRD+TNP LP
Sbjct: 134 -GCCQLDIQFSNLTELQVNYNNERSRDFTNPSLP 166
>gi|344271491|ref|XP_003407571.1| PREDICTED: regulator of differentiation 1 [Loxodonta africana]
Length = 581
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/118 (47%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 118 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 177
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 200 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 259
Query: 178 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
A A+ AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 260 NAHYARMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 316
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 53/89 (59%), Gaps = 7/89 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D A A+ ALDG++I CTLR
Sbjct: 229 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYARMALDGQNIYNAC-------CTLR 281
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVA 103
I +S T L+VK+ + +SRD+T LP
Sbjct: 282 IDFSKLTSLNVKYNNDKSRDFTRLDLPTG 310
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 81/198 (40%), Gaps = 22/198 (11%)
Query: 11 IFILQVFSAFGFVHKITT-FEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMG 69
+FIL F +G VH++ F K ALVQ +D A A N L G+ + +L
Sbjct: 404 LFIL--FGVYGDVHRVKIMFNKKE--NALVQMADANQAQLAMNHLSGQRLYGKVL----- 454
Query: 70 PCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVL 129
R T S H + + + + T + G + + + P S L
Sbjct: 455 ----RATLSKHQAVQLPREGQEDQGLTKDFSNSPLHRFKKPGSKNF----QNIFPPSATL 506
Query: 130 LASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGH 189
+ N+ +VT+D L +F+ G K F + ALIQ V+ A+ A L H
Sbjct: 507 --HLSNIPPSVTVDDLKNLFTDAGCSVKAFKFFQKDRKMALIQLGSVEEAIQALIELHNH 564
Query: 190 CIYDGGFCKLHISYSRHT 207
+ G L +S+S+ T
Sbjct: 565 DL--GENHHLRVSFSKST 580
>gi|357443611|ref|XP_003592083.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
gi|355481131|gb|AES62334.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
Length = 407
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 92/166 (55%), Gaps = 12/166 (7%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G+ EP + +LL +I ++ Y +T+DVL+ VFS G V+KI F K+ G QALIQY Q+
Sbjct: 55 GRGDEP-NRILLVTIHHVLYPITVDVLYQVFSPHGSVEKIVTFQKSAGFQALIQYQSQQS 113
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 238
++ A+ AL+G IYD G C+L I +S +L + NNDRSRD+T P+ P G+
Sbjct: 114 SITARTALQGRNIYD-GCCQLDIQFSNLDELQVNYNNDRSRDFTNPNLPTEQK-----GR 167
Query: 239 QPVPMVGATANQYNGAQFAPPP----PEQPMMHQPTAAGWGAVPPA 280
P G N Y G Q + P P+ P AA G +PP
Sbjct: 168 PPQLGYGDAGNMY-GVQGSGPRTVGYPQMPNAAAIAAAFGGGLPPG 212
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 111/236 (47%), Gaps = 45/236 (19%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + QVFS G V KI TF+K+AGFQAL+Q+ +++ +A+ AL GR+I
Sbjct: 75 ITVDVLYQVFSPHGSVEKIVTFQKSAGFQALIQYQSQQSSITARTALQGRNIYD------ 128
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS---------------AIDASGQ 112
G C L I +S +L V + + RSRD+TNP LP + SG
Sbjct: 129 -GCCQLDIQFSNLDELQVNYNNDRSRDFTNPNLPTEQKGRPPQLGYGDAGNMYGVQGSGP 187
Query: 113 LSVGL------------DGKKLEP------ESNVLLASIENMQYAVTLDVLHMVFSAFGP 154
+VG G L P + LL S N + D L +FS +G
Sbjct: 188 RTVGYPQMPNAAAIAAAFGGGLPPGITGTNDRCTLLVSNLNPD-RIDEDKLFNLFSLYGN 246
Query: 155 VQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLS 210
+ +I + +N ALIQ D A +A L+G ++D +L +++S+H +++
Sbjct: 247 IVRIKLL-RNKPDHALIQMGDGFQAELAVHFLKGAMLFDK---RLEVNFSKHPNIT 298
>gi|195391604|ref|XP_002054450.1| GJ22800 [Drosophila virilis]
gi|194152536|gb|EDW67970.1| GJ22800 [Drosophila virilis]
Length = 818
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/100 (50%), Positives = 64/100 (64%), Gaps = 1/100 (1%)
Query: 128 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 187
VL +E + Y V+LD+LH +F FG V KI F KN QALIQYPD +A AK L+
Sbjct: 434 VLRVIVETLMYPVSLDILHQIFQRFGKVLKIVTFTKNNSFQALIQYPDAHSAQQAKSILD 493
Query: 188 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
G IY+ G C L I S+ T L++K NND+SRD+T P+ P
Sbjct: 494 GQNIYN-GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALP 532
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 56/94 (59%), Gaps = 7/94 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+F FG V KI TF K FQAL+Q+ D +A AK+ LDG++I G CTLR
Sbjct: 453 QIFQRFGKVLKIVTFTKNNSFQALIQYPDAHSAQQAKSILDGQNIYN-------GCCTLR 505
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID 108
I S T L+VK+ + +SRD+TNP LP +D
Sbjct: 506 IDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVD 539
>gi|195055925|ref|XP_001994863.1| GH17472 [Drosophila grimshawi]
gi|193892626|gb|EDV91492.1| GH17472 [Drosophila grimshawi]
Length = 920
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 74/123 (60%), Gaps = 4/123 (3%)
Query: 105 SAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKN 164
SA++AS + G + + VL +E + Y V+LD+LH +F FG V KI F KN
Sbjct: 520 SAVNAS---AAGNNTNAAGGPNTVLRVIVETLMYPVSLDILHQIFQRFGKVLKIVTFTKN 576
Query: 165 GGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP 224
QALIQYPD +A AK L+G IY+ G C L I S+ T L++K NND+SRD+T P
Sbjct: 577 NSFQALIQYPDAHSAQQAKSILDGQNIYN-GCCTLRIDNSKLTALNVKYNNDKSRDFTNP 635
Query: 225 STP 227
+ P
Sbjct: 636 ALP 638
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 56/94 (59%), Gaps = 7/94 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+F FG V KI TF K FQAL+Q+ D +A AK+ LDG++I G CTLR
Sbjct: 559 QIFQRFGKVLKIVTFTKNNSFQALIQYPDAHSAQQAKSILDGQNIYN-------GCCTLR 611
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID 108
I S T L+VK+ + +SRD+TNP LP +D
Sbjct: 612 IDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVD 645
>gi|293335109|ref|NP_001169809.1| uncharacterized protein LOC100383701 [Zea mays]
gi|224031787|gb|ACN34969.1| unknown [Zea mays]
Length = 397
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 78/131 (59%), Gaps = 1/131 (0%)
Query: 97 NPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQ 156
N Y+ + + Q S G + + + +LL +I +M Y +T++VLH VF A+G V+
Sbjct: 25 NVYMQFSSHQELTTDQSSHGRNSDQESEPNRILLVTIHHMIYPITVEVLHQVFKAYGFVE 84
Query: 157 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 216
KI F K+ G QALIQ+ Q AV A +L G IYDG C+L I YS ++L + NND
Sbjct: 85 KIVTFQKSAGFQALIQFHSRQEAVEAFGSLHGRNIYDGC-CQLDIQYSNLSELQVHYNND 143
Query: 217 RSRDYTLPSTP 227
RSRD+T PS P
Sbjct: 144 RSRDFTNPSLP 154
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 111/236 (47%), Gaps = 48/236 (20%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + QVF A+GFV KI TF+K+AGFQAL+QF + A A +L GR+I
Sbjct: 68 ITVEVLHQVFKAYGFVEKIVTFQKSAGFQALIQFHSRQEAVEAFGSLHGRNIYD------ 121
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPV------------------------- 102
G C L I YS ++L V + + RSRD+TNP LP
Sbjct: 122 -GCCQLDIQYSNLSELQVHYNNDRSRDFTNPSLPTEQRPRASQQAYPDPANLYAFQQAGA 180
Query: 103 --------APSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGP 154
A A G L G+ G ++++++ N + + D L +FS +G
Sbjct: 181 SYAQMGRAAMIAAAFGGTLPHGVTGTN--ERCTLIVSNLNNDK--IDEDKLFNLFSLYGN 236
Query: 155 VQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLS 210
+ +I + +N AL++ D A +A L+G ++ KL ++YS++ +++
Sbjct: 237 IVRIKVL-RNKPDHALVEMADGLQAELAVHYLKGAILFGK---KLEVNYSKYPNIT 288
>gi|432091564|gb|ELK24589.1| Regulator of differentiation 1 [Myotis davidii]
Length = 524
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 93/197 (47%), Gaps = 34/197 (17%)
Query: 118 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 177
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 143 EGTMLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPL 202
Query: 178 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILG 237
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + PS+
Sbjct: 203 NAQYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGHPSL-- 259
Query: 238 QQPVPMVGATANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMPMMGNHPYMPPGS 297
E PM AA +GA P S P G + P
Sbjct: 260 ------------------------ESPM-----AAAFGA--PGIISSPYAGAAGFAPAIG 288
Query: 298 MPMGPGMMQMHMPGQSG 314
P G+ +PG G
Sbjct: 289 FPQATGLSVPGVPGALG 305
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 53/89 (59%), Gaps = 7/89 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 172 QIFSKFGTVLKIITFTKNNQFQALLQYADPLNAQYAKMALDGQNIYN-------ACCTLR 224
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVA 103
I +S T L+VK+ + +SRD+T LP
Sbjct: 225 IDFSKLTSLNVKYNNDKSRDFTRLDLPTG 253
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 82/198 (41%), Gaps = 22/198 (11%)
Query: 11 IFILQVFSAFGFVHKITT-FEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMG 69
+FIL F +G VH++ F K ALVQ +D A A N L+G+ + +L
Sbjct: 347 LFIL--FGVYGDVHRVKIMFNKKE--NALVQMADANQAQLAMNHLNGQRLYGKVL----- 397
Query: 70 PCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVL 129
R T S H + + + + T + G + + + P S L
Sbjct: 398 ----RATLSKHQAVQLPREGQEDQGLTKDFSNSPLHRFKKPGSKNF----QNIFPPSATL 449
Query: 130 LASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGH 189
+ N+ +VT+D L +F+ G K F + ALIQ V+ A+ A L H
Sbjct: 450 --HLSNIPPSVTMDDLKNLFTEAGCSVKAFKFFQKDRKMALIQLGSVEEAIQALIELHNH 507
Query: 190 CIYDGGFCKLHISYSRHT 207
+ G L +S+S+ T
Sbjct: 508 DL--GENHHLRVSFSKST 523
>gi|308509766|ref|XP_003117066.1| CRE-PTB-1 protein [Caenorhabditis remanei]
gi|308241980|gb|EFO85932.1| CRE-PTB-1 protein [Caenorhabditis remanei]
Length = 436
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/127 (44%), Positives = 80/127 (62%), Gaps = 4/127 (3%)
Query: 103 APSAID--ASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAM 160
AP+ D A+G +S G + +P S VL IENM + V+L+VLH +F+ FG V +I
Sbjct: 25 APANTDSVANGSVSNFEVGTQQQPNS-VLRTIIENMMFPVSLEVLHQLFARFGKVLRIIT 83
Query: 161 FDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRD 220
F KN QAL+Q + +A +AK+ LE +Y+G C L I YS+ + L++K NND+SRD
Sbjct: 84 FSKNNTFQALVQMSEANSAQLAKQGLENQNVYNGC-CTLRIDYSKLSTLNVKYNNDKSRD 142
Query: 221 YTLPSTP 227
YT P+ P
Sbjct: 143 YTNPNLP 149
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 59/101 (58%), Gaps = 7/101 (6%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+F+ FG V +I TF K FQALVQ S+ +A AK L+ +++ G CTLR
Sbjct: 70 QLFARFGKVLRIITFSKNNTFQALVQMSEANSAQLAKQGLENQNVYN-------GCCTLR 122
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSV 115
I YS + L+VK+ + +SRDYTNP LP I+ + +S
Sbjct: 123 IDYSKLSTLNVKYNNDKSRDYTNPNLPAGEMTIEQTLAMST 163
>gi|195354540|ref|XP_002043755.1| GM16408 [Drosophila sechellia]
gi|194128955|gb|EDW50998.1| GM16408 [Drosophila sechellia]
Length = 792
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 74/123 (60%), Gaps = 9/123 (7%)
Query: 105 SAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKN 164
SA++A G + G + VL +E++ Y V+LDVLH +F +G V KI F KN
Sbjct: 393 SAVNAGGNAAGG--------PNTVLRVIVESLMYPVSLDVLHQIFQRYGKVLKIVTFTKN 444
Query: 165 GGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP 224
QALIQYPD +A AK L+G IY+ G C L I S+ T L++K NND+SRD+T P
Sbjct: 445 NSFQALIQYPDANSAQHAKSLLDGQNIYN-GCCTLRIDNSKLTALNVKYNNDKSRDFTNP 503
Query: 225 STP 227
+ P
Sbjct: 504 ALP 506
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 56/94 (59%), Gaps = 7/94 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+F +G V KI TF K FQAL+Q+ D +A AK+ LDG++I G CTLR
Sbjct: 427 QIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLDGQNIYN-------GCCTLR 479
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID 108
I S T L+VK+ + +SRD+TNP LP +D
Sbjct: 480 IDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVD 513
>gi|444730196|gb|ELW70586.1| Regulator of differentiation 1 [Tupaia chinensis]
Length = 386
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 118 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 177
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 139 EGPVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 198
Query: 178 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 199 NAHYAKMALDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 255
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 101/227 (44%), Gaps = 43/227 (18%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 168 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYN-------ACCTLR 220
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPV------------------APSAIDASGQLSV- 115
I +S T L+VK+ + +SRD+T LP P+ A G L++
Sbjct: 221 IDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSLESPMAAAFGLSVPTVPGALGPLAIT 280
Query: 116 --------GLDGKKLEPESNVLLASIENMQ-------YAVTLDVLHMVFSAFGPVQKIAM 160
+ G P ++VLL + N + + +D L +F G K
Sbjct: 281 SSAVTGRMAIPGASGIPGNSVLLVTNLNPDLITPHGLFILFVDDLKNLFIEAGCSVKAFK 340
Query: 161 FDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHT 207
F + ALIQ V+ A+ A L H + G L +S+S+ T
Sbjct: 341 FFQKDRKMALIQLGSVEEAIQALIELHNHDL--GENHHLRVSFSKST 385
>gi|195110769|ref|XP_001999952.1| GI22798 [Drosophila mojavensis]
gi|193916546|gb|EDW15413.1| GI22798 [Drosophila mojavensis]
Length = 834
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/100 (50%), Positives = 64/100 (64%), Gaps = 1/100 (1%)
Query: 128 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 187
VL +E + Y V+LD+LH +F FG V KI F KN QALIQYPD +A AK L+
Sbjct: 450 VLRVIVETLMYPVSLDILHQIFQRFGKVLKIVTFTKNNSFQALIQYPDAHSAQQAKSILD 509
Query: 188 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
G IY+ G C L I S+ T L++K NND+SRD+T P+ P
Sbjct: 510 GQNIYN-GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALP 548
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 56/94 (59%), Gaps = 7/94 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+F FG V KI TF K FQAL+Q+ D +A AK+ LDG++I G CTLR
Sbjct: 469 QIFQRFGKVLKIVTFTKNNSFQALIQYPDAHSAQQAKSILDGQNIYN-------GCCTLR 521
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID 108
I S T L+VK+ + +SRD+TNP LP +D
Sbjct: 522 IDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVD 555
>gi|281210224|gb|EFA84392.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 468
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/125 (44%), Positives = 76/125 (60%), Gaps = 5/125 (4%)
Query: 122 LEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 181
+E +N+LL +I N+ Y VT+DVL+ +FS +G V KI +F K+G Q+LIQ +A+
Sbjct: 132 VETPNNILLVTISNIIYPVTIDVLYQLFSKYGSVLKILIFSKSGNFQSLIQLHTTDSAIN 191
Query: 182 AKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT----LPSTPMVNSQPSILG 237
AK L+G IY+G C L I YS +L IK NND+SRD+T LP T + S P G
Sbjct: 192 AKRELDGQNIYNGC-CTLKIQYSSLNNLRIKYNNDKSRDFTNPTLLPGTTSLLSNPIGFG 250
Query: 238 QQPVP 242
P P
Sbjct: 251 ISPAP 255
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 56/88 (63%), Gaps = 7/88 (7%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCT 72
+ Q+FS +G V KI F K+ FQ+L+Q T++A +AK LDG++I G CT
Sbjct: 155 LYQLFSKYGSVLKILIFSKSGNFQSLIQLHTTDSAINAKRELDGQNIYN-------GCCT 207
Query: 73 LRITYSAHTDLSVKFQSHRSRDYTNPYL 100
L+I YS+ +L +K+ + +SRD+TNP L
Sbjct: 208 LKIQYSSLNNLRIKYNNDKSRDFTNPTL 235
>gi|195575404|ref|XP_002105669.1| GD16206 [Drosophila simulans]
gi|194201596|gb|EDX15172.1| GD16206 [Drosophila simulans]
Length = 792
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 74/123 (60%), Gaps = 9/123 (7%)
Query: 105 SAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKN 164
SA++A G + G + VL +E++ Y V+LDVLH +F +G V KI F KN
Sbjct: 393 SAVNAGGNAAGG--------PNTVLRVIVESLMYPVSLDVLHQIFQRYGKVLKIVTFTKN 444
Query: 165 GGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP 224
QALIQYPD +A AK L+G IY+ G C L I S+ T L++K NND+SRD+T P
Sbjct: 445 NSFQALIQYPDANSAQHAKSLLDGQNIYN-GCCTLRIDNSKLTALNVKYNNDKSRDFTNP 503
Query: 225 STP 227
+ P
Sbjct: 504 ALP 506
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 56/94 (59%), Gaps = 7/94 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+F +G V KI TF K FQAL+Q+ D +A AK+ LDG++I G CTLR
Sbjct: 427 QIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLDGQNIYN-------GCCTLR 479
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID 108
I S T L+VK+ + +SRD+TNP LP +D
Sbjct: 480 IDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVD 513
>gi|417411514|gb|JAA52191.1| Putative polypyrimidine tract-binding protein, partial [Desmodus
rotundus]
Length = 541
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/118 (47%), Positives = 72/118 (61%), Gaps = 1/118 (0%)
Query: 118 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 177
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 160 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPL 219
Query: 178 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + PS+
Sbjct: 220 NAQYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGHPSL 276
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 53/89 (59%), Gaps = 7/89 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 189 QIFSKFGTVLKIITFTKNNQFQALLQYADPLNAQYAKMALDGQNIYN-------ACCTLR 241
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVA 103
I +S T L+VK+ + +SRD+T LP
Sbjct: 242 IDFSKLTSLNVKYNNDKSRDFTRLDLPTG 270
Score = 40.8 bits (94), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 81/198 (40%), Gaps = 22/198 (11%)
Query: 11 IFILQVFSAFGFVHKITT-FEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMG 69
+FIL F +G VH++ F K ALVQ +D A A N L G+ + +L
Sbjct: 364 LFIL--FGVYGDVHRVKIMFNKKE--NALVQMADANQAQLAMNHLSGQRLYGKVL----- 414
Query: 70 PCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVL 129
R T S H + + + + T + G + + + P S L
Sbjct: 415 ----RATLSKHQTVQLPREGQEDQGLTKDFSNSPLHRFKKPGSKNF----QNIFPPSATL 466
Query: 130 LASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGH 189
+ N+ +VT+D L +F+ G K F + ALIQ V+ A+ A L H
Sbjct: 467 --HLSNIPPSVTMDDLKNLFTEAGCTVKAFKFFQKDRKMALIQLESVEEAIQALIELHNH 524
Query: 190 CIYDGGFCKLHISYSRHT 207
+ G L +S+S+ T
Sbjct: 525 DL--GENHHLRVSFSKST 540
>gi|348540154|ref|XP_003457553.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Oreochromis
niloticus]
Length = 511
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/107 (50%), Positives = 68/107 (63%), Gaps = 1/107 (0%)
Query: 128 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 187
VL I+NM Y VTLDVL +FS FG V KI F KN QAL+Q+ D +A AK AL+
Sbjct: 167 VLRIIIDNMFYPVTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFSDPVSAQQAKLALD 226
Query: 188 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPS 234
G IY+ C L I +S+ +L++K NND+SRDYT P P + QPS
Sbjct: 227 GQNIYNSC-CTLRIDFSKLVNLNVKYNNDKSRDYTRPELPAGDGQPS 272
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 81/238 (34%), Positives = 114/238 (47%), Gaps = 48/238 (20%)
Query: 3 LTLSLLKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRY 62
+TL +L+ Q+FS FG V KI TF K FQAL+QFSD +A AK ALDG++I
Sbjct: 179 VTLDVLQ-----QIFSKFGTVMKIITFTKNNQFQALLQFSDPVSAQQAKLALDGQNIYN- 232
Query: 63 LLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVA---PS---------AIDAS 110
CTLRI +S +L+VK+ + +SRDYT P LP PS + D+S
Sbjct: 233 ------SCCTLRIDFSKLVNLNVKYNNDKSRDYTRPELPAGDGQPSFDPTVAVAFSKDSS 286
Query: 111 GQL-----------------SVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFG 153
L V L G+ S VLL S N + VT L +F +G
Sbjct: 287 SLLGALNPLSAAAAAAAAAGRVALTGQ--TGSSGVLLVSNLN-EEMVTPQSLFTLFGVYG 343
Query: 154 PVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 211
VQ++ + N ALIQ + A +A L G +Y G + ++ S+H +++
Sbjct: 344 DVQRVKIL-YNKKDSALIQMSESNQAQLAMSHLNGQKMY-GKIIR--VTLSKHQTVAL 397
>gi|57004|emb|CAA43203.1| pyrimidine binding protein 2 [Rattus norvegicus]
Length = 367
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/124 (49%), Positives = 76/124 (61%), Gaps = 6/124 (4%)
Query: 135 NMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDG 194
N+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +A AK +L+G IY+
Sbjct: 1 NLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN- 59
Query: 195 GFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGA----TANQ 250
C L I +S+ T L++K NND+SRDYT P P +SQPS L Q GA +A+
Sbjct: 60 ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQTMAAAFGAPGIMSASP 118
Query: 251 YNGA 254
Y GA
Sbjct: 119 YAGA 122
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 56/91 (61%), Gaps = 7/91 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 13 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 65
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 105
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 66 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 96
>gi|67678144|gb|AAH97557.1| VgRBP60 protein [Xenopus laevis]
Length = 472
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/117 (47%), Positives = 73/117 (62%), Gaps = 1/117 (0%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVL +FS FG V KI F KN QAL+QY D +
Sbjct: 177 GIAMSGQSPVLRIIVENLFYPVTLDVLQQIFSKFGTVLKIITFTKNNQFQALLQYGDPVS 236
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P + QPS+
Sbjct: 237 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDGQPSL 292
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 60/99 (60%), Gaps = 12/99 (12%)
Query: 3 LTLSLLKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRY 62
+TL +L+ Q+FS FG V KI TF K FQAL+Q+ D +A AK +LDG++I
Sbjct: 198 VTLDVLQ-----QIFSKFGTVLKIITFTKNNQFQALLQYGDPVSAQHAKLSLDGQNIYN- 251
Query: 63 LLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLP 101
CTLRI +S T L+VK+ + +SRDYT P LP
Sbjct: 252 ------ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLP 284
>gi|432964272|ref|XP_004086906.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Oryzias
latipes]
Length = 541
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 85/161 (52%), Gaps = 9/161 (5%)
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIE 134
+ +S H +L S R++ V P + L+ S VL I+
Sbjct: 148 VQFSNHKELKTDAASQRTQAVLQAVSAVQPPGSEVQDVLAAA--------SSPVLRIIID 199
Query: 135 NMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDG 194
NM Y VTLDVL +FS FG V KI F KN QAL+QY D A AK AL+G IY+
Sbjct: 200 NMFYPVTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQYSDPVQAQHAKLALDGQNIYN- 258
Query: 195 GFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
C L I +S+ +L++K NND+SRDY+ P P +S+P++
Sbjct: 259 SCCTLRIDFSKLVNLNVKYNNDKSRDYSRPELPAGDSRPTL 299
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 112/240 (46%), Gaps = 48/240 (20%)
Query: 3 LTLSLLKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRY 62
+TL +L+ Q+FS FG V KI TF K FQAL+Q+SD A AK ALDG++I
Sbjct: 205 VTLDVLQ-----QIFSKFGTVMKIITFTKNNQFQALLQYSDPVQAQHAKLALDGQNIYN- 258
Query: 63 LLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS--AIDASGQLSVGLDGK 120
CTLRI +S +L+VK+ + +SRDY+ P LP S +D S ++ D
Sbjct: 259 ------SCCTLRIDFSKLVNLNVKYNNDKSRDYSRPELPAGDSRPTLDPSVAAALSKDST 312
Query: 121 --------KLEPES---------------------NVLLASIENMQYAVTLDVLHMVFSA 151
L P S VLLAS N + VT L +F
Sbjct: 313 PLLCKIPGALNPLSAAAAAAAAAGRVALPGQAGSGGVLLASNLN-EEMVTPQSLFTLFGV 371
Query: 152 FGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 211
+G VQ++ + N ALIQ D A +A L G +Y G + ++ S+H +++
Sbjct: 372 YGDVQRVKIL-YNKKDSALIQMCDPSQAQLAMSHLNGQKMY-GKIIR--VTLSKHQSVAL 427
>gi|431918462|gb|ELK17686.1| Regulator of differentiation 1 [Pteropus alecto]
Length = 523
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/118 (47%), Positives = 72/118 (61%), Gaps = 1/118 (0%)
Query: 118 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 177
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 142 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPL 201
Query: 178 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + PS+
Sbjct: 202 NAQYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGHPSL 258
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 53/89 (59%), Gaps = 7/89 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 171 QIFSKFGTVLKIITFTKNNQFQALLQYADPLNAQYAKMALDGQNIYN-------ACCTLR 223
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVA 103
I +S T L+VK+ + +SRD+T LP
Sbjct: 224 IDFSKLTSLNVKYNNDKSRDFTRLDLPTG 252
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 81/198 (40%), Gaps = 22/198 (11%)
Query: 11 IFILQVFSAFGFVHKITT-FEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMG 69
+FIL F +G VH++ F K ALVQ +D A A N L G+ + +L
Sbjct: 346 LFIL--FGVYGDVHRVKIMFNKKE--NALVQMADANQAQLAMNHLSGQRLYGKVL----- 396
Query: 70 PCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVL 129
R T S H + + + + T + G + + + P S L
Sbjct: 397 ----RATLSKHQAVQLPREGQEDQGLTKDFSNSPLHRFKKPGSKNF----QNIFPPSATL 448
Query: 130 LASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGH 189
+ N+ +VT+D L +F+ G K F + ALIQ V+ A+ A L H
Sbjct: 449 --HLSNIPPSVTMDDLKNLFTEAGCSVKAFKFFQKDRKMALIQLGSVEEAIQALIELHNH 506
Query: 190 CIYDGGFCKLHISYSRHT 207
+ G L +S+S+ T
Sbjct: 507 DL--GENHHLRVSFSKST 522
>gi|348556107|ref|XP_003463864.1| PREDICTED: regulator of differentiation 1-like [Cavia porcellus]
Length = 688
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 70/111 (63%), Gaps = 1/111 (0%)
Query: 125 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 184
+S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 314 QSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKM 373
Query: 185 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 374 ALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPSGDGQPSL 423
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 98/232 (42%), Gaps = 64/232 (27%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 336 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYNAC-------CTLR 388
Query: 75 ITYSAHTDLSVKFQSHRSRDYT----------------------------NPY------- 99
I +S T L+VK+ + +SRD+T +PY
Sbjct: 389 IDFSKLTSLNVKYNNDKSRDFTRLDLPSGDGQPSLEPPMAAAFGAPGIISSPYAGAAGFA 448
Query: 100 ------------LPVAPSAIDASGQLSVGLDGKKLEPES------NVLLASIENMQYAVT 141
+P P A+ S + G+ P + +VLL + N +T
Sbjct: 449 PAIGFPQATGLSVPAVPGALGPLALTSSAITGRMAIPGASGIPGNSVLLVTNLNPDL-IT 507
Query: 142 LDVLHMVFSAFGPVQKIA-MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 192
L ++F +G V ++ MF+K AL+Q D A +A L G +Y
Sbjct: 508 PHGLFILFGVYGDVHRVKIMFNKKE--NALVQMADANQAQLAMNHLSGQRLY 557
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 81/198 (40%), Gaps = 22/198 (11%)
Query: 11 IFILQVFSAFGFVHKITT-FEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMG 69
+FIL F +G VH++ F K ALVQ +D A A N L G+ + +L
Sbjct: 511 LFIL--FGVYGDVHRVKIMFNKKE--NALVQMADANQAQLAMNHLSGQRLYGKVL----- 561
Query: 70 PCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVL 129
R T S H + + + + T + G + + + P S L
Sbjct: 562 ----RATLSKHQTVQLPREGQEDQGLTKDFSNSPLHRFKKPGSKNF----QNIFPPSATL 613
Query: 130 LASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGH 189
+ N+ +VT+D L +F+ G K F + ALIQ V+ A+ A L H
Sbjct: 614 --HLSNIPPSVTMDDLKNLFTEAGCSVKAFKFFQKDRKMALIQLGSVEEAIQALIELHNH 671
Query: 190 CIYDGGFCKLHISYSRHT 207
+ G L +S+S+ T
Sbjct: 672 DL--GENHHLRVSFSKST 687
>gi|193786069|dbj|BAG50959.1| unnamed protein product [Homo sapiens]
Length = 457
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/118 (47%), Positives = 72/118 (61%), Gaps = 1/118 (0%)
Query: 118 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 177
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 76 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 135
Query: 178 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
A AK AL+G IY+ C L I +S+ L++K NND+SRD+T P + QPS+
Sbjct: 136 NAHYAKMALDGQNIYNAC-CTLRIDFSKLISLNVKYNNDKSRDFTRLDLPTGDGQPSL 192
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 52/87 (59%), Gaps = 7/87 (8%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 105 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYN-------ACCTLR 157
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLP 101
I +S L+VK+ + +SRD+T LP
Sbjct: 158 IDFSKLISLNVKYNNDKSRDFTRLDLP 184
>gi|449441199|ref|XP_004138370.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
isoform 2 [Cucumis sativus]
Length = 408
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/133 (45%), Positives = 80/133 (60%), Gaps = 7/133 (5%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G+ EP + +LL +I +M Y +T++VLH VF G V+KI F K+ G QALIQY Q
Sbjct: 56 GRGDEP-NRILLVTIHHMLYPITVEVLHQVFFPHGFVEKIVTFQKSAGFQALIQYQTRQC 114
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 238
AV A+ AL+G IYDG C+L I +S +L + NN+RSRD+T PS P S+P G+
Sbjct: 115 AVSARTALQGRNIYDGC-CQLDIQFSNLDELQVNYNNERSRDFTNPSLP---SEPK--GR 168
Query: 239 QPVPMVGATANQY 251
P G T Y
Sbjct: 169 SSQPGYGDTGGMY 181
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 111/237 (46%), Gaps = 47/237 (19%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + QVF GFV KI TF+K+AGFQAL+Q+ + A SA+ AL GR+I
Sbjct: 76 ITVEVLHQVFFPHGFVEKIVTFQKSAGFQALIQYQTRQCAVSARTALQGRNIYD------ 129
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSA---------------IDASGQ 112
G C L I +S +L V + + RSRD+TNP LP P + SG
Sbjct: 130 -GCCQLDIQFSNLDELQVNYNNERSRDFTNPSLPSEPKGRSSQPGYGDTGGMYPLQPSGA 188
Query: 113 LSVGLD------------GKKLEP-------ESNVLLASIENMQYAVTLDVLHMVFSAFG 153
VG G L P VL++++ + + D L +FS +G
Sbjct: 189 RPVGFSQMANAAAVAAAFGGGLPPGVSGTNDRCTVLVSNLNPDR--IDEDKLFNLFSIYG 246
Query: 154 PVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLS 210
+ +I + +N AL+Q D A +A L+G ++ +L +++S+H +++
Sbjct: 247 NIVRIKLL-RNKPDHALVQMGDGFQAELAVHFLKGAMLFGK---RLEVNFSKHPNIT 299
>gi|213513392|ref|NP_001133760.1| Polypyrimidine tract-binding protein 1 [Salmo salar]
gi|209155238|gb|ACI33851.1| Polypyrimidine tract-binding protein 1 [Salmo salar]
Length = 574
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/108 (47%), Positives = 70/108 (64%), Gaps = 1/108 (0%)
Query: 117 LDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDV 176
+ + + +S VL +EN+ Y VTL+VLH +FS +G V KI F KN QAL+QY D
Sbjct: 189 MGARGMATQSPVLRVIVENLFYPVTLEVLHQIFSKYGSVLKIITFTKNNQFQALVQYADP 248
Query: 177 QTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP 224
TA K +L+G IY+ G C L +S+S+ T L++K NND+SRDYT P
Sbjct: 249 MTAQHTKMSLDGQNIYN-GCCTLRVSFSKLTSLNVKFNNDKSRDYTRP 295
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 55/86 (63%), Gaps = 7/86 (8%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS +G V KI TF K FQALVQ++D TA K +LDG++I G CTLR
Sbjct: 219 QIFSKYGSVLKIITFTKNNQFQALVQYADPMTAQHTKMSLDGQNIYN-------GCCTLR 271
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYL 100
+++S T L+VKF + +SRDYT P L
Sbjct: 272 VSFSKLTSLNVKFNNDKSRDYTRPDL 297
>gi|223647470|gb|ACN10493.1| Polypyrimidine tract-binding protein 1 [Salmo salar]
Length = 574
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/108 (47%), Positives = 70/108 (64%), Gaps = 1/108 (0%)
Query: 117 LDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDV 176
+ + + +S VL +EN+ Y VTL+VLH +FS +G V KI F KN QAL+QY D
Sbjct: 189 MGARGMATQSPVLRVIVENLFYPVTLEVLHQIFSKYGSVLKIITFTKNNQFQALVQYADP 248
Query: 177 QTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP 224
TA K +L+G IY+ G C L +S+S+ T L++K NND+SRDYT P
Sbjct: 249 MTAQHTKMSLDGQNIYN-GCCTLRVSFSKLTSLNVKFNNDKSRDYTRP 295
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 55/86 (63%), Gaps = 7/86 (8%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS +G V KI TF K FQALVQ++D TA K +LDG++I G CTLR
Sbjct: 219 QIFSKYGSVLKIITFTKNNQFQALVQYADPMTAQHTKMSLDGQNIYN-------GCCTLR 271
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYL 100
+++S T L+VKF + +SRDYT P L
Sbjct: 272 VSFSKLTSLNVKFNNDKSRDYTRPDL 297
>gi|351710810|gb|EHB13729.1| Regulator of differentiation 1, partial [Heterocephalus glaber]
Length = 539
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 70/111 (63%), Gaps = 1/111 (0%)
Query: 125 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 184
+S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 165 QSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKM 224
Query: 185 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 225 ALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPSGDGQPSL 274
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 53/87 (60%), Gaps = 7/87 (8%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 187 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYN-------ACCTLR 239
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLP 101
I +S T L+VK+ + +SRD+T LP
Sbjct: 240 IDFSKLTSLNVKYNNDKSRDFTRLDLP 266
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 81/198 (40%), Gaps = 22/198 (11%)
Query: 11 IFILQVFSAFGFVHKITT-FEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMG 69
+FIL F +G VH++ F K ALVQ +D A A N L G+ + +L
Sbjct: 362 LFIL--FGVYGDVHRVKIMFNKKE--NALVQMADAHQAQLAMNHLSGQRLYGKVL----- 412
Query: 70 PCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVL 129
R T S H + + + + T + G + + + P S L
Sbjct: 413 ----RATLSKHQTVQLPREGQEDQGLTKDFSNSPLHRFKKPGSKNF----QNIFPPSATL 464
Query: 130 LASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGH 189
+ N+ +VT+D L +F+ G K F + ALIQ V+ A+ A L H
Sbjct: 465 --HLSNIPPSVTMDDLKNIFTEAGCSVKAFKFFQKDRKMALIQLGSVEEAIQALIELHNH 522
Query: 190 CIYDGGFCKLHISYSRHT 207
+ G L +S+S+ T
Sbjct: 523 DL--GENHHLRVSFSKST 538
>gi|194904631|ref|XP_001981034.1| GG11844 [Drosophila erecta]
gi|190655672|gb|EDV52904.1| GG11844 [Drosophila erecta]
Length = 800
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 74/123 (60%), Gaps = 6/123 (4%)
Query: 105 SAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKN 164
SA+ A+G + G + VL +E++ Y V+LD+LH +F +G V KI F KN
Sbjct: 398 SAVSAAGNNTNSAGG-----PNTVLRVIVESLMYPVSLDILHQIFQRYGKVLKIVTFTKN 452
Query: 165 GGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP 224
QALIQYPD +A AK L+G IY+ G C L I S+ T L++K NND+SRD+T P
Sbjct: 453 NSFQALIQYPDANSAQHAKSLLDGQNIYN-GCCTLRIDNSKLTALNVKYNNDKSRDFTNP 511
Query: 225 STP 227
+ P
Sbjct: 512 ALP 514
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 56/94 (59%), Gaps = 7/94 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+F +G V KI TF K FQAL+Q+ D +A AK+ LDG++I G CTLR
Sbjct: 435 QIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLDGQNIYN-------GCCTLR 487
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID 108
I S T L+VK+ + +SRD+TNP LP +D
Sbjct: 488 IDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVD 521
>gi|195505570|ref|XP_002099562.1| GE23291 [Drosophila yakuba]
gi|194185663|gb|EDW99274.1| GE23291 [Drosophila yakuba]
Length = 802
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 74/123 (60%), Gaps = 6/123 (4%)
Query: 105 SAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKN 164
SA+ A+G + G + VL +E++ Y V+LD+LH +F +G V KI F KN
Sbjct: 404 SAVSAAGNNTNSAGG-----PNTVLRVIVESLMYPVSLDILHQIFQRYGKVLKIVTFTKN 458
Query: 165 GGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP 224
QALIQYPD +A AK L+G IY+ G C L I S+ T L++K NND+SRD+T P
Sbjct: 459 NSFQALIQYPDANSAQHAKSLLDGQNIYN-GCCTLRIDNSKLTALNVKYNNDKSRDFTNP 517
Query: 225 STP 227
+ P
Sbjct: 518 ALP 520
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 56/94 (59%), Gaps = 7/94 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+F +G V KI TF K FQAL+Q+ D +A AK+ LDG++I G CTLR
Sbjct: 441 QIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLDGQNIYN-------GCCTLR 493
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID 108
I S T L+VK+ + +SRD+TNP LP +D
Sbjct: 494 IDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVD 527
>gi|341888906|gb|EGT44841.1| CBN-PTB-1 protein [Caenorhabditis brenneri]
Length = 509
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 75/119 (63%), Gaps = 2/119 (1%)
Query: 109 ASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQ 168
A+G +S G + +P S VL IENM + V+LDVLH +F+ +G V +I F KN Q
Sbjct: 107 ANGSVSNFEVGTQQQPNS-VLRTIIENMMFPVSLDVLHQLFARYGKVLRIITFSKNNTFQ 165
Query: 169 ALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
AL+Q + +A +AK LE +Y+G C L I YS+ + L++K NND+SRDYT P+ P
Sbjct: 166 ALVQMSEANSAQLAKAGLENQNVYNGC-CTLRIDYSKLSTLNVKYNNDKSRDYTNPNLP 223
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 59/100 (59%), Gaps = 7/100 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+F+ +G V +I TF K FQALVQ S+ +A AK L+ +++ G CTLR
Sbjct: 144 QLFARYGKVLRIITFSKNNTFQALVQMSEANSAQLAKAGLENQNVYN-------GCCTLR 196
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLS 114
I YS + L+VK+ + +SRDYTNP LP I+ S LS
Sbjct: 197 IDYSKLSTLNVKYNNDKSRDYTNPNLPAGEMTIEQSLALS 236
>gi|386766857|ref|NP_001247399.1| hephaestus, isoform Y [Drosophila melanogaster]
gi|383293058|gb|AFH06716.1| hephaestus, isoform Y [Drosophila melanogaster]
Length = 898
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 66/102 (64%), Gaps = 1/102 (0%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VL +E++ Y V+LD+LH +F +G V KI F KN QALIQYPD +A AK
Sbjct: 516 NTVLRVIVESLMYPVSLDILHQIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSL 575
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
L+G IY+ G C L I S+ T L++K NND+SRD+T P+ P
Sbjct: 576 LDGQNIYN-GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALP 616
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 56/94 (59%), Gaps = 7/94 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+F +G V KI TF K FQAL+Q+ D +A AK+ LDG++I G CTLR
Sbjct: 537 QIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLDGQNIYN-------GCCTLR 589
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID 108
I S T L+VK+ + +SRD+TNP LP +D
Sbjct: 590 IDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVD 623
>gi|386766855|ref|NP_001247398.1| hephaestus, isoform W [Drosophila melanogaster]
gi|383293057|gb|AFH06715.1| hephaestus, isoform W [Drosophila melanogaster]
Length = 799
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 65/100 (65%), Gaps = 1/100 (1%)
Query: 128 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 187
VL +E++ Y V+LD+LH +F +G V KI F KN QALIQYPD +A AK L+
Sbjct: 419 VLRVIVESLMYPVSLDILHQIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLD 478
Query: 188 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
G IY+ G C L I S+ T L++K NND+SRD+T P+ P
Sbjct: 479 GQNIYN-GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALP 517
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 56/94 (59%), Gaps = 7/94 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+F +G V KI TF K FQAL+Q+ D +A AK+ LDG++I G CTLR
Sbjct: 438 QIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLDGQNIYN-------GCCTLR 490
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID 108
I S T L+VK+ + +SRD+TNP LP +D
Sbjct: 491 IDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVD 524
>gi|168017642|ref|XP_001761356.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687362|gb|EDQ73745.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 441
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 120/241 (49%), Gaps = 46/241 (19%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETA-------SSAKNALDGRSIPRYLLP 65
+LQ+ +FG V K+ A QAL+Q D +A ++ + ++ GR++
Sbjct: 22 LLQLAQSFGVVQKVVMLR--AKNQALLQMQDVPSAINVMQYYTTVQPSVRGRNV------ 73
Query: 66 ENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPE 125
+ +S+H +L+ Q+ ++R LP ++L P
Sbjct: 74 --------YMQFSSHKELTTPDQNGQTRR-----LPAE----------------QELLP- 103
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ +LL +I N Y +T+DVLH VFS G V+KI F K+ GLQAL+QY +AV A+
Sbjct: 104 NRILLITIHNPLYPITVDVLHQVFSPHGFVEKIVTFTKSAGLQALLQYASQPSAVQARTT 163
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 245
L+G IYDG C L I YS +L + NN+R+RD+T + P S+P G + ++G
Sbjct: 164 LQGRNIYDGC-CTLDIQYSNLQELQVNYNNERTRDFTNAALPSEQSRPGNSGNNIMVLLG 222
Query: 246 A 246
Sbjct: 223 C 223
>gi|28571965|ref|NP_788780.1| hephaestus, isoform H [Drosophila melanogaster]
gi|281362946|ref|NP_001163787.1| hephaestus, isoform O [Drosophila melanogaster]
gi|281362952|ref|NP_001163790.1| hephaestus, isoform R [Drosophila melanogaster]
gi|16303586|gb|AAL14775.1| hephaestus [Drosophila melanogaster]
gi|28381533|gb|AAO41627.1| hephaestus, isoform H [Drosophila melanogaster]
gi|157816746|gb|ABV82366.1| LD04329p [Drosophila melanogaster]
gi|272477264|gb|ACZ95080.1| hephaestus, isoform O [Drosophila melanogaster]
gi|272477267|gb|ACZ95083.1| hephaestus, isoform R [Drosophila melanogaster]
Length = 789
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 65/100 (65%), Gaps = 1/100 (1%)
Query: 128 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 187
VL +E++ Y V+LD+LH +F +G V KI F KN QALIQYPD +A AK L+
Sbjct: 405 VLRVIVESLMYPVSLDILHQIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLD 464
Query: 188 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
G IY+ G C L I S+ T L++K NND+SRD+T P+ P
Sbjct: 465 GQNIYN-GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALP 503
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 56/94 (59%), Gaps = 7/94 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+F +G V KI TF K FQAL+Q+ D +A AK+ LDG++I G CTLR
Sbjct: 424 QIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLDGQNIYN-------GCCTLR 476
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID 108
I S T L+VK+ + +SRD+TNP LP +D
Sbjct: 477 IDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVD 510
>gi|365813382|pdb|3ZZY|A Chain A, Crystal Structure Of A Raver1 Pri3 Peptide In Complex With
Polypyrimidine Tract Binding Protein Rrm2
gi|365813383|pdb|3ZZY|B Chain B, Crystal Structure Of A Raver1 Pri3 Peptide In Complex With
Polypyrimidine Tract Binding Protein Rrm2
gi|365813386|pdb|3ZZZ|A Chain A, Crystal Structure Of A Raver1 Pri4 Peptide In Complex With
Polypyrimidine Tract Binding Protein Rrm2
gi|365813387|pdb|3ZZZ|B Chain B, Crystal Structure Of A Raver1 Pri4 Peptide In Complex With
Polypyrimidine Tract Binding Protein Rrm2
Length = 130
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/109 (49%), Positives = 69/109 (63%), Gaps = 1/109 (0%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 19 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 78
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P
Sbjct: 79 AQHAKLSLDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLP 126
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 56/91 (61%), Gaps = 7/91 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 47 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 99
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 105
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 100 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 130
>gi|194740822|ref|XP_001952889.1| GF17502 [Drosophila ananassae]
gi|190625948|gb|EDV41472.1| GF17502 [Drosophila ananassae]
Length = 835
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 77/132 (58%), Gaps = 8/132 (6%)
Query: 103 APSAIDASGQLSVGLDGKKLEPESN-------VLLASIENMQYAVTLDVLHMVFSAFGPV 155
A S+ D +G +++ + SN VL +E++ Y V+LD+LH +F +G V
Sbjct: 381 ANSSGDGNGTVAILQNNTSAGNNSNSAGGPNTVLRVIVESLMYPVSLDILHQIFQRYGKV 440
Query: 156 QKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNN 215
KI F KN QALIQYPD +A AK L+G IY+ G C L I S+ T L++K NN
Sbjct: 441 LKIVTFTKNNSFQALIQYPDANSAQHAKSLLDGQNIYN-GCCTLRIDNSKLTALNVKYNN 499
Query: 216 DRSRDYTLPSTP 227
D+SRD+T P+ P
Sbjct: 500 DKSRDFTNPALP 511
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 56/94 (59%), Gaps = 7/94 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+F +G V KI TF K FQAL+Q+ D +A AK+ LDG++I G CTLR
Sbjct: 432 QIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLDGQNIYN-------GCCTLR 484
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID 108
I S T L+VK+ + +SRD+TNP LP +D
Sbjct: 485 IDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVD 518
>gi|198452628|ref|XP_001358876.2| GA15927, isoform A [Drosophila pseudoobscura pseudoobscura]
gi|198132005|gb|EAL28019.2| GA15927, isoform A [Drosophila pseudoobscura pseudoobscura]
Length = 785
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 65/100 (65%), Gaps = 1/100 (1%)
Query: 128 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 187
VL +E++ Y V+LD+LH +F +G V KI F KN QALIQYPD +A AK L+
Sbjct: 401 VLRVIVESLMYPVSLDILHQIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLD 460
Query: 188 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
G IY+ G C L I S+ T L++K NND+SRD+T P+ P
Sbjct: 461 GQNIYN-GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALP 499
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 56/94 (59%), Gaps = 7/94 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+F +G V KI TF K FQAL+Q+ D +A AK+ LDG++I G CTLR
Sbjct: 420 QIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLDGQNIYN-------GCCTLR 472
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID 108
I S T L+VK+ + +SRD+TNP LP +D
Sbjct: 473 IDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVD 506
>gi|45552115|ref|NP_788776.2| hephaestus, isoform G [Drosophila melanogaster]
gi|45446737|gb|AAO41623.2| hephaestus, isoform G [Drosophila melanogaster]
Length = 615
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 65/100 (65%), Gaps = 1/100 (1%)
Query: 128 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 187
VL +E++ Y V+LD+LH +F +G V KI F KN QALIQYPD +A AK L+
Sbjct: 231 VLRVIVESLMYPVSLDILHQIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLD 290
Query: 188 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
G IY+ G C L I S+ T L++K NND+SRD+T P+ P
Sbjct: 291 GQNIYN-GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALP 329
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 56/94 (59%), Gaps = 7/94 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+F +G V KI TF K FQAL+Q+ D +A AK+ LDG++I G CTLR
Sbjct: 250 QIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLDGQNIYN-------GCCTLR 302
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID 108
I S T L+VK+ + +SRD+TNP LP +D
Sbjct: 303 IDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVD 336
>gi|24651780|ref|NP_733460.1| hephaestus, isoform B [Drosophila melanogaster]
gi|28571963|ref|NP_733461.2| hephaestus, isoform A [Drosophila melanogaster]
gi|28571967|ref|NP_788773.1| hephaestus, isoform D [Drosophila melanogaster]
gi|28571969|ref|NP_788774.1| hephaestus, isoform E [Drosophila melanogaster]
gi|28571971|ref|NP_788777.1| hephaestus, isoform I [Drosophila melanogaster]
gi|28571973|ref|NP_788778.1| hephaestus, isoform J [Drosophila melanogaster]
gi|28571975|ref|NP_788779.1| hephaestus, isoform K [Drosophila melanogaster]
gi|28571979|ref|NP_788775.1| hephaestus, isoform F [Drosophila melanogaster]
gi|161079548|ref|NP_001097994.1| hephaestus, isoform N [Drosophila melanogaster]
gi|281362948|ref|NP_001163788.1| hephaestus, isoform P [Drosophila melanogaster]
gi|281362960|ref|NP_001163794.1| hephaestus, isoform V [Drosophila melanogaster]
gi|18042167|gb|AAL57860.1|AF455053_1 hephaestus [Drosophila melanogaster]
gi|23172813|gb|AAF57208.2| hephaestus, isoform B [Drosophila melanogaster]
gi|28381525|gb|AAN14297.2| hephaestus, isoform A [Drosophila melanogaster]
gi|28381526|gb|AAO41620.1| hephaestus, isoform D [Drosophila melanogaster]
gi|28381527|gb|AAO41621.1| hephaestus, isoform E [Drosophila melanogaster]
gi|28381528|gb|AAO41622.1| hephaestus, isoform F [Drosophila melanogaster]
gi|28381530|gb|AAO41624.1| hephaestus, isoform I [Drosophila melanogaster]
gi|28381531|gb|AAO41625.1| hephaestus, isoform J [Drosophila melanogaster]
gi|28381532|gb|AAO41626.1| hephaestus, isoform K [Drosophila melanogaster]
gi|158030462|gb|ABW08818.1| hephaestus, isoform N [Drosophila melanogaster]
gi|189182140|gb|ACD81846.1| LD11808p [Drosophila melanogaster]
gi|272477265|gb|ACZ95081.1| hephaestus, isoform P [Drosophila melanogaster]
gi|272477271|gb|ACZ95087.1| hephaestus, isoform V [Drosophila melanogaster]
Length = 608
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 65/100 (65%), Gaps = 1/100 (1%)
Query: 128 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 187
VL +E++ Y V+LD+LH +F +G V KI F KN QALIQYPD +A AK L+
Sbjct: 224 VLRVIVESLMYPVSLDILHQIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLD 283
Query: 188 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
G IY+ G C L I S+ T L++K NND+SRD+T P+ P
Sbjct: 284 GQNIYN-GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALP 322
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 56/94 (59%), Gaps = 7/94 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+F +G V KI TF K FQAL+Q+ D +A AK+ LDG++I G CTLR
Sbjct: 243 QIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLDGQNIYN-------GCCTLR 295
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID 108
I S T L+VK+ + +SRD+TNP LP +D
Sbjct: 296 IDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVD 329
>gi|17864284|ref|NP_524703.1| hephaestus, isoform C [Drosophila melanogaster]
gi|281362954|ref|NP_001163791.1| hephaestus, isoform S [Drosophila melanogaster]
gi|281362956|ref|NP_001163792.1| hephaestus, isoform T [Drosophila melanogaster]
gi|281362958|ref|NP_001163793.1| hephaestus, isoform U [Drosophila melanogaster]
gi|6665714|gb|AAF22979.1|AF211191_1 polypyrimidine tract binding protein [Drosophila melanogaster]
gi|23172814|gb|AAN14296.1| hephaestus, isoform C [Drosophila melanogaster]
gi|272477268|gb|ACZ95084.1| hephaestus, isoform S [Drosophila melanogaster]
gi|272477269|gb|ACZ95085.1| hephaestus, isoform T [Drosophila melanogaster]
gi|272477270|gb|ACZ95086.1| hephaestus, isoform U [Drosophila melanogaster]
Length = 581
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 65/100 (65%), Gaps = 1/100 (1%)
Query: 128 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 187
VL +E++ Y V+LD+LH +F +G V KI F KN QALIQYPD +A AK L+
Sbjct: 197 VLRVIVESLMYPVSLDILHQIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLD 256
Query: 188 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
G IY+ G C L I S+ T L++K NND+SRD+T P+ P
Sbjct: 257 GQNIYN-GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALP 295
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 56/94 (59%), Gaps = 7/94 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+F +G V KI TF K FQAL+Q+ D +A AK+ LDG++I G CTLR
Sbjct: 216 QIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLDGQNIYN-------GCCTLR 268
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID 108
I S T L+VK+ + +SRD+TNP LP +D
Sbjct: 269 IDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVD 302
>gi|33414511|ref|NP_877970.1| polypyrimidine tract-binding protein [Rattus norvegicus]
gi|29824910|gb|AAO92353.1| SMPTB [Rattus norvegicus]
gi|149028489|gb|EDL83874.1| polypyrimidine tract-binding protein [Rattus norvegicus]
Length = 588
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/110 (50%), Positives = 68/110 (61%), Gaps = 1/110 (0%)
Query: 125 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 184
+S VL +EN Y VTL+VLH +FS FG V KI KN QAL+QY V +A AK
Sbjct: 186 QSPVLRILVENYFYRVTLEVLHQIFSRFGTVLKIITCTKNNRFQALLQYAHVMSAERAKL 245
Query: 185 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPS 234
L+G IYD C L IS+S T+L +K NND+SRDY P P +SQPS
Sbjct: 246 FLDGQNIYDAC-CTLRISFSGLTNLMVKYNNDKSRDYMRPDLPSDDSQPS 294
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 52/87 (59%), Gaps = 7/87 (8%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI T K FQAL+Q++ +A AK LDG++I CTLR
Sbjct: 208 QIFSRFGTVLKIITCTKNNRFQALLQYAHVMSAERAKLFLDGQNIYD-------ACCTLR 260
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLP 101
I++S T+L VK+ + +SRDY P LP
Sbjct: 261 ISFSGLTNLMVKYNNDKSRDYMRPDLP 287
>gi|161079544|ref|NP_001097993.1| hephaestus, isoform M [Drosophila melanogaster]
gi|16589094|gb|AAL27010.1|AF436844_1 hephaestus [Drosophila melanogaster]
gi|158030461|gb|ABW08817.1| hephaestus, isoform M [Drosophila melanogaster]
Length = 568
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 65/100 (65%), Gaps = 1/100 (1%)
Query: 128 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 187
VL +E++ Y V+LD+LH +F +G V KI F KN QALIQYPD +A AK L+
Sbjct: 184 VLRVIVESLMYPVSLDILHQIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLD 243
Query: 188 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
G IY+ G C L I S+ T L++K NND+SRD+T P+ P
Sbjct: 244 GQNIYN-GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALP 282
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 56/94 (59%), Gaps = 7/94 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+F +G V KI TF K FQAL+Q+ D +A AK+ LDG++I G CTLR
Sbjct: 203 QIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLDGQNIYN-------GCCTLR 255
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID 108
I S T L+VK+ + +SRD+TNP LP +D
Sbjct: 256 IDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVD 289
>gi|327263703|ref|XP_003216657.1| PREDICTED: regulator of differentiation 1-like [Anolis
carolinensis]
Length = 558
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 92/164 (56%), Gaps = 7/164 (4%)
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVG---LDGKKLEPESNVLLA 131
I YS H +L +++R T L A SA+ + G G +G +S+VL
Sbjct: 134 IQYSNHRELKTDNLPNQAR--TQAALQ-AVSAVQSGGLALTGAPATEGGLPPGQSSVLRI 190
Query: 132 SIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCI 191
+EN+ Y VTL+VL+ +FS FG V KI F KN QAL+QY D A A+ AL+G I
Sbjct: 191 IVENLFYPVTLEVLYQIFSKFGTVLKIITFTKNNQFQALLQYADPLNAHYARMALDGQNI 250
Query: 192 YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
Y+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 251 YN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPSGDGQPSL 293
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 123/274 (44%), Gaps = 75/274 (27%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
L+V++ Q+FS FG V KI TF K FQAL+Q++D A A+ ALDG++I
Sbjct: 201 LEVLY--QIFSKFGTVLKIITFTKNNQFQALLQYADPLNAHYARMALDGQNIYN------ 252
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLP-------------------------- 101
CTLRI +S T L+VK+ + +SRD+T LP
Sbjct: 253 -ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPSGDGQPSLEPTMAAAFGTPGIISSPY 311
Query: 102 --------------------------VAPSAIDAS---GQLSV-GLDGKKLEPESNVLLA 131
+ P AI S G++++ G+ G P ++VLL
Sbjct: 312 AGAAGFAPAIGFPQAAGLSVQGVPSALGPLAITTSTMTGRMAIPGVHGM---PGNSVLLV 368
Query: 132 SIENMQYAVTLDVLHMVFSAFGPVQKIA-MFDKNGGLQALIQYPDVQTAVVAKEALEGHC 190
S N A+T D L ++F +G V ++ MF+K AL+Q D A +A L G
Sbjct: 369 SNLNPD-AITPDGLFILFGVYGDVHRVKIMFNKKE--NALVQMADATQAQLAMNHLNGQK 425
Query: 191 IYDGGFCKLHISYSRHTDLSIKVNNDR--SRDYT 222
+Y G ++ +S + L + D+ ++DY+
Sbjct: 426 LY-GKMLRVTLSKHQTVQLPREGQEDQGLTKDYS 458
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 83/198 (41%), Gaps = 22/198 (11%)
Query: 11 IFILQVFSAFGFVHKITT-FEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMG 69
+FIL F +G VH++ F K ALVQ +D A A N L+G+ + +L
Sbjct: 381 LFIL--FGVYGDVHRVKIMFNKKE--NALVQMADATQAQLAMNHLNGQKLYGKML----- 431
Query: 70 PCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVL 129
R+T S H + + + + T Y G + + + P S L
Sbjct: 432 ----RVTLSKHQTVQLPREGQEDQGLTKDYSNSPLHRFKKPGSKNF----QNIFPPSATL 483
Query: 130 LASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGH 189
+ N+ +VT+D L +F+ G + K F ALIQ V+ A+ A L H
Sbjct: 484 --HLSNIPPSVTVDDLKNLFADTGCIVKAFKFFPKDRKMALIQLGSVEEAIQALIELHNH 541
Query: 190 CIYDGGFCKLHISYSRHT 207
+ G L +S+S+ T
Sbjct: 542 DL--GENHHLRVSFSKST 557
>gi|17861972|gb|AAL39463.1| LD03185p [Drosophila melanogaster]
Length = 571
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 65/100 (65%), Gaps = 1/100 (1%)
Query: 128 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 187
VL +E++ Y V+LD+LH +F +G V KI F KN QALIQYPD +A AK L+
Sbjct: 224 VLRVIVESLMYPVSLDILHQIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLD 283
Query: 188 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
G IY+ G C L I S+ T L++K NND+SRD+T P+ P
Sbjct: 284 GQNIYN-GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALP 322
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 56/94 (59%), Gaps = 7/94 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+F +G V KI TF K FQAL+Q+ D +A AK+ LDG++I G CTLR
Sbjct: 243 QIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLDGQNIYN-------GCCTLR 295
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID 108
I S T L+VK+ + +SRD+TNP LP +D
Sbjct: 296 IDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVD 329
>gi|390178277|ref|XP_003736615.1| GA15927, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388859388|gb|EIM52688.1| GA15927, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 572
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 65/100 (65%), Gaps = 1/100 (1%)
Query: 128 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 187
VL +E++ Y V+LD+LH +F +G V KI F KN QALIQYPD +A AK L+
Sbjct: 188 VLRVIVESLMYPVSLDILHQIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLD 247
Query: 188 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
G IY+ G C L I S+ T L++K NND+SRD+T P+ P
Sbjct: 248 GQNIYN-GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALP 286
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 56/94 (59%), Gaps = 7/94 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+F +G V KI TF K FQAL+Q+ D +A AK+ LDG++I G CTLR
Sbjct: 207 QIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLDGQNIYN-------GCCTLR 259
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID 108
I S T L+VK+ + +SRD+TNP LP +D
Sbjct: 260 IDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVD 293
>gi|161079541|ref|NP_001097992.1| hephaestus, isoform L [Drosophila melanogaster]
gi|158030460|gb|ABW08816.1| hephaestus, isoform L [Drosophila melanogaster]
Length = 622
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 65/100 (65%), Gaps = 1/100 (1%)
Query: 128 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 187
VL +E++ Y V+LD+LH +F +G V KI F KN QALIQYPD +A AK L+
Sbjct: 238 VLRVIVESLMYPVSLDILHQIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLD 297
Query: 188 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
G IY+ G C L I S+ T L++K NND+SRD+T P+ P
Sbjct: 298 GQNIYN-GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALP 336
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 56/94 (59%), Gaps = 7/94 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+F +G V KI TF K FQAL+Q+ D +A AK+ LDG++I G CTLR
Sbjct: 257 QIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLDGQNIYN-------GCCTLR 309
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID 108
I S T L+VK+ + +SRD+TNP LP +D
Sbjct: 310 IDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVD 343
>gi|25146814|ref|NP_741042.1| Protein PTB-1, isoform b [Caenorhabditis elegans]
gi|20338919|emb|CAD30435.1| Protein PTB-1, isoform b [Caenorhabditis elegans]
Length = 453
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/119 (43%), Positives = 77/119 (64%), Gaps = 2/119 (1%)
Query: 109 ASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQ 168
A+G +S G + +P S VL IENM + V+LDVL+ +F+ +G V +I F+KN Q
Sbjct: 51 ANGSVSNFEVGTQQQPNS-VLRTIIENMMFPVSLDVLYQLFTRYGKVLRIITFNKNNTFQ 109
Query: 169 ALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
AL+Q + +A +AK+ LE +Y+G C L I YS+ + L++K NND+SRDYT P+ P
Sbjct: 110 ALVQMSEANSAQLAKQGLENQNVYNGC-CTLRIDYSKLSTLNVKYNNDKSRDYTNPNLP 167
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 61/103 (59%), Gaps = 7/103 (6%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCT 72
+ Q+F+ +G V +I TF K FQALVQ S+ +A AK L+ +++ G CT
Sbjct: 86 LYQLFTRYGKVLRIITFNKNNTFQALVQMSEANSAQLAKQGLENQNVYN-------GCCT 138
Query: 73 LRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSV 115
LRI YS + L+VK+ + +SRDYTNP LP ++ + +S+
Sbjct: 139 LRIDYSKLSTLNVKYNNDKSRDYTNPNLPAGEMTLEQTIAMSI 181
>gi|50261257|gb|AAT72299.1| polypyrimidine tract binding protein [Drosophila melanogaster]
Length = 493
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 65/100 (65%), Gaps = 1/100 (1%)
Query: 128 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 187
VL +E++ Y V+LD+LH +F +G V KI F KN QALIQYPD +A AK L+
Sbjct: 109 VLRVIVESLMYPVSLDILHQIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLD 168
Query: 188 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
G IY+ G C L I S+ T L++K NND+SRD+T P+ P
Sbjct: 169 GQNIYN-GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALP 207
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 56/94 (59%), Gaps = 7/94 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+F +G V KI TF K FQAL+Q+ D +A AK+ LDG++I G CTLR
Sbjct: 128 QIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLDGQNIYN-------GCCTLR 180
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID 108
I S T L+VK+ + +SRD+TNP LP +D
Sbjct: 181 IDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVD 214
>gi|281362950|ref|NP_001163789.1| hephaestus, isoform Q [Drosophila melanogaster]
gi|272477266|gb|ACZ95082.1| hephaestus, isoform Q [Drosophila melanogaster]
Length = 493
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 65/100 (65%), Gaps = 1/100 (1%)
Query: 128 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 187
VL +E++ Y V+LD+LH +F +G V KI F KN QALIQYPD +A AK L+
Sbjct: 109 VLRVIVESLMYPVSLDILHQIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLD 168
Query: 188 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
G IY+ G C L I S+ T L++K NND+SRD+T P+ P
Sbjct: 169 GQNIYN-GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALP 207
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 56/94 (59%), Gaps = 7/94 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+F +G V KI TF K FQAL+Q+ D +A AK+ LDG++I G CTLR
Sbjct: 128 QIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLDGQNIYN-------GCCTLR 180
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID 108
I S T L+VK+ + +SRD+TNP LP +D
Sbjct: 181 IDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVD 214
>gi|148701925|gb|EDL33872.1| mCG9934 [Mus musculus]
Length = 559
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/110 (49%), Positives = 66/110 (60%), Gaps = 1/110 (0%)
Query: 125 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 184
+ VL ++N Y VTL+VLH +FS FG V KI + KN QAL+QY +A AK
Sbjct: 152 QGTVLRILVDNFFYRVTLEVLHQLFSRFGTVLKIITYTKNNRFQALLQYAHSMSAKCAKL 211
Query: 185 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPS 234
L+G IYD C L IS+S T+L +K NND SRDYT P P SQPS
Sbjct: 212 CLDGQNIYDAC-CTLRISFSGLTNLIVKYNNDESRDYTRPDLPSDESQPS 260
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 54/87 (62%), Gaps = 7/87 (8%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI T+ K FQAL+Q++ + +A AK LDG++I CTLR
Sbjct: 174 QLFSRFGTVLKIITYTKNNRFQALLQYAHSMSAKCAKLCLDGQNIYD-------ACCTLR 226
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLP 101
I++S T+L VK+ + SRDYT P LP
Sbjct: 227 ISFSGLTNLIVKYNNDESRDYTRPDLP 253
Score = 37.7 bits (86), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 8/87 (9%)
Query: 140 VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKL 199
VT L ++F A+G VQ++ + N AL+Q D A +A + L GH +Y C L
Sbjct: 377 VTPQSLFILFGAYGDVQRVKILF-NRKENALVQMADGSQAELALKHLNGHKLYGKALCIL 435
Query: 200 HISYSRHTDLSI----KVNNDRSRDYT 222
S+H + + K + D +++Y
Sbjct: 436 P---SKHQSVKLPREGKEDQDLTKEYV 459
>gi|195446082|ref|XP_002070619.1| GK10936 [Drosophila willistoni]
gi|194166704|gb|EDW81605.1| GK10936 [Drosophila willistoni]
Length = 629
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 65/100 (65%), Gaps = 1/100 (1%)
Query: 128 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 187
VL +E++ Y V+LD+LH +F +G V KI F KN QALIQYPD +A AK L+
Sbjct: 194 VLRVIVESLMYPVSLDILHQIFQRYGKVLKIVTFTKNNSFQALIQYPDAHSAQHAKSLLD 253
Query: 188 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
G IY+ G C L I S+ T L++K NND+SRD+T P+ P
Sbjct: 254 GQNIYN-GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALP 292
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 56/94 (59%), Gaps = 7/94 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+F +G V KI TF K FQAL+Q+ D +A AK+ LDG++I G CTLR
Sbjct: 213 QIFQRYGKVLKIVTFTKNNSFQALIQYPDAHSAQHAKSLLDGQNIYN-------GCCTLR 265
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID 108
I S T L+VK+ + +SRD+TNP LP +D
Sbjct: 266 IDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVD 299
>gi|357497749|ref|XP_003619163.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
gi|355494178|gb|AES75381.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
Length = 318
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 72/109 (66%), Gaps = 2/109 (1%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G++ EP + +LL ++ + Y +T+DVL VFS G V+KI F K+ G QALIQY Q+
Sbjct: 55 GREDEP-NRILLVTVHQVLYPMTVDVLQQVFSPHGFVEKIVTFQKSAGFQALIQYETRQS 113
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
AV A+ AL+G +YD G C+L I +S +L + NNDRSRD+T P+ P
Sbjct: 114 AVTARGALQGRNVYD-GCCQLDIQFSNLDELQVNYNNDRSRDFTNPNLP 161
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 59/94 (62%), Gaps = 7/94 (7%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + QVFS GFV KI TF+K+AGFQAL+Q+ ++A +A+ AL GR++
Sbjct: 75 MTVDVLQQVFSPHGFVEKIVTFQKSAGFQALIQYETRQSAVTARGALQGRNVYD------ 128
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLP 101
G C L I +S +L V + + RSRD+TNP LP
Sbjct: 129 -GCCQLDIQFSNLDELQVNYNNDRSRDFTNPNLP 161
>gi|427796833|gb|JAA63868.1| Putative hephaestus, partial [Rhipicephalus pulchellus]
Length = 554
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 78/143 (54%), Gaps = 14/143 (9%)
Query: 85 VKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDV 144
V+F +HR N + +A + G + VL ++N Y VTLD+
Sbjct: 155 VQFSNHRELKTDNVHGALANQGGEGGG-------------ANTVLRVVVDNQIYPVTLDL 201
Query: 145 LHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYS 204
LH +FS G V KI F K+ QALIQ+ DV A AK AL+G IY+ C L I YS
Sbjct: 202 LHSIFSRAGKVLKIVTFTKSNSFQALIQFSDVMGAQAAKLALDGQSIYN-ACCTLRIEYS 260
Query: 205 RHTDLSIKVNNDRSRDYTLPSTP 227
+ T+L++K NND+SRD+T P+ P
Sbjct: 261 KLTNLNVKYNNDKSRDFTNPTLP 283
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 106/244 (43%), Gaps = 71/244 (29%)
Query: 3 LTLSLLKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRY 62
+TL LL IF S G V KI TF K+ FQAL+QFSD A +AK ALDG+SI
Sbjct: 197 VTLDLLHSIF-----SRAGKVLKIVTFTKSNSFQALIQFSDVMGAQAAKLALDGQSIYN- 250
Query: 63 LLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPV-------------------- 102
CTLRI YS T+L+VK+ + +SRD+TNP LP
Sbjct: 251 ------ACCTLRIEYSKLTNLNVKYNNDKSRDFTNPTLPTGDPTLDIGLAGSLGILASPF 304
Query: 103 ---------------------------------APSAIDASGQLSVGLDGKKLEPESNVL 129
APSA A G + L G+ S VL
Sbjct: 305 AAAGPGLTSPLTAAYAASATAGLPLGGFALSPSAPSAATALGMAGIRLPGQ--ATTSCVL 362
Query: 130 LASIENMQYAVTLDVLHMVFSAFGPVQKIA-MFDKNGGLQALIQYPDVQTAVVAKEALEG 188
L S N Q VT D L +F +G V ++ +F+K ALIQ + Q A +A L+
Sbjct: 363 LVSNLNEQM-VTPDALFTLFGVYGDVIRVKILFNKKD--SALIQMAEPQQAQLAMSHLDK 419
Query: 189 HCIY 192
+Y
Sbjct: 420 IKVY 423
>gi|302782650|ref|XP_002973098.1| hypothetical protein SELMODRAFT_173175 [Selaginella moellendorffii]
gi|302790002|ref|XP_002976769.1| hypothetical protein SELMODRAFT_105564 [Selaginella moellendorffii]
gi|300155807|gb|EFJ22438.1| hypothetical protein SELMODRAFT_105564 [Selaginella moellendorffii]
gi|300158851|gb|EFJ25472.1| hypothetical protein SELMODRAFT_173175 [Selaginella moellendorffii]
Length = 436
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 106/222 (47%), Gaps = 46/222 (20%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKN-------ALDGRSIPRYLLP 65
+L + FG V K+ QAL+Q D A SA ++ GR++
Sbjct: 22 LLGLVQPFGSVSKMVLLRTKN--QALLQMQDVNAAISAMQYYTSVQPSVRGRNV------ 73
Query: 66 ENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPE 125
I +S+H +L+ Q+ T P P G + +
Sbjct: 74 --------YIQFSSHQELTTSDQA------TQPRRPA----------------GDQDQQP 103
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ +LL +I + Y +T+DVLH VF+ G V+KI F K+ GLQALIQY + Q+AV AK
Sbjct: 104 NRILLVTIHHPLYPITVDVLHQVFNPHGHVEKIVTFQKSAGLQALIQYNNQQSAVYAKSL 163
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
L+G IYDG C L I +S +L + NN+R+RDYT S P
Sbjct: 164 LQGRNIYDGC-CTLDIQFSNLQELQVNFNNERTRDYTNSSLP 204
>gi|443711043|gb|ELU04990.1| hypothetical protein CAPTEDRAFT_200421 [Capitella teleta]
Length = 524
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 56/119 (47%), Positives = 72/119 (60%), Gaps = 5/119 (4%)
Query: 128 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 187
VL +ENM Y VT+DVL +FS +G V KI F KN QALIQ+ D A AK +L
Sbjct: 139 VLRVIVENMLYPVTIDVLKSIFSRYGQVLKIVTFSKNNTFQALIQFSDQIAAQTAKVSLH 198
Query: 188 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGA 246
G IY+ G C L I +S+ L++K NND+SRDYT P+ P + QP++ PV GA
Sbjct: 199 GQNIYN-GCCTLRIDFSKLQALNVKYNNDKSRDYTNPNLPSGDGQPAM----PVDAQGA 252
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/215 (35%), Positives = 101/215 (46%), Gaps = 53/215 (24%)
Query: 3 LTLSLLKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRY 62
+T+ +LK IF S +G V KI TF K FQAL+QFSD A +AK +L G++I
Sbjct: 151 VTIDVLKSIF-----SRYGQVLKIVTFSKNNTFQALIQFSDQIAAQTAKVSLHGQNIYN- 204
Query: 63 LLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSA----IDASGQLSVGLD 118
G CTLRI +S L+VK+ + +SRDYTNP LP +DA G S+GL
Sbjct: 205 ------GCCTLRIDFSKLQALNVKYNNDKSRDYTNPNLPSGDGQPAMPVDAQGAGSMGLS 258
Query: 119 GKKL--------------------------------EPESN-VLLASIENMQYAVTLDVL 145
L +P++ VLL S N Q VT D L
Sbjct: 259 AAGLGAFQAAVPFSLAGLNAAAGLNAMNAAGLRLPGQPQTGAVLLVSNLNEQ-KVTPDAL 317
Query: 146 HMVFSAFGPVQKIA-MFDKNGGLQALIQYPDVQTA 179
+F +G V ++ MF+K ALIQ+ D A
Sbjct: 318 FTLFGVYGDVIRVKIMFNKKDN--ALIQFADAAQA 350
>gi|391330010|ref|XP_003739458.1| PREDICTED: polypyrimidine tract-binding protein 3-like [Metaseiulus
occidentalis]
Length = 588
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 56/119 (47%), Positives = 73/119 (61%), Gaps = 4/119 (3%)
Query: 109 ASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQ 168
SG++S +G+ L + VL IEN Y +TLDVL+ +FS G V KI F+KN LQ
Sbjct: 214 GSGEISPTHNGQTL---NTVLRVIIENQLYPITLDVLNSLFSRIGKVLKIVTFNKNNTLQ 270
Query: 169 ALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
AL+QY D A AK L+G IY+ C L I YS+ L++K NND+SRD+T PS P
Sbjct: 271 ALVQYGDALAAQAAKMTLDGQHIYN-SCCTLRIEYSKLQQLNVKYNNDKSRDFTNPSLP 328
>gi|427789193|gb|JAA60048.1| Putative hephaestus [Rhipicephalus pulchellus]
Length = 559
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 78/143 (54%), Gaps = 14/143 (9%)
Query: 85 VKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDV 144
V+F +HR N + +A + G + VL ++N Y VTLD+
Sbjct: 160 VQFSNHRELKTDNVHGALANQGGEGGG-------------ANTVLRVVVDNQIYPVTLDL 206
Query: 145 LHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYS 204
LH +FS G V KI F K+ QALIQ+ DV A AK AL+G IY+ C L I YS
Sbjct: 207 LHSIFSRAGKVLKIVTFTKSNSFQALIQFSDVMGAQAAKLALDGQSIYN-ACCTLRIEYS 265
Query: 205 RHTDLSIKVNNDRSRDYTLPSTP 227
+ T+L++K NND+SRD+T P+ P
Sbjct: 266 KLTNLNVKYNNDKSRDFTNPTLP 288
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 106/244 (43%), Gaps = 71/244 (29%)
Query: 3 LTLSLLKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRY 62
+TL LL IF S G V KI TF K+ FQAL+QFSD A +AK ALDG+SI
Sbjct: 202 VTLDLLHSIF-----SRAGKVLKIVTFTKSNSFQALIQFSDVMGAQAAKLALDGQSIYN- 255
Query: 63 LLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPV-------------------- 102
CTLRI YS T+L+VK+ + +SRD+TNP LP
Sbjct: 256 ------ACCTLRIEYSKLTNLNVKYNNDKSRDFTNPTLPTGDPTLDIGLAGSLGILASPF 309
Query: 103 ---------------------------------APSAIDASGQLSVGLDGKKLEPESNVL 129
APSA A G + L G+ S VL
Sbjct: 310 AAAGPGLTSPLTAAYAASATAGLPLGGFALSPSAPSAATALGMAGIRLPGQ--ATTSCVL 367
Query: 130 LASIENMQYAVTLDVLHMVFSAFGPVQKIA-MFDKNGGLQALIQYPDVQTAVVAKEALEG 188
L S N Q VT D L +F +G V ++ +F+K ALIQ + Q A +A L+
Sbjct: 368 LVSNLNEQM-VTPDALFTLFGVYGDVIRVKILFNKKD--SALIQMAEPQQAQLAMSHLDK 424
Query: 189 HCIY 192
+Y
Sbjct: 425 IKVY 428
>gi|157838029|ref|NP_001093477.1| polypyrimidine tract-binding protein 2 [Danio rerio]
Length = 538
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 66/106 (62%), Gaps = 1/106 (0%)
Query: 128 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 187
VL I+NM Y VTLDVL +FS FG V KI F KN QAL+Q+ D A AK +L+
Sbjct: 174 VLRIIIDNMFYPVTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFSDPVNAQQAKLSLD 233
Query: 188 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQP 233
G IY+ C L I +S+ +L++K NND+SRDYT P P + QP
Sbjct: 234 GQNIYN-SCCTLRIDFSKLVNLNVKYNNDKSRDYTRPELPAGDGQP 278
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 117/275 (42%), Gaps = 66/275 (24%)
Query: 3 LTLSLLKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRY 62
+TL +L+ Q+FS FG V KI TF K FQAL+QFSD A AK +LDG++I
Sbjct: 186 VTLDVLQ-----QIFSKFGTVMKIITFTKNNQFQALLQFSDPVNAQQAKLSLDGQNIYNS 240
Query: 63 LLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVA------------------- 103
CTLRI +S +L+VK+ + +SRDYT P LP
Sbjct: 241 C-------CTLRIDFSKLVNLNVKYNNDKSRDYTRPELPAGDGQPPVDPSMAAALSKDSP 293
Query: 104 -------------------PSAIDASGQLS-----------VGLDGKKLEPESNVLLASI 133
PS++ A LS V L G + VLL S
Sbjct: 294 SLLGTPSGMVTSYSSGGGFPSSLGAISPLSAAAAAAAAAGRVALSGHSV--PGGVLLVSN 351
Query: 134 ENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYD 193
N + VT L +F +G VQ++ + N ALIQ D A +A L G +Y
Sbjct: 352 LNDEM-VTPQSLFTLFGVYGDVQRVKIL-YNKKDSALIQMSDGNQAQLAMSHLNGQKMY- 408
Query: 194 GGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 228
G ++ +S + L + +D+ S+P+
Sbjct: 409 GKIIRVTLSKHQTVQLPREGLDDQGLTKDFTSSPL 443
>gi|395514526|ref|XP_003761466.1| PREDICTED: polypyrimidine tract-binding protein 3 [Sarcophilus
harrisii]
Length = 505
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 79/130 (60%), Gaps = 5/130 (3%)
Query: 110 SGQLSV----GLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNG 165
SG L++ G +G L +S VL +EN+ Y V+L+VL+ +FS FG V +I F KN
Sbjct: 138 SGSLALPAAQGNEGGVLPGQSPVLRIIVENLFYPVSLEVLYQIFSKFGTVLRIITFTKNN 197
Query: 166 GLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 225
QAL+QY D A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T
Sbjct: 198 QFQALLQYADPLNAHYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLD 256
Query: 226 TPMVNSQPSI 235
P + QPSI
Sbjct: 257 LPSGDGQPSI 266
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 103/213 (48%), Gaps = 40/213 (18%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
L+V++ Q+FS FG V +I TF K FQAL+Q++D A AK ALDG++I
Sbjct: 174 LEVLY--QIFSKFGTVLRIITFTKNNQFQALLQYADPLNAHYAKMALDGQNIYN------ 225
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS--AIDASGQLSVGLD------- 118
CTLRI +S T L+VK+ + +SRD+T LP +ID + + GL
Sbjct: 226 -ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPSGDGQPSIDPTMAAAFGLSVPAVPGA 284
Query: 119 ------------------GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA- 159
G P ++VLL S N A+T L ++F +G VQ++
Sbjct: 285 LGPLTITTSAVTGRMAIPGVPGVPGNSVLLVSNLNPD-AITPHGLFILFGVYGDVQRVKI 343
Query: 160 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 192
MF+K AL+Q D A +A L G +Y
Sbjct: 344 MFNKKE--NALVQMADANQAQLAINHLSGQRLY 374
>gi|410904361|ref|XP_003965660.1| PREDICTED: polypyrimidine tract-binding protein 3-like [Takifugu
rubripes]
Length = 481
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 108/216 (50%), Gaps = 30/216 (13%)
Query: 20 FGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR----- 74
FG V K+ T + A Q ++ + E A + N P T+R
Sbjct: 50 FGRVSKLITLK--AKNQGFLEMASEEAAVTMMNYYTS------------APPTIRNQPVF 95
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPY--LPVAPSAIDASGQLSVGLDGKKL-EPESNVLLA 131
I YS H +L ++ + TN L +A SG ++ G DG+ + +S VL
Sbjct: 96 IQYSNHREL-------KTDNLTNQRAALQAISTAAMHSGTMAPGSDGRGVVHGQSPVLRI 148
Query: 132 SIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCI 191
+EN+ Y VTL+VL +FS FG V KI F +N QAL+Q+ D A AK +L+G I
Sbjct: 149 IVENLFYPVTLEVLQQIFSKFGSVLKIITFTRNNQFQALLQFSDAVHAQHAKASLDGQNI 208
Query: 192 YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
Y+G C L I +S+ + L++K NND+SRD+T P
Sbjct: 209 YNGC-CTLRIDFSKLSALNVKYNNDKSRDFTRSDLP 243
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 104/205 (50%), Gaps = 28/205 (13%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF + FQAL+QFSD A AK +LDG++I G CTLR
Sbjct: 164 QIFSKFGSVLKIITFTRNNQFQALLQFSDAVHAQHAKASLDGQNIYN-------GCCTLR 216
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLD-----GKKLEPES--- 126
I +S + L+VK+ + +SRD+T LP A+ LS GL G + P
Sbjct: 217 IDFSKLSALNVKYNNDKSRDFTRSDLPTGELDPTAAFTLSPGLSVAAVPGSLMSPPRVSL 276
Query: 127 --------NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA-MFDKNGGLQALIQYPDVQ 177
+VLL S N + +V+ L ++F +G VQ++ +F+K AL+Q D
Sbjct: 277 QMAPPAIHSVLLVSNLNPE-SVSPQCLFILFGVYGDVQRVKILFNKKEN--ALVQMSDAT 333
Query: 178 TAVVAKEALEGHCIYDGGFCKLHIS 202
A +A L G ++ G ++ +S
Sbjct: 334 QAQLAMSHLNGQRLH-GNVIRVMLS 357
>gi|354498135|ref|XP_003511171.1| PREDICTED: polypyrimidine tract-binding protein 1-like [Cricetulus
griseus]
gi|344255182|gb|EGW11286.1| Polypyrimidine tract-binding protein 1 [Cricetulus griseus]
Length = 575
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 71/115 (61%), Gaps = 1/115 (0%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN Y VTL+VLH +FS FG V KI ++ KN Q L+QY +
Sbjct: 188 GTAVARQSPVLRILVENYFYQVTLEVLHQLFSRFGTVLKIIIYSKNSRFQVLLQYAHPLS 247
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQP 233
A AK L+G IYD C L I++S TDL++K NN++SRDYT P P +SQP
Sbjct: 248 AQRAKLFLDGQNIYD-ACCTLRIAFSGLTDLTVKYNNEKSRDYTRPDLPSGDSQP 301
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 119/277 (42%), Gaps = 75/277 (27%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI + K + FQ L+Q++ +A AK LDG++I CTLR
Sbjct: 216 QLFSRFGTVLKIIIYSKNSRFQVLLQYAHPLSAQRAKLFLDGQNIYD-------ACCTLR 268
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPV----------------APSAIDAS-------- 110
I +S TDL+VK+ + +SRDYT P LP AP I AS
Sbjct: 269 IAFSGLTDLTVKYNNEKSRDYTRPDLPSGDSQPLPAQKMTTAFGAPVVIAASPHASPGVP 328
Query: 111 -----GQLSVGLD----GKKLEP---------------------------ESNVLLASIE 134
Q++ GL K L P + VLL +
Sbjct: 329 HTFAFSQVAAGLAMPEVCKALAPLAVPEVVVAAAAAAAESTVVTSGSPGGANAVLLVANL 388
Query: 135 NMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDG 194
N + VT L ++F A+G VQ++ + N AL+Q D A +A + L GH ++
Sbjct: 389 NPE-KVTPQSLFILFGAYGNVQRVKIL-YNRKENALVQMADGCQAELALKHLNGHKLHGK 446
Query: 195 GFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNS 231
C I S+H LS+K+ + D L + VNS
Sbjct: 447 SLC---IMPSKH--LSVKLPREGKEDQGL-TKDYVNS 477
>gi|334332915|ref|XP_001376108.2| PREDICTED: regulator of differentiation 1 [Monodelphis domestica]
Length = 582
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/130 (43%), Positives = 78/130 (60%), Gaps = 5/130 (3%)
Query: 110 SGQLSV----GLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNG 165
SG L++ G +G L +S VL +EN+ Y VTL+VL+ +FS FG V +I F KN
Sbjct: 189 SGSLALTAAPGSEGGVLPGQSPVLRIIVENLFYPVTLEVLYQIFSKFGTVLRIITFTKNN 248
Query: 166 GLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 225
QAL+QY D A AK L+G IY+ C L I +S+ T L++K NND+SRD+T
Sbjct: 249 QFQALLQYADPLNAHYAKMTLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLD 307
Query: 226 TPMVNSQPSI 235
P + QPS+
Sbjct: 308 LPSGDGQPSL 317
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 57/94 (60%), Gaps = 9/94 (9%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
L+V++ Q+FS FG V +I TF K FQAL+Q++D A AK LDG++I
Sbjct: 225 LEVLY--QIFSKFGTVLRIITFTKNNQFQALLQYADPLNAHYAKMTLDGQNIYNAC---- 278
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLP 101
CTLRI +S T L+VK+ + +SRD+T LP
Sbjct: 279 ---CTLRIDFSKLTSLNVKYNNDKSRDFTRLDLP 309
>gi|345496639|ref|XP_001603240.2| PREDICTED: polypyrimidine tract-binding protein 1-like [Nasonia
vitripennis]
Length = 587
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/152 (38%), Positives = 91/152 (59%), Gaps = 8/152 (5%)
Query: 105 SAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKN 164
+++ A+GQ V + P + VL +E+ Y ++LDVL+ +F+ +G V KI F KN
Sbjct: 176 TSVQAAGQGQVQGSETQGGPNT-VLRVIVEHQIYPISLDVLYQIFTRYGKVLKIVTFTKN 234
Query: 165 GGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP 224
G QALIQY D+ +A AK L+G IY+ C L I YS+ +L++K NND+SRDYT P
Sbjct: 235 GTFQALIQYADMLSAQTAKFNLDGQNIYN-SCCTLRIDYSKMQNLNVKYNNDKSRDYTNP 293
Query: 225 STPM----VNSQPSILGQQPVP--MVGATANQ 250
+ P +++ LG + +P ++GA +Q
Sbjct: 294 TLPTGDANLDAASLALGGELLPQLLLGAAGSQ 325
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 68/110 (61%), Gaps = 10/110 (9%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCT 72
+ Q+F+ +G V KI TF K FQAL+Q++D +A +AK LDG++I CT
Sbjct: 215 LYQIFTRYGKVLKIVTFTKNGTFQALIQYADMLSAQTAKFNLDGQNIYNSC-------CT 267
Query: 73 LRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKL 122
LRI YS +L+VK+ + +SRDYTNP LP + +DA+ S+ L G+ L
Sbjct: 268 LRIDYSKMQNLNVKYNNDKSRDYTNPTLPTGDANLDAA---SLALGGELL 314
>gi|350583628|ref|XP_003125947.3| PREDICTED: polypyrimidine tract-binding protein 2-like [Sus scrofa]
Length = 345
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/100 (51%), Positives = 64/100 (64%), Gaps = 1/100 (1%)
Query: 136 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 195
M Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK AL+G IY+
Sbjct: 1 MYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYNAC 60
Query: 196 FCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 61 -CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 99
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 102/223 (45%), Gaps = 46/223 (20%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 12 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 64
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS-----------GQLS--- 114
I +S +L+VK+ + +SRDYT P LP AI A+ G LS
Sbjct: 65 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGALSPLA 124
Query: 115 ---------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA 159
VG+ G + +L++++ + VT L +F +G VQ++
Sbjct: 125 IPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDVQRVK 182
Query: 160 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 202
+ N ALIQ D + +A L G +Y G ++ +S
Sbjct: 183 IL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLS 223
>gi|156392443|ref|XP_001636058.1| predicted protein [Nematostella vectensis]
gi|156223157|gb|EDO43995.1| predicted protein [Nematostella vectensis]
Length = 470
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 104/206 (50%), Gaps = 16/206 (7%)
Query: 36 QALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAHTDLSVKFQSHR--SR 93
QA ++ E A + N+ Y+ P G + I YS H +L+ H R
Sbjct: 40 QAFLEMKTKENAMALMNSYS------YIPPSIRGR-QIYIQYSNHQELTTNESQHSPGVR 92
Query: 94 DYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFG 153
++ +L ++ + +G+ G+ +L +ENM Y +T++VL+ +F+ +G
Sbjct: 93 GLSSSHLGAGIGSLTSG----LGIAGELPSVNGCILRIIVENMLYPITIEVLNQIFTKYG 148
Query: 154 PVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKV 213
V KI +F +N QAL+Q+ A AK +L+G IY+ G C L I YS+ LS+K
Sbjct: 149 TVLKIVIFTRNNQFQALVQFSQSTEARAAKCSLDGQNIYN-GCCTLRIDYSKLKTLSVKY 207
Query: 214 NNDRSRDYTLPSTPMVNS--QPSILG 237
NND++RDYT P P S PS LG
Sbjct: 208 NNDKTRDYTRPDLPSGESTPDPSALG 233
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 108/228 (47%), Gaps = 43/228 (18%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+F+ +G V KI F + FQALVQFS + A +AK +LDG++I G CTLR
Sbjct: 142 QIFTKYGTVLKIVIFTRNNQFQALVQFSQSTEARAAKCSLDGQNIYN-------GCCTLR 194
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKL-EPESNVL---- 129
I YS LSVK+ + ++RDYT P LP S D S GL L P + +
Sbjct: 195 IDYSKLKTLSVKYNNDKTRDYTRPDLPSGESTPDPSALGFAGLGTSVLGSPAALLGFPGL 254
Query: 130 ------------------------LASIENM-QYAVTLDVLHMVFSAFGPVQKIA-MFDK 163
L + N+ + ++ D L +F +G VQ++ +F+K
Sbjct: 255 GGLPLANLASLANAAPQRMPMGSPLVLVSNLNEEMISCDALFTLFGCYGDVQRVKILFNK 314
Query: 164 NGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 211
AL+Q+ +V A A L G ++ ++ ++ S+HT +S+
Sbjct: 315 KD--TALVQFANVHQAQTAIGHLNGVRVFGK---EMKVTNSKHTSVSL 357
>gi|223647466|gb|ACN10491.1| Polypyrimidine tract-binding protein 2 [Salmo salar]
Length = 540
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 68/108 (62%), Gaps = 1/108 (0%)
Query: 128 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 187
VL I+NM Y VTLDVL +FS FG V KI F KN QAL+Q+ + A A+ +L+
Sbjct: 173 VLRIIIDNMFYPVTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFSEPVNAQQARLSLD 232
Query: 188 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 233 GQNIYN-SCCTLRIDFSKLVNLNVKYNNDKSRDYTRPELPAGDGQPAV 279
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 116/272 (42%), Gaps = 67/272 (24%)
Query: 3 LTLSLLKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRY 62
+TL +L+ Q+FS FG V KI TF K FQAL+QFS+ A A+ +LDG++I
Sbjct: 185 VTLDVLQ-----QIFSKFGTVMKIITFTKNNQFQALLQFSEPVNAQQARLSLDGQNIYN- 238
Query: 63 LLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPV-------------------- 102
CTLRI +S +L+VK+ + +SRDYT P LP
Sbjct: 239 ------SCCTLRIDFSKLVNLNVKYNNDKSRDYTRPELPAGDGQPAVDPAMAAAYNKDSS 292
Query: 103 ---------APSAIDASGQLSVGLDGKKLEPE---------------------SNVLLAS 132
AP + Q S+ G + P S VLL S
Sbjct: 293 LLGTPSGMGAPYSNGGGFQSSLSQGGGAINPMSAAAAAAAAAGRMALSGHSGCSGVLLVS 352
Query: 133 IENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 192
N + VT L +F +G Q++ + N ALIQ D A +A L G +Y
Sbjct: 353 NLN-EEMVTPQSLFTLFGVYGDAQRVKIL-YNKKDSALIQMSDGNQAQLAMSHLNGQKMY 410
Query: 193 DGGFCKLHISYSRHTDLSIKVNNDR--SRDYT 222
G ++ +S + L + +D+ ++D+T
Sbjct: 411 -GKIIRVTLSKHQAVQLPREGLDDQGLTKDFT 441
>gi|168012956|ref|XP_001759167.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689480|gb|EDQ75851.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 410
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/126 (44%), Positives = 76/126 (60%), Gaps = 2/126 (1%)
Query: 108 DASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGL 167
D SGQ ++L P + +LL +I N Y +T+DVLH VFS G V+KI F K+ GL
Sbjct: 64 DQSGQTRRLPAEQELLP-NRILLITIHNPLYPITVDVLHQVFSPHGFVEKIVTFTKSAGL 122
Query: 168 QALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
QAL+QY +AV A+ L+G IYDG C L I YS +L + NN+R+RD+T + P
Sbjct: 123 QALLQYASQSSAVQARSTLQGRNIYDGC-CTLDIQYSNLQELQVNYNNERTRDFTNAALP 181
Query: 228 MVNSQP 233
S+P
Sbjct: 182 SEQSRP 187
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 106/222 (47%), Gaps = 34/222 (15%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + QVFS GFV KI TF K+AG QAL+Q++ +A A++ L GR+I
Sbjct: 95 ITVDVLHQVFSPHGFVEKIVTFTKSAGLQALLQYASQSSAVQARSTLQGRNIYD------ 148
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQ--------------- 112
G CTL I YS +L V + + R+RD+TN LP S G
Sbjct: 149 -GCCTLDIQYSNLQELQVNYNNERTRDFTNAALPSEQSRPGNPGNNIMVAMGGASAAAAA 207
Query: 113 ----LSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQ 168
L G+ G S +L++++ + + D L +FS +G + +I + N
Sbjct: 208 FGGVLPPGITGTN--DRSTLLVSNL--VPEKIDADRLFNLFSNYGNIVRIKIL-HNKPDH 262
Query: 169 ALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLS 210
ALIQ D A +A L+G ++ ++ +++S+H ++
Sbjct: 263 ALIQMGDGFQAELAFNYLKGVTLFGK---RMDVNFSKHAQIN 301
>gi|432915659|ref|XP_004079197.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Oryzias
latipes]
Length = 523
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/119 (47%), Positives = 70/119 (58%), Gaps = 6/119 (5%)
Query: 124 PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAK 183
P S VL I+NM Y VTLDVL +FS FG V KI F KN QAL+Q+ D A AK
Sbjct: 160 PPSPVLRIIIDNMFYPVTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFSDPVNAQQAK 219
Query: 184 EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM-----VNSQPSILG 237
+L+G IY+ C L I +S+ +L++K NND+SRDYT P P N S+LG
Sbjct: 220 LSLDGQNIYN-SCCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPTGDGDSANKDHSLLG 277
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 106/244 (43%), Gaps = 64/244 (26%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+QFSD A AK +LDG++I CTLR
Sbjct: 183 QIFSKFGTVMKIITFTKNNQFQALLQFSDPVNAQQAKLSLDGQNIYN-------SCCTLR 235
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDA-----------SGQLS--------- 114
I +S +L+VK+ + +SRDYT P LP D+ SG L+
Sbjct: 236 IDFSKLVNLNVKYNNDKSRDYTRPDLPTGDG--DSANKDHSLLGTPSGALASYSSGGSYS 293
Query: 115 ---------------------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHM 147
V L G + S VLLAS N + VT L
Sbjct: 294 SSLSLSQGGGAISPLSAAAAAAAAAGRVALSGSGV---SGVLLASNLN-EEMVTPQSLFT 349
Query: 148 VFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHT 207
+F +G VQ++ + N ALIQ D A +A L G ++ + ++ S+H
Sbjct: 350 LFGVYGDVQRVKIL-YNKKDSALIQLSDGNQAQLAMSHLNGQKVFGK---VMRVTLSKHQ 405
Query: 208 DLSI 211
+++
Sbjct: 406 TVAL 409
>gi|328867981|gb|EGG16362.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 656
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 77/116 (66%), Gaps = 3/116 (2%)
Query: 122 LEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 181
+E +N+LL +I N+ Y VT++VL+ +F +G V KI +F K+G Q+L+Q +++A+
Sbjct: 332 VETPNNILLVTISNIVYPVTIEVLYQLFGKYGSVLKILIFSKSGNFQSLVQLHSLESAIQ 391
Query: 182 AKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILG 237
AK L+G IY G C + I YS ++L IK NND+SRD+T P+ +++ PS +G
Sbjct: 392 AKRELDGQSIYSGC-CTMKIQYSSLSNLRIKYNNDKSRDFTNPT--LMSGIPSTIG 444
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 63/106 (59%), Gaps = 12/106 (11%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCT 72
+ Q+F +G V KI F K+ FQ+LVQ E+A AK LDG+SI G CT
Sbjct: 355 LYQLFGKYGSVLKILIFSKSGNFQSLVQLHSLESAIQAKRELDGQSIYS-------GCCT 407
Query: 73 LRITYSAHTDLSVKFQSHRSRDYTNPYLPVA-PSAI----DASGQL 113
++I YS+ ++L +K+ + +SRD+TNP L PS I +++GQL
Sbjct: 408 MKIQYSSLSNLRIKYNNDKSRDFTNPTLMSGIPSTIGFGNNSAGQL 453
>gi|294461205|gb|ADE76165.1| unknown [Picea sitchensis]
Length = 461
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 110/222 (49%), Gaps = 48/222 (21%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETA-------SSAKNALDGRSIPRYLLP 65
+LQ+ FG V K+ A QAL+Q +D +A S+ + ++ GR++
Sbjct: 22 LLQLVQRFGTVTKLVMLR--AKNQALMQMNDIPSAITVLDHYSTVQPSIRGRNV------ 73
Query: 66 ENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPE 125
I +S+H +L+ QS ++R +G +
Sbjct: 74 --------YIQFSSHQELTTTEQSGQARR-----------------------NGDQDSQP 102
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ +LL +I ++ Y +T++VLH VFS G V+KI +F K GLQA +QY Q A+ A
Sbjct: 103 NRILLVTIHHLLYPITVEVLHQVFSPHGFVEKIVIFQK-SGLQAFVQYSSRQNAIQASNT 161
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
L+G IYDG C+L I +S +L + NN+R+RD+T PS P
Sbjct: 162 LQGRNIYDGC-CQLDIQFSNLPELQVNYNNERTRDFTNPSLP 202
>gi|440804444|gb|ELR25321.1| hnRNPL/PTB/hephaestus splicing factor subfamily protein
[Acanthamoeba castellanii str. Neff]
Length = 575
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/116 (43%), Positives = 72/116 (62%), Gaps = 2/116 (1%)
Query: 123 EPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVA 182
E +++LL ++ N+ Y VT+D+LH VFS +G + KI +F K G QALIQ D A A
Sbjct: 202 EQSNHILLVTVTNLVYPVTIDILHQVFSKYGAIHKIVIFSKK-GFQALIQMGDKNQAQAA 260
Query: 183 KEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 238
K+AL+G IY G C L I YS L++K NND+SRD+T + P ++ +GQ
Sbjct: 261 KQALDGQNIYS-GCCTLRIQYSNLPSLNVKYNNDKSRDFTNNNLPSGDAAGPAVGQ 315
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 113/244 (46%), Gaps = 50/244 (20%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
QVFS +G +HKI F K GFQAL+Q D A +AK ALDG++I G CTLR
Sbjct: 226 QVFSKYGAIHKIVIFSKK-GFQALIQMGDKNQAQAAKQALDGQNI-------YSGCCTLR 277
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLD--GKKLEPESN----- 127
I YS L+VK+ + +SRD+TN LP +A A GQ L+ G L P+++
Sbjct: 278 IQYSNLPSLNVKYNNDKSRDFTNNNLPSGDAAGPAVGQFGGALNPLGLGLFPDASYGGYH 337
Query: 128 -------------------------VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFD 162
+++ +E + VT DVL +F +G V ++ +
Sbjct: 338 VSPAAFGYGQKQGAVGMAMGMGPSVLIVNGLEAER--VTPDVLFTLFGVYGDVLRVKIL- 394
Query: 163 KNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDR----S 218
N AL+Q+ Q A A L ++ L I++S+H +++ +
Sbjct: 395 YNKTDTALVQFATPQQAETALANLNQAPLFGR---TLTINFSKHNTIAMPREGTEGAHLT 451
Query: 219 RDYT 222
+DYT
Sbjct: 452 KDYT 455
>gi|241997960|ref|XP_002433623.1| polypyrimidine tract binding protein, putative [Ixodes scapularis]
gi|215495382|gb|EEC05023.1| polypyrimidine tract binding protein, putative [Ixodes scapularis]
Length = 512
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 65/100 (65%), Gaps = 1/100 (1%)
Query: 128 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 187
VL ++N Y V+LD+LH +FS G V KI F K+ QALIQ+ DV A AK AL+
Sbjct: 173 VLRVVVDNQIYPVSLDLLHGIFSRAGKVLKIVTFTKSNTFQALIQFSDVMGAQAAKLALD 232
Query: 188 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
G IY+ C L I YS+ T+L++K NND+SRD+T P+ P
Sbjct: 233 GQSIYN-ACCTLRIEYSKLTNLNVKYNNDKSRDFTNPTLP 271
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 100/194 (51%), Gaps = 32/194 (16%)
Query: 16 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 75
+FS G V KI TF K+ FQAL+QFSD A +AK ALDG+SI CTLRI
Sbjct: 193 IFSRAGKVLKIVTFTKSNTFQALIQFSDVMGAQAAKLALDGQSIYN-------ACCTLRI 245
Query: 76 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDA------------------SGQLSVGL 117
YS T+L+VK+ + +SRD+TNP LP +D S ++G+
Sbjct: 246 EYSKLTNLNVKYNNDKSRDFTNPTLPTGDPTLDNLGLAGLPLGGFALSPSNPSAATALGM 305
Query: 118 DGKKLEPE---SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA-MFDKNGGLQALIQY 173
G +L + S VLL S N Q VT D L +F +G V ++ +F+K ALIQ
Sbjct: 306 AGIRLPGQGTASCVLLVSNLNEQM-VTPDALFTLFGVYGDVIRVKILFNKKDS--ALIQM 362
Query: 174 PDVQTAVVAKEALE 187
+ Q A +A L+
Sbjct: 363 AEPQQAQLAMSHLD 376
>gi|348531446|ref|XP_003453220.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Oreochromis
niloticus]
Length = 523
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 55/119 (46%), Positives = 70/119 (58%), Gaps = 6/119 (5%)
Query: 124 PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAK 183
P S VL I+NM Y VTLDVL +FS FG V KI F KN QAL+Q+ D A AK
Sbjct: 160 PPSPVLRIIIDNMFYPVTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFSDPVNAQQAK 219
Query: 184 EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM-----VNSQPSILG 237
+L+G IY+ C L I +S+ ++++K NND+SRDYT P P N S+LG
Sbjct: 220 LSLDGQNIYN-SCCTLRIDFSKLVNVNVKYNNDKSRDYTRPDLPTGDGESTNKDHSLLG 277
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 110/254 (43%), Gaps = 65/254 (25%)
Query: 3 LTLSLLKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRY 62
+TL +L+ Q+FS FG V KI TF K FQAL+QFSD A AK +LDG++I
Sbjct: 176 VTLDVLQ-----QIFSKFGTVMKIITFTKNNQFQALLQFSDPVNAQQAKLSLDGQNIYNS 230
Query: 63 LLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDA---------SGQL 113
CTLRI +S +++VK+ + +SRDYT P LP SG L
Sbjct: 231 C-------CTLRIDFSKLVNVNVKYNNDKSRDYTRPDLPTGDGESTNKDHSLLGTPSGAL 283
Query: 114 S------------------------------------VGLDGKKLEPESNVLLASIENMQ 137
+ V L G + S VLLAS N +
Sbjct: 284 ASYSSGGGYSSSLSLSQGGGAISPLSAAAAAAAAAGRVALSGSGV---SGVLLASNLN-E 339
Query: 138 YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFC 197
VT L +F +G VQ++ + N ALIQ D A +A L G ++
Sbjct: 340 EMVTPQSLFTLFGVYGDVQRVKIL-YNKKDSALIQLSDGNQAQLAMSHLNGQKVFGK--- 395
Query: 198 KLHISYSRHTDLSI 211
+ ++ S+H +++
Sbjct: 396 VMRVTLSKHQTVAL 409
>gi|196010463|ref|XP_002115096.1| hypothetical protein TRIADDRAFT_28601 [Trichoplax adhaerens]
gi|190582479|gb|EDV22552.1| hypothetical protein TRIADDRAFT_28601, partial [Trichoplax
adhaerens]
Length = 476
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 52/108 (48%), Positives = 69/108 (63%), Gaps = 2/108 (1%)
Query: 124 PES-NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVA 182
PE+ VL SI+N+ Y VTLD+L+ +FS FG V+KI F KN QALIQ+ D A A
Sbjct: 120 PEAGRVLHISIDNLVYPVTLDILNQIFSKFGVVEKIITFTKNNLYQALIQFTDAVDAQNA 179
Query: 183 KEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVN 230
K +L+G IY G C L I YS+ +++K NND+SRD+T T +N
Sbjct: 180 KLSLDGQSIY-YGCCTLKIDYSKLLSINVKYNNDKSRDFTKNVTTRIN 226
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 107/232 (46%), Gaps = 47/232 (20%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K +QAL+QF+D A +AK +LDG+SI G CTL+
Sbjct: 144 QIFSKFGVVEKIITFTKNNLYQALIQFTDAVDAQNAKLSLDGQSIY-------YGCCTLK 196
Query: 75 ITYSAHTDLSVKFQSHRSRDYT-NPYLPVAPSAIDASGQLSVGL---------DGKKLEP 124
I YS ++VK+ + +SRD+T N + P+A S + V L+
Sbjct: 197 IDYSKLLSINVKYNNDKSRDFTKNVTTRINPTAGATSIAIPVATILSPLTAIATTSPLQS 256
Query: 125 ESNVLLASIE------NMQY------------------AVTLDVLHMVFSAFGPVQKIA- 159
S++L A I+ N+ Y VT L ++F +G V ++
Sbjct: 257 TSDLLTAPIQQQLSEGNLGYDNSSYVGSVIHVTNLNEAKVTPRALFILFGVYGDVYRVKI 316
Query: 160 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 211
+F+K ALIQ + A A L G +Y K+ +S S++ + +
Sbjct: 317 LFNKKD--TALIQMAEPHQAQTAIAHLHGIQLYGK---KMFVSSSKYAQVQL 363
>gi|301103606|ref|XP_002900889.1| polypyrimidine tract-binding protein, putative [Phytophthora
infestans T30-4]
gi|262101644|gb|EEY59696.1| polypyrimidine tract-binding protein, putative [Phytophthora
infestans T30-4]
Length = 655
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 77/124 (62%), Gaps = 6/124 (4%)
Query: 108 DASGQLSV-GLDG--KKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKN 164
D GQL + +DG + + P + +L+ S+ ++Y VT+DVL VF FG VQKI F K+
Sbjct: 146 DNGGQLGLLPIDGPRRGIGPPNQILMVSVSKIEYDVTVDVLQQVFQKFGNVQKIVTFWKD 205
Query: 165 GGLQALIQYPDVQTAVVAKEALEGHCIYDGGFC-KLHISYSRHTDLSIKVNNDRSRDYTL 223
++L+Q V A A+ AL+G IY G C +L I +SRH +L ++ N+DRSRDYT
Sbjct: 206 NEFKSLVQMESVDQAQAAQSALDGRDIYTG--CNQLSIVFSRHPELRVRYNDDRSRDYTN 263
Query: 224 PSTP 227
P+ P
Sbjct: 264 PNLP 267
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 67/133 (50%), Gaps = 15/133 (11%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + QVF FG V KI TF K F++LVQ + A +A++ALDGR I
Sbjct: 181 VTVDVLQQVFQKFGNVQKIVTFWKDNEFKSLVQMESVDQAQAAQSALDGRDI-------Y 233
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN 127
G L I +S H +L V++ RSRDYTNP LP P G D + EP +
Sbjct: 234 TGCNQLSIVFSRHPELRVRYNDDRSRDYTNPNLPPGPG--------RGGDDRNEGEPATT 285
Query: 128 VLLASIENMQYAV 140
+L E QY++
Sbjct: 286 ILSDRREPPQYSI 298
>gi|115634663|ref|XP_001176080.1| PREDICTED: polypyrimidine tract-binding protein 3-like isoform 1
[Strongylocentrotus purpuratus]
Length = 617
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 64/97 (65%), Gaps = 1/97 (1%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ +L +EN+ Y +T+D LH +F +G V +I F K+G QAL+Q+ D A VAK
Sbjct: 240 NTILRVIVENVTYQITVDTLHEIFRKYGTVLRIVTFIKSGQFQALVQFSDASQAAVAKLE 299
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 222
L+G IY+ C+L I +S+ T+LS+K NN++SRDYT
Sbjct: 300 LDGKNIYN-NCCQLRIDFSKLTNLSVKYNNEKSRDYT 335
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 51/82 (62%), Gaps = 7/82 (8%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
++F +G V +I TF K+ FQALVQFSD A+ AK LDG++I C LR
Sbjct: 261 EIFRKYGTVLRIVTFIKSGQFQALVQFSDASQAAVAKLELDGKNIYNNC-------CQLR 313
Query: 75 ITYSAHTDLSVKFQSHRSRDYT 96
I +S T+LSVK+ + +SRDYT
Sbjct: 314 IDFSKLTNLSVKYNNEKSRDYT 335
>gi|390332444|ref|XP_003723502.1| PREDICTED: polypyrimidine tract-binding protein 3-like isoform 5
[Strongylocentrotus purpuratus]
Length = 555
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 64/97 (65%), Gaps = 1/97 (1%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ +L +EN+ Y +T+D LH +F +G V +I F K+G QAL+Q+ D A VAK
Sbjct: 212 NTILRVIVENVTYQITVDTLHEIFRKYGTVLRIVTFIKSGQFQALVQFSDASQAAVAKLE 271
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 222
L+G IY+ C+L I +S+ T+LS+K NN++SRDYT
Sbjct: 272 LDGKNIYN-NCCQLRIDFSKLTNLSVKYNNEKSRDYT 307
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 105/218 (48%), Gaps = 40/218 (18%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
++F +G V +I TF K+ FQALVQFSD A+ AK LDG++I C LR
Sbjct: 233 EIFRKYGTVLRIVTFIKSGQFQALVQFSDASQAAVAKLELDGKNIYN-------NCCQLR 285
Query: 75 ITYSAHTDLSVKFQSHRSRDYTN---------------------PYLPVAPSAI---DAS 110
I +S T+LSVK+ + +SRDYT P P SA+ A+
Sbjct: 286 IDFSKLTNLSVKYNNEKSRDYTCDLPQGDGLTGVDPSTAAMLGVPGFPAGLSALPHHAAA 345
Query: 111 GQLSVGLDGKKLEPESNVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIA-MFDKNGGLQ 168
+ + G + S+V+L S N+ VT L +F +G VQ++ +++K
Sbjct: 346 AAQGMRMPGMYMPSGSSVILVS--NLTPELVTPQALFTLFGVYGDVQRVKILYEKRDN-- 401
Query: 169 ALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRH 206
ALIQ D + +A + L G +Y ++ ++ S+H
Sbjct: 402 ALIQMSDPNQSQLAMKHLSGVKLYGK---QIRVTASKH 436
>gi|390332442|ref|XP_003723501.1| PREDICTED: polypyrimidine tract-binding protein 3-like isoform 4
[Strongylocentrotus purpuratus]
Length = 662
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 64/97 (65%), Gaps = 1/97 (1%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ +L +EN+ Y +T+D LH +F +G V +I F K+G QAL+Q+ D A VAK
Sbjct: 319 NTILRVIVENVTYQITVDTLHEIFRKYGTVLRIVTFIKSGQFQALVQFSDASQAAVAKLE 378
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 222
L+G IY+ C+L I +S+ T+LS+K NN++SRDYT
Sbjct: 379 LDGKNIYN-NCCQLRIDFSKLTNLSVKYNNEKSRDYT 414
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 105/218 (48%), Gaps = 40/218 (18%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
++F +G V +I TF K+ FQALVQFSD A+ AK LDG++I C LR
Sbjct: 340 EIFRKYGTVLRIVTFIKSGQFQALVQFSDASQAAVAKLELDGKNIYN-------NCCQLR 392
Query: 75 ITYSAHTDLSVKFQSHRSRDYTN---------------------PYLPVAPSAI---DAS 110
I +S T+LSVK+ + +SRDYT P P SA+ A+
Sbjct: 393 IDFSKLTNLSVKYNNEKSRDYTCDLPQGDGLTGVDPSTAAMLGVPGFPAGLSALPHHAAA 452
Query: 111 GQLSVGLDGKKLEPESNVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIA-MFDKNGGLQ 168
+ + G + S+V+L S N+ VT L +F +G VQ++ +++K
Sbjct: 453 AAQGMRMPGMYMPSGSSVILVS--NLTPELVTPQALFTLFGVYGDVQRVKILYEKRDN-- 508
Query: 169 ALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRH 206
ALIQ D + +A + L G +Y ++ ++ S+H
Sbjct: 509 ALIQMSDPNQSQLAMKHLSGVKLYGK---QIRVTASKH 543
>gi|85003003|gb|ABC68595.1| polypyrimidine tract binding protein [Paracentrotus lividus]
Length = 618
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 64/97 (65%), Gaps = 1/97 (1%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ +L +EN+ Y +T+D LH +F +G V +I F K+G QAL+Q+ D A VAK
Sbjct: 242 NTILRVIVENVTYQITVDTLHEIFRKYGTVLRIVTFIKSGQFQALVQFADASQAAVAKLE 301
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 222
L+G IY+ C+L I +S+ T+LS+K NN++SRDYT
Sbjct: 302 LDGKNIYN-NCCQLRIDFSKLTNLSVKYNNEKSRDYT 337
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 51/82 (62%), Gaps = 7/82 (8%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
++F +G V +I TF K+ FQALVQF+D A+ AK LDG++I C LR
Sbjct: 263 EIFRKYGTVLRIVTFIKSGQFQALVQFADASQAAVAKLELDGKNIYN-------NCCQLR 315
Query: 75 ITYSAHTDLSVKFQSHRSRDYT 96
I +S T+LSVK+ + +SRDYT
Sbjct: 316 IDFSKLTNLSVKYNNEKSRDYT 337
>gi|390332437|ref|XP_003723500.1| PREDICTED: polypyrimidine tract-binding protein 3-like isoform 3
[Strongylocentrotus purpuratus]
Length = 649
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 64/97 (65%), Gaps = 1/97 (1%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ +L +EN+ Y +T+D LH +F +G V +I F K+G QAL+Q+ D A VAK
Sbjct: 272 NTILRVIVENVTYQITVDTLHEIFRKYGTVLRIVTFIKSGQFQALVQFSDASQAAVAKLE 331
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 222
L+G IY+ C+L I +S+ T+LS+K NN++SRDYT
Sbjct: 332 LDGKNIYN-NCCQLRIDFSKLTNLSVKYNNEKSRDYT 367
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 51/82 (62%), Gaps = 7/82 (8%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
++F +G V +I TF K+ FQALVQFSD A+ AK LDG++I C LR
Sbjct: 293 EIFRKYGTVLRIVTFIKSGQFQALVQFSDASQAAVAKLELDGKNIYNNC-------CQLR 345
Query: 75 ITYSAHTDLSVKFQSHRSRDYT 96
I +S T+LSVK+ + +SRDYT
Sbjct: 346 IDFSKLTNLSVKYNNEKSRDYT 367
>gi|363744882|ref|XP_424912.3| PREDICTED: regulator of differentiation 1 [Gallus gallus]
Length = 552
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 93/191 (48%), Gaps = 33/191 (17%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
S+VL IEN+ Y V+L+VL+ +FS FG V KI F +N QALIQY + A AK A
Sbjct: 197 SSVLRIIIENLFYPVSLEVLYQIFSKFGFVLKIVTFTRNNQFQALIQYAEPVNAYYAKMA 256
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPV--PM 243
L G IY+ C LHI +S+ T L +K NN++SRD+T P + GQ P+ +
Sbjct: 257 LNGRNIYNAC-CTLHIDFSKLTSLKVKYNNEKSRDFTRFDLPAAD------GQLPLDPAI 309
Query: 244 VGATANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMPMMGNHPYMPPGSMPMGPG 303
+ A +Q G F P G G + P + Y P G++
Sbjct: 310 IAAFGSQ--GIIFQP------------YVGTGGIGPVT----------YFPQGAVTTSVA 345
Query: 304 MMQMHMPGQSG 314
++M PG G
Sbjct: 346 SVRMSNPGVPG 356
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 123/254 (48%), Gaps = 53/254 (20%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
L+V++ Q+FS FGFV KI TF + FQAL+Q+++ A AK AL+GR+I
Sbjct: 213 LEVLY--QIFSKFGFVLKIVTFTRNNQFQALIQYAEPVNAYYAKMALNGRNIYN------ 264
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVA-------PSAIDA----------- 109
CTL I +S T L VK+ + +SRD+T LP A P+ I A
Sbjct: 265 -ACCTLHIDFSKLTSLKVKYNNEKSRDFTRFDLPAADGQLPLDPAIIAAFGSQGIIFQPY 323
Query: 110 -------------SGQLSVGLDGKKLE----PESNVLLASIENMQYAVTLDVLHMVFSAF 152
G ++ + ++ P ++VLL S N + A+T L ++F A+
Sbjct: 324 VGTGGIGPVTYFPQGAVTTSVASVRMSNPGVPGNSVLLVSNLNPE-AITPHGLFILFGAY 382
Query: 153 GPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI- 211
G V ++ + KN AL+Q D A +A L G +Y G F + + S+H ++ +
Sbjct: 383 GDVLRVKIMFKNKE-NALVQMADATQAQIAISNLNGQKLY-GKFIR--ATLSKHQNIQLP 438
Query: 212 ---KVNNDRSRDYT 222
+ +N ++DY+
Sbjct: 439 REGEEDNGLTKDYS 452
>gi|390332446|ref|XP_003723503.1| PREDICTED: polypyrimidine tract-binding protein 3-like isoform 6
[Strongylocentrotus purpuratus]
Length = 603
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 64/97 (65%), Gaps = 1/97 (1%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ +L +EN+ Y +T+D LH +F +G V +I F K+G QAL+Q+ D A VAK
Sbjct: 260 NTILRVIVENVTYQITVDTLHEIFRKYGTVLRIVTFIKSGQFQALVQFSDASQAAVAKLE 319
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 222
L+G IY+ C+L I +S+ T+LS+K NN++SRDYT
Sbjct: 320 LDGKNIYN-NCCQLRIDFSKLTNLSVKYNNEKSRDYT 355
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 105/218 (48%), Gaps = 40/218 (18%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
++F +G V +I TF K+ FQALVQFSD A+ AK LDG++I C LR
Sbjct: 281 EIFRKYGTVLRIVTFIKSGQFQALVQFSDASQAAVAKLELDGKNIYN-------NCCQLR 333
Query: 75 ITYSAHTDLSVKFQSHRSRDYTN---------------------PYLPVAPSAI---DAS 110
I +S T+LSVK+ + +SRDYT P P SA+ A+
Sbjct: 334 IDFSKLTNLSVKYNNEKSRDYTCDLPQGDGLTGVDPSTAAMLGVPGFPAGLSALPHHAAA 393
Query: 111 GQLSVGLDGKKLEPESNVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIA-MFDKNGGLQ 168
+ + G + S+V+L S N+ VT L +F +G VQ++ +++K
Sbjct: 394 AAQGMRMPGMYMPSGSSVILVS--NLTPELVTPQALFTLFGVYGDVQRVKILYEKRDN-- 449
Query: 169 ALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRH 206
ALIQ D + +A + L G +Y ++ ++ S+H
Sbjct: 450 ALIQMSDPNQSQLAMKHLSGVKLYGK---QIRVTASKH 484
>gi|390332439|ref|XP_780392.3| PREDICTED: polypyrimidine tract-binding protein 3-like isoform 7
[Strongylocentrotus purpuratus]
Length = 659
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 64/97 (65%), Gaps = 1/97 (1%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ +L +EN+ Y +T+D LH +F +G V +I F K+G QAL+Q+ D A VAK
Sbjct: 282 NTILRVIVENVTYQITVDTLHEIFRKYGTVLRIVTFIKSGQFQALVQFSDASQAAVAKLE 341
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 222
L+G IY+ C+L I +S+ T+LS+K NN++SRDYT
Sbjct: 342 LDGKNIYN-NCCQLRIDFSKLTNLSVKYNNEKSRDYT 377
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 51/82 (62%), Gaps = 7/82 (8%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
++F +G V +I TF K+ FQALVQFSD A+ AK LDG++I C LR
Sbjct: 303 EIFRKYGTVLRIVTFIKSGQFQALVQFSDASQAAVAKLELDGKNIYN-------NCCQLR 355
Query: 75 ITYSAHTDLSVKFQSHRSRDYT 96
I +S T+LSVK+ + +SRDYT
Sbjct: 356 IDFSKLTNLSVKYNNEKSRDYT 377
>gi|390332435|ref|XP_003723499.1| PREDICTED: polypyrimidine tract-binding protein 3-like isoform 2
[Strongylocentrotus purpuratus]
Length = 631
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 64/97 (65%), Gaps = 1/97 (1%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ +L +EN+ Y +T+D LH +F +G V +I F K+G QAL+Q+ D A VAK
Sbjct: 254 NTILRVIVENVTYQITVDTLHEIFRKYGTVLRIVTFIKSGQFQALVQFSDASQAAVAKLE 313
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 222
L+G IY+ C+L I +S+ T+LS+K NN++SRDYT
Sbjct: 314 LDGKNIYN-NCCQLRIDFSKLTNLSVKYNNEKSRDYT 349
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 51/82 (62%), Gaps = 7/82 (8%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
++F +G V +I TF K+ FQALVQFSD A+ AK LDG++I C LR
Sbjct: 275 EIFRKYGTVLRIVTFIKSGQFQALVQFSDASQAAVAKLELDGKNIYN-------NCCQLR 327
Query: 75 ITYSAHTDLSVKFQSHRSRDYT 96
I +S T+LSVK+ + +SRDYT
Sbjct: 328 IDFSKLTNLSVKYNNEKSRDYT 349
>gi|198434994|ref|XP_002131704.1| PREDICTED: similar to polypyrimidine tract binding protein-like
isoform 2 [Ciona intestinalis]
Length = 495
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/113 (46%), Positives = 67/113 (59%), Gaps = 3/113 (2%)
Query: 128 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 187
VL +ENM Y +TLDVLH +F+ FG V K F KN QAL+Q D + AK +L+
Sbjct: 149 VLRVVVENMLYPITLDVLHTIFTKFGVVLKTITFTKNNQFQALLQMGDAIQSQTAKLSLD 208
Query: 188 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQP 240
G IY+G C L I YS+ L++K NND+SRDYT P + + SIL P
Sbjct: 209 GQNIYNGC-CTLRIEYSKLPALNVKYNNDKSRDYTRNDLP--SGESSILNNPP 258
>gi|328869052|gb|EGG17430.1| hypothetical protein DFA_08425 [Dictyostelium fasciculatum]
Length = 603
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 68/105 (64%), Gaps = 2/105 (1%)
Query: 123 EPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVA 182
P N+LL +IEN V +D+L+ FS +G V +I +F+K+ LQAL++Y + A A
Sbjct: 122 RPIGNILLCTIENATMTVNVDLLNHFFSLYGEVLRIVIFNKSVNLQALVEYSSPELAFHA 181
Query: 183 KEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT--LPS 225
K+ L+G +Y GG+C L I S+ L++ +NNDR+RDYT LPS
Sbjct: 182 KKLLQGAMLYQGGYCVLRIEISKVDRLNVTLNNDRTRDYTKNLPS 226
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 17 FSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRIT 76
FS +G V +I F K+ QALV++S E A AK L G + + G C LRI
Sbjct: 148 FSLYGEVLRIVIFNKSVNLQALVEYSSPELAFHAKKLLQGAMLYQ------GGYCVLRIE 201
Query: 77 YSAHTDLSVKFQSHRSRDYT 96
S L+V + R+RDYT
Sbjct: 202 ISKVDRLNVTLNNDRTRDYT 221
>gi|198434992|ref|XP_002131695.1| PREDICTED: similar to polypyrimidine tract binding protein-like
isoform 1 [Ciona intestinalis]
Length = 528
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/113 (46%), Positives = 67/113 (59%), Gaps = 3/113 (2%)
Query: 128 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 187
VL +ENM Y +TLDVLH +F+ FG V K F KN QAL+Q D + AK +L+
Sbjct: 149 VLRVVVENMLYPITLDVLHTIFTKFGVVLKTITFTKNNQFQALLQMGDAIQSQTAKLSLD 208
Query: 188 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQP 240
G IY+G C L I YS+ L++K NND+SRDYT P + + SIL P
Sbjct: 209 GQNIYNGC-CTLRIEYSKLPALNVKYNNDKSRDYTRNDLP--SGESSILNNPP 258
>gi|294460075|gb|ADE75620.1| unknown [Picea sitchensis]
Length = 471
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 66/102 (64%), Gaps = 1/102 (0%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ +LL +I ++ + +T++VLH VFS G V+KI F K+ GLQALIQY Q AV AK
Sbjct: 103 NRILLVTIHHLLFPITVEVLHQVFSPCGFVEKIVTFQKSAGLQALIQYTSQQNAVQAKNN 162
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
L+G IYDG C+L I +S L + N+RSRD+T PS P
Sbjct: 163 LQGRNIYDGC-CQLDIQFSNLNGLQVHYINERSRDFTNPSLP 203
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 56/94 (59%), Gaps = 7/94 (7%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + QVFS GFV KI TF+K+AG QAL+Q++ + A AKN L GR+I
Sbjct: 117 ITVEVLHQVFSPCGFVEKIVTFQKSAGLQALIQYTSQQNAVQAKNNLQGRNIYD------ 170
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLP 101
G C L I +S L V + + RSRD+TNP LP
Sbjct: 171 -GCCQLDIQFSNLNGLQVHYINERSRDFTNPSLP 203
>gi|297275604|ref|XP_002801040.1| PREDICTED: polypyrimidine tract-binding protein 1 [Macaca mulatta]
Length = 549
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 74/140 (52%), Gaps = 5/140 (3%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 173 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 232
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 238
A AK + +G IY+ C L NND+SRDYT P P +SQPS+
Sbjct: 233 AQHAKLSQDGQNIYN-ACCTLRXXXXXXXXXXXXYNNDKSRDYTRPDLPSGDSQPSL--- 288
Query: 239 QPVPMVGATANQYNGAQFAP 258
M A A+ Y GA F P
Sbjct: 289 -DQTMAAAFASPYAGAGFPP 307
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 102/251 (40%), Gaps = 71/251 (28%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D +A AK + DG++I CTLR
Sbjct: 201 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSQDGQNIYN-------ACCTLR 253
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS-------------------------AIDA 109
+ + +SRDYT P LP S AI
Sbjct: 254 XXXXXXXXXXXXYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFASPYAGAGFPPTFAIPQ 313
Query: 110 SGQLSV----------------------------GLDGKKLEPESNVLLASIENMQYAVT 141
+ LSV GL G ++VLL S N + VT
Sbjct: 314 AAGLSVPNVHGALAPLAIPSAAAAAAAAGRIAIPGLAGAG----NSVLLVSNLNPER-VT 368
Query: 142 LDVLHMVFSAFGPVQKIA-MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLH 200
L ++F +G VQ++ +F+K AL+Q D A +A L GH ++ +
Sbjct: 369 PQSLFILFGVYGDVQRVKILFNKKE--NALVQMADGNQAQLAMSHLNGHKLHGK---PIR 423
Query: 201 ISYSRHTDLSI 211
I+ S+H ++ +
Sbjct: 424 ITLSKHQNVQL 434
>gi|313234966|emb|CBY24911.1| unnamed protein product [Oikopleura dioica]
Length = 788
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 116/260 (44%), Gaps = 39/260 (15%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDG-RSIPRYLLPENMGPC 71
+ +FS FG V K+ TF K FQAL+Q A + K +G R + LP+++
Sbjct: 273 LTHLFSQFGNVLKVITFTKNNQFQALIQMDCESNAQAMKTEDEGSRVLHVRGLPDDVTEH 332
Query: 72 TL-RITYSAHT-DLSVKFQSHRSRDYT-------------NPYLPVAPSAI--------- 107
+ ++ T L V F +S++ Y + P I
Sbjct: 333 EIWKLVLPFKTLGLMVNFMHLKSKNQAFLEVDNIEMAREMAQYYLLNPPCIRQRTIHLQF 392
Query: 108 ---------DASGQLSVGLDGKKLEP----ESNVLLASIENMQYAVTLDVLHMVFSAFGP 154
++ Q + +D +K + ++VL +ENM Y TL+VL +FS FG
Sbjct: 393 SNHKQLSPPSSALQEKLLMDLRKFQEAEGGSNHVLRVVVENMTYPTTLEVLTHLFSQFGN 452
Query: 155 VQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVN 214
V K+ F KN QALIQ A AK +L+G +Y C L I YS+ L++K N
Sbjct: 453 VLKVITFTKNNQFQALIQMDCESNAQAAKLSLDGKNVYTNC-CTLRIDYSKLQQLNVKFN 511
Query: 215 NDRSRDYTLPSTPMVNSQPS 234
N++SRDYT P P + S
Sbjct: 512 NEKSRDYTRPELPQCDDYNS 531
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 34/63 (53%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
++VL +ENM Y TL+VL +FS FG V K+ F KN QALIQ A K
Sbjct: 254 NHVLRVVVENMTYPTTLEVLTHLFSQFGNVLKVITFTKNNQFQALIQMDCESNAQAMKTE 313
Query: 186 LEG 188
EG
Sbjct: 314 DEG 316
>gi|348686489|gb|EGZ26304.1| hypothetical protein PHYSODRAFT_350288 [Phytophthora sojae]
Length = 649
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 67/105 (63%), Gaps = 3/105 (2%)
Query: 124 PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAK 183
P + +L+ S+ ++Y VT+DVL VF FG V+KI F K+ +AL+Q V A A+
Sbjct: 164 PPNQILMVSVSKIEYDVTVDVLQQVFQKFGNVEKIVTFWKDNEFKALVQMESVDQAQAAQ 223
Query: 184 EALEGHCIYDGGFC-KLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
AL+G IY G C +L I +SRH +L ++ N+DRSRDYT P+ P
Sbjct: 224 SALDGRDIYTG--CNQLSIVFSRHPELRVRYNDDRSRDYTNPNLP 266
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 54/97 (55%), Gaps = 7/97 (7%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + QVF FG V KI TF K F+ALVQ + A +A++ALDGR I
Sbjct: 180 VTVDVLQQVFQKFGNVEKIVTFWKDNEFKALVQMESVDQAQAAQSALDGRDI-------Y 232
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAP 104
G L I +S H +L V++ RSRDYTNP LP P
Sbjct: 233 TGCNQLSIVFSRHPELRVRYNDDRSRDYTNPNLPPGP 269
>gi|432101132|gb|ELK29416.1| Polypyrimidine tract-binding protein 1 [Myotis davidii]
Length = 566
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 76/144 (52%), Gaps = 28/144 (19%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPD--- 175
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY +
Sbjct: 182 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYAEPVS 241
Query: 176 VQTAVV------------------------AKEALEGHCIYDGGFCKLHISYSRHTDLSI 211
Q A + AK +L+G IY+ C L I +S+ T L++
Sbjct: 242 AQHAKLIITFTKNKQFQALLQYAEPVSAQHAKLSLDGQNIYNAC-CTLRIDFSKLTSLNV 300
Query: 212 KVNNDRSRDYTLPSTPMVNSQPSI 235
K NND+SRDYT P P +SQPS+
Sbjct: 301 KYNNDKSRDYTRPDLPSGDSQPSL 324
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 102/217 (47%), Gaps = 44/217 (20%)
Query: 26 ITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAHTDLSV 85
I TF K FQAL+Q+++ +A AK +LDG++I CTLRI +S T L+V
Sbjct: 248 IITFTKNKQFQALLQYAEPVSAQHAKLSLDGQNIYN-------ACCTLRIDFSKLTSLNV 300
Query: 86 KFQSHRSRDYTNPYLPVAPS--AIDASGQLSVGLDGKKLE-------------------- 123
K+ + +SRDYT P LP S ++D + + GL +
Sbjct: 301 KYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGLSVPNVHGALAPLAIPSAAAAAAAAGR 360
Query: 124 --------PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA-MFDKNGGLQALIQYP 174
++VLL S N + VT L ++F +G VQ++ +F+K AL+Q
Sbjct: 361 IAIPGLGGAGNSVLLVSNLNPE-VVTPQSLFILFGVYGDVQRVKILFNKKE--NALVQMA 417
Query: 175 DVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 211
D A +A L GH ++ + I+ S+H ++ +
Sbjct: 418 DGSQAQLAMSHLNGHKLHGK---PVRITLSKHQNVQL 451
>gi|297275608|ref|XP_001092088.2| PREDICTED: polypyrimidine tract-binding protein 1 isoform 1 [Macaca
mulatta]
Length = 556
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/144 (43%), Positives = 76/144 (52%), Gaps = 6/144 (4%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 173 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 232
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 238
A AK + +G IY+ C L NND+SRDYT P P +SQPS L Q
Sbjct: 233 AQHAKLSQDGQNIYN-ACCTLRXXXXXXXXXXXXYNNDKSRDYTRPDLPSGDSQPS-LDQ 290
Query: 239 QPVPMVGA----TANQYNGAQFAP 258
GA +A+ Y GA F P
Sbjct: 291 TMAAAFGAPGIISASPYAGAGFPP 314
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D +A AK + DG++I CTLR
Sbjct: 201 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSQDGQNIYNAC-------CTLR 253
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 105
+ + +SRDYT P LP S
Sbjct: 254 XXXXXXXXXXXXYNNDKSRDYTRPDLPSGDS 284
>gi|255566638|ref|XP_002524303.1| polypyrimidine tract binding protein, putative [Ricinus communis]
gi|223536394|gb|EEF38043.1| polypyrimidine tract binding protein, putative [Ricinus communis]
Length = 437
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 104/220 (47%), Gaps = 47/220 (21%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCT 72
+LQ+F FG + K+ A QAL+Q D SA NAL N+ P T
Sbjct: 22 LLQLFQPFGVITKLVMLR--AKNQALLQMQDI---PSAINALQ--------FYGNVQP-T 67
Query: 73 LR-----ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN 127
+R + +S+H +L+ Q+ + R P++ + DG
Sbjct: 68 IRGRNVYVQFSSHQELTTMDQNSQGR-ADEPFVLAV--------RFKSNFDG-------- 110
Query: 128 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 187
+ ++VLH VFS G V+KI F K+ G QALIQY Q+AV A+ AL+
Sbjct: 111 ----------INIIVEVLHQVFSPHGFVEKIVTFQKSAGFQALIQYQLRQSAVAARTALQ 160
Query: 188 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
G IYDG C+L I +S +L + NNDRSRD+T P P
Sbjct: 161 GRNIYDGC-CQLDIQFSNLDELQVNYNNDRSRDFTNPHLP 199
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 108/220 (49%), Gaps = 39/220 (17%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
QVFS GFV KI TF+K+AGFQAL+Q+ ++A +A+ AL GR+I G C L
Sbjct: 120 QVFSPHGFVEKIVTFQKSAGFQALIQYQLRQSAVAARTALQGRNIYD-------GCCQLD 172
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDAS------------------------ 110
I +S +L V + + RSRD+TNP+LP +
Sbjct: 173 IQFSNLDELQVNYNNDRSRDFTNPHLPAEQKGRSSQAGYGDAGVAYPQMANAAAIAAAFG 232
Query: 111 GQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQAL 170
G L G+ G VL++++ + + D L +FS +G + +I + +N AL
Sbjct: 233 GGLPPGISGTN--DRCTVLVSNLNPDK--IDEDKLFNLFSLYGNIVRIKLL-RNKPDHAL 287
Query: 171 IQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLS 210
+Q D A +A L+G ++ +L +++S+H +++
Sbjct: 288 VQMGDGFQAELAVHFLKGAVLFGK---RLEVNFSKHPNIT 324
>gi|405953685|gb|EKC21299.1| Regulator of differentiation 1 [Crassostrea gigas]
Length = 764
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 63/95 (66%), Gaps = 1/95 (1%)
Query: 133 IENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 192
+E++ Y V ++VL+ +FS FG V K+ +F KN QALIQ D A AK +L+G IY
Sbjct: 399 VEHLVYPVGIEVLYQIFSKFGKVLKMIIFTKNNSFQALIQMSDPVAANAAKLSLDGQNIY 458
Query: 193 DGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
+ G C L I YS+ +L++K NND+SRD+T P+ P
Sbjct: 459 N-GCCTLRIDYSKLNNLNVKYNNDKSRDFTNPNLP 492
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 59/96 (61%), Gaps = 7/96 (7%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCT 72
+ Q+FS FG V K+ F K FQAL+Q SD A++AK +LDG++I G CT
Sbjct: 411 LYQIFSKFGKVLKMIIFTKNNSFQALIQMSDPVAANAAKLSLDGQNIYN-------GCCT 463
Query: 73 LRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID 108
LRI YS +L+VK+ + +SRD+TNP LP +D
Sbjct: 464 LRIDYSKLNNLNVKYNNDKSRDFTNPNLPSGDPGLD 499
>gi|297275606|ref|XP_001092214.2| PREDICTED: polypyrimidine tract-binding protein 1 isoform 2 [Macaca
mulatta]
Length = 530
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 65/117 (55%), Gaps = 1/117 (0%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 173 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 232
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
A AK + +G IY+ C L NND+SRDYT P P +SQPS+
Sbjct: 233 AQHAKLSQDGQNIYN-ACCTLRXXXXXXXXXXXXYNNDKSRDYTRPDLPSGDSQPSL 288
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 101/228 (44%), Gaps = 44/228 (19%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K FQAL+Q++D +A AK + DG++I CTLR
Sbjct: 201 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSQDGQNIYN-------ACCTLR 253
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS--AIDASGQLSVGLDGKKLE--------- 123
+ + +SRDYT P LP S ++D + + GL +
Sbjct: 254 XXXXXXXXXXXXYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGLSVPNVHGALAPLAIP 313
Query: 124 -------------------PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA-MFDK 163
++VLL S N + VT L ++F +G VQ++ +F+K
Sbjct: 314 SAAAAAAAAGRIAIPGLAGAGNSVLLVSNLNPE-RVTPQSLFILFGVYGDVQRVKILFNK 372
Query: 164 NGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 211
AL+Q D A +A L GH ++ + I+ S+H ++ +
Sbjct: 373 KE--NALVQMADGNQAQLAMSHLNGHKLHGK---PIRITLSKHQNVQL 415
>gi|321459460|gb|EFX70513.1| hypothetical protein DAPPUDRAFT_328086 [Daphnia pulex]
Length = 439
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/121 (41%), Positives = 77/121 (63%), Gaps = 7/121 (5%)
Query: 124 PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAK 183
PE+++LL +I N Y +T+DVLH + AFG V +I +F K+ G+QA++++ +V A AK
Sbjct: 14 PENHILLFTIVNPVYPITVDVLHTITQAFGEVLRIVIFKKH-GVQAMVEFANVDMARAAK 72
Query: 184 EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPM 243
E L+G IY G C L I Y++ T L++ N+ + DYT P TP +SQ Q+P P+
Sbjct: 73 EGLDGADIYS-GCCTLKIEYAKPTRLNVHKNDSETWDYTTP-TPGADSQR----QRPAPL 126
Query: 244 V 244
+
Sbjct: 127 L 127
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + + AFG V +I F+K G QA+V+F++ + A +AK LDG I
Sbjct: 30 ITVDVLHTITQAFGEVLRIVIFKK-HGVQAMVEFANVDMARAAKEGLDGADI-------Y 81
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNP 98
G CTL+I Y+ T L+V + DYT P
Sbjct: 82 SGCCTLKIEYAKPTRLNVHKNDSETWDYTTP 112
>gi|390466248|ref|XP_003733548.1| PREDICTED: LOW QUALITY PROTEIN: polypyrimidine tract-binding
protein 2 [Callithrix jacchus]
Length = 499
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/112 (45%), Positives = 66/112 (58%), Gaps = 2/112 (1%)
Query: 125 ESNVLLASIENMQYAVTLDVL-HMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAK 183
+S VL I+NM Y VT +FS FG V KI F KN QAL+QY D A AK
Sbjct: 185 QSPVLRIIIDNMYYPVTXXXXTKXIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAK 244
Query: 184 EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 245 LALDGQNIYNA-CCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 295
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 52/86 (60%), Gaps = 7/86 (8%)
Query: 16 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 75
+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLRI
Sbjct: 209 IFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLRI 261
Query: 76 TYSAHTDLSVKFQSHRSRDYTNPYLP 101
+S +L+VK+ + +SRDYT P LP
Sbjct: 262 DFSKLVNLNVKYNNDKSRDYTRPDLP 287
>gi|294909465|ref|XP_002777772.1| polypyrimidine tract binding protein, putative [Perkinsus marinus
ATCC 50983]
gi|239885734|gb|EER09567.1| polypyrimidine tract binding protein, putative [Perkinsus marinus
ATCC 50983]
Length = 632
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 69/109 (63%), Gaps = 5/109 (4%)
Query: 121 KLEPESN----VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDV 176
+ +P+SN +LL +I N+ Y VT+DV+ V + FG ++K+ +F++ +QAL+Q DV
Sbjct: 139 RRDPDSNPPNRILLFTITNLVYPVTVDVISQVMNKFGGLEKVIVFNRGNAVQALVQLADV 198
Query: 177 QTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 225
TA VAKE L+G IY G + + YS L +K NN+RS D+T PS
Sbjct: 199 DTANVAKEQLDGQNIY-AGCNTIKVQYSSLPQLEVKHNNERSWDFTNPS 246
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 58/107 (54%), Gaps = 9/107 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V I QV + FG + K+ F + QALVQ +D +TA+ AK LDG++I
Sbjct: 162 VTVDVISQVMNKFGGLEKVIVFNRGNAVQALVQLADVDTANVAKEQLDGQNI-------Y 214
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLS 114
G T+++ YS+ L VK + RS D+TNP L P ++A L+
Sbjct: 215 AGCNTIKVQYSSLPQLEVKHNNERSWDFTNPSL--LPGGMEAGSGLT 259
>gi|294955170|ref|XP_002788430.1| polypyrimidine tract binding protein, putative [Perkinsus marinus
ATCC 50983]
gi|239903853|gb|EER20226.1| polypyrimidine tract binding protein, putative [Perkinsus marinus
ATCC 50983]
Length = 366
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 69/109 (63%), Gaps = 5/109 (4%)
Query: 121 KLEPESN----VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDV 176
+ +P+SN +LL +I N+ Y VT+DV+ V + FG ++K+ +F++ +QAL+Q DV
Sbjct: 94 RRDPDSNPPNRILLFTITNLVYPVTVDVISQVMNKFGGLEKVIVFNRGNAVQALVQLADV 153
Query: 177 QTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 225
TA VAKE L+G IY G + + YS L +K NN+RS D+T PS
Sbjct: 154 DTANVAKEQLDGQNIY-AGCNTIKVQYSSLPQLEVKHNNERSWDFTNPS 201
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 57/107 (53%), Gaps = 9/107 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V I QV + FG + K+ F + QALVQ +D +TA+ AK LDG++I
Sbjct: 117 VTVDVISQVMNKFGGLEKVIVFNRGNAVQALVQLADVDTANVAKEQLDGQNIY------- 169
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLS 114
G T+++ YS+ L VK + RS D+TNP L P +D L+
Sbjct: 170 AGCNTIKVQYSSLPQLEVKHNNERSWDFTNPSL--LPGGMDGGSGLT 214
>gi|348524683|ref|XP_003449852.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 2
[Oreochromis niloticus]
Length = 518
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 92/177 (51%), Gaps = 16/177 (9%)
Query: 99 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 156
Y+ P+ I+ S + G + S NVLL +I N Y +T DVL+ + + GPVQ
Sbjct: 102 YIAGHPAFINYSTSQKISRPGDSDDTRSVNNVLLLTIINPIYPITTDVLYTICNNCGPVQ 161
Query: 157 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 216
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ L++ N+
Sbjct: 162 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPARLNVFKNDQ 219
Query: 217 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMVGATA--NQYNGAQFAPPPP 261
+ DYT P+ P N QP++LG P G + YN + PPPP
Sbjct: 220 DTWDYTNPNLSGQGDPNANPNKRQRQPALLGDHPPDYGGPQGGYHGYNDDSYGPPPP 276
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 3 LTLSLLKVIF------ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDG 56
L L+++ I+ + + + G V +I F K G QA+V+F ++A AK +L+G
Sbjct: 134 LLLTIINPIYPITTDVLYTICNNCGPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNG 192
Query: 57 RSIPRYLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
I G CTL+I Y+ L+V + DYTNP L
Sbjct: 193 ADIYS-------GCCTLKIEYAKPARLNVFKNDQDTWDYTNPNL 229
>gi|432895625|ref|XP_004076081.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Oryzias
latipes]
Length = 529
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 95/190 (50%), Gaps = 27/190 (14%)
Query: 99 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 156
Y+ P+ I+ S + G + S NVLL +I N Y +T DVL+ + + GPVQ
Sbjct: 102 YIAGHPAFINYSTSQKISRPGDSDDTRSVNNVLLLTILNPIYPITTDVLYTICNNCGPVQ 161
Query: 157 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 216
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 162 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 219
Query: 217 RSRDYTLPS----------------TPMVN-----SQPSILGQQPVPMVG--ATANQYNG 253
+ DYT P+ P N QP++LG P G + + YN
Sbjct: 220 DTWDYTNPNLSSQDADGEGNWNNSQDPNANPNKRQRQPALLGDHPPDYGGPQGSYHAYND 279
Query: 254 AQFAPPPPEQ 263
+ PPPP +
Sbjct: 280 DAYGPPPPHR 289
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 58/116 (50%), Gaps = 18/116 (15%)
Query: 3 LTLSLLKVIF------ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDG 56
L L++L I+ + + + G V +I F K G QA+V+F ++A AK +L+G
Sbjct: 134 LLLTILNPIYPITTDVLYTICNNCGPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNG 192
Query: 57 RSIPRYLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQ 112
I G CTL+I Y+ T L+V + DYTNP L S+ DA G+
Sbjct: 193 ADIYS-------GCCTLKIEYAKPTRLNVFKNDQDTWDYTNPNL----SSQDADGE 237
>gi|149056441|gb|EDM07872.1| rCG53531, isoform CRA_b [Rattus norvegicus]
Length = 456
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 99 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 156
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 30 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 89
Query: 157 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 216
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 90 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 147
Query: 217 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 261
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 148 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 205
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 3 LTLSLLKVIF------ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDG 56
L ++L I+ + + + G V +I F K G QA+V+F ++A AK +L+G
Sbjct: 62 LLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNG 120
Query: 57 RSIPRYLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
I G CTL+I Y+ T L+V + DYTNP L
Sbjct: 121 ADI-------YSGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPNL 157
>gi|52632385|ref|NP_001005335.1| heterogeneous nuclear ribonucleoprotein L isoform b [Homo sapiens]
gi|332855272|ref|XP_001167265.2| PREDICTED: heterogeneous nuclear ribonucleoprotein L isoform 4 [Pan
troglodytes]
gi|397482177|ref|XP_003812309.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L [Pan paniscus]
gi|403305233|ref|XP_003943172.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L [Saimiri
boliviensis boliviensis]
gi|158257662|dbj|BAF84804.1| unnamed protein product [Homo sapiens]
Length = 456
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 99 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 156
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 30 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 89
Query: 157 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 216
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 90 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIYS-GCCTLKIEYAKPTRLNVFKNDQ 147
Query: 217 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 261
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 148 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 205
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 3 LTLSLLKVIF------ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDG 56
L ++L I+ + + + G V +I F K G QA+V+F ++A AK +L+G
Sbjct: 62 LLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNG 120
Query: 57 RSIPRYLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
I G CTL+I Y+ T L+V + DYTNP L
Sbjct: 121 ADI-------YSGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPNL 157
>gi|432889396|ref|XP_004075256.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 1
[Oryzias latipes]
Length = 519
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 109/223 (48%), Gaps = 32/223 (14%)
Query: 66 ENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPE 125
E+M + +TY+A + Y+ P+ I+ S + G +
Sbjct: 81 EDMNGSSTAVTYAADNQV---------------YIAGHPAFINYSTSKKISRPGDSDDSR 125
Query: 126 S--NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAK 183
S NVLL +I N Y +T DVL+ + + GPVQ+I +F KN G+QA++++ VQ+A AK
Sbjct: 126 SVNNVLLFTIMNPIYPITTDVLYTICNNCGPVQRIVIFRKN-GVQAMVEFDSVQSAQRAK 184
Query: 184 EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPST---PMVNS-------QP 233
+L G IY G C L I Y++ T L++ N+ + DYT P+ +N+ QP
Sbjct: 185 ASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPNLGGPEDMNANPNKRPRQP 243
Query: 234 SILGQQPVPMVGATANQYNGAQFAPPPPEQPMMHQPTAAGWGA 276
++LG P P G + Y+ + PP E M PT G G
Sbjct: 244 ALLGDHP-PEYGGGYHGYD-ENYGSPPYEGRRM-GPTMRGRGG 283
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCT 72
+ + + G V +I F K G QA+V+F ++A AK +L+G I G CT
Sbjct: 147 LYTICNNCGPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIYS-------GCCT 198
Query: 73 LRITYSAHTDLSVKFQSHRSRDYTNPYL 100
L+I Y+ T L+V + DYTNP L
Sbjct: 199 LKIEYAKPTRLNVFKNDQDTWDYTNPNL 226
>gi|441652820|ref|XP_004093177.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein L [Nomascus leucogenys]
Length = 590
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 99 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 156
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 164 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 223
Query: 157 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 216
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 224 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 281
Query: 217 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 261
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 282 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 339
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 3 LTLSLLKVIF------ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDG 56
L ++L I+ + + + G V +I F K G QA+V+F ++A AK +L+G
Sbjct: 196 LLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNG 254
Query: 57 RSIPRYLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
I G CTL+I Y+ T L+V + DYTNP L
Sbjct: 255 ADI-------YSGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPNL 291
>gi|300796171|ref|NP_001178959.1| heterogeneous nuclear ribonucleoprotein L [Bos taurus]
gi|410983084|ref|XP_003997873.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L [Felis catus]
gi|296477716|tpg|DAA19831.1| TPA: heterogeneous nuclear ribonucleoprotein L [Bos taurus]
Length = 588
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 99 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 156
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 162 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 221
Query: 157 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 216
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 222 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 279
Query: 217 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 261
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 280 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 337
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 3 LTLSLLKVIF------ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDG 56
L ++L I+ + + + G V +I F K G QA+V+F ++A AK +L+G
Sbjct: 194 LLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNG 252
Query: 57 RSIPRYLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
I G CTL+I Y+ T L+V + DYTNP L
Sbjct: 253 ADI-------YSGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPNL 289
>gi|52632383|ref|NP_001524.2| heterogeneous nuclear ribonucleoprotein L isoform a [Homo sapiens]
gi|388452706|ref|NP_001252929.1| heterogeneous nuclear ribonucleoprotein L [Macaca mulatta]
gi|114676995|ref|XP_512642.2| PREDICTED: heterogeneous nuclear ribonucleoprotein L isoform 6 [Pan
troglodytes]
gi|359318672|ref|XP_003638880.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Canis
lupus familiaris]
gi|402905454|ref|XP_003915534.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L [Papio anubis]
gi|215274006|sp|P14866.2|HNRPL_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein L;
Short=hnRNP L
gi|119577232|gb|EAW56828.1| heterogeneous nuclear ribonucleoprotein L, isoform CRA_c [Homo
sapiens]
gi|306921585|dbj|BAJ17872.1| heterogeneous nuclear ribonucleoprotein L [synthetic construct]
gi|387542466|gb|AFJ71860.1| heterogeneous nuclear ribonucleoprotein L isoform a [Macaca
mulatta]
gi|410298568|gb|JAA27884.1| heterogeneous nuclear ribonucleoprotein L [Pan troglodytes]
Length = 589
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 99 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 156
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 163 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 222
Query: 157 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 216
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 223 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 280
Query: 217 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 261
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 281 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 338
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 3 LTLSLLKVIF------ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDG 56
L ++L I+ + + + G V +I F K G QA+V+F ++A AK +L+G
Sbjct: 195 LLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNG 253
Query: 57 RSIPRYLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
I G CTL+I Y+ T L+V + DYTNP L
Sbjct: 254 ADI-------YSGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPNL 290
>gi|296233743|ref|XP_002807879.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein L [Callithrix jacchus]
Length = 589
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 99 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 156
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 163 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 222
Query: 157 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 216
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 223 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 280
Query: 217 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 261
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 281 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 338
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 3 LTLSLLKVIF------ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDG 56
L ++L I+ + + + G V +I F K G QA+V+F ++A AK +L+G
Sbjct: 195 LLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNG 253
Query: 57 RSIPRYLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
I G CTL+I Y+ T L+V + DYTNP L
Sbjct: 254 ADI-------YSGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPNL 290
>gi|410337383|gb|JAA37638.1| heterogeneous nuclear ribonucleoprotein L [Pan troglodytes]
Length = 589
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 99 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 156
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 163 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 222
Query: 157 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 216
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 223 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 280
Query: 217 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 261
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 281 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 338
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 3 LTLSLLKVIF------ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDG 56
L ++L I+ + + + G V +I F K G QA+V+F ++A AK +L+G
Sbjct: 195 LLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNG 253
Query: 57 RSIPRYLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
I G CTL+I Y+ T L+V + DYTNP L
Sbjct: 254 ADI-------YSGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPNL 290
>gi|348563003|ref|XP_003467298.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L [Cavia
porcellus]
Length = 586
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 99 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 156
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 160 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 219
Query: 157 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 216
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 220 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 277
Query: 217 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 261
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 278 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 335
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 3 LTLSLLKVIF------ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDG 56
L ++L I+ + + + G V +I F K G QA+V+F ++A AK +L+G
Sbjct: 192 LLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNG 250
Query: 57 RSIPRYLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
I G CTL+I Y+ T L+V + DYTNP L
Sbjct: 251 ADI-------YSGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPNL 287
>gi|148692162|gb|EDL24109.1| heterogeneous nuclear ribonucleoprotein L, isoform CRA_b [Mus
musculus]
Length = 567
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 99 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 156
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 141 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 200
Query: 157 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 216
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 201 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 258
Query: 217 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 261
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 259 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 316
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 3 LTLSLLKVIF------ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDG 56
L ++L I+ + + + G V +I F K G QA+V+F ++A AK +L+G
Sbjct: 173 LLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNG 231
Query: 57 RSIPRYLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
I G CTL+I Y+ T L+V + DYTNP L
Sbjct: 232 ADI-------YSGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPNL 268
>gi|183980004|ref|NP_796275.3| heterogeneous nuclear ribonucleoprotein L [Mus musculus]
gi|197927209|ref|NP_116008.2| heterogeneous nuclear ribonucleoprotein L isoform b [Rattus
norvegicus]
gi|215273994|sp|Q8R081.2|HNRPL_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein L;
Short=hnRNP L
gi|71119320|gb|AAH99683.1| Hnrpl protein [Mus musculus]
Length = 586
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 99 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 156
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 160 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 219
Query: 157 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 216
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 220 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 277
Query: 217 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 261
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 278 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 335
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 3 LTLSLLKVIF------ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDG 56
L ++L I+ + + + G V +I F K G QA+V+F ++A AK +L+G
Sbjct: 192 LLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNG 250
Query: 57 RSIPRYLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
I G CTL+I Y+ T L+V + DYTNP L
Sbjct: 251 ADI-------YSGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPNL 287
>gi|291390016|ref|XP_002711505.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L [Oryctolagus
cuniculus]
Length = 586
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 99 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 156
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 160 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 219
Query: 157 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 216
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 220 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 277
Query: 217 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 261
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 278 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 335
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 3 LTLSLLKVIF------ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDG 56
L ++L I+ + + + G V +I F K G QA+V+F ++A AK +L+G
Sbjct: 192 LLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNG 250
Query: 57 RSIPRYLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
I G CTL+I Y+ T L+V + DYTNP L
Sbjct: 251 ADI-------YSGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPNL 287
>gi|11527777|dbj|BAB18649.1| heterogeneous nuclear ribonucleoprotein L [Homo sapiens]
Length = 589
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 99 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 156
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 163 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 222
Query: 157 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 216
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 223 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 280
Query: 217 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 261
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 281 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 338
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 3 LTLSLLKVIF------ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDG 56
L ++L I+ + + + G V +I F K G QA+V+F ++A AK +L+G
Sbjct: 195 LLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNG 253
Query: 57 RSIPRYLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
I G CTL+I Y+ T L+V + DYTNP L
Sbjct: 254 ADI-------YSGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPNL 290
>gi|426388622|ref|XP_004060732.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L [Gorilla
gorilla gorilla]
Length = 589
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 99 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 156
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 163 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 222
Query: 157 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 216
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 223 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 280
Query: 217 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 261
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 281 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 338
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 3 LTLSLLKVIF------ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDG 56
L ++L I+ + + + G V +I F K G QA+V+F ++A AK +L+G
Sbjct: 195 LLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNG 253
Query: 57 RSIPRYLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
I G CTL+I Y+ T L+V + DYTNP L
Sbjct: 254 ADI-------YSGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPNL 290
>gi|380799767|gb|AFE71759.1| heterogeneous nuclear ribonucleoprotein L isoform a, partial
[Macaca mulatta]
Length = 467
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 99 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 156
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 41 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 100
Query: 157 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 216
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 101 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIYS-GCCTLKIEYAKPTRLNVFKNDQ 158
Query: 217 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 261
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 159 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 216
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 3 LTLSLLKVIF------ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDG 56
L ++L I+ + + + G V +I F K G QA+V+F ++A AK +L+G
Sbjct: 73 LLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNG 131
Query: 57 RSIPRYLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
I G CTL+I Y+ T L+V + DYTNP L
Sbjct: 132 ADI-------YSGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPNL 168
>gi|197245939|gb|AAI69048.1| Hnrnpl protein [Rattus norvegicus]
Length = 571
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 99 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 156
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 145 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 204
Query: 157 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 216
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 205 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 262
Query: 217 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 261
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 263 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 320
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 3 LTLSLLKVIF------ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDG 56
L ++L I+ + + + G V +I F K G QA+V+F ++A AK +L+G
Sbjct: 177 LLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNG 235
Query: 57 RSIPRYLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
I G CTL+I Y+ T L+V + DYTNP L
Sbjct: 236 ADI-------YSGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPNL 272
>gi|189053899|dbj|BAG36406.1| unnamed protein product [Homo sapiens]
Length = 558
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 99 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 156
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 132 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 191
Query: 157 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 216
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 192 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 249
Query: 217 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 261
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 250 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 307
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 3 LTLSLLKVIF------ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDG 56
L ++L I+ + + + G V +I F K G QA+V+F ++A AK +L+G
Sbjct: 164 LLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNG 222
Query: 57 RSIPRYLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
I G CTL+I Y+ T L+V + DYTNP L
Sbjct: 223 ADI-------YSGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPNL 259
>gi|426243770|ref|XP_004015721.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L [Ovis aries]
Length = 598
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 99 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 156
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 172 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 231
Query: 157 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 216
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 232 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 289
Query: 217 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 261
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 290 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 347
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 3 LTLSLLKVIF------ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDG 56
L ++L I+ + + + G V +I F K G QA+V+F ++A AK +L+G
Sbjct: 204 LLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNG 262
Query: 57 RSIPRYLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
I G CTL+I Y+ T L+V + DYTNP L
Sbjct: 263 ADI-------YSGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPNL 299
>gi|343959210|dbj|BAK63460.1| heterogeneous nuclear ribonucleoprotein L [Pan troglodytes]
Length = 558
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 99 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 156
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 132 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 191
Query: 157 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 216
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 192 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 249
Query: 217 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 261
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 250 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 307
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 3 LTLSLLKVIF------ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDG 56
L ++L I+ + + + G V +I F K G QA+V+F ++A AK +L+G
Sbjct: 164 LLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNG 222
Query: 57 RSIPRYLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
I G CTL+I Y+ T L+V + DYTNP L
Sbjct: 223 ADI-------YSGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPNL 259
>gi|395859744|ref|XP_003802192.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L [Otolemur
garnettii]
Length = 557
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 99 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 156
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 131 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 190
Query: 157 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 216
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 191 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 248
Query: 217 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 261
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 249 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 306
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 3 LTLSLLKVIF------ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDG 56
L ++L I+ + + + G V +I F K G QA+V+F ++A AK +L+G
Sbjct: 163 LLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNG 221
Query: 57 RSIPRYLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
I G CTL+I Y+ T L+V + DYTNP L
Sbjct: 222 ADI-------YSGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPNL 258
>gi|32356|emb|CAA34261.1| unnamed protein product [Homo sapiens]
gi|226731|prf||1604358A nuclear RNP protein L
Length = 558
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 99 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 156
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 132 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 191
Query: 157 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 216
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 192 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 249
Query: 217 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 261
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 250 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 307
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 3 LTLSLLKVIF------ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDG 56
L ++L I+ + + + G V +I F K G QA+V+F ++A AK +L+G
Sbjct: 164 LLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNG 222
Query: 57 RSIPRYLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
I G CTL+I Y+ T L+V + DYTNP L
Sbjct: 223 ADI-------YSGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPNL 259
>gi|20072624|gb|AAH27206.1| Heterogeneous nuclear ribonucleoprotein L [Mus musculus]
gi|148692161|gb|EDL24108.1| heterogeneous nuclear ribonucleoprotein L, isoform CRA_a [Mus
musculus]
gi|149056440|gb|EDM07871.1| rCG53531, isoform CRA_a [Rattus norvegicus]
Length = 555
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 99 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 156
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 129 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 188
Query: 157 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 216
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 189 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 246
Query: 217 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 261
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 247 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 304
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 3 LTLSLLKVIF------ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDG 56
L ++L I+ + + + G V +I F K G QA+V+F ++A AK +L+G
Sbjct: 161 LLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNG 219
Query: 57 RSIPRYLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
I G CTL+I Y+ T L+V + DYTNP L
Sbjct: 220 ADI-------YSGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPNL 256
>gi|211828181|gb|AAH69184.2| HNRNPL protein [Homo sapiens]
Length = 572
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 99 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 156
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 146 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 205
Query: 157 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 216
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 206 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 263
Query: 217 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 261
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 264 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 321
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 3 LTLSLLKVIF------ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDG 56
L ++L I+ + + + G V +I F K G QA+V+F ++A AK +L+G
Sbjct: 178 LLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNG 236
Query: 57 RSIPRYLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
I G CTL+I Y+ T L+V + DYTNP L
Sbjct: 237 ADI-------YSGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPNL 273
>gi|428170649|gb|EKX39572.1| hypothetical protein GUITHDRAFT_114298 [Guillardia theta CCMP2712]
Length = 580
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 104/220 (47%), Gaps = 32/220 (14%)
Query: 18 SAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITY 77
S FG V ++ F + QA V+F E SA+ + S+P +G + Y
Sbjct: 31 SRFGEVRRV--FHLSRKHQAFVEFVSLE--DSARMLAECESVP-----IRVGTRVIVAQY 81
Query: 78 SAHTDLSVKFQSHRSRDYTNP--YLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 135
S T+LS + + + + V P++ ++ +LL ++ N
Sbjct: 82 SNKTELSPPTREYEGEGFVRERSWNAVPPNS------------------DARILLVTVTN 123
Query: 136 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 195
+ Y V +DV++ VFS G ++KI +F+K G QAL+Q+ A A + G IY+G
Sbjct: 124 VVYKVDVDVMYQVFSMMGTIEKIVIFNKQGKTQALVQFERPADAQAALDRFNGLNIYNG- 182
Query: 196 FC-KLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPS 234
C L I +S D+++K NN+RS D+T P+ P N S
Sbjct: 183 -CNNLQIGFSNLLDITVKYNNERSYDFTNPNLPAGNPNES 221
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 63/128 (49%), Gaps = 8/128 (6%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + QVFS G + KI F K QALVQF A +A + +G +I
Sbjct: 128 VDVDVMYQVFSMMGTIEKIVIFNKQGKTQALVQFERPADAQAALDRFNGLNIYN------ 181
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVA-PSAIDASGQLSVGLDGKKLEPES 126
G L+I +S D++VK+ + RS D+TNP LP P+ A +DG+ +S
Sbjct: 182 -GCNNLQIGFSNLLDITVKYNNERSYDFTNPNLPAGNPNESPADRYDMRPIDGRPPASQS 240
Query: 127 NVLLASIE 134
N A+I+
Sbjct: 241 NWSAAAID 248
>gi|194215401|ref|XP_001496787.2| PREDICTED: heterogeneous nuclear ribonucleoprotein L [Equus
caballus]
Length = 509
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 99 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 156
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 83 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 142
Query: 157 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 216
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 143 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFRNDQ 200
Query: 217 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 261
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 201 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 258
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 21 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 80
G V +I F K G QA+V+F ++A AK +L+G I G CTL+I Y+
Sbjct: 139 GPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADI-------YSGCCTLKIEYAKP 190
Query: 81 TDLSVKFQSHRSRDYTNPYL 100
T L+V + DYTNP L
Sbjct: 191 TRLNVFRNDQDTWDYTNPNL 210
>gi|119577230|gb|EAW56826.1| heterogeneous nuclear ribonucleoprotein L, isoform CRA_a [Homo
sapiens]
Length = 557
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 99 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 156
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 131 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 190
Query: 157 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 216
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 191 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 248
Query: 217 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 261
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 249 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 306
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 3 LTLSLLKVIF------ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDG 56
L ++L I+ + + + G V +I F K G QA+V+F ++A AK +L+G
Sbjct: 163 LLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNG 221
Query: 57 RSIPRYLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
I G CTL+I Y+ T L+V + DYTNP L
Sbjct: 222 ADI-------YSGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPNL 258
>gi|395522271|ref|XP_003765161.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L [Sarcophilus
harrisii]
Length = 510
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 99 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 156
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 84 YIAGHPAFVNYSTSQKISRPGDTDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 143
Query: 157 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 216
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 144 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 201
Query: 217 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 261
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 202 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 259
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 21 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 80
G V +I F K G QA+V+F ++A AK +L+G I G CTL+I Y+
Sbjct: 140 GPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADI-------YSGCCTLKIEYAKP 191
Query: 81 TDLSVKFQSHRSRDYTNPYL 100
T L+V + DYTNP L
Sbjct: 192 TRLNVFKNDQDTWDYTNPNL 211
>gi|397507212|ref|XP_003824099.1| PREDICTED: LOW QUALITY PROTEIN: polypyrimidine tract-binding
protein 1-like [Pan paniscus]
Length = 541
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 92/172 (53%), Gaps = 18/172 (10%)
Query: 73 LRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDA--SGQLS-----VGLD-GKKLEP 124
+ I +S H L +++RD P A A+++ SG L+ +D G +
Sbjct: 126 IYIQFSNHKGLKTDSSPNQARD------PAAXQAVNSVQSGNLAWTAPEAAVDAGMGMAG 179
Query: 125 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 184
+S VL +EN+ Y +TLDVLH +FS FG V+ I F K+ QAL+QY D + A K
Sbjct: 180 QSPVLRIIVENLFYPMTLDVLHQIFSKFGTVKTIT-FIKDNQFQALLQYTDPENAQHTKL 238
Query: 185 ALEGHCIYDGGFC-KLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
+L+ Y+ C L I +S+ L++K +ND+SRDY P P +S PS+
Sbjct: 239 SLDWQNTYNA--CHTLCIDFSKLISLNVKYSNDKSRDYXRPDLPSGDSXPSL 288
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPC-TL 73
Q+FS FG V K TF K FQAL+Q++D E A K +LD ++ C TL
Sbjct: 202 QIFSKFGTV-KTITFIKDNQFQALLQYTDPENAQHTKLSLDWQN--------TYNACHTL 252
Query: 74 RITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLD 118
I +S L+VK+ + +SRDY P LP S ++V D
Sbjct: 253 CIDFSKLISLNVKYSNDKSRDYXRPDLPSGDSXPSLDQXMAVAFD 297
>gi|126329101|ref|XP_001362792.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L [Monodelphis
domestica]
Length = 607
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 99 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 156
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 181 YIAGHPAFVNYSTSQKISRPGDTDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 240
Query: 157 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 216
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 241 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 298
Query: 217 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 261
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 299 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 356
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 3 LTLSLLKVIF------ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDG 56
L ++L I+ + + + G V +I F K G QA+V+F ++A AK +L+G
Sbjct: 213 LLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNG 271
Query: 57 RSIPRYLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
I G CTL+I Y+ T L+V + DYTNP L
Sbjct: 272 ADI-------YSGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPNL 308
>gi|449267533|gb|EMC78469.1| Regulator of differentiation 1, partial [Columba livia]
Length = 499
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 73/131 (55%), Gaps = 7/131 (5%)
Query: 128 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 187
VL ++N+ + ++L++LH + S FGPV +I +F K G QAL +Y + ++A AK+ L
Sbjct: 136 VLRIIVDNVSHHISLEMLHEILSPFGPVLRIIIFTKYGKFQALAEYDNPRSAYCAKKTLN 195
Query: 188 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGAT 247
G I+ C + + YS+ T L+IK NN++SRD+T P + Q I QP+
Sbjct: 196 GQGIFTSD-CFIRVDYSKFTSLAIKYNNEKSRDFTRLDLPSGDGQ--IYMDQPIAAAYGI 252
Query: 248 ANQ----YNGA 254
N Y GA
Sbjct: 253 QNNIVPSYTGA 263
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 99/237 (41%), Gaps = 57/237 (24%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
++ S FG V +I F K FQAL ++ + +A AK L+G+ I C +R
Sbjct: 155 EILSPFGPVLRIIIFTKYGKFQALAEYDNPRSAYCAKKTLNGQGI-------FTSDCFIR 207
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLP---------------------VAPSAIDASG-- 111
+ YS T L++K+ + +SRD+T LP + PS A+G
Sbjct: 208 VDYSKFTSLAIKYNNEKSRDFTRLDLPSGDGQIYMDQPIAAAYGIQNNIVPSYTGAAGFT 267
Query: 112 -QLSVGLDGKKLEP---------------------ESNVLLASIENMQYAVTLDVLHMVF 149
+S L P E++VLL S N AVT L ++F
Sbjct: 268 PNMSFSQGAGSLVPPLPTAVRSLAPPGQRTYPDFSENSVLLVSNLNPN-AVTPYGLFILF 326
Query: 150 SAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRH 206
+G V ++ + + +AL+Q D A +A L G +Y LH ++S+H
Sbjct: 327 GIYGNVHRVKIMFRTKE-KALVQMADANQARLAISYLNGQKLYGR---VLHATFSKH 379
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 89/201 (44%), Gaps = 28/201 (13%)
Query: 11 IFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGP 70
+FIL F +G VH++ +T +ALVQ +D A A + L+G + +
Sbjct: 322 LFIL--FGIYGNVHRVKIMFRTKE-KALVQMADANQARLAISYLNG---------QKLYG 369
Query: 71 CTLRITYSAHTDLSV----KFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPES 126
L T+S H + + + ++DY+N P+ I S + + P S
Sbjct: 370 RVLHATFSKHHTVQLLRGGRDDQGLTKDYSNS--PLHRFKIPGSKNF------QNIFPPS 421
Query: 127 NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEAL 186
L + N+ VT+D + +F++ G K F +N ALIQ V+ AV A L
Sbjct: 422 ATL--HLSNIPSCVTVDDMKNLFASTGCTVKACRFFRNNCRTALIQLGSVEEAVHALIEL 479
Query: 187 EGHCIYDGGFCKLHISYSRHT 207
H + G L +S+++HT
Sbjct: 480 HNHDL--GQNRTLRVSFAKHT 498
>gi|66820074|ref|XP_643683.1| hypothetical protein DDB_G0275365 [Dictyostelium discoideum AX4]
gi|60471793|gb|EAL69748.1| hypothetical protein DDB_G0275365 [Dictyostelium discoideum AX4]
Length = 695
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 69/104 (66%), Gaps = 3/104 (2%)
Query: 128 VLLASIEN-MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEAL 186
VLL++IEN ++T+D L+ VFS+ G V +I MF+KN LQALI++ V++A+ AK+ L
Sbjct: 156 VLLSTIENPGSNSITIDHLYHVFSSCGEVLRIVMFNKNN-LQALIEFSTVESALHAKKTL 214
Query: 187 EGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVN 230
H ++ GG C L + S+ L+I N DR++D++ S P VN
Sbjct: 215 SNHSLFHGGQCTLKLEVSKTDRLNITQNTDRAKDFS-KSLPTVN 257
Score = 43.9 bits (102), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCT 72
+ VFS+ G V +I F K QAL++FS E+A AK L S+ G CT
Sbjct: 174 LYHVFSSCGEVLRIVMFNKN-NLQALIEFSTVESALHAKKTLSNHSLFH------GGQCT 226
Query: 73 LRITYSAHTDLSVKFQSHRSRDYT 96
L++ S L++ + R++D++
Sbjct: 227 LKLEVSKTDRLNITQNTDRAKDFS 250
>gi|330801720|ref|XP_003288872.1| hypothetical protein DICPUDRAFT_55687 [Dictyostelium purpureum]
gi|325081065|gb|EGC34595.1| hypothetical protein DICPUDRAFT_55687 [Dictyostelium purpureum]
Length = 663
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 63/96 (65%), Gaps = 2/96 (2%)
Query: 128 VLLASIENM-QYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEAL 186
VLL +IE+ +++T+D L+ FS+ G V +I MF KN LQALI++ V A+ AK+ L
Sbjct: 177 VLLCTIESQANHSITIDHLYHAFSSCGEVLRIVMFTKNN-LQALIEFSSVDNALNAKKTL 235
Query: 187 EGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 222
GH ++ GG CKL + S+ L+I N DR++DYT
Sbjct: 236 FGHALFHGGQCKLKLEISKTDRLNITQNTDRAKDYT 271
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ + + FS+ G V +I F K QAL++FS + A +AK L G ++ +
Sbjct: 190 ITIDHLYHAFSSCGEVLRIVMFTKN-NLQALIEFSSVDNALNAKKTLFGHAL------FH 242
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYT 96
G C L++ S L++ + R++DYT
Sbjct: 243 GGQCKLKLEISKTDRLNITQNTDRAKDYT 271
>gi|67971924|dbj|BAE02304.1| unnamed protein product [Macaca fascicularis]
Length = 456
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 99 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 156
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 30 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 89
Query: 157 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 216
I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 90 GIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIYS-GCCTLKIEYAKPTRLNVFKNDQ 147
Query: 217 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 261
+ DYT P+ P N QP +LG +P G + Y+ + PPPP
Sbjct: 148 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDRPAEYGGPHGGYHSHYHDEGYGPPPP 205
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 50/104 (48%), Gaps = 14/104 (13%)
Query: 3 LTLSLLKVIF------ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDG 56
L ++L I+ + + + G V I F K G QA+V+F ++A AK +L+G
Sbjct: 62 LLFTILNPIYSITTDVLYTICNPCGPVQGIVIFRKN-GVQAMVEFDSVQSAQRAKASLNG 120
Query: 57 RSIPRYLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
I G CTL+I Y+ T L+V + DYTNP L
Sbjct: 121 ADI-------YSGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPNL 157
>gi|325187058|emb|CCA21600.1| polypyrimidine tractbinding protein putative [Albugo laibachii
Nc14]
Length = 614
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 114/248 (45%), Gaps = 35/248 (14%)
Query: 36 QALVQFSDTETASSAKNALDGR-SIPR----YLLPENMGPCTLRITYSAHTDLSVKFQSH 90
QA VQ D +A++ N R ++ R + N T R + D SV+ Q H
Sbjct: 69 QAFVQLPDVSSATNLINFYQTRDAMIRGARIFFEYSNRSEITTRAGF--QDDSSVE-QHH 125
Query: 91 RSR------------DYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQY 138
R DY N V + SG + G G P + +L+ ++ ++Y
Sbjct: 126 TQRSNRPTTRQEQPADYDN----VLRNQHSRSGNGASGRRGYAGAPNT-ILMVTVTKIEY 180
Query: 139 AVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCK 198
VT+DVL VF FG VQK+ F KN +AL+Q + A A++AL+G IY G C
Sbjct: 181 DVTVDVLQQVFQKFGNVQKVVTFWKNEEFKALVQMESIDQAQAAQQALDGRDIYTG--CN 238
Query: 199 -LHISYSRHTDLSIKVNNDRSRDYT---LPSTPMVNSQPSILGQQPVPMVGATAN----Q 250
L I +SRH +L ++ NNDRS DY LP P +S + + PM G + Q
Sbjct: 239 TLGIVFSRHPELRVRFNNDRSWDYMNPGLPPGPSADSSGPEMNYEEGPMPGMLGDVPNAQ 298
Query: 251 YNGAQFAP 258
G+ + P
Sbjct: 299 GRGSTYGP 306
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 59/104 (56%), Gaps = 8/104 (7%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + QVF FG V K+ TF K F+ALVQ + A +A+ ALDGR I
Sbjct: 182 VTVDVLQQVFQKFGNVQKVVTFWKNEEFKALVQMESIDQAQAAQQALDGRDI-------Y 234
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASG 111
G TL I +S H +L V+F + RS DY NP LP PSA D+SG
Sbjct: 235 TGCNTLGIVFSRHPELRVRFNNDRSWDYMNPGLPPGPSA-DSSG 277
>gi|41055393|ref|NP_957393.1| heterogeneous nuclear ribonucleoprotein L [Danio rerio]
gi|28278846|gb|AAH45336.1| Zgc:55429 [Danio rerio]
gi|182890552|gb|AAI64693.1| Zgc:55429 protein [Danio rerio]
Length = 536
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 101/215 (46%), Gaps = 45/215 (20%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCT 72
+++ FG + + K QALV+F D AS+A
Sbjct: 57 LVEALQEFGTISYVVLMPKKR--QALVEFEDMNGASNA---------------------- 92
Query: 73 LRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID--ASGQLSVGLDGKKLEPESNVLL 130
+TY+ + + Y+ PS I+ S ++S D +NVLL
Sbjct: 93 --VTYANNNQI---------------YIAGRPSYINYSTSQKISRPTDSDDTRSVNNVLL 135
Query: 131 ASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHC 190
+I N Y +T DVL+ + + GPVQ+I +F KN G+QA++++ VQ+A AK +L G
Sbjct: 136 LTIMNPIYPITSDVLYTICNNCGPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGAD 194
Query: 191 IYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 225
IY G C L I Y++ T L++ N+ + DYT P+
Sbjct: 195 IY-SGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPN 228
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 58/122 (47%), Gaps = 16/122 (13%)
Query: 3 LTLSLLKVIF------ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDG 56
L L+++ I+ + + + G V +I F K G QA+V+F ++A AK +L+G
Sbjct: 134 LLLTIMNPIYPITSDVLYTICNNCGPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNG 192
Query: 57 RSIPRYLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVG 116
I G CTL+I Y+ T L+V + DYTNP L + DA G +
Sbjct: 193 ADIYS-------GCCTLKIEYAKPTRLNVFKNDQDTWDYTNPNL--SGQDADADGNWNNS 243
Query: 117 LD 118
D
Sbjct: 244 QD 245
>gi|395846042|ref|XP_003795724.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Otolemur
garnettii]
Length = 536
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 98/194 (50%), Gaps = 22/194 (11%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 160 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 218
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 245
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 219 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 274
Query: 246 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 295
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 275 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 327
Query: 296 GSMPMGPGMMQMHM 309
GS+ M G+ Q+ M
Sbjct: 328 GSVVMVSGLHQLKM 341
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + V + G V +I F++ G QA+V+F A AK AL+G I
Sbjct: 174 ITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAALNGADI-------Y 225
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
G CTL+I Y+ T L+V + S DYT PYL
Sbjct: 226 AGCCTLKIEYARPTRLNVIRNDNDSWDYTKPYL 258
>gi|66816231|ref|XP_642125.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|60470245|gb|EAL68225.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 530
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 62/96 (64%), Gaps = 1/96 (1%)
Query: 127 NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEAL 186
N++L +I N Y +T + +H + S +G V +I +F K GLQ +++ +A AKE+L
Sbjct: 135 NIILCTILNPIYPITTNTIHNIMSPYGRVIRIVIFQKKSGLQTFVEFDSPYSAWAAKESL 194
Query: 187 EGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 222
G IY+GG CKL I ++R + L++K N+D++ DYT
Sbjct: 195 NGQDIYNGG-CKLQIEFARVSKLNVKQNDDKTADYT 229
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCT 72
I + S +G V +I F+K +G Q V+F +A +AK +L+G+ I G C
Sbjct: 153 IHNIMSPYGRVIRIVIFQKKSGLQTFVEFDSPYSAWAAKESLNGQDIYN-------GGCK 205
Query: 73 LRITYSAHTDLSVKFQSHRSRDYTNPY 99
L+I ++ + L+VK ++ DYT +
Sbjct: 206 LQIEFARVSKLNVKQNDDKTADYTAEF 232
>gi|158257950|dbj|BAF84948.1| unnamed protein product [Homo sapiens]
Length = 537
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 98/194 (50%), Gaps = 22/194 (11%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 161 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 219
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 245
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 220 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 275
Query: 246 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 295
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 276 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 328
Query: 296 GSMPMGPGMMQMHM 309
GS+ M G+ Q+ M
Sbjct: 329 GSVVMVSGLHQLKM 342
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + V + G V +I F++ G QA+V+F A AK AL+G I
Sbjct: 175 ITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAALNGADI-------Y 226
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
G CTL+I Y+ T L+V + S DYT PYL
Sbjct: 227 AGCCTLKIEYARPTRLNVIRNDNDSWDYTKPYL 259
>gi|217416379|ref|NP_001136122.1| heterogeneous nuclear ribonucleoprotein L-like isoform 2 [Homo
sapiens]
gi|25988649|gb|AAN76189.1| BLOCK24 variant [Homo sapiens]
gi|67005958|gb|AAQ20084.2| stromal RNA regulating factor [Homo sapiens]
gi|383409737|gb|AFH28082.1| heterogeneous nuclear ribonucleoprotein L-like isoform 2 [Macaca
mulatta]
gi|384950354|gb|AFI38782.1| heterogeneous nuclear ribonucleoprotein L-like isoform 2 [Macaca
mulatta]
gi|410214348|gb|JAA04393.1| heterogeneous nuclear ribonucleoprotein L-like [Pan troglodytes]
gi|410289228|gb|JAA23214.1| heterogeneous nuclear ribonucleoprotein L-like [Pan troglodytes]
Length = 537
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 98/194 (50%), Gaps = 22/194 (11%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 161 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 219
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 245
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 220 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 275
Query: 246 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 295
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 276 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 328
Query: 296 GSMPMGPGMMQMHM 309
GS+ M G+ Q+ M
Sbjct: 329 GSVVMVSGLHQLKM 342
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + V + G V +I F++ G QA+V+F A AK AL+G I
Sbjct: 175 ITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAALNGADI-------Y 226
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
G CTL+I Y+ T L+V + S DYT PYL
Sbjct: 227 AGCCTLKIEYARPTRLNVIRNDNDSWDYTKPYL 259
>gi|313228979|emb|CBY18131.1| unnamed protein product [Oikopleura dioica]
Length = 409
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 79/152 (51%), Gaps = 16/152 (10%)
Query: 123 EPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVA 182
+ E N++L +I N Y +T VLH + FG +++I +F K LQA+I++ D++ A+ A
Sbjct: 33 QKEHNIVLLTIRNPFYPITTSVLHKAAARFGDIKRIVIFKKK-FLQAMIEFSDIKMAIQA 91
Query: 183 KEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPS-ILGQQPV 241
K L G IY G C + Y+R L++ N+D + DY++ S V +P +LG +P+
Sbjct: 92 KAGLHGQDIY-SGCCSIKCEYARTEKLNVYKNDDTTWDYSVSSQGQVQKKPCGLLGDRPI 150
Query: 242 PMVGATANQ-------------YNGAQFAPPP 260
GA N YN A PPP
Sbjct: 151 IPNGAPFNAERESVPPQVPFPVYNDAHGYPPP 182
>gi|348524681|ref|XP_003449851.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 1
[Oreochromis niloticus]
Length = 529
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 92/188 (48%), Gaps = 27/188 (14%)
Query: 99 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 156
Y+ P+ I+ S + G + S NVLL +I N Y +T DVL+ + + GPVQ
Sbjct: 102 YIAGHPAFINYSTSQKISRPGDSDDTRSVNNVLLLTIINPIYPITTDVLYTICNNCGPVQ 161
Query: 157 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 216
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ L++ N+
Sbjct: 162 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPARLNVFKNDQ 219
Query: 217 RSRDYTLPS----------------TPMVN-----SQPSILGQQPVPMVGATA--NQYNG 253
+ DYT P+ P N QP++LG P G + YN
Sbjct: 220 DTWDYTNPNLSGQDADGEGNWNNSQDPNANPNKRQRQPALLGDHPPDYGGPQGGYHGYND 279
Query: 254 AQFAPPPP 261
+ PPPP
Sbjct: 280 DSYGPPPP 287
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 56/116 (48%), Gaps = 18/116 (15%)
Query: 3 LTLSLLKVIF------ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDG 56
L L+++ I+ + + + G V +I F K G QA+V+F ++A AK +L+G
Sbjct: 134 LLLTIINPIYPITTDVLYTICNNCGPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNG 192
Query: 57 RSIPRYLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQ 112
I G CTL+I Y+ L+V + DYTNP L S DA G+
Sbjct: 193 ADIYS-------GCCTLKIEYAKPARLNVFKNDQDTWDYTNPNL----SGQDADGE 237
>gi|116004021|ref|NP_001070368.1| heterogeneous nuclear ribonucleoprotein L-like [Bos taurus]
gi|115305250|gb|AAI23452.1| Heterogeneous nuclear ribonucleoprotein L-like [Bos taurus]
gi|296482596|tpg|DAA24711.1| TPA: heterogeneous nuclear ribonucleoprotein L-like [Bos taurus]
Length = 541
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 98/194 (50%), Gaps = 22/194 (11%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 165 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 223
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 245
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 224 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 279
Query: 246 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 295
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 280 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 332
Query: 296 GSMPMGPGMMQMHM 309
GS+ M G+ Q+ M
Sbjct: 333 GSVVMVSGLHQLKM 346
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + V + G V +I F++ G QA+V+F A AK AL+G I
Sbjct: 179 ITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAALNGADI-------Y 230
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
G CTL+I Y+ T L+V + S DYT PYL
Sbjct: 231 AGCCTLKIEYARPTRLNVIRNDNDSWDYTKPYL 263
>gi|20149709|ref|NP_612403.2| heterogeneous nuclear ribonucleoprotein L-like isoform 1 [Homo
sapiens]
gi|62286941|sp|Q8WVV9.1|HNRLL_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein L-like;
Short=hnRNPLL; AltName: Full=Stromal RNA-regulating
factor
gi|17028350|gb|AAH17480.1| Heterogeneous nuclear ribonucleoprotein L-like [Homo sapiens]
gi|62988915|gb|AAY24302.1| unknown [Homo sapiens]
gi|158256360|dbj|BAF84151.1| unnamed protein product [Homo sapiens]
gi|380784945|gb|AFE64348.1| heterogeneous nuclear ribonucleoprotein L-like isoform 1 [Macaca
mulatta]
gi|383409735|gb|AFH28081.1| heterogeneous nuclear ribonucleoprotein L-like isoform 1 [Macaca
mulatta]
gi|410214350|gb|JAA04394.1| heterogeneous nuclear ribonucleoprotein L-like [Pan troglodytes]
gi|410253266|gb|JAA14600.1| heterogeneous nuclear ribonucleoprotein L-like [Pan troglodytes]
gi|410289230|gb|JAA23215.1| heterogeneous nuclear ribonucleoprotein L-like [Pan troglodytes]
gi|410329931|gb|JAA33912.1| heterogeneous nuclear ribonucleoprotein L-like [Pan troglodytes]
Length = 542
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 98/194 (50%), Gaps = 22/194 (11%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 166 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 224
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 245
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 225 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 280
Query: 246 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 295
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 281 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 333
Query: 296 GSMPMGPGMMQMHM 309
GS+ M G+ Q+ M
Sbjct: 334 GSVVMVSGLHQLKM 347
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + V + G V +I F++ G QA+V+F A AK AL+G I
Sbjct: 180 ITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAALNGADI-------Y 231
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
G CTL+I Y+ T L+V + S DYT PYL
Sbjct: 232 AGCCTLKIEYARPTRLNVIRNDNDSWDYTKPYL 264
>gi|359321615|ref|XP_003639639.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Canis
lupus familiaris]
Length = 545
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 98/194 (50%), Gaps = 22/194 (11%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 169 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 227
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 245
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 228 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 283
Query: 246 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 295
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 284 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 336
Query: 296 GSMPMGPGMMQMHM 309
GS+ M G+ Q+ M
Sbjct: 337 GSVVMVSGLHQLKM 350
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + V + G V +I F++ G QA+V+F A AK AL+G I
Sbjct: 183 ITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAALNGADI-------Y 234
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
G CTL+I Y+ T L+V + S DYT PYL
Sbjct: 235 AGCCTLKIEYARPTRLNVIRNDNDSWDYTKPYL 267
>gi|334313145|ref|XP_001365024.2| PREDICTED: heterogeneous nuclear ribonucleoprotein L [Monodelphis
domestica]
Length = 538
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 98/194 (50%), Gaps = 22/194 (11%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 162 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 220
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 245
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 221 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 276
Query: 246 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 295
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 277 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 329
Query: 296 GSMPMGPGMMQMHM 309
GS+ M G+ Q+ M
Sbjct: 330 GSVVMVSGLHQLKM 343
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + V + G V +I F++ G QA+V+F A AK AL+G I
Sbjct: 176 ITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAALNGADI-------Y 227
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
G CTL+I Y+ T L+V + S DYT PYL
Sbjct: 228 AGCCTLKIEYARPTRLNVIRNDNDSWDYTKPYL 260
>gi|390474560|ref|XP_002757889.2| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 3
[Callithrix jacchus]
Length = 543
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 98/194 (50%), Gaps = 22/194 (11%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 167 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 225
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 245
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 226 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 281
Query: 246 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 295
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 282 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 334
Query: 296 GSMPMGPGMMQMHM 309
GS+ M G+ Q+ M
Sbjct: 335 GSVVMVSGLHQLKM 348
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + V + G V +I F++ G QA+V+F A AK AL+G I
Sbjct: 181 ITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAALNGADI-------Y 232
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
G CTL+I Y+ T L+V + S DYT PYL
Sbjct: 233 AGCCTLKIEYARPTRLNVIRNDNDSWDYTKPYL 265
>gi|158254346|gb|AAI54329.1| Hnrnpl protein [Danio rerio]
Length = 522
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 74/117 (63%), Gaps = 4/117 (3%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+NVLL +I N Y +T DVL+ + + GPVQ+I +F KN G+QA++++ VQ+A AK +
Sbjct: 132 NNVLLLTIMNPIYPITSDVLYTICNNCGPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKAS 190
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS--TPMVNSQPSILGQQP 240
L G IY G C L I Y++ T L++ N+ + DYT PS T +N+ P+ +QP
Sbjct: 191 LNGADIY-SGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPSLGTQDMNANPNKRQRQP 246
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 52/104 (50%), Gaps = 14/104 (13%)
Query: 3 LTLSLLKVIF------ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDG 56
L L+++ I+ + + + G V +I F K G QA+V+F ++A AK +L+G
Sbjct: 135 LLLTIMNPIYPITSDVLYTICNNCGPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNG 193
Query: 57 RSIPRYLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
I G CTL+I Y+ T L+V + DYTNP L
Sbjct: 194 ADIYS-------GCCTLKIEYAKPTRLNVFKNDQDTWDYTNPSL 230
>gi|395508191|ref|XP_003758397.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like
[Sarcophilus harrisii]
Length = 500
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 98/194 (50%), Gaps = 22/194 (11%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 124 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 182
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 245
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 183 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 238
Query: 246 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 295
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 239 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 291
Query: 296 GSMPMGPGMMQMHM 309
GS+ M G+ Q+ M
Sbjct: 292 GSVVMVSGLHQLKM 305
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + V + G V +I F++ G QA+V+F A AK AL+G I
Sbjct: 138 ITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAALNGADI-------Y 189
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
G CTL+I Y+ T L+V + S DYT PYL
Sbjct: 190 AGCCTLKIEYARPTRLNVIRNDNDSWDYTKPYL 222
>gi|355694958|gb|AER99845.1| heteroproteinous nuclear ribonucleoprotein L-like protein [Mustela
putorius furo]
Length = 380
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 98/194 (50%), Gaps = 22/194 (11%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 5 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 63
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 245
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 64 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 119
Query: 246 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 295
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 120 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 172
Query: 296 GSMPMGPGMMQMHM 309
GS+ M G+ Q+ M
Sbjct: 173 GSVVMVSGLHQLKM 186
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + V + G V +I F++ G QA+V+F A AK AL+G I
Sbjct: 19 ITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAALNGADI-------Y 70
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
G CTL+I Y+ T L+V + S DYT PYL
Sbjct: 71 AGCCTLKIEYARPTRLNVIRNDNDSWDYTKPYL 103
>gi|335775957|gb|AEH58745.1| heterogeneous nuclear ribonucleoprotein L-lik-like protein [Equus
caballus]
Length = 424
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 98/194 (50%), Gaps = 22/194 (11%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 48 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 106
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 245
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 107 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 162
Query: 246 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 295
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 163 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 215
Query: 296 GSMPMGPGMMQMHM 309
GS+ M G+ Q+ M
Sbjct: 216 GSVVMVSGLHQLKM 229
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + V + G V +I F++ G QA+V+F A AK AL+G I
Sbjct: 62 ITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAALNGADI-------Y 113
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
G CTL+I Y+ T L+V + S DYT PYL
Sbjct: 114 AGCCTLKIEYARPTRLNVIRNDNDSWDYTKPYL 146
>gi|410978917|ref|XP_003995834.1| PREDICTED: polypyrimidine tract-binding protein 3 [Felis catus]
Length = 540
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 86/175 (49%), Gaps = 28/175 (16%)
Query: 148 VFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHT 207
+FS FG V KI F KN QAL+QY D A AK AL+G IY+ C L I +S+ T
Sbjct: 189 IFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYN-ACCTLRIDFSKLT 247
Query: 208 DLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMV------GATANQYNGAQ-FAPPP 260
L++K NND+SRD+T P + QPS+ +P PM G ++ Y GA FAP
Sbjct: 248 SLNVKYNNDKSRDFTRLDLPTGDGQPSL---EP-PMAAAFGAPGIISSPYAGAAGFAPAI 303
Query: 261 PEQPMMHQPTAAGWGAVPPASQSMPMMGNHPYMPPGSMPMGPGMMQMHMPGQSGM 315
HQ T AVP A + P ++ +M +PG SG+
Sbjct: 304 G----FHQATGISVPAVPGA------------LGPLTITSSAVTGRMAIPGTSGV 342
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 52/88 (59%), Gaps = 7/88 (7%)
Query: 16 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 75
+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLRI
Sbjct: 189 IFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYN-------ACCTLRI 241
Query: 76 TYSAHTDLSVKFQSHRSRDYTNPYLPVA 103
+S T L+VK+ + +SRD+T LP
Sbjct: 242 DFSKLTSLNVKYNNDKSRDFTRLDLPTG 269
Score = 38.1 bits (87), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 81/198 (40%), Gaps = 22/198 (11%)
Query: 11 IFILQVFSAFGFVHKITT-FEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMG 69
+FIL F +G VH++ F K ALVQ +D A A N L G+ + +L
Sbjct: 363 LFIL--FGVYGDVHRVKIMFNKKE--NALVQMADASQAQLAMNHLSGQRLYGKVL----- 413
Query: 70 PCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVL 129
R T S H + + + + T + G + + + P S L
Sbjct: 414 ----RATLSKHQAVQLPREGQEDQGLTKDFSNSPLHRFKKPGSKNF----QNIFPPSATL 465
Query: 130 LASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGH 189
+ N+ +VT+D L +F+ G K F + ALIQ V+ A+ A L H
Sbjct: 466 --HLSNIPPSVTVDDLKNLFTEAGCSVKAFKFFQKDRKMALIQLGSVEEAIQALIELHNH 523
Query: 190 CIYDGGFCKLHISYSRHT 207
+ G L +S+S+ T
Sbjct: 524 DL--GENHHLRVSFSKST 539
>gi|344288860|ref|XP_003416164.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L [Loxodonta
africana]
Length = 489
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 98/194 (50%), Gaps = 22/194 (11%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 113 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 171
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 245
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 172 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 227
Query: 246 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 295
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 228 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 280
Query: 296 GSMPMGPGMMQMHM 309
GS+ M G+ Q+ M
Sbjct: 281 GSVVMVSGLHQLKM 294
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + V + G V +I F++ G QA+V+F A AK AL+G I
Sbjct: 127 ITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAALNGADI-------Y 178
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
G CTL+I Y+ T L+V + S DYT PYL
Sbjct: 179 AGCCTLKIEYARPTRLNVIRNDNDSWDYTKPYL 211
>gi|351706875|gb|EHB09794.1| Polypyrimidine tract-binding protein 1 [Heterocephalus glaber]
Length = 543
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 62/101 (61%), Gaps = 1/101 (0%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 174 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNSQFQALLQYADPVS 233
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSR 219
A A+ +L+ IY+ C L I +S+ T L++K N D+SR
Sbjct: 234 AQHARLSLDRQNIYN-TCCTLSIDFSKLTSLNVKYNYDKSR 273
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 103/219 (47%), Gaps = 37/219 (16%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V KI TF K + FQAL+Q++D +A A+ +LD ++I CTL
Sbjct: 202 QIFSKFGTVLKIITFTKNSQFQALLQYADPVSAQHARLSLDRQNIYNTC-------CTLS 254
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDAS-----GQL---------------- 113
I +S T L+VK+ +SR P + P A S G L
Sbjct: 255 IDFSKLTSLNVKYNYDKSRAGFPPTFDI-PQAAGLSVPKVHGALAPLAIPSAAAAAAVAG 313
Query: 114 SVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA-MFDKNGGLQALIQ 172
+G+ G S VLL S N + VT L ++F G VQ++ +F+K AL+Q
Sbjct: 314 RIGIPGLGAAGNS-VLLVSNLNPER-VTPQSLFILFGVHGDVQRVKILFNKKE--NALVQ 369
Query: 173 YPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 211
D A +A L+GH ++ + I+ S+H ++ +
Sbjct: 370 MADGSRAQLAMSHLDGHKLHGK---PIRITLSKHQNVQL 405
>gi|410910584|ref|XP_003968770.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein L-like [Takifugu rubripes]
Length = 514
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 89/161 (55%), Gaps = 8/161 (4%)
Query: 99 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 156
Y+ P+ I+ S + G + S NVLL +I N Y +T DVL+ + + GPVQ
Sbjct: 99 YIAGHPAFINYSTSQKISRPGDSDDSRSVNNVLLFTIMNPIYPITTDVLYTICNNCGPVQ 158
Query: 157 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 216
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 159 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 216
Query: 217 RSRDYTLPST---PMVNSQPSILGQQPVPMVGATANQYNGA 254
+ DYT P+ VN+ P+ +QP ++G +Y G
Sbjct: 217 ETWDYTNPNLGGPEDVNANPNKRQRQPA-LLGDHPPEYGGG 256
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 9/90 (10%)
Query: 21 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 80
G V +I F K G QA+V+F ++A AK +L+G I G CTL+I Y+
Sbjct: 155 GPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIYS-------GCCTLKIEYAKP 206
Query: 81 TDLSVKFQSHRSRDYTNPYLPVAPSAIDAS 110
T L+V + DYTNP L P ++A+
Sbjct: 207 TRLNVFKNDQETWDYTNPNLG-GPEDVNAN 235
>gi|67972328|dbj|BAE02506.1| unnamed protein product [Macaca fascicularis]
Length = 437
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 98/194 (50%), Gaps = 22/194 (11%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 61 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 119
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 245
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 120 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 175
Query: 246 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 295
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 176 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 228
Query: 296 GSMPMGPGMMQMHM 309
GS+ M G+ Q+ M
Sbjct: 229 GSVVMVSGLHQLKM 242
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + V + G V +I F++ G QA+V+F A AK AL+G I
Sbjct: 75 ITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAALNGADI-------Y 126
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
G CTL+I Y+ T L+V + S DYT PYL
Sbjct: 127 AGCCTLKIEYARPTRLNVIRNDNDSWDYTKPYL 159
>gi|224046933|ref|XP_002199365.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like
[Taeniopygia guttata]
Length = 546
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 98/194 (50%), Gaps = 22/194 (11%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 170 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVFCAQKAKAA 228
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 245
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 229 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 284
Query: 246 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 295
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 285 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 337
Query: 296 GSMPMGPGMMQMHM 309
GS+ M G+ Q+ M
Sbjct: 338 GSVVMVSGLHQLKM 351
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + V + G V +I F++ G QA+V+F A AK AL+G I
Sbjct: 184 ITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVFCAQKAKAALNGADI-------Y 235
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
G CTL+I Y+ T L+V + S DYT PYL
Sbjct: 236 AGCCTLKIEYARPTRLNVIRNDNDSWDYTKPYL 268
>gi|363731463|ref|XP_414998.3| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Gallus
gallus]
Length = 514
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 98/194 (50%), Gaps = 22/194 (11%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 138 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVFCAQKAKAA 196
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 245
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 197 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 252
Query: 246 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 295
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 253 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 305
Query: 296 GSMPMGPGMMQMHM 309
GS+ M G+ Q+ M
Sbjct: 306 GSVVMVSGLHQLKM 319
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + V + G V +I F++ G QA+V+F A AK AL+G I
Sbjct: 152 ITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVFCAQKAKAALNGADI-------Y 203
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
G CTL+I Y+ T L+V + S DYT PYL
Sbjct: 204 AGCCTLKIEYARPTRLNVIRNDNDSWDYTKPYL 236
>gi|330840158|ref|XP_003292087.1| hypothetical protein DICPUDRAFT_82723 [Dictyostelium purpureum]
gi|325077693|gb|EGC31389.1| hypothetical protein DICPUDRAFT_82723 [Dictyostelium purpureum]
Length = 748
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 59/96 (61%), Gaps = 2/96 (2%)
Query: 128 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 187
+LL +I N Y VT++ L+ VFS FG V K+ +F K+G Q+LI+ + AV AK L+
Sbjct: 262 ILLITINNYLYNVTIEELYKVFSNFGTVNKVLLFTKSGNYQSLIEMKTPEEAVKAKNNLD 321
Query: 188 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTL 223
G I C L I +S T L IK NN++SRD+T+
Sbjct: 322 GMNI--NNTCSLKIQFSSLTSLKIKYNNEKSRDFTV 355
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 50/84 (59%), Gaps = 8/84 (9%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCT 72
+ +VFS FG V+K+ F K+ +Q+L++ E A AKN LDG +I C+
Sbjct: 279 LYKVFSNFGTVNKVLLFTKSGNYQSLIEMKTPEEAVKAKNNLDGMNIN--------NTCS 330
Query: 73 LRITYSAHTDLSVKFQSHRSRDYT 96
L+I +S+ T L +K+ + +SRD+T
Sbjct: 331 LKIQFSSLTSLKIKYNNEKSRDFT 354
>gi|432889398|ref|XP_004075257.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 2
[Oryzias latipes]
Length = 526
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 109/234 (46%), Gaps = 43/234 (18%)
Query: 66 ENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPE 125
E+M + +TY+A + Y+ P+ I+ S + G +
Sbjct: 81 EDMNGSSTAVTYAADNQV---------------YIAGHPAFINYSTSKKISRPGDSDDSR 125
Query: 126 S--NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAK 183
S NVLL +I N Y +T DVL+ + + GPVQ+I +F KN G+QA++++ VQ+A AK
Sbjct: 126 SVNNVLLFTIMNPIYPITTDVLYTICNNCGPVQRIVIFRKN-GVQAMVEFDSVQSAQRAK 184
Query: 184 EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP--------------STPMV 229
+L G IY G C L I Y++ T L++ N+ + DYT P S +
Sbjct: 185 ASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPNLGGPDGDADGNGSSAEDM 243
Query: 230 NS-------QPSILGQQPVPMVGATANQYNGAQFAPPPPEQPMMHQPTAAGWGA 276
N+ QP++LG P P G + Y+ + PP E M PT G G
Sbjct: 244 NANPNKRPRQPALLGDHP-PEYGGGYHGYD-ENYGSPPYEGRRM-GPTMRGRGG 294
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 8/99 (8%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCT 72
+ + + G V +I F K G QA+V+F ++A AK +L+G I G CT
Sbjct: 147 LYTICNNCGPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIYS-------GCCT 198
Query: 73 LRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASG 111
L+I Y+ T L+V + DYTNP L D +G
Sbjct: 199 LKIEYAKPTRLNVFKNDQDTWDYTNPNLGGPDGDADGNG 237
>gi|326915072|ref|XP_003203845.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like
[Meleagris gallopavo]
Length = 489
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 97/194 (50%), Gaps = 22/194 (11%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 113 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVFCAQKAKAA 171
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 245
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 172 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 227
Query: 246 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 295
+ + + P P+ P G+ +P AS S GN P
Sbjct: 228 EHPSSFRHDGYGSHGPLLPL---PNRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 280
Query: 296 GSMPMGPGMMQMHM 309
GS+ M G+ Q+ M
Sbjct: 281 GSVVMVSGLHQLKM 294
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + V + G V +I F++ G QA+V+F A AK AL+G I
Sbjct: 127 ITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVFCAQKAKAALNGADI-------Y 178
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
G CTL+I Y+ T L+V + S DYT PYL
Sbjct: 179 AGCCTLKIEYARPTRLNVIRNDNDSWDYTKPYL 211
>gi|47224789|emb|CAG06359.1| unnamed protein product [Tetraodon nigroviridis]
Length = 609
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 90/164 (54%), Gaps = 11/164 (6%)
Query: 99 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 156
Y+ P+ I+ S + G + S NVLL +I N Y +T DVL+ + + GPVQ
Sbjct: 99 YIAGHPAFINYSTSQKISRPGDSDDSRSVNNVLLFTIMNPIYPITTDVLYTICNNCGPVQ 158
Query: 157 KIAMFDKNGGLQALIQYP---DVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKV 213
+I +F KN G+QA+++YP VQ+A AK +L G IY G C L I Y++ T L++
Sbjct: 159 RIVIFRKN-GVQAMVEYPFIDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFK 216
Query: 214 NNDRSRDYTLPST---PMVNSQPSILGQQPVPMVGATANQYNGA 254
N+ + DYT P+ VN+ P+ +QP ++G +Y G
Sbjct: 217 NDQETWDYTNPNLGGPEDVNANPNKRQRQPA-LLGDHPPEYGGG 259
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 12/93 (12%)
Query: 21 GFVHKITTFEKTAGFQALVQF---SDTETASSAKNALDGRSIPRYLLPENMGPCTLRITY 77
G V +I F K G QA+V++ ++A AK +L+G I G CTL+I Y
Sbjct: 155 GPVQRIVIFRKN-GVQAMVEYPFIDSVQSAQRAKASLNGADI-------YSGCCTLKIEY 206
Query: 78 SAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDAS 110
+ T L+V + DYTNP L P ++A+
Sbjct: 207 AKPTRLNVFKNDQETWDYTNPNLG-GPEDVNAN 238
>gi|297307105|ref|NP_001167465.1| heterogeneous nuclear ribonucleoprotein L [Xenopus laevis]
gi|50416457|gb|AAH77493.1| Unknown (protein for MGC:82601) [Xenopus laevis]
Length = 538
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 79/149 (53%), Gaps = 15/149 (10%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+NVLL +I N Y++T DVL+ + + GPV++I +F KN G+QA++++ VQ+A AK +
Sbjct: 142 NNVLLLTILNPIYSITTDVLYTICNPCGPVERIVIFRKN-GVQAMVEFDSVQSAQRAKAS 200
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP----------MVNSQPSI 235
L G IY G C L I Y++ + L++ N+ + DYT P P +
Sbjct: 201 LNGADIYS-GCCTLKIEYAKPSRLNVFKNDQDTWDYTNPGLSGQGDAAGNPNKRQRNPPL 259
Query: 236 LGQQPVPMVGATA---NQYNGAQFAPPPP 261
LG P G A Y+ + PPPP
Sbjct: 260 LGDHPAEYGGPHAGYHGHYHEEAYGPPPP 288
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 52/104 (50%), Gaps = 14/104 (13%)
Query: 3 LTLSLLKVIF------ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDG 56
L L++L I+ + + + G V +I F K G QA+V+F ++A AK +L+G
Sbjct: 145 LLLTILNPIYSITTDVLYTICNPCGPVERIVIFRKN-GVQAMVEFDSVQSAQRAKASLNG 203
Query: 57 RSIPRYLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
I G CTL+I Y+ + L+V + DYTNP L
Sbjct: 204 ADI-------YSGCCTLKIEYAKPSRLNVFKNDQDTWDYTNPGL 240
>gi|154147563|ref|NP_001093751.1| heterogeneous nuclear ribonucleoprotein L [Xenopus (Silurana)
tropicalis]
gi|140832702|gb|AAI35425.1| hnrpl protein [Xenopus (Silurana) tropicalis]
Length = 538
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 15/149 (10%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+NVLL +I N Y++T DVL+ + + GPVQ+I +F KN G+QA++++ +Q+A AK +
Sbjct: 142 NNVLLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKN-GVQAMVEFDSMQSAQRAKAS 200
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP----------MVNSQPSI 235
L G IY G C L I Y++ + L++ N+ + DYT P+ P +
Sbjct: 201 LNGADIYS-GCCTLKIEYAKPSRLNVFKNDQDTWDYTNPALSGQGDAAGNPNKRQRNPPL 259
Query: 236 LGQQPVPMVGATA---NQYNGAQFAPPPP 261
LG P G A Y+ + PPPP
Sbjct: 260 LGDHPAEYGGPHAGYHGHYHEEAYGPPPP 288
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 3 LTLSLLKVIF------ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDG 56
L ++L I+ + + + G V +I F K G QA+V+F ++A AK +L+G
Sbjct: 145 LLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKN-GVQAMVEFDSMQSAQRAKASLNG 203
Query: 57 RSIPRYLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
I G CTL+I Y+ + L+V + DYTNP L
Sbjct: 204 ADI-------YSGCCTLKIEYAKPSRLNVFKNDQDTWDYTNPAL 240
>gi|443732513|gb|ELU17197.1| hypothetical protein CAPTEDRAFT_161728, partial [Capitella teleta]
Length = 546
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 72/124 (58%), Gaps = 4/124 (3%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G E + VLL +I N +Y +T+DV+H + S GPV +I +F KN GLQ ++++ ++
Sbjct: 120 GNHEETPNKVLLFTIFNPKYPITVDVMHTIASNNGPVARIVIFRKN-GLQCMVEFETLEG 178
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM--VNSQPSIL 236
A AK AL G IY G C L I Y++ T L++ N+ DYT PS P NS+ + L
Sbjct: 179 AQRAKSALNGADIY-SGCCTLKIEYAKPTRLNVSRNDSEMWDYTTPSGPKSDFNSKSAPL 237
Query: 237 GQQP 240
+P
Sbjct: 238 LAEP 241
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 44/94 (46%), Gaps = 8/94 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + + S G V +I F K G Q +V+F E A AK+AL+G I
Sbjct: 141 ITVDVMHTIASNNGPVARIVIFRKN-GLQCMVEFETLEGAQRAKSALNGADI-------Y 192
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLP 101
G CTL+I Y+ T L+V DYT P P
Sbjct: 193 SGCCTLKIEYAKPTRLNVSRNDSEMWDYTTPSGP 226
>gi|387018124|gb|AFJ51180.1| Heterogeneous nuclear ribonucleoprotein L-like [Crotalus
adamanteus]
Length = 539
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 95/191 (49%), Gaps = 16/191 (8%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 163 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 221
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 245
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 222 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 277
Query: 246 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA-------VPPASQSMPMMGNHPYMPPGSM 298
+ + + P P+ + A +P AS S GN P GS+
Sbjct: 278 EHPSSFRHDGYGSHGPLLPLPSRYRMASRDTPELVAYPLPQASSSYMHGGN----PSGSV 333
Query: 299 PMGPGMMQMHM 309
M G+ Q M
Sbjct: 334 VMVSGLHQQKM 344
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + V + G V +I F++ G QA+V+F A AK AL+G I
Sbjct: 177 ITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAALNGADI-------Y 228
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
G CTL+I Y+ T L+V + S DYT PYL
Sbjct: 229 AGCCTLKIEYARPTRLNVIRNDNDSWDYTKPYL 261
>gi|242023546|ref|XP_002432193.1| Polypyrimidine tract-binding protein, putative [Pediculus humanus
corporis]
gi|212517590|gb|EEB19455.1| Polypyrimidine tract-binding protein, putative [Pediculus humanus
corporis]
Length = 513
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 65/103 (63%), Gaps = 8/103 (7%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKN-GGLQALIQYPDVQTAVVAKE 184
+ VL IE+M Y VTLDVL+ V +KI + ++ QALIQYPDV TA AK
Sbjct: 136 NTVLRVIIEHMVYPVTLDVLYKVR------RKILLTRQSFRSFQALIQYPDVITAQAAKL 189
Query: 185 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
+L+G IY+ C L I YS+ + L++K NND+SRDYT P+ P
Sbjct: 190 SLDGRNIYNSC-CTLRIEYSKLSALNVKYNNDKSRDYTNPNLP 231
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 47/76 (61%), Gaps = 7/76 (9%)
Query: 26 ITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAHTDLSV 85
+ T + FQAL+Q+ D TA +AK +LDGR+I CTLRI YS + L+V
Sbjct: 163 LLTRQSFRSFQALIQYPDVITAQAAKLSLDGRNIYN-------SCCTLRIEYSKLSALNV 215
Query: 86 KFQSHRSRDYTNPYLP 101
K+ + +SRDYTNP LP
Sbjct: 216 KYNNDKSRDYTNPNLP 231
>gi|109102685|ref|XP_001109971.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 3
[Macaca mulatta]
Length = 537
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 97/194 (50%), Gaps = 22/194 (11%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ + V A AK A
Sbjct: 161 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAA 219
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 245
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 220 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 275
Query: 246 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 295
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 276 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 328
Query: 296 GSMPMGPGMMQMHM 309
GS+ M G+ Q+ M
Sbjct: 329 GSVVMVSGLHQLKM 342
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + V + G V +I F++ G QA++ F A AK AL+G I
Sbjct: 175 ITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAALNGADI-------Y 226
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
G CTL+I Y+ T L+V + S DYT PYL
Sbjct: 227 AGCCTLKIEYARPTRLNVIRNDNDSWDYTKPYL 259
>gi|335308902|ref|XP_003361415.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Sus
scrofa]
Length = 552
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 97/194 (50%), Gaps = 22/194 (11%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ + V A AK A
Sbjct: 177 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAA 235
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 245
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 236 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 291
Query: 246 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 295
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 292 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 344
Query: 296 GSMPMGPGMMQMHM 309
GS+ M G+ Q+ M
Sbjct: 345 GSVVMVSGLHQLKM 358
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + V + G V +I F++ G QA++ F A AK AL+G I
Sbjct: 191 ITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAALNGADI-------Y 242
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
G CTL+I Y+ T L+V + S DYT PYL
Sbjct: 243 AGCCTLKIEYARPTRLNVIRNDNDSWDYTKPYL 275
>gi|332227246|ref|XP_003262804.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein L-like [Nomascus leucogenys]
Length = 542
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 97/194 (50%), Gaps = 22/194 (11%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ + V A AK A
Sbjct: 166 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAA 224
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 245
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 225 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 280
Query: 246 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 295
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 281 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 333
Query: 296 GSMPMGPGMMQMHM 309
GS+ M G+ Q+ M
Sbjct: 334 GSVVMVSGLHQLKM 347
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + V + G V +I F++ G QA++ F A AK AL+G I
Sbjct: 180 ITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAALNGADI-------Y 231
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
G CTL+I Y+ T L+V + S DYT PYL
Sbjct: 232 AGCCTLKIEYARPTRLNVIRNDNDSWDYTKPYL 264
>gi|109102683|ref|XP_001109932.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 2
[Macaca mulatta]
Length = 542
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 97/194 (50%), Gaps = 22/194 (11%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ + V A AK A
Sbjct: 166 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAA 224
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 245
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 225 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 280
Query: 246 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 295
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 281 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 333
Query: 296 GSMPMGPGMMQMHM 309
GS+ M G+ Q+ M
Sbjct: 334 GSVVMVSGLHQLKM 347
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + V + G V +I F++ G QA++ F A AK AL+G I
Sbjct: 180 ITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAALNGADI-------Y 231
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
G CTL+I Y+ T L+V + S DYT PYL
Sbjct: 232 AGCCTLKIEYARPTRLNVIRNDNDSWDYTKPYL 264
>gi|291386911|ref|XP_002709958.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 2
[Oryctolagus cuniculus]
Length = 541
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 97/194 (50%), Gaps = 22/194 (11%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ + V A AK A
Sbjct: 165 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAA 223
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 245
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 224 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 279
Query: 246 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 295
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 280 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 332
Query: 296 GSMPMGPGMMQMHM 309
GS+ M G+ Q+ M
Sbjct: 333 GSVVMVSGLHQLKM 346
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + V + G V +I F++ G QA++ F A AK AL+G I
Sbjct: 179 ITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAALNGADI-------Y 230
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
G CTL+I Y+ T L+V + S DYT PYL
Sbjct: 231 AGCCTLKIEYARPTRLNVIRNDNDSWDYTKPYL 263
>gi|410035016|ref|XP_001168474.3| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 4
[Pan troglodytes]
gi|426335280|ref|XP_004029156.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Gorilla
gorilla gorilla]
gi|119620773|gb|EAX00368.1| heterogeneous nuclear ribonucleoprotein L-like, isoform CRA_a [Homo
sapiens]
Length = 537
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 97/194 (50%), Gaps = 22/194 (11%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ + V A AK A
Sbjct: 161 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAA 219
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 245
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 220 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 275
Query: 246 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 295
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 276 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 328
Query: 296 GSMPMGPGMMQMHM 309
GS+ M G+ Q+ M
Sbjct: 329 GSVVMVSGLHQLKM 342
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + V + G V +I F++ G QA++ F A AK AL+G I
Sbjct: 175 ITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAALNGADI-------Y 226
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
G CTL+I Y+ T L+V + S DYT PYL
Sbjct: 227 AGCCTLKIEYARPTRLNVIRNDNDSWDYTKPYL 259
>gi|440907649|gb|ELR57769.1| Heterogeneous nuclear ribonucleoprotein L-like protein [Bos
grunniens mutus]
Length = 541
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 97/194 (50%), Gaps = 22/194 (11%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ + V A AK A
Sbjct: 165 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAA 223
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 245
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 224 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 279
Query: 246 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 295
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 280 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 332
Query: 296 GSMPMGPGMMQMHM 309
GS+ M G+ Q+ M
Sbjct: 333 GSVVMVSGLHQLKM 346
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + V + G V +I F++ G QA++ F A AK AL+G I
Sbjct: 179 ITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAALNGADI-------Y 230
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
G CTL+I Y+ T L+V + S DYT PYL
Sbjct: 231 AGCCTLKIEYARPTRLNVIRNDNDSWDYTKPYL 263
>gi|119620776|gb|EAX00371.1| heterogeneous nuclear ribonucleoprotein L-like, isoform CRA_d [Homo
sapiens]
gi|119620777|gb|EAX00372.1| heterogeneous nuclear ribonucleoprotein L-like, isoform CRA_d [Homo
sapiens]
Length = 542
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 97/194 (50%), Gaps = 22/194 (11%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ + V A AK A
Sbjct: 166 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAA 224
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 245
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 225 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 280
Query: 246 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 295
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 281 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 333
Query: 296 GSMPMGPGMMQMHM 309
GS+ M G+ Q+ M
Sbjct: 334 GSVVMVSGLHQLKM 347
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + V + G V +I F++ G QA++ F A AK AL+G I
Sbjct: 180 ITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAALNGADI-------Y 231
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
G CTL+I Y+ T L+V + S DYT PYL
Sbjct: 232 AGCCTLKIEYARPTRLNVIRNDNDSWDYTKPYL 264
>gi|397493589|ref|XP_003817686.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 1
[Pan paniscus]
Length = 539
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 97/194 (50%), Gaps = 22/194 (11%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ + V A AK A
Sbjct: 163 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAA 221
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 245
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 222 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 277
Query: 246 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 295
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 278 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 330
Query: 296 GSMPMGPGMMQMHM 309
GS+ M G+ Q+ M
Sbjct: 331 GSVVMVSGLHQLKM 344
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + V + G V +I F++ G QA++ F A AK AL+G I
Sbjct: 177 ITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAALNGADI-------Y 228
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
G CTL+I Y+ T L+V + S DYT PYL
Sbjct: 229 AGCCTLKIEYARPTRLNVIRNDNDSWDYTKPYL 261
>gi|410955434|ref|XP_003984358.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 1
[Felis catus]
Length = 544
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 97/194 (50%), Gaps = 22/194 (11%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ + V A AK A
Sbjct: 168 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAA 226
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 245
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 227 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 282
Query: 246 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 295
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 283 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 335
Query: 296 GSMPMGPGMMQMHM 309
GS+ M G+ Q+ M
Sbjct: 336 GSVVMVSGLHQLKM 349
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + V + G V +I F++ G QA++ F A AK AL+G I
Sbjct: 182 ITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAALNGADI-------Y 233
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
G CTL+I Y+ T L+V + S DYT PYL
Sbjct: 234 AGCCTLKIEYARPTRLNVIRNDNDSWDYTKPYL 266
>gi|392339204|ref|XP_003753752.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein L-like [Rattus norvegicus]
Length = 609
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 94/177 (53%), Gaps = 17/177 (9%)
Query: 99 YLPVAPSAID--ASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQ 156
Y+ P+ I+ S ++S D + + ++VLL +I N Y++T DVL+ + + GP+Q
Sbjct: 185 YIAGHPAFINYCTSQKISRPGDSEDSQSINSVLLFTILNPIYSITTDVLYTICNPCGPIQ 244
Query: 157 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 216
+ +F +N G+QA++++ VQ+A AK +L+G IY G C L I Y++ T L++ NN
Sbjct: 245 RTVIFREN-GVQAMVEFDSVQSAQSAKASLDGADIY-SGCCTLTIEYAKPTRLNVSKNNQ 302
Query: 217 RSRDYTLP-----STPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPP 260
+ DYT P P N QP +LG P G + Y+ + PPP
Sbjct: 303 DTWDYTNPXLSGQGDPGSNHNECQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYXPPP 359
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 7/74 (9%)
Query: 27 TTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAHTDLSVK 86
T + G QA+V+F ++A SAK +LDG I G CTL I Y+ T L+V
Sbjct: 246 TVIFRENGVQAMVEFDSVQSAQSAKASLDGADI-------YSGCCTLTIEYAKPTRLNVS 298
Query: 87 FQSHRSRDYTNPYL 100
+ + DYTNP L
Sbjct: 299 KNNQDTWDYTNPXL 312
>gi|427796049|gb|JAA63476.1| Putative heteroproteinous nuclear ribonucleoprotein l, partial
[Rhipicephalus pulchellus]
Length = 523
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 74/114 (64%), Gaps = 3/114 (2%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
++VLL +I N Y +T+DV+H + + G V +I +F KNG +QA++++ V+ AV AK++
Sbjct: 115 NHVLLMTILNPAYPITVDVIHTICTPSGKVMRIVIFKKNG-VQAMVEFDGVEAAVRAKKS 173
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQ-PSILGQ 238
L G IY G C L I Y++ T L++ N++ S DYT P+ S+ P++LG+
Sbjct: 174 LNGADIYSG-CCTLKIEYAKPTRLNVYKNDNDSWDYTNPNLGKSGSERPALLGE 226
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 48/93 (51%), Gaps = 8/93 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V I + + G V +I F+K G QA+V+F E A AK +L+G I
Sbjct: 129 ITVDVIHTICTPSGKVMRIVIFKKN-GVQAMVEFDGVEAAVRAKKSLNGADI-------Y 180
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
G CTL+I Y+ T L+V + S DYTNP L
Sbjct: 181 SGCCTLKIEYAKPTRLNVYKNDNDSWDYTNPNL 213
>gi|355565619|gb|EHH22048.1| hypothetical protein EGK_05237 [Macaca mulatta]
Length = 542
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 97/194 (50%), Gaps = 22/194 (11%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ + V A AK A
Sbjct: 166 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAA 224
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 245
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 225 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 280
Query: 246 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 295
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 281 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 333
Query: 296 GSMPMGPGMMQMHM 309
GS+ M G+ Q+ M
Sbjct: 334 GSVVMVSGLHQLKM 347
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + V + G V +I F++ G QA++ F A AK AL+G I
Sbjct: 180 ITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAALNGADI-------Y 231
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
G CTL+I Y+ T L+V + S DYT PYL
Sbjct: 232 AGCCTLKIEYARPTRLNVIRNDNDSWDYTKPYL 264
>gi|281350475|gb|EFB26059.1| hypothetical protein PANDA_013339 [Ailuropoda melanoleuca]
Length = 368
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 97/194 (50%), Gaps = 22/194 (11%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ + V A AK A
Sbjct: 169 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAA 227
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 245
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 228 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 283
Query: 246 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 295
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 284 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 336
Query: 296 GSMPMGPGMMQMHM 309
GS+ M G+ Q+ M
Sbjct: 337 GSVVMVSGLHQLKM 350
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + V + G V +I F++ G QA++ F A AK AL+G I
Sbjct: 183 ITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAALNGADI-------Y 234
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
G CTL+I Y+ T L+V + S DYT PYL
Sbjct: 235 AGCCTLKIEYARPTRLNVIRNDNDSWDYTKPYL 267
>gi|392346115|ref|XP_003749467.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein L-like, partial [Rattus norvegicus]
Length = 582
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 94/177 (53%), Gaps = 17/177 (9%)
Query: 99 YLPVAPSAID--ASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQ 156
Y+ P+ I+ S ++S D + + ++VLL +I N Y++T DVL+ + + GP+Q
Sbjct: 158 YIAGHPAFINYCTSQKISRPGDSEDSQSINSVLLFTILNPIYSITTDVLYTICNPCGPIQ 217
Query: 157 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 216
+ +F +N G+QA++++ VQ+A AK +L+G IY G C L I Y++ T L++ NN
Sbjct: 218 RTVIFREN-GVQAMVEFDSVQSAQSAKASLDGADIY-SGCCTLTIEYAKPTRLNVSKNNQ 275
Query: 217 RSRDYTLP-----STPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPP 260
+ DYT P P N QP +LG P G + Y+ + PPP
Sbjct: 276 DTWDYTNPXLSGQGDPGSNHNECQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYXPPP 332
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 7/74 (9%)
Query: 27 TTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAHTDLSVK 86
T + G QA+V+F ++A SAK +LDG I G CTL I Y+ T L+V
Sbjct: 219 TVIFRENGVQAMVEFDSVQSAQSAKASLDGADI-------YSGCCTLTIEYAKPTRLNVS 271
Query: 87 FQSHRSRDYTNPYL 100
+ + DYTNP L
Sbjct: 272 KNNQDTWDYTNPXL 285
>gi|291386909|ref|XP_002709957.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 1
[Oryctolagus cuniculus]
Length = 547
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 97/194 (50%), Gaps = 22/194 (11%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ + V A AK A
Sbjct: 171 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAA 229
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 245
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 230 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 285
Query: 246 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 295
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 286 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 338
Query: 296 GSMPMGPGMMQMHM 309
GS+ M G+ Q+ M
Sbjct: 339 GSVVMVSGLHQLKM 352
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + V + G V +I F++ G QA++ F A AK AL+G I
Sbjct: 185 ITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAALNGADI-------Y 236
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
G CTL+I Y+ T L+V + S DYT PYL
Sbjct: 237 AGCCTLKIEYARPTRLNVIRNDNDSWDYTKPYL 269
>gi|338714336|ref|XP_001918049.2| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein L-like [Equus caballus]
Length = 543
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 97/194 (50%), Gaps = 22/194 (11%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ + V A AK A
Sbjct: 167 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMLTFESVLCAQKAKAA 225
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 245
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 226 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 281
Query: 246 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 295
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 282 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 334
Query: 296 GSMPMGPGMMQMHM 309
GS+ M G+ Q+ M
Sbjct: 335 GSVVMVSGLHQLKM 348
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + V + G V +I F++ G QA++ F A AK AL+G I
Sbjct: 181 ITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMLTFESVLCAQKAKAALNGADI-------Y 232
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
G CTL+I Y+ T L+V + S DYT PYL
Sbjct: 233 AGCCTLKIEYARPTRLNVIRNDNDSWDYTKPYL 265
>gi|402890606|ref|XP_003908574.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 1
[Papio anubis]
gi|119620774|gb|EAX00369.1| heterogeneous nuclear ribonucleoprotein L-like, isoform CRA_b [Homo
sapiens]
Length = 437
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 97/194 (50%), Gaps = 22/194 (11%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ + V A AK A
Sbjct: 61 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAA 119
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 245
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 120 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 175
Query: 246 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 295
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 176 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 228
Query: 296 GSMPMGPGMMQMHM 309
GS+ M G+ Q+ M
Sbjct: 229 GSVVMVSGLHQLKM 242
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + V + G V +I F++ G QA++ F A AK AL+G I
Sbjct: 75 ITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAALNGADI-------Y 126
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
G CTL+I Y+ T L+V + S DYT PYL
Sbjct: 127 AGCCTLKIEYARPTRLNVIRNDNDSWDYTKPYL 159
>gi|426226432|ref|XP_004007347.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Ovis
aries]
Length = 507
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 97/194 (50%), Gaps = 22/194 (11%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ + V A AK A
Sbjct: 131 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAA 189
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 245
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 190 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 245
Query: 246 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 295
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 246 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 298
Query: 296 GSMPMGPGMMQMHM 309
GS+ M G+ Q+ M
Sbjct: 299 GSVVMVSGLHQLKM 312
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + V + G V +I F++ G QA++ F A AK AL+G I
Sbjct: 145 ITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAALNGADI-------Y 196
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
G CTL+I Y+ T L+V + S DYT PYL
Sbjct: 197 AGCCTLKIEYARPTRLNVIRNDNDSWDYTKPYL 229
>gi|119577231|gb|EAW56827.1| heterogeneous nuclear ribonucleoprotein L, isoform CRA_b [Homo
sapiens]
Length = 590
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 94/179 (52%), Gaps = 18/179 (10%)
Query: 99 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 156
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 163 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 222
Query: 157 KIAMFDKNGGLQALIQYPDVQ-TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNN 215
+I +F KN G+QA+++YP ++ +A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 223 RIVIFRKN-GVQAMVEYPLLENSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKND 280
Query: 216 DRSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 261
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 281 QDTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 339
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 15/105 (14%)
Query: 3 LTLSLLKVIF------ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTE-TASSAKNALD 55
L ++L I+ + + + G V +I F K G QA+V++ E +A AK +L+
Sbjct: 195 LLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKN-GVQAMVEYPLLENSAQRAKASLN 253
Query: 56 GRSIPRYLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
G I G CTL+I Y+ T L+V + DYTNP L
Sbjct: 254 GADI-------YSGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPNL 291
>gi|343961675|dbj|BAK62427.1| heterogeneous nuclear ribonucleoprotein L-like protein [Pan
troglodytes]
Length = 513
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 94/185 (50%), Gaps = 28/185 (15%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 161 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 219
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 245
L G IY G C L I Y+R T L++ N++ S DYT P S +L P+P
Sbjct: 220 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYTKPYLGRRGSHGPLL---PLP--- 272
Query: 246 ATANQYN-GAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMPMMGNHPYMPPGSMPMGPGM 304
++Y G++ P P+ P AS S GN P GS+ M G+
Sbjct: 273 ---SRYRMGSRDTPELVAYPL------------PQASSSYMHGGN----PSGSVVMVSGL 313
Query: 305 MQMHM 309
Q+ M
Sbjct: 314 HQLKM 318
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + V + G V +I F++ G QA+V+F A AK AL+G I
Sbjct: 175 ITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAALNGADI-------Y 226
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
G CTL+I Y+ T L+V + S DYT PYL
Sbjct: 227 AGCCTLKIEYARPTRLNVIRNDNDSWDYTKPYL 259
>gi|395745998|ref|XP_003778369.1| PREDICTED: LOW QUALITY PROTEIN: polypyrimidine tract-binding
protein 1-like [Pongo abelii]
Length = 551
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 90/169 (53%), Gaps = 17/169 (10%)
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDA--SGQLSV-----GLD-GKKLEPES 126
I +S H L +++RD A A+++ SG L++ +D G + +S
Sbjct: 128 IQFSNHKGLKTDSSPNQARDLA------AXQAVNSVQSGNLALTAPAAAVDAGMAMAGQS 181
Query: 127 NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEAL 186
VL +EN+ Y +TLDVLH +FS FG V I F K+ QAL+QY D + A AK +L
Sbjct: 182 PVLRIIVENLFYPMTLDVLHQIFSKFGKVNTIT-FIKDNQFQALLQYADPENAQHAKLSL 240
Query: 187 EGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
+ Y+ L I +S+ T L+++ ND+S DY P P +SQPS+
Sbjct: 241 DWQNTYNACIT-LCIDFSKLTSLNVRY-NDKSSDYXRPDLPSRDSQPSL 287
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 115/247 (46%), Gaps = 57/247 (23%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
Q+FS FG V+ IT F K FQAL+Q++D E A AK +LD ++ + TL
Sbjct: 202 QIFSKFGKVNTIT-FIKDNQFQALLQYADPENAQHAKLSLDWQNTYNACI-------TLC 253
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLP--------------------------VAPSAI- 107
I +S T L+V++ +S DY P LP +AP AI
Sbjct: 254 IDFSKLTSLNVRYND-KSSDYXRPDLPSRDSQPSLDQXMAAAFDLSVPNIHGALAPLAIP 312
Query: 108 ------DASGQLSV-GLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAM 160
A+G+++ GL G ++VLL S N + VT L ++FS +G VQ + +
Sbjct: 313 LAVAAAAAAGRIATPGLAGAG----NSVLLVSNLNPER-VTPQSLFILFSVYGDVQCVKI 367
Query: 161 -FDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKL-HISYSRHTDLSI----KVN 214
F+K AL+Q D A +A H ++ +L I+ S+H ++ + + +
Sbjct: 368 SFNKE---NALVQMADGNQAQLALSHRNWHKLHGKPPHRLVRITPSKHQNVQLPREGRED 424
Query: 215 NDRSRDY 221
D ++DY
Sbjct: 425 QDLTKDY 431
>gi|348574608|ref|XP_003473082.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Cavia
porcellus]
Length = 541
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 96/194 (49%), Gaps = 22/194 (11%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA+ + V A AK A
Sbjct: 165 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMFMFESVLCAQKAKAA 223
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 245
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 224 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 279
Query: 246 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 295
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 280 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 332
Query: 296 GSMPMGPGMMQMHM 309
GS+ M G+ Q+ M
Sbjct: 333 GSVVMVSGLHQLKM 346
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + V + G V +I F++ G QA+ F A AK AL+G I
Sbjct: 179 ITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMFMFESVLCAQKAKAALNGADI-------Y 230
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
G CTL+I Y+ T L+V + S DYT PYL
Sbjct: 231 AGCCTLKIEYARPTRLNVIRNDNDSWDYTKPYL 263
>gi|355755804|gb|EHH59551.1| hypothetical protein EGM_09690, partial [Macaca fascicularis]
Length = 501
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 94/179 (52%), Gaps = 18/179 (10%)
Query: 99 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 156
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 74 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 133
Query: 157 KIAMFDKNGGLQALIQYPDVQ-TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNN 215
+I +F KN G+QA+++YP ++ +A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 134 RIVIFRKN-GVQAMVEYPLLENSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKND 191
Query: 216 DRSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 261
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 192 QDTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 250
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 15/105 (14%)
Query: 3 LTLSLLKVIF------ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTE-TASSAKNALD 55
L ++L I+ + + + G V +I F K G QA+V++ E +A AK +L+
Sbjct: 106 LLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKN-GVQAMVEYPLLENSAQRAKASLN 164
Query: 56 GRSIPRYLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
G I G CTL+I Y+ T L+V + DYTNP L
Sbjct: 165 GADI-------YSGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPNL 202
>gi|74147193|dbj|BAE27500.1| unnamed protein product [Mus musculus]
Length = 670
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 95/190 (50%), Gaps = 14/190 (7%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 294 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 352
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 245
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 353 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 408
Query: 246 ATANQYNGAQFAP-----PPPEQPMMHQPTAAGWGAVP-PASQSMPMMGNHPYMPPGSMP 299
+ + + P P + M A P P + S M G P GS+
Sbjct: 409 DHPSSFRHDGYGSHGPLLPLPSRYRMGSRDTPELVAYPLPQASSSYMHGGS---PSGSVV 465
Query: 300 MGPGMMQMHM 309
M G+ Q+ M
Sbjct: 466 MVSGLHQLKM 475
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + V + G V +I F++ G QA+V+F A AK AL+G I
Sbjct: 308 ITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAALNGADI-------Y 359
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
G CTL+I Y+ T L+V + S DYT PYL
Sbjct: 360 AGCCTLKIEYARPTRLNVIRNDNDSWDYTKPYL 392
>gi|12849891|dbj|BAB28521.1| unnamed protein product [Mus musculus]
Length = 588
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 95/190 (50%), Gaps = 14/190 (7%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 212 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 270
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 245
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 271 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 326
Query: 246 ATANQYNGAQFAP-----PPPEQPMMHQPTAAGWGAVP-PASQSMPMMGNHPYMPPGSMP 299
+ + + P P + M A P P + S M G P GS+
Sbjct: 327 DHPSSFRHDGYGSHGPLLPLPSRYRMGSRDTPELVAYPLPQASSSYMHGGS---PSGSVV 383
Query: 300 MGPGMMQMHM 309
M G+ Q+ M
Sbjct: 384 MVSGLHQLKM 393
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + V + G V +I F++ G QA+V+F A AK AL+G I
Sbjct: 226 ITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAALNGADI-------Y 277
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
G CTL+I Y+ T L+V + S DYT PYL
Sbjct: 278 AGCCTLKIEYARPTRLNVIRNDNDSWDYTKPYL 310
>gi|37514843|gb|AAH12849.2| Hnrpll protein [Mus musculus]
Length = 594
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 95/190 (50%), Gaps = 14/190 (7%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 218 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 276
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 245
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 277 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 332
Query: 246 ATANQYNGAQFAP-----PPPEQPMMHQPTAAGWGAVP-PASQSMPMMGNHPYMPPGSMP 299
+ + + P P + M A P P + S M G P GS+
Sbjct: 333 DHPSSFRHDGYGSHGPLLPLPSRYRMGSRDTPELVAYPLPQASSSYMHGGS---PSGSVV 389
Query: 300 MGPGMMQMHM 309
M G+ Q+ M
Sbjct: 390 MVSGLHQLKM 399
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + V + G V +I F++ G QA+V+F A AK AL+G I
Sbjct: 232 ITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAALNGADI-------Y 283
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
G CTL+I Y+ T L+V + S DYT PYL
Sbjct: 284 AGCCTLKIEYARPTRLNVIRNDNDSWDYTKPYL 316
>gi|110347535|ref|NP_659051.3| heterogeneous nuclear ribonucleoprotein L-like [Mus musculus]
gi|62286942|sp|Q921F4.3|HNRLL_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein L-like
Length = 591
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 95/190 (50%), Gaps = 14/190 (7%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 215 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 273
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 245
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 274 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 329
Query: 246 ATANQYNGAQFAP-----PPPEQPMMHQPTAAGWGAVP-PASQSMPMMGNHPYMPPGSMP 299
+ + + P P + M A P P + S M G P GS+
Sbjct: 330 DHPSSFRHDGYGSHGPLLPLPSRYRMGSRDTPELVAYPLPQASSSYMHGGS---PSGSVV 386
Query: 300 MGPGMMQMHM 309
M G+ Q+ M
Sbjct: 387 MVSGLHQLKM 396
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + V + G V +I F++ G QA+V+F A AK AL+G I
Sbjct: 229 ITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAALNGADI-------Y 280
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
G CTL+I Y+ T L+V + S DYT PYL
Sbjct: 281 AGCCTLKIEYARPTRLNVIRNDNDSWDYTKPYL 313
>gi|293347913|ref|XP_001063027.2| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Rattus
norvegicus]
gi|293359746|ref|XP_233805.5| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Rattus
norvegicus]
Length = 591
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 95/190 (50%), Gaps = 14/190 (7%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 215 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 273
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 245
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 274 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 329
Query: 246 ATANQYNGAQFAP-----PPPEQPMMHQPTAAGWGAVP-PASQSMPMMGNHPYMPPGSMP 299
+ + + P P + M A P P + S M G P GS+
Sbjct: 330 DHPSSFRHDGYGSHGPLLPLPSRYRMGSRDTPELVAYPLPQASSSYMHGGS---PSGSVV 386
Query: 300 MGPGMMQMHM 309
M G+ Q+ M
Sbjct: 387 MVSGLHQLKM 396
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + V + G V +I F++ G QA+V+F A AK AL+G I
Sbjct: 229 ITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAALNGADI-------Y 280
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
G CTL+I Y+ T L+V + S DYT PYL
Sbjct: 281 AGCCTLKIEYARPTRLNVIRNDNDSWDYTKPYL 313
>gi|351715514|gb|EHB18433.1| Heterogeneous nuclear ribonucleoprotein L-like protein, partial
[Heterocephalus glaber]
Length = 479
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 96/194 (49%), Gaps = 22/194 (11%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA+ + V A AK A
Sbjct: 103 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMFMFESVLCAQKAKAA 161
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 245
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 162 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 217
Query: 246 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 295
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 218 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 270
Query: 296 GSMPMGPGMMQMHM 309
GS+ M G+ Q+ M
Sbjct: 271 GSVVMVSGLHQLKM 284
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + V + G V +I F++ G QA+ F A AK AL+G I
Sbjct: 117 ITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMFMFESVLCAQKAKAALNGADI-------Y 168
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
G CTL+I Y+ T L+V + S DYT PYL
Sbjct: 169 AGCCTLKIEYARPTRLNVIRNDNDSWDYTKPYL 201
>gi|327262697|ref|XP_003216160.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Anolis
carolinensis]
Length = 551
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 71/120 (59%), Gaps = 7/120 (5%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 175 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 233
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNS-----QPSILGQQP 240
L G IY G C L I Y+R T L++ N++ S DYT P + + +ILG+ P
Sbjct: 234 LNGADIY-AGCCTLKIEYARPTRLNVTQNDNDSWDYTKPYLGRRDRGKGRQRQAILGEHP 292
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + V + G V +I F++ G QA+V+F A AK AL+G I
Sbjct: 189 ITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAALNGADI-------Y 240
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
G CTL+I Y+ T L+V + S DYT PYL
Sbjct: 241 AGCCTLKIEYARPTRLNVTQNDNDSWDYTKPYL 273
>gi|348522987|ref|XP_003449005.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 1
[Oreochromis niloticus]
Length = 527
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 104/217 (47%), Gaps = 41/217 (18%)
Query: 66 ENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPE 125
E+M + +TY+A + Y+ P+ I+ S + G +
Sbjct: 81 EDMNGSSTAVTYAADNQV---------------YIAGHPAFINYSTSQKISRPGDSDDSR 125
Query: 126 S--NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAK 183
+ NVLL +I N Y +T DVL+ + + GPVQ+I +F KN G+QA++++ VQ+A AK
Sbjct: 126 TVNNVLLFTIMNPIYPITTDVLYTICNNCGPVQRIVIFRKN-GVQAMVEFDSVQSAQRAK 184
Query: 184 EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP--------------STPMV 229
+L G IY G C L I Y++ T L++ N+ + DYT P + V
Sbjct: 185 ASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPNLGGPDGDADGNGSNADDV 243
Query: 230 NS-------QPSILGQQPVPMVGATANQYNGAQFAPP 259
N+ QP++LG P P G + Y+ + +PP
Sbjct: 244 NANPNKRQRQPALLGDHP-PEYGGGYHGYDESYGSPP 279
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 8/99 (8%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCT 72
+ + + G V +I F K G QA+V+F ++A AK +L+G I G CT
Sbjct: 147 LYTICNNCGPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIYS-------GCCT 198
Query: 73 LRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASG 111
L+I Y+ T L+V + DYTNP L D +G
Sbjct: 199 LKIEYAKPTRLNVFKNDQDTWDYTNPNLGGPDGDADGNG 237
>gi|66809907|ref|XP_638677.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|60467316|gb|EAL65349.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 892
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 58/96 (60%), Gaps = 2/96 (2%)
Query: 128 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 187
+LL +I N Y +T+D L VFS +G + KI +F K+G Q+LI+ + A AK L+
Sbjct: 400 ILLVTISNYFYNITIDELFKVFSHYGTILKILLFTKSGNYQSLIEMKTPEEATKAKNVLD 459
Query: 188 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTL 223
G I + C L I YS T L IK NN++SRD+T+
Sbjct: 460 GVNINNS--CSLKIQYSSLTSLKIKYNNEKSRDFTV 493
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 50/84 (59%), Gaps = 8/84 (9%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCT 72
+ +VFS +G + KI F K+ +Q+L++ E A+ AKN LDG +I C+
Sbjct: 417 LFKVFSHYGTILKILLFTKSGNYQSLIEMKTPEEATKAKNVLDGVNIN--------NSCS 468
Query: 73 LRITYSAHTDLSVKFQSHRSRDYT 96
L+I YS+ T L +K+ + +SRD+T
Sbjct: 469 LKIQYSSLTSLKIKYNNEKSRDFT 492
>gi|449274548|gb|EMC83649.1| Heterogeneous nuclear ribonucleoprotein L-like protein, partial
[Columba livia]
Length = 471
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 98/194 (50%), Gaps = 24/194 (12%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA+++YP A AK A
Sbjct: 97 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEYP--FCAQKAKAA 153
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 245
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 154 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 209
Query: 246 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 295
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 210 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 262
Query: 296 GSMPMGPGMMQMHM 309
GS+ M G+ Q+ M
Sbjct: 263 GSVVMVSGLHQLKM 276
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 10/93 (10%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + V + G V +I F++ G QA+V++ A AK AL+G I
Sbjct: 111 ITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEYP--FCAQKAKAALNGADI-------Y 160
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
G CTL+I Y+ T L+V + S DYT PYL
Sbjct: 161 AGCCTLKIEYARPTRLNVIRNDNDSWDYTKPYL 193
>gi|302790736|ref|XP_002977135.1| hypothetical protein SELMODRAFT_443468 [Selaginella moellendorffii]
gi|300155111|gb|EFJ21744.1| hypothetical protein SELMODRAFT_443468 [Selaginella moellendorffii]
Length = 466
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 69/124 (55%), Gaps = 3/124 (2%)
Query: 124 PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAK 183
P S VL ++ N Y + + VLH VFS G V+KI + + G+ IQ+ V+TA K
Sbjct: 126 PSSKVLAVTVTNPIYPIDVYVLHRVFSPHGSVEKITI-SRKLGICGYIQFDSVKTAAHVK 184
Query: 184 EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP-MVNSQPSILGQQPVP 242
+ L I+DG CK+ I Y++ +L + N+D +RD+ S P V S PSILG PV
Sbjct: 185 DLLNDRHIFDGC-CKMEIQYAKSQELGVYFNDDNNRDFKDTSIPSRVRSDPSILGAPPVE 243
Query: 243 MVGA 246
V A
Sbjct: 244 SVPA 247
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 100/231 (43%), Gaps = 38/231 (16%)
Query: 11 IFIL-QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMG 69
+++L +VFS G V KIT K G +QF +TA+ K+ L+ R I G
Sbjct: 144 VYVLHRVFSPHGSVEKITISRKL-GICGYIQFDSVKTAAHVKDLLNDRHIFD-------G 195
Query: 70 PCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVA----PSAIDASGQLSV-GLDGKK--- 121
C + I Y+ +L V F +RD+ + +P PS + A SV L +
Sbjct: 196 CCKMEIQYAKSQELGVYFNDDNNRDFKDTSIPSRVRSDPSILGAPPVESVPALTAEDAAA 255
Query: 122 ----------LEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALI 171
+ V+ S N++ V D L +FS +G ++K+ + G Q LI
Sbjct: 256 GAPAVVPTPFIGRRKRVVRVSNLNVE-KVDEDKLFNLFSPYGKIRKVQVIKVTG--QGLI 312
Query: 172 QYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 222
+ D A +A L+G +++ + + ++N ++SRDYT
Sbjct: 313 EMSDAFQAELASACLKGARVFEKELDTVVVDK--------ELNLNQSRDYT 355
>gi|417402541|gb|JAA48116.1| Putative hnrnp-l/ptb/hephaestus splicing factor family [Desmodus
rotundus]
Length = 542
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 97/194 (50%), Gaps = 22/194 (11%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 166 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 224
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 245
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 225 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 280
Query: 246 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 295
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 281 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 333
Query: 296 GSMPMGPGMMQMHM 309
GS+ M G+ + M
Sbjct: 334 GSVVMVSGLHPLKM 347
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + V + G V +I F++ G QA+V+F A AK AL+G I
Sbjct: 180 ITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAALNGADI-------Y 231
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
G CTL+I Y+ T L+V + S DYT PYL
Sbjct: 232 AGCCTLKIEYARPTRLNVIRNDNDSWDYTKPYL 264
>gi|330789887|ref|XP_003283030.1| hypothetical protein DICPUDRAFT_85687 [Dictyostelium purpureum]
gi|325087102|gb|EGC40483.1| hypothetical protein DICPUDRAFT_85687 [Dictyostelium purpureum]
Length = 488
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 61/98 (62%), Gaps = 1/98 (1%)
Query: 127 NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEAL 186
N++L +I N Y +T + LH + S +G V +I +F K GLQA +++ +A AKE L
Sbjct: 135 NIILCTILNPFYPITTNTLHTIMSPYGRVLRIVIFQKKSGLQAFVEFDSPYSANTAKETL 194
Query: 187 EGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP 224
G+ IY CKL I ++R + L++K N++++ DYT P
Sbjct: 195 NGYNIYTEC-CKLQIEFARVSKLNVKQNDEKTADYTTP 231
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 114/250 (45%), Gaps = 46/250 (18%)
Query: 16 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 75
+ S +G V +I F+K +G QA V+F +A++AK L+G +I C L+I
Sbjct: 156 IMSPYGRVLRIVIFQKKSGLQAFVEFDSPYSANTAKETLNGYNIYTEC-------CKLQI 208
Query: 76 TYSAHTDLSVKFQSHRSRDYTNP-----YLPVAPSAID----ASGQLSVG-------LDG 119
++ + L+VK ++ DYT P L +P + A+G G ++G
Sbjct: 209 EFARVSKLNVKQNDEKTADYTTPDFYSQQLIQSPQGMQMYHHAAGSNPFGASHGAGFING 268
Query: 120 KKLE--------------PES-NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKN 164
+ PES N + S+ + + D L +F +G V KI M +
Sbjct: 269 GGPQQYGGAPYMYPAVGNPESVNQPVISVSKIPEDIDTDKLFNLFCLYGNVIKIKMLHNS 328
Query: 165 GGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP 224
G A++Q D A +A + L IY K++ +++H + V++++++DY+
Sbjct: 329 KG-SAMVQMGDSIQAEIAVQCLNHSFIYGQ---KINCYHTKHPFI---VDSEKTKDYSKS 381
Query: 225 S-TPMVNSQP 233
+ +NSQP
Sbjct: 382 TLNRFLNSQP 391
>gi|325184968|emb|CCA19460.1| hypothetical protein SELMODRAFT_173175 [Albugo laibachii Nc14]
Length = 466
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 108/227 (47%), Gaps = 31/227 (13%)
Query: 16 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 75
+FS FG V KI FEK G Q L+Q S E A++AK AL+G +I P+ C L I
Sbjct: 153 IFSYFGKVEKIVIFEKAIGLQCLIQLSFIEDATAAKKALNGVNI----FPD---CCCLII 205
Query: 76 TYSAHT-DLSVKFQSHRSRDYTNPYLPVAP------------SAIDASGQLSVGLDGKKL 122
YS + +L VK R+ D+TN L P AI+ + + +
Sbjct: 206 HYSKLSQELVVKTNGPRTWDFTNSNLSNQPDGNEADIALETCEAINKAAFATANMTNSGQ 265
Query: 123 EPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVA 182
E E+ VL S N++ +VT D L +FS +G V ++ F+ AL+Q+ A A
Sbjct: 266 EIETLVLFVS--NLRESVTCDQLFNLFSCYGNVARVKKFNSKPD-HALVQFSTPAFAQSA 322
Query: 183 KEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMV 229
L G ++ L I++S+H +++ + +++ ST MV
Sbjct: 323 LLHLRGFTLFGRS---LEITFSKHAYINVSAGSSKTK-----STGMV 361
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 60/96 (62%), Gaps = 2/96 (2%)
Query: 128 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 187
+LL +++N Y +T D++ +FS FG V+KI +F+K GLQ LIQ ++ A AK+AL
Sbjct: 133 ILLVTVQNPLYPITADLMASIFSYFGKVEKIVIFEKAIGLQCLIQLSFIEDATAAKKALN 192
Query: 188 GHCIYDGGFCKLHISYSRHT-DLSIKVNNDRSRDYT 222
G I+ C L I YS+ + +L +K N R+ D+T
Sbjct: 193 GVNIFPDCCC-LIIHYSKLSQELVVKTNGPRTWDFT 227
>gi|432889400|ref|XP_004075258.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 3
[Oryzias latipes]
Length = 490
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 85/162 (52%), Gaps = 19/162 (11%)
Query: 66 ENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPE 125
E+M + +TY+A + Y+ P+ I+ S + G +
Sbjct: 81 EDMNGSSTAVTYAADNQV---------------YIAGHPAFINYSTSKKISRPGDSDDSR 125
Query: 126 S--NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAK 183
S NVLL +I N Y +T DVL+ + + GPVQ+I +F KN G+QA++++ VQ+A AK
Sbjct: 126 SVNNVLLFTIMNPIYPITTDVLYTICNNCGPVQRIVIFRKN-GVQAMVEFDSVQSAQRAK 184
Query: 184 EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 225
+L G IY G C L I Y++ T L++ N+ + DYT P+
Sbjct: 185 ASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPN 225
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 21 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 80
G V +I F K G QA+V+F ++A AK +L+G I G CTL+I Y+
Sbjct: 155 GPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIYS-------GCCTLKIEYAKP 206
Query: 81 TDLSVKFQSHRSRDYTNPYL 100
T L+V + DYTNP L
Sbjct: 207 TRLNVFKNDQDTWDYTNPNL 226
>gi|417401975|gb|JAA47851.1| Putative hnrnp-l/ptb/hephaestus splicing factor family [Desmodus
rotundus]
Length = 502
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 63/99 (63%), Gaps = 2/99 (2%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 166 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 224
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP 224
L G IY G C L I Y+R T L++ N++ S DYT P
Sbjct: 225 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYTKP 262
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + V + G V +I F++ G QA+V+F A AK AL+G I
Sbjct: 180 ITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAALNGADI-------Y 231
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
G CTL+I Y+ T L+V + S DYT PYL
Sbjct: 232 AGCCTLKIEYARPTRLNVIRNDNDSWDYTKPYL 264
>gi|197927211|ref|NP_001128232.1| heterogeneous nuclear ribonucleoprotein L isoform a [Rattus
norvegicus]
Length = 623
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 84/155 (54%), Gaps = 14/155 (9%)
Query: 99 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 156
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 160 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 219
Query: 157 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 216
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 220 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 277
Query: 217 RSRDYTLPS-----TPMVN-----SQPSILGQQPV 241
+ DYT P+ P N QP +LG P
Sbjct: 278 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPA 312
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 3 LTLSLLKVIF------ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDG 56
L ++L I+ + + + G V +I F K G QA+V+F ++A AK +L+G
Sbjct: 192 LLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNG 250
Query: 57 RSIPRYLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
I G CTL+I Y+ T L+V + DYTNP L
Sbjct: 251 ADI-------YSGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPNL 287
>gi|213510846|ref|NP_001133491.1| Heterogeneous nuclear ribonucleoprotein L-like [Salmo salar]
gi|209154218|gb|ACI33341.1| Heterogeneous nuclear ribonucleoprotein L-like [Salmo salar]
Length = 548
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 75/140 (53%), Gaps = 2/140 (1%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VLL SI+N Y +T DVL+ V + G V +I +F +N G+QA++++ ++ A AK A
Sbjct: 171 NKVLLLSIQNPLYPITTDVLYTVCNPIGSVMRIVIFKRN-GIQAMVEFESIECAQKAKAA 229
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 245
L G IY G C L I Y+R T L++ N++ S DYT P + G+Q ++G
Sbjct: 230 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNESWDYTKPYLVRRDVSERGKGRQRQAILG 288
Query: 246 ATANQYNGAQFAPPPPEQPM 265
+ Y + P P+
Sbjct: 289 EHPSSYGDNGYGSHCPLLPL 308
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 46/88 (52%), Gaps = 8/88 (9%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCT 72
+ V + G V +I F++ G QA+V+F E A AK AL+G I G CT
Sbjct: 190 LYTVCNPIGSVMRIVIFKRN-GIQAMVEFESIECAQKAKAALNGADI-------YAGCCT 241
Query: 73 LRITYSAHTDLSVKFQSHRSRDYTNPYL 100
L+I Y+ T L+V + S DYT PYL
Sbjct: 242 LKIEYARPTRLNVIRNDNESWDYTKPYL 269
>gi|195584911|ref|XP_002082247.1| GD25314 [Drosophila simulans]
gi|194194256|gb|EDX07832.1| GD25314 [Drosophila simulans]
Length = 388
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 87/165 (52%), Gaps = 19/165 (11%)
Query: 118 DGKKLEPES----NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQY 173
D ++ PE+ ++LL +I N Y +T+DVLH + GPV +I +F KN G+QA++++
Sbjct: 68 DLRRKRPETTRPNHILLFTIINPFYPITVDVLHKICHPHGPVLRIVIFKKN-GVQAMVEF 126
Query: 174 PDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNN-DRSRDYTLPSTPMVNSQ 232
++ A A+E L G IY G C L I Y++ L++ N D S DYTL + + S
Sbjct: 127 DNLDAATRARENLNGADIY-AGCCTLKIDYAKPEKLNVYKNEPDTSWDYTLSTGKSLFSI 185
Query: 233 PS---ILGQQPVPMVGATANQYNGAQFAPPPPEQPMMHQPTAAGW 274
P +L QP P++G GA F PP P H T W
Sbjct: 186 PENVVMLESQP-PLLGP------GAAF--PPFGAPEYHTTTPENW 221
Score = 41.6 bits (96), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 21 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 80
G V +I F+K G QA+V+F + + A+ A+ L+G I G CTL+I Y+
Sbjct: 107 GPVLRIVIFKKN-GVQAMVEFDNLDAATRARENLNGADI-------YAGCCTLKIDYAKP 158
Query: 81 TDLSV-KFQSHRSRDYT 96
L+V K + S DYT
Sbjct: 159 EKLNVYKNEPDTSWDYT 175
>gi|348538507|ref|XP_003456732.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L [Oreochromis
niloticus]
Length = 556
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 71/126 (56%), Gaps = 2/126 (1%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VLL SI+N Y +T DVL+ V + G V +I +F +N G+QA++++ VQ A AK A
Sbjct: 177 NKVLLLSIQNPLYPITTDVLYTVCNPIGSVLRIVIFKRN-GIQAMVEFESVQCAQKAKAA 235
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 245
L G IY G C L I Y+R T L++ N++ S DYT P + G+Q ++G
Sbjct: 236 LNGADIY-AGCCTLKIEYARPTRLNVIKNDNESWDYTKPYLVRRDVHNRGKGRQRQAILG 294
Query: 246 ATANQY 251
+ Y
Sbjct: 295 EHPSSY 300
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 46/88 (52%), Gaps = 8/88 (9%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCT 72
+ V + G V +I F++ G QA+V+F + A AK AL+G I G CT
Sbjct: 196 LYTVCNPIGSVLRIVIFKRN-GIQAMVEFESVQCAQKAKAALNGADI-------YAGCCT 247
Query: 73 LRITYSAHTDLSVKFQSHRSRDYTNPYL 100
L+I Y+ T L+V + S DYT PYL
Sbjct: 248 LKIEYARPTRLNVIKNDNESWDYTKPYL 275
>gi|74194841|dbj|BAE26011.1| unnamed protein product [Mus musculus]
Length = 592
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 84/155 (54%), Gaps = 14/155 (9%)
Query: 99 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 156
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 129 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 188
Query: 157 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 216
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 189 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 246
Query: 217 RSRDYTLPS-----TPMVN-----SQPSILGQQPV 241
+ DYT P+ P N QP +LG P
Sbjct: 247 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPA 281
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 3 LTLSLLKVIF------ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDG 56
L ++L I+ + + + G V +I F K G QA+V+F ++A AK +L+G
Sbjct: 161 LLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNG 219
Query: 57 RSIPRYLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
I G CTL+I Y+ T L+V + DYTNP L
Sbjct: 220 ADI-------YSGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPNL 256
>gi|386768309|ref|NP_001246425.1| smooth, isoform L [Drosophila melanogaster]
gi|383302597|gb|AFH08178.1| smooth, isoform L [Drosophila melanogaster]
Length = 492
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 87/165 (52%), Gaps = 18/165 (10%)
Query: 118 DGKKLEPES----NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQY 173
D ++ PE+ ++LL +I N Y +T+DVLH + G V +I +F KN G+QA++++
Sbjct: 68 DLRRKRPETTRPNHILLFTIINPFYPITVDVLHKICHPHGQVLRIVIFKKN-GVQAMVEF 126
Query: 174 PDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNN-DRSRDYTLPSTPMVNSQ 232
++ A A+E L G IY G C L I Y++ L++ N D S DYTL + + +
Sbjct: 127 DNLDAATRARENLNGADIY-AGCCTLKIDYAKPEKLNVYKNEPDTSWDYTLSTVKEIGNG 185
Query: 233 PSILGQQPV---PMVGATANQYNGAQFAPPPPEQPMMHQPTAAGW 274
S L Q+P+ P++G GA F PP P H T W
Sbjct: 186 RSPLLQEPLYEPPLLGP------GAAF--PPFGAPEYHTTTPENW 222
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 21 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 80
G V +I F+K G QA+V+F + + A+ A+ L+G I G CTL+I Y+
Sbjct: 107 GQVLRIVIFKKN-GVQAMVEFDNLDAATRARENLNGADI-------YAGCCTLKIDYAKP 158
Query: 81 TDLSV-KFQSHRSRDYT 96
L+V K + S DYT
Sbjct: 159 EKLNVYKNEPDTSWDYT 175
>gi|26330256|dbj|BAC28858.1| unnamed protein product [Mus musculus]
Length = 326
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 63/99 (63%), Gaps = 2/99 (2%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 215 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 273
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP 224
L G IY G C L I Y+R T L++ N++ S DYT P
Sbjct: 274 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYTKP 311
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + V + G V +I F++ G QA+V+F A AK AL+G I
Sbjct: 229 ITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAALNGADI-------Y 280
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
G CTL+I Y+ T L+V + S DYT PYL
Sbjct: 281 AGCCTLKIEYARPTRLNVIRNDNDSWDYTKPYL 313
>gi|348522989|ref|XP_003449006.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 2
[Oreochromis niloticus]
Length = 492
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 85/162 (52%), Gaps = 19/162 (11%)
Query: 66 ENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPE 125
E+M + +TY+A + Y+ P+ I+ S + G +
Sbjct: 81 EDMNGSSTAVTYAADNQV---------------YIAGHPAFINYSTSQKISRPGDSDDSR 125
Query: 126 S--NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAK 183
+ NVLL +I N Y +T DVL+ + + GPVQ+I +F KN G+QA++++ VQ+A AK
Sbjct: 126 TVNNVLLFTIMNPIYPITTDVLYTICNNCGPVQRIVIFRKN-GVQAMVEFDSVQSAQRAK 184
Query: 184 EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 225
+L G IY G C L I Y++ T L++ N+ + DYT P+
Sbjct: 185 ASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPN 225
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 21 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 80
G V +I F K G QA+V+F ++A AK +L+G I G CTL+I Y+
Sbjct: 155 GPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIYS-------GCCTLKIEYAKP 206
Query: 81 TDLSVKFQSHRSRDYTNPYL 100
T L+V + DYTNP L
Sbjct: 207 TRLNVFKNDQDTWDYTNPNL 226
>gi|302821012|ref|XP_002992171.1| hypothetical protein SELMODRAFT_44533 [Selaginella moellendorffii]
gi|300140097|gb|EFJ06826.1| hypothetical protein SELMODRAFT_44533 [Selaginella moellendorffii]
Length = 414
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 123 EPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGL-QALIQYPDVQTAVV 181
E S +LL ++ + VT+D LH F +FGP++KIA+F ++ L QALIQY + A
Sbjct: 88 ETCSAILLVTMLDSVCHVTVDALHQTFKSFGPIEKIAIFPQSTVLAQALIQYASPRDARE 147
Query: 182 AKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILG 237
AK L I +G C + I YSR ++ + NND SRD+T S P PSILG
Sbjct: 148 AKHRLHKSKILNGS-CTMEIQYSRTDEVRVACNNDLSRDFTNSSLPSARF-PSILG 201
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 97/216 (44%), Gaps = 37/216 (17%)
Query: 15 QVFSAFGFVHKITTF-EKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTL 73
Q F +FG + KI F + T QAL+Q++ A AK+ L I G CT+
Sbjct: 112 QTFKSFGPIEKIAIFPQSTVLAQALIQYASPRDAREAKHRLHKSKILN-------GSCTM 164
Query: 74 RITYSAHTDLSVKFQSHRSRDYTNPYLPVA--PSAIDASGQLSVGLDGKKLE-------- 123
I YS ++ V + SRD+TN LP A PS + A G + + G +
Sbjct: 165 EIQYSRTDEVRVACNNDLSRDFTNSSLPSARFPSILGA-GNVHLMKPGVRCRYRPGNSGL 223
Query: 124 ----PESN---VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQ---ALIQY 173
P +N VLL S N + + L+ +FS +G V +I K ++ AL+Q
Sbjct: 224 LPSGPTTNQRCVLLLSNLNTRM-INEHKLYNLFSVYGNVLRI----KGSFVKPELALVQM 278
Query: 174 PDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDL 209
D A +A L+G ++ K+ I+ S H+ L
Sbjct: 279 SDGFQADLAMACLKGVSLFGK---KMEITLSDHSCL 311
>gi|253723235|pdb|2E5I|A Chain A, Solution Structure Of Rna Binding Domain 2 In
Heterogeneous Nuclear Ribonucleoprotein L-Like
Length = 124
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 63/99 (63%), Gaps = 2/99 (2%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 23 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 81
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP 224
L G IY G C L I Y+R T L++ N++ S DYT P
Sbjct: 82 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYTKP 119
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + V + G V +I F++ G QA+V+F A AK AL+G I
Sbjct: 37 ITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAALNGADIY------- 88
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
G CTL+I Y+ T L+V + S DYT PYL
Sbjct: 89 AGCCTLKIEYARPTRLNVIRNDNDSWDYTKPYL 121
>gi|47087069|ref|NP_998548.1| heterogeneous nuclear ribonucleoprotein L2 [Danio rerio]
gi|32451940|gb|AAH54655.1| Heterogeneous nuclear ribonucleoprotein L [Danio rerio]
gi|182891832|gb|AAI65353.1| Hnrnpl protein [Danio rerio]
Length = 481
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 65/100 (65%), Gaps = 2/100 (2%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+NVLL +I N Y +T DVL+ + + GPVQ+I +F KN G+QA++++ VQ+A AK +
Sbjct: 132 NNVLLLTIMNPIYPITSDVLYTICNNCGPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKAS 190
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 225
L G IY G C L I Y++ T L++ N+ + DYT PS
Sbjct: 191 LNGADIY-SGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPS 229
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 52/104 (50%), Gaps = 14/104 (13%)
Query: 3 LTLSLLKVIF------ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDG 56
L L+++ I+ + + + G V +I F K G QA+V+F ++A AK +L+G
Sbjct: 135 LLLTIMNPIYPITSDVLYTICNNCGPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNG 193
Query: 57 RSIPRYLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
I G CTL+I Y+ T L+V + DYTNP L
Sbjct: 194 ADIYS-------GCCTLKIEYAKPTRLNVFKNDQDTWDYTNPSL 230
>gi|440910313|gb|ELR60121.1| Heterogeneous nuclear ribonucleoprotein L, partial [Bos grunniens
mutus]
Length = 512
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 92/179 (51%), Gaps = 18/179 (10%)
Query: 99 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 156
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 85 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 144
Query: 157 KIAMFDKNGGLQALIQYPDV-QTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNN 215
+I +F KN G+QA+++YP + A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 145 RIVIFRKN-GVQAMVEYPLLGNGAQRAKASLNGADIYS-GCCTLKIEYAKPTRLNVFKND 202
Query: 216 DRSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 261
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 203 QDTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 261
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 9/81 (11%)
Query: 21 GFVHKITTFEKTAGFQALVQFSDT-ETASSAKNALDGRSIPRYLLPENMGPCTLRITYSA 79
G V +I F K G QA+V++ A AK +L+G I G CTL+I Y+
Sbjct: 141 GPVQRIVIFRKN-GVQAMVEYPLLGNGAQRAKASLNGADI-------YSGCCTLKIEYAK 192
Query: 80 HTDLSVKFQSHRSRDYTNPYL 100
T L+V + DYTNP L
Sbjct: 193 PTRLNVFKNDQDTWDYTNPNL 213
>gi|410035018|ref|XP_003949838.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Pan
troglodytes]
Length = 513
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 93/185 (50%), Gaps = 28/185 (15%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ + V A AK A
Sbjct: 161 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAA 219
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 245
L G IY G C L I Y+R T L++ N++ S DYT P S +L P+P
Sbjct: 220 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYTKPYLGRRGSHGPLL---PLP--- 272
Query: 246 ATANQYN-GAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMPMMGNHPYMPPGSMPMGPGM 304
++Y G++ P P+ P AS S GN P GS+ M G+
Sbjct: 273 ---SRYRMGSRDTPELVAYPL------------PQASSSYMHGGN----PSGSVVMVSGL 313
Query: 305 MQMHM 309
Q+ M
Sbjct: 314 HQLKM 318
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + V + G V +I F++ G QA++ F A AK AL+G I
Sbjct: 175 ITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAALNGADI-------Y 226
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
G CTL+I Y+ T L+V + S DYT PYL
Sbjct: 227 AGCCTLKIEYARPTRLNVIRNDNDSWDYTKPYL 259
>gi|417398360|gb|JAA46213.1| Putative heteroproteinous nuclear ribonucleoprotein l [Desmodus
rotundus]
Length = 285
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 63/99 (63%), Gaps = 2/99 (2%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 166 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 224
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP 224
L G IY G C L I Y+R T L++ N++ S DYT P
Sbjct: 225 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYTKP 262
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + V + G V +I F++ G QA+V+F A AK AL+G I
Sbjct: 180 ITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAALNGADI-------Y 231
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
G CTL+I Y+ T L+V + S DYT PYL
Sbjct: 232 AGCCTLKIEYARPTRLNVIRNDNDSWDYTKPYL 264
>gi|25988650|gb|AAN76190.1| BLOCK24 variant [Homo sapiens]
Length = 262
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 63/99 (63%), Gaps = 2/99 (2%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 161 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 219
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP 224
L G IY G C L I Y+R T L++ N++ S DYT P
Sbjct: 220 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYTKP 257
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + V + G V +I F++ G QA+V+F A AK AL+G I
Sbjct: 175 ITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAALNGADI-------Y 226
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
G CTL+I Y+ T L+V + S DYT PYL
Sbjct: 227 AGCCTLKIEYARPTRLNVIRNDNDSWDYTKPYL 259
>gi|74222755|dbj|BAE42243.1| unnamed protein product [Mus musculus]
Length = 172
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 63/99 (63%), Gaps = 2/99 (2%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 61 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 119
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP 224
L G IY G C L I Y+R T L++ N++ S DYT P
Sbjct: 120 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYTKP 157
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + V + G V +I F++ G QA+V+F A AK AL+G I
Sbjct: 75 ITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAALNGADIY------- 126
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
G CTL+I Y+ T L+V + S DYT PYL
Sbjct: 127 AGCCTLKIEYARPTRLNVIRNDNDSWDYTKPYL 159
>gi|52545658|emb|CAH56358.1| hypothetical protein [Homo sapiens]
Length = 216
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 63/99 (63%), Gaps = 2/99 (2%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 100 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 158
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP 224
L G IY G C L I Y+R T L++ N++ S DYT P
Sbjct: 159 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYTKP 196
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + V + G V +I F++ G QA+V+F A AK AL+G I
Sbjct: 114 ITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAALNGADI-------Y 165
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
G CTL+I Y+ T L+V + S DYT PYL
Sbjct: 166 AGCCTLKIEYARPTRLNVIRNDNDSWDYTKPYL 198
>gi|188528957|ref|NP_001120904.1| heterogeneous nuclear ribonucleoprotein L-like [Xenopus (Silurana)
tropicalis]
gi|183986223|gb|AAI66362.1| hnrpll protein [Xenopus (Silurana) tropicalis]
Length = 531
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 97/189 (51%), Gaps = 12/189 (6%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VLL SI+N Y +T+DVL+ V + G V++I +F +N G+QA++++ V +A AK +
Sbjct: 155 NKVLLLSIQNPLYPITVDVLYSVCNPVGKVERIVIFKRN-GIQAMVEFDSVHSAQKAKSS 213
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 245
L G IY G C L I Y+R T L++ N++ S DY S P ++ + G+Q ++G
Sbjct: 214 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDY---SKPYLSRRDRGKGRQRQAILG 269
Query: 246 A--TANQYNG-AQFAP--PPPEQPMMHQPTAAGWGAVPPASQSMPMMGNHPYMPPGSMPM 300
++ +Y+G P P P M A P S M P P GS+ M
Sbjct: 270 DHPSSYRYDGYGNHGPLLPLPNLYRMGSRDTPELVAYPLPQASSSYMHGGP--PVGSVAM 327
Query: 301 GPGMMQMHM 309
G+ Q M
Sbjct: 328 VSGLHQQKM 336
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 8/93 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + V + G V +I F++ G QA+V+F +A AK++L+G I
Sbjct: 169 ITVDVLYSVCNPVGKVERIVIFKRN-GIQAMVEFDSVHSAQKAKSSLNGADI-------Y 220
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
G CTL+I Y+ T L+V + S DY+ PYL
Sbjct: 221 AGCCTLKIEYARPTRLNVIRNDNDSWDYSKPYL 253
>gi|402890610|ref|XP_003908576.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 3
[Papio anubis]
Length = 413
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 93/185 (50%), Gaps = 28/185 (15%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ + V A AK A
Sbjct: 61 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAA 119
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 245
L G IY G C L I Y+R T L++ N++ S DYT P S +L P+P
Sbjct: 120 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYTKPYLGRRGSHGPLL---PLP--- 172
Query: 246 ATANQYN-GAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMPMMGNHPYMPPGSMPMGPGM 304
++Y G++ P P+ P AS S GN P GS+ M G+
Sbjct: 173 ---SRYRMGSRDTPELVAYPL------------PQASSSYMHGGN----PSGSVVMVSGL 213
Query: 305 MQMHM 309
Q+ M
Sbjct: 214 HQLKM 218
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + V + G V +I F++ G QA++ F A AK AL+G I
Sbjct: 75 ITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAALNGADI-------Y 126
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
G CTL+I Y+ T L+V + S DYT PYL
Sbjct: 127 AGCCTLKIEYARPTRLNVIRNDNDSWDYTKPYL 159
>gi|31416927|gb|AAH08217.2| HNRPLL protein [Homo sapiens]
Length = 275
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 63/99 (63%), Gaps = 2/99 (2%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 161 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 219
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP 224
L G IY G C L I Y+R T L++ N++ S DYT P
Sbjct: 220 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYTKP 257
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + V + G V +I F++ G QA+V+F A AK AL+G I
Sbjct: 175 ITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAALNGADI-------Y 226
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
G CTL+I Y+ T L+V + S DYT PYL
Sbjct: 227 AGCCTLKIEYARPTRLNVIRNDNDSWDYTKPYL 259
>gi|345311818|ref|XP_003429156.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L
[Ornithorhynchus anatinus]
Length = 693
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 66/100 (66%), Gaps = 2/100 (2%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
++VLL +I N Y++T DVL+ + + GPVQ+I +F KN G+QA++++ VQ+A AK +
Sbjct: 106 NSVLLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKAS 164
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 225
L G IY G C L I Y++ T L++ N+ + DYT P+
Sbjct: 165 LNGADIYS-GCCTLKIEYAKPTRLNVFKNDQDTWDYTNPN 203
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 21 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 80
G V +I F K G QA+V+F ++A AK +L+G I G CTL+I Y+
Sbjct: 133 GPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADI-------YSGCCTLKIEYAKP 184
Query: 81 TDLSVKFQSHRSRDYTNPYL 100
T L+V + DYTNP L
Sbjct: 185 TRLNVFKNDQDTWDYTNPNL 204
>gi|221126625|ref|XP_002156158.1| PREDICTED: polypyrimidine tract-binding protein 3-like [Hydra
magnipapillata]
Length = 494
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 58/98 (59%), Gaps = 3/98 (3%)
Query: 128 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 187
VL + N+ Y VT+DVL VF G +QK+ F +N ALIQY + + A AK +
Sbjct: 135 VLKVIVTNIIYPVTIDVLQQVFQRCGEIQKVVTFIRNDQFHALIQYSNSKEASAAKVLFD 194
Query: 188 GHCIYDGGFCK-LHISYSRHTDLSIKVNNDRSRDYTLP 224
IY+G C LH+ +S+ ++L +K NN++ RD+T P
Sbjct: 195 KQNIYNG--CNTLHVEFSKMSELVVKFNNEKMRDFTKP 230
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 112/250 (44%), Gaps = 55/250 (22%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
QVF G + K+ TF + F AL+Q+S+++ AS+AK D ++I G TL
Sbjct: 154 QVFQRCGEIQKVVTFIRNDQFHALIQYSNSKEASAAKVLFDKQNIYN-------GCNTLH 206
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNP------YLPVAPSAIDAS---GQLSV---------- 115
+ +S ++L VKF + + RD+T P L V A+ A G L V
Sbjct: 207 VEFSKMSELVVKFNNEKMRDFTKPDKSNYDNLNVQLQAMQAQMNPGMLPVPSSFPPQLFT 266
Query: 116 -GLDG--------KKLEPESN-------------VLLASIENMQYAVTLDVLHMVFSAFG 153
G + L P +N VLL S N + ++ D L ++F +G
Sbjct: 267 QGFNFGGGFPNMMGSLSPNNNFNQNIGGGNRQVSVLLVSNLN-ENEISCDDLFILFGHYG 325
Query: 154 PVQKIA-MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIK 212
V ++ +F+K ALIQ+ D Q A A + L ++ ++ +S S+H + +
Sbjct: 326 DVLRVKILFNKKDT--ALIQFADAQQASTALQNLNNVTLFGN---EMRVSRSKHDYVHMP 380
Query: 213 VNNDRSRDYT 222
++D ++ T
Sbjct: 381 KSDDEGKELT 390
>gi|221058202|ref|XP_002261609.1| polypyrimidine tract binding protein [Plasmodium knowlesi strain H]
gi|194247614|emb|CAQ41014.1| polypyrimidine tract binding protein, putative [Plasmodium knowlesi
strain H]
Length = 663
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 73/132 (55%), Gaps = 8/132 (6%)
Query: 104 PSAIDA--SGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMF 161
PS DA G + G K S V+L S+ N+ Y V +D+++ +FS GPV+KI F
Sbjct: 294 PSTKDALEGGNIKKGKHNK--NESSRVILVSVLNLHYPVDIDLIYYLFSKCGPVEKIIAF 351
Query: 162 DKNGGL-QALIQYPDVQTAVVAKEALEGHCIYDGGFCK-LHISYSRHTDLSIKVNNDRSR 219
+N + QAL+Q+ +++TA A + L IYDG C + I YS +L++K NN SR
Sbjct: 352 SRNPLIYQALVQFQNIETAQEAIKTLHNRNIYDG--CNTIQIQYSFLKELNVKANNSSSR 409
Query: 220 DYTLPSTPMVNS 231
DYT N+
Sbjct: 410 DYTTTDVSKNNN 421
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 102/234 (43%), Gaps = 48/234 (20%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKT-AGFQALVQFSDTETASSAKNALDGRSIPRYLLPE 66
+ + I +FS G V KI F + +QALVQF + ETA A L R+I
Sbjct: 330 VDIDLIYYLFSKCGPVEKIIAFSRNPLIYQALVQFQNIETAQEAIKTLHNRNIYD----- 384
Query: 67 NMGPCTLRITYSAHTDLSVKFQSHRSRDYT--------NP--------YLPVAPSAIDAS 110
G T++I YS +L+VK + SRDYT NP LP P+
Sbjct: 385 --GCNTIQIQYSFLKELNVKANNSSSRDYTTTDVSKNNNPVNIQTSHGVLP-TPTQKGND 441
Query: 111 GQLSVGLDGK--------KLEPESNVLLASIENMQYAVTLDV-----LHMVFSAFGPVQK 157
+L + L+ K K ++ VL+ Y + D L +FS +G V +
Sbjct: 442 SELYLILERKFKLVDFDAKNASKTPVLIC------YNIAKDYTDVHKLFNLFSVYGFVSR 495
Query: 158 IAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 211
I + + ALIQY A VA+E L+ H DG L I++S+ D+ I
Sbjct: 496 IKILREKPDC-ALIQYAGHLFASVAQECLQ-HSKIDGQV--LEINFSKILDIRI 545
>gi|339254278|ref|XP_003372362.1| hypothetical protein Tsp_10607 [Trichinella spiralis]
gi|316967236|gb|EFV51693.1| hypothetical protein Tsp_10607 [Trichinella spiralis]
Length = 235
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 53/87 (60%), Gaps = 7/87 (8%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
QVF FG V +I F K FQAL+QF D +A +AK ALDG+ P G CTL+
Sbjct: 15 QVFVTFGTVLRIIIFHKNNNFQALIQFLDPISAYAAKMALDGK-------PLINGCCTLK 67
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLP 101
I +S L+VK+ + +SRD+TNP LP
Sbjct: 68 IEFSKLATLNVKYNNEKSRDFTNPNLP 94
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Query: 148 VFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHT 207
VF FG V +I +F KN QALIQ+ D +A AK AL+G + +G C L I +S+
Sbjct: 16 VFVTFGTVLRIIIFHKNNNFQALIQFLDPISAYAAKMALDGKPLINGC-CTLKIEFSKLA 74
Query: 208 DLSIKVNNDRSRDYTLPSTP 227
L++K NN++SRD+T P+ P
Sbjct: 75 TLNVKYNNEKSRDFTNPNLP 94
>gi|302791034|ref|XP_002977284.1| hypothetical protein SELMODRAFT_54589 [Selaginella moellendorffii]
gi|300155260|gb|EFJ21893.1| hypothetical protein SELMODRAFT_54589 [Selaginella moellendorffii]
Length = 414
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 123 EPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGL-QALIQYPDVQTAVV 181
E S +LL ++ + VT+D LH F +FGP++KIA+F ++ L QALIQY + A
Sbjct: 88 ETCSPILLVTMLDSVCHVTVDALHQTFKSFGPIEKIAIFPQSTVLAQALIQYASPRDARE 147
Query: 182 AKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILG 237
AK L I +G C + I YSR ++ + NND SRD+T S P PSILG
Sbjct: 148 AKHRLHKSKILNGS-CTMEIQYSRTDEVRVACNNDLSRDFTNSSLPSARF-PSILG 201
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 96/216 (44%), Gaps = 37/216 (17%)
Query: 15 QVFSAFGFVHKITTF-EKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTL 73
Q F +FG + KI F + T QAL+Q++ A AK+ L I G CT+
Sbjct: 112 QTFKSFGPIEKIAIFPQSTVLAQALIQYASPRDAREAKHRLHKSKILN-------GSCTM 164
Query: 74 RITYSAHTDLSVKFQSHRSRDYTNPYLPVA--PSAIDASGQLSVGLDGKKLE-------- 123
I YS ++ V + SRD+TN LP A PS + A G + G +
Sbjct: 165 EIQYSRTDEVRVACNNDLSRDFTNSSLPSARFPSILGA-GNAHLMKPGVRCRYRPGNSGL 223
Query: 124 ----PESN---VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQ---ALIQY 173
P +N VLL S N + + L+ +FS +G V +I K ++ AL+Q
Sbjct: 224 LPSGPTTNQRCVLLLSNLNTRM-INEHKLYNLFSVYGNVLRI----KGSFVKPELALVQM 278
Query: 174 PDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDL 209
D A +A L+G ++ K+ I+ S H+ L
Sbjct: 279 SDGFQADLAMACLKGVSLFGK---KMEITLSDHSCL 311
>gi|340375987|ref|XP_003386515.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like
[Amphimedon queenslandica]
Length = 449
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 85/155 (54%), Gaps = 6/155 (3%)
Query: 124 PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAK 183
PE+++LL +I N Y +T+DV+ + + +G VQ+I +F KN GLQ L+++ +A AK
Sbjct: 145 PENHILLFTIFNPLYPITVDVIRTICTPYGFVQRIVIFRKN-GLQVLVEFDSNHSAQRAK 203
Query: 184 EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPM 243
+ L+G IY G C L I ++R L++ N+D + DYT+ + ++ P + P+
Sbjct: 204 QQLDGADIY-AGCCTLKIEFARTNKLNVFKNDDMTCDYTVQGQRLQSNFPRV---PPMQQ 259
Query: 244 VGATANQYNGAQFAPPPPEQ-PMMHQPTAAGWGAV 277
++ + +AP P P + AG G+V
Sbjct: 260 QQQQMRPFSTSPYAPQPTNSAPFVGTQAVAGSGSV 294
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V I + + +GFV +I F K G Q LV+F +A AK LDG I
Sbjct: 161 ITVDVIRTICTPYGFVQRIVIFRKN-GLQVLVEFDSNHSAQRAKQQLDGADI-------Y 212
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYT 96
G CTL+I ++ L+V + DYT
Sbjct: 213 AGCCTLKIEFARTNKLNVFKNDDMTCDYT 241
>gi|340708741|ref|XP_003392980.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Bombus
terrestris]
Length = 479
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 65/100 (65%), Gaps = 2/100 (2%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
++VLL +I N Y +T++VLH + + G VQ+I +F KN G+QA++++ V++A AKE
Sbjct: 43 NHVLLFTIINPVYPITVEVLHAISAPSGQVQRIVIFKKN-GVQAMVEFDTVESATRAKET 101
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 225
L G IY G C L I +++ T L++ N+ S DYT P+
Sbjct: 102 LHGADIYS-GCCTLKIDFAKPTKLNVYKNDAESWDYTTPT 140
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 51/104 (49%), Gaps = 9/104 (8%)
Query: 10 VIFILQVFSA-FGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENM 68
+ +L SA G V +I F+K G QA+V+F E+A+ AK L G I
Sbjct: 58 TVEVLHAISAPSGQVQRIVIFKKN-GVQAMVEFDTVESATRAKETLHGADI-------YS 109
Query: 69 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQ 112
G CTL+I ++ T L+V S DYT P L + DA+G
Sbjct: 110 GCCTLKIDFAKPTKLNVYKNDAESWDYTTPTLGSSAHKNDATGN 153
>gi|290993108|ref|XP_002679175.1| predicted protein [Naegleria gruberi]
gi|284092791|gb|EFC46431.1| predicted protein [Naegleria gruberi]
Length = 482
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 93/192 (48%), Gaps = 28/192 (14%)
Query: 36 QALVQFSDTETASSAKNALDGR-SIPRYLLPENMGPCTLRITYSAHTDLSVKFQSHRSRD 94
Q LVQF++ + A S + + P +++ + + YS+HT+LS S
Sbjct: 57 QGLVQFAEVDGAISLIESFNNNPDSPSFVIRD----TKVYPNYSSHTELSKGLISKSDNG 112
Query: 95 YTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGP 154
N +GK+ +P +L+ ++ V +D LH +FS G
Sbjct: 113 LAN--------------------NGKQQDPNHILLVTISKSKSTDVNIDSLHEIFSLKGS 152
Query: 155 --VQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIK 212
++KI MF+K GLQALIQY +V A+ A++ L+G + L I +S DL++
Sbjct: 153 CSIEKIVMFNKTAGLQALIQYKNVNDALEARKKLQGETPFSTS-ENLLIQFSNLKDLTVH 211
Query: 213 VNNDRSRDYTLP 224
N+D++RDYT P
Sbjct: 212 QNSDKARDYTKP 223
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 108/225 (48%), Gaps = 31/225 (13%)
Query: 15 QVFSAFGF--VHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCT 72
++FS G + KI F KTAG QAL+Q+ + A A+ L G + P + EN
Sbjct: 145 EIFSLKGSCSIEKIVMFNKTAGLQALIQYKNVNDALEARKKLQGET-P-FSTSEN----- 197
Query: 73 LRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQ------------LSVGLDGK 120
L I +S DL+V S ++RDYT P P P + +S +S L
Sbjct: 198 LLIQFSNLKDLTVHQNSDKARDYTKP--PQQPQSSVSSPTTTNTTNSTNTVAVSSTLPST 255
Query: 121 KLEPES---NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 177
P + +LL S N + + D+L +FS +G + +I +F K AL+Q +
Sbjct: 256 NNAPTTVMKRILLVSNFNDK-KMNCDLLFNLFSCYGYIHRIKIF-KTKPDHALVQMASHK 313
Query: 178 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 222
A+ A +L+G I+ L +++S+HT ++ +++ +D+T
Sbjct: 314 QALNAISSLKGVQIFGKT---LSVNFSKHTFINTNKSDNNMKDFT 355
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 84/190 (44%), Gaps = 20/190 (10%)
Query: 12 FILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPC 71
+ +FS +G++H+I F KT ALVQ + + A +A ++L G I G
Sbjct: 281 LLFNLFSCYGYIHRIKIF-KTKPDHALVQMASHKQALNAISSLKGVQI--------FGK- 330
Query: 72 TLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDAS-------GQLSVGLDGKKL-- 122
TL + +S HT ++ + +D+T L P S L+ G KL
Sbjct: 331 TLSVNFSKHTFINTNKSDNNMKDFTKTNLNRFPRGASTSQTSPSSNNSLTNGKQHNKLYM 390
Query: 123 -EPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 181
+P + ++++ + ++L +FS FG ++ + +F N ALI++ + +A
Sbjct: 391 CQPTHTLHISNVPFEKDEKGKEILTNIFSQFGEIEGLRVFRHNDKPMALIKFKTITSAAE 450
Query: 182 AKEALEGHCI 191
A L I
Sbjct: 451 ALATLHNETI 460
>gi|350413134|ref|XP_003489890.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Bombus
impatiens]
Length = 479
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 65/100 (65%), Gaps = 2/100 (2%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
++VLL +I N Y +T++VLH + + G VQ+I +F KN G+QA++++ V++A AKE
Sbjct: 43 NHVLLFTIINPVYPITVEVLHAISAPSGQVQRIVIFKKN-GVQAMVEFDTVESATRAKET 101
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 225
L G IY G C L I +++ T L++ N+ S DYT P+
Sbjct: 102 LHGADIYS-GCCTLKIDFAKPTKLNVYKNDAESWDYTTPT 140
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 51/104 (49%), Gaps = 9/104 (8%)
Query: 10 VIFILQVFSA-FGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENM 68
+ +L SA G V +I F+K G QA+V+F E+A+ AK L G I
Sbjct: 58 TVEVLHAISAPSGQVQRIVIFKKN-GVQAMVEFDTVESATRAKETLHGADI-------YS 109
Query: 69 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQ 112
G CTL+I ++ T L+V S DYT P L + DA+G
Sbjct: 110 GCCTLKIDFAKPTKLNVYKNDAESWDYTTPTLGSSAHKNDATGN 153
>gi|354488933|ref|XP_003506620.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L [Cricetulus
griseus]
Length = 576
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 96/197 (48%), Gaps = 21/197 (10%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYP-------DVQT 178
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA+++YP V
Sbjct: 193 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEYPLFSFRFESVLC 251
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 238
A AK AL G IY G C L I Y+R T L++ N++ S DYT P + + G+
Sbjct: 252 AQKAKAALNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGR 307
Query: 239 QPVPMVGATANQYNGAQFAP-----PPPEQPMMHQPTAAGWGAVP-PASQSMPMMGNHPY 292
Q ++G + + + P P + M A P P + S M G
Sbjct: 308 QRQAILGDHPSSFRHDGYGSHGPLLPLPSRYRMGSRDTPELVAYPLPQASSSYMHGGS-- 365
Query: 293 MPPGSMPMGPGMMQMHM 309
P GS+ M G+ Q+ M
Sbjct: 366 -PSGSVVMVSGLHQLKM 381
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 47/100 (47%), Gaps = 15/100 (15%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQ-------FSDTETASSAKNALDGRSIP 60
+ V + V + G V +I F++ G QA+V+ F A AK AL+G I
Sbjct: 207 ITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEYPLFSFRFESVLCAQKAKAALNGADI- 264
Query: 61 RYLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
G CTL+I Y+ T L+V + S DYT PYL
Sbjct: 265 ------YAGCCTLKIEYARPTRLNVIRNDNDSWDYTKPYL 298
>gi|358338430|dbj|GAA56814.1| heterogeneous nuclear ribonucleoprotein L [Clonorchis sinensis]
Length = 873
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 101/221 (45%), Gaps = 39/221 (17%)
Query: 11 IFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGP 70
IF+L+ F +G + +T + QAL++F+D +A SA + +P +
Sbjct: 363 IFLLRTFEQYGPIKDVTMMPQRG--QALIEFADISSAESA-------VVRCSEIPLTIAN 413
Query: 71 CTLRITYSAHTDLSVK-FQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVL 129
+R+ YS + + RDY++ L ES VL
Sbjct: 414 HRVRVNYSTSKRIVQRQLGGESGRDYSDGPL------------------------ESRVL 449
Query: 130 LASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGH 189
L +I N QY +T+DV+H + S G V +I +F K +QA++++ + A AK L G
Sbjct: 450 LFTIYNAQYPITVDVIHQITSRHGRVLRIVIFRKT-HVQAMVEFKNTDDARNAKRNLNGA 508
Query: 190 CIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT---LPSTP 227
IY G C L I ++R L++ N+ + DY LP+ P
Sbjct: 509 DIY-SGCCTLKIEFARPARLTVLKNDQETWDYENSLLPTDP 548
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 58/114 (50%), Gaps = 9/114 (7%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V I Q+ S G V +I F KT QA+V+F +T+ A +AK L+G I
Sbjct: 460 ITVDVIHQITSRHGRVLRIVIFRKTH-VQAMVEFKNTDDARNAKRNLNGADI-------Y 511
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDAS-GQLSVGLDGK 120
G CTL+I ++ L+V + DY N LP P+ I S G+ +V L G+
Sbjct: 512 SGCCTLKIEFARPARLTVLKNDQETWDYENSLLPTDPARIRISDGRANVSLLGR 565
>gi|4929470|gb|AAD34009.1|AF148690_1 RNA-binding protein XlhnRNPL [Xenopus laevis]
Length = 273
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 79/133 (59%), Gaps = 10/133 (7%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+NVLL +I N Y++T DVL+ + + GPV++I +F KN G+QA++++ VQ+A AK +
Sbjct: 142 NNVLLLTILNPIYSITTDVLYTICNPCGPVERIVIFRKN-GVQAMVEFDSVQSAQRAKAS 200
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILG-----QQP 240
L G IY G C L I Y++ + L++ N+ + DYT P ++ Q + G Q+
Sbjct: 201 LNGADIY-SGCCTLKIEYAKPSRLNVFKNDQDTWDYT---NPCLSGQGDLGGNPNKRQRN 256
Query: 241 VPMVGATANQYNG 253
P++G +Y G
Sbjct: 257 PPLLGDHPAEYGG 269
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 52/104 (50%), Gaps = 14/104 (13%)
Query: 3 LTLSLLKVIF------ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDG 56
L L++L I+ + + + G V +I F K G QA+V+F ++A AK +L+G
Sbjct: 145 LLLTILNPIYSITTDVLYTICNPCGPVERIVIFRKN-GVQAMVEFDSVQSAQRAKASLNG 203
Query: 57 RSIPRYLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
I G CTL+I Y+ + L+V + DYTNP L
Sbjct: 204 ADI-------YSGCCTLKIEYAKPSRLNVFKNDQDTWDYTNPCL 240
>gi|328875343|gb|EGG23708.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 404
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 59/97 (60%), Gaps = 2/97 (2%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
SN+LL SI + ++ L+ + S +G V +I +F K G LQA +++ +A VAKEA
Sbjct: 49 SNILLCSILTPIFPISTSTLYTIMSPYGRVLRIVIFQKKG-LQAFVEFESPYSAWVAKEA 107
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 222
L G IY G C L I Y+R L++K N+D++ DYT
Sbjct: 108 LNGQDIYTGS-CTLQIDYARVATLNVKQNDDKTYDYT 143
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 114/268 (42%), Gaps = 66/268 (24%)
Query: 3 LTLSLLKVIF------ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDG 56
L S+L IF + + S +G V +I F+K G QA V+F +A AK AL+G
Sbjct: 52 LLCSILTPIFPISTSTLYTIMSPYGRVLRIVIFQK-KGLQAFVEFESPYSAWVAKEALNG 110
Query: 57 RSIPRYLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPY----LP----------- 101
+ I G CTL+I Y+ L+VK ++ DYT+ + LP
Sbjct: 111 QDI-------YTGSCTLQIDYARVATLNVKQNDDKTYDYTSEHPGFSLPSYSPFPQPGAP 163
Query: 102 -VAPSAIDAS------------------------GQLSVGLDGKKLEPESNVLLASIENM 136
V P+ +D + G S +EP S ++ + +
Sbjct: 164 GVHPAQLDPTYAKPAGPYMMMGQQAATTMGIPPYGMYSAAPGAMGIEPPSQTVIM-VHRL 222
Query: 137 QYAVTLDVLHMVFSAFGPVQKIAMFD--KNGGLQALIQYPDVQTAVVAKEALEGHCIYDG 194
+VT D L +F +G V KI M K+G A++Q D A A L G I+
Sbjct: 223 ADSVTSDQLFNLFCLYGNVIKIKMLQGAKSG---AMVQMGDGIQADTAIHCLNGASIFGQ 279
Query: 195 GFCKLHISYSRHTDLSIKVNNDRSRDYT 222
+L + +S+H +S +D+++D+T
Sbjct: 280 ---RLSVFHSKHPAIS---ESDKTKDFT 301
>gi|390341476|ref|XP_785931.3| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 2
[Strongylocentrotus purpuratus]
Length = 570
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 72/139 (51%), Gaps = 2/139 (1%)
Query: 104 PSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDK 163
P+ D S + G+ +NVLL ++ +Y +T DV+H + FG V +I +F K
Sbjct: 132 PAFFDYSNSARIIRPGENDSEANNVLLMTVVRPKYRITTDVIHTICKGFGNVLRIVIFKK 191
Query: 164 NGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTL 223
N G+QA++++ VQ+A AK+ L IY G C L I ++R L++ N+ + DYT
Sbjct: 192 N-GVQAMVEFDTVQSATHAKQNLHNCDIY-SGCCTLKIDFARPKTLTVYKNDGETYDYTN 249
Query: 224 PSTPMVNSQPSILGQQPVP 242
P ++L P P
Sbjct: 250 PGLNAAAQGRALLDDPPEP 268
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCT 72
I + FG V +I F+K G QA+V+F ++A+ AK L I G CT
Sbjct: 173 IHTICKGFGNVLRIVIFKKN-GVQAMVEFDTVQSATHAKQNLHNCDIYS-------GCCT 224
Query: 73 LRITYSAHTDLSVKFQSHRSRDYTNPYLPVA 103
L+I ++ L+V + DYTNP L A
Sbjct: 225 LKIDFARPKTLTVYKNDGETYDYTNPGLNAA 255
>gi|26351857|dbj|BAC39565.1| unnamed protein product [Mus musculus]
Length = 329
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 66/100 (66%), Gaps = 2/100 (2%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
++VLL +I N Y++T DVL+ + + GPVQ+I +F KN G+QA++++ VQ+A AK +
Sbjct: 158 NSVLLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKAS 216
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 225
L G IY G C L I Y++ T L++ N+ + DYT P+
Sbjct: 217 LNGADIY-SGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPN 255
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 21 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 80
G V +I F K G QA+V+F ++A AK +L+G I G CTL+I Y+
Sbjct: 185 GPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIYS-------GCCTLKIEYAKP 236
Query: 81 TDLSVKFQSHRSRDYTNPYL 100
T L+V + DYTNP L
Sbjct: 237 TRLNVFKNDQDTWDYTNPNL 256
>gi|354483412|ref|XP_003503887.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L [Cricetulus
griseus]
Length = 498
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 66/100 (66%), Gaps = 2/100 (2%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
++VLL +I N Y++T DVL+ + + GPVQ+I +F KN G+QA++++ VQ+A AK +
Sbjct: 147 NSVLLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKAS 205
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 225
L G IY G C L I Y++ T L++ N+ + DYT P+
Sbjct: 206 LNGADIY-SGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPN 244
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 21 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 80
G V +I F K G QA+V+F ++A AK +L+G I G CTL+I Y+
Sbjct: 174 GPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIYS-------GCCTLKIEYAKP 225
Query: 81 TDLSVKFQSHRSRDYTNPYL 100
T L+V + DYTNP L
Sbjct: 226 TRLNVFKNDQDTWDYTNPNL 245
>gi|194391004|dbj|BAG60620.1| unnamed protein product [Homo sapiens]
Length = 240
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 67/108 (62%), Gaps = 2/108 (1%)
Query: 118 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 177
D ++VLL +I N Y++T DVL+ + + GPVQ+I +F KN G+QA++++ VQ
Sbjct: 112 DSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKN-GVQAMVEFDSVQ 170
Query: 178 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 225
+A AK +L G IY G C L I Y++ T L++ N+ + DYT P+
Sbjct: 171 SAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPN 217
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 21 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 80
G V +I F K G QA+V+F ++A AK +L+G I G CTL+I Y+
Sbjct: 147 GPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIYS-------GCCTLKIEYAKP 198
Query: 81 TDLSVKFQSHRSRDYTNPYL 100
T L+V + DYTNP L
Sbjct: 199 TRLNVFKNDQDTWDYTNPNL 218
>gi|194375115|dbj|BAG62670.1| unnamed protein product [Homo sapiens]
Length = 179
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 67/108 (62%), Gaps = 2/108 (1%)
Query: 118 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 177
D ++VLL +I N Y++T DVL+ + + GPVQ+I +F KN G+QA++++ VQ
Sbjct: 51 DSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKN-GVQAMVEFDSVQ 109
Query: 178 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 225
+A AK +L G IY G C L I Y++ T L++ N+ + DYT P+
Sbjct: 110 SAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPN 156
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 21 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 80
G V +I F K G QA+V+F ++A AK +L+G I G CTL+I Y+
Sbjct: 86 GPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIYS-------GCCTLKIEYAKP 137
Query: 81 TDLSVKFQSHRSRDYTNPYL 100
T L+V + DYTNP L
Sbjct: 138 TRLNVFKNDQDTWDYTNPNL 157
>gi|256080365|ref|XP_002576452.1| heterogeneous nuclear ribonucleoprotein [Schistosoma mansoni]
gi|238661720|emb|CAZ32689.1| heterogeneous nuclear ribonucleoprotein l (hnrnp l), putative
[Schistosoma mansoni]
Length = 544
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 97/212 (45%), Gaps = 36/212 (16%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCT 72
+++VF FG + I QAL++F D +A A + C+
Sbjct: 44 LIRVFEQFGSIRDIAMIPHKG--QALIEFDDINSAERA-----------------VARCS 84
Query: 73 LRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLAS 132
+ +V F +HR + + V ++ Q S +L PES VL+ +
Sbjct: 85 ---------ENAVMFANHRLKVNYSTSKRVVHRPLENDNQHS------ELPPESRVLMLT 129
Query: 133 IENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 192
+ N QY +T+DV+H + + G V +I + K +QA++++ + + A AK L G IY
Sbjct: 130 VYNAQYPITVDVIHQITAKHGRVLRIVILRKT-RIQAMVEFKNTEEARTAKRHLNGADIY 188
Query: 193 DGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP 224
G C L + ++R T L++ N+ S D+ P
Sbjct: 189 -SGCCTLKVEFARPTRLTVTRNDQDSWDFENP 219
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 58/113 (51%), Gaps = 9/113 (7%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V I Q+ + G V +I KT QA+V+F +TE A +AK L+G I
Sbjct: 137 ITVDVIHQITAKHGRVLRIVILRKTR-IQAMVEFKNTEEARTAKRHLNGADI-------Y 188
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGK 120
G CTL++ ++ T L+V S D+ NP L ++ S ++ G+ + L G+
Sbjct: 189 SGCCTLKVEFARPTRLTVTRNDQDSWDFENPLL-LSTSLNESDGRGDISLLGR 240
>gi|119620775|gb|EAX00370.1| heterogeneous nuclear ribonucleoprotein L-like, isoform CRA_c [Homo
sapiens]
Length = 175
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 62/99 (62%), Gaps = 2/99 (2%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ + V A AK A
Sbjct: 61 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAA 119
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP 224
L G IY G C L I Y+R T L++ N++ S DYT P
Sbjct: 120 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYTKP 157
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 21 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 80
G V +I F++ G QA++ F A AK AL+G I G CTL+I Y+
Sbjct: 88 GKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAALNGADI-------YAGCCTLKIEYARP 139
Query: 81 TDLSVKFQSHRSRDYTNPYL 100
T L+V + S DYT PYL
Sbjct: 140 TRLNVIRNDNDSWDYTKPYL 159
>gi|302820932|ref|XP_002992131.1| hypothetical protein SELMODRAFT_430388 [Selaginella moellendorffii]
gi|300140057|gb|EFJ06786.1| hypothetical protein SELMODRAFT_430388 [Selaginella moellendorffii]
Length = 695
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 67/122 (54%), Gaps = 3/122 (2%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
S VL ++ N Y + + VLH VF G V+KI + + G+ IQ+ V+TA K+
Sbjct: 141 SKVLAVTVTNPIYPIDVYVLHRVFCPHGSVEKITI-SRKLGICGYIQFDSVKTAAHVKDL 199
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP-MVNSQPSILGQQPVPMV 244
L I+DG CK+ I Y++ +L + N+D +RD+ S P V S PSILG PV V
Sbjct: 200 LNDRHIFDGC-CKMEIQYAKSQELGVYFNDDNNRDFKDTSIPSRVRSDPSILGAPPVESV 258
Query: 245 GA 246
A
Sbjct: 259 PA 260
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 99/231 (42%), Gaps = 38/231 (16%)
Query: 11 IFIL-QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMG 69
+++L +VF G V KIT K G +QF +TA+ K+ L+ R I G
Sbjct: 157 VYVLHRVFCPHGSVEKITISRKL-GICGYIQFDSVKTAAHVKDLLNDRHIFD-------G 208
Query: 70 PCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVA----PSAIDASGQLSV-GLDGKK--- 121
C + I Y+ +L V F +RD+ + +P PS + A SV L +
Sbjct: 209 CCKMEIQYAKSQELGVYFNDDNNRDFKDTSIPSRVRSDPSILGAPPVESVPALTAEDAAA 268
Query: 122 ----------LEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALI 171
+ V+ S N++ V D L +FS +G ++K+ + G Q LI
Sbjct: 269 GAPAVVPTPFIGRRKRVVRVSNLNVE-KVDEDKLFNLFSPYGKIRKVQVIKVTG--QGLI 325
Query: 172 QYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 222
+ D A +A L+G +++ + + ++N ++SRDYT
Sbjct: 326 EMSDAFQAELASACLKGARVFEKELDTVVVDK--------ELNLNQSRDYT 368
>gi|355694928|gb|AER99833.1| heteroproteinous nuclear ribonucleoprotein L [Mustela putorius
furo]
Length = 249
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 66/100 (66%), Gaps = 2/100 (2%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
++VLL +I N Y++T DVL+ + + GPVQ+I +F KN G+QA++++ VQ+A AK +
Sbjct: 148 NSVLLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKAS 206
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 225
L G IY G C L I Y++ T L++ N+ + DYT P+
Sbjct: 207 LNGADIY-SGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPN 245
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 21 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 80
G V +I F K G QA+V+F ++A AK +L+G I G CTL+I Y+
Sbjct: 175 GPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIYS-------GCCTLKIEYAKP 226
Query: 81 TDLSVKFQSHRSRDYTNPYL 100
T L+V + DYTNP L
Sbjct: 227 TRLNVFKNDQDTWDYTNPNL 246
>gi|119601315|gb|EAW80909.1| hCG41678, isoform CRA_b [Homo sapiens]
Length = 446
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 62/109 (56%), Gaps = 2/109 (1%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S VL +EN+ Y TLDVLH +FS FG V+ I F K+ QAL+QY D +
Sbjct: 235 GMAMAGQSLVLRIIVENLFYPTTLDVLHQIFSKFGTVKTIT-FIKDNQFQALLQYTDPEN 293
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
A K +L+ Y+ L I +S+ L++K NND+SRDY + P
Sbjct: 294 AQHTKLSLDWQNTYNACH-TLCIDFSKLISLNVKYNNDKSRDYHARTCP 341
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 10/82 (12%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPC-TL 73
Q+FS FG V K TF K FQAL+Q++D E A K +LD ++ C TL
Sbjct: 263 QIFSKFGTV-KTITFIKDNQFQALLQYTDPENAQHTKLSLDWQNT--------YNACHTL 313
Query: 74 RITYSAHTDLSVKFQSHRSRDY 95
I +S L+VK+ + +SRDY
Sbjct: 314 CIDFSKLISLNVKYNNDKSRDY 335
>gi|386768327|ref|NP_001246433.1| smooth, isoform Z [Drosophila melanogaster]
gi|383302606|gb|AFH08186.1| smooth, isoform Z [Drosophila melanogaster]
Length = 491
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 86/165 (52%), Gaps = 19/165 (11%)
Query: 118 DGKKLEPES----NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQY 173
D ++ PE+ ++LL +I N Y +T+DVLH + G V +I +F KN G+QA++++
Sbjct: 68 DLRRKRPETTRPNHILLFTIINPFYPITVDVLHKICHPHGQVLRIVIFKKN-GVQAMVEF 126
Query: 174 PDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNN-DRSRDYTLPSTPMVNSQ 232
++ A A+E L G IY G C L I Y++ L++ N D S DYTL + + S
Sbjct: 127 DNLDAATRARENLNGADIY-AGCCTLKIDYAKPEKLNVYKNEPDTSWDYTLSTGKSLFSI 185
Query: 233 PS---ILGQQPVPMVGATANQYNGAQFAPPPPEQPMMHQPTAAGW 274
P +L QP P++G GA F PP P H T W
Sbjct: 186 PENVVMLESQP-PLLGP------GAAF--PPFGAPEYHTTTPENW 221
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 21 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 80
G V +I F+K G QA+V+F + + A+ A+ L+G I G CTL+I Y+
Sbjct: 107 GQVLRIVIFKKN-GVQAMVEFDNLDAATRARENLNGADI-------YAGCCTLKIDYAKP 158
Query: 81 TDLSV-KFQSHRSRDYT 96
L+V K + S DYT
Sbjct: 159 EKLNVYKNEPDTSWDYT 175
>gi|348530603|ref|XP_003452800.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like
[Oreochromis niloticus]
Length = 539
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 61/99 (61%), Gaps = 2/99 (2%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VLL SI+N Y +T DVL+ V + G V +I +F +N G+QA++++ V+ A AK A
Sbjct: 162 NKVLLLSIQNPLYPITTDVLYTVCNPVGNVLRIVIFKRN-GIQAMVEFESVKDAQKAKLA 220
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP 224
L G IY G C L I Y+R L++ NN+ S DYT P
Sbjct: 221 LNGADIY-AGCCTLKIEYARPNRLNVICNNNTSWDYTKP 258
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 8/80 (10%)
Query: 21 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 80
G V +I F++ G QA+V+F + A AK AL+G I G CTL+I Y+
Sbjct: 189 GNVLRIVIFKRN-GIQAMVEFESVKDAQKAKLALNGADI-------YAGCCTLKIEYARP 240
Query: 81 TDLSVKFQSHRSRDYTNPYL 100
L+V ++ S DYT P+L
Sbjct: 241 NRLNVICNNNTSWDYTKPFL 260
>gi|119601314|gb|EAW80908.1| hCG41678, isoform CRA_a [Homo sapiens]
Length = 183
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 61/104 (58%), Gaps = 4/104 (3%)
Query: 125 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 184
+S VL +EN+ Y TLDVLH +FS FG V+ I F K+ QAL+QY D + A K
Sbjct: 6 QSLVLRIIVENLFYPTTLDVLHQIFSKFGTVKTIT-FIKDNQFQALLQYTDPENAQHTKL 64
Query: 185 ALEGHCIYDGGFC-KLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
+L+ Y+ C L I +S+ L++K NND+SRDY + P
Sbjct: 65 SLDWQNTYNA--CHTLCIDFSKLISLNVKYNNDKSRDYHARTCP 106
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 10/82 (12%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPC-TL 73
Q+FS FG V K TF K FQAL+Q++D E A K +LD ++ C TL
Sbjct: 28 QIFSKFGTV-KTITFIKDNQFQALLQYTDPENAQHTKLSLDWQN--------TYNACHTL 78
Query: 74 RITYSAHTDLSVKFQSHRSRDY 95
I +S L+VK+ + +SRDY
Sbjct: 79 CIDFSKLISLNVKYNNDKSRDY 100
>gi|297713191|ref|XP_002833087.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like, partial
[Pongo abelii]
Length = 339
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 79/131 (60%), Gaps = 6/131 (4%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
++VLL +I N Y++T DVL+ + + GPVQ+I +F KN G+QA++++ VQ+A AK +
Sbjct: 202 NSVLLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKN-GVQAMVEFDSVQSAQWAKAS 260
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMV---NSQPSILGQQPVP 242
L G IY G C L + Y++ T L++ ++ + DYT P+ S P+ +QP P
Sbjct: 261 LNGADIY-SGCCALKMEYAKPTRLNVFKSDQDTWDYTNPNLSGQGDPGSNPNKRQRQP-P 318
Query: 243 MVGATANQYNG 253
++G +Y G
Sbjct: 319 LLGDHPAEYGG 329
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 21 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 80
G V +I F K G QA+V+F ++A AK +L+G I G C L++ Y+
Sbjct: 229 GPVQRIVIFRKN-GVQAMVEFDSVQSAQWAKASLNGADI-------YSGCCALKMEYAKP 280
Query: 81 TDLSVKFQSHRSRDYTNPYL 100
T L+V + DYTNP L
Sbjct: 281 TRLNVFKSDQDTWDYTNPNL 300
>gi|195487089|ref|XP_002091762.1| GE13838 [Drosophila yakuba]
gi|194177863|gb|EDW91474.1| GE13838 [Drosophila yakuba]
Length = 491
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 86/165 (52%), Gaps = 19/165 (11%)
Query: 118 DGKKLEPES----NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQY 173
D ++ PE+ ++LL +I N Y +T+DVLH + G V +I +F KN G+QA++++
Sbjct: 68 DLRRKRPETTRPNHILLFTIINPFYPITVDVLHKICHPHGQVLRIVIFKKN-GVQAMVEF 126
Query: 174 PDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNN-DRSRDYTLPSTPMVNSQ 232
++ A A+E L G IY G C L I Y++ L++ N D S DYTL + + S
Sbjct: 127 DNLDAATRARENLNGADIY-AGCCTLKIDYAKPEKLNVYKNEPDTSWDYTLSTGKSLFSI 185
Query: 233 PS---ILGQQPVPMVGATANQYNGAQFAPPPPEQPMMHQPTAAGW 274
P +L QP P++G GA F PP P H T W
Sbjct: 186 PENVVMLESQP-PLLGP------GAAF--PPFGAPEYHPTTPENW 221
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 21 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 80
G V +I F+K G QA+V+F + + A+ A+ L+G I G CTL+I Y+
Sbjct: 107 GQVLRIVIFKKN-GVQAMVEFDNLDAATRARENLNGADI-------YAGCCTLKIDYAKP 158
Query: 81 TDLSV-KFQSHRSRDYT 96
L+V K + S DYT
Sbjct: 159 EKLNVYKNEPDTSWDYT 175
>gi|386768319|ref|NP_001246429.1| smooth, isoform U [Drosophila melanogaster]
gi|383302602|gb|AFH08182.1| smooth, isoform U [Drosophila melanogaster]
Length = 515
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 89/170 (52%), Gaps = 10/170 (5%)
Query: 118 DGKKLEPES----NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQY 173
D ++ PE+ ++LL +I N Y +T+DVLH + G V +I +F KN G+QA++++
Sbjct: 63 DLRRKRPETTRPNHILLFTIINPFYPITVDVLHKICHPHGQVLRIVIFKKN-GVQAMVEF 121
Query: 174 PDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNN-DRSRDYTLPSTPMVNSQ 232
++ A A+E L G IY G C L I Y++ L++ N D S DYTL + ++ +
Sbjct: 122 DNLDAATRARENLNGADIY-AGCCTLKIDYAKPEKLNVYKNEPDTSWDYTLSTGEILPIK 180
Query: 233 PSILGQQPV---PMVGATANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPP 279
G+ P+ P+ G Y+ + F+ P + QP G GA P
Sbjct: 181 EIGNGRSPLLQEPLYGTRPQPYSKSLFSIPENVVMLESQPPLLGPGAAFP 230
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 57/120 (47%), Gaps = 12/120 (10%)
Query: 21 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 80
G V +I F+K G QA+V+F + + A+ A+ L+G I G CTL+I Y+
Sbjct: 102 GQVLRIVIFKKN-GVQAMVEFDNLDAATRARENLNGADI-------YAGCCTLKIDYAKP 153
Query: 81 TDLSV-KFQSHRSRDY---TNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENM 136
L+V K + S DY T LP+ S L L G + +P S L + EN+
Sbjct: 154 EKLNVYKNEPDTSWDYTLSTGEILPIKEIGNGRSPLLQEPLYGTRPQPYSKSLFSIPENV 213
>gi|432843758|ref|XP_004065651.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Oryzias
latipes]
Length = 582
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 91/175 (52%), Gaps = 12/175 (6%)
Query: 125 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 184
++ VLL SI+N Y +T DVL+ V + G V +I +F +N G+QA++++ V+ A AK
Sbjct: 202 KNKVLLLSIQNPLYPITTDVLYTVCNPVGNVLRIVIFKRN-GIQAMVEFESVEDAQKAKL 260
Query: 185 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMV 244
AL G IY G C L I Y+R L++ N++ S DYT P + G+Q ++
Sbjct: 261 ALNGADIYSGC-CTLKIEYARPNRLNVVRNDNTSWDYTKPFLLHRDVVKRGKGRQRQAIL 319
Query: 245 GATANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMPMMGNHPYMPPGSMP 299
G + G P P++ PT + + +S+ + M ++P + P + P
Sbjct: 320 GEHPSNGYG-------PHCPLLTLPTNSRYRR---SSEQVQDMISYPPLLPKTFP 364
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 16 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 75
V + G V +I F++ G QA+V+F E A AK AL+G I G CTL+I
Sbjct: 225 VCNPVGNVLRIVIFKRN-GIQAMVEFESVEDAQKAKLALNGADI-------YSGCCTLKI 276
Query: 76 TYSAHTDLSVKFQSHRSRDYTNPYL 100
Y+ L+V + S DYT P+L
Sbjct: 277 EYARPNRLNVVRNDNTSWDYTKPFL 301
>gi|226481403|emb|CAX73599.1| Heterogeneous nuclear ribonucleoprotein L [Schistosoma japonicum]
Length = 535
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 94/219 (42%), Gaps = 50/219 (22%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCT 72
+++VF FG + I QAL++F D +A A + C+
Sbjct: 35 LIRVFEQFGSIRDIAMIPHKG--QALIEFDDINSAERA-----------------VARCS 75
Query: 73 LRITYSAHTDLSVKFQS-----HR--SRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPE 125
A+ L V + + HR D +P LP PE
Sbjct: 76 ENAVMFANHRLKVNYSTSKRVIHRPLENDNQHPELP----------------------PE 113
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
S VL+ ++ N QY +T+DV+H + + G V +I + K +QA++++ + + A AK
Sbjct: 114 SRVLILTVYNAQYPITVDVIHQITAKHGRVLRIVILRKT-RIQAMVEFKNTEEARTAKRH 172
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP 224
L G IY G C L + ++R T L++ N+ S D+ P
Sbjct: 173 LNGADIY-SGCCTLKVEFARPTRLTVTRNDQDSWDFENP 210
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 55/109 (50%), Gaps = 9/109 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V I Q+ + G V +I KT QA+V+F +TE A +AK L+G I
Sbjct: 128 ITVDVIHQITAKHGRVLRIVILRKTR-IQAMVEFKNTEEARTAKRHLNGADI-------Y 179
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAP-SAIDASGQLSV 115
G CTL++ ++ T L+V S D+ NP L +P + D G +S+
Sbjct: 180 SGCCTLKVEFARPTRLTVTRNDQDSWDFENPLLLSSPLNEADGRGDISL 228
>gi|326430347|gb|EGD75917.1| polypyrimidine tract-binding protein 1 isoform d [Salpingoeca sp.
ATCC 50818]
Length = 496
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 69/125 (55%), Gaps = 13/125 (10%)
Query: 120 KKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTA 179
+ P S L+A + N+ Y+++L LH +FS G V K+ F K LQAL+Q +A
Sbjct: 113 RDTNPPSKCLIAKVTNLSYSISLQTLHSLFSRAGRVDKMVCFMKQSFLQALVQMDSEASA 172
Query: 180 VVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND--RSRDY---------TLPSTPM 228
+A+ L IY G C L + +S+ +++++ ++D R+RD+ TLP+TP
Sbjct: 173 ALARRMLNNQDIY-SGCCHLAVEFSKLNEVTVRQDSDPARARDFIRSPLMDGETLPNTP- 230
Query: 229 VNSQP 233
+N QP
Sbjct: 231 INLQP 235
>gi|389584747|dbj|GAB67479.1| polypyrimidine tract binding protein [Plasmodium cynomolgi strain
B]
Length = 746
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 62/99 (62%), Gaps = 4/99 (4%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGL-QALIQYPDVQTAVVAKE 184
S V+L S+ N+ Y V +++++ +FS G V+KI F +N + QAL+Q+P+++TA A +
Sbjct: 399 SRVILVSVLNLHYPVDIELIYYLFSKCGTVEKIITFSRNPLIYQALVQFPNIETAQEAIK 458
Query: 185 ALEGHCIYDGGFCK-LHISYSRHTDLSIKVNNDRSRDYT 222
L IYDG C + I YS +L +K NN SRDYT
Sbjct: 459 TLHNRNIYDG--CNTIQIQYSFLKELVVKANNSSSRDYT 495
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 98/227 (43%), Gaps = 34/227 (14%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKT-AGFQALVQFSDTETASSAKNALDGRSIPRYLLPE 66
+ + I +FS G V KI TF + +QALVQF + ETA A L R+I
Sbjct: 413 VDIELIYYLFSKCGTVEKIITFSRNPLIYQALVQFPNIETAQEAIKTLHNRNIYD----- 467
Query: 67 NMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSV-------GLDG 119
G T++I YS +L VK + SRDYT + + ++ V G D
Sbjct: 468 --GCNTIQIQYSFLKELVVKANNSSSRDYTAANMTKNKNLLNFQTSHGVLPTPTRKGNDS 525
Query: 120 K---KLEPESNVLLASIEN-------MQYAVTLDV-----LHMVFSAFGPVQKIAMFDKN 164
+ LE + ++ +N + Y + D L +FS +G V +I + +
Sbjct: 526 ELYLMLERKFKLVDFDAKNTSKTPVLICYNIPKDYTDVHKLFNLFSVYGFVSRIKILREK 585
Query: 165 GGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 211
ALIQY A VA+E L+ + D L + +S+ D+ I
Sbjct: 586 PD-SALIQYAGYLFASVAQECLQHAKVGDQV---LELHFSKILDIRI 628
>gi|156100793|ref|XP_001616090.1| polypyrimidine tract binding protein [Plasmodium vivax Sal-1]
gi|148804964|gb|EDL46363.1| polypyrimidine tract binding protein, putative [Plasmodium vivax]
Length = 747
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 76/126 (60%), Gaps = 9/126 (7%)
Query: 100 LPVAPSAIDASGQLSVGLDGKKLEPESN-VLLASIENMQYAVTLDVLHMVFSAFGPVQKI 158
+P A A++ + + + GK+ + ES+ V+L S+ N+ Y V +++++ +FS G V+KI
Sbjct: 377 VPSAKDALEGANKKT----GKQNKNESSRVILVSVLNLHYPVDIELIYYLFSKCGTVEKI 432
Query: 159 AMFDKNGGL-QALIQYPDVQTAVVAKEALEGHCIYDGGFCK-LHISYSRHTDLSIKVNND 216
F +N + QAL+Q+ +++TA A + L IYDG C + I YS +L +K NN
Sbjct: 433 ITFSRNPLIYQALVQFQNIETAQEAIKTLHNRNIYDG--CNTIQIQYSFLKELVVKANNS 490
Query: 217 RSRDYT 222
SRDYT
Sbjct: 491 SSRDYT 496
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 97/227 (42%), Gaps = 34/227 (14%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKT-AGFQALVQFSDTETASSAKNALDGRSIPRYLLPE 66
+ + I +FS G V KI TF + +QALVQF + ETA A L R+I
Sbjct: 414 VDIELIYYLFSKCGTVEKIITFSRNPLIYQALVQFQNIETAQEAIKTLHNRNIYD----- 468
Query: 67 NMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSV-------GLDG 119
G T++I YS +L VK + SRDYT L + ++ V G D
Sbjct: 469 --GCNTIQIQYSFLKELVVKANNSSSRDYTATNLGKNKNLLNFQTSHGVLPTPTRKGNDS 526
Query: 120 K---KLEPESNVLLASIENMQYAVTL----------DV--LHMVFSAFGPVQKIAMFDKN 164
+ LE + ++ +N L DV L +FS +G V +I + +
Sbjct: 527 ELYLMLERKFKLVDFDAKNTSKTPVLICYNIPKDYTDVHKLFNLFSVYGFVSRIKILREK 586
Query: 165 GGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 211
ALIQY A VA+E L+ + D L + +S+ D+ I
Sbjct: 587 PD-SALIQYAGYLFASVAQECLQHAKVGDQ---VLELHFSKILDIRI 629
>gi|386768317|ref|NP_001246428.1| smooth, isoform T [Drosophila melanogaster]
gi|383302601|gb|AFH08181.1| smooth, isoform T [Drosophila melanogaster]
Length = 552
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 74/129 (57%), Gaps = 7/129 (5%)
Query: 118 DGKKLEPES----NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQY 173
D ++ PE+ ++LL +I N Y +T+DVLH + G V +I +F KN G+QA++++
Sbjct: 68 DLRRKRPETTRPNHILLFTIINPFYPITVDVLHKICHPHGQVLRIVIFKKN-GVQAMVEF 126
Query: 174 PDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNN-DRSRDYTLPSTPMVNSQ 232
++ A A+E L G IY G C L I Y++ L++ N D S DYTL + + +
Sbjct: 127 DNLDAATRARENLNGADIY-AGCCTLKIDYAKPEKLNVYKNEPDTSWDYTLSTVKEIGNG 185
Query: 233 PSILGQQPV 241
S L Q+P+
Sbjct: 186 RSPLLQEPL 194
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 21 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 80
G V +I F+K G QA+V+F + + A+ A+ L+G I G CTL+I Y+
Sbjct: 107 GQVLRIVIFKKN-GVQAMVEFDNLDAATRARENLNGADI-------YAGCCTLKIDYAKP 158
Query: 81 TDLSV-KFQSHRSRDYT 96
L+V K + S DYT
Sbjct: 159 EKLNVYKNEPDTSWDYT 175
>gi|281363805|ref|NP_001027439.2| smooth, isoform H [Drosophila melanogaster]
gi|40882465|gb|AAR96144.1| RE74969p [Drosophila melanogaster]
gi|272432576|gb|AAZ52803.2| smooth, isoform H [Drosophila melanogaster]
Length = 480
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 82/162 (50%), Gaps = 24/162 (14%)
Query: 118 DGKKLEPES----NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQY 173
D ++ PE+ ++LL +I N Y +T+DVLH + G V +I +F KN G+QA++++
Sbjct: 68 DLRRKRPETTRPNHILLFTIINPFYPITVDVLHKICHPHGQVLRIVIFKKN-GVQAMVEF 126
Query: 174 PDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNN-DRSRDYTLPSTPMVNSQ 232
++ A A+E L G IY G C L I Y++ L++ N D S DYTL ST + +
Sbjct: 127 DNLDAATRARENLNGADIY-AGCCTLKIDYAKPEKLNVYKNEPDTSWDYTL-STGEILPK 184
Query: 233 PSILGQQPVPMVGATANQYNGAQFAPPPPEQPMMHQPTAAGW 274
P +LG GA F PP P H T W
Sbjct: 185 PPLLGP--------------GAAF--PPFGAPEYHTTTPENW 210
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 21 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 80
G V +I F+K G QA+V+F + + A+ A+ L+G I G CTL+I Y+
Sbjct: 107 GQVLRIVIFKKN-GVQAMVEFDNLDAATRARENLNGADI-------YAGCCTLKIDYAKP 158
Query: 81 TDLSV-KFQSHRSRDYT 96
L+V K + S DYT
Sbjct: 159 EKLNVYKNEPDTSWDYT 175
>gi|386768311|ref|NP_001246426.1| smooth, isoform M [Drosophila melanogaster]
gi|383302598|gb|AFH08179.1| smooth, isoform M [Drosophila melanogaster]
Length = 497
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 88/170 (51%), Gaps = 23/170 (13%)
Query: 118 DGKKLEPES----NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQY 173
D ++ PE+ ++LL +I N Y +T+DVLH + G V +I +F KN G+QA++++
Sbjct: 68 DLRRKRPETTRPNHILLFTIINPFYPITVDVLHKICHPHGQVLRIVIFKKN-GVQAMVEF 126
Query: 174 PDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNN-DRSRDYTLPSTPM---- 228
++ A A+E L G IY G C L I Y++ L++ N D S DYTL + +
Sbjct: 127 DNLDAATRARENLNGADIY-AGCCTLKIDYAKPEKLNVYKNEPDTSWDYTLSTGEILPIK 185
Query: 229 -VNSQPSILGQQPV---PMVGATANQYNGAQFAPPPPEQPMMHQPTAAGW 274
+ + S L Q+P+ P++G GA F PP P H T W
Sbjct: 186 EIGNGRSPLLQEPLYEPPLLGP------GAAF--PPFGAPEYHTTTPENW 227
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 21 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 80
G V +I F+K G QA+V+F + + A+ A+ L+G I G CTL+I Y+
Sbjct: 107 GQVLRIVIFKKN-GVQAMVEFDNLDAATRARENLNGADI-------YAGCCTLKIDYAKP 158
Query: 81 TDLSV-KFQSHRSRDYT 96
L+V K + S DYT
Sbjct: 159 EKLNVYKNEPDTSWDYT 175
>gi|291224827|ref|XP_002732404.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like
[Saccoglossus kowalevskii]
Length = 423
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 55/83 (66%), Gaps = 2/83 (2%)
Query: 143 DVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 202
DV+H + + FGPVQ+I +F KN G+Q +I+YP + +A AK +L G IY G C L I
Sbjct: 104 DVMHTICNPFGPVQRIVIFKKN-GVQTMIEYPLIYSASRAKASLNGADIY-SGCCTLKIE 161
Query: 203 YSRHTDLSIKVNNDRSRDYTLPS 225
Y+R T L++ N++ + DYT P+
Sbjct: 162 YARPTRLNVYKNDNETYDYTNPT 184
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 8/81 (9%)
Query: 20 FGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSA 79
FG V +I F+K G Q ++++ +AS AK +L+G I G CTL+I Y+
Sbjct: 113 FGPVQRIVIFKKN-GVQTMIEYPLIYSASRAKASLNGADIYS-------GCCTLKIEYAR 164
Query: 80 HTDLSVKFQSHRSRDYTNPYL 100
T L+V + + DYTNP L
Sbjct: 165 PTRLNVYKNDNETYDYTNPTL 185
>gi|399216457|emb|CCF73145.1| unnamed protein product [Babesia microti strain RI]
Length = 526
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 62/113 (54%), Gaps = 6/113 (5%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKN-GGLQALIQYPDVQTAVVAKE 184
+ +LL SI N+ Y V ++++H +FS FG V KI F KN QA +Q+ + A
Sbjct: 154 TKILLVSITNLVYPVDIELIHFLFSKFGTVNKIVCFSKNPATFQAFVQFEHHSQSKEALA 213
Query: 185 ALEGHCIYDGGFCK-LHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSIL 236
AL IY C +H+SYS DL +K N+ RS DYT S P+++ P L
Sbjct: 214 ALNNRNIYSD--CNTIHVSYSNMEDLIVKSNSARSWDYT--SAPLLDRPPDYL 262
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 50/100 (50%), Gaps = 11/100 (11%)
Query: 16 VFSAFGFVHKITTFEKT-AGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPC-TL 73
+FS FG V+KI F K A FQA VQF + A AL+ R+I C T+
Sbjct: 176 LFSKFGTVNKIVCFSKNPATFQAFVQFEHHSQSKEALAALNNRNI--------YSDCNTI 227
Query: 74 RITYSAHTDLSVKFQSHRSRDYTN-PYLPVAPSAIDASGQ 112
++YS DL VK S RS DYT+ P L P + GQ
Sbjct: 228 HVSYSNMEDLIVKSNSARSWDYTSAPLLDRPPDYLRGRGQ 267
>gi|432114048|gb|ELK36095.1| Heterogeneous nuclear ribonucleoprotein L-like protein [Myotis
davidii]
Length = 628
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 96/199 (48%), Gaps = 27/199 (13%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQ-----YPDVQTAV 180
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA+I + V A
Sbjct: 263 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMISLIELMFESVLCAQ 321
Query: 181 VAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQP 240
AK AL G IY G C L I Y+R T L++ N++ S DYT P + + G+Q
Sbjct: 322 KAKAALNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQR 377
Query: 241 VPMVGATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNH 290
++G + + + P P+ P+ G+ +P AS S GN
Sbjct: 378 QAILGEHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN- 433
Query: 291 PYMPPGSMPMGPGMMQMHM 309
P GS+ M G+ + M
Sbjct: 434 ---PSGSVVMVSGLHPLKM 449
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 46/98 (46%), Gaps = 13/98 (13%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQ-----FSDTETASSAKNALDGRSIPRY 62
+ V + V + G V +I F++ G QA++ F A AK AL+G I
Sbjct: 277 ITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMISLIELMFESVLCAQKAKAALNGADI--- 332
Query: 63 LLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
G CTL+I Y+ T L+V + S DYT PYL
Sbjct: 333 ----YAGCCTLKIEYARPTRLNVIRNDNDSWDYTKPYL 366
>gi|386768313|ref|NP_001246427.1| smooth, isoform O [Drosophila melanogaster]
gi|383302599|gb|AFH08180.1| smooth, isoform O [Drosophila melanogaster]
Length = 494
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 87/170 (51%), Gaps = 24/170 (14%)
Query: 118 DGKKLEPES----NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQY 173
D ++ PE+ ++LL +I N Y +T+DVLH + G V +I +F KN G+QA++++
Sbjct: 68 DLRRKRPETTRPNHILLFTIINPFYPITVDVLHKICHPHGQVLRIVIFKKN-GVQAMVEF 126
Query: 174 PDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNN-DRSRDYTLPSTPMVNSQ 232
++ A A+E L G IY G C L I Y++ L++ N D S DYTL + ++ S+
Sbjct: 127 DNLDAATRARENLNGADIY-AGCCTLKIDYAKPEKLNVYKNEPDTSWDYTLSTGEILPSK 185
Query: 233 P--------SILGQQPVPMVGATANQYNGAQFAPPPPEQPMMHQPTAAGW 274
+L QP P++G GA F PP P H T W
Sbjct: 186 SLFSIPENVVMLESQP-PLLGP------GAAF--PPFGAPEYHTTTPENW 226
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 21 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 80
G V +I F+K G QA+V+F + + A+ A+ L+G I G CTL+I Y+
Sbjct: 107 GQVLRIVIFKKN-GVQAMVEFDNLDAATRARENLNGADI-------YAGCCTLKIDYAKP 158
Query: 81 TDLSV-KFQSHRSRDYT 96
L+V K + S DYT
Sbjct: 159 EKLNVYKNEPDTSWDYT 175
>gi|405962643|gb|EKC28300.1| Heterogeneous nuclear ribonucleoprotein L [Crassostrea gigas]
Length = 551
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 66/101 (65%), Gaps = 4/101 (3%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+++LL +I N QY VT+D++H + S +G V +I +F K+ G+Q+++++ DV++A AK+A
Sbjct: 119 NHILLFTILNPQYPVTVDIMHTICSPYGQVVRIVIFRKS-GMQSMVEFDDVESAKRAKQA 177
Query: 186 LEGHCIYDGGFCK-LHISYSRHTDLSIKVNNDRSRDYTLPS 225
L G IY C L I Y++ L++ N+ S DYT P+
Sbjct: 178 LNGADIYSD--CNTLKIEYAKTDKLNVFKNDQSSWDYTNPN 216
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 16 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPC-TLR 74
+ S +G V +I F K+ G Q++V+F D E+A AK AL+G I C TL+
Sbjct: 141 ICSPYGQVVRIVIFRKS-GMQSMVEFDDVESAKRAKQALNGADI--------YSDCNTLK 191
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYL 100
I Y+ L+V S DYTNP L
Sbjct: 192 IEYAKTDKLNVFKNDQSSWDYTNPNL 217
>gi|328724092|ref|XP_001949062.2| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like
[Acyrthosiphon pisum]
Length = 428
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 76/138 (55%), Gaps = 8/138 (5%)
Query: 94 DYTNPYLPVAP---SAIDASGQLSVGLDGKKLEPES---NVLLASIENMQYAVTLDVLHM 147
D TN L A + + +S DG++ E+ ++LL +I + Y + DV+H
Sbjct: 15 DQTNKRLRTADYDRESRTTNSSVSSYEDGRRKNAETQPNHILLLTITKVTYPINTDVIHT 74
Query: 148 VFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHT 207
+ G V +I +F K G +QA+++Y +V+ A+ AK+ ++G IY G C L + Y++ +
Sbjct: 75 ISKDHGNVMRIVIFRKRG-VQAMVEYEEVEQAIRAKQLMDGADIYQGC-CTLRVEYAKPS 132
Query: 208 DLSIKVNNDRSRDYTLPS 225
L++ N+ + DYT P+
Sbjct: 133 KLNVYKNDSETWDYTTPN 150
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 14/102 (13%)
Query: 3 LTLSLLKVIF------ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDG 56
L L++ KV + I + G V +I F K G QA+V++ + E A AK +DG
Sbjct: 56 LLLTITKVTYPINTDVIHTISKDHGNVMRIVIFRK-RGVQAMVEYEEVEQAIRAKQLMDG 114
Query: 57 RSIPRYLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNP 98
I + G CTLR+ Y+ + L+V + DYT P
Sbjct: 115 ADIYQ-------GCCTLRVEYAKPSKLNVYKNDSETWDYTTP 149
>gi|17136488|ref|NP_476731.1| smooth, isoform A [Drosophila melanogaster]
gi|78707266|ref|NP_001027440.1| smooth, isoform E [Drosophila melanogaster]
gi|1321808|emb|CAA66282.1| smooth [Drosophila melanogaster]
gi|7302450|gb|AAF57535.1| smooth, isoform A [Drosophila melanogaster]
gi|71911687|gb|AAZ52802.1| smooth, isoform E [Drosophila melanogaster]
Length = 475
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 80/162 (49%), Gaps = 29/162 (17%)
Query: 118 DGKKLEPES----NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQY 173
D ++ PE+ ++LL +I N Y +T+DVLH + G V +I +F KN G+QA++++
Sbjct: 68 DLRRKRPETTRPNHILLFTIINPFYPITVDVLHKICHPHGQVLRIVIFKKN-GVQAMVEF 126
Query: 174 PDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNN-DRSRDYTLPSTPMVNSQ 232
++ A A+E L G IY G C L I Y++ L++ N D S DYTL + P
Sbjct: 127 DNLDAATRARENLNGADIY-AGCCTLKIDYAKPEKLNVYKNEPDTSWDYTLSTEP----- 180
Query: 233 PSILGQQPVPMVGATANQYNGAQFAPPPPEQPMMHQPTAAGW 274
P++G GA F PP P H T W
Sbjct: 181 ---------PLLGP------GAAF--PPFGAPEYHTTTPENW 205
Score = 41.6 bits (96), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 21 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 80
G V +I F+K G QA+V+F + + A+ A+ L+G I G CTL+I Y+
Sbjct: 107 GQVLRIVIFKKN-GVQAMVEFDNLDAATRARENLNGADI-------YAGCCTLKIDYAKP 158
Query: 81 TDLSV-KFQSHRSRDYT 96
L+V K + S DYT
Sbjct: 159 EKLNVYKNEPDTSWDYT 175
>gi|195335919|ref|XP_002034610.1| GM19821 [Drosophila sechellia]
gi|194126580|gb|EDW48623.1| GM19821 [Drosophila sechellia]
Length = 237
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 67/113 (59%), Gaps = 7/113 (6%)
Query: 118 DGKKLEPES----NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQY 173
D ++ PE+ ++LL +I N Y +T+DVLH + GPV +I +F KN G+QA++++
Sbjct: 68 DLRRKRPETTRPNHILLFTIINPFYPITVDVLHKICHPHGPVLRIVIFKKN-GVQAMVEF 126
Query: 174 PDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNN-DRSRDYTLPS 225
++ A A+E L G IY G C L I Y++ L++ N D S DYTL +
Sbjct: 127 DNLDAATRARENLNGADIY-AGCCTLKIDYAKPEKLNVYKNEPDTSWDYTLST 178
Score = 40.8 bits (94), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 9/101 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + ++ G V +I F+K G QA+V+F + + A+ A+ L+G I
Sbjct: 94 ITVDVLHKICHPHGPVLRIVIFKKN-GVQAMVEFDNLDAATRARENLNGADI-------Y 145
Query: 68 MGPCTLRITYSAHTDLSV-KFQSHRSRDYTNPYLPVAPSAI 107
G CTL+I Y+ L+V K + S DYT + PSA
Sbjct: 146 AGCCTLKIDYAKPEKLNVYKNEPDTSWDYTLSTGEILPSAF 186
>gi|351695246|gb|EHA98164.1| Heterogeneous nuclear ribonucleoprotein L [Heterocephalus glaber]
Length = 539
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 77/130 (59%), Gaps = 5/130 (3%)
Query: 99 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 156
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 101 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 160
Query: 157 KIAMFDKNGGLQALIQYPDVQ-TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNN 215
+I +F KN G+QA+++YP ++ +A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 161 RIVIFRKN-GVQAMVEYPLLRNSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKND 218
Query: 216 DRSRDYTLPS 225
+ DYT P+
Sbjct: 219 QDTWDYTNPN 228
Score = 41.2 bits (95), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 41/81 (50%), Gaps = 9/81 (11%)
Query: 21 GFVHKITTFEKTAGFQALVQF-SDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSA 79
G V +I F K G QA+V++ +A AK +L+G I G CTL+I Y+
Sbjct: 157 GPVQRIVIFRKN-GVQAMVEYPLLRNSAQRAKASLNGADIYS-------GCCTLKIEYAK 208
Query: 80 HTDLSVKFQSHRSRDYTNPYL 100
T L+V + DYTNP L
Sbjct: 209 PTRLNVFKNDQDTWDYTNPNL 229
>gi|195056920|ref|XP_001995181.1| GH22768 [Drosophila grimshawi]
gi|193899387|gb|EDV98253.1| GH22768 [Drosophila grimshawi]
Length = 482
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 70/115 (60%), Gaps = 7/115 (6%)
Query: 118 DGKKLEPES----NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQY 173
D ++ PE+ ++LL +I N Y +T+DVLH + + G V +I +F KN G+QA++++
Sbjct: 75 DLRRKRPETTRPNHILLFTIINPFYPITVDVLHKICNPHGQVLRIVIFKKN-GVQAMVEF 133
Query: 174 PDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI-KVNNDRSRDYTLPSTP 227
++ +A A+E L G IY G C L I +++ L++ K +D S DYTL + P
Sbjct: 134 DNLDSATRARENLNGADIY-AGCCTLKIDFAKPEKLNVYKNESDTSWDYTLSTEP 187
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + ++ + G V +I F+K G QA+V+F + ++A+ A+ L+G I
Sbjct: 101 ITVDVLHKICNPHGQVLRIVIFKKN-GVQAMVEFDNLDSATRARENLNGADI-------Y 152
Query: 68 MGPCTLRITYSAHTDLSV-KFQSHRSRDYT 96
G CTL+I ++ L+V K +S S DYT
Sbjct: 153 AGCCTLKIDFAKPEKLNVYKNESDTSWDYT 182
>gi|326428995|gb|EGD74565.1| hypothetical protein PTSG_05929 [Salpingoeca sp. ATCC 50818]
Length = 554
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 59/103 (57%), Gaps = 7/103 (6%)
Query: 127 NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNG------GLQALIQYPDVQTAV 180
VL+ ++ N Y + +DV++ V S G V +I M KNG +AL+++PD TA
Sbjct: 112 KVLMMTVMNASYPINVDVIYAVCSPLGRVLRIVMIRKNGVQSAPPTARALVEFPDANTAA 171
Query: 181 VAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTL 223
+L+G IY G C L I YS+ ++++ N++ +RD+T+
Sbjct: 172 AVMSSLQGANIYQ-GCCTLRIEYSKADRVNVRYNSEETRDFTV 213
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 47/96 (48%), Gaps = 15/96 (15%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQ-------ALVQFSDTETASSAKNALDGRSIP 60
+ V I V S G V +I K G Q ALV+F D TA++ ++L G +I
Sbjct: 125 INVDVIYAVCSPLGRVLRIVMIRKN-GVQSAPPTARALVEFPDANTAAAVMSSLQGANI- 182
Query: 61 RYLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYT 96
G CTLRI YS ++V++ S +RD+T
Sbjct: 183 ------YQGCCTLRIEYSKADRVNVRYNSEETRDFT 212
>gi|195431604|ref|XP_002063826.1| GK15699 [Drosophila willistoni]
gi|194159911|gb|EDW74812.1| GK15699 [Drosophila willistoni]
Length = 478
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 67/115 (58%), Gaps = 7/115 (6%)
Query: 118 DGKKLEPES----NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQY 173
D ++ PE+ ++LL +I N Y +T+DVLH + + G V +I +F KN G+QA++++
Sbjct: 71 DLRRKRPETTRPNHILLFTIINPFYPITVDVLHKICNPHGQVLRIVIFKKN-GVQAMVEF 129
Query: 174 PDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNN-DRSRDYTLPSTP 227
+ A A+E L G IY G C L I Y++ L++ N D S DYTL + P
Sbjct: 130 DSLDAATRARENLNGADIY-AGCCTLKIDYAKPEKLNVYKNEPDTSWDYTLSTEP 183
Score = 41.2 bits (95), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 9/90 (10%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + ++ + G V +I F+K G QA+V+F + A+ A+ L+G I
Sbjct: 97 ITVDVLHKICNPHGQVLRIVIFKKN-GVQAMVEFDSLDAATRARENLNGADI-------Y 148
Query: 68 MGPCTLRITYSAHTDLSV-KFQSHRSRDYT 96
G CTL+I Y+ L+V K + S DYT
Sbjct: 149 AGCCTLKIDYAKPEKLNVYKNEPDTSWDYT 178
>gi|327287724|ref|XP_003228578.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Anolis
carolinensis]
Length = 553
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 97/210 (46%), Gaps = 42/210 (20%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+NVLL +I N Y++T DVL+ + + GPVQ+I +F KNG +QA++++ VQ+A AK +
Sbjct: 156 NNVLLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKNG-VQAMVEFDSVQSAQRAKAS 214
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 245
L G IY G C L I Y++ T L++ N+ + DYT P++ GQ G
Sbjct: 215 LNGADIY-SGCCTLKIEYAKPTRLNVFKNDQDTWDYT---------NPNLSGQ------G 258
Query: 246 ATANQYNGAQFAPP-----PPEQPMMHQPTA-----AGWGAVPPASQSMPMMGNHPYMPP 295
N Q PP P E H G+G PP + M
Sbjct: 259 EPGGNPNKRQRQPPLLGDHPAEYGGPHGGYHGHYHDEGYGPPPPHYEGRRM--------- 309
Query: 296 GSMPMGPGMMQMHM-PGQSGMQHHHGAMPP 324
GP + H PG+ G Q+ H PP
Sbjct: 310 -----GPPVGGRHRGPGRYGPQYGHPPPPP 334
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 21 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 80
G V +I F K G QA+V+F ++A AK +L+G I G CTL+I Y+
Sbjct: 183 GPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADI-------YSGCCTLKIEYAKP 234
Query: 81 TDLSVKFQSHRSRDYTNPYL 100
T L+V + DYTNP L
Sbjct: 235 TRLNVFKNDQDTWDYTNPNL 254
>gi|358254215|dbj|GAA54232.1| heterogeneous nuclear ribonucleoprotein L, partial [Clonorchis
sinensis]
Length = 561
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 60/96 (62%), Gaps = 2/96 (2%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
++VLL ++ N+Q+ VTL V+H + S F V +I MF K +QA++++ V+ A K+
Sbjct: 181 NHVLLYTVFNVQHPVTLKVIHQITSMFAEVVRIVMFRK-SNIQAMVEFKSVEDARRVKQN 239
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDY 221
L G IY G C L + Y+R T L++K N++ + D+
Sbjct: 240 LNGADIY-SGCCTLKVDYARPTRLTVKRNDEDTWDF 274
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 51/109 (46%), Gaps = 16/109 (14%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
LKVI Q+ S F V +I F K + QA+V+F E A K L+G I
Sbjct: 197 LKVIH--QITSMFAEVVRIVMFRK-SNIQAMVEFKSVEDARRVKQNLNGADI-------Y 246
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVG 116
G CTL++ Y+ T L+VK + D+ N +A DA SVG
Sbjct: 247 SGCCTLKVDYARPTRLTVKRNDEDTWDFEN------NNAADAEPDDSVG 289
>gi|86170640|ref|XP_966055.1| polypyrimidine tract binding protein, putative [Plasmodium
falciparum 3D7]
gi|46362297|emb|CAG25235.1| polypyrimidine tract binding protein, putative [Plasmodium
falciparum 3D7]
Length = 663
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 65/110 (59%), Gaps = 4/110 (3%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGL-QALIQYPDVQTAVVAKE 184
S V+L S+ N+ Y V +++++ +FS G V+KI F +N L QAL+Q+ +V+TA A +
Sbjct: 315 SKVILVSVINLHYPVDIELIYYLFSKCGTVEKIITFSRNPVLYQALVQFDNVETAKEAIK 374
Query: 185 ALEGHCIYDGGFCK-LHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQP 233
L IYDG C ++I YS +L IK NN S DYT+ + + P
Sbjct: 375 TLHNRNIYDG--CNTINIQYSFLKELVIKGNNSSSWDYTISNEKKTKNFP 422
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 89/216 (41%), Gaps = 35/216 (16%)
Query: 12 FILQVFSAFGFVHKITTFEKT-AGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGP 70
I +FS G V KI TF + +QALVQF + ETA A L R+I G
Sbjct: 333 LIYYLFSKCGTVEKIITFSRNPVLYQALVQFDNVETAKEAIKTLHNRNIYD-------GC 385
Query: 71 CTLRITYSAHTDLSVKFQSHRSRDYT------NPYLPV---------APSAIDASGQLSV 115
T+ I YS +L +K + S DYT PV PS +L
Sbjct: 386 NTINIQYSFLKELVIKGNNSSSWDYTISNEKKTKNFPVLQNSHGVLPTPSRKSVDSELYQ 445
Query: 116 GLDGK-------KLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQ 168
++ K K+ P +L + ++ L +FS +G V +I + +
Sbjct: 446 LMEKKFKLVDFEKMNPSKTPVLICYNIPKEYTDVNKLFNLFSIYGFVTRIKILREKPD-A 504
Query: 169 ALIQYPDVQTAVVAKEALEGHCI----YDGGFCKLH 200
ALIQY + + +A+E L+ I + F K+H
Sbjct: 505 ALIQYSNYIFSSLAQEYLQRARISNQSIEVNFSKIH 540
>gi|291490719|gb|ADE06675.1| MIP19475p [Drosophila melanogaster]
Length = 206
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 7/116 (6%)
Query: 118 DGKKLEPES----NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQY 173
D ++ PE+ ++LL +I N Y +T+DVLH + G V +I +F KN G+QA++++
Sbjct: 77 DLRRKRPETTRPNHILLFTIINPFYPITVDVLHKICHPHGQVLRIVIFKKN-GVQAMVEF 135
Query: 174 PDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNN-DRSRDYTLPSTPM 228
++ A A+E L G IY G C L I Y++ L++ N D S DYTL + M
Sbjct: 136 DNLDAATRARENLNGADIY-AGCCTLKIDYAKPEKLNVYKNEPDTSWDYTLSTREM 190
Score = 40.8 bits (94), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 21 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 80
G V +I F+K G QA+V+F + + A+ A+ L+G I G CTL+I Y+
Sbjct: 116 GQVLRIVIFKKN-GVQAMVEFDNLDAATRARENLNGADI-------YAGCCTLKIDYAKP 167
Query: 81 TDLSV-KFQSHRSRDYT 96
L+V K + S DYT
Sbjct: 168 EKLNVYKNEPDTSWDYT 184
>gi|442624264|ref|NP_001261093.1| smooth, isoform AB [Drosophila melanogaster]
gi|440214533|gb|AGB93625.1| smooth, isoform AB [Drosophila melanogaster]
Length = 509
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 7/116 (6%)
Query: 118 DGKKLEPES----NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQY 173
D ++ PE+ ++LL +I N Y +T+DVLH + G V +I +F KN G+QA++++
Sbjct: 68 DLRRKRPETTRPNHILLFTIINPFYPITVDVLHKICHPHGQVLRIVIFKKN-GVQAMVEF 126
Query: 174 PDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNN-DRSRDYTLPSTPM 228
++ A A+E L G IY G C L I Y++ L++ N D S DYTL + M
Sbjct: 127 DNLDAATRARENLNGADIY-AGCCTLKIDYAKPEKLNVYKNEPDTSWDYTLSTGEM 181
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 21 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 80
G V +I F+K G QA+V+F + + A+ A+ L+G I G CTL+I Y+
Sbjct: 107 GQVLRIVIFKKN-GVQAMVEFDNLDAATRARENLNGADI-------YAGCCTLKIDYAKP 158
Query: 81 TDLSV-KFQSHRSRDYT 96
L+V K + S DYT
Sbjct: 159 EKLNVYKNEPDTSWDYT 175
>gi|294946321|ref|XP_002785022.1| polypyrimidine tract binding protein, putative [Perkinsus marinus
ATCC 50983]
gi|239898406|gb|EER16818.1| polypyrimidine tract binding protein, putative [Perkinsus marinus
ATCC 50983]
Length = 566
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 3/107 (2%)
Query: 122 LEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 181
L P + +LL +I N+ Y V + ++ V S + ++K+ +F + LIQ ++ AV
Sbjct: 122 LHPPNRILLFTITNVVYPVNVSMIAQVMSRYNALEKVVIFTRGNATHCLIQTSSLEAAVA 181
Query: 182 AKEALEGHCIYDGGFCK-LHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
AK L+G I+ C + + +S + L +K NN+RS DYT PS P
Sbjct: 182 AKTQLDGQNIFT--HCNTIRVQFSELSKLEVKYNNERSWDYTNPSLP 226
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 87/188 (46%), Gaps = 17/188 (9%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V I QV S + + K+ F + L+Q S E A +AK LDG++I +
Sbjct: 140 VNVSMIAQVMSRYNALEKVVIFTRGNATHCLIQTSSLEAAVAAKTQLDGQNIFTHC---- 195
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVA-PSAIDASGQLS---VGLDGKKLE 123
T+R+ +S + L VK+ + RS DYTNP LP P A+ SG L G+ G
Sbjct: 196 ---NTIRVQFSELSKLEVKYNNERSWDYTNPSLPSGPPGAMAGSGLLGPQQRGMSGVAAT 252
Query: 124 PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDK--NGGLQALIQYPDVQTAVV 181
P VL + ++ T D L +F+ +G V K+ + K N L + + TA+
Sbjct: 253 PVVFVLGLNEKD----TTPDDLAALFAVYGNVVKVKIMYKARNSALVQMQTVGECHTAIA 308
Query: 182 AKEALEGH 189
+ + H
Sbjct: 309 HLKGIRLH 316
>gi|195123985|ref|XP_002006482.1| GI18546 [Drosophila mojavensis]
gi|193911550|gb|EDW10417.1| GI18546 [Drosophila mojavensis]
Length = 481
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 67/115 (58%), Gaps = 7/115 (6%)
Query: 118 DGKKLEPES----NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQY 173
D ++ PE+ ++LL +I N Y +T+DVLH + + G V +I +F KN G+QA++++
Sbjct: 74 DLRRKRPETTRPNHILLFTIINPFYPITVDVLHKICNPHGQVLRIVIFKKN-GVQAMVEF 132
Query: 174 PDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI-KVNNDRSRDYTLPSTP 227
+ A A+E L G IY G C L I +++ L++ K D S DYTL + P
Sbjct: 133 DSLDAATRARENLNGADIY-AGCCTLKIDFAKPEKLNVYKNETDTSWDYTLSTEP 186
>gi|195380768|ref|XP_002049133.1| GJ21415 [Drosophila virilis]
gi|194143930|gb|EDW60326.1| GJ21415 [Drosophila virilis]
Length = 480
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 67/115 (58%), Gaps = 7/115 (6%)
Query: 118 DGKKLEPES----NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQY 173
D ++ PE+ ++LL +I N Y +T+DVLH + + G V +I +F KN G+QA++++
Sbjct: 74 DLRRKRPETTRPNHILLFTIINPFYPITVDVLHKICNPHGQVLRIVIFKKN-GVQAMVEF 132
Query: 174 PDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI-KVNNDRSRDYTLPSTP 227
+ A A+E L G IY G C L I +++ L++ K D S DYTL + P
Sbjct: 133 DSLDAATRARENLNGADIY-AGCCTLKIDFAKPEKLNVYKNETDTSWDYTLSTEP 186
>gi|401402366|ref|XP_003881231.1| gg11844, related [Neospora caninum Liverpool]
gi|325115643|emb|CBZ51198.1| gg11844, related [Neospora caninum Liverpool]
Length = 460
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 60/100 (60%), Gaps = 4/100 (4%)
Query: 128 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGL-QALIQYPDVQTAVVAKEAL 186
V+LAS+ N+ Y V +D++H +FS +G ++KI F K+ + QALIQ+ + + A A L
Sbjct: 15 VVLASVTNLLYPVDIDLIHYLFSKYGEIEKIVTFSKSPTMYQALIQFQNAEQARHALMNL 74
Query: 187 EGHCIYDGGFCK-LHISYSRHTDLSIKVNNDRSRDYTLPS 225
IYDG C L I SR +L +K N +S DYT+ S
Sbjct: 75 HSRNIYDG--CNTLQIQPSRLNELVVKNNTQKSWDYTVQS 112
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKT-AGFQALVQFSDTETASSAKNALDGRSIPRYLLPE 66
+ + I +FS +G + KI TF K+ +QAL+QF + E A A L R+I
Sbjct: 27 VDIDLIHYLFSKYGEIEKIVTFSKSPTMYQALIQFQNAEQARHALMNLHSRNIYD----- 81
Query: 67 NMGPCTLRITYSAHTDLSVKFQSHRSRDYT 96
G TL+I S +L VK + +S DYT
Sbjct: 82 --GCNTLQIQPSRLNELVVKNNTQKSWDYT 109
>gi|386768305|ref|NP_001246423.1| smooth, isoform K [Drosophila melanogaster]
gi|383302595|gb|AFH08176.1| smooth, isoform K [Drosophila melanogaster]
Length = 535
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 69/119 (57%), Gaps = 7/119 (5%)
Query: 118 DGKKLEPES----NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQY 173
D ++ PE+ ++LL +I N Y +T+DVLH + G V +I +F KN G+QA++++
Sbjct: 68 DLRRKRPETTRPNHILLFTIINPFYPITVDVLHKICHPHGQVLRIVIFKKN-GVQAMVEF 126
Query: 174 PDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNN-DRSRDYTLPSTPMVNS 231
++ A A+E L G IY G C L I Y++ L++ N D S DYTL + +++
Sbjct: 127 DNLDAATRARENLNGADIY-AGCCTLKIDYAKPEKLNVYKNEPDTSWDYTLSTVATLST 184
Score = 42.0 bits (97), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 21 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 80
G V +I F+K G QA+V+F + + A+ A+ L+G I G CTL+I Y+
Sbjct: 107 GQVLRIVIFKKN-GVQAMVEFDNLDAATRARENLNGADI-------YAGCCTLKIDYAKP 158
Query: 81 TDLSV-KFQSHRSRDYT 96
L+V K + S DYT
Sbjct: 159 EKLNVYKNEPDTSWDYT 175
>gi|386768321|ref|NP_001246430.1| smooth, isoform V [Drosophila melanogaster]
gi|383302603|gb|AFH08183.1| smooth, isoform V [Drosophila melanogaster]
Length = 540
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 65/111 (58%), Gaps = 7/111 (6%)
Query: 118 DGKKLEPES----NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQY 173
D ++ PE+ ++LL +I N Y +T+DVLH + G V +I +F KN G+QA++++
Sbjct: 68 DLRRKRPETTRPNHILLFTIINPFYPITVDVLHKICHPHGQVLRIVIFKKN-GVQAMVEF 126
Query: 174 PDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNN-DRSRDYTL 223
++ A A+E L G IY G C L I Y++ L++ N D S DYTL
Sbjct: 127 DNLDAATRARENLNGADIY-AGCCTLKIDYAKPEKLNVYKNEPDTSWDYTL 176
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 12/87 (13%)
Query: 21 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 80
G V +I F+K G QA+V+F + + A+ A+ L+G I G CTL+I Y+
Sbjct: 107 GQVLRIVIFKKN-GVQAMVEFDNLDAATRARENLNGADI-------YAGCCTLKIDYAKP 158
Query: 81 TDLSV-KFQSHRSRDY---TNPYLPVA 103
L+V K + S DY T LP+A
Sbjct: 159 EKLNVYKNEPDTSWDYTLSTGEILPIA 185
>gi|386768329|ref|NP_001246434.1| smooth, isoform AA [Drosophila melanogaster]
gi|383302607|gb|AFH08187.1| smooth, isoform AA [Drosophila melanogaster]
Length = 508
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 65/111 (58%), Gaps = 7/111 (6%)
Query: 118 DGKKLEPES----NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQY 173
D ++ PE+ ++LL +I N Y +T+DVLH + G V +I +F KN G+QA++++
Sbjct: 63 DLRRKRPETTRPNHILLFTIINPFYPITVDVLHKICHPHGQVLRIVIFKKN-GVQAMVEF 121
Query: 174 PDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNN-DRSRDYTL 223
++ A A+E L G IY G C L I Y++ L++ N D S DYTL
Sbjct: 122 DNLDAATRARENLNGADIY-AGCCTLKIDYAKPEKLNVYKNEPDTSWDYTL 171
Score = 44.7 bits (104), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 57/118 (48%), Gaps = 14/118 (11%)
Query: 21 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 80
G V +I F+K G QA+V+F + + A+ A+ L+G I G CTL+I Y+
Sbjct: 102 GQVLRIVIFKKN-GVQAMVEFDNLDAATRARENLNGADI-------YAGCCTLKIDYAKP 153
Query: 81 TDLSV-KFQSHRSRDY---TNPYLPVAPSAIDASGQLSVGLDGKKL--EPESNVLLAS 132
L+V K + S DY T LP+ S L L GK L PE+ V+L S
Sbjct: 154 EKLNVYKNEPDTSWDYTLSTGEILPIKEIGNGRSPLLQEPLYGKSLFSIPENVVMLES 211
>gi|391333478|ref|XP_003741140.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like
[Metaseiulus occidentalis]
Length = 485
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 70/119 (58%), Gaps = 3/119 (2%)
Query: 104 PSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDK 163
P +D +G+ + L+P ++++L +I N Y + ++V++ + G VQ+I +F K
Sbjct: 2 PFDMDDNGRAPKRQRTEALKP-NHIVLMTIRNALYPIDVEVIYKISHTLGRVQRIVIFRK 60
Query: 164 NGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 222
N G+QAL+++ +V A AK L+G IY G C L + Y++ + L++ N+ + DYT
Sbjct: 61 N-GVQALVEFENVDQATRAKNELDGADIYQ-GCCTLKLEYAKPSKLNVYKNDKDTWDYT 117
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V I ++ G V +I F K G QALV+F + + A+ AKN LDG I +
Sbjct: 37 IDVEVIYKISHTLGRVQRIVIFRKN-GVQALVEFENVDQATRAKNELDGADIYQ------ 89
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYT 96
G CTL++ Y+ + L+V + DYT
Sbjct: 90 -GCCTLKLEYAKPSKLNVYKNDKDTWDYT 117
>gi|149641747|ref|XP_001507993.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L, partial
[Ornithorhynchus anatinus]
Length = 360
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 86/177 (48%), Gaps = 22/177 (12%)
Query: 143 DVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 202
DVL+ V + G VQ+I +F +NG +QA++++ V A AK AL G IY G C L I
Sbjct: 1 DVLYTVCNPVGKVQRIVIFKRNG-IQAMVEFESVLCAQKAKAALNGADIY-AGCCTLKIE 58
Query: 203 YSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQYNGAQFAPPPPE 262
Y+R T L++ N++ S DYT P + + G+Q ++G + + + P
Sbjct: 59 YARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILGEHPSSFRHDGYGSHGPL 115
Query: 263 QPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPPGSMPMGPGMMQMHM 309
P+ P+ G+ +P AS S GN P GS+ M G+ Q+ M
Sbjct: 116 LPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PSGSVVMVSGLHQLKM 165
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCT 72
+ V + G V +I F++ G QA+V+F A AK AL+G I G CT
Sbjct: 3 LYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAALNGADI-------YAGCCT 54
Query: 73 LRITYSAHTDLSVKFQSHRSRDYTNPYL 100
L+I Y+ T L+V + S DYT PYL
Sbjct: 55 LKIEYARPTRLNVIRNDNDSWDYTKPYL 82
>gi|339233762|ref|XP_003381998.1| putative RNA recognition motif protein [Trichinella spiralis]
gi|316979122|gb|EFV61952.1| putative RNA recognition motif protein [Trichinella spiralis]
Length = 820
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 65/115 (56%), Gaps = 2/115 (1%)
Query: 118 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 177
D + E SNVL+ ++N +Y +T +V+H + G V +I + ++ G+QAL+++ D++
Sbjct: 109 DQLETEAPSNVLIIYVQNAKYPITTEVIHQICKPIGFVNRI-IINRRDGIQALVEFRDIE 167
Query: 178 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQ 232
TA VAK+ L G IY G C + I +++ L R+ P+ P+ N+Q
Sbjct: 168 TARVAKQRLNGCDIY-SGCCTVKIEFAKVQFLDSYKQTTRTCKAYTPNVPVTNAQ 221
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 44/90 (48%), Gaps = 8/90 (8%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCT 72
I Q+ GFV++I + G QALV+F D ETA AK L+G I G CT
Sbjct: 136 IHQICKPIGFVNRII-INRRDGIQALVEFRDIETARVAKQRLNGCDI-------YSGCCT 187
Query: 73 LRITYSAHTDLSVKFQSHRSRDYTNPYLPV 102
++I ++ L Q+ R+ P +PV
Sbjct: 188 VKIEFAKVQFLDSYKQTTRTCKAYTPNVPV 217
>gi|194881395|ref|XP_001974833.1| GG20898 [Drosophila erecta]
gi|190658020|gb|EDV55233.1| GG20898 [Drosophila erecta]
Length = 210
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 66/113 (58%), Gaps = 7/113 (6%)
Query: 118 DGKKLEPES----NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQY 173
D ++ PE+ ++LL +I N Y +T+DVLH + G V +I +F KN G+QA++++
Sbjct: 68 DLRRKRPETTRPNHILLFTIINPFYPITVDVLHKICHPHGQVLRIVIFKKN-GVQAMVEF 126
Query: 174 PDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNN-DRSRDYTLPS 225
++ A A+E L G IY G C L I Y++ L++ N D S DYTL +
Sbjct: 127 DNLDAATRARENLNGADIY-AGCCTLKIDYAKPEKLNVYKNEPDTSWDYTLST 178
Score = 41.6 bits (96), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 21 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 80
G V +I F+K G QA+V+F + + A+ A+ L+G I G CTL+I Y+
Sbjct: 107 GQVLRIVIFKKN-GVQAMVEFDNLDAATRARENLNGADI-------YAGCCTLKIDYAKP 158
Query: 81 TDLSV-KFQSHRSRDYT 96
L+V K + S DYT
Sbjct: 159 EKLNVYKNEPDTSWDYT 175
>gi|256071583|ref|XP_002572119.1| heterogeneous nuclear ribonucleoprotein [Schistosoma mansoni]
gi|350645120|emb|CCD60181.1| heterogeneous nuclear ribonucleoprotein l (hnrnp l), putative
[Schistosoma mansoni]
Length = 710
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 111/237 (46%), Gaps = 49/237 (20%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSD----TETASSAKNALDGRSIPRYLLPENM 68
++ +FS +G + +G ALV+F + T AK + P +
Sbjct: 63 LIGLFSRYGQIKNAKLV--CSGRAALVEFCEISPPTRLVHMAK-----------INPFLV 109
Query: 69 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNV 128
GP +R+ +S+ T V + H+S+ SA+D++ +++
Sbjct: 110 GPNRVRLEFSSETITPVIDRKHQSQS----------SALDSNS-------------PTHI 146
Query: 129 LLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKN--GGLQALIQYPDVQTAVVAKEAL 186
L I N +Y +T+DV+ + S G + + + KN L+AL+++ +V+ A AKE L
Sbjct: 147 LHLDISNAEYPITVDVIKAICSPHGNILRTFIGKKNVDRSLEALVEFENVEEARAAKEQL 206
Query: 187 EGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS----TPMVNS--QPSILG 237
+G IY G C L ++YSR + + N+ S D+T PS P+ NS Q ++LG
Sbjct: 207 DGADIYS-GCCNLTVAYSRLQRVHVTQNDSESWDFTGPSGNLEGPLNNSSTQRTLLG 262
>gi|68068337|ref|XP_676078.1| polypyrimidine tract binding protein [Plasmodium berghei strain
ANKA]
gi|56495606|emb|CAH97516.1| polypyrimidine tract binding protein, putative [Plasmodium berghei]
Length = 453
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 59/102 (57%), Gaps = 4/102 (3%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGL-QALIQYPDVQTAVVAKE 184
S V+L S+ NMQY V +++++ +FS G V+KI K + QAL+Q +Q A A +
Sbjct: 105 SKVILVSVVNMQYPVDMELIYYLFSKCGIVEKIITISKKTSIFQALVQLESIQVAKEAIK 164
Query: 185 ALEGHCIYDGGFCK-LHISYSRHTDLSIKVNNDRSRDYTLPS 225
L IYDG C L I YS +L IK NN ++ DYT P+
Sbjct: 165 TLHNRNIYDG--CNTLQIQYSFLKELIIKNNNSQAWDYTTPN 204
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 101/235 (42%), Gaps = 43/235 (18%)
Query: 13 ILQVFSAFGFVHKITTF-EKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPC 71
I +FS G V KI T +KT+ FQALVQ + A A L R+I G
Sbjct: 124 IYYLFSKCGIVEKIITISKKTSIFQALVQLESIQVAKEAIKTLHNRNIYD-------GCN 176
Query: 72 TLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGL------DGKKLE-- 123
TL+I YS +L +K + ++ DYT P + + S Q S G+ + K+ E
Sbjct: 177 TLQIQYSFLKELIIKNNNSQAWDYTTP--NPQKNKNNFSFQTSHGVLPTPTRNIKETELY 234
Query: 124 --PESNVLLASIENMQYAVT--------------LDVLHMVFSAFGPVQKIAMFDKNGGL 167
E + E + T ++ L +FS +G V +I + +
Sbjct: 235 KLLERKFKIVDFETKNTSKTPVLICYNIPKDYSDVNKLFNLFSVYGYVSRIKILREKPD- 293
Query: 168 QALIQYPDVQTAVVAKEALEGHCIYDGGFCK--LHISYSRHTDLSIKVNNDRSRD 220
ALIQY + + +A+E C+ C+ L + +S+ D+ I D++RD
Sbjct: 294 SALIQYSNYLFSSLAQE-----CLQHAKICQNILELHFSKIYDIKISY-QDKNRD 342
>gi|237838325|ref|XP_002368460.1| polypyrimidine track-binding protein, putative [Toxoplasma gondii
ME49]
gi|211966124|gb|EEB01320.1| polypyrimidine track-binding protein, putative [Toxoplasma gondii
ME49]
Length = 446
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 61/105 (58%), Gaps = 5/105 (4%)
Query: 124 PES-NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGL-QALIQYPDVQTAVV 181
PES V+LAS+ N+ Y V +D++H +FS +G ++KI F K+ + QALIQ+ A
Sbjct: 10 PESFRVVLASVTNLLYPVDIDLIHYLFSKYGEIEKIVTFSKSPTMYQALIQFQSPDQARH 69
Query: 182 AKEALEGHCIYDGGFCK-LHISYSRHTDLSIKVNNDRSRDYTLPS 225
A L IYDG C L I SR +L +K N +S DYT+ S
Sbjct: 70 ALMNLHSRNIYDG--CNTLQIQPSRLNELVVKNNTQKSWDYTVQS 112
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKT-AGFQALVQFSDTETASSAKNALDGRSIPRYLLPE 66
+ + I +FS +G + KI TF K+ +QAL+QF + A A L R+I
Sbjct: 27 VDIDLIHYLFSKYGEIEKIVTFSKSPTMYQALIQFQSPDQARHALMNLHSRNIYD----- 81
Query: 67 NMGPCTLRITYSAHTDLSVKFQSHRSRDYT 96
G TL+I S +L VK + +S DYT
Sbjct: 82 --GCNTLQIQPSRLNELVVKNNTQKSWDYT 109
>gi|221484270|gb|EEE22566.1| polypyrimidine track-binding protein, putative [Toxoplasma gondii
GT1]
gi|221505749|gb|EEE31394.1| polypyrimidine track-binding protein, putative [Toxoplasma gondii
VEG]
Length = 446
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 61/105 (58%), Gaps = 5/105 (4%)
Query: 124 PES-NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGL-QALIQYPDVQTAVV 181
PES V+LAS+ N+ Y V +D++H +FS +G ++KI F K+ + QALIQ+ A
Sbjct: 10 PESFRVVLASVTNLLYPVDIDLIHYLFSKYGEIEKIVTFSKSPTMYQALIQFQSPDQARH 69
Query: 182 AKEALEGHCIYDGGFCK-LHISYSRHTDLSIKVNNDRSRDYTLPS 225
A L IYDG C L I SR +L +K N +S DYT+ S
Sbjct: 70 ALMNLHSRNIYDG--CNTLQIQPSRLNELVVKNNTQKSWDYTVQS 112
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKT-AGFQALVQFSDTETASSAKNALDGRSIPRYLLPE 66
+ + I +FS +G + KI TF K+ +QAL+QF + A A L R+I
Sbjct: 27 VDIDLIHYLFSKYGEIEKIVTFSKSPTMYQALIQFQSPDQARHALMNLHSRNIYD----- 81
Query: 67 NMGPCTLRITYSAHTDLSVKFQSHRSRDYT 96
G TL+I S +L VK + +S DYT
Sbjct: 82 --GCNTLQIQPSRLNELVVKNNTQKSWDYT 109
>gi|70926044|ref|XP_735622.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56509445|emb|CAH87610.1| hypothetical protein PC302548.00.0 [Plasmodium chabaudi chabaudi]
Length = 201
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 61/111 (54%), Gaps = 5/111 (4%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGL-QALIQYPDVQTAVVAKE 184
S V+L S+ NMQY V +++++ +FS G V+KI K + QAL+Q ++ A A +
Sbjct: 79 SKVILVSVVNMQYPVDIELIYYLFSKCGVVEKIITISKKTSIFQALVQLESIEVAKEAIK 138
Query: 185 ALEGHCIYDGGFCK-LHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPS 234
L IYDG C L I YS +L +K NN +S DYT S P N S
Sbjct: 139 TLHNRNIYDG--CNTLQIQYSFLKELIVKNNNSQSWDYT-TSNPQRNKSNS 186
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTF-EKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPE 66
+ + I +FS G V KI T +KT+ FQALVQ E A A L R+I
Sbjct: 93 VDIELIYYLFSKCGVVEKIITISKKTSIFQALVQLESIEVAKEAIKTLHNRNIYD----- 147
Query: 67 NMGPCTLRITYSAHTDLSVKFQSHRSRDYT 96
G TL+I YS +L VK + +S DYT
Sbjct: 148 --GCNTLQIQYSFLKELIVKNNNSQSWDYT 175
>gi|112280295|gb|ABI14681.1| polypyrimidine tract binding protein [Plasmodium chabaudi chabaudi]
gi|112280297|gb|ABI14682.1| polypyrimidine tract binding protein [Plasmodium chabaudi chabaudi]
Length = 142
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 61/111 (54%), Gaps = 5/111 (4%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGL-QALIQYPDVQTAVVAKE 184
S V+L S+ NMQY V +++++ +FS G V+KI K + QAL+Q ++ A A +
Sbjct: 28 SKVILVSVVNMQYPVDIELIYYLFSKCGVVEKIITISKKTSIFQALVQLESIEVAKEAIK 87
Query: 185 ALEGHCIYDGGFCK-LHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPS 234
L IYDG C L I YS +L +K NN +S DYT S P N S
Sbjct: 88 TLHNRNIYDG--CNTLQIQYSFLKELIVKNNNSQSWDYT-TSNPQRNKNNS 135
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 43/86 (50%), Gaps = 8/86 (9%)
Query: 12 FILQVFSAFGFVHKITTF-EKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGP 70
I +FS G V KI T +KT+ FQALVQ E A A L R+I G
Sbjct: 46 LIYYLFSKCGVVEKIITISKKTSIFQALVQLESIEVAKEAIKTLHNRNIYD-------GC 98
Query: 71 CTLRITYSAHTDLSVKFQSHRSRDYT 96
TL+I YS +L VK + +S DYT
Sbjct: 99 NTLQIQYSFLKELIVKNNNSQSWDYT 124
>gi|414872529|tpg|DAA51086.1| TPA: hypothetical protein ZEAMMB73_223567 [Zea mays]
Length = 357
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 39/51 (76%), Gaps = 3/51 (5%)
Query: 10 VIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIP 60
+I VFSAFG+VHKI TFEK QAL+Q++D TAS+A+ +LDGRSIP
Sbjct: 266 IICTRLVFSAFGYVHKIATFEK---LQALIQYTDAATASAARESLDGRSIP 313
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Query: 146 HMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLH 200
+VFSAFG V KIA F+K LQALIQY D TA A+E+L+G I G LH
Sbjct: 270 RLVFSAFGYVHKIATFEK---LQALIQYTDAATASAARESLDGRSIPSGNLLMLH 321
>gi|55733800|gb|AAV59307.1| putative polypyrimidine track-binding protein [Oryza sativa
Japonica Group]
Length = 389
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 53/92 (57%)
Query: 97 NPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQ 156
N Y+ + + Q S G + + + +LL +I +M Y +T++VLH VF A+G V+
Sbjct: 64 NVYMQFSSHQELTTDQNSHGRNSDQESEPNRILLVTIHHMMYPITVEVLHQVFKAYGYVE 123
Query: 157 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEG 188
KI F K+ G QALIQY +Q A+ A AL G
Sbjct: 124 KIVTFQKSAGFQALIQYQSLQEAMDAFGALHG 155
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 98/217 (45%), Gaps = 32/217 (14%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
QVF A+G+V KI TF+K+AGFQAL+Q+ + A A AL G P ++ L
Sbjct: 114 QVFKAYGYVEKIVTFQKSAGFQALIQYQSLQEAMDAFGALHGFHKP--IIAYRTASKGLS 171
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIE 134
+Y+ Q R+ T + G L G+ G E L+ S
Sbjct: 172 ASYA---------QMGRAAMITAAF----------GGTLPPGVTGTN---ERCTLIVSNL 209
Query: 135 NMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDG 194
N + D L +FS +G + +I + +N AL++ D A +A L+G ++
Sbjct: 210 NTD-KINEDKLFNLFSLYGNIVRIKIL-RNKPDHALVEMADGFQAELAVHYLKGAVLFAK 267
Query: 195 GFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNS 231
KL ++YS++ +++ + + DYT S NS
Sbjct: 268 ---KLEVNYSKYPNIT---SAPDAHDYTTSSLNRFNS 298
>gi|341890178|gb|EGT46113.1| hypothetical protein CAEBREN_06779 [Caenorhabditis brenneri]
Length = 601
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 80/162 (49%), Gaps = 12/162 (7%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VL+ ++ N QY + DV++ + +A G V ++A+ K +QAL+++ ++ A AK A
Sbjct: 121 NKVLVVTVLNAQYPIDADVIYQISNAQGKVLRVAVMHKPTIVQALVEFESMEVAKAAKHA 180
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPST--PMVNSQPSILGQQPVPM 243
+ G IY G C L + +++ + + + RD+TLP P + + +++ +P
Sbjct: 181 MNGADIY-SGCCTLKVEFAKPDRVRVVRQDKDQRDFTLPDNEVPQDSGRKTLIPSRPDDH 239
Query: 244 ------VGATANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPP 279
+ Y+ +AP PP QP P GA PP
Sbjct: 240 YYDRRPYEEERDPYDRRDYAPQPPPQPHYGYPPR---GAGPP 278
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 7/86 (8%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCT 72
I Q+ +A G V ++ K QALV+F E A +AK+A++G I G CT
Sbjct: 140 IYQISNAQGKVLRVAVMHKPTIVQALVEFESMEVAKAAKHAMNGADI-------YSGCCT 192
Query: 73 LRITYSAHTDLSVKFQSHRSRDYTNP 98
L++ ++ + V Q RD+T P
Sbjct: 193 LKVEFAKPDRVRVVRQDKDQRDFTLP 218
>gi|281205212|gb|EFA79405.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 437
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Query: 148 VFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHT 207
+FS +G V +I +F K G LQA +++ +A VAK+AL G IY G C L I ++R
Sbjct: 120 IFSPYGRVLRIVIFQKKG-LQAFVEFESPYSAWVAKDALNGQDIYTGS-CTLQIDFARVN 177
Query: 208 DLSIKVNNDRSRDYTL 223
L++KVN++++ DYT+
Sbjct: 178 KLNVKVNDEKTTDYTM 193
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 113/254 (44%), Gaps = 60/254 (23%)
Query: 11 IFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGP 70
+F ++FS +G V +I F+K G QA V+F +A AK+AL+G+ I G
Sbjct: 115 LFGQKIFSPYGRVLRIVIFQK-KGLQAFVEFESPYSAWVAKDALNGQDI-------YTGS 166
Query: 71 CTLRITYSAHTDLSVKFQSHRSRDYTNPYL--------------PVAPSAIDASG----- 111
CTL+I ++ L+VK ++ DYT + P AP+ +D +G
Sbjct: 167 CTLQIDFARVNKLNVKVNDEKTTDYTMDLIQPPGAPIGMTAHGYPFAPAHMDPTGFTKQS 226
Query: 112 --------------QLSVGLD-------GKKLEPESNVLLASIENMQYAVTLDVLHMVFS 150
+VG+ G +EP + ++ + + +T D L +F
Sbjct: 227 AYMMNPSAAAAAPHPSAVGVQPHHPGFMGYPMEPMTQSVIM-VHKLPENITADQLFNIFC 285
Query: 151 AFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFC--KLHISYSRHTD 208
+G V KI M N A++Q D + A A+ HC+ K+ + +SRH
Sbjct: 286 LYGTVLKIKML-HNTKSGAMVQMAD---GIQADSAI--HCLNLANIFGQKIQVFHSRHPS 339
Query: 209 LSIKVNNDRSRDYT 222
++ ++++++DY+
Sbjct: 340 IA---DSEKTKDYS 350
>gi|345494580|ref|XP_001604099.2| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Nasonia
vitripennis]
Length = 520
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 66/140 (47%), Gaps = 42/140 (30%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYP----------- 174
++VLL +I N Y +T++VLH + G VQ+I +F KNG +QA+++YP
Sbjct: 33 NHVLLFTIINPVYPITVEVLHAISHQSGTVQRIVIFKKNG-VQAMVEYPLHTAILLFVVF 91
Query: 175 -----------------------------DVQTAVVAKEALEGHCIYDGGFCKLHISYSR 205
V++A AKEAL G IY G C L I Y++
Sbjct: 92 FFFLFNCMLISITTSYPKSLTEFFEITFDSVESATRAKEALHGADIYSG-CCTLKIDYAK 150
Query: 206 HTDLSIKVNNDRSRDYTLPS 225
T L++ N+ S DYT P+
Sbjct: 151 PTKLNVYKNDSESWDYTTPA 170
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 33/74 (44%), Gaps = 7/74 (9%)
Query: 39 VQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNP 98
+ F E+A+ AK AL G I G CTL+I Y+ T L+V S DYT P
Sbjct: 117 ITFDSVESATRAKEALHGADI-------YSGCCTLKIDYAKPTKLNVYKNDSESWDYTTP 169
Query: 99 YLPVAPSAIDASGQ 112
+ D SG
Sbjct: 170 AIGAGSHKNDTSGN 183
>gi|302782656|ref|XP_002973101.1| hypothetical protein SELMODRAFT_99329 [Selaginella moellendorffii]
gi|300158854|gb|EFJ25475.1| hypothetical protein SELMODRAFT_99329 [Selaginella moellendorffii]
Length = 410
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 68/133 (51%), Gaps = 23/133 (17%)
Query: 123 EPE------SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDV 176
EPE S VLLA I N Y + +D+LH VFS G ++KI +F K +QA I +
Sbjct: 67 EPENPKVEASRVLLAIIHNPLYQMNVDILHQVFSPHGNIEKIVIFHKAAAVQAFIVFDSD 126
Query: 177 QTAVVAKEALEGHCIYDGGFCKLHISYS-------RHTDLSIKVNNDRSRDYTLPSTP-- 227
+ A AK AL+G I+DG CKL I +S + +K+N RDYT S P
Sbjct: 127 EAAAAAKSALQGRQIFDGC-CKLDIKFSIFAFRFLGNYKEPVKMN----RDYTNNSLPGD 181
Query: 228 ---MVNSQPSILG 237
+ Q SILG
Sbjct: 182 SQSKTSPQASILG 194
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 112/256 (43%), Gaps = 54/256 (21%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + QVFS G + KI F K A QA + F E A++AK+AL GR I
Sbjct: 90 MNVDILHQVFSPHGNIEKIVIFHKAAAVQAFIVFDSDEAAAAAKSALQGRQIFD------ 143
Query: 68 MGPCTLRITYSAHTDLSVKFQSHR------SRDYTNPYLP------VAPSA--------- 106
G C L I +S + +F + +RDYTN LP +P A
Sbjct: 144 -GCCKLDIKFSI---FAFRFLGNYKEPVKMNRDYTNNSLPGDSQSKTSPQASILGAGTAF 199
Query: 107 ----------IDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQ 156
+ SG L G+ G + +L++++ + V + L +FS +G V
Sbjct: 200 STMKQGGFGSVPLSGVLPFGVTGSN--DKCTLLVSNLH--EVLVYEEKLFNLFSGYGRVL 255
Query: 157 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 216
+I MF+ QAL+Q D A +A L+G + + IS+S+H + +
Sbjct: 256 RIKMFE--NAKQALVQLADGVQAELALNFLKGAPLLGSA---MEISFSKHN----TIRHP 306
Query: 217 RSRDYTLPSTPMVNSQ 232
R+RD+T+ NS+
Sbjct: 307 RTRDFTMDPYNRFNSE 322
>gi|47208707|emb|CAF90432.1| unnamed protein product [Tetraodon nigroviridis]
Length = 499
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 60/106 (56%), Gaps = 7/106 (6%)
Query: 140 VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKL 199
+T DVL+ V + G V +I +F +NG +QA++++ V A AK AL G IY G C L
Sbjct: 136 LTQDVLYTVCNPVGNVLRIVIFKRNG-IQAMVEFESVHCAQKAKAALNGADIY-AGCCTL 193
Query: 200 HISYSRHTDLSIKVNNDRSRDYTLPSTPMVNS-----QPSILGQQP 240
I Y+R T L++ N++ S DYT P + + +ILG+ P
Sbjct: 194 KIEYARPTRLNVIKNDNESWDYTKPYLVRRDRGKGRQRQAILGEHP 239
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCT 72
+ V + G V +I F++ G QA+V+F A AK AL+G I G CT
Sbjct: 141 LYTVCNPVGNVLRIVIFKRN-GIQAMVEFESVHCAQKAKAALNGADI-------YAGCCT 192
Query: 73 LRITYSAHTDLSVKFQSHRSRDYTNPYL 100
L+I Y+ T L+V + S DYT PYL
Sbjct: 193 LKIEYARPTRLNVIKNDNESWDYTKPYL 220
>gi|156378504|ref|XP_001631182.1| predicted protein [Nematostella vectensis]
gi|156218218|gb|EDO39119.1| predicted protein [Nematostella vectensis]
Length = 513
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 64/121 (52%), Gaps = 4/121 (3%)
Query: 110 SGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQA 169
S Q+S + + + +LL +I N QY VT D+LH +FS G VQ+I +F K+ GLQA
Sbjct: 123 SKQISRNVHVRSETQPNKILLITIINPQYVVTTDILHTIFSKQGMVQRIVIFRKS-GLQA 181
Query: 170 LIQ---YPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPST 226
+++ + V+ A AKE L G IY G S L+++ N+ + DYT
Sbjct: 182 MVEESRFDCVEAARHAKETLNGADIYTGCNTLKIESQGYAQQLNVRKNDSETYDYTQDKG 241
Query: 227 P 227
P
Sbjct: 242 P 242
>gi|146197853|dbj|BAF57638.1| hnRNP L protein [Dugesia japonica]
Length = 543
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 73/134 (54%), Gaps = 8/134 (5%)
Query: 100 LPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA 159
L + +ID +S G+ + + VL I N Y++T+DVL+ + S +G V +I
Sbjct: 56 LSFSQQSIDEFKSISKPNFGRNI---TKVLHFLITNAVYSITVDVLNKICSPYGKVARIY 112
Query: 160 MFDKN---GGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 216
+ KN ++ALI++ A + KE L+G+ IY G C L +SYS+ + ++ N+
Sbjct: 113 IGKKNDQDNSIEALIEFSTDNDAKIVKENLDGNDIY-SGCCSLKLSYSKIHKIHVEKNDS 171
Query: 217 RSRDYTL-PSTPMV 229
S DYTL P T ++
Sbjct: 172 ESFDYTLVPKTGLL 185
>gi|431909696|gb|ELK12854.1| Heterogeneous nuclear ribonucleoprotein L [Pteropus alecto]
Length = 629
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 93/221 (42%), Gaps = 60/221 (27%)
Query: 99 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 156
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 160 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 219
Query: 157 KIAMFDKNGGLQALIQYP------------------------------------DVQTAV 180
+I +F KN G+QA+++YP V V
Sbjct: 220 RIVIFRKN-GVQAMVEYPLLGNGFLAAGALKAGRGATLSTSVYTGCLPCAKCLHSVMGEV 278
Query: 181 V-------AKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS-----TPM 228
V AK +L G IY G C L I Y++ T L++ N+ + DYT P+ P
Sbjct: 279 VSKPSAQRAKASLNGADIYS-GCCTLKIEYAKPTRLNVFKNDQDTWDYTNPNLSGQGDPG 337
Query: 229 VN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 261
N QP +LG P G + Y+ + PPPP
Sbjct: 338 SNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 378
>gi|313237439|emb|CBY12627.1| unnamed protein product [Oikopleura dioica]
Length = 873
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 2/106 (1%)
Query: 118 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 177
D K P +VLL +I + Y +T +L + S GPV +I +F K +QA+I++ +
Sbjct: 691 DSKNPNPPGHVLLLTILDAMYPITTKLLERICSYAGPVLRIVIFRKK-SVQAMIEFDSIV 749
Query: 178 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTL 223
A AK AL G IY G C + + Y++ L++ N+D +RD+++
Sbjct: 750 GAQRAKAALNGVDIYR-GCCTIKVEYAKPQSLNVFKNDDNTRDFSV 794
>gi|386768315|ref|NP_725913.2| smooth, isoform P [Drosophila melanogaster]
gi|383302600|gb|AAM68420.2| smooth, isoform P [Drosophila melanogaster]
Length = 434
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 68/142 (47%), Gaps = 20/142 (14%)
Query: 134 ENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYD 193
EN + DVLH + G V +I +F KNG +QA++++ ++ A A+E L G IY
Sbjct: 42 ENDVHMHARDVLHKICHPHGQVLRIVIFKKNG-VQAMVEFDNLDAATRARENLNGADIY- 99
Query: 194 GGFCKLHISYSRHTDLSIKVNN-DRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQYN 252
G C L I Y++ L++ N D S DYTL ST + +P +LG
Sbjct: 100 AGCCTLKIDYAKPEKLNVYKNEPDTSWDYTL-STGEILPKPPLLGP-------------- 144
Query: 253 GAQFAPPPPEQPMMHQPTAAGW 274
GA F PP P H T W
Sbjct: 145 GAAF--PPFGAPEYHTTTPENW 164
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 21 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 80
G V +I F+K G QA+V+F + + A+ A+ L+G I G CTL+I Y+
Sbjct: 61 GQVLRIVIFKKN-GVQAMVEFDNLDAATRARENLNGADI-------YAGCCTLKIDYAKP 112
Query: 81 TDLSV-KFQSHRSRDYT 96
L+V K + S DYT
Sbjct: 113 EKLNVYKNEPDTSWDYT 129
>gi|324503755|gb|ADY41626.1| Heterogeneous nuclear ribonucleoprotein L, partial [Ascaris suum]
Length = 614
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 58/104 (55%), Gaps = 2/104 (1%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + E ++VL+ +I N QY VT+DV+H + G V++IAM + LQAL+++
Sbjct: 106 GLESEHPNHVLILTIYNAQYPVTVDVIHQICEPHGFVKRIAMI-RRTMLQALVEFESADV 164
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 222
A AK A+ G IY G C L + +++ + + N+ DYT
Sbjct: 165 AKKAKHAMNGADIY-SGCCTLKVEFAKPDHVKVTRNDQDQWDYT 207
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 8/89 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V I Q+ GFV +I +T QALV+F + A AK+A++G I
Sbjct: 127 VTVDVIHQICEPHGFVKRIAMIRRTM-LQALVEFESADVAKKAKHAMNGADI-------Y 178
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYT 96
G CTL++ ++ + V DYT
Sbjct: 179 SGCCTLKVEFAKPDHVKVTRNDQDQWDYT 207
>gi|324504296|gb|ADY41855.1| Heterogeneous nuclear ribonucleoprotein L, partial [Ascaris suum]
Length = 626
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 58/104 (55%), Gaps = 2/104 (1%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + E ++VL+ +I N QY VT+DV+H + G V++IAM + LQAL+++
Sbjct: 106 GLESEHPNHVLILTIYNAQYPVTVDVIHQICEPHGFVKRIAMI-RRTMLQALVEFESADV 164
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 222
A AK A+ G IY G C L + +++ + + N+ DYT
Sbjct: 165 AKKAKHAMNGADIY-SGCCTLKVEFAKPDHVKVTRNDQDQWDYT 207
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 8/89 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V I Q+ GFV +I +T QALV+F + A AK+A++G I
Sbjct: 127 VTVDVIHQICEPHGFVKRIAMIRRTM-LQALVEFESADVAKKAKHAMNGADI-------Y 178
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYT 96
G CTL++ ++ + V DYT
Sbjct: 179 SGCCTLKVEFAKPDHVKVTRNDQDQWDYT 207
>gi|47209150|emb|CAF89890.1| unnamed protein product [Tetraodon nigroviridis]
Length = 569
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 80/178 (44%), Gaps = 29/178 (16%)
Query: 20 FGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR----- 74
FG V K+ T + A Q ++ + E A + N P T+R
Sbjct: 31 FGRVSKLITLK--AKNQGFLEMASEEAAITMMNYYTS------------APPTIRNQPVF 76
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPY--LPVAPSAIDASGQLSVGLDGKK-LEPESNVLLA 131
I YS H +L ++ + TN L +A SG ++ G DG+ + +S VL
Sbjct: 77 IQYSTHREL-------KTDNLTNQRAALQAISTASMHSGSMAAGGDGRGGVHAQSPVLRI 129
Query: 132 SIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGH 189
+EN+ Y V+L+VL +FS FG V KI F +N QAL+Q+ D A AK H
Sbjct: 130 IVENLFYPVSLEVLQQIFSKFGSVLKIITFTRNNQFQALLQFSDAVHAQHAKAVSHTH 187
>gi|71983992|ref|NP_495411.2| Protein C44B7.2, isoform a [Caenorhabditis elegans]
gi|351065573|emb|CCD61555.1| Protein C44B7.2, isoform a [Caenorhabditis elegans]
Length = 597
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VL+ ++ N QY + DV++ + +A G V ++A+ K +QAL+++ ++ A AK A
Sbjct: 120 NKVLVVTVLNAQYPIDADVIYQISNAQGKVLRVAVMHKPTVVQALVEFESMEVAKAAKHA 179
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPST 226
+ G IY G C L + +++ + ++ + RD+TLP
Sbjct: 180 MNGADIY-SGCCTLKVEFAKPDRVRVQRQDKDQRDFTLPDN 219
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCT 72
I Q+ +A G V ++ K QALV+F E A +AK+A++G I G CT
Sbjct: 139 IYQISNAQGKVLRVAVMHKPTVVQALVEFESMEVAKAAKHAMNGADI-------YSGCCT 191
Query: 73 LRITYSAHTDLSVKFQSHRSRDYTNP 98
L++ ++ + V+ Q RD+T P
Sbjct: 192 LKVEFAKPDRVRVQRQDKDQRDFTLP 217
>gi|7497376|pir||T15805 hypothetical protein C44B7.2 - Caenorhabditis elegans
Length = 493
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VL+ ++ N QY + DV++ + +A G V ++A+ K +QAL+++ ++ A AK A
Sbjct: 123 NKVLVVTVLNAQYPIDADVIYQISNAQGKVLRVAVMHKPTVVQALVEFESMEVAKAAKHA 182
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPST 226
+ G IY G C L + +++ + ++ + RD+TLP
Sbjct: 183 MNGADIY-SGCCTLKVEFAKPDRVRVQRQDKDQRDFTLPDN 222
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCT 72
I Q+ +A G V ++ K QALV+F E A +AK+A++G I G CT
Sbjct: 142 IYQISNAQGKVLRVAVMHKPTVVQALVEFESMEVAKAAKHAMNGADI-------YSGCCT 194
Query: 73 LRITYSAHTDLSVKFQSHRSRDYTNP 98
L++ ++ + V+ Q RD+T P
Sbjct: 195 LKVEFAKPDRVRVQRQDKDQRDFTLP 220
>gi|410931471|ref|XP_003979119.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like, partial
[Takifugu rubripes]
Length = 182
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VLL SI+N Y +T DVL+ V + G V +I +F +N G+QA++++ V A AK A
Sbjct: 105 NKVLLLSIQNPLYPITTDVLYTVCNPIGNVLRIVIFKRN-GIQAMVEFESVHCAQKAKAA 163
Query: 186 LEGHCIYDGGFCKLHISYSR 205
L G IY G C L I Y+R
Sbjct: 164 LNGADIY-AGCCTLKIEYAR 182
>gi|170582502|ref|XP_001896158.1| hypothetical protein [Brugia malayi]
gi|158596691|gb|EDP34993.1| conserved hypothetical protein [Brugia malayi]
Length = 643
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 58/103 (56%), Gaps = 4/103 (3%)
Query: 122 LEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTA 179
LE E+ +VL+ +I N QY + +DV+H + G V++IAM + LQAL+++ + A
Sbjct: 532 LESETPNHVLILTIYNAQYPINVDVIHQICELHGFVRRIAMI-RRTMLQALVEFESAEIA 590
Query: 180 VVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 222
AK A+ G IY G C L + +++ + + N+ DYT
Sbjct: 591 KKAKHAMNGADIY-SGCCTLKVEFAKPEHVKVTRNDSDQWDYT 632
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 8/89 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V I Q+ GFV +I +T QALV+F E A AK+A++G I
Sbjct: 552 INVDVIHQICELHGFVRRIAMIRRTM-LQALVEFESAEIAKKAKHAMNGADIYS------ 604
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYT 96
G CTL++ ++ + V DYT
Sbjct: 605 -GCCTLKVEFAKPEHVKVTRNDSDQWDYT 632
>gi|358332176|dbj|GAA36554.2| polypyrimidine tract-binding protein 1 [Clonorchis sinensis]
Length = 543
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 99/213 (46%), Gaps = 23/213 (10%)
Query: 82 DLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN-MQYAV 140
++ ++F +H + T + + +A+ + L G + ++VL I+N M +
Sbjct: 76 NIILQFSTHTHLELTTENNAIENAVKNANRIVQQDLSGVQAGAPNSVLRIVIDNIMGQQI 135
Query: 141 TLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLH 200
+L+ +F FG + ++ +F ++ Q ++++ + A VA L G IY G C L
Sbjct: 136 NHVILYKIFHRFGKILRVLIFLRSNQYQCMLEFQNHIQAFVAMLHLNGQNIYTGC-CSLR 194
Query: 201 ISYSRHTD-LSIKVNNDRSRDYTLPSTPM----VNSQPSILGQQPVPMVGATANQYNGAQ 255
+ +SR L ++ ND+ RDYT+ +P+ +NS P PV + ATAN
Sbjct: 195 VEFSRTRGPLEVRRENDKCRDYTV--SPLLEDELNSPPP--ANVPVNQLAATAN------ 244
Query: 256 FAPPPPEQ------PMMHQPTAAGWGAVPPASQ 282
F P Q PM + P GAVP ++
Sbjct: 245 FQPNMIGQNLAVVNPMTNIPGMGTAGAVPGITE 277
>gi|302789994|ref|XP_002976765.1| hypothetical protein SELMODRAFT_443293 [Selaginella moellendorffii]
gi|300155803|gb|EFJ22434.1| hypothetical protein SELMODRAFT_443293 [Selaginella moellendorffii]
Length = 451
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
S VLLA I N Y + +D+LH VFS G ++KI +F K +QA I + + A AK A
Sbjct: 139 SRVLLAIIHNPLYQMNVDILHQVFSPHGNIEKIVIFHK-AAVQAFIVFESDEAAAAAKSA 197
Query: 186 LEGHCIYDGGFCKLHISYS 204
L+G I+DG CKL I +S
Sbjct: 198 LQGRQIFDGC-CKLDIKFS 215
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 103/247 (41%), Gaps = 58/247 (23%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V + QVFS G + KI F K A QA + F E A++AK+AL GR I
Sbjct: 153 MNVDILHQVFSPHGNIEKIVIFHK-AAVQAFIVFESDEAAAAAKSALQGRQIFD------ 205
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLP------VAPSA--------------- 106
G C L I +S DYTN LP +P A
Sbjct: 206 -GCCKLDIKFSM--------------DYTNNSLPGDSQSKTSPQASILGAGTAFSTMKQG 250
Query: 107 -IDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNG 165
+ SG L G+ G + LL S N+ + L +FS +G V +I MF+
Sbjct: 251 SVPLSGVLPFGVTGSN---DKCTLLVS--NLHERTDEEKLFNLFSGYGRVLRIKMFE--N 303
Query: 166 GLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 225
QAL+Q D A +A L+G + + IS+S+H + + R+RD+T+
Sbjct: 304 AKQALVQLADGIQAELALNFLKGAPLLGSA---MEISFSKHN----TIRHPRTRDFTMDP 356
Query: 226 TPMVNSQ 232
NS+
Sbjct: 357 YNRFNSE 363
>gi|393907053|gb|EJD74501.1| serologically defined colon cancer antigen 1 [Loa loa]
Length = 1568
Score = 61.2 bits (147), Expect = 6e-07, Method: Composition-based stats.
Identities = 34/104 (32%), Positives = 59/104 (56%), Gaps = 2/104 (1%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + E ++VL+ +I N QY + +DV+H + G V++IAM + LQAL+++ +
Sbjct: 1044 GLESESPNHVLILTIYNAQYPINVDVIHQICELHGFVKRIAMIRRT-MLQALVEFESAEI 1102
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 222
A AK A+ G IY G C L + +++ + + N++ DYT
Sbjct: 1103 AKKAKHAMNGADIYS-GCCTLKVEFAKPEHVKVTRNDNDQWDYT 1145
Score = 42.7 bits (99), Expect = 0.22, Method: Composition-based stats.
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V I Q+ GFV +I +T QALV+F E A AK+A++G I
Sbjct: 1065 INVDVIHQICELHGFVKRIAMIRRTM-LQALVEFESAEIAKKAKHAMNGADI-------Y 1116
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYT 96
G CTL++ ++ + V + DYT
Sbjct: 1117 SGCCTLKVEFAKPEHVKVTRNDNDQWDYT 1145
>gi|17532395|ref|NP_495412.1| Protein C44B7.2, isoform b [Caenorhabditis elegans]
gi|351065574|emb|CCD61556.1| Protein C44B7.2, isoform b [Caenorhabditis elegans]
Length = 339
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 79/173 (45%), Gaps = 24/173 (13%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VL+ ++ N QY + DV++ + +A G V ++A+ K +QAL+++ ++ A AK A
Sbjct: 120 NKVLVVTVLNAQYPIDADVIYQISNAQGKVLRVAVMHKPTVVQALVEFESMEVAKAAKHA 179
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPST--PMVNSQ----------P 233
+ G IY G C L + +++ + ++ + RD+TLP P + + P
Sbjct: 180 MNGADIY-SGCCTLKVEFAKPDRVRVQRQDKDQRDFTLPDNRRPYEDDRNHYDRHDYQAP 238
Query: 234 SILGQQPVPMVGATANQYNGAQFAPPPP---------EQPMMHQPTAAGWGAV 277
S G G ++ Y G + PP P E QP G G V
Sbjct: 239 SSYGYS--SRGGGHSDYYGGDRGGPPHPPPSRYRDDYEDRGYAQPAGGGPGCV 289
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCT 72
I Q+ +A G V ++ K QALV+F E A +AK+A++G I G CT
Sbjct: 139 IYQISNAQGKVLRVAVMHKPTVVQALVEFESMEVAKAAKHAMNGADI-------YSGCCT 191
Query: 73 LRITYSAHTDLSVKFQSHRSRDYTNP 98
L++ ++ + V+ Q RD+T P
Sbjct: 192 LKVEFAKPDRVRVQRQDKDQRDFTLP 217
>gi|268530642|ref|XP_002630447.1| Hypothetical protein CBG11180 [Caenorhabditis briggsae]
Length = 604
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VL+ ++ N Y + DV+H + S+ G V ++A+ K +QAL+++ V+ A AK A
Sbjct: 122 NKVLVVTVLNATYPIDADVIHTISSSQGKVLRVAVMHKPTVVQALVEFESVEVAKAAKHA 181
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTL 223
+ G IY G C L + +++ + + + RD+TL
Sbjct: 182 MNGADIY-AGCCTLKVEFAKPDRVRVTRQDKDQRDFTL 218
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 7/84 (8%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCT 72
I + S+ G V ++ K QALV+F E A +AK+A++G I G CT
Sbjct: 141 IHTISSSQGKVLRVAVMHKPTVVQALVEFESVEVAKAAKHAMNGADI-------YAGCCT 193
Query: 73 LRITYSAHTDLSVKFQSHRSRDYT 96
L++ ++ + V Q RD+T
Sbjct: 194 LKVEFAKPDRVRVTRQDKDQRDFT 217
>gi|170576159|ref|XP_001893522.1| RNA binding protein [Brugia malayi]
gi|158600425|gb|EDP37644.1| RNA binding protein, putative [Brugia malayi]
Length = 659
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 58/104 (55%), Gaps = 2/104 (1%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + E ++VL+ +I N QY + +DV+H + G V++IAM + LQAL+++ +
Sbjct: 116 GLESETPNHVLILTIYNAQYPINVDVIHQICELHGFVRRIAMI-RRTMLQALVEFESAEI 174
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 222
A AK A+ G IY G C L + +++ + + N+ DYT
Sbjct: 175 AKKAKHAMNGADIY-SGCCTLKVEFAKPEHVKVTRNDSDQWDYT 217
Score = 44.3 bits (103), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 8/89 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V I Q+ GFV +I +T QALV+F E A AK+A++G I
Sbjct: 137 INVDVIHQICELHGFVRRIAMIRRTM-LQALVEFESAEIAKKAKHAMNGADIYS------ 189
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYT 96
G CTL++ ++ + V DYT
Sbjct: 190 -GCCTLKVEFAKPEHVKVTRNDSDQWDYT 217
>gi|402594034|gb|EJW87961.1| hypothetical protein WUBG_01127 [Wuchereria bancrofti]
Length = 608
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 58/104 (55%), Gaps = 2/104 (1%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + E ++VL+ +I N QY + +DV+H + G V++IAM + LQAL+++ +
Sbjct: 116 GLESETPNHVLILTIYNAQYPINVDVIHQICELHGFVRRIAMI-RRTMLQALVEFESAEI 174
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 222
A AK A+ G IY G C L + +++ + + N+ DYT
Sbjct: 175 AKKAKHAMNGADIY-SGCCTLKVEFAKPEHVKVTRNDSDQWDYT 217
Score = 44.3 bits (103), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 8/89 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ V I Q+ GFV +I +T QALV+F E A AK+A++G I
Sbjct: 137 INVDVIHQICELHGFVRRIAMIRRTM-LQALVEFESAEIAKKAKHAMNGADI-------Y 188
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYT 96
G CTL++ ++ + V DYT
Sbjct: 189 SGCCTLKVEFAKPEHVKVTRNDSDQWDYT 217
>gi|74193172|dbj|BAE20599.1| unnamed protein product [Mus musculus]
gi|74193487|dbj|BAE20681.1| unnamed protein product [Mus musculus]
gi|74193495|dbj|BAE20685.1| unnamed protein product [Mus musculus]
Length = 241
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 53/109 (48%), Gaps = 13/109 (11%)
Query: 73 LRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEP------ES 126
+ I YS H +L ++ + N V A+ A + L G + +S
Sbjct: 126 IYIQYSNHKEL-------KTDNTLNQRAQVVLQAVTAVQTANTPLSGTTVSESAVTPAQS 178
Query: 127 NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPD 175
VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D
Sbjct: 179 PVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGD 227
Score = 40.8 bits (94), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 23/37 (62%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAK 51
Q+FS FG V KI TF K FQAL+Q+ D A AK
Sbjct: 199 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAK 235
>gi|145478107|ref|XP_001425076.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124392144|emb|CAK57678.1| unnamed protein product [Paramecium tetraurelia]
Length = 361
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 84/172 (48%), Gaps = 11/172 (6%)
Query: 123 EPESNVLLASIENMQYAVTLD--VLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAV 180
+P + +LL + ++ + TL+ +H F+ FG + KI +F+K +A +++ ++ +A+
Sbjct: 7 DPPNKILLLILNSLPSSFTLNNQFIHQKFNQFGDINKILIFEKGKTTKAFVEFHELNSAI 66
Query: 181 VAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQP 240
AK+ L G C GG +H S ++ +L I V+N R DYT S+ NS + +
Sbjct: 67 QAKKQLNG-CNIQGGKMNIHFSRLKNLNLEI-VDNSRGTDYTQASSNSQNSDSMLNSRTE 124
Query: 241 VPMVGATANQYNGAQFAPPPPEQPMMHQ------PTAAGWGAVPPASQSMPM 286
+ N + Q +P P+ ++ ++ G + Q+MP+
Sbjct: 125 ENIQFDLTNHISSTQ-SPRANSSPIRNEQINRLLESSDGEDDLKIWKQTMPL 175
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 93/239 (38%), Gaps = 67/239 (28%)
Query: 12 FILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPC 71
FI Q F+ FG ++KI FEK +A V+F + +A AK L+G N+
Sbjct: 30 FIHQKFNQFGDINKILIFEKGKTTKAFVEFHELNSAIQAKKQLNGC---------NIQGG 80
Query: 72 TLRITYSAHTDLSVKF-QSHRSRDYT---------------------------------- 96
+ I +S +L+++ + R DYT
Sbjct: 81 KMNIHFSRLKNLNLEIVDNSRGTDYTQASSNSQNSDSMLNSRTEENIQFDLTNHISSTQS 140
Query: 97 ---------NPYLPVAPSAIDASGQLSVG-----LDGKKLEPESNVLLA-------SIEN 135
N + + D L + LD ++ PE LL I N
Sbjct: 141 PRANSSPIRNEQINRLLESSDGEDDLKIWKQTMPLDIEEFHPEIQKLLQQRQSRLLKILN 200
Query: 136 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDG 194
+T +++ VFS FG +++I +++K+ +A I+Y V A++AKE L +D
Sbjct: 201 FDSKITAKMIYNVFSKFGNLEEI-LYEKSSS-RAYIKYQSVNQAIIAKEYLNNIQFFDS 257
>gi|149025820|gb|EDL82063.1| polypyrimidine tract binding protein 2, isoform CRA_c [Rattus
norvegicus]
Length = 243
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 52/107 (48%), Gaps = 13/107 (12%)
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEP------ESNV 128
I YS H +L ++ + N V A+ A + L G + +S V
Sbjct: 128 IQYSNHKEL-------KTDNTLNQRAQVVLQAVTAVQTANTPLSGTTVSESAVTPAQSPV 180
Query: 129 LLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPD 175
L I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D
Sbjct: 181 LRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGD 227
Score = 40.8 bits (94), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 23/37 (62%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAK 51
Q+FS FG V KI TF K FQAL+Q+ D A AK
Sbjct: 199 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAK 235
>gi|324510343|gb|ADY44324.1| Heterogeneous nuclear ribonucleoprotein L [Ascaris suum]
Length = 400
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 64/120 (53%), Gaps = 2/120 (1%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + E S VL+ ++ N+ + ++V+ + + +G V++IAM + G+QAL+++ D+Q
Sbjct: 19 GLETEHASRVLILTVYNVCQPIDINVIFQICAPYGVVKRIAMLHR-FGVQALVEFDDMQM 77
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 238
A AK + G IY G C L + +++ +++ N DYT TP P + Q
Sbjct: 78 AKNAKRGINGADIYHGC-CTLKVEFAKPDHVNVTANTSMQWDYTTGLTPGFIDYPHTIQQ 136
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 8/94 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ + I Q+ + +G V +I + G QALV+F D + A +AK ++G I
Sbjct: 40 IDINVIFQICAPYGVVKRIAMLHRF-GVQALVEFDDMQMAKNAKRGINGADIYH------ 92
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLP 101
G CTL++ ++ ++V + DYT P
Sbjct: 93 -GCCTLKVEFAKPDHVNVTANTSMQWDYTTGLTP 125
>gi|290975622|ref|XP_002670541.1| predicted protein [Naegleria gruberi]
gi|284084101|gb|EFC37797.1| predicted protein [Naegleria gruberi]
Length = 918
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 70/142 (49%), Gaps = 16/142 (11%)
Query: 128 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 187
+ + Y + +D+L +FS FG ++KI +F KN Q+L+Q+ A A + +E
Sbjct: 340 ITFTHCDEYNYPLNVDLLFNLFSKFGTIEKINIFIKNELTQSLVQFKSDTEATEAVKEME 399
Query: 188 GHCIY-DGGFCKLHISYSRHT--DLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMV 244
G +Y + +++I +S+ + +L IK N R+RDY + PM Q+P
Sbjct: 400 GVFVYPEMKLYRMNIQFSKKSREELLIKETNHRNRDYVV--HPM-------RSQKPYDGS 450
Query: 245 GATANQYNGA----QFAPPPPE 262
G++ N +APPP +
Sbjct: 451 GSSMRYNNNTPSNNHYAPPPED 472
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQF-SDTETASSAKNALDGRSIPRYLLPE 66
L V + +FS FG + KI F K Q+LVQF SDTE A+ A ++G ++ PE
Sbjct: 352 LNVDLLFNLFSKFGTIEKINIFIKNELTQSLVQFKSDTE-ATEAVKEMEG----VFVYPE 406
Query: 67 -NMGPCTLRITYSAHTDLSVKFQSHRSRDY 95
+ ++ + + +L +K +HR+RDY
Sbjct: 407 MKLYRMNIQFSKKSREELLIKETNHRNRDY 436
>gi|296489304|tpg|DAA31417.1| TPA: polypyrimidine tract binding protein 2-like [Bos taurus]
Length = 496
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 37/59 (62%)
Query: 125 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAK 183
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 146 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAK 204
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 94/213 (44%), Gaps = 31/213 (14%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLL---------- 64
Q+FS FG V KI TF K FQAL+Q+ D A AK L+ ++ ++L+
Sbjct: 168 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAK--LEKKNDHQWLMAAAEATPKAD 225
Query: 65 -----PENMGPCTLRITYS-AHTDLSVKFQSHRSRDYTNPYLP--VAPSAI-------DA 109
+ R+ Y+ T + +++ S+ +P ++P AI A
Sbjct: 226 FTLRRERFISSSWFRVLYTFRETSPVMNYRNDPSKYSLEKTVPGALSPLAIPNAAAAAAA 285
Query: 110 SGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQA 169
+ VG+ G + +L++++ + VT L +F +G VQ++ + N A
Sbjct: 286 AAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDVQRVKIL-YNKKDSA 342
Query: 170 LIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 202
LIQ D + +A L G +Y G ++ +S
Sbjct: 343 LIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLS 374
>gi|324504331|gb|ADY41870.1| Heterogeneous nuclear ribonucleoprotein L [Ascaris suum]
Length = 536
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 64/120 (53%), Gaps = 2/120 (1%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + E S VL+ ++ N+ + ++V+ + + +G V++IAM + G+QAL+++ D+Q
Sbjct: 153 GLETEHASRVLILTVYNVCQPIDINVIFQICAPYGVVKRIAMLHR-FGVQALVEFDDMQM 211
Query: 179 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 238
A AK + G IY G C L + +++ +++ N DYT TP P + Q
Sbjct: 212 AKNAKRGINGADIYHGC-CTLKVEFAKPDHVNVTANTSMQWDYTTGLTPGFIDYPHTIQQ 270
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 8/94 (8%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPEN 67
+ + I Q+ + +G V +I + G QALV+F D + A +AK ++G I
Sbjct: 174 IDINVIFQICAPYGVVKRIAMLHR-FGVQALVEFDDMQMAKNAKRGINGADIYH------ 226
Query: 68 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLP 101
G CTL++ ++ ++V + DYT P
Sbjct: 227 -GCCTLKVEFAKPDHVNVTANTSMQWDYTTGLTP 259
>gi|344255742|gb|EGW11846.1| Polypyrimidine tract-binding protein 2 [Cricetulus griseus]
Length = 212
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 34/51 (66%)
Query: 125 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPD 175
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D
Sbjct: 146 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGD 196
Score = 40.8 bits (94), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 23/37 (62%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAK 51
Q+FS FG V KI TF K FQAL+Q+ D A AK
Sbjct: 168 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAK 204
>gi|298707512|emb|CBJ30114.1| human PTB (hnRNP) homolog family member (ptb-1) [Ectocarpus
siliculosus]
Length = 921
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 39/61 (63%)
Query: 127 NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEAL 186
NVLL + ++ + VT+ L +FS FG V KI MFDK G QAL+Q +V TA+ A EA
Sbjct: 87 NVLLVRVTDIVHPVTILALQQIFSRFGKVDKIVMFDKGSGSQALVQMANVHTAMSAHEAA 146
Query: 187 E 187
+
Sbjct: 147 D 147
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 36/58 (62%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLP 65
+ ++ + Q+FS FG V KI F+K +G QALVQ ++ TA SA A D +S P +P
Sbjct: 100 VTILALQQIFSRFGKVDKIVMFDKGSGSQALVQMANVHTAMSAHEAADMQSGPYGSIP 157
>gi|158519869|ref|NP_001103551.1| polypyrimidine tract-binding protein 2 [Bos taurus]
gi|158455056|gb|AAI22581.1| PTBP2 protein [Bos taurus]
Length = 255
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 34/51 (66%)
Query: 125 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPD 175
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D
Sbjct: 177 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGD 227
Score = 40.8 bits (94), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 23/37 (62%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAK 51
Q+FS FG V KI TF K FQAL+Q+ D A AK
Sbjct: 199 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAK 235
>gi|148700268|gb|EDL32215.1| mCG50057 [Mus musculus]
Length = 253
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 43/70 (61%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 178
G + +S L +EN+ Y VTLD++H +FS FG V KI F KN QAL+QY D +
Sbjct: 184 GMAMAGQSPALRIIVENLFYPVTLDMVHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 243
Query: 179 AVVAKEALEG 188
A AK +L+G
Sbjct: 244 AQHAKLSLDG 253
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 29/42 (69%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDG 56
Q+FS FG V KI TF K FQAL+Q++D +A AK +LDG
Sbjct: 212 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDG 253
>gi|256076159|ref|XP_002574381.1| polypyrimidine tract binding protein [Schistosoma mansoni]
Length = 639
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 95/203 (46%), Gaps = 6/203 (2%)
Query: 83 LSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN-MQYAVT 141
L +F +H + + + + +A+ + L G + + VL I+N M +
Sbjct: 157 LIFQFSTHSHLELISENDAIVNAIKNANRVVQQDLPGAQTGVPNTVLHVVIDNIMGQQIN 216
Query: 142 LDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHI 201
+L+ +F FG + ++ +F +N + L+++ + A VA L G IY G C L +
Sbjct: 217 HVILYKIFHRFGTILRVLIFLRNNQYRCLLEFQNHIQAFVAMLLLNGQNIYTGC-CSLQV 275
Query: 202 SYSRHTD-LSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQYNGAQFAPPP 260
+ + L ++ ND+ RDYT+ +P+ + + + L P + +T N + P
Sbjct: 276 EFWKARGPLEVRRENDKCRDYTI--SPLTDDELNSLQALPGGVTASTNNSTINSISQPSI 333
Query: 261 PEQPMMHQPTAAGWGAVPPASQS 283
+ + PTAA + AVP A+ S
Sbjct: 334 GQNIPLGNPTAA-FTAVPQAAAS 355
>gi|256076161|ref|XP_002574382.1| polypyrimidine tract binding protein [Schistosoma mansoni]
Length = 463
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 95/203 (46%), Gaps = 6/203 (2%)
Query: 83 LSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN-MQYAVT 141
L +F +H + + + + +A+ + L G + + VL I+N M +
Sbjct: 157 LIFQFSTHSHLELISENDAIVNAIKNANRVVQQDLPGAQTGVPNTVLHVVIDNIMGQQIN 216
Query: 142 LDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHI 201
+L+ +F FG + ++ +F +N + L+++ + A VA L G IY G C L +
Sbjct: 217 HVILYKIFHRFGTILRVLIFLRNNQYRCLLEFQNHIQAFVAMLLLNGQNIYTG-CCSLQV 275
Query: 202 SYSRHTD-LSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQYNGAQFAPPP 260
+ + L ++ ND+ RDYT+ +P+ + + + L P + +T N + P
Sbjct: 276 EFWKARGPLEVRRENDKCRDYTI--SPLTDDELNSLQALPGGVTASTNNSTINSISQPSI 333
Query: 261 PEQPMMHQPTAAGWGAVPPASQS 283
+ + PTAA + AVP A+ S
Sbjct: 334 GQNIPLGNPTAA-FTAVPQAAAS 355
>gi|350644875|emb|CCD60411.1| polypyrimidine tract binding protein, putative [Schistosoma
mansoni]
Length = 592
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 95/203 (46%), Gaps = 6/203 (2%)
Query: 83 LSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN-MQYAVT 141
L +F +H + + + + +A+ + L G + + VL I+N M +
Sbjct: 121 LIFQFSTHSHLELISENDAIVNAIKNANRVVQQDLPGAQTGVPNTVLHVVIDNIMGQQIN 180
Query: 142 LDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHI 201
+L+ +F FG + ++ +F +N + L+++ + A VA L G IY G C L +
Sbjct: 181 HVILYKIFHRFGTILRVLIFLRNNQYRCLLEFQNHIQAFVAMLLLNGQNIYTGC-CSLQV 239
Query: 202 SYSRHTD-LSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQYNGAQFAPPP 260
+ + L ++ ND+ RDYT+ +P+ + + + L P + +T N + P
Sbjct: 240 EFWKARGPLEVRRENDKCRDYTI--SPLTDDELNSLQALPGGVTASTNNSTINSISQPSI 297
Query: 261 PEQPMMHQPTAAGWGAVPPASQS 283
+ + PTAA + AVP A+ S
Sbjct: 298 GQNIPLGNPTAA-FTAVPQAAAS 319
>gi|350644874|emb|CCD60410.1| polypyrimidine tract binding protein, putative [Schistosoma
mansoni]
Length = 427
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 95/203 (46%), Gaps = 6/203 (2%)
Query: 83 LSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN-MQYAVT 141
L +F +H + + + + +A+ + L G + + VL I+N M +
Sbjct: 121 LIFQFSTHSHLELISENDAIVNAIKNANRVVQQDLPGAQTGVPNTVLHVVIDNIMGQQIN 180
Query: 142 LDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHI 201
+L+ +F FG + ++ +F +N + L+++ + A VA L G IY G C L +
Sbjct: 181 HVILYKIFHRFGTILRVLIFLRNNQYRCLLEFQNHIQAFVAMLLLNGQNIYTG-CCSLQV 239
Query: 202 SYSRHTD-LSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQYNGAQFAPPP 260
+ + L ++ ND+ RDYT+ +P+ + + + L P + +T N + P
Sbjct: 240 EFWKARGPLEVRRENDKCRDYTI--SPLTDDELNSLQALPGGVTASTNNSTINSISQPSI 297
Query: 261 PEQPMMHQPTAAGWGAVPPASQS 283
+ + PTAA + AVP A+ S
Sbjct: 298 GQNIPLGNPTAA-FTAVPQAAAS 319
>gi|226487296|emb|CAX75513.1| Polypyrimidine tract-binding protein 1 [Schistosoma japonicum]
Length = 571
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 93/203 (45%), Gaps = 6/203 (2%)
Query: 83 LSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN-MQYAVT 141
L +F +H + + + + +A+ + L G + + VL I+N M +
Sbjct: 89 LIFQFSTHSHLELISENDAIVNAIKNANRVVQQDLPGAQTGVPNTVLHVVIDNIMGQQIN 148
Query: 142 LDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHI 201
+L+ +F FG + ++ +F +N + L+++ D A VA L G IY G C L +
Sbjct: 149 HVILYKIFHRFGIILRVLIFLRNNQYRCLLEFQDHIQAFVAMLLLNGQNIYTGC-CSLQV 207
Query: 202 SYSRHTD-LSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQYNGAQFAPPP 260
+ + L ++ ND+ RDYT+ +P+ ++ + L P + +T N P
Sbjct: 208 EFWKARGPLEVRRENDKCRDYTV--SPLTEAELNSLQALPSGVTASTNNSTINTIPQPTI 265
Query: 261 PEQPMMHQPTAAGWGAVPPASQS 283
+ + PT A + A+P AS S
Sbjct: 266 GQNISLGNPTTA-FTAIPQASAS 287
Score = 41.2 bits (95), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 45/87 (51%), Gaps = 8/87 (9%)
Query: 11 IFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGP 70
+ + ++F FG + ++ F + ++ L++F D A A L+G++I G
Sbjct: 150 VILYKIFHRFGIILRVLIFLRNNQYRCLLEFQDHIQAFVAMLLLNGQNIY-------TGC 202
Query: 71 CTLRITY-SAHTDLSVKFQSHRSRDYT 96
C+L++ + A L V+ ++ + RDYT
Sbjct: 203 CSLQVEFWKARGPLEVRRENDKCRDYT 229
>gi|403370184|gb|EJY84954.1| Polypyrimidine tract binding protein, putative [Oxytricha
trifallax]
Length = 734
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 54/102 (52%), Gaps = 6/102 (5%)
Query: 125 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 184
+S VLL SI N++Y V DVL +F +G Q+I +F + G QAL+++ + A K
Sbjct: 418 DSKVLLVSITNIKYPVNADVLFTIFQKYGDPQRIVIFPRQQGEQALVEFQTFEQAKKVKL 477
Query: 185 ALEGHCIYDGGFCK----LHISYSRHTDLSIKVNNDRSRDYT 222
L+G +Y G + + I +S L I ++RD+T
Sbjct: 478 LLDGQGMY--GVSQPANVMKIQFSELQKLEINTQTLKARDFT 517
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 5/108 (4%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCT 72
+ +F +G +I F + G QALV+F E A K LDG+ + P N+
Sbjct: 438 LFTIFQKYGDPQRIVIFPRQQGEQALVEFQTFEQAKKVKLLLDGQGMYGVSQPANV---- 493
Query: 73 LRITYSAHTDLSVKFQSHRSRDYTNPYL-PVAPSAIDASGQLSVGLDG 119
++I +S L + Q+ ++RD+T + + ID G LS+ D
Sbjct: 494 MKIQFSELQKLEINTQTLKARDFTKQTVGSFVQNQIDKQGDLSINKDD 541
>gi|403358967|gb|EJY79143.1| Polypyrimidine tract binding protein, putative [Oxytricha
trifallax]
Length = 479
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 54/102 (52%), Gaps = 6/102 (5%)
Query: 125 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 184
+S VLL SI N++Y V DVL +F +G Q+I +F + G QAL+++ + A K
Sbjct: 163 DSKVLLVSITNIKYPVNADVLFTIFQKYGDPQRIVIFPRQQGEQALVEFQTFEQAKKVKL 222
Query: 185 ALEGHCIYDGGFCK----LHISYSRHTDLSIKVNNDRSRDYT 222
L+G +Y G + + I +S L I ++RD+T
Sbjct: 223 LLDGQGMY--GVSQPANVMKIQFSELQKLEINTQTLKARDFT 262
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 5/107 (4%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCT 72
+ +F +G +I F + G QALV+F E A K LDG+ + P N+
Sbjct: 183 LFTIFQKYGDPQRIVIFPRQQGEQALVEFQTFEQAKKVKLLLDGQGMYGVSQPANV---- 238
Query: 73 LRITYSAHTDLSVKFQSHRSRDYTNPYL-PVAPSAIDASGQLSVGLD 118
++I +S L + Q+ ++RD+T + + ID G LS+ D
Sbjct: 239 MKIQFSELQKLEINTQTLKARDFTKQTVGSFVQNQIDKQGDLSINKD 285
>gi|226487300|emb|CAX75515.1| Polypyrimidine tract-binding protein 1 [Schistosoma japonicum]
gi|226487302|emb|CAX75516.1| Polypyrimidine tract-binding protein 1 [Schistosoma japonicum]
Length = 603
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 93/203 (45%), Gaps = 6/203 (2%)
Query: 83 LSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN-MQYAVT 141
L +F +H + + + + +A+ + L G + + VL I+N M +
Sbjct: 121 LIFQFSTHSHLELISENDAIVNAIKNANRVVQQDLPGAQTGVPNTVLHVVIDNIMGQQIN 180
Query: 142 LDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHI 201
+L+ +F FG + ++ +F +N + L+++ D A VA L G IY G C L +
Sbjct: 181 HVILYKIFHRFGIILRVLIFLRNNQYRCLLEFQDHIQAFVAMLLLNGQNIYTGC-CSLQV 239
Query: 202 SYSRHTD-LSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQYNGAQFAPPP 260
+ + L ++ ND+ RDYT+ +P+ ++ + L P + +T N P
Sbjct: 240 EFWKARGPLEVRRENDKCRDYTV--SPLTEAELNSLQALPSGVSASTNNSTINTIPQPTI 297
Query: 261 PEQPMMHQPTAAGWGAVPPASQS 283
+ + PT A + A+P AS S
Sbjct: 298 GQNISLGNPTTA-FTAIPQASAS 319
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 45/87 (51%), Gaps = 8/87 (9%)
Query: 11 IFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGP 70
+ + ++F FG + ++ F + ++ L++F D A A L+G++I G
Sbjct: 182 VILYKIFHRFGIILRVLIFLRNNQYRCLLEFQDHIQAFVAMLLLNGQNIY-------TGC 234
Query: 71 CTLRITY-SAHTDLSVKFQSHRSRDYT 96
C+L++ + A L V+ ++ + RDYT
Sbjct: 235 CSLQVEFWKARGPLEVRRENDKCRDYT 261
>gi|82794317|ref|XP_728389.1| neural polypyrimidine tract binding protein [Plasmodium yoelii
yoelii 17XNL]
gi|23484718|gb|EAA19954.1| neural polypyrimidine tract binding protein [Plasmodium yoelii
yoelii]
Length = 387
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 54/97 (55%), Gaps = 5/97 (5%)
Query: 136 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGL-QALIQYPDVQTAVVAKEALEGHCIYDG 194
MQY V +++++ +FS G V+KI K + QAL+Q ++ A A + L IYDG
Sbjct: 1 MQYPVDIELIYYLFSKCGIVEKIITISKKTSIFQALVQLESIEVAKEAIKTLHNRNIYDG 60
Query: 195 GFCK-LHISYSRHTDLSIKVNNDRSRDYTLPSTPMVN 230
C L I YS +L IK NN ++ DYT+ S P N
Sbjct: 61 --CNTLQIQYSFLKELIIKNNNSQAWDYTI-SNPQKN 94
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 104/234 (44%), Gaps = 41/234 (17%)
Query: 13 ILQVFSAFGFVHKITTF-EKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPC 71
I +FS G V KI T +KT+ FQALVQ E A A L R+I G
Sbjct: 10 IYYLFSKCGIVEKIITISKKTSIFQALVQLESIEVAKEAIKTLHNRNIYD-------GCN 62
Query: 72 TLRITYSAHTDLSVKFQSHRSRDYT--NP--------------YLPVAPSAIDASGQLS- 114
TL+I YS +L +K + ++ DYT NP LP P I +
Sbjct: 63 TLQIQYSFLKELIIKNNNSQAWDYTISNPQKNKNNFSFQMSHGVLPTPPRNIKETELYKL 122
Query: 115 VGLDGKKLEPESN------VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQ 168
+G K ++ E+ VL+ +Y+ ++ L +FS +G V +I + +
Sbjct: 123 LGRKFKIVDFETKNASKTPVLICYNIPKEYS-DVNKLFNLFSIYGYVSRIKILREKPD-S 180
Query: 169 ALIQYPDVQTAVVAKEALEGHCIYDGGFCK--LHISYSRHTDLSIKVNNDRSRD 220
ALIQY + + +A+E C+ C+ L + +S+ D+ I D+SRD
Sbjct: 181 ALIQYSNYLFSSMAQE-----CLQHAKICQNILELHFSKIYDIKISY-QDKSRD 228
>gi|449687307|ref|XP_002155274.2| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Hydra
magnipapillata]
Length = 759
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 94/211 (44%), Gaps = 38/211 (18%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCT 72
++Q+ FG + +T K QALV++ + E+A + + P +L M
Sbjct: 158 LVQIMRPFGSIRALTLMPKLR--QALVEYEELESAIAC--VTYAQIQPVLILGRQM---- 209
Query: 73 LRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLAS 132
+ YS T+++ RD++N SVG + +N+LL +
Sbjct: 210 -YVNYSKSTEIN--------RDFSN-------------SNASVG------QAPTNILLFT 241
Query: 133 IENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 192
I N + V ++ + + VQ+I +F KN GLQAL+++ V A ++AL G C
Sbjct: 242 IINAIHPVNVETVKKICLQHAEVQRIVIFHKN-GLQALVEFLSVDDAQRIQQALNG-CDI 299
Query: 193 DGGFCKLHISYSRHTDLSIKVNNDRSRDYTL 223
G C L I +S+ L++ N + D +
Sbjct: 300 FAGCCTLKIDFSKTGRLNVHANTTETYDIEI 330
>gi|145496290|ref|XP_001434136.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124401259|emb|CAK66739.1| unnamed protein product [Paramecium tetraurelia]
Length = 358
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 61/100 (61%), Gaps = 5/100 (5%)
Query: 138 YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFC 197
+ +T + LH F+ FG ++KI +F++ +A ++Y ++++A+ A++ L G I G
Sbjct: 24 FPLTNEFLHKKFNEFGDIKKILIFERGKTNKAFVEYHNLKSAISARKQLNGLNIQGG--- 80
Query: 198 KLHISYSRHTDLSIK-VNNDRSRDYTLPSTPMVNSQPSIL 236
K+ I YSR +L+++ V+N R DYT S+ NS SIL
Sbjct: 81 KMIIHYSRLKNLNLEIVDNSRGTDYTQASSNSQNS-DSIL 119
>gi|146197802|dbj|BAF57617.1| hnRNP L protein [Dugesia japonica]
Length = 537
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Query: 136 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGG--LQALIQYPDVQTAVVAKEALEGHCIYD 193
+Y +T+D++ + FG + KI + KN ++ L+++ + A AKEAL G IY
Sbjct: 2 FKYPITVDIIKQICLKFGKLLKIFIGKKNQDNVVECLVEFEKISEAKAAKEALHGEDIY- 60
Query: 194 GGFCKLHISYSRHTDLSIKVNNDRSRDYT 222
G C L + YS+ +++ + N+D S D++
Sbjct: 61 SGCCSLDVKYSKMSNVPVFKNDDESWDFS 89
>gi|301777342|ref|XP_002924098.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like, partial
[Ailuropoda melanoleuca]
Length = 281
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 54/99 (54%), Gaps = 14/99 (14%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VLL SI+N Y +T+DVL+ V + G VQ++ MF+ V A AK A
Sbjct: 192 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQQL-MFE------------SVLCAQKAKAA 238
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP 224
L G IY G C L I Y+R T L++ N++ S DYT P
Sbjct: 239 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYTKP 276
>gi|375073695|gb|AFA34406.1| polypirimidine tract binding 2 protein, partial [Ostrea edulis]
Length = 142
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 40/62 (64%)
Query: 133 IENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 192
+E++ Y V ++VL+ +FS FG V K+ +F KN QALIQ D A AK +L+G IY
Sbjct: 79 VEHLVYPVGIEVLYQIFSKFGKVLKMIIFTKNNSFQALIQMSDPVAANAAKLSLDGQNIY 138
Query: 193 DG 194
+G
Sbjct: 139 NG 140
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSI 59
+ Q+FS FG V K+ F K FQAL+Q SD A++AK +LDG++I
Sbjct: 91 LYQIFSKFGKVLKMIIFTKNNSFQALIQMSDPVAANAAKLSLDGQNI 137
>gi|195151588|ref|XP_002016721.1| GL11732 [Drosophila persimilis]
gi|194110568|gb|EDW32611.1| GL11732 [Drosophila persimilis]
Length = 102
Score = 56.6 bits (135), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/90 (37%), Positives = 52/90 (57%), Gaps = 3/90 (3%)
Query: 143 DVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 202
DVLH + G V +I +F KNG +QA++++ ++ A A+E L G IY G C L I
Sbjct: 1 DVLHKICHPHGQVLRIVIFKKNG-VQAMVEFDNLDAATRARENLNGADIY-AGCCTLKID 58
Query: 203 YSRHTDLSIKVNN-DRSRDYTLPSTPMVNS 231
Y++ L++ N D S DYTL + ++ S
Sbjct: 59 YAKPEKLNVYKNEPDTSWDYTLSTGEILPS 88
Score = 42.4 bits (98), Expect = 0.32, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 9/87 (10%)
Query: 21 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 80
G V +I F+K G QA+V+F + + A+ A+ L+G I G CTL+I Y+
Sbjct: 11 GQVLRIVIFKKN-GVQAMVEFDNLDAATRARENLNGADI-------YAGCCTLKIDYAKP 62
Query: 81 TDLSV-KFQSHRSRDYTNPYLPVAPSA 106
L+V K + S DYT + PSA
Sbjct: 63 EKLNVYKNEPDTSWDYTLSTGEILPSA 89
>gi|194755561|ref|XP_001960052.1| GF13175 [Drosophila ananassae]
gi|190621350|gb|EDV36874.1| GF13175 [Drosophila ananassae]
Length = 97
Score = 56.6 bits (135), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/90 (37%), Positives = 52/90 (57%), Gaps = 3/90 (3%)
Query: 143 DVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 202
DVLH + G V +I +F KNG +QA++++ ++ A A+E L G IY G C L I
Sbjct: 1 DVLHKICHPHGQVLRIVIFKKNG-VQAMVEFDNLDAATRARENLNGADIY-AGCCTLKID 58
Query: 203 YSRHTDLSIKVNN-DRSRDYTLPSTPMVNS 231
Y++ L++ N D S DYTL + ++ S
Sbjct: 59 YAKPEKLNVYKNEPDTSWDYTLSTGEILPS 88
Score = 42.4 bits (98), Expect = 0.32, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 9/87 (10%)
Query: 21 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 80
G V +I F+K G QA+V+F + + A+ A+ L+G I G CTL+I Y+
Sbjct: 11 GQVLRIVIFKKN-GVQAMVEFDNLDAATRARENLNGADI-------YAGCCTLKIDYAKP 62
Query: 81 TDLSV-KFQSHRSRDYTNPYLPVAPSA 106
L+V K + S DYT + PSA
Sbjct: 63 EKLNVYKNEPDTSWDYTLSTGEILPSA 89
>gi|47218405|emb|CAG12676.1| unnamed protein product [Tetraodon nigroviridis]
Length = 582
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 83/207 (40%), Gaps = 52/207 (25%)
Query: 75 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIE 134
I YS H +L + R++ A SA+ + G S + S VL I+
Sbjct: 140 IQYSNHKELKTDAGNQRTQAVLQ-----AVSAVQSGGSPSSDVQEALAAASSPVLRIIID 194
Query: 135 NMQYAVTLDVLHMVF-------SAFGPVQKIAMFDKNGGL-------------------- 167
NM Y VTLDVL V S V K +F +
Sbjct: 195 NMFYPVTLDVLQQVAFPHPLPPSVGRSVSKSGLFLGSSDFLQVRHSHEDNHLHQEQSVPG 254
Query: 168 QALIQYPDVQTA----------VVAK---------EALEGHCIYDGGFCKLHISYSRHTD 208
+ +Q P + A V+A +AL+G IY+ C L I +S+ +
Sbjct: 255 SSAVQRPRQRAAGQTGKALPPGVLAACSGLTFIHLQALDGQNIYNS-CCTLRIDFSKLVN 313
Query: 209 LSIKVNNDRSRDYTLPSTPMVNSQPSI 235
L++K NND+SRDYT P P + QPS+
Sbjct: 314 LNVKYNNDKSRDYTRPELPAGDGQPSL 340
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 81/190 (42%), Gaps = 43/190 (22%)
Query: 53 ALDGRSIPRYLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVA-------PS 105
ALDG++I CTLRI +S +L+VK+ + +SRDYT P LP P+
Sbjct: 291 ALDGQNIYNSC-------CTLRIDFSKLVNLNVKYNNDKSRDYTRPELPAGDGQPSLDPA 343
Query: 106 AIDASGQLSVGLDGK---KLEPES---------------------NVLLASIENMQYAVT 141
A + S L GK L P S VLL S N + VT
Sbjct: 344 VAAAFSKDSNSLLGKIPGALTPLSAAAAAAAAAGRVALAGQAGSGGVLLVSNLNEEM-VT 402
Query: 142 LDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHI 201
L +F +G VQ++ + N ALIQ D A +A L G +Y + +
Sbjct: 403 PQSLFTLFGVYGDVQRVKIL-YNKKDSALIQMSDANQAQLAMSHLNGQKMYGK---IIRV 458
Query: 202 SYSRHTDLSI 211
+ S+H +++
Sbjct: 459 TLSKHQSVAL 468
>gi|145478423|ref|XP_001425234.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124392303|emb|CAK57836.1| unnamed protein product [Paramecium tetraurelia]
Length = 358
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 61/100 (61%), Gaps = 5/100 (5%)
Query: 138 YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFC 197
+ +T + LH F+ FG ++KI +F++ +A +++ ++++A+ A++ L G I G
Sbjct: 24 FPLTNEYLHKKFNEFGDLKKILIFERGKTNKAFVEFHNLKSAIAARKQLNGLNIQGG--- 80
Query: 198 KLHISYSRHTDLSIK-VNNDRSRDYTLPSTPMVNSQPSIL 236
K+ I YSR +L+++ V+N R DYT S+ NS SIL
Sbjct: 81 KMIIHYSRLKNLNLEIVDNSRGTDYTQASSNSQNS-DSIL 119
>gi|387219209|gb|AFJ69313.1| polypyrimidine tract binding protein [Nannochloropsis gaditana
CCMP526]
Length = 324
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 160 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSR 219
MF+K G QAL+QYPDV +A A E + +Y + + YS H D+ ++ N DR+
Sbjct: 1 MFNKGAGNQALVQYPDVASAQAAFEQADHRNMYTDSNL-IRVGYSTHHDIKVRANTDRTW 59
Query: 220 DYTLPST 226
DYT T
Sbjct: 60 DYTKKKT 66
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 7/69 (10%)
Query: 29 FEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAHTDLSVKFQ 88
F K AG QALVQ+ D +A +A D R++ N+ +R+ YS H D+ V+
Sbjct: 2 FNKGAGNQALVQYPDVASAQAAFEQADHRNM---YTDSNL----IRVGYSTHHDIKVRAN 54
Query: 89 SHRSRDYTN 97
+ R+ DYT
Sbjct: 55 TDRTWDYTK 63
>gi|90075792|dbj|BAE87576.1| unnamed protein product [Macaca fascicularis]
Length = 226
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 32/48 (66%)
Query: 125 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQ 172
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+Q
Sbjct: 177 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQ 224
>gi|345330029|ref|XP_003431460.1| PREDICTED: regulator of differentiation 1-like [Ornithorhynchus
anatinus]
Length = 670
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 39/66 (59%)
Query: 118 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 177
D L +S+VL +EN+ Y VTL+VL+ +F FG V KI F KN QAL+Q+ D
Sbjct: 170 DSGLLPGQSSVLRIIVENLFYPVTLEVLYQIFFKFGTVLKIITFTKNNQFQALLQFADPM 229
Query: 178 TAVVAK 183
A AK
Sbjct: 230 NAHYAK 235
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Query: 8 LKVIFILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAK 51
L+V++ Q+F FG V KI TF K FQAL+QF+D A AK
Sbjct: 194 LEVLY--QIFFKFGTVLKIITFTKNNQFQALLQFADPMNAHYAK 235
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 80/198 (40%), Gaps = 22/198 (11%)
Query: 11 IFILQVFSAFGFVHKITT-FEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMG 69
+FIL F +G VH++ F K ALVQ +D A A N L G + +
Sbjct: 493 LFIL--FGVYGDVHRVKIMFNKKEN--ALVQMADANQAQLAMNHLSG---------QRLY 539
Query: 70 PCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVL 129
LR T S H + + + + T Y G + + + P S L
Sbjct: 540 GKVLRATLSRHQSVQLPREGQEDQGLTKDYSNSPLHRFKKPGSKNF----QNIFPPSATL 595
Query: 130 LASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGH 189
+ N+ +VT+D L +F+ G K F + ALIQ V+ A+ A L H
Sbjct: 596 --HLSNIPPSVTVDDLKNLFADAGCTVKAFKFFQKDRKMALIQLGSVEEAIQALIELHNH 653
Query: 190 CIYDGGFCKLHISYSRHT 207
+ G L +S+S+ T
Sbjct: 654 DL--GENHHLRVSFSKST 669
>gi|156368308|ref|XP_001627637.1| predicted protein [Nematostella vectensis]
gi|156214552|gb|EDO35537.1| predicted protein [Nematostella vectensis]
Length = 203
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 53/98 (54%), Gaps = 10/98 (10%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
SN+LL +I N + + + +LH + S G V +I +F KN GLQAL +A A
Sbjct: 102 SNILLLTIINPLHPINVKILHKICSPSGKVLRIVIFHKN-GLQAL-------SAERALAV 153
Query: 186 LEGHCIYDGGFCKLHISYSRHT-DLSIKVNNDRSRDYT 222
L G IY G C L I YS+ L++ N+D + DYT
Sbjct: 154 LNGQDIY-AGCCTLKIDYSKKAKKLNVFKNDDETWDYT 190
>gi|308502740|ref|XP_003113554.1| hypothetical protein CRE_26483 [Caenorhabditis remanei]
gi|308263513|gb|EFP07466.1| hypothetical protein CRE_26483 [Caenorhabditis remanei]
Length = 602
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 17/117 (14%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
+ VL+ ++ N QY V DV++ + +A G V ++A+ K +QAL+++ ++ A AK A
Sbjct: 122 NKVLVVTVLNAQYPVDADVIYQISNAQGRVLRVAVMHKPTIVQALVEFESMEIAKAAKHA 181
Query: 186 LEGHCIYDGGFCKLHISYSRHTDL-------SIKVNNDR---------SRDYTLPST 226
+ G IY G C L + +++ L I+ DR RD+T+P
Sbjct: 182 MNGADIY-SGCCTLKVEFAKVCGLFFFLNHHCIRFQPDRVRVTRQDKDQRDFTIPEN 237
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 14/88 (15%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCT 72
I Q+ +A G V ++ K QALV+F E A +AK+A++G I G CT
Sbjct: 141 IYQISNAQGRVLRVAVMHKPTIVQALVEFESMEIAKAAKHAMNGADI-------YSGCCT 193
Query: 73 LRITYSAHTDL-------SVKFQSHRSR 93
L++ ++ L ++FQ R R
Sbjct: 194 LKVEFAKVCGLFFFLNHHCIRFQPDRVR 221
>gi|260784453|ref|XP_002587281.1| hypothetical protein BRAFLDRAFT_237696 [Branchiostoma floridae]
gi|229272423|gb|EEN43292.1| hypothetical protein BRAFLDRAFT_237696 [Branchiostoma floridae]
Length = 304
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 184 EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
++L+G IY+ C L I YS+ L++K NND+SRDYT P P + QPS+
Sbjct: 4 QSLDGQNIYNA-CCTLRIDYSKLETLNVKYNNDKSRDYTRPELPAGDGQPSL 54
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 81/197 (41%), Gaps = 51/197 (25%)
Query: 53 ALDGRSIPRYLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVA---PSAIDA 109
+LDG++I CTLRI YS L+VK+ + +SRDYT P LP PS A
Sbjct: 5 SLDGQNIYN-------ACCTLRIDYSKLETLNVKYNNDKSRDYTRPELPAGDGQPSLEQA 57
Query: 110 SG---------QLSV-----GLDGK--------------------KLEPESNVLLASIEN 135
G LS+ GL G L+ +VLL S N
Sbjct: 58 MGLGTFDPGPPLLSLPSVPGGLTGSIPLAGTIPNLSAASAAARLAGLQQAGSVLLVSNLN 117
Query: 136 MQYAVTLDVLHMVFSAFGPVQKIA-MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDG 194
+ VT D L +F +G V ++ +F K ALIQ + A A + L ++
Sbjct: 118 TEM-VTPDALFTLFGVYGDVHRVKILFAKKD--NALIQMAEPHQANTAMQHLNNLRVWGK 174
Query: 195 GFCKLHISYSRHTDLSI 211
+ ++ S+H + +
Sbjct: 175 ---NIRVTLSKHNQVQL 188
>gi|350034148|dbj|GAA34297.1| heterogeneous nuclear ribonucleoprotein L [Clonorchis sinensis]
Length = 735
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 57/113 (50%), Gaps = 3/113 (2%)
Query: 112 QLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKN--GGLQA 169
Q+ G E ++ +LL I Y +T+DV+ + G V +I + KN ++A
Sbjct: 130 QIDTGRPRPPSEEQTKILLLDITAADYPITVDVIRSICQPHGKVLRIFIGKKNIDRSVEA 189
Query: 170 LIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 222
L++ + A KE ++G IY G C L ++YS+ + + + N+ S D++
Sbjct: 190 LVELDTSEDARKVKEQIDGADIY-YGCCTLKVTYSKISRVHVTKNDSESWDFS 241
>gi|149025818|gb|EDL82061.1| polypyrimidine tract binding protein 2, isoform CRA_a [Rattus
norvegicus]
Length = 322
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 184 EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 235
+AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 27 QALDGQNIYNA-CCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 77
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 83/194 (42%), Gaps = 46/194 (23%)
Query: 44 TETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVA 103
++T S ALDG++I CTLRI +S +L+VK+ + +SRDYT P LP
Sbjct: 19 SDTFYSLLQALDGQNIYN-------ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSG 71
Query: 104 PS------AIDAS-----------GQLS------------------VGLDGKKLEPESNV 128
AI A+ G LS VG+ G + +
Sbjct: 72 DGQPALDPAIAAAFAKETSLLAVPGALSPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVL 131
Query: 129 LLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEG 188
L++++ + VT L +F +G VQ++ + N ALIQ D + +A L G
Sbjct: 132 LVSNLN--EEMVTPQSLFTLFGVYGDVQRVKIL-YNKKDSALIQMADGNQSQLAMNHLNG 188
Query: 189 HCIYDGGFCKLHIS 202
+Y G ++ +S
Sbjct: 189 QKMY-GKIIRVTLS 201
>gi|123474487|ref|XP_001320426.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121903231|gb|EAY08203.1| conserved hypothetical protein [Trichomonas vaginalis G3]
Length = 413
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
S V+ I +Q ++ + ++ S +G V+KI F+KNG AL+Q DV+ A +A
Sbjct: 105 SRVICLQILKLQISLGIYDIYDECSNYGTVEKIICFEKNGKF-ALVQMHDVKEAALALAN 163
Query: 186 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP 224
L Y F ++ I YS + D+ I+ NN +S D+T P
Sbjct: 164 LSNSSRYLPNF-QIKIQYSHNQDIIIQFNNAKSFDFTHP 201
>gi|307189437|gb|EFN73847.1| Polypyrimidine tract-binding protein 2 [Camponotus floridanus]
Length = 352
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 35/52 (67%), Gaps = 3/52 (5%)
Query: 71 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKL 122
CTLRI YS +L+VK+ + +SRDYTNP LP + +DA+ S+ L G+ L
Sbjct: 21 CTLRIDYSKMQNLNVKYNNDKSRDYTNPNLPTGDANLDAA---SLALGGELL 69
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 176 VQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 227
++ A ++L+G +Y+ C L I YS+ +L++K NND+SRDYT P+ P
Sbjct: 1 MKNARFLAQSLDGQNVYNS-CCTLRIDYSKMQNLNVKYNNDKSRDYTNPNLP 51
>gi|358256069|dbj|GAA57625.1| heterogeneous nuclear ribonucleoprotein L [Clonorchis sinensis]
Length = 739
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 92/215 (42%), Gaps = 34/215 (15%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCT 72
++ +F FG V G ALV+F + + + + + P ++GP
Sbjct: 63 LISIFRQFGEVKNAKVV--CNGKAALVEFCEISSPTRLVHMAK-------INPFHVGPNR 113
Query: 73 LRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLAS 132
+R+ +S+ T + F S R + LP SG E + +L
Sbjct: 114 VRLEFSSET---IPFSSSRQPEPKGTLLP--------SG-----------EEATCILHLD 151
Query: 133 IENMQYAVTLDVLHMVFSAFGPVQKIAMFDKN--GGLQALIQYPDVQTAVVAKEALEGHC 190
+ Y +T+DV+ + G + ++ + KN L+ L+++ + A AKE L+G
Sbjct: 152 VAAADYPITVDVIRSICEPHGKLVRVFIGKKNVDRSLEVLVEFESPKDAAKAKEHLDGAD 211
Query: 191 IYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 225
IY G C L ++S+ + + N+ S D++ P+
Sbjct: 212 IY-SGCCSLTATFSKVQKVHVTKNDSESWDFSGPN 245
>gi|145536093|ref|XP_001453774.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124421507|emb|CAK86377.1| unnamed protein product [Paramecium tetraurelia]
Length = 386
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 73/154 (47%), Gaps = 24/154 (15%)
Query: 123 EPESNVLLASIENM--QYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAV 180
+P S +LL I + + +T D L F +G V+KI +F++ +A ++Y +V+ A+
Sbjct: 5 DPPSKILLLIITYLPQSFPLTNDFLFETFKQYGEVKKILIFERGKTNKAFVEYNEVKHAI 64
Query: 181 VAKEALEGHCIY-DGGFCKLHISYSRHTDLSIKVNNDRSRDY------------------ 221
A+ + G + GG +H S + DL + V++ R +Y
Sbjct: 65 SARRNMIGKSLTPQGGRLLIHYSRLKQLDLEV-VDHTRGTEYCSDDEETQPEQKYPLKSM 123
Query: 222 TLPSTPMVNSQPSILGQQPVPMVGATANQYNGAQ 255
TLP++ ++ P ++ Q + + NQ+ GAQ
Sbjct: 124 TLPNSIQIS--PPLIKPQSIEQISNNGNQFKGAQ 155
>gi|322798025|gb|EFZ19869.1| hypothetical protein SINV_08848 [Solenopsis invicta]
Length = 112
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
++VLL +I N Y +T++VLH + + G VQ+I +F KN G+QA++++ V++A+ AKE
Sbjct: 54 NHVLLYTIMNPIYPITVEVLHTISAPSGQVQRIVIFKKN-GVQAMVKFDTVKSAIRAKET 112
>gi|256077460|ref|XP_002575022.1| polypyrimidine tract binding protein [Schistosoma mansoni]
gi|360043943|emb|CCD81489.1| putative polypyrimidine tract binding protein [Schistosoma mansoni]
Length = 597
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 67/142 (47%), Gaps = 3/142 (2%)
Query: 82 DLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN-MQYAV 140
+L +++ H+ + + + + +A+ + L G + VL ++N M +
Sbjct: 96 NLVMQYSKHQHLELHSENSSIGNAIQNANCIVQQDLSGANSGMPTTVLRVVVDNIMGQQI 155
Query: 141 TLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLH 200
+LH +F +G + +I + KN L+++ + A VA L G IY G C L
Sbjct: 156 NHTILHKIFYRYGKILRIVTYLKNNQYHGLVEFGNHIHAFVAMLHLNGQNIYT-GCCSLR 214
Query: 201 ISYSRHTD-LSIKVNNDRSRDY 221
+ +S++ L ++ +DR RDY
Sbjct: 215 VQFSKNRGPLEVRQESDRCRDY 236
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 8/84 (9%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
++F +G + +I T+ K + LV+F + A A L+G++I G C+LR
Sbjct: 162 KIFYRYGKILRIVTYLKNNQYHGLVEFGNHIHAFVAMLHLNGQNIY-------TGCCSLR 214
Query: 75 ITYSAHTD-LSVKFQSHRSRDYTN 97
+ +S + L V+ +S R RDY N
Sbjct: 215 VQFSKNRGPLEVRQESDRCRDYLN 238
>gi|145526162|ref|XP_001448892.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124416458|emb|CAK81495.1| unnamed protein product [Paramecium tetraurelia]
Length = 362
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 67/127 (52%), Gaps = 11/127 (8%)
Query: 123 EPESNVLLASIENMQ--YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAV 180
+P S +LL I + + + D+L F+ +G ++KI +F++ +A ++Y DV+ A+
Sbjct: 7 DPPSKILLLVITQLSPTFPLCNDLLFEQFAKYGDIKKILIFERGKANKAFVEYYDVKHAI 66
Query: 181 VAKEALEGHCIYDG-GFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNS-------Q 232
A++ G + +G G +H S ++ DL + V+ R DYT S+ ++
Sbjct: 67 EARKDKLGKYLAEGEGKLTIHFSRLKNLDLEV-VDKSRGTDYTQASSTNSDTMKHSNTDD 125
Query: 233 PSILGQQ 239
P++L QQ
Sbjct: 126 PNVLRQQ 132
>gi|256080379|ref|XP_002576459.1| heterogeneous nuclear ribonucleoprotein [Schistosoma mansoni]
Length = 597
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 61/112 (54%), Gaps = 3/112 (2%)
Query: 122 LEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 181
L ++++LL +I + +T++ ++ + ++G V +I +F K+ +QA++++ VQ A
Sbjct: 191 LSADNHILLFTIYDTDRPITVETIYRITFSYGSVLRIVIFRKSQ-VQAMVEFGSVQEARN 249
Query: 182 AKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDY-TLPSTPMVNSQ 232
AK L G I+ G C L + Y+R LS+ N+ + D+ P N Q
Sbjct: 250 AKLHLNGADIF-PGCCTLKVDYARPARLSVPRNDQDNWDFEKCERDPFCNFQ 300
>gi|145511796|ref|XP_001441820.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124409081|emb|CAK74423.1| unnamed protein product [Paramecium tetraurelia]
Length = 363
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 66/129 (51%), Gaps = 15/129 (11%)
Query: 123 EPESNVLLASIENMQ--YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAV 180
+P S +LL I + + + D+L F +G ++KI +F++ +A ++Y D++ A+
Sbjct: 7 DPPSKILLLVITQLSPTFPLCNDLLFEQFGKYGDIKKILIFERGKANKAFVEYYDIKHAI 66
Query: 181 VAKEALEGHCIYDG-GFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNS-------- 231
A++ G + +G G +H S ++ DL + V+ R DYT T + NS
Sbjct: 67 EARKDKIGKYLAEGEGKLTIHFSRLKNLDLEV-VDKSRGTDYT--QTSITNSDVVKHSNT 123
Query: 232 -QPSILGQQ 239
P+IL QQ
Sbjct: 124 DDPNILRQQ 132
>gi|350854988|emb|CAZ32696.2| heterogeneous nuclear ribonucleoprotein l (hnrnp l), putative
[Schistosoma mansoni]
Length = 522
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 60/112 (53%), Gaps = 3/112 (2%)
Query: 122 LEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 181
L ++++LL +I + +T++ ++ + ++G V +I +F K +QA++++ VQ A
Sbjct: 116 LSADNHILLFTIYDTDRPITVETIYRITFSYGSVLRIVIFRK-SQVQAMVEFGSVQEARN 174
Query: 182 AKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDY-TLPSTPMVNSQ 232
AK L G I+ G C L + Y+R LS+ N+ + D+ P N Q
Sbjct: 175 AKLHLNGADIF-PGCCTLKVDYARPARLSVPRNDQDNWDFEKCERDPFCNFQ 225
>gi|13435822|gb|AAH04763.1| Hnrpll protein, partial [Mus musculus]
Length = 340
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 71/154 (46%), Gaps = 21/154 (13%)
Query: 166 GLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 225
G+QA++++ V A AK AL G IY G C L I Y+R T L++ N++ S DYT
Sbjct: 3 GIQAMVEFESVLCAQKAKAALNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT--- 58
Query: 226 TPMVNSQPSILGQQPVPMVGATANQYNGAQFAPPPPEQPMMHQPTAAGWGA--------- 276
P + + G+Q ++G + + + P P+ P+ G+
Sbjct: 59 KPYLGRRDRGKGRQRQAILGDHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAY 115
Query: 277 -VPPASQSMPMMGNHPYMPPGSMPMGPGMMQMHM 309
+P AS S G+ P GS+ M G+ Q+ M
Sbjct: 116 PLPQASSSYMHGGS----PSGSVVMVSGLHQLKM 145
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 34 GFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAHTDLSVKFQSHRSR 93
G QA+V+F A AK AL+G I G CTL+I Y+ T L+V + S
Sbjct: 3 GIQAMVEFESVLCAQKAKAALNGADI-------YAGCCTLKIEYARPTRLNVIRNDNDSW 55
Query: 94 DYTNPYL 100
DYT PYL
Sbjct: 56 DYTKPYL 62
>gi|145516865|ref|XP_001444321.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124411732|emb|CAK76924.1| unnamed protein product [Paramecium tetraurelia]
Length = 362
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 56/105 (53%), Gaps = 9/105 (8%)
Query: 143 DVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDG-GFCKLHI 201
++L FS +G ++KI +F++ +A ++Y DV+ A+ A++ G + +G G +H
Sbjct: 29 ELLFEQFSKYGDIKKILIFERGKANKAFVEYYDVKHAIEARKDKLGKYLAEGEGKLTIHF 88
Query: 202 SYSRHTDLSIKVNNDRSRDYTLPSTPMVN-------SQPSILGQQ 239
S ++ DL + V+ R DYT S+ + P+IL QQ
Sbjct: 89 SRLKNLDLEV-VDKSRGTDYTQASSTNSDLMKHSNTDDPNILRQQ 132
>gi|226481683|emb|CAX73739.1| Heterogeneous nuclear ribonucleoprotein L [Schistosoma japonicum]
Length = 518
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 58/100 (58%), Gaps = 2/100 (2%)
Query: 122 LEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 181
L ++++LL +I + +T++ ++ + ++G V +I +F K +QA++++ ++Q A
Sbjct: 116 LSTDNHILLFTIYDTDRPITVETIYRITFSYGNVLRIVIFRK-SQVQAMVEFGNIQEARK 174
Query: 182 AKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDY 221
AK L G I+ G C L + Y+R L++ N+ + D+
Sbjct: 175 AKLHLNGADIF-PGCCTLKVDYARPARLTVPRNDQDNWDF 213
>gi|226481681|emb|CAX73738.1| Heterogeneous nuclear ribonucleoprotein L [Schistosoma japonicum]
Length = 518
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 58/100 (58%), Gaps = 2/100 (2%)
Query: 122 LEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 181
L ++++LL +I + +T++ ++ + ++G V +I +F K +QA++++ ++Q A
Sbjct: 116 LSTDNHILLFTIYDTDRPITVETIYRITFSYGNVLRIVIFRK-SQVQAMVEFGNIQEARK 174
Query: 182 AKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDY 221
AK L G I+ G C L + Y+R L++ N+ + D+
Sbjct: 175 AKLHLNGADIF-PGCCTLKVDYARPARLTVPRNDQDNWDF 213
>gi|226467722|emb|CAX69737.1| Heterogeneous nuclear ribonucleoprotein L [Schistosoma japonicum]
Length = 562
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 58/100 (58%), Gaps = 2/100 (2%)
Query: 122 LEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 181
L ++++LL +I + +T++ ++ + ++G V +I +F K +QA++++ ++Q A
Sbjct: 116 LSTDNHILLFTIYDTDRPITVETIYRITFSYGNVLRIVIFRK-SQVQAMVEFGNIQEARK 174
Query: 182 AKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDY 221
AK L G I+ G C L + Y+R L++ N+ + D+
Sbjct: 175 AKLHLNGADIF-PGCCTLKVDYARPARLTVPRNDQDNWDF 213
>gi|118384092|ref|XP_001025199.1| polypyrimidine tract-binding protein 1 (PTB) [Tetrahymena
thermophila]
gi|89306966|gb|EAS04954.1| polypyrimidine tract-binding protein 1 (PTB) [Tetrahymena
thermophila SB210]
Length = 1302
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 54/111 (48%), Gaps = 3/111 (2%)
Query: 124 PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKN-GGLQALIQYPDVQTAVVA 182
P S +L+ E +T D L +FS +G V K+ +F K+ +A I+ V++A A
Sbjct: 404 PSSVLLVIVFELKDLQITNDQLQQIFSPYGFVNKVLIFQKSTDSTKAFIEMNSVESAKKA 463
Query: 183 KEALEGHCI--YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNS 231
KEAL I K + YS+ TDL++ +DY L S + NS
Sbjct: 464 KEALNRAKIPLLPNQKYKFKVHYSQTTDLNLCNYKTEGKDYRLSSNKITNS 514
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Query: 15 QVFSAFGFVHKITTFEK-TAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTL 73
Q+FS +GFV+K+ F+K T +A ++ + E+A AK AL+ IP LLP
Sbjct: 427 QIFSPYGFVNKVLIFQKSTDSTKAFIEMNSVESAKKAKEALNRAKIP--LLPN--QKYKF 482
Query: 74 RITYSAHTDLSVKFQSHRSRDY 95
++ YS TDL++ +DY
Sbjct: 483 KVHYSQTTDLNLCNYKTEGKDY 504
>gi|226468142|emb|CAX76298.1| Regulator of differentiation 1 [Schistosoma japonicum]
Length = 495
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 66/141 (46%), Gaps = 3/141 (2%)
Query: 83 LSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN-MQYAVT 141
L +++ H+ + + + + +A+ + L G + VL ++N M +
Sbjct: 26 LVMQYSKHQHLELHSENTSIGNAIQNANCIVQQDLSGANSGMPTTVLRVVVDNIMGQQIN 85
Query: 142 LDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHI 201
+LH +F +G + +I + KN L+++ + A VA L G IY G C L +
Sbjct: 86 HTILHKIFYRYGKILRIVTYLKNNQYHGLVEFGNHIHAFVAMLHLNGQNIYT-GCCSLRV 144
Query: 202 SYSRHTD-LSIKVNNDRSRDY 221
+S++ L ++ +++ RDY
Sbjct: 145 QFSKNRGPLEVRQESEKCRDY 165
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 8/84 (9%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
++F +G + +I T+ K + LV+F + A A L+G++I G C+LR
Sbjct: 91 KIFYRYGKILRIVTYLKNNQYHGLVEFGNHIHAFVAMLHLNGQNIY-------TGCCSLR 143
Query: 75 ITYSAHTD-LSVKFQSHRSRDYTN 97
+ +S + L V+ +S + RDY N
Sbjct: 144 VQFSKNRGPLEVRQESEKCRDYLN 167
>gi|395751132|ref|XP_002829227.2| PREDICTED: heterogeneous nuclear ribonucleoprotein L isoform 2,
partial [Pongo abelii]
Length = 248
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 37/49 (75%), Gaps = 1/49 (2%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYP 174
++VLL +I N Y++T DVL+ + + GPVQ+I +F KN G+QA+++YP
Sbjct: 192 NSVLLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKN-GVQAMVEYP 239
>gi|226468144|emb|CAX76299.1| Regulator of differentiation 1 [Schistosoma japonicum]
Length = 436
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 70/150 (46%), Gaps = 4/150 (2%)
Query: 74 RITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASI 133
++T T L +++ H+ + + + + +A+ + L G + VL +
Sbjct: 103 QVTLRGRT-LVMQYSKHQHLELHSENTSIGNAIQNANCIVQQDLSGANSGMPTTVLRVVV 161
Query: 134 EN-MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 192
+N M + +LH +F +G + +I + KN L+++ + A VA L G IY
Sbjct: 162 DNIMGQQINHTILHKIFYRYGKILRIVTYLKNNQYHGLVEFGNHIHAFVAMLHLNGQNIY 221
Query: 193 DGGFCKLHISYSRHTD-LSIKVNNDRSRDY 221
G C L + +S++ L ++ +++ RDY
Sbjct: 222 T-GCCSLRVQFSKNRGPLEVRQESEKCRDY 250
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 8/84 (9%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
++F +G + +I T+ K + LV+F + A A L+G++I G C+LR
Sbjct: 176 KIFYRYGKILRIVTYLKNNQYHGLVEFGNHIHAFVAMLHLNGQNIY-------TGCCSLR 228
Query: 75 ITYSAHTD-LSVKFQSHRSRDYTN 97
+ +S + L V+ +S + RDY N
Sbjct: 229 VQFSKNRGPLEVRQESEKCRDYLN 252
>gi|123491774|ref|XP_001325911.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121908818|gb|EAY13688.1| hypothetical protein TVAG_371620 [Trichomonas vaginalis G3]
Length = 412
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 150 SAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDL 209
S FG V KI F+K+G AL+Q +Q A +A L ++ F KL I +S++ D+
Sbjct: 127 SLFGTVDKIICFEKSGKF-ALVQMHTIQDAGLALYNLSNCERHNPSF-KLRIQFSKNHDI 184
Query: 210 SIKVNNDRSRDYTLPSTPM 228
IK NN +S D+T PS +
Sbjct: 185 VIKFNNTKSFDFTQPSARL 203
Score = 40.8 bits (94), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 16/104 (15%)
Query: 1 MCLTLSLLKVIF-ILQVF---SAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDG 56
+C+ ++ L++ I ++ S FG V KI FEK+ F ALVQ + A A L
Sbjct: 106 ICVQVNRLRLYLGIYDIYDQCSLFGTVDKIICFEKSGKF-ALVQMHTIQDAGLALYNLSN 164
Query: 57 --RSIPRYLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNP 98
R P + LRI +S + D+ +KF + +S D+T P
Sbjct: 165 CERHNPSF---------KLRIQFSKNHDIVIKFNNTKSFDFTQP 199
>gi|145532711|ref|XP_001452111.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124419788|emb|CAK84714.1| unnamed protein product [Paramecium tetraurelia]
Length = 651
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 56/103 (54%), Gaps = 3/103 (2%)
Query: 124 PESNVLLASIENMQYAVTL--DVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 181
P +NV+L I N + TL D + VFS FG +Q++ +F+++ + I++ ++++A
Sbjct: 12 PNTNVILVVITN-KANKTLPHDKYYKVFSPFGTIQRMLIFERSLTWKTFIEFDNIESAFK 70
Query: 182 AKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP 224
A+ + D +++ S+ T +S + NN DYT+P
Sbjct: 71 ARSQMNDKQFCDDTSLLMNVYASKLTYISFQENNVWGVDYTIP 113
>gi|76157758|gb|AAX28586.2| SJCHGC05650 protein [Schistosoma japonicum]
Length = 381
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 66/141 (46%), Gaps = 3/141 (2%)
Query: 83 LSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN-MQYAVT 141
L +++ H+ + + + + +A+ + L G + VL ++N M +
Sbjct: 123 LVMQYSKHQHLELHSENTSIGNAIQNANCIVQQDLSGANSGMPTTVLRVVVDNIMGQQIN 182
Query: 142 LDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHI 201
+LH +F +G + +I + KN L+++ + A VA L G IY G C L +
Sbjct: 183 HTILHKIFYRYGKILRIVTYLKNNQYHGLVEFGNHIHAFVAMLHLNGQNIYT-GCCSLRV 241
Query: 202 SYSRHTD-LSIKVNNDRSRDY 221
+S++ L ++ +++ RDY
Sbjct: 242 QFSKNRGPLEVRQESEKCRDY 262
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 8/84 (9%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
++F +G + +I T+ K + LV+F + A A L+G++I G C+LR
Sbjct: 188 KIFYRYGKILRIVTYLKNNQYHGLVEFGNHIHAFVAMLHLNGQNIY-------TGCCSLR 240
Query: 75 ITYSAHTD-LSVKFQSHRSRDYTN 97
+ +S + L V+ +S + RDY N
Sbjct: 241 VQFSKNRGPLEVRQESEKCRDYLN 264
>gi|1370048|emb|CAA64866.1| mec-8 [Caenorhabditis elegans]
Length = 312
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 37/74 (50%)
Query: 133 IENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 192
+ N+ V D L VF AF ++ + +KNG A ++Y D+Q A A +L+G I
Sbjct: 232 VANLSAEVNEDTLRGVFKAFSGFTRLRLHNKNGSCVAFVEYSDLQKATQAMISLQGFQIT 291
Query: 193 DGGFCKLHISYSRH 206
L I Y+R+
Sbjct: 292 ANDRGGLRIEYARN 305
>gi|17508419|ref|NP_492508.1| Protein MEC-8 [Caenorhabditis elegans]
gi|1369981|emb|CAA64867.1| mec-8 [Caenorhabditis elegans]
gi|3877217|emb|CAB03111.1| Protein MEC-8 [Caenorhabditis elegans]
Length = 312
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 37/74 (50%)
Query: 133 IENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 192
+ N+ V D L VF AF ++ + +KNG A ++Y D+Q A A +L+G I
Sbjct: 232 VANLSAEVNEDTLRGVFKAFSGFTRLRLHNKNGSCVAFVEYSDLQKATQAMISLQGFQIT 291
Query: 193 DGGFCKLHISYSRH 206
L I Y+R+
Sbjct: 292 ANDRGGLRIEYARN 305
>gi|226472642|emb|CAX71007.1| Regulator of differentiation 1 [Schistosoma japonicum]
Length = 622
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 66/141 (46%), Gaps = 3/141 (2%)
Query: 83 LSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN-MQYAVT 141
L +++ H+ + + + + +A+ + L G + VL ++N M +
Sbjct: 123 LVMQYSKHQHLELHSENTSIGNAIQNANCIVQQDLSGANSGMPTTVLRVVVDNIMGQQIN 182
Query: 142 LDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHI 201
+LH +F +G + +I + KN L+++ + A VA L G IY G C L +
Sbjct: 183 HTILHKIFYRYGKILRIVTYLKNNQYHGLVEFGNHIHAFVAMLHLNGQNIYT-GCCSLRV 241
Query: 202 SYSRHTD-LSIKVNNDRSRDY 221
+S++ L ++ +++ RDY
Sbjct: 242 QFSKNRGPLEVRQESEKCRDY 262
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 8/84 (9%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
++F +G + +I T+ K + LV+F + A A L+G++I G C+LR
Sbjct: 188 KIFYRYGKILRIVTYLKNNQYHGLVEFGNHIHAFVAMLHLNGQNIY-------TGCCSLR 240
Query: 75 ITYSAHTD-LSVKFQSHRSRDYTN 97
+ +S + L V+ +S + RDY N
Sbjct: 241 VQFSKNRGPLEVRQESEKCRDYLN 264
>gi|226472640|emb|CAX71006.1| Regulator of differentiation 1 [Schistosoma japonicum]
Length = 596
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 66/141 (46%), Gaps = 3/141 (2%)
Query: 83 LSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN-MQYAVT 141
L +++ H+ + + + + +A+ + L G + VL ++N M +
Sbjct: 97 LVMQYSKHQHLELHSENTSIGNAIQNANCIVQQDLSGANSGMPTTVLRVVVDNIMGQQIN 156
Query: 142 LDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHI 201
+LH +F +G + +I + KN L+++ + A VA L G IY G C L +
Sbjct: 157 HTILHKIFYRYGKILRIVTYLKNNQYHGLVEFGNHIHAFVAMLHLNGQNIYT-GCCSLRV 215
Query: 202 SYSRHTD-LSIKVNNDRSRDY 221
+S++ L ++ +++ RDY
Sbjct: 216 QFSKNRGPLEVRQESEKCRDY 236
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 8/84 (9%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
++F +G + +I T+ K + LV+F + A A L+G++I G C+LR
Sbjct: 162 KIFYRYGKILRIVTYLKNNQYHGLVEFGNHIHAFVAMLHLNGQNIY-------TGCCSLR 214
Query: 75 ITYSAHTD-LSVKFQSHRSRDYTN 97
+ +S + L V+ +S + RDY N
Sbjct: 215 VQFSKNRGPLEVRQESEKCRDYLN 238
>gi|226468148|emb|CAX76301.1| Regulator of differentiation 1 [Schistosoma japonicum]
Length = 610
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 66/141 (46%), Gaps = 3/141 (2%)
Query: 83 LSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN-MQYAVT 141
L +++ H+ + + + + +A+ + L G + VL ++N M +
Sbjct: 111 LVMQYSKHQHLELHSENTSIGNAIQNANCIVQQDLSGANSGMPTTVLRVVVDNIMGQQIN 170
Query: 142 LDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHI 201
+LH +F +G + +I + KN L+++ + A VA L G IY G C L +
Sbjct: 171 HTILHKIFYRYGKILRIVTYLKNNQYHGLVEFGNHIHAFVAMLHLNGQNIYT-GCCSLRV 229
Query: 202 SYSRHTD-LSIKVNNDRSRDY 221
+S++ L ++ +++ RDY
Sbjct: 230 QFSKNRGPLEVRQESEKCRDY 250
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 8/84 (9%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
++F +G + +I T+ K + LV+F + A A L+G++I G C+LR
Sbjct: 176 KIFYRYGKILRIVTYLKNNQYHGLVEFGNHIHAFVAMLHLNGQNIY-------TGCCSLR 228
Query: 75 ITYSAHTD-LSVKFQSHRSRDYTN 97
+ +S + L V+ +S + RDY N
Sbjct: 229 VQFSKNRGPLEVRQESEKCRDYLN 252
>gi|226468146|emb|CAX76300.1| Regulator of differentiation 1 [Schistosoma japonicum]
Length = 622
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 66/141 (46%), Gaps = 3/141 (2%)
Query: 83 LSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN-MQYAVT 141
L +++ H+ + + + + +A+ + L G + VL ++N M +
Sbjct: 123 LVMQYSKHQHLELHSENTSIGNAIQNANCIVQQDLSGANSGMPTTVLRVVVDNIMGQQIN 182
Query: 142 LDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHI 201
+LH +F +G + +I + KN L+++ + A VA L G IY G C L +
Sbjct: 183 HTILHKIFYRYGKILRIVTYLKNNQYHGLVEFGNHIHAFVAMLHLNGQNIYT-GCCSLRV 241
Query: 202 SYSRHTD-LSIKVNNDRSRDY 221
+S++ L ++ +++ RDY
Sbjct: 242 QFSKNRGPLEVRQESEKCRDY 262
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 8/84 (9%)
Query: 15 QVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 74
++F +G + +I T+ K + LV+F + A A L+G++I G C+LR
Sbjct: 188 KIFYRYGKILRIVTYLKNNQYHGLVEFGNHIHAFVAMLHLNGQNIY-------TGCCSLR 240
Query: 75 ITYSAHTD-LSVKFQSHRSRDYTN 97
+ +S + L V+ +S + RDY N
Sbjct: 241 VQFSKNRGPLEVRQESEKCRDYLN 264
>gi|154422945|ref|XP_001584484.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121918731|gb|EAY23498.1| conserved hypothetical protein [Trichomonas vaginalis G3]
Length = 314
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 150 SAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDL 209
S FG VQKI F+K G AL+Q +V A + L Y F +L + YS++T++
Sbjct: 128 SHFGVVQKIICFEKKGKY-ALLQMENVDQAALVLANLSIPNRYAPSF-ELRVQYSKNTNI 185
Query: 210 SIKVNNDRSRDYTLP 224
I+ NN +S D+T+P
Sbjct: 186 VIQYNNSKSFDFTVP 200
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 86/197 (43%), Gaps = 35/197 (17%)
Query: 18 SAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITY 77
S FG V KI FEK + AL+Q + + A+ L SIP P LR+ Y
Sbjct: 128 SHFGVVQKIICFEKKGKY-ALLQMENVDQAALV---LANLSIPNRYAPS----FELRVQY 179
Query: 78 SAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGK--KLEPES-NVLLASIE 134
S +T++ +++ + +S D+T P A+D L GL + EPES N + S +
Sbjct: 180 SKNTNIVIQYNNSKSFDFT------VPGALDEFELLREGLTNEVPYFEPESCNEIPRSFD 233
Query: 135 NMQ-------YAVTLDVLHM----------VFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 177
++ Y +L V + +F +G V K+ + K + +Q +
Sbjct: 234 FVRPVQFDPAYGNSLTVTGLPANQATFARNIFQQYGAVLKVKVMTKQNEVLTYVQMRNAF 293
Query: 178 TAVVAKEALEGHCIYDG 194
A +A + G +++G
Sbjct: 294 YARLAMTNINGM-VFNG 309
>gi|268564730|ref|XP_002639203.1| C. briggsae CBR-MEC-8 protein [Caenorhabditis briggsae]
Length = 305
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 37/74 (50%)
Query: 133 IENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 192
+ N+ V D L VF AF ++ + +KNG A ++Y D+Q A A AL+G +
Sbjct: 225 VANLSAEVNEDQLRGVFKAFTGFTRLRLHNKNGSCVAFVEYSDLQKATQAMLALQGFQVS 284
Query: 193 DGGFCKLHISYSRH 206
L I Y+R+
Sbjct: 285 ANDRGGLRIEYARN 298
>gi|125589639|gb|EAZ29989.1| hypothetical protein OsJ_14050 [Oryza sativa Japonica Group]
gi|218194466|gb|EEC76893.1| hypothetical protein OsI_15106 [Oryza sativa Indica Group]
Length = 201
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 185
VL + N+ Y VT D+LH VF A+G +KI ++ ++A +Q+ + A A++
Sbjct: 20 EQVLHVTASNLLYPVTKDLLHRVFYAYG-AKKICLYQMETRVEASVQFQSREDAEYARKT 78
Query: 186 LEGHCIYDGGFCKL 199
GH IY G C++
Sbjct: 79 FHGHNIYHGC-CQM 91
>gi|149050610|gb|EDM02783.1| heterogeneous nuclear ribonucleoprotein L-like (predicted), isoform
CRA_b [Rattus norvegicus]
Length = 410
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 77/176 (43%), Gaps = 21/176 (11%)
Query: 144 VLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISY 203
+ +++++ + ++ + G + + + V A AK AL G IY G C L I Y
Sbjct: 51 MFYILYATLLEKYSVLLYSREMGYKQCLTFESVLCAQKAKAALNGADIY-AGCCTLKIEY 109
Query: 204 SRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQYNGAQFAPPPPEQ 263
+R T L++ N++ S DYT P + + G+Q ++G + + + P
Sbjct: 110 ARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILGDHPSSFRHDGYGSHGPLL 166
Query: 264 PMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPPGSMPMGPGMMQMHM 309
P+ P+ G+ +P AS S G+ P GS+ M G+ Q+ M
Sbjct: 167 PL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGS----PSGSVVMVSGLHQLKM 215
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 13/103 (12%)
Query: 4 TLSLLKVIFI-LQ-----VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGR 57
+ SL +++FI LQ +++ + + + + G++ + F A AK AL+G
Sbjct: 37 SCSLFRILFIQLQWMFYILYATLLEKYSVLLYSREMGYKQCLTFESVLCAQKAKAALNGA 96
Query: 58 SIPRYLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
I G CTL+I Y+ T L+V + S DYT PYL
Sbjct: 97 DI-------YAGCCTLKIEYARPTRLNVIRNDNDSWDYTKPYL 132
>gi|118382059|ref|XP_001024189.1| hypothetical protein TTHERM_00456820 [Tetrahymena thermophila]
gi|89305956|gb|EAS03944.1| hypothetical protein TTHERM_00456820 [Tetrahymena thermophila
SB210]
Length = 842
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 59/124 (47%), Gaps = 2/124 (1%)
Query: 108 DASGQLSVGLDGKKLEPESNVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGG 166
D SG+ S + + VLL + N + +T D+++ +F +G + KI +FDK
Sbjct: 20 DYSGRRSQKTTISDVSVKKRVLLVCVYNKKGTLITHDIIYRLFMKYGEIYKILIFDKCKN 79
Query: 167 LQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPST 226
+ ++ ++ A A++ L + ++D G K+ + Y++ + + NN DY
Sbjct: 80 WKIFVEMATLEQAEKARDGLNNYQLFDDG-SKMTVYYAKVDQIVFQNNNSGGVDYRELKQ 138
Query: 227 PMVN 230
VN
Sbjct: 139 RKVN 142
>gi|341895190|gb|EGT51125.1| CBN-MEC-8 protein [Caenorhabditis brenneri]
gi|341898355|gb|EGT54290.1| hypothetical protein CAEBREN_29517 [Caenorhabditis brenneri]
Length = 313
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%)
Query: 133 IENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 192
+ N+ V D L VF AF ++ + +KNG A ++Y D+Q A A +L+G +
Sbjct: 233 VANLSAEVNEDQLRGVFKAFSGFTRLRLHNKNGSCVAFVEYSDLQKATQAMMSLQGFQVS 292
Query: 193 DGGFCKLHISYSRH 206
L I Y+R+
Sbjct: 293 ANDRGGLRIEYARN 306
>gi|37806432|dbj|BAC99625.1| hypothetical protein [Oryza sativa Japonica Group]
gi|125603374|gb|EAZ42699.1| hypothetical protein OsJ_27267 [Oryza sativa Japonica Group]
Length = 401
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 59/104 (56%), Gaps = 4/104 (3%)
Query: 101 PVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAM 160
P A S++D S ++ + K ++VL ++ ++ Y VT +VL VFS +G +++ +
Sbjct: 58 PGATSSVD-SQKVFDEMPSNKEPTTASVLHVTMSHVLYPVTAEVLLQVFSPYG-AEEVRV 115
Query: 161 FDKNG-GLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISY 203
+++ ++A I + Q A A+EAL G CIY+G C L + Y
Sbjct: 116 YNQGTIQVEAFILFRLCQDATRAREALHGCCIYNGC-CFLDVKY 158
>gi|328792474|ref|XP_003251729.1| PREDICTED: hypothetical protein LOC100577881 [Apis mellifera]
Length = 120
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYP 174
++VLL +I N Y +T++VLH + + G VQ+I +F KN G+QA+++YP
Sbjct: 43 NHVLLFTIINPVYPITVEVLHTISAPSGQVQRIVIFKKN-GVQAMVEYP 90
>gi|198417513|ref|XP_002121186.1| PREDICTED: similar to heterogeneous nuclear ribonucleoprotein L
[Ciona intestinalis]
Length = 106
Score = 46.2 bits (108), Expect = 0.023, Method: Composition-based stats.
Identities = 23/49 (46%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYP 174
+ VLL ++ N Y +T DVLHM+ G VQ+I +F K G+QA+I+YP
Sbjct: 52 NKVLLFTVVNAVYPITTDVLHMICEPCGEVQRIVIFRKR-GVQAMIEYP 99
>gi|123500629|ref|XP_001327903.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121910839|gb|EAY15680.1| conserved hypothetical protein [Trichomonas vaginalis G3]
Length = 432
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 150 SAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDL 209
S FG V+KI F+K G AL+Q V+ A + L Y F +L + YS++ ++
Sbjct: 128 SHFGIVEKIICFEKQGKF-ALVQMQTVEQAALVLANLTIPNRYAPSF-ELRVQYSKNANI 185
Query: 210 SIKVNNDRSRDYTLP 224
I+ NN +S D+TLP
Sbjct: 186 VIQFNNSKSFDFTLP 200
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 8/81 (9%)
Query: 18 SAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITY 77
S FG V KI FEK F ALVQ E A+ L +IP P LR+ Y
Sbjct: 128 SHFGIVEKIICFEKQGKF-ALVQMQTVEQAALV---LANLTIPNRYAPS----FELRVQY 179
Query: 78 SAHTDLSVKFQSHRSRDYTNP 98
S + ++ ++F + +S D+T P
Sbjct: 180 SKNANIVIQFNNSKSFDFTLP 200
>gi|405972821|gb|EKC37569.1| Heterogeneous nuclear ribonucleoprotein L [Crassostrea gigas]
Length = 186
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQAL 170
+++LL ++ N QY +T+DV+H + +A+G VQ+I +F KN G+QA+
Sbjct: 118 NHILLFTVLNPQYPITVDVMHKICTAYGQVQRIVIFKKN-GVQAM 161
>gi|440793956|gb|ELR15127.1| protein kinase domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 515
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 13/89 (14%)
Query: 12 FILQVFSAFGFVHKITTF-----------EKTAGFQALVQFSDTETASSAKNALDGRSIP 60
+ Q+FS++GF+ KI + + Q LVQFS +A +A L+G+++
Sbjct: 271 IVWQIFSSYGFIEKIVVMNRQSQEYAEESRRDSRLQTLVQFSSPASAQTASQYLNGKTV- 329
Query: 61 RYLLPENMGPCTLRITYSAHTDLSVKFQS 89
Y+ + + TL I YS T L+VK S
Sbjct: 330 -YVGTDPIMSITLFIQYSHLTQLTVKHNS 357
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 91/222 (40%), Gaps = 64/222 (28%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPE-NMGPC 71
I+++ + FG V K+ T+ QAL++F+D A S N YL + N+
Sbjct: 181 IMELAAPFGTVEKVVML--TSKNQALLEFADIAAAISMSNF--------YLSTQPNIRGR 230
Query: 72 TLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLA 131
+ + +S H L+ A+G + +LL
Sbjct: 231 KVYMRFSRHQQLTAS----------------------AAG-------------PNRILLV 255
Query: 132 SIENMQYAV---TLDVLHMVFSAFGPVQKIAMFD-----------KNGGLQALIQYPDVQ 177
+++ Q V T D++ +FS++G ++KI + + ++ LQ L+Q+
Sbjct: 256 TLQTEQEPVIPITADIVWQIFSSYGFIEKIVVMNRQSQEYAEESRRDSRLQTLVQFSSPA 315
Query: 178 TAVVAKEALEGHCIYDGG----FCKLHISYSRHTDLSIKVNN 215
+A A + L G +Y G L I YS T L++K N+
Sbjct: 316 SAQTASQYLNGKTVYVGTDPIMSITLFIQYSHLTQLTVKHNS 357
>gi|218201133|gb|EEC83560.1| hypothetical protein OsI_29204 [Oryza sativa Indica Group]
Length = 260
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 48/79 (60%), Gaps = 3/79 (3%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNG-GLQALIQYPDVQTAVVAKE 184
++VL ++ ++ Y VT +VL VFS +G +++ ++++ ++A I + Q A A+E
Sbjct: 82 ASVLHVTMSHVLYPVTAEVLLQVFSPYG-AEEVRVYNQGTIQVEAFILFRLCQDATRARE 140
Query: 185 ALEGHCIYDGGFCKLHISY 203
AL G CIY+G C L + Y
Sbjct: 141 ALHGCCIYNGC-CFLDVKY 158
>gi|294931323|ref|XP_002779833.1| neural polypyrimidine tract binding protein, putative [Perkinsus
marinus ATCC 50983]
gi|239889519|gb|EER11628.1| neural polypyrimidine tract binding protein, putative [Perkinsus
marinus ATCC 50983]
Length = 210
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 37/78 (47%), Gaps = 9/78 (11%)
Query: 25 KITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPC-TLRITYSAHTDL 83
++ F + ALV+ E A K LDG++I C TLRI YS+ L
Sbjct: 17 RVIVFHRGTVMHALVETKSQEIADQVKRELDGQNI--------FTQCNTLRIRYSSFRQL 68
Query: 84 SVKFQSHRSRDYTNPYLP 101
V + + RS D+TN LP
Sbjct: 69 HVNYNNERSWDFTNAGLP 86
>gi|383856701|ref|XP_003703846.1| PREDICTED: uncharacterized protein LOC100878109 [Megachile
rotundata]
Length = 141
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYP 174
++VLL +I N Y +T++VLH + + G VQ+I +F KN G+QA+++YP
Sbjct: 43 NHVLLFTIINPVYPITVEVLHTISAPSGQVQRIVIFKKN-GVQAMVEYP 90
>gi|145503200|ref|XP_001437577.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124404728|emb|CAK70180.1| unnamed protein product [Paramecium tetraurelia]
Length = 601
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 55/100 (55%), Gaps = 3/100 (3%)
Query: 126 SNVLLASIENMQYAVTL--DVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAK 183
+NV+L I N + TL D VFS FG +Q++ +F+++ + I++ + ++A+ A+
Sbjct: 6 TNVILVVITN-KANKTLGHDKYFKVFSQFGTIQRMLIFERSLTWKTFIEFDNPESAIKAR 64
Query: 184 EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTL 223
+++ D +++ S+ T ++ + NN DYTL
Sbjct: 65 QSMNDKLFCDDAQLTMNVYASKLTYITFQENNTGGVDYTL 104
>gi|358383610|gb|EHK21274.1| hypothetical protein TRIVIDRAFT_116557, partial [Trichoderma virens
Gv29-8]
Length = 466
Score = 44.7 bits (104), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 62/143 (43%), Gaps = 24/143 (16%)
Query: 96 TNPYLPVA----PSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSA 151
TNP +P A S +DA G LS ++ PE N + + VT DVL +F
Sbjct: 41 TNP-IPTAITSPRSGVDAGGILSPTTGFRRAAPEPNKRALYVGGLDQRVTEDVLRQIFET 99
Query: 152 FGPVQKIAMF-DKN--GGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHT- 207
G VQ + + DKN G ++Y D A A + L G ++ +++ +Y +T
Sbjct: 100 TGHVQNVKIIPDKNAKGYNYGFVEYDDPGAAERAMQTLNGRRVHQSEI-RVNWAYQSNTT 158
Query: 208 --------------DLSIKVNND 216
DLS +VN+D
Sbjct: 159 SKEDTSNHFHIFVGDLSNEVNDD 181
>gi|340522219|gb|EGR52452.1| predicted protein [Trichoderma reesei QM6a]
Length = 477
Score = 44.7 bits (104), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 62/143 (43%), Gaps = 24/143 (16%)
Query: 96 TNPYLPVA----PSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSA 151
TNP +P A S +DA G LS ++ PE N + + VT DVL +F
Sbjct: 39 TNP-IPTAITSPRSGVDAGGILSPTTGFRRAAPEPNKRALYVGGLDQRVTEDVLRQIFET 97
Query: 152 FGPVQKIAMF-DKN--GGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHT- 207
G VQ + + DKN G ++Y D A A + L G ++ +++ +Y +T
Sbjct: 98 TGHVQNVKIIPDKNAKGYNYGFVEYDDPGAAERAMQTLNGRRVHQSEI-RVNWAYQSNTT 156
Query: 208 --------------DLSIKVNND 216
DLS +VN+D
Sbjct: 157 SKEDTSNHFHIFVGDLSNEVNDD 179
>gi|256077594|ref|XP_002575087.1| polypyrimidine tract binding protein [Schistosoma mansoni]
gi|360045192|emb|CCD82740.1| putative polypyrimidine tract binding protein [Schistosoma mansoni]
Length = 584
Score = 44.7 bits (104), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 56/123 (45%), Gaps = 4/123 (3%)
Query: 103 APSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVL--HMVFSAFGPVQKIAM 160
A SA++ + + V + + VL +E + ++ + L M F FG + ++
Sbjct: 131 ATSAVEEANKQFVAFRCENEDSPKTVLHIHVEKLHGSMEIGYLPFFMSFKPFGQILRVIS 190
Query: 161 FDKNGGLQALIQYPDVQTAVVAKEALEGHCIY--DGGFCKLHISYSRHTDLSIKVNNDRS 218
F KN A ++Y + +A VAK + G ++ + F L +SR L I ++
Sbjct: 191 FKKNDSRHAFLEYSNAISAHVAKLQMNGVPLFPMESNFNILRTEFSRQQTLEIHREDNSC 250
Query: 219 RDY 221
RD+
Sbjct: 251 RDF 253
>gi|308494202|ref|XP_003109290.1| CRE-MEC-8 protein [Caenorhabditis remanei]
gi|308246703|gb|EFO90655.1| CRE-MEC-8 protein [Caenorhabditis remanei]
Length = 305
Score = 44.7 bits (104), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 36/74 (48%)
Query: 133 IENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 192
+ N+ V D L VF AF ++ + +KNG A ++Y D+ A A +L+G +
Sbjct: 225 VANLSAEVNEDQLRGVFKAFSGFTRLRLHNKNGSCVAFVEYSDLHKATQAMMSLQGFQVS 284
Query: 193 DGGFCKLHISYSRH 206
L I Y+R+
Sbjct: 285 ANDRGGLRIEYARN 298
>gi|226470156|emb|CAX70359.1| Polypyrimidine tract-binding protein 1 [Schistosoma japonicum]
Length = 415
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 85/208 (40%), Gaps = 26/208 (12%)
Query: 20 FGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCT--LRITY 77
FG + + K+ QALV+ E+A S + M CT LR Y
Sbjct: 66 FGSIANMILTRKSC--QALVEMDTLESAES-------------MFGYYMTVCTPNLRGKY 110
Query: 78 SAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQ 137
T S K+ S + N L SAI+ + + V + + VL +E
Sbjct: 111 PIETQFS-KYSSLTNATTNNATL----SAIEEANKQFVTFRCENEDSPKTVLHIHVEKSY 165
Query: 138 YAVTLDVL--HMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY--D 193
+ + L M F FG + ++ F KN A +++ + +A VAK + G ++ +
Sbjct: 166 NPMEIGYLPFFMAFKPFGRILRVVSFKKNDSRHAFLEFSNSLSAHVAKLLMNGVPLFPME 225
Query: 194 GGFCKLHISYSRHTDLSIKVNNDRSRDY 221
F L +SR + L I ++ SRD+
Sbjct: 226 CNFHILRTEFSRQSTLEIHREDNSSRDF 253
>gi|296224059|ref|XP_002757888.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 2
[Callithrix jacchus]
Length = 509
Score = 44.3 bits (103), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDV 176
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ +V
Sbjct: 167 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVDRLNV 216
>gi|397493591|ref|XP_003817687.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 2
[Pan paniscus]
Length = 505
Score = 44.3 bits (103), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDV 176
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ +V
Sbjct: 163 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVDRLNV 212
>gi|410955436|ref|XP_003984359.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 2
[Felis catus]
Length = 510
Score = 44.3 bits (103), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDV 176
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ +V
Sbjct: 168 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVDRLNV 217
>gi|403269680|ref|XP_003926844.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Saimiri
boliviensis boliviensis]
gi|33518884|gb|AAQ20083.1| stromal RNA regulating factor [Homo sapiens]
Length = 508
Score = 44.3 bits (103), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDV 176
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ +V
Sbjct: 166 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVDRLNV 215
>gi|342183429|emb|CCC92909.1| putative RNA-binding protein [Trypanosoma congolense IL3000]
Length = 320
Score = 44.3 bits (103), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 53/113 (46%), Gaps = 22/113 (19%)
Query: 126 SNVLLASIENMQY------AVTLDVLHMVFSAFGPVQKIAMFDKNGG-------LQALIQ 172
S LL S+ N QY ++T +++ +F +G VQKI + KN +QAL+Q
Sbjct: 170 SKTLLVSMFNTQYDVSAATSITPMIVYQIFCNYGAVQKIVVLPKNDSSQRNHNRVQALVQ 229
Query: 173 YPDVQTAVVAKEALEGHCIYDGGFC--KLHISYSRHTD-------LSIKVNND 216
+ QTA K L+G + G L I +SR + +S+ VN D
Sbjct: 230 FDSKQTAENVKNILQGQPVTIGETVTFTLDIQFSRMDNIKTSNPAISLVVNED 282
>gi|395731919|ref|XP_002812155.2| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 1
[Pongo abelii]
Length = 509
Score = 44.3 bits (103), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDV 176
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ +V
Sbjct: 167 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVDRLNV 216
>gi|109102687|ref|XP_001109883.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 1
[Macaca mulatta]
Length = 508
Score = 44.3 bits (103), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDV 176
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ +V
Sbjct: 166 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVDRLNV 215
>gi|167522112|ref|XP_001745394.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776352|gb|EDQ89972.1| predicted protein [Monosiga brevicollis MX1]
Length = 459
Score = 44.3 bits (103), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 18/100 (18%)
Query: 124 PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAK 183
P S VL +I N + TL+ LH + +G V +I K+G +Q L +Y A VA
Sbjct: 154 PPSRVLSINICNCPFDPTLEFLHAQMARYGQVLRIVTIRKDGDMQVLAEYAQQSEATVAL 213
Query: 184 EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTL 223
AL+ LSI+ N +RD+T+
Sbjct: 214 NALQNET------------------LSIRNNTSSARDFTV 235
>gi|328792476|ref|XP_003251730.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L [Apis
mellifera]
Length = 394
Score = 44.3 bits (103), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 170 LIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 225
+I + V++A AKE L G IY G C L I +++ T L++ N+ S DYT P+
Sbjct: 1 MITFDSVESATRAKETLHGADIYSG-CCTLKIDFAKPTKLNVYKNDAESWDYTTPT 55
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Query: 38 LVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTN 97
++ F E+A+ AK L G I G CTL+I ++ T L+V S DYT
Sbjct: 1 MITFDSVESATRAKETLHGADI-------YSGCCTLKIDFAKPTKLNVYKNDAESWDYTT 53
Query: 98 PYLPVAPSAIDASGQ 112
P L + DA+G
Sbjct: 54 PTLGSSAHKNDATGN 68
>gi|402890608|ref|XP_003908575.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 2
[Papio anubis]
Length = 403
Score = 44.3 bits (103), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDV 176
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ +V
Sbjct: 61 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVDRLNV 110
>gi|380011401|ref|XP_003689795.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Apis
florea]
Length = 100
Score = 43.9 bits (102), Expect = 0.11, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYP 174
++VLL +I N Y +T++VLH + + G VQ+I +F KN G+QA+++YP
Sbjct: 43 NHVLLFTIINPVYPITVEVLHTISAPSGQVQRIVIFKKN-GVQAMVEYP 90
>gi|222616398|gb|EEE52530.1| hypothetical protein OsJ_34752 [Oryza sativa Japonica Group]
Length = 555
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 128 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 187
VL ++ + Y VT +VLH V+ +G V + ++AL+ + A A+ A
Sbjct: 42 VLRVTVSQIIYPVTSEVLHQVYDTYGAVAVQVLAVSTWQVKALVSFMSSHDAERARSATH 101
Query: 188 GHCIYDGGFCKLHISY 203
G IYDGG C L + +
Sbjct: 102 GRDIYDGG-CLLDVQH 116
>gi|341889641|gb|EGT45576.1| hypothetical protein CAEBREN_06918 [Caenorhabditis brenneri]
Length = 348
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Query: 133 IENMQYAVTLDVLHMVFSAFGPVQKIAMF-DKNGGL---QALIQYPDVQTAVVAKEALEG 188
+ N+ Y VT D + +FS GPV I M D+ G I++PD+QTA A L G
Sbjct: 21 VGNISYDVTEDTIRAMFSKAGPVMSIKMVHDRETGKPKGYGFIEFPDIQTADTAIRVLNG 80
Query: 189 HCI 191
H +
Sbjct: 81 HEL 83
>gi|198459570|ref|XP_001361426.2| GA21622 [Drosophila pseudoobscura pseudoobscura]
gi|198136733|gb|EAL26004.2| GA21622 [Drosophila pseudoobscura pseudoobscura]
Length = 369
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 52/109 (47%), Gaps = 14/109 (12%)
Query: 170 LIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNN-DRSRDYTLPSTPM 228
++++ ++ A A+E L G IY G C L I Y++ L++ N D S DYTL +
Sbjct: 1 MVEFDNLDAATRARENLNGADIY-AGCCTLKIDYAKPEKLNVYKNEPDTSWDYTLSTGKS 59
Query: 229 VNSQPS---ILGQQPVPMVGATANQYNGAQFAPPPPEQPMMHQPTAAGW 274
+ S P +L QP P++G GA F PP P H T W
Sbjct: 60 LFSIPENVVMLESQP-PLLGP------GAAF--PPFGAPEYHPTTPDNW 99
>gi|218191723|gb|EEC74150.1| hypothetical protein OsI_09231 [Oryza sativa Indica Group]
Length = 609
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 128 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 187
VL ++ + Y VT +VLH V+ +G V + ++AL+ + A A+ A
Sbjct: 56 VLRVTVSQIIYPVTYEVLHQVYDTYGAVAVQVLAVSTWQVKALVSFMSSHDAERARSATH 115
Query: 188 GHCIYDGGFCKLHISY 203
G IYDGG C L + +
Sbjct: 116 GRDIYDGG-CLLDVQH 130
>gi|407844094|gb|EKG01787.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 325
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 46/99 (46%), Gaps = 15/99 (15%)
Query: 126 SNVLLASIENMQYAVTLD------VLHMVFSAFGPVQKIAMFDKN-------GGLQALIQ 172
S LL S+ N QY V+ +++ +F +G VQKI + KN +QAL+Q
Sbjct: 162 SKTLLVSMFNTQYDVSAAAQITPMIVYQIFGNYGSVQKIVVLPKNESSQRNHNRVQALVQ 221
Query: 173 YPDVQTAVVAKEALEGH--CIYDGGFCKLHISYSRHTDL 209
+ TA K L+G I D L I +SR D+
Sbjct: 222 FDSKVTAENVKSILQGQPVTIGDTVTFTLDIQFSRMDDI 260
>gi|71423973|ref|XP_812637.1| RNA-binding protein [Trypanosoma cruzi strain CL Brener]
gi|70877443|gb|EAN90786.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 325
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 46/99 (46%), Gaps = 15/99 (15%)
Query: 126 SNVLLASIENMQYAVTLD------VLHMVFSAFGPVQKIAMFDKN-------GGLQALIQ 172
S LL S+ N QY V+ +++ +F +G VQKI + KN +QAL+Q
Sbjct: 162 SKTLLVSMFNTQYDVSAAAQITPMIVYQIFGNYGSVQKIVVLPKNESSQRNHNRVQALVQ 221
Query: 173 YPDVQTAVVAKEALEGH--CIYDGGFCKLHISYSRHTDL 209
+ TA K L+G I D L I +SR D+
Sbjct: 222 FDSKVTAENVKSILQGQPVTIGDTVTFTLDIQFSRMDDI 260
>gi|407405096|gb|EKF30263.1| RNA-binding protein, putative [Trypanosoma cruzi marinkellei]
Length = 336
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 46/99 (46%), Gaps = 15/99 (15%)
Query: 126 SNVLLASIENMQYAVTLD------VLHMVFSAFGPVQKIAMFDKN-------GGLQALIQ 172
S LL S+ N QY V+ +++ +F +G VQKI + KN +QAL+Q
Sbjct: 162 SKTLLVSMFNTQYDVSAAAQITPMIVYQIFGNYGSVQKIVVLPKNESSQRNHNRVQALVQ 221
Query: 173 YPDVQTAVVAKEALEGH--CIYDGGFCKLHISYSRHTDL 209
+ TA K L+G I D L I +SR D+
Sbjct: 222 FDSKVTAENVKSILQGQPVTIGDTVTFTLDIQFSRMDDI 260
>gi|340056209|emb|CCC50538.1| putative RNA-binding protein [Trypanosoma vivax Y486]
Length = 314
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 22/113 (19%)
Query: 126 SNVLLASIENMQYAVTLD------VLHMVFSAFGPVQKIAMFDKN-------GGLQALIQ 172
S LL S+ N QY V+ +++ +F+ +G VQKI + KN +QAL+Q
Sbjct: 166 SKTLLVSMFNTQYDVSAAAQINPMIVYQIFANYGAVQKIVVLPKNESSQRNHNRVQALVQ 225
Query: 173 YPDVQTAVVAKEALEGHCIYDGGFC--KLHISYSRHTD-------LSIKVNND 216
+ TA K L+G + G L I +SR D +S+ +N D
Sbjct: 226 FDSKATAENVKNILQGQPVTIGETVTFTLDIQFSRMDDIKTSNPAISLVINED 278
>gi|149050609|gb|EDM02782.1| heterogeneous nuclear ribonucleoprotein L-like (predicted), isoform
CRA_a [Rattus norvegicus]
Length = 261
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQAL 170
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA+
Sbjct: 215 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAM 258
>gi|431912753|gb|ELK14771.1| Heterogeneous nuclear ribonucleoprotein L-like protein [Pteropus
alecto]
Length = 484
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQAL 170
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA+
Sbjct: 166 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAM 209
>gi|2288985|gb|AAB64314.1| hypothetical protein [Arabidopsis thaliana]
Length = 1056
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 58/143 (40%), Gaps = 13/143 (9%)
Query: 144 VLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISY 203
+LH FG ++++ + AL+++ + A KE L+G + ++ I Y
Sbjct: 379 ILHNAMILFGEIERVKSYPSRNF--ALVEFRSAEEARQCKEGLQGRLFNNP---RIKIMY 433
Query: 204 S------RHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILG--QQPVPMVGATANQYNGAQ 255
S D S RSR + P S P G P+ G YNGA+
Sbjct: 434 SNDELPPEQDDTSFYSGMKRSRTDMFNNDPSFVSSPHSTGIPGSMRPLRGTNERSYNGAE 493
Query: 256 FAPPPPEQPMMHQPTAAGWGAVP 278
+ ++P +P+A G G +P
Sbjct: 494 YNDVVGKEPNWRRPSANGTGILP 516
>gi|61661314|gb|AAX51263.1| FPA [Arabidopsis thaliana]
Length = 1056
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 58/143 (40%), Gaps = 13/143 (9%)
Query: 144 VLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISY 203
+LH FG ++++ + AL+++ + A KE L+G + ++ I Y
Sbjct: 379 ILHNAMILFGEIERVKSYPSRNF--ALVEFRSAEEARQCKEGLQGRLFNNP---RIKIMY 433
Query: 204 S------RHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILG--QQPVPMVGATANQYNGAQ 255
S D S RSR + P S P G P+ G YNGA+
Sbjct: 434 SNDELPPEQDDTSFYSGMKRSRTDMFNNDPSFVSSPHSTGIPGSMRPLRGTNERSYNGAE 493
Query: 256 FAPPPPEQPMMHQPTAAGWGAVP 278
+ ++P +P+A G G +P
Sbjct: 494 YNDVVGKEPNWRRPSANGTGLLP 516
>gi|76157413|gb|AAX28348.2| SJCHGC04555 protein [Schistosoma japonicum]
Length = 304
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 147 MVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY--DGGFCKLHISYS 204
M F FG + ++ F KN A +++ + +A VAK + G ++ + F L +S
Sbjct: 177 MAFKPFGRILRVVSFKKNDSRHAFLEFSNSLSAHVAKLLMNGVPLFPMECNFHILRTEFS 236
Query: 205 RHTDLSIKVNNDRSRDY 221
R + L I ++ SRD+
Sbjct: 237 RQSTLEIHREDNSSRDF 253
>gi|145547070|ref|XP_001459217.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124427041|emb|CAK91820.1| unnamed protein product [Paramecium tetraurelia]
Length = 647
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 52/100 (52%), Gaps = 1/100 (1%)
Query: 124 PESNVLLASIENM-QYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVA 182
P +NV+L I N ++ D VFS FG +Q++ +F+++ + +++ + ++A+ A
Sbjct: 12 PRTNVILVVITNKANKTLSHDKYFKVFSPFGTIQRMLIFERSLTWKTFVEFDNPESALKA 71
Query: 183 KEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 222
+ + D +++ S+ T ++ + NN DYT
Sbjct: 72 RSQMNDKFFCDDNTLLMNVYASKLTYITFQENNTGGVDYT 111
>gi|426195143|gb|EKV45073.1| hypothetical protein AGABI2DRAFT_144580 [Agaricus bisporus var.
bisporus H97]
Length = 404
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 6/105 (5%)
Query: 103 APSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFD 162
A SA+ S L +G +P +L++ + ++ ++ T D L +F +GP++K+ +
Sbjct: 223 AQSALPGSTDLDLGSYATSADPTPTLLVSKLPSIIFSSTQD-LEPLFYPYGPLKKLRVIG 281
Query: 163 K--NGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSR 205
NG L L QY A AKEAL G + C++ + + R
Sbjct: 282 AGLNGTLSVLAQYSSSSAAQEAKEALHGQNYIN---CQVEVQFLR 323
>gi|222623816|gb|EEE57948.1| hypothetical protein OsJ_08670 [Oryza sativa Japonica Group]
Length = 353
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 128 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 187
VL ++ + Y VT +VLH V++ +G V + ++AL+ + A A+ A
Sbjct: 157 VLRVTVSQIIYPVTSEVLHQVYNTYGAVAVQVLAVSTWQVKALVSFMSSHDAERARSATH 216
Query: 188 GHCIYDGGFCKLHISY 203
G IYDGG C + + +
Sbjct: 217 GRDIYDGG-CLMDVQH 231
>gi|222423512|dbj|BAH19726.1| AT2G43410 [Arabidopsis thaliana]
Length = 901
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 58/143 (40%), Gaps = 13/143 (9%)
Query: 144 VLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISY 203
+LH FG ++++ + AL+++ + A KE L+G + ++ I Y
Sbjct: 224 ILHNAMILFGEIERVKSYPSRNF--ALVEFRSAEEARQCKEGLQGRLFNN---PRIKIMY 278
Query: 204 S------RHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILG--QQPVPMVGATANQYNGAQ 255
S D S RSR + P S P G P+ G YNGA+
Sbjct: 279 SNDGLPPEQDDTSFYSGMKRSRTDMFNNDPSFVSSPHSTGIPGSMRPLRGTNERSYNGAE 338
Query: 256 FAPPPPEQPMMHQPTAAGWGAVP 278
+ ++P +P+A G G +P
Sbjct: 339 YNDVVGKEPNWRRPSANGTGILP 361
>gi|20453185|gb|AAM19833.1| At2g43410/T1O24.15 [Arabidopsis thaliana]
gi|27764946|gb|AAO23594.1| At2g43410/T1O24.15 [Arabidopsis thaliana]
Length = 901
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 58/143 (40%), Gaps = 13/143 (9%)
Query: 144 VLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISY 203
+LH FG ++++ + AL+++ + A KE L+G + ++ I Y
Sbjct: 224 ILHNAMILFGEIERVKSYPSRNF--ALVEFRSAEEARQCKEGLQGRLFNN---PRIKIMY 278
Query: 204 S------RHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILG--QQPVPMVGATANQYNGAQ 255
S D S RSR + P S P G P+ G YNGA+
Sbjct: 279 SNDELPPEQDDTSFYSGMKRSRTDMFNNDPSFVSSPHSTGIPGSMRPLRGTNERSYNGAE 338
Query: 256 FAPPPPEQPMMHQPTAAGWGAVP 278
+ ++P +P+A G G +P
Sbjct: 339 YNDVVGKEPNWRRPSANGTGILP 361
>gi|47497054|dbj|BAD19106.1| unknown protein [Oryza sativa Japonica Group]
gi|47497776|dbj|BAD19876.1| unknown protein [Oryza sativa Japonica Group]
Length = 430
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 128 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 187
VL ++ + Y VT +VLH V++ +G V + ++AL+ + A A+ A
Sbjct: 56 VLRVTVSQIIYPVTSEVLHQVYNTYGAVAVQVLAVSTWQVKALVSFMSSHDAERARSATH 115
Query: 188 GHCIYDGGFCKLHISY 203
G IYDGG C + + +
Sbjct: 116 GRDIYDGG-CLMDVQH 130
>gi|145331109|ref|NP_001078046.1| Flowering time control protein FPA [Arabidopsis thaliana]
gi|145331111|ref|NP_001078047.1| Flowering time control protein FPA [Arabidopsis thaliana]
gi|145331113|ref|NP_001078048.1| Flowering time control protein FPA [Arabidopsis thaliana]
gi|290463421|sp|Q8LPQ9.2|FPA_ARATH RecName: Full=Flowering time control protein FPA
gi|330255169|gb|AEC10263.1| Flowering time control protein FPA [Arabidopsis thaliana]
gi|330255170|gb|AEC10264.1| Flowering time control protein FPA [Arabidopsis thaliana]
gi|330255171|gb|AEC10265.1| Flowering time control protein FPA [Arabidopsis thaliana]
Length = 901
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 58/143 (40%), Gaps = 13/143 (9%)
Query: 144 VLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISY 203
+LH FG ++++ + AL+++ + A KE L+G + ++ I Y
Sbjct: 224 ILHNAMILFGEIERVKSYPSRNF--ALVEFRSAEEARQCKEGLQGRLFNN---PRIKIMY 278
Query: 204 S------RHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILG--QQPVPMVGATANQYNGAQ 255
S D S RSR + P S P G P+ G YNGA+
Sbjct: 279 SNDELPPEQDDTSFYSGMKRSRTDMFNNDPSFVSSPHSTGIPGSMRPLRGTNERSYNGAE 338
Query: 256 FAPPPPEQPMMHQPTAAGWGAVP 278
+ ++P +P+A G G +P
Sbjct: 339 YNDVVGKEPNWRRPSANGTGILP 361
>gi|125535222|gb|EAY81770.1| hypothetical protein OsI_36944 [Oryza sativa Indica Group]
Length = 1325
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 128 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 187
VL ++ + Y VT +VLH V+ +G V + ++AL+ + A A+ A
Sbjct: 781 VLRVTVSQIIYPVTSEVLHQVYDTYGAVAVQVLAVSTWQVKALVSFMSSHDAERARSATH 840
Query: 188 GHCIYDGGFCKLHISY 203
G IYDGG C L + +
Sbjct: 841 GRDIYDGG-CLLDVQH 855
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 128 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 187
VL ++ + Y VT +VLH V+ +G V + ++AL+ + A+ A
Sbjct: 42 VLRVTVSQIIYPVTSEVLHQVYDTYGAVAVQVLAVSTWQVKALVSFMSSHDVERARSATH 101
Query: 188 GHCIYDGGFCKLHISY 203
G IYDGG C L + +
Sbjct: 102 GRDIYDGG-CLLDVQH 116
>gi|358341535|dbj|GAA29842.2| polypyrimidine tract-binding protein 1, partial [Clonorchis
sinensis]
Length = 520
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 17/103 (16%)
Query: 144 VLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAK------------EALEGHCI 191
+LH +F +G + +I F KN LI++ + A VA + L G I
Sbjct: 88 ILHKIFYRYGKILRIITFPKNNQYHGLIEFENHIHAFVAMLVSVGLTKRHSPKHLNGQNI 147
Query: 192 YDGGFCKLHISYSRHTD-LSIKVNNDRSRDYT---LPSTPMVN 230
Y G C L + +S++ L ++ +D+ RDY L +VN
Sbjct: 148 YTGC-CSLLVEFSKNRGPLEVRHESDKCRDYINNPLTEEELVN 189
>gi|317142939|ref|XP_001819205.2| pre-mRNA branch site p14-like protein [Aspergillus oryzae RIB40]
Length = 146
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 120 KKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAM-FDKNGGLQALIQYPDVQT 178
+KL PE+N +L ++N+ Y VT + L +F FGP+++I N A + Y DV
Sbjct: 36 RKLAPEANRILF-VKNLNYNVTAEQLFDLFGKFGPIRQIRQGIANNSKGTAFVVYEDVHD 94
Query: 179 AVVAKEALEG 188
A A + L G
Sbjct: 95 AKQACDKLNG 104
>gi|440803034|gb|ELR23948.1| RNA recognition domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 440
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 133 IENMQYAVTLDVLHMVFSAFGPVQKIAMFD--KNGGLQ--ALIQYPDVQTAVVAKEALEG 188
I N+ + T L V S FG V+++ F+ +NG + AL++Y D + + AKE L+G
Sbjct: 62 IGNLTWWTTDQDLEDVCSQFGKVKQVKFFENKQNGRSKGYALVEYYDAEASRQAKEKLQG 121
Query: 189 HCIYD 193
+ I+D
Sbjct: 122 YTIHD 126
>gi|297600029|ref|NP_001048354.2| Os02g0789700 [Oryza sativa Japonica Group]
gi|255671306|dbj|BAF10268.2| Os02g0789700, partial [Oryza sativa Japonica Group]
Length = 451
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 128 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 187
VL ++ + Y VT +VLH V++ +G V + ++AL+ + A A+ A
Sbjct: 77 VLRVTVSQIIYPVTSEVLHQVYNTYGAVAVQVLAVSTWQVKALVSFMSSHDAERARSATH 136
Query: 188 GHCIYDGGFCKLHISY 203
G IYDGG C + + +
Sbjct: 137 GRDIYDGG-CLMDVQH 151
>gi|452001712|gb|EMD94171.1| hypothetical protein COCHEDRAFT_1020240 [Cochliobolus
heterostrophus C5]
Length = 325
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 7/78 (8%)
Query: 120 KKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQ---ALIQYPDV 176
K +EP NVL I N+ Y VT D L VFS FG ++ + M N GL A ++Y +V
Sbjct: 130 KNIEPH-NVLY--IGNLYYEVTPDQLKRVFSRFGDIESVRMVYDNRGLSRGFAYVEYKNV 186
Query: 177 QTAVVAKEALEGHCIYDG 194
A A + L+ +++G
Sbjct: 187 SDAQAAIDNLDMQ-VFEG 203
>gi|67900938|ref|XP_680725.1| hypothetical protein AN7456.2 [Aspergillus nidulans FGSC A4]
gi|40742846|gb|EAA62036.1| hypothetical protein AN7456.2 [Aspergillus nidulans FGSC A4]
gi|259483762|tpe|CBF79417.1| TPA: pre-mRNA branch site protein p14, putative (AFU_orthologue;
AFUA_2G05960) [Aspergillus nidulans FGSC A4]
Length = 172
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAM-FDKNGGLQALIQYPDVQ 177
+KL PE+N +L ++N+ Y VT + L +F FGP+++I N A + Y DV
Sbjct: 61 SRKLAPEANRILF-VKNLNYNVTAEQLFDLFGKFGPIRQIRQGIANNSKGTAFVVYEDVH 119
Query: 178 TAVVAKEALEG 188
A A + L G
Sbjct: 120 DAKQACDKLNG 130
>gi|321258093|ref|XP_003193811.1| puf protein [Cryptococcus gattii WM276]
gi|317460281|gb|ADV22024.1| Puf protein, putative [Cryptococcus gattii WM276]
Length = 1236
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 67/140 (47%), Gaps = 24/140 (17%)
Query: 13 ILQVFSAFGFVHKITTFE-KTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPC 71
+LQ+FS FG V + K GF V F ++A SA+NAL+GR I L ++GP
Sbjct: 559 LLQIFSPFGPVESSRVLQNKCCGF---VNFERLDSAVSARNALNGRDI----LGSDVGP- 610
Query: 72 TLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLD------GKKLEPE 125
+RI ++ S + +P LP +PS D+ +L V L+ E +
Sbjct: 611 -IRIGFARVPTRSPTIST------AHPGLPASPS--DSPTKLGVALNTVLGAASVSTEQQ 661
Query: 126 SNVLLASIENMQYAVTLDVL 145
+V +EN + + LD++
Sbjct: 662 MSVEGGGLENYRSPLVLDLV 681
>gi|383856703|ref|XP_003703847.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like
[Megachile rotundata]
Length = 421
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 173 YPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 225
+ V++A AKE L G IY G C L I +++ T L++ N+ S DYT P+
Sbjct: 31 FDSVESATRAKETLHGADIY-SGCCTLKIDFAKPTKLNVYKNDAESWDYTTPT 82
Score = 38.5 bits (88), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 7/72 (9%)
Query: 41 FSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 100
F E+A+ AK L G I G CTL+I ++ T L+V S DYT P L
Sbjct: 31 FDSVESATRAKETLHGADI-------YSGCCTLKIDFAKPTKLNVYKNDAESWDYTTPTL 83
Query: 101 PVAPSAIDASGQ 112
+ DA+G
Sbjct: 84 GSSAHKNDATGN 95
>gi|241631201|ref|XP_002410244.1| heterogeneous nuclear ribonucleoprotein L, putative [Ixodes
scapularis]
gi|215503358|gb|EEC12852.1| heterogeneous nuclear ribonucleoprotein L, putative [Ixodes
scapularis]
Length = 97
Score = 41.6 bits (96), Expect = 0.53, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALI 171
G++ E ++VLL +I N Y +T+DV+H + + G V +I +F KN G+QA++
Sbjct: 27 GQEEEKPNHVLLMTILNPAYPITVDVIHTISTPSGKVMRIVIFKKN-GVQAMV 78
>gi|145529570|ref|XP_001450568.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124418190|emb|CAK83171.1| unnamed protein product [Paramecium tetraurelia]
Length = 600
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 54/100 (54%), Gaps = 3/100 (3%)
Query: 126 SNVLLASIENMQYAVTL--DVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAK 183
+NV+L I N + TL D VFS FG +Q++ +F+++ + +++ + ++A+ A+
Sbjct: 6 TNVILVVITN-KANKTLGHDKYFKVFSQFGTIQRMLIFERSLTWKTFVEFDNPESAIKAR 64
Query: 184 EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTL 223
+ + D +++ S+ T ++ + NN DYTL
Sbjct: 65 QVMNDKPFCDDSQLMMNVYASKLTYITFQENNTGGVDYTL 104
>gi|317028095|ref|XP_001400564.2| pre-mRNA branch site p14-like protein [Aspergillus niger CBS
513.88]
Length = 122
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 120 KKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAM-FDKNGGLQALIQYPDVQT 178
+KL PE+N +L ++N+ Y VT + L +F FGP+++I N A + Y DV
Sbjct: 12 RKLAPEANRILF-VKNLNYNVTAEQLFDLFGKFGPIRQIRQGIANNSKGTAFVVYEDVHD 70
Query: 179 AVVAKEALEG 188
A A + L G
Sbjct: 71 AKQACDKLNG 80
>gi|258574487|ref|XP_002541425.1| pre-mRNA branch site protein p14 [Uncinocarpus reesii 1704]
gi|237901691|gb|EEP76092.1| pre-mRNA branch site protein p14 [Uncinocarpus reesii 1704]
Length = 115
Score = 41.2 bits (95), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 121 KLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAM-FDKNGGLQALIQYPDVQTA 179
KL PE+N +L ++N+ Y VT D L +F FGP+++I N A + Y DV A
Sbjct: 6 KLAPEANRILF-VKNLSYNVTADELFDLFGKFGPIRQIRQGIAANSKGTAFVVYEDVHDA 64
Query: 180 VVAKEALEG 188
A + L G
Sbjct: 65 KQACDKLNG 73
>gi|145482375|ref|XP_001427210.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124394290|emb|CAK59812.1| unnamed protein product [Paramecium tetraurelia]
Length = 655
Score = 41.2 bits (95), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 51/100 (51%), Gaps = 1/100 (1%)
Query: 124 PESNVLLASIENM-QYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVA 182
P +NV+L I N ++ D VFS FG +Q++ +F+++ + +++ + +A+ A
Sbjct: 12 PRTNVILVVITNKANKTLSHDKYFKVFSPFGTIQRMLIFERSLTWKTFVEFDNPDSALKA 71
Query: 183 KEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 222
+ + D +++ S+ T ++ + NN DYT
Sbjct: 72 RSQMNDKFFCDDNTLLMNVYASKLTYITFQENNTGGVDYT 111
>gi|148222234|ref|NP_001080089.1| U1 small nuclear ribonucleoprotein A [Xenopus laevis]
gi|27924189|gb|AAH44979.1| Snf protein [Xenopus laevis]
Length = 282
Score = 41.2 bits (95), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 82/215 (38%), Gaps = 54/215 (25%)
Query: 120 KKLEPESNVLLASI-ENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGL--QALIQYPDV 176
+++ P + + + ++ E ++ L+ +FS FG + I + +N + QA + + +
Sbjct: 4 QEVRPNNTIYINNLNEKIKKDELKKSLYAIFSQFGQILDI-LVSRNLKMRGQAFVIFKET 62
Query: 177 QTAVVAKEALEGHCIYDGGFCKLHISYSR-HTDLSIK-----VNNDRSRDYTLPSTPMVN 230
+A A +++G YD + I YS+ +D+ K V DR R
Sbjct: 63 SSATNALRSMQGFPFYD---KPMRIQYSKTDSDIIAKMKGTFVERDRKRQEKRKVK---- 115
Query: 231 SQPSILGQQPVPMVGATANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMPMMGNH 290
VP V N GA P P Q A Q+MP M
Sbjct: 116 ----------VPEVQGVKNAMPGAALLPGVPGQM--------------AAMQNMPGMTQA 151
Query: 291 PYMPPGSMPMGPGMMQMHMPGQSGMQHHHGAMPPP 325
P M MHM GQ+ HH G MPPP
Sbjct: 152 PRM-------------MHMAGQAPYMHHPGMMPPP 173
>gi|218191477|gb|EEC73904.1| hypothetical protein OsI_08733 [Oryza sativa Indica Group]
Length = 219
Score = 41.2 bits (95), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 128 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 187
VL ++ + Y VT +VLH V+ +G V + ++AL+ + A+ A
Sbjct: 42 VLRVTVSQIIYPVTYEVLHQVYDTYGAVAVQVLAVSTWQVKALVSFMSSHDVERARSATH 101
Query: 188 GHCIYDGGFCKLHISY 203
G IYDGG C L + +
Sbjct: 102 GRDIYDGG-CLLDVQH 116
>gi|119193232|ref|XP_001247222.1| conserved hypothetical protein [Coccidioides immitis RS]
gi|320040131|gb|EFW22065.1| pre-mRNA branch site protein p14 [Coccidioides posadasii str.
Silveira]
gi|392863538|gb|EAS35707.2| pre-mRNA branch site protein p14 [Coccidioides immitis RS]
Length = 115
Score = 41.2 bits (95), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 121 KLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAM-FDKNGGLQALIQYPDVQTA 179
KL PE+N +L ++N+ Y VT D L +F FGP+++I N A + Y DV A
Sbjct: 6 KLAPEANRILF-VKNLSYNVTADDLFDLFGKFGPIRQIRQGIAANSKGTAFVVYEDVHDA 64
Query: 180 VVAKEALEG 188
A + L G
Sbjct: 65 KQACDKLNG 73
>gi|118381836|ref|XP_001024078.1| polypyrimidine tract binding protein, putative [Tetrahymena
thermophila]
gi|89305845|gb|EAS03833.1| polypyrimidine tract binding protein, putative [Tetrahymena
thermophila SB210]
Length = 1213
Score = 41.2 bits (95), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 53/115 (46%), Gaps = 11/115 (9%)
Query: 103 APSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTL-DVLHMVFSAFGPVQKIAMF 161
+ S ID QLS G+ K VLL ++N Q V ++ FS FG V++I +F
Sbjct: 209 SSSKID---QLSKGIRPSK------VLLVMVQNPQDEVIEHRIIFEKFSFFGEVEQILIF 259
Query: 162 DKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGF-CKLHISYSRHTDLSIKVNN 215
K + + ++ A+ AK ALE I K+ + +S +L +K N
Sbjct: 260 SKKQPWKLFVDMNSIEVAIKAKNALENSSICVNNLELKMKVQFSSQQNLVLKNGN 314
>gi|350635238|gb|EHA23600.1| hypothetical protein ASPNIDRAFT_138217 [Aspergillus niger ATCC
1015]
Length = 112
Score = 41.2 bits (95), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 120 KKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAM-FDKNGGLQALIQYPDVQT 178
+KL PE+N +L ++N+ Y VT + L +F FGP+++I N A + Y DV
Sbjct: 4 RKLAPEANRILF-VKNLNYNVTAEQLFDLFGKFGPIRQIRQGIANNSKGTAFVVYEDVHD 62
Query: 179 AVVAKEALEG 188
A A + L G
Sbjct: 63 AKQACDKLNG 72
>gi|1173326|sp|P45429.1|SNRPA_XENLA RecName: Full=U1 small nuclear ribonucleoprotein A; Short=U1 snRNP
A; Short=U1-A; Short=U1A
gi|65181|emb|CAA41021.1| U1 A protein [Xenopus laevis]
Length = 282
Score = 40.8 bits (94), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 81/215 (37%), Gaps = 54/215 (25%)
Query: 120 KKLEPESNVLLASI-ENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGL--QALIQYPDV 176
+++ P + + + ++ E ++ L+ +FS FG + I + +N + QA + + +
Sbjct: 4 QEVRPNNTIYINNLNEKIKKDELKKSLYAIFSQFGQILDI-LVSRNLKMRGQAFVIFKET 62
Query: 177 QTAVVAKEALEGHCIYDGGFCKLHISYSR-HTDLSIK-----VNNDRSRDYTLPSTPMVN 230
+A A +++G YD + I YS+ +D+ K V DR R
Sbjct: 63 SSATNALRSMQGFPFYD---KPMRIQYSKTDSDIIAKMKGTFVERDRKRQEKRKVK---- 115
Query: 231 SQPSILGQQPVPMVGATANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMPMMGNH 290
VP V N GA P P Q A Q MP M
Sbjct: 116 ----------VPEVQGVKNAMPGAALLPGVPGQM--------------AAMQDMPGMTQA 151
Query: 291 PYMPPGSMPMGPGMMQMHMPGQSGMQHHHGAMPPP 325
P M MHM GQ+ HH G MPPP
Sbjct: 152 PRM-------------MHMAGQAPYMHHPGMMPPP 173
>gi|115400751|ref|XP_001215964.1| pre-mRNA branch site protein p14 [Aspergillus terreus NIH2624]
gi|119480377|ref|XP_001260217.1| pre-mRNA branch site protein p14, putative [Neosartorya fischeri
NRRL 181]
gi|114191630|gb|EAU33330.1| pre-mRNA branch site protein p14 [Aspergillus terreus NIH2624]
gi|119408371|gb|EAW18320.1| pre-mRNA branch site protein p14, putative [Neosartorya fischeri
NRRL 181]
gi|134057510|emb|CAK48864.1| unnamed protein product [Aspergillus niger]
gi|358367610|dbj|GAA84228.1| pre-mRNA branch site protein p14 [Aspergillus kawachii IFO 4308]
Length = 113
Score = 40.8 bits (94), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 120 KKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAM-FDKNGGLQALIQYPDVQT 178
+KL PE+N +L ++N+ Y VT + L +F FGP+++I N A + Y DV
Sbjct: 3 RKLAPEANRILF-VKNLNYNVTAEQLFDLFGKFGPIRQIRQGIANNSKGTAFVVYEDVHD 61
Query: 179 AVVAKEALEG 188
A A + L G
Sbjct: 62 AKQACDKLNG 71
>gi|440300872|gb|ELP93319.1| hypothetical protein EIN_057040 [Entamoeba invadens IP1]
Length = 373
Score = 40.8 bits (94), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 75/179 (41%), Gaps = 16/179 (8%)
Query: 13 ILQVFSAFGFVHKITTFEKTAG--FQALVQFSDTETASSAKNALDGRSIPRYLLPENMGP 70
I FG +++I + Q+LV+F+D T A L +P +
Sbjct: 23 IYDAMVTFGPINRIIRMNSNSSEQVQSLVEFTDRMTCEKAIEYLKVNPLP-------VLK 75
Query: 71 CTLRITYSAHTDLSVKFQSHRSRDY-TNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVL 129
CT+R T L++ + +RDY TNP P P AS Q S + E ++ VL
Sbjct: 76 CTVRAEIGNATRLNIHTDTAHARDYTTNPRYPSEPKT--ASRQ-STNRNINMEEYKTKVL 132
Query: 130 LA-SIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 187
+ + T L+ +FS FG + K+ + A++++ Q A A E LE
Sbjct: 133 MVHDLPKNLVPETAYHLYNMFSLFGSISKVNVLSSKDT--AMVEFETYQQAHKALEILE 189
>gi|121715254|ref|XP_001275236.1| pre-mRNA branch site protein p14, putative [Aspergillus clavatus
NRRL 1]
gi|238501940|ref|XP_002382204.1| hypothetical protein AFLA_130110 [Aspergillus flavus NRRL3357]
gi|83767063|dbj|BAE57203.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|119403393|gb|EAW13810.1| pre-mRNA branch site protein p14, putative [Aspergillus clavatus
NRRL 1]
gi|220692441|gb|EED48788.1| hypothetical protein AFLA_130110 [Aspergillus flavus NRRL3357]
gi|391863731|gb|EIT73031.1| putative RNA-binding protein [Aspergillus oryzae 3.042]
Length = 113
Score = 40.8 bits (94), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 120 KKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAM-FDKNGGLQALIQYPDVQT 178
+KL PE+N +L ++N+ Y VT + L +F FGP+++I N A + Y DV
Sbjct: 3 RKLAPEANRILF-VKNLNYNVTAEQLFDLFGKFGPIRQIRQGIANNSKGTAFVVYEDVHD 61
Query: 179 AVVAKEALEG 188
A A + L G
Sbjct: 62 AKQACDKLNG 71
>gi|297828039|ref|XP_002881902.1| hypothetical protein ARALYDRAFT_483451 [Arabidopsis lyrata subsp.
lyrata]
gi|297327741|gb|EFH58161.1| hypothetical protein ARALYDRAFT_483451 [Arabidopsis lyrata subsp.
lyrata]
Length = 902
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 69/323 (21%), Positives = 124/323 (38%), Gaps = 62/323 (19%)
Query: 13 ILQVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCT 72
+ + FS FG + + A + + + + A AK +++G+ MG
Sbjct: 111 LEEEFSKFGKIEDFRFLRERK--TAFIDYYEMDDALQAK-SMNGK---------RMGGSF 158
Query: 73 LRITYSAHTDLSVKFQ---SHRSRDYTNPYLPVAPSAIDASGQLSVGLDGK-KLEPESNV 128
LR+ + + K Q S+ +R+ + P P + D DGK ++P +
Sbjct: 159 LRVDF-LRSQAPRKEQWAGSYDNRNGNMNHKPQHPHSYD---------DGKGDVQPSKVL 208
Query: 129 LLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEG 188
+ N +LH +G +++I + + +L+++ + A AKE ++G
Sbjct: 209 WIGYPPNATQCNDEQMLHNAMILYGEIERIKCYPSSHF--SLVEFRSAEEARHAKEGIQG 266
Query: 189 HCIYDGGFCKLHISYSRHT------DLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ---- 238
+ ++ I YS D S RSR T M N+ PS +
Sbjct: 267 RLFNN---PRIKIMYSNDELPPEPDDTSFYSGMKRSR------TDMFNNDPSFISSPHST 317
Query: 239 ----QPVPMVGATANQYNGAQFAPPPPEQPMMHQPTAAGWGAVP----PASQSMPMMG-N 289
P+ G+ YNG+++ ++P +P+A G G +P P P G
Sbjct: 318 GIPGSMRPLRGSNERSYNGSEYNDVVGKEPNWRRPSANGTGILPSPTGPGILPSPAQGMR 377
Query: 290 HPYMPPGSMPMGPGMMQMHMPGQ 312
HP M PG + + P Q
Sbjct: 378 HP------MRSNPGSWEEYDPAQ 394
>gi|409076329|gb|EKM76701.1| hypothetical protein AGABI1DRAFT_130995 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 404
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 6/105 (5%)
Query: 103 APSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFD 162
A SA S L +G +P +L++ + ++ ++ T D L +F +GP++K+ +
Sbjct: 223 AQSARPGSTDLDLGSYATSADPTPTLLVSKLPSIIFSSTQD-LEPLFYPYGPLKKLRVIG 281
Query: 163 K--NGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSR 205
NG L L QY A AKEAL G + C++ + + R
Sbjct: 282 AGLNGTLSVLAQYSSSSAAQEAKEALHGQNYIN---CQVEVQFLR 323
>gi|77553984|gb|ABA96780.1| hypothetical protein LOC_Os12g12190 [Oryza sativa Japonica Group]
Length = 800
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 128 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 187
VL ++ + Y VT +VLH V+ +G V + ++AL+ + A A+
Sbjct: 63 VLCVTVSQIIYPVTSEVLHQVYDTYGAVAVQVLAVSTWQVKALVSFMSSHDAERARSTTH 122
Query: 188 GHCIYDGGFCKLHISY 203
GH IYD G C L + +
Sbjct: 123 GHDIYDEG-CLLDMQH 137
>gi|297728967|ref|NP_001176847.1| Os12g0223500 [Oryza sativa Japonica Group]
gi|222616825|gb|EEE52957.1| hypothetical protein OsJ_35600 [Oryza sativa Japonica Group]
gi|255670154|dbj|BAH95575.1| Os12g0223500 [Oryza sativa Japonica Group]
Length = 297
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 128 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 187
VL ++ + Y VT +VLH V+ +G V + ++AL+ + A A+
Sbjct: 63 VLCVTVSQIIYPVTSEVLHQVYDTYGAVAVQVLAVSTWQVKALVSFMSSHDAERARSTTH 122
Query: 188 GHCIYDGGFCKLHISY 203
GH IYD G C L + +
Sbjct: 123 GHDIYDEG-CLLDMQH 137
>gi|115442121|ref|NP_001045340.1| Os01g0938200 [Oryza sativa Japonica Group]
gi|20160777|dbj|BAB89718.1| putative ribonucleoprotein [Oryza sativa Japonica Group]
gi|20161317|dbj|BAB90241.1| putative ribonucleoprotein [Oryza sativa Japonica Group]
gi|113534871|dbj|BAF07254.1| Os01g0938200 [Oryza sativa Japonica Group]
gi|215704529|dbj|BAG94162.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189701|gb|EEC72128.1| hypothetical protein OsI_05123 [Oryza sativa Indica Group]
gi|222619840|gb|EEE55972.1| hypothetical protein OsJ_04706 [Oryza sativa Japonica Group]
Length = 460
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 78/188 (41%), Gaps = 28/188 (14%)
Query: 140 VTLDVLHMVFSAFGPVQKIAMFDKNGGLQ------ALIQYPDVQTAVVAKEALEGHCIYD 193
VT L +FS +G ++ + + G Q A ++Y + AV A EAL G +
Sbjct: 139 VTDTELTDLFSKYGNIKDLQIL--RGSQQTSKAGCAFLKYETKEQAVAAIEALNGKHKIE 196
Query: 194 GGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATAN---- 249
G L + ++ D + +++ L S+ M ++ P Q + GA
Sbjct: 197 GSSVPLVVKWA---DTEKERQARKAQKAQLQSSNMPSASP----MQQSSLFGALQMGYMP 249
Query: 250 QYNGAQFAPPP-------PEQPMMHQPTAAGWGAVPPASQSMPMMGNHPYMPPGSMPMGP 302
QYNG + PP P PM +Q T V P +Q + G +P + P S+P
Sbjct: 250 QYNGFGYQPPGTYGLMQYPLSPMQNQATFPNM--VQPVNQGNSIRGVNPELSPNSVPRSF 307
Query: 303 GMMQMHMP 310
MQ+ P
Sbjct: 308 NAMQLSSP 315
>gi|354508326|ref|XP_003516204.1| PREDICTED: polypyrimidine tract-binding protein 1-like, partial
[Cricetulus griseus]
Length = 214
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 119 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKI 158
G + +S VL +EN+ Y VTLDVL+ +FS FG V KI
Sbjct: 173 GMAMAGQSPVLRVLVENLFYPVTLDVLNQIFSKFGTVVKI 212
>gi|307694571|gb|ADN84938.1| hephaestus [Biston betularia]
Length = 181
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 24/39 (61%)
Query: 126 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKN 164
+ VL IE+M Y + LDVL+ +F +G V KI F KN
Sbjct: 142 NTVLRVIIEHMLYPIVLDVLYSIFQRYGKVLKIVTFTKN 180
>gi|118368089|ref|XP_001017254.1| hypothetical protein TTHERM_00196000 [Tetrahymena thermophila]
gi|89299021|gb|EAR97009.1| hypothetical protein TTHERM_00196000 [Tetrahymena thermophila SB210]
Length = 1455
Score = 38.9 bits (89), Expect = 3.3, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 140 VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKL 199
VTL +L +FS FGP++KI M+ KN L++Y +++A AKE+L D ++
Sbjct: 1241 VTLKMLINIFSYFGPIEKI-MYLKNKS-SCLVEYTRIESASAAKESLNDMTFMDQ---EI 1295
Query: 200 HISYSRHTDLSIK 212
I YS + + IK
Sbjct: 1296 KIFYSNYDQIYIK 1308
>gi|328853841|gb|EGG02977.1| hypothetical protein MELLADRAFT_109765 [Melampsora larici-populina
98AG31]
Length = 300
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 30/68 (44%), Gaps = 6/68 (8%)
Query: 212 KVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQYNGAQFAPPP------PEQPM 265
K+ N RD T + P V SQ S L Q P A +Y G Q PPP P QP
Sbjct: 46 KIPNRFWRDPTTTTIPAVKSQSSELAQPAAPQATTPAGKYQGIQLPPPPTLQATTPSQPS 105
Query: 266 MHQPTAAG 273
+ QP G
Sbjct: 106 IPQPDTIG 113
>gi|407922123|gb|EKG15250.1| hypothetical protein MPH_07584 [Macrophomina phaseolina MS6]
Length = 589
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 49/107 (45%), Gaps = 5/107 (4%)
Query: 123 EPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVA 182
P N L + N+ + D L +FS +++ K G +++ DV A A
Sbjct: 396 NPPCNTLY--VGNLPIDTSEDELKAMFSKQRGYKRLCFRTKANGPMCFVEFEDVSFATKA 453
Query: 183 KEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMV 229
L GH +++ + +S+S++ + V N ++ + +P+TPM
Sbjct: 454 LNELYGHPLHNSVKGGIRLSFSKN---PLGVRNGQNNNSNIPATPMT 497
>gi|320166285|gb|EFW43184.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 683
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 140 VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKL 199
VT L FS GP++ F +NG A I++ D Q+A +A +L G + G +
Sbjct: 148 VTSSALTEFFSTVGPIKHCQQFSQNGNSFAFIEFGDHQSATLAVGSLNGALL---GGQPI 204
Query: 200 HISYSRH 206
+ +S H
Sbjct: 205 RVGWSHH 211
>gi|449484269|ref|XP_004156835.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Cucumis
sativus]
Length = 242
Score = 37.4 bits (85), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 85/194 (43%), Gaps = 26/194 (13%)
Query: 16 VFSAFGFVHKITTFE--KTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTL 73
VFS FG + ++ F+ K G QA V F + +A++A + G P Y P +
Sbjct: 38 VFSQFGKILEVLAFKTLKHKG-QAWVVFEEVSSATNALRQMQG--FPFYDKPMRIQYAKT 94
Query: 74 RITYSAHTDLSVKFQSHRSR------------DYTNPYLPVAPS---AIDASGQLSVGLD 118
+ A +D S + R R D + + P+ A A+ V
Sbjct: 95 KSDIIAKSDGSFVPREKRKRHEEKGRKKKEQHDANQAGMGLNPAFAGAYGATAHSQVPYS 154
Query: 119 GKKLEPES----NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYP 174
G + PE+ N +L ++N+ + T +L M+F + +++ M + G+ A ++Y
Sbjct: 155 GGVMVPEAPAPPNSILF-VQNLPHETTPMMLQMLFCQYPGFKEVRMVEAKPGI-AFVEYS 212
Query: 175 DVQTAVVAKEALEG 188
D + VA +AL+G
Sbjct: 213 DEVQSTVAMQALQG 226
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.133 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,581,024,047
Number of Sequences: 23463169
Number of extensions: 245168758
Number of successful extensions: 849300
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 774
Number of HSP's successfully gapped in prelim test: 3746
Number of HSP's that attempted gapping in prelim test: 829031
Number of HSP's gapped (non-prelim): 17951
length of query: 331
length of database: 8,064,228,071
effective HSP length: 143
effective length of query: 188
effective length of database: 9,003,962,200
effective search space: 1692744893600
effective search space used: 1692744893600
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 77 (34.3 bits)