RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= 020074
(331 letters)
>d1qdla_ d.161.1.1 (A:) Anthranilate synthase
aminodeoxyisochorismate synthase/lyase subunit, TrpE
{Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Length = 422
Score = 216 bits (551), Expect = 6e-68
Identities = 124/285 (43%), Positives = 165/285 (57%), Gaps = 18/285 (6%)
Query: 39 SMTSEAYKEAVLQAKEHILAGDIFQIVLSQRFERRTFADPFEIYRALRIVNPSPYMTYLQ 98
S+ +Y+ V ++ E+I +G IFQ+VLS+ + DP IY LR +NPSPYM YL+
Sbjct: 155 SLNKNSYERIVSESLEYIRSGYIFQVVLSRFYRYIFSGDPLRIYYNLRRINPSPYMFYLK 214
Query: 99 ARGCILVASSPEILTRVKKRKITNRPLAGTVRRGKTPKEDLVFEKELLNDEKQCAEHIML 158
L+ SSPE+L RV+ + P+AGT RG +EDL E EL+N EK AEH+ML
Sbjct: 215 FDEKYLIGSSPELLFRVQDNIVETYPIAGTRPRGADQEEDLKLELELMNSEKDKAEHLML 274
Query: 159 VDLGRNDVGKVSKSGSVKVEKLMNIEHYSHVMHISSTVTGELLDHLTSWDALRAALPVGT 218
VDL RND+GKV G+VKV +LM +E YSHV HI S V G L + + L A P GT
Sbjct: 275 VDLARNDLGKVCVPGTVKVPELMYVEKYSHVQHIVSKVIGTLKKKYNALNVLSATFPAGT 334
Query: 219 VSGAPKVKAMELIDELEVTRRGPYSGGFGGISFTGDMDIALALRTIVFPTATRYDTMYSY 278
VSGAPK AM +I+ LE +RGPY+G G IS G+ + A+A+RT
Sbjct: 335 VSGAPKPMAMNIIETLEEYKRGPYAGAVGFISADGNAEFAIAIRTAFL------------ 382
Query: 279 KDVDKRREWIAHLQAGAGIVADSDPNDEQKECENKAAGIARAIDL 323
+ + + AGAGIV DS+P E E E+K + AI +
Sbjct: 383 ------NKELLRIHAGAGIVYDSNPESEYFETEHKLKALKTAIGV 421
>d2fn0a1 d.161.1.1 (A:2-434) Salicylate synthetase Irp9 {Yersinia
enterocolitica [TaxId: 630]}
Length = 433
Score = 215 bits (548), Expect = 2e-67
Identities = 90/297 (30%), Positives = 133/297 (44%), Gaps = 19/297 (6%)
Query: 27 HTRHFGPKLESSSMTSEAYKEAVLQAKEHILAGDIFQIVLSQRFERRTFADPFEIYRALR 86
T P +++ EAYK+ V +A I G+ ++++S+ + D R
Sbjct: 156 TTTQNAPLAVDTALNGEAYKQQVARAVAEIRRGEYVKVIVSRAIPLPSRIDMPATLLYGR 215
Query: 87 IVNPSPYMTYLQARGCILVASSPEILTRVKKRKITNRPLAGTVRRGKTPKEDLVFEKELL 146
N + G + SPE++ V K+ PLAGT R P+ + E ELL
Sbjct: 216 QANTPVRSFMFRQEGREALGFSPELVMSVTGNKVVTEPLAGTRDRMGNPEHNKAKEAELL 275
Query: 147 NDEKQCAEHIMLVDLGRNDVGKVSKSGSVKVEKLMNIEHYSHVMHISSTVTGELLDHLTS 206
+D K+ EHI+ V ++ V GSV VE LM++ V H+ S V+G+L ++ +
Sbjct: 276 HDSKEVLEHILSVKEAIAELEAVCLPGSVVVEDLMSVRQRGSVQHLGSGVSGQLAENKDA 335
Query: 207 WDALRAALPVGTVSGAPKVKAMELIDELEVTRRGPYSGGFGGISFTGDMDIALALRTIVF 266
WDA P T SG PK A+ I ++E T R YSG + D AL LR++
Sbjct: 336 WDAFTVLFPSITASGIPKNAALNAIMQIEKTPRELYSGAILLLDD-TRFDAALVLRSVF- 393
Query: 267 PTATRYDTMYSYKDVDKRREWIAHLQAGAGIVADSDPNDEQKECENKAAGIARAIDL 323
D +R +QAGAGI+A S P E E K A IA + +
Sbjct: 394 --------------QDSQR---CWIQAGAGIIAQSTPERELTETREKLASIAPYLMV 433
>d3bzna1 d.161.1.1 (A:2-429) Menaquinone-specific isochorismate
synthase MenF {Escherichia coli [TaxId: 562]}
Length = 428
Score = 211 bits (539), Expect = 5e-66
Identities = 66/295 (22%), Positives = 120/295 (40%), Gaps = 26/295 (8%)
Query: 30 HFGPKLESSSMTSEAYKEAVLQAKEHILAGDIFQIVLSQRFERRTFA--DPFEIYRALRI 87
H E + + + A + I G++ ++VL++ + + + + A R
Sbjct: 156 HLTTTREQHWPDKTGWTQLIELATKTIAEGELDKVVLARATDLHFASPVNAAAMMAASRR 215
Query: 88 VNPSPYMTYLQARGC-ILVASSPEILTRVKKRKITNRPLAGTVRRGKTPKEDLVFEKELL 146
+N + Y Y+ G + SSPE L R + + + LAGTV K+ + L+
Sbjct: 216 LNLNCYHFYMAFDGENAFLGSSPERLWRRRDKALRTEALAGTVANNPDDKQAQQLGEWLM 275
Query: 147 NDEKQCAEHIMLVDLGRNDVGKVSKSGSVKVEKLMNIEHYSHVMHISSTVTGELLDHLTS 206
D+K E++++V+ + +++ V +++ + H+ T L+
Sbjct: 276 ADDKNQRENMLVVEDICQRLQADTQTLDVLPPQVLRLRKVQHLRRCIWTS----LNKADD 331
Query: 207 WDALRAALPVGTVSGAPKVKAMELIDELEVTRRGPYSGGFGGISFTGDMDIALALRTIVF 266
L P V+G P+ A + I E R Y+G G +S + ++LR+
Sbjct: 332 VICLHQLQPTAAVAGLPRDLARQFIARHEPFTREWYAGSAGYLSL-QQSEFCVSLRSAKI 390
Query: 267 PTATRYDTMYSYKDVDKRREWIAHLQAGAGIVADSDPNDEQKECENKAAGIARAI 321
+ L AGAGIV SDP E +E +NKAAG+ +
Sbjct: 391 ------------------SGNVVRLYAGAGIVRGSDPEQEWQEIDNKAAGLRTLL 427
>d1k0ga_ d.161.1.1 (A:) P-aminobenzoate synthase component I
{Escherichia coli [TaxId: 562]}
Length = 453
Score = 189 bits (480), Expect = 4e-57
Identities = 104/311 (33%), Positives = 160/311 (51%), Gaps = 18/311 (5%)
Query: 12 HDIVPPRLRKGSIKLHTRHFGPKLESSSMTSEAYKEAVLQAKEHILAGDIFQIVLSQRFE 71
+ L S+MT E Y E Q +E++ +GD +Q+ L+QRF
Sbjct: 160 VNARRAWLESQQFSPQEDFTLTSDWQSNMTREQYGEKFRQVQEYLHSGDCYQVNLAQRFH 219
Query: 72 RRTFADPFEIYRALRIVNPSPYMTYLQARGCILVASSPEILTRVKKRKITNRPLAGTVRR 131
D ++ + L N +P+ +L+ +++ SPE +I RP+ GT+ R
Sbjct: 220 ATYSGDEWQAFLQLNQANRAPFSAFLRLEQGAILSLSPERFILCDNSEIQTRPIKGTLPR 279
Query: 132 GKTPKEDLVFEKELLNDEKQCAEHIMLVDLGRNDVGKVSKSGSVKVEKLMNIEHYSHVMH 191
P+ED +L N K AE++M+VDL RND+G+V+ +GSVKV +L +E + V H
Sbjct: 280 LPDPQEDSKQAVKLANSAKDRAENLMIVDLMRNDIGRVAVAGSVKVPELFVVEPFPAVHH 339
Query: 192 ISSTVTGELLDHLTSWDALRAALPVGTVSGAPKVKAMELIDELEVTRRGPYSGGFGGISF 251
+ ST+T +L + L + D LRAA P G+++GAPKV+AME+IDELE RR + G G +SF
Sbjct: 340 LVSTITAQLPEQLHASDLLRAAFPGGSITGAPKVRAMEIIDELEPQRRNAWCGSIGYLSF 399
Query: 252 TGDMDIALALRTIVFPTATRYDTMYSYKDVDKRREWIAHLQAGAGIVADSDPNDEQKECE 311
G+MD ++ +RT+ AG GIVADS E +E
Sbjct: 400 CGNMDTSITIRTLTA------------------INGQIFCSAGGGIVADSQEEAEYQETF 441
Query: 312 NKAAGIARAID 322
+K I + ++
Sbjct: 442 DKVNRILKQLE 452
>d1i7qa_ d.161.1.1 (A:) Anthranilate synthase
aminodeoxyisochorismate synthase/lyase subunit, TrpE
{Serratia marcescens [TaxId: 615]}
Length = 517
Score = 190 bits (482), Expect = 8e-57
Identities = 107/299 (35%), Positives = 152/299 (50%), Gaps = 27/299 (9%)
Query: 37 SSSMTSEAYKEAVLQAKEHILAGDIFQIVLSQRFERRTFADPFEIYRALRIVNPSPYMTY 96
S + + E Y V + +E I G+IFQ+V S+RF P Y+ L+ NPSPYM +
Sbjct: 234 SCNQSDEEYGAVVSELQEAIRQGEIFQVVPSRRFSLP-CPAPLGPYQTLKDNNPSPYMFF 292
Query: 97 LQARGCILVASSPEILTRVKK--RKITNRPLAGTVRRGKTPKEDLVFE------KELLND 148
+Q L +SPE + R+I P+AGT RG+ L + E+ D
Sbjct: 293 MQDDDFTLFGASPESALKYDAGNRQIEIYPIAGTRPRGRRADGSLDLDLDSRIELEMRTD 352
Query: 149 EKQCAEHIMLVDLGRNDVGKVSKSGSVKVEKLMNIEHYSHVMHISSTVTGELLDHLTSWD 208
K+ AEH+MLVDL RND+ ++ ++GS V L ++ YS VMH+ S V G L L
Sbjct: 353 HKELAEHLMLVDLARNDLARICQAGSRYVADLTKVDRYSFVMHLVSRVVGTLRADLDVLH 412
Query: 209 ALRAALPVGTVSGAPKVKAMELIDELEVTRRGPYSGGFGGISFTGDMDIALALRTIVFPT 268
A +A + +GT+SGAPKV+AM+LI L TRRG Y G G + ++D + +R+
Sbjct: 413 AYQACMNMGTLSGAPKVRAMQLIAALRSTRRGSYGGRVGYFTAVRNLDTCIVIRSAYV-- 470
Query: 269 ATRYDTMYSYKDVDKRREWIAHLQAGAGIVADSDPNDEQKECENKAAGIARAIDLAESS 327
+ +QAGAG+V DS P E E NKA + RAI A +
Sbjct: 471 ----------------EDGHRTVQAGAGVVQDSIPEREADETRNKARAVLRAIATAHHA 513
>d2g5fa1 d.161.1.1 (A:15-449) Salicylate synthase MbtI
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 435
Score = 173 bits (439), Expect = 3e-51
Identities = 80/286 (27%), Positives = 118/286 (41%), Gaps = 19/286 (6%)
Query: 37 SSSMTSEAYKEAVLQAKEHILAGDIFQIVLSQRFERRTFADPFEIYRALRIVNPSPYMTY 96
S ++ V A + I AG +++LS+ E D YR R N
Sbjct: 165 DVSDDPSGFRRRVAVAVDEIAAGRYHKVILSRCVEVPFAIDFPLTYRLGRRHNTPVRSFL 224
Query: 97 LQARGCILVASSPEILTRV-KKRKITNRPLAGTVRRGKTPKEDLVFEKELLNDEKQCAEH 155
LQ G + SPE++T V + PLAGT G+ P D + +L ++ K+ EH
Sbjct: 225 LQLGGIRALGYSPELVTAVRADGVVITEPLAGTRALGRGPAIDRLARDDLESNSKEIVEH 284
Query: 156 IMLVDLGRNDVGKVSKSGSVKVEKLMNIEHYSHVMHISSTVTGELLDHLTSWDALRAALP 215
+ V ++ +++ GS V M + V H+ ST+ L AL A P
Sbjct: 285 AISVRSSLEEITDIAEPGSAAVIDFMTVRERGSVQHLGSTIRARLDPSSDRMAALEALFP 344
Query: 216 VGTVSGAPKVKAMELIDELEVTRRGPYSGGFGGISFTGDMDIALALRTIVFPTATRYDTM 275
T SG PK +E I L+ RG YSG +S G +D AL LR
Sbjct: 345 AVTASGIPKAAGVEAIFRLDECPRGLYSGAVVMLSADGGLDAALTLRAAY---------- 394
Query: 276 YSYKDVDKRREWIAHLQAGAGIVADSDPNDEQKECENKAAGIARAI 321
R L+AGAGI+ +S+P E +E K + + +
Sbjct: 395 -----QVGGR---TWLRAGAGIIEESEPEREFEETCEKLSTLTPYL 432
>d1jfba_ a.104.1.1 (A:) Cytochrome P450-NOR, nitric reductase
{Fungus (Fusarium oxysporum) [TaxId: 5507]}
Length = 399
Score = 30.5 bits (67), Expect = 0.26
Identities = 13/79 (16%), Positives = 25/79 (31%), Gaps = 1/79 (1%)
Query: 70 FERRTFADPFEIYRALRIVNPSPYMTYLQARGCILVASSPEILTRVKKRKI-TNRPLAGT 128
F R + +P + LR NP + LV ++ K+ R G
Sbjct: 6 FSRASGPEPPAEFAKLRATNPVSQVKLFDGSLAWLVTKHKDVCFVATSEKLSKVRTRQGF 65
Query: 129 VRRGKTPKEDLVFEKELLN 147
+ K+ + ++
Sbjct: 66 PELSASGKQAAKAKPTFVD 84
>d1ueda_ a.104.1.1 (A:) p450 monoxygenase OxyC {Amycolatopsis
orientalis [TaxId: 31958]}
Length = 403
Score = 29.0 bits (63), Expect = 0.95
Identities = 8/17 (47%), Positives = 9/17 (52%)
Query: 70 FERRTFADPFEIYRALR 86
F+ RT DP E LR
Sbjct: 15 FQLRTNCDPHEDNFGLR 31
>d1qmha2 d.68.2.1 (A:5-184,A:280-338) RNA 3'-terminal phosphate
cyclase, RPTC {Escherichia coli [TaxId: 562]}
Length = 239
Score = 26.7 bits (59), Expect = 4.2
Identities = 9/47 (19%), Positives = 17/47 (36%), Gaps = 7/47 (14%)
Query: 206 SWDALRAALPVGTVSGAPKVKAMELIDELEVTRRGPYSGGFGGISFT 252
D +R L P + + + + + R G Y G G ++
Sbjct: 128 PADFIRRVL-------EPLLAKIGIHQQTTLLRHGFYPAGGGVVATE 167
>d5nula_ c.23.5.1 (A:) Flavodoxin {Clostridium beijerinckii [TaxId:
1520]}
Length = 138
Score = 25.1 bits (54), Expect = 8.5
Identities = 6/40 (15%), Positives = 19/40 (47%)
Query: 279 KDVDKRREWIAHLQAGAGIVADSDPNDEQKECENKAAGIA 318
+D ++R + ++ ++P++ +++C IA
Sbjct: 97 RDFEERMNGYGCVVVETPLIVQNEPDEAEQDCIEFGKKIA 136
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.318 0.134 0.384
Gapped
Lambda K H
0.267 0.0520 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,244,300
Number of extensions: 59351
Number of successful extensions: 194
Number of sequences better than 10.0: 1
Number of HSP's gapped: 183
Number of HSP's successfully gapped: 15
Length of query: 331
Length of database: 2,407,596
Length adjustment: 86
Effective length of query: 245
Effective length of database: 1,226,816
Effective search space: 300569920
Effective search space used: 300569920
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (24.7 bits)