Query 020071
Match_columns 331
No_of_seqs 258 out of 2826
Neff 10.0
Searched_HMMs 13730
Date Mon Mar 25 11:20:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020071.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/020071hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1sxjb2 c.37.1.20 (B:7-230) Re 100.0 1.3E-43 9.5E-48 297.1 21.2 222 11-232 1-222 (224)
2 d1sxjc2 c.37.1.20 (C:12-238) R 100.0 1.7E-40 1.2E-44 278.7 22.5 221 12-233 1-226 (227)
3 d1njfa_ c.37.1.20 (A:) delta p 100.0 3.7E-40 2.7E-44 278.3 24.2 216 15-233 2-238 (239)
4 d1iqpa2 c.37.1.20 (A:2-232) Re 100.0 7.5E-40 5.4E-44 275.4 18.7 224 7-231 6-229 (231)
5 d1sxjd2 c.37.1.20 (D:26-262) R 100.0 5.2E-37 3.8E-41 258.9 20.0 220 14-233 1-236 (237)
6 d1sxje2 c.37.1.20 (E:4-255) Re 100.0 1E-32 7.4E-37 234.5 21.0 204 15-218 1-239 (252)
7 d1a5ta2 c.37.1.20 (A:1-207) de 100.0 9.6E-32 7E-36 220.8 19.7 178 29-214 6-206 (207)
8 d1sxja2 c.37.1.20 (A:295-547) 100.0 3.6E-31 2.6E-35 225.0 20.4 212 14-230 3-244 (253)
9 d1in4a2 c.37.1.20 (A:17-254) H 100.0 1.5E-28 1.1E-32 206.8 25.0 198 19-230 3-229 (238)
10 d1ixsb2 c.37.1.20 (B:4-242) Ho 100.0 8.8E-28 6.4E-32 202.1 25.2 199 19-230 3-230 (239)
11 d2gnoa2 c.37.1.20 (A:11-208) g 99.9 8.8E-26 6.4E-30 183.0 15.8 137 33-172 2-140 (198)
12 d1ixza_ c.37.1.20 (A:) AAA dom 99.9 3.3E-21 2.4E-25 161.2 16.2 198 22-232 6-246 (247)
13 d1lv7a_ c.37.1.20 (A:) AAA dom 99.9 1.2E-20 8.8E-25 158.4 19.5 197 21-230 8-247 (256)
14 d1fnna2 c.37.1.20 (A:1-276) CD 99.8 3.8E-18 2.8E-22 145.1 25.0 211 12-231 6-269 (276)
15 d1e32a2 c.37.1.20 (A:201-458) 99.8 4.1E-18 3E-22 143.6 16.2 179 23-214 2-216 (258)
16 d1w5sa2 c.37.1.20 (A:7-293) CD 99.7 4.2E-17 3.1E-21 139.3 19.3 212 13-232 7-284 (287)
17 d1r6bx2 c.37.1.20 (X:169-436) 99.7 1.2E-16 8.5E-21 133.7 19.2 201 12-217 5-238 (268)
18 d1l8qa2 c.37.1.20 (A:77-289) C 99.7 8.2E-17 6E-21 131.3 16.6 183 23-216 8-210 (213)
19 d1r7ra3 c.37.1.20 (A:471-735) 99.7 3.4E-18 2.5E-22 144.5 7.6 181 21-214 2-222 (265)
20 d1ny5a2 c.37.1.20 (A:138-384) 99.7 8.1E-15 5.9E-19 122.0 20.5 203 26-231 1-246 (247)
21 d1qvra2 c.37.1.20 (A:149-535) 99.6 1E-14 7.3E-19 128.6 17.5 199 14-217 11-241 (387)
22 d1d2na_ c.37.1.20 (A:) Hexamer 99.6 7.6E-15 5.6E-19 122.2 14.5 175 24-215 8-220 (246)
23 d1ofha_ c.37.1.20 (A:) HslU {H 99.6 2.8E-15 2E-19 129.3 10.1 147 27-180 16-211 (309)
24 d1r6bx3 c.37.1.20 (X:437-751) 99.6 6.6E-14 4.8E-18 120.7 18.4 167 25-202 22-258 (315)
25 d1qvra3 c.37.1.20 (A:536-850) 99.5 8.4E-14 6.1E-18 119.8 15.7 169 26-202 24-263 (315)
26 d1um8a_ c.37.1.20 (A:) ClpX {H 99.5 1.6E-13 1.2E-17 120.2 16.8 182 26-215 18-330 (364)
27 d1jbka_ c.37.1.20 (A:) ClpB, A 99.5 6.3E-14 4.6E-18 110.6 12.1 162 14-179 11-194 (195)
28 d1g8pa_ c.37.1.20 (A:) ATPase 99.5 2.9E-13 2.1E-17 118.1 17.1 211 20-230 1-300 (333)
29 d2fnaa2 c.37.1.20 (A:1-283) Ar 99.2 1.6E-10 1.2E-14 97.3 17.2 177 22-215 9-251 (283)
30 d1svma_ c.37.1.20 (A:) Papillo 99.2 3.1E-11 2.2E-15 105.3 10.6 150 48-215 156-332 (362)
31 d1w44a_ c.37.1.11 (A:) NTPase 99.1 2.6E-10 1.9E-14 96.9 12.1 119 49-180 126-271 (321)
32 d1iqpa1 a.80.1.1 (A:233-327) R 99.1 1.2E-09 8.8E-14 76.0 12.7 91 236-326 3-94 (95)
33 d2a5yb3 c.37.1.20 (B:109-385) 99.1 5.1E-09 3.7E-13 88.1 17.6 177 26-211 21-227 (277)
34 d1sxjc1 a.80.1.1 (C:239-333) R 99.0 6.8E-09 4.9E-13 72.2 12.5 92 235-326 1-94 (95)
35 d1sxjd1 a.80.1.1 (D:263-353) R 99.0 4.1E-09 3E-13 72.7 11.1 88 237-324 3-91 (91)
36 d1g41a_ c.37.1.20 (A:) HslU {H 98.9 4.1E-08 3E-12 87.5 17.5 56 26-86 15-84 (443)
37 d1sxjb1 a.80.1.1 (B:231-322) R 98.8 3.2E-08 2.3E-12 68.1 11.4 88 236-326 2-91 (92)
38 d1jqlb_ c.37.1.20 (B:) delta s 98.6 1.3E-07 9.8E-12 70.6 9.6 125 36-167 8-139 (140)
39 d1tuea_ c.37.1.20 (A:) Replica 98.4 1.4E-06 1E-10 67.7 10.9 116 33-168 39-172 (205)
40 d1ye8a1 c.37.1.11 (A:1-178) Hy 98.4 2.9E-07 2.1E-11 71.5 6.4 25 48-72 2-26 (178)
41 d1gvnb_ c.37.1.21 (B:) Plasmid 98.2 3E-07 2.2E-11 76.4 4.4 57 24-85 6-66 (273)
42 d1jr3d1 a.80.1.1 (D:212-338) d 98.1 7E-06 5.1E-10 59.7 8.3 84 239-322 2-121 (127)
43 d2i3ba1 c.37.1.11 (A:1-189) Ca 98.0 6.4E-06 4.6E-10 63.7 7.4 27 47-73 2-28 (189)
44 d1jr3a1 a.80.1.1 (A:243-368) g 98.0 7.6E-05 5.6E-09 53.9 12.1 93 236-328 3-121 (126)
45 d1a1va1 c.37.1.14 (A:190-325) 97.9 2.1E-05 1.5E-09 57.8 8.5 39 110-148 93-133 (136)
46 d1vmaa2 c.37.1.10 (A:82-294) G 97.9 3.1E-05 2.3E-09 61.2 9.9 91 45-136 9-120 (213)
47 d1yj5a2 c.37.1.1 (A:351-522) 5 97.9 2.3E-05 1.6E-09 60.2 8.8 82 49-146 17-98 (172)
48 d1w36d1 c.37.1.19 (D:2-360) Ex 97.9 2.8E-05 2E-09 66.9 10.2 118 30-155 150-301 (359)
49 d1ly1a_ c.37.1.1 (A:) Polynucl 97.9 7.1E-05 5.2E-09 55.7 11.4 22 49-70 5-26 (152)
50 d1u0ja_ c.37.1.20 (A:) Rep 40 97.9 4.3E-05 3.2E-09 62.8 10.3 112 35-168 91-228 (267)
51 d2qy9a2 c.37.1.10 (A:285-495) 97.8 4.4E-05 3.2E-09 60.1 9.7 32 44-75 6-38 (211)
52 d1rkba_ c.37.1.1 (A:) Adenylat 97.8 5.5E-06 4E-10 63.4 4.0 31 46-81 4-34 (173)
53 d1okkd2 c.37.1.10 (D:97-303) G 97.8 0.00011 7.9E-09 57.8 11.3 101 49-150 9-136 (207)
54 d1yksa1 c.37.1.14 (A:185-324) 97.8 1.8E-05 1.3E-09 58.1 5.8 39 109-148 96-136 (140)
55 d1kaga_ c.37.1.2 (A:) Shikimat 97.7 1.1E-05 7.8E-10 61.1 4.3 29 48-81 4-32 (169)
56 d1sxje1 a.80.1.1 (E:256-354) R 97.7 0.00041 3E-08 46.8 11.5 74 252-325 24-98 (99)
57 d2fz4a1 c.37.1.19 (A:24-229) D 97.7 6.3E-05 4.6E-09 59.4 8.5 111 27-149 69-204 (206)
58 d2iyva1 c.37.1.2 (A:2-166) Shi 97.7 1.2E-05 8.9E-10 61.2 4.0 32 47-83 2-33 (165)
59 d1j8yf2 c.37.1.10 (F:87-297) G 97.7 0.00012 8.5E-09 57.7 9.8 103 45-150 10-138 (211)
60 d1e6ca_ c.37.1.2 (A:) Shikimat 97.7 4.3E-05 3.1E-09 58.4 6.8 30 48-82 4-33 (170)
61 d1ls1a2 c.37.1.10 (A:89-295) G 97.7 0.0002 1.5E-08 56.3 10.8 99 49-148 13-132 (207)
62 d1qf9a_ c.37.1.1 (A:) UMP/CMP 97.6 0.00014 1E-08 56.7 9.1 22 49-70 9-30 (194)
63 d1knqa_ c.37.1.17 (A:) Glucona 97.6 3E-05 2.2E-09 59.0 4.9 26 45-70 4-30 (171)
64 d1lw7a2 c.37.1.1 (A:220-411) T 97.6 2E-05 1.5E-09 60.8 3.8 23 48-70 9-31 (192)
65 d1viaa_ c.37.1.2 (A:) Shikimat 97.5 2.9E-05 2.1E-09 58.8 3.9 30 48-82 2-31 (161)
66 d1bifa1 c.37.1.7 (A:37-249) 6- 97.5 9.2E-05 6.7E-09 58.3 6.4 26 47-72 2-28 (213)
67 d1x6va3 c.37.1.4 (A:34-228) Ad 97.4 4.9E-05 3.6E-09 59.1 4.1 25 49-73 22-46 (195)
68 d1np6a_ c.37.1.10 (A:) Molybdo 97.4 6.1E-05 4.5E-09 57.1 4.4 36 46-81 2-37 (170)
69 d1qhxa_ c.37.1.3 (A:) Chloramp 97.4 7E-05 5.1E-09 57.1 4.6 22 49-70 6-27 (178)
70 d1zp6a1 c.37.1.25 (A:6-181) Hy 97.4 4.1E-05 3E-09 58.5 3.2 31 49-84 7-37 (176)
71 d2bdta1 c.37.1.25 (A:1-176) Hy 97.4 5.6E-05 4.1E-09 57.5 3.9 22 49-70 5-26 (176)
72 d3ctda1 a.80.1.2 (A:258-420) U 97.4 0.0016 1.1E-07 48.3 11.6 51 236-286 2-53 (163)
73 d1m8pa3 c.37.1.15 (A:391-573) 97.3 6.5E-05 4.7E-09 57.5 3.5 25 49-73 9-33 (183)
74 d1ak2a1 c.37.1.1 (A:14-146,A:1 97.3 0.0011 7.9E-08 51.1 10.7 22 49-70 6-27 (190)
75 d1y63a_ c.37.1.1 (A:) Probable 97.3 7.2E-05 5.2E-09 57.0 3.6 23 48-70 7-29 (174)
76 d2pmka1 c.37.1.12 (A:467-707) 97.3 0.00029 2.1E-08 56.7 7.4 43 110-152 156-199 (241)
77 d2eyqa3 c.37.1.19 (A:546-778) 97.3 0.0013 9.3E-08 52.4 10.9 51 23-73 53-103 (233)
78 d1s3ga1 c.37.1.1 (A:1-125,A:16 97.2 0.0015 1.1E-07 49.9 11.0 22 49-70 3-24 (182)
79 d3adka_ c.37.1.1 (A:) Adenylat 97.2 0.00064 4.7E-08 52.7 8.9 23 48-70 10-32 (194)
80 d1zaka1 c.37.1.1 (A:3-127,A:15 97.2 0.00011 8.2E-09 57.0 3.5 24 47-70 4-27 (189)
81 d1ukza_ c.37.1.1 (A:) Uridylat 97.2 0.00016 1.2E-08 56.3 4.5 25 46-70 8-32 (196)
82 d1qdea_ c.37.1.19 (A:) Initiat 97.1 0.0016 1.2E-07 51.3 10.0 42 109-150 149-191 (212)
83 d3bgea1 a.80.1.2 (A:251-434) U 97.1 0.00079 5.8E-08 51.0 7.7 50 236-285 4-54 (184)
84 d2g9na1 c.37.1.19 (A:21-238) I 97.1 0.0028 2E-07 50.0 11.4 43 109-151 153-196 (218)
85 d1zina1 c.37.1.1 (A:1-125,A:16 97.1 0.00021 1.5E-08 54.8 4.4 22 49-70 3-24 (182)
86 d1g6oa_ c.37.1.11 (A:) Hexamer 97.1 0.0018 1.3E-07 54.3 10.7 94 31-139 153-260 (323)
87 d2qw6a1 a.80.1.2 (A:241-328) U 97.1 0.0071 5.1E-07 39.3 11.0 82 239-322 3-85 (88)
88 d1akya1 c.37.1.1 (A:3-130,A:16 97.1 0.00098 7.2E-08 50.9 8.3 22 49-70 5-26 (180)
89 d2cdna1 c.37.1.1 (A:1-181) Ade 97.1 0.0002 1.4E-08 55.0 4.1 23 48-70 2-24 (181)
90 d1hv8a1 c.37.1.19 (A:3-210) Pu 97.1 0.003 2.2E-07 49.4 11.2 41 109-149 143-184 (208)
91 d1t6na_ c.37.1.19 (A:) Spliceo 97.0 0.0078 5.7E-07 46.9 13.6 43 109-151 143-187 (207)
92 d1teva_ c.37.1.1 (A:) UMP/CMP 97.0 0.00025 1.8E-08 55.0 4.4 23 48-70 3-25 (194)
93 d2ak3a1 c.37.1.1 (A:0-124,A:16 97.0 0.00028 2E-08 54.7 4.6 25 46-70 6-30 (189)
94 d1veca_ c.37.1.19 (A:) DEAD bo 97.0 0.0034 2.5E-07 49.0 10.8 41 109-149 144-185 (206)
95 d1wp9a1 c.37.1.19 (A:1-200) pu 97.0 0.0006 4.4E-08 53.0 6.2 22 48-69 25-46 (200)
96 d1khta_ c.37.1.1 (A:) Adenylat 97.0 0.0003 2.2E-08 53.9 4.3 28 49-76 4-31 (190)
97 d1ckea_ c.37.1.1 (A:) CMP kina 96.9 0.00034 2.5E-08 55.4 4.6 24 47-70 4-27 (225)
98 d1tf7a2 c.37.1.11 (A:256-497) 96.9 0.00016 1.1E-08 58.3 2.5 37 37-73 15-53 (242)
99 d2p6ra3 c.37.1.19 (A:1-202) He 96.9 0.00086 6.3E-08 52.3 6.7 40 110-149 137-180 (202)
100 d2j0sa1 c.37.1.19 (A:22-243) P 96.8 0.0044 3.2E-07 48.9 10.3 42 109-150 157-199 (222)
101 d3b60a1 c.37.1.12 (A:329-581) 96.8 0.0024 1.7E-07 51.6 8.7 42 111-152 170-212 (253)
102 d1e4va1 c.37.1.1 (A:1-121,A:15 96.8 0.00042 3.1E-08 53.0 3.9 22 49-70 3-24 (179)
103 d1s2ma1 c.37.1.19 (A:46-251) P 96.8 0.0052 3.8E-07 47.8 10.4 42 109-150 141-183 (206)
104 d2hyda1 c.37.1.12 (A:324-578) 96.7 0.002 1.5E-07 52.0 7.8 42 111-152 172-214 (255)
105 d3d31a2 c.37.1.12 (A:1-229) Su 96.7 0.0026 1.9E-07 50.3 8.3 42 110-151 144-188 (229)
106 d1p9ra_ c.37.1.11 (A:) Extrace 96.7 0.0053 3.9E-07 53.1 11.0 93 21-123 134-239 (401)
107 d1q3ta_ c.37.1.1 (A:) CMP kina 96.7 0.00056 4.1E-08 54.2 4.2 22 49-70 6-27 (223)
108 d1m7ga_ c.37.1.4 (A:) Adenosin 96.7 0.00039 2.8E-08 54.8 3.0 34 38-71 16-49 (208)
109 d2r9ga1 a.80.1.2 (A:238-423) U 96.7 0.016 1.2E-06 43.7 12.0 54 236-290 3-57 (186)
110 d1nksa_ c.37.1.1 (A:) Adenylat 96.7 0.00057 4.1E-08 52.5 3.7 25 49-73 4-28 (194)
111 d1jj7a_ c.37.1.12 (A:) Peptide 96.7 0.0045 3.3E-07 49.8 9.3 42 110-151 168-212 (251)
112 d1v43a3 c.37.1.12 (A:7-245) Hy 96.6 0.0016 1.2E-07 52.0 6.4 42 110-151 153-197 (239)
113 d2gj8a1 c.37.1.8 (A:216-376) P 96.6 0.0033 2.4E-07 46.6 8.0 100 49-151 4-122 (161)
114 d1rz3a_ c.37.1.6 (A:) Hypothet 96.6 0.0013 9.2E-08 50.7 5.6 25 49-73 25-49 (198)
115 d1pzna2 c.37.1.11 (A:96-349) D 96.6 0.0018 1.3E-07 52.0 6.8 35 37-71 25-61 (254)
116 d1mv5a_ c.37.1.12 (A:) Multidr 96.6 0.0016 1.2E-07 52.2 6.2 23 49-71 31-53 (242)
117 d1z2aa1 c.37.1.8 (A:8-171) Rab 96.6 0.0018 1.3E-07 48.5 6.0 21 49-69 5-25 (164)
118 d1r8sa_ c.37.1.8 (A:) ADP-ribo 96.6 0.024 1.8E-06 41.3 12.5 22 49-70 3-24 (160)
119 d1u94a1 c.37.1.11 (A:6-268) Re 96.6 0.0055 4E-07 49.6 9.2 47 36-84 41-90 (263)
120 d1q0ua_ c.37.1.19 (A:) Probabl 96.5 0.0061 4.4E-07 47.5 8.9 41 110-150 146-187 (209)
121 d1r2qa_ c.37.1.8 (A:) Rab5a {H 96.4 0.0046 3.4E-07 46.4 7.4 23 49-71 9-31 (170)
122 d1szpa2 c.37.1.11 (A:145-395) 96.4 0.005 3.7E-07 48.9 7.9 51 37-87 23-79 (251)
123 d1gm5a3 c.37.1.19 (A:286-549) 96.3 0.0043 3.1E-07 50.2 7.3 44 28-71 86-129 (264)
124 d2awna2 c.37.1.12 (A:4-235) Ma 96.3 0.003 2.2E-07 50.1 6.2 42 110-151 147-191 (232)
125 d1wf3a1 c.37.1.8 (A:3-180) GTP 96.3 0.018 1.3E-06 43.3 10.7 101 49-152 8-126 (178)
126 d1xjca_ c.37.1.10 (A:) Molybdo 96.3 0.0013 9.2E-08 49.5 3.7 33 49-81 4-36 (165)
127 d2p67a1 c.37.1.10 (A:1-327) LA 96.3 0.0029 2.1E-07 53.1 6.2 44 44-87 52-95 (327)
128 d2onka1 c.37.1.12 (A:1-240) Mo 96.3 0.0015 1.1E-07 52.1 4.1 42 110-151 143-187 (240)
129 d1l2ta_ c.37.1.12 (A:) MJ0796 96.3 0.01 7.4E-07 46.9 9.0 42 110-151 162-206 (230)
130 d1gkya_ c.37.1.1 (A:) Guanylat 96.2 0.0012 8.8E-08 50.8 3.3 23 49-71 4-26 (186)
131 d1yzqa1 c.37.1.8 (A:14-177) Ra 96.2 0.01 7.5E-07 44.0 8.7 22 49-70 3-24 (164)
132 d1v5wa_ c.37.1.11 (A:) Meiotic 96.2 0.006 4.3E-07 48.8 7.8 36 37-72 26-63 (258)
133 d1n0wa_ c.37.1.11 (A:) DNA rep 96.2 0.0013 9.4E-08 51.5 3.5 37 37-73 12-50 (242)
134 d2ew1a1 c.37.1.8 (A:4-174) Rab 96.2 0.0046 3.4E-07 46.5 6.6 22 49-70 8-29 (171)
135 d1kaoa_ c.37.1.8 (A:) Rap2a {H 96.2 0.023 1.6E-06 42.2 10.5 22 49-70 6-27 (167)
136 d1g2912 c.37.1.12 (1:1-240) Ma 96.2 0.018 1.3E-06 45.7 10.0 42 110-151 156-200 (240)
137 d1zj6a1 c.37.1.8 (A:2-178) ADP 96.2 0.026 1.9E-06 42.1 10.9 33 36-69 6-38 (177)
138 d1lvga_ c.37.1.1 (A:) Guanylat 96.2 0.0015 1.1E-07 50.4 3.5 22 49-70 3-24 (190)
139 d1ctqa_ c.37.1.8 (A:) cH-p21 R 96.1 0.011 7.9E-07 44.0 8.3 22 49-70 6-27 (166)
140 d1kmqa_ c.37.1.8 (A:) RhoA {Hu 96.1 0.0024 1.7E-07 48.5 4.2 24 49-72 5-28 (177)
141 d1mo6a1 c.37.1.11 (A:1-269) Re 96.1 0.015 1.1E-06 47.1 9.3 50 36-87 47-99 (269)
142 d1zd9a1 c.37.1.8 (A:18-181) AD 96.0 0.013 9.8E-07 43.4 8.4 23 49-71 5-27 (164)
143 d1htwa_ c.37.1.18 (A:) Hypothe 96.0 0.0043 3.1E-07 45.9 5.3 48 25-72 5-59 (158)
144 d1u8za_ c.37.1.8 (A:) Ras-rela 96.0 0.013 9.3E-07 43.8 8.2 22 49-70 7-28 (168)
145 d1r0wa_ c.37.1.12 (A:) Cystic 96.0 0.013 9.6E-07 47.8 8.7 23 49-71 65-87 (281)
146 d1znwa1 c.37.1.1 (A:20-201) Gu 96.0 0.002 1.5E-07 49.2 3.3 23 49-71 5-27 (182)
147 d1mh1a_ c.37.1.8 (A:) Rac {Hum 95.9 0.0067 4.9E-07 46.1 6.2 22 49-70 8-29 (183)
148 d1x1ra1 c.37.1.8 (A:10-178) Ra 95.9 0.027 2E-06 41.9 9.6 22 49-70 7-28 (169)
149 d2a5ja1 c.37.1.8 (A:9-181) Rab 95.9 0.0084 6.1E-07 45.1 6.6 21 49-69 6-26 (173)
150 d1xp8a1 c.37.1.11 (A:15-282) R 95.9 0.012 8.9E-07 47.6 8.0 48 37-86 45-95 (268)
151 d2fn4a1 c.37.1.8 (A:24-196) r- 95.9 0.0058 4.3E-07 46.0 5.6 23 49-71 9-31 (173)
152 d2b8ta1 c.37.1.24 (A:11-149) T 95.8 0.02 1.5E-06 41.3 8.2 89 50-147 6-112 (139)
153 d3raba_ c.37.1.8 (A:) Rab3a {R 95.8 0.014 9.9E-07 43.6 7.6 22 49-70 8-29 (169)
154 d2qm8a1 c.37.1.10 (A:5-327) Me 95.8 0.0056 4.1E-07 51.2 5.7 38 49-86 54-91 (323)
155 d1z0fa1 c.37.1.8 (A:8-173) Rab 95.8 0.019 1.4E-06 42.6 8.2 22 49-70 7-28 (166)
156 d1ksha_ c.37.1.8 (A:) ADP-ribo 95.8 0.0085 6.2E-07 44.5 6.1 99 48-152 4-114 (165)
157 d1ji0a_ c.37.1.12 (A:) Branche 95.7 0.034 2.4E-06 44.1 9.9 43 110-152 156-200 (240)
158 d2f9la1 c.37.1.8 (A:8-182) Rab 95.7 0.0081 5.9E-07 45.2 5.9 22 49-70 7-28 (175)
159 d2bmea1 c.37.1.8 (A:6-179) Rab 95.7 0.013 9.6E-07 43.9 7.1 21 49-69 8-28 (174)
160 d1m7ba_ c.37.1.8 (A:) RhoE (RN 95.7 0.0055 4E-07 46.5 4.9 23 49-71 5-27 (179)
161 d2fh5b1 c.37.1.8 (B:63-269) Si 95.6 0.027 2E-06 43.4 8.9 23 48-70 2-24 (207)
162 d1s96a_ c.37.1.1 (A:) Guanylat 95.6 0.0051 3.7E-07 47.9 4.3 23 49-71 5-27 (205)
163 d2atxa1 c.37.1.8 (A:9-193) Rho 95.6 0.0066 4.8E-07 46.3 5.0 23 49-71 12-34 (185)
164 d1vpla_ c.37.1.12 (A:) Putativ 95.6 0.013 9.4E-07 46.6 6.8 42 110-151 150-193 (238)
165 d1nn5a_ c.37.1.1 (A:) Thymidyl 95.5 0.0046 3.4E-07 48.3 3.8 27 49-75 6-32 (209)
166 d1sq5a_ c.37.1.6 (A:) Pantothe 95.5 0.016 1.1E-06 47.9 7.3 39 45-83 78-117 (308)
167 d2erya1 c.37.1.8 (A:10-180) r- 95.5 0.013 9.8E-07 43.7 6.4 22 49-70 8-29 (171)
168 d4tmka_ c.37.1.1 (A:) Thymidyl 95.5 0.0065 4.7E-07 47.3 4.6 27 49-75 5-31 (210)
169 d1kgda_ c.37.1.1 (A:) Guanylat 95.5 0.0045 3.2E-07 47.1 3.4 24 48-71 5-28 (178)
170 d1i2ma_ c.37.1.8 (A:) Ran {Hum 95.4 0.0064 4.7E-07 45.6 4.3 21 49-69 6-26 (170)
171 d1c1ya_ c.37.1.8 (A:) Rap1A {H 95.4 0.014 1E-06 43.4 6.1 23 49-71 6-28 (167)
172 d2gjsa1 c.37.1.8 (A:91-258) Ra 95.4 0.019 1.4E-06 42.7 6.9 21 49-69 4-24 (168)
173 d1wmsa_ c.37.1.8 (A:) Rab9a {H 95.4 0.02 1.5E-06 42.8 7.0 22 49-70 9-30 (174)
174 d1uj2a_ c.37.1.6 (A:) Uridine- 95.3 0.0053 3.9E-07 48.0 3.7 23 49-71 5-27 (213)
175 d2erxa1 c.37.1.8 (A:6-176) di- 95.3 0.013 9.8E-07 43.7 5.9 21 49-69 5-25 (171)
176 d2g6ba1 c.37.1.8 (A:58-227) Ra 95.3 0.034 2.5E-06 41.3 8.1 21 49-69 9-29 (170)
177 d1ewqa2 c.37.1.12 (A:542-765) 95.3 0.088 6.4E-06 41.1 10.8 98 49-150 38-156 (224)
178 d1g5ta_ c.37.1.11 (A:) ATP:cor 95.2 0.11 8E-06 38.0 10.5 51 109-165 92-148 (157)
179 d1rifa_ c.37.1.23 (A:) DNA hel 95.2 0.026 1.9E-06 46.1 7.7 42 27-71 112-153 (282)
180 d1e0sa_ c.37.1.8 (A:) ADP-ribo 95.2 0.0088 6.4E-07 44.9 4.4 21 48-68 14-34 (173)
181 d2ngra_ c.37.1.8 (A:) CDC42 {H 95.2 0.008 5.9E-07 46.0 4.2 23 49-71 6-28 (191)
182 d1wb9a2 c.37.1.12 (A:567-800) 95.2 0.077 5.6E-06 41.8 10.2 22 49-70 44-65 (234)
183 d2i1qa2 c.37.1.11 (A:65-322) D 95.2 0.0044 3.2E-07 49.4 2.8 35 37-71 23-59 (258)
184 d2bcgy1 c.37.1.8 (Y:3-196) GTP 95.2 0.012 8.6E-07 45.2 5.2 22 49-70 9-30 (194)
185 d2bmfa2 c.37.1.14 (A:178-482) 95.1 0.052 3.8E-06 44.3 9.6 19 109-127 98-116 (305)
186 d1g6ha_ c.37.1.12 (A:) MJ1267 95.1 0.044 3.2E-06 43.9 8.7 52 110-162 167-220 (254)
187 d1h65a_ c.37.1.8 (A:) Chloropl 95.1 0.093 6.8E-06 41.9 10.7 34 36-69 20-55 (257)
188 d1tf7a1 c.37.1.11 (A:14-255) C 95.1 0.0043 3.1E-07 49.0 2.4 33 37-69 15-49 (242)
189 d1z0ja1 c.37.1.8 (A:2-168) Rab 95.1 0.036 2.6E-06 41.0 7.6 23 49-71 7-29 (167)
190 d1gsia_ c.37.1.1 (A:) Thymidyl 95.0 0.012 8.5E-07 45.6 4.8 25 49-73 3-27 (208)
191 d1ky3a_ c.37.1.8 (A:) Rab-rela 95.0 0.022 1.6E-06 42.5 6.3 22 49-70 5-26 (175)
192 d2vp4a1 c.37.1.1 (A:12-208) De 94.9 0.0049 3.6E-07 47.4 2.2 27 45-71 7-34 (197)
193 d1l7vc_ c.37.1.12 (C:) ABC tra 94.8 0.05 3.7E-06 42.8 8.0 41 111-151 150-192 (231)
194 d1nrjb_ c.37.1.8 (B:) Signal r 94.8 0.0092 6.7E-07 46.1 3.5 24 47-70 4-27 (209)
195 d1ek0a_ c.37.1.8 (A:) Ypt51 {B 94.7 0.046 3.4E-06 40.5 7.4 22 49-70 6-27 (170)
196 d1kkma_ c.91.1.2 (A:) HPr kina 94.7 0.0094 6.8E-07 44.9 3.1 21 49-69 17-37 (176)
197 d1yrba1 c.37.1.10 (A:1-244) AT 94.6 0.01 7.6E-07 47.0 3.5 23 49-71 3-25 (244)
198 d1u0la2 c.37.1.8 (A:69-293) Pr 94.6 0.013 9.1E-07 46.1 3.8 34 33-69 85-118 (225)
199 d1tmka_ c.37.1.1 (A:) Thymidyl 94.5 0.049 3.6E-06 42.3 7.3 24 48-71 5-28 (214)
200 d1mkya1 c.37.1.8 (A:2-172) Pro 94.4 0.07 5.1E-06 39.5 7.8 21 49-69 3-23 (171)
201 d1g16a_ c.37.1.8 (A:) Rab-rela 94.4 0.029 2.1E-06 41.5 5.4 22 49-70 5-26 (166)
202 d1upta_ c.37.1.8 (A:) ADP-ribo 94.3 0.012 9E-07 43.4 3.2 22 49-70 8-29 (169)
203 d2fu5c1 c.37.1.8 (C:3-175) Rab 94.3 0.049 3.6E-06 40.5 6.7 22 49-70 9-30 (173)
204 d1f6ba_ c.37.1.8 (A:) SAR1 {Ch 94.3 0.014 1E-06 43.8 3.5 21 49-69 16-36 (186)
205 d1svia_ c.37.1.8 (A:) Probable 94.2 0.012 8.9E-07 45.0 3.1 25 44-68 21-45 (195)
206 d2qtvb1 c.37.1.8 (B:24-189) SA 94.2 0.014 1E-06 42.8 3.2 22 49-70 3-24 (166)
207 d1knxa2 c.91.1.2 (A:133-309) H 94.2 0.009 6.6E-07 45.0 2.0 21 49-69 18-38 (177)
208 d1odfa_ c.37.1.6 (A:) Hypothet 94.1 0.038 2.7E-06 45.0 5.9 23 49-71 30-52 (286)
209 d1ko7a2 c.91.1.2 (A:130-298) H 94.0 0.012 8.9E-07 44.0 2.6 21 49-69 18-38 (169)
210 d1uaaa1 c.37.1.19 (A:2-307) DE 93.8 0.028 2E-06 46.1 4.7 18 48-65 16-33 (306)
211 d1z08a1 c.37.1.8 (A:17-183) Ra 93.8 0.019 1.4E-06 42.7 3.3 22 49-70 6-27 (167)
212 d1pjra1 c.37.1.19 (A:1-318) DE 93.7 0.048 3.5E-06 44.9 6.1 23 48-70 26-49 (318)
213 d2ocpa1 c.37.1.1 (A:37-277) De 93.7 0.017 1.2E-06 45.8 3.1 24 49-72 5-28 (241)
214 d2atva1 c.37.1.8 (A:5-172) Ras 93.7 0.02 1.4E-06 42.6 3.3 22 49-70 5-26 (168)
215 d1oywa2 c.37.1.19 (A:1-206) Re 93.7 0.029 2.1E-06 43.2 4.4 21 48-68 42-62 (206)
216 d1a7ja_ c.37.1.6 (A:) Phosphor 93.6 0.009 6.5E-07 48.8 1.1 27 47-73 5-31 (288)
217 d2f7sa1 c.37.1.8 (A:5-190) Rab 93.4 0.021 1.5E-06 43.2 3.1 21 49-69 8-28 (186)
218 d1e2ka_ c.37.1.1 (A:) Thymidin 93.4 0.097 7E-06 43.4 7.4 23 49-71 7-29 (329)
219 d1z06a1 c.37.1.8 (A:32-196) Ra 93.4 0.024 1.8E-06 41.9 3.3 22 49-70 5-26 (165)
220 d1vg8a_ c.37.1.8 (A:) Rab7 {Ra 93.3 0.025 1.8E-06 42.8 3.3 21 49-69 5-25 (184)
221 d1p5zb_ c.37.1.1 (B:) Deoxycyt 93.3 0.01 7.4E-07 47.0 1.0 24 48-71 4-27 (241)
222 d1sgwa_ c.37.1.12 (A:) Putativ 93.3 0.019 1.4E-06 44.3 2.6 23 49-71 30-52 (200)
223 d1ihua1 c.37.1.10 (A:1-296) Ar 93.2 0.032 2.3E-06 45.5 4.0 38 46-83 7-45 (296)
224 d1ihua2 c.37.1.10 (A:308-586) 92.9 0.067 4.9E-06 43.1 5.6 40 37-76 11-50 (279)
225 d1xtqa1 c.37.1.8 (A:3-169) GTP 92.9 0.025 1.8E-06 41.9 2.7 22 49-70 7-28 (167)
226 d1uf9a_ c.37.1.1 (A:) Dephosph 92.9 0.032 2.3E-06 42.4 3.3 20 49-68 6-25 (191)
227 d1x3sa1 c.37.1.8 (A:2-178) Rab 92.9 0.031 2.3E-06 41.9 3.2 22 49-70 10-31 (177)
228 d1nlfa_ c.37.1.11 (A:) Hexamer 92.8 0.028 2E-06 45.4 3.0 23 49-71 32-54 (274)
229 d1egaa1 c.37.1.8 (A:4-182) GTP 92.7 0.32 2.4E-05 35.7 9.1 21 49-69 8-28 (179)
230 d1lkxa_ c.37.1.9 (A:) Myosin S 92.7 0.098 7.2E-06 48.1 6.9 59 12-70 50-110 (684)
231 d2g3ya1 c.37.1.8 (A:73-244) GT 92.6 0.034 2.5E-06 41.5 3.1 21 49-69 6-26 (172)
232 d1cr2a_ c.37.1.11 (A:) Gene 4 92.5 0.055 4E-06 43.7 4.5 22 49-70 38-59 (277)
233 g1f2t.1 c.37.1.12 (A:,B:) Rad5 92.4 0.045 3.3E-06 44.2 3.8 24 48-71 24-48 (292)
234 d1fzqa_ c.37.1.8 (A:) ADP-ribo 92.4 0.029 2.1E-06 41.9 2.4 20 49-68 19-38 (176)
235 d3dhwc1 c.37.1.12 (C:1-240) Me 92.3 0.025 1.9E-06 44.8 2.0 22 49-70 34-55 (240)
236 d1oxxk2 c.37.1.12 (K:1-242) Gl 92.2 0.026 1.9E-06 44.7 2.0 23 49-71 34-56 (242)
237 d1tq4a_ c.37.1.8 (A:) Interfer 92.2 0.55 4E-05 39.9 10.8 21 48-68 58-78 (400)
238 d1udxa2 c.37.1.8 (A:157-336) O 92.1 0.034 2.5E-06 41.7 2.5 22 47-68 2-23 (180)
239 d2cxxa1 c.37.1.8 (A:2-185) GTP 92.1 0.032 2.3E-06 41.9 2.3 22 48-69 2-23 (184)
240 d1d0xa2 c.37.1.9 (A:2-33,A:80- 91.9 0.14 1E-05 47.2 6.9 57 14-70 91-149 (712)
241 d1z63a1 c.37.1.19 (A:432-661) 91.9 0.18 1.3E-05 39.2 6.9 113 49-164 34-176 (230)
242 d1azta2 c.37.1.8 (A:35-65,A:20 91.6 0.12 8.7E-06 40.2 5.3 29 49-77 9-37 (221)
243 d1vhta_ c.37.1.1 (A:) Dephosph 91.5 0.057 4.2E-06 41.7 3.3 20 49-68 6-25 (208)
244 d1b0ua_ c.37.1.12 (A:) ATP-bin 91.4 0.044 3.2E-06 43.9 2.6 22 49-70 31-52 (258)
245 d1xx6a1 c.37.1.24 (A:2-142) Th 91.3 0.11 7.8E-06 37.3 4.4 35 110-147 79-113 (141)
246 d1moza_ c.37.1.8 (A:) ADP-ribo 91.3 0.03 2.2E-06 42.1 1.4 19 49-67 20-38 (182)
247 d2bmja1 c.37.1.8 (A:66-240) Ce 91.3 0.086 6.3E-06 39.4 4.0 22 49-70 8-29 (175)
248 d1gkub1 c.37.1.16 (B:1-250) He 91.3 0.061 4.5E-06 42.3 3.3 34 35-71 50-83 (237)
249 d1br2a2 c.37.1.9 (A:80-789) My 91.0 0.2 1.4E-05 46.2 7.0 57 15-71 58-116 (710)
250 d1lnza2 c.37.1.8 (A:158-342) O 91.0 0.049 3.6E-06 40.9 2.4 22 47-68 2-23 (185)
251 d1xbta1 c.37.1.24 (A:18-150) T 91.0 0.23 1.7E-05 35.1 5.9 92 50-147 6-105 (133)
252 d1deka_ c.37.1.1 (A:) Deoxynuc 90.9 0.067 4.9E-06 42.1 3.2 22 49-70 4-25 (241)
253 d1zcba2 c.37.1.8 (A:47-75,A:20 90.9 0.062 4.5E-06 40.8 2.9 18 49-66 5-22 (200)
254 d1e9ra_ c.37.1.11 (A:) Bacteri 90.8 0.064 4.6E-06 46.3 3.3 37 47-85 51-87 (433)
255 d1w7ja2 c.37.1.9 (A:63-792) My 90.8 0.2 1.5E-05 46.3 6.9 57 14-70 60-118 (730)
256 d1puia_ c.37.1.8 (A:) Probable 90.7 0.035 2.5E-06 41.6 1.3 24 45-68 15-38 (188)
257 d1qhla_ c.37.1.12 (A:) Cell di 90.7 0.037 2.7E-06 42.1 1.4 24 49-72 27-50 (222)
258 d1jjva_ c.37.1.1 (A:) Dephosph 90.6 0.063 4.6E-06 41.3 2.7 20 49-68 5-24 (205)
259 d2mysa2 c.37.1.9 (A:4-33,A:80- 90.6 0.21 1.5E-05 46.6 6.7 56 16-71 91-148 (794)
260 g1xew.1 c.37.1.12 (X:,Y:) Smc 90.2 0.075 5.4E-06 43.9 3.0 24 48-71 27-51 (329)
261 d1kk8a2 c.37.1.9 (A:1-28,A:77- 90.1 0.21 1.5E-05 46.6 6.3 57 15-71 88-146 (789)
262 d1mkya2 c.37.1.8 (A:173-358) P 90.1 0.086 6.3E-06 39.5 3.1 21 49-69 11-31 (186)
263 d1cp2a_ c.37.1.10 (A:) Nitroge 89.9 0.12 9E-06 41.3 4.0 36 49-84 4-39 (269)
264 d1nija1 c.37.1.10 (A:2-223) Hy 89.8 0.058 4.2E-06 42.2 1.9 25 46-70 3-27 (222)
265 g1ii8.1 c.37.1.12 (A:,B:) Rad5 89.8 0.11 8.2E-06 42.7 3.8 23 49-71 26-48 (369)
266 d2jdia3 c.37.1.11 (A:95-379) C 89.7 1.3 9.4E-05 35.5 10.2 93 49-146 71-174 (285)
267 d1p6xa_ c.37.1.1 (A:) Thymidin 89.7 0.077 5.6E-06 44.1 2.7 24 49-72 9-32 (333)
268 d2bcjq2 c.37.1.8 (Q:38-66,Q:18 89.6 0.086 6.2E-06 39.8 2.7 23 49-71 5-27 (200)
269 d1xzpa2 c.37.1.8 (A:212-371) T 89.6 0.036 2.6E-06 40.6 0.4 22 49-70 3-24 (160)
270 d1xpua3 c.37.1.11 (A:129-417) 89.2 0.63 4.6E-05 37.4 7.8 24 48-71 45-68 (289)
271 d1t9ha2 c.37.1.8 (A:68-298) Pr 89.2 0.04 2.9E-06 43.2 0.4 22 49-70 100-121 (231)
272 d1t5la1 c.37.1.19 (A:2-414) Nu 89.1 0.3 2.2E-05 41.7 6.1 65 29-100 15-79 (413)
273 d2jdid3 c.37.1.11 (D:82-357) C 89.0 2 0.00014 34.1 10.7 96 48-146 70-174 (276)
274 d1svsa1 c.37.1.8 (A:32-60,A:18 88.9 0.13 9.3E-06 38.6 3.2 22 49-70 5-26 (195)
275 d1osna_ c.37.1.1 (A:) Thymidin 88.4 0.077 5.6E-06 44.1 1.7 24 49-72 8-31 (331)
276 d1d2ea3 c.37.1.8 (A:55-250) El 87.7 3.6 0.00026 30.6 11.1 22 49-70 6-27 (196)
277 d2dy1a2 c.37.1.8 (A:8-274) Elo 87.6 2.1 0.00015 33.8 10.0 23 48-70 4-26 (267)
278 d1wb1a4 c.37.1.8 (A:1-179) Elo 87.5 2.7 0.0002 30.6 10.2 20 49-68 8-27 (179)
279 d2afhe1 c.37.1.10 (E:1-289) Ni 87.3 0.18 1.3E-05 40.8 3.4 36 49-84 5-40 (289)
280 d1e69a_ c.37.1.12 (A:) Smc hea 87.2 0.11 8E-06 42.4 2.0 22 49-70 27-48 (308)
281 d1g8fa3 c.37.1.15 (A:390-511) 87.1 0.51 3.7E-05 32.5 5.0 36 49-84 9-44 (122)
282 d1w1wa_ c.37.1.12 (A:) Smc hea 87.1 0.18 1.3E-05 42.9 3.5 23 48-70 26-49 (427)
283 d1fx0a3 c.37.1.11 (A:97-372) C 86.8 0.9 6.6E-05 36.3 7.3 90 49-146 70-165 (276)
284 d1byia_ c.37.1.10 (A:) Dethiob 86.5 0.17 1.2E-05 38.8 2.6 30 48-77 3-33 (224)
285 d2bv3a2 c.37.1.8 (A:7-282) Elo 86.4 1.9 0.00014 34.3 9.0 24 47-70 7-30 (276)
286 d1z3ix2 c.37.1.19 (X:92-389) R 85.7 1.5 0.00011 35.2 8.4 41 111-152 192-232 (298)
287 d1g7sa4 c.37.1.8 (A:1-227) Ini 85.4 1.3 9.4E-05 34.0 7.5 24 47-70 6-29 (227)
288 d1c4oa1 c.37.1.19 (A:2-409) Nu 84.7 0.83 6E-05 38.8 6.4 64 30-100 13-76 (408)
289 d1a5ta1 a.80.1.1 (A:208-330) d 84.3 2.3 0.00017 29.2 7.5 51 274-326 65-117 (123)
290 d2c78a3 c.37.1.8 (A:9-212) Elo 83.7 6.9 0.0005 29.1 13.3 21 49-69 6-26 (204)
291 d1hyqa_ c.37.1.10 (A:) Cell di 83.4 0.41 3E-05 36.9 3.6 27 50-76 6-32 (232)
292 d1e69a_ c.37.1.12 (A:) Smc hea 82.7 1.1 7.9E-05 36.0 6.2 43 110-152 240-283 (308)
293 d1bg2a_ c.37.1.9 (A:) Kinesin 80.3 0.77 5.6E-05 37.6 4.4 42 23-64 45-94 (323)
294 d1n0ua2 c.37.1.8 (A:3-343) Elo 80.1 5.8 0.00043 32.3 9.9 35 36-70 6-41 (341)
295 d1j3ba1 c.91.1.1 (A:212-529) P 79.5 0.31 2.2E-05 39.8 1.5 23 165-187 185-207 (318)
296 d2olra1 c.91.1.1 (A:228-540) P 78.2 0.45 3.3E-05 38.6 2.1 23 165-187 184-206 (313)
297 d1g3qa_ c.37.1.10 (A:) Cell di 77.9 0.69 5E-05 35.5 3.2 28 49-76 5-33 (237)
298 d1f9va_ c.37.1.9 (A:) Kinesin 77.1 1.1 8.2E-05 36.9 4.5 41 23-63 53-100 (342)
299 d1ys7a2 c.23.1.1 (A:7-127) Tra 76.8 5.1 0.00037 27.0 7.3 72 112-186 46-120 (121)
300 g1qhh.1 c.37.1.19 (A:,B:,C:,D: 76.1 1.1 7.8E-05 40.0 4.4 23 48-70 26-49 (623)
301 d2akab1 c.37.1.8 (B:6-304) Dyn 75.8 1.4 0.0001 35.3 4.7 25 45-69 25-49 (299)
302 d1goja_ c.37.1.9 (A:) Kinesin 75.7 1.1 8.1E-05 37.1 4.1 35 29-63 59-97 (354)
303 d1ry6a_ c.37.1.9 (A:) Kinesin 75.4 0.69 5E-05 38.1 2.6 37 28-64 62-103 (330)
304 g1f2t.1 c.37.1.12 (A:,B:) Rad5 74.9 2 0.00015 33.7 5.4 43 110-152 224-268 (292)
305 d1ii2a1 c.91.1.1 (A:201-523) P 74.7 0.66 4.8E-05 37.8 2.2 27 162-188 182-208 (323)
306 d1sdma_ c.37.1.9 (A:) Kinesin 73.4 0.72 5.2E-05 38.5 2.2 35 29-63 55-92 (364)
307 d2ncda_ c.37.1.9 (A:) Kinesin 73.3 0.72 5.3E-05 38.6 2.2 35 29-63 105-142 (368)
308 d2qn6a3 c.37.1.8 (A:2-206) Ini 73.2 11 0.00078 27.8 9.1 23 46-68 6-30 (205)
309 d1x88a1 c.37.1.9 (A:18-362) Ki 73.0 1.4 9.9E-05 36.4 3.9 35 29-63 60-98 (345)
310 d2zfia1 c.37.1.9 (A:4-352) Kin 72.9 1.6 0.00012 36.0 4.4 34 30-63 67-104 (349)
311 d1c9ka_ c.37.1.11 (A:) Adenosy 70.5 1.2 8.6E-05 33.0 2.6 20 49-68 2-21 (180)
312 d1v8ka_ c.37.1.9 (A:) Kinesin 68.0 1.4 0.0001 36.7 2.8 36 29-64 93-132 (362)
313 d1jwyb_ c.37.1.8 (B:) Dynamin 67.6 1.6 0.00012 35.1 3.2 25 45-69 23-47 (306)
314 d1tafb_ a.22.1.3 (B:) TAF(II)6 66.9 7.3 0.00053 23.4 5.2 53 179-231 12-67 (70)
315 d1ni3a1 c.37.1.8 (A:11-306) Yc 63.8 1.8 0.00013 34.7 2.7 21 49-69 13-33 (296)
316 d1wrba1 c.37.1.19 (A:164-401) 62.3 3.3 0.00024 31.9 3.9 30 39-70 53-83 (238)
317 d1u0sy_ c.23.1.1 (Y:) CheY pro 61.8 8 0.00058 25.8 5.5 69 112-182 47-117 (118)
318 d1a04a2 c.23.1.1 (A:5-142) Nit 61.3 17 0.0012 24.7 7.5 85 112-199 49-135 (138)
319 d1wd5a_ c.61.1.1 (A:) Putative 61.1 27 0.002 25.6 10.5 40 31-71 7-46 (208)
320 d1qkka_ c.23.1.1 (A:) Transcri 60.4 4.4 0.00032 28.1 4.0 74 110-185 43-118 (140)
321 g1ii8.1 c.37.1.12 (A:,B:) Rad5 60.3 4.8 0.00035 32.1 4.9 41 111-151 302-344 (369)
322 d1f5na2 c.37.1.8 (A:7-283) Int 60.2 1.8 0.00013 34.5 2.0 42 27-70 15-56 (277)
323 d1dbwa_ c.23.1.1 (A:) Transcri 59.6 14 0.001 24.6 6.6 71 111-183 47-119 (123)
324 d1puja_ c.37.1.8 (A:) Probable 59.5 5.4 0.00039 31.3 4.8 21 49-69 115-135 (273)
325 d1krwa_ c.23.1.1 (A:) NTRC rec 57.6 5.5 0.0004 26.8 4.1 73 111-185 47-121 (123)
326 d1p2fa2 c.23.1.1 (A:1-120) Res 57.4 16 0.0012 24.2 6.5 74 111-186 43-118 (120)
327 d1w36b1 c.37.1.19 (B:1-485) Ex 57.0 3.7 0.00027 34.8 3.7 24 48-71 18-42 (485)
328 d1zunb3 c.37.1.8 (B:16-237) Su 55.7 36 0.0026 25.3 10.4 22 49-70 12-33 (222)
329 d1ny5a1 c.23.1.1 (A:1-137) Tra 55.5 14 0.001 25.2 6.0 71 112-184 45-117 (137)
330 d2b4aa1 c.23.1.1 (A:2-119) Hyp 52.2 23 0.0017 23.3 6.6 67 112-181 48-114 (118)
331 d1w1wa_ c.37.1.12 (A:) Smc hea 51.9 8.8 0.00064 31.6 5.3 40 112-151 355-396 (427)
332 d1kgsa2 c.23.1.1 (A:2-123) Pho 50.9 13 0.00098 24.7 5.2 72 112-185 46-119 (122)
333 d1jnya3 c.37.1.8 (A:4-227) Elo 50.5 5.3 0.00038 30.3 3.2 20 49-68 6-25 (224)
334 d2pl1a1 c.23.1.1 (A:1-119) Pho 50.1 22 0.0016 23.4 6.2 70 112-184 45-117 (119)
335 d2huec1 a.22.1.1 (C:20-101) Hi 49.9 11 0.00077 23.5 4.1 52 182-233 18-72 (82)
336 d1jbea_ c.23.1.1 (A:) CheY pro 48.5 24 0.0018 23.5 6.4 75 111-187 49-127 (128)
337 d1wxqa1 c.37.1.8 (A:1-319) GTP 48.0 3.2 0.00023 33.4 1.6 21 49-69 3-23 (319)
338 d1p3da1 c.5.1.1 (A:11-106) UDP 47.9 11 0.0008 24.1 4.1 25 46-70 8-32 (96)
339 d1peya_ c.23.1.1 (A:) Sporulat 47.4 27 0.002 22.9 6.4 68 112-182 46-116 (119)
340 d1kk1a3 c.37.1.8 (A:6-200) Ini 46.4 46 0.0033 23.7 9.8 20 49-68 8-27 (195)
341 d1fada_ a.77.1.2 (A:) FADD (Mo 45.0 32 0.0023 21.5 6.8 49 169-217 3-61 (95)
342 d1vg5a_ a.5.2.1 (A:) Rhomboid 44.1 22 0.0016 21.4 4.8 25 189-213 40-64 (73)
343 d1wgla_ a.5.2.4 (A:) Toll-inte 42.4 13 0.00092 21.5 3.2 39 174-216 11-49 (59)
344 d1jala1 c.37.1.8 (A:1-278) Ych 39.7 8.1 0.00059 30.2 2.8 21 49-69 5-25 (278)
345 d1yioa2 c.23.1.1 (A:3-130) Res 39.0 48 0.0035 21.8 8.6 73 110-184 45-119 (128)
346 d2axpa1 c.37.1.1 (A:2-165) Hyp 38.7 24 0.0017 23.0 4.5 28 49-81 3-30 (164)
347 d1zesa1 c.23.1.1 (A:3-123) Pho 38.4 43 0.0031 21.8 6.3 71 111-184 44-119 (121)
348 d1htaa_ a.22.1.2 (A:) Archaeal 35.6 38 0.0027 19.7 5.8 60 170-232 4-65 (68)
349 d1mvoa_ c.23.1.1 (A:) PhoP rec 35.0 54 0.0039 21.3 8.1 70 112-184 47-119 (121)
350 d1wgna_ a.5.2.1 (A:) Ubiquitin 34.9 25 0.0018 20.4 3.8 26 189-214 30-55 (63)
351 d1vdma1 c.61.1.1 (A:1-153) Ppr 33.5 48 0.0035 22.8 6.1 98 33-140 14-111 (153)
352 d1f60a3 c.37.1.8 (A:2-240) Elo 33.5 14 0.001 28.2 3.2 22 49-70 9-30 (239)
353 g1xew.1 c.37.1.12 (X:,Y:) Smc 33.2 29 0.0021 27.2 5.4 42 110-151 245-287 (329)
354 d1p6qa_ c.23.1.1 (A:) CheY pro 32.2 34 0.0025 22.7 4.9 70 112-184 52-126 (129)
355 d2r25b1 c.23.1.1 (B:1087-1214) 32.1 51 0.0037 21.8 5.8 71 111-184 51-125 (128)
356 d1r5ba3 c.37.1.8 (A:215-459) E 31.3 12 0.0009 28.6 2.6 22 49-70 27-48 (245)
357 d1ns5a_ c.116.1.3 (A:) Hypothe 31.1 75 0.0055 21.8 7.3 59 112-172 67-127 (153)
358 d1xhfa1 c.23.1.1 (A:2-122) Aer 30.9 47 0.0034 21.6 5.4 69 112-184 47-118 (121)
359 d1wiva_ a.5.2.1 (A:) Ubiquitin 30.9 50 0.0036 19.7 6.1 40 169-215 27-66 (73)
360 d2a9pa1 c.23.1.1 (A:2-118) DNA 30.9 30 0.0022 22.6 4.3 70 112-184 45-116 (117)
361 d1mn3a_ a.5.2.4 (A:) Vacuolar 30.6 42 0.0031 18.7 5.4 27 189-215 25-51 (54)
362 d1ufra_ c.61.1.1 (A:) Pyrimidi 30.4 76 0.0055 22.4 6.9 28 109-137 94-121 (178)
363 d1mb3a_ c.23.1.1 (A:) Cell div 30.3 60 0.0043 21.1 5.9 71 112-184 46-120 (123)
364 d2ayxa1 c.23.1.1 (A:817-949) S 30.3 27 0.002 23.5 4.1 70 112-184 53-125 (133)
365 d1zh2a1 c.23.1.1 (A:2-120) Tra 29.9 35 0.0026 22.2 4.6 71 112-185 45-117 (119)
366 d2vgna2 c.55.4.2 (A:136-277) D 29.1 78 0.0057 21.5 6.4 26 44-70 71-96 (142)
367 d2vvpa1 c.121.1.1 (A:3-158) Al 28.0 89 0.0065 21.7 6.6 75 29-105 43-130 (156)
368 d1o6da_ c.116.1.3 (A:) Hypothe 27.5 86 0.0063 21.3 14.0 117 49-172 5-124 (147)
369 d1vkja_ c.37.1.5 (A:) Heparan 27.1 12 0.00089 28.3 1.8 25 44-68 3-27 (258)
370 d2daha1 a.5.2.1 (A:8-48) Ubiqu 25.3 46 0.0033 17.4 4.7 30 185-215 11-40 (41)
371 d1wjia_ a.5.2.1 (A:) Tudor dom 25.2 59 0.0043 18.6 4.9 27 189-215 20-46 (63)
372 d1rw1a_ c.47.1.12 (A:) Hypothe 25.0 41 0.003 21.8 4.1 46 49-100 2-49 (114)
373 d1j6ua3 c.72.2.1 (A:89-295) UD 24.8 44 0.0032 24.1 4.7 35 36-72 4-38 (207)
374 d1gg4a1 c.59.1.1 (A:313-447) U 23.9 57 0.0041 21.9 4.8 30 89-124 24-53 (135)
375 d1w25a2 c.23.1.1 (A:141-293) R 23.9 81 0.0059 21.5 5.8 71 111-183 55-129 (153)
376 d1h3oa_ a.22.1.3 (A:) TAF(II)- 23.8 36 0.0026 18.6 2.8 44 170-216 3-47 (50)
377 d2djia1 c.31.1.3 (A:187-363) P 23.6 77 0.0056 22.2 5.8 46 29-80 6-51 (177)
378 d1o1xa_ c.121.1.1 (A:) Putativ 22.5 1.1E+02 0.0081 20.8 8.3 75 29-105 43-130 (145)
379 d1oqya1 a.5.2.1 (A:160-200) DN 22.4 29 0.0021 18.1 2.2 25 189-213 15-39 (41)
380 d1w36b1 c.37.1.19 (B:1-485) Ex 21.9 25 0.0018 29.1 3.1 43 111-154 377-419 (485)
381 d1texa_ c.37.1.5 (A:) Stf0 sul 21.9 35 0.0025 24.8 3.7 25 45-69 2-26 (265)
382 d1veja1 a.5.2.1 (A:8-68) 49314 21.5 72 0.0052 18.3 4.7 28 185-213 31-58 (61)
383 d1fova_ c.47.1.1 (A:) Glutared 21.1 80 0.0058 18.7 5.4 35 48-87 2-36 (82)
384 d1zgza1 c.23.1.1 (A:2-121) Tor 21.0 1E+02 0.0073 19.7 5.7 70 112-185 46-118 (120)
385 d2a6na1 c.1.10.1 (A:1-292) Dih 21.0 1.6E+02 0.012 22.2 12.5 172 85-262 16-236 (292)
386 d2bwba1 a.5.2.1 (A:328-371) DS 20.8 61 0.0044 17.2 5.7 28 185-213 14-41 (44)
387 d2g3qa1 a.5.2.1 (A:1339-1381) 20.6 60 0.0043 17.0 3.9 27 187-213 13-39 (43)
388 d1kjwa2 c.37.1.1 (A:526-724) G 20.6 30 0.0022 25.2 2.9 20 49-71 12-31 (199)
389 d1j6ua1 c.5.1.1 (A:0-88) UDP-N 20.4 33 0.0024 21.4 2.6 21 49-69 4-24 (89)
No 1
>d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=1.3e-43 Score=297.07 Aligned_cols=222 Identities=68% Similarity=1.093 Sum_probs=207.8
Q ss_pred CCCchhhhcCCCCCCccccCHHHHHHHHHHHHcCCCCeEEEeCCCCccHHHHHHHHHHHhcCCCCCCceEEeecCCCCCh
Q 020071 11 YDIPWVEKYRPTKVCDIVGNLDAVARLGIIARDGNMPNLILAGPPGTGKTTSILALAHELLGPNYREAVMELNASDDRGI 90 (331)
Q Consensus 11 ~~~~~~~~~~p~~~~~~ig~~~~~~~l~~~l~~~~~~~~ll~G~~G~GKt~la~~l~~~l~~~~~~~~~~~~~~~~~~~~ 90 (331)
|++||++||||++|+|++||++.++.|..+++++..||++||||+|+|||++|+.+++++.++.....++++++.+..+.
T Consensus 1 ~~~pw~eKyrP~~~~d~ig~~~~~~~L~~~~~~~~~~~~ll~Gp~G~GKTt~a~~la~~l~~~~~~~~~~~~n~~~~~~~ 80 (224)
T d1sxjb2 1 LQLPWVEKYRPQVLSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDRGI 80 (224)
T ss_dssp CCCCHHHHTCCSSGGGCCSCTHHHHHHHHHHHSCCCCCEEEECSTTSSHHHHHHHHHHHHHGGGHHHHEEEECTTSCCSH
T ss_pred CCCchHhHhCCCCHHHhcCCHHHHHHHHHHHHcCCCCeEEEECCCCCCchhhHHHHHHHHhccccccccccccccccCCc
Confidence 78999999999999999999999999999999999999999999999999999999999987766678899999999898
Q ss_pred HhHHHHHHHHHhcccCCCCCCceEEEEeCCCCCCHHHHHHHHHHHHHhcCCcEEEEeeCCCCCCChhhhcccceeeecCC
Q 020071 91 DVVRNKIKMFAQKKVTLPPGKHKVVVLDEADSMTAGAQQALRRTMEIYSNSTRFALACNVSSKIIEPIQSRCAIVRFSRL 170 (331)
Q Consensus 91 ~~i~~~i~~~~~~~~~~~~~~~~vviide~d~l~~~~~~~Ll~~le~~~~~~~~I~~~~~~~~l~~~l~sr~~~i~~~~~ 170 (331)
..+...+..+............+++|+||+|.++...+++|+..+++++..+++++++++..++.++++|||..+.|.|+
T Consensus 81 ~~i~~~~~~~~~~~~~~~~~~~kviiiDe~d~~~~~~~~~ll~~~e~~~~~~~~i~~~~~~~~i~~~l~sr~~~i~~~~~ 160 (224)
T d1sxjb2 81 DVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMTAGAQQALRRTMELYSNSTRFAFACNQSNKIIEPLQSQCAILRYSKL 160 (224)
T ss_dssp HHHHTHHHHHHHBCCCCCTTCCEEEEEESGGGSCHHHHHTTHHHHHHTTTTEEEEEEESCGGGSCHHHHTTSEEEECCCC
T ss_pred eehhhHHHHHHHhhccCCCcceEEEEEecccccchhHHHHHhhhccccccceeeeeccCchhhhhhHHHHHHHHhhhccc
Confidence 88888888888777666667889999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHhcCCCCCHHHHHHHHHhcCCCHHHHHHHHHHHhhCCCccchhhhhhhc
Q 020071 171 SDEEILSRLMVVVQEEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVC 232 (331)
Q Consensus 171 ~~~~~~~~l~~~~~~~~~~i~~~~~~~l~~~~~g~~r~~~~~l~~~~~~~~~i~~~~v~~~~ 232 (331)
+.+++..++..+++++++.+++++++.+++.++||+|.+++.||.+..+.+.|+.+.|.+++
T Consensus 161 ~~~~i~~~l~~i~~~e~~~i~~~~l~~I~~~s~Gd~R~ai~~Lq~~~~~~~~i~~~~i~~~~ 222 (224)
T d1sxjb2 161 SDEDVLKRLLQIIKLEDVKYTNDGLEAIIFTAEGDMRQAINNLQSTVAGHGLVNADNVFKIV 222 (224)
T ss_dssp CHHHHHHHHHHHHHHHTCCBCHHHHHHHHHHHTTCHHHHHHHHHHHHHHHSSBCHHHHHHHH
T ss_pred chhhhHHHHHHHHHhcccCCCHHHHHHHHHHcCCcHHHHHHHHHHHHHcCCCcCHHHHHHHh
Confidence 99999999999999999999999999999999999999999999887777788888777654
No 2
>d1sxjc2 c.37.1.20 (C:12-238) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=1.7e-40 Score=278.67 Aligned_cols=221 Identities=42% Similarity=0.727 Sum_probs=197.9
Q ss_pred CCchhhhcCCCCCCccccCHHHHHHHHHHHHcCCCCeEEEeCCCCccHHHHHHHHHHHhcCCCCCCceEEeecCCCCChH
Q 020071 12 DIPWVEKYRPTKVCDIVGNLDAVARLGIIARDGNMPNLILAGPPGTGKTTSILALAHELLGPNYREAVMELNASDDRGID 91 (331)
Q Consensus 12 ~~~~~~~~~p~~~~~~ig~~~~~~~l~~~l~~~~~~~~ll~G~~G~GKt~la~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 91 (331)
++||++||||++|+|++||+++++.|+.+++++..||+|||||+|+|||++|+.+++++.+..+...+.+++..+..+.+
T Consensus 1 ~~pw~ekyrP~~~~divg~~~~~~~L~~~i~~~~~~~lLl~Gp~G~GKttl~~~la~~l~~~~~~~~~~e~~~~~~~~~~ 80 (227)
T d1sxjc2 1 NLPWVEKYRPETLDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGID 80 (227)
T ss_dssp CCCHHHHTCCSSGGGCCSCHHHHHHHHHHHHTTCCCCEEEECSSSSSHHHHHHHHHHHHHTTSHHHHEEEECTTSCCSHH
T ss_pred CCchhhhhCCCCHHHccCcHHHHHHHHHHHHcCCCCeEEEECCCCCChhHHHHHHHHHhhcCCCcceeEEecccccCCee
Confidence 47999999999999999999999999999999999999999999999999999999999877766778888988887777
Q ss_pred hHHHHHHHHHhcccCCCCCCceEEEEeCCCCCCHHHHHHHHHHHHHhcCCcEEEEeeCCCCCCChhhhcccceeeecCCC
Q 020071 92 VVRNKIKMFAQKKVTLPPGKHKVVVLDEADSMTAGAQQALRRTMEIYSNSTRFALACNVSSKIIEPIQSRCAIVRFSRLS 171 (331)
Q Consensus 92 ~i~~~i~~~~~~~~~~~~~~~~vviide~d~l~~~~~~~Ll~~le~~~~~~~~I~~~~~~~~l~~~l~sr~~~i~~~~~~ 171 (331)
.............. ....+++++||||+|.++...+++|++.+++++.+++++++++...++.+++++||..+.|.|++
T Consensus 81 ~~~~~~~~~~~~~~-~~~~~~kiiiiDe~d~~~~~~~~~Ll~~le~~~~~~~~~~~~~~~~~i~~~i~sr~~~i~~~~~~ 159 (227)
T d1sxjc2 81 VVRNQIKDFASTRQ-IFSKGFKLIILDEADAMTNAAQNALRRVIERYTKNTRFCVLANYAHKLTPALLSQCTRFRFQPLP 159 (227)
T ss_dssp HHHTHHHHHHHBCC-SSSCSCEEEEETTGGGSCHHHHHHHHHHHHHTTTTEEEEEEESCGGGSCHHHHTTSEEEECCCCC
T ss_pred eeecchhhcccccc-ccCCCeEEEEEeccccchhhHHHHHHHHhhhcccceeeccccCcHHHhHHHHHHHHhhhcccccc
Confidence 66665555444332 22456789999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCHHHHHHHHHhcCCCHHHHHHHHHHHh-----hCCCccchhhhhhhcC
Q 020071 172 DEEILSRLMVVVQEEKVPYVPEGLEAIIFTADGDMRQALNNLQATY-----SGFRFVNQENVFKVCD 233 (331)
Q Consensus 172 ~~~~~~~l~~~~~~~~~~i~~~~~~~l~~~~~g~~r~~~~~l~~~~-----~~~~~i~~~~v~~~~~ 233 (331)
.+++..++.+++..+++.+++++++.|++.++||+|.+++.||.+. .+...||.++|.++++
T Consensus 160 ~~~i~~~l~~I~~~e~i~i~~~~l~~i~~~s~Gd~R~ain~Lq~~~~~~~~~~~~~It~~~v~e~~g 226 (227)
T d1sxjc2 160 QEAIERRIANVLVHEKLKLSPNAEKALIELSNGDMRRVLNVLQSCKATLDNPDEDEISDDVIYECCG 226 (227)
T ss_dssp HHHHHHHHHHHHHTTTCCBCHHHHHHHHHHHTTCHHHHHHHTTTTTTTTCSSSCCCBCHHHHHHHTT
T ss_pred ccccccccccccccccccCCHHHHHHHHHHcCCcHHHHHHHHHHHHHhcCCCCCCeeCHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999764 2346788888888765
No 3
>d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=3.7e-40 Score=278.28 Aligned_cols=216 Identities=25% Similarity=0.341 Sum_probs=195.9
Q ss_pred hhhhcCCCCCCccccCHHHHHHHHHHHHcCCCCe-EEEeCCCCccHHHHHHHHHHHhcCCCC------------------
Q 020071 15 WVEKYRPTKVCDIVGNLDAVARLGIIARDGNMPN-LILAGPPGTGKTTSILALAHELLGPNY------------------ 75 (331)
Q Consensus 15 ~~~~~~p~~~~~~ig~~~~~~~l~~~l~~~~~~~-~ll~G~~G~GKt~la~~l~~~l~~~~~------------------ 75 (331)
+++||||++|+|++||++.++.|..++.+++.|| +|||||+|+|||++|+.+++.+.+...
T Consensus 2 ~~~KyrP~~~~dlig~~~~~~~L~~~i~~~~~~~~~Ll~Gp~G~GKtt~a~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~ 81 (239)
T d1njfa_ 2 LARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQG 81 (239)
T ss_dssp HHHHTCCSSGGGSCSCHHHHHHHHHHHHTTCCCSEEEEECSTTSSHHHHHHHHHHHHHCTTCSCSSCCSCSHHHHHHHHT
T ss_pred chhhhCCCCHHHccChHHHHHHHHHHHHcCCCCeeEEEECCCCCcHHHHHHHHHHHhcCccccccCccccchHHHHHHcC
Confidence 6899999999999999999999999999999999 899999999999999999999876431
Q ss_pred -CCceEEeecCCCCChHhHHHHHHHHHhcccCCCCCCceEEEEeCCCCCCHHHHHHHHHHHHHhcCCcEEEEeeCCCCCC
Q 020071 76 -REAVMELNASDDRGIDVVRNKIKMFAQKKVTLPPGKHKVVVLDEADSMTAGAQQALRRTMEIYSNSTRFALACNVSSKI 154 (331)
Q Consensus 76 -~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~vviide~d~l~~~~~~~Ll~~le~~~~~~~~I~~~~~~~~l 154 (331)
..++++++..+..+++.+++.++.+...+. .++++++||||+|.|+.+++++|+++||+|+.+++||++|++..++
T Consensus 82 ~~~~~~~~~~~~~~~i~~ir~~~~~~~~~~~---~~~~kviiIde~d~l~~~~q~~Llk~lE~~~~~~~~il~tn~~~~i 158 (239)
T d1njfa_ 82 RFVDLIEIDAASRTKVEDTRDLLDNVQYAPA---RGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKL 158 (239)
T ss_dssp CCTTEEEEETTCSSSHHHHHHHHHSCCCSCS---SSSSEEEEEETGGGSCHHHHHHHHHHHHSCCTTEEEEEEESCGGGS
T ss_pred CCCeEEEecchhcCCHHHHHHHHHHHHhccc---cCCCEEEEEECcccCCHHHHHHHHHHHhcCCCCeEEEEEcCCcccc
Confidence 124678888877788888888777665554 6778999999999999999999999999999999999999999999
Q ss_pred ChhhhcccceeeecCCCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHhcCCCHHHHHHHHHHH-hhCCCccchhhhhhhcC
Q 020071 155 IEPIQSRCAIVRFSRLSDEEILSRLMVVVQEEKVPYVPEGLEAIIFTADGDMRQALNNLQAT-YSGFRFVNQENVFKVCD 233 (331)
Q Consensus 155 ~~~l~sr~~~i~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~l~~~~~g~~r~~~~~l~~~-~~~~~~i~~~~v~~~~~ 233 (331)
.++++|||..+.|++++.+++..++..++..++..+++++++.|++.++||+|.+++.++.+ +.+.+.|+.++|.++++
T Consensus 159 ~~~i~SRc~~i~~~~~~~~~i~~~l~~i~~~e~~~~~~~~l~~i~~~s~Gd~R~ain~l~~~~~~~~~~I~~~~v~~~lg 238 (239)
T d1njfa_ 159 PVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLG 238 (239)
T ss_dssp CHHHHTTSEEEECCCCCHHHHHHHHHHHHHHHTCCBCHHHHHHHHHHTTTCHHHHHHHHHHHHHHTTTSBCHHHHHHHHT
T ss_pred ChhHhhhhcccccccCcHHHhhhHHHHHHhhhccCCCHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCCCcCHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999865 45677899999988764
No 4
>d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=100.00 E-value=7.5e-40 Score=275.42 Aligned_cols=224 Identities=53% Similarity=0.846 Sum_probs=201.4
Q ss_pred CCCCCCCchhhhcCCCCCCccccCHHHHHHHHHHHHcCCCCeEEEeCCCCccHHHHHHHHHHHhcCCCCCCceEEeecCC
Q 020071 7 SSSAYDIPWVEKYRPTKVCDIVGNLDAVARLGIIARDGNMPNLILAGPPGTGKTTSILALAHELLGPNYREAVMELNASD 86 (331)
Q Consensus 7 ~~~~~~~~~~~~~~p~~~~~~ig~~~~~~~l~~~l~~~~~~~~ll~G~~G~GKt~la~~l~~~l~~~~~~~~~~~~~~~~ 86 (331)
....+..||++||+|++|+|++||++.++.|..++++++.||++|+||+|+|||++|+.+++++.++....+++++++++
T Consensus 6 ~~~~~~~~w~~ky~P~~~~diig~~~~~~~l~~~i~~~~~~~lll~Gp~G~GKTtla~~iak~l~~~~~~~~~~e~n~s~ 85 (231)
T d1iqpa2 6 EVKVLEKPWVEKYRPQRLDDIVGQEHIVKRLKHYVKTGSMPHLLFAGPPGVGKTTAALALARELFGENWRHNFLELNASD 85 (231)
T ss_dssp HHHHTTSCHHHHTCCCSTTTCCSCHHHHHHHHHHHHHTCCCEEEEESCTTSSHHHHHHHHHHHHHGGGHHHHEEEEETTC
T ss_pred hhhhhhchHHHHhCCCCHHHccCcHHHHHHHHHHHHcCCCCeEEEECCCCCcHHHHHHHHHHHHHhcccCCCeeEEecCc
Confidence 34557789999999999999999999999999999999999999999999999999999999998877778899999988
Q ss_pred CCChHhHHHHHHHHHhcccCCCCCCceEEEEeCCCCCCHHHHHHHHHHHHHhcCCcEEEEeeCCCCCCChhhhcccceee
Q 020071 87 DRGIDVVRNKIKMFAQKKVTLPPGKHKVVVLDEADSMTAGAQQALRRTMEIYSNSTRFALACNVSSKIIEPIQSRCAIVR 166 (331)
Q Consensus 87 ~~~~~~i~~~i~~~~~~~~~~~~~~~~vviide~d~l~~~~~~~Ll~~le~~~~~~~~I~~~~~~~~l~~~l~sr~~~i~ 166 (331)
..+.+.+++........... .....+++++||+|.++...+++|+++++++..++.+|++++...++.+++++||..+.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~-~~~~~~iilide~d~~~~~~~~~ll~~l~~~~~~~~~i~~~n~~~~i~~~l~sR~~~i~ 164 (231)
T d1iqpa2 86 ERGINVIREKVKEFARTKPI-GGASFKIIFLDEADALTQDAQQALRRTMEMFSSNVRFILSCNYSSKIIEPIQSRCAIFR 164 (231)
T ss_dssp HHHHHTTHHHHHHHHHSCCG-GGCSCEEEEEETGGGSCHHHHHHHHHHHHHTTTTEEEEEEESCGGGSCHHHHHTEEEEE
T ss_pred ccchhHHHHHHHHHHhhhhc-cCCCceEEeehhhhhcchhHHHHHhhhcccCCcceEEEeccCChhhchHhHhCcccccc
Confidence 76666666665555443321 13467899999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHhcCCCHHHHHHHHHHHhhCCCccchhhhhhh
Q 020071 167 FSRLSDEEILSRLMVVVQEEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKV 231 (331)
Q Consensus 167 ~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~l~~~~~g~~r~~~~~l~~~~~~~~~i~~~~v~~~ 231 (331)
|.|++..++..+++..++++++.+++++++.|++.++||+|.+++.|+.+....+.++.++|..+
T Consensus 165 ~~~~~~~~~~~~l~~~~~~e~i~i~~~~l~~I~~~~~gdiR~ai~~Lq~~~~~~~~it~e~v~~v 229 (231)
T d1iqpa2 165 FRPLRDEDIAKRLRYIAENEGLELTEEGLQAILYIAEGDMRRAINILQAAAALDKKITDENVFMV 229 (231)
T ss_dssp CCCCCHHHHHHHHHHHHHTTTCEECHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSEECHHHHHHH
T ss_pred ccccchhhHHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCHHHHHHHHHHHHHcCCCcCHHHHHhh
Confidence 99999999999999999999999999999999999999999999999998877888998888765
No 5
>d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=5.2e-37 Score=258.89 Aligned_cols=220 Identities=43% Similarity=0.718 Sum_probs=189.6
Q ss_pred chhhhcCCCCCCccccCHHHHHHHHHHHHcCCCCeEEEeCCCCccHHHHHHHHHHHhcCCC-CCCceEEeecCCCCChHh
Q 020071 14 PWVEKYRPTKVCDIVGNLDAVARLGIIARDGNMPNLILAGPPGTGKTTSILALAHELLGPN-YREAVMELNASDDRGIDV 92 (331)
Q Consensus 14 ~~~~~~~p~~~~~~ig~~~~~~~l~~~l~~~~~~~~ll~G~~G~GKt~la~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~ 92 (331)
||++||||++|+|++||++.++.|+.+++++..||++|+||+|+|||++++.+++.+.+.. ......+++.....+...
T Consensus 1 ~w~~ky~P~~~~diig~~~~~~~l~~~i~~~~~~~lll~Gp~G~GKTtl~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~ 80 (237)
T d1sxjd2 1 PWVEKYRPKNLDEVTAQDHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISI 80 (237)
T ss_dssp CHHHHTCCSSTTTCCSCCTTHHHHHHHTTCTTCCCEEEECSTTSSHHHHHHHHHHHHHHHHHHTTSEEEECSSSCCCHHH
T ss_pred CcchhhCCCCHHHccCcHHHHHHHHHHHHcCCCCeEEEECCCCCChHHHHHHHHHHHcCCcccccchhheeccccccchH
Confidence 8999999999999999999999999999999999999999999999999999999975432 234567777777766665
Q ss_pred HHHHHHHHHhcccC---------CCCCCceEEEEeCCCCCCHHHHHHHHHHHHHhcCCcEEEEeeCCCCCCChhhhcccc
Q 020071 93 VRNKIKMFAQKKVT---------LPPGKHKVVVLDEADSMTAGAQQALRRTMEIYSNSTRFALACNVSSKIIEPIQSRCA 163 (331)
Q Consensus 93 i~~~i~~~~~~~~~---------~~~~~~~vviide~d~l~~~~~~~Ll~~le~~~~~~~~I~~~~~~~~l~~~l~sr~~ 163 (331)
....+......... .....++++||||+|.++...++.+++.++.++.++.+|++++...++++++++||.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~viiiDe~d~l~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~l~sr~~ 160 (237)
T d1sxjd2 81 VREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTADAQSALRRTMETYSGVTRFCLICNYVTRIIDPLASQCS 160 (237)
T ss_dssp HTTHHHHHHHSCCCCCCTTHHHHSCCCSCEEEEETTGGGSCHHHHHHHHHHHHHTTTTEEEEEEESCGGGSCHHHHHHSE
T ss_pred HHHHHHHHhhhhhhhhhHHHHhhccccCceEEEEecccccCHHHHHHHhhccccccccccccccccccccccccccchhh
Confidence 55555544332211 113467899999999999999999999999999999999999999999999999999
Q ss_pred eeeecCCCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHhcCCCHHHHHHHHHHHh------hCCCccchhhhhhhcC
Q 020071 164 IVRFSRLSDEEILSRLMVVVQEEKVPYVPEGLEAIIFTADGDMRQALNNLQATY------SGFRFVNQENVFKVCD 233 (331)
Q Consensus 164 ~i~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~l~~~~~g~~r~~~~~l~~~~------~~~~~i~~~~v~~~~~ 233 (331)
.+.|.|++.+++..+|..++.++++.+++++++.|++.++||+|.+++.|+.++ ...+.||.++|+++.+
T Consensus 161 ~i~f~~~~~~~~~~~L~~i~~~e~i~i~~~~l~~ia~~s~gd~R~ai~~L~~~~~~~~~~~~~~~It~~~i~e~~g 236 (237)
T d1sxjd2 161 KFRFKALDASNAIDRLRFISEQENVKCDDGVLERILDISAGDLRRGITLLQSASKGAQYLGDGKNITSTQVEELAG 236 (237)
T ss_dssp EEECCCCCHHHHHHHHHHHHHTTTCCCCHHHHHHHHHHTSSCHHHHHHHHHHTHHHHHHHCSCCCCCHHHHHHHHT
T ss_pred hhccccccccccchhhhhhhhhhcCcCCHHHHHHHHHHcCCCHHHHHHHHHHHHHhchhcCCCCccCHHHHHHhhC
Confidence 999999999999999999999999999999999999999999999999998653 3445688888887654
No 6
>d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=1e-32 Score=234.55 Aligned_cols=204 Identities=34% Similarity=0.526 Sum_probs=161.7
Q ss_pred hhhhcCCCCCCccccCHHHHHHHHHHHHcCC-CCeEEEeCCCCccHHHHHHHHHHHhcCCCCCC----------------
Q 020071 15 WVEKYRPTKVCDIVGNLDAVARLGIIARDGN-MPNLILAGPPGTGKTTSILALAHELLGPNYRE---------------- 77 (331)
Q Consensus 15 ~~~~~~p~~~~~~ig~~~~~~~l~~~l~~~~-~~~~ll~G~~G~GKt~la~~l~~~l~~~~~~~---------------- 77 (331)
|+|||||++|+|++|++++.+.|..++.++. .|+++||||+|+|||++|+++++.+.+.....
T Consensus 1 W~eky~P~~~~diig~~~~~~~L~~~~~~~~~~~~lll~Gp~G~GKTt~~~~la~~l~~~~~~~~~~~~~~~~~~~~~~~ 80 (252)
T d1sxje2 1 WVDKYRPKSLNALSHNEELTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVTASNRKL 80 (252)
T ss_dssp CTTTTCCCSGGGCCSCHHHHHHHHTTTTCTTCCCCEEEECSTTSSHHHHHHTHHHHHSCTTCCC----------------
T ss_pred CCcccCCCCHHHccCcHHHHHHHHHHHHcCCCCCeEEEECCCCCCHHHHHHHHHHhhcCccccccccccccccccccchh
Confidence 9999999999999999999999999998775 55699999999999999999999986432111
Q ss_pred --------ceEEeecCCC--CChHhHHHHHHHHHhccc-------CCCCCCceEEEEeCCCCCCHHHHHHHHHHHHHhcC
Q 020071 78 --------AVMELNASDD--RGIDVVRNKIKMFAQKKV-------TLPPGKHKVVVLDEADSMTAGAQQALRRTMEIYSN 140 (331)
Q Consensus 78 --------~~~~~~~~~~--~~~~~i~~~i~~~~~~~~-------~~~~~~~~vviide~d~l~~~~~~~Ll~~le~~~~ 140 (331)
....+...+. .......+.+........ ....+..++++|||+|.++...++.|++.+++++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iiiide~d~l~~~~~~~l~~~~e~~~~ 160 (252)
T d1sxje2 81 ELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVDFQDSKDGLAHRYKCVIINEANSLTKDAQAALRRTMEKYSK 160 (252)
T ss_dssp --CCEECSSEEEECCC----CCHHHHHHHHHHHTTTTC------------CCEEEEEECTTSSCHHHHHHHHHHHHHSTT
T ss_pred hhhhccCCccceeeecccccCCcceeeehhhhhhhhhhhhhhhcccccCCCceEEEeccccccccccchhhhcccccccc
Confidence 0111111111 111122233322221110 01134578999999999999999999999999999
Q ss_pred CcEEEEeeCCCCCCChhhhcccceeeecCCCHHHHHHHHHHHHHhcCCCCC-HHHHHHHHHhcCCCHHHHHHHHHHHhh
Q 020071 141 STRFALACNVSSKIIEPIQSRCAIVRFSRLSDEEILSRLMVVVQEEKVPYV-PEGLEAIIFTADGDMRQALNNLQATYS 218 (331)
Q Consensus 141 ~~~~I~~~~~~~~l~~~l~sr~~~i~~~~~~~~~~~~~l~~~~~~~~~~i~-~~~~~~l~~~~~g~~r~~~~~l~~~~~ 218 (331)
+++||++|++.++++++++|||..++|+|++.+++.+++..++.++++.++ +++++.|+..++||+|.+++.||.++.
T Consensus 161 ~~~~Il~tn~~~~i~~~l~sR~~~i~~~~~~~~~~~~~l~~i~~~e~~~~~~~~~l~~i~~~s~Gd~R~ai~~Lq~~~~ 239 (252)
T d1sxje2 161 NIRLIMVCDSMSPIIAPIKSQCLLIRCPAPSDSEISTILSDVVTNERIQLETKDILKRIAQASNGNLRVSLLMLESMAL 239 (252)
T ss_dssp TEEEEEEESCSCSSCHHHHTTSEEEECCCCCHHHHHHHHHHHHHHHTCEECCSHHHHHHHHHHTTCHHHHHHHHTHHHH
T ss_pred cccceeeeccccchhhhhhcchheeeecccchhhHHHHHHHHHHHcCCCCCcHHHHHHHHHHcCCcHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999998775 678899999999999999999997753
No 7
>d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=99.98 E-value=9.6e-32 Score=220.83 Aligned_cols=178 Identities=24% Similarity=0.287 Sum_probs=153.9
Q ss_pred cCHHHHHHHHHHHHcCCCCe-EEEeCCCCccHHHHHHHHHHHhcCCCC-------------------CCceEEeecCC--
Q 020071 29 GNLDAVARLGIIARDGNMPN-LILAGPPGTGKTTSILALAHELLGPNY-------------------REAVMELNASD-- 86 (331)
Q Consensus 29 g~~~~~~~l~~~l~~~~~~~-~ll~G~~G~GKt~la~~l~~~l~~~~~-------------------~~~~~~~~~~~-- 86 (331)
+|++..+.|.+.+.+++.|| +||+||+|+|||++|+.+++.+.|... ...+..+...+
T Consensus 6 w~~~~~~~l~~~~~~~~l~h~lLl~Gp~G~GKtt~a~~~a~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 85 (207)
T d1a5ta2 6 WLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGK 85 (207)
T ss_dssp GGHHHHHHHHHHHHTTCCCSEEEEECCTTSCHHHHHHHHHHHHTCSSCBTTBCCSCSHHHHHHHHTCCTTEEEECCCTTC
T ss_pred ccHHHHHHHHHHHHcCCcCeEEEEECCCCCcHHHHHHHHHHhcccccccccccccccchhhhhhhccccccchhhhhhcc
Confidence 34449999999999999999 899999999999999999999987532 22344443322
Q ss_pred -CCChHhHHHHHHHHHhcccCCCCCCceEEEEeCCCCCCHHHHHHHHHHHHHhcCCcEEEEeeCCCCCCChhhhccccee
Q 020071 87 -DRGIDVVRNKIKMFAQKKVTLPPGKHKVVVLDEADSMTAGAQQALRRTMEIYSNSTRFALACNVSSKIIEPIQSRCAIV 165 (331)
Q Consensus 87 -~~~~~~i~~~i~~~~~~~~~~~~~~~~vviide~d~l~~~~~~~Ll~~le~~~~~~~~I~~~~~~~~l~~~l~sr~~~i 165 (331)
....+++++.++.+...+. .++++++||||+|.++.+++++|+++||+|+.++.||++|++.+++.++|+|||+.+
T Consensus 86 ~~i~~~~ir~l~~~~~~~~~---~~~~kviIide~d~l~~~a~n~Llk~lEep~~~~~fIl~t~~~~~ll~tI~SRc~~i 162 (207)
T d1a5ta2 86 NTLGVDAVREVTEKLNEHAR---LGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLH 162 (207)
T ss_dssp SSBCHHHHHHHHHHTTSCCT---TSSCEEEEESCGGGBCHHHHHHHHHHHTSCCTTEEEEEEESCGGGSCHHHHTTSEEE
T ss_pred cccccchhhHHhhhhhhccc---cCccceEEechhhhhhhhhhHHHHHHHHhhcccceeeeeecChhhhhhhhcceeEEE
Confidence 3457788888877666654 678999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHhcCCCHHHHHHHHH
Q 020071 166 RFSRLSDEEILSRLMVVVQEEKVPYVPEGLEAIIFTADGDMRQALNNLQ 214 (331)
Q Consensus 166 ~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~l~~~~~g~~r~~~~~l~ 214 (331)
.|.|++.+++..+|.+ +..++++++..+++.++||+|.|++.+|
T Consensus 163 ~~~~~~~~~~~~~L~~-----~~~~~~~~~~~i~~~s~Gs~r~al~~le 206 (207)
T d1a5ta2 163 YLAPPPEQYAVTWLSR-----EVTMSQDALLAALRLSAGSPGAALALFQ 206 (207)
T ss_dssp ECCCCCHHHHHHHHHH-----HCCCCHHHHHHHHHHTTTCHHHHHHTTS
T ss_pred ecCCCCHHHHHHHHHH-----cCCCCHHHHHHHHHHcCCCHHHHHHHhC
Confidence 9999999999999965 4468999999999999999999998764
No 8
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.97 E-value=3.6e-31 Score=225.02 Aligned_cols=212 Identities=31% Similarity=0.486 Sum_probs=170.7
Q ss_pred chhhhcCCCCCCccccCHHHHHHHHHHHHc-----------------CCCCeEEEeCCCCccHHHHHHHHHHHhcCCCCC
Q 020071 14 PWVEKYRPTKVCDIVGNLDAVARLGIIARD-----------------GNMPNLILAGPPGTGKTTSILALAHELLGPNYR 76 (331)
Q Consensus 14 ~~~~~~~p~~~~~~ig~~~~~~~l~~~l~~-----------------~~~~~~ll~G~~G~GKt~la~~l~~~l~~~~~~ 76 (331)
.|++||||++|+|++|+++.++.|..++.. +..++++||||||+|||++|+++++.+ +
T Consensus 3 lW~eky~P~~~~dlig~~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~lll~GPpG~GKTt~a~~la~~~-----~ 77 (253)
T d1sxja2 3 LWTVKYAPTNLQQVCGNKGSVMKLKNWLANWENSKKNSFKHAGKDGSGVFRAAMLYGPPGIGKTTAAHLVAQEL-----G 77 (253)
T ss_dssp CHHHHTCCSSGGGCCSCHHHHHHHHHHHHTHHHHHHTTTCCCCTTSTTSCSEEEEECSTTSSHHHHHHHHHHHT-----T
T ss_pred ccccCcCCCCHHHhcCCHHHHHHHHHHHHhhhhcchhhhhhhcccCCCCCceEEEECCCCCCHHHHHHHHHHHH-----H
Confidence 599999999999999999999999998864 344569999999999999999999998 6
Q ss_pred CceEEeecCCCCChHhHHHHHHHHHhccc-----------CCCCCCceEEEEeCCCCCCHHHHHHHHHHHHHh-cCCcEE
Q 020071 77 EAVMELNASDDRGIDVVRNKIKMFAQKKV-----------TLPPGKHKVVVLDEADSMTAGAQQALRRTMEIY-SNSTRF 144 (331)
Q Consensus 77 ~~~~~~~~~~~~~~~~i~~~i~~~~~~~~-----------~~~~~~~~vviide~d~l~~~~~~~Ll~~le~~-~~~~~~ 144 (331)
.+++.++.++..+...++..+........ ....+...++++||++.++...+..+...++.. .....+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~ide~~~~~~~~~~~~~~~~~~~~~~~~~i 157 (253)
T d1sxja2 78 YDILEQNASDVRSKTLLNAGVKNALDNMSVVGYFKHNEEAQNLNGKHFVIIMDEVDGMSGGDRGGVGQLAQFCRKTSTPL 157 (253)
T ss_dssp CEEEEECTTSCCCHHHHHHTGGGGTTBCCSTTTTTC----CCSSTTSEEEEECSGGGCCTTSTTHHHHHHHHHHHCSSCE
T ss_pred hhhhccccccchhhHHHHHHHHHHhhcchhhhhhhhhhhcccccccceEEEeeeccccccchhhhhHHHhhhhccccccc
Confidence 67888888877666555554433222110 112346789999999999887777666666532 234456
Q ss_pred EEeeCC-CCCCChhhhcccceeeecCCCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHhcCCCHHHHHHHHHHHhhCCCcc
Q 020071 145 ALACNV-SSKIIEPIQSRCAIVRFSRLSDEEILSRLMVVVQEEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFRFV 223 (331)
Q Consensus 145 I~~~~~-~~~l~~~l~sr~~~i~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~l~~~~~g~~r~~~~~l~~~~~~~~~i 223 (331)
+++++. .....+.+++||..+.|.+|+.+++..+++.++.++++.+++++++.|++.++||+|.+++.|+.+....+.+
T Consensus 158 i~i~~~~~~~~~~~l~~~~~~i~f~~~~~~~i~~~l~~i~~~e~i~i~~~~l~~i~~~s~GDiR~ai~~L~~~~~~~~~i 237 (253)
T d1sxja2 158 ILICNERNLPKMRPFDRVCLDIQFRRPDANSIKSRLMTIAIREKFKLDPNVIDRLIQTTRGDIRQVINLLSTISTTTKTI 237 (253)
T ss_dssp EEEESCTTSSTTGGGTTTSEEEECCCCCHHHHHHHHHHHHHHHTCCCCTTHHHHHHHHTTTCHHHHHHHHTHHHHHSSCC
T ss_pred ccccccccccccccccceeeeeeccccchhHHHHHHHHHHHHhCCCCCHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCCC
Confidence 666654 4456778999999999999999999999999999999999999999999999999999999999887777778
Q ss_pred chhhhhh
Q 020071 224 NQENVFK 230 (331)
Q Consensus 224 ~~~~v~~ 230 (331)
+.+++.+
T Consensus 238 ~~~~~~~ 244 (253)
T d1sxja2 238 NHENINE 244 (253)
T ss_dssp CTTHHHH
T ss_pred CHHHHHH
Confidence 8776654
No 9
>d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]}
Probab=99.97 E-value=1.5e-28 Score=206.80 Aligned_cols=198 Identities=19% Similarity=0.243 Sum_probs=167.2
Q ss_pred cCCCCCCccccCHHHHHHHHHHHHc-----CCCCeEEEeCCCCccHHHHHHHHHHHhcCCCCCCceEEeecCCCCChHhH
Q 020071 19 YRPTKVCDIVGNLDAVARLGIIARD-----GNMPNLILAGPPGTGKTTSILALAHELLGPNYREAVMELNASDDRGIDVV 93 (331)
Q Consensus 19 ~~p~~~~~~ig~~~~~~~l~~~l~~-----~~~~~~ll~G~~G~GKt~la~~l~~~l~~~~~~~~~~~~~~~~~~~~~~i 93 (331)
.||++|+|++||+++++.|..++.. ...||+|||||||+|||++|+.+++++ +.++..+++.+......+
T Consensus 3 ~RP~~~~divGqe~~~~~l~~~i~~~~~~~~~~~~~L~~GPpGtGKT~lA~~la~~~-----~~~~~~~~~~~~~~~~~~ 77 (238)
T d1in4a2 3 LRPKSLDEFIGQENVKKKLSLALEAAKMRGEVLDHVLLAGPPGLGKTTLAHIIASEL-----QTNIHVTSGPVLVKQGDM 77 (238)
T ss_dssp TSCSSGGGCCSCHHHHHHHHHHHHHHHHHTCCCCCEEEESSTTSSHHHHHHHHHHHH-----TCCEEEEETTTCCSHHHH
T ss_pred CCCCcHHHcCChHHHHHHHHHHHHHHHhcCCCCCeEEEECCCCCcHHHHHHHHHhcc-----CCCcccccCcccccHHHH
Confidence 5999999999999999999888753 346789999999999999999999999 667888888887666655
Q ss_pred HHHHHHHHhcccCCCCCCceEEEEeCCCCCCHHHHHHHHHHHHHh------------------cCCcEEEEeeCCCCCCC
Q 020071 94 RNKIKMFAQKKVTLPPGKHKVVVLDEADSMTAGAQQALRRTMEIY------------------SNSTRFALACNVSSKII 155 (331)
Q Consensus 94 ~~~i~~~~~~~~~~~~~~~~vviide~d~l~~~~~~~Ll~~le~~------------------~~~~~~I~~~~~~~~l~ 155 (331)
...+.. ..++.++++||++.+.+..++.++..++.. ...+++|++|++...+.
T Consensus 78 ~~~~~~---------~~~~~~~~ide~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~at~~~~~~~ 148 (238)
T d1in4a2 78 AAILTS---------LERGDVLFIDEIHRLNKAVEELLYSAIEDFQIDIMIGKGPSAKSIRIDIQPFTLVGATTRSGLLS 148 (238)
T ss_dssp HHHHHH---------CCTTCEEEEETGGGCCHHHHHHHHHHHHTSCCCC---------------CCCEEEEEESCGGGSC
T ss_pred HHHHHh---------hccCCchHHHHHHHhhhHHHhhcccceeeeeeeeeecCcccccccccCCCCeEEEEecCCCcccc
Confidence 554432 345679999999999999999998888742 34678999999999999
Q ss_pred hhhhcccce-eeecCCCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHhcCCCHHHHHHHHHHHh-----hCCCccchhhhh
Q 020071 156 EPIQSRCAI-VRFSRLSDEEILSRLMVVVQEEKVPYVPEGLEAIIFTADGDMRQALNNLQATY-----SGFRFVNQENVF 229 (331)
Q Consensus 156 ~~l~sr~~~-i~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~l~~~~~g~~r~~~~~l~~~~-----~~~~~i~~~~v~ 229 (331)
+++++||.. +.|++++.+++..+++.++..++..+++++++.+++.++||+|.+++.++.+. .+...||.+.+.
T Consensus 149 ~~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~i~~~s~gd~R~ai~~l~~~~~~~~~~~~~~it~~~~~ 228 (238)
T d1in4a2 149 SPLRSRFGIILELDFYTVKELKEIIKRAASLMDVEIEDAAAEMIAKRSRGTPRIAIRLTKRVRDMLTVVKADRINTDIVL 228 (238)
T ss_dssp HHHHTTCSEEEECCCCCHHHHHHHHHHHHHHTTCCBCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHHTCSSBCHHHHH
T ss_pred ccceeeeeEEEEecCCCHHHHHHHHHHhhhhccchhhHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhcCCccCHHHHH
Confidence 999999865 69999999999999999999999999999999999999999999999998642 344567766555
Q ss_pred h
Q 020071 230 K 230 (331)
Q Consensus 230 ~ 230 (331)
+
T Consensus 229 ~ 229 (238)
T d1in4a2 229 K 229 (238)
T ss_dssp H
T ss_pred H
Confidence 4
No 10
>d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB {Thermus thermophilus [TaxId: 274]}
Probab=99.96 E-value=8.8e-28 Score=202.15 Aligned_cols=199 Identities=19% Similarity=0.210 Sum_probs=164.0
Q ss_pred cCCCCCCccccCHHHHHHHHHHHHc-----CCCCeEEEeCCCCccHHHHHHHHHHHhcCCCCCCceEEeecCCCCChHhH
Q 020071 19 YRPTKVCDIVGNLDAVARLGIIARD-----GNMPNLILAGPPGTGKTTSILALAHELLGPNYREAVMELNASDDRGIDVV 93 (331)
Q Consensus 19 ~~p~~~~~~ig~~~~~~~l~~~l~~-----~~~~~~ll~G~~G~GKt~la~~l~~~l~~~~~~~~~~~~~~~~~~~~~~i 93 (331)
.||++|+|++||+++++.|..++.. ...+|+|||||||+|||++|+.+++.+ ..++..+++.........
T Consensus 3 ~RP~~~ddivGq~~~~~~L~~~i~~~~~~~~~~~~~Ll~GPpG~GKTtla~~la~~~-----~~~~~~~~~~~~~~~~~~ 77 (239)
T d1ixsb2 3 LRPKTLDEYIGQERLKQKLRVYLEAAKARKEPLEHLLLFGPPGLGKTTLAHVIAHEL-----GVNLRVTSGPAIEKPGDL 77 (239)
T ss_dssp CCCCSGGGSCSCHHHHHHHHHHHHHHTTSSSCCCCEEEECCTTSCHHHHHHHHHHHH-----TCCEEEEETTTCCSHHHH
T ss_pred cCCCCHHHhCCHHHHHHHHHHHHHHHHhcCCCCCeEEEECCCCCCHHHHHHHHHHHh-----CCCeEeccCCccccchhh
Confidence 3899999999999999999988864 346779999999999999999999998 677888888776554444
Q ss_pred HHHHHHHHhcccCCCCCCceEEEEeCCCCCCHHHHHHHHHHHHHh------------------cCCcEEEEeeCCCC-CC
Q 020071 94 RNKIKMFAQKKVTLPPGKHKVVVLDEADSMTAGAQQALRRTMEIY------------------SNSTRFALACNVSS-KI 154 (331)
Q Consensus 94 ~~~i~~~~~~~~~~~~~~~~vviide~d~l~~~~~~~Ll~~le~~------------------~~~~~~I~~~~~~~-~l 154 (331)
...+.. . .....++++||+|.++...++.++..+++. ++++++|++|++.. ..
T Consensus 78 ~~~~~~----~----~~~~~i~~iDe~~~~~~~~~~~l~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 149 (239)
T d1ixsb2 78 AAILAN----S----LEEGDILFIDEIHRLSRQAEEHLYPAMEDFVMDIVIGQGPAARTIRLELPRFTLIGATTRPGLIT 149 (239)
T ss_dssp HHHHHT----T----CCTTCEEEEETGGGCCHHHHHHHHHHHHHSEEEEECSCTTCCCEEEEECCCCEEEEEESCCSSCS
T ss_pred HHHHHh----h----ccCCCeeeeecccccchhHHHhhhhhhhhhhhhhhhccchhhhhcccCCCCEEEEeeccCccccc
Confidence 433321 1 345679999999999999999999999852 34567888887765 45
Q ss_pred ChhhhcccceeeecCCCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHhcCCCHHHHHHHHHHHh-----hCCCccchhhhh
Q 020071 155 IEPIQSRCAIVRFSRLSDEEILSRLMVVVQEEKVPYVPEGLEAIIFTADGDMRQALNNLQATY-----SGFRFVNQENVF 229 (331)
Q Consensus 155 ~~~l~sr~~~i~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~l~~~~~g~~r~~~~~l~~~~-----~~~~~i~~~~v~ 229 (331)
.+.++++|..+.|.+++.+++..++...+..+++.++++.+..+++.++||+|.+++.++.+. .+...||.+.+.
T Consensus 150 ~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~~~l~~ia~~s~gd~R~a~~~l~~~~~~a~~~~~~~It~~~~~ 229 (239)
T d1ixsb2 150 APLLSRFGIVEHLEYYTPEELAQGVMRDARLLGVRITEEAALEIGRRSRGTMRVAKRLFRRVRDFAQVAGEEVITRERAL 229 (239)
T ss_dssp CGGGGGCSEEEECCCCCHHHHHHHHHHHHGGGCCCBCHHHHHHHHHHTTSSHHHHHHHHHHHHHHHTTSCCSCBCHHHHH
T ss_pred chhhcccceeeEeeccChhhhhHHHHHHHHHhCCccchHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhCCCCcCHHHHH
Confidence 577778899999999999999999999999999999999999999999999999999998653 344567776665
Q ss_pred h
Q 020071 230 K 230 (331)
Q Consensus 230 ~ 230 (331)
+
T Consensus 230 ~ 230 (239)
T d1ixsb2 230 E 230 (239)
T ss_dssp H
T ss_pred H
Confidence 4
No 11
>d2gnoa2 c.37.1.20 (A:11-208) gamma subunit of DNA polymerase III, N-domain {Thermotoga maritima [TaxId: 2336]}
Probab=99.93 E-value=8.8e-26 Score=183.01 Aligned_cols=137 Identities=17% Similarity=0.165 Sum_probs=121.1
Q ss_pred HHHHHHHHHHcCCCCeEEEeCCCCccHHHHHHHHHHHhcCC-CCCCceEEeecCC-CCChHhHHHHHHHHHhcccCCCCC
Q 020071 33 AVARLGIIARDGNMPNLILAGPPGTGKTTSILALAHELLGP-NYREAVMELNASD-DRGIDVVRNKIKMFAQKKVTLPPG 110 (331)
Q Consensus 33 ~~~~l~~~l~~~~~~~~ll~G~~G~GKt~la~~l~~~l~~~-~~~~~~~~~~~~~-~~~~~~i~~~i~~~~~~~~~~~~~ 110 (331)
.++.+.++++++..++++|+||+|+|||++|..+++.+... ..+.+++.+++.. .++++++++..+.+...+. .+
T Consensus 2 ~~~~l~~~i~~~~~~~~l~~G~~g~gk~~~a~~l~~~i~~~~~~h~D~~~i~~~~~~I~Id~IR~i~~~~~~~~~---~~ 78 (198)
T d2gnoa2 2 QLETLKRIIEKSEGISILINGEDLSYPREVSLELPEYVEKFPPKASDVLEIDPEGENIGIDDIRTIKDFLNYSPE---LY 78 (198)
T ss_dssp HHHHHHHHHHTCSSEEEEEECSSSSHHHHHHHHHHHHHHTSCCCTTTEEEECCSSSCBCHHHHHHHHHHHTSCCS---SS
T ss_pred HHHHHHHHHhcCCCceEEEECCCCCCHHHHHHHHHHHHhccccCCCCEEEEeCCcCCCCHHHHHHHHHHHhhCcc---cC
Confidence 46788999999998889999999999999999999987543 3346788887643 4689999998888877775 68
Q ss_pred CceEEEEeCCCCCCHHHHHHHHHHHHHhcCCcEEEEeeCCCCCCChhhhcccceeeecCCCH
Q 020071 111 KHKVVVLDEADSMTAGAQQALRRTMEIYSNSTRFALACNVSSKIIEPIQSRCAIVRFSRLSD 172 (331)
Q Consensus 111 ~~~vviide~d~l~~~~~~~Ll~~le~~~~~~~~I~~~~~~~~l~~~l~sr~~~i~~~~~~~ 172 (331)
+++|+||||+|.|+.+++|+|+++||+||.+++||++|+++.++++|++|||+.+.|+++.+
T Consensus 79 ~~KviIId~ad~l~~~aqNaLLK~LEEPp~~t~fiLit~~~~~ll~TI~SRC~~i~~~~p~~ 140 (198)
T d2gnoa2 79 TRKYVIVHDCERMTQQAANAFLKALEEPPEYAVIVLNTRRWHYLLPTIKSRVFRVVVNVPKE 140 (198)
T ss_dssp SSEEEEETTGGGBCHHHHHHTHHHHHSCCTTEEEEEEESCGGGSCHHHHTTSEEEECCCCHH
T ss_pred CCEEEEEeCccccchhhhhHHHHHHhCCCCCceeeeccCChhhCHHHHhcceEEEeCCCchH
Confidence 89999999999999999999999999999999999999999999999999999999987753
No 12
>d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Thermus thermophilus [TaxId: 274]}
Probab=99.86 E-value=3.3e-21 Score=161.20 Aligned_cols=198 Identities=20% Similarity=0.225 Sum_probs=138.1
Q ss_pred CCCCccccCHHHHHHHHHHHH---------c-C-CCC-eEEEeCCCCccHHHHHHHHHHHhcCCCCCCceEEeecCCCCC
Q 020071 22 TKVCDIVGNLDAVARLGIIAR---------D-G-NMP-NLILAGPPGTGKTTSILALAHELLGPNYREAVMELNASDDRG 89 (331)
Q Consensus 22 ~~~~~~ig~~~~~~~l~~~l~---------~-~-~~~-~~ll~G~~G~GKt~la~~l~~~l~~~~~~~~~~~~~~~~~~~ 89 (331)
.+|+|++|.+.+++.|.+.+. + | ..| ++||+||||||||++|+++++.+ +.+++.+++++..+
T Consensus 6 ~~~~di~G~~~~k~~l~~~i~~l~~~~~~~~~g~~~~~giLl~GppGtGKT~la~aia~~~-----~~~~~~i~~~~l~~ 80 (247)
T d1ixza_ 6 VTFKDVAGAEEAKEELKEIVEFLKNPSRFHEMGARIPKGVLLVGPPGVGKTHLARAVAGEA-----RVPFITASGSDFVE 80 (247)
T ss_dssp CCGGGCCSCHHHHHHHHHHHHHHHCHHHHHHTTCCCCSEEEEECCTTSSHHHHHHHHHHHT-----TCCEEEEEHHHHHH
T ss_pred CcHHHHccHHHHHHHHHHHHHHHHCHHHHHHcCCCCCceEEEecCCCCChhHHHHHHHHHc-----CCCEEEEEhHHhhh
Confidence 489999999999988766542 1 2 233 39999999999999999999998 67888888654311
Q ss_pred --h----HhHHHHHHHHHhcccCCCCCCceEEEEeCCCCCCH--------------HHHHHHHHHHHHh--cCCcEEEEe
Q 020071 90 --I----DVVRNKIKMFAQKKVTLPPGKHKVVVLDEADSMTA--------------GAQQALRRTMEIY--SNSTRFALA 147 (331)
Q Consensus 90 --~----~~i~~~i~~~~~~~~~~~~~~~~vviide~d~l~~--------------~~~~~Ll~~le~~--~~~~~~I~~ 147 (331)
. ..+++.++.+. ...+.||+|||+|.+.. ...+.|+..|+.. ..++.+|.+
T Consensus 81 ~~~g~~~~~l~~~f~~a~-------~~~p~Ii~iDeid~l~~~r~~~~~~~~~~~~~~~~~ll~~~d~~~~~~~vivi~t 153 (247)
T d1ixza_ 81 MFVGVGAARVRDLFETAK-------RHAPCIVFIDEIDAVGRKRGSGVGGGNDEREQTLNQLLVEMDGFEKDTAIVVMAA 153 (247)
T ss_dssp SCTTHHHHHHHHHHHHHT-------TSSSEEEEEETHHHHHC---------CHHHHHHHHHHHHHHHTCCTTCCEEEEEE
T ss_pred ccccHHHHHHHHHHHHHH-------HcCCEEEEEEChhhhCccCCCCCCCCcHHHHHHHHHHHHHhhCCCCCCCEEEEEe
Confidence 1 22333333322 23467999999986521 1345677777743 345677788
Q ss_pred eCCCCCCChhhhc--ccc-eeeecCCCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHhcCC-CHHHHHHHHHHH-----hh
Q 020071 148 CNVSSKIIEPIQS--RCA-IVRFSRLSDEEILSRLMVVVQEEKVPYVPEGLEAIIFTADG-DMRQALNNLQAT-----YS 218 (331)
Q Consensus 148 ~~~~~~l~~~l~s--r~~-~i~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~l~~~~~g-~~r~~~~~l~~~-----~~ 218 (331)
||.++.+.+++++ |+. .+.|++|+.++..++++..+.+.... ++..+..+++.+.| +.+.+.+.++.+ ..
T Consensus 154 Tn~~~~ld~al~R~~Rf~~~i~~~~P~~~eR~~il~~~l~~~~~~-~~~~~~~la~~t~g~s~~di~~lv~~A~l~a~~~ 232 (247)
T d1ixza_ 154 TNRPDILDPALLRPGRFDRQIAIDAPDVKGREQILRIHARGKPLA-EDVDLALLAKRTPGFVGADLENLLNEAALLAARE 232 (247)
T ss_dssp ESCGGGSCGGGGSTTSSCEEEECCSCCHHHHHHHHHHHHTTSCBC-TTCCHHHHHHTCTTCCHHHHHHHHHHHHHHHHHT
T ss_pred CCCccccCHhHcCCCCCcEEEEECCcCHHHHHHHHHHHhcccCCc-cccCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHc
Confidence 9999999999984 774 78999999999999999887665433 33347888988876 334444444322 24
Q ss_pred CCCccchhhhhhhc
Q 020071 219 GFRFVNQENVFKVC 232 (331)
Q Consensus 219 ~~~~i~~~~v~~~~ 232 (331)
+...|+.+++.+++
T Consensus 233 ~~~~i~~~d~~~A~ 246 (247)
T d1ixza_ 233 GRRKITMKDLEEAA 246 (247)
T ss_dssp TCSSBCHHHHHHHT
T ss_pred CCCCcCHHHHHHhh
Confidence 55678888877643
No 13
>d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]}
Probab=99.86 E-value=1.2e-20 Score=158.40 Aligned_cols=197 Identities=19% Similarity=0.200 Sum_probs=141.8
Q ss_pred CCCCCccccCHHHHHHHHHHHHc-----------CCCC-eEEEeCCCCccHHHHHHHHHHHhcCCCCCCceEEeecCCCC
Q 020071 21 PTKVCDIVGNLDAVARLGIIARD-----------GNMP-NLILAGPPGTGKTTSILALAHELLGPNYREAVMELNASDDR 88 (331)
Q Consensus 21 p~~~~~~ig~~~~~~~l~~~l~~-----------~~~~-~~ll~G~~G~GKt~la~~l~~~l~~~~~~~~~~~~~~~~~~ 88 (331)
+.+|+|++|.+..++.+.+.+.- ...| ++|||||||||||++|+++++.+ +.+++.+++++..
T Consensus 8 ~~t~~Di~Gl~~~k~~l~e~v~~~~~~~~~~~~g~~~~~~iLL~GppGtGKT~la~~iA~~~-----~~~~~~i~~~~l~ 82 (256)
T d1lv7a_ 8 KTTFADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEA-----KVPFFTISGSDFV 82 (256)
T ss_dssp CCCGGGSCSCHHHHHHTHHHHHHHHCGGGC-----CCCCEEEEECCTTSCHHHHHHHHHHHH-----TCCEEEECSCSST
T ss_pred CCCHHHHhchHHHHHHHHHHHHHHHCHHHHHHcCCCCCCeEEeeCCCCCCccHHHHHHHHHc-----CCCEEEEEhHHhh
Confidence 45899999999999988766531 2233 39999999999999999999999 7888998887653
Q ss_pred C------hHhHHHHHHHHHhcccCCCCCCceEEEEeCCCCCCH--------------HHHHHHHHHHHHh--cCCcEEEE
Q 020071 89 G------IDVVRNKIKMFAQKKVTLPPGKHKVVVLDEADSMTA--------------GAQQALRRTMEIY--SNSTRFAL 146 (331)
Q Consensus 89 ~------~~~i~~~i~~~~~~~~~~~~~~~~vviide~d~l~~--------------~~~~~Ll~~le~~--~~~~~~I~ 146 (331)
+ ...+++.++.+.. ..+.|++|||+|.+.. ...+.|+..++.. ..++.+|.
T Consensus 83 ~~~~g~~~~~l~~~f~~A~~-------~~P~il~iDeiD~l~~~r~~~~~~~~~~~~~~~~~ll~~~d~~~~~~~v~vIa 155 (256)
T d1lv7a_ 83 EMFVGVGASRVRDMFEQAKK-------AAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIA 155 (256)
T ss_dssp TSCCCCCHHHHHHHHHHHHT-------TCSEEEEETTHHHHTCCCSTTSCCTTCHHHHHHHHHHHHHHTCCSSSCEEEEE
T ss_pred hcchhHHHHHHHHHHHHHHH-------cCCEEEEEEChhhhCccCCCCCCCCcHHHHHHHHHHHHHhhCCCCCCCEEEEE
Confidence 2 2345555554432 3367999999986521 1345677777743 34577888
Q ss_pred eeCCCCCCChhhhc--cc-ceeeecCCCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHhcCC-CHHHHHHHHHHH-----h
Q 020071 147 ACNVSSKIIEPIQS--RC-AIVRFSRLSDEEILSRLMVVVQEEKVPYVPEGLEAIIFTADG-DMRQALNNLQAT-----Y 217 (331)
Q Consensus 147 ~~~~~~~l~~~l~s--r~-~~i~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~l~~~~~g-~~r~~~~~l~~~-----~ 217 (331)
+||.++.+.+++++ |+ ..+.|++|+.++..++++....+.++. ++..+..+++.+.| +.+.+.+.++.+ .
T Consensus 156 tTn~~~~ld~al~R~gRfd~~i~i~~P~~~~R~~il~~~l~~~~~~-~~~~~~~la~~t~G~s~adi~~l~~~A~~~a~~ 234 (256)
T d1lv7a_ 156 ATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLA-PDIDAAIIARGTPGFSGADLANLVNEAALFAAR 234 (256)
T ss_dssp EESCTTTSCGGGGSTTSSCEEEECCCCCHHHHHHHHHHHHTTSCBC-TTCCHHHHHHTCTTCCHHHHHHHHHHHHHHHHH
T ss_pred eCCCcccCCHhHcCCCCCCEEEECCCcCHHHHHHHHHHhccCCCcC-cccCHHHHHHhCCCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999985 77 578999999999999998887665544 34457788888765 445555555432 2
Q ss_pred hCCCccchhhhhh
Q 020071 218 SGFRFVNQENVFK 230 (331)
Q Consensus 218 ~~~~~i~~~~v~~ 230 (331)
.+...|+.+++.+
T Consensus 235 ~~~~~i~~~d~~~ 247 (256)
T d1lv7a_ 235 GNKRVVSMVEFEK 247 (256)
T ss_dssp TTCSSBCHHHHHH
T ss_pred cCCCccCHHHHHH
Confidence 4455577666654
No 14
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=99.82 E-value=3.8e-18 Score=145.14 Aligned_cols=211 Identities=18% Similarity=0.232 Sum_probs=150.0
Q ss_pred CCchhhhcCCCCCCccccCHHHHHHHHHHHHc------CCCCeEEEeCCCCccHHHHHHHHHHHhcCCCCCCceEEeecC
Q 020071 12 DIPWVEKYRPTKVCDIVGNLDAVARLGIIARD------GNMPNLILAGPPGTGKTTSILALAHELLGPNYREAVMELNAS 85 (331)
Q Consensus 12 ~~~~~~~~~p~~~~~~ig~~~~~~~l~~~l~~------~~~~~~ll~G~~G~GKt~la~~l~~~l~~~~~~~~~~~~~~~ 85 (331)
..++...|+|.. ++|++..++.+..++.. +..++++|+||||+|||++++.+++.+.+.. ...++.+++.
T Consensus 6 ~~~l~~~y~p~~---l~~Re~ei~~l~~~l~~~l~~~~~~~~~lll~GppGtGKT~l~~~l~~~l~~~~-~~~~~~~~~~ 81 (276)
T d1fnna2 6 DSVFSPSYVPKR---LPHREQQLQQLDILLGNWLRNPGHHYPRATLLGRPGTGKTVTLRKLWELYKDKT-TARFVYINGF 81 (276)
T ss_dssp GGGGSTTCCCSC---CTTCHHHHHHHHHHHHHHHHSTTSSCCEEEEECCTTSSHHHHHHHHHHHHTTSC-CCEEEEEETT
T ss_pred cccCCCCCCCCC---CCCHHHHHHHHHHHHHHHHhCCCCCCCceEEECCCCCCHHHHHHHHHHHHhccc-CCcEEEecch
Confidence 346788898865 58999998888888753 2345699999999999999999999986432 3345555544
Q ss_pred CCCChH----------------------hHHHHHHHHHhcccCCCCCCceEEEEeCCCCCCHHHHHHHHHHHHH----hc
Q 020071 86 DDRGID----------------------VVRNKIKMFAQKKVTLPPGKHKVVVLDEADSMTAGAQQALRRTMEI----YS 139 (331)
Q Consensus 86 ~~~~~~----------------------~i~~~i~~~~~~~~~~~~~~~~vviide~d~l~~~~~~~Ll~~le~----~~ 139 (331)
...... .....+...... .....+.++|+++.+.....+.+...++. ..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 156 (276)
T d1fnna2 82 IYRNFTAIIGEIARSLNIPFPRRGLSRDEFLALLVEHLRE-----RDLYMFLVLDDAFNLAPDILSTFIRLGQEADKLGA 156 (276)
T ss_dssp TCCSHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHH-----TTCCEEEEEETGGGSCHHHHHHHHHHTTCHHHHSS
T ss_pred hhhhhhhhhhhhHHhhhhhhhhhccchhHHHHHHHHHHhh-----cccccccchhHHHHhhhhhhhhHHHHHhccccccc
Confidence 322111 111111111111 23467888999999988777766655542 23
Q ss_pred CCcEEEEeeCCC---CCCChhhhccc--ceeeecCCCHHHHHHHHHHHHHh--cCCCCCHHHHHHHHHhc---------C
Q 020071 140 NSTRFALACNVS---SKIIEPIQSRC--AIVRFSRLSDEEILSRLMVVVQE--EKVPYVPEGLEAIIFTA---------D 203 (331)
Q Consensus 140 ~~~~~I~~~~~~---~~l~~~l~sr~--~~i~~~~~~~~~~~~~l~~~~~~--~~~~i~~~~~~~l~~~~---------~ 203 (331)
..+.+|++++.. ..+.+.+.+|+ ..+.|+|++.+++.+++.++++. ....+++++++.+++.+ +
T Consensus 157 ~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~i~~~~~~~~e~~~il~~r~~~~~~~~~~~~~~l~~ia~~~~~~~~~~~~~ 236 (276)
T d1fnna2 157 FRIALVIVGHNDAVLNNLDPSTRGIMGKYVIRFSPYTKDQIFDILLDRAKAGLAEGSYSEDILQMIADITGAQTPLDTNR 236 (276)
T ss_dssp CCEEEEEEESSTHHHHTSCHHHHHHHTTCEEECCCCBHHHHHHHHHHHHHHHBCTTSSCHHHHHHHHHHHSBSSTTCTTS
T ss_pred cceEEeecCCchhhhhhcchhhhhhhcchhccccchhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHhhhhhhhhhcC
Confidence 456777777764 46778888886 45899999999999999998876 34458999999998764 7
Q ss_pred CCHHHHHHHHHHHh-----hCCCccchhhhhhh
Q 020071 204 GDMRQALNNLQATY-----SGFRFVNQENVFKV 231 (331)
Q Consensus 204 g~~r~~~~~l~~~~-----~~~~~i~~~~v~~~ 231 (331)
||+|.+++.++.+. .+...|+.++|.+.
T Consensus 237 G~~R~a~~ll~~a~~~A~~~~~~~I~~edv~~A 269 (276)
T d1fnna2 237 GDARLAIDILYRSAYAAQQNGRKHIAPEDVRKS 269 (276)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHcCCCCcCHHHHHHH
Confidence 99999999997652 45667888888763
No 15
>d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.77 E-value=4.1e-18 Score=143.63 Aligned_cols=179 Identities=20% Similarity=0.216 Sum_probs=127.0
Q ss_pred CCCccccCHHHHHHHHHHHHc-----------C-CCCe-EEEeCCCCccHHHHHHHHHHHhcCCCCCCceEEeecCCCC-
Q 020071 23 KVCDIVGNLDAVARLGIIARD-----------G-NMPN-LILAGPPGTGKTTSILALAHELLGPNYREAVMELNASDDR- 88 (331)
Q Consensus 23 ~~~~~ig~~~~~~~l~~~l~~-----------~-~~~~-~ll~G~~G~GKt~la~~l~~~l~~~~~~~~~~~~~~~~~~- 88 (331)
.|+|+.|.+..++.+++.+.. | ..|. +|||||||||||++++++++.+ +.+++.+++++..
T Consensus 2 ~~~dv~G~~~~k~~l~~~i~~~l~~~~~~~~~g~~~~~giLL~GppGtGKT~l~~ala~~~-----~~~~~~i~~~~l~~ 76 (258)
T d1e32a2 2 GYDDVGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANET-----GAFFFLINGPEIMS 76 (258)
T ss_dssp CGGGCCSCSHHHHHHHHHHHHHHHCHHHHHHCCCCCCCEEEEECCTTSSHHHHHHHHHHHT-----TCEEEEECHHHHTT
T ss_pred ChhhhccHHHHHHHHHHHHHHHhcCHHHHHhCCCCCCceeEEecCCCCCchHHHHHHHHHh-----CCeEEEEEchhhcc
Confidence 689999999999998887431 3 2333 9999999999999999999998 7778888764321
Q ss_pred ---C--hHhHHHHHHHHHhcccCCCCCCceEEEEeCCCCCCHH-----------HHHHHHHHHH--HhcCCcEEEEeeCC
Q 020071 89 ---G--IDVVRNKIKMFAQKKVTLPPGKHKVVVLDEADSMTAG-----------AQQALRRTME--IYSNSTRFALACNV 150 (331)
Q Consensus 89 ---~--~~~i~~~i~~~~~~~~~~~~~~~~vviide~d~l~~~-----------~~~~Ll~~le--~~~~~~~~I~~~~~ 150 (331)
+ ...++..+..+.. ..+.|++|||+|.+... ....++..++ ....++.+|++||.
T Consensus 77 ~~~g~~~~~l~~~f~~A~~-------~~p~il~iDeid~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvi~tTn~ 149 (258)
T d1e32a2 77 KLAGESESNLRKAFEEAEK-------NAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNR 149 (258)
T ss_dssp SCTTHHHHHHHHHHHHHHH-------TCSEEEEESSGGGTCCHHHHCCCTTHHHHHHHHHHHHHTCCCSSCEEEEEEESC
T ss_pred cccccHHHHHHHHHHHHHh-------cCCeEEEehhhhhhccCCCCCCCchHHHHHHHhccccccccccCCccEEEeCCC
Confidence 1 2234444333332 23679999999998532 2334444444 23456778889999
Q ss_pred CCCCChhhhc--cc-ceeeecCCCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHhcCC-CHHHHHHHHH
Q 020071 151 SSKIIEPIQS--RC-AIVRFSRLSDEEILSRLMVVVQEEKVPYVPEGLEAIIFTADG-DMRQALNNLQ 214 (331)
Q Consensus 151 ~~~l~~~l~s--r~-~~i~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~l~~~~~g-~~r~~~~~l~ 214 (331)
+..+.+++++ |+ ..+.|++|+.++...+++..+++..+. ++..++.|++.+.| +.+.+.+.++
T Consensus 150 ~~~ld~al~r~gRfd~~i~~~~P~~~~R~~il~~~l~~~~~~-~~~~~~~la~~t~G~s~adl~~lv~ 216 (258)
T d1e32a2 150 PNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLA-DDVDLEQVANETHGHVGADLAALCS 216 (258)
T ss_dssp GGGSCGGGTSTTSSCEEEECCCCCHHHHHHHHHHTTTTSCBC-TTCCHHHHHHHCTTCCHHHHHHHHH
T ss_pred ccccchhhhhcccccceeECCCCCHHHHHHHhhhhccCcccc-cccchhhhhhcccCCCHHHHHHHHH
Confidence 9999999987 77 568999999999999998877654432 22347889998876 4444444443
No 16
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]}
Probab=99.75 E-value=4.2e-17 Score=139.33 Aligned_cols=212 Identities=20% Similarity=0.158 Sum_probs=141.0
Q ss_pred CchhhhcCCCCCCccccCHHHHHHHHHH----HHcCCCCe-----EEEeCCCCccHHHHHHHHHHHhcCC----CCCCce
Q 020071 13 IPWVEKYRPTKVCDIVGNLDAVARLGII----ARDGNMPN-----LILAGPPGTGKTTSILALAHELLGP----NYREAV 79 (331)
Q Consensus 13 ~~~~~~~~p~~~~~~ig~~~~~~~l~~~----l~~~~~~~-----~ll~G~~G~GKt~la~~l~~~l~~~----~~~~~~ 79 (331)
.+|..+|+|..+ .|++..++.+.+. +..|..+. ++||||||+|||++++++++.+... .....+
T Consensus 7 ~~l~~~~~P~~~---~~Re~e~~~l~~~l~~~~~~~~~~~~~~~~l~l~GppGtGKT~l~~~l~~~l~~~~~~~~~~~~~ 83 (287)
T d1w5sa2 7 RVFDENYIPPEL---RVRRGEAEALARIYLNRLLSGAGLSDVNMIYGSIGRVGIGKTTLAKFTVKRVSEAAAKEGLTVKQ 83 (287)
T ss_dssp GGGSTTCCCSSC---SSSCHHHHHHHHHHHHHHHTSSCBCCEEEEEECTTCCSSSHHHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred hhcCCccCCCCC---CCHHHHHHHHHHHHHHHHHcCCCCCCcceEEEeECCCCCCHHHHHHHHHHHHHhhcccccCCcee
Confidence 478899998655 6776666665554 44443332 5789999999999999999987532 112334
Q ss_pred EEeecCCCCCh----------------------HhHHHHHHHHHhcccCCCCCCceEEEEeCCCCC------CHHHHHHH
Q 020071 80 MELNASDDRGI----------------------DVVRNKIKMFAQKKVTLPPGKHKVVVLDEADSM------TAGAQQAL 131 (331)
Q Consensus 80 ~~~~~~~~~~~----------------------~~i~~~i~~~~~~~~~~~~~~~~vviide~d~l------~~~~~~~L 131 (331)
..+++...... ....+.+...... .....++++|++|.+ ..+....+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~~~~iide~d~l~~~~~~~~~~~~~l 158 (287)
T d1w5sa2 84 AYVNAFNAPNLYTILSLIVRQTGYPIQVRGAPALDILKALVDNLYV-----ENHYLLVILDEFQSMLSSPRIAAEDLYTL 158 (287)
T ss_dssp EEEEGGGCCSHHHHHHHHHHHHTCCCCCTTCCHHHHHHHHHHHHHH-----HTCEEEEEEESTHHHHSCTTSCHHHHHHH
T ss_pred eeeccccccchhhHHHHHhhhcccccccccchHHHHHHHHHHHHHh-----ccCccccceeEEEEeccccccchhHHHHH
Confidence 44443332211 1111222221111 234678899998766 34555666
Q ss_pred HHHHHHhc-----CCcEEEEeeCCCC------CCChhhhcc-cceeeecCCCHHHHHHHHHHHHHhc--CCCCCHHHHHH
Q 020071 132 RRTMEIYS-----NSTRFALACNVSS------KIIEPIQSR-CAIVRFSRLSDEEILSRLMVVVQEE--KVPYVPEGLEA 197 (331)
Q Consensus 132 l~~le~~~-----~~~~~I~~~~~~~------~l~~~l~sr-~~~i~~~~~~~~~~~~~l~~~~~~~--~~~i~~~~~~~ 197 (331)
..+++... ....+|++++... ...+.+.+| +..+.|+|++.+++.+++..+++.. ...+++++++.
T Consensus 159 ~~l~~~l~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~r~~~~i~f~~y~~~el~~Il~~r~~~~~~~~~~~~~al~~ 238 (287)
T d1w5sa2 159 LRVHEEIPSRDGVNRIGFLLVASDVRALSYMREKIPQVESQIGFKLHLPAYKSRELYTILEQRAELGLRDTVWEPRHLEL 238 (287)
T ss_dssp HTHHHHSCCTTSCCBEEEEEEEEETHHHHHHHHHCHHHHTTCSEEEECCCCCHHHHHHHHHHHHHHHBCTTSCCHHHHHH
T ss_pred HHHHHhcchhhcccceeEEeecccHHHHHHHHhhccchhcccceeeeccCCcHHHHHHHHhhhHHHhhccCCCCHHHHHH
Confidence 66666432 3556677766543 233566665 6789999999999999999998753 34589999999
Q ss_pred HHHhc------CCCHHHHHHHHHHHh-----hCCCccchhhhhhhc
Q 020071 198 IIFTA------DGDMRQALNNLQATY-----SGFRFVNQENVFKVC 232 (331)
Q Consensus 198 l~~~~------~g~~r~~~~~l~~~~-----~~~~~i~~~~v~~~~ 232 (331)
+++.+ .||+|++++.|+.+. .+...||.++|.+++
T Consensus 239 ia~~~~~~~~~~gd~R~ai~~l~~a~~~A~~~~~~~It~~~V~~A~ 284 (287)
T d1w5sa2 239 ISDVYGEDKGGDGSARRAIVALKMACEMAEAMGRDSLSEDLVRKAV 284 (287)
T ss_dssp HHHHHCGGGTSCCCHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHH
T ss_pred HHHHHhccccCCCCHHHHHHHHHHHHHHHHHcCCCCCCHHHHHHHH
Confidence 99876 699999999997653 566789999988754
No 17
>d1r6bx2 c.37.1.20 (X:169-436) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=99.73 E-value=1.2e-16 Score=133.69 Aligned_cols=201 Identities=13% Similarity=0.143 Sum_probs=151.8
Q ss_pred CCchhhhcCCCCCCccccCHHHHHHHHHHHHcCCCCeEEEeCCCCccHHHHHHHHHHHhcCCC-----CCCceEEeecCC
Q 020071 12 DIPWVEKYRPTKVCDIVGNLDAVARLGIIARDGNMPNLILAGPPGTGKTTSILALAHELLGPN-----YREAVMELNASD 86 (331)
Q Consensus 12 ~~~~~~~~~p~~~~~~ig~~~~~~~l~~~l~~~~~~~~ll~G~~G~GKt~la~~l~~~l~~~~-----~~~~~~~~~~~~ 86 (331)
...|+++-+-..++.++|+++.+..+...+.....+|++|.||||+|||+++..+++.+.... ....++.++...
T Consensus 5 ~~dlt~~a~~~~ld~~igRd~Ei~~l~~iL~r~~k~n~lLVG~~GvGKTalv~~la~ri~~~~vp~~l~~~~i~~l~~~~ 84 (268)
T d1r6bx2 5 TTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGS 84 (268)
T ss_dssp SCBHHHHHHTTCSCCCCSCHHHHHHHHHHHTSSSSCEEEEECCTTSSHHHHHHHHHHHHHHTCSCGGGTTCEEEECCCC-
T ss_pred hHHHHHHHHcCCCCcccChHHHHHHHHHHHhcCccCCcEEECCCCCcHHHHHHHHHHHHHhCCcccccccceeEEeeech
Confidence 345677777788899999999999999999988878899999999999999999999876432 123466666543
Q ss_pred C----CChHhHHHHHHHHHhcccCCCCCCceEEEEeCCCCCC---------HHHHHHHHHHHHHhcCCcEEEEeeCCC--
Q 020071 87 D----RGIDVVRNKIKMFAQKKVTLPPGKHKVVVLDEADSMT---------AGAQQALRRTMEIYSNSTRFALACNVS-- 151 (331)
Q Consensus 87 ~----~~~~~i~~~i~~~~~~~~~~~~~~~~vviide~d~l~---------~~~~~~Ll~~le~~~~~~~~I~~~~~~-- 151 (331)
. ....++.+.+........ ..+.-++||||+|.+- .+..+.|..+|.. ....+|.+|+..
T Consensus 85 liag~~~~g~~e~r~~~i~~~~~---~~~~iIlfiDeih~l~~~g~~~g~~~d~a~~Lkp~L~r--g~i~vIgatT~eey 159 (268)
T d1r6bx2 85 LLAGTKYRGDFEKRFKALLKQLE---QDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSS--GKIRVIGSTTYQEF 159 (268)
T ss_dssp --CCCCCSSCHHHHHHHHHHHHS---SSSCEEEEETTTTTTTTSCCSSSCHHHHHHHHSSCSSS--CCCEEEEEECHHHH
T ss_pred HhccCccchhHHHHHHHHHHHhh---ccCCceEEecchHHHhcCCCCCCccccHHHHhhHHHhC--CCCeEEEeCCHHHH
Confidence 3 123456665554444332 3456799999999882 2445666667763 568888887652
Q ss_pred ---CCCChhhhcccceeeecCCCHHHHHHHHHHHHH----hcCCCCCHHHHHHHHHhc------CCCHHHHHHHHHHHh
Q 020071 152 ---SKIIEPIQSRCAIVRFSRLSDEEILSRLMVVVQ----EEKVPYVPEGLEAIIFTA------DGDMRQALNNLQATY 217 (331)
Q Consensus 152 ---~~l~~~l~sr~~~i~~~~~~~~~~~~~l~~~~~----~~~~~i~~~~~~~l~~~~------~g~~r~~~~~l~~~~ 217 (331)
..-.+++.+||+.+.+.+|+.++...+|..... .+++.++++++..+++++ ..-|.+++..++.++
T Consensus 160 ~~~~e~d~al~rrF~~I~V~Eps~e~t~~IL~~~~~~~e~~h~v~~~~~al~~~v~ls~ryi~~~~~PdKAIdllDea~ 238 (268)
T d1r6bx2 160 SNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAG 238 (268)
T ss_dssp HCCCCCTTSSGGGEEEEECCCCCHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHCTTSCTTHHHHHHHHHHH
T ss_pred HHHHhhcHHHHhhhcccccCCCCHHHHHHHHHHhhHHHhccCCEEeChHHHHHHHHHHHhhccCCCCCcHHHHHHHHHH
Confidence 355789999999999999999999999877543 468999999999988775 357999999998764
No 18
>d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]}
Probab=99.72 E-value=8.2e-17 Score=131.33 Aligned_cols=183 Identities=15% Similarity=0.180 Sum_probs=129.7
Q ss_pred CCCccc-c--CHHHHHHHHHHHHcCCC--CeEEEeCCCCccHHHHHHHHHHHhcCCCCCCceEEeecCCCCChHhHHHHH
Q 020071 23 KVCDIV-G--NLDAVARLGIIARDGNM--PNLILAGPPGTGKTTSILALAHELLGPNYREAVMELNASDDRGIDVVRNKI 97 (331)
Q Consensus 23 ~~~~~i-g--~~~~~~~l~~~l~~~~~--~~~ll~G~~G~GKt~la~~l~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i 97 (331)
+|++++ | +..+...++++++.... +.++||||+|+|||++++++++++...+ ..++.++..+. ...+.+.+
T Consensus 8 tFdnF~vg~~N~~a~~~~~~~~~~~~~~~n~l~l~G~~G~GKTHLl~A~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~ 83 (213)
T d1l8qa2 8 TLENFIVGEGNRLAYEVVKEALENLGSLYNPIFIYGSVGTGKTHLLQAAGNEAKKRG--YRVIYSSADDF--AQAMVEHL 83 (213)
T ss_dssp CSSSCCCCTTTHHHHHHHHHHHHTTTTSCSSEEEECSSSSSHHHHHHHHHHHHHHTT--CCEEEEEHHHH--HHHHHHHH
T ss_pred ChhhccCCCcHHHHHHHHHHHHhCcCCCCCcEEEECCCCCcHHHHHHHHHHHhccCc--cceEEechHHH--HHHHHHHH
Confidence 889875 5 67777778888775432 2389999999999999999999986543 33444443321 01111111
Q ss_pred -----HHHHhcccCCCCCCceEEEEeCCCCCC--HHHHHHHHHHHHHh-cCCcEEEEeeCCC----CCCChhhhccc---
Q 020071 98 -----KMFAQKKVTLPPGKHKVVVLDEADSMT--AGAQQALRRTMEIY-SNSTRFALACNVS----SKIIEPIQSRC--- 162 (331)
Q Consensus 98 -----~~~~~~~~~~~~~~~~vviide~d~l~--~~~~~~Ll~~le~~-~~~~~~I~~~~~~----~~l~~~l~sr~--- 162 (331)
..+... .....+++|||+|.+. +..++.|..++... ..+..+|++++.+ ..+.+.++||+
T Consensus 84 ~~~~~~~~~~~-----~~~~dll~iDDi~~i~~~~~~~~~lf~lin~~~~~~~~iiits~~~p~~l~~~~~dL~SRL~~g 158 (213)
T d1l8qa2 84 KKGTINEFRNM-----YKSVDLLLLDDVQFLSGKERTQIEFFHIFNTLYLLEKQIILASDRHPQKLDGVSDRLVSRFEGG 158 (213)
T ss_dssp HHTCHHHHHHH-----HHTCSEEEEECGGGGTTCHHHHHHHHHHHHHHHHTTCEEEEEESSCGGGCTTSCHHHHHHHHTS
T ss_pred HccchhhHHHH-----HhhccchhhhhhhhhcCchHHHHHHHHHHHHHhhccceEEEecCCcchhccccchHHHHHhhCc
Confidence 011110 1235699999999884 56677888888753 3566778887654 34568899994
Q ss_pred ceeeecCCCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHhcCCCHHHHHHHHHHH
Q 020071 163 AIVRFSRLSDEEILSRLMVVVQEEKVPYVPEGLEAIIFTADGDMRQALNNLQAT 216 (331)
Q Consensus 163 ~~i~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~l~~~~~g~~r~~~~~l~~~ 216 (331)
.++.++ |+.++..+++++++...|+.++++++++|++++ .|+|.+...+..+
T Consensus 159 ~~~~i~-p~d~~~~~iL~~~a~~rgl~l~~~v~~yl~~~~-~~~R~L~~~l~~l 210 (213)
T d1l8qa2 159 ILVEIE-LDNKTRFKIIKEKLKEFNLELRKEVIDYLLENT-KNVREIEGKIKLI 210 (213)
T ss_dssp EEEECC-CCHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHC-SSHHHHHHHHHHH
T ss_pred eEEEEC-CCcHHHHHHHHHHHHHcCCCCCHHHHHHHHHhc-CcHHHHHHHHHHh
Confidence 567775 577889999999999999999999999999997 5899888777654
No 19
>d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.72 E-value=3.4e-18 Score=144.55 Aligned_cols=181 Identities=20% Similarity=0.212 Sum_probs=120.3
Q ss_pred CC-CCCccccCHHHHHHHHHHHH----------c-CCC--CeEEEeCCCCccHHHHHHHHHHHhcCCCCCCceEEeecCC
Q 020071 21 PT-KVCDIVGNLDAVARLGIIAR----------D-GNM--PNLILAGPPGTGKTTSILALAHELLGPNYREAVMELNASD 86 (331)
Q Consensus 21 p~-~~~~~ig~~~~~~~l~~~l~----------~-~~~--~~~ll~G~~G~GKt~la~~l~~~l~~~~~~~~~~~~~~~~ 86 (331)
|. +|+|+.|.+++++.+.+.+. + |.. .++|||||+|+|||++|++++..+ +.+++.+++++
T Consensus 2 p~~~f~di~G~~~~k~~l~~~i~~~l~~~~~~~~~g~~~~~giLL~Gp~GtGKT~l~~ala~~~-----~~~~~~~~~~~ 76 (265)
T d1r7ra3 2 PQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANEC-----QANFISIKGPE 76 (265)
T ss_dssp CCCSCSSCSSSSCCCCHHHHHTHHHHHCHHHHHHCCCCCCCEEEEBCCTTSSHHHHHHHHHHHT-----TCEEEEECHHH
T ss_pred CCCCHHHhcCHHHHHHHHHHHHHHHhhCHHHHHhCCCCCCCeEEEECCCCCcchhHHHHHHHHh-----CCcEEEEEHHH
Confidence 45 89999998888777766542 1 322 249999999999999999999999 77788887543
Q ss_pred C----C--ChHhHHHHHHHHHhcccCCCCCCceEEEEeCCCCCCHH--------------HHHHHHHHHHHh--cCCcEE
Q 020071 87 D----R--GIDVVRNKIKMFAQKKVTLPPGKHKVVVLDEADSMTAG--------------AQQALRRTMEIY--SNSTRF 144 (331)
Q Consensus 87 ~----~--~~~~i~~~i~~~~~~~~~~~~~~~~vviide~d~l~~~--------------~~~~Ll~~le~~--~~~~~~ 144 (331)
. . ....++..+..+.. ..+.+++|||+|.+... ..+.|+..++.. ..++.+
T Consensus 77 l~~~~~~~~~~~l~~~f~~A~~-------~~p~il~ideid~l~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~v~v 149 (265)
T d1r7ra3 77 LLTMWFGESEANVREIFDKARQ-------AAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFI 149 (265)
T ss_dssp HHTSCTTTHHHHHHHHHHHHHH-------TCSEEEEESSGGGTCCHHHHCCCTTHHHHHHHHHHHHHTCC------CCEE
T ss_pred hhhccccchHHHHHHHHHHHHh-------cCCcceeHHhhhhccccCCCcCCCCcHHHHHHHHHHHHHhhCcCCCCCEEE
Confidence 2 1 12334444444332 23679999999977421 234556555432 335788
Q ss_pred EEeeCCCCCCChhhhc--cc-ceeeecCCCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHhcCC-CHHHHHHHHH
Q 020071 145 ALACNVSSKIIEPIQS--RC-AIVRFSRLSDEEILSRLMVVVQEEKVPYVPEGLEAIIFTADG-DMRQALNNLQ 214 (331)
Q Consensus 145 I~~~~~~~~l~~~l~s--r~-~~i~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~l~~~~~g-~~r~~~~~l~ 214 (331)
|++||.++.+++++++ |+ ..+.|++|+.++..++++..+++.... .+..++.+++.+.| +.+.+.+.++
T Consensus 150 i~ttn~~~~ld~al~r~gRf~~~i~~~~p~~~~R~~il~~~l~~~~~~-~~~~l~~la~~t~g~s~~di~~lv~ 222 (265)
T d1r7ra3 150 IGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVA-KDVDLEFLAKMTNGFSGADLTEICQ 222 (265)
T ss_dssp EECCBSCTTTSCGGGSSTTSEEEEECCCCCCHHHHHHHHHHTTCC-----CCCCHHHHHHHCSSCCHHHHHHHH
T ss_pred EEeCCCchhCCHHHhCCCCccEEEEecchHHHHHHHHHHHHhccCCch-hhhhHHHHHhcCCCCCHHHHHHHHH
Confidence 8999999999999986 65 467999999999999998766532211 12235667777654 4444444443
No 20
>d1ny5a2 c.37.1.20 (A:138-384) Transcriptional activator sigm54 (NtrC1), C-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=99.65 E-value=8.1e-15 Score=122.04 Aligned_cols=203 Identities=16% Similarity=0.167 Sum_probs=139.3
Q ss_pred ccccCHHHHHHHHHHHHcC-C-CCeEEEeCCCCccHHHHHHHHHHHhcCCCCCCceEEeecCCCCChHhHHHHHHHHHhc
Q 020071 26 DIVGNLDAVARLGIIARDG-N-MPNLILAGPPGTGKTTSILALAHELLGPNYREAVMELNASDDRGIDVVRNKIKMFAQK 103 (331)
Q Consensus 26 ~~ig~~~~~~~l~~~l~~~-~-~~~~ll~G~~G~GKt~la~~l~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~ 103 (331)
++||++..++.+.+.++.- . ..+++++||+|+||+.+|++++..... ...+++.+++..... ......+-.....
T Consensus 1 ~~v~~S~~~~~~~~~~~~~a~~~~pvlI~Ge~GtGK~~~A~~ih~~s~~--~~~~~~~~~~~~~~~-~~~~~~lfg~~~~ 77 (247)
T d1ny5a2 1 EYVFESPKMKEILEKIKKISCAECPVLITGESGVGKEVVARLIHKLSDR--SKEPFVALNVASIPR-DIFEAELFGYEKG 77 (247)
T ss_dssp CCCCCSHHHHHHHHHHHHHTTCCSCEEEECSTTSSHHHHHHHHHHHSTT--TTSCEEEEETTTSCH-HHHHHHHHCBCTT
T ss_pred CeEecCHHHHHHHHHHHHHhCCCCCEEEECCCCcCHHHHHHHHHHhcCC--cccccccchhhhhhh-cccHHHhcCcccC
Confidence 5799999999888877663 2 223999999999999999999985433 355678888776532 2222222111111
Q ss_pred ccCCC---------CCCceEEEEeCCCCCCHHHHHHHHHHHHHhc-----------CCcEEEEeeCCC-------CCCCh
Q 020071 104 KVTLP---------PGKHKVVVLDEADSMTAGAQQALRRTMEIYS-----------NSTRFALACNVS-------SKIIE 156 (331)
Q Consensus 104 ~~~~~---------~~~~~vviide~d~l~~~~~~~Ll~~le~~~-----------~~~~~I~~~~~~-------~~l~~ 156 (331)
.+... ..++++++|||+|.++...|..|++++++.. .++++|++++.. ..+.+
T Consensus 78 ~~~~~~~~~~g~l~~a~gGtL~l~~i~~L~~~~Q~~L~~~l~~~~~~~~~~~~~~~~~~RlI~~s~~~l~~l~~~~~f~~ 157 (247)
T d1ny5a2 78 AFTGAVSSKEGFFELADGGTLFLDEIGELSLEAQAKLLRVIESGKFYRLGGRKEIEVNVRILAATNRNIKELVKEGKFRE 157 (247)
T ss_dssp SSTTCCSCBCCHHHHTTTSEEEEESGGGCCHHHHHHHHHHHHHSEECCBTCCSBEECCCEEEEEESSCHHHHHHTTSSCH
T ss_pred CcCCcccccCCHHHccCCCEEEEeChHhCCHHHHHHHHHHHHhCCEEECCCCCceecCeEEEEecCCCHHHHHHcCCCcH
Confidence 11000 1235699999999999999999999998522 357899988753 24566
Q ss_pred hhhccc--ceeeecCCCH--HHHHHHHHH----HHHhcCC---CCCHHHHHHHHHhc-CCCHHHHHHHHHHHh--hCCCc
Q 020071 157 PIQSRC--AIVRFSRLSD--EEILSRLMV----VVQEEKV---PYVPEGLEAIIFTA-DGDMRQALNNLQATY--SGFRF 222 (331)
Q Consensus 157 ~l~sr~--~~i~~~~~~~--~~~~~~l~~----~~~~~~~---~i~~~~~~~l~~~~-~g~~r~~~~~l~~~~--~~~~~ 222 (331)
.+..|+ ..+.++|+.+ +++..++.. .+.+.+. .+++++++.|..+. .||++++.+.++.++ ..+..
T Consensus 158 ~L~~~l~~~~i~lPpLreR~~Di~~l~~~~l~~~~~~~~~~~~~ls~~al~~L~~~~WPGNl~EL~~~l~~a~~~~~~~~ 237 (247)
T d1ny5a2 158 DLYYRLGVIEIEIPPLRERKEDIIPLANHFLKKFSRKYAKEVEGFTKSAQELLLSYPWYGNVRELKNVIERAVLFSEGKF 237 (247)
T ss_dssp HHHHHHTTEEEECCCGGGCHHHHHHHHHHHHHHHHHHTTCCCCEECHHHHHHHHHSCCTTHHHHHHHHHHHHHHHCCSSE
T ss_pred HHHhhcCeeeecCCChhhchhhHhhhhhhhhhhhhhhcCCCCCCCCHHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCCe
Confidence 676764 3467888853 566544444 4444443 37899999998887 799999999998764 45667
Q ss_pred cchhhhhhh
Q 020071 223 VNQENVFKV 231 (331)
Q Consensus 223 i~~~~v~~~ 231 (331)
|+.+++-.+
T Consensus 238 I~~~dl~~l 246 (247)
T d1ny5a2 238 IDRGELSCL 246 (247)
T ss_dssp ECHHHHHHH
T ss_pred ECHHHcccc
Confidence 888877543
No 21
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=99.61 E-value=1e-14 Score=128.56 Aligned_cols=199 Identities=17% Similarity=0.183 Sum_probs=139.7
Q ss_pred chhhhcCCCCCCccccCHHHHHHHHHHHHcCCCCeEEEeCCCCccHHHHHHHHHHHhcCCCC-----CCceEEeecCCCC
Q 020071 14 PWVEKYRPTKVCDIVGNLDAVARLGIIARDGNMPNLILAGPPGTGKTTSILALAHELLGPNY-----REAVMELNASDDR 88 (331)
Q Consensus 14 ~~~~~~~p~~~~~~ig~~~~~~~l~~~l~~~~~~~~ll~G~~G~GKt~la~~l~~~l~~~~~-----~~~~~~~~~~~~~ 88 (331)
.++++-+-..++.++|++..+..+...+.....++++|.||||+|||+++..+++.+..... +..++.++.....
T Consensus 11 ~l~~~a~~g~ld~~~gr~~ei~~~~~~L~r~~k~n~llvG~~GvGKtaiv~~la~~i~~~~vp~~l~~~~i~~ld~~~l~ 90 (387)
T d1qvra2 11 DLTRLAAEGKLDPVIGRDEEIRRVIQILLRRTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLKGKRIVSLQMGSLL 90 (387)
T ss_dssp EHHHHHHTTCSCCCCSCHHHHHHHHHHHHCSSCCCCEEEECTTSCHHHHHHHHHHHHHHTCSCTTSTTCEEEEECC----
T ss_pred HHHHHHHcCCCCCCcCcHHHHHHHHHHHhcCCCCCCeEECCCCCCHHHHHHHHHHHHHhCCCCHHHcCceEEEeeHhhhh
Confidence 35566667788999999999999999999887777999999999999999999998754321 2356666654432
Q ss_pred ----ChHhHHHHHHHHHhcccCCCCCCceEEEEeCCCCCC--------HHHHHHHHHHHHHhcCCcEEEEeeCCC-----
Q 020071 89 ----GIDVVRNKIKMFAQKKVTLPPGKHKVVVLDEADSMT--------AGAQQALRRTMEIYSNSTRFALACNVS----- 151 (331)
Q Consensus 89 ----~~~~i~~~i~~~~~~~~~~~~~~~~vviide~d~l~--------~~~~~~Ll~~le~~~~~~~~I~~~~~~----- 151 (331)
...++.+.+......... ..+.-|+||||+|.+- .++.+.|..+|.. ...++|.+|+..
T Consensus 91 ag~~~~g~~e~r~~~i~~~~~~--~~~~~ilfide~h~l~~~g~~~g~~d~a~~Lkp~L~r--g~~~~I~~tT~~ey~~~ 166 (387)
T d1qvra2 91 AGAKYRGEFEERLKAVIQEVVQ--SQGEVILFIDELHTVVGAGKAEGAVDAGNMLKPALAR--GELRLIGATTLDEYREI 166 (387)
T ss_dssp -------CHHHHHHHHHHHHHT--TCSSEEEEECCC-------------------HHHHHT--TCCCEEEEECHHHHHHH
T ss_pred cccCcchhHHHHHHHHHHHhcc--CCCceEEEeccHHHHhcCCCCCCcccHHHHHHHHHhC--CCcceeeecCHHHHHHh
Confidence 123455554443332210 1235689999999883 2456888889976 557778877642
Q ss_pred CCCChhhhcccceeeecCCCHHHHHHHHHHHHH----hcCCCCCHHHHHHHHHhc------CCCHHHHHHHHHHHh
Q 020071 152 SKIIEPIQSRCAIVRFSRLSDEEILSRLMVVVQ----EEKVPYVPEGLEAIIFTA------DGDMRQALNNLQATY 217 (331)
Q Consensus 152 ~~l~~~l~sr~~~i~~~~~~~~~~~~~l~~~~~----~~~~~i~~~~~~~l~~~~------~g~~r~~~~~l~~~~ 217 (331)
.+ .+++.+||+.+.+.+|+.++...+|+.... .+++.++++++...++++ ..-|.+++.+++.++
T Consensus 167 e~-d~al~rrF~~v~v~ep~~~~~~~il~~~~~~~e~~h~v~~~~~ai~~~v~ls~ryi~~r~~PdKAidlld~a~ 241 (387)
T d1qvra2 167 EK-DPALERRFQPVYVDEPTVEETISILRGLKEKYEVHHGVRISDSAIIAAATLSHRYITERRLPDKAIDLIDEAA 241 (387)
T ss_dssp TT-CTTTCSCCCCEEECCCCHHHHHHHHHHHHHHHHHHTTCEECHHHHHHHHHHHHHHCCSSCTHHHHHHHHHHHH
T ss_pred cc-cHHHHHhcccccCCCCcHHHHHHHHHHHHHHHHhccCCcccHHHHHHHHHhcccccccccChhhHHHHHHHHH
Confidence 33 688999999999999999999999887654 458999999999988775 368999999998764
No 22
>d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=99.60 E-value=7.6e-15 Score=122.18 Aligned_cols=175 Identities=15% Similarity=0.202 Sum_probs=108.6
Q ss_pred CCccccCHHHHHHHHH-------HHHcCC--CCe-EEEeCCCCccHHHHHHHHHHHhcCCCCCCceEEeecCCCC---Ch
Q 020071 24 VCDIVGNLDAVARLGI-------IARDGN--MPN-LILAGPPGTGKTTSILALAHELLGPNYREAVMELNASDDR---GI 90 (331)
Q Consensus 24 ~~~~ig~~~~~~~l~~-------~l~~~~--~~~-~ll~G~~G~GKt~la~~l~~~l~~~~~~~~~~~~~~~~~~---~~ 90 (331)
.+.++|..+.+..+.+ .++.+. .+. +|||||||||||++|+++++.+ +.+++.+++++.. ..
T Consensus 8 ~~~~i~~~~~i~~i~~~~~~~~~~~~~~~~~p~~~vLL~GppGtGKT~la~alA~~~-----~~~~~~i~~~~~~~g~~~ 82 (246)
T d1d2na_ 8 MNGIIKWGDPVTRVLDDGELLVQQTKNSDRTPLVSVLLEGPPHSGKTALAAKIAEES-----NFPFIKICSPDKMIGFSE 82 (246)
T ss_dssp TTCCCCCSHHHHHHHHHHHHHHHHHHHCSSCSEEEEEEECSTTSSHHHHHHHHHHHH-----TCSEEEEECGGGCTTCCH
T ss_pred ccCCcCcCHHHHHHHHHHHHHHHHHhccCCCCCeEEEEECcCCCCHHHHHHHHhhcc-----cccccccccccccccccc
Confidence 3457776554443322 233332 222 8999999999999999999998 7788888875421 11
Q ss_pred ----HhHHHHHHHHHhcccCCCCCCceEEEEeCCCCC----------CHHHHHHHHHHHHHhcC---CcEEEEeeCCCCC
Q 020071 91 ----DVVRNKIKMFAQKKVTLPPGKHKVVVLDEADSM----------TAGAQQALRRTMEIYSN---STRFALACNVSSK 153 (331)
Q Consensus 91 ----~~i~~~i~~~~~~~~~~~~~~~~vviide~d~l----------~~~~~~~Ll~~le~~~~---~~~~I~~~~~~~~ 153 (331)
..+++.+..+. ...+.|++|||+|.+ .....+.|+..++.... .+.+|.+||.++.
T Consensus 83 ~~~~~~i~~if~~A~-------~~~p~il~iDEid~l~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~~v~vi~tTn~~~~ 155 (246)
T d1d2na_ 83 TAKCQAMKKIFDDAY-------KSQLSCVVVDDIERLLDYVPIGPRFSNLVLQALLVLLKKAPPQGRKLLIIGTTSRKDV 155 (246)
T ss_dssp HHHHHHHHHHHHHHH-------TSSEEEEEECCHHHHTTCBTTTTBCCHHHHHHHHHHTTCCCSTTCEEEEEEEESCHHH
T ss_pred cchhhhhhhhhhhhh-------hcccceeehhhhhhHhhhcccccchhHHHHHHHHHHhcCCCccccceeeeeccCChhh
Confidence 22333333332 234679999999765 23345677777775432 4567778888766
Q ss_pred CChh-hhcccc-eeeecCCC-HHHHHHHHHHHHHhcCCCCCHHHHHHHHHhcCC-----CHHHHHHHHHH
Q 020071 154 IIEP-IQSRCA-IVRFSRLS-DEEILSRLMVVVQEEKVPYVPEGLEAIIFTADG-----DMRQALNNLQA 215 (331)
Q Consensus 154 l~~~-l~sr~~-~i~~~~~~-~~~~~~~l~~~~~~~~~~i~~~~~~~l~~~~~g-----~~r~~~~~l~~ 215 (331)
+.+. +++|+. .+.++.++ .+++.+++... + .+++.....+++.+.| .++.+++.++.
T Consensus 156 ld~~~~~~rF~~~i~~P~~~~r~~il~~l~~~----~-~~~~~~~~~i~~~~~g~~~~~~ik~ll~~ie~ 220 (246)
T d1d2na_ 156 LQEMEMLNAFSTTIHVPNIATGEQLLEALELL----G-NFKDKERTTIAQQVKGKKVWIGIKKLLMLIEM 220 (246)
T ss_dssp HHHTTCTTTSSEEEECCCEEEHHHHHHHHHHH----T-CSCHHHHHHHHHHHTTSEEEECHHHHHHHHHH
T ss_pred ccchhhcCccceEEecCCchhHHHHHHHHHhc----c-CCChHHHHHHHHHcCCCccchhHHHHHHHHHH
Confidence 6544 667775 46775443 34555554432 2 4667777777777665 36666666554
No 23
>d1ofha_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=99.58 E-value=2.8e-15 Score=129.33 Aligned_cols=147 Identities=23% Similarity=0.309 Sum_probs=99.1
Q ss_pred cccCHHHHHHHHHHHHc-------------C-CCCeEEEeCCCCccHHHHHHHHHHHhcCCCCCCceEEeecCCCCC---
Q 020071 27 IVGNLDAVARLGIIARD-------------G-NMPNLILAGPPGTGKTTSILALAHELLGPNYREAVMELNASDDRG--- 89 (331)
Q Consensus 27 ~ig~~~~~~~l~~~l~~-------------~-~~~~~ll~G~~G~GKt~la~~l~~~l~~~~~~~~~~~~~~~~~~~--- 89 (331)
++||+++++.+..++.+ + ...++||+||||||||.+|+++++.+ ..+++.++++....
T Consensus 16 ViGQd~A~~~l~~av~~~~~r~~~~~~~~~~~~~~~iLl~GPpG~GKT~lAkalA~~~-----~~~~~~i~~s~~~~~~~ 90 (309)
T d1ofha_ 16 IIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLA-----NAPFIKVEATKFTEVGY 90 (309)
T ss_dssp CCSCHHHHHHHHHHHHHHHHTTSSCHHHHHHCCCCCEEEECCTTSSHHHHHHHHHHHH-----TCCEEEEEGGGGSSCCS
T ss_pred ccChHHHHHHHHHHHHHHHHHhccCCCCccCCCCceEEEECCCCCCHHHHHHHHhhcc-----ccchhccccccccccee
Confidence 79999999998877631 1 23349999999999999999999998 66778877655321
Q ss_pred -h----HhHHHHHHHHHhcccCCCCCCceEEEEeCCCCCCHH------------HHHHHHHHHHHh----------cCCc
Q 020071 90 -I----DVVRNKIKMFAQKKVTLPPGKHKVVVLDEADSMTAG------------AQQALRRTMEIY----------SNST 142 (331)
Q Consensus 90 -~----~~i~~~i~~~~~~~~~~~~~~~~vviide~d~l~~~------------~~~~Ll~~le~~----------~~~~ 142 (331)
. ..++........... ....+.||++||+|++++. .++.|+..++.. ..++
T Consensus 91 ~~~~~~~~~~~~f~~a~~~~~--~~~~~~IIf~DEIdki~~~~~~~~~~~~~~gv~~~LL~~~dg~~~~~~~~~i~~s~i 168 (309)
T d1ofha_ 91 VGKEVDSIIRDLTDSAGGAID--AVEQNGIVFIDEIDKICKKGEYSGADVSREGVQRDLLPLVEGSTVSTKHGMVKTDHI 168 (309)
T ss_dssp GGGSTTHHHHHHHHTTTTCHH--HHHHHCEEEEECGGGGSCCSSCCSSHHHHHHHHHHHHHHHHCCEEEETTEEEECTTC
T ss_pred Eeeeccccccccchhhhcccc--cccCCceEEehhhhhhhhhccCcccchhhhHHHHHhhHHhcCCEEecCCeEEEccce
Confidence 1 123333221111000 0012579999999998532 467788888731 1234
Q ss_pred EEEEe----eCCCCCCChhhhcccce-eeecCCCHHHHHHHHH
Q 020071 143 RFALA----CNVSSKIIEPIQSRCAI-VRFSRLSDEEILSRLM 180 (331)
Q Consensus 143 ~~I~~----~~~~~~l~~~l~sr~~~-i~~~~~~~~~~~~~l~ 180 (331)
.||++ .+.+..+.|.++.|+.. +.|.+|+..++.+++.
T Consensus 169 lfi~~ga~~~~~~~~~~p~l~~R~~~~i~~~~~~~~~~~~Il~ 211 (309)
T d1ofha_ 169 LFIASGAFQVARPSDLIPELQGRLPIRVELTALSAADFERILT 211 (309)
T ss_dssp EEEEEECCSSSCGGGSCHHHHHTCCEEEECCCCCHHHHHHHHH
T ss_pred eEEeccchhhcCcccchhhhhhhhheeeeccCCCHHHHHHHHH
Confidence 45544 24456788999999854 7899999999988864
No 24
>d1r6bx3 c.37.1.20 (X:437-751) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=99.57 E-value=6.6e-14 Score=120.75 Aligned_cols=167 Identities=17% Similarity=0.203 Sum_probs=118.8
Q ss_pred CccccCHHHHHHHHHHHHc--------CCCC-eEEEeCCCCccHHHHHHHHHHHhcCCCCCCceEEeecCCCCC------
Q 020071 25 CDIVGNLDAVARLGIIARD--------GNMP-NLILAGPPGTGKTTSILALAHELLGPNYREAVMELNASDDRG------ 89 (331)
Q Consensus 25 ~~~ig~~~~~~~l~~~l~~--------~~~~-~~ll~G~~G~GKt~la~~l~~~l~~~~~~~~~~~~~~~~~~~------ 89 (331)
..++||+++++.+...+.. .++. .++|+||+|+|||.+|+.+++.+ ..+++.++++....
T Consensus 22 ~~viGQ~~a~~~v~~~v~~~~~~l~~~~~p~~~~lf~Gp~GvGKT~lak~la~~l-----~~~~i~~d~s~~~~~~~~~~ 96 (315)
T d1r6bx3 22 MLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL-----GIELLRFDMSEYMERHTVSR 96 (315)
T ss_dssp TTSCSCHHHHHHHHHHHHHHHTTCSCTTSCSEEEEEECSTTSSHHHHHHHHHHHH-----TCEEEEEEGGGCSSSSCCSS
T ss_pred CeecChHHHHHHHHHHHHHHHccCCCCCCCceEEEEECCCcchhHHHHHHHHhhc-----cCCeeEeccccccchhhhhh
Confidence 3589999999988777642 2222 37999999999999999999998 56677777653311
Q ss_pred --------hH-hHHHHHHHHHhcccCCCCCCceEEEEeCCCCCCHHHHHHHHHHHHHh-----------cCCcEEEEeeC
Q 020071 90 --------ID-VVRNKIKMFAQKKVTLPPGKHKVVVLDEADSMTAGAQQALRRTMEIY-----------SNSTRFALACN 149 (331)
Q Consensus 90 --------~~-~i~~~i~~~~~~~~~~~~~~~~vviide~d~l~~~~~~~Ll~~le~~-----------~~~~~~I~~~~ 149 (331)
.. .....+..... ..++.|+++||+|+.+++.++.|++++++. -.++.+|+++|
T Consensus 97 l~g~~~gy~g~~~~~~l~~~~~------~~~~~vvl~DeieKa~~~V~~~lLqild~G~ltd~~Gr~vdf~n~iiI~Tsn 170 (315)
T d1r6bx3 97 LIGAPPGYVGFDQGGLLTDAVI------KHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTN 170 (315)
T ss_dssp SCCCCSCSHHHHHTTHHHHHHH------HCSSEEEEEETGGGSCHHHHHHHHHHHHHSEEEETTTEEEECTTEEEEEEEC
T ss_pred hcccCCCccccccCChhhHHHH------hCccchhhhcccccccchHhhhhHHhhccceecCCCCCccCccceEEEeccc
Confidence 00 01111122111 234789999999999999999999999852 25677888877
Q ss_pred CCC-------------------------CCChhhhcccc-eeeecCCCHHHHHHHHHHHHH-------hcC--CCCCHHH
Q 020071 150 VSS-------------------------KIIEPIQSRCA-IVRFSRLSDEEILSRLMVVVQ-------EEK--VPYVPEG 194 (331)
Q Consensus 150 ~~~-------------------------~l~~~l~sr~~-~i~~~~~~~~~~~~~l~~~~~-------~~~--~~i~~~~ 194 (331)
--. .+.|.+.+|+. ++.|.|++.+++.+++...+. ..+ +.+++++
T Consensus 171 ig~~~i~~~~~~~~~~~~~~~~~~~l~~~f~pEflnRid~ii~f~~l~~~~~~~I~~~~l~~~~~~l~~~~i~l~~~~~a 250 (315)
T d1r6bx3 171 AGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEA 250 (315)
T ss_dssp SSCC-----------------CHHHHHHHSCHHHHTTCSEEEECCCCCHHHHHHHHHHHHHHHHHHHHHTTEEEEECHHH
T ss_pred hhhHHHHhhhccchhhhhhHhHHHHHHHhcCHHHHhhhhhhhcccchhhhHHHHHHHHHHHHHHHHHHhcCcchhhHHHH
Confidence 311 25678888985 679999999998888655433 223 4578999
Q ss_pred HHHHHHhc
Q 020071 195 LEAIIFTA 202 (331)
Q Consensus 195 ~~~l~~~~ 202 (331)
.++|+...
T Consensus 251 ~~~l~~~~ 258 (315)
T d1r6bx3 251 RNWLAEKG 258 (315)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhC
Confidence 99998764
No 25
>d1qvra3 c.37.1.20 (A:536-850) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=99.53 E-value=8.4e-14 Score=119.85 Aligned_cols=169 Identities=19% Similarity=0.275 Sum_probs=120.1
Q ss_pred ccccCHHHHHHHHHHHHc-------CCCC--eEEEeCCCCccHHHHHHHHHHHhcCCCCCCceEEeecCCCCChHhH---
Q 020071 26 DIVGNLDAVARLGIIARD-------GNMP--NLILAGPPGTGKTTSILALAHELLGPNYREAVMELNASDDRGIDVV--- 93 (331)
Q Consensus 26 ~~ig~~~~~~~l~~~l~~-------~~~~--~~ll~G~~G~GKt~la~~l~~~l~~~~~~~~~~~~~~~~~~~~~~i--- 93 (331)
.++||+++++.+...+.. ...| .++|+||+|+|||.+|+.+++.+.+. ..+++.++++.......+
T Consensus 24 ~v~GQ~~ai~~v~~~i~~~~~~l~~~~kp~~~~lf~Gp~G~GKt~lak~la~~l~~~--~~~~~~~~~~~~~~~~~~~~L 101 (315)
T d1qvra3 24 RVVGQDEAIRAVADAIRRARAGLKDPNRPIGSFLFLGPTGVGKTELAKTLAATLFDT--EEAMIRIDMTEYMEKHAVSRL 101 (315)
T ss_dssp HSCSCHHHHHHHHHHHHHHGGGCSCSSSCSEEEEEBSCSSSSHHHHHHHHHHHHHSS--GGGEEEECTTTCCSSGGGGGC
T ss_pred eEeCHHHHHHHHHHHHHHHhcCCCCCCCCceEEEEECCCcchHHHHHHHHHHHhcCC--CcceEEEeccccccchhhhhh
Confidence 579999999988776642 1222 26999999999999999999998644 456777776544221100
Q ss_pred ------------HHHHHHHHhcccCCCCCCceEEEEeCCCCCCHHHHHHHHHHHHHh-----------cCCcEEEEeeCC
Q 020071 94 ------------RNKIKMFAQKKVTLPPGKHKVVVLDEADSMTAGAQQALRRTMEIY-----------SNSTRFALACNV 150 (331)
Q Consensus 94 ------------~~~i~~~~~~~~~~~~~~~~vviide~d~l~~~~~~~Ll~~le~~-----------~~~~~~I~~~~~ 150 (331)
...+..... ..++.||++||+|+++++.++.|+.++++. ..++.+|+++|-
T Consensus 102 ~g~~~gyvG~~~~~~l~~~~~------~~p~~Vvl~DEieK~~~~v~~~ll~~l~~g~~~~~~gr~v~~~~~i~i~tsnl 175 (315)
T d1qvra3 102 IGAPPGYVGYEEGGQLTEAVR------RRPYSVILFDEIEKAHPDVFNILLQILDDGRLTDSHGRTVDFRNTVIILTSNL 175 (315)
T ss_dssp --------------CHHHHHH------HCSSEEEEESSGGGSCHHHHHHHHHHHTTTEECCSSSCCEECTTEEEEEECCT
T ss_pred cCCCCCCcCcccCChHHHHHH------hCCCcEEEEehHhhcCHHHHHHHHHHhccCceeCCCCcEecCcceEEEEeccc
Confidence 011111111 134789999999999999999999999852 146677888773
Q ss_pred --------------------------CCCCChhhhcccce-eeecCCCHHHHHHHHHHHHH-------hcC--CCCCHHH
Q 020071 151 --------------------------SSKIIEPIQSRCAI-VRFSRLSDEEILSRLMVVVQ-------EEK--VPYVPEG 194 (331)
Q Consensus 151 --------------------------~~~l~~~l~sr~~~-i~~~~~~~~~~~~~l~~~~~-------~~~--~~i~~~~ 194 (331)
...+.|.+.+|+.. +.|.|++.+++.+++..... ..+ +.+++++
T Consensus 176 G~~~i~~~~~~~~~~~~~~~~~~~~l~~~f~pEflnRid~Ii~F~~L~~~~~~~I~~~~l~~l~~rl~~~~i~l~i~~~~ 255 (315)
T d1qvra3 176 GSPLILEGLQKGWPYERIRDEVFKVLQQHFRPEFLNRLDEIVVFRPLTKEQIRQIVEIQLSYLRARLAEKRISLELTEAA 255 (315)
T ss_dssp THHHHHHHHHTTCCHHHHHHHHHHHHHTTSCHHHHHTCSBCCBCCCCCHHHHHHHHHHHHHHHHHHHHTTTCEEEECHHH
T ss_pred ChHHHhhhcccccchhhhhHHHHHHHHhhcCHHHHhcCCeeeeccchhhhhhHHHHHHHHHHHHHHHHhccccccccHHH
Confidence 13578899999865 58999999999888764433 223 4568999
Q ss_pred HHHHHHhc
Q 020071 195 LEAIIFTA 202 (331)
Q Consensus 195 ~~~l~~~~ 202 (331)
.++|++.+
T Consensus 256 ~~~L~~~~ 263 (315)
T d1qvra3 256 KDFLAERG 263 (315)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhC
Confidence 99999874
No 26
>d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]}
Probab=99.52 E-value=1.6e-13 Score=120.19 Aligned_cols=182 Identities=19% Similarity=0.255 Sum_probs=116.3
Q ss_pred ccccCHHHHHHHHHHHHc-----------------------------C-CCCeEEEeCCCCccHHHHHHHHHHHhcCCCC
Q 020071 26 DIVGNLDAVARLGIIARD-----------------------------G-NMPNLILAGPPGTGKTTSILALAHELLGPNY 75 (331)
Q Consensus 26 ~~ig~~~~~~~l~~~l~~-----------------------------~-~~~~~ll~G~~G~GKt~la~~l~~~l~~~~~ 75 (331)
.++||+++++.+..++.+ . ..+++||.||+|+|||.+|+.+++.+
T Consensus 18 ~ViGQd~Akkava~Avrn~~rR~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~niLfiGPTGvGKTElAk~LA~~~----- 92 (364)
T d1um8a_ 18 YVIGQEQAKKVFSVAVYNHYKRLSFKEKLKKQDNQDSNVELEHLEEVELSKSNILLIGPTGSGKTLMAQTLAKHL----- 92 (364)
T ss_dssp TCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHTTCCCCCEEEECCTTSSHHHHHHHHHHHT-----
T ss_pred eecChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccccccCCCcceeeeCCCCccHHHHHHHHHhhc-----
Confidence 489999999887765521 2 23449999999999999999999987
Q ss_pred CCceEEeecCCCCCh--------HhHHHHHHHHHhcccCCCCCCceEEEEeCCCC--------------CCHHHHHHHHH
Q 020071 76 REAVMELNASDDRGI--------DVVRNKIKMFAQKKVTLPPGKHKVVVLDEADS--------------MTAGAQQALRR 133 (331)
Q Consensus 76 ~~~~~~~~~~~~~~~--------~~i~~~i~~~~~~~~~~~~~~~~vviide~d~--------------l~~~~~~~Ll~ 133 (331)
..+++.++++..... ..+.+.+... +......++.+|++||+++ .++..++.|++
T Consensus 93 ~~~~ir~D~s~~~e~gyvg~dv~~~i~~l~~~~---~~~v~~~~~~iv~lDEieK~~~~s~~~~~~~d~a~~~V~~~lLq 169 (364)
T d1um8a_ 93 DIPIAISDATSLTEAGYVGEDVENILTRLLQAS---DWNVQKAQKGIVFIDEIDKISRLSENRSITRDVSGEGVQQALLK 169 (364)
T ss_dssp TCCEEEEEGGGCC--------CTHHHHHHHHHT---TTCHHHHTTSEEEEETGGGC--------------CHHHHHHHHH
T ss_pred ccceeehhhhhcccchhhHhhhccchhhhhhhc---hhHHHHhhcccchhhhhhhhccccccccccccccchHHHHhhhh
Confidence 667887776654321 2233333221 1101123578999999998 55668999999
Q ss_pred HHHHhc-------------CCcEEEEeeCC-------------------------------------------------C
Q 020071 134 TMEIYS-------------NSTRFALACNV-------------------------------------------------S 151 (331)
Q Consensus 134 ~le~~~-------------~~~~~I~~~~~-------------------------------------------------~ 151 (331)
.++... .++.++.++|- .
T Consensus 170 ild~~~~~~~~~~gr~~~~~~~i~i~t~~i~~~~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (364)
T d1um8a_ 170 IVEGSLVNIPPKGGRKHPEGNFIQIDTSDILFICAGAFDGLAEIIKKRTTQNVLGFTQEKMSKKEQEAILHLVQTHDLVT 249 (364)
T ss_dssp HHHCCEEC---------------CEECTTCEEEEEECCTTHHHHTTTSCSSCCCSCCCSSCCTTTTTTSGGGCCHHHHHH
T ss_pred hhcCceeccCCCCCCcCCcceeEEEeehhhhhhhcccchhhhhhhhhhcccccccccccccchhhhhhhhccccHHHHhh
Confidence 999311 12222222211 0
Q ss_pred CCCChhhhcccce-eeecCCCHHHHHHHHHH-----------HHHhcCC--CCCHHHHHHHHHhc---CCCHHHHHHHHH
Q 020071 152 SKIIEPIQSRCAI-VRFSRLSDEEILSRLMV-----------VVQEEKV--PYVPEGLEAIIFTA---DGDMRQALNNLQ 214 (331)
Q Consensus 152 ~~l~~~l~sr~~~-i~~~~~~~~~~~~~l~~-----------~~~~~~~--~i~~~~~~~l~~~~---~g~~r~~~~~l~ 214 (331)
..+.|.+..|... +.|.|++.+++.+++.. .++.+|+ .++++++++|++.+ .--.|.+...++
T Consensus 250 ~~f~PEf~gRi~~iv~f~~L~~~~l~~Il~~~~~~l~kq~~~~l~~~gi~L~~td~a~~~la~~g~d~~~GAR~L~riie 329 (364)
T d1um8a_ 250 YGLIPELIGRLPVLSTLDSISLEAMVDILQKPKNALIKQYQQLFKMDEVDLIFEEEAIKEIAQLALERKTGARGLRAIIE 329 (364)
T ss_dssp TTCCHHHHTTCCEEEECCCCCHHHHHHHHHSSTTCHHHHHHHHHHTTTCEEEECHHHHHHHHHHHHHTTCTGGGHHHHHH
T ss_pred hhhHHHHHHHhcchhhHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEECHHHHHHHHHhccCCCCCchHHHHHHH
Confidence 1256778888755 69999999999998852 2333454 46899999999864 223444444444
Q ss_pred H
Q 020071 215 A 215 (331)
Q Consensus 215 ~ 215 (331)
.
T Consensus 330 ~ 330 (364)
T d1um8a_ 330 D 330 (364)
T ss_dssp H
T ss_pred H
Confidence 3
No 27
>d1jbka_ c.37.1.20 (A:) ClpB, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=99.51 E-value=6.3e-14 Score=110.60 Aligned_cols=162 Identities=17% Similarity=0.232 Sum_probs=119.8
Q ss_pred chhhhcCCCCCCccccCHHHHHHHHHHHHcCCCCeEEEeCCCCccHHHHHHHHHHHhcCCC-----CCCceEEeecCC--
Q 020071 14 PWVEKYRPTKVCDIVGNLDAVARLGIIARDGNMPNLILAGPPGTGKTTSILALAHELLGPN-----YREAVMELNASD-- 86 (331)
Q Consensus 14 ~~~~~~~p~~~~~~ig~~~~~~~l~~~l~~~~~~~~ll~G~~G~GKt~la~~l~~~l~~~~-----~~~~~~~~~~~~-- 86 (331)
.++++.+...++.++|++..+..+...+.....+|++|.||||+|||+++..+++.+.... .+..++.++...
T Consensus 11 dlt~~a~~g~ld~~igRd~Ei~~l~~iL~r~~k~n~lLvG~pGVGKTalv~~LA~ri~~~~vp~~L~~~~i~~ld~~~Li 90 (195)
T d1jbka_ 11 DLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALV 90 (195)
T ss_dssp EHHHHHHTTCSCCCCSCHHHHHHHHHHHTSSSSCEEEEECCTTSCHHHHHHHHHHHHHHTCSCGGGTTCEEEEECHHHHH
T ss_pred HHHHHHHcCCCCCCcCcHHHHHHHHHHHhccCCCCeEEEecCCcccHHHHHHHHHHHHhCCCCHHHcCceEEEeeHHHHh
Confidence 3566677788899999999999999999988878899999999999999999999875432 134566666432
Q ss_pred --CCChHhHHHHHHHHHhcccCCCCCCceEEEEeCCCCCCH--------HHHHHHHHHHHHhcCCcEEEEeeCCC-----
Q 020071 87 --DRGIDVVRNKIKMFAQKKVTLPPGKHKVVVLDEADSMTA--------GAQQALRRTMEIYSNSTRFALACNVS----- 151 (331)
Q Consensus 87 --~~~~~~i~~~i~~~~~~~~~~~~~~~~vviide~d~l~~--------~~~~~Ll~~le~~~~~~~~I~~~~~~----- 151 (331)
.....++.+.+......... ..+.-|++|||++.+-. +..+.|..+|+. ....+|.+|+..
T Consensus 91 Ag~~~rG~~E~rl~~il~e~~~--~~~~iILfIDeih~l~~~g~~~g~~d~~~~Lkp~L~r--g~l~~IgatT~eey~~~ 166 (195)
T d1jbka_ 91 AGAKYRGEFEERLKGVLNDLAK--QEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALAR--GELHCVGATTLDEYRQY 166 (195)
T ss_dssp TTTCSHHHHHHHHHHHHHHHHH--STTTEEEEEETGGGGTT------CCCCHHHHHHHHHT--TSCCEEEEECHHHHHHH
T ss_pred ccCCccHHHHHHHHHHHHHHhc--CCCcEEEEcchHHHHhcCCCCCCcccHHHHHHHHHhC--CCceEEecCCHHHHHHH
Confidence 22334565555444432210 22356999999998832 245888889985 567788887642
Q ss_pred CCCChhhhcccceeeecCCCHHHHHHHH
Q 020071 152 SKIIEPIQSRCAIVRFSRLSDEEILSRL 179 (331)
Q Consensus 152 ~~l~~~l~sr~~~i~~~~~~~~~~~~~l 179 (331)
..-.+++.+||+.+.+.+|+.++...+|
T Consensus 167 ~e~d~aL~rrF~~I~V~Ep~~e~t~~IL 194 (195)
T d1jbka_ 167 IEKDAALERRFQKVFVAEPSVEDTIAIL 194 (195)
T ss_dssp TTTCHHHHTTEEEEECCCCCHHHHHTTC
T ss_pred HHcCHHHHhcCCEeecCCCCHHHHHHHh
Confidence 3557999999999999999999877654
No 28
>d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase, BchI {Rhodobacter capsulatus [TaxId: 1061]}
Probab=99.51 E-value=2.9e-13 Score=118.07 Aligned_cols=211 Identities=19% Similarity=0.168 Sum_probs=122.0
Q ss_pred CCC-CCCccccCHHHHHHHHHHHHcCCCCeEEEeCCCCccHHHHHHHHHHHhcC-------CCC----------------
Q 020071 20 RPT-KVCDIVGNLDAVARLGIIARDGNMPNLILAGPPGTGKTTSILALAHELLG-------PNY---------------- 75 (331)
Q Consensus 20 ~p~-~~~~~ig~~~~~~~l~~~l~~~~~~~~ll~G~~G~GKt~la~~l~~~l~~-------~~~---------------- 75 (331)
||. .|.+++||++++..+.-.+-.....|+||+||||+|||++|+.++..+.. ...
T Consensus 1 ~~~~~f~~I~Gq~~~kral~laa~~~~~h~vLl~G~pG~GKT~lar~~~~iLp~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (333)
T d1g8pa_ 1 RPVFPFSAIVGQEDMKLALLLTAVDPGIGGVLVFGDRGTGKSTAVRALAALLPEIEAVEGCPVSSPNVEMIPDWATVLST 80 (333)
T ss_dssp CCCCCGGGSCSCHHHHHHHHHHHHCGGGCCEEEECCGGGCTTHHHHHHHHHSCCEEEETTCTTCCSSGGGSCTTCCCSCC
T ss_pred CCCCChhhccCcHHHHHHHHHHHhccCCCeEEEECCCCccHHHHHHHHHHhCCCchhhccCccccCccccccchhhcccc
Confidence 455 79999999999986655444222236999999999999999999986621 000
Q ss_pred -----CCceEEeecCCC----CChHhHHHHHHHHHhccc--CCCCCCceEEEEeCCCCCCHHHHHHHHHHHHHh------
Q 020071 76 -----REAVMELNASDD----RGIDVVRNKIKMFAQKKV--TLPPGKHKVVVLDEADSMTAGAQQALRRTMEIY------ 138 (331)
Q Consensus 76 -----~~~~~~~~~~~~----~~~~~i~~~i~~~~~~~~--~~~~~~~~vviide~d~l~~~~~~~Ll~~le~~------ 138 (331)
..++........ .+.-.+......-....- ....+.++|+++||++.++++.+++|+..||+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~~~~g~~~~~~G~l~~A~~gvl~iDEi~~~~~~~~~aLl~~me~~~v~i~r 160 (333)
T d1g8pa_ 81 NVIRKPTPVVDLPLGVSEDRVVGALDIERAISKGEKAFEPGLLARANRGYLYIDECNLLEDHIVDLLLDVAQSGENVVER 160 (333)
T ss_dssp CEEEECCCEEEECTTCCHHHHHCEECHHHHHHHCGGGEECCHHHHHTTEEEEETTGGGSCHHHHHHHHHHHHHSEEEECC
T ss_pred CcccccCceeeccCCCCcccccCcchhhhccccCcceeeccccccccccEeecccHHHHHHHHHHHHhhhhcCCeEEecc
Confidence 001111111110 000011111111111000 000134789999999999999999999999963
Q ss_pred -------cCCcEEEEeeCCC-CCCChhhhcccce-eeecCCC-HHHHHHHHHHH--------------------------
Q 020071 139 -------SNSTRFALACNVS-SKIIEPIQSRCAI-VRFSRLS-DEEILSRLMVV-------------------------- 182 (331)
Q Consensus 139 -------~~~~~~I~~~~~~-~~l~~~l~sr~~~-i~~~~~~-~~~~~~~l~~~-------------------------- 182 (331)
|..+.+|.++|.. .++.+++.+|+.. +.+..+. ..+....+...
T Consensus 161 ~g~~~~~p~~f~liaa~Np~~~~l~~~llDRf~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (333)
T d1g8pa_ 161 DGLSIRHPARFVLVGSGNPEEGDLRPQLLDRFGLSVEVLSPRDVETRVEVIRRRDTYDADPKAFLEEWRPKDMDIRNQIL 240 (333)
T ss_dssp TTCCEEEECCEEEEEEECSCSCCCCHHHHTTCSEEEECCCCCSHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCceecCCCCEEEEEecCccccccccchhhhhcceeeccCcchhhHHHHHHHhhhhcccChHHHHHHHHHHHHHHHHHHH
Confidence 3455667776653 6799999999865 4555443 22222221111
Q ss_pred ---HHhcCCCCCHHHHHHHHHhc---C-CCHHHHHHHHHHH-----hhCCCccchhhhhh
Q 020071 183 ---VQEEKVPYVPEGLEAIIFTA---D-GDMRQALNNLQAT-----YSGFRFVNQENVFK 230 (331)
Q Consensus 183 ---~~~~~~~i~~~~~~~l~~~~---~-g~~r~~~~~l~~~-----~~~~~~i~~~~v~~ 230 (331)
..-..+.++++....++... + -++|.....++.+ ..+...|+.+++.+
T Consensus 241 ~~~~~l~~v~~~~~~~~~~~~~~~~~~~~S~R~~~~llrvArtiA~L~gr~~V~~~di~~ 300 (333)
T d1g8pa_ 241 EARERLPKVEAPNTALYDCAALCIALGSDGLRGELTLLRSARALAALEGATAVGRDHLKR 300 (333)
T ss_dssp HHHHHGGGCBCCHHHHHHHHHHHHHSSSCSHHHHHHHHHHHHHHHHHTTCSBCCHHHHHH
T ss_pred HHhhcccceecCHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHcCCCCCCHHHHHH
Confidence 00123455666555544332 2 2677777766533 25677788888765
No 29
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=99.24 E-value=1.6e-10 Score=97.25 Aligned_cols=177 Identities=18% Similarity=0.136 Sum_probs=110.8
Q ss_pred CCCCccccCHHHHHHHHHHHHcCCCCeEEEeCCCCccHHHHHHHHHHHhcCCCCCCceEEeecC--C---CCChH-----
Q 020071 22 TKVCDIVGNLDAVARLGIIARDGNMPNLILAGPPGTGKTTSILALAHELLGPNYREAVMELNAS--D---DRGID----- 91 (331)
Q Consensus 22 ~~~~~~ig~~~~~~~l~~~l~~~~~~~~ll~G~~G~GKt~la~~l~~~l~~~~~~~~~~~~~~~--~---~~~~~----- 91 (331)
..-++++|+++.++++.+. ..++++++||+|+|||++++.+++.+.. .+..++.. . .....
T Consensus 9 ~~~~~f~GR~~el~~l~~~----~~~~i~i~G~~G~GKTsLl~~~~~~~~~-----~~~~i~~~~~~~~~~~~~~~~~~~ 79 (283)
T d2fnaa2 9 DNRKDFFDREKEIEKLKGL----RAPITLVLGLRRTGKSSIIKIGINELNL-----PYIYLDLRKFEERNYISYKDFLLE 79 (283)
T ss_dssp CSGGGSCCCHHHHHHHHHT----CSSEEEEEESTTSSHHHHHHHHHHHHTC-----CEEEEEGGGGTTCSCCCHHHHHHH
T ss_pred CChhhCCChHHHHHHHHhc----cCCEEEEEcCCCCcHHHHHHHHHHHCCC-----CeEEEEeccccccccccHHHHHHH
Confidence 3568899999999988653 3345899999999999999999998732 22222211 0 00011
Q ss_pred ------------------------------------------hHHHHHHHHHhcccCCCCCCceEEEEeCCCCCCHHH--
Q 020071 92 ------------------------------------------VVRNKIKMFAQKKVTLPPGKHKVVVLDEADSMTAGA-- 127 (331)
Q Consensus 92 ------------------------------------------~i~~~i~~~~~~~~~~~~~~~~vviide~d~l~~~~-- 127 (331)
.+.+.++..... ...+.++++||++.+....
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-----~~~~~~i~id~~~~~~~~~~~ 154 (283)
T d2fnaa2 80 LQKEINKLVKRLPSLLKALKNIQGIVIMGNEIKFNWNRKDRLSFANLLESFEQA-----SKDNVIIVLDEAQELVKLRGV 154 (283)
T ss_dssp HHHHHHHHHHHCTTHHHHTTTSTTEEECSSSEEEC-----CCCHHHHHHHHHHT-----CSSCEEEEEETGGGGGGCTTC
T ss_pred HHHHhhhhhhhhHHHHHHHHhhhcccccccccccccchhhhhHHHHHHHHHHhh-----cccccccccchhhhhcccchH
Confidence 112222222211 3456789999998774432
Q ss_pred --HHHHHHHHHHhcCCcEEEEeeCCCC---------CCC-hhhhcccceeeecCCCHHHHHHHHHHHHHhcCCCCCHHHH
Q 020071 128 --QQALRRTMEIYSNSTRFALACNVSS---------KII-EPIQSRCAIVRFSRLSDEEILSRLMVVVQEEKVPYVPEGL 195 (331)
Q Consensus 128 --~~~Ll~~le~~~~~~~~I~~~~~~~---------~l~-~~l~sr~~~i~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~ 195 (331)
...+...... ...+.+++++.... ... +....+...+.+.|++.++..+++.+.+...++..+ .+
T Consensus 155 ~~~~~l~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~l~~~e~~~~l~~~~~~~~~~~~--~~ 231 (283)
T d2fnaa2 155 NLLPALAYAYDN-LKRIKFIMSGSEMGLLYDYLRVEDPESPLFGRAFSTVELKPFSREEAIEFLRRGFQEADIDFK--DY 231 (283)
T ss_dssp CCHHHHHHHHHH-CTTEEEEEEESSHHHHHHHTTTTCTTSTTTTCCCEEEEECCCCHHHHHHHHHHHHHHHTCCCC--CH
T ss_pred HHHHHHHHHHHh-hhhhhhhhccccchHHHHHHHhhhhcchhcccceeEEeeCCCCHHHHHHHHHhhhhhcCCCHH--HH
Confidence 2334444443 34555666543311 111 222234567899999999999999998887776554 46
Q ss_pred HHHHHhcCCCHHHHHHHHHH
Q 020071 196 EAIIFTADGDMRQALNNLQA 215 (331)
Q Consensus 196 ~~l~~~~~g~~r~~~~~l~~ 215 (331)
+.+.+.++|.|..+......
T Consensus 232 ~~i~~~~~G~P~~L~~~~~~ 251 (283)
T d2fnaa2 232 EVVYEKIGGIPGWLTYFGFI 251 (283)
T ss_dssp HHHHHHHCSCHHHHHHHHHH
T ss_pred HHHHHHhCCCHHHHHHHHHH
Confidence 89999999999865544443
No 30
>d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase domain {Simian virus 40 [TaxId: 10633]}
Probab=99.20 E-value=3.1e-11 Score=105.29 Aligned_cols=150 Identities=15% Similarity=0.041 Sum_probs=90.8
Q ss_pred eEEEeCCCCccHHHHHHHHHHHhcCCCCCCceEEeecCCCCChHhHHHHHHHHHhcccCCCCCCceEEEEeCCCCCCH--
Q 020071 48 NLILAGPPGTGKTTSILALAHELLGPNYREAVMELNASDDRGIDVVRNKIKMFAQKKVTLPPGKHKVVVLDEADSMTA-- 125 (331)
Q Consensus 48 ~~ll~G~~G~GKt~la~~l~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~vviide~d~l~~-- 125 (331)
.++||||||+|||++|+++++.+ +.+++.+|+++..+...++.. .+..+.++|+++....
T Consensus 156 ~~~~~g~~~~gk~~~~~~~~~~~-----~~~~i~in~s~~rs~~~l~~~-------------~~~~~~l~d~~~~~~~~~ 217 (362)
T d1svma_ 156 YWLFKGPIDSGKTTLAAALLELC-----GGKALNVNLPLDRLNFELGVA-------------IDQFLVVFEDVKGTGGES 217 (362)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHH-----CCEEECCSSCTTTHHHHHGGG-------------TTCSCEEETTCCCSTTTT
T ss_pred eEEEECCCCCCHHHHHHHHHHHc-----CCCEEEEECcchhhHHHHHhH-------------HHHHHHHHHHHHHhhhhc
Confidence 38999999999999999999999 778999998876432221111 1233445555543320
Q ss_pred ---------HHHHHHHHHHHHhc--------------CCcEEEEeeCCCC-CCChhhhcccceeeecCCCHHHHHHHHHH
Q 020071 126 ---------GAQQALRRTMEIYS--------------NSTRFALACNVSS-KIIEPIQSRCAIVRFSRLSDEEILSRLMV 181 (331)
Q Consensus 126 ---------~~~~~Ll~~le~~~--------------~~~~~I~~~~~~~-~l~~~l~sr~~~i~~~~~~~~~~~~~l~~ 181 (331)
+..+.|...++... ...++|+|||+.. .+...++.++.++.+.|+.......++..
T Consensus 218 ~~~~~~~~~DeiD~l~~~~dg~~~~~~~~~~~~~~~~~~~p~i~ttN~~~~~~~r~~Rf~~~i~~~~~~~~~~~~~~l~~ 297 (362)
T d1svma_ 218 RDLPSGQGINNLDNLRDYLDGSVKVNLEKKHLNKRTQIFPPGIVTMNEYSVPKTLQARFVKQIDFRPKDYLKHCLERSEF 297 (362)
T ss_dssp TTCCCCSHHHHHHTTHHHHHCSSCEEECCSSSCCEEECCCCEEEEECSCCCCHHHHTTEEEEEECCCCHHHHHHHHTCTH
T ss_pred cCCCCeEEEehHhhcccccCCcchhhhhhhhhchhhhccCCceeecccccccccccccCceEEeecCCCcHHHHHHHHHH
Confidence 11223444444211 1124788888642 22223333444555555555556677777
Q ss_pred HHHhcCCCCCHHHHHH-HHHhcCCCHHHHHHHHHH
Q 020071 182 VVQEEKVPYVPEGLEA-IIFTADGDMRQALNNLQA 215 (331)
Q Consensus 182 ~~~~~~~~i~~~~~~~-l~~~~~g~~r~~~~~l~~ 215 (331)
.++++.+.++.+.+.. +...+++|++.+++.+..
T Consensus 298 i~~~~~l~~~~~~L~~li~~~s~~D~~~~i~~~~~ 332 (362)
T d1svma_ 298 LLEKRIIQSGIALLLMLIWYRPVAEFAQSIQSRIV 332 (362)
T ss_dssp HHHTTCTTCHHHHHHHHHHHSCGGGSCGGGHHHHH
T ss_pred HhcccCCCCCHHHHHHHccCCCHHHHHHHHHHHHH
Confidence 8888888877766544 446677788887776543
No 31
>d1w44a_ c.37.1.11 (A:) NTPase P4 {Bacteriophage phi-12 [TaxId: 161736]}
Probab=99.11 E-value=2.6e-10 Score=96.92 Aligned_cols=119 Identities=18% Similarity=0.193 Sum_probs=77.7
Q ss_pred EEEeCCCCccHHHHHHHHHHHhcCCCCCCceEEeecCCCCC------hHhHHHHHHHHHhcccCCCCCCceEEEEeCCCC
Q 020071 49 LILAGPPGTGKTTSILALAHELLGPNYREAVMELNASDDRG------IDVVRNKIKMFAQKKVTLPPGKHKVVVLDEADS 122 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l~~~~~~~~~~~~~~~~~~~------~~~i~~~i~~~~~~~~~~~~~~~~vviide~d~ 122 (331)
+|||||||||||.+|++++..+.. ..+++.+++++..+ ...+++.++.... ..|+||||+|.
T Consensus 126 ~l~~G~pG~GKT~la~ala~~~~~---~~~~~~~~~~~~~~~~~G~~e~~~~~~f~~a~~---------~~ilf~DEid~ 193 (321)
T d1w44a_ 126 VIVTGKGNSGKTPLVHALGEALGG---KDKYATVRFGEPLSGYNTDFNVFVDDIARAMLQ---------HRVIVIDSLKN 193 (321)
T ss_dssp EEEECSSSSCHHHHHHHHHHHHHT---TSCCEEEEBSCSSTTCBCCHHHHHHHHHHHHHH---------CSEEEEECCTT
T ss_pred EEEECCCCccHHHHHHHHHHHhcC---CCCeEEEEhhHhhhcccchHHHHHHHHHHHHhh---------ccEEEeehhhh
Confidence 678999999999999999999842 35677788776532 3455665555432 24999999999
Q ss_pred CCH------------HHHHHHHHHHHH--hcCCcEEEEeeCCCCCCChhhhc------cc-ceeeecCCCHHHHHHHHH
Q 020071 123 MTA------------GAQQALRRTMEI--YSNSTRFALACNVSSKIIEPIQS------RC-AIVRFSRLSDEEILSRLM 180 (331)
Q Consensus 123 l~~------------~~~~~Ll~~le~--~~~~~~~I~~~~~~~~l~~~l~s------r~-~~i~~~~~~~~~~~~~l~ 180 (331)
+.. ...+.|+.-|+. ...++.+|.+|| +..+.+++.. |+ ..+.+.+|+.++-.+++.
T Consensus 194 ~~~~r~~~~~~~~~~r~v~~lL~e~dg~~~~~~v~viaatN-~~~~~~~i~~~~~r~~Rf~~~v~v~~pd~~~r~~il~ 271 (321)
T d1w44a_ 194 VIGAAGGNTTSGGISRGAFDLLSDIGAMAASRGCVVIASLN-PTSNDDKIVELVKEASRSNSTSLVISTDVDGEWQVLT 271 (321)
T ss_dssp TC-----------CCHHHHHHHHHHHHHHHHHTCEEEEECC-CCCCCHHHHHHHHHHHHHSCSEEEEECSSTTEEEEEE
T ss_pred hccccccCCCCCcchhhhhhhhhhccccccCCCeEEEEeCC-CcccccchhhhhhccCcccceeecCCCChHHHHHHHH
Confidence 843 224566666652 234567777776 5656565542 32 456777777666555443
No 32
>d1iqpa1 a.80.1.1 (A:233-327) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=99.09 E-value=1.2e-09 Score=76.02 Aligned_cols=91 Identities=23% Similarity=0.434 Sum_probs=84.1
Q ss_pred CHHHHHHHHHHHHcCCHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHhcccChHhHHHHHHHHHHHHHHHhcCCCchHHH
Q 020071 236 HPLHVKNMVRNVLEGKFDDACSGLKQL-YDLGYSPTDIITTLFRIIKNYEMAEHLKLEFMKEAGFAHMRICDGVGSYLQL 314 (331)
Q Consensus 236 ~~~~i~~l~~~~~~~~~~~~~~~l~~l-~~~g~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~l~l 314 (331)
.++.+.++++.+.++++.++...+.++ ...|+++.+|+..+.+.+.+..+|+..+.+++..++++++++..|++++++|
T Consensus 3 ~P~~I~~il~~~l~~~f~~a~~~l~~l~~~~G~s~~dIl~~l~~~v~~~~~~~~~k~~ll~~la~~d~rL~~G~~e~iQL 82 (95)
T d1iqpa1 3 RPEDIREMMLLALKGNFLKAREKLREILLKQGLSGEDVLVQMHKEVFNLPIEEPKKVLLADKIGEYNFRLVEGANEIIQL 82 (95)
T ss_dssp CHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHGGGSSSCHHHHHHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred CcHHHHHHHHHHHcCCHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHcCCChHHHH
Confidence 456788999999999999999999997 5679999999999999888878999999999999999999999999999999
Q ss_pred HHHHHHHHHHHh
Q 020071 315 CGLLAKLSIVRE 326 (331)
Q Consensus 315 ~~l~~~l~~~~~ 326 (331)
+.|+.+++.+-+
T Consensus 83 ~alla~~~~i~~ 94 (95)
T d1iqpa1 83 EALLAQFTLIGK 94 (95)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHhc
Confidence 999999997653
No 33
>d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain {Caenorhabditis elegans [TaxId: 6239]}
Probab=99.05 E-value=5.1e-09 Score=88.07 Aligned_cols=177 Identities=14% Similarity=0.066 Sum_probs=105.7
Q ss_pred ccccCHHHHHHHHHHHHcC-CC-Ce-EEEeCCCCccHHHHHHHHHHHhcCC-CCCC-ceEEeecCCCCChHhHHHHHHHH
Q 020071 26 DIVGNLDAVARLGIIARDG-NM-PN-LILAGPPGTGKTTSILALAHELLGP-NYRE-AVMELNASDDRGIDVVRNKIKMF 100 (331)
Q Consensus 26 ~~ig~~~~~~~l~~~l~~~-~~-~~-~ll~G~~G~GKt~la~~l~~~l~~~-~~~~-~~~~~~~~~~~~~~~i~~~i~~~ 100 (331)
+++|++..+..+..++.+. .. .. +.+||..|+|||++|+.+.+..... ...+ .++.++.........+...+...
T Consensus 21 ~~~gR~~~~~~i~~~L~~~~~~~~~~v~I~GmgGiGKTtLA~~v~~~~~~~~~~~f~~~~Wv~vs~~~~~~~l~~~~~~~ 100 (277)
T d2a5yb3 21 TCYIREYHVDRVIKKLDEMCDLDSFFLFLHGRAGSGKSVIASQALSKSDQLIGINYDSIVWLKDSGTAPKSTFDLFTDIL 100 (277)
T ss_dssp CSCCCHHHHHHHHHHHHHHTTSSSEEEEEECSTTSSHHHHHHHHHHHCSSTBTTTBSEEEEEECCCCSTTHHHHHHHHHH
T ss_pred ceeCcHHHHHHHHHHHHhccCCCceEEEEECCCCCCHHHHHHHHHHhhhhhhhhcCceEEEEEecCCCCHHHHHHHHHHH
Confidence 4679999999998888642 22 22 6899999999999999998864321 1111 22333333222222222222111
Q ss_pred Hhccc-----C-------------------CCCCCceEEEEeCCCCCCHHHHHHHHHHHHHhcCCcEEEEeeCCCCCCCh
Q 020071 101 AQKKV-----T-------------------LPPGKHKVVVLDEADSMTAGAQQALRRTMEIYSNSTRFALACNVSSKIIE 156 (331)
Q Consensus 101 ~~~~~-----~-------------------~~~~~~~vviide~d~l~~~~~~~Ll~~le~~~~~~~~I~~~~~~~~l~~ 156 (331)
..... . ...+++-++|+|++... ... +.+.. ..+++|+||.+. .+..
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~kr~LlVLDDv~~~--~~~----~~~~~--~~srilvTTR~~-~v~~ 171 (277)
T d2a5yb3 101 LMLKSEDDLLNFPSVEHVTSVVLKRMICNALIDRPNTLFVFDDVVQE--ETI----RWAQE--LRLRCLVTTRDV-EISN 171 (277)
T ss_dssp HHHTTTSCCTTCCCCTTCCHHHHHHHHHHHHTTSTTEEEEEEEECCH--HHH----HHHHH--TTCEEEEEESBG-GGGG
T ss_pred HHHhcchhhcCCccchhhhhHHHHHHHHHHHhccCCeeEecchhhHH--hhh----hhhcc--cCceEEEEeehH-HHHH
Confidence 11000 0 00245679999998742 222 22322 356777777644 4445
Q ss_pred hhhcccceeeecCCCHHHHHHHHHHHHHhcCC-CCCHHHHHHHHHhcCCCHHHHHH
Q 020071 157 PIQSRCAIVRFSRLSDEEILSRLMVVVQEEKV-PYVPEGLEAIIFTADGDMRQALN 211 (331)
Q Consensus 157 ~l~sr~~~i~~~~~~~~~~~~~l~~~~~~~~~-~i~~~~~~~l~~~~~g~~r~~~~ 211 (331)
.+...+..+.+.+++.++..+.+...+..... .-.++..+.+++.++|.|-.+.-
T Consensus 172 ~~~~~~~~~~l~~L~~~ea~~Lf~~~~~~~~~~~~~~~~~~~iv~~c~GlPLAl~~ 227 (277)
T d2a5yb3 172 AASQTCEFIEVTSLEIDECYDFLEAYGMPMPVGEKEEDVLNKTIELSSGNPATLMM 227 (277)
T ss_dssp GCCSCEEEEECCCCCHHHHHHHHHHTSCCCC--CHHHHHHHHHHHHHTTCHHHHHH
T ss_pred hcCCCCceEECCCCCHHHHHHHHHHHhCCccCchhhHHHHHHHHHHhCCCHHHHHH
Confidence 55666778999999999999999765432221 11245568899999999865443
No 34
>d1sxjc1 a.80.1.1 (C:239-333) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.97 E-value=6.8e-09 Score=72.16 Aligned_cols=92 Identities=20% Similarity=0.401 Sum_probs=82.5
Q ss_pred CCHHHHHHHHHHHHcCCHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHhcccC-hHhHHHHHHHHHHHHHHHhcCCCchH
Q 020071 235 PHPLHVKNMVRNVLEGKFDDACSGLKQLY-DLGYSPTDIITTLFRIIKNYEMA-EHLKLEFMKEAGFAHMRICDGVGSYL 312 (331)
Q Consensus 235 ~~~~~i~~l~~~~~~~~~~~~~~~l~~l~-~~g~~~~~i~~~l~~~~~~~~~~-~~~~~~~~~~l~~~~~~l~~~~~~~l 312 (331)
++++.+.++++.+.++++.+|...+.+++ ..|+++.+|+..+.+.+.....+ ...+..++..++++++|+..|+++++
T Consensus 1 P~P~~I~~il~~~l~~~f~~a~~~l~~l~~~~G~s~~dIl~~l~~~i~~~~~~~~~~k~~ll~~la~~e~rL~~G~~e~l 80 (95)
T d1sxjc1 1 PRPSDLKAVLKSILEDDWGTAHYTLNKVRSAKGLALIDLIEGIVKILEDYELQNEETRVHLLTKLADIEYSISKGGNDQI 80 (95)
T ss_dssp CCHHHHHHHHHHHHTSCHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTTSCCSSHHHHHHHHHHHHHHHHHHTTCCCHHH
T ss_pred CCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHcCCCcHH
Confidence 35677889999999999999999999986 56999999999999998887754 56678999999999999999999999
Q ss_pred HHHHHHHHHHHHHh
Q 020071 313 QLCGLLAKLSIVRE 326 (331)
Q Consensus 313 ~l~~l~~~l~~~~~ 326 (331)
+|..|+..+++..+
T Consensus 81 QL~~lla~~~~~~e 94 (95)
T d1sxjc1 81 QGSAVIGAIKASFE 94 (95)
T ss_dssp HHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999987654
No 35
>d1sxjd1 a.80.1.1 (D:263-353) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.96 E-value=4.1e-09 Score=72.71 Aligned_cols=88 Identities=20% Similarity=0.277 Sum_probs=80.3
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHH-HhcccChHhHHHHHHHHHHHHHHHhcCCCchHHHH
Q 020071 237 PLHVKNMVRNVLEGKFDDACSGLKQLYDLGYSPTDIITTLFRII-KNYEMAEHLKLEFMKEAGFAHMRICDGVGSYLQLC 315 (331)
Q Consensus 237 ~~~i~~l~~~~~~~~~~~~~~~l~~l~~~g~~~~~i~~~l~~~~-~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~l~l~ 315 (331)
++.+.++++.+.++++.++...+.+++..|++..+|+..+++.+ ....+|+..+.+++..+++++.|+..|++++++|.
T Consensus 3 ~~~i~~il~~~~~~~f~~a~~~i~~l~~~Gys~~dIl~~l~~~vv~~~~i~~~~k~~i~~~la~~d~rL~~G~~e~lQL~ 82 (91)
T d1sxjd1 3 HDILIEIVEKVKSGDFDEIKKYVNTFMKSGWSAASVVNQLHEYYITNDNFDTNFKNQISWLLFTTDSRLNNGTNEHIQLL 82 (91)
T ss_dssp SHHHHHHHHHHHSCCHHHHHHHHHHHHHTSCCCTTHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHTTCCCHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHcCCChHHHHH
Confidence 35678899999999999999999999999999999999999864 44558999999999999999999999999999999
Q ss_pred HHHHHHHHH
Q 020071 316 GLLAKLSIV 324 (331)
Q Consensus 316 ~l~~~l~~~ 324 (331)
.++.+++++
T Consensus 83 ~lla~i~~i 91 (91)
T d1sxjd1 83 NLLVKISQL 91 (91)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHcC
Confidence 999999863
No 36
>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=98.88 E-value=4.1e-08 Score=87.47 Aligned_cols=56 Identities=29% Similarity=0.473 Sum_probs=44.7
Q ss_pred ccccCHHHHHHHHHHHHc--------C------CCCeEEEeCCCCccHHHHHHHHHHHhcCCCCCCceEEeecCC
Q 020071 26 DIVGNLDAVARLGIIARD--------G------NMPNLILAGPPGTGKTTSILALAHELLGPNYREAVMELNASD 86 (331)
Q Consensus 26 ~~ig~~~~~~~l~~~l~~--------~------~~~~~ll~G~~G~GKt~la~~l~~~l~~~~~~~~~~~~~~~~ 86 (331)
-+|||+++++.+.-++.+ . ..+|+|+.||+|||||.+|+.+|+.+ +.||+.++++.
T Consensus 15 yVvGQ~~AKk~lsvav~nhyrR~~~~~~~~~ei~ksNILliGPTGvGKTlLAr~LAk~l-----~VPFv~~daT~ 84 (443)
T d1g41a_ 15 HIIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLA-----NAPFIKVEATK 84 (443)
T ss_dssp TCCSCHHHHHHHHHHHHHHHHHHHSCTTTTTTCCCCCEEEECCTTSSHHHHHHHHHHHT-----TCCEEEEEGGG
T ss_pred cccCcHHHHHHHHHHHHHHHHHhhcccccccccccccEEEECCCCCCHHHHHHHHHHHh-----CCCEEEeecce
Confidence 379999999988766632 1 13359999999999999999999998 77787776643
No 37
>d1sxjb1 a.80.1.1 (B:231-322) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.82 E-value=3.2e-08 Score=68.09 Aligned_cols=88 Identities=47% Similarity=0.818 Sum_probs=76.2
Q ss_pred CHHHHHHHHHHHHcCCHHHHHHHHHH-HHHcCCCHHHHHHHHHHHHHhc-ccChHhHHHHHHHHHHHHHHHhcCCCchHH
Q 020071 236 HPLHVKNMVRNVLEGKFDDACSGLKQ-LYDLGYSPTDIITTLFRIIKNY-EMAEHLKLEFMKEAGFAHMRICDGVGSYLQ 313 (331)
Q Consensus 236 ~~~~i~~l~~~~~~~~~~~~~~~l~~-l~~~g~~~~~i~~~l~~~~~~~-~~~~~~~~~~~~~l~~~~~~l~~~~~~~l~ 313 (331)
++..+.+++ ..+++.+|+..+.+ ++..|++..+|+..+++.+... .+++..+.+++..++++++|+..|++++++
T Consensus 2 ~P~~I~~il---~~~~f~~a~~~l~~~l~~~Gys~~DIi~~l~~~i~~~~~~~e~~k~~il~~la~~~~rl~~G~~e~lQ 78 (92)
T d1sxjb1 2 HPLIVKKML---LASNLEDSIQILRTDLWKKGYSSIDIVTTSFRVTKNLAQVKESVRLEMIKEIGLTHMRILEGVGTYLQ 78 (92)
T ss_dssp CHHHHHHHH---SCSSHHHHHHHHHHTTTTTTCCHHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHHHHHHTTCCCHHH
T ss_pred CHHHHHHHH---HhCCHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcCCCcHHH
Confidence 344555553 57789999999988 5578999999999999999886 478889999999999999999999999999
Q ss_pred HHHHHHHHHHHHh
Q 020071 314 LCGLLAKLSIVRE 326 (331)
Q Consensus 314 l~~l~~~l~~~~~ 326 (331)
|..|+.+++++..
T Consensus 79 L~~lla~i~~i~~ 91 (92)
T d1sxjb1 79 LASMLAKIHKLNN 91 (92)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhc
Confidence 9999999998753
No 38
>d1jqlb_ c.37.1.20 (B:) delta subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=98.59 E-value=1.3e-07 Score=70.58 Aligned_cols=125 Identities=10% Similarity=0.021 Sum_probs=91.6
Q ss_pred HHHHHHHcCCCCeEEEeCCCCccHHHHHHHHHHHhcCCCCCCceEEeecCCCCChHhHHHHHHHHHhcccCCCCCCceEE
Q 020071 36 RLGIIARDGNMPNLILAGPPGTGKTTSILALAHELLGPNYREAVMELNASDDRGIDVVRNKIKMFAQKKVTLPPGKHKVV 115 (331)
Q Consensus 36 ~l~~~l~~~~~~~~ll~G~~G~GKt~la~~l~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~vv 115 (331)
.|.+.++++-.|-++|||++..-+..+...+.+.+..++......... .....+.+.+..+.+.++ ++++++|
T Consensus 8 ~L~~~l~k~l~~vyll~G~E~~L~~~~~~~i~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~t~sl---F~~krli 80 (140)
T d1jqlb_ 8 QLRAQLNEGLRAAYLLLGNDPLLLQESQDAVRQVAAAQGFEEHHTFSI----DPNTDWNAIFSLCQAMSL---FASRQTL 80 (140)
T ss_dssp GHHHHHHHCCCSEEEEESSCHHHHHHHHHHHHHHHHHTTCCEEECCCC----STTCCHHHHHHHHHCCCT---TCCCEEE
T ss_pred HHHHHHhcCCCcEEEEEcChHHHHHHHHHHHHHHHHhCCcceeeeecc----cccCCHHHHHHHHcCCCc---ccCcEEE
Confidence 466677766434369999999999999999988876543332221111 122357788888888887 8999999
Q ss_pred EEeCCCCC-CHHHHHHHHHHHHHhcCCcEEEEeeCCC------CCCChhhhcccceeee
Q 020071 116 VLDEADSM-TAGAQQALRRTMEIYSNSTRFALACNVS------SKIIEPIQSRCAIVRF 167 (331)
Q Consensus 116 iide~d~l-~~~~~~~Ll~~le~~~~~~~~I~~~~~~------~~l~~~l~sr~~~i~~ 167 (331)
+|++++.. ++...+.|.++++.|++++.+|+.++.. .++.+++.+++.++.+
T Consensus 81 ~i~~~~~~~~k~~~~~L~~~~~~~~~~~~lii~~~~~~k~~~~~k~~K~l~k~g~vI~C 139 (140)
T d1jqlb_ 81 LLLLPENGPNAAINEQLLTLTGLLHDDLLLIVRGNKLSKAQENAAWFTALANRSVQVTC 139 (140)
T ss_dssp EEECCTTCSCTTHHHHHHHHHHHCCSSCCEEEECSSCCTTGGGSHHHHHHGGGCEEEEC
T ss_pred EEEcCCCCCcHHHHHHHHHHHhCCCCCEEEEEEcCCCCchhhhhHHHHHHHhCCeEEeC
Confidence 99998755 4666788999999999999999987653 3456777777777765
No 39
>d1tuea_ c.37.1.20 (A:) Replication protein E1 helicase domain {Human papillomavirus type 18 [TaxId: 333761]}
Probab=98.39 E-value=1.4e-06 Score=67.74 Aligned_cols=116 Identities=21% Similarity=0.281 Sum_probs=71.4
Q ss_pred HHHHHHHHHHcCCCCe-EEEeCCCCccHHHHHHHHHHHhcCCCCCCceEEeecCCCCChHhHHHHHHHHHhcccCCCCCC
Q 020071 33 AVARLGIIARDGNMPN-LILAGPPGTGKTTSILALAHELLGPNYREAVMELNASDDRGIDVVRNKIKMFAQKKVTLPPGK 111 (331)
Q Consensus 33 ~~~~l~~~l~~~~~~~-~ll~G~~G~GKt~la~~l~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~ 111 (331)
.+..|+.++++..-.+ ++|+||+++|||.++.++.+-+. ..++.++.... .+.-.+ ..+
T Consensus 39 Fl~~l~~~l~~~PKkn~i~~~GP~~TGKS~f~~sl~~~l~-----G~vis~~N~~s-----------~F~Lq~----l~~ 98 (205)
T d1tuea_ 39 FLGALKSFLKGTPKKNCLVFCGPANTGKSYFGMSFIHFIQ-----GAVISFVNSTS-----------HFWLEP----LTD 98 (205)
T ss_dssp HHHHHHHHHHTCTTCSEEEEESCGGGCHHHHHHHHHHHHT-----CEECCCCCSSS-----------CGGGGG----GTT
T ss_pred HHHHHHHHHcCCCCceEEEEECCCCccHHHHHHHHHHHhC-----CEEEeccCCCC-----------Cccccc----ccC
Confidence 3456677775432223 89999999999999999999883 22222221111 011112 245
Q ss_pred ceEEEEeCCCCCCHHHHHH-HHHHHHHhc-------------CCcEEEEeeCCC---CCCChhhhcccceeeec
Q 020071 112 HKVVVLDEADSMTAGAQQA-LRRTMEIYS-------------NSTRFALACNVS---SKIIEPIQSRCAIVRFS 168 (331)
Q Consensus 112 ~~vviide~d~l~~~~~~~-Ll~~le~~~-------------~~~~~I~~~~~~---~~l~~~l~sr~~~i~~~ 168 (331)
.+++++||+......-.+. +..+++.-+ .-..+|+++|.. ..-.+.|.+|..++.|+
T Consensus 99 ~kv~l~dD~t~~~~~~~d~~lK~ll~G~~vsvd~KhK~~vqi~~pPliITsN~~~~~~d~~~~L~sRi~~f~F~ 172 (205)
T d1tuea_ 99 TKVAMLDDATTTCWTYFDTYMRNALDGNPISIDRKHKPLIQLKCPPILLTTNIHPAKDNRWPYLESRITVFEFP 172 (205)
T ss_dssp CSSEEEEEECHHHHHHHHHHCHHHHHTCCEEEC----CCEEECCCCEEEEESSCTTSSSSCHHHHTSCEEEECC
T ss_pred CeEEEEeccccchHHHHHHHHHhccCCCeeeeecccCCcccccCCCEEEEcCCCCCccccchhhhheEEEEECC
Confidence 7899999986654443344 455665211 123477787763 34457899999999887
No 40
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Probab=98.35 E-value=2.9e-07 Score=71.46 Aligned_cols=25 Identities=36% Similarity=0.624 Sum_probs=22.5
Q ss_pred eEEEeCCCCccHHHHHHHHHHHhcC
Q 020071 48 NLILAGPPGTGKTTSILALAHELLG 72 (331)
Q Consensus 48 ~~ll~G~~G~GKt~la~~l~~~l~~ 72 (331)
++++.||+|+||||+++.++..+..
T Consensus 2 ki~I~G~~G~GKSTLl~~i~~~l~~ 26 (178)
T d1ye8a1 2 KIIITGEPGVGKTTLVKKIVERLGK 26 (178)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHGG
T ss_pred EEEEECCCCcHHHHHHHHHHhcCCC
Confidence 4899999999999999999998853
No 41
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]}
Probab=98.24 E-value=3e-07 Score=76.44 Aligned_cols=57 Identities=23% Similarity=0.305 Sum_probs=39.6
Q ss_pred CCccccCHHHHHHHHHHHHc---CCCCe-EEEeCCCCccHHHHHHHHHHHhcCCCCCCceEEeecC
Q 020071 24 VCDIVGNLDAVARLGIIARD---GNMPN-LILAGPPGTGKTTSILALAHELLGPNYREAVMELNAS 85 (331)
Q Consensus 24 ~~~~ig~~~~~~~l~~~l~~---~~~~~-~ll~G~~G~GKt~la~~l~~~l~~~~~~~~~~~~~~~ 85 (331)
|.|.-+++.....+...... ...|. +||+||||+|||++|++++..+ ..+++.++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ilL~GpPGtGKT~la~~la~~~-----~~~~~~i~~d 66 (273)
T d1gvnb_ 6 FTDKQFENRLNDNLEELIQGKKAVESPTAFLLGGQPGSGKTSLRSAIFEET-----QGNVIVIDND 66 (273)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCCCCSSCEEEEEECCTTSCTHHHHHHHHHHT-----TTCCEEECTH
T ss_pred cChHHHHHHHHHHHHHHHhcccCCCCCEEEEEECCCCCCHHHHHHHHHHHh-----hcceEEEecH
Confidence 33444445555555555433 34445 8999999999999999999998 5567777753
No 42
>d1jr3d1 a.80.1.1 (D:212-338) delta subunit {Escherichia coli [TaxId: 562]}
Probab=98.07 E-value=7e-06 Score=59.71 Aligned_cols=84 Identities=20% Similarity=0.151 Sum_probs=69.8
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhc-------------------c---------------
Q 020071 239 HVKNMVRNVLEGKFDDACSGLKQLYDLGYSPTDIITTLFRIIKNY-------------------E--------------- 284 (331)
Q Consensus 239 ~i~~l~~~~~~~~~~~~~~~l~~l~~~g~~~~~i~~~l~~~~~~~-------------------~--------------- 284 (331)
++|++++++..+|...++..+.+|...|++|..++..+.+..+.+ +
T Consensus 2 ~~F~L~dai~~gd~~~a~~il~~l~~~g~~~~~il~~l~~~~~~l~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 81 (127)
T d1jr3d1 2 TPFHWVDALLMGKSKRALHILQQLRLEGSEPVILLRTLQRELLLLVNLKRQSAHTPLRALFDKHRVWQNRRGMMGEALNR 81 (127)
T ss_dssp CHHHHHHHHTTSCHHHHHHHHTSSTTTTCCHHHHHHHHHHHHHHHHHHHTCSSSSCHHHHHHHHTCCSSHHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHhhccCCHHHHHHHcCCCHHHHHHHHHHHHh
Confidence 479999999999999999999999999999999998887644431 1
Q ss_pred cChHhHHHHHHHHHHHHHHHhcC--CCchHHHHHHHHHHH
Q 020071 285 MAEHLKLEFMKEAGFAHMRICDG--VGSYLQLCGLLAKLS 322 (331)
Q Consensus 285 ~~~~~~~~~~~~l~~~~~~l~~~--~~~~l~l~~l~~~l~ 322 (331)
++...+.+++..+.++|..+|.+ .++...||.+++++|
T Consensus 82 ~s~~~l~~~l~~l~~~D~~~K~~~~~~~~~~le~l~l~lc 121 (127)
T d1jr3d1 82 LSQTQLRQAVQLLTRTELTLKQDYGQSVWAELEGLSLLLC 121 (127)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHSSCSCHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHh
Confidence 23333359999999999999954 477899999999998
No 43
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.00 E-value=6.4e-06 Score=63.69 Aligned_cols=27 Identities=41% Similarity=0.637 Sum_probs=23.9
Q ss_pred CeEEEeCCCCccHHHHHHHHHHHhcCC
Q 020071 47 PNLILAGPPGTGKTTSILALAHELLGP 73 (331)
Q Consensus 47 ~~~ll~G~~G~GKt~la~~l~~~l~~~ 73 (331)
.|++|+||+|+|||++++.+++.+...
T Consensus 2 k~v~ItG~~GtGKTtl~~~i~~~l~~~ 28 (189)
T d2i3ba1 2 RHVFLTGPPGVGKTTLIHKASEVLKSS 28 (189)
T ss_dssp CCEEEESCCSSCHHHHHHHHHHHHHHT
T ss_pred cEEEEECCCCCcHHHHHHHHHHHHHHC
Confidence 369999999999999999999998543
No 44
>d1jr3a1 a.80.1.1 (A:243-368) gamma subunit {Escherichia coli [TaxId: 562]}
Probab=97.95 E-value=7.6e-05 Score=53.91 Aligned_cols=93 Identities=4% Similarity=0.009 Sum_probs=78.5
Q ss_pred CHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhc------c--------------------cChHh
Q 020071 236 HPLHVKNMVRNVLEGKFDDACSGLKQLYDLGYSPTDIITTLFRIIKNY------E--------------------MAEHL 289 (331)
Q Consensus 236 ~~~~i~~l~~~~~~~~~~~~~~~l~~l~~~g~~~~~i~~~l~~~~~~~------~--------------------~~~~~ 289 (331)
..+.++++++++.++|..+++..++++...|.++..++..+..+++++ + ++...
T Consensus 3 D~~~~~~L~~~I~~~d~~~~L~~l~~i~~~G~d~~~~l~~L~~~~r~l~~~k~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 82 (126)
T d1jr3a1 3 DDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAALGNDMAAIELRMRELARTIPPTD 82 (126)
T ss_dssp CHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHTTCTTCCCSGGGGTHHHHHHHHHHSCHHH
T ss_pred CHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhcccccccchHHHHHHHHHHHHcCCHHH
Confidence 346789999999999999999999999999999999999888766642 0 23344
Q ss_pred HHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHhhh
Q 020071 290 KLEFMKEAGFAHMRICDGVGSYLQLCGLLAKLSIVRETA 328 (331)
Q Consensus 290 ~~~~~~~l~~~~~~l~~~~~~~l~l~~l~~~l~~~~~~~ 328 (331)
+..+++.+.++...++...++++.+|..++|+.......
T Consensus 83 L~~~~~il~~~~~~ik~s~~~r~~~Em~llrll~~~~~~ 121 (126)
T d1jr3a1 83 IQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPRM 121 (126)
T ss_dssp HHHHHHHHHHHHHHTTTSSSHHHHHHHHHHHHHHTCSSS
T ss_pred HHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHcCCCC
Confidence 568899999999999999999999999999987655443
No 45
>d1a1va1 c.37.1.14 (A:190-325) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=97.92 E-value=2.1e-05 Score=57.78 Aligned_cols=39 Identities=18% Similarity=0.276 Sum_probs=26.1
Q ss_pred CCceEEEEeCCCCCCHHHHHHHHHHHHH--hcCCcEEEEee
Q 020071 110 GKHKVVVLDEADSMTAGAQQALRRTMEI--YSNSTRFALAC 148 (331)
Q Consensus 110 ~~~~vviide~d~l~~~~~~~Ll~~le~--~~~~~~~I~~~ 148 (331)
.+..+|||||+|.+..+....+...++. +.+...+++.|
T Consensus 93 ~~~~~vIiDE~H~~~~~~~~~~~~~l~~~~~~~~~~~l~~T 133 (136)
T d1a1va1 93 GAYDIIICDECHSTDATSILGIGTVLDQAETAGARLVVLAT 133 (136)
T ss_dssp CCCSEEEEETTTCCSHHHHHHHHHHHHHTTTTTCSEEEEEE
T ss_pred hcCCEEEEecccccCHHHHHHHHHHHHHHHHCCCCcEEEEe
Confidence 4578999999999988776666666653 22344444443
No 46
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal recognition particle receptor FtsY {Thermotoga maritima [TaxId: 2336]}
Probab=97.91 E-value=3.1e-05 Score=61.22 Aligned_cols=91 Identities=21% Similarity=0.251 Sum_probs=51.2
Q ss_pred CCCe-EEEeCCCCccHHHHHHHHHHHhcCCCCCCceEEeecCCCCChHhHHHHHHHHHhcccCC----------------
Q 020071 45 NMPN-LILAGPPGTGKTTSILALAHELLGPNYREAVMELNASDDRGIDVVRNKIKMFAQKKVTL---------------- 107 (331)
Q Consensus 45 ~~~~-~ll~G~~G~GKt~la~~l~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~---------------- 107 (331)
..|+ ++|.||+|+||||.+-.+|..+...+...-++..+.......++++..-+... .++..
T Consensus 9 ~~p~vi~lvGptGvGKTTTiAKLAa~~~~~~~kV~lit~Dt~R~gA~eQL~~~a~~l~-i~~~~~~~~~d~~~~~~~~~~ 87 (213)
T d1vmaa2 9 EPPFVIMVVGVNGTGKTTSCGKLAKMFVDEGKSVVLAAADTFRAAAIEQLKIWGERVG-ATVISHSEGADPAAVAFDAVA 87 (213)
T ss_dssp SSCEEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHT-CEEECCSTTCCHHHHHHHHHH
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEeecccccchhHHHHHHhhhcC-ccccccCCCCcHHHHHHHHHH
Confidence 4466 69999999999999888888876554444444444332222233332211111 00000
Q ss_pred --CCCCceEEEEeCCCCCCHH--HHHHHHHHHH
Q 020071 108 --PPGKHKVVVLDEADSMTAG--AQQALRRTME 136 (331)
Q Consensus 108 --~~~~~~vviide~d~l~~~--~~~~Ll~~le 136 (331)
...++.+|+||=+.+.+.+ ..+.|.++.+
T Consensus 88 ~~~~~~~d~ilIDTaGr~~~d~~~~~el~~~~~ 120 (213)
T d1vmaa2 88 HALARNKDVVIIDTAGRLHTKKNLMEELRKVHR 120 (213)
T ss_dssp HHHHTTCSEEEEEECCCCSCHHHHHHHHHHHHH
T ss_pred HHHHcCCCEEEEeccccccchHHHHHHHHHHHh
Confidence 0234679999998877543 3455555554
No 47
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3' phosphatase, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=97.91 E-value=2.3e-05 Score=60.20 Aligned_cols=82 Identities=16% Similarity=0.125 Sum_probs=49.8
Q ss_pred EEEeCCCCccHHHHHHHHHHHhcCCCCCCceEEeecCCCCChHhHHHHHHHHHhcccCCCCCCceEEEEeCCCCCCHHHH
Q 020071 49 LILAGPPGTGKTTSILALAHELLGPNYREAVMELNASDDRGIDVVRNKIKMFAQKKVTLPPGKHKVVVLDEADSMTAGAQ 128 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~vviide~d~l~~~~~ 128 (331)
++++|+||+||||+|+.++... + +..++..+........+.+..... .+..||+|... ......
T Consensus 17 iil~G~pGsGKST~a~~l~~~~-----~--~~~i~~D~~~~~~~~~~~~~~~l~--------~g~~vIiD~t~-~~~~~R 80 (172)
T d1yj5a2 17 VVAVGFPGAGKSTFIQEHLVSA-----G--YVHVNRDTLGSWQRCVSSCQAALR--------QGKRVVIDNTN-PDVPSR 80 (172)
T ss_dssp EEEECCTTSSHHHHHHHHTGGG-----T--CEEEEHHHHCSHHHHHHHHHHHHH--------TTCCEEEESCC-CSHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHhc-----C--CEEEchHHHHHHHHHHHHHHHHHH--------CCCCceeeCcC-CCHHHH
Confidence 6999999999999999887654 3 344444333333333333333322 24567788654 456666
Q ss_pred HHHHHHHHHhcCCcEEEE
Q 020071 129 QALRRTMEIYSNSTRFAL 146 (331)
Q Consensus 129 ~~Ll~~le~~~~~~~~I~ 146 (331)
..+....++..-.+.+|.
T Consensus 81 ~~~~~~a~~~~~~~~~v~ 98 (172)
T d1yj5a2 81 ARYIQCAKDAGVPCRCFN 98 (172)
T ss_dssp HHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHhcCCCEEEEE
Confidence 777777776554444443
No 48
>d1w36d1 c.37.1.19 (D:2-360) Exodeoxyribonuclease V alpha chain (RecD) {Escherichia coli [TaxId: 562]}
Probab=97.90 E-value=2.8e-05 Score=66.91 Aligned_cols=118 Identities=16% Similarity=0.195 Sum_probs=62.5
Q ss_pred CHHHHHHHHHHHHcCCCCeEEEeCCCCccHHHHHHHHHHHhcCC--CCCCceEEeecCCCCChHhHHHHHHHHHhc-c--
Q 020071 30 NLDAVARLGIIARDGNMPNLILAGPPGTGKTTSILALAHELLGP--NYREAVMELNASDDRGIDVVRNKIKMFAQK-K-- 104 (331)
Q Consensus 30 ~~~~~~~l~~~l~~~~~~~~ll~G~~G~GKt~la~~l~~~l~~~--~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~-~-- 104 (331)
.+.....+...+.+ +-.+++||||||||+++..+...+... ..+..+.-.. +.....+.+.+.+...... .
T Consensus 150 ~~~Q~~A~~~al~~---~~~vI~G~pGTGKTt~i~~~l~~l~~~~~~~~~~I~l~A-pTgkAA~~L~e~~~~~~~~~~~~ 225 (359)
T d1w36d1 150 INWQKVAAAVALTR---RISVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAA-PTGKAAARLTESLGKALRQLPLT 225 (359)
T ss_dssp CCHHHHHHHHHHTB---SEEEEECCTTSTHHHHHHHHHHHHHHTCSSCCCCEEEEB-SSHHHHHHHHHHHTHHHHHSSCC
T ss_pred ccHHHHHHHHHHcC---CeEEEEcCCCCCceehHHHHHHHHHHHHhccCCeEEEec-CcHHHHHHHHHHHHHHHhhcCch
Confidence 34455556666643 236999999999999887765554321 1122222222 2211122222222111000 0
Q ss_pred --------------------------c---CCCCCCceEEEEeCCCCCCHHHHHHHHHHHHHhcCCcEEEEeeCCCCCCC
Q 020071 105 --------------------------V---TLPPGKHKVVVLDEADSMTAGAQQALRRTMEIYSNSTRFALACNVSSKII 155 (331)
Q Consensus 105 --------------------------~---~~~~~~~~vviide~d~l~~~~~~~Ll~~le~~~~~~~~I~~~~~~~~l~ 155 (331)
+ .....+..++||||+..++..... .++...+.++++|++.+ +..|+
T Consensus 226 ~~~~~~~~~~~~t~~~ll~~~~~~~~~~~~~~~~l~~d~lIIDEaSmv~~~l~~---~ll~~~~~~~~lILvGD-~~QLp 301 (359)
T d1w36d1 226 DEQKKRIPEDASTLHRLLGAQPGSQRLRHHAGNPLHLDVLVVDEASMIDLPMMS---RLIDALPDHARVIFLGD-RDQLA 301 (359)
T ss_dssp SCCCCSCSCCCBTTTSCC-----------CTTSCCSCSEEEECSGGGCBHHHHH---HHHHTCCTTCEEEEEEC-TTSGG
T ss_pred hhhhhhhhhhhhHHHHHHhhhhcchHHHHhhhcccccceeeehhhhccCHHHHH---HHHHHhcCCCEEEEECC-hhhcc
Confidence 0 000123579999999998876544 44444567789999874 44443
No 49
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]}
Probab=97.89 E-value=7.1e-05 Score=55.70 Aligned_cols=22 Identities=27% Similarity=0.437 Sum_probs=19.9
Q ss_pred EEEeCCCCccHHHHHHHHHHHh
Q 020071 49 LILAGPPGTGKTTSILALAHEL 70 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l 70 (331)
++++|+||+||||+|+.+.+..
T Consensus 5 Iii~G~pGsGKTTla~~L~~~~ 26 (152)
T d1ly1a_ 5 ILTIGCPGSGKSTWAREFIAKN 26 (152)
T ss_dssp EEEECCTTSSHHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHHhC
Confidence 6899999999999999988765
No 50
>d1u0ja_ c.37.1.20 (A:) Rep 40 protein helicase domain {Adeno-associated virus 2, AAV2 [TaxId: 10804]}
Probab=97.86 E-value=4.3e-05 Score=62.79 Aligned_cols=112 Identities=16% Similarity=0.115 Sum_probs=68.5
Q ss_pred HHHHHHHHcCCCCe--EEEeCCCCccHHHHHHHHHHHhcCCCCCCceEEeecCCCCChHhHHHHHHHHHhcccCCCCCCc
Q 020071 35 ARLGIIARDGNMPN--LILAGPPGTGKTTSILALAHELLGPNYREAVMELNASDDRGIDVVRNKIKMFAQKKVTLPPGKH 112 (331)
Q Consensus 35 ~~l~~~l~~~~~~~--~ll~G~~G~GKt~la~~l~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~ 112 (331)
..+..++.++.... ++|+||+++|||+++..+.+.+ +. +..++..... +.-.+ -.+.
T Consensus 91 ~~l~~~L~~~~~k~n~~~l~G~~~tGKS~f~~~i~~~l-----g~-~~~~~~~~~~-----------f~l~~----l~~k 149 (267)
T d1u0ja_ 91 SVFLGWATKKFGKRNTIWLFGPATTGKTNIAEAIAHTV-----PF-YGCVNWTNEN-----------FPFND----CVDK 149 (267)
T ss_dssp HHHHHHHTTCSTTCCEEEEECSTTSSHHHHHHHHHHHS-----SC-EEECCTTCSS-----------CTTGG----GSSC
T ss_pred HHHHHHHcCCCCccEEEEEEcCCCCCHHHHHHHHHHHh-----cc-hhhccccCCC-----------ccccc----cCCC
Confidence 45566665543333 7999999999999999999987 21 2222222110 00111 2468
Q ss_pred eEEEEeCCCCCCHHHHHHHHHHHHH--------------hcCCcEEEEeeCCCCC----------CChhhhcccceeeec
Q 020071 113 KVVVLDEADSMTAGAQQALRRTMEI--------------YSNSTRFALACNVSSK----------IIEPIQSRCAIVRFS 168 (331)
Q Consensus 113 ~vviide~d~l~~~~~~~Ll~~le~--------------~~~~~~~I~~~~~~~~----------l~~~l~sr~~~i~~~ 168 (331)
+++++||+..-. ...+.+..++.. ..+...+|+++|+... -...+++|...+.|.
T Consensus 150 ~~~~~~e~~~~~-~~~~~~K~l~gGd~i~v~~K~k~~~~~~~~p~li~s~n~i~~~~~~~~~~~~~~~~l~~R~~~~~F~ 228 (267)
T d1u0ja_ 150 MVIWWEEGKMTA-KVVESAKAILGGSKVRVDQKCKSSAQIDPTPVIVTSNTNMCAVIDGNSTTFEHQQPLQDRMFKFELT 228 (267)
T ss_dssp SEEEECSCCEET-TTHHHHHHHHTTCCEEC------CCEECCCCEEEEESSCTTCEEETTEEECTTHHHHHTTEEEEECC
T ss_pred EEEEEeCCCccc-cHHHHHHHhcCCCceEeecccCCCcEeeCCeEEEEeCCCcccccCCCccccccchHhhhhEEEEECC
Confidence 899999986543 334556666542 1234567777766543 246899998887665
No 51
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli [TaxId: 562]}
Probab=97.85 E-value=4.4e-05 Score=60.15 Aligned_cols=32 Identities=34% Similarity=0.529 Sum_probs=25.9
Q ss_pred CCCCe-EEEeCCCCccHHHHHHHHHHHhcCCCC
Q 020071 44 GNMPN-LILAGPPGTGKTTSILALAHELLGPNY 75 (331)
Q Consensus 44 ~~~~~-~ll~G~~G~GKt~la~~l~~~l~~~~~ 75 (331)
++.|+ ++|.||+|+||||.+-.+|..+..++.
T Consensus 6 ~~~p~vi~lvGptGvGKTTTiAKLA~~~~~~g~ 38 (211)
T d2qy9a2 6 GKAPFVILMVGVNGVGKTTTIGKLARQFEQQGK 38 (211)
T ss_dssp SCTTEEEEEECCTTSCHHHHHHHHHHHHHTTTC
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCC
Confidence 45577 589999999999999999988765543
No 52
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]}
Probab=97.83 E-value=5.5e-06 Score=63.42 Aligned_cols=31 Identities=39% Similarity=0.590 Sum_probs=26.6
Q ss_pred CCeEEEeCCCCccHHHHHHHHHHHhcCCCCCCceEE
Q 020071 46 MPNLILAGPPGTGKTTSILALAHELLGPNYREAVME 81 (331)
Q Consensus 46 ~~~~ll~G~~G~GKt~la~~l~~~l~~~~~~~~~~~ 81 (331)
.|.++|.||||+||||+++.+++.+ +.+++.
T Consensus 4 ~~~I~i~G~pGsGKTTia~~La~~l-----~~~~i~ 34 (173)
T d1rkba_ 4 LPNILLTGTPGVGKTTLGKELASKS-----GLKYIN 34 (173)
T ss_dssp CCCEEEECSTTSSHHHHHHHHHHHH-----CCEEEE
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHH-----CCcEEe
Confidence 4668999999999999999999998 555554
No 53
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus [TaxId: 271]}
Probab=97.80 E-value=0.00011 Score=57.76 Aligned_cols=101 Identities=15% Similarity=0.141 Sum_probs=54.9
Q ss_pred EEEeCCCCccHHHHHHHHHHHhcCCCCCCceEEeecCCCCChHhHHHHHHHHHhcccC-C-----------------CCC
Q 020071 49 LILAGPPGTGKTTSILALAHELLGPNYREAVMELNASDDRGIDVVRNKIKMFAQKKVT-L-----------------PPG 110 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~-~-----------------~~~ 110 (331)
++|.||+|+||||.+-.+|..+...+....++..+.......++++..-+... .++. . ...
T Consensus 9 i~lvGptGvGKTTTiaKLA~~~~~~g~kV~lit~Dt~R~gA~eQL~~~a~~l~-i~~~~~~~~~d~~~~~~~~~~~~~~~ 87 (207)
T d1okkd2 9 VLVVGVNGVGKTTTIAKLGRYYQNLGKKVMFCAGDTFRAAGGTQLSEWGKRLS-IPVIQGPEGTDPAALAYDAVQAMKAR 87 (207)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHHTTTCCEEEECCCCSSTTHHHHHHHHHHHHT-CCEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEEeccccccchhhHhhcccccC-ceEEeccCCccHHHHHHHHHHHHHHC
Confidence 69999999999999888988876554433333333333333333333221111 1100 0 012
Q ss_pred CceEEEEeCCCCCCH--HHHHHHHHHHHH-------hcCCcEEEEeeCC
Q 020071 111 KHKVVVLDEADSMTA--GAQQALRRTMEI-------YSNSTRFALACNV 150 (331)
Q Consensus 111 ~~~vviide~d~l~~--~~~~~Ll~~le~-------~~~~~~~I~~~~~ 150 (331)
++.+|+||=+.+... +....|.++.+. .|..+.+++.++.
T Consensus 88 ~~d~ilIDTaGr~~~d~~l~~el~~~~~~~~~~~~~~p~~~~LVl~a~~ 136 (207)
T d1okkd2 88 GYDLLFVDTAGRLHTKHNLMEELKKVKRAIAKADPEEPKEVWLVLDAVT 136 (207)
T ss_dssp TCSEEEECCCCCCTTCHHHHHHHHHHHHHHHHHCTTCCSEEEEEEETTB
T ss_pred CCCEEEcCccccchhhHHHHHHHHHHHHHhhhcccCCCceEEEEeeccc
Confidence 467999999987753 334444444432 2345555655443
No 54
>d1yksa1 c.37.1.14 (A:185-324) YFV helicase domain {Yellow fever virus [TaxId: 11089]}
Probab=97.76 E-value=1.8e-05 Score=58.07 Aligned_cols=39 Identities=13% Similarity=0.115 Sum_probs=24.3
Q ss_pred CCCceEEEEeCCCCCCHHHHH--HHHHHHHHhcCCcEEEEee
Q 020071 109 PGKHKVVVLDEADSMTAGAQQ--ALRRTMEIYSNSTRFALAC 148 (331)
Q Consensus 109 ~~~~~vviide~d~l~~~~~~--~Ll~~le~~~~~~~~I~~~ 148 (331)
..+..+||+||+|.+++.... .+...+...+ ++.+|+.|
T Consensus 96 ~~~~~lvIiDEaH~~~~~~~~~~~~~~~~~~~~-~~~~l~lT 136 (140)
T d1yksa1 96 VVNWEVIIMDEAHFLDPASIAARGWAAHRARAN-ESATILMT 136 (140)
T ss_dssp CCCCSEEEETTTTCCSHHHHHHHHHHHHHHHTT-SCEEEEEC
T ss_pred ccceeEEEEccccccChhhHHHHHHHHHHhhCC-CCCEEEEE
Confidence 456889999999999766432 3334443333 45555544
No 55
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]}
Probab=97.74 E-value=1.1e-05 Score=61.05 Aligned_cols=29 Identities=38% Similarity=0.575 Sum_probs=25.4
Q ss_pred eEEEeCCCCccHHHHHHHHHHHhcCCCCCCceEE
Q 020071 48 NLILAGPPGTGKTTSILALAHELLGPNYREAVME 81 (331)
Q Consensus 48 ~~ll~G~~G~GKt~la~~l~~~l~~~~~~~~~~~ 81 (331)
+++|.||+|+||||+++.+++.+ +.+++.
T Consensus 4 ~I~l~G~~GsGKSTvak~La~~L-----~~~~id 32 (169)
T d1kaga_ 4 NIFLVGPMGAGKSTIGRQLAQQL-----NMEFYD 32 (169)
T ss_dssp CEEEECCTTSCHHHHHHHHHHHT-----TCEEEE
T ss_pred eEEEECCCCCCHHHHHHHHHHHh-----CCCeEe
Confidence 58999999999999999999999 555654
No 56
>d1sxje1 a.80.1.1 (E:256-354) Replication factor C5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=97.71 E-value=0.00041 Score=46.83 Aligned_cols=74 Identities=15% Similarity=0.118 Sum_probs=62.4
Q ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHh-cccChHhHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHH
Q 020071 252 FDDACSGLKQLYDLGYSPTDIITTLFRIIKN-YEMAEHLKLEFMKEAGFAHMRICDGVGSYLQLCGLLAKLSIVR 325 (331)
Q Consensus 252 ~~~~~~~l~~l~~~g~~~~~i~~~l~~~~~~-~~~~~~~~~~~~~~l~~~~~~l~~~~~~~l~l~~l~~~l~~~~ 325 (331)
..+.+..+++|+..+.+|..|+..+...... .+.+...+.+++...+.++.|++.|..+..+||.|+.+++.++
T Consensus 24 L~~iR~~lYeLL~~cIpp~~Ilk~L~~~Ll~~~~~d~~lk~eii~~aa~yE~Rl~~GsK~IfHLEaFvAkfM~~l 98 (99)
T d1sxje1 24 LIECRAVLYDLLAHCIPANIILKELTFSLLDVETLNTTNKSSIIEYSSVFDERLSLGNKAIFHLEGFIAKVMCCL 98 (99)
T ss_dssp HHHHHHHHHHHHTTTCCHHHHHHHHHHTTTTCTTSCHHHHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHhhc
Confidence 3456778889999999999999888654422 2356777889999999999999999999999999999999876
No 57
>d2fz4a1 c.37.1.19 (A:24-229) DNA repair protein RAD25 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=97.69 E-value=6.3e-05 Score=59.41 Aligned_cols=111 Identities=16% Similarity=0.176 Sum_probs=62.6
Q ss_pred cccCHHHHHHHHHHHHcCCCCeEEEeCCCCccHHHHHHHHHHHhcCCCCCCceEEeecCCCCChHhHHHHHHHHHhccc-
Q 020071 27 IVGNLDAVARLGIIARDGNMPNLILAGPPGTGKTTSILALAHELLGPNYREAVMELNASDDRGIDVVRNKIKMFAQKKV- 105 (331)
Q Consensus 27 ~ig~~~~~~~l~~~l~~~~~~~~ll~G~~G~GKt~la~~l~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~- 105 (331)
+--++...+.+..++.++ +.++.+|+|+|||.++..++..+. ..++.+.+.. .-.+++.+.++.+.....
T Consensus 69 ~~Lr~yQ~eav~~~~~~~---~~ll~~~tG~GKT~~a~~~~~~~~-----~~~Liv~p~~-~L~~q~~~~~~~~~~~~~~ 139 (206)
T d2fz4a1 69 ISLRDYQEKALERWLVDK---RGCIVLPTGSGKTHVAMAAINELS-----TPTLIVVPTL-ALAEQWKERLGIFGEEYVG 139 (206)
T ss_dssp CCCCHHHHHHHHHHTTTS---EEEEEESSSTTHHHHHHHHHHHSC-----SCEEEEESSH-HHHHHHHHHHGGGCGGGEE
T ss_pred CCcCHHHHHHHHHHHhCC---CcEEEeCCCCCceehHHhHHHHhc-----CceeEEEccc-chHHHHHHHHHhhcccchh
Confidence 445666777777666443 468889999999999988888773 2233222211 111222222221111000
Q ss_pred ------------------------CCCCCCceEEEEeCCCCCCHHHHHHHHHHHHHhcCCcEEEEeeC
Q 020071 106 ------------------------TLPPGKHKVVVLDEADSMTAGAQQALRRTMEIYSNSTRFALACN 149 (331)
Q Consensus 106 ------------------------~~~~~~~~vviide~d~l~~~~~~~Ll~~le~~~~~~~~I~~~~ 149 (331)
.....+..+||+||+|.+..+ .+.++++..+...++.++++
T Consensus 140 ~~~~~~~~~~~i~i~t~~~~~~~~~~~~~~~~lvIiDEaH~~~a~---~~~~i~~~~~~~~~lgLTAT 204 (206)
T d2fz4a1 140 EFSGRIKELKPLTVSTYDSAYVNAEKLGNRFMLLIFDEVHHLPAE---SYVQIAQMSIAPFRLGLTAT 204 (206)
T ss_dssp EESSSCBCCCSEEEEEHHHHHHTHHHHTTTCSEEEEECSSCCCTT---THHHHHHTCCCSEEEEEEES
T ss_pred hcccccccccccccceehhhhhhhHhhCCcCCEEEEECCeeCCcH---HHHHHHhccCCCcEEEEecC
Confidence 000245679999999999744 34555665555556666654
No 58
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=97.69 E-value=1.2e-05 Score=61.24 Aligned_cols=32 Identities=34% Similarity=0.583 Sum_probs=27.6
Q ss_pred CeEEEeCCCCccHHHHHHHHHHHhcCCCCCCceEEee
Q 020071 47 PNLILAGPPGTGKTTSILALAHELLGPNYREAVMELN 83 (331)
Q Consensus 47 ~~~ll~G~~G~GKt~la~~l~~~l~~~~~~~~~~~~~ 83 (331)
|.++|.|++|+||||+++.+++.+ +.+|++.+
T Consensus 2 p~IvliG~~G~GKSTig~~La~~l-----~~~fiD~D 33 (165)
T d2iyva1 2 PKAVLVGLPGSGKSTIGRRLAKAL-----GVGLLDTD 33 (165)
T ss_dssp CSEEEECSTTSSHHHHHHHHHHHH-----TCCEEEHH
T ss_pred CcEEEECCCCCCHHHHHHHHHHHh-----CCCeEeec
Confidence 568888999999999999999999 77777543
No 59
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]}
Probab=97.68 E-value=0.00012 Score=57.75 Aligned_cols=103 Identities=17% Similarity=0.284 Sum_probs=51.9
Q ss_pred CCCe-EEEeCCCCccHHHHHHHHHHHhcCCCCCCceEEeecCCCCChHhHHHH--------------------HHHHHhc
Q 020071 45 NMPN-LILAGPPGTGKTTSILALAHELLGPNYREAVMELNASDDRGIDVVRNK--------------------IKMFAQK 103 (331)
Q Consensus 45 ~~~~-~ll~G~~G~GKt~la~~l~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~--------------------i~~~~~~ 103 (331)
+.|+ ++|.||+|+||||.+-.+|..+...+....++..+.......++++.. +......
T Consensus 10 k~p~vi~lvGptGvGKTTTiAKLA~~~~~~g~kV~lit~Dt~R~ga~eQL~~~a~~l~v~~~~~~~~~~~~~~~~~a~~~ 89 (211)
T d1j8yf2 10 KIPYVIMLVGVQGTGKATTAGKLAYFYKKKGFKVGLVGADVYRPAALEQLQQLGQQIGVPVYGEPGEKDVVGIAKRGVEK 89 (211)
T ss_dssp SSSEEEEEECSCCC----HHHHHHHHHHHTTCCEEEEECCCSSHHHHHHHHHHHHHHTCCEECCTTCCCHHHHHHHHHHH
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEEeeccccchhHHHHHhccccCcceeecccchhhhHHHHHHHHH
Confidence 4567 589999999999998888887765444433344333222222222221 1111111
Q ss_pred ccCCCCCCceEEEEeCCCCCCHH----HHHHHHHHHHHhcC-CcEEEEeeCC
Q 020071 104 KVTLPPGKHKVVVLDEADSMTAG----AQQALRRTMEIYSN-STRFALACNV 150 (331)
Q Consensus 104 ~~~~~~~~~~vviide~d~l~~~----~~~~Ll~~le~~~~-~~~~I~~~~~ 150 (331)
.. ..+..+|+||=+.+.+.+ ..+.|.++.+...+ .+.+++.++.
T Consensus 90 ~~---~~~~d~IlIDTaGr~~~~~~~~~~~el~~~~~~~~~~~~~LVl~a~~ 138 (211)
T d1j8yf2 90 FL---SEKMEIIIVDTAGRHGYGEEAALLEEMKNIYEAIKPDEVTLVIDASI 138 (211)
T ss_dssp HH---HTTCSEEEEECCCSCCTTCHHHHHHHHHHHHHHHCCSEEEEEEEGGG
T ss_pred hh---ccCCceEEEecCCcCccchhhHHHHHHHHHHhhcCCceEEEEEeccc
Confidence 00 234689999988775322 23455556654433 4455555443
No 60
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi [TaxId: 556]}
Probab=97.66 E-value=4.3e-05 Score=58.38 Aligned_cols=30 Identities=27% Similarity=0.344 Sum_probs=26.2
Q ss_pred eEEEeCCCCccHHHHHHHHHHHhcCCCCCCceEEe
Q 020071 48 NLILAGPPGTGKTTSILALAHELLGPNYREAVMEL 82 (331)
Q Consensus 48 ~~ll~G~~G~GKt~la~~l~~~l~~~~~~~~~~~~ 82 (331)
+++|.|++|+||||+++.+++.+ +.+++..
T Consensus 4 ~Iil~G~~GsGKSTia~~LA~~L-----g~~~id~ 33 (170)
T d1e6ca_ 4 PIFMVGARGCGMTTVGRELARAL-----GYEFVDT 33 (170)
T ss_dssp CEEEESCTTSSHHHHHHHHHHHH-----TCEEEEH
T ss_pred CEEEECCCCCCHHHHHHHHHHHh-----CCCEEeh
Confidence 47888999999999999999999 7777753
No 61
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]}
Probab=97.66 E-value=0.0002 Score=56.25 Aligned_cols=99 Identities=19% Similarity=0.207 Sum_probs=52.1
Q ss_pred EEEeCCCCccHHHHHHHHHHHhcCCCCCCceEEeecCCCCChHhHHHHHHHHHhcccCC------------------CCC
Q 020071 49 LILAGPPGTGKTTSILALAHELLGPNYREAVMELNASDDRGIDVVRNKIKMFAQKKVTL------------------PPG 110 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~------------------~~~ 110 (331)
++|.||+|+||||.+-.+|..+...+...-++..+.......++++..-+... .++.. ...
T Consensus 13 i~lvGp~GvGKTTTiaKLA~~~~~~g~kV~lit~Dt~R~gA~eQL~~~a~~l~-v~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (207)
T d1ls1a2 13 WFLVGLQGSGKTTTAAKLALYYKGKGRRPLLVAADTQRPAAREQLRLLGEKVG-VPVLEVMDGESPESIRRRVEEKARLE 91 (207)
T ss_dssp EEEECCTTTTHHHHHHHHHHHHHHTTCCEEEEECCSSCHHHHHHHHHHHHHHT-CCEEECCTTCCHHHHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEecccccchHHHHHHHHHHhcC-CccccccccchhhHHHHHHHHHHhhc
Confidence 58999999999999999998886554433233322221111122221111100 00000 013
Q ss_pred CceEEEEeCCCCCC--HHHHHHHHHHHHHhcC-CcEEEEee
Q 020071 111 KHKVVVLDEADSMT--AGAQQALRRTMEIYSN-STRFALAC 148 (331)
Q Consensus 111 ~~~vviide~d~l~--~~~~~~Ll~~le~~~~-~~~~I~~~ 148 (331)
+..+|+||=+.+.. ....+.|.++.+...+ .+.+++.+
T Consensus 92 ~~d~vlIDTaGr~~~d~~~~~el~~~~~~~~~~~~llv~~a 132 (207)
T d1ls1a2 92 ARDLILVDTAGRLQIDEPLMGELARLKEVLGPDEVLLVLDA 132 (207)
T ss_dssp TCCEEEEECCCCSSCCHHHHHHHHHHHHHHCCSEEEEEEEG
T ss_pred cCcceeecccccchhhhhhHHHHHHHHhhcCCceEEEEecc
Confidence 45789999887764 3455666666665443 33344433
No 62
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]}
Probab=97.59 E-value=0.00014 Score=56.65 Aligned_cols=22 Identities=27% Similarity=0.623 Sum_probs=21.2
Q ss_pred EEEeCCCCccHHHHHHHHHHHh
Q 020071 49 LILAGPPGTGKTTSILALAHEL 70 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l 70 (331)
+++.||||+||||+|+.+++.+
T Consensus 9 I~i~G~pGSGKsT~a~~La~~~ 30 (194)
T d1qf9a_ 9 VFVLGGPGSGKGTQCANIVRDF 30 (194)
T ss_dssp EEEEESTTSSHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHH
Confidence 6999999999999999999988
No 63
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]}
Probab=97.58 E-value=3e-05 Score=59.04 Aligned_cols=26 Identities=31% Similarity=0.538 Sum_probs=23.1
Q ss_pred CCCe-EEEeCCCCccHHHHHHHHHHHh
Q 020071 45 NMPN-LILAGPPGTGKTTSILALAHEL 70 (331)
Q Consensus 45 ~~~~-~ll~G~~G~GKt~la~~l~~~l 70 (331)
..++ ++|+|++|+||||+++.+++.+
T Consensus 4 ~~~~iivl~G~~GsGKsT~a~~La~~l 30 (171)
T d1knqa_ 4 HDHHIYVLMGVSGSGKSAVASEVAHQL 30 (171)
T ss_dssp TTSEEEEEECSTTSCHHHHHHHHHHHH
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHh
Confidence 3456 6999999999999999999998
No 64
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]}
Probab=97.57 E-value=2e-05 Score=60.79 Aligned_cols=23 Identities=22% Similarity=0.351 Sum_probs=21.9
Q ss_pred eEEEeCCCCccHHHHHHHHHHHh
Q 020071 48 NLILAGPPGTGKTTSILALAHEL 70 (331)
Q Consensus 48 ~~ll~G~~G~GKt~la~~l~~~l 70 (331)
.++|.||+|+||||+|+.|++.+
T Consensus 9 ~I~i~G~~GsGKTTla~~La~~~ 31 (192)
T d1lw7a2 9 TVAILGGESSGKSVLVNKLAAVF 31 (192)
T ss_dssp EEEEECCTTSHHHHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHHHh
Confidence 38999999999999999999998
No 65
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni [TaxId: 197]}
Probab=97.52 E-value=2.9e-05 Score=58.83 Aligned_cols=30 Identities=33% Similarity=0.497 Sum_probs=26.5
Q ss_pred eEEEeCCCCccHHHHHHHHHHHhcCCCCCCceEEe
Q 020071 48 NLILAGPPGTGKTTSILALAHELLGPNYREAVMEL 82 (331)
Q Consensus 48 ~~ll~G~~G~GKt~la~~l~~~l~~~~~~~~~~~~ 82 (331)
+++|.|++|+||||+++.+++.+ +.+|+..
T Consensus 2 ~I~liG~~GsGKsTi~k~La~~l-----~~~~~d~ 31 (161)
T d1viaa_ 2 NIVFIGFMGSGKSTLARALAKDL-----DLVFLDS 31 (161)
T ss_dssp CEEEECCTTSCHHHHHHHHHHHH-----TCEEEEH
T ss_pred cEEEECCCCCCHHHHHHHHHHHh-----CCCEEec
Confidence 47888999999999999999999 7777754
No 66
>d1bifa1 c.37.1.7 (A:37-249) 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=97.46 E-value=9.2e-05 Score=58.33 Aligned_cols=26 Identities=31% Similarity=0.408 Sum_probs=22.9
Q ss_pred Ce-EEEeCCCCccHHHHHHHHHHHhcC
Q 020071 47 PN-LILAGPPGTGKTTSILALAHELLG 72 (331)
Q Consensus 47 ~~-~ll~G~~G~GKt~la~~l~~~l~~ 72 (331)
|. ++++|.||+||||+|+.+++.+..
T Consensus 2 p~li~l~GlpgsGKSTla~~L~~~l~~ 28 (213)
T d1bifa1 2 PTLIVMVGLPARGKTYISKKLTRYLNF 28 (213)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHHHHHH
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHh
Confidence 45 699999999999999999998853
No 67
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.41 E-value=4.9e-05 Score=59.13 Aligned_cols=25 Identities=40% Similarity=0.509 Sum_probs=22.4
Q ss_pred EEEeCCCCccHHHHHHHHHHHhcCC
Q 020071 49 LILAGPPGTGKTTSILALAHELLGP 73 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l~~~ 73 (331)
++|+|+||+||||+|+.+++.+...
T Consensus 22 I~L~G~pGSGKTTiAk~La~~l~~~ 46 (195)
T d1x6va3 22 VWLTGLSGAGKTTVSMALEEYLVCH 46 (195)
T ss_dssp EEEESSCHHHHHHHHHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHHHHHHhc
Confidence 5899999999999999999998544
No 68
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]}
Probab=97.40 E-value=6.1e-05 Score=57.08 Aligned_cols=36 Identities=33% Similarity=0.434 Sum_probs=28.3
Q ss_pred CCeEEEeCCCCccHHHHHHHHHHHhcCCCCCCceEE
Q 020071 46 MPNLILAGPPGTGKTTSILALAHELLGPNYREAVME 81 (331)
Q Consensus 46 ~~~~ll~G~~G~GKt~la~~l~~~l~~~~~~~~~~~ 81 (331)
.|.+.|+|++|+||||+++.+++.+...+....++.
T Consensus 2 ~Pvi~itG~~GSGKTTL~~~L~~~l~~~g~~v~v~~ 37 (170)
T d1np6a_ 2 IPLLAFAAWSGTGKTTLLKKLIPALCARGIRPGLIK 37 (170)
T ss_dssp CCEEEEECCTTSCHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCEEEEEcCCCCCHHHHHHHHHHHHHHCCCeEEEec
Confidence 466899999999999999999999865544433333
No 69
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]}
Probab=97.38 E-value=7e-05 Score=57.10 Aligned_cols=22 Identities=32% Similarity=0.492 Sum_probs=21.3
Q ss_pred EEEeCCCCccHHHHHHHHHHHh
Q 020071 49 LILAGPPGTGKTTSILALAHEL 70 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l 70 (331)
++|+|++|+||||+|+.+++.+
T Consensus 6 I~l~G~~GsGKsTva~~L~~~l 27 (178)
T d1qhxa_ 6 IILNGGSSAGKSGIVRCLQSVL 27 (178)
T ss_dssp EEEECCTTSSHHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHHHc
Confidence 7999999999999999999998
No 70
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=97.38 E-value=4.1e-05 Score=58.50 Aligned_cols=31 Identities=35% Similarity=0.521 Sum_probs=26.6
Q ss_pred EEEeCCCCccHHHHHHHHHHHhcCCCCCCceEEeec
Q 020071 49 LILAGPPGTGKTTSILALAHELLGPNYREAVMELNA 84 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l~~~~~~~~~~~~~~ 84 (331)
++|.||+|+||||+++.+++.+ +.+++.++.
T Consensus 7 I~l~G~~GsGKSTia~~La~~l-----g~~~~~~~~ 37 (176)
T d1zp6a1 7 LLLSGHPGSGKSTIAEALANLP-----GVPKVHFHS 37 (176)
T ss_dssp EEEEECTTSCHHHHHHHHHTCS-----SSCEEEECT
T ss_pred EEEECCCCCCHHHHHHHHHHHh-----CCCEEEecH
Confidence 6999999999999999999987 666776654
No 71
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]}
Probab=97.37 E-value=5.6e-05 Score=57.45 Aligned_cols=22 Identities=45% Similarity=0.777 Sum_probs=21.1
Q ss_pred EEEeCCCCccHHHHHHHHHHHh
Q 020071 49 LILAGPPGTGKTTSILALAHEL 70 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l 70 (331)
++|+||||+||||+|+.+++.+
T Consensus 5 I~i~G~~GsGKTTva~~L~~~~ 26 (176)
T d2bdta1 5 YIITGPAGVGKSTTCKRLAAQL 26 (176)
T ss_dssp EEEECSTTSSHHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHHHc
Confidence 6999999999999999999987
No 72
>d3ctda1 a.80.1.2 (A:258-420) Uncharacterized protein YrvN {Prochlorococcus marinus [TaxId: 1219]}
Probab=97.36 E-value=0.0016 Score=48.27 Aligned_cols=51 Identities=16% Similarity=0.166 Sum_probs=45.6
Q ss_pred CHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHh-cccC
Q 020071 236 HPLHVKNMVRNVLEGKFDDACSGLKQLYDLGYSPTDIITTLFRIIKN-YEMA 286 (331)
Q Consensus 236 ~~~~i~~l~~~~~~~~~~~~~~~l~~l~~~g~~~~~i~~~l~~~~~~-~~~~ 286 (331)
+++.+..+.+++.+.|.+.|+.|+..|+..|++|..|.+.|.+++.+ +|+.
T Consensus 2 HYd~iSA~~KSiRgSD~dAAly~larml~~Gedp~~i~RRli~~AsEDIGlA 53 (163)
T d3ctda1 2 HFDVISAFIKSIRGSDPDATLYWLANMVEAGEDPNFIFRRLLISACEDIGLA 53 (163)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHTTGGG
T ss_pred hhHHHHHHHHHHhcCCccHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhccc
Confidence 35678899999999999999999999999999999999999988766 6753
No 73
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=97.29 E-value=6.5e-05 Score=57.47 Aligned_cols=25 Identities=28% Similarity=0.280 Sum_probs=22.6
Q ss_pred EEEeCCCCccHHHHHHHHHHHhcCC
Q 020071 49 LILAGPPGTGKTTSILALAHELLGP 73 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l~~~ 73 (331)
++|+|+||+||||+|+.+++.+...
T Consensus 9 I~l~G~~GsGKTTia~~La~~L~~~ 33 (183)
T d1m8pa3 9 IFLTGYMNSGKDAIARALQVTLNQQ 33 (183)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHHhhc
Confidence 6899999999999999999998543
No 74
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Probab=97.29 E-value=0.0011 Score=51.11 Aligned_cols=22 Identities=45% Similarity=0.780 Sum_probs=20.9
Q ss_pred EEEeCCCCccHHHHHHHHHHHh
Q 020071 49 LILAGPPGTGKTTSILALAHEL 70 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l 70 (331)
++|.||||+||||.++.+++.+
T Consensus 6 iil~G~pGSGKsT~a~~La~~~ 27 (190)
T d1ak2a1 6 AVLLGPPGAGKGTQAPKLAKNF 27 (190)
T ss_dssp EEEECCTTSSHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHh
Confidence 7789999999999999999998
No 75
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major [TaxId: 5664]}
Probab=97.28 E-value=7.2e-05 Score=56.98 Aligned_cols=23 Identities=48% Similarity=0.816 Sum_probs=21.8
Q ss_pred eEEEeCCCCccHHHHHHHHHHHh
Q 020071 48 NLILAGPPGTGKTTSILALAHEL 70 (331)
Q Consensus 48 ~~ll~G~~G~GKt~la~~l~~~l 70 (331)
+++|.||||+||||+++.+++.+
T Consensus 7 ~I~i~G~~GsGKTT~~~~La~~l 29 (174)
T d1y63a_ 7 NILITGTPGTGKTSMAEMIAAEL 29 (174)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHS
T ss_pred EEEEEeCCCCCHHHHHHHHHHHh
Confidence 48999999999999999999987
No 76
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein {Escherichia coli [TaxId: 562]}
Probab=97.28 E-value=0.00029 Score=56.71 Aligned_cols=43 Identities=16% Similarity=0.305 Sum_probs=32.6
Q ss_pred CCceEEEEeCCC-CCCHHHHHHHHHHHHHhcCCcEEEEeeCCCC
Q 020071 110 GKHKVVVLDEAD-SMTAGAQQALRRTMEIYSNSTRFALACNVSS 152 (331)
Q Consensus 110 ~~~~vviide~d-~l~~~~~~~Ll~~le~~~~~~~~I~~~~~~~ 152 (331)
.+++++++||+- .+.......+.+.+.+...+..+|++|.+.+
T Consensus 156 ~~p~ililDEpts~LD~~~~~~i~~~l~~l~~~~Tvi~itH~l~ 199 (241)
T d2pmka1 156 NNPKILIFDEATSALDYESEHVIMRNMHKICKGRTVIIIAHRLS 199 (241)
T ss_dssp TCCSEEEECCCCSCCCHHHHHHHHHHHHHHHTTSEEEEECSSGG
T ss_pred cccchhhhhCCccccCHHHHHHHHHHHHHHhCCCEEEEEECCHH
Confidence 467899999974 5677788888888877655666778887654
No 77
>d2eyqa3 c.37.1.19 (A:546-778) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=97.26 E-value=0.0013 Score=52.38 Aligned_cols=51 Identities=14% Similarity=0.039 Sum_probs=41.2
Q ss_pred CCCccccCHHHHHHHHHHHHcCCCCeEEEeCCCCccHHHHHHHHHHHhcCC
Q 020071 23 KVCDIVGNLDAVARLGIIARDGNMPNLILAGPPGTGKTTSILALAHELLGP 73 (331)
Q Consensus 23 ~~~~~ig~~~~~~~l~~~l~~~~~~~~ll~G~~G~GKt~la~~l~~~l~~~ 73 (331)
.|..--.|..++..+...+.++...+.||+|..|+|||.++...+......
T Consensus 53 P~~lt~~Q~~~~~~i~~~~~~~~~~~~LL~GdvGsGKT~V~~~a~~~~~~~ 103 (233)
T d2eyqa3 53 PFETTPDQAQAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMRAAFLAVDN 103 (233)
T ss_dssp CSCCCHHHHHHHHHHHHHHHSSSCCEEEEECCCCTTTHHHHHHHHHHHHTT
T ss_pred ccccchhHHHHHHHHHHHHhccCccCeEEEcCCCCCcHHHHHHHHHHHHHc
Confidence 455556688888899999999887678999999999999888877765443
No 78
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus globisporus [TaxId: 1459]}
Probab=97.24 E-value=0.0015 Score=49.93 Aligned_cols=22 Identities=32% Similarity=0.588 Sum_probs=21.2
Q ss_pred EEEeCCCCccHHHHHHHHHHHh
Q 020071 49 LILAGPPGTGKTTSILALAHEL 70 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l 70 (331)
++|.||||+||||.|+.+++.+
T Consensus 3 I~i~G~pGSGKsT~a~~La~~~ 24 (182)
T d1s3ga1 3 IVLMGLPGAGKGTQADRIVEKY 24 (182)
T ss_dssp EEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHH
Confidence 7899999999999999999998
No 79
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=97.24 E-value=0.00064 Score=52.72 Aligned_cols=23 Identities=26% Similarity=0.523 Sum_probs=21.5
Q ss_pred eEEEeCCCCccHHHHHHHHHHHh
Q 020071 48 NLILAGPPGTGKTTSILALAHEL 70 (331)
Q Consensus 48 ~~ll~G~~G~GKt~la~~l~~~l 70 (331)
-++|.||||+||+|.++.+++.+
T Consensus 10 iI~l~G~pGSGKsT~a~~La~~~ 32 (194)
T d3adka_ 10 IIFVVGGPGSGKGTQCEKIVQKY 32 (194)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHHHh
Confidence 37999999999999999999987
No 80
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea mays) [TaxId: 4577]}
Probab=97.16 E-value=0.00011 Score=56.97 Aligned_cols=24 Identities=21% Similarity=0.457 Sum_probs=22.2
Q ss_pred CeEEEeCCCCccHHHHHHHHHHHh
Q 020071 47 PNLILAGPPGTGKTTSILALAHEL 70 (331)
Q Consensus 47 ~~~ll~G~~G~GKt~la~~l~~~l 70 (331)
..++|.||||+||||+++.+++.+
T Consensus 4 m~I~i~GppGsGKsT~a~~La~~~ 27 (189)
T d1zaka1 4 LKVMISGAPASGKGTQCELIKTKY 27 (189)
T ss_dssp CCEEEEESTTSSHHHHHHHHHHHH
T ss_pred eEEEEECCCCCCHHHHHHHHHHHH
Confidence 348999999999999999999998
No 81
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=97.15 E-value=0.00016 Score=56.34 Aligned_cols=25 Identities=28% Similarity=0.514 Sum_probs=22.4
Q ss_pred CCeEEEeCCCCccHHHHHHHHHHHh
Q 020071 46 MPNLILAGPPGTGKTTSILALAHEL 70 (331)
Q Consensus 46 ~~~~ll~G~~G~GKt~la~~l~~~l 70 (331)
.|-++|.||||+||||.|+.+++.+
T Consensus 8 ~~iI~i~GppGSGKsT~a~~La~~~ 32 (196)
T d1ukza_ 8 VSVIFVLGGPGAGKGTQCEKLVKDY 32 (196)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHHS
T ss_pred CcEEEEECCCCCCHHHHHHHHHHHh
Confidence 3447999999999999999999988
No 82
>d1qdea_ c.37.1.19 (A:) Initiation factor 4a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=97.10 E-value=0.0016 Score=51.26 Aligned_cols=42 Identities=24% Similarity=0.382 Sum_probs=30.5
Q ss_pred CCCceEEEEeCCCCCCHH-HHHHHHHHHHHhcCCcEEEEeeCC
Q 020071 109 PGKHKVVVLDEADSMTAG-AQQALRRTMEIYSNSTRFALACNV 150 (331)
Q Consensus 109 ~~~~~vviide~d~l~~~-~~~~Ll~~le~~~~~~~~I~~~~~ 150 (331)
...-+.+++||+|.+... -.+.+.++++..+.++.+++.+..
T Consensus 149 l~~l~~lVlDEad~lld~~f~~~v~~I~~~~~~~~Q~vl~SAT 191 (212)
T d1qdea_ 149 TDKIKMFILDEADEMLSSGFKEQIYQIFTLLPPTTQVVLLSAT 191 (212)
T ss_dssp CTTCCEEEEETHHHHHHTTCHHHHHHHHHHSCTTCEEEEEESS
T ss_pred cCcceEEeehhhhhhcccchHHHHHHHHHhCCCCCeEEEEEee
Confidence 355789999999988543 356677777777777777776543
No 83
>d3bgea1 a.80.1.2 (A:251-434) Uncharacterized protein NTHI1458 {Haemophilus influenzae [TaxId: 727]}
Probab=97.10 E-value=0.00079 Score=51.01 Aligned_cols=50 Identities=14% Similarity=0.075 Sum_probs=44.9
Q ss_pred CHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHh-ccc
Q 020071 236 HPLHVKNMVRNVLEGKFDDACSGLKQLYDLGYSPTDIITTLFRIIKN-YEM 285 (331)
Q Consensus 236 ~~~~i~~l~~~~~~~~~~~~~~~l~~l~~~g~~~~~i~~~l~~~~~~-~~~ 285 (331)
+++.+..+++++.+.|.+.|+.||..|+..|++|..|.+.|..++.+ +|+
T Consensus 4 hYd~iSA~~KSiRgSD~dAaly~larml~~GeDp~~i~RRl~~~AsEDIGl 54 (184)
T d3bgea1 4 FYDLISALHKSVRGSAPDAALYWYARILTAGGDPLYVARRLLAIASEDVGN 54 (184)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHTTGG
T ss_pred HHHHHHHHHHHHhcCCccHHHHHHHHHHHcCCChHHHHHHHHHHHHhhcCC
Confidence 45678899999999999999999999999999999999999887765 564
No 84
>d2g9na1 c.37.1.19 (A:21-238) Initiation factor 4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.09 E-value=0.0028 Score=50.03 Aligned_cols=43 Identities=26% Similarity=0.331 Sum_probs=31.7
Q ss_pred CCCceEEEEeCCCCCCHH-HHHHHHHHHHHhcCCcEEEEeeCCC
Q 020071 109 PGKHKVVVLDEADSMTAG-AQQALRRTMEIYSNSTRFALACNVS 151 (331)
Q Consensus 109 ~~~~~vviide~d~l~~~-~~~~Ll~~le~~~~~~~~I~~~~~~ 151 (331)
...-+.+|+||+|.+... -.+.+..+++..+.+..+++.+...
T Consensus 153 ~~~l~~lVlDEaD~ll~~~f~~~~~~Il~~~~~~~Q~il~SAT~ 196 (218)
T d2g9na1 153 PKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATM 196 (218)
T ss_dssp STTCCEEEEESHHHHHHTTCHHHHHHHHHHSCTTCEEEEEESCC
T ss_pred cccceEEEeeecchhhcCchHHHHHHHHHhCCCCCeEEEEEecC
Confidence 456789999999998653 3566777777777778887776543
No 85
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=97.08 E-value=0.00021 Score=54.80 Aligned_cols=22 Identities=36% Similarity=0.591 Sum_probs=21.3
Q ss_pred EEEeCCCCccHHHHHHHHHHHh
Q 020071 49 LILAGPPGTGKTTSILALAHEL 70 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l 70 (331)
++|.||||+||||.++.+++.+
T Consensus 3 I~i~G~pGSGKsT~a~~La~~~ 24 (182)
T d1zina1 3 LVLMGLPGAGKGTQAEKIVAAY 24 (182)
T ss_dssp EEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHH
Confidence 7899999999999999999998
No 86
>d1g6oa_ c.37.1.11 (A:) Hexameric traffic ATPase, HP0525 {Helicobacter pylori [TaxId: 210]}
Probab=97.08 E-value=0.0018 Score=54.33 Aligned_cols=94 Identities=18% Similarity=0.155 Sum_probs=58.2
Q ss_pred HHHHHHHHHHHHcCCCCeEEEeCCCCccHHHHHHHHHHHhcCCCC--------------CCceEEeecCCCCChHhHHHH
Q 020071 31 LDAVARLGIIARDGNMPNLILAGPPGTGKTTSILALAHELLGPNY--------------REAVMELNASDDRGIDVVRNK 96 (331)
Q Consensus 31 ~~~~~~l~~~l~~~~~~~~ll~G~~G~GKt~la~~l~~~l~~~~~--------------~~~~~~~~~~~~~~~~~i~~~ 96 (331)
++....|...+..+. +++++|++|+||||+.+++...+..... ...++.+..... -...+.
T Consensus 153 ~~~~~~l~~~v~~~~--nili~G~tgSGKTT~l~al~~~i~~~~rivtiEd~~El~l~~~~~~~~~~~~~~---~~~~~l 227 (323)
T d1g6oa_ 153 EQAISAIKDGIAIGK--NVIVCGGTGSGKTTYIKSIMEFIPKEERIISIEDTEEIVFKHHKNYTQLFFGGN---ITSADC 227 (323)
T ss_dssp HHHHHHHHHHHHHTC--CEEEEESTTSSHHHHHHHHGGGSCTTCCEEEEESSCCCCCSSCSSEEEEECBTT---BCHHHH
T ss_pred HHHHHHHHHHHHhCC--CEEEEeeccccchHHHHHHhhhcccccceeeccchhhhhcccccccceeccccc---hhHHHH
Confidence 566777888888776 6999999999999999999987753210 111222222111 133444
Q ss_pred HHHHHhcccCCCCCCceEEEEeCCCCCCHHHHHHHHHHHHHhc
Q 020071 97 IKMFAQKKVTLPPGKHKVVVLDEADSMTAGAQQALRRTMEIYS 139 (331)
Q Consensus 97 i~~~~~~~~~~~~~~~~vviide~d~l~~~~~~~Ll~~le~~~ 139 (331)
++.+. ..++..+++.|+-. .++.. +++.+....
T Consensus 228 l~~~l-------R~~pd~iivgEiR~--~ea~~-~l~a~~tGh 260 (323)
T d1g6oa_ 228 LKSCL-------RMRPDRIILGELRS--SEAYD-FYNVLCSGH 260 (323)
T ss_dssp HHHHT-------TSCCSEEEESCCCS--THHHH-HHHHHHTTC
T ss_pred HHHHh-------ccCCCcccCCccCc--hhHHH-HHHHHHhcC
Confidence 44433 33467899999863 34444 566666443
No 87
>d2qw6a1 a.80.1.2 (A:241-328) Uncharacterized protein EfaeDRAFT_0938 {Enterococcus faecium [TaxId: 1352]}
Probab=97.08 E-value=0.0071 Score=39.28 Aligned_cols=82 Identities=15% Similarity=0.135 Sum_probs=54.8
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHh-cccChHhHHHHHHHHHHHHHHHhcCCCchHHHHHH
Q 020071 239 HVKNMVRNVLEGKFDDACSGLKQLYDLGYSPTDIITTLFRIIKN-YEMAEHLKLEFMKEAGFAHMRICDGVGSYLQLCGL 317 (331)
Q Consensus 239 ~i~~l~~~~~~~~~~~~~~~l~~l~~~g~~~~~i~~~l~~~~~~-~~~~~~~~~~~~~~l~~~~~~l~~~~~~~l~l~~l 317 (331)
.+..+.+++.+.|.+.++.|+.+|+..| ++..|.+.+...+.+ +|+.+.....+.....++-.++. --..++.|...
T Consensus 3 ~iSA~~KSiRgSD~dAAlywlarml~~G-D~~~i~RRLi~~AsEDIGlAdp~al~~~~~a~~a~~~iG-~PE~~i~La~a 80 (88)
T d2qw6a1 3 VISAFQKSIRGSDVDAALHYLARLVEAG-DLASICRRLMVIGYEDIGLGNPAAAARTVNAVLAAEKLG-LPEARIPLADV 80 (88)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHTC---CHHHHHHHHHHHHHHHHHC-TTTTHHHHHHH
T ss_pred HHHHHHHHHHcCCccHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHhhccChHHHHHHHHHHHHHHHhC-CcHHHHHHHHH
Confidence 4678899999999999999999999999 899999999887765 67644444444444444333333 22445555555
Q ss_pred HHHHH
Q 020071 318 LAKLS 322 (331)
Q Consensus 318 ~~~l~ 322 (331)
+.-++
T Consensus 81 viyLa 85 (88)
T d2qw6a1 81 VVDLC 85 (88)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 54443
No 88
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=97.08 E-value=0.00098 Score=50.93 Aligned_cols=22 Identities=41% Similarity=0.798 Sum_probs=20.9
Q ss_pred EEEeCCCCccHHHHHHHHHHHh
Q 020071 49 LILAGPPGTGKTTSILALAHEL 70 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l 70 (331)
++|.||||+||||.++.+++.+
T Consensus 5 Ivl~G~pGSGKtT~a~~La~~~ 26 (180)
T d1akya1 5 MVLIGPPGAGKGTQAPNLQERF 26 (180)
T ss_dssp EEEECCTTSSHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHh
Confidence 7888999999999999999998
No 89
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=97.07 E-value=0.0002 Score=55.05 Aligned_cols=23 Identities=48% Similarity=0.879 Sum_probs=21.5
Q ss_pred eEEEeCCCCccHHHHHHHHHHHh
Q 020071 48 NLILAGPPGTGKTTSILALAHEL 70 (331)
Q Consensus 48 ~~ll~G~~G~GKt~la~~l~~~l 70 (331)
+++|.||||+||||.++.+++.+
T Consensus 2 ~I~i~G~pGsGKsT~a~~La~~~ 24 (181)
T d2cdna1 2 RVLLLGPPGAGKGTQAVKLAEKL 24 (181)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHH
Confidence 37899999999999999999998
No 90
>d1hv8a1 c.37.1.19 (A:3-210) Putative DEAD box RNA helicase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=97.05 E-value=0.003 Score=49.43 Aligned_cols=41 Identities=24% Similarity=0.351 Sum_probs=29.9
Q ss_pred CCCceEEEEeCCCCC-CHHHHHHHHHHHHHhcCCcEEEEeeC
Q 020071 109 PGKHKVVVLDEADSM-TAGAQQALRRTMEIYSNSTRFALACN 149 (331)
Q Consensus 109 ~~~~~vviide~d~l-~~~~~~~Ll~~le~~~~~~~~I~~~~ 149 (331)
..+-+.+||||+|.+ .....+.+.++++..+.++++++.+.
T Consensus 143 ~~~l~~lViDEad~l~~~~~~~~i~~I~~~~~~~~Q~i~~SA 184 (208)
T d1hv8a1 143 LKNVKYFILDEADEMLNMGFIKDVEKILNACNKDKRILLFSA 184 (208)
T ss_dssp TTSCCEEEEETHHHHHTTTTHHHHHHHHHTSCSSCEEEEECS
T ss_pred cccCcEEEEEChHHhhcCCChHHHHHHHHhCCCCCeEEEEEc
Confidence 455689999999976 33345667788887777788877664
No 91
>d1t6na_ c.37.1.19 (A:) Spliceosome RNA helicase BAT1 (UAP56) {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.04 E-value=0.0078 Score=46.88 Aligned_cols=43 Identities=14% Similarity=0.225 Sum_probs=30.6
Q ss_pred CCCceEEEEeCCCCCCH--HHHHHHHHHHHHhcCCcEEEEeeCCC
Q 020071 109 PGKHKVVVLDEADSMTA--GAQQALRRTMEIYSNSTRFALACNVS 151 (331)
Q Consensus 109 ~~~~~vviide~d~l~~--~~~~~Ll~~le~~~~~~~~I~~~~~~ 151 (331)
..+-+.+++||+|.+-. .-.+.+..+++..+.+..+++.+...
T Consensus 143 l~~l~~lVlDEaD~ll~~~~~~~~i~~I~~~~~~~~Q~il~SAT~ 187 (207)
T d1t6na_ 143 LKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATL 187 (207)
T ss_dssp CTTCCEEEEESHHHHHSSHHHHHHHHHHHHTSCSSSEEEEEESCC
T ss_pred ccccceeehhhhhhhhhcCCcHHHHHHHHHhCCCCCEEEEEeeeC
Confidence 45678999999997743 35566777777777777777765443
No 92
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.02 E-value=0.00025 Score=55.05 Aligned_cols=23 Identities=26% Similarity=0.494 Sum_probs=21.6
Q ss_pred eEEEeCCCCccHHHHHHHHHHHh
Q 020071 48 NLILAGPPGTGKTTSILALAHEL 70 (331)
Q Consensus 48 ~~ll~G~~G~GKt~la~~l~~~l 70 (331)
.++|.||||+||||.|+.+++.+
T Consensus 3 iI~i~GppGSGKsT~a~~La~~~ 25 (194)
T d1teva_ 3 VVFVLGGPGAGKGTQCARIVEKY 25 (194)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHh
Confidence 37999999999999999999988
No 93
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Probab=97.02 E-value=0.00028 Score=54.72 Aligned_cols=25 Identities=24% Similarity=0.476 Sum_probs=22.4
Q ss_pred CCeEEEeCCCCccHHHHHHHHHHHh
Q 020071 46 MPNLILAGPPGTGKTTSILALAHEL 70 (331)
Q Consensus 46 ~~~~ll~G~~G~GKt~la~~l~~~l 70 (331)
.-.++|.||||+||||.++.+++.+
T Consensus 6 ~mrIiliG~PGSGKtT~a~~La~~~ 30 (189)
T d2ak3a1 6 LLRAAIMGAPGSGKGTVSSRITKHF 30 (189)
T ss_dssp CCEEEEECCTTSSHHHHHHHHHHHB
T ss_pred ceeEEEECCCCCCHHHHHHHHHHHH
Confidence 3357889999999999999999988
No 94
>d1veca_ c.37.1.19 (A:) DEAD box RNA helicase rck/p54 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.97 E-value=0.0034 Score=48.98 Aligned_cols=41 Identities=20% Similarity=0.270 Sum_probs=29.1
Q ss_pred CCCceEEEEeCCCCCCH-HHHHHHHHHHHHhcCCcEEEEeeC
Q 020071 109 PGKHKVVVLDEADSMTA-GAQQALRRTMEIYSNSTRFALACN 149 (331)
Q Consensus 109 ~~~~~vviide~d~l~~-~~~~~Ll~~le~~~~~~~~I~~~~ 149 (331)
...-+.+|+||+|.|.. .-.+.+..+++..+.+..+++.+.
T Consensus 144 ~~~l~~lVlDEaD~ll~~~f~~~i~~I~~~~~~~~Q~~l~SA 185 (206)
T d1veca_ 144 VDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSA 185 (206)
T ss_dssp CTTCCEEEEETHHHHTSTTTHHHHHHHHHHSCTTCEEEEEES
T ss_pred ccccceEEEeccccccccchHHHHHHHHHhCCCCCEEEEEEe
Confidence 45678999999997753 335566777777777777776654
No 95
>d1wp9a1 c.37.1.19 (A:1-200) putative ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]}
Probab=96.96 E-value=0.0006 Score=53.04 Aligned_cols=22 Identities=32% Similarity=0.456 Sum_probs=17.7
Q ss_pred eEEEeCCCCccHHHHHHHHHHH
Q 020071 48 NLILAGPPGTGKTTSILALAHE 69 (331)
Q Consensus 48 ~~ll~G~~G~GKt~la~~l~~~ 69 (331)
+.++++|.|+|||.++..++..
T Consensus 25 n~lv~~pTGsGKT~i~~~~~~~ 46 (200)
T d1wp9a1 25 NCLIVLPTGLGKTLIAMMIAEY 46 (200)
T ss_dssp CEEEECCTTSCHHHHHHHHHHH
T ss_pred CeEEEeCCCCcHHHHHHHHHHH
Confidence 4889999999999876666553
No 96
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=96.96 E-value=0.0003 Score=53.89 Aligned_cols=28 Identities=29% Similarity=0.415 Sum_probs=24.3
Q ss_pred EEEeCCCCccHHHHHHHHHHHhcCCCCC
Q 020071 49 LILAGPPGTGKTTSILALAHELLGPNYR 76 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l~~~~~~ 76 (331)
++|.|++|+||||+++.+++.+...+..
T Consensus 4 I~i~G~~GsGKsT~~~~L~~~l~~~~~~ 31 (190)
T d1khta_ 4 VVVTGVPGVGSTTSSQLAMDNLRKEGVN 31 (190)
T ss_dssp EEEECCTTSCHHHHHHHHHHHHHTTTCC
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHcCCC
Confidence 6999999999999999999998655433
No 97
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}
Probab=96.93 E-value=0.00034 Score=55.38 Aligned_cols=24 Identities=42% Similarity=0.692 Sum_probs=22.0
Q ss_pred CeEEEeCCCCccHHHHHHHHHHHh
Q 020071 47 PNLILAGPPGTGKTTSILALAHEL 70 (331)
Q Consensus 47 ~~~ll~G~~G~GKt~la~~l~~~l 70 (331)
|-+.+.||||+||+|.++.+++.+
T Consensus 4 piI~I~GppGSGKgT~ak~La~~~ 27 (225)
T d1ckea_ 4 PVITIDGPSGAGKGTLCKAMAEAL 27 (225)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHh
Confidence 446889999999999999999998
No 98
>d1tf7a2 c.37.1.11 (A:256-497) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=96.93 E-value=0.00016 Score=58.34 Aligned_cols=37 Identities=22% Similarity=0.370 Sum_probs=28.0
Q ss_pred HHHHHHcCCCCe--EEEeCCCCccHHHHHHHHHHHhcCC
Q 020071 37 LGIIARDGNMPN--LILAGPPGTGKTTSILALAHELLGP 73 (331)
Q Consensus 37 l~~~l~~~~~~~--~ll~G~~G~GKt~la~~l~~~l~~~ 73 (331)
|.+.+.+|-.+. ++++||||+|||+++..++......
T Consensus 15 LD~~l~GGi~~gsl~li~G~pGsGKT~l~~qia~~~~~~ 53 (242)
T d1tf7a2 15 LDEMCGGGFFKDSIILATGATGTGKTLLVSRFVENACAN 53 (242)
T ss_dssp HHHHTTSSEESSCEEEEEECTTSSHHHHHHHHHHHHHTT
T ss_pred HHHhhcCCCcCCeEEEEEeCCCCCHHHHHHHHHHHHHHh
Confidence 445555553333 6999999999999999999987544
No 99
>d2p6ra3 c.37.1.19 (A:1-202) Hel308 helicase {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=96.90 E-value=0.00086 Score=52.33 Aligned_cols=40 Identities=15% Similarity=0.136 Sum_probs=27.7
Q ss_pred CCceEEEEeCCCCCCHH----HHHHHHHHHHHhcCCcEEEEeeC
Q 020071 110 GKHKVVVLDEADSMTAG----AQQALRRTMEIYSNSTRFALACN 149 (331)
Q Consensus 110 ~~~~vviide~d~l~~~----~~~~Ll~~le~~~~~~~~I~~~~ 149 (331)
....+||+||+|.+..+ ..+.++..+...++++++|+.|.
T Consensus 137 ~~~~~ii~DE~h~~~~~~r~~~~~~~l~~i~~~~~~~~~l~lSA 180 (202)
T d2p6ra3 137 KAVSCLVVDEIHLLDSEKRGATLEILVTKMRRMNKALRVIGLSA 180 (202)
T ss_dssp GGCCEEEETTGGGGGCTTTHHHHHHHHHHHHHHCTTCEEEEEEC
T ss_pred hhhhhccccHHHHhcccccchHHHHHHHHHHhcCCCCcEEEEcC
Confidence 34679999999987532 34556666776667777776553
No 100
>d2j0sa1 c.37.1.19 (A:22-243) Probable ATP-dependent RNA helicase DDX48 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.82 E-value=0.0044 Score=48.94 Aligned_cols=42 Identities=24% Similarity=0.290 Sum_probs=30.1
Q ss_pred CCCceEEEEeCCCCCCHH-HHHHHHHHHHHhcCCcEEEEeeCC
Q 020071 109 PGKHKVVVLDEADSMTAG-AQQALRRTMEIYSNSTRFALACNV 150 (331)
Q Consensus 109 ~~~~~vviide~d~l~~~-~~~~Ll~~le~~~~~~~~I~~~~~ 150 (331)
...-+.+|+||+|.+-.. -.+.+..+++..+.+..+++.+..
T Consensus 157 ~~~l~~lVlDEaD~ll~~~f~~~i~~I~~~l~~~~Q~ilfSAT 199 (222)
T d2j0sa1 157 TRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISAT 199 (222)
T ss_dssp CTTCCEEEEETHHHHTSTTTHHHHHHHHTTSCTTCEEEEEESC
T ss_pred cccceeeeecchhHhhhcCcHHHHHHHHHhCCCCCEEEEEEEe
Confidence 355789999999987543 456677777777777777776544
No 101
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter MsbA, C-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=96.80 E-value=0.0024 Score=51.58 Aligned_cols=42 Identities=14% Similarity=0.309 Sum_probs=31.3
Q ss_pred CceEEEEeCC-CCCCHHHHHHHHHHHHHhcCCcEEEEeeCCCC
Q 020071 111 KHKVVVLDEA-DSMTAGAQQALRRTMEIYSNSTRFALACNVSS 152 (331)
Q Consensus 111 ~~~vviide~-d~l~~~~~~~Ll~~le~~~~~~~~I~~~~~~~ 152 (331)
++.++++||+ -.+.......+.+.+.+...+..+|++|.+.+
T Consensus 170 ~p~ililDEpts~LD~~~~~~i~~~l~~l~~~~Tvi~itH~l~ 212 (253)
T d3b60a1 170 DSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLS 212 (253)
T ss_dssp CCSEEEEETTTSSCCHHHHHHHHHHHHHHHTTSEEEEECSCGG
T ss_pred CCCEEEeccccccCCHHHHHHHHHHHHHhccCCEEEEEECCHH
Confidence 4789999997 45677777888888876655666777777654
No 102
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia coli [TaxId: 562]}
Probab=96.80 E-value=0.00042 Score=52.98 Aligned_cols=22 Identities=32% Similarity=0.483 Sum_probs=21.0
Q ss_pred EEEeCCCCccHHHHHHHHHHHh
Q 020071 49 LILAGPPGTGKTTSILALAHEL 70 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l 70 (331)
++|.||||+||||.++.+++.+
T Consensus 3 I~i~G~pGSGKsT~~~~La~~~ 24 (179)
T d1e4va1 3 IILLGAPVAGKGTQAQFIMEKY 24 (179)
T ss_dssp EEEEESTTSSHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHh
Confidence 6889999999999999999998
No 103
>d1s2ma1 c.37.1.19 (A:46-251) Putative ATP-dependent RNA helicase DHH1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.77 E-value=0.0052 Score=47.84 Aligned_cols=42 Identities=14% Similarity=0.240 Sum_probs=30.2
Q ss_pred CCCceEEEEeCCCCCCHH-HHHHHHHHHHHhcCCcEEEEeeCC
Q 020071 109 PGKHKVVVLDEADSMTAG-AQQALRRTMEIYSNSTRFALACNV 150 (331)
Q Consensus 109 ~~~~~vviide~d~l~~~-~~~~Ll~~le~~~~~~~~I~~~~~ 150 (331)
..+-+.+|+||+|.+-.. -.+.+..+++..+..+.+|+.+..
T Consensus 141 l~~l~~lV~DEaD~l~~~~f~~~v~~I~~~l~~~~Q~il~SAT 183 (206)
T d1s2ma1 141 LSDCSLFIMDEADKMLSRDFKTIIEQILSFLPPTHQSLLFSAT 183 (206)
T ss_dssp CTTCCEEEEESHHHHSSHHHHHHHHHHHTTSCSSCEEEEEESC
T ss_pred cccceEEEeechhhhhhhhhHHHHHHHHHhCCCCCEEEEEEEe
Confidence 355689999999988643 456677777777777777776543
No 104
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export ATP-binding/permease protein SAV1866 {Staphylococcus aureus [TaxId: 1280]}
Probab=96.74 E-value=0.002 Score=51.98 Aligned_cols=42 Identities=14% Similarity=0.340 Sum_probs=32.1
Q ss_pred CceEEEEeCC-CCCCHHHHHHHHHHHHHhcCCcEEEEeeCCCC
Q 020071 111 KHKVVVLDEA-DSMTAGAQQALRRTMEIYSNSTRFALACNVSS 152 (331)
Q Consensus 111 ~~~vviide~-d~l~~~~~~~Ll~~le~~~~~~~~I~~~~~~~ 152 (331)
+++++++||+ ..+.......+.+.+.....+..+|++|.+.+
T Consensus 172 ~p~ililDEpts~LD~~t~~~i~~~l~~l~~~~TvI~itH~~~ 214 (255)
T d2hyda1 172 NPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLS 214 (255)
T ss_dssp CCSEEEEESTTTTCCHHHHHHHHHHHHHHTTTSEEEEECSSGG
T ss_pred CCCEEEEeCccccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHH
Confidence 5789999997 46677788888888887665566777787654
No 105
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter, ATP-binding protein {Methanosarcina acetivorans [TaxId: 2214]}
Probab=96.74 E-value=0.0026 Score=50.31 Aligned_cols=42 Identities=17% Similarity=0.282 Sum_probs=30.2
Q ss_pred CCceEEEEeCC-CCCCHHHHHHHHHHHHHhc--CCcEEEEeeCCC
Q 020071 110 GKHKVVVLDEA-DSMTAGAQQALRRTMEIYS--NSTRFALACNVS 151 (331)
Q Consensus 110 ~~~~vviide~-d~l~~~~~~~Ll~~le~~~--~~~~~I~~~~~~ 151 (331)
.+++++++||. -.+.+.....+.+.+.+.. .+..+|++|.+.
T Consensus 144 ~~P~iLllDEPts~LD~~~~~~i~~~l~~l~~~~g~tii~vtHd~ 188 (229)
T d3d31a2 144 TNPKILLLDEPLSALDPRTQENAREMLSVLHKKNKLTVLHITHDQ 188 (229)
T ss_dssp SCCSEEEEESSSTTSCHHHHHHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred ccCCceeecCCCcCCCHHHHHHHHHHHHHHHhcCCcEEEEEcCCH
Confidence 56899999996 5667777777777776532 356677777664
No 106
>d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]}
Probab=96.72 E-value=0.0053 Score=53.09 Aligned_cols=93 Identities=14% Similarity=0.237 Sum_probs=60.2
Q ss_pred CCCCCccccCHHHHHHHHHHHHcCCCCeEEEeCCCCccHHHHHHHHHHHhcCCCCCCceEEeecCCC-------------
Q 020071 21 PTKVCDIVGNLDAVARLGIIARDGNMPNLILAGPPGTGKTTSILALAHELLGPNYREAVMELNASDD------------- 87 (331)
Q Consensus 21 p~~~~~~ig~~~~~~~l~~~l~~~~~~~~ll~G~~G~GKt~la~~l~~~l~~~~~~~~~~~~~~~~~------------- 87 (331)
+.+++++--.+.....+++++.... .-++|.||+|+||||+...+.+.+.... .+++.+.-+-.
T Consensus 134 ~~~l~~LG~~~~~~~~l~~l~~~~~-GliLvtGpTGSGKSTTl~~~l~~~~~~~--~~i~tiEdPiE~~~~~~~q~~v~~ 210 (401)
T d1p9ra_ 134 RLDLHSLGMTAHNHDNFRRLIKRPH-GIILVTGPTGSGKSTTLYAGLQELNSSE--RNILTVEDPIEFDIDGIGQTQVNP 210 (401)
T ss_dssp CCCGGGSCCCHHHHHHHHHHHTSSS-EEEEEECSTTSCHHHHHHHHHHHHCCTT--SCEEEEESSCCSCCSSSEEEECBG
T ss_pred chhhhhhcccHHHHHHHHHHHhhhh-ceEEEEcCCCCCccHHHHHHhhhhcCCC--ceEEEeccCcccccCCCCeeeecC
Confidence 3467777667888888888876544 1279999999999999999999986542 23333221110
Q ss_pred CChHhHHHHHHHHHhcccCCCCCCceEEEEeCCCCC
Q 020071 88 RGIDVVRNKIKMFAQKKVTLPPGKHKVVVLDEADSM 123 (331)
Q Consensus 88 ~~~~~i~~~i~~~~~~~~~~~~~~~~vviide~d~l 123 (331)
.....+.+.++.+.. .++.+++|.|+-..
T Consensus 211 ~~~~~~~~~l~~~lR-------~dPDvi~igEiRd~ 239 (401)
T d1p9ra_ 211 RVDMTFARGLRAILR-------QDPDVVMVGEIRDL 239 (401)
T ss_dssp GGTBCHHHHHHHHGG-------GCCSEEEESCCCSH
T ss_pred CcCCCHHHHHHHHHh-------hcCCEEEecCcCCh
Confidence 011234455554443 34779999998653
No 107
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId: 1313]}
Probab=96.72 E-value=0.00056 Score=54.18 Aligned_cols=22 Identities=27% Similarity=0.614 Sum_probs=20.5
Q ss_pred EEEeCCCCccHHHHHHHHHHHh
Q 020071 49 LILAGPPGTGKTTSILALAHEL 70 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l 70 (331)
+.+.||||+||||.|+.+++.+
T Consensus 6 IaIdGp~GsGKgT~ak~La~~l 27 (223)
T d1q3ta_ 6 IAIDGPASSGKSTVAKIIAKDF 27 (223)
T ss_dssp EEEECSSCSSHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHh
Confidence 4677999999999999999999
No 108
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=96.69 E-value=0.00039 Score=54.75 Aligned_cols=34 Identities=26% Similarity=0.373 Sum_probs=25.1
Q ss_pred HHHHHcCCCCeEEEeCCCCccHHHHHHHHHHHhc
Q 020071 38 GIIARDGNMPNLILAGPPGTGKTTSILALAHELL 71 (331)
Q Consensus 38 ~~~l~~~~~~~~ll~G~~G~GKt~la~~l~~~l~ 71 (331)
+....+.+..-++|+|.||+||||+|+.+.+.+.
T Consensus 16 r~~~~~~kg~vIwltGlsGsGKTTia~~L~~~l~ 49 (208)
T d1m7ga_ 16 RTELRNQRGLTIWLTGLSASGKSTLAVELEHQLV 49 (208)
T ss_dssp HHHHHTSSCEEEEEECSTTSSHHHHHHHHHHHHH
T ss_pred HHHHhCCCCeEEEEECCCCCCHHHHHHHHHHHHH
Confidence 3334443322379999999999999999998763
No 109
>d2r9ga1 a.80.1.2 (A:238-423) Uncharacterized protein EfaeDRAFT_0938 {Enterococcus faecium [TaxId: 1352]}
Probab=96.68 E-value=0.016 Score=43.71 Aligned_cols=54 Identities=17% Similarity=0.159 Sum_probs=45.5
Q ss_pred CHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHh-cccChHhH
Q 020071 236 HPLHVKNMVRNVLEGKFDDACSGLKQLYDLGYSPTDIITTLFRIIKN-YEMAEHLK 290 (331)
Q Consensus 236 ~~~~i~~l~~~~~~~~~~~~~~~l~~l~~~g~~~~~i~~~l~~~~~~-~~~~~~~~ 290 (331)
+++.+..+.+++.+.|.+.|+.|+.+|+..| ++..|.+.|..++.+ +|+.+...
T Consensus 3 hyd~iSA~~KSiRgSD~daAly~larml~~G-d~~~i~RRL~~~AsEDIGlAdp~a 57 (186)
T d2r9ga1 3 HYDVISAFQKSIRGSDVDAALHYLARLVEAG-DLASICRRLMVIGYEDIGLGNPAA 57 (186)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHT-CHHHHHHHHHHHHHHTTGGGCHHH
T ss_pred HHHHHHHHHHHHhcCCHhHHHHHHHHHHHcC-CchHHHHHHHHHHHHHhhccChHH
Confidence 4577889999999999999999999999999 899999999887765 66633333
No 110
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Probab=96.66 E-value=0.00057 Score=52.47 Aligned_cols=25 Identities=32% Similarity=0.448 Sum_probs=22.7
Q ss_pred EEEeCCCCccHHHHHHHHHHHhcCC
Q 020071 49 LILAGPPGTGKTTSILALAHELLGP 73 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l~~~ 73 (331)
++|.|++|+||||+++.+++.+...
T Consensus 4 ivi~G~~GsGKTT~~~~La~~L~~~ 28 (194)
T d1nksa_ 4 GIVTGIPGVGKSTVLAKVKEILDNQ 28 (194)
T ss_dssp EEEEECTTSCHHHHHHHHHHHHHTT
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHc
Confidence 5899999999999999999998654
No 111
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.65 E-value=0.0045 Score=49.82 Aligned_cols=42 Identities=21% Similarity=0.230 Sum_probs=30.5
Q ss_pred CCceEEEEeCC-CCCCHHHHHHHHHHHHHhcC--CcEEEEeeCCC
Q 020071 110 GKHKVVVLDEA-DSMTAGAQQALRRTMEIYSN--STRFALACNVS 151 (331)
Q Consensus 110 ~~~~vviide~-d~l~~~~~~~Ll~~le~~~~--~~~~I~~~~~~ 151 (331)
.+++++++||+ ..+.......+.+.+.+... +..+|++|.+.
T Consensus 168 ~~p~ililDEpTs~LD~~~~~~i~~~l~~l~~~~~~Tvi~itH~l 212 (251)
T d1jj7a_ 168 RKPCVLILDDATSALDANSQLQVEQLLYESPERYSRSVLLITQHL 212 (251)
T ss_dssp TCCSEEEEESTTTTCCHHHHHHHHHHHHTCGGGGGCEEEEECSCH
T ss_pred cCCcEEEecCcCcccChhhHHHHHHHHHHHhhhcCCEEEEEeCCH
Confidence 46899999996 56677778888888876433 45567777653
No 112
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}
Probab=96.64 E-value=0.0016 Score=51.96 Aligned_cols=42 Identities=14% Similarity=0.184 Sum_probs=30.2
Q ss_pred CCceEEEEeCC-CCCCHHHHHHHHHHHHHhc--CCcEEEEeeCCC
Q 020071 110 GKHKVVVLDEA-DSMTAGAQQALRRTMEIYS--NSTRFALACNVS 151 (331)
Q Consensus 110 ~~~~vviide~-d~l~~~~~~~Ll~~le~~~--~~~~~I~~~~~~ 151 (331)
.+++++++||. -.+.+.....+++.+.+.. .++.+|++|.+.
T Consensus 153 ~~P~iLllDEPts~LD~~~~~~i~~ll~~l~~~~g~tii~vTHd~ 197 (239)
T d1v43a3 153 VEPDVLLMDEPLSNLDAKLRVAMRAEIKKLQQKLKVTTIYVTHDQ 197 (239)
T ss_dssp TCCSEEEEESTTTTSCHHHHHHHHHHHHHHHHHHTCEEEEEESCH
T ss_pred cCCCceeecCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEeCCH
Confidence 46899999996 5667777777777776542 256677777664
No 113
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE (MnmE), G domain {Escherichia coli [TaxId: 562]}
Probab=96.64 E-value=0.0033 Score=46.61 Aligned_cols=100 Identities=15% Similarity=0.175 Sum_probs=52.7
Q ss_pred EEEeCCCCccHHHHHHHHHHHhcCC-----CCCC------------ceEEeecCCCC-ChHhHHH-HHHHHHhcccCCCC
Q 020071 49 LILAGPPGTGKTTSILALAHELLGP-----NYRE------------AVMELNASDDR-GIDVVRN-KIKMFAQKKVTLPP 109 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l~~~-----~~~~------------~~~~~~~~~~~-~~~~i~~-~i~~~~~~~~~~~~ 109 (331)
++|.|++|+|||++..++...-... +... .+..++..... ....... ........-. .
T Consensus 4 I~lvG~~nvGKSsLin~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~~~~---~ 80 (161)
T d2gj8a1 4 VVIAGRPNAGKSSLLNALAGREAAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLREASDEVERIGIERAWQEIE---Q 80 (161)
T ss_dssp EEEEESTTSSHHHHHHHHHTSCCSCCCSSTTCCCSCEEEEEEETTEEEEEEECCCCSCCSSHHHHHHHHHHHHHHH---T
T ss_pred EEEECCCCCCHHHHHHHHhCCCceEeecccccccceEeeeeeccCceeeeccccccccccccchhHHHHHHHHHHH---h
Confidence 7999999999999999997542110 0000 11111111111 1111111 1111111110 3
Q ss_pred CCceEEEEeCCCCCCHHHHHHHHHHHHHhcCCcEEEEeeCCC
Q 020071 110 GKHKVVVLDEADSMTAGAQQALRRTMEIYSNSTRFALACNVS 151 (331)
Q Consensus 110 ~~~~vviide~d~l~~~~~~~Ll~~le~~~~~~~~I~~~~~~ 151 (331)
...-++++|.-+.........+...+........+|++.|..
T Consensus 81 ~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~iilv~NK~ 122 (161)
T d2gj8a1 81 ADRVLFMVDGTTTDAVDPAEIWPEFIARLPAKLPITVVRNKA 122 (161)
T ss_dssp CSEEEEEEETTTCCCCSHHHHCHHHHHHSCTTCCEEEEEECH
T ss_pred ccccceeeccccccchhhhhhhhhhhhhcccccceeeccchh
Confidence 345677777766665555666667777766677788887763
No 114
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=96.62 E-value=0.0013 Score=50.72 Aligned_cols=25 Identities=32% Similarity=0.307 Sum_probs=21.9
Q ss_pred EEEeCCCCccHHHHHHHHHHHhcCC
Q 020071 49 LILAGPPGTGKTTSILALAHELLGP 73 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l~~~ 73 (331)
+-+.|++|+||||+|+.+++.+...
T Consensus 25 IgI~G~~GSGKSTla~~L~~~l~~~ 49 (198)
T d1rz3a_ 25 LGIDGLSRSGKTTLANQLSQTLREQ 49 (198)
T ss_dssp EEEEECTTSSHHHHHHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHHHHhccc
Confidence 4699999999999999999987543
No 115
>d1pzna2 c.37.1.11 (A:96-349) DNA repair protein Rad51, catalytic domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=96.62 E-value=0.0018 Score=51.98 Aligned_cols=35 Identities=26% Similarity=0.210 Sum_probs=26.3
Q ss_pred HHHHHHcCCCCe--EEEeCCCCccHHHHHHHHHHHhc
Q 020071 37 LGIIARDGNMPN--LILAGPPGTGKTTSILALAHELL 71 (331)
Q Consensus 37 l~~~l~~~~~~~--~ll~G~~G~GKt~la~~l~~~l~ 71 (331)
|..++..|-++. ++++||||+|||+++..++....
T Consensus 25 LD~ll~GGlp~G~~~li~G~pGsGKT~~~lq~~~~~~ 61 (254)
T d1pzna2 25 LDKLLGGGIETQAITEVFGEFGSGKTQLAHTLAVMVQ 61 (254)
T ss_dssp HHHHHTSSEESSEEEEEEESTTSSHHHHHHHHHHHTT
T ss_pred HHHhhcCCccCCEEEEEEcCCCCCHHHHHHHHHHHhh
Confidence 444455543333 69999999999999999988764
No 116
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA, C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Probab=96.59 E-value=0.0016 Score=52.24 Aligned_cols=23 Identities=35% Similarity=0.512 Sum_probs=20.9
Q ss_pred EEEeCCCCccHHHHHHHHHHHhc
Q 020071 49 LILAGPPGTGKTTSILALAHELL 71 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l~ 71 (331)
+.+.||+|+||||+++.+...+.
T Consensus 31 vaivG~sGsGKSTLl~ll~gl~~ 53 (242)
T d1mv5a_ 31 IAFAGPSGGGKSTIFSLLERFYQ 53 (242)
T ss_dssp EEEECCTTSSHHHHHHHHTTSSC
T ss_pred EEEECCCCCCHHHHHHHHHHhhC
Confidence 79999999999999999988664
No 117
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=96.58 E-value=0.0018 Score=48.53 Aligned_cols=21 Identities=19% Similarity=0.412 Sum_probs=19.2
Q ss_pred EEEeCCCCccHHHHHHHHHHH
Q 020071 49 LILAGPPGTGKTTSILALAHE 69 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~ 69 (331)
+++.|++|+|||+++..+...
T Consensus 5 v~liG~~~vGKSsLi~rl~~~ 25 (164)
T d1z2aa1 5 MVVVGNGAVGKSSMIQRYCKG 25 (164)
T ss_dssp EEEECSTTSSHHHHHHHHHHC
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 799999999999999988864
No 118
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF1 [TaxId: 9606]}
Probab=96.56 E-value=0.024 Score=41.30 Aligned_cols=22 Identities=27% Similarity=0.406 Sum_probs=19.9
Q ss_pred EEEeCCCCccHHHHHHHHHHHh
Q 020071 49 LILAGPPGTGKTTSILALAHEL 70 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l 70 (331)
+++.|++|+|||+++..+...-
T Consensus 3 ivlvG~~~vGKSsLi~~l~~~~ 24 (160)
T d1r8sa_ 3 ILMVGLDAAGKTTILYKLKLGE 24 (160)
T ss_dssp EEEECSTTSSHHHHHHHHHHHC
T ss_pred EEEECCCCCCHHHHHHHHhcCC
Confidence 7899999999999999997654
No 119
>d1u94a1 c.37.1.11 (A:6-268) RecA protein, ATPase-domain {Escherichia coli [TaxId: 562]}
Probab=96.55 E-value=0.0055 Score=49.64 Aligned_cols=47 Identities=26% Similarity=0.387 Sum_probs=31.0
Q ss_pred HHHHHHHcCCCC--e-EEEeCCCCccHHHHHHHHHHHhcCCCCCCceEEeec
Q 020071 36 RLGIIARDGNMP--N-LILAGPPGTGKTTSILALAHELLGPNYREAVMELNA 84 (331)
Q Consensus 36 ~l~~~l~~~~~~--~-~ll~G~~G~GKt~la~~l~~~l~~~~~~~~~~~~~~ 84 (331)
.|..++..|.+| + ..|+||+|+|||+++..++.....++ ..++.++.
T Consensus 41 ~lD~~Lg~GGi~~g~itei~G~~gsGKTtl~l~~~~~~q~~g--~~~vyidt 90 (263)
T d1u94a1 41 SLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQVIAAAQREG--KTCAFIDA 90 (263)
T ss_dssp HHHHHTSSSSEETTSEEEEECSTTSSHHHHHHHHHHHHHHTT--CCEEEEES
T ss_pred HHHHHhcCCCccCceEEEEecCCCcHHHHHHHHHHHHHHcCC--CEEEEEcc
Confidence 344445435444 2 59999999999999999988775442 33444443
No 120
>d1q0ua_ c.37.1.19 (A:) Probable DEAD box RNA helicase YqfR {Bacillus stearothermophilus [TaxId: 1422]}
Probab=96.47 E-value=0.0061 Score=47.48 Aligned_cols=41 Identities=15% Similarity=0.165 Sum_probs=29.6
Q ss_pred CCceEEEEeCCCCCCHHH-HHHHHHHHHHhcCCcEEEEeeCC
Q 020071 110 GKHKVVVLDEADSMTAGA-QQALRRTMEIYSNSTRFALACNV 150 (331)
Q Consensus 110 ~~~~vviide~d~l~~~~-~~~Ll~~le~~~~~~~~I~~~~~ 150 (331)
.+-+.++|||+|.+.... .+.+..++...+.+..+++.+..
T Consensus 146 ~~l~~lViDEad~ll~~~f~~~v~~I~~~~~~~~Q~il~SAT 187 (209)
T d1q0ua_ 146 HTAHILVVDEADLMLDMGFITDVDQIAARMPKDLQMLVFSAT 187 (209)
T ss_dssp GGCCEEEECSHHHHHHTTCHHHHHHHHHTSCTTCEEEEEESC
T ss_pred ccceEEEEeecccccccccHHHHHHHHHHCCCCCEEEEEEcc
Confidence 456899999999886542 45566777776777888776643
No 121
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.39 E-value=0.0046 Score=46.40 Aligned_cols=23 Identities=26% Similarity=0.528 Sum_probs=20.3
Q ss_pred EEEeCCCCccHHHHHHHHHHHhc
Q 020071 49 LILAGPPGTGKTTSILALAHELL 71 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l~ 71 (331)
+++.|.+|+|||+++..+...-.
T Consensus 9 i~vvG~~~vGKTsLi~~l~~~~f 31 (170)
T d1r2qa_ 9 LVLLGESAVGKSSLVLRFVKGQF 31 (170)
T ss_dssp EEEECSTTSSHHHHHHHHHHSCC
T ss_pred EEEECCCCcCHHHHHHHHHhCCC
Confidence 79999999999999999987543
No 122
>d1szpa2 c.37.1.11 (A:145-395) DNA repair protein Rad51, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.36 E-value=0.005 Score=48.93 Aligned_cols=51 Identities=20% Similarity=0.141 Sum_probs=31.8
Q ss_pred HHHHHHcCCCCe--EEEeCCCCccHHHHHHHHHHHhcCC----CCCCceEEeecCCC
Q 020071 37 LGIIARDGNMPN--LILAGPPGTGKTTSILALAHELLGP----NYREAVMELNASDD 87 (331)
Q Consensus 37 l~~~l~~~~~~~--~ll~G~~G~GKt~la~~l~~~l~~~----~~~~~~~~~~~~~~ 87 (331)
|...+.+|-.+. ++|+||||+|||+++..++...... ..+..++.++....
T Consensus 23 LD~ll~GGi~~G~~~li~G~pGsGKT~l~lq~~~~~~~~~~~~~~~~~~~~i~~~~~ 79 (251)
T d1szpa2 23 LDTLLGGGVETGSITELFGEFRTGKSQLCHTLAVTCQIPLDIGGGEGKCLYIDTEGT 79 (251)
T ss_dssp HHHHHTSSEESSSEEEEEESTTSSHHHHHHHHTTTTTSCTTTTCCSCEEEEEESSSC
T ss_pred HHhhhCCCCcCCeEEEEEcCCCCCHHHHHHHHHHHhhhhhhhccCCceEEEEeecch
Confidence 444454443333 6999999999999999987653211 12344555555444
No 123
>d1gm5a3 c.37.1.19 (A:286-549) RecG helicase domain {Thermotoga maritima [TaxId: 2336]}
Probab=96.35 E-value=0.0043 Score=50.22 Aligned_cols=44 Identities=18% Similarity=0.070 Sum_probs=36.0
Q ss_pred ccCHHHHHHHHHHHHcCCCCeEEEeCCCCccHHHHHHHHHHHhc
Q 020071 28 VGNLDAVARLGIIARDGNMPNLILAGPPGTGKTTSILALAHELL 71 (331)
Q Consensus 28 ig~~~~~~~l~~~l~~~~~~~~ll~G~~G~GKt~la~~l~~~l~ 71 (331)
-.|..++..+.+.+.++..-+-||+|..|+|||-++...+....
T Consensus 86 ~~Q~~ai~ei~~d~~~~~~m~rLL~GdvGSGKT~Va~~a~~~~~ 129 (264)
T d1gm5a3 86 NAQKRAHQEIRNDMISEKPMNRLLQGDVGSGKTVVAQLAILDNY 129 (264)
T ss_dssp HHHHHHHHHHHHHHHSSSCCCCEEECCSSSSHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHhhccCcceeeeeccccccccHHHHHHHHHHH
Confidence 45788888888888888766679999999999998887776554
No 124
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=96.34 E-value=0.003 Score=50.08 Aligned_cols=42 Identities=14% Similarity=0.203 Sum_probs=28.4
Q ss_pred CCceEEEEeCC-CCCCHHHHHHHHHHHHHh--cCCcEEEEeeCCC
Q 020071 110 GKHKVVVLDEA-DSMTAGAQQALRRTMEIY--SNSTRFALACNVS 151 (331)
Q Consensus 110 ~~~~vviide~-d~l~~~~~~~Ll~~le~~--~~~~~~I~~~~~~ 151 (331)
.++.++++||. -.+.+.....+++.+.+. ..+..+|++|.+.
T Consensus 147 ~~P~illlDEPts~LD~~~~~~i~~~l~~l~~~~g~tii~vTHd~ 191 (232)
T d2awna2 147 AEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQ 191 (232)
T ss_dssp TCCSEEEEESTTTTSCHHHHHHHHHHHHHHHHHSCCEEEEEESCH
T ss_pred cCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCH
Confidence 36899999996 466777777676666543 2356677777654
No 125
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=96.34 E-value=0.018 Score=43.29 Aligned_cols=101 Identities=16% Similarity=0.189 Sum_probs=52.7
Q ss_pred EEEeCCCCccHHHHHHHHHHHhcCC---CC--------------CCceEEeecCCCC-ChHhHHHHHHHHHhcccCCCCC
Q 020071 49 LILAGPPGTGKTTSILALAHELLGP---NY--------------REAVMELNASDDR-GIDVVRNKIKMFAQKKVTLPPG 110 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l~~~---~~--------------~~~~~~~~~~~~~-~~~~i~~~i~~~~~~~~~~~~~ 110 (331)
+.|.|.+|+|||++++.+...-... .. +..+..++.+... ......+.......... ...
T Consensus 8 I~lvG~~~~GKSSLin~l~~~~~~~~~~~~~tt~~~~~~~~~~~~~~~~~~DtpG~~~~~~~~~~~~~~~~~~~~--~~a 85 (178)
T d1wf3a1 8 VAIVGKPNVGKSTLLNNLLGVKVAPISPRPQTTRKRLRGILTEGRRQIVFVDTPGLHKPMDALGEFMDQEVYEAL--ADV 85 (178)
T ss_dssp EEEECSTTSSHHHHHHHHHTSCCSCCCSSSCCCCSCEEEEEEETTEEEEEEECCCCCCCCSHHHHHHHHHHHHHT--SSC
T ss_pred EEEECCCCCCHHHHHHHHhCCCceeecccCCcccccccceeeeeeeeeeecccccccccccccchhccccccccc--ccc
Confidence 8999999999999999998642110 00 0112222222211 11122222222111111 134
Q ss_pred CceEEEEeCCCCCCHHHHHHHHHHHHHhcCCcEEEEeeCCCC
Q 020071 111 KHKVVVLDEADSMTAGAQQALRRTMEIYSNSTRFALACNVSS 152 (331)
Q Consensus 111 ~~~vviide~d~l~~~~~~~Ll~~le~~~~~~~~I~~~~~~~ 152 (331)
+--++++|--+..... ...+.+.+.....+..+|++.|...
T Consensus 86 d~il~v~D~~~~~~~~-~~~i~~~l~~~~~~~piilv~NK~D 126 (178)
T d1wf3a1 86 NAVVWVVDLRHPPTPE-DELVARALKPLVGKVPILLVGNKLD 126 (178)
T ss_dssp SEEEEEEETTSCCCHH-HHHHHHHHGGGTTTSCEEEEEECGG
T ss_pred cceeeeechhhhhccc-ccchhhheeccccchhhhhhhcccc
Confidence 4556777765555543 4566677776666677777777543
No 126
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]}
Probab=96.31 E-value=0.0013 Score=49.47 Aligned_cols=33 Identities=18% Similarity=0.230 Sum_probs=26.4
Q ss_pred EEEeCCCCccHHHHHHHHHHHhcCCCCCCceEE
Q 020071 49 LILAGPPGTGKTTSILALAHELLGPNYREAVME 81 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l~~~~~~~~~~~ 81 (331)
+-+.|++|+||||++..++..+...+....++.
T Consensus 4 i~I~G~~gSGKTTli~~l~~~L~~~g~~v~vik 36 (165)
T d1xjca_ 4 WQVVGYKHSGKTTLMEKWVAAAVREGWRVGTVK 36 (165)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHhCCCeEEEEE
Confidence 469999999999999999999876654444443
No 127
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK {Escherichia coli [TaxId: 562]}
Probab=96.30 E-value=0.0029 Score=53.13 Aligned_cols=44 Identities=32% Similarity=0.486 Sum_probs=33.4
Q ss_pred CCCCeEEEeCCCCccHHHHHHHHHHHhcCCCCCCceEEeecCCC
Q 020071 44 GNMPNLILAGPPGTGKTTSILALAHELLGPNYREAVMELNASDD 87 (331)
Q Consensus 44 ~~~~~~ll~G~~G~GKt~la~~l~~~l~~~~~~~~~~~~~~~~~ 87 (331)
++...+-++||||+||||++..+++.+...+....++.++++..
T Consensus 52 ~~~~~IgitG~pGaGKSTLi~~l~~~~~~~g~~vavlavDpss~ 95 (327)
T d2p67a1 52 GNTLRLGVTGTPGAGKSTFLEAFGMLLIREGLKVAVIAVDPSSP 95 (327)
T ss_dssp SCSEEEEEEECTTSCHHHHHHHHHHHHHHTTCCEEEEEECCC--
T ss_pred CCceEEEeeCCCCCCHHHHHHHHHHHHHhcCCceeeecCCCcee
Confidence 33333799999999999999999999877666666777776554
No 128
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=96.28 E-value=0.0015 Score=52.08 Aligned_cols=42 Identities=10% Similarity=0.146 Sum_probs=29.3
Q ss_pred CCceEEEEeCC-CCCCHHHHHHHHHHHHHhcC--CcEEEEeeCCC
Q 020071 110 GKHKVVVLDEA-DSMTAGAQQALRRTMEIYSN--STRFALACNVS 151 (331)
Q Consensus 110 ~~~~vviide~-d~l~~~~~~~Ll~~le~~~~--~~~~I~~~~~~ 151 (331)
.++.++++||. -.+.+.....+.+.+.+... ++.+|++|.+.
T Consensus 143 ~~P~illlDEPts~LD~~~~~~i~~~i~~l~~~~g~tvi~vtHd~ 187 (240)
T d2onka1 143 IQPRLLLLDEPLSAVDLKTKGVLMEELRFVQREFDVPILHVTHDL 187 (240)
T ss_dssp TCCSSBEEESTTSSCCHHHHHHHHHHHHHHHHHHTCCEEEEESCH
T ss_pred ccCCceEecCccccCCHHHHHHHHHHHHHHHHhcCCeEEEEeCCH
Confidence 46899999996 46677777777777765422 45566777653
No 129
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=96.27 E-value=0.01 Score=46.88 Aligned_cols=42 Identities=2% Similarity=0.181 Sum_probs=31.4
Q ss_pred CCceEEEEeCC-CCCCHHHHHHHHHHHHHhc--CCcEEEEeeCCC
Q 020071 110 GKHKVVVLDEA-DSMTAGAQQALRRTMEIYS--NSTRFALACNVS 151 (331)
Q Consensus 110 ~~~~vviide~-d~l~~~~~~~Ll~~le~~~--~~~~~I~~~~~~ 151 (331)
.+++++++||. -.|.+.....+++++.+.. .++.+|++|.+.
T Consensus 162 ~~P~lLllDEPTs~LD~~~~~~i~~~l~~l~~~~g~tii~vTHd~ 206 (230)
T d1l2ta_ 162 NNPPIILADQPTGALDSKTGEKIMQLLKKLNEEDGKTVVVVTHDI 206 (230)
T ss_dssp TCCSEEEEESTTTTSCHHHHHHHHHHHHHHHHTTCCEEEEECSCH
T ss_pred cCCCEEEecCCccccCHHHHHHHHHHHHHHHHhhCCEEEEECCCH
Confidence 46899999996 4667778888888887653 356778888754
No 130
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.25 E-value=0.0012 Score=50.77 Aligned_cols=23 Identities=39% Similarity=0.691 Sum_probs=21.5
Q ss_pred EEEeCCCCccHHHHHHHHHHHhc
Q 020071 49 LILAGPPGTGKTTSILALAHELL 71 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l~ 71 (331)
++|+||+|+|||++++.+++...
T Consensus 4 Ivl~GpsG~GK~tl~~~L~~~~~ 26 (186)
T d1gkya_ 4 IVISGPSGTGKSTLLKKLFAEYP 26 (186)
T ss_dssp EEEECCTTSSHHHHHHHHHHHCT
T ss_pred EEEECCCCCCHHHHHHHHHHhCC
Confidence 89999999999999999999874
No 131
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.25 E-value=0.01 Score=44.03 Aligned_cols=22 Identities=27% Similarity=0.421 Sum_probs=19.6
Q ss_pred EEEeCCCCccHHHHHHHHHHHh
Q 020071 49 LILAGPPGTGKTTSILALAHEL 70 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l 70 (331)
+++.|.+|+|||++++.+...-
T Consensus 3 v~vvG~~~vGKTsLi~r~~~~~ 24 (164)
T d1yzqa1 3 LVFLGEQSVGKTSLITRFMYDS 24 (164)
T ss_dssp EEEEESTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCcCHHHHHHHHHhCC
Confidence 7899999999999999998643
No 132
>d1v5wa_ c.37.1.11 (A:) Meiotic recombination protein DMC1/LIM15 homolog {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.24 E-value=0.006 Score=48.78 Aligned_cols=36 Identities=19% Similarity=-0.004 Sum_probs=26.7
Q ss_pred HHHHHHcCCCCe--EEEeCCCCccHHHHHHHHHHHhcC
Q 020071 37 LGIIARDGNMPN--LILAGPPGTGKTTSILALAHELLG 72 (331)
Q Consensus 37 l~~~l~~~~~~~--~ll~G~~G~GKt~la~~l~~~l~~ 72 (331)
|..++..|-++. ++|+||||+|||+++..++....+
T Consensus 26 LD~~lgGGip~G~~~~i~G~~GsGKT~lalq~~~~~~~ 63 (258)
T d1v5wa_ 26 FDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVTAQL 63 (258)
T ss_dssp HHHHTTSSBCSSEEEEEECCTTCTHHHHHHHHHHHTTS
T ss_pred HHHhhcCCCcCCEEEEEECCCCCCHHHHHHHHHHHHHh
Confidence 344444554444 699999999999999999986543
No 133
>d1n0wa_ c.37.1.11 (A:) DNA repair protein Rad51, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.22 E-value=0.0013 Score=51.55 Aligned_cols=37 Identities=27% Similarity=0.185 Sum_probs=27.2
Q ss_pred HHHHHHcCCCCe--EEEeCCCCccHHHHHHHHHHHhcCC
Q 020071 37 LGIIARDGNMPN--LILAGPPGTGKTTSILALAHELLGP 73 (331)
Q Consensus 37 l~~~l~~~~~~~--~ll~G~~G~GKt~la~~l~~~l~~~ 73 (331)
|...+.+|-.+. ++|+||||+|||+++..++......
T Consensus 12 LD~ll~GGi~~G~v~~i~G~~GsGKT~l~l~la~~~~~~ 50 (242)
T d1n0wa_ 12 LDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLP 50 (242)
T ss_dssp HHHHTTTSEETTSEEEEECCTTSSHHHHHHHHHHHTTSC
T ss_pred HHHhhcCCCcCCEEEEEEeCCCCCHHHHHHHHHHHHHHh
Confidence 444554443333 6999999999999999999876543
No 134
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.22 E-value=0.0046 Score=46.46 Aligned_cols=22 Identities=32% Similarity=0.587 Sum_probs=19.9
Q ss_pred EEEeCCCCccHHHHHHHHHHHh
Q 020071 49 LILAGPPGTGKTTSILALAHEL 70 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l 70 (331)
+++.|++|+|||++++.+...-
T Consensus 8 i~lvG~~~vGKTsLi~~l~~~~ 29 (171)
T d2ew1a1 8 IVLIGNAGVGKTCLVRRFTQGL 29 (171)
T ss_dssp EEEEESTTSSHHHHHHHHHHSS
T ss_pred EEEECCCCcCHHHHHHHHHhCC
Confidence 7999999999999999998754
No 135
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.21 E-value=0.023 Score=42.19 Aligned_cols=22 Identities=18% Similarity=0.425 Sum_probs=20.0
Q ss_pred EEEeCCCCccHHHHHHHHHHHh
Q 020071 49 LILAGPPGTGKTTSILALAHEL 70 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l 70 (331)
+++.|++|+|||+++..+...-
T Consensus 6 i~lvG~~~vGKTsLi~r~~~~~ 27 (167)
T d1kaoa_ 6 VVVLGSGGVGKSALTVQFVTGT 27 (167)
T ss_dssp EEEECCTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCcCHHHHHHHHHhCC
Confidence 7999999999999999998754
No 136
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]}
Probab=96.18 E-value=0.018 Score=45.73 Aligned_cols=42 Identities=14% Similarity=0.194 Sum_probs=30.2
Q ss_pred CCceEEEEeCC-CCCCHHHHHHHHHHHHHhc--CCcEEEEeeCCC
Q 020071 110 GKHKVVVLDEA-DSMTAGAQQALRRTMEIYS--NSTRFALACNVS 151 (331)
Q Consensus 110 ~~~~vviide~-d~l~~~~~~~Ll~~le~~~--~~~~~I~~~~~~ 151 (331)
.+++++++||. -.+.+.....+++.+.+.. .++.+|++|.+.
T Consensus 156 ~~P~iLllDEPt~~LD~~~~~~i~~~l~~l~~~~g~tvi~vTHd~ 200 (240)
T d1g2912 156 RKPQVFLMDEPLSNLDAKLRVRMRAELKKLQRQLGVTTIYVTHDQ 200 (240)
T ss_dssp TCCSEEEEECTTTTSCHHHHHHHHHHHHHHHHHHTCEEEEEESCH
T ss_pred cCCCEEEecCCCcccCHHHHHHHHHHHHHHHhccCCEEEEEcCCH
Confidence 46899999996 4667777777777776542 256677887764
No 137
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo sapiens), ARL5A [TaxId: 9606]}
Probab=96.18 E-value=0.026 Score=42.06 Aligned_cols=33 Identities=21% Similarity=0.338 Sum_probs=24.3
Q ss_pred HHHHHHHcCCCCeEEEeCCCCccHHHHHHHHHHH
Q 020071 36 RLGIIARDGNMPNLILAGPPGTGKTTSILALAHE 69 (331)
Q Consensus 36 ~l~~~l~~~~~~~~ll~G~~G~GKt~la~~l~~~ 69 (331)
.+-+.+.+... .++|.|.+|+|||+++..+...
T Consensus 6 ~~~~~~~~k~~-kI~vvG~~~~GKSsLi~rl~~~ 38 (177)
T d1zj6a1 6 RIWRLFNHQEH-KVIIVGLDNAGKTTILYQFSMN 38 (177)
T ss_dssp HHHHHHTTSCE-EEEEEESTTSSHHHHHHHHHTT
T ss_pred HHHHHhCCCeE-EEEEECCCCCCHHHHHHHHhcC
Confidence 34444444442 3899999999999999988753
No 138
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=96.17 E-value=0.0015 Score=50.36 Aligned_cols=22 Identities=41% Similarity=0.733 Sum_probs=21.0
Q ss_pred EEEeCCCCccHHHHHHHHHHHh
Q 020071 49 LILAGPPGTGKTTSILALAHEL 70 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l 70 (331)
++|.||+|+|||++++.+++..
T Consensus 3 Ivl~GPsGsGK~tl~~~L~~~~ 24 (190)
T d1lvga_ 3 VVLSGPSGAGKSTLLKKLFQEH 24 (190)
T ss_dssp EEEECCTTSSHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHhC
Confidence 7899999999999999999987
No 139
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.14 E-value=0.011 Score=44.03 Aligned_cols=22 Identities=27% Similarity=0.548 Sum_probs=19.8
Q ss_pred EEEeCCCCccHHHHHHHHHHHh
Q 020071 49 LILAGPPGTGKTTSILALAHEL 70 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l 70 (331)
+++.|++|+|||+++..+...-
T Consensus 6 i~viG~~~vGKTsli~~l~~~~ 27 (166)
T d1ctqa_ 6 LVVVGAGGVGKSALTIQLIQNH 27 (166)
T ss_dssp EEEEESTTSSHHHHHHHHHHCC
T ss_pred EEEECCCCCCHHHHHHHHHhCC
Confidence 7999999999999999988753
No 140
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.08 E-value=0.0024 Score=48.46 Aligned_cols=24 Identities=21% Similarity=0.416 Sum_probs=20.6
Q ss_pred EEEeCCCCccHHHHHHHHHHHhcC
Q 020071 49 LILAGPPGTGKTTSILALAHELLG 72 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l~~ 72 (331)
+++.|++|+|||+++..+...-..
T Consensus 5 ivvvG~~~vGKTsLi~~~~~~~f~ 28 (177)
T d1kmqa_ 5 LVIVGDGACGKTCLLIVNSKDQFP 28 (177)
T ss_dssp EEEEESTTSSHHHHHHHHHHSCCC
T ss_pred EEEECCCCcCHHHHHHHHHhCCCC
Confidence 789999999999999998876433
No 141
>d1mo6a1 c.37.1.11 (A:1-269) RecA protein, ATPase-domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=96.07 E-value=0.015 Score=47.10 Aligned_cols=50 Identities=22% Similarity=0.325 Sum_probs=32.3
Q ss_pred HHHHHHHcCCCCe---EEEeCCCCccHHHHHHHHHHHhcCCCCCCceEEeecCCC
Q 020071 36 RLGIIARDGNMPN---LILAGPPGTGKTTSILALAHELLGPNYREAVMELNASDD 87 (331)
Q Consensus 36 ~l~~~l~~~~~~~---~ll~G~~G~GKt~la~~l~~~l~~~~~~~~~~~~~~~~~ 87 (331)
.|...+..|.+|. ..|+||+|+|||+++..++...... +..++.++....
T Consensus 47 ~lD~~lg~gG~~~g~i~e~~G~~~~GKT~l~l~~~~~~q~~--g~~~vyIDtE~~ 99 (269)
T d1mo6a1 47 ALDVALGIGGLPRGRVIEIYGPESSGKTTVALHAVANAQAA--GGVAAFIDAEHA 99 (269)
T ss_dssp HHHHHTSSSSBCSSSEEEEECSSSSSHHHHHHHHHHHHHHT--TCEEEEEESSCC
T ss_pred HHHHhhccCCcccceeEEEecCCCcHHHHHHHHHHHHHhcC--CCEEEEEECCcc
Confidence 3444454344443 5999999999999998887765433 334566665543
No 142
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo sapiens), ARL8A [TaxId: 9606]}
Probab=96.05 E-value=0.013 Score=43.40 Aligned_cols=23 Identities=35% Similarity=0.377 Sum_probs=20.1
Q ss_pred EEEeCCCCccHHHHHHHHHHHhc
Q 020071 49 LILAGPPGTGKTTSILALAHELL 71 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l~ 71 (331)
++|.|++|+|||++...+...-.
T Consensus 5 i~i~G~~~~GKTsLl~~l~~~~~ 27 (164)
T d1zd9a1 5 LTLVGLQYSGKTTFVNVIASGQF 27 (164)
T ss_dssp EEEECSTTSSHHHHHHHHHHSCC
T ss_pred EEEECCCCCCHHHHHHHHHcCCC
Confidence 78999999999999999977543
No 143
>d1htwa_ c.37.1.18 (A:) Hypothetical protein HI0065 {Haemophilus influenzae [TaxId: 727]}
Probab=96.04 E-value=0.0043 Score=45.90 Aligned_cols=48 Identities=19% Similarity=0.194 Sum_probs=32.4
Q ss_pred CccccCHHHHHHHHHHHHc-----CCCCe--EEEeCCCCccHHHHHHHHHHHhcC
Q 020071 25 CDIVGNLDAVARLGIIARD-----GNMPN--LILAGPPGTGKTTSILALAHELLG 72 (331)
Q Consensus 25 ~~~ig~~~~~~~l~~~l~~-----~~~~~--~ll~G~~G~GKt~la~~l~~~l~~ 72 (331)
...+..+.....+-+.+.+ ...|. ++|.|+=|+|||++++.+++.+..
T Consensus 5 ~~~l~~e~~t~~lg~~la~~l~~~~~~~g~ii~L~G~LGaGKTtfvr~~~~~lg~ 59 (158)
T d1htwa_ 5 TQYIPDEFSMLRFGKKFAEILLKLHTEKAIMVYLNGDLGAGKTTLTRGMLQGIGH 59 (158)
T ss_dssp EEEECSHHHHHHHHHHHHHHHHHHCCSSCEEEEEECSTTSSHHHHHHHHHHHTTC
T ss_pred eeeCCCHHHHHHHHHHHHHHHHhccCCCCeEEEEecCCCccHHHHHHHHHhhccc
Confidence 3445566555554333322 22233 699999999999999999999854
No 144
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin (Saguinus oedipus) [TaxId: 9490]}
Probab=96.02 E-value=0.013 Score=43.79 Aligned_cols=22 Identities=27% Similarity=0.496 Sum_probs=19.6
Q ss_pred EEEeCCCCccHHHHHHHHHHHh
Q 020071 49 LILAGPPGTGKTTSILALAHEL 70 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l 70 (331)
+++.|.+|+|||+++..+...-
T Consensus 7 ivlvG~~~vGKTsli~~~~~~~ 28 (168)
T d1u8za_ 7 VIMVGSGGVGKSALTLQFMYDE 28 (168)
T ss_dssp EEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCcCHHHHHHHHHhCC
Confidence 8999999999999999987643
No 145
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance regulator, CFTR, nucleotide-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=95.99 E-value=0.013 Score=47.81 Aligned_cols=23 Identities=35% Similarity=0.622 Sum_probs=20.9
Q ss_pred EEEeCCCCccHHHHHHHHHHHhc
Q 020071 49 LILAGPPGTGKTTSILALAHELL 71 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l~ 71 (331)
+.|.||.|+||||+++.++..+.
T Consensus 65 vaivG~nGsGKSTLl~~i~Gl~~ 87 (281)
T d1r0wa_ 65 LAITGSTGSGKTSLLMLILGELE 87 (281)
T ss_dssp EEEEESTTSSHHHHHHHHHTSSC
T ss_pred EEEECCCCChHHHHHHHHhCCCc
Confidence 78999999999999999988664
No 146
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=95.96 E-value=0.002 Score=49.21 Aligned_cols=23 Identities=30% Similarity=0.638 Sum_probs=21.1
Q ss_pred EEEeCCCCccHHHHHHHHHHHhc
Q 020071 49 LILAGPPGTGKTTSILALAHELL 71 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l~ 71 (331)
++|.||+|+||+|+++.+.+...
T Consensus 5 ivl~GpsG~GK~tl~~~L~~~~~ 27 (182)
T d1znwa1 5 VVLSGPSAVGKSTVVRCLRERIP 27 (182)
T ss_dssp EEEECSTTSSHHHHHHHHHHHST
T ss_pred EEEECCCCCCHHHHHHHHHhhCC
Confidence 69999999999999999998863
No 147
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.93 E-value=0.0067 Score=46.11 Aligned_cols=22 Identities=18% Similarity=0.376 Sum_probs=20.0
Q ss_pred EEEeCCCCccHHHHHHHHHHHh
Q 020071 49 LILAGPPGTGKTTSILALAHEL 70 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l 70 (331)
+++.|.+|+|||+++..+...-
T Consensus 8 ivviG~~~vGKTsli~~~~~~~ 29 (183)
T d1mh1a_ 8 CVVVGDGAVGKTCLLISYTTNA 29 (183)
T ss_dssp EEEECSTTSSHHHHHHHHHHSS
T ss_pred EEEECCCCCCHHHHHHHHHhCC
Confidence 7999999999999999988754
No 148
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=95.90 E-value=0.027 Score=41.94 Aligned_cols=22 Identities=23% Similarity=0.555 Sum_probs=19.7
Q ss_pred EEEeCCCCccHHHHHHHHHHHh
Q 020071 49 LILAGPPGTGKTTSILALAHEL 70 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l 70 (331)
+++.|.+|+|||+++..+...-
T Consensus 7 i~lvG~~~vGKTsll~~~~~~~ 28 (169)
T d1x1ra1 7 LVVVGDGGVGKSALTIQFFQKI 28 (169)
T ss_dssp EEEECCTTSSHHHHHHHHHHSS
T ss_pred EEEECCCCcCHHHHHHHHHhCC
Confidence 7999999999999999998753
No 149
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.89 E-value=0.0084 Score=45.06 Aligned_cols=21 Identities=29% Similarity=0.605 Sum_probs=19.2
Q ss_pred EEEeCCCCccHHHHHHHHHHH
Q 020071 49 LILAGPPGTGKTTSILALAHE 69 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~ 69 (331)
+++.|++|+|||+++..+...
T Consensus 6 ivvvG~~~vGKTsli~r~~~~ 26 (173)
T d2a5ja1 6 YIIIGDTGVGKSCLLLQFTDK 26 (173)
T ss_dssp EEEESSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHhcC
Confidence 789999999999999998765
No 150
>d1xp8a1 c.37.1.11 (A:15-282) RecA protein, ATPase-domain {Deinococcus radiodurans [TaxId: 1299]}
Probab=95.89 E-value=0.012 Score=47.62 Aligned_cols=48 Identities=25% Similarity=0.340 Sum_probs=32.3
Q ss_pred HHHHHHcCCCCe---EEEeCCCCccHHHHHHHHHHHhcCCCCCCceEEeecCC
Q 020071 37 LGIIARDGNMPN---LILAGPPGTGKTTSILALAHELLGPNYREAVMELNASD 86 (331)
Q Consensus 37 l~~~l~~~~~~~---~ll~G~~G~GKt~la~~l~~~l~~~~~~~~~~~~~~~~ 86 (331)
|...+..|.+|. ..|+||+|+|||+++..++.....+ +..++.++...
T Consensus 45 lD~~Lg~GGip~g~itei~G~~~sGKT~l~l~~~~~aqk~--g~~v~yiDtE~ 95 (268)
T d1xp8a1 45 LDLALGVGGIPRGRITEIYGPESGGKTTLALAIVAQAQKA--GGTCAFIDAEH 95 (268)
T ss_dssp HHHHTSSSSEETTSEEEEEESTTSSHHHHHHHHHHHHHHT--TCCEEEEESSC
T ss_pred HHHHhcCCCccCceEEEEecCCccchHHHHHHHHHHHHhC--CCEEEEEECCc
Confidence 334443354433 5999999999999999998876544 33456666543
No 151
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.87 E-value=0.0058 Score=46.00 Aligned_cols=23 Identities=22% Similarity=0.514 Sum_probs=20.2
Q ss_pred EEEeCCCCccHHHHHHHHHHHhc
Q 020071 49 LILAGPPGTGKTTSILALAHELL 71 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l~ 71 (331)
+++.|.+|+|||+++..+...-.
T Consensus 9 v~lvG~~~vGKTsLi~r~~~~~f 31 (173)
T d2fn4a1 9 LVVVGGGGVGKSALTIQFIQSYF 31 (173)
T ss_dssp EEEEECTTSSHHHHHHHHHHSSC
T ss_pred EEEECCCCcCHHHHHHHHHhCCC
Confidence 89999999999999999887543
No 152
>d2b8ta1 c.37.1.24 (A:11-149) Thymidine kinase, TK1, N-terminal domain {Ureaplasma urealyticum [TaxId: 2130]}
Probab=95.84 E-value=0.02 Score=41.29 Aligned_cols=89 Identities=15% Similarity=0.176 Sum_probs=48.8
Q ss_pred EEeCCCCccHHH-HHHHHHHHhcCCCCCCceEEeecCCC-C----------------ChHhHHHHHHHHHhcccCCCCCC
Q 020071 50 ILAGPPGTGKTT-SILALAHELLGPNYREAVMELNASDD-R----------------GIDVVRNKIKMFAQKKVTLPPGK 111 (331)
Q Consensus 50 ll~G~~G~GKt~-la~~l~~~l~~~~~~~~~~~~~~~~~-~----------------~~~~i~~~i~~~~~~~~~~~~~~ 111 (331)
+++||=.+|||+ +.+.+.+...+ +..++.+++... + ......+.+........ ...
T Consensus 6 ~i~GpMfsGKTteLi~~~~~~~~~---~~kv~~ikp~~D~R~~~~i~s~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~ 79 (139)
T d2b8ta1 6 FITGPMFAGKTAELIRRLHRLEYA---DVKYLVFKPKIDTRSIRNIQSRTGTSLPSVEVESAPEILNYIMSNSF---NDE 79 (139)
T ss_dssp EEECSTTSCHHHHHHHHHHHHHHT---TCCEEEEEECCCGGGCSSCCCCCCCSSCCEEESSTHHHHHHHHSTTS---CTT
T ss_pred EEEccccCHHHHHHHHHHHHHHHC---CCcEEEEEEcccccccceEEcccCceeeeEEeccchhhHHHHHhhcc---ccC
Confidence 899999999998 55555443322 223333333211 0 01122233333322222 345
Q ss_pred ceEEEEeCCCCCCHHHHHHHHHHHHHhcCCcEEEEe
Q 020071 112 HKVVVLDEADSMTAGAQQALRRTMEIYSNSTRFALA 147 (331)
Q Consensus 112 ~~vviide~d~l~~~~~~~Ll~~le~~~~~~~~I~~ 147 (331)
..+|+|||++.++. ....+...+.+.. ..+++.
T Consensus 80 ~dvI~IDE~QFf~d-~i~~~~~~~~~~g--~~Viv~ 112 (139)
T d2b8ta1 80 TKVIGIDEVQFFDD-RICEVANILAENG--FVVIIS 112 (139)
T ss_dssp CCEEEECSGGGSCT-HHHHHHHHHHHTT--CEEEEE
T ss_pred cCEEEechhhhcch-hHHHHHHHHHhcC--ceEEEE
Confidence 78999999999974 4556666666533 344554
No 153
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=95.84 E-value=0.014 Score=43.64 Aligned_cols=22 Identities=23% Similarity=0.496 Sum_probs=19.8
Q ss_pred EEEeCCCCccHHHHHHHHHHHh
Q 020071 49 LILAGPPGTGKTTSILALAHEL 70 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l 70 (331)
+++.|++|+|||+++..+...-
T Consensus 8 i~vvG~~~vGKTsLi~~l~~~~ 29 (169)
T d3raba_ 8 ILIIGNSSVGKTSFLFRYADDS 29 (169)
T ss_dssp EEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCcCHHHHHHHHHcCC
Confidence 7999999999999999998753
No 154
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium extorquens [TaxId: 408]}
Probab=95.82 E-value=0.0056 Score=51.22 Aligned_cols=38 Identities=34% Similarity=0.501 Sum_probs=31.2
Q ss_pred EEEeCCCCccHHHHHHHHHHHhcCCCCCCceEEeecCC
Q 020071 49 LILAGPPGTGKTTSILALAHELLGPNYREAVMELNASD 86 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l~~~~~~~~~~~~~~~~ 86 (331)
+=++||||+||||++..+.+.+.+.+....++.++++.
T Consensus 54 igitG~pGaGKSTli~~l~~~~~~~g~~vaViavDpss 91 (323)
T d2qm8a1 54 VGITGVPGVGKSTTIDALGSLLTAAGHKVAVLAVDPSS 91 (323)
T ss_dssp EEEECCTTSCHHHHHHHHHHHHHHTTCCEEEEEECGGG
T ss_pred EeeeCCCCCCHHHHHHHHHHHHhhcCCceeeeeccccc
Confidence 79999999999999999999887666666666666543
No 155
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.77 E-value=0.019 Score=42.59 Aligned_cols=22 Identities=23% Similarity=0.419 Sum_probs=19.7
Q ss_pred EEEeCCCCccHHHHHHHHHHHh
Q 020071 49 LILAGPPGTGKTTSILALAHEL 70 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l 70 (331)
+++.|.+|+|||++++.+...-
T Consensus 7 ivlvG~~~vGKTsli~~~~~~~ 28 (166)
T d1z0fa1 7 YIIIGDMGVGKSCLLHQFTEKK 28 (166)
T ss_dssp EEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCcCHHHHHHHHHhCC
Confidence 7899999999999999998753
No 156
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL2 [TaxId: 10090]}
Probab=95.76 E-value=0.0085 Score=44.53 Aligned_cols=99 Identities=18% Similarity=0.186 Sum_probs=51.8
Q ss_pred eEEEeCCCCccHHHHHHHHHHHhcCCC---CCCceEEeecC-------CCCChHhHHHHHHHHHhcccCCCCCCceEEEE
Q 020071 48 NLILAGPPGTGKTTSILALAHELLGPN---YREAVMELNAS-------DDRGIDVVRNKIKMFAQKKVTLPPGKHKVVVL 117 (331)
Q Consensus 48 ~~ll~G~~G~GKt~la~~l~~~l~~~~---~~~~~~~~~~~-------~~~~~~~i~~~i~~~~~~~~~~~~~~~~vvii 117 (331)
.++|.|++|+|||++++.+...-.... .+.....++.. +..|.+..+..... .......-++++
T Consensus 4 ki~ivG~~~~GKTsLi~~l~~~~~~~~~~t~~~~~~~~~~~~~~~~~~D~~G~~~~~~~~~~------~~~~~~~~i~v~ 77 (165)
T d1ksha_ 4 RLLMLGLDNAGKTTILKKFNGEDVDTISPTLGFNIKTLEHRGFKLNIWDVGGQKSLRSYWRN------YFESTDGLIWVV 77 (165)
T ss_dssp EEEEECSTTSSHHHHHHHHTTCCCSSCCCCSSEEEEEEEETTEEEEEEEECCSHHHHTTGGG------GCTTCSEEEEEE
T ss_pred EEEEECCCCCCHHHHHHHHcCCCCCcccceEeeeeeeccccccceeeeecCcchhhhhHHHh------hhhhhhcceeee
Confidence 389999999999999999865432211 11112222211 11232222221111 112345667788
Q ss_pred eCCCCCCH-HHHHHHHHHHHH-hcCCcEEEEeeCCCC
Q 020071 118 DEADSMTA-GAQQALRRTMEI-YSNSTRFALACNVSS 152 (331)
Q Consensus 118 de~d~l~~-~~~~~Ll~~le~-~~~~~~~I~~~~~~~ 152 (331)
|-.+.-+- +..+.+...+.. ...+.+++++.|...
T Consensus 78 d~~d~~~~~~~~~~~~~~~~~~~~~~~p~iiv~nK~D 114 (165)
T d1ksha_ 78 DSADRQRMQDCQRELQSLLVEERLAGATLLIFANKQD 114 (165)
T ss_dssp ETTCGGGHHHHHHHHHHHHTCGGGTTCEEEEEEECTT
T ss_pred ecccchhHHHHHHhhhhhhhhcccCCCceEEEEeccc
Confidence 77766543 334445555543 235677788777643
No 157
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter {Thermotoga maritima, TM1139 [TaxId: 2336]}
Probab=95.73 E-value=0.034 Score=44.14 Aligned_cols=43 Identities=12% Similarity=0.143 Sum_probs=31.3
Q ss_pred CCceEEEEeCC-CCCCHHHHHHHHHHHHHhc-CCcEEEEeeCCCC
Q 020071 110 GKHKVVVLDEA-DSMTAGAQQALRRTMEIYS-NSTRFALACNVSS 152 (331)
Q Consensus 110 ~~~~vviide~-d~l~~~~~~~Ll~~le~~~-~~~~~I~~~~~~~ 152 (331)
.+++++++||. -.+.+.....+.+++.+.. .++.+|+++.+..
T Consensus 156 ~~P~lLllDEPt~gLD~~~~~~i~~~i~~l~~~g~til~~tH~l~ 200 (240)
T d1ji0a_ 156 SRPKLLMMDEPSLGLAPILVSEVFEVIQKINQEGTTILLVEQNAL 200 (240)
T ss_dssp TCCSEEEEECTTTTCCHHHHHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred hCCCEeeecCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 56899999996 5678888888888887543 3455677776543
No 158
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.71 E-value=0.0081 Score=45.23 Aligned_cols=22 Identities=23% Similarity=0.487 Sum_probs=19.7
Q ss_pred EEEeCCCCccHHHHHHHHHHHh
Q 020071 49 LILAGPPGTGKTTSILALAHEL 70 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l 70 (331)
+++.|++|+|||+++..+...-
T Consensus 7 i~vvG~~~vGKTsLi~~~~~~~ 28 (175)
T d2f9la1 7 VVLIGDSGVGKSNLLSRFTRNE 28 (175)
T ss_dssp EEEESSTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCcCHHHHHHHHHhCC
Confidence 7999999999999999987743
No 159
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.70 E-value=0.013 Score=43.90 Aligned_cols=21 Identities=24% Similarity=0.526 Sum_probs=19.2
Q ss_pred EEEeCCCCccHHHHHHHHHHH
Q 020071 49 LILAGPPGTGKTTSILALAHE 69 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~ 69 (331)
+++.|.+|+|||+++..+...
T Consensus 8 I~lvG~~~vGKTsll~~~~~~ 28 (174)
T d2bmea1 8 FLVIGNAGTGKSCLLHQFIEK 28 (174)
T ss_dssp EEEEESTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 799999999999999998764
No 160
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=95.70 E-value=0.0055 Score=46.50 Aligned_cols=23 Identities=22% Similarity=0.473 Sum_probs=20.4
Q ss_pred EEEeCCCCccHHHHHHHHHHHhc
Q 020071 49 LILAGPPGTGKTTSILALAHELL 71 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l~ 71 (331)
++|.|++|+|||+++..+...-.
T Consensus 5 ivliG~~~vGKTsli~r~~~~~f 27 (179)
T d1m7ba_ 5 IVVVGDSQCGKTALLHVFAKDCF 27 (179)
T ss_dssp EEEEESTTSSHHHHHHHHHHSCC
T ss_pred EEEECCCCcCHHHHHHHHHhCCC
Confidence 79999999999999999987643
No 161
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Probab=95.63 E-value=0.027 Score=43.41 Aligned_cols=23 Identities=22% Similarity=0.297 Sum_probs=20.6
Q ss_pred eEEEeCCCCccHHHHHHHHHHHh
Q 020071 48 NLILAGPPGTGKTTSILALAHEL 70 (331)
Q Consensus 48 ~~ll~G~~G~GKt~la~~l~~~l 70 (331)
+++|.|++|+|||++...+...-
T Consensus 2 ~V~ivG~~~~GKTsLl~~l~~~~ 24 (207)
T d2fh5b1 2 AVLFVGLCDSGKTLLFVRLLTGQ 24 (207)
T ss_dssp EEEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHHcCC
Confidence 58999999999999999998753
No 162
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId: 562]}
Probab=95.60 E-value=0.0051 Score=47.93 Aligned_cols=23 Identities=35% Similarity=0.544 Sum_probs=21.2
Q ss_pred EEEeCCCCccHHHHHHHHHHHhc
Q 020071 49 LILAGPPGTGKTTSILALAHELL 71 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l~ 71 (331)
++|+||+|+||+++.+.+.+...
T Consensus 5 ivi~GPSG~GK~tl~~~L~~~~p 27 (205)
T d1s96a_ 5 YIVSAPSGAGKSSLIQALLKTQP 27 (205)
T ss_dssp EEEECCTTSCHHHHHHHHHHHSC
T ss_pred EEEECCCCCCHHHHHHHHHhhCC
Confidence 79999999999999999999864
No 163
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.60 E-value=0.0066 Score=46.29 Aligned_cols=23 Identities=22% Similarity=0.462 Sum_probs=20.3
Q ss_pred EEEeCCCCccHHHHHHHHHHHhc
Q 020071 49 LILAGPPGTGKTTSILALAHELL 71 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l~ 71 (331)
+++.|.+|+|||+++..+...-.
T Consensus 12 i~lvG~~~vGKTsLi~r~~~~~f 34 (185)
T d2atxa1 12 CVVVGDGAVGKTCLLMSYANDAF 34 (185)
T ss_dssp EEEEECTTSSHHHHHHHHHHSSC
T ss_pred EEEECCCCCCHHHHHHHHhhCCC
Confidence 79999999999999999887543
No 164
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga maritima [TaxId: 2336]}
Probab=95.57 E-value=0.013 Score=46.59 Aligned_cols=42 Identities=12% Similarity=0.224 Sum_probs=30.1
Q ss_pred CCceEEEEeCC-CCCCHHHHHHHHHHHHHhc-CCcEEEEeeCCC
Q 020071 110 GKHKVVVLDEA-DSMTAGAQQALRRTMEIYS-NSTRFALACNVS 151 (331)
Q Consensus 110 ~~~~vviide~-d~l~~~~~~~Ll~~le~~~-~~~~~I~~~~~~ 151 (331)
.+++++++||. ..+.+.....+.+++.+.. .+..+|+++.+.
T Consensus 150 ~~p~illLDEPt~gLD~~~~~~i~~~i~~~~~~g~tii~~tH~l 193 (238)
T d1vpla_ 150 VNPRLAILDEPTSGLDVLNAREVRKILKQASQEGLTILVSSHNM 193 (238)
T ss_dssp TCCSEEEEESTTTTCCHHHHHHHHHHHHHHHHTTCEEEEEECCH
T ss_pred cCCCEEEecCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCH
Confidence 56899999995 5677777777777776543 345677777654
No 165
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.51 E-value=0.0046 Score=48.31 Aligned_cols=27 Identities=26% Similarity=0.362 Sum_probs=23.3
Q ss_pred EEEeCCCCccHHHHHHHHHHHhcCCCC
Q 020071 49 LILAGPPGTGKTTSILALAHELLGPNY 75 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l~~~~~ 75 (331)
+.|.|+.|+||||.++.+++.+.+.+.
T Consensus 6 I~ieG~dGsGKsT~~~~L~~~L~~~g~ 32 (209)
T d1nn5a_ 6 IVLEGVDRAGKSTQSRKLVEALCAAGH 32 (209)
T ss_dssp EEEEESTTSSHHHHHHHHHHHHHHTTC
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCC
Confidence 688899999999999999999865533
No 166
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli [TaxId: 562]}
Probab=95.51 E-value=0.016 Score=47.91 Aligned_cols=39 Identities=23% Similarity=0.242 Sum_probs=27.7
Q ss_pred CCCe-EEEeCCCCccHHHHHHHHHHHhcCCCCCCceEEee
Q 020071 45 NMPN-LILAGPPGTGKTTSILALAHELLGPNYREAVMELN 83 (331)
Q Consensus 45 ~~~~-~ll~G~~G~GKt~la~~l~~~l~~~~~~~~~~~~~ 83 (331)
+.|- +-+.|++|+||||+|+.+...+.....+..+..+.
T Consensus 78 k~P~iIGIaG~sgSGKSTla~~L~~lL~~~~~~~~v~~Is 117 (308)
T d1sq5a_ 78 RIPYIISIAGSVAVGKSTTARVLQALLSRWPEHRRVELIT 117 (308)
T ss_dssp CCCEEEEEEECTTSSHHHHHHHHHHHHTTSTTCCCEEEEE
T ss_pred CCCEEEEEeCCCCCCCcHHHHHHHHHHhhhcCCCceEEEe
Confidence 3444 58999999999999999999885433233344433
No 167
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.50 E-value=0.013 Score=43.73 Aligned_cols=22 Identities=23% Similarity=0.507 Sum_probs=19.8
Q ss_pred EEEeCCCCccHHHHHHHHHHHh
Q 020071 49 LILAGPPGTGKTTSILALAHEL 70 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l 70 (331)
++|.|.+|+|||+++..+...-
T Consensus 8 i~lvG~~~vGKTsLi~r~~~~~ 29 (171)
T d2erya1 8 LVVVGGGGVGKSALTIQFIQSY 29 (171)
T ss_dssp EEEEECTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCCCHHHHHHHHHhCC
Confidence 8999999999999999988753
No 168
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli [TaxId: 562]}
Probab=95.48 E-value=0.0065 Score=47.35 Aligned_cols=27 Identities=26% Similarity=0.373 Sum_probs=23.4
Q ss_pred EEEeCCCCccHHHHHHHHHHHhcCCCC
Q 020071 49 LILAGPPGTGKTTSILALAHELLGPNY 75 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l~~~~~ 75 (331)
+.|.|++|+||||.++.+++.+...+.
T Consensus 5 IviEG~dGsGKsT~~~~L~~~L~~~g~ 31 (210)
T d4tmka_ 5 IVIEGLEGAGKTTARNVVVETLEQLGI 31 (210)
T ss_dssp EEEEECTTSCHHHHHHHHHHHHHHTTC
T ss_pred EEEECCCCCCHHHHHHHHHHHHHhCCC
Confidence 689999999999999999998865543
No 169
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.45 E-value=0.0045 Score=47.08 Aligned_cols=24 Identities=25% Similarity=0.351 Sum_probs=21.3
Q ss_pred eEEEeCCCCccHHHHHHHHHHHhc
Q 020071 48 NLILAGPPGTGKTTSILALAHELL 71 (331)
Q Consensus 48 ~~ll~G~~G~GKt~la~~l~~~l~ 71 (331)
.++|.||+|+||+++.+.+.+...
T Consensus 5 ~ivl~Gpsg~GK~tl~~~L~~~~~ 28 (178)
T d1kgda_ 5 TLVLLGAHGVGRRHIKNTLITKHP 28 (178)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHCT
T ss_pred cEEEECCCCCCHHHHHHHHHHhCC
Confidence 379999999999999999998753
No 170
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.42 E-value=0.0064 Score=45.63 Aligned_cols=21 Identities=43% Similarity=0.521 Sum_probs=17.5
Q ss_pred EEEeCCCCccHHHHHHHHHHH
Q 020071 49 LILAGPPGTGKTTSILALAHE 69 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~ 69 (331)
+++.|++|+|||+++..+...
T Consensus 6 i~vvG~~~vGKTsli~~~~~~ 26 (170)
T d1i2ma_ 6 LVLVGDGGTGKTTFVKRHLTG 26 (170)
T ss_dssp EEEEECTTSSHHHHHHTTC--
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 789999999999999887654
No 171
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.39 E-value=0.014 Score=43.45 Aligned_cols=23 Identities=22% Similarity=0.548 Sum_probs=20.5
Q ss_pred EEEeCCCCccHHHHHHHHHHHhc
Q 020071 49 LILAGPPGTGKTTSILALAHELL 71 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l~ 71 (331)
+++.|.+|+|||+++..+...-.
T Consensus 6 ivvvG~~~vGKTsli~r~~~~~f 28 (167)
T d1c1ya_ 6 LVVLGSGGVGKSALTVQFVQGIF 28 (167)
T ss_dssp EEEECSTTSSHHHHHHHHHHCCC
T ss_pred EEEECCCCCCHHHHHHHHHcCCC
Confidence 79999999999999999987643
No 172
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.37 E-value=0.019 Score=42.73 Aligned_cols=21 Identities=29% Similarity=0.536 Sum_probs=18.8
Q ss_pred EEEeCCCCccHHHHHHHHHHH
Q 020071 49 LILAGPPGTGKTTSILALAHE 69 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~ 69 (331)
+++.|++|+|||++++.+...
T Consensus 4 i~lvG~~~vGKTsLi~~~~~~ 24 (168)
T d2gjsa1 4 VLLLGAPGVGKSALARIFGGV 24 (168)
T ss_dssp EEEECCTTSSHHHHHHHHHTC
T ss_pred EEEECCCCcCHHHHHHHHhCC
Confidence 789999999999999988754
No 173
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.36 E-value=0.02 Score=42.82 Aligned_cols=22 Identities=27% Similarity=0.421 Sum_probs=19.6
Q ss_pred EEEeCCCCccHHHHHHHHHHHh
Q 020071 49 LILAGPPGTGKTTSILALAHEL 70 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l 70 (331)
+++.|++|+|||+++..+...-
T Consensus 9 I~vvG~~~vGKSSli~~~~~~~ 30 (174)
T d1wmsa_ 9 VILLGDGGVGKSSLMNRYVTNK 30 (174)
T ss_dssp EEEECCTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCCCHHHHHHHHHhCC
Confidence 7999999999999999887743
No 174
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.35 E-value=0.0053 Score=47.95 Aligned_cols=23 Identities=17% Similarity=0.267 Sum_probs=20.9
Q ss_pred EEEeCCCCccHHHHHHHHHHHhc
Q 020071 49 LILAGPPGTGKTTSILALAHELL 71 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l~ 71 (331)
+-+.|++|+||||+++.+++.+.
T Consensus 5 IgI~G~~gSGKSTla~~L~~~l~ 27 (213)
T d1uj2a_ 5 IGVSGGTASGKSSVCAKIVQLLG 27 (213)
T ss_dssp EEEECSTTSSHHHHHHHHHHHTT
T ss_pred EEEECCCCCCHHHHHHHHHHHhc
Confidence 46999999999999999999874
No 175
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.33 E-value=0.013 Score=43.68 Aligned_cols=21 Identities=24% Similarity=0.501 Sum_probs=18.9
Q ss_pred EEEeCCCCccHHHHHHHHHHH
Q 020071 49 LILAGPPGTGKTTSILALAHE 69 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~ 69 (331)
+++.|.+|+|||+++..+...
T Consensus 5 i~viG~~~vGKTsLi~r~~~~ 25 (171)
T d2erxa1 5 VAVFGAGGVGKSSLVLRFVKG 25 (171)
T ss_dssp EEEECCTTSSHHHHHHHHHTC
T ss_pred EEEECCCCCCHHHHHHHHHhC
Confidence 789999999999999988764
No 176
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.29 E-value=0.034 Score=41.34 Aligned_cols=21 Identities=29% Similarity=0.575 Sum_probs=19.3
Q ss_pred EEEeCCCCccHHHHHHHHHHH
Q 020071 49 LILAGPPGTGKTTSILALAHE 69 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~ 69 (331)
+++.|++|+|||+++..+...
T Consensus 9 i~vvG~~~vGKTsli~~~~~~ 29 (170)
T d2g6ba1 9 VMLVGDSGVGKTCLLVRFKDG 29 (170)
T ss_dssp EEEECSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 799999999999999988774
No 177
>d1ewqa2 c.37.1.12 (A:542-765) DNA repair protein MutS, the C-terminal domain {Thermus aquaticus [TaxId: 271]}
Probab=95.29 E-value=0.088 Score=41.12 Aligned_cols=98 Identities=20% Similarity=0.212 Sum_probs=49.9
Q ss_pred EEEeCCCCccHHHHHHHHHHHhc-CC-CC------------CCceEEeecCCCC--ChHhHHHHHHHHHhcccCCCCCCc
Q 020071 49 LILAGPPGTGKTTSILALAHELL-GP-NY------------REAVMELNASDDR--GIDVVRNKIKMFAQKKVTLPPGKH 112 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l~-~~-~~------------~~~~~~~~~~~~~--~~~~i~~~i~~~~~~~~~~~~~~~ 112 (331)
++++||...|||++.+.++-... .+ ++ +.-+..++..+.. +.......+.......-. .+++
T Consensus 38 ~iiTGpN~~GKSt~lk~i~l~~ilAq~G~~vpA~~~~i~~~d~I~~~~~~~d~~~~~~StF~~el~~~~~il~~--~~~~ 115 (224)
T d1ewqa2 38 VLITGPNMAGKSTFLRQTALIALLAQVGSFVPAEEAHLPLFDGIYTRIGASDDLAGGKSTFMVEMEEVALILKE--ATEN 115 (224)
T ss_dssp EEEESCSSSSHHHHHHHHHHHHHHHTTTCCBSSSEEEECCCSEEEEECCC------CCSHHHHHHHHHHHHHHH--CCTT
T ss_pred EEEECCCccccchhhhhhHHHHHHHhccceeecCceEEeecceEEEEECCCccccCCccHHHHhHHHHHHHhcc--CCCC
Confidence 69999999999999998876542 11 10 1111222222221 111111111111111100 2457
Q ss_pred eEEEEeCCCCCCHH-----HHHHHHHHHHHhcCCcEEEEeeCC
Q 020071 113 KVVVLDEADSMTAG-----AQQALRRTMEIYSNSTRFALACNV 150 (331)
Q Consensus 113 ~vviide~d~l~~~-----~~~~Ll~~le~~~~~~~~I~~~~~ 150 (331)
.+|+|||+.+-+.. ...++++.+.+. ++.++++|..
T Consensus 116 sLvliDE~~~gT~~~eg~ala~aile~L~~~--~~~~i~tTH~ 156 (224)
T d1ewqa2 116 SLVLLDEVGRGTSSLDGVAIATAVAEALHER--RAYTLFATHY 156 (224)
T ss_dssp EEEEEESTTTTSCHHHHHHHHHHHHHHHHHH--TCEEEEECCC
T ss_pred cEEeecccccCcchhhhcchHHHHHHHHhhc--CcceEEeeec
Confidence 89999999877532 244556666554 3455666654
No 178
>d1g5ta_ c.37.1.11 (A:) ATP:corrinoid adenosyltransferase CobA {Salmonella typhimurium [TaxId: 90371]}
Probab=95.24 E-value=0.11 Score=37.97 Aligned_cols=51 Identities=16% Similarity=0.134 Sum_probs=37.2
Q ss_pred CCCceEEEEeCC------CCCCHHHHHHHHHHHHHhcCCcEEEEeeCCCCCCChhhhccccee
Q 020071 109 PGKHKVVVLDEA------DSMTAGAQQALRRTMEIYSNSTRFALACNVSSKIIEPIQSRCAIV 165 (331)
Q Consensus 109 ~~~~~vviide~------d~l~~~~~~~Ll~~le~~~~~~~~I~~~~~~~~l~~~l~sr~~~i 165 (331)
.+.+.+||+||+ ..++. +.++++++..|..+-+|+|.++. ++.|..++..+
T Consensus 92 ~~~~dllILDEi~~Ai~~gli~~---~~v~~ll~~rp~~~evVlTGr~~---p~~L~e~ADlV 148 (157)
T d1g5ta_ 92 DPLLDMVVLDELTYMVAYDYLPL---EEVISALNARPGHQTVIITGRGC---HRDILDLADTV 148 (157)
T ss_dssp CTTCSEEEEETHHHHHHTTSSCH---HHHHHHHHTSCTTCEEEEECSSC---CHHHHHHCSEE
T ss_pred cCccCEEeHHHHHHHHHcCCCCH---HHHHHHHHhCCCCCEEEEECCCC---CHHHHHhccee
Confidence 567899999996 34443 57888888889999999998653 45566655433
No 179
>d1rifa_ c.37.1.23 (A:) DNA helicase UvsW {Bacteriophage T4 [TaxId: 10665]}
Probab=95.23 E-value=0.026 Score=46.07 Aligned_cols=42 Identities=19% Similarity=0.039 Sum_probs=32.7
Q ss_pred cccCHHHHHHHHHHHHcCCCCeEEEeCCCCccHHHHHHHHHHHhc
Q 020071 27 IVGNLDAVARLGIIARDGNMPNLILAGPPGTGKTTSILALAHELL 71 (331)
Q Consensus 27 ~ig~~~~~~~l~~~l~~~~~~~~ll~G~~G~GKt~la~~l~~~l~ 71 (331)
+.-++.....+..+++.++ .++.-|.|+|||.++-.+++.+.
T Consensus 112 ~~~rdyQ~~av~~~l~~~~---~il~~pTGsGKT~i~~~i~~~~~ 153 (282)
T d1rifa_ 112 IEPHWYQKDAVFEGLVNRR---RILNLPTSAGRSLIQALLARYYL 153 (282)
T ss_dssp CCCCHHHHHHHHHHHHHSE---EEECCCTTSCHHHHHHHHHHHHH
T ss_pred cccchHHHHHHHHHHhcCC---ceeEEEcccCccHHHHHHHHHhh
Confidence 4457778888888888754 68888999999988887776553
No 180
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF6 [TaxId: 9606]}
Probab=95.21 E-value=0.0088 Score=44.92 Aligned_cols=21 Identities=29% Similarity=0.466 Sum_probs=18.6
Q ss_pred eEEEeCCCCccHHHHHHHHHH
Q 020071 48 NLILAGPPGTGKTTSILALAH 68 (331)
Q Consensus 48 ~~ll~G~~G~GKt~la~~l~~ 68 (331)
.+++.|++|+|||++++.+..
T Consensus 14 kIvlvG~~~vGKTSli~rl~~ 34 (173)
T d1e0sa_ 14 RILMLGLDAAGKTTILYKLKL 34 (173)
T ss_dssp EEEEEEETTSSHHHHHHHTTC
T ss_pred EEEEECCCCCCHHHHHHHHhc
Confidence 389999999999999998764
No 181
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.19 E-value=0.008 Score=46.00 Aligned_cols=23 Identities=17% Similarity=0.375 Sum_probs=20.2
Q ss_pred EEEeCCCCccHHHHHHHHHHHhc
Q 020071 49 LILAGPPGTGKTTSILALAHELL 71 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l~ 71 (331)
+++.|++|+|||+++..+...-.
T Consensus 6 vvllG~~~vGKTSli~r~~~~~f 28 (191)
T d2ngra_ 6 CVVVGDGAVGKTCLLISYTTNKF 28 (191)
T ss_dssp EEEEESTTSSHHHHHHHHHHSCC
T ss_pred EEEECCCCcCHHHHHHHHHhCCC
Confidence 78999999999999999887543
No 182
>d1wb9a2 c.37.1.12 (A:567-800) DNA repair protein MutS, the C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=95.19 E-value=0.077 Score=41.81 Aligned_cols=22 Identities=36% Similarity=0.416 Sum_probs=19.9
Q ss_pred EEEeCCCCccHHHHHHHHHHHh
Q 020071 49 LILAGPPGTGKTTSILALAHEL 70 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l 70 (331)
++++||...|||++.+.++-..
T Consensus 44 ~iiTGpN~~GKSt~lk~i~l~~ 65 (234)
T d1wb9a2 44 LIITGPNMGGKSTYMRQTALIA 65 (234)
T ss_dssp EEEECCTTSSHHHHHHHHHHHH
T ss_pred EEEeccCchhhHHHHHHHHHHH
Confidence 6999999999999999997754
No 183
>d2i1qa2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic domain {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=95.19 E-value=0.0044 Score=49.35 Aligned_cols=35 Identities=26% Similarity=0.250 Sum_probs=26.1
Q ss_pred HHHHHHcCCCCe--EEEeCCCCccHHHHHHHHHHHhc
Q 020071 37 LGIIARDGNMPN--LILAGPPGTGKTTSILALAHELL 71 (331)
Q Consensus 37 l~~~l~~~~~~~--~ll~G~~G~GKt~la~~l~~~l~ 71 (331)
|.+.+..|-.+. ++|+|+||+|||+++..++..+.
T Consensus 23 LD~ll~GGl~~G~l~~i~G~~G~GKT~~~l~~a~~~~ 59 (258)
T d2i1qa2 23 LDSVLGGGLESQSVTEFAGVFGSGKTQIMHQSCVNLQ 59 (258)
T ss_dssp HHHHTTSSEETTEEEEEEESTTSSHHHHHHHHHHHTT
T ss_pred HHHhcCCCccCCeEEEEEeCCCCCHHHHHHHHHHHHH
Confidence 444444443332 59999999999999999998764
No 184
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.18 E-value=0.012 Score=45.16 Aligned_cols=22 Identities=32% Similarity=0.644 Sum_probs=19.7
Q ss_pred EEEeCCCCccHHHHHHHHHHHh
Q 020071 49 LILAGPPGTGKTTSILALAHEL 70 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l 70 (331)
+++.|++|+|||+++..+...-
T Consensus 9 ivvvG~~~vGKTsli~~l~~~~ 30 (194)
T d2bcgy1 9 LLLIGNSGVGKSCLLLRFSDDT 30 (194)
T ss_dssp EEEEESTTSSHHHHHHHHHHCC
T ss_pred EEEECCCCcCHHHHHHHHhhCC
Confidence 7999999999999999988653
No 185
>d2bmfa2 c.37.1.14 (A:178-482) Dengue virus helicase {Dengue virus type 2 [TaxId: 11060]}
Probab=95.15 E-value=0.052 Score=44.29 Aligned_cols=19 Identities=16% Similarity=0.289 Sum_probs=15.2
Q ss_pred CCCceEEEEeCCCCCCHHH
Q 020071 109 PGKHKVVVLDEADSMTAGA 127 (331)
Q Consensus 109 ~~~~~vviide~d~l~~~~ 127 (331)
..+..++||||+|.+....
T Consensus 98 ~~~~~~vViDE~H~~~~~~ 116 (305)
T d2bmfa2 98 VPNYNLIIMDEAHFTDPAS 116 (305)
T ss_dssp CCCCSEEEEESTTCCSHHH
T ss_pred ccceeEEEeeeeeecchhh
Confidence 3457899999999997654
No 186
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=95.14 E-value=0.044 Score=43.86 Aligned_cols=52 Identities=12% Similarity=0.191 Sum_probs=35.0
Q ss_pred CCceEEEEeCC-CCCCHHHHHHHHHHHHHh-cCCcEEEEeeCCCCCCChhhhccc
Q 020071 110 GKHKVVVLDEA-DSMTAGAQQALRRTMEIY-SNSTRFALACNVSSKIIEPIQSRC 162 (331)
Q Consensus 110 ~~~~vviide~-d~l~~~~~~~Ll~~le~~-~~~~~~I~~~~~~~~l~~~l~sr~ 162 (331)
.+++++++||. -.+.......+.+.+.+. ..++.+|+++.+.+.+. .+-+|.
T Consensus 167 ~~P~llilDEPt~gLD~~~~~~i~~~i~~l~~~g~til~vsHdl~~~~-~~~Drv 220 (254)
T d1g6ha_ 167 TNPKMIVMDEPIAGVAPGLAHDIFNHVLELKAKGITFLIIEHRLDIVL-NYIDHL 220 (254)
T ss_dssp TCCSEEEEESTTTTCCHHHHHHHHHHHHHHHHTTCEEEEECSCCSTTG-GGCSEE
T ss_pred hCcCchhhcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHH-HhCCEE
Confidence 46899999996 466777777777777654 24567777877766554 334443
No 187
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34 {Garden pea (Pisum sativum) [TaxId: 3888]}
Probab=95.10 E-value=0.093 Score=41.93 Aligned_cols=34 Identities=18% Similarity=0.349 Sum_probs=24.4
Q ss_pred HHHHHHHcCCCCe--EEEeCCCCccHHHHHHHHHHH
Q 020071 36 RLGIIARDGNMPN--LILAGPPGTGKTTSILALAHE 69 (331)
Q Consensus 36 ~l~~~l~~~~~~~--~ll~G~~G~GKt~la~~l~~~ 69 (331)
.+...++...... ++|.|.+|+|||++...+...
T Consensus 20 e~~~~l~~~~~~~l~I~LvG~tg~GKSSliN~ilg~ 55 (257)
T d1h65a_ 20 ELLGNLKQEDVNSLTILVMGKGGVGKSSTVNSIIGE 55 (257)
T ss_dssp HHHHHHHHTTCCEEEEEEEESTTSSHHHHHHHHHTS
T ss_pred HHHHHHhhcCCCCcEEEEECCCCCcHHHHHHHHhCC
Confidence 3444444433223 899999999999999999764
No 188
>d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=95.09 E-value=0.0043 Score=49.04 Aligned_cols=33 Identities=24% Similarity=0.327 Sum_probs=23.2
Q ss_pred HHHHHHcCCCCe--EEEeCCCCccHHHHHHHHHHH
Q 020071 37 LGIIARDGNMPN--LILAGPPGTGKTTSILALAHE 69 (331)
Q Consensus 37 l~~~l~~~~~~~--~ll~G~~G~GKt~la~~l~~~ 69 (331)
|.+.+.+|-.+. ++|+|+||+|||+++..++..
T Consensus 15 LD~~l~GGi~~G~~~~I~G~~G~GKT~la~~~~~~ 49 (242)
T d1tf7a1 15 FDDISHGGLPIGRSTLVSGTSGTGKTLFSIQFLYN 49 (242)
T ss_dssp HHHHTTSSEETTSEEEEEESTTSSHHHHHHHHHHH
T ss_pred HHHhhcCCCcCCeEEEEEeCCCCCHHHHHHHHHHH
Confidence 344444443333 699999999999999876643
No 189
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=95.07 E-value=0.036 Score=41.04 Aligned_cols=23 Identities=22% Similarity=0.485 Sum_probs=20.2
Q ss_pred EEEeCCCCccHHHHHHHHHHHhc
Q 020071 49 LILAGPPGTGKTTSILALAHELL 71 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l~ 71 (331)
+++.|.+|+|||++++.+...-.
T Consensus 7 i~lvG~~~vGKTsli~rl~~~~f 29 (167)
T d1z0ja1 7 VCLLGDTGVGKSSIMWRFVEDSF 29 (167)
T ss_dssp EEEECCTTSSHHHHHHHHHHSCC
T ss_pred EEEECCCCcCHHHHHHHHHhCCC
Confidence 78999999999999999987543
No 190
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=95.04 E-value=0.012 Score=45.56 Aligned_cols=25 Identities=24% Similarity=0.405 Sum_probs=22.3
Q ss_pred EEEeCCCCccHHHHHHHHHHHhcCC
Q 020071 49 LILAGPPGTGKTTSILALAHELLGP 73 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l~~~ 73 (331)
+.|.|..|+||||+++.+.+.+...
T Consensus 3 I~ieG~dGsGKST~~~~L~~~l~~~ 27 (208)
T d1gsia_ 3 IAIEGVDGAGKRTLVEKLSGAFRAA 27 (208)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHC
Confidence 5789999999999999999988654
No 191
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.02 E-value=0.022 Score=42.53 Aligned_cols=22 Identities=27% Similarity=0.514 Sum_probs=19.6
Q ss_pred EEEeCCCCccHHHHHHHHHHHh
Q 020071 49 LILAGPPGTGKTTSILALAHEL 70 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l 70 (331)
+++.|++|+|||+++..+...-
T Consensus 5 i~~vG~~~vGKSsLi~~~~~~~ 26 (175)
T d1ky3a_ 5 VIILGDSGVGKTSLMHRYVNDK 26 (175)
T ss_dssp EEEECCTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCcCHHHHHHHHHcCC
Confidence 7999999999999999987643
No 192
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=94.89 E-value=0.0049 Score=47.42 Aligned_cols=27 Identities=26% Similarity=0.363 Sum_probs=23.0
Q ss_pred CCCe-EEEeCCCCccHHHHHHHHHHHhc
Q 020071 45 NMPN-LILAGPPGTGKTTSILALAHELL 71 (331)
Q Consensus 45 ~~~~-~ll~G~~G~GKt~la~~l~~~l~ 71 (331)
.-|- +.|.|+.|+||||+++.+++.+.
T Consensus 7 ~kp~~I~ieG~~GsGKTTl~~~L~~~l~ 34 (197)
T d2vp4a1 7 TQPFTVLIEGNIGSGKTTYLNHFEKYKN 34 (197)
T ss_dssp CCCEEEEEECSTTSCHHHHHHTTGGGTT
T ss_pred CCceEEEEECCCCCCHHHHHHHHHHHhC
Confidence 3344 69999999999999999999873
No 193
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12 uptake, BtuD {Escherichia coli [TaxId: 562]}
Probab=94.76 E-value=0.05 Score=42.82 Aligned_cols=41 Identities=17% Similarity=0.321 Sum_probs=28.6
Q ss_pred CceEEEEeCC-CCCCHHHHHHHHHHHHHh-cCCcEEEEeeCCC
Q 020071 111 KHKVVVLDEA-DSMTAGAQQALRRTMEIY-SNSTRFALACNVS 151 (331)
Q Consensus 111 ~~~vviide~-d~l~~~~~~~Ll~~le~~-~~~~~~I~~~~~~ 151 (331)
+++++++||. ..+.......+.+++.+. ..++.+|+++.+.
T Consensus 150 ~p~llllDEPt~gLD~~~~~~i~~~i~~l~~~g~tii~vtHdl 192 (231)
T d1l7vc_ 150 AGQLLLLDEPMNSLDVAQQSALDKILSALCQQGLAIVMSSHDL 192 (231)
T ss_dssp TCCEEEESSCSTTCCHHHHHHHHHHHHHHHHTTCEEEECCCCH
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4589999995 566777777777777754 2455677776653
No 194
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor beta-subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=94.76 E-value=0.0092 Score=46.13 Aligned_cols=24 Identities=38% Similarity=0.740 Sum_probs=21.5
Q ss_pred CeEEEeCCCCccHHHHHHHHHHHh
Q 020071 47 PNLILAGPPGTGKTTSILALAHEL 70 (331)
Q Consensus 47 ~~~ll~G~~G~GKt~la~~l~~~l 70 (331)
|.++|.|++|+|||++...+...-
T Consensus 4 p~V~lvG~~n~GKTSLln~l~~~~ 27 (209)
T d1nrjb_ 4 PSIIIAGPQNSGKTSLLTLLTTDS 27 (209)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHSS
T ss_pred CEEEEECCCCCCHHHHHHHHhCCC
Confidence 569999999999999999998753
No 195
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=94.73 E-value=0.046 Score=40.51 Aligned_cols=22 Identities=27% Similarity=0.502 Sum_probs=19.7
Q ss_pred EEEeCCCCccHHHHHHHHHHHh
Q 020071 49 LILAGPPGTGKTTSILALAHEL 70 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l 70 (331)
+++.|++|+|||+++..+...-
T Consensus 6 i~vvG~~~vGKTsLi~~~~~~~ 27 (170)
T d1ek0a_ 6 LVLLGEAAVGKSSIVLRFVSND 27 (170)
T ss_dssp EEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCcCHHHHHHHHHhCC
Confidence 7899999999999999988754
No 196
>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain {Lactobacillus casei [TaxId: 1582]}
Probab=94.66 E-value=0.0094 Score=44.91 Aligned_cols=21 Identities=29% Similarity=0.675 Sum_probs=19.4
Q ss_pred EEEeCCCCccHHHHHHHHHHH
Q 020071 49 LILAGPPGTGKTTSILALAHE 69 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~ 69 (331)
++|.|++|+|||++|..+.+.
T Consensus 17 vl~~G~sG~GKStlal~l~~~ 37 (176)
T d1kkma_ 17 VLITGDSGVGKSETALELVQR 37 (176)
T ss_dssp EEEECCTTSCHHHHHHHHHHT
T ss_pred EEEEeCCCCCHHHHHHHHHHc
Confidence 899999999999999998874
No 197
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955 {Pyrococcus abyssi [TaxId: 29292]}
Probab=94.57 E-value=0.01 Score=46.96 Aligned_cols=23 Identities=30% Similarity=0.456 Sum_probs=20.8
Q ss_pred EEEeCCCCccHHHHHHHHHHHhc
Q 020071 49 LILAGPPGTGKTTSILALAHELL 71 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l~ 71 (331)
+++.|++|+||||+...+.+.+.
T Consensus 3 i~v~G~~GsGKTTLl~~ll~~~~ 25 (244)
T d1yrba1 3 VVFVGTAGSGKTTLTGEFGRYLE 25 (244)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHT
T ss_pred EEEEcCCCCcHHHHHHHHHHHHh
Confidence 58999999999999999998763
No 198
>d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=94.56 E-value=0.013 Score=46.07 Aligned_cols=34 Identities=21% Similarity=0.300 Sum_probs=25.3
Q ss_pred HHHHHHHHHHcCCCCeEEEeCCCCccHHHHHHHHHHH
Q 020071 33 AVARLGIIARDGNMPNLILAGPPGTGKTTSILALAHE 69 (331)
Q Consensus 33 ~~~~l~~~l~~~~~~~~ll~G~~G~GKt~la~~l~~~ 69 (331)
-+..|+..+++ + ..+|.|++|+|||+++.++...
T Consensus 85 g~~~L~~~l~~-k--t~~~~G~SGVGKSTLiN~L~~~ 118 (225)
T d1u0la2 85 GIEELKEYLKG-K--ISTMAGLSGVGKSSLLNAINPG 118 (225)
T ss_dssp THHHHHHHHSS-S--EEEEECSTTSSHHHHHHHHSTT
T ss_pred hHhhHHHHhcC-C--eEEEECCCCCCHHHHHHhhcch
Confidence 35566666643 2 3699999999999999988654
No 199
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=94.50 E-value=0.049 Score=42.31 Aligned_cols=24 Identities=33% Similarity=0.371 Sum_probs=22.0
Q ss_pred eEEEeCCCCccHHHHHHHHHHHhc
Q 020071 48 NLILAGPPGTGKTTSILALAHELL 71 (331)
Q Consensus 48 ~~ll~G~~G~GKt~la~~l~~~l~ 71 (331)
-+.|.|+.|+||||.++.+++.+.
T Consensus 5 ~I~iEG~DGsGKST~~~~L~~~L~ 28 (214)
T d1tmka_ 5 LILIEGLDRTGKTTQCNILYKKLQ 28 (214)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHTT
T ss_pred EEEEECCCCCcHHHHHHHHHHHHH
Confidence 379999999999999999999984
No 200
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=94.44 E-value=0.07 Score=39.50 Aligned_cols=21 Identities=29% Similarity=0.578 Sum_probs=18.5
Q ss_pred EEEeCCCCccHHHHHHHHHHH
Q 020071 49 LILAGPPGTGKTTSILALAHE 69 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~ 69 (331)
+.+.|++|+|||++++++...
T Consensus 3 V~liG~~n~GKSsLi~~L~~~ 23 (171)
T d1mkya1 3 VLIVGRPNVGKSTLFNKLVKK 23 (171)
T ss_dssp EEEECCTTSSHHHHHHHHHC-
T ss_pred EEEECCCCCCHHHHHHHHhCC
Confidence 789999999999999999743
No 201
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=94.35 E-value=0.029 Score=41.54 Aligned_cols=22 Identities=23% Similarity=0.569 Sum_probs=19.7
Q ss_pred EEEeCCCCccHHHHHHHHHHHh
Q 020071 49 LILAGPPGTGKTTSILALAHEL 70 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l 70 (331)
+++.|++|+|||+++..+...-
T Consensus 5 i~vvG~~~vGKTSli~~l~~~~ 26 (166)
T d1g16a_ 5 ILLIGDSGVGKSCLLVRFVEDK 26 (166)
T ss_dssp EEEEESTTSSHHHHHHHHHHCC
T ss_pred EEEECCCCcCHHHHHHHHHhCC
Confidence 7899999999999999988753
No 202
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARL1 [TaxId: 9606]}
Probab=94.35 E-value=0.012 Score=43.38 Aligned_cols=22 Identities=32% Similarity=0.477 Sum_probs=19.9
Q ss_pred EEEeCCCCccHHHHHHHHHHHh
Q 020071 49 LILAGPPGTGKTTSILALAHEL 70 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l 70 (331)
++|.|.+|+|||++.+.+...-
T Consensus 8 I~ivG~~~vGKSSLi~~~~~~~ 29 (169)
T d1upta_ 8 ILILGLDGAGKTTILYRLQVGE 29 (169)
T ss_dssp EEEECSTTSSHHHHHHHHHHSS
T ss_pred EEEECCCCCCHHHHHHHHhCCC
Confidence 7999999999999999997753
No 203
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=94.29 E-value=0.049 Score=40.53 Aligned_cols=22 Identities=32% Similarity=0.650 Sum_probs=8.5
Q ss_pred EEEeCCCCccHHHHHHHHHHHh
Q 020071 49 LILAGPPGTGKTTSILALAHEL 70 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l 70 (331)
+++.|.+|+|||+++..+...-
T Consensus 9 i~vvG~~~vGKTsLi~~l~~~~ 30 (173)
T d2fu5c1 9 LLLIGDSGVGKTCVLFRFSEDA 30 (173)
T ss_dssp EEEECCCCC-------------
T ss_pred EEEECCCCcCHHHHHHHHHhCC
Confidence 7899999999999999887543
No 204
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=94.28 E-value=0.014 Score=43.79 Aligned_cols=21 Identities=33% Similarity=0.510 Sum_probs=19.0
Q ss_pred EEEeCCCCccHHHHHHHHHHH
Q 020071 49 LILAGPPGTGKTTSILALAHE 69 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~ 69 (331)
++|.|++|+|||++...+...
T Consensus 16 I~lvG~~~vGKTsLl~~l~~~ 36 (186)
T d1f6ba_ 16 LVFLGLDNAGKTTLLHMLKDD 36 (186)
T ss_dssp EEEEEETTSSHHHHHHHHSCC
T ss_pred EEEECCCCCCHHHHHHHHhCC
Confidence 899999999999999988654
No 205
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis [TaxId: 1423]}
Probab=94.24 E-value=0.012 Score=45.01 Aligned_cols=25 Identities=36% Similarity=0.663 Sum_probs=21.7
Q ss_pred CCCCeEEEeCCCCccHHHHHHHHHH
Q 020071 44 GNMPNLILAGPPGTGKTTSILALAH 68 (331)
Q Consensus 44 ~~~~~~ll~G~~G~GKt~la~~l~~ 68 (331)
+..|.+.|.|++|+||||+...+..
T Consensus 21 ~~~~~I~lvG~~n~GKSTLin~L~g 45 (195)
T d1svia_ 21 GGLPEIALAGRSNVGKSSFINSLIN 45 (195)
T ss_dssp SCCCEEEEEEBTTSSHHHHHHHHHT
T ss_pred CCCCEEEEECCCCCCHHHHHHHhcC
Confidence 3456799999999999999999974
No 206
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=94.21 E-value=0.014 Score=42.81 Aligned_cols=22 Identities=32% Similarity=0.462 Sum_probs=20.0
Q ss_pred EEEeCCCCccHHHHHHHHHHHh
Q 020071 49 LILAGPPGTGKTTSILALAHEL 70 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l 70 (331)
++|.|++|+|||+++..+...-
T Consensus 3 I~liG~~nvGKSSLln~l~~~~ 24 (166)
T d2qtvb1 3 LLFLGLDNAGKTTLLHMLKNDR 24 (166)
T ss_dssp EEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCCCHHHHHHHHhCCC
Confidence 7999999999999999998753
No 207
>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain {Mycoplasma pneumoniae [TaxId: 2104]}
Probab=94.17 E-value=0.009 Score=45.02 Aligned_cols=21 Identities=33% Similarity=0.653 Sum_probs=19.2
Q ss_pred EEEeCCCCccHHHHHHHHHHH
Q 020071 49 LILAGPPGTGKTTSILALAHE 69 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~ 69 (331)
++|.|++|+|||++|..+.+.
T Consensus 18 vli~G~sG~GKS~lal~l~~~ 38 (177)
T d1knxa2 18 VLLTGRSGIGKSECALDLINK 38 (177)
T ss_dssp EEEEESSSSSHHHHHHHHHTT
T ss_pred EEEEcCCCCCHHHHHHHHHHc
Confidence 899999999999999988764
No 208
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=94.10 E-value=0.038 Score=44.99 Aligned_cols=23 Identities=26% Similarity=0.716 Sum_probs=19.8
Q ss_pred EEEeCCCCccHHHHHHHHHHHhc
Q 020071 49 LILAGPPGTGKTTSILALAHELL 71 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l~ 71 (331)
+-|.|++|+||||++..+...+.
T Consensus 30 IGi~G~qGSGKSTl~~~l~~~L~ 52 (286)
T d1odfa_ 30 IFFSGPQGSGKSFTSIQIYNHLM 52 (286)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHH
T ss_pred EEeECCCCCCHHHHHHHHHHHHH
Confidence 46899999999999998887763
No 209
>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain {Staphylococcus xylosus [TaxId: 1288]}
Probab=94.04 E-value=0.012 Score=43.96 Aligned_cols=21 Identities=29% Similarity=0.642 Sum_probs=19.5
Q ss_pred EEEeCCCCccHHHHHHHHHHH
Q 020071 49 LILAGPPGTGKTTSILALAHE 69 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~ 69 (331)
++|.|++|+|||+++..+.+.
T Consensus 18 vli~G~sg~GKS~la~~l~~~ 38 (169)
T d1ko7a2 18 VLITGDSGIGKSETALELIKR 38 (169)
T ss_dssp EEEEESTTSSHHHHHHHHHHT
T ss_pred EEEEeCCCCCHHHHHHHHHHc
Confidence 899999999999999888875
No 210
>d1uaaa1 c.37.1.19 (A:2-307) DEXX box DNA helicase {Escherichia coli, RepD [TaxId: 562]}
Probab=93.79 E-value=0.028 Score=46.06 Aligned_cols=18 Identities=28% Similarity=0.405 Sum_probs=14.8
Q ss_pred eEEEeCCCCccHHHHHHH
Q 020071 48 NLILAGPPGTGKTTSILA 65 (331)
Q Consensus 48 ~~ll~G~~G~GKt~la~~ 65 (331)
++++.|+||+|||+++-.
T Consensus 16 ~~lI~g~aGTGKTt~l~~ 33 (306)
T d1uaaa1 16 PCLVLAGAGSGKTRVITN 33 (306)
T ss_dssp EEEECCCTTSCHHHHHHH
T ss_pred CEEEEeeCCccHHHHHHH
Confidence 489999999999976543
No 211
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.79 E-value=0.019 Score=42.66 Aligned_cols=22 Identities=27% Similarity=0.427 Sum_probs=19.8
Q ss_pred EEEeCCCCccHHHHHHHHHHHh
Q 020071 49 LILAGPPGTGKTTSILALAHEL 70 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l 70 (331)
++|.|.+|+|||+++..+...-
T Consensus 6 ivlvG~~~vGKTsLi~r~~~~~ 27 (167)
T d1z08a1 6 VVLLGEGCVGKTSLVLRYCENK 27 (167)
T ss_dssp EEEECCTTSCHHHHHHHHHHCC
T ss_pred EEEECCCCcCHHHHHHHHHhCC
Confidence 7999999999999999988744
No 212
>d1pjra1 c.37.1.19 (A:1-318) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=93.74 E-value=0.048 Score=44.93 Aligned_cols=23 Identities=26% Similarity=0.440 Sum_probs=17.0
Q ss_pred eEEEeCCCCccHHHHHH-HHHHHh
Q 020071 48 NLILAGPPGTGKTTSIL-ALAHEL 70 (331)
Q Consensus 48 ~~ll~G~~G~GKt~la~-~l~~~l 70 (331)
++++.|++|+|||+++- .+++.+
T Consensus 26 ~~lV~g~aGSGKTt~l~~ri~~ll 49 (318)
T d1pjra1 26 PLLIMAGAGSGKTRVLTHRIAYLM 49 (318)
T ss_dssp CEEEEECTTSCHHHHHHHHHHHHH
T ss_pred CEEEEecCCccHHHHHHHHHHHHH
Confidence 48999999999997554 444444
No 213
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.73 E-value=0.017 Score=45.78 Aligned_cols=24 Identities=25% Similarity=0.299 Sum_probs=22.1
Q ss_pred EEEeCCCCccHHHHHHHHHHHhcC
Q 020071 49 LILAGPPGTGKTTSILALAHELLG 72 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l~~ 72 (331)
+.|.|+.|+||||+++.+++.+..
T Consensus 5 IviEG~~GsGKST~~~~L~~~l~~ 28 (241)
T d2ocpa1 5 LSIEGNIAVGKSTFVKLLTKTYPE 28 (241)
T ss_dssp EEEEECTTSSHHHHHHHHHHHCTT
T ss_pred EEEECCCCCcHHHHHHHHHHHHhh
Confidence 699999999999999999999854
No 214
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.72 E-value=0.02 Score=42.65 Aligned_cols=22 Identities=23% Similarity=0.454 Sum_probs=20.0
Q ss_pred EEEeCCCCccHHHHHHHHHHHh
Q 020071 49 LILAGPPGTGKTTSILALAHEL 70 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l 70 (331)
+++.|++|+|||+++..+...-
T Consensus 5 i~lvG~~~vGKTsli~r~~~~~ 26 (168)
T d2atva1 5 LAIFGRAGVGKSALVVRFLTKR 26 (168)
T ss_dssp EEEECCTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCCCHHHHHHHHHhCC
Confidence 7999999999999999998754
No 215
>d1oywa2 c.37.1.19 (A:1-206) RecQ helicase domain {Escherichia coli [TaxId: 562]}
Probab=93.69 E-value=0.029 Score=43.22 Aligned_cols=21 Identities=24% Similarity=0.324 Sum_probs=17.0
Q ss_pred eEEEeCCCCccHHHHHHHHHH
Q 020071 48 NLILAGPPGTGKTTSILALAH 68 (331)
Q Consensus 48 ~~ll~G~~G~GKt~la~~l~~ 68 (331)
++++.-|+|+|||.+......
T Consensus 42 ~vlv~apTGsGKT~~~~~~~~ 62 (206)
T d1oywa2 42 DCLVVMPTGGGKSLCYQIPAL 62 (206)
T ss_dssp CEEEECSCHHHHHHHHHHHHH
T ss_pred CEEEEcCCCCCCcchhhhhhh
Confidence 599999999999987654443
No 216
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=93.59 E-value=0.009 Score=48.80 Aligned_cols=27 Identities=19% Similarity=0.342 Sum_probs=20.1
Q ss_pred CeEEEeCCCCccHHHHHHHHHHHhcCC
Q 020071 47 PNLILAGPPGTGKTTSILALAHELLGP 73 (331)
Q Consensus 47 ~~~ll~G~~G~GKt~la~~l~~~l~~~ 73 (331)
|-+-++|++|+||||+++.+.+.+...
T Consensus 5 pIIgIaG~SGSGKTTva~~l~~i~~~~ 31 (288)
T d1a7ja_ 5 PIISVTGSSGAGTSTVKHTFDQIFRRE 31 (288)
T ss_dssp CEEEEESCC---CCTHHHHHHHHHHHH
T ss_pred CEEEEECCCCCcHHHHHHHHHHHHhhc
Confidence 447999999999999999999887543
No 217
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.43 E-value=0.021 Score=43.20 Aligned_cols=21 Identities=33% Similarity=0.531 Sum_probs=18.7
Q ss_pred EEEeCCCCccHHHHHHHHHHH
Q 020071 49 LILAGPPGTGKTTSILALAHE 69 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~ 69 (331)
+++.|++|+|||+++..+...
T Consensus 8 i~ivG~~~vGKTsLi~~l~~~ 28 (186)
T d2f7sa1 8 LLALGDSGVGKTTFLYRYTDN 28 (186)
T ss_dssp EEEESCTTSSHHHHHHHHHCS
T ss_pred EEEECCCCcCHHHHHHHHhcC
Confidence 799999999999999988753
No 218
>d1e2ka_ c.37.1.1 (A:) Thymidine kinase {Herpes simplex virus type 1, different strains [TaxId: 10298]}
Probab=93.43 E-value=0.097 Score=43.38 Aligned_cols=23 Identities=35% Similarity=0.430 Sum_probs=19.0
Q ss_pred EEEeCCCCccHHHHHHHHHHHhc
Q 020071 49 LILAGPPGTGKTTSILALAHELL 71 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l~ 71 (331)
+.|-|+-|+||||+++.+++.+.
T Consensus 7 I~IEG~iGsGKTTl~~~La~~l~ 29 (329)
T d1e2ka_ 7 VYIDGPHGMGKTTTTQLLVALGS 29 (329)
T ss_dssp EEECSCTTSSHHHHHHHHTC---
T ss_pred EEEECCcCCCHHHHHHHHHHHhC
Confidence 68999999999999999998763
No 219
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=93.39 E-value=0.024 Score=41.85 Aligned_cols=22 Identities=23% Similarity=0.330 Sum_probs=19.9
Q ss_pred EEEeCCCCccHHHHHHHHHHHh
Q 020071 49 LILAGPPGTGKTTSILALAHEL 70 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l 70 (331)
+++.|.+|+|||+++..+...-
T Consensus 5 v~liG~~~vGKTsLl~~~~~~~ 26 (165)
T d1z06a1 5 IIVIGDSNVGKTCLTYRFCAGR 26 (165)
T ss_dssp EEEECCTTSSHHHHHHHHHHSS
T ss_pred EEEECCCCcCHHHHHHHHHhCC
Confidence 7999999999999999998753
No 220
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=93.34 E-value=0.025 Score=42.77 Aligned_cols=21 Identities=29% Similarity=0.537 Sum_probs=19.2
Q ss_pred EEEeCCCCccHHHHHHHHHHH
Q 020071 49 LILAGPPGTGKTTSILALAHE 69 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~ 69 (331)
+++.|.+|+|||+++..+...
T Consensus 5 v~vvG~~~vGKSSLi~~l~~~ 25 (184)
T d1vg8a_ 5 VIILGDSGVGKTSLMNQYVNK 25 (184)
T ss_dssp EEEECCTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 799999999999999998864
No 221
>d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.32 E-value=0.01 Score=47.04 Aligned_cols=24 Identities=21% Similarity=0.235 Sum_probs=21.8
Q ss_pred eEEEeCCCCccHHHHHHHHHHHhc
Q 020071 48 NLILAGPPGTGKTTSILALAHELL 71 (331)
Q Consensus 48 ~~ll~G~~G~GKt~la~~l~~~l~ 71 (331)
-+.|.|+.|+||||+++.+++.+.
T Consensus 4 ~I~ieG~dGsGKST~~~~L~~~l~ 27 (241)
T d1p5zb_ 4 KISIEGNIAAGKSTFVNILKQLCE 27 (241)
T ss_dssp EEEEECSTTSSHHHHHTTTGGGCT
T ss_pred EEEEECCCCCCHHHHHHHHHHHHh
Confidence 379999999999999999999874
No 222
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus furiosus [TaxId: 2261]}
Probab=93.29 E-value=0.019 Score=44.25 Aligned_cols=23 Identities=35% Similarity=0.527 Sum_probs=20.7
Q ss_pred EEEeCCCCccHHHHHHHHHHHhc
Q 020071 49 LILAGPPGTGKTTSILALAHELL 71 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l~ 71 (331)
+.|.||.|+||||+.+.++..+.
T Consensus 30 ~~l~G~NGsGKSTLl~~i~gl~~ 52 (200)
T d1sgwa_ 30 VNFHGPNGIGKTTLLKTISTYLK 52 (200)
T ss_dssp EEEECCTTSSHHHHHHHHTTSSC
T ss_pred EEEECCCCChHHHHHHHHhcccc
Confidence 68999999999999999988663
No 223
>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=93.17 E-value=0.032 Score=45.45 Aligned_cols=38 Identities=29% Similarity=0.391 Sum_probs=27.9
Q ss_pred CCe-EEEeCCCCccHHHHHHHHHHHhcCCCCCCceEEee
Q 020071 46 MPN-LILAGPPGTGKTTSILALAHELLGPNYREAVMELN 83 (331)
Q Consensus 46 ~~~-~ll~G~~G~GKt~la~~l~~~l~~~~~~~~~~~~~ 83 (331)
.|. ++++|.-|+||||++-.++..+...+...-.+..+
T Consensus 7 ~p~~i~~sGKGGVGKTTvaa~lA~~lA~~G~rVLlvD~D 45 (296)
T d1ihua1 7 IPPYLFFTGKGGVGKTSISCATAIRLAEQGKRVLLVSTD 45 (296)
T ss_dssp CCSEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCeEEEEECCCcChHHHHHHHHHHHHHHCCCCEEEEeCC
Confidence 455 69999999999999999999886654443333333
No 224
>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=92.94 E-value=0.067 Score=43.13 Aligned_cols=40 Identities=28% Similarity=0.248 Sum_probs=28.6
Q ss_pred HHHHHHcCCCCeEEEeCCCCccHHHHHHHHHHHhcCCCCC
Q 020071 37 LGIIARDGNMPNLILAGPPGTGKTTSILALAHELLGPNYR 76 (331)
Q Consensus 37 l~~~l~~~~~~~~ll~G~~G~GKt~la~~l~~~l~~~~~~ 76 (331)
+...+..+...-++++|.-|+||||++-.++..+...+..
T Consensus 11 ~~~~~~~~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~r 50 (279)
T d1ihua2 11 LVDDIARNEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFD 50 (279)
T ss_dssp HHHHHHTTSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCC
T ss_pred HHHHhhcCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCc
Confidence 3444444442236999999999999999999988765443
No 225
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.91 E-value=0.025 Score=41.90 Aligned_cols=22 Identities=14% Similarity=0.295 Sum_probs=19.6
Q ss_pred EEEeCCCCccHHHHHHHHHHHh
Q 020071 49 LILAGPPGTGKTTSILALAHEL 70 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l 70 (331)
+++.|++|+|||+++..+...-
T Consensus 7 v~liG~~~vGKTsLl~~~~~~~ 28 (167)
T d1xtqa1 7 IAILGYRSVGKSSLTIQFVEGQ 28 (167)
T ss_dssp EEEEESTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCcCHHHHHHHHHhCC
Confidence 8999999999999999987643
No 226
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus [TaxId: 274]}
Probab=92.91 E-value=0.032 Score=42.40 Aligned_cols=20 Identities=30% Similarity=0.429 Sum_probs=17.5
Q ss_pred EEEeCCCCccHHHHHHHHHH
Q 020071 49 LILAGPPGTGKTTSILALAH 68 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~ 68 (331)
+-++|++|+||||+|..+.+
T Consensus 6 IgitG~~gSGKstva~~l~~ 25 (191)
T d1uf9a_ 6 IGITGNIGSGKSTVAALLRS 25 (191)
T ss_dssp EEEEECTTSCHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHH
Confidence 46899999999999998854
No 227
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.90 E-value=0.031 Score=41.90 Aligned_cols=22 Identities=23% Similarity=0.637 Sum_probs=19.8
Q ss_pred EEEeCCCCccHHHHHHHHHHHh
Q 020071 49 LILAGPPGTGKTTSILALAHEL 70 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l 70 (331)
+++.|.+|+|||+++..+...-
T Consensus 10 i~vvG~~~vGKTsli~~l~~~~ 31 (177)
T d1x3sa1 10 ILIIGESGVGKSSLLLRFTDDT 31 (177)
T ss_dssp EEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCcCHHHHHHHHHhCC
Confidence 7999999999999999988643
No 228
>d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA {Escherichia coli [TaxId: 562]}
Probab=92.77 E-value=0.028 Score=45.40 Aligned_cols=23 Identities=35% Similarity=0.479 Sum_probs=20.7
Q ss_pred EEEeCCCCccHHHHHHHHHHHhc
Q 020071 49 LILAGPPGTGKTTSILALAHELL 71 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l~ 71 (331)
.+|+|++|+|||+++..++..+.
T Consensus 32 ~~i~G~~G~GKS~l~l~la~~ia 54 (274)
T d1nlfa_ 32 GALVSPGGAGKSMLALQLAAQIA 54 (274)
T ss_dssp EEEEESTTSSHHHHHHHHHHHHH
T ss_pred EEEEeCCCCCHHHHHHHHHHHHH
Confidence 59999999999999999988764
No 229
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=92.74 E-value=0.32 Score=35.73 Aligned_cols=21 Identities=29% Similarity=0.521 Sum_probs=19.3
Q ss_pred EEEeCCCCccHHHHHHHHHHH
Q 020071 49 LILAGPPGTGKTTSILALAHE 69 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~ 69 (331)
+.|.|.+|+|||++..++.+.
T Consensus 8 I~iiG~~nvGKSSLin~L~~~ 28 (179)
T d1egaa1 8 IAIVGRPNVGKSTLLNKLLGQ 28 (179)
T ss_dssp EEEECSSSSSHHHHHHHHHTC
T ss_pred EEEECCCCCCHHHHHHHHhCC
Confidence 789999999999999999863
No 230
>d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]}
Probab=92.67 E-value=0.098 Score=48.06 Aligned_cols=59 Identities=17% Similarity=0.231 Sum_probs=43.5
Q ss_pred CCchhhhcCCCCCCccccCHHHHH--HHHHHHHcCCCCeEEEeCCCCccHHHHHHHHHHHh
Q 020071 12 DIPWVEKYRPTKVCDIVGNLDAVA--RLGIIARDGNMPNLILAGPPGTGKTTSILALAHEL 70 (331)
Q Consensus 12 ~~~~~~~~~p~~~~~~ig~~~~~~--~l~~~l~~~~~~~~ll~G~~G~GKt~la~~l~~~l 70 (331)
+.-+..+|+.....++--|--.+. ....+...+..-.+++.|++|+|||..++.+.+.+
T Consensus 50 ~~~~~~~y~~~~~~~~~PHif~iA~~Ay~~l~~~~~~QsIiisGeSGsGKTe~~k~il~yL 110 (684)
T d1lkxa_ 50 KESDIKAYNGRYKYEMPPHMYALANDAYRSMRQSQENQCVIISGESGAGKTEASKKIMQFL 110 (684)
T ss_dssp SHHHHHHHSSCCGGGSCCCHHHHHHHHHHHHHHHCCCEEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CHHHHHHHcCCCCCCCCChHHHHHHHHHHHHHHcCCCeEEEEEcCCCCCHHHHHHHHHHHH
Confidence 334677888776666666655553 45566666654449999999999999999999987
No 231
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.62 E-value=0.034 Score=41.47 Aligned_cols=21 Identities=33% Similarity=0.458 Sum_probs=18.8
Q ss_pred EEEeCCCCccHHHHHHHHHHH
Q 020071 49 LILAGPPGTGKTTSILALAHE 69 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~ 69 (331)
++|.|.+|+|||+++..+...
T Consensus 6 v~lvG~~~vGKTsLi~~~~~~ 26 (172)
T d2g3ya1 6 VVLIGEQGVGKSTLANIFAGV 26 (172)
T ss_dssp EEEECCTTSSHHHHHHHHHCC
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 799999999999999988753
No 232
>d1cr2a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase), helicase domain {Bacteriophage T7 [TaxId: 10760]}
Probab=92.49 E-value=0.055 Score=43.67 Aligned_cols=22 Identities=23% Similarity=0.373 Sum_probs=19.7
Q ss_pred EEEeCCCCccHHHHHHHHHHHh
Q 020071 49 LILAGPPGTGKTTSILALAHEL 70 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l 70 (331)
++|.|+||+|||+++..++..+
T Consensus 38 ~vi~G~~G~GKT~~~~~la~~~ 59 (277)
T d1cr2a_ 38 IMVTSGSGMGKSTFVRQQALQW 59 (277)
T ss_dssp EEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEEeCCCCCHHHHHHHHHHhh
Confidence 5999999999999999998654
No 233
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=92.38 E-value=0.045 Score=44.20 Aligned_cols=24 Identities=25% Similarity=0.505 Sum_probs=20.7
Q ss_pred eE-EEeCCCCccHHHHHHHHHHHhc
Q 020071 48 NL-ILAGPPGTGKTTSILALAHELL 71 (331)
Q Consensus 48 ~~-ll~G~~G~GKt~la~~l~~~l~ 71 (331)
++ +|+|+.|+|||++..++.-.+.
T Consensus 24 ~ln~IvG~NGsGKStiL~Ai~~~l~ 48 (292)
T g1f2t.1 24 GINLIIGQNGSGKSSLLDAILVGLY 48 (292)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHHH
T ss_pred CeEEEECCCCCCHHHHHHHHHHHhc
Confidence 45 9999999999999999986654
No 234
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL3 [TaxId: 10090]}
Probab=92.37 E-value=0.029 Score=41.91 Aligned_cols=20 Identities=40% Similarity=0.541 Sum_probs=18.2
Q ss_pred EEEeCCCCccHHHHHHHHHH
Q 020071 49 LILAGPPGTGKTTSILALAH 68 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~ 68 (331)
+++.|++|+|||+++..+..
T Consensus 19 I~vvG~~~vGKSsLi~~l~~ 38 (176)
T d1fzqa_ 19 ILLLGLDNAGKTTLLKQLAS 38 (176)
T ss_dssp EEEEESTTSSHHHHHHHHCC
T ss_pred EEEECCCCCCHHHHHHHHhc
Confidence 89999999999999988754
No 235
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein MetN {Escherichia coli [TaxId: 562]}
Probab=92.29 E-value=0.025 Score=44.77 Aligned_cols=22 Identities=27% Similarity=0.289 Sum_probs=19.9
Q ss_pred EEEeCCCCccHHHHHHHHHHHh
Q 020071 49 LILAGPPGTGKTTSILALAHEL 70 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l 70 (331)
+-|.||+|+||||+++.++...
T Consensus 34 ~~iiG~sGsGKSTLl~~i~Gl~ 55 (240)
T d3dhwc1 34 YGVIGASGAGKSTLIRCVNLLE 55 (240)
T ss_dssp EEEEESTTSSHHHHHHHHTTSS
T ss_pred EEEECCCCCCHHHHHHHHcCCc
Confidence 7999999999999999998755
No 236
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV, N-terminal domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=92.23 E-value=0.026 Score=44.71 Aligned_cols=23 Identities=35% Similarity=0.453 Sum_probs=20.8
Q ss_pred EEEeCCCCccHHHHHHHHHHHhc
Q 020071 49 LILAGPPGTGKTTSILALAHELL 71 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l~ 71 (331)
+.+.||+|+||||+.+.++....
T Consensus 34 ~~iiG~sGsGKSTll~~i~gl~~ 56 (242)
T d1oxxk2 34 FGILGPSGAGKTTFMRIIAGLDV 56 (242)
T ss_dssp EEEECSCHHHHHHHHHHHHTSSC
T ss_pred EEEECCCCCcHHHHHHHHHcCcC
Confidence 79999999999999999998653
No 237
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=92.21 E-value=0.55 Score=39.88 Aligned_cols=21 Identities=33% Similarity=0.558 Sum_probs=19.3
Q ss_pred eEEEeCCCCccHHHHHHHHHH
Q 020071 48 NLILAGPPGTGKTTSILALAH 68 (331)
Q Consensus 48 ~~ll~G~~G~GKt~la~~l~~ 68 (331)
++.+.|.+|+|||++..++..
T Consensus 58 ~Iai~G~~n~GKSSLiNaL~G 78 (400)
T d1tq4a_ 58 NVAVTGETGSGKSSFINTLRG 78 (400)
T ss_dssp EEEEEECTTSSHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHhC
Confidence 489999999999999999974
No 238
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain {Thermus thermophilus [TaxId: 274]}
Probab=92.12 E-value=0.034 Score=41.74 Aligned_cols=22 Identities=27% Similarity=0.526 Sum_probs=19.6
Q ss_pred CeEEEeCCCCccHHHHHHHHHH
Q 020071 47 PNLILAGPPGTGKTTSILALAH 68 (331)
Q Consensus 47 ~~~ll~G~~G~GKt~la~~l~~ 68 (331)
+.+.|.|.+|+|||+++..+..
T Consensus 2 ~~VaivG~~nvGKSTLin~L~~ 23 (180)
T d1udxa2 2 ADVGLVGYPNAGKSSLLAAMTR 23 (180)
T ss_dssp CSEEEECCGGGCHHHHHHHHCS
T ss_pred CEEEEECCCCCCHHHHHHHHhC
Confidence 5688999999999999999864
No 239
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus horikoshii [TaxId: 53953]}
Probab=92.09 E-value=0.032 Score=41.92 Aligned_cols=22 Identities=36% Similarity=0.572 Sum_probs=19.5
Q ss_pred eEEEeCCCCccHHHHHHHHHHH
Q 020071 48 NLILAGPPGTGKTTSILALAHE 69 (331)
Q Consensus 48 ~~ll~G~~G~GKt~la~~l~~~ 69 (331)
.++|.|++|+|||++..++...
T Consensus 2 ~I~lvG~~nvGKSsLin~l~~~ 23 (184)
T d2cxxa1 2 TIIFAGRSNVGKSTLIYRLTGK 23 (184)
T ss_dssp EEEEEEBTTSSHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 3799999999999999999753
No 240
>d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]}
Probab=91.92 E-value=0.14 Score=47.24 Aligned_cols=57 Identities=18% Similarity=0.327 Sum_probs=41.7
Q ss_pred chhhhcCCCCCCccccCHHHHH--HHHHHHHcCCCCeEEEeCCCCccHHHHHHHHHHHh
Q 020071 14 PWVEKYRPTKVCDIVGNLDAVA--RLGIIARDGNMPNLILAGPPGTGKTTSILALAHEL 70 (331)
Q Consensus 14 ~~~~~~~p~~~~~~ig~~~~~~--~l~~~l~~~~~~~~ll~G~~G~GKt~la~~l~~~l 70 (331)
-+...|+.....++--|--.+. ..+.++..+.--.+++.|++|+|||..++.+.+.+
T Consensus 91 ~~~~~y~~~~~~~~~PHifaiA~~Ay~~m~~~~~nQsIiisGeSGaGKTe~~k~il~yL 149 (712)
T d1d0xa2 91 EMVDIFKGRRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYL 149 (712)
T ss_dssp HHHHHHTTCCGGGSCCCHHHHHHHHHHHHHHHTCCEEEEEECSTTSSHHHHHHHHHHHH
T ss_pred HHHHHHcCCCcCCCCCcHHHHHHHHHHHHHHhCCCceEEEeCCCCCCHHHHHHHHHHHH
Confidence 3566777766666666654543 44566666654449999999999999999998877
No 241
>d1z63a1 c.37.1.19 (A:432-661) Helicase of the SNF2/Rad54 hamily {Sulfolobus solfataricus [TaxId: 2287]}
Probab=91.89 E-value=0.18 Score=39.23 Aligned_cols=113 Identities=18% Similarity=0.200 Sum_probs=59.5
Q ss_pred EEEeCCCCccHHHHHHHHHHHhcCCCCCCceEEeecCCCCChHhHHHHHHHHHhccc-----------------------
Q 020071 49 LILAGPPGTGKTTSILALAHELLGPNYREAVMELNASDDRGIDVVRNKIKMFAQKKV----------------------- 105 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~----------------------- 105 (331)
.+|.=+.|.|||..+-+++..+........+..+.+.. -..++.+.+..+.....
T Consensus 34 ~iLaDe~GlGKT~~~i~~~~~~~~~~~~~~~LIv~p~~--l~~~W~~e~~~~~~~~~~~~~~~~~~~~~~~~~~vvi~~~ 111 (230)
T d1z63a1 34 ICLADDMGLGKTLQTIAVFSDAKKENELTPSLVICPLS--VLKNWEEELSKFAPHLRFAVFHEDRSKIKLEDYDIILTTY 111 (230)
T ss_dssp EEECCCTTSCHHHHHHHHHHHHHHTTCCSSEEEEECST--THHHHHHHHHHHCTTSCEEECSSSTTSCCGGGSSEEEEEH
T ss_pred EEEEeCCCCChHHHHHHhhhhhhhcccccccceecchh--hhhHHHHHHHhhcccccceeeccccchhhccCcCEEEeeH
Confidence 68888999999998888877665433333333333322 12334333332221100
Q ss_pred -------CCCCCCceEEEEeCCCCCCHHHHHHHHHHHHHhcCCcEEEEeeCCCCCCChhhhcccce
Q 020071 106 -------TLPPGKHKVVVLDEADSMTAGAQQALRRTMEIYSNSTRFALACNVSSKIIEPIQSRCAI 164 (331)
Q Consensus 106 -------~~~~~~~~vviide~d~l~~~~~~~Ll~~le~~~~~~~~I~~~~~~~~l~~~l~sr~~~ 164 (331)
.....+...||+||++.+...... -.+.+.......+++++++....=+..+.+.+..
T Consensus 112 ~~~~~~~~l~~~~~~~vI~DEah~~k~~~s~-~~~~~~~l~a~~r~~LTgTPi~n~~~dl~~ll~~ 176 (230)
T d1z63a1 112 AVLLRDTRLKEVEWKYIVIDEAQNIKNPQTK-IFKAVKELKSKYRIALTGTPIENKVDDLWSIMTF 176 (230)
T ss_dssp HHHTTCHHHHTCCEEEEEEETGGGGSCTTSH-HHHHHHTSCEEEEEEECSSCSTTCHHHHHHHHHH
T ss_pred HHHHhHHHHhcccceEEEEEhhhcccccchh-hhhhhhhhccceEEEEecchHHhHHHHHHHHHHh
Confidence 000235678999999988432211 1222333345567778776654444444444333
No 242
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit) {Cow (Bos taurus) [TaxId: 9913]}
Probab=91.59 E-value=0.12 Score=40.16 Aligned_cols=29 Identities=21% Similarity=0.172 Sum_probs=22.3
Q ss_pred EEEeCCCCccHHHHHHHHHHHhcCCCCCC
Q 020071 49 LILAGPPGTGKTTSILALAHELLGPNYRE 77 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l~~~~~~~ 77 (331)
+++.|.+|+|||++++.+...-..+..+.
T Consensus 9 illlG~~~vGKTsll~~~~~~~~~pTiG~ 37 (221)
T d1azta2 9 LLLLGAGESGKSTIVKQMRILHVVLTSGI 37 (221)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHCCCCCSC
T ss_pred EEEECCCCCCHHHHHHHHhcCCcCCCCCe
Confidence 89999999999999999865544333333
No 243
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli [TaxId: 562]}
Probab=91.50 E-value=0.057 Score=41.66 Aligned_cols=20 Identities=40% Similarity=0.539 Sum_probs=17.5
Q ss_pred EEEeCCCCccHHHHHHHHHH
Q 020071 49 LILAGPPGTGKTTSILALAH 68 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~ 68 (331)
+-++|+.|+||||+++.|.+
T Consensus 6 IgitG~igSGKStv~~~l~~ 25 (208)
T d1vhta_ 6 VALTGGIGSGKSTVANAFAD 25 (208)
T ss_dssp EEEECCTTSCHHHHHHHHHH
T ss_pred EEEECCCcCCHHHHHHHHHH
Confidence 46899999999999998764
No 244
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine permease {Salmonella typhimurium [TaxId: 90371]}
Probab=91.44 E-value=0.044 Score=43.91 Aligned_cols=22 Identities=23% Similarity=0.416 Sum_probs=19.8
Q ss_pred EEEeCCCCccHHHHHHHHHHHh
Q 020071 49 LILAGPPGTGKTTSILALAHEL 70 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l 70 (331)
+-|.||+|+||||+++.++...
T Consensus 31 ~~iiG~sGsGKSTLl~~i~Gl~ 52 (258)
T d1b0ua_ 31 ISIIGSSGSGKSTFLRCINFLE 52 (258)
T ss_dssp EEEECCTTSSHHHHHHHHTTSS
T ss_pred EEEECCCCCcHHHHHHHHHcCc
Confidence 7999999999999999998644
No 245
>d1xx6a1 c.37.1.24 (A:2-142) Thymidine kinase, TK1, N-terminal domain {Clostridium acetobutylicum [TaxId: 1488]}
Probab=91.33 E-value=0.11 Score=37.35 Aligned_cols=35 Identities=14% Similarity=0.225 Sum_probs=22.6
Q ss_pred CCceEEEEeCCCCCCHHHHHHHHHHHHHhcCCcEEEEe
Q 020071 110 GKHKVVVLDEADSMTAGAQQALRRTMEIYSNSTRFALA 147 (331)
Q Consensus 110 ~~~~vviide~d~l~~~~~~~Ll~~le~~~~~~~~I~~ 147 (331)
....+|+|||++.++......+.. +.+. +..+++.
T Consensus 79 ~~~dvI~IDE~QFf~d~~~~~~~~-l~~~--g~~Viv~ 113 (141)
T d1xx6a1 79 EDTEVIAIDEVQFFDDEIVEIVNK-IAES--GRRVICA 113 (141)
T ss_dssp TTCSEEEECSGGGSCTHHHHHHHH-HHHT--TCEEEEE
T ss_pred ccccEEEEeehhhccccHHHHHHh-heeC--CcEEEEE
Confidence 346899999999998765555544 4443 3344444
No 246
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast (Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Probab=91.33 E-value=0.03 Score=42.14 Aligned_cols=19 Identities=37% Similarity=0.649 Sum_probs=17.5
Q ss_pred EEEeCCCCccHHHHHHHHH
Q 020071 49 LILAGPPGTGKTTSILALA 67 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~ 67 (331)
+++.|++|+|||+++..+.
T Consensus 20 I~lvG~~~vGKTsLi~~l~ 38 (182)
T d1moza_ 20 ILILGLDGAGKTTILYRLQ 38 (182)
T ss_dssp EEEEEETTSSHHHHHHHTC
T ss_pred EEEECCCCCCHHHHHHHHh
Confidence 8999999999999998774
No 247
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.27 E-value=0.086 Score=39.36 Aligned_cols=22 Identities=23% Similarity=0.253 Sum_probs=19.9
Q ss_pred EEEeCCCCccHHHHHHHHHHHh
Q 020071 49 LILAGPPGTGKTTSILALAHEL 70 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l 70 (331)
+++.|++|+|||+++..+...-
T Consensus 8 i~vlG~~~vGKTsLi~~~~~~~ 29 (175)
T d2bmja1 8 LGVLGDARSGKSSLIHRFLTGS 29 (175)
T ss_dssp EEEECCTTTTHHHHHHHHHHSC
T ss_pred EEEECCCCCCHHHHHHHHHhCC
Confidence 7999999999999999888754
No 248
>d1gkub1 c.37.1.16 (B:1-250) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=91.26 E-value=0.061 Score=42.34 Aligned_cols=34 Identities=26% Similarity=0.251 Sum_probs=23.1
Q ss_pred HHHHHHHHcCCCCeEEEeCCCCccHHHHHHHHHHHhc
Q 020071 35 ARLGIIARDGNMPNLILAGPPGTGKTTSILALAHELL 71 (331)
Q Consensus 35 ~~l~~~l~~~~~~~~ll~G~~G~GKt~la~~l~~~l~ 71 (331)
..+...+ .|+ ++++.+|+|+|||.++...+....
T Consensus 50 ~~i~~~l-~g~--~~~i~apTGsGKT~~~~~~~~~~~ 83 (237)
T d1gkub1 50 MWAKRIL-RKE--SFAATAPTGVGKTSFGLAMSLFLA 83 (237)
T ss_dssp HHHHHHH-TTC--CEECCCCBTSCSHHHHHHHHHHHH
T ss_pred HHHHHHH-CCC--CEEEEecCCChHHHHHHHHHHHHH
Confidence 3344444 343 589999999999987766655443
No 249
>d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=91.02 E-value=0.2 Score=46.19 Aligned_cols=57 Identities=19% Similarity=0.322 Sum_probs=40.5
Q ss_pred hhhhcCCCCCCccccCHHHHH--HHHHHHHcCCCCeEEEeCCCCccHHHHHHHHHHHhc
Q 020071 15 WVEKYRPTKVCDIVGNLDAVA--RLGIIARDGNMPNLILAGPPGTGKTTSILALAHELL 71 (331)
Q Consensus 15 ~~~~~~p~~~~~~ig~~~~~~--~l~~~l~~~~~~~~ll~G~~G~GKt~la~~l~~~l~ 71 (331)
+...|+-....++--|--.+. ..+.++..+..-.+++.|++|+|||...+.+.+.+.
T Consensus 58 ~~~~y~~~~~~~~~PHif~vA~~Ay~~m~~~~~~Q~IiisGeSGaGKTe~~k~il~yL~ 116 (710)
T d1br2a2 58 IIDMYKGKKRHEMPPHIYAIADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLA 116 (710)
T ss_dssp HHHHTTTCCGGGSCCCHHHHHHHHHHHHHHHTCCEEEEEECSTTSSHHHHHHHHHHHHH
T ss_pred HHHHHcCCCCCCCCChHHHHHHHHHHHHHHhCCCcEEEEEeCCCCCHHHHHHHHHHHHH
Confidence 456666666666655554443 445556666544499999999999999999998873
No 250
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain {Bacillus subtilis [TaxId: 1423]}
Probab=91.01 E-value=0.049 Score=40.95 Aligned_cols=22 Identities=27% Similarity=0.454 Sum_probs=19.1
Q ss_pred CeEEEeCCCCccHHHHHHHHHH
Q 020071 47 PNLILAGPPGTGKTTSILALAH 68 (331)
Q Consensus 47 ~~~ll~G~~G~GKt~la~~l~~ 68 (331)
+.|-|.|++++|||++..++..
T Consensus 2 ~~VaiiG~~nvGKSSLin~L~~ 23 (185)
T d1lnza2 2 ADVGLVGFPSVGKSTLLSVVSS 23 (185)
T ss_dssp CCEEEESSTTSSHHHHHHHSEE
T ss_pred CeEEEECCCCCCHHHHHHHHhC
Confidence 4588999999999999998854
No 251
>d1xbta1 c.37.1.24 (A:18-150) Thymidine kinase, TK1, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.98 E-value=0.23 Score=35.06 Aligned_cols=92 Identities=14% Similarity=0.143 Sum_probs=44.2
Q ss_pred EEeCCCCccHHHHHHHHHHHhcCCCCCCceEEeecCCC-CChHhHHHHHH-HHHhcccCC------CCCCceEEEEeCCC
Q 020071 50 ILAGPPGTGKTTSILALAHELLGPNYREAVMELNASDD-RGIDVVRNKIK-MFAQKKVTL------PPGKHKVVVLDEAD 121 (331)
Q Consensus 50 ll~G~~G~GKt~la~~l~~~l~~~~~~~~~~~~~~~~~-~~~~~i~~~i~-~~~~~~~~~------~~~~~~vviide~d 121 (331)
+++||=.+|||+-....+...... +..++.+++... +....+...-. ......... ...+..+|+|||++
T Consensus 6 li~GpMfsGKTt~Li~~~~~~~~~--g~~v~~ikp~~D~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~I~IDEaQ 83 (133)
T d1xbta1 6 VILGPMFSGKSTELMRRVRRFQIA--QYKCLVIKYAKDTRYSSSFCTHDRNTMEALPACLLRDVAQEALGVAVIGIDEGQ 83 (133)
T ss_dssp EEECCTTSCHHHHHHHHHHHHHTT--TCCEEEEEETTCCC--------------CEEESSGGGGHHHHHTCSEEEESSGG
T ss_pred EEEecccCHHHHHHHHHHHHHHHc--CCcEEEEecccccCCcceeeecCCCcceeeeeechhhhhhhhcccceEEeehhH
Confidence 889999999998555554444322 334555554322 11111000000 000000000 01236799999999
Q ss_pred CCCHHHHHHHHHHHHHhcCCcEEEEe
Q 020071 122 SMTAGAQQALRRTMEIYSNSTRFALA 147 (331)
Q Consensus 122 ~l~~~~~~~Ll~~le~~~~~~~~I~~ 147 (331)
.+. + ...+.+.+.+. +..+++.
T Consensus 84 Ff~-d-l~~~~~~~~~~--~~~Viv~ 105 (133)
T d1xbta1 84 FFP-D-IVEFCEAMANA--GKTVIVA 105 (133)
T ss_dssp GCT-T-HHHHHHHHHHT--TCEEEEE
T ss_pred HHH-H-HHHHHHHHHhc--CCcEEEE
Confidence 996 3 34455666553 3445554
No 252
>d1deka_ c.37.1.1 (A:) Deoxynucleoside monophosphate kinase {Bacteriophage T4 [TaxId: 10665]}
Probab=90.94 E-value=0.067 Score=42.13 Aligned_cols=22 Identities=23% Similarity=0.351 Sum_probs=20.1
Q ss_pred EEEeCCCCccHHHHHHHHHHHh
Q 020071 49 LILAGPPGTGKTTSILALAHEL 70 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l 70 (331)
+-|+|+.|+||||+|+.|++.+
T Consensus 4 IgiTG~igSGKsTva~~l~e~~ 25 (241)
T d1deka_ 4 IFLSGVKRSGKDTTADFIMSNY 25 (241)
T ss_dssp EEEECCTTSSHHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHHhC
Confidence 5799999999999999998865
No 253
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=90.86 E-value=0.062 Score=40.78 Aligned_cols=18 Identities=28% Similarity=0.532 Sum_probs=17.4
Q ss_pred EEEeCCCCccHHHHHHHH
Q 020071 49 LILAGPPGTGKTTSILAL 66 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l 66 (331)
+++.|.+|+|||+++..+
T Consensus 5 ivllG~~~vGKTsll~r~ 22 (200)
T d1zcba2 5 ILLLGAGESGKSTFLKQM 22 (200)
T ss_dssp EEEECSTTSSHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHH
Confidence 799999999999999999
No 254
>d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein TrwB {Escherichia coli [TaxId: 562]}
Probab=90.84 E-value=0.064 Score=46.32 Aligned_cols=37 Identities=24% Similarity=0.359 Sum_probs=27.1
Q ss_pred CeEEEeCCCCccHHHHHHHHHHHhcCCCCCCceEEeecC
Q 020071 47 PNLILAGPPGTGKTTSILALAHELLGPNYREAVMELNAS 85 (331)
Q Consensus 47 ~~~ll~G~~G~GKt~la~~l~~~l~~~~~~~~~~~~~~~ 85 (331)
.|+++.|++|+|||+++..+...+... +..++.+++.
T Consensus 51 ~H~~I~G~tGsGKT~~l~~li~~~~~~--g~~~iiiD~k 87 (433)
T d1e9ra_ 51 RHLLVNGATGTGKSVLLRELAYTGLLR--GDRMVIVDPN 87 (433)
T ss_dssp GCEEEEECTTSSHHHHHHHHHHHHHHT--TCEEEEEEET
T ss_pred ceEEEEeCCCCcHHHHHHHHHHHHHhC--CCCEEEEeCC
Confidence 379999999999999988777665443 3445555543
No 255
>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]}
Probab=90.84 E-value=0.2 Score=46.32 Aligned_cols=57 Identities=26% Similarity=0.337 Sum_probs=40.8
Q ss_pred chhhhcCCCCCCccccCHHHHH--HHHHHHHcCCCCeEEEeCCCCccHHHHHHHHHHHh
Q 020071 14 PWVEKYRPTKVCDIVGNLDAVA--RLGIIARDGNMPNLILAGPPGTGKTTSILALAHEL 70 (331)
Q Consensus 14 ~~~~~~~p~~~~~~ig~~~~~~--~l~~~l~~~~~~~~ll~G~~G~GKt~la~~l~~~l 70 (331)
-+...|+-....++--|--.+. ....++..+..-.+++.|++|+|||..++.+.+.+
T Consensus 60 ~~~~~y~~~~~~~~~PHif~vA~~Ay~~l~~~~~~Q~IiisGeSGsGKTe~~k~il~~l 118 (730)
T d1w7ja2 60 DIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYF 118 (730)
T ss_dssp HHHHHHTTCCGGGSCCCHHHHHHHHHHHHHHHTCCEEEEEECSTTSSHHHHHHHHHHHH
T ss_pred HHHHHHcCCCcCCCCCcHHHHHHHHHHHHHHhCCCeEEEEEeCCCCCHHHHHHHHHHHH
Confidence 4566777666666655544443 45555666654448999999999999999998876
No 256
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli [TaxId: 562]}
Probab=90.74 E-value=0.035 Score=41.61 Aligned_cols=24 Identities=21% Similarity=0.389 Sum_probs=20.1
Q ss_pred CCCeEEEeCCCCccHHHHHHHHHH
Q 020071 45 NMPNLILAGPPGTGKTTSILALAH 68 (331)
Q Consensus 45 ~~~~~ll~G~~G~GKt~la~~l~~ 68 (331)
..+.+.|.|.+++|||++.+++..
T Consensus 15 ~~~~I~lvG~~NvGKSSL~n~L~~ 38 (188)
T d1puia_ 15 TGIEVAFAGRSNAGKSSALNTLTN 38 (188)
T ss_dssp CSEEEEEEECTTSSHHHHHTTTCC
T ss_pred cCCEEEEECCCCCCHHHHHHHHhC
Confidence 345699999999999999988844
No 257
>d1qhla_ c.37.1.12 (A:) Cell division protein MukB {Escherichia coli [TaxId: 562]}
Probab=90.72 E-value=0.037 Score=42.05 Aligned_cols=24 Identities=33% Similarity=0.563 Sum_probs=21.5
Q ss_pred EEEeCCCCccHHHHHHHHHHHhcC
Q 020071 49 LILAGPPGTGKTTSILALAHELLG 72 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l~~ 72 (331)
.+|+||.|+|||++..++.-.+.+
T Consensus 27 tvi~G~NGsGKStil~Ai~~~L~g 50 (222)
T d1qhla_ 27 TTLSGGNGAGKSTTMAAFVTALIP 50 (222)
T ss_dssp HHHHSCCSHHHHHHHHHHHHHHSC
T ss_pred EEEECCCCCCHHHHHHHHHHHhcC
Confidence 389999999999999999988754
No 258
>d1jjva_ c.37.1.1 (A:) Dephospho-CoA kinase {Haemophilus influenzae [TaxId: 727]}
Probab=90.62 E-value=0.063 Score=41.28 Aligned_cols=20 Identities=35% Similarity=0.391 Sum_probs=17.2
Q ss_pred EEEeCCCCccHHHHHHHHHH
Q 020071 49 LILAGPPGTGKTTSILALAH 68 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~ 68 (331)
+-++|+.|+||||+++.+.+
T Consensus 5 IgITG~igSGKStv~~~l~~ 24 (205)
T d1jjva_ 5 VGLTGGIGSGKTTIANLFTD 24 (205)
T ss_dssp EEEECSTTSCHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHHH
Confidence 45899999999999998853
No 259
>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=90.55 E-value=0.21 Score=46.63 Aligned_cols=56 Identities=18% Similarity=0.298 Sum_probs=39.9
Q ss_pred hhhcCCCCCCccccCHHHHH--HHHHHHHcCCCCeEEEeCCCCccHHHHHHHHHHHhc
Q 020071 16 VEKYRPTKVCDIVGNLDAVA--RLGIIARDGNMPNLILAGPPGTGKTTSILALAHELL 71 (331)
Q Consensus 16 ~~~~~p~~~~~~ig~~~~~~--~l~~~l~~~~~~~~ll~G~~G~GKt~la~~l~~~l~ 71 (331)
...|+-....++--|--.+. ....++..+..-.+++.|++|+|||..++.+.+.+.
T Consensus 91 ~~~y~~~~~~~~pPHifaiA~~Ay~~m~~~~~~QsIiisGeSGaGKTe~~K~il~yL~ 148 (794)
T d2mysa2 91 VLAYRGKKRQEAPPHIFSISDNAYQFMLTDRENQSILITGESGAGKTVNTKRVIQYFA 148 (794)
T ss_dssp HHHTTTCCTTSSCSCHHHHHHHHHHHHHHHTCCEEEEEEECTTSCHHHHHHHHHHHHH
T ss_pred HHHHcCCCCCCCCCcHHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHHHHHH
Confidence 35666556666655655553 456666666644499999999999999999988773
No 260
>g1xew.1 c.37.1.12 (X:,Y:) Smc head domain {Pyrococcus furiosus [TaxId: 2261]}
Probab=90.15 E-value=0.075 Score=43.91 Aligned_cols=24 Identities=25% Similarity=0.303 Sum_probs=20.9
Q ss_pred eE-EEeCCCCccHHHHHHHHHHHhc
Q 020071 48 NL-ILAGPPGTGKTTSILALAHELL 71 (331)
Q Consensus 48 ~~-ll~G~~G~GKt~la~~l~~~l~ 71 (331)
++ +|+||.|+|||++..++.-.+.
T Consensus 27 ~lnvi~G~NGsGKS~il~AI~~~L~ 51 (329)
T g1xew.1 27 GFTAIVGANGSGKSNIGDAILFVLG 51 (329)
T ss_dssp SEEEEEECTTSSSHHHHHHHHHHTT
T ss_pred CeEEEECCCCCCHHHHHHHHHHHHC
Confidence 45 9999999999999999987664
No 261
>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}
Probab=90.10 E-value=0.21 Score=46.60 Aligned_cols=57 Identities=25% Similarity=0.325 Sum_probs=40.9
Q ss_pred hhhhcCCCCCCccccCHHHHH--HHHHHHHcCCCCeEEEeCCCCccHHHHHHHHHHHhc
Q 020071 15 WVEKYRPTKVCDIVGNLDAVA--RLGIIARDGNMPNLILAGPPGTGKTTSILALAHELL 71 (331)
Q Consensus 15 ~~~~~~p~~~~~~ig~~~~~~--~l~~~l~~~~~~~~ll~G~~G~GKt~la~~l~~~l~ 71 (331)
..++|+.....++--|--.+. ....+...+..-.+++.|++|+|||..++.+.+.+.
T Consensus 88 ~~~~y~~~~~~~~~PHiyavA~~Ay~~m~~~~~nQ~IiisGESGaGKTe~~K~il~yL~ 146 (789)
T d1kk8a2 88 VIAKYRGKRKTEIPPHLFSVADNAYQNMVTDRENQSCLITGESGAGKTENTKKVIMYLA 146 (789)
T ss_dssp HHHHHTTCCGGGSCCCHHHHHHHHHHHHHHHTSEEEEEEECSTTSSHHHHHHHHHHHHH
T ss_pred HHHHHcCCCCCCCCCcHHHHHHHHHHHHHHhCCCcEEEEEeCCCCCHHHHHHHHHHHHH
Confidence 456777666666655654443 556666666533389999999999999999988774
No 262
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=90.07 E-value=0.086 Score=39.48 Aligned_cols=21 Identities=29% Similarity=0.536 Sum_probs=19.0
Q ss_pred EEEeCCCCccHHHHHHHHHHH
Q 020071 49 LILAGPPGTGKTTSILALAHE 69 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~ 69 (331)
+.|.|.+|+|||+++.++...
T Consensus 11 V~iiG~~~~GKSTLin~l~~~ 31 (186)
T d1mkya2 11 VAIVGRPNVGKSTLFNAILNK 31 (186)
T ss_dssp EEEECSTTSSHHHHHHHHHTS
T ss_pred EEEECCCCCCHHHHHHHHHCC
Confidence 799999999999999998753
No 263
>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}
Probab=89.86 E-value=0.12 Score=41.27 Aligned_cols=36 Identities=22% Similarity=0.266 Sum_probs=28.7
Q ss_pred EEEeCCCCccHHHHHHHHHHHhcCCCCCCceEEeec
Q 020071 49 LILAGPPGTGKTTSILALAHELLGPNYREAVMELNA 84 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l~~~~~~~~~~~~~~ 84 (331)
+.|+|.-|+||||++-.++..+...+...-++.++.
T Consensus 4 Iai~gKGGvGKTT~a~nLA~~LA~~G~rVllID~D~ 39 (269)
T d1cp2a_ 4 VAIYGKGGIGKSTTTQNLTSGLHAMGKTIMVVGCDP 39 (269)
T ss_dssp EEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEEECT
T ss_pred EEEECCCcCCHHHHHHHHHHHHHhCCCcEEEEecCC
Confidence 567999999999999999999987765555555553
No 264
>d1nija1 c.37.1.10 (A:2-223) Hypothetical protein YjiA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=89.83 E-value=0.058 Score=42.18 Aligned_cols=25 Identities=32% Similarity=0.424 Sum_probs=21.4
Q ss_pred CCeEEEeCCCCccHHHHHHHHHHHh
Q 020071 46 MPNLILAGPPGTGKTTSILALAHEL 70 (331)
Q Consensus 46 ~~~~ll~G~~G~GKt~la~~l~~~l 70 (331)
+|-.+++|.-|+||||+.+.+.+..
T Consensus 3 iPv~iitGFLGaGKTTll~~lL~~~ 27 (222)
T d1nija1 3 IAVTLLTGFLGAGKTTLLRHILNEQ 27 (222)
T ss_dssp EEEEEEEESSSSSCHHHHHHHHHSC
T ss_pred CCEEEEeeCCCCCHHHHHHHHHhcC
Confidence 4546999999999999999998863
No 265
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=89.75 E-value=0.11 Score=42.71 Aligned_cols=23 Identities=26% Similarity=0.437 Sum_probs=19.8
Q ss_pred EEEeCCCCccHHHHHHHHHHHhc
Q 020071 49 LILAGPPGTGKTTSILALAHELL 71 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l~ 71 (331)
.+|+|+.|+|||++..++.-.+.
T Consensus 26 ~vi~G~NgsGKTtileAI~~~l~ 48 (369)
T g1ii8.1 26 NLIIGQNGSGKSSLLDAILVGLY 48 (369)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHHc
Confidence 48999999999999999876553
No 266
>d2jdia3 c.37.1.11 (A:95-379) Central domain of alpha subunit of F1 ATP synthase {Cow (Bos taurus) [TaxId: 9913]}
Probab=89.74 E-value=1.3 Score=35.46 Aligned_cols=93 Identities=14% Similarity=0.097 Sum_probs=49.5
Q ss_pred EEEeCCCCccHHHHHHHHHHHhc----CCCCCCc-eEEeecCCCCChHhHHHHHHHHHhcccCCCCCCceEEEEeCCCCC
Q 020071 49 LILAGPPGTGKTTSILALAHELL----GPNYREA-VMELNASDDRGIDVVRNKIKMFAQKKVTLPPGKHKVVVLDEADSM 123 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l~----~~~~~~~-~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~vviide~d~l 123 (331)
+++.|++|+|||+++..++.... +...... ++.+-.-.. ...+..+.++...... .-++.++|.--++.-
T Consensus 71 ~~If~~~g~GKt~ll~~~~~~~~~~~~~~~~~~~~~~v~~~IGe-r~~E~~e~~~~~~~~~----~~~~tvvv~~ts~~~ 145 (285)
T d2jdia3 71 ELIIGDRQTGKTSIAIDTIINQKRFNDGTDEKKKLYCIYVAIGQ-KRSTVAQLVKRLTDAD----AMKYTIVVSATASDA 145 (285)
T ss_dssp CEEEESTTSSHHHHHHHHHHHTHHHHTSSCTTTCCEEEEEEESC-CHHHHHHHHHHHHHTT----CGGGEEEEEECTTSC
T ss_pred EEeecCCCCChHHHHHHHHHhHHhhccccccccceEEEEeeeCc-cHHHHHHHHHHhcccc----cccceEEEEECCCCC
Confidence 78999999999999887775432 1111111 222222222 2345556666555443 124567777666553
Q ss_pred CH------HHHHHHHHHHHHhcCCcEEEE
Q 020071 124 TA------GAQQALRRTMEIYSNSTRFAL 146 (331)
Q Consensus 124 ~~------~~~~~Ll~~le~~~~~~~~I~ 146 (331)
.. ...-++-+++.+...++.+++
T Consensus 146 ~~~r~~~~~~a~tiAEyfrd~G~~VLll~ 174 (285)
T d2jdia3 146 APLQYLAPYSGCSMGEYFRDNGKHALIIY 174 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCcEEEEE
Confidence 32 123345566666555555544
No 267
>d1p6xa_ c.37.1.1 (A:) Thymidine kinase {Equine herpesvirus type 4 [TaxId: 10331]}
Probab=89.73 E-value=0.077 Score=44.12 Aligned_cols=24 Identities=33% Similarity=0.425 Sum_probs=21.9
Q ss_pred EEEeCCCCccHHHHHHHHHHHhcC
Q 020071 49 LILAGPPGTGKTTSILALAHELLG 72 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l~~ 72 (331)
+.|-|+-|+||||+++.+++.+..
T Consensus 9 I~iEG~iGsGKSTl~~~L~~~l~~ 32 (333)
T d1p6xa_ 9 IYLDGVYGIGKSTTGRVMASAASG 32 (333)
T ss_dssp EEEECSTTSSHHHHHHHHHSGGGC
T ss_pred EEEECCccCCHHHHHHHHHHHhcc
Confidence 689999999999999999998853
No 268
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=89.60 E-value=0.086 Score=39.82 Aligned_cols=23 Identities=30% Similarity=0.278 Sum_probs=20.4
Q ss_pred EEEeCCCCccHHHHHHHHHHHhc
Q 020071 49 LILAGPPGTGKTTSILALAHELL 71 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l~ 71 (331)
+++.|..|+|||+++..+...-.
T Consensus 5 iv~lG~~~vGKTsll~r~~~~~~ 27 (200)
T d2bcjq2 5 LLLLGTGESGKSTFIKQMRIIHG 27 (200)
T ss_dssp EEEEESTTSSHHHHHHHHHHHTS
T ss_pred EEEECCCCCCHHHHHHHHhCCCC
Confidence 79999999999999999977643
No 269
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga maritima [TaxId: 2336]}
Probab=89.59 E-value=0.036 Score=40.58 Aligned_cols=22 Identities=32% Similarity=0.566 Sum_probs=19.9
Q ss_pred EEEeCCCCccHHHHHHHHHHHh
Q 020071 49 LILAGPPGTGKTTSILALAHEL 70 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l 70 (331)
+.|.|.+|+|||+++.++...-
T Consensus 3 I~liG~~n~GKSSLin~l~g~~ 24 (160)
T d1xzpa2 3 MVIVGKPNVGKSTLLNRLLNED 24 (160)
T ss_dssp EEEECCHHHHTCHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHhCCC
Confidence 7899999999999999998753
No 270
>d1xpua3 c.37.1.11 (A:129-417) Transcription termination factor Rho, ATPase domain {Escherichia coli [TaxId: 562]}
Probab=89.18 E-value=0.63 Score=37.40 Aligned_cols=24 Identities=25% Similarity=0.494 Sum_probs=21.3
Q ss_pred eEEEeCCCCccHHHHHHHHHHHhc
Q 020071 48 NLILAGPPGTGKTTSILALAHELL 71 (331)
Q Consensus 48 ~~ll~G~~G~GKt~la~~l~~~l~ 71 (331)
..++.|++|+|||+++..+++...
T Consensus 45 r~~I~g~~g~GKT~l~~~i~~~~~ 68 (289)
T d1xpua3 45 RGLIVAPPKAGKTMLLQNIAQSIA 68 (289)
T ss_dssp EEEEEECSSSSHHHHHHHHHHHHH
T ss_pred eeeEeCCCCCCHHHHHHHHHHHHh
Confidence 489999999999999999998663
No 271
>d1t9ha2 c.37.1.8 (A:68-298) Probable GTPase EngC (YjeQ), C-terminal domain {Bacillus subtilis [TaxId: 1423]}
Probab=89.15 E-value=0.04 Score=43.25 Aligned_cols=22 Identities=36% Similarity=0.650 Sum_probs=18.1
Q ss_pred EEEeCCCCccHHHHHHHHHHHh
Q 020071 49 LILAGPPGTGKTTSILALAHEL 70 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l 70 (331)
.+|.|++|+||||++.++....
T Consensus 100 ~vl~G~SGVGKSSLiN~L~~~~ 121 (231)
T d1t9ha2 100 TVFAGQSGVGKSSLLNAISPEL 121 (231)
T ss_dssp EEEEESHHHHHHHHHHHHCC--
T ss_pred EEEECCCCccHHHHHHhhccHh
Confidence 5899999999999999887543
No 272
>d1t5la1 c.37.1.19 (A:2-414) Nucleotide excision repair enzyme UvrB {Bacillus caldotenax [TaxId: 1395]}
Probab=89.08 E-value=0.3 Score=41.66 Aligned_cols=65 Identities=23% Similarity=0.291 Sum_probs=48.1
Q ss_pred cCHHHHHHHHHHHHcCCCCeEEEeCCCCccHHHHHHHHHHHhcCCCCCCceEEeecCCCCChHhHHHHHHHH
Q 020071 29 GNLDAVARLGIIARDGNMPNLILAGPPGTGKTTSILALAHELLGPNYREAVMELNASDDRGIDVVRNKIKMF 100 (331)
Q Consensus 29 g~~~~~~~l~~~l~~~~~~~~ll~G~~G~GKt~la~~l~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~ 100 (331)
.|+.+++.|.+.+.+|. .+.++.|-+|+|||.++..+.+.. +.+.+.+.+... ...++.+.+..+
T Consensus 15 DQP~aI~~l~~~l~~g~-~~q~l~GltGS~ka~~iA~l~~~~-----~rp~LVVt~n~~-~A~qL~~dL~~~ 79 (413)
T d1t5la1 15 DQPQAIAKLVDGLRRGV-KHQTLLGATGTGKTFTISNVIAQV-----NKPTLVIAHNKT-LAGQLYSELKEF 79 (413)
T ss_dssp THHHHHHHHHHHHHHTC-SEEEEEECTTSCHHHHHHHHHHHH-----TCCEEEECSSHH-HHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhcCC-CcEEEeCCCCcHHHHHHHHHHHHh-----CCCEEEEeCCHH-HHHHHHHHHHHH
Confidence 47888999999998876 357899999999999999999988 566777765543 233444444443
No 273
>d2jdid3 c.37.1.11 (D:82-357) Central domain of beta subunit of F1 ATP synthase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=89.01 E-value=2 Score=34.14 Aligned_cols=96 Identities=11% Similarity=0.085 Sum_probs=48.9
Q ss_pred eEEEeCCCCccHHHHHHHHHHHhcCCCCCCceEEeecCCCCChHhHHHHHHHHHhcccC-CCC-CCceEEEEeCCCCCCH
Q 020071 48 NLILAGPPGTGKTTSILALAHELLGPNYREAVMELNASDDRGIDVVRNKIKMFAQKKVT-LPP-GKHKVVVLDEADSMTA 125 (331)
Q Consensus 48 ~~ll~G~~G~GKt~la~~l~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~-~~~-~~~~vviide~d~l~~ 125 (331)
.+++.|++|+|||+++..+++.....+... ++..... . ...+..+.++.+...... ... -.+.++|.--.+.-..
T Consensus 70 r~~If~~~g~GKt~l~~~i~~~~~~~~~~v-~V~~~iG-e-r~~ev~~~~~~~~~~~~~~~~~~~~~tvvv~~~s~~~~~ 146 (276)
T d2jdid3 70 KIGLFGGAGVGKTVLIMELINNVAKAHGGY-SVFAGVG-E-RTREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPG 146 (276)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHHTTTCSSE-EEEEEES-C-CHHHHHHHHHHHHHHTSSCSSSSCCCEEEEEECTTSCHH
T ss_pred EEEeeCCCCCCHHHHHHHHHHHHHhhCCCe-EEEEEec-c-ChHHHHHHHHHHHhcCccccccccceEEEEEECCCCCHH
Confidence 389999999999999999988753222111 2222222 2 223455555555543210 011 2355666654544322
Q ss_pred ------HHHHHHHHHHH-HhcCCcEEEE
Q 020071 126 ------GAQQALRRTME-IYSNSTRFAL 146 (331)
Q Consensus 126 ------~~~~~Ll~~le-~~~~~~~~I~ 146 (331)
...-++-+++. +...++.+++
T Consensus 147 ~r~~~~~~a~~iAEyf~~~~G~~VLv~~ 174 (276)
T d2jdid3 147 ARARVALTGLTVAEYFRDQEGQDVLLFI 174 (276)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCSCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 12223445554 3344554444
No 274
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=88.86 E-value=0.13 Score=38.59 Aligned_cols=22 Identities=27% Similarity=0.365 Sum_probs=19.6
Q ss_pred EEEeCCCCccHHHHHHHHHHHh
Q 020071 49 LILAGPPGTGKTTSILALAHEL 70 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l 70 (331)
+++.|..|+|||++++.+...-
T Consensus 5 ivllG~~~vGKTsl~~r~~~~~ 26 (195)
T d1svsa1 5 LLLLGAGESGKSTIVKQMKIIH 26 (195)
T ss_dssp EEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHhhCC
Confidence 7999999999999999987653
No 275
>d1osna_ c.37.1.1 (A:) Thymidine kinase {Varicella-zoster virus [TaxId: 10335]}
Probab=88.44 E-value=0.077 Score=44.10 Aligned_cols=24 Identities=33% Similarity=0.437 Sum_probs=21.9
Q ss_pred EEEeCCCCccHHHHHHHHHHHhcC
Q 020071 49 LILAGPPGTGKTTSILALAHELLG 72 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l~~ 72 (331)
+.|-|+-|+||||+++.+++.+..
T Consensus 8 I~IEG~iGsGKSTl~~~L~~~l~~ 31 (331)
T d1osna_ 8 IYLDGAYGIGKTTAAEEFLHHFAI 31 (331)
T ss_dssp EEEEESSSSCTTHHHHHHHHTTTT
T ss_pred EEEECCCCCCHHHHHHHHHHHHhh
Confidence 689999999999999999998854
No 276
>d1d2ea3 c.37.1.8 (A:55-250) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Cow (Bos taurus), mitochondrial [TaxId: 9913]}
Probab=87.73 E-value=3.6 Score=30.64 Aligned_cols=22 Identities=32% Similarity=0.264 Sum_probs=19.5
Q ss_pred EEEeCCCCccHHHHHHHHHHHh
Q 020071 49 LILAGPPGTGKTTSILALAHEL 70 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l 70 (331)
+.+.|-.+.||||++.++...+
T Consensus 6 i~iiGHvd~GKSTL~~~l~~~~ 27 (196)
T d1d2ea3 6 VGTIGHVDHGKTTLTAAITKIL 27 (196)
T ss_dssp EEEESSTTSSHHHHHHHHHHHH
T ss_pred EEEEeCCCCcHHHHHHHHHHHH
Confidence 7999999999999999997643
No 277
>d2dy1a2 c.37.1.8 (A:8-274) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus, EF-G-2 [TaxId: 274]}
Probab=87.58 E-value=2.1 Score=33.84 Aligned_cols=23 Identities=39% Similarity=0.460 Sum_probs=19.8
Q ss_pred eEEEeCCCCccHHHHHHHHHHHh
Q 020071 48 NLILAGPPGTGKTTSILALAHEL 70 (331)
Q Consensus 48 ~~ll~G~~G~GKt~la~~l~~~l 70 (331)
++.+.|..|.||||++.++....
T Consensus 4 Nv~iiGh~~~GKTtL~e~ll~~~ 26 (267)
T d2dy1a2 4 TVALVGHAGSGKTTLTEALLYKT 26 (267)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHT
T ss_pred EEEEEcCCCCcHHHHHHHHHHHc
Confidence 58889999999999999996543
No 278
>d1wb1a4 c.37.1.8 (A:1-179) Elongation factor SelB, N-terminal domain {Methanococcus maripaludis [TaxId: 39152]}
Probab=87.51 E-value=2.7 Score=30.62 Aligned_cols=20 Identities=35% Similarity=0.278 Sum_probs=18.5
Q ss_pred EEEeCCCCccHHHHHHHHHH
Q 020071 49 LILAGPPGTGKTTSILALAH 68 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~ 68 (331)
+-+.|.+++||||+..++.+
T Consensus 8 IaiiG~~naGKSTL~n~L~~ 27 (179)
T d1wb1a4 8 LGIFGHIDHGKTTLSKVLTE 27 (179)
T ss_dssp EEEEECTTSSHHHHHHHHHT
T ss_pred EEEEeCCCCcHHHHHHHHHH
Confidence 78999999999999999975
No 279
>d2afhe1 c.37.1.10 (E:1-289) Nitrogenase iron protein {Azotobacter vinelandii [TaxId: 354]}
Probab=87.30 E-value=0.18 Score=40.79 Aligned_cols=36 Identities=19% Similarity=0.258 Sum_probs=27.3
Q ss_pred EEEeCCCCccHHHHHHHHHHHhcCCCCCCceEEeec
Q 020071 49 LILAGPPGTGKTTSILALAHELLGPNYREAVMELNA 84 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l~~~~~~~~~~~~~~ 84 (331)
+.++|.-|+||||++-.++..+...+...-++.+++
T Consensus 5 IaisgKGGVGKTT~a~NLA~~LA~~G~rVLlID~Dp 40 (289)
T d2afhe1 5 CAIYGKGGIGKSTTTQNLVAALAEMGKKVMIVGCDP 40 (289)
T ss_dssp EEEEECTTSSHHHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEecCC
Confidence 567999999999999999998876655444455543
No 280
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId: 2336]}
Probab=87.20 E-value=0.11 Score=42.38 Aligned_cols=22 Identities=32% Similarity=0.551 Sum_probs=19.1
Q ss_pred EEEeCCCCccHHHHHHHHHHHh
Q 020071 49 LILAGPPGTGKTTSILALAHEL 70 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l 70 (331)
-+|+||.|+|||++..++.-.+
T Consensus 27 nvlvG~NgsGKS~iL~Ai~~~l 48 (308)
T d1e69a_ 27 TAIVGPNGSGKSNIIDAIKWVF 48 (308)
T ss_dssp EEEECCTTTCSTHHHHHHHHTS
T ss_pred EEEECCCCCcHHHHHHHHHHHh
Confidence 3999999999999999986644
No 281
>d1g8fa3 c.37.1.15 (A:390-511) ATP sulfurylase C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=87.08 E-value=0.51 Score=32.48 Aligned_cols=36 Identities=11% Similarity=0.061 Sum_probs=27.1
Q ss_pred EEEeCCCCccHHHHHHHHHHHhcCCCCCCceEEeec
Q 020071 49 LILAGPPGTGKTTSILALAHELLGPNYREAVMELNA 84 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l~~~~~~~~~~~~~~ 84 (331)
++|.|-.|+||+++|+++...++.-..+.++--+++
T Consensus 9 i~~tg~~~~gk~~ia~al~~~l~q~~G~R~vtll~~ 44 (122)
T d1g8fa3 9 IVLGNSLTVSREQLSIALLSTFLQFGGGRYYKIFEH 44 (122)
T ss_dssp EEECTTCCSCHHHHHHHHHHHHTTSCSCCCEEECCC
T ss_pred EEEeCCCCCCHHHHHHHHHHHHHHhcCCcceEEecC
Confidence 799999999999999999998875322334444443
No 282
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=87.06 E-value=0.18 Score=42.86 Aligned_cols=23 Identities=35% Similarity=0.647 Sum_probs=20.1
Q ss_pred eE-EEeCCCCccHHHHHHHHHHHh
Q 020071 48 NL-ILAGPPGTGKTTSILALAHEL 70 (331)
Q Consensus 48 ~~-ll~G~~G~GKt~la~~l~~~l 70 (331)
++ +|+||.|+|||++..++.-.+
T Consensus 26 ~l~~i~G~NGsGKS~ileAi~~~l 49 (427)
T d1w1wa_ 26 NFTSIIGPNGSGKSNMMDAISFVL 49 (427)
T ss_dssp SEEEEECSTTSSHHHHHHHHHHHT
T ss_pred CEEEEECCCCCCHHHHHHHHHHHh
Confidence 45 999999999999999997654
No 283
>d1fx0a3 c.37.1.11 (A:97-372) Central domain of alpha subunit of F1 ATP synthase {Spinach (Spinacia oleracea), chloroplast [TaxId: 3562]}
Probab=86.80 E-value=0.9 Score=36.26 Aligned_cols=90 Identities=18% Similarity=0.148 Sum_probs=46.8
Q ss_pred EEEeCCCCccHHHHHHHHHHHhcCCCCCCceEEeecCCCCChHhHHHHHHHHHhcccCCCCCCceEEEEeCCCCCC----
Q 020071 49 LILAGPPGTGKTTSILALAHELLGPNYREAVMELNASDDRGIDVVRNKIKMFAQKKVTLPPGKHKVVVLDEADSMT---- 124 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~vviide~d~l~---- 124 (331)
+++.|++|+|||+++..+......+ ...++...... ...+..+.++....... -++.++|.--.|.-.
T Consensus 70 ~~Ifg~~g~GKt~l~~~~~~~~~~~--~~v~V~~~iGe--r~~Ev~e~~~~~~~~~~----~~~tvvv~~tsd~p~~~r~ 141 (276)
T d1fx0a3 70 ELIIGDRQTGKTAVATDTILNQQGQ--NVICVYVAIGQ--KASSVAQVVTNFQERGA----MEYTIVVAETADSPATLQY 141 (276)
T ss_dssp CBEEESSSSSHHHHHHHHHHTCCTT--TCEEEEEEESC--CHHHHHHHHHHTGGGTG----GGSEEEEEECTTSCGGGTT
T ss_pred EeeccCCCCChHHHHHHHHhhhccc--Cceeeeeeecc--hhHHHHHHHHhhccCCc----ceeeeecccccCccHHHHH
Confidence 7889999999999998766544322 22222222221 22345555555544331 234455554443321
Q ss_pred --HHHHHHHHHHHHHhcCCcEEEE
Q 020071 125 --AGAQQALRRTMEIYSNSTRFAL 146 (331)
Q Consensus 125 --~~~~~~Ll~~le~~~~~~~~I~ 146 (331)
....-++-+++.+-..++.+++
T Consensus 142 ~a~~~a~tiAEyfrd~G~~Vlll~ 165 (276)
T d1fx0a3 142 LAPYTGAALAEYFMYRERHTLIIY 165 (276)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHHHHcCCceeEEe
Confidence 2334455566666555555444
No 284
>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}
Probab=86.53 E-value=0.17 Score=38.81 Aligned_cols=30 Identities=27% Similarity=0.407 Sum_probs=25.1
Q ss_pred eEEEeCC-CCccHHHHHHHHHHHhcCCCCCC
Q 020071 48 NLILAGP-PGTGKTTSILALAHELLGPNYRE 77 (331)
Q Consensus 48 ~~ll~G~-~G~GKt~la~~l~~~l~~~~~~~ 77 (331)
.++++|- +|+|||+++-.++..+...+...
T Consensus 3 ~~~i~gt~~GVGKTtvs~~La~aLa~~G~rV 33 (224)
T d1byia_ 3 RYFVTGTDTEVGKTVASCALLQAAKAAGYRT 33 (224)
T ss_dssp EEEEEESSTTSCHHHHHHHHHHHHHHTTCCE
T ss_pred eEEEEECCCCccHHHHHHHHHHHHHHCCCeE
Confidence 4789999 59999999999999997765543
No 285
>d2bv3a2 c.37.1.8 (A:7-282) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}
Probab=86.37 E-value=1.9 Score=34.32 Aligned_cols=24 Identities=25% Similarity=0.163 Sum_probs=20.9
Q ss_pred CeEEEeCCCCccHHHHHHHHHHHh
Q 020071 47 PNLILAGPPGTGKTTSILALAHEL 70 (331)
Q Consensus 47 ~~~ll~G~~G~GKt~la~~l~~~l 70 (331)
.++-+.|..|+|||+++.++....
T Consensus 7 Rni~i~gh~~~GKTtL~e~ll~~~ 30 (276)
T d2bv3a2 7 RNIGIAAHIDAGKTTTTERILYYT 30 (276)
T ss_dssp EEEEEEECTTSCHHHHHHHHHHHH
T ss_pred eEEEEEeCCCCCHHHHHHHHHHhc
Confidence 368999999999999999997654
No 286
>d1z3ix2 c.37.1.19 (X:92-389) Rad54-like, Rad54L {Zebra fish (Danio rerio) [TaxId: 7955]}
Probab=85.70 E-value=1.5 Score=35.16 Aligned_cols=41 Identities=12% Similarity=0.159 Sum_probs=24.0
Q ss_pred CceEEEEeCCCCCCHHHHHHHHHHHHHhcCCcEEEEeeCCCC
Q 020071 111 KHKVVVLDEADSMTAGAQQALRRTMEIYSNSTRFALACNVSS 152 (331)
Q Consensus 111 ~~~vviide~d~l~~~~~~~Ll~~le~~~~~~~~I~~~~~~~ 152 (331)
+..+||+||+|.+..... ...+.+.......+++++++...
T Consensus 192 ~~~~vI~DEaH~ikn~~s-~~~~a~~~l~~~~rllLTGTPi~ 232 (298)
T d1z3ix2 192 KVGLVICDEGHRLKNSDN-QTYLALNSMNAQRRVLISGTPIQ 232 (298)
T ss_dssp CCCEEEETTGGGCCTTCH-HHHHHHHHHCCSEEEEECSSCSG
T ss_pred ceeeeecccccccccccc-hhhhhhhccccceeeeecchHHh
Confidence 456999999999853211 11122222345667888876543
No 287
>d1g7sa4 c.37.1.8 (A:1-227) Initiation factor IF2/eIF5b, N-terminal (G) domain {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=85.45 E-value=1.3 Score=34.03 Aligned_cols=24 Identities=25% Similarity=0.271 Sum_probs=20.7
Q ss_pred CeEEEeCCCCccHHHHHHHHHHHh
Q 020071 47 PNLILAGPPGTGKTTSILALAHEL 70 (331)
Q Consensus 47 ~~~ll~G~~G~GKt~la~~l~~~l 70 (331)
|-+-+.|.+++|||||+.++....
T Consensus 6 p~IaIiGh~d~GKSTL~~~L~~~~ 29 (227)
T d1g7sa4 6 PIVSVLGHVDHGKTTLLDHIRGSA 29 (227)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CEEEEEeCCCccHHHHHHHHHhhc
Confidence 447899999999999999997754
No 288
>d1c4oa1 c.37.1.19 (A:2-409) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]}
Probab=84.71 E-value=0.83 Score=38.80 Aligned_cols=64 Identities=23% Similarity=0.289 Sum_probs=46.5
Q ss_pred CHHHHHHHHHHHHcCCCCeEEEeCCCCccHHHHHHHHHHHhcCCCCCCceEEeecCCCCChHhHHHHHHHH
Q 020071 30 NLDAVARLGIIARDGNMPNLILAGPPGTGKTTSILALAHELLGPNYREAVMELNASDDRGIDVVRNKIKMF 100 (331)
Q Consensus 30 ~~~~~~~l~~~l~~~~~~~~ll~G~~G~GKt~la~~l~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~ 100 (331)
|+++++.|.+.+..|.. .+.+.|.+|++|+.++-.+.+.. +.+++.+..... ....+.+.+..+
T Consensus 13 qp~aI~~l~~~L~~g~~-~~~L~GlsgS~ka~~~A~l~~~~-----~rp~LvVt~~~~-~A~~l~~dL~~~ 76 (408)
T d1c4oa1 13 QPKAIAGLVEALRDGER-FVTLLGATGTGKTVTMAKVIEAL-----GRPALVLAPNKI-LAAQLAAEFREL 76 (408)
T ss_dssp HHHHHHHHHHHHHTTCS-EEEEEECTTSCHHHHHHHHHHHH-----TCCEEEEESSHH-HHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhcCCC-cEEEecCCCCHHHHHHHHHHHHh-----CCCEEEEeCCHH-HHHHHHHHHHHh
Confidence 56789999999998763 37999999999999999999988 556666654432 333444444443
No 289
>d1a5ta1 a.80.1.1 (A:208-330) delta prime subunit {Escherichia coli [TaxId: 562]}
Probab=84.30 E-value=2.3 Score=29.16 Aligned_cols=51 Identities=8% Similarity=0.163 Sum_probs=42.1
Q ss_pred HHHHHHHHhcccChHhHHHHHHHHHHHHHHHhc--CCCchHHHHHHHHHHHHHHh
Q 020071 274 TTLFRIIKNYEMAEHLKLEFMKEAGFAHMRICD--GVGSYLQLCGLLAKLSIVRE 326 (331)
Q Consensus 274 ~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~--~~~~~l~l~~l~~~l~~~~~ 326 (331)
..+..++.. ++.....+.++.+..+.+++.+ |+|..+.|+..++++-+.++
T Consensus 65 ~li~~la~~--~s~~~L~~~~~~~~~~r~~L~~~~~lN~ELlL~~~Ll~we~~l~ 117 (123)
T d1a5ta1 65 GLVAELANH--LSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQ 117 (123)
T ss_dssp HHHHHHHHH--SCHHHHHHHHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHhCCCcCHHHHHHHHHHHHHHhcC
Confidence 334444555 6788899999999999999996 99999999999999976654
No 290
>d2c78a3 c.37.1.8 (A:9-212) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}
Probab=83.73 E-value=6.9 Score=29.13 Aligned_cols=21 Identities=33% Similarity=0.200 Sum_probs=18.8
Q ss_pred EEEeCCCCccHHHHHHHHHHH
Q 020071 49 LILAGPPGTGKTTSILALAHE 69 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~ 69 (331)
+.+.|..+.||||++.++...
T Consensus 6 i~iiGhvd~GKSTL~~~Ll~~ 26 (204)
T d2c78a3 6 VGTIGHVDHGKTTLTAALTYV 26 (204)
T ss_dssp EEEECSTTSSHHHHHHHHHHH
T ss_pred EEEEeCCCCcHHHHHHHHHHH
Confidence 789999999999999999654
No 291
>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=83.45 E-value=0.41 Score=36.86 Aligned_cols=27 Identities=33% Similarity=0.338 Sum_probs=21.7
Q ss_pred EEeCCCCccHHHHHHHHHHHhcCCCCC
Q 020071 50 ILAGPPGTGKTTSILALAHELLGPNYR 76 (331)
Q Consensus 50 ll~G~~G~GKt~la~~l~~~l~~~~~~ 76 (331)
+..|..|+|||+++..++..+...+..
T Consensus 6 v~s~KGGvGKTtia~nlA~~la~~g~~ 32 (232)
T d1hyqa_ 6 VASGKGGTGKTTITANLGVALAQLGHD 32 (232)
T ss_dssp EEESSSCSCHHHHHHHHHHHHHHTTCC
T ss_pred EECCCCCChHHHHHHHHHHHHHhCCCC
Confidence 556889999999999999998755433
No 292
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId: 2336]}
Probab=82.68 E-value=1.1 Score=35.99 Aligned_cols=43 Identities=21% Similarity=0.275 Sum_probs=36.4
Q ss_pred CCceEEEEeCCC-CCCHHHHHHHHHHHHHhcCCcEEEEeeCCCC
Q 020071 110 GKHKVVVLDEAD-SMTAGAQQALRRTMEIYSNSTRFALACNVSS 152 (331)
Q Consensus 110 ~~~~vviide~d-~l~~~~~~~Ll~~le~~~~~~~~I~~~~~~~ 152 (331)
....+++|||++ .+++..+..|.+++++...++.+|++|.++.
T Consensus 240 ~~~~~~~iDEpe~~Lhp~~~~~l~~~l~~~~~~~QviitTHsp~ 283 (308)
T d1e69a_ 240 KPSPFYVLDEVDSPLDDYNAERFKRLLKENSKHTQFIVITHNKI 283 (308)
T ss_dssp SCCSEEEEESCCSSCCHHHHHHHHHHHHHHTTTSEEEEECCCTT
T ss_pred ccCchhhhhhccccCCHHHHHHHHHHHHHhccCCEEEEEECCHH
Confidence 456799999998 4689999999999998888899999887654
No 293
>d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]}
Probab=80.29 E-value=0.77 Score=37.62 Aligned_cols=42 Identities=12% Similarity=0.077 Sum_probs=26.8
Q ss_pred CCCcccc----CHHHHHHH----HHHHHcCCCCeEEEeCCCCccHHHHHH
Q 020071 23 KVCDIVG----NLDAVARL----GIIARDGNMPNLILAGPPGTGKTTSIL 64 (331)
Q Consensus 23 ~~~~~ig----~~~~~~~l----~~~l~~~~~~~~ll~G~~G~GKt~la~ 64 (331)
.|+.+.+ |+++.+.+ ...+-.|.-..++-||+.|+|||+...
T Consensus 45 ~FD~vf~~~~~q~~vf~~~~~~lv~~~l~G~n~~i~aYGqtgSGKTyT~~ 94 (323)
T d1bg2a_ 45 AFDRVFQSSTSQEQVYNDCAKKIVKDVLEGYNGTIFAYGQTSSGKTHTME 94 (323)
T ss_dssp ECSEEECTTCCHHHHHHHHTHHHHHHHHTTCCEEEEEECSTTSSHHHHHT
T ss_pred ECCEEECCCCCHHHHHHHHHHHHHHHHHcCCCcceeeecccCCCCceecc
Confidence 4555544 55655532 333335654448999999999998763
No 294
>d1n0ua2 c.37.1.8 (A:3-343) Elongation factor 2 (eEF-2), N-terminal (G) domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=80.09 E-value=5.8 Score=32.35 Aligned_cols=35 Identities=17% Similarity=0.222 Sum_probs=25.5
Q ss_pred HHHHHHHc-CCCCeEEEeCCCCccHHHHHHHHHHHh
Q 020071 36 RLGIIARD-GNMPNLILAGPPGTGKTTSILALAHEL 70 (331)
Q Consensus 36 ~l~~~l~~-~~~~~~ll~G~~G~GKt~la~~l~~~l 70 (331)
.+..+..+ ..+.++.+.|..|.|||+++..+....
T Consensus 6 ~~~~lm~~~~~IRNI~iiGhvd~GKTTL~d~Ll~~~ 41 (341)
T d1n0ua2 6 QMRSLMDKVTNVRNMSVIAHVDHGKSTLTDSLVQRA 41 (341)
T ss_dssp HHHHHHHCGGGEEEEEEECCGGGTHHHHHHHHHHHH
T ss_pred HHHHHhcCcccCcEEEEEeCCCCcHHHHHHHHHHHC
Confidence 33444443 334469999999999999999997654
No 295
>d1j3ba1 c.91.1.1 (A:212-529) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Thermus thermophilus [TaxId: 274]}
Probab=79.52 E-value=0.31 Score=39.79 Aligned_cols=23 Identities=9% Similarity=0.021 Sum_probs=17.4
Q ss_pred eeecCCCHHHHHHHHHHHHHhcC
Q 020071 165 VRFSRLSDEEILSRLMVVVQEEK 187 (331)
Q Consensus 165 i~~~~~~~~~~~~~l~~~~~~~~ 187 (331)
-.|-|+.+.+-.++|.++.++.+
T Consensus 185 ~PFl~~~p~~ya~lL~~ki~~~~ 207 (318)
T d1j3ba1 185 APFLPMHPGVYARMLGEKIRKHA 207 (318)
T ss_dssp GGGCSSCHHHHHHHHHHHHHHHC
T ss_pred ccccccChhhHHHHHHHHHHhcC
Confidence 46778888888888888777654
No 296
>d2olra1 c.91.1.1 (A:228-540) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Escherichia coli [TaxId: 562]}
Probab=78.25 E-value=0.45 Score=38.62 Aligned_cols=23 Identities=17% Similarity=0.151 Sum_probs=18.8
Q ss_pred eeecCCCHHHHHHHHHHHHHhcC
Q 020071 165 VRFSRLSDEEILSRLMVVVQEEK 187 (331)
Q Consensus 165 i~~~~~~~~~~~~~l~~~~~~~~ 187 (331)
-.|-|+.+.+..++|.++.++.+
T Consensus 184 ~PFl~~~p~~ya~lL~~ki~~~~ 206 (313)
T d2olra1 184 AAFLSLHPTQYAEVLVKRMQAAG 206 (313)
T ss_dssp GGGCSSCHHHHHHHHHHHHHHHT
T ss_pred cccccccHHHHHHHHHHHHHhcC
Confidence 47888899999999988887654
No 297
>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=77.88 E-value=0.69 Score=35.52 Aligned_cols=28 Identities=32% Similarity=0.386 Sum_probs=21.5
Q ss_pred EEEe-CCCCccHHHHHHHHHHHhcCCCCC
Q 020071 49 LILA-GPPGTGKTTSILALAHELLGPNYR 76 (331)
Q Consensus 49 ~ll~-G~~G~GKt~la~~l~~~l~~~~~~ 76 (331)
+.++ +..|+|||+++..++..+...+..
T Consensus 5 Iav~~~kGGvGKTtia~nLA~~la~~g~~ 33 (237)
T d1g3qa_ 5 ISIVSGKGGTGKTTVTANLSVALGDRGRK 33 (237)
T ss_dssp EEEECSSTTSSHHHHHHHHHHHHHHTTCC
T ss_pred EEEECCCCCCcHHHHHHHHHHHHHhCCCC
Confidence 4455 668899999999999998755433
No 298
>d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]}
Probab=77.06 E-value=1.1 Score=36.90 Aligned_cols=41 Identities=27% Similarity=0.450 Sum_probs=27.9
Q ss_pred CCCcccc----CHHHHHHHHHHHHc---CCCCeEEEeCCCCccHHHHH
Q 020071 23 KVCDIVG----NLDAVARLGIIARD---GNMPNLILAGPPGTGKTTSI 63 (331)
Q Consensus 23 ~~~~~ig----~~~~~~~l~~~l~~---~~~~~~ll~G~~G~GKt~la 63 (331)
.|+.+.+ |+++.+.+...+.. |.-..++-||..|+|||+..
T Consensus 53 ~FD~vf~~~~~q~~vy~~v~~~v~~~l~G~n~~i~aYGqtgSGKT~T~ 100 (342)
T d1f9va_ 53 KFDKIFDQQDTNVDVFKEVGQLVQSSLDGYNVCIFAYGQTGSGKTFTM 100 (342)
T ss_dssp EESEEECTTCCHHHHHHHHHHHHGGGGGTCCEEEEEECCTTSSHHHHH
T ss_pred ecCeEeCCCCCHHHHHHHhhhhhcchhcccccceeeeeccCCcccccc
Confidence 3555554 67777766655543 44333799999999999766
No 299
>d1ys7a2 c.23.1.1 (A:7-127) Transcriptional regulatory protein PrrA, N-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=76.76 E-value=5.1 Score=26.99 Aligned_cols=72 Identities=10% Similarity=0.155 Sum_probs=45.5
Q ss_pred ceEEEEeC-CCCCCHHHHHHHHHHHHHhcCCcEEEEeeCCC--CCCChhhhcccceeeecCCCHHHHHHHHHHHHHhc
Q 020071 112 HKVVVLDE-ADSMTAGAQQALRRTMEIYSNSTRFALACNVS--SKIIEPIQSRCAIVRFSRLSDEEILSRLMVVVQEE 186 (331)
Q Consensus 112 ~~vviide-~d~l~~~~~~~Ll~~le~~~~~~~~I~~~~~~--~~l~~~l~sr~~~i~~~~~~~~~~~~~l~~~~~~~ 186 (331)
+.++++|- ...++ .-.+.+.+.+-..++.+|+.|... ......+..-+.-+-.+|++.+++...++...++.
T Consensus 46 ~dlvl~D~~mP~~~---G~el~~~ir~~~~~~piI~lt~~~~~~~~~~a~~~Ga~dyl~KP~~~~~L~~~i~~~l~rr 120 (121)
T d1ys7a2 46 PDAIVLDINMPVLD---GVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVKALLRRR 120 (121)
T ss_dssp CSEEEEESSCSSSC---HHHHHHHHHHTTCCCCEEEEECCCTTTCCCTTTTTTCSEEEESSCCHHHHHHHHHHHHHHH
T ss_pred CCEEEEEeeccCcc---cHHHHHHHHhcCCCCEEEEEEeeCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHcC
Confidence 56999984 22222 223444444444566666665442 33445565556778899999999999998877654
No 300
>g1qhh.1 c.37.1.19 (A:,B:,C:,D:) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=76.10 E-value=1.1 Score=40.00 Aligned_cols=23 Identities=26% Similarity=0.440 Sum_probs=16.6
Q ss_pred eEEEeCCCCccHHHHHH-HHHHHh
Q 020071 48 NLILAGPPGTGKTTSIL-ALAHEL 70 (331)
Q Consensus 48 ~~ll~G~~G~GKt~la~-~l~~~l 70 (331)
++++.|.+|+|||+.+- .++..+
T Consensus 26 ~~lV~A~AGSGKT~~lv~ri~~ll 49 (623)
T g1qhh.1 26 PLLIMAGAGSGKTRVLTHRIAYLM 49 (623)
T ss_dssp CEEEEECTTSCHHHHHHHHHHHHH
T ss_pred CEEEEEeCchHHHHHHHHHHHHHH
Confidence 48888999999998664 444433
No 301
>d2akab1 c.37.1.8 (B:6-304) Dynamin G domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=75.82 E-value=1.4 Score=35.28 Aligned_cols=25 Identities=16% Similarity=0.476 Sum_probs=22.0
Q ss_pred CCCeEEEeCCCCccHHHHHHHHHHH
Q 020071 45 NMPNLILAGPPGTGKTTSILALAHE 69 (331)
Q Consensus 45 ~~~~~ll~G~~G~GKt~la~~l~~~ 69 (331)
..|.+++.|.-++|||+++.++...
T Consensus 25 ~~P~ivvvG~~SsGKSsliNaLlg~ 49 (299)
T d2akab1 25 DLPQIAVVGGQSAGKSSVLENFVGR 49 (299)
T ss_dssp CCCEEEEEEBTTSCHHHHHHHHHTS
T ss_pred CCCeEEEEcCCCCCHHHHHHHHhCC
Confidence 4566899999999999999999864
No 302
>d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]}
Probab=75.68 E-value=1.1 Score=37.14 Aligned_cols=35 Identities=17% Similarity=0.193 Sum_probs=23.0
Q ss_pred cCHHHHHHH-HHHH---HcCCCCeEEEeCCCCccHHHHH
Q 020071 29 GNLDAVARL-GIIA---RDGNMPNLILAGPPGTGKTTSI 63 (331)
Q Consensus 29 g~~~~~~~l-~~~l---~~~~~~~~ll~G~~G~GKt~la 63 (331)
.|+++.+.+ ...+ -.|.-..++-||+.|+|||+..
T Consensus 59 ~q~~vy~~~~~plv~~~l~G~n~ti~aYG~tgSGKT~Tm 97 (354)
T d1goja_ 59 KQSDIFDFSIKPTVDDILNGYNGTVFAYGQTGAGKSYTM 97 (354)
T ss_dssp CHHHHHHHHTHHHHHHHTTTCCEEEEEECSTTSSHHHHH
T ss_pred CHHHHHHHHHHHHHHHhhccCceeEEecccCCCCcceee
Confidence 456666533 3333 3455444899999999999764
No 303
>d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}
Probab=75.36 E-value=0.69 Score=38.08 Aligned_cols=37 Identities=24% Similarity=0.358 Sum_probs=24.7
Q ss_pred ccCHHHHHH-----HHHHHHcCCCCeEEEeCCCCccHHHHHH
Q 020071 28 VGNLDAVAR-----LGIIARDGNMPNLILAGPPGTGKTTSIL 64 (331)
Q Consensus 28 ig~~~~~~~-----l~~~l~~~~~~~~ll~G~~G~GKt~la~ 64 (331)
..|+++.+. +...+.+|....++-||..|+|||+...
T Consensus 62 ~~q~~vy~~~~~plv~~~~~~G~n~~i~aYGqTGSGKTyTm~ 103 (330)
T d1ry6a_ 62 VDNFTVYENTIKPLIIDLYENGCVCSCFAYGQTGSGKTYTML 103 (330)
T ss_dssp CCHHHHHHHHTHHHHHHHHHHCCEEEEEEECCTTSSHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCeEEEeeeccccccceeee
Confidence 446666653 2344445654348999999999998763
No 304
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=74.86 E-value=2 Score=33.72 Aligned_cols=43 Identities=21% Similarity=0.321 Sum_probs=32.8
Q ss_pred CCceEEEEeCC-CCCCHHHHHHHHHHHHHhcC-CcEEEEeeCCCC
Q 020071 110 GKHKVVVLDEA-DSMTAGAQQALRRTMEIYSN-STRFALACNVSS 152 (331)
Q Consensus 110 ~~~~vviide~-d~l~~~~~~~Ll~~le~~~~-~~~~I~~~~~~~ 152 (331)
.+..+++|||+ ..|++..+..|.+++..... ...+|++|.++.
T Consensus 224 ~~~~llllDEp~~~Ld~~~~~~l~~~l~~~~~~~~qviv~TH~~~ 268 (292)
T g1f2t.1 224 GEISLLILDEPTPYLDEERRRKLITIMERYLKKIPQVILVSHDEE 268 (292)
T ss_dssp SSCSEEEEESCSCTTCHHHHHHHHHHHHHTGGGSSEEEEEESCGG
T ss_pred CCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEeecHH
Confidence 34669999996 47788999999999987643 357888887644
No 305
>d1ii2a1 c.91.1.1 (A:201-523) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Trypanosoma cruzi [TaxId: 5693]}
Probab=74.68 E-value=0.66 Score=37.80 Aligned_cols=27 Identities=15% Similarity=-0.013 Sum_probs=19.9
Q ss_pred cceeeecCCCHHHHHHHHHHHHHhcCC
Q 020071 162 CAIVRFSRLSDEEILSRLMVVVQEEKV 188 (331)
Q Consensus 162 ~~~i~~~~~~~~~~~~~l~~~~~~~~~ 188 (331)
|---.|-|+.+....+.|.++.++.+.
T Consensus 182 cfg~PFl~~~p~~ya~~L~~~i~~~~~ 208 (323)
T d1ii2a1 182 CFGGPFLVRHATFYGEQLAEKMQKHNS 208 (323)
T ss_dssp GGCGGGCCSCHHHHHHHHHHHHHHHTC
T ss_pred cccccccccChHHHHHHHHHHHHhcCc
Confidence 444477788888888888888776653
No 306
>d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]}
Probab=73.40 E-value=0.72 Score=38.54 Aligned_cols=35 Identities=29% Similarity=0.335 Sum_probs=23.0
Q ss_pred cCHHHHHHHHHH---HHcCCCCeEEEeCCCCccHHHHH
Q 020071 29 GNLDAVARLGII---ARDGNMPNLILAGPPGTGKTTSI 63 (331)
Q Consensus 29 g~~~~~~~l~~~---l~~~~~~~~ll~G~~G~GKt~la 63 (331)
.|+++.+.+... +-.|.-..++-||+.|+|||+..
T Consensus 55 ~q~~vy~~v~~lv~~~l~G~n~~i~aYGqTGSGKTyTm 92 (364)
T d1sdma_ 55 TQDDVFEDTKYLVQSAVDGYNVCIFAYGQTGSGKTFTI 92 (364)
T ss_dssp CHHHHHHTTTHHHHHHHTTCEEEEEEECSTTSSHHHHH
T ss_pred CHHHHHHHHHHHHHHHhcCCceeeeccccCCCCccccc
Confidence 355666544333 33454333899999999999874
No 307
>d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=73.31 E-value=0.72 Score=38.59 Aligned_cols=35 Identities=26% Similarity=0.350 Sum_probs=22.5
Q ss_pred cCHHHHHHHHHH---HHcCCCCeEEEeCCCCccHHHHH
Q 020071 29 GNLDAVARLGII---ARDGNMPNLILAGPPGTGKTTSI 63 (331)
Q Consensus 29 g~~~~~~~l~~~---l~~~~~~~~ll~G~~G~GKt~la 63 (331)
.|+++.+.+... +-.|.-..++-||+.|+|||+..
T Consensus 105 ~Q~~Vy~~v~plv~~vl~G~n~ti~aYGqtGSGKT~Tm 142 (368)
T d2ncda_ 105 SQSDIFEMVSPLIQSALDGYNICIFAYGQTGSGKTYTM 142 (368)
T ss_dssp CHHHHHTTTHHHHHHHHTTCEEEEEEECSTTSSHHHHH
T ss_pred CccchHHHHHHHHHHHhcccceeEEeeccCCCccceEe
Confidence 356665543333 33455334899999999999764
No 308
>d2qn6a3 c.37.1.8 (A:2-206) Initiation factor eIF2 gamma subunit, N-terminal (G) domain {Sulfolobus solfataricus [TaxId: 2287]}
Probab=73.18 E-value=11 Score=27.84 Aligned_cols=23 Identities=30% Similarity=0.433 Sum_probs=19.8
Q ss_pred CCe--EEEeCCCCccHHHHHHHHHH
Q 020071 46 MPN--LILAGPPGTGKTTSILALAH 68 (331)
Q Consensus 46 ~~~--~ll~G~~G~GKt~la~~l~~ 68 (331)
-|| +.+.|....||||++.++..
T Consensus 6 ~p~ini~iiGhVd~GKSTL~~~L~~ 30 (205)
T d2qn6a3 6 QPEVNIGVVGHVDHGKTTLVQAITG 30 (205)
T ss_dssp CCCEEEEEECSTTSSHHHHHHHHHS
T ss_pred CCCeEEEEEEccCCcHHHHHHHHHh
Confidence 355 79999999999999999964
No 309
>d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]}
Probab=73.00 E-value=1.4 Score=36.42 Aligned_cols=35 Identities=23% Similarity=0.206 Sum_probs=22.6
Q ss_pred cCHHHHHHH----HHHHHcCCCCeEEEeCCCCccHHHHH
Q 020071 29 GNLDAVARL----GIIARDGNMPNLILAGPPGTGKTTSI 63 (331)
Q Consensus 29 g~~~~~~~l----~~~l~~~~~~~~ll~G~~G~GKt~la 63 (331)
.|+++...+ ...+-.|.-..++-||+.|+|||+..
T Consensus 60 ~q~~vy~~~~~~lv~~~l~G~n~~i~aYGqtgSGKTyTm 98 (345)
T d1x88a1 60 KQIDVYRSVVCPILDEVIMGYNCTIFAYGQTGTGKTFTM 98 (345)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCEEEEEEEECTTSSHHHHH
T ss_pred CHHHHHHHHHHHhHHHHhccCCceEEeeeeccccceEEe
Confidence 356665533 23333455334899999999999764
No 310
>d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]}
Probab=72.90 E-value=1.6 Score=36.01 Aligned_cols=34 Identities=18% Similarity=0.205 Sum_probs=23.0
Q ss_pred CHHHHHH----HHHHHHcCCCCeEEEeCCCCccHHHHH
Q 020071 30 NLDAVAR----LGIIARDGNMPNLILAGPPGTGKTTSI 63 (331)
Q Consensus 30 ~~~~~~~----l~~~l~~~~~~~~ll~G~~G~GKt~la 63 (331)
|+++.+. +...+-.|....++-||..|+|||+..
T Consensus 67 Q~~vy~~~~~plv~~~l~G~n~ti~aYGqTgSGKT~Tm 104 (349)
T d2zfia1 67 QKQVYRDIGEEMLQHAFEGYNVCIFAYGQTGAGKSYTM 104 (349)
T ss_dssp HHHHHHHTHHHHHHHHHTTCCEEEEEECSTTSSHHHHH
T ss_pred HHHHHHHhhHHHHHHHHhccCceeeeeccCCCCCceee
Confidence 5555553 333344565444899999999999876
No 311
>d1c9ka_ c.37.1.11 (A:) Adenosylcobinamide kinase/adenosylcobinamide phosphate guanylyltransferase CobU {Salmonella typhimurium [TaxId: 90371]}
Probab=70.45 E-value=1.2 Score=33.04 Aligned_cols=20 Identities=25% Similarity=0.423 Sum_probs=17.8
Q ss_pred EEEeCCCCccHHHHHHHHHH
Q 020071 49 LILAGPPGTGKTTSILALAH 68 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~ 68 (331)
+|+.|+.++|||.+|..++.
T Consensus 2 iLVtGGarSGKS~~AE~l~~ 21 (180)
T d1c9ka_ 2 ILVTGGARSGKSRHAEALIG 21 (180)
T ss_dssp EEEEECTTSSHHHHHHHHHC
T ss_pred EEEECCCCccHHHHHHHHHh
Confidence 58999999999999998763
No 312
>d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]}
Probab=68.03 E-value=1.4 Score=36.69 Aligned_cols=36 Identities=22% Similarity=0.181 Sum_probs=23.1
Q ss_pred cCHHHHHH----HHHHHHcCCCCeEEEeCCCCccHHHHHH
Q 020071 29 GNLDAVAR----LGIIARDGNMPNLILAGPPGTGKTTSIL 64 (331)
Q Consensus 29 g~~~~~~~----l~~~l~~~~~~~~ll~G~~G~GKt~la~ 64 (331)
.|+++.+. +...+-.|.-..++-||..|+|||+...
T Consensus 93 ~Q~~Vy~~~~~plv~~~l~G~n~tifaYGqTGSGKTyTm~ 132 (362)
T d1v8ka_ 93 SNEVVYRFTARPLVQTIFEGGKATCFAYGQTGSGKTHTMG 132 (362)
T ss_dssp CHHHHHHHTTHHHHHHHHTTCEEEEEEEESTTSSHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhccCceEEeeccCCCCCceeee
Confidence 35666653 2223334553348999999999997753
No 313
>d1jwyb_ c.37.1.8 (B:) Dynamin G domain {Dictyostelium discoideum [TaxId: 44689]}
Probab=67.58 E-value=1.6 Score=35.07 Aligned_cols=25 Identities=16% Similarity=0.577 Sum_probs=21.8
Q ss_pred CCCeEEEeCCCCccHHHHHHHHHHH
Q 020071 45 NMPNLILAGPPGTGKTTSILALAHE 69 (331)
Q Consensus 45 ~~~~~ll~G~~G~GKt~la~~l~~~ 69 (331)
.+|.+++.|..++|||+++.++...
T Consensus 23 ~lP~ivVvG~~ssGKSSliNaLlG~ 47 (306)
T d1jwyb_ 23 DLPQIVVVGSQSSGKSSVLENIVGR 47 (306)
T ss_dssp CCCEEEEEECSSSSHHHHHHHHHTS
T ss_pred CCCeEEEEeCCCCCHHHHHHHHhCC
Confidence 3566899999999999999999864
No 314
>d1tafb_ a.22.1.3 (B:) TAF(II)62 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=66.87 E-value=7.3 Score=23.43 Aligned_cols=53 Identities=4% Similarity=0.051 Sum_probs=38.5
Q ss_pred HHHHHHhcCC-CCCHHHHHHHHHhcCCCHHHHHHHHHHHh--hCCCccchhhhhhh
Q 020071 179 LMVVVQEEKV-PYVPEGLEAIIFTADGDMRQALNNLQATY--SGFRFVNQENVFKV 231 (331)
Q Consensus 179 l~~~~~~~~~-~i~~~~~~~l~~~~~g~~r~~~~~l~~~~--~~~~~i~~~~v~~~ 231 (331)
++.++..-|+ .++++++..|+.-..--++++++..-+.- +.+..+|.+||...
T Consensus 12 ik~iAeS~Gi~~l~de~a~~LA~DveYRl~eiiQeA~KFMrhskR~~Ltt~Did~A 67 (70)
T d1tafb_ 12 MKVIAESIGVGSLSDDAAKELAEDVSIKLKRIVQDAAKFMNHAKRQKLSVRDIDMS 67 (70)
T ss_dssp HHHHHHHTTCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSBCHHHHHHH
T ss_pred HHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcCcHHHHHHH
Confidence 3445556788 58999999999888777777777665542 45667888888654
No 315
>d1ni3a1 c.37.1.8 (A:11-306) YchF GTP-binding protein N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=63.83 E-value=1.8 Score=34.67 Aligned_cols=21 Identities=29% Similarity=0.409 Sum_probs=19.4
Q ss_pred EEEeCCCCccHHHHHHHHHHH
Q 020071 49 LILAGPPGTGKTTSILALAHE 69 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~ 69 (331)
+=|.|.|.+||||+-.++.+.
T Consensus 13 iGivG~Pn~GKSTlfnalT~~ 33 (296)
T d1ni3a1 13 TGIVGMPNVGKSTFFRAITKS 33 (296)
T ss_dssp EEEEECSSSSHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHCC
Confidence 689999999999999999975
No 316
>d1wrba1 c.37.1.19 (A:164-401) putative ATP-dependent RNA helicase VlgB {Flatworm (Dugesia japonica) [TaxId: 6161]}
Probab=62.30 E-value=3.3 Score=31.88 Aligned_cols=30 Identities=17% Similarity=0.380 Sum_probs=20.1
Q ss_pred HHHHcCCCCeEEEeCCCCccHHH-HHHHHHHHh
Q 020071 39 IIARDGNMPNLILAGPPGTGKTT-SILALAHEL 70 (331)
Q Consensus 39 ~~l~~~~~~~~ll~G~~G~GKt~-la~~l~~~l 70 (331)
..+.+|+ ++++..|+|+|||. ++--+.+.+
T Consensus 53 p~il~g~--dvvi~a~TGsGKTlayllp~l~~l 83 (238)
T d1wrba1 53 PAILEHR--DIMACAQTGSGKTAAFLIPIINHL 83 (238)
T ss_dssp HHHHTTC--CEEEECCTTSSHHHHHHHHHHHHH
T ss_pred hhhhCCC--CEEEECCCCCCcceeeHHHHHHHH
Confidence 3344554 69999999999996 334444444
No 317
>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}
Probab=61.75 E-value=8 Score=25.75 Aligned_cols=69 Identities=12% Similarity=0.172 Sum_probs=41.9
Q ss_pred ceEEEEeCCCCCCHHHHHHHHHHHHHhcCCcEEEEeeCCCC--CCChhhhcccceeeecCCCHHHHHHHHHHH
Q 020071 112 HKVVVLDEADSMTAGAQQALRRTMEIYSNSTRFALACNVSS--KIIEPIQSRCAIVRFSRLSDEEILSRLMVV 182 (331)
Q Consensus 112 ~~vviide~d~l~~~~~~~Ll~~le~~~~~~~~I~~~~~~~--~l~~~l~sr~~~i~~~~~~~~~~~~~l~~~ 182 (331)
+.++++| . .++....-.+++.+....+++++|+.|.... .....+..-+.-+-.+|.+.+++.+.+++.
T Consensus 47 ~dliilD-~-~mp~~~G~e~~~~ir~~~~~~pvi~ls~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~l~~v 117 (118)
T d1u0sy_ 47 PDIVTMD-I-TMPEMNGIDAIKEIMKIDPNAKIIVCSAMGQQAMVIEAIKAGAKDFIVKPFQPSRVVEALNKV 117 (118)
T ss_dssp CSEEEEE-C-SCGGGCHHHHHHHHHHHCTTCCEEEEECTTCHHHHHHHHHTTCCEEEESSCCHHHHHHHHHHH
T ss_pred CCEEEEe-c-CCCCCCHHHHHHHHHHhCCCCcEEEEEccCCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHh
Confidence 5699998 3 3333233344444433445677776664432 233455555677888999999999888764
No 318
>d1a04a2 c.23.1.1 (A:5-142) Nitrate/nitrite response regulator (NarL), receiver domain {Escherichia coli [TaxId: 562]}
Probab=61.35 E-value=17 Score=24.73 Aligned_cols=85 Identities=12% Similarity=0.096 Sum_probs=49.9
Q ss_pred ceEEEEeCCCCCCHHHHHHHHHHHHHhcCCcEEEEeeCCC--CCCChhhhcccceeeecCCCHHHHHHHHHHHHHhcCCC
Q 020071 112 HKVVVLDEADSMTAGAQQALRRTMEIYSNSTRFALACNVS--SKIIEPIQSRCAIVRFSRLSDEEILSRLMVVVQEEKVP 189 (331)
Q Consensus 112 ~~vviide~d~l~~~~~~~Ll~~le~~~~~~~~I~~~~~~--~~l~~~l~sr~~~i~~~~~~~~~~~~~l~~~~~~~~~~ 189 (331)
+.++++|= .|+....-.+++.+.+..+++.+|+.|... ......++.-+.-+-.+|.+.+++.+.+++.++.+. .
T Consensus 49 ~DlvllD~--~mP~~~G~el~~~ir~~~~~~~vivlt~~~~~~~~~~a~~~Ga~~yl~Kp~~~~~L~~~i~~v~~g~~-~ 125 (138)
T d1a04a2 49 PDLILLDL--NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM-V 125 (138)
T ss_dssp CSEEEEET--TSTTSCHHHHHHHHHHSCCCSEEEEEECCCCHHHHHHHHHTTCSEEEETTCCHHHHHHHHHHHHHSCC-C
T ss_pred CCEEEEec--CCCCCCHHHHHHHHHhhCCCCCEEEEEEECCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHCCCC-c
Confidence 45888872 122222334555555545556665555332 233345554566688899999999999998775433 3
Q ss_pred CCHHHHHHHH
Q 020071 190 YVPEGLEAII 199 (331)
Q Consensus 190 i~~~~~~~l~ 199 (331)
+++.....++
T Consensus 126 ~~~~~~~~la 135 (138)
T d1a04a2 126 LSEALTPVLA 135 (138)
T ss_dssp CCTTTHHHHH
T ss_pred CCHHHHHHHH
Confidence 5555444444
No 319
>d1wd5a_ c.61.1.1 (A:) Putative phosphoribosyltransferase TT1426 (TTHA1462) {Thermus thermophilus [TaxId: 274]}
Probab=61.12 E-value=27 Score=25.60 Aligned_cols=40 Identities=20% Similarity=0.099 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHcCCCCeEEEeCCCCccHHHHHHHHHHHhc
Q 020071 31 LDAVARLGIIARDGNMPNLILAGPPGTGKTTSILALAHELL 71 (331)
Q Consensus 31 ~~~~~~l~~~l~~~~~~~~ll~G~~G~GKt~la~~l~~~l~ 71 (331)
.++-+.|.+.+......+.++.|.+ .|=-.+|..+++.+.
T Consensus 7 ~~Ag~~LA~~l~~~~~~~~vVl~ip-~ggv~~A~~iA~~L~ 46 (208)
T d1wd5a_ 7 RHAGALLAEALAPLGLEAPVVLGLP-RGGVVVADEVARRLG 46 (208)
T ss_dssp HHHHHHHHHHHGGGCCCSCEEEECT-THHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCCCCEEEeCC-CCcHHHHHHHHHHcC
Confidence 4445567777766555565556665 344566778888884
No 320
>d1qkka_ c.23.1.1 (A:) Transcriptional regulatory protein DctD, receiver domain {Sinorhizobium meliloti [TaxId: 382]}
Probab=60.42 E-value=4.4 Score=28.14 Aligned_cols=74 Identities=12% Similarity=0.083 Sum_probs=45.7
Q ss_pred CCceEEEEeCCCCCCHHHHHHHHHHHHHhcCCcEEEEeeCCC--CCCChhhhcccceeeecCCCHHHHHHHHHHHHHh
Q 020071 110 GKHKVVVLDEADSMTAGAQQALRRTMEIYSNSTRFALACNVS--SKIIEPIQSRCAIVRFSRLSDEEILSRLMVVVQE 185 (331)
Q Consensus 110 ~~~~vviide~d~l~~~~~~~Ll~~le~~~~~~~~I~~~~~~--~~l~~~l~sr~~~i~~~~~~~~~~~~~l~~~~~~ 185 (331)
..+.+|++| . .|+.-..-.+++.+.+..+++.+|+.|... .....+++.-+.-+-.+|++.+++...+++...+
T Consensus 43 ~~~dlil~D-~-~mP~~~G~el~~~lr~~~~~~pvI~lT~~~~~~~~~~a~~~Ga~dyl~KP~~~~~L~~~i~~~~~~ 118 (140)
T d1qkka_ 43 DFAGIVISD-I-RMPGMDGLALFRKILALDPDLPMILVTGHGDIPMAVQAIQDGAYDFIAKPFAADRLVQSARRAEEK 118 (140)
T ss_dssp TCCSEEEEE-S-CCSSSCHHHHHHHHHHHCTTSCEEEEECGGGHHHHHHHHHTTCCEEEESSCCHHHHHHHHHHHHHH
T ss_pred cCcchHHHh-h-ccCCCCHHHHHHHHHHhCCCCcEEEEECCCCHHHHHHHHHcCCCEeecCCCCHHHHHHHHHHHHHH
Confidence 345688888 2 233323334454444445567777776433 3344556655677888999999998888776543
No 321
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=60.27 E-value=4.8 Score=32.09 Aligned_cols=41 Identities=20% Similarity=0.302 Sum_probs=31.3
Q ss_pred CceEEEEeCCC-CCCHHHHHHHHHHHHHhcCC-cEEEEeeCCC
Q 020071 111 KHKVVVLDEAD-SMTAGAQQALRRTMEIYSNS-TRFALACNVS 151 (331)
Q Consensus 111 ~~~vviide~d-~l~~~~~~~Ll~~le~~~~~-~~~I~~~~~~ 151 (331)
+..+++|||++ .|++..+..+.+++.+.... ..+|++|.++
T Consensus 302 ~~~illiDEpe~~Lh~~~~~~l~~~l~~~~~~~~QviitTHs~ 344 (369)
T g1ii8.1 302 EISLLILDEPTPYLDEERRRKLITIMERYLKKIPQVILVSHDE 344 (369)
T ss_dssp SCSEEEEECCSSSSCSHHHHHHHHHHHHTGGGSSEEEEEESCG
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEechH
Confidence 45699999986 56888999999999875443 3677877664
No 322
>d1f5na2 c.37.1.8 (A:7-283) Interferon-induced guanylate-binding protein 1 (GBP1), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=60.18 E-value=1.8 Score=34.45 Aligned_cols=42 Identities=26% Similarity=0.268 Sum_probs=28.2
Q ss_pred cccCHHHHHHHHHHHHcCCCCeEEEeCCCCccHHHHHHHHHHHh
Q 020071 27 IVGNLDAVARLGIIARDGNMPNLILAGPPGTGKTTSILALAHEL 70 (331)
Q Consensus 27 ~ig~~~~~~~l~~~l~~~~~~~~ll~G~~G~GKt~la~~l~~~l 70 (331)
+.-.+++++.|... .+...-|-+.||.++|||++...+....
T Consensus 15 l~~~~e~l~~l~~~--~~~v~vvsi~G~~~sGKS~llN~l~~~~ 56 (277)
T d1f5na2 15 LMANPEALKILSAI--TQPMVVVAIVGLYRTGKSYLMNKLAGKK 56 (277)
T ss_dssp EEECHHHHHHHHTC--CSBEEEEEEEEBTTSSHHHHHHHHTTCS
T ss_pred EEECHHHHHHHHcC--CCCEEEEEEECCCCCCHHHHHHHHcCCC
Confidence 44566666655442 2222226899999999999999887643
No 323
>d1dbwa_ c.23.1.1 (A:) Transcriptional regulatory protein FixJ, receiver domain {Rhizobium meliloti [TaxId: 382]}
Probab=59.56 E-value=14 Score=24.61 Aligned_cols=71 Identities=13% Similarity=0.082 Sum_probs=44.4
Q ss_pred CceEEEEeCCCCCCHHHHHHHHHHHHHhcCCcEEEEeeCCCC--CCChhhhcccceeeecCCCHHHHHHHHHHHH
Q 020071 111 KHKVVVLDEADSMTAGAQQALRRTMEIYSNSTRFALACNVSS--KIIEPIQSRCAIVRFSRLSDEEILSRLMVVV 183 (331)
Q Consensus 111 ~~~vviide~d~l~~~~~~~Ll~~le~~~~~~~~I~~~~~~~--~l~~~l~sr~~~i~~~~~~~~~~~~~l~~~~ 183 (331)
.+.++++|= .|+.-..-.+++.+.+..+++.+|+.|.... .....++.-+.-+-.+|++.+++...+++..
T Consensus 47 ~~dlvi~D~--~mp~~~G~e~~~~lr~~~~~~~iI~lt~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~i~~a~ 119 (123)
T d1dbwa_ 47 RNGVLVTDL--RMPDMSGVELLRNLGDLKINIPSIVITGHGDVPMAVEAMKAGAVDFIEKPFEDTVIIEAIERAS 119 (123)
T ss_dssp CSEEEEEEC--CSTTSCHHHHHHHHHHTTCCCCEEEEECTTCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHH
T ss_pred CCcEEEEec--cCccccchHHHHHHHhcCCCCeEEEEEeeCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHH
Confidence 367888884 2222223345555555555677777665432 3335555556677889999999999888754
No 324
>d1puja_ c.37.1.8 (A:) Probable GTPase YlqF {Bacillus subtilis [TaxId: 1423]}
Probab=59.49 E-value=5.4 Score=31.31 Aligned_cols=21 Identities=38% Similarity=0.570 Sum_probs=19.5
Q ss_pred EEEeCCCCccHHHHHHHHHHH
Q 020071 49 LILAGPPGTGKTTSILALAHE 69 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~ 69 (331)
+.+.|-|.+|||+++..+...
T Consensus 115 v~vvG~PNvGKSsliN~L~~~ 135 (273)
T d1puja_ 115 ALIIGIPNVGKSTLINRLAKK 135 (273)
T ss_dssp EEEEESTTSSHHHHHHHHHTS
T ss_pred EEEEecCccchhhhhhhhhcc
Confidence 799999999999999999864
No 325
>d1krwa_ c.23.1.1 (A:) NTRC receiver domain {Salmonella typhimurium [TaxId: 90371]}
Probab=57.60 E-value=5.5 Score=26.84 Aligned_cols=73 Identities=11% Similarity=0.024 Sum_probs=44.6
Q ss_pred CceEEEEeCCCCCCHHHHHHHHHHHHHhcCCcEEEEeeCCCC--CCChhhhcccceeeecCCCHHHHHHHHHHHHHh
Q 020071 111 KHKVVVLDEADSMTAGAQQALRRTMEIYSNSTRFALACNVSS--KIIEPIQSRCAIVRFSRLSDEEILSRLMVVVQE 185 (331)
Q Consensus 111 ~~~vviide~d~l~~~~~~~Ll~~le~~~~~~~~I~~~~~~~--~l~~~l~sr~~~i~~~~~~~~~~~~~l~~~~~~ 185 (331)
.+.++++|- .++....-.+++.+.+..+++++|+.|.... .....+..-+.-+-.+|.+.+++...+++....
T Consensus 47 ~~dlii~D~--~mp~~~G~el~~~l~~~~~~~piI~~t~~~~~~~~~~a~~~Ga~dyl~KP~~~~eL~~~i~~~l~~ 121 (123)
T d1krwa_ 47 TPDVLLSDI--RMPGMDGLALLKQIKQRHPMLPVIIMTAHSDLDAAVSAYQQGAFDYLPKPFDIDEAVALVERAISH 121 (123)
T ss_dssp CCSEEEECC--SSSSSTTHHHHHHHHHHSSSCCEEESCCCSCHHHHHHHHHHTEEEECSSCCHHHHHHHHHHHHHHH
T ss_pred CCCEEEehh--hcCCchHHHHHHHHHHhCCCCeEEEEecCCCHHHHHHHHHcCCCeEEeCcCCHHHHHHHHHHHHHc
Confidence 467999982 2333233344544544455778877765543 223444444556778899999999888876543
No 326
>d1p2fa2 c.23.1.1 (A:1-120) Response regulator DrrB {Thermotoga maritima [TaxId: 2336]}
Probab=57.45 E-value=16 Score=24.22 Aligned_cols=74 Identities=18% Similarity=0.182 Sum_probs=45.8
Q ss_pred CceEEEEeCCCCCCHHHHHHHHHHHHHhcCCcEEEEeeCCCC--CCChhhhcccceeeecCCCHHHHHHHHHHHHHhc
Q 020071 111 KHKVVVLDEADSMTAGAQQALRRTMEIYSNSTRFALACNVSS--KIIEPIQSRCAIVRFSRLSDEEILSRLMVVVQEE 186 (331)
Q Consensus 111 ~~~vviide~d~l~~~~~~~Ll~~le~~~~~~~~I~~~~~~~--~l~~~l~sr~~~i~~~~~~~~~~~~~l~~~~~~~ 186 (331)
.+.+|++|= .|+.-..-.+++.+...++++.+|+.|.... .....+..=+.-+-.+|++.+++...+++..++.
T Consensus 43 ~~dlillD~--~mP~~~G~~~~~~lr~~~~~~~ii~it~~~~~~~~~~a~~~Ga~dyl~KP~~~~~L~~~i~~~l~r~ 118 (120)
T d1p2fa2 43 AFHVVVLDV--MLPDYSGYEICRMIKETRPETWVILLTLLSDDESVLKGFEAGADDYVTKPFNPEILLARVKRFLERE 118 (120)
T ss_dssp CCSEEEEES--BCSSSBHHHHHHHHHHHCTTSEEEEEESCCSHHHHHHHHHHTCSEEEESSCCHHHHHHHHHHHHHHC
T ss_pred CCCEEEEeC--cccccchhHHHHHHhhcCCCCcEEEEecCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHc
Confidence 356999983 2222222345555555555677777664432 2334444446678899999999999988876543
No 327
>d1w36b1 c.37.1.19 (B:1-485) Exodeoxyribonuclease V beta chain (RecB), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=56.98 E-value=3.7 Score=34.83 Aligned_cols=24 Identities=29% Similarity=0.385 Sum_probs=18.2
Q ss_pred eEEEeCCCCccHHHH-HHHHHHHhc
Q 020071 48 NLILAGPPGTGKTTS-ILALAHELL 71 (331)
Q Consensus 48 ~~ll~G~~G~GKt~l-a~~l~~~l~ 71 (331)
++|+.+.+|+|||+. +..++..+.
T Consensus 18 ~~lv~A~AGsGKT~~l~~r~~~ll~ 42 (485)
T d1w36b1 18 ERLIEASAGTGKTFTIAALYLRLLL 42 (485)
T ss_dssp CEEEECCTTSCHHHHHHHHHHHHHT
T ss_pred CeEEEEcCchHHHHHHHHHHHHHHh
Confidence 379999999999974 555666553
No 328
>d1zunb3 c.37.1.8 (B:16-237) Sulfate adenylate transferase subunit cysN/C, EF-Tu domain G-like domain {Pseudomonas syringae pv. tomato [TaxId: 323]}
Probab=55.67 E-value=36 Score=25.28 Aligned_cols=22 Identities=32% Similarity=0.427 Sum_probs=19.5
Q ss_pred EEEeCCCCccHHHHHHHHHHHh
Q 020071 49 LILAGPPGTGKTTSILALAHEL 70 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l 70 (331)
+.+.|-...||||++.++....
T Consensus 12 i~viGHVd~GKSTL~~~Ll~~~ 33 (222)
T d1zunb3 12 FLTCGNVDDGKSTLIGRLLHDS 33 (222)
T ss_dssp EEEECCTTSSHHHHHHHHHHHT
T ss_pred EEEEcCCCCCHHHHHHHHHHHc
Confidence 7899999999999999997654
No 329
>d1ny5a1 c.23.1.1 (A:1-137) Transcriptional activator sigm54 (NtrC1), N-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=55.48 E-value=14 Score=25.23 Aligned_cols=71 Identities=14% Similarity=0.058 Sum_probs=44.7
Q ss_pred ceEEEEeCCCCCCHHHHHHHHHHHHHhcCCcEEEEeeCCC--CCCChhhhcccceeeecCCCHHHHHHHHHHHHH
Q 020071 112 HKVVVLDEADSMTAGAQQALRRTMEIYSNSTRFALACNVS--SKIIEPIQSRCAIVRFSRLSDEEILSRLMVVVQ 184 (331)
Q Consensus 112 ~~vviide~d~l~~~~~~~Ll~~le~~~~~~~~I~~~~~~--~~l~~~l~sr~~~i~~~~~~~~~~~~~l~~~~~ 184 (331)
+.+|++|- .++....-.+++.+.+..+++++|+.|... ......++.=+.-+-.+|.+.+++...+.+...
T Consensus 45 ~dlvilD~--~mp~~~G~e~~~~lr~~~~~~piI~lT~~~~~~~~~~a~~~Ga~dyl~KP~~~~~L~~~i~~~l~ 117 (137)
T d1ny5a1 45 FNVVLLDL--LLPDVNGLEILKWIKERSPETEVIVITGHGTIKTAVEAMKMGAYDFLTKPCMLEEIELTINKAIE 117 (137)
T ss_dssp CSEEEEES--BCSSSBHHHHHHHHHHHCTTSEEEEEEETTCHHHHHHHHTTTCCEEEEESCCHHHHHHHHHHHHH
T ss_pred cccchHHH--hhhhhhHHHHHHHHHHhCCCCCEEEEECCCCHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHH
Confidence 56999983 333333345555555555677777776543 223345544456677889999999888876543
No 330
>d2b4aa1 c.23.1.1 (A:2-119) Hypothetical protein BH3024 {Bacillus halodurans [TaxId: 86665]}
Probab=52.19 E-value=23 Score=23.31 Aligned_cols=67 Identities=6% Similarity=0.041 Sum_probs=40.2
Q ss_pred ceEEEEeCCCCCCHHHHHHHHHHHHHhcCCcEEEEeeCCCCCCChhhhcccceeeecCCCHHHHHHHHHH
Q 020071 112 HKVVVLDEADSMTAGAQQALRRTMEIYSNSTRFALACNVSSKIIEPIQSRCAIVRFSRLSDEEILSRLMV 181 (331)
Q Consensus 112 ~~vviide~d~l~~~~~~~Ll~~le~~~~~~~~I~~~~~~~~l~~~l~sr~~~i~~~~~~~~~~~~~l~~ 181 (331)
+.+|++|- .|+....-.+++.+.+-+.++.+|+.|.......... ....-+-.+|++.+++...++.
T Consensus 48 ~dliilD~--~lp~~~G~el~~~ir~~~~~~pii~lt~~~~~~~~~~-~~~~dyl~KP~~~~eL~~~i~~ 114 (118)
T d2b4aa1 48 CDLLIVSD--QLVDLSIFSLLDIVKEQTKQPSVLILTTGRHELIESS-EHNLSYLQKPFAISELRAAIDY 114 (118)
T ss_dssp CSEEEEET--TCTTSCHHHHHHHHTTSSSCCEEEEEESCC--CCCCS-SSCEEEEESSCCHHHHHHHHHH
T ss_pred CCEEEEeC--CCCCCCHHHHHHHHHhcCCCCcEEEEECCccHHHHHh-hcCCCEEECCCCHHHHHHHHHH
Confidence 56999984 2332233455566665556778877775543332222 2223467799999999888865
No 331
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=51.87 E-value=8.8 Score=31.63 Aligned_cols=40 Identities=18% Similarity=0.205 Sum_probs=31.3
Q ss_pred ceEEEEeCCCC-CCHHHHHHHHHHHHHh-cCCcEEEEeeCCC
Q 020071 112 HKVVVLDEADS-MTAGAQQALRRTMEIY-SNSTRFALACNVS 151 (331)
Q Consensus 112 ~~vviide~d~-l~~~~~~~Ll~~le~~-~~~~~~I~~~~~~ 151 (331)
..++++||++. |.+.....+.++|.+. ..++.+|++|.++
T Consensus 355 ~pililDE~d~~Ld~~~~~~~~~~l~~~~~~~~Q~I~iTH~~ 396 (427)
T d1w1wa_ 355 SPFFVLDEVDAALDITNVQRIAAYIRRHRNPDLQFIVISLKN 396 (427)
T ss_dssp CSEEEESSTTTTCCHHHHHHHHHHHHHHCBTTBEEEEECSCH
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEeCCH
Confidence 45999999986 7787788888888654 4567899998764
No 332
>d1kgsa2 c.23.1.1 (A:2-123) PhoB receiver domain {Thermotoga maritima [TaxId: 2336]}
Probab=50.90 E-value=13 Score=24.66 Aligned_cols=72 Identities=13% Similarity=0.146 Sum_probs=42.5
Q ss_pred ceEEEEeCCCCCCHHHHHHHHHHHHHhcCCcEEEEeeCCCC--CCChhhhcccceeeecCCCHHHHHHHHHHHHHh
Q 020071 112 HKVVVLDEADSMTAGAQQALRRTMEIYSNSTRFALACNVSS--KIIEPIQSRCAIVRFSRLSDEEILSRLMVVVQE 185 (331)
Q Consensus 112 ~~vviide~d~l~~~~~~~Ll~~le~~~~~~~~I~~~~~~~--~l~~~l~sr~~~i~~~~~~~~~~~~~l~~~~~~ 185 (331)
+.++++|= .|+....-.+.+.+...+..+++|+.|.... .....+..-+.-+-.+|++.+++...++...++
T Consensus 46 ~dlillD~--~mp~~~g~~~~~~lr~~~~~~piI~lt~~~~~~~~~~~~~~Ga~~yl~KP~~~~~L~~~i~~~l~r 119 (122)
T d1kgsa2 46 FDVVILDI--MLPVHDGWEILKSMRESGVNTPVLMLTALSDVEYRVKGLNMGADDYLPKPFDLRELIARVRALIRR 119 (122)
T ss_dssp CSEEEEES--CCSSSCHHHHHHHHHHTTCCCCEEEEESSCHHHHHHHTCCCCCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred cccccccc--ccccchhHHHHHHHHhcCCCCcEEEEcCCCCHHHHHHHHHcCCceeecCCCCHHHHHHHHHHHHHH
Confidence 56999983 2222222344444444455667777665432 122233333566788999999999988876654
No 333
>d1jnya3 c.37.1.8 (A:4-227) Elongation factor eEF-1alpha, N-terminal (G) domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=50.50 E-value=5.3 Score=30.27 Aligned_cols=20 Identities=35% Similarity=0.398 Sum_probs=17.9
Q ss_pred EEEeCCCCccHHHHHHHHHH
Q 020071 49 LILAGPPGTGKTTSILALAH 68 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~ 68 (331)
+.+.|--+.||||++..+..
T Consensus 6 i~viGHVd~GKTTL~~~Ll~ 25 (224)
T d1jnya3 6 LIVIGHVDHGKSTLVGRLLM 25 (224)
T ss_dssp EEEEESTTSSHHHHHHHHHH
T ss_pred EEEEecCCCCHHHHHHHHHH
Confidence 78999999999999998854
No 334
>d2pl1a1 c.23.1.1 (A:1-119) PhoP receiver domain {Escherichia coli [TaxId: 562]}
Probab=50.10 E-value=22 Score=23.41 Aligned_cols=70 Identities=13% Similarity=0.131 Sum_probs=43.3
Q ss_pred ceEEEEeC-CCCCCHHHHHHHHHHHHHhcCCcEEEEeeCCCC--CCChhhhcccceeeecCCCHHHHHHHHHHHHH
Q 020071 112 HKVVVLDE-ADSMTAGAQQALRRTMEIYSNSTRFALACNVSS--KIIEPIQSRCAIVRFSRLSDEEILSRLMVVVQ 184 (331)
Q Consensus 112 ~~vviide-~d~l~~~~~~~Ll~~le~~~~~~~~I~~~~~~~--~l~~~l~sr~~~i~~~~~~~~~~~~~l~~~~~ 184 (331)
+.++++|- ...++. -.+++.+..-++++++|+.|.... .....+..-+.-+-.+|++.+++...++...+
T Consensus 45 ~dliilD~~mP~~~G---~e~~~~i~~~~~~~pvi~lt~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~v~~~lr 117 (119)
T d2pl1a1 45 PDIAIVDLGLPDEDG---LSLIRRWRSNDVSLPILVLTARESWQDKVEVLSAGADDYVTKPFHIEEVMARMQALMR 117 (119)
T ss_dssp CSEEEECSCCSSSCH---HHHHHHHHHTTCCSCEEEEESCCCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHHH
T ss_pred cceeehhccCCCchh---HHHHHHHHhcCcccceEeeeccCCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHc
Confidence 56899983 233332 234445544445677777765443 22344444466678899999999998887654
No 335
>d2huec1 a.22.1.1 (C:20-101) Histone H4 {African clawed frog (Xenopus laevis) [TaxId: 8355]}
Probab=49.94 E-value=11 Score=23.52 Aligned_cols=52 Identities=8% Similarity=-0.086 Sum_probs=33.4
Q ss_pred HHHhcCCC-CCHHHHHHHHHhcCCCHHHHHHHHHHHh--hCCCccchhhhhhhcC
Q 020071 182 VVQEEKVP-YVPEGLEAIIFTADGDMRQALNNLQATY--SGFRFVNQENVFKVCD 233 (331)
Q Consensus 182 ~~~~~~~~-i~~~~~~~l~~~~~g~~r~~~~~l~~~~--~~~~~i~~~~v~~~~~ 233 (331)
+++..|+. +++++.+.+.....--++.+...+...+ ....+++.+||..++.
T Consensus 18 iar~~Gv~ris~d~~~~l~~~l~~~l~~i~~~a~~~~~hakRKTvt~~DV~~Alk 72 (82)
T d2huec1 18 LARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALK 72 (82)
T ss_dssp HHHHTTCCEECTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHTT
T ss_pred HHHHcCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCHHHHHHHHH
Confidence 33345554 7777777777766555555555554443 5677899998876654
No 336
>d1jbea_ c.23.1.1 (A:) CheY protein {Escherichia coli [TaxId: 562]}
Probab=48.52 E-value=24 Score=23.48 Aligned_cols=75 Identities=12% Similarity=0.085 Sum_probs=46.0
Q ss_pred CceEEEEeCCCCCCHHHHHHHHHHHHH--hcCCcEEEEeeCCCC--CCChhhhcccceeeecCCCHHHHHHHHHHHHHhc
Q 020071 111 KHKVVVLDEADSMTAGAQQALRRTMEI--YSNSTRFALACNVSS--KIIEPIQSRCAIVRFSRLSDEEILSRLMVVVQEE 186 (331)
Q Consensus 111 ~~~vviide~d~l~~~~~~~Ll~~le~--~~~~~~~I~~~~~~~--~l~~~l~sr~~~i~~~~~~~~~~~~~l~~~~~~~ 186 (331)
++.+|++|= + |+....-.+++.+.. ...++++|+.|.... .....+..-+..+-.+|++..++.+.+.+..++.
T Consensus 49 ~~dlii~D~-~-mP~~dG~el~~~ir~~~~~~~~piI~lt~~~~~~~~~~a~~~G~~~~l~KP~~~~~L~~~l~~~l~r~ 126 (128)
T d1jbea_ 49 GYGFVISDW-N-MPNMDGLELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKLNKIFEKL 126 (128)
T ss_dssp CCCEEEEES-C-CSSSCHHHHHHHHHC--CCTTCCEEEEESSCCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEec-c-cccCCHHHHHHHHHhCccCCCCcEEEEECcCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHc
Confidence 467888873 1 222223455555543 234677777665432 2334444445667888999999999998887664
Q ss_pred C
Q 020071 187 K 187 (331)
Q Consensus 187 ~ 187 (331)
|
T Consensus 127 ~ 127 (128)
T d1jbea_ 127 G 127 (128)
T ss_dssp T
T ss_pred C
Confidence 4
No 337
>d1wxqa1 c.37.1.8 (A:1-319) GTP-binding protein PH0525 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=48.04 E-value=3.2 Score=33.42 Aligned_cols=21 Identities=29% Similarity=0.352 Sum_probs=17.9
Q ss_pred EEEeCCCCccHHHHHHHHHHH
Q 020071 49 LILAGPPGTGKTTSILALAHE 69 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~ 69 (331)
+=|.|-|.+||||+-.++...
T Consensus 3 v~lvG~pn~GKStlfn~lt~~ 23 (319)
T d1wxqa1 3 IGVVGKPNVGKSTFFSAATLV 23 (319)
T ss_dssp EEEEECTTSSHHHHHHHHHC-
T ss_pred EeEECCCCCCHHHHHHHHHCC
Confidence 568999999999999999764
No 338
>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}
Probab=47.94 E-value=11 Score=24.14 Aligned_cols=25 Identities=20% Similarity=0.217 Sum_probs=21.8
Q ss_pred CCeEEEeCCCCccHHHHHHHHHHHh
Q 020071 46 MPNLILAGPPGTGKTTSILALAHEL 70 (331)
Q Consensus 46 ~~~~ll~G~~G~GKt~la~~l~~~l 70 (331)
..++.|.|=-|+|.+.+|+.+.+.=
T Consensus 8 ~~~ihfiGigG~GMs~LA~~L~~~G 32 (96)
T d1p3da1 8 VQQIHFIGIGGAGMSGIAEILLNEG 32 (96)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHHHT
T ss_pred CCEEEEEEECHHHHHHHHHHHHhCC
Confidence 3469999999999999999998863
No 339
>d1peya_ c.23.1.1 (A:) Sporulation response regulator Spo0F {Bacillus subtilis [TaxId: 1423]}
Probab=47.44 E-value=27 Score=22.87 Aligned_cols=68 Identities=15% Similarity=0.133 Sum_probs=41.9
Q ss_pred ceEEEEeC-CCCCCHHHHHHHHHHHHHhcCCcEEEEeeCCCC--CCChhhhcccceeeecCCCHHHHHHHHHHH
Q 020071 112 HKVVVLDE-ADSMTAGAQQALRRTMEIYSNSTRFALACNVSS--KIIEPIQSRCAIVRFSRLSDEEILSRLMVV 182 (331)
Q Consensus 112 ~~vviide-~d~l~~~~~~~Ll~~le~~~~~~~~I~~~~~~~--~l~~~l~sr~~~i~~~~~~~~~~~~~l~~~ 182 (331)
+.++++|= ...++ .-.+++.+..-++++.+|+.|.... .....+..-+.-+-.+|.+.+++...+++.
T Consensus 46 ~dlillD~~mP~~~---G~el~~~lr~~~~~~pvi~lt~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~v~~~ 116 (119)
T d1peya_ 46 PDLVLLDMKIPGMD---GIEILKRMKVIDENIRVIIMTAYGELDMIQESKELGALTHFAKPFDIDEIRDAVKKY 116 (119)
T ss_dssp CSEEEEESCCTTCC---HHHHHHHHHHHCTTCEEEEEESSCCHHHHHHHHHTTCCEEEESSCCHHHHHHHHHHH
T ss_pred CCEEEEeccCCCCC---HHHHHHHHHHhCCCCcEEEEecCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHH
Confidence 46899983 22232 2344445554456778877765432 223444444566778999999999888764
No 340
>d1kk1a3 c.37.1.8 (A:6-200) Initiation factor eIF2 gamma subunit, N-terminal (G) domain {Archaeon Pyrococcus abyssi [TaxId: 29292]}
Probab=46.42 E-value=46 Score=23.75 Aligned_cols=20 Identities=35% Similarity=0.340 Sum_probs=18.2
Q ss_pred EEEeCCCCccHHHHHHHHHH
Q 020071 49 LILAGPPGTGKTTSILALAH 68 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~ 68 (331)
+-+.|-...||||++.++..
T Consensus 8 IaiiGhvd~GKSTL~~~L~g 27 (195)
T d1kk1a3 8 IGMVGHVDHGKTTLTKALTG 27 (195)
T ss_dssp EEEECSTTSSHHHHHHHHHT
T ss_pred EEEEeccCCcHHHHHHHHHh
Confidence 68999999999999999964
No 341
>d1fada_ a.77.1.2 (A:) FADD (Mort1) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=45.04 E-value=32 Score=21.52 Aligned_cols=49 Identities=6% Similarity=0.055 Sum_probs=31.7
Q ss_pred CCCHHHHHHHHHHHHHh---------cCCCCCHHHHHHHHHhcCCCH-HHHHHHHHHHh
Q 020071 169 RLSDEEILSRLMVVVQE---------EKVPYVPEGLEAIIFTADGDM-RQALNNLQATY 217 (331)
Q Consensus 169 ~~~~~~~~~~l~~~~~~---------~~~~i~~~~~~~l~~~~~g~~-r~~~~~l~~~~ 217 (331)
||.+.++...+..+++. ..+.+++..++.|.....+|. ..+..+|..+.
T Consensus 3 ~p~~~~l~~~f~~ia~~lg~~Wk~Lar~Lgls~~~I~~I~~~~~~~~~e~~~~mL~~W~ 61 (95)
T d1fada_ 3 PPGEAYLQVAFDIVCDNVGRDWKRLARELKVSEAKMDGIEEKYPRSLSERVRESLKVWK 61 (95)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHCSSCHHHHHHHHHHHHH
T ss_pred CccHhhHHHHHHHHHHHHHHhHHHHHHHcCCCHHHHHHHHHHCCCCHHHHHHHHHHHHH
Confidence 55565565555444432 134578888888887777776 56677777664
No 342
>d1vg5a_ a.5.2.1 (A:) Rhomboid family protein At3g58460 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=44.12 E-value=22 Score=21.43 Aligned_cols=25 Identities=24% Similarity=0.317 Sum_probs=22.2
Q ss_pred CCCHHHHHHHHHhcCCCHHHHHHHH
Q 020071 189 PYVPEGLEAIIFTADGDMRQALNNL 213 (331)
Q Consensus 189 ~i~~~~~~~l~~~~~g~~r~~~~~l 213 (331)
.++++.+....+.++||+..+++.|
T Consensus 40 GF~~~~a~~AL~~~~~n~e~A~~~L 64 (73)
T d1vg5a_ 40 GFDRTQVEVALAAADDDLTVAVEIL 64 (73)
T ss_dssp TCCHHHHHHHHHHHTSCHHHHHHHH
T ss_pred CCCHHHHHHHHHHhCCCHHHHHHHH
Confidence 5788888888899999999999987
No 343
>d1wgla_ a.5.2.4 (A:) Toll-interacting protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=42.43 E-value=13 Score=21.51 Aligned_cols=39 Identities=18% Similarity=0.198 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHhcCCCCCHHHHHHHHHhcCCCHHHHHHHHHHH
Q 020071 174 EILSRLMVVVQEEKVPYVPEGLEAIIFTADGDMRQALNNLQAT 216 (331)
Q Consensus 174 ~~~~~l~~~~~~~~~~i~~~~~~~l~~~~~g~~r~~~~~l~~~ 216 (331)
+..+.|+..+ -.++++.++.+.+.++|++..+++.|-..
T Consensus 11 e~i~~LkeMF----P~~D~~vI~~VL~a~~G~vd~aid~LL~M 49 (59)
T d1wgla_ 11 EDLKAIQDMF----PNMDQEVIRSVLEAQRGNKDAAINSLLQM 49 (59)
T ss_dssp HHHHHHHHHC----SSSCHHHHHHHHTTTTTCHHHHHHHHHHS
T ss_pred HHHHHHHHHC----CCCCHHHHHHHHHHcCCCHHHHHHHHHhc
Confidence 3344555543 25899999999999999999999988654
No 344
>d1jala1 c.37.1.8 (A:1-278) YchF GTP-binding protein N-terminal domain {Haemophilus influenzae [TaxId: 727]}
Probab=39.66 E-value=8.1 Score=30.24 Aligned_cols=21 Identities=33% Similarity=0.422 Sum_probs=18.8
Q ss_pred EEEeCCCCccHHHHHHHHHHH
Q 020071 49 LILAGPPGTGKTTSILALAHE 69 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~ 69 (331)
+=|.|-|.+||||+-.++.+.
T Consensus 5 ~GivG~Pn~GKSTlf~~lt~~ 25 (278)
T d1jala1 5 CGIVGLPNVGKSTLFNALTKA 25 (278)
T ss_dssp EEEECCTTSSHHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHHCC
Confidence 568999999999999999875
No 345
>d1yioa2 c.23.1.1 (A:3-130) Response regulatory protein StyR, N-terminal domain {Pseudomonas fluorescens [TaxId: 294]}
Probab=39.01 E-value=48 Score=21.82 Aligned_cols=73 Identities=12% Similarity=0.164 Sum_probs=42.7
Q ss_pred CCceEEEEeCCCCCCHHHHHHHHHHHHHhcCCcEEEEeeCC--CCCCChhhhcccceeeecCCCHHHHHHHHHHHHH
Q 020071 110 GKHKVVVLDEADSMTAGAQQALRRTMEIYSNSTRFALACNV--SSKIIEPIQSRCAIVRFSRLSDEEILSRLMVVVQ 184 (331)
Q Consensus 110 ~~~~vviide~d~l~~~~~~~Ll~~le~~~~~~~~I~~~~~--~~~l~~~l~sr~~~i~~~~~~~~~~~~~l~~~~~ 184 (331)
..+.+|++|- .|+....-.+++.+...++.+.+|++|.. .......+..=+.-+-.+|++.+++...+++..+
T Consensus 45 ~~~dliilD~--~mp~~~G~~~~~~i~~~~~~~~ii~lt~~~~~~~~~~a~~~Ga~dyl~KP~~~~~L~~~i~~~l~ 119 (128)
T d1yioa2 45 EQHGCLVLDM--RMPGMSGIELQEQLTAISDGIPIVFITAHGDIPMTVRAMKAGAIEFLPKPFEEQALLDAIEQGLQ 119 (128)
T ss_dssp TSCEEEEEES--CCSSSCHHHHHHHHHHTTCCCCEEEEESCTTSCCCHHHHHTTEEEEEESSCCHHHHHHHHHHHHH
T ss_pred cCCCEeehhh--hcccchhHHHHHHHHhhCCCCeEEEEEEECCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHH
Confidence 4467999984 23322223344444443444555555433 2334455555466788899999999988877553
No 346
>d2axpa1 c.37.1.1 (A:2-165) Hypothetical protein YorR {Bacillus subtilis [TaxId: 1423]}
Probab=38.71 E-value=24 Score=22.98 Aligned_cols=28 Identities=32% Similarity=0.487 Sum_probs=24.1
Q ss_pred EEEeCCCCccHHHHHHHHHHHhcCCCCCCceEE
Q 020071 49 LILAGPPGTGKTTSILALAHELLGPNYREAVME 81 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l~~~~~~~~~~~ 81 (331)
+++.||.-+-|++.|..+.+++ ..+++.
T Consensus 3 iilegpdccfkstvaaklskel-----kypiik 30 (164)
T d2axpa1 3 IILEGPDCCFKSTVAAKLSKEL-----KYPIIK 30 (164)
T ss_dssp EEEECCSSSCHHHHHHHHHHHH-----TCCEEE
T ss_pred EEEeCCchhhHHHHHHHHHhhh-----cCceec
Confidence 6899999999999999999999 555553
No 347
>d1zesa1 c.23.1.1 (A:3-123) PhoB receiver domain {Escherichia coli [TaxId: 562]}
Probab=38.39 E-value=43 Score=21.84 Aligned_cols=71 Identities=8% Similarity=0.123 Sum_probs=44.4
Q ss_pred CceEEEEeC-CCCCCHHHHHHHHHHHHH--hcCCcEEEEeeCCCC--CCChhhhcccceeeecCCCHHHHHHHHHHHHH
Q 020071 111 KHKVVVLDE-ADSMTAGAQQALRRTMEI--YSNSTRFALACNVSS--KIIEPIQSRCAIVRFSRLSDEEILSRLMVVVQ 184 (331)
Q Consensus 111 ~~~vviide-~d~l~~~~~~~Ll~~le~--~~~~~~~I~~~~~~~--~l~~~l~sr~~~i~~~~~~~~~~~~~l~~~~~ 184 (331)
.+.++++|- ...++ .-.+.+.+.. ...++++|+.|.... .....+..-+.-+-.+|++.+++...++...+
T Consensus 44 ~~dlil~D~~mp~~~---G~~l~~~lr~~~~~~~~pvi~lt~~~~~~~~~~~~~~G~~d~l~KP~~~~~L~~~v~~~lr 119 (121)
T d1zesa1 44 WPDLILLDWMLPGGS---GIQFIKHLKRESMTRDIPVVMLTARGEEEDRVRGLETGADDYITKPFSPKELVARIKAVMR 119 (121)
T ss_dssp CCSEEEECSSCTTSC---HHHHHHHHHHSTTTTTSCEEEEESCCSHHHHHHHHHHTCSEEEESSCCHHHHHHHHHHHHH
T ss_pred CCCEEEeecCCCCCC---HHHHHHHHHhCccCCCCeEEEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHc
Confidence 467999984 33333 3345555543 234677777665432 22344444566788999999999998887654
No 348
>d1htaa_ a.22.1.2 (A:) Archaeal histone {Archaeon Methanothermus fervidus, histone A [TaxId: 2180]}
Probab=35.63 E-value=38 Score=19.67 Aligned_cols=60 Identities=8% Similarity=-0.064 Sum_probs=38.6
Q ss_pred CCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHhcCCCHHHHHHHHHHHh--hCCCccchhhhhhhc
Q 020071 170 LSDEEILSRLMVVVQEEKVPYVPEGLEAIIFTADGDMRQALNNLQATY--SGFRFVNQENVFKVC 232 (331)
Q Consensus 170 ~~~~~~~~~l~~~~~~~~~~i~~~~~~~l~~~~~g~~r~~~~~l~~~~--~~~~~i~~~~v~~~~ 232 (331)
++..-+..+++.- ....++.++...+.+.+.--+..+.......+ .+.++|+.+||...+
T Consensus 4 LP~a~I~ri~k~~---~~~ris~ea~~~l~~~~e~fi~~l~~~a~~~a~~~kRkTi~~~DV~~Al 65 (68)
T d1htaa_ 4 LPIAPIGRIIKNA---GAERVSDDARIALAKVLEEMGEEIASEAVKLAKHAGRKTIKAEDIELAR 65 (68)
T ss_dssp SCHHHHHHHHHHT---TCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHH
T ss_pred CcHHHHHHHHHHC---CcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCHHHHHHHH
Confidence 4444555555431 23458999998888887666665555554443 577889999887643
No 349
>d1mvoa_ c.23.1.1 (A:) PhoP receiver domain {Bacillus subtilis [TaxId: 1423]}
Probab=35.00 E-value=54 Score=21.26 Aligned_cols=70 Identities=9% Similarity=0.093 Sum_probs=39.5
Q ss_pred ceEEEEeC-CCCCCHHHHHHHHHHHHHhcCCcEEEEeeCC-CC-CCChhhhcccceeeecCCCHHHHHHHHHHHHH
Q 020071 112 HKVVVLDE-ADSMTAGAQQALRRTMEIYSNSTRFALACNV-SS-KIIEPIQSRCAIVRFSRLSDEEILSRLMVVVQ 184 (331)
Q Consensus 112 ~~vviide-~d~l~~~~~~~Ll~~le~~~~~~~~I~~~~~-~~-~l~~~l~sr~~~i~~~~~~~~~~~~~l~~~~~ 184 (331)
+.+|++|= ...++ ..+ +.+.+...+....+|+.+.. .. .....+..-+.-+-.+|++.+++...++...+
T Consensus 47 ~dlillD~~mp~~~--G~~-~~~~~r~~~~~~~ii~lt~~~~~~~~~~~~~~Ga~~yl~KP~~~~~L~~~i~~~lr 119 (121)
T d1mvoa_ 47 PDLIVLDVMLPKLD--GIE-VCKQLRQQKLMFPILMLTAKDEEFDKVLGLELGADDYMTKPFSPREVNARVKAILR 119 (121)
T ss_dssp CSEEEEESSCSSSC--HHH-HHHHHHHTTCCCCEEEEECTTCCCCHHHHHHTTCCEEEESSCCHHHHHHHHHHHHH
T ss_pred ccEEEecccccCCC--Cch-hhhhhhccCCCCEEEEEEeeCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHc
Confidence 55888883 22222 223 33333333344555554433 22 22344444456688999999999999887664
No 350
>d1wgna_ a.5.2.1 (A:) Ubiquitin-associated protein 1, UBAP1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.94 E-value=25 Score=20.42 Aligned_cols=26 Identities=19% Similarity=0.165 Sum_probs=21.6
Q ss_pred CCCHHHHHHHHHhcCCCHHHHHHHHH
Q 020071 189 PYVPEGLEAIIFTADGDMRQALNNLQ 214 (331)
Q Consensus 189 ~i~~~~~~~l~~~~~g~~r~~~~~l~ 214 (331)
.++++.+....+.+++|+..+++.|=
T Consensus 30 GF~~~~a~~AL~~~~~n~e~A~~~Ll 55 (63)
T d1wgna_ 30 GYSYECVLRAMKKKGENIEQILDYLF 55 (63)
T ss_dssp HCCHHHHHHHHHHHCSCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHcCCCHHHHHHHHH
Confidence 47888888888889999999998874
No 351
>d1vdma1 c.61.1.1 (A:1-153) Pprobable purine phosphoribosyltransferase PH0095 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=33.47 E-value=48 Score=22.77 Aligned_cols=98 Identities=15% Similarity=0.157 Sum_probs=47.3
Q ss_pred HHHHHHHHHHcCCCCeEEEeCCCCccHHHHHHHHHHHhcCCCCCCceEEeecCCCCChHhHHHHHHHHHhcccCCCCCCc
Q 020071 33 AVARLGIIARDGNMPNLILAGPPGTGKTTSILALAHELLGPNYREAVMELNASDDRGIDVVRNKIKMFAQKKVTLPPGKH 112 (331)
Q Consensus 33 ~~~~l~~~l~~~~~~~~ll~G~~G~GKt~la~~l~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~ 112 (331)
...+|...+...+.. ++.|...-| -.+|..+++.+... ...++.+..... .+...+. . ....+......++
T Consensus 14 ~i~~la~~i~~~~~d--~IVgI~~gG-~~~A~~la~~L~~~--~~~~~~~~~y~~--~~~~~~~-~-~~~~~~~~~~~gk 84 (153)
T d1vdma1 14 AIFALAEKLREYKPD--VIIGVARGG-LIPAVRLSHILGDI--PLKVIDVKFYKG--IDERGEK-P-VITIPIHGDLKDK 84 (153)
T ss_dssp HHHHHHHHHHHHCCS--EEEEETTTT-HHHHHHHHHHTTSC--CEEEEEEECCCC----CCCSS-C-EEEECCCSCCBTC
T ss_pred HHHHHHHHHHccCCC--EEEEECCCc-chhHHHHHHHhCCC--ceEEEEEeeccc--ccccCCc-c-eeecccccccCCC
Confidence 344555556554433 566877656 56688888888311 122222221111 0000000 0 0001111112468
Q ss_pred eEEEEeCCCCCCHHHHHHHHHHHHHhcC
Q 020071 113 KVVVLDEADSMTAGAQQALRRTMEIYSN 140 (331)
Q Consensus 113 ~vviide~d~l~~~~~~~Ll~~le~~~~ 140 (331)
+|+||||+-.-. .......+.+.+.++
T Consensus 85 ~VLIVDDii~TG-~Tl~~~~~~l~~~g~ 111 (153)
T d1vdma1 85 RVVIVDDVSDTG-KTLEVVIEEVKKLGA 111 (153)
T ss_dssp EEEEEEEEESSC-HHHHHHHHHHHTTTB
T ss_pred EEEEEeeeeccC-CcHHHHHHHHHhcCC
Confidence 999999986544 456666666665443
No 352
>d1f60a3 c.37.1.8 (A:2-240) Elongation factor eEF-1alpha, N-terminal (G) domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=33.47 E-value=14 Score=28.18 Aligned_cols=22 Identities=23% Similarity=0.326 Sum_probs=19.4
Q ss_pred EEEeCCCCccHHHHHHHHHHHh
Q 020071 49 LILAGPPGTGKTTSILALAHEL 70 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l 70 (331)
+.+.|-.+.||||++..+.-..
T Consensus 9 i~iiGHvD~GKsTl~~~ll~~~ 30 (239)
T d1f60a3 9 VVVIGHVDSGKSTTTGHLIYKC 30 (239)
T ss_dssp EEEEECTTSCHHHHHHHHHHHH
T ss_pred EEEEeCCCCCHHHHHHHHHHHc
Confidence 7999999999999999997544
No 353
>g1xew.1 c.37.1.12 (X:,Y:) Smc head domain {Pyrococcus furiosus [TaxId: 2261]}
Probab=33.16 E-value=29 Score=27.18 Aligned_cols=42 Identities=12% Similarity=0.168 Sum_probs=34.0
Q ss_pred CCceEEEEeCCC-CCCHHHHHHHHHHHHHhcCCcEEEEeeCCC
Q 020071 110 GKHKVVVLDEAD-SMTAGAQQALRRTMEIYSNSTRFALACNVS 151 (331)
Q Consensus 110 ~~~~vviide~d-~l~~~~~~~Ll~~le~~~~~~~~I~~~~~~ 151 (331)
....++++||++ .+++..+..+.+.+++...++.+|++|.++
T Consensus 245 ~~~~~~~ide~e~~L~~~~~~~l~~~l~~~~~~~Q~iitTh~~ 287 (329)
T g1xew.1 245 KPAPFYLFDEIDAHLDDANVKRVADLIKESSKESQFIVITLRD 287 (329)
T ss_dssp SCCSEEEEESTTTTSCHHHHHHHHHHHHHHTTTSEEEEECCCH
T ss_pred cccchhhhhhHHhhcCHHHHHHHHHHHHHhccCCeEEEEeCCH
Confidence 346799999986 457777888999999888889999988664
No 354
>d1p6qa_ c.23.1.1 (A:) CheY protein {Sinorhizobium meliloti, CheY2 [TaxId: 382]}
Probab=32.15 E-value=34 Score=22.70 Aligned_cols=70 Identities=13% Similarity=0.153 Sum_probs=43.6
Q ss_pred ceEEEEe-CCCCCCHHHHHHHHHHHHH--hcCCcEEEEeeCCCC--CCChhhhcccceeeecCCCHHHHHHHHHHHHH
Q 020071 112 HKVVVLD-EADSMTAGAQQALRRTMEI--YSNSTRFALACNVSS--KIIEPIQSRCAIVRFSRLSDEEILSRLMVVVQ 184 (331)
Q Consensus 112 ~~vviid-e~d~l~~~~~~~Ll~~le~--~~~~~~~I~~~~~~~--~l~~~l~sr~~~i~~~~~~~~~~~~~l~~~~~ 184 (331)
+.++|+| +...++ .-.+.+.+.. ...++.+|+.|.... .....+..-+.-+-.+|++.+++...+++.++
T Consensus 52 ~dlii~D~~mP~~~---G~el~~~lr~~~~~~~~pii~lt~~~~~~~~~~a~~~G~~~~l~KP~~~~~L~~~i~~vl~ 126 (129)
T d1p6qa_ 52 HHLVISDFNMPKMD---GLGLLQAVRANPATKKAAFIILTAQGDRALVQKAAALGANNVLAKPFTIEKMKAAIEAVFG 126 (129)
T ss_dssp CSEEEECSSSCSSC---HHHHHHHHTTCTTSTTCEEEECCSCCCHHHHHHHHHHTCSCEECCCSSHHHHHHHHHHHHH
T ss_pred CCeEEeeeecCCCC---hHHHHHHHHhCcccCCCeEEEEEecCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHH
Confidence 5688888 333333 3456666653 235677777765432 12233333355678899999999999988764
No 355
>d2r25b1 c.23.1.1 (B:1087-1214) Response regulator Sin1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=32.11 E-value=51 Score=21.79 Aligned_cols=71 Identities=7% Similarity=0.046 Sum_probs=42.6
Q ss_pred CceEEEEeC-CCCCCHHHHHHHHHHH-HHhcCCcEEEEeeCCCC--CCChhhhcccceeeecCCCHHHHHHHHHHHHH
Q 020071 111 KHKVVVLDE-ADSMTAGAQQALRRTM-EIYSNSTRFALACNVSS--KIIEPIQSRCAIVRFSRLSDEEILSRLMVVVQ 184 (331)
Q Consensus 111 ~~~vviide-~d~l~~~~~~~Ll~~l-e~~~~~~~~I~~~~~~~--~l~~~l~sr~~~i~~~~~~~~~~~~~l~~~~~ 184 (331)
++.++++|= ...++. -.+.+.+ ++++..+++|+.|.... .....+..-+.-+-.+|++.+++.+.+++.+.
T Consensus 51 ~~dlillD~~mP~~dG---~el~~~ir~~~~~~~piI~lT~~~~~~~~~~~~~~G~~~~l~KP~~~~~L~~~l~~~~~ 125 (128)
T d2r25b1 51 NYNMIFMDVQMPKVDG---LLSTKMIRRDLGYTSPIVALTAFADDSNIKECLESGMNGFLSKPIKRPKLKTILTEFCA 125 (128)
T ss_dssp CCSEEEECSCCSSSCH---HHHHHHHHHHSCCCSCEEEEESCCSHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHCT
T ss_pred CCCEEEEEeCCCCCCH---HHHHHHHHHccCCCCeEEEEECCCCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHH
Confidence 467999983 333332 2233333 45555666666554432 22233433456688899999999999988654
No 356
>d1r5ba3 c.37.1.8 (A:215-459) Eukaryotic peptide chain release factor ERF2, G domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=31.33 E-value=12 Score=28.58 Aligned_cols=22 Identities=18% Similarity=0.175 Sum_probs=19.0
Q ss_pred EEEeCCCCccHHHHHHHHHHHh
Q 020071 49 LILAGPPGTGKTTSILALAHEL 70 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l 70 (331)
+.+.|-.+.||||++..+....
T Consensus 27 i~iiGHVD~GKSTL~~~Ll~~~ 48 (245)
T d1r5ba3 27 IVFIGHVDAGKSTLGGNILFLT 48 (245)
T ss_dssp EEEEECGGGTHHHHHHHHHHHT
T ss_pred EEEEeeCCCCHHHHHHHHHHHc
Confidence 7888999999999999996543
No 357
>d1ns5a_ c.116.1.3 (A:) Hypothetical protein YbeA {Escherichia coli [TaxId: 562]}
Probab=31.08 E-value=75 Score=21.76 Aligned_cols=59 Identities=10% Similarity=0.088 Sum_probs=37.0
Q ss_pred ceEEEEeCC-CCCCHHHHHHHHHHHHHhcCCcEEEEeeCCCCCCChhhhccc-ceeeecCCCH
Q 020071 112 HKVVVLDEA-DSMTAGAQQALRRTMEIYSNSTRFALACNVSSKIIEPIQSRC-AIVRFSRLSD 172 (331)
Q Consensus 112 ~~vviide~-d~l~~~~~~~Ll~~le~~~~~~~~I~~~~~~~~l~~~l~sr~-~~i~~~~~~~ 172 (331)
..+|++||= ..++......+++-......++.||+- .+..+.+.++.|+ ..+.|.+++-
T Consensus 67 ~~~I~LDe~Gk~~sS~~fA~~l~~~~~~g~~i~fiIG--Ga~G~~~~~~~~a~~~lsls~mT~ 127 (153)
T d1ns5a_ 67 NRIVTLDIPGKPWDTPQLAAELERWKLDGRDVSLLIG--GPEGLSPACKAAAEQSWSLSALTL 127 (153)
T ss_dssp SEEEEEEEEEECCCHHHHHHHHHHHHHHCSCEEEEEC--BTTBCCHHHHHHCSEEECCCSSCC
T ss_pred CeEEEeeccccccChHHHHHHHHHHhhccCcEEEEEE--cCCCCCHHHHHhhCcEEecccCCc
Confidence 358999984 344554444444333333455655543 4567888999997 4578888874
No 358
>d1xhfa1 c.23.1.1 (A:2-122) Aerobic respiration control protein ArcA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=30.89 E-value=47 Score=21.65 Aligned_cols=69 Identities=10% Similarity=0.094 Sum_probs=42.4
Q ss_pred ceEEEEe-CCCCCCHHHHHHHHHHHHHhcCCcEEEEeeCCCC--CCChhhhcccceeeecCCCHHHHHHHHHHHHH
Q 020071 112 HKVVVLD-EADSMTAGAQQALRRTMEIYSNSTRFALACNVSS--KIIEPIQSRCAIVRFSRLSDEEILSRLMVVVQ 184 (331)
Q Consensus 112 ~~vviid-e~d~l~~~~~~~Ll~~le~~~~~~~~I~~~~~~~--~l~~~l~sr~~~i~~~~~~~~~~~~~l~~~~~ 184 (331)
+.+|++| +...++. -.+.+.+.+.+ ++.+|+.+.... .....+..-+.-+-.+|++.+++...++...+
T Consensus 47 ~dlii~D~~mp~~~G---~~~~~~~r~~~-~~pii~lt~~~~~~~~~~a~~~Ga~dyl~KP~~~~~L~~~v~~~l~ 118 (121)
T d1xhfa1 47 INLVIMDINLPGKNG---LLLARELREQA-NVALMFLTGRDNEVDKILGLEIGADDYITKPFNPRELTIRARNLLS 118 (121)
T ss_dssp CSEEEECSSCSSSCH---HHHHHHHHHHC-CCEEEEEESCCSHHHHHHHHHHTCSEEEESSCCHHHHHHHHHHHHH
T ss_pred CCEEEeecccCCccC---cHHHHHHHhcC-CCcEEEEECCCCHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHh
Confidence 5699998 2233332 34455555433 577777665432 22344444466788999999999998887654
No 359
>d1wiva_ a.5.2.1 (A:) Ubiquitin isopeptidase T {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=30.87 E-value=50 Score=19.66 Aligned_cols=40 Identities=10% Similarity=0.181 Sum_probs=29.0
Q ss_pred CCCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHhcCCCHHHHHHHHHH
Q 020071 169 RLSDEEILSRLMVVVQEEKVPYVPEGLEAIIFTADGDMRQALNNLQA 215 (331)
Q Consensus 169 ~~~~~~~~~~l~~~~~~~~~~i~~~~~~~l~~~~~g~~r~~~~~l~~ 215 (331)
+++++.+..++.- .++++.+....+.+++|+..+++.|-.
T Consensus 27 ~~d~~~i~~L~~M-------GF~~~~a~~AL~~~~~n~e~Av~~Lls 66 (73)
T d1wiva_ 27 DIDQSSVDTLLSF-------GFAEDVARKALKASGGDIEKATDWVFN 66 (73)
T ss_dssp SSCHHHHHHHHHH-------TCCHHHHHHHHHHTTSCHHHHHHHHHH
T ss_pred CCCHHHHHHHHhc-------CCCHHHHHHHHHHcCCCHHHHHHHHHc
Confidence 3555555444432 478888888889999999999988743
No 360
>d2a9pa1 c.23.1.1 (A:2-118) DNA-binding response regulator MicA, N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]}
Probab=30.86 E-value=30 Score=22.56 Aligned_cols=70 Identities=13% Similarity=0.153 Sum_probs=40.6
Q ss_pred ceEEEEeCCCCCCHHHHHHHHHHHHHhcCCcEEEEeeCCCC--CCChhhhcccceeeecCCCHHHHHHHHHHHHH
Q 020071 112 HKVVVLDEADSMTAGAQQALRRTMEIYSNSTRFALACNVSS--KIIEPIQSRCAIVRFSRLSDEEILSRLMVVVQ 184 (331)
Q Consensus 112 ~~vviide~d~l~~~~~~~Ll~~le~~~~~~~~I~~~~~~~--~l~~~l~sr~~~i~~~~~~~~~~~~~l~~~~~ 184 (331)
+.++++|= .++....-.+++.+.+.+ ++++|+.+.... .....+..-+.-+-.+|++.+++...++...+
T Consensus 45 ~dlillD~--~mp~~~G~~~~~~i~~~~-~~pvI~lt~~~~~~~~~~a~~~Ga~d~l~KP~~~~~L~~~i~~~lr 116 (117)
T d2a9pa1 45 PDIIILDL--MLPEIDGLEVAKTIRKTS-SVPILMLSAKDSEFDKVIGLELGADDYVTKPFSNRELQARVKALLR 116 (117)
T ss_dssp CSEEEECS--SCSSSCHHHHHHHHHTTC-CCCEEEEESCCSHHHHHHHHHHTCSEEEESSCCHHHHHHHHHHHHH
T ss_pred CCEEEecc--ccCCCCccHHHHHHHhCC-CCCEEEEecCCCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHhC
Confidence 45889883 233222233444444433 466666655432 12233444456678889999999998877653
No 361
>d1mn3a_ a.5.2.4 (A:) Vacuolar protein sorting-associated protein vps9 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=30.60 E-value=42 Score=18.74 Aligned_cols=27 Identities=11% Similarity=0.247 Sum_probs=23.9
Q ss_pred CCCHHHHHHHHHhcCCCHHHHHHHHHH
Q 020071 189 PYVPEGLEAIIFTADGDMRQALNNLQA 215 (331)
Q Consensus 189 ~i~~~~~~~l~~~~~g~~r~~~~~l~~ 215 (331)
.++.+.++.+...++|+...+++.|-.
T Consensus 25 ~~D~~VI~~VL~a~~G~vd~aidaLL~ 51 (54)
T d1mn3a_ 25 DMDPSLIEDVCIAKKSRIEPCVDALLS 51 (54)
T ss_dssp TSCHHHHHHHHSCSSCSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHcCCCHHHHHHHHHh
Confidence 689999999999999999999988743
No 362
>d1ufra_ c.61.1.1 (A:) Pyrimidine operon regulator PyrR {Thermus thermophilus [TaxId: 274]}
Probab=30.41 E-value=76 Score=22.36 Aligned_cols=28 Identities=11% Similarity=0.029 Sum_probs=18.3
Q ss_pred CCCceEEEEeCCCCCCHHHHHHHHHHHHH
Q 020071 109 PGKHKVVVLDEADSMTAGAQQALRRTMEI 137 (331)
Q Consensus 109 ~~~~~vviide~d~l~~~~~~~Ll~~le~ 137 (331)
-.++.|++|||+=.-. .....+.+.+..
T Consensus 94 i~gk~VLiVDDIlDTG-~TL~~~~~~l~~ 121 (178)
T d1ufra_ 94 LTGKAIVLVDDVLYTG-RTARAALDALID 121 (178)
T ss_dssp CTTCEEEEEEEEESSS-HHHHHHHHHHHH
T ss_pred cCCCeEEEEEcccCcc-hHHHHHHHHHhh
Confidence 4578999999975533 345555555543
No 363
>d1mb3a_ c.23.1.1 (A:) Cell division response regulator DivK {Caulobacter crescentus [TaxId: 155892]}
Probab=30.35 E-value=60 Score=21.06 Aligned_cols=71 Identities=6% Similarity=0.047 Sum_probs=40.6
Q ss_pred ceEEEEeCCCCCCHHHHHHHHHHHHHhc--CCcEEEEeeCCCC--CCChhhhcccceeeecCCCHHHHHHHHHHHHH
Q 020071 112 HKVVVLDEADSMTAGAQQALRRTMEIYS--NSTRFALACNVSS--KIIEPIQSRCAIVRFSRLSDEEILSRLMVVVQ 184 (331)
Q Consensus 112 ~~vviide~d~l~~~~~~~Ll~~le~~~--~~~~~I~~~~~~~--~l~~~l~sr~~~i~~~~~~~~~~~~~l~~~~~ 184 (331)
+.+|++|- .|+.-..-.+.+.+...+ .++.+|+.+.... .....+..-+.-+-.+|++.+++.+.+++.++
T Consensus 46 ~dlil~D~--~mp~~dG~el~~~ir~~~~~~~iPii~lt~~~~~~~~~~~~~~G~~~~l~KP~~~~~L~~~i~~~l~ 120 (123)
T d1mb3a_ 46 PDLILMDI--QLPEISGLEVTKWLKEDDDLAHIPVVAVTAFAMKGDEERIREGGCEAYISKPISVVHFLETIKRLLE 120 (123)
T ss_dssp CSEEEEES--BCSSSBHHHHHHHHHHSTTTTTSCEEEEC------CHHHHHHHTCSEEECSSCCHHHHHHHHHHHHS
T ss_pred CCEEEEEe--ccCCCcHHHHHHHHHhCCCcCCCCeEEEEEecCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHh
Confidence 45889983 222222334555554332 4566666654432 22233333466678889999999999887764
No 364
>d2ayxa1 c.23.1.1 (A:817-949) Sensor kinase protein RcsC, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=30.34 E-value=27 Score=23.46 Aligned_cols=70 Identities=10% Similarity=0.018 Sum_probs=39.5
Q ss_pred ceEEEEeC-CCCCCHHHHHHHHHHHHHhcCCcEEEEeeCCC--CCCChhhhcccceeeecCCCHHHHHHHHHHHHH
Q 020071 112 HKVVVLDE-ADSMTAGAQQALRRTMEIYSNSTRFALACNVS--SKIIEPIQSRCAIVRFSRLSDEEILSRLMVVVQ 184 (331)
Q Consensus 112 ~~vviide-~d~l~~~~~~~Ll~~le~~~~~~~~I~~~~~~--~~l~~~l~sr~~~i~~~~~~~~~~~~~l~~~~~ 184 (331)
+.+|++|= ...++ .-.+.+.+.+.+.++.+|+.|... ......+..-+.-+-.+|++.+++...+...++
T Consensus 53 ~dlillD~~mP~~d---G~el~~~ir~~~~~~pii~lt~~~~~~~~~~~~~~G~~~~l~KP~~~~~L~~~l~~~~~ 125 (133)
T d2ayxa1 53 IDIVLSDVNMPNMD---GYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTLDVIKQTLTLYAE 125 (133)
T ss_dssp CSEEEEEESSCSSC---CHHHHHHHHHHHCCSCEEEEESSTTSHHHHHHHHCCCEEEEESSCCHHHHHHHHHHHHH
T ss_pred ceEEEEeccCCCCC---HHHHHHHHHHhCCCCCEEEEeccCCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHH
Confidence 56999984 22222 122333343334456666655432 222333433355678889999999888876553
No 365
>d1zh2a1 c.23.1.1 (A:2-120) Transcriptional regulatory protein KdpE, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=29.89 E-value=35 Score=22.24 Aligned_cols=71 Identities=15% Similarity=0.211 Sum_probs=41.5
Q ss_pred ceEEEEeCCCCCCHHHHHHHHHHHHHhcCCcEEEEeeCCCC--CCChhhhcccceeeecCCCHHHHHHHHHHHHHh
Q 020071 112 HKVVVLDEADSMTAGAQQALRRTMEIYSNSTRFALACNVSS--KIIEPIQSRCAIVRFSRLSDEEILSRLMVVVQE 185 (331)
Q Consensus 112 ~~vviide~d~l~~~~~~~Ll~~le~~~~~~~~I~~~~~~~--~l~~~l~sr~~~i~~~~~~~~~~~~~l~~~~~~ 185 (331)
+.+|++|-- |+....-.+.+.+.+.+. .++|+.+.... .....+..-+.-+-.+|++.+++...++...++
T Consensus 45 ~dliilD~~--mP~~~G~e~~~~ir~~~~-~piI~lt~~~~~~~~~~a~~~Ga~dyl~KP~~~~~L~~~i~~~lrr 117 (119)
T d1zh2a1 45 PDLIILDLG--LPDGDGIEFIRDLRQWSA-VPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRR 117 (119)
T ss_dssp CSEEEEESE--ETTEEHHHHHHHHHTTCC-CCEEEEESCCSHHHHHHHHHHTCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred CCEEEeccc--cCCCCCchHHHHHHhccC-CcEEEEeccCCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHhh
Confidence 458898841 222222334444544333 44555544332 233445555677888999999999998877654
No 366
>d2vgna2 c.55.4.2 (A:136-277) Dom34 {Saccharomyces cerevisiae [TaxId: 4932]}
Probab=29.12 E-value=78 Score=21.51 Aligned_cols=26 Identities=15% Similarity=0.209 Sum_probs=17.9
Q ss_pred CCCCeEEEeCCCCccHHHHHHHHHHHh
Q 020071 44 GNMPNLILAGPPGTGKTTSILALAHEL 70 (331)
Q Consensus 44 ~~~~~~ll~G~~G~GKt~la~~l~~~l 70 (331)
..+..+++.| ||.-|..+...+....
T Consensus 71 ~~~k~iIiaG-PGf~K~~F~~yl~~~~ 96 (142)
T d2vgna2 71 DKLKTIILCS-PGFYAKILMDKIFQYA 96 (142)
T ss_dssp TTCSEEEEEE-STTHHHHHHHHHHHHH
T ss_pred ccccEEEEeC-CHHHHHHHHHHHHHHh
Confidence 3443345555 6999999998887765
No 367
>d2vvpa1 c.121.1.1 (A:3-158) Alternate ribose 5-phosphate isomerase B, RpiB {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=28.02 E-value=89 Score=21.66 Aligned_cols=75 Identities=8% Similarity=0.086 Sum_probs=47.8
Q ss_pred cCHHHHHHHHHHHHcCCCCe-EEEeCCCCccHHHHHHHHHHH--hcC----------CCCCCceEEeecCCCCChHhHHH
Q 020071 29 GNLDAVARLGIIARDGNMPN-LILAGPPGTGKTTSILALAHE--LLG----------PNYREAVMELNASDDRGIDVVRN 95 (331)
Q Consensus 29 g~~~~~~~l~~~l~~~~~~~-~ll~G~~G~GKt~la~~l~~~--l~~----------~~~~~~~~~~~~~~~~~~~~i~~ 95 (331)
..++....+...+..+.... ++||| +|.|-+-.|..+..- ..| +..+.+++.+...- .+.+...+
T Consensus 43 dYpd~a~~va~~v~~~~~~~GIliCG-tG~G~sIaANK~~GIRAal~~d~~~A~~ar~hNnaNVL~lGa~~-~~~~~a~~ 120 (156)
T d2vvpa1 43 DYPAFCIAAATRTVADPGSLGIVLGG-SGNGEQIAANKVPGARCALAWSVQTAALAREHNNAQLIGIGGRM-HTVAEALA 120 (156)
T ss_dssp CHHHHHHHHHHHHHHSTTCEEEEEES-SSHHHHHHHHTSTTCCEEECCSHHHHHHHHHTTCCSEEEEEGGG-SCHHHHHH
T ss_pred chhHHHHHHHHHhhccccceEEEeec-CcHHHHHHHHhhcCeEeeeeCCHHHHHHHHHhcCCcEEEEccee-cCHHHHHH
Confidence 34556666666777766544 78888 799998888765221 011 12234555555443 46778888
Q ss_pred HHHHHHhccc
Q 020071 96 KIKMFAQKKV 105 (331)
Q Consensus 96 ~i~~~~~~~~ 105 (331)
+++.|..+++
T Consensus 121 iv~~~l~t~F 130 (156)
T d2vvpa1 121 IVDAFVTTPW 130 (156)
T ss_dssp HHHHHHHSCC
T ss_pred HHHHHHcCCC
Confidence 9999998885
No 368
>d1o6da_ c.116.1.3 (A:) Hypothetical protein TM0844 {Thermotoga maritima [TaxId: 2336]}
Probab=27.46 E-value=86 Score=21.30 Aligned_cols=117 Identities=12% Similarity=0.166 Sum_probs=61.1
Q ss_pred EEEeCCCCccHHHHHHHHHHHhcCCCCCCceEEeecCCCCChHhHHHHH-HHHHhcccCCCCCCceEEEEeCC-CCCCHH
Q 020071 49 LILAGPPGTGKTTSILALAHELLGPNYREAVMELNASDDRGIDVVRNKI-KMFAQKKVTLPPGKHKVVVLDEA-DSMTAG 126 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i-~~~~~~~~~~~~~~~~vviide~-d~l~~~ 126 (331)
++-.|..-..=...+..+.+.+. ..+...++++......+.+.+.+.- +..... . ..+..+|++||- ..++..
T Consensus 5 Ii~iGK~~~~~~~~i~~Y~kRl~-~~~~~~iielk~~~~~~~~~~~~~E~~~il~~-i---~~~~~~I~LDe~Gk~~sS~ 79 (147)
T d1o6da_ 5 IAVIGKLDGFIKEGIKHYEKFLR-RFCKPEVLEIKRVHRGSIEEIVRKETEDLTNR-I---LPGSFVMVMDKRGEEVSSE 79 (147)
T ss_dssp EEEESCCCHHHHHHHHHHHHHHT-TTCEEEEEEECCCCCSCHHHHHHHHHHHHHTT-C---CTTCEEEEEEEEEEECCHH
T ss_pred EEEEeCcCHHHHHHHHHHHHHhc-CCCCceEEEeccccCCCHHHHHHHHHHHHhcc-C---CCCCEEEEEecccCCcCCH
Confidence 45557542111234444455552 2233455666544433333332221 111211 1 345678999985 345555
Q ss_pred HHHHHHHHHHHhcCCcEEEEeeCCCCCCChhhhcccc-eeeecCCCH
Q 020071 127 AQQALRRTMEIYSNSTRFALACNVSSKIIEPIQSRCA-IVRFSRLSD 172 (331)
Q Consensus 127 ~~~~Ll~~le~~~~~~~~I~~~~~~~~l~~~l~sr~~-~i~~~~~~~ 172 (331)
....+++-......++.||+- .+..+.+.+++|+. .+.|.+++-
T Consensus 80 ~fA~~l~~~~~~g~~i~FiIG--Ga~Gl~~~~~~~a~~~lSls~mT~ 124 (147)
T d1o6da_ 80 EFADFLKDLEMKGKDITILIG--GPYGLNEEIFAKAHRVFSLSKMTF 124 (147)
T ss_dssp HHHHHHHHHHHHTCCEEEEEC--CTTCCCGGGGGGCSEEEECCSSCC
T ss_pred HHHHHHHHHHhcCCCCEEEEE--CCCCCCHHHHHhcCcEEeCCcCcc
Confidence 544444444434455655554 45677888989875 578888874
No 369
>d1vkja_ c.37.1.5 (A:) Heparan sulfate 3-O-sulfotransferase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=27.13 E-value=12 Score=28.29 Aligned_cols=25 Identities=20% Similarity=0.331 Sum_probs=21.1
Q ss_pred CCCCeEEEeCCCCccHHHHHHHHHH
Q 020071 44 GNMPNLILAGPPGTGKTTSILALAH 68 (331)
Q Consensus 44 ~~~~~~ll~G~~G~GKt~la~~l~~ 68 (331)
..+|++++.|.|-+|-|.+...+.+
T Consensus 3 ~~lP~~~iiG~prsGTT~L~~iL~~ 27 (258)
T d1vkja_ 3 QQLPQTIIIGVRKGGTRALLEMLSL 27 (258)
T ss_dssp ECCCSEEEEECTTSSHHHHHHHHHT
T ss_pred CCCCCEEEECCCCchHHHHHHHHHc
Confidence 4678899999999999998777765
No 370
>d2daha1 a.5.2.1 (A:8-48) Ubiquilin-3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.29 E-value=46 Score=17.38 Aligned_cols=30 Identities=17% Similarity=0.200 Sum_probs=20.3
Q ss_pred hcCCCCCHHHHHHHHHhcCCCHHHHHHHHHH
Q 020071 185 EEKVPYVPEGLEAIIFTADGDMRQALNNLQA 215 (331)
Q Consensus 185 ~~~~~i~~~~~~~l~~~~~g~~r~~~~~l~~ 215 (331)
.-|+. +++.--.....++||+..|+..|..
T Consensus 11 ~MGF~-d~~~Ni~AL~~t~Gdv~~Aie~Ll~ 40 (41)
T d2daha1 11 SMGFL-NREANLQALIATGGDVDAAVEKLRQ 40 (41)
T ss_dssp HHTCC-CHHHHHHHHHHHTSCHHHHHHHHHH
T ss_pred HcCCC-CHHHHHHHHHHcCCCHHHHHHHHHh
Confidence 34553 4444445567889999999988753
No 371
>d1wjia_ a.5.2.1 (A:) Tudor domain containing protein 3, TDRD3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.18 E-value=59 Score=18.61 Aligned_cols=27 Identities=19% Similarity=0.299 Sum_probs=23.0
Q ss_pred CCCHHHHHHHHHhcCCCHHHHHHHHHH
Q 020071 189 PYVPEGLEAIIFTADGDMRQALNNLQA 215 (331)
Q Consensus 189 ~i~~~~~~~l~~~~~g~~r~~~~~l~~ 215 (331)
.+++..+......+++|+..+++.|-.
T Consensus 20 GF~~~~a~~AL~~~~~~~e~A~~wL~~ 46 (63)
T d1wjia_ 20 GFSKEASRQALMDNGNNLEAALNVLLT 46 (63)
T ss_dssp TCCHHHHHHHHHHTTSCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 588888888888899999999998854
No 372
>d1rw1a_ c.47.1.12 (A:) Hypothetical protein PA3664 (YffB) {Pseudomonas aeruginosa [TaxId: 287]}
Probab=24.99 E-value=41 Score=21.85 Aligned_cols=46 Identities=13% Similarity=-0.007 Sum_probs=30.6
Q ss_pred EEEeCCCCccHHHHHHHHHHHhcCCCCCCceEEee--cCCCCChHhHHHHHHHH
Q 020071 49 LILAGPPGTGKTTSILALAHELLGPNYREAVMELN--ASDDRGIDVVRNKIKMF 100 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l~~~~~~~~~~~~~--~~~~~~~~~i~~~i~~~ 100 (331)
+.|||-|+|+|+.-|..+.+.- +.++-.++ ... .+.+.+.+.+...
T Consensus 2 ~~iY~~p~Cs~srka~~~L~~~-----~i~~~~idy~k~p-ls~~eL~~ll~~~ 49 (114)
T d1rw1a_ 2 YVLYGIKACDTMKKARTWLDEH-----KVAYDFHDYKAVG-IDREHLRRWCAEH 49 (114)
T ss_dssp EEEEECSSCHHHHHHHHHHHHT-----TCCEEEEEHHHHC-CCHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHc-----CCCeEEEEccccC-CCHHHHHHHHHhc
Confidence 6899999999999999998875 44444333 222 2445666665543
No 373
>d1j6ua3 c.72.2.1 (A:89-295) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}
Probab=24.76 E-value=44 Score=24.06 Aligned_cols=35 Identities=23% Similarity=0.267 Sum_probs=24.7
Q ss_pred HHHHHHHcCCCCeEEEeCCCCccHHHHHHHHHHHhcC
Q 020071 36 RLGIIARDGNMPNLILAGPPGTGKTTSILALAHELLG 72 (331)
Q Consensus 36 ~l~~~l~~~~~~~~ll~G~~G~GKt~la~~l~~~l~~ 72 (331)
.+++.+++.+...+-++|- .||||.+..++.-+..
T Consensus 4 ~~~~~l~~~~~~~iAITGT--nGKTTt~~~l~~iL~~ 38 (207)
T d1j6ua3 4 YFRDTLKREKKEEFAVTGT--DGKTTTTAMVAHVLKH 38 (207)
T ss_dssp HHHHHHHHHCCCEEEEECS--SSHHHHHHHHHHHHHH
T ss_pred HHHHHHhhcCCCEEEEECC--CCHHHHHHHHHHHHHh
Confidence 3455555555445789996 5799999998887753
No 374
>d1gg4a1 c.59.1.1 (A:313-447) UDP-murNac-tripeptide D-alanyl-D-alanine-adding enzyme MurF {Escherichia coli [TaxId: 562]}
Probab=23.95 E-value=57 Score=21.86 Aligned_cols=30 Identities=10% Similarity=0.303 Sum_probs=14.2
Q ss_pred ChHhHHHHHHHHHhcccCCCCCCceEEEEeCCCCCC
Q 020071 89 GIDVVRNKIKMFAQKKVTLPPGKHKVVVLDEADSMT 124 (331)
Q Consensus 89 ~~~~i~~~i~~~~~~~~~~~~~~~~vviide~d~l~ 124 (331)
+++.+...++.+...+ +++++|+=+...|.
T Consensus 24 nP~Sm~aAl~~l~~~~------~~ki~vLGdM~ELG 53 (135)
T d1gg4a1 24 NVGSMTAAVQVLAEMP------GYRVLVVGDMAELG 53 (135)
T ss_dssp CHHHHHHHHHHHHHSS------SEEEEEECCCCCCT
T ss_pred CHHHHHHHHHHhhccC------CCceEEEcccccch
Confidence 3444444554443322 34566665555553
No 375
>d1w25a2 c.23.1.1 (A:141-293) Response regulator PleD, receiver domain {Caulobacter crescentus [TaxId: 155892]}
Probab=23.93 E-value=81 Score=21.46 Aligned_cols=71 Identities=6% Similarity=0.112 Sum_probs=42.6
Q ss_pred CceEEEEeCCCCCCHHHHHHHHHHHHH--hcCCcEEEEeeCCCC--CCChhhhcccceeeecCCCHHHHHHHHHHHH
Q 020071 111 KHKVVVLDEADSMTAGAQQALRRTMEI--YSNSTRFALACNVSS--KIIEPIQSRCAIVRFSRLSDEEILSRLMVVV 183 (331)
Q Consensus 111 ~~~vviide~d~l~~~~~~~Ll~~le~--~~~~~~~I~~~~~~~--~l~~~l~sr~~~i~~~~~~~~~~~~~l~~~~ 183 (331)
++.+|++|=- |+.-..-.+++.+.. ...++++|+.|.... .....+..-+.-+-.+|++.+++...++...
T Consensus 55 ~~DlillD~~--mP~~dG~el~~~ir~~~~~~~iPiI~lt~~~~~~~~~~a~~~Ga~d~l~KP~~~~~L~~~i~~~l 129 (153)
T d1w25a2 55 PVDLVIVNAA--AKNFDGLRFTAALRSEERTRQLPVLAMVDPDDRGRMVKALEIGVNDILSRPIDPQELSARVKTQI 129 (153)
T ss_dssp SCSEEEEETT--CSSSCHHHHHHHHHTSGGGTTCCEEEEECTTCHHHHHHHHHTTCCEEEESSCCHHHHHHHHHHHH
T ss_pred CCCEEEEECc--cccccchHHHHHHHhccccccceeEEeecCCCHHHHHHHHhcCcceEEECCCCHHHHHHHHHHHH
Confidence 3569999841 222223445555542 234676777665432 2334444446678889999999988877654
No 376
>d1h3oa_ a.22.1.3 (A:) TAF(II)-135, (TAF(II)-130, hTAF4), histone fold domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.79 E-value=36 Score=18.64 Aligned_cols=44 Identities=9% Similarity=0.197 Sum_probs=28.9
Q ss_pred CCHHHHHHHHHHHHHhcCCC-CCHHHHHHHHHhcCCCHHHHHHHHHHH
Q 020071 170 LSDEEILSRLMVVVQEEKVP-YVPEGLEAIIFTADGDMRQALNNLQAT 216 (331)
Q Consensus 170 ~~~~~~~~~l~~~~~~~~~~-i~~~~~~~l~~~~~g~~r~~~~~l~~~ 216 (331)
+....+...+.+++++.|+. ++++.+..+...+.. ++.+.++++
T Consensus 3 L~~~~Lq~ri~~I~~k~Gl~e~~~dV~~lISHA~Qe---RLk~lvEKl 47 (50)
T d1h3oa_ 3 LLQAPLQRRILEIGKKHGITELHPDVVSYVSHATQQ---RLQNLVEKI 47 (50)
T ss_dssp SCHHHHHHHHHHHHHTTTCCEECTTHHHHHHHHHHH---HHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHcCCCccCHHHHHHHHHHHHH---HHHHHHHHH
Confidence 34566788888899999874 566777777666543 344455544
No 377
>d2djia1 c.31.1.3 (A:187-363) Pyruvate oxidase {Aerococcus viridans [TaxId: 1377]}
Probab=23.60 E-value=77 Score=22.16 Aligned_cols=46 Identities=17% Similarity=0.301 Sum_probs=31.6
Q ss_pred cCHHHHHHHHHHHHcCCCCeEEEeCCCCccHHHHHHHHHHHhcCCCCCCceE
Q 020071 29 GNLDAVARLGIIARDGNMPNLILAGPPGTGKTTSILALAHELLGPNYREAVM 80 (331)
Q Consensus 29 g~~~~~~~l~~~l~~~~~~~~ll~G~~G~GKt~la~~l~~~l~~~~~~~~~~ 80 (331)
..++.++.+.+.+.+-+.| +++.|.--.+-..-+..|++.+ +.+++
T Consensus 6 P~~~~i~~~~~~l~~Ak~P-vii~G~g~~~a~~~l~~lae~l-----~~Pv~ 51 (177)
T d2djia1 6 PAAQDIDAAVELLNNSKRP-VIYAGIGTMGHGPAVQELARKI-----KAPVI 51 (177)
T ss_dssp CCHHHHHHHHHHHHTCSSE-EEEECGGGTTCHHHHHHHHHHH-----TCCEE
T ss_pred cCHHHHHHHHHHHHhCCCE-EEEECcChhhHHHHHHHhhhcc-----ceEEE
Confidence 4667888899999888766 7888852223334577788888 55554
No 378
>d1o1xa_ c.121.1.1 (A:) Putative sugar-phosphate isomerase {Thermotoga maritima [TaxId: 2336]}
Probab=22.46 E-value=1.1e+02 Score=20.81 Aligned_cols=75 Identities=12% Similarity=0.099 Sum_probs=49.8
Q ss_pred cCHHHHHHHHHHHHcCCCCe-EEEeCCCCccHHHHHHHHHHHh--cC----------CCCCCceEEeecCCCCChHhHHH
Q 020071 29 GNLDAVARLGIIARDGNMPN-LILAGPPGTGKTTSILALAHEL--LG----------PNYREAVMELNASDDRGIDVVRN 95 (331)
Q Consensus 29 g~~~~~~~l~~~l~~~~~~~-~ll~G~~G~GKt~la~~l~~~l--~~----------~~~~~~~~~~~~~~~~~~~~i~~ 95 (331)
..++....+.+.+..+...- ++|+| +|.|-+..|..+..-- .| +..+.+++.+.... .+.+...+
T Consensus 43 dYpd~a~~va~~v~~~~~~~GIliCG-tG~G~siaANK~~GIRAa~~~d~~~A~~ar~hNnaNvL~lGa~~-~~~~~a~~ 120 (145)
T d1o1xa_ 43 DYPDYAKKVVQSILSNEADFGILLCG-TGLGMSIAANRYRGIRAALCLFPDMARLARSHNNANILVLPGRL-IGAELAFW 120 (145)
T ss_dssp CHHHHHHHHHHHHHTTSCSEEEEEES-SSHHHHHHHTTSTTCCEEECSSHHHHHHHHHTTCCSEEEEETTT-SCHHHHHH
T ss_pred CccHHHHHHHHHHhcCcccEEEEecC-CcHHHHHHHHcCCCCeeeeecCHHHHHHHHHhcCceEEEEccEe-cCHHHHHH
Confidence 35667777778887776544 67777 7999988877543210 01 12244566555443 47788888
Q ss_pred HHHHHHhccc
Q 020071 96 KIKMFAQKKV 105 (331)
Q Consensus 96 ~i~~~~~~~~ 105 (331)
+++.|...++
T Consensus 121 iv~~~l~t~F 130 (145)
T d1o1xa_ 121 IVDTFLSTPF 130 (145)
T ss_dssp HHHHHHHCCC
T ss_pred HHHHHHCCCC
Confidence 9999999887
No 379
>d1oqya1 a.5.2.1 (A:160-200) DNA repair protein Hhr23a {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.41 E-value=29 Score=18.13 Aligned_cols=25 Identities=20% Similarity=0.215 Sum_probs=19.9
Q ss_pred CCCHHHHHHHHHhcCCCHHHHHHHH
Q 020071 189 PYVPEGLEAIIFTADGDMRQALNNL 213 (331)
Q Consensus 189 ~i~~~~~~~l~~~~~g~~r~~~~~l 213 (331)
.++++.+....+.++||+..|++.|
T Consensus 15 GF~~~~a~~AL~~~~~N~e~A~~~L 39 (41)
T d1oqya1 15 GYERERVVAALRASYNNPHRAVEYL 39 (41)
T ss_dssp TCCSHHHHHHHHHSCSSTTHHHHTT
T ss_pred CCCHHHHHHHHHHhCCCHHHHHHHH
Confidence 5777777777888889999888754
No 380
>d1w36b1 c.37.1.19 (B:1-485) Exodeoxyribonuclease V beta chain (RecB), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=21.92 E-value=25 Score=29.12 Aligned_cols=43 Identities=19% Similarity=0.223 Sum_probs=28.4
Q ss_pred CceEEEEeCCCCCCHHHHHHHHHHHHHhcCCcEEEEeeCCCCCC
Q 020071 111 KHKVVVLDEADSMTAGAQQALRRTMEIYSNSTRFALACNVSSKI 154 (331)
Q Consensus 111 ~~~vviide~d~l~~~~~~~Ll~~le~~~~~~~~I~~~~~~~~l 154 (331)
+++.|+|||++-.++....-|..+.... +...+.++......+
T Consensus 377 ~~~~ilVDEfQDts~~Q~~ll~~L~~~~-~~~~l~~VGD~kQSI 419 (485)
T d1w36b1 377 RFPVAMIDEFQDTDPQQYRIFRRIWHHQ-PETALLLIGDPKQAI 419 (485)
T ss_dssp HCSEEEECSGGGCCHHHHHHHHHHHTTC-TTCEEEEEECGGGCC
T ss_pred cCCeEEecccccCCHHHHHHHHHHHhCC-CCCeEEEEecCcchh
Confidence 4789999999999986655555555443 344455566554444
No 381
>d1texa_ c.37.1.5 (A:) Stf0 sulfotransferase {Mycobacterium smegmatis [TaxId: 1772]}
Probab=21.87 E-value=35 Score=24.84 Aligned_cols=25 Identities=12% Similarity=0.174 Sum_probs=21.3
Q ss_pred CCCeEEEeCCCCccHHHHHHHHHHH
Q 020071 45 NMPNLILAGPPGTGKTTSILALAHE 69 (331)
Q Consensus 45 ~~~~~ll~G~~G~GKt~la~~l~~~ 69 (331)
+.|.+++.|.+-+|=|.+...|.+.
T Consensus 2 ~~~~~~I~g~pRSGTT~L~~~L~~~ 26 (265)
T d1texa_ 2 HPTAYLVLASQRSGSTLLVESLRAT 26 (265)
T ss_dssp CCCEEEEEECTTSTHHHHHHHHHHH
T ss_pred CCCCEEEECCCCChHHHHHHHHHcC
Confidence 3466999999999999998888875
No 382
>d1veja1 a.5.2.1 (A:8-68) 4931431F19Rik {Mouse (Mus musculus) [TaxId: 10090]}
Probab=21.49 E-value=72 Score=18.25 Aligned_cols=28 Identities=18% Similarity=0.248 Sum_probs=19.4
Q ss_pred hcCCCCCHHHHHHHHHhcCCCHHHHHHHH
Q 020071 185 EEKVPYVPEGLEAIIFTADGDMRQALNNL 213 (331)
Q Consensus 185 ~~~~~i~~~~~~~l~~~~~g~~r~~~~~l 213 (331)
.-|+. +.+.--.....++||+..+++.|
T Consensus 31 eMGF~-d~~~Nl~AL~~t~Gdv~~Aie~L 58 (61)
T d1veja1 31 ALGFA-NRDANLQALVATDGDIHAAIEML 58 (61)
T ss_dssp HHTCC-CHHHHHHHHHHTTSCHHHHHHHH
T ss_pred HcCCC-CHHHHHHHHHHcCCCHHHHHHHH
Confidence 34543 44544455678899999999876
No 383
>d1fova_ c.47.1.1 (A:) Glutaredoxin (Grx, thioltransferase) {Escherichia coli, Grx3 [TaxId: 562]}
Probab=21.12 E-value=80 Score=18.66 Aligned_cols=35 Identities=14% Similarity=0.014 Sum_probs=28.2
Q ss_pred eEEEeCCCCccHHHHHHHHHHHhcCCCCCCceEEeecCCC
Q 020071 48 NLILAGPPGTGKTTSILALAHELLGPNYREAVMELNASDD 87 (331)
Q Consensus 48 ~~ll~G~~G~GKt~la~~l~~~l~~~~~~~~~~~~~~~~~ 87 (331)
++.+|+-++++=-.-|+.+.+.. +.++.+++-...
T Consensus 2 ~I~iys~~~Cp~C~~ak~~L~~~-----~i~y~~~di~~~ 36 (82)
T d1fova_ 2 NVEIYTKETCPYCHRAKALLSSK-----GVSFQELPIDGN 36 (82)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHH-----TCCCEEEECTTC
T ss_pred cEEEEeCCCCHhHHHHHHHHHHc-----CCCeEEEeccch
Confidence 47899999999999999999988 667777665543
No 384
>d1zgza1 c.23.1.1 (A:2-121) TorCAD operon transcriptional regulator TorD, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=20.99 E-value=1e+02 Score=19.72 Aligned_cols=70 Identities=16% Similarity=0.114 Sum_probs=40.8
Q ss_pred ceEEEEeC-CCCCCHHHHHHHHHHHHHhcCCcEEEEeeCCCC--CCChhhhcccceeeecCCCHHHHHHHHHHHHHh
Q 020071 112 HKVVVLDE-ADSMTAGAQQALRRTMEIYSNSTRFALACNVSS--KIIEPIQSRCAIVRFSRLSDEEILSRLMVVVQE 185 (331)
Q Consensus 112 ~~vviide-~d~l~~~~~~~Ll~~le~~~~~~~~I~~~~~~~--~l~~~l~sr~~~i~~~~~~~~~~~~~l~~~~~~ 185 (331)
+.++++|- ...++ .-.+++.+...+ .+.+|+.|.... .....+..=+.-+-.+|.+.+++...+++..++
T Consensus 46 ~dliilD~~mp~~~---g~~~~~~~~~~~-~~piI~lt~~~~~~~~~~a~~~Ga~dyl~KP~~~~~L~~~i~~~lrR 118 (120)
T d1zgza1 46 VDLILLDINLPDEN---GLMLTRALRERS-TVGIILVTGRSDRIDRIVGLEMGADDYVTKPLELRELVVRVKNLLWR 118 (120)
T ss_dssp CSEEEEESCCSSSC---HHHHHHHHHTTC-CCEEEEEESSCCHHHHHHHHHHTCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred CCEEeeehhhccch---hHHHHHHHhccC-CCeEEEEEccCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHcc
Confidence 56888874 22222 223445555433 455666554432 222334333567888999999999888776543
No 385
>d2a6na1 c.1.10.1 (A:1-292) Dihydrodipicolinate synthase {Escherichia coli [TaxId: 562]}
Probab=20.95 E-value=1.6e+02 Score=22.18 Aligned_cols=172 Identities=12% Similarity=0.174 Sum_probs=96.9
Q ss_pred CCCCChHhHHHHHHHHHhcccCCCCCCceEEEE---eCCCCCCHHHHHHHHH-HHHHhcCCcEEEEeeCCCC--CCC---
Q 020071 85 SDDRGIDVVRNKIKMFAQKKVTLPPGKHKVVVL---DEADSMTAGAQQALRR-TMEIYSNSTRFALACNVSS--KII--- 155 (331)
Q Consensus 85 ~~~~~~~~i~~~i~~~~~~~~~~~~~~~~vvii---de~d~l~~~~~~~Ll~-~le~~~~~~~~I~~~~~~~--~l~--- 155 (331)
......+.++..++....... ..+++. =|...|+.+....+.+ +.+....++.+|..+...+ ...
T Consensus 16 d~~iD~~~~~~~i~~l~~~Gv------~Gl~~~GstGE~~~Ls~~Er~~~~~~~~~~~~~~~~vi~g~~~~s~~~~i~~~ 89 (292)
T d2a6na1 16 KGNVCRASLKKLIDYHVASGT------SAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGTGANATAEAISLT 89 (292)
T ss_dssp TSSBCHHHHHHHHHHHHHHTC------CEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCC------CEEEECeeccchhhCCHHHHHHHhhhhhhhccccceeEeecccchHHHHHHHh
Confidence 334455677777777766442 334444 3677788777666665 4555556666666543321 111
Q ss_pred hhhhcc-cc-ee----eecCCCHHHHHHHHHHHHHhc-------------CCCCCHHHHHHHHHh--------cCCCHHH
Q 020071 156 EPIQSR-CA-IV----RFSRLSDEEILSRLMVVVQEE-------------KVPYVPEGLEAIIFT--------ADGDMRQ 208 (331)
Q Consensus 156 ~~l~sr-~~-~i----~~~~~~~~~~~~~l~~~~~~~-------------~~~i~~~~~~~l~~~--------~~g~~r~ 208 (331)
....+. +. ++ .+.+++++++.++.+..+..- |..++.+.+..|++. +.+|...
T Consensus 90 ~~a~~~Gad~~~~~pP~~~~~~~~~i~~~f~~v~~~~~~pi~iYn~P~~~g~~~~~e~~~~L~~~pnv~giK~~~~~~~~ 169 (292)
T d2a6na1 90 QRFNDSGIVGCLTVTPYYNRPSQEGLYQHFKAIAEHTDLPQILYNVPSATGCDLLPETVGRLAKVKNIIGIKEATGNLTR 169 (292)
T ss_dssp HTTTTSSCCEEEEECCCSSCCCHHHHHHHHHHHHHTCSSCEEEEECHHHHSCCCCHHHHHHHHTSTTEEEEEECSCCTTH
T ss_pred ccHHhcCCcceeccCCCCCCCCHHHHHHHHHHHhhccCCcEEEEEeccccCCccCHHHHHHHhcCCCEEEEEeccCcchh
Confidence 111111 11 11 233468999999999988743 456788888888754 3467766
Q ss_pred HHHHHHHHh------hCCCccchhhhh-------hhcCCCCHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 020071 209 ALNNLQATY------SGFRFVNQENVF-------KVCDQPHPLHVKNMVRNVLEGKFDDACSGLKQL 262 (331)
Q Consensus 209 ~~~~l~~~~------~~~~~i~~~~v~-------~~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~l 262 (331)
....++... .+....-..... .......++.+.++.++..++|.++|.++..++
T Consensus 170 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~G~~G~i~~~~~~~p~~~~~i~~~~~~g~~~~a~~l~~~l 236 (292)
T d2a6na1 170 VNQIKELVSDDFVLLSGDDASALDFMQLGGHGVISVTANVAARDMAQMCKLAAEGHFAEARVINQRL 236 (292)
T ss_dssp HHHHHTTSCTTSEEEECCGGGHHHHHHTTCCEEEESGGGTCHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hhhhhhhcCCccEEeecchhhhhhHhhCCceEEEeecchhhhhchhhhhhHhhcCCcchHHHHHHHH
Confidence 666553321 111111001000 001124457788999999999999988776654
No 386
>d2bwba1 a.5.2.1 (A:328-371) DSK2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=20.79 E-value=61 Score=17.17 Aligned_cols=28 Identities=18% Similarity=0.132 Sum_probs=19.2
Q ss_pred hcCCCCCHHHHHHHHHhcCCCHHHHHHHH
Q 020071 185 EEKVPYVPEGLEAIIFTADGDMRQALNNL 213 (331)
Q Consensus 185 ~~~~~i~~~~~~~l~~~~~g~~r~~~~~l 213 (331)
.-|+. +.+.--.....++||+..|++.|
T Consensus 14 ~MGF~-d~~~Ni~AL~~t~GdV~~Aie~L 41 (44)
T d2bwba1 14 DMGFF-DFDRNVAALRRSGGSVQGALDSL 41 (44)
T ss_dssp HTTCC-CHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HcCCC-cHHHHHHHHHHcCCCHHHHHHHH
Confidence 44653 44444455678899999999876
No 387
>d2g3qa1 a.5.2.1 (A:1339-1381) Endocytic protein Ede1, YBL047C {Saccharomyces cerevisiae [TaxId: 4932]}
Probab=20.63 E-value=60 Score=17.01 Aligned_cols=27 Identities=19% Similarity=0.194 Sum_probs=22.1
Q ss_pred CCCCCHHHHHHHHHhcCCCHHHHHHHH
Q 020071 187 KVPYVPEGLEAIIFTADGDMRQALNNL 213 (331)
Q Consensus 187 ~~~i~~~~~~~l~~~~~g~~r~~~~~l 213 (331)
+..++++.+....+.+++|+..+.|.|
T Consensus 13 ~MGF~e~~A~~AL~k~~wnleaAtN~L 39 (43)
T d2g3qa1 13 GMGFTEEEAHNALEKCNWDLEAATNFL 39 (43)
T ss_dssp TTTSCHHHHHHHHHHHTSCHHHHHHHH
T ss_pred hcCCCHHHHHHHHHHcCCCHHHHHHHH
Confidence 446888888777888889999998876
No 388
>d1kjwa2 c.37.1.1 (A:526-724) Guanylate kinase-like domain of Psd-95 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=20.63 E-value=30 Score=25.17 Aligned_cols=20 Identities=30% Similarity=0.408 Sum_probs=17.2
Q ss_pred EEEeCCCCccHHHHHHHHHHHhc
Q 020071 49 LILAGPPGTGKTTSILALAHELL 71 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~l~ 71 (331)
++|.|| ||+++.+.|.+...
T Consensus 12 ivi~Gp---~K~ti~~~L~~~~p 31 (199)
T d1kjwa2 12 IIILGP---TKDRANDDLLSEFP 31 (199)
T ss_dssp EEEEST---THHHHHHHHHHHCT
T ss_pred EEEECc---CHHHHHHHHHHhCc
Confidence 788897 59999999999863
No 389
>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}
Probab=20.36 E-value=33 Score=21.38 Aligned_cols=21 Identities=19% Similarity=0.246 Sum_probs=19.1
Q ss_pred EEEeCCCCccHHHHHHHHHHH
Q 020071 49 LILAGPPGTGKTTSILALAHE 69 (331)
Q Consensus 49 ~ll~G~~G~GKt~la~~l~~~ 69 (331)
+.|.|=-|+|-+.+|+.+.+.
T Consensus 4 ihfiGIgG~GMs~LA~~L~~~ 24 (89)
T d1j6ua1 4 IHFVGIGGIGMSAVALHEFSN 24 (89)
T ss_dssp EEEETTTSHHHHHHHHHHHHT
T ss_pred EEEEeECHHHHHHHHHHHHhC
Confidence 789999999999999988875
Done!