BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020074
(331 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1QDL|A Chain A, The Crystal Structure Of Anthranilate Synthase From
Sulfolobus Solfataricus
Length = 422
Score = 194 bits (494), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 122/294 (41%), Positives = 160/294 (54%), Gaps = 20/294 (6%)
Query: 31 FGPKLESSSMTSEAYKEAVLQAKEHILAGDIFQIVLSQRFERRTFA-DPFEIYRALRIVN 89
F S+ +Y+ V ++ E+I +G IFQ+VLS RF R F+ DP IY LR +N
Sbjct: 147 FKVSFYDESLNKNSYERIVSESLEYIRSGYIFQVVLS-RFYRYIFSGDPLRIYYNLRRIN 205
Query: 90 PSPYMTYLQARGCILVASSPEILTRVKKRKITNRPLAGTVRRGKTPKEDLVFEKELLNDE 149
PSPYM YL+ L+ SSPE+L RV+ + P+AGT RG +EDL E EL+N E
Sbjct: 206 PSPYMFYLKFDEKYLIGSSPELLFRVQDNIVETYPIAGTRPRGADQEEDLKLELELMNSE 265
Query: 150 KQCAEHIMLVDLGRNDXXXXXXXXXXXXEKLMNIEHYSHVMHISSTVTGELLDHLTSWDA 209
K AEH+MLVDL RND +LM +E YSHV HI S V G L + +
Sbjct: 266 KDKAEHLMLVDLARNDLGKVCVPGTVKVPELMYVEKYSHVQHIVSKVIGTLKKKYNALNV 325
Query: 210 LRAALPVGTVSGAPKVKAMELIDELEVTRRGPYSGGFGGISFTGDMDIALALRTIVFPTA 269
L A P GTVSGAPK AM +I+ LE +RGPY+G G IS G+ + A+A+RT
Sbjct: 326 LSATFPAGTVSGAPKPMAMNIIETLEEYKRGPYAGAVGFISADGNAEFAIAIRTAFL--- 382
Query: 270 TRYDTMYSYKDVDKRREWIAHLQAGAGIVADSDPNDEQKECENKAAGIARAIDL 323
+ + + AGAGIV DS+P E E E+K + AI +
Sbjct: 383 ---------------NKELLRIHAGAGIVYDSNPESEYFETEHKLKALKTAIGV 421
>pdb|1I1Q|A Chain A, Structure Of The Cooperative Allosteric Anthranilate
Synthase From Salmonella Typhimurium
Length = 520
Score = 171 bits (433), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 110/295 (37%), Positives = 151/295 (51%), Gaps = 27/295 (9%)
Query: 38 SSMTSEAYKEAVLQAKEHILAGDIFQIVLSQRFERRTFADPFEIYRALRIVNPSPYMTYL 97
+ + +A+ V Q ++ I AG+IFQ+V S+RF P Y L+ NPSPYM ++
Sbjct: 238 CNQSDDAFGAVVRQLQKAIRAGEIFQVVPSRRFSLPC-PSPLAAYYVLKKSNPSPYMFFM 296
Query: 98 QARGCILVASSPEILTR--VKKRKITNRPLAGTVRRGK----TPKEDL--VFEKELLNDE 149
Q L +SPE + R+I P+AGT RG+ T DL E ++ D
Sbjct: 297 QDNDFTLFGASPESSLKYDAASRQIEIYPIAGTRPRGRRADGTLDRDLDSRIELDMRTDH 356
Query: 150 KQCAEHIMLVDLGRNDXXXXXXXXXXXXEKLMNIEHYSHVMHISSTVTGELLDHLTSWDA 209
K+ +EH+MLVDL RND L ++ YS+VMH+ S V GEL L + A
Sbjct: 357 KELSEHLMLVDLARNDLARICTPGSRYVADLTKVDRYSYVMHLVSRVVGELRHDLDALHA 416
Query: 210 LRAALPVGTVSGAPKVKAMELIDELEVTRRGPYSGGFGGISFTGDMDIALALRTIVFPTA 269
RA + +GT+SGAPKV+AM+LI + E RRG Y G G + GD+D + +R+ +
Sbjct: 417 YRACMNMGTLSGAPKVRAMQLIADAEGQRRGSYGGAVGYFTAHGDLDTCIVIRSALV--- 473
Query: 270 TRYDTMYSYKDVDKRREWIAHLQAGAGIVADSDPNDEQKECENKAAGIARAIDLA 324
IA +QAGAGIV DS P E E NKA + RAI A
Sbjct: 474 ---------------ENGIATVQAGAGIVLDSVPQSEADETRNKARAVLRAIATA 513
>pdb|4GRH|A Chain A, Crystal Structure Of Pabb Of Stenotrophomonas Maltophilia
Length = 457
Score = 170 bits (431), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 102/279 (36%), Positives = 150/279 (53%), Gaps = 21/279 (7%)
Query: 45 YKEAVLQAKEHILAGDIFQIVLSQRFERRTFA--DPFEIYRALRIVNPSPYMTYLQARGC 102
+ + V + E++ AGD+FQ+ LS+R+ + A P +Y LR NP+P+ A G
Sbjct: 194 FTDGVRRVIEYLRAGDVFQVNLSRRWNAQFAAPVSPQALYAQLRRANPAPFAGLFSAHGR 253
Query: 103 ILVASSPEILTRVKKRKITNRPLAGTVRRGKTPKEDLVFEKELLNDEKQCAEHIMLVDLG 162
+V+SSPE L V RP+AGT R + +D +EL+ K+ AEH+ML+DL
Sbjct: 254 HVVSSSPERLVSVHAGHAQTRPIAGTRPRFEG-DDDAARIQELVGHPKERAEHVMLIDLE 312
Query: 163 RNDXXXXXXXXXXXXEKLMNIEHYSHVMHISSTVTGELLDHLTSWDALRAALPVGTVSGA 222
RND ++LM +E Y+HV HI S V+G L +T + + A P GT++G
Sbjct: 313 RNDLGRICLPGTVVVDELMTVESYAHVHHIVSNVSGHLRPEVTPGEVIAATFPGGTITGC 372
Query: 223 PKVKAMELIDELEVTRRGPYSGGFGGISFTGDMDIALALRTIVFPTATRYDTMYSYKDVD 282
PKV+ M++I ELE RG Y+G FG ++ GD+D+ + +RT +VD
Sbjct: 373 PKVRCMQIISELEQVPRGAYTGAFGWLNRDGDLDLNILIRT---------------AEVD 417
Query: 283 KRREWIAHLQAGAGIVADSDPNDEQKECENKAAGIARAI 321
+ GAGIV DSDP+ E E KA G+ RA+
Sbjct: 418 GHE---VSFRTGAGIVVDSDPDKELDETRAKARGLLRAL 453
>pdb|1K0E|A Chain A, The Crystal Structure Of Aminodeoxychorismate Synthase
From Formate Grown Crystals
pdb|1K0E|B Chain B, The Crystal Structure Of Aminodeoxychorismate Synthase
From Formate Grown Crystals
pdb|1K0G|A Chain A, The Crystal Structure Of Aminodeoxychorismate Synthase
From Phosphate Grown Crystals
pdb|1K0G|B Chain B, The Crystal Structure Of Aminodeoxychorismate Synthase
From Phosphate Grown Crystals
Length = 453
Score = 168 bits (426), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 102/304 (33%), Positives = 157/304 (51%), Gaps = 25/304 (8%)
Query: 26 LHTRHFGPKLE-------SSSMTSEAYKEAVLQAKEHILAGDIFQIVLSQRFERRTFADP 78
L ++ F P+ + S+MT E Y E Q +E++ +GD +Q+ L+QRF D
Sbjct: 167 LESQQFSPQEDFTLTSDWQSNMTREQYGEKFRQVQEYLHSGDCYQVNLAQRFHATYSGDE 226
Query: 79 FEIYRALRIVNPSPYMTYLQARGCILVASSPEILTRVKKRKITNRPLAGTVRRGKTPKED 138
++ + L N +P+ +L+ +++ SPE +I RP+ GT+ R P+ED
Sbjct: 227 WQAFLQLNQANRAPFSAFLRLEQGAILSLSPERFILCDNSEIQTRPIKGTLPRLPDPQED 286
Query: 139 LVFEKELLNDEKQCAEHIMLVDLGRNDXXXXXXXXXXXXEKLMNIEHYSHVMHISSTVTG 198
+L N K AE++M+VDL RND +L +E + V H+ ST+T
Sbjct: 287 SKQAVKLANSAKDRAENLMIVDLMRNDIGRVAVAGSVKVPELFVVEPFPAVHHLVSTITA 346
Query: 199 ELLDHLTSWDALRAALPVGTVSGAPKVKAMELIDELEVTRRGPYSGGFGGISFTGDMDIA 258
+L + L + D LRAA P G+++GAPKV+AME+IDELE RR + G G +SF G+MD +
Sbjct: 347 QLPEQLHASDLLRAAFPGGSITGAPKVRAMEIIDELEPQRRNAWCGSIGYLSFCGNMDTS 406
Query: 259 LALRTIVFPTATRYDTMYSYKDVDKRREWIAHLQAGAGIVADSDPNDEQKECENKAAGIA 318
+ +RT+ TA S AG GIVADS E +E +K I
Sbjct: 407 ITIRTL---TAINGQIFCS---------------AGGGIVADSQEEAEYQETFDKVNRIL 448
Query: 319 RAID 322
+ ++
Sbjct: 449 KQLE 452
>pdb|1I7Q|A Chain A, Anthranilate Synthase From S. Marcescens
pdb|1I7Q|C Chain C, Anthranilate Synthase From S. Marcescens
pdb|1I7S|A Chain A, Anthranilate Synthase From Serratia Marcescens In Complex
With Its End Product Inhibitor L-Tryptophan
pdb|1I7S|C Chain C, Anthranilate Synthase From Serratia Marcescens In Complex
With Its End Product Inhibitor L-Tryptophan
Length = 519
Score = 159 bits (402), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 107/296 (36%), Positives = 144/296 (48%), Gaps = 27/296 (9%)
Query: 37 SSSMTSEAYKEAVLQAKEHILAGDIFQIVLSQRFERRTFADPFEIYRALRIVNPSPYMTY 96
S + + E Y V + +E I G+IFQ+V S+RF A P Y+ L+ NPSPYM +
Sbjct: 236 SCNQSDEEYGAVVSELQEAIRQGEIFQVVPSRRFSLPCPA-PLGPYQTLKDNNPSPYMFF 294
Query: 97 LQARGCILVASSPEILTR--VKKRKITNRPLAGTVRRGKTPKEDLVF------EKELLND 148
+Q L +SPE + R+I P+AGT RG+ L E E+ D
Sbjct: 295 MQDDDFTLFGASPESALKYDAGNRQIEIYPIAGTRPRGRRADGSLDLDLDSRIELEMRTD 354
Query: 149 EKQCAEHIMLVDLGRNDXXXXXXXXXXXXEKLMNIEHYSHVMHISSTVTGELLDHLTSWD 208
K+ AEH+MLVDL RND L ++ YS VMH+ S V G L L
Sbjct: 355 HKELAEHLMLVDLARNDLARICQAGSRYVADLTKVDRYSFVMHLVSRVVGTLRADLDVLH 414
Query: 209 ALRAALPVGTVSGAPKVKAMELIDELEVTRRGPYSGGFGGISFTGDMDIALALRTIVFPT 268
A +A + +GT+SGAPKV+AM+LI L TRRG Y G G + ++D + +R+
Sbjct: 415 AYQACMNMGTLSGAPKVRAMQLIAALRSTRRGSYGGRVGYFTAVRNLDTCIVIRSAYVED 474
Query: 269 ATRYDTMYSYKDVDKRREWIAHLQAGAGIVADSDPNDEQKECENKAAGIARAIDLA 324
R +QAGAG+V DS P E E NKA + RAI A
Sbjct: 475 GHRT------------------VQAGAGVVQDSIPEREADETRNKARAVLRAIATA 512
>pdb|3H9M|A Chain A, Crystal Structure Of Para-Aminobenzoate Synthetase,
Component I From Cytophaga Hutchinsonii
Length = 436
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 115/232 (49%)
Query: 40 MTSEAYKEAVLQAKEHILAGDIFQIVLSQRFERRTFADPFEIYRALRIVNPSPYMTYLQA 99
++ E+Y A + ++ I GD ++I F + P Y+ L P P+ Y +
Sbjct: 160 VSKESYFNAFDELQQIIAQGDAYEINYCIPFTAKGNISPAATYQRLNKKTPXPFSVYYKF 219
Query: 100 RGCILVASSPEILTRVKKRKITNRPLAGTVRRGKTPKEDLVFEKELLNDEKQCAEHIMLV 159
++++SPE + I ++P+ GT +RGK+ ED +++L EK+ +E+ +V
Sbjct: 220 NTEYILSASPERFIKKTGDTIISQPIKGTSKRGKSKAEDEXLKQQLGTSEKEQSENTXIV 279
Query: 160 DLGRNDXXXXXXXXXXXXEKLMNIEHYSHVMHISSTVTGELLDHLTSWDALRAALPVGTV 219
DL RND +L + + +V + STV + +S D ++ A P G+
Sbjct: 280 DLVRNDLSRTAVAGSVCVPELSGLYTFPNVHQLISTVQSTIDPACSSIDVIQQAFPXGSX 339
Query: 220 SGAPKVKAMELIDELEVTRRGPYSGGFGGISFTGDMDIALALRTIVFPTATR 271
+GAPKV + ID +E RGP+SG G + D + +R+I + +AT+
Sbjct: 340 TGAPKVNVXKFIDRIESXARGPFSGTVGYXDPHDNFDFNVLIRSIFYNSATQ 391
>pdb|2FN0|A Chain A, Crystal Structure Of Yersinia Enterocolitica Salicylate
Synthase (Irp9)
pdb|2FN0|B Chain B, Crystal Structure Of Yersinia Enterocolitica Salicylate
Synthase (Irp9)
pdb|2FN1|A Chain A, Crystal Structures Of Yersinia Enterocolitica Salicylate
Synthase (Irp9) In Complex With The Reaction Products
Salicylate And Pyruvate
pdb|2FN1|B Chain B, Crystal Structures Of Yersinia Enterocolitica Salicylate
Synthase (Irp9) In Complex With The Reaction Products
Salicylate And Pyruvate
Length = 437
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/292 (30%), Positives = 130/292 (44%), Gaps = 21/292 (7%)
Query: 28 TRHFGPKLESSSMTSEAYKEAVLQAKEHILAGDIFQIVLSQRFERRTFAD-PFEIYRALR 86
T P +++ EAYK+ V +A I G+ ++++S+ + D P + +
Sbjct: 161 TTQNAPLAVDTALNGEAYKQQVARAVAEIRRGEYVKVIVSRAIPLPSRIDMPATLLYGRQ 220
Query: 87 IVNPSPYMTYLQARGCILVASSPEILTRVKKRKITNRPLAGTVRRGKTPKEDLVFEKELL 146
P + Q G + SPE++ V K+ PLAGT R P+ + E ELL
Sbjct: 221 ANTPVRSFMFRQ-EGREALGFSPELVMSVTGNKVVTEPLAGTRDRMGNPEHNKAKEAELL 279
Query: 147 NDEKQCAEHIMLVDLGRNDXXXXXXXXXXXXEKLMNIEHYSHVMHISSTVTGELLDHLTS 206
+D K+ EHI+ V + E LM++ V H+ S V+G+L ++ +
Sbjct: 280 HDSKEVLEHILSVKEAIAELEAVCLPGSVVVEDLMSVRQRGSVQHLGSGVSGQLAENKDA 339
Query: 207 WDALRAALPVGTVSGAPKVKAMELIDELEVTRRGPYSGGFGGISFTGDMDIALALRTIVF 266
WDA P T SG PK A+ I ++E T R YSG + T D AL LR++
Sbjct: 340 WDAFTVLFPSITASGIPKNAALNAIMQIEKTPRELYSGAILLLDDT-RFDAALVLRSVF- 397
Query: 267 PTATRYDTMYSYKDVDKRREWIAHLQAGAGIVADSDPNDEQKECENKAAGIA 318
D +R WI QAGAGI+A S P E E K A IA
Sbjct: 398 --------------QDSQRCWI---QAGAGIIAQSTPERELTETREKLASIA 432
>pdb|2I6Y|A Chain A, Structure And Mechanism Of Mycobacterium Tuberculosis
Salicylate Synthase, Mbti
Length = 470
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 105/257 (40%), Gaps = 21/257 (8%)
Query: 44 AYKEAVLQAKEHILAGDIFQIVLSQRFERRTFADPFEI-YRALRIVNPSPYMTYLQARGC 102
++ V A + I AG +++LS+ E FA F + YR R N LQ G
Sbjct: 206 GFRRRVAVAVDEIAAGRYHKVILSRCVEV-PFAIDFPLTYRLGRRHNTPVRSFLLQLGGI 264
Query: 103 ILVASSPEILTRVKKRKIT-NRPLAGTVRRGKTPKEDLVFEKELLNDEKQCAEHIMLVDL 161
+ SPE++T V+ + PLAGT G+ P D + +L ++ K+ EH + V
Sbjct: 265 RALGYSPELVTAVRADGVVITEPLAGTRALGRGPAIDRLARDDLESNSKEIVEHAISVRS 324
Query: 162 GRNDXXXXXXXXXXXXEKLMNIEHYSHVMHISSTVTGELLDHLTSWDALRAALPVGTVSG 221
+ M + V H+ ST+ L AL A P T SG
Sbjct: 325 SLEEITDIAEPGSAAVIDFMTVRERGSVQHLGSTIRARLDPSSDRMAALEALFPAVTASG 384
Query: 222 APKVKAMELIDELEVTRRGPYSGGFGGISFTGDMDIALALRTIVFPTATRYDTMYSYKDV 281
PK +E I L+ RG YSG +S G +D AL LR Y
Sbjct: 385 IPKAAGVEAIFRLDECPRGLYSGAVVMLSADGGLDAALTLR-----------AAYQVGG- 432
Query: 282 DKRREWIAHLQAGAGIV 298
R W L+AGAGI+
Sbjct: 433 ---RTW---LRAGAGII 443
>pdb|3RV8|A Chain A, Structure Of A M. Tuberculosis Salicylate Synthase, Mbti,
In Complex With An Inhibitor With Cyclopropyl R-Group
pdb|3RV8|B Chain B, Structure Of A M. Tuberculosis Salicylate Synthase, Mbti,
In Complex With An Inhibitor With Cyclopropyl R-Group
pdb|3RV8|C Chain C, Structure Of A M. Tuberculosis Salicylate Synthase, Mbti,
In Complex With An Inhibitor With Cyclopropyl R-Group
pdb|3RV8|D Chain D, Structure Of A M. Tuberculosis Salicylate Synthase, Mbti,
In Complex With An Inhibitor With Cyclopropyl R-Group
pdb|3ST6|A Chain A, Structure Of A M. Tuberculosis Synthase, Mbti, In Complex
With An Isochorismate Analogue Inhibitor
pdb|3ST6|B Chain B, Structure Of A M. Tuberculosis Synthase, Mbti, In Complex
With An Isochorismate Analogue Inhibitor
pdb|3ST6|C Chain C, Structure Of A M. Tuberculosis Synthase, Mbti, In Complex
With An Isochorismate Analogue Inhibitor
pdb|3ST6|D Chain D, Structure Of A M. Tuberculosis Synthase, Mbti, In Complex
With An Isochorismate Analogue Inhibitor
Length = 450
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 105/257 (40%), Gaps = 21/257 (8%)
Query: 44 AYKEAVLQAKEHILAGDIFQIVLSQRFERRTFADPFEI-YRALRIVNPSPYMTYLQARGC 102
++ V A + I AG +++LS+ E FA F + YR R N LQ G
Sbjct: 186 GFRRRVAVAVDEIAAGRYHKVILSRCVEV-PFAIDFPLTYRLGRRHNTPVRSFLLQLGGI 244
Query: 103 ILVASSPEILTRVKKRKIT-NRPLAGTVRRGKTPKEDLVFEKELLNDEKQCAEHIMLVDL 161
+ SPE++T V+ + PLAGT G+ P D + +L ++ K+ EH + V
Sbjct: 245 RALGYSPELVTAVRADGVVITEPLAGTRALGRGPAIDRLARDDLESNSKEIVEHAISVRS 304
Query: 162 GRNDXXXXXXXXXXXXEKLMNIEHYSHVMHISSTVTGELLDHLTSWDALRAALPVGTVSG 221
+ M + V H+ ST+ L AL A P T SG
Sbjct: 305 SLEEITDIAEPGSAAVIDFMTVRERGSVQHLGSTIRARLDPSSDRMAALEALFPAVTASG 364
Query: 222 APKVKAMELIDELEVTRRGPYSGGFGGISFTGDMDIALALRTIVFPTATRYDTMYSYKDV 281
PK +E I L+ RG YSG +S G +D AL LR Y
Sbjct: 365 IPKAAGVEAIFRLDECPRGLYSGAVVMLSADGGLDAALTLR-----------AAYQVGG- 412
Query: 282 DKRREWIAHLQAGAGIV 298
R W L+AGAGI+
Sbjct: 413 ---RTW---LRAGAGII 423
>pdb|3LOG|A Chain A, Crystal Structure Of Mbti From Mycobacterium Tuberculosis
pdb|3LOG|B Chain B, Crystal Structure Of Mbti From Mycobacterium Tuberculosis
pdb|3LOG|C Chain C, Crystal Structure Of Mbti From Mycobacterium Tuberculosis
pdb|3LOG|D Chain D, Crystal Structure Of Mbti From Mycobacterium Tuberculosis
pdb|3VEH|A Chain A, Structure Of A M. Tuberculosis Salicylate Synthase, Mbti,
In Complex With An Inhibitor Methylamt
pdb|3VEH|B Chain B, Structure Of A M. Tuberculosis Salicylate Synthase, Mbti,
In Complex With An Inhibitor Methylamt
pdb|3VEH|C Chain C, Structure Of A M. Tuberculosis Salicylate Synthase, Mbti,
In Complex With An Inhibitor Methylamt
pdb|3VEH|D Chain D, Structure Of A M. Tuberculosis Salicylate Synthase, Mbti,
In Complex With An Inhibitor Methylamt
Length = 451
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 105/257 (40%), Gaps = 21/257 (8%)
Query: 44 AYKEAVLQAKEHILAGDIFQIVLSQRFERRTFADPFEI-YRALRIVNPSPYMTYLQARGC 102
++ V A + I AG +++LS+ E FA F + YR R N LQ G
Sbjct: 188 GFRRRVAVAVDEIAAGRYHKVILSRCVEV-PFAIDFPLTYRLGRRHNTPVRSFLLQLGGI 246
Query: 103 ILVASSPEILTRVKKRKIT-NRPLAGTVRRGKTPKEDLVFEKELLNDEKQCAEHIMLVDL 161
+ SPE++T V+ + PLAGT G+ P D + +L ++ K+ EH + V
Sbjct: 247 RALGYSPELVTAVRADGVVITEPLAGTRALGRGPAIDRLARDDLESNSKEIVEHAISVRS 306
Query: 162 GRNDXXXXXXXXXXXXEKLMNIEHYSHVMHISSTVTGELLDHLTSWDALRAALPVGTVSG 221
+ M + V H+ ST+ L AL A P T SG
Sbjct: 307 SLEEITDIAEPGSAAVIDFMTVRERGSVQHLGSTIRARLDPSSDRMAALEALFPAVTASG 366
Query: 222 APKVKAMELIDELEVTRRGPYSGGFGGISFTGDMDIALALRTIVFPTATRYDTMYSYKDV 281
PK +E I L+ RG YSG +S G +D AL LR Y
Sbjct: 367 IPKAAGVEAIFRLDECPRGLYSGAVVMLSADGGLDAALTLR-----------AAYQVGG- 414
Query: 282 DKRREWIAHLQAGAGIV 298
R W L+AGAGI+
Sbjct: 415 ---RTW---LRAGAGII 425
>pdb|2G5F|A Chain A, The Structure Of Mbti From Mycobacterium Tuberculosis, The
First Enzyme In The Synthesis Of Mycobactin, Reveals It
To Be A Salicylate Synthase
pdb|2G5F|B Chain B, The Structure Of Mbti From Mycobacterium Tuberculosis, The
First Enzyme In The Synthesis Of Mycobactin, Reveals It
To Be A Salicylate Synthase
pdb|2G5F|C Chain C, The Structure Of Mbti From Mycobacterium Tuberculosis, The
First Enzyme In The Synthesis Of Mycobactin, Reveals It
To Be A Salicylate Synthase
pdb|2G5F|D Chain D, The Structure Of Mbti From Mycobacterium Tuberculosis, The
First Enzyme In The Synthesis Of Mycobactin, Reveals It
To Be A Salicylate Synthase
pdb|3RV6|A Chain A, Structure Of A M. Tuberculosis Salicylate Synthase, Mbti,
In Complex With An Inhibitor With Phenyl R-Group
pdb|3RV6|B Chain B, Structure Of A M. Tuberculosis Salicylate Synthase, Mbti,
In Complex With An Inhibitor With Phenyl R-Group
pdb|3RV7|A Chain A, Structure Of A M. Tuberculosis Salicylate Synthase, Mbti,
In Complex With An Inhibitor With Isopropyl R-Group
pdb|3RV7|B Chain B, Structure Of A M. Tuberculosis Salicylate Synthase, Mbti,
In Complex With An Inhibitor With Isopropyl R-Group
pdb|3RV7|C Chain C, Structure Of A M. Tuberculosis Salicylate Synthase, Mbti,
In Complex With An Inhibitor With Isopropyl R-Group
pdb|3RV7|D Chain D, Structure Of A M. Tuberculosis Salicylate Synthase, Mbti,
In Complex With An Inhibitor With Isopropyl R-Group
pdb|3RV9|A Chain A, Structure Of A M. Tuberculosis Salicylate Synthase, Mbti,
In Complex With An Inhibitor With Ethyl R-Group
pdb|3RV9|B Chain B, Structure Of A M. Tuberculosis Salicylate Synthase, Mbti,
In Complex With An Inhibitor With Ethyl R-Group
pdb|3RV9|C Chain C, Structure Of A M. Tuberculosis Salicylate Synthase, Mbti,
In Complex With An Inhibitor With Ethyl R-Group
pdb|3RV9|D Chain D, Structure Of A M. Tuberculosis Salicylate Synthase, Mbti,
In Complex With An Inhibitor With Ethyl R-Group
Length = 450
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 105/257 (40%), Gaps = 21/257 (8%)
Query: 44 AYKEAVLQAKEHILAGDIFQIVLSQRFERRTFADPFEI-YRALRIVNPSPYMTYLQARGC 102
++ V A + I AG +++LS+ E FA F + YR R N LQ G
Sbjct: 186 GFRRRVAVAVDEIAAGRYHKVILSRCVEV-PFAIDFPLTYRLGRRHNTPVRSFLLQLGGI 244
Query: 103 ILVASSPEILTRVKKRKIT-NRPLAGTVRRGKTPKEDLVFEKELLNDEKQCAEHIMLVDL 161
+ SPE++T V+ + PLAGT G+ P D + +L ++ K+ EH + V
Sbjct: 245 RALGYSPELVTAVRADGVVITEPLAGTRALGRGPAIDRLARDDLESNSKEIVEHAISVRS 304
Query: 162 GRNDXXXXXXXXXXXXEKLMNIEHYSHVMHISSTVTGELLDHLTSWDALRAALPVGTVSG 221
+ M + V H+ ST+ L AL A P T SG
Sbjct: 305 SLEEITDIAEPGSAAVIDFMTVRERGSVQHLGSTIRARLDPSSDRMAALEALFPAVTASG 364
Query: 222 APKVKAMELIDELEVTRRGPYSGGFGGISFTGDMDIALALRTIVFPTATRYDTMYSYKDV 281
PK +E I L+ RG YSG +S G +D AL LR Y
Sbjct: 365 IPKAAGVEAIFRLDECPRGLYSGAVVMLSADGGLDAALTLR-----------AAYQVGG- 412
Query: 282 DKRREWIAHLQAGAGIV 298
R W L+AGAGI+
Sbjct: 413 ---RTW---LRAGAGII 423
>pdb|3OS6|A Chain A, Crystal Structure Of Putative
2,3-Dihydroxybenzoate-Specific Isochorismate Synthase,
Dhbc From Bacillus Anthracis.
pdb|3OS6|B Chain B, Crystal Structure Of Putative
2,3-Dihydroxybenzoate-Specific Isochorismate Synthase,
Dhbc From Bacillus Anthracis.
pdb|3OS6|C Chain C, Crystal Structure Of Putative
2,3-Dihydroxybenzoate-Specific Isochorismate Synthase,
Dhbc From Bacillus Anthracis.
pdb|3OS6|D Chain D, Crystal Structure Of Putative
2,3-Dihydroxybenzoate-Specific Isochorismate Synthase,
Dhbc From Bacillus Anthracis
Length = 399
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 127/298 (42%), Gaps = 29/298 (9%)
Query: 43 EAYKEAVLQAKEHILAGDIFQIVLSQRFERRTFA--DPFEIYRALRIVNPSPYMTYLQ-- 98
E Y + V Q E I GD+ +IVLS+ + ++ D ++ R L N Y +
Sbjct: 122 EVYXKGVKQGIEKIKDGDLKKIVLSRSLDVKSSGKIDKQKLLRELAEHNKHGYTFAVNLP 181
Query: 99 ----ARGCILVASSPEILTRVKKRKITNRPLAGTVRRGKTPKEDLVFEKELLNDEKQCAE 154
L+ +SPE+L ++ + PLAG+ R P ED +ELL+ K E
Sbjct: 182 KDENENSKTLIGASPELLVSRHGXQVISNPLAGSRPRSDDPVEDKRRAEELLSSPKDLHE 241
Query: 155 HIMLVDLGRNDXXXXXXXXXXXXEKLMNIEHYSHVMHISSTVTGELLDHLTSWDALRAAL 214
H ++V+ + ++ H H+S+ V GEL + TS L AL
Sbjct: 242 HAVVVEAVAAALRPYCHTLYVPEKP--SVIHSEAXWHLSTEVKGELKNPNTSSLELAIAL 299
Query: 215 -PVGTVSGAPKVKAMELIDELEVTRRGPYSGGFGGISFTGDMDIALALRTIVFPTATRYD 273
P V G P +A E I ++E R ++G G GD + + +R + +
Sbjct: 300 HPTPAVCGTPXEEAREAIQKIEPFDREFFTGXLGWSDLNGDGEWIVTIRC----AEVQEN 355
Query: 274 TMYSYKDVDKRREWIAHLQAGAGIVADSDPNDEQKECENKAAGIARAIDLAESSFVDK 331
T+ Y AGAG+VA+S P DE E K +A+ L +SS +K
Sbjct: 356 TLRLY--------------AGAGVVAESKPEDELAETSAKFQTXLKALGLNDSSLNEK 399
>pdb|3GSE|A Chain A, Crystal Structure Of Menaquinone-specific Isochorismate
Synthase From Yersinia Pestis Co92
Length = 458
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 96/215 (44%), Gaps = 25/215 (11%)
Query: 104 LVASSPEILTRVKKRKITNRPLAGTVRRGKTPKEDLVFEKELLNDEKQCAEHIMLVDLGR 163
+ SSPE L ++ + LAGTV + + V L++DEK E++++VD
Sbjct: 255 FLGSSPERLYLRQQLHLETEALAGTVSNLDSDPQAAVLADWLMHDEKNQRENLLVVD--- 311
Query: 164 NDXXXXXXXXXXXXEKLM-NIEHYSHVMHISSTVTGELLDHLTSWDALRAALPVGTVSGA 222
D + + I V H+ + +L + D L+ P V+G
Sbjct: 312 -DICQRLQGGVTAVDVMPPEIIRLRKVQHLRRRICAQL-SRASDTDCLQRLQPTAAVAGL 369
Query: 223 PKVKAMELIDELEVTRRGPYSGGFGGISFTGDMDIALALRTIVFPTATRYDTMYSYKDVD 282
P+ A + I + E+ RG Y+G G +S + ++ALR+ VD
Sbjct: 370 PREAARQFIAKHELFSRGWYAGSAGYLSLK-RTEFSVALRS---------------ARVD 413
Query: 283 KRREWIAHLQAGAGIVADSDPNDEQKECENKAAGI 317
++ HL AGAGIVA SD E +E +NK+AG+
Sbjct: 414 GQQ---IHLYAGAGIVAGSDAEQEWQEIDNKSAGL 445
>pdb|2EUA|A Chain A, Structure And Mechanism Of Menf, The Menaquinone-Specific
Isochorismate Synthase From Escherichia Coli
pdb|2EUA|B Chain B, Structure And Mechanism Of Menf, The Menaquinone-Specific
Isochorismate Synthase From Escherichia Coli
pdb|3BZM|A Chain A, Crystal Structure Of Open Form Of Menaquinone-Specific
Isochorismate Synthase, Menf
pdb|3BZN|A Chain A, Crystal Structure Of Open Form Of Menaquinone-Specific
Isochorismate Synthase, Menf
Length = 431
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 112/278 (40%), Gaps = 28/278 (10%)
Query: 44 AYKEAVLQAKEHILAGDIFQIVLSQRFERRTFADPFEIYRAL---RIVNPSPYMTYLQAR 100
+ + + A + I G++ ++VL+ R FA P + R +N + Y Y+
Sbjct: 171 GWTQLIELATKTIAEGELDKVVLA-RATDLHFASPVNAAAMMAASRRLNLNCYHFYMAFD 229
Query: 101 G-CILVASSPEILTRVKKRKITNRPLAGTVRRGKTPKEDLVFEKELLNDEKQCAEHIMLV 159
G + SSPE L R + + + LAGTV K+ + L+ D+K E++++V
Sbjct: 230 GENAFLGSSPERLWRRRDKALRTEALAGTVANNPDDKQAQQLGEWLMADDKNQRENMLVV 289
Query: 160 DLGRNDXXXXXXXXXXXXEKLMNIEHYSHVMHISSTVTGELLDHLTSWDALRAALPVGTV 219
+ +++ + H+ T + D + L P V
Sbjct: 290 EDICQRLQADTQTLDVLPPQVLRLRKVQHLRRCIWTSLNKADDVI----CLHQLQPTAAV 345
Query: 220 SGAPKVKAMELIDELEVTRRGPYSGGFGGISFTGDMDIALALRTIVFPTATRYDTMYSYK 279
+G P+ A + I E R Y+G G +S + ++LR+
Sbjct: 346 AGLPRDLARQFIARHEPFTREWYAGSAGYLSLQ-QSEFCVSLRSAKISGN---------- 394
Query: 280 DVDKRREWIAHLQAGAGIVADSDPNDEQKECENKAAGI 317
+ L AGAGIV SDP E +E +NKAAG+
Sbjct: 395 --------VVRLYAGAGIVRGSDPEQEWQEIDNKAAGL 424
>pdb|3HWO|A Chain A, Crystal Structure Of Escherichia Coli
Enterobactin-Specific Isochorismate Synthase Entc In
Complex With Isochorismate
pdb|3HWO|B Chain B, Crystal Structure Of Escherichia Coli
Enterobactin-Specific Isochorismate Synthase Entc In
Complex With Isochorismate
Length = 394
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 92/238 (38%), Gaps = 53/238 (22%)
Query: 89 NPSPYMTYLQ-ARGCILVASSPEILTRVKKRKITNRPLAGTVRRGKTPKEDLVFEKE--- 144
NP Y ++ A G +L+ +SPE+L R + ++ PLAG+ RR + D V ++E
Sbjct: 178 NPVSYNFHVPLADGGVLLGASPELLLRKDGERFSSIPLAGSARR----QPDEVLDREAGN 233
Query: 145 -LLNDEKQCAEHIMLVDLGRNDXXXXXXXXXXXXEKLMNIEHYSHVMHISSTVTGELLDH 203
LL EK EH ++ E L HV +T L H
Sbjct: 234 RLLASEKDRHEHELVTQ--------------AMKEVLRERSSELHVPSSPQLITTPTLWH 279
Query: 204 L---------TSWDALRAAL---PVGTVSGAPKVKAMELIDELEVTRRGPYSGGFGGISF 251
L + +AL A P +SG P A ++I ELE R + G G
Sbjct: 280 LATPFEGKANSQENALTLACLLHPTPALSGFPHQAATQVIAELEPFDRELFGGIVGWCDS 339
Query: 252 TGDMDIALALRTIVFPTATRYDTMYSYKDVDKRREWIAHLQAGAGIVADSDPNDEQKE 309
G+ + + +R K RE L AGAGIV S P E +E
Sbjct: 340 EGNGEWVVTIRCA------------------KLRENQVRLFAGAGIVPASSPLGEWRE 379
>pdb|3VE0|A Chain A, Crystal Structure Of Sudan Ebolavirus Glycoprotein (Strain
Boniface) Bound To 16f6
Length = 220
Score = 32.7 bits (73), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query: 243 SGGFGGISFTGDMDIALALRTIVFPTATRYDTMYSYKDVDKRREWIAHLQAGAG 296
SGG G ++ G + ++ A F YD + ++ +KR EW+A++ +G G
Sbjct: 7 SGG-GLVTPGGSLKLSCAASGFAF---NYYDMFWVRQNTEKRLEWVAYINSGGG 56
>pdb|3S88|H Chain H, Crystal Structure Of Sudan Ebolavirus Glycoprotein (Strain
Gulu) Bound To 16f6
Length = 220
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query: 243 SGGFGGISFTGDMDIALALRTIVFPTATRYDTMYSYKDVDKRREWIAHLQAGAG 296
SGG G ++ G + ++ A F YD + ++ +KR EW+A++ +G G
Sbjct: 7 SGG-GLVTPGGSLKLSCAASGFAF---NYYDMFWVRQNTEKRLEWVAYINSGGG 56
>pdb|1F4W|H Chain H, Crystal Structure Of An Anti-Carbohydrate Antibody
Directed Against Vibrio Cholerae O1 In Complex With
Antigen
pdb|1F4X|H Chain H, Crystal Structure Of An Anti-Carbohydrate Antibody
Directed Against Vibrio Cholerae O1 In Complex With
Antigen
pdb|1F4Y|H Chain H, Crystal Structure Of An Anti-Carbohydrate Antibody
Directed Against Vibrio Cholerae O1 In Complex With
Antigen
Length = 216
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query: 243 SGGFGGISFTGDMDIALALRTIVFPTATRYDTMYSYKDVDKRREWIAHLQAGAG 296
SGG G ++ G + ++ A VF T YD + + +KR EW+A + +G G
Sbjct: 7 SGG-GLVTPGGSLRLSCAASGYVFST---YDMSWVRQTPEKRLEWVAFISSGGG 56
>pdb|2ZUQ|C Chain C, Crystal Structure Of Dsbb-Fab Complex
pdb|2ZUQ|F Chain F, Crystal Structure Of Dsbb-Fab Complex
pdb|2LTQ|C Chain C, High Resolution Structure Of Dsbb C41s By Joint
Calculation With Solid-state Nmr And X-ray Data
pdb|2LTQ|F Chain F, High Resolution Structure Of Dsbb C41s By Joint
Calculation With Solid-state Nmr And X-ray Data
Length = 221
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Query: 243 SGGFGGISFTGDMDIALALRTIVFPTATRYDTMYSYKDVDKRREWIAHLQAGAG 296
SGG G + G + ++ A F + YD + + +KR EW+A++ +G G
Sbjct: 7 SGG-GLVKPGGSLKLSCAASGFAF---SSYDMSWVRQTPEKRLEWVAYISSGGG 56
>pdb|1U6I|A Chain A, The Structure Of Native Coenzyme F420-Dependent
Methylenetetrahydromethanopterin Dehydrogenase At 2.2a
Resolution
pdb|1U6I|B Chain B, The Structure Of Native Coenzyme F420-Dependent
Methylenetetrahydromethanopterin Dehydrogenase At 2.2a
Resolution
pdb|1U6I|C Chain C, The Structure Of Native Coenzyme F420-Dependent
Methylenetetrahydromethanopterin Dehydrogenase At 2.2a
Resolution
pdb|1U6I|D Chain D, The Structure Of Native Coenzyme F420-Dependent
Methylenetetrahydromethanopterin Dehydrogenase At 2.2a
Resolution
pdb|1U6I|E Chain E, The Structure Of Native Coenzyme F420-Dependent
Methylenetetrahydromethanopterin Dehydrogenase At 2.2a
Resolution
pdb|1U6I|F Chain F, The Structure Of Native Coenzyme F420-Dependent
Methylenetetrahydromethanopterin Dehydrogenase At 2.2a
Resolution
pdb|1U6I|G Chain G, The Structure Of Native Coenzyme F420-Dependent
Methylenetetrahydromethanopterin Dehydrogenase At 2.2a
Resolution
pdb|1U6I|H Chain H, The Structure Of Native Coenzyme F420-Dependent
Methylenetetrahydromethanopterin Dehydrogenase At 2.2a
Resolution
pdb|1U6I|I Chain I, The Structure Of Native Coenzyme F420-Dependent
Methylenetetrahydromethanopterin Dehydrogenase At 2.2a
Resolution
pdb|1U6I|J Chain J, The Structure Of Native Coenzyme F420-Dependent
Methylenetetrahydromethanopterin Dehydrogenase At 2.2a
Resolution
pdb|1U6I|K Chain K, The Structure Of Native Coenzyme F420-Dependent
Methylenetetrahydromethanopterin Dehydrogenase At 2.2a
Resolution
pdb|1U6I|L Chain L, The Structure Of Native Coenzyme F420-Dependent
Methylenetetrahydromethanopterin Dehydrogenase At 2.2a
Resolution
pdb|1U6J|A Chain A, The Structure Of Native Coenzyme F420-Dependent
Methylenetetrahydromethanopterin Dehydrogenase At 2.4a
Resolution
pdb|1U6J|B Chain B, The Structure Of Native Coenzyme F420-Dependent
Methylenetetrahydromethanopterin Dehydrogenase At 2.4a
Resolution
pdb|1U6J|C Chain C, The Structure Of Native Coenzyme F420-Dependent
Methylenetetrahydromethanopterin Dehydrogenase At 2.4a
Resolution
pdb|1U6J|D Chain D, The Structure Of Native Coenzyme F420-Dependent
Methylenetetrahydromethanopterin Dehydrogenase At 2.4a
Resolution
pdb|1U6J|E Chain E, The Structure Of Native Coenzyme F420-Dependent
Methylenetetrahydromethanopterin Dehydrogenase At 2.4a
Resolution
pdb|1U6J|F Chain F, The Structure Of Native Coenzyme F420-Dependent
Methylenetetrahydromethanopterin Dehydrogenase At 2.4a
Resolution
pdb|1U6J|G Chain G, The Structure Of Native Coenzyme F420-Dependent
Methylenetetrahydromethanopterin Dehydrogenase At 2.4a
Resolution
pdb|1U6J|H Chain H, The Structure Of Native Coenzyme F420-Dependent
Methylenetetrahydromethanopterin Dehydrogenase At 2.4a
Resolution
pdb|1U6J|I Chain I, The Structure Of Native Coenzyme F420-Dependent
Methylenetetrahydromethanopterin Dehydrogenase At 2.4a
Resolution
pdb|1U6J|J Chain J, The Structure Of Native Coenzyme F420-Dependent
Methylenetetrahydromethanopterin Dehydrogenase At 2.4a
Resolution
pdb|1U6J|K Chain K, The Structure Of Native Coenzyme F420-Dependent
Methylenetetrahydromethanopterin Dehydrogenase At 2.4a
Resolution
pdb|1U6J|L Chain L, The Structure Of Native Coenzyme F420-Dependent
Methylenetetrahydromethanopterin Dehydrogenase At 2.4a
Resolution
pdb|3IQE|A Chain A, Structure Of F420 Dependent
Methylene-Tetrahydromethanopterin Dehydrogenase In
Complex With Methylene-Tetrahydromethanopterin And
Coenzyme F420
pdb|3IQE|B Chain B, Structure Of F420 Dependent
Methylene-Tetrahydromethanopterin Dehydrogenase In
Complex With Methylene-Tetrahydromethanopterin And
Coenzyme F420
pdb|3IQE|C Chain C, Structure Of F420 Dependent
Methylene-Tetrahydromethanopterin Dehydrogenase In
Complex With Methylene-Tetrahydromethanopterin And
Coenzyme F420
pdb|3IQE|D Chain D, Structure Of F420 Dependent
Methylene-Tetrahydromethanopterin Dehydrogenase In
Complex With Methylene-Tetrahydromethanopterin And
Coenzyme F420
pdb|3IQE|E Chain E, Structure Of F420 Dependent
Methylene-Tetrahydromethanopterin Dehydrogenase In
Complex With Methylene-Tetrahydromethanopterin And
Coenzyme F420
pdb|3IQE|F Chain F, Structure Of F420 Dependent
Methylene-Tetrahydromethanopterin Dehydrogenase In
Complex With Methylene-Tetrahydromethanopterin And
Coenzyme F420
pdb|3IQF|A Chain A, Structure Of F420 Dependent
Methylene-Tetrahydromethanopterin Dehydrogenase In
Complex With Methenyl-Tetrahydromethanopterin
pdb|3IQF|B Chain B, Structure Of F420 Dependent
Methylene-Tetrahydromethanopterin Dehydrogenase In
Complex With Methenyl-Tetrahydromethanopterin
pdb|3IQF|C Chain C, Structure Of F420 Dependent
Methylene-Tetrahydromethanopterin Dehydrogenase In
Complex With Methenyl-Tetrahydromethanopterin
pdb|3IQF|D Chain D, Structure Of F420 Dependent
Methylene-Tetrahydromethanopterin Dehydrogenase In
Complex With Methenyl-Tetrahydromethanopterin
pdb|3IQF|E Chain E, Structure Of F420 Dependent
Methylene-Tetrahydromethanopterin Dehydrogenase In
Complex With Methenyl-Tetrahydromethanopterin
pdb|3IQF|F Chain F, Structure Of F420 Dependent
Methylene-Tetrahydromethanopterin Dehydrogenase In
Complex With Methenyl-Tetrahydromethanopterin
pdb|3IQF|G Chain G, Structure Of F420 Dependent
Methylene-Tetrahydromethanopterin Dehydrogenase In
Complex With Methenyl-Tetrahydromethanopterin
pdb|3IQF|H Chain H, Structure Of F420 Dependent
Methylene-Tetrahydromethanopterin Dehydrogenase In
Complex With Methenyl-Tetrahydromethanopterin
pdb|3IQF|I Chain I, Structure Of F420 Dependent
Methylene-Tetrahydromethanopterin Dehydrogenase In
Complex With Methenyl-Tetrahydromethanopterin
pdb|3IQF|J Chain J, Structure Of F420 Dependent
Methylene-Tetrahydromethanopterin Dehydrogenase In
Complex With Methenyl-Tetrahydromethanopterin
pdb|3IQF|K Chain K, Structure Of F420 Dependent
Methylene-Tetrahydromethanopterin Dehydrogenase In
Complex With Methenyl-Tetrahydromethanopterin
pdb|3IQF|L Chain L, Structure Of F420 Dependent
Methylene-Tetrahydromethanopterin Dehydrogenase In
Complex With Methenyl-Tetrahydromethanopterin
pdb|3IQZ|A Chain A, Structure Of F420 Dependent
Methylene-tetrahydromethanopterin Dehydrogenase In
Complex With Methylene-tetrahydromethanopterin
pdb|3IQZ|B Chain B, Structure Of F420 Dependent
Methylene-tetrahydromethanopterin Dehydrogenase In
Complex With Methylene-tetrahydromethanopterin
pdb|3IQZ|C Chain C, Structure Of F420 Dependent
Methylene-tetrahydromethanopterin Dehydrogenase In
Complex With Methylene-tetrahydromethanopterin
pdb|3IQZ|D Chain D, Structure Of F420 Dependent
Methylene-tetrahydromethanopterin Dehydrogenase In
Complex With Methylene-tetrahydromethanopterin
pdb|3IQZ|E Chain E, Structure Of F420 Dependent
Methylene-tetrahydromethanopterin Dehydrogenase In
Complex With Methylene-tetrahydromethanopterin
pdb|3IQZ|F Chain F, Structure Of F420 Dependent
Methylene-tetrahydromethanopterin Dehydrogenase In
Complex With Methylene-tetrahydromethanopterin
Length = 283
Score = 28.9 bits (63), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 16/68 (23%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 40 MTSEAYKEAVLQAKE-HILAGDIFQIVLSQR--FERRTFADPFEIYRALRIVNPSPYMTY 96
+ EA+ E + +AKE I D+ ++V+ + ER F +P+ + +A+ + + +
Sbjct: 156 VVQEAFDELIEKAKEDEISENDLPKLVIDRNTLLEREEFENPYAMVKAMAALEIAENVAD 215
Query: 97 LQARGCIL 104
+ GC +
Sbjct: 216 VSVEGCFV 223
>pdb|3R75|A Chain A, Crystal Structure Of 2-Amino-2-Desoxyisochorismate
Synthase (Adic) Synthase Phze From Burkholderia Lata 383
In Complex With Benzoate, Pyruvate, Glutamine And
Contaminating Zn2+
pdb|3R75|B Chain B, Crystal Structure Of 2-Amino-2-Desoxyisochorismate
Synthase (Adic) Synthase Phze From Burkholderia Lata 383
In Complex With Benzoate, Pyruvate, Glutamine And
Contaminating Zn2+
pdb|3R76|A Chain A, Crystal Structure Of 2-Amino-2-Desoxyisochorismate
Synthase (Adic) Synthase Phze From Burkholderia Lata 383
In Complex With Benzoate, Pyruvate And Glutamine
pdb|3R76|B Chain B, Crystal Structure Of 2-Amino-2-Desoxyisochorismate
Synthase (Adic) Synthase Phze From Burkholderia Lata 383
In Complex With Benzoate, Pyruvate And Glutamine
Length = 645
Score = 28.1 bits (61), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 92/238 (38%), Gaps = 46/238 (19%)
Query: 104 LVASSPEILTRVKKRKITNRPLAGTVRRGKT-PKEDLVFEKELLNDEKQCAEHIMLVD-- 160
V ++PE + + T P++GT R ++ P D + L D K+ E M++D
Sbjct: 197 FVGATPERHLTLHEGCATMNPISGTYRYPQSGPTIDGI--NAFLGDRKESDELYMVLDEE 254
Query: 161 ---LGRNDXXXXXXXXXXXXE--KLMNIEHYSHVMHISSTVTGELLDHLTSWDALRAALP 215
+ R E +L + E++ V H + V D LR +
Sbjct: 255 LKMMARICPAGGQVTGPHLREMARLAHTEYFI-VGHTEADVR----------DLLRETMF 303
Query: 216 VGTVSGAPKVKAMELIDELEVTRRGPYSG--GFGGISFTGD--MDIALALRTIVFPTATR 271
TV+G+P A +I E RG YSG G G +D A+ +RT
Sbjct: 304 APTVTGSPIESATRVIARHERAGRGYYSGIAALIGRDARGGRTLDSAILIRT-------- 355
Query: 272 YDTMYSYKDVDKRREWIAHLQAGAG--IVADSDPNDEQKECENKAAGIARAIDLAESS 327
++D+ H++ G G +V SD E E K A ++ A D E+
Sbjct: 356 -------AEIDR----AGHVRIGVGSTLVRHSDAVSEVMETHAKVAALSNAFDPPEAG 402
>pdb|3R74|A Chain A, Crystal Structure Of 2-Amino-2-Desoxyisochorismate
Synthase (Adic) Synthase Phze From Burkholderia Lata 383
pdb|3R74|B Chain B, Crystal Structure Of 2-Amino-2-Desoxyisochorismate
Synthase (Adic) Synthase Phze From Burkholderia Lata 383
Length = 645
Score = 28.1 bits (61), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 92/238 (38%), Gaps = 46/238 (19%)
Query: 104 LVASSPEILTRVKKRKITNRPLAGTVRRGKT-PKEDLVFEKELLNDEKQCAEHIMLVD-- 160
V ++PE + + T P++GT R ++ P D + L D K+ E M++D
Sbjct: 197 FVGATPERHLTLHEGCATMNPISGTYRYPQSGPTIDGI--NAFLGDRKESDELYMVLDEE 254
Query: 161 ---LGRNDXXXXXXXXXXXXE--KLMNIEHYSHVMHISSTVTGELLDHLTSWDALRAALP 215
+ R E +L + E++ V H + V D LR +
Sbjct: 255 LKMMARICPAGGQVTGPHLREMARLAHTEYFI-VGHTEADVR----------DLLRETMF 303
Query: 216 VGTVSGAPKVKAMELIDELEVTRRGPYSG--GFGGISFTGD--MDIALALRTIVFPTATR 271
TV+G+P A +I E RG YSG G G +D A+ +RT
Sbjct: 304 APTVTGSPIESATRVIARHERAGRGYYSGIAALIGRDARGGRTLDSAILIRT-------- 355
Query: 272 YDTMYSYKDVDKRREWIAHLQAGAG--IVADSDPNDEQKECENKAAGIARAIDLAESS 327
++D+ H++ G G +V SD E E K A ++ A D E+
Sbjct: 356 -------AEIDR----AGHVRIGVGSTLVRHSDAVSEVMETHAKVAALSNAFDPPEAG 402
>pdb|4AWE|A Chain A, The Crystal Structure Of Chrysonilia Sitophila
Endo-Beta-D- 1,4-Mannanase
Length = 387
Score = 28.1 bits (61), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 7/61 (11%)
Query: 240 GPYSGGFGGISFTGDMDIALALRTIVFPTATRYDTMYSYKDVDKRREWIAHLQAGAGIVA 299
G Y+G GG D D L LR + F T Y +S K ++ +WI H A +G A
Sbjct: 241 GFYNGADGG-----DFDRELGLRNVDFGTMHLYPDWWS-KSIEWSNQWI-HDHAASGRAA 293
Query: 300 D 300
+
Sbjct: 294 N 294
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.135 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,185,503
Number of Sequences: 62578
Number of extensions: 353549
Number of successful extensions: 821
Number of sequences better than 100.0: 29
Number of HSP's better than 100.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 773
Number of HSP's gapped (non-prelim): 30
length of query: 331
length of database: 14,973,337
effective HSP length: 99
effective length of query: 232
effective length of database: 8,778,115
effective search space: 2036522680
effective search space used: 2036522680
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)