BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020066
(331 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q38834|R13L4_ARATH Disease resistance RPP13-like protein 4 OS=Arabidopsis thaliana
GN=RPP13L4 PE=2 SV=2
Length = 852
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 87/222 (39%), Gaps = 32/222 (14%)
Query: 73 PMEVSNYKEVMRIRERLVRSMDSLKKIVA-----------GQDVESGDLSHRSAETELEG 121
P++ K + I ER+ + ++ G D S + + LEG
Sbjct: 106 PLQYKKSKRLQEINERITKIKSQVEPYFEFITPSNVGRDNGTDRWSSPVYDHTQVVGLEG 165
Query: 122 SVDSVKNALLR-DGSTVRFIHIVGVSGTEVTHIAHRVFMDDDIVSRFPRHIWFSVGKILD 180
+K L R + S + + VG+ G T IA VF D +I RF R IW SV +
Sbjct: 166 DKRKIKEWLFRSNDSQLLIMAFVGMGGLGKTTIAQEVFNDKEIEHRFERRIWVSVSQTFT 225
Query: 181 LSTVMNVI--------------TI--RCKEIPSSEMLLIALDGLCDLNDDNLANLRLLVT 224
+M I T+ + ++ + LI +D D+ D NL+ +
Sbjct: 226 EEQIMRSILRNLGDASVGDDIGTLLRKIQQYLLGKRYLIVMD---DVWDKNLSWWDKIYQ 282
Query: 225 NMDL-VGFYVLVTTQSRSVATMMKQTVPEAEHLIYFSESNSW 265
+ G V+VTT+S SVA ++ + S NSW
Sbjct: 283 GLPRGQGGSVIVTTRSESVAKRVQARDDKTHRPELLSPDNSW 324
>sp|Q7XBQ9|RGA2_SOLBU Disease resistance protein RGA2 OS=Solanum bulbocastanum GN=RGA2
PE=1 SV=1
Length = 970
Score = 38.5 bits (88), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 59/151 (39%), Gaps = 21/151 (13%)
Query: 133 DGSTVRFIHIVGVSGTEVTHIAHRVFMDDDIVSRFPRHIWFSVGKILDLSTVMNVIT--- 189
D + + I+G+ G T +A VF D + F IW V + D ++ I
Sbjct: 171 DAQHLSVLPILGMGGLGKTTLAQMVFNDQRVTEHFHSKIWICVSEDFDEKRLIKAIVESI 230
Query: 190 ---------------IRCKEIPSSEMLLIALDGLCDLNDDNLANLRLLVTNMDLVGFYVL 234
+ +E+ + + L+ LD + + + ANLR V + G VL
Sbjct: 231 EGRPLLGEMDLAPLQKKLQELLNGKRYLLVLDDVWNEDQQKWANLR-AVLKVGASGASVL 289
Query: 235 VTTQSRSVATMMKQTVPEAEHLIYFSESNSW 265
TT+ V ++M P L S+ + W
Sbjct: 290 TTTRLEKVGSIMGTLQP--YELSNLSQEDCW 318
>sp|Q7XA42|RGA1_SOLBU Putative disease resistance protein RGA1 OS=Solanum bulbocastanum
GN=RGA1 PE=2 SV=2
Length = 979
Score = 38.1 bits (87), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 52/257 (20%), Positives = 96/257 (37%), Gaps = 51/257 (19%)
Query: 44 RNVREDAIPNYLLTDLNGIASDVDGLIDA---------PMEVSNY-KEVMRIRERLVRSM 93
+ + + + N+L LN +VD ++D E Y +V+ R ++ + M
Sbjct: 51 KQLNDKPLENWL-QKLNAATYEVDDILDEYKTKATRFLQSEYGRYHPKVIPFRHKVGKRM 109
Query: 94 DSLKKIVAGQDVESGDLS------HRSAETELEGSV---------DSVKNALLR------ 132
D + K + E R A T GSV D K+ +++
Sbjct: 110 DQVMKKLNAIAEERKKFHLQEKIIERQAATRETGSVLTEPQVYGRDKEKDEIVKILINTA 169
Query: 133 -DGSTVRFIHIVGVSGTEVTHIAHRVFMDDDIVSRFPRHIWFSVGKILDLSTVMNVIT-- 189
D + + I+G+ G T ++ VF D + RF IW + + ++ I
Sbjct: 170 SDAQKLSVLPILGMGGLGKTTLSQMVFNDQRVTERFYPKIWICISDDFNEKRLIKAIVES 229
Query: 190 ---------------IRCKEIPSSEMLLIALDGLCDLNDDNLANLRLLVTNMDLVGFYVL 234
+ +E+ + + + LD + + + ANLR V + G +VL
Sbjct: 230 IEGKSLSDMDLAPLQKKLQELLNGKRYFLVLDDVWNEDQHKWANLR-AVLKVGASGAFVL 288
Query: 235 VTTQSRSVATMMKQTVP 251
TT+ V ++M P
Sbjct: 289 TTTRLEKVGSIMGTLQP 305
>sp|Q9LRR4|R13L1_ARATH Putative disease resistance RPP13-like protein 1 OS=Arabidopsis
thaliana GN=RPPL1 PE=3 SV=1
Length = 1054
Score = 37.4 bits (85), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 28/155 (18%)
Query: 133 DGSTVRFIHIVGVSGTEVTHIAHRVFMDDDIVSRFPRHIWFSVGKILDLSTV-------- 184
+G TV + IVG+ G T ++ ++ D + S F +W V + D+ +
Sbjct: 194 NGITV--VAIVGIGGVGKTTLSQLLYNDQHVRSYFGTKVWAHVSEEFDVFKITKKVYESV 251
Query: 185 ---------MNVITIRCKEIPSSEML--LIALDGLCDLNDDNLANLRLLVTNM--DLVGF 231
++V+ ++ KE + L L+ LD DL ++N A+ LL G
Sbjct: 252 TSRPCEFTDLDVLQVKLKERLTGTGLPFLLVLD---DLWNENFADWDLLRQPFIHAAQGS 308
Query: 232 YVLVTTQSRSVATMMKQTVPEAEHLIYFSESNSWS 266
+LVTT+S+ VA++M +L S+ + WS
Sbjct: 309 QILVTTRSQRVASIM--CAVHVHNLQPLSDGDCWS 341
>sp|Q9LRR5|DRL21_ARATH Putative disease resistance protein At3g14460 OS=Arabidopsis
thaliana GN=At3g14460 PE=3 SV=1
Length = 1424
Score = 35.4 bits (80), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 53/125 (42%), Gaps = 18/125 (14%)
Query: 140 IHIVGVSGTEVTHIAHRVFMDDDIVSRFPRHIWFSVGKILDLSTVMNVI----------- 188
I +VG+ G T + VF D + F +W S G ++ TV +
Sbjct: 196 ISVVGMPGVGKTTLTEIVFNDYRVTEHFEVKMWISAGINFNVFTVTKAVLQDITSSAVNT 255
Query: 189 ------TIRCKEIPSSEMLLIALDGLCDLNDDNLANLRLLVTNMDLVGFYVLVTTQSRSV 242
I+ K+ S + L+ LD +D + ++ T+ + G +++TT+S V
Sbjct: 256 EDLPSLQIQLKKTLSGKRFLLVLDDFWSESDSEWESFQVAFTDAE-EGSKIVLTTRSEIV 314
Query: 243 ATMMK 247
+T+ K
Sbjct: 315 STVAK 319
>sp|P58165|AT2B2_OREMO Plasma membrane calcium-transporting ATPase 2 (Fragment)
OS=Oreochromis mossambicus GN=atp2b2 PE=2 SV=1
Length = 1112
Score = 35.0 bits (79), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 24/112 (21%), Positives = 49/112 (43%), Gaps = 17/112 (15%)
Query: 143 VGVSGTEVTHIAHRVFMDDDIVSR------FPRHIWFSVGKILDLSTVMNVITIRCKEIP 196
+G++GT+V A + + DD S + R+++ S+ K L +NV+ +
Sbjct: 820 MGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAV------ 873
Query: 197 SSEMLLIALDGLCDLNDDNLANLRLLVTNMDLVGFYVLVTTQSRSVATMMKQ 248
++A G C D L +++L N+ + F L +++K+
Sbjct: 874 -----IVAFTGACITQDSPLKAVQMLWVNLIMDTFASLALATEPPTESLLKR 920
>sp|P11506|AT2B2_RAT Plasma membrane calcium-transporting ATPase 2 OS=Rattus norvegicus
GN=Atp2b2 PE=2 SV=2
Length = 1243
Score = 34.7 bits (78), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 47/110 (42%), Gaps = 17/110 (15%)
Query: 143 VGVSGTEVTHIAHRVFMDDDIVSR------FPRHIWFSVGKILDLSTVMNVITIRCKEIP 196
+G++GT+V A + + DD S + R+++ S+ K L +NV+ +
Sbjct: 837 MGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAV------ 890
Query: 197 SSEMLLIALDGLCDLNDDNLANLRLLVTNMDLVGFYVLVTTQSRSVATMM 246
++A G C D L +++L N+ + F L T++
Sbjct: 891 -----IVAFTGACITQDSPLKAVQMLWVNLIMDTFASLALATEPPTETLL 935
>sp|Q01814|AT2B2_HUMAN Plasma membrane calcium-transporting ATPase 2 OS=Homo sapiens
GN=ATP2B2 PE=1 SV=2
Length = 1243
Score = 34.7 bits (78), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 47/110 (42%), Gaps = 17/110 (15%)
Query: 143 VGVSGTEVTHIAHRVFMDDDIVSR------FPRHIWFSVGKILDLSTVMNVITIRCKEIP 196
+G++GT+V A + + DD S + R+++ S+ K L +NV+ +
Sbjct: 837 MGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAV------ 890
Query: 197 SSEMLLIALDGLCDLNDDNLANLRLLVTNMDLVGFYVLVTTQSRSVATMM 246
++A G C D L +++L N+ + F L T++
Sbjct: 891 -----IVAFTGACITQDSPLKAVQMLWVNLIMDTFASLALATEPPTETLL 935
>sp|Q9R0K7|AT2B2_MOUSE Plasma membrane calcium-transporting ATPase 2 OS=Mus musculus
GN=Atp2b2 PE=1 SV=2
Length = 1198
Score = 34.7 bits (78), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 47/110 (42%), Gaps = 17/110 (15%)
Query: 143 VGVSGTEVTHIAHRVFMDDDIVSR------FPRHIWFSVGKILDLSTVMNVITIRCKEIP 196
+G++GT+V A + + DD S + R+++ S+ K L +NV+ +
Sbjct: 792 MGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAV------ 845
Query: 197 SSEMLLIALDGLCDLNDDNLANLRLLVTNMDLVGFYVLVTTQSRSVATMM 246
++A G C D L +++L N+ + F L T++
Sbjct: 846 -----IVAFTGACITQDSPLKAVQMLWVNLIMDTFASLALATEPPTETLL 890
>sp|A8GAY0|SYC_SERP5 Cysteine--tRNA ligase OS=Serratia proteamaculans (strain 568)
GN=cysS PE=3 SV=1
Length = 461
Score = 34.7 bits (78), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 140 IHIVGVSGTEVTHIAH-RVFMDDDIVSRFPRHIWFSVGKILDLSTVMNVITIRCKE 194
+++ GV+ ++ HI H R F+ D+V+R+ R++ +S+ + +++ V + I R E
Sbjct: 25 MYVCGVTIYDLCHIGHGRTFVAFDVVARYLRYLGYSLNYVRNVTDVDDKIIRRATE 80
>sp|A5WEW9|SYC_PSYWF Cysteine--tRNA ligase OS=Psychrobacter sp. (strain PRwf-1) GN=cysS
PE=3 SV=1
Length = 505
Score = 33.9 bits (76), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 140 IHIVGVSGTEVTHIAH-RVFMDDDIVSRFPRHIWFSVGKILDLSTVMNVITIRCKE 194
+++ G++ + HI H RV + D+VSR+ RH+ + V + +++ + + I R E
Sbjct: 48 MYVCGMTVYDYCHIGHARVMVAFDVVSRWLRHLGYEVNYVRNITDIDDKIIARANE 103
>sp|P23634|AT2B4_HUMAN Plasma membrane calcium-transporting ATPase 4 OS=Homo sapiens
GN=ATP2B4 PE=1 SV=2
Length = 1241
Score = 33.9 bits (76), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/112 (20%), Positives = 49/112 (43%), Gaps = 17/112 (15%)
Query: 143 VGVSGTEVTHIAHRVFMDDDIVSR------FPRHIWFSVGKILDLSTVMNVITIRCKEIP 196
+G++GT+V A + + DD + + R+++ S+ K L +NV+ +
Sbjct: 802 MGIAGTDVAKEASDIILTDDNFTSIVKAVMWGRNVYDSISKFLQFQLTVNVVAV------ 855
Query: 197 SSEMLLIALDGLCDLNDDNLANLRLLVTNMDLVGFYVLVTTQSRSVATMMKQ 248
++A G C D L +++L N+ + F L +++K+
Sbjct: 856 -----IVAFTGACITQDSPLKAVQMLWVNLIMDTFASLALATEPPTESLLKR 902
>sp|Q7XA39|RGA4_SOLBU Putative disease resistance protein RGA4 OS=Solanum bulbocastanum
GN=RGA4 PE=2 SV=1
Length = 988
Score = 33.5 bits (75), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 53/127 (41%), Gaps = 18/127 (14%)
Query: 142 IVGVSGTEVTHIAHRVFMDDDIVSRFPRHIWFSVGKILDLSTVMNVI------------- 188
I+G+ G T +A +F D+ + F IW V D ++ I
Sbjct: 182 IIGMGGLGKTTLAQMIFNDERVTKHFNPKIWVCVSDDFDEKRLIKTIIGNIERSSPHVED 241
Query: 189 ----TIRCKEIPSSEMLLIALDGLCDLNDDNLANLRLLVTNMDLVGFYVLVTTQSRSVAT 244
+ +E+ + + L+ LD + + + + A LR ++T + G +L TT+ V +
Sbjct: 242 LASFQKKLQELLNGKRYLLVLDDVWNDDLEKWAKLRAVLT-VGARGASILATTRLEKVGS 300
Query: 245 MMKQTVP 251
+M P
Sbjct: 301 IMGTLQP 307
>sp|Q8W3K0|DRL9_ARATH Probable disease resistance protein At1g58602 OS=Arabidopsis
thaliana GN=At1g58602 PE=2 SV=1
Length = 1138
Score = 33.5 bits (75), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 68/159 (42%), Gaps = 16/159 (10%)
Query: 31 NLRVSLRKLHNLLRNVREDAIP-NYLLTDLNGIASDVDGLIDAPMEVSNYKEVMRIRERL 89
+R +++L ++ + RE A+ ++ + + D+ M V +Y +R RER
Sbjct: 90 GIRKHIKRLTCIVPDRREIALYIGHVSKRITRVIRDMQSFGVQQMIVDDYMHPLRNRERE 149
Query: 90 VRSMDSLKKIVAGQDVESGDLSHRSAETELEGSVDSVKNALLRDGSTVRFIHIVGVSGTE 149
+R +D ESG ++ LE +V + + + + + I G+ G
Sbjct: 150 IRR-------TFPKDNESGFVA-------LEENVKKLVGYFVEE-DNYQVVSITGMGGLG 194
Query: 150 VTHIAHRVFMDDDIVSRFPRHIWFSVGKILDLSTVMNVI 188
T +A +VF D + +F + W SV + L V I
Sbjct: 195 KTTLARQVFNHDMVTKKFDKLAWVSVSQDFTLKNVWQNI 233
>sp|A4W7I4|SYC_ENT38 Cysteine--tRNA ligase OS=Enterobacter sp. (strain 638) GN=cysS PE=3
SV=2
Length = 461
Score = 33.5 bits (75), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 43/87 (49%), Gaps = 8/87 (9%)
Query: 125 SVKNALLRDGSTVRFIH-------IVGVSGTEVTHIAH-RVFMDDDIVSRFPRHIWFSVG 176
+ N L R + IH + G++ ++ HI H R F+ D+VSR+ R + +++
Sbjct: 3 KIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVSRYLRFLGYTLK 62
Query: 177 KILDLSTVMNVITIRCKEIPSSEMLLI 203
+ +++ + + I R E S + L+
Sbjct: 63 YVRNITDIDDKIIKRANENGESFVALV 89
>sp|Q9FJB5|RP8L3_ARATH Disease resistance RPP8-like protein 3 OS=Arabidopsis thaliana
GN=RPP8L3 PE=2 SV=1
Length = 901
Score = 33.5 bits (75), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 61/127 (48%), Gaps = 8/127 (6%)
Query: 55 LLTDLNGIASDVDGLIDAPMEVSNYKEVMRIRERLVRSMDSLKKIVAGQDV--ESGDLSH 112
LTD + +ASD++G+ +V + + I+++++ SL + QD+ E
Sbjct: 101 FLTDRHKVASDIEGITKRISKVIGEMQSLGIQQQIIDGGRSL----SLQDIQREIRQTFP 156
Query: 113 RSAETELEGSVDSVKNAL--LRDGSTVRFIHIVGVSGTEVTHIAHRVFMDDDIVSRFPRH 170
S+E++L G SV+ + + + ++ + I G+ G T +A ++F D + F
Sbjct: 157 NSSESDLVGVEQSVEELVGPMVEIDNIQVVSISGMGGIGKTTLARQIFHHDLVRRHFDGF 216
Query: 171 IWFSVGK 177
W V +
Sbjct: 217 AWVCVSQ 223
>sp|Q9FJK8|RP8L4_ARATH Probable disease resistance RPP8-like protein 4 OS=Arabidopsis
thaliana GN=RPP8L4 PE=2 SV=1
Length = 908
Score = 33.1 bits (74), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 62/138 (44%), Gaps = 6/138 (4%)
Query: 55 LLTDLNGIASDVDGLIDAPMEVSNYKEVMRIRERL--VRSMDSLKKIVAGQDVESGDLSH 112
LTD + +ASD++G+ +V + I++ + VRS+ ++ +++
Sbjct: 101 FLTDRHKVASDIEGITKRISDVIGEMQSFGIQQIIDGVRSLSLQERQRVQREIRQ--TYP 158
Query: 113 RSAETELEGSVDSVKNAL--LRDGSTVRFIHIVGVSGTEVTHIAHRVFMDDDIVSRFPRH 170
S+E++L G SV+ + L + + + I G+ G T +A +VF D + F
Sbjct: 159 DSSESDLVGVEQSVEELVGHLVENDIYQVVSIAGMGGIGKTTLARQVFHHDLVRRHFDGF 218
Query: 171 IWFSVGKILDLSTVMNVI 188
W V + L V I
Sbjct: 219 AWVCVSQQFTLKHVWQRI 236
>sp|C1DHE6|SYC_AZOVD Cysteine--tRNA ligase OS=Azotobacter vinelandii (strain DJ / ATCC
BAA-1303) GN=cysS PE=3 SV=1
Length = 461
Score = 33.1 bits (74), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 133 DGSTVRFIHIVGVSGTEVTHIAH-RVFMDDDIVSRFPRHIWFSVGKILDLSTVMNVITIR 191
+G+ VR +++ G++ + HI H RV + D+VSR+ RH + V + +++ + + I R
Sbjct: 20 EGNKVR-MYVCGMTVYDFCHIGHARVMVAFDVVSRWLRHSGYDVTYVRNITDIDDKIIRR 78
Query: 192 CKE 194
E
Sbjct: 79 ANE 81
>sp|Q64542|AT2B4_RAT Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus
GN=Atp2b4 PE=2 SV=1
Length = 1203
Score = 33.1 bits (74), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 44/98 (44%), Gaps = 17/98 (17%)
Query: 143 VGVSGTEVTHIAHRVFMDDDIVSR------FPRHIWFSVGKILDLSTVMNVITIRCKEIP 196
+G++GT+V A + + DD + + R+++ S+ K L +NV+ +
Sbjct: 802 MGIAGTDVAKEASDIILTDDNFTSIVKAVMWGRNVYDSISKFLQFQLTVNVVAV------ 855
Query: 197 SSEMLLIALDGLCDLNDDNLANLRLLVTNMDLVGFYVL 234
++A G C D L +++L N+ + F L
Sbjct: 856 -----IVAFSGACITQDSPLKAVQMLWVNLIMDTFASL 888
>sp|A6UP68|SYC_METVS Cysteine--tRNA ligase OS=Methanococcus vannielii (strain SB / ATCC
35089 / DSM 1224) GN=cysS PE=3 SV=1
Length = 475
Score = 33.1 bits (74), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 140 IHIVGVSGTEVTHIAH-RVFMDDDIVSRFPRHIWFSVGKILDLSTVMNVITIRC 192
I++ G + + THI H R ++ DI+ R+ HI +SV +++ + + + I R
Sbjct: 25 IYVCGPTVYDETHIGHGRTYVSFDIIRRYLEHIGYSVKLVINFTDIDDKIINRA 78
>sp|P23220|AT2B1_PIG Plasma membrane calcium-transporting ATPase 1 OS=Sus scrofa
GN=ATP2B1 PE=2 SV=1
Length = 1220
Score = 32.7 bits (73), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 45/102 (44%), Gaps = 19/102 (18%)
Query: 143 VGVSGTEVTHIAHRVFMDDDIVSR------FPRHIWFSVGKILDLSTVMNVITIRCKEIP 196
+G++GT+V A + + DD + + R+++ S+ K L +NV+ +
Sbjct: 814 MGIAGTDVAKEASDIILTDDNFTSIVKAVMWGRNVYDSISKFLQFQLTVNVVAV------ 867
Query: 197 SSEMLLIALDGLCDLNDDNLANLRLLVTN--MDLVGFYVLVT 236
++A G C D L +++L N MD + L T
Sbjct: 868 -----IVAFTGACITQDSPLKAVQMLWVNLIMDTLASLALAT 904
>sp|Q00804|AT2B1_RABIT Plasma membrane calcium-transporting ATPase 1 OS=Oryctolagus
cuniculus GN=ATP2B1 PE=2 SV=2
Length = 1249
Score = 32.7 bits (73), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 45/102 (44%), Gaps = 19/102 (18%)
Query: 143 VGVSGTEVTHIAHRVFMDDDIVSR------FPRHIWFSVGKILDLSTVMNVITIRCKEIP 196
+G++GT+V A + + DD + + R+++ S+ K L +NV+ +
Sbjct: 814 MGIAGTDVAKEASDIILTDDNFTSIVKAVMWGRNVYDSISKFLQFQLTVNVVAV------ 867
Query: 197 SSEMLLIALDGLCDLNDDNLANLRLLVTN--MDLVGFYVLVT 236
++A G C D L +++L N MD + L T
Sbjct: 868 -----IVAFTGACITQDSPLKAVQMLWVNLIMDTLASLALAT 904
>sp|P20020|AT2B1_HUMAN Plasma membrane calcium-transporting ATPase 1 OS=Homo sapiens
GN=ATP2B1 PE=1 SV=3
Length = 1258
Score = 32.7 bits (73), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 45/102 (44%), Gaps = 19/102 (18%)
Query: 143 VGVSGTEVTHIAHRVFMDDDIVSR------FPRHIWFSVGKILDLSTVMNVITIRCKEIP 196
+G++GT+V A + + DD + + R+++ S+ K L +NV+ +
Sbjct: 814 MGIAGTDVAKEASDIILTDDNFTSIVKAVMWGRNVYDSISKFLQFQLTVNVVAV------ 867
Query: 197 SSEMLLIALDGLCDLNDDNLANLRLLVTN--MDLVGFYVLVT 236
++A G C D L +++L N MD + L T
Sbjct: 868 -----IVAFTGACITQDSPLKAVQMLWVNLIMDTLASLALAT 904
>sp|P11505|AT2B1_RAT Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus
GN=Atp2b1 PE=2 SV=2
Length = 1258
Score = 32.7 bits (73), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 45/102 (44%), Gaps = 19/102 (18%)
Query: 143 VGVSGTEVTHIAHRVFMDDDIVSR------FPRHIWFSVGKILDLSTVMNVITIRCKEIP 196
+G++GT+V A + + DD + + R+++ S+ K L +NV+ +
Sbjct: 814 MGIAGTDVAKEASDIILTDDNFTSIVKAVMWGRNVYDSISKFLQFQLTVNVVAV------ 867
Query: 197 SSEMLLIALDGLCDLNDDNLANLRLLVTN--MDLVGFYVLVT 236
++A G C D L +++L N MD + L T
Sbjct: 868 -----IVAFTGACITQDSPLKAVQMLWVNLIMDTLASLALAT 904
>sp|Q64568|AT2B3_RAT Plasma membrane calcium-transporting ATPase 3 OS=Rattus norvegicus
GN=Atp2b3 PE=2 SV=2
Length = 1258
Score = 32.7 bits (73), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 44/98 (44%), Gaps = 17/98 (17%)
Query: 143 VGVSGTEVTHIAHRVFMDDDIVSR------FPRHIWFSVGKILDLSTVMNVITIRCKEIP 196
+G++GT+V A + + DD + + R+++ S+ K L +NV+ +
Sbjct: 811 MGIAGTDVAKEASDIILTDDNFTSIVKAVMWGRNVYDSISKFLQFQLTVNVVAV------ 864
Query: 197 SSEMLLIALDGLCDLNDDNLANLRLLVTNMDLVGFYVL 234
++A G C D L +++L N+ + F L
Sbjct: 865 -----IVAFTGACITQDSPLKAVQMLWVNLIMDTFASL 897
>sp|Q16720|AT2B3_HUMAN Plasma membrane calcium-transporting ATPase 3 OS=Homo sapiens
GN=ATP2B3 PE=1 SV=3
Length = 1220
Score = 32.7 bits (73), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 41/90 (45%), Gaps = 17/90 (18%)
Query: 143 VGVSGTEVTHIAHRVFMDDDIVSR------FPRHIWFSVGKILDLSTVMNVITIRCKEIP 196
+G++GT+V A + + DD + + R+++ S+ K L +NV+ +
Sbjct: 811 MGIAGTDVAKEASDIILTDDNFTSIVKAVMWGRNVYDSISKFLQFQLTVNVVAV------ 864
Query: 197 SSEMLLIALDGLCDLNDDNLANLRLLVTNM 226
++A G C D L +++L N+
Sbjct: 865 -----IVAFTGACITQDSPLKAVQMLWVNL 889
>sp|Q7XA40|RGA3_SOLBU Putative disease resistance protein RGA3 OS=Solanum bulbocastanum
GN=RGA3 PE=2 SV=2
Length = 992
Score = 32.3 bits (72), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 51/127 (40%), Gaps = 18/127 (14%)
Query: 137 VRFIHIVGVSGTEVTHIAHRVFMDDDIVSRFPRHIWFSVGKILDLSTVMNVIT------- 189
V + I+G+ G T +A VF D I F IW V D ++ I
Sbjct: 175 VPVLPILGMGGLGKTTLAQMVFNDQRITEHFNLKIWVCVSDDFDEKRLIKAIVESIEGKS 234
Query: 190 ----------IRCKEIPSSEMLLIALDGLCDLNDDNLANLRLLVTNMDLVGFYVLVTTQS 239
+ +E+ + + + LD + + + + NLR V + G +L+TT+
Sbjct: 235 LGDMDLAPLQKKLQELLNGKRYFLVLDDVWNEDQEKWDNLR-AVLKIGASGASILITTRL 293
Query: 240 RSVATMM 246
+ ++M
Sbjct: 294 EKIGSIM 300
>sp|Q1RGS4|SYGB_RICBR Glycine--tRNA ligase beta subunit OS=Rickettsia bellii (strain
RML369-C) GN=glyS PE=3 SV=1
Length = 658
Score = 32.3 bits (72), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 60/123 (48%), Gaps = 8/123 (6%)
Query: 153 IAHRVFMDDDIVSRFPRHIWFSVGKILDLSTVMNVITIRCKEI----PSSEMLLIALDGL 208
I ++F +++I ++ ++ +I +T + +T+ KEI PS+E A++G
Sbjct: 28 IFTKIFEENEIFAKI--QVFSGPRRITLYATHLPKVTLP-KEIEIKGPSTEAPEAAINGF 84
Query: 209 CDLNDDNLANLRLLVTNMDLVGFYVLVTTQSRSVATMMKQTVPEAEHLIYFSESNSWSNL 268
C ++ + L + N L FY+ + R + ++ + + EA + +++S W N
Sbjct: 85 CKAHNVSKLELSTKLINNQLYYFYI-KKVEERQIKEILPEIIVEAINKYSWAKSMFWGNY 143
Query: 269 NCE 271
N +
Sbjct: 144 NIK 146
>sp|A8GUQ4|SYGB_RICB8 Glycine--tRNA ligase beta subunit OS=Rickettsia bellii (strain OSU
85-389) GN=glyS PE=3 SV=1
Length = 658
Score = 32.3 bits (72), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 60/123 (48%), Gaps = 8/123 (6%)
Query: 153 IAHRVFMDDDIVSRFPRHIWFSVGKILDLSTVMNVITIRCKEI----PSSEMLLIALDGL 208
I ++F +++I ++ ++ +I +T + +T+ KEI PS+E A++G
Sbjct: 28 IFTKIFEENEIFAKI--QVFSGPRRITLYATHLPKVTLP-KEIEIKGPSTEAPEAAINGF 84
Query: 209 CDLNDDNLANLRLLVTNMDLVGFYVLVTTQSRSVATMMKQTVPEAEHLIYFSESNSWSNL 268
C ++ + L + N L FY+ + R + ++ + + EA + +++S W N
Sbjct: 85 CKAHNVSKLELSTKLINNQLYYFYI-KKVEERQIKEILPEIIVEAINKYSWAKSMFWGNY 143
Query: 269 NCE 271
N +
Sbjct: 144 NIK 146
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.134 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 114,412,010
Number of Sequences: 539616
Number of extensions: 4526245
Number of successful extensions: 13619
Number of sequences better than 100.0: 46
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 43
Number of HSP's that attempted gapping in prelim test: 13606
Number of HSP's gapped (non-prelim): 51
length of query: 331
length of database: 191,569,459
effective HSP length: 118
effective length of query: 213
effective length of database: 127,894,771
effective search space: 27241586223
effective search space used: 27241586223
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)