Query 020067
Match_columns 331
No_of_seqs 329 out of 1278
Neff 12.0
Searched_HMMs 46136
Date Fri Mar 29 06:45:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020067.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020067hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR01249 pro_imino_pep_1 prol 100.0 9.3E-39 2E-43 255.9 25.7 301 22-323 4-305 (306)
2 PLN02824 hydrolase, alpha/beta 100.0 6.7E-37 1.4E-41 244.7 19.2 277 21-326 7-293 (294)
3 PRK00870 haloalkane dehalogena 100.0 2.1E-36 4.6E-41 242.4 22.1 277 20-327 17-301 (302)
4 KOG4178 Soluble epoxide hydrol 100.0 2.8E-36 6.1E-41 228.3 18.5 286 20-328 20-321 (322)
5 TIGR02240 PHA_depoly_arom poly 100.0 1.8E-36 3.9E-41 239.9 17.8 261 24-329 4-268 (276)
6 PRK03592 haloalkane dehalogena 100.0 6.1E-36 1.3E-40 239.2 19.3 276 23-328 8-290 (295)
7 PLN02679 hydrolase, alpha/beta 100.0 2E-35 4.2E-40 241.0 21.1 277 25-328 64-358 (360)
8 TIGR03343 biphenyl_bphD 2-hydr 100.0 2E-35 4.4E-40 235.3 20.3 266 23-325 6-281 (282)
9 PRK06489 hypothetical protein; 100.0 9.2E-35 2E-39 237.6 21.5 271 30-329 47-359 (360)
10 PRK03204 haloalkane dehalogena 100.0 2.6E-34 5.6E-39 227.6 21.4 268 18-324 10-285 (286)
11 PLN03087 BODYGUARD 1 domain co 100.0 3.1E-34 6.8E-39 236.4 18.8 289 22-327 176-479 (481)
12 PLN02385 hydrolase; alpha/beta 100.0 3.8E-34 8.3E-39 233.4 18.8 271 20-328 59-346 (349)
13 TIGR03056 bchO_mg_che_rel puta 100.0 8.6E-34 1.9E-38 225.8 20.3 271 22-325 6-278 (278)
14 PLN02965 Probable pheophorbida 100.0 2E-34 4.3E-39 225.4 16.3 245 47-328 5-254 (255)
15 PRK10349 carboxylesterase BioH 100.0 1.7E-34 3.8E-39 226.3 13.8 253 34-327 3-256 (256)
16 PLN02578 hydrolase 100.0 2E-33 4.3E-38 229.1 19.3 278 25-325 69-353 (354)
17 PLN03084 alpha/beta hydrolase 100.0 7E-33 1.5E-37 224.4 21.4 269 25-326 107-383 (383)
18 PRK07581 hypothetical protein; 100.0 1.5E-33 3.3E-38 229.4 17.2 282 31-329 24-338 (339)
19 TIGR03611 RutD pyrimidine util 100.0 1.6E-33 3.4E-38 221.8 16.4 254 35-326 1-257 (257)
20 PRK10673 acyl-CoA esterase; Pr 100.0 3.6E-33 7.8E-38 219.1 18.1 240 42-326 13-254 (255)
21 PLN02298 hydrolase, alpha/beta 100.0 3.8E-32 8.2E-37 220.5 21.9 266 18-328 28-318 (330)
22 TIGR02427 protocat_pcaD 3-oxoa 100.0 5.2E-33 1.1E-37 218.0 16.3 249 34-325 1-251 (251)
23 PRK08775 homoserine O-acetyltr 100.0 2.3E-32 5E-37 222.2 20.2 276 22-328 36-340 (343)
24 PRK10749 lysophospholipase L2; 100.0 2.3E-32 5E-37 220.9 18.4 276 21-327 29-329 (330)
25 KOG1454 Predicted hydrolase/ac 100.0 5.3E-32 1.2E-36 214.5 19.8 285 22-328 25-325 (326)
26 TIGR01250 pro_imino_pep_2 prol 100.0 6.9E-32 1.5E-36 216.0 19.9 279 25-325 5-288 (288)
27 PRK00175 metX homoserine O-ace 100.0 9.7E-32 2.1E-36 220.6 19.7 283 31-328 31-375 (379)
28 PHA02857 monoglyceride lipase; 100.0 8.4E-32 1.8E-36 213.5 18.2 258 26-327 4-273 (276)
29 TIGR01392 homoserO_Ac_trn homo 100.0 9.5E-32 2.1E-36 219.3 18.9 280 31-325 14-351 (351)
30 PRK11126 2-succinyl-6-hydroxy- 100.0 2.2E-31 4.8E-36 207.2 17.7 238 45-327 2-242 (242)
31 TIGR01738 bioH putative pimelo 100.0 2.3E-31 5.1E-36 207.8 14.2 239 46-324 5-245 (245)
32 PRK14875 acetoin dehydrogenase 100.0 2.2E-30 4.8E-35 214.4 18.7 258 26-326 113-370 (371)
33 PLN02211 methyl indole-3-aceta 100.0 2.9E-30 6.2E-35 202.5 17.7 264 30-327 4-270 (273)
34 KOG4409 Predicted hydrolase/ac 100.0 1.6E-30 3.6E-35 197.6 15.6 283 20-327 63-364 (365)
35 PF12697 Abhydrolase_6: Alpha/ 100.0 6.1E-31 1.3E-35 203.1 13.4 224 48-319 1-228 (228)
36 COG2267 PldB Lysophospholipase 100.0 1.3E-30 2.7E-35 204.9 15.2 276 19-329 6-296 (298)
37 PLN02894 hydrolase, alpha/beta 100.0 5.7E-29 1.2E-33 204.9 21.5 272 34-329 93-387 (402)
38 PLN02511 hydrolase 100.0 7.5E-30 1.6E-34 209.4 16.1 272 20-328 69-366 (388)
39 TIGR03695 menH_SHCHC 2-succiny 100.0 1.8E-29 3.9E-34 197.8 17.3 244 45-325 1-251 (251)
40 KOG1455 Lysophospholipase [Lip 100.0 3E-29 6.5E-34 187.1 15.6 269 20-326 25-311 (313)
41 PLN02652 hydrolase; alpha/beta 100.0 9.4E-29 2E-33 201.8 19.2 265 23-328 111-388 (395)
42 PRK05855 short chain dehydroge 100.0 2.5E-28 5.4E-33 214.1 17.7 286 25-328 5-293 (582)
43 PLN02980 2-oxoglutarate decarb 100.0 3.1E-28 6.8E-33 229.3 18.2 256 35-329 1360-1641(1655)
44 COG1647 Esterase/lipase [Gener 100.0 1.1E-27 2.4E-32 169.9 12.3 223 45-326 15-243 (243)
45 KOG2984 Predicted hydrolase [G 100.0 4.4E-27 9.5E-32 163.9 14.7 250 21-327 20-276 (277)
46 PRK06765 homoserine O-acetyltr 100.0 6.5E-26 1.4E-30 184.4 22.6 279 33-326 41-387 (389)
47 TIGR01607 PST-A Plasmodium sub 99.9 3.3E-27 7.1E-32 190.1 14.0 264 27-325 2-331 (332)
48 PRK13604 luxD acyl transferase 99.9 2.3E-26 4.9E-31 177.1 17.4 239 23-328 10-260 (307)
49 PRK10985 putative hydrolase; P 99.9 4.1E-26 8.8E-31 183.9 19.6 277 21-329 30-322 (324)
50 PRK05077 frsA fermentation/res 99.9 2.8E-25 6.1E-30 183.1 20.7 238 21-327 167-412 (414)
51 PLN02872 triacylglycerol lipas 99.9 1E-25 2.2E-30 183.1 15.9 306 18-329 40-391 (395)
52 KOG2382 Predicted alpha/beta h 99.9 1E-24 2.2E-29 165.9 18.0 253 43-327 50-313 (315)
53 TIGR03100 hydr1_PEP hydrolase, 99.9 1E-24 2.2E-29 171.5 18.4 231 44-326 25-274 (274)
54 PF00561 Abhydrolase_1: alpha/ 99.9 6.5E-25 1.4E-29 169.8 12.9 226 72-321 1-229 (230)
55 TIGR01836 PHA_synth_III_C poly 99.9 2.6E-23 5.6E-28 169.7 16.9 102 44-150 61-173 (350)
56 TIGR01838 PHA_synth_I poly(R)- 99.9 5.2E-23 1.1E-27 171.9 18.4 260 44-311 187-460 (532)
57 PRK11071 esterase YqiA; Provis 99.9 6.1E-24 1.3E-28 156.8 11.2 183 46-325 2-189 (190)
58 PRK10566 esterase; Provisional 99.9 8.3E-23 1.8E-27 159.6 16.6 217 31-326 11-247 (249)
59 KOG1552 Predicted alpha/beta h 99.9 1.1E-21 2.3E-26 144.1 15.0 215 21-329 34-254 (258)
60 PRK07868 acyl-CoA synthetase; 99.9 7.7E-21 1.7E-25 174.1 21.7 270 44-328 66-362 (994)
61 KOG4391 Predicted alpha/beta h 99.9 4.9E-22 1.1E-26 140.6 8.4 221 20-328 52-283 (300)
62 COG0596 MhpC Predicted hydrola 99.9 2.9E-20 6.2E-25 147.4 18.6 263 32-325 9-280 (282)
63 COG2021 MET2 Homoserine acetyl 99.9 1E-19 2.2E-24 140.8 19.9 287 33-326 36-367 (368)
64 PF12695 Abhydrolase_5: Alpha/ 99.9 6.8E-22 1.5E-26 141.3 7.5 143 47-306 1-145 (145)
65 KOG2564 Predicted acetyltransf 99.9 2.3E-21 5E-26 142.6 8.9 103 43-147 72-181 (343)
66 KOG1838 Alpha/beta hydrolase [ 99.9 1.2E-19 2.6E-24 143.3 19.0 279 17-327 88-388 (409)
67 COG0429 Predicted hydrolase of 99.8 8E-20 1.7E-24 139.0 15.7 279 20-328 47-341 (345)
68 COG1506 DAP2 Dipeptidyl aminop 99.8 3.7E-19 8E-24 154.7 19.6 234 21-330 364-619 (620)
69 KOG4667 Predicted esterase [Li 99.8 3.2E-20 6.9E-25 131.3 10.2 205 44-310 32-243 (269)
70 PF00326 Peptidase_S9: Prolyl 99.8 1.1E-19 2.3E-24 138.2 12.8 193 63-330 6-212 (213)
71 TIGR03101 hydr2_PEP hydrolase, 99.8 2.1E-19 4.6E-24 138.2 13.2 125 25-151 3-137 (266)
72 PF03096 Ndr: Ndr family; Int 99.8 1.9E-19 4.1E-24 136.0 11.4 267 24-327 1-279 (283)
73 KOG2931 Differentiation-relate 99.8 8.2E-18 1.8E-22 125.2 19.7 272 21-326 21-305 (326)
74 PRK11460 putative hydrolase; P 99.8 5.5E-19 1.2E-23 135.1 13.5 174 42-324 13-209 (232)
75 PF06342 DUF1057: Alpha/beta h 99.8 1.7E-17 3.6E-22 123.8 17.4 111 37-150 25-139 (297)
76 COG3208 GrsT Predicted thioest 99.8 1.2E-17 2.5E-22 122.2 15.6 223 44-325 6-234 (244)
77 PLN02442 S-formylglutathione h 99.8 2.8E-17 6.1E-22 129.6 18.1 105 44-148 46-178 (283)
78 TIGR02821 fghA_ester_D S-formy 99.8 5.3E-17 1.1E-21 127.9 19.0 105 44-148 41-173 (275)
79 PF02230 Abhydrolase_2: Phosph 99.8 3.4E-18 7.4E-23 129.8 11.9 176 43-326 12-214 (216)
80 PLN00021 chlorophyllase 99.8 2.5E-17 5.4E-22 130.4 16.9 104 43-148 50-166 (313)
81 COG2945 Predicted hydrolase of 99.8 3.7E-17 8E-22 114.1 12.7 190 26-325 8-205 (210)
82 PF01738 DLH: Dienelactone hyd 99.7 9.5E-18 2.1E-22 127.9 9.2 178 44-327 13-217 (218)
83 TIGR01840 esterase_phb esteras 99.7 1.1E-16 2.3E-21 121.4 13.9 106 44-149 12-131 (212)
84 TIGR00976 /NonD putative hydro 99.7 2.4E-16 5.1E-21 136.0 17.3 120 28-150 2-134 (550)
85 COG0400 Predicted esterase [Ge 99.7 1.3E-16 2.8E-21 117.2 12.1 175 41-327 14-205 (207)
86 TIGR03230 lipo_lipase lipoprot 99.7 6.5E-17 1.4E-21 131.8 10.3 122 26-150 23-156 (442)
87 PF06500 DUF1100: Alpha/beta h 99.7 3.4E-16 7.4E-21 124.9 13.1 232 22-327 165-409 (411)
88 TIGR01849 PHB_depoly_PhaZ poly 99.7 2.9E-16 6.2E-21 126.6 12.7 296 21-326 74-405 (406)
89 PF06821 Ser_hydrolase: Serine 99.7 1.7E-16 3.6E-21 114.2 10.0 154 48-310 1-157 (171)
90 cd00707 Pancreat_lipase_like P 99.7 1.5E-16 3.2E-21 124.4 7.9 125 23-150 15-149 (275)
91 COG0412 Dienelactone hydrolase 99.7 6E-15 1.3E-19 112.3 16.2 178 45-329 27-235 (236)
92 PRK10162 acetyl esterase; Prov 99.7 6E-15 1.3E-19 118.5 16.6 122 22-149 57-196 (318)
93 PF05448 AXE1: Acetyl xylan es 99.7 3.8E-15 8.3E-20 118.2 14.8 232 25-326 59-319 (320)
94 KOG2624 Triglyceride lipase-ch 99.7 5.3E-15 1.1E-19 119.1 15.4 310 18-328 44-399 (403)
95 PRK10115 protease 2; Provision 99.7 1.4E-14 2.9E-19 127.2 18.8 130 21-150 415-561 (686)
96 TIGR01839 PHA_synth_II poly(R) 99.7 4.2E-15 9.2E-20 123.5 14.7 103 44-151 214-331 (560)
97 COG4757 Predicted alpha/beta h 99.6 1.5E-15 3.2E-20 109.2 9.4 257 25-324 8-280 (281)
98 KOG2565 Predicted hydrolases o 99.6 3E-14 6.5E-19 109.8 15.3 121 31-152 132-268 (469)
99 COG3458 Acetyl esterase (deace 99.6 3.7E-14 8E-19 104.7 15.0 230 25-328 59-318 (321)
100 PF08538 DUF1749: Protein of u 99.6 3.8E-15 8.2E-20 114.1 10.0 109 34-151 22-151 (303)
101 PF02273 Acyl_transf_2: Acyl t 99.6 6.7E-14 1.5E-18 101.8 13.8 237 24-327 4-252 (294)
102 PF05728 UPF0227: Uncharacteri 99.6 1.7E-13 3.6E-18 99.7 13.6 88 48-151 2-94 (187)
103 PTZ00472 serine carboxypeptida 99.6 2.7E-12 5.9E-17 107.5 22.1 132 20-151 45-219 (462)
104 PF10230 DUF2305: Uncharacteri 99.5 2.9E-13 6.3E-18 105.3 11.7 105 45-149 2-123 (266)
105 PRK05371 x-prolyl-dipeptidyl a 99.5 4E-13 8.7E-18 118.8 13.9 84 63-149 271-374 (767)
106 COG3243 PhaC Poly(3-hydroxyalk 99.5 5.2E-13 1.1E-17 105.4 12.1 106 45-150 107-219 (445)
107 PF00975 Thioesterase: Thioest 99.5 1.2E-13 2.5E-18 106.6 8.5 100 46-149 1-105 (229)
108 COG3545 Predicted esterase of 99.5 1.7E-12 3.7E-17 90.0 12.8 173 46-328 3-180 (181)
109 COG3571 Predicted hydrolase of 99.5 2.3E-12 4.9E-17 87.4 12.7 180 47-328 16-212 (213)
110 KOG3043 Predicted hydrolase re 99.5 1.8E-13 3.8E-18 98.4 7.6 180 40-328 33-241 (242)
111 PF06057 VirJ: Bacterial virul 99.5 1E-12 2.2E-17 93.4 10.2 96 47-149 4-108 (192)
112 TIGR03502 lipase_Pla1_cef extr 99.4 4.7E-13 1E-17 116.3 8.2 109 26-134 421-576 (792)
113 PF07859 Abhydrolase_3: alpha/ 99.4 2.1E-13 4.5E-18 103.8 5.0 96 48-148 1-110 (211)
114 PF12146 Hydrolase_4: Putative 99.4 1.8E-13 3.8E-18 84.6 3.2 76 32-108 1-79 (79)
115 PF02129 Peptidase_S15: X-Pro 99.4 6.9E-12 1.5E-16 98.9 12.9 117 31-150 1-138 (272)
116 PF12740 Chlorophyllase2: Chlo 99.4 2.2E-11 4.8E-16 91.9 13.2 100 44-148 16-131 (259)
117 PRK10252 entF enterobactin syn 99.4 1.7E-11 3.6E-16 117.7 15.1 101 44-148 1067-1171(1296)
118 KOG2100 Dipeptidyl aminopeptid 99.4 7.8E-11 1.7E-15 104.2 17.7 222 24-327 500-747 (755)
119 PF09752 DUF2048: Uncharacteri 99.3 7.6E-11 1.6E-15 92.2 15.0 238 43-325 90-347 (348)
120 KOG2281 Dipeptidyl aminopeptid 99.3 1.2E-10 2.6E-15 96.4 16.5 223 24-326 615-866 (867)
121 PF10503 Esterase_phd: Esteras 99.3 1.4E-10 2.9E-15 86.6 15.1 105 45-149 16-133 (220)
122 KOG4627 Kynurenine formamidase 99.3 2.7E-11 5.9E-16 85.9 10.0 188 36-310 57-251 (270)
123 PRK04940 hypothetical protein; 99.3 8.6E-10 1.9E-14 78.6 16.0 53 267-325 125-178 (180)
124 PF03583 LIP: Secretory lipase 99.3 6.2E-11 1.3E-15 93.5 11.1 88 63-150 18-115 (290)
125 COG4099 Predicted peptidase [G 99.3 1.1E-10 2.4E-15 87.8 11.4 115 30-147 169-303 (387)
126 KOG2551 Phospholipase/carboxyh 99.2 3.8E-10 8.3E-15 81.6 12.2 61 261-326 159-219 (230)
127 PF08840 BAAT_C: BAAT / Acyl-C 99.2 2.7E-11 5.8E-16 91.2 6.7 38 112-150 21-58 (213)
128 KOG2112 Lysophospholipase [Lip 99.2 2.4E-10 5.2E-15 82.0 10.1 175 45-327 3-204 (206)
129 PF11339 DUF3141: Protein of u 99.2 5.1E-09 1.1E-13 85.4 18.2 100 44-150 67-177 (581)
130 PF03959 FSH1: Serine hydrolas 99.2 1.9E-11 4.2E-16 92.2 4.2 47 262-310 158-205 (212)
131 PF07819 PGAP1: PGAP1-like pro 99.2 1.1E-10 2.4E-15 88.4 8.3 105 44-149 3-124 (225)
132 COG0657 Aes Esterase/lipase [L 99.2 9.3E-10 2E-14 88.9 14.2 102 44-150 78-193 (312)
133 PF00450 Peptidase_S10: Serine 99.2 9E-09 1.9E-13 86.9 19.9 131 22-152 11-185 (415)
134 PF07224 Chlorophyllase: Chlor 99.1 4.5E-10 9.7E-15 83.2 8.4 101 44-149 45-158 (307)
135 PF06028 DUF915: Alpha/beta hy 99.1 4.4E-09 9.5E-14 80.5 14.0 106 44-149 10-144 (255)
136 COG4188 Predicted dienelactone 99.1 7.7E-10 1.7E-14 86.9 10.0 93 44-136 70-182 (365)
137 KOG1515 Arylacetamide deacetyl 99.1 1.7E-08 3.6E-13 80.3 17.3 102 44-150 89-209 (336)
138 PF12715 Abhydrolase_7: Abhydr 99.1 1.7E-10 3.7E-15 91.2 5.8 84 64-148 153-260 (390)
139 COG2936 Predicted acyl esteras 99.0 2.4E-08 5.1E-13 83.7 16.1 129 22-150 19-161 (563)
140 PLN02733 phosphatidylcholine-s 99.0 2.6E-10 5.7E-15 94.2 4.4 92 58-150 108-203 (440)
141 COG3319 Thioesterase domains o 99.0 2.1E-08 4.5E-13 76.6 14.1 100 46-149 1-104 (257)
142 PF03403 PAF-AH_p_II: Platelet 99.0 6.8E-10 1.5E-14 90.7 6.0 104 44-148 99-262 (379)
143 KOG1553 Predicted alpha/beta h 99.0 4.2E-09 9E-14 81.2 9.4 122 24-148 216-345 (517)
144 PF01674 Lipase_2: Lipase (cla 98.9 1.8E-09 3.8E-14 80.6 4.8 88 46-134 2-96 (219)
145 smart00824 PKS_TE Thioesterase 98.9 4.8E-08 1E-12 74.3 12.5 80 65-148 19-102 (212)
146 PF00151 Lipase: Lipase; Inte 98.9 6.6E-10 1.4E-14 88.8 1.8 106 43-150 69-189 (331)
147 KOG3975 Uncharacterized conser 98.8 3.2E-07 6.9E-12 67.8 13.6 106 43-148 27-147 (301)
148 PF12048 DUF3530: Protein of u 98.8 5.4E-07 1.2E-11 71.9 15.8 127 23-149 63-230 (310)
149 PF05677 DUF818: Chlamydia CHL 98.8 1.5E-06 3.2E-11 67.9 16.2 86 44-134 136-236 (365)
150 KOG3253 Predicted alpha/beta h 98.8 3.1E-08 6.6E-13 82.1 7.5 68 260-328 299-379 (784)
151 PLN02209 serine carboxypeptida 98.7 1.3E-05 2.7E-10 67.1 21.3 129 22-150 39-214 (437)
152 PLN03016 sinapoylglucose-malat 98.7 7.9E-06 1.7E-10 68.3 19.4 130 21-150 36-212 (433)
153 COG3509 LpqC Poly(3-hydroxybut 98.7 5.9E-07 1.3E-11 68.5 11.5 125 23-148 36-179 (312)
154 KOG1282 Serine carboxypeptidas 98.7 2.6E-05 5.6E-10 64.8 21.9 132 20-151 42-216 (454)
155 KOG4840 Predicted hydrolases o 98.7 2.2E-07 4.8E-12 67.3 8.6 100 46-150 37-146 (299)
156 COG3150 Predicted esterase [Ge 98.6 3.2E-07 7E-12 63.4 8.7 90 48-150 2-93 (191)
157 PF10142 PhoPQ_related: PhoPQ- 98.6 1.6E-06 3.4E-11 69.9 13.6 67 259-330 256-323 (367)
158 PF04301 DUF452: Protein of un 98.6 2.3E-06 5.1E-11 63.3 13.1 81 45-150 11-92 (213)
159 PF05990 DUF900: Alpha/beta hy 98.6 1.1E-07 2.3E-12 72.7 6.1 105 44-149 17-138 (233)
160 PF10340 DUF2424: Protein of u 98.5 1.2E-06 2.5E-11 70.4 10.6 105 44-150 121-237 (374)
161 PRK10439 enterobactin/ferric e 98.5 6.3E-07 1.4E-11 74.4 7.8 103 44-147 208-322 (411)
162 PF05705 DUF829: Eukaryotic pr 98.5 2.9E-06 6.3E-11 65.8 11.2 59 266-324 178-240 (240)
163 COG1075 LipA Predicted acetylt 98.5 5.8E-07 1.3E-11 72.8 7.3 103 45-151 59-167 (336)
164 cd00312 Esterase_lipase Estera 98.5 1.2E-06 2.6E-11 75.7 9.5 105 44-149 94-214 (493)
165 COG1505 Serine proteases of th 98.4 2.9E-06 6.3E-11 70.9 10.9 130 19-148 391-535 (648)
166 COG4814 Uncharacterized protei 98.4 7.4E-06 1.6E-10 61.0 11.6 103 47-149 47-177 (288)
167 PF08386 Abhydrolase_4: TAP-li 98.4 8.6E-07 1.9E-11 58.2 6.0 60 266-326 34-93 (103)
168 KOG3847 Phospholipase A2 (plat 98.4 8.9E-07 1.9E-11 67.8 6.2 101 46-147 119-274 (399)
169 KOG1551 Uncharacterized conser 98.3 3.5E-05 7.7E-10 57.8 12.8 58 269-328 309-367 (371)
170 KOG2237 Predicted serine prote 98.3 3.3E-05 7.1E-10 65.3 13.0 129 21-149 440-585 (712)
171 COG1073 Hydrolases of the alph 98.2 7.1E-07 1.5E-11 71.8 3.2 73 255-327 221-297 (299)
172 COG4782 Uncharacterized protei 98.2 3.8E-06 8.2E-11 66.1 6.7 106 44-149 115-235 (377)
173 PF05057 DUF676: Putative seri 98.2 9.1E-07 2E-11 67.1 2.9 36 97-132 60-97 (217)
174 PLN02213 sinapoylglucose-malat 98.2 0.00025 5.4E-09 57.4 17.0 59 266-326 233-316 (319)
175 COG1770 PtrB Protease II [Amin 98.2 0.0005 1.1E-08 58.8 18.5 127 24-150 421-564 (682)
176 PF00756 Esterase: Putative es 98.2 4.9E-07 1.1E-11 70.8 0.9 52 98-149 97-151 (251)
177 PF00135 COesterase: Carboxyle 98.1 6.4E-06 1.4E-10 72.2 5.7 121 29-149 105-246 (535)
178 COG3946 VirJ Type IV secretory 98.0 2E-05 4.3E-10 62.9 7.4 82 48-136 263-349 (456)
179 KOG3724 Negative regulator of 97.9 1.4E-05 3.1E-10 69.0 5.2 122 22-148 57-220 (973)
180 COG2272 PnbA Carboxylesterase 97.9 0.00017 3.7E-09 59.6 10.6 120 30-149 77-218 (491)
181 PF05577 Peptidase_S28: Serine 97.9 8.9E-05 1.9E-09 63.0 9.6 81 70-150 58-150 (434)
182 KOG3101 Esterase D [General fu 97.9 9.2E-05 2E-09 53.7 8.0 105 45-149 44-177 (283)
183 COG2382 Fes Enterochelin ester 97.9 0.00015 3.2E-09 56.1 9.6 115 31-149 81-213 (299)
184 KOG3967 Uncharacterized conser 97.9 0.00011 2.4E-09 53.3 7.7 103 45-147 101-226 (297)
185 PF02089 Palm_thioest: Palmito 97.8 2.6E-05 5.6E-10 60.1 4.7 105 43-149 3-117 (279)
186 PF02450 LCAT: Lecithin:choles 97.8 3.6E-05 7.9E-10 63.9 6.0 114 26-151 33-163 (389)
187 COG0627 Predicted esterase [Ge 97.8 0.00013 2.9E-09 58.1 8.1 57 94-150 127-189 (316)
188 PLN02606 palmitoyl-protein thi 97.7 0.00012 2.6E-09 57.0 6.1 100 44-149 25-133 (306)
189 cd00741 Lipase Lipase. Lipase 97.7 0.00016 3.5E-09 51.7 6.4 52 98-149 9-68 (153)
190 KOG2182 Hydrolytic enzymes of 97.7 0.00019 4E-09 59.3 7.3 110 42-151 83-210 (514)
191 PLN02633 palmitoyl protein thi 97.7 0.00064 1.4E-08 53.2 9.6 100 44-149 24-132 (314)
192 KOG2541 Palmitoyl protein thio 97.6 0.0009 1.9E-08 50.7 9.0 99 44-149 22-129 (296)
193 PF11144 DUF2920: Protein of u 97.5 0.001 2.2E-08 54.1 9.2 36 114-149 185-220 (403)
194 PF01764 Lipase_3: Lipase (cla 97.5 0.00038 8.1E-09 49.0 5.9 38 97-134 48-85 (140)
195 COG4553 DepA Poly-beta-hydroxy 97.4 0.007 1.5E-07 46.7 12.4 101 46-150 104-211 (415)
196 KOG2183 Prolylcarboxypeptidase 97.4 0.00041 8.8E-09 55.9 5.8 101 46-149 81-203 (492)
197 PF04083 Abhydro_lipase: Parti 97.3 0.00031 6.6E-09 41.0 2.8 42 19-60 9-58 (63)
198 COG2819 Predicted hydrolase of 97.2 0.00074 1.6E-08 51.6 5.2 50 99-148 120-172 (264)
199 PF11187 DUF2974: Protein of u 97.2 0.0016 3.4E-08 49.5 6.6 50 100-150 72-125 (224)
200 COG4287 PqaA PhoPQ-activated p 97.1 0.0027 5.9E-08 50.5 7.6 62 262-328 326-388 (507)
201 KOG1516 Carboxylesterase and r 97.0 0.0048 1E-07 54.4 9.2 106 45-150 112-234 (545)
202 PF07082 DUF1350: Protein of u 97.0 0.0011 2.4E-08 50.1 4.2 94 48-148 20-125 (250)
203 cd00519 Lipase_3 Lipase (class 97.0 0.0019 4E-08 49.8 5.6 42 106-147 121-167 (229)
204 PLN02162 triacylglycerol lipas 96.9 0.003 6.5E-08 52.5 6.5 54 96-149 261-322 (475)
205 PLN00413 triacylglycerol lipas 96.9 0.0043 9.3E-08 51.7 6.8 54 96-149 267-328 (479)
206 COG2939 Carboxypeptidase C (ca 96.8 0.0041 9E-08 51.9 6.7 106 44-149 100-237 (498)
207 PLN02517 phosphatidylcholine-s 96.7 0.0015 3.3E-08 55.8 3.4 54 97-150 193-265 (642)
208 PLN02454 triacylglycerol lipas 96.7 0.0093 2E-07 49.1 7.5 35 99-133 212-248 (414)
209 PLN02571 triacylglycerol lipas 96.6 0.0042 9.1E-08 51.2 5.1 37 97-133 208-246 (413)
210 PF01083 Cutinase: Cutinase; 96.5 0.0074 1.6E-07 44.3 5.7 76 70-149 38-123 (179)
211 PF06259 Abhydrolase_8: Alpha/ 96.5 0.0088 1.9E-07 43.4 5.9 54 96-149 87-145 (177)
212 PF11288 DUF3089: Protein of u 96.4 0.0089 1.9E-07 44.3 5.4 65 70-134 44-116 (207)
213 PLN02408 phospholipase A1 96.3 0.0078 1.7E-07 48.9 5.1 37 98-134 183-221 (365)
214 PLN02934 triacylglycerol lipas 96.2 0.01 2.2E-07 50.0 5.1 37 96-132 304-340 (515)
215 PLN02310 triacylglycerol lipas 96.2 0.019 4.1E-07 47.3 6.6 37 97-133 189-229 (405)
216 KOG2369 Lecithin:cholesterol a 96.1 0.0087 1.9E-07 49.6 4.5 55 96-150 165-227 (473)
217 COG2830 Uncharacterized protei 96.1 0.059 1.3E-06 37.7 7.6 78 47-149 13-91 (214)
218 PLN02324 triacylglycerol lipas 96.0 0.015 3.3E-07 47.9 5.1 36 98-133 198-235 (415)
219 PF06850 PHB_depo_C: PHB de-po 95.9 0.015 3.3E-07 42.2 4.5 67 260-326 128-201 (202)
220 PF07519 Tannase: Tannase and 95.9 0.13 2.7E-06 44.3 10.7 88 64-152 52-154 (474)
221 PF05277 DUF726: Protein of un 95.9 0.038 8.3E-07 44.8 6.9 40 111-150 218-262 (345)
222 TIGR03712 acc_sec_asp2 accesso 95.8 1 2.2E-05 38.2 16.7 105 35-147 279-389 (511)
223 PLN02802 triacylglycerol lipas 95.8 0.019 4.2E-07 48.4 5.1 37 98-134 313-351 (509)
224 KOG2521 Uncharacterized conser 95.7 0.14 3E-06 41.6 9.6 62 267-328 226-291 (350)
225 KOG1283 Serine carboxypeptidas 95.7 0.11 2.4E-06 41.0 8.4 127 25-151 6-169 (414)
226 PLN02753 triacylglycerol lipas 95.7 0.022 4.9E-07 48.2 5.1 36 98-133 292-332 (531)
227 PLN03037 lipase class 3 family 95.5 0.026 5.7E-07 47.8 5.0 36 98-133 299-338 (525)
228 PLN02719 triacylglycerol lipas 95.5 0.028 6.1E-07 47.5 5.0 36 98-133 278-318 (518)
229 PLN02761 lipase class 3 family 95.4 0.033 7.1E-07 47.2 5.0 36 98-133 273-314 (527)
230 PF05576 Peptidase_S37: PS-10 95.2 0.047 1E-06 44.7 5.2 112 34-149 53-170 (448)
231 KOG4372 Predicted alpha/beta h 94.9 0.01 2.2E-07 48.2 0.8 34 98-131 135-168 (405)
232 KOG1202 Animal-type fatty acid 94.8 0.77 1.7E-05 43.5 12.1 97 43-150 2121-2221(2376)
233 PLN02847 triacylglycerol lipas 94.7 0.067 1.4E-06 46.2 5.2 28 106-133 244-271 (633)
234 PF06441 EHN: Epoxide hydrolas 94.7 0.045 9.8E-07 36.4 3.4 33 26-58 71-105 (112)
235 KOG4569 Predicted lipase [Lipi 94.7 0.065 1.4E-06 43.8 5.0 37 97-133 155-191 (336)
236 PF08237 PE-PPE: PE-PPE domain 93.9 0.49 1.1E-05 36.2 7.8 78 71-148 2-89 (225)
237 KOG2029 Uncharacterized conser 92.9 0.71 1.5E-05 40.0 7.9 38 112-149 525-573 (697)
238 COG4947 Uncharacterized protei 92.8 0.12 2.5E-06 36.8 2.8 46 104-149 92-137 (227)
239 KOG4388 Hormone-sensitive lipa 90.9 0.3 6.4E-06 42.1 3.6 100 44-148 395-508 (880)
240 COG5153 CVT17 Putative lipase 90.8 0.68 1.5E-05 36.1 5.1 30 106-135 269-298 (425)
241 KOG4540 Putative lipase essent 90.8 0.68 1.5E-05 36.1 5.1 30 106-135 269-298 (425)
242 PF07519 Tannase: Tannase and 88.3 1.2 2.7E-05 38.4 5.6 62 266-327 353-427 (474)
243 KOG2385 Uncharacterized conser 86.6 2.2 4.7E-05 36.5 5.7 43 109-151 443-490 (633)
244 COG3933 Transcriptional antite 81.2 2.3 4.9E-05 35.7 3.8 89 46-146 110-200 (470)
245 PF09949 DUF2183: Uncharacteri 79.7 12 0.00026 24.4 6.0 73 70-143 23-97 (100)
246 PF05576 Peptidase_S37: PS-10 79.0 2.7 5.9E-05 35.0 3.5 63 260-325 346-412 (448)
247 PF00698 Acyl_transf_1: Acyl t 75.4 2.6 5.7E-05 34.4 2.6 29 104-132 75-103 (318)
248 smart00827 PKS_AT Acyl transfe 74.7 4.5 9.7E-05 32.6 3.8 29 104-132 73-101 (298)
249 TIGR03131 malonate_mdcH malona 72.5 5.5 0.00012 32.1 3.8 30 104-133 67-96 (295)
250 PRK10279 hypothetical protein; 71.5 6.7 0.00014 31.7 4.0 32 103-134 23-54 (300)
251 PF10605 3HBOH: 3HB-oligomer h 70.8 5.2 0.00011 35.2 3.3 36 115-150 287-323 (690)
252 PF10081 Abhydrolase_9: Alpha/ 70.7 7.6 0.00016 30.7 3.9 89 63-151 53-150 (289)
253 PF11713 Peptidase_C80: Peptid 70.7 3.4 7.4E-05 29.6 2.0 51 75-125 57-116 (157)
254 cd07225 Pat_PNPLA6_PNPLA7 Pata 70.7 7.7 0.00017 31.5 4.2 33 102-134 32-64 (306)
255 cd07198 Patatin Patatin-like p 70.0 9.1 0.0002 27.9 4.2 32 104-135 17-48 (172)
256 cd01714 ETF_beta The electron 69.9 18 0.00039 27.3 5.8 66 69-144 74-145 (202)
257 TIGR00128 fabD malonyl CoA-acy 67.7 7.5 0.00016 31.2 3.6 29 105-133 74-103 (290)
258 COG1752 RssA Predicted esteras 67.1 9.5 0.00021 31.0 4.1 34 102-135 28-61 (306)
259 cd07207 Pat_ExoU_VipD_like Exo 67.0 11 0.00023 28.1 4.2 30 105-134 19-48 (194)
260 cd07210 Pat_hypo_W_succinogene 65.2 14 0.00029 28.4 4.4 29 106-134 21-49 (221)
261 cd07227 Pat_Fungal_NTE1 Fungal 64.3 12 0.00026 29.7 4.0 32 103-134 28-59 (269)
262 PRK12467 peptide synthase; Pro 64.2 21 0.00045 40.5 6.9 97 46-146 3693-3793(3956)
263 COG1576 Uncharacterized conser 62.1 30 0.00065 24.6 5.1 53 69-132 65-117 (155)
264 COG3887 Predicted signaling pr 61.4 20 0.00043 31.7 5.0 51 96-149 323-379 (655)
265 COG3946 VirJ Type IV secretory 60.8 26 0.00057 29.5 5.3 102 44-145 48-154 (456)
266 PF12242 Eno-Rase_NADH_b: NAD( 59.8 28 0.0006 21.4 4.0 25 111-135 38-62 (78)
267 cd07209 Pat_hypo_Ecoli_Z1214_l 59.3 17 0.00038 27.7 4.1 32 104-135 17-48 (215)
268 TIGR02816 pfaB_fam PfaB family 58.5 13 0.00029 32.8 3.7 31 104-134 255-286 (538)
269 cd07228 Pat_NTE_like_bacteria 57.8 19 0.00041 26.3 4.0 30 106-135 21-50 (175)
270 PF06309 Torsin: Torsin; Inte 57.0 7 0.00015 26.7 1.4 19 41-59 48-66 (127)
271 TIGR00067 glut_race glutamate 56.9 43 0.00094 26.3 5.9 46 283-328 12-57 (251)
272 cd07205 Pat_PNPLA6_PNPLA7_NTE1 55.0 27 0.00059 25.4 4.4 29 106-134 21-49 (175)
273 COG0796 MurI Glutamate racemas 54.3 47 0.001 26.4 5.6 60 266-328 5-64 (269)
274 KOG4389 Acetylcholinesterase/B 53.6 1.4E+02 0.0031 26.2 8.4 55 94-148 194-255 (601)
275 PRK00865 glutamate racemase; P 52.9 53 0.0011 26.0 5.9 59 267-328 6-64 (261)
276 PF02590 SPOUT_MTase: Predicte 52.4 37 0.00081 24.3 4.5 67 69-151 65-131 (155)
277 COG2939 Carboxypeptidase C (ca 51.7 34 0.00075 29.7 4.8 59 266-326 425-490 (498)
278 cd07212 Pat_PNPLA9 Patatin-lik 51.7 33 0.00072 28.0 4.7 19 116-134 35-53 (312)
279 COG0529 CysC Adenylylsulfate k 50.8 13 0.00028 27.3 1.9 57 44-104 21-82 (197)
280 cd07208 Pat_hypo_Ecoli_yjju_li 47.6 35 0.00076 27.0 4.2 31 106-136 19-50 (266)
281 PRK00103 rRNA large subunit me 46.7 73 0.0016 22.9 5.2 66 70-151 66-131 (157)
282 PF09994 DUF2235: Uncharacteri 46.7 42 0.00091 26.9 4.5 32 102-133 80-112 (277)
283 cd07224 Pat_like Patatin-like 45.5 41 0.00089 26.1 4.2 31 105-135 19-51 (233)
284 cd07230 Pat_TGL4-5_like Triacy 45.0 23 0.00049 30.4 2.9 33 105-137 93-125 (421)
285 cd08769 DAP_dppA_2 Peptidase M 43.4 97 0.0021 24.7 5.9 55 266-326 147-202 (270)
286 cd07229 Pat_TGL3_like Triacylg 43.4 26 0.00057 29.5 3.0 36 104-139 102-137 (391)
287 COG0331 FabD (acyl-carrier-pro 43.1 37 0.0008 27.7 3.7 22 111-132 83-104 (310)
288 PF03283 PAE: Pectinacetyleste 42.8 81 0.0018 26.5 5.7 44 103-146 144-193 (361)
289 COG0218 Predicted GTPase [Gene 42.1 55 0.0012 24.6 4.1 61 260-326 130-198 (200)
290 PF08484 Methyltransf_14: C-me 42.1 1.2E+02 0.0026 22.0 5.8 48 99-146 53-102 (160)
291 PF05577 Peptidase_S28: Serine 41.1 33 0.00071 29.6 3.4 38 267-307 377-414 (434)
292 PF14253 AbiH: Bacteriophage a 40.6 32 0.00069 27.3 3.0 15 111-125 233-247 (270)
293 KOG2872 Uroporphyrinogen decar 40.5 52 0.0011 26.3 3.9 70 46-121 253-336 (359)
294 COG0482 TrmU Predicted tRNA(5- 40.4 23 0.00049 29.3 2.1 62 45-113 4-65 (356)
295 TIGR00246 tRNA_RlmH_YbeA rRNA 39.8 72 0.0016 22.8 4.3 63 72-151 66-128 (153)
296 cd00382 beta_CA Carbonic anhyd 39.4 42 0.00091 22.8 3.0 31 98-128 44-74 (119)
297 PF00448 SRP54: SRP54-type pro 39.4 1.4E+02 0.003 22.5 6.1 66 69-144 81-148 (196)
298 cd07232 Pat_PLPL Patain-like p 39.0 30 0.00066 29.5 2.8 34 106-139 88-121 (407)
299 cd07231 Pat_SDP1-like Sugar-De 38.3 34 0.00074 27.9 2.8 30 106-135 89-118 (323)
300 PF03610 EIIA-man: PTS system 38.3 16 0.00035 24.5 0.9 72 48-131 3-76 (116)
301 PF09419 PGP_phosphatase: Mito 38.1 1.6E+02 0.0035 21.6 6.0 53 67-123 36-88 (168)
302 cd07204 Pat_PNPLA_like Patatin 38.0 64 0.0014 25.2 4.2 20 116-135 34-53 (243)
303 COG2230 Cfa Cyclopropane fatty 37.2 1.3E+02 0.0028 24.2 5.7 48 97-145 55-105 (283)
304 KOG2170 ATPase of the AAA+ sup 36.8 24 0.00052 28.4 1.7 23 37-59 101-123 (344)
305 COG1073 Hydrolases of the alph 36.8 99 0.0021 24.4 5.5 90 44-135 48-154 (299)
306 TIGR02883 spore_cwlD N-acetylm 36.8 90 0.0019 23.2 4.7 38 74-112 2-44 (189)
307 cd01819 Patatin_and_cPLA2 Pata 36.3 71 0.0015 22.8 4.0 19 113-131 28-46 (155)
308 PF15566 Imm18: Immunity prote 35.6 53 0.0011 18.4 2.4 30 96-125 4-33 (52)
309 KOG1209 1-Acyl dihydroxyaceton 35.4 19 0.00042 27.2 1.0 37 44-80 5-41 (289)
310 cd07218 Pat_iPLA2 Calcium-inde 35.0 73 0.0016 25.0 4.1 20 116-135 33-52 (245)
311 cd07206 Pat_TGL3-4-5_SDP1 Tria 34.9 55 0.0012 26.5 3.4 30 109-138 93-122 (298)
312 COG4097 Predicted ferric reduc 34.4 1.5E+02 0.0032 25.0 5.6 54 96-149 357-412 (438)
313 COG0541 Ffh Signal recognition 33.9 2.1E+02 0.0046 24.7 6.6 65 70-144 181-247 (451)
314 PF06500 DUF1100: Alpha/beta h 33.5 1.2E+02 0.0026 25.9 5.3 62 266-328 189-256 (411)
315 cd03379 beta_CA_cladeD Carboni 33.3 69 0.0015 22.5 3.4 28 98-125 41-68 (142)
316 cd00883 beta_CA_cladeA Carboni 32.4 69 0.0015 23.7 3.4 32 99-130 67-98 (182)
317 KOG1252 Cystathionine beta-syn 32.3 2.7E+02 0.0058 23.2 6.7 38 108-145 298-336 (362)
318 PLN03019 carbonic anhydrase 32.3 78 0.0017 26.0 3.9 33 98-130 200-232 (330)
319 cd07220 Pat_PNPLA2 Patatin-lik 31.9 86 0.0019 24.7 4.0 22 114-135 37-58 (249)
320 cd07221 Pat_PNPLA3 Patatin-lik 31.9 91 0.002 24.6 4.2 22 114-135 33-54 (252)
321 PF00091 Tubulin: Tubulin/FtsZ 31.7 1.5E+02 0.0034 22.6 5.4 48 100-147 111-166 (216)
322 PRK05579 bifunctional phosphop 31.6 1.2E+02 0.0026 25.9 5.1 72 45-120 116-196 (399)
323 PRK14974 cell division protein 31.4 2.3E+02 0.005 23.6 6.5 66 69-144 220-287 (336)
324 PF03490 Varsurf_PPLC: Variant 31.0 62 0.0013 17.8 2.1 27 93-119 5-31 (51)
325 PRK04148 hypothetical protein; 30.4 1.8E+02 0.0039 20.3 4.9 30 113-146 18-47 (134)
326 PRK10319 N-acetylmuramoyl-l-al 29.8 1.6E+02 0.0035 23.8 5.3 42 70-112 54-100 (287)
327 TIGR01425 SRP54_euk signal rec 29.7 2.1E+02 0.0046 24.8 6.2 65 70-144 181-247 (429)
328 PF01118 Semialdhyde_dh: Semia 29.6 1.2E+02 0.0026 20.5 4.1 32 114-146 1-33 (121)
329 COG1582 FlgEa Uncharacterized 29.1 1.2E+02 0.0026 17.8 3.1 36 291-328 24-59 (67)
330 PF03681 UPF0150: Uncharacteri 29.1 90 0.002 16.8 2.8 33 69-108 11-43 (48)
331 PF00484 Pro_CA: Carbonic anhy 28.7 1.6E+02 0.0034 20.9 4.8 36 96-131 38-73 (153)
332 cd07222 Pat_PNPLA4 Patatin-lik 28.6 94 0.002 24.4 3.8 18 115-132 33-50 (246)
333 PLN03006 carbonate dehydratase 28.0 87 0.0019 25.4 3.5 30 99-128 158-187 (301)
334 KOG3551 Syntrophins (type beta 28.0 55 0.0012 27.3 2.4 38 20-57 449-497 (506)
335 PLN03014 carbonic anhydrase 27.7 1.1E+02 0.0024 25.4 4.0 31 99-129 206-236 (347)
336 PRK14194 bifunctional 5,10-met 27.6 1.3E+02 0.0027 24.6 4.3 34 100-133 143-182 (301)
337 PF01734 Patatin: Patatin-like 27.5 57 0.0012 23.8 2.5 23 112-134 26-48 (204)
338 PF12641 Flavodoxin_3: Flavodo 27.3 2.2E+02 0.0048 20.6 5.2 59 266-325 39-97 (160)
339 cd00884 beta_CA_cladeB Carboni 27.0 1E+02 0.0022 23.1 3.5 33 98-130 72-104 (190)
340 PF06289 FlbD: Flagellar prote 26.6 1E+02 0.0022 17.9 2.7 34 292-327 25-58 (60)
341 KOG4231 Intracellular membrane 26.5 93 0.002 27.3 3.5 54 68-134 413-471 (763)
342 PF13709 DUF4159: Domain of un 26.4 1.4E+02 0.0031 22.7 4.3 38 266-303 53-90 (207)
343 cd07217 Pat17_PNPLA8_PNPLA9_li 26.3 64 0.0014 26.8 2.7 18 116-133 44-61 (344)
344 PRK10431 N-acetylmuramoyl-l-al 25.9 2.1E+02 0.0046 24.9 5.6 37 73-110 192-233 (445)
345 TIGR00521 coaBC_dfp phosphopan 25.7 2.2E+02 0.0048 24.3 5.7 72 46-120 113-193 (390)
346 PLN00416 carbonate dehydratase 25.5 1.5E+02 0.0033 23.5 4.4 33 98-130 125-157 (258)
347 TIGR02683 upstrm_HI1419 probab 25.3 81 0.0018 20.3 2.5 25 28-55 53-77 (95)
348 COG1087 GalE UDP-glucose 4-epi 25.2 91 0.002 25.4 3.1 85 63-149 16-121 (329)
349 cd07211 Pat_PNPLA8 Patatin-lik 25.2 59 0.0013 26.5 2.3 52 69-132 5-60 (308)
350 cd03557 L-arabinose_isomerase 25.0 4.9E+02 0.011 23.1 10.9 56 93-148 15-77 (484)
351 cd07213 Pat17_PNPLA8_PNPLA9_li 24.7 70 0.0015 25.8 2.6 19 116-134 37-55 (288)
352 PF01520 Amidase_3: N-acetylmu 24.7 84 0.0018 22.8 2.8 42 76-119 2-48 (175)
353 PRK07877 hypothetical protein; 24.7 1.7E+02 0.0037 27.4 5.1 40 107-148 102-141 (722)
354 COG0288 CynT Carbonic anhydras 24.6 88 0.0019 23.8 2.9 35 97-131 76-110 (207)
355 cd00006 PTS_IIA_man PTS_IIA, P 24.6 1.3E+02 0.0027 20.4 3.5 70 47-128 3-73 (122)
356 KOG0780 Signal recognition par 24.2 2.7E+02 0.0058 23.8 5.6 58 67-134 179-236 (483)
357 PLN02154 carbonic anhydrase 23.5 1.3E+02 0.0029 24.2 3.7 32 99-130 152-183 (290)
358 TIGR02354 thiF_fam2 thiamine b 22.6 2E+02 0.0044 21.7 4.5 40 105-147 14-54 (200)
359 TIGR03607 patatin-related prot 22.5 1.5E+02 0.0031 27.9 4.3 22 111-132 64-85 (739)
360 PF02882 THF_DHG_CYH_C: Tetrah 22.4 2.4E+02 0.0052 20.4 4.6 34 100-133 20-59 (160)
361 PLN02752 [acyl-carrier protein 22.2 1E+02 0.0022 25.6 3.1 19 115-133 126-144 (343)
362 COG3673 Uncharacterized conser 22.1 2.5E+02 0.0054 23.2 4.9 64 70-133 63-142 (423)
363 cd06896 PX_PI3K_C2_gamma The p 22.0 2.1E+02 0.0046 18.7 3.7 43 287-330 42-84 (101)
364 TIGR02813 omega_3_PfaA polyket 21.8 1E+02 0.0022 33.8 3.5 28 104-131 665-692 (2582)
365 COG1246 ArgA N-acetylglutamate 21.4 1.5E+02 0.0033 21.2 3.3 40 73-123 71-110 (153)
366 cd02696 MurNAc-LAA N-acetylmur 21.4 2E+02 0.0043 20.8 4.2 37 75-112 2-43 (172)
367 TIGR03707 PPK2_P_aer polyphosp 20.9 74 0.0016 24.7 1.9 69 44-126 29-102 (230)
368 PF05973 Gp49: Phage derived p 20.8 1.2E+02 0.0026 19.1 2.6 21 32-55 52-72 (91)
369 cd00281 DAP_dppA Peptidase M55 20.6 3.2E+02 0.0068 21.9 5.2 54 266-325 146-200 (265)
370 PRK01710 murD UDP-N-acetylmura 20.5 2.2E+02 0.0048 24.9 4.9 35 101-135 3-37 (458)
371 COG4667 Predicted esterase of 20.4 1.2E+02 0.0026 24.2 2.8 40 102-142 29-69 (292)
372 PF11009 DUF2847: Protein of u 20.4 2.7E+02 0.0059 18.5 4.1 35 100-134 7-41 (105)
373 KOG2728 Uncharacterized conser 20.3 1.1E+02 0.0024 23.9 2.6 47 34-80 32-82 (302)
374 TIGR00959 ffh signal recogniti 20.3 5.2E+02 0.011 22.5 6.9 66 69-144 180-247 (428)
375 cd03378 beta_CA_cladeC Carboni 20.3 1.9E+02 0.0041 20.8 3.7 30 99-128 78-107 (154)
376 cd01014 nicotinamidase_related 20.2 2.2E+02 0.0047 20.3 4.1 46 102-147 89-134 (155)
377 TIGR03709 PPK2_rel_1 polyphosp 20.1 74 0.0016 25.3 1.8 37 44-80 54-93 (264)
378 PRK15219 carbonic anhydrase; P 20.0 1.6E+02 0.0034 23.2 3.5 32 99-130 129-160 (245)
379 COG2240 PdxK Pyridoxal/pyridox 20.0 4.8E+02 0.01 21.1 7.3 81 68-150 25-115 (281)
No 1
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=100.00 E-value=9.3e-39 Score=255.88 Aligned_cols=301 Identities=65% Similarity=1.149 Sum_probs=194.7
Q ss_pred CccceeEeCCCceEEEEeCCCCCCCcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHH
Q 020067 22 YSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLID 101 (331)
Q Consensus 22 ~~~~~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~ 101 (331)
....++...+|.+++|...|++++++|||+||++++..++.....+...+|+|+++|+||||.|........++.+++++
T Consensus 4 ~~~~~~~~~~~~~l~y~~~g~~~~~~lvllHG~~~~~~~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 83 (306)
T TIGR01249 4 FVSGYLNVSDNHQLYYEQSGNPDGKPVVFLHGGPGSGTDPGCRRFFDPETYRIVLFDQRGCGKSTPHACLEENTTWDLVA 83 (306)
T ss_pred ccCCeEEcCCCcEEEEEECcCCCCCEEEEECCCCCCCCCHHHHhccCccCCEEEEECCCCCCCCCCCCCcccCCHHHHHH
Confidence 35678999999999999999767889999999877655544444555578999999999999998654333567889999
Q ss_pred HHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcch
Q 020067 102 DIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENE 181 (331)
Q Consensus 102 ~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (331)
|+..+++.++.++++++||||||.+++.++.++|++++++|++++.........+....+.....+..|..+...++...
T Consensus 84 dl~~l~~~l~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (306)
T TIGR01249 84 DIEKLREKLGIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFLLREKEWSWFYEGGASMIYPDAWQRFMDSIPENE 163 (306)
T ss_pred HHHHHHHHcCCCCEEEEEECHHHHHHHHHHHHChHhhhhheeeccccCCHHHHHHHHhcchhhhCHHHHHHHhhhCChhh
Confidence 99999999999999999999999999999999999999999999866543322222222222233344444443333322
Q ss_pred h-hhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhh
Q 020067 182 R-SCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDN 260 (331)
Q Consensus 182 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (331)
. ..+...+...+..............+..|.. .......+..............+......+.....+..........
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (306)
T TIGR01249 164 RNEQLVNAYHDRLQSGDEETKLAAAKAWVDWES-TTLLRPINEIVSTAEDFKFSLAFARLENHYFVNKGFLDVENFILDN 242 (306)
T ss_pred hhccHHHHHHHHccCCCHHHHHHHHHHHHHHhC-hhhcCCCCCccccccchHHHHHHHHHHHhHHHHhchhcCchHHHHh
Confidence 2 3344444444433333222222233332221 0111111111111111112222222222222222222212334556
Q ss_pred ccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHH
Q 020067 261 IDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKL 323 (331)
Q Consensus 261 l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~f 323 (331)
+.++.++|+|+|+|++|.++|.+.++.+++.++++++++++++||.++.++..+.+.+.+.+|
T Consensus 243 ~~~i~~~P~lii~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~i~~~~~~~ 305 (306)
T TIGR01249 243 ISKIRNIPTYIVHGRYDLCCPLQSAWALHKAFPEAELKVTNNAGHSAFDPNNLAALVHALETY 305 (306)
T ss_pred hhhccCCCeEEEecCCCCCCCHHHHHHHHHhCCCCEEEEECCCCCCCCChHHHHHHHHHHHHh
Confidence 677734999999999999999999999999999999999999999997665555555555555
No 2
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=6.7e-37 Score=244.68 Aligned_cols=277 Identities=16% Similarity=0.131 Sum_probs=171.4
Q ss_pred CCccceeEeCCCceEEEEeCCCCCCCcEEEeccCCCCCCCCC-cccccCCCCcEEEEecCCCCCCCCCCCC-----CCcc
Q 020067 21 PYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPS-NRRFFDPDFYRIILFDQRGAGKSTPHAC-----LDQN 94 (331)
Q Consensus 21 ~~~~~~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~~~~-~~~~~~~~g~~vi~~D~~G~G~s~~~~~-----~~~~ 94 (331)
..+.++++.. |.+++|...|+ ++++|||+||++++...|. .+..+ +..|+|+++|+||||.|+.+.. ...+
T Consensus 7 ~~~~~~~~~~-~~~i~y~~~G~-~~~~vlllHG~~~~~~~w~~~~~~L-~~~~~vi~~DlpG~G~S~~~~~~~~~~~~~~ 83 (294)
T PLN02824 7 QVETRTWRWK-GYNIRYQRAGT-SGPALVLVHGFGGNADHWRKNTPVL-AKSHRVYAIDLLGYGYSDKPNPRSAPPNSFY 83 (294)
T ss_pred CCCCceEEEc-CeEEEEEEcCC-CCCeEEEECCCCCChhHHHHHHHHH-HhCCeEEEEcCCCCCCCCCCccccccccccC
Confidence 3456677775 55999999885 3689999999877655554 44444 5668999999999999986531 1358
Q ss_pred chHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhh
Q 020067 95 TTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFR 174 (331)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (331)
+++++++|+.++++.++.++++++||||||.+++.+|.++|++|+++|++++......... ...........+.
T Consensus 84 ~~~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~------~~~~~~~~~~~~~ 157 (294)
T PLN02824 84 TFETWGEQLNDFCSDVVGDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKK------QPWLGRPFIKAFQ 157 (294)
T ss_pred CHHHHHHHHHHHHHHhcCCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccc------cchhhhHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999997543210000 0000000000000
Q ss_pred ccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcC----CccHHHHHHhhhhhhhhhccCC
Q 020067 175 DLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRG----EDDIFSLAFARIENHYFLNKGF 250 (331)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 250 (331)
..+.... ....+...... ...... .+. ..........++..... ........+... . .
T Consensus 158 ~~~~~~~---~~~~~~~~~~~--~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~----~ 219 (294)
T PLN02824 158 NLLRETA---VGKAFFKSVAT--PETVKN---ILC--QCYHDDSAVTDELVEAILRPGLEPGAVDVFLDF----I----S 219 (294)
T ss_pred HHHhchh---HHHHHHHhhcC--HHHHHH---HHH--HhccChhhccHHHHHHHHhccCCchHHHHHHHH----h----c
Confidence 0000000 00000000000 000000 000 00000000001000000 000000000000 0 0
Q ss_pred CCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHh
Q 020067 251 FPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNL 326 (331)
Q Consensus 251 ~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 326 (331)
........+.+.++ ++|+|+|+|++|.++|.+.++.+.+..+++++++++++||+++.++ |+++.+.|.+|+++
T Consensus 220 ~~~~~~~~~~l~~i-~~P~lvi~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~-p~~~~~~i~~fl~~ 293 (294)
T PLN02824 220 YSGGPLPEELLPAV-KCPVLIAWGEKDPWEPVELGRAYANFDAVEDFIVLPGVGHCPQDEA-PELVNPLIESFVAR 293 (294)
T ss_pred cccccchHHHHhhc-CCCeEEEEecCCCCCChHHHHHHHhcCCccceEEeCCCCCChhhhC-HHHHHHHHHHHHhc
Confidence 00011223567888 6999999999999999999999888888899999999999999997 99999999999976
No 3
>PRK00870 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=2.1e-36 Score=242.45 Aligned_cols=277 Identities=19% Similarity=0.196 Sum_probs=173.2
Q ss_pred CCCccceeEeCCC----ceEEEEeCCCCCCCcEEEeccCCCCCCC-CCcccccCCCCcEEEEecCCCCCCCCCCCCCCcc
Q 020067 20 EPYSTGILKVSDI----HTIYWEQSGNPTGHPVVFLHGGPGGGTT-PSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQN 94 (331)
Q Consensus 20 ~~~~~~~~~~~~g----~~l~~~~~g~~~~~~vl~~HG~~~~~~~-~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~ 94 (331)
.++..+++++.++ .+++|...|++++|+|||+||++++... ...+..+.++||+|+++|+||||.|..+.....+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~i~y~~~G~~~~~~lvliHG~~~~~~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~~~~ 96 (302)
T PRK00870 17 YPFAPHYVDVDDGDGGPLRMHYVDEGPADGPPVLLLHGEPSWSYLYRKMIPILAAAGHRVIAPDLIGFGRSDKPTRREDY 96 (302)
T ss_pred CCCCceeEeecCCCCceEEEEEEecCCCCCCEEEEECCCCCchhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCcccC
Confidence 4556778888762 5899999997678999999998766544 4455555557999999999999999865433457
Q ss_pred chHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhh
Q 020067 95 TTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFR 174 (331)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (331)
+++++++++.+++++++.++++++||||||.+++.+|.++|++++++|++++........... ....|..+.
T Consensus 97 ~~~~~a~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~--------~~~~~~~~~ 168 (302)
T PRK00870 97 TYARHVEWMRSWFEQLDLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGPMPD--------AFWAWRAFS 168 (302)
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCccccchH--------HHhhhhccc
Confidence 899999999999999999999999999999999999999999999999998743211100000 000011000
Q ss_pred ccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCc
Q 020067 175 DLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSD 254 (331)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (331)
...+.......... .......... ...+. . ...... .... . ..+........... .....
T Consensus 169 ~~~~~~~~~~~~~~---~~~~~~~~~~---~~~~~------~-~~~~~~-~~~~----~-~~~~~~~~~~~~~~-~~~~~ 228 (302)
T PRK00870 169 QYSPVLPVGRLVNG---GTVRDLSDAV---RAAYD------A-PFPDES-YKAG----A-RAFPLLVPTSPDDP-AVAAN 228 (302)
T ss_pred ccCchhhHHHHhhc---cccccCCHHH---HHHhh------c-ccCChh-hhcc----h-hhhhhcCCCCCCCc-chHHH
Confidence 00000000000000 0000000000 00000 0 000000 0000 0 00000000000000 00001
Q ss_pred chhhhhccccccccEEEEecCCCCccCCcchHHHHHhCCCCc---EEEecCCCCCCCcCCchhHHHHHHHHHHHhh
Q 020067 255 SFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEAD---FKVVADAGHSANEPGIAAELVATNEKLKNLI 327 (331)
Q Consensus 255 ~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~---~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 327 (331)
......+.++ ++|+++|+|++|.++|... +.+.+.+++++ +++++++||+++.++ |+++++.|.+|+++.
T Consensus 229 ~~~~~~l~~i-~~P~lii~G~~D~~~~~~~-~~~~~~~~~~~~~~~~~i~~~gH~~~~e~-p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 229 RAAWAVLERW-DKPFLTAFSDSDPITGGGD-AILQKRIPGAAGQPHPTIKGAGHFLQEDS-GEELAEAVLEFIRAT 301 (302)
T ss_pred HHHHHhhhcC-CCceEEEecCCCCcccCch-HHHHhhcccccccceeeecCCCccchhhC-hHHHHHHHHHHHhcC
Confidence 1233467888 6999999999999999866 88999898776 889999999999997 999999999999764
No 4
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=100.00 E-value=2.8e-36 Score=228.27 Aligned_cols=286 Identities=19% Similarity=0.211 Sum_probs=182.2
Q ss_pred CCCccceeEeCCCceEEEEeCCCCCCCcEEEeccCCCCCCCC-CcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHH
Q 020067 20 EPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTP-SNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWD 98 (331)
Q Consensus 20 ~~~~~~~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~~~-~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~ 98 (331)
...+.++++.++ .+++|.+.|+.++|.|+++||++.++..| .....+...||+|+|+|+||+|.|+.+.....|++..
T Consensus 20 ~~~~hk~~~~~g-I~~h~~e~g~~~gP~illlHGfPe~wyswr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~~~ 98 (322)
T KOG4178|consen 20 SAISHKFVTYKG-IRLHYVEGGPGDGPIVLLLHGFPESWYSWRHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEYTIDE 98 (322)
T ss_pred hhcceeeEEEcc-EEEEEEeecCCCCCEEEEEccCCccchhhhhhhhhhhhcceEEEecCCCCCCCCCCCCCcceeeHHH
Confidence 345566666665 69999999998999999999999886654 5566666788999999999999999998778899999
Q ss_pred HHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhcc--
Q 020067 99 LIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDL-- 176 (331)
Q Consensus 99 ~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 176 (331)
++.|+..++++++.++++++||+||+.+|+.+|..+|++|+++|.++.+...+.... .. .....+...+.....+
T Consensus 99 l~~di~~lld~Lg~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~~p~~~~-~~--~~~~~f~~~~y~~~fQ~~ 175 (322)
T KOG4178|consen 99 LVGDIVALLDHLGLKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFPNPKLKP-LD--SSKAIFGKSYYICLFQEP 175 (322)
T ss_pred HHHHHHHHHHHhccceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCCCcccch-hh--hhccccCccceeEecccc
Confidence 999999999999999999999999999999999999999999999998765211000 00 0000111111110000
Q ss_pred ------CCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhh----hhhhhh
Q 020067 177 ------IPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARI----ENHYFL 246 (331)
Q Consensus 177 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 246 (331)
+.....+.+...+...-..... ........++.++...+...+...+..- ..+++.
T Consensus 176 ~~~E~~~s~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~w~t~edi~~~~~~f~~~g~~gplNyyr 241 (322)
T KOG4178|consen 176 GKPETELSKDDTEMLVKTFRTRKTPGPL--------------IVPKQPNENPLWLTEEDIAFYVSKFQIDGFTGPLNYYR 241 (322)
T ss_pred CcchhhhccchhHHhHHhhhccccCCcc--------------ccCCCCCCccchhhHHHHHHHHhccccccccccchhhH
Confidence 0000000111111000000000 0000000001111111111111111110 011111
Q ss_pred ccCCCCCcc-hhhhhccccccccEEEEecCCCCccCCc-chHHHHHhCCCC-cEEEecCCCCCCCcCCchhHHHHHHHHH
Q 020067 247 NKGFFPSDS-FLLDNIDNIRHINATIVQGRYDVCCPMM-SAWDLHKAWPEA-DFKVVADAGHSANEPGIAAELVATNEKL 323 (331)
Q Consensus 247 ~~~~~~~~~-~~~~~l~~i~~~P~l~i~G~~D~~~~~~-~~~~~~~~~~~~-~~~~~~~~gH~~~~~~~~~~~~~~i~~f 323 (331)
+... .+ ...-.+.++ ++|+++|+|+.|.+.+.. ..+.+.+.+|+. +.++++|+||++++|+ |+++.+.|.+|
T Consensus 242 n~~r---~w~a~~~~~~~i-~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~l~~~vv~~~~gH~vqqe~-p~~v~~~i~~f 316 (322)
T KOG4178|consen 242 NFRR---NWEAAPWALAKI-TIPVLFIWGDLDPVLPYPIFGELYRKDVPRLTERVVIEGIGHFVQQEK-PQEVNQAILGF 316 (322)
T ss_pred HHhh---Cchhcccccccc-ccceEEEEecCcccccchhHHHHHHHhhccccceEEecCCcccccccC-HHHHHHHHHHH
Confidence 1100 11 123367788 699999999999998865 556666667776 7888999999999998 99999999999
Q ss_pred HHhhh
Q 020067 324 KNLIK 328 (331)
Q Consensus 324 l~~~~ 328 (331)
+++..
T Consensus 317 ~~~~~ 321 (322)
T KOG4178|consen 317 INSFS 321 (322)
T ss_pred HHhhc
Confidence 98753
No 5
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=100.00 E-value=1.8e-36 Score=239.87 Aligned_cols=261 Identities=15% Similarity=0.120 Sum_probs=168.7
Q ss_pred cceeEeCCCceEEEEeC-CCCCCCcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHH
Q 020067 24 TGILKVSDIHTIYWEQS-GNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDD 102 (331)
Q Consensus 24 ~~~~~~~~g~~l~~~~~-g~~~~~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~ 102 (331)
.+++++++. +++|... |.+++++|||+||++++...|......+.++|+|+++|+||||.|+.+. ..+++++++++
T Consensus 4 ~~~~~~~~~-~~~~~~~~~~~~~~plvllHG~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~--~~~~~~~~~~~ 80 (276)
T TIGR02240 4 FRTIDLDGQ-SIRTAVRPGKEGLTPLLIFNGIGANLELVFPFIEALDPDLEVIAFDVPGVGGSSTPR--HPYRFPGLAKL 80 (276)
T ss_pred EEEeccCCc-EEEEEEecCCCCCCcEEEEeCCCcchHHHHHHHHHhccCceEEEECCCCCCCCCCCC--CcCcHHHHHHH
Confidence 345666554 8999775 3334579999999777655554444445678999999999999998654 36789999999
Q ss_pred HHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhc---cCCc
Q 020067 103 IEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRD---LIPE 179 (331)
Q Consensus 103 ~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 179 (331)
+.++++.++.++++|+||||||.+++.+|.++|++++++|+++++........ .+..+..... .+..
T Consensus 81 ~~~~i~~l~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~ 150 (276)
T TIGR02240 81 AARMLDYLDYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPG----------KPKVLMMMASPRRYIQP 150 (276)
T ss_pred HHHHHHHhCcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCC----------chhHHHHhcCchhhhcc
Confidence 99999999999999999999999999999999999999999998764210000 0000000000 0000
Q ss_pred chhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhh
Q 020067 180 NERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLD 259 (331)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (331)
.........+........... ...+ ... .............. ... ..+..+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~----~~~~------~~~------~~~~~~~~~~~~~~--------~~~-----~~~~~~ 201 (276)
T TIGR02240 151 SHGIHIAPDIYGGAFRRDPEL----AMAH------ASK------VRSGGKLGYYWQLF--------AGL-----GWTSIH 201 (276)
T ss_pred ccccchhhhhccceeeccchh----hhhh------hhh------cccCCCchHHHHHH--------HHc-----CCchhh
Confidence 000000000000000000000 0000 000 00000000000000 000 112234
Q ss_pred hccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhhhc
Q 020067 260 NIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNLIKN 329 (331)
Q Consensus 260 ~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~~ 329 (331)
.+.++ ++|+|+|+|++|+++|++.++.+.+.+|++++++++ +||+++.++ |+++++.|.+|+++...
T Consensus 202 ~l~~i-~~P~lii~G~~D~~v~~~~~~~l~~~~~~~~~~~i~-~gH~~~~e~-p~~~~~~i~~fl~~~~~ 268 (276)
T TIGR02240 202 WLHKI-QQPTLVLAGDDDPIIPLINMRLLAWRIPNAELHIID-DGHLFLITR-AEAVAPIIMKFLAEERQ 268 (276)
T ss_pred HhhcC-CCCEEEEEeCCCCcCCHHHHHHHHHhCCCCEEEEEc-CCCchhhcc-HHHHHHHHHHHHHHhhh
Confidence 57889 699999999999999999999999999999999997 599999997 99999999999988754
No 6
>PRK03592 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=6.1e-36 Score=239.24 Aligned_cols=276 Identities=15% Similarity=0.155 Sum_probs=166.4
Q ss_pred ccceeEeCCCceEEEEeCCCCCCCcEEEeccCCCCCCCCC-cccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHH
Q 020067 23 STGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPS-NRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLID 101 (331)
Q Consensus 23 ~~~~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~~~~-~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~ 101 (331)
+..++++ +|.+++|...| ++++|||+||++++...|. .+..+ .+.|+||++|+||||.|+.+. ..++++++++
T Consensus 8 ~~~~~~~-~g~~i~y~~~G--~g~~vvllHG~~~~~~~w~~~~~~L-~~~~~via~D~~G~G~S~~~~--~~~~~~~~a~ 81 (295)
T PRK03592 8 EMRRVEV-LGSRMAYIETG--EGDPIVFLHGNPTSSYLWRNIIPHL-AGLGRCLAPDLIGMGASDKPD--IDYTFADHAR 81 (295)
T ss_pred cceEEEE-CCEEEEEEEeC--CCCEEEEECCCCCCHHHHHHHHHHH-hhCCEEEEEcCCCCCCCCCCC--CCCCHHHHHH
Confidence 4455665 55699999998 5789999999877765554 44444 445699999999999998765 3579999999
Q ss_pred HHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccC-Ccc
Q 020067 102 DIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLI-PEN 180 (331)
Q Consensus 102 ~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 180 (331)
|+..+++.++.++++++||||||.+++.++.++|++|+++|++++......... + .......+..+.... ...
T Consensus 82 dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~~~ 155 (295)
T PRK03592 82 YLDAWFDALGLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDD-F-----PPAVRELFQALRSPGEGEE 155 (295)
T ss_pred HHHHHHHHhCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhh-c-----chhHHHHHHHHhCcccccc
Confidence 999999999999999999999999999999999999999999998433210000 0 000000000000000 000
Q ss_pred h---hhhhHHhhccccCCCc-hHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcch
Q 020067 181 E---RSCFVDAYSKRLNSDD-KETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSF 256 (331)
Q Consensus 181 ~---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (331)
. ...+...+........ ..... ..+. .. ...+... ................ ........+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~------~~-~~~~~~~-----~~~~~~~~~~~~~~~~-~~~~~~~~~ 219 (295)
T PRK03592 156 MVLEENVFIERVLPGSILRPLSDEEM---AVYR------RP-FPTPESR-----RPTLSWPRELPIDGEP-ADVVALVEE 219 (295)
T ss_pred cccchhhHHhhcccCcccccCCHHHH---HHHH------hh-cCCchhh-----hhhhhhhhhcCCCCcc-hhhHhhhhH
Confidence 0 0000111111000000 00000 0000 00 0000000 0000000000000000 000000112
Q ss_pred hhhhccccccccEEEEecCCCCccCCcchHHH-HHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhhh
Q 020067 257 LLDNIDNIRHINATIVQGRYDVCCPMMSAWDL-HKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNLIK 328 (331)
Q Consensus 257 ~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~-~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~ 328 (331)
....+.++ ++|+|+|+|++|.++++....++ .+..+++++++++++||+++.++ |+++++.|.+|+++..
T Consensus 220 ~~~~l~~i-~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~-p~~v~~~i~~fl~~~~ 290 (295)
T PRK03592 220 YAQWLATS-DVPKLLINAEPGAILTTGAIRDWCRSWPNQLEITVFGAGLHFAQEDS-PEEIGAAIAAWLRRLR 290 (295)
T ss_pred hHHHhccC-CCCeEEEeccCCcccCcHHHHHHHHHhhhhcceeeccCcchhhhhcC-HHHHHHHHHHHHHHhc
Confidence 33457788 69999999999999965555455 45568999999999999999997 9999999999998763
No 7
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=2e-35 Score=240.97 Aligned_cols=277 Identities=18% Similarity=0.176 Sum_probs=167.2
Q ss_pred ceeEeCCCceEEEEeCCCC----CCCcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHH
Q 020067 25 GILKVSDIHTIYWEQSGNP----TGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLI 100 (331)
Q Consensus 25 ~~~~~~~g~~l~~~~~g~~----~~~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~ 100 (331)
++++..+..+++|...|++ ++|+|||+||++++...|......+.++|+|+++|+||||.|+.+.. ..+++++++
T Consensus 64 ~~~~~~g~~~i~Y~~~G~g~~~~~gp~lvllHG~~~~~~~w~~~~~~L~~~~~via~Dl~G~G~S~~~~~-~~~~~~~~a 142 (360)
T PLN02679 64 KKWKWKGEYSINYLVKGSPEVTSSGPPVLLVHGFGASIPHWRRNIGVLAKNYTVYAIDLLGFGASDKPPG-FSYTMETWA 142 (360)
T ss_pred ceEEECCceeEEEEEecCcccCCCCCeEEEECCCCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCCCCC-ccccHHHHH
Confidence 4555554449999998864 45899999998776554443333345689999999999999986542 357899999
Q ss_pred HHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHh-CCCceeeEEEeccccchhhhh---hhHhhcccccCChhhHH-hhhc
Q 020067 101 DDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLA-HPDKVTGLVLRGIFLLRKKEI---DWFYEGGAAAIYPDAWE-SFRD 175 (331)
Q Consensus 101 ~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~-~p~~v~~li~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-~~~~ 175 (331)
+++.++++.++.++++|+||||||.+++.++.. +|++|+++|++++........ .+... ...+..+. .+..
T Consensus 143 ~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 218 (360)
T PLN02679 143 ELILDFLEEVVQKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIK----LLLPLLWLIDFLL 218 (360)
T ss_pred HHHHHHHHHhcCCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHh----hhcchHHHHHHHh
Confidence 999999999999999999999999999998874 799999999999864321100 00000 00000000 0000
Q ss_pred cCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhc----CCccHHHHHHhhhhhhhhhccCCC
Q 020067 176 LIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKR----GEDDIFSLAFARIENHYFLNKGFF 251 (331)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 251 (331)
..+. ....+........ ... ..... .........++.... .........+... .. .
T Consensus 219 ~~~~-----~~~~~~~~~~~~~-~~~-~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~--~-- 278 (360)
T PLN02679 219 KQRG-----IASALFNRVKQRD-NLK-NILLS-----VYGNKEAVDDELVEIIRGPADDEGALDAFVSI----VT--G-- 278 (360)
T ss_pred hchh-----hHHHHHHHhcCHH-HHH-HHHHH-----hccCcccCCHHHHHHHHhhccCCChHHHHHHH----Hh--c--
Confidence 0000 0000000000000 000 00000 000000000000000 0000000000000 00 0
Q ss_pred CCcchhhhhccccccccEEEEecCCCCccCCcc-----hHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHh
Q 020067 252 PSDSFLLDNIDNIRHINATIVQGRYDVCCPMMS-----AWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNL 326 (331)
Q Consensus 252 ~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~-----~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 326 (331)
....+....+.++ ++|+|+|+|++|.++|++. .+.+.+.+|++++++++++||+++.|+ |+++++.|.+|+++
T Consensus 279 ~~~~~~~~~l~~i-~~PtLii~G~~D~~~p~~~~~~~~~~~l~~~ip~~~l~~i~~aGH~~~~E~-Pe~~~~~I~~FL~~ 356 (360)
T PLN02679 279 PPGPNPIKLIPRI-SLPILVLWGDQDPFTPLDGPVGKYFSSLPSQLPNVTLYVLEGVGHCPHDDR-PDLVHEKLLPWLAQ 356 (360)
T ss_pred CCCCCHHHHhhhc-CCCEEEEEeCCCCCcCchhhHHHHHHhhhccCCceEEEEcCCCCCCccccC-HHHHHHHHHHHHHh
Confidence 0022334567889 5999999999999999863 235666789999999999999999997 99999999999987
Q ss_pred hh
Q 020067 327 IK 328 (331)
Q Consensus 327 ~~ 328 (331)
+.
T Consensus 357 ~~ 358 (360)
T PLN02679 357 LP 358 (360)
T ss_pred cC
Confidence 64
No 8
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=100.00 E-value=2e-35 Score=235.30 Aligned_cols=266 Identities=22% Similarity=0.260 Sum_probs=165.1
Q ss_pred ccceeEeC-C---CceEEEEeCCCCCCCcEEEeccCCCCCCCC----CcccccCCCCcEEEEecCCCCCCCCCCCCCCcc
Q 020067 23 STGILKVS-D---IHTIYWEQSGNPTGHPVVFLHGGPGGGTTP----SNRRFFDPDFYRIILFDQRGAGKSTPHACLDQN 94 (331)
Q Consensus 23 ~~~~~~~~-~---g~~l~~~~~g~~~~~~vl~~HG~~~~~~~~----~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~ 94 (331)
+.+++.++ + +.+++|...| ++|+|||+||++.+...| ..+..+++.||+|+++|+||||.|+........
T Consensus 6 ~~~~~~~~~~~~~~~~~~y~~~g--~~~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~ 83 (282)
T TIGR03343 6 TSKFVKINEKGLSNFRIHYNEAG--NGEAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQR 83 (282)
T ss_pred cceEEEcccccccceeEEEEecC--CCCeEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcccc
Confidence 34555553 2 4579999888 578999999976654332 234556678999999999999999865321112
Q ss_pred chHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCCh-hhHHhh
Q 020067 95 TTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYP-DAWESF 173 (331)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 173 (331)
+ ..+++++.++++.++.++++++||||||.+++.+|.++|++++++|++++......... ..+ ..+...
T Consensus 84 ~-~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~---------~~~~~~~~~~ 153 (282)
T TIGR03343 84 G-LVNARAVKGLMDALDIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFA---------PMPMEGIKLL 153 (282)
T ss_pred c-chhHHHHHHHHHHcCCCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCccccc---------cCchHHHHHH
Confidence 2 25689999999999999999999999999999999999999999999987532110000 000 000000
Q ss_pred hccCCcchhhhhHHhhccccCCCchHHHHHHHH-HhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCC
Q 020067 174 RDLIPENERSCFVDAYSKRLNSDDKETQYAAAR-AWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFP 252 (331)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (331)
........... ...+................. .|.. . ...+.. ...+... ......
T Consensus 154 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~---~----~~~~~~---------~~~~~~~-----~~~~~~- 210 (282)
T TIGR03343 154 FKLYAEPSYET-LKQMLNVFLFDQSLITEELLQGRWEN---I----QRQPEH---------LKNFLIS-----SQKAPL- 210 (282)
T ss_pred HHHhcCCCHHH-HHHHHhhCccCcccCcHHHHHhHHHH---h----hcCHHH---------HHHHHHh-----cccccc-
Confidence 00000000000 000000000000000000000 0000 0 000000 0000000 000000
Q ss_pred CcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHH
Q 020067 253 SDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKN 325 (331)
Q Consensus 253 ~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~ 325 (331)
...+....+.++ ++|+|+++|++|.+++++.++++.+.+|++++++++++||+++.++ |+.+.+.|.+|++
T Consensus 211 ~~~~~~~~l~~i-~~Pvlli~G~~D~~v~~~~~~~~~~~~~~~~~~~i~~agH~~~~e~-p~~~~~~i~~fl~ 281 (282)
T TIGR03343 211 STWDVTARLGEI-KAKTLVTWGRDDRFVPLDHGLKLLWNMPDAQLHVFSRCGHWAQWEH-ADAFNRLVIDFLR 281 (282)
T ss_pred ccchHHHHHhhC-CCCEEEEEccCCCcCCchhHHHHHHhCCCCEEEEeCCCCcCCcccC-HHHHHHHHHHHhh
Confidence 123345678889 6999999999999999999999999999999999999999999997 9999999999986
No 9
>PRK06489 hypothetical protein; Provisional
Probab=100.00 E-value=9.2e-35 Score=237.62 Aligned_cols=271 Identities=16% Similarity=0.147 Sum_probs=163.8
Q ss_pred CCCceEEEEeCCCCC-------CCcEEEeccCCCCCC-CC--Ccc-------cccCCCCcEEEEecCCCCCCCCCCCCC-
Q 020067 30 SDIHTIYWEQSGNPT-------GHPVVFLHGGPGGGT-TP--SNR-------RFFDPDFYRIILFDQRGAGKSTPHACL- 91 (331)
Q Consensus 30 ~~g~~l~~~~~g~~~-------~~~vl~~HG~~~~~~-~~--~~~-------~~~~~~g~~vi~~D~~G~G~s~~~~~~- 91 (331)
-+|.+++|...|+++ +|+|||+||++++.. |+ .+. ..++.++|+||++|+||||.|+.+...
T Consensus 47 ~~g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~~ 126 (360)
T PRK06489 47 LPELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDGL 126 (360)
T ss_pred cCCceEEEEecCCCCcccccCCCCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcCC
Confidence 456799999999654 789999999877643 33 121 233468899999999999999865421
Q ss_pred ----CccchHHHHHHHHHH-HHHhCCCcEE-EEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccC
Q 020067 92 ----DQNTTWDLIDDIEKL-RQHLEIPEWQ-VFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAI 165 (331)
Q Consensus 92 ----~~~~~~~~~~~~~~~-~~~~~~~~v~-lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~ 165 (331)
..++++++++++..+ ++++++++++ ++||||||.+++.+|.++|++|+++|++++.........+.....
T Consensus 127 ~~~~~~~~~~~~a~~~~~~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~~~~~~~~~~~~~---- 202 (360)
T PRK06489 127 RAAFPRYDYDDMVEAQYRLVTEGLGVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQPTEMSGRNWMWRRM---- 202 (360)
T ss_pred CCCCCcccHHHHHHHHHHHHHHhcCCCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCcccccHHHHHHHHH----
Confidence 147889999998875 5889999985 899999999999999999999999999987542111000000000
Q ss_pred ChhhHHhhhcc----CC--cchhhhhHHhhccccCCCchHHH------HHHHHHhhhHHHhhhcCCCChhhhhcCCccHH
Q 020067 166 YPDAWESFRDL----IP--ENERSCFVDAYSKRLNSDDKETQ------YAAARAWTKWEMMTAHLLPNEENIKRGEDDIF 233 (331)
Q Consensus 166 ~~~~~~~~~~~----~~--~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (331)
....+...... .. ..........+ ........... ......+... .... ........+
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--------~~~~~~~~~ 272 (360)
T PRK06489 203 LIESIRNDPAWNNGNYTTQPPSLKRANPMF-AIATSGGTLAYQAQAPTRAAADKLVDE-RLAA--------PVTADANDF 272 (360)
T ss_pred HHHHHHhCCCCCCCCCCCCHHHHHHHHHHH-HHHHhCCHHHHHHhcCChHHHHHHHHH-HHHh--------hhhcCHHHH
Confidence 00000000000 00 00000000000 00000000000 0000000000 0000 000000000
Q ss_pred HHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCCCccCCcch--HHHHHhCCCCcEEEecCC----CCCC
Q 020067 234 SLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSA--WDLHKAWPEADFKVVADA----GHSA 307 (331)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~--~~~~~~~~~~~~~~~~~~----gH~~ 307 (331)
...+.. .. ..+..+.+.+| ++|+|+|+|++|.++|++.+ +.+.+.+|++++++++++ ||.+
T Consensus 273 ~~~~~~-----------~~-~~d~~~~L~~I-~~PvLvI~G~~D~~~p~~~~~~~~la~~ip~a~l~~i~~a~~~~GH~~ 339 (360)
T PRK06489 273 LYQWDS-----------SR-DYNPSPDLEKI-KAPVLAINSADDERNPPETGVMEAALKRVKHGRLVLIPASPETRGHGT 339 (360)
T ss_pred HHHHHH-----------hh-ccChHHHHHhC-CCCEEEEecCCCcccChhhHHHHHHHHhCcCCeEEEECCCCCCCCccc
Confidence 000000 00 23455688899 69999999999999998875 789999999999999996 9999
Q ss_pred CcCCchhHHHHHHHHHHHhhhc
Q 020067 308 NEPGIAAELVATNEKLKNLIKN 329 (331)
Q Consensus 308 ~~~~~~~~~~~~i~~fl~~~~~ 329 (331)
+ ++ |+++.+.|.+|++.+.+
T Consensus 340 ~-e~-P~~~~~~i~~FL~~~~~ 359 (360)
T PRK06489 340 T-GS-AKFWKAYLAEFLAQVPK 359 (360)
T ss_pred c-cC-HHHHHHHHHHHHHhccc
Confidence 7 65 99999999999988753
No 10
>PRK03204 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=2.6e-34 Score=227.65 Aligned_cols=268 Identities=18% Similarity=0.217 Sum_probs=166.1
Q ss_pred CCCCCccceeEeCCCceEEEEeCCCCCCCcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchH
Q 020067 18 YVEPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTW 97 (331)
Q Consensus 18 ~~~~~~~~~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~ 97 (331)
...+.+..++++.++ +++|...| ++++|||+||++.+...|......+.++|+|+++|+||||.|+.+.. ..++.+
T Consensus 10 ~~~~~~~~~~~~~~~-~i~y~~~G--~~~~iv~lHG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~-~~~~~~ 85 (286)
T PRK03204 10 QLYPFESRWFDSSRG-RIHYIDEG--TGPPILLCHGNPTWSFLYRDIIVALRDRFRCVAPDYLGFGLSERPSG-FGYQID 85 (286)
T ss_pred ccccccceEEEcCCc-EEEEEECC--CCCEEEEECCCCccHHHHHHHHHHHhCCcEEEEECCCCCCCCCCCCc-cccCHH
Confidence 345677788888665 99999988 57899999998765544444444456789999999999999986543 257889
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccC
Q 020067 98 DLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLI 177 (331)
Q Consensus 98 ~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (331)
++++++.++++.++.++++++||||||.+++.++..+|++|+++|++++........ ....+.......
T Consensus 86 ~~~~~~~~~~~~~~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~-----------~~~~~~~~~~~~ 154 (286)
T PRK03204 86 EHARVIGEFVDHLGLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPADTL-----------AMKAFSRVMSSP 154 (286)
T ss_pred HHHHHHHHHHHHhCCCCEEEEEECccHHHHHHHHHhChhheeEEEEECccccCCCch-----------hHHHHHHHhccc
Confidence 999999999999999999999999999999999999999999999987653211000 000011000000
Q ss_pred Ccch----hhhhHHhhccccC-CCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCC
Q 020067 178 PENE----RSCFVDAYSKRLN-SDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFP 252 (331)
Q Consensus 178 ~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (331)
.... ...+...+..... ...... ....+ .. ....+ .....+......+......
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~------~~-~~~~~---------~~~~~~~~~~~~~~~~~~~-- 213 (286)
T PRK03204 155 PVQYAILRRNFFVERLIPAGTEHRPSSA---VMAHY------RA-VQPNA---------AARRGVAEMPKQILAARPL-- 213 (286)
T ss_pred cchhhhhhhhHHHHHhccccccCCCCHH---HHHHh------cC-CCCCH---------HHHHHHHHHHHhcchhhHH--
Confidence 0000 0000011100000 000000 00000 00 00000 0000000000000000000
Q ss_pred Ccchhhhhcc--ccccccEEEEecCCCCccCCc-chHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHH
Q 020067 253 SDSFLLDNID--NIRHINATIVQGRYDVCCPMM-SAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLK 324 (331)
Q Consensus 253 ~~~~~~~~l~--~i~~~P~l~i~G~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl 324 (331)
..+....+. .+ ++|+|+|+|++|.++++. ..+.+.+.+|++++++++++||+++.++ |+++.+.|.+|+
T Consensus 214 -~~~~~~~~~~~~~-~~PtliI~G~~D~~~~~~~~~~~~~~~ip~~~~~~i~~aGH~~~~e~-Pe~~~~~i~~~~ 285 (286)
T PRK03204 214 -LARLAREVPATLG-TKPTLLVWGMKDVAFRPKTILPRLRATFPDHVLVELPNAKHFIQEDA-PDRIAAAIIERF 285 (286)
T ss_pred -HHHhhhhhhhhcC-CCCeEEEecCCCcccCcHHHHHHHHHhcCCCeEEEcCCCcccccccC-HHHHHHHHHHhc
Confidence 001111111 13 499999999999988655 5788999999999999999999999997 999999999997
No 11
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=100.00 E-value=3.1e-34 Score=236.41 Aligned_cols=289 Identities=18% Similarity=0.195 Sum_probs=168.2
Q ss_pred CccceeEeCCCceEEEEeCCCCC---CCcEEEeccCCCCCCCCC-c-ccccC---CCCcEEEEecCCCCCCCCCCCCCCc
Q 020067 22 YSTGILKVSDIHTIYWEQSGNPT---GHPVVFLHGGPGGGTTPS-N-RRFFD---PDFYRIILFDQRGAGKSTPHACLDQ 93 (331)
Q Consensus 22 ~~~~~~~~~~g~~l~~~~~g~~~---~~~vl~~HG~~~~~~~~~-~-~~~~~---~~g~~vi~~D~~G~G~s~~~~~~~~ 93 (331)
....++.+++ .+++|...|+++ +++|||+||++++...|. . ...+. +++|+|+++|+||||.|+.+.. ..
T Consensus 176 ~~~~~~~~~~-~~l~~~~~gp~~~~~k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~-~~ 253 (481)
T PLN03087 176 FCTSWLSSSN-ESLFVHVQQPKDNKAKEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPAD-SL 253 (481)
T ss_pred eeeeeEeeCC-eEEEEEEecCCCCCCCCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCC-Cc
Confidence 3345566666 599999988754 478999999887755543 2 23332 4799999999999999986542 45
Q ss_pred cchHHHHHHHH-HHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHh
Q 020067 94 NTTWDLIDDIE-KLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWES 172 (331)
Q Consensus 94 ~~~~~~~~~~~-~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (331)
++++++++++. .+++.++.++++++||||||.+++.+|.++|++|+++|+++++............ .....
T Consensus 254 ytl~~~a~~l~~~ll~~lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~~~~~~~~--------~~~~~ 325 (481)
T PLN03087 254 YTLREHLEMIERSVLERYKVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYPVPKGVQATQ--------YVMRK 325 (481)
T ss_pred CCHHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccccccchhHHH--------HHHHH
Confidence 88999999994 8999999999999999999999999999999999999999975432111000000 00000
Q ss_pred h--hccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhh---cCCccHHHHHHhhhhhhhhhc
Q 020067 173 F--RDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIK---RGEDDIFSLAFARIENHYFLN 247 (331)
Q Consensus 173 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 247 (331)
. ...............+..................|.................. ..........+... ...
T Consensus 326 ~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~----i~~ 401 (481)
T PLN03087 326 VAPRRVWPPIAFGASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNI----ICG 401 (481)
T ss_pred hcccccCCccccchhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHHHH----Hhc
Confidence 0 00000000000000000000000000000000000000000000000000000 00000000000000 000
Q ss_pred cCCCCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCc-CCchhHHHHHHHHHHHh
Q 020067 248 KGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANE-PGIAAELVATNEKLKNL 326 (331)
Q Consensus 248 ~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~~i~~fl~~ 326 (331)
.. ......+...+.++ ++|+|+|+|++|.++|++.++.+++.+|++++++++++||+++. ++ |+++++.|.+|+++
T Consensus 402 ~~-~~l~~~l~~l~~~I-~vPtLII~Ge~D~ivP~~~~~~la~~iP~a~l~vI~~aGH~~~v~e~-p~~fa~~L~~F~~~ 478 (481)
T PLN03087 402 SG-SKLDGYLDHVRDQL-KCDVAIFHGGDDELIPVECSYAVKAKVPRARVKVIDDKDHITIVVGR-QKEFARELEEIWRR 478 (481)
T ss_pred hh-hhhhhHHHHHHHhC-CCCEEEEEECCCCCCCHHHHHHHHHhCCCCEEEEeCCCCCcchhhcC-HHHHHHHHHHHhhc
Confidence 00 00011122334468 59999999999999999999999999999999999999999885 76 99999999999975
Q ss_pred h
Q 020067 327 I 327 (331)
Q Consensus 327 ~ 327 (331)
-
T Consensus 479 ~ 479 (481)
T PLN03087 479 S 479 (481)
T ss_pred c
Confidence 3
No 12
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=100.00 E-value=3.8e-34 Score=233.35 Aligned_cols=271 Identities=17% Similarity=0.098 Sum_probs=168.3
Q ss_pred CCCccceeEeCCCceEEEEeCCCC---CCCcEEEeccCCCCCC-CC-CcccccCCCCcEEEEecCCCCCCCCCCCCCCcc
Q 020067 20 EPYSTGILKVSDIHTIYWEQSGNP---TGHPVVFLHGGPGGGT-TP-SNRRFFDPDFYRIILFDQRGAGKSTPHACLDQN 94 (331)
Q Consensus 20 ~~~~~~~~~~~~g~~l~~~~~g~~---~~~~vl~~HG~~~~~~-~~-~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~ 94 (331)
...++.++...+|.+++|..++++ .+++|||+||++++.. ++ ..+..+.+.||+|+++|+||||.|+.... ...
T Consensus 59 ~~~~~~~~~~~~g~~l~~~~~~p~~~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~-~~~ 137 (349)
T PLN02385 59 IKTEESYEVNSRGVEIFSKSWLPENSRPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLHG-YIP 137 (349)
T ss_pred cceeeeeEEcCCCCEEEEEEEecCCCCCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCC-CcC
Confidence 345556677788989999888753 3467999999876643 33 45566767899999999999999986542 235
Q ss_pred chHHHHHHHHHHHHHhCCC------cEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChh
Q 020067 95 TTWDLIDDIEKLRQHLEIP------EWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPD 168 (331)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~------~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (331)
+++++++|+.++++.+..+ +++|+||||||.+++.++.++|++++++|+++|......... .......
T Consensus 138 ~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~------~~~~~~~ 211 (349)
T PLN02385 138 SFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVV------PPPLVLQ 211 (349)
T ss_pred CHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEeccccccccccc------CchHHHH
Confidence 7899999999998887542 799999999999999999999999999999998653211000 0000000
Q ss_pred hHHhhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhcc
Q 020067 169 AWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNK 248 (331)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (331)
.........+...... ...+....... .. .. . .... ....... ...+......+
T Consensus 212 ~~~~~~~~~p~~~~~~-~~~~~~~~~~~-~~--~~---~------~~~~---~~~~~~~--~~~~~~~~~~l-------- 265 (349)
T PLN02385 212 ILILLANLLPKAKLVP-QKDLAELAFRD-LK--KR---K------MAEY---NVIAYKD--KPRLRTAVELL-------- 265 (349)
T ss_pred HHHHHHHHCCCceecC-CCccccccccC-HH--HH---H------Hhhc---CcceeCC--CcchHHHHHHH--------
Confidence 0000000000000000 00000000000 00 00 0 0000 0000000 00000000000
Q ss_pred CCCCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhC--CCCcEEEecCCCCCCCcCCchhH----HHHHHHH
Q 020067 249 GFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAW--PEADFKVVADAGHSANEPGIAAE----LVATNEK 322 (331)
Q Consensus 249 ~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~----~~~~i~~ 322 (331)
....+....+.++ ++|+|+|+|++|.++|++.++.+.+.+ +++++++++++||.++.++ |++ +++.|.+
T Consensus 266 ---~~~~~~~~~l~~i-~~P~Lii~G~~D~vv~~~~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~-p~~~~~~v~~~i~~ 340 (349)
T PLN02385 266 ---RTTQEIEMQLEEV-SLPLLILHGEADKVTDPSVSKFLYEKASSSDKKLKLYEDAYHSILEGE-PDEMIFQVLDDIIS 340 (349)
T ss_pred ---HHHHHHHHhcccC-CCCEEEEEeCCCCccChHHHHHHHHHcCCCCceEEEeCCCeeecccCC-ChhhHHHHHHHHHH
Confidence 0012344567788 599999999999999999999999887 5689999999999998876 665 8899999
Q ss_pred HHHhhh
Q 020067 323 LKNLIK 328 (331)
Q Consensus 323 fl~~~~ 328 (331)
||++..
T Consensus 341 wL~~~~ 346 (349)
T PLN02385 341 WLDSHS 346 (349)
T ss_pred HHHHhc
Confidence 998754
No 13
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=100.00 E-value=8.6e-34 Score=225.76 Aligned_cols=271 Identities=16% Similarity=0.106 Sum_probs=170.0
Q ss_pred CccceeEeCCCceEEEEeCCCCCCCcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHH
Q 020067 22 YSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLID 101 (331)
Q Consensus 22 ~~~~~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~ 101 (331)
...+++++ +|.+++|...|++++|+|||+||++++...|......++++|+|+++|+||||.|..+.. ..++++++++
T Consensus 6 ~~~~~~~~-~~~~~~~~~~g~~~~~~vv~~hG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~ 83 (278)
T TIGR03056 6 DCSRRVTV-GPFHWHVQDMGPTAGPLLLLLHGTGASTHSWRDLMPPLARSFRVVAPDLPGHGFTRAPFR-FRFTLPSMAE 83 (278)
T ss_pred CccceeeE-CCEEEEEEecCCCCCCeEEEEcCCCCCHHHHHHHHHHHhhCcEEEeecCCCCCCCCCccc-cCCCHHHHHH
Confidence 34566666 455999999987678999999998776554444444446789999999999999986552 3578999999
Q ss_pred HHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcch
Q 020067 102 DIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENE 181 (331)
Q Consensus 102 ~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (331)
|+.++++.++.++++++||||||.+++.+|.++|++++++|++++......... ....+. +........ .
T Consensus 84 ~l~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~-------~~~~~~-~~~~~~~~~--~ 153 (278)
T TIGR03056 84 DLSALCAAEGLSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMA-------GTLFPY-MARVLACNP--F 153 (278)
T ss_pred HHHHHHHHcCCCCceEEEECccHHHHHHHHHhCCcccceEEEEcCccccccccc-------ccccch-hhHhhhhcc--c
Confidence 999999999999999999999999999999999999999999987543211000 000000 000000000 0
Q ss_pred hhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCC-ChhhhhcC-CccHHHHHHhhhhhhhhhccCCCCCcchhhh
Q 020067 182 RSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLP-NEENIKRG-EDDIFSLAFARIENHYFLNKGFFPSDSFLLD 259 (331)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (331)
....... ........ ..+.. ........ ........ .......... ....... ......
T Consensus 154 ~~~~~~~----~~~~~~~~-----~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~----~~~~~~ 214 (278)
T TIGR03056 154 TPPMMSR----GAADQQRV-----ERLIR--DTGSLLDKAGMTYYGRLIRSPAHVDGAL----SMMAQWD----LAPLNR 214 (278)
T ss_pred chHHHHh----hcccCcch-----hHHhh--ccccccccchhhHHHHhhcCchhhhHHH----HHhhccc----ccchhh
Confidence 0000000 00000000 00000 00000000 00000000 0000000000 0000000 112334
Q ss_pred hccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHH
Q 020067 260 NIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKN 325 (331)
Q Consensus 260 ~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~ 325 (331)
.+.++ ++|+|+|+|++|.++|++..+.+.+.++++++++++++||+++.+. |+++++.|.+|++
T Consensus 215 ~~~~i-~~P~lii~g~~D~~vp~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~-p~~~~~~i~~f~~ 278 (278)
T TIGR03056 215 DLPRI-TIPLHLIAGEEDKAVPPDESKRAATRVPTATLHVVPGGGHLVHEEQ-ADGVVGLILQAAE 278 (278)
T ss_pred hcccC-CCCEEEEEeCCCcccCHHHHHHHHHhccCCeEEEECCCCCcccccC-HHHHHHHHHHHhC
Confidence 67788 5999999999999999999999999999999999999999999997 9999999999984
No 14
>PLN02965 Probable pheophorbidase
Probab=100.00 E-value=2e-34 Score=225.35 Aligned_cols=245 Identities=15% Similarity=0.085 Sum_probs=153.4
Q ss_pred cEEEeccCCCCCCCC-CcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCC-CcEEEEEeChhH
Q 020067 47 PVVFLHGGPGGGTTP-SNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEI-PEWQVFGGSWGS 124 (331)
Q Consensus 47 ~vl~~HG~~~~~~~~-~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~lvG~S~Gg 124 (331)
+|||+||++.+...| ..+..+.+.+|+|+++|+||||.|+.... ..++++++++|+.++++.++. ++++++||||||
T Consensus 5 ~vvllHG~~~~~~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~-~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhSmGG 83 (255)
T PLN02965 5 HFVFVHGASHGAWCWYKLATLLDAAGFKSTCVDLTGAGISLTDSN-TVSSSDQYNRPLFALLSDLPPDHKVILVGHSIGG 83 (255)
T ss_pred EEEEECCCCCCcCcHHHHHHHHhhCCceEEEecCCcCCCCCCCcc-ccCCHHHHHHHHHHHHHhcCCCCCEEEEecCcch
Confidence 499999977665444 44555657899999999999999975542 357899999999999999987 499999999999
Q ss_pred HHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhh-ccccCCCch--HHH
Q 020067 125 TLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAY-SKRLNSDDK--ETQ 201 (331)
Q Consensus 125 ~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~ 201 (331)
.+++.++.++|++|+++|++++......... ...+........ ...... ......... ...
T Consensus 84 ~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~-----------~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 147 (255)
T PLN02965 84 GSVTEALCKFTDKISMAIYVAAAMVKPGSII-----------SPRLKNVMEGTE-----KIWDYTFGEGPDKPPTGIMMK 147 (255)
T ss_pred HHHHHHHHhCchheeEEEEEccccCCCCCCc-----------cHHHHhhhhccc-----cceeeeeccCCCCCcchhhcC
Confidence 9999999999999999999998642111000 000000000000 000000 000000000 000
Q ss_pred HHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCCCccC
Q 020067 202 YAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCP 281 (331)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~ 281 (331)
...... ..... ...+.. .............. ... ..+....+..+ ++|+++|+|++|.++|
T Consensus 148 ~~~~~~-----~~~~~--~~~~~~--------~~~~~~~~~~~~~~--~~~-~~~~~~~~~~i-~vP~lvi~g~~D~~~~ 208 (255)
T PLN02965 148 PEFVRH-----YYYNQ--SPLEDY--------TLSSKLLRPAPVRA--FQD-LDKLPPNPEAE-KVPRVYIKTAKDNLFD 208 (255)
T ss_pred HHHHHH-----HHhcC--CCHHHH--------HHHHHhcCCCCCcc--hhh-hhhccchhhcC-CCCEEEEEcCCCCCCC
Confidence 000000 00000 000000 00000000000000 000 11122245568 6999999999999999
Q ss_pred CcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhhh
Q 020067 282 MMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNLIK 328 (331)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~ 328 (331)
++.++.+.+.+|++++++++++||+++.|+ |+++++.|.+|++.+.
T Consensus 209 ~~~~~~~~~~~~~a~~~~i~~~GH~~~~e~-p~~v~~~l~~~~~~~~ 254 (255)
T PLN02965 209 PVRQDVMVENWPPAQTYVLEDSDHSAFFSV-PTTLFQYLLQAVSSLQ 254 (255)
T ss_pred HHHHHHHHHhCCcceEEEecCCCCchhhcC-HHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999997 9999999999998764
No 15
>PRK10349 carboxylesterase BioH; Provisional
Probab=100.00 E-value=1.7e-34 Score=226.31 Aligned_cols=253 Identities=21% Similarity=0.267 Sum_probs=154.9
Q ss_pred eEEEEeCCCCCCC-cEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCC
Q 020067 34 TIYWEQSGNPTGH-PVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEI 112 (331)
Q Consensus 34 ~l~~~~~g~~~~~-~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (331)
.++|...| +++ +|||+||++++...|......+.++|+|+++|+||||.|.... .++.+++++++.+ +..
T Consensus 3 ~~~y~~~G--~g~~~ivllHG~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~---~~~~~~~~~~l~~----~~~ 73 (256)
T PRK10349 3 NIWWQTKG--QGNVHLVLLHGWGLNAEVWRCIDEELSSHFTLHLVDLPGFGRSRGFG---ALSLADMAEAVLQ----QAP 73 (256)
T ss_pred ccchhhcC--CCCCeEEEECCCCCChhHHHHHHHHHhcCCEEEEecCCCCCCCCCCC---CCCHHHHHHHHHh----cCC
Confidence 36788888 454 6999999877766555444444677999999999999998543 4677777776653 566
Q ss_pred CcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhccc
Q 020067 113 PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKR 192 (331)
Q Consensus 113 ~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (331)
++++++||||||.+++.+|.++|++++++|++++.+.......+ ..........+...+... .......+...
T Consensus 74 ~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 146 (256)
T PRK10349 74 DKAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEW------PGIKPDVLAGFQQQLSDD-FQRTVERFLAL 146 (256)
T ss_pred CCeEEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCCC------CcccHHHHHHHHHHHHhc-hHHHHHHHHHH
Confidence 89999999999999999999999999999999875432110000 000000000000000000 00001111000
Q ss_pred cCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEE
Q 020067 193 LNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIV 272 (331)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i 272 (331)
........ ......+.. .......... ......+.. + . ..+....+.++ ++|+|+|
T Consensus 147 ~~~~~~~~-~~~~~~~~~--~~~~~~~~~~--------~~~~~~~~~-----~------~-~~~~~~~l~~i-~~P~lii 202 (256)
T PRK10349 147 QTMGTETA-RQDARALKK--TVLALPMPEV--------DVLNGGLEI-----L------K-TVDLRQPLQNV-SMPFLRL 202 (256)
T ss_pred HHccCchH-HHHHHHHHH--HhhccCCCcH--------HHHHHHHHH-----H------H-hCccHHHHhhc-CCCeEEE
Confidence 00000000 000000000 0000000000 000000000 0 0 22455678889 6999999
Q ss_pred ecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhh
Q 020067 273 QGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNLI 327 (331)
Q Consensus 273 ~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 327 (331)
+|++|.++|.+.++.+.+.++++++++++++||+++.++ |+++.+.|.+|-+++
T Consensus 203 ~G~~D~~~~~~~~~~~~~~i~~~~~~~i~~~gH~~~~e~-p~~f~~~l~~~~~~~ 256 (256)
T PRK10349 203 YGYLDGLVPRKVVPMLDKLWPHSESYIFAKAAHAPFISH-PAEFCHLLVALKQRV 256 (256)
T ss_pred ecCCCccCCHHHHHHHHHhCCCCeEEEeCCCCCCccccC-HHHHHHHHHHHhccC
Confidence 999999999999999999999999999999999999997 999999999997653
No 16
>PLN02578 hydrolase
Probab=100.00 E-value=2e-33 Score=229.08 Aligned_cols=278 Identities=13% Similarity=0.115 Sum_probs=168.5
Q ss_pred ceeEeCCCceEEEEeCCCCCCCcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHH
Q 020067 25 GILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIE 104 (331)
Q Consensus 25 ~~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~ 104 (331)
.++... |.+++|...| ++++|||+||++++...|......+.++|+|+++|+||||.|+.+. ..++.+.+++++.
T Consensus 69 ~~~~~~-~~~i~Y~~~g--~g~~vvliHG~~~~~~~w~~~~~~l~~~~~v~~~D~~G~G~S~~~~--~~~~~~~~a~~l~ 143 (354)
T PLN02578 69 NFWTWR-GHKIHYVVQG--EGLPIVLIHGFGASAFHWRYNIPELAKKYKVYALDLLGFGWSDKAL--IEYDAMVWRDQVA 143 (354)
T ss_pred eEEEEC-CEEEEEEEcC--CCCeEEEECCCCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCCcc--cccCHHHHHHHHH
Confidence 344444 5589999988 5789999999877655444433444678999999999999998765 4688999999999
Q ss_pred HHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhh
Q 020067 105 KLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSC 184 (331)
Q Consensus 105 ~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (331)
++++.+..++++++|||+||.+++.+|.++|++++++|++++............. ... .....+... .... ...
T Consensus 144 ~~i~~~~~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~-~~~-~~~~~~~~~---~~~~-~~~ 217 (354)
T PLN02578 144 DFVKEVVKEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEE-AIV-VEETVLTRF---VVKP-LKE 217 (354)
T ss_pred HHHHHhccCCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCcccccccccccc-ccc-cccchhhHH---HhHH-HHH
Confidence 9999999899999999999999999999999999999999875432211000000 000 000000000 0000 000
Q ss_pred hHHhhccc---cCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhc----CCccHHHHHHhhhhhhhhhccCCCCCcchh
Q 020067 185 FVDAYSKR---LNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKR----GEDDIFSLAFARIENHYFLNKGFFPSDSFL 257 (331)
Q Consensus 185 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (331)
........ .............. ................ .........+......+.. .....+.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 288 (354)
T PLN02578 218 WFQRVVLGFLFWQAKQPSRIESVLK-----SVYKDKSNVDDYLVESITEPAADPNAGEVYYRLMSRFLF----NQSRYTL 288 (354)
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHH-----HhcCCcccCCHHHHHHHHhcccCCchHHHHHHHHHHHhc----CCCCCCH
Confidence 00000000 00000000000000 0000000000000000 0000000111111000000 0112334
Q ss_pred hhhccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHH
Q 020067 258 LDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKN 325 (331)
Q Consensus 258 ~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~ 325 (331)
.+.+.++ ++|+++|+|++|.++|.+.++.+.+.+|+++++++ ++||+++.++ |+++++.|.+|++
T Consensus 289 ~~~l~~i-~~PvLiI~G~~D~~v~~~~~~~l~~~~p~a~l~~i-~~GH~~~~e~-p~~~~~~I~~fl~ 353 (354)
T PLN02578 289 DSLLSKL-SCPLLLLWGDLDPWVGPAKAEKIKAFYPDTTLVNL-QAGHCPHDEV-PEQVNKALLEWLS 353 (354)
T ss_pred HHHhhcC-CCCEEEEEeCCCCCCCHHHHHHHHHhCCCCEEEEe-CCCCCccccC-HHHHHHHHHHHHh
Confidence 5678889 69999999999999999999999999999999999 5999999997 9999999999985
No 17
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=100.00 E-value=7e-33 Score=224.44 Aligned_cols=269 Identities=17% Similarity=0.144 Sum_probs=166.9
Q ss_pred ceeEeCCCceEEEEeCCCCCCCcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCC--CccchHHHHHH
Q 020067 25 GILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACL--DQNTTWDLIDD 102 (331)
Q Consensus 25 ~~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~--~~~~~~~~~~~ 102 (331)
+.....+|.+++|...|+.++++|||+||++++...|..+...++++|+|+++|+||||.|+.+... ..+++++++++
T Consensus 107 ~~~~~~~~~~~~y~~~G~~~~~~ivllHG~~~~~~~w~~~~~~L~~~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~ 186 (383)
T PLN03084 107 QSQASSDLFRWFCVESGSNNNPPVLLIHGFPSQAYSYRKVLPVLSKNYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSS 186 (383)
T ss_pred eeEEcCCceEEEEEecCCCCCCeEEEECCCCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCCCcccccccCCHHHHHHH
Confidence 4444578889999999976789999999987765544433344467899999999999999876431 25799999999
Q ss_pred HHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCC----
Q 020067 103 IEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIP---- 178 (331)
Q Consensus 103 ~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 178 (331)
+..+++.++.++++|+|||+||.+++.+|.++|++|+++|+++++...... ..+..+..+...+.
T Consensus 187 l~~~i~~l~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~-----------~~p~~l~~~~~~l~~~~~ 255 (383)
T PLN03084 187 LESLIDELKSDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHA-----------KLPSTLSEFSNFLLGEIF 255 (383)
T ss_pred HHHHHHHhCCCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCccccc-----------cchHHHHHHHHHHhhhhh
Confidence 999999999999999999999999999999999999999999986432100 00000000000000
Q ss_pred cchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhh
Q 020067 179 ENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLL 258 (331)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (331)
................ .... .......+ .... ..+.. ....+......+.. . ......+..
T Consensus 256 ~~~~~~~~~~~~~~~~-~~~~-~~e~~~~~------~~~~-~~~~~----~~~~l~~~~r~~~~----~--l~~~~~~l~ 316 (383)
T PLN03084 256 SQDPLRASDKALTSCG-PYAM-KEDDAMVY------RRPY-LTSGS----SGFALNAISRSMKK----E--LKKYIEEMR 316 (383)
T ss_pred hcchHHHHhhhhcccC-ccCC-CHHHHHHH------hccc-cCCcc----hHHHHHHHHHHhhc----c--cchhhHHHH
Confidence 0000000000000000 0000 00000000 0000 00000 00000000000000 0 000001111
Q ss_pred hhc--cccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHh
Q 020067 259 DNI--DNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNL 326 (331)
Q Consensus 259 ~~l--~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 326 (331)
..+ .++ ++|+|+|+|++|.+++.+.++.+.+. +++++++++++||+++.|. |+++++.|.+|+++
T Consensus 317 ~~l~~~~i-~vPvLiI~G~~D~~v~~~~~~~~a~~-~~a~l~vIp~aGH~~~~E~-Pe~v~~~I~~Fl~~ 383 (383)
T PLN03084 317 SILTDKNW-KTPITVCWGLRDRWLNYDGVEDFCKS-SQHKLIELPMAGHHVQEDC-GEELGGIISGILSK 383 (383)
T ss_pred hhhccccC-CCCEEEEeeCCCCCcCHHHHHHHHHh-cCCeEEEECCCCCCcchhC-HHHHHHHHHHHhhC
Confidence 111 357 59999999999999999888888887 5899999999999999997 99999999999863
No 18
>PRK07581 hypothetical protein; Validated
Probab=100.00 E-value=1.5e-33 Score=229.39 Aligned_cols=282 Identities=16% Similarity=0.130 Sum_probs=159.8
Q ss_pred CCceEEEEeCCCC--CC-CcEEEeccCCCCCCCCCcc----cccCCCCcEEEEecCCCCCCCCCCCCC-CccchH-----
Q 020067 31 DIHTIYWEQSGNP--TG-HPVVFLHGGPGGGTTPSNR----RFFDPDFYRIILFDQRGAGKSTPHACL-DQNTTW----- 97 (331)
Q Consensus 31 ~g~~l~~~~~g~~--~~-~~vl~~HG~~~~~~~~~~~----~~~~~~g~~vi~~D~~G~G~s~~~~~~-~~~~~~----- 97 (331)
+|.+++|...|+. .+ |+||++||++++..++... ..+..++|+||++|+||||.|..+... ..++++
T Consensus 24 ~~~~l~y~~~G~~~~~~~~~vll~~~~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~ 103 (339)
T PRK07581 24 PDARLAYKTYGTLNAAKDNAILYPTWYSGTHQDNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFPHV 103 (339)
T ss_pred CCceEEEEecCccCCCCCCEEEEeCCCCCCcccchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCCce
Confidence 4568999999852 23 4566666666554444322 355567999999999999999855421 123332
Q ss_pred HHHHHHHH----HHHHhCCCc-EEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccC-ChhhHH
Q 020067 98 DLIDDIEK----LRQHLEIPE-WQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAI-YPDAWE 171 (331)
Q Consensus 98 ~~~~~~~~----~~~~~~~~~-v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 171 (331)
.+++|+.. +++++++++ ++||||||||++++.+|.++|++|+++|++++..................+ ....|.
T Consensus 104 ~~~~~~~~~~~~l~~~lgi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 183 (339)
T PRK07581 104 TIYDNVRAQHRLLTEKFGIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAKTTPHNFVFLEGLKAALTADPAFN 183 (339)
T ss_pred eHHHHHHHHHHHHHHHhCCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCCCCHHHHHHHHHHHHHHHhCCCCC
Confidence 24555554 778899999 579999999999999999999999999999876542211100000000000 000000
Q ss_pred h-hhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCC-hhhhh--------cCCccHHHHHHhhhh
Q 020067 172 S-FRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPN-EENIK--------RGEDDIFSLAFARIE 241 (331)
Q Consensus 172 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--------~~~~~~~~~~~~~~~ 241 (331)
. .....+..........+.... ....+............. +.... ......+...+....
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 253 (339)
T PRK07581 184 GGWYAEPPERGLRAHARVYAGWG----------FSQAFYRQELWRAMGYASLEDFLVGFWEGNFLPRDPNNLLAMLWTWQ 253 (339)
T ss_pred CCCCCCcHHHHHHHHHHHHHHHH----------hHHHHHHhhhccccChhhHHHHHHHHHHHhhcccCcccHHHHHHHhh
Confidence 0 000000000000000000000 000000000000000000 00000 000001111110000
Q ss_pred hhhhhccCCCCC---cchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecC-CCCCCCcCCchhHHH
Q 020067 242 NHYFLNKGFFPS---DSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVAD-AGHSANEPGIAAELV 317 (331)
Q Consensus 242 ~~~~~~~~~~~~---~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~ 317 (331)
. ...... ..+..+.+.+| ++|+|+|+|++|..+|++.++.+.+.+|+++++++++ +||+.+.++ ++++.
T Consensus 254 ~-----~~~~~~~~~~~d~~~~L~~I-~~PtLvI~G~~D~~~p~~~~~~l~~~ip~a~l~~i~~~~GH~~~~~~-~~~~~ 326 (339)
T PRK07581 254 R-----GDISRNPAYGGDLAAALGSI-TAKTFVMPISTDLYFPPEDCEAEAALIPNAELRPIESIWGHLAGFGQ-NPADI 326 (339)
T ss_pred h-----cccccCcccCCCHHHHHhcC-CCCEEEEEeCCCCCCCHHHHHHHHHhCCCCeEEEeCCCCCccccccC-cHHHH
Confidence 0 000000 12456788899 5999999999999999999999999999999999998 999999997 99999
Q ss_pred HHHHHHHHhhhc
Q 020067 318 ATNEKLKNLIKN 329 (331)
Q Consensus 318 ~~i~~fl~~~~~ 329 (331)
+.|.+|++++.+
T Consensus 327 ~~~~~~~~~~~~ 338 (339)
T PRK07581 327 AFIDAALKELLA 338 (339)
T ss_pred HHHHHHHHHHHh
Confidence 999999998764
No 19
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=100.00 E-value=1.6e-33 Score=221.77 Aligned_cols=254 Identities=17% Similarity=0.237 Sum_probs=162.5
Q ss_pred EEEEeCCC--CCCCcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCC
Q 020067 35 IYWEQSGN--PTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEI 112 (331)
Q Consensus 35 l~~~~~g~--~~~~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (331)
++|...|+ +++|+||++||++++..+|......+.++|+|+++|+||||.|..... ..++++++++++.++++.++.
T Consensus 1 ~~~~~~~~~~~~~~~iv~lhG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~~~~~i~~~~~ 79 (257)
T TIGR03611 1 MHYELHGPPDADAPVVVLSSGLGGSGSYWAPQLDVLTQRFHVVTYDHRGTGRSPGELP-PGYSIAHMADDVLQLLDALNI 79 (257)
T ss_pred CEEEEecCCCCCCCEEEEEcCCCcchhHHHHHHHHHHhccEEEEEcCCCCCCCCCCCc-ccCCHHHHHHHHHHHHHHhCC
Confidence 35666775 457889999998877666554444556789999999999999986432 457899999999999999999
Q ss_pred CcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhccc
Q 020067 113 PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKR 192 (331)
Q Consensus 113 ~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (331)
++++++||||||.+++.++.++|++++++|++++............. .. ......... ..+.......
T Consensus 80 ~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~~~~~--------~~-~~~~~~~~~---~~~~~~~~~~ 147 (257)
T TIGR03611 80 ERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPDPHTRRCFD--------VR-IALLQHAGP---EAYVHAQALF 147 (257)
T ss_pred CcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCCChhHHHHHH--------HH-HHHHhccCc---chhhhhhhhh
Confidence 99999999999999999999999999999999875432111000000 00 000000000 0000000000
Q ss_pred cCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcC-CccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEE
Q 020067 193 LNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRG-EDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATI 271 (331)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~ 271 (331)
.... .|.... ............... ....+...+.... ..+....+.++ ++|+++
T Consensus 148 ~~~~----------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~i-~~P~l~ 203 (257)
T TIGR03611 148 LYPA----------DWISEN-AARLAADEAHALAHFPGKANVLRRINALE------------AFDVSARLDRI-QHPVLL 203 (257)
T ss_pred hccc----------cHhhcc-chhhhhhhhhcccccCccHHHHHHHHHHH------------cCCcHHHhccc-CccEEE
Confidence 0000 000000 000000000000000 0000000000000 22344567888 599999
Q ss_pred EecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHh
Q 020067 272 VQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNL 326 (331)
Q Consensus 272 i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 326 (331)
++|++|.++|++.++.+.+.+++++++.++++||.++.++ ++++.+.|.+|+++
T Consensus 204 i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~-~~~~~~~i~~fl~~ 257 (257)
T TIGR03611 204 IANRDDMLVPYTQSLRLAAALPNAQLKLLPYGGHASNVTD-PETFNRALLDFLKT 257 (257)
T ss_pred EecCcCcccCHHHHHHHHHhcCCceEEEECCCCCCccccC-HHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999986 99999999999863
No 20
>PRK10673 acyl-CoA esterase; Provisional
Probab=100.00 E-value=3.6e-33 Score=219.13 Aligned_cols=240 Identities=17% Similarity=0.150 Sum_probs=154.0
Q ss_pred CCCCCcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCcEEEEEeC
Q 020067 42 NPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGS 121 (331)
Q Consensus 42 ~~~~~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG~S 121 (331)
+.++|+|||+||++++...|......+.++|+|+++|+||||.|.... .++++++++|+.++++.++.++++++|||
T Consensus 13 ~~~~~~iv~lhG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~s~~~~---~~~~~~~~~d~~~~l~~l~~~~~~lvGhS 89 (255)
T PRK10673 13 PHNNSPIVLVHGLFGSLDNLGVLARDLVNDHDIIQVDMRNHGLSPRDP---VMNYPAMAQDLLDTLDALQIEKATFIGHS 89 (255)
T ss_pred CCCCCCEEEECCCCCchhHHHHHHHHHhhCCeEEEECCCCCCCCCCCC---CCCHHHHHHHHHHHHHHcCCCceEEEEEC
Confidence 346789999999877755554444444678999999999999998654 57899999999999999999999999999
Q ss_pred hhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccC--CcchhhhhHHhhccccCCCchH
Q 020067 122 WGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLI--PENERSCFVDAYSKRLNSDDKE 199 (331)
Q Consensus 122 ~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 199 (331)
|||.+++.+|.++|++|+++|++++.+...... .....+....... ...........+...+. .. .
T Consensus 90 ~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~ 157 (255)
T PRK10673 90 MGGKAVMALTALAPDRIDKLVAIDIAPVDYHVR----------RHDEIFAAINAVSEAGATTRQQAAAIMRQHLN-EE-G 157 (255)
T ss_pred HHHHHHHHHHHhCHhhcceEEEEecCCCCccch----------hhHHHHHHHHHhhhcccccHHHHHHHHHHhcC-CH-H
Confidence 999999999999999999999998643211000 0000000000000 00000000000000000 00 0
Q ss_pred HHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCCCc
Q 020067 200 TQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVC 279 (331)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~ 279 (331)
... ......... .. ..........+. .....+.+.++ ++|+|+|+|++|..
T Consensus 158 -----~~~-----~~~~~~~~~-~~--~~~~~~~~~~~~---------------~~~~~~~~~~~-~~P~l~i~G~~D~~ 208 (255)
T PRK10673 158 -----VIQ-----FLLKSFVDG-EW--RFNVPVLWDQYP---------------HIVGWEKIPAW-PHPALFIRGGNSPY 208 (255)
T ss_pred -----HHH-----HHHhcCCcc-ee--EeeHHHHHHhHH---------------HHhCCcccCCC-CCCeEEEECCCCCC
Confidence 000 000000000 00 000000000000 00011345677 59999999999999
Q ss_pred cCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHh
Q 020067 280 CPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNL 326 (331)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 326 (331)
++.+..+.+.+.+|++++++++++||+++.++ |+++++.|.+|++.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~-p~~~~~~l~~fl~~ 254 (255)
T PRK10673 209 VTEAYRDDLLAQFPQARAHVIAGAGHWVHAEK-PDAVLRAIRRYLND 254 (255)
T ss_pred CCHHHHHHHHHhCCCcEEEEeCCCCCeeeccC-HHHHHHHHHHHHhc
Confidence 99999999999999999999999999999997 99999999999964
No 21
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=3.8e-32 Score=220.54 Aligned_cols=266 Identities=14% Similarity=0.098 Sum_probs=167.1
Q ss_pred CCCCCccceeEeCCCceEEEEeCCCC----CCCcEEEeccCCCCCCC--CCcccccCCCCcEEEEecCCCCCCCCCCCCC
Q 020067 18 YVEPYSTGILKVSDIHTIYWEQSGNP----TGHPVVFLHGGPGGGTT--PSNRRFFDPDFYRIILFDQRGAGKSTPHACL 91 (331)
Q Consensus 18 ~~~~~~~~~~~~~~g~~l~~~~~g~~----~~~~vl~~HG~~~~~~~--~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~ 91 (331)
.....+..+++..||.+++|+.++++ .+++|||+||++.+..+ ......+.++||+|+++|+||||.|.....
T Consensus 28 ~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~~- 106 (330)
T PLN02298 28 KGIKGSKSFFTSPRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLRA- 106 (330)
T ss_pred cCCccccceEEcCCCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCccc-
Confidence 34556677889999999999877542 23469999998655333 223445667899999999999999975432
Q ss_pred CccchHHHHHHHHHHHHHhCC------CcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccC
Q 020067 92 DQNTTWDLIDDIEKLRQHLEI------PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAI 165 (331)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~------~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~ 165 (331)
...+++.+++|+.++++.+.. .+++|+||||||.+++.++.++|++|+++|++++......... ..
T Consensus 107 ~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~--------~~ 178 (330)
T PLN02298 107 YVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIR--------PP 178 (330)
T ss_pred cCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCCcccC--------Cc
Confidence 235788999999999998753 3799999999999999999999999999999998653211000 00
Q ss_pred ChhhHHhhhccCCcchhhhhHHhhccccCCCchH------HHHHHHHHhhhHHHhhhcCCCChhhhhcCCc-cHHHHHHh
Q 020067 166 YPDAWESFRDLIPENERSCFVDAYSKRLNSDDKE------TQYAAARAWTKWEMMTAHLLPNEENIKRGED-DIFSLAFA 238 (331)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 238 (331)
.+ .... ..+...+.......... ........... . ++........ ......+.
T Consensus 179 ~~--~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-----~~~~~~~~~~~~~~~~~~~ 238 (330)
T PLN02298 179 WP--IPQI---------LTFVARFLPTLAIVPTADLLEKSVKVPAKKIIAK----R-----NPMRYNGKPRLGTVVELLR 238 (330)
T ss_pred hH--HHHH---------HHHHHHHCCCCccccCCCcccccccCHHHHHHHH----h-----CccccCCCccHHHHHHHHH
Confidence 00 0000 00000111100000000 00000000000 0 0000000000 00000000
Q ss_pred hhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhC--CCCcEEEecCCCCCCCcCCch---
Q 020067 239 RIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAW--PEADFKVVADAGHSANEPGIA--- 313 (331)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~--- 313 (331)
. .....+.+.++ ++|+|+|+|++|.++|++.++.+.+.+ +++++++++++||.++.++ |
T Consensus 239 ~--------------~~~~~~~l~~i-~~PvLii~G~~D~ivp~~~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~-pd~~ 302 (330)
T PLN02298 239 V--------------TDYLGKKLKDV-SIPFIVLHGSADVVTDPDVSRALYEEAKSEDKTIKIYDGMMHSLLFGE-PDEN 302 (330)
T ss_pred H--------------HHHHHHhhhhc-CCCEEEEecCCCCCCCHHHHHHHHHHhccCCceEEEcCCcEeeeecCC-CHHH
Confidence 0 11234567788 699999999999999999999998887 4789999999999998764 4
Q ss_pred -hHHHHHHHHHHHhhh
Q 020067 314 -AELVATNEKLKNLIK 328 (331)
Q Consensus 314 -~~~~~~i~~fl~~~~ 328 (331)
+.+.+.|.+|+++..
T Consensus 303 ~~~~~~~i~~fl~~~~ 318 (330)
T PLN02298 303 IEIVRRDILSWLNERC 318 (330)
T ss_pred HHHHHHHHHHHHHHhc
Confidence 568888999998754
No 22
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=100.00 E-value=5.2e-33 Score=217.96 Aligned_cols=249 Identities=18% Similarity=0.199 Sum_probs=161.3
Q ss_pred eEEEEeCCCC-CCCcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCC
Q 020067 34 TIYWEQSGNP-TGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEI 112 (331)
Q Consensus 34 ~l~~~~~g~~-~~~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (331)
+++|...|++ ++|+||++||++.+...|......+..+|+|+++|+||||.|.... ..++++++++++.++++.++.
T Consensus 1 ~~~~~~~g~~~~~~~li~~hg~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~--~~~~~~~~~~~~~~~i~~~~~ 78 (251)
T TIGR02427 1 RLHYRLDGAADGAPVLVFINSLGTDLRMWDPVLPALTPDFRVLRYDKRGHGLSDAPE--GPYSIEDLADDVLALLDHLGI 78 (251)
T ss_pred CceEEeecCCCCCCeEEEEcCcccchhhHHHHHHHhhcccEEEEecCCCCCCCCCCC--CCCCHHHHHHHHHHHHHHhCC
Confidence 3677777865 5678999999776655544333444679999999999999997654 457899999999999999999
Q ss_pred CcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhcc-
Q 020067 113 PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSK- 191 (331)
Q Consensus 113 ~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 191 (331)
++++++|||+||.+++.+|.++|++++++|+++++........+... ...................+..
T Consensus 79 ~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~ 148 (251)
T TIGR02427 79 ERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPESWNAR----------IAAVRAEGLAALADAVLERWFTP 148 (251)
T ss_pred CceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCchhhHHHH----------HhhhhhccHHHHHHHHHHHHccc
Confidence 99999999999999999999999999999999875432111000000 0000000000000000000000
Q ss_pred ccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEE
Q 020067 192 RLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATI 271 (331)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~ 271 (331)
.+...... .. ..+... ........+...... .. ..+....+.++ ++|+++
T Consensus 149 ~~~~~~~~-~~---~~~~~~-------------~~~~~~~~~~~~~~~-----------~~-~~~~~~~~~~~-~~Pvli 198 (251)
T TIGR02427 149 GFREAHPA-RL---DLYRNM-------------LVRQPPDGYAGCCAA-----------IR-DADFRDRLGAI-AVPTLC 198 (251)
T ss_pred ccccCChH-HH---HHHHHH-------------HHhcCHHHHHHHHHH-----------Hh-cccHHHHhhhc-CCCeEE
Confidence 00000000 00 000000 000000000000000 00 22344567788 599999
Q ss_pred EecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHH
Q 020067 272 VQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKN 325 (331)
Q Consensus 272 i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~ 325 (331)
++|++|.++|.+..+.+.+.+++.++++++++||+++.+. ++++.+.|.+|++
T Consensus 199 i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~-p~~~~~~i~~fl~ 251 (251)
T TIGR02427 199 IAGDQDGSTPPELVREIADLVPGARFAEIRGAGHIPCVEQ-PEAFNAALRDFLR 251 (251)
T ss_pred EEeccCCcCChHHHHHHHHhCCCceEEEECCCCCcccccC-hHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999987 9999999999974
No 23
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=100.00 E-value=2.3e-32 Score=222.23 Aligned_cols=276 Identities=20% Similarity=0.205 Sum_probs=160.8
Q ss_pred CccceeEeCCCceEEEEeCCCCCCCcEEEeccCCCCCC------------CCC-ccc---ccCCCCcEEEEecCCCCCCC
Q 020067 22 YSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGT------------TPS-NRR---FFDPDFYRIILFDQRGAGKS 85 (331)
Q Consensus 22 ~~~~~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~------------~~~-~~~---~~~~~g~~vi~~D~~G~G~s 85 (331)
+...+..+ +|.+++|...|+ .++++||+||+.++.. ||. .+. .+..++|+||++|+||||.|
T Consensus 36 ~~~~~~~~-~~~~l~y~~~G~-~~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s 113 (343)
T PRK08775 36 LSMRHAGL-EDLRLRYELIGP-AGAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGS 113 (343)
T ss_pred eeecCCCC-CCceEEEEEecc-CCCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCC
Confidence 33344445 566999999985 2556777777554433 454 333 34457899999999999988
Q ss_pred CCCCCCCccchHHHHHHHHHHHHHhCCCcE-EEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhh-c-cc
Q 020067 86 TPHACLDQNTTWDLIDDIEKLRQHLEIPEW-QVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYE-G-GA 162 (331)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~-~-~~ 162 (331)
.. ..++.+++++|+.++++.++++++ +++||||||++++.+|.++|++|+++|++++............. . ..
T Consensus 114 ~~----~~~~~~~~a~dl~~ll~~l~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~~~~~~~~~~~~~~~ 189 (343)
T PRK08775 114 LD----VPIDTADQADAIALLLDALGIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHRAHPYAAAWRALQRRA 189 (343)
T ss_pred CC----CCCCHHHHHHHHHHHHHHcCCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECccccCCHHHHHHHHHHHHH
Confidence 53 246788999999999999999775 79999999999999999999999999999986532111000000 0 00
Q ss_pred ccCC-----h-hhHHhhh--ccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHH
Q 020067 163 AAIY-----P-DAWESFR--DLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFS 234 (331)
Q Consensus 163 ~~~~-----~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (331)
.... . ....... ..........+...+............ .....+..... ...........+.
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~--------~~~~~~~~~~~~~ 260 (343)
T PRK08775 190 VALGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVR-VAAEDYLDAAG--------AQYVARTPVNAYL 260 (343)
T ss_pred HHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCcc-chHHHHHHHHH--------HHHHHhcChhHHH
Confidence 0000 0 0000000 000000000000000000000000000 00000000000 0000000000000
Q ss_pred HHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhC-CCCcEEEecC-CCCCCCcCCc
Q 020067 235 LAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAW-PEADFKVVAD-AGHSANEPGI 312 (331)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~-~~~~~~~~~~-~gH~~~~~~~ 312 (331)
...... . .....+.+| ++|+|+|+|++|.++|++.++.+.+.+ |+++++++++ +||.++.|+
T Consensus 261 ~~~~~~-------------~-~~~~~l~~I-~~PtLvi~G~~D~~~p~~~~~~~~~~i~p~a~l~~i~~~aGH~~~lE~- 324 (343)
T PRK08775 261 RLSESI-------------D-LHRVDPEAI-RVPTVVVAVEGDRLVPLADLVELAEGLGPRGSLRVLRSPYGHDAFLKE- 324 (343)
T ss_pred HHHHHH-------------h-hcCCChhcC-CCCeEEEEeCCCEeeCHHHHHHHHHHcCCCCeEEEEeCCccHHHHhcC-
Confidence 000000 0 001236788 599999999999999998889999888 7999999985 999999997
Q ss_pred hhHHHHHHHHHHHhhh
Q 020067 313 AAELVATNEKLKNLIK 328 (331)
Q Consensus 313 ~~~~~~~i~~fl~~~~ 328 (331)
|+++.+.|.+||++..
T Consensus 325 Pe~~~~~l~~FL~~~~ 340 (343)
T PRK08775 325 TDRIDAILTTALRSTG 340 (343)
T ss_pred HHHHHHHHHHHHHhcc
Confidence 9999999999998764
No 24
>PRK10749 lysophospholipase L2; Provisional
Probab=100.00 E-value=2.3e-32 Score=220.87 Aligned_cols=276 Identities=12% Similarity=0.056 Sum_probs=168.5
Q ss_pred CCccceeEeCCCceEEEEeCCC-CCCCcEEEeccCCCCC-CCCCcccccCCCCcEEEEecCCCCCCCCCCCCC----Ccc
Q 020067 21 PYSTGILKVSDIHTIYWEQSGN-PTGHPVVFLHGGPGGG-TTPSNRRFFDPDFYRIILFDQRGAGKSTPHACL----DQN 94 (331)
Q Consensus 21 ~~~~~~~~~~~g~~l~~~~~g~-~~~~~vl~~HG~~~~~-~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~----~~~ 94 (331)
..++.++...+|.+++|..+++ ..+++||++||++++. .|..++..+++.||+|+++|+||||.|+..... ...
T Consensus 29 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~vll~HG~~~~~~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~ 108 (330)
T PRK10749 29 QREEAEFTGVDDIPIRFVRFRAPHHDRVVVICPGRIESYVKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHVE 108 (330)
T ss_pred hccceEEEcCCCCEEEEEEccCCCCCcEEEEECCccchHHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCccc
Confidence 3455666777888999999875 3457899999987664 456667677789999999999999999754211 125
Q ss_pred chHHHHHHHHHHHHHh----CCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhh-hHhhcccccCChhh
Q 020067 95 TTWDLIDDIEKLRQHL----EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEID-WFYEGGAAAIYPDA 169 (331)
Q Consensus 95 ~~~~~~~~~~~~~~~~----~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 169 (331)
+++++++|+..+++.+ +..+++++||||||.+++.++.++|++++++|+++|......... ..... .. .
T Consensus 109 ~~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~-----~~-~ 182 (330)
T PRK10749 109 RFNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPLPSWMARR-----IL-N 182 (330)
T ss_pred cHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCCCcHHHHH-----HH-H
Confidence 7899999999999886 567999999999999999999999999999999988643211000 00000 00 0
Q ss_pred HHhhhccCCcc---hhhhhHH-hhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhh-cCCccHHHHHHhhhhhhh
Q 020067 170 WESFRDLIPEN---ERSCFVD-AYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIK-RGEDDIFSLAFARIENHY 244 (331)
Q Consensus 170 ~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 244 (331)
+.......... ....... .+................+.+. . ++.... .............
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~------~----~~~~~~~~~~~~~~~~~~~~----- 247 (330)
T PRK10749 183 WAEGHPRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYA------D----DPELRVGGPTYHWVRESILA----- 247 (330)
T ss_pred HHHHhcCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHH------h----CCCcccCCCcHHHHHHHHHH-----
Confidence 00000000000 0000000 0000000000000000000000 0 000000 0000000000000
Q ss_pred hhccCCCCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhC-------CCCcEEEecCCCCCCCcCCc--hhH
Q 020067 245 FLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAW-------PEADFKVVADAGHSANEPGI--AAE 315 (331)
Q Consensus 245 ~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~-------~~~~~~~~~~~gH~~~~~~~--~~~ 315 (331)
.......+.++ ++|+|+|+|++|.+++++.++.+.+.+ +++++++++|+||.++.|.. .+.
T Consensus 248 ---------~~~~~~~~~~i-~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~ 317 (330)
T PRK10749 248 ---------GEQVLAGAGDI-TTPLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSV 317 (330)
T ss_pred ---------HHHHHhhccCC-CCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHH
Confidence 11233456788 599999999999999999888888866 35689999999999988763 577
Q ss_pred HHHHHHHHHHhh
Q 020067 316 LVATNEKLKNLI 327 (331)
Q Consensus 316 ~~~~i~~fl~~~ 327 (331)
+.+.|.+|+++.
T Consensus 318 v~~~i~~fl~~~ 329 (330)
T PRK10749 318 ALNAIVDFFNRH 329 (330)
T ss_pred HHHHHHHHHhhc
Confidence 999999999764
No 25
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=100.00 E-value=5.3e-32 Score=214.54 Aligned_cols=285 Identities=19% Similarity=0.140 Sum_probs=166.8
Q ss_pred CccceeEeCCCc-eEEEEeCCCC---------CCCcEEEeccCCCCCCCCC-cccccCCC-CcEEEEecCCCCCCCCCCC
Q 020067 22 YSTGILKVSDIH-TIYWEQSGNP---------TGHPVVFLHGGPGGGTTPS-NRRFFDPD-FYRIILFDQRGAGKSTPHA 89 (331)
Q Consensus 22 ~~~~~~~~~~g~-~l~~~~~g~~---------~~~~vl~~HG~~~~~~~~~-~~~~~~~~-g~~vi~~D~~G~G~s~~~~ 89 (331)
.....++...|. ++.....|.. ++++||++|||+++...|. .+..+... |++|+++|++|+|.+...+
T Consensus 25 ~~~~~i~~~~g~~~~~~~w~~~~~~~~~~~~~~~~pvlllHGF~~~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~ 104 (326)
T KOG1454|consen 25 LRSTSIEIPWGPLTIRSKWIPNLDKYGSPGDKDKPPVLLLHGFGASSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLP 104 (326)
T ss_pred ccceEEEcccCCceeEEEEeccceeccCCCCCCCCcEEEeccccCCcccHhhhccccccccceEEEEEecCCCCcCCCCC
Confidence 344555666663 4444444433 6889999999877655444 44444332 4999999999999655444
Q ss_pred CCCccchHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEE---EeccccchhhhhhhHhhcccccCC
Q 020067 90 CLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLV---LRGIFLLRKKEIDWFYEGGAAAIY 166 (331)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li---~~~~~~~~~~~~~~~~~~~~~~~~ 166 (331)
....|+..++++.+..++.....++++++|||+||.+|+.+|+.+|+.|+++| +++++................
T Consensus 105 ~~~~y~~~~~v~~i~~~~~~~~~~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~--- 181 (326)
T KOG1454|consen 105 RGPLYTLRELVELIRRFVKEVFVEPVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRRLLD--- 181 (326)
T ss_pred CCCceehhHHHHHHHHHHHhhcCcceEEEEeCcHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHHhhh---
Confidence 44569999999999999999998999999999999999999999999999999 555544322111000000000
Q ss_pred hhhHHhhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhh-hhcCCccHHHHHHhhhhhhhh
Q 020067 167 PDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEEN-IKRGEDDIFSLAFARIENHYF 245 (331)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 245 (331)
....................+...+.... ...........+. ........ ...+.+....-+
T Consensus 182 --~~~~~~~~~~p~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 244 (326)
T KOG1454|consen 182 --KFLSALELLIPLSLTEPVRLVSEGLLRCL--------------KVVYTDPSRLLEKLLHLLSRPV-KEHFHRDARLSL 244 (326)
T ss_pred --hhccHhhhcCccccccchhheeHhhhcce--------------eeeccccccchhhhhhheeccc-ccchhhhheeeE
Confidence 00000000000000000000000000000 0000000000000 00000000 000000000000
Q ss_pred hccCCCCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHH
Q 020067 246 LNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKN 325 (331)
Q Consensus 246 ~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~ 325 (331)
... ...........+.++.+||+|+++|++|+++|.+.+..+.+.+|++++++++++||.++++. |+++++.|..|+.
T Consensus 245 ~~~-~~~~~~~~~~~~~~i~~~pvlii~G~~D~~~p~~~~~~~~~~~pn~~~~~I~~~gH~~h~e~-Pe~~~~~i~~Fi~ 322 (326)
T KOG1454|consen 245 FLE-LLGFDENLLSLIKKIWKCPVLIIWGDKDQIVPLELAEELKKKLPNAELVEIPGAGHLPHLER-PEEVAALLRSFIA 322 (326)
T ss_pred EEe-ccCccchHHHhhccccCCceEEEEcCcCCccCHHHHHHHHhhCCCceEEEeCCCCcccccCC-HHHHHHHHHHHHH
Confidence 000 00002334446677735999999999999999999999999999999999999999999986 9999999999998
Q ss_pred hhh
Q 020067 326 LIK 328 (331)
Q Consensus 326 ~~~ 328 (331)
+..
T Consensus 323 ~~~ 325 (326)
T KOG1454|consen 323 RLR 325 (326)
T ss_pred Hhc
Confidence 754
No 26
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=100.00 E-value=6.9e-32 Score=215.99 Aligned_cols=279 Identities=19% Similarity=0.288 Sum_probs=165.9
Q ss_pred ceeEeCCCceEEEEeCCCCC-CCcEEEeccCCCC-CCCCCcccccCCC-CcEEEEecCCCCCCCCCCCCCC-ccchHHHH
Q 020067 25 GILKVSDIHTIYWEQSGNPT-GHPVVFLHGGPGG-GTTPSNRRFFDPD-FYRIILFDQRGAGKSTPHACLD-QNTTWDLI 100 (331)
Q Consensus 25 ~~~~~~~g~~l~~~~~g~~~-~~~vl~~HG~~~~-~~~~~~~~~~~~~-g~~vi~~D~~G~G~s~~~~~~~-~~~~~~~~ 100 (331)
.+++.+++ ++.|...+.++ +++|||+||++++ ..++.....++.+ ||+|+++|+||||.|..+.... .+++++++
T Consensus 5 ~~~~~~~~-~~~~~~~~~~~~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~ 83 (288)
T TIGR01250 5 GIITVDGG-YHLFTKTGGEGEKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFV 83 (288)
T ss_pred ceecCCCC-eEEEEeccCCCCCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHH
Confidence 35556555 77887776433 6789999997554 3445555555454 9999999999999998654222 37899999
Q ss_pred HHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcc
Q 020067 101 DDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPEN 180 (331)
Q Consensus 101 ~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (331)
+++.++++.++.++++++||||||.+++.+|..+|++++++|++++............ .....+...
T Consensus 84 ~~~~~~~~~~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~-------------~~~~~~~~~ 150 (288)
T TIGR01250 84 DELEEVREKLGLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDSAPEYVKELN-------------RLRKELPPE 150 (288)
T ss_pred HHHHHHHHHcCCCcEEEEEeehHHHHHHHHHHhCccccceeeEecccccchHHHHHHH-------------HHHhhcChh
Confidence 9999999999999999999999999999999999999999999987553321111000 000000000
Q ss_pred hhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhh-hhhhhccCCCCCcchhhh
Q 020067 181 ERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIE-NHYFLNKGFFPSDSFLLD 259 (331)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 259 (331)
....+ ............. .......+...... .....+..............+.... ...+...... ...+...
T Consensus 151 ~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 225 (288)
T TIGR01250 151 VRAAI-KRCEASGDYDNPE-YQEAVEVFYHHLLC--RTRKWPEALKHLKSGMNTNVYNIMQGPNEFTITGNL-KDWDITD 225 (288)
T ss_pred HHHHH-HHHHhccCcchHH-HHHHHHHHHHHhhc--ccccchHHHHHHhhccCHHHHhcccCCccccccccc-cccCHHH
Confidence 00000 0000000000000 00000000000000 0000000000000000000000000 0000000001 1234556
Q ss_pred hccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHH
Q 020067 260 NIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKN 325 (331)
Q Consensus 260 ~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~ 325 (331)
.+.++ ++|+++++|++|.+ +++..+.+.+.++++++++++++||+++.++ |+++.+.|.+|++
T Consensus 226 ~l~~i-~~P~lii~G~~D~~-~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~-p~~~~~~i~~fl~ 288 (288)
T TIGR01250 226 KLSEI-KVPTLLTVGEFDTM-TPEAAREMQELIAGSRLVVFPDGSHMTMIED-PEVYFKLLSDFIR 288 (288)
T ss_pred Hhhcc-CCCEEEEecCCCcc-CHHHHHHHHHhccCCeEEEeCCCCCCcccCC-HHHHHHHHHHHhC
Confidence 77889 59999999999985 5678888999899999999999999999997 9999999999984
No 27
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=100.00 E-value=9.7e-32 Score=220.63 Aligned_cols=283 Identities=16% Similarity=0.157 Sum_probs=164.5
Q ss_pred CCceEEEEeCCCC---CCCcEEEeccCCCCCC-------------CCCcc----cccCCCCcEEEEecCCCC-CCCCCCC
Q 020067 31 DIHTIYWEQSGNP---TGHPVVFLHGGPGGGT-------------TPSNR----RFFDPDFYRIILFDQRGA-GKSTPHA 89 (331)
Q Consensus 31 ~g~~l~~~~~g~~---~~~~vl~~HG~~~~~~-------------~~~~~----~~~~~~g~~vi~~D~~G~-G~s~~~~ 89 (331)
+|.+++|...|.+ ++|+|||+||++++.. ||... ..++.++|+||++|++|+ |.|..+.
T Consensus 31 ~~~~~~y~~~G~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~ 110 (379)
T PRK00175 31 PPVELAYETYGTLNADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPS 110 (379)
T ss_pred CCceEEEEeccccCCCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCC
Confidence 3457899999853 2689999999887754 23333 245578999999999983 5443221
Q ss_pred ------------CCCccchHHHHHHHHHHHHHhCCCc-EEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhh
Q 020067 90 ------------CLDQNTTWDLIDDIEKLRQHLEIPE-WQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDW 156 (331)
Q Consensus 90 ------------~~~~~~~~~~~~~~~~~~~~~~~~~-v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~ 156 (331)
....++++++++++..++++++.++ ++++||||||.+++.+|.++|++|+++|++++..........
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 190 (379)
T PRK00175 111 SINPDTGKPYGSDFPVITIRDWVRAQARLLDALGITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSARLSAQNIA 190 (379)
T ss_pred CCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCcccCHHHHH
Confidence 0125789999999999999999999 589999999999999999999999999999986643221000
Q ss_pred HhhcccccCC-hhhHHh--hhc-cCCcc-h--------------hhhhHHhhccccCCCch---HHHHHHHHHhhhHHHh
Q 020067 157 FYEGGAAAIY-PDAWES--FRD-LIPEN-E--------------RSCFVDAYSKRLNSDDK---ETQYAAARAWTKWEMM 214 (331)
Q Consensus 157 ~~~~~~~~~~-~~~~~~--~~~-~~~~~-~--------------~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 214 (331)
+......... ...|.. +.. ..... . ...+...+......... .........+....
T Consensus 191 ~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~-- 268 (379)
T PRK00175 191 FNEVARQAILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPFGFDVEFQVESYLRYQ-- 268 (379)
T ss_pred HHHHHHHHHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccccCCCccchHHHHHHHH--
Confidence 0000000000 000000 000 00000 0 00000000000000000 00000000000000
Q ss_pred hhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCC-CcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCC
Q 020067 215 TAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFP-SDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWP 293 (331)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~ 293 (331)
............+......+. ...... ...++.+.+.+| ++|+|+|+|++|.++|++.++.+.+.++
T Consensus 269 ------~~~~~~~~d~~~~~~~~~~~~-----~~d~~~~~~~d~~~~l~~I-~~PtLvI~G~~D~~~p~~~~~~la~~i~ 336 (379)
T PRK00175 269 ------GDKFVERFDANSYLYLTRALD-----YFDPARGRGGDLAAALARI-KARFLVVSFTSDWLFPPARSREIVDALL 336 (379)
T ss_pred ------HHHHhhccCchHHHHHHHHHH-----hccccCCCCCCHHHHHhcC-CCCEEEEEECCccccCHHHHHHHHHHHH
Confidence 000000001111111000000 000000 013467789999 5999999999999999999999999998
Q ss_pred CC----cEEEec-CCCCCCCcCCchhHHHHHHHHHHHhhh
Q 020067 294 EA----DFKVVA-DAGHSANEPGIAAELVATNEKLKNLIK 328 (331)
Q Consensus 294 ~~----~~~~~~-~~gH~~~~~~~~~~~~~~i~~fl~~~~ 328 (331)
++ ++++++ ++||+++.++ |+++++.|.+||+++.
T Consensus 337 ~a~~~~~l~~i~~~~GH~~~le~-p~~~~~~L~~FL~~~~ 375 (379)
T PRK00175 337 AAGADVSYAEIDSPYGHDAFLLD-DPRYGRLVRAFLERAA 375 (379)
T ss_pred hcCCCeEEEEeCCCCCchhHhcC-HHHHHHHHHHHHHhhh
Confidence 87 777775 9999999997 9999999999998864
No 28
>PHA02857 monoglyceride lipase; Provisional
Probab=100.00 E-value=8.4e-32 Score=213.51 Aligned_cols=258 Identities=13% Similarity=0.066 Sum_probs=158.3
Q ss_pred eeEeCCCceEEEEeCCCC--CCCcEEEeccCCCCCC-CCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHH
Q 020067 26 ILKVSDIHTIYWEQSGNP--TGHPVVFLHGGPGGGT-TPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDD 102 (331)
Q Consensus 26 ~~~~~~g~~l~~~~~g~~--~~~~vl~~HG~~~~~~-~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~ 102 (331)
++...||.+++|..+-+. ..+.|+++||++++.. |...+..+.+.||+|+++|+||||.|+... ....++.++++|
T Consensus 4 ~~~~~~g~~l~~~~~~~~~~~~~~v~llHG~~~~~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~-~~~~~~~~~~~d 82 (276)
T PHA02857 4 CMFNLDNDYIYCKYWKPITYPKALVFISHGAGEHSGRYEELAENISSLGILVFSHDHIGHGRSNGEK-MMIDDFGVYVRD 82 (276)
T ss_pred eeecCCCCEEEEEeccCCCCCCEEEEEeCCCccccchHHHHHHHHHhCCCEEEEccCCCCCCCCCcc-CCcCCHHHHHHH
Confidence 455668889999776542 2345666799766544 455666676789999999999999997543 122455666777
Q ss_pred HHHHHHHh----CCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhh-hcc-
Q 020067 103 IEKLRQHL----EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESF-RDL- 176 (331)
Q Consensus 103 ~~~~~~~~----~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~- 176 (331)
+.+.++.+ ..++++++||||||.+++.+|.++|++++++|+++|....... . ........ ...
T Consensus 83 ~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~~-~----------~~~~~~~~~~~~~ 151 (276)
T PHA02857 83 VVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAEAV-P----------RLNLLAAKLMGIF 151 (276)
T ss_pred HHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccccccccc-c----------HHHHHHHHHHHHh
Confidence 77766554 3468999999999999999999999999999999985431100 0 00000000 000
Q ss_pred CCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcch
Q 020067 177 IPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSF 256 (331)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (331)
.+.. ....+........... .. .... ++..........+....... ..+
T Consensus 152 ~~~~----~~~~~~~~~~~~~~~~----~~-----~~~~-----~~~~~~~~~~~~~~~~~~~~-------------~~~ 200 (276)
T PHA02857 152 YPNK----IVGKLCPESVSRDMDE----VY-----KYQY-----DPLVNHEKIKAGFASQVLKA-------------TNK 200 (276)
T ss_pred CCCC----ccCCCCHhhccCCHHH----HH-----HHhc-----CCCccCCCccHHHHHHHHHH-------------HHH
Confidence 0000 0000000000000000 00 0000 00000000000000000000 123
Q ss_pred hhhhccccccccEEEEecCCCCccCCcchHHHHHhC-CCCcEEEecCCCCCCCcCCc--hhHHHHHHHHHHHhh
Q 020067 257 LLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAW-PEADFKVVADAGHSANEPGI--AAELVATNEKLKNLI 327 (331)
Q Consensus 257 ~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~--~~~~~~~i~~fl~~~ 327 (331)
..+.+.++ ++|+|+|+|++|.++|++.++++.+.+ +++++++++++||.++.|.. .+++.+.+.+||+..
T Consensus 201 ~~~~l~~i-~~Pvliv~G~~D~i~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 201 VRKIIPKI-KTPILILQGTNNEISDVSGAYYFMQHANCNREIKIYEGAKHHLHKETDEVKKSVMKEIETWIFNR 273 (276)
T ss_pred HHHhcccC-CCCEEEEecCCCCcCChHHHHHHHHHccCCceEEEeCCCcccccCCchhHHHHHHHHHHHHHHHh
Confidence 34567888 599999999999999999999999887 57899999999999998753 678999999999864
No 29
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=100.00 E-value=9.5e-32 Score=219.32 Aligned_cols=280 Identities=18% Similarity=0.230 Sum_probs=163.8
Q ss_pred CCceEEEEeCCC---CCCCcEEEeccCCCCC--C---------CCCcc----cccCCCCcEEEEecCCC--CCCCCCCC-
Q 020067 31 DIHTIYWEQSGN---PTGHPVVFLHGGPGGG--T---------TPSNR----RFFDPDFYRIILFDQRG--AGKSTPHA- 89 (331)
Q Consensus 31 ~g~~l~~~~~g~---~~~~~vl~~HG~~~~~--~---------~~~~~----~~~~~~g~~vi~~D~~G--~G~s~~~~- 89 (331)
+|.+++|..+|+ ..+++|||+||++++. . ||... ..+..++|+||++|+|| ||.|....
T Consensus 14 ~~~~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~~ 93 (351)
T TIGR01392 14 SDVRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSSI 93 (351)
T ss_pred CCceEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCCC
Confidence 566999999995 2357899999977654 2 34433 26667899999999999 56654311
Q ss_pred ---C------CCccchHHHHHHHHHHHHHhCCCc-EEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhh
Q 020067 90 ---C------LDQNTTWDLIDDIEKLRQHLEIPE-WQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYE 159 (331)
Q Consensus 90 ---~------~~~~~~~~~~~~~~~~~~~~~~~~-v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~ 159 (331)
. ...++++++++++..+++.++.++ ++++||||||.+++.+|.++|++++++|++++..........+..
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 173 (351)
T TIGR01392 94 NPGGRPYGSDFPLITIRDDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSARHSAWCIAFNE 173 (351)
T ss_pred CCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCcCCHHHHHHHH
Confidence 0 124789999999999999999999 999999999999999999999999999999987643221100000
Q ss_pred cccccCC-hhhHHh--hhcc-CCcchh--------------hhhHHhhccccCCC-chH---HHHHHHHHhhhHHHhhhc
Q 020067 160 GGAAAIY-PDAWES--FRDL-IPENER--------------SCFVDAYSKRLNSD-DKE---TQYAAARAWTKWEMMTAH 217 (331)
Q Consensus 160 ~~~~~~~-~~~~~~--~~~~-~~~~~~--------------~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~ 217 (331)
.....+. ...+.. +... .+.... ..+...+....... .+. ........+..+.
T Consensus 174 ~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 248 (351)
T TIGR01392 174 VQRQAILADPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAPQSGESPASGFDTRFQVESYLRYQ----- 248 (351)
T ss_pred HHHHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCcccccccccccCccchHHHHHHHH-----
Confidence 0000000 000000 0000 000000 00000000000000 000 0000000000000
Q ss_pred CCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCCCCcE
Q 020067 218 LLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADF 297 (331)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~ 297 (331)
............+......+ ..........+..+.+.+| ++|+|+|+|++|.++|++.++.+.+.+|++++
T Consensus 249 ---~~~~~~~~d~~~~~~~~~~l-----~~~d~~~~~~~~~~~l~~I-~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~~~~ 319 (351)
T TIGR01392 249 ---GDKFVDRFDANSYLYLTRAL-----DTHDLGRGRGSLTEALSRI-KAPFLVVSITSDWLFPPAESRELAKALPAAGL 319 (351)
T ss_pred ---HHHHHhhcCcchHHHHHHHH-----HhcCCcCCCCCHHHHHhhC-CCCEEEEEeCCccccCHHHHHHHHHHHhhcCC
Confidence 00000000000110000000 0000000013456789999 59999999999999999999999999998876
Q ss_pred E-----EecCCCCCCCcCCchhHHHHHHHHHHH
Q 020067 298 K-----VVADAGHSANEPGIAAELVATNEKLKN 325 (331)
Q Consensus 298 ~-----~~~~~gH~~~~~~~~~~~~~~i~~fl~ 325 (331)
+ +++++||.++.++ |+++.+.|.+||+
T Consensus 320 ~v~~~~i~~~~GH~~~le~-p~~~~~~l~~FL~ 351 (351)
T TIGR01392 320 RVTYVEIESPYGHDAFLVE-TDQVEELIRGFLR 351 (351)
T ss_pred ceEEEEeCCCCCcchhhcC-HHHHHHHHHHHhC
Confidence 6 5678999999997 9999999999984
No 30
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.98 E-value=2.2e-31 Score=207.24 Aligned_cols=238 Identities=17% Similarity=0.173 Sum_probs=143.7
Q ss_pred CCcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCcEEEEEeChhH
Q 020067 45 GHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGS 124 (331)
Q Consensus 45 ~~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg 124 (331)
+|+|||+||++++...|......+ ++|+|+++|+||||.|..+. ..+++++++|+.++++.++.++++++||||||
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~~l-~~~~vi~~D~~G~G~S~~~~---~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg 77 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGEAL-PDYPRLYIDLPGHGGSAAIS---VDGFADVSRLLSQTLQSYNILPYWLVGYSLGG 77 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHHHc-CCCCEEEecCCCCCCCCCcc---ccCHHHHHHHHHHHHHHcCCCCeEEEEECHHH
Confidence 578999999877655444333344 47999999999999998654 34889999999999999999999999999999
Q ss_pred HHHHHHHHhCCCc-eeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhccccCCCchHHHHH
Q 020067 125 TLALAYSLAHPDK-VTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYA 203 (331)
Q Consensus 125 ~~a~~~a~~~p~~-v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (331)
.+++.+|.++|+. +++++++++.............. .....|.... .......+...
T Consensus 78 ~va~~~a~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~----~~~~~~~~~~---~~~~~~~~~~~--------------- 135 (242)
T PRK11126 78 RIAMYYACQGLAGGLCGLIVEGGNPGLQNAEERQARW----QNDRQWAQRF---RQEPLEQVLAD--------------- 135 (242)
T ss_pred HHHHHHHHhCCcccccEEEEeCCCCCCCCHHHHHHHH----hhhHHHHHHh---ccCcHHHHHHH---------------
Confidence 9999999999664 99999988654221110000000 0000111000 00000000000
Q ss_pred HHHHhhhHHHhhhcCCCC-h-hhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCCCccC
Q 020067 204 AARAWTKWEMMTAHLLPN-E-ENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCP 281 (331)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~ 281 (331)
|....... ..... . ......... ...... ..+....... ..+..+.+.++ ++|+++|+|++|..+.
T Consensus 136 ----~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~~-~~~~~~~l~~i-~~P~lii~G~~D~~~~ 203 (242)
T PRK11126 136 ----WYQQPVFA-SLNAEQRQQLVAKRSNN-NGAAVA----AMLEATSLAK-QPDLRPALQAL-TFPFYYLCGERDSKFQ 203 (242)
T ss_pred ----HHhcchhh-ccCccHHHHHHHhcccC-CHHHHH----HHHHhcCccc-CCcHHHHhhcc-CCCeEEEEeCCcchHH
Confidence 00000000 00000 0 000000000 000000 0000000111 23455678899 5999999999998652
Q ss_pred CcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhh
Q 020067 282 MMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNLI 327 (331)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 327 (331)
.+.+. .++++++++++||+++.+. |+++++.|.+|++.+
T Consensus 204 -----~~~~~-~~~~~~~i~~~gH~~~~e~-p~~~~~~i~~fl~~~ 242 (242)
T PRK11126 204 -----ALAQQ-LALPLHVIPNAGHNAHREN-PAAFAASLAQILRLI 242 (242)
T ss_pred -----HHHHH-hcCeEEEeCCCCCchhhhC-hHHHHHHHHHHHhhC
Confidence 23333 3899999999999999997 999999999999763
No 31
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.97 E-value=2.3e-31 Score=207.84 Aligned_cols=239 Identities=21% Similarity=0.218 Sum_probs=145.5
Q ss_pred CcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCcEEEEEeChhHH
Q 020067 46 HPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGST 125 (331)
Q Consensus 46 ~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~ 125 (331)
|+|||+||++++...|......+.++|+|+++|+||+|.|.... .++++++++++.+.+ .++++++||||||.
T Consensus 5 ~~iv~~HG~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~---~~~~~~~~~~~~~~~----~~~~~lvG~S~Gg~ 77 (245)
T TIGR01738 5 VHLVLIHGWGMNAEVFRCLDEELSAHFTLHLVDLPGHGRSRGFG---PLSLADAAEAIAAQA----PDPAIWLGWSLGGL 77 (245)
T ss_pred ceEEEEcCCCCchhhHHHHHHhhccCeEEEEecCCcCccCCCCC---CcCHHHHHHHHHHhC----CCCeEEEEEcHHHH
Confidence 78999999877766555444444678999999999999987543 467777777776543 26899999999999
Q ss_pred HHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhcc--ccCCCchHHHHH
Q 020067 126 LALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSK--RLNSDDKETQYA 203 (331)
Q Consensus 126 ~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 203 (331)
+++.+|.++|++++++|++++.+.......+. ....+.....+........ ......+.. .+........
T Consensus 78 ~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-- 149 (245)
T TIGR01738 78 VALHIAATHPDRVRALVTVASSPCFSAREDWP-----EGIKPDVLTGFQQQLSDDY-QRTIERFLALQTLGTPTARQD-- 149 (245)
T ss_pred HHHHHHHHCHHhhheeeEecCCcccccCCccc-----ccCCHHHHHHHHHHhhhhH-HHHHHHHHHHHHhcCCccchH--
Confidence 99999999999999999998765321110000 0000000100000000000 000000000 0000000000
Q ss_pred HHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCCCccCCc
Q 020067 204 AARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMM 283 (331)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~ 283 (331)
...+. .......... ...+...+.. .. ..+....+.++ ++|+++++|++|.++|++
T Consensus 150 -~~~~~--~~~~~~~~~~--------~~~~~~~~~~-----------~~-~~~~~~~l~~i-~~Pvlii~g~~D~~~~~~ 205 (245)
T TIGR01738 150 -ARALK--QTLLARPTPN--------VQVLQAGLEI-----------LA-TVDLRQPLQNI-SVPFLRLYGYLDGLVPAK 205 (245)
T ss_pred -HHHHH--HHhhccCCCC--------HHHHHHHHHH-----------hh-cccHHHHHhcC-CCCEEEEeecCCcccCHH
Confidence 00000 0000000000 0000000000 00 22345567889 599999999999999999
Q ss_pred chHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHH
Q 020067 284 SAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLK 324 (331)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl 324 (331)
..+.+.+.+|++++++++++||+++.++ |+++++.|.+|+
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~gH~~~~e~-p~~~~~~i~~fi 245 (245)
T TIGR01738 206 VVPYLDKLAPHSELYIFAKAAHAPFLSH-AEAFCALLVAFK 245 (245)
T ss_pred HHHHHHHhCCCCeEEEeCCCCCCccccC-HHHHHHHHHhhC
Confidence 9999999999999999999999999997 999999999985
No 32
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.97 E-value=2.2e-30 Score=214.37 Aligned_cols=258 Identities=19% Similarity=0.148 Sum_probs=162.2
Q ss_pred eeEeCCCceEEEEeCCCCCCCcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHH
Q 020067 26 ILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEK 105 (331)
Q Consensus 26 ~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~ 105 (331)
.+... +.+++|...|++++++|||+||++++...|......+..+|+|+++|+||||.|.... ...+++++++++..
T Consensus 113 ~~~~~-~~~i~~~~~g~~~~~~vl~~HG~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~--~~~~~~~~~~~~~~ 189 (371)
T PRK14875 113 KARIG-GRTVRYLRLGEGDGTPVVLIHGFGGDLNNWLFNHAALAAGRPVIALDLPGHGASSKAV--GAGSLDELAAAVLA 189 (371)
T ss_pred cceEc-CcEEEEecccCCCCCeEEEECCCCCccchHHHHHHHHhcCCEEEEEcCCCCCCCCCCC--CCCCHHHHHHHHHH
Confidence 34444 4488999888767899999999877655544333344567999999999999996544 35689999999999
Q ss_pred HHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhh
Q 020067 106 LRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCF 185 (331)
Q Consensus 106 ~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (331)
+++.++.++++++|||+||.+++.+|..+|+++.++|++++.......... .+..+............
T Consensus 190 ~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~ 257 (371)
T PRK14875 190 FLDALGIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPEINGD------------YIDGFVAAESRRELKPV 257 (371)
T ss_pred HHHhcCCccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCcccchh------------HHHHhhcccchhHHHHH
Confidence 999999999999999999999999999999999999999876432211000 00000000000000011
Q ss_pred HHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccc
Q 020067 186 VDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIR 265 (331)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 265 (331)
+..... ............... . .........+.......+.. .....+....+.++
T Consensus 258 ~~~~~~----~~~~~~~~~~~~~~~------~----------~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~i- 313 (371)
T PRK14875 258 LELLFA----DPALVTRQMVEDLLK------Y----------KRLDGVDDALRALADALFAG---GRQRVDLRDRLASL- 313 (371)
T ss_pred HHHHhc----ChhhCCHHHHHHHHH------H----------hccccHHHHHHHHHHHhccC---cccchhHHHHHhcC-
Confidence 111000 000000000000000 0 00000001111111111000 00123455577888
Q ss_pred cccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHh
Q 020067 266 HINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNL 326 (331)
Q Consensus 266 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 326 (331)
++|+|+++|++|.++|++.++.+ .++.++.+++++||+++.++ |+++.+.|.+|+++
T Consensus 314 ~~Pvlii~g~~D~~vp~~~~~~l---~~~~~~~~~~~~gH~~~~e~-p~~~~~~i~~fl~~ 370 (371)
T PRK14875 314 AIPVLVIWGEQDRIIPAAHAQGL---PDGVAVHVLPGAGHMPQMEA-AADVNRLLAEFLGK 370 (371)
T ss_pred CCCEEEEEECCCCccCHHHHhhc---cCCCeEEEeCCCCCChhhhC-HHHHHHHHHHHhcc
Confidence 59999999999999997665433 35689999999999999997 99999999999964
No 33
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.97 E-value=2.9e-30 Score=202.53 Aligned_cols=264 Identities=14% Similarity=0.096 Sum_probs=157.4
Q ss_pred CCCceEEEEeCCCCCCCcEEEeccCCCCCC-CCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHH
Q 020067 30 SDIHTIYWEQSGNPTGHPVVFLHGGPGGGT-TPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQ 108 (331)
Q Consensus 30 ~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~-~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~ 108 (331)
.+|.+++|..- ..++|+|||+||++++.. |..+...+.++||+|+++|+||||.|..... ..++++++++++.++++
T Consensus 4 ~~~~~~~~~~~-~~~~p~vvliHG~~~~~~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~-~~~~~~~~~~~l~~~i~ 81 (273)
T PLN02211 4 ENGEEVTDMKP-NRQPPHFVLIHGISGGSWCWYKIRCLMENSGYKVTCIDLKSAGIDQSDAD-SVTTFDEYNKPLIDFLS 81 (273)
T ss_pred ccccccccccc-cCCCCeEEEECCCCCCcCcHHHHHHHHHhCCCEEEEecccCCCCCCCCcc-cCCCHHHHHHHHHHHHH
Confidence 35667888763 236789999999666544 4445555656799999999999998854331 23789999999999999
Q ss_pred HhC-CCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhh-HhhcccccCChhhHHhhhccCCcchhhhhH
Q 020067 109 HLE-IPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDW-FYEGGAAAIYPDAWESFRDLIPENERSCFV 186 (331)
Q Consensus 109 ~~~-~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (331)
.++ .++++|+||||||.++..++..+|++|+++|++++.......... ....+.... .......... .
T Consensus 82 ~l~~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~~~~~~----~- 151 (273)
T PLN02211 82 SLPENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATMLKLGFQTDEDMKDGVPDL-----SEFGDVYELG----F- 151 (273)
T ss_pred hcCCCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccccCCCCCCHHHHHhccccch-----hhhccceeee----e-
Confidence 985 579999999999999999999999999999999875432110000 000000000 0000000000 0
Q ss_pred HhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhcccccc
Q 020067 187 DAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRH 266 (331)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 266 (331)
....................+ +... ...+. ..+.....+... ...+. ..+..+...++.+
T Consensus 152 -~~~~~~~~~~~~~~~~~~~~~-----~~~~--~~~~~------~~~~~~~~~~~~-----~~~~~-~~~~~~~~~~~~~ 211 (273)
T PLN02211 152 -GLGPDQPPTSAIIKKEFRRKI-----LYQM--SPQED------STLAAMLLRPGP-----ILALR-SARFEEETGDIDK 211 (273)
T ss_pred -ccCCCCCCceeeeCHHHHHHH-----HhcC--CCHHH------HHHHHHhcCCcC-----ccccc-cccccccccccCc
Confidence 000000000000000000000 0000 00000 000000000000 00000 1111122334425
Q ss_pred ccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhh
Q 020067 267 INATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNLI 327 (331)
Q Consensus 267 ~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 327 (331)
+|+++|.|++|..+|++.++.+.+.++..+++.++ +||.++.++ |+++++.|.++...+
T Consensus 212 vP~l~I~g~~D~~ip~~~~~~m~~~~~~~~~~~l~-~gH~p~ls~-P~~~~~~i~~~a~~~ 270 (273)
T PLN02211 212 VPRVYIKTLHDHVVKPEQQEAMIKRWPPSQVYELE-SDHSPFFST-PFLLFGLLIKAAASV 270 (273)
T ss_pred cceEEEEeCCCCCCCHHHHHHHHHhCCccEEEEEC-CCCCccccC-HHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999997 899999997 999999999988765
No 34
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.97 E-value=1.6e-30 Score=197.57 Aligned_cols=283 Identities=17% Similarity=0.233 Sum_probs=165.8
Q ss_pred CCCccceeEeCCCceEEEEeCC--CCCCCcEEEeccCCC-CCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCC--cc
Q 020067 20 EPYSTGILKVSDIHTIYWEQSG--NPTGHPVVFLHGGPG-GGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLD--QN 94 (331)
Q Consensus 20 ~~~~~~~~~~~~g~~l~~~~~g--~~~~~~vl~~HG~~~-~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~--~~ 94 (331)
.++...++.+.++..+...... +.+++++|++||++. ...|......+. +.++|+++|++|+|.|+++.-.. ..
T Consensus 63 v~~~~~~v~i~~~~~iw~~~~~~~~~~~~plVliHGyGAg~g~f~~Nf~~La-~~~~vyaiDllG~G~SSRP~F~~d~~~ 141 (365)
T KOG4409|consen 63 VPYSKKYVRIPNGIEIWTITVSNESANKTPLVLIHGYGAGLGLFFRNFDDLA-KIRNVYAIDLLGFGRSSRPKFSIDPTT 141 (365)
T ss_pred CCcceeeeecCCCceeEEEeecccccCCCcEEEEeccchhHHHHHHhhhhhh-hcCceEEecccCCCCCCCCCCCCCccc
Confidence 4455667777766555544333 346789999999554 466666666664 49999999999999999776322 23
Q ss_pred chHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhh-hhHhhcccccCChhhHHhh
Q 020067 95 TTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEI-DWFYEGGAAAIYPDAWESF 173 (331)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 173 (331)
....+++-++++....++++.+|+|||+||+++..+|.+||++|+.|||++|........ .... ...+..|...
T Consensus 142 ~e~~fvesiE~WR~~~~L~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~~~-----~~~~~~w~~~ 216 (365)
T KOG4409|consen 142 AEKEFVESIEQWRKKMGLEKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEPEF-----TKPPPEWYKA 216 (365)
T ss_pred chHHHHHHHHHHHHHcCCcceeEeeccchHHHHHHHHHhChHhhceEEEecccccccCCCcchhh-----cCCChHHHhh
Confidence 345789999999999999999999999999999999999999999999999987765331 0000 0011111110
Q ss_pred h----ccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcC-----CccH-HHHHHhhhhhh
Q 020067 174 R----DLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRG-----EDDI-FSLAFARIENH 243 (331)
Q Consensus 174 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~-~~~~~~~~~~~ 243 (331)
. ....+....+.+..+...+... .....+... .. ...++.+..+ .... -...+. +
T Consensus 217 ~~~~~~~~nPl~~LR~~Gp~Gp~Lv~~------~~~d~~~k~---~~--~~~ed~l~~YiY~~n~~~psgE~~fk----~ 281 (365)
T KOG4409|consen 217 LFLVATNFNPLALLRLMGPLGPKLVSR------LRPDRFRKF---PS--LIEEDFLHEYIYHCNAQNPSGETAFK----N 281 (365)
T ss_pred hhhhhhcCCHHHHHHhccccchHHHhh------hhHHHHHhc---cc--cchhHHHHHHHHHhcCCCCcHHHHHH----H
Confidence 0 0000000000000000000000 000000000 00 0000000000 0000 000000 0
Q ss_pred hhhccCCCCCcchhhhhccccc-cccEEEEecCCCCccCCcchHHHHHhC--CCCcEEEecCCCCCCCcCCchhHHHHHH
Q 020067 244 YFLNKGFFPSDSFLLDNIDNIR-HINATIVQGRYDVCCPMMSAWDLHKAW--PEADFKVVADAGHSANEPGIAAELVATN 320 (331)
Q Consensus 244 ~~~~~~~~~~~~~~~~~l~~i~-~~P~l~i~G~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~~i 320 (331)
.+...++. ...+.+.+..++ +||+++|+|++|.+-. ..+.++.+.+ ..++.+++|++||.++.++ |+.+++.+
T Consensus 282 l~~~~g~A--r~Pm~~r~~~l~~~~pv~fiyG~~dWmD~-~~g~~~~~~~~~~~~~~~~v~~aGHhvylDn-p~~Fn~~v 357 (365)
T KOG4409|consen 282 LFEPGGWA--RRPMIQRLRELKKDVPVTFIYGDRDWMDK-NAGLEVTKSLMKEYVEIIIVPGAGHHVYLDN-PEFFNQIV 357 (365)
T ss_pred HHhccchh--hhhHHHHHHhhccCCCEEEEecCcccccc-hhHHHHHHHhhcccceEEEecCCCceeecCC-HHHHHHHH
Confidence 00011111 223344455552 4999999999998754 4556666643 4589999999999999997 99999999
Q ss_pred HHHHHhh
Q 020067 321 EKLKNLI 327 (331)
Q Consensus 321 ~~fl~~~ 327 (331)
..+++..
T Consensus 358 ~~~~~~~ 364 (365)
T KOG4409|consen 358 LEECDKV 364 (365)
T ss_pred HHHHhcc
Confidence 9999864
No 35
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.97 E-value=6.1e-31 Score=203.12 Aligned_cols=224 Identities=23% Similarity=0.301 Sum_probs=149.0
Q ss_pred EEEeccCCCCCCC-CCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCcEEEEEeChhHHH
Q 020067 48 VVFLHGGPGGGTT-PSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTL 126 (331)
Q Consensus 48 vl~~HG~~~~~~~-~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~ 126 (331)
|||+||++++... ..++..+ ++||+|+++|+||+|.|........++++++++|+.++++.++.++++++|||+||.+
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l-~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~~ 79 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEAL-ARGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALGIKKVILVGHSMGGMI 79 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHH-HTTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTTTSSEEEEEETHHHHH
T ss_pred eEEECCCCCCHHHHHHHHHHH-hCCCEEEEEecCCccccccccccCCcchhhhhhhhhhccccccccccccccccccccc
Confidence 7999997776544 4455555 6899999999999999997664346889999999999999999999999999999999
Q ss_pred HHHHHHhCCCceeeEEEeccccchhhhh--hhHhhcccccCChhhHHhhhccCCcchhhhhH-HhhccccCCCchHHHHH
Q 020067 127 ALAYSLAHPDKVTGLVLRGIFLLRKKEI--DWFYEGGAAAIYPDAWESFRDLIPENERSCFV-DAYSKRLNSDDKETQYA 203 (331)
Q Consensus 127 a~~~a~~~p~~v~~li~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 203 (331)
++.++.++|++|+++|+++++....... ... +..+.......... ...+. ..+.........
T Consensus 80 a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----- 144 (228)
T PF12697_consen 80 ALRLAARYPDRVKGLVLLSPPPPLPDSPSRSFG---------PSFIRRLLAWRSRS-LRRLASRFFYRWFDGDEP----- 144 (228)
T ss_dssp HHHHHHHSGGGEEEEEEESESSSHHHHHCHHHH---------HHHHHHHHHHHHHH-HHHHHHHHHHHHHTHHHH-----
T ss_pred ccccccccccccccceeeccccccccccccccc---------chhhhhhhhccccc-cccccccccccccccccc-----
Confidence 9999999999999999999987543211 000 00000000000000 00000 000000000000
Q ss_pred HHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCCCccCCc
Q 020067 204 AARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMM 283 (331)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~ 283 (331)
...... ....+...+... ....+....+.++ ++|+++++|++|.+++.+
T Consensus 145 ------------------~~~~~~-~~~~~~~~~~~~-----------~~~~~~~~~~~~~-~~pvl~i~g~~D~~~~~~ 193 (228)
T PF12697_consen 145 ------------------EDLIRS-SRRALAEYLRSN-----------LWQADLSEALPRI-KVPVLVIHGEDDPIVPPE 193 (228)
T ss_dssp ------------------HHHHHH-HHHHHHHHHHHH-----------HHHHHHHHHHHGS-SSEEEEEEETTSSSSHHH
T ss_pred ------------------cccccc-cccccccccccc-----------ccccccccccccc-CCCeEEeecCCCCCCCHH
Confidence 000000 000000000000 0033455678888 599999999999999999
Q ss_pred chHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHH
Q 020067 284 SAWDLHKAWPEADFKVVADAGHSANEPGIAAELVAT 319 (331)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~ 319 (331)
..+.+.+.++++++++++++||+++.++ |++++++
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~gH~~~~~~-p~~~~~a 228 (228)
T PF12697_consen 194 SAEELADKLPNAELVVIPGAGHFLFLEQ-PDEVAEA 228 (228)
T ss_dssp HHHHHHHHSTTEEEEEETTSSSTHHHHS-HHHHHHH
T ss_pred HHHHHHHHCCCCEEEEECCCCCccHHHC-HHHHhcC
Confidence 9999999999999999999999999997 9998764
No 36
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.97 E-value=1.3e-30 Score=204.86 Aligned_cols=276 Identities=16% Similarity=0.127 Sum_probs=177.7
Q ss_pred CCCCccceeEeCCCceEEEEeCCCCCC--CcEEEeccCC-CCCCCCCcccccCCCCcEEEEecCCCCCCCC-CCCCCCcc
Q 020067 19 VEPYSTGILKVSDIHTIYWEQSGNPTG--HPVVFLHGGP-GGGTTPSNRRFFDPDFYRIILFDQRGAGKST-PHACLDQN 94 (331)
Q Consensus 19 ~~~~~~~~~~~~~g~~l~~~~~g~~~~--~~vl~~HG~~-~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~-~~~~~~~~ 94 (331)
....++.++...||..++|..+-.++. .+||++||.. .+..+..++..+...||.|+++|+||||.|. .... ...
T Consensus 6 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~g~Vvl~HG~~Eh~~ry~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg-~~~ 84 (298)
T COG2267 6 PRTRTEGYFTGADGTRLRYRTWAAPEPPKGVVVLVHGLGEHSGRYEELADDLAARGFDVYALDLRGHGRSPRGQRG-HVD 84 (298)
T ss_pred ccccccceeecCCCceEEEEeecCCCCCCcEEEEecCchHHHHHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCcC-Cch
Confidence 344567788888999999998875434 5799999955 4577888899999999999999999999997 3332 345
Q ss_pred chHHHHHHHHHHHHHhC----CCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhh--hhhhHhhcccccCChh
Q 020067 95 TTWDLIDDIEKLRQHLE----IPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKK--EIDWFYEGGAAAIYPD 168 (331)
Q Consensus 95 ~~~~~~~~~~~~~~~~~----~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~--~~~~~~~~~~~~~~~~ 168 (331)
++.++.+|+..+++... ..+++++||||||.+++.++.+++.+++++|+.+|...... ..........
T Consensus 85 ~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~~~~~~~~~~~~~------ 158 (298)
T COG2267 85 SFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGGAILRLILARLAL------ 158 (298)
T ss_pred hHHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCChhHHHHHHHHHhc------
Confidence 68999999999998875 35899999999999999999999999999999999776542 0000000000
Q ss_pred hHHhhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhcc
Q 020067 169 AWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNK 248 (331)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (331)
.....+...+.... . . .+.........+++....+..+.....-.. ...++...
T Consensus 159 ---------------~~~~~~~p~~~~~~-~-~--------~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~-~~~w~~~~ 212 (298)
T COG2267 159 ---------------KLLGRIRPKLPVDS-N-L--------LEGVLTDDLSRDPAEVAAYEADPLIGVGGP-VSRWVDLA 212 (298)
T ss_pred ---------------ccccccccccccCc-c-c--------ccCcCcchhhcCHHHHHHHhcCCccccCCc-cHHHHHHH
Confidence 00000000000000 0 0 000011111122222222222211000000 00000000
Q ss_pred CCCCCcchhhhhccccccccEEEEecCCCCccC-CcchHHHHHhC--CCCcEEEecCCCCCCCcCCch--hHHHHHHHHH
Q 020067 249 GFFPSDSFLLDNIDNIRHINATIVQGRYDVCCP-MMSAWDLHKAW--PEADFKVVADAGHSANEPGIA--AELVATNEKL 323 (331)
Q Consensus 249 ~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~-~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~--~~~~~~i~~f 323 (331)
.... .........++ ++|+|+++|++|.+++ .+...++.+.. +++++++++|+.|.++.|... +++.+.+.+|
T Consensus 213 ~~a~-~~~~~~~~~~~-~~PvLll~g~~D~vv~~~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~ 290 (298)
T COG2267 213 LLAG-RVPALRDAPAI-ALPVLLLQGGDDRVVDNVEGLARFFERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDILAW 290 (298)
T ss_pred HHhh-cccchhccccc-cCCEEEEecCCCccccCcHHHHHHHHhcCCCCceEEecCCcchhhhcCcchHHHHHHHHHHHH
Confidence 0000 11123345567 6999999999999999 67777777665 678999999999999888767 9999999999
Q ss_pred HHhhhc
Q 020067 324 KNLIKN 329 (331)
Q Consensus 324 l~~~~~ 329 (331)
+.+..+
T Consensus 291 l~~~~~ 296 (298)
T COG2267 291 LAEALP 296 (298)
T ss_pred HHhhcc
Confidence 987654
No 37
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.97 E-value=5.7e-29 Score=204.94 Aligned_cols=272 Identities=18% Similarity=0.195 Sum_probs=152.4
Q ss_pred eEEEEeC-CCCCCCcEEEeccCCCCCC-CCCcccccCCCCcEEEEecCCCCCCCCCCCCCCc---cchHHHHHHHHHHHH
Q 020067 34 TIYWEQS-GNPTGHPVVFLHGGPGGGT-TPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQ---NTTWDLIDDIEKLRQ 108 (331)
Q Consensus 34 ~l~~~~~-g~~~~~~vl~~HG~~~~~~-~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~---~~~~~~~~~~~~~~~ 108 (331)
.+++... +++++|+|||+||++++.. |...+..+ .++|+|+++|+||||.|+.+..... ...+.+++++.++++
T Consensus 93 ~~~~~~~~~~~~~p~vvllHG~~~~~~~~~~~~~~L-~~~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~ 171 (402)
T PLN02894 93 FINTVTFDSKEDAPTLVMVHGYGASQGFFFRNFDAL-ASRFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRK 171 (402)
T ss_pred eEEEEEecCCCCCCEEEEECCCCcchhHHHHHHHHH-HhCCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHH
Confidence 4544333 3446789999999876543 44455554 4579999999999999986542101 112246778888888
Q ss_pred HhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHh
Q 020067 109 HLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDA 188 (331)
Q Consensus 109 ~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (331)
.++.++++++||||||.+++.+|.++|++++++|++++.........+... .... ...|.. .....
T Consensus 172 ~l~~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~--~~~~-~~~~~~-----------~~~~~ 237 (402)
T PLN02894 172 AKNLSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAGFSSESDDKSEW--LTKF-RATWKG-----------AVLNH 237 (402)
T ss_pred HcCCCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCccccCCcchhHHH--Hhhc-chhHHH-----------HHHHH
Confidence 899999999999999999999999999999999999986543221110000 0000 000000 00000
Q ss_pred hccccCCCchHHHH--------HHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhh------hh---hhhhhccCCC
Q 020067 189 YSKRLNSDDKETQY--------AAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFAR------IE---NHYFLNKGFF 251 (331)
Q Consensus 189 ~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~---~~~~~~~~~~ 251 (331)
+..... .+.... .....+.. ..+..... ...+.......+...... .. ..+.......
T Consensus 238 ~~~~~~--~p~~~~~~~gp~~~~l~~~~~~-~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (402)
T PLN02894 238 LWESNF--TPQKIIRGLGPWGPNLVRRYTT-ARFGAHST--GDILSEEESKLLTDYVYHTLAAKASGELCLKYIFSFGAF 312 (402)
T ss_pred HhhcCC--CHHHHHHhccchhHHHHHHHHH-HHhhhccc--ccccCcchhhHHHHHHHHhhcCCCchHHHHHHhccCchh
Confidence 000000 000000 00000000 00000000 000000000000000000 00 0000000001
Q ss_pred CCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhC-CCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhhhc
Q 020067 252 PSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAW-PEADFKVVADAGHSANEPGIAAELVATNEKLKNLIKN 329 (331)
Q Consensus 252 ~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~~ 329 (331)
...+....+.++ ++|+++|+|++|.+.+ .....+.+.. +.+++++++++||+++.|+ |+++.+.|.+|++....
T Consensus 313 -~~~~~~~~l~~I-~vP~liI~G~~D~i~~-~~~~~~~~~~~~~~~~~~i~~aGH~~~~E~-P~~f~~~l~~~~~~~~~ 387 (402)
T PLN02894 313 -ARKPLLESASEW-KVPTTFIYGRHDWMNY-EGAVEARKRMKVPCEIIRVPQGGHFVFLDN-PSGFHSAVLYACRKYLS 387 (402)
T ss_pred -hcchHhhhcccC-CCCEEEEEeCCCCCCc-HHHHHHHHHcCCCCcEEEeCCCCCeeeccC-HHHHHHHHHHHHHHhcc
Confidence 134455678889 5999999999998765 5555566555 4689999999999999997 99999999999887643
No 38
>PLN02511 hydrolase
Probab=99.97 E-value=7.5e-30 Score=209.39 Aligned_cols=272 Identities=15% Similarity=0.158 Sum_probs=159.1
Q ss_pred CCCccceeEeCCCceEEEEeC------CCCCCCcEEEeccCCCCCC--C-CCcccccCCCCcEEEEecCCCCCCCCCCCC
Q 020067 20 EPYSTGILKVSDIHTIYWEQS------GNPTGHPVVFLHGGPGGGT--T-PSNRRFFDPDFYRIILFDQRGAGKSTPHAC 90 (331)
Q Consensus 20 ~~~~~~~~~~~~g~~l~~~~~------g~~~~~~vl~~HG~~~~~~--~-~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~ 90 (331)
..+++..+.+.||..+.+... .+.++|+||++||+.++.. | ...+..++++||+|+++|+||||.|....
T Consensus 69 ~~~~re~l~~~DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~- 147 (388)
T PLN02511 69 VRYRRECLRTPDGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTT- 147 (388)
T ss_pred CceeEEEEECCCCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCC-
Confidence 345667889999988875322 2345778999999765533 2 23455566899999999999999997543
Q ss_pred CCccchHHHHHHHHHHHHHhCC----CcEEEEEeChhHHHHHHHHHhCCCc--eeeEEEeccccchhhhhhhHhhccccc
Q 020067 91 LDQNTTWDLIDDIEKLRQHLEI----PEWQVFGGSWGSTLALAYSLAHPDK--VTGLVLRGIFLLRKKEIDWFYEGGAAA 164 (331)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~----~~v~lvG~S~Gg~~a~~~a~~~p~~--v~~li~~~~~~~~~~~~~~~~~~~~~~ 164 (331)
.......+.+|+.++++.++. .+++++||||||.+++.++.++|++ +.++++++++.........+.. +...
T Consensus 148 -~~~~~~~~~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~~~~~~~-~~~~ 225 (388)
T PLN02511 148 -PQFYSASFTGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIADEDFHK-GFNN 225 (388)
T ss_pred -cCEEcCCchHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHHHHHHhc-cHHH
Confidence 122234567777777777654 5899999999999999999999987 8888888765532111100000 0000
Q ss_pred CChhhHHhhhccCCcchhhhhHHh---hccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhc-CCccHHHHHHhhh
Q 020067 165 IYPDAWESFRDLIPENERSCFVDA---YSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKR-GEDDIFSLAFARI 240 (331)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 240 (331)
.+... +...+ ...... ....+.. ..+...... .....+...+...
T Consensus 226 ~y~~~---~~~~l-----~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~fd~~~t~~ 274 (388)
T PLN02511 226 VYDKA---LAKAL-----RKIFAKHALLFEGLGG-----------------------EYNIPLVANAKTVRDFDDGLTRV 274 (388)
T ss_pred HHHHH---HHHHH-----HHHHHHHHHHHhhCCC-----------------------ccCHHHHHhCCCHHHHHHhhhhh
Confidence 00000 00000 000000 0000000 000000000 0000000000000
Q ss_pred hhhhhhccCCCCCcchhhhhccccccccEEEEecCCCCccCCcch-HHHHHhCCCCcEEEecCCCCCCCcCCchhH----
Q 020067 241 ENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSA-WDLHKAWPEADFKVVADAGHSANEPGIAAE---- 315 (331)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~-~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~---- 315 (331)
...+.....++. ..+....+.+| ++|+|+|+|++|+++|++.. ....+.+|++++++++++||+.+.|. ++.
T Consensus 275 ~~gf~~~~~yy~-~~s~~~~L~~I-~vPtLiI~g~dDpi~p~~~~~~~~~~~~p~~~l~~~~~gGH~~~~E~-p~~~~~~ 351 (388)
T PLN02511 275 SFGFKSVDAYYS-NSSSSDSIKHV-RVPLLCIQAANDPIAPARGIPREDIKANPNCLLIVTPSGGHLGWVAG-PEAPFGA 351 (388)
T ss_pred cCCCCCHHHHHH-HcCchhhhccC-CCCeEEEEcCCCCcCCcccCcHhHHhcCCCEEEEECCCcceeccccC-CCCCCCC
Confidence 000000000000 12234578889 59999999999999998765 45667789999999999999999886 654
Q ss_pred --HHHHHHHHHHhhh
Q 020067 316 --LVATNEKLKNLIK 328 (331)
Q Consensus 316 --~~~~i~~fl~~~~ 328 (331)
+.+.+.+|++.+.
T Consensus 352 ~w~~~~i~~Fl~~~~ 366 (388)
T PLN02511 352 PWTDPVVMEFLEALE 366 (388)
T ss_pred ccHHHHHHHHHHHHH
Confidence 5889999998764
No 39
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.97 E-value=1.8e-29 Score=197.81 Aligned_cols=244 Identities=20% Similarity=0.256 Sum_probs=152.0
Q ss_pred CCcEEEeccCCCCCCC-CCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHH-HHHHHHHhCCCcEEEEEeCh
Q 020067 45 GHPVVFLHGGPGGGTT-PSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDD-IEKLRQHLEIPEWQVFGGSW 122 (331)
Q Consensus 45 ~~~vl~~HG~~~~~~~-~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~lvG~S~ 122 (331)
+|+||++||++++... ......+ .+||+|+++|+||+|.|..+......++++++++ +..+++.++.++++++|||+
T Consensus 1 ~~~vv~~hG~~~~~~~~~~~~~~L-~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~ 79 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADWQALIELL-GPHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQLGIEPFFLVGYSM 79 (251)
T ss_pred CCEEEEEcCCCCchhhHHHHHHHh-cccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHcCCCeEEEEEecc
Confidence 4789999997766554 4445555 4899999999999999987654456788999999 78888999889999999999
Q ss_pred hHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhccc--cCC---Cc
Q 020067 123 GSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKR--LNS---DD 197 (331)
Q Consensus 123 Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---~~ 197 (331)
||.+++.+|.++|+++++++++++................ ...+... +.......+...+... +.. ..
T Consensus 80 Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~~~~~~~~----~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (251)
T TIGR03695 80 GGRIALYYALQYPERVQGLILESGSPGLATEEERAARRQN----DEQLAQR---FEQEGLEAFLDDWYQQPLFASQKNLP 152 (251)
T ss_pred HHHHHHHHHHhCchheeeeEEecCCCCcCchHhhhhhhhc----chhhhhH---HHhcCccHHHHHHhcCceeeecccCC
Confidence 9999999999999999999999876533211110000000 0000000 0000000111111100 000 00
Q ss_pred hHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCC
Q 020067 198 KETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYD 277 (331)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D 277 (331)
......... ......+ ......+... ... ...+....+.++ ++|+++++|++|
T Consensus 153 ~~~~~~~~~---------~~~~~~~--------~~~~~~~~~~--------~~~-~~~~~~~~~~~~-~~P~l~i~g~~D 205 (251)
T TIGR03695 153 PEQRQALRA---------KRLANNP--------EGLAKMLRAT--------GLG-KQPSLWPKLQAL-TIPVLYLCGEKD 205 (251)
T ss_pred hHHhHHHHH---------hcccccc--------hHHHHHHHHh--------hhh-cccchHHHhhCC-CCceEEEeeCcc
Confidence 000000000 0000000 0000000000 000 022334567788 599999999999
Q ss_pred CccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHH
Q 020067 278 VCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKN 325 (331)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~ 325 (331)
..++ +..+.+.+..+++++++++++||+++.++ ++++.+.|.+|++
T Consensus 206 ~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~e~-~~~~~~~i~~~l~ 251 (251)
T TIGR03695 206 EKFV-QIAKEMQKLLPNLTLVIIANAGHNIHLEN-PEAFAKILLAFLE 251 (251)
T ss_pred hHHH-HHHHHHHhcCCCCcEEEEcCCCCCcCccC-hHHHHHHHHHHhC
Confidence 8774 56777888889999999999999999997 9999999999984
No 40
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.97 E-value=3e-29 Score=187.14 Aligned_cols=269 Identities=12% Similarity=0.042 Sum_probs=175.1
Q ss_pred CCCccceeEeCCCceEEEEeCCCCC--CC--cEEEeccCCCC--CCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCc
Q 020067 20 EPYSTGILKVSDIHTIYWEQSGNPT--GH--PVVFLHGGPGG--GTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQ 93 (331)
Q Consensus 20 ~~~~~~~~~~~~g~~l~~~~~g~~~--~~--~vl~~HG~~~~--~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~ 93 (331)
......+++..+|.++.+..+-+.+ .| .|+++||++.. ..+...+..+...||.|+++|++|||.|++... .-
T Consensus 25 ~~~~~~~~~n~rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~~-yi 103 (313)
T KOG1455|consen 25 VTYSESFFTNPRGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLHA-YV 103 (313)
T ss_pred cceeeeeEEcCCCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCcc-cC
Confidence 3455678888899899988776533 22 58999996654 345667888889999999999999999996654 34
Q ss_pred cchHHHHHHHHHHHHHhC------CCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCCh
Q 020067 94 NTTWDLIDDIEKLRQHLE------IPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYP 167 (331)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~------~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (331)
.+++.+++|+....+... ..+.+++||||||.+++.++.++|+..+|+|+++|.......... +....
T Consensus 104 ~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp------~p~v~ 177 (313)
T KOG1455|consen 104 PSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKP------HPPVI 177 (313)
T ss_pred CcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccCC------CcHHH
Confidence 578889999988887642 237999999999999999999999999999999997764322100 00000
Q ss_pred hhHHhhhccCCcchhhhhHHhhccccCCCchH-HHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhh
Q 020067 168 DAWESFRDLIPENERSCFVDAYSKRLNSDDKE-TQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFL 246 (331)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (331)
.. ...+..+.+.+...... ......+. .........++..............+.
T Consensus 178 ~~-------------l~~l~~liP~wk~vp~~d~~~~~~kd----p~~r~~~~~npl~y~g~pRl~T~~ElL-------- 232 (313)
T KOG1455|consen 178 SI-------------LTLLSKLIPTWKIVPTKDIIDVAFKD----PEKRKILRSDPLCYTGKPRLKTAYELL-------- 232 (313)
T ss_pred HH-------------HHHHHHhCCceeecCCccccccccCC----HHHHHHhhcCCceecCCccHHHHHHHH--------
Confidence 00 01111111111100000 00000000 000000111111111111111111111
Q ss_pred ccCCCCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhC--CCCcEEEecCCCCCCCc---CCchhHHHHHHH
Q 020067 247 NKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAW--PEADFKVVADAGHSANE---PGIAAELVATNE 321 (331)
Q Consensus 247 ~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~---~~~~~~~~~~i~ 321 (331)
+...++.+.+.++ ++|.+|+||++|.++.++.++.+.+.. .+.++.++||.-|.++. ++..+.|...|.
T Consensus 233 -----r~~~~le~~l~~v-tvPflilHG~dD~VTDp~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~ 306 (313)
T KOG1455|consen 233 -----RVTADLEKNLNEV-TVPFLILHGTDDKVTDPKVSKELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDII 306 (313)
T ss_pred -----HHHHHHHHhcccc-cccEEEEecCCCcccCcHHHHHHHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHHHH
Confidence 1144566788899 699999999999999999999999987 47899999999998873 334788999999
Q ss_pred HHHHh
Q 020067 322 KLKNL 326 (331)
Q Consensus 322 ~fl~~ 326 (331)
+||++
T Consensus 307 ~Wl~~ 311 (313)
T KOG1455|consen 307 SWLDE 311 (313)
T ss_pred HHHHh
Confidence 99875
No 41
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.97 E-value=9.4e-29 Score=201.81 Aligned_cols=265 Identities=13% Similarity=0.070 Sum_probs=161.5
Q ss_pred ccceeEeCCCceEEEEeCCCC---CCCcEEEeccCCCCCC-CCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHH
Q 020067 23 STGILKVSDIHTIYWEQSGNP---TGHPVVFLHGGPGGGT-TPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWD 98 (331)
Q Consensus 23 ~~~~~~~~~g~~l~~~~~g~~---~~~~vl~~HG~~~~~~-~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~ 98 (331)
....+...++..++|..+.+. ..++||++||++++.. |..++..+.++||+|+++|+||||.|+.... ...+++.
T Consensus 111 ~~~~~~~~~~~~l~~~~~~p~~~~~~~~Vl~lHG~~~~~~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~-~~~~~~~ 189 (395)
T PLN02652 111 ATSLFYGARRNALFCRSWAPAAGEMRGILIIIHGLNEHSGRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHG-YVPSLDY 189 (395)
T ss_pred EEEEEECCCCCEEEEEEecCCCCCCceEEEEECCchHHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCC-CCcCHHH
Confidence 334555566668887776542 2357999999776544 5566777777899999999999999986542 2357788
Q ss_pred HHHHHHHHHHHhCC----CcEEEEEeChhHHHHHHHHHhCCC---ceeeEEEeccccchhhhhhhHhhcccccCChhhHH
Q 020067 99 LIDDIEKLRQHLEI----PEWQVFGGSWGSTLALAYSLAHPD---KVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWE 171 (331)
Q Consensus 99 ~~~~~~~~~~~~~~----~~v~lvG~S~Gg~~a~~~a~~~p~---~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (331)
+++|+..+++.+.. .+++++||||||.+++.++. +|+ +++++|+.+|............. ......
T Consensus 190 ~~~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~~~~~~~------~~~l~~ 262 (395)
T PLN02652 190 VVEDTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPAHPIVGA------VAPIFS 262 (395)
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccccchHHHHH------HHHHHH
Confidence 89999999888753 37999999999999998764 554 89999999886432111000000 000000
Q ss_pred hhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCC
Q 020067 172 SFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFF 251 (331)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (331)
....... .... ........ ..... .... .. ++..................
T Consensus 263 ~~~p~~~---~~~~-~~~~~~~s-~~~~~---~~~~------~~-----dp~~~~g~i~~~~~~~~~~~----------- 312 (395)
T PLN02652 263 LVAPRFQ---FKGA-NKRGIPVS-RDPAA---LLAK------YS-----DPLVYTGPIRVRTGHEILRI----------- 312 (395)
T ss_pred HhCCCCc---ccCc-ccccCCcC-CCHHH---HHHH------hc-----CCCcccCCchHHHHHHHHHH-----------
Confidence 0000000 0000 00000000 00000 0000 00 00000000000000000000
Q ss_pred CCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCC--CCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhhh
Q 020067 252 PSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWP--EADFKVVADAGHSANEPGIAAELVATNEKLKNLIK 328 (331)
Q Consensus 252 ~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~ 328 (331)
.....+.+.++ ++|+|+++|++|.++|++.++.+++.++ +++++++++++|.++.+..++++.+.|.+|++...
T Consensus 313 --~~~l~~~L~~I-~vPvLIi~G~~D~vvp~~~a~~l~~~~~~~~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~~~ 388 (395)
T PLN02652 313 --SSYLTRNFKSV-TVPFMVLHGTADRVTDPLASQDLYNEAASRHKDIKLYDGFLHDLLFEPEREEVGRDIIDWMEKRL 388 (395)
T ss_pred --HHHHHhhcccC-CCCEEEEEeCCCCCCCHHHHHHHHHhcCCCCceEEEECCCeEEeccCCCHHHHHHHHHHHHHHHh
Confidence 11234567888 6999999999999999999999988864 47899999999999777559999999999998754
No 42
>PRK05855 short chain dehydrogenase; Validated
Probab=99.96 E-value=2.5e-28 Score=214.08 Aligned_cols=286 Identities=14% Similarity=0.094 Sum_probs=159.7
Q ss_pred ceeEeCCCceEEEEeCCCCCCCcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHH
Q 020067 25 GILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIE 104 (331)
Q Consensus 25 ~~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~ 104 (331)
.++...+|.+++|...|++++|+|||+||++++...|......+.++|+|+++|+||||.|........++++++++|+.
T Consensus 5 ~~~~~~~g~~l~~~~~g~~~~~~ivllHG~~~~~~~w~~~~~~L~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~dl~ 84 (582)
T PRK05855 5 RTVVSSDGVRLAVYEWGDPDRPTVVLVHGYPDNHEVWDGVAPLLADRFRVVAYDVRGAGRSSAPKRTAAYTLARLADDFA 84 (582)
T ss_pred EEEEeeCCEEEEEEEcCCCCCCeEEEEcCCCchHHHHHHHHHHhhcceEEEEecCCCCCCCCCCCcccccCHHHHHHHHH
Confidence 33444577799999999777899999999877655444334444789999999999999998655434688999999999
Q ss_pred HHHHHhCCCc-EEEEEeChhHHHHHHHHHhC--CCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcch
Q 020067 105 KLRQHLEIPE-WQVFGGSWGSTLALAYSLAH--PDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENE 181 (331)
Q Consensus 105 ~~~~~~~~~~-v~lvG~S~Gg~~a~~~a~~~--p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (331)
.+++.++..+ ++|+||||||.+++.++... ++++..++.++++..... ..+... ......+..+.........
T Consensus 85 ~~i~~l~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~-- 160 (582)
T PRK05855 85 AVIDAVSPDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSLDHV-GFWLRS-GLRRPTPRRLARALGQLLR-- 160 (582)
T ss_pred HHHHHhCCCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCchHHH-HHHHhh-cccccchhhhhHHHHHHhh--
Confidence 9999998765 99999999999999887762 345555555443321100 000000 0000000000000000000
Q ss_pred hhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhc
Q 020067 182 RSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNI 261 (331)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 261 (331)
........................+..................... ........ .+..... .......+
T Consensus 161 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-----~~~~~~~---~~~~~~~~ 229 (582)
T PRK05855 161 --SWYIYLFHLPVLPELLWRLGLGRAWPRLLRRVEGTPVDPIPTQTTL-SDGAHGVK-----LYRANMI---RSLSRPRE 229 (582)
T ss_pred --hHHHHHHhCCCCcHHHhccchhhHHHHhhhhccCCCcchhhhhhhh-ccccchHH-----HHHhhhh---hhhccCcc
Confidence 0000000000000000000000000000000000000000000000 00000000 0000000 00111224
Q ss_pred cccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhhh
Q 020067 262 DNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNLIK 328 (331)
Q Consensus 262 ~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~ 328 (331)
..+ ++|+|+|+|++|.++|++..+.+.+.+++.++++++ +||+++.+. |+++.+.|.+|+++..
T Consensus 230 ~~~-~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~-~gH~~~~e~-p~~~~~~i~~fl~~~~ 293 (582)
T PRK05855 230 RYT-DVPVQLIVPTGDPYVRPALYDDLSRWVPRLWRREIK-AGHWLPMSH-PQVLAAAVAEFVDAVE 293 (582)
T ss_pred CCc-cCceEEEEeCCCcccCHHHhccccccCCcceEEEcc-CCCcchhhC-hhHHHHHHHHHHHhcc
Confidence 457 599999999999999999888888888888888886 799999997 9999999999998764
No 43
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.96 E-value=3.1e-28 Score=229.28 Aligned_cols=256 Identities=18% Similarity=0.176 Sum_probs=159.1
Q ss_pred EEEEeCCC-CCCCcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCC------CCccchHHHHHHHHHHH
Q 020067 35 IYWEQSGN-PTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHAC------LDQNTTWDLIDDIEKLR 107 (331)
Q Consensus 35 l~~~~~g~-~~~~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~------~~~~~~~~~~~~~~~~~ 107 (331)
++|...|. +++++|||+||++++...|......+.++|+|+++|+||||.|..... ...++++++++++..++
T Consensus 1360 i~~~~~G~~~~~~~vVllHG~~~s~~~w~~~~~~L~~~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll 1439 (1655)
T PLN02980 1360 IKVHEVGQNAEGSVVLFLHGFLGTGEDWIPIMKAISGSARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLI 1439 (1655)
T ss_pred EEEEecCCCCCCCeEEEECCCCCCHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHH
Confidence 45566664 346899999998777554443333445679999999999999975421 13468899999999999
Q ss_pred HHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHH
Q 020067 108 QHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVD 187 (331)
Q Consensus 108 ~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (331)
++++.++++|+||||||.+++.++.++|++|+++|++++.+.......+..... ...... ..+.......+..
T Consensus 1440 ~~l~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~~~~~~~~~~----~~~~~~---~~l~~~g~~~~~~ 1512 (1655)
T PLN02980 1440 EHITPGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKDEVARKIRSA----KDDSRA---RMLIDHGLEIFLE 1512 (1655)
T ss_pred HHhCCCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCchHHHHHHhh----hhhHHH---HHHHhhhHHHHHH
Confidence 999999999999999999999999999999999999986543211100000000 000000 0000000000000
Q ss_pred hhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhh---h----hcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhh
Q 020067 188 AYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEEN---I----KRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDN 260 (331)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (331)
.+.. . .... .....+.. . .......+...+.. .... ...+..+.
T Consensus 1513 ~~~~----~---------------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--------~~~~-~~~dl~~~ 1563 (1655)
T PLN02980 1513 NWYS----G---------------ELWK-SLRNHPHFNKIVASRLLHKDVPSLAKLLSD--------LSIG-RQPSLWED 1563 (1655)
T ss_pred Hhcc----H---------------HHhh-hhccCHHHHHHHHHHHhcCCHHHHHHHHHH--------hhhc-ccchHHHH
Confidence 0000 0 0000 00000000 0 00000000000000 0000 13345567
Q ss_pred ccccccccEEEEecCCCCccCCcchHHHHHhCCC------------CcEEEecCCCCCCCcCCchhHHHHHHHHHHHhhh
Q 020067 261 IDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPE------------ADFKVVADAGHSANEPGIAAELVATNEKLKNLIK 328 (331)
Q Consensus 261 l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~------------~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~ 328 (331)
+.++ ++|+|+|+|++|..++ +.++++.+.+++ +++++++++||.++.|+ |+++++.|.+|+++..
T Consensus 1564 L~~I-~~PtLlI~Ge~D~~~~-~~a~~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~-Pe~f~~~I~~FL~~~~ 1640 (1655)
T PLN02980 1564 LKQC-DTPLLLVVGEKDVKFK-QIAQKMYREIGKSKESGNDKGKEIIEIVEIPNCGHAVHLEN-PLPVIRALRKFLTRLH 1640 (1655)
T ss_pred HhhC-CCCEEEEEECCCCccH-HHHHHHHHHccccccccccccccceEEEEECCCCCchHHHC-HHHHHHHHHHHHHhcc
Confidence 8999 5999999999999875 667778887765 48999999999999997 9999999999999875
Q ss_pred c
Q 020067 329 N 329 (331)
Q Consensus 329 ~ 329 (331)
+
T Consensus 1641 ~ 1641 (1655)
T PLN02980 1641 N 1641 (1655)
T ss_pred c
Confidence 4
No 44
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.95 E-value=1.1e-27 Score=169.86 Aligned_cols=223 Identities=18% Similarity=0.157 Sum_probs=152.8
Q ss_pred CCcEEEeccCCCCCC-CCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHH---hCCCcEEEEEe
Q 020067 45 GHPVVFLHGGPGGGT-TPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQH---LEIPEWQVFGG 120 (331)
Q Consensus 45 ~~~vl~~HG~~~~~~-~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~lvG~ 120 (331)
+..|||+||+.|+.. ...+.+.+.++||.|.+|.+||||...... -..+.++|-+++.+.-+. .+.+.|.++|.
T Consensus 15 ~~AVLllHGFTGt~~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~f--l~t~~~DW~~~v~d~Y~~L~~~gy~eI~v~Gl 92 (243)
T COG1647 15 NRAVLLLHGFTGTPRDVRMLGRYLNENGYTVYAPRYPGHGTLPEDF--LKTTPRDWWEDVEDGYRDLKEAGYDEIAVVGL 92 (243)
T ss_pred CEEEEEEeccCCCcHHHHHHHHHHHHCCceEecCCCCCCCCCHHHH--hcCCHHHHHHHHHHHHHHHHHcCCCeEEEEee
Confidence 378999999888755 577788888899999999999999886433 356778887777665554 46789999999
Q ss_pred ChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhccccCCCchHH
Q 020067 121 SWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKET 200 (331)
Q Consensus 121 S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (331)
||||.+++.+|.++| ++++|.++++....... .....+. ...+.+ ......+...
T Consensus 93 SmGGv~alkla~~~p--~K~iv~m~a~~~~k~~~-------------~iie~~l---------~y~~~~-kk~e~k~~e~ 147 (243)
T COG1647 93 SMGGVFALKLAYHYP--PKKIVPMCAPVNVKSWR-------------IIIEGLL---------EYFRNA-KKYEGKDQEQ 147 (243)
T ss_pred cchhHHHHHHHhhCC--ccceeeecCCcccccch-------------hhhHHHH---------HHHHHh-hhccCCCHHH
Confidence 999999999999998 99999999876532110 0000000 000011 1111111111
Q ss_pred HHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCCCcc
Q 020067 201 QYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCC 280 (331)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~ 280 (331)
.......+.. . .......+..+ ..+....+..| ..|+++++|.+|+++
T Consensus 148 ~~~e~~~~~~---------~---------~~~~~~~~~~~-------------i~~~~~~~~~I-~~pt~vvq~~~D~mv 195 (243)
T COG1647 148 IDKEMKSYKD---------T---------PMTTTAQLKKL-------------IKDARRSLDKI-YSPTLVVQGRQDEMV 195 (243)
T ss_pred HHHHHHHhhc---------c---------hHHHHHHHHHH-------------HHHHHhhhhhc-ccchhheecccCCCC
Confidence 1111111100 0 00000001100 33456678899 599999999999999
Q ss_pred CCcchHHHHHhC--CCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHh
Q 020067 281 PMMSAWDLHKAW--PEADFKVVADAGHSANEPGIAAELVATNEKLKNL 326 (331)
Q Consensus 281 ~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 326 (331)
|.+.+..+.+.. .+.++..++++||.+..+...+.+.+.+..||+.
T Consensus 196 ~~~sA~~Iy~~v~s~~KeL~~~e~SgHVIt~D~Erd~v~e~V~~FL~~ 243 (243)
T COG1647 196 PAESANFIYDHVESDDKELKWLEGSGHVITLDKERDQVEEDVITFLEK 243 (243)
T ss_pred CHHHHHHHHHhccCCcceeEEEccCCceeecchhHHHHHHHHHHHhhC
Confidence 999999999988 3578999999999998877799999999999963
No 45
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.95 E-value=4.4e-27 Score=163.94 Aligned_cols=250 Identities=16% Similarity=0.178 Sum_probs=163.4
Q ss_pred CCccceeEeCCCceEEEEeCCCCCCC-cEEEeccCCCC-CC-CCCcccccCC-CCcEEEEecCCCCCCCCCCCCCCccch
Q 020067 21 PYSTGILKVSDIHTIYWEQSGNPTGH-PVVFLHGGPGG-GT-TPSNRRFFDP-DFYRIILFDQRGAGKSTPHACLDQNTT 96 (331)
Q Consensus 21 ~~~~~~~~~~~g~~l~~~~~g~~~~~-~vl~~HG~~~~-~~-~~~~~~~~~~-~g~~vi~~D~~G~G~s~~~~~~~~~~~ 96 (331)
.+++..+.+++. ++.|..+| .+| .|++++|..++ .. +......+.. ..+.||++|.||+|.|.++.. ....
T Consensus 20 ~~te~kv~vng~-ql~y~~~G--~G~~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~R--kf~~ 94 (277)
T KOG2984|consen 20 DYTESKVHVNGT-QLGYCKYG--HGPNYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPER--KFEV 94 (277)
T ss_pred hhhhheeeecCc-eeeeeecC--CCCceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcc--cchH
Confidence 345566666555 99999999 454 68999995444 32 3333332322 349999999999999987763 3333
Q ss_pred ---HHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhh
Q 020067 97 ---WDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESF 173 (331)
Q Consensus 97 ---~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (331)
..-+++...+++.++.+++.++|+|-||..++..|+++++.|.++|+.++............+ .+
T Consensus 95 ~ff~~Da~~avdLM~aLk~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~ma~k------------gi 162 (277)
T KOG2984|consen 95 QFFMKDAEYAVDLMEALKLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGAMAFK------------GI 162 (277)
T ss_pred HHHHHhHHHHHHHHHHhCCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhHHHHh------------ch
Confidence 344566677889999999999999999999999999999999999999876543221110000 00
Q ss_pred hccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCC
Q 020067 174 RDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPS 253 (331)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (331)
+. ...+..+..+-+... .......+.|..|....... ..+..
T Consensus 163 Rd------v~kWs~r~R~P~e~~--Yg~e~f~~~wa~wvD~v~qf-----------------------------~~~~d- 204 (277)
T KOG2984|consen 163 RD------VNKWSARGRQPYEDH--YGPETFRTQWAAWVDVVDQF-----------------------------HSFCD- 204 (277)
T ss_pred HH------HhhhhhhhcchHHHh--cCHHHHHHHHHHHHHHHHHH-----------------------------hhcCC-
Confidence 00 000000000000000 00001111222221111110 01111
Q ss_pred cchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhh
Q 020067 254 DSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNLI 327 (331)
Q Consensus 254 ~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 327 (331)
..-..-.+.++ +||+||++|++|++++...+-.+..+.+.+++.++|.++|.+++.- ++++.+.+.+|+++.
T Consensus 205 G~fCr~~lp~v-kcPtli~hG~kDp~~~~~hv~fi~~~~~~a~~~~~peGkHn~hLry-a~eFnklv~dFl~~~ 276 (277)
T KOG2984|consen 205 GRFCRLVLPQV-KCPTLIMHGGKDPFCGDPHVCFIPVLKSLAKVEIHPEGKHNFHLRY-AKEFNKLVLDFLKST 276 (277)
T ss_pred CchHhhhcccc-cCCeeEeeCCcCCCCCCCCccchhhhcccceEEEccCCCcceeeec-hHHHHHHHHHHHhcc
Confidence 11133478899 5999999999999999999998999899999999999999999995 999999999999863
No 46
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.95 E-value=6.5e-26 Score=184.38 Aligned_cols=279 Identities=12% Similarity=0.012 Sum_probs=162.0
Q ss_pred ceEEEEeCCCCC---CCcEEEeccCCCCC-------------CCCC-c---ccccCCCCcEEEEecCCCCCCCCCC----
Q 020067 33 HTIYWEQSGNPT---GHPVVFLHGGPGGG-------------TTPS-N---RRFFDPDFYRIILFDQRGAGKSTPH---- 88 (331)
Q Consensus 33 ~~l~~~~~g~~~---~~~vl~~HG~~~~~-------------~~~~-~---~~~~~~~g~~vi~~D~~G~G~s~~~---- 88 (331)
.+|.|.++|..+ .++||++|++.++. .||. + -..+....|.||++|..|-|.|..+
T Consensus 41 ~~~~Y~t~G~ln~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~g~ 120 (389)
T PRK06765 41 VQMGYETYGTLNRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNVIT 120 (389)
T ss_pred ceEEEEeccccCCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCCCC
Confidence 378999999643 47899999976642 2333 2 1224457899999999987653211
Q ss_pred -------C--------CCCccchHHHHHHHHHHHHHhCCCcEE-EEEeChhHHHHHHHHHhCCCceeeEEEeccccchhh
Q 020067 89 -------A--------CLDQNTTWDLIDDIEKLRQHLEIPEWQ-VFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKK 152 (331)
Q Consensus 89 -------~--------~~~~~~~~~~~~~~~~~~~~~~~~~v~-lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~ 152 (331)
+ ....++++++++++..+++++++++++ ++||||||++++.+|.++|++++++|++++......
T Consensus 121 tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~~~~~~ 200 (389)
T PRK06765 121 TGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGNPQNDA 200 (389)
T ss_pred CCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEecCCCCCh
Confidence 1 123479999999999999999999987 999999999999999999999999999987655322
Q ss_pred hh-hhHhhcc-cccCChhhHHhh--hccCCcchhhhhHHhhccccCCCchHHHH-------------------HHHHHhh
Q 020067 153 EI-DWFYEGG-AAAIYPDAWESF--RDLIPENERSCFVDAYSKRLNSDDKETQY-------------------AAARAWT 209 (331)
Q Consensus 153 ~~-~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~ 209 (331)
.. ..+.... ........|..- ....+........................ .....|.
T Consensus 201 ~~~~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~~~~~~~~~~~~~~~e~yl 280 (389)
T PRK06765 201 WTSVNVLQNWAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASIEVDPYEKVSTLTSFEKEI 280 (389)
T ss_pred hHHHHHHHHHHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCccccccccccccchhhHHHHH
Confidence 21 0000000 000000000000 00000000000000000000000000000 0000000
Q ss_pred hHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCCCccCCcchHHHH
Q 020067 210 KWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLH 289 (331)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~ 289 (331)
.... .......+...+......+...- ......++.+.+.++ ++|+|+|+|++|.++|++.++.+.
T Consensus 281 ~~~~--------~~~~~~~Dan~~l~l~~a~~~~d-----~g~~~~dl~~~L~~I-~~PtLvI~G~~D~l~p~~~~~~la 346 (389)
T PRK06765 281 NKAT--------YRRAELVDANHWLYLAKAVQLFD-----AGHGFSSLEEALSNI-EANVLMIPCKQDLLQPPRYNYKMV 346 (389)
T ss_pred HHHH--------HHhhhccChhhHHHHHHHHHhcC-----CccccCCHHHHHhcC-CCCEEEEEeCCCCCCCHHHHHHHH
Confidence 0000 00011111111111111111000 000012567788999 599999999999999999999999
Q ss_pred HhCC----CCcEEEecC-CCCCCCcCCchhHHHHHHHHHHHh
Q 020067 290 KAWP----EADFKVVAD-AGHSANEPGIAAELVATNEKLKNL 326 (331)
Q Consensus 290 ~~~~----~~~~~~~~~-~gH~~~~~~~~~~~~~~i~~fl~~ 326 (331)
+.++ +++++++++ +||..+.++ ++++.+.|.+|+++
T Consensus 347 ~~lp~~~~~a~l~~I~s~~GH~~~le~-p~~~~~~I~~FL~~ 387 (389)
T PRK06765 347 DILQKQGKYAEVYEIESINGHMAGVFD-IHLFEKKIYEFLNR 387 (389)
T ss_pred HHhhhcCCCeEEEEECCCCCcchhhcC-HHHHHHHHHHHHcc
Confidence 9886 689999985 899999997 99999999999975
No 47
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.95 E-value=3.3e-27 Score=190.12 Aligned_cols=264 Identities=14% Similarity=0.075 Sum_probs=153.8
Q ss_pred eEeCCCceEEEEeCCCC-CCCcEEEeccCCCCCCC---------------------------CCcccccCCCCcEEEEec
Q 020067 27 LKVSDIHTIYWEQSGNP-TGHPVVFLHGGPGGGTT---------------------------PSNRRFFDPDFYRIILFD 78 (331)
Q Consensus 27 ~~~~~g~~l~~~~~g~~-~~~~vl~~HG~~~~~~~---------------------------~~~~~~~~~~g~~vi~~D 78 (331)
+...+|.+|++..+.++ .+.+|+++||.+....+ ..++..+.++||+|+++|
T Consensus 2 ~~~~~g~~l~~~~~~~~~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~D 81 (332)
T TIGR01607 2 FRNKDGLLLKTYSWIVKNAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGLD 81 (332)
T ss_pred ccCCCCCeEEEeeeeccCCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEec
Confidence 45568888988877542 23479999996655432 124667778999999999
Q ss_pred CCCCCCCCCCCCC--CccchHHHHHHHHHHHHHhC------------------------CCcEEEEEeChhHHHHHHHHH
Q 020067 79 QRGAGKSTPHACL--DQNTTWDLIDDIEKLRQHLE------------------------IPEWQVFGGSWGSTLALAYSL 132 (331)
Q Consensus 79 ~~G~G~s~~~~~~--~~~~~~~~~~~~~~~~~~~~------------------------~~~v~lvG~S~Gg~~a~~~a~ 132 (331)
+||||.|...... .-.+++++++|+..+++.+. ..+++++||||||.+++.++.
T Consensus 82 ~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~ 161 (332)
T TIGR01607 82 LQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLE 161 (332)
T ss_pred ccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHH
Confidence 9999999854211 12478899999998887642 247999999999999999987
Q ss_pred hCCC--------ceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhccccCCCchHHHHHH
Q 020067 133 AHPD--------KVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAA 204 (331)
Q Consensus 133 ~~p~--------~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (331)
.+++ .++|+|+++|......... ......+...... ...+..+...+......
T Consensus 162 ~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~-----~~~~~~~~~~~~l---------~~~~~~~~p~~~~~~~~----- 222 (332)
T TIGR01607 162 LLGKSNENNDKLNIKGCISLSGMISIKSVGS-----DDSFKFKYFYLPV---------MNFMSRVFPTFRISKKI----- 222 (332)
T ss_pred HhccccccccccccceEEEeccceEEecccC-----CCcchhhhhHHHH---------HHHHHHHCCcccccCcc-----
Confidence 6542 5899998888653210000 0000000000000 00001111111000000
Q ss_pred HHHhhhH-HHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccc-cccEEEEecCCCCccCC
Q 020067 205 ARAWTKW-EMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIR-HINATIVQGRYDVCCPM 282 (331)
Q Consensus 205 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~-~~P~l~i~G~~D~~~~~ 282 (331)
+..+ .........++..........+...+... .......+.+++ ++|+|+++|++|.++++
T Consensus 223 ---~~~~~~~~~~~~~~Dp~~~~~~~s~~~~~~l~~~-------------~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~ 286 (332)
T TIGR01607 223 ---RYEKSPYVNDIIKFDKFRYDGGITFNLASELIKA-------------TDTLDCDIDYIPKDIPILFIHSKGDCVCSY 286 (332)
T ss_pred ---ccccChhhhhHHhcCccccCCcccHHHHHHHHHH-------------HHHHHhhHhhCCCCCCEEEEEeCCCCccCH
Confidence 0000 00000000011000000000000000000 011122333441 48999999999999999
Q ss_pred cchHHHHHhC--CCCcEEEecCCCCCCCcCCchhHHHHHHHHHHH
Q 020067 283 MSAWDLHKAW--PEADFKVVADAGHSANEPGIAAELVATNEKLKN 325 (331)
Q Consensus 283 ~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~ 325 (331)
+.++.+.+.. ++++++++++++|.++.|...+++.+.|.+||+
T Consensus 287 ~~~~~~~~~~~~~~~~l~~~~g~~H~i~~E~~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 287 EGTVSFYNKLSISNKELHTLEDMDHVITIEPGNEEVLKKIIEWIS 331 (332)
T ss_pred HHHHHHHHhccCCCcEEEEECCCCCCCccCCCHHHHHHHHHHHhh
Confidence 9999888765 578999999999999988668999999999985
No 48
>PRK13604 luxD acyl transferase; Provisional
Probab=99.95 E-value=2.3e-26 Score=177.05 Aligned_cols=239 Identities=10% Similarity=0.083 Sum_probs=149.0
Q ss_pred ccceeEeCCCceEEEEeCCCC-----CCCcEEEeccCCCCCC-CCCcccccCCCCcEEEEecCCCC-CCCCCCCCCCccc
Q 020067 23 STGILKVSDIHTIYWEQSGNP-----TGHPVVFLHGGPGGGT-TPSNRRFFDPDFYRIILFDQRGA-GKSTPHACLDQNT 95 (331)
Q Consensus 23 ~~~~~~~~~g~~l~~~~~g~~-----~~~~vl~~HG~~~~~~-~~~~~~~~~~~g~~vi~~D~~G~-G~s~~~~~~~~~~ 95 (331)
..+.+.+.+|.+|+-+...+. ..++||++||+++... +..++..+.++||.|+.+|+||+ |.|++... ..+
T Consensus 10 ~~~~~~~~dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~--~~t 87 (307)
T PRK13604 10 IDHVICLENGQSIRVWETLPKENSPKKNNTILIASGFARRMDHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTID--EFT 87 (307)
T ss_pred hhheEEcCCCCEEEEEEEcCcccCCCCCCEEEEeCCCCCChHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCccc--cCc
Confidence 467889999999987655442 2367999999877643 56677888889999999999987 99975432 233
Q ss_pred hHHHHHHHHHHHHHh---CCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHh
Q 020067 96 TWDLIDDIEKLRQHL---EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWES 172 (331)
Q Consensus 96 ~~~~~~~~~~~~~~~---~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (331)
......|+..+++.+ +.+++.|+||||||.+++..|... .++++|+.+|...............
T Consensus 88 ~s~g~~Dl~aaid~lk~~~~~~I~LiG~SmGgava~~~A~~~--~v~~lI~~sp~~~l~d~l~~~~~~~----------- 154 (307)
T PRK13604 88 MSIGKNSLLTVVDWLNTRGINNLGLIAASLSARIAYEVINEI--DLSFLITAVGVVNLRDTLERALGYD----------- 154 (307)
T ss_pred ccccHHHHHHHHHHHHhcCCCceEEEEECHHHHHHHHHhcCC--CCCEEEEcCCcccHHHHHHHhhhcc-----------
Confidence 333456665555554 456899999999999997777643 4999999998776432111000000
Q ss_pred hhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCC
Q 020067 173 FRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFP 252 (331)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (331)
+ ..++..... ..+.... .. .. ...+..... ...+..
T Consensus 155 ~-~~~p~~~lp-------~~~d~~g----~~----------------l~--------~~~f~~~~~--------~~~~~~ 190 (307)
T PRK13604 155 Y-LSLPIDELP-------EDLDFEG----HN----------------LG--------SEVFVTDCF--------KHGWDT 190 (307)
T ss_pred c-ccCcccccc-------ccccccc----cc----------------cc--------HHHHHHHHH--------hcCccc
Confidence 0 000000000 0000000 00 00 000000000 000000
Q ss_pred CcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCC--CCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhhh
Q 020067 253 SDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWP--EADFKVVADAGHSANEPGIAAELVATNEKLKNLIK 328 (331)
Q Consensus 253 ~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~ 328 (331)
.....+.+.++ ++|+|+|||++|.+||++.++.+.+.++ +++++++||++|.+... .-.+++|.+.+.
T Consensus 191 -~~s~i~~~~~l-~~PvLiIHG~~D~lVp~~~s~~l~e~~~s~~kkl~~i~Ga~H~l~~~------~~~~~~~~~~~~ 260 (307)
T PRK13604 191 -LDSTINKMKGL-DIPFIAFTANNDSWVKQSEVIDLLDSIRSEQCKLYSLIGSSHDLGEN------LVVLRNFYQSVT 260 (307)
T ss_pred -cccHHHHHhhc-CCCEEEEEcCCCCccCHHHHHHHHHHhccCCcEEEEeCCCccccCcc------hHHHHHHHHHHH
Confidence 12233456778 5999999999999999999999999884 79999999999998654 345677777654
No 49
>PRK10985 putative hydrolase; Provisional
Probab=99.95 E-value=4.1e-26 Score=183.95 Aligned_cols=277 Identities=12% Similarity=0.031 Sum_probs=154.1
Q ss_pred CCccceeEeCCCceEEEEeC--C--CCCCCcEEEeccCCCCCCC---CCcccccCCCCcEEEEecCCCCCCCCCCC--CC
Q 020067 21 PYSTGILKVSDIHTIYWEQS--G--NPTGHPVVFLHGGPGGGTT---PSNRRFFDPDFYRIILFDQRGAGKSTPHA--CL 91 (331)
Q Consensus 21 ~~~~~~~~~~~g~~l~~~~~--g--~~~~~~vl~~HG~~~~~~~---~~~~~~~~~~g~~vi~~D~~G~G~s~~~~--~~ 91 (331)
......+++.||..+.+... + ++++|+||++||++++... ..++..+.++||+|+++|+||||.+.... ..
T Consensus 30 ~~~~~~~~~~dg~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~~~ 109 (324)
T PRK10985 30 TPYWQRLELPDGDFVDLAWSEDPAQARHKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHRIY 109 (324)
T ss_pred CcceeEEECCCCCEEEEecCCCCccCCCCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcceE
Confidence 44556788899866654322 1 1246789999998665332 23556677899999999999999875321 11
Q ss_pred CccchHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCc--eeeEEEeccccchhhhhhhHhhcccccCChhh
Q 020067 92 DQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDK--VTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDA 169 (331)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~--v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (331)
.....+|+...+..+.+.++..+++++||||||.+++.++..+++. +.++|+++++.........+.. ... ..
T Consensus 110 ~~~~~~D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~~~~~~-~~~----~~ 184 (324)
T PRK10985 110 HSGETEDARFFLRWLQREFGHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACSYRMEQ-GFS----RV 184 (324)
T ss_pred CCCchHHHHHHHHHHHHhCCCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHHHHHhh-hHH----HH
Confidence 1112344444445555566777999999999999988888877544 8899999887653321111100 000 00
Q ss_pred HHhhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCC-ccHHHHHHhhhhhhhhhcc
Q 020067 170 WESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGE-DDIFSLAFARIENHYFLNK 248 (331)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 248 (331)
+.... ....... .......+... ...+.+.+.... ...+-..+......+....
T Consensus 185 ~~~~l---~~~l~~~-~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~fd~~~~~~~~g~~~~~ 239 (324)
T PRK10985 185 YQRYL---LNLLKAN-AARKLAAYPGT---------------------LPINLAQLKSVRRLREFDDLITARIHGFADAI 239 (324)
T ss_pred HHHHH---HHHHHHH-HHHHHHhcccc---------------------ccCCHHHHhcCCcHHHHhhhheeccCCCCCHH
Confidence 00000 0000000 00000000000 000010000000 0000000000000000000
Q ss_pred CCCCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCc----hhHHHHHHHHHH
Q 020067 249 GFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGI----AAELVATNEKLK 324 (331)
Q Consensus 249 ~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~----~~~~~~~i~~fl 324 (331)
.++. ..+..+.+.++ ++|+++|+|++|++++++....+.+..+++++++++++||+.+.+.. ....-+.+.+|+
T Consensus 240 ~~y~-~~~~~~~l~~i-~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~ 317 (324)
T PRK10985 240 DYYR-QCSALPLLNQI-RKPTLIIHAKDDPFMTHEVIPKPESLPPNVEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWL 317 (324)
T ss_pred HHHH-HCChHHHHhCC-CCCEEEEecCCCCCCChhhChHHHHhCCCeEEEECCCCCceeeCCCCCCCCCccHHHHHHHHH
Confidence 0000 12234677889 59999999999999998888888777889999999999999887641 245677788888
Q ss_pred Hhhhc
Q 020067 325 NLIKN 329 (331)
Q Consensus 325 ~~~~~ 329 (331)
+...+
T Consensus 318 ~~~~~ 322 (324)
T PRK10985 318 TTYLE 322 (324)
T ss_pred HHhhc
Confidence 76543
No 50
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.94 E-value=2.8e-25 Score=183.06 Aligned_cols=238 Identities=11% Similarity=0.051 Sum_probs=143.7
Q ss_pred CCccceeEeCCCceEEEEeC---CCCCCCcEEEeccCCCC--CCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccc
Q 020067 21 PYSTGILKVSDIHTIYWEQS---GNPTGHPVVFLHGGPGG--GTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNT 95 (331)
Q Consensus 21 ~~~~~~~~~~~g~~l~~~~~---g~~~~~~vl~~HG~~~~--~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~ 95 (331)
+.+...+...+|.++...-. +....|+||++||+.+. ..+......+.+.||+|+++|+||+|.|.... ...+
T Consensus 167 ~~e~v~i~~~~g~~l~g~l~~P~~~~~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~--~~~d 244 (414)
T PRK05077 167 ELKELEFPIPGGGPITGFLHLPKGDGPFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWK--LTQD 244 (414)
T ss_pred ceEEEEEEcCCCcEEEEEEEECCCCCCccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCC--cccc
Confidence 45566667777756653322 22233455554444432 23444566777899999999999999997532 1223
Q ss_pred hHHHHHHHHHHHHHh---CCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHh
Q 020067 96 TWDLIDDIEKLRQHL---EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWES 172 (331)
Q Consensus 96 ~~~~~~~~~~~~~~~---~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (331)
......++.+.+... +.+++.++|||+||.+++.+|..+|++++++|+++++....... ...+
T Consensus 245 ~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~~------------~~~~-- 310 (414)
T PRK05077 245 SSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLTD------------PKRQ-- 310 (414)
T ss_pred HHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccchhhcc------------hhhh--
Confidence 344445555555444 55789999999999999999999999999999998865311000 0000
Q ss_pred hhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCC
Q 020067 173 FRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFP 252 (331)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (331)
..++.. ....+...+... ..+.+ .+...+... .. .
T Consensus 311 --~~~p~~----~~~~la~~lg~~----------------------~~~~~--------~l~~~l~~~--------sl-~ 345 (414)
T PRK05077 311 --QQVPEM----YLDVLASRLGMH----------------------DASDE--------ALRVELNRY--------SL-K 345 (414)
T ss_pred --hhchHH----HHHHHHHHhCCC----------------------CCChH--------HHHHHhhhc--------cc-h
Confidence 000000 000000000000 00000 000000000 00 0
Q ss_pred CcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhh
Q 020067 253 SDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNLI 327 (331)
Q Consensus 253 ~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 327 (331)
.... ...++ ++|+|+|+|++|+++|++.++.+.+..++.+++++|++ ++.+. ++++++.+.+||++.
T Consensus 346 -~~~~--l~~~i-~~PvLiI~G~~D~ivP~~~a~~l~~~~~~~~l~~i~~~---~~~e~-~~~~~~~i~~wL~~~ 412 (414)
T PRK05077 346 -VQGL--LGRRC-PTPMLSGYWKNDPFSPEEDSRLIASSSADGKLLEIPFK---PVYRN-FDKALQEISDWLEDR 412 (414)
T ss_pred -hhhh--hccCC-CCcEEEEecCCCCCCCHHHHHHHHHhCCCCeEEEccCC---CccCC-HHHHHHHHHHHHHHH
Confidence 0000 11467 59999999999999999999999998999999999986 34454 999999999999764
No 51
>PLN02872 triacylglycerol lipase
Probab=99.94 E-value=1e-25 Score=183.11 Aligned_cols=306 Identities=10% Similarity=-0.017 Sum_probs=166.2
Q ss_pred CCCCCccceeEeCCCceEEEEeCCC-------CCCCcEEEeccCCCCCCCCC-------cccccCCCCcEEEEecCCCCC
Q 020067 18 YVEPYSTGILKVSDIHTIYWEQSGN-------PTGHPVVFLHGGPGGGTTPS-------NRRFFDPDFYRIILFDQRGAG 83 (331)
Q Consensus 18 ~~~~~~~~~~~~~~g~~l~~~~~g~-------~~~~~vl~~HG~~~~~~~~~-------~~~~~~~~g~~vi~~D~~G~G 83 (331)
...+.+++.+++.||..|......+ .++|+|+++||+..++..|. +...++++||+|+++|+||++
T Consensus 40 ~gy~~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~ 119 (395)
T PLN02872 40 AGYSCTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTR 119 (395)
T ss_pred cCCCceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHhCCCCcccccccccc
Confidence 3578899999999999888766421 23678999999765544432 122355689999999999987
Q ss_pred CCCC-------CCCCCccchHHHH-HHHHHHHHHh---CCCcEEEEEeChhHHHHHHHHHhCCC---ceeeEEEeccccc
Q 020067 84 KSTP-------HACLDQNTTWDLI-DDIEKLRQHL---EIPEWQVFGGSWGSTLALAYSLAHPD---KVTGLVLRGIFLL 149 (331)
Q Consensus 84 ~s~~-------~~~~~~~~~~~~~-~~~~~~~~~~---~~~~v~lvG~S~Gg~~a~~~a~~~p~---~v~~li~~~~~~~ 149 (331)
.|.. ......+++++++ .|+.++++.+ ..++++++||||||.+++.++ .+|+ +|+.+++++|...
T Consensus 120 ~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~~~ 198 (395)
T PLN02872 120 WSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITNSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCPISY 198 (395)
T ss_pred cccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhccCCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcchhh
Confidence 6532 1111246788888 7999998886 347999999999999998555 5776 6888888888765
Q ss_pred hhhhhhhHhhcccccCChhhHHhhh---ccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHH------hhhcCCC
Q 020067 150 RKKEIDWFYEGGAAAIYPDAWESFR---DLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEM------MTAHLLP 220 (331)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 220 (331)
.......+..... ......+.... ...+. ...+..+...+.... ..-......+..+.. .......
T Consensus 199 ~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~---~~~~~~~~~~~C~~~-~~c~~~~~~~~g~~~~~n~~~~~~~~~~ 273 (395)
T PLN02872 199 LDHVTAPLVLRMV-FMHLDQMVVAMGIHQLNFR---SDVLVKLLDSICEGH-MDCNDLLTSITGTNCCFNASRIDYYLEY 273 (395)
T ss_pred hccCCCHHHHHHH-HHhHHHHHHHhcCceecCC---cHHHHHHHHHHccCc-hhHHHHHHHHhCCCcccchhhhhHHHhc
Confidence 3211111100000 00000000000 00000 001111111111000 000000000000000 0000000
Q ss_pred ChhhhhcCCccHHHHHHhhhhhhhhh-----ccCCCCCcchhhhhccccc-cccEEEEecCCCCccCCcchHHHHHhCCC
Q 020067 221 NEENIKRGEDDIFSLAFARIENHYFL-----NKGFFPSDSFLLDNIDNIR-HINATIVQGRYDVCCPMMSAWDLHKAWPE 294 (331)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~i~-~~P~l~i~G~~D~~~~~~~~~~~~~~~~~ 294 (331)
.|..........+.+.........|. +...+.......-.+.+++ ++|+++++|++|.+++++.++.+.+.+++
T Consensus 274 ~pagtS~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~ 353 (395)
T PLN02872 274 EPHPSSVKNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVTDVEHTLAELPS 353 (395)
T ss_pred CCCcchHHHHHHHHHHHhcCCcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCHHHHHHHHHHCCC
Confidence 00000000001112221111111110 0000110111122566662 37999999999999999999999999987
Q ss_pred -CcEEEecCCCCC--CCcCCchhHHHHHHHHHHHhhhc
Q 020067 295 -ADFKVVADAGHS--ANEPGIAAELVATNEKLKNLIKN 329 (331)
Q Consensus 295 -~~~~~~~~~gH~--~~~~~~~~~~~~~i~~fl~~~~~ 329 (331)
.+++.++++||. ++.++.++++.+.|.+|+++..+
T Consensus 354 ~~~l~~l~~~gH~dfi~~~eape~V~~~Il~fL~~~~~ 391 (395)
T PLN02872 354 KPELLYLENYGHIDFLLSTSAKEDVYNHMIQFFRSLGK 391 (395)
T ss_pred ccEEEEcCCCCCHHHHhCcchHHHHHHHHHHHHHHhhh
Confidence 688899999996 33333499999999999987654
No 52
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.93 E-value=1e-24 Score=165.89 Aligned_cols=253 Identities=15% Similarity=0.133 Sum_probs=154.6
Q ss_pred CCCCcEEEeccCCCCCC-CCCcccccCC-CCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhC----CCcEE
Q 020067 43 PTGHPVVFLHGGPGGGT-TPSNRRFFDP-DFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLE----IPEWQ 116 (331)
Q Consensus 43 ~~~~~vl~~HG~~~~~~-~~~~~~~~~~-~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~ 116 (331)
...|+++++||..++.. |..+...+.. -+-.|+++|.|.||.|.... ..+...+++|+..+++..+ ..+++
T Consensus 50 ~~~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~---~h~~~~ma~dv~~Fi~~v~~~~~~~~~~ 126 (315)
T KOG2382|consen 50 ERAPPAIILHGLLGSKENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKIT---VHNYEAMAEDVKLFIDGVGGSTRLDPVV 126 (315)
T ss_pred CCCCceEEecccccCCCCHHHHHHHhcccccCceEEEecccCCCCcccc---ccCHHHHHHHHHHHHHHcccccccCCce
Confidence 46799999999666644 4444444433 46799999999999998765 5679999999999999985 56899
Q ss_pred EEEeChhH-HHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCC----cchhhhhHHhhcc
Q 020067 117 VFGGSWGS-TLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIP----ENERSCFVDAYSK 191 (331)
Q Consensus 117 lvG~S~Gg-~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 191 (331)
++|||||| .+++..+...|+.+..+|+++..+...... .......+..+...-. ...+......+..
T Consensus 127 l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~--------~~e~~e~i~~m~~~d~~~~~~~~rke~~~~l~~ 198 (315)
T KOG2382|consen 127 LLGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRS--------YGEYRELIKAMIQLDLSIGVSRGRKEALKSLIE 198 (315)
T ss_pred ecccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcc--------cchHHHHHHHHHhccccccccccHHHHHHHHHH
Confidence 99999999 888888888999999999998655211000 0000001111100000 0111111111111
Q ss_pred ccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEE
Q 020067 192 RLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATI 271 (331)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~ 271 (331)
.... .....|...... ....+....-..........+.... ......++ .. ... ..|||+
T Consensus 199 ~~~d-------~~~~~fi~~nl~--~~~~~~s~~w~~nl~~i~~~~~~~~--------~~s~~~~l-~~-~~~-~~pvlf 258 (315)
T KOG2382|consen 199 VGFD-------NLVRQFILTNLK--KSPSDGSFLWRVNLDSIASLLDEYE--------ILSYWADL-ED-GPY-TGPVLF 258 (315)
T ss_pred Hhcc-------hHHHHHHHHhcC--cCCCCCceEEEeCHHHHHHHHHHHH--------hhcccccc-cc-ccc-ccceeE
Confidence 0000 000011100000 0001111111112222222222211 00001111 12 344 599999
Q ss_pred EecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhh
Q 020067 272 VQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNLI 327 (331)
Q Consensus 272 i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 327 (331)
+.|.++..++.+.-.++.+.+|++++++++++||+++.|+ |+++++.|.+|+.+.
T Consensus 259 i~g~~S~fv~~~~~~~~~~~fp~~e~~~ld~aGHwVh~E~-P~~~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 259 IKGLQSKFVPDEHYPRMEKIFPNVEVHELDEAGHWVHLEK-PEEFIESISEFLEEP 313 (315)
T ss_pred EecCCCCCcChhHHHHHHHhccchheeecccCCceeecCC-HHHHHHHHHHHhccc
Confidence 9999999999998999999999999999999999999998 999999999999764
No 53
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.93 E-value=1e-24 Score=171.49 Aligned_cols=231 Identities=14% Similarity=0.092 Sum_probs=137.3
Q ss_pred CCCcEEEeccCCCCC--C---CCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHh-----CCC
Q 020067 44 TGHPVVFLHGGPGGG--T---TPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHL-----EIP 113 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~--~---~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 113 (331)
++++||++||+.+.. . +..++..+.++||+|+++|+||||.|.... .+++++.+|+.++++.+ +.+
T Consensus 25 ~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~----~~~~~~~~d~~~~~~~l~~~~~g~~ 100 (274)
T TIGR03100 25 HTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGEN----LGFEGIDADIAAAIDAFREAAPHLR 100 (274)
T ss_pred CCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC----CCHHHHHHHHHHHHHHHHhhCCCCC
Confidence 456788888865432 1 223456676789999999999999987532 35667777887777766 567
Q ss_pred cEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHh-hhccCCcchhhhhHHhhccc
Q 020067 114 EWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWES-FRDLIPENERSCFVDAYSKR 192 (331)
Q Consensus 114 ~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 192 (331)
+++++||||||.+++.+|.. +++++++|+++|........ ....... +...... ..++..+...
T Consensus 101 ~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~~~~~~-----------~~~~~~~~~~~~~~~---~~~~~~~~~g 165 (274)
T TIGR03100 101 RIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVRTEAAQ-----------AASRIRHYYLGQLLS---ADFWRKLLSG 165 (274)
T ss_pred cEEEEEECHHHHHHHHHhhh-CCCccEEEEECCccCCcccc-----------hHHHHHHHHHHHHhC---hHHHHHhcCC
Confidence 89999999999999999765 46899999999864321100 0000000 0000000 0010100000
Q ss_pred cCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEE
Q 020067 193 LNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIV 272 (331)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i 272 (331)
.... ......... ............. ......++...+.++ ++|+|++
T Consensus 166 ---~~~~--~~~~~~~~~--~~~~~~~~~~~~~------------------------~~~~~~~~~~~l~~~-~~P~ll~ 213 (274)
T TIGR03100 166 ---EVNL--GSSLRGLGD--ALLKARQKGDEVA------------------------HGGLAERMKAGLERF-QGPVLFI 213 (274)
T ss_pred ---CccH--HHHHHHHHH--HHHhhhhcCCCcc------------------------cchHHHHHHHHHHhc-CCcEEEE
Confidence 0000 000000000 0000000000000 000033455677788 6999999
Q ss_pred ecCCCCccCCcch------HHHHHhC--CCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHh
Q 020067 273 QGRYDVCCPMMSA------WDLHKAW--PEADFKVVADAGHSANEPGIAAELVATNEKLKNL 326 (331)
Q Consensus 273 ~G~~D~~~~~~~~------~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 326 (331)
+|++|...+ ... ..+.+.+ ++++++.+++++|++..+..++++.+.|.+||++
T Consensus 214 ~g~~D~~~~-~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~~ 274 (274)
T TIGR03100 214 LSGNDLTAQ-EFADSVLGEPAWRGALEDPGIERVEIDGADHTFSDRVWREWVAARTTEWLRR 274 (274)
T ss_pred EcCcchhHH-HHHHHhccChhhHHHhhcCCeEEEecCCCCcccccHHHHHHHHHHHHHHHhC
Confidence 999999864 222 4555545 7899999999999997776689999999999964
No 54
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.93 E-value=6.5e-25 Score=169.76 Aligned_cols=226 Identities=25% Similarity=0.239 Sum_probs=134.0
Q ss_pred cEEEEecCCCCCCCCC--CCCCCccchHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccc
Q 020067 72 YRIILFDQRGAGKSTP--HACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLL 149 (331)
Q Consensus 72 ~~vi~~D~~G~G~s~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~ 149 (331)
|+|+++|+||+|.|++ ......++.+++++++..+++.++.++++++||||||.+++.+|+.+|++|+++|+++++..
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~~~ 80 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPERVKKLVLISPPPD 80 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESSH
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCchhhcCcEEEeeecc
Confidence 7899999999999995 24456789999999999999999999999999999999999999999999999999998631
Q ss_pred hhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCC
Q 020067 150 RKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGE 229 (331)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (331)
......+..... ............................. ......... ........ ........
T Consensus 81 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~-~~~~~~~~--~~~~~~~~ 146 (230)
T PF00561_consen 81 LPDGLWNRIWPR--GNLQGQLLDNFFNFLSDPIKPLLGRWPKQ---------FFAYDREFV-EDFLKQFQ--SQQYARFA 146 (230)
T ss_dssp HHHHHHHHCHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHH-HTHHHHHH--HHHHHHTC
T ss_pred chhhhhHHHHhh--hhhhhhHHHhhhccccccchhhhhhhhhh---------eeeccCccc-cchhhccc--hhhhhHHH
Confidence 000000000000 00000000000000000000000000000 000000000 00000000 00000000
Q ss_pred -ccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCC
Q 020067 230 -DDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSAN 308 (331)
Q Consensus 230 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 308 (331)
.......+... .... ...+....+.++ ++|+|+++|++|.++|++....+.+.+|+.++++++++||+.+
T Consensus 147 ~~~~~~~~~~~~-------~~~~-~~~~~~~~l~~i-~~p~l~i~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~GH~~~ 217 (230)
T PF00561_consen 147 ETDAFDNMFWNA-------LGYF-SVWDPSPALSNI-KVPTLIIWGEDDPLVPPESSEQLAKLIPNSQLVLIEGSGHFAF 217 (230)
T ss_dssp HHHHHHHHHHHH-------HHHH-HHHHHHHHHTTT-TSEEEEEEETTCSSSHHHHHHHHHHHSTTEEEEEETTCCSTHH
T ss_pred HHHHHhhhcccc-------cccc-cccccccccccc-CCCeEEEEeCCCCCCCHHHHHHHHHhcCCCEEEECCCCChHHH
Confidence 00000000000 0000 034455678889 6999999999999999999999999999999999999999999
Q ss_pred cCCchhHHHHHHH
Q 020067 309 EPGIAAELVATNE 321 (331)
Q Consensus 309 ~~~~~~~~~~~i~ 321 (331)
.++ ++++.+.|.
T Consensus 218 ~~~-~~~~~~~i~ 229 (230)
T PF00561_consen 218 LEG-PDEFNEIII 229 (230)
T ss_dssp HHS-HHHHHHHHH
T ss_pred hcC-HHhhhhhhc
Confidence 997 888888775
No 55
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.91 E-value=2.6e-23 Score=169.69 Aligned_cols=102 Identities=18% Similarity=0.112 Sum_probs=79.9
Q ss_pred CCCcEEEeccCCCCCCC------CCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHH-----HHHHHHHHHhCC
Q 020067 44 TGHPVVFLHGGPGGGTT------PSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLI-----DDIEKLRQHLEI 112 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~~------~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 112 (331)
.++|||++||...+... ..++..+.++||+|+++|++|+|.+.... ++++++ +.+..+++..+.
T Consensus 61 ~~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~~-----~~~d~~~~~~~~~v~~l~~~~~~ 135 (350)
T TIGR01836 61 HKTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRYL-----TLDDYINGYIDKCVDYICRTSKL 135 (350)
T ss_pred CCCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhcC-----CHHHHHHHHHHHHHHHHHHHhCC
Confidence 35689999996544333 35677777899999999999999876433 444443 345556666788
Q ss_pred CcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccch
Q 020067 113 PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLR 150 (331)
Q Consensus 113 ~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~ 150 (331)
++++++||||||.+++.+++.+|++++++|+++++...
T Consensus 136 ~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~ 173 (350)
T TIGR01836 136 DQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDF 173 (350)
T ss_pred CcccEEEECHHHHHHHHHHHhCchheeeEEEecccccc
Confidence 89999999999999999999999999999999987754
No 56
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.91 E-value=5.2e-23 Score=171.91 Aligned_cols=260 Identities=11% Similarity=0.001 Sum_probs=145.8
Q ss_pred CCCcEEEeccCCCCCCCC------CcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCcEEE
Q 020067 44 TGHPVVFLHGGPGGGTTP------SNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQV 117 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~~~------~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l 117 (331)
.++|||++||+.+....+ .++..+.++||+|+++|++|+|.+.......+|..+.+.+++..+++.++.+++++
T Consensus 187 ~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~~ddY~~~~i~~al~~v~~~~g~~kv~l 266 (532)
T TIGR01838 187 HKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKTFDDYIRDGVIAALEVVEAITGEKQVNC 266 (532)
T ss_pred CCCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCChhhhHHHHHHHHHHHHHHhcCCCCeEE
Confidence 467899999987665544 36777888999999999999999876544445666678888888888899999999
Q ss_pred EEeChhHHHHH----HHHHhC-CCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhccc
Q 020067 118 FGGSWGSTLAL----AYSLAH-PDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKR 192 (331)
Q Consensus 118 vG~S~Gg~~a~----~~a~~~-p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (331)
+||||||.++. .+++.+ +++++++++++++........ +... .........+........ .....+...+..
T Consensus 267 vG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G~-l~~f-~~~~~~~~~e~~~~~~G~-lpg~~m~~~F~~ 343 (532)
T TIGR01838 267 VGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPGE-LGVF-VDEEIVAGIERQNGGGGY-LDGRQMAVTFSL 343 (532)
T ss_pred EEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcch-hhhh-cCchhHHHHHHHHHhcCC-CCHHHHHHHHHh
Confidence 99999999852 245555 789999999998765432100 0000 000000000000000000 000111111111
Q ss_pred cCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCC---cchhhhhccccccccE
Q 020067 193 LNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPS---DSFLLDNIDNIRHINA 269 (331)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~i~~~P~ 269 (331)
+...+...... ...+. ........+-........+.-...+...-...|....+... ..+....+.+| ++|+
T Consensus 344 lrp~~l~w~~~-v~~yl---~g~~~~~fdll~Wn~D~t~lP~~~~~~~lr~ly~~N~L~~G~~~v~g~~~dL~~I-~vPv 418 (532)
T TIGR01838 344 LRENDLIWNYY-VDNYL---KGKSPVPFDLLFWNSDSTNLPGKMHNFYLRNLYLQNALTTGGLEVCGVRLDLSKV-KVPV 418 (532)
T ss_pred cChhhHHHHHH-HHHHh---cCCCccchhHHHHhccCccchHHHHHHHHHHHHhcCCCcCCeeEECCEecchhhC-CCCE
Confidence 11110000000 00000 00000000000000001111111111121222222222221 23345688999 5999
Q ss_pred EEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCC
Q 020067 270 TIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPG 311 (331)
Q Consensus 270 l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 311 (331)
|+|+|++|.++|++.+..+.+.+++.+..+++++||..+.++
T Consensus 419 LvV~G~~D~IvP~~sa~~l~~~i~~~~~~vL~~sGHi~~ien 460 (532)
T TIGR01838 419 YIIATREDHIAPWQSAYRGAALLGGPKTFVLGESGHIAGVVN 460 (532)
T ss_pred EEEeeCCCCcCCHHHHHHHHHHCCCCEEEEECCCCCchHhhC
Confidence 999999999999999999999999999999999999987653
No 57
>PRK11071 esterase YqiA; Provisional
Probab=99.91 E-value=6.1e-24 Score=156.79 Aligned_cols=183 Identities=12% Similarity=0.008 Sum_probs=121.3
Q ss_pred CcEEEeccCCCCCCCCC--cc-cccCC--CCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCcEEEEEe
Q 020067 46 HPVVFLHGGPGGGTTPS--NR-RFFDP--DFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGG 120 (331)
Q Consensus 46 ~~vl~~HG~~~~~~~~~--~~-~~~~~--~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG~ 120 (331)
|+||++||++++...+. .. ..+.+ .+|+|+++|+||+| +++++++.++++.++.++++++||
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~-------------~~~~~~l~~l~~~~~~~~~~lvG~ 68 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP-------------ADAAELLESLVLEHGGDPLGLVGS 68 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH-------------HHHHHHHHHHHHHcCCCCeEEEEE
Confidence 67999999887766543 22 33322 48999999999984 367889999999999999999999
Q ss_pred ChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhccccCCCchHH
Q 020067 121 SWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKET 200 (331)
Q Consensus 121 S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (331)
||||.+++.+|.++|. ++|+++|+..+......+. ... ........
T Consensus 69 S~Gg~~a~~~a~~~~~---~~vl~~~~~~~~~~~~~~~-------------------~~~---------~~~~~~~~--- 114 (190)
T PRK11071 69 SLGGYYATWLSQCFML---PAVVVNPAVRPFELLTDYL-------------------GEN---------ENPYTGQQ--- 114 (190)
T ss_pred CHHHHHHHHHHHHcCC---CEEEECCCCCHHHHHHHhc-------------------CCc---------ccccCCCc---
Confidence 9999999999999983 4688887654211110000 000 00000000
Q ss_pred HHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCCCcc
Q 020067 201 QYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCC 280 (331)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~ 280 (331)
...... +..... ..+.. .+. . .+|+++++|++|+++
T Consensus 115 -----------------~~~~~~---------~~~d~~---------------~~~~~-~i~-~-~~~v~iihg~~De~V 150 (190)
T PRK11071 115 -----------------YVLESR---------HIYDLK---------------VMQID-PLE-S-PDLIWLLQQTGDEVL 150 (190)
T ss_pred -----------------EEEcHH---------HHHHHH---------------hcCCc-cCC-C-hhhEEEEEeCCCCcC
Confidence 000000 000000 00111 122 4 589999999999999
Q ss_pred CCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHH
Q 020067 281 PMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKN 325 (331)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~ 325 (331)
|++.+.++.+. ++.++++|++|.+ .. .+++.+.+.+|++
T Consensus 151 ~~~~a~~~~~~---~~~~~~~ggdH~f--~~-~~~~~~~i~~fl~ 189 (190)
T PRK11071 151 DYRQAVAYYAA---CRQTVEEGGNHAF--VG-FERYFNQIVDFLG 189 (190)
T ss_pred CHHHHHHHHHh---cceEEECCCCcch--hh-HHHhHHHHHHHhc
Confidence 99999988884 5778889999998 32 5889999999975
No 58
>PRK10566 esterase; Provisional
Probab=99.91 E-value=8.3e-23 Score=159.57 Aligned_cols=217 Identities=16% Similarity=0.102 Sum_probs=125.6
Q ss_pred CCceEEEEeCCC--CCCCcEEEeccCCCCCC-CCCcccccCCCCcEEEEecCCCCCCCCCCCCCCcc-----chHHHHHH
Q 020067 31 DIHTIYWEQSGN--PTGHPVVFLHGGPGGGT-TPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQN-----TTWDLIDD 102 (331)
Q Consensus 31 ~g~~l~~~~~g~--~~~~~vl~~HG~~~~~~-~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~-----~~~~~~~~ 102 (331)
+...++|...+. +..|+||++||++++.. +...+..+.++||+|+++|+||||.+......... ...+..+|
T Consensus 11 ~~~~~~~~p~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~ 90 (249)
T PRK10566 11 GIEVLHAFPAGQRDTPLPTVFFYHGFTSSKLVYSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQE 90 (249)
T ss_pred CcceEEEcCCCCCCCCCCEEEEeCCCCcccchHHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHH
Confidence 333455665542 34578999999876644 44466667778999999999999976422110010 01112333
Q ss_pred HHHHHHH------hCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhcc
Q 020067 103 IEKLRQH------LEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDL 176 (331)
Q Consensus 103 ~~~~~~~------~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (331)
+.++++. ++.++++++|||+||.+++.++.++|+...+++++++..... +..
T Consensus 91 ~~~~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~~~~------------------~~~---- 148 (249)
T PRK10566 91 FPTLRAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSGYFTS------------------LAR---- 148 (249)
T ss_pred HHHHHHHHHhcCCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcHHHHH------------------HHH----
Confidence 3333333 345689999999999999999999886444444444321100 000
Q ss_pred CCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcch
Q 020067 177 IPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSF 256 (331)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (331)
................ +...+.... ..+
T Consensus 149 -----------~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~------------~~~ 176 (249)
T PRK10566 149 -----------TLFPPLIPETAAQQAE-----------------------------FNNIVAPLA------------EWE 176 (249)
T ss_pred -----------HhcccccccccccHHH-----------------------------HHHHHHHHh------------hcC
Confidence 0000000000000000 000000000 111
Q ss_pred hhhhccccccccEEEEecCCCCccCCcchHHHHHhCCC------CcEEEecCCCCCCCcCCchhHHHHHHHHHHHh
Q 020067 257 LLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPE------ADFKVVADAGHSANEPGIAAELVATNEKLKNL 326 (331)
Q Consensus 257 ~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~------~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 326 (331)
....+.++.++|+|+++|++|.++|++.++.+.+.++. +++..++++||.+. ....+.+.+||++
T Consensus 177 ~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~H~~~-----~~~~~~~~~fl~~ 247 (249)
T PRK10566 177 VTHQLEQLADRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWEPGVRHRIT-----PEALDAGVAFFRQ 247 (249)
T ss_pred hhhhhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEecCCCCCccC-----HHHHHHHHHHHHh
Confidence 22334454148999999999999999999999887742 46778899999873 2357888888875
No 59
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.89 E-value=1.1e-21 Score=144.07 Aligned_cols=215 Identities=17% Similarity=0.137 Sum_probs=144.5
Q ss_pred CCccceeEeCCCceEEEE-eCCCCC-CCcEEEeccCCCC-CCCCCcccccC-CCCcEEEEecCCCCCCCCCCCCCCccch
Q 020067 21 PYSTGILKVSDIHTIYWE-QSGNPT-GHPVVFLHGGPGG-GTTPSNRRFFD-PDFYRIILFDQRGAGKSTPHACLDQNTT 96 (331)
Q Consensus 21 ~~~~~~~~~~~g~~l~~~-~~g~~~-~~~vl~~HG~~~~-~~~~~~~~~~~-~~g~~vi~~D~~G~G~s~~~~~~~~~~~ 96 (331)
..+...+.++.|-.+... ...+.. .+++|++||.... +....+...+. .-+++|+.+|++|+|.|.+.+.. ....
T Consensus 34 ~v~v~~~~t~rgn~~~~~y~~~~~~~~~~lly~hGNa~Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE-~n~y 112 (258)
T KOG1552|consen 34 FVEVFKVKTSRGNEIVCMYVRPPEAAHPTLLYSHGNAADLGQMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSE-RNLY 112 (258)
T ss_pred ccceEEeecCCCCEEEEEEEcCccccceEEEEcCCcccchHHHHHHHHHHhhcccceEEEEecccccccCCCccc-ccch
Confidence 344455566655343222 222223 4789999997433 21122222221 24899999999999999977632 2334
Q ss_pred HHHHHHHHHHHHHhC-CCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhc
Q 020067 97 WDLIDDIEKLRQHLE-IPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRD 175 (331)
Q Consensus 97 ~~~~~~~~~~~~~~~-~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (331)
+|.-+..+.+.+..| .++++|+|+|+|+..++.+|.+.| ++++|+.+|.....+..
T Consensus 113 ~Di~avye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL~SPf~S~~rv~--------------------- 169 (258)
T KOG1552|consen 113 ADIKAVYEWLRNRYGSPERIILYGQSIGTVPTVDLASRYP--LAAVVLHSPFTSGMRVA--------------------- 169 (258)
T ss_pred hhHHHHHHHHHhhcCCCceEEEEEecCCchhhhhHhhcCC--cceEEEeccchhhhhhh---------------------
Confidence 444444445555554 678999999999999999999998 99999999865432110
Q ss_pred cCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcc
Q 020067 176 LIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDS 255 (331)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (331)
..... .. .++. .+
T Consensus 170 --------------~~~~~---------------------------------------------------~~-~~~d-~f 182 (258)
T KOG1552|consen 170 --------------FPDTK---------------------------------------------------TT-YCFD-AF 182 (258)
T ss_pred --------------ccCcc---------------------------------------------------eE-Eeec-cc
Confidence 00000 00 0000 12
Q ss_pred hhhhhccccccccEEEEecCCCCccCCcchHHHHHhCCCC-cEEEecCCCCCCCcCCchhHHHHHHHHHHHhhhc
Q 020067 256 FLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEA-DFKVVADAGHSANEPGIAAELVATNEKLKNLIKN 329 (331)
Q Consensus 256 ~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~~ 329 (331)
...+.+..+ +||+|++||++|++++.....++.+..++. +..++.|+||.-..- ..++.+.+..|+..+.+
T Consensus 183 ~~i~kI~~i-~~PVLiiHgtdDevv~~sHg~~Lye~~k~~~epl~v~g~gH~~~~~--~~~yi~~l~~f~~~~~~ 254 (258)
T KOG1552|consen 183 PNIEKISKI-TCPVLIIHGTDDEVVDFSHGKALYERCKEKVEPLWVKGAGHNDIEL--YPEYIEHLRRFISSVLP 254 (258)
T ss_pred cccCcceec-cCCEEEEecccCceecccccHHHHHhccccCCCcEEecCCCccccc--CHHHHHHHHHHHHHhcc
Confidence 224567778 699999999999999999999999999764 888899999987554 67788999999987754
No 60
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.88 E-value=7.7e-21 Score=174.12 Aligned_cols=270 Identities=13% Similarity=0.094 Sum_probs=145.1
Q ss_pred CCCcEEEeccCCCCCCCCCc------ccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHH---hCCCc
Q 020067 44 TGHPVVFLHGGPGGGTTPSN------RRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQH---LEIPE 114 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~~~~~------~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 114 (331)
.++||||+||+..+...|.. +..+.++||+|+++|+ |.++.+......++.+++..+.+.++. +..++
T Consensus 66 ~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~~~~~~~~~l~~~i~~l~~~l~~v~~~~~~~ 142 (994)
T PRK07868 66 VGPPVLMVHPMMMSADMWDVTRDDGAVGILHRAGLDPWVIDF---GSPDKVEGGMERNLADHVVALSEAIDTVKDVTGRD 142 (994)
T ss_pred CCCcEEEECCCCCCccceecCCcccHHHHHHHCCCEEEEEcC---CCCChhHcCccCCHHHHHHHHHHHHHHHHHhhCCc
Confidence 56899999999888777664 3556678999999994 666554322235666666666555554 34468
Q ss_pred EEEEEeChhHHHHHHHHHhC-CCceeeEEEeccccchhhhhh-hHhh---cccccCChh-hHHhhhccCCcchhhhhHHh
Q 020067 115 WQVFGGSWGSTLALAYSLAH-PDKVTGLVLRGIFLLRKKEID-WFYE---GGAAAIYPD-AWESFRDLIPENERSCFVDA 188 (331)
Q Consensus 115 v~lvG~S~Gg~~a~~~a~~~-p~~v~~li~~~~~~~~~~~~~-~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 188 (331)
++++||||||.+++.+++.+ +++|+++|+++++........ .+.. ........+ .+.. ..++.. +...
T Consensus 143 v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~p~~----~~~~ 216 (994)
T PRK07868 143 VHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPMGIPAGLAAAAADFMADHVFNR--LDIPGW----MART 216 (994)
T ss_pred eEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcccchhhhhhcccccchhhhhhc--CCCCHH----HHHH
Confidence 99999999999999998755 568999999888754321100 0000 000000000 0000 000000 0000
Q ss_pred hccccCCCchHHHHHHHHHhhhHHHhhh-cCCCChhhhhcCCccH-H----HHHHhhhhhhhhhccCCCCCcchh---hh
Q 020067 189 YSKRLNSDDKETQYAAARAWTKWEMMTA-HLLPNEENIKRGEDDI-F----SLAFARIENHYFLNKGFFPSDSFL---LD 259 (331)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~---~~ 259 (331)
.+..+. . .........+. ..... ....+.+......... | ...+..+...++............ ..
T Consensus 217 ~~~~l~-p--~~~~~~~~~~~--~~l~~~~~~~~~e~~~~~~~~~~w~~~~g~~~~~~~~~~~~~n~~~~g~~~~~~~~~ 291 (994)
T PRK07868 217 GFQMLD-P--VKTAKARVDFL--RQLHDREALLPREQQRRFLESEGWIAWSGPAISELLKQFIAHNRMMTGGFAINGQMV 291 (994)
T ss_pred HHHhcC-h--hHHHHHHHHHH--HhcCchhhhccchhhHhHHHHhhccccchHHHHHHHHHHHHhCcccCceEEECCEEc
Confidence 000000 0 00000000000 00000 0000000000000000 0 000111111111111111111111 23
Q ss_pred hccccccccEEEEecCCCCccCCcchHHHHHhCCCCcE-EEecCCCCCCCc--CCchhHHHHHHHHHHHhhh
Q 020067 260 NIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADF-KVVADAGHSANE--PGIAAELVATNEKLKNLIK 328 (331)
Q Consensus 260 ~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~-~~~~~~gH~~~~--~~~~~~~~~~i~~fl~~~~ 328 (331)
.+.+| ++|+|+|+|++|.++|++.++.+.+.++++++ .+++++||+.+. ...++++...|.+||++-.
T Consensus 292 ~L~~i-~~P~L~i~G~~D~ivp~~~~~~l~~~i~~a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~~~ 362 (994)
T PRK07868 292 TLADI-TCPVLAFVGEVDDIGQPASVRGIRRAAPNAEVYESLIRAGHFGLVVGSRAAQQTWPTVADWVKWLE 362 (994)
T ss_pred chhhC-CCCEEEEEeCCCCCCCHHHHHHHHHhCCCCeEEEEeCCCCCEeeeechhhhhhhChHHHHHHHHhc
Confidence 58899 59999999999999999999999999999997 678999999754 3458889999999998754
No 61
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.87 E-value=4.9e-22 Score=140.57 Aligned_cols=221 Identities=17% Similarity=0.228 Sum_probs=150.4
Q ss_pred CCCccceeEeCCCceEE-EEeCCCCCCCcEEEeccCCCCCCCC-Ccc-cccCCCCcEEEEecCCCCCCCCCCCCCCccch
Q 020067 20 EPYSTGILKVSDIHTIY-WEQSGNPTGHPVVFLHGGPGGGTTP-SNR-RFFDPDFYRIILFDQRGAGKSTPHACLDQNTT 96 (331)
Q Consensus 20 ~~~~~~~~~~~~g~~l~-~~~~g~~~~~~vl~~HG~~~~~~~~-~~~-~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~ 96 (331)
.+++.-.+.+.|..++. |+.....+.|+++++|+..++-... ..+ ..+..-+.+|+.+++||+|.|.+.+. .
T Consensus 52 ~pye~i~l~T~D~vtL~a~~~~~E~S~pTlLyfh~NAGNmGhr~~i~~~fy~~l~mnv~ivsYRGYG~S~Gsps-----E 126 (300)
T KOG4391|consen 52 MPYERIELRTRDKVTLDAYLMLSESSRPTLLYFHANAGNMGHRLPIARVFYVNLKMNVLIVSYRGYGKSEGSPS-----E 126 (300)
T ss_pred CCceEEEEEcCcceeEeeeeecccCCCceEEEEccCCCcccchhhHHHHHHHHcCceEEEEEeeccccCCCCcc-----c
Confidence 56777788888888885 4444445789999999976653332 222 22335689999999999999997763 2
Q ss_pred HHHHHHHHHHHHHh------CCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhH
Q 020067 97 WDLIDDIEKLRQHL------EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAW 170 (331)
Q Consensus 97 ~~~~~~~~~~~~~~------~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (331)
+-+.-|-+++++.+ +..++++.|.|.||.+|+.+|++..+++.++|+-++....+.... ...+|
T Consensus 127 ~GL~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp~~~i-------~~v~p--- 196 (300)
T KOG4391|consen 127 EGLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIPHMAI-------PLVFP--- 196 (300)
T ss_pred cceeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeechhccchhhhh-------heecc---
Confidence 33344445555554 445899999999999999999999999999999988665321100 00000
Q ss_pred HhhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCC
Q 020067 171 ESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGF 250 (331)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (331)
+...+... |. ...
T Consensus 197 --------------~~~k~i~~---------------lc----~kn---------------------------------- 209 (300)
T KOG4391|consen 197 --------------FPMKYIPL---------------LC----YKN---------------------------------- 209 (300)
T ss_pred --------------chhhHHHH---------------HH----HHh----------------------------------
Confidence 00000000 00 000
Q ss_pred CCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCC--CCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhhh
Q 020067 251 FPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWP--EADFKVVADAGHSANEPGIAAELVATNEKLKNLIK 328 (331)
Q Consensus 251 ~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~ 328 (331)
.+.....+..- ..|.|++.|.+|.++||-..+.+.+..| +.++.++|++.|.-..- .+-+.+.|.+||.++-
T Consensus 210 ---~~~S~~ki~~~-~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~Krl~eFP~gtHNDT~i--~dGYfq~i~dFlaE~~ 283 (300)
T KOG4391|consen 210 ---KWLSYRKIGQC-RMPFLFISGLKDELVPPVMMRQLYELCPSRTKRLAEFPDGTHNDTWI--CDGYFQAIEDFLAEVV 283 (300)
T ss_pred ---hhcchhhhccc-cCceEEeecCccccCCcHHHHHHHHhCchhhhhheeCCCCccCceEE--eccHHHHHHHHHHHhc
Confidence 00011223334 5999999999999999999999999986 57899999999987543 4558899999998763
No 62
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.86 E-value=2.9e-20 Score=147.36 Aligned_cols=263 Identities=24% Similarity=0.258 Sum_probs=147.2
Q ss_pred CceEEEEeCCCCCCCcEEEeccCCCCCCCCCc----ccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHH
Q 020067 32 IHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSN----RRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLR 107 (331)
Q Consensus 32 g~~l~~~~~g~~~~~~vl~~HG~~~~~~~~~~----~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~ 107 (331)
...+.|...+.. +|+|+++||++++...+.. ....... |+++++|+||||.|. .. ......+++++..++
T Consensus 9 ~~~~~~~~~~~~-~~~i~~~hg~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~g~g~s~-~~---~~~~~~~~~~~~~~~ 82 (282)
T COG0596 9 GVRLAYREAGGG-GPPLVLLHGFPGSSSVWRPVFKVLPALAAR-YRVIAPDLRGHGRSD-PA---GYSLSAYADDLAALL 82 (282)
T ss_pred CeEEEEeecCCC-CCeEEEeCCCCCchhhhHHHHHHhhccccc-eEEEEecccCCCCCC-cc---cccHHHHHHHHHHHH
Confidence 346677776654 6689999998776554333 1112123 999999999999997 11 234455599999999
Q ss_pred HHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHH
Q 020067 108 QHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVD 187 (331)
Q Consensus 108 ~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (331)
+.++..+++++|||+||.+++.++.++|++++++|++++.............. ..........................
T Consensus 83 ~~~~~~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (282)
T COG0596 83 DALGLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQP-AGAAPLAALADLLLGLDAAAFAALLA 161 (282)
T ss_pred HHhCCCceEEEEecccHHHHHHHHHhcchhhheeeEecCCCCcccccCccccC-ccccchhhhhhhhhccchhhhhhhhh
Confidence 99998899999999999999999999999999999999765411000000000 00000000000000000000000000
Q ss_pred hh--ccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhh--hhhhccCCCCCcchhhhhccc
Q 020067 188 AY--SKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIEN--HYFLNKGFFPSDSFLLDNIDN 263 (331)
Q Consensus 188 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~ 263 (331)
.. ......... ........ ................ ......... .......+..
T Consensus 162 ~~~~~~~~~~~~~----------------~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 219 (282)
T COG0596 162 ALGLLAALAAAAR----------------AGLAEALR----APLLGAAAAAFARAARADLAAALLALL--DRDLRAALAR 219 (282)
T ss_pred cccccccccccch----------------hccccccc----cccchhHhhhhhhhcccccchhhhccc--ccccchhhcc
Confidence 00 000000000 00000000 0000000000000000 000000000 0023345667
Q ss_pred cccccEEEEecCCCCccCCcchHHHHHhCCC-CcEEEecCCCCCCCcCCchhHHHHHHHHHHH
Q 020067 264 IRHINATIVQGRYDVCCPMMSAWDLHKAWPE-ADFKVVADAGHSANEPGIAAELVATNEKLKN 325 (331)
Q Consensus 264 i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~ 325 (331)
+ ++|+++++|++|.+.|......+.+.+++ .++++++++||+.+.++ ++.+.+.+.+|++
T Consensus 220 ~-~~P~l~i~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~-p~~~~~~i~~~~~ 280 (282)
T COG0596 220 I-TVPTLIIHGEDDPVVPAELARRLAAALPNDARLVVIPGAGHFPHLEA-PEAFAAALLAFLE 280 (282)
T ss_pred C-CCCeEEEecCCCCcCCHHHHHHHHhhCCCCceEEEeCCCCCcchhhc-HHHHHHHHHHHHh
Confidence 7 59999999999977766556777777885 89999999999999997 8899888888543
No 63
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.86 E-value=1e-19 Score=140.81 Aligned_cols=287 Identities=17% Similarity=0.159 Sum_probs=164.0
Q ss_pred ceEEEEeCCCCC---CCcEEEeccCCCCCC-----------CCCc----ccccCCCCcEEEEecCCCCC-CCCCCC----
Q 020067 33 HTIYWEQSGNPT---GHPVVFLHGGPGGGT-----------TPSN----RRFFDPDFYRIILFDQRGAG-KSTPHA---- 89 (331)
Q Consensus 33 ~~l~~~~~g~~~---~~~vl~~HG~~~~~~-----------~~~~----~~~~~~~g~~vi~~D~~G~G-~s~~~~---- 89 (331)
..+.|.++|..+ ..+||++|+..++.. ||.. -..+....|.||+.|-.|.+ .|..+.
T Consensus 36 ~~vay~T~Gtln~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~p 115 (368)
T COG2021 36 ARVAYETYGTLNAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSINP 115 (368)
T ss_pred cEEEEEecccccccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcCC
Confidence 378999999644 357999999766432 2221 12233467999999999865 333222
Q ss_pred -------CCCccchHHHHHHHHHHHHHhCCCcEE-EEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcc
Q 020067 90 -------CLDQNTTWDLIDDIEKLRQHLEIPEWQ-VFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGG 161 (331)
Q Consensus 90 -------~~~~~~~~~~~~~~~~~~~~~~~~~v~-lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~ 161 (331)
....+++.|++..-..+++++|++++. +||-||||+.++.++..+|++|+.+|.+++..........+....
T Consensus 116 ~g~~yg~~FP~~ti~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s~~~ia~~~~~ 195 (368)
T COG2021 116 GGKPYGSDFPVITIRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLSAQNIAFNEVQ 195 (368)
T ss_pred CCCccccCCCcccHHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChHHHhhhheecccccCCHHHHHHHHHH
Confidence 113468889999889999999999987 899999999999999999999999999998766443221111110
Q ss_pred c-ccCChhhHHh--hhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhh----h----HHHhhhcC-CCChhhhhcCC
Q 020067 162 A-AAIYPDAWES--FRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWT----K----WEMMTAHL-LPNEENIKRGE 229 (331)
Q Consensus 162 ~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~----~~~~~~~~-~~~~~~~~~~~ 229 (331)
. .......|.. +.....+.......+.+................+... . .....+++ .........++
T Consensus 196 r~AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~~~~~~~~~f~vESYL~~qg~kf~~rfD 275 (368)
T COG2021 196 RQAIEADPDWNGGDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQADPLRGGGVRFAVESYLDYQGDKFVARFD 275 (368)
T ss_pred HHHHHhCCCccCCCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhcccccccccCCCchhHHHHHHHHHHHHHHHhccC
Confidence 0 0000111110 0000000001111111111111110000000000000 0 00000000 01111222222
Q ss_pred ccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCCCCc-EEEe-cCCCCCC
Q 020067 230 DDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEAD-FKVV-ADAGHSA 307 (331)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~-~~~~-~~~gH~~ 307 (331)
...+......++.. .......++.+.|++++ +|+|++.-+.|...|++..+.+.+.++.+. ++++ ...||..
T Consensus 276 aNsYL~lt~ald~~-----D~s~~~~~l~~al~~i~-~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~~~~i~S~~GHDa 349 (368)
T COG2021 276 ANSYLYLTRALDYH-----DVSRGRGDLTAALARIK-APVLVVGITSDWLFPPELQRALAEALPAAGALREIDSPYGHDA 349 (368)
T ss_pred cchHHHHHHHHHhc-----CCCCCcCcHHHHHhcCc-cCEEEEEecccccCCHHHHHHHHHhccccCceEEecCCCCchh
Confidence 22222222222111 11111345667799995 999999999999999999999999998766 7666 4569988
Q ss_pred CcCCchhHHHHHHHHHHHh
Q 020067 308 NEPGIAAELVATNEKLKNL 326 (331)
Q Consensus 308 ~~~~~~~~~~~~i~~fl~~ 326 (331)
++.+ .+.+...|..||+.
T Consensus 350 FL~e-~~~~~~~i~~fL~~ 367 (368)
T COG2021 350 FLVE-SEAVGPLIRKFLAL 367 (368)
T ss_pred hhcc-hhhhhHHHHHHhhc
Confidence 7775 77788999999875
No 64
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.86 E-value=6.8e-22 Score=141.27 Aligned_cols=143 Identities=22% Similarity=0.326 Sum_probs=109.4
Q ss_pred cEEEeccCCCCC-CCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCcEEEEEeChhHH
Q 020067 47 PVVFLHGGPGGG-TTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGST 125 (331)
Q Consensus 47 ~vl~~HG~~~~~-~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~ 125 (331)
+||++||++++. .+......+.++||.|+.+|+|++|.+... ...+++.+++. .+..+.++++++|||+||.
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~-----~~~~~~~~~~~--~~~~~~~~i~l~G~S~Gg~ 73 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALAEQGYAVVAFDYPGHGDSDGA-----DAVERVLADIR--AGYPDPDRIILIGHSMGGA 73 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHHHTTEEEEEESCTTSTTSHHS-----HHHHHHHHHHH--HHHCTCCEEEEEEETHHHH
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEecCCCCccchh-----HHHHHHHHHHH--hhcCCCCcEEEEEEccCcH
Confidence 589999976653 345667777789999999999999988322 23333444333 1223668999999999999
Q ss_pred HHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhccccCCCchHHHHHHH
Q 020067 126 LALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAA 205 (331)
Q Consensus 126 ~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (331)
+++.++.+. .+++++|++++...
T Consensus 74 ~a~~~~~~~-~~v~~~v~~~~~~~-------------------------------------------------------- 96 (145)
T PF12695_consen 74 IAANLAARN-PRVKAVVLLSPYPD-------------------------------------------------------- 96 (145)
T ss_dssp HHHHHHHHS-TTESEEEEESESSG--------------------------------------------------------
T ss_pred HHHHHhhhc-cceeEEEEecCccc--------------------------------------------------------
Confidence 999999998 68999999997211
Q ss_pred HHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCCCccCCcch
Q 020067 206 RAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSA 285 (331)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~ 285 (331)
.+.+.+. ++|+++++|++|..++++..
T Consensus 97 ----------------------------------------------------~~~~~~~-~~pv~~i~g~~D~~~~~~~~ 123 (145)
T PF12695_consen 97 ----------------------------------------------------SEDLAKI-RIPVLFIHGENDPLVPPEQV 123 (145)
T ss_dssp ----------------------------------------------------CHHHTTT-TSEEEEEEETT-SSSHHHHH
T ss_pred ----------------------------------------------------hhhhhcc-CCcEEEEEECCCCcCCHHHH
Confidence 1123345 59999999999999999999
Q ss_pred HHHHHhCC-CCcEEEecCCCCC
Q 020067 286 WDLHKAWP-EADFKVVADAGHS 306 (331)
Q Consensus 286 ~~~~~~~~-~~~~~~~~~~gH~ 306 (331)
+++.+.++ +.+++++++++|+
T Consensus 124 ~~~~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 124 RRLYEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp HHHHHHHCSSEEEEEETTS-TT
T ss_pred HHHHHHcCCCcEEEEeCCCcCc
Confidence 99988886 5899999999996
No 65
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.85 E-value=2.3e-21 Score=142.63 Aligned_cols=103 Identities=21% Similarity=0.325 Sum_probs=82.0
Q ss_pred CCCCcEEEeccCCCCCCCCC-cccccCC-CCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhC---CCcEEE
Q 020067 43 PTGHPVVFLHGGPGGGTTPS-NRRFFDP-DFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLE---IPEWQV 117 (331)
Q Consensus 43 ~~~~~vl~~HG~~~~~~~~~-~~~~~~~-~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~v~l 117 (331)
+.+|.++++||++.+...|. ++..+.. ...+|+++|+||||++..... .+.+.+.++.|+-++++.+- ..+|+|
T Consensus 72 t~gpil~l~HG~G~S~LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e-~dlS~eT~~KD~~~~i~~~fge~~~~iil 150 (343)
T KOG2564|consen 72 TEGPILLLLHGGGSSALSFAIFASELKSKIRCRCLALDLRGHGETKVENE-DDLSLETMSKDFGAVIKELFGELPPQIIL 150 (343)
T ss_pred CCccEEEEeecCcccchhHHHHHHHHHhhcceeEEEeeccccCccccCCh-hhcCHHHHHHHHHHHHHHHhccCCCceEE
Confidence 46888999999888766544 4444433 567899999999999985543 46899999999999998873 458999
Q ss_pred EEeChhHHHHHHHHHhC--CCceeeEEEeccc
Q 020067 118 FGGSWGSTLALAYSLAH--PDKVTGLVLRGIF 147 (331)
Q Consensus 118 vG~S~Gg~~a~~~a~~~--p~~v~~li~~~~~ 147 (331)
|||||||.++.+.|... |. +.|++.++-.
T Consensus 151 VGHSmGGaIav~~a~~k~lps-l~Gl~viDVV 181 (343)
T KOG2564|consen 151 VGHSMGGAIAVHTAASKTLPS-LAGLVVIDVV 181 (343)
T ss_pred Eeccccchhhhhhhhhhhchh-hhceEEEEEe
Confidence 99999999999887754 65 8999998864
No 66
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.85 E-value=1.2e-19 Score=143.29 Aligned_cols=279 Identities=18% Similarity=0.158 Sum_probs=155.0
Q ss_pred CCCCCCccceeEeCCCceEEEEeC--CC-------CCCCcEEEeccCCCCCC---CCCcccccCCCCcEEEEecCCCCCC
Q 020067 17 PYVEPYSTGILKVSDIHTIYWEQS--GN-------PTGHPVVFLHGGPGGGT---TPSNRRFFDPDFYRIILFDQRGAGK 84 (331)
Q Consensus 17 ~~~~~~~~~~~~~~~g~~l~~~~~--g~-------~~~~~vl~~HG~~~~~~---~~~~~~~~~~~g~~vi~~D~~G~G~ 84 (331)
.+...+++..++++||.++.+... +. .+.|.||++||..+++. ...++....++||+|++++.||+|.
T Consensus 88 ~p~~~y~Reii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g 167 (409)
T KOG1838|consen 88 KPPVEYTREIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGG 167 (409)
T ss_pred CCCCcceeEEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCC
Confidence 345677888999999988876533 11 24588999999655433 2556667778999999999999999
Q ss_pred CCCCC--CCCccchHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCC---ceeeEEEeccccchhhhhhhHhh
Q 020067 85 STPHA--CLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPD---KVTGLVLRGIFLLRKKEIDWFYE 159 (331)
Q Consensus 85 s~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~---~v~~li~~~~~~~~~~~~~~~~~ 159 (331)
|.-.. -+.....+|+.+.+..+.+.....+...+|.||||.+.+.+..+..+ .+.++++++|...... .+...
T Consensus 168 ~~LtTpr~f~ag~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~~~--~~~~~ 245 (409)
T KOG1838|consen 168 SKLTTPRLFTAGWTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLLAA--SRSIE 245 (409)
T ss_pred CccCCCceeecCCHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhhhh--hhHHh
Confidence 87443 11223455666666666666667799999999999999999987644 3455555555432100 00000
Q ss_pred cccccCChhhHHhhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhh
Q 020067 160 GGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFAR 239 (331)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (331)
.......+.... . ......+......+..+.. .-....+......+-..+..
T Consensus 246 ---~~~~~~~y~~~l---~-~~l~~~~~~~r~~~~~~~v---------------------d~d~~~~~~SvreFD~~~t~ 297 (409)
T KOG1838|consen 246 ---TPLYRRFYNRAL---T-LNLKRIVLRHRHTLFEDPV---------------------DFDVILKSRSVREFDEALTR 297 (409)
T ss_pred ---cccchHHHHHHH---H-HhHHHHHhhhhhhhhhccc---------------------hhhhhhhcCcHHHHHhhhhh
Confidence 000000000000 0 0000011111110000000 00000000000011111111
Q ss_pred hhhhhhhccCCCCCcchhhhhccccccccEEEEecCCCCccCCcc-hHHHHHhCCCCcEEEecCCCCCCCcCC---chhH
Q 020067 240 IENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMS-AWDLHKAWPEADFKVVADAGHSANEPG---IAAE 315 (331)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~gH~~~~~~---~~~~ 315 (331)
....+-....++. .......+.+|+ +|+|+|++.+|+++|+.. -.......|++-+++-..+||..+.+. ....
T Consensus 298 ~~~gf~~~deYY~-~aSs~~~v~~I~-VP~L~ina~DDPv~p~~~ip~~~~~~np~v~l~~T~~GGHlgfleg~~p~~~~ 375 (409)
T KOG1838|consen 298 PMFGFKSVDEYYK-KASSSNYVDKIK-VPLLCINAADDPVVPEEAIPIDDIKSNPNVLLVITSHGGHLGFLEGLWPSART 375 (409)
T ss_pred hhcCCCcHHHHHh-hcchhhhccccc-ccEEEEecCCCCCCCcccCCHHHHhcCCcEEEEEeCCCceeeeeccCCCccch
Confidence 1100000000111 344556899995 999999999999999853 334455568888888899999987765 3555
Q ss_pred HHHH-HHHHHHhh
Q 020067 316 LVAT-NEKLKNLI 327 (331)
Q Consensus 316 ~~~~-i~~fl~~~ 327 (331)
+++. +.+|+...
T Consensus 376 w~~~~l~ef~~~~ 388 (409)
T KOG1838|consen 376 WMDKLLVEFLGNA 388 (409)
T ss_pred hHHHHHHHHHHHH
Confidence 6666 77777654
No 67
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.85 E-value=8e-20 Score=138.99 Aligned_cols=279 Identities=16% Similarity=0.103 Sum_probs=144.6
Q ss_pred CCCccceeEeCCCceEEE-EeC-C-CCCCCcEEEeccCCCCCCC---CCcccccCCCCcEEEEecCCCCCCCCCCC--CC
Q 020067 20 EPYSTGILKVSDIHTIYW-EQS-G-NPTGHPVVFLHGGPGGGTT---PSNRRFFDPDFYRIILFDQRGAGKSTPHA--CL 91 (331)
Q Consensus 20 ~~~~~~~~~~~~g~~l~~-~~~-g-~~~~~~vl~~HG~~~~~~~---~~~~~~~~~~g~~vi~~D~~G~G~s~~~~--~~ 91 (331)
...+...+.++||-.+-. +.. + ....|.||++||..|+... ..+...+.++||.|+++++|||+.+.... -+
T Consensus 47 ~~~~re~v~~pdg~~~~ldw~~~p~~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~~y 126 (345)
T COG0429 47 VAYTRERLETPDGGFIDLDWSEDPRAAKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSPRLY 126 (345)
T ss_pred cccceEEEEcCCCCEEEEeeccCccccCCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCccee
Confidence 345566788887754433 222 2 2345789999996555333 44666677899999999999999987532 11
Q ss_pred CccchHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCC--ceeeEEEeccccchhhhhhhHhhcccc-cCChh
Q 020067 92 DQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPD--KVTGLVLRGIFLLRKKEIDWFYEGGAA-AIYPD 168 (331)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~--~v~~li~~~~~~~~~~~~~~~~~~~~~-~~~~~ 168 (331)
.....+|++.-+..+.......++..||.|+||.+...+.....+ .+.+.+.++.+.........+ ..+.. .++..
T Consensus 127 h~G~t~D~~~~l~~l~~~~~~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~~~~~~l-~~~~s~~ly~r 205 (345)
T COG0429 127 HSGETEDIRFFLDWLKARFPPRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLEACAYRL-DSGFSLRLYSR 205 (345)
T ss_pred cccchhHHHHHHHHHHHhCCCCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHHHHHHHHh-cCchhhhhhHH
Confidence 122223333333333334456799999999999554444444322 355555555544332111111 11111 11111
Q ss_pred hHHhhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhcc
Q 020067 169 AWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNK 248 (331)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (331)
.+.+.. ...+..-...+...-+.......+.......+........-.+ ... ..||.
T Consensus 206 ~l~~~L--------~~~~~~kl~~l~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf------------~da-~dYYr-- 262 (345)
T COG0429 206 YLLRNL--------KRNAARKLKELEPSLPGTVLAAIKRCRTIREFDDLLTAPLHGF------------ADA-EDYYR-- 262 (345)
T ss_pred HHHHHH--------HHHHHHHHHhcCcccCcHHHHHHHhhchHHhccceeeecccCC------------CcH-HHHHH--
Confidence 111000 0001110111100101110111111111111111000000000 000 00111
Q ss_pred CCCCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHH-hCCCCcEEEecCCCCCCCcCC---chh-HHHHHHHHH
Q 020067 249 GFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHK-AWPEADFKVVADAGHSANEPG---IAA-ELVATNEKL 323 (331)
Q Consensus 249 ~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~-~~~~~~~~~~~~~gH~~~~~~---~~~-~~~~~i~~f 323 (331)
.......|.+|+ +|+|||++.+|++++++....... ..|++.+.+.+.+||..+... .+. ...+.+.+|
T Consensus 263 -----~aSs~~~L~~Ir-~PtLii~A~DDP~~~~~~iP~~~~~~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~ 336 (345)
T COG0429 263 -----QASSLPLLPKIR-KPTLIINAKDDPFMPPEVIPKLQEMLNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDW 336 (345)
T ss_pred -----hccccccccccc-cceEEEecCCCCCCChhhCCcchhcCCCceEEEeecCCceEEeccCccccchhhHHHHHHHH
Confidence 233455889995 999999999999999987777776 568899999999999876542 132 566777778
Q ss_pred HHhhh
Q 020067 324 KNLIK 328 (331)
Q Consensus 324 l~~~~ 328 (331)
++...
T Consensus 337 l~~~~ 341 (345)
T COG0429 337 LDPFL 341 (345)
T ss_pred HHHHH
Confidence 77653
No 68
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.84 E-value=3.7e-19 Score=154.66 Aligned_cols=234 Identities=18% Similarity=0.138 Sum_probs=152.0
Q ss_pred CCccceeEeCCCceEEEEeCCCCC------CCcEEEeccCCCCCC---CCCcccccCCCCcEEEEecCCCCCC---CCCC
Q 020067 21 PYSTGILKVSDIHTIYWEQSGNPT------GHPVVFLHGGPGGGT---TPSNRRFFDPDFYRIILFDQRGAGK---STPH 88 (331)
Q Consensus 21 ~~~~~~~~~~~g~~l~~~~~g~~~------~~~vl~~HG~~~~~~---~~~~~~~~~~~g~~vi~~D~~G~G~---s~~~ 88 (331)
..+...+...||.+++.+...+++ -|+||++||++.+.. +......++.+||.|+.+++||.+. .-..
T Consensus 364 ~~e~~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~~ 443 (620)
T COG1506 364 EPEPVTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGREFAD 443 (620)
T ss_pred CceEEEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHHHHH
Confidence 445667788899899877664321 168999999975422 3556677778999999999997433 2111
Q ss_pred ---CCCCccchHHHHHHHHHHHHHhC---CCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhccc
Q 020067 89 ---ACLDQNTTWDLIDDIEKLRQHLE---IPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGA 162 (331)
Q Consensus 89 ---~~~~~~~~~~~~~~~~~~~~~~~---~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~ 162 (331)
........+|+.+.+. ++...+ .++++++|||+||.+++.++.+.| ++++.+...+.......
T Consensus 444 ~~~~~~g~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~~~~~--------- 512 (620)
T COG1506 444 AIRGDWGGVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVDWLLY--------- 512 (620)
T ss_pred hhhhccCCccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcchhhhh---------
Confidence 1223346677777776 444443 348999999999999999999988 67777766664432110
Q ss_pred ccCChhhHHhhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhh
Q 020067 163 AAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIEN 242 (331)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (331)
......... ........ .. ..+.+.+.
T Consensus 513 -----------~~~~~~~~~-~~~~~~~~---~~----------------------~~~~~~~~---------------- 539 (620)
T COG1506 513 -----------FGESTEGLR-FDPEENGG---GP----------------------PEDREKYE---------------- 539 (620)
T ss_pred -----------ccccchhhc-CCHHHhCC---Cc----------------------ccChHHHH----------------
Confidence 000000000 00000000 00 00000000
Q ss_pred hhhhccCCCCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhC----CCCcEEEecCCCCCCCcCCchhHHHH
Q 020067 243 HYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAW----PEADFKVVADAGHSANEPGIAAELVA 318 (331)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~~~~~~~~~~ 318 (331)
.........++ ++|+|+|||++|..||.+.+.++.+.+ .+++++++|+.||.+...+....+.+
T Consensus 540 -----------~~sp~~~~~~i-~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~~~~~~~~~ 607 (620)
T COG1506 540 -----------DRSPIFYADNI-KTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRPENRVKVLK 607 (620)
T ss_pred -----------hcChhhhhccc-CCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCchhHHHHHH
Confidence 12233467788 599999999999999999999888877 35789999999999977555888899
Q ss_pred HHHHHHHhhhcC
Q 020067 319 TNEKLKNLIKNG 330 (331)
Q Consensus 319 ~i~~fl~~~~~~ 330 (331)
.+.+|+++..+.
T Consensus 608 ~~~~~~~~~~~~ 619 (620)
T COG1506 608 EILDWFKRHLKQ 619 (620)
T ss_pred HHHHHHHHHhcC
Confidence 999999876543
No 69
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.83 E-value=3.2e-20 Score=131.30 Aligned_cols=205 Identities=17% Similarity=0.188 Sum_probs=130.9
Q ss_pred CCCcEEEeccCCCCCCC---CCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCC-c--EEE
Q 020067 44 TGHPVVFLHGGPGGGTT---PSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIP-E--WQV 117 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~~---~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--v~l 117 (331)
+...+|++||+-++... ...+..+.+.|+.++.+|++|.|+|.....+..+ ...++|+..++.++... + -++
T Consensus 32 s~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~Gn~--~~eadDL~sV~q~~s~~nr~v~vi 109 (269)
T KOG4667|consen 32 STEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYYGNY--NTEADDLHSVIQYFSNSNRVVPVI 109 (269)
T ss_pred CceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccccCcc--cchHHHHHHHHHHhccCceEEEEE
Confidence 56789999998665332 4466677789999999999999999987654433 44569999999998643 3 348
Q ss_pred EEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhccccCCCc
Q 020067 118 FGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDD 197 (331)
Q Consensus 118 vG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (331)
+|||-||.+++.+|.++++ ++-+|.+++-........ ..+.+. .+......-.-+.
T Consensus 110 ~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl~~~I~-------------------eRlg~~----~l~~ike~Gfid~ 165 (269)
T KOG4667|consen 110 LGHSKGGDVVLLYASKYHD-IRNVINCSGRYDLKNGIN-------------------ERLGED----YLERIKEQGFIDV 165 (269)
T ss_pred EeecCccHHHHHHHHhhcC-chheEEcccccchhcchh-------------------hhhccc----HHHHHHhCCceec
Confidence 9999999999999999987 777888776544322110 000000 0111100000000
Q ss_pred hHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccc-cccEEEEecCC
Q 020067 198 KETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIR-HINATIVQGRY 276 (331)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~-~~P~l~i~G~~ 276 (331)
... ......+ ..++.+.. ++ ..+..+...+|. +||||-+||..
T Consensus 166 ~~r-----------kG~y~~r-vt~eSlmd-----------rL-------------ntd~h~aclkId~~C~VLTvhGs~ 209 (269)
T KOG4667|consen 166 GPR-----------KGKYGYR-VTEESLMD-----------RL-------------NTDIHEACLKIDKQCRVLTVHGSE 209 (269)
T ss_pred Ccc-----------cCCcCce-ecHHHHHH-----------HH-------------hchhhhhhcCcCccCceEEEeccC
Confidence 000 0000000 00000000 00 122222333332 69999999999
Q ss_pred CCccCCcchHHHHHhCCCCcEEEecCCCCCCCcC
Q 020067 277 DVCCPMMSAWDLHKAWPEADFKVVADAGHSANEP 310 (331)
Q Consensus 277 D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 310 (331)
|.+||.+.+.++++.+|+-++.++||+.|.....
T Consensus 210 D~IVPve~AkefAk~i~nH~L~iIEgADHnyt~~ 243 (269)
T KOG4667|consen 210 DEIVPVEDAKEFAKIIPNHKLEIIEGADHNYTGH 243 (269)
T ss_pred CceeechhHHHHHHhccCCceEEecCCCcCccch
Confidence 9999999999999999999999999999998654
No 70
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.83 E-value=1.1e-19 Score=138.24 Aligned_cols=193 Identities=18% Similarity=0.192 Sum_probs=119.6
Q ss_pred cccccCCCCcEEEEecCCCCCCCCC------CCCCCccchHHHHHHHHHHHHHh--CCCcEEEEEeChhHHHHHHHHHhC
Q 020067 63 NRRFFDPDFYRIILFDQRGAGKSTP------HACLDQNTTWDLIDDIEKLRQHL--EIPEWQVFGGSWGSTLALAYSLAH 134 (331)
Q Consensus 63 ~~~~~~~~g~~vi~~D~~G~G~s~~------~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~lvG~S~Gg~~a~~~a~~~ 134 (331)
....++++||.|+.+|+||.+.... .........+|..+.+..+++.. +.+++.++|+|+||.+++.++.++
T Consensus 6 ~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~~~ 85 (213)
T PF00326_consen 6 NAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAATQH 85 (213)
T ss_dssp HHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHHHT
T ss_pred HHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhhccc
Confidence 3445668999999999999774321 11112234455555555555543 346899999999999999999999
Q ss_pred CCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHh
Q 020067 135 PDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMM 214 (331)
Q Consensus 135 p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (331)
|+++++++..++.......... ... +...........
T Consensus 86 ~~~f~a~v~~~g~~d~~~~~~~--------------------~~~-----~~~~~~~~~~~~------------------ 122 (213)
T PF00326_consen 86 PDRFKAAVAGAGVSDLFSYYGT--------------------TDI-----YTKAEYLEYGDP------------------ 122 (213)
T ss_dssp CCGSSEEEEESE-SSTTCSBHH--------------------TCC-----HHHGHHHHHSST------------------
T ss_pred ceeeeeeeccceecchhccccc--------------------ccc-----cccccccccCcc------------------
Confidence 9999999999886543211000 000 000000000000
Q ss_pred hhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccc--cccccEEEEecCCCCccCCcchHHHHHhC
Q 020067 215 TAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDN--IRHINATIVQGRYDVCCPMMSAWDLHKAW 292 (331)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--i~~~P~l~i~G~~D~~~~~~~~~~~~~~~ 292 (331)
...++... .......+.+ + ++|+|++||++|..||++.+.++.+.+
T Consensus 123 ----~~~~~~~~---------------------------~~s~~~~~~~~~~-~~P~li~hG~~D~~Vp~~~s~~~~~~L 170 (213)
T PF00326_consen 123 ----WDNPEFYR---------------------------ELSPISPADNVQI-KPPVLIIHGENDPRVPPSQSLRLYNAL 170 (213)
T ss_dssp ----TTSHHHHH---------------------------HHHHGGGGGGCGG-GSEEEEEEETTBSSSTTHHHHHHHHHH
T ss_pred ----chhhhhhh---------------------------hhccccccccccC-CCCEEEEccCCCCccCHHHHHHHHHHH
Confidence 00000000 0011123333 6 599999999999999999998888776
Q ss_pred ----CCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhhhcC
Q 020067 293 ----PEADFKVVADAGHSANEPGIAAELVATNEKLKNLIKNG 330 (331)
Q Consensus 293 ----~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~~~ 330 (331)
.+++++++|++||.+.......++.+.+.+|+++..++
T Consensus 171 ~~~g~~~~~~~~p~~gH~~~~~~~~~~~~~~~~~f~~~~l~~ 212 (213)
T PF00326_consen 171 RKAGKPVELLIFPGEGHGFGNPENRRDWYERILDFFDKYLKK 212 (213)
T ss_dssp HHTTSSEEEEEETT-SSSTTSHHHHHHHHHHHHHHHHHHTT-
T ss_pred HhcCCCEEEEEcCcCCCCCCCchhHHHHHHHHHHHHHHHcCC
Confidence 35889999999997765544778999999999987654
No 71
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.82 E-value=2.1e-19 Score=138.23 Aligned_cols=125 Identities=17% Similarity=0.107 Sum_probs=91.4
Q ss_pred ceeEeCCCceEEEEeCC--CCCCCcEEEeccCCCCCC-C----CCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchH
Q 020067 25 GILKVSDIHTIYWEQSG--NPTGHPVVFLHGGPGGGT-T----PSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTW 97 (331)
Q Consensus 25 ~~~~~~~g~~l~~~~~g--~~~~~~vl~~HG~~~~~~-~----~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~ 97 (331)
.+++...|....+.... ....++||++||+++... + ...+..+.+.||+|+++|+||||.|.... ...+++
T Consensus 3 ~~l~~~~g~~~~~~~~p~~~~~~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~--~~~~~~ 80 (266)
T TIGR03101 3 FFLDAPHGFRFCLYHPPVAVGPRGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDF--AAARWD 80 (266)
T ss_pred EEecCCCCcEEEEEecCCCCCCceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCcc--ccCCHH
Confidence 35666677433322222 222467999999765322 2 22456676789999999999999997554 235677
Q ss_pred HHHHHHHHHHH---HhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchh
Q 020067 98 DLIDDIEKLRQ---HLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRK 151 (331)
Q Consensus 98 ~~~~~~~~~~~---~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~ 151 (331)
.+++|+..+++ ..+.++++++||||||.+++.+|.++|++++++|+++|.....
T Consensus 81 ~~~~Dv~~ai~~L~~~~~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~g~ 137 (266)
T TIGR03101 81 VWKEDVAAAYRWLIEQGHPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVVSGK 137 (266)
T ss_pred HHHHHHHHHHHHHHhcCCCCEEEEEECHHHHHHHHHHHhCccccceEEEeccccchH
Confidence 88888777554 4466799999999999999999999999999999999876543
No 72
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.82 E-value=1.9e-19 Score=136.04 Aligned_cols=267 Identities=13% Similarity=0.146 Sum_probs=146.5
Q ss_pred cceeEeCCCceEEEEeCCCCC--CCcEEEeccCC-CCCC-CCCccc----ccCCCCcEEEEecCCCCCCCC--CCCCCCc
Q 020067 24 TGILKVSDIHTIYWEQSGNPT--GHPVVFLHGGP-GGGT-TPSNRR----FFDPDFYRIILFDQRGAGKST--PHACLDQ 93 (331)
Q Consensus 24 ~~~~~~~~g~~l~~~~~g~~~--~~~vl~~HG~~-~~~~-~~~~~~----~~~~~g~~vi~~D~~G~G~s~--~~~~~~~ 93 (331)
++.++++-| .+++...|+++ +|++|-.|-.+ +... +..+.. ..+.+.|.|+-+|.||+..-. -+.++..
T Consensus 1 eh~v~t~~G-~v~V~v~G~~~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~~f~i~Hi~aPGqe~ga~~~p~~y~y 79 (283)
T PF03096_consen 1 EHDVETPYG-SVHVTVQGDPKGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQNFCIYHIDAPGQEEGAATLPEGYQY 79 (283)
T ss_dssp -EEEEETTE-EEEEEEESS--TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHTTSEEEEEE-TTTSTT-----TT---
T ss_pred CceeccCce-EEEEEEEecCCCCCceEEEeccccccchHHHHHHhcchhHHHHhhceEEEEEeCCCCCCCcccccccccc
Confidence 356888888 99999999866 89999999944 3322 222111 122478999999999986543 3444445
Q ss_pred cchHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhh
Q 020067 94 NTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESF 173 (331)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (331)
.+++++++++..++++++++.++-+|...||.+..++|..+|++|.|+|++++.........|+..+-....+.
T Consensus 80 Psmd~LAe~l~~Vl~~f~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~gw~Ew~~~K~~~~~L~------ 153 (283)
T PF03096_consen 80 PSMDQLAEMLPEVLDHFGLKSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAGWMEWFYQKLSSWLLY------ 153 (283)
T ss_dssp --HHHHHCTHHHHHHHHT---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S---HHHHHHHHHH-----------
T ss_pred cCHHHHHHHHHHHHHhCCccEEEEEeeccchhhhhhccccCccceeEEEEEecCCCCccHHHHHHHHHhccccc------
Confidence 78999999999999999999999999999999999999999999999999999888777766665432111000
Q ss_pred hccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCC
Q 020067 174 RDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPS 253 (331)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (331)
...........++..++..-.... .....+.+... .. ...++..+.. +...+ ..
T Consensus 154 ~~gmt~~~~d~Ll~h~Fg~~~~~~---n~Dlv~~yr~~---l~-~~~Np~Nl~~-----f~~sy--------------~~ 207 (283)
T PF03096_consen 154 SYGMTSSVKDYLLWHYFGKEEEEN---NSDLVQTYRQH---LD-ERINPKNLAL-----FLNSY--------------NS 207 (283)
T ss_dssp --CTTS-HHHHHHHHHS-HHHHHC---T-HHHHHHHHH---HH-T-TTHHHHHH-----HHHHH--------------HT
T ss_pred ccccccchHHhhhhcccccccccc---cHHHHHHHHHH---Hh-cCCCHHHHHH-----HHHHH--------------hc
Confidence 001111111111111111100000 00000000000 00 0000000000 00000 00
Q ss_pred cchhhhhccccccccEEEEecCCCCccCCcchHHHHHhC-C-CCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhh
Q 020067 254 DSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAW-P-EADFKVVADAGHSANEPGIAAELVATNEKLKNLI 327 (331)
Q Consensus 254 ~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~-~-~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 327 (331)
..++...+... .||+|++.|++.+.. +.+.++..++ | +.++..+++||=.+..|+ |..+++.+.-|++-+
T Consensus 208 R~DL~~~~~~~-~c~vLlvvG~~Sp~~--~~vv~~ns~Ldp~~ttllkv~dcGglV~eEq-P~klaea~~lFlQG~ 279 (283)
T PF03096_consen 208 RTDLSIERPSL-GCPVLLVVGDNSPHV--DDVVEMNSKLDPTKTTLLKVADCGGLVLEEQ-PGKLAEAFKLFLQGM 279 (283)
T ss_dssp -----SECTTC-CS-EEEEEETTSTTH--HHHHHHHHHS-CCCEEEEEETT-TT-HHHH--HHHHHHHHHHHHHHT
T ss_pred cccchhhcCCC-CCCeEEEEecCCcch--hhHHHHHhhcCcccceEEEecccCCcccccC-cHHHHHHHHHHHccC
Confidence 34555566777 599999999999886 4556777777 3 578899999999999997 999999999999753
No 73
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.82 E-value=8.2e-18 Score=125.16 Aligned_cols=272 Identities=13% Similarity=0.118 Sum_probs=168.0
Q ss_pred CCccceeEeCCCceEEEEeCCCCC--CCcEEEecc-CCCCCC-C-----CCcccccCCCCcEEEEecCCCCCCCC--CCC
Q 020067 21 PYSTGILKVSDIHTIYWEQSGNPT--GHPVVFLHG-GPGGGT-T-----PSNRRFFDPDFYRIILFDQRGAGKST--PHA 89 (331)
Q Consensus 21 ~~~~~~~~~~~g~~l~~~~~g~~~--~~~vl~~HG-~~~~~~-~-----~~~~~~~~~~g~~vi~~D~~G~G~s~--~~~ 89 (331)
..+++.|++.-| .+++...|+++ +|++|-.|. +.+... + ......++ ..|.|+-+|.||+-.-. -+.
T Consensus 21 ~~~e~~V~T~~G-~v~V~V~Gd~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~-~~fcv~HV~~PGqe~gAp~~p~ 98 (326)
T KOG2931|consen 21 TCQEHDVETAHG-VVHVTVYGDPKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEIL-EHFCVYHVDAPGQEDGAPSFPE 98 (326)
T ss_pred cceeeeeccccc-cEEEEEecCCCCCCceEEEecccccchHhHhHHhhcCHhHHHHH-hheEEEecCCCccccCCccCCC
Confidence 367889999988 89999999766 788999999 444433 2 12223333 44999999999985443 344
Q ss_pred CCCccchHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhh
Q 020067 90 CLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDA 169 (331)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (331)
++...+.+++++++..++++++.+.|+-+|...|+.+..++|..||++|.|+|++++.+.......|....-...+
T Consensus 99 ~y~yPsmd~LAd~l~~VL~~f~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~gwiew~~~K~~s~~---- 174 (326)
T KOG2931|consen 99 GYPYPSMDDLADMLPEVLDHFGLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCAKGWIEWAYNKVSSNL---- 174 (326)
T ss_pred CCCCCCHHHHHHHHHHHHHhcCcceEEEecccccHHHHHHHHhcChhheeEEEEEecCCCCchHHHHHHHHHHHHH----
Confidence 4445789999999999999999999999999999999999999999999999999998887777777654311100
Q ss_pred HHhhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccC
Q 020067 170 WESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKG 249 (331)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (331)
|.. .........-++...+.+-.... .....+.++.. ... ..++.. +...+... .....
T Consensus 175 l~~--~Gmt~~~~d~ll~H~Fg~e~~~~---~~diVq~Yr~~---l~~-~~N~~N--------l~~fl~ay----n~R~D 233 (326)
T KOG2931|consen 175 LYY--YGMTQGVKDYLLAHHFGKEELGN---NSDIVQEYRQH---LGE-RLNPKN--------LALFLNAY----NGRRD 233 (326)
T ss_pred HHh--hchhhhHHHHHHHHHhccccccc---cHHHHHHHHHH---HHh-cCChhH--------HHHHHHHh----cCCCC
Confidence 000 00111111111111111100000 01111111100 000 000000 00000000 00000
Q ss_pred CCCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhC--CCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHh
Q 020067 250 FFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAW--PEADFKVVADAGHSANEPGIAAELVATNEKLKNL 326 (331)
Q Consensus 250 ~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 326 (331)
+ ..........+ +||+|++.|++.+.+. .+.++...+ .+.++..+.+||-.+..++ |..+.+.+.-|++-
T Consensus 234 L---~~~r~~~~~tl-kc~vllvvGd~Sp~~~--~vv~~n~~Ldp~~ttllk~~d~g~l~~e~q-P~kl~ea~~~FlqG 305 (326)
T KOG2931|consen 234 L---SIERPKLGTTL-KCPVLLVVGDNSPHVS--AVVECNSKLDPTYTTLLKMADCGGLVQEEQ-PGKLAEAFKYFLQG 305 (326)
T ss_pred c---cccCCCcCccc-cccEEEEecCCCchhh--hhhhhhcccCcccceEEEEcccCCcccccC-chHHHHHHHHHHcc
Confidence 0 00111112256 4999999999998874 455566666 3678999999999999987 99999999999863
No 74
>PRK11460 putative hydrolase; Provisional
Probab=99.81 E-value=5.5e-19 Score=135.06 Aligned_cols=174 Identities=15% Similarity=0.168 Sum_probs=108.4
Q ss_pred CCCCCcEEEeccCCCCCC-CCCcccccCCCCcEEEEecCCCCCCCCCCC---------CCCccc---hHHHHHHHHH---
Q 020067 42 NPTGHPVVFLHGGPGGGT-TPSNRRFFDPDFYRIILFDQRGAGKSTPHA---------CLDQNT---TWDLIDDIEK--- 105 (331)
Q Consensus 42 ~~~~~~vl~~HG~~~~~~-~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~---------~~~~~~---~~~~~~~~~~--- 105 (331)
.+..++||++||++++.. +......+...++.+..++.+|...+.... ...... +.+..+.+.+
T Consensus 13 ~~~~~~vIlLHG~G~~~~~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i~ 92 (232)
T PRK11460 13 KPAQQLLLLFHGVGDNPVAMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETVR 92 (232)
T ss_pred CCCCcEEEEEeCCCCChHHHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHHH
Confidence 345678999999777654 445555554444444444445543221100 000111 1222222323
Q ss_pred -HHHHhCC--CcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchh
Q 020067 106 -LRQHLEI--PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENER 182 (331)
Q Consensus 106 -~~~~~~~--~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (331)
+.+..+. ++++++|||+||.+++.++..+|+.+.+++.+++.... .
T Consensus 93 ~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~~--------------------------~----- 141 (232)
T PRK11460 93 YWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYAS--------------------------L----- 141 (232)
T ss_pred HHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEecccccc--------------------------c-----
Confidence 3333343 57999999999999999999999888888776642100 0
Q ss_pred hhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhcc
Q 020067 183 SCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNID 262 (331)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 262 (331)
. ...
T Consensus 142 -----------------------------------------------------------------------~-----~~~ 145 (232)
T PRK11460 142 -----------------------------------------------------------------------P-----ETA 145 (232)
T ss_pred -----------------------------------------------------------------------c-----ccc
Confidence 0 000
Q ss_pred ccccccEEEEecCCCCccCCcchHHHHHhCC----CCcEEEecCCCCCCCcCCchhHHHHHHHHHH
Q 020067 263 NIRHINATIVQGRYDVCCPMMSAWDLHKAWP----EADFKVVADAGHSANEPGIAAELVATNEKLK 324 (331)
Q Consensus 263 ~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl 324 (331)
.. ++|++++||++|+++|.+.++++.+.+. ++++++++++||.+..+. .+.+.+.+.+++
T Consensus 146 ~~-~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i~~~~-~~~~~~~l~~~l 209 (232)
T PRK11460 146 PT-ATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGHAIDPRL-MQFALDRLRYTV 209 (232)
T ss_pred cC-CCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCHHH-HHHHHHHHHHHc
Confidence 12 5899999999999999999888888763 467888999999996554 444444444444
No 75
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.79 E-value=1.7e-17 Score=123.84 Aligned_cols=111 Identities=29% Similarity=0.295 Sum_probs=92.0
Q ss_pred EEeCCCCCCC--cEEEeccCCCCCC-CCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCC
Q 020067 37 WEQSGNPTGH--PVVFLHGGPGGGT-TPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIP 113 (331)
Q Consensus 37 ~~~~g~~~~~--~vl~~HG~~~~~~-~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (331)
|....+...+ +||-+||-+||.. +......+.+.|+|+|.+++||+|.++.+.. ..++..+-..-+.++++.++++
T Consensus 25 y~D~~~~gs~~gTVv~~hGsPGSH~DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~-~~~~n~er~~~~~~ll~~l~i~ 103 (297)
T PF06342_consen 25 YEDSLPSGSPLGTVVAFHGSPGSHNDFKYIRPPLDEAGIRFIGINYPGFGFTPGYPD-QQYTNEERQNFVNALLDELGIK 103 (297)
T ss_pred EEecCCCCCCceeEEEecCCCCCccchhhhhhHHHHcCeEEEEeCCCCCCCCCCCcc-cccChHHHHHHHHHHHHHcCCC
Confidence 4444443333 7999999888754 4566677778999999999999999997765 4688899999999999999976
Q ss_pred -cEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccch
Q 020067 114 -EWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLR 150 (331)
Q Consensus 114 -~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~ 150 (331)
+++++|||.||-.|+.+|..+| ..|+++++|+...
T Consensus 104 ~~~i~~gHSrGcenal~la~~~~--~~g~~lin~~G~r 139 (297)
T PF06342_consen 104 GKLIFLGHSRGCENALQLAVTHP--LHGLVLINPPGLR 139 (297)
T ss_pred CceEEEEeccchHHHHHHHhcCc--cceEEEecCCccc
Confidence 7889999999999999999996 6799999987653
No 76
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.79 E-value=1.2e-17 Score=122.21 Aligned_cols=223 Identities=14% Similarity=0.065 Sum_probs=137.4
Q ss_pred CCCcEEEecc-CCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHH-HhCCCcEEEEEeC
Q 020067 44 TGHPVVFLHG-GPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQ-HLEIPEWQVFGGS 121 (331)
Q Consensus 44 ~~~~vl~~HG-~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~lvG~S 121 (331)
.+..++++|- |+++..+..+...+ ...+.++++++||+|.-...+ .-.+++++++.+...+. -+..+++.++|||
T Consensus 6 ~~~~L~cfP~AGGsa~~fr~W~~~l-p~~iel~avqlPGR~~r~~ep--~~~di~~Lad~la~el~~~~~d~P~alfGHS 82 (244)
T COG3208 6 ARLRLFCFPHAGGSASLFRSWSRRL-PADIELLAVQLPGRGDRFGEP--LLTDIESLADELANELLPPLLDAPFALFGHS 82 (244)
T ss_pred CCceEEEecCCCCCHHHHHHHHhhC-CchhheeeecCCCcccccCCc--ccccHHHHHHHHHHHhccccCCCCeeecccc
Confidence 3445777776 54445555555544 557999999999999876554 35689999999988887 4555789999999
Q ss_pred hhHHHHHHHHHhCC---CceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhccccCCCch
Q 020067 122 WGSTLALAYSLAHP---DKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDK 198 (331)
Q Consensus 122 ~Gg~~a~~~a~~~p---~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (331)
|||++|.++|.+.. ..+.++.+.++..+..... ..+....-..++..+...-.
T Consensus 83 mGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~--------------------~~i~~~~D~~~l~~l~~lgG---- 138 (244)
T COG3208 83 MGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRG--------------------KQIHHLDDADFLADLVDLGG---- 138 (244)
T ss_pred hhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCccc--------------------CCccCCCHHHHHHHHHHhCC----
Confidence 99999999998752 2367777777654411100 00000111111111111110
Q ss_pred HHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCCC
Q 020067 199 ETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDV 278 (331)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~ 278 (331)
.+++.+.......+.....+.+......+.+ ..-..+ +||+.++.|++|.
T Consensus 139 ---------------------~p~e~led~El~~l~LPilRAD~~~~e~Y~~--------~~~~pl-~~pi~~~~G~~D~ 188 (244)
T COG3208 139 ---------------------TPPELLEDPELMALFLPILRADFRALESYRY--------PPPAPL-ACPIHAFGGEKDH 188 (244)
T ss_pred ---------------------CChHHhcCHHHHHHHHHHHHHHHHHhccccc--------CCCCCc-CcceEEeccCcch
Confidence 1111111111111111111111111111101 011345 6999999999999
Q ss_pred ccCCcchHHHHHhCC-CCcEEEecCCCCCCCcCCchhHHHHHHHHHHH
Q 020067 279 CCPMMSAWDLHKAWP-EADFKVVADAGHSANEPGIAAELVATNEKLKN 325 (331)
Q Consensus 279 ~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~ 325 (331)
.+..+....|.+... ..++++++ +||+...++ .+++++.|.+.+.
T Consensus 189 ~vs~~~~~~W~~~t~~~f~l~~fd-GgHFfl~~~-~~~v~~~i~~~l~ 234 (244)
T COG3208 189 EVSRDELGAWREHTKGDFTLRVFD-GGHFFLNQQ-REEVLARLEQHLA 234 (244)
T ss_pred hccHHHHHHHHHhhcCCceEEEec-Ccceehhhh-HHHHHHHHHHHhh
Confidence 999998888988875 68999998 899999987 8899999988885
No 77
>PLN02442 S-formylglutathione hydrolase
Probab=99.78 E-value=2.8e-17 Score=129.64 Aligned_cols=105 Identities=16% Similarity=0.115 Sum_probs=72.2
Q ss_pred CCCcEEEeccCCCCCCCC----CcccccCCCCcEEEEecCCCCCC-----CCC-----C-------C-------CCCccc
Q 020067 44 TGHPVVFLHGGPGGGTTP----SNRRFFDPDFYRIILFDQRGAGK-----STP-----H-------A-------CLDQNT 95 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~~~----~~~~~~~~~g~~vi~~D~~G~G~-----s~~-----~-------~-------~~~~~~ 95 (331)
..|+|+++||++++...+ .....+...|+.|+.+|..++|. +.. . . ....+.
T Consensus 46 ~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (283)
T PLN02442 46 KVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYDYV 125 (283)
T ss_pred CCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcceeeccccCCCcccchhhhH
Confidence 357899999977664322 12233445799999999887661 100 0 0 000112
Q ss_pred hHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEecccc
Q 020067 96 TWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFL 148 (331)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~ 148 (331)
.+++...+....+.++.++++++||||||..++.++.++|+++++++++++..
T Consensus 126 ~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~ 178 (283)
T PLN02442 126 VKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIA 178 (283)
T ss_pred HHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCcc
Confidence 33444455555555677899999999999999999999999999999998864
No 78
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.78 E-value=5.3e-17 Score=127.95 Aligned_cols=105 Identities=16% Similarity=0.177 Sum_probs=73.3
Q ss_pred CCCcEEEeccCCCCCCCCCc---cccc-CCCCcEEEEecC--CCCCCCCCCC------------------CCCccchH-H
Q 020067 44 TGHPVVFLHGGPGGGTTPSN---RRFF-DPDFYRIILFDQ--RGAGKSTPHA------------------CLDQNTTW-D 98 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~~~~~---~~~~-~~~g~~vi~~D~--~G~G~s~~~~------------------~~~~~~~~-~ 98 (331)
+.|+|+++||++++...+.. ...+ .+.|+.||+||. +|+|.+.... ....+... .
T Consensus 41 ~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~ 120 (275)
T TIGR02821 41 PVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMYSY 120 (275)
T ss_pred CCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCccccccCCcCcccccchHHHH
Confidence 35789999998766543321 2233 346999999998 5554332100 00012233 3
Q ss_pred HHHHHHHHHHH---hCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEecccc
Q 020067 99 LIDDIEKLRQH---LEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFL 148 (331)
Q Consensus 99 ~~~~~~~~~~~---~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~ 148 (331)
+++++..+++. ++.++++++||||||.+++.++.++|+.+++++++++..
T Consensus 121 ~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~ 173 (275)
T TIGR02821 121 IVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIV 173 (275)
T ss_pred HHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCcc
Confidence 46778777776 455689999999999999999999999999999988764
No 79
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.78 E-value=3.4e-18 Score=129.84 Aligned_cols=176 Identities=18% Similarity=0.152 Sum_probs=103.3
Q ss_pred CCCCcEEEeccCCCCCCCCCcccc--cCCCCcEEEEecCCC------CCC---CC-----CCCC--CCccchHHHHHHHH
Q 020067 43 PTGHPVVFLHGGPGGGTTPSNRRF--FDPDFYRIILFDQRG------AGK---ST-----PHAC--LDQNTTWDLIDDIE 104 (331)
Q Consensus 43 ~~~~~vl~~HG~~~~~~~~~~~~~--~~~~g~~vi~~D~~G------~G~---s~-----~~~~--~~~~~~~~~~~~~~ 104 (331)
+..++||++||.+++...+..... ....+..++.++-|. .|. +- .... .....+.+.++.+.
T Consensus 12 ~~~~lvi~LHG~G~~~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~~l~ 91 (216)
T PF02230_consen 12 KAKPLVILLHGYGDSEDLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAERLD 91 (216)
T ss_dssp T-SEEEEEE--TTS-HHHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHHHHH
T ss_pred CCceEEEEECCCCCCcchhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHHHHH
Confidence 367789999998776543322222 233567777776542 222 10 0000 01122333444455
Q ss_pred HHHHHh-----CCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCc
Q 020067 105 KLRQHL-----EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPE 179 (331)
Q Consensus 105 ~~~~~~-----~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (331)
++++.. ..++++++|+|+||.+++.++.++|+.+.++|++++.......
T Consensus 92 ~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~-------------------------- 145 (216)
T PF02230_consen 92 ELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESE-------------------------- 145 (216)
T ss_dssp HHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCC--------------------------
T ss_pred HHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeecccccccc--------------------------
Confidence 555432 4468999999999999999999999999999999985432100
Q ss_pred chhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhh
Q 020067 180 NERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLD 259 (331)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (331)
...
T Consensus 146 -----------------------------------------------------------------------------~~~ 148 (216)
T PF02230_consen 146 -----------------------------------------------------------------------------LED 148 (216)
T ss_dssp -----------------------------------------------------------------------------CHC
T ss_pred -----------------------------------------------------------------------------ccc
Confidence 000
Q ss_pred hccccccccEEEEecCCCCccCCcchHHHHHhC----CCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHh
Q 020067 260 NIDNIRHINATIVQGRYDVCCPMMSAWDLHKAW----PEADFKVVADAGHSANEPGIAAELVATNEKLKNL 326 (331)
Q Consensus 260 ~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 326 (331)
......++|++++||++|+++|.+.++...+.+ .+++++.+++.||.+.. +.++.+.+||++
T Consensus 149 ~~~~~~~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i~~-----~~~~~~~~~l~~ 214 (216)
T PF02230_consen 149 RPEALAKTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEISP-----EELRDLREFLEK 214 (216)
T ss_dssp CHCCCCTS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS--H-----HHHHHHHHHHHH
T ss_pred cccccCCCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCCCH-----HHHHHHHHHHhh
Confidence 111111489999999999999998888777766 35788999999999843 447778888875
No 80
>PLN00021 chlorophyllase
Probab=99.77 E-value=2.5e-17 Score=130.42 Aligned_cols=104 Identities=13% Similarity=0.067 Sum_probs=70.5
Q ss_pred CCCCcEEEeccCCCCCC-CCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHH-------hCCCc
Q 020067 43 PTGHPVVFLHGGPGGGT-TPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQH-------LEIPE 114 (331)
Q Consensus 43 ~~~~~vl~~HG~~~~~~-~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~ 114 (331)
.+.|+|||+||++.+.. |......+.+.||.|+++|++|++.+.... ...+..++.+.+.+.++. .+.++
T Consensus 50 g~~PvVv~lHG~~~~~~~y~~l~~~Las~G~~VvapD~~g~~~~~~~~--~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~ 127 (313)
T PLN00021 50 GTYPVLLFLHGYLLYNSFYSQLLQHIASHGFIVVAPQLYTLAGPDGTD--EIKDAAAVINWLSSGLAAVLPEGVRPDLSK 127 (313)
T ss_pred CCCCEEEEECCCCCCcccHHHHHHHHHhCCCEEEEecCCCcCCCCchh--hHHHHHHHHHHHHhhhhhhcccccccChhh
Confidence 35688999999766544 445666777789999999999865432111 011122222223222222 23468
Q ss_pred EEEEEeChhHHHHHHHHHhCCC-----ceeeEEEecccc
Q 020067 115 WQVFGGSWGSTLALAYSLAHPD-----KVTGLVLRGIFL 148 (331)
Q Consensus 115 v~lvG~S~Gg~~a~~~a~~~p~-----~v~~li~~~~~~ 148 (331)
++++|||+||.+++.+|..+++ +++++|+++|..
T Consensus 128 v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~ 166 (313)
T PLN00021 128 LALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVD 166 (313)
T ss_pred eEEEEECcchHHHHHHHhhccccccccceeeEEeecccc
Confidence 9999999999999999998874 689999998753
No 81
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.75 E-value=3.7e-17 Score=114.13 Aligned_cols=190 Identities=14% Similarity=0.120 Sum_probs=128.4
Q ss_pred eeEeCCC-ceEEEEeCCCCCCCcEEEeccC---CCCCC---CCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHH
Q 020067 26 ILKVSDI-HTIYWEQSGNPTGHPVVFLHGG---PGGGT---TPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWD 98 (331)
Q Consensus 26 ~~~~~~g-~~l~~~~~g~~~~~~vl~~HG~---~~~~~---~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~ 98 (331)
.++..-| ....|.....+..|..|++|-- +++.. ....+..+.+.||.++.+|+||.|.|....+..--..+|
T Consensus 8 ~i~Gp~G~le~~~~~~~~~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~GiGE~~D 87 (210)
T COG2945 8 IINGPAGRLEGRYEPAKTPAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDNGIGELED 87 (210)
T ss_pred EecCCcccceeccCCCCCCCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcccCCcchHHH
Confidence 4444444 1233433333456777888873 33322 245666677899999999999999999776433333444
Q ss_pred HHHHHHHHHHHhCCCcE-EEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccC
Q 020067 99 LIDDIEKLRQHLEIPEW-QVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLI 177 (331)
Q Consensus 99 ~~~~~~~~~~~~~~~~v-~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (331)
....+..+.+.....+. .+.|+|+|+++++.+|.+.|+ ....+.+.++....
T Consensus 88 a~aaldW~~~~hp~s~~~~l~GfSFGa~Ia~~la~r~~e-~~~~is~~p~~~~~-------------------------- 140 (210)
T COG2945 88 AAAALDWLQARHPDSASCWLAGFSFGAYIAMQLAMRRPE-ILVFISILPPINAY-------------------------- 140 (210)
T ss_pred HHHHHHHHHhhCCCchhhhhcccchHHHHHHHHHHhccc-ccceeeccCCCCch--------------------------
Confidence 44444444444443444 689999999999999999876 44555554432100
Q ss_pred CcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchh
Q 020067 178 PENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFL 257 (331)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (331)
+
T Consensus 141 ----------------------------------------------------------------------------d--- 141 (210)
T COG2945 141 ----------------------------------------------------------------------------D--- 141 (210)
T ss_pred ----------------------------------------------------------------------------h---
Confidence 0
Q ss_pred hhhccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHH
Q 020067 258 LDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKN 325 (331)
Q Consensus 258 ~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~ 325 (331)
...+.-. .+|.++|+|+.|.+++.....++++. ...+++++++++|+++.. -..+.+.|.+|+.
T Consensus 142 fs~l~P~-P~~~lvi~g~~Ddvv~l~~~l~~~~~-~~~~~i~i~~a~HFF~gK--l~~l~~~i~~~l~ 205 (210)
T COG2945 142 FSFLAPC-PSPGLVIQGDADDVVDLVAVLKWQES-IKITVITIPGADHFFHGK--LIELRDTIADFLE 205 (210)
T ss_pred hhhccCC-CCCceeEecChhhhhcHHHHHHhhcC-CCCceEEecCCCceeccc--HHHHHHHHHHHhh
Confidence 0012222 48999999999999998887777776 468899999999999766 6888999999984
No 82
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.74 E-value=9.5e-18 Score=127.90 Aligned_cols=178 Identities=18% Similarity=0.128 Sum_probs=112.3
Q ss_pred CCCcEEEeccCCC-CCCCCCcccccCCCCcEEEEecCCCCCC-CCCCCCCCcc--------chHHHHHHHHHHHHHhC--
Q 020067 44 TGHPVVFLHGGPG-GGTTPSNRRFFDPDFYRIILFDQRGAGK-STPHACLDQN--------TTWDLIDDIEKLRQHLE-- 111 (331)
Q Consensus 44 ~~~~vl~~HG~~~-~~~~~~~~~~~~~~g~~vi~~D~~G~G~-s~~~~~~~~~--------~~~~~~~~~~~~~~~~~-- 111 (331)
+.|.||++|+..| .......+..++++||.|+++|+.+... .......... ..+...+++...++.+.
T Consensus 13 ~~~~Vvv~~d~~G~~~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~ 92 (218)
T PF01738_consen 13 PRPAVVVIHDIFGLNPNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYLRAQ 92 (218)
T ss_dssp SEEEEEEE-BTTBS-HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHHHCT
T ss_pred CCCEEEEEcCCCCCchHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHhc
Confidence 4678999999544 4444567788888999999999865443 1111100000 12345666666666552
Q ss_pred ----CCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHH
Q 020067 112 ----IPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVD 187 (331)
Q Consensus 112 ----~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (331)
.++|.++|+|+||.+++.++... ..++++|..-|....
T Consensus 93 ~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~~~------------------------------------- 134 (218)
T PF01738_consen 93 PEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGSPP------------------------------------- 134 (218)
T ss_dssp TTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SSSG-------------------------------------
T ss_pred cccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCCCC-------------------------------------
Confidence 35899999999999999999887 578888876651110
Q ss_pred hhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccc
Q 020067 188 AYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHI 267 (331)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~ 267 (331)
........++ ++
T Consensus 135 -------------------------------------------------------------------~~~~~~~~~~-~~ 146 (218)
T PF01738_consen 135 -------------------------------------------------------------------PPPLEDAPKI-KA 146 (218)
T ss_dssp -------------------------------------------------------------------GGHHHHGGG---S
T ss_pred -------------------------------------------------------------------Ccchhhhccc-CC
Confidence 0112234556 59
Q ss_pred cEEEEecCCCCccCCcchHHHHHhC----CCCcEEEecCCCCCCCcCC-------chhHHHHHHHHHHHhh
Q 020067 268 NATIVQGRYDVCCPMMSAWDLHKAW----PEADFKVVADAGHSANEPG-------IAAELVATNEKLKNLI 327 (331)
Q Consensus 268 P~l~i~G~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~~~-------~~~~~~~~i~~fl~~~ 327 (331)
|+++++|++|+.++.+..+.+.+.+ ...++++++|++|.+.... ..++..+.+.+|+++.
T Consensus 147 P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~~ 217 (218)
T PF01738_consen 147 PVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKRH 217 (218)
T ss_dssp -EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC-
T ss_pred CEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHhc
Confidence 9999999999999988777766665 5688999999999886532 2455667777777654
No 83
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.73 E-value=1.1e-16 Score=121.37 Aligned_cols=106 Identities=15% Similarity=0.036 Sum_probs=71.0
Q ss_pred CCCcEEEeccCCCCCC-C---CCcccccCCCCcEEEEecCCCCCCCCCCCCC--------CccchHHHHHHHHHHHHHhC
Q 020067 44 TGHPVVFLHGGPGGGT-T---PSNRRFFDPDFYRIILFDQRGAGKSTPHACL--------DQNTTWDLIDDIEKLRQHLE 111 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~-~---~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~--------~~~~~~~~~~~~~~~~~~~~ 111 (331)
..|+||++||++++.. + +.+.....+.||.|+++|++|++.+...... ......++.+.+..+.+..+
T Consensus 12 ~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 91 (212)
T TIGR01840 12 PRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKANYS 91 (212)
T ss_pred CCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHhcC
Confidence 5688999999776533 2 1233334457999999999998754321100 01112233333333344433
Q ss_pred --CCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccc
Q 020067 112 --IPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLL 149 (331)
Q Consensus 112 --~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~ 149 (331)
.++++|+|||+||.+++.++..+|+.+.+++.+++...
T Consensus 92 id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~~ 131 (212)
T TIGR01840 92 IDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLPY 131 (212)
T ss_pred cChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCcc
Confidence 35899999999999999999999999999998887543
No 84
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.73 E-value=2.4e-16 Score=136.03 Aligned_cols=120 Identities=13% Similarity=0.055 Sum_probs=90.6
Q ss_pred EeCCCceEEEEeC---CCCCCCcEEEeccCCCCCC----C-CCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHH
Q 020067 28 KVSDIHTIYWEQS---GNPTGHPVVFLHGGPGGGT----T-PSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDL 99 (331)
Q Consensus 28 ~~~~g~~l~~~~~---g~~~~~~vl~~HG~~~~~~----~-~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~ 99 (331)
.+.||.+|++..+ +....|+||++||++.+.. + ......++++||.|+++|+||+|.|..... ... ...
T Consensus 2 ~~~DG~~L~~~~~~P~~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~--~~~-~~~ 78 (550)
T TIGR00976 2 PMRDGTRLAIDVYRPAGGGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFD--LLG-SDE 78 (550)
T ss_pred cCCCCCEEEEEEEecCCCCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceE--ecC-ccc
Confidence 4568888885444 3334578999999765432 2 224456778999999999999999986542 222 457
Q ss_pred HHHHHHHHHHhC-----CCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccch
Q 020067 100 IDDIEKLRQHLE-----IPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLR 150 (331)
Q Consensus 100 ~~~~~~~~~~~~-----~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~ 150 (331)
++|+.++++.+. ..+|.++|+|+||.+++.+|..+|++++++|..++....
T Consensus 79 ~~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d~ 134 (550)
T TIGR00976 79 AADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWDL 134 (550)
T ss_pred chHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccch
Confidence 777777777763 248999999999999999999999999999998876543
No 85
>COG0400 Predicted esterase [General function prediction only]
Probab=99.72 E-value=1.3e-16 Score=117.17 Aligned_cols=175 Identities=17% Similarity=0.161 Sum_probs=114.2
Q ss_pred CCCCCCcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCC--CCCCC--CCCCCCcc-------chHHHHHHHHHHHHH
Q 020067 41 GNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRG--AGKST--PHACLDQN-------TTWDLIDDIEKLRQH 109 (331)
Q Consensus 41 g~~~~~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G--~G~s~--~~~~~~~~-------~~~~~~~~~~~~~~~ 109 (331)
+.+..|+||++||.+++....-........++.++.+.-+- .|.-. .......+ ..+.+++-+..+.+.
T Consensus 14 ~~p~~~~iilLHG~Ggde~~~~~~~~~~~P~~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~~ 93 (207)
T COG0400 14 GDPAAPLLILLHGLGGDELDLVPLPELILPNATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAEE 93 (207)
T ss_pred CCCCCcEEEEEecCCCChhhhhhhhhhcCCCCeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHHHH
Confidence 44566789999997666443222333333445555553221 11000 00000112 233445555555666
Q ss_pred hCC--CcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHH
Q 020067 110 LEI--PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVD 187 (331)
Q Consensus 110 ~~~--~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (331)
.+. ++++++|+|.||.+++.+..++|+.++++|+.++.......
T Consensus 94 ~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~~---------------------------------- 139 (207)
T COG0400 94 YGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEPE---------------------------------- 139 (207)
T ss_pred hCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCCc----------------------------------
Confidence 666 68999999999999999999999999999999986542100
Q ss_pred hhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccc
Q 020067 188 AYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHI 267 (331)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~ 267 (331)
.....+.+
T Consensus 140 ------------------------------------------------------------------------~~~~~~~~ 147 (207)
T COG0400 140 ------------------------------------------------------------------------LLPDLAGT 147 (207)
T ss_pred ------------------------------------------------------------------------cccccCCC
Confidence 01111169
Q ss_pred cEEEEecCCCCccCCcchHHHHHhC----CCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhh
Q 020067 268 NATIVQGRYDVCCPMMSAWDLHKAW----PEADFKVVADAGHSANEPGIAAELVATNEKLKNLI 327 (331)
Q Consensus 268 P~l~i~G~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 327 (331)
|+++++|+.|++||...+.++.+.+ -+++...++ .||.+..+. .+.+.+|+...
T Consensus 148 pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~-~GH~i~~e~-----~~~~~~wl~~~ 205 (207)
T COG0400 148 PILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWHE-GGHEIPPEE-----LEAARSWLANT 205 (207)
T ss_pred eEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEec-CCCcCCHHH-----HHHHHHHHHhc
Confidence 9999999999999998888888776 356778888 999985554 67777787653
No 86
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.71 E-value=6.5e-17 Score=131.76 Aligned_cols=122 Identities=12% Similarity=-0.025 Sum_probs=86.3
Q ss_pred eeEeCCCceEEEEeCCCCCCCcEEEeccCCCCCCC--CC--cccccC--CCCcEEEEecCCCCCCCCCCCCCCccchHHH
Q 020067 26 ILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTT--PS--NRRFFD--PDFYRIILFDQRGAGKSTPHACLDQNTTWDL 99 (331)
Q Consensus 26 ~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~~~--~~--~~~~~~--~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~ 99 (331)
++...+-..+.-..+. +++|++|++||+.++..+ |. +...+. ..+|+||++|++|+|.+..+.. ......+
T Consensus 23 ~l~~~~~~si~~s~Fn-~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a--~~~t~~v 99 (442)
T TIGR03230 23 YIVPGQPDSIADCNFN-HETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTS--AAYTKLV 99 (442)
T ss_pred EEecCChhhhhhcCcC-CCCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccc--cccHHHH
Confidence 4444443334333333 368999999998765432 21 233333 2469999999999998865432 2234566
Q ss_pred HHHHHHHHHHh------CCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccch
Q 020067 100 IDDIEKLRQHL------EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLR 150 (331)
Q Consensus 100 ~~~~~~~~~~~------~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~ 150 (331)
++++.++++.+ +.++++|+||||||.+|..++..+|++|.++++++|+.+.
T Consensus 100 g~~la~lI~~L~~~~gl~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP~ 156 (442)
T TIGR03230 100 GKDVAKFVNWMQEEFNYPWDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGPT 156 (442)
T ss_pred HHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCCc
Confidence 77777777754 3679999999999999999999999999999999997643
No 87
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.70 E-value=3.4e-16 Score=124.92 Aligned_cols=232 Identities=13% Similarity=0.110 Sum_probs=120.9
Q ss_pred CccceeEeCCCceEE-EEeCCCCCC-CcEEEeccCCCCC--CCCCc-ccccCCCCcEEEEecCCCCCCCCCCCCCCccch
Q 020067 22 YSTGILKVSDIHTIY-WEQSGNPTG-HPVVFLHGGPGGG--TTPSN-RRFFDPDFYRIILFDQRGAGKSTPHACLDQNTT 96 (331)
Q Consensus 22 ~~~~~~~~~~g~~l~-~~~~g~~~~-~~vl~~HG~~~~~--~~~~~-~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~ 96 (331)
.++-.|...++ +|. |....+.++ .|+|++-||..+- .++.. ...+...|+.++++|.||.|.|....- ..+.
T Consensus 165 i~~v~iP~eg~-~I~g~LhlP~~~~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l--~~D~ 241 (411)
T PF06500_consen 165 IEEVEIPFEGK-TIPGYLHLPSGEKPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPL--TQDS 241 (411)
T ss_dssp EEEEEEEETTC-EEEEEEEESSSSS-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S---S-C
T ss_pred cEEEEEeeCCc-EEEEEEEcCCCCCCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCC--CcCH
Confidence 44555666664 443 322222222 2455555554442 33333 355677999999999999999864331 1223
Q ss_pred HHHHHHHHHHHHHh---CCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhh
Q 020067 97 WDLIDDIEKLRQHL---EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESF 173 (331)
Q Consensus 97 ~~~~~~~~~~~~~~---~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (331)
+.+...+.+.+... +..+|.++|.|+||.+|.++|..+++|++++|..+++....-...+.
T Consensus 242 ~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~ft~~~~---------------- 305 (411)
T PF06500_consen 242 SRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHHFFTDPEW---------------- 305 (411)
T ss_dssp CHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SCGGH-HHH----------------
T ss_pred HHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHhhhhccHHH----------------
Confidence 34444444444443 44589999999999999999999989999999999875432110000
Q ss_pred hccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCC
Q 020067 174 RDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPS 253 (331)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (331)
....+... ...+..++..... +.+. +...+.
T Consensus 306 ~~~~P~my----~d~LA~rlG~~~~----------------------~~~~--------l~~el~--------------- 336 (411)
T PF06500_consen 306 QQRVPDMY----LDVLASRLGMAAV----------------------SDES--------LRGELN--------------- 336 (411)
T ss_dssp HTTS-HHH----HHHHHHHCT-SCE-----------------------HHH--------HHHHGG---------------
T ss_pred HhcCCHHH----HHHHHHHhCCccC----------------------CHHH--------HHHHHH---------------
Confidence 01111111 1111111111100 0000 000000
Q ss_pred cchhh--hhc--cccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCC-CCCCcCCchhHHHHHHHHHHHhh
Q 020067 254 DSFLL--DNI--DNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAG-HSANEPGIAAELVATNEKLKNLI 327 (331)
Q Consensus 254 ~~~~~--~~l--~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~g-H~~~~~~~~~~~~~~i~~fl~~~ 327 (331)
.+.+. ..| .+. .+|+|.++|++|+++|.+..+-++..-.+.+...++... |.- -+..+..+.+||+..
T Consensus 337 ~~SLk~qGlL~~rr~-~~plL~i~~~~D~v~P~eD~~lia~~s~~gk~~~~~~~~~~~g-----y~~al~~~~~Wl~~~ 409 (411)
T PF06500_consen 337 KFSLKTQGLLSGRRC-PTPLLAINGEDDPVSPIEDSRLIAESSTDGKALRIPSKPLHMG-----YPQALDEIYKWLEDK 409 (411)
T ss_dssp GGSTTTTTTTTSS-B-SS-EEEEEETT-SSS-HHHHHHHHHTBTT-EEEEE-SSSHHHH-----HHHHHHHHHHHHHHH
T ss_pred hcCcchhccccCCCC-CcceEEeecCCCCCCCHHHHHHHHhcCCCCceeecCCCccccc-----hHHHHHHHHHHHHHh
Confidence 11111 123 455 599999999999999999999888887778888887554 332 445677788888653
No 88
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.70 E-value=2.9e-16 Score=126.63 Aligned_cols=296 Identities=12% Similarity=0.012 Sum_probs=157.8
Q ss_pred CCccceeEeCCCceE-EEEeCCCCC---CCcEEEeccCCCCCC--CCCcccccCCCCcEEEEecCCCCCCCCCCCCCCcc
Q 020067 21 PYSTGILKVSDIHTI-YWEQSGNPT---GHPVVFLHGGPGGGT--TPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQN 94 (331)
Q Consensus 21 ~~~~~~~~~~~g~~l-~~~~~g~~~---~~~vl~~HG~~~~~~--~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~ 94 (331)
+.++..+-..+-.+| +|....... .|+||++....+... ....++.++. |+.|+..|+..-+..+... ...
T Consensus 74 ~v~e~vV~~~~~~~L~~y~~~~~~~~~~~~pvLiV~Pl~g~~~~L~RS~V~~Ll~-g~dVYl~DW~~p~~vp~~~--~~f 150 (406)
T TIGR01849 74 PIRERVVWDKPFCRLIHFKRQGFRAELPGPAVLIVAPMSGHYATLLRSTVEALLP-DHDVYITDWVNARMVPLSA--GKF 150 (406)
T ss_pred eeEEEEEEECCCeEEEEECCCCcccccCCCcEEEEcCCchHHHHHHHHHHHHHhC-CCcEEEEeCCCCCCCchhc--CCC
Confidence 334444444444344 443332211 378999998765422 2567788888 9999999998877554333 357
Q ss_pred chHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhC-----CCceeeEEEeccccchhhhhhhHhhcccccCChhh
Q 020067 95 TTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAH-----PDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDA 169 (331)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~-----p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (331)
+++++++-+.++++.+|.+ ++++|+|+||..++.+++.+ |.+++.+++++++................ ...+.
T Consensus 151 ~ldDYi~~l~~~i~~~G~~-v~l~GvCqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~~p~~v~~~a~~-~~i~~ 228 (406)
T TIGR01849 151 DLEDYIDYLIEFIRFLGPD-IHVIAVCQPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDARASPTVVNELARE-KPIEW 228 (406)
T ss_pred CHHHHHHHHHHHHHHhCCC-CcEEEEchhhHHHHHHHHHHHhcCCCCCcceEEEEecCccCCCCCchHHHHhhc-ccHHH
Confidence 8999999999999999877 99999999999988777665 66799999999887754321110000000 00000
Q ss_pred HH-hhhccCCcc----h---h-hhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhh----h--cCCccHHH
Q 020067 170 WE-SFRDLIPEN----E---R-SCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENI----K--RGEDDIFS 234 (331)
Q Consensus 170 ~~-~~~~~~~~~----~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~--~~~~~~~~ 234 (331)
+. .....++.. . . ..+...-+..+........ -|..+.............. . ....+.-.
T Consensus 229 ~~~~~i~~vp~~~~g~gr~v~PG~~~~~~F~~mnp~r~~~~-----~~~~~~~l~~gd~~~~~~~~~f~~~y~d~~dlpg 303 (406)
T TIGR01849 229 FQHNVIMRVPFPYPGAGRLVYPGFLQLAGFISMNLDRHTKA-----HSDFFLHLVKGDGQEADKHRIFYDEYLAVMDMTA 303 (406)
T ss_pred HHHHhhhccCccccCCCCcccCHHHHHHHHHHcCcchHHHH-----HHHHHHHHhcCCcchHHHHHHHHHHhhhccCCcH
Confidence 00 000000000 0 0 0000000000010000000 0000000000000000000 0 00000011
Q ss_pred HHHhhhhhhhhhccCCCCCcch---hhhhccccccccEEEEecCCCCccCCcchHHHHHhC---C--CCcEEEecCCCCC
Q 020067 235 LAFARIENHYFLNKGFFPSDSF---LLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAW---P--EADFKVVADAGHS 306 (331)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~---~--~~~~~~~~~~gH~ 306 (331)
..+...-...|....+...... ..-.+++|+++|+|.+.|++|.++|+..++.+.+.+ + +.+.++.+++||.
T Consensus 304 e~y~~~v~~vf~~n~L~~G~l~v~G~~Vdl~~I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~ 383 (406)
T TIGR01849 304 EFYLQTIDVVFQQFLLPQGKFIVEGKRVDPGAITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHY 383 (406)
T ss_pred HHHHHHHHHHHHhCCccCCcEEECCEEecHHHCcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeE
Confidence 1111122222222222221221 223788883399999999999999999999998874 4 3557777789998
Q ss_pred CCc--CCchhHHHHHHHHHHHh
Q 020067 307 ANE--PGIAAELVATNEKLKNL 326 (331)
Q Consensus 307 ~~~--~~~~~~~~~~i~~fl~~ 326 (331)
-.. ....+++...|.+||.+
T Consensus 384 Gvf~G~r~~~~i~P~i~~wl~~ 405 (406)
T TIGR01849 384 GVFSGSRFREEIYPLVREFIRR 405 (406)
T ss_pred EEeeChhhhhhhchHHHHHHHh
Confidence 643 34578899999999875
No 89
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.70 E-value=1.7e-16 Score=114.15 Aligned_cols=154 Identities=18% Similarity=0.193 Sum_probs=101.8
Q ss_pred EEEeccCCCC--CCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCcEEEEEeChhHH
Q 020067 48 VVFLHGGPGG--GTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGST 125 (331)
Q Consensus 48 vl~~HG~~~~--~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~ 125 (331)
|+++||+.++ ..|..+...-++.-++|-.+|+ + ..+.+++.+.+.+.+..++ +++++||||+||.
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~~~V~~~~~------~------~P~~~~W~~~l~~~i~~~~-~~~ilVaHSLGc~ 67 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENSVRVEQPDW------D------NPDLDEWVQALDQAIDAID-EPTILVAHSLGCL 67 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTSEEEEEC--------T------S--HHHHHHHHHHCCHC-T-TTEEEEEETHHHH
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCCeEEecccc------C------CCCHHHHHHHHHHHHhhcC-CCeEEEEeCHHHH
Confidence 6899996665 4565555544444488888776 1 2357788888888777765 5799999999999
Q ss_pred HHHHHH-HhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhccccCCCchHHHHHH
Q 020067 126 LALAYS-LAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAA 204 (331)
Q Consensus 126 ~a~~~a-~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (331)
.++.++ .....+|+|+++++|+...... ...+
T Consensus 68 ~~l~~l~~~~~~~v~g~lLVAp~~~~~~~---------------------~~~~-------------------------- 100 (171)
T PF06821_consen 68 TALRWLAEQSQKKVAGALLVAPFDPDDPE---------------------PFPP-------------------------- 100 (171)
T ss_dssp HHHHHHHHTCCSSEEEEEEES--SCGCHH---------------------CCTC--------------------------
T ss_pred HHHHHHhhcccccccEEEEEcCCCccccc---------------------chhh--------------------------
Confidence 999999 7778899999999987532000 0000
Q ss_pred HHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCCCccCCcc
Q 020067 205 ARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMS 284 (331)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~ 284 (331)
.. ..........+ .+|.++|.+++|+++|.+.
T Consensus 101 -------------------~~----------------------------~~f~~~p~~~l-~~~~~viaS~nDp~vp~~~ 132 (171)
T PF06821_consen 101 -------------------EL----------------------------DGFTPLPRDPL-PFPSIVIASDNDPYVPFER 132 (171)
T ss_dssp -------------------GG----------------------------CCCTTSHCCHH-HCCEEEEEETTBSSS-HHH
T ss_pred -------------------hc----------------------------cccccCccccc-CCCeEEEEcCCCCccCHHH
Confidence 00 00000112234 4888999999999999999
Q ss_pred hHHHHHhCCCCcEEEecCCCCCCCcC
Q 020067 285 AWDLHKAWPEADFKVVADAGHSANEP 310 (331)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~gH~~~~~ 310 (331)
++++++.+ +++++.++++||+...+
T Consensus 133 a~~~A~~l-~a~~~~~~~~GHf~~~~ 157 (171)
T PF06821_consen 133 AQRLAQRL-GAELIILGGGGHFNAAS 157 (171)
T ss_dssp HHHHHHHH-T-EEEEETS-TTSSGGG
T ss_pred HHHHHHHc-CCCeEECCCCCCccccc
Confidence 99999998 89999999999998654
No 90
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.67 E-value=1.5e-16 Score=124.43 Aligned_cols=125 Identities=15% Similarity=0.092 Sum_probs=86.5
Q ss_pred ccceeEeCCCceEEEEeCCCCCCCcEEEeccCCCCC-C-CCC-cccccC-CCCcEEEEecCCCCCCCCCCCCCCccchHH
Q 020067 23 STGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGG-T-TPS-NRRFFD-PDFYRIILFDQRGAGKSTPHACLDQNTTWD 98 (331)
Q Consensus 23 ~~~~~~~~~g~~l~~~~~g~~~~~~vl~~HG~~~~~-~-~~~-~~~~~~-~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~ 98 (331)
..+.+...++..+.+....+ ++|++|++||+.++. . |.. ....++ ..+|+|+++|+++++.+.... ...+...
T Consensus 15 ~~~~~~~~~~~~~~~~~f~~-~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~--a~~~~~~ 91 (275)
T cd00707 15 CPQLLFADDPSSLKNSNFNP-SRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQ--AVNNTRV 91 (275)
T ss_pred CceEecCCChhhhhhcCCCC-CCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHH--HHHhHHH
Confidence 34455554555666665554 688999999987765 2 322 233344 468999999999984332111 1234445
Q ss_pred HHHHHHHHHHHh------CCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccch
Q 020067 99 LIDDIEKLRQHL------EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLR 150 (331)
Q Consensus 99 ~~~~~~~~~~~~------~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~ 150 (331)
+++++..+++.+ +.++++++||||||.++..++.++|+++.++++++|+.+.
T Consensus 92 v~~~la~~l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p~ 149 (275)
T cd00707 92 VGAELAKFLDFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGPL 149 (275)
T ss_pred HHHHHHHHHHHHHHhcCCChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCccc
Confidence 555666555543 4568999999999999999999999999999999987543
No 91
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.67 E-value=6e-15 Score=112.29 Aligned_cols=178 Identities=18% Similarity=0.105 Sum_probs=130.0
Q ss_pred CCcEEEecc-CCCCCCCCCcccccCCCCcEEEEecCCCC-CCCCCCCCC----C-----ccchHHHHHHHHHHHHHhC--
Q 020067 45 GHPVVFLHG-GPGGGTTPSNRRFFDPDFYRIILFDQRGA-GKSTPHACL----D-----QNTTWDLIDDIEKLRQHLE-- 111 (331)
Q Consensus 45 ~~~vl~~HG-~~~~~~~~~~~~~~~~~g~~vi~~D~~G~-G~s~~~~~~----~-----~~~~~~~~~~~~~~~~~~~-- 111 (331)
.|.||++|+ ++-+.........++..||.|+++|+-+. |.+...... . ..+..+...|+.+.++.+.
T Consensus 27 ~P~VIv~hei~Gl~~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~ 106 (236)
T COG0412 27 FPGVIVLHEIFGLNPHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYLARQ 106 (236)
T ss_pred CCEEEEEecccCCchHHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHHHHHhC
Confidence 378999999 55567778899999999999999999873 333222100 0 1223567778888777763
Q ss_pred ----CCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHH
Q 020067 112 ----IPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVD 187 (331)
Q Consensus 112 ----~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (331)
.++|.++|+||||.+++.++...| .+++.+..-+.....
T Consensus 107 ~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~~~------------------------------------ 149 (236)
T COG0412 107 PQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLIAD------------------------------------ 149 (236)
T ss_pred CCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCCCC------------------------------------
Confidence 457999999999999999999988 688888766533210
Q ss_pred hhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccc
Q 020067 188 AYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHI 267 (331)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~ 267 (331)
......++ ++
T Consensus 150 ---------------------------------------------------------------------~~~~~~~~-~~ 159 (236)
T COG0412 150 ---------------------------------------------------------------------DTADAPKI-KV 159 (236)
T ss_pred ---------------------------------------------------------------------cccccccc-cC
Confidence 00113456 59
Q ss_pred cEEEEecCCCCccCCcchHHHHHhCC----CCcEEEecCCCCCCCcC----------CchhHHHHHHHHHHHhhhc
Q 020067 268 NATIVQGRYDVCCPMMSAWDLHKAWP----EADFKVVADAGHSANEP----------GIAAELVATNEKLKNLIKN 329 (331)
Q Consensus 268 P~l~i~G~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~~----------~~~~~~~~~i~~fl~~~~~ 329 (331)
|+|+++|+.|..+|.+....+.+.+. +.++.+++++.|.+..+ ...+...+.+.+|+++...
T Consensus 160 pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~~~ 235 (236)
T COG0412 160 PVLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRLLG 235 (236)
T ss_pred cEEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEeCCCccccccCCCcccccCCHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999887777777762 57789999999988743 1355677788888887653
No 92
>PRK10162 acetyl esterase; Provisional
Probab=99.67 E-value=6e-15 Score=118.50 Aligned_cols=122 Identities=17% Similarity=0.078 Sum_probs=76.5
Q ss_pred CccceeEeCCCceEEEEeC--CCCCCCcEEEeccCCC---CC-CCCCcccccCC-CCcEEEEecCCCCCCCCCCCCCCcc
Q 020067 22 YSTGILKVSDIHTIYWEQS--GNPTGHPVVFLHGGPG---GG-TTPSNRRFFDP-DFYRIILFDQRGAGKSTPHACLDQN 94 (331)
Q Consensus 22 ~~~~~~~~~~g~~l~~~~~--g~~~~~~vl~~HG~~~---~~-~~~~~~~~~~~-~g~~vi~~D~~G~G~s~~~~~~~~~ 94 (331)
.+...+...+| .+..+.+ .....|+||++|||+. +. .+......++. .|+.|+++|+|.......+ .
T Consensus 57 ~~~~~i~~~~g-~i~~~~y~P~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~~~p-----~ 130 (318)
T PRK10162 57 TRAYMVPTPYG-QVETRLYYPQPDSQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEARFP-----Q 130 (318)
T ss_pred EEEEEEecCCC-ceEEEEECCCCCCCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCCCCC-----C
Confidence 33445555566 3333322 2224578999999663 22 23334455544 5999999999975443222 2
Q ss_pred chHHHHHHHHHH---HHHhCC--CcEEEEEeChhHHHHHHHHHhC------CCceeeEEEeccccc
Q 020067 95 TTWDLIDDIEKL---RQHLEI--PEWQVFGGSWGSTLALAYSLAH------PDKVTGLVLRGIFLL 149 (331)
Q Consensus 95 ~~~~~~~~~~~~---~~~~~~--~~v~lvG~S~Gg~~a~~~a~~~------p~~v~~li~~~~~~~ 149 (331)
..++..+.+..+ .+.++. ++++|+|+|+||.+++.++... +.++++++++.|...
T Consensus 131 ~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~ 196 (318)
T PRK10162 131 AIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYG 196 (318)
T ss_pred cHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccC
Confidence 344444443333 445554 5899999999999999998753 357889999887543
No 93
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.66 E-value=3.8e-15 Score=118.18 Aligned_cols=232 Identities=19% Similarity=0.173 Sum_probs=121.3
Q ss_pred ceeEeCCCceEEEE---eC-CCCCCCcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCC-----------
Q 020067 25 GILKVSDIHTIYWE---QS-GNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHA----------- 89 (331)
Q Consensus 25 ~~~~~~~g~~l~~~---~~-g~~~~~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~----------- 89 (331)
-.++..+|..++-+ .. +..+-|.||.+||.++....+.....+...||.|+++|.||+|......
T Consensus 59 v~f~s~~g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~~~~~~~~~a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~ 138 (320)
T PF05448_consen 59 VSFESFDGSRVYGWLYRPKNAKGKLPAVVQFHGYGGRSGDPFDLLPWAAAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGH 138 (320)
T ss_dssp EEEEEGGGEEEEEEEEEES-SSSSEEEEEEE--TT--GGGHHHHHHHHHTT-EEEEE--TTTSSSS-B-SSBSSS-SSSS
T ss_pred EEEEccCCCEEEEEEEecCCCCCCcCEEEEecCCCCCCCCcccccccccCCeEEEEecCCCCCCCCCCccccCCCCCccH
Confidence 34555566666532 22 2223467999999665533332233456799999999999999322110
Q ss_pred ------C-CCccchHHHHHHHHHHHHHh------CCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhh
Q 020067 90 ------C-LDQNTTWDLIDDIEKLRQHL------EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDW 156 (331)
Q Consensus 90 ------~-~~~~~~~~~~~~~~~~~~~~------~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~ 156 (331)
+ ...+-+..+..|....++.+ +.++|.+.|.|+||.+++.+|+..+ +|++++...|........
T Consensus 139 ~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~vP~l~d~~~~-- 215 (320)
T PF05448_consen 139 ITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAADVPFLCDFRRA-- 215 (320)
T ss_dssp TTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEESESSSSHHHH--
T ss_pred HhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEecCCCccchhhh--
Confidence 0 11122233445555444443 3458999999999999999999986 699999888755422110
Q ss_pred HhhcccccCChhhHHhhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHH
Q 020067 157 FYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLA 236 (331)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (331)
+.......+... +..+....... .......
T Consensus 216 -------------~~~~~~~~~y~~----~~~~~~~~d~~---------------------------------~~~~~~v 245 (320)
T PF05448_consen 216 -------------LELRADEGPYPE----IRRYFRWRDPH---------------------------------HEREPEV 245 (320)
T ss_dssp -------------HHHT--STTTHH----HHHHHHHHSCT---------------------------------HCHHHHH
T ss_pred -------------hhcCCccccHHH----HHHHHhccCCC---------------------------------cccHHHH
Confidence 000000000000 00000000000 0000001
Q ss_pred HhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCC-CCcEEEecCCCCCCCcCCchhH
Q 020067 237 FARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWP-EADFKVVADAGHSANEPGIAAE 315 (331)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~~~~~ 315 (331)
+..+. ..|......+| +||+++-.|-.|.+|||...-...+.++ .+++.++|..||....+ .
T Consensus 246 ~~~L~------------Y~D~~nfA~ri-~~pvl~~~gl~D~~cPP~t~fA~yN~i~~~K~l~vyp~~~He~~~~----~ 308 (320)
T PF05448_consen 246 FETLS------------YFDAVNFARRI-KCPVLFSVGLQDPVCPPSTQFAAYNAIPGPKELVVYPEYGHEYGPE----F 308 (320)
T ss_dssp HHHHH------------TT-HHHHGGG---SEEEEEEETT-SSS-HHHHHHHHCC--SSEEEEEETT--SSTTHH----H
T ss_pred HHHHh------------hhhHHHHHHHc-CCCEEEEEecCCCCCCchhHHHHHhccCCCeeEEeccCcCCCchhh----H
Confidence 11110 34566677888 5999999999999999999999999885 57899999999987322 2
Q ss_pred HHHHHHHHHHh
Q 020067 316 LVATNEKLKNL 326 (331)
Q Consensus 316 ~~~~i~~fl~~ 326 (331)
-.+...+||.+
T Consensus 309 ~~~~~~~~l~~ 319 (320)
T PF05448_consen 309 QEDKQLNFLKE 319 (320)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhc
Confidence 25666677654
No 94
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=99.66 E-value=5.3e-15 Score=119.09 Aligned_cols=310 Identities=12% Similarity=0.055 Sum_probs=165.9
Q ss_pred CCCCCccceeEeCCCceEEEEeC--CCCCCCcEEEeccCCCCCCCCC-------cccccCCCCcEEEEecCCCCCCCCCC
Q 020067 18 YVEPYSTGILKVSDIHTIYWEQS--GNPTGHPVVFLHGGPGGGTTPS-------NRRFFDPDFYRIILFDQRGAGKSTPH 88 (331)
Q Consensus 18 ~~~~~~~~~~~~~~g~~l~~~~~--g~~~~~~vl~~HG~~~~~~~~~-------~~~~~~~~g~~vi~~D~~G~G~s~~~ 88 (331)
...+.+++.+++.||..+..... +..++|+|++.||...++..|- +.-.++.+||.|+.-+.||--.|...
T Consensus 44 ~gy~~E~h~V~T~DgYiL~lhRIp~~~~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h 123 (403)
T KOG2624|consen 44 YGYPVEEHEVTTEDGYILTLHRIPRGKKKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKH 123 (403)
T ss_pred cCCceEEEEEEccCCeEEEEeeecCCCCCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccchhh
Confidence 34678999999999985544332 3246789999999655544332 22224569999999999997666422
Q ss_pred C--------CCCccchHH-----HHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCC---ceeeEEEeccccchhh
Q 020067 89 A--------CLDQNTTWD-----LIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPD---KVTGLVLRGIFLLRKK 152 (331)
Q Consensus 89 ~--------~~~~~~~~~-----~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~---~v~~li~~~~~~~~~~ 152 (331)
. .....++++ +.+.|..+++.-+.++++.+|||.|+...+..+...|+ +|+..++++|......
T Consensus 124 ~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~~~k~ 203 (403)
T KOG2624|consen 124 KKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAAFPKH 203 (403)
T ss_pred cccCCcCCcceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecchhhhcc
Confidence 1 123345554 44455555666678899999999999999999998876 7999999999885431
Q ss_pred hhhhHhhcccccC-ChhhHHhhhccCCcchhhhhHHhhccccCCCchHHHHHHHH---HhhhHHHhh---h----cCCCC
Q 020067 153 EIDWFYEGGAAAI-YPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAAR---AWTKWEMMT---A----HLLPN 221 (331)
Q Consensus 153 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~---~----~~~~~ 221 (331)
............. ....+..+.....-.....+.+.+...+............. .+..+.... . .....
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~fg~~~f~p~~~~~~~~~~~~C~~~~~~~~lC~~~~~~~~G~~~~~~n~~~~~~~~~h~ 283 (403)
T KOG2624|consen 204 IKSLLNKFLDPFLGAFSLLPLLFGRKEFLPSNLFIKKFARKICSGSKIFADLCSNFLFLLVGWNSNNWNTTLLPVYLAHL 283 (403)
T ss_pred cccHHHHhhhhhhhhhhHHHHhcCCccccchhhHHHHHHHHHhcchhHHHHHHHHHHHHHcCcchHhhhhcccchhhccC
Confidence 1111000000000 00011111111111111122222222222211111100000 000000000 0 00001
Q ss_pred hhhhhcCCccHHHHHHhhhhhhhhh-----ccCCCCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCCCCc
Q 020067 222 EENIKRGEDDIFSLAFARIENHYFL-----NKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEAD 296 (331)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~ 296 (331)
+..........+.+.........|- +...........-.+.++ ++|+.+.+|++|.++.+++.+.+....+++.
T Consensus 284 pagtSvk~~~H~~Q~~~s~~f~~yD~G~~~N~~~Y~q~~pP~Y~l~~i-~~P~~l~~g~~D~l~~~~DV~~~~~~~~~~~ 362 (403)
T KOG2624|consen 284 PAGTSVKNIVHWAQIVRSGKFRKYDYGSKRNLKHYGQSTPPEYDLTNI-KVPTALYYGDNDWLADPEDVLILLLVLPNSV 362 (403)
T ss_pred CCCccHHHHHHHHHHhcCCCccccCCCccccHhhcCCCCCCCCCcccc-ccCEEEEecCCcccCCHHHHHHHHHhccccc
Confidence 1111111111222222221111110 111111122233367888 6999999999999999999998888887655
Q ss_pred EEE---ecCCCCCCC--cCCchhHHHHHHHHHHHhhh
Q 020067 297 FKV---VADAGHSAN--EPGIAAELVATNEKLKNLIK 328 (331)
Q Consensus 297 ~~~---~~~~gH~~~--~~~~~~~~~~~i~~fl~~~~ 328 (331)
... +++-.|+-+ -...++++.+.|.+.++...
T Consensus 363 ~~~~~~~~~ynHlDFi~g~da~~~vy~~vi~~~~~~~ 399 (403)
T KOG2624|consen 363 IKYIVPIPEYNHLDFIWGLDAKEEVYDPVIERLRLFE 399 (403)
T ss_pred ccccccCCCccceeeeeccCcHHHHHHHHHHHHHhhh
Confidence 533 788899653 33358999999999887654
No 95
>PRK10115 protease 2; Provisional
Probab=99.65 E-value=1.4e-14 Score=127.21 Aligned_cols=130 Identities=16% Similarity=0.074 Sum_probs=94.7
Q ss_pred CCccceeEeCCCceEEEE-eC-----CCCCCCcEEEeccCCCCCC---CCCcccccCCCCcEEEEecCCCCCCCCC---C
Q 020067 21 PYSTGILKVSDIHTIYWE-QS-----GNPTGHPVVFLHGGPGGGT---TPSNRRFFDPDFYRIILFDQRGAGKSTP---H 88 (331)
Q Consensus 21 ~~~~~~~~~~~g~~l~~~-~~-----g~~~~~~vl~~HG~~~~~~---~~~~~~~~~~~g~~vi~~D~~G~G~s~~---~ 88 (331)
..+..+++..||.+|.+. .. ...+.|+||++||+.+... +......++++||.|+.++.||-|.=.. .
T Consensus 415 ~~e~v~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~~ 494 (686)
T PRK10115 415 RSEHLWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYE 494 (686)
T ss_pred EEEEEEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHHHH
Confidence 445566788999887752 21 1224588999999776543 4444566788999999999998654331 1
Q ss_pred ---CCCCccchHHHHHHHHHHHHHh--CCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccch
Q 020067 89 ---ACLDQNTTWDLIDDIEKLRQHL--EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLR 150 (331)
Q Consensus 89 ---~~~~~~~~~~~~~~~~~~~~~~--~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~ 150 (331)
......+++|+++.+..+++.= ..+++.+.|.|.||+++..++.++|++++++|...|....
T Consensus 495 ~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D~ 561 (686)
T PRK10115 495 DGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDV 561 (686)
T ss_pred hhhhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchhH
Confidence 0112357778888777777652 3468999999999999999999999999999999886653
No 96
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.65 E-value=4.2e-15 Score=123.46 Aligned_cols=103 Identities=12% Similarity=0.090 Sum_probs=80.5
Q ss_pred CCCcEEEeccCCCCCCC------CCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHh----CCC
Q 020067 44 TGHPVVFLHGGPGGGTT------PSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHL----EIP 113 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~~------~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 113 (331)
.+.|||+++.+-+.... ..+++.++++||.|+++|+++-+.+.. ..+++++++.+.+.++.+ |.+
T Consensus 214 ~~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~r-----~~~ldDYv~~i~~Ald~V~~~tG~~ 288 (560)
T TIGR01839 214 HARPLLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAHR-----EWGLSTYVDALKEAVDAVRAITGSR 288 (560)
T ss_pred CCCcEEEechhhhhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhhc-----CCCHHHHHHHHHHHHHHHHHhcCCC
Confidence 45789999997765443 346777889999999999998766642 356777776666555554 678
Q ss_pred cEEEEEeChhHHHHHH----HHHhCCC-ceeeEEEeccccchh
Q 020067 114 EWQVFGGSWGSTLALA----YSLAHPD-KVTGLVLRGIFLLRK 151 (331)
Q Consensus 114 ~v~lvG~S~Gg~~a~~----~a~~~p~-~v~~li~~~~~~~~~ 151 (331)
++.++|+|+||.++.. +++++++ +|+.++++.++....
T Consensus 289 ~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~ 331 (560)
T TIGR01839 289 DLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDST 331 (560)
T ss_pred CeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccC
Confidence 9999999999999997 7888886 799999998877643
No 97
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.64 E-value=1.5e-15 Score=109.23 Aligned_cols=257 Identities=14% Similarity=0.053 Sum_probs=146.6
Q ss_pred ceeEeCCCceEEEEeCCCCC-CCcEEEeccCCC--CCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCC-CccchHHHH
Q 020067 25 GILKVSDIHTIYWEQSGNPT-GHPVVFLHGGPG--GGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACL-DQNTTWDLI 100 (331)
Q Consensus 25 ~~~~~~~g~~l~~~~~g~~~-~~~vl~~HG~~~--~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~-~~~~~~~~~ 100 (331)
..+...||..+....+...+ .+-.|++.|..+ ...+..++....++||.|+.+|+||.|.|...... ..+.+.|++
T Consensus 8 ~~l~~~DG~~l~~~~~pA~~~~~g~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~DwA 87 (281)
T COG4757 8 AHLPAPDGYSLPGQRFPADGKASGRLVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLDWA 87 (281)
T ss_pred cccccCCCccCccccccCCCCCCCcEEecccCCcchhHhHHHHHHhhccCceEEEEecccccCCCccccccCccchhhhh
Confidence 45677788777666555322 232455556433 34456677888889999999999999999865421 235555654
Q ss_pred H-HHHHHHHHh----CCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHh-hh
Q 020067 101 D-DIEKLRQHL----EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWES-FR 174 (331)
Q Consensus 101 ~-~~~~~~~~~----~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 174 (331)
. |+...++.+ ...+...||||+||.+.-.+. +++ +..+....+........ +... ..+.. ..
T Consensus 88 ~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~gL~~-~~~-k~~a~~vfG~gagwsg~---m~~~-------~~l~~~~l 155 (281)
T COG4757 88 RLDFPAALAALKKALPGHPLYFVGHSFGGQALGLLG-QHP-KYAAFAVFGSGAGWSGW---MGLR-------ERLGAVLL 155 (281)
T ss_pred hcchHHHHHHHHhhCCCCceEEeeccccceeecccc-cCc-ccceeeEeccccccccc---hhhh-------hcccceee
Confidence 4 555555544 445899999999998665544 445 55555555543332111 1000 00000 00
Q ss_pred ccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCc
Q 020067 175 DLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSD 254 (331)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (331)
..+.......+...+...+............+.|.+|.........++. .
T Consensus 156 ~~lv~p~lt~w~g~~p~~l~G~G~d~p~~v~RdW~RwcR~p~y~fddp~------------------------------~ 205 (281)
T COG4757 156 WNLVGPPLTFWKGYMPKDLLGLGSDLPGTVMRDWARWCRHPRYYFDDPA------------------------------M 205 (281)
T ss_pred ccccccchhhccccCcHhhcCCCccCcchHHHHHHHHhcCccccccChh------------------------------H
Confidence 0000000111111111111111112223344555555544433333322 2
Q ss_pred chhhhhccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEE--EecC----CCCCCCcCCchhHHHHHHHHHH
Q 020067 255 SFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFK--VVAD----AGHSANEPGIAAELVATNEKLK 324 (331)
Q Consensus 255 ~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~--~~~~----~gH~~~~~~~~~~~~~~i~~fl 324 (331)
....+...++ .+||+.+...+|+.+|+...+.+.+.++|+.+. .++. -||+-..-+..|.+.+.+.+|+
T Consensus 206 ~~~~q~yaaV-rtPi~~~~~~DD~w~P~As~d~f~~~y~nApl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 206 RNYRQVYAAV-RTPITFSRALDDPWAPPASRDAFASFYRNAPLEMRDLPRAEGPLGHMGYFREPFEALWKEMLGWF 280 (281)
T ss_pred hHHHHHHHHh-cCceeeeccCCCCcCCHHHHHHHHHhhhcCcccceecCcccCcccchhhhccchHHHHHHHHHhh
Confidence 2244566677 599999999999999999999999998876544 4443 4898876652377887777765
No 98
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.62 E-value=3e-14 Score=109.78 Aligned_cols=121 Identities=21% Similarity=0.260 Sum_probs=95.9
Q ss_pred CCceEEEEeCCCCC------CCcEEEeccCCCCCC-CCCcccccCC---------CCcEEEEecCCCCCCCCCCCCCCcc
Q 020067 31 DIHTIYWEQSGNPT------GHPVVFLHGGPGGGT-TPSNRRFFDP---------DFYRIILFDQRGAGKSTPHACLDQN 94 (331)
Q Consensus 31 ~g~~l~~~~~g~~~------~~~vl~~HG~~~~~~-~~~~~~~~~~---------~g~~vi~~D~~G~G~s~~~~~~~~~ 94 (331)
.|.++||....++. -.|++++|||+|+-. ++..+..+.. --|.||+|.+||+|.|+.+.. ...
T Consensus 132 eGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk-~GF 210 (469)
T KOG2565|consen 132 EGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSK-TGF 210 (469)
T ss_pred cceeEEEEEecCCccccCCcccceEEecCCCchHHHHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCcc-CCc
Confidence 46688887654431 137999999999844 3444444432 238899999999999998775 467
Q ss_pred chHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhh
Q 020067 95 TTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKK 152 (331)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~ 152 (331)
+....|..+..++=++|..++.+-|-.||..++..+|..+|++|.|+-+-.+...++.
T Consensus 211 n~~a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlasLyPenV~GlHlnm~~~~s~~ 268 (469)
T KOG2565|consen 211 NAAATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASLYPENVLGLHLNMCFVNSPF 268 (469)
T ss_pred cHHHHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHhhcchhhhHhhhcccccCCcH
Confidence 7888899999999999999999999999999999999999999999887766555443
No 99
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.62 E-value=3.7e-14 Score=104.72 Aligned_cols=230 Identities=18% Similarity=0.161 Sum_probs=139.1
Q ss_pred ceeEeCCCceEEEEeCC----CCCCCcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCC----CC-C-----
Q 020067 25 GILKVSDIHTIYWEQSG----NPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTP----HA-C----- 90 (331)
Q Consensus 25 ~~~~~~~g~~l~~~~~g----~~~~~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~----~~-~----- 90 (331)
-+++.-+|.+|.-+-.- ...-|.||-.||.+++...+.-...+...||.|+.+|.||.|.|.. ++ +
T Consensus 59 vTf~g~~g~rI~gwlvlP~~~~~~~P~vV~fhGY~g~~g~~~~~l~wa~~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG 138 (321)
T COG3458 59 VTFTGYGGARIKGWLVLPRHEKGKLPAVVQFHGYGGRGGEWHDMLHWAVAGYAVFVMDVRGQGSSSQDTADPPGGPSDPG 138 (321)
T ss_pred EEEeccCCceEEEEEEeecccCCccceEEEEeeccCCCCCccccccccccceeEEEEecccCCCccccCCCCCCCCcCCc
Confidence 34555667677654322 2245789999997666555555556667899999999999998832 11 0
Q ss_pred ---------CCccchHHHHHHHHHHHHH------hCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhh
Q 020067 91 ---------LDQNTTWDLIDDIEKLRQH------LEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEID 155 (331)
Q Consensus 91 ---------~~~~~~~~~~~~~~~~~~~------~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~ 155 (331)
...+-+.....|+..+++. .+.++|.+.|.|.||.+++.+++..| ++++++..-|.......
T Consensus 139 ~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik~~~~~~Pfl~df~r-- 215 (321)
T COG3458 139 FMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIKAVVADYPFLSDFPR-- 215 (321)
T ss_pred eeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhhcccccccccccchh--
Confidence 0112223334444444433 35579999999999999999999887 79999888775542110
Q ss_pred hHhhcccccCChhhHHhhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHH
Q 020067 156 WFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSL 235 (331)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (331)
.+ ..........+ ..+.+..... -..
T Consensus 216 -------------~i----~~~~~~~ydei-~~y~k~h~~~------------------------------------e~~ 241 (321)
T COG3458 216 -------------AI----ELATEGPYDEI-QTYFKRHDPK------------------------------------EAE 241 (321)
T ss_pred -------------he----eecccCcHHHH-HHHHHhcCch------------------------------------HHH
Confidence 00 00000000000 0010000000 001
Q ss_pred HHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCCCccCCcchHHHHHhCC-CCcEEEecCCCCCCCcCCchh
Q 020067 236 AFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWP-EADFKVVADAGHSANEPGIAA 314 (331)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~~~~ 314 (331)
.+..+. ..+......++ ++|+|+..|--|++|||...-.+.+.++ .+++.+++.-+|.-...
T Consensus 242 v~~TL~------------yfD~~n~A~Ri-K~pvL~svgL~D~vcpPstqFA~yN~l~~~K~i~iy~~~aHe~~p~---- 304 (321)
T COG3458 242 VFETLS------------YFDIVNLAARI-KVPVLMSVGLMDPVCPPSTQFAAYNALTTSKTIEIYPYFAHEGGPG---- 304 (321)
T ss_pred HHHHHh------------hhhhhhHHHhh-ccceEEeecccCCCCCChhhHHHhhcccCCceEEEeeccccccCcc----
Confidence 111110 33455567778 5999999999999999999999999986 46677788777876433
Q ss_pred HHHHHHHHHHHhhh
Q 020067 315 ELVATNEKLKNLIK 328 (331)
Q Consensus 315 ~~~~~i~~fl~~~~ 328 (331)
-..+.+..|++.+.
T Consensus 305 ~~~~~~~~~l~~l~ 318 (321)
T COG3458 305 FQSRQQVHFLKILF 318 (321)
T ss_pred hhHHHHHHHHHhhc
Confidence 23445566666543
No 100
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.62 E-value=3.8e-15 Score=114.08 Aligned_cols=109 Identities=19% Similarity=0.240 Sum_probs=61.1
Q ss_pred eEEEEeCCCCCCCcEEEeccCCCCCCC----CCcccccCCCCcEEEEecCC----CCCCCCCCCCCCccchHHHHHHHHH
Q 020067 34 TIYWEQSGNPTGHPVVFLHGGPGGGTT----PSNRRFFDPDFYRIILFDQR----GAGKSTPHACLDQNTTWDLIDDIEK 105 (331)
Q Consensus 34 ~l~~~~~g~~~~~~vl~~HG~~~~~~~----~~~~~~~~~~g~~vi~~D~~----G~G~s~~~~~~~~~~~~~~~~~~~~ 105 (331)
.+.|..........||||.|.+.+-.. ..++..+...+|.|+-+-++ |+|.+ +++.-++||.+
T Consensus 22 afe~~~~~~~~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~---------SL~~D~~eI~~ 92 (303)
T PF08538_consen 22 AFEFTSSSSSAPNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTS---------SLDRDVEEIAQ 92 (303)
T ss_dssp EEEEEEE-TTSSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S-----------HHHHHHHHHH
T ss_pred EEEecCCCCCCCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcc---------hhhhHHHHHHH
Confidence 344444333345579999996554322 34455555679999999876 44544 34444555555
Q ss_pred HHHHh--------CCCcEEEEEeChhHHHHHHHHHhCC-----CceeeEEEeccccchh
Q 020067 106 LRQHL--------EIPEWQVFGGSWGSTLALAYSLAHP-----DKVTGLVLRGIFLLRK 151 (331)
Q Consensus 106 ~~~~~--------~~~~v~lvG~S~Gg~~a~~~a~~~p-----~~v~~li~~~~~~~~~ 151 (331)
+++.+ +.++|+|+|||.|+.-+++|+.... ..|+|+|+-+|.....
T Consensus 93 ~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDRE 151 (303)
T PF08538_consen 93 LVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDRE 151 (303)
T ss_dssp HHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TT
T ss_pred HHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChh
Confidence 44432 3568999999999999999998752 5799999999977654
No 101
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.59 E-value=6.7e-14 Score=101.81 Aligned_cols=237 Identities=9% Similarity=0.086 Sum_probs=122.6
Q ss_pred cceeEeCCCceEEEEeCCCC-----CCCcEEEeccCCCC-CCCCCcccccCCCCcEEEEecCCCC-CCCCCCCCCCccch
Q 020067 24 TGILKVSDIHTIYWEQSGNP-----TGHPVVFLHGGPGG-GTTPSNRRFFDPDFYRIILFDQRGA-GKSTPHACLDQNTT 96 (331)
Q Consensus 24 ~~~~~~~~g~~l~~~~~g~~-----~~~~vl~~HG~~~~-~~~~~~~~~~~~~g~~vi~~D~~G~-G~s~~~~~~~~~~~ 96 (331)
.+.+.+.+|.+|+.++.-|. ..++||+.+|++.. ..+..++.++...||+|+.||.-.| |.|++.- ..+++
T Consensus 4 dhvi~~~~~~~I~vwet~P~~~~~~~~~tiliA~Gf~rrmdh~agLA~YL~~NGFhViRyDsl~HvGlSsG~I--~eftm 81 (294)
T PF02273_consen 4 DHVIRLEDGRQIRVWETRPKNNEPKRNNTILIAPGFARRMDHFAGLAEYLSANGFHVIRYDSLNHVGLSSGDI--NEFTM 81 (294)
T ss_dssp EEEEEETTTEEEEEEEE---TTS---S-EEEEE-TT-GGGGGGHHHHHHHHTTT--EEEE---B---------------H
T ss_pred cceeEcCCCCEEEEeccCCCCCCcccCCeEEEecchhHHHHHHHHHHHHHhhCCeEEEeccccccccCCCCCh--hhcch
Confidence 46788999999999877543 23679999998765 4456788888899999999998875 8888765 57888
Q ss_pred HHHHHHHHHHHHHh---CCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhh
Q 020067 97 WDLIDDIEKLRQHL---EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESF 173 (331)
Q Consensus 97 ~~~~~~~~~~~~~~---~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (331)
....+++..+++++ |..++.|+.-|+.|-+|+..|.+- .+.-+|..-+.......+............
T Consensus 82 s~g~~sL~~V~dwl~~~g~~~~GLIAaSLSaRIAy~Va~~i--~lsfLitaVGVVnlr~TLe~al~~Dyl~~~------- 152 (294)
T PF02273_consen 82 SIGKASLLTVIDWLATRGIRRIGLIAASLSARIAYEVAADI--NLSFLITAVGVVNLRDTLEKALGYDYLQLP------- 152 (294)
T ss_dssp HHHHHHHHHHHHHHHHTT---EEEEEETTHHHHHHHHTTTS----SEEEEES--S-HHHHHHHHHSS-GGGS--------
T ss_pred HHhHHHHHHHHHHHHhcCCCcchhhhhhhhHHHHHHHhhcc--CcceEEEEeeeeeHHHHHHHHhccchhhcc-------
Confidence 88888888887776 677899999999999999999854 477777766665544333322221100000
Q ss_pred hccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCC
Q 020067 174 RDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPS 253 (331)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (331)
...+...+...... .....|...+-. .++..
T Consensus 153 ------------i~~lp~dldfeGh~----------------------------l~~~vFv~dc~e--------~~w~~- 183 (294)
T PF02273_consen 153 ------------IEQLPEDLDFEGHN----------------------------LGAEVFVTDCFE--------HGWDD- 183 (294)
T ss_dssp ------------GGG--SEEEETTEE----------------------------EEHHHHHHHHHH--------TT-SS-
T ss_pred ------------hhhCCCcccccccc----------------------------cchHHHHHHHHH--------cCCcc-
Confidence 00000000000000 000000000000 00000
Q ss_pred cchhhhhccccccccEEEEecCCCCccCCcchHHHHHhC--CCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhh
Q 020067 254 DSFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAW--PEADFKVVADAGHSANEPGIAAELVATNEKLKNLI 327 (331)
Q Consensus 254 ~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 327 (331)
.......++.+ ++|++.+++.+|.+|......++.+.+ +..++..++|++|-+... ...+++|.+++
T Consensus 184 l~ST~~~~k~l-~iP~iaF~A~~D~WV~q~eV~~~~~~~~s~~~klysl~Gs~HdL~en------l~vlrnfy~sv 252 (294)
T PF02273_consen 184 LDSTINDMKRL-SIPFIAFTANDDDWVKQSEVEELLDNINSNKCKLYSLPGSSHDLGEN------LVVLRNFYQSV 252 (294)
T ss_dssp HHHHHHHHTT---S-EEEEEETT-TTS-HHHHHHHHTT-TT--EEEEEETT-SS-TTSS------HHHHHHHHHHH
T ss_pred chhHHHHHhhC-CCCEEEEEeCCCccccHHHHHHHHHhcCCCceeEEEecCccchhhhC------hHHHHHHHHHH
Confidence 12234567777 699999999999999988888888866 457888899999987543 33555565554
No 102
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.56 E-value=1.7e-13 Score=99.66 Aligned_cols=88 Identities=17% Similarity=0.146 Sum_probs=64.0
Q ss_pred EEEeccCCCCCCCCC---cccccCCC--CcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCcEEEEEeCh
Q 020067 48 VVFLHGGPGGGTTPS---NRRFFDPD--FYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSW 122 (331)
Q Consensus 48 vl~~HG~~~~~~~~~---~~~~~~~~--g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG~S~ 122 (331)
||++||+.++..... ....+.+. ...++.+|++ .......+.+.++++....+.+.|+|.||
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~-------------~~p~~a~~~l~~~i~~~~~~~~~liGSSl 68 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLP-------------PFPEEAIAQLEQLIEELKPENVVLIGSSL 68 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCC-------------cCHHHHHHHHHHHHHhCCCCCeEEEEECh
Confidence 799999877655422 22223222 3566777765 24566778888899988877899999999
Q ss_pred hHHHHHHHHHhCCCceeeEEEeccccchh
Q 020067 123 GSTLALAYSLAHPDKVTGLVLRGIFLLRK 151 (331)
Q Consensus 123 Gg~~a~~~a~~~p~~v~~li~~~~~~~~~ 151 (331)
||..|..+|.+++ +++ |+++|...+.
T Consensus 69 GG~~A~~La~~~~--~~a-vLiNPav~p~ 94 (187)
T PF05728_consen 69 GGFYATYLAERYG--LPA-VLINPAVRPY 94 (187)
T ss_pred HHHHHHHHHHHhC--CCE-EEEcCCCCHH
Confidence 9999999999985 333 8899877653
No 103
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=99.55 E-value=2.7e-12 Score=107.49 Aligned_cols=132 Identities=18% Similarity=0.203 Sum_probs=89.8
Q ss_pred CCCccceeEeCC---CceEEEEeCC----CCCCCcEEEeccCCCCCCCCCccc------------cc------CCCCcEE
Q 020067 20 EPYSTGILKVSD---IHTIYWEQSG----NPTGHPVVFLHGGPGGGTTPSNRR------------FF------DPDFYRI 74 (331)
Q Consensus 20 ~~~~~~~~~~~~---g~~l~~~~~g----~~~~~~vl~~HG~~~~~~~~~~~~------------~~------~~~g~~v 74 (331)
......++++.+ +..++|+-.. +.+.|+||+++||+|.+....... .+ -.+...+
T Consensus 45 ~~~~sGy~~v~~~~~~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~~~~ 124 (462)
T PTZ00472 45 VNQWSGYFDIPGNQTDKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNNEAYV 124 (462)
T ss_pred CcceeEEEEeCCCCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCcccccccCe
Confidence 344567888854 5578877554 235688999999988654321100 01 1245789
Q ss_pred EEecCC-CCCCCCCCCCCCccchHHHHHHHHHHHHHh-------CCCcEEEEEeChhHHHHHHHHHhC----------CC
Q 020067 75 ILFDQR-GAGKSTPHACLDQNTTWDLIDDIEKLRQHL-------EIPEWQVFGGSWGSTLALAYSLAH----------PD 136 (331)
Q Consensus 75 i~~D~~-G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~v~lvG~S~Gg~~a~~~a~~~----------p~ 136 (331)
+.+|.| |+|.|.........+.++.++|+.++++.+ +..+++|+|||+||..+..+|..- +-
T Consensus 125 l~iDqP~G~G~S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~i 204 (462)
T PTZ00472 125 IYVDQPAGVGFSYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYI 204 (462)
T ss_pred EEEeCCCCcCcccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCcee
Confidence 999975 888887543223455678888888887743 447899999999999998887652 12
Q ss_pred ceeeEEEeccccchh
Q 020067 137 KVTGLVLRGIFLLRK 151 (331)
Q Consensus 137 ~v~~li~~~~~~~~~ 151 (331)
.++|+++.++...+.
T Consensus 205 nLkGi~IGNg~~dp~ 219 (462)
T PTZ00472 205 NLAGLAVGNGLTDPY 219 (462)
T ss_pred eeEEEEEeccccChh
Confidence 478999988876543
No 104
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.50 E-value=2.9e-13 Score=105.29 Aligned_cols=105 Identities=18% Similarity=0.128 Sum_probs=82.0
Q ss_pred CCcEEEeccCCCCCCC-CCcccccC---CCCcEEEEecCCCCCCCCCCC----CCCccchHHHHHHHHHHHHHhC-----
Q 020067 45 GHPVVFLHGGPGGGTT-PSNRRFFD---PDFYRIILFDQRGAGKSTPHA----CLDQNTTWDLIDDIEKLRQHLE----- 111 (331)
Q Consensus 45 ~~~vl~~HG~~~~~~~-~~~~~~~~---~~g~~vi~~D~~G~G~s~~~~----~~~~~~~~~~~~~~~~~~~~~~----- 111 (331)
+..+++++|.+|-..+ ..+...+. ...+.|++..+.||-.++... ....++++++++...++++.+-
T Consensus 2 ~~li~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~~ 81 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKNK 81 (266)
T ss_pred cEEEEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhcC
Confidence 3568999999987444 33433333 568999999999998777551 2356889988888777776652
Q ss_pred -CCcEEEEEeChhHHHHHHHHHhCC---CceeeEEEeccccc
Q 020067 112 -IPEWQVFGGSWGSTLALAYSLAHP---DKVTGLVLRGIFLL 149 (331)
Q Consensus 112 -~~~v~lvG~S~Gg~~a~~~a~~~p---~~v~~li~~~~~~~ 149 (331)
..+++++|||.|++++++.+.+.+ .+|.+++++-|...
T Consensus 82 ~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~ 123 (266)
T PF10230_consen 82 PNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIE 123 (266)
T ss_pred CCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCccc
Confidence 347999999999999999999999 78999999988654
No 105
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.50 E-value=4e-13 Score=118.80 Aligned_cols=84 Identities=13% Similarity=0.167 Sum_probs=65.5
Q ss_pred cccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhC--------------------CCcEEEEEeCh
Q 020067 63 NRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLE--------------------IPEWQVFGGSW 122 (331)
Q Consensus 63 ~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~v~lvG~S~ 122 (331)
....++++||.|+..|.||+|.|++.... . -.+-.+|..++++.+. ..+|.++|.|+
T Consensus 271 ~~~~~~~rGYaVV~~D~RGtg~SeG~~~~--~-~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY 347 (767)
T PRK05371 271 LNDYFLPRGFAVVYVSGIGTRGSDGCPTT--G-DYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSY 347 (767)
T ss_pred HHHHHHhCCeEEEEEcCCCCCCCCCcCcc--C-CHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcH
Confidence 34556779999999999999999876421 1 1344556666666654 35899999999
Q ss_pred hHHHHHHHHHhCCCceeeEEEeccccc
Q 020067 123 GSTLALAYSLAHPDKVTGLVLRGIFLL 149 (331)
Q Consensus 123 Gg~~a~~~a~~~p~~v~~li~~~~~~~ 149 (331)
||.+++.+|...|..++++|..++...
T Consensus 348 ~G~~~~~aAa~~pp~LkAIVp~a~is~ 374 (767)
T PRK05371 348 LGTLPNAVATTGVEGLETIIPEAAISS 374 (767)
T ss_pred HHHHHHHHHhhCCCcceEEEeeCCCCc
Confidence 999999999998889999999887654
No 106
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=99.49 E-value=5.2e-13 Score=105.45 Aligned_cols=106 Identities=15% Similarity=0.067 Sum_probs=84.0
Q ss_pred CCcEEEeccCCCCCCCC------CcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCcEEEE
Q 020067 45 GHPVVFLHGGPGGGTTP------SNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVF 118 (331)
Q Consensus 45 ~~~vl~~HG~~~~~~~~------~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lv 118 (331)
++|++++|-+.+....+ ..+..++++|+.|+.+++++=..+.......+|-.+.+.+.+..+.+..+.++|.++
T Consensus 107 ~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~~~~~edYi~e~l~~aid~v~~itg~~~Inli 186 (445)
T COG3243 107 KRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLAAKNLEDYILEGLSEAIDTVKDITGQKDINLI 186 (445)
T ss_pred CCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhhhccHHHHHHHHHHHHHHHHHHHhCcccccee
Confidence 56899999987765543 355567789999999999987766654433445556666777777888888999999
Q ss_pred EeChhHHHHHHHHHhCCCc-eeeEEEeccccch
Q 020067 119 GGSWGSTLALAYSLAHPDK-VTGLVLRGIFLLR 150 (331)
Q Consensus 119 G~S~Gg~~a~~~a~~~p~~-v~~li~~~~~~~~ 150 (331)
|+|.||.++..+++.++.+ |+.++++.++...
T Consensus 187 GyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF 219 (445)
T COG3243 187 GYCVGGTLLAAALALMAAKRIKSLTLLTSPVDF 219 (445)
T ss_pred eEecchHHHHHHHHhhhhcccccceeeecchhh
Confidence 9999999999999999887 9999998876654
No 107
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.49 E-value=1.2e-13 Score=106.56 Aligned_cols=100 Identities=16% Similarity=0.191 Sum_probs=76.3
Q ss_pred CcEEEeccCCCCCCCCCcccccCCC-CcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCC-cEEEEEeChh
Q 020067 46 HPVVFLHGGPGGGTTPSNRRFFDPD-FYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIP-EWQVFGGSWG 123 (331)
Q Consensus 46 ~~vl~~HG~~~~~~~~~~~~~~~~~-g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~lvG~S~G 123 (331)
++|+++|+++++...+......+.. .+.|+.++.+|.+.... ...+++++++...+.+.....+ ++.|+|||+|
T Consensus 1 ~~lf~~p~~gG~~~~y~~la~~l~~~~~~v~~i~~~~~~~~~~----~~~si~~la~~y~~~I~~~~~~gp~~L~G~S~G 76 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSYRPLARALPDDVIGVYGIEYPGRGDDEP----PPDSIEELASRYAEAIRARQPEGPYVLAGWSFG 76 (229)
T ss_dssp -EEEEESSTTCSGGGGHHHHHHHTTTEEEEEEECSTTSCTTSH----EESSHHHHHHHHHHHHHHHTSSSSEEEEEETHH
T ss_pred CeEEEEcCCccCHHHHHHHHHhCCCCeEEEEEEecCCCCCCCC----CCCCHHHHHHHHHHHhhhhCCCCCeeehccCcc
Confidence 3699999977775554444444455 49999999999983322 2468999999988877776655 9999999999
Q ss_pred HHHHHHHHHhC---CCceeeEEEeccccc
Q 020067 124 STLALAYSLAH---PDKVTGLVLRGIFLL 149 (331)
Q Consensus 124 g~~a~~~a~~~---p~~v~~li~~~~~~~ 149 (331)
|.+|+.+|.+. ...+..+++++++++
T Consensus 77 g~lA~E~A~~Le~~G~~v~~l~liD~~~p 105 (229)
T PF00975_consen 77 GILAFEMARQLEEAGEEVSRLILIDSPPP 105 (229)
T ss_dssp HHHHHHHHHHHHHTT-SESEEEEESCSST
T ss_pred HHHHHHHHHHHHHhhhccCceEEecCCCC
Confidence 99999999764 446999999997654
No 108
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=99.48 E-value=1.7e-12 Score=90.05 Aligned_cols=173 Identities=19% Similarity=0.125 Sum_probs=116.6
Q ss_pred CcEEEeccCCCCCC--CCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCcEEEEEeChh
Q 020067 46 HPVVFLHGGPGGGT--TPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWG 123 (331)
Q Consensus 46 ~~vl~~HG~~~~~~--~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG~S~G 123 (331)
+.+|++||..+|+. |......-+.. +-.+++. +...-..+++++.+.+.+... .++++||+||+|
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~we~~l~~---a~rveq~---------~w~~P~~~dWi~~l~~~v~a~-~~~~vlVAHSLG 69 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSRWESALPN---ARRVEQD---------DWEAPVLDDWIARLEKEVNAA-EGPVVLVAHSLG 69 (181)
T ss_pred ceEEEecCCCCCChhHHHHHHHhhCcc---chhcccC---------CCCCCCHHHHHHHHHHHHhcc-CCCeEEEEeccc
Confidence 46899999666543 32222221111 2222222 113456889999998888887 367999999999
Q ss_pred HHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhccccCCCchHHHHH
Q 020067 124 STLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYA 203 (331)
Q Consensus 124 g~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (331)
+.++++++.+....|+|+++++|+....... +.. ...
T Consensus 70 c~~v~h~~~~~~~~V~GalLVAppd~~~~~~---------------~~~----------------~~~------------ 106 (181)
T COG3545 70 CATVAHWAEHIQRQVAGALLVAPPDVSRPEI---------------RPK----------------HLM------------ 106 (181)
T ss_pred HHHHHHHHHhhhhccceEEEecCCCcccccc---------------chh----------------hcc------------
Confidence 9999999998877999999999865421100 000 000
Q ss_pred HHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCCCccCCc
Q 020067 204 AARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDVCCPMM 283 (331)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~~~~~~ 283 (331)
..+.. ....+ --|.+++.+++|++++++
T Consensus 107 --------------------------------------------------tf~~~-p~~~l-pfps~vvaSrnDp~~~~~ 134 (181)
T COG3545 107 --------------------------------------------------TFDPI-PREPL-PFPSVVVASRNDPYVSYE 134 (181)
T ss_pred --------------------------------------------------ccCCC-ccccC-CCceeEEEecCCCCCCHH
Confidence 00000 12233 379999999999999999
Q ss_pred chHHHHHhCCCCcEEEecCCCCCCCc---CCchhHHHHHHHHHHHhhh
Q 020067 284 SAWDLHKAWPEADFKVVADAGHSANE---PGIAAELVATNEKLKNLIK 328 (331)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~gH~~~~---~~~~~~~~~~i~~fl~~~~ 328 (331)
.++.+++.. ++.++.+.++||+--. .. ..+....+.+|+.+..
T Consensus 135 ~a~~~a~~w-gs~lv~~g~~GHiN~~sG~g~-wpeg~~~l~~~~s~~~ 180 (181)
T COG3545 135 HAEDLANAW-GSALVDVGEGGHINAESGFGP-WPEGYALLAQLLSRAT 180 (181)
T ss_pred HHHHHHHhc-cHhheecccccccchhhcCCC-cHHHHHHHHHHhhhhc
Confidence 999999988 6888888889998643 33 6677778888877653
No 109
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.48 E-value=2.3e-12 Score=87.41 Aligned_cols=180 Identities=14% Similarity=0.115 Sum_probs=124.8
Q ss_pred cEEEeccCCCCC---CCCCcccccCCCCcEEEEecCCCC-----CCCCCCCCCCccchHHHHHHHHHHHHHhCCCcEEEE
Q 020067 47 PVVFLHGGPGGG---TTPSNRRFFDPDFYRIILFDQRGA-----GKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVF 118 (331)
Q Consensus 47 ~vl~~HG~~~~~---~~~~~~~~~~~~g~~vi~~D~~G~-----G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lv 118 (331)
+||+.||.+.+. .....+..+...|+.|..++++-. |...+++. ...-...+...+.++.+.+...+.++-
T Consensus 16 tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~-~~t~~~~~~~~~aql~~~l~~gpLi~G 94 (213)
T COG3571 16 TILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPG-SGTLNPEYIVAIAQLRAGLAEGPLIIG 94 (213)
T ss_pred EEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCc-cccCCHHHHHHHHHHHhcccCCceeec
Confidence 689999955442 235567778889999999998753 32222221 233455678888888998887899999
Q ss_pred EeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHhhccccCCCch
Q 020067 119 GGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDK 198 (331)
Q Consensus 119 G~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (331)
|+||||-++.+.+..-.-.|+++++++-+..++...
T Consensus 95 GkSmGGR~aSmvade~~A~i~~L~clgYPfhppGKP-------------------------------------------- 130 (213)
T COG3571 95 GKSMGGRVASMVADELQAPIDGLVCLGYPFHPPGKP-------------------------------------------- 130 (213)
T ss_pred cccccchHHHHHHHhhcCCcceEEEecCccCCCCCc--------------------------------------------
Confidence 999999999998887655699999988554332100
Q ss_pred HHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccccccEEEEecCCCC
Q 020067 199 ETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHINATIVQGRYDV 278 (331)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~l~i~G~~D~ 278 (331)
+.-..+.|..+ ++|+||.+|+.|+
T Consensus 131 -------------------------------------------------------e~~Rt~HL~gl-~tPtli~qGtrD~ 154 (213)
T COG3571 131 -------------------------------------------------------EQLRTEHLTGL-KTPTLITQGTRDE 154 (213)
T ss_pred -------------------------------------------------------ccchhhhccCC-CCCeEEeeccccc
Confidence 11123467778 4999999999999
Q ss_pred ccCCcchHHHHHhCCCCcEEEecCCCCCCCcC---------CchhHHHHHHHHHHHhhh
Q 020067 279 CCPMMSAWDLHKAWPEADFKVVADAGHSANEP---------GIAAELVATNEKLKNLIK 328 (331)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~---------~~~~~~~~~i~~fl~~~~ 328 (331)
+-..+.... +...+..+++.++++.|-+-.. +.-....+.|..|++++.
T Consensus 155 fGtr~~Va~-y~ls~~iev~wl~~adHDLkp~k~vsgls~~~hL~~~A~~va~~~~~l~ 212 (213)
T COG3571 155 FGTRDEVAG-YALSDPIEVVWLEDADHDLKPRKLVSGLSTADHLKTLAEQVAGWARRLA 212 (213)
T ss_pred ccCHHHHHh-hhcCCceEEEEeccCccccccccccccccHHHHHHHHHHHHHHHHhhcC
Confidence 876544421 2223678999999999976321 124556677777877653
No 110
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=99.47 E-value=1.8e-13 Score=98.40 Aligned_cols=180 Identities=14% Similarity=0.098 Sum_probs=119.0
Q ss_pred CCCCCCC-cEEEecc-CCCCCC-CCCcccccCCCCcEEEEecCC-CCCCCCCCCC------CCccchHHHHHHHHHHHHH
Q 020067 40 SGNPTGH-PVVFLHG-GPGGGT-TPSNRRFFDPDFYRIILFDQR-GAGKSTPHAC------LDQNTTWDLIDDIEKLRQH 109 (331)
Q Consensus 40 ~g~~~~~-~vl~~HG-~~~~~~-~~~~~~~~~~~g~~vi~~D~~-G~G~s~~~~~------~~~~~~~~~~~~~~~~~~~ 109 (331)
.|+.+.+ .||++-- ++-+.. ....+..++..||.|++||+. |--.|...+. ....+....-.++..+++.
T Consensus 33 ~gs~~~~~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~ 112 (242)
T KOG3043|consen 33 VGSTSSKKVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKW 112 (242)
T ss_pred ecCCCCCeEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHH
Confidence 3543444 6777777 443332 466777777899999999975 3222221110 0112333334445555444
Q ss_pred h---C-CCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhh
Q 020067 110 L---E-IPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCF 185 (331)
Q Consensus 110 ~---~-~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (331)
+ + ..+|.++|+||||.++..+....| .+.+++..-|....
T Consensus 113 lk~~g~~kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~hps~~d----------------------------------- 156 (242)
T KOG3043|consen 113 LKNHGDSKKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFHPSFVD----------------------------------- 156 (242)
T ss_pred HHHcCCcceeeEEEEeecceEEEEeeccch-hheeeeEecCCcCC-----------------------------------
Confidence 4 4 568999999999999998888887 57666665543211
Q ss_pred HHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccc
Q 020067 186 VDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIR 265 (331)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 265 (331)
.+.+.++
T Consensus 157 ------------------------------------------------------------------------~~D~~~v- 163 (242)
T KOG3043|consen 157 ------------------------------------------------------------------------SADIANV- 163 (242)
T ss_pred ------------------------------------------------------------------------hhHHhcC-
Confidence 1245566
Q ss_pred cccEEEEecCCCCccCCcchHHHHHhCC-----CCcEEEecCCCCCCCc----------CCchhHHHHHHHHHHHhhh
Q 020067 266 HINATIVQGRYDVCCPMMSAWDLHKAWP-----EADFKVVADAGHSANE----------PGIAAELVATNEKLKNLIK 328 (331)
Q Consensus 266 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~-----~~~~~~~~~~gH~~~~----------~~~~~~~~~~i~~fl~~~~ 328 (331)
++|||++.|+.|.++|++....+.+.+. +.++.+++|-+|.+.. ....++..+.+..|++...
T Consensus 164 k~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~~y~ 241 (242)
T KOG3043|consen 164 KAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFVARRANISSPEDKKAAEEAYQRFISWFKHYL 241 (242)
T ss_pred CCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccchhhhhccCCCChhHHHHHHHHHHHHHHHHHHhh
Confidence 5999999999999999998888888773 2469999999998752 1235667777777777653
No 111
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=99.45 E-value=1e-12 Score=93.41 Aligned_cols=96 Identities=16% Similarity=0.068 Sum_probs=73.2
Q ss_pred cEEEecc-CCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHH----HhCCCcEEEEEeC
Q 020067 47 PVVFLHG-GPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQ----HLEIPEWQVFGGS 121 (331)
Q Consensus 47 ~vl~~HG-~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~v~lvG~S 121 (331)
.+||+.| ++...........+.++|+.|+.+|-+-|=.+.+ +.++.+.|+..+++ +.+.++++|+|+|
T Consensus 4 ~~v~~SGDgGw~~~d~~~a~~l~~~G~~VvGvdsl~Yfw~~r-------tP~~~a~Dl~~~i~~y~~~w~~~~vvLiGYS 76 (192)
T PF06057_consen 4 LAVFFSGDGGWRDLDKQIAEALAKQGVPVVGVDSLRYFWSER-------TPEQTAADLARIIRHYRARWGRKRVVLIGYS 76 (192)
T ss_pred EEEEEeCCCCchhhhHHHHHHHHHCCCeEEEechHHHHhhhC-------CHHHHHHHHHHHHHHHHHHhCCceEEEEeec
Confidence 4788888 5555555778888989999999999776655543 44556666666655 4577899999999
Q ss_pred hhHHHHHHHHHhCCC----ceeeEEEeccccc
Q 020067 122 WGSTLALAYSLAHPD----KVTGLVLRGIFLL 149 (331)
Q Consensus 122 ~Gg~~a~~~a~~~p~----~v~~li~~~~~~~ 149 (331)
+|+-+......+.|. +|+.++++++...
T Consensus 77 FGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~~ 108 (192)
T PF06057_consen 77 FGADVLPFIYNRLPAALRARVAQVVLLSPSTT 108 (192)
T ss_pred CCchhHHHHHhhCCHHHHhheeEEEEeccCCc
Confidence 999888888877764 7999999998543
No 112
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.42 E-value=4.7e-13 Score=116.34 Aligned_cols=109 Identities=17% Similarity=0.133 Sum_probs=81.2
Q ss_pred eeEeCCCceEEEEeCCCC---------CCCcEEEeccCCCC-CCCCCcccccCCCCcEEEEecCCCCCCCCCC-------
Q 020067 26 ILKVSDIHTIYWEQSGNP---------TGHPVVFLHGGPGG-GTTPSNRRFFDPDFYRIILFDQRGAGKSTPH------- 88 (331)
Q Consensus 26 ~~~~~~g~~l~~~~~g~~---------~~~~vl~~HG~~~~-~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~------- 88 (331)
.+...++.++.|...|.. ..|+||++||+.++ ..|..++..+.++||+|+++|+||||.|...
T Consensus 421 ~~~~p~~~~i~~~~~~~g~~~~~~p~~g~P~VVllHG~~g~~~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~ 500 (792)
T TIGR03502 421 LLTTPNGPVIAAFRAGTGLETFAAPTDGWPVVIYQHGITGAKENALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVN 500 (792)
T ss_pred EEEecCcchhhhhhcccccccccCCCCCCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEeCCCCCCcccccccccccc
Confidence 455567767777765421 12579999997665 4466677777778999999999999999433
Q ss_pred ---CCCC-----------ccchHHHHHHHHHHHHHhC----------------CCcEEEEEeChhHHHHHHHHHhC
Q 020067 89 ---ACLD-----------QNTTWDLIDDIEKLRQHLE----------------IPEWQVFGGSWGSTLALAYSLAH 134 (331)
Q Consensus 89 ---~~~~-----------~~~~~~~~~~~~~~~~~~~----------------~~~v~lvG~S~Gg~~a~~~a~~~ 134 (331)
.... ..++++.+.|+..++..+. ..+++++||||||.++..++...
T Consensus 501 a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~a 576 (792)
T TIGR03502 501 ATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAYA 576 (792)
T ss_pred ccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHhc
Confidence 1111 1267889999998887776 34899999999999999999753
No 113
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.41 E-value=2.1e-13 Score=103.76 Aligned_cols=96 Identities=22% Similarity=0.223 Sum_probs=63.6
Q ss_pred EEEeccCCCCC---C-CCCcccccCC-CCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHH-----hCCCcEEE
Q 020067 48 VVFLHGGPGGG---T-TPSNRRFFDP-DFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQH-----LEIPEWQV 117 (331)
Q Consensus 48 vl~~HG~~~~~---~-~~~~~~~~~~-~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~v~l 117 (331)
||++|||+... . .+.....+++ .|+.|+.+|+|=..... ....++|..+.+..+++. .+.++|++
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p~~~-----~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l 75 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAPEAP-----FPAALEDVKAAYRWLLKNADKLGIDPERIVL 75 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TTTSS-----TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeecccccccc-----ccccccccccceeeeccccccccccccceEE
Confidence 79999976432 2 2334455554 89999999999542221 234556666666666666 45568999
Q ss_pred EEeChhHHHHHHHHHhCCC----ceeeEEEecccc
Q 020067 118 FGGSWGSTLALAYSLAHPD----KVTGLVLRGIFL 148 (331)
Q Consensus 118 vG~S~Gg~~a~~~a~~~p~----~v~~li~~~~~~ 148 (331)
+|+|.||.+++.++....+ .++++++++|..
T Consensus 76 ~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~ 110 (211)
T PF07859_consen 76 IGDSAGGHLALSLALRARDRGLPKPKGIILISPWT 110 (211)
T ss_dssp EEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHS
T ss_pred eecccccchhhhhhhhhhhhcccchhhhhcccccc
Confidence 9999999999999976432 489999999854
No 114
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.40 E-value=1.8e-13 Score=84.56 Aligned_cols=76 Identities=21% Similarity=0.347 Sum_probs=61.2
Q ss_pred CceEEEEeCCCCC--CCcEEEeccCCC-CCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHH
Q 020067 32 IHTIYWEQSGNPT--GHPVVFLHGGPG-GGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQ 108 (331)
Q Consensus 32 g~~l~~~~~g~~~--~~~vl~~HG~~~-~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~ 108 (331)
|.+|+|+.+.+++ +.+|+++||... +..+..++..+.++||.|+++|+||||.|..... ...+++++++|+..+++
T Consensus 1 G~~L~~~~w~p~~~~k~~v~i~HG~~eh~~ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg-~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 1 GTKLFYRRWKPENPPKAVVVIVHGFGEHSGRYAHLAEFLAEQGYAVFAYDHRGHGRSEGKRG-HIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred CcEEEEEEecCCCCCCEEEEEeCCcHHHHHHHHHHHHHHHhCCCEEEEECCCcCCCCCCccc-ccCCHHHHHHHHHHHhC
Confidence 4578888887654 347999999654 5667888999999999999999999999986553 34688999999988763
No 115
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.40 E-value=6.9e-12 Score=98.92 Aligned_cols=117 Identities=16% Similarity=0.081 Sum_probs=74.9
Q ss_pred CCceEEEEeC-----CCCCCCcEEEeccCCCCCCC----C-Cccc------ccCCCCcEEEEecCCCCCCCCCCCCCCcc
Q 020067 31 DIHTIYWEQS-----GNPTGHPVVFLHGGPGGGTT----P-SNRR------FFDPDFYRIILFDQRGAGKSTPHACLDQN 94 (331)
Q Consensus 31 ~g~~l~~~~~-----g~~~~~~vl~~HG~~~~~~~----~-~~~~------~~~~~g~~vi~~D~~G~G~s~~~~~~~~~ 94 (331)
||.+|+...+ +...-|+||..|+.+.+... . .... .++++||.||..|.||.|.|.......
T Consensus 1 DGv~L~adv~~P~~~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~-- 78 (272)
T PF02129_consen 1 DGVRLAADVYRPGADGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPM-- 78 (272)
T ss_dssp TS-EEEEEEEEE--TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TT--
T ss_pred CCCEEEEEEEecCCCCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccC--
Confidence 4556654333 22233678888886643211 1 1111 277899999999999999999766321
Q ss_pred chHHHHHHHHHHHHHhC-----CCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccch
Q 020067 95 TTWDLIDDIEKLRQHLE-----IPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLR 150 (331)
Q Consensus 95 ~~~~~~~~~~~~~~~~~-----~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~ 150 (331)
...-++|..++++.+. ..+|.++|.|++|..++.+|+..|..+++++...+....
T Consensus 79 -~~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~ 138 (272)
T PF02129_consen 79 -SPNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDL 138 (272)
T ss_dssp -SHHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBT
T ss_pred -ChhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCcc
Confidence 4455666666666552 238999999999999999999888899999988775543
No 116
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.37 E-value=2.2e-11 Score=91.90 Aligned_cols=100 Identities=20% Similarity=0.165 Sum_probs=71.4
Q ss_pred CCCcEEEeccCCCC-CCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHh----------CC
Q 020067 44 TGHPVVFLHGGPGG-GTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHL----------EI 112 (331)
Q Consensus 44 ~~~~vl~~HG~~~~-~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~----------~~ 112 (331)
+=|+|||+||+... ..+..+...+++.||-|+++|+...+.... ....+...+-+..+.+.+ +.
T Consensus 16 ~yPVv~f~~G~~~~~s~Ys~ll~hvAShGyIVV~~d~~~~~~~~~-----~~~~~~~~~vi~Wl~~~L~~~l~~~v~~D~ 90 (259)
T PF12740_consen 16 TYPVVLFLHGFLLINSWYSQLLEHVASHGYIVVAPDLYSIGGPDD-----TDEVASAAEVIDWLAKGLESKLPLGVKPDF 90 (259)
T ss_pred CcCEEEEeCCcCCCHHHHHHHHHHHHhCceEEEEecccccCCCCc-----chhHHHHHHHHHHHHhcchhhccccccccc
Confidence 56889999996643 445678888889999999999766443221 112333333333322211 44
Q ss_pred CcEEEEEeChhHHHHHHHHHhC-----CCceeeEEEecccc
Q 020067 113 PEWQVFGGSWGSTLALAYSLAH-----PDKVTGLVLRGIFL 148 (331)
Q Consensus 113 ~~v~lvG~S~Gg~~a~~~a~~~-----p~~v~~li~~~~~~ 148 (331)
.++.|.|||-||-++..++..+ +.+++++|+++|..
T Consensus 91 s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 91 SKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVD 131 (259)
T ss_pred cceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEecccc
Confidence 5899999999999999999987 56899999999965
No 117
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.36 E-value=1.7e-11 Score=117.75 Aligned_cols=101 Identities=14% Similarity=0.068 Sum_probs=81.8
Q ss_pred CCCcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCC-CcEEEEEeCh
Q 020067 44 TGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEI-PEWQVFGGSW 122 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~lvG~S~ 122 (331)
++++++++||++++...|......+..+++|+++|.+|+|.+.. ..++++++++++.+.++.+.. .+++++|||+
T Consensus 1067 ~~~~l~~lh~~~g~~~~~~~l~~~l~~~~~v~~~~~~g~~~~~~----~~~~l~~la~~~~~~i~~~~~~~p~~l~G~S~ 1142 (1296)
T PRK10252 1067 DGPTLFCFHPASGFAWQFSVLSRYLDPQWSIYGIQSPRPDGPMQ----TATSLDEVCEAHLATLLEQQPHGPYHLLGYSL 1142 (1296)
T ss_pred CCCCeEEecCCCCchHHHHHHHHhcCCCCcEEEEECCCCCCCCC----CCCCHHHHHHHHHHHHHhhCCCCCEEEEEech
Confidence 45789999997776555544444557789999999999986632 357899999999999988654 4899999999
Q ss_pred hHHHHHHHHHh---CCCceeeEEEecccc
Q 020067 123 GSTLALAYSLA---HPDKVTGLVLRGIFL 148 (331)
Q Consensus 123 Gg~~a~~~a~~---~p~~v~~li~~~~~~ 148 (331)
||.++..+|.+ .++++..++++++..
T Consensus 1143 Gg~vA~e~A~~l~~~~~~v~~l~l~~~~~ 1171 (1296)
T PRK10252 1143 GGTLAQGIAARLRARGEEVAFLGLLDTWP 1171 (1296)
T ss_pred hhHHHHHHHHHHHHcCCceeEEEEecCCC
Confidence 99999999986 578899999998743
No 118
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=99.35 E-value=7.8e-11 Score=104.22 Aligned_cols=222 Identities=18% Similarity=0.178 Sum_probs=141.9
Q ss_pred cceeEeCCCceEEEEeCCCC------CCCcEEEeccCCCCCCC-----CCccc-ccCCCCcEEEEecCCCCCCCCCC---
Q 020067 24 TGILKVSDIHTIYWEQSGNP------TGHPVVFLHGGPGGGTT-----PSNRR-FFDPDFYRIILFDQRGAGKSTPH--- 88 (331)
Q Consensus 24 ~~~~~~~~g~~l~~~~~g~~------~~~~vl~~HG~~~~~~~-----~~~~~-~~~~~g~~vi~~D~~G~G~s~~~--- 88 (331)
-..+.. +|....+...-|+ +-|.++.+|||+++... -.+.. .....|+.|+.+|.||.|.....
T Consensus 500 ~~~i~~-~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~~~G~~~~~ 578 (755)
T KOG2100|consen 500 FGKIEI-DGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAVLQVDGRGSGGYGWDFRS 578 (755)
T ss_pred eEEEEe-ccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHHhhccCCeEEEEEcCCCcCCcchhHHH
Confidence 344455 6657766654331 22567889999874322 11222 34568999999999997765432
Q ss_pred ---CCCCccchHHHHHHHHHHHHHh--CCCcEEEEEeChhHHHHHHHHHhCCCc-eeeEEEeccccchhhhhhhHhhccc
Q 020067 89 ---ACLDQNTTWDLIDDIEKLRQHL--EIPEWQVFGGSWGSTLALAYSLAHPDK-VTGLVLRGIFLLRKKEIDWFYEGGA 162 (331)
Q Consensus 89 ---~~~~~~~~~~~~~~~~~~~~~~--~~~~v~lvG~S~Gg~~a~~~a~~~p~~-v~~li~~~~~~~~~~~~~~~~~~~~ 162 (331)
........+|+...+..+++.. +.+++.++|+|.||.+++.++...|+. ++..+.++|.....-
T Consensus 579 ~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~~---------- 648 (755)
T KOG2100|consen 579 ALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWLY---------- 648 (755)
T ss_pred HhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeeee----------
Confidence 1223456777777777777665 445899999999999999999999855 455599998765320
Q ss_pred ccCChhhHHhhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhh
Q 020067 163 AAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIEN 242 (331)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (331)
.... .-.++. ..+. ..... +.
T Consensus 649 ----yds~--------------~terym---g~p~-------------------------~~~~~-----y~-------- 669 (755)
T KOG2100|consen 649 ----YDST--------------YTERYM---GLPS-------------------------ENDKG-----YE-------- 669 (755)
T ss_pred ----eccc--------------ccHhhc---CCCc-------------------------cccch-----hh--------
Confidence 0000 000000 0000 00000 00
Q ss_pred hhhhccCCCCCcchhhhhccccccccE-EEEecCCCCccCCcchHHHHHhCC----CCcEEEecCCCCCCCcCCchhHHH
Q 020067 243 HYFLNKGFFPSDSFLLDNIDNIRHINA-TIVQGRYDVCCPMMSAWDLHKAWP----EADFKVVADAGHSANEPGIAAELV 317 (331)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~l~~i~~~P~-l~i~G~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~~~~~~~~~ 317 (331)
.......+..++ .|. |+|||+.|.-|+.+.+..+.+.+. ..++.++|+.+|.+-....-..+.
T Consensus 670 -----------e~~~~~~~~~~~-~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde~H~is~~~~~~~~~ 737 (755)
T KOG2100|consen 670 -----------ESSVSSPANNIK-TPKLLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYPDENHGISYVEVISHLY 737 (755)
T ss_pred -----------hccccchhhhhc-cCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeCCCCcccccccchHHHH
Confidence 222334566664 555 999999999999988888887762 378899999999997654457788
Q ss_pred HHHHHHHHhh
Q 020067 318 ATNEKLKNLI 327 (331)
Q Consensus 318 ~~i~~fl~~~ 327 (331)
..+..|+...
T Consensus 738 ~~~~~~~~~~ 747 (755)
T KOG2100|consen 738 EKLDRFLRDC 747 (755)
T ss_pred HHHHHHHHHH
Confidence 8899998754
No 119
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=99.34 E-value=7.6e-11 Score=92.17 Aligned_cols=238 Identities=13% Similarity=0.099 Sum_probs=127.7
Q ss_pred CCCCcEEEeccCCCCCCCC--C-cccccCCCCcEEEEecCCCCCCCCCCCCCCc--cchHH-------HHHH---HHHHH
Q 020067 43 PTGHPVVFLHGGPGGGTTP--S-NRRFFDPDFYRIILFDQRGAGKSTPHACLDQ--NTTWD-------LIDD---IEKLR 107 (331)
Q Consensus 43 ~~~~~vl~~HG~~~~~~~~--~-~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~--~~~~~-------~~~~---~~~~~ 107 (331)
+.+|.+|.++|-++...+. . .+..++++|+..+.+..|-||.-.+...... .+..| .+.+ +..++
T Consensus 90 ~~rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~Wl 169 (348)
T PF09752_consen 90 PYRPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLHWL 169 (348)
T ss_pred CCCceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHHHH
Confidence 3567788888866655552 2 3677888999999999999998764431110 11111 1222 22333
Q ss_pred HHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHH
Q 020067 108 QHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVD 187 (331)
Q Consensus 108 ~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (331)
+.-|..++.+.|.||||.+|...|+.+|..+..+-.+++......-..-.... ...|.................
T Consensus 170 ~~~G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~vFt~Gvls~------~i~W~~L~~q~~~~~~~~~~~ 243 (348)
T PF09752_consen 170 EREGYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASVVFTEGVLSN------SINWDALEKQFEDTVYEEEIS 243 (348)
T ss_pred HhcCCCceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCcchhhhhhhc------CCCHHHHHHHhcccchhhhhc
Confidence 44488899999999999999999999998777666665533221100000000 112222222111111000000
Q ss_pred hhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhccccc--
Q 020067 188 AYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIR-- 265 (331)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~-- 265 (331)
........ ...........+.-...+... ..+....+.++.
T Consensus 244 ~~~~~~~~------------------------~~~~~~~~~~~~~Ea~~~m~~-------------~md~~T~l~nf~~P 286 (348)
T PF09752_consen 244 DIPAQNKS------------------------LPLDSMEERRRDREALRFMRG-------------VMDSFTHLTNFPVP 286 (348)
T ss_pred ccccCccc------------------------ccchhhccccchHHHHHHHHH-------------HHHhhccccccCCC
Confidence 00000000 000000000000000000000 000011122221
Q ss_pred --cccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCC-CcCCchhHHHHHHHHHHH
Q 020067 266 --HINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSA-NEPGIAAELVATNEKLKN 325 (331)
Q Consensus 266 --~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~-~~~~~~~~~~~~i~~fl~ 325 (331)
.-.+.++.+++|..+|......+.+..|++++..+++ ||.- ++-+ .+.+-+.|.+-++
T Consensus 287 ~dp~~ii~V~A~~DaYVPr~~v~~Lq~~WPGsEvR~l~g-GHVsA~L~~-q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 287 VDPSAIIFVAAKNDAYVPRHGVLSLQEIWPGSEVRYLPG-GHVSAYLLH-QEAFRQAIYDAFE 347 (348)
T ss_pred CCCCcEEEEEecCceEechhhcchHHHhCCCCeEEEecC-CcEEEeeec-hHHHHHHHHHHhh
Confidence 2457899999999999988889999999999999985 9975 3343 6777778777664
No 120
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=99.33 E-value=1.2e-10 Score=96.44 Aligned_cols=223 Identities=14% Similarity=0.106 Sum_probs=142.9
Q ss_pred cceeEeCCCceEEEEeCCC------CCCCcEEEeccCCCCCC----C----CCcccccCCCCcEEEEecCCCCCCCCCCC
Q 020067 24 TGILKVSDIHTIYWEQSGN------PTGHPVVFLHGGPGGGT----T----PSNRRFFDPDFYRIILFDQRGAGKSTPHA 89 (331)
Q Consensus 24 ~~~~~~~~g~~l~~~~~g~------~~~~~vl~~HG~~~~~~----~----~~~~~~~~~~g~~vi~~D~~G~G~s~~~~ 89 (331)
-..+++..|.+++--.+.+ ++-|+++++-||++... + +.-...+++.||.|+.+|-||.-......
T Consensus 615 if~fqs~tg~~lYgmiyKPhn~~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlkF 694 (867)
T KOG2281|consen 615 IFSFQSKTGLTLYGMIYKPHNFQPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLKF 694 (867)
T ss_pred heeeecCCCcEEEEEEEccccCCCCCCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchhh
Confidence 3445666775554333321 13578999999987421 1 22334466799999999999954333111
Q ss_pred ------CCCccchHHHHHHHHHHHHHhC---CCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhc
Q 020067 90 ------CLDQNTTWDLIDDIEKLRQHLE---IPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEG 160 (331)
Q Consensus 90 ------~~~~~~~~~~~~~~~~~~~~~~---~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~ 160 (331)
......++|.++.++.+.++.| .++|.+-|||+||++++....++|+-++..|.-+|.....
T Consensus 695 E~~ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT~W~--------- 765 (867)
T KOG2281|consen 695 ESHIKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVTDWR--------- 765 (867)
T ss_pred HHHHhhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcceeeEEeccCcceeee---------
Confidence 1235678999999999999875 5699999999999999999999999888777666654321
Q ss_pred ccccCChhhHHhhhccCCcchhhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhh
Q 020067 161 GAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARI 240 (331)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (331)
.+-.. ..++++..... .-..+.
T Consensus 766 -----------~YDTg--------YTERYMg~P~~----------------------------nE~gY~----------- 787 (867)
T KOG2281|consen 766 -----------LYDTG--------YTERYMGYPDN----------------------------NEHGYG----------- 787 (867)
T ss_pred -----------eeccc--------chhhhcCCCcc----------------------------chhccc-----------
Confidence 00000 00011100000 000000
Q ss_pred hhhhhhccCCCCCcchhhhhccccc--cccEEEEecCCCCccCCcchHHHHHhC----CCCcEEEecCCCCCCCcCCchh
Q 020067 241 ENHYFLNKGFFPSDSFLLDNIDNIR--HINATIVQGRYDVCCPMMSAWDLHKAW----PEADFKVVADAGHSANEPGIAA 314 (331)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~l~~i~--~~P~l~i~G~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~~~~~~ 314 (331)
...+.....+++ ....|++||--|.-|.......+.+.+ +..+++++|+-.|.+-..+...
T Consensus 788 -------------agSV~~~VeklpdepnRLlLvHGliDENVHF~Hts~Lvs~lvkagKpyeL~IfP~ERHsiR~~es~~ 854 (867)
T KOG2281|consen 788 -------------AGSVAGHVEKLPDEPNRLLLVHGLIDENVHFAHTSRLVSALVKAGKPYELQIFPNERHSIRNPESGI 854 (867)
T ss_pred -------------chhHHHHHhhCCCCCceEEEEecccccchhhhhHHHHHHHHHhCCCceEEEEccccccccCCCccch
Confidence 111222223332 356899999999999887776666655 4578999999999997655577
Q ss_pred HHHHHHHHHHHh
Q 020067 315 ELVATNEKLKNL 326 (331)
Q Consensus 315 ~~~~~i~~fl~~ 326 (331)
-+-..|..|+++
T Consensus 855 ~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 855 YYEARLLHFLQE 866 (867)
T ss_pred hHHHHHHHHHhh
Confidence 788888888875
No 121
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.33 E-value=1.4e-10 Score=86.64 Aligned_cols=105 Identities=15% Similarity=0.092 Sum_probs=67.3
Q ss_pred CCcEEEeccCCCCCCC----CCcccccCCCCcEEEEecCCCCCCCCC-------CCCCCccchHHHHHHHHHHHHHhCC-
Q 020067 45 GHPVVFLHGGPGGGTT----PSNRRFFDPDFYRIILFDQRGAGKSTP-------HACLDQNTTWDLIDDIEKLRQHLEI- 112 (331)
Q Consensus 45 ~~~vl~~HG~~~~~~~----~~~~~~~~~~g~~vi~~D~~G~G~s~~-------~~~~~~~~~~~~~~~~~~~~~~~~~- 112 (331)
.|.||++||..++... ..+.....+.||-|+.|+......... ......-+...+++.+..+.++.++
T Consensus 16 ~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~~~iD 95 (220)
T PF10503_consen 16 VPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAARYNID 95 (220)
T ss_pred CCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhhcccC
Confidence 4789999997665332 122223335789999998642211110 0000111233344445555555544
Q ss_pred -CcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccc
Q 020067 113 -PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLL 149 (331)
Q Consensus 113 -~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~ 149 (331)
.+|++.|+|.||.++..++..+|+.+.++...++...
T Consensus 96 ~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~~ 133 (220)
T PF10503_consen 96 PSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVPY 133 (220)
T ss_pred CCceeeEEECHHHHHHHHHHHhCCccceEEEeeccccc
Confidence 5899999999999999999999999999988887543
No 122
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.31 E-value=2.7e-11 Score=85.92 Aligned_cols=188 Identities=15% Similarity=0.073 Sum_probs=116.6
Q ss_pred EEEeCCC-CCCCcEEEeccCCCC----CCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHh
Q 020067 36 YWEQSGN-PTGHPVVFLHGGPGG----GTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHL 110 (331)
Q Consensus 36 ~~~~~g~-~~~~~vl~~HG~~~~----~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (331)
....+|+ ...+..||+|||-.. ......+....+.||+|..+++ +.+..... -..++.+...-+..+++..
T Consensus 57 ~VDIwg~~~~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY---~l~~q~ht-L~qt~~~~~~gv~filk~~ 132 (270)
T KOG4627|consen 57 LVDIWGSTNQAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGY---NLCPQVHT-LEQTMTQFTHGVNFILKYT 132 (270)
T ss_pred EEEEecCCCCccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEecc---CcCccccc-HHHHHHHHHHHHHHHHHhc
Confidence 3445664 345788999995322 2335566777789999999864 44442211 1234445555555566666
Q ss_pred CC-CcEEEEEeChhHHHHHHHHHhC-CCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcchhhhhHHh
Q 020067 111 EI-PEWQVFGGSWGSTLALAYSLAH-PDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDA 188 (331)
Q Consensus 111 ~~-~~v~lvG~S~Gg~~a~~~a~~~-p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (331)
.. +++.+-|||.|+.+++.+..+- ..+|.|+++.++......... . .
T Consensus 133 ~n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l~EL~~--------------------t----e------- 181 (270)
T KOG4627|consen 133 ENTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDLRELSN--------------------T----E------- 181 (270)
T ss_pred ccceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhhHHHHhC--------------------C----c-------
Confidence 54 4566779999999999887763 448999999887554221000 0 0
Q ss_pred hccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhcccccccc
Q 020067 189 YSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNIDNIRHIN 268 (331)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P 268 (331)
....+. ...+..+.. ..+ ...+..+ +.|
T Consensus 182 ~g~dlg-------------------------Lt~~~ae~~-------------------------Scd-l~~~~~v-~~~ 209 (270)
T KOG4627|consen 182 SGNDLG-------------------------LTERNAESV-------------------------SCD-LWEYTDV-TVW 209 (270)
T ss_pred cccccC-------------------------cccchhhhc-------------------------Ccc-HHHhcCc-eee
Confidence 000000 000000000 111 1245566 599
Q ss_pred EEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcC
Q 020067 269 ATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEP 310 (331)
Q Consensus 269 ~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 310 (331)
+|++.+++|.-.-.+..+.+.+.+..+++..+++.+|+-..+
T Consensus 210 ilVv~~~~espklieQnrdf~~q~~~a~~~~f~n~~hy~I~~ 251 (270)
T KOG4627|consen 210 ILVVAAEHESPKLIEQNRDFADQLRKASFTLFKNYDHYDIIE 251 (270)
T ss_pred eeEeeecccCcHHHHhhhhHHHHhhhcceeecCCcchhhHHH
Confidence 999999999776678888999998889999999999987543
No 123
>PRK04940 hypothetical protein; Provisional
Probab=99.27 E-value=8.6e-10 Score=78.57 Aligned_cols=53 Identities=8% Similarity=0.030 Sum_probs=39.6
Q ss_pred ccEEEEecCCCCccCCcchHHHHHhCCCC-cEEEecCCCCCCCcCCchhHHHHHHHHHHH
Q 020067 267 INATIVQGRYDVCCPMMSAWDLHKAWPEA-DFKVVADAGHSANEPGIAAELVATNEKLKN 325 (331)
Q Consensus 267 ~P~l~i~G~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~ 325 (331)
-..+++..+.|++.+...+ .+.+.++ ++++.+|+.|.+. . -++....|.+|++
T Consensus 125 ~r~~vllq~gDEvLDyr~a---~~~y~~~y~~~v~~GGdH~f~--~-fe~~l~~I~~F~~ 178 (180)
T PRK04940 125 DRCLVILSRNDEVLDSQRT---AEELHPYYEIVWDEEQTHKFK--N-ISPHLQRIKAFKT 178 (180)
T ss_pred ccEEEEEeCCCcccCHHHH---HHHhccCceEEEECCCCCCCC--C-HHHHHHHHHHHHh
Confidence 4469999999999986544 3444555 7888999999873 2 5668889999984
No 124
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=99.27 E-value=6.2e-11 Score=93.50 Aligned_cols=88 Identities=17% Similarity=0.134 Sum_probs=54.9
Q ss_pred cccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCC---CcEEEEEeChhHHHHHHHHHhC----C
Q 020067 63 NRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEI---PEWQVFGGSWGSTLALAYSLAH----P 135 (331)
Q Consensus 63 ~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~v~lvG~S~Gg~~a~~~a~~~----p 135 (331)
.+..++++||.|+++|+.|.|..........+..-|.+....++....+. .++.++|||.||.-++.++... |
T Consensus 18 ~l~~~L~~GyaVv~pDY~Glg~~y~~~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~l~~~YAp 97 (290)
T PF03583_consen 18 FLAAWLARGYAVVAPDYEGLGTPYLNGRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAAELAPSYAP 97 (290)
T ss_pred HHHHHHHCCCEEEecCCCCCCCcccCcHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHHHHhHHhCc
Confidence 45567789999999999999983322211122222333333333332332 4799999999999887766442 5
Q ss_pred Cc---eeeEEEeccccch
Q 020067 136 DK---VTGLVLRGIFLLR 150 (331)
Q Consensus 136 ~~---v~~li~~~~~~~~ 150 (331)
|. +.+.++.+++...
T Consensus 98 eL~~~l~Gaa~gg~~~dl 115 (290)
T PF03583_consen 98 ELNRDLVGAAAGGPPADL 115 (290)
T ss_pred ccccceeEEeccCCccCH
Confidence 43 7777777765543
No 125
>COG4099 Predicted peptidase [General function prediction only]
Probab=99.26 E-value=1.1e-10 Score=87.76 Aligned_cols=115 Identities=21% Similarity=0.096 Sum_probs=68.8
Q ss_pred CCCceEEEEeCCC----C--CC-CcEEEeccCCCCCCC-C--------CcccccCCCCcEEEEecCCC-CCCCCCCCCCC
Q 020067 30 SDIHTIYWEQSGN----P--TG-HPVVFLHGGPGGGTT-P--------SNRRFFDPDFYRIILFDQRG-AGKSTPHACLD 92 (331)
Q Consensus 30 ~~g~~l~~~~~g~----~--~~-~~vl~~HG~~~~~~~-~--------~~~~~~~~~g~~vi~~D~~G-~G~s~~~~~~~ 92 (331)
..|.++.|+-+-+ + +- |.|||+||.+..+.. . ..+-..-+.++-|++|.+-- +-.++..+
T Consensus 169 ~tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy~~if~d~e~~t--- 245 (387)
T COG4099 169 STGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQYNPIFADSEEKT--- 245 (387)
T ss_pred ccCceeeEEEecccccCCCCccccEEEEEecCCCCCchhhhhhhcCccceeeecccCceEEEccccccccccccccc---
Confidence 4566777775543 1 22 779999996543322 1 11112223445566666321 22222211
Q ss_pred ccchHHHHHHHH-HHHHHhCC--CcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccc
Q 020067 93 QNTTWDLIDDIE-KLRQHLEI--PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIF 147 (331)
Q Consensus 93 ~~~~~~~~~~~~-~~~~~~~~--~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~ 147 (331)
..-.....+-+. .+.++..+ .+|+++|.|+||.-++.++.++|+.+++.+++++.
T Consensus 246 ~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~ 303 (387)
T COG4099 246 LLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGG 303 (387)
T ss_pred chhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCC
Confidence 112233344444 33445444 48999999999999999999999999999999874
No 126
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=99.22 E-value=3.8e-10 Score=81.56 Aligned_cols=61 Identities=11% Similarity=0.119 Sum_probs=47.0
Q ss_pred ccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHh
Q 020067 261 IDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNL 326 (331)
Q Consensus 261 l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 326 (331)
...+ ++|.|-|.|+.|.++|...++.+++.+++..++.-| +||++.... ...+.|.+|++.
T Consensus 159 ~~~i-~~PSLHi~G~~D~iv~~~~s~~L~~~~~~a~vl~Hp-ggH~VP~~~---~~~~~i~~fi~~ 219 (230)
T KOG2551|consen 159 KRPL-STPSLHIFGETDTIVPSERSEQLAESFKDATVLEHP-GGHIVPNKA---KYKEKIADFIQS 219 (230)
T ss_pred ccCC-CCCeeEEecccceeecchHHHHHHHhcCCCeEEecC-CCccCCCch---HHHHHHHHHHHH
Confidence 3456 699999999999999999999999999999666666 899986432 344555555544
No 127
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=99.22 E-value=2.7e-11 Score=91.22 Aligned_cols=38 Identities=21% Similarity=0.209 Sum_probs=31.9
Q ss_pred CCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccch
Q 020067 112 IPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLR 150 (331)
Q Consensus 112 ~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~ 150 (331)
.++|.|+|.|.||-+|+.+|..+| .|+++|+++|....
T Consensus 21 ~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~~ 58 (213)
T PF08840_consen 21 PDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSVV 58 (213)
T ss_dssp -SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB-
T ss_pred CCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCceeE
Confidence 358999999999999999999999 79999999987654
No 128
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.20 E-value=2.4e-10 Score=82.03 Aligned_cols=175 Identities=17% Similarity=0.125 Sum_probs=108.3
Q ss_pred CCcEEEeccCCCC-CCCCCcccccCCCCcEEEEecCCCCCCCC-----------------CCCCCCccchHHHHHHHHHH
Q 020067 45 GHPVVFLHGGPGG-GTTPSNRRFFDPDFYRIILFDQRGAGKST-----------------PHACLDQNTTWDLIDDIEKL 106 (331)
Q Consensus 45 ~~~vl~~HG~~~~-~~~~~~~~~~~~~g~~vi~~D~~G~G~s~-----------------~~~~~~~~~~~~~~~~~~~~ 106 (331)
..+||++||.+.+ ..|...+..+.-++...|.|.-|-.-.+. .... +.......++.+..+
T Consensus 3 ~atIi~LHglGDsg~~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~-d~~~~~~aa~~i~~L 81 (206)
T KOG2112|consen 3 TATIIFLHGLGDSGSGWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPE-DEEGLHRAADNIANL 81 (206)
T ss_pred eEEEEEEecCCCCCccHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccch-hhhHHHHHHHHHHHH
Confidence 3479999996554 44433333343355555655443211110 0000 123444556666666
Q ss_pred HHHh---C--CCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchhhhhhhHhhcccccCChhhHHhhhccCCcch
Q 020067 107 RQHL---E--IPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENE 181 (331)
Q Consensus 107 ~~~~---~--~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (331)
++.. + ..++.+-|.|+||.+++..+..+|..+.+++...+.......
T Consensus 82 i~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p~~~~---------------------------- 133 (206)
T KOG2112|consen 82 IDNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLPRASI---------------------------- 133 (206)
T ss_pred HHHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccccccchh----------------------------
Confidence 6553 2 357999999999999999999998888888877664321000
Q ss_pred hhhhHHhhccccCCCchHHHHHHHHHhhhHHHhhhcCCCChhhhhcCCccHHHHHHhhhhhhhhhccCCCCCcchhhhhc
Q 020067 182 RSCFVDAYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLAFARIENHYFLNKGFFPSDSFLLDNI 261 (331)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 261 (331)
. ........
T Consensus 134 ------~-----------------------------------------------------------------~~~~~~~~ 142 (206)
T KOG2112|consen 134 ------G-----------------------------------------------------------------LPGWLPGV 142 (206)
T ss_pred ------h-----------------------------------------------------------------ccCCcccc
Confidence 0 00000000
Q ss_pred cccccccEEEEecCCCCccCCcchHHHHHhC----CCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhh
Q 020067 262 DNIRHINATIVQGRYDVCCPMMSAWDLHKAW----PEADFKVVADAGHSANEPGIAAELVATNEKLKNLI 327 (331)
Q Consensus 262 ~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 327 (331)
. ..|++..||+.|++||....+...+.+ ..++++.+++-+|....++ .+.+..|++++
T Consensus 143 ~---~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~~~~f~~y~g~~h~~~~~e-----~~~~~~~~~~l 204 (206)
T KOG2112|consen 143 N---YTPILLCHGTADPLVPFRFGEKSAQFLKSLGVRVTFKPYPGLGHSTSPQE-----LDDLKSWIKTL 204 (206)
T ss_pred C---cchhheecccCCceeehHHHHHHHHHHHHcCCceeeeecCCccccccHHH-----HHHHHHHHHHh
Confidence 0 389999999999999987666555544 3478899999999986554 56777777664
No 129
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=99.19 E-value=5.1e-09 Score=85.43 Aligned_cols=100 Identities=24% Similarity=0.269 Sum_probs=69.1
Q ss_pred CCCcEEEe-----cc-CCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHh-----CC
Q 020067 44 TGHPVVFL-----HG-GPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHL-----EI 112 (331)
Q Consensus 44 ~~~~vl~~-----HG-~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 112 (331)
.++|+|++ || +-+.-.-...+-..+..|+.|+.+.+. ..+. ...+++++......+++.+ +.
T Consensus 67 ~krP~vViDPRAGHGpGIGGFK~dSevG~AL~~GHPvYFV~F~----p~P~---pgQTl~DV~~ae~~Fv~~V~~~hp~~ 139 (581)
T PF11339_consen 67 TKRPFVVIDPRAGHGPGIGGFKPDSEVGVALRAGHPVYFVGFF----PEPE---PGQTLEDVMRAEAAFVEEVAERHPDA 139 (581)
T ss_pred CCCCeEEeCCCCCCCCCccCCCcccHHHHHHHcCCCeEEEEec----CCCC---CCCcHHHHHHHHHHHHHHHHHhCCCC
Confidence 45566666 44 222222233444455679998888765 1222 2467888877777776655 23
Q ss_pred CcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccch
Q 020067 113 PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLR 150 (331)
Q Consensus 113 ~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~ 150 (331)
.|.+|+|-|.||+.++.+|+.+|+.+.-+|+.+++...
T Consensus 140 ~kp~liGnCQgGWa~~mlAA~~Pd~~gplvlaGaPlsy 177 (581)
T PF11339_consen 140 PKPNLIGNCQGGWAAMMLAALRPDLVGPLVLAGAPLSY 177 (581)
T ss_pred CCceEEeccHHHHHHHHHHhcCcCccCceeecCCCccc
Confidence 48999999999999999999999999888888876654
No 130
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=99.18 E-value=1.9e-11 Score=92.22 Aligned_cols=47 Identities=21% Similarity=0.197 Sum_probs=32.7
Q ss_pred cccccccEEEEecCCCCccCCcchHHHHHhCCC-CcEEEecCCCCCCCcC
Q 020067 262 DNIRHINATIVQGRYDVCCPMMSAWDLHKAWPE-ADFKVVADAGHSANEP 310 (331)
Q Consensus 262 ~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~ 310 (331)
..| ++|+|-|+|++|.+++++.++.+.+.+.+ .+++..+ +||.+...
T Consensus 158 ~~i-~iPtlHv~G~~D~~~~~~~s~~L~~~~~~~~~v~~h~-gGH~vP~~ 205 (212)
T PF03959_consen 158 PKI-SIPTLHVIGENDPVVPPERSEALAEMFDPDARVIEHD-GGHHVPRK 205 (212)
T ss_dssp TT----EEEEEEETT-SSS-HHHHHHHHHHHHHHEEEEEES-SSSS----
T ss_pred ccC-CCCeEEEEeCCCCCcchHHHHHHHHhccCCcEEEEEC-CCCcCcCC
Confidence 345 69999999999999999999999999866 7777776 78887654
No 131
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.18 E-value=1.1e-10 Score=88.37 Aligned_cols=105 Identities=18% Similarity=0.156 Sum_probs=68.0
Q ss_pred CCCcEEEeccCCCCCC-CCCccccc--------CCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHh----
Q 020067 44 TGHPVVFLHGGPGGGT-TPSNRRFF--------DPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHL---- 110 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~-~~~~~~~~--------~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~---- 110 (331)
++.+|||+||..++.. ++.+.... ....+++++.|+......-.... -....+.+.+.+..+++.+
T Consensus 3 ~g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g~~-l~~q~~~~~~~i~~i~~~~~~~~ 81 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFHGRT-LQRQAEFLAEAIKYILELYKSNR 81 (225)
T ss_pred CCCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCcccccccccc-HHHHHHHHHHHHHHHHHhhhhcc
Confidence 6789999999766533 22222222 23468899999876532221110 0112233444555565655
Q ss_pred -CCCcEEEEEeChhHHHHHHHHHhCC---CceeeEEEeccccc
Q 020067 111 -EIPEWQVFGGSWGSTLALAYSLAHP---DKVTGLVLRGIFLL 149 (331)
Q Consensus 111 -~~~~v~lvG~S~Gg~~a~~~a~~~p---~~v~~li~~~~~~~ 149 (331)
+.+++++|||||||.++-.++...+ +.|+++|.+++|..
T Consensus 82 ~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~ 124 (225)
T PF07819_consen 82 PPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHR 124 (225)
T ss_pred CCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCC
Confidence 4578999999999999998887643 57999999998764
No 132
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.18 E-value=9.3e-10 Score=88.87 Aligned_cols=102 Identities=27% Similarity=0.159 Sum_probs=71.0
Q ss_pred CCCcEEEeccCCCCCC---C--CCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHh---C--CC
Q 020067 44 TGHPVVFLHGGPGGGT---T--PSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHL---E--IP 113 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~---~--~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~ 113 (331)
+.|+||++|||+.... . ..........|+.|+++|+|-.-+-. ....+++..+.+..+.++. + .+
T Consensus 78 ~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~~-----~p~~~~d~~~a~~~l~~~~~~~g~dp~ 152 (312)
T COG0657 78 TAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEHP-----FPAALEDAYAAYRWLRANAAELGIDPS 152 (312)
T ss_pred CCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCCC-----CCchHHHHHHHHHHHHhhhHhhCCCcc
Confidence 4688999999754322 2 22333344589999999999644332 2345666666666666553 3 56
Q ss_pred cEEEEEeChhHHHHHHHHHhCCC----ceeeEEEeccccch
Q 020067 114 EWQVFGGSWGSTLALAYSLAHPD----KVTGLVLRGIFLLR 150 (331)
Q Consensus 114 ~v~lvG~S~Gg~~a~~~a~~~p~----~v~~li~~~~~~~~ 150 (331)
+|.++|+|.||.+++.++..-.+ ...+.+++.|....
T Consensus 153 ~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~ 193 (312)
T COG0657 153 RIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDL 193 (312)
T ss_pred ceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCC
Confidence 89999999999999999887543 47888888886553
No 133
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=99.16 E-value=9e-09 Score=86.90 Aligned_cols=131 Identities=16% Similarity=0.211 Sum_probs=84.1
Q ss_pred CccceeEeC--CCceEEEEeCC----CCCCCcEEEeccCCCCCCCCCcccc-------------cC------CCCcEEEE
Q 020067 22 YSTGILKVS--DIHTIYWEQSG----NPTGHPVVFLHGGPGGGTTPSNRRF-------------FD------PDFYRIIL 76 (331)
Q Consensus 22 ~~~~~~~~~--~g~~l~~~~~g----~~~~~~vl~~HG~~~~~~~~~~~~~-------------~~------~~g~~vi~ 76 (331)
....++++. .+..++|+-.. +.+.|.||++.||+|+++.+..... +. .+..+++-
T Consensus 11 ~~sGyl~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~an~l~ 90 (415)
T PF00450_consen 11 QYSGYLPVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNKFANLLF 90 (415)
T ss_dssp EEEEEEEECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGGTSEEEE
T ss_pred EEEEEEecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCceeccccccccccCceEEeecccccccccccccccccceEE
Confidence 345678887 66688887553 2456889999999887654211100 00 14578999
Q ss_pred ecCC-CCCCCCCCCCC-CccchHHHHHHHHHHHHHh-------CCCcEEEEEeChhHHHHHHHHHh----C------CCc
Q 020067 77 FDQR-GAGKSTPHACL-DQNTTWDLIDDIEKLRQHL-------EIPEWQVFGGSWGSTLALAYSLA----H------PDK 137 (331)
Q Consensus 77 ~D~~-G~G~s~~~~~~-~~~~~~~~~~~~~~~~~~~-------~~~~v~lvG~S~Gg~~a~~~a~~----~------p~~ 137 (331)
+|.| |.|.|...... ...+.++.++++..++..+ ...+++|.|.|+||..+..+|.. . +-.
T Consensus 91 iD~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~in 170 (415)
T PF00450_consen 91 IDQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKIN 170 (415)
T ss_dssp E--STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSE
T ss_pred EeecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccc
Confidence 9965 99999765432 2346677888887777654 44589999999999887777653 2 235
Q ss_pred eeeEEEeccccchhh
Q 020067 138 VTGLVLRGIFLLRKK 152 (331)
Q Consensus 138 v~~li~~~~~~~~~~ 152 (331)
++|+++.++...+..
T Consensus 171 LkGi~IGng~~dp~~ 185 (415)
T PF00450_consen 171 LKGIAIGNGWIDPRI 185 (415)
T ss_dssp EEEEEEESE-SBHHH
T ss_pred cccceecCccccccc
Confidence 899999998877643
No 134
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.11 E-value=4.5e-10 Score=83.24 Aligned_cols=101 Identities=17% Similarity=0.080 Sum_probs=69.4
Q ss_pred CCCcEEEeccCC-CCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHH---Hh-------CC
Q 020067 44 TGHPVVFLHGGP-GGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQ---HL-------EI 112 (331)
Q Consensus 44 ~~~~vl~~HG~~-~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~---~~-------~~ 112 (331)
.-|.|+|+||+. .+..|......+.+.||-|+++++-..-. +. ....++..++-+.++.+ .+ +.
T Consensus 45 ~yPVilF~HG~~l~ns~Ys~lL~HIASHGfIVVAPQl~~~~~---p~--~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~~nl 119 (307)
T PF07224_consen 45 TYPVILFLHGFNLYNSFYSQLLAHIASHGFIVVAPQLYTLFP---PD--GQDEIKSAASVINWLPEGLQHVLPENVEANL 119 (307)
T ss_pred CccEEEEeechhhhhHHHHHHHHHHhhcCeEEEechhhcccC---CC--chHHHHHHHHHHHHHHhhhhhhCCCCccccc
Confidence 457899999954 45666778888889999999999875311 21 11122222222222222 22 34
Q ss_pred CcEEEEEeChhHHHHHHHHHhCC--CceeeEEEeccccc
Q 020067 113 PEWQVFGGSWGSTLALAYSLAHP--DKVTGLVLRGIFLL 149 (331)
Q Consensus 113 ~~v~lvG~S~Gg~~a~~~a~~~p--~~v~~li~~~~~~~ 149 (331)
.++.++|||.||-.|..+|..+. -.++++|.++|...
T Consensus 120 ~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G 158 (307)
T PF07224_consen 120 SKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAG 158 (307)
T ss_pred ceEEEeecCCccHHHHHHHhcccccCchhheecccccCC
Confidence 58999999999999999999873 25899999998654
No 135
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=99.11 E-value=4.4e-09 Score=80.53 Aligned_cols=106 Identities=16% Similarity=0.139 Sum_probs=60.1
Q ss_pred CCCcEEEeccCCCCCC-CCCcccccC-CCC----cEEEEecCCCC----CCCC---CCC-------CCCccchHHHHHHH
Q 020067 44 TGHPVVFLHGGPGGGT-TPSNRRFFD-PDF----YRIILFDQRGA----GKST---PHA-------CLDQNTTWDLIDDI 103 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~-~~~~~~~~~-~~g----~~vi~~D~~G~----G~s~---~~~-------~~~~~~~~~~~~~~ 103 (331)
+..|.||+||++++.. +..++..+. +.| .-++-++.-|. |.=. ..+ +....++...+..+
T Consensus 10 ~~tPTifihG~~gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~wl 89 (255)
T PF06028_consen 10 STTPTIFIHGYGGTANSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKWL 89 (255)
T ss_dssp S-EEEEEE--TTGGCCCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHHH
T ss_pred CCCcEEEECCCCCChhHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHHH
Confidence 3457999999777644 444444443 322 22333343332 2111 111 10113566677777
Q ss_pred HHHHHHh----CCCcEEEEEeChhHHHHHHHHHhCCC-----ceeeEEEeccccc
Q 020067 104 EKLRQHL----EIPEWQVFGGSWGSTLALAYSLAHPD-----KVTGLVLRGIFLL 149 (331)
Q Consensus 104 ~~~~~~~----~~~~v~lvG~S~Gg~~a~~~a~~~p~-----~v~~li~~~~~~~ 149 (331)
..++..| +.+++.+|||||||..++.++..+.. .+.++|.|+++..
T Consensus 90 ~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfn 144 (255)
T PF06028_consen 90 KKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFN 144 (255)
T ss_dssp HHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TT
T ss_pred HHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccC
Confidence 6666555 67899999999999999999988532 5899999998654
No 136
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=99.10 E-value=7.7e-10 Score=86.94 Aligned_cols=93 Identities=20% Similarity=0.160 Sum_probs=60.9
Q ss_pred CCCcEEEeccCCCC-CCCCCcccccCCCCcEEEEecCCCC--CCCCCCCCC----CccchHHHHHHHHHHHHH-------
Q 020067 44 TGHPVVFLHGGPGG-GTTPSNRRFFDPDFYRIILFDQRGA--GKSTPHACL----DQNTTWDLIDDIEKLRQH------- 109 (331)
Q Consensus 44 ~~~~vl~~HG~~~~-~~~~~~~~~~~~~g~~vi~~D~~G~--G~s~~~~~~----~~~~~~~~~~~~~~~~~~------- 109 (331)
.-|.|++-||.++. ..+.+..+.+.+.||-|.++|++|- |........ ....+.+-..|+..+++.
T Consensus 70 ~~PlvvlshG~Gs~~~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~s 149 (365)
T COG4188 70 LLPLVVLSHGSGSYVTGFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLTAS 149 (365)
T ss_pred cCCeEEecCCCCCCccchhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHhhcC
Confidence 34778999995444 5567778888899999999999993 333321110 111122333344433332
Q ss_pred ------hCCCcEEEEEeChhHHHHHHHHHhCCC
Q 020067 110 ------LEIPEWQVFGGSWGSTLALAYSLAHPD 136 (331)
Q Consensus 110 ------~~~~~v~lvG~S~Gg~~a~~~a~~~p~ 136 (331)
++..+|.++|||+||+.++.++..+.+
T Consensus 150 P~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~ 182 (365)
T COG4188 150 PALAGRLDPQRVGVLGHSFGGYTAMELAGAELD 182 (365)
T ss_pred cccccccCccceEEEecccccHHHHHhcccccc
Confidence 334589999999999999999876644
No 137
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=99.10 E-value=1.7e-08 Score=80.35 Aligned_cols=102 Identities=17% Similarity=0.074 Sum_probs=71.4
Q ss_pred CCCcEEEeccCCC---CCC---CCCccccc-CCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHH------h
Q 020067 44 TGHPVVFLHGGPG---GGT---TPSNRRFF-DPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQH------L 110 (331)
Q Consensus 44 ~~~~vl~~HG~~~---~~~---~~~~~~~~-~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~------~ 110 (331)
..|.||++|||+. +.. +..+...+ .+.+..|+++|+|=--+.. ....++|-.+.+..+.++ .
T Consensus 89 ~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh~-----~Pa~y~D~~~Al~w~~~~~~~~~~~ 163 (336)
T KOG1515|consen 89 KLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEHP-----FPAAYDDGWAALKWVLKNSWLKLGA 163 (336)
T ss_pred CceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCCC-----CCccchHHHHHHHHHHHhHHHHhCC
Confidence 3467999999753 211 22333333 3478999999999543333 234567777777766664 3
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhC------CCceeeEEEeccccch
Q 020067 111 EIPEWQVFGGSWGSTLALAYSLAH------PDKVTGLVLRGIFLLR 150 (331)
Q Consensus 111 ~~~~v~lvG~S~Gg~~a~~~a~~~------p~~v~~li~~~~~~~~ 150 (331)
+.++|+|+|-|.||.+|..+|.+. +.+++|.|++-|....
T Consensus 164 D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~ 209 (336)
T KOG1515|consen 164 DPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQG 209 (336)
T ss_pred CcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCC
Confidence 567899999999999999888763 3579999999987653
No 138
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=99.09 E-value=1.7e-10 Score=91.20 Aligned_cols=84 Identities=15% Similarity=0.071 Sum_probs=50.5
Q ss_pred ccccCCCCcEEEEecCCCCCCCCCCCCCC---ccchHHHH---------------HHHHHHHHHh------CCCcEEEEE
Q 020067 64 RRFFDPDFYRIILFDQRGAGKSTPHACLD---QNTTWDLI---------------DDIEKLRQHL------EIPEWQVFG 119 (331)
Q Consensus 64 ~~~~~~~g~~vi~~D~~G~G~s~~~~~~~---~~~~~~~~---------------~~~~~~~~~~------~~~~v~lvG 119 (331)
...++++||-|+++|.+|+|+........ .++.+.++ -|...+++.+ +.++|.++|
T Consensus 153 g~~LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~G 232 (390)
T PF12715_consen 153 GDQLAKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMG 232 (390)
T ss_dssp HHHHHTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEE
T ss_pred HHHHHhCCCEEEEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEe
Confidence 34466799999999999999876443211 11222221 1222344444 345899999
Q ss_pred eChhHHHHHHHHHhCCCceeeEEEecccc
Q 020067 120 GSWGSTLALAYSLAHPDKVTGLVLRGIFL 148 (331)
Q Consensus 120 ~S~Gg~~a~~~a~~~p~~v~~li~~~~~~ 148 (331)
+||||..++.+|+..+ +|++.|..+...
T Consensus 233 fSmGg~~a~~LaALDd-RIka~v~~~~l~ 260 (390)
T PF12715_consen 233 FSMGGYRAWWLAALDD-RIKATVANGYLC 260 (390)
T ss_dssp EGGGHHHHHHHHHH-T-T--EEEEES-B-
T ss_pred ecccHHHHHHHHHcch-hhHhHhhhhhhh
Confidence 9999999999999874 898888776543
No 139
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=99.03 E-value=2.4e-08 Score=83.66 Aligned_cols=129 Identities=18% Similarity=0.098 Sum_probs=85.7
Q ss_pred CccceeEeCCCceEEEEeC---CCCCCCcEEEeccCCCC------CCCCCccc---ccCCCCcEEEEecCCCCCCCCCCC
Q 020067 22 YSTGILKVSDIHTIYWEQS---GNPTGHPVVFLHGGPGG------GTTPSNRR---FFDPDFYRIILFDQRGAGKSTPHA 89 (331)
Q Consensus 22 ~~~~~~~~~~g~~l~~~~~---g~~~~~~vl~~HG~~~~------~~~~~~~~---~~~~~g~~vi~~D~~G~G~s~~~~ 89 (331)
.....|...||.+|+-..+ +....|+++..+-++-. ........ .++++||.||..|.||.|.|++..
T Consensus 19 ~~~v~V~MRDGvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~SeG~~ 98 (563)
T COG2936 19 ERDVMVPMRDGVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEGVF 98 (563)
T ss_pred eeeeeEEecCCeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCCccc
Confidence 3456788899999985544 33345677777722211 11122333 578899999999999999999765
Q ss_pred CCCcc-chHHHHHHHHHHHHH-hCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccch
Q 020067 90 CLDQN-TTWDLIDDIEKLRQH-LEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLR 150 (331)
Q Consensus 90 ~~~~~-~~~~~~~~~~~~~~~-~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~ 150 (331)
..... ..+|-.+.|..+.++ ....+|..+|.|++|...+.+|+..|..+++++...+....
T Consensus 99 ~~~~~~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D~ 161 (563)
T COG2936 99 DPESSREAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVDR 161 (563)
T ss_pred ceeccccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeeccccccccc
Confidence 32222 222222223222221 12358999999999999999999998889999888876653
No 140
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=99.02 E-value=2.6e-10 Score=94.20 Aligned_cols=92 Identities=13% Similarity=-0.044 Sum_probs=69.3
Q ss_pred CCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCc
Q 020067 58 GTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDK 137 (331)
Q Consensus 58 ~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~ 137 (331)
..|..++..+.+.||.+ ..|++|+|.+.+........++++.+.++++.+..+.++++|+||||||.++..++..+|+.
T Consensus 108 ~~~~~li~~L~~~GY~~-~~dL~g~gYDwR~~~~~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~~p~~ 186 (440)
T PLN02733 108 YYFHDMIEQLIKWGYKE-GKTLFGFGYDFRQSNRLPETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSLHSDV 186 (440)
T ss_pred HHHHHHHHHHHHcCCcc-CCCcccCCCCccccccHHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHHCCHh
Confidence 44556777777888755 89999999987654211233455666666666677788999999999999999999988863
Q ss_pred ----eeeEEEeccccch
Q 020067 138 ----VTGLVLRGIFLLR 150 (331)
Q Consensus 138 ----v~~li~~~~~~~~ 150 (331)
|+++|.++++...
T Consensus 187 ~~k~I~~~I~la~P~~G 203 (440)
T PLN02733 187 FEKYVNSWIAIAAPFQG 203 (440)
T ss_pred HHhHhccEEEECCCCCC
Confidence 7899999876554
No 141
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.01 E-value=2.1e-08 Score=76.61 Aligned_cols=100 Identities=13% Similarity=0.074 Sum_probs=77.3
Q ss_pred CcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhC-CCcEEEEEeChhH
Q 020067 46 HPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLE-IPEWQVFGGSWGS 124 (331)
Q Consensus 46 ~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~lvG~S~Gg 124 (331)
|++.++|+..|....+......+.....|+..+.||.|.-... ..+++++++...+-+.... ..+++|+|||+||
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~~~~v~~l~a~g~~~~~~~----~~~l~~~a~~yv~~Ir~~QP~GPy~L~G~S~GG 76 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGPLLPVYGLQAPGYGAGEQP----FASLDDMAAAYVAAIRRVQPEGPYVLLGWSLGG 76 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhccCceeeccccCcccccccc----cCCHHHHHHHHHHHHHHhCCCCCEEEEeecccc
Confidence 5799999976664444433333455699999999999863332 3578999998877777775 4599999999999
Q ss_pred HHHHHHHHhC---CCceeeEEEeccccc
Q 020067 125 TLALAYSLAH---PDKVTGLVLRGIFLL 149 (331)
Q Consensus 125 ~~a~~~a~~~---p~~v~~li~~~~~~~ 149 (331)
.+|...|.+- .+.|..++++++...
T Consensus 77 ~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 77 AVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred HHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 9999999864 457999999998776
No 142
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=99.00 E-value=6.8e-10 Score=90.72 Aligned_cols=104 Identities=16% Similarity=0.192 Sum_probs=55.3
Q ss_pred CCCcEEEeccCCCCC-CCCCcccccCCCCcEEEEecCCCCCCC-C-C--CC-----C-------------CC----ccch
Q 020067 44 TGHPVVFLHGGPGGG-TTPSNRRFFDPDFYRIILFDQRGAGKS-T-P--HA-----C-------------LD----QNTT 96 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~-~~~~~~~~~~~~g~~vi~~D~~G~G~s-~-~--~~-----~-------------~~----~~~~ 96 (331)
.-|+|||-||.+++. .+...+..++++||-|+++|+|..-.+ . . .. . .. ....
T Consensus 99 ~~PvvIFSHGlgg~R~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (379)
T PF03403_consen 99 KFPVVIFSHGLGGSRTSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEEEF 178 (379)
T ss_dssp -EEEEEEE--TT--TTTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGGHH
T ss_pred CCCEEEEeCCCCcchhhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchhHH
Confidence 347899999977664 456677889999999999999953211 0 0 00 0 00 0000
Q ss_pred -------HHHHHHHHHHHHHh--------------------------CCCcEEEEEeChhHHHHHHHHHhCCCceeeEEE
Q 020067 97 -------WDLIDDIEKLRQHL--------------------------EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVL 143 (331)
Q Consensus 97 -------~~~~~~~~~~~~~~--------------------------~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~ 143 (331)
+.-++++..+++.+ +.+++.++|||+||..++.++... .++++.|+
T Consensus 179 ~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r~~~~I~ 257 (379)
T PF03403_consen 179 ELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TRFKAGIL 257 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT--EEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cCcceEEE
Confidence 11122333333222 234799999999999999988876 57999999
Q ss_pred ecccc
Q 020067 144 RGIFL 148 (331)
Q Consensus 144 ~~~~~ 148 (331)
+++..
T Consensus 258 LD~W~ 262 (379)
T PF03403_consen 258 LDPWM 262 (379)
T ss_dssp ES---
T ss_pred eCCcc
Confidence 99843
No 143
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.99 E-value=4.2e-09 Score=81.17 Aligned_cols=122 Identities=21% Similarity=0.144 Sum_probs=78.6
Q ss_pred cceeEeCCCc---eEEEEeCCC--CCCC-cEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchH
Q 020067 24 TGILKVSDIH---TIYWEQSGN--PTGH-PVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTW 97 (331)
Q Consensus 24 ~~~~~~~~g~---~l~~~~~g~--~~~~-~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~ 97 (331)
...+.+.||- ++.....++ +++. .||++-|..+--. -.....-++.||.|+.+++||++.|...+.. ..+..
T Consensus 216 R~kiks~dgneiDtmF~d~r~n~~~ngq~LvIC~EGNAGFYE-vG~m~tP~~lgYsvLGwNhPGFagSTG~P~p-~n~~n 293 (517)
T KOG1553|consen 216 RLKIKSSDGNEIDTMFLDGRPNQSGNGQDLVICFEGNAGFYE-VGVMNTPAQLGYSVLGWNHPGFAGSTGLPYP-VNTLN 293 (517)
T ss_pred EEEEeecCCcchhheeecCCCCCCCCCceEEEEecCCccceE-eeeecChHHhCceeeccCCCCccccCCCCCc-ccchH
Confidence 3345555553 334433332 2334 4667666433211 1233334468999999999999999876631 22333
Q ss_pred HHHHHHHHHHHHhCC--CcEEEEEeChhHHHHHHHHHhCCCceeeEEEecccc
Q 020067 98 DLIDDIEKLRQHLEI--PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFL 148 (331)
Q Consensus 98 ~~~~~~~~~~~~~~~--~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~ 148 (331)
.+-..++-.+..++. +.+++.|||.||..+..+|..+|+ |+++|+-++.-
T Consensus 294 A~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPd-VkavvLDAtFD 345 (517)
T KOG1553|consen 294 AADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPD-VKAVVLDATFD 345 (517)
T ss_pred HHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCC-ceEEEeecchh
Confidence 333334445677775 579999999999999999999996 99999887643
No 144
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.91 E-value=1.8e-09 Score=80.57 Aligned_cols=88 Identities=18% Similarity=0.209 Sum_probs=52.3
Q ss_pred CcEEEeccCCC--CCCCCCcccccCCCCcE---EEEecCCCCCCCCCCCC--CCccchHHHHHHHHHHHHHhCCCcEEEE
Q 020067 46 HPVVFLHGGPG--GGTTPSNRRFFDPDFYR---IILFDQRGAGKSTPHAC--LDQNTTWDLIDDIEKLRQHLEIPEWQVF 118 (331)
Q Consensus 46 ~~vl~~HG~~~--~~~~~~~~~~~~~~g~~---vi~~D~~G~G~s~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~lv 118 (331)
.||||+||..+ ...|......|.++||. |+++++-....+..... ....+..++++-|..+++.-+. +|.||
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TGa-kVDIV 80 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTGA-KVDIV 80 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT---EEEE
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhCC-EEEEE
Confidence 47999999554 35577788888899999 89999854433221110 0012234566666677777788 99999
Q ss_pred EeChhHHHHHHHHHhC
Q 020067 119 GGSWGSTLALAYSLAH 134 (331)
Q Consensus 119 G~S~Gg~~a~~~a~~~ 134 (331)
||||||.++-.+....
T Consensus 81 gHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 81 GHSMGGTIARYYIKGG 96 (219)
T ss_dssp EETCHHHHHHHHHHHC
T ss_pred EcCCcCHHHHHHHHHc
Confidence 9999999988887643
No 145
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=98.89 E-value=4.8e-08 Score=74.32 Aligned_cols=80 Identities=15% Similarity=0.073 Sum_probs=58.4
Q ss_pred cccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHH-HHhCCCcEEEEEeChhHHHHHHHHHh---CCCceee
Q 020067 65 RFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLR-QHLEIPEWQVFGGSWGSTLALAYSLA---HPDKVTG 140 (331)
Q Consensus 65 ~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~lvG~S~Gg~~a~~~a~~---~p~~v~~ 140 (331)
...+...+.|+++|.+|++.+.... .+.+++++.+...+ +.....+++++|||+||.++...+.. .++.+.+
T Consensus 19 ~~~l~~~~~v~~~~~~g~~~~~~~~----~~~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~~a~~~a~~l~~~~~~~~~ 94 (212)
T smart00824 19 AAALRGRRDVSALPLPGFGPGEPLP----ASADALVEAQAEAVLRAAGGRPFVLVGHSSGGLLAHAVAARLEARGIPPAA 94 (212)
T ss_pred HHhcCCCccEEEecCCCCCCCCCCC----CCHHHHHHHHHHHHHHhcCCCCeEEEEECHHHHHHHHHHHHHHhCCCCCcE
Confidence 3333567899999999998765432 35666666554443 44445789999999999999988886 3567899
Q ss_pred EEEecccc
Q 020067 141 LVLRGIFL 148 (331)
Q Consensus 141 li~~~~~~ 148 (331)
++++++..
T Consensus 95 l~~~~~~~ 102 (212)
T smart00824 95 VVLLDTYP 102 (212)
T ss_pred EEEEccCC
Confidence 99887644
No 146
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.88 E-value=6.6e-10 Score=88.84 Aligned_cols=106 Identities=15% Similarity=0.126 Sum_probs=61.8
Q ss_pred CCCCcEEEeccCCCCC-C--C-CCccccc-CC--CCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHH----Hh-
Q 020067 43 PTGHPVVFLHGGPGGG-T--T-PSNRRFF-DP--DFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQ----HL- 110 (331)
Q Consensus 43 ~~~~~vl~~HG~~~~~-~--~-~~~~~~~-~~--~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~----~~- 110 (331)
++.|++|++|||.++. . | ......+ .. .++.||++|+...-...-.. .......+.+.+..+++ ..
T Consensus 69 ~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~Y~~--a~~n~~~vg~~la~~l~~L~~~~g 146 (331)
T PF00151_consen 69 PSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNNYPQ--AVANTRLVGRQLAKFLSFLINNFG 146 (331)
T ss_dssp TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-HHH--HHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred CCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccccccc--hhhhHHHHHHHHHHHHHHHHhhcC
Confidence 4678999999987765 2 2 2233333 33 58999999996322110000 00122333344444333 33
Q ss_pred -CCCcEEEEEeChhHHHHHHHHHhCCC--ceeeEEEeccccch
Q 020067 111 -EIPEWQVFGGSWGSTLALAYSLAHPD--KVTGLVLRGIFLLR 150 (331)
Q Consensus 111 -~~~~v~lvG~S~Gg~~a~~~a~~~p~--~v~~li~~~~~~~~ 150 (331)
..++++|+|||+||.+|-.++..... ++..++.++|+.+.
T Consensus 147 ~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP~ 189 (331)
T PF00151_consen 147 VPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGPL 189 (331)
T ss_dssp --GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-TT
T ss_pred CChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCccccc
Confidence 45689999999999999999998877 89999999997764
No 147
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.82 E-value=3.2e-07 Score=67.77 Aligned_cols=106 Identities=15% Similarity=0.069 Sum_probs=72.1
Q ss_pred CCCCcEEEeccCCCCCCC-CCcccccCC---CCcEEEEecCCCCCCCC---CCC----CCCccchHHHHHHHHHHHHHhC
Q 020067 43 PTGHPVVFLHGGPGGGTT-PSNRRFFDP---DFYRIILFDQRGAGKST---PHA----CLDQNTTWDLIDDIEKLRQHLE 111 (331)
Q Consensus 43 ~~~~~vl~~HG~~~~~~~-~~~~~~~~~---~g~~vi~~D~~G~G~s~---~~~----~~~~~~~~~~~~~~~~~~~~~~ 111 (331)
.+++.+++++|.+|...+ ..+...+.. +.+.++.+-..||-.-+ ... ..+-++++++++.-.++++..-
T Consensus 27 ~~~~li~~IpGNPG~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik~~~ 106 (301)
T KOG3975|consen 27 EDKPLIVWIPGNPGLLGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIKEYV 106 (301)
T ss_pred CCceEEEEecCCCCchhHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHHHhC
Confidence 356778999998887554 333333322 33668888888876443 111 1134678888887777777653
Q ss_pred --CCcEEEEEeChhHHHHHHHHHhCC--CceeeEEEecccc
Q 020067 112 --IPEWQVFGGSWGSTLALAYSLAHP--DKVTGLVLRGIFL 148 (331)
Q Consensus 112 --~~~v~lvG~S~Gg~~a~~~a~~~p--~~v~~li~~~~~~ 148 (331)
..+++++|||-|+++.+....... -.|.+++++-|..
T Consensus 107 Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTI 147 (301)
T KOG3975|consen 107 PKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTI 147 (301)
T ss_pred CCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchH
Confidence 358999999999999999887432 2578888877654
No 148
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=98.80 E-value=5.4e-07 Score=71.85 Aligned_cols=127 Identities=17% Similarity=0.105 Sum_probs=76.1
Q ss_pred ccceeEeCCCceEEEEeCC--CCCCCcEEEeccCCCCCCCC----CcccccCCCCcEEEEecCCC--CCCCCC-------
Q 020067 23 STGILKVSDIHTIYWEQSG--NPTGHPVVFLHGGPGGGTTP----SNRRFFDPDFYRIILFDQRG--AGKSTP------- 87 (331)
Q Consensus 23 ~~~~~~~~~g~~l~~~~~g--~~~~~~vl~~HG~~~~~~~~----~~~~~~~~~g~~vi~~D~~G--~G~s~~------- 87 (331)
+...+...+..-+..+... ....-.||++||.+.+..|. .+...+-..|+..+++.+|. ......
T Consensus 63 e~~~L~~~~~~flaL~~~~~~~~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~ 142 (310)
T PF12048_consen 63 EVQWLQAGEERFLALWRPANSAKPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEE 142 (310)
T ss_pred hcEEeecCCEEEEEEEecccCCCCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCC
Confidence 3445555444333333222 11223799999987776663 34455667999999999887 110000
Q ss_pred ---CC--CCCc-------------cc----hHHHHHHHHHH---HHHhCCCcEEEEEeChhHHHHHHHHHhCCC-ceeeE
Q 020067 88 ---HA--CLDQ-------------NT----TWDLIDDIEKL---RQHLEIPEWQVFGGSWGSTLALAYSLAHPD-KVTGL 141 (331)
Q Consensus 88 ---~~--~~~~-------------~~----~~~~~~~~~~~---~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~-~v~~l 141 (331)
.. .... .. .+.+.+-+.++ ....+..+++|+||+.|+..++.+....+. .+.++
T Consensus 143 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daL 222 (310)
T PF12048_consen 143 VPSAGDQQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKPPPMPDAL 222 (310)
T ss_pred CCCCCCCCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCCCcccCeE
Confidence 00 0000 00 11233333333 334455679999999999999999998864 58999
Q ss_pred EEeccccc
Q 020067 142 VLRGIFLL 149 (331)
Q Consensus 142 i~~~~~~~ 149 (331)
|++++...
T Consensus 223 V~I~a~~p 230 (310)
T PF12048_consen 223 VLINAYWP 230 (310)
T ss_pred EEEeCCCC
Confidence 99998544
No 149
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.75 E-value=1.5e-06 Score=67.87 Aligned_cols=86 Identities=17% Similarity=0.179 Sum_probs=61.8
Q ss_pred CCCcEEEeccCCCCCCC--------CCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhC----
Q 020067 44 TGHPVVFLHGGPGGGTT--------PSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLE---- 111 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~~--------~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~---- 111 (331)
+...||++-|.++.-.. ..+.......+-+|+.+++||.|.|.+.. +.++++.|-.+.++.+.
T Consensus 136 ~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~-----s~~dLv~~~~a~v~yL~d~~~ 210 (365)
T PF05677_consen 136 PQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPP-----SRKDLVKDYQACVRYLRDEEQ 210 (365)
T ss_pred CCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCC-----CHHHHHHHHHHHHHHHHhccc
Confidence 45678999885443111 11222233478999999999999998665 45788888777776662
Q ss_pred ---CCcEEEEEeChhHHHHHHHHHhC
Q 020067 112 ---IPEWQVFGGSWGSTLALAYSLAH 134 (331)
Q Consensus 112 ---~~~v~lvG~S~Gg~~a~~~a~~~ 134 (331)
.+++++.|||+||.++..++..+
T Consensus 211 G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 211 GPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred CCChheEEEeeccccHHHHHHHHHhc
Confidence 25799999999999999877665
No 150
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.75 E-value=3.1e-08 Score=82.07 Aligned_cols=68 Identities=16% Similarity=0.276 Sum_probs=51.8
Q ss_pred hccccccccEEEEecCCCCccCCcchHHHHHhC-CCCcEEEecCCCCCCCcCC------------chhHHHHHHHHHHHh
Q 020067 260 NIDNIRHINATIVQGRYDVCCPMMSAWDLHKAW-PEADFKVVADAGHSANEPG------------IAAELVATNEKLKNL 326 (331)
Q Consensus 260 ~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~------------~~~~~~~~i~~fl~~ 326 (331)
.+-.+ +.|+||+.|.+|..++++..+.+.++. ...+++++.+++|.+-... .-..++++|.+|+..
T Consensus 299 ~Lldm-k~PVLFV~Gsnd~mcspn~ME~vreKMqA~~elhVI~~adhsmaipk~k~esegltqseVd~~i~~aI~efvt~ 377 (784)
T KOG3253|consen 299 ALLDM-KQPVLFVIGSNDHMCSPNSMEEVREKMQAEVELHVIGGADHSMAIPKRKVESEGLTQSEVDSAIAQAIKEFVTI 377 (784)
T ss_pred hhHhc-CCceEEEecCCcccCCHHHHHHHHHHhhccceEEEecCCCccccCCccccccccccHHHHHHHHHHHHHHHHHH
Confidence 45556 599999999999999999999999988 4688999999999874321 123356666666665
Q ss_pred hh
Q 020067 327 IK 328 (331)
Q Consensus 327 ~~ 328 (331)
.+
T Consensus 378 ~l 379 (784)
T KOG3253|consen 378 AL 379 (784)
T ss_pred hh
Confidence 44
No 151
>PLN02209 serine carboxypeptidase
Probab=98.69 E-value=1.3e-05 Score=67.14 Aligned_cols=129 Identities=19% Similarity=0.274 Sum_probs=77.6
Q ss_pred CccceeEeCC--CceEEEEeCC----CCCCCcEEEeccCCCCCCCCC-------cc-c---------ccC------CCCc
Q 020067 22 YSTGILKVSD--IHTIYWEQSG----NPTGHPVVFLHGGPGGGTTPS-------NR-R---------FFD------PDFY 72 (331)
Q Consensus 22 ~~~~~~~~~~--g~~l~~~~~g----~~~~~~vl~~HG~~~~~~~~~-------~~-~---------~~~------~~g~ 72 (331)
....++++.+ +..++|+-.. +.+.|.|+++.||+|.+.... .. . .+. .+-.
T Consensus 39 ~~sGy~~v~~~~~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~a 118 (437)
T PLN02209 39 LETGYIGIGEEENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTA 118 (437)
T ss_pred EEEEEEEecCCCCeEEEEEEEecCCCCCCCCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCCchhhcC
Confidence 3456777754 4567765433 234688999999987654321 10 0 111 1446
Q ss_pred EEEEecC-CCCCCCCCCCCCCccchHHHHHHHHHHHHH----h---CCCcEEEEEeChhHHHHHHHHHhC----------
Q 020067 73 RIILFDQ-RGAGKSTPHACLDQNTTWDLIDDIEKLRQH----L---EIPEWQVFGGSWGSTLALAYSLAH---------- 134 (331)
Q Consensus 73 ~vi~~D~-~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~----~---~~~~v~lvG~S~Gg~~a~~~a~~~---------- 134 (331)
+++-+|. .|.|.|.........+.++.++++..++.. . ...+++|.|.|+||..+..+|..-
T Consensus 119 nllfiDqPvGtGfSy~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~ 198 (437)
T PLN02209 119 NIIFLDQPVGSGFSYSKTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNP 198 (437)
T ss_pred cEEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCC
Confidence 7999995 488988643321112222334555555443 2 235899999999998777666531
Q ss_pred CCceeeEEEeccccch
Q 020067 135 PDKVTGLVLRGIFLLR 150 (331)
Q Consensus 135 p~~v~~li~~~~~~~~ 150 (331)
+-.++|+++.++...+
T Consensus 199 ~inl~Gi~igng~td~ 214 (437)
T PLN02209 199 PINLQGYVLGNPITHI 214 (437)
T ss_pred ceeeeeEEecCcccCh
Confidence 1257899998886654
No 152
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=98.67 E-value=7.9e-06 Score=68.29 Aligned_cols=130 Identities=18% Similarity=0.234 Sum_probs=77.0
Q ss_pred CCccceeEeCC--CceEEEEeCC----CCCCCcEEEeccCCCCCCCC-------Ccc----------cccC------CCC
Q 020067 21 PYSTGILKVSD--IHTIYWEQSG----NPTGHPVVFLHGGPGGGTTP-------SNR----------RFFD------PDF 71 (331)
Q Consensus 21 ~~~~~~~~~~~--g~~l~~~~~g----~~~~~~vl~~HG~~~~~~~~-------~~~----------~~~~------~~g 71 (331)
.....++++.+ +..++|+-.. +.+.|.||++.||+|.+... ... ..+. .+-
T Consensus 36 ~~~sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~ 115 (433)
T PLN03016 36 ELETGYIGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKM 115 (433)
T ss_pred eEEEEEEEecCCCCeEEEEEEEecCCCcccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhhc
Confidence 34467888864 4567776432 23568899999998754421 110 0111 145
Q ss_pred cEEEEecC-CCCCCCCCCCCCCccchHHHHHHHHHHHH----Hh---CCCcEEEEEeChhHHHHHHHHHhC---------
Q 020067 72 YRIILFDQ-RGAGKSTPHACLDQNTTWDLIDDIEKLRQ----HL---EIPEWQVFGGSWGSTLALAYSLAH--------- 134 (331)
Q Consensus 72 ~~vi~~D~-~G~G~s~~~~~~~~~~~~~~~~~~~~~~~----~~---~~~~v~lvG~S~Gg~~a~~~a~~~--------- 134 (331)
..++-+|. -|.|.|.........+-.+.++++..++. .. ...+++|.|.|+||..+..+|..-
T Consensus 116 anllfiDqPvGtGfSy~~~~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~ 195 (433)
T PLN03016 116 ANIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCE 195 (433)
T ss_pred CcEEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccC
Confidence 78999995 58998864331111111122344444433 32 335899999999998777666531
Q ss_pred -CCceeeEEEeccccch
Q 020067 135 -PDKVTGLVLRGIFLLR 150 (331)
Q Consensus 135 -p~~v~~li~~~~~~~~ 150 (331)
+-.++|+++-++...+
T Consensus 196 ~~inLkGi~iGNg~t~~ 212 (433)
T PLN03016 196 PPINLQGYMLGNPVTYM 212 (433)
T ss_pred CcccceeeEecCCCcCc
Confidence 1257899998886543
No 153
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.66 E-value=5.9e-07 Score=68.45 Aligned_cols=125 Identities=22% Similarity=0.214 Sum_probs=80.2
Q ss_pred ccceeEeCCCceEEEE---eCCCCC-CCcEEEeccCCCCCC-C---CCcccccCCCCcEEEEecCC-------CCCCCCC
Q 020067 23 STGILKVSDIHTIYWE---QSGNPT-GHPVVFLHGGPGGGT-T---PSNRRFFDPDFYRIILFDQR-------GAGKSTP 87 (331)
Q Consensus 23 ~~~~~~~~~g~~l~~~---~~g~~~-~~~vl~~HG~~~~~~-~---~~~~~~~~~~g~~vi~~D~~-------G~G~s~~ 87 (331)
+...+..+++ +..|+ ..+.++ .|.||.+||..++.. . ..+-......||-|+.+|-- +.|.+..
T Consensus 36 ~~~s~~~~g~-~r~y~l~vP~g~~~~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~ 114 (312)
T COG3509 36 SVASFDVNGL-KRSYRLYVPPGLPSGAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFG 114 (312)
T ss_pred CccccccCCC-ccceEEEcCCCCCCCCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcCccccccCCCcccccCC
Confidence 3455566555 44433 333333 357899999665532 2 12223333589999999532 2233321
Q ss_pred CC--CCCccchHHHHHHHHHHHHHhCCC--cEEEEEeChhHHHHHHHHHhCCCceeeEEEecccc
Q 020067 88 HA--CLDQNTTWDLIDDIEKLRQHLEIP--EWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFL 148 (331)
Q Consensus 88 ~~--~~~~~~~~~~~~~~~~~~~~~~~~--~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~ 148 (331)
+. .....+...+.+.+..++.+.+++ +|++.|.|-||.++..++..+|+.+.++..+++..
T Consensus 115 p~~~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 115 PADRRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred cccccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 21 112234455666667777777776 89999999999999999999999999999888755
No 154
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=98.66 E-value=2.6e-05 Score=64.80 Aligned_cols=132 Identities=16% Similarity=0.159 Sum_probs=82.6
Q ss_pred CCCccceeEeC--CCceEEEEeCC----CCCCCcEEEeccCCCCCCCCCccccc----C--------------CCCcEEE
Q 020067 20 EPYSTGILKVS--DIHTIYWEQSG----NPTGHPVVFLHGGPGGGTTPSNRRFF----D--------------PDFYRII 75 (331)
Q Consensus 20 ~~~~~~~~~~~--~g~~l~~~~~g----~~~~~~vl~~HG~~~~~~~~~~~~~~----~--------------~~g~~vi 75 (331)
......++.++ .++.++|+-.. +.+.|.||.+.||+|-+.......++ . .+--.++
T Consensus 42 f~~ysGYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiL 121 (454)
T KOG1282|consen 42 FKQYSGYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLGGLFEENGPFRVKYNGKTLYLNPYSWNKEANIL 121 (454)
T ss_pred cccccceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchhhhhhhcCCeEEcCCCCcceeCCccccccccEE
Confidence 34446788887 57789887443 34578899999998754432111110 0 1335688
Q ss_pred EecCC-CCCCCCCCCCC-CccchHHHHHHHHHHHH----Hh---CCCcEEEEEeChhHHHHHHHHHh----C------CC
Q 020067 76 LFDQR-GAGKSTPHACL-DQNTTWDLIDDIEKLRQ----HL---EIPEWQVFGGSWGSTLALAYSLA----H------PD 136 (331)
Q Consensus 76 ~~D~~-G~G~s~~~~~~-~~~~~~~~~~~~~~~~~----~~---~~~~v~lvG~S~Gg~~a~~~a~~----~------p~ 136 (331)
-+|.| |.|.|-..... ...+-+..++|...++. +. ..++++|.|-|++|...-.+|.. . +-
T Consensus 122 fLd~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~i 201 (454)
T KOG1282|consen 122 FLDQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNI 201 (454)
T ss_pred EEecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcc
Confidence 88888 78888644321 11244455566555443 22 34689999999999877777653 1 12
Q ss_pred ceeeEEEeccccchh
Q 020067 137 KVTGLVLRGIFLLRK 151 (331)
Q Consensus 137 ~v~~li~~~~~~~~~ 151 (331)
.++|+++-++.....
T Consensus 202 NLkG~~IGNg~td~~ 216 (454)
T KOG1282|consen 202 NLKGYAIGNGLTDPE 216 (454)
T ss_pred cceEEEecCcccCcc
Confidence 578998888876644
No 155
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.66 E-value=2.2e-07 Score=67.31 Aligned_cols=100 Identities=20% Similarity=0.253 Sum_probs=71.6
Q ss_pred CcEEEeccCCCCC----CCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCC----CcEEE
Q 020067 46 HPVVFLHGGPGGG----TTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEI----PEWQV 117 (331)
Q Consensus 46 ~~vl~~HG~~~~~----~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~v~l 117 (331)
..|||+-|.+..- ....+..++.+.+|.++-+.++.+- ..+...++.+-++|+..++++++. ..|+|
T Consensus 37 ~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy-----~G~Gt~slk~D~edl~~l~~Hi~~~~fSt~vVL 111 (299)
T KOG4840|consen 37 VKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSY-----NGYGTFSLKDDVEDLKCLLEHIQLCGFSTDVVL 111 (299)
T ss_pred EEEEEEcccCCCccccccHHHHHHHHhhccceeeeeeccccc-----cccccccccccHHHHHHHHHHhhccCcccceEE
Confidence 4588888855432 2245677778899999999887421 111234677778999999998753 37999
Q ss_pred EEeChhHHHHHHHHHh--CCCceeeEEEeccccch
Q 020067 118 FGGSWGSTLALAYSLA--HPDKVTGLVLRGIFLLR 150 (331)
Q Consensus 118 vG~S~Gg~~a~~~a~~--~p~~v~~li~~~~~~~~ 150 (331)
+|||.|+.=.+.+... .+..+.+.|+.+|....
T Consensus 112 ~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSDr 146 (299)
T KOG4840|consen 112 VGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSDR 146 (299)
T ss_pred EecCccchHHHHHHHhccchHHHHHHHHhCccchh
Confidence 9999999988888743 35568888888876653
No 156
>COG3150 Predicted esterase [General function prediction only]
Probab=98.64 E-value=3.2e-07 Score=63.35 Aligned_cols=90 Identities=21% Similarity=0.171 Sum_probs=62.4
Q ss_pred EEEeccCCCCCCCCC--cccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCcEEEEEeChhHH
Q 020067 48 VVFLHGGPGGGTTPS--NRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGST 125 (331)
Q Consensus 48 vl~~HG~~~~~~~~~--~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~ 125 (331)
||++|||-+|..... ....+.. .|.|-.+.+.+.. ..+....++.+..++...+.+...|+|-|+||+
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~-------~~~~~i~y~~p~l---~h~p~~a~~ele~~i~~~~~~~p~ivGssLGGY 71 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFID-------EDVRDIEYSTPHL---PHDPQQALKELEKAVQELGDESPLIVGSSLGGY 71 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHh-------ccccceeeecCCC---CCCHHHHHHHHHHHHHHcCCCCceEEeecchHH
Confidence 899999877755432 1222222 2333333343332 346788899999999999988899999999999
Q ss_pred HHHHHHHhCCCceeeEEEeccccch
Q 020067 126 LALAYSLAHPDKVTGLVLRGIFLLR 150 (331)
Q Consensus 126 ~a~~~a~~~p~~v~~li~~~~~~~~ 150 (331)
.|..++.++. ++ .|+++|...+
T Consensus 72 ~At~l~~~~G--ir-av~~NPav~P 93 (191)
T COG3150 72 YATWLGFLCG--IR-AVVFNPAVRP 93 (191)
T ss_pred HHHHHHHHhC--Ch-hhhcCCCcCc
Confidence 9999999985 44 4556776654
No 157
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=98.62 E-value=1.6e-06 Score=69.90 Aligned_cols=67 Identities=22% Similarity=0.222 Sum_probs=56.1
Q ss_pred hhccccccccEEEEecCCCCccCCcchHHHHHhCCC-CcEEEecCCCCCCCcCCchhHHHHHHHHHHHhhhcC
Q 020067 259 DNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPE-ADFKVVADAGHSANEPGIAAELVATNEKLKNLIKNG 330 (331)
Q Consensus 259 ~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~~~ 330 (331)
....++ ++|.++|.|..|++..+.....+.+.+|+ ..+..+|+++|.... ..+.+.|..|+..+..+
T Consensus 256 ~Y~~rL-~~PK~ii~atgDeFf~pD~~~~y~d~L~G~K~lr~vPN~~H~~~~----~~~~~~l~~f~~~~~~~ 323 (367)
T PF10142_consen 256 SYRDRL-TMPKYIINATGDEFFVPDSSNFYYDKLPGEKYLRYVPNAGHSLIG----SDVVQSLRAFYNRIQNG 323 (367)
T ss_pred HHHHhc-CccEEEEecCCCceeccCchHHHHhhCCCCeeEEeCCCCCcccch----HHHHHHHHHHHHHHHcC
Confidence 344666 69999999999999999999999999985 667888999999854 56788899999887544
No 158
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=98.61 E-value=2.3e-06 Score=63.25 Aligned_cols=81 Identities=17% Similarity=0.025 Sum_probs=51.3
Q ss_pred CCcEEEeccCCCCCCCCCcccccCCCCcE-EEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCcEEEEEeChh
Q 020067 45 GHPVVFLHGGPGGGTTPSNRRFFDPDFYR-IILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWG 123 (331)
Q Consensus 45 ~~~vl~~HG~~~~~~~~~~~~~~~~~g~~-vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG~S~G 123 (331)
+..|||..||+.+........ +..++. ++++|+|..- ++. | --+.+++.|||+|||
T Consensus 11 ~~LilfF~GWg~d~~~f~hL~--~~~~~D~l~~yDYr~l~------------~d~---~------~~~y~~i~lvAWSmG 67 (213)
T PF04301_consen 11 KELILFFAGWGMDPSPFSHLI--LPENYDVLICYDYRDLD------------FDF---D------LSGYREIYLVAWSMG 67 (213)
T ss_pred CeEEEEEecCCCChHHhhhcc--CCCCccEEEEecCcccc------------ccc---c------cccCceEEEEEEeHH
Confidence 467899999877655433221 123444 5677887321 110 1 124579999999999
Q ss_pred HHHHHHHHHhCCCceeeEEEeccccch
Q 020067 124 STLALAYSLAHPDKVTGLVLRGIFLLR 150 (331)
Q Consensus 124 g~~a~~~a~~~p~~v~~li~~~~~~~~ 150 (331)
-++|..+....| ++..|++++...+
T Consensus 68 Vw~A~~~l~~~~--~~~aiAINGT~~P 92 (213)
T PF04301_consen 68 VWAANRVLQGIP--FKRAIAINGTPYP 92 (213)
T ss_pred HHHHHHHhccCC--cceeEEEECCCCC
Confidence 999988866543 6777777765543
No 159
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.60 E-value=1.1e-07 Score=72.72 Aligned_cols=105 Identities=13% Similarity=0.044 Sum_probs=65.3
Q ss_pred CCCcEEEeccCCCCCCC--CC--cccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHH----hCCCcE
Q 020067 44 TGHPVVFLHGGPGGGTT--PS--NRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQH----LEIPEW 115 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~~--~~--~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~v 115 (331)
++..+||+||+..+... .. .+...+...-.++.+.||+.|.-..... ...+...-..++..+++. .+.++|
T Consensus 17 ~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~-d~~~a~~s~~~l~~~L~~L~~~~~~~~I 95 (233)
T PF05990_consen 17 DKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFY-DRESARFSGPALARFLRDLARAPGIKRI 95 (233)
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhh-hhhhHHHHHHHHHHHHHHHHhccCCceE
Confidence 57789999998665221 11 1122222222899999998876322111 112333334445555544 356799
Q ss_pred EEEEeChhHHHHHHHHHhC----C-----CceeeEEEeccccc
Q 020067 116 QVFGGSWGSTLALAYSLAH----P-----DKVTGLVLRGIFLL 149 (331)
Q Consensus 116 ~lvG~S~Gg~~a~~~a~~~----p-----~~v~~li~~~~~~~ 149 (331)
+|++||||+.+.+.+.... + .++..+|+++|-..
T Consensus 96 ~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid 138 (233)
T PF05990_consen 96 HILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDID 138 (233)
T ss_pred EEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCC
Confidence 9999999999999886542 1 26788999887554
No 160
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.54 E-value=1.2e-06 Score=70.36 Aligned_cols=105 Identities=18% Similarity=0.153 Sum_probs=70.5
Q ss_pred CCCcEEEeccCCCCCCCCC-------cccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCcEE
Q 020067 44 TGHPVVFLHGGPGGGTTPS-------NRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQ 116 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~~~~-------~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 116 (331)
+.|.||++|||+-.-.... ....++. ...+++.|+.-...... ....+..+.+.++....+++..|.++|+
T Consensus 121 ~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~-~~SILvLDYsLt~~~~~-~~~yPtQL~qlv~~Y~~Lv~~~G~~nI~ 198 (374)
T PF10340_consen 121 SDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP-EVSILVLDYSLTSSDEH-GHKYPTQLRQLVATYDYLVESEGNKNII 198 (374)
T ss_pred CCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC-CCeEEEEeccccccccC-CCcCchHHHHHHHHHHHHHhccCCCeEE
Confidence 4688999999764322111 1111222 55899999875431111 1112356778888888889888999999
Q ss_pred EEEeChhHHHHHHHHHhC--C---CceeeEEEeccccch
Q 020067 117 VFGGSWGSTLALAYSLAH--P---DKVTGLVLRGIFLLR 150 (331)
Q Consensus 117 lvG~S~Gg~~a~~~a~~~--p---~~v~~li~~~~~~~~ 150 (331)
|+|-|.||.+++.+++.. + ...+++|+++|....
T Consensus 199 LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l 237 (374)
T PF10340_consen 199 LMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNL 237 (374)
T ss_pred EEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCC
Confidence 999999999999887542 1 236899999997654
No 161
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.47 E-value=6.3e-07 Score=74.43 Aligned_cols=103 Identities=14% Similarity=0.105 Sum_probs=62.2
Q ss_pred CCCcEEEeccCC--CCCCCCCcccccCCCC----cEEEEecCCCC-CCCCCCCCCCccchHHHHHHHHHHHHHh-----C
Q 020067 44 TGHPVVFLHGGP--GGGTTPSNRRFFDPDF----YRIILFDQRGA-GKSTPHACLDQNTTWDLIDDIEKLRQHL-----E 111 (331)
Q Consensus 44 ~~~~vl~~HG~~--~~~~~~~~~~~~~~~g----~~vi~~D~~G~-G~s~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 111 (331)
.-|+|+++||.. ........+..+.+.| ..++.+|..+. .++..... ...-...+++++.-.+++. +
T Consensus 208 ~~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~~R~~el~~-~~~f~~~l~~eLlP~I~~~y~~~~d 286 (411)
T PRK10439 208 ERPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAIDTTHRSQELPC-NADFWLAVQQELLPQVRAIAPFSDD 286 (411)
T ss_pred CCCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCCcccccccCCc-hHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 347788999943 2222222333333444 34677775321 11111110 1111233456665556543 3
Q ss_pred CCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccc
Q 020067 112 IPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIF 147 (331)
Q Consensus 112 ~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~ 147 (331)
.++.+|+|+||||+.++.++.++|+++.+++.+++.
T Consensus 287 ~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs 322 (411)
T PRK10439 287 ADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGS 322 (411)
T ss_pred ccceEEEEEChHHHHHHHHHHhCcccccEEEEeccc
Confidence 357899999999999999999999999999999975
No 162
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=98.47 E-value=2.9e-06 Score=65.79 Aligned_cols=59 Identities=8% Similarity=-0.004 Sum_probs=50.7
Q ss_pred cccEEEEecCCCCccCCcchHHHHHhCC----CCcEEEecCCCCCCCcCCchhHHHHHHHHHH
Q 020067 266 HINATIVQGRYDVCCPMMSAWDLHKAWP----EADFKVVADAGHSANEPGIAAELVATNEKLK 324 (331)
Q Consensus 266 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl 324 (331)
.+|-|+++++.|.+++.+..+++.+... +++...++++.|..|....|+++.+.+.+|+
T Consensus 178 ~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 178 RCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred CCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 4899999999999999988887776552 3677788999999998777999999999985
No 163
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.46 E-value=5.8e-07 Score=72.75 Aligned_cols=103 Identities=17% Similarity=0.154 Sum_probs=76.2
Q ss_pred CCcEEEeccCCCC-CCCCCcccccCCCCcE---EEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCcEEEEEe
Q 020067 45 GHPVVFLHGGPGG-GTTPSNRRFFDPDFYR---IILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGG 120 (331)
Q Consensus 45 ~~~vl~~HG~~~~-~~~~~~~~~~~~~g~~---vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG~ 120 (331)
.-+++++||+..+ ..+......+...|+. ++.+++++-. .... .....+.+...+.+++...+.+++.++||
T Consensus 59 ~~pivlVhG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~---~~~~~~ql~~~V~~~l~~~ga~~v~LigH 134 (336)
T COG1075 59 KEPIVLVHGLGGGYGNFLPLDYRLAILGWLTNGVYAFELSGGD-GTYS---LAVRGEQLFAYVDEVLAKTGAKKVNLIGH 134 (336)
T ss_pred CceEEEEccCcCCcchhhhhhhhhcchHHHhcccccccccccC-CCcc---ccccHHHHHHHHHHHHhhcCCCceEEEee
Confidence 3489999996444 3344444445556776 8888888651 1111 23456677778888888888899999999
Q ss_pred ChhHHHHHHHHHhCC--CceeeEEEeccccchh
Q 020067 121 SWGSTLALAYSLAHP--DKVTGLVLRGIFLLRK 151 (331)
Q Consensus 121 S~Gg~~a~~~a~~~p--~~v~~li~~~~~~~~~ 151 (331)
||||..+..++...+ .+|+.++.++++-...
T Consensus 135 S~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~Gt 167 (336)
T COG1075 135 SMGGLDSRYYLGVLGGANRVASVVTLGTPHHGT 167 (336)
T ss_pred cccchhhHHHHhhcCccceEEEEEEeccCCCCc
Confidence 999999999999887 7999999999876543
No 164
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=98.45 E-value=1.2e-06 Score=75.72 Aligned_cols=105 Identities=13% Similarity=0.036 Sum_probs=65.4
Q ss_pred CCCcEEEeccCCCC---CCCCCcccccCC-C-CcEEEEecCC----CCCCCCCCCCCCccchHHHHHHHHHHHH---HhC
Q 020067 44 TGHPVVFLHGGPGG---GTTPSNRRFFDP-D-FYRIILFDQR----GAGKSTPHACLDQNTTWDLIDDIEKLRQ---HLE 111 (331)
Q Consensus 44 ~~~~vl~~HG~~~~---~~~~~~~~~~~~-~-g~~vi~~D~~----G~G~s~~~~~~~~~~~~~~~~~~~~~~~---~~~ 111 (331)
+.|+||++|||+.. .... ....+.. . ++.|+.+++| |+..+.........-+.|+...+..+.+ .+|
T Consensus 94 ~~pv~v~ihGG~~~~g~~~~~-~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~D~~~al~wv~~~i~~fg 172 (493)
T cd00312 94 SLPVMVWIHGGGFMFGSGSLY-PGDGLAREGDNVIVVSINYRLGVLGFLSTGDIELPGNYGLKDQRLALKWVQDNIAAFG 172 (493)
T ss_pred CCCEEEEEcCCccccCCCCCC-ChHHHHhcCCCEEEEEecccccccccccCCCCCCCcchhHHHHHHHHHHHHHHHHHhC
Confidence 45789999996532 2222 2223333 3 3999999999 3333322111123345566555555544 444
Q ss_pred --CCcEEEEEeChhHHHHHHHHHhC--CCceeeEEEeccccc
Q 020067 112 --IPEWQVFGGSWGSTLALAYSLAH--PDKVTGLVLRGIFLL 149 (331)
Q Consensus 112 --~~~v~lvG~S~Gg~~a~~~a~~~--p~~v~~li~~~~~~~ 149 (331)
.++|.|+|+|.||..+..++... +..++++|+.++...
T Consensus 173 gd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 173 GDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred CCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 45899999999999998887762 446888998886543
No 165
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=98.44 E-value=2.9e-06 Score=70.93 Aligned_cols=130 Identities=19% Similarity=0.103 Sum_probs=88.8
Q ss_pred CCCCccceeEeCCCceEEEEeCC----CCCCCcEEEeccCCCC---CCCCCcccccCCCCcEEEEecCCCCCCCCCCC--
Q 020067 19 VEPYSTGILKVSDIHTIYWEQSG----NPTGHPVVFLHGGPGG---GTTPSNRRFFDPDFYRIILFDQRGAGKSTPHA-- 89 (331)
Q Consensus 19 ~~~~~~~~~~~~~g~~l~~~~~g----~~~~~~vl~~HG~~~~---~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~-- 89 (331)
....+..+.++.||.+|.|...+ ..+.|++|+--||.+- ..+.......+++|...+..+.||-|+=.+.=
T Consensus 391 ~~~veQ~~atSkDGT~IPYFiv~K~~~~d~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~WH~ 470 (648)
T COG1505 391 NYEVEQFFATSKDGTRIPYFIVRKGAKKDENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFGPEWHQ 470 (648)
T ss_pred CceEEEEEEEcCCCccccEEEEecCCcCCCCceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccCCccCHHHHH
Confidence 34555667777899999887663 2246777777775543 44555557788999999999999977654210
Q ss_pred ----CCCccchHHHHHHHHHHHHHh--CCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEecccc
Q 020067 90 ----CLDQNTTWDLIDDIEKLRQHL--EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFL 148 (331)
Q Consensus 90 ----~~~~~~~~~~~~~~~~~~~~~--~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~ 148 (331)
...+..++|+++..+.++++= ..+++.+.|-|-||++.-.+..++|+.+.++|+--|..
T Consensus 471 Aa~k~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPll 535 (648)
T COG1505 471 AGMKENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPLL 535 (648)
T ss_pred HHhhhcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccchh
Confidence 112234455555555544431 23578999999999999999999999888777665544
No 166
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.43 E-value=7.4e-06 Score=60.99 Aligned_cols=103 Identities=23% Similarity=0.312 Sum_probs=63.2
Q ss_pred cEEEeccCCCCCCC-CCcccccCCCC-----cEEEEecCCCC----CCCCCCC---------CCCccchHHHHHHHHHHH
Q 020067 47 PVVFLHGGPGGGTT-PSNRRFFDPDF-----YRIILFDQRGA----GKSTPHA---------CLDQNTTWDLIDDIEKLR 107 (331)
Q Consensus 47 ~vl~~HG~~~~~~~-~~~~~~~~~~g-----~~vi~~D~~G~----G~s~~~~---------~~~~~~~~~~~~~~~~~~ 107 (331)
|.||+||.+++... ...+..+...+ --++.+|--|- |.=+... .....+..++...+..++
T Consensus 47 PTIfIhGsgG~asS~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~~m 126 (288)
T COG4814 47 PTIFIHGSGGTASSLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKKAM 126 (288)
T ss_pred ceEEEecCCCChhHHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHHHH
Confidence 68999997776443 34444443322 23555565551 1111110 001234455566665555
Q ss_pred H----HhCCCcEEEEEeChhHHHHHHHHHhCCC-----ceeeEEEeccccc
Q 020067 108 Q----HLEIPEWQVFGGSWGSTLALAYSLAHPD-----KVTGLVLRGIFLL 149 (331)
Q Consensus 108 ~----~~~~~~v~lvG~S~Gg~~a~~~a~~~p~-----~v~~li~~~~~~~ 149 (331)
. +.+++++.+|||||||.-...++..+.+ .+.++|.++++..
T Consensus 127 syL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 127 SYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 4 4577899999999999999999987632 4889999987653
No 167
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=98.42 E-value=8.6e-07 Score=58.24 Aligned_cols=60 Identities=17% Similarity=0.170 Sum_probs=53.0
Q ss_pred cccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHh
Q 020067 266 HINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNL 326 (331)
Q Consensus 266 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 326 (331)
..|+|++.++.|+++|.+.++.+++.+++++++++++.||...... -.-+.+.+.+||..
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~~s~lvt~~g~gHg~~~~~-s~C~~~~v~~yl~~ 93 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLPGSRLVTVDGAGHGVYAGG-SPCVDKAVDDYLLD 93 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCCCceEEEEeccCcceecCC-ChHHHHHHHHHHHc
Confidence 4899999999999999999999999999999999999999987532 55677888888864
No 168
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=98.39 E-value=8.9e-07 Score=67.78 Aligned_cols=101 Identities=16% Similarity=0.222 Sum_probs=64.0
Q ss_pred CcEEEeccCCCCCC-CCCcccccCCCCcEEEEecCCCCCCCCC---------CCCC------------Cc-c--chHH--
Q 020067 46 HPVVFLHGGPGGGT-TPSNRRFFDPDFYRIILFDQRGAGKSTP---------HACL------------DQ-N--TTWD-- 98 (331)
Q Consensus 46 ~~vl~~HG~~~~~~-~~~~~~~~~~~g~~vi~~D~~G~G~s~~---------~~~~------------~~-~--~~~~-- 98 (331)
|.|||-||.+++.. +......+++.||-|.++++|-+-.+-. +... +. . .-+.
T Consensus 119 PvvvFSHGLggsRt~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~irNeqv~ 198 (399)
T KOG3847|consen 119 PVVVFSHGLGGSRTLYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHIRNEQVG 198 (399)
T ss_pred cEEEEecccccchhhHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEeeCHHHH
Confidence 67999999777654 5667888889999999999987643320 0000 00 0 0011
Q ss_pred -HHHHHH---HHHHHh------------------------CCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccc
Q 020067 99 -LIDDIE---KLRQHL------------------------EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIF 147 (331)
Q Consensus 99 -~~~~~~---~~~~~~------------------------~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~ 147 (331)
-+..+. .+++.+ ...++.++|||+||..++...+.+. +++..|+++..
T Consensus 199 ~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t-~FrcaI~lD~W 274 (399)
T KOG3847|consen 199 QRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHT-DFRCAIALDAW 274 (399)
T ss_pred HHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhcccc-ceeeeeeeeee
Confidence 111111 122221 2236889999999999998877654 68888888864
No 169
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.31 E-value=3.5e-05 Score=57.80 Aligned_cols=58 Identities=16% Similarity=0.248 Sum_probs=48.5
Q ss_pred EEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCC-CcCCchhHHHHHHHHHHHhhh
Q 020067 269 ATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSA-NEPGIAAELVATNEKLKNLIK 328 (331)
Q Consensus 269 ~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~-~~~~~~~~~~~~i~~fl~~~~ 328 (331)
+.++.+++|..+|......+.+..|++++..++ +||.- +.-+ -+.+-+.|.+-|+++.
T Consensus 309 ~ivv~A~~D~Yipr~gv~~lQ~~WPg~eVr~~e-gGHVsayl~k-~dlfRR~I~d~L~R~~ 367 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPRTGVRSLQEIWPGCEVRYLE-GGHVSAYLFK-QDLFRRAIVDGLDRLD 367 (371)
T ss_pred EEEEEecCCccccccCcHHHHHhCCCCEEEEee-cCceeeeehh-chHHHHHHHHHHHhhh
Confidence 578889999999998899999999999999998 89965 3443 6778888888888764
No 170
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=98.26 E-value=3.3e-05 Score=65.32 Aligned_cols=129 Identities=17% Similarity=0.139 Sum_probs=90.2
Q ss_pred CCccceeEeCCCceE----EEEeCC--CCCCCcEEEeccCCC-C--CCCCCcccccCCCCcEEEEecCCCCCCCCCC---
Q 020067 21 PYSTGILKVSDIHTI----YWEQSG--NPTGHPVVFLHGGPG-G--GTTPSNRRFFDPDFYRIILFDQRGAGKSTPH--- 88 (331)
Q Consensus 21 ~~~~~~~~~~~g~~l----~~~~~g--~~~~~~vl~~HG~~~-~--~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~--- 88 (331)
..+...+...||..+ .|...- ..+.|.+|..+|+-+ + ..|..-...++..|+-....|.||-|.-...
T Consensus 440 ~~~r~~~~SkDGt~VPM~Iv~kk~~k~dg~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~~WHk 519 (712)
T KOG2237|consen 440 VVERIEVSSKDGTKVPMFIVYKKDIKLDGSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGEQWHK 519 (712)
T ss_pred EEEEEEEecCCCCccceEEEEechhhhcCCCceEEEEecccceeeccccccceeEEEecceEEEEEeeccCcccccchhh
Confidence 455667788898643 343222 125677888888433 2 4444555556678998888899997654311
Q ss_pred ---CCCCccchHHHHHHHHHHHHHh--CCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccc
Q 020067 89 ---ACLDQNTTWDLIDDIEKLRQHL--EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLL 149 (331)
Q Consensus 89 ---~~~~~~~~~~~~~~~~~~~~~~--~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~ 149 (331)
......+++|+...++.+++.- ..++..+.|.|.||.++-.++..+|+.+.++|+--|...
T Consensus 520 ~G~lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~VpfmD 585 (712)
T KOG2237|consen 520 DGRLAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFMD 585 (712)
T ss_pred ccchhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCchHhhhhhhcCccee
Confidence 1113467888888888777652 346899999999999999999999999999988777654
No 171
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=98.25 E-value=7.1e-07 Score=71.80 Aligned_cols=73 Identities=19% Similarity=0.167 Sum_probs=56.7
Q ss_pred chhhhhccccccccEEEEecCCCCccCCcchHHHHHhCCC--CcEEEecCCCCCCCcCCch--hHHHHHHHHHHHhh
Q 020067 255 SFLLDNIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPE--ADFKVVADAGHSANEPGIA--AELVATNEKLKNLI 327 (331)
Q Consensus 255 ~~~~~~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~~~~~--~~~~~~i~~fl~~~ 327 (331)
.+....+.++..+|+|+++|.+|..+|...+..+.+.... .+...+++++|.......+ ++..+.+.+|+.+.
T Consensus 221 ~d~~~~~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~ 297 (299)
T COG1073 221 LDPFDDAEKISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERH 297 (299)
T ss_pred CcchhhHhhcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCccHHHHHHHHHHHHHHHHh
Confidence 3445566666337999999999999999999988888755 5778889999998754323 37888899998765
No 172
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.23 E-value=3.8e-06 Score=66.13 Aligned_cols=106 Identities=13% Similarity=0.032 Sum_probs=65.3
Q ss_pred CCCcEEEeccCCCCCC--CCCcc--cccCCCCcEEEEecCCCCCCCCCCCC---CCccchHHHHHHHHHHHHHhCCCcEE
Q 020067 44 TGHPVVFLHGGPGGGT--TPSNR--RFFDPDFYRIILFDQRGAGKSTPHAC---LDQNTTWDLIDDIEKLRQHLEIPEWQ 116 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~--~~~~~--~~~~~~g~~vi~~D~~G~G~s~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~v~ 116 (331)
.+..+||+||+..+-. .+..+ ..-.......|.+.||..|.--.... ...++-.++..-+..+.+....++|+
T Consensus 115 ~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~~I~ 194 (377)
T COG4782 115 AKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPVKRIY 194 (377)
T ss_pred CCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCCceEE
Confidence 4567999999765522 22222 22233456688899997775432211 01233333444444444444677899
Q ss_pred EEEeChhHHHHHHHHHhC--------CCceeeEEEeccccc
Q 020067 117 VFGGSWGSTLALAYSLAH--------PDKVTGLVLRGIFLL 149 (331)
Q Consensus 117 lvG~S~Gg~~a~~~a~~~--------p~~v~~li~~~~~~~ 149 (331)
|++||||.++++....+. +.+++-+|+.+|-..
T Consensus 195 ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD 235 (377)
T COG4782 195 LLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDID 235 (377)
T ss_pred EEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCC
Confidence 999999999999887652 346788888777443
No 173
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.21 E-value=9.1e-07 Score=67.10 Aligned_cols=36 Identities=19% Similarity=0.096 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHhCC--CcEEEEEeChhHHHHHHHHH
Q 020067 97 WDLIDDIEKLRQHLEI--PEWQVFGGSWGSTLALAYSL 132 (331)
Q Consensus 97 ~~~~~~~~~~~~~~~~--~~v~lvG~S~Gg~~a~~~a~ 132 (331)
+.+++.+.+.++.... .++.+|||||||.++-.+..
T Consensus 60 ~rL~~eI~~~~~~~~~~~~~IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 60 ERLAEEILEHIKDYESKIRKISFIGHSLGGLIARYALG 97 (217)
T ss_pred HHHHHHHHHhccccccccccceEEEecccHHHHHHHHH
Confidence 3455555555554444 48999999999999876655
No 174
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=98.21 E-value=0.00025 Score=57.38 Aligned_cols=59 Identities=15% Similarity=0.242 Sum_probs=46.9
Q ss_pred cccEEEEecCCCCccCCcchHHHHHhCC------------------------C-CcEEEecCCCCCCCcCCchhHHHHHH
Q 020067 266 HINATIVQGRYDVCCPMMSAWDLHKAWP------------------------E-ADFKVVADAGHSANEPGIAAELVATN 320 (331)
Q Consensus 266 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~------------------------~-~~~~~~~~~gH~~~~~~~~~~~~~~i 320 (331)
+++|||..|+.|.+|+.-..+.+.+.+. + .++..+-++||+++ .+ |+...+.+
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~q-P~~al~m~ 310 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YR-PNETFIMF 310 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cC-HHHHHHHH
Confidence 4899999999999999876666666542 1 45666779999995 45 99999999
Q ss_pred HHHHHh
Q 020067 321 EKLKNL 326 (331)
Q Consensus 321 ~~fl~~ 326 (331)
..|+..
T Consensus 311 ~~fi~~ 316 (319)
T PLN02213 311 QRWISG 316 (319)
T ss_pred HHHHcC
Confidence 999864
No 175
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=98.18 E-value=0.0005 Score=58.84 Aligned_cols=127 Identities=17% Similarity=0.103 Sum_probs=87.7
Q ss_pred cceeEeCCCce----EEEEeC--CCCCCCcEEEeccC-CCC--CCCCCcccccCCCCcEEEEecCCCCCCCCCC------
Q 020067 24 TGILKVSDIHT----IYWEQS--GNPTGHPVVFLHGG-PGG--GTTPSNRRFFDPDFYRIILFDQRGAGKSTPH------ 88 (331)
Q Consensus 24 ~~~~~~~~g~~----l~~~~~--g~~~~~~vl~~HG~-~~~--~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~------ 88 (331)
.-.++.+||.+ |.|+.- -+.+.|.+|..-|. +.+ ..+......++.+|+---..--||-|.-...
T Consensus 421 riwa~a~dgv~VPVSLvyrkd~~~~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~WYe~GK 500 (682)
T COG1770 421 RIWATADDGVQVPVSLVYRKDTKLDGSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRAWYEDGK 500 (682)
T ss_pred EEEEEcCCCcEeeEEEEEecccCCCCCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccChHHHHhhh
Confidence 34455578864 445532 23356777777773 222 3344555667789987666677886655421
Q ss_pred CCCCccchHHHHHHHHHHHHHh--CCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccch
Q 020067 89 ACLDQNTTWDLIDDIEKLRQHL--EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLR 150 (331)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~--~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~ 150 (331)
......++.|+.+....+++.= ..+.++++|-|.||++.-..+...|+.++++|+--|+...
T Consensus 501 ~l~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVDv 564 (682)
T COG1770 501 LLNKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVDV 564 (682)
T ss_pred hhhccccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCccch
Confidence 1113468888888888887653 2347999999999999999999999999999998887653
No 176
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.18 E-value=4.9e-07 Score=70.79 Aligned_cols=52 Identities=21% Similarity=0.171 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHH-hCCC--cEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccc
Q 020067 98 DLIDDIEKLRQH-LEIP--EWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLL 149 (331)
Q Consensus 98 ~~~~~~~~~~~~-~~~~--~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~ 149 (331)
.+.+++...++. +... +..|+|+||||..|+.++.++|+.+.+++.+++...
T Consensus 97 ~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~ 151 (251)
T PF00756_consen 97 FLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALD 151 (251)
T ss_dssp HHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESE
T ss_pred ehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCcccc
Confidence 345566665554 3322 279999999999999999999999999999998644
No 177
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=98.07 E-value=6.4e-06 Score=72.23 Aligned_cols=121 Identities=13% Similarity=0.067 Sum_probs=69.1
Q ss_pred eCCCceEEEEeC-CCCC---CCcEEEeccCCCC---C--CCCCcccccCCCCcEEEEecCC----CCCCCCCCCCC-Ccc
Q 020067 29 VSDIHTIYWEQS-GNPT---GHPVVFLHGGPGG---G--TTPSNRRFFDPDFYRIILFDQR----GAGKSTPHACL-DQN 94 (331)
Q Consensus 29 ~~~g~~l~~~~~-g~~~---~~~vl~~HG~~~~---~--~~~~~~~~~~~~g~~vi~~D~~----G~G~s~~~~~~-~~~ 94 (331)
..|-..|..+.. +..+ -|++|+||||+-. . ..+.....+..++.-||.+++| |+-.+...... ..+
T Consensus 105 sEDCL~LnI~~P~~~~~~~~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~ 184 (535)
T PF00135_consen 105 SEDCLYLNIYTPSNASSNSKLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGNY 184 (535)
T ss_dssp ES---EEEEEEETSSSSTTSEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTSHBSTH
T ss_pred CchHHHHhhhhccccccccccceEEEeecccccCCCcccccccccccccCCCEEEEEecccccccccccccccccCchhh
Confidence 445555554433 2222 3789999996532 2 1222233344689999999999 33333222111 356
Q ss_pred chHHHHHHHHHHHHHh---C--CCcEEEEEeChhHHHHHHHHHhC--CCceeeEEEeccccc
Q 020067 95 TTWDLIDDIEKLRQHL---E--IPEWQVFGGSWGSTLALAYSLAH--PDKVTGLVLRGIFLL 149 (331)
Q Consensus 95 ~~~~~~~~~~~~~~~~---~--~~~v~lvG~S~Gg~~a~~~a~~~--p~~v~~li~~~~~~~ 149 (331)
-+.|+...++.+-+.+ | .++|.|+|||.||..+..++..- ...++++|+.++...
T Consensus 185 Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~~ 246 (535)
T PF00135_consen 185 GLLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSAL 246 (535)
T ss_dssp HHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--TT
T ss_pred hhhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeeccccccccccccccccccc
Confidence 6778877777776655 4 34899999999998887776652 357999999998543
No 178
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=98.05 E-value=2e-05 Score=62.92 Aligned_cols=82 Identities=16% Similarity=0.104 Sum_probs=57.4
Q ss_pred EEEeccCCC-CCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHh----CCCcEEEEEeCh
Q 020067 48 VVFLHGGPG-GGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHL----EIPEWQVFGGSW 122 (331)
Q Consensus 48 vl~~HG~~~-~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~v~lvG~S~ 122 (331)
-||+.|-++ ..........+.++|+.||.+|-.=|=.|.+ +.++.++|+..+++.+ +..++.|+|+|+
T Consensus 263 av~~SGDGGWr~lDk~v~~~l~~~gvpVvGvdsLRYfW~~r-------tPe~~a~Dl~r~i~~y~~~w~~~~~~liGySf 335 (456)
T COG3946 263 AVFYSGDGGWRDLDKEVAEALQKQGVPVVGVDSLRYFWSER-------TPEQIAADLSRLIRFYARRWGAKRVLLIGYSF 335 (456)
T ss_pred EEEEecCCchhhhhHHHHHHHHHCCCceeeeehhhhhhccC-------CHHHHHHHHHHHHHHHHHhhCcceEEEEeecc
Confidence 466666322 2333556777888999999999655544543 4567777777777654 667999999999
Q ss_pred hHHHHHHHHHhCCC
Q 020067 123 GSTLALAYSLAHPD 136 (331)
Q Consensus 123 Gg~~a~~~a~~~p~ 136 (331)
|+-+.-....+.|.
T Consensus 336 GADvlP~~~n~L~~ 349 (456)
T COG3946 336 GADVLPFAYNRLPP 349 (456)
T ss_pred cchhhHHHHHhCCH
Confidence 99887766666553
No 179
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.94 E-value=1.4e-05 Score=69.01 Aligned_cols=122 Identities=16% Similarity=0.174 Sum_probs=68.0
Q ss_pred CccceeEeCCCceEEEEeCC---------CCCCCcEEEeccCCCCCC-CCC----------------cccccCCCCcEEE
Q 020067 22 YSTGILKVSDIHTIYWEQSG---------NPTGHPVVFLHGGPGGGT-TPS----------------NRRFFDPDFYRII 75 (331)
Q Consensus 22 ~~~~~~~~~~g~~l~~~~~g---------~~~~~~vl~~HG~~~~~~-~~~----------------~~~~~~~~g~~vi 75 (331)
..++..+..+.+.++....| +.++-||+|++|..|+.. ... .........|+.+
T Consensus 57 i~~r~t~~a~kY~LYLY~Egs~~~e~~~lelsGIPVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFF 136 (973)
T KOG3724|consen 57 IPERLTPQADKYSLYLYREGSRWWERSTLELSGIPVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFF 136 (973)
T ss_pred CcccccCCCCceEEEEecccccccccccccCCCceEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceE
Confidence 33444455565566544333 235668999999766532 111 1112223567788
Q ss_pred EecCCCCCCCCCCCCCCccchHHHHHHHHHHHH----HhCC---------CcEEEEEeChhHHHHHHHHHhC---CCcee
Q 020067 76 LFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQ----HLEI---------PEWQVFGGSWGSTLALAYSLAH---PDKVT 139 (331)
Q Consensus 76 ~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~----~~~~---------~~v~lvG~S~Gg~~a~~~a~~~---p~~v~ 139 (331)
+.|+-+ .-....+.+..+.++-+.+.++ .... ..|+++||||||.+|..++..- ++.|.
T Consensus 137 aVDFnE-----e~tAm~G~~l~dQtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVn 211 (973)
T KOG3724|consen 137 AVDFNE-----EFTAMHGHILLDQTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVN 211 (973)
T ss_pred EEcccc-----hhhhhccHhHHHHHHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhh
Confidence 888754 1111123345555544444333 2221 2499999999999998776532 45566
Q ss_pred eEEEecccc
Q 020067 140 GLVLRGIFL 148 (331)
Q Consensus 140 ~li~~~~~~ 148 (331)
-++..+++.
T Consensus 212 tIITlssPH 220 (973)
T KOG3724|consen 212 TIITLSSPH 220 (973)
T ss_pred hhhhhcCcc
Confidence 666666543
No 180
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=97.91 E-value=0.00017 Score=59.63 Aligned_cols=120 Identities=14% Similarity=0.067 Sum_probs=71.7
Q ss_pred CCCceEEEEeCC--CCCCCcEEEeccCC---CCCC-CCCcccccCCCC-cEEEEecCCC--CCCCC----C--CCCCCcc
Q 020067 30 SDIHTIYWEQSG--NPTGHPVVFLHGGP---GGGT-TPSNRRFFDPDF-YRIILFDQRG--AGKST----P--HACLDQN 94 (331)
Q Consensus 30 ~~g~~l~~~~~g--~~~~~~vl~~HG~~---~~~~-~~~~~~~~~~~g-~~vi~~D~~G--~G~s~----~--~~~~~~~ 94 (331)
.|...|..+.-. ..+.|++|+||||+ ++.. ...--..|+++| +-|+.+++|= .|.-. . .......
T Consensus 77 EDCL~LNIwaP~~~a~~~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~ 156 (491)
T COG2272 77 EDCLYLNIWAPEVPAEKLPVMVYIHGGGYIMGSGSEPLYDGSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNL 156 (491)
T ss_pred ccceeEEeeccCCCCCCCcEEEEEeccccccCCCcccccChHHHHhcCCEEEEEeCcccccceeeehhhccccccccccc
Confidence 344445444332 22348899999954 2222 233444455666 9999999982 22111 1 1111123
Q ss_pred chHHHHHHHHHH---HHHhCC--CcEEEEEeChhHHHHHHHHHh--CCCceeeEEEeccccc
Q 020067 95 TTWDLIDDIEKL---RQHLEI--PEWQVFGGSWGSTLALAYSLA--HPDKVTGLVLRGIFLL 149 (331)
Q Consensus 95 ~~~~~~~~~~~~---~~~~~~--~~v~lvG~S~Gg~~a~~~a~~--~p~~v~~li~~~~~~~ 149 (331)
-+.|++..++.+ ++++|. ++|.|+|+|.|++.++.+.+. ....+.++|+.++...
T Consensus 157 Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 157 GLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGAAS 218 (491)
T ss_pred cHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCCCC
Confidence 556666666555 455554 479999999999988877654 1236788888887664
No 181
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=97.91 E-value=8.9e-05 Score=62.99 Aligned_cols=81 Identities=25% Similarity=0.322 Sum_probs=59.0
Q ss_pred CCcEEEEecCCCCCCCCCCCC-----CCccchHHHHHHHHHHHHHhC-------CCcEEEEEeChhHHHHHHHHHhCCCc
Q 020067 70 DFYRIILFDQRGAGKSTPHAC-----LDQNTTWDLIDDIEKLRQHLE-------IPEWQVFGGSWGSTLALAYSLAHPDK 137 (331)
Q Consensus 70 ~g~~vi~~D~~G~G~s~~~~~-----~~~~~~~~~~~~~~~~~~~~~-------~~~v~lvG~S~Gg~~a~~~a~~~p~~ 137 (331)
-|-.+|++++|-+|.|.+... ....+.++..+|+..+++.+. ..|++++|-|+||.+|..+-.++|+.
T Consensus 58 ~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~ 137 (434)
T PF05577_consen 58 FGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPHL 137 (434)
T ss_dssp HTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TTT
T ss_pred cCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCCe
Confidence 577899999999999986432 233677888899988887653 23899999999999999999999999
Q ss_pred eeeEEEeccccch
Q 020067 138 VTGLVLRGIFLLR 150 (331)
Q Consensus 138 v~~li~~~~~~~~ 150 (331)
|.|.+.-+++...
T Consensus 138 ~~ga~ASSapv~a 150 (434)
T PF05577_consen 138 FDGAWASSAPVQA 150 (434)
T ss_dssp -SEEEEET--CCH
T ss_pred eEEEEeccceeee
Confidence 9999998887754
No 182
>KOG3101 consensus Esterase D [General function prediction only]
Probab=97.91 E-value=9.2e-05 Score=53.71 Aligned_cols=105 Identities=14% Similarity=0.105 Sum_probs=64.6
Q ss_pred CCcEEEeccCCCCCCC----CCcccccCCCCcEEEEecCCCCCCCCCCCC--C------------------Cccch-HHH
Q 020067 45 GHPVVFLHGGPGGGTT----PSNRRFFDPDFYRIILFDQRGAGKSTPHAC--L------------------DQNTT-WDL 99 (331)
Q Consensus 45 ~~~vl~~HG~~~~~~~----~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~--~------------------~~~~~-~~~ 99 (331)
-|++.++.|....... ..+.....+.|+.|++||-.-.|..-.... . ..+.+ +-+
T Consensus 44 ~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvnAt~epw~~~yrMYdYv 123 (283)
T KOG3101|consen 44 CPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVNATQEPWAKHYRMYDYV 123 (283)
T ss_pred CceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeEEecccchHhhhhhHHHHH
Confidence 3678888887654322 123333445899999999654332211100 0 00112 223
Q ss_pred HHHHHHHHHH----hCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccc
Q 020067 100 IDDIEKLRQH----LEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLL 149 (331)
Q Consensus 100 ~~~~~~~~~~----~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~ 149 (331)
.+.+-++++. ++..++.|.||||||.=|+..+.+.|++.+.+-..+|...
T Consensus 124 ~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~N 177 (283)
T KOG3101|consen 124 VKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICN 177 (283)
T ss_pred HHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccC
Confidence 3444444442 2345799999999999999999999999988888777543
No 183
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=97.91 E-value=0.00015 Score=56.11 Aligned_cols=115 Identities=12% Similarity=0.100 Sum_probs=66.2
Q ss_pred CCceEEEEeCCCC---CCCcEEEecc--CCCCCCCCCcccccCC----CCcEEEEecCCCCCCCCCCCCCCccchHH---
Q 020067 31 DIHTIYWEQSGNP---TGHPVVFLHG--GPGGGTTPSNRRFFDP----DFYRIILFDQRGAGKSTPHACLDQNTTWD--- 98 (331)
Q Consensus 31 ~g~~l~~~~~g~~---~~~~vl~~HG--~~~~~~~~~~~~~~~~----~g~~vi~~D~~G~G~s~~~~~~~~~~~~~--- 98 (331)
+-..+.|...|-. +-|++++.|| +..+.........+.. ..-.+|.+|.----. +.. ..+..++
T Consensus 81 ~~~~vv~lppgy~~~~k~pvl~~~DG~~~~~~g~i~~~~dsli~~g~i~pai~vgid~~d~~~--R~~--~~~~n~~~~~ 156 (299)
T COG2382 81 ERRRVVYLPPGYNPLEKYPVLYLQDGQDWFRSGRIPRILDSLIAAGEIPPAILVGIDYIDVKK--RRE--ELHCNEAYWR 156 (299)
T ss_pred ceeEEEEeCCCCCccccccEEEEeccHHHHhcCChHHHHHHHHHcCCCCCceEEecCCCCHHH--HHH--HhcccHHHHH
Confidence 3334555555521 2367899999 4445555554444444 334566666532000 000 0112223
Q ss_pred -HHHHHHHHHHHh-----CCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccc
Q 020067 99 -LIDDIEKLRQHL-----EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLL 149 (331)
Q Consensus 99 -~~~~~~~~~~~~-----~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~ 149 (331)
+++.+.=.++.. ....-+|.|.|+||.+++..+.++|+.+..++..++...
T Consensus 157 ~L~~eLlP~v~~~yp~~~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~ 213 (299)
T COG2382 157 FLAQELLPYVEERYPTSADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFW 213 (299)
T ss_pred HHHHHhhhhhhccCcccccCCCcEEeccccccHHHHHHHhcCchhhceeeccCCccc
Confidence 333333333321 123578999999999999999999999999998887553
No 184
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.86 E-value=0.00011 Score=53.30 Aligned_cols=103 Identities=16% Similarity=0.124 Sum_probs=61.6
Q ss_pred CCcEEEeccCCCC--CCCC---------------CcccccCCCCcEEEEecCCC---CCCCCCCCCCCccchHHHHH-HH
Q 020067 45 GHPVVFLHGGPGG--GTTP---------------SNRRFFDPDFYRIILFDQRG---AGKSTPHACLDQNTTWDLID-DI 103 (331)
Q Consensus 45 ~~~vl~~HG~~~~--~~~~---------------~~~~~~~~~g~~vi~~D~~G---~G~s~~~~~~~~~~~~~~~~-~~ 103 (331)
...+|+|||.+-. +.|. ..+....+.||.|++.+.-- +-.+...+.....+..+.+. .+
T Consensus 101 ~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~yvw 180 (297)
T KOG3967|consen 101 QKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAKYVW 180 (297)
T ss_pred cceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchhccchHHHHHHHH
Confidence 4479999995421 2221 12222335899999987531 11221111101112222222 33
Q ss_pred HHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCC--ceeeEEEeccc
Q 020067 104 EKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPD--KVTGLVLRGIF 147 (331)
Q Consensus 104 ~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~--~v~~li~~~~~ 147 (331)
..++.-...+.+.++.||.||...+.+..++|+ +|.++.+.+++
T Consensus 181 ~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~ 226 (297)
T KOG3967|consen 181 KNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSA 226 (297)
T ss_pred HHHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeeccc
Confidence 445555566789999999999999999999975 67777777765
No 185
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=97.84 E-value=2.6e-05 Score=60.12 Aligned_cols=105 Identities=16% Similarity=0.096 Sum_probs=51.1
Q ss_pred CCCCcEEEeccCCCCCC---CCCcccccC---CCCcEEEEecCCCCCCC-CCCCCCCccchHHHHHHHHHHHHHhC-C-C
Q 020067 43 PTGHPVVFLHGGPGGGT---TPSNRRFFD---PDFYRIILFDQRGAGKS-TPHACLDQNTTWDLIDDIEKLRQHLE-I-P 113 (331)
Q Consensus 43 ~~~~~vl~~HG~~~~~~---~~~~~~~~~---~~g~~vi~~D~~G~G~s-~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~ 113 (331)
++..|||+.||.+++.. ....+..+. -.|.-|..++.- -+.+ +.... .-....+.++.+.+.+.... . +
T Consensus 3 ~~~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~ig-~~~~~D~~~s-~f~~v~~Qv~~vc~~l~~~p~L~~ 80 (279)
T PF02089_consen 3 PSPLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEIG-NDPSEDVENS-FFGNVNDQVEQVCEQLANDPELAN 80 (279)
T ss_dssp TSS--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--SS-SSHHHHHHHH-HHSHHHHHHHHHHHHHHH-GGGTT
T ss_pred CCCCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEEC-CCcchhhhhh-HHHHHHHHHHHHHHHHhhChhhhc
Confidence 34558999999765432 122222221 257778887763 2211 10000 01233444444544444321 1 3
Q ss_pred cEEEEEeChhHHHHHHHHHhCCC-ceeeEEEeccccc
Q 020067 114 EWQVFGGSWGSTLALAYSLAHPD-KVTGLVLRGIFLL 149 (331)
Q Consensus 114 ~v~lvG~S~Gg~~a~~~a~~~p~-~v~~li~~~~~~~ 149 (331)
-++++|+|.||.++-.++.+.|+ .|+.+|.++++-.
T Consensus 81 G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph~ 117 (279)
T PF02089_consen 81 GFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPHM 117 (279)
T ss_dssp -EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--TT
T ss_pred ceeeeeeccccHHHHHHHHHCCCCCceeEEEecCccc
Confidence 59999999999999999999865 6999999987654
No 186
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=97.84 E-value=3.6e-05 Score=63.89 Aligned_cols=114 Identities=11% Similarity=0.001 Sum_probs=66.1
Q ss_pred eeEeCCCceEEEEeCCCCCCCcEEEec-c-CCCCCCCCCcccccCCCCcE------EEEecCCCCCCCCCCCCCCccchH
Q 020067 26 ILKVSDIHTIYWEQSGNPTGHPVVFLH-G-GPGGGTTPSNRRFFDPDFYR------IILFDQRGAGKSTPHACLDQNTTW 97 (331)
Q Consensus 26 ~~~~~~g~~l~~~~~g~~~~~~vl~~H-G-~~~~~~~~~~~~~~~~~g~~------vi~~D~~G~G~s~~~~~~~~~~~~ 97 (331)
.....+|..+.....|. -..|-.+- . ..+...|..++..|.+.||. ..-+|+|---. ..+
T Consensus 33 ~~~~~~gv~i~~~~~g~--~~~i~~ld~~~~~~~~~~~~li~~L~~~GY~~~~~l~~~pYDWR~~~~----------~~~ 100 (389)
T PF02450_consen 33 HYSNDPGVEIRVPGFGG--TSGIEYLDPSFITGYWYFAKLIENLEKLGYDRGKDLFAAPYDWRLSPA----------ERD 100 (389)
T ss_pred ceecCCCceeecCCCCc--eeeeeecccccccccchHHHHHHHHHhcCcccCCEEEEEeechhhchh----------hHH
Confidence 44455666666655552 11222221 1 11112344566666665554 22368773111 233
Q ss_pred HHHHHHHHHHHHh---CCCcEEEEEeChhHHHHHHHHHhCCC------ceeeEEEeccccchh
Q 020067 98 DLIDDIEKLRQHL---EIPEWQVFGGSWGSTLALAYSLAHPD------KVTGLVLRGIFLLRK 151 (331)
Q Consensus 98 ~~~~~~~~~~~~~---~~~~v~lvG~S~Gg~~a~~~a~~~p~------~v~~li~~~~~~~~~ 151 (331)
++...+...++.. ..+||+|+||||||.++..+....+. .|+++|.++++....
T Consensus 101 ~~~~~lk~~ie~~~~~~~~kv~li~HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p~~Gs 163 (389)
T PF02450_consen 101 EYFTKLKQLIEEAYKKNGKKVVLIAHSMGGLVARYFLQWMPQEEWKDKYIKRFISIGTPFGGS 163 (389)
T ss_pred HHHHHHHHHHHHHHHhcCCcEEEEEeCCCchHHHHHHHhccchhhHHhhhhEEEEeCCCCCCC
Confidence 4444444444433 25799999999999999999888743 599999999877643
No 187
>COG0627 Predicted esterase [General function prediction only]
Probab=97.79 E-value=0.00013 Score=58.11 Aligned_cols=57 Identities=21% Similarity=0.183 Sum_probs=42.2
Q ss_pred cchHH-HHHHHHHHHHH-hCC----CcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccch
Q 020067 94 NTTWD-LIDDIEKLRQH-LEI----PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLR 150 (331)
Q Consensus 94 ~~~~~-~~~~~~~~~~~-~~~----~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~ 150 (331)
+.+++ +.+.+-..+++ ... ++..++||||||.-|+.+|+++|++++.+...++....
T Consensus 127 ~q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~ 189 (316)
T COG0627 127 YQWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSP 189 (316)
T ss_pred cchhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceeccccccccc
Confidence 44444 34455544443 331 26899999999999999999999999999999887654
No 188
>PLN02606 palmitoyl-protein thioesterase
Probab=97.68 E-value=0.00012 Score=57.01 Aligned_cols=100 Identities=17% Similarity=0.101 Sum_probs=58.7
Q ss_pred CCCcEEEeccCCCC---CCCCCcccccC-CCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHH---hCCCcEE
Q 020067 44 TGHPVVFLHGGPGG---GTTPSNRRFFD-PDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQH---LEIPEWQ 116 (331)
Q Consensus 44 ~~~~vl~~HG~~~~---~~~~~~~~~~~-~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~ 116 (331)
+..|||+.||.+++ .....+...+. ..++.+..+. .|-+.. .. .-....+.++.+.+-+.. +. +-++
T Consensus 25 ~~~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~~~~---~s-~~~~~~~Qv~~vce~l~~~~~L~-~G~n 98 (306)
T PLN02606 25 LSVPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGNGVQ---DS-LFMPLRQQASIACEKIKQMKELS-EGYN 98 (306)
T ss_pred CCCCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECCCcc---cc-cccCHHHHHHHHHHHHhcchhhc-CceE
Confidence 45689999996643 22223333332 1355444444 222211 10 112334444444333332 22 3499
Q ss_pred EEEeChhHHHHHHHHHhCCC--ceeeEEEeccccc
Q 020067 117 VFGGSWGSTLALAYSLAHPD--KVTGLVLRGIFLL 149 (331)
Q Consensus 117 lvG~S~Gg~~a~~~a~~~p~--~v~~li~~~~~~~ 149 (331)
++|+|.||.++-.++.+.|+ .|+.+|.++++-.
T Consensus 99 aIGfSQGglflRa~ierc~~~p~V~nlISlggph~ 133 (306)
T PLN02606 99 IVAESQGNLVARGLIEFCDNAPPVINYVSLGGPHA 133 (306)
T ss_pred EEEEcchhHHHHHHHHHCCCCCCcceEEEecCCcC
Confidence 99999999999999999977 5999999998654
No 189
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.67 E-value=0.00016 Score=51.71 Aligned_cols=52 Identities=19% Similarity=0.085 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHH----hCCCcEEEEEeChhHHHHHHHHHhCCC----ceeeEEEeccccc
Q 020067 98 DLIDDIEKLRQH----LEIPEWQVFGGSWGSTLALAYSLAHPD----KVTGLVLRGIFLL 149 (331)
Q Consensus 98 ~~~~~~~~~~~~----~~~~~v~lvG~S~Gg~~a~~~a~~~p~----~v~~li~~~~~~~ 149 (331)
.+...+...++. ....+++++|||+||.+|..++..... ....++..+++..
T Consensus 9 ~~~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~ 68 (153)
T cd00741 9 SLANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRV 68 (153)
T ss_pred HHHHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCcc
Confidence 344444444433 356789999999999999999887754 5677777777654
No 190
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.67 E-value=0.00019 Score=59.26 Aligned_cols=110 Identities=20% Similarity=0.348 Sum_probs=81.2
Q ss_pred CCCCCcEEEecc-CCCCCCCC-----CcccccCCCCcEEEEecCCCCCCCCCCCCC-----CccchHHHHHHHHHHHHHh
Q 020067 42 NPTGHPVVFLHG-GPGGGTTP-----SNRRFFDPDFYRIILFDQRGAGKSTPHACL-----DQNTTWDLIDDIEKLRQHL 110 (331)
Q Consensus 42 ~~~~~~vl~~HG-~~~~~~~~-----~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~-----~~~~~~~~~~~~~~~~~~~ 110 (331)
.+++|..|+|-| ++.+..|- .+.....+.|-.|+..++|-+|.|.+.... ...+..+..+|+..+++.+
T Consensus 83 ~~~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~ 162 (514)
T KOG2182|consen 83 KPGGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAM 162 (514)
T ss_pred cCCCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHH
Confidence 346777777777 55554442 122223347889999999999988654322 2246677888998888876
Q ss_pred CC-------CcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchh
Q 020067 111 EI-------PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRK 151 (331)
Q Consensus 111 ~~-------~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~ 151 (331)
.. .|.+.+|-|+-|.++..+=..+|+.+.|.|.-+++....
T Consensus 163 n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv~A~ 210 (514)
T KOG2182|consen 163 NAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPVLAK 210 (514)
T ss_pred HhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeecccccceeEE
Confidence 32 289999999999999999999999999999988877643
No 191
>PLN02633 palmitoyl protein thioesterase family protein
Probab=97.65 E-value=0.00064 Score=53.20 Aligned_cols=100 Identities=11% Similarity=0.012 Sum_probs=60.8
Q ss_pred CCCcEEEeccCCCCCCC---CCcccccC-CCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHH---hCCCcEE
Q 020067 44 TGHPVVFLHGGPGGGTT---PSNRRFFD-PDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQH---LEIPEWQ 116 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~~---~~~~~~~~-~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~ 116 (331)
...|+|+.||.+++... ..+...+. -.|..+..+.. |.+.... .-....+.++.+.+-+.. +. +-++
T Consensus 24 ~~~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i---g~~~~~s--~~~~~~~Qve~vce~l~~~~~l~-~G~n 97 (314)
T PLN02633 24 VSVPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI---GNGVGDS--WLMPLTQQAEIACEKVKQMKELS-QGYN 97 (314)
T ss_pred CCCCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE---CCCcccc--ceeCHHHHHHHHHHHHhhchhhh-CcEE
Confidence 45689999997665332 22222221 14566665543 3321111 123344455544443333 22 3499
Q ss_pred EEEeChhHHHHHHHHHhCCC--ceeeEEEeccccc
Q 020067 117 VFGGSWGSTLALAYSLAHPD--KVTGLVLRGIFLL 149 (331)
Q Consensus 117 lvG~S~Gg~~a~~~a~~~p~--~v~~li~~~~~~~ 149 (331)
++|+|.||.++-.++.+.|+ .|+.+|.++++-.
T Consensus 98 aIGfSQGGlflRa~ierc~~~p~V~nlISlggph~ 132 (314)
T PLN02633 98 IVGRSQGNLVARGLIEFCDGGPPVYNYISLAGPHA 132 (314)
T ss_pred EEEEccchHHHHHHHHHCCCCCCcceEEEecCCCC
Confidence 99999999999999999987 5999999987654
No 192
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=97.56 E-value=0.0009 Score=50.74 Aligned_cols=99 Identities=16% Similarity=0.204 Sum_probs=61.6
Q ss_pred CCCcEEEeccCCCCCCC---CCcccccC-CCCcEEEEecCCCCC--CCCCCCCCCccchHHHHHHHHHHHHHhC--CCcE
Q 020067 44 TGHPVVFLHGGPGGGTT---PSNRRFFD-PDFYRIILFDQRGAG--KSTPHACLDQNTTWDLIDDIEKLRQHLE--IPEW 115 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~~---~~~~~~~~-~~g~~vi~~D~~G~G--~s~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v 115 (331)
+..|+|++||.+++... ..+...+. -.|..|++.|. |-| .|. -....++++.+.+.+.... .+-+
T Consensus 22 s~~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei-g~g~~~s~------l~pl~~Qv~~~ce~v~~m~~lsqGy 94 (296)
T KOG2541|consen 22 SPVPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI-GDGIKDSS------LMPLWEQVDVACEKVKQMPELSQGY 94 (296)
T ss_pred ccCCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe-cCCcchhh------hccHHHHHHHHHHHHhcchhccCce
Confidence 33679999996655333 22222221 26788888885 444 221 1234455554444443222 1348
Q ss_pred EEEEeChhHHHHHHHHHhCCC-ceeeEEEeccccc
Q 020067 116 QVFGGSWGSTLALAYSLAHPD-KVTGLVLRGIFLL 149 (331)
Q Consensus 116 ~lvG~S~Gg~~a~~~a~~~p~-~v~~li~~~~~~~ 149 (331)
.++|.|.||.++-.++...++ .++.+|.++++-.
T Consensus 95 nivg~SQGglv~Raliq~cd~ppV~n~ISL~gPha 129 (296)
T KOG2541|consen 95 NIVGYSQGGLVARALIQFCDNPPVKNFISLGGPHA 129 (296)
T ss_pred EEEEEccccHHHHHHHHhCCCCCcceeEeccCCcC
Confidence 999999999999999887654 5888998887544
No 193
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=97.49 E-value=0.001 Score=54.12 Aligned_cols=36 Identities=22% Similarity=0.209 Sum_probs=32.2
Q ss_pred cEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccc
Q 020067 114 EWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLL 149 (331)
Q Consensus 114 ~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~ 149 (331)
|++++|+|.||.+|..+|.-.|..+++++=-++.+.
T Consensus 185 p~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~~ 220 (403)
T PF11144_consen 185 PKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYAL 220 (403)
T ss_pred cEEEEecCcHHHHHHHHHhhCccceeEEEecCcccc
Confidence 899999999999999999999999999887776554
No 194
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.47 E-value=0.00038 Score=49.00 Aligned_cols=38 Identities=18% Similarity=0.164 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhC
Q 020067 97 WDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAH 134 (331)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~ 134 (331)
+.+.+.+..+++.....++++.|||+||.+|..++...
T Consensus 48 ~~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l 85 (140)
T PF01764_consen 48 DQILDALKELVEKYPDYSIVITGHSLGGALASLAAADL 85 (140)
T ss_dssp HHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccCccchhhccchHHHHHHHHHHhh
Confidence 35566667767776767899999999999999988763
No 195
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=97.44 E-value=0.007 Score=46.68 Aligned_cols=101 Identities=16% Similarity=0.095 Sum_probs=67.1
Q ss_pred CcEEEeccCCCC-CC-CCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCcEEEEEeChh
Q 020067 46 HPVVFLHGGPGG-GT-TPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWG 123 (331)
Q Consensus 46 ~~vl~~HG~~~~-~~-~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG~S~G 123 (331)
|.|+++-...+. .. ....+..++. ...|+..|+-.--.-+... ...+++++.+.+.+++..+|.+ +++++.|.-
T Consensus 104 PkvLivapmsGH~aTLLR~TV~alLp-~~~vyitDW~dAr~Vp~~~--G~FdldDYIdyvie~~~~~Gp~-~hv~aVCQP 179 (415)
T COG4553 104 PKVLIVAPMSGHYATLLRGTVEALLP-YHDVYITDWVDARMVPLEA--GHFDLDDYIDYVIEMINFLGPD-AHVMAVCQP 179 (415)
T ss_pred CeEEEEecccccHHHHHHHHHHHhcc-ccceeEeeccccceeeccc--CCccHHHHHHHHHHHHHHhCCC-CcEEEEecC
Confidence 456666554443 22 2344455543 4578888886543333222 4678999999999999999955 788888876
Q ss_pred HH-----HHHHHHHhCCCceeeEEEeccccch
Q 020067 124 ST-----LALAYSLAHPDKVTGLVLRGIFLLR 150 (331)
Q Consensus 124 g~-----~a~~~a~~~p~~v~~li~~~~~~~~ 150 (331)
+. +++..+...|......++++++...
T Consensus 180 ~vPvLAAisLM~~~~~p~~PssMtlmGgPIDa 211 (415)
T COG4553 180 TVPVLAAISLMEEDGDPNVPSSMTLMGGPIDA 211 (415)
T ss_pred CchHHHHHHHHHhcCCCCCCceeeeecCcccc
Confidence 54 3444444567788999999987764
No 196
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.40 E-value=0.00041 Score=55.87 Aligned_cols=101 Identities=24% Similarity=0.270 Sum_probs=72.1
Q ss_pred CcEEEeccCCCCCCC--------CCcccccCCCCcEEEEecCCCCCCCCCCCCC--------CccchHHHHHHHHHHHHH
Q 020067 46 HPVVFLHGGPGGGTT--------PSNRRFFDPDFYRIILFDQRGAGKSTPHACL--------DQNTTWDLIDDIEKLRQH 109 (331)
Q Consensus 46 ~~vl~~HG~~~~~~~--------~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~--------~~~~~~~~~~~~~~~~~~ 109 (331)
-||+|.-|..++-.+ |..++. .+--+|-.++|-+|+|.+-... ...+.++-.+|...++..
T Consensus 81 gPIffYtGNEGdie~Fa~ntGFm~D~Ap~---~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~ 157 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIEWFANNTGFMWDLAPE---LKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTF 157 (492)
T ss_pred CceEEEeCCcccHHHHHhccchHHhhhHh---hCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHH
Confidence 568888886654322 344443 4567899999999999754321 123556666777777766
Q ss_pred hC------CCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccc
Q 020067 110 LE------IPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLL 149 (331)
Q Consensus 110 ~~------~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~ 149 (331)
+. ..+|+.+|-|+||+++..+=.++|..+.|....+.+..
T Consensus 158 lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAPvl 203 (492)
T KOG2183|consen 158 LKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAPVL 203 (492)
T ss_pred HhhccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCceE
Confidence 63 23899999999999999999999998888877766543
No 197
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=97.25 E-value=0.00031 Score=41.02 Aligned_cols=42 Identities=14% Similarity=0.086 Sum_probs=22.6
Q ss_pred CCCCccceeEeCCCceEEEEeCCC--------CCCCcEEEeccCCCCCCC
Q 020067 19 VEPYSTGILKVSDIHTIYWEQSGN--------PTGHPVVFLHGGPGGGTT 60 (331)
Q Consensus 19 ~~~~~~~~~~~~~g~~l~~~~~g~--------~~~~~vl~~HG~~~~~~~ 60 (331)
..+.+++.+++.||.-|....... +.+|+|++.||..+++..
T Consensus 9 GY~~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~ 58 (63)
T PF04083_consen 9 GYPCEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDD 58 (63)
T ss_dssp T---EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGG
T ss_pred CCCcEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHH
Confidence 456789999999998777654432 246789999996665443
No 198
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=97.22 E-value=0.00074 Score=51.57 Aligned_cols=50 Identities=20% Similarity=0.189 Sum_probs=40.0
Q ss_pred HHHHHHHHHHH---hCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEecccc
Q 020067 99 LIDDIEKLRQH---LEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFL 148 (331)
Q Consensus 99 ~~~~~~~~~~~---~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~ 148 (331)
+.+.+.-+++. .+.++..++|||+||.+++.+...+|+.+...++++|..
T Consensus 120 L~~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSl 172 (264)
T COG2819 120 LTEQLKPFIEARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSL 172 (264)
T ss_pred HHHhhHHHHhcccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecchh
Confidence 34445555554 244578999999999999999999999999999999854
No 199
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=97.17 E-value=0.0016 Score=49.48 Aligned_cols=50 Identities=16% Similarity=0.092 Sum_probs=37.4
Q ss_pred HHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhC----CCceeeEEEeccccch
Q 020067 100 IDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAH----PDKVTGLVLRGIFLLR 150 (331)
Q Consensus 100 ~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~----p~~v~~li~~~~~~~~ 150 (331)
++-+..+++..+ +++.+.|||.||.+|..++... .++|.+++..+++...
T Consensus 72 ~~yl~~~~~~~~-~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPGf~ 125 (224)
T PF11187_consen 72 LAYLKKIAKKYP-GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPGFS 125 (224)
T ss_pred HHHHHHHHHhCC-CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCCCC
Confidence 334444555555 3599999999999999999884 3578999988887654
No 200
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=97.13 E-value=0.0027 Score=50.49 Aligned_cols=62 Identities=16% Similarity=0.064 Sum_probs=48.5
Q ss_pred cccccccEEEEecCCCCccCCcchHHHHHhCCCC-cEEEecCCCCCCCcCCchhHHHHHHHHHHHhhh
Q 020067 262 DNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEA-DFKVVADAGHSANEPGIAAELVATNEKLKNLIK 328 (331)
Q Consensus 262 ~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~ 328 (331)
.++ ..|-.++.|..|.+.+++.+....+.+|+. .+..+|+..|... .+.+.+.|..|+++..
T Consensus 326 ~RL-alpKyivnaSgDdff~pDsa~lYyd~LPG~kaLrmvPN~~H~~~----n~~i~esl~~flnrfq 388 (507)
T COG4287 326 LRL-ALPKYIVNASGDDFFVPDSANLYYDDLPGEKALRMVPNDPHNLI----NQFIKESLEPFLNRFQ 388 (507)
T ss_pred hhc-cccceeecccCCcccCCCccceeeccCCCceeeeeCCCCcchhh----HHHHHHHHHHHHHHHh
Confidence 345 599999999999999999999999999875 5778899999874 4445566666666654
No 201
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=97.02 E-value=0.0048 Score=54.37 Aligned_cols=106 Identities=14% Similarity=0.098 Sum_probs=64.7
Q ss_pred CCcEEEeccCCC---CCC---CCCcccccCCCCcEEEEecCC----CCCCCCCCCCCCccchHHHHHHHHHHHHHh---C
Q 020067 45 GHPVVFLHGGPG---GGT---TPSNRRFFDPDFYRIILFDQR----GAGKSTPHACLDQNTTWDLIDDIEKLRQHL---E 111 (331)
Q Consensus 45 ~~~vl~~HG~~~---~~~---~~~~~~~~~~~g~~vi~~D~~----G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~---~ 111 (331)
-|++|++|||+- +.. .......+..+..-|+.+.+| |+...........+-+.|+...+..+-+.+ |
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~gN~gl~Dq~~AL~wv~~~I~~FG 191 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPGNLGLFDQLLALRWVKDNIPSFG 191 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCCCCcccHHHHHHHHHHHHHHHHhcC
Confidence 588999999642 221 223333344457788888887 332222111123456667776666655444 4
Q ss_pred --CCcEEEEEeChhHHHHHHHHHhC--CCceeeEEEeccccch
Q 020067 112 --IPEWQVFGGSWGSTLALAYSLAH--PDKVTGLVLRGIFLLR 150 (331)
Q Consensus 112 --~~~v~lvG~S~Gg~~a~~~a~~~--p~~v~~li~~~~~~~~ 150 (331)
.++|.++|||.||..+..+...- ...+.++|..++....
T Consensus 192 Gdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~~~ 234 (545)
T KOG1516|consen 192 GDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNALS 234 (545)
T ss_pred CCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhcccccc
Confidence 45899999999999987776532 2456677777665443
No 202
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=96.99 E-value=0.0011 Score=50.07 Aligned_cols=94 Identities=16% Similarity=0.048 Sum_probs=56.2
Q ss_pred EEEecc-CCCC-C--CCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHH----HHHHHHHHHhCC----CcE
Q 020067 48 VVFLHG-GPGG-G--TTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLI----DDIEKLRQHLEI----PEW 115 (331)
Q Consensus 48 vl~~HG-~~~~-~--~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~----~~~~~~~~~~~~----~~v 115 (331)
|=|+-| +.++ . .|..+.+.+.++||.||+.-+.- |.. +..-..+.. ..+..+.+..+. -++
T Consensus 20 ihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~-tfD------H~~~A~~~~~~f~~~~~~L~~~~~~~~~~lP~ 92 (250)
T PF07082_consen 20 IHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVV-TFD------HQAIAREVWERFERCLRALQKRGGLDPAYLPV 92 (250)
T ss_pred EEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCC-CCc------HHHHHHHHHHHHHHHHHHHHHhcCCCcccCCe
Confidence 446666 3333 2 24667778888999999988742 100 111111122 222222222222 267
Q ss_pred EEEEeChhHHHHHHHHHhCCCceeeEEEecccc
Q 020067 116 QVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFL 148 (331)
Q Consensus 116 ~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~ 148 (331)
+-+|||+||-+-+.+...++..-++-|+++-..
T Consensus 93 ~~vGHSlGcklhlLi~s~~~~~r~gniliSFNN 125 (250)
T PF07082_consen 93 YGVGHSLGCKLHLLIGSLFDVERAGNILISFNN 125 (250)
T ss_pred eeeecccchHHHHHHhhhccCcccceEEEecCC
Confidence 889999999999988888766667888887543
No 203
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.98 E-value=0.0019 Score=49.81 Aligned_cols=42 Identities=21% Similarity=0.059 Sum_probs=28.2
Q ss_pred HHHHhCCCcEEEEEeChhHHHHHHHHHhC-----CCceeeEEEeccc
Q 020067 106 LRQHLEIPEWQVFGGSWGSTLALAYSLAH-----PDKVTGLVLRGIF 147 (331)
Q Consensus 106 ~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~-----p~~v~~li~~~~~ 147 (331)
.++.....++++.|||+||.+|..++... +..+..+.+-+|.
T Consensus 121 ~~~~~p~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P~ 167 (229)
T cd00519 121 ALKQYPDYKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQPR 167 (229)
T ss_pred HHhhCCCceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCCC
Confidence 33333456899999999999999988763 2345544444443
No 204
>PLN02162 triacylglycerol lipase
Probab=96.93 E-value=0.003 Score=52.46 Aligned_cols=54 Identities=19% Similarity=0.223 Sum_probs=36.5
Q ss_pred hHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHh---C-----CCceeeEEEeccccc
Q 020067 96 TWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLA---H-----PDKVTGLVLRGIFLL 149 (331)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~---~-----p~~v~~li~~~~~~~ 149 (331)
+.++.+.+..+++.....++++.|||+||.+|..+|.. + .+++.+++..+.+-.
T Consensus 261 y~~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa~L~~~~~~~l~~~~~~vYTFGqPRV 322 (475)
T PLN02162 261 YYTIRQMLRDKLARNKNLKYILTGHSLGGALAALFPAILAIHGEDELLDKLEGIYTFGQPRV 322 (475)
T ss_pred HHHHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHHHHHHccccccccccceEEEeCCCCc
Confidence 44556666666766666789999999999999987652 1 123445666665443
No 205
>PLN00413 triacylglycerol lipase
Probab=96.85 E-value=0.0043 Score=51.72 Aligned_cols=54 Identities=15% Similarity=0.340 Sum_probs=39.1
Q ss_pred hHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHh---C-----CCceeeEEEeccccc
Q 020067 96 TWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLA---H-----PDKVTGLVLRGIFLL 149 (331)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~---~-----p~~v~~li~~~~~~~ 149 (331)
..++.+.+..+++.....++++.|||+||.+|..+|.. + ..++.+++..+++-.
T Consensus 267 yy~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~~L~~~~~~~~~~ri~~VYTFG~PRV 328 (479)
T PLN00413 267 YYTILRHLKEIFDQNPTSKFILSGHSLGGALAILFTAVLIMHDEEEMLERLEGVYTFGQPRV 328 (479)
T ss_pred HHHHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHHHHHhccchhhccccceEEEeCCCCC
Confidence 44667778888888777789999999999999998853 1 224556666665443
No 206
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=96.84 E-value=0.0041 Score=51.91 Aligned_cols=106 Identities=17% Similarity=0.214 Sum_probs=65.9
Q ss_pred CCCcEEEeccCCCCCCCCCcccc------------cC--C-----CCcEEEEec-CCCCCCCCCCCCCCccchHHHHHHH
Q 020067 44 TGHPVVFLHGGPGGGTTPSNRRF------------FD--P-----DFYRIILFD-QRGAGKSTPHACLDQNTTWDLIDDI 103 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~~~~~~~~------------~~--~-----~g~~vi~~D-~~G~G~s~~~~~~~~~~~~~~~~~~ 103 (331)
+.|.|+++.||+|.+..+...-. .. . ..-.+|-+| .-|.|.|.........+.....+|+
T Consensus 100 ~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~~~e~~~d~~~~~~D~ 179 (498)
T COG2939 100 NRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRALGDEKKKDFEGAGKDV 179 (498)
T ss_pred CCceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccCCceEEEecCcccCcccccccccccchhccchhH
Confidence 46789999999887554322111 10 1 224688899 5589988753322345566666666
Q ss_pred HHHHHHh-------C--CCcEEEEEeChhHHHHHHHHHhCCC---ceeeEEEeccccc
Q 020067 104 EKLRQHL-------E--IPEWQVFGGSWGSTLALAYSLAHPD---KVTGLVLRGIFLL 149 (331)
Q Consensus 104 ~~~~~~~-------~--~~~v~lvG~S~Gg~~a~~~a~~~p~---~v~~li~~~~~~~ 149 (331)
..+.+.+ . ..+.+|+|.|+||.-+..+|..--+ ..++++.+.+...
T Consensus 180 ~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvli 237 (498)
T COG2939 180 YSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVLI 237 (498)
T ss_pred HHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeeee
Confidence 6555432 2 2489999999999988888765433 2555665554433
No 207
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=96.71 E-value=0.0015 Score=55.76 Aligned_cols=54 Identities=11% Similarity=-0.007 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHh----CCCcEEEEEeChhHHHHHHHHHhCC---------------CceeeEEEeccccch
Q 020067 97 WDLIDDIEKLRQHL----EIPEWQVFGGSWGSTLALAYSLAHP---------------DKVTGLVLRGIFLLR 150 (331)
Q Consensus 97 ~~~~~~~~~~~~~~----~~~~v~lvG~S~Gg~~a~~~a~~~p---------------~~v~~li~~~~~~~~ 150 (331)
+.+-..+..+++.. +.+||+|+||||||.+++.+...-. ..|++.|.++++...
T Consensus 193 d~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~lG 265 (642)
T PLN02517 193 DQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPFLG 265 (642)
T ss_pred hHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHhccccccccCCcchHHHHHHHHHheecccccCC
Confidence 34445555555433 4579999999999999999876321 247889998876543
No 208
>PLN02454 triacylglycerol lipase
Probab=96.67 E-value=0.0093 Score=49.15 Aligned_cols=35 Identities=23% Similarity=0.309 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHhCCCc--EEEEEeChhHHHHHHHHHh
Q 020067 99 LIDDIEKLRQHLEIPE--WQVFGGSWGSTLALAYSLA 133 (331)
Q Consensus 99 ~~~~~~~~~~~~~~~~--v~lvG~S~Gg~~a~~~a~~ 133 (331)
+...+..+++.....+ |++.|||+||.+|+.+|..
T Consensus 212 vl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 212 LLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 4444555555554444 9999999999999999864
No 209
>PLN02571 triacylglycerol lipase
Probab=96.59 E-value=0.0042 Score=51.16 Aligned_cols=37 Identities=16% Similarity=0.292 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHhCCC--cEEEEEeChhHHHHHHHHHh
Q 020067 97 WDLIDDIEKLRQHLEIP--EWQVFGGSWGSTLALAYSLA 133 (331)
Q Consensus 97 ~~~~~~~~~~~~~~~~~--~v~lvG~S~Gg~~a~~~a~~ 133 (331)
+++.+++..+++....+ ++++.|||+||.+|+.+|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 45667777777776543 68999999999999998875
No 210
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=96.55 E-value=0.0074 Score=44.27 Aligned_cols=76 Identities=13% Similarity=0.021 Sum_probs=45.4
Q ss_pred CCcEEEEecCCCCCCCCCCCCCCccch----HHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHh--C----CCcee
Q 020067 70 DFYRIILFDQRGAGKSTPHACLDQNTT----WDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLA--H----PDKVT 139 (331)
Q Consensus 70 ~g~~vi~~D~~G~G~s~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~--~----p~~v~ 139 (331)
....+..+++|-..... . ...+. .++...+..........+++|+|+|.|+.++..++.. . .++|.
T Consensus 38 ~~~~~~~V~YpA~~~~~--~--y~~S~~~G~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~ 113 (179)
T PF01083_consen 38 TSVAVQGVEYPASLGPN--S--YGDSVAAGVANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIA 113 (179)
T ss_dssp CEEEEEE--S---SCGG--S--CHHHHHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEE
T ss_pred CeeEEEecCCCCCCCcc--c--ccccHHHHHHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEE
Confidence 44666667777432221 0 11233 3344444444455556799999999999999999877 2 35799
Q ss_pred eEEEeccccc
Q 020067 140 GLVLRGIFLL 149 (331)
Q Consensus 140 ~li~~~~~~~ 149 (331)
++++++-+..
T Consensus 114 avvlfGdP~~ 123 (179)
T PF01083_consen 114 AVVLFGDPRR 123 (179)
T ss_dssp EEEEES-TTT
T ss_pred EEEEecCCcc
Confidence 9999986554
No 211
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=96.54 E-value=0.0088 Score=43.40 Aligned_cols=54 Identities=20% Similarity=0.147 Sum_probs=42.4
Q ss_pred hHHHHHHHHHHHHHhC-----CCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccc
Q 020067 96 TWDLIDDIEKLRQHLE-----IPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLL 149 (331)
Q Consensus 96 ~~~~~~~~~~~~~~~~-----~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~ 149 (331)
.+.-+.++..+++.|. ..++.++|||+|+.++-.++...+..+..+|+++++..
T Consensus 87 A~~ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG~ 145 (177)
T PF06259_consen 87 ARAGAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPGM 145 (177)
T ss_pred HHHHHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCCC
Confidence 4556667777776653 23789999999999999998886778999999987654
No 212
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=96.42 E-value=0.0089 Score=44.35 Aligned_cols=65 Identities=12% Similarity=-0.055 Sum_probs=43.6
Q ss_pred CCcEEEEecCCCCCCCCCC-----C--CCCccchHHHHHHHHHHHHHhCC-CcEEEEEeChhHHHHHHHHHhC
Q 020067 70 DFYRIILFDQRGAGKSTPH-----A--CLDQNTTWDLIDDIEKLRQHLEI-PEWQVFGGSWGSTLALAYSLAH 134 (331)
Q Consensus 70 ~g~~vi~~D~~G~G~s~~~-----~--~~~~~~~~~~~~~~~~~~~~~~~-~~v~lvG~S~Gg~~a~~~a~~~ 134 (331)
.-.+|++|=+|-....... . ......+.|+.+.+...+++.+. ++++|+|||.|+.+..++...+
T Consensus 44 ~~~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 44 GVCNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred cCCccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 4567888887743211111 0 00123456677777778888754 5899999999999999998875
No 213
>PLN02408 phospholipase A1
Probab=96.33 E-value=0.0078 Score=48.86 Aligned_cols=37 Identities=22% Similarity=0.215 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHhCCC--cEEEEEeChhHHHHHHHHHhC
Q 020067 98 DLIDDIEKLRQHLEIP--EWQVFGGSWGSTLALAYSLAH 134 (331)
Q Consensus 98 ~~~~~~~~~~~~~~~~--~v~lvG~S~Gg~~a~~~a~~~ 134 (331)
++.+.+..+++....+ ++++.|||+||.+|..+|...
T Consensus 183 qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl 221 (365)
T PLN02408 183 MVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDI 221 (365)
T ss_pred HHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHH
Confidence 3455666677666543 599999999999999988753
No 214
>PLN02934 triacylglycerol lipase
Probab=96.18 E-value=0.01 Score=50.02 Aligned_cols=37 Identities=19% Similarity=0.343 Sum_probs=30.4
Q ss_pred hHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHH
Q 020067 96 TWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSL 132 (331)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~ 132 (331)
.+.+...+..+++.....++++.|||+||.+|..+|.
T Consensus 304 y~~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 304 YYAVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHH
Confidence 3456677777787777779999999999999999875
No 215
>PLN02310 triacylglycerol lipase
Probab=96.17 E-value=0.019 Score=47.33 Aligned_cols=37 Identities=22% Similarity=0.307 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHHhC----CCcEEEEEeChhHHHHHHHHHh
Q 020067 97 WDLIDDIEKLRQHLE----IPEWQVFGGSWGSTLALAYSLA 133 (331)
Q Consensus 97 ~~~~~~~~~~~~~~~----~~~v~lvG~S~Gg~~a~~~a~~ 133 (331)
+++.+.+..+++.+. ..++++.|||+||.+|+.+|..
T Consensus 189 ~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 189 EQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 345566667776653 1379999999999999988854
No 216
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=96.15 E-value=0.0087 Score=49.57 Aligned_cols=55 Identities=16% Similarity=0.040 Sum_probs=38.9
Q ss_pred hHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCC--------ceeeEEEeccccch
Q 020067 96 TWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPD--------KVTGLVLRGIFLLR 150 (331)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~--------~v~~li~~~~~~~~ 150 (331)
+..+..-++...+.-|.+||+|++||||+.+.+.+...+++ .|++.+.++++...
T Consensus 165 l~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyFl~w~~~~~~~W~~k~I~sfvnig~p~lG 227 (473)
T KOG2369|consen 165 LSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYFLKWVEAEGPAWCDKYIKSFVNIGAPWLG 227 (473)
T ss_pred HHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHHHhcccccchhHHHHHHHHHHccCchhcC
Confidence 33344444444444466899999999999999999988876 36777777665543
No 217
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.08 E-value=0.059 Score=37.68 Aligned_cols=78 Identities=10% Similarity=-0.006 Sum_probs=47.5
Q ss_pred cEEEeccCCCCCCCCCcccccCCCCc-EEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCcEEEEEeChhHH
Q 020067 47 PVVFLHGGPGGGTTPSNRRFFDPDFY-RIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGST 125 (331)
Q Consensus 47 ~vl~~HG~~~~~~~~~~~~~~~~~g~-~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~ 125 (331)
.||+.-|++..+...... .+.+++ -++++|+...... .++. ..+.+.+|++|||-+
T Consensus 13 LIvyFaGwgtpps~v~HL--ilpeN~dl~lcYDY~dl~ld--------fDfs-------------Ay~hirlvAwSMGVw 69 (214)
T COG2830 13 LIVYFAGWGTPPSAVNHL--ILPENHDLLLCYDYQDLNLD--------FDFS-------------AYRHIRLVAWSMGVW 69 (214)
T ss_pred EEEEEecCCCCHHHHhhc--cCCCCCcEEEEeehhhcCcc--------cchh-------------hhhhhhhhhhhHHHH
Confidence 667777766544332222 123444 4677888743211 1111 124678999999999
Q ss_pred HHHHHHHhCCCceeeEEEeccccc
Q 020067 126 LALAYSLAHPDKVTGLVLRGIFLL 149 (331)
Q Consensus 126 ~a~~~a~~~p~~v~~li~~~~~~~ 149 (331)
+|-++.... +++..+.+++...
T Consensus 70 vAeR~lqg~--~lksatAiNGTgL 91 (214)
T COG2830 70 VAERVLQGI--RLKSATAINGTGL 91 (214)
T ss_pred HHHHHHhhc--cccceeeecCCCC
Confidence 999998876 4777777776544
No 218
>PLN02324 triacylglycerol lipase
Probab=95.96 E-value=0.015 Score=47.91 Aligned_cols=36 Identities=11% Similarity=0.212 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHhCCC--cEEEEEeChhHHHHHHHHHh
Q 020067 98 DLIDDIEKLRQHLEIP--EWQVFGGSWGSTLALAYSLA 133 (331)
Q Consensus 98 ~~~~~~~~~~~~~~~~--~v~lvG~S~Gg~~a~~~a~~ 133 (331)
++.+.+..+++....+ +|++.|||+||.+|+.+|..
T Consensus 198 qVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 198 QVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 3455666677766533 69999999999999999864
No 219
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=95.94 E-value=0.015 Score=42.19 Aligned_cols=67 Identities=15% Similarity=0.107 Sum_probs=50.6
Q ss_pred hccccccccEEEEecCCCCccCCcchHHHHHhC---C--CCcEEEecCCCCCCCc--CCchhHHHHHHHHHHHh
Q 020067 260 NIDNIRHINATIVQGRYDVCCPMMSAWDLHKAW---P--EADFKVVADAGHSANE--PGIAAELVATNEKLKNL 326 (331)
Q Consensus 260 ~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~---~--~~~~~~~~~~gH~~~~--~~~~~~~~~~i~~fl~~ 326 (331)
...+|++++.|-|-|++|.++.+.......+.+ | ....++.+|+||+-.. ....+++.-.|.+|+.+
T Consensus 128 dp~aI~~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~ 201 (202)
T PF06850_consen 128 DPAAIRRTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQ 201 (202)
T ss_pred chHHcccceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHh
Confidence 455666788999999999999987666555554 4 2456778999998644 34577889999999864
No 220
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=95.94 E-value=0.13 Score=44.31 Aligned_cols=88 Identities=13% Similarity=-0.012 Sum_probs=58.9
Q ss_pred ccccCCCCcEEEEecCCCCCCCCC--C--CCCCccc--------hHHHHHHHHHHHHHh-C--CCcEEEEEeChhHHHHH
Q 020067 64 RRFFDPDFYRIILFDQRGAGKSTP--H--ACLDQNT--------TWDLIDDIEKLRQHL-E--IPEWQVFGGSWGSTLAL 128 (331)
Q Consensus 64 ~~~~~~~g~~vi~~D~~G~G~s~~--~--~~~~~~~--------~~~~~~~~~~~~~~~-~--~~~v~lvG~S~Gg~~a~ 128 (331)
....+++||.++.-|- ||..+.. . ....... +.+.+.--+++++.+ + .+.-+..|.|-||.-++
T Consensus 52 ~~~~~~~G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl 130 (474)
T PF07519_consen 52 MATALARGYATASTDS-GHQGSAGSDDASFGNNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGL 130 (474)
T ss_pred cchhhhcCeEEEEecC-CCCCCcccccccccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHH
Confidence 3445579999999994 6665533 1 1111111 122222233444443 3 34688999999999999
Q ss_pred HHHHhCCCceeeEEEeccccchhh
Q 020067 129 AYSLAHPDKVTGLVLRGIFLLRKK 152 (331)
Q Consensus 129 ~~a~~~p~~v~~li~~~~~~~~~~ 152 (331)
..|+++|+.++|+|.-+|......
T Consensus 131 ~~AQryP~dfDGIlAgaPA~~~~~ 154 (474)
T PF07519_consen 131 MAAQRYPEDFDGILAGAPAINWTH 154 (474)
T ss_pred HHHHhChhhcCeEEeCCchHHHHH
Confidence 999999999999999999876543
No 221
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=95.86 E-value=0.038 Score=44.77 Aligned_cols=40 Identities=20% Similarity=0.171 Sum_probs=32.3
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhCCC-----ceeeEEEeccccch
Q 020067 111 EIPEWQVFGGSWGSTLALAYSLAHPD-----KVTGLVLRGIFLLR 150 (331)
Q Consensus 111 ~~~~v~lvG~S~Gg~~a~~~a~~~p~-----~v~~li~~~~~~~~ 150 (331)
+.+||.|+|||+|+.+...+.....+ .|+.+++++.+...
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~ 262 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPS 262 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCC
Confidence 66789999999999999888765443 38999999876654
No 222
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=95.81 E-value=1 Score=38.24 Aligned_cols=105 Identities=16% Similarity=0.114 Sum_probs=65.2
Q ss_pred EEEEeCCCCCCCcEEEeccCCCCCCC--CCcccccCCCCcE-EEEecCCCCCCCCCCCCCCccc-hHHHHHHHHHHHHHh
Q 020067 35 IYWEQSGNPTGHPVVFLHGGPGGGTT--PSNRRFFDPDFYR-IILFDQRGAGKSTPHACLDQNT-TWDLIDDIEKLRQHL 110 (331)
Q Consensus 35 l~~~~~g~~~~~~vl~~HG~~~~~~~--~~~~~~~~~~g~~-vi~~D~~G~G~s~~~~~~~~~~-~~~~~~~~~~~~~~~ 110 (331)
++|...|+-+.|..|+..|.-....+ +.....+ |.. .+.-|.|=-|.+--.. ... -..+.+-|.+.++.|
T Consensus 279 ~yYFnPGD~KPPL~VYFSGyR~aEGFEgy~MMk~L---g~PfLL~~DpRleGGaFYlG---s~eyE~~I~~~I~~~L~~L 352 (511)
T TIGR03712 279 IYYFNPGDFKPPLNVYFSGYRPAEGFEGYFMMKRL---GAPFLLIGDPRLEGGAFYLG---SDEYEQGIINVIQEKLDYL 352 (511)
T ss_pred EEecCCcCCCCCeEEeeccCcccCcchhHHHHHhc---CCCeEEeeccccccceeeeC---cHHHHHHHHHHHHHHHHHh
Confidence 44555565455667888886443332 2222222 323 4455777776664222 112 345677788889999
Q ss_pred CCC--cEEEEEeChhHHHHHHHHHhCCCceeeEEEeccc
Q 020067 111 EIP--EWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIF 147 (331)
Q Consensus 111 ~~~--~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~ 147 (331)
|.+ .++|-|-|||..-|+.+++... ..++|+--|.
T Consensus 353 gF~~~qLILSGlSMGTfgAlYYga~l~--P~AIiVgKPL 389 (511)
T TIGR03712 353 GFDHDQLILSGLSMGTFGALYYGAKLS--PHAIIVGKPL 389 (511)
T ss_pred CCCHHHeeeccccccchhhhhhcccCC--CceEEEcCcc
Confidence 875 6999999999999999998862 4455554443
No 223
>PLN02802 triacylglycerol lipase
Probab=95.78 E-value=0.019 Score=48.42 Aligned_cols=37 Identities=22% Similarity=0.300 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHhCCC--cEEEEEeChhHHHHHHHHHhC
Q 020067 98 DLIDDIEKLRQHLEIP--EWQVFGGSWGSTLALAYSLAH 134 (331)
Q Consensus 98 ~~~~~~~~~~~~~~~~--~v~lvG~S~Gg~~a~~~a~~~ 134 (331)
++.+.+..+++....+ +|++.|||+||.+|..+|...
T Consensus 313 qVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~dL 351 (509)
T PLN02802 313 SVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADEL 351 (509)
T ss_pred HHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHHH
Confidence 3445566666665432 689999999999999888753
No 224
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.75 E-value=0.14 Score=41.57 Aligned_cols=62 Identities=10% Similarity=-0.006 Sum_probs=50.4
Q ss_pred ccEEEEecCCCCccCCcchHHHHHhC----CCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhhh
Q 020067 267 INATIVQGRYDVCCPMMSAWDLHKAW----PEADFKVVADAGHSANEPGIAAELVATNEKLKNLIK 328 (331)
Q Consensus 267 ~P~l~i~G~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~ 328 (331)
.+.+.+++..|.++|.+..+++.+.. -+++.+-+.++-|..+....|..+.+...+|++...
T Consensus 226 ~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r~~p~~y~~~~~~Fl~~~~ 291 (350)
T KOG2521|consen 226 WNQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFRSFPKTYLKKCSEFLRSVI 291 (350)
T ss_pred ccceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeeccCcHHHHHHHHHHHHhcc
Confidence 78899999999999999888885554 235555667899998887779999999999998653
No 225
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=95.70 E-value=0.11 Score=41.02 Aligned_cols=127 Identities=19% Similarity=0.301 Sum_probs=80.4
Q ss_pred ceeEeCCCceEEEEeC----CC-CCCCcEEEeccCCCCCCC----CCcccccC---C-------CCcEEEEecCC-CCCC
Q 020067 25 GILKVSDIHTIYWEQS----GN-PTGHPVVFLHGGPGGGTT----PSNRRFFD---P-------DFYRIILFDQR-GAGK 84 (331)
Q Consensus 25 ~~~~~~~g~~l~~~~~----g~-~~~~~vl~~HG~~~~~~~----~~~~~~~~---~-------~g~~vi~~D~~-G~G~ 84 (331)
.++++.++.++.|+.+ .. ...|..+.+.|+++++.. +...-++. + +.-.++-+|-| |.|.
T Consensus 6 g~v~vr~~a~~F~wly~~~~~~ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk~adllfvDnPVGaGf 85 (414)
T KOG1283|consen 6 GYVDVRTGAHMFWWLYYATANVKSERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLKDADLLFVDNPVGAGF 85 (414)
T ss_pred cceeeecCceEEEEEeeeccccccCCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhhhccEEEecCCCcCce
Confidence 4566777766665433 22 345678999997765432 11111111 1 34567777776 7888
Q ss_pred CCCCCC-CCccchHHHHHHHHHHHHHh-------CCCcEEEEEeChhHHHHHHHHHhCC---------CceeeEEEeccc
Q 020067 85 STPHAC-LDQNTTWDLIDDIEKLRQHL-------EIPEWQVFGGSWGSTLALAYSLAHP---------DKVTGLVLRGIF 147 (331)
Q Consensus 85 s~~~~~-~~~~~~~~~~~~~~~~~~~~-------~~~~v~lvG~S~Gg~~a~~~a~~~p---------~~v~~li~~~~~ 147 (331)
|..... ....+..+++.|+.++++.+ .-.+++|+..|+||-++..++...- -.+.++++-++.
T Consensus 86 SyVdg~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDSW 165 (414)
T KOG1283|consen 86 SYVDGSSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDSW 165 (414)
T ss_pred eeecCcccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCcc
Confidence 864332 12345678899999998875 3348999999999999988876431 246778877765
Q ss_pred cchh
Q 020067 148 LLRK 151 (331)
Q Consensus 148 ~~~~ 151 (331)
..+.
T Consensus 166 ISP~ 169 (414)
T KOG1283|consen 166 ISPE 169 (414)
T ss_pred cChh
Confidence 5543
No 226
>PLN02753 triacylglycerol lipase
Probab=95.67 E-value=0.022 Score=48.23 Aligned_cols=36 Identities=19% Similarity=0.301 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHhCC-----CcEEEEEeChhHHHHHHHHHh
Q 020067 98 DLIDDIEKLRQHLEI-----PEWQVFGGSWGSTLALAYSLA 133 (331)
Q Consensus 98 ~~~~~~~~~~~~~~~-----~~v~lvG~S~Gg~~a~~~a~~ 133 (331)
++.+.+..+++.... -+|.+.|||+||.+|+.+|..
T Consensus 292 QVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 292 QILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred HHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHH
Confidence 445556666666542 379999999999999999853
No 227
>PLN03037 lipase class 3 family protein; Provisional
Probab=95.52 E-value=0.026 Score=47.77 Aligned_cols=36 Identities=19% Similarity=0.385 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHhCC----CcEEEEEeChhHHHHHHHHHh
Q 020067 98 DLIDDIEKLRQHLEI----PEWQVFGGSWGSTLALAYSLA 133 (331)
Q Consensus 98 ~~~~~~~~~~~~~~~----~~v~lvG~S~Gg~~a~~~a~~ 133 (331)
++.+++..+++.+.. .++.+.|||+||.+|+..|..
T Consensus 299 QVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 299 QVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 455677777766641 269999999999999998854
No 228
>PLN02719 triacylglycerol lipase
Probab=95.50 E-value=0.028 Score=47.52 Aligned_cols=36 Identities=19% Similarity=0.302 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHhCC-----CcEEEEEeChhHHHHHHHHHh
Q 020067 98 DLIDDIEKLRQHLEI-----PEWQVFGGSWGSTLALAYSLA 133 (331)
Q Consensus 98 ~~~~~~~~~~~~~~~-----~~v~lvG~S~Gg~~a~~~a~~ 133 (331)
++.+.+..+++.... .+|.+.|||+||.+|+.+|..
T Consensus 278 QVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 278 QVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 345556666666542 279999999999999998854
No 229
>PLN02761 lipase class 3 family protein
Probab=95.37 E-value=0.033 Score=47.25 Aligned_cols=36 Identities=22% Similarity=0.332 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHhC-----C-CcEEEEEeChhHHHHHHHHHh
Q 020067 98 DLIDDIEKLRQHLE-----I-PEWQVFGGSWGSTLALAYSLA 133 (331)
Q Consensus 98 ~~~~~~~~~~~~~~-----~-~~v~lvG~S~Gg~~a~~~a~~ 133 (331)
++.+.|..+++... . -+|++.|||+||.+|+.+|..
T Consensus 273 qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~D 314 (527)
T PLN02761 273 QVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYD 314 (527)
T ss_pred HHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHH
Confidence 45556666666652 1 269999999999999988853
No 230
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=95.18 E-value=0.047 Score=44.70 Aligned_cols=112 Identities=20% Similarity=0.198 Sum_probs=79.3
Q ss_pred eEEEEeCCCCCCCcEEEeccCCCCC--CCCCcccccCCCCcEEEEecCCCCCCCCCCC-CCCccchHHHHHHHHHHHHHh
Q 020067 34 TIYWEQSGNPTGHPVVFLHGGPGGG--TTPSNRRFFDPDFYRIILFDQRGAGKSTPHA-CLDQNTTWDLIDDIEKLRQHL 110 (331)
Q Consensus 34 ~l~~~~~g~~~~~~vl~~HG~~~~~--~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~-~~~~~~~~~~~~~~~~~~~~~ 110 (331)
++.....+. +.|+|+..-|..-+. ........+ +-+-+.+++|-+|.|.+.+ +....++++-++|...+++.+
T Consensus 53 RvtLlHk~~-drPtV~~T~GY~~~~~p~r~Ept~Ll---d~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~ 128 (448)
T PF05576_consen 53 RVTLLHKDF-DRPTVLYTEGYNVSTSPRRSEPTQLL---DGNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAF 128 (448)
T ss_pred EEEEEEcCC-CCCeEEEecCcccccCccccchhHhh---ccceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHH
Confidence 334444443 568888888844332 112222222 3467889999999998655 344578899999998888776
Q ss_pred C---CCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccc
Q 020067 111 E---IPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLL 149 (331)
Q Consensus 111 ~---~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~ 149 (331)
. .++.+--|-|=||+.++.+=.-+|+.|.+.|.--.+..
T Consensus 129 K~iY~~kWISTG~SKGGmTa~y~rrFyP~DVD~tVaYVAP~~ 170 (448)
T PF05576_consen 129 KPIYPGKWISTGGSKGGMTAVYYRRFYPDDVDGTVAYVAPND 170 (448)
T ss_pred HhhccCCceecCcCCCceeEEEEeeeCCCCCCeeeeeecccc
Confidence 4 35888899999999999888888999999997766543
No 231
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=94.89 E-value=0.01 Score=48.24 Aligned_cols=34 Identities=18% Similarity=0.205 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHH
Q 020067 98 DLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYS 131 (331)
Q Consensus 98 ~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a 131 (331)
..++++.+.+....++++-.+|||+||+++-.+.
T Consensus 135 Rla~~~~e~~~~~si~kISfvghSLGGLvar~AI 168 (405)
T KOG4372|consen 135 RLAEEVKETLYDYSIEKISFVGHSLGGLVARYAI 168 (405)
T ss_pred ccHHHHhhhhhccccceeeeeeeecCCeeeeEEE
Confidence 4555555555555678999999999998876554
No 232
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=94.85 E-value=0.77 Score=43.47 Aligned_cols=97 Identities=16% Similarity=0.124 Sum_probs=62.4
Q ss_pred CCCCcEEEeccCCCCCCC-CCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCC-CcEEEEEe
Q 020067 43 PTGHPVVFLHGGPGGGTT-PSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEI-PEWQVFGG 120 (331)
Q Consensus 43 ~~~~~vl~~HG~~~~~~~-~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~lvG~ 120 (331)
++.|++.|+|...+.... ..++..+ ..|.||.-..... ...++++.++....-++++.. .+..++|+
T Consensus 2121 se~~~~Ffv~pIEG~tt~l~~la~rl----------e~PaYglQ~T~~v-P~dSies~A~~yirqirkvQP~GPYrl~GY 2189 (2376)
T KOG1202|consen 2121 SEEPPLFFVHPIEGFTTALESLASRL----------EIPAYGLQCTEAV-PLDSIESLAAYYIRQIRKVQPEGPYRLAGY 2189 (2376)
T ss_pred ccCCceEEEeccccchHHHHHHHhhc----------CCcchhhhccccC-CcchHHHHHHHHHHHHHhcCCCCCeeeecc
Confidence 367889999996554332 2222222 2344443322211 245788888877666777654 58999999
Q ss_pred ChhHHHHHHHHHhC--CCceeeEEEeccccch
Q 020067 121 SWGSTLALAYSLAH--PDKVTGLVLRGIFLLR 150 (331)
Q Consensus 121 S~Gg~~a~~~a~~~--p~~v~~li~~~~~~~~ 150 (331)
|+|+.++..+|... .+....+|++++.+..
T Consensus 2190 SyG~~l~f~ma~~Lqe~~~~~~lillDGspty 2221 (2376)
T KOG1202|consen 2190 SYGACLAFEMASQLQEQQSPAPLILLDGSPTY 2221 (2376)
T ss_pred chhHHHHHHHHHHHHhhcCCCcEEEecCchHH
Confidence 99999999998754 2345668998876543
No 233
>PLN02847 triacylglycerol lipase
Probab=94.72 E-value=0.067 Score=46.20 Aligned_cols=28 Identities=14% Similarity=0.073 Sum_probs=21.5
Q ss_pred HHHHhCCCcEEEEEeChhHHHHHHHHHh
Q 020067 106 LRQHLEIPEWQVFGGSWGSTLALAYSLA 133 (331)
Q Consensus 106 ~~~~~~~~~v~lvG~S~Gg~~a~~~a~~ 133 (331)
.++....-+++++|||+||.+|..++..
T Consensus 244 al~~~PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 244 ALDEYPDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred HHHHCCCCeEEEeccChHHHHHHHHHHH
Confidence 3334444589999999999999988765
No 234
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=94.72 E-value=0.045 Score=36.39 Aligned_cols=33 Identities=27% Similarity=0.385 Sum_probs=17.8
Q ss_pred eeEeCCCceEEEEeCCC--CCCCcEEEeccCCCCC
Q 020067 26 ILKVSDIHTIYWEQSGN--PTGHPVVFLHGGPGGG 58 (331)
Q Consensus 26 ~~~~~~g~~l~~~~~g~--~~~~~vl~~HG~~~~~ 58 (331)
+...-+|..||+...-+ ++..||||+||+++|-
T Consensus 71 f~t~I~g~~iHFih~rs~~~~aiPLll~HGWPgSf 105 (112)
T PF06441_consen 71 FKTEIDGLDIHFIHVRSKRPNAIPLLLLHGWPGSF 105 (112)
T ss_dssp EEEEETTEEEEEEEE--S-TT-EEEEEE--SS--G
T ss_pred eeEEEeeEEEEEEEeeCCCCCCeEEEEECCCCccH
Confidence 33333577998875542 3456899999999873
No 235
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=94.69 E-value=0.065 Score=43.80 Aligned_cols=37 Identities=24% Similarity=0.157 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHh
Q 020067 97 WDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLA 133 (331)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~ 133 (331)
..+.+++..+++....-++.+.|||+||.+|..+|..
T Consensus 155 ~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHH
Confidence 4677788888888887789999999999999998875
No 236
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=93.87 E-value=0.49 Score=36.21 Aligned_cols=78 Identities=14% Similarity=0.046 Sum_probs=44.3
Q ss_pred CcEEEEecCCCC-CC-CCCCCCCCccchHHHHHHHHHHHHH-h-CCCcEEEEEeChhHHHHHHHHHhCCC------ceee
Q 020067 71 FYRIILFDQRGA-GK-STPHACLDQNTTWDLIDDIEKLRQH-L-EIPEWQVFGGSWGSTLALAYSLAHPD------KVTG 140 (331)
Q Consensus 71 g~~vi~~D~~G~-G~-s~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~v~lvG~S~Gg~~a~~~a~~~p~------~v~~ 140 (331)
|+.+..+++|.. +- +.........+..+=++.+.+.++. . ..++++++|+|+|+.++...+.+.-. ..-.
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~~~~l~ 81 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRLAADGDPPPDDLS 81 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHHHhcCCCCcCceE
Confidence 567777888761 11 0001101233445555555555554 1 23689999999999999988766411 2334
Q ss_pred EEEecccc
Q 020067 141 LVLRGIFL 148 (331)
Q Consensus 141 li~~~~~~ 148 (331)
+|+++-+.
T Consensus 82 fVl~gnP~ 89 (225)
T PF08237_consen 82 FVLIGNPR 89 (225)
T ss_pred EEEecCCC
Confidence 66665443
No 237
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=92.88 E-value=0.71 Score=39.99 Aligned_cols=38 Identities=24% Similarity=0.255 Sum_probs=27.3
Q ss_pred CCcEEEEEeChhHHHHHHHHHh-----CCC------ceeeEEEeccccc
Q 020067 112 IPEWQVFGGSWGSTLALAYSLA-----HPD------KVTGLVLRGIFLL 149 (331)
Q Consensus 112 ~~~v~lvG~S~Gg~~a~~~a~~-----~p~------~v~~li~~~~~~~ 149 (331)
.++++.+||||||.++=.+... .|+ ..+|+|+++.+-.
T Consensus 525 ~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~PHr 573 (697)
T KOG2029|consen 525 DRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVPHR 573 (697)
T ss_pred CCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecCCC
Confidence 4589999999999888766543 233 3677888877643
No 238
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=92.81 E-value=0.12 Score=36.78 Aligned_cols=46 Identities=17% Similarity=0.075 Sum_probs=37.4
Q ss_pred HHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccc
Q 020067 104 EKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLL 149 (331)
Q Consensus 104 ~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~ 149 (331)
..+++..=.....+-|.||||..|..+..++|+.+.++|.+++...
T Consensus 92 rYv~eEalpgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYd 137 (227)
T COG4947 92 RYVIEEALPGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYD 137 (227)
T ss_pred HHHHHhhcCCCccccccchhhhhhhhhheeChhHhhhheeecceee
Confidence 3344444335678889999999999999999999999999998654
No 239
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=90.91 E-value=0.3 Score=42.07 Aligned_cols=100 Identities=18% Similarity=0.031 Sum_probs=55.9
Q ss_pred CCCcEEEeccCCCCCCC----CCccc-ccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHH---HHhC--CC
Q 020067 44 TGHPVVFLHGGPGGGTT----PSNRR-FFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLR---QHLE--IP 113 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~~----~~~~~-~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~---~~~~--~~ 113 (331)
++-.|+-+|||+-.... ....+ ...+-|..|+.+|+.---+.+- ....++..-....++ ..+| .+
T Consensus 395 S~sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL~cPiiSVdYSLAPEaPF-----PRaleEv~fAYcW~inn~allG~TgE 469 (880)
T KOG4388|consen 395 SRSLIVHCHGGGFVAQSSKSHEPYLRSWAQALGCPIISVDYSLAPEAPF-----PRALEEVFFAYCWAINNCALLGSTGE 469 (880)
T ss_pred CceEEEEecCCceeeeccccccHHHHHHHHHhCCCeEEeeeccCCCCCC-----CcHHHHHHHHHHHHhcCHHHhCcccc
Confidence 33457888997643222 11111 1123689999999864433332 223444433333444 3344 36
Q ss_pred cEEEEEeChhHHHHHHHHHh----CCCceeeEEEecccc
Q 020067 114 EWQVFGGSWGSTLALAYSLA----HPDKVTGLVLRGIFL 148 (331)
Q Consensus 114 ~v~lvG~S~Gg~~a~~~a~~----~p~~v~~li~~~~~~ 148 (331)
+|+++|-|.||.+.+..+.+ .-...+|+++.-++.
T Consensus 470 riv~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~pt 508 (880)
T KOG4388|consen 470 RIVLAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYPPT 508 (880)
T ss_pred eEEEeccCCCcceeehhHHHHHHhCCCCCCceEEecChh
Confidence 99999999999766555443 222346777765543
No 240
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=90.83 E-value=0.68 Score=36.09 Aligned_cols=30 Identities=17% Similarity=0.162 Sum_probs=23.8
Q ss_pred HHHHhCCCcEEEEEeChhHHHHHHHHHhCC
Q 020067 106 LRQHLEIPEWQVFGGSWGSTLALAYSLAHP 135 (331)
Q Consensus 106 ~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p 135 (331)
+.+.....++.+-|||+||.+|..+..++.
T Consensus 269 v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T COG5153 269 VRRIYPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred HHHhCCCceEEEeccccchHHHHHhccccC
Confidence 334445568999999999999999988874
No 241
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=90.83 E-value=0.68 Score=36.09 Aligned_cols=30 Identities=17% Similarity=0.162 Sum_probs=23.8
Q ss_pred HHHHhCCCcEEEEEeChhHHHHHHHHHhCC
Q 020067 106 LRQHLEIPEWQVFGGSWGSTLALAYSLAHP 135 (331)
Q Consensus 106 ~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p 135 (331)
+.+.....++.+-|||+||.+|..+..++.
T Consensus 269 v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T KOG4540|consen 269 VRRIYPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred HHHhCCCceEEEeccccchHHHHHhccccC
Confidence 334445568999999999999999988874
No 242
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=88.30 E-value=1.2 Score=38.43 Aligned_cols=62 Identities=13% Similarity=0.016 Sum_probs=46.9
Q ss_pred cccEEEEecCCCCccCCcchHHHHHhC----C--------CCcEEEecCCCCCCCcC-CchhHHHHHHHHHHHhh
Q 020067 266 HINATIVQGRYDVCCPMMSAWDLHKAW----P--------EADFKVVADAGHSANEP-GIAAELVATNEKLKNLI 327 (331)
Q Consensus 266 ~~P~l~i~G~~D~~~~~~~~~~~~~~~----~--------~~~~~~~~~~gH~~~~~-~~~~~~~~~i~~fl~~~ 327 (331)
.-.+++.||..|.++|+.....+.+++ . -.++..+||.+|+.--. ..+-..+..|.+|.++-
T Consensus 353 GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~G 427 (474)
T PF07519_consen 353 GGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVENG 427 (474)
T ss_pred CCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhCC
Confidence 478999999999999999887777654 2 14678889999997543 12556777888887653
No 243
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=86.58 E-value=2.2 Score=36.51 Aligned_cols=43 Identities=16% Similarity=0.120 Sum_probs=33.5
Q ss_pred HhCCCcEEEEEeChhHHHHHHHHHhC-----CCceeeEEEeccccchh
Q 020067 109 HLEIPEWQVFGGSWGSTLALAYSLAH-----PDKVTGLVLRGIFLLRK 151 (331)
Q Consensus 109 ~~~~~~v~lvG~S~Gg~~a~~~a~~~-----p~~v~~li~~~~~~~~~ 151 (331)
..|.+||.|||+|+|+-+.+.+.... -+.|..+++++.|....
T Consensus 443 ~qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~k 490 (633)
T KOG2385|consen 443 SQGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPTK 490 (633)
T ss_pred ccCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccCC
Confidence 34778999999999999998766532 23589999999877654
No 244
>COG3933 Transcriptional antiterminator [Transcription]
Probab=81.21 E-value=2.3 Score=35.68 Aligned_cols=89 Identities=9% Similarity=0.043 Sum_probs=66.5
Q ss_pred CcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCcEEEEEeChhHH
Q 020067 46 HPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGST 125 (331)
Q Consensus 46 ~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~ 125 (331)
..||+.||....++....+..++..+. +.++|+| -+.+..+..+.+.+.+++.+..+=.++=..||..
T Consensus 110 ~vIiiAHG~sTASSmaevanrLL~~~~-~~aiDMP-----------Ldvsp~~vle~l~e~~k~~~~~~GlllLVDMGSL 177 (470)
T COG3933 110 KVIIIAHGYSTASSMAEVANRLLGEEI-FIAIDMP-----------LDVSPSDVLEKLKEYLKERDYRSGLLLLVDMGSL 177 (470)
T ss_pred eEEEEecCcchHHHHHHHHHHHhhccc-eeeecCC-----------CcCCHHHHHHHHHHHHHhcCccCceEEEEecchH
Confidence 468999998877778888888887774 8999998 4678889999999999999888767777899988
Q ss_pred HHHHHHHh--CCCceeeEEEecc
Q 020067 126 LALAYSLA--HPDKVTGLVLRGI 146 (331)
Q Consensus 126 ~a~~~a~~--~p~~v~~li~~~~ 146 (331)
..+.=... ..-.++-+=.+++
T Consensus 178 ~~f~~~i~~~~~ipv~~i~nVST 200 (470)
T COG3933 178 TSFGSIISEEFGIPVKVIPNVST 200 (470)
T ss_pred HHHHHHHHHHhCCceEEEecccH
Confidence 77654433 3333444444443
No 245
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=79.73 E-value=12 Score=24.41 Aligned_cols=73 Identities=12% Similarity=0.142 Sum_probs=46.3
Q ss_pred CCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCcEEEEEeChhH--HHHHHHHHhCCCceeeEEE
Q 020067 70 DFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGS--TLALAYSLAHPDKVTGLVL 143 (331)
Q Consensus 70 ~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg--~~a~~~a~~~p~~v~~li~ 143 (331)
.||..-.+.++..|.+....- .....+.=...+..+++.+...+++++|=|--. -+-..+|.++|++|.++.+
T Consensus 23 ~~~P~G~~~Lr~~~~~~~~~~-~~~~~~~K~~~i~~i~~~fP~~kfiLIGDsgq~DpeiY~~ia~~~P~~i~ai~I 97 (100)
T PF09949_consen 23 NGFPAGPLLLRDYGPSLSGLF-KSGAEEHKRDNIERILRDFPERKFILIGDSGQHDPEIYAEIARRFPGRILAIYI 97 (100)
T ss_pred cCCCCCceEcccCCccccccc-cCCchhHHHHHHHHHHHHCCCCcEEEEeeCCCcCHHHHHHHHHHCCCCEEEEEE
Confidence 445555555665554432210 001113445667788888888999999988665 4445677889999998865
No 246
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=79.02 E-value=2.7 Score=35.01 Aligned_cols=63 Identities=17% Similarity=0.046 Sum_probs=41.6
Q ss_pred hccccccccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCc----CCchhHHHHHHHHHHH
Q 020067 260 NIDNIRHINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANE----PGIAAELVATNEKLKN 325 (331)
Q Consensus 260 ~l~~i~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~----~~~~~~~~~~i~~fl~ 325 (331)
-+++- .-.+|+|+|++|++.-... .+-+.-.++.+.+.||++|.... +....+....|.+|..
T Consensus 346 Wvr~~-~~rmlFVYG~nDPW~A~~f--~l~~g~~ds~v~~~PggnHga~I~~L~~~~r~~a~a~l~~WaG 412 (448)
T PF05576_consen 346 WVRNN-GPRMLFVYGENDPWSAEPF--RLGKGKRDSYVFTAPGGNHGARIAGLPEAERAEATARLRRWAG 412 (448)
T ss_pred HHHhC-CCeEEEEeCCCCCcccCcc--ccCCCCcceEEEEcCCCcccccccCCCHHHHHHHHHHHHHHcC
Confidence 34444 4789999999999864221 12222246778888999997643 2336677778888864
No 247
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=75.39 E-value=2.6 Score=34.41 Aligned_cols=29 Identities=28% Similarity=0.204 Sum_probs=23.8
Q ss_pred HHHHHHhCCCcEEEEEeChhHHHHHHHHH
Q 020067 104 EKLRQHLEIPEWQVFGGSWGSTLALAYSL 132 (331)
Q Consensus 104 ~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~ 132 (331)
..+++..|+++-.++|||+|=+.|+.++.
T Consensus 75 ~~~l~~~Gi~P~~v~GhSlGE~aA~~aaG 103 (318)
T PF00698_consen 75 ARLLRSWGIKPDAVIGHSLGEYAALVAAG 103 (318)
T ss_dssp HHHHHHTTHCESEEEESTTHHHHHHHHTT
T ss_pred hhhhcccccccceeeccchhhHHHHHHCC
Confidence 45567788899999999999998887754
No 248
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=74.68 E-value=4.5 Score=32.64 Aligned_cols=29 Identities=21% Similarity=0.129 Sum_probs=23.8
Q ss_pred HHHHHHhCCCcEEEEEeChhHHHHHHHHH
Q 020067 104 EKLRQHLEIPEWQVFGGSWGSTLALAYSL 132 (331)
Q Consensus 104 ~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~ 132 (331)
..+++..|+++-.++|||+|-+.|+.++.
T Consensus 73 ~~~l~~~Gi~p~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 73 ARLWRSWGVRPDAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred HHHHHHcCCcccEEEecCHHHHHHHHHhC
Confidence 34567788999999999999999887764
No 249
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=72.48 E-value=5.5 Score=32.09 Aligned_cols=30 Identities=20% Similarity=-0.105 Sum_probs=23.9
Q ss_pred HHHHHHhCCCcEEEEEeChhHHHHHHHHHh
Q 020067 104 EKLRQHLEIPEWQVFGGSWGSTLALAYSLA 133 (331)
Q Consensus 104 ~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~ 133 (331)
..++...+.++..++|||+|=..|+.++..
T Consensus 67 ~~~l~~~g~~P~~v~GhS~GE~aAa~~aG~ 96 (295)
T TIGR03131 67 WRALLALLPRPSAVAGYSVGEYAAAVVAGV 96 (295)
T ss_pred HHHHHhcCCCCcEEeecCHHHHHHHHHhCC
Confidence 344567788999999999999888877643
No 250
>PRK10279 hypothetical protein; Provisional
Probab=71.52 E-value=6.7 Score=31.71 Aligned_cols=32 Identities=25% Similarity=0.204 Sum_probs=26.1
Q ss_pred HHHHHHHhCCCcEEEEEeChhHHHHHHHHHhC
Q 020067 103 IEKLRQHLEIPEWQVFGGSWGSTLALAYSLAH 134 (331)
Q Consensus 103 ~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~ 134 (331)
+.+.++..++..-.++|.|+|+.++..+|...
T Consensus 23 VL~aL~E~gi~~d~i~GtS~GAlvga~yA~g~ 54 (300)
T PRK10279 23 VINALKKVGIEIDIVAGCSIGSLVGAAYACDR 54 (300)
T ss_pred HHHHHHHcCCCcCEEEEEcHHHHHHHHHHcCC
Confidence 34455667888888999999999999999764
No 251
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=70.77 E-value=5.2 Score=35.20 Aligned_cols=36 Identities=19% Similarity=0.028 Sum_probs=28.8
Q ss_pred EEEEEeChhHHHHHHHHHhC-CCceeeEEEeccccch
Q 020067 115 WQVFGGSWGSTLALAYSLAH-PDKVTGLVLRGIFLLR 150 (331)
Q Consensus 115 v~lvG~S~Gg~~a~~~a~~~-p~~v~~li~~~~~~~~ 150 (331)
|+.-+.|-||..++.+|.+. ...|.+++...|....
T Consensus 287 VIAssvSNGGgAal~AAEqD~~glIdgVvv~EP~v~~ 323 (690)
T PF10605_consen 287 VIASSVSNGGGAALAAAEQDTQGLIDGVVVSEPNVNL 323 (690)
T ss_pred EEEEeecCccHHHHhHhhcccCCceeeEEecCCccCC
Confidence 55668999999999999886 3479999988876543
No 252
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=70.75 E-value=7.6 Score=30.70 Aligned_cols=89 Identities=15% Similarity=0.071 Sum_probs=49.1
Q ss_pred cccccCCCCcEEEEecCCCCC--CCCCCC-CCCccchHHHHHHHHHHHHHhCC---CcEEEEEeChhHHHHHHHHHh---
Q 020067 63 NRRFFDPDFYRIILFDQRGAG--KSTPHA-CLDQNTTWDLIDDIEKLRQHLEI---PEWQVFGGSWGSTLALAYSLA--- 133 (331)
Q Consensus 63 ~~~~~~~~g~~vi~~D~~G~G--~s~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~v~lvG~S~Gg~~a~~~a~~--- 133 (331)
-++++..-+..+++..|---- .|--.. ......-..+.+.+...++.+.. .|++|.|.|+|+.-+...-..
T Consensus 53 a~E~l~~GD~A~va~QYSylPSw~sfl~dr~~a~~a~~aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa~g~~~af~~~~~ 132 (289)
T PF10081_consen 53 ALEYLYGGDVAIVAMQYSYLPSWLSFLVDRDAAREAARALFEAVYARWSTLPEDRRPKLYLYGESLGAYGGEAAFDGLDD 132 (289)
T ss_pred HHHHHhCCCeEEEEeccccccchHHHhcccchHHHHHHHHHHHHHHHHHhCCcccCCeEEEeccCccccchhhhhccHHH
Confidence 444555566777777764211 010000 00111222344444444555532 379999999999876654332
Q ss_pred CCCceeeEEEeccccchh
Q 020067 134 HPDKVTGLVLRGIFLLRK 151 (331)
Q Consensus 134 ~p~~v~~li~~~~~~~~~ 151 (331)
.-+++.|.+..+++....
T Consensus 133 ~~~~vdGalw~GpP~~s~ 150 (289)
T PF10081_consen 133 LRDRVDGALWVGPPFFSP 150 (289)
T ss_pred hhhhcceEEEeCCCCCCh
Confidence 235799999999877643
No 253
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=70.74 E-value=3.4 Score=29.60 Aligned_cols=51 Identities=16% Similarity=0.276 Sum_probs=30.8
Q ss_pred EEecCCCCCCCCC-CCCCCccchHHHHHHH----HHHHHHhC----CCcEEEEEeChhHH
Q 020067 75 ILFDQRGAGKSTP-HACLDQNTTWDLIDDI----EKLRQHLE----IPEWQVFGGSWGST 125 (331)
Q Consensus 75 i~~D~~G~G~s~~-~~~~~~~~~~~~~~~~----~~~~~~~~----~~~v~lvG~S~Gg~ 125 (331)
+-+-+-|||.... ......++.++++.-+ ..+.+..+ .++|.|+|+|++..
T Consensus 57 ~rw~lVGHG~~~~~~~~l~g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 57 VRWQLVGHGRDEFNNQTLAGYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp EEEEEE--EESSTSSSEETTEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred ceEEEEEeCCCcCCCceeCCCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 3444558887721 1122467888999888 55555553 45899999999987
No 254
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=70.67 E-value=7.7 Score=31.48 Aligned_cols=33 Identities=24% Similarity=0.215 Sum_probs=26.4
Q ss_pred HHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhC
Q 020067 102 DIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAH 134 (331)
Q Consensus 102 ~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~ 134 (331)
-+.+.++..++..-.++|.|+|+.++..+|...
T Consensus 32 GvL~aLee~gi~~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 32 GVIKALEEAGIPVDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred HHHHHHHHcCCCCCEEEEECHHHHHHHHHHcCC
Confidence 344556666887778999999999999999875
No 255
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=69.98 E-value=9.1 Score=27.91 Aligned_cols=32 Identities=16% Similarity=-0.026 Sum_probs=24.8
Q ss_pred HHHHHHhCCCcEEEEEeChhHHHHHHHHHhCC
Q 020067 104 EKLRQHLEIPEWQVFGGSWGSTLALAYSLAHP 135 (331)
Q Consensus 104 ~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p 135 (331)
.+.++..++..-.+.|-|.|+.++..++...+
T Consensus 17 l~aL~e~gi~~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 17 AKALRERGPLIDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred HHHHHHcCCCCCEEEEECHHHHHHHHHHcCCC
Confidence 33444557777889999999999999998653
No 256
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=69.94 E-value=18 Score=27.26 Aligned_cols=66 Identities=11% Similarity=-0.009 Sum_probs=47.0
Q ss_pred CCCc-EEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCcEEEEEeCh----hHHHHHHHHHhCC-CceeeEE
Q 020067 69 PDFY-RIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSW----GSTLALAYSLAHP-DKVTGLV 142 (331)
Q Consensus 69 ~~g~-~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG~S~----Gg~~a~~~a~~~p-~~v~~li 142 (331)
..|. +|+..|.+.. ..++.+.+++.+.++++..+ ..++++|+|. |..++-.+|.+.. ..+..++
T Consensus 74 ~~G~d~V~~~~~~~~---------~~~~~e~~a~al~~~i~~~~-p~lVL~~~t~~~~~grdlaprlAarLga~lvsdv~ 143 (202)
T cd01714 74 AMGADRAILVSDRAF---------AGADTLATAKALAAAIKKIG-VDLILTGKQSIDGDTGQVGPLLAELLGWPQITYVS 143 (202)
T ss_pred HcCCCEEEEEecccc---------cCCChHHHHHHHHHHHHHhC-CCEEEEcCCcccCCcCcHHHHHHHHhCCCccceEE
Confidence 3454 6777765532 34678889999999998887 5799999998 8888888888752 2444455
Q ss_pred Ee
Q 020067 143 LR 144 (331)
Q Consensus 143 ~~ 144 (331)
.+
T Consensus 144 ~l 145 (202)
T cd01714 144 KI 145 (202)
T ss_pred EE
Confidence 44
No 257
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=67.72 E-value=7.5 Score=31.19 Aligned_cols=29 Identities=21% Similarity=-0.024 Sum_probs=22.7
Q ss_pred HHHHHhC-CCcEEEEEeChhHHHHHHHHHh
Q 020067 105 KLRQHLE-IPEWQVFGGSWGSTLALAYSLA 133 (331)
Q Consensus 105 ~~~~~~~-~~~v~lvG~S~Gg~~a~~~a~~ 133 (331)
.++...+ +.+..++|||+|=+.|+.++..
T Consensus 74 ~~l~~~g~i~p~~v~GhS~GE~aAa~~aG~ 103 (290)
T TIGR00128 74 LKLKEQGGLKPDFAAGHSLGEYSALVAAGA 103 (290)
T ss_pred HHHHHcCCCCCCEEeecCHHHHHHHHHhCC
Confidence 3445566 8899999999999988877643
No 258
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=67.15 E-value=9.5 Score=31.00 Aligned_cols=34 Identities=24% Similarity=0.222 Sum_probs=28.1
Q ss_pred HHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCC
Q 020067 102 DIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHP 135 (331)
Q Consensus 102 ~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p 135 (331)
-+.+.++..++..-.+.|-|+|+.++..+|....
T Consensus 28 GVl~aL~e~gi~~~~iaGtS~GAiva~l~A~g~~ 61 (306)
T COG1752 28 GVLKALEEAGIPIDVIAGTSAGAIVAALYAAGMD 61 (306)
T ss_pred HHHHHHHHcCCCccEEEecCHHHHHHHHHHcCCC
Confidence 3455677778889999999999999999998653
No 259
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=67.02 E-value=11 Score=28.11 Aligned_cols=30 Identities=27% Similarity=0.171 Sum_probs=23.3
Q ss_pred HHHHHhCCCcEEEEEeChhHHHHHHHHHhC
Q 020067 105 KLRQHLEIPEWQVFGGSWGSTLALAYSLAH 134 (331)
Q Consensus 105 ~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~ 134 (331)
..++..+...-.++|-|.||.++..++...
T Consensus 19 ~~L~e~~~~~d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 19 KALEEAGILKKRVAGTSAGAITAALLALGY 48 (194)
T ss_pred HHHHHcCCCcceEEEECHHHHHHHHHHcCC
Confidence 334455667778999999999999998753
No 260
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=65.17 E-value=14 Score=28.41 Aligned_cols=29 Identities=10% Similarity=0.067 Sum_probs=22.8
Q ss_pred HHHHhCCCcEEEEEeChhHHHHHHHHHhC
Q 020067 106 LRQHLEIPEWQVFGGSWGSTLALAYSLAH 134 (331)
Q Consensus 106 ~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~ 134 (331)
.++..+.+.-.++|-|.|+.++..+|...
T Consensus 21 aL~e~gi~~~~i~GtSaGAi~aa~~a~g~ 49 (221)
T cd07210 21 ALLEMGLEPSAISGTSAGALVGGLFASGI 49 (221)
T ss_pred HHHHcCCCceEEEEeCHHHHHHHHHHcCC
Confidence 34445667778999999999999998754
No 261
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=64.30 E-value=12 Score=29.73 Aligned_cols=32 Identities=25% Similarity=0.168 Sum_probs=25.7
Q ss_pred HHHHHHHhCCCcEEEEEeChhHHHHHHHHHhC
Q 020067 103 IEKLRQHLEIPEWQVFGGSWGSTLALAYSLAH 134 (331)
Q Consensus 103 ~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~ 134 (331)
+...++..++..-.+.|.|+|+.++..+|...
T Consensus 28 VL~aLeE~gi~~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 28 ILQALEEAGIPIDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred HHHHHHHcCCCccEEEEECHHHHHHHHHHcCC
Confidence 44455667887778999999999999999864
No 262
>PRK12467 peptide synthase; Provisional
Probab=64.18 E-value=21 Score=40.51 Aligned_cols=97 Identities=12% Similarity=-0.033 Sum_probs=61.1
Q ss_pred CcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhC-CCcEEEEEeChhH
Q 020067 46 HPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLE-IPEWQVFGGSWGS 124 (331)
Q Consensus 46 ~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~lvG~S~Gg 124 (331)
+.+++.|...+....+......+..+..++.+..++.-.... ...+++.++......+.... ..+..+.|+|+||
T Consensus 3693 ~~l~~~h~~~r~~~~~~~l~~~l~~~~~~~~l~~~~~~~d~~----~~~~~~~~~~~y~~~~~~~~~~~p~~l~g~s~g~ 3768 (3956)
T PRK12467 3693 PALFCRHEGLGTVFDYEPLAVILEGDRHVLGLTCRHLLDDGW----QDTSLQAMAVQYADYILWQQAKGPYGLLGWSLGG 3768 (3956)
T ss_pred cceeeechhhcchhhhHHHHHHhCCCCcEEEEeccccccccC----CccchHHHHHHHHHHHHHhccCCCeeeeeeecch
Confidence 458999997665443333333345567888887766432222 12356666666666665554 3478999999999
Q ss_pred HHHHHHHHh---CCCceeeEEEecc
Q 020067 125 TLALAYSLA---HPDKVTGLVLRGI 146 (331)
Q Consensus 125 ~~a~~~a~~---~p~~v~~li~~~~ 146 (331)
.++..++.. ..+.+.-+.++..
T Consensus 3769 ~~a~~~~~~l~~~g~~~~~~~~~~~ 3793 (3956)
T PRK12467 3769 TLARLVAELLEREGESEAFLGLFDN 3793 (3956)
T ss_pred HHHHHHHHHHHHcCCceeEEEEEec
Confidence 999888764 3445555555543
No 263
>COG1576 Uncharacterized conserved protein [Function unknown]
Probab=62.09 E-value=30 Score=24.62 Aligned_cols=53 Identities=25% Similarity=0.295 Sum_probs=35.5
Q ss_pred CCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHH
Q 020067 69 PDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSL 132 (331)
Q Consensus 69 ~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~ 132 (331)
..|-.|++.|.+|- ..+.+++++.+..+.+. |-+=.+++|-|.|=.-++...+
T Consensus 65 ~~~~~vi~Ld~~Gk----------~~sSe~fA~~l~~~~~~-G~~i~f~IGG~~Gl~~~~~~~a 117 (155)
T COG1576 65 PKGSYVVLLDIRGK----------ALSSEEFADFLERLRDD-GRDISFLIGGADGLSEAVKARA 117 (155)
T ss_pred CCCCeEEEEecCCC----------cCChHHHHHHHHHHHhc-CCeEEEEEeCcccCCHHHHHHH
Confidence 46778999999973 44566777777665443 4234668899999665555433
No 264
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=61.35 E-value=20 Score=31.70 Aligned_cols=51 Identities=8% Similarity=0.094 Sum_probs=34.4
Q ss_pred hHHHHHHHHHHHHHhCCCcEEEEEe------ChhHHHHHHHHHhCCCceeeEEEeccccc
Q 020067 96 TWDLIDDIEKLRQHLEIPEWQVFGG------SWGSTLALAYSLAHPDKVTGLVLRGIFLL 149 (331)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~v~lvG~------S~Gg~~a~~~a~~~p~~v~~li~~~~~~~ 149 (331)
...+...+.+.+.. .++|+++|| |.|+.+++..-+..-.+ .+.+.++|.-.
T Consensus 323 aRvis~al~d~i~e--~d~VfImGHk~pDmDalGsAig~~~~A~~~~~-~a~~v~dp~~~ 379 (655)
T COG3887 323 ARVISTALSDIIKE--SDNVFIMGHKFPDMDALGSAIGMQKFASMNNK-EAFAVLDPEDM 379 (655)
T ss_pred HHHHHHHHHHHHhh--cCcEEEEccCCCChHHHHHHHHHHHHHHhccc-ccEEEECcccc
Confidence 33444455555544 579999999 78999999776665444 66777776443
No 265
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=60.76 E-value=26 Score=29.46 Aligned_cols=102 Identities=15% Similarity=0.016 Sum_probs=60.0
Q ss_pred CCCcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCC----CCCCCCccchHHHHHHHHHHHHHhCCCcEEEEE
Q 020067 44 TGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKST----PHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFG 119 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG 119 (331)
.+..+++.--.+.....+.....+.+.+.-|+-.|..++-... ....+....++.++.+++.....-....-+|.|
T Consensus 48 ~~~villSd~~G~~d~~~s~a~al~~~~Alv~~vd~~~ylaaL~~dd~ecvylisd~Ealsr~~Qr~a~~g~yr~PVl~g 127 (456)
T COG3946 48 QGLVILLSDEAGIGDQERSRADALLARGALVAPVDLGAYLAALGADDNECVYLISDFEALSREAQRAADLGVYRLPVLTG 127 (456)
T ss_pred ceeeEEEEcccChhhhhcchhHHHhhcCCeeeccccchhhhccccCCCcceEEehhHHHHhHHHHHHhhccCcccceEee
Confidence 3443333332333444566777777889999999988764332 221112234455555554444333344567889
Q ss_pred eChhHHHHHHHHHhCCCc-eeeEEEec
Q 020067 120 GSWGSTLALAYSLAHPDK-VTGLVLRG 145 (331)
Q Consensus 120 ~S~Gg~~a~~~a~~~p~~-v~~li~~~ 145 (331)
---||.++...+++.|+. +.+.+..+
T Consensus 128 ~g~Gg~~A~asaaqSp~atlag~Vsld 154 (456)
T COG3946 128 PGQGGTLAYASAAQSPDATLAGAVSLD 154 (456)
T ss_pred cCCCcHHHHHHHhhChhhhhcCccCCC
Confidence 999999999998887652 44444443
No 266
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=59.83 E-value=28 Score=21.36 Aligned_cols=25 Identities=28% Similarity=0.141 Sum_probs=19.2
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhCC
Q 020067 111 EIPEWQVFGGSWGSTLALAYSLAHP 135 (331)
Q Consensus 111 ~~~~v~lvG~S~Gg~~a~~~a~~~p 135 (331)
+.+++.++|-|.|=.+|.+.++.+.
T Consensus 38 GpK~VLViGaStGyGLAsRIa~aFg 62 (78)
T PF12242_consen 38 GPKKVLVIGASTGYGLASRIAAAFG 62 (78)
T ss_dssp S-SEEEEES-SSHHHHHHHHHHHHC
T ss_pred CCceEEEEecCCcccHHHHHHHHhc
Confidence 4568999999999999988887763
No 267
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=59.30 E-value=17 Score=27.67 Aligned_cols=32 Identities=19% Similarity=0.044 Sum_probs=25.1
Q ss_pred HHHHHHhCCCcEEEEEeChhHHHHHHHHHhCC
Q 020067 104 EKLRQHLEIPEWQVFGGSWGSTLALAYSLAHP 135 (331)
Q Consensus 104 ~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p 135 (331)
.+.++..+...-.+.|.|.|+..+..++...+
T Consensus 17 l~aL~e~g~~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 17 LKALAEAGIEPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHHcCCCCCEEEEECHHHHHHHHHHcCCc
Confidence 33445557666789999999999999998765
No 268
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=58.53 E-value=13 Score=32.78 Aligned_cols=31 Identities=19% Similarity=0.026 Sum_probs=25.6
Q ss_pred HHHH-HHhCCCcEEEEEeChhHHHHHHHHHhC
Q 020067 104 EKLR-QHLEIPEWQVFGGSWGSTLALAYSLAH 134 (331)
Q Consensus 104 ~~~~-~~~~~~~v~lvG~S~Gg~~a~~~a~~~ 134 (331)
..++ +..|+++-.++|||+|=..++..|.-.
T Consensus 255 a~ll~~~~GI~Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 255 TQLLCDEFAIKPDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred HHHHHHhcCCCCCEEeecCHHHHHHHHHhCCC
Confidence 3444 578999999999999999999888755
No 269
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=57.81 E-value=19 Score=26.32 Aligned_cols=30 Identities=20% Similarity=0.171 Sum_probs=23.3
Q ss_pred HHHHhCCCcEEEEEeChhHHHHHHHHHhCC
Q 020067 106 LRQHLEIPEWQVFGGSWGSTLALAYSLAHP 135 (331)
Q Consensus 106 ~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p 135 (331)
.++..+...-.++|-|.|+.++..++...+
T Consensus 21 ~L~e~g~~~d~i~GtSaGAi~aa~~a~g~~ 50 (175)
T cd07228 21 ALEEEGIEIDIIAGSSIGALVGALYAAGHL 50 (175)
T ss_pred HHHHCCCCeeEEEEeCHHHHHHHHHHcCCC
Confidence 334556666779999999999999987654
No 270
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=56.97 E-value=7 Score=26.73 Aligned_cols=19 Identities=37% Similarity=0.534 Sum_probs=14.9
Q ss_pred CCCCCCcEEEeccCCCCCC
Q 020067 41 GNPTGHPVVFLHGGPGGGT 59 (331)
Q Consensus 41 g~~~~~~vl~~HG~~~~~~ 59 (331)
..+++|.|+-+||++|.+-
T Consensus 48 ~~p~KpLVlSfHG~tGtGK 66 (127)
T PF06309_consen 48 PNPRKPLVLSFHGWTGTGK 66 (127)
T ss_pred CCCCCCEEEEeecCCCCcH
Confidence 4567888999999887654
No 271
>TIGR00067 glut_race glutamate racemase. The most closely related proteins differing in function are aspartate racemases.
Probab=56.91 E-value=43 Score=26.33 Aligned_cols=46 Identities=13% Similarity=0.138 Sum_probs=38.4
Q ss_pred cchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhhh
Q 020067 283 MSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNLIK 328 (331)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~ 328 (331)
...+.+.+.+|+.+++.+-+..|+++-++..+++.+.+.+-++.+.
T Consensus 12 tv~~~l~~~~p~~~~iy~~D~~~~PYG~ks~~~i~~~~~~~~~~L~ 57 (251)
T TIGR00067 12 SVLKEIRKQLPKEHYIYVGDTKRFPYGEKSPEFILEYVLELLTFLK 57 (251)
T ss_pred HHHHHHHHHCCCCCEEEEecCCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 3567888899999999999999999988878888888877776664
No 272
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=54.98 E-value=27 Score=25.45 Aligned_cols=29 Identities=24% Similarity=0.188 Sum_probs=22.2
Q ss_pred HHHHhCCCcEEEEEeChhHHHHHHHHHhC
Q 020067 106 LRQHLEIPEWQVFGGSWGSTLALAYSLAH 134 (331)
Q Consensus 106 ~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~ 134 (331)
.++..+...-.++|-|.|+.++..++...
T Consensus 21 ~L~~~~~~~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 21 ALEEAGIPIDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred HHHHcCCCeeEEEEECHHHHHHHHHHcCC
Confidence 34445666668999999999999998654
No 273
>COG0796 MurI Glutamate racemase [Cell envelope biogenesis, outer membrane]
Probab=54.28 E-value=47 Score=26.36 Aligned_cols=60 Identities=8% Similarity=0.130 Sum_probs=45.5
Q ss_pred cccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhhh
Q 020067 266 HINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNLIK 328 (331)
Q Consensus 266 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~ 328 (331)
+.|+.++=+ -+-.....+++.+.+|+.+++.+-+..++++-+...+++.+...+-++.+.
T Consensus 5 ~~~IgvFDS---GVGGLsVlrei~~~LP~e~~iY~~D~a~~PYG~ks~e~I~~~~~~i~~~l~ 64 (269)
T COG0796 5 QPPIGVFDS---GVGGLSVLREIRRQLPDEDIIYVGDTARFPYGEKSEEEIRERTLEIVDFLL 64 (269)
T ss_pred CCeEEEEEC---CCCcHHHHHHHHHHCCCCcEEEEecCCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 357777622 233356788999999999999999999999988777777777776666554
No 274
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=53.55 E-value=1.4e+02 Score=26.23 Aligned_cols=55 Identities=16% Similarity=0.067 Sum_probs=30.1
Q ss_pred cchHHHHHHHHHH---HHHhCC--CcEEEEEeChhHHHHHHHHHh--CCCceeeEEEecccc
Q 020067 94 NTTWDLIDDIEKL---RQHLEI--PEWQVFGGSWGSTLALAYSLA--HPDKVTGLVLRGIFL 148 (331)
Q Consensus 94 ~~~~~~~~~~~~~---~~~~~~--~~v~lvG~S~Gg~~a~~~a~~--~p~~v~~li~~~~~~ 148 (331)
..+-|+.-.+..+ +..+|. ++|.|+|.|.|+.-...-... ....++..|+-++..
T Consensus 194 mGl~DQqLAl~WV~~Ni~aFGGnp~~vTLFGESAGaASv~aHLlsP~S~glF~raIlQSGS~ 255 (601)
T KOG4389|consen 194 MGLLDQQLALQWVQENIAAFGGNPSRVTLFGESAGAASVVAHLLSPGSRGLFHRAILQSGSL 255 (601)
T ss_pred cchHHHHHHHHHHHHhHHHhCCCcceEEEeccccchhhhhheecCCCchhhHHHHHhhcCCC
Confidence 3444444444444 445553 579999999998644322211 112456666655544
No 275
>PRK00865 glutamate racemase; Provisional
Probab=52.93 E-value=53 Score=26.03 Aligned_cols=59 Identities=7% Similarity=0.103 Sum_probs=43.6
Q ss_pred ccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhhh
Q 020067 267 INATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNLIK 328 (331)
Q Consensus 267 ~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~ 328 (331)
.|+.++=+ -+-.....+++.+.+|+..++.+-+..|+++-++..+++.+.+.+-++.+.
T Consensus 6 ~~IgvfDS---GiGGLtvl~~i~~~lp~~~~iY~~D~~~~PYG~ks~~~i~~~~~~~~~~L~ 64 (261)
T PRK00865 6 APIGVFDS---GVGGLTVLREIRRLLPDEHIIYVGDTARFPYGEKSEEEIRERTLEIVEFLL 64 (261)
T ss_pred CeEEEEEC---CccHHHHHHHHHHHCCCCCEEEEecCCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 45555522 222345778899999999999999999999988777877777776666554
No 276
>PF02590 SPOUT_MTase: Predicted SPOUT methyltransferase; InterPro: IPR003742 This family of proteins are predicted to be SPOUT methyltransferases []. ; GO: 0008168 methyltransferase activity, 0006364 rRNA processing, 0005737 cytoplasm; PDB: 1VH0_E 4FAK_A 1TO0_G 1O6D_A 1NS5_B.
Probab=52.36 E-value=37 Score=24.34 Aligned_cols=67 Identities=16% Similarity=0.211 Sum_probs=36.7
Q ss_pred CCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEecccc
Q 020067 69 PDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFL 148 (331)
Q Consensus 69 ~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~ 148 (331)
..+-.+|+.|-.| ...+.+++++.+..+...-..+=++++|-+.|=.-.+.- +....+.+++..
T Consensus 65 ~~~~~~i~Ld~~G----------k~~sS~~fA~~l~~~~~~g~~~i~F~IGG~~G~~~~~~~------~a~~~lSLS~mT 128 (155)
T PF02590_consen 65 PPNDYVILLDERG----------KQLSSEEFAKKLERWMNQGKSDIVFIIGGADGLSEEVRK------RADEKLSLSKMT 128 (155)
T ss_dssp HTTSEEEEE-TTS----------EE--HHHHHHHHHHHHHTTS-EEEEEE-BTTB--HHHHH------H-SEEEES-SS-
T ss_pred cCCCEEEEEcCCC----------ccCChHHHHHHHHHHHhcCCceEEEEEecCCCCCHHHHh------hcCceEEEecCC
Confidence 3567799999887 356777888888877766333447789999984332222 233566666665
Q ss_pred chh
Q 020067 149 LRK 151 (331)
Q Consensus 149 ~~~ 151 (331)
.++
T Consensus 129 fpH 131 (155)
T PF02590_consen 129 FPH 131 (155)
T ss_dssp --H
T ss_pred CcH
Confidence 543
No 277
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=51.74 E-value=34 Score=29.68 Aligned_cols=59 Identities=12% Similarity=0.083 Sum_probs=38.8
Q ss_pred cccEEEEecCCCCccCCcchHHHHHhC------CCC-cEEEecCCCCCCCcCCchhHHHHHHHHHHHh
Q 020067 266 HINATIVQGRYDVCCPMMSAWDLHKAW------PEA-DFKVVADAGHSANEPGIAAELVATNEKLKNL 326 (331)
Q Consensus 266 ~~P~l~i~G~~D~~~~~~~~~~~~~~~------~~~-~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 326 (331)
+.+++...|-.|..+|+.....-.+.+ ++- .+.++ .+||++..++ |+.....+..|+.-
T Consensus 425 ~Lkw~~~~g~~d~~~~~~~~~~t~e~~~~~~s~~n~~~~r~y-~aGHMvp~d~-P~~~~~~~~~~~~~ 490 (498)
T COG2939 425 KLKWLGASGYFDASTPFFWSRLTLEEMGGYKSYRNLTFLRIY-EAGHMVPYDR-PESSLEMVNLWING 490 (498)
T ss_pred cceEeeecchhhhcCCCcccccchhhcccccccCCceEEEEe-cCcceeecCC-hHHHHHHHHHHHhh
Confidence 456666666667766665443333332 223 34445 4999999997 99999999988764
No 278
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=51.72 E-value=33 Score=28.02 Aligned_cols=19 Identities=37% Similarity=0.328 Sum_probs=16.4
Q ss_pred EEEEeChhHHHHHHHHHhC
Q 020067 116 QVFGGSWGSTLALAYSLAH 134 (331)
Q Consensus 116 ~lvG~S~Gg~~a~~~a~~~ 134 (331)
.+.|.|+||.+|..++..+
T Consensus 35 ~i~GTStGgiIA~~la~g~ 53 (312)
T cd07212 35 WIAGTSTGGILALALLHGK 53 (312)
T ss_pred EEEeeChHHHHHHHHHcCC
Confidence 4789999999999999744
No 279
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=50.78 E-value=13 Score=27.26 Aligned_cols=57 Identities=19% Similarity=0.260 Sum_probs=36.2
Q ss_pred CCCcEEEeccCCCCCCC---CCcccccCCCCcEEEEecCCC--CCCCCCCCCCCccchHHHHHHHH
Q 020067 44 TGHPVVFLHGGPGGGTT---PSNRRFFDPDFYRIILFDQRG--AGKSTPHACLDQNTTWDLIDDIE 104 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~~---~~~~~~~~~~g~~vi~~D~~G--~G~s~~~~~~~~~~~~~~~~~~~ 104 (331)
.++.+|++-|.++++.. ..+...+.++|++++..|--. ||.+.. -.++-++-.+.+.
T Consensus 21 ~~~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LDGDnvR~gL~~d----LgFs~edR~eniR 82 (197)
T COG0529 21 QKGAVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLDGDNVRHGLNRD----LGFSREDRIENIR 82 (197)
T ss_pred CCCeEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEecChhHhhcccCC----CCCChHHHHHHHH
Confidence 56779999997766443 456666778999999999432 444422 2344555444443
No 280
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=47.65 E-value=35 Score=27.04 Aligned_cols=31 Identities=23% Similarity=0.017 Sum_probs=22.9
Q ss_pred HHHHhCCC-cEEEEEeChhHHHHHHHHHhCCC
Q 020067 106 LRQHLEIP-EWQVFGGSWGSTLALAYSLAHPD 136 (331)
Q Consensus 106 ~~~~~~~~-~v~lvG~S~Gg~~a~~~a~~~p~ 136 (331)
.+...+.. .=.++|.|.|+.++..++...+.
T Consensus 19 al~e~~~~~fd~i~GtSaGAi~a~~~~~g~~~ 50 (266)
T cd07208 19 AFLEAGIRPFDLVIGVSAGALNAASYLSGQRG 50 (266)
T ss_pred HHHHcCCCCCCEEEEECHHHHhHHHHHhCCcc
Confidence 33444555 44799999999999999887644
No 281
>PRK00103 rRNA large subunit methyltransferase; Provisional
Probab=46.70 E-value=73 Score=22.94 Aligned_cols=66 Identities=21% Similarity=0.242 Sum_probs=39.2
Q ss_pred CCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccc
Q 020067 70 DFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLL 149 (331)
Q Consensus 70 ~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~ 149 (331)
.+-.+|+.|-+|- ..+.+++++.+....+.-..+-++++|-+.|=.-.+.- +..-.+.+++...
T Consensus 66 ~~~~~i~LDe~Gk----------~~sS~~fA~~l~~~~~~g~~~i~F~IGGa~G~~~~v~~------~a~~~lSLS~mTf 129 (157)
T PRK00103 66 KGARVIALDERGK----------QLSSEEFAQELERWRDDGRSDVAFVIGGADGLSPAVKK------RADQSLSLSKLTL 129 (157)
T ss_pred CCCEEEEEcCCCC----------cCCHHHHHHHHHHHHhcCCccEEEEEcCccccCHHHHH------hcCceEEeccCCC
Confidence 3556999998873 45667788877766433222456788988884433322 2233455666554
Q ss_pred hh
Q 020067 150 RK 151 (331)
Q Consensus 150 ~~ 151 (331)
++
T Consensus 130 pH 131 (157)
T PRK00103 130 PH 131 (157)
T ss_pred cH
Confidence 43
No 282
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=46.67 E-value=42 Score=26.87 Aligned_cols=32 Identities=25% Similarity=0.192 Sum_probs=23.6
Q ss_pred HHHHHHHHhC-CCcEEEEEeChhHHHHHHHHHh
Q 020067 102 DIEKLRQHLE-IPEWQVFGGSWGSTLALAYSLA 133 (331)
Q Consensus 102 ~~~~~~~~~~-~~~v~lvG~S~Gg~~a~~~a~~ 133 (331)
....+++.+. .+++.++|+|-|+.+|-.+|..
T Consensus 80 ay~~l~~~~~~gd~I~lfGFSRGA~~AR~~a~~ 112 (277)
T PF09994_consen 80 AYRFLSKNYEPGDRIYLFGFSRGAYTARAFANM 112 (277)
T ss_pred HHHHHHhccCCcceEEEEecCccHHHHHHHHHH
Confidence 3344445553 3579999999999999988864
No 283
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=45.55 E-value=41 Score=26.08 Aligned_cols=31 Identities=19% Similarity=0.050 Sum_probs=22.8
Q ss_pred HHHHHhCCC--cEEEEEeChhHHHHHHHHHhCC
Q 020067 105 KLRQHLEIP--EWQVFGGSWGSTLALAYSLAHP 135 (331)
Q Consensus 105 ~~~~~~~~~--~v~lvG~S~Gg~~a~~~a~~~p 135 (331)
+.+...++. ...+.|-|.|+.++..++...+
T Consensus 19 ~~L~e~gi~~~~~~i~G~SAGAl~aa~~asg~~ 51 (233)
T cd07224 19 SLLIEAGVINETTPLAGASAGSLAAACSASGLS 51 (233)
T ss_pred HHHHHcCCCCCCCEEEEEcHHHHHHHHHHcCCC
Confidence 333344554 4479999999999999998753
No 284
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=45.03 E-value=23 Score=30.38 Aligned_cols=33 Identities=18% Similarity=0.113 Sum_probs=24.8
Q ss_pred HHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCc
Q 020067 105 KLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDK 137 (331)
Q Consensus 105 ~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~ 137 (331)
..+...++.+-++.|-|.|+.+|..++...++.
T Consensus 93 kaL~E~gl~p~vIsGTSaGAivAal~as~~~ee 125 (421)
T cd07230 93 KALFEANLLPRIISGSSAGSIVAAILCTHTDEE 125 (421)
T ss_pred HHHHHcCCCCCEEEEECHHHHHHHHHHcCCHHH
Confidence 334444666678999999999999999865544
No 285
>cd08769 DAP_dppA_2 Peptidase M55, D-aminopeptidase dipeptide-binding protein family. M55 Peptidase, D-Aminopeptidase dipeptide-binding protein (dppA; DAP dppA; EC 3.4.11.-) domain: Peptide transport systems are found in many bacterial species and generally function to accumulate intact peptides in the cell, where they are hydrolyzed. The dipeptide-binding protein (dppA) of Bacillus subtilis belongs to the dipeptide ABC transport (dpp) operon expressed early during sporulation. It is a binuclear zinc-dependent, D-specific aminopeptidase. The biologically active enzyme is a homodecamer with active sites buried in its channel. These self-compartmentalizing proteases are characterized by a SXDXEG motif. D-Ala-D-Ala and D-Ala-Gly-Gly are the preferred substrates. Bacillus subtilis dppA is thought to function as an adaptation to nutrient deficiency; hydrolysis of its substrate releases D-Ala which can be used subsequently as metabolic fuel. This family also contains a number of uncharacteriz
Probab=43.40 E-value=97 Score=24.74 Aligned_cols=55 Identities=9% Similarity=0.052 Sum_probs=35.4
Q ss_pred cccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCC-CCCCCcCCchhHHHHHHHHHHHh
Q 020067 266 HINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADA-GHSANEPGIAAELVATNEKLKNL 326 (331)
Q Consensus 266 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-gH~~~~~~~~~~~~~~i~~fl~~ 326 (331)
.+|+.++.|++ ...++..+.+|+++.+.++.+ |++--....|++..+.|.+=.++
T Consensus 147 gVPV~lVsGDd------~~~~ea~~~~P~~~tv~vK~~~gr~aA~~~~p~~a~~~I~~aa~~ 202 (270)
T cd08769 147 GVPVVLVAGDS------ELEKEVKEETPWAVFVPTKESLSRYSAKSPSMKKVKEELREAVKE 202 (270)
T ss_pred CCCEEEEecCH------HHHHHHHHhCCCceEEEEeeecCCCccccCCHHHHHHHHHHHHHH
Confidence 79999999986 234556666799998888643 64432222266666666655543
No 286
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=43.39 E-value=26 Score=29.52 Aligned_cols=36 Identities=11% Similarity=0.037 Sum_probs=26.5
Q ss_pred HHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCcee
Q 020067 104 EKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVT 139 (331)
Q Consensus 104 ~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~ 139 (331)
...+...++.+-++.|-|.|+.+|..+|...++.+.
T Consensus 102 ~kaL~e~gl~p~~i~GtS~Gaivaa~~a~~~~~e~~ 137 (391)
T cd07229 102 VKALWLRGLLPRIITGTATGALIAALVGVHTDEELL 137 (391)
T ss_pred HHHHHHcCCCCceEEEecHHHHHHHHHHcCCHHHHH
Confidence 334455577777899999999999999986554433
No 287
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=43.13 E-value=37 Score=27.71 Aligned_cols=22 Identities=32% Similarity=0.113 Sum_probs=19.1
Q ss_pred CCCcEEEEEeChhHHHHHHHHH
Q 020067 111 EIPEWQVFGGSWGSTLALAYSL 132 (331)
Q Consensus 111 ~~~~v~lvG~S~Gg~~a~~~a~ 132 (331)
+.++.++.|||+|=+.|+.++.
T Consensus 83 ~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 83 GVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred CCCCceeecccHhHHHHHHHcc
Confidence 5778899999999999988765
No 288
>PF03283 PAE: Pectinacetylesterase
Probab=42.77 E-value=81 Score=26.49 Aligned_cols=44 Identities=20% Similarity=0.136 Sum_probs=27.0
Q ss_pred HHHHHHH-hC-CCcEEEEEeChhHHHHHHHHH----hCCCceeeEEEecc
Q 020067 103 IEKLRQH-LE-IPEWQVFGGSWGSTLALAYSL----AHPDKVTGLVLRGI 146 (331)
Q Consensus 103 ~~~~~~~-~~-~~~v~lvG~S~Gg~~a~~~a~----~~p~~v~~li~~~~ 146 (331)
+..+++. ++ .++|+|.|.|.||.-++..+- ..|..++-..+.++
T Consensus 144 l~~l~~~gl~~a~~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v~~~~Ds 193 (361)
T PF03283_consen 144 LDDLLSNGLPNAKQVLLTGCSAGGLGAILHADYVRDRLPSSVKVKCLSDS 193 (361)
T ss_pred HHHHHHhcCcccceEEEeccChHHHHHHHHHHHHHHHhccCceEEEeccc
Confidence 3344444 32 358999999999988887654 34644444444444
No 289
>COG0218 Predicted GTPase [General function prediction only]
Probab=42.07 E-value=55 Score=24.60 Aligned_cols=61 Identities=13% Similarity=0.046 Sum_probs=34.7
Q ss_pred hccccccccEEEEecCCCCccCCcch---HHHHHhC---CCCc--EEEecCCCCCCCcCCchhHHHHHHHHHHHh
Q 020067 260 NIDNIRHINATIVQGRYDVCCPMMSA---WDLHKAW---PEAD--FKVVADAGHSANEPGIAAELVATNEKLKNL 326 (331)
Q Consensus 260 ~l~~i~~~P~l~i~G~~D~~~~~~~~---~~~~~~~---~~~~--~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 326 (331)
.+... ++|++++.-.-|.+-..+.. ..+++.+ +... ++.++-..... .+++.+.|..++..
T Consensus 130 ~l~~~-~i~~~vv~tK~DKi~~~~~~k~l~~v~~~l~~~~~~~~~~~~~ss~~k~G-----i~~l~~~i~~~~~~ 198 (200)
T COG0218 130 FLLEL-GIPVIVVLTKADKLKKSERNKQLNKVAEELKKPPPDDQWVVLFSSLKKKG-----IDELKAKILEWLKE 198 (200)
T ss_pred HHHHc-CCCeEEEEEccccCChhHHHHHHHHHHHHhcCCCCccceEEEEecccccC-----HHHHHHHHHHHhhc
Confidence 34445 69999999999999765443 3344333 2222 44444222221 45566666666643
No 290
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=42.05 E-value=1.2e+02 Score=21.96 Aligned_cols=48 Identities=15% Similarity=0.083 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHh--CCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEecc
Q 020067 99 LIDDIEKLRQHL--EIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGI 146 (331)
Q Consensus 99 ~~~~~~~~~~~~--~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~ 146 (331)
..+.+.++++.+ ..++|.++|-|..|..-+.++...++.+..++=.+|
T Consensus 53 ~~~~l~~~L~~~~~~gk~I~~yGA~~kg~tlln~~g~~~~~I~~vvD~np 102 (160)
T PF08484_consen 53 SKAELREFLEKLKAEGKRIAGYGAGAKGNTLLNYFGLDNDLIDYVVDDNP 102 (160)
T ss_dssp HHHHHHHHHHHHHHTT--EEEE---SHHHHHHHHHT--TTTS--EEES-G
T ss_pred HHHHHHHHHHHHHHcCCEEEEECcchHHHHHHHHhCCCcceeEEEEeCCh
Confidence 333444444443 346799999999999989888776777777765554
No 291
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=41.14 E-value=33 Score=29.58 Aligned_cols=38 Identities=16% Similarity=0.169 Sum_probs=22.9
Q ss_pred ccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCC
Q 020067 267 INATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSA 307 (331)
Q Consensus 267 ~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 307 (331)
.-|++++|+.|++........ .-.....++|+|++|+.
T Consensus 377 tnviFtNG~~DPW~~lgv~~~---~~~~~~~~~I~g~~Hc~ 414 (434)
T PF05577_consen 377 TNVIFTNGELDPWRALGVTSD---SSDSVPAIVIPGGAHCS 414 (434)
T ss_dssp -SEEEEEETT-CCGGGS--S----SSSSEEEEEETT--TTG
T ss_pred CeEEeeCCCCCCcccccCCCC---CCCCcccEEECCCeeec
Confidence 679999999999976542221 12344567899999986
No 292
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=40.65 E-value=32 Score=27.28 Aligned_cols=15 Identities=33% Similarity=0.614 Sum_probs=12.2
Q ss_pred CCCcEEEEEeChhHH
Q 020067 111 EIPEWQVFGGSWGST 125 (331)
Q Consensus 111 ~~~~v~lvG~S~Gg~ 125 (331)
....|+++|||+|..
T Consensus 233 ~i~~I~i~GhSl~~~ 247 (270)
T PF14253_consen 233 DIDEIIIYGHSLGEV 247 (270)
T ss_pred CCCEEEEEeCCCchh
Confidence 346899999999964
No 293
>KOG2872 consensus Uroporphyrinogen decarboxylase [Coenzyme transport and metabolism]
Probab=40.50 E-value=52 Score=26.28 Aligned_cols=70 Identities=10% Similarity=0.161 Sum_probs=43.8
Q ss_pred CcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCC--------CCCCCC-----CCCCCccchHHHHHHHHHHHHHhCC
Q 020067 46 HPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRG--------AGKSTP-----HACLDQNTTWDLIDDIEKLRQHLEI 112 (331)
Q Consensus 46 ~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G--------~G~s~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (331)
|-|+|..|.++ ....++..||.||..|+-- .|..-. .+..-.-+.+.+.+-+.+.++..|.
T Consensus 253 Pmi~fakG~g~------~Le~l~~tG~DVvgLDWTvdp~ear~~~g~~VtlQGNlDP~~ly~s~e~it~~v~~mv~~fG~ 326 (359)
T KOG2872|consen 253 PMILFAKGSGG------ALEELAQTGYDVVGLDWTVDPAEARRRVGNRVTLQGNLDPGVLYGSKEEITQLVKQMVKDFGK 326 (359)
T ss_pred ceEEEEcCcch------HHHHHHhcCCcEEeecccccHHHHHHhhCCceEEecCCChHHhcCCHHHHHHHHHHHHHHhCc
Confidence 56788887433 4566778999999999841 121110 0111123566778888899999996
Q ss_pred Cc-EEEEEeC
Q 020067 113 PE-WQVFGGS 121 (331)
Q Consensus 113 ~~-v~lvG~S 121 (331)
++ |.=+||.
T Consensus 327 ~ryI~NLGHG 336 (359)
T KOG2872|consen 327 SRYIANLGHG 336 (359)
T ss_pred cceEEecCCC
Confidence 65 3346774
No 294
>COG0482 TrmU Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain [Translation, ribosomal structure and biogenesis]
Probab=40.37 E-value=23 Score=29.31 Aligned_cols=62 Identities=16% Similarity=0.217 Sum_probs=38.6
Q ss_pred CCcEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCC
Q 020067 45 GHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIP 113 (331)
Q Consensus 45 ~~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (331)
..+|+.+.||-.|+.. +..+.++||.|+.+-+..+..... ...+..+-..|...+.+.+|+.
T Consensus 4 ~kV~v~mSGGVDSSVa---A~lLk~QGyeViGl~m~~~~~~~~----~~C~s~~d~~da~~va~~LGIp 65 (356)
T COG0482 4 KKVLVGMSGGVDSSVA---AYLLKEQGYEVIGLFMKNWDEDGG----GGCCSEEDLRDAERVADQLGIP 65 (356)
T ss_pred cEEEEEccCCHHHHHH---HHHHHHcCCeEEEEEEEeeccCCC----CcCCchhHHHHHHHHHHHhCCc
Confidence 4567888887666443 223446899999999887765111 1234445566666677776643
No 295
>TIGR00246 tRNA_RlmH_YbeA rRNA large subunit m3Psi methyltransferase RlmH. This protein, in the SPOUT methyltransferase family, previously designated YbeA in E. coli, was shown to be responsible for a further modification, a methylation, to a pseudouridine base in ribosomal large subunit RNA.
Probab=39.81 E-value=72 Score=22.85 Aligned_cols=63 Identities=19% Similarity=0.130 Sum_probs=38.2
Q ss_pred cEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccccchh
Q 020067 72 YRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRK 151 (331)
Q Consensus 72 ~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~ 151 (331)
-.||+.|-+|- ..+..++++.+..+.+. +.+-++++|-+.|=.-.+.- +....+.+++...++
T Consensus 66 ~~~i~LDe~Gk----------~~sS~~fA~~l~~~~~~-g~~i~FvIGGa~G~~~~v~~------~a~~~lSLS~mTfpH 128 (153)
T TIGR00246 66 AHVVTLDIPGK----------PWTTPQLADTLEKWKTD-GRDVTLLIGGPEGLSPTCKA------AAEQSWSLSKLTLPH 128 (153)
T ss_pred CeEEEEcCCCC----------cCCHHHHHHHHHHHhcc-CCeEEEEEcCCCcCCHHHHH------hcCceEEeecCCCcH
Confidence 46999998873 45667788877776433 32456688988885443322 223345566555443
No 296
>cd00382 beta_CA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=39.38 E-value=42 Score=22.75 Aligned_cols=31 Identities=16% Similarity=0.174 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEeChhHHHHH
Q 020067 98 DLIDDIEKLRQHLEIPEWQVFGGSWGSTLAL 128 (331)
Q Consensus 98 ~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~ 128 (331)
+....+...+..++.+.++++||+--|.+..
T Consensus 44 ~~~~sl~~av~~l~v~~ivV~gHt~CG~v~a 74 (119)
T cd00382 44 DVLASLEYAVEVLGVKHIIVCGHTDCGAVKA 74 (119)
T ss_pred cHHHHHHHHHHhhCCCEEEEEccCCCcHHHH
Confidence 4667777788999999999999976555443
No 297
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=39.37 E-value=1.4e+02 Score=22.46 Aligned_cols=66 Identities=23% Similarity=0.312 Sum_probs=42.3
Q ss_pred CCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhC--CCceeeEEEe
Q 020067 69 PDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAH--PDKVTGLVLR 144 (331)
Q Consensus 69 ~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~--p~~v~~li~~ 144 (331)
.+++.+|.+|-+|... .-.+..+.+..+++......+++|=-+..+.-.+..+..+ .-.+.++|+.
T Consensus 81 ~~~~D~vlIDT~Gr~~----------~d~~~~~el~~~~~~~~~~~~~LVlsa~~~~~~~~~~~~~~~~~~~~~lIlT 148 (196)
T PF00448_consen 81 KKGYDLVLIDTAGRSP----------RDEELLEELKKLLEALNPDEVHLVLSATMGQEDLEQALAFYEAFGIDGLILT 148 (196)
T ss_dssp HTTSSEEEEEE-SSSS----------THHHHHHHHHHHHHHHSSSEEEEEEEGGGGGHHHHHHHHHHHHSSTCEEEEE
T ss_pred hcCCCEEEEecCCcch----------hhHHHHHHHHHHhhhcCCccceEEEecccChHHHHHHHHHhhcccCceEEEE
Confidence 3689999999988532 2345677777778777766777665555555555444443 2246788864
No 298
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=39.04 E-value=30 Score=29.49 Aligned_cols=34 Identities=15% Similarity=0.082 Sum_probs=25.4
Q ss_pred HHHHhCCCcEEEEEeChhHHHHHHHHHhCCCcee
Q 020067 106 LRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVT 139 (331)
Q Consensus 106 ~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~ 139 (331)
.+...+..+-++.|-|.|+.+|..++...++.+.
T Consensus 88 aL~e~gllp~iI~GtSAGAivaalla~~t~~el~ 121 (407)
T cd07232 88 ALLDADLLPNVISGTSGGSLVAALLCTRTDEELK 121 (407)
T ss_pred HHHhCCCCCCEEEEECHHHHHHHHHHcCCHHHHH
Confidence 3344466677899999999999999986555443
No 299
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=38.28 E-value=34 Score=27.89 Aligned_cols=30 Identities=13% Similarity=0.064 Sum_probs=22.8
Q ss_pred HHHHhCCCcEEEEEeChhHHHHHHHHHhCC
Q 020067 106 LRQHLEIPEWQVFGGSWGSTLALAYSLAHP 135 (331)
Q Consensus 106 ~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p 135 (331)
.+...++.+-++.|-|.|+.+|..++...+
T Consensus 89 aL~e~gl~p~~i~GsSaGAivaa~~~~~t~ 118 (323)
T cd07231 89 TLVEHQLLPRVIAGSSVGSIVCAIIATRTD 118 (323)
T ss_pred HHHHcCCCCCEEEEECHHHHHHHHHHcCCH
Confidence 344447777789999999999999887543
No 300
>PF03610 EIIA-man: PTS system fructose IIA component; InterPro: IPR004701 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) [, ] is a major carbohydrate transport system in bacteria. The PTS catalyses the phosphorylation of incoming sugar substrates and coupled with translocation across the cell membrane, makes the PTS a link between the uptake and metabolism of sugars. The general mechanism of the PTS is the following: a phosphoryl group from phosphoenolpyruvate (PEP) is transferred via a signal transduction pathway, to enzyme I (EI) which in turn transfers it to a phosphoryl carrier, the histidine protein (HPr). Phospho-HPr then transfers the phosphoryl group to a sugar-specific permease, a membrane-bound complex known as enzyme 2 (EII), which transports the sugar to the cell. EII consists of at least three structurally distinct domains IIA, IIB and IIC []. These can either be fused together in a single polypeptide chain or exist as two or three interactive chains, formerly called enzymes II (EII) and III (EIII). The first domain (IIA or EIIA) carries the first permease-specific phosphorylation site, a histidine which is phosphorylated by phospho-HPr. The second domain (IIB or EIIB) is phosphorylated by phospho-IIA on a cysteinyl or histidyl residue, depending on the sugar transported. Finally, the phosphoryl group is transferred from the IIB domain to the sugar substrate concomitantly with the sugar uptake processed by the IIC domain. This third domain (IIC or EIIC) forms the translocation channel and the specific substrate-binding site. An additional transmembrane domain IID, homologous to IIC, can be found in some PTSs, e.g. for mannose [, , , ]. The Man family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of Escherichia coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for IIA and IIB components.; GO: 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane; PDB: 3GDW_B 2JZN_A 1VSQ_A 2JZO_B 1VRC_A 1PDO_A 3GX1_A 3B48_B 3BED_B 3IPR_C ....
Probab=38.26 E-value=16 Score=24.49 Aligned_cols=72 Identities=11% Similarity=0.048 Sum_probs=40.6
Q ss_pred EEEeccCCCCCCCCCcccccCCC-CcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhC-CCcEEEEEeChhHH
Q 020067 48 VVFLHGGPGGGTTPSNRRFFDPD-FYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLE-IPEWQVFGGSWGST 125 (331)
Q Consensus 48 vl~~HG~~~~~~~~~~~~~~~~~-g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~lvG~S~Gg~ 125 (331)
||..||... ......+..+... ...+.++++. ...+.+++.+.+.+.++.++ .+.+.++.==.||.
T Consensus 3 ii~sHG~~A-~g~~~~~~~i~G~~~~~i~~~~~~-----------~~~~~~~~~~~l~~~i~~~~~~~~vlil~Dl~ggs 70 (116)
T PF03610_consen 3 IIASHGSLA-EGLLESAEMILGEDQDNIEAVDLY-----------PDESIEDFEEKLEEAIEELDEGDGVLILTDLGGGS 70 (116)
T ss_dssp EEEEETTHH-HHHHHHHHHHHTSTCSSEEEEEET-----------TTSCHHHHHHHHHHHHHHCCTTSEEEEEESSTTSH
T ss_pred EEEECcHHH-HHHHHHHHHHcCCCcccEEEEECc-----------CCCCHHHHHHHHHHHHHhccCCCcEEEEeeCCCCc
Confidence 677788222 2222233333333 2345555543 23578889999999998886 45566665555554
Q ss_pred HHHHHH
Q 020067 126 LALAYS 131 (331)
Q Consensus 126 ~a~~~a 131 (331)
..-.++
T Consensus 71 p~n~a~ 76 (116)
T PF03610_consen 71 PFNEAA 76 (116)
T ss_dssp HHHHHH
T ss_pred cchHHH
Confidence 444443
No 301
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=38.13 E-value=1.6e+02 Score=21.56 Aligned_cols=53 Identities=9% Similarity=0.160 Sum_probs=38.3
Q ss_pred cCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCcEEEEEeChh
Q 020067 67 FDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWG 123 (331)
Q Consensus 67 ~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG~S~G 123 (331)
+.+.|++.+++|.=+.=-.... ..-..++.+.+.++.+..+.+++.|+--|.|
T Consensus 36 Lk~~Gik~li~DkDNTL~~~~~----~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaG 88 (168)
T PF09419_consen 36 LKKKGIKALIFDKDNTLTPPYE----DEIPPEYAEWLNELKKQFGKDRVLIVSNSAG 88 (168)
T ss_pred hhhcCceEEEEcCCCCCCCCCc----CcCCHHHHHHHHHHHHHCCCCeEEEEECCCC
Confidence 6689999999998765332221 2234467777777777777779999999986
No 302
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=37.95 E-value=64 Score=25.24 Aligned_cols=20 Identities=20% Similarity=0.208 Sum_probs=17.9
Q ss_pred EEEEeChhHHHHHHHHHhCC
Q 020067 116 QVFGGSWGSTLALAYSLAHP 135 (331)
Q Consensus 116 ~lvG~S~Gg~~a~~~a~~~p 135 (331)
.+.|-|.|+.++..++...+
T Consensus 34 ~i~GtSAGAl~aa~~a~g~~ 53 (243)
T cd07204 34 RIAGASAGAIVAAVVLCGVS 53 (243)
T ss_pred EEEEEcHHHHHHHHHHhCCC
Confidence 79999999999999998653
No 303
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=37.16 E-value=1.3e+02 Score=24.22 Aligned_cols=48 Identities=15% Similarity=0.194 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHhCCC---cEEEEEeChhHHHHHHHHHhCCCceeeEEEec
Q 020067 97 WDLIDDIEKLRQHLEIP---EWQVFGGSWGSTLALAYSLAHPDKVTGLVLRG 145 (331)
Q Consensus 97 ~~~~~~~~~~~~~~~~~---~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~ 145 (331)
+....-+..+++.++++ ++-=+|.++|++. ..+|.++..+|.|+.+..
T Consensus 55 eAQ~~k~~~~~~kl~L~~G~~lLDiGCGWG~l~-~~aA~~y~v~V~GvTlS~ 105 (283)
T COG2230 55 EAQRAKLDLILEKLGLKPGMTLLDIGCGWGGLA-IYAAEEYGVTVVGVTLSE 105 (283)
T ss_pred HHHHHHHHHHHHhcCCCCCCEEEEeCCChhHHH-HHHHHHcCCEEEEeeCCH
Confidence 45666777888888765 4556899999874 455666666677766543
No 304
>KOG2170 consensus ATPase of the AAA+ superfamily [General function prediction only]
Probab=36.85 E-value=24 Score=28.41 Aligned_cols=23 Identities=30% Similarity=0.378 Sum_probs=17.2
Q ss_pred EEeCCCCCCCcEEEeccCCCCCC
Q 020067 37 WEQSGNPTGHPVVFLHGGPGGGT 59 (331)
Q Consensus 37 ~~~~g~~~~~~vl~~HG~~~~~~ 59 (331)
|+..+.+.+|.+|=+||++|++.
T Consensus 101 ~~~n~~p~KPLvLSfHG~tGTGK 123 (344)
T KOG2170|consen 101 HWANPNPRKPLVLSFHGWTGTGK 123 (344)
T ss_pred HhcCCCCCCCeEEEecCCCCCch
Confidence 33445668899999999888754
No 305
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=36.84 E-value=99 Score=24.44 Aligned_cols=90 Identities=22% Similarity=0.120 Sum_probs=49.6
Q ss_pred CCCcEEEeccCCCCCCC-CCcccccCCCCcEEEEecCCCCCCCCCCCC--------CCccch--------HHHHHHHHHH
Q 020067 44 TGHPVVFLHGGPGGGTT-PSNRRFFDPDFYRIILFDQRGAGKSTPHAC--------LDQNTT--------WDLIDDIEKL 106 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~~-~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~--------~~~~~~--------~~~~~~~~~~ 106 (331)
.-|.+++.||+.+.... ......+...++.++..+...+|.+..... ...... ..+..+....
T Consensus 48 ~~p~v~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (299)
T COG1073 48 KLPAVVFLHGFGSSKEQSLGYAVLLAEKGYRVLAGDASLFGESGGDPRGLADSEGYAEDFSAAVLLLLSEGVLDKDYRLL 127 (299)
T ss_pred cCceEEeccCccccccCcchHHHHhhhceeEEeeeccccccccccccccccCccccccccchhheeeeccccccHHHHHH
Confidence 34679999997665443 335666767888888887533332221110 000000 0011111111
Q ss_pred HHHhCCCcEEEEEeChhHHHHHHHHHhCC
Q 020067 107 RQHLEIPEWQVFGGSWGSTLALAYSLAHP 135 (331)
Q Consensus 107 ~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p 135 (331)
.. ...+....|+++|+..+..++...+
T Consensus 128 ~~--~~~~~~~~g~~~~~~~~~~~~~~~~ 154 (299)
T COG1073 128 GA--SLGPRILAGLSLGGPSAGALLAWGP 154 (299)
T ss_pred hh--hcCcceEEEEEeeccchHHHhhcch
Confidence 11 1257888999999988888888776
No 306
>TIGR02883 spore_cwlD N-acetylmuramoyl-L-alanine amidase CwlD. Members of this protein family are the CwlD family of N-acetylmuramoyl-L-alanine amidase. This family has been called the germination-specific N-acetylmuramoyl-L-alanine amidase. CwlD is required, along with the putative deactylase PdaA, to make muramic delta-lactam, a novel peptidoglycan constituent found only in spores. CwlD mutants show a germination defect.
Probab=36.81 E-value=90 Score=23.24 Aligned_cols=38 Identities=21% Similarity=0.193 Sum_probs=20.7
Q ss_pred EEEecCCCCCCCCCCCCC-CccchH----HHHHHHHHHHHHhCC
Q 020067 74 IILFDQRGAGKSTPHACL-DQNTTW----DLIDDIEKLRQHLEI 112 (331)
Q Consensus 74 vi~~D~~G~G~s~~~~~~-~~~~~~----~~~~~~~~~~~~~~~ 112 (331)
+|++| ||||..++.... ....-. +++.-+...++..|.
T Consensus 2 ~I~iD-pGHGg~d~GA~~~~g~~E~~~~l~ia~~l~~~L~~~G~ 44 (189)
T TIGR02883 2 IIVID-PGHGGIDGGAVGKDGTLEKDITLEIALKLKDYLQEQGA 44 (189)
T ss_pred EEEEe-CCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHhCCC
Confidence 67788 899987744321 112222 344445555666554
No 307
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=36.27 E-value=71 Score=22.83 Aligned_cols=19 Identities=21% Similarity=-0.017 Sum_probs=16.6
Q ss_pred CcEEEEEeChhHHHHHHHH
Q 020067 113 PEWQVFGGSWGSTLALAYS 131 (331)
Q Consensus 113 ~~v~lvG~S~Gg~~a~~~a 131 (331)
..-.+.|.|.|+.++..++
T Consensus 28 ~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 28 CVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred CCCEEEEEcHHHHHHHHHh
Confidence 4567889999999999998
No 308
>PF15566 Imm18: Immunity protein 18
Probab=35.64 E-value=53 Score=18.37 Aligned_cols=30 Identities=20% Similarity=0.332 Sum_probs=24.3
Q ss_pred hHHHHHHHHHHHHHhCCCcEEEEEeChhHH
Q 020067 96 TWDLIDDIEKLRQHLEIPEWQVFGGSWGST 125 (331)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~ 125 (331)
++.+.+++..+......+.++++--||||.
T Consensus 4 L~~L~~~l~~L~~~~~~~H~Hlmtp~WgG~ 33 (52)
T PF15566_consen 4 LELLQDQLENLQEKEPFDHEHLMTPDWGGE 33 (52)
T ss_pred HHHHHHHHHHHHhccCCCCceecccccccc
Confidence 456777888888777777899999999986
No 309
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=35.42 E-value=19 Score=27.25 Aligned_cols=37 Identities=19% Similarity=0.257 Sum_probs=29.3
Q ss_pred CCCcEEEeccCCCCCCCCCcccccCCCCcEEEEecCC
Q 020067 44 TGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQR 80 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~ 80 (331)
+.+..|++-|....+.-..++..+.++||+|++.-.+
T Consensus 5 ~~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~ 41 (289)
T KOG1209|consen 5 SQPKKVLITGCSSGGIGYALAKEFARNGYLVYATARR 41 (289)
T ss_pred cCCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccc
Confidence 4667888888666666677888899999999998765
No 310
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=34.96 E-value=73 Score=24.98 Aligned_cols=20 Identities=25% Similarity=0.267 Sum_probs=17.4
Q ss_pred EEEEeChhHHHHHHHHHhCC
Q 020067 116 QVFGGSWGSTLALAYSLAHP 135 (331)
Q Consensus 116 ~lvG~S~Gg~~a~~~a~~~p 135 (331)
.+.|-|.|+.++..++...+
T Consensus 33 ~i~GtSAGAl~aa~~a~g~~ 52 (245)
T cd07218 33 KISGASAGALAACCLLCDLP 52 (245)
T ss_pred eEEEEcHHHHHHHHHHhCCc
Confidence 49999999999999998653
No 311
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=34.87 E-value=55 Score=26.52 Aligned_cols=30 Identities=13% Similarity=0.182 Sum_probs=22.7
Q ss_pred HhCCCcEEEEEeChhHHHHHHHHHhCCCce
Q 020067 109 HLEIPEWQVFGGSWGSTLALAYSLAHPDKV 138 (331)
Q Consensus 109 ~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v 138 (331)
..++.+-++.|.|.|+.+|..++....+.+
T Consensus 93 e~~l~~~~i~GtSaGAi~aa~~~~~~~~El 122 (298)
T cd07206 93 EQDLLPRVISGSSAGAIVAALLGTHTDEEL 122 (298)
T ss_pred HcCCCCCEEEEEcHHHHHHHHHHcCCcHHH
Confidence 345566689999999999999987654333
No 312
>COG4097 Predicted ferric reductase [Inorganic ion transport and metabolism]
Probab=34.35 E-value=1.5e+02 Score=25.05 Aligned_cols=54 Identities=15% Similarity=0.126 Sum_probs=41.9
Q ss_pred hHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCc--eeeEEEeccccc
Q 020067 96 TWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDK--VTGLVLRGIFLL 149 (331)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~--v~~li~~~~~~~ 149 (331)
...+++.+.++.+++..-.++++=-|--|.+...-..++|++ ...+..|+|...
T Consensus 357 ~~~y~~eLr~~~qkl~~~~lHiiDSs~~g~l~~e~ler~~~~~~~~sv~fCGP~~m 412 (438)
T COG4097 357 EALYAEELRALAQKLPNVVLHIIDSSKDGYLDQEDLERYPDRPRTRSVFFCGPIKM 412 (438)
T ss_pred hhHHHHHHHHHHhcCCCeEEEEecCCCCCccCHHHhhccccccCcceEEEEcCHHH
Confidence 345777888888888877889988888999999999988764 346667776544
No 313
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=33.89 E-value=2.1e+02 Score=24.75 Aligned_cols=65 Identities=17% Similarity=0.297 Sum_probs=50.7
Q ss_pred CCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCC--ceeeEEEe
Q 020067 70 DFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPD--KVTGLVLR 144 (331)
Q Consensus 70 ~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~--~v~~li~~ 144 (331)
.+|.|+.+|-.|.- .--+++.+.+.++-+.+....+.+|--+|=|.-|...|..+.+ .+.|+|+.
T Consensus 181 ~~~DvvIvDTAGRl----------~ide~Lm~El~~Ik~~~~P~E~llVvDam~GQdA~~~A~aF~e~l~itGvIlT 247 (451)
T COG0541 181 EGYDVVIVDTAGRL----------HIDEELMDELKEIKEVINPDETLLVVDAMIGQDAVNTAKAFNEALGITGVILT 247 (451)
T ss_pred cCCCEEEEeCCCcc----------cccHHHHHHHHHHHhhcCCCeEEEEEecccchHHHHHHHHHhhhcCCceEEEE
Confidence 56778888866531 1235678888888888888899999999999999999988765 37888876
No 314
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=33.47 E-value=1.2e+02 Score=25.95 Aligned_cols=62 Identities=11% Similarity=-0.070 Sum_probs=35.6
Q ss_pred cccEEEEecCCCCccCCcchHHHHHhC--CCCcEE--EecCCCCCCC--cCCchhHHHHHHHHHHHhhh
Q 020067 266 HINATIVQGRYDVCCPMMSAWDLHKAW--PEADFK--VVADAGHSAN--EPGIAAELVATNEKLKNLIK 328 (331)
Q Consensus 266 ~~P~l~i~G~~D~~~~~~~~~~~~~~~--~~~~~~--~~~~~gH~~~--~~~~~~~~~~~i~~fl~~~~ 328 (331)
..|++++.|.-|.+-+ +....+.+.+ .+.... .+||.|+... ..++.+.+.+.|.+|+..+.
T Consensus 189 p~P~VIv~gGlDs~qe-D~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~~D~~~l~~aVLd~L~~~p 256 (411)
T PF06500_consen 189 PYPTVIVCGGLDSLQE-DLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLTQDSSRLHQAVLDYLASRP 256 (411)
T ss_dssp -EEEEEEE--TTS-GG-GGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S-S-CCHHHHHHHHHHHHST
T ss_pred CCCEEEEeCCcchhHH-HHHHHHHHHHHhCCCEEEEEccCCCcccccCCCCcCHHHHHHHHHHHHhcCC
Confidence 4899999999998864 3333344444 244444 4588887642 22336788899999987653
No 315
>cd03379 beta_CA_cladeD Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=33.31 E-value=69 Score=22.53 Aligned_cols=28 Identities=18% Similarity=-0.039 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEeChhHH
Q 020067 98 DLIDDIEKLRQHLEIPEWQVFGGSWGST 125 (331)
Q Consensus 98 ~~~~~~~~~~~~~~~~~v~lvG~S~Gg~ 125 (331)
+....+...+..++.+.++++||+-=|.
T Consensus 41 ~~~~sl~~av~~l~~~~IiV~gHt~Cg~ 68 (142)
T cd03379 41 DAIRSLVVSVYLLGTREIIVIHHTDCGM 68 (142)
T ss_pred hHHHHHHHHHHHhCCCEEEEEeecCCcc
Confidence 4556677778899999999999974443
No 316
>cd00883 beta_CA_cladeA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=32.38 E-value=69 Score=23.73 Aligned_cols=32 Identities=13% Similarity=0.036 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHhCCCcEEEEEeChhHHHHHHH
Q 020067 99 LIDDIEKLRQHLEIPEWQVFGGSWGSTLALAY 130 (331)
Q Consensus 99 ~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~ 130 (331)
....++..+..++.+.|+++|||-=|.+...+
T Consensus 67 ~~asleyAv~~L~v~~IvV~GHs~CGav~a~~ 98 (182)
T cd00883 67 CLSVLQYAVDVLKVKHIIVCGHYGCGGVKAAL 98 (182)
T ss_pred hhhhHHHHHHhcCCCEEEEecCCCchHHHHHH
Confidence 45667777889999999999999766655544
No 317
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=32.31 E-value=2.7e+02 Score=23.19 Aligned_cols=38 Identities=24% Similarity=0.305 Sum_probs=22.2
Q ss_pred HHhCCCcEEEEEeChhHHHHHHH-HHhCCCceeeEEEec
Q 020067 108 QHLEIPEWQVFGGSWGSTLALAY-SLAHPDKVTGLVLRG 145 (331)
Q Consensus 108 ~~~~~~~v~lvG~S~Gg~~a~~~-a~~~p~~v~~li~~~ 145 (331)
..+-.+.=.++|-|.|+.++..+ .++.|+.-..+|.+-
T Consensus 298 r~La~eeGll~G~SSGan~~aAl~~a~~~en~~kliV~~ 336 (362)
T KOG1252|consen 298 RRLALEEGLLVGISSGANVAAALKLAKRPENAGKLIVVT 336 (362)
T ss_pred HHHHHhhCeeecccchHHHHHHHHHHhccccCCcEEEEE
Confidence 33444556899999999665433 233455444555443
No 318
>PLN03019 carbonic anhydrase
Probab=32.28 E-value=78 Score=26.00 Aligned_cols=33 Identities=21% Similarity=0.113 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHH
Q 020067 98 DLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAY 130 (331)
Q Consensus 98 ~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~ 130 (331)
.....|+..+..++.+.|+++|||-=|.+...+
T Consensus 200 ~v~aSIEYAV~~L~V~~IVV~GHs~CGaVkAal 232 (330)
T PLN03019 200 GVGAAIEYAVLHLKVENIVVIGHSACGGIKGLM 232 (330)
T ss_pred ccchhHHHHHHHhCCCEEEEecCCCchHHHHHH
Confidence 356678888899999999999999755554433
No 319
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=31.94 E-value=86 Score=24.70 Aligned_cols=22 Identities=23% Similarity=0.237 Sum_probs=18.3
Q ss_pred cEEEEEeChhHHHHHHHHHhCC
Q 020067 114 EWQVFGGSWGSTLALAYSLAHP 135 (331)
Q Consensus 114 ~v~lvG~S~Gg~~a~~~a~~~p 135 (331)
.-.+.|-|.|+.++..++...+
T Consensus 37 ~~~i~G~SAGAl~aa~~a~g~~ 58 (249)
T cd07220 37 ARKIYGASAGALTATALVTGVC 58 (249)
T ss_pred CCeEEEEcHHHHHHHHHHcCCC
Confidence 3568999999999999988653
No 320
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=31.87 E-value=91 Score=24.61 Aligned_cols=22 Identities=23% Similarity=0.376 Sum_probs=18.4
Q ss_pred cEEEEEeChhHHHHHHHHHhCC
Q 020067 114 EWQVFGGSWGSTLALAYSLAHP 135 (331)
Q Consensus 114 ~v~lvG~S~Gg~~a~~~a~~~p 135 (331)
.-.++|-|.|+.++..++...+
T Consensus 33 ~~~i~GtSAGAl~aa~~asg~~ 54 (252)
T cd07221 33 ARMFFGASAGALHCVTFLSGLP 54 (252)
T ss_pred CCEEEEEcHHHHHHHHHHhCCC
Confidence 3469999999999999987654
No 321
>PF00091 Tubulin: Tubulin/FtsZ family, GTPase domain; InterPro: IPR003008 This domain is found in all tubulin chains, as well as the bacterial FtsZ family of proteins. These proteins are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases, this entry is the GTPase domain. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea.; GO: 0051258 protein polymerization, 0043234 protein complex; PDB: 3E22_B 1SA1_D 3DU7_B 2P4N_B 3DCO_B 1Z2B_D 1SA0_B 2XRP_C 1TVK_B 2BTQ_B ....
Probab=31.69 E-value=1.5e+02 Score=22.56 Aligned_cols=48 Identities=15% Similarity=-0.004 Sum_probs=25.3
Q ss_pred HHHHHHHHHHhCCCcEEEEEeChhHHHHHHHH--------HhCCCceeeEEEeccc
Q 020067 100 IDDIEKLRQHLEIPEWQVFGGSWGSTLALAYS--------LAHPDKVTGLVLRGIF 147 (331)
Q Consensus 100 ~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a--------~~~p~~v~~li~~~~~ 147 (331)
.+.+...++..+.-..+++-||+||..+.-++ ..+|+.....+.+-|.
T Consensus 111 ~~~ir~~~e~~d~~~~~~i~~slgGGTGSG~~~~l~~~l~~~y~~~~~~~~~ilP~ 166 (216)
T PF00091_consen 111 LEQIRKEIEKCDSLDGFFIVHSLGGGTGSGLGPVLAEMLREEYPKKPIISFSILPF 166 (216)
T ss_dssp HHHHHHHHHTSTTESEEEEEEESSSSHHHHHHHHHHHHHHHTSTTSEEEEEEEE-C
T ss_pred ccccchhhccccccccceecccccceeccccccccchhhhccccccceeecccccc
Confidence 33344444444555678888888877543332 2356655444444443
No 322
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=31.58 E-value=1.2e+02 Score=25.91 Aligned_cols=72 Identities=17% Similarity=0.106 Sum_probs=40.1
Q ss_pred CCcEEEeccCCC----CCCCCCcccccCCCCcEEEEecCCCC---CCCCCCCCCCccchHHHHHHHHHHHHH--hCCCcE
Q 020067 45 GHPVVFLHGGPG----GGTTPSNRRFFDPDFYRIILFDQRGA---GKSTPHACLDQNTTWDLIDDIEKLRQH--LEIPEW 115 (331)
Q Consensus 45 ~~~vl~~HG~~~----~~~~~~~~~~~~~~g~~vi~~D~~G~---G~s~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v 115 (331)
+.|||+++.... +......+..+.+.|+.|+-++ +|. |...... -.+.++++..+...+.. +..+++
T Consensus 116 ~~pvvi~Pamn~~m~~~p~~~~Nl~~L~~~G~~ii~P~-~g~la~~~~g~gr---~~~~~~I~~~~~~~~~~~~l~gk~v 191 (399)
T PRK05579 116 TAPVLVAPAMNTQMWENPATQRNLATLRSRGVEIIGPA-SGRLACGDVGPGR---MAEPEEIVAAAERALSPKDLAGKRV 191 (399)
T ss_pred CCCEEEEeCCChhHcCCHHHHHHHHHHHHCCCEEECCC-CccccCCCcCCCC---CCCHHHHHHHHHHHhhhcccCCCEE
Confidence 356777775321 1122334555666899888665 343 3333222 34677777777766643 444567
Q ss_pred EEEEe
Q 020067 116 QVFGG 120 (331)
Q Consensus 116 ~lvG~ 120 (331)
.+.|-
T Consensus 192 lITgG 196 (399)
T PRK05579 192 LITAG 196 (399)
T ss_pred EEeCC
Confidence 77776
No 323
>PRK14974 cell division protein FtsY; Provisional
Probab=31.44 E-value=2.3e+02 Score=23.62 Aligned_cols=66 Identities=15% Similarity=0.216 Sum_probs=43.1
Q ss_pred CCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCC--CceeeEEEe
Q 020067 69 PDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHP--DKVTGLVLR 144 (331)
Q Consensus 69 ~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p--~~v~~li~~ 144 (331)
..++.++.+|-.|.... -..+.+.+..+.+......+++|.-+.-|.-++..+..+. -.+.++|+.
T Consensus 220 ~~~~DvVLIDTaGr~~~----------~~~lm~eL~~i~~~~~pd~~iLVl~a~~g~d~~~~a~~f~~~~~~~giIlT 287 (336)
T PRK14974 220 ARGIDVVLIDTAGRMHT----------DANLMDELKKIVRVTKPDLVIFVGDALAGNDAVEQAREFNEAVGIDGVILT 287 (336)
T ss_pred hCCCCEEEEECCCccCC----------cHHHHHHHHHHHHhhCCceEEEeeccccchhHHHHHHHHHhcCCCCEEEEe
Confidence 35788999998875432 2345566666666666667778877777766666565542 246777764
No 324
>PF03490 Varsurf_PPLC: Variant-surface-glycoprotein phospholipase C; InterPro: IPR003633 Variant-surface-glycoprotein phospholipase C, by hydrolysis of the attached glycolipid, releases soluble variant surface glycoprotein containing phosphoinositol from the cell wall after lysis. It catalyses the conversion of variant-surface-glycoprotein 1,2 didecanoyl-SN-phosphatidylinositol and water to 1,2-didecanoylglycerol and the soluble variant-surface-glycoprotein. It also cleaves similar membrane anchors on some mammalian proteins.; GO: 0047396 glycosylphosphatidylinositol diacylglycerol-lyase activity, 0006650 glycerophospholipid metabolic process
Probab=31.05 E-value=62 Score=17.77 Aligned_cols=27 Identities=11% Similarity=0.128 Sum_probs=23.1
Q ss_pred ccchHHHHHHHHHHHHHhCCCcEEEEE
Q 020067 93 QNTTWDLIDDIEKLRQHLEIPEWQVFG 119 (331)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~v~lvG 119 (331)
..+.+.+..|+...+..+.+..+.++|
T Consensus 5 ~w~PqSWM~DLrS~I~~~~I~ql~ipG 31 (51)
T PF03490_consen 5 AWHPQSWMSDLRSSIGEMAITQLFIPG 31 (51)
T ss_pred ccCcHHHHHHHHHHHhcceeeeEEecc
Confidence 346678999999999999988999888
No 325
>PRK04148 hypothetical protein; Provisional
Probab=30.37 E-value=1.8e+02 Score=20.32 Aligned_cols=30 Identities=10% Similarity=0.022 Sum_probs=21.4
Q ss_pred CcEEEEEeChhHHHHHHHHHhCCCceeeEEEecc
Q 020067 113 PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGI 146 (331)
Q Consensus 113 ~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~ 146 (331)
.++..+|...|..++..++... .-++.++-
T Consensus 18 ~kileIG~GfG~~vA~~L~~~G----~~ViaIDi 47 (134)
T PRK04148 18 KKIVELGIGFYFKVAKKLKESG----FDVIVIDI 47 (134)
T ss_pred CEEEEEEecCCHHHHHHHHHCC----CEEEEEEC
Confidence 5699999998888888877532 24566654
No 326
>PRK10319 N-acetylmuramoyl-l-alanine amidase I; Provisional
Probab=29.75 E-value=1.6e+02 Score=23.82 Aligned_cols=42 Identities=14% Similarity=0.229 Sum_probs=23.7
Q ss_pred CCcEEEEecCCCCCCCCCCCCC-CccchH----HHHHHHHHHHHHhCC
Q 020067 70 DFYRIILFDQRGAGKSTPHACL-DQNTTW----DLIDDIEKLRQHLEI 112 (331)
Q Consensus 70 ~g~~vi~~D~~G~G~s~~~~~~-~~~~~~----~~~~~~~~~~~~~~~ 112 (331)
.+-.+|++| ||||..++.... ....-. +++..+...++..|.
T Consensus 54 ~~~~~IvID-pGHGG~DpGAvg~~G~~EKdi~L~IA~~l~~~L~~~G~ 100 (287)
T PRK10319 54 GGKRVVMLD-PGHGGIDTGAIGRNGSKEKHVVLAIAKNVRSILRNHGI 100 (287)
T ss_pred CCCeEEEEE-CCCCCCCCCCcCCCCCcHHHHHHHHHHHHHHHHHHCCC
Confidence 456788999 799987644321 122222 344455555655543
No 327
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=29.67 E-value=2.1e+02 Score=24.78 Aligned_cols=65 Identities=17% Similarity=0.208 Sum_probs=43.1
Q ss_pred CCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCC--ceeeEEEe
Q 020067 70 DFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPD--KVTGLVLR 144 (331)
Q Consensus 70 ~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~--~v~~li~~ 144 (331)
.+|.+|.+|-+|.-.. -+.+.+.+..+.+......+++|--++-|.-+...+..+.+ .+.++|+.
T Consensus 181 ~~~DvViIDTaGr~~~----------d~~lm~El~~i~~~~~p~e~lLVlda~~Gq~a~~~a~~F~~~~~~~g~IlT 247 (429)
T TIGR01425 181 ENFDIIIVDTSGRHKQ----------EDSLFEEMLQVAEAIQPDNIIFVMDGSIGQAAEAQAKAFKDSVDVGSVIIT 247 (429)
T ss_pred CCCCEEEEECCCCCcc----------hHHHHHHHHHHhhhcCCcEEEEEeccccChhHHHHHHHHHhccCCcEEEEE
Confidence 4899999999984221 23455666666666666678888777777666666665532 46777765
No 328
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=29.56 E-value=1.2e+02 Score=20.46 Aligned_cols=32 Identities=19% Similarity=0.212 Sum_probs=24.7
Q ss_pred cEEEEE-eChhHHHHHHHHHhCCCceeeEEEecc
Q 020067 114 EWQVFG-GSWGSTLALAYSLAHPDKVTGLVLRGI 146 (331)
Q Consensus 114 ~v~lvG-~S~Gg~~a~~~a~~~p~~v~~li~~~~ 146 (331)
||.|+| ..+.|...+.+...+|+ ++-+.+.+.
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~-~e~~~~~~~ 33 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPD-FELVALVSS 33 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTST-EEEEEEEES
T ss_pred CEEEECCCCHHHHHHHHHHhcCCC-ccEEEeeee
Confidence 578999 99999999999999884 665555543
No 329
>COG1582 FlgEa Uncharacterized protein, possibly involved in motility [Cell motility and secretion]
Probab=29.14 E-value=1.2e+02 Score=17.81 Aligned_cols=36 Identities=11% Similarity=0.257 Sum_probs=26.1
Q ss_pred hCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhhh
Q 020067 291 AWPEADFKVVADAGHSANEPGIAAELVATNEKLKNLIK 328 (331)
Q Consensus 291 ~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~ 328 (331)
.+|+.++..+. +--+.-.+. .+++++.|.+|-+++-
T Consensus 24 ~~PDttItLin-GkkyvVkEs-veEVi~kI~~y~rkI~ 59 (67)
T COG1582 24 AFPDTTITLIN-GKKYVVKES-VEEVINKIIEYRRKIG 59 (67)
T ss_pred ccCCcEEEEEc-CcEEEEccc-HHHHHHHHHHHHHHhh
Confidence 45787777775 444555554 8999999999988763
No 330
>PF03681 UPF0150: Uncharacterised protein family (UPF0150); InterPro: IPR005357 This family of small proteins is uncharacterised. In Q9A3L8 from SWISSPROT this domain is found next to a DNA binding helix-turn-helix domain IPR002145 from INTERPRO, which suggests that this is some kind of ligand binding domain.; PDB: 2DSY_C 2YZT_A 3KWR_A.
Probab=29.09 E-value=90 Score=16.75 Aligned_cols=33 Identities=12% Similarity=0.093 Sum_probs=22.8
Q ss_pred CCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHH
Q 020067 69 PDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQ 108 (331)
Q Consensus 69 ~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~ 108 (331)
..+|.+..+|+||.-. ...+.++..+.+.+++.
T Consensus 11 ~~~y~~~~pdlpg~~t-------~G~t~eea~~~~~eal~ 43 (48)
T PF03681_consen 11 DGGYVAYFPDLPGCFT-------QGDTLEEALENAKEALE 43 (48)
T ss_dssp SSSEEEEETTCCTCEE-------EESSHHHHHHHHHHHHH
T ss_pred CCeEEEEeCCccChhh-------cCCCHHHHHHHHHHHHH
Confidence 4689999999998641 23466777666666554
No 331
>PF00484 Pro_CA: Carbonic anhydrase; InterPro: IPR001765 Carbonic anhydrases (4.2.1.1 from EC) (CA) are zinc metalloenzymes which catalyze the reversible hydration of carbon dioxide. In Escherichia coli, CA (gene cynT) is involved in recycling carbon dioxide formed in the bicarbonate-dependent decomposition of cyanate by cyanase (gene cynS). By this action, it prevents the depletion of cellular bicarbonate []. In photosynthetic bacteria and plant chloroplast, CA is essential to inorganic carbon fixation []. Prokaryotic and plant chloroplast CA are structurally and evolutionary related and form a family distinct from the one which groups the many different forms of eukaryotic CA's (see IPR001148 from INTERPRO). Hypothetical proteins yadF from Escherichia coli and HI1301 from Haemophilus influenzae also belong to this family. This family also includes, YbcF and related proteins, which are inactive homologues of bacterial carbonic anhydrase.; GO: 0004089 carbonate dehydratase activity, 0008270 zinc ion binding; PDB: 1DDZ_B 3LAS_A 2W3N_A 2W3Q_A 1G5C_F 3E2A_A 3E2X_B 2A8C_A 2A8D_D 3E3F_A ....
Probab=28.75 E-value=1.6e+02 Score=20.88 Aligned_cols=36 Identities=19% Similarity=0.144 Sum_probs=25.8
Q ss_pred hHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHH
Q 020067 96 TWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYS 131 (331)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a 131 (331)
..+....+...+..++.+.++++||+-=|.+...+.
T Consensus 38 ~~~~~~sle~av~~l~v~~IiV~gHt~CGa~~~~~~ 73 (153)
T PF00484_consen 38 DDSALASLEYAVYHLGVKEIIVCGHTDCGAIKAALD 73 (153)
T ss_dssp -HHHHHHHHHHHHTST-SEEEEEEETT-HHHHHHHH
T ss_pred ccchhhheeeeeecCCCCEEEEEcCCCchHHHHHHh
Confidence 346677777788999999999999998777664433
No 332
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=28.57 E-value=94 Score=24.38 Aligned_cols=18 Identities=28% Similarity=0.163 Sum_probs=16.0
Q ss_pred EEEEEeChhHHHHHHHHH
Q 020067 115 WQVFGGSWGSTLALAYSL 132 (331)
Q Consensus 115 v~lvG~S~Gg~~a~~~a~ 132 (331)
-.+.|-|.|+.++..++.
T Consensus 33 ~~i~GtSaGAl~aa~~a~ 50 (246)
T cd07222 33 KRFAGASAGSLVAAVLLT 50 (246)
T ss_pred CEEEEECHHHHHHHHHhc
Confidence 379999999999999984
No 333
>PLN03006 carbonate dehydratase
Probab=28.01 E-value=87 Score=25.40 Aligned_cols=30 Identities=17% Similarity=0.106 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHhCCCcEEEEEeChhHHHHH
Q 020067 99 LIDDIEKLRQHLEIPEWQVFGGSWGSTLAL 128 (331)
Q Consensus 99 ~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~ 128 (331)
....|+..+..++.+.|+++|||-=|.+..
T Consensus 158 ~~aSLEYAV~~L~V~~IVV~GHs~CGaV~A 187 (301)
T PLN03006 158 TKAALEFSVNTLNVENILVIGHSRCGGIQA 187 (301)
T ss_pred hhhhHHHHHHHhCCCEEEEecCCCchHHHH
Confidence 566778888999999999999997665553
No 334
>KOG3551 consensus Syntrophins (type beta) [Extracellular structures]
Probab=27.99 E-value=55 Score=27.27 Aligned_cols=38 Identities=18% Similarity=0.252 Sum_probs=27.6
Q ss_pred CCCccceeEeCCCceEEEEeCCCCC-----------CCcEEEeccCCCC
Q 020067 20 EPYSTGILKVSDIHTIYWEQSGNPT-----------GHPVVFLHGGPGG 57 (331)
Q Consensus 20 ~~~~~~~~~~~~g~~l~~~~~g~~~-----------~~~vl~~HG~~~~ 57 (331)
.+++.-....+||.++-|..+|.++ +|.|.++|.+.+.
T Consensus 449 ~pFEkLkmSsDDG~r~LyLDFGg~dGEiqLDLhscpKpiVFIlHsfLSA 497 (506)
T KOG3551|consen 449 HPFEKLKMSSDDGARMLYLDFGGPDGEIQLDLHSCPKPIVFILHSFLSA 497 (506)
T ss_pred ChHHHhccccCCCceEEEEecCCCCccEEeeeccCCCcEEEEehhhhhh
Confidence 3566667788899999999998543 3556777886543
No 335
>PLN03014 carbonic anhydrase
Probab=27.70 E-value=1.1e+02 Score=25.39 Aligned_cols=31 Identities=23% Similarity=0.122 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHhCCCcEEEEEeChhHHHHHH
Q 020067 99 LIDDIEKLRQHLEIPEWQVFGGSWGSTLALA 129 (331)
Q Consensus 99 ~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~ 129 (331)
....|+..+..++.+.|+++|||-=|.+...
T Consensus 206 v~asLEYAV~~L~V~~IVV~GHs~CGaV~Aa 236 (347)
T PLN03014 206 VGAAIEYAVLHLKVENIVVIGHSACGGIKGL 236 (347)
T ss_pred chhHHHHHHHHhCCCEEEEeCCCCchHHHHH
Confidence 5667788889999999999999965544443
No 336
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=27.58 E-value=1.3e+02 Score=24.59 Aligned_cols=34 Identities=21% Similarity=0.047 Sum_probs=25.0
Q ss_pred HHHHHHHHHHhCC----CcEEEEEeC--hhHHHHHHHHHh
Q 020067 100 IDDIEKLRQHLEI----PEWQVFGGS--WGSTLALAYSLA 133 (331)
Q Consensus 100 ~~~~~~~~~~~~~----~~v~lvG~S--~Gg~~a~~~a~~ 133 (331)
+..+.+++++.+. +++.++|.| ||-.++..+...
T Consensus 143 p~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~ 182 (301)
T PRK14194 143 PSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQA 182 (301)
T ss_pred HHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHC
Confidence 3445556666543 589999986 999999988765
No 337
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=27.48 E-value=57 Score=23.84 Aligned_cols=23 Identities=22% Similarity=-0.041 Sum_probs=17.5
Q ss_pred CCcEEEEEeChhHHHHHHHHHhC
Q 020067 112 IPEWQVFGGSWGSTLALAYSLAH 134 (331)
Q Consensus 112 ~~~v~lvG~S~Gg~~a~~~a~~~ 134 (331)
...-.+.|-|.||.+++.++...
T Consensus 26 ~~~d~i~GtS~Gal~a~~~~~~~ 48 (204)
T PF01734_consen 26 ERFDVISGTSAGALNAALLALGY 48 (204)
T ss_dssp CT-SEEEEECCHHHHHHHHHTC-
T ss_pred CCccEEEEcChhhhhHHHHHhCC
Confidence 34467899999999998888763
No 338
>PF12641 Flavodoxin_3: Flavodoxin domain
Probab=27.28 E-value=2.2e+02 Score=20.61 Aligned_cols=59 Identities=14% Similarity=0.097 Sum_probs=40.9
Q ss_pred cccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHH
Q 020067 266 HINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKN 325 (331)
Q Consensus 266 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~ 325 (331)
+.-++++..--|.-.+...++++.+.+.+.++.+|--+|.....+. ...+.+.+..++.
T Consensus 39 ~yD~i~lG~w~d~G~~d~~~~~fl~~l~~KkV~lF~T~G~~~~s~~-~~~~~~~~~~~~~ 97 (160)
T PF12641_consen 39 DYDLIFLGFWIDKGTPDKDMKEFLKKLKGKKVALFGTAGAGPDSEY-AKKILKNVEALLP 97 (160)
T ss_pred CCCEEEEEcCccCCCCCHHHHHHHHHccCCeEEEEEecCCCCchHH-HHHHHHHHHHhhc
Confidence 4667777777787777777788888887778888766666554443 5566666666654
No 339
>cd00884 beta_CA_cladeB Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=27.03 E-value=1e+02 Score=23.09 Aligned_cols=33 Identities=18% Similarity=0.036 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHH
Q 020067 98 DLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAY 130 (331)
Q Consensus 98 ~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~ 130 (331)
.....++..+..++.+.|+++|||-=|.+...+
T Consensus 72 ~~~asleyav~~l~v~~ivV~GH~~Cgav~Aa~ 104 (190)
T cd00884 72 GTSAAIEYAVAVLKVEHIVVCGHSDCGGIRALL 104 (190)
T ss_pred chhhhHHHHHHHhCCCEEEEeCCCcchHHHHHh
Confidence 356677778899999999999999766555444
No 340
>PF06289 FlbD: Flagellar protein (FlbD); InterPro: IPR009384 This family consists of several bacterial FlbD flagellar proteins. The exact function of this family is unknown [].
Probab=26.61 E-value=1e+02 Score=17.94 Aligned_cols=34 Identities=9% Similarity=0.157 Sum_probs=23.6
Q ss_pred CCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhh
Q 020067 292 WPEADFKVVADAGHSANEPGIAAELVATNEKLKNLI 327 (331)
Q Consensus 292 ~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 327 (331)
.|+ +.+.+-++.++.-.|. .+++.+.+.+|-+++
T Consensus 25 ~PD-TvItL~~G~k~vV~Es-~~eVi~ki~~y~~~i 58 (60)
T PF06289_consen 25 TPD-TVITLTNGKKYVVKES-VEEVIEKIIEYRRKI 58 (60)
T ss_pred cCC-eEEEEeCCCEEEEECC-HHHHHHHHHHHHHhc
Confidence 356 4444444555666665 999999999998775
No 341
>KOG4231 consensus Intracellular membrane-bound Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=26.54 E-value=93 Score=27.28 Aligned_cols=54 Identities=24% Similarity=0.175 Sum_probs=32.9
Q ss_pred CCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCcEE-----EEEeChhHHHHHHHHHhC
Q 020067 68 DPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQ-----VFGGSWGSTLALAYSLAH 134 (331)
Q Consensus 68 ~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-----lvG~S~Gg~~a~~~a~~~ 134 (331)
..+|.+++.+|--|. .. . ..-.+..-++.+..++|+ ++|.|.||.+|..+...+
T Consensus 413 kg~G~rILSiDGGGt--rG-------~----~~lqiL~kieklsgKpIheLFD~ICGvSTG~ilA~~Lg~k~ 471 (763)
T KOG4231|consen 413 KGQGLRILSIDGGGT--RG-------L----ATLQILKKIEKLSGKPIHELFDLICGVSTGGILAIALGVKL 471 (763)
T ss_pred CCCceEEEEecCCCc--cc-------h----hHHHHHHHHHHhcCCcHHHHHHHHhccCchHHHHHHHHhcC
Confidence 358999999995432 11 0 111222223444445543 789999999999997654
No 342
>PF13709 DUF4159: Domain of unknown function (DUF4159)
Probab=26.39 E-value=1.4e+02 Score=22.69 Aligned_cols=38 Identities=13% Similarity=0.037 Sum_probs=32.5
Q ss_pred cccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCC
Q 020067 266 HINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADA 303 (331)
Q Consensus 266 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (331)
+.|++.+.|..+...+.+..+.+.+.+.+.=++.++.+
T Consensus 53 ~yP~ly~~g~~~~~~s~~e~~~Lr~Yl~~GGfl~~D~~ 90 (207)
T PF13709_consen 53 FYPFLYWPGHGDFPLSDEEIANLRRYLENGGFLLFDDR 90 (207)
T ss_pred hCCEEEEeCCCCCCCCHHHHHHHHHHHHcCCEEEEECC
Confidence 68999999999997778888888888887888888766
No 343
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=26.34 E-value=64 Score=26.85 Aligned_cols=18 Identities=39% Similarity=0.324 Sum_probs=15.6
Q ss_pred EEEEeChhHHHHHHHHHh
Q 020067 116 QVFGGSWGSTLALAYSLA 133 (331)
Q Consensus 116 ~lvG~S~Gg~~a~~~a~~ 133 (331)
.+.|.|.||.+|..++..
T Consensus 44 lIaGTStGgIIAa~la~g 61 (344)
T cd07217 44 FVGGTSTGSIIAACIALG 61 (344)
T ss_pred EEEEecHHHHHHHHHHcC
Confidence 478999999999999853
No 344
>PRK10431 N-acetylmuramoyl-l-alanine amidase II; Provisional
Probab=25.86 E-value=2.1e+02 Score=24.94 Aligned_cols=37 Identities=22% Similarity=0.222 Sum_probs=21.2
Q ss_pred EEEEecCCCCCCCCCCCCC-CccchH----HHHHHHHHHHHHh
Q 020067 73 RIILFDQRGAGKSTPHACL-DQNTTW----DLIDDIEKLRQHL 110 (331)
Q Consensus 73 ~vi~~D~~G~G~s~~~~~~-~~~~~~----~~~~~~~~~~~~~ 110 (331)
-+|++| ||||..++.... ....-. +++..+.+.++..
T Consensus 192 ~vIvID-pGHGG~DpGA~g~~G~~EKdv~L~iA~~L~~~L~~~ 233 (445)
T PRK10431 192 VIIAID-AGHGGQDPGAIGPGGTREKNVTIAIARKLRTLLNDD 233 (445)
T ss_pred eEEEEe-CCCCCCCCCCcCCCCccHHHHHHHHHHHHHHHHHhC
Confidence 478899 899988754421 122222 3455555556554
No 345
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=25.66 E-value=2.2e+02 Score=24.30 Aligned_cols=72 Identities=15% Similarity=0.099 Sum_probs=39.1
Q ss_pred CcEEEeccCCCC----CCCCCcccccCCCCcEEEEecCCCC--CCCCCCCCCCccchHHHHHHHHHHHHH---hCCCcEE
Q 020067 46 HPVVFLHGGPGG----GTTPSNRRFFDPDFYRIILFDQRGA--GKSTPHACLDQNTTWDLIDDIEKLRQH---LEIPEWQ 116 (331)
Q Consensus 46 ~~vl~~HG~~~~----~~~~~~~~~~~~~g~~vi~~D~~G~--G~s~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~ 116 (331)
.++|+++..... ......+..+.+.|+.|+-+..--+ |..... ...+.+++.+.+...+.. +..+++.
T Consensus 113 ~plviaPamn~~m~~~p~~~~Nl~~L~~~G~~vv~P~~g~~ac~~~g~g---~~~~~~~i~~~v~~~~~~~~~~~~~~vl 189 (390)
T TIGR00521 113 APIILAPAMNENMYNNPAVQENIKRLKDDGYIFIEPDSGLLACGDEGKG---RLAEPETIVKAAEREFSPKEDLEGKRVL 189 (390)
T ss_pred CCEEEEeCCChhhcCCHHHHHHHHHHHHCCcEEECCCCcccccccccCC---CCCCHHHHHHHHHHHHhhccccCCceEE
Confidence 457777763211 1223344455567887766653222 333322 234677888877776643 4445677
Q ss_pred EEEe
Q 020067 117 VFGG 120 (331)
Q Consensus 117 lvG~ 120 (331)
+.|-
T Consensus 190 it~g 193 (390)
T TIGR00521 190 ITAG 193 (390)
T ss_pred EecC
Confidence 7666
No 346
>PLN00416 carbonate dehydratase
Probab=25.48 E-value=1.5e+02 Score=23.49 Aligned_cols=33 Identities=18% Similarity=0.130 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHH
Q 020067 98 DLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAY 130 (331)
Q Consensus 98 ~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~ 130 (331)
.....|+..+..++.+.|+++|||-=|.+...+
T Consensus 125 ~~~asLEyAv~~L~V~~IVV~GHs~CGaV~Aa~ 157 (258)
T PLN00416 125 GVGAAVEYAVVHLKVENILVIGHSCCGGIKGLM 157 (258)
T ss_pred cchhHHHHHHHHhCCCEEEEecCCCchHHHHHH
Confidence 355677778899999999999999666554443
No 347
>TIGR02683 upstrm_HI1419 probable addiction module killer protein. Members of this strictly bacterial protein family are small, at roughly 100 amino acids. The gene is almost invariably the upstream member of a gene pair, where the downstream member is a predicted DNA-binding protein from a clade within Pfam helix-turn-helix family pfam01381. These gene pairs, when found on the bacterial chromosome, often are located with prophage regions, but also in both integrated plasmid regions and near housekeeping genes. Analysis suggests that the gene pair may serve as an addiction module.
Probab=25.30 E-value=81 Score=20.25 Aligned_cols=25 Identities=24% Similarity=0.445 Sum_probs=15.2
Q ss_pred EeCCCceEEEEeCCCCCCCcEEEeccCC
Q 020067 28 KVSDIHTIYWEQSGNPTGHPVVFLHGGP 55 (331)
Q Consensus 28 ~~~~g~~l~~~~~g~~~~~~vl~~HG~~ 55 (331)
...++.++.|...+ +..+|++|||.
T Consensus 53 r~g~~yRiif~~~~---~~~vvll~gf~ 77 (95)
T TIGR02683 53 DFGPGYRVYFTQRG---KVIILLLCGGD 77 (95)
T ss_pred cCCCCEEEEEEEEC---CEEEEEEeCEe
Confidence 33335566665543 45688999864
No 348
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=25.18 E-value=91 Score=25.36 Aligned_cols=85 Identities=18% Similarity=0.131 Sum_probs=48.8
Q ss_pred cccccCCCCcEEEEecCCCCCCCCCCCCCC-ccchHHHHH--HHHHHHHHhCCCcE------EEEEeCh-----------
Q 020067 63 NRRFFDPDFYRIILFDQRGAGKSTPHACLD-QNTTWDLID--DIEKLRQHLEIPEW------QVFGGSW----------- 122 (331)
Q Consensus 63 ~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~v------~lvG~S~----------- 122 (331)
.+..+++.||.|+++|-...|......... ..-.-|+.+ -+.++++...++-| ..||.|+
T Consensus 16 tv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D~~~L~~vf~~~~idaViHFAa~~~VgESv~~Pl~Yy~NNv 95 (329)
T COG1087 16 TVRQLLKTGHEVVVLDNLSNGHKIALLKLQFKFYEGDLLDRALLTAVFEENKIDAVVHFAASISVGESVQNPLKYYDNNV 95 (329)
T ss_pred HHHHHHHCCCeEEEEecCCCCCHHHhhhccCceEEeccccHHHHHHHHHhcCCCEEEECccccccchhhhCHHHHHhhch
Confidence 445566799999999998777655332110 111112222 34555666555532 3577775
Q ss_pred hHHHHH-HHHHhCCCceeeEEEeccccc
Q 020067 123 GSTLAL-AYSLAHPDKVTGLVLRGIFLL 149 (331)
Q Consensus 123 Gg~~a~-~~a~~~p~~v~~li~~~~~~~ 149 (331)
+|.+.+ .++.++ .|+.+|+.++...
T Consensus 96 ~gTl~Ll~am~~~--gv~~~vFSStAav 121 (329)
T COG1087 96 VGTLNLIEAMLQT--GVKKFIFSSTAAV 121 (329)
T ss_pred HhHHHHHHHHHHh--CCCEEEEecchhh
Confidence 344444 444444 4999999887554
No 349
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=25.16 E-value=59 Score=26.49 Aligned_cols=52 Identities=23% Similarity=0.211 Sum_probs=30.8
Q ss_pred CCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCC---c-EEEEEeChhHHHHHHHHH
Q 020067 69 PDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIP---E-WQVFGGSWGSTLALAYSL 132 (331)
Q Consensus 69 ~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-v~lvG~S~Gg~~a~~~a~ 132 (331)
.++++|+++|-=|. - .. -.+.-+.++.+.++.. . =.++|-|.||.+|+.++.
T Consensus 5 ~~~~riLsLdGGGi--r-------G~---~~~~vL~~Le~~~~~~i~~~fDli~GTStGgiiA~~la~ 60 (308)
T cd07211 5 GRGIRILSIDGGGT--R-------GV---VALEILRKIEKLTGKPIHELFDYICGVSTGAILAFLLGL 60 (308)
T ss_pred CCCcEEEEECCChH--H-------HH---HHHHHHHHHHHHhCCCchhhcCEEEecChhHHHHHHHhc
Confidence 46889999984321 1 11 1233333344444422 1 237899999999999886
No 350
>cd03557 L-arabinose_isomerase L-Arabinose isomerase (AI) catalyzes the isomerization of L-arabinose to L-ribulose, the first reaction in its conversion into D-xylulose-5-phosphate, an intermediate in the pentose phosphate pathway, which allows L-arabinose to be used as a carbon source. AI can also convert D-galactose to D-tagatose at elevated temperatures in the presence of divalent metal ions. D-tagatose, rarely found in nature, is of commercial interest as a low-calorie sugar substitute.
Probab=24.97 E-value=4.9e+02 Score=23.13 Aligned_cols=56 Identities=9% Similarity=-0.038 Sum_probs=35.8
Q ss_pred ccchHHHHHHHHHHHHHhCC-----CcEEEEEeChhHHHHHHHHHhC--CCceeeEEEecccc
Q 020067 93 QNTTWDLIDDIEKLRQHLEI-----PEWQVFGGSWGSTLALAYSLAH--PDKVTGLVLRGIFL 148 (331)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~-----~~v~lvG~S~Gg~~a~~~a~~~--p~~v~~li~~~~~~ 148 (331)
..+.+.+.+....+.+.+.. -+|+..|.-.-.--+..+.... .+.+.++|+.-+..
T Consensus 15 ~~~l~~~~~~~~~i~~~l~~~~~~~~~v~~~~~v~~~~~i~~~~~~~~~~~~~dgvi~~m~TF 77 (484)
T cd03557 15 EEALKQVAAHSREIVDGLNASGKLPVKIVFKPVLTTPDEILAVCREANADDNCAGVITWMHTF 77 (484)
T ss_pred hHHHHHHHHHHHHHHHHhcccCCCCeEEEEccccCCHHHHHHHHHHccccCCccEEEEccCCC
Confidence 45677788888888888754 2566656555554444555443 25688988876543
No 351
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=24.75 E-value=70 Score=25.77 Aligned_cols=19 Identities=37% Similarity=0.368 Sum_probs=16.4
Q ss_pred EEEEeChhHHHHHHHHHhC
Q 020067 116 QVFGGSWGSTLALAYSLAH 134 (331)
Q Consensus 116 ~lvG~S~Gg~~a~~~a~~~ 134 (331)
.++|-|.||.+|+.++...
T Consensus 37 ~i~GTSaGaiia~~la~g~ 55 (288)
T cd07213 37 LFAGTSAGSLIALGLALGY 55 (288)
T ss_pred EEEEeCHHHHHHHHHHcCc
Confidence 5889999999999998653
No 352
>PF01520 Amidase_3: N-acetylmuramoyl-L-alanine amidase; InterPro: IPR002508 The cell wall envelope of Gram-positive bacteria is a macromolecular, exoskeletal organelle that is assembled and turned over at designated sites. The cell wall also functions as a surface organelle that allows Gram-positive pathogens to interact with their environment, in particular the tissues of the infected host. All of these functions require that surface proteins and enzymes be properly targeted to the cell wall envelope. Two basic mechanisms, cell wall sorting and targeting, have been identified. Cell well sorting is the covalent attachment of surface proteins to the peptidoglycan via a C-terminal sorting signal that contains a consensus LPXTG sequence. More than 100 proteins that possess cell wall-sorting signals, including the M proteins of Streptococcus pyogenes, protein A of Staphylococcus aureus, and several internalins of Listeria monocytogenes, have been identified. Cell wall targeting involves the noncovalent attachment of proteins to the cell surface via specialised binding domains. Several of these wall-binding domains appear to interact with secondary wall polymers that are associated with the peptidoglycan, for example teichoic acids and polysaccharides. Proteins that are targeted to the cell surface include muralytic enzymes such as autolysins, lysostaphin, and phage lytic enzymes. Other examples for targeted proteins are the surface S-layer proteins of bacilli and clostridia, as well as virulence factors required for the pathogenesis of L. monocytogenes (internalin B) and Streptococcus pneumoniae (PspA) infections []. Autolysin 3.5.1.28 from EC hydrolyses the link between N-acetylmuramoyl residues and L-amino acid residues in certain bacterial cell wall glycopeptides.; GO: 0008745 N-acetylmuramoyl-L-alanine amidase activity, 0009253 peptidoglycan catabolic process; PDB: 3QAY_A 3CZX_A 1JWQ_A 1XOV_A 3NE8_A.
Probab=24.70 E-value=84 Score=22.83 Aligned_cols=42 Identities=17% Similarity=0.119 Sum_probs=20.5
Q ss_pred EecCCCCCCCCCCCCC-CccchHH----HHHHHHHHHHHhCCCcEEEEE
Q 020067 76 LFDQRGAGKSTPHACL-DQNTTWD----LIDDIEKLRQHLEIPEWQVFG 119 (331)
Q Consensus 76 ~~D~~G~G~s~~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~v~lvG 119 (331)
++| ||||..++.... ....-.+ ++..+...++..+ -+|.+.-
T Consensus 2 ~id-pGHgg~d~Ga~~~~g~~E~~~~l~ia~~l~~~L~~~g-~~V~~tr 48 (175)
T PF01520_consen 2 VID-PGHGGNDPGAVGPNGIREKDINLDIALRLKKELEKHG-IKVYLTR 48 (175)
T ss_dssp EEE-EEEBTTBTSSBCTTSCBHHHHHHHHHHHHHHHHHHTT-EEEEESS
T ss_pred EEE-CCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHHHhcCC-cEEEEeC
Confidence 444 678776543322 2333444 4444455555656 3444443
No 353
>PRK07877 hypothetical protein; Provisional
Probab=24.67 E-value=1.7e+02 Score=27.41 Aligned_cols=40 Identities=20% Similarity=0.096 Sum_probs=30.0
Q ss_pred HHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEecccc
Q 020067 107 RQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFL 148 (331)
Q Consensus 107 ~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~ 148 (331)
.+.+...+|.|+|.+.|+.++..+|..- -+..+++++.-.
T Consensus 102 Q~~L~~~~V~IvG~GlGs~~a~~LaraG--vvG~l~lvD~D~ 141 (722)
T PRK07877 102 QERLGRLRIGVVGLSVGHAIAHTLAAEG--LCGELRLADFDT 141 (722)
T ss_pred HHHHhcCCEEEEEecHHHHHHHHHHHcc--CCCeEEEEcCCE
Confidence 4556667999999999999998888652 137788887643
No 354
>COG0288 CynT Carbonic anhydrase [Inorganic ion transport and metabolism]
Probab=24.58 E-value=88 Score=23.79 Aligned_cols=35 Identities=17% Similarity=0.102 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHH
Q 020067 97 WDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYS 131 (331)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a 131 (331)
.+....++-.+..++.+.|+++||+-=|++...+.
T Consensus 76 ~~~l~sleyAv~~L~v~~IiV~GH~~CGav~aa~~ 110 (207)
T COG0288 76 GSVLRSLEYAVYVLGVKEIIVCGHTDCGAVKAALD 110 (207)
T ss_pred cchhHHHHHHHHHcCCCEEEEecCCCcHHHHhccc
Confidence 46677788889999999999999987666655443
No 355
>cd00006 PTS_IIA_man PTS_IIA, PTS system, mannose/sorbose specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation. IIA subunits receive phosphoryl groups from HPr and transfer them to IIB subunits, which in turn phosphorylate the substrate.
Probab=24.58 E-value=1.3e+02 Score=20.42 Aligned_cols=70 Identities=13% Similarity=0.141 Sum_probs=41.2
Q ss_pred cEEEeccCCCCCCCCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCC-CcEEEEEeChhHH
Q 020067 47 PVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEI-PEWQVFGGSWGST 125 (331)
Q Consensus 47 ~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~lvG~S~Gg~ 125 (331)
.||..||-. .......+..+....-.+.++++. ...+.+++.+.+.++++.++. +.+.++-==+||.
T Consensus 3 ili~sHG~~-A~gi~~~~~~i~G~~~~i~~~~~~-----------~~~~~~~~~~~i~~~i~~~~~~~~viil~Dl~GGS 70 (122)
T cd00006 3 IIIATHGGF-ASGLLNSAEMILGEQENVEAIDFP-----------PGESPDDLLEKIKAALAELDSGEGVLILTDLFGGS 70 (122)
T ss_pred EEEEcCHHH-HHHHHHHHHHhcCCCCCeEEEEeC-----------CCCCHHHHHHHHHHHHHHhCCCCcEEEEEeCCCCC
Confidence 467888822 222333333343333466677664 234677888888888888864 4566655555665
Q ss_pred HHH
Q 020067 126 LAL 128 (331)
Q Consensus 126 ~a~ 128 (331)
...
T Consensus 71 p~n 73 (122)
T cd00006 71 PNN 73 (122)
T ss_pred HHH
Confidence 544
No 356
>KOG0780 consensus Signal recognition particle, subunit Srp54 [Intracellular trafficking, secretion, and vesicular transport]
Probab=24.18 E-value=2.7e+02 Score=23.82 Aligned_cols=58 Identities=17% Similarity=0.231 Sum_probs=31.2
Q ss_pred cCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhC
Q 020067 67 FDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAH 134 (331)
Q Consensus 67 ~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~ 134 (331)
+.+.+|.||.+|-.|.-.- -..+-+.+.++.+.+..+.+++|=-+.=|..+...|..+
T Consensus 179 fKke~fdvIIvDTSGRh~q----------e~sLfeEM~~v~~ai~Pd~vi~VmDasiGQaae~Qa~aF 236 (483)
T KOG0780|consen 179 FKKENFDVIIVDTSGRHKQ----------EASLFEEMKQVSKAIKPDEIIFVMDASIGQAAEAQARAF 236 (483)
T ss_pred HHhcCCcEEEEeCCCchhh----------hHHHHHHHHHHHhhcCCCeEEEEEeccccHhHHHHHHHH
Confidence 3347899999998764222 233444555555555555555444444444444444333
No 357
>PLN02154 carbonic anhydrase
Probab=23.49 E-value=1.3e+02 Score=24.22 Aligned_cols=32 Identities=19% Similarity=0.105 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHhCCCcEEEEEeChhHHHHHHH
Q 020067 99 LIDDIEKLRQHLEIPEWQVFGGSWGSTLALAY 130 (331)
Q Consensus 99 ~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~ 130 (331)
....++..+..++.+.|+++|||-=|.+...+
T Consensus 152 ~~aslEyAv~~L~v~~IvV~GHs~CGAV~Aal 183 (290)
T PLN02154 152 TNSALEFAVTTLQVENIIVMGHSNCGGIAALM 183 (290)
T ss_pred hhhHHHHHHHHhCCCEEEEecCCCchHHHHHH
Confidence 56677778899999999999999655544433
No 358
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=22.64 E-value=2e+02 Score=21.70 Aligned_cols=40 Identities=28% Similarity=0.313 Sum_probs=30.0
Q ss_pred HHHHHhCCCcEEEEEe-ChhHHHHHHHHHhCCCceeeEEEeccc
Q 020067 105 KLRQHLEIPEWQVFGG-SWGSTLALAYSLAHPDKVTGLVLRGIF 147 (331)
Q Consensus 105 ~~~~~~~~~~v~lvG~-S~Gg~~a~~~a~~~p~~v~~li~~~~~ 147 (331)
+..+.+...+|.++|- .+|+.++..++.. -+..+++++.-
T Consensus 14 ~~q~~L~~~~V~IvG~GglGs~ia~~La~~---Gvg~i~lvD~D 54 (200)
T TIGR02354 14 KIVQKLEQATVAICGLGGLGSNVAINLARA---GIGKLILVDFD 54 (200)
T ss_pred HHHHHHhCCcEEEECcCHHHHHHHHHHHHc---CCCEEEEECCC
Confidence 4456677788999985 5788888888765 37778888875
No 359
>TIGR03607 patatin-related protein. This bacterial protein family contains an N-terminal patatin domain, where patatins are plant storage proteins capable of phospholipase activity (see pfam01734). Regions of strong sequence conservation are separated by regions of significant sequence and length variability. Members of the family are distributed sporadically among bacteria. The function is unknown.
Probab=22.53 E-value=1.5e+02 Score=27.87 Aligned_cols=22 Identities=14% Similarity=0.063 Sum_probs=18.2
Q ss_pred CCCcEEEEEeChhHHHHHHHHH
Q 020067 111 EIPEWQVFGGSWGSTLALAYSL 132 (331)
Q Consensus 111 ~~~~v~lvG~S~Gg~~a~~~a~ 132 (331)
+..--++.|.|+||..+..+|.
T Consensus 64 ~~~~d~iaGTSAGAInaa~lA~ 85 (739)
T TIGR03607 64 RVRVDVISGTSAGGINGVLLAY 85 (739)
T ss_pred CCCCceEEeeCHHHHHHHHHHc
Confidence 4455678999999999998886
No 360
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=22.38 E-value=2.4e+02 Score=20.44 Aligned_cols=34 Identities=24% Similarity=0.062 Sum_probs=22.3
Q ss_pred HHHHHHHHHHhC----CCcEEEEEeC--hhHHHHHHHHHh
Q 020067 100 IDDIEKLRQHLE----IPEWQVFGGS--WGSTLALAYSLA 133 (331)
Q Consensus 100 ~~~~~~~~~~~~----~~~v~lvG~S--~Gg~~a~~~a~~ 133 (331)
+..+.+++++.+ .+++.++|.| .|--++..+..+
T Consensus 20 p~aii~lL~~~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~ 59 (160)
T PF02882_consen 20 PLAIIELLEYYGIDLEGKKVVVVGRSNIVGKPLAMLLLNK 59 (160)
T ss_dssp HHHHHHHHHHTT-STTT-EEEEE-TTTTTHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCCCCCCEEEEECCcCCCChHHHHHHHhC
Confidence 445556666654 3589999999 577777777665
No 361
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=22.19 E-value=1e+02 Score=25.65 Aligned_cols=19 Identities=32% Similarity=0.160 Sum_probs=15.3
Q ss_pred EEEEEeChhHHHHHHHHHh
Q 020067 115 WQVFGGSWGSTLALAYSLA 133 (331)
Q Consensus 115 v~lvG~S~Gg~~a~~~a~~ 133 (331)
-.++|||+|=+.|+.++..
T Consensus 126 ~~~~GHSlGE~aA~~~AG~ 144 (343)
T PLN02752 126 DVCAGLSLGEYTALVFAGA 144 (343)
T ss_pred CeeeeccHHHHHHHHHhCC
Confidence 3579999999988887743
No 362
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=22.09 E-value=2.5e+02 Score=23.23 Aligned_cols=64 Identities=20% Similarity=0.160 Sum_probs=38.3
Q ss_pred CCcEEEEecCCCCCCCCCCCC------CCc--------cchH-HHHHHHHHHHHHhC-CCcEEEEEeChhHHHHHHHHHh
Q 020067 70 DFYRIILFDQRGAGKSTPHAC------LDQ--------NTTW-DLIDDIEKLRQHLE-IPEWQVFGGSWGSTLALAYSLA 133 (331)
Q Consensus 70 ~g~~vi~~D~~G~G~s~~~~~------~~~--------~~~~-~~~~~~~~~~~~~~-~~~v~lvG~S~Gg~~a~~~a~~ 133 (331)
.+-+++++--+|.|.-.-... ... ..+. .+.+...-+++++. .++|+++|+|-|+.++--+|..
T Consensus 63 d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI~~AYrFL~~~yepGD~Iy~FGFSRGAf~aRVlagm 142 (423)
T COG3673 63 DGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNIREAYRFLIFNYEPGDEIYAFGFSRGAFSARVLAGM 142 (423)
T ss_pred CCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEeeccchhHHHHHHHHH
Confidence 678888888889886532110 000 0111 12222333445554 3589999999999999887764
No 363
>cd06896 PX_PI3K_C2_gamma The phosphoinositide binding Phox Homology Domain of the Gamma Isoform of Class II Phosphoinositide 3-Kinases. The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. The Phosphoinositide 3-Kinase (PI3K) family of enzymes catalyzes the phosphorylation of the 3-hydroxyl group of the inositol ring of phosphatidylinositol. PI3Ks play an important role in a variety of fundamental cellular processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, immune cell activation and apoptosis. PI3Ks are divided into three main classes (I, II, and III) based on their substrate specificity, regulation, and domain structure. Class II PI3Ks preferentially use PI as a substrate to produce PI3P, but can also phosphorylate PI4P to produce PI(3,4)P2. They function as monomers and do not associate with any regulatory subunits. Class II enzymes contain an N-terminal Ras binding domain, a lipid binding C2 dom
Probab=21.96 E-value=2.1e+02 Score=18.72 Aligned_cols=43 Identities=14% Similarity=0.134 Sum_probs=30.2
Q ss_pred HHHHhCCCCcEEEecCCCCCCCcCCchhHHHHHHHHHHHhhhcC
Q 020067 287 DLHKAWPEADFKVVADAGHSANEPGIAAELVATNEKLKNLIKNG 330 (331)
Q Consensus 287 ~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~~~ 330 (331)
++...+|...+-.+|+.-|...... ..+=.+.|..+++.+.++
T Consensus 42 ~L~~~FP~~~LP~fP~~~~~~~~~~-~~~R~~~L~~Yl~~Ll~~ 84 (101)
T cd06896 42 QLQKQFPSLALPEFPHWWHLPFTDS-DHKRVRDLNHYLEQLLSG 84 (101)
T ss_pred HHHHHCccccccCCCCccccCcccH-HHHHHHHHHHHHHHHHcc
Confidence 4455568778888888877766653 555677888888877654
No 364
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=21.84 E-value=1e+02 Score=33.80 Aligned_cols=28 Identities=25% Similarity=0.152 Sum_probs=23.4
Q ss_pred HHHHHHhCCCcEEEEEeChhHHHHHHHH
Q 020067 104 EKLRQHLEIPEWQVFGGSWGSTLALAYS 131 (331)
Q Consensus 104 ~~~~~~~~~~~v~lvG~S~Gg~~a~~~a 131 (331)
..+++.+|+++-.++|||+|=+.|+.++
T Consensus 665 ~~lL~~~Gi~Pd~v~GHSlGE~aAa~aA 692 (2582)
T TIGR02813 665 YKLFTQAGFKADMTAGHSFGELSALCAA 692 (2582)
T ss_pred HHHHHHcCCccceeecCCHHHHHHHHHh
Confidence 3456778999999999999999888875
No 365
>COG1246 ArgA N-acetylglutamate synthase and related acetyltransferases [Amino acid transport and metabolism]
Probab=21.42 E-value=1.5e+02 Score=21.21 Aligned_cols=40 Identities=23% Similarity=0.253 Sum_probs=28.6
Q ss_pred EEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCcEEEEEeChh
Q 020067 73 RIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWG 123 (331)
Q Consensus 73 ~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG~S~G 123 (331)
-+|-||++|.|... .+.+.+..-.+.+|+++++++--+..
T Consensus 71 laV~pd~r~~G~G~-----------~Ll~~~~~~Ar~~gi~~lf~LTt~~~ 110 (153)
T COG1246 71 LAVHPDYRGSGRGE-----------RLLERLLADARELGIKELFVLTTRSP 110 (153)
T ss_pred EEECHHhcCCCcHH-----------HHHHHHHHHHHHcCCceeeeeecccH
Confidence 35566788776543 56777777888999999998875333
No 366
>cd02696 MurNAc-LAA N-acetylmuramoyl-L-alanine amidase or MurNAc-LAA (also known as peptidoglycan aminohydrolase, NAMLA amidase, NAMLAA, Amidase 3, and peptidoglycan amidase; EC 3.5.1.28) is an autolysin that hydrolyzes the amide bond between N-acetylmuramoyl and L-amino acids in certain cell wall glycopeptides. These proteins are Zn-dependent peptidases with highly conserved residues involved in cation co-ordination. MurNAc-LAA in this family is one of several peptidoglycan hydrolases (PGHs) found in bacterial and bacteriophage or prophage genomes that are involved in the degradation of the peptidoglycan. In Escherichia coli, there are five MurNAc-LAAs present: AmiA, AmiB, AmiC and AmiD that are periplasmic, and AmpD that is cytoplasmic. Three of these (AmiA, AmiB and AmiC) belong to this family, the other two (AmiD and AmpD) do not. E. coli AmiA, AmiB and AmiC play an important role in cleaving the septum to release daughter cells after cell division. In general, bacterial MurNAc-LAAs
Probab=21.38 E-value=2e+02 Score=20.79 Aligned_cols=37 Identities=24% Similarity=0.272 Sum_probs=18.4
Q ss_pred EEecCCCCCCCCCCCCCC-ccchHH----HHHHHHHHHHHhCC
Q 020067 75 ILFDQRGAGKSTPHACLD-QNTTWD----LIDDIEKLRQHLEI 112 (331)
Q Consensus 75 i~~D~~G~G~s~~~~~~~-~~~~~~----~~~~~~~~~~~~~~ 112 (331)
|++| +|||..+...... ...-.+ ++..+...++..|.
T Consensus 2 v~ld-~GHg~~~~Ga~~~~g~~E~~~~~~ia~~l~~~L~~~G~ 43 (172)
T cd02696 2 IVID-PGHGGKDPGAVGNDGLKEKDINLAIALKLAKLLEAAGA 43 (172)
T ss_pred EEEe-CCCCCCCCCCcCCCCCchHHHHHHHHHHHHHHHHHCCC
Confidence 4455 7888876443222 233333 44444455555543
No 367
>TIGR03707 PPK2_P_aer polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by Pfam model pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1).
Probab=20.87 E-value=74 Score=24.66 Aligned_cols=69 Identities=17% Similarity=0.287 Sum_probs=43.6
Q ss_pred CCCcEEEeccCCCCCC---CCCcccccCCCCcEEEEecCCCCCCCCCCCCCCccchHHHHHH-HHHHHHHhC-CCcEEEE
Q 020067 44 TGHPVVFLHGGPGGGT---TPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDD-IEKLRQHLE-IPEWQVF 118 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~---~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~v~lv 118 (331)
+.|+||++.|+.+++. ...+...+..+|++|.++..|- .++...+ +-.+-..+. ...+.|+
T Consensus 29 ~~~vlIv~eG~DaAGKg~~I~~l~~~lDPRg~~v~~~~~pt--------------~eE~~~p~lwRfw~~lP~~G~i~IF 94 (230)
T TIGR03707 29 GARVVIVFEGRDAAGKGGTIKRITEHLNPRGARVVALPKPS--------------DRERTQWYFQRYVQHLPAAGEIVLF 94 (230)
T ss_pred CCCEEEEEeCCCCCCchHHHHHHHHhcCCCeeEEEeCCCCC--------------HHHHcChHHHHHHHhCCCCCeEEEE
Confidence 3588999999765533 4567777878999999987652 1222222 334445554 3477777
Q ss_pred EeChhHHH
Q 020067 119 GGSWGSTL 126 (331)
Q Consensus 119 G~S~Gg~~ 126 (331)
=-|+=+-+
T Consensus 95 ~rSwY~~~ 102 (230)
T TIGR03707 95 DRSWYNRA 102 (230)
T ss_pred eCchhhhH
Confidence 77765543
No 368
>PF05973 Gp49: Phage derived protein Gp49-like (DUF891); InterPro: IPR009241 This entry consists of several hypothetical viral and bacterial proteins some are annotated as addiction module killer proteins.
Probab=20.78 E-value=1.2e+02 Score=19.13 Aligned_cols=21 Identities=38% Similarity=0.509 Sum_probs=14.5
Q ss_pred CceEEEEeCCCCCCCcEEEeccCC
Q 020067 32 IHTIYWEQSGNPTGHPVVFLHGGP 55 (331)
Q Consensus 32 g~~l~~~~~g~~~~~~vl~~HG~~ 55 (331)
..++.|...+ +..||++||+.
T Consensus 52 ~~Ri~y~~~~---~~~ivll~~f~ 72 (91)
T PF05973_consen 52 IYRILYFFDG---GDIIVLLHGFI 72 (91)
T ss_pred cceEEEEEcC---ccEEEEEEEEE
Confidence 4567776654 34799999974
No 369
>cd00281 DAP_dppA Peptidase M55, D-aminopeptidase dipeptide-binding protein family. M55 Peptidase, D-Aminopeptidase dipeptide-binding protein (dppA; DAP dppA; EC 3.4.11.-) domain: Peptide transport systems are found in many bacterial species and generally function to accumulate intact peptides in the cell, where they are hydrolyzed. The dipeptide-binding protein (dppA) of Bacillus subtilis belongs to the dipeptide ABC transport (dpp) operon expressed early during sporulation. It is a binuclear zinc-dependent, D-specific aminopeptidase. The biologically active enzyme is a homodecamer with active sites buried in its channel. These self-compartmentalizing proteases are characterized by a SXDXEG motif. D-Ala-D-Ala and D-Ala-Gly-Gly are the preferred substrates. Bacillus subtilis dppA is thought to function as an adaptation to nutrient deficiency; hydrolysis of its substrate releases D-Ala which can be used subsequently as metabolic fuel. This family also contains a number of uncharacterized
Probab=20.64 E-value=3.2e+02 Score=21.90 Aligned_cols=54 Identities=7% Similarity=0.072 Sum_probs=34.5
Q ss_pred cccEEEEecCCCCccCCcchHHHHHhCCCCcEEEecCC-CCCCCcCCchhHHHHHHHHHHH
Q 020067 266 HINATIVQGRYDVCCPMMSAWDLHKAWPEADFKVVADA-GHSANEPGIAAELVATNEKLKN 325 (331)
Q Consensus 266 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-gH~~~~~~~~~~~~~~i~~fl~ 325 (331)
.+|++++.|++- . .++..+.+|+++.+.++.+ |++--....|.+..+.|.+=.+
T Consensus 146 gVPV~lvsGDd~-~-----~~ea~~~~P~~~tv~vK~~~gr~aa~~~~p~~a~~~I~~~a~ 200 (265)
T cd00281 146 GVPVVMVAGDAE-V-----CKEAKAYDAQVETVVTKKGMGRFSVKAPSPQKVLRAIREGTE 200 (265)
T ss_pred CCCEEEEecCHH-H-----HHHHHHhCCCceEEEEeeeeCCCccccCCHHHHHHHHHHHHH
Confidence 799999988643 2 2334555799998888643 6544332237777777766553
No 370
>PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=20.48 E-value=2.2e+02 Score=24.89 Aligned_cols=35 Identities=9% Similarity=0.159 Sum_probs=27.2
Q ss_pred HHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCC
Q 020067 101 DDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHP 135 (331)
Q Consensus 101 ~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p 135 (331)
.|..++.+.+..+++.++|....|..+..++....
T Consensus 3 ~~~~~~~~~~~~~~i~v~G~G~sG~a~a~~L~~~G 37 (458)
T PRK01710 3 RDFNEFKKFIKNKKVAVVGIGVSNIPLIKFLVKLG 37 (458)
T ss_pred chHHHHhhhhcCCeEEEEcccHHHHHHHHHHHHCC
Confidence 46667777777789999999999997766666543
No 371
>COG4667 Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=20.44 E-value=1.2e+02 Score=24.16 Aligned_cols=40 Identities=15% Similarity=0.168 Sum_probs=26.6
Q ss_pred HHHHHHHHhCCCcE-EEEEeChhHHHHHHHHHhCCCceeeEE
Q 020067 102 DIEKLRQHLEIPEW-QVFGGSWGSTLALAYSLAHPDKVTGLV 142 (331)
Q Consensus 102 ~~~~~~~~~~~~~v-~lvG~S~Gg~~a~~~a~~~p~~v~~li 142 (331)
.+.++++.-. .++ .++|.|+|+.-+..+.+..+.+-++++
T Consensus 29 VLD~fl~a~~-~~f~~~~GvSAGA~n~~aYls~Q~gra~~~~ 69 (292)
T COG4667 29 VLDEFLRANF-NPFDLVVGVSAGALNLVAYLSKQRGRARRVI 69 (292)
T ss_pred HHHHHHHhcc-CCcCeeeeecHhHHhHHHHhhcCCchHHHHH
Confidence 3444443322 233 478999999999999888877655544
No 372
>PF11009 DUF2847: Protein of unknown function (DUF2847); InterPro: IPR022551 Members of this protein family, including YtxJ from Bacillus subtilis, occur in species that encode proteins for synthesizing bacillithiol. The protein is described as thioredoxin-like, while another bacillithiol-associated protein, YpdA (TIGR04018 from TIGRFAMS), is described as thioredoxin reductase-like. ; PDB: 3IV4_A.
Probab=20.39 E-value=2.7e+02 Score=18.48 Aligned_cols=35 Identities=9% Similarity=0.033 Sum_probs=23.4
Q ss_pred HHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhC
Q 020067 100 IDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAH 134 (331)
Q Consensus 100 ~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~ 134 (331)
.+++.++++.-..+++.|+=||.-|.+...+..++
T Consensus 7 ~eql~~i~~~S~~~~~~iFKHSt~C~IS~~a~~~~ 41 (105)
T PF11009_consen 7 EEQLEEILEESKEKPVLIFKHSTRCPISAMALREF 41 (105)
T ss_dssp HHHHHHHHHH---SEEEEEEE-TT-HHHHHHHHHH
T ss_pred HHHHHHHHHhcccCcEEEEEeCCCChhhHHHHHHH
Confidence 45667777776667999999999999988876543
No 373
>KOG2728 consensus Uncharacterized conserved protein with similarity to phosphopantothenoylcysteine synthetase/decarboxylase [General function prediction only]
Probab=20.31 E-value=1.1e+02 Score=23.90 Aligned_cols=47 Identities=19% Similarity=0.313 Sum_probs=31.7
Q ss_pred eEEEEeCCCC----CCCcEEEeccCCCCCCCCCcccccCCCCcEEEEecCC
Q 020067 34 TIYWEQSGNP----TGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQR 80 (331)
Q Consensus 34 ~l~~~~~g~~----~~~~vl~~HG~~~~~~~~~~~~~~~~~g~~vi~~D~~ 80 (331)
+|...+.|.. ...+|=|+--++.+..-..-++++++.||.||-.-..
T Consensus 32 rIVlVTSGGTtVPLE~ntVRFiDNFSaGtRGAaSAE~Fl~agYaVIFl~R~ 82 (302)
T KOG2728|consen 32 RIVLVTSGGTTVPLEQNTVRFIDNFSAGTRGAASAEYFLAAGYAVIFLYRE 82 (302)
T ss_pred eEEEEecCCeEeecccCceEeeeccCcCCccchhHHHHHhCCceEEEEeec
Confidence 4555555532 2346888888766656566778888999999877644
No 374
>TIGR00959 ffh signal recognition particle protein. This model represents Ffh (Fifty-Four Homolog), the protein component that forms the bacterial (and organellar) signal recognition particle together with a 4.5S RNA. Ffh is a GTPase homologous to eukaryotic SRP54 and also to the GTPase FtsY (TIGR00064) that is the receptor for the signal recognition particle.
Probab=20.31 E-value=5.2e+02 Score=22.53 Aligned_cols=66 Identities=15% Similarity=0.262 Sum_probs=39.0
Q ss_pred CCCcEEEEecCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCC--ceeeEEEe
Q 020067 69 PDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPD--KVTGLVLR 144 (331)
Q Consensus 69 ~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~--~v~~li~~ 144 (331)
..+|.++.+|-+|....+ +.+.+.+..+.+.+....+++|--++-|.-+...|..+-+ .+.++|+.
T Consensus 180 ~~~~DvVIIDTaGr~~~d----------~~l~~eL~~i~~~~~p~e~lLVvda~tgq~~~~~a~~f~~~v~i~giIlT 247 (428)
T TIGR00959 180 ENGFDVVIVDTAGRLQID----------EELMEELAAIKEILNPDEILLVVDAMTGQDAVNTAKTFNERLGLTGVVLT 247 (428)
T ss_pred hcCCCEEEEeCCCccccC----------HHHHHHHHHHHHhhCCceEEEEEeccchHHHHHHHHHHHhhCCCCEEEEe
Confidence 467899999988864321 2345555555555555566666555555555555554422 46677755
No 375
>cd03378 beta_CA_cladeC Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=20.25 E-value=1.9e+02 Score=20.82 Aligned_cols=30 Identities=20% Similarity=0.252 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHhCCCcEEEEEeChhHHHHH
Q 020067 99 LIDDIEKLRQHLEIPEWQVFGGSWGSTLAL 128 (331)
Q Consensus 99 ~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~ 128 (331)
....++..+..++.+.++++|||-=|.+..
T Consensus 78 ~~~sl~yav~~l~v~~IvV~GHt~CG~~~a 107 (154)
T cd03378 78 VLGSLEYAVEVLGVPLVVVLGHESCGAVAA 107 (154)
T ss_pred HHHHHHHHHHHhCCCEEEEEcCCCccHHHH
Confidence 466677778899999999999998554443
No 376
>cd01014 nicotinamidase_related Nicotinamidase_ related amidohydrolases. Cysteine hydrolases of unknown function that share the catalytic triad with other amidohydrolases, like nicotinamidase, which converts nicotinamide to nicotinic acid and ammonia.
Probab=20.24 E-value=2.2e+02 Score=20.26 Aligned_cols=46 Identities=13% Similarity=0.031 Sum_probs=29.4
Q ss_pred HHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCCCceeeEEEeccc
Q 020067 102 DIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIF 147 (331)
Q Consensus 102 ~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~li~~~~~ 147 (331)
++.+.++..+.+.++++|-+....+...+.......++-.|+.+..
T Consensus 89 ~l~~~L~~~gi~~viv~G~~td~CV~~Ta~~a~~~g~~v~vi~Da~ 134 (155)
T cd01014 89 DLEEWLREAGIDHLVICGAMTEMCVDTTVRSAFDLGYDVTVVADAC 134 (155)
T ss_pred CHHHHHHHCCCCEEEEEeeccchhHHHHHHHHHHCCCcEEEecccc
Confidence 5667778889999999999986554443333322235555555543
No 377
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=20.12 E-value=74 Score=25.28 Aligned_cols=37 Identities=11% Similarity=0.107 Sum_probs=28.1
Q ss_pred CCCcEEEeccCCCCCC---CCCcccccCCCCcEEEEecCC
Q 020067 44 TGHPVVFLHGGPGGGT---TPSNRRFFDPDFYRIILFDQR 80 (331)
Q Consensus 44 ~~~~vl~~HG~~~~~~---~~~~~~~~~~~g~~vi~~D~~ 80 (331)
..|+||++.|+.+++. ...+...+..+|++|.++..|
T Consensus 54 ~~~vlIv~eG~DaAGKG~~I~~l~~~lDPRg~~V~s~~~P 93 (264)
T TIGR03709 54 RRSLLLVLQAMDAAGKDGTIRHVMSGVNPQGCQVTSFKAP 93 (264)
T ss_pred CCcEEEEEECCCCCCchHHHHHHHHhcCCCeeEEEeCCCC
Confidence 4588999999765533 466777787899999999654
No 378
>PRK15219 carbonic anhydrase; Provisional
Probab=20.03 E-value=1.6e+02 Score=23.23 Aligned_cols=32 Identities=16% Similarity=0.012 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHhCCCcEEEEEeChhHHHHHHH
Q 020067 99 LIDDIEKLRQHLEIPEWQVFGGSWGSTLALAY 130 (331)
Q Consensus 99 ~~~~~~~~~~~~~~~~v~lvG~S~Gg~~a~~~ 130 (331)
....++..+..++.+.|+++|||-=|.+...+
T Consensus 129 ~~~slEyAv~~L~v~~IvVlGHt~CGav~Aa~ 160 (245)
T PRK15219 129 LLGSMEFACAVAGAKVVLVMGHTACGAVKGAI 160 (245)
T ss_pred hhhHHHHHHHHcCCCEEEEecCCcchHHHHHH
Confidence 45577888899999999999999766555443
No 379
>COG2240 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism]
Probab=20.02 E-value=4.8e+02 Score=21.13 Aligned_cols=81 Identities=15% Similarity=0.032 Sum_probs=38.3
Q ss_pred CCCCcEEEEe------cCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCcEEEEEeChhHH----HHHHHHHhCCCc
Q 020067 68 DPDFYRIILF------DQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGST----LALAYSLAHPDK 137 (331)
Q Consensus 68 ~~~g~~vi~~------D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG~S~Gg~----~a~~~a~~~p~~ 137 (331)
...|++|+++ +++|||...+... ....+.++.+++.+ ++.++.=..++-|+=-.+. ++-...+-....
T Consensus 25 q~~G~~V~~vpTV~fSnHtgyg~~~g~v~-~~e~l~~~l~~l~~-~~~~~~~davltGYlgs~~qv~~i~~~v~~vk~~~ 102 (281)
T COG2240 25 QRLGLDVWAVPTVQFSNHTGYGKWTGIVM-PPEQLADLLNGLEA-IDKLGECDAVLTGYLGSAEQVRAIAGIVKAVKEAN 102 (281)
T ss_pred HHcCCceeeeceEEecCCCCCCCCCCcCC-CHHHHHHHHHHHHh-cccccccCEEEEccCCCHHHHHHHHHHHHHHhccC
Confidence 3456665554 6899998764431 11223333333322 0122222466767533222 222222222234
Q ss_pred eeeEEEeccccch
Q 020067 138 VTGLVLRGIFLLR 150 (331)
Q Consensus 138 v~~li~~~~~~~~ 150 (331)
.+.+++++|....
T Consensus 103 P~~~~l~DPVMGD 115 (281)
T COG2240 103 PNALYLCDPVMGD 115 (281)
T ss_pred CCeEEEeCCcccC
Confidence 5578999986643
Done!