BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020078
(331 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 147/297 (49%), Gaps = 21/297 (7%)
Query: 41 IRSFSAGELKIATNNYNGHQVIASEHY-KLYKGFLENRP-ISVMKFGDNYSENGENFCFN 98
++ FS EL++A++N++ ++ + K+YKG L + ++V + + + GE
Sbjct: 25 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQT 84
Query: 99 NIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLL-WRHRL 157
+ + HRN+L+L G C+ +LV+ ++ G++A C P +P L W R
Sbjct: 85 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVAS--CLRERPESQPPLDWPKRQ 142
Query: 158 KIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSH 217
+IA+ +AY+H I+ +D+K + IL DE A + DF ++ + + HV
Sbjct: 143 RIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXX- 201
Query: 218 MLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTGRR-----------DNILLEHVK 266
+ T ++APEY+ TG +EKTDVF +G++LLEL+TG+R D +LL+ VK
Sbjct: 202 AVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK 261
Query: 267 KHVENNRLGEIVDPIVVEDKSCPEKEXXXXXXXXXIFECVNESAGDRPTMVYAAKQL 323
++ +L +VD D K+ C S +RP M + L
Sbjct: 262 GLLKEKKLEALVDV----DLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 314
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 117 bits (294), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 146/297 (49%), Gaps = 21/297 (7%)
Query: 41 IRSFSAGELKIATNNYNGHQVIASEHY-KLYKGFL-ENRPISVMKFGDNYSENGENFCFN 98
++ FS EL++A++N+ ++ + K+YKG L + ++V + + ++ GE
Sbjct: 17 LKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQT 76
Query: 99 NIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLL-WRHRL 157
+ + HRN+L+L G C+ +LV+ ++ G++A C P +P L W R
Sbjct: 77 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVAS--CLRERPESQPPLDWPKRQ 134
Query: 158 KIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSH 217
+IA+ +AY+H I+ +D+K + IL DE A + DF ++ + + HV
Sbjct: 135 RIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA 194
Query: 218 MLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTGRR-----------DNILLEHVK 266
+ ++APEY+ TG +EKTDVF +G++LLEL+TG+R D +LL+ VK
Sbjct: 195 VRGXIG-HIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK 253
Query: 267 KHVENNRLGEIVDPIVVEDKSCPEKEXXXXXXXXXIFECVNESAGDRPTMVYAAKQL 323
++ +L +VD D K+ C S +RP M + L
Sbjct: 254 GLLKEKKLEALVDV----DLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 306
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 104 bits (260), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 135/284 (47%), Gaps = 28/284 (9%)
Query: 48 ELKIATNNYN-----GHQVIASEHYKLYKGFLENRPISVMKFGDNYSENGENFCFNNIVF 102
+L+ ATNN++ GH V K+YKG L + +K S G I
Sbjct: 33 DLEEATNNFDHKFLIGHGVFG----KVYKGVLRDGAKVALKRRTPESSQGIEEFETEIET 88
Query: 103 AAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAME 162
+ H +++ LIG C E IL+++++E G L + P + + W RL+I +
Sbjct: 89 LSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMS-MSWEQRLEICIG 147
Query: 163 IGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPE-GETHVTSHMLTR 221
+ Y+H R I+ +D+K IL DE V K++DF S+ E G+TH+ ++
Sbjct: 148 AARGLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXX-VVKG 203
Query: 222 TKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTGRRDNI---------LLEHVKKHVENN 272
T Y+ PEY + G EK+DV+ FG++L E+L R + L E + N
Sbjct: 204 TLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNG 263
Query: 273 RLGEIVDPIVVEDKSCPEKEXXXXXXXXXIFECVNESAGDRPTM 316
+L +IVDP + DK PE +C+ S+ DRP+M
Sbjct: 264 QLEQIVDPNLA-DKIRPES---LRKFGDTAVKCLALSSEDRPSM 303
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 134/284 (47%), Gaps = 28/284 (9%)
Query: 48 ELKIATNNYN-----GHQVIASEHYKLYKGFLENRPISVMKFGDNYSENGENFCFNNIVF 102
+L+ ATNN++ GH V K+YKG L + +K S G I
Sbjct: 33 DLEEATNNFDHKFLIGHGVFG----KVYKGVLRDGAKVALKRRTPESSQGIEEFETEIET 88
Query: 103 AAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAME 162
+ H +++ LIG C E IL+++++E G L + P + + W RL+I +
Sbjct: 89 LSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMS-MSWEQRLEICIG 147
Query: 163 IGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPE-GETHVTSHMLTR 221
+ Y+H R I+ +D+K IL DE V K++DF S+ E +TH+ ++
Sbjct: 148 AARGLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXX-VVKG 203
Query: 222 TKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTGRRDNI---------LLEHVKKHVENN 272
T Y+ PEY + G EK+DV+ FG++L E+L R + L E + N
Sbjct: 204 TLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNG 263
Query: 273 RLGEIVDPIVVEDKSCPEKEXXXXXXXXXIFECVNESAGDRPTM 316
+L +IVDP + DK PE +C+ S+ DRP+M
Sbjct: 264 QLEQIVDPNLA-DKIRPES---LRKFGDTAVKCLALSSEDRPSM 303
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 111/223 (49%), Gaps = 16/223 (7%)
Query: 43 SFSAGELKIATNNYN-------GHQVIASEHYKLYKGFLENRPISVMKFG---DNYSENG 92
SFS ELK TNN++ G+++ +YKG++ N ++V K D +E
Sbjct: 14 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEEL 73
Query: 93 ENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLL 152
+ I A+ H N+++L+G + + LV+ ++ G+L DR+ G PL
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT--PPLS 131
Query: 153 WRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGET 212
W R KIA N + ++H + +DIK + IL DE AK+SDF + +
Sbjct: 132 WHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 188
Query: 213 HVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
V + T Y+APE L G K+D++ FG++LLE++TG
Sbjct: 189 TVMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITG 230
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 111/223 (49%), Gaps = 16/223 (7%)
Query: 43 SFSAGELKIATNNYN-------GHQVIASEHYKLYKGFLENRPISVMKFG---DNYSENG 92
SFS ELK TNN++ G+++ +YKG++ N ++V K D +E
Sbjct: 8 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEEL 67
Query: 93 ENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLL 152
+ I A+ H N+++L+G + + LV+ ++ G+L DR+ G PL
Sbjct: 68 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT--PPLS 125
Query: 153 WRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGET 212
W R KIA N + ++H + +DIK + IL DE AK+SDF + +
Sbjct: 126 WHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 182
Query: 213 HVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
V + T Y+APE L G K+D++ FG++LLE++TG
Sbjct: 183 XVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITG 224
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 111/223 (49%), Gaps = 16/223 (7%)
Query: 43 SFSAGELKIATNNYN-------GHQVIASEHYKLYKGFLENRPISVMKFG---DNYSENG 92
SFS ELK TNN++ G+++ +YKG++ N ++V K D +E
Sbjct: 14 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEEL 73
Query: 93 ENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLL 152
+ I A+ H N+++L+G + + LV+ ++ G+L DR+ G PL
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT--PPLS 131
Query: 153 WRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGET 212
W R KIA N + ++H + +DIK + IL DE AK+SDF + +
Sbjct: 132 WHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 188
Query: 213 HVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
V + T Y+APE L G K+D++ FG++LLE++TG
Sbjct: 189 TVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITG 230
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 108/223 (48%), Gaps = 16/223 (7%)
Query: 43 SFSAGELKIATNNYN-------GHQVIASEHYKLYKGFLENRPISVMKFG---DNYSENG 92
SFS ELK TNN++ G++ +YKG++ N ++V K D +E
Sbjct: 5 SFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEEL 64
Query: 93 ENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLL 152
+ I A+ H N+++L+G + + LV+ + G+L DR+ G PL
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGT--PPLS 122
Query: 153 WRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGET 212
W R KIA N + ++H + +DIK + IL DE AK+SDF + +
Sbjct: 123 WHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 179
Query: 213 HVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
V + T Y APE L G K+D++ FG++LLE++TG
Sbjct: 180 XVXXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITG 221
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 77/155 (49%), Gaps = 5/155 (3%)
Query: 100 IVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKI 159
+ ++ H NI+ +G + +V E++ G+L R+ G E L R RL +
Sbjct: 85 VAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLY-RLLHKSGAR-EQLDERRRLSM 142
Query: 160 AMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHML 219
A ++ M Y+H PIV +++K +L D+ K+ DF S + T ++S
Sbjct: 143 AYDVAKGMNYLH-NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL--KASTFLSSKSA 199
Query: 220 TRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
T ++APE + NEK+DV+ FG++L EL T
Sbjct: 200 AGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELAT 234
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 83/176 (47%), Gaps = 6/176 (3%)
Query: 79 ISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLAD 138
+ ++ D ++E F + ++ H NI+ +G + +V E++ G+L
Sbjct: 65 VKILMEQDFHAERVNEF-LREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLY- 122
Query: 139 RICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKL 198
R+ G E L R RL +A ++ M Y+H PIV +D+K +L D+ K+
Sbjct: 123 RLLHKSGAR-EQLDERRRLSMAYDVAKGMNYLH-NRNPPIVHRDLKSPNLLVDKKYTVKV 180
Query: 199 SDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
DF S + + S T ++APE + NEK+DV+ FG++L EL T
Sbjct: 181 CDFGLSRL--KASXFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELAT 234
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 88/176 (50%), Gaps = 16/176 (9%)
Query: 103 AAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAME 162
++Q++H+NI+ +I E + LV E++E TL++ I S HGP L + +
Sbjct: 65 SSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIES-HGP----LSVDTAINFTNQ 119
Query: 163 IGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRT 222
I + + + H IV +DIK IL D K+ DF ++ + E T+H+L T
Sbjct: 120 ILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLG-T 175
Query: 223 KRYLAPEYILTGLCNEKTDVFCFGMLLLELLTGRRD-------NILLEHVKKHVEN 271
+Y +PE +E TD++ G++L E+L G +I ++H++ V N
Sbjct: 176 VQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPN 231
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 97/201 (48%), Gaps = 25/201 (12%)
Query: 68 KLYKGFLENRPISVMKF----GDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEI 123
K+Y+ F ++V ++ S+ EN +FA + H NI+ L G C++
Sbjct: 22 KVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFA-MLKHPNIIALRGVCLKEPN 80
Query: 124 PILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDI 183
LV EF G L +R+ S G + P + + A++I M Y+H PI+ +D+
Sbjct: 81 LCLVMEFARGGPL-NRVLS--GKRIPPDI---LVNWAVQIARGMNYLHDEAIVPIIHRDL 134
Query: 184 KLSQILF-------DEYN-VAKLSDFSESEYIPEGETHVTSHM-LTRTKRYLAPEYILTG 234
K S IL D N + K++DF + E H T+ M ++APE I
Sbjct: 135 KSSNILILQKVENGDLSNKILKITDFGLAR-----EWHRTTKMSAAGAYAWMAPEVIRAS 189
Query: 235 LCNEKTDVFCFGMLLLELLTG 255
+ ++ +DV+ +G+LL ELLTG
Sbjct: 190 MFSKGSDVWSYGVLLWELLTG 210
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 101/231 (43%), Gaps = 26/231 (11%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIG 164
+++H +++L G C+E LVFEF+E+G L+D + + G L L + +++
Sbjct: 58 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL----LGMCLDVC 113
Query: 165 NAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKR 224
MAY+ ++ +D+ L E V K+SDF + ++ + + + +S +
Sbjct: 114 EGMAYLE---EASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVK 169
Query: 225 YLAPEYILTGLCNEKTDVFCFGMLLLELLTGRRDNILLEHVKKHVENNRLGEIVDPIVVE 284
+ +PE + K+DV+ FG+L+ E+ + K EN E VVE
Sbjct: 170 WASPEVFSFSRYSSKSDVWSFGVLMWEVFS---------EGKIPYENRSNSE-----VVE 215
Query: 285 DKSCPEKEXXXXXXXXXIFE----CVNESAGDRPTMVYAAKQLRQMYLSAV 331
D S + +++ C E DRP +QL + S +
Sbjct: 216 DISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAAIAASGL 266
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 86/159 (54%), Gaps = 18/159 (11%)
Query: 104 AQMNHRNILKLIGCCIETEIPI-LVFEFVEYGTLADRICSPHGPHLEPLLW---RHRLKI 159
+++NH NI+KL G C+ P+ LV E+ E G+L + + HG EPL + H +
Sbjct: 57 SRVNHPNIVKLYGACLN---PVCLVMEYAEGGSLYNVL---HG--AEPLPYYTAAHAMSW 108
Query: 160 AMEIGNAMAYIHIGFRRPIVFKDIKLSQILF-DEYNVAKLSDFSESEYIPEGETHVTSHM 218
++ +AY+H + ++ +D+K +L V K+ DF + I +TH+T++
Sbjct: 109 CLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI---QTHMTNN- 164
Query: 219 LTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTGRR 257
+ ++APE +EK DVF +G++L E++T R+
Sbjct: 165 -KGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRK 202
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 86/159 (54%), Gaps = 18/159 (11%)
Query: 104 AQMNHRNILKLIGCCIETEIPI-LVFEFVEYGTLADRICSPHGPHLEPLLW---RHRLKI 159
+++NH NI+KL G C+ P+ LV E+ E G+L + + HG EPL + H +
Sbjct: 56 SRVNHPNIVKLYGACLN---PVCLVMEYAEGGSLYNVL---HG--AEPLPYYTAAHAMSW 107
Query: 160 AMEIGNAMAYIHIGFRRPIVFKDIKLSQILF-DEYNVAKLSDFSESEYIPEGETHVTSHM 218
++ +AY+H + ++ +D+K +L V K+ DF + I +TH+T++
Sbjct: 108 CLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI---QTHMTNN- 163
Query: 219 LTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTGRR 257
+ ++APE +EK DVF +G++L E++T R+
Sbjct: 164 -KGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRK 201
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 102/231 (44%), Gaps = 26/231 (11%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIG 164
+++H +++L G C+E LVFEF+E+G L+D + + G L L + +++
Sbjct: 61 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL----LGMCLDVC 116
Query: 165 NAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKR 224
MAY+ ++ +D+ L E V K+SDF + ++ + + + +S +
Sbjct: 117 EGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVK 172
Query: 225 YLAPEYILTGLCNEKTDVFCFGMLLLELLTGRRDNILLEHVKKHVENNRLGEIVDPIVVE 284
+ +PE + K+DV+ FG+L+ E+ + K EN E VVE
Sbjct: 173 WASPEVFSFSRYSSKSDVWSFGVLMWEVFS---------EGKIPYENRSNSE-----VVE 218
Query: 285 DKSCPEKEXXXXXXXXXIFE----CVNESAGDRPTMVYAAKQLRQMYLSAV 331
D S + +++ C E DRP +QL ++ S +
Sbjct: 219 DISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAESGL 269
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 102/231 (44%), Gaps = 26/231 (11%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIG 164
+++H +++L G C+E LVFEF+E+G L+D + + G L L + +++
Sbjct: 58 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL----LGMCLDVC 113
Query: 165 NAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKR 224
MAY+ ++ +D+ L E V K+SDF + ++ + + + +S +
Sbjct: 114 EGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVK 169
Query: 225 YLAPEYILTGLCNEKTDVFCFGMLLLELLTGRRDNILLEHVKKHVENNRLGEIVDPIVVE 284
+ +PE + K+DV+ FG+L+ E+ + K EN E VVE
Sbjct: 170 WASPEVFSFSRYSSKSDVWSFGVLMWEVFS---------EGKIPYENRSNSE-----VVE 215
Query: 285 DKSCPEKEXXXXXXXXXIFE----CVNESAGDRPTMVYAAKQLRQMYLSAV 331
D S + +++ C E DRP +QL ++ S +
Sbjct: 216 DISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAESGL 266
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 102/231 (44%), Gaps = 26/231 (11%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIG 164
+++H +++L G C+E LVFEF+E+G L+D + + G L L + +++
Sbjct: 56 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL----LGMCLDVC 111
Query: 165 NAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKR 224
MAY+ ++ +D+ L E V K+SDF + ++ + + + +S +
Sbjct: 112 EGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVK 167
Query: 225 YLAPEYILTGLCNEKTDVFCFGMLLLELLTGRRDNILLEHVKKHVENNRLGEIVDPIVVE 284
+ +PE + K+DV+ FG+L+ E+ + K EN E VVE
Sbjct: 168 WASPEVFSFSRYSSKSDVWSFGVLMWEVFS---------EGKIPYENRSNSE-----VVE 213
Query: 285 DKSCPEKEXXXXXXXXXIFE----CVNESAGDRPTMVYAAKQLRQMYLSAV 331
D S + +++ C E DRP +QL ++ S +
Sbjct: 214 DISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAESGL 264
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 102/231 (44%), Gaps = 26/231 (11%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIG 164
+++H +++L G C+E LVFEF+E+G L+D + + G L L + +++
Sbjct: 78 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL----LGMCLDVC 133
Query: 165 NAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKR 224
MAY+ ++ +D+ L E V K+SDF + ++ + + + +S +
Sbjct: 134 EGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVK 189
Query: 225 YLAPEYILTGLCNEKTDVFCFGMLLLELLTGRRDNILLEHVKKHVENNRLGEIVDPIVVE 284
+ +PE + K+DV+ FG+L+ E+ + K EN E VVE
Sbjct: 190 WASPEVFSFSRYSSKSDVWSFGVLMWEVFS---------EGKIPYENRSNSE-----VVE 235
Query: 285 DKSCPEKEXXXXXXXXXIFE----CVNESAGDRPTMVYAAKQLRQMYLSAV 331
D S + +++ C E DRP +QL ++ S +
Sbjct: 236 DISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAESGL 286
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 76/170 (44%), Gaps = 22/170 (12%)
Query: 104 AQMNHRNILKLIGCCIETEIPILVFEFVEYGTLAD--RICSPH----------------- 144
A+ ++ NI+KL+G C + L+FE++ YG L + R SPH
Sbjct: 105 AEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVS 164
Query: 145 GPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSES 204
P PL +L IA ++ MAY+ R V +D+ L E V K++DF S
Sbjct: 165 SPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLS 221
Query: 205 EYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
I + + R++ PE I ++DV+ +G++L E+ +
Sbjct: 222 RNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 100/227 (44%), Gaps = 20/227 (8%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIG 164
Q+ H+ +++L + I I+ E++E G+L D + +P G L L +A +I
Sbjct: 64 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTI---NKLLDMAAQIA 119
Query: 165 NAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKR 224
MA+I R + +D++ + IL + K++DF + I + E + +
Sbjct: 120 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-YTAREGAKFPIK 175
Query: 225 YLAPEYILTGLCNEKTDVFCFGMLLLELLTGRRDNILLEHVKKHVENNRLG-EIVDPIVV 283
+ APE I G K+DV+ FG+LL E++T R + ++N G +V P
Sbjct: 176 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP--- 232
Query: 284 EDKSCPEKEXXXXXXXXXIFECVNESAGDRPTMVYAAKQLRQMYLSA 330
+CPE+ + C E DRPT Y L + +
Sbjct: 233 --DNCPEE------LYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 271
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 100/227 (44%), Gaps = 20/227 (8%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIG 164
Q+ H+ +++L + I I+ E++E G+L D + +P G L L +A +I
Sbjct: 70 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTI---NKLLDMAAQIA 125
Query: 165 NAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKR 224
MA+I R + +D++ + IL + K++DF + I + E + +
Sbjct: 126 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-YTAREGAKFPIK 181
Query: 225 YLAPEYILTGLCNEKTDVFCFGMLLLELLTGRRDNILLEHVKKHVENNRLG-EIVDPIVV 283
+ APE I G K+DV+ FG+LL E++T R + ++N G +V P
Sbjct: 182 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP--- 238
Query: 284 EDKSCPEKEXXXXXXXXXIFECVNESAGDRPTMVYAAKQLRQMYLSA 330
+CPE+ + C E DRPT Y L + +
Sbjct: 239 --DNCPEE------LYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 277
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 100/227 (44%), Gaps = 20/227 (8%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIG 164
Q+ H+ +++L + I I+ E++E G+L D + +P G L L +A +I
Sbjct: 69 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTI---NKLLDMAAQIA 124
Query: 165 NAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKR 224
MA+I R + +D++ + IL + K++DF + I + E + +
Sbjct: 125 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-YTAREGAKFPIK 180
Query: 225 YLAPEYILTGLCNEKTDVFCFGMLLLELLTGRRDNILLEHVKKHVENNRLG-EIVDPIVV 283
+ APE I G K+DV+ FG+LL E++T R + ++N G +V P
Sbjct: 181 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP--- 237
Query: 284 EDKSCPEKEXXXXXXXXXIFECVNESAGDRPTMVYAAKQLRQMYLSA 330
+CPE+ + C E DRPT Y L + +
Sbjct: 238 --DNCPEE------LYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 276
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 100/226 (44%), Gaps = 20/226 (8%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIG 164
Q+ H+ +++L + I I+ E++E G+L D + +P G L L +A +I
Sbjct: 59 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTI---NKLLDMAAQIA 114
Query: 165 NAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKR 224
MA+I R + +D++ + IL + K++DF + I + E + +
Sbjct: 115 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-YTAREGAKFPIK 170
Query: 225 YLAPEYILTGLCNEKTDVFCFGMLLLELLTGRRDNILLEHVKKHVENNRLG-EIVDPIVV 283
+ APE I G K+DV+ FG+LL E++T R + ++N G +V P
Sbjct: 171 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP--- 227
Query: 284 EDKSCPEKEXXXXXXXXXIFECVNESAGDRPTMVYAAKQLRQMYLS 329
+CPE+ + C E DRPT Y L + +
Sbjct: 228 --DNCPEE------LYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 265
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 99/227 (43%), Gaps = 20/227 (8%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIG 164
Q+ H+ +++L + I I+ E++E G+L D + +P G L L +A +I
Sbjct: 64 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTI---NKLLDMAAQIA 119
Query: 165 NAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKR 224
MA+I R + +D++ + IL + K++DF + I + E K
Sbjct: 120 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK- 175
Query: 225 YLAPEYILTGLCNEKTDVFCFGMLLLELLTGRRDNILLEHVKKHVENNRLG-EIVDPIVV 283
+ APE I G K+DV+ FG+LL E++T R + ++N G +V P
Sbjct: 176 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP--- 232
Query: 284 EDKSCPEKEXXXXXXXXXIFECVNESAGDRPTMVYAAKQLRQMYLSA 330
+CPE+ + C E DRPT Y L + +
Sbjct: 233 --DNCPEE------LYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 271
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 99/234 (42%), Gaps = 27/234 (11%)
Query: 100 IVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKI 159
+ + +NH NI+KL G + P +V EFV G L R+ P+ W +L++
Sbjct: 74 VFIMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLD----KAHPIKWSVKLRL 127
Query: 160 AMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYN-----VAKLSDFSESEYIPEGETHV 214
++I + Y+ PIV +D++ I + AK++DFS S+ H
Sbjct: 128 MLDIALGIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQ----SVHS 182
Query: 215 TSHMLTRTKRYLAPEYILTG--LCNEKTDVFCFGMLLLELLTGRRDNILLEHVKKHVENN 272
S +L + ++APE I EK D + F M+L +LTG + K N
Sbjct: 183 VSGLLGNFQ-WMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINM 241
Query: 273 RLGEIVDPIVVEDKSCPEKEXXXXXXXXXIFECVNESAGDRPTMVYAAKQLRQM 326
E + P + ED CP + I C + RP Y K+L ++
Sbjct: 242 IREEGLRPTIPED--CPPR------LRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 99/227 (43%), Gaps = 20/227 (8%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIG 164
Q+ H+ +++L + I I+ E++E G+L D + +P G L L +A +I
Sbjct: 65 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTI---NKLLDMAAQIA 120
Query: 165 NAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKR 224
MA+I R + +D++ + IL + K++DF + I + E K
Sbjct: 121 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK- 176
Query: 225 YLAPEYILTGLCNEKTDVFCFGMLLLELLTGRRDNILLEHVKKHVENNRLG-EIVDPIVV 283
+ APE I G K+DV+ FG+LL E++T R + ++N G +V P
Sbjct: 177 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP--- 233
Query: 284 EDKSCPEKEXXXXXXXXXIFECVNESAGDRPTMVYAAKQLRQMYLSA 330
+CPE+ + C E DRPT Y L + +
Sbjct: 234 --DNCPEE------LYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 272
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 99/226 (43%), Gaps = 20/226 (8%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIG 164
Q+ H+ +++L + I I+ E++E G+L D + +P G L L +A +I
Sbjct: 64 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTI---NKLLDMAAQIA 119
Query: 165 NAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKR 224
MA+I R + +D++ + IL + K++DF + I + E K
Sbjct: 120 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIK- 175
Query: 225 YLAPEYILTGLCNEKTDVFCFGMLLLELLTGRRDNILLEHVKKHVENNRLG-EIVDPIVV 283
+ APE I G K+DV+ FG+LL E++T R + ++N G +V P
Sbjct: 176 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP--- 232
Query: 284 EDKSCPEKEXXXXXXXXXIFECVNESAGDRPTMVYAAKQLRQMYLS 329
+CPE+ + C E DRPT Y L + +
Sbjct: 233 --DNCPEE------LYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 270
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 99/227 (43%), Gaps = 20/227 (8%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIG 164
Q+ H+ +++L + I I+ E++E G+L D + +P G L L +A +I
Sbjct: 66 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTI---NKLLDMAAQIA 121
Query: 165 NAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKR 224
MA+I R + +D++ + IL + K++DF + I + E K
Sbjct: 122 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK- 177
Query: 225 YLAPEYILTGLCNEKTDVFCFGMLLLELLTGRRDNILLEHVKKHVENNRLG-EIVDPIVV 283
+ APE I G K+DV+ FG+LL E++T R + ++N G +V P
Sbjct: 178 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP--- 234
Query: 284 EDKSCPEKEXXXXXXXXXIFECVNESAGDRPTMVYAAKQLRQMYLSA 330
+CPE+ + C E DRPT Y L + +
Sbjct: 235 --DNCPEE------LYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 273
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 98/226 (43%), Gaps = 18/226 (7%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIG 164
Q+ H+ +++L + I I+ E++E G+L D + +P G L L +A +I
Sbjct: 73 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTI---NKLLDMAAQIA 128
Query: 165 NAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKR 224
MA+I R + +D++ + IL + K++DF + I + E K
Sbjct: 129 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK- 184
Query: 225 YLAPEYILTGLCNEKTDVFCFGMLLLELLTGRRDNILLEHVKKHVENNRLGEIVDPIVVE 284
+ APE I G K+DV+ FG+LL E++T R + ++N G +V
Sbjct: 185 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY----RMVR 240
Query: 285 DKSCPEKEXXXXXXXXXIFECVNESAGDRPTMVYAAKQLRQMYLSA 330
+CPE+ + C E DRPT Y L + +
Sbjct: 241 PDNCPEE------LYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 280
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 99/226 (43%), Gaps = 18/226 (7%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIG 164
Q+ H+ +++L + I I+ E++E G+L D + +P G L L +A +I
Sbjct: 74 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTI---NKLLDMAAQIA 129
Query: 165 NAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKR 224
MA+I R + +D++ + IL + K++DF + I + E + +
Sbjct: 130 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-YTAREGAKFPIK 185
Query: 225 YLAPEYILTGLCNEKTDVFCFGMLLLELLTGRRDNILLEHVKKHVENNRLGEIVDPIVVE 284
+ APE I G K+DV+ FG+LL E++T R + ++N G +V
Sbjct: 186 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY----RMVR 241
Query: 285 DKSCPEKEXXXXXXXXXIFECVNESAGDRPTMVYAAKQLRQMYLSA 330
+CPE+ + C E DRPT Y L + +
Sbjct: 242 PDNCPEE------LYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 281
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 99/227 (43%), Gaps = 20/227 (8%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIG 164
Q+ H+ +++L + I I+ E++E G+L D + +P G L L +A +I
Sbjct: 64 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTI---NKLLDMAAQIA 119
Query: 165 NAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKR 224
MA+I R + +D++ + IL + K++DF + I + E K
Sbjct: 120 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK- 175
Query: 225 YLAPEYILTGLCNEKTDVFCFGMLLLELLTGRRDNILLEHVKKHVENNRLG-EIVDPIVV 283
+ APE I G K+DV+ FG+LL E++T R + ++N G +V P
Sbjct: 176 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP--- 232
Query: 284 EDKSCPEKEXXXXXXXXXIFECVNESAGDRPTMVYAAKQLRQMYLSA 330
+CPE+ + C E DRPT Y L + +
Sbjct: 233 --DNCPEE------LYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 271
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 98/226 (43%), Gaps = 18/226 (7%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIG 164
Q+ H+ +++L + I I+ E++E G+L D + +P G L L +A +I
Sbjct: 70 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTI---NKLLDMAAQIA 125
Query: 165 NAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKR 224
MA+I R + +D++ + IL + K++DF + I + E K
Sbjct: 126 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK- 181
Query: 225 YLAPEYILTGLCNEKTDVFCFGMLLLELLTGRRDNILLEHVKKHVENNRLGEIVDPIVVE 284
+ APE I G K+DV+ FG+LL E++T R + ++N G +V
Sbjct: 182 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY----RMVR 237
Query: 285 DKSCPEKEXXXXXXXXXIFECVNESAGDRPTMVYAAKQLRQMYLSA 330
+CPE+ + C E DRPT Y L + +
Sbjct: 238 PDNCPEE------LYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 277
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 98/226 (43%), Gaps = 18/226 (7%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIG 164
Q+ H+ +++L + I I+ E++E G+L D + +P G L L +A +I
Sbjct: 72 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTI---NKLLDMAAQIA 127
Query: 165 NAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKR 224
MA+I R + +D++ + IL + K++DF + I + E K
Sbjct: 128 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK- 183
Query: 225 YLAPEYILTGLCNEKTDVFCFGMLLLELLTGRRDNILLEHVKKHVENNRLGEIVDPIVVE 284
+ APE I G K+DV+ FG+LL E++T R + ++N G +V
Sbjct: 184 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY----RMVR 239
Query: 285 DKSCPEKEXXXXXXXXXIFECVNESAGDRPTMVYAAKQLRQMYLSA 330
+CPE+ + C E DRPT Y L + +
Sbjct: 240 PDNCPEE------LYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 279
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 98/234 (41%), Gaps = 27/234 (11%)
Query: 100 IVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKI 159
+ + +NH NI+KL G + P +V EFV G L R+ P+ W +L++
Sbjct: 74 VFIMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLD----KAHPIKWSVKLRL 127
Query: 160 AMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYN-----VAKLSDFSESEYIPEGETHV 214
++I + Y+ PIV +D++ I + AK++DF S+ H
Sbjct: 128 MLDIALGIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQ----SVHS 182
Query: 215 TSHMLTRTKRYLAPEYILTG--LCNEKTDVFCFGMLLLELLTGRRDNILLEHVKKHVENN 272
S +L + ++APE I EK D + F M+L +LTG + K N
Sbjct: 183 VSGLLGNFQ-WMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINM 241
Query: 273 RLGEIVDPIVVEDKSCPEKEXXXXXXXXXIFECVNESAGDRPTMVYAAKQLRQM 326
E + P + ED CP + I C + RP Y K+L ++
Sbjct: 242 IREEGLRPTIPED--CPPR------LRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 130/298 (43%), Gaps = 30/298 (10%)
Query: 36 GKRNPIRSFSAGELKIATNNYNGHQVIASEHYKLYKGFLENRPISV-MKFGDNYSENGEN 94
G +P ++ E++ T+ H++ ++ ++Y+G + ++V +K + E
Sbjct: 1 GAMDPSPNYDKWEME-RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE 59
Query: 95 FCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLAD--RICSPHGPHLEPLL 152
F V ++ H N+++L+G C ++ EF+ YG L D R C+ + LL
Sbjct: 60 FLKEAAVMK-EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL 118
Query: 153 WRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGET 212
+ +A +I +AM Y+ ++ + +D+ L E ++ K++DF S + G+T
Sbjct: 119 Y-----MATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDT 169
Query: 213 HVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT---GRRDNILLEHVKKHV 269
+ ++ APE + + K+DV+ FG+LL E+ T I L V + +
Sbjct: 170 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 229
Query: 270 ENNRLGEIVDPIVVEDKSCPEKEXXXXXXXXXIFECVNESAGDRPTMVYAAKQLRQMY 327
E + E + CPEK + C + DRP+ + M+
Sbjct: 230 EKDYRME-------RPEGCPEK------VYELMRACWQWNPSDRPSFAEIHQAFETMF 274
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 72/160 (45%), Gaps = 15/160 (9%)
Query: 106 MNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLE-----------PLLWR 154
+ H++I++ G C E ++VFE++ +G L +R HGP + PL
Sbjct: 100 LQHQHIVRFFGVCTEGRPLLMVFEYMRHGDL-NRFLRSHGPDAKLLAGGEDVAPGPLGLG 158
Query: 155 HRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHV 214
L +A ++ M Y+ G V +D+ L + V K+ DF S I + +
Sbjct: 159 QLLAVASQVAAGMVYL-AGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYR 215
Query: 215 TSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
R++ PE IL ++DV+ FG++L E+ T
Sbjct: 216 VGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 255
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 120/275 (43%), Gaps = 29/275 (10%)
Query: 59 HQVIASEHYKLYKGFLENRPISV-MKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGC 117
H++ ++ ++Y+G + ++V +K + E F V ++ H N+++L+G
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK-EIKHPNLVQLLGV 82
Query: 118 CIETEIPILVFEFVEYGTLAD--RICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFR 175
C ++ EF+ YG L D R C+ + LL+ +A +I +AM Y+ +
Sbjct: 83 CTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLY-----MATQISSAMEYLE---K 134
Query: 176 RPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGL 235
+ + +D+ L E ++ K++DF S + G+T+ ++ APE +
Sbjct: 135 KNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNK 193
Query: 236 CNEKTDVFCFGMLLLELLT---GRRDNILLEHVKKHVENNRLGEIVDPIVVEDKSCPEKE 292
+ K+DV+ FG+LL E+ T I L V + +E + E + CPEK
Sbjct: 194 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME-------RPEGCPEK- 245
Query: 293 XXXXXXXXXIFECVNESAGDRPTMVYAAKQLRQMY 327
+ C + DRP+ + M+
Sbjct: 246 -----VYELMRACWQWNPSDRPSFAEIHQAFETMF 275
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 72/160 (45%), Gaps = 15/160 (9%)
Query: 106 MNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLE-----------PLLWR 154
+ H++I++ G C E ++VFE++ +G L +R HGP + PL
Sbjct: 71 LQHQHIVRFFGVCTEGRPLLMVFEYMRHGDL-NRFLRSHGPDAKLLAGGEDVAPGPLGLG 129
Query: 155 HRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHV 214
L +A ++ M Y+ G V +D+ L + V K+ DF S I + +
Sbjct: 130 QLLAVASQVAAGMVYL-AGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYR 186
Query: 215 TSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
R++ PE IL ++DV+ FG++L E+ T
Sbjct: 187 VGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 226
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 76/156 (48%), Gaps = 25/156 (16%)
Query: 106 MNHRNILKLIGCCIETEIPILVFEFVEYGTL------ADRICSPHGPHLEPLLWRHRLKI 159
+ H I+++ G + + ++ +++E G L + R +P
Sbjct: 63 VTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFY----------- 111
Query: 160 AMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHML 219
A E+ A+ Y+H + I+++D+K IL D+ K++DF ++Y+P+ ++ L
Sbjct: 112 AAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD-----VTYXL 163
Query: 220 TRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
T Y+APE + T N+ D + FG+L+ E+L G
Sbjct: 164 CGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAG 199
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 72/160 (45%), Gaps = 15/160 (9%)
Query: 106 MNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLE-----------PLLWR 154
+ H++I++ G C E ++VFE++ +G L +R HGP + PL
Sbjct: 77 LQHQHIVRFFGVCTEGRPLLMVFEYMRHGDL-NRFLRSHGPDAKLLAGGEDVAPGPLGLG 135
Query: 155 HRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHV 214
L +A ++ M Y+ G V +D+ L + V K+ DF S I + +
Sbjct: 136 QLLAVASQVAAGMVYL-AGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYR 192
Query: 215 TSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
R++ PE IL ++DV+ FG++L E+ T
Sbjct: 193 VGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 232
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 119/275 (43%), Gaps = 29/275 (10%)
Query: 59 HQVIASEHYKLYKGFLENRPISV-MKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGC 117
H++ ++ ++Y+G + ++V +K + E F V ++ H N+++L+G
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK-EIKHPNLVQLLGV 77
Query: 118 CIETEIPILVFEFVEYGTLAD--RICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFR 175
C ++ EF+ YG L D R C+ LL+ +A +I +AM Y+ +
Sbjct: 78 CTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLY-----MATQISSAMEYLE---K 129
Query: 176 RPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGL 235
+ + +D+ L E ++ K++DF S + G+T+ ++ APE +
Sbjct: 130 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 236 CNEKTDVFCFGMLLLELLT---GRRDNILLEHVKKHVENNRLGEIVDPIVVEDKSCPEKE 292
+ K+DV+ FG+LL E+ T I L V + +E + E + CPEK
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME-------RPEGCPEK- 240
Query: 293 XXXXXXXXXIFECVNESAGDRPTMVYAAKQLRQMY 327
+ C + DRP+ + M+
Sbjct: 241 -----VYELMRACWQWNPSDRPSFAEIHQAFETMF 270
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 98/234 (41%), Gaps = 27/234 (11%)
Query: 100 IVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKI 159
+ + +NH NI+KL G + P +V EFV G L R+ P+ W +L++
Sbjct: 74 VFIMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLD----KAHPIKWSVKLRL 127
Query: 160 AMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYN-----VAKLSDFSESEYIPEGETHV 214
++I + Y+ PIV +D++ I + AK++DF S+ H
Sbjct: 128 MLDIALGIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQ----SVHS 182
Query: 215 TSHMLTRTKRYLAPEYILTG--LCNEKTDVFCFGMLLLELLTGRRDNILLEHVKKHVENN 272
S +L + ++APE I EK D + F M+L +LTG + K N
Sbjct: 183 VSGLLGNFQ-WMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINM 241
Query: 273 RLGEIVDPIVVEDKSCPEKEXXXXXXXXXIFECVNESAGDRPTMVYAAKQLRQM 326
E + P + ED CP + I C + RP Y K+L ++
Sbjct: 242 IREEGLRPTIPED--CPPR------LRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 119/275 (43%), Gaps = 29/275 (10%)
Query: 59 HQVIASEHYKLYKGFLENRPISV-MKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGC 117
H++ ++ ++Y+G + ++V +K + E F V ++ H N+++L+G
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK-EIKHPNLVQLLGV 77
Query: 118 CIETEIPILVFEFVEYGTLAD--RICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFR 175
C ++ EF+ YG L D R C+ LL+ +A +I +AM Y+ +
Sbjct: 78 CTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLY-----MATQISSAMEYLE---K 129
Query: 176 RPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGL 235
+ + +D+ L E ++ K++DF S + G+T+ ++ APE +
Sbjct: 130 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 236 CNEKTDVFCFGMLLLELLT---GRRDNILLEHVKKHVENNRLGEIVDPIVVEDKSCPEKE 292
+ K+DV+ FG+LL E+ T I L V + +E + E + CPEK
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME-------RPEGCPEK- 240
Query: 293 XXXXXXXXXIFECVNESAGDRPTMVYAAKQLRQMY 327
+ C + DRP+ + M+
Sbjct: 241 -----VYELMRACWQWNPSDRPSFAEIHQAFETMF 270
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 101/231 (43%), Gaps = 26/231 (11%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIG 164
+++H +++L G C+E LV EF+E+G L+D + + G L L + +++
Sbjct: 59 KLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETL----LGMCLDVC 114
Query: 165 NAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKR 224
MAY+ ++ +D+ L E V K+SDF + ++ + + + +S +
Sbjct: 115 EGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVK 170
Query: 225 YLAPEYILTGLCNEKTDVFCFGMLLLELLTGRRDNILLEHVKKHVENNRLGEIVDPIVVE 284
+ +PE + K+DV+ FG+L+ E+ + K EN E VVE
Sbjct: 171 WASPEVFSFSRYSSKSDVWSFGVLMWEVFS---------EGKIPYENRSNSE-----VVE 216
Query: 285 DKSCPEKEXXXXXXXXXIFE----CVNESAGDRPTMVYAAKQLRQMYLSAV 331
D S + +++ C E DRP +QL ++ S +
Sbjct: 217 DISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAESGL 267
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 120/275 (43%), Gaps = 29/275 (10%)
Query: 59 HQVIASEHYKLYKGFLENRPISV-MKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGC 117
H++ ++ ++Y+G + ++V +K + E F V ++ H N+++L+G
Sbjct: 20 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK-EIKHPNLVQLLGV 78
Query: 118 CIETEIPILVFEFVEYGTLAD--RICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFR 175
C ++ EF+ YG L D R C+ + LL+ +A +I +AM Y+ +
Sbjct: 79 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY-----MATQISSAMEYLE---K 130
Query: 176 RPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGL 235
+ + +D+ L E ++ K++DF S + G+T+ ++ APE +
Sbjct: 131 KNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAPAGAKFPIKWTAPESLAYNK 189
Query: 236 CNEKTDVFCFGMLLLELLT---GRRDNILLEHVKKHVENNRLGEIVDPIVVEDKSCPEKE 292
+ K+DV+ FG+LL E+ T I L V + +E + E + CPEK
Sbjct: 190 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME-------RPEGCPEK- 241
Query: 293 XXXXXXXXXIFECVNESAGDRPTMVYAAKQLRQMY 327
+ C + DRP+ + M+
Sbjct: 242 -----VYELMRACWQWNPSDRPSFAEIHQAFETMF 271
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 100/227 (44%), Gaps = 20/227 (8%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIG 164
Q+ H+ +++L + I I+ E++E G+L D + +P G L L +A +I
Sbjct: 60 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTI---NKLLDMAAQIA 115
Query: 165 NAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKR 224
MA+I R + ++++ + IL + K++DF + I + E + +
Sbjct: 116 EGMAFIE---ERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNE-YTAREGAKFPIK 171
Query: 225 YLAPEYILTGLCNEKTDVFCFGMLLLELLTGRRDNILLEHVKKHVENNRLG-EIVDPIVV 283
+ APE I G K+DV+ FG+LL E++T R + ++N G +V P
Sbjct: 172 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP--- 228
Query: 284 EDKSCPEKEXXXXXXXXXIFECVNESAGDRPTMVYAAKQLRQMYLSA 330
+CPE+ + C E DRPT Y L + +
Sbjct: 229 --DNCPEE------LYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 267
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 120/275 (43%), Gaps = 29/275 (10%)
Query: 59 HQVIASEHYKLYKGFLENRPISV-MKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGC 117
H++ ++ ++Y+G + ++V +K + E F V ++ H N+++L+G
Sbjct: 21 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK-EIKHPNLVQLLGV 79
Query: 118 CIETEIPILVFEFVEYGTLAD--RICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFR 175
C ++ EF+ YG L D R C+ + LL+ +A +I +AM Y+ +
Sbjct: 80 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY-----MATQISSAMEYLE---K 131
Query: 176 RPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGL 235
+ + +D+ L E ++ K++DF S + G+T+ ++ APE +
Sbjct: 132 KNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAPAGAKFPIKWTAPESLAYNK 190
Query: 236 CNEKTDVFCFGMLLLELLT---GRRDNILLEHVKKHVENNRLGEIVDPIVVEDKSCPEKE 292
+ K+DV+ FG+LL E+ T I L V + +E + E + CPEK
Sbjct: 191 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME-------RPEGCPEK- 242
Query: 293 XXXXXXXXXIFECVNESAGDRPTMVYAAKQLRQMY 327
+ C + DRP+ + M+
Sbjct: 243 -----VYELMRACWQWNPSDRPSFAEIHQAFETMF 272
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 120/275 (43%), Gaps = 29/275 (10%)
Query: 59 HQVIASEHYKLYKGFLENRPISV-MKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGC 117
H++ ++ ++Y+G + ++V +K + E F V ++ H N+++L+G
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK-EIKHPNLVQLLGV 77
Query: 118 CIETEIPILVFEFVEYGTLAD--RICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFR 175
C ++ EF+ YG L D R C+ + LL+ +A +I +AM Y+ +
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY-----MATQISSAMEYLE---K 129
Query: 176 RPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGL 235
+ + +D+ L E ++ K++DF S + G+T+ ++ APE +
Sbjct: 130 KNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 236 CNEKTDVFCFGMLLLELLT---GRRDNILLEHVKKHVENNRLGEIVDPIVVEDKSCPEKE 292
+ K+DV+ FG+LL E+ T I L V + +E + E + CPEK
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME-------RPEGCPEK- 240
Query: 293 XXXXXXXXXIFECVNESAGDRPTMVYAAKQLRQMY 327
+ C + DRP+ + M+
Sbjct: 241 -----VYELMRACWQWNPSDRPSFAEIHQAFETMF 270
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 120/275 (43%), Gaps = 29/275 (10%)
Query: 59 HQVIASEHYKLYKGFLENRPISV-MKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGC 117
H++ ++ ++Y+G + ++V +K + E F V ++ H N+++L+G
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK-EIKHPNLVQLLGV 82
Query: 118 CIETEIPILVFEFVEYGTLAD--RICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFR 175
C ++ EF+ YG L D R C+ + LL+ +A +I +AM Y+ +
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY-----MATQISSAMEYLE---K 134
Query: 176 RPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGL 235
+ + +D+ L E ++ K++DF S + G+T+ ++ APE +
Sbjct: 135 KNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNK 193
Query: 236 CNEKTDVFCFGMLLLELLT---GRRDNILLEHVKKHVENNRLGEIVDPIVVEDKSCPEKE 292
+ K+DV+ FG+LL E+ T I L V + +E + E + CPEK
Sbjct: 194 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME-------RPEGCPEK- 245
Query: 293 XXXXXXXXXIFECVNESAGDRPTMVYAAKQLRQMY 327
+ C + DRP+ + M+
Sbjct: 246 -----VYELMRACWQWNPSDRPSFAEIHQAFETMF 275
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 120/275 (43%), Gaps = 29/275 (10%)
Query: 59 HQVIASEHYKLYKGFLENRPISV-MKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGC 117
H++ ++ ++Y+G + ++V +K + E F V ++ H N+++L+G
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK-EIKHPNLVQLLGV 77
Query: 118 CIETEIPILVFEFVEYGTLAD--RICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFR 175
C ++ EF+ YG L D R C+ + LL+ +A +I +AM Y+ +
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY-----MATQISSAMEYLE---K 129
Query: 176 RPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGL 235
+ + +D+ L E ++ K++DF S + G+T+ ++ APE +
Sbjct: 130 KNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 236 CNEKTDVFCFGMLLLELLT---GRRDNILLEHVKKHVENNRLGEIVDPIVVEDKSCPEKE 292
+ K+DV+ FG+LL E+ T I L V + +E + E + CPEK
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME-------RPEGCPEK- 240
Query: 293 XXXXXXXXXIFECVNESAGDRPTMVYAAKQLRQMY 327
+ C + DRP+ + M+
Sbjct: 241 -----VYELMRACWQWNPSDRPSFAEIHQAFETMF 270
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 120/275 (43%), Gaps = 29/275 (10%)
Query: 59 HQVIASEHYKLYKGFLENRPISV-MKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGC 117
H++ ++ ++Y+G + ++V +K + E F V ++ H N+++L+G
Sbjct: 21 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK-EIKHPNLVQLLGV 79
Query: 118 CIETEIPILVFEFVEYGTLAD--RICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFR 175
C ++ EF+ YG L D R C+ + LL+ +A +I +AM Y+ +
Sbjct: 80 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY-----MATQISSAMEYLE---K 131
Query: 176 RPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGL 235
+ + +D+ L E ++ K++DF S + G+T+ ++ APE +
Sbjct: 132 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNK 190
Query: 236 CNEKTDVFCFGMLLLELLT---GRRDNILLEHVKKHVENNRLGEIVDPIVVEDKSCPEKE 292
+ K+DV+ FG+LL E+ T I L V + +E + E + CPEK
Sbjct: 191 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME-------RPEGCPEK- 242
Query: 293 XXXXXXXXXIFECVNESAGDRPTMVYAAKQLRQMY 327
+ C + DRP+ + M+
Sbjct: 243 -----VYELMRACWQWNPSDRPSFAEIHQAFETMF 272
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 120/275 (43%), Gaps = 29/275 (10%)
Query: 59 HQVIASEHYKLYKGFLENRPISV-MKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGC 117
H++ ++ ++Y+G + ++V +K + E F V ++ H N+++L+G
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK-EIKHPNLVQLLGV 82
Query: 118 CIETEIPILVFEFVEYGTLAD--RICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFR 175
C ++ EF+ YG L D R C+ + LL+ +A +I +AM Y+ +
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY-----MATQISSAMEYLE---K 134
Query: 176 RPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGL 235
+ + +D+ L E ++ K++DF S + G+T+ ++ APE +
Sbjct: 135 KNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNK 193
Query: 236 CNEKTDVFCFGMLLLELLT---GRRDNILLEHVKKHVENNRLGEIVDPIVVEDKSCPEKE 292
+ K+DV+ FG+LL E+ T I L V + +E + E + CPEK
Sbjct: 194 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME-------RPEGCPEK- 245
Query: 293 XXXXXXXXXIFECVNESAGDRPTMVYAAKQLRQMY 327
+ C + DRP+ + M+
Sbjct: 246 -----VYELMRACWQWNPSDRPSFAEIHQAFETMF 275
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 86/178 (48%), Gaps = 22/178 (12%)
Query: 103 AAQMNHRNILKLIGCC-IETE---IPILVFEFVEYGTLADRICSPHGPHLE-PLLWRHRL 157
AA +NH I+ + ET +P +V E+V+ TL D + H E P+ + +
Sbjct: 66 AAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV------HTEGPMTPKRAI 119
Query: 158 KIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVT-S 216
++ + A+ + H + I+ +D+K + I+ N K+ DF + I + VT +
Sbjct: 120 EVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 217 HMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTGR-------RDNILLEHVKK 267
+ T +YL+PE + ++DV+ G +L E+LTG D++ +HV++
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVRE 234
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 120/275 (43%), Gaps = 29/275 (10%)
Query: 59 HQVIASEHYKLYKGFLENRPISV-MKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGC 117
H++ ++ ++Y+G + ++V +K + E F V ++ H N+++L+G
Sbjct: 21 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK-EIKHPNLVQLLGV 79
Query: 118 CIETEIPILVFEFVEYGTLAD--RICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFR 175
C ++ EF+ YG L D R C+ + LL+ +A +I +AM Y+ +
Sbjct: 80 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY-----MATQISSAMEYLE---K 131
Query: 176 RPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGL 235
+ + +D+ L E ++ K++DF S + G+T+ ++ APE +
Sbjct: 132 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNK 190
Query: 236 CNEKTDVFCFGMLLLELLT---GRRDNILLEHVKKHVENNRLGEIVDPIVVEDKSCPEKE 292
+ K+DV+ FG+LL E+ T I L V + +E + E + CPEK
Sbjct: 191 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME-------RPEGCPEK- 242
Query: 293 XXXXXXXXXIFECVNESAGDRPTMVYAAKQLRQMY 327
+ C + DRP+ + M+
Sbjct: 243 -----VYELMRACWQWNPSDRPSFAEIHQAFETMF 272
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 120/275 (43%), Gaps = 29/275 (10%)
Query: 59 HQVIASEHYKLYKGFLENRPISV-MKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGC 117
H++ ++ ++Y+G + ++V +K + E F V ++ H N+++L+G
Sbjct: 32 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK-EIKHPNLVQLLGV 90
Query: 118 CIETEIPILVFEFVEYGTLAD--RICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFR 175
C ++ EF+ YG L D R C+ + LL+ +A +I +AM Y+ +
Sbjct: 91 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY-----MATQISSAMEYLE---K 142
Query: 176 RPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGL 235
+ + +D+ L E ++ K++DF S + G+T+ ++ APE +
Sbjct: 143 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNK 201
Query: 236 CNEKTDVFCFGMLLLELLT---GRRDNILLEHVKKHVENNRLGEIVDPIVVEDKSCPEKE 292
+ K+DV+ FG+LL E+ T I L V + +E + E + CPEK
Sbjct: 202 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME-------RPEGCPEK- 253
Query: 293 XXXXXXXXXIFECVNESAGDRPTMVYAAKQLRQMY 327
+ C + DRP+ + M+
Sbjct: 254 -----VYELMRACWQWNPSDRPSFAEIHQAFETMF 283
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 119/275 (43%), Gaps = 29/275 (10%)
Query: 59 HQVIASEHYKLYKGFLENRPISV-MKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGC 117
H++ ++ ++Y+G + ++V +K + E F V ++ H N+++L+G
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK-EIKHPNLVQLLGV 77
Query: 118 CIETEIPILVFEFVEYGTLAD--RICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFR 175
C ++ EF+ YG L D R C+ LL+ +A +I +AM Y+ +
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY-----MATQISSAMEYLE---K 129
Query: 176 RPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGL 235
+ + +D+ L E ++ K++DF S + G+T+ ++ APE +
Sbjct: 130 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 236 CNEKTDVFCFGMLLLELLT---GRRDNILLEHVKKHVENNRLGEIVDPIVVEDKSCPEKE 292
+ K+DV+ FG+LL E+ T I L V + +E + E + CPEK
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME-------RPEGCPEK- 240
Query: 293 XXXXXXXXXIFECVNESAGDRPTMVYAAKQLRQMY 327
+ C + DRP+ + M+
Sbjct: 241 -----VYELMRACWQWNPSDRPSFAEIHQAFETMF 270
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 119/275 (43%), Gaps = 29/275 (10%)
Query: 59 HQVIASEHYKLYKGFLENRPISV-MKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGC 117
H++ ++ ++Y+G + ++V +K + E F V ++ H N+++L+G
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK-EIKHPNLVQLLGV 82
Query: 118 CIETEIPILVFEFVEYGTLAD--RICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFR 175
C ++ EF+ YG L D R C+ LL+ +A +I +AM Y+ +
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY-----MATQISSAMEYLE---K 134
Query: 176 RPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGL 235
+ + +D+ L E ++ K++DF S + G+T+ ++ APE +
Sbjct: 135 KNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNK 193
Query: 236 CNEKTDVFCFGMLLLELLT---GRRDNILLEHVKKHVENNRLGEIVDPIVVEDKSCPEKE 292
+ K+DV+ FG+LL E+ T I L V + +E + E + CPEK
Sbjct: 194 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME-------RPEGCPEK- 245
Query: 293 XXXXXXXXXIFECVNESAGDRPTMVYAAKQLRQMY 327
+ C + DRP+ + M+
Sbjct: 246 -----VYELMRACWQWNPSDRPSFAEIHQAFETMF 275
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 119/275 (43%), Gaps = 29/275 (10%)
Query: 59 HQVIASEHYKLYKGFLENRPISV-MKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGC 117
H++ ++ ++Y+G + ++V +K + E F V ++ H N+++L+G
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK-EIKHPNLVQLLGV 77
Query: 118 CIETEIPILVFEFVEYGTLAD--RICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFR 175
C ++ EF+ YG L D R C+ LL+ +A +I +AM Y+ +
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY-----MATQISSAMEYLE---K 129
Query: 176 RPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGL 235
+ + +D+ L E ++ K++DF S + G+T+ ++ APE +
Sbjct: 130 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 236 CNEKTDVFCFGMLLLELLT---GRRDNILLEHVKKHVENNRLGEIVDPIVVEDKSCPEKE 292
+ K+DV+ FG+LL E+ T I L V + +E + E + CPEK
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME-------RPEGCPEK- 240
Query: 293 XXXXXXXXXIFECVNESAGDRPTMVYAAKQLRQMY 327
+ C + DRP+ + M+
Sbjct: 241 -----VYELMRACWQWNPSDRPSFAEIHQAFETMF 270
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 119/275 (43%), Gaps = 29/275 (10%)
Query: 59 HQVIASEHYKLYKGFLENRPISV-MKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGC 117
H++ ++ ++Y+G + ++V +K + E F V ++ H N+++L+G
Sbjct: 20 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK-EIKHPNLVQLLGV 78
Query: 118 CIETEIPILVFEFVEYGTLAD--RICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFR 175
C ++ EF+ YG L D R C+ + LL+ +A +I +AM Y+ +
Sbjct: 79 CTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLY-----MATQISSAMEYLE---K 130
Query: 176 RPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGL 235
+ + +D+ L E ++ K++DF S + G+T ++ APE +
Sbjct: 131 KNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAYNK 189
Query: 236 CNEKTDVFCFGMLLLELLT---GRRDNILLEHVKKHVENNRLGEIVDPIVVEDKSCPEKE 292
+ K+DV+ FG+LL E+ T I L V + +E + E + CPEK
Sbjct: 190 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME-------RPEGCPEK- 241
Query: 293 XXXXXXXXXIFECVNESAGDRPTMVYAAKQLRQMY 327
+ C + DRP+ + M+
Sbjct: 242 -----VYELMRACWQWNPSDRPSFAEIHQAFETMF 271
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 76/154 (49%), Gaps = 10/154 (6%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLE-PLLWRHRLKIAMEI 163
++ H +++L E I +V E++ G+L D + G +L P L + +A +I
Sbjct: 318 KLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQL----VDMAAQI 372
Query: 164 GNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTK 223
+ MAY+ R V +D++ + IL E V K++DF + I + E +
Sbjct: 373 ASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPI 428
Query: 224 RYLAPEYILTGLCNEKTDVFCFGMLLLELLTGRR 257
++ APE L G K+DV+ FG+LL EL T R
Sbjct: 429 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 462
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 76/154 (49%), Gaps = 10/154 (6%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLE-PLLWRHRLKIAMEI 163
++ H +++L E I I V E++ G+L D + G +L P L + +A +I
Sbjct: 235 KLRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGETGKYLRLPQL----VDMAAQI 289
Query: 164 GNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTK 223
+ MAY+ R V +D++ + IL E V K++DF + I + E +
Sbjct: 290 ASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPI 345
Query: 224 RYLAPEYILTGLCNEKTDVFCFGMLLLELLTGRR 257
++ APE L G K+DV+ FG+LL EL T R
Sbjct: 346 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 379
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 76/154 (49%), Gaps = 10/154 (6%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLE-PLLWRHRLKIAMEI 163
++ H +++L E I I V E++ G+L D + G +L P L + +A +I
Sbjct: 235 KLRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGETGKYLRLPQL----VDMAAQI 289
Query: 164 GNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTK 223
+ MAY+ R V +D++ + IL E V K++DF + I + E +
Sbjct: 290 ASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPI 345
Query: 224 RYLAPEYILTGLCNEKTDVFCFGMLLLELLTGRR 257
++ APE L G K+DV+ FG+LL EL T R
Sbjct: 346 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 379
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 81/189 (42%), Gaps = 13/189 (6%)
Query: 75 ENRPISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYG 134
+++ + +K + S+N + H +I+K G C+E + I+VFE++++G
Sbjct: 41 QDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHG 100
Query: 135 TLADRICSPHGPHL---------EPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKL 185
L ++ HGP L L IA +I M Y+ + V +D+
Sbjct: 101 DL-NKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYL---ASQHFVHRDLAT 156
Query: 186 SQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCF 245
L E + K+ DF S + + + R++ PE I+ ++DV+
Sbjct: 157 RNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSL 216
Query: 246 GMLLLELLT 254
G++L E+ T
Sbjct: 217 GVVLWEIFT 225
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 76/158 (48%), Gaps = 13/158 (8%)
Query: 107 NHRNILKLIGCCIETEIPILVF-EFVEYGTLADRICS------PHGP---HLEPLLWRHR 156
+H N++ L+G C + P++V EF ++G L+ + S P+ P + + L H
Sbjct: 91 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHL 150
Query: 157 LKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTS 216
+ + ++ M ++ R + +D+ IL E NV K+ DF + I + V
Sbjct: 151 IXYSFQVAKGMEFLA---SRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 207
Query: 217 HMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+++APE I + ++DV+ FG+LL E+ +
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 72/151 (47%), Gaps = 9/151 (5%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAME-I 163
Q +H NI++LIG C + + +V E V+ G + + R R+K ++ +
Sbjct: 168 QYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGA--------RLRVKTLLQMV 219
Query: 164 GNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTK 223
G+A A + + + +D+ L E NV K+SDF S +G + +
Sbjct: 220 GDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPV 279
Query: 224 RYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
++ APE + G + ++DV+ FG+LL E +
Sbjct: 280 KWTAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 76/154 (49%), Gaps = 10/154 (6%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLE-PLLWRHRLKIAMEI 163
++ H +++L E I I V E++ G+L D + G +L P L + +A +I
Sbjct: 235 KLRHEKLVQLYAVVSEEPIYI-VGEYMSKGSLLDFLKGETGKYLRLPQL----VDMAAQI 289
Query: 164 GNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTK 223
+ MAY+ R V +D++ + IL E V K++DF + I + E +
Sbjct: 290 ASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPI 345
Query: 224 RYLAPEYILTGLCNEKTDVFCFGMLLLELLTGRR 257
++ APE L G K+DV+ FG+LL EL T R
Sbjct: 346 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 379
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 97/226 (42%), Gaps = 23/226 (10%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIG 164
++ H N+++L+G C +V E++ YG L D + + + ++ L +A +I
Sbjct: 84 EIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVV---LLYMATQIS 140
Query: 165 NAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKR 224
+AM Y+ ++ + +D+ L E +V K++DF S + G+T+ +
Sbjct: 141 SAMEYLE---KKNFIHRDLAARNCLVGENHVVKVADFGLSRLM-TGDTYTAHAGAKFPIK 196
Query: 225 YLAPEYILTGLCNEKTDVFCFGMLLLELLT---GRRDNILLEHVKKHVENNRLGEIVDPI 281
+ APE + + K+DV+ FG+LL E+ T I L V +E E
Sbjct: 197 WTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEKGYRME----- 251
Query: 282 VVEDKSCPEKEXXXXXXXXXIFECVNESAGDRPTMVYAAKQLRQMY 327
+ + CP K + C S DRP+ + M+
Sbjct: 252 --QPEGCPPK------VYELMRACWKWSPADRPSFAETHQAFETMF 289
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 119/275 (43%), Gaps = 29/275 (10%)
Query: 59 HQVIASEHYKLYKGFLENRPISV-MKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGC 117
H++ ++ ++Y+G + ++V +K + E F V ++ H N+++L+G
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK-EIKHPNLVQLLGV 82
Query: 118 CIETEIPILVFEFVEYGTLAD--RICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFR 175
C ++ EF+ YG L D R C+ + LL+ +A +I +AM Y+ +
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY-----MATQISSAMEYLE---K 134
Query: 176 RPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGL 235
+ + +D+ L E ++ K++DF S + G+T ++ APE +
Sbjct: 135 KNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAYNK 193
Query: 236 CNEKTDVFCFGMLLLELLT---GRRDNILLEHVKKHVENNRLGEIVDPIVVEDKSCPEKE 292
+ K+DV+ FG+LL E+ T I L V + +E + E + CPEK
Sbjct: 194 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME-------RPEGCPEK- 245
Query: 293 XXXXXXXXXIFECVNESAGDRPTMVYAAKQLRQMY 327
+ C + DRP+ + M+
Sbjct: 246 -----VYELMRACWQWNPSDRPSFAEIHQAFETMF 275
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 76/154 (49%), Gaps = 10/154 (6%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLE-PLLWRHRLKIAMEI 163
++ H +++L E I +V E++ G+L D + G +L P L + +A +I
Sbjct: 69 KLRHEKLVQLYAVVSEEPI-YIVIEYMSKGSLLDFLKGEMGKYLRLPQL----VDMAAQI 123
Query: 164 GNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTK 223
+ MAY+ R V +D++ + IL E V K++DF + I + E +
Sbjct: 124 ASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPI 179
Query: 224 RYLAPEYILTGLCNEKTDVFCFGMLLLELLTGRR 257
++ APE L G K+DV+ FG+LL EL T R
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 78/159 (49%), Gaps = 15/159 (9%)
Query: 103 AAQMNHRNILKLIGCC-IETE---IPILVFEFVEYGTLADRICSPHGPHLE-PLLWRHRL 157
AA +NH I+ + ET +P +V E+V+ TL D + H E P+ + +
Sbjct: 66 AAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIV------HTEGPMTPKRAI 119
Query: 158 KIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVT-S 216
++ + A+ + H + I+ +D+K + I+ N K+ DF + I + VT +
Sbjct: 120 EVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 217 HMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
+ T +YL+PE + ++DV+ G +L E+LTG
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 75/154 (48%), Gaps = 10/154 (6%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLE-PLLWRHRLKIAMEI 163
++ H +++L E I I V E++ G+L D + G +L P L + +A +I
Sbjct: 236 KLRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGEMGKYLRLPQL----VDMAAQI 290
Query: 164 GNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTK 223
+ MAY+ R V +D++ + IL E V K++DF I + E +
Sbjct: 291 ASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNE-YTARQGAKFPI 346
Query: 224 RYLAPEYILTGLCNEKTDVFCFGMLLLELLTGRR 257
++ APE L G K+DV+ FG+LL EL T R
Sbjct: 347 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 380
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 99/231 (42%), Gaps = 31/231 (13%)
Query: 106 MNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGN 165
+ H +++L + E ++ EF+ G+L D + S G + L + + +I
Sbjct: 64 LQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKV---LLPKLIDFSAQIAE 120
Query: 166 AMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRY 225
MAYI R+ + +D++ + +L E + K++DF + I + E + ++
Sbjct: 121 GMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNE-YTAREGAKFPIKW 176
Query: 226 LAPEYILTGLCNEKTDVFCFGMLLLELLT-------GRRDNILLEHVKKHVENNRLGEIV 278
APE I G K++V+ FG+LL E++T GR + ++ + + R+
Sbjct: 177 TAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRMPRM---- 232
Query: 279 DPIVVEDKSCPEKEXXXXXXXXXIFECVNESAGDRPTMVYAAKQLRQMYLS 329
++CP++ C E A +RPT Y L Y +
Sbjct: 233 -------ENCPDELYDIMKM------CWKEKAEERPTFDYLQSVLDDFYTA 270
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 72/151 (47%), Gaps = 9/151 (5%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAME-I 163
Q +H NI++LIG C + + +V E V+ G + + R R+K ++ +
Sbjct: 168 QYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGA--------RLRVKTLLQMV 219
Query: 164 GNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTK 223
G+A A + + + +D+ L E NV K+SDF S +G + +
Sbjct: 220 GDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPV 279
Query: 224 RYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
++ APE + G + ++DV+ FG+LL E +
Sbjct: 280 KWTAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 100/228 (43%), Gaps = 27/228 (11%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTLAD--RICSPHGPHLEPLLWRHRLKIAME 162
++ H N+++L+G C ++ EF+ YG L D R C+ + LL+ +A +
Sbjct: 269 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY-----MATQ 323
Query: 163 IGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRT 222
I +AM Y+ ++ + +++ L E ++ K++DF S + G+T+
Sbjct: 324 ISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFP 379
Query: 223 KRYLAPEYILTGLCNEKTDVFCFGMLLLELLT---GRRDNILLEHVKKHVENNRLGEIVD 279
++ APE + + K+DV+ FG+LL E+ T I L V + +E + E
Sbjct: 380 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME--- 436
Query: 280 PIVVEDKSCPEKEXXXXXXXXXIFECVNESAGDRPTMVYAAKQLRQMY 327
+ CPEK + C + DRP+ + M+
Sbjct: 437 ----RPEGCPEK------VYELMRACWQWNPSDRPSFAEIHQAFETMF 474
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 76/154 (49%), Gaps = 10/154 (6%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLE-PLLWRHRLKIAMEI 163
++ H +++L E I +V E++ G+L D + G +L P L + +A +I
Sbjct: 69 KLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQL----VDMAAQI 123
Query: 164 GNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTK 223
+ MAY+ R V +D++ + IL E V K++DF + I + E +
Sbjct: 124 ASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPI 179
Query: 224 RYLAPEYILTGLCNEKTDVFCFGMLLLELLTGRR 257
++ APE L G K+DV+ FG+LL EL T R
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 78/159 (49%), Gaps = 15/159 (9%)
Query: 103 AAQMNHRNILKLIGCC-IETE---IPILVFEFVEYGTLADRICSPHGPHLE-PLLWRHRL 157
AA +NH I+ + ET +P +V E+V+ TL D + H E P+ + +
Sbjct: 66 AAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV------HTEGPMTPKRAI 119
Query: 158 KIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVT-S 216
++ + A+ + H + I+ +D+K + I+ N K+ DF + I + VT +
Sbjct: 120 EVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 217 HMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
+ T +YL+PE + ++DV+ G +L E+LTG
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 99/231 (42%), Gaps = 31/231 (13%)
Query: 106 MNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGN 165
+ H +++L E ++ E++ G+L D + S G + L + + +I
Sbjct: 65 LQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKV---LLPKLIDFSAQIAE 121
Query: 166 AMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRY 225
MAYI R+ + +D++ + +L E + K++DF + I + E + ++
Sbjct: 122 GMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNE-YTAREGAKFPIKW 177
Query: 226 LAPEYILTGLCNEKTDVFCFGMLLLELLT-------GRRDNILLEHVKKHVENNRLGEIV 278
APE I G K+DV+ FG+LL E++T GR + ++ + + R+
Sbjct: 178 TAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGYRMPRV---- 233
Query: 279 DPIVVEDKSCPEKEXXXXXXXXXIFECVNESAGDRPTMVYAAKQLRQMYLS 329
++CP++ + C E A +RPT Y L Y +
Sbjct: 234 -------ENCPDE------LYDIMKMCWKEKAEERPTFDYLQSVLDDFYTA 271
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 76/154 (49%), Gaps = 10/154 (6%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLE-PLLWRHRLKIAMEI 163
++ H +++L E I +V E++ G+L D + G +L P L + +A +I
Sbjct: 62 KLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQL----VDMAAQI 116
Query: 164 GNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTK 223
+ MAY+ R V +D++ + IL E V K++DF + I + E +
Sbjct: 117 ASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPI 172
Query: 224 RYLAPEYILTGLCNEKTDVFCFGMLLLELLTGRR 257
++ APE L G K+DV+ FG+LL EL T R
Sbjct: 173 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 206
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 75/154 (48%), Gaps = 10/154 (6%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLE-PLLWRHRLKIAMEI 163
++ H +++L E I +V E++ G+L D + G +L P L + +A +I
Sbjct: 69 KLRHEKLVQLYAVVSEEPI-YIVIEYMSKGSLLDFLKGEMGKYLRLPQL----VDMAAQI 123
Query: 164 GNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTK 223
+ MAY+ R V +D++ + IL E V K++DF + I + E K
Sbjct: 124 ASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIK 180
Query: 224 RYLAPEYILTGLCNEKTDVFCFGMLLLELLTGRR 257
+ APE L G K+DV+ FG+LL EL T R
Sbjct: 181 -WTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 75/154 (48%), Gaps = 10/154 (6%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLE-PLLWRHRLKIAMEI 163
++ H +++L E I I V E++ G+L D + G +L P L + +A +I
Sbjct: 59 KLRHEKLVQLYAVVSEEPIXI-VTEYMSKGSLLDFLKGETGKYLRLPQL----VDMAAQI 113
Query: 164 GNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTK 223
+ MAY+ R V +D++ + IL E V K++DF + I + E K
Sbjct: 114 ASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIK 170
Query: 224 RYLAPEYILTGLCNEKTDVFCFGMLLLELLTGRR 257
+ APE L G K+DV+ FG+LL EL T R
Sbjct: 171 -WTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 203
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 76/154 (49%), Gaps = 10/154 (6%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLE-PLLWRHRLKIAMEI 163
++ H +++L E I +V E++ G+L D + G +L P L + +A +I
Sbjct: 60 KLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQL----VDMAAQI 114
Query: 164 GNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTK 223
+ MAY+ R V +D++ + IL E V K++DF + I + E +
Sbjct: 115 ASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPI 170
Query: 224 RYLAPEYILTGLCNEKTDVFCFGMLLLELLTGRR 257
++ APE L G K+DV+ FG+LL EL T R
Sbjct: 171 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 204
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 78/159 (49%), Gaps = 15/159 (9%)
Query: 103 AAQMNHRNILKLIGCC-IETE---IPILVFEFVEYGTLADRICSPHGPHLE-PLLWRHRL 157
AA +NH I+ + ET +P +V E+V+ TL D + H E P+ + +
Sbjct: 66 AAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV------HTEGPMTPKRAI 119
Query: 158 KIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVT-S 216
++ + A+ + H + I+ +D+K + I+ N K+ DF + I + VT +
Sbjct: 120 EVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 217 HMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
+ T +YL+PE + ++DV+ G +L E+LTG
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 100/228 (43%), Gaps = 27/228 (11%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTLAD--RICSPHGPHLEPLLWRHRLKIAME 162
++ H N+++L+G C ++ EF+ YG L D R C+ + LL+ +A +
Sbjct: 311 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY-----MATQ 365
Query: 163 IGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRT 222
I +AM Y+ ++ + +++ L E ++ K++DF S + G+T+
Sbjct: 366 ISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFP 421
Query: 223 KRYLAPEYILTGLCNEKTDVFCFGMLLLELLT---GRRDNILLEHVKKHVENNRLGEIVD 279
++ APE + + K+DV+ FG+LL E+ T I L V + +E + E
Sbjct: 422 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME--- 478
Query: 280 PIVVEDKSCPEKEXXXXXXXXXIFECVNESAGDRPTMVYAAKQLRQMY 327
+ CPEK + C + DRP+ + M+
Sbjct: 479 ----RPEGCPEK------VYELMRACWQWNPSDRPSFAEIHQAFETMF 516
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 95/199 (47%), Gaps = 13/199 (6%)
Query: 59 HQVIASEHYKLYKGFLENRPISV-MKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGC 117
H++ ++ ++Y+G + ++V +K + E F V ++ H N+++L+G
Sbjct: 17 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK-EIKHPNLVQLLGV 75
Query: 118 CIETEIPILVFEFVEYGTLAD--RICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFR 175
C ++ EF+ YG L D R C+ LL+ +A +I +AM Y+ +
Sbjct: 76 CTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLY-----MATQISSAMEYLE---K 127
Query: 176 RPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGL 235
+ + +D+ L E ++ K++DF S + G+T ++ APE +
Sbjct: 128 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPESLAYNK 186
Query: 236 CNEKTDVFCFGMLLLELLT 254
+ K+DV+ FG+LL E+ T
Sbjct: 187 FSIKSDVWAFGVLLWEIAT 205
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 78/159 (49%), Gaps = 15/159 (9%)
Query: 103 AAQMNHRNILKLIGCC-IETE---IPILVFEFVEYGTLADRICSPHGPHLE-PLLWRHRL 157
AA +NH I+ + ET +P +V E+V+ TL D + H E P+ + +
Sbjct: 83 AAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV------HTEGPMTPKRAI 136
Query: 158 KIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVT-S 216
++ + A+ + H + I+ +D+K + I+ N K+ DF + I + VT +
Sbjct: 137 EVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 193
Query: 217 HMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
+ T +YL+PE + ++DV+ G +L E+LTG
Sbjct: 194 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 232
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 76/154 (49%), Gaps = 10/154 (6%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLE-PLLWRHRLKIAMEI 163
++ H +++L E I +V E++ G+L D + G +L P L + +A +I
Sbjct: 58 KLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQL----VDMAAQI 112
Query: 164 GNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTK 223
+ MAY+ R V +D++ + IL E V K++DF + I + E +
Sbjct: 113 ASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPI 168
Query: 224 RYLAPEYILTGLCNEKTDVFCFGMLLLELLTGRR 257
++ APE L G K+DV+ FG+LL EL T R
Sbjct: 169 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 202
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 76/154 (49%), Gaps = 10/154 (6%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLE-PLLWRHRLKIAMEI 163
++ H +++L E I +V E++ G+L D + G +L P L + +A +I
Sbjct: 69 KIRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQL----VDMAAQI 123
Query: 164 GNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTK 223
+ MAY+ R V +D++ + IL E V K++DF + I + E +
Sbjct: 124 ASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPI 179
Query: 224 RYLAPEYILTGLCNEKTDVFCFGMLLLELLTGRR 257
++ APE L G K+DV+ FG+LL EL T R
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 79/181 (43%), Gaps = 14/181 (7%)
Query: 78 PISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLA 137
P+++ Y+E + Q +H NI++L G + ++V E++E G+L
Sbjct: 79 PVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSL- 137
Query: 138 DRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIH-IGFRRPIVFKDIKLSQILFDEYNVA 196
D H + + + +G M Y+ +G+ V +D+ +L D V
Sbjct: 138 DTFLRTHDGQFTIM---QLVGMLRGVGAGMRYLSDLGY----VHRDLAARNVLVDSNLVC 190
Query: 197 KLSDFSESEYI---PEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELL 253
K+SDF S + P+ T + R+ APE I + +DV+ FG+++ E+L
Sbjct: 191 KVSDFGLSRVLEDDPDAAXTTTGGKI--PIRWTAPEAIAFRTFSSASDVWSFGVVMWEVL 248
Query: 254 T 254
Sbjct: 249 A 249
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 99/228 (43%), Gaps = 27/228 (11%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTLAD--RICSPHGPHLEPLLWRHRLKIAME 162
++ H N+++L+G C ++ EF+ YG L D R C+ LL+ +A +
Sbjct: 272 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY-----MATQ 326
Query: 163 IGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRT 222
I +AM Y+ ++ + +++ L E ++ K++DF S + G+T+
Sbjct: 327 ISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFP 382
Query: 223 KRYLAPEYILTGLCNEKTDVFCFGMLLLELLT---GRRDNILLEHVKKHVENNRLGEIVD 279
++ APE + + K+DV+ FG+LL E+ T I L V + +E + E
Sbjct: 383 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME--- 439
Query: 280 PIVVEDKSCPEKEXXXXXXXXXIFECVNESAGDRPTMVYAAKQLRQMY 327
+ CPEK + C + DRP+ + M+
Sbjct: 440 ----RPEGCPEK------VYELMRACWQWNPSDRPSFAEIHQAFETMF 477
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 93/227 (40%), Gaps = 24/227 (10%)
Query: 106 MNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGN 165
++HRN+++L G + + +V E G+L DR+ G L L R+ A+++
Sbjct: 72 LDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRY----AVQVAE 126
Query: 166 AMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTK-R 224
M Y+ + + +D+ +L ++ K+ DF +P+ + H +
Sbjct: 127 GMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA 183
Query: 225 YLAPEYILTGLCNEKTDVFCFGMLLLELLT-GRRDNILLEHVKKHVENNRLGEIVDPIVV 283
+ APE + T + +D + FG+ L E+ T G+ I L +I+ I
Sbjct: 184 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG----------SQILHKIDK 233
Query: 284 EDKSCPEKEXXXXXXXXXIFECVNESAGDRPTMVYAAKQLRQMYLSA 330
E + P E + +C DRPT V LR L A
Sbjct: 234 EGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFV----ALRDFLLEA 276
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 76/154 (49%), Gaps = 10/154 (6%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLE-PLLWRHRLKIAMEI 163
++ H +++L E I +V E++ G+L D + G +L P L + +A +I
Sbjct: 69 KLRHEKLVQLYAVVSEEPI-YIVCEYMSKGSLLDFLKGEMGKYLRLPQL----VDMAAQI 123
Query: 164 GNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTK 223
+ MAY+ R V +D++ + IL E V K++DF + I + E +
Sbjct: 124 ASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPI 179
Query: 224 RYLAPEYILTGLCNEKTDVFCFGMLLLELLTGRR 257
++ APE L G K+DV+ FG+LL EL T R
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 78/159 (49%), Gaps = 15/159 (9%)
Query: 103 AAQMNHRNILKLIGCC-IETE---IPILVFEFVEYGTLADRICSPHGPHLE-PLLWRHRL 157
AA +NH I+ + ET +P +V E+V+ TL D + H E P+ + +
Sbjct: 66 AAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV------HTEGPMTPKRAI 119
Query: 158 KIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPE-GETHVTS 216
++ + A+ + H + I+ +D+K + IL N K+ DF + I + G + +
Sbjct: 120 EVIADACQALNFSH---QNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQT 176
Query: 217 HMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
+ T +YL+PE + ++DV+ G +L E+LTG
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 75/154 (48%), Gaps = 10/154 (6%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLE-PLLWRHRLKIAMEI 163
++ H +++L E I I V E++ G L D + G +L P L + +A +I
Sbjct: 69 KLRHEKLVQLYAVVSEEPIYI-VMEYMSKGCLLDFLKGEMGKYLRLPQL----VDMAAQI 123
Query: 164 GNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTK 223
+ MAY+ R V +D++ + IL E V K++DF + I + E +
Sbjct: 124 ASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPI 179
Query: 224 RYLAPEYILTGLCNEKTDVFCFGMLLLELLTGRR 257
++ APE L G K+DV+ FG+LL EL T R
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 93/227 (40%), Gaps = 24/227 (10%)
Query: 106 MNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGN 165
++HRN+++L G + + +V E G+L DR+ G L L R+ A+++
Sbjct: 72 LDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRY----AVQVAE 126
Query: 166 AMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTK-R 224
M Y+ + + +D+ +L ++ K+ DF +P+ + H +
Sbjct: 127 GMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA 183
Query: 225 YLAPEYILTGLCNEKTDVFCFGMLLLELLT-GRRDNILLEHVKKHVENNRLGEIVDPIVV 283
+ APE + T + +D + FG+ L E+ T G+ I L +I+ I
Sbjct: 184 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG----------SQILHKIDK 233
Query: 284 EDKSCPEKEXXXXXXXXXIFECVNESAGDRPTMVYAAKQLRQMYLSA 330
E + P E + +C DRPT V LR L A
Sbjct: 234 EGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFV----ALRDFLLEA 276
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 93/227 (40%), Gaps = 24/227 (10%)
Query: 106 MNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGN 165
++HRN+++L G + + +V E G+L DR+ G L L R+ A+++
Sbjct: 68 LDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRY----AVQVAE 122
Query: 166 AMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTK-R 224
M Y+ + + +D+ +L ++ K+ DF +P+ + H +
Sbjct: 123 GMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA 179
Query: 225 YLAPEYILTGLCNEKTDVFCFGMLLLELLT-GRRDNILLEHVKKHVENNRLGEIVDPIVV 283
+ APE + T + +D + FG+ L E+ T G+ I L +I+ I
Sbjct: 180 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG----------SQILHKIDK 229
Query: 284 EDKSCPEKEXXXXXXXXXIFECVNESAGDRPTMVYAAKQLRQMYLSA 330
E + P E + +C DRPT V LR L A
Sbjct: 230 EGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFV----ALRDFLLEA 272
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 93/227 (40%), Gaps = 24/227 (10%)
Query: 106 MNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGN 165
++HRN+++L G + + +V E G+L DR+ G L L R+ A+++
Sbjct: 78 LDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRY----AVQVAE 132
Query: 166 AMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTK-R 224
M Y+ + + +D+ +L ++ K+ DF +P+ + H +
Sbjct: 133 GMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFA 189
Query: 225 YLAPEYILTGLCNEKTDVFCFGMLLLELLT-GRRDNILLEHVKKHVENNRLGEIVDPIVV 283
+ APE + T + +D + FG+ L E+ T G+ I L +I+ I
Sbjct: 190 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG----------SQILHKIDK 239
Query: 284 EDKSCPEKEXXXXXXXXXIFECVNESAGDRPTMVYAAKQLRQMYLSA 330
E + P E + +C DRPT V LR L A
Sbjct: 240 EGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFV----ALRDFLLEA 282
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 93/227 (40%), Gaps = 24/227 (10%)
Query: 106 MNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGN 165
++HRN+++L G + + +V E G+L DR+ G L L R+ A+++
Sbjct: 68 LDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRY----AVQVAE 122
Query: 166 AMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTK-R 224
M Y+ + + +D+ +L ++ K+ DF +P+ + H +
Sbjct: 123 GMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFA 179
Query: 225 YLAPEYILTGLCNEKTDVFCFGMLLLELLT-GRRDNILLEHVKKHVENNRLGEIVDPIVV 283
+ APE + T + +D + FG+ L E+ T G+ I L +I+ I
Sbjct: 180 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG----------SQILHKIDK 229
Query: 284 EDKSCPEKEXXXXXXXXXIFECVNESAGDRPTMVYAAKQLRQMYLSA 330
E + P E + +C DRPT V LR L A
Sbjct: 230 EGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFV----ALRDFLLEA 272
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 74/156 (47%), Gaps = 11/156 (7%)
Query: 107 NHRNILKLIGCCIETEIPILVF-EFVEYGTLADRICSPHGPHL-------EPLLWRHRLK 158
+H N++ L+G C + P++V EF ++G L+ + S + + L H +
Sbjct: 89 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIX 148
Query: 159 IAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHM 218
+ ++ M ++ R + +D+ IL E NV K+ DF + I + +V
Sbjct: 149 YSFQVAKGMEFLA---SRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGD 205
Query: 219 LTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+++APE I + ++DV+ FG+LL E+ +
Sbjct: 206 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 93/227 (40%), Gaps = 24/227 (10%)
Query: 106 MNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGN 165
++HRN+++L G + + +V E G+L DR+ G L L R+ A+++
Sbjct: 68 LDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRY----AVQVAE 122
Query: 166 AMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTK-R 224
M Y+ + + +D+ +L ++ K+ DF +P+ + H +
Sbjct: 123 GMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA 179
Query: 225 YLAPEYILTGLCNEKTDVFCFGMLLLELLT-GRRDNILLEHVKKHVENNRLGEIVDPIVV 283
+ APE + T + +D + FG+ L E+ T G+ I L +I+ I
Sbjct: 180 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG----------SQILHKIDK 229
Query: 284 EDKSCPEKEXXXXXXXXXIFECVNESAGDRPTMVYAAKQLRQMYLSA 330
E + P E + +C DRPT V LR L A
Sbjct: 230 EGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFV----ALRDFLLEA 272
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 79/181 (43%), Gaps = 14/181 (7%)
Query: 78 PISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLA 137
P+++ Y+E + Q +H NI++L G + ++V E++E G+L
Sbjct: 79 PVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSL- 137
Query: 138 DRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIH-IGFRRPIVFKDIKLSQILFDEYNVA 196
D H + + + +G M Y+ +G+ V +D+ +L D V
Sbjct: 138 DTFLRTHDGQFTIM---QLVGMLRGVGAGMRYLSDLGY----VHRDLAARNVLVDSNLVC 190
Query: 197 KLSDFSESEYI---PEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELL 253
K+SDF S + P+ T + R+ APE I + +DV+ FG+++ E+L
Sbjct: 191 KVSDFGLSRVLEDDPDAAYTTTGGKI--PIRWTAPEAIAFRTFSSASDVWSFGVVMWEVL 248
Query: 254 T 254
Sbjct: 249 A 249
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 95/199 (47%), Gaps = 13/199 (6%)
Query: 59 HQVIASEHYKLYKGFLENRPISV-MKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGC 117
H++ ++ ++Y+G + ++V +K + E F V ++ H N+++L+G
Sbjct: 17 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK-EIKHPNLVQLLGV 75
Query: 118 CIETEIPILVFEFVEYGTLAD--RICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFR 175
C ++ EF+ YG L D R C+ LL+ +A +I +AM Y+ +
Sbjct: 76 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY-----MATQISSAMEYLE---K 127
Query: 176 RPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGL 235
+ + +D+ L E ++ K++DF S + G+T ++ APE +
Sbjct: 128 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTFTAHAGAKFPIKWTAPESLAYNK 186
Query: 236 CNEKTDVFCFGMLLLELLT 254
+ K+DV+ FG+LL E+ T
Sbjct: 187 FSIKSDVWAFGVLLWEIAT 205
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 75/160 (46%), Gaps = 15/160 (9%)
Query: 107 NHRNILKLIGCCIETEIPILVF-EFVEYGTLADRICS-----------PHGPHLEPLLWR 154
+H N++ L+G C + P++V EF ++G L+ + S P + + L
Sbjct: 80 HHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 139
Query: 155 HRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHV 214
H + + ++ M ++ R + +D+ IL E NV K+ DF + I + +V
Sbjct: 140 HLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 196
Query: 215 TSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+++APE I + ++DV+ FG+LL E+ +
Sbjct: 197 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 75/160 (46%), Gaps = 15/160 (9%)
Query: 107 NHRNILKLIGCCIETEIPILVF-EFVEYGTLADRI-----------CSPHGPHLEPLLWR 154
+H N++ L+G C + P++V EF ++G L+ + +P + + L
Sbjct: 80 HHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 139
Query: 155 HRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHV 214
H + + ++ M ++ R + +D+ IL E NV K+ DF + I + +V
Sbjct: 140 HLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 196
Query: 215 TSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+++APE I + ++DV+ FG+LL E+ +
Sbjct: 197 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 93/227 (40%), Gaps = 24/227 (10%)
Query: 106 MNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGN 165
++HRN+++L G + + +V E G+L DR+ G L L R+ A+++
Sbjct: 78 LDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRY----AVQVAE 132
Query: 166 AMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTK-R 224
M Y+ + + +D+ +L ++ K+ DF +P+ + H +
Sbjct: 133 GMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA 189
Query: 225 YLAPEYILTGLCNEKTDVFCFGMLLLELLT-GRRDNILLEHVKKHVENNRLGEIVDPIVV 283
+ APE + T + +D + FG+ L E+ T G+ I L +I+ I
Sbjct: 190 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG----------SQILHKIDK 239
Query: 284 EDKSCPEKEXXXXXXXXXIFECVNESAGDRPTMVYAAKQLRQMYLSA 330
E + P E + +C DRPT V LR L A
Sbjct: 240 EGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFV----ALRDFLLEA 282
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 75/154 (48%), Gaps = 10/154 (6%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLE-PLLWRHRLKIAMEI 163
++ H +++L E I +V E++ G+L D + G +L P L + +A +I
Sbjct: 69 KLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQL----VDMAAQI 123
Query: 164 GNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTK 223
+ MAY+ R V +D+ + IL E V K++DF + I + E +
Sbjct: 124 ASGMAYVE---RMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPI 179
Query: 224 RYLAPEYILTGLCNEKTDVFCFGMLLLELLTGRR 257
++ APE L G K+DV+ FG+LL EL T R
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 74/159 (46%), Gaps = 14/159 (8%)
Query: 107 NHRNILKLIGCCIETEIPILVF-EFVEYGTLADRICSPHG---PHLEP-------LLWRH 155
+H N++ L+G C + P++V EF ++G L+ + S P+ P L H
Sbjct: 90 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEH 149
Query: 156 RLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVT 215
+ + ++ M ++ R + +D+ IL E NV K+ DF + I + V
Sbjct: 150 LICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 206
Query: 216 SHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+++APE I + ++DV+ FG+LL E+ +
Sbjct: 207 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 75/160 (46%), Gaps = 15/160 (9%)
Query: 107 NHRNILKLIGCCIETEIPILVF-EFVEYGTLADRI-----------CSPHGPHLEPLLWR 154
+H N++ L+G C + P++V EF ++G L+ + +P + + L
Sbjct: 89 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 148
Query: 155 HRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHV 214
H + + ++ M ++ R + +D+ IL E NV K+ DF + I + +V
Sbjct: 149 HLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 205
Query: 215 TSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+++APE I + ++DV+ FG+LL E+ +
Sbjct: 206 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 75/152 (49%), Gaps = 11/152 (7%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTLAD--RICSPHGPHLEPLLWRHRLKIAME 162
++ H N+++L+G C ++ EF+ YG L D R C+ LL+ +A +
Sbjct: 63 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY-----MATQ 117
Query: 163 IGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRT 222
I +AM Y+ ++ + +D+ L E ++ K++DF S + G+T
Sbjct: 118 ISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTXTAHAGAKFP 173
Query: 223 KRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
++ APE + + K+DV+ FG+LL E+ T
Sbjct: 174 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 75/160 (46%), Gaps = 15/160 (9%)
Query: 107 NHRNILKLIGCCIETEIPILVF-EFVEYGTLADRI-----------CSPHGPHLEPLLWR 154
+H N++ L+G C + P++V EF ++G L+ + +P + + L
Sbjct: 126 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 185
Query: 155 HRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHV 214
H + + ++ M ++ R + +D+ IL E NV K+ DF + I + +V
Sbjct: 186 HLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 242
Query: 215 TSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+++APE I + ++DV+ FG+LL E+ +
Sbjct: 243 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 75/160 (46%), Gaps = 15/160 (9%)
Query: 107 NHRNILKLIGCCIETEIPILVF-EFVEYGTLADRICS-----------PHGPHLEPLLWR 154
+H N++ L+G C + P++V EF ++G L+ + S P + + L
Sbjct: 91 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLE 150
Query: 155 HRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHV 214
H + + ++ M ++ R + +D+ IL E NV K+ DF + I + +V
Sbjct: 151 HLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 207
Query: 215 TSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+++APE I + ++DV+ FG+LL E+ +
Sbjct: 208 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 81/159 (50%), Gaps = 14/159 (8%)
Query: 101 VFAAQMNHRNILKLIGCCIETE-IPILVFEFVEYGTLADRICS-PHGPHLEPLLWRHRLK 158
+ +H N+L L+G C+ +E P++V ++++G L + I + H P ++ L+
Sbjct: 82 IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI-----G 136
Query: 159 IAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHM 218
+++ M Y+ + V +D+ + DE K++DF + + + E + + H
Sbjct: 137 FGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE-YYSVHN 192
Query: 219 LTRTK---RYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
T K +++A E + T K+DV+ FG+LL EL+T
Sbjct: 193 KTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 81/159 (50%), Gaps = 14/159 (8%)
Query: 101 VFAAQMNHRNILKLIGCCIETE-IPILVFEFVEYGTLADRICS-PHGPHLEPLLWRHRLK 158
+ +H N+L L+G C+ +E P++V ++++G L + I + H P ++ L+
Sbjct: 83 IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI-----G 137
Query: 159 IAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHM 218
+++ M Y+ + V +D+ + DE K++DF + + + E + + H
Sbjct: 138 FGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE-YYSVHN 193
Query: 219 LTRTK---RYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
T K +++A E + T K+DV+ FG+LL EL+T
Sbjct: 194 KTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 70/153 (45%), Gaps = 8/153 (5%)
Query: 107 NHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLE-----PLLWRHRLKIAM 161
H NI+ L+G C +++ E+ YG L + + L+ PL R L +
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSS 167
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
++ MA++ + + +D+ +L +VAK+ DF + I ++
Sbjct: 168 QVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 224
Query: 222 TKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+++APE I + ++DV+ +G+LL E+ +
Sbjct: 225 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 81/159 (50%), Gaps = 14/159 (8%)
Query: 101 VFAAQMNHRNILKLIGCCIETE-IPILVFEFVEYGTLADRICS-PHGPHLEPLLWRHRLK 158
+ +H N+L L+G C+ +E P++V ++++G L + I + H P ++ L+
Sbjct: 75 IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI-----G 129
Query: 159 IAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHM 218
+++ M Y+ + V +D+ + DE K++DF + + + E + + H
Sbjct: 130 FGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE-YYSVHN 185
Query: 219 LTRTK---RYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
T K +++A E + T K+DV+ FG+LL EL+T
Sbjct: 186 KTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 224
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 82/203 (40%), Gaps = 34/203 (16%)
Query: 76 NRPISVMKFGDNYSENGENFCFN---NIVFAAQM-------------------NHRNILK 113
RP+ KFG+ Y +N F ++F AQ+ H NIL+
Sbjct: 13 GRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 72
Query: 114 LIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIG 173
L G ++ L+ E+ GT+ + L + E+ NA++Y H
Sbjct: 73 LYGYFHDSTRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCH-- 125
Query: 174 FRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILT 233
+ ++ +DIK +L K++DF S + P L T YL PE I
Sbjct: 126 -SKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAA----LCGTLDYLPPEMIEG 180
Query: 234 GLCNEKTDVFCFGMLLLELLTGR 256
+ +EK D++ G+L E L G+
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 81/159 (50%), Gaps = 14/159 (8%)
Query: 101 VFAAQMNHRNILKLIGCCIETE-IPILVFEFVEYGTLADRICS-PHGPHLEPLLWRHRLK 158
+ +H N+L L+G C+ +E P++V ++++G L + I + H P ++ L+
Sbjct: 81 IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI-----G 135
Query: 159 IAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHM 218
+++ M Y+ + V +D+ + DE K++DF + + + E + + H
Sbjct: 136 FGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE-YYSVHN 191
Query: 219 LTRTK---RYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
T K +++A E + T K+DV+ FG+LL EL+T
Sbjct: 192 KTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 75/154 (48%), Gaps = 10/154 (6%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLE-PLLWRHRLKIAMEI 163
++ H +++L E I +V E++ G L D + G +L P L + +A +I
Sbjct: 69 KLRHEKLVQLYAVVSEEPI-YIVTEYMSKGCLLDFLKGEMGKYLRLPQL----VDMAAQI 123
Query: 164 GNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTK 223
+ MAY+ R V +D++ + IL E V K++DF + I + E +
Sbjct: 124 ASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPI 179
Query: 224 RYLAPEYILTGLCNEKTDVFCFGMLLLELLTGRR 257
++ APE L G K+DV+ FG+LL EL T R
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 81/159 (50%), Gaps = 14/159 (8%)
Query: 101 VFAAQMNHRNILKLIGCCIETE-IPILVFEFVEYGTLADRICS-PHGPHLEPLLWRHRLK 158
+ +H N+L L+G C+ +E P++V ++++G L + I + H P ++ L+
Sbjct: 78 IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI-----G 132
Query: 159 IAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHM 218
+++ M Y+ + V +D+ + DE K++DF + + + E + + H
Sbjct: 133 FGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE-YYSVHN 188
Query: 219 LTRTK---RYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
T K +++A E + T K+DV+ FG+LL EL+T
Sbjct: 189 KTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 227
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 76/154 (49%), Gaps = 10/154 (6%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLE-PLLWRHRLKIAMEI 163
++ H +++L E I +V E++ G+L D + G +L P L + ++ +I
Sbjct: 66 KLRHEKLVQLYAVVSEEPI-YIVTEYMNKGSLLDFLKGETGKYLRLPQL----VDMSAQI 120
Query: 164 GNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTK 223
+ MAY+ R V +D++ + IL E V K++DF + I + E +
Sbjct: 121 ASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPI 176
Query: 224 RYLAPEYILTGLCNEKTDVFCFGMLLLELLTGRR 257
++ APE L G K+DV+ FG+LL EL T R
Sbjct: 177 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 210
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 74/160 (46%), Gaps = 15/160 (9%)
Query: 107 NHRNILKLIGCCIETEIPILVF-EFVEYGTLADRICS-----------PHGPHLEPLLWR 154
+H N++ L+G C + P++V EF ++G L+ + S P + + L
Sbjct: 80 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 139
Query: 155 HRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHV 214
H + + ++ M ++ R + +D+ IL E NV K+ DF + I + V
Sbjct: 140 HLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXV 196
Query: 215 TSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+++APE I + ++DV+ FG+LL E+ +
Sbjct: 197 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 81/159 (50%), Gaps = 14/159 (8%)
Query: 101 VFAAQMNHRNILKLIGCCIETE-IPILVFEFVEYGTLADRICS-PHGPHLEPLLWRHRLK 158
+ +H N+L L+G C+ +E P++V ++++G L + I + H P ++ L+
Sbjct: 101 IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI-----G 155
Query: 159 IAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHM 218
+++ M Y+ + V +D+ + DE K++DF + + + E + + H
Sbjct: 156 FGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE-YYSVHN 211
Query: 219 LTRTK---RYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
T K +++A E + T K+DV+ FG+LL EL+T
Sbjct: 212 KTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 250
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 81/159 (50%), Gaps = 14/159 (8%)
Query: 101 VFAAQMNHRNILKLIGCCIETE-IPILVFEFVEYGTLADRICS-PHGPHLEPLLWRHRLK 158
+ +H N+L L+G C+ +E P++V ++++G L + I + H P ++ L+
Sbjct: 83 IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI-----G 137
Query: 159 IAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHM 218
+++ M Y+ + V +D+ + DE K++DF + + + E + + H
Sbjct: 138 FGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE-YYSVHN 193
Query: 219 LTRTK---RYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
T K +++A E + T K+DV+ FG+LL EL+T
Sbjct: 194 KTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 81/159 (50%), Gaps = 14/159 (8%)
Query: 101 VFAAQMNHRNILKLIGCCIETE-IPILVFEFVEYGTLADRICS-PHGPHLEPLLWRHRLK 158
+ +H N+L L+G C+ +E P++V ++++G L + I + H P ++ L+
Sbjct: 80 IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI-----G 134
Query: 159 IAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHM 218
+++ M Y+ + V +D+ + DE K++DF + + + E + + H
Sbjct: 135 FGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE-YYSVHN 190
Query: 219 LTRTK---RYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
T K +++A E + T K+DV+ FG+LL EL+T
Sbjct: 191 KTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 229
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 74/160 (46%), Gaps = 15/160 (9%)
Query: 107 NHRNILKLIGCCIETEIPILVF-EFVEYGTLADRICS-----------PHGPHLEPLLWR 154
+H N++ L+G C + P++V EF ++G L+ + S P + + L
Sbjct: 80 HHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 139
Query: 155 HRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHV 214
H + + ++ M ++ R + +D+ IL E NV K+ DF + I + V
Sbjct: 140 HLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXV 196
Query: 215 TSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+++APE I + ++DV+ FG+LL E+ +
Sbjct: 197 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 74/169 (43%), Gaps = 22/169 (13%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTL-----ADRICSP--------------HG 145
Q+NH +++KL G C + +L+ E+ +YG+L R P
Sbjct: 82 QVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDH 141
Query: 146 PHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESE 205
P L + A +I M Y+ +V +D+ IL E K+SDF S
Sbjct: 142 PDERALTMGDLISFAWQISQGMQYLA---EMKLVHRDLAARNILVAEGRKMKISDFGLSR 198
Query: 206 YIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+ E +++V +++A E + + ++DV+ FG+LL E++T
Sbjct: 199 DVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 81/159 (50%), Gaps = 14/159 (8%)
Query: 101 VFAAQMNHRNILKLIGCCIETE-IPILVFEFVEYGTLADRICS-PHGPHLEPLLWRHRLK 158
+ +H N+L L+G C+ +E P++V ++++G L + I + H P ++ L+
Sbjct: 102 IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI-----G 156
Query: 159 IAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHM 218
+++ M Y+ + V +D+ + DE K++DF + + + E + + H
Sbjct: 157 FGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE-YYSVHN 212
Query: 219 LTRTK---RYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
T K +++A E + T K+DV+ FG+LL EL+T
Sbjct: 213 KTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 251
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 74/160 (46%), Gaps = 15/160 (9%)
Query: 107 NHRNILKLIGCCIETEIPILVF-EFVEYGTLADRI-----------CSPHGPHLEPLLWR 154
+H N++ L+G C + P++V EF ++G L+ + +P + + L
Sbjct: 89 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 148
Query: 155 HRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHV 214
H + + ++ M ++ R + +D+ IL E NV K+ DF + I + V
Sbjct: 149 HLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXV 205
Query: 215 TSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+++APE I + ++DV+ FG+LL E+ +
Sbjct: 206 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 70/153 (45%), Gaps = 8/153 (5%)
Query: 107 NHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLE-----PLLWRHRLKIAM 161
H NI+ L+G C +++ E+ YG L + + L+ PL R L +
Sbjct: 100 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSS 159
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
++ MA++ + + +D+ +L +VAK+ DF + I ++
Sbjct: 160 QVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 216
Query: 222 TKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+++APE I + ++DV+ +G+LL E+ +
Sbjct: 217 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 80/159 (50%), Gaps = 14/159 (8%)
Query: 101 VFAAQMNHRNILKLIGCCIETE-IPILVFEFVEYGTLADRICS-PHGPHLEPLLWRHRLK 158
+ +H N+L L+G C+ +E P++V ++++G L + I + H P ++ L+
Sbjct: 82 IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI-----G 136
Query: 159 IAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHM 218
+++ M Y+ + V +D+ + DE K++DF + + + E + H
Sbjct: 137 FGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEX-XSVHN 192
Query: 219 LTRTK---RYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
T K +++A E + T K+DV+ FG+LL EL+T
Sbjct: 193 KTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 75/154 (48%), Gaps = 10/154 (6%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLE-PLLWRHRLKIAMEI 163
++ H +++L E I +V E++ G+L D + G +L P L + ++ +I
Sbjct: 66 KLRHEKLVQLYAVVSEEPI-YIVTEYMNKGSLLDFLKGETGKYLRLPQL----VDMSAQI 120
Query: 164 GNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTK 223
+ MAY+ R V +D++ + IL E V K++DF + I + E K
Sbjct: 121 ASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIK 177
Query: 224 RYLAPEYILTGLCNEKTDVFCFGMLLLELLTGRR 257
+ APE L G K+DV+ FG+LL EL T R
Sbjct: 178 -WTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 210
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 80/203 (39%), Gaps = 34/203 (16%)
Query: 76 NRPISVMKFGDNY--SENGENFCFN-NIVFAAQM-------------------NHRNILK 113
RP+ KFG+ Y E F ++F AQ+ H NIL+
Sbjct: 14 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 73
Query: 114 LIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIG 173
L G + L+ E+ GT+ + L + E+ NA++Y H
Sbjct: 74 LYGYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCH-- 126
Query: 174 FRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILT 233
+ ++ +DIK +L K++DF S + P S L YL PE I
Sbjct: 127 -SKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLSGTLD----YLPPEMIEG 181
Query: 234 GLCNEKTDVFCFGMLLLELLTGR 256
+ +EK D++ G+L E L G+
Sbjct: 182 RMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 77/151 (50%), Gaps = 12/151 (7%)
Query: 105 QMNHRNILKLIGCCIETEIPI-LVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEI 163
Q+ H N+++L+G +E + + +V E++ G+L D + S G + L LK ++++
Sbjct: 61 QLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRS-RGRSV--LGGDCLLKFSLDV 117
Query: 164 GNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTK 223
AM Y+ V +D+ +L E NVAK+SDF ++ E T
Sbjct: 118 CEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPV 169
Query: 224 RYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
++ APE + + K+DV+ FG+LL E+ +
Sbjct: 170 KWTAPEALREAAFSTKSDVWSFGILLWEIYS 200
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 100/227 (44%), Gaps = 28/227 (12%)
Query: 104 AQMNHRNILKLIGCCIETEIPI-LVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAME 162
Q+ H N+++L+G +E + + +V E++ G+L D + S G + L LK +++
Sbjct: 241 TQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRS-RGRSV--LGGDCLLKFSLD 297
Query: 163 IGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRT 222
+ AM Y+ V +D+ +L E NVAK+SDF ++ E T
Sbjct: 298 VCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLP 349
Query: 223 KRYLAPEYILTGLCNEKTDVFCFGMLLLELLTGRR---DNILLEHVKKHVENNRLGEIVD 279
++ APE + + K+DV+ FG+LL E+ + R I L+ V VE + D
Sbjct: 350 VKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPD 409
Query: 280 PIVVEDKSCPEKEXXXXXXXXXIFECVNESAGDRPTMVYAAKQLRQM 326
CP + C + A RPT + +QL +
Sbjct: 410 -------GCPP------AVYDVMKNCWHLDAATRPTFLQLREQLEHI 443
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 74/156 (47%), Gaps = 11/156 (7%)
Query: 107 NHRNILKLIGCCIETEIPILVF-EFVEYGTLADRICSPHGPHL-------EPLLWRHRLK 158
+H N++ L+G C + P++V EF ++G L+ + S + + L H +
Sbjct: 89 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIC 148
Query: 159 IAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHM 218
+ ++ M ++ R + +D+ IL E NV K+ DF + I + +V
Sbjct: 149 YSFQVAKGMEFLA---SRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 205
Query: 219 LTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+++APE I + ++DV+ FG+LL E+ +
Sbjct: 206 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 74/160 (46%), Gaps = 15/160 (9%)
Query: 107 NHRNILKLIGCCIETEIPILVF-EFVEYGTLADRI-----------CSPHGPHLEPLLWR 154
+H N++ L+G C + P++V EF ++G L+ + +P + + L
Sbjct: 89 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 148
Query: 155 HRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHV 214
H + + ++ M ++ R + +D+ IL E NV K+ DF + I + V
Sbjct: 149 HLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXV 205
Query: 215 TSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+++APE I + ++DV+ FG+LL E+ +
Sbjct: 206 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 73/169 (43%), Gaps = 22/169 (13%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTL-----ADRICSP--------------HG 145
Q+NH +++KL G C + +L+ E+ +YG+L R P
Sbjct: 82 QVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDH 141
Query: 146 PHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESE 205
P L + A +I M Y+ +V +D+ IL E K+SDF S
Sbjct: 142 PDERALTMGDLISFAWQISQGMQYLA---EMSLVHRDLAARNILVAEGRKMKISDFGLSR 198
Query: 206 YIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+ E ++ V +++A E + + ++DV+ FG+LL E++T
Sbjct: 199 DVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 104/254 (40%), Gaps = 45/254 (17%)
Query: 106 MNHRNILKLIGC-----CIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIA 160
M H NIL+ IG ++ ++ L+ F E G+L+D + + + W IA
Sbjct: 75 MKHENILQFIGAEKRGTSVDVDL-WLITAFHEKGSLSDFLKA------NVVSWNELCHIA 127
Query: 161 MEIGNAMAYIH-------IGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETH 213
+ +AY+H G + I +DIK +L A ++DF + G++
Sbjct: 128 ETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSA 187
Query: 214 VTSHMLTRTKRYLAPEYILTGLCNEKTDVF------CFGMLLLELLT------GRRDNIL 261
+H T+RY+APE +L G N + D F G++L EL + G D +
Sbjct: 188 GDTHGQVGTRRYMAPE-VLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYM 246
Query: 262 L---EHVKKHVENNRLGEIVDPIVVEDKSCP------EKEXXXXXXXXXIFECVNESAGD 312
L E + +H + E +VV K P +K I EC + A
Sbjct: 247 LPFEEEIGQHPSLEDMQE----VVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEA 302
Query: 313 RPTMVYAAKQLRQM 326
R + +++ QM
Sbjct: 303 RLSAGCVGERITQM 316
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 73/162 (45%), Gaps = 22/162 (13%)
Query: 108 HRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHL-----------EPLLWRHR 156
H+NI+ L+G C + ++ E+ G L + + + P L E L +
Sbjct: 85 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 144
Query: 157 LKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTS 216
+ A ++ M Y+ + + +D+ +L E NV K++DF + I H+
Sbjct: 145 VSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDI----HHIDY 197
Query: 217 HMLTRTKR----YLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+ T R ++APE + + ++DV+ FG+LL E+ T
Sbjct: 198 YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 70/159 (44%), Gaps = 14/159 (8%)
Query: 107 NHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLE-----------PLLWRH 155
H NI+ L+G C +++ E+ YG L + + P LE L R
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRD 167
Query: 156 RLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVT 215
L + ++ MA++ + + +D+ +L +VAK+ DF + I ++
Sbjct: 168 LLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 224
Query: 216 SHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+++APE I + ++DV+ +G+LL E+ +
Sbjct: 225 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 73/169 (43%), Gaps = 22/169 (13%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTL-----ADRICSP--------------HG 145
Q+NH +++KL G C + +L+ E+ +YG+L R P
Sbjct: 82 QVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDH 141
Query: 146 PHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESE 205
P L + A +I M Y+ +V +D+ IL E K+SDF S
Sbjct: 142 PDERALTMGDLISFAWQISQGMQYLA---EMKLVHRDLAARNILVAEGRKMKISDFGLSR 198
Query: 206 YIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+ E ++ V +++A E + + ++DV+ FG+LL E++T
Sbjct: 199 DVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 82/193 (42%), Gaps = 23/193 (11%)
Query: 75 ENRPISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYG 134
E + VMK + E + + + H N+LK IG + + + E+++ G
Sbjct: 33 ETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGG 92
Query: 135 TLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYN 194
TL I S + W R+ A +I + MAY+H I+ +D+ L E
Sbjct: 93 TLRGIIKSMDSQYP----WSQRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENK 145
Query: 195 VAKLSDFSESEYI------PEGETHVTSHMLTRTKRY--------LAPEYILTGLCNEKT 240
++DF + + PEG + R KRY +APE I +EK
Sbjct: 146 NVVVADFGLARLMVDEKTQPEGLRSLKKP--DRKKRYTVVGNPYWMAPEMINGRSYDEKV 203
Query: 241 DVFCFGMLLLELL 253
DVF FG++L E++
Sbjct: 204 DVFSFGIVLCEII 216
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 73/162 (45%), Gaps = 22/162 (13%)
Query: 108 HRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHL-----------EPLLWRHR 156
H+NI+ L+G C + ++ E+ G L + + + P L E L +
Sbjct: 82 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 141
Query: 157 LKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTS 216
+ A ++ M Y+ + + +D+ +L E NV K++DF + I H+
Sbjct: 142 VSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDI----HHIDY 194
Query: 217 HMLTRTKR----YLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+ T R ++APE + + ++DV+ FG+LL E+ T
Sbjct: 195 YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 73/162 (45%), Gaps = 22/162 (13%)
Query: 108 HRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHL-----------EPLLWRHR 156
H+NI+ L+G C + ++ E+ G L + + + P L E L +
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 157 LKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTS 216
+ A ++ M Y+ + + +D+ +L E NV K++DF + I H+
Sbjct: 153 VSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDI----HHIDY 205
Query: 217 HMLTRTKR----YLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+ T R ++APE + + ++DV+ FG+LL E+ T
Sbjct: 206 YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 73/162 (45%), Gaps = 22/162 (13%)
Query: 108 HRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHL-----------EPLLWRHR 156
H+NI+ L+G C + ++ E+ G L + + + P L E L +
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 157 LKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTS 216
+ A ++ M Y+ + + +D+ +L E NV K++DF + I H+
Sbjct: 153 VSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDI----HHIDY 205
Query: 217 HMLTRTKR----YLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+ T R ++APE + + ++DV+ FG+LL E+ T
Sbjct: 206 YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 82/180 (45%), Gaps = 29/180 (16%)
Query: 102 FAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAM 161
+AA + RN +K + + + E+ E GTL D I S + WR +
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWR----LFR 123
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFS--------------ESEYI 207
+I A++YIH + I+ +D+K I DE K+ DF +S+ +
Sbjct: 124 QILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 208 PEGETHVTSHMLTRTKRYLAPEYIL-TGLCNEKTDVFCFGMLLLELL----TG-RRDNIL 261
P ++TS + T Y+A E + TG NEK D++ G++ E++ TG R NIL
Sbjct: 181 PGSSDNLTSAI--GTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNIL 238
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 73/162 (45%), Gaps = 22/162 (13%)
Query: 108 HRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHL-----------EPLLWRHR 156
H+NI+ L+G C + ++ E+ G L + + + P L E L +
Sbjct: 134 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 193
Query: 157 LKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTS 216
+ A ++ M Y+ + + +D+ +L E NV K++DF + I H+
Sbjct: 194 VSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDI----HHIDY 246
Query: 217 HMLTRTKR----YLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+ T R ++APE + + ++DV+ FG+LL E+ T
Sbjct: 247 YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 80/203 (39%), Gaps = 34/203 (16%)
Query: 76 NRPISVMKFGDNY--SENGENFCFN-NIVFAAQM-------------------NHRNILK 113
RP+ KFG+ Y E F ++F AQ+ H NIL+
Sbjct: 14 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 73
Query: 114 LIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIG 173
L G + L+ E+ GT+ + L + E+ NA++Y H
Sbjct: 74 LYGYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCH-- 126
Query: 174 FRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILT 233
+ ++ +DIK +L K++DF S + P L T YL PE I
Sbjct: 127 -SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDT----LCGTLDYLPPEMIEG 181
Query: 234 GLCNEKTDVFCFGMLLLELLTGR 256
+ +EK D++ G+L E L G+
Sbjct: 182 RMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 73/162 (45%), Gaps = 22/162 (13%)
Query: 108 HRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHL-----------EPLLWRHR 156
H+NI+ L+G C + ++ E+ G L + + + P L E L +
Sbjct: 86 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 145
Query: 157 LKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTS 216
+ A ++ M Y+ + + +D+ +L E NV K++DF + I H+
Sbjct: 146 VSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDI----HHIDY 198
Query: 217 HMLTRTKR----YLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+ T R ++APE + + ++DV+ FG+LL E+ T
Sbjct: 199 YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 80/203 (39%), Gaps = 34/203 (16%)
Query: 76 NRPISVMKFGDNY--SENGENFCFN-NIVFAAQM-------------------NHRNILK 113
RP+ KFG+ Y E F ++F AQ+ H NIL+
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 75
Query: 114 LIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIG 173
L G + L+ E+ GT+ + L + E+ NA++Y H
Sbjct: 76 LYGYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCH-- 128
Query: 174 FRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILT 233
+ ++ +DIK +L K++DF S + P L T YL PE I
Sbjct: 129 -SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAA----LCGTLDYLPPEMIEG 183
Query: 234 GLCNEKTDVFCFGMLLLELLTGR 256
+ +EK D++ G+L E L G+
Sbjct: 184 RMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 73/162 (45%), Gaps = 22/162 (13%)
Query: 108 HRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHL-----------EPLLWRHR 156
H+NI+ L+G C + ++ E+ G L + + + P L E L +
Sbjct: 78 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 137
Query: 157 LKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTS 216
+ A ++ M Y+ + + +D+ +L E NV K++DF + I H+
Sbjct: 138 VSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDI----HHIDY 190
Query: 217 HMLTRTKR----YLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+ T R ++APE + + ++DV+ FG+LL E+ T
Sbjct: 191 YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 80/203 (39%), Gaps = 34/203 (16%)
Query: 76 NRPISVMKFGDNY--SENGENFCFN-NIVFAAQM-------------------NHRNILK 113
RP+ KFG+ Y E F ++F AQ+ H NIL+
Sbjct: 18 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 77
Query: 114 LIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIG 173
L G + L+ E+ GT+ + L + E+ NA++Y H
Sbjct: 78 LYGYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCH-- 130
Query: 174 FRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILT 233
+ ++ +DIK +L K++DF S + P L T YL PE I
Sbjct: 131 -SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT----LCGTLDYLPPEMIEG 185
Query: 234 GLCNEKTDVFCFGMLLLELLTGR 256
+ +EK D++ G+L E L G+
Sbjct: 186 RMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 80/203 (39%), Gaps = 34/203 (16%)
Query: 76 NRPISVMKFGDNY--SENGENFCFN-NIVFAAQM-------------------NHRNILK 113
RP+ KFG+ Y E F ++F AQ+ H NIL+
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 72
Query: 114 LIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIG 173
L G + L+ E+ GT+ + L + E+ NA++Y H
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCH-- 125
Query: 174 FRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILT 233
+ ++ +DIK +L K++DF S + P L T YL PE I
Sbjct: 126 -SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT----LCGTLDYLPPEMIEG 180
Query: 234 GLCNEKTDVFCFGMLLLELLTGR 256
+ +EK D++ G+L E L G+
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 77/182 (42%), Gaps = 8/182 (4%)
Query: 73 FLENRPISVMKFG--DNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEF 130
L+ P+++ K D C I Q+NH N++K IE +V E
Sbjct: 54 LLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLEL 113
Query: 131 VEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILF 190
+ G L+ R+ + R K +++ +A+ ++H R ++ +DIK + +
Sbjct: 114 ADAGDLS-RMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFI 169
Query: 191 DEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLL 250
V KL D + T +H L T Y++PE I N K+D++ G LL
Sbjct: 170 TATGVVKLGDLGLGRFFSSKTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLY 227
Query: 251 EL 252
E+
Sbjct: 228 EM 229
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 80/203 (39%), Gaps = 34/203 (16%)
Query: 76 NRPISVMKFGDNY--SENGENFCFN-NIVFAAQM-------------------NHRNILK 113
RP+ KFG+ Y E F ++F AQ+ H NIL+
Sbjct: 17 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 76
Query: 114 LIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIG 173
L G + L+ E+ GT+ + L + E+ NA++Y H
Sbjct: 77 LYGYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCH-- 129
Query: 174 FRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILT 233
+ ++ +DIK +L K++DF S + P L T YL PE I
Sbjct: 130 -SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT----LCGTLDYLPPEMIEG 184
Query: 234 GLCNEKTDVFCFGMLLLELLTGR 256
+ +EK D++ G+L E L G+
Sbjct: 185 RMHDEKVDLWSLGVLCYEFLVGK 207
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 83/183 (45%), Gaps = 14/183 (7%)
Query: 76 NRPISVMKFGDNYSENG-ENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYG 134
R +++ KF ++ + + I Q+ H N++ L+ C + + LVFEFV++
Sbjct: 50 GRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHT 109
Query: 135 TLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYN 194
L D P+G L ++ K +I N + + H I+ +DIK IL +
Sbjct: 110 ILDDLELFPNG-----LDYQVVQKYLFQIINGIGFCH---SHNIIHRDIKPENILVSQSG 161
Query: 195 VAKLSDFSESEYIPE-GETHVTSHMLTRTKRYLAPEYILTGL-CNEKTDVFCFGMLLLEL 252
V KL DF + + GE + T+ Y APE ++ + + DV+ G L+ E+
Sbjct: 162 VVKLCDFGFARTLAAPGEVYDDE---VATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEM 218
Query: 253 LTG 255
G
Sbjct: 219 FMG 221
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 73/162 (45%), Gaps = 22/162 (13%)
Query: 108 HRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHL-----------EPLLWRHR 156
H+NI+ L+G C + ++ E+ G L + + + P L E L +
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 152
Query: 157 LKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTS 216
+ A ++ M Y+ + + +D+ +L E NV K++DF + I H+
Sbjct: 153 VSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDI----HHIDY 205
Query: 217 HMLTRTKR----YLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+ T R ++APE + + ++DV+ FG+LL E+ T
Sbjct: 206 YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 80/202 (39%), Gaps = 34/202 (16%)
Query: 77 RPISVMKFGDNY--SENGENFCFN-NIVFAAQMN-------------------HRNILKL 114
RP+ KFG+ Y E F ++F AQ+ H NIL+L
Sbjct: 31 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 90
Query: 115 IGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGF 174
G + L+ E+ GT+ + L + E+ NA++Y H
Sbjct: 91 YGYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCH--- 142
Query: 175 RRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTG 234
+ ++ +DIK +L K++DF S + P L T YL PE I
Sbjct: 143 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT----LCGTLDYLPPEMIEGR 198
Query: 235 LCNEKTDVFCFGMLLLELLTGR 256
+ +EK D++ G+L E L G+
Sbjct: 199 MHDEKVDLWSLGVLCYEFLVGK 220
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 80/203 (39%), Gaps = 34/203 (16%)
Query: 76 NRPISVMKFGDNY--SENGENFCFN-NIVFAAQM-------------------NHRNILK 113
RP+ KFG+ Y E F ++F AQ+ H NIL+
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 75
Query: 114 LIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIG 173
L G + L+ E+ GT+ + L + E+ NA++Y H
Sbjct: 76 LYGYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCH-- 128
Query: 174 FRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILT 233
+ ++ +DIK +L K++DF S + P L T YL PE I
Sbjct: 129 -SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT----LCGTLDYLPPEMIEG 183
Query: 234 GLCNEKTDVFCFGMLLLELLTGR 256
+ +EK D++ G+L E L G+
Sbjct: 184 RMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 80/203 (39%), Gaps = 34/203 (16%)
Query: 76 NRPISVMKFGDNY--SENGENFCFN-NIVFAAQM-------------------NHRNILK 113
RP+ KFG+ Y E F ++F AQ+ H NIL+
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 72
Query: 114 LIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIG 173
L G + L+ E+ GT+ + L + E+ NA++Y H
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCH-- 125
Query: 174 FRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILT 233
+ ++ +DIK +L K++DF S + P L T YL PE I
Sbjct: 126 -SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RXXLCGTLDYLPPEMIEG 180
Query: 234 GLCNEKTDVFCFGMLLLELLTGR 256
+ +EK D++ G+L E L G+
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 80/203 (39%), Gaps = 34/203 (16%)
Query: 76 NRPISVMKFGDNY--SENGENFCFN-NIVFAAQM-------------------NHRNILK 113
RP+ KFG+ Y E F ++F AQ+ H NIL+
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 72
Query: 114 LIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIG 173
L G + L+ E+ GT+ + L + E+ NA++Y H
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCH-- 125
Query: 174 FRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILT 233
+ ++ +DIK +L K++DF S + P L T YL PE I
Sbjct: 126 -SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAA----LCGTLDYLPPEMIEG 180
Query: 234 GLCNEKTDVFCFGMLLLELLTGR 256
+ +EK D++ G+L E L G+
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 98/212 (46%), Gaps = 31/212 (14%)
Query: 47 GELKIATNNYNGHQVIASEHYKLYKGFLENRPISVMKFGDNYSENGENFCFNNIVFAAQM 106
GE+ +AT YN H +A + MK G S + E F V +
Sbjct: 202 GEVWMAT--YNKHTKVA---------------VKTMKPG---SMSVEAFLAEANVMKT-L 240
Query: 107 NHRNILKLIGCCIETEIPI-LVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGN 165
H ++KL + T+ PI ++ EF+ G+L D + S G +PL + + +I
Sbjct: 241 QHDKLVKL--HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSK-QPL--PKLIDFSAQIAE 295
Query: 166 AMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRY 225
MA+I +R + +D++ + IL V K++DF + I + E + ++
Sbjct: 296 GMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNE-YTAREGAKFPIKW 351
Query: 226 LAPEYILTGLCNEKTDVFCFGMLLLELLTGRR 257
APE I G K+DV+ FG+LL+E++T R
Sbjct: 352 TAPEAINFGSFTIKSDVWSFGILLMEIVTYGR 383
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 80/203 (39%), Gaps = 34/203 (16%)
Query: 76 NRPISVMKFGDNY--SENGENFCFN-NIVFAAQM-------------------NHRNILK 113
RP+ KFG+ Y E F ++F AQ+ H NIL+
Sbjct: 15 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 74
Query: 114 LIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIG 173
L G + L+ E+ GT+ + L + E+ NA++Y H
Sbjct: 75 LYGYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCH-- 127
Query: 174 FRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILT 233
+ ++ +DIK +L K++DF S + P L T YL PE I
Sbjct: 128 -SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RXXLCGTLDYLPPEMIEG 182
Query: 234 GLCNEKTDVFCFGMLLLELLTGR 256
+ +EK D++ G+L E L G+
Sbjct: 183 RMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 80/203 (39%), Gaps = 34/203 (16%)
Query: 76 NRPISVMKFGDNY--SENGENFCFN-NIVFAAQM-------------------NHRNILK 113
RP+ KFG+ Y E F ++F AQ+ H NIL+
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 75
Query: 114 LIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIG 173
L G + L+ E+ GT+ + L + E+ NA++Y H
Sbjct: 76 LYGYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCH-- 128
Query: 174 FRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILT 233
+ ++ +DIK +L K++DF S + P L T YL PE I
Sbjct: 129 -SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RXXLCGTLDYLPPEMIEG 183
Query: 234 GLCNEKTDVFCFGMLLLELLTGR 256
+ +EK D++ G+L E L G+
Sbjct: 184 RMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 95/211 (45%), Gaps = 29/211 (13%)
Query: 47 GELKIATNNYNGHQVIASEHYKLYKGFLENRPISVMKFGDNYSENGENFCFNNIVFAAQM 106
GE+ +AT YN H +A + MK G S + E F V +
Sbjct: 29 GEVWMAT--YNKHTKVA---------------VKTMKPG---SMSVEAFLAEANVMKT-L 67
Query: 107 NHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNA 166
H ++KL + I I+ EF+ G+L D + S G +PL + + +I
Sbjct: 68 QHDKLVKLHAVVTKEPIYIIT-EFMAKGSLLDFLKSDEGSK-QPL--PKLIDFSAQIAEG 123
Query: 167 MAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYL 226
MA+I +R + +D++ + IL V K++DF + I + E + ++
Sbjct: 124 MAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNE-YTAREGAKFPIKWT 179
Query: 227 APEYILTGLCNEKTDVFCFGMLLLELLTGRR 257
APE I G K+DV+ FG+LL+E++T R
Sbjct: 180 APEAINFGSFTIKSDVWSFGILLMEIVTYGR 210
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 77/151 (50%), Gaps = 12/151 (7%)
Query: 105 QMNHRNILKLIGCCIETEIPI-LVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEI 163
Q+ H N+++L+G +E + + +V E++ G+L D + S G + L LK ++++
Sbjct: 70 QLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRS-RGRSV--LGGDCLLKFSLDV 126
Query: 164 GNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTK 223
AM Y+ V +D+ +L E NVAK+SDF ++ E T
Sbjct: 127 CEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPV 178
Query: 224 RYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
++ APE + + K+DV+ FG+LL E+ +
Sbjct: 179 KWTAPEALREKKFSTKSDVWSFGILLWEIYS 209
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 80/203 (39%), Gaps = 34/203 (16%)
Query: 76 NRPISVMKFGDNY--SENGENFCFN-NIVFAAQM-------------------NHRNILK 113
RP+ KFG+ Y E F ++F AQ+ H NIL+
Sbjct: 12 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 71
Query: 114 LIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIG 173
L G + L+ E+ GT+ + L + E+ NA++Y H
Sbjct: 72 LYGYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCH-- 124
Query: 174 FRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILT 233
+ ++ +DIK +L K++DF S + P L T YL PE I
Sbjct: 125 -SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT----LCGTLDYLPPEMIEG 179
Query: 234 GLCNEKTDVFCFGMLLLELLTGR 256
+ +EK D++ G+L E L G+
Sbjct: 180 RMHDEKVDLWSLGVLCYEFLVGK 202
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 80/202 (39%), Gaps = 34/202 (16%)
Query: 77 RPISVMKFGDNY--SENGENFCFN-NIVFAAQM-------------------NHRNILKL 114
RP+ KFG+ Y E F ++F AQ+ H NIL+L
Sbjct: 40 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 99
Query: 115 IGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGF 174
G + L+ E+ GT+ + L + E+ NA++Y H
Sbjct: 100 YGYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCH--- 151
Query: 175 RRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTG 234
+ ++ +DIK +L K++DF S + P L T YL PE I
Sbjct: 152 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT----LCGTLDYLPPEMIEGR 207
Query: 235 LCNEKTDVFCFGMLLLELLTGR 256
+ +EK D++ G+L E L G+
Sbjct: 208 MHDEKVDLWSLGVLCYEFLVGK 229
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 80/203 (39%), Gaps = 34/203 (16%)
Query: 76 NRPISVMKFGDNY--SENGENFCFN-NIVFAAQM-------------------NHRNILK 113
RP+ KFG+ Y E F ++F AQ+ H NIL+
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 75
Query: 114 LIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIG 173
L G + L+ E+ GT+ + L + E+ NA++Y H
Sbjct: 76 LYGYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCH-- 128
Query: 174 FRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILT 233
+ ++ +DIK +L K++DF S + P L T YL PE I
Sbjct: 129 -SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT----LCGTLDYLPPEMIEG 183
Query: 234 GLCNEKTDVFCFGMLLLELLTGR 256
+ +EK D++ G+L E L G+
Sbjct: 184 RMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 72/161 (44%), Gaps = 16/161 (9%)
Query: 106 MNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLL------------W 153
+ H +I+K G C + + I+VFE++++G L ++ HGP L+
Sbjct: 74 LQHEHIVKFYGVCGDGDPLIMVFEYMKHGDL-NKFLRAHGPDAMILVDGQPRQAKGELGL 132
Query: 154 RHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETH 213
L IA +I + M Y+ + V +D+ L + K+ DF S + + +
Sbjct: 133 SQMLHIASQIASGMVYLA---SQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYY 189
Query: 214 VTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
R++ PE I+ ++DV+ FG++L E+ T
Sbjct: 190 RVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 80/203 (39%), Gaps = 34/203 (16%)
Query: 76 NRPISVMKFGDNY--SENGENFCFN-NIVFAAQM-------------------NHRNILK 113
RP+ KFG+ Y E F ++F AQ+ H NIL+
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 72
Query: 114 LIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIG 173
L G + L+ E+ GT+ + L + E+ NA++Y H
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCH-- 125
Query: 174 FRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILT 233
+ ++ +DIK +L K++DF S + P L T YL PE I
Sbjct: 126 -SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTXLCGTLDYLPPEMIEG 180
Query: 234 GLCNEKTDVFCFGMLLLELLTGR 256
+ +EK D++ G+L E L G+
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 80/203 (39%), Gaps = 34/203 (16%)
Query: 76 NRPISVMKFGDNY--SENGENFCFN-NIVFAAQM-------------------NHRNILK 113
RP+ KFG+ Y E F ++F AQ+ H NIL+
Sbjct: 10 GRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 69
Query: 114 LIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIG 173
L G + L+ E+ GT+ + L + E+ NA++Y H
Sbjct: 70 LYGYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCH-- 122
Query: 174 FRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILT 233
+ ++ +DIK +L K++DF S + P L T YL PE I
Sbjct: 123 -SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT----LCGTLDYLPPEMIEG 177
Query: 234 GLCNEKTDVFCFGMLLLELLTGR 256
+ +EK D++ G+L E L G+
Sbjct: 178 RMHDEKVDLWSLGVLCYEFLVGK 200
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 72/162 (44%), Gaps = 22/162 (13%)
Query: 108 HRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHL-----------EPLLWRHR 156
H+NI+ L+G C + ++ E+ G L + + + P L E L +
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDL 152
Query: 157 LKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTS 216
+ A ++ M Y+ + + +D+ +L E NV K++DF + I H+
Sbjct: 153 VSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDI----HHIDX 205
Query: 217 HMLTRTKR----YLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
T R ++APE + + ++DV+ FG+LL E+ T
Sbjct: 206 XKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 85/221 (38%), Gaps = 35/221 (15%)
Query: 58 GHQVIASEHYKLYKGFLENRPISVMKFGDNY--SENGENFCFN-NIVFAAQM-------- 106
GH + L + F RP+ KFG+ Y E F ++F AQ+
Sbjct: 1 GHXESKKRQWAL-EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ 59
Query: 107 -----------NHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRH 155
H NIL+L G + L+ E+ GT+ + L +
Sbjct: 60 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQR 114
Query: 156 RLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVT 215
E+ NA++Y H + ++ +DIK +L K++DF S + P
Sbjct: 115 TATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT- 170
Query: 216 SHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTGR 256
L T YL PE I +EK D++ G+L E L G+
Sbjct: 171 ---LCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 78/154 (50%), Gaps = 12/154 (7%)
Query: 105 QMNHRNILKLIGCCIETEIPI-LVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEI 163
Q+ H N+++L+G +E + + +V E++ G+L D + S G + L LK ++++
Sbjct: 55 QLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRS-RGRSV--LGGDCLLKFSLDV 111
Query: 164 GNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTK 223
AM Y+ V +D+ +L E NVAK+SDF ++ E T
Sbjct: 112 CEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPV 163
Query: 224 RYLAPEYILTGLCNEKTDVFCFGMLLLELLTGRR 257
++ APE + + K+DV+ FG+LL E+ + R
Sbjct: 164 KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGR 197
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 80/159 (50%), Gaps = 14/159 (8%)
Query: 101 VFAAQMNHRNILKLIGCCIETE-IPILVFEFVEYGTLADRICS-PHGPHLEPLLWRHRLK 158
+ +H N+L L+G C+ +E P++V ++++G L + I + H P ++ L+
Sbjct: 83 IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI-----G 137
Query: 159 IAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHM 218
+++ M ++ + V +D+ + DE K++DF + + + E + H
Sbjct: 138 FGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFD-SVHN 193
Query: 219 LTRTK---RYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
T K +++A E + T K+DV+ FG+LL EL+T
Sbjct: 194 KTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 80/159 (50%), Gaps = 14/159 (8%)
Query: 101 VFAAQMNHRNILKLIGCCIETE-IPILVFEFVEYGTLADRICS-PHGPHLEPLLWRHRLK 158
+ +H N+L L+G C+ +E P++V ++++G L + I + H P ++ L+
Sbjct: 84 IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI-----G 138
Query: 159 IAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHM 218
+++ M ++ + V +D+ + DE K++DF + + + E + H
Sbjct: 139 FGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFD-SVHN 194
Query: 219 LTRTK---RYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
T K +++A E + T K+DV+ FG+LL EL+T
Sbjct: 195 KTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 80/159 (50%), Gaps = 14/159 (8%)
Query: 101 VFAAQMNHRNILKLIGCCIETE-IPILVFEFVEYGTLADRICS-PHGPHLEPLLWRHRLK 158
+ +H N+L L+G C+ +E P++V ++++G L + I + H P ++ L+
Sbjct: 84 IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI-----G 138
Query: 159 IAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHM 218
+++ M ++ + V +D+ + DE K++DF + + + E + H
Sbjct: 139 FGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFD-SVHN 194
Query: 219 LTRTK---RYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
T K +++A E + T K+DV+ FG+LL EL+T
Sbjct: 195 KTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 80/203 (39%), Gaps = 34/203 (16%)
Query: 76 NRPISVMKFGDNY--SENGENFCFN-NIVFAAQM-------------------NHRNILK 113
RP+ KFG+ Y E F ++F AQ+ H NIL+
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 72
Query: 114 LIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIG 173
L G + L+ E+ GT+ + L + E+ NA++Y H
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCH-- 125
Query: 174 FRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILT 233
+ ++ +DIK +L K++DF S + P L T YL PE I
Sbjct: 126 -SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTELCGTLDYLPPEMIEG 180
Query: 234 GLCNEKTDVFCFGMLLLELLTGR 256
+ +EK D++ G+L E L G+
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 80/159 (50%), Gaps = 14/159 (8%)
Query: 101 VFAAQMNHRNILKLIGCCIETE-IPILVFEFVEYGTLADRICS-PHGPHLEPLLWRHRLK 158
+ +H N+L L+G C+ +E P++V ++++G L + I + H P ++ L+
Sbjct: 81 IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI-----G 135
Query: 159 IAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHM 218
+++ M ++ + V +D+ + DE K++DF + + + E + H
Sbjct: 136 FGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFD-SVHN 191
Query: 219 LTRTK---RYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
T K +++A E + T K+DV+ FG+LL EL+T
Sbjct: 192 KTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 80/159 (50%), Gaps = 14/159 (8%)
Query: 101 VFAAQMNHRNILKLIGCCIETE-IPILVFEFVEYGTLADRICS-PHGPHLEPLLWRHRLK 158
+ +H N+L L+G C+ +E P++V ++++G L + I + H P ++ L+
Sbjct: 83 IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI-----G 137
Query: 159 IAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHM 218
+++ M ++ + V +D+ + DE K++DF + + + E + H
Sbjct: 138 FGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFD-SVHN 193
Query: 219 LTRTK---RYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
T K +++A E + T K+DV+ FG+LL EL+T
Sbjct: 194 KTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 12/152 (7%)
Query: 106 MNHRNILKLIGCCIETEIPIL--VFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEI 163
+ H +I+K GCC + L V E+V G+L D + H L LL A +I
Sbjct: 90 LYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPR-HSIGLAQLLL-----FAQQI 143
Query: 164 GNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEG-ETHVTSHMLTRT 222
MAY+H + + +D+ +L D + K+ DF ++ +PEG E +
Sbjct: 144 CEGMAYLHA---QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSP 200
Query: 223 KRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+ APE + +DV+ FG+ L ELLT
Sbjct: 201 VFWYAPECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 80/159 (50%), Gaps = 14/159 (8%)
Query: 101 VFAAQMNHRNILKLIGCCIETE-IPILVFEFVEYGTLADRICS-PHGPHLEPLLWRHRLK 158
+ +H N+L L+G C+ +E P++V ++++G L + I + H P ++ L+
Sbjct: 88 IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI-----G 142
Query: 159 IAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHM 218
+++ M ++ + V +D+ + DE K++DF + + + E + H
Sbjct: 143 FGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFD-SVHN 198
Query: 219 LTRTK---RYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
T K +++A E + T K+DV+ FG+LL EL+T
Sbjct: 199 KTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 237
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 80/202 (39%), Gaps = 34/202 (16%)
Query: 77 RPISVMKFGDNY--SENGENFCFN-NIVFAAQMN-------------------HRNILKL 114
RP+ KFG+ Y E F ++F AQ+ H NIL+L
Sbjct: 40 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 99
Query: 115 IGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGF 174
G + L+ E+ GT+ + L + E+ NA++Y H
Sbjct: 100 YGYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCH--- 151
Query: 175 RRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTG 234
+ ++ +DIK +L K++DF S + P L T YL PE I
Sbjct: 152 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDD----LCGTLDYLPPEMIEGR 207
Query: 235 LCNEKTDVFCFGMLLLELLTGR 256
+ +EK D++ G+L E L G+
Sbjct: 208 MHDEKVDLWSLGVLCYEFLVGK 229
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 80/203 (39%), Gaps = 34/203 (16%)
Query: 76 NRPISVMKFGDNY--SENGENFCFN-NIVFAAQM-------------------NHRNILK 113
RP+ KFG+ Y E F ++F AQ+ H NIL+
Sbjct: 18 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 77
Query: 114 LIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIG 173
L G + L+ E+ GT+ + L + E+ NA++Y H
Sbjct: 78 LYGYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCH-- 130
Query: 174 FRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILT 233
+ ++ +DIK +L K++DF S + P L T YL PE I
Sbjct: 131 -SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTDLCGTLDYLPPEMIEG 185
Query: 234 GLCNEKTDVFCFGMLLLELLTGR 256
+ +EK D++ G+L E L G+
Sbjct: 186 RMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 80/159 (50%), Gaps = 14/159 (8%)
Query: 101 VFAAQMNHRNILKLIGCCIETE-IPILVFEFVEYGTLADRICS-PHGPHLEPLLWRHRLK 158
+ +H N+L L+G C+ +E P++V ++++G L + I + H P ++ L+
Sbjct: 142 IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI-----G 196
Query: 159 IAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHM 218
+++ M ++ + V +D+ + DE K++DF + + + E + H
Sbjct: 197 FGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFD-SVHN 252
Query: 219 LTRTK---RYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
T K +++A E + T K+DV+ FG+LL EL+T
Sbjct: 253 KTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 291
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 80/203 (39%), Gaps = 34/203 (16%)
Query: 76 NRPISVMKFGDNY--SENGENFCFN-NIVFAAQM-------------------NHRNILK 113
RP+ KFG+ Y E F ++F AQ+ H NIL+
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 75
Query: 114 LIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIG 173
L G + L+ E+ GT+ + L + E+ NA++Y H
Sbjct: 76 LYGYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCH-- 128
Query: 174 FRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILT 233
+ ++ +DIK +L K++DF S + P L T YL PE I
Sbjct: 129 -SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RDDLCGTLDYLPPEMIEG 183
Query: 234 GLCNEKTDVFCFGMLLLELLTGR 256
+ +EK D++ G+L E L G+
Sbjct: 184 RMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 75/153 (49%), Gaps = 12/153 (7%)
Query: 106 MNHRNILKLIGCCIETE-IPILVFEFVEYGTLADRICSPH-GPHLEPLLWRHRLKIAMEI 163
+NH N+L LIG + E +P ++ ++ +G L I SP P ++ L+ +++
Sbjct: 79 LNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLI-----SFGLQV 133
Query: 164 GNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETH-VTSHMLTRT 222
M Y+ + V +D+ + DE K++DF + I + E + V H R
Sbjct: 134 ARGMEYLA---EQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARL 190
Query: 223 K-RYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
++ A E + T K+DV+ FG+LL ELLT
Sbjct: 191 PVKWTALESLQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 80/203 (39%), Gaps = 34/203 (16%)
Query: 76 NRPISVMKFGDNY--SENGENFCFN-NIVFAAQM-------------------NHRNILK 113
RP+ KFG+ Y E F ++F AQ+ H NIL+
Sbjct: 14 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 73
Query: 114 LIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIG 173
L G + L+ E+ GT+ + L + E+ NA++Y H
Sbjct: 74 LYGYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCH-- 126
Query: 174 FRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILT 233
+ ++ +DIK +L K++DF S + P L T YL PE I
Sbjct: 127 -SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTDLCGTLDYLPPEMIEG 181
Query: 234 GLCNEKTDVFCFGMLLLELLTGR 256
+ +EK D++ G+L E L G+
Sbjct: 182 RMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 80/203 (39%), Gaps = 34/203 (16%)
Query: 76 NRPISVMKFGDNY--SENGENFCFN-NIVFAAQM-------------------NHRNILK 113
RP+ KFG+ Y E F ++F AQ+ H NIL+
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 72
Query: 114 LIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIG 173
L G + L+ E+ GT+ + L + E+ NA++Y H
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCH-- 125
Query: 174 FRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILT 233
+ ++ +DIK +L K++DF S + P L T YL PE I
Sbjct: 126 -SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTDLCGTLDYLPPEMIEG 180
Query: 234 GLCNEKTDVFCFGMLLLELLTGR 256
+ +EK D++ G+L E L G+
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 80/203 (39%), Gaps = 34/203 (16%)
Query: 76 NRPISVMKFGDNY--SENGENFCFN-NIVFAAQM-------------------NHRNILK 113
RP+ KFG+ Y E F ++F AQ+ H NIL+
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 72
Query: 114 LIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIG 173
L G + L+ E+ GT+ + L + E+ NA++Y H
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCH-- 125
Query: 174 FRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILT 233
+ ++ +DIK +L K++DF S + P L T YL PE I
Sbjct: 126 -SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTDLCGTLDYLPPEMIEG 180
Query: 234 GLCNEKTDVFCFGMLLLELLTGR 256
+ +EK D++ G+L E L G+
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 72/166 (43%), Gaps = 21/166 (12%)
Query: 107 NHRNILKLIGCCIETEIPILVFEFVEYGTLAD----RICSPHGPHL-------------- 148
H NI+ L+G C +++ E+ YG L + + + GP L
Sbjct: 93 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDG 152
Query: 149 EPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIP 208
PL R L + ++ MA++ + + +D+ +L +VAK+ DF + I
Sbjct: 153 RPLELRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIM 209
Query: 209 EGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
++ +++APE I + ++DV+ +G+LL E+ +
Sbjct: 210 NDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 79/203 (38%), Gaps = 34/203 (16%)
Query: 76 NRPISVMKFGDNY--SENGENFCFN-NIVFAAQM-------------------NHRNILK 113
RP+ KFG+ Y E F ++F AQ+ H NIL+
Sbjct: 18 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 77
Query: 114 LIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIG 173
L G + L+ E+ G + + L + E+ NA++Y H
Sbjct: 78 LYGYFHDATRVYLILEYAPRGEVYKELQK-----LSKFDEQRTATYITELANALSYCH-- 130
Query: 174 FRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILT 233
+ ++ +DIK +L K++DF S + P L T YL PE I
Sbjct: 131 -SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RXXLXGTLDYLPPEMIEG 185
Query: 234 GLCNEKTDVFCFGMLLLELLTGR 256
+ +EK D++ G+L E L G+
Sbjct: 186 RMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 70/166 (42%), Gaps = 21/166 (12%)
Query: 107 NHRNILKLIGCCIETEIPILVFEFVEYGTL------------ADRICSPHGPHLEP---- 150
+H NI+ L+G C + L+FE+ YG L D I + LE
Sbjct: 107 SHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDL 166
Query: 151 --LLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIP 208
L + L A ++ M ++ + V +D+ +L V K+ DF + I
Sbjct: 167 NVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARDIM 223
Query: 209 EGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+V +++APE + G+ K+DV+ +G+LL E+ +
Sbjct: 224 SDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 79/203 (38%), Gaps = 34/203 (16%)
Query: 76 NRPISVMKFGDNY--SENGENFCFN-NIVFAAQM-------------------NHRNILK 113
RP+ KFG+ Y E F ++F AQ+ H NIL+
Sbjct: 18 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 77
Query: 114 LIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIG 173
L G + L+ E+ G + + L + E+ NA++Y H
Sbjct: 78 LYGYFHDATRVYLILEYAPRGEVYKELQK-----LSKFDEQRTATYITELANALSYCH-- 130
Query: 174 FRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILT 233
+ ++ +DIK +L K++DF S + P L T YL PE I
Sbjct: 131 -SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT----LCGTLDYLPPEMIEG 185
Query: 234 GLCNEKTDVFCFGMLLLELLTGR 256
+ +EK D++ G+L E L G+
Sbjct: 186 RMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 80/203 (39%), Gaps = 34/203 (16%)
Query: 76 NRPISVMKFGDNY--SENGENFCFN-NIVFAAQM-------------------NHRNILK 113
RP+ KFG+ Y E F ++F AQ+ H NIL+
Sbjct: 15 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 74
Query: 114 LIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIG 173
L G + L+ E+ GT+ + L + E+ NA++Y H
Sbjct: 75 LYGYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCH-- 127
Query: 174 FRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILT 233
+ ++ +DIK +L K+++F S + P L T YL PE I
Sbjct: 128 -SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTT----LCGTLDYLPPEMIEG 182
Query: 234 GLCNEKTDVFCFGMLLLELLTGR 256
+ +EK D++ G+L E L G+
Sbjct: 183 RMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 73/149 (48%), Gaps = 12/149 (8%)
Query: 108 HRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAM 167
H +I+KL +V E+V G L D IC HG +E + R ++ +I +A+
Sbjct: 70 HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICK-HG-RVEEMEAR---RLFQQILSAV 124
Query: 168 AYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLA 227
Y H R +V +D+K +L D + AK++DF S + +GE TS + Y A
Sbjct: 125 DYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTS---CGSPNYAA 178
Query: 228 PEYILTGL-CNEKTDVFCFGMLLLELLTG 255
PE I L + D++ G++L LL G
Sbjct: 179 PEVISGRLYAGPEVDIWSCGVILYALLCG 207
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 80/203 (39%), Gaps = 34/203 (16%)
Query: 76 NRPISVMKFGDNY--SENGENFCFN-NIVFAAQM-------------------NHRNILK 113
RP+ KFG+ Y E F ++F AQ+ H NIL+
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 75
Query: 114 LIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIG 173
L G + L+ E+ GT+ + L + E+ NA++Y H
Sbjct: 76 LYGYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCH-- 128
Query: 174 FRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILT 233
+ ++ +DIK +L K+++F S + P L T YL PE I
Sbjct: 129 -SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTT----LCGTLDYLPPEMIEG 183
Query: 234 GLCNEKTDVFCFGMLLLELLTGR 256
+ +EK D++ G+L E L G+
Sbjct: 184 RMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 74/154 (48%), Gaps = 10/154 (6%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLE-PLLWRHRLKIAMEI 163
++ H +++L E I I V E++ G+L D + G L+ P L + +A ++
Sbjct: 60 KLKHDKLVQLYAVVSEEPIYI-VTEYMNKGSLLDFLKDGEGRALKLPNL----VDMAAQV 114
Query: 164 GNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTK 223
MAYI R + +D++ + IL + K++DF + I + E K
Sbjct: 115 AAGMAYIE---RMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIK 171
Query: 224 RYLAPEYILTGLCNEKTDVFCFGMLLLELLTGRR 257
+ APE L G K+DV+ FG+LL EL+T R
Sbjct: 172 -WTAPEAALYGRFTIKSDVWSFGILLTELVTKGR 204
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 81/184 (44%), Gaps = 14/184 (7%)
Query: 79 ISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEI-----PILVFEFVEY 133
+ MK ++ E F + +H N+++L+G CIE P+++ F++Y
Sbjct: 67 VKTMKLDNSSQREIEEF-LSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKY 125
Query: 134 GTLADRICSPH---GPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILF 190
G L + GP PL + LK ++I M Y+ R + +D+ +
Sbjct: 126 GDLHTYLLYSRLETGPKHIPL--QTLLKFMVDIALGMEYLS---NRNFLHRDLAARNCML 180
Query: 191 DEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLL 250
+ ++DF S+ I G+ + + +++A E + + K+DV+ FG+ +
Sbjct: 181 RDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMW 240
Query: 251 ELLT 254
E+ T
Sbjct: 241 EIAT 244
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 78/163 (47%), Gaps = 10/163 (6%)
Query: 93 ENFCFNNIVFAAQMNHRNILKLIGCCIETEIPI-LVFEFVEYGTLADRICSPHGPHLEPL 151
E+ F +++H ++K G C E PI +V E++ G L + + S HG LEP
Sbjct: 47 EDEFFQEAQTMMKLSHPKLVKFYGVC-SKEYPIYIVTEYISNGCLLNYLRS-HGKGLEP- 103
Query: 152 LWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGE 211
L++ ++ MA++ + +D+ L D K+SDF + Y+ + +
Sbjct: 104 --SQLLEMCYDVCEGMAFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLD-D 157
Query: 212 THVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+V+S ++ APE + K+DV+ FG+L+ E+ +
Sbjct: 158 QYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFS 200
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 72/163 (44%), Gaps = 8/163 (4%)
Query: 97 FNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLAD-----RICSPHGPHLEPL 151
N + N ++++L+G + + +++ E + G L R + P L P
Sbjct: 66 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPP 125
Query: 152 LWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGE 211
+++A EI + MAY++ V +D+ + E K+ DF + I E +
Sbjct: 126 SLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 182
Query: 212 THVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+ R+++PE + G+ +DV+ FG++L E+ T
Sbjct: 183 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 98/240 (40%), Gaps = 42/240 (17%)
Query: 69 LYKGFLENRPISVMKF--GDNYSENGENFCFNNIVFAAQMNHRNILKLI-----GCCIET 121
++K L N ++V F D S E F+ M H N+L+ I G +E
Sbjct: 31 VWKAQLMNDFVAVKIFPLQDKQSWQSEREIFST----PGMKHENLLQFIAAEKRGSNLEV 86
Query: 122 EIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHI--------G 173
E+ L+ F + G+L D + + W +A + ++Y+H G
Sbjct: 87 EL-WLITAFHDKGSLTDYLKG------NIITWNELCHVAETMSRGLSYLHEDVPWCRGEG 139
Query: 174 FRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILT 233
+ I +D K +L A L+DF + G+ +H T+RY+APE +L
Sbjct: 140 HKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPE-VLE 198
Query: 234 GLCNEKTDVF------CFGMLLLELLT------GRRDNILL---EHVKKHVENNRLGEIV 278
G N + D F G++L EL++ G D +L E + +H L E+V
Sbjct: 199 GAINFQRDAFLRIDMYAMGLVLWELVSRCKAADGPVDEYMLPFEEEIGQHPSLEELQEVV 258
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 81/180 (45%), Gaps = 29/180 (16%)
Query: 102 FAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAM 161
+AA + RN +K + + + E+ E TL D I S + WR +
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWR----LFR 123
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFS--------------ESEYI 207
+I A++YIH + I+ +D+K I DE K+ DF +S+ +
Sbjct: 124 QILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 208 PEGETHVTSHMLTRTKRYLAPEYIL-TGLCNEKTDVFCFGMLLLELL----TG-RRDNIL 261
P ++TS + T Y+A E + TG NEK D++ G++ E++ TG R NIL
Sbjct: 181 PGSSDNLTSAI--GTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNIL 238
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 96/221 (43%), Gaps = 17/221 (7%)
Query: 98 NNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRL 157
N + + H NIL +G + ++ I V ++ E +L + H + + + +
Sbjct: 57 NEVGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHL---HASETKFEM-KKLI 111
Query: 158 KIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSH 217
IA + M Y+H + I+ +D+K + I E N K+ DF +
Sbjct: 112 DIARQTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFE 168
Query: 218 MLTRTKRYLAPEYILTGLCNE---KTDVFCFGMLLLELLTGRRDNILLEHVKKHVENNRL 274
L+ + ++APE I N ++DV+ FG++L EL+TG+ + + + +E
Sbjct: 169 QLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGR 228
Query: 275 GEIVDPIVVEDKSCPEKEXXXXXXXXXIFECVNESAGDRPT 315
G + + +CP++ + EC+ + +RP+
Sbjct: 229 GSLSPDLSKVRSNCPKR------MKRLMAECLKKKRDERPS 263
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 65/152 (42%), Gaps = 12/152 (7%)
Query: 104 AQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEI 163
+ + H NIL+L G + L+ E+ GT+ + L + E+
Sbjct: 67 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK-----LSRFDEQRTATYITEL 121
Query: 164 GNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTK 223
NA++Y H + ++ +DIK +L K++DF S + P L T
Sbjct: 122 ANALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDT----LCGTL 174
Query: 224 RYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
YL PE I + +EK D++ G+L E L G
Sbjct: 175 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 72/163 (44%), Gaps = 8/163 (4%)
Query: 97 FNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLAD-----RICSPHGPHLEPL 151
N + N ++++L+G + + +++ E + G L R + P L P
Sbjct: 76 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPP 135
Query: 152 LWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGE 211
+++A EI + MAY++ V +D+ + E K+ DF + I E +
Sbjct: 136 SLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 192
Query: 212 THVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+ R+++PE + G+ +DV+ FG++L E+ T
Sbjct: 193 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 72/158 (45%), Gaps = 14/158 (8%)
Query: 108 HRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHL-----------EPLLWRHR 156
H+NI+ L+G C + ++ E+ G L + + + P + E + ++
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 157 LKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTS 216
+ ++ M Y+ + + +D+ +L E NV K++DF + I + + +
Sbjct: 160 VSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNT 216
Query: 217 HMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+++APE + + ++DV+ FG+L+ E+ T
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 96/221 (43%), Gaps = 17/221 (7%)
Query: 98 NNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRL 157
N + + H NIL +G + ++ I V ++ E +L + H + + + +
Sbjct: 69 NEVGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHL---HASETKFEM-KKLI 123
Query: 158 KIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSH 217
IA + M Y+H + I+ +D+K + I E N K+ DF +
Sbjct: 124 DIARQTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFE 180
Query: 218 MLTRTKRYLAPEYILTGLCNE---KTDVFCFGMLLLELLTGRRDNILLEHVKKHVENNRL 274
L+ + ++APE I N ++DV+ FG++L EL+TG+ + + + +E
Sbjct: 181 QLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGR 240
Query: 275 GEIVDPIVVEDKSCPEKEXXXXXXXXXIFECVNESAGDRPT 315
G + + +CP++ + EC+ + +RP+
Sbjct: 241 GSLSPDLSKVRSNCPKR------MKRLMAECLKKKRDERPS 275
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 66/157 (42%), Gaps = 12/157 (7%)
Query: 101 VFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIA 160
VF NH ++ L C V E+V G L H L H +
Sbjct: 105 VFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLM-----FHMQRQRKLPEEHARFYS 159
Query: 161 MEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSE-SEYIPEGETHVTSHML 219
EI A+ Y+H R I+++D+KL +L D KL+D+ E + G+T T
Sbjct: 160 AEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTST---F 213
Query: 220 TRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTGR 256
T Y+APE + D + G+L+ E++ GR
Sbjct: 214 CGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 250
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 72/163 (44%), Gaps = 8/163 (4%)
Query: 97 FNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICS-----PHGPHLEPL 151
N + N ++++L+G + + +++ E + G L + S + P L P
Sbjct: 70 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 129
Query: 152 LWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGE 211
+++A EI + MAY++ V +D+ + E K+ DF + I E +
Sbjct: 130 SLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETD 186
Query: 212 THVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
R+++PE + G+ +DV+ FG++L E+ T
Sbjct: 187 XXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 87/203 (42%), Gaps = 22/203 (10%)
Query: 63 ASEHYKLYKGFLENR------PISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIG 116
A E ++YKG L+ P+++ Y+E Q +H NI++L G
Sbjct: 54 AGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEG 113
Query: 117 CCIETEIPILVFEFVEYGTLADRICSPHGPH--LEPLLWRHRLKIAMEIGNAMAYIHIGF 174
+ + +++ E++E G L + G L+ + + M+ M Y+H
Sbjct: 114 VISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVH--- 170
Query: 175 RRPIVFKDIKLSQILFDEYNVAKLSDFSESEYI---PEGETHVTSHMLTRTKRYLAPEYI 231
+D+ IL + V K+SDF S + PE T+ TS R+ APE I
Sbjct: 171 ------RDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA-TYTTSGGKIPI-RWTAPEAI 222
Query: 232 LTGLCNEKTDVFCFGMLLLELLT 254
+DV+ FG+++ E++T
Sbjct: 223 SYRKFTSASDVWSFGIVMWEVMT 245
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 73/163 (44%), Gaps = 8/163 (4%)
Query: 97 FNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICS-----PHGPHLEPL 151
N + N ++++L+G + + +++ E + G L + S + P L P
Sbjct: 63 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 122
Query: 152 LWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGE 211
+++A EI + MAY++ V +D+ + E K+ DF + I E +
Sbjct: 123 SLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 179
Query: 212 THVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+ R+++PE + G+ +DV+ FG++L E+ T
Sbjct: 180 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 65/152 (42%), Gaps = 12/152 (7%)
Query: 104 AQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEI 163
+ + H NIL+L G + L+ E+ GT+ + L + E+
Sbjct: 67 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK-----LSRFDEQRTATYITEL 121
Query: 164 GNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTK 223
NA++Y H + ++ +DIK +L K++DF S + P L T
Sbjct: 122 ANALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTT----LCGTL 174
Query: 224 RYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
YL PE I + +EK D++ G+L E L G
Sbjct: 175 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 89/213 (41%), Gaps = 11/213 (5%)
Query: 50 KIATNNYNGHQVIASEHYKLYKGFLENRP---ISVMKFGDNYSENGENFCFNNIVFAAQM 106
KI + G + + KG +++ P +++ + S N +
Sbjct: 11 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEF 70
Query: 107 NHRNILKLIGCCIETEIPILVFEFVEYGTLADRICS-----PHGPHLEPLLWRHRLKIAM 161
N ++++L+G + + +++ E + G L + S + P L P +++A
Sbjct: 71 NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAG 130
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
EI + MAY++ V +D+ + E K+ DF + I E +
Sbjct: 131 EIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLL 187
Query: 222 TKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
R+++PE + G+ +DV+ FG++L E+ T
Sbjct: 188 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 73/163 (44%), Gaps = 8/163 (4%)
Query: 97 FNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICS-----PHGPHLEPL 151
N + N ++++L+G + + +++ E + G L + S + P L P
Sbjct: 98 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 157
Query: 152 LWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGE 211
+++A EI + MAY++ V +D+ + E K+ DF + I E +
Sbjct: 158 SLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 214
Query: 212 THVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+ R+++PE + G+ +DV+ FG++L E+ T
Sbjct: 215 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 80/178 (44%), Gaps = 12/178 (6%)
Query: 79 ISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLAD 138
I +K G Y+E Q +H NI++L G +++ ++V E++E G+L D
Sbjct: 78 IKTLKVG--YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-D 134
Query: 139 RICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIH-IGFRRPIVFKDIKLSQILFDEYNVAK 197
H + + + I + M Y+ +GF V +D+ IL + V K
Sbjct: 135 SFLRKHDAQFTVI---QLVGMLRGIASGMKYLSDMGF----VHRDLAARNILINSNLVCK 187
Query: 198 LSDFSESEYIPEG-ETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+SDF S + + E T+ R+ +PE I +DV+ +G++L E+++
Sbjct: 188 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 72/158 (45%), Gaps = 14/158 (8%)
Query: 108 HRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHL-----------EPLLWRHR 156
H+NI+ L+G C + ++ E+ G L + + + P + E + ++
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 157 LKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTS 216
+ ++ M Y+ + + +D+ +L E NV K++DF + I + + +
Sbjct: 160 VSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 217 HMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+++APE + + ++DV+ FG+L+ E+ T
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 72/158 (45%), Gaps = 14/158 (8%)
Query: 108 HRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHL-----------EPLLWRHR 156
H+NI+ L+G C + ++ E+ G L + + + P + E + ++
Sbjct: 89 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 148
Query: 157 LKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTS 216
+ ++ M Y+ + + +D+ +L E NV K++DF + I + + +
Sbjct: 149 VSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 205
Query: 217 HMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+++APE + + ++DV+ FG+L+ E+ T
Sbjct: 206 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 73/163 (44%), Gaps = 8/163 (4%)
Query: 97 FNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICS-----PHGPHLEPL 151
N + N ++++L+G + + +++ E + G L + S + P L P
Sbjct: 69 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 128
Query: 152 LWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGE 211
+++A EI + MAY++ V +D+ + E K+ DF + I E +
Sbjct: 129 SLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 185
Query: 212 THVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+ R+++PE + G+ +DV+ FG++L E+ T
Sbjct: 186 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 73/163 (44%), Gaps = 8/163 (4%)
Query: 97 FNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICS-----PHGPHLEPL 151
N + N ++++L+G + + +++ E + G L + S + P L P
Sbjct: 70 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 129
Query: 152 LWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGE 211
+++A EI + MAY++ V +D+ + E K+ DF + I E +
Sbjct: 130 SLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 186
Query: 212 THVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+ R+++PE + G+ +DV+ FG++L E+ T
Sbjct: 187 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 73/163 (44%), Gaps = 8/163 (4%)
Query: 97 FNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICS-----PHGPHLEPL 151
N + N ++++L+G + + +++ E + G L + S + P L P
Sbjct: 67 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 126
Query: 152 LWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGE 211
+++A EI + MAY++ V +D+ + E K+ DF + I E +
Sbjct: 127 SLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 183
Query: 212 THVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+ R+++PE + G+ +DV+ FG++L E+ T
Sbjct: 184 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 72/158 (45%), Gaps = 14/158 (8%)
Query: 108 HRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHL-----------EPLLWRHR 156
H+NI+ L+G C + ++ E+ G L + + + P + E + ++
Sbjct: 87 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 146
Query: 157 LKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTS 216
+ ++ M Y+ + + +D+ +L E NV K++DF + I + + +
Sbjct: 147 VSCTYQLARGMEYLA---SQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKT 203
Query: 217 HMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+++APE + + ++DV+ FG+L+ E+ T
Sbjct: 204 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 98/237 (41%), Gaps = 44/237 (18%)
Query: 29 KLIISCDGKRNPIRSF------SAGELKIATNNYNGHQVIASEHYKLYKGFLENRPISVM 82
+L++S R + +F S G + IAT + G QV +
Sbjct: 35 QLVVSPGDPREYLANFIKIGEGSTGIVCIATEKHTGKQV-------------------AV 75
Query: 83 KFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICS 142
K D + FN +V +H N++ + + + +V EF+E G L D +
Sbjct: 76 KKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIVT- 134
Query: 143 PHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFS 202
H E + + + + A++Y+H + ++ +DIK IL KLSDF
Sbjct: 135 -HTRMNEEQI----ATVCLSVLRALSYLH---NQGVIHRDIKSDSILLTSDGRIKLSDFG 186
Query: 203 ----ESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
S+ +P+ + L T ++APE I + D++ G++++E++ G
Sbjct: 187 FCAQVSKEVPKRKX------LVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDG 237
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 73/163 (44%), Gaps = 8/163 (4%)
Query: 97 FNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICS-----PHGPHLEPL 151
N + N ++++L+G + + +++ E + G L + S + P L P
Sbjct: 69 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 128
Query: 152 LWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGE 211
+++A EI + MAY++ V +D+ + E K+ DF + I E +
Sbjct: 129 SLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 185
Query: 212 THVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+ R+++PE + G+ +DV+ FG++L E+ T
Sbjct: 186 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 72/158 (45%), Gaps = 14/158 (8%)
Query: 108 HRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHL-----------EPLLWRHR 156
H+NI+ L+G C + ++ E+ G L + + + P + E + ++
Sbjct: 92 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 151
Query: 157 LKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTS 216
+ ++ M Y+ + + +D+ +L E NV K++DF + I + + +
Sbjct: 152 VSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 208
Query: 217 HMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+++APE + + ++DV+ FG+L+ E+ T
Sbjct: 209 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 86/182 (47%), Gaps = 23/182 (12%)
Query: 90 ENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLE 149
+N E F + V ++H +I+KLIG IE E ++ E YG L G +LE
Sbjct: 67 DNKEKF-MSEAVIMKNLDHPHIVKLIGI-IEEEPTWIIMELYPYGEL--------GHYLE 116
Query: 150 PLLWRHRLKI------AMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSE 203
++ LK+ +++I AMAY+ V +DI + IL KL DF
Sbjct: 117 RN--KNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGL 171
Query: 204 SEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT-GRRDNILL 262
S YI E E + + + ++++PE I +DV+ F + + E+L+ G++ L
Sbjct: 172 SRYI-EDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWL 230
Query: 263 EH 264
E+
Sbjct: 231 EN 232
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 86/182 (47%), Gaps = 23/182 (12%)
Query: 90 ENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLE 149
+N E F + V ++H +I+KLIG IE E ++ E YG L G +LE
Sbjct: 51 DNKEKF-MSEAVIMKNLDHPHIVKLIGI-IEEEPTWIIMELYPYGEL--------GHYLE 100
Query: 150 PLLWRHRLKI------AMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSE 203
++ LK+ +++I AMAY+ V +DI + IL KL DF
Sbjct: 101 RN--KNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGL 155
Query: 204 SEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT-GRRDNILL 262
S YI E E + + + ++++PE I +DV+ F + + E+L+ G++ L
Sbjct: 156 SRYI-EDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWL 214
Query: 263 EH 264
E+
Sbjct: 215 EN 216
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 89/226 (39%), Gaps = 41/226 (18%)
Query: 55 NYNGHQVIASEHYKLYKGFLENRPISVMKFGDNY----------------------SENG 92
N +G I + H+ + F RP+ KFG+ Y E
Sbjct: 8 NSSGTPDILTRHFTI-DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGV 66
Query: 93 ENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRI---CSPHGPHLE 149
E+ I A ++H NIL+L + L+ E+ G L + C+
Sbjct: 67 EHQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCT------- 119
Query: 150 PLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPE 209
+ I E+ +A+ Y H + ++ +DIK +L K++DF S + P
Sbjct: 120 -FDEQRTATIMEELADALMYCH---GKKVIHRDIKPENLLLGLKGELKIADFGWSVHAPS 175
Query: 210 GETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
+ + T YL PE I + NEK D++C G+L ELL G
Sbjct: 176 ----LRRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVG 217
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 95/221 (42%), Gaps = 17/221 (7%)
Query: 98 NNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRL 157
N + + H NIL +G ++ I V ++ E +L + H + + + +
Sbjct: 69 NEVGVLRKTRHVNILLFMGYSTAPQLAI-VTQWCEGSSLYHHL---HASETKFEM-KKLI 123
Query: 158 KIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSH 217
IA + M Y+H + I+ +D+K + I E N K+ DF +
Sbjct: 124 DIARQTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFE 180
Query: 218 MLTRTKRYLAPEYILTGLCNE---KTDVFCFGMLLLELLTGRRDNILLEHVKKHVENNRL 274
L+ + ++APE I N ++DV+ FG++L EL+TG+ + + + +E
Sbjct: 181 QLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGR 240
Query: 275 GEIVDPIVVEDKSCPEKEXXXXXXXXXIFECVNESAGDRPT 315
G + + +CP++ + EC+ + +RP+
Sbjct: 241 GSLSPDLSKVRSNCPKR------MKRLMAECLKKKRDERPS 275
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 72/158 (45%), Gaps = 14/158 (8%)
Query: 108 HRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHL-----------EPLLWRHR 156
H+NI+ L+G C + ++ E+ G L + + + P + E + ++
Sbjct: 100 HKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 157 LKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTS 216
+ ++ M Y+ + + +D+ +L E NV K++DF + I + + +
Sbjct: 160 VSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 217 HMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+++APE + + ++DV+ FG+L+ E+ T
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 86/182 (47%), Gaps = 23/182 (12%)
Query: 90 ENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLE 149
+N E F + V ++H +I+KLIG IE E ++ E YG L G +LE
Sbjct: 55 DNKEKF-MSEAVIMKNLDHPHIVKLIGI-IEEEPTWIIMELYPYGEL--------GHYLE 104
Query: 150 PLLWRHRLKI------AMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSE 203
++ LK+ +++I AMAY+ V +DI + IL KL DF
Sbjct: 105 RN--KNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGL 159
Query: 204 SEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT-GRRDNILL 262
S YI E E + + + ++++PE I +DV+ F + + E+L+ G++ L
Sbjct: 160 SRYI-EDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWL 218
Query: 263 EH 264
E+
Sbjct: 219 EN 220
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 53/98 (54%), Gaps = 7/98 (7%)
Query: 160 AMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSE-SEYIPEGETHVTSHM 218
A EI + ++H +R I+++D+KL ++ D K++DF E++ +G VT+
Sbjct: 126 AAEISIGLFFLH---KRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDG---VTTRE 179
Query: 219 LTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTGR 256
T Y+APE I + D + +G+LL E+L G+
Sbjct: 180 FCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQ 217
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 73/163 (44%), Gaps = 8/163 (4%)
Query: 97 FNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICS-----PHGPHLEPL 151
N + N ++++L+G + + +++ E + G L + S + P L P
Sbjct: 76 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 135
Query: 152 LWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGE 211
+++A EI + MAY++ V +D+ + E K+ DF + I E +
Sbjct: 136 SLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 192
Query: 212 THVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+ R+++PE + G+ +DV+ FG++L E+ T
Sbjct: 193 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 66/157 (42%), Gaps = 12/157 (7%)
Query: 101 VFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIA 160
VF NH ++ L C V E+V G L H L H +
Sbjct: 73 VFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLM-----FHMQRQRKLPEEHARFYS 127
Query: 161 MEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSE-SEYIPEGETHVTSHML 219
EI A+ Y+H R I+++D+KL +L D KL+D+ E + G+ T+
Sbjct: 128 AEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD---TTSXF 181
Query: 220 TRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTGR 256
T Y+APE + D + G+L+ E++ GR
Sbjct: 182 CGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 218
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 70/166 (42%), Gaps = 12/166 (7%)
Query: 90 ENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLE 149
E E+ I + + H NIL++ + + L+ EF G L + HG E
Sbjct: 56 EGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQK-HGRFDE 114
Query: 150 PLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPE 209
+ E+ +A+ Y H R ++ +DIK +L K++DF S + P
Sbjct: 115 ----QRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS 167
Query: 210 GETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
+ + T YL PE I +EK D++C G+L E L G
Sbjct: 168 ----LRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 209
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 70/166 (42%), Gaps = 12/166 (7%)
Query: 90 ENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLE 149
E E+ I + + H NIL++ + + L+ EF G L + HG E
Sbjct: 55 EGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQK-HGRFDE 113
Query: 150 PLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPE 209
+ E+ +A+ Y H R ++ +DIK +L K++DF S + P
Sbjct: 114 ----QRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS 166
Query: 210 GETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
+ + T YL PE I +EK D++C G+L E L G
Sbjct: 167 ----LRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 80/199 (40%), Gaps = 15/199 (7%)
Query: 68 KLYKGFLENRP-------ISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIE 120
++Y+G + P ++V + YSE E + ++ NH+NI++ IG ++
Sbjct: 60 EVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ 119
Query: 121 TEIPILVFEFVEYGTLAD--RICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPI 178
+ ++ E + G L R P L L +A +I Y+
Sbjct: 120 SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHF 176
Query: 179 VFKDIKLSQILF---DEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGL 235
+ +DI L VAK+ DF + I + +++ PE + G+
Sbjct: 177 IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGI 236
Query: 236 CNEKTDVFCFGMLLLELLT 254
KTD + FG+LL E+ +
Sbjct: 237 FTSKTDTWSFGVLLWEIFS 255
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 70/166 (42%), Gaps = 12/166 (7%)
Query: 90 ENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLE 149
E E+ I + + H NIL++ + + L+ EF G L + HG E
Sbjct: 55 EGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQK-HGRFDE 113
Query: 150 PLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPE 209
+ E+ +A+ Y H R ++ +DIK +L K++DF S + P
Sbjct: 114 ----QRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS 166
Query: 210 GETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
+ + T YL PE I +EK D++C G+L E L G
Sbjct: 167 ----LRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 72/158 (45%), Gaps = 14/158 (8%)
Query: 108 HRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHL-----------EPLLWRHR 156
H+NI+ L+G C + ++ E+ G L + + + P + E + ++
Sbjct: 100 HKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 157 LKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTS 216
+ ++ M Y+ + + +D+ +L E NV K++DF + I + + +
Sbjct: 160 VSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 217 HMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+++APE + + ++DV+ FG+L+ E+ T
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 66/157 (42%), Gaps = 12/157 (7%)
Query: 101 VFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIA 160
VF NH ++ L C V E+V G L H L H +
Sbjct: 58 VFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLM-----FHMQRQRKLPEEHARFYS 112
Query: 161 MEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSE-SEYIPEGETHVTSHML 219
EI A+ Y+H R I+++D+KL +L D KL+D+ E + G+ T+
Sbjct: 113 AEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD---TTSXF 166
Query: 220 TRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTGR 256
T Y+APE + D + G+L+ E++ GR
Sbjct: 167 CGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 203
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 72/158 (45%), Gaps = 14/158 (8%)
Query: 108 HRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHL-----------EPLLWRHR 156
H+NI+ L+G C + ++ E+ G L + + + P + E + ++
Sbjct: 146 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 205
Query: 157 LKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTS 216
+ ++ M Y+ + + +D+ +L E NV K++DF + I + + +
Sbjct: 206 VSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 262
Query: 217 HMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+++APE + + ++DV+ FG+L+ E+ T
Sbjct: 263 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 75/163 (46%), Gaps = 16/163 (9%)
Query: 100 IVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKI 159
I + H+NI++ +G E + E V G+L+ + S GP L + I
Sbjct: 70 IALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGP-----LKDNEQTI 124
Query: 160 AM---EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYN-VAKLSDFSESEYIPEGETHVT 215
+I + Y+H IV +DIK +L + Y+ V K+SDF S+ + +
Sbjct: 125 GFYTKQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRL--AGINPC 179
Query: 216 SHMLTRTKRYLAPEYILTGL--CNEKTDVFCFGMLLLELLTGR 256
+ T T +Y+APE I G + D++ G ++E+ TG+
Sbjct: 180 TETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 222
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 96/212 (45%), Gaps = 41/212 (19%)
Query: 47 GELKIATNNYNGHQVIASEHYKLYKGFLENRPISVMKFGDNYSENGENFCFNNIVFAAQM 106
GE+ +AT YN H +A + MK G S + E F V +
Sbjct: 196 GEVWMAT--YNKHTKVA---------------VKTMKPG---SMSVEAFLAEANVMKT-L 234
Query: 107 NHRNILKLIGCCIETEIPI-LVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGN 165
H ++KL + T+ PI ++ EF+ G+L D + S G +PL + + +I
Sbjct: 235 QHDKLVKL--HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSK-QPL--PKLIDFSAQIAE 289
Query: 166 AMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRY 225
MA+I +R + +D++ + IL V K++DF G V + + +
Sbjct: 290 GMAFIE---QRNYIHRDLRAANILVSASLVCKIADF--------GLARVGAKFPIK---W 335
Query: 226 LAPEYILTGLCNEKTDVFCFGMLLLELLTGRR 257
APE I G K+DV+ FG+LL+E++T R
Sbjct: 336 TAPEAINFGSFTIKSDVWSFGILLMEIVTYGR 367
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 66/157 (42%), Gaps = 12/157 (7%)
Query: 101 VFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIA 160
VF NH ++ L C V E+V G L H L H +
Sbjct: 62 VFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLM-----FHMQRQRKLPEEHARFYS 116
Query: 161 MEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSE-SEYIPEGETHVTSHML 219
EI A+ Y+H R I+++D+KL +L D KL+D+ E + G+ T+
Sbjct: 117 AEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD---TTSXF 170
Query: 220 TRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTGR 256
T Y+APE + D + G+L+ E++ GR
Sbjct: 171 CGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 207
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/177 (19%), Positives = 80/177 (45%), Gaps = 8/177 (4%)
Query: 78 PISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLA 137
P+ + D ++++ ++H +I++L+G C + + LV +++ G+L
Sbjct: 44 PVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQ-LVTQYLPLGSLL 102
Query: 138 DRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAK 197
D + G LL L ++I M Y+ +V +++ +L + +
Sbjct: 103 DHVRQHRGALGPQLL----LNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQ 155
Query: 198 LSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
++DF ++ +P + + +++A E I G ++DV+ +G+ + EL+T
Sbjct: 156 VADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 71/158 (44%), Gaps = 14/158 (8%)
Query: 108 HRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHL-----------EPLLWRHR 156
H+NI+ L+G C + ++ E+ G L + + + P + E + ++
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDL 159
Query: 157 LKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTS 216
+ ++ M Y+ + + +D+ +L E NV K++DF + I + +
Sbjct: 160 VSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKT 216
Query: 217 HMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+++APE + + ++DV+ FG+L+ E+ T
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 71/158 (44%), Gaps = 14/158 (8%)
Query: 108 HRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHL-----------EPLLWRHR 156
H+NI+ L+G C + ++ E+ G L + + + P + E + ++
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 157 LKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTS 216
+ ++ M Y+ + + +D+ +L E NV K++DF + I + +
Sbjct: 160 VSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKT 216
Query: 217 HMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+++APE + + ++DV+ FG+L+ E+ T
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 75/163 (46%), Gaps = 16/163 (9%)
Query: 100 IVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKI 159
I + H+NI++ +G E + E V G+L+ + S GP L + I
Sbjct: 56 IALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGP-----LKDNEQTI 110
Query: 160 AM---EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYN-VAKLSDFSESEYIPEGETHVT 215
+I + Y+H IV +DIK +L + Y+ V K+SDF S+ + +
Sbjct: 111 GFYTKQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRL--AGINPC 165
Query: 216 SHMLTRTKRYLAPEYILTGL--CNEKTDVFCFGMLLLELLTGR 256
+ T T +Y+APE I G + D++ G ++E+ TG+
Sbjct: 166 TETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 208
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 71/152 (46%), Gaps = 12/152 (7%)
Query: 106 MNHRNILKLIGCCIET--EIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEI 163
+ H +I+K GCC + + LV E+V G+L D + H L LL A +I
Sbjct: 73 LYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL-PRHSIGLAQLLL-----FAQQI 126
Query: 164 GNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEG-ETHVTSHMLTRT 222
MAY+H + + +++ +L D + K+ DF ++ +PEG E +
Sbjct: 127 CEGMAYLHA---QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP 183
Query: 223 KRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+ APE + +DV+ FG+ L ELLT
Sbjct: 184 VFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 70/150 (46%), Gaps = 8/150 (5%)
Query: 110 NILKLIGCCIETEIPILVFEFVEYGTLAD-----RICSPHGPHLEPLLWRHRLKIAMEIG 164
++++L+G + + ++V E + +G L R + + P P + +++A EI
Sbjct: 78 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 137
Query: 165 NAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKR 224
+ MAY++ + V +D+ + K+ DF + I E + R
Sbjct: 138 DGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 194
Query: 225 YLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
++APE + G+ +D++ FG++L E+ +
Sbjct: 195 WMAPESLKDGVFTTSSDMWSFGVVLWEITS 224
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 70/150 (46%), Gaps = 8/150 (5%)
Query: 110 NILKLIGCCIETEIPILVFEFVEYGTLAD-----RICSPHGPHLEPLLWRHRLKIAMEIG 164
++++L+G + + ++V E + +G L R + + P P + +++A EI
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 165 NAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKR 224
+ MAY++ + V +D+ + K+ DF + I E + R
Sbjct: 141 DGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 197
Query: 225 YLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
++APE + G+ +D++ FG++L E+ +
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/177 (19%), Positives = 80/177 (45%), Gaps = 8/177 (4%)
Query: 78 PISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLA 137
P+ + D ++++ ++H +I++L+G C + + LV +++ G+L
Sbjct: 62 PVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQ-LVTQYLPLGSLL 120
Query: 138 DRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAK 197
D + G LL L ++I M Y+ +V +++ +L + +
Sbjct: 121 DHVRQHRGALGPQLL----LNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQ 173
Query: 198 LSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
++DF ++ +P + + +++A E I G ++DV+ +G+ + EL+T
Sbjct: 174 VADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/158 (19%), Positives = 72/158 (45%), Gaps = 14/158 (8%)
Query: 108 HRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHL-----------EPLLWRHR 156
H+NI+ L+G C + ++ E+ G L + + + P + E + ++
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 157 LKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTS 216
+ ++ M Y+ + + +D+ +L E NV +++DF + I + + +
Sbjct: 160 VSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKT 216
Query: 217 HMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+++APE + + ++DV+ FG+L+ E+ T
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 72/149 (48%), Gaps = 12/149 (8%)
Query: 108 HRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAM 167
H +I+KL +V E+V G L D IC HG +E + R ++ +I +A+
Sbjct: 70 HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICK-HG-RVEEMEAR---RLFQQILSAV 124
Query: 168 AYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLA 227
Y H R +V +D+K +L D + AK++DF S + +GE S + Y A
Sbjct: 125 DYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDS---CGSPNYAA 178
Query: 228 PEYILTGL-CNEKTDVFCFGMLLLELLTG 255
PE I L + D++ G++L LL G
Sbjct: 179 PEVISGRLYAGPEVDIWSCGVILYALLCG 207
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 71/152 (46%), Gaps = 12/152 (7%)
Query: 106 MNHRNILKLIGCCIET--EIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEI 163
+ H +I+K GCC + + LV E+V G+L D + H L LL A +I
Sbjct: 73 LYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL-PRHSIGLAQLLL-----FAQQI 126
Query: 164 GNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEG-ETHVTSHMLTRT 222
MAY+H + + +++ +L D + K+ DF ++ +PEG E +
Sbjct: 127 CEGMAYLH---SQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP 183
Query: 223 KRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+ APE + +DV+ FG+ L ELLT
Sbjct: 184 VFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 71/150 (47%), Gaps = 8/150 (5%)
Query: 110 NILKLIGCCIETEIPILVFEFVEYGTLAD-----RICSPHGPHLEPLLWRHRLKIAMEIG 164
++++L+G + + ++V E + +G L R + + P P + +++A EI
Sbjct: 80 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 139
Query: 165 NAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKR 224
+ MAY++ + V +D+ + K+ DF + I E + + R
Sbjct: 140 DGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 196
Query: 225 YLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
++APE + G+ +D++ FG++L E+ +
Sbjct: 197 WMAPESLKDGVFTTSSDMWSFGVVLWEITS 226
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 80/178 (44%), Gaps = 12/178 (6%)
Query: 79 ISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLAD 138
I +K G Y+E Q +H NI++L G +++ ++V E++E G+L D
Sbjct: 78 IKTLKVG--YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-D 134
Query: 139 RICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIH-IGFRRPIVFKDIKLSQILFDEYNVAK 197
H + + + I + M Y+ +G+ V +D+ IL + V K
Sbjct: 135 SFLRKHDAQFTVI---QLVGMLRGIASGMKYLSDMGY----VHRDLAARNILINSNLVCK 187
Query: 198 LSDFSESEYIPEG-ETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+SDF S + + E T+ R+ +PE I +DV+ +G++L E+++
Sbjct: 188 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 80/178 (44%), Gaps = 12/178 (6%)
Query: 79 ISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLAD 138
I +K G Y+E Q +H NI++L G +++ ++V E++E G+L D
Sbjct: 66 IKTLKVG--YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-D 122
Query: 139 RICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIH-IGFRRPIVFKDIKLSQILFDEYNVAK 197
H + + + I + M Y+ +G+ V +D+ IL + V K
Sbjct: 123 SFLRKHDAQFTVI---QLVGMLRGIASGMKYLSDMGY----VHRDLAARNILINSNLVCK 175
Query: 198 LSDFSESEYIPEG-ETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+SDF S + + E T+ R+ +PE I +DV+ +G++L E+++
Sbjct: 176 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 233
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 70/150 (46%), Gaps = 8/150 (5%)
Query: 110 NILKLIGCCIETEIPILVFEFVEYGTLAD-----RICSPHGPHLEPLLWRHRLKIAMEIG 164
++++L+G + + ++V E + +G L R + + P P + +++A EI
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 165 NAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKR 224
+ MAY++ + V +D+ + K+ DF + I E + R
Sbjct: 141 DGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 197
Query: 225 YLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
++APE + G+ +D++ FG++L E+ +
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 80/178 (44%), Gaps = 12/178 (6%)
Query: 79 ISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLAD 138
I +K G Y+E Q +H NI++L G +++ ++V E++E G+L D
Sbjct: 49 IKTLKVG--YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-D 105
Query: 139 RICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIH-IGFRRPIVFKDIKLSQILFDEYNVAK 197
H + + + I + M Y+ +G+ V +D+ IL + V K
Sbjct: 106 SFLRKHDAQFTVI---QLVGMLRGIASGMKYLSDMGY----VHRDLAARNILINSNLVCK 158
Query: 198 LSDFSESEYIPEG-ETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+SDF S + + E T+ R+ +PE I +DV+ +G++L E+++
Sbjct: 159 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 80/178 (44%), Gaps = 12/178 (6%)
Query: 79 ISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLAD 138
I +K G Y+E Q +H NI++L G +++ ++V E++E G+L D
Sbjct: 78 IKTLKVG--YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-D 134
Query: 139 RICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIH-IGFRRPIVFKDIKLSQILFDEYNVAK 197
H + + + I + M Y+ +G+ V +D+ IL + V K
Sbjct: 135 SFLRKHDAQFTVI---QLVGMLRGIASGMKYLSDMGY----VHRDLAARNILINSNLVCK 187
Query: 198 LSDFSESEYIPEG-ETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+SDF S + + E T+ R+ +PE I +DV+ +G++L E+++
Sbjct: 188 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 80/178 (44%), Gaps = 12/178 (6%)
Query: 79 ISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLAD 138
I +K G Y+E Q +H NI++L G +++ ++V E++E G+L D
Sbjct: 78 IKTLKVG--YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-D 134
Query: 139 RICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIH-IGFRRPIVFKDIKLSQILFDEYNVAK 197
H + + + I + M Y+ +G+ V +D+ IL + V K
Sbjct: 135 SFLRKHDAQFTVI---QLVGMLRGIASGMKYLSDMGY----VHRDLAARNILINSNLVCK 187
Query: 198 LSDFSESEYIPEG-ETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+SDF S + + E T+ R+ +PE I +DV+ +G++L E+++
Sbjct: 188 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 80/178 (44%), Gaps = 12/178 (6%)
Query: 79 ISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLAD 138
I +K G Y+E Q +H NI++L G +++ ++V E++E G+L D
Sbjct: 76 IKTLKVG--YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-D 132
Query: 139 RICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIH-IGFRRPIVFKDIKLSQILFDEYNVAK 197
H + + + I + M Y+ +G+ V +D+ IL + V K
Sbjct: 133 SFLRKHDAQFTVI---QLVGMLRGIASGMKYLSDMGY----VHRDLAARNILINSNLVCK 185
Query: 198 LSDFSESEYIPEG-ETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+SDF S + + E T+ R+ +PE I +DV+ +G++L E+++
Sbjct: 186 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 243
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 80/178 (44%), Gaps = 12/178 (6%)
Query: 79 ISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLAD 138
I +K G Y+E Q +H NI++L G +++ ++V E++E G+L D
Sbjct: 78 IKTLKVG--YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-D 134
Query: 139 RICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIH-IGFRRPIVFKDIKLSQILFDEYNVAK 197
H + + + I + M Y+ +G+ V +D+ IL + V K
Sbjct: 135 SFLRKHDAQFTVI---QLVGMLRGIASGMKYLSDMGY----VHRDLAARNILINSNLVCK 187
Query: 198 LSDFSESEYIPEG-ETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+SDF S + + E T+ R+ +PE I +DV+ +G++L E+++
Sbjct: 188 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 72/163 (44%), Gaps = 8/163 (4%)
Query: 97 FNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICS-----PHGPHLEPL 151
N + N ++++L+G + + +++ E + G L + S + P L P
Sbjct: 63 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 122
Query: 152 LWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGE 211
+++A EI + MAY++ V +D+ E K+ DF + I E +
Sbjct: 123 SLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETD 179
Query: 212 THVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+ R+++PE + G+ +DV+ FG++L E+ T
Sbjct: 180 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 71/157 (45%), Gaps = 14/157 (8%)
Query: 101 VFAAQMNHRNILKLIGCCIETEIPIL-VFEFVEYGTLADRICSPHGPHLEPLLWRHRLKI 159
+ + NH + +L CC +T + V EFV G L I R R
Sbjct: 76 ILSLARNHPFLTQLF-CCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEA----RARF-Y 129
Query: 160 AMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSE-SEYIPEGETHVTSHM 218
A EI +A+ ++H + I+++D+KL +L D KL+DF E I G VT+
Sbjct: 130 AAEIISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNG---VTTAT 183
Query: 219 LTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
T Y+APE + L D + G+LL E+L G
Sbjct: 184 FCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCG 220
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 68/157 (43%), Gaps = 12/157 (7%)
Query: 107 NHRNILKLIGCCIETEIPILVFEFVEYGTLAD------RICSPHGPHL---EPLLWRHRL 157
H NI+ L+G C +++ E+ YG L + R+ L R L
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLL 167
Query: 158 KIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSH 217
+ ++ MA++ + + +D+ +L +VAK+ DF + I ++
Sbjct: 168 HFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG 224
Query: 218 MLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+++APE I + ++DV+ +G+LL E+ +
Sbjct: 225 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 87/215 (40%), Gaps = 33/215 (15%)
Query: 45 SAGELKIATNNYNGHQVIASEHYKLYKGFLENRPISVMKFGDNYSEN-GENFCFNNIVFA 103
+AGE+++A N V I MK + EN + C N +
Sbjct: 18 AAGEVQLAVNRVTEEAVAVK--------------IVDMKRAVDCPENIKKEICINKM--- 60
Query: 104 AQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHG-PHLEPLLWRHRLKIAME 162
+NH N++K G E I L E+ G L DRI G P + + H+L
Sbjct: 61 --LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--- 115
Query: 163 IGNAMAYIH-IGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
+ Y+H IG I +DIK +L DE + K+SDF + + +
Sbjct: 116 ---GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 168
Query: 222 TKRYLAPEYI-LTGLCNEKTDVFCFGMLLLELLTG 255
T Y+APE + E DV+ G++L +L G
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 71/150 (47%), Gaps = 8/150 (5%)
Query: 110 NILKLIGCCIETEIPILVFEFVEYGTLAD-----RICSPHGPHLEPLLWRHRLKIAMEIG 164
++++L+G + + ++V E + +G L R + + P P + +++A EI
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 165 NAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKR 224
+ MAY++ + V +D+ + K+ DF + I E + + R
Sbjct: 141 DGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 197
Query: 225 YLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
++APE + G+ +D++ FG++L E+ +
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 78/181 (43%), Gaps = 14/181 (7%)
Query: 76 NRPISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGT 135
R ++V K D + FN +V H N++++ + E ++ EF++ G
Sbjct: 70 GRQVAV-KMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGA 128
Query: 136 LADRICSPHGPHLEPLLWRHRLKIAME-IGNAMAYIHIGFRRPIVFKDIKLSQILFDEYN 194
L D + L ++ E + A+AY+H + ++ +DIK IL
Sbjct: 129 LTDIVSQVR-------LNEEQIATVCEAVLQALAYLHA---QGVIHRDIKSDSILLTLDG 178
Query: 195 VAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
KLSDF I + L T ++APE I L + D++ G++++E++
Sbjct: 179 RVKLSDFGFCAQISKDVPK--RKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVD 236
Query: 255 G 255
G
Sbjct: 237 G 237
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 66/141 (46%), Gaps = 11/141 (7%)
Query: 117 CCIET-EIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFR 175
C +T E V E++ G L I S H L + A EI + ++H
Sbjct: 85 CTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATF-----YAAEIILGLQFLH---S 136
Query: 176 RPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGL 235
+ IV++D+KL IL D+ K++DF + G+ ++ T Y+APE +L
Sbjct: 137 KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDA--KTNXFCGTPDYIAPEILLGQK 194
Query: 236 CNEKTDVFCFGMLLLELLTGR 256
N D + FG+LL E+L G+
Sbjct: 195 YNHSVDWWSFGVLLYEMLIGQ 215
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 71/158 (44%), Gaps = 24/158 (15%)
Query: 106 MNHRNILKLIGCCIET--EIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEI 163
+ H +I+K GCC + + LV E+V G+L D + H L LL A +I
Sbjct: 68 LYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL-PRHCVGLAQLLL-----FAQQI 121
Query: 164 GNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTK 223
MAY+H + + + + +L D + K+ DF ++ +PEG H R +
Sbjct: 122 CEGMAYLHA---QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEG------HEYYRVR 172
Query: 224 R-------YLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+ APE + +DV+ FG+ L ELLT
Sbjct: 173 EDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 75/155 (48%), Gaps = 20/155 (12%)
Query: 106 MNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHR------LKI 159
++H +++L G C + ++ E++ G L + +L + RHR L++
Sbjct: 61 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLN--------YLREM--RHRFQTQQLLEM 110
Query: 160 AMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHML 219
++ AM Y+ + + +D+ L ++ V K+SDF S Y+ + E + +S
Sbjct: 111 CKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSRGS 166
Query: 220 TRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
R+ PE ++ + K+D++ FG+L+ E+ +
Sbjct: 167 KFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 69/159 (43%), Gaps = 17/159 (10%)
Query: 107 NHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEP-----------LLWRH 155
+H NI+ L+G C L E+ +G L D + +P L +
Sbjct: 84 HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 143
Query: 156 RLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVT 215
L A ++ M Y+ ++ + +D+ IL E VAK++DF S E +V
Sbjct: 144 LLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVK 197
Query: 216 SHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
M R++A E + + +DV+ +G+LL E+++
Sbjct: 198 KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 69/159 (43%), Gaps = 13/159 (8%)
Query: 100 IVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHG-PHLEPLLWRHRLK 158
I A +NH N++K G E I L E+ G L DRI G P + + H+L
Sbjct: 56 ICINAMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM 115
Query: 159 IAMEIGNAMAYIH-IGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSH 217
+ Y+H IG I +DIK +L DE + K+SDF + +
Sbjct: 116 A------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 165
Query: 218 MLTRTKRYLAPEYI-LTGLCNEKTDVFCFGMLLLELLTG 255
+ T Y+APE + E DV+ G++L +L G
Sbjct: 166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 69/159 (43%), Gaps = 17/159 (10%)
Query: 107 NHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEP-----------LLWRH 155
+H NI+ L+G C L E+ +G L D + +P L +
Sbjct: 74 HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 133
Query: 156 RLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVT 215
L A ++ M Y+ ++ + +D+ IL E VAK++DF S E +V
Sbjct: 134 LLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVK 187
Query: 216 SHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
M R++A E + + +DV+ +G+LL E+++
Sbjct: 188 KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 21/173 (12%)
Query: 87 NYSENGENFCFNNIV----FAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICS 142
+YS N + +I+ F ++ H N ++ GC + LV E+ G+ +D +
Sbjct: 88 SYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYC-LGSASDLLEV 146
Query: 143 PHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFS 202
H +PL + +AY+H ++ +D+K IL E + KL DF
Sbjct: 147 ----HKKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFG 199
Query: 203 ESEYIPEGETHVTSHMLTRTKRYLAPEYILT---GLCNEKTDVFCFGMLLLEL 252
+ + ++ T ++APE IL G + K DV+ G+ +EL
Sbjct: 200 SASIM------APANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 246
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 71/158 (44%), Gaps = 24/158 (15%)
Query: 106 MNHRNILKLIGCCIET--EIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEI 163
+ H +I+K GCC + + LV E+V G+L D + H L LL A +I
Sbjct: 67 LYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL-PRHCVGLAQLLL-----FAQQI 120
Query: 164 GNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTK 223
MAY+H + + + + +L D + K+ DF ++ +PEG H R +
Sbjct: 121 CEGMAYLHA---QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEG------HEYYRVR 171
Query: 224 R-------YLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+ APE + +DV+ FG+ L ELLT
Sbjct: 172 EDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/177 (19%), Positives = 83/177 (46%), Gaps = 8/177 (4%)
Query: 78 PISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLA 137
P+++M+ + S + A +++ ++ +L+G C+ + + L+ + + +G L
Sbjct: 80 PVAIMELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLL 138
Query: 138 DRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAK 197
D + H + + ++ L ++I M Y+ R +V +D+ +L K
Sbjct: 139 DYVRE----HKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVK 191
Query: 198 LSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
++DF ++ + E + +++A E IL + ++DV+ +G+ + EL+T
Sbjct: 192 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 78/177 (44%), Gaps = 8/177 (4%)
Query: 78 PISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLA 137
P+++ +N S + A + + +L+G C+ + + LV + + YG L
Sbjct: 48 PVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRLLGICLTSTVQ-LVTQLMPYGCLL 106
Query: 138 DRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAK 197
D + G L + L M+I M+Y+ R +V +D+ +L N K
Sbjct: 107 DHVRENRGR----LGSQDLLNWCMQIAKGMSYLE-DVR--LVHRDLAARNVLVKSPNHVK 159
Query: 198 LSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
++DF + + ET + +++A E IL ++DV+ +G+ + EL+T
Sbjct: 160 ITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 62/132 (46%), Gaps = 12/132 (9%)
Query: 126 LVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKL 185
V E+V G L I G EP H + A EI + ++ + I+++D+KL
Sbjct: 98 FVMEYVNGGDLMYHI-QQVGRFKEP----HAVFYAAEIAIGLFFLQ---SKGIIYRDLKL 149
Query: 186 SQILFDEYNVAKLSDFSE-SEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFC 244
++ D K++DF E I +G VT+ T Y+APE I + D +
Sbjct: 150 DNVMLDSEGHIKIADFGMCKENIWDG---VTTKXFCGTPDYIAPEIIAYQPYGKSVDWWA 206
Query: 245 FGMLLLELLTGR 256
FG+LL E+L G+
Sbjct: 207 FGVLLYEMLAGQ 218
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 21/173 (12%)
Query: 87 NYSENGENFCFNNIV----FAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICS 142
+YS N + +I+ F ++ H N ++ GC + LV E+ G+ +D +
Sbjct: 49 SYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYC-LGSASDLLEV 107
Query: 143 PHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFS 202
H +PL + +AY+H ++ +D+K IL E + KL DF
Sbjct: 108 ----HKKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFG 160
Query: 203 ESEYIPEGETHVTSHMLTRTKRYLAPEYILT---GLCNEKTDVFCFGMLLLEL 252
+ + ++ T ++APE IL G + K DV+ G+ +EL
Sbjct: 161 SASIM------APANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 207
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 62/132 (46%), Gaps = 12/132 (9%)
Query: 126 LVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKL 185
V E+V G L I G EP H + A EI + ++ + I+++D+KL
Sbjct: 419 FVMEYVNGGDLMYHI-QQVGRFKEP----HAVFYAAEIAIGLFFLQ---SKGIIYRDLKL 470
Query: 186 SQILFDEYNVAKLSDFSE-SEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFC 244
++ D K++DF E I +G VT+ T Y+APE I + D +
Sbjct: 471 DNVMLDSEGHIKIADFGMCKENIWDG---VTTKXFCGTPDYIAPEIIAYQPYGKSVDWWA 527
Query: 245 FGMLLLELLTGR 256
FG+LL E+L G+
Sbjct: 528 FGVLLYEMLAGQ 539
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 69/161 (42%), Gaps = 16/161 (9%)
Query: 107 NHRNILKLIGCCIETEIPILVFEFVEYGTLADR--------ICSPHGPHL-----EPLLW 153
NH NI+ L+G C +++ E+ YG L + ICS P + L
Sbjct: 108 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 167
Query: 154 RHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETH 213
L + ++ MA++ + + +D+ IL + K+ DF + +I +
Sbjct: 168 EDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNY 224
Query: 214 VTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
V +++APE I + ++DV+ +G+ L EL +
Sbjct: 225 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/158 (19%), Positives = 71/158 (44%), Gaps = 14/158 (8%)
Query: 108 HRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLE-----------PLLWRHR 156
H+NI+ L+G C + ++ + G L + + + P +E + ++
Sbjct: 100 HKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 157 LKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTS 216
+ ++ M Y+ + + +D+ +L E NV K++DF + I + + +
Sbjct: 160 VSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 217 HMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+++APE + + ++DV+ FG+L+ E+ T
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 64/141 (45%), Gaps = 11/141 (7%)
Query: 117 CCIET-EIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFR 175
C +T E V E++ G L I S H L + A EI + ++H
Sbjct: 86 CTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATF-----YAAEIILGLQFLH---S 137
Query: 176 RPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGL 235
+ IV++D+KL IL D+ K++DF + G+ T Y+APE +L
Sbjct: 138 KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNE--FCGTPDYIAPEILLGQK 195
Query: 236 CNEKTDVFCFGMLLLELLTGR 256
N D + FG+LL E+L G+
Sbjct: 196 YNHSVDWWSFGVLLYEMLIGQ 216
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 80/178 (44%), Gaps = 12/178 (6%)
Query: 79 ISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLAD 138
I +K G Y+E Q +H NI++L G +++ ++V E++E G+L D
Sbjct: 78 IKTLKVG--YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-D 134
Query: 139 RICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIH-IGFRRPIVFKDIKLSQILFDEYNVAK 197
H + + + I + M Y+ +G+ V +D+ IL + V K
Sbjct: 135 SFLRKHDAQFTVI---QLVGMLRGIASGMKYLSDMGY----VHRDLAARNILINSNLVCK 187
Query: 198 LSDFSESEYIPEG-ETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+SDF + + + E T+ R+ +PE I +DV+ +G++L E+++
Sbjct: 188 VSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 76/154 (49%), Gaps = 16/154 (10%)
Query: 105 QMNHRNILKLIGCCIETEIPI-LVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAM-E 162
++NH I+KL +TE + L+ +F+ G L R+ E + +K + E
Sbjct: 82 EVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSK------EVMFTEEDVKFYLAE 134
Query: 163 IGNAMAYIH-IGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
+ A+ ++H +G I+++D+K IL DE KL+DF S+ + E S
Sbjct: 135 LALALDHLHSLG----IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCG 188
Query: 222 TKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
T Y+APE + + D + FG+L+ E+LTG
Sbjct: 189 TVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 70/150 (46%), Gaps = 8/150 (5%)
Query: 110 NILKLIGCCIETEIPILVFEFVEYGTLAD-----RICSPHGPHLEPLLWRHRLKIAMEIG 164
++++L+G + + ++V E + +G L R + + P P + +++A EI
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 165 NAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKR 224
+ MAY++ + V +D+ + K+ DF + I E + R
Sbjct: 141 DGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVR 197
Query: 225 YLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
++APE + G+ +D++ FG++L E+ +
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 76/154 (49%), Gaps = 16/154 (10%)
Query: 105 QMNHRNILKLIGCCIETEIPI-LVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAM-E 162
++NH I+KL +TE + L+ +F+ G L R+ E + +K + E
Sbjct: 83 EVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSK------EVMFTEEDVKFYLAE 135
Query: 163 IGNAMAYIH-IGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
+ A+ ++H +G I+++D+K IL DE KL+DF S+ + E S
Sbjct: 136 LALALDHLHSLG----IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCG 189
Query: 222 TKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
T Y+APE + + D + FG+L+ E+LTG
Sbjct: 190 TVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 76/154 (49%), Gaps = 16/154 (10%)
Query: 105 QMNHRNILKLIGCCIETEIPI-LVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAM-E 162
++NH I+KL +TE + L+ +F+ G L R+ E + +K + E
Sbjct: 82 EVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSK------EVMFTEEDVKFYLAE 134
Query: 163 IGNAMAYIH-IGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
+ A+ ++H +G I+++D+K IL DE KL+DF S+ + E S
Sbjct: 135 LALALDHLHSLG----IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCG 188
Query: 222 TKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
T Y+APE + + D + FG+L+ E+LTG
Sbjct: 189 TVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/177 (18%), Positives = 82/177 (46%), Gaps = 8/177 (4%)
Query: 78 PISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLA 137
P+++ + + S + A +++ ++ +L+G C+ + + L+ + + +G L
Sbjct: 50 PVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLL 108
Query: 138 DRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAK 197
D + H + + ++ L ++I M Y+ R +V +D+ +L K
Sbjct: 109 DYVRE----HKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVK 161
Query: 198 LSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
++DF ++ + E + +++A E IL + ++DV+ +G+ + EL+T
Sbjct: 162 ITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/177 (18%), Positives = 82/177 (46%), Gaps = 8/177 (4%)
Query: 78 PISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLA 137
P+++ + + S + A +++ ++ +L+G C+ + + L+ + + +G L
Sbjct: 48 PVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLL 106
Query: 138 DRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAK 197
D + H + + ++ L ++I M Y+ R +V +D+ +L K
Sbjct: 107 DYVRE----HKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVK 159
Query: 198 LSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
++DF ++ + E + +++A E IL + ++DV+ +G+ + EL+T
Sbjct: 160 ITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/177 (18%), Positives = 82/177 (46%), Gaps = 8/177 (4%)
Query: 78 PISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLA 137
P+++ + + S + A +++ ++ +L+G C+ + + L+ + + +G L
Sbjct: 48 PVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLL 106
Query: 138 DRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAK 197
D + H + + ++ L ++I M Y+ R +V +D+ +L K
Sbjct: 107 DYVRE----HKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVK 159
Query: 198 LSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
++DF ++ + E + +++A E IL + ++DV+ +G+ + EL+T
Sbjct: 160 ITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/158 (19%), Positives = 71/158 (44%), Gaps = 14/158 (8%)
Query: 108 HRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLE-----------PLLWRHR 156
H+NI+ L+G C + ++ + G L + + + P +E + ++
Sbjct: 100 HKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 157 LKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTS 216
+ ++ M Y+ + + +D+ +L E NV K++DF + I + + +
Sbjct: 160 VSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 217 HMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+++APE + + ++DV+ FG+L+ E+ T
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 71/160 (44%), Gaps = 14/160 (8%)
Query: 94 NFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLW 153
N C++ + + + +N + C+ + EF + GTL I G L+ +L
Sbjct: 70 NGCWDGFDYDPETSSKNSSRSKTKCL-----FIQMEFCDKGTLEQWIEKRRGEKLDKVL- 123
Query: 154 RHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETH 213
L++ +I + YIH + ++ +D+K S I + K+ DF +
Sbjct: 124 --ALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKR 178
Query: 214 VTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELL 253
S T RY++PE I + ++ D++ G++L ELL
Sbjct: 179 XRSKG---TLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 81/177 (45%), Gaps = 21/177 (11%)
Query: 88 YSENGENF------CFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRIC 141
YS++ +N +N I ++H NI+KL + + LV EF E G L ++I
Sbjct: 79 YSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQII 138
Query: 142 SPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNV---AKL 198
+ H I +I + + Y+H + IV +DIK IL + N K+
Sbjct: 139 NRH-----KFDECDAANIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIKI 190
Query: 199 SDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
DF S + + + + + T Y+APE +L NEK DV+ G+++ LL G
Sbjct: 191 VDFGLSSFFSK-DYKLRDRL--GTAYYIAPE-VLKKKYNEKCDVWSCGVIMYILLCG 243
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 79/178 (44%), Gaps = 12/178 (6%)
Query: 79 ISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLAD 138
I +K G Y+E Q +H NI++L G +++ ++V E +E G+L D
Sbjct: 78 IKTLKVG--YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSL-D 134
Query: 139 RICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIH-IGFRRPIVFKDIKLSQILFDEYNVAK 197
H + + + I + M Y+ +G+ V +D+ IL + V K
Sbjct: 135 SFLRKHDAQFTVI---QLVGMLRGIASGMKYLSDMGY----VHRDLAARNILINSNLVCK 187
Query: 198 LSDFSESEYIPEG-ETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+SDF S + + E T+ R+ +PE I +DV+ +G++L E+++
Sbjct: 188 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 79/178 (44%), Gaps = 12/178 (6%)
Query: 79 ISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLAD 138
I +K G Y+E Q +H NI++L G +++ ++V E +E G+L D
Sbjct: 49 IKTLKVG--YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSL-D 105
Query: 139 RICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIH-IGFRRPIVFKDIKLSQILFDEYNVAK 197
H + + + I + M Y+ +G+ V +D+ IL + V K
Sbjct: 106 SFLRKHDAQFTVI---QLVGMLRGIASGMKYLSDMGY----VHRDLAARNILINSNLVCK 158
Query: 198 LSDFSESEYIPEG-ETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+SDF S + + E T+ R+ +PE I +DV+ +G++L E+++
Sbjct: 159 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 75/155 (48%), Gaps = 20/155 (12%)
Query: 106 MNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHR------LKI 159
++H +++L G C + ++ E++ G L + +L + RHR L++
Sbjct: 76 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLN--------YLREM--RHRFQTQQLLEM 125
Query: 160 AMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHML 219
++ AM Y+ + + +D+ L ++ V K+SDF S Y+ + E + +S
Sbjct: 126 CKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGS 181
Query: 220 TRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
R+ PE ++ + K+D++ FG+L+ E+ +
Sbjct: 182 KFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 79/178 (44%), Gaps = 12/178 (6%)
Query: 79 ISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLAD 138
I +K G Y+E Q +H NI++L G +++ ++V E++E G+L D
Sbjct: 78 IKTLKVG--YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-D 134
Query: 139 RICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIH-IGFRRPIVFKDIKLSQILFDEYNVAK 197
H + + + I + M Y+ +G+ V +D+ IL + V K
Sbjct: 135 SFLRKHDAQFTVI---QLVGMLRGIASGMKYLSDMGY----VHRDLAARNILINSNLVCK 187
Query: 198 LSDFSESEYIPEG-ETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+SDF + + E T+ R+ +PE I +DV+ +G++L E+++
Sbjct: 188 VSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 98/229 (42%), Gaps = 15/229 (6%)
Query: 106 MNHRNILKLIGCCIET--EIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEI 163
+ H NI+K G C L+ E++ YG+L D + + H E + L+ +I
Sbjct: 71 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQA----HAERIDHIKLLQYTSQI 126
Query: 164 GNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEG-ETHVTSHMLTRT 222
M Y+ G +R + +D+ IL + N K+ DF ++ +P+ E
Sbjct: 127 CKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 183
Query: 223 KRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG-RRDNILLEHVKKHVENNRLGEIVDPI 281
+ APE + + +DV+ FG++L EL T + + + N++ G+++
Sbjct: 184 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 243
Query: 282 VVE----DKSCPEKEXXXXXXXXXIFECVNESAGDRPTMVYAAKQLRQM 326
++E + P + + EC N + RP+ A ++ Q+
Sbjct: 244 LIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 292
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 75/155 (48%), Gaps = 20/155 (12%)
Query: 106 MNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHR------LKI 159
++H +++L G C + ++ E++ G L + +L + RHR L++
Sbjct: 67 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLN--------YLREM--RHRFQTQQLLEM 116
Query: 160 AMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHML 219
++ AM Y+ + + +D+ L ++ V K+SDF S Y+ + E + +S
Sbjct: 117 CKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGS 172
Query: 220 TRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
R+ PE ++ + K+D++ FG+L+ E+ +
Sbjct: 173 KFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 207
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 75/155 (48%), Gaps = 20/155 (12%)
Query: 106 MNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHR------LKI 159
++H +++L G C + ++ E++ G L + +L + RHR L++
Sbjct: 60 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLN--------YLREM--RHRFQTQQLLEM 109
Query: 160 AMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHML 219
++ AM Y+ + + +D+ L ++ V K+SDF S Y+ + E + +S
Sbjct: 110 CKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGS 165
Query: 220 TRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
R+ PE ++ + K+D++ FG+L+ E+ +
Sbjct: 166 KFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 200
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 77/156 (49%), Gaps = 22/156 (14%)
Query: 106 MNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHR------LKI 159
++H +++L G C + ++ E++ G L + +L + RHR L++
Sbjct: 76 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLN--------YLREM--RHRFQTQQLLEM 125
Query: 160 AMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHML 219
++ AM Y+ + + +D+ L ++ V K+SDF S Y+ + E TS +
Sbjct: 126 CKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEE--TSSVG 180
Query: 220 TRTK-RYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
++ R+ PE ++ + K+D++ FG+L+ E+ +
Sbjct: 181 SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 75/155 (48%), Gaps = 20/155 (12%)
Query: 106 MNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHR------LKI 159
++H +++L G C + ++ E++ G L + +L + RHR L++
Sbjct: 61 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLN--------YLREM--RHRFQTQQLLEM 110
Query: 160 AMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHML 219
++ AM Y+ + + +D+ L ++ V K+SDF S Y+ + E + +S
Sbjct: 111 CKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGS 166
Query: 220 TRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
R+ PE ++ + K+D++ FG+L+ E+ +
Sbjct: 167 KFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 78/180 (43%), Gaps = 12/180 (6%)
Query: 78 PISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLA 137
P+++ Y+E Q +H NI+ L G +++ ++V E++E G+L
Sbjct: 52 PVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLD 111
Query: 138 DRICSPHGPH--LEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNV 195
+ G ++ + + M+ + M Y+H +D+ IL + V
Sbjct: 112 TFLKKNDGQFTVIQLVGMLRGISAGMKYLSDMGYVH---------RDLAARNILINSNLV 162
Query: 196 AKLSDFSESEYIPEG-ETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
K+SDF S + + E T+ R+ APE I +DV+ +G+++ E+++
Sbjct: 163 CKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVS 222
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 80/199 (40%), Gaps = 15/199 (7%)
Query: 68 KLYKGFLENRP-------ISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIE 120
++Y+G + P ++V + SE E + ++ NH+NI++ IG ++
Sbjct: 46 EVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ 105
Query: 121 TEIPILVFEFVEYGTLAD--RICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPI 178
+ ++ E + G L R P L L +A +I Y+
Sbjct: 106 SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHF 162
Query: 179 VFKDIKLSQILF---DEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGL 235
+ +DI L VAK+ DF ++ I + +++ PE + G+
Sbjct: 163 IHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPPEAFMEGI 222
Query: 236 CNEKTDVFCFGMLLLELLT 254
KTD + FG+LL E+ +
Sbjct: 223 FTSKTDTWSFGVLLWEIFS 241
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/189 (20%), Positives = 87/189 (46%), Gaps = 16/189 (8%)
Query: 110 NILKLIGCCIETEIPILVFEFVEYGTLAD-----RICSPHGPHLEPLLWRHRLKIAMEIG 164
++++L+G + + ++V E + +G L R + + P P + +++A EI
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 165 NAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKR 224
+ MAY++ + V +++ + K+ DF + I E + + R
Sbjct: 141 DGMAYLNA---KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 197
Query: 225 YLAPEYILTGLCNEKTDVFCFGMLLLELLTGRRDNILLEHVKKHVENNRLGEIV--DPIV 282
++APE + G+ +D++ FG++L E+ + L E + + N ++ + V +
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITS------LAEQPYQGLSNEQVLKFVMDGGYL 251
Query: 283 VEDKSCPEK 291
+ +CPE+
Sbjct: 252 DQPDNCPER 260
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 68/159 (42%), Gaps = 13/159 (8%)
Query: 100 IVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHG-PHLEPLLWRHRLK 158
I +NH N++K G E I L E+ G L DRI G P + + H+L
Sbjct: 55 IXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM 114
Query: 159 IAMEIGNAMAYIH-IGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSH 217
+ Y+H IG I +DIK +L DE + K+SDF + +
Sbjct: 115 A------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 164
Query: 218 MLTRTKRYLAPEYI-LTGLCNEKTDVFCFGMLLLELLTG 255
+ T Y+APE + E DV+ G++L +L G
Sbjct: 165 KMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/177 (18%), Positives = 82/177 (46%), Gaps = 8/177 (4%)
Query: 78 PISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLA 137
P+++ + + S + A +++ ++ +L+G C+ + + L+ + + +G L
Sbjct: 48 PVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLL 106
Query: 138 DRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAK 197
D + H + + ++ L ++I M Y+ R +V +D+ +L K
Sbjct: 107 DYVRE----HKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVK 159
Query: 198 LSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
++DF ++ + E + +++A E IL + ++DV+ +G+ + EL+T
Sbjct: 160 ITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 80/199 (40%), Gaps = 15/199 (7%)
Query: 68 KLYKGFLENRP-------ISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIE 120
++Y+G + P ++V + SE E + +++NH+NI++ IG ++
Sbjct: 46 EVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQ 105
Query: 121 TEIPILVFEFVEYGTLAD--RICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPI 178
+ ++ E + G L R P L L +A +I Y+
Sbjct: 106 SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHF 162
Query: 179 VFKDIKLSQILF---DEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGL 235
+ +DI L VAK+ DF + I + +++ PE + G+
Sbjct: 163 IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGI 222
Query: 236 CNEKTDVFCFGMLLLELLT 254
KTD + FG+LL E+ +
Sbjct: 223 FTSKTDTWSFGVLLWEIFS 241
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 70/164 (42%), Gaps = 18/164 (10%)
Query: 95 FCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHG-PHLEPLLW 153
C N + +NH N++K G E I L E+ G L DRI G P + +
Sbjct: 55 ICINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF 109
Query: 154 RHRLKIAMEIGNAMAYIH-IGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGET 212
H+L + Y+H IG I +DIK +L DE + K+SDF +
Sbjct: 110 FHQLMA------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 159
Query: 213 HVTSHMLTRTKRYLAPEYI-LTGLCNEKTDVFCFGMLLLELLTG 255
+ + T Y+APE + E DV+ G++L +L G
Sbjct: 160 ERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 76/178 (42%), Gaps = 19/178 (10%)
Query: 82 MKFGDNYSEN-GENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRI 140
MK + EN + C N + +NH N++K G E I L E+ G L DRI
Sbjct: 41 MKRAVDCPENIKKEICINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI 95
Query: 141 CSPHG-PHLEPLLWRHRLKIAMEIGNAMAYIH-IGFRRPIVFKDIKLSQILFDEYNVAKL 198
G P + + H+L + Y+H IG I +DIK +L DE + K+
Sbjct: 96 EPDIGMPEPDAQRFFHQLMA------GVVYLHGIG----ITHRDIKPENLLLDERDNLKI 145
Query: 199 SDFSESEYIPEGETHVTSHMLTRTKRYLAPEYI-LTGLCNEKTDVFCFGMLLLELLTG 255
SDF + + + T Y+APE + E DV+ G++L +L G
Sbjct: 146 SDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 75/155 (48%), Gaps = 20/155 (12%)
Query: 106 MNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHR------LKI 159
++H +++L G C + ++ E++ G L + +L + RHR L++
Sbjct: 56 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLN--------YLREM--RHRFQTQQLLEM 105
Query: 160 AMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHML 219
++ AM Y+ + + +D+ L ++ V K+SDF S Y+ + E + +S
Sbjct: 106 CKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGS 161
Query: 220 TRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
R+ PE ++ + K+D++ FG+L+ E+ +
Sbjct: 162 KFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 196
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 68/159 (42%), Gaps = 13/159 (8%)
Query: 100 IVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHG-PHLEPLLWRHRLK 158
I +NH N++K G E I L E+ G L DRI G P + + H+L
Sbjct: 56 IXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM 115
Query: 159 IAMEIGNAMAYIH-IGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSH 217
+ Y+H IG I +DIK +L DE + K+SDF + +
Sbjct: 116 A------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 165
Query: 218 MLTRTKRYLAPEYI-LTGLCNEKTDVFCFGMLLLELLTG 255
+ T Y+APE + E DV+ G++L +L G
Sbjct: 166 KMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/177 (18%), Positives = 82/177 (46%), Gaps = 8/177 (4%)
Query: 78 PISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLA 137
P+++ + + S + A +++ ++ +L+G C+ + + L+ + + +G L
Sbjct: 53 PVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLL 111
Query: 138 DRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAK 197
D + H + + ++ L ++I M Y+ R +V +D+ +L K
Sbjct: 112 DYVRE----HKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVK 164
Query: 198 LSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
++DF ++ + E + +++A E IL + ++DV+ +G+ + EL+T
Sbjct: 165 ITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 68/159 (42%), Gaps = 13/159 (8%)
Query: 100 IVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHG-PHLEPLLWRHRLK 158
I +NH N++K G E I L E+ G L DRI G P + + H+L
Sbjct: 55 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM 114
Query: 159 IAMEIGNAMAYIH-IGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSH 217
+ Y+H IG I +DIK +L DE + K+SDF + +
Sbjct: 115 A------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 164
Query: 218 MLTRTKRYLAPEYI-LTGLCNEKTDVFCFGMLLLELLTG 255
+ T Y+APE + E DV+ G++L +L G
Sbjct: 165 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/189 (20%), Positives = 87/189 (46%), Gaps = 16/189 (8%)
Query: 110 NILKLIGCCIETEIPILVFEFVEYGTLAD-----RICSPHGPHLEPLLWRHRLKIAMEIG 164
++++L+G + + ++V E + +G L R + + P P + +++A EI
Sbjct: 82 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 141
Query: 165 NAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKR 224
+ MAY++ + V +++ + K+ DF + I E + + R
Sbjct: 142 DGMAYLNA---KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 198
Query: 225 YLAPEYILTGLCNEKTDVFCFGMLLLELLTGRRDNILLEHVKKHVENNRLGEIV--DPIV 282
++APE + G+ +D++ FG++L E+ + L E + + N ++ + V +
Sbjct: 199 WMAPESLKDGVFTTSSDMWSFGVVLWEITS------LAEQPYQGLSNEQVLKFVMDGGYL 252
Query: 283 VEDKSCPEK 291
+ +CPE+
Sbjct: 253 DQPDNCPER 261
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 68/159 (42%), Gaps = 13/159 (8%)
Query: 100 IVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHG-PHLEPLLWRHRLK 158
I +NH N++K G E I L E+ G L DRI G P + + H+L
Sbjct: 56 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM 115
Query: 159 IAMEIGNAMAYIH-IGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSH 217
+ Y+H IG I +DIK +L DE + K+SDF + +
Sbjct: 116 A------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 165
Query: 218 MLTRTKRYLAPEYI-LTGLCNEKTDVFCFGMLLLELLTG 255
+ T Y+APE + E DV+ G++L +L G
Sbjct: 166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/177 (18%), Positives = 82/177 (46%), Gaps = 8/177 (4%)
Query: 78 PISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLA 137
P+++ + + S + A +++ ++ +L+G C+ + + L+ + + +G L
Sbjct: 46 PVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLL 104
Query: 138 DRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAK 197
D + H + + ++ L ++I M Y+ R +V +D+ +L K
Sbjct: 105 DYVRE----HKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVK 157
Query: 198 LSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
++DF ++ + E + +++A E IL + ++DV+ +G+ + EL+T
Sbjct: 158 ITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 80/199 (40%), Gaps = 15/199 (7%)
Query: 68 KLYKGFLENRP-------ISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIE 120
++Y+G + P ++V + SE E + +++NH+NI++ IG ++
Sbjct: 60 EVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQ 119
Query: 121 TEIPILVFEFVEYGTLAD--RICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPI 178
+ ++ E + G L R P L L +A +I Y+
Sbjct: 120 SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHF 176
Query: 179 VFKDIKLSQILF---DEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGL 235
+ +DI L VAK+ DF + I + +++ PE + G+
Sbjct: 177 IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGI 236
Query: 236 CNEKTDVFCFGMLLLELLT 254
KTD + FG+LL E+ +
Sbjct: 237 FTSKTDTWSFGVLLWEIFS 255
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 67/157 (42%), Gaps = 12/157 (7%)
Query: 107 NHRNILKLIGCCIETEIPILVFEFVEYGTLAD------RICSPHGPHL---EPLLWRHRL 157
H NI+ L+G C +++ E+ YG L + R+ R L
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLL 167
Query: 158 KIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSH 217
+ ++ MA++ + + +D+ +L +VAK+ DF + I ++
Sbjct: 168 HFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG 224
Query: 218 MLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+++APE I + ++DV+ +G+LL E+ +
Sbjct: 225 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 68/159 (42%), Gaps = 13/159 (8%)
Query: 100 IVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHG-PHLEPLLWRHRLK 158
I +NH N++K G E I L E+ G L DRI G P + + H+L
Sbjct: 55 IXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM 114
Query: 159 IAMEIGNAMAYIH-IGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSH 217
+ Y+H IG I +DIK +L DE + K+SDF + +
Sbjct: 115 A------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 164
Query: 218 MLTRTKRYLAPEYI-LTGLCNEKTDVFCFGMLLLELLTG 255
+ T Y+APE + E DV+ G++L +L G
Sbjct: 165 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 68/161 (42%), Gaps = 16/161 (9%)
Query: 107 NHRNILKLIGCCIETEIPILVFEFVEYGTLADR--------ICSPHGPHL-----EPLLW 153
NH NI+ L+G C +++ E+ YG L + ICS P + L
Sbjct: 101 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 160
Query: 154 RHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETH 213
L + ++ MA++ + + +D+ IL + K+ DF + I +
Sbjct: 161 EDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNY 217
Query: 214 VTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
V +++APE I + ++DV+ +G+ L EL +
Sbjct: 218 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 76/178 (42%), Gaps = 19/178 (10%)
Query: 82 MKFGDNYSEN-GENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRI 140
MK + EN + C N + +NH N++K G E I L E+ G L DRI
Sbjct: 41 MKRAVDCPENIKKEICINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI 95
Query: 141 CSPHG-PHLEPLLWRHRLKIAMEIGNAMAYIH-IGFRRPIVFKDIKLSQILFDEYNVAKL 198
G P + + H+L + Y+H IG I +DIK +L DE + K+
Sbjct: 96 EPDIGMPEPDAQRFFHQLMA------GVVYLHGIG----ITHRDIKPENLLLDERDNLKI 145
Query: 199 SDFSESEYIPEGETHVTSHMLTRTKRYLAPEYI-LTGLCNEKTDVFCFGMLLLELLTG 255
SDF + + + T Y+APE + E DV+ G++L +L G
Sbjct: 146 SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 76/178 (42%), Gaps = 19/178 (10%)
Query: 82 MKFGDNYSEN-GENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRI 140
MK + EN + C N + +NH N++K G E I L E+ G L DRI
Sbjct: 40 MKRAVDCPENIKKEICINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI 94
Query: 141 CSPHG-PHLEPLLWRHRLKIAMEIGNAMAYIH-IGFRRPIVFKDIKLSQILFDEYNVAKL 198
G P + + H+L + Y+H IG I +DIK +L DE + K+
Sbjct: 95 EPDIGMPEPDAQRFFHQLMA------GVVYLHGIG----ITHRDIKPENLLLDERDNLKI 144
Query: 199 SDFSESEYIPEGETHVTSHMLTRTKRYLAPEYI-LTGLCNEKTDVFCFGMLLLELLTG 255
SDF + + + T Y+APE + E DV+ G++L +L G
Sbjct: 145 SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 202
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/177 (18%), Positives = 82/177 (46%), Gaps = 8/177 (4%)
Query: 78 PISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLA 137
P+++ + + S + A +++ ++ +L+G C+ + + L+ + + +G L
Sbjct: 47 PVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGXLL 105
Query: 138 DRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAK 197
D + H + + ++ L ++I M Y+ R +V +D+ +L K
Sbjct: 106 DYVRE----HKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVK 158
Query: 198 LSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
++DF ++ + E + +++A E IL + ++DV+ +G+ + EL+T
Sbjct: 159 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 68/159 (42%), Gaps = 13/159 (8%)
Query: 100 IVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHG-PHLEPLLWRHRLK 158
I +NH N++K G E I L E+ G L DRI G P + + H+L
Sbjct: 55 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM 114
Query: 159 IAMEIGNAMAYIH-IGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSH 217
+ Y+H IG I +DIK +L DE + K+SDF + +
Sbjct: 115 A------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 164
Query: 218 MLTRTKRYLAPEYI-LTGLCNEKTDVFCFGMLLLELLTG 255
+ T Y+APE + E DV+ G++L +L G
Sbjct: 165 KMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 68/159 (42%), Gaps = 13/159 (8%)
Query: 100 IVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHG-PHLEPLLWRHRLK 158
I +NH N++K G E I L E+ G L DRI G P + + H+L
Sbjct: 55 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM 114
Query: 159 IAMEIGNAMAYIH-IGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSH 217
+ Y+H IG I +DIK +L DE + K+SDF + +
Sbjct: 115 A------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 164
Query: 218 MLTRTKRYLAPEYI-LTGLCNEKTDVFCFGMLLLELLTG 255
+ T Y+APE + E DV+ G++L +L G
Sbjct: 165 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 68/159 (42%), Gaps = 13/159 (8%)
Query: 100 IVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHG-PHLEPLLWRHRLK 158
I +NH N++K G E I L E+ G L DRI G P + + H+L
Sbjct: 56 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM 115
Query: 159 IAMEIGNAMAYIH-IGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSH 217
+ Y+H IG I +DIK +L DE + K+SDF + +
Sbjct: 116 A------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 165
Query: 218 MLTRTKRYLAPEYI-LTGLCNEKTDVFCFGMLLLELLTG 255
+ T Y+APE + E DV+ G++L +L G
Sbjct: 166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 68/161 (42%), Gaps = 16/161 (9%)
Query: 107 NHRNILKLIGCCIETEIPILVFEFVEYGTLADR--------ICSPHGPHL-----EPLLW 153
NH NI+ L+G C +++ E+ YG L + ICS P + L
Sbjct: 85 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 144
Query: 154 RHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETH 213
L + ++ MA++ + + +D+ IL + K+ DF + I +
Sbjct: 145 EDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNY 201
Query: 214 VTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
V +++APE I + ++DV+ +G+ L EL +
Sbjct: 202 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 68/159 (42%), Gaps = 13/159 (8%)
Query: 100 IVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHG-PHLEPLLWRHRLK 158
I +NH N++K G E I L E+ G L DRI G P + + H+L
Sbjct: 56 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM 115
Query: 159 IAMEIGNAMAYIH-IGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSH 217
+ Y+H IG I +DIK +L DE + K+SDF + +
Sbjct: 116 A------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 165
Query: 218 MLTRTKRYLAPEYI-LTGLCNEKTDVFCFGMLLLELLTG 255
+ T Y+APE + E DV+ G++L +L G
Sbjct: 166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 68/159 (42%), Gaps = 13/159 (8%)
Query: 100 IVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHG-PHLEPLLWRHRLK 158
I +NH N++K G E I L E+ G L DRI G P + + H+L
Sbjct: 56 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM 115
Query: 159 IAMEIGNAMAYIH-IGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSH 217
+ Y+H IG I +DIK +L DE + K+SDF + +
Sbjct: 116 A------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 165
Query: 218 MLTRTKRYLAPEYI-LTGLCNEKTDVFCFGMLLLELLTG 255
+ T Y+APE + E DV+ G++L +L G
Sbjct: 166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 53/110 (48%), Gaps = 3/110 (2%)
Query: 145 GPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSES 204
G + EP+ + + ++ M ++ R + +D+ IL E NV K+ DF +
Sbjct: 190 GFYKEPITMEDLISYSFQVARGMEFLS---SRKCIHRDLAARNILLSENNVVKICDFGLA 246
Query: 205 EYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
I + +V +++APE I + + K+DV+ +G+LL E+ +
Sbjct: 247 RDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 68/159 (42%), Gaps = 13/159 (8%)
Query: 100 IVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHG-PHLEPLLWRHRLK 158
I +NH N++K G E I L E+ G L DRI G P + + H+L
Sbjct: 56 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM 115
Query: 159 IAMEIGNAMAYIH-IGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSH 217
+ Y+H IG I +DIK +L DE + K+SDF + +
Sbjct: 116 A------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 165
Query: 218 MLTRTKRYLAPEYI-LTGLCNEKTDVFCFGMLLLELLTG 255
+ T Y+APE + E DV+ G++L +L G
Sbjct: 166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 68/159 (42%), Gaps = 13/159 (8%)
Query: 100 IVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHG-PHLEPLLWRHRLK 158
I +NH N++K G E I L E+ G L DRI G P + + H+L
Sbjct: 55 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM 114
Query: 159 IAMEIGNAMAYIH-IGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSH 217
+ Y+H IG I +DIK +L DE + K+SDF + +
Sbjct: 115 A------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 164
Query: 218 MLTRTKRYLAPEYI-LTGLCNEKTDVFCFGMLLLELLTG 255
+ T Y+APE + E DV+ G++L +L G
Sbjct: 165 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 69/159 (43%), Gaps = 17/159 (10%)
Query: 107 NHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEP-----------LLWRH 155
+H NI+ L+G C L E+ +G L D + +P L +
Sbjct: 81 HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 140
Query: 156 RLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVT 215
L A ++ M Y+ ++ + +++ IL E VAK++DF S E +V
Sbjct: 141 LLHFAADVARGMDYLS---QKQFIHRNLAARNILVGENYVAKIADFGLSR---GQEVYVK 194
Query: 216 SHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
M R++A E + + +DV+ +G+LL E+++
Sbjct: 195 KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 68/161 (42%), Gaps = 16/161 (9%)
Query: 107 NHRNILKLIGCCIETEIPILVFEFVEYGTLADR--------ICSPHGPHL-----EPLLW 153
NH NI+ L+G C +++ E+ YG L + ICS P + L
Sbjct: 103 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 162
Query: 154 RHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETH 213
L + ++ MA++ + + +D+ IL + K+ DF + I +
Sbjct: 163 EDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNY 219
Query: 214 VTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
V +++APE I + ++DV+ +G+ L EL +
Sbjct: 220 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/177 (18%), Positives = 82/177 (46%), Gaps = 8/177 (4%)
Query: 78 PISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLA 137
P+++ + + S + A +++ ++ +L+G C+ + + L+ + + +G L
Sbjct: 53 PVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLL 111
Query: 138 DRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAK 197
D + H + + ++ L ++I M Y+ R +V +D+ +L K
Sbjct: 112 DYVRE----HKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVK 164
Query: 198 LSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
++DF ++ + E + +++A E IL + ++DV+ +G+ + EL+T
Sbjct: 165 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 68/159 (42%), Gaps = 13/159 (8%)
Query: 100 IVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHG-PHLEPLLWRHRLK 158
I +NH N++K G E I L E+ G L DRI G P + + H+L
Sbjct: 55 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM 114
Query: 159 IAMEIGNAMAYIH-IGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSH 217
+ Y+H IG I +DIK +L DE + K+SDF + +
Sbjct: 115 A------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 164
Query: 218 MLTRTKRYLAPEYI-LTGLCNEKTDVFCFGMLLLELLTG 255
+ T Y+APE + E DV+ G++L +L G
Sbjct: 165 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 24/167 (14%)
Query: 102 FAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAM 161
+AA + RN +K + + E+ E TL D I S + WR +
Sbjct: 68 YAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWR----LFR 123
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFS--------------ESEYI 207
+I A++YIH + I+ +++K I DE K+ DF +S+ +
Sbjct: 124 QILEALSYIH---SQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 208 PEGETHVTSHMLTRTKRYLAPEYIL-TGLCNEKTDVFCFGMLLLELL 253
P ++TS + T Y+A E + TG NEK D + G++ E +
Sbjct: 181 PGSSDNLTSAI--GTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 97/229 (42%), Gaps = 15/229 (6%)
Query: 106 MNHRNILKLIGCCIET--EIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEI 163
+ H NI+K G C L+ E++ YG+L D + H E + L+ +I
Sbjct: 68 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK----HKERIDHIKLLQYTSQI 123
Query: 164 GNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEG-ETHVTSHMLTRT 222
M Y+ G +R + +D+ IL + N K+ DF ++ +P+ E
Sbjct: 124 CKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 180
Query: 223 KRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG-RRDNILLEHVKKHVENNRLGEIVDPI 281
+ APE + + +DV+ FG++L EL T + + + N++ G+++
Sbjct: 181 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 240
Query: 282 VVE----DKSCPEKEXXXXXXXXXIFECVNESAGDRPTMVYAAKQLRQM 326
++E + P + + EC N + RP+ A ++ Q+
Sbjct: 241 LIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 289
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/177 (18%), Positives = 82/177 (46%), Gaps = 8/177 (4%)
Query: 78 PISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLA 137
P+++ + + S + A +++ ++ +L+G C+ + + L+ + + +G L
Sbjct: 50 PVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLL 108
Query: 138 DRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAK 197
D + H + + ++ L ++I M Y+ R +V +D+ +L K
Sbjct: 109 DYVRE----HKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVK 161
Query: 198 LSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
++DF ++ + E + +++A E IL + ++DV+ +G+ + EL+T
Sbjct: 162 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSE-SEYIPEGETHVTSHMLT 220
EI A+ ++H ++ I+++D+K I+ + KL+DF E I +G +H
Sbjct: 129 EISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDG---TVTHTFC 182
Query: 221 RTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
T Y+APE ++ N D + G L+ ++LTG
Sbjct: 183 GTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 107/256 (41%), Gaps = 16/256 (6%)
Query: 79 ISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIET--EIPILVFEFVEYGTL 136
++V K + E+ +F I + H NI+K G C L+ E++ YG+L
Sbjct: 42 VAVKKLQHSTEEHLRDFE-REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 100
Query: 137 ADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVA 196
D + H E + L+ +I M Y+ G +R + +D+ IL + N
Sbjct: 101 RDYLQK----HKERIDHIKLLQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENENRV 153
Query: 197 KLSDFSESEYIPEG-ETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
K+ DF ++ +P+ E + APE + + +DV+ FG++L EL T
Sbjct: 154 KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY 213
Query: 256 -RRDNILLEHVKKHVENNRLGEIVDPIVVE----DKSCPEKEXXXXXXXXXIFECVNESA 310
+ + + N++ G+++ ++E + P + + EC N +
Sbjct: 214 IEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNV 273
Query: 311 GDRPTMVYAAKQLRQM 326
RP+ A ++ Q+
Sbjct: 274 NQRPSFRDLALRVDQI 289
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 68/161 (42%), Gaps = 16/161 (9%)
Query: 107 NHRNILKLIGCCIETEIPILVFEFVEYGTLADR--------ICSPHGPHL-----EPLLW 153
NH NI+ L+G C +++ E+ YG L + ICS P + L
Sbjct: 108 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 167
Query: 154 RHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETH 213
L + ++ MA++ + + +D+ IL + K+ DF + I +
Sbjct: 168 EDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNY 224
Query: 214 VTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
V +++APE I + ++DV+ +G+ L EL +
Sbjct: 225 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/177 (18%), Positives = 82/177 (46%), Gaps = 8/177 (4%)
Query: 78 PISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLA 137
P+++ + + S + A +++ ++ +L+G C+ + + L+ + + +G L
Sbjct: 46 PVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLL 104
Query: 138 DRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAK 197
D + H + + ++ L ++I M Y+ R +V +D+ +L K
Sbjct: 105 DYVRE----HKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVK 157
Query: 198 LSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
++DF ++ + E + +++A E IL + ++DV+ +G+ + EL+T
Sbjct: 158 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 97/229 (42%), Gaps = 15/229 (6%)
Query: 106 MNHRNILKLIGCCIET--EIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEI 163
+ H NI+K G C L+ E++ YG+L D + H E + L+ +I
Sbjct: 86 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK----HKERIDHIKLLQYTSQI 141
Query: 164 GNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEG-ETHVTSHMLTRT 222
M Y+ G +R + +D+ IL + N K+ DF ++ +P+ E
Sbjct: 142 CKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 198
Query: 223 KRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG-RRDNILLEHVKKHVENNRLGEIVDPI 281
+ APE + + +DV+ FG++L EL T + + + N++ G+++
Sbjct: 199 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 258
Query: 282 VVE----DKSCPEKEXXXXXXXXXIFECVNESAGDRPTMVYAAKQLRQM 326
++E + P + + EC N + RP+ A ++ Q+
Sbjct: 259 LIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 307
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 68/159 (42%), Gaps = 13/159 (8%)
Query: 100 IVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHG-PHLEPLLWRHRLK 158
I +NH N++K G E I L E+ G L DRI G P + + H+L
Sbjct: 55 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM 114
Query: 159 IAMEIGNAMAYIH-IGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSH 217
+ Y+H IG I +DIK +L DE + K+SDF + +
Sbjct: 115 A------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 164
Query: 218 MLTRTKRYLAPEYI-LTGLCNEKTDVFCFGMLLLELLTG 255
+ T Y+APE + E DV+ G++L +L G
Sbjct: 165 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/177 (18%), Positives = 82/177 (46%), Gaps = 8/177 (4%)
Query: 78 PISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLA 137
P+++ + + S + A +++ ++ +L+G C+ + + L+ + + +G L
Sbjct: 47 PVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLL 105
Query: 138 DRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAK 197
D + H + + ++ L ++I M Y+ R +V +D+ +L K
Sbjct: 106 DYVRE----HKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVK 158
Query: 198 LSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
++DF ++ + E + +++A E IL + ++DV+ +G+ + EL+T
Sbjct: 159 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/177 (18%), Positives = 82/177 (46%), Gaps = 8/177 (4%)
Query: 78 PISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLA 137
P+++ + + S + A +++ ++ +L+G C+ + + L+ + + +G L
Sbjct: 48 PVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLL 106
Query: 138 DRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAK 197
D + H + + ++ L ++I M Y+ R +V +D+ +L K
Sbjct: 107 DYVRE----HKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVK 159
Query: 198 LSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
++DF ++ + E + +++A E IL + ++DV+ +G+ + EL+T
Sbjct: 160 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 97/229 (42%), Gaps = 15/229 (6%)
Query: 106 MNHRNILKLIGCCIET--EIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEI 163
+ H NI+K G C L+ E++ YG+L D + H E + L+ +I
Sbjct: 86 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK----HKERIDHIKLLQYTSQI 141
Query: 164 GNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEG-ETHVTSHMLTRT 222
M Y+ G +R + +D+ IL + N K+ DF ++ +P+ E
Sbjct: 142 CKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 198
Query: 223 KRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG-RRDNILLEHVKKHVENNRLGEIVDPI 281
+ APE + + +DV+ FG++L EL T + + + N++ G+++
Sbjct: 199 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 258
Query: 282 VVE----DKSCPEKEXXXXXXXXXIFECVNESAGDRPTMVYAAKQLRQM 326
++E + P + + EC N + RP+ A ++ Q+
Sbjct: 259 LIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 307
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSE-SEYIPEGETHVTSHMLT 220
EI A+ ++H ++ I+++D+K I+ + KL+DF E I +G +H
Sbjct: 129 EISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDG---TVTHXFC 182
Query: 221 RTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
T Y+APE ++ N D + G L+ ++LTG
Sbjct: 183 GTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/177 (18%), Positives = 82/177 (46%), Gaps = 8/177 (4%)
Query: 78 PISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLA 137
P+++ + + S + A +++ ++ +L+G C+ + + L+ + + +G L
Sbjct: 49 PVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLL 107
Query: 138 DRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAK 197
D + H + + ++ L ++I M Y+ R +V +D+ +L K
Sbjct: 108 DYVRE----HKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVK 160
Query: 198 LSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
++DF ++ + E + +++A E IL + ++DV+ +G+ + EL+T
Sbjct: 161 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 79/199 (39%), Gaps = 15/199 (7%)
Query: 68 KLYKGFLENRP-------ISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIE 120
++Y+G + P ++V + SE E + ++ NH+NI++ IG ++
Sbjct: 72 EVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ 131
Query: 121 TEIPILVFEFVEYGTLAD--RICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPI 178
+ ++ E + G L R P L L +A +I Y+
Sbjct: 132 SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHF 188
Query: 179 VFKDIKLSQILF---DEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGL 235
+ +DI L VAK+ DF + I + +++ PE + G+
Sbjct: 189 IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGI 248
Query: 236 CNEKTDVFCFGMLLLELLT 254
KTD + FG+LL E+ +
Sbjct: 249 FTSKTDTWSFGVLLWEIFS 267
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 97/229 (42%), Gaps = 15/229 (6%)
Query: 106 MNHRNILKLIGCCIET--EIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEI 163
+ H NI+K G C L+ E++ YG+L D + H E + L+ +I
Sbjct: 71 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK----HKERIDHIKLLQYTSQI 126
Query: 164 GNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEG-ETHVTSHMLTRT 222
M Y+ G +R + +D+ IL + N K+ DF ++ +P+ E
Sbjct: 127 CKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 183
Query: 223 KRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG-RRDNILLEHVKKHVENNRLGEIVDPI 281
+ APE + + +DV+ FG++L EL T + + + N++ G+++
Sbjct: 184 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 243
Query: 282 VVE----DKSCPEKEXXXXXXXXXIFECVNESAGDRPTMVYAAKQLRQM 326
++E + P + + EC N + RP+ A ++ Q+
Sbjct: 244 LIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 292
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 107/256 (41%), Gaps = 16/256 (6%)
Query: 79 ISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIET--EIPILVFEFVEYGTL 136
++V K + E+ +F I + H NI+K G C L+ E++ YG+L
Sbjct: 40 VAVKKLQHSTEEHLRDFE-REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 98
Query: 137 ADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVA 196
D + H E + L+ +I M Y+ G +R + +D+ IL + N
Sbjct: 99 RDYLQK----HKERIDHIKLLQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENENRV 151
Query: 197 KLSDFSESEYIPEG-ETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
K+ DF ++ +P+ E + APE + + +DV+ FG++L EL T
Sbjct: 152 KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY 211
Query: 256 -RRDNILLEHVKKHVENNRLGEIVDPIVVE----DKSCPEKEXXXXXXXXXIFECVNESA 310
+ + + N++ G+++ ++E + P + + EC N +
Sbjct: 212 IEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNV 271
Query: 311 GDRPTMVYAAKQLRQM 326
RP+ A ++ Q+
Sbjct: 272 NQRPSFRDLALRVDQI 287
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 79/199 (39%), Gaps = 15/199 (7%)
Query: 68 KLYKGFLENRP-------ISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIE 120
++Y+G + P ++V + SE E + ++ NH+NI++ IG ++
Sbjct: 52 EVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ 111
Query: 121 TEIPILVFEFVEYGTLAD--RICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPI 178
+ ++ E + G L R P L L +A +I Y+
Sbjct: 112 SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHF 168
Query: 179 VFKDIKLSQILF---DEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGL 235
+ +DI L VAK+ DF + I + +++ PE + G+
Sbjct: 169 IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGI 228
Query: 236 CNEKTDVFCFGMLLLELLT 254
KTD + FG+LL E+ +
Sbjct: 229 FTSKTDTWSFGVLLWEIFS 247
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 107/256 (41%), Gaps = 16/256 (6%)
Query: 79 ISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIET--EIPILVFEFVEYGTL 136
++V K + E+ +F I + H NI+K G C L+ E++ YG+L
Sbjct: 41 VAVKKLQHSTEEHLRDFE-REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 99
Query: 137 ADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVA 196
D + H E + L+ +I M Y+ G +R + +D+ IL + N
Sbjct: 100 RDYLQK----HKERIDHIKLLQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENENRV 152
Query: 197 KLSDFSESEYIPEG-ETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
K+ DF ++ +P+ E + APE + + +DV+ FG++L EL T
Sbjct: 153 KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY 212
Query: 256 -RRDNILLEHVKKHVENNRLGEIVDPIVVE----DKSCPEKEXXXXXXXXXIFECVNESA 310
+ + + N++ G+++ ++E + P + + EC N +
Sbjct: 213 IEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNV 272
Query: 311 GDRPTMVYAAKQLRQM 326
RP+ A ++ Q+
Sbjct: 273 NQRPSFRDLALRVDQI 288
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 97/229 (42%), Gaps = 15/229 (6%)
Query: 106 MNHRNILKLIGCCIET--EIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEI 163
+ H NI+K G C L+ E++ YG+L D + H E + L+ +I
Sbjct: 75 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK----HKERIDHIKLLQYTSQI 130
Query: 164 GNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEG-ETHVTSHMLTRT 222
M Y+ G +R + +D+ IL + N K+ DF ++ +P+ E
Sbjct: 131 CKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 187
Query: 223 KRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG-RRDNILLEHVKKHVENNRLGEIVDPI 281
+ APE + + +DV+ FG++L EL T + + + N++ G+++
Sbjct: 188 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 247
Query: 282 VVE----DKSCPEKEXXXXXXXXXIFECVNESAGDRPTMVYAAKQLRQM 326
++E + P + + EC N + RP+ A ++ Q+
Sbjct: 248 LIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 296
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 98/229 (42%), Gaps = 15/229 (6%)
Query: 106 MNHRNILKLIGCCIET--EIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEI 163
+ H NI+K G C L+ E++ YG+L D + H E + L+ +I
Sbjct: 68 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK----HKERIDHIKLLQYTSQI 123
Query: 164 GNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTK 223
M Y+ G +R + +D+ IL + N K+ DF ++ +P+ + +
Sbjct: 124 CKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESP 180
Query: 224 -RYLAPEYILTGLCNEKTDVFCFGMLLLELLTG-RRDNILLEHVKKHVENNRLGEIVDPI 281
+ APE + + +DV+ FG++L EL T + + + N++ G+++
Sbjct: 181 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 240
Query: 282 VVE----DKSCPEKEXXXXXXXXXIFECVNESAGDRPTMVYAAKQLRQM 326
++E + P + + EC N + RP+ A ++ Q+
Sbjct: 241 LIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 289
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 68/159 (42%), Gaps = 13/159 (8%)
Query: 100 IVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHG-PHLEPLLWRHRLK 158
I +NH N++K G E I L E+ G L DRI G P + + H+L
Sbjct: 56 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM 115
Query: 159 IAMEIGNAMAYIH-IGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSH 217
+ Y+H IG I +DIK +L DE + K+SDF + +
Sbjct: 116 A------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 165
Query: 218 MLTRTKRYLAPEYI-LTGLCNEKTDVFCFGMLLLELLTG 255
+ T Y+APE + E DV+ G++L +L G
Sbjct: 166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 97/229 (42%), Gaps = 15/229 (6%)
Query: 106 MNHRNILKLIGCCIET--EIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEI 163
+ H NI+K G C L+ E++ YG+L D + H E + L+ +I
Sbjct: 73 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK----HKERIDHIKLLQYTSQI 128
Query: 164 GNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEG-ETHVTSHMLTRT 222
M Y+ G +R + +D+ IL + N K+ DF ++ +P+ E
Sbjct: 129 CKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 185
Query: 223 KRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG-RRDNILLEHVKKHVENNRLGEIVDPI 281
+ APE + + +DV+ FG++L EL T + + + N++ G+++
Sbjct: 186 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 245
Query: 282 VVE----DKSCPEKEXXXXXXXXXIFECVNESAGDRPTMVYAAKQLRQM 326
++E + P + + EC N + RP+ A ++ Q+
Sbjct: 246 LIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 294
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 97/229 (42%), Gaps = 15/229 (6%)
Query: 106 MNHRNILKLIGCCIET--EIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEI 163
+ H NI+K G C L+ E++ YG+L D + H E + L+ +I
Sbjct: 74 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK----HKERIDHIKLLQYTSQI 129
Query: 164 GNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEG-ETHVTSHMLTRT 222
M Y+ G +R + +D+ IL + N K+ DF ++ +P+ E
Sbjct: 130 CKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 186
Query: 223 KRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG-RRDNILLEHVKKHVENNRLGEIVDPI 281
+ APE + + +DV+ FG++L EL T + + + N++ G+++
Sbjct: 187 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 246
Query: 282 VVE----DKSCPEKEXXXXXXXXXIFECVNESAGDRPTMVYAAKQLRQM 326
++E + P + + EC N + RP+ A ++ Q+
Sbjct: 247 LIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 295
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 107/256 (41%), Gaps = 16/256 (6%)
Query: 79 ISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIET--EIPILVFEFVEYGTL 136
++V K + E+ +F I + H NI+K G C L+ E++ YG+L
Sbjct: 46 VAVKKLQHSTEEHLRDFE-REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 104
Query: 137 ADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVA 196
D + H E + L+ +I M Y+ G +R + +D+ IL + N
Sbjct: 105 RDYLQK----HKERIDHIKLLQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENENRV 157
Query: 197 KLSDFSESEYIPEG-ETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
K+ DF ++ +P+ E + APE + + +DV+ FG++L EL T
Sbjct: 158 KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY 217
Query: 256 -RRDNILLEHVKKHVENNRLGEIVDPIVVE----DKSCPEKEXXXXXXXXXIFECVNESA 310
+ + + N++ G+++ ++E + P + + EC N +
Sbjct: 218 IEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNV 277
Query: 311 GDRPTMVYAAKQLRQM 326
RP+ A ++ Q+
Sbjct: 278 NQRPSFRDLALRVDQI 293
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 79/199 (39%), Gaps = 15/199 (7%)
Query: 68 KLYKGFLENRP-------ISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIE 120
++Y+G + P ++V + SE E + ++ NH+NI++ IG ++
Sbjct: 45 EVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ 104
Query: 121 TEIPILVFEFVEYGTLAD--RICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPI 178
+ ++ E + G L R P L L +A +I Y+
Sbjct: 105 SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHF 161
Query: 179 VFKDIKLSQILF---DEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGL 235
+ +DI L VAK+ DF + I + +++ PE + G+
Sbjct: 162 IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGI 221
Query: 236 CNEKTDVFCFGMLLLELLT 254
KTD + FG+LL E+ +
Sbjct: 222 FTSKTDTWSFGVLLWEIFS 240
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 97/229 (42%), Gaps = 15/229 (6%)
Query: 106 MNHRNILKLIGCCIET--EIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEI 163
+ H NI+K G C L+ E++ YG+L D + H E + L+ +I
Sbjct: 99 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK----HKERIDHIKLLQYTSQI 154
Query: 164 GNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEG-ETHVTSHMLTRT 222
M Y+ G +R + +D+ IL + N K+ DF ++ +P+ E
Sbjct: 155 CKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 211
Query: 223 KRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG-RRDNILLEHVKKHVENNRLGEIVDPI 281
+ APE + + +DV+ FG++L EL T + + + N++ G+++
Sbjct: 212 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 271
Query: 282 VVE----DKSCPEKEXXXXXXXXXIFECVNESAGDRPTMVYAAKQLRQM 326
++E + P + + EC N + RP+ A ++ Q+
Sbjct: 272 LIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 320
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 79/199 (39%), Gaps = 15/199 (7%)
Query: 68 KLYKGFLENRP-------ISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIE 120
++Y+G + P ++V + SE E + ++ NH+NI++ IG ++
Sbjct: 46 EVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ 105
Query: 121 TEIPILVFEFVEYGTLAD--RICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPI 178
+ ++ E + G L R P L L +A +I Y+
Sbjct: 106 SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHF 162
Query: 179 VFKDIKLSQILF---DEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGL 235
+ +DI L VAK+ DF + I + +++ PE + G+
Sbjct: 163 IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGI 222
Query: 236 CNEKTDVFCFGMLLLELLT 254
KTD + FG+LL E+ +
Sbjct: 223 FTSKTDTWSFGVLLWEIFS 241
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 79/199 (39%), Gaps = 15/199 (7%)
Query: 68 KLYKGFLENRP-------ISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIE 120
++Y+G + P ++V + SE E + ++ NH+NI++ IG ++
Sbjct: 45 EVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ 104
Query: 121 TEIPILVFEFVEYGTLAD--RICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPI 178
+ ++ E + G L R P L L +A +I Y+
Sbjct: 105 SLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHF 161
Query: 179 VFKDIKLSQILF---DEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGL 235
+ +DI L VAK+ DF + I + +++ PE + G+
Sbjct: 162 IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGI 221
Query: 236 CNEKTDVFCFGMLLLELLT 254
KTD + FG+LL E+ +
Sbjct: 222 FTSKTDTWSFGVLLWEIFS 240
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 79/199 (39%), Gaps = 15/199 (7%)
Query: 68 KLYKGFLENRP-------ISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIE 120
++Y+G + P ++V + SE E + ++ NH+NI++ IG ++
Sbjct: 62 EVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ 121
Query: 121 TEIPILVFEFVEYGTLAD--RICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPI 178
+ ++ E + G L R P L L +A +I Y+
Sbjct: 122 SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHF 178
Query: 179 VFKDIKLSQILF---DEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGL 235
+ +DI L VAK+ DF + I + +++ PE + G+
Sbjct: 179 IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGI 238
Query: 236 CNEKTDVFCFGMLLLELLT 254
KTD + FG+LL E+ +
Sbjct: 239 FTSKTDTWSFGVLLWEIFS 257
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 79/199 (39%), Gaps = 15/199 (7%)
Query: 68 KLYKGFLENRP-------ISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIE 120
++Y+G + P ++V + SE E + ++ NH+NI++ IG ++
Sbjct: 37 EVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ 96
Query: 121 TEIPILVFEFVEYGTLAD--RICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPI 178
+ ++ E + G L R P L L +A +I Y+
Sbjct: 97 SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHF 153
Query: 179 VFKDIKLSQILF---DEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGL 235
+ +DI L VAK+ DF + I + +++ PE + G+
Sbjct: 154 IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGI 213
Query: 236 CNEKTDVFCFGMLLLELLT 254
KTD + FG+LL E+ +
Sbjct: 214 FTSKTDTWSFGVLLWEIFS 232
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 7/98 (7%)
Query: 160 AMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSE-SEYIPEGETHVTSHM 218
EI +A+ Y+H R +V++DIKL ++ D+ K++DF E I +G T T
Sbjct: 111 GAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--- 164
Query: 219 LTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTGR 256
T YLAPE + D + G+++ E++ GR
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 16/155 (10%)
Query: 104 AQMNHRNILKLIGCCIETEIPI-LVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAM- 161
A +NH ++KL +TE + L+ +F+ G L R+ E + +K +
Sbjct: 85 ADVNHPFVVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSK------EVMFTEEDVKFYLA 137
Query: 162 EIGNAMAYIH-IGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLT 220
E+ + ++H +G I+++D+K IL DE KL+DF S+ + E S
Sbjct: 138 ELALGLDHLHSLG----IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYS--FC 191
Query: 221 RTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
T Y+APE + + D + +G+L+ E+LTG
Sbjct: 192 GTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 160 AMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSE-SEYIPEGETHVTSHM 218
A EI +A+ Y+H IV++D+K IL D L+DF E I E + T+
Sbjct: 145 AAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENI---EHNSTTST 198
Query: 219 LTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
T YLAPE + + D +C G +L E+L G
Sbjct: 199 FCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYG 235
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/177 (18%), Positives = 82/177 (46%), Gaps = 8/177 (4%)
Query: 78 PISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLA 137
P+++ + + S + A +++ ++ +L+G C+ + + L+ + + +G L
Sbjct: 53 PVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLL 111
Query: 138 DRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAK 197
D + H + + ++ L ++I M Y+ R +V +D+ +L K
Sbjct: 112 DYVRE----HKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVK 164
Query: 198 LSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
++DF ++ + E + +++A E IL + ++DV+ +G+ + EL+T
Sbjct: 165 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/177 (18%), Positives = 82/177 (46%), Gaps = 8/177 (4%)
Query: 78 PISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLA 137
P+++ + + S + A +++ ++ +L+G C+ + + L+ + + +G L
Sbjct: 46 PVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGXLL 104
Query: 138 DRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAK 197
D + H + + ++ L ++I M Y+ R +V +D+ +L K
Sbjct: 105 DYVRE----HKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVK 157
Query: 198 LSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
++DF ++ + E + +++A E IL + ++DV+ +G+ + EL+T
Sbjct: 158 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 76/177 (42%), Gaps = 10/177 (5%)
Query: 79 ISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLAD 138
I +K G Y+E Q +H NI++L G +++ ++V E +E G+L D
Sbjct: 78 IKTLKVG--YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSL-D 134
Query: 139 RICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKL 198
H + + + I + M Y+ V +D+ IL + V K+
Sbjct: 135 SFLRKHDAQFTVI---QLVGMLRGIASGMKYLS---DMGAVHRDLAARNILINSNLVCKV 188
Query: 199 SDFSESEYIPEG-ETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
SDF S + + E T+ R+ +PE I +DV+ +G++L E+++
Sbjct: 189 SDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 79/199 (39%), Gaps = 15/199 (7%)
Query: 68 KLYKGFLENRP-------ISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIE 120
++Y+G + P ++V + SE E + ++ NH+NI++ IG ++
Sbjct: 60 EVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ 119
Query: 121 TEIPILVFEFVEYGTLAD--RICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPI 178
+ ++ E + G L R P L L +A +I Y+
Sbjct: 120 SLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHF 176
Query: 179 VFKDIKLSQILF---DEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGL 235
+ +DI L VAK+ DF + I + +++ PE + G+
Sbjct: 177 IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGI 236
Query: 236 CNEKTDVFCFGMLLLELLT 254
KTD + FG+LL E+ +
Sbjct: 237 FTSKTDTWSFGVLLWEIFS 255
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 7/96 (7%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSE-SEYIPEGETHVTSHMLT 220
EI +A+ Y+H R +V++DIKL ++ D+ K++DF E I +G T T
Sbjct: 113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT---FC 166
Query: 221 RTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTGR 256
T YLAPE + D + G+++ E++ GR
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/177 (18%), Positives = 82/177 (46%), Gaps = 8/177 (4%)
Query: 78 PISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLA 137
P+++ + + S + A +++ ++ +L+G C+ + + L+ + + +G L
Sbjct: 56 PVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLL 114
Query: 138 DRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAK 197
D + H + + ++ L ++I M Y+ R +V +D+ +L K
Sbjct: 115 DYVRE----HKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVK 167
Query: 198 LSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
++DF ++ + E + +++A E IL + ++DV+ +G+ + EL+T
Sbjct: 168 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 12/149 (8%)
Query: 108 HRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAM 167
H +I+KL +V E+V G L D IC L + ++ +I + +
Sbjct: 75 HPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGR-----LDEKESRRLFQQILSGV 129
Query: 168 AYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLA 227
Y H R +V +D+K +L D + AK++DF S + +GE S + Y A
Sbjct: 130 DYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXS---CGSPNYAA 183
Query: 228 PEYILTGL-CNEKTDVFCFGMLLLELLTG 255
PE I L + D++ G++L LL G
Sbjct: 184 PEVISGRLYAGPEVDIWSSGVILYALLCG 212
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/177 (18%), Positives = 82/177 (46%), Gaps = 8/177 (4%)
Query: 78 PISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLA 137
P+++ + + S + A +++ ++ +L+G C+ + + L+ + + +G L
Sbjct: 46 PVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLL 104
Query: 138 DRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAK 197
D + H + + ++ L ++I M Y+ R +V +D+ +L K
Sbjct: 105 DYVRE----HKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVK 157
Query: 198 LSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
++DF ++ + E + +++A E IL + ++DV+ +G+ + EL+T
Sbjct: 158 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/177 (18%), Positives = 82/177 (46%), Gaps = 8/177 (4%)
Query: 78 PISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLA 137
P+++ + + S + A +++ ++ +L+G C+ + + L+ + + +G L
Sbjct: 48 PVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLL 106
Query: 138 DRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAK 197
D + H + + ++ L ++I M Y+ R +V +D+ +L K
Sbjct: 107 DYVRE----HKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVK 159
Query: 198 LSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
++DF ++ + E + +++A E IL + ++DV+ +G+ + EL+T
Sbjct: 160 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/177 (18%), Positives = 82/177 (46%), Gaps = 8/177 (4%)
Query: 78 PISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLA 137
P+++ + + S + A +++ ++ +L+G C+ + + L+ + + +G L
Sbjct: 52 PVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLL 110
Query: 138 DRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAK 197
D + H + + ++ L ++I M Y+ R +V +D+ +L K
Sbjct: 111 DYVRE----HKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVK 163
Query: 198 LSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
++DF ++ + E + +++A E IL + ++DV+ +G+ + EL+T
Sbjct: 164 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 7/96 (7%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSE-SEYIPEGETHVTSHMLT 220
EI +A+ Y+H R +V++DIKL ++ D+ K++DF E I +G T T
Sbjct: 116 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT---FC 169
Query: 221 RTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTGR 256
T YLAPE + D + G+++ E++ GR
Sbjct: 170 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 75/180 (41%), Gaps = 16/180 (8%)
Query: 79 ISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLAD 138
I +K G + + C +I+ Q +H N++ L G + ++V EF+E G L D
Sbjct: 76 IKTLKVGYTEKQRRDFLCEASIM--GQFDHPNVVHLEGVVTRGKPVMIVIEFMENGAL-D 132
Query: 139 RICSPHGPHLEPLLWRHRLK---IAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNV 195
H + L+ M M Y+H +D+ IL + V
Sbjct: 133 AFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMGYVH---------RDLAARNILVNSNLV 183
Query: 196 AKLSDFSESEYIPEGETHVTSHMLTRTK-RYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
K+SDF S I + V + + R+ APE I +DV+ +G+++ E+++
Sbjct: 184 CKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 243
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/177 (18%), Positives = 82/177 (46%), Gaps = 8/177 (4%)
Query: 78 PISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLA 137
P+++ + + S + A +++ ++ +L+G C+ + + L+ + + +G L
Sbjct: 49 PVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLL 107
Query: 138 DRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAK 197
D + H + + ++ L ++I M Y+ R +V +D+ +L K
Sbjct: 108 DYVRE----HKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVK 160
Query: 198 LSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
++DF ++ + E + +++A E IL + ++DV+ +G+ + EL+T
Sbjct: 161 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/177 (18%), Positives = 82/177 (46%), Gaps = 8/177 (4%)
Query: 78 PISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLA 137
P+++ + + S + A +++ ++ +L+G C+ + + L+ + + +G L
Sbjct: 53 PVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLL 111
Query: 138 DRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAK 197
D + H + + ++ L ++I M Y+ R +V +D+ +L K
Sbjct: 112 DYVRE----HKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVK 164
Query: 198 LSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
++DF ++ + E + +++A E IL + ++DV+ +G+ + EL+T
Sbjct: 165 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/177 (18%), Positives = 82/177 (46%), Gaps = 8/177 (4%)
Query: 78 PISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLA 137
P+++ + + S + A +++ ++ +L+G C+ + + L+ + + +G L
Sbjct: 49 PVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLL 107
Query: 138 DRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAK 197
D + H + + ++ L ++I M Y+ R +V +D+ +L K
Sbjct: 108 DYVRE----HKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVK 160
Query: 198 LSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
++DF ++ + E + +++A E IL + ++DV+ +G+ + EL+T
Sbjct: 161 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/177 (18%), Positives = 82/177 (46%), Gaps = 8/177 (4%)
Query: 78 PISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLA 137
P+++ + + S + A +++ ++ +L+G C+ + + L+ + + +G L
Sbjct: 46 PVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLL 104
Query: 138 DRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAK 197
D + H + + ++ L ++I M Y+ R +V +D+ +L K
Sbjct: 105 DYVRE----HKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVK 157
Query: 198 LSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
++DF ++ + E + +++A E IL + ++DV+ +G+ + EL+T
Sbjct: 158 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/177 (18%), Positives = 82/177 (46%), Gaps = 8/177 (4%)
Query: 78 PISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLA 137
P+++ + + S + A +++ ++ +L+G C+ + + L+ + + +G L
Sbjct: 40 PVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLL 98
Query: 138 DRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAK 197
D + H + + ++ L ++I M Y+ R +V +D+ +L K
Sbjct: 99 DYVRE----HKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVK 151
Query: 198 LSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
++DF ++ + E + +++A E IL + ++DV+ +G+ + EL+T
Sbjct: 152 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 79/199 (39%), Gaps = 15/199 (7%)
Query: 68 KLYKGFLENRP-------ISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIE 120
++Y+G + P ++V + SE E + ++ NH+NI++ IG ++
Sbjct: 63 EVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ 122
Query: 121 TEIPILVFEFVEYGTLAD--RICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPI 178
+ ++ E + G L R P L L +A +I Y+
Sbjct: 123 SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHF 179
Query: 179 VFKDIKLSQILF---DEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGL 235
+ +DI L VAK+ DF + I + +++ PE + G+
Sbjct: 180 IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGI 239
Query: 236 CNEKTDVFCFGMLLLELLT 254
KTD + FG+LL E+ +
Sbjct: 240 FTSKTDTWSFGVLLWEIFS 258
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 73/151 (48%), Gaps = 10/151 (6%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIG 164
Q+++ I+++IG C E E +LV E E G L + H++ ++ +++ ++
Sbjct: 62 QLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD---KNIIELVHQVS 115
Query: 165 NAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTK- 223
M Y+ V +D+ +L + AK+SDF S+ + E + + +
Sbjct: 116 MGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 172
Query: 224 RYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
++ APE I + K+DV+ FG+L+ E +
Sbjct: 173 KWYAPECINYYKFSSKSDVWSFGVLMWEAFS 203
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/177 (18%), Positives = 82/177 (46%), Gaps = 8/177 (4%)
Query: 78 PISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLA 137
P+++ + + S + A +++ ++ +L+G C+ + + L+ + + +G L
Sbjct: 49 PVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLL 107
Query: 138 DRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAK 197
D + H + + ++ L ++I M Y+ R +V +D+ +L K
Sbjct: 108 DYVRE----HKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVK 160
Query: 198 LSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
++DF ++ + E + +++A E IL + ++DV+ +G+ + EL+T
Sbjct: 161 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/177 (18%), Positives = 82/177 (46%), Gaps = 8/177 (4%)
Query: 78 PISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLA 137
P+++ + + S + A +++ ++ +L+G C+ + + L+ + + +G L
Sbjct: 46 PVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLL 104
Query: 138 DRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAK 197
D + H + + ++ L ++I M Y+ R +V +D+ +L K
Sbjct: 105 DYVRE----HKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVK 157
Query: 198 LSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
++DF ++ + E + +++A E IL + ++DV+ +G+ + EL+T
Sbjct: 158 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/177 (18%), Positives = 82/177 (46%), Gaps = 8/177 (4%)
Query: 78 PISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLA 137
P+++ + + S + A +++ ++ +L+G C+ + + L+ + + +G L
Sbjct: 71 PVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLL 129
Query: 138 DRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAK 197
D + H + + ++ L ++I M Y+ R +V +D+ +L K
Sbjct: 130 DYVRE----HKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVK 182
Query: 198 LSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
++DF ++ + E + +++A E IL + ++DV+ +G+ + EL+T
Sbjct: 183 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 73/151 (48%), Gaps = 10/151 (6%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIG 164
Q+++ I+++IG C E E +LV E E G L + H++ ++ +++ ++
Sbjct: 64 QLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD---KNIIELVHQVS 117
Query: 165 NAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTK- 223
M Y+ V +D+ +L + AK+SDF S+ + E + + +
Sbjct: 118 MGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 174
Query: 224 RYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
++ APE I + K+DV+ FG+L+ E +
Sbjct: 175 KWYAPECINYYKFSSKSDVWSFGVLMWEAFS 205
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 73/151 (48%), Gaps = 10/151 (6%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIG 164
Q+++ I+++IG C E E +LV E E G L + H++ ++ +++ ++
Sbjct: 68 QLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD---KNIIELVHQVS 121
Query: 165 NAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTK- 223
M Y+ V +D+ +L + AK+SDF S+ + E + + +
Sbjct: 122 MGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 178
Query: 224 RYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
++ APE I + K+DV+ FG+L+ E +
Sbjct: 179 KWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/177 (18%), Positives = 82/177 (46%), Gaps = 8/177 (4%)
Query: 78 PISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLA 137
P+++ + + S + A +++ ++ +L+G C+ + + L+ + + +G L
Sbjct: 43 PVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLL 101
Query: 138 DRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAK 197
D + H + + ++ L ++I M Y+ R +V +D+ +L K
Sbjct: 102 DYVRE----HKDNIGSQYLLNWCVQIAEGMNYLE---DRRLVHRDLAARNVLVKTPQHVK 154
Query: 198 LSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
++DF ++ + E + +++A E IL + ++DV+ +G+ + EL+T
Sbjct: 155 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 79/199 (39%), Gaps = 15/199 (7%)
Query: 68 KLYKGFLENRP-------ISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIE 120
++Y+G + P ++V + SE E + ++ NH+NI++ IG ++
Sbjct: 86 EVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ 145
Query: 121 TEIPILVFEFVEYGTLAD--RICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPI 178
+ ++ E + G L R P L L +A +I Y+
Sbjct: 146 SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHF 202
Query: 179 VFKDIKLSQILF---DEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGL 235
+ +DI L VAK+ DF + I + +++ PE + G+
Sbjct: 203 IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGI 262
Query: 236 CNEKTDVFCFGMLLLELLT 254
KTD + FG+LL E+ +
Sbjct: 263 FTSKTDTWSFGVLLWEIFS 281
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 107/256 (41%), Gaps = 16/256 (6%)
Query: 79 ISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIET--EIPILVFEFVEYGTL 136
++V K + E+ +F I + H NI+K G C L+ EF+ YG+L
Sbjct: 45 VAVKKLQHSTEEHLRDFE-REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSL 103
Query: 137 ADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVA 196
+ + H E + L+ +I M Y+ G +R + +D+ IL + N
Sbjct: 104 REYLQK----HKERIDHIKLLQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENENRV 156
Query: 197 KLSDFSESEYIPEG-ETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
K+ DF ++ +P+ E + APE + + +DV+ FG++L EL T
Sbjct: 157 KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY 216
Query: 256 -RRDNILLEHVKKHVENNRLGEIVDPIVVE----DKSCPEKEXXXXXXXXXIFECVNESA 310
+ + + N++ G+++ ++E + P + + EC N +
Sbjct: 217 IEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNV 276
Query: 311 GDRPTMVYAAKQLRQM 326
RP+ A ++ Q+
Sbjct: 277 NQRPSFRDLALRVDQI 292
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 9/134 (6%)
Query: 120 ETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIV 179
+T+ + EF + GTL I G L+ +L L++ +I + YIH + ++
Sbjct: 105 KTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVL---ALELFEQITKGVDYIH---SKKLI 158
Query: 180 FKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEK 239
+D+K S I + K+ DF + S T RY++PE I + ++
Sbjct: 159 HRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTRSKG---TLRYMSPEQISSQDYGKE 215
Query: 240 TDVFCFGMLLLELL 253
D++ G++L ELL
Sbjct: 216 VDLYALGLILAELL 229
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 99/229 (43%), Gaps = 15/229 (6%)
Query: 106 MNHRNILKLIGCCIET--EIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEI 163
+ H NI+K G C L+ E++ YG+L D + H E + L+ +I
Sbjct: 69 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK----HKERIDHIKLLQYTSQI 124
Query: 164 GNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTK 223
M Y+ G +R + +++ IL + N K+ DF ++ +P+ + + +
Sbjct: 125 CKGMEYL--GTKR-YIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESP 181
Query: 224 -RYLAPEYILTGLCNEKTDVFCFGMLLLELLTG-RRDNILLEHVKKHVENNRLGEIVDPI 281
+ APE + + +DV+ FG++L EL T + + + N++ G+++
Sbjct: 182 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 241
Query: 282 VVE----DKSCPEKEXXXXXXXXXIFECVNESAGDRPTMVYAAKQLRQM 326
++E + P + + EC N + RP+ A ++ Q+
Sbjct: 242 LIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 290
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 73/151 (48%), Gaps = 10/151 (6%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIG 164
Q+++ I+++IG C E E +LV E E G L + H++ ++ +++ ++
Sbjct: 74 QLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD---KNIIELVHQVS 127
Query: 165 NAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTK- 223
M Y+ V +D+ +L + AK+SDF S+ + E + + +
Sbjct: 128 MGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 184
Query: 224 RYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
++ APE I + K+DV+ FG+L+ E +
Sbjct: 185 KWYAPECINYYKFSSKSDVWSFGVLMWEAFS 215
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 7/96 (7%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSE-SEYIPEGETHVTSHMLT 220
EI +A+ Y+H R +V++DIKL ++ D+ K++DF E I +G T
Sbjct: 118 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG---ATMKXFC 171
Query: 221 RTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTGR 256
T YLAPE + D + G+++ E++ GR
Sbjct: 172 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 73/151 (48%), Gaps = 10/151 (6%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIG 164
Q+++ I+++IG C E E +LV E E G L + H++ ++ +++ ++
Sbjct: 82 QLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD---KNIIELVHQVS 135
Query: 165 NAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTK- 223
M Y+ V +D+ +L + AK+SDF S+ + E + + +
Sbjct: 136 MGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 192
Query: 224 RYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
++ APE I + K+DV+ FG+L+ E +
Sbjct: 193 KWYAPECINYYKFSSKSDVWSFGVLMWEAFS 223
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 73/151 (48%), Gaps = 10/151 (6%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIG 164
Q+++ I+++IG C E E +LV E E G L + H++ ++ +++ ++
Sbjct: 84 QLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD---KNIIELVHQVS 137
Query: 165 NAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTK- 223
M Y+ V +D+ +L + AK+SDF S+ + E + + +
Sbjct: 138 MGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 194
Query: 224 RYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
++ APE I + K+DV+ FG+L+ E +
Sbjct: 195 KWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 73/151 (48%), Gaps = 10/151 (6%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIG 164
Q+++ I+++IG C E E +LV E E G L + H++ ++ +++ ++
Sbjct: 84 QLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD---KNIIELVHQVS 137
Query: 165 NAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTK- 223
M Y+ V +D+ +L + AK+SDF S+ + E + + +
Sbjct: 138 MGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 194
Query: 224 RYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
++ APE I + K+DV+ FG+L+ E +
Sbjct: 195 KWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 7/96 (7%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSE-SEYIPEGETHVTSHMLT 220
EI +A+ Y+H R +V++DIKL ++ D+ K++DF E I +G T
Sbjct: 113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG---ATMKXFC 166
Query: 221 RTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTGR 256
T YLAPE + D + G+++ E++ GR
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 12/117 (10%)
Query: 160 AMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHML 219
A EI + +H R IV++D+K IL D++ ++SD + ++PEG+T
Sbjct: 292 AAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGR--- 345
Query: 220 TRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG------RRDNILLEHVKKHVE 270
T Y+APE + D + G LL E++ G R+ I E V++ V+
Sbjct: 346 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVK 402
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 76/182 (41%), Gaps = 16/182 (8%)
Query: 79 ISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVF-EFVEYGTLA 137
+++ Y+E + Q H NI++L G + +P+++ EF+E G L
Sbjct: 47 VAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEG-VVTNSMPVMILTEFMENGALD 105
Query: 138 D--RICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNV 195
R+ ++ + + M M+Y+H +D+ IL + V
Sbjct: 106 SFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSYVH---------RDLAARNILVNSNLV 156
Query: 196 AKLSDFSESEYIPEGETHVTSHMLTRTK---RYLAPEYILTGLCNEKTDVFCFGMLLLEL 252
K+SDF S ++ E + T K R+ APE I +D + +G+++ E+
Sbjct: 157 CKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEV 216
Query: 253 LT 254
++
Sbjct: 217 MS 218
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 70/163 (42%), Gaps = 17/163 (10%)
Query: 100 IVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKI 159
I +Q + + K G ++ ++ E++ G+ D + + GP E +I
Sbjct: 72 ITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRA--GPFDE-------FQI 122
Query: 160 AM---EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTS 216
A EI + Y+H + +DIK + +L E KL+DF + + + T +
Sbjct: 123 ATMLKEILKGLDYLH---SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTD--TQIKR 177
Query: 217 HMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTGRRDN 259
+ T ++APE I + K D++ G+ +EL G N
Sbjct: 178 NTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPN 220
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 91/236 (38%), Gaps = 37/236 (15%)
Query: 45 SAGELKIATNNYNGHQVIASEHY-KLYKGFLENRPISVMKFGDNYSENGENFCF-NNIVF 102
+A E + +N ++I Y +YKG L+ RP++V F N +NF NI
Sbjct: 4 AASEPSLDLDNLKLLELIGRGRYGAVYKGSLDERPVAVKVFS---FANRQNFINEKNIYR 60
Query: 103 AAQMNHRNILKLIGCCIETEIP-----ILVFEFVEYGTLADRICSPHGPHLEPLLWRHRL 157
M H NI + I +LV E+ G+L + L W
Sbjct: 61 VPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLS------LHTSDWVSSC 114
Query: 158 KIAMEIGNAMAYIHIGFRR------PIVFKDIKLSQILFDEYNVAKLSDFSES------E 205
++A + +AY+H R I +D+ +L +SDF S
Sbjct: 115 RLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNR 174
Query: 206 YIPEGETHVTSHMLTRTKRYLAPEYILTGLCN--------EKTDVFCFGMLLLELL 253
+ GE + T RY+APE +L G N ++ D++ G++ E+
Sbjct: 175 LVRPGEEDNAAISEVGTIRYMAPE-VLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 7/98 (7%)
Query: 160 AMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSE-SEYIPEGETHVTSHM 218
EI +A+ Y+H R +V++DIKL ++ D+ K++DF E I +G T
Sbjct: 111 GAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG---ATMKX 164
Query: 219 LTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTGR 256
T YLAPE + D + G+++ E++ GR
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 12/117 (10%)
Query: 160 AMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHML 219
A EI + +H R IV++D+K IL D++ ++SD + ++PEG+T
Sbjct: 292 AAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGR--- 345
Query: 220 TRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG------RRDNILLEHVKKHVE 270
T Y+APE + D + G LL E++ G R+ I E V++ V+
Sbjct: 346 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVK 402
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/181 (20%), Positives = 77/181 (42%), Gaps = 14/181 (7%)
Query: 79 ISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLAD 138
+++ Y+E + Q +H N++ L G ++ +++ EF+E G+L
Sbjct: 64 VAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDS 123
Query: 139 RICSPHGPH--LEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVA 196
+ G ++ + + M+ M Y+H +D+ IL + V
Sbjct: 124 FLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVH---------RDLAARNILVNSNLVC 174
Query: 197 KLSDFSESEYIPEGETHVTSHMLTRTK---RYLAPEYILTGLCNEKTDVFCFGMLLLELL 253
K+SDF S ++ + + T K R+ APE I +DV+ +G+++ E++
Sbjct: 175 KVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVM 234
Query: 254 T 254
+
Sbjct: 235 S 235
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 7/96 (7%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSE-SEYIPEGETHVTSHMLT 220
EI +A+ Y+H R +V++DIKL ++ D+ K++DF E I +G T
Sbjct: 113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG---ATMKXFC 166
Query: 221 RTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTGR 256
T YLAPE + D + G+++ E++ GR
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 73/174 (41%), Gaps = 19/174 (10%)
Query: 86 DNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHG 145
D + FN +V H N++++ + + +V EF+E G L D +
Sbjct: 108 DLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR- 166
Query: 146 PHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFS--- 202
+ + + + A++ +H + ++ +DIK IL KLSDF
Sbjct: 167 -----MNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCA 218
Query: 203 -ESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
S+ +P + L T ++APE I + D++ G++++E++ G
Sbjct: 219 QVSKEVPRRKX------LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 266
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 68/158 (43%), Gaps = 11/158 (6%)
Query: 98 NNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRL 157
I +Q + + K G ++ ++ E++ G+ D + P PL
Sbjct: 69 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPG-----PLDETQIA 122
Query: 158 KIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSH 217
I EI + Y+H + + +DIK + +L E+ KL+DF + + +T + +
Sbjct: 123 TILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQIKRN 177
Query: 218 MLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
T ++APE I + K D++ G+ +EL G
Sbjct: 178 XFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARG 215
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 75/174 (43%), Gaps = 19/174 (10%)
Query: 86 DNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHG 145
D + FN +V H N++++ + + +V EF+E G L D + H
Sbjct: 63 DLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVT--HT 120
Query: 146 PHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDF---- 201
E + + + + A++ +H + ++ +DIK IL KLSDF
Sbjct: 121 RMNEEQI----AAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCA 173
Query: 202 SESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
S+ +P + L T ++APE I + D++ G++++E++ G
Sbjct: 174 QVSKEVPRRKX------LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 221
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 77/181 (42%), Gaps = 20/181 (11%)
Query: 79 ISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLAD 138
++V K D + FN +V H N++++ + + +V EF+E G L D
Sbjct: 179 VAVKKM-DLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD 237
Query: 139 RICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKL 198
+ H + + + + A++ +H + ++ +DIK IL KL
Sbjct: 238 IVT-----HTR-MNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKL 288
Query: 199 SDFS----ESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
SDF S+ +P L T ++APE I + D++ G++++E++
Sbjct: 289 SDFGFCAQVSKEVPR------RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVD 342
Query: 255 G 255
G
Sbjct: 343 G 343
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 74/174 (42%), Gaps = 19/174 (10%)
Query: 86 DNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHG 145
D + FN +V H N++++ + + +V EF+E G L D + H
Sbjct: 65 DLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVT--HT 122
Query: 146 PHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFS--- 202
E + + + A++ +H + ++ +DIK IL KLSDF
Sbjct: 123 RMNE----EQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCA 175
Query: 203 -ESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
S+ +P + L T ++APE I + D++ G++++E++ G
Sbjct: 176 QVSKEVPRRKX------LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 223
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 74/174 (42%), Gaps = 19/174 (10%)
Query: 86 DNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHG 145
D + FN +V H N++++ + + +V EF+E G L D + H
Sbjct: 54 DLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVT--HT 111
Query: 146 PHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFS--- 202
E + + + A++ +H + ++ +DIK IL KLSDF
Sbjct: 112 RMNE----EQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCA 164
Query: 203 -ESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
S+ +P + L T ++APE I + D++ G++++E++ G
Sbjct: 165 QVSKEVPRRKX------LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 212
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 74/174 (42%), Gaps = 19/174 (10%)
Query: 86 DNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHG 145
D + FN +V H N++++ + + +V EF+E G L D + H
Sbjct: 58 DLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVT--HT 115
Query: 146 PHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFS--- 202
E + + + A++ +H + ++ +DIK IL KLSDF
Sbjct: 116 RMNE----EQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCA 168
Query: 203 -ESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
S+ +P + L T ++APE I + D++ G++++E++ G
Sbjct: 169 QVSKEVPRRKX------LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 216
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 68/158 (43%), Gaps = 11/158 (6%)
Query: 98 NNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRL 157
I +Q + + K G ++ ++ E++ G+ D + P PL
Sbjct: 54 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPG-----PLDETQIA 107
Query: 158 KIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSH 217
I EI + Y+H + + +DIK + +L E+ KL+DF + + +T + +
Sbjct: 108 TILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQIKRN 162
Query: 218 MLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
T ++APE I + K D++ G+ +EL G
Sbjct: 163 TFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARG 200
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/177 (19%), Positives = 78/177 (44%), Gaps = 8/177 (4%)
Query: 78 PISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLA 137
P+++ + + + A M+H ++++L+G C+ I LV + + +G L
Sbjct: 69 PVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLL 127
Query: 138 DRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAK 197
+ + H + + + L ++I M Y+ R +V +D+ +L N K
Sbjct: 128 EYVHE----HKDNIGSQLLLNWCVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVK 180
Query: 198 LSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
++DF + + E + +++A E I ++DV+ +G+ + EL+T
Sbjct: 181 ITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 72/151 (47%), Gaps = 10/151 (6%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIG 164
Q+++ I+++IG C E E +LV E E G L + H++ ++ +++ ++
Sbjct: 68 QLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD---KNIIELVHQVS 121
Query: 165 NAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTK- 223
M Y+ V +D+ +L + AK+SDF S+ + E + +
Sbjct: 122 MGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPV 178
Query: 224 RYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
++ APE I + K+DV+ FG+L+ E +
Sbjct: 179 KWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 68/158 (43%), Gaps = 11/158 (6%)
Query: 98 NNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRL 157
I +Q + + K G ++ ++ E++ G+ D + P PL
Sbjct: 54 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPG-----PLDETQIA 107
Query: 158 KIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSH 217
I EI + Y+H + + +DIK + +L E+ KL+DF + + +T + +
Sbjct: 108 TILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQIKRN 162
Query: 218 MLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
T ++APE I + K D++ G+ +EL G
Sbjct: 163 XFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARG 200
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/177 (19%), Positives = 78/177 (44%), Gaps = 8/177 (4%)
Query: 78 PISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLA 137
P+++ + + + A M+H ++++L+G C+ I LV + + +G L
Sbjct: 46 PVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLL 104
Query: 138 DRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAK 197
+ + H + + + L ++I M Y+ R +V +D+ +L N K
Sbjct: 105 EYVHE----HKDNIGSQLLLNWCVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVK 157
Query: 198 LSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
++DF + + E + +++A E I ++DV+ +G+ + EL+T
Sbjct: 158 ITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 70/151 (46%), Gaps = 13/151 (8%)
Query: 105 QMNHRNILKLIGCCIETEIPI-LVFEFVEYGTLADRI-CSPHGPHLEPLLWRHRLKIAME 162
Q +H +I+KLIG + TE P+ ++ E G L + + L L+ A +
Sbjct: 72 QFDHPHIVKLIG--VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLI-----LYAYQ 124
Query: 163 IGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRT 222
+ A+AY+ + V +DI +L + KL DF S Y+ E T+ +
Sbjct: 125 LSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLP 180
Query: 223 KRYLAPEYILTGLCNEKTDVFCFGMLLLELL 253
+++APE I +DV+ FG+ + E+L
Sbjct: 181 IKWMAPESINFRRFTSASDVWMFGVCMWEIL 211
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 70/151 (46%), Gaps = 13/151 (8%)
Query: 105 QMNHRNILKLIGCCIETEIPI-LVFEFVEYGTLADRI-CSPHGPHLEPLLWRHRLKIAME 162
Q +H +I+KLIG + TE P+ ++ E G L + + L L+ A +
Sbjct: 70 QFDHPHIVKLIG--VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLI-----LYAYQ 122
Query: 163 IGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRT 222
+ A+AY+ + V +DI +L + KL DF S Y+ E T+ +
Sbjct: 123 LSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLP 178
Query: 223 KRYLAPEYILTGLCNEKTDVFCFGMLLLELL 253
+++APE I +DV+ FG+ + E+L
Sbjct: 179 IKWMAPESINFRRFTSASDVWMFGVCMWEIL 209
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 71/162 (43%), Gaps = 11/162 (6%)
Query: 98 NNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRL 157
I +Q + I + G +++ ++ E++ G+ D + P GP E +
Sbjct: 66 QEITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALD-LLKP-GPLEETYI----A 119
Query: 158 KIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSH 217
I EI + Y+H + + +DIK + +L E KL+DF + + +T + +
Sbjct: 120 TILREILKGLDYLHSERK---IHRDIKAANVLLSEQGDVKLADFGVAGQL--TDTQIKRN 174
Query: 218 MLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTGRRDN 259
T ++APE I + K D++ G+ +EL G N
Sbjct: 175 XFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPN 216
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 74/153 (48%), Gaps = 11/153 (7%)
Query: 106 MNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGN 165
++H NI+K+ + +V E E G L +RI S + L + ++ ++ N
Sbjct: 77 LDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQA-RGKALSEGYVAELMKQMMN 135
Query: 166 AMAYIHIGFRRPIVFKDIKLSQILFDE---YNVAKLSDFSESEYIPEGETHVTSHMLTRT 222
A+AY H + +V KD+K ILF + ++ K+ DF +E E H T+ T
Sbjct: 136 ALAYFH---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE-HSTN--AAGT 189
Query: 223 KRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
Y+APE + K D++ G+++ LLTG
Sbjct: 190 ALYMAPE-VFKRDVTFKCDIWSAGVVMYFLLTG 221
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 11/150 (7%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRI-CSPHGPHLEPLLWRHRLKIAMEI 163
Q +H +I+KLIG E + I + E G L + + L L+ A ++
Sbjct: 95 QFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFLQVRKYSLDLASLI-----LYAYQL 148
Query: 164 GNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTK 223
A+AY+ + V +DI +L + KL DF S Y+ E T+ +
Sbjct: 149 STALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPI 204
Query: 224 RYLAPEYILTGLCNEKTDVFCFGMLLLELL 253
+++APE I +DV+ FG+ + E+L
Sbjct: 205 KWMAPESINFRRFTSASDVWMFGVCMWEIL 234
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 70/151 (46%), Gaps = 13/151 (8%)
Query: 105 QMNHRNILKLIGCCIETEIPI-LVFEFVEYGTLADRI-CSPHGPHLEPLLWRHRLKIAME 162
Q +H +I+KLIG + TE P+ ++ E G L + + L L+ A +
Sbjct: 69 QFDHPHIVKLIG--VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLI-----LYAYQ 121
Query: 163 IGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRT 222
+ A+AY+ + V +DI +L + KL DF S Y+ E T+ +
Sbjct: 122 LSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLP 177
Query: 223 KRYLAPEYILTGLCNEKTDVFCFGMLLLELL 253
+++APE I +DV+ FG+ + E+L
Sbjct: 178 IKWMAPESINFRRFTSASDVWMFGVCMWEIL 208
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 11/150 (7%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRI-CSPHGPHLEPLLWRHRLKIAMEI 163
Q +H +I+KLIG E + I + E G L + + L L+ A ++
Sbjct: 64 QFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFLQVRKYSLDLASLI-----LYAYQL 117
Query: 164 GNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTK 223
A+AY+ + V +DI +L + KL DF S Y+ E T+ +
Sbjct: 118 STALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPI 173
Query: 224 RYLAPEYILTGLCNEKTDVFCFGMLLLELL 253
+++APE I +DV+ FG+ + E+L
Sbjct: 174 KWMAPESINFRRFTSASDVWMFGVCMWEIL 203
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 11/150 (7%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRI-CSPHGPHLEPLLWRHRLKIAMEI 163
Q +H +I+KLIG E + I + E G L + + L L+ A ++
Sbjct: 67 QFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFLQVRKYSLDLASLI-----LYAYQL 120
Query: 164 GNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTK 223
A+AY+ + V +DI +L + KL DF S Y+ E T+ +
Sbjct: 121 STALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPI 176
Query: 224 RYLAPEYILTGLCNEKTDVFCFGMLLLELL 253
+++APE I +DV+ FG+ + E+L
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 73/151 (48%), Gaps = 10/151 (6%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIG 164
Q+++ I+++IG C E E +LV E E G L + H++ ++ +++ ++
Sbjct: 426 QLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD---KNIIELVHQVS 479
Query: 165 NAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTK- 223
M Y+ V +D+ +L + AK+SDF S+ + E + + +
Sbjct: 480 MGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 536
Query: 224 RYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
++ APE I + K+DV+ FG+L+ E +
Sbjct: 537 KWYAPECINYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 76/182 (41%), Gaps = 16/182 (8%)
Query: 79 ISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVF-EFVEYGTLA 137
+++ Y+E + Q H NI++L G + +P+++ EF+E G L
Sbjct: 45 VAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEG-VVTNSMPVMILTEFMENGALD 103
Query: 138 D--RICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNV 195
R+ ++ + + M M+Y+H +D+ IL + V
Sbjct: 104 SFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSYVH---------RDLAARNILVNSNLV 154
Query: 196 AKLSDFSESEYIPEGETHVTSHMLTRTK---RYLAPEYILTGLCNEKTDVFCFGMLLLEL 252
K+SDF S ++ E + T K R+ APE I +D + +G+++ E+
Sbjct: 155 CKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEV 214
Query: 253 LT 254
++
Sbjct: 215 MS 216
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 67/158 (42%), Gaps = 11/158 (6%)
Query: 98 NNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRL 157
I +Q + + K G ++ ++ E++ G+ D + P PL
Sbjct: 74 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPG-----PLDETQIA 127
Query: 158 KIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSH 217
I EI + Y+H + +DIK + +L E+ KL+DF + + +T + +
Sbjct: 128 TILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQIKRN 182
Query: 218 MLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
T ++APE I + K D++ G+ +EL G
Sbjct: 183 TFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARG 220
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 70/151 (46%), Gaps = 13/151 (8%)
Query: 105 QMNHRNILKLIGCCIETEIPI-LVFEFVEYGTLADRI-CSPHGPHLEPLLWRHRLKIAME 162
Q +H +I+KLIG + TE P+ ++ E G L + + L L+ A +
Sbjct: 67 QFDHPHIVKLIG--VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLI-----LYAYQ 119
Query: 163 IGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRT 222
+ A+AY+ + V +DI +L + KL DF S Y+ E T+ +
Sbjct: 120 LSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLP 175
Query: 223 KRYLAPEYILTGLCNEKTDVFCFGMLLLELL 253
+++APE I +DV+ FG+ + E+L
Sbjct: 176 IKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 73/151 (48%), Gaps = 10/151 (6%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIG 164
Q+++ I+++IG C E E +LV E E G L + H++ ++ +++ ++
Sbjct: 427 QLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD---KNIIELVHQVS 480
Query: 165 NAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTK- 223
M Y+ V +D+ +L + AK+SDF S+ + E + + +
Sbjct: 481 MGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 537
Query: 224 RYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
++ APE I + K+DV+ FG+L+ E +
Sbjct: 538 KWYAPECINYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 60/127 (47%), Gaps = 5/127 (3%)
Query: 130 FVEYGTLAD--RICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQ 187
FVE +L+D +P + + L H + + ++ M ++ R + +D+
Sbjct: 174 FVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARN 230
Query: 188 ILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGM 247
IL E NV K+ DF + I + +V +++APE I + ++DV+ FG+
Sbjct: 231 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 290
Query: 248 LLLELLT 254
LL E+ +
Sbjct: 291 LLWEIFS 297
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 60/127 (47%), Gaps = 5/127 (3%)
Query: 130 FVEYGTLAD--RICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQ 187
FVE +L+D +P + + L H + + ++ M ++ R + +D+
Sbjct: 172 FVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARN 228
Query: 188 ILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGM 247
IL E NV K+ DF + I + +V +++APE I + ++DV+ FG+
Sbjct: 229 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 288
Query: 248 LLLELLT 254
LL E+ +
Sbjct: 289 LLWEIFS 295
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 60/127 (47%), Gaps = 5/127 (3%)
Query: 130 FVEYGTLAD--RICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQ 187
FVE +L+D +P + + L H + + ++ M ++ R + +D+
Sbjct: 165 FVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARN 221
Query: 188 ILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGM 247
IL E NV K+ DF + I + +V +++APE I + ++DV+ FG+
Sbjct: 222 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 281
Query: 248 LLLELLT 254
LL E+ +
Sbjct: 282 LLWEIFS 288
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 77/171 (45%), Gaps = 20/171 (11%)
Query: 93 ENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRI----CSPHGPHL 148
E F +V A ++ I+ L G E + E +E G+L I C P L
Sbjct: 94 EVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRAL 153
Query: 149 EPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFD-EYNVAKLSDFSESEYI 207
+ L A+E + Y+H R I+ D+K +L + + A L DF + +
Sbjct: 154 ------YYLGQALE---GLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCL 201
Query: 208 -PEG--ETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
P+G ++ +T + T+ ++APE ++ C+ K D++ ++L +L G
Sbjct: 202 QPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 252
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 77/171 (45%), Gaps = 20/171 (11%)
Query: 93 ENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRI----CSPHGPHL 148
E F +V A ++ I+ L G E + E +E G+L I C P L
Sbjct: 108 EVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRAL 167
Query: 149 EPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFD-EYNVAKLSDFSESEYI 207
+ L A+E + Y+H R I+ D+K +L + + A L DF + +
Sbjct: 168 ------YYLGQALE---GLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCL 215
Query: 208 -PEG--ETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
P+G ++ +T + T+ ++APE ++ C+ K D++ ++L +L G
Sbjct: 216 QPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 266
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 85/193 (44%), Gaps = 17/193 (8%)
Query: 69 LYKG-FLENRPISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILV 127
+YKG + + + ++K D E + F N + + H NIL +G + + I V
Sbjct: 52 VYKGKWHGDVAVKILKVVDPTPEQFQAFR-NEVAVLRKTRHVNILLFMGYMTKDNLAI-V 109
Query: 128 FEFVEYGTLADRICSPHGPHLEPLLWR--HRLKIAMEIGNAMAYIHIGFRRPIVFKDIKL 185
++ E +L + H++ ++ + IA + M Y+H + I+ +D+K
Sbjct: 110 TQWCEGSSLYKHL------HVQETKFQMFQLIDIARQTAQGMDYLHA---KNIIHRDMKS 160
Query: 186 SQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNE---KTDV 242
+ I E K+ DF + T + ++APE I N ++DV
Sbjct: 161 NNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDV 220
Query: 243 FCFGMLLLELLTG 255
+ +G++L EL+TG
Sbjct: 221 YSYGIVLYELMTG 233
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 60/127 (47%), Gaps = 5/127 (3%)
Query: 130 FVEYGTLAD--RICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQ 187
FVE +L+D +P + + L H + + ++ M ++ R + +D+
Sbjct: 167 FVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARN 223
Query: 188 ILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGM 247
IL E NV K+ DF + I + +V +++APE I + ++DV+ FG+
Sbjct: 224 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 283
Query: 248 LLLELLT 254
LL E+ +
Sbjct: 284 LLWEIFS 290
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 77/171 (45%), Gaps = 20/171 (11%)
Query: 93 ENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRI----CSPHGPHL 148
E F +V A ++ I+ L G E + E +E G+L I C P L
Sbjct: 110 EVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRAL 169
Query: 149 EPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFD-EYNVAKLSDFSESEYI 207
+ L A+E + Y+H R I+ D+K +L + + A L DF + +
Sbjct: 170 ------YYLGQALE---GLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCL 217
Query: 208 -PEG--ETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
P+G ++ +T + T+ ++APE ++ C+ K D++ ++L +L G
Sbjct: 218 QPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 268
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 66/150 (44%), Gaps = 11/150 (7%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRI-CSPHGPHLEPLLWRHRLKIAMEI 163
Q +H +I+KLIG E + I + E G L + L L+ A ++
Sbjct: 447 QFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFLQVRKFSLDLASLIL-----YAYQL 500
Query: 164 GNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTK 223
A+AY+ + V +DI +L + KL DF S Y+ E T+ +
Sbjct: 501 STALAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYM-EDSTYYKASKGKLPI 556
Query: 224 RYLAPEYILTGLCNEKTDVFCFGMLLLELL 253
+++APE I +DV+ FG+ + E+L
Sbjct: 557 KWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 6/98 (6%)
Query: 160 AMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSE-SEYIPEGETHVTSHM 218
EI +A+ Y+H + +V++D+KL ++ D+ K++DF E I +G T T
Sbjct: 254 GAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT--- 308
Query: 219 LTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTGR 256
T YLAPE + D + G+++ E++ GR
Sbjct: 309 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 346
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 77/177 (43%), Gaps = 10/177 (5%)
Query: 79 ISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLAD 138
I +K G Y++ + Q +H NI+ L G + + +++ E++E G+L
Sbjct: 47 IKTLKAG--YTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA 104
Query: 139 RICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKL 198
+ G L + + IG+ M Y+ V +D+ IL + V K+
Sbjct: 105 FLRKNDGRFTVIQL----VGMLRGIGSGMKYLS---DMSYVHRDLAARNILVNSNLVCKV 157
Query: 199 SDFSESEYIPEG-ETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
SDF S + + E T+ R+ APE I +DV+ +G+++ E+++
Sbjct: 158 SDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 214
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 13/107 (12%)
Query: 157 LKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFS----------ESEY 206
L I ++I A+ ++H + ++ +D+K S I F +V K+ DF E
Sbjct: 167 LHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 207 IPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELL 253
+ + T TK Y++PE I + K D+F G++L ELL
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 66/150 (44%), Gaps = 11/150 (7%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRI-CSPHGPHLEPLLWRHRLKIAMEI 163
Q +H +I+KLIG E + I + E G L + L L+ A ++
Sbjct: 447 QFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFLQVRKFSLDLASLIL-----YAYQL 500
Query: 164 GNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTK 223
A+AY+ + V +DI +L + KL DF S Y+ E T+ +
Sbjct: 501 STALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPI 556
Query: 224 RYLAPEYILTGLCNEKTDVFCFGMLLLELL 253
+++APE I +DV+ FG+ + E+L
Sbjct: 557 KWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 6/98 (6%)
Query: 160 AMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSE-SEYIPEGETHVTSHM 218
EI +A+ Y+H + +V++D+KL ++ D+ K++DF E I +G T T
Sbjct: 257 GAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT--- 311
Query: 219 LTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTGR 256
T YLAPE + D + G+++ E++ GR
Sbjct: 312 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 349
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 77/177 (43%), Gaps = 10/177 (5%)
Query: 79 ISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLAD 138
I +K G Y++ + Q +H NI+ L G + + +++ E++E G+L
Sbjct: 62 IKTLKAG--YTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA 119
Query: 139 RICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKL 198
+ G L + + IG+ M Y+ V +D+ IL + V K+
Sbjct: 120 FLRKNDGRFTVIQL----VGMLRGIGSGMKYLS---DMSAVHRDLAARNILVNSNLVCKV 172
Query: 199 SDFSESEYIPEG-ETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
SDF S + + E T+ R+ APE I +DV+ +G+++ E+++
Sbjct: 173 SDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 229
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 69/151 (45%), Gaps = 13/151 (8%)
Query: 105 QMNHRNILKLIGCCIETEIPI-LVFEFVEYGTLADRI-CSPHGPHLEPLLWRHRLKIAME 162
Q +H +I+KLIG + TE P+ ++ E G L + L L+ A +
Sbjct: 67 QFDHPHIVKLIG--VITENPVWIIMELCTLGELRSFLQVRKFSLDLASLI-----LYAYQ 119
Query: 163 IGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRT 222
+ A+AY+ + V +DI +L + KL DF S Y+ E T+ +
Sbjct: 120 LSTALAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYM-EDSTYYKASKGKLP 175
Query: 223 KRYLAPEYILTGLCNEKTDVFCFGMLLLELL 253
+++APE I +DV+ FG+ + E+L
Sbjct: 176 IKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 77/177 (43%), Gaps = 10/177 (5%)
Query: 79 ISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLAD 138
I +K G Y++ + Q +H NI+ L G + + +++ E++E G+L
Sbjct: 41 IKTLKAG--YTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA 98
Query: 139 RICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKL 198
+ G L + + IG+ M Y+ V +D+ IL + V K+
Sbjct: 99 FLRKNDGRFTVIQL----VGMLRGIGSGMKYLS---DMSYVHRDLAARNILVNSNLVCKV 151
Query: 199 SDFSESEYIPEG-ETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
SDF S + + E T+ R+ APE I +DV+ +G+++ E+++
Sbjct: 152 SDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 208
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 6/103 (5%)
Query: 157 LKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTS 216
+ IA + M Y+H + I+ +D+K + I E K+ DF +
Sbjct: 134 IDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF 190
Query: 217 HMLTRTKRYLAPEYILTGLCNE---KTDVFCFGMLLLELLTGR 256
L+ + ++APE I N ++DV+ FG++L EL+TG+
Sbjct: 191 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 233
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 6/103 (5%)
Query: 157 LKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTS 216
+ IA + M Y+H + I+ +D+K + I E K+ DF +
Sbjct: 135 IDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF 191
Query: 217 HMLTRTKRYLAPEYILTGLCNE---KTDVFCFGMLLLELLTGR 256
L+ + ++APE I N ++DV+ FG++L EL+TG+
Sbjct: 192 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 7/104 (6%)
Query: 155 HRLKIAM-EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETH 213
H ++I + EI A+ ++H + I+++DIKL IL D L+DF S+ ET
Sbjct: 159 HEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETE 215
Query: 214 VTSHMLTRTKRYLAPEYILTGLC--NEKTDVFCFGMLLLELLTG 255
++ T Y+AP+ + G ++ D + G+L+ ELLTG
Sbjct: 216 -RAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTG 258
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 53/109 (48%), Gaps = 17/109 (15%)
Query: 157 LKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTS 216
L I ++I A+ ++H + ++ +D+K S I F +V K+ DF + + E T
Sbjct: 121 LHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQT- 176
Query: 217 HMLTR------------TKRYLAPEYILTGLCNEKTDVFCFGMLLLELL 253
+LT TK Y++PE I + K D+F G++L ELL
Sbjct: 177 -VLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 178 IVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCN 237
++++D+K +L D+ K++DF ++ + +G T L T YLAPE IL+ N
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAKRV-KGRTW----XLCGTPEYLAPEIILSKGYN 216
Query: 238 EKTDVFCFGMLLLELLTG 255
+ D + G+L+ E+ G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 178 IVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCN 237
++++D+K +L D+ K++DF ++ + +G T L T YLAPE IL+ N
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAKRV-KGRTW----XLCGTPEYLAPEIILSKGYN 216
Query: 238 EKTDVFCFGMLLLELLTG 255
+ D + G+L+ E+ G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 6/103 (5%)
Query: 157 LKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTS 216
+ IA + M Y+H + I+ +D+K + I E K+ DF +
Sbjct: 112 IDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF 168
Query: 217 HMLTRTKRYLAPEYILTGLCNE---KTDVFCFGMLLLELLTGR 256
L+ + ++APE I N ++DV+ FG++L EL+TG+
Sbjct: 169 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 6/103 (5%)
Query: 157 LKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTS 216
+ IA + M Y+H + I+ +D+K + I E K+ DF +
Sbjct: 112 IDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF 168
Query: 217 HMLTRTKRYLAPEYILTGLCNE---KTDVFCFGMLLLELLTGR 256
L+ + ++APE I N ++DV+ FG++L EL+TG+
Sbjct: 169 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 178 IVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCN 237
++++D+K +L D+ K++DF ++ + +G T L T YLAPE IL+ N
Sbjct: 163 LIYRDLKPENLLIDQQGYIKVADFGFAKRV-KGRTW----XLCGTPEYLAPEIILSKGYN 217
Query: 238 EKTDVFCFGMLLLELLTG 255
+ D + G+L+ E+ G
Sbjct: 218 KAVDWWALGVLIYEMAAG 235
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 178 IVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCN 237
++++D+K +L D+ K++DF ++ + +G T L T YLAPE IL+ N
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAKRV-KGRTW----XLCGTPEYLAPEIILSKGYN 216
Query: 238 EKTDVFCFGMLLLELLTG 255
+ D + G+L+ E+ G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 6/103 (5%)
Query: 157 LKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTS 216
+ IA + M Y+H + I+ +D+K + I E K+ DF +
Sbjct: 109 IDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF 165
Query: 217 HMLTRTKRYLAPEYILTGLCNE---KTDVFCFGMLLLELLTGR 256
L+ + ++APE I N ++DV+ FG++L EL+TG+
Sbjct: 166 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 208
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 6/103 (5%)
Query: 157 LKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTS 216
+ IA + M Y+H + I+ +D+K + I E K+ DF +
Sbjct: 107 IDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF 163
Query: 217 HMLTRTKRYLAPEYILTGLCNE---KTDVFCFGMLLLELLTGR 256
L+ + ++APE I N ++DV+ FG++L EL+TG+
Sbjct: 164 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 6/103 (5%)
Query: 157 LKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTS 216
+ IA + M Y+H + I+ +D+K + I E K+ DF +
Sbjct: 107 IDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF 163
Query: 217 HMLTRTKRYLAPEYILTGLCNE---KTDVFCFGMLLLELLTGR 256
L+ + ++APE I N ++DV+ FG++L EL+TG+
Sbjct: 164 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 6/103 (5%)
Query: 157 LKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTS 216
+ IA + M Y+H + I+ +D+K + I E K+ DF +
Sbjct: 135 IDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQF 191
Query: 217 HMLTRTKRYLAPEYILTGLCNE---KTDVFCFGMLLLELLTGR 256
L+ + ++APE I N ++DV+ FG++L EL+TG+
Sbjct: 192 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 70/163 (42%), Gaps = 25/163 (15%)
Query: 107 NHRNILKLIGCCIETEIP------ILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIA 160
+HRNI G I+ P LV EF G++ D I + G L+ + I
Sbjct: 79 HHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAY---IC 135
Query: 161 MEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLT 220
EI ++++H + ++ +DIK +L E KL DF S + T +
Sbjct: 136 REILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL--DRTVGRRNTFI 190
Query: 221 RTKRYLAPEYILTGLCNE--------KTDVFCFGMLLLELLTG 255
T ++APE I C+E K+D++ G+ +E+ G
Sbjct: 191 GTPYWMAPEVI---ACDENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 6/103 (5%)
Query: 157 LKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTS 216
+ IA + M Y+H + I+ +D+K + I E K+ DF +
Sbjct: 127 IDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQF 183
Query: 217 HMLTRTKRYLAPEYILTGLCNE---KTDVFCFGMLLLELLTGR 256
L+ + ++APE I N ++DV+ FG++L EL+TG+
Sbjct: 184 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 226
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 8/96 (8%)
Query: 160 AMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHML 219
A +I Y+H ++++D+K +L DE +++DF ++ + +G T L
Sbjct: 134 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRV-KGRTW----XL 185
Query: 220 TRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
T YLAPE IL+ N+ D + G+L+ E+ G
Sbjct: 186 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 67/150 (44%), Gaps = 10/150 (6%)
Query: 108 HRNILKLIGCCIET--EIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGN 165
H NI+K G C E L+ EF+ G+L + + + + + +LK A++I
Sbjct: 82 HENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPK----NKNKINLKQQLKYAVQICK 137
Query: 166 AMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYI-PEGETHVTSHMLTRTKR 224
M Y+ R V +D+ +L + + K+ DF ++ I + E
Sbjct: 138 GMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVF 194
Query: 225 YLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+ APE ++ +DV+ FG+ L ELLT
Sbjct: 195 WYAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 67/150 (44%), Gaps = 10/150 (6%)
Query: 108 HRNILKLIGCCIET--EIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGN 165
H NI+K G C E L+ EF+ G+L + + + + + +LK A++I
Sbjct: 70 HENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPK----NKNKINLKQQLKYAVQICK 125
Query: 166 AMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYI-PEGETHVTSHMLTRTKR 224
M Y+ R V +D+ +L + + K+ DF ++ I + E
Sbjct: 126 GMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVF 182
Query: 225 YLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+ APE ++ +DV+ FG+ L ELLT
Sbjct: 183 WYAPECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 8/97 (8%)
Query: 160 AMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHML 219
A EI + ++H F +V++D+K + IL DE+ ++SD + + + H +
Sbjct: 297 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---- 349
Query: 220 TRTKRYLAPEYILTGLC-NEKTDVFCFGMLLLELLTG 255
T Y+APE + G+ + D F G +L +LL G
Sbjct: 350 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 386
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 69/157 (43%), Gaps = 25/157 (15%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKI----- 159
Q +H +I+KLIG + TE P+ + +E TL + L L + +
Sbjct: 67 QFDHPHIVKLIG--VITENPVWII--MELCTLGE---------LRSFLQVRKFSLDLASL 113
Query: 160 ---AMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTS 216
A ++ A+AY+ + V +DI +L + KL DF S Y+ E T +
Sbjct: 114 ILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTXXKA 169
Query: 217 HMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELL 253
+++APE I +DV+ FG+ + E+L
Sbjct: 170 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 8/97 (8%)
Query: 160 AMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHML 219
A EI + ++H F +V++D+K + IL DE+ ++SD + + + H +
Sbjct: 298 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---- 350
Query: 220 TRTKRYLAPEYILTGLC-NEKTDVFCFGMLLLELLTG 255
T Y+APE + G+ + D F G +L +LL G
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 6/103 (5%)
Query: 157 LKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTS 216
+ IA + M Y+H + I+ +D+K + I E K+ DF +
Sbjct: 107 IDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQF 163
Query: 217 HMLTRTKRYLAPEYILTGLCNE---KTDVFCFGMLLLELLTGR 256
L+ + ++APE I N ++DV+ FG++L EL+TG+
Sbjct: 164 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 90/209 (43%), Gaps = 29/209 (13%)
Query: 68 KLYKGFL-------ENRPISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIE 120
K+YKG L + + +++ D + + A++ H N++ L+G +
Sbjct: 41 KVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTK 100
Query: 121 TEIPILVFEFVEYGTLADRIC--SPHG------------PHLEPLLWRHRLKIAMEIGNA 166
+ ++F + +G L + + SPH LEP + H + +I
Sbjct: 101 DQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVH---LVAQIAAG 157
Query: 167 MAYIHIGFRRPIVFKDIKLSQIL-FDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRY 225
M Y+ +V KD+ +L +D+ NV K+SD + + + R+
Sbjct: 158 MEYLS---SHHVVHKDLATRNVLVYDKLNV-KISDLGLFREVYAADYYKLLGNSLLPIRW 213
Query: 226 LAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+APE I+ G + +D++ +G++L E+ +
Sbjct: 214 MAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 90/209 (43%), Gaps = 29/209 (13%)
Query: 68 KLYKGFL-------ENRPISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIE 120
K+YKG L + + +++ D + + A++ H N++ L+G +
Sbjct: 24 KVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTK 83
Query: 121 TEIPILVFEFVEYGTLADRIC--SPHG------------PHLEPLLWRHRLKIAMEIGNA 166
+ ++F + +G L + + SPH LEP + H + +I
Sbjct: 84 DQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVH---LVAQIAAG 140
Query: 167 MAYIHIGFRRPIVFKDIKLSQIL-FDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRY 225
M Y+ +V KD+ +L +D+ NV K+SD + + + R+
Sbjct: 141 MEYLS---SHHVVHKDLATRNVLVYDKLNV-KISDLGLFREVYAADYYKLLGNSLLPIRW 196
Query: 226 LAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+APE I+ G + +D++ +G++L E+ +
Sbjct: 197 MAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/181 (19%), Positives = 76/181 (41%), Gaps = 14/181 (7%)
Query: 79 ISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLAD 138
+++ Y+E + Q +H N++ L G ++ +++ EF+E G+L
Sbjct: 38 VAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDS 97
Query: 139 RICSPHGPH--LEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVA 196
+ G ++ + + M+ M Y+H + + IL + V
Sbjct: 98 FLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVH---------RALAARNILVNSNLVC 148
Query: 197 KLSDFSESEYIPEGETHVTSHMLTRTK---RYLAPEYILTGLCNEKTDVFCFGMLLLELL 253
K+SDF S ++ + + T K R+ APE I +DV+ +G+++ E++
Sbjct: 149 KVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVM 208
Query: 254 T 254
+
Sbjct: 209 S 209
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 68/157 (43%), Gaps = 12/157 (7%)
Query: 100 IVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHR--L 157
+ A M H NI++ E +V ++ E G L RI + G +L++ L
Sbjct: 74 VAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKG-----VLFQEDQIL 128
Query: 158 KIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSH 217
++I A+ ++H R I+ +DIK I + +L DF + + T +
Sbjct: 129 DWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVL--NSTVELAR 183
Query: 218 MLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
T YL+PE N K+D++ G +L EL T
Sbjct: 184 ACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCT 220
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 8/97 (8%)
Query: 160 AMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHML 219
A EI + ++H F +V++D+K + IL DE+ ++SD + + + H +
Sbjct: 298 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---- 350
Query: 220 TRTKRYLAPEYILTGLC-NEKTDVFCFGMLLLELLTG 255
T Y+APE + G+ + D F G +L +LL G
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 8/97 (8%)
Query: 160 AMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHML 219
A EI + ++H F +V++D+K + IL DE+ ++SD + + + H +
Sbjct: 298 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---- 350
Query: 220 TRTKRYLAPEYILTGLC-NEKTDVFCFGMLLLELLTG 255
T Y+APE + G+ + D F G +L +LL G
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 8/96 (8%)
Query: 160 AMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHML 219
A +I Y+H ++++D+K +L D+ +++DF ++ + +G T L
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XL 198
Query: 220 TRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
T YLAPE IL+ N+ D + G+L+ E+ G
Sbjct: 199 AGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 6/98 (6%)
Query: 160 AMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSE-SEYIPEGETHVTSHM 218
EI +A+ Y+H + +V++D+KL ++ D+ K++DF E I +G T
Sbjct: 114 GAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG---ATMKX 168
Query: 219 LTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTGR 256
T YLAPE + D + G+++ E++ GR
Sbjct: 169 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 206
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 6/98 (6%)
Query: 160 AMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSE-SEYIPEGETHVTSHM 218
EI +A+ Y+H + +V++D+KL ++ D+ K++DF E I +G T
Sbjct: 116 GAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG---ATMKX 170
Query: 219 LTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTGR 256
T YLAPE + D + G+++ E++ GR
Sbjct: 171 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 208
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 6/98 (6%)
Query: 160 AMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSE-SEYIPEGETHVTSHM 218
EI +A+ Y+H + +V++D+KL ++ D+ K++DF E I +G T
Sbjct: 115 GAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG---ATMKX 169
Query: 219 LTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTGR 256
T YLAPE + D + G+++ E++ GR
Sbjct: 170 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 178 IVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCN 237
++++D+K ++ D+ K++DF ++ + +G T L T YLAPE IL+ N
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGFAKRV-KGRTW----XLCGTPEYLAPEIILSKGYN 216
Query: 238 EKTDVFCFGMLLLELLTG 255
+ D + G+L+ E+ G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 178 IVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCN 237
++++D+K ++ D+ K++DF ++ + +G T L T YLAPE IL+ N
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGLAKRV-KGRTW----XLCGTPEYLAPEIILSKGYN 216
Query: 238 EKTDVFCFGMLLLELLTG 255
+ D + G+L+ E+ G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 178 IVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCN 237
++++D+K ++ D+ K++DF ++ + +G T L T YLAPE IL+ N
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGFAKRV-KGRTW----XLCGTPEYLAPEIILSKGYN 216
Query: 238 EKTDVFCFGMLLLELLTG 255
+ D + G+L+ E+ G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 178 IVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCN 237
++++D+K ++ D+ K++DF ++ + +G T L T YLAPE IL+ N
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAKRV-KGRTW----XLCGTPEYLAPEIILSKGYN 217
Query: 238 EKTDVFCFGMLLLELLTG 255
+ D + G+L+ E+ G
Sbjct: 218 KAVDWWALGVLIYEMAAG 235
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 178 IVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCN 237
++++D+K ++ D+ K++DF ++ + +G T L T YLAPE IL+ N
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAKRV-KGRTW----XLCGTPEYLAPEIILSKGYN 217
Query: 238 EKTDVFCFGMLLLELLTG 255
+ D + G+L+ E+ G
Sbjct: 218 KAVDWWALGVLIYEMAAG 235
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 178 IVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCN 237
++++D+K ++ D+ K++DF ++ + +G T L T YLAPE IL+ N
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAKRV-KGRTW----XLCGTPEYLAPEIILSKGYN 217
Query: 238 EKTDVFCFGMLLLELLTG 255
+ D + G+L+ E+ G
Sbjct: 218 KAVDWWALGVLIYEMAAG 235
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 178 IVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCN 237
++++D+K ++ D+ K++DF ++ + +G T L T YLAPE IL+ N
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAKRV-KGRTW----XLCGTPEYLAPEIILSKGYN 217
Query: 238 EKTDVFCFGMLLLELLTG 255
+ D + G+L+ E+ G
Sbjct: 218 KAVDWWALGVLIYEMAAG 235
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 8/96 (8%)
Query: 160 AMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHML 219
A +I Y+H ++++D+K +L D+ +++DF ++ + +G T L
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XL 198
Query: 220 TRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
T YLAPE IL+ N+ D + G+L+ E+ G
Sbjct: 199 XGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 178 IVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCN 237
++++D+K +L D+ +++DF ++ + +G T L T YLAPE IL+ N
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWT----LCGTPEYLAPEIILSKGYN 217
Query: 238 EKTDVFCFGMLLLELLTG 255
+ D + G+L+ E+ G
Sbjct: 218 KAVDWWALGVLIYEMAAG 235
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 61/130 (46%), Gaps = 13/130 (10%)
Query: 126 LVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKL 185
+V E+V G + + G EP H A +I Y+H ++++D+K
Sbjct: 118 MVMEYVAGGEMFSHLRRI-GRFXEP----HARFYAAQIVLTFEYLH---SLDLIYRDLKP 169
Query: 186 SQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCF 245
+L D+ +++DF ++ + +G T L T YLAPE IL+ N+ D +
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRV-KGRTW----XLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 246 GMLLLELLTG 255
G+L+ E+ G
Sbjct: 225 GVLIYEMAAG 234
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 61/130 (46%), Gaps = 13/130 (10%)
Query: 126 LVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKL 185
+V E+V G + + G EP H A +I Y+H ++++D+K
Sbjct: 118 MVMEYVAGGEMFSHLRRI-GRFXEP----HARFYAAQIVLTFEYLH---SLDLIYRDLKP 169
Query: 186 SQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCF 245
+L D+ +++DF ++ + +G T L T YLAPE IL+ N+ D +
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRV-KGRTW----XLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 246 GMLLLELLTG 255
G+L+ E+ G
Sbjct: 225 GVLIYEMAAG 234
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 166 AMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRY 225
MA ++ +R I+ +D+K IL DE+ ++DF+ + +P ET +T+ + TK Y
Sbjct: 125 VMALDYLQNQR-IIHRDMKPDNILLDEHGHVHITDFNIAAMLPR-ETQITT--MAGTKPY 180
Query: 226 LAPEYILT---GLCNEKTDVFCFGMLLLELLTGRR 257
+APE + + D + G+ ELL GRR
Sbjct: 181 MAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRR 215
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 178 IVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCN 237
++++D+K +L D+ +++DF ++ + +G T L T YLAPE IL+ N
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGATWT----LCGTPEYLAPEIILSKGYN 237
Query: 238 EKTDVFCFGMLLLELLTG 255
+ D + G+L+ E+ G
Sbjct: 238 KAVDWWALGVLIYEMAAG 255
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 178 IVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCN 237
++++D+K +L D+ +++DF ++ + +G T L T YLAPE IL+ N
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XLCGTPEYLAPEIILSKGYN 237
Query: 238 EKTDVFCFGMLLLELLTG 255
+ D + G+L+ E+ G
Sbjct: 238 KAVDWWALGVLIYEMAAG 255
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 61/130 (46%), Gaps = 13/130 (10%)
Query: 126 LVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKL 185
+V E+V G + + G EP H A +I Y+H ++++D+K
Sbjct: 139 MVMEYVAGGEMFSHLRRI-GRFXEP----HARFYAAQIVLTFEYLH---SLDLIYRDLKP 190
Query: 186 SQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCF 245
+L D+ +++DF ++ + +G T L T YLAPE IL+ N+ D +
Sbjct: 191 ENLLIDQQGYIQVTDFGFAKRV-KGRTW----XLCGTPEYLAPEIILSKGYNKAVDWWAL 245
Query: 246 GMLLLELLTG 255
G+L+ E+ G
Sbjct: 246 GVLIYEMAAG 255
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 61/130 (46%), Gaps = 13/130 (10%)
Query: 126 LVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKL 185
+V E+V G + + G EP H A +I Y+H ++++D+K
Sbjct: 118 MVMEYVPGGEMFSHLRRI-GRFXEP----HARFYAAQIVLTFEYLH---SLDLIYRDLKP 169
Query: 186 SQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCF 245
+L D+ +++DF ++ + +G T L T YLAPE IL+ N+ D +
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRV-KGRTW----XLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 246 GMLLLELLTG 255
G+L+ E+ G
Sbjct: 225 GVLIYEMAAG 234
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 61/130 (46%), Gaps = 13/130 (10%)
Query: 126 LVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKL 185
+V E+V G + + G EP H A +I Y+H ++++D+K
Sbjct: 118 MVMEYVAGGEMFSHLRRI-GRFXEP----HARFYAAQIVLTFEYLH---SLDLIYRDLKP 169
Query: 186 SQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCF 245
+L D+ +++DF ++ + +G T L T YLAPE IL+ N+ D +
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRV-KGRTW----XLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 246 GMLLLELLTG 255
G+L+ E+ G
Sbjct: 225 GVLIYEMAAG 234
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 8/96 (8%)
Query: 160 AMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHML 219
A +I Y+H ++++D+K +L D+ +++DF ++ + +G T L
Sbjct: 133 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWT----L 184
Query: 220 TRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
T YLAPE IL+ N+ D + G+L+ E+ G
Sbjct: 185 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 220
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 61/130 (46%), Gaps = 13/130 (10%)
Query: 126 LVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKL 185
+V E+V G + + G EP H A +I Y+H ++++D+K
Sbjct: 118 MVMEYVAGGEMFSHLRRI-GRFAEP----HARFYAAQIVLTFEYLH---SLDLIYRDLKP 169
Query: 186 SQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCF 245
+L D+ +++DF ++ + +G T L T YLAPE IL+ N+ D +
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRV-KGRTW----XLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 246 GMLLLELLTG 255
G+L+ E+ G
Sbjct: 225 GVLIYEMAAG 234
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 61/130 (46%), Gaps = 13/130 (10%)
Query: 126 LVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKL 185
+V E+V G + + G EP H A +I Y+H ++++D+K
Sbjct: 119 MVMEYVPGGEMFSHLRRI-GRFXEP----HARFYAAQIVLTFEYLH---SLDLIYRDLKP 170
Query: 186 SQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCF 245
+L D+ +++DF ++ + +G T L T YLAPE IL+ N+ D +
Sbjct: 171 ENLLIDQQGYIQVTDFGFAKRV-KGRTW----XLCGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 246 GMLLLELLTG 255
G+L+ E+ G
Sbjct: 226 GVLIYEMAAG 235
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 65/152 (42%), Gaps = 12/152 (7%)
Query: 106 MNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAM-EIG 164
+ H++I +L +V E+ G L D I S + L ++ +I
Sbjct: 65 LRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIIS------QDRLSEEETRVVFRQIV 118
Query: 165 NAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKR 224
+A+AY+H + +D+K +LFDEY+ KL DF P+G +
Sbjct: 119 SAVAYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAK-PKGNKDYHLQTCCGSLA 174
Query: 225 YLAPEYIL-TGLCNEKTDVFCFGMLLLELLTG 255
Y APE I + DV+ G+LL L+ G
Sbjct: 175 YAAPELIQGKSYLGSEADVWSMGILLYVLMCG 206
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 61/130 (46%), Gaps = 13/130 (10%)
Query: 126 LVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKL 185
+V E+V G + + G EP H A +I Y+H ++++D+K
Sbjct: 118 MVMEYVPGGEMFSHLRRI-GRFXEP----HARFYAAQIVLTFEYLH---SLDLIYRDLKP 169
Query: 186 SQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCF 245
+L D+ +++DF ++ + +G T L T YLAPE IL+ N+ D +
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRV-KGRTW----XLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 246 GMLLLELLTG 255
G+L+ E+ G
Sbjct: 225 GVLIYEMAAG 234
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 61/130 (46%), Gaps = 13/130 (10%)
Query: 126 LVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKL 185
+V E+V G + + G EP H A +I Y+H ++++D+K
Sbjct: 113 MVMEYVAGGEMFSHLRRI-GRFXEP----HARFYAAQIVLTFEYLH---SLDLIYRDLKP 164
Query: 186 SQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCF 245
+L D+ +++DF ++ + +G T L T YLAPE IL+ N+ D +
Sbjct: 165 ENLLIDQQGYIQVTDFGFAKRV-KGRTW----XLCGTPEYLAPEIILSKGYNKAVDWWAL 219
Query: 246 GMLLLELLTG 255
G+L+ E+ G
Sbjct: 220 GVLIYEMAAG 229
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 8/96 (8%)
Query: 160 AMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHML 219
A +I Y+H ++++D+K +L D+ +++DF ++ + +G T L
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XL 198
Query: 220 TRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
T YLAPE IL+ N+ D + G+L+ E+ G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 76/171 (44%), Gaps = 20/171 (11%)
Query: 93 ENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRI----CSPHGPHL 148
E F ++ A + I+ L G E + E +E G+L + C P L
Sbjct: 129 EVFRAEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRAL 188
Query: 149 EPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFD-EYNVAKLSDFSESEYI 207
+ L A+E + Y+H R I+ D+K +L + + A L DF + +
Sbjct: 189 ------YYLGQALE---GLEYLH---SRRILHGDVKADNVLLSSDGSHAALCDFGHAVCL 236
Query: 208 -PEG--ETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
P+G ++ +T + T+ ++APE +L C+ K DV+ ++L +L G
Sbjct: 237 QPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 287
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 178 IVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCN 237
++++D+K +L D+ +++DF ++ + +G T L T YLAPE IL+ N
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XLCGTPEYLAPEIILSKGYN 217
Query: 238 EKTDVFCFGMLLLELLTG 255
+ D + G+L+ E+ G
Sbjct: 218 KAVDWWALGVLIYEMAAG 235
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 8/96 (8%)
Query: 160 AMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHML 219
A +I Y+H ++++D+K +L D+ +++DF ++ + +G T L
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XL 199
Query: 220 TRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
T YLAPE IL+ N+ D + G+L+ E+ G
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 8/96 (8%)
Query: 160 AMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHML 219
A +I Y+H ++++D+K +L D+ +++DF ++ + +G T L
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XL 198
Query: 220 TRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
T YLAPE IL+ N+ D + G+L+ E+ G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 8/96 (8%)
Query: 160 AMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHML 219
A +I Y+H ++++D+K +L D+ +++DF ++ + +G T L
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XL 198
Query: 220 TRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
T YLAPE IL+ N+ D + G+L+ E+ G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 78/179 (43%), Gaps = 20/179 (11%)
Query: 98 NNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRL 157
N I ++ H NI+ L LV + V G L DRI G + E +
Sbjct: 69 NEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVE-KGFYTE----KDAS 123
Query: 158 KIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILF---DEYNVAKLSDFSESEYIPEGETHV 214
+ ++ +A+ Y+H R IV +D+K +L+ DE + +SDF S+ +G+
Sbjct: 124 TLIRQVLDAVYYLH---RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMS 180
Query: 215 TSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG------RRDNILLEHVKK 267
T+ T Y+APE + ++ D + G++ LL G D+ L E + K
Sbjct: 181 TA---CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILK 236
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 8/96 (8%)
Query: 160 AMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHML 219
A +I Y+H ++++D+K +L D+ +++DF ++ + +G T L
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XL 198
Query: 220 TRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
T YLAPE IL+ N+ D + G+L+ E+ G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 63/138 (45%), Gaps = 24/138 (17%)
Query: 126 LVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKI--------AMEIGNAMAYIHIGFRRP 177
LV E++ G L D L RHR ++ + +I M Y+ G RR
Sbjct: 91 LVMEYLPSGCLRD------------FLQRHRARLDASRLLLYSSQICKGMEYL--GSRR- 135
Query: 178 IVFKDIKLSQILFDEYNVAKLSDFSESEYIP-EGETHVTSHMLTRTKRYLAPEYILTGLC 236
V +D+ IL + K++DF ++ +P + + +V + APE + +
Sbjct: 136 CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIF 195
Query: 237 NEKTDVFCFGMLLLELLT 254
+ ++DV+ FG++L EL T
Sbjct: 196 SRQSDVWSFGVVLYELFT 213
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 8/96 (8%)
Query: 160 AMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHML 219
A +I Y+H ++++D+K +L D+ +++DF ++ + +G T L
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XL 198
Query: 220 TRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
T YLAPE IL+ N+ D + G+L+ E+ G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 178 IVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCN 237
++++D+K +L D+ +++DF ++ + +G T L T YLAPE IL+ N
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XLCGTPEYLAPEIILSKGYN 216
Query: 238 EKTDVFCFGMLLLELLTG 255
+ D + G+L+ E+ G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 82/177 (46%), Gaps = 11/177 (6%)
Query: 79 ISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLAD 138
I V+K G ++ E I+ Q+++ I++LIG C + E +LV E G L
Sbjct: 42 IKVLKQGTEKADTEEMMREAQIMH--QLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHK 98
Query: 139 RICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKL 198
+ E + + ++ ++ M Y+ + V +D+ +L + AK+
Sbjct: 99 FLVGKR----EEIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKI 151
Query: 199 SDFSESEYIPEGETHVTSHMLTRTK-RYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
SDF S+ + +++ T+ + ++ APE I + ++DV+ +G+ + E L+
Sbjct: 152 SDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALS 208
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 8/96 (8%)
Query: 160 AMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHML 219
A +I Y+H ++++D+K +L D+ +++DF ++ + +G T L
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XL 199
Query: 220 TRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
T YLAPE IL+ N+ D + G+L+ E+ G
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 178 IVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCN 237
++++D+K +L D+ +++DF ++ + +G T L T YLAPE IL+ N
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XLCGTPEYLAPEIILSKGYN 217
Query: 238 EKTDVFCFGMLLLELLTG 255
+ D + G+L+ E+ G
Sbjct: 218 KAVDWWALGVLIYEMAAG 235
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 8/96 (8%)
Query: 160 AMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHML 219
A +I Y+H ++++D+K +L D+ +++DF ++ + +G T L
Sbjct: 140 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XL 191
Query: 220 TRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
T YLAPE IL+ N+ D + G+L+ E+ G
Sbjct: 192 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 8/96 (8%)
Query: 160 AMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHML 219
A +I Y+H ++++D+K +L D+ +++DF ++ + +G T L
Sbjct: 140 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XL 191
Query: 220 TRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
T YLAPE IL+ N+ D + G+L+ E+ G
Sbjct: 192 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 8/96 (8%)
Query: 160 AMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHML 219
A +I Y+H ++++D+K +L D+ +++DF ++ + +G T L
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XL 198
Query: 220 TRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
T YLAPE IL+ N+ D + G+L+ E+ G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 8/96 (8%)
Query: 160 AMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHML 219
A +I Y+H ++++D+K +L D+ +++DF ++ + +G T L
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XL 199
Query: 220 TRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
T YLAPE IL+ N+ D + G+L+ E+ G
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 8/96 (8%)
Query: 160 AMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHML 219
A +I Y+H ++++D+K +L D+ +++DF ++ + +G T L
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XL 198
Query: 220 TRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
T YLAPE IL+ N+ D + G+L+ E+ G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 8/96 (8%)
Query: 160 AMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHML 219
A +I Y+H ++++D+K +L D+ +++DF ++ + +G T L
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XL 198
Query: 220 TRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
T YLAPE IL+ N+ D + G+L+ E+ G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 63/138 (45%), Gaps = 24/138 (17%)
Query: 126 LVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKI--------AMEIGNAMAYIHIGFRRP 177
LV E++ G L D L RHR ++ + +I M Y+ G RR
Sbjct: 103 LVMEYLPSGCLRD------------FLQRHRARLDASRLLLYSSQICKGMEYL--GSRR- 147
Query: 178 IVFKDIKLSQILFDEYNVAKLSDFSESEYIP-EGETHVTSHMLTRTKRYLAPEYILTGLC 236
V +D+ IL + K++DF ++ +P + + +V + APE + +
Sbjct: 148 CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIF 207
Query: 237 NEKTDVFCFGMLLLELLT 254
+ ++DV+ FG++L EL T
Sbjct: 208 SRQSDVWSFGVVLYELFT 225
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 8/96 (8%)
Query: 160 AMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHML 219
A +I Y+H ++++D+K +L D+ +++DF ++ + +G T L
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XL 198
Query: 220 TRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
T YLAPE IL+ N+ D + G+L+ E+ G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 63/138 (45%), Gaps = 24/138 (17%)
Query: 126 LVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKI--------AMEIGNAMAYIHIGFRRP 177
LV E++ G L D L RHR ++ + +I M Y+ G RR
Sbjct: 90 LVMEYLPSGCLRD------------FLQRHRARLDASRLLLYSSQICKGMEYL--GSRR- 134
Query: 178 IVFKDIKLSQILFDEYNVAKLSDFSESEYIP-EGETHVTSHMLTRTKRYLAPEYILTGLC 236
V +D+ IL + K++DF ++ +P + + +V + APE + +
Sbjct: 135 CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIF 194
Query: 237 NEKTDVFCFGMLLLELLT 254
+ ++DV+ FG++L EL T
Sbjct: 195 SRQSDVWSFGVVLYELFT 212
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 8/96 (8%)
Query: 160 AMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHML 219
A +I Y+H ++++D+K +L D+ +++DF ++ + +G T L
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XL 198
Query: 220 TRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
T YLAPE IL+ N+ D + G+L+ E+ G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 8/96 (8%)
Query: 160 AMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHML 219
A +I Y+H ++++D+K +L D+ +++DF ++ + +G T L
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XL 198
Query: 220 TRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
T YLAPE IL+ N+ D + G+L+ E+ G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
EI +A+ Y+H + I+ +D+K IL +E +++DF ++ + ++
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVG 196
Query: 222 TKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
T +Y++PE + ++ +D++ G ++ +L+ G
Sbjct: 197 TAQYVSPELLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 50/99 (50%), Gaps = 6/99 (6%)
Query: 158 KIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSH 217
K+++ + +AY+ + I+ +D+K S IL + KL DF S + ++
Sbjct: 118 KVSIAVLRGLAYLR--EKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQL----IDSMAN 171
Query: 218 MLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTGR 256
T+ Y+APE + + ++D++ G+ L+EL GR
Sbjct: 172 SFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGR 210
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 67/155 (43%), Gaps = 17/155 (10%)
Query: 107 NHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNA 166
H +I+ LI + LVF+ + G L D + L + I + A
Sbjct: 158 GHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVA-----LSEKETRSIMRSLLEA 212
Query: 167 MAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYL 226
++++H IV +D+K IL D+ +LSDF S ++ GE L T YL
Sbjct: 213 VSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGE---KLRELCGTPGYL 266
Query: 227 APEYILTGL------CNEKTDVFCFGMLLLELLTG 255
APE + + ++ D++ G++L LL G
Sbjct: 267 APEILKCSMDETHPGYGKEVDLWACGVILFTLLAG 301
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 72/157 (45%), Gaps = 10/157 (6%)
Query: 105 QMNHRNILKLIGCCIETE------IPILVFEFVEYGTL-ADRICSPHGPHLEPLLWRHRL 157
+ +H ++ KL+G + + IP+++ F+++G L A + S G + L + +
Sbjct: 81 EFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLV 140
Query: 158 KIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSH 217
+ ++I M Y+ R + +D+ + E ++DF S I G+ +
Sbjct: 141 RFMVDIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGC 197
Query: 218 MLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
++LA E + L +DV+ FG+ + E++T
Sbjct: 198 ASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMT 234
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 59/130 (45%), Gaps = 10/130 (7%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
+I + + ++H +R I+++D+K +L D+ ++SD + + G+T +
Sbjct: 297 QIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY--AG 351
Query: 222 TKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTGRRDNILLEHVKKHVENNRLGEIV--D 279
T ++APE +L + D F G+ L E++ R + VEN L + V
Sbjct: 352 TPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP---FRARGEKVENKELKQRVLEQ 408
Query: 280 PIVVEDKSCP 289
+ DK P
Sbjct: 409 AVTYPDKFSP 418
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 59/130 (45%), Gaps = 10/130 (7%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
+I + + ++H +R I+++D+K +L D+ ++SD + + G+T +
Sbjct: 297 QIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY--AG 351
Query: 222 TKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTGRRDNILLEHVKKHVENNRLGEIV--D 279
T ++APE +L + D F G+ L E++ R + VEN L + V
Sbjct: 352 TPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP---FRARGEKVENKELKQRVLEQ 408
Query: 280 PIVVEDKSCP 289
+ DK P
Sbjct: 409 AVTYPDKFSP 418
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 59/130 (45%), Gaps = 10/130 (7%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
+I + + ++H +R I+++D+K +L D+ ++SD + + G+T +
Sbjct: 297 QIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY--AG 351
Query: 222 TKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTGRRDNILLEHVKKHVENNRLGEIV--D 279
T ++APE +L + D F G+ L E++ R + VEN L + V
Sbjct: 352 TPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP---FRARGEKVENKELKQRVLEQ 408
Query: 280 PIVVEDKSCP 289
+ DK P
Sbjct: 409 AVTYPDKFSP 418
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 62/138 (44%), Gaps = 24/138 (17%)
Query: 126 LVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKI--------AMEIGNAMAYIHIGFRRP 177
LV E++ G L D L RHR ++ + +I M Y+ G RR
Sbjct: 87 LVMEYLPSGCLRD------------FLQRHRARLDASRLLLYSSQICKGMEYL--GSRR- 131
Query: 178 IVFKDIKLSQILFDEYNVAKLSDFSESEYIP-EGETHVTSHMLTRTKRYLAPEYILTGLC 236
V +D+ IL + K++DF ++ +P + + V + APE + +
Sbjct: 132 CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIF 191
Query: 237 NEKTDVFCFGMLLLELLT 254
+ ++DV+ FG++L EL T
Sbjct: 192 SRQSDVWSFGVVLYELFT 209
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 178 IVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCN 237
++++D+K ++ D+ +++DF ++ + +G T L T YLAPE IL+ N
Sbjct: 162 LIYRDLKPENLMIDQQGYIQVTDFGLAKRV-KGRTW----XLCGTPEYLAPEIILSKGYN 216
Query: 238 EKTDVFCFGMLLLELLTG 255
+ D + G+L+ E+ G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 75/171 (43%), Gaps = 20/171 (11%)
Query: 93 ENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRI----CSPHGPHL 148
E F ++ A + I+ L G E + E +E G+L + C P L
Sbjct: 110 EVFRAEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRAL 169
Query: 149 EPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFD-EYNVAKLSDFSESEYI 207
+ L A+E + Y+H R I+ D+K +L + + A L DF + +
Sbjct: 170 ------YYLGQALE---GLEYLH---SRRILHGDVKADNVLLSSDGSHAALCDFGHAVCL 217
Query: 208 -PEG--ETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
P+G + +T + T+ ++APE +L C+ K DV+ ++L +L G
Sbjct: 218 QPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 268
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 178 IVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCN 237
++++D+K ++ D+ +++DF ++ + +G T L T YLAPE IL+ N
Sbjct: 162 LIYRDLKPENLMIDQQGYIQVTDFGFAKRV-KGRTW----XLCGTPEYLAPEIILSKGYN 216
Query: 238 EKTDVFCFGMLLLELLTG 255
+ D + G+L+ E+ G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 59/130 (45%), Gaps = 10/130 (7%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
+I + + ++H +R I+++D+K +L D+ ++SD + + G+T +
Sbjct: 297 QIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY--AG 351
Query: 222 TKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTGRRDNILLEHVKKHVENNRLGEIV--D 279
T ++APE +L + D F G+ L E++ R + VEN L + V
Sbjct: 352 TPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP---FRARGEKVENKELKQRVLEQ 408
Query: 280 PIVVEDKSCP 289
+ DK P
Sbjct: 409 AVTYPDKFSP 418
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
EI +A+ Y+H + I+ +D+K IL +E +++DF ++ + ++
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 222 TKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
T +Y++PE + + +D++ G ++ +L+ G
Sbjct: 197 TAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 96/219 (43%), Gaps = 22/219 (10%)
Query: 45 SAGELKIATNNYNGHQVIASEHY---KLYKGFLENRPISVMKFGDNYSENGENF--CFNN 99
SA + + NY + I ++ KL + L R ++V K D N + F
Sbjct: 6 SATDEQPHIGNYRLQKTIGKGNFAKVKLARHVLTGREVAV-KIIDKTQLNPTSLQKLFRE 64
Query: 100 IVFAAQMNHRNILKLIGCCIETEIPI-LVFEFVEYGTLADRICSPHGPHLEPLLWRHRLK 158
+ +NH NI+KL IETE + LV E+ G + D + + HG E R K
Sbjct: 65 VRIMKILNHPNIVKLFE-VIETEKTLYLVMEYASGGEVFDYLVA-HGRMKEK---EARAK 119
Query: 159 IAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHM 218
+I +A+ Y H ++ IV +D+K +L D K++DF S G T
Sbjct: 120 FR-QIVSAVQYCH---QKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDT--- 172
Query: 219 LTRTKRYLAPEYILTG--LCNEKTDVFCFGMLLLELLTG 255
+ Y APE + G + DV+ G++L L++G
Sbjct: 173 FCGSPPYAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 9/96 (9%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
+I + YIH I+ +D+K S + +E + K+ DF + + + +T ++ TR
Sbjct: 135 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLARHT---DDEMTGYVATR 188
Query: 222 TKRYLAPEYILTGL-CNEKTDVFCFGMLLLELLTGR 256
Y APE +L + N+ D++ G ++ ELLTGR
Sbjct: 189 W--YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 9/96 (9%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
+I + YIH I+ +D+K S + +E + K+ DF + + + +T ++ TR
Sbjct: 139 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLARHT---DDEMTGYVATR 192
Query: 222 TKRYLAPEYILTGL-CNEKTDVFCFGMLLLELLTGR 256
Y APE +L + N+ D++ G ++ ELLTGR
Sbjct: 193 W--YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 49/96 (51%), Gaps = 8/96 (8%)
Query: 160 AMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHML 219
A +I Y+H ++++D+K +L D+ +++DF ++ + +G T L
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XL 198
Query: 220 TRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
T YLAPE IL+ N+ D + G+L+ ++ G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Query: 158 KIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSH 217
KIA+ I A+ ++H ++ +D+K S +L + K+ DF S Y+ + V
Sbjct: 157 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDS---VAKT 211
Query: 218 MLTRTKRYLAPEYILTGLCNE----KTDVFCFGMLLLEL 252
+ K Y+APE I L + K+D++ G+ ++EL
Sbjct: 212 IDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIEL 250
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
EI +A+ Y+H + I+ +D+K IL +E +++DF ++ + ++
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 222 TKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
T +Y++PE + + +D++ G ++ +L+ G
Sbjct: 197 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
EI +A+ Y+H + I+ +D+K IL +E +++DF ++ + ++
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 222 TKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
T +Y++PE + + +D++ G ++ +L+ G
Sbjct: 197 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 9/103 (8%)
Query: 158 KIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSH 217
KIA+ I A+ ++H + ++ +D+K S +L + K+ DF S Y+ + V
Sbjct: 113 KIAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVD---DVAKD 167
Query: 218 MLTRTKRYLAPEYILTGLCNE----KTDVFCFGMLLLELLTGR 256
+ K Y+APE I L + K+D++ G+ ++EL R
Sbjct: 168 IDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILR 210
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
EI +A+ Y+H + I+ +D+K IL +E +++DF ++ + ++
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 222 TKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
T +Y++PE + + +D++ G ++ +L+ G
Sbjct: 197 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
EI +A+ Y+H + I+ +D+K IL +E +++DF ++ + ++
Sbjct: 141 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 197
Query: 222 TKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
T +Y++PE + + +D++ G ++ +L+ G
Sbjct: 198 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 85/193 (44%), Gaps = 19/193 (9%)
Query: 68 KLYKGFLENRPISVMKFGDNYSENGENF--CFNNIVFAAQMNHRNILKLIGCCIETEIPI 125
KL + L + ++V K D N + F + +NH NI+KL IETE +
Sbjct: 31 KLARHILTGKEVAV-KIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE-VIETEKTL 88
Query: 126 -LVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIK 184
LV E+ G + D + + HG E R K +I +A+ Y H F IV +D+K
Sbjct: 89 YLVMEYASGGEVFDYLVA-HGRMKEK---EARAKFR-QIVSAVQYCHQKF---IVHRDLK 140
Query: 185 LSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTG--LCNEKTDV 242
+L D K++DF S G T + Y APE + G + DV
Sbjct: 141 AENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPE-LFQGKKYDGPEVDV 196
Query: 243 FCFGMLLLELLTG 255
+ G++L L++G
Sbjct: 197 WSLGVILYTLVSG 209
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
EI +A+ Y+H + I+ +D+K IL +E +++DF ++ + ++
Sbjct: 145 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 201
Query: 222 TKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
T +Y++PE + + +D++ G ++ +L+ G
Sbjct: 202 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 85/193 (44%), Gaps = 19/193 (9%)
Query: 68 KLYKGFLENRPISVMKFGDNYSENGENF--CFNNIVFAAQMNHRNILKLIGCCIETEIPI 125
KL + L + ++V K D N + F + +NH NI+KL IETE +
Sbjct: 31 KLARHILTGKEVAV-KIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE-VIETEKTL 88
Query: 126 -LVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIK 184
LV E+ G + D + + HG E R K +I +A+ Y H F IV +D+K
Sbjct: 89 YLVMEYASGGEVFDYLVA-HGRMKEK---EARAKFR-QIVSAVQYCHQKF---IVHRDLK 140
Query: 185 LSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTG--LCNEKTDV 242
+L D K++DF S G T + Y APE + G + DV
Sbjct: 141 AENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPE-LFQGKKYDGPEVDV 196
Query: 243 FCFGMLLLELLTG 255
+ G++L L++G
Sbjct: 197 WSLGVILYTLVSG 209
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
EI +A+ Y+H + I+ +D+K IL +E +++DF ++ + ++
Sbjct: 138 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVG 194
Query: 222 TKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
T +Y++PE + + +D++ G ++ +L+ G
Sbjct: 195 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
EI +A+ Y+H + I+ +D+K IL +E +++DF ++ + ++
Sbjct: 138 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 194
Query: 222 TKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
T +Y++PE + + +D++ G ++ +L+ G
Sbjct: 195 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
EI +A+ Y+H + I+ +D+K IL +E +++DF ++ + ++
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 222 TKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
T +Y++PE + + +D++ G ++ +L+ G
Sbjct: 197 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
EI +A+ Y+H + I+ +D+K IL +E +++DF ++ + ++
Sbjct: 138 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 194
Query: 222 TKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
T +Y++PE + + +D++ G ++ +L+ G
Sbjct: 195 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 72/168 (42%), Gaps = 28/168 (16%)
Query: 97 FNNIVFAAQMNHRNILKLIGCCIETEIPI-LVFEFVEYGTLADRICSPHGPHLEPLLWRH 155
F + +NH NI+KL IETE + LV E+ G + D + + HG E
Sbjct: 61 FREVRIXKVLNHPNIVKLFE-VIETEKTLYLVXEYASGGEVFDYLVA-HGRXKEK---EA 115
Query: 156 RLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGET--- 212
R K +I +A+ Y H F IV +D+K +L D K++DF S G
Sbjct: 116 RAKF-RQIVSAVQYCHQKF---IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDA 171
Query: 213 -----HVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
+ L + K+Y PE DV+ G++L L++G
Sbjct: 172 FCGAPPYAAPELFQGKKYDGPE----------VDVWSLGVILYTLVSG 209
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
EI +A+ Y+H + I+ +D+K IL +E +++DF ++ + ++
Sbjct: 143 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 199
Query: 222 TKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
T +Y++PE + + +D++ G ++ +L+ G
Sbjct: 200 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
EI +A+ Y+H + I+ +D+K IL +E +++DF ++ + ++
Sbjct: 117 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 173
Query: 222 TKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
T +Y++PE + + +D++ G ++ +L+ G
Sbjct: 174 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 73/162 (45%), Gaps = 16/162 (9%)
Query: 97 FNNIVFAAQMNHRNILKLIGCCIETEIPI-LVFEFVEYGTLADRICSPHGPHLEPLLWRH 155
F + +NH NI+KL IETE + LV E+ G + D + + HG E
Sbjct: 61 FREVRIMKVLNHPNIVKLFE-VIETEKTLYLVMEYASGGEVFDYLVA-HGRMKEK---EA 115
Query: 156 RLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVT 215
R K +I +A+ Y H F IV +D+K +L D K++DF S G T
Sbjct: 116 RAKFR-QIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT 171
Query: 216 SHMLTRTKRYLAPEYILTG--LCNEKTDVFCFGMLLLELLTG 255
+ Y APE + G + DV+ G++L L++G
Sbjct: 172 ---FCGSPPYAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 104/245 (42%), Gaps = 33/245 (13%)
Query: 68 KLYKGFLENRPISVMKFG--DNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIP- 124
++++G ++V F D S E +N ++ + H NIL I + +
Sbjct: 23 EVWRGLWHGESVAVKIFSSRDEQSWFRETEIYNTVL----LRHDNILGFIASDMTSRNSS 78
Query: 125 ---ILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGF-----RR 176
L+ + E+G+L D + LEP L L++A+ +A++H+ +
Sbjct: 79 TQLWLITHYHEHGSLYDFL---QRQTLEPHL---ALRLAVSAACGLAHLHVEIFGTQGKP 132
Query: 177 PIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETH--VTSHMLTRTKRYLAPEYI--- 231
I +D K +L ++D + +G + + ++ TKRY+APE +
Sbjct: 133 AIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEVLDEQ 192
Query: 232 LTGLCNEK---TDVFCFGMLLLELLTGRRDNILLEHVKKH----VENNRLGEIVDPIVVE 284
+ C E TD++ FG++L E+ N ++E + V N+ E + +V
Sbjct: 193 IRTDCFESYKWTDIWAFGLVLWEIARRTIVNGIVEDYRPPFYDVVPNDPSFEDMKKVVCV 252
Query: 285 DKSCP 289
D+ P
Sbjct: 253 DQQTP 257
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
+I + YIH I+ +D+K S + +E K+ DF + + + +T ++ TR
Sbjct: 144 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHT---DDEMTGYVATR 197
Query: 222 TKRYLAPEYILTGL-CNEKTDVFCFGMLLLELLTGR 256
Y APE +L + N+ D++ G ++ ELLTGR
Sbjct: 198 W--YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
EI +A+ Y+H + I+ +D+K IL +E +++DF ++ + ++
Sbjct: 116 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 172
Query: 222 TKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
T +Y++PE + + +D++ G ++ +L+ G
Sbjct: 173 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
+I + YIH I+ +D+K S + +E K+ DF + + + +T ++ TR
Sbjct: 138 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHT---DDEMTGYVATR 191
Query: 222 TKRYLAPEYILTGL-CNEKTDVFCFGMLLLELLTGR 256
Y APE +L + N+ D++ G ++ ELLTGR
Sbjct: 192 W--YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
EI +A+ Y+H + I+ +D+K IL +E +++DF ++ + ++
Sbjct: 122 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 178
Query: 222 TKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
T +Y++PE + + +D++ G ++ +L+ G
Sbjct: 179 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
EI +A+ Y+H + I+ +D+K IL +E +++DF ++ + ++
Sbjct: 115 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 171
Query: 222 TKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
T +Y++PE + + +D++ G ++ +L+ G
Sbjct: 172 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
EI +A+ Y+H + I+ +D+K IL +E +++DF ++ + ++
Sbjct: 118 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 174
Query: 222 TKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
T +Y++PE + + +D++ G ++ +L+ G
Sbjct: 175 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
+I + YIH I+ +D+K S + +E K+ DF + + + +T ++ TR
Sbjct: 138 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHT---DDEMTGYVATR 191
Query: 222 TKRYLAPEYILTGL-CNEKTDVFCFGMLLLELLTGR 256
Y APE +L + N+ D++ G ++ ELLTGR
Sbjct: 192 W--YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
EI +A+ Y+H + I+ +D+K IL +E +++DF ++ + ++
Sbjct: 138 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 194
Query: 222 TKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
T +Y++PE + + +D++ G ++ +L+ G
Sbjct: 195 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
+I + YIH I+ +D+K S + +E K+ DF + + + +T ++ TR
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHT---DDEMTGYVATR 186
Query: 222 TKRYLAPEYILTGL-CNEKTDVFCFGMLLLELLTGR 256
Y APE +L + N+ D++ G ++ ELLTGR
Sbjct: 187 W--YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 85/193 (44%), Gaps = 19/193 (9%)
Query: 68 KLYKGFLENRPISVMKFGDNYSENGENF--CFNNIVFAAQMNHRNILKLIGCCIETEIPI 125
KL + L + ++V K D N + F + +NH NI+KL IETE +
Sbjct: 24 KLARHILTGKEVAV-KIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE-VIETEKTL 81
Query: 126 -LVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIK 184
LV E+ G + D + + HG E R K +I +A+ Y H F IV +D+K
Sbjct: 82 YLVMEYASGGEVFDYLVA-HGWMKEK---EARAKFR-QIVSAVQYCHQKF---IVHRDLK 133
Query: 185 LSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTG--LCNEKTDV 242
+L D K++DF S G T + Y APE + G + DV
Sbjct: 134 AENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPE-LFQGKKYDGPEVDV 189
Query: 243 FCFGMLLLELLTG 255
+ G++L L++G
Sbjct: 190 WSLGVILYTLVSG 202
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
EI +A+ Y+H + I+ +D+K IL +E +++DF ++ + ++
Sbjct: 137 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 193
Query: 222 TKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
T +Y++PE + + +D++ G ++ +L+ G
Sbjct: 194 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
EI +A+ Y+H + I+ +D+K IL +E +++DF ++ + ++
Sbjct: 141 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVG 197
Query: 222 TKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
T +Y++PE + + +D++ G ++ +L+ G
Sbjct: 198 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
+I + YIH I+ +D+K S + +E K+ DF + + + +T ++ TR
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATR 186
Query: 222 TKRYLAPEYILTGL-CNEKTDVFCFGMLLLELLTGR 256
Y APE +L + N+ D++ G ++ ELLTGR
Sbjct: 187 W--YRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 49/96 (51%), Gaps = 8/96 (8%)
Query: 160 AMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHML 219
A +I Y+H ++++D+K ++ D+ +++DF ++ + +G T L
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRV-KGRTW----XL 198
Query: 220 TRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
T YLAPE I++ N+ D + G+L+ E+ G
Sbjct: 199 CGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 68/165 (41%), Gaps = 19/165 (11%)
Query: 95 FCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRI---CSPHGPHLEPL 151
N I+ + + NI+ + + + +V E++ G+L D + C G
Sbjct: 63 LIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEG------ 116
Query: 152 LWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSE-SEYIPEG 210
+ E A+ ++H ++ +DIK IL KL+DF ++ PE
Sbjct: 117 ---QIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 170
Query: 211 ETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
T + T ++APE + K D++ G++ +E++ G
Sbjct: 171 SKRST---MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG 212
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
EI +A+ Y+H + I+ +D+K IL +E +++DF ++ + ++
Sbjct: 137 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVG 193
Query: 222 TKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
T +Y++PE + + +D++ G ++ +L+ G
Sbjct: 194 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Query: 159 IAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHM 218
I + N+ +YIH + I +D+K S IL D+ KLSDF ESEY+ + + +
Sbjct: 156 IIKSVLNSFSYIHN--EKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKGSRG- 212
Query: 219 LTRTKRYLAPEYIL--TGLCNEKTDVFCFGMLL 249
T ++ PE+ + K D++ G+ L
Sbjct: 213 ---TYEFMPPEFFSNESSYNGAKVDIWSLGICL 242
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
+I + YIH I+ +D+K S + +E + K+ DF + + +T ++ TR
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLCRHT---DDEMTGYVATR 186
Query: 222 TKRYLAPEYILTGL-CNEKTDVFCFGMLLLELLTGR 256
Y APE +L + N+ D++ G ++ ELLTGR
Sbjct: 187 W--YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 8/96 (8%)
Query: 160 AMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHML 219
A +I Y+H ++++D+K +L D+ +++DF ++ + +G T L
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XL 198
Query: 220 TRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
T YLAP IL+ N+ D + G+L+ E+ G
Sbjct: 199 CGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 90/199 (45%), Gaps = 31/199 (15%)
Query: 68 KLYKGFLENRPISVMKFGDNYSENGENF--CFNNIVFAAQMNHRNILKLIGCCIETEIPI 125
KL + L R +++ K D N + F + +NH NI+KL IETE +
Sbjct: 29 KLARHILTGREVAI-KIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV-IETEKTL 86
Query: 126 -LVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIK 184
L+ E+ G + D + + HG ++ R + + +I +A+ Y H ++ IV +D+K
Sbjct: 87 YLIMEYASGGEVFDYLVA-HG-RMKEKEARSKFR---QIVSAVQYCH---QKRIVHRDLK 138
Query: 185 LSQILFDEYNVAKLSDFSES-EYIPEGETHV-------TSHMLTRTKRYLAPEYILTGLC 236
+L D K++DF S E+ G+ + L + K+Y PE
Sbjct: 139 AENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKKYDGPE------- 191
Query: 237 NEKTDVFCFGMLLLELLTG 255
DV+ G++L L++G
Sbjct: 192 ---VDVWSLGVILYTLVSG 207
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 90/199 (45%), Gaps = 31/199 (15%)
Query: 68 KLYKGFLENRPISVMKFGDNYSENGENF--CFNNIVFAAQMNHRNILKLIGCCIETEIPI 125
KL + L R +++ K D N + F + +NH NI+KL IETE +
Sbjct: 32 KLARHILTGREVAI-KIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV-IETEKTL 89
Query: 126 -LVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIK 184
L+ E+ G + D + + HG ++ R + + +I +A+ Y H ++ IV +D+K
Sbjct: 90 YLIMEYASGGEVFDYLVA-HG-RMKEKEARSKFR---QIVSAVQYCH---QKRIVHRDLK 141
Query: 185 LSQILFDEYNVAKLSDFSES-EYIPEGETHV-------TSHMLTRTKRYLAPEYILTGLC 236
+L D K++DF S E+ G+ + L + K+Y PE
Sbjct: 142 AENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPE------- 194
Query: 237 NEKTDVFCFGMLLLELLTG 255
DV+ G++L L++G
Sbjct: 195 ---VDVWSLGVILYTLVSG 210
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 16/170 (9%)
Query: 90 ENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLE 149
E E N I ++ H NI+ L L+ + V G L DRI G + E
Sbjct: 57 EGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVE-KGFYTE 115
Query: 150 PLLWRHRLKIAMEIGNAMAYIH-IGFRRPIVFKDIKLSQILF---DEYNVAKLSDFSESE 205
R ++ ++ +A+ Y+H +G IV +D+K +L+ DE + +SDF S+
Sbjct: 116 ----RDASRLIFQVLDAVKYLHDLG----IVHRDLKPENLLYYSLDEDSKIMISDFGLSK 167
Query: 206 YIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
G T+ T Y+APE + ++ D + G++ LL G
Sbjct: 168 MEDPGSVLSTA---CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 84/199 (42%), Gaps = 31/199 (15%)
Query: 68 KLYKGFLENRPISVMKFGDNYSENGENF--CFNNIVFAAQMNHRNILKLIGCCIETEIPI 125
KL + L + ++V K D N + F + +NH NI+KL IETE +
Sbjct: 31 KLARHILTGKEVAV-KIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE-VIETEKTL 88
Query: 126 -LVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIK 184
LV E+ G + D + + HG E R K +I +A+ Y H F IV +D+K
Sbjct: 89 YLVMEYASGGEVFDYLVA-HGRMKEK---EARAKFR-QIVSAVQYCHQKF---IVHRDLK 140
Query: 185 LSQILFDEYNVAKLSDFSESEYIPEGET--------HVTSHMLTRTKRYLAPEYILTGLC 236
+L D K++DF S G + L + K+Y PE
Sbjct: 141 AENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPE------- 193
Query: 237 NEKTDVFCFGMLLLELLTG 255
DV+ G++L L++G
Sbjct: 194 ---VDVWSLGVILYTLVSG 209
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 72/168 (42%), Gaps = 28/168 (16%)
Query: 97 FNNIVFAAQMNHRNILKLIGCCIETEIPI-LVFEFVEYGTLADRICSPHGPHLEPLLWRH 155
F + +NH NI+KL IETE + LV E+ G + D + + HG E
Sbjct: 61 FREVRIMKVLNHPNIVKLFE-VIETEKTLYLVMEYASGGEVFDYLVA-HGRMKEK---EA 115
Query: 156 RLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPE------ 209
R K +I +A+ Y H F IV +D+K +L D K++DF S
Sbjct: 116 RAKFR-QIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDE 171
Query: 210 --GETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
G + L + K+Y PE DV+ G++L L++G
Sbjct: 172 FCGSPPYAAPELFQGKKYDGPE----------VDVWSLGVILYTLVSG 209
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 16/170 (9%)
Query: 90 ENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLE 149
E E N I ++ H NI+ L L+ + V G L DRI G + E
Sbjct: 57 EGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVE-KGFYTE 115
Query: 150 PLLWRHRLKIAMEIGNAMAYIH-IGFRRPIVFKDIKLSQILF---DEYNVAKLSDFSESE 205
R ++ ++ +A+ Y+H +G IV +D+K +L+ DE + +SDF S+
Sbjct: 116 ----RDASRLIFQVLDAVKYLHDLG----IVHRDLKPENLLYYSLDEDSKIMISDFGLSK 167
Query: 206 YIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
G T+ T Y+APE + ++ D + G++ LL G
Sbjct: 168 MEDPGSVLSTA---CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 76/168 (45%), Gaps = 14/168 (8%)
Query: 97 FNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRI--CSPHGPHLEPLLWR 154
I +Q +H NI+ + + LV + + G++ D I G H +L
Sbjct: 61 LKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDE 120
Query: 155 HRLK-IAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETH 213
+ I E+ + Y+H + + +D+K IL E +++DF S ++ G
Sbjct: 121 STIATILREVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATG-GD 176
Query: 214 VTSHMLTR----TKRYLAPEYI--LTGLCNEKTDVFCFGMLLLELLTG 255
+T + + + T ++APE + + G + K D++ FG+ +EL TG
Sbjct: 177 ITRNKVRKTFVGTPCWMAPEVMEQVRGY-DFKADIWSFGITAIELATG 223
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
+I + YIH I+ +D+K S + +E K+ DF + + + +T ++ TR
Sbjct: 153 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATR 206
Query: 222 TKRYLAPEYILTGL-CNEKTDVFCFGMLLLELLTGR 256
Y APE +L + N+ D++ G ++ ELLTGR
Sbjct: 207 W--YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
+I + YIH I+ +D+K S + +E K+ DF + + + +T ++ TR
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATR 186
Query: 222 TKRYLAPEYILTGL-CNEKTDVFCFGMLLLELLTGR 256
Y APE +L + N+ D++ G ++ ELLTGR
Sbjct: 187 W--YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
+I + YIH I+ +D+K S + +E K+ DF + + + +T ++ TR
Sbjct: 143 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATR 196
Query: 222 TKRYLAPEYILTGL-CNEKTDVFCFGMLLLELLTGR 256
Y APE +L + N+ D++ G ++ ELLTGR
Sbjct: 197 W--YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
+I + YIH I+ +D+K S + +E K+ DF + + + +T ++ TR
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATR 186
Query: 222 TKRYLAPEYILTGL-CNEKTDVFCFGMLLLELLTGR 256
Y APE +L + N+ D++ G ++ ELLTGR
Sbjct: 187 W--YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 16/170 (9%)
Query: 90 ENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLE 149
E E N I ++ H NI+ L L+ + V G L DRI G + E
Sbjct: 57 EGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVE-KGFYTE 115
Query: 150 PLLWRHRLKIAMEIGNAMAYIH-IGFRRPIVFKDIKLSQILF---DEYNVAKLSDFSESE 205
R ++ ++ +A+ Y+H +G IV +D+K +L+ DE + +SDF S+
Sbjct: 116 ----RDASRLIFQVLDAVKYLHDLG----IVHRDLKPENLLYYSLDEDSKIMISDFGLSK 167
Query: 206 YIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
G T+ T Y+APE + ++ D + G++ LL G
Sbjct: 168 MEDPGSVLSTA---CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
+I + YIH I+ +D+K S + +E K+ DF + + + +T ++ TR
Sbjct: 152 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATR 205
Query: 222 TKRYLAPEYILTGL-CNEKTDVFCFGMLLLELLTGR 256
Y APE +L + N+ D++ G ++ ELLTGR
Sbjct: 206 W--YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
+I + YIH I+ +D+K S + +E K+ DF + + + +T ++ TR
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATR 186
Query: 222 TKRYLAPEYILTGL-CNEKTDVFCFGMLLLELLTGR 256
Y APE +L + N+ D++ G ++ ELLTGR
Sbjct: 187 W--YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
+I + YIH I+ +D+K S + +E K+ DF + + + +T ++ TR
Sbjct: 129 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATR 182
Query: 222 TKRYLAPEYILTGL-CNEKTDVFCFGMLLLELLTGR 256
Y APE +L + N+ D++ G ++ ELLTGR
Sbjct: 183 W--YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
+I + YIH I+ +D+K S + +E K+ DF + + + +T ++ TR
Sbjct: 138 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATR 191
Query: 222 TKRYLAPEYILTGL-CNEKTDVFCFGMLLLELLTGR 256
Y APE +L + N+ D++ G ++ ELLTGR
Sbjct: 192 W--YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
+I + YIH I+ +D+K S + +E K+ DF + + + +T ++ TR
Sbjct: 144 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATR 197
Query: 222 TKRYLAPEYILTGL-CNEKTDVFCFGMLLLELLTGR 256
Y APE +L + N+ D++ G ++ ELLTGR
Sbjct: 198 W--YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
+I + YIH I+ +D+K S + +E K+ DF + + + +T ++ TR
Sbjct: 132 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATR 185
Query: 222 TKRYLAPEYILTGL-CNEKTDVFCFGMLLLELLTGR 256
Y APE +L + N+ D++ G ++ ELLTGR
Sbjct: 186 W--YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
+I + YIH I+ +D+K S + +E K+ DF + + + +T ++ TR
Sbjct: 139 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATR 192
Query: 222 TKRYLAPEYILTGL-CNEKTDVFCFGMLLLELLTGR 256
Y APE +L + N+ D++ G ++ ELLTGR
Sbjct: 193 W--YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
+I + YIH I+ +D+K S + +E K+ DF + + + +T ++ TR
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATR 186
Query: 222 TKRYLAPEYILTGL-CNEKTDVFCFGMLLLELLTGR 256
Y APE +L + N+ D++ G ++ ELLTGR
Sbjct: 187 W--YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
+I + YIH I+ +D+K S + +E K+ DF + + + +T ++ TR
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATR 186
Query: 222 TKRYLAPEYILTGL-CNEKTDVFCFGMLLLELLTGR 256
Y APE +L + N+ D++ G ++ ELLTGR
Sbjct: 187 W--YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
+I + YIH I+ +D+K S + +E K+ DF + + + +T ++ TR
Sbjct: 135 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATR 188
Query: 222 TKRYLAPEYILTGL-CNEKTDVFCFGMLLLELLTGR 256
Y APE +L + N+ D++ G ++ ELLTGR
Sbjct: 189 W--YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
+I + YIH I+ +D+K S + +E K+ DF + + + +T ++ TR
Sbjct: 153 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATR 206
Query: 222 TKRYLAPEYILTGL-CNEKTDVFCFGMLLLELLTGR 256
Y APE +L + N+ D++ G ++ ELLTGR
Sbjct: 207 W--YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
+I + YIH I+ +D+K S + +E K+ DF + + + +T ++ TR
Sbjct: 145 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATR 198
Query: 222 TKRYLAPEYILTGL-CNEKTDVFCFGMLLLELLTGR 256
Y APE +L + N+ D++ G ++ ELLTGR
Sbjct: 199 W--YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
+I + YIH I+ +D+K S + +E K+ DF + + + +T ++ TR
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATR 186
Query: 222 TKRYLAPEYILTGL-CNEKTDVFCFGMLLLELLTGR 256
Y APE +L + N+ D++ G ++ ELLTGR
Sbjct: 187 W--YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
+I + YIH I+ +D+K S + +E K+ DF + + + +T ++ TR
Sbjct: 145 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATR 198
Query: 222 TKRYLAPEYILTGL-CNEKTDVFCFGMLLLELLTGR 256
Y APE +L + N+ D++ G ++ ELLTGR
Sbjct: 199 W--YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
+I + YIH I+ +D+K S + +E K+ DF + + + +T ++ TR
Sbjct: 145 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATR 198
Query: 222 TKRYLAPEYILTGL-CNEKTDVFCFGMLLLELLTGR 256
Y APE +L + N+ D++ G ++ ELLTGR
Sbjct: 199 W--YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
+I + YIH I+ +D+K S + +E K+ DF + + + +T ++ TR
Sbjct: 139 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATR 192
Query: 222 TKRYLAPEYILTGL-CNEKTDVFCFGMLLLELLTGR 256
Y APE +L + N+ D++ G ++ ELLTGR
Sbjct: 193 W--YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 86/208 (41%), Gaps = 37/208 (17%)
Query: 77 RPISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTL 136
R I ++K + + + + Q++H NI+KL + LV E G L
Sbjct: 49 RAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGEL 108
Query: 137 ADRICSPHGPHLEPLLWRHRLK------IAMEIGNAMAYIHIGFRRPIVFKDIKLSQILF 190
D I + R + I ++ + Y+H + IV +D+K +L
Sbjct: 109 FDEI-----------ILRQKFSEVDAAVIMKQVLSGTTYLH---KHNIVHRDLKPENLLL 154
Query: 191 DEYN---VAKLSDFSESEYIPEGETHVTSHMLTR--TKRYLAPEYILTGLCNEKTDVFCF 245
+ + + K+ DF S + V M R T Y+APE +L +EK DV+
Sbjct: 155 ESKSRDALIKIVDFGLSAHF-----EVGGKMKERLGTAYYIAPE-VLRKKYDEKCDVWSC 208
Query: 246 GMLLLELL------TGRRDNILLEHVKK 267
G++L LL G+ D +L+ V+K
Sbjct: 209 GVILYILLCGYPPFGGQTDQEILKRVEK 236
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
+I + YIH I+ +D+K S + +E K+ DF + + + +T ++ TR
Sbjct: 152 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATR 205
Query: 222 TKRYLAPEYILTGL-CNEKTDVFCFGMLLLELLTGR 256
Y APE +L + N+ D++ G ++ ELLTGR
Sbjct: 206 W--YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
+I + YIH I+ +D+K S + +E K+ DF + + + +T ++ TR
Sbjct: 135 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATR 188
Query: 222 TKRYLAPEYILTGL-CNEKTDVFCFGMLLLELLTGR 256
Y APE +L + N+ D++ G ++ ELLTGR
Sbjct: 189 W--YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
+I + YIH I+ +D+K S + +E K+ DF + + + +T ++ TR
Sbjct: 129 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATR 182
Query: 222 TKRYLAPEYILTGL-CNEKTDVFCFGMLLLELLTGR 256
Y APE +L + N+ D++ G ++ ELLTGR
Sbjct: 183 W--YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
+I + YIH I+ +D+K S + +E K+ DF + + + +T ++ TR
Sbjct: 156 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATR 209
Query: 222 TKRYLAPEYILTGL-CNEKTDVFCFGMLLLELLTGR 256
Y APE +L + N+ D++ G ++ ELLTGR
Sbjct: 210 W--YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 9/96 (9%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
+I + YIH I+ +D+K S + +E K+ DF + + + T +
Sbjct: 140 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVA----- 191
Query: 222 TKRYLAPEYILTGL-CNEKTDVFCFGMLLLELLTGR 256
T+ Y APE +L + N+ D++ G ++ ELLTGR
Sbjct: 192 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
+I + YIH I+ +D+K S + +E K+ DF + + + +T ++ TR
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATR 186
Query: 222 TKRYLAPEYILTGL-CNEKTDVFCFGMLLLELLTGR 256
Y APE +L + N+ D++ G ++ ELLTGR
Sbjct: 187 W--YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
+I + YIH I+ +D+K S + +E K+ DF + + + +T ++ TR
Sbjct: 138 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATR 191
Query: 222 TKRYLAPEYILTGL-CNEKTDVFCFGMLLLELLTGR 256
Y APE +L + N+ D++ G ++ ELLTGR
Sbjct: 192 W--YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 46/103 (44%), Gaps = 13/103 (12%)
Query: 161 MEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLT 220
+ + A H+ I+ +DIK S IL D KL DF S + V S T
Sbjct: 130 ITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQL------VDSIAKT 183
Query: 221 RT---KRYLAPEYILTGLCNE----KTDVFCFGMLLLELLTGR 256
R + Y+APE I + ++DV+ G+ L EL TGR
Sbjct: 184 RDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGR 226
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
+I + YIH I+ +D+K S + +E K+ DF + + + +T ++ TR
Sbjct: 135 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATR 188
Query: 222 TKRYLAPEYILTGL-CNEKTDVFCFGMLLLELLTGR 256
Y APE +L + N+ D++ G ++ ELLTGR
Sbjct: 189 W--YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
+I + YIH I+ +D+K S + +E K+ DF + + + +T ++ TR
Sbjct: 130 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATR 183
Query: 222 TKRYLAPEYILTGL-CNEKTDVFCFGMLLLELLTGR 256
Y APE +L + N+ D++ G ++ ELLTGR
Sbjct: 184 W--YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
+I + YIH I+ +D+K S + +E K+ DF + + + +T ++ TR
Sbjct: 131 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATR 184
Query: 222 TKRYLAPEYILTGL-CNEKTDVFCFGMLLLELLTGR 256
Y APE +L + N+ D++ G ++ ELLTGR
Sbjct: 185 W--YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
+I + YIH I+ +D+K S + +E K+ DF + + + +T ++ TR
Sbjct: 140 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATR 193
Query: 222 TKRYLAPEYILTGL-CNEKTDVFCFGMLLLELLTGR 256
Y APE +L + N+ D++ G ++ ELLTGR
Sbjct: 194 W--YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
+I + YIH I+ +D+K S + +E K+ DF + + + +T ++ TR
Sbjct: 129 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATR 182
Query: 222 TKRYLAPEYILTGL-CNEKTDVFCFGMLLLELLTGR 256
Y APE +L + N+ D++ G ++ ELLTGR
Sbjct: 183 W--YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
+I + YIH I+ +D+K S + +E K+ DF + + + +T ++ TR
Sbjct: 139 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATR 192
Query: 222 TKRYLAPEYILTGL-CNEKTDVFCFGMLLLELLTGR 256
Y APE +L + N+ D++ G ++ ELLTGR
Sbjct: 193 W--YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
+I + YIH I+ +D+K S + +E K+ DF + + + +T ++ TR
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATR 186
Query: 222 TKRYLAPEYILTGL-CNEKTDVFCFGMLLLELLTGR 256
Y APE +L + N+ D++ G ++ ELLTGR
Sbjct: 187 W--YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 9/96 (9%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
+I + YIH I+ +D+K S + +E K+ DF + + + T +
Sbjct: 140 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVA----- 191
Query: 222 TKRYLAPEYILTGL-CNEKTDVFCFGMLLLELLTGR 256
T+ Y APE +L + N+ D++ G ++ ELLTGR
Sbjct: 192 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 9/96 (9%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
+I + YIH I+ +D+K S + +E K+ DF + + + T +
Sbjct: 140 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVA----- 191
Query: 222 TKRYLAPEYILTGL-CNEKTDVFCFGMLLLELLTGR 256
T+ Y APE +L + N+ D++ G ++ ELLTGR
Sbjct: 192 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
+I + YIH I+ +D+K S + +E K+ DF + + + +T ++ TR
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATR 186
Query: 222 TKRYLAPEYILTGL-CNEKTDVFCFGMLLLELLTGR 256
Y APE +L + N+ D++ G ++ ELLTGR
Sbjct: 187 W--YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 72/169 (42%), Gaps = 14/169 (8%)
Query: 90 ENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLE 149
E E N I ++ H NI+ L L+ + V G L DRI G + E
Sbjct: 57 EGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVE-KGFYTE 115
Query: 150 PLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILF---DEYNVAKLSDFSESEY 206
R ++ ++ +A+ Y+H IV +D+K +L+ DE + +SDF S+
Sbjct: 116 ----RDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM 168
Query: 207 IPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
G T+ T Y+APE + ++ D + G++ LL G
Sbjct: 169 EDPGSVLSTA---CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
+I + YIH I+ +D+K S + +E K+ DF + + + +T ++ TR
Sbjct: 130 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATR 183
Query: 222 TKRYLAPEYILTGL-CNEKTDVFCFGMLLLELLTGR 256
Y APE +L + N+ D++ G ++ ELLTGR
Sbjct: 184 W--YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 76/168 (45%), Gaps = 14/168 (8%)
Query: 97 FNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRI--CSPHGPHLEPLLWR 154
I +Q +H NI+ + + LV + + G++ D I G H +L
Sbjct: 56 LKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDE 115
Query: 155 HRLK-IAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETH 213
+ I E+ + Y+H + + +D+K IL E +++DF S ++ G
Sbjct: 116 STIATILREVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATG-GD 171
Query: 214 VTSHMLTR----TKRYLAPEYI--LTGLCNEKTDVFCFGMLLLELLTG 255
+T + + + T ++APE + + G + K D++ FG+ +EL TG
Sbjct: 172 ITRNKVRKTFVGTPCWMAPEVMEQVRGY-DFKADIWSFGITAIELATG 218
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 9/96 (9%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
+I + YIH I+ +D+K S + +E K+ DF + + + T +
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXVA----- 184
Query: 222 TKRYLAPEYILTGL-CNEKTDVFCFGMLLLELLTGR 256
T+ Y APE +L + N+ D++ G ++ ELLTGR
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 7/96 (7%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
+I +A+ Y H R IV +D+K +L DE+ K++DF S + +G TS
Sbjct: 120 QIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS---CG 173
Query: 222 TKRYLAPEYILTGL-CNEKTDVFCFGMLLLELLTGR 256
+ Y APE I L + DV+ G++L +L R
Sbjct: 174 SPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRR 209
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 7/96 (7%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
+I +A+ Y H R IV +D+K +L DE+ K++DF S + +G TS
Sbjct: 111 QIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS---CG 164
Query: 222 TKRYLAPEYILTGL-CNEKTDVFCFGMLLLELLTGR 256
+ Y APE I L + DV+ G++L +L R
Sbjct: 165 SPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRR 200
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 7/96 (7%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
+I +A+ Y H R IV +D+K +L DE+ K++DF S + +G TS
Sbjct: 121 QIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS---CG 174
Query: 222 TKRYLAPEYILTGL-CNEKTDVFCFGMLLLELLTGR 256
+ Y APE I L + DV+ G++L +L R
Sbjct: 175 SPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRR 210
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 7/96 (7%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
+I +A+ Y H R IV +D+K +L DE+ K++DF S + +G TS
Sbjct: 115 QIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS---CG 168
Query: 222 TKRYLAPEYILTGL-CNEKTDVFCFGMLLLELLTGR 256
+ Y APE I L + DV+ G++L +L R
Sbjct: 169 SPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRR 204
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/248 (19%), Positives = 104/248 (41%), Gaps = 34/248 (13%)
Query: 8 TKNQEKVDKKTFLRNGKILLEKLIISCDGKRNPIRSFSAGELKIATNNYNGHQVIASEHY 67
+ +E DKK FL+ +L+ + + C + G ++ Q+ +
Sbjct: 320 SDPEELKDKKLFLKRDNLLIADIELGCG---------NFGSVRQGVYRMRKKQIDVA--- 367
Query: 68 KLYKGFLENRPISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILV 127
I V+K G ++ E I+ Q+++ I++LIG C + E +LV
Sbjct: 368 -----------IKVLKQGTEKADTEEMMREAQIMH--QLDNPYIVRLIGVC-QAEALMLV 413
Query: 128 FEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQ 187
E G L + E + + ++ ++ M Y+ + V +++
Sbjct: 414 MEMAGGGPLHKFLVGKR----EEIPVSNVAELLHQVSMGMKYLE---EKNFVHRNLAARN 466
Query: 188 ILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTK-RYLAPEYILTGLCNEKTDVFCFG 246
+L + AK+SDF S+ + +++ T+ + ++ APE I + ++DV+ +G
Sbjct: 467 VLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYG 526
Query: 247 MLLLELLT 254
+ + E L+
Sbjct: 527 VTMWEALS 534
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 86/208 (41%), Gaps = 37/208 (17%)
Query: 77 RPISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTL 136
R I ++K + + + + Q++H NI+KL + LV E G L
Sbjct: 32 RAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGEL 91
Query: 137 ADRICSPHGPHLEPLLWRHRLK------IAMEIGNAMAYIHIGFRRPIVFKDIKLSQILF 190
D I + R + I ++ + Y+H + IV +D+K +L
Sbjct: 92 FDEI-----------ILRQKFSEVDAAVIMKQVLSGTTYLH---KHNIVHRDLKPENLLL 137
Query: 191 DEYN---VAKLSDFSESEYIPEGETHVTSHMLTR--TKRYLAPEYILTGLCNEKTDVFCF 245
+ + + K+ DF S + V M R T Y+APE +L +EK DV+
Sbjct: 138 ESKSRDALIKIVDFGLSAHF-----EVGGKMKERLGTAYYIAPE-VLRKKYDEKCDVWSC 191
Query: 246 GMLLLELL------TGRRDNILLEHVKK 267
G++L LL G+ D +L+ V+K
Sbjct: 192 GVILYILLCGYPPFGGQTDQEILKRVEK 219
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 93/218 (42%), Gaps = 29/218 (13%)
Query: 68 KLYKGFLENRPISVMKFG--DNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIP- 124
++++G + ++V F D S E +N ++ + H NIL I + +
Sbjct: 23 EVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVM----LRHENILGFIASDMTSRHSS 78
Query: 125 ---ILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGF-----RR 176
L+ + E G+L D + L L L+I + I + +A++HI +
Sbjct: 79 TQLWLITHYHEMGSLYDYL------QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP 132
Query: 177 PIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEG--ETHVTSHMLTRTKRYLAPEYILTG 234
I +D+K IL + ++D + + + V ++ TKRY+APE +
Sbjct: 133 AIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDET 192
Query: 235 L------CNEKTDVFCFGMLLLELLTGRRDNILLEHVK 266
+ ++ D++ FG++L E+ N ++E K
Sbjct: 193 IQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYK 230
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 29/161 (18%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRL------K 158
Q++H NI+KL + LV E G L D I S R R +
Sbjct: 88 QLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIIS-----------RKRFSEVDAAR 136
Query: 159 IAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFD----EYNVAKLSDFSESEYIPEGETHV 214
I ++ + + Y+H + IV +D+K +L + + N+ ++ DF S + E +
Sbjct: 137 IIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANI-RIIDFGLSTHF-EASKKM 191
Query: 215 TSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
+ T Y+APE +L G +EK DV+ G++L LL+G
Sbjct: 192 KDKI--GTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 229
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
+I + YIH I+ +D+K S + +E K+ DF + + + +T ++ TR
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFYLARHT---DDEMTGYVATR 186
Query: 222 TKRYLAPEYILTGL-CNEKTDVFCFGMLLLELLTGR 256
Y APE +L + N+ D++ G ++ ELLTGR
Sbjct: 187 W--YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 93/218 (42%), Gaps = 29/218 (13%)
Query: 68 KLYKGFLENRPISVMKFG--DNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIP- 124
++++G + ++V F D S E +N ++ + H NIL I + +
Sbjct: 23 EVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVM----LRHENILGFIASDMTSRHSS 78
Query: 125 ---ILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGF-----RR 176
L+ + E G+L D + L L L+I + I + +A++HI +
Sbjct: 79 TQLWLITHYHEMGSLYDYL------QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP 132
Query: 177 PIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEG--ETHVTSHMLTRTKRYLAPEYILTG 234
I +D+K IL + ++D + + + V ++ TKRY+APE +
Sbjct: 133 AIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDET 192
Query: 235 L------CNEKTDVFCFGMLLLELLTGRRDNILLEHVK 266
+ ++ D++ FG++L E+ N ++E K
Sbjct: 193 IQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYK 230
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 33/163 (20%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRL------K 158
Q++H NI+KL + LV E G L D I S R R +
Sbjct: 106 QLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIIS-----------RKRFSEVDAAR 154
Query: 159 IAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFD----EYNVAKLSDFSESEYIPEGETHV 214
I ++ + + Y+H + IV +D+K +L + + N+ ++ DF S +
Sbjct: 155 IIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANI-RIIDFGLSTHF-----EA 205
Query: 215 TSHMLTR--TKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
+ M + T Y+APE +L G +EK DV+ G++L LL+G
Sbjct: 206 SKKMKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 247
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 8/96 (8%)
Query: 160 AMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHML 219
A +I Y+H ++++D+K +L D+ +++DF ++ + +G T L
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XL 198
Query: 220 TRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
T LAPE IL+ N+ D + G+L+ E+ G
Sbjct: 199 CGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 33/163 (20%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRL------K 158
Q++H NI+KL + LV E G L D I S R R +
Sbjct: 105 QLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIIS-----------RKRFSEVDAAR 153
Query: 159 IAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFD----EYNVAKLSDFSESEYIPEGETHV 214
I ++ + + Y+H + IV +D+K +L + + N+ ++ DF S +
Sbjct: 154 IIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANI-RIIDFGLSTHF-----EA 204
Query: 215 TSHMLTR--TKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
+ M + T Y+APE +L G +EK DV+ G++L LL+G
Sbjct: 205 SKKMKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 246
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 67/165 (40%), Gaps = 19/165 (11%)
Query: 95 FCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRI---CSPHGPHLEPL 151
N I+ + + NI+ + + + +V E++ G+L D + C G
Sbjct: 63 LIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEG------ 116
Query: 152 LWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSE-SEYIPEG 210
+ E A+ ++H ++ +DIK IL KL+DF ++ PE
Sbjct: 117 ---QIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE- 169
Query: 211 ETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
+ T ++APE + K D++ G++ +E++ G
Sbjct: 170 --QSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG 212
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 67/165 (40%), Gaps = 19/165 (11%)
Query: 95 FCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRI---CSPHGPHLEPL 151
N I+ + + NI+ + + + +V E++ G+L D + C G
Sbjct: 64 LIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEG------ 117
Query: 152 LWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSE-SEYIPEG 210
+ E A+ ++H ++ +DIK IL KL+DF ++ PE
Sbjct: 118 ---QIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE- 170
Query: 211 ETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
+ T ++APE + K D++ G++ +E++ G
Sbjct: 171 --QSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG 213
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 64/131 (48%), Gaps = 11/131 (8%)
Query: 126 LVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKL 185
+ E ++ G+L D++ G E +L K+++ + + Y+ + I+ +D+K
Sbjct: 100 ICMEHMDGGSL-DQVLKKAGRIPEQILG----KVSIAVIKGLTYLR--EKHKIMHRDVKP 152
Query: 186 SQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCF 245
S IL + KL DF S + + ++ T+ Y++PE + + ++D++
Sbjct: 153 SNILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYSVQSDIWSM 208
Query: 246 GMLLLELLTGR 256
G+ L+E+ GR
Sbjct: 209 GLSLVEMAVGR 219
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 93/218 (42%), Gaps = 29/218 (13%)
Query: 68 KLYKGFLENRPISVMKFG--DNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIP- 124
++++G + ++V F D S E +N ++ + H NIL I + +
Sbjct: 52 EVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVM----LRHENILGFIASDMTSRHSS 107
Query: 125 ---ILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGF-----RR 176
L+ + E G+L D + L L L+I + I + +A++HI +
Sbjct: 108 TQLWLITHYHEMGSLYDYL------QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP 161
Query: 177 PIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEG--ETHVTSHMLTRTKRYLAPEYILTG 234
I +D+K IL + ++D + + + V ++ TKRY+APE +
Sbjct: 162 AIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDET 221
Query: 235 L------CNEKTDVFCFGMLLLELLTGRRDNILLEHVK 266
+ ++ D++ FG++L E+ N ++E K
Sbjct: 222 IQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYK 259
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/164 (20%), Positives = 67/164 (40%), Gaps = 17/164 (10%)
Query: 95 FCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRI---CSPHGPHLEPL 151
N I+ + + NI+ + + + +V E++ G+L D + C G
Sbjct: 63 LIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEG------ 116
Query: 152 LWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGE 211
+ E A+ ++H ++ +DIK IL KL+DF I +
Sbjct: 117 ---QIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 170
Query: 212 THVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
+ + + T ++APE + K D++ G++ +E++ G
Sbjct: 171 SKRSE--MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG 212
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 29/161 (18%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRL------K 158
Q++H NI+KL + LV E G L D I S R R +
Sbjct: 82 QLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIIS-----------RKRFSEVDAAR 130
Query: 159 IAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFD----EYNVAKLSDFSESEYIPEGETHV 214
I ++ + + Y+H + IV +D+K +L + + N+ ++ DF S + E +
Sbjct: 131 IIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANI-RIIDFGLSTHF-EASKKM 185
Query: 215 TSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
+ T Y+APE +L G +EK DV+ G++L LL+G
Sbjct: 186 KDKI--GTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 61/135 (45%), Gaps = 16/135 (11%)
Query: 126 LVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKL 185
+V E++ G L + + + P + + +A++ ++M IH +D+K
Sbjct: 152 MVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIH---------RDVKP 202
Query: 186 SQILFDEYNVAKLSDFSESEYIPE-GETHVTSHMLTRTKRYLAPEYILT----GLCNEKT 240
+L D++ KL+DF + E G H + + T Y++PE + + G +
Sbjct: 203 DNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAV--GTPDYISPEVLKSQGGDGYYGREC 260
Query: 241 DVFCFGMLLLELLTG 255
D + G+ L E+L G
Sbjct: 261 DWWSVGVFLFEMLVG 275
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
+I + YIH I+ +D+K S + +E K+ D+ + + + +T ++ TR
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDYGLARHT---DDEMTGYVATR 186
Query: 222 TKRYLAPEYILTGL-CNEKTDVFCFGMLLLELLTGR 256
Y APE +L + N+ D++ G ++ ELLTGR
Sbjct: 187 W--YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 165 NAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKR 224
+ YIH +V +D+K + +E K+ DF + + + +T +++TR
Sbjct: 155 KGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARH---ADAEMTGYVVTRW-- 206
Query: 225 YLAPEYILTGL-CNEKTDVFCFGMLLLELLTGR 256
Y APE IL+ + N+ D++ G ++ E+LTG+
Sbjct: 207 YRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 71/161 (44%), Gaps = 29/161 (18%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRIC-----SPHGPHLEPLLWRHRLKI 159
+++H NI+KL ++ +V E G L D I S H +I
Sbjct: 77 KLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDA----------ARI 126
Query: 160 AMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNV---AKLSDFSESEYIPEGETHVTS 216
++ + + Y+H + IV +D+K IL + K+ DF S + +
Sbjct: 127 IKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ-----NT 178
Query: 217 HMLTR--TKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
M R T Y+APE +L G +EK DV+ G++L LL+G
Sbjct: 179 KMKDRIGTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 52/99 (52%), Gaps = 9/99 (9%)
Query: 159 IAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHM 218
+ ++ + YIH +V +D+K + +E K+ DF + + + +T ++
Sbjct: 131 LVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARH---ADAEMTGYV 184
Query: 219 LTRTKRYLAPEYILTGL-CNEKTDVFCFGMLLLELLTGR 256
+TR Y APE IL+ + N+ D++ G ++ E+LTG+
Sbjct: 185 VTRW--YRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 166 AMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRY 225
A+ Y H R IV +D+K +L D+ K++DF S + +G TS + Y
Sbjct: 120 AIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTS---CGSPNY 173
Query: 226 LAPEYILTGL-CNEKTDVFCFGMLLLELLTGR 256
APE I L + DV+ G++L +L GR
Sbjct: 174 AAPEVINGKLYAGPEVDVWSCGIVLYVMLVGR 205
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 71/161 (44%), Gaps = 29/161 (18%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRIC-----SPHGPHLEPLLWRHRLKI 159
+++H NI+KL ++ +V E G L D I S H +I
Sbjct: 77 KLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA----------RI 126
Query: 160 AMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVA---KLSDFSESEYIPEGETHVTS 216
++ + + Y+H + IV +D+K IL + K+ DF S + +
Sbjct: 127 IKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-----T 178
Query: 217 HMLTR--TKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
M R T Y+APE +L G +EK DV+ G++L LL+G
Sbjct: 179 KMKDRIGTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 49/99 (49%), Gaps = 6/99 (6%)
Query: 158 KIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSH 217
K+++ + + Y+ + I+ +D+K S IL + KL DF S + ++
Sbjct: 170 KVSIAVIKGLTYLR--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL----IDSMAN 223
Query: 218 MLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTGR 256
T+ Y++PE + + ++D++ G+ L+E+ GR
Sbjct: 224 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 262
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 49/99 (49%), Gaps = 6/99 (6%)
Query: 158 KIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSH 217
K+++ + + Y+ + I+ +D+K S IL + KL DF S + ++
Sbjct: 135 KVSIAVIKGLTYLR--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL----IDSMAN 188
Query: 218 MLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTGR 256
T+ Y++PE + + ++D++ G+ L+E+ GR
Sbjct: 189 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 227
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 64/159 (40%), Gaps = 9/159 (5%)
Query: 98 NNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRL 157
N + Q+ H +IL+L ++ LV E G + + + ++P
Sbjct: 60 NEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKN----RVKPFSENEAR 115
Query: 158 KIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSH 217
+I M Y+H I+ +D+ LS +L K++DF + + H +
Sbjct: 116 HFMHQIITGMLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKM--PHEKHY 170
Query: 218 MLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTGR 256
L T Y++PE ++DV+ G + LL GR
Sbjct: 171 TLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGR 209
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 50/99 (50%), Gaps = 6/99 (6%)
Query: 158 KIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSH 217
K+++ + + Y+ + I+ +D+K S IL + KL DF S + + ++
Sbjct: 108 KVSIAVIKGLTYLR--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MAN 161
Query: 218 MLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTGR 256
T+ Y++PE + + ++D++ G+ L+E+ GR
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 71/161 (44%), Gaps = 29/161 (18%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRIC-----SPHGPHLEPLLWRHRLKI 159
+++H NI+KL ++ +V E G L D I S H +I
Sbjct: 77 KLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDA----------ARI 126
Query: 160 AMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNV---AKLSDFSESEYIPEGETHVTS 216
++ + + Y+H + IV +D+K IL + K+ DF S + +
Sbjct: 127 IKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ-----NT 178
Query: 217 HMLTR--TKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
M R T Y+APE +L G +EK DV+ G++L LL+G
Sbjct: 179 KMKDRIGTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 13/98 (13%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHM--L 219
+I + YIH I+ +D+K S + +E K+ DF + H M
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMAGF 182
Query: 220 TRTKRYLAPEYILTGL-CNEKTDVFCFGMLLLELLTGR 256
T+ Y APE +L + N+ D++ G ++ ELLTGR
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 13/98 (13%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHM--L 219
+I + YIH I+ +D+K S + +E K+ DF + H M
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMAGF 182
Query: 220 TRTKRYLAPEYILTGL-CNEKTDVFCFGMLLLELLTGR 256
T+ Y APE +L + N+ D++ G ++ ELLTGR
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 50/99 (50%), Gaps = 6/99 (6%)
Query: 158 KIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSH 217
K+++ + + Y+ + I+ +D+K S IL + KL DF S + + ++
Sbjct: 108 KVSIAVIKGLTYLR--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MAN 161
Query: 218 MLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTGR 256
T+ Y++PE + + ++D++ G+ L+E+ GR
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 50/99 (50%), Gaps = 6/99 (6%)
Query: 158 KIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSH 217
K+++ + + Y+ + I+ +D+K S IL + KL DF S + + ++
Sbjct: 108 KVSIAVIKGLTYLR--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MAN 161
Query: 218 MLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTGR 256
T+ Y++PE + + ++D++ G+ L+E+ GR
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 50/99 (50%), Gaps = 6/99 (6%)
Query: 158 KIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSH 217
K+++ + + Y+ + I+ +D+K S IL + KL DF S + + ++
Sbjct: 108 KVSIAVIKGLTYLR--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MAN 161
Query: 218 MLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTGR 256
T+ Y++PE + + ++D++ G+ L+E+ GR
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 50/99 (50%), Gaps = 6/99 (6%)
Query: 158 KIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSH 217
K+++ + + Y+ + I+ +D+K S IL + KL DF S + + ++
Sbjct: 108 KVSIAVIKGLTYLR--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MAN 161
Query: 218 MLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTGR 256
T+ Y++PE + + ++D++ G+ L+E+ GR
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 71/159 (44%), Gaps = 11/159 (6%)
Query: 96 CFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRH 155
I +++H NI+ L+ LVF+F+E T + I + L P +
Sbjct: 59 ALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFME--TDLEVIIKDNSLVLTPSHIKA 116
Query: 156 RLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVT 215
+ + ++ + Y+H + I+ +D+K + +L DE V KL+DF ++
Sbjct: 117 YMLMTLQ---GLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYX 170
Query: 216 SHMLTRTKRYLAPEYILTG-LCNEKTDVFCFGMLLLELL 253
++TR Y APE + + D++ G +L ELL
Sbjct: 171 HQVVTRW--YRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 13/98 (13%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHM--L 219
+I + YIH I+ +D+K S + +E K+ DF + H M
Sbjct: 129 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMAGF 178
Query: 220 TRTKRYLAPEYILTGL-CNEKTDVFCFGMLLLELLTGR 256
T+ Y APE +L + N+ D++ G ++ ELLTGR
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 68/165 (41%), Gaps = 19/165 (11%)
Query: 95 FCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRI---CSPHGPHLEPL 151
N I+ + + NI+ + + + +V E++ G+L D + C G
Sbjct: 64 LIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEG------ 117
Query: 152 LWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSE-SEYIPEG 210
+ E A+ ++H ++ ++IK IL KL+DF ++ PE
Sbjct: 118 ---QIAAVCRECLQALEFLH---SNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQ 171
Query: 211 ETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
T + T ++APE + K D++ G++ +E++ G
Sbjct: 172 SKRST---MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG 213
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 73/163 (44%), Gaps = 18/163 (11%)
Query: 98 NNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRIC--SPHGPHLEPLLWRH 155
N I Q++H N+++L +LV E+V+ G L DRI S + L+ +L+
Sbjct: 135 NEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMK 194
Query: 156 RLKIAMEIGNAMAYIHIGFRRPIVF---KDIKLSQILFDEYNVAKLSDFSESEYIPEGET 212
++ + + M +H+ + + +D K QI ++ +A+ Y P +
Sbjct: 195 QICEGIRHMHQMYILHLDLKPENILCVNRDAK--QIKIIDFGLAR-------RYKPREKL 245
Query: 213 HVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
V T +LAPE + + TD++ G++ LL+G
Sbjct: 246 KVN----FGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSG 284
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 9/96 (9%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
+I + YIH I+ +D+K S + +E K+ DF + + + +T ++ TR
Sbjct: 162 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATR 215
Query: 222 TKRYLAPEYILTGL-CNEKTDVFCFGMLLLELLTGR 256
Y APE +L + N D++ G ++ ELLTGR
Sbjct: 216 W--YRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 74/183 (40%), Gaps = 30/183 (16%)
Query: 90 ENGENFCFNNIVFAAQMNHRNILKL------IGCCIETEIPILVFEFVEYGTLA------ 137
+N E +C I ++NH N++ + ++P+L E+ E G L
Sbjct: 55 KNRERWCLE-IQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQF 113
Query: 138 DRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFD---EYN 194
+ C + LL +I +A+ Y+H I+ +D+K I+ +
Sbjct: 114 ENCCGLKEGPIRTLL--------SDISSALRYLH---ENRIIHRDLKPENIVLQPGPQRL 162
Query: 195 VAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+ K+ D ++ + +GE T +YLAPE + D + FG L E +T
Sbjct: 163 IHKIIDLGYAKELDQGELCTE---FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECIT 219
Query: 255 GRR 257
G R
Sbjct: 220 GFR 222
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 74/183 (40%), Gaps = 30/183 (16%)
Query: 90 ENGENFCFNNIVFAAQMNHRNILKL------IGCCIETEIPILVFEFVEYGTLA------ 137
+N E +C I ++NH N++ + ++P+L E+ E G L
Sbjct: 54 KNRERWCLE-IQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQF 112
Query: 138 DRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFD---EYN 194
+ C + LL +I +A+ Y+H I+ +D+K I+ +
Sbjct: 113 ENCCGLKEGPIRTLL--------SDISSALRYLH---ENRIIHRDLKPENIVLQPGPQRL 161
Query: 195 VAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLT 254
+ K+ D ++ + +GE T +YLAPE + D + FG L E +T
Sbjct: 162 IHKIIDLGYAKELDQGELCTE---FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECIT 218
Query: 255 GRR 257
G R
Sbjct: 219 GFR 221
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 9/96 (9%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
+I + YIH I+ +D+K S + +E K+ DF + + + + ++ TR
Sbjct: 156 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMXGYVATR 209
Query: 222 TKRYLAPEYILTGL-CNEKTDVFCFGMLLLELLTGR 256
Y APE +L + N+ D++ G ++ ELLTGR
Sbjct: 210 W--YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 13/98 (13%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHML-- 219
+I + YIH I+ +D+K S + +E K+ DF + H M
Sbjct: 153 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMXGX 202
Query: 220 TRTKRYLAPEYILTGL-CNEKTDVFCFGMLLLELLTGR 256
T+ Y APE +L + N+ D++ G ++ ELLTGR
Sbjct: 203 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 70/161 (43%), Gaps = 29/161 (18%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRL------K 158
Q++H NI KL + LV E G L D I S R R +
Sbjct: 82 QLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIIS-----------RKRFSEVDAAR 130
Query: 159 IAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFD----EYNVAKLSDFSESEYIPEGETHV 214
I ++ + + Y H + IV +D+K +L + + N+ ++ DF S + E
Sbjct: 131 IIRQVLSGITYXH---KNKIVHRDLKPENLLLESKSKDANI-RIIDFGLSTHF---EASK 183
Query: 215 TSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
T Y+APE +L G +EK DV+ G++L LL+G
Sbjct: 184 KXKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 66/156 (42%), Gaps = 14/156 (8%)
Query: 104 AQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEI 163
A N +++L + +V E++ G L + + + P + + +A++
Sbjct: 124 AFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDA 183
Query: 164 GNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTK 223
++M +IH +D+K +L D+ KL+DF + + E V T
Sbjct: 184 IHSMGFIH---------RDVKPDNMLLDKSGHLKLADFGTCMKMNK-EGMVRCDTAVGTP 233
Query: 224 RYLAPEYILT----GLCNEKTDVFCFGMLLLELLTG 255
Y++PE + + G + D + G+ L E+L G
Sbjct: 234 DYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 269
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Query: 158 KIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSES-EYIPEGETHVTS 216
K+++ + + Y+ + I+ +D+K S IL + KL DF S + I E +
Sbjct: 111 KVSIAVIKGLTYLR--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDE-----MA 163
Query: 217 HMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTGR 256
+ T+ Y++PE + + ++D++ G+ L+E+ GR
Sbjct: 164 NEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 9/103 (8%)
Query: 158 KIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSH 217
KIA+ I A+ ++H + ++ +D+K S +L + K DF S Y+ + V
Sbjct: 140 KIAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVD---DVAKD 194
Query: 218 MLTRTKRYLAPEYILTGLCNE----KTDVFCFGMLLLELLTGR 256
+ K Y APE I L + K+D++ G+ +EL R
Sbjct: 195 IDAGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILR 237
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 17/173 (9%)
Query: 89 SENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPIL--VFEFVEYGTLADRICSPHGP 146
+E + + + ++ H NI++ I+ L V E+ E G LA + +
Sbjct: 45 TEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLAS-VITKGTK 103
Query: 147 HLEPLLWRHRLKIAMEIGNAMAYIHIGFRRP-----IVFKDIKLSQILFDEYNVAKLSDF 201
+ L L++ ++ A+ H RR ++ +D+K + + D KL DF
Sbjct: 104 ERQYLDEEFVLRVMTQLTLALKECH---RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDF 160
Query: 202 SESEYIPEGETHVTSHMLT--RTKRYLAPEYILTGLCNEKTDVFCFGMLLLEL 252
+ + H TS T T Y++PE + NEK+D++ G LL EL
Sbjct: 161 GLARIL----NHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 67/175 (38%), Gaps = 19/175 (10%)
Query: 88 YSENGENFCFN---NIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSP- 143
Y E GE N I+ + H NI++ + +V E+ G L +RIC+
Sbjct: 51 YIERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAG 110
Query: 144 HGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVA--KLSDF 201
E + +L + +AM H +D+KL L D K++DF
Sbjct: 111 RFSEDEARFFFQQLISGVSYAHAMQVAH---------RDLKLENTLLDGSPAPRLKIADF 161
Query: 202 SESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEK-TDVFCFGMLLLELLTG 255
Y H T Y+APE +L + K DV+ G+ L +L G
Sbjct: 162 G---YSKASVLHSQPKSAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 58/129 (44%), Gaps = 15/129 (11%)
Query: 134 GTLADRICSP-HGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDE 192
GT A+++ GP E +L + M + A ++ + ++ +D+K S IL DE
Sbjct: 107 GTCAEKLKKRMQGPIPERILGK------MTVAIVKALYYLKEKHGVIHRDVKPSNILLDE 160
Query: 193 YNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNE-----KTDVFCFGM 247
KL DF S + + + S Y+APE I + + DV+ G+
Sbjct: 161 RGQIKLCDFGISGRLVDDKAKDRS---AGCAAYMAPERIDPPDPTKPDYDIRADVWSLGI 217
Query: 248 LLLELLTGR 256
L+EL TG+
Sbjct: 218 SLVELATGQ 226
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 66/156 (42%), Gaps = 14/156 (8%)
Query: 104 AQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEI 163
A N +++L + +V E++ G L + + + P + + +A++
Sbjct: 129 AFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDA 188
Query: 164 GNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTK 223
++M +IH +D+K +L D+ KL+DF + + E V T
Sbjct: 189 IHSMGFIH---------RDVKPDNMLLDKSGHLKLADFGTCMKMNK-EGMVRCDTAVGTP 238
Query: 224 RYLAPEYILT----GLCNEKTDVFCFGMLLLELLTG 255
Y++PE + + G + D + G+ L E+L G
Sbjct: 239 DYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 66/156 (42%), Gaps = 14/156 (8%)
Query: 104 AQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEI 163
A N +++L + +V E++ G L + + + P + + +A++
Sbjct: 129 AFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDA 188
Query: 164 GNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTK 223
++M +IH +D+K +L D+ KL+DF + + E V T
Sbjct: 189 IHSMGFIH---------RDVKPDNMLLDKSGHLKLADFGTCMKMNK-EGMVRCDTAVGTP 238
Query: 224 RYLAPEYILT----GLCNEKTDVFCFGMLLLELLTG 255
Y++PE + + G + D + G+ L E+L G
Sbjct: 239 DYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 71/171 (41%), Gaps = 13/171 (7%)
Query: 89 SENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPIL--VFEFVEYGTLADRICSPHGP 146
+E + + + ++ H NI++ I+ L V E+ E G LA + +
Sbjct: 45 TEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLAS-VITKGTK 103
Query: 147 HLEPLLWRHRLKIAMEIGNAMAYIHIGFRRP-----IVFKDIKLSQILFDEYNVAKLSDF 201
+ L L++ ++ A+ H RR ++ +D+K + + D KL DF
Sbjct: 104 ERQYLDEEFVLRVMTQLTLALKECH---RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDF 160
Query: 202 SESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLEL 252
+ + E T Y++PE + NEK+D++ G LL EL
Sbjct: 161 GLARILNHDEDFAKE--FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 73/173 (42%), Gaps = 17/173 (9%)
Query: 89 SENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPIL--VFEFVEYGTLADRICSPHGP 146
+E + + + ++ H NI++ I+ L V E+ E G LA + +
Sbjct: 45 TEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLAS-VITKGTK 103
Query: 147 HLEPLLWRHRLKIAMEIGNAMAYIHIGFRRP-----IVFKDIKLSQILFDEYNVAKLSDF 201
+ L L++ ++ A+ H RR ++ +D+K + + D KL DF
Sbjct: 104 ERQYLDEEFVLRVMTQLTLALKECH---RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDF 160
Query: 202 SESEYIPEGETHVTS--HMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLEL 252
+ + H TS T Y++PE + NEK+D++ G LL EL
Sbjct: 161 GLARIL----NHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 9/96 (9%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
+I + YIH I+ +D+K S + +E K+ F + + + +T ++ TR
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILGFGLARHT---DDEMTGYVATR 186
Query: 222 TKRYLAPEYILTGL-CNEKTDVFCFGMLLLELLTGR 256
Y APE +L + N+ D++ G ++ ELLTGR
Sbjct: 187 W--YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 77/193 (39%), Gaps = 19/193 (9%)
Query: 68 KLYKGFLENRPISVM---KFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIP 124
K+YK +N+ SV+ K D SE I A +H NI+KL+
Sbjct: 52 KVYKA--QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNL 109
Query: 125 ILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIK 184
++ EF G + + P E + + + +A+ Y+H I+ +D+K
Sbjct: 110 WILIEFCAGGAVDAVMLELERPLTESQI----QVVCKQTLDALNYLH---DNKIIHRDLK 162
Query: 185 LSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNE-----K 239
ILF KL+DF S T T ++APE ++ + K
Sbjct: 163 AGNILFTLDGDIKLADFGVS--AKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYK 220
Query: 240 TDVFCFGMLLLEL 252
DV+ G+ L+E+
Sbjct: 221 ADVWSLGITLIEM 233
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 71/161 (44%), Gaps = 31/161 (19%)
Query: 106 MNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLK------- 158
++H NI+KL + LV E + G L D I HR+K
Sbjct: 93 LDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEII-------------HRMKFNEVDAA 139
Query: 159 -IAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYN---VAKLSDFSESEYIPEGETHV 214
I ++ + + Y+H + IV +D+K +L + + K+ DF S + E + +
Sbjct: 140 VIIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSA-VFENQKKM 195
Query: 215 TSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
+ T Y+APE +L +EK DV+ G++L LL G
Sbjct: 196 KERL--GTAYYIAPE-VLRKKYDEKCDVWSIGVILFILLAG 233
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 9/96 (9%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
+I + YIH I+ +D+K S + +E K+ D + + + +T ++ TR
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDAGLARHT---DDEMTGYVATR 186
Query: 222 TKRYLAPEYILTGL-CNEKTDVFCFGMLLLELLTGR 256
Y APE +L + N+ D++ G ++ ELLTGR
Sbjct: 187 W--YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 66/175 (37%), Gaps = 19/175 (10%)
Query: 88 YSENGENFCFN---NIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSP- 143
Y E GE N I+ + H NI++ + +V E+ G L +RIC+
Sbjct: 51 YIERGEKIAANVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAG 110
Query: 144 HGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLS--DF 201
E + +L + +AM H +D+KL L D +L DF
Sbjct: 111 RFSEDEARFFFQQLISGVSYCHAMQVCH---------RDLKLENTLLDGSPAPRLKICDF 161
Query: 202 SESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEK-TDVFCFGMLLLELLTG 255
Y H T Y+APE +L + K DV+ G+ L +L G
Sbjct: 162 G---YSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 35.8 bits (81), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 9/96 (9%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
+I + YIH I+ +D+K S + +E K+ D + + + +T ++ TR
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDRGLARHT---DDEMTGYVATR 186
Query: 222 TKRYLAPEYILTGL-CNEKTDVFCFGMLLLELLTGR 256
Y APE +L + N+ D++ G ++ ELLTGR
Sbjct: 187 W--YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 35.8 bits (81), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 9/96 (9%)
Query: 162 EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR 221
+I + YIH I+ +D+K S + +E K+ D + + + +T ++ TR
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDGGLARHT---DDEMTGYVATR 186
Query: 222 TKRYLAPEYILTGL-CNEKTDVFCFGMLLLELLTGR 256
Y APE +L + N+ D++ G ++ ELLTGR
Sbjct: 187 W--YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 73/165 (44%), Gaps = 16/165 (9%)
Query: 97 FNNIVFAAQMNHRNILKLIGCCIET--EIPILVFEFVEYGTLADRICSPHGPHLEPLLWR 154
+ I +++H N++KL+ + + +VFE V G + + P L+PL
Sbjct: 84 YQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEV------PTLKPLSED 137
Query: 155 HRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHV 214
++ + Y+H + I+ +DIK S +L E K++DF S +G +
Sbjct: 138 QARFYFQDLIKGIEYLHY---QKIIHRDIKPSNLLVGEDGHIKIADFGVSNEF-KGSDAL 193
Query: 215 TSHMLTRTKRYLAPEYILTG---LCNEKTDVFCFGMLLLELLTGR 256
S+ + T ++APE + + DV+ G+ L + G+
Sbjct: 194 LSNTVG-TPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 77/193 (39%), Gaps = 18/193 (9%)
Query: 68 KLYKGFLENRPISVM---KFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIP 124
K+YK +N+ SV+ K D SE I A +H NI+KL+
Sbjct: 25 KVYKA--QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNL 82
Query: 125 ILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIK 184
++ EF G + + P E + + + +A+ Y+H I+ +D+K
Sbjct: 83 WILIEFCAGGAVDAVMLELERPLTESQI----QVVCKQTLDALNYLH---DNKIIHRDLK 135
Query: 185 LSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNE-----K 239
ILF KL+DF S + T ++APE ++ + K
Sbjct: 136 AGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIG-TPYWMAPEVVMCETSKDRPYDYK 194
Query: 240 TDVFCFGMLLLEL 252
DV+ G+ L+E+
Sbjct: 195 ADVWSLGITLIEM 207
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 80/199 (40%), Gaps = 31/199 (15%)
Query: 68 KLYKGFLENRPISVM---KFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIP 124
K+YK +N+ SV+ K D SE I A +H NI+KL+
Sbjct: 52 KVYKA--QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNL 109
Query: 125 ILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIK 184
++ EF G + + P E + + + +A+ Y+H I+ +D+K
Sbjct: 110 WILIEFCAGGAVDAVMLELERPLTESQI----QVVCKQTLDALNYLH---DNKIIHRDLK 162
Query: 185 LSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR------TKRYLAPEYILTGLCNE 238
ILF KL+DF G + + + R T ++APE ++ +
Sbjct: 163 AGNILFTLDGDIKLADF--------GVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKD 214
Query: 239 -----KTDVFCFGMLLLEL 252
K DV+ G+ L+E+
Sbjct: 215 RPYDYKADVWSLGITLIEM 233
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 35.4 bits (80), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 80/199 (40%), Gaps = 31/199 (15%)
Query: 68 KLYKGFLENRPISVM---KFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIP 124
K+YK +N+ SV+ K D SE I A +H NI+KL+
Sbjct: 52 KVYKA--QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNL 109
Query: 125 ILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIK 184
++ EF G + + P E + + + +A+ Y+H I+ +D+K
Sbjct: 110 WILIEFCAGGAVDAVMLELERPLTESQI----QVVCKQTLDALNYLH---DNKIIHRDLK 162
Query: 185 LSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR------TKRYLAPEYILTGLCNE 238
ILF KL+DF G + + + R T ++APE ++ +
Sbjct: 163 AGNILFTLDGDIKLADF--------GVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKD 214
Query: 239 -----KTDVFCFGMLLLEL 252
K DV+ G+ L+E+
Sbjct: 215 RPYDYKADVWSLGITLIEM 233
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 35.0 bits (79), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 75/187 (40%), Gaps = 23/187 (12%)
Query: 71 KGFLENRPISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEF 130
K FLE+ V+K I Q+ H N++ L+ LVFE+
Sbjct: 34 KKFLESEDDPVIK----------KIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEY 83
Query: 131 VEYGTLADRICSPHGPHLEPLLWRHRLK-IAMEIGNAMAYIHIGFRRPIVFKDIKLSQIL 189
++ L + G + H +K I + A+ + H + + +D+K IL
Sbjct: 84 CDHTVLHELDRYQRG------VPEHLVKSITWQTLQAVNFCH---KHNCIHRDVKPENIL 134
Query: 190 FDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGL-CNEKTDVFCFGML 248
+++V KL DF + + + + TR Y +PE ++ DV+ G +
Sbjct: 135 ITKHSVIKLCDFGFARLLTGPSDYYDDEVATRW--YRSPELLVGDTQYGPPVDVWAIGCV 192
Query: 249 LLELLTG 255
ELL+G
Sbjct: 193 FAELLSG 199
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 35.0 bits (79), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 69/161 (42%), Gaps = 15/161 (9%)
Query: 98 NNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRL 157
N I ++ H NI+ L T LV + V G L DRI G + E +
Sbjct: 55 NEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILE-RGVYTE----KDAS 109
Query: 158 KIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILF---DEYNVAKLSDFSESEYIPEGETHV 214
+ ++ +A+ Y+H IV +D+K +L+ +E + ++DF S+ E +
Sbjct: 110 LVIQQVLSAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKM----EQNG 162
Query: 215 TSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
T Y+APE + ++ D + G++ LL G
Sbjct: 163 IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCG 203
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 35.0 bits (79), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 67/155 (43%), Gaps = 17/155 (10%)
Query: 107 NHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNA 166
H NI++L LVF+ ++ G L D + L + KI +
Sbjct: 82 GHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK-----VTLSEKETRKIMRALLEV 136
Query: 167 MAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYL 226
+ +H + IV +D+K IL D+ KL+DF S + GE + + T YL
Sbjct: 137 ICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRS---VCGTPSYL 190
Query: 227 APEYILTGLCN------EKTDVFCFGMLLLELLTG 255
APE I + + ++ D++ G+++ LL G
Sbjct: 191 APEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 35.0 bits (79), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 52/125 (41%), Gaps = 27/125 (21%)
Query: 150 PLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILF--DEYNVA----------- 196
P H K+A +I ++ ++H + D+K ILF +Y A
Sbjct: 114 PFRLDHIRKMAYQICKSVNFLH---SNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERT 170
Query: 197 ------KLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLL 250
K+ DF + Y + E H T L T+ Y APE IL ++ DV+ G +L+
Sbjct: 171 LINPDIKVVDFGSATY--DDEHHST---LVSTRHYRAPEVILALGWSQPCDVWSIGCILI 225
Query: 251 ELLTG 255
E G
Sbjct: 226 EYYLG 230
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 35.0 bits (79), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Query: 219 LTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTGRRDNILLEHVKKHVENNRLGE-I 277
+ T++Y APE IL + +D++ FG +L EL TG LL +H+E+ + E I
Sbjct: 219 IINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGS----LLFRTHEHMEHLAMMESI 274
Query: 278 VDPI 281
+ PI
Sbjct: 275 IQPI 278
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 34.7 bits (78), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 7/80 (8%)
Query: 178 IVFKDIKLSQILFDEYNVA--KLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGL 235
I+ D+K IL + + K+ DF S Y H + +++ Y APE IL
Sbjct: 221 IIHCDLKPENILLKQQGRSGIKVIDFGSSCY-----EHQRVYXXIQSRFYRAPEVILGAR 275
Query: 236 CNEKTDVFCFGMLLLELLTG 255
D++ G +L ELLTG
Sbjct: 276 YGMPIDMWSLGCILAELLTG 295
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 34.7 bits (78), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 66/155 (42%), Gaps = 17/155 (10%)
Query: 107 NHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNA 166
H NI++L LVF+ ++ G L D + L + KI +
Sbjct: 82 GHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK-----VTLSEKETRKIMRALLEV 136
Query: 167 MAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYL 226
+ +H + IV +D+K IL D+ KL+DF S + GE + T YL
Sbjct: 137 ICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE---KLREVCGTPSYL 190
Query: 227 APEYILTGLCN------EKTDVFCFGMLLLELLTG 255
APE I + + ++ D++ G+++ LL G
Sbjct: 191 APEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 34.7 bits (78), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 11/91 (12%)
Query: 169 YIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDF---SESEYIPEGETHVTSHMLTRTKRY 225
Y+H R ++ +D+KL + +E K+ DF ++ EY +GE T L T Y
Sbjct: 136 YLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY--DGERKKT---LCGTPNY 187
Query: 226 LAPEYILTGLCNEKTDVFCFGMLLLELLTGR 256
+APE + + + DV+ G ++ LL G+
Sbjct: 188 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 218
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 34.7 bits (78), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 11/91 (12%)
Query: 169 YIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDF---SESEYIPEGETHVTSHMLTRTKRY 225
Y+H R ++ +D+KL + +E K+ DF ++ EY +GE T L T Y
Sbjct: 132 YLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY--DGERKKT---LCGTPNY 183
Query: 226 LAPEYILTGLCNEKTDVFCFGMLLLELLTGR 256
+APE + + + DV+ G ++ LL G+
Sbjct: 184 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 214
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 34.7 bits (78), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 7/80 (8%)
Query: 178 IVFKDIKLSQILFDEYNVA--KLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGL 235
I+ D+K IL + + K+ DF S Y H + +++ Y APE IL
Sbjct: 221 IIHCDLKPENILLKQQGRSGIKVIDFGSSCY-----EHQRVYTXIQSRFYRAPEVILGAR 275
Query: 236 CNEKTDVFCFGMLLLELLTG 255
D++ G +L ELLTG
Sbjct: 276 YGMPIDMWSLGCILAELLTG 295
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 34.7 bits (78), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 66/155 (42%), Gaps = 17/155 (10%)
Query: 107 NHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNA 166
H NI++L LVF+ ++ G L D + L + KI +
Sbjct: 69 GHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK-----VTLSEKETRKIMRALLEV 123
Query: 167 MAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYL 226
+ +H + IV +D+K IL D+ KL+DF S + GE + T YL
Sbjct: 124 ICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE---KLREVCGTPSYL 177
Query: 227 APEYILTGLCN------EKTDVFCFGMLLLELLTG 255
APE I + + ++ D++ G+++ LL G
Sbjct: 178 APEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 212
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 34.7 bits (78), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 11/91 (12%)
Query: 169 YIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDF---SESEYIPEGETHVTSHMLTRTKRY 225
Y+H R ++ +D+KL + +E K+ DF ++ EY +GE T L T Y
Sbjct: 132 YLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY--DGERKKT---LCGTPNY 183
Query: 226 LAPEYILTGLCNEKTDVFCFGMLLLELLTGR 256
+APE + + + DV+ G ++ LL G+
Sbjct: 184 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 214
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 34.7 bits (78), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 59/134 (44%), Gaps = 12/134 (8%)
Query: 125 ILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIK 184
++V E ++ G L RI + R +I IG A+ Y+H I +D+K
Sbjct: 135 LIVMECLDGGELFSRIQDRGD---QAFTEREASEIMKSIGEAIQYLH---SINIAHRDVK 188
Query: 185 LSQILFDEYN---VAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTD 241
+L+ + KL+DF + E +H + T Y+APE + ++ D
Sbjct: 189 PENLLYTSKRPNAILKLTDFG---FAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 245
Query: 242 VFCFGMLLLELLTG 255
++ G+++ LL G
Sbjct: 246 MWSLGVIMYILLCG 259
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 34.7 bits (78), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 7/80 (8%)
Query: 178 IVFKDIKLSQILFDEYNVA--KLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGL 235
I+ D+K IL + + K+ DF S Y H + +++ Y APE IL
Sbjct: 221 IIHCDLKPENILLKQQGRSGIKVIDFGSSCY-----EHQRVYTXIQSRFYRAPEVILGAR 275
Query: 236 CNEKTDVFCFGMLLLELLTG 255
D++ G +L ELLTG
Sbjct: 276 YGMPIDMWSLGCILAELLTG 295
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 34.3 bits (77), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 59/134 (44%), Gaps = 12/134 (8%)
Query: 125 ILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIK 184
++V E ++ G L RI + R +I IG A+ Y+H I +D+K
Sbjct: 141 LIVMECLDGGELFSRIQDRGD---QAFTEREASEIMKSIGEAIQYLH---SINIAHRDVK 194
Query: 185 LSQILFDEYN---VAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTD 241
+L+ + KL+DF + E +H + T Y+APE + ++ D
Sbjct: 195 PENLLYTSKRPNAILKLTDFG---FAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 251
Query: 242 VFCFGMLLLELLTG 255
++ G+++ LL G
Sbjct: 252 MWSLGVIMYILLCG 265
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 34.3 bits (77), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 66/175 (37%), Gaps = 19/175 (10%)
Query: 88 YSENGENFCFN---NIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSP- 143
Y E GE N I+ + H NI++ + +V E+ G L +RIC+
Sbjct: 50 YIERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAG 109
Query: 144 HGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLS--DF 201
E + +L + +AM H +D+KL L D +L DF
Sbjct: 110 RFSEDEARFFFQQLISGVSYCHAMQVCH---------RDLKLENTLLDGSPAPRLKICDF 160
Query: 202 SESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEK-TDVFCFGMLLLELLTG 255
Y H T Y+APE +L + K DV+ G+ L +L G
Sbjct: 161 G---YSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 212
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 34.3 bits (77), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 64/154 (41%), Gaps = 14/154 (9%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIG 164
++ H NI++L E LVF+ V G L + I + E +I
Sbjct: 84 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVA-----REFYSEADASHCIQQIL 138
Query: 165 NAMAYIHIGFRRPIVFKDIKLSQILFDEYN---VAKLSDFSESEYIPEGETHVTSHMLTR 221
++AY H IV +++K +L KL+DF + + + E H
Sbjct: 139 ESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW---HGFAG 192
Query: 222 TKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
T YL+PE + ++ D++ G++L LL G
Sbjct: 193 TPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 34.3 bits (77), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 59/134 (44%), Gaps = 12/134 (8%)
Query: 125 ILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIK 184
++V E ++ G L RI + R +I IG A+ Y+H I +D+K
Sbjct: 91 LIVMECLDGGELFSRIQDRGD---QAFTEREASEIMKSIGEAIQYLH---SINIAHRDVK 144
Query: 185 LSQILFDEYN---VAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTD 241
+L+ + KL+DF + E +H + T Y+APE + ++ D
Sbjct: 145 PENLLYTSKRPNAILKLTDFG---FAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 201
Query: 242 VFCFGMLLLELLTG 255
++ G+++ LL G
Sbjct: 202 MWSLGVIMYILLCG 215
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 59/134 (44%), Gaps = 12/134 (8%)
Query: 125 ILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIK 184
++V E ++ G L RI + R +I IG A+ Y+H I +D+K
Sbjct: 89 LIVMECLDGGELFSRIQDRGD---QAFTEREASEIMKSIGEAIQYLH---SINIAHRDVK 142
Query: 185 LSQILFDEYN---VAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTD 241
+L+ + KL+DF + E +H + T Y+APE + ++ D
Sbjct: 143 PENLLYTSKRPNAILKLTDFG---FAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 199
Query: 242 VFCFGMLLLELLTG 255
++ G+++ LL G
Sbjct: 200 MWSLGVIMYILLCG 213
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 59/134 (44%), Gaps = 12/134 (8%)
Query: 125 ILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIK 184
++V E ++ G L RI + R +I IG A+ Y+H I +D+K
Sbjct: 105 LIVMECLDGGELFSRIQDRGD---QAFTEREASEIMKSIGEAIQYLH---SINIAHRDVK 158
Query: 185 LSQILFDEYN---VAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTD 241
+L+ + KL+DF + E +H + T Y+APE + ++ D
Sbjct: 159 PENLLYTSKRPNAILKLTDFG---FAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 215
Query: 242 VFCFGMLLLELLTG 255
++ G+++ LL G
Sbjct: 216 MWSLGVIMYILLCG 229
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 59/134 (44%), Gaps = 12/134 (8%)
Query: 125 ILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIK 184
++V E ++ G L RI + R +I IG A+ Y+H I +D+K
Sbjct: 95 LIVMECLDGGELFSRIQDRGD---QAFTEREASEIMKSIGEAIQYLH---SINIAHRDVK 148
Query: 185 LSQILFDEYN---VAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTD 241
+L+ + KL+DF + E +H + T Y+APE + ++ D
Sbjct: 149 PENLLYTSKRPNAILKLTDFG---FAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 205
Query: 242 VFCFGMLLLELLTG 255
++ G+++ LL G
Sbjct: 206 MWSLGVIMYILLCG 219
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 59/134 (44%), Gaps = 12/134 (8%)
Query: 125 ILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIK 184
++V E ++ G L RI + R +I IG A+ Y+H I +D+K
Sbjct: 91 LIVMECLDGGELFSRIQDRGD---QAFTEREASEIMKSIGEAIQYLH---SINIAHRDVK 144
Query: 185 LSQILFDEYN---VAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTD 241
+L+ + KL+DF + E +H + T Y+APE + ++ D
Sbjct: 145 PENLLYTSKRPNAILKLTDFG---FAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 201
Query: 242 VFCFGMLLLELLTG 255
++ G+++ LL G
Sbjct: 202 MWSLGVIMYILLCG 215
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 59/134 (44%), Gaps = 12/134 (8%)
Query: 125 ILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIK 184
++V E ++ G L RI + R +I IG A+ Y+H I +D+K
Sbjct: 97 LIVMECLDGGELFSRIQDRGD---QAFTEREASEIMKSIGEAIQYLH---SINIAHRDVK 150
Query: 185 LSQILFDEYN---VAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTD 241
+L+ + KL+DF + E +H + T Y+APE + ++ D
Sbjct: 151 PENLLYTSKRPNAILKLTDFG---FAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 207
Query: 242 VFCFGMLLLELLTG 255
++ G+++ LL G
Sbjct: 208 MWSLGVIMYILLCG 221
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 64/154 (41%), Gaps = 14/154 (9%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIG 164
++ H NI++L E LVF+ V G L + I + E +I
Sbjct: 60 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVA-----REFYSEADASHCIQQIL 114
Query: 165 NAMAYIHIGFRRPIVFKDIKLSQILFDEYN---VAKLSDFSESEYIPEGETHVTSHMLTR 221
++AY H IV +++K +L KL+DF + + + E H
Sbjct: 115 ESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW---HGFAG 168
Query: 222 TKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
T YL+PE + ++ D++ G++L LL G
Sbjct: 169 TPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 59/134 (44%), Gaps = 12/134 (8%)
Query: 125 ILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIK 184
++V E ++ G L RI + R +I IG A+ Y+H I +D+K
Sbjct: 96 LIVMECLDGGELFSRIQDRGD---QAFTEREASEIMKSIGEAIQYLH---SINIAHRDVK 149
Query: 185 LSQILFDEYN---VAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTD 241
+L+ + KL+DF + E +H + T Y+APE + ++ D
Sbjct: 150 PENLLYTSKRPNAILKLTDFG---FAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 206
Query: 242 VFCFGMLLLELLTG 255
++ G+++ LL G
Sbjct: 207 MWSLGVIMYILLCG 220
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 59/134 (44%), Gaps = 12/134 (8%)
Query: 125 ILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIK 184
++V E ++ G L RI + R +I IG A+ Y+H I +D+K
Sbjct: 90 LIVMECLDGGELFSRIQDRGD---QAFTEREASEIMKSIGEAIQYLH---SINIAHRDVK 143
Query: 185 LSQILFDEYN---VAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTD 241
+L+ + KL+DF + E +H + T Y+APE + ++ D
Sbjct: 144 PENLLYTSKRPNAILKLTDFG---FAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 200
Query: 242 VFCFGMLLLELLTG 255
++ G+++ LL G
Sbjct: 201 MWSLGVIMYILLCG 214
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 64/154 (41%), Gaps = 14/154 (9%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIG 164
++ H NI++L E LVF+ V G L + I + E +I
Sbjct: 61 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVA-----REFYSEADASHCIQQIL 115
Query: 165 NAMAYIHIGFRRPIVFKDIKLSQILFDEYN---VAKLSDFSESEYIPEGETHVTSHMLTR 221
++AY H IV +++K +L KL+DF + + + E H
Sbjct: 116 ESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW---HGFAG 169
Query: 222 TKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
T YL+PE + ++ D++ G++L LL G
Sbjct: 170 TPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 64/154 (41%), Gaps = 14/154 (9%)
Query: 105 QMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIG 164
++ H NI++L E LVF+ V G L + I + E +I
Sbjct: 61 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVA-----REFYSEADASHCIQQIL 115
Query: 165 NAMAYIHIGFRRPIVFKDIKLSQILFDEYN---VAKLSDFSESEYIPEGETHVTSHMLTR 221
++AY H IV +++K +L KL+DF + + + E H
Sbjct: 116 ESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW---HGFAG 169
Query: 222 TKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
T YL+PE + ++ D++ G++L LL G
Sbjct: 170 TPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 11/91 (12%)
Query: 169 YIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDF---SESEYIPEGETHVTSHMLTRTKRY 225
Y+H R ++ +D+KL + +E K+ DF ++ EY +GE +L T Y
Sbjct: 154 YLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY--DGER---KKVLCGTPNY 205
Query: 226 LAPEYILTGLCNEKTDVFCFGMLLLELLTGR 256
+APE + + + DV+ G ++ LL G+
Sbjct: 206 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 236
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 11/91 (12%)
Query: 169 YIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDF---SESEYIPEGETHVTSHMLTRTKRY 225
Y+H R ++ +D+KL + +E K+ DF ++ EY +GE +L T Y
Sbjct: 156 YLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY--DGER---KKVLCGTPNY 207
Query: 226 LAPEYILTGLCNEKTDVFCFGMLLLELLTGR 256
+APE + + + DV+ G ++ LL G+
Sbjct: 208 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 238
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 71/168 (42%), Gaps = 30/168 (17%)
Query: 84 FGDNYSENGENFC---FNNIVFA-------------AQMNHRNILKLIGCCIETEI--PI 125
F + + G+ F FNNI F ++NH+NI+KL ET +
Sbjct: 26 FRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKV 85
Query: 126 LVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKL 185
L+ EF G+L + P + P L + ++ M ++ IV ++IK
Sbjct: 86 LIMEFCPCGSLYTVLEEPSNAYGLPE--SEFLIVLRDVVGGMNHLR---ENGIVHRNIKP 140
Query: 186 SQILF----DEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPE 229
I+ D +V KL+DF + + + E V+ L T+ YL P+
Sbjct: 141 GNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVS---LYGTEEYLHPD 185
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 11/91 (12%)
Query: 169 YIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDF---SESEYIPEGETHVTSHMLTRTKRY 225
Y+H R ++ +D+KL + +E K+ DF ++ EY +GE +L T Y
Sbjct: 130 YLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY--DGER---KKVLCGTPNY 181
Query: 226 LAPEYILTGLCNEKTDVFCFGMLLLELLTGR 256
+APE + + + DV+ G ++ LL G+
Sbjct: 182 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 212
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 61/134 (45%), Gaps = 13/134 (9%)
Query: 125 ILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIK 184
+++ E +E G L RI + R +I +IG A+ ++H I +D+K
Sbjct: 83 LIIMECMEGGELFSRIQERGD---QAFTEREAAEIMRDIGTAIQFLH---SHNIAHRDVK 136
Query: 185 LSQILF---DEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTD 241
+L+ ++ V KL+DF ++ + + T Y+APE + ++ D
Sbjct: 137 PENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCY----TPYYVAPEVLGPEKYDKSCD 192
Query: 242 VFCFGMLLLELLTG 255
++ G+++ LL G
Sbjct: 193 MWSLGVIMYILLCG 206
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 65/157 (41%), Gaps = 15/157 (9%)
Query: 107 NHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNA 166
NH NI+ I +V F+ YG+ D IC+ + L + L+ ++ A
Sbjct: 84 NHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLK---A 140
Query: 167 MAYI-HIGFRRPIVFKDIKLSQILFDEYNVAKLSDF-SESEYIPEGETHVTSHMLTRTK- 223
+ YI H+G+ V + +K S IL LS S I G+ H +
Sbjct: 141 LDYIHHMGY----VHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSV 196
Query: 224 ---RYLAPEYILTGL--CNEKTDVFCFGMLLLELLTG 255
+L+PE + L + K+D++ G+ EL G
Sbjct: 197 KVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANG 233
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 65/150 (43%), Gaps = 12/150 (8%)
Query: 108 HRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAM 167
HRNIL L E +++FEF+ + +RI + L R + ++ A+
Sbjct: 60 HRNILHLHESFESMEELVMIFEFISGLDIFERINTSAF----ELNEREIVSYVHQVCEAL 115
Query: 168 AYIHIGFRRPIVFKDIKLSQILFD--EYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRY 225
++H I DI+ I++ + K+ +F ++ + G+ +L Y
Sbjct: 116 QFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNF---RLLFTAPEY 169
Query: 226 LAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
APE + + TD++ G L+ LL+G
Sbjct: 170 YAPEVHQHDVVSTATDMWSLGTLVYVLLSG 199
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 81/183 (44%), Gaps = 29/183 (15%)
Query: 108 HRNILKLIGCCI------ETEIPILVFEFVEYG--TLADRICSPHGPHLEPLLWRHRLKI 159
H N+++L C ET++ LVFE V+ T D++ P P +K
Sbjct: 73 HPNVVRLFDVCTVSRTDRETKL-TLVFEHVDQDLTTYLDKVPEPGVP-------TETIKD 124
Query: 160 AM-EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHM 218
M ++ + ++H +V +D+K IL KL+DF + I + +TS +
Sbjct: 125 MMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLAR-IYSFQMALTSVV 180
Query: 219 LTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTGRRDNILLEHVKKHVENNRLGEIV 278
+T Y APE +L D++ G + E+ RR + + + ++LG+I+
Sbjct: 181 VTLW--YRAPEVLLQSSYATPVDLWSVGCIFAEMF--RRKPLF----RGSSDVDQLGKIL 232
Query: 279 DPI 281
D I
Sbjct: 233 DVI 235
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 71/155 (45%), Gaps = 13/155 (8%)
Query: 106 MNHRNILKLIGCCIETEIPILVFEFVEYGTLADRIC--SPHGPHLEPLLWRHRLKIAMEI 163
+ H +I++L+ + +VFEF++ L I + G + H ++ +E
Sbjct: 83 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILE- 141
Query: 164 GNAMAYIHIGFRRPIVFKDIKLSQILF-DEYNVA--KLSDFSESEYIPEGETHVTSHMLT 220
A+ Y H I+ +D+K +L + N A KL DF + I GE+ + +
Sbjct: 142 --ALRYCH---DNNIIHRDVKPENVLLASKENSAPVKLGDFGVA--IQLGESGLVAGGRV 194
Query: 221 RTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
T ++APE + + DV+ G++L LL+G
Sbjct: 195 GTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 33.5 bits (75), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 81/184 (44%), Gaps = 29/184 (15%)
Query: 107 NHRNILKLIGCCI------ETEIPILVFEFVEYG--TLADRICSPHGPHLEPLLWRHRLK 158
H N+++L C ET++ LVFE V+ T D++ P P +K
Sbjct: 72 EHPNVVRLFDVCTVSRTDRETKL-TLVFEHVDQDLTTYLDKVPEPGVP-------TETIK 123
Query: 159 IAM-EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSH 217
M ++ + ++H +V +D+K IL KL+DF + I + +TS
Sbjct: 124 DMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLAR-IYSFQMALTSV 179
Query: 218 MLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTGRRDNILLEHVKKHVENNRLGEI 277
++T Y APE +L D++ G + E+ RR + + + ++LG+I
Sbjct: 180 VVTLW--YRAPEVLLQSSYATPVDLWSVGCIFAEMF--RRKPLF----RGSSDVDQLGKI 231
Query: 278 VDPI 281
+D I
Sbjct: 232 LDVI 235
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 33.5 bits (75), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 61/134 (45%), Gaps = 13/134 (9%)
Query: 125 ILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIK 184
+++ E +E G L RI + R +I +IG A+ ++H I +D+K
Sbjct: 102 LIIMECMEGGELFSRIQERGD---QAFTEREAAEIMRDIGTAIQFLH---SHNIAHRDVK 155
Query: 185 LSQILF---DEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTD 241
+L+ ++ V KL+DF ++ + + T Y+APE + ++ D
Sbjct: 156 PENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCY----TPYYVAPEVLGPEKYDKSCD 211
Query: 242 VFCFGMLLLELLTG 255
++ G+++ LL G
Sbjct: 212 MWSLGVIMYILLCG 225
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 33.5 bits (75), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 81/183 (44%), Gaps = 29/183 (15%)
Query: 108 HRNILKLIGCCI------ETEIPILVFEFVEYG--TLADRICSPHGPHLEPLLWRHRLKI 159
H N+++L C ET++ LVFE V+ T D++ P P +K
Sbjct: 73 HPNVVRLFDVCTVSRTDRETKL-TLVFEHVDQDLTTYLDKVPEPGVP-------TETIKD 124
Query: 160 AM-EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHM 218
M ++ + ++H +V +D+K IL KL+DF + I + +TS +
Sbjct: 125 MMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLAR-IYSFQMALTSVV 180
Query: 219 LTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTGRRDNILLEHVKKHVENNRLGEIV 278
+T Y APE +L D++ G + E+ RR + + + ++LG+I+
Sbjct: 181 VTLW--YRAPEVLLQSSYATPVDLWSVGCIFAEMF--RRKPLF----RGSSDVDQLGKIL 232
Query: 279 DPI 281
D I
Sbjct: 233 DVI 235
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 33.5 bits (75), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 65/157 (41%), Gaps = 15/157 (9%)
Query: 107 NHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNA 166
NH NI+ I +V F+ YG+ D IC+ + L + L+ ++ A
Sbjct: 68 NHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLK---A 124
Query: 167 MAYI-HIGFRRPIVFKDIKLSQILFDEYNVAKLSDF-SESEYIPEGETHVTSHMLTRTK- 223
+ YI H+G+ V + +K S IL LS S I G+ H +
Sbjct: 125 LDYIHHMGY----VHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSV 180
Query: 224 ---RYLAPEYILTGL--CNEKTDVFCFGMLLLELLTG 255
+L+PE + L + K+D++ G+ EL G
Sbjct: 181 KVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANG 217
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 59/134 (44%), Gaps = 12/134 (8%)
Query: 125 ILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIK 184
++V E ++ G L RI + R +I IG A+ Y+H I +D+K
Sbjct: 89 LIVMECLDGGELFSRIQDRGD---QAFTEREASEIMKSIGEAIQYLH---SINIAHRDVK 142
Query: 185 LSQILFDEYN---VAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTD 241
+L+ + KL+DF + E +H + T Y+APE + ++ D
Sbjct: 143 PENLLYTSKRPNAILKLTDFG---FAKETTSHNSLTEPCYTPYYVAPEVLGPEKYDKSCD 199
Query: 242 VFCFGMLLLELLTG 255
++ G+++ LL G
Sbjct: 200 MWSLGVIMYILLCG 213
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 178 IVFKDIKLSQILFDEYNVAKLSDFSESEYIP-EGETHVTSHMLTRTKRYLAPEYILTGLC 236
++ +D+KL + ++ K+ DF + I +GE T L T Y+APE +
Sbjct: 163 VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT---LCGTPNYIAPEVLCKKGH 219
Query: 237 NEKTDVFCFGMLLLELLTGR 256
+ + D++ G +L LL G+
Sbjct: 220 SFEVDIWSLGCILYTLLVGK 239
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 70/168 (41%), Gaps = 30/168 (17%)
Query: 84 FGDNYSENGENFC---FNNIVFA-------------AQMNHRNILKLIGCCIETEI--PI 125
F + + G+ F FNNI F ++NH+NI+KL ET +
Sbjct: 26 FRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKV 85
Query: 126 LVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKL 185
L+ EF G+L + P + P L + ++ M ++ IV ++IK
Sbjct: 86 LIMEFCPCGSLYTVLEEPSNAYGLPE--SEFLIVLRDVVGGMNHLR---ENGIVHRNIKP 140
Query: 186 SQILF----DEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPE 229
I+ D +V KL+DF + + + E V L T+ YL P+
Sbjct: 141 GNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVX---LYGTEEYLHPD 185
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 74/175 (42%), Gaps = 16/175 (9%)
Query: 86 DNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPI-LVFEFV--EYGTLADRICS 142
D +E + I ++NH NI+KL+ I TE + LVFEF+ + T D
Sbjct: 42 DTETEGVPSTAIREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQDLKTFMDASAL 100
Query: 143 PHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFS 202
P PL+ + ++ +A+ H ++ +D+K +L + KL+DF
Sbjct: 101 TGIP--LPLIKSYLFQLL----QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFG 151
Query: 203 ESEYIPEGETHVTSHMLTRTKRYLAPEYILT-GLCNEKTDVFCFGMLLLELLTGR 256
+ G T T Y APE +L + D++ G + E++T R
Sbjct: 152 LARAF--GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 15/96 (15%)
Query: 166 AMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTR---- 221
+ Y+H F R I +DIK IL + AKL+DF + +T M R
Sbjct: 137 GLEYLH--FMRKI-HRDIKAGNILLNTEGHAKLADFGVA-------GQLTDXMAKRNXVI 186
Query: 222 -TKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTGR 256
T ++APE I N D++ G+ +E+ G+
Sbjct: 187 GTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGK 222
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 87/209 (41%), Gaps = 39/209 (18%)
Query: 68 KLYKGFLENRPISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGC-----CIETE 122
++++G ++V F E F I + H NIL I T+
Sbjct: 19 EVWRGKWRGEEVAVKIFSSR--EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQ 76
Query: 123 IPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGF-----RRP 177
+ LV ++ E+G+L D + + + +E ++ K+A+ + +A++H+ +
Sbjct: 77 L-WLVSDYHEHGSLFDYL-NRYTVTVEGMI-----KLALSTASGLAHLHMEIVGTQGKPA 129
Query: 178 IVFKDIKLSQILFDEYNVAKLSDF-------SESEYIPEGETHVTSHMLTRTKRYLAPEY 230
I +D+K IL + ++D S ++ I H TKRY+APE
Sbjct: 130 IAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVG-----TKRYMAPE- 183
Query: 231 ILTGLCN-------EKTDVFCFGMLLLEL 252
+L N ++ D++ G++ E+
Sbjct: 184 VLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 68/177 (38%), Gaps = 23/177 (12%)
Query: 88 YSENGENFCFN---NIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSP- 143
Y E GE N I+ + H NI++ + +V E+ G L +RIC+
Sbjct: 51 YIERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAG 110
Query: 144 HGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLS---- 199
E + +L + +AM H +D+KL L D +L
Sbjct: 111 RFSEDEARFFFQQLISGVSYCHAMQVCH---------RDLKLENTLLDGSPAPRLKICAF 161
Query: 200 DFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEK-TDVFCFGMLLLELLTG 255
+S+S + H T Y+APE +L + K DV+ G+ L +L G
Sbjct: 162 GYSKSSVL-----HSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 69/154 (44%), Gaps = 17/154 (11%)
Query: 108 HRNILKLIGCCIETEIPILVFEFVEYGTLADRICSP-HGPHLEPLLWRHRLKIAMEIGNA 166
H NI+KL + LV E + G L +RI H E I ++ +A
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASY------IMRKLVSA 118
Query: 167 MAYIH-IGFRRPIVFKDIKLSQILFDEYN---VAKLSDFSESEYIPEGETHVTSHMLTRT 222
++++H +G +V +D+K +LF + N K+ DF + P + + T
Sbjct: 119 VSHMHDVG----VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTL- 173
Query: 223 KRYLAPEYILTGLCNEKTDVFCFGMLLLELLTGR 256
Y APE + +E D++ G++L +L+G+
Sbjct: 174 -HYAAPELLNQNGYDESCDLWSLGVILYTMLSGQ 206
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 87/209 (41%), Gaps = 39/209 (18%)
Query: 68 KLYKGFLENRPISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGC-----CIETE 122
++++G ++V F E F I + H NIL I T+
Sbjct: 18 EVWRGKWRGEEVAVKIFSSR--EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQ 75
Query: 123 IPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGF-----RRP 177
+ LV ++ E+G+L D + + + +E ++ K+A+ + +A++H+ +
Sbjct: 76 L-WLVSDYHEHGSLFDYL-NRYTVTVEGMI-----KLALSTASGLAHLHMEIVGTQGKPA 128
Query: 178 IVFKDIKLSQILFDEYNVAKLSDF-------SESEYIPEGETHVTSHMLTRTKRYLAPEY 230
I +D+K IL + ++D S ++ I H TKRY+APE
Sbjct: 129 IAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVG-----TKRYMAPE- 182
Query: 231 ILTGLCN-------EKTDVFCFGMLLLEL 252
+L N ++ D++ G++ E+
Sbjct: 183 VLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 46/105 (43%), Gaps = 9/105 (8%)
Query: 154 RHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYN---VAKLSDFSESEYIPEG 210
R +I IG A+ Y+H I +D+K +L+ + KL+DF + E
Sbjct: 161 REASEIXKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFG---FAKET 214
Query: 211 ETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
+H + T Y+APE + ++ D + G++ LL G
Sbjct: 215 TSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLCG 259
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 75/185 (40%), Gaps = 37/185 (20%)
Query: 108 HRNILKLIGCC----IETEIPI-LVFEFVEYG--TLADRICSPHGPHLEPLLWRHRLKIA 160
H N+++L+ C + EI + LVFE V+ T D+ P P +K
Sbjct: 73 HPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPA-------ETIKDL 125
Query: 161 M-EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHML 219
M + + ++H IV +D+K IL KL+DF G + S+ +
Sbjct: 126 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADF--------GLARIYSYQM 174
Query: 220 TRTK-----RYLAPEYILTGLCNEKTDVFCFGMLLLELLTGRRDNILLEHVKKHVENNRL 274
T Y APE +L D++ G + E+ RR + + E ++L
Sbjct: 175 ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF--RRKPLFC----GNSEADQL 228
Query: 275 GEIVD 279
G+I D
Sbjct: 229 GKIFD 233
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 51/125 (40%), Gaps = 27/125 (21%)
Query: 150 PLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILF--DEYNVA----------- 196
P H K+A +I ++ ++H + D+K ILF +Y A
Sbjct: 114 PFRLDHIRKMAYQICKSVNFLH---SNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERT 170
Query: 197 ------KLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLL 250
K+ DF + Y + E H T L + Y APE IL ++ DV+ G +L+
Sbjct: 171 LINPDIKVVDFGSATY--DDEHHST---LVXXRHYRAPEVILALGWSQPCDVWSIGCILI 225
Query: 251 ELLTG 255
E G
Sbjct: 226 EYYLG 230
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 87/209 (41%), Gaps = 39/209 (18%)
Query: 68 KLYKGFLENRPISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGC-----CIETE 122
++++G ++V F E F I + H NIL I T+
Sbjct: 21 EVWRGKWRGEEVAVKIFSSR--EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQ 78
Query: 123 IPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGF-----RRP 177
+ LV ++ E+G+L D + + + +E ++ K+A+ + +A++H+ +
Sbjct: 79 L-WLVSDYHEHGSLFDYL-NRYTVTVEGMI-----KLALSTASGLAHLHMEIVGTQGKPA 131
Query: 178 IVFKDIKLSQILFDEYNVAKLSDF-------SESEYIPEGETHVTSHMLTRTKRYLAPEY 230
I +D+K IL + ++D S ++ I H TKRY+APE
Sbjct: 132 IAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVG-----TKRYMAPE- 185
Query: 231 ILTGLCN-------EKTDVFCFGMLLLEL 252
+L N ++ D++ G++ E+
Sbjct: 186 VLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 87/209 (41%), Gaps = 39/209 (18%)
Query: 68 KLYKGFLENRPISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGC-----CIETE 122
++++G ++V F E F I + H NIL I T+
Sbjct: 24 EVWRGKWRGEEVAVKIFSSR--EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQ 81
Query: 123 IPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGF-----RRP 177
+ LV ++ E+G+L D + + + +E ++ K+A+ + +A++H+ +
Sbjct: 82 L-WLVSDYHEHGSLFDYL-NRYTVTVEGMI-----KLALSTASGLAHLHMEIVGTQGKPA 134
Query: 178 IVFKDIKLSQILFDEYNVAKLSDF-------SESEYIPEGETHVTSHMLTRTKRYLAPEY 230
I +D+K IL + ++D S ++ I H TKRY+APE
Sbjct: 135 IAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVG-----TKRYMAPE- 188
Query: 231 ILTGLCN-------EKTDVFCFGMLLLEL 252
+L N ++ D++ G++ E+
Sbjct: 189 VLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 75/173 (43%), Gaps = 13/173 (7%)
Query: 86 DNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHG 145
D E + I +++H NI+ LI LVFEF+E ++ +
Sbjct: 56 DAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDL--KKVLDENK 113
Query: 146 PHLEPLLWRHRLKIAM-EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSES 204
L+ ++KI + ++ +A+ H + I+ +D+K +L + KL+DF +
Sbjct: 114 TGLQ----DSQIKIYLYQLLRGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLA 166
Query: 205 EYIPEGETHVTSHMLTRTKRYLAPEYIL-TGLCNEKTDVFCFGMLLLELLTGR 256
T ++T Y AP+ ++ + + D++ G + E++TG+
Sbjct: 167 RAFGIPVRSYTHEVVTLW--YRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 32.7 bits (73), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 75/173 (43%), Gaps = 13/173 (7%)
Query: 86 DNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHG 145
D E + I +++H NI+ LI LVFEF+E ++ +
Sbjct: 56 DAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDL--KKVLDENK 113
Query: 146 PHLEPLLWRHRLKIAM-EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSES 204
L+ ++KI + ++ +A+ H + I+ +D+K +L + KL+DF +
Sbjct: 114 TGLQ----DSQIKIYLYQLLRGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLA 166
Query: 205 EYIPEGETHVTSHMLTRTKRYLAPEYIL-TGLCNEKTDVFCFGMLLLELLTGR 256
T ++T Y AP+ ++ + + D++ G + E++TG+
Sbjct: 167 RAFGIPVRSYTHEVVTLW--YRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 32.7 bits (73), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 87/209 (41%), Gaps = 39/209 (18%)
Query: 68 KLYKGFLENRPISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGC-----CIETE 122
++++G ++V F E F I + H NIL I T+
Sbjct: 44 EVWRGKWRGEEVAVKIFSSR--EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQ 101
Query: 123 IPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGF-----RRP 177
+ LV ++ E+G+L D + + + +E ++ K+A+ + +A++H+ +
Sbjct: 102 L-WLVSDYHEHGSLFDYL-NRYTVTVEGMI-----KLALSTASGLAHLHMEIVGTQGKPA 154
Query: 178 IVFKDIKLSQILFDEYNVAKLSDF-------SESEYIPEGETHVTSHMLTRTKRYLAPEY 230
I +D+K IL + ++D S ++ I H TKRY+APE
Sbjct: 155 IAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVG-----TKRYMAPE- 208
Query: 231 ILTGLCN-------EKTDVFCFGMLLLEL 252
+L N ++ D++ G++ E+
Sbjct: 209 VLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 73/177 (41%), Gaps = 27/177 (15%)
Query: 106 MNHRNILKLIGCCIETEIPI--------LVFEFVEY---GTLADRICSPHGPHLEPLLWR 154
+ H N++ LI C P LVF+F E+ G L++ + ++
Sbjct: 74 LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIK----- 128
Query: 155 HRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHV 214
++ + N + YIH R I+ +D+K + +L V KL+DF + +
Sbjct: 129 ---RVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQ 182
Query: 215 TSHMLTR--TKRYLAPEYILTGL-CNEKTDVFCFGMLLLELLTGRRDNILLEHVKKH 268
+ R T Y PE +L D++ G ++ E+ T R I+ + ++H
Sbjct: 183 PNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT--RSPIMQGNTEQH 237
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 32.3 bits (72), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 73/177 (41%), Gaps = 27/177 (15%)
Query: 106 MNHRNILKLIGCCIETEIPI--------LVFEFVEY---GTLADRICSPHGPHLEPLLWR 154
+ H N++ LI C P LVF+F E+ G L++ + ++
Sbjct: 74 LKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIK----- 128
Query: 155 HRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHV 214
++ + N + YIH R I+ +D+K + +L V KL+DF + +
Sbjct: 129 ---RVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQ 182
Query: 215 TSHMLTR--TKRYLAPEYILTGL-CNEKTDVFCFGMLLLELLTGRRDNILLEHVKKH 268
+ R T Y PE +L D++ G ++ E+ T R I+ + ++H
Sbjct: 183 PNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT--RSPIMQGNTEQH 237
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 32.3 bits (72), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 73/177 (41%), Gaps = 27/177 (15%)
Query: 106 MNHRNILKLIGCCIETEIPI--------LVFEFVEY---GTLADRICSPHGPHLEPLLWR 154
+ H N++ LI C P LVF+F E+ G L++ + ++
Sbjct: 74 LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIK----- 128
Query: 155 HRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHV 214
++ + N + YIH R I+ +D+K + +L V KL+DF + +
Sbjct: 129 ---RVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQ 182
Query: 215 TSHMLTR--TKRYLAPEYILTGL-CNEKTDVFCFGMLLLELLTGRRDNILLEHVKKH 268
+ R T Y PE +L D++ G ++ E+ T R I+ + ++H
Sbjct: 183 PNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT--RSPIMQGNTEQH 237
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 32.3 bits (72), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 68/177 (38%), Gaps = 23/177 (12%)
Query: 88 YSENGENFCFN---NIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSP- 143
Y E GE N I+ + H NI++ + +V E+ G L +RIC+
Sbjct: 51 YIERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAG 110
Query: 144 HGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLS---- 199
E + +L + +AM H +D+KL L D +L
Sbjct: 111 RFSEDEARFFFQQLISGVSYCHAMQVCH---------RDLKLENTLLDGSPAPRLKICAF 161
Query: 200 DFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEK-TDVFCFGMLLLELLTG 255
+S+S + H T Y+APE +L + K DV+ G+ L +L G
Sbjct: 162 GYSKSSVL-----HSQPKDTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 32.3 bits (72), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 87/209 (41%), Gaps = 39/209 (18%)
Query: 68 KLYKGFLENRPISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGC-----CIETE 122
++++G ++V F E F I + H NIL I T+
Sbjct: 57 EVWRGKWRGEEVAVKIFSSR--EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQ 114
Query: 123 IPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGF-----RRP 177
+ LV ++ E+G+L D + + + +E ++ K+A+ + +A++H+ +
Sbjct: 115 L-WLVSDYHEHGSLFDYL-NRYTVTVEGMI-----KLALSTASGLAHLHMEIVGTQGKPA 167
Query: 178 IVFKDIKLSQILFDEYNVAKLSDF-------SESEYIPEGETHVTSHMLTRTKRYLAPEY 230
I +D+K IL + ++D S ++ I H TKRY+APE
Sbjct: 168 IAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVG-----TKRYMAPE- 221
Query: 231 ILTGLCN-------EKTDVFCFGMLLLEL 252
+L N ++ D++ G++ E+
Sbjct: 222 VLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 32.3 bits (72), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 73/177 (41%), Gaps = 27/177 (15%)
Query: 106 MNHRNILKLIGCCIETEIPI--------LVFEFVEY---GTLADRICSPHGPHLEPLLWR 154
+ H N++ LI C P LVF+F E+ G L++ + ++
Sbjct: 73 LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIK----- 127
Query: 155 HRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHV 214
++ + N + YIH R I+ +D+K + +L V KL+DF + +
Sbjct: 128 ---RVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQ 181
Query: 215 TSHMLTR--TKRYLAPEYILTGL-CNEKTDVFCFGMLLLELLTGRRDNILLEHVKKH 268
+ R T Y PE +L D++ G ++ E+ T R I+ + ++H
Sbjct: 182 PNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT--RSPIMQGNTEQH 236
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 32.0 bits (71), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Query: 178 IVFKDIKLSQILFDEYNVAKLSDFSESEYIP-EGETHVTSHMLTRTKRYLAPEYILTGLC 236
++ +D+KL + ++ K+ DF + I +GE L T Y+APE +
Sbjct: 163 VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---KKXLCGTPNYIAPEVLCKKGH 219
Query: 237 NEKTDVFCFGMLLLELLTGR 256
+ + D++ G +L LL G+
Sbjct: 220 SFEVDIWSLGCILYTLLVGK 239
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 32.0 bits (71), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 75/185 (40%), Gaps = 37/185 (20%)
Query: 108 HRNILKLIGCC----IETEIPI-LVFEFVEYG--TLADRICSPHGPHLEPLLWRHRLKIA 160
H N+++L+ C + EI + LVFE V+ T D+ P P +K
Sbjct: 65 HPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPA-------ETIKDL 117
Query: 161 M-EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHML 219
M + + ++H IV +D+K IL KL+DF G + S+ +
Sbjct: 118 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADF--------GLARIYSYQM 166
Query: 220 TR-----TKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTGRRDNILLEHVKKHVENNRL 274
T Y APE +L D++ G + E+ RR + + E ++L
Sbjct: 167 ALFPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF--RRKPLFC----GNSEADQL 220
Query: 275 GEIVD 279
G+I D
Sbjct: 221 GKIFD 225
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 32.0 bits (71), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 75/185 (40%), Gaps = 37/185 (20%)
Query: 108 HRNILKLIGCC----IETEIPI-LVFEFVEYG--TLADRICSPHGPHLEPLLWRHRLKIA 160
H N+++L+ C + EI + LVFE V+ T D+ P P +K
Sbjct: 65 HPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPA-------ETIKDL 117
Query: 161 M-EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHML 219
M + + ++H IV +D+K IL KL+DF G + S+ +
Sbjct: 118 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADF--------GLARIYSYQM 166
Query: 220 TR-----TKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTGRRDNILLEHVKKHVENNRL 274
T Y APE +L D++ G + E+ RR + + E ++L
Sbjct: 167 ALAPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF--RRKPLFC----GNSEADQL 220
Query: 275 GEIVD 279
G+I D
Sbjct: 221 GKIFD 225
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 32.0 bits (71), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 75/173 (43%), Gaps = 12/173 (6%)
Query: 86 DNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPI-LVFEFVEYGTLADRICSPH 144
D +E + I ++NH NI+KL+ I TE + LVFEF+ + L D + +
Sbjct: 39 DTETEGVPSTAIREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFL-HQDLKDFMDASA 96
Query: 145 GPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSES 204
+ L + L ++ +A+ H ++ +D+K +L + KL+DF +
Sbjct: 97 LTGIPLPLIKSYL---FQLLQGLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLA 150
Query: 205 EYIPEGETHVTSHMLTRTKRYLAPEYILT-GLCNEKTDVFCFGMLLLELLTGR 256
G T T Y APE +L + D++ G + E++T R
Sbjct: 151 RAF--GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 32.0 bits (71), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 75/185 (40%), Gaps = 37/185 (20%)
Query: 108 HRNILKLIGCC----IETEIPI-LVFEFVEYG--TLADRICSPHGPHLEPLLWRHRLKIA 160
H N+++L+ C + EI + LVFE V+ T D+ P P +K
Sbjct: 65 HPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPA-------ETIKDL 117
Query: 161 M-EIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHML 219
M + + ++H IV +D+K IL KL+DF G + S+ +
Sbjct: 118 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADF--------GLARIYSYQM 166
Query: 220 TR-----TKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTGRRDNILLEHVKKHVENNRL 274
T Y APE +L D++ G + E+ RR + + E ++L
Sbjct: 167 ALDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF--RRKPLFC----GNSEADQL 220
Query: 275 GEIVD 279
G+I D
Sbjct: 221 GKIFD 225
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 32.0 bits (71), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 72/173 (41%), Gaps = 12/173 (6%)
Query: 86 DNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPI-LVFEFVEYGTLADRICSPH 144
D +E + I ++NH NI+KL+ I TE + LVFEF+ S
Sbjct: 39 DTETEGVPSTAIREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASAL 97
Query: 145 GPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSES 204
PL+ + ++ +A+ H ++ +D+K +L + KL+DF +
Sbjct: 98 TGIPLPLIKSYLFQLL----QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Query: 205 EYIPEGETHVTSHMLTRTKRYLAPEYIL-TGLCNEKTDVFCFGMLLLELLTGR 256
T ++T Y APE +L + D++ G + E++T R
Sbjct: 151 RAFGVPVRTYTHEVVTLW--YRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 32.0 bits (71), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 72/173 (41%), Gaps = 12/173 (6%)
Query: 86 DNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPI-LVFEFVEYGTLADRICSPH 144
D +E + I ++NH NI+KL+ I TE + LVFEF+ S
Sbjct: 46 DTETEGVPSTAIREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASAL 104
Query: 145 GPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSES 204
PL+ + ++ +A+ H ++ +D+K +L + KL+DF +
Sbjct: 105 TGIPLPLIKSYLFQLL----QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA 157
Query: 205 EYIPEGETHVTSHMLTRTKRYLAPEYIL-TGLCNEKTDVFCFGMLLLELLTGR 256
T ++T Y APE +L + D++ G + E++T R
Sbjct: 158 RAFGVPVRTYTHEVVTLW--YRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 32.0 bits (71), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 74/173 (42%), Gaps = 12/173 (6%)
Query: 86 DNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPI-LVFEFVEYGTLADRICSPH 144
D +E + I ++NH NI+KL+ I TE + LVFEF+ L D + +
Sbjct: 41 DTETEGVPSTAIREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLSMD-LKDFMDASA 98
Query: 145 GPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSES 204
+ L + L ++ +A+ H ++ +D+K +L + KL+DF +
Sbjct: 99 LTGIPLPLIKSYL---FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA 152
Query: 205 EYIPEGETHVTSHMLTRTKRYLAPEYILT-GLCNEKTDVFCFGMLLLELLTGR 256
G T T Y APE +L + D++ G + E++T R
Sbjct: 153 RAF--GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1LLW|A Chain A, Structural Studies On The Synchronization Of Catalytic
Centers In Glutamate Synthase: Complex With
2-Oxoglutarate
pdb|1LLZ|A Chain A, Structural Studies On The Synchronization Of Catalytic
Centers In Glutamate Synthase: Reduced Enzyme
pdb|1LM1|A Chain A, Structural Studies On The Synchronization Of Catalytic
Centers In Glutamate Synthase: Native Enzyme
pdb|1OFD|A Chain A, Glutamate Synthase From Synechocystis Sp In Complex With
2-Oxoglutarate At 2.0 Angstrom Resolution
pdb|1OFD|B Chain B, Glutamate Synthase From Synechocystis Sp In Complex With
2-Oxoglutarate At 2.0 Angstrom Resolution
pdb|1OFE|A Chain A, Glutamate Synthase From Synechocystis Sp In Complex With
2-Oxoglutarate And L-Don At 2.45 Angstrom Resolution
pdb|1OFE|B Chain B, Glutamate Synthase From Synechocystis Sp In Complex With
2-Oxoglutarate And L-Don At 2.45 Angstrom Resolution
Length = 1520
Score = 32.0 bits (71), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 23/34 (67%), Gaps = 3/34 (8%)
Query: 50 KIATNNYNGHQVIASEHYKLYKGFLENRPISVMK 83
K+ N NG A +HY+LY+ +L++RP++ ++
Sbjct: 813 KVGGNGNNGE---AYDHYELYRQYLKDRPVTALR 843
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 32.0 bits (71), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 72/173 (41%), Gaps = 12/173 (6%)
Query: 86 DNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPI-LVFEFVEYGTLADRICSPH 144
D +E + I ++NH NI+KL+ I TE + LVFEF+ S
Sbjct: 38 DTETEGVPSTAIREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASAL 96
Query: 145 GPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSES 204
PL+ + ++ +A+ H ++ +D+K +L + KL+DF +
Sbjct: 97 TGIPLPLIKSYLFQLL----QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
Query: 205 EYIPEGETHVTSHMLTRTKRYLAPEYILT-GLCNEKTDVFCFGMLLLELLTGR 256
T ++T Y APE +L + D++ G + E++T R
Sbjct: 150 RAFGVPVRTYTHEVVTLW--YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 32.0 bits (71), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 72/173 (41%), Gaps = 12/173 (6%)
Query: 86 DNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPI-LVFEFVEYGTLADRICSPH 144
D +E + I ++NH NI+KL+ I TE + LVFEF+ S
Sbjct: 40 DTETEGVPSTAIREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASAL 98
Query: 145 GPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSES 204
PL+ + ++ +A+ H ++ +D+K +L + KL+DF +
Sbjct: 99 TGIPLPLIKSYLFQLL----QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA 151
Query: 205 EYIPEGETHVTSHMLTRTKRYLAPEYILT-GLCNEKTDVFCFGMLLLELLTGR 256
T ++T Y APE +L + D++ G + E++T R
Sbjct: 152 RAFGVPVRTYTHEVVTLW--YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 31.6 bits (70), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 72/173 (41%), Gaps = 12/173 (6%)
Query: 86 DNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPI-LVFEFVEYGTLADRICSPH 144
D +E + I ++NH NI+KL+ I TE + LVFEF+ S
Sbjct: 39 DTETEGVPSTAIREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASAL 97
Query: 145 GPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSES 204
PL+ + ++ +A+ H ++ +D+K +L + KL+DF +
Sbjct: 98 TGIPLPLIKSYLFQLL----QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Query: 205 EYIPEGETHVTSHMLTRTKRYLAPEYILT-GLCNEKTDVFCFGMLLLELLTGR 256
T ++T Y APE +L + D++ G + E++T R
Sbjct: 151 RAFGVPVRTYTHEVVTLW--YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 31.6 bits (70), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 72/173 (41%), Gaps = 12/173 (6%)
Query: 86 DNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPI-LVFEFVEYGTLADRICSPH 144
D +E + I ++NH NI+KL+ I TE + LVFEF+ S
Sbjct: 38 DTETEGVPSTAIREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASAL 96
Query: 145 GPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSES 204
PL+ + ++ +A+ H ++ +D+K +L + KL+DF +
Sbjct: 97 TGIPLPLIKSYLFQLL----QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
Query: 205 EYIPEGETHVTSHMLTRTKRYLAPEYILT-GLCNEKTDVFCFGMLLLELLTGR 256
T ++T Y APE +L + D++ G + E++T R
Sbjct: 150 RAFGVPVRTYTHEVVTLW--YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 31.6 bits (70), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 71/173 (41%), Gaps = 12/173 (6%)
Query: 86 DNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPI-LVFEFVEYGTLADRICSPH 144
D +E + I ++NH NI+KL+ I TE + LVFEF+ S
Sbjct: 42 DTETEGVPSTAIREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLSMDLKKFMDASAL 100
Query: 145 GPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSES 204
PL+ + ++ +A+ H ++ +D+K +L + KL+DF +
Sbjct: 101 TGIPLPLIKSYLFQLL----QGLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLA 153
Query: 205 EYIPEGETHVTSHMLTRTKRYLAPEYILT-GLCNEKTDVFCFGMLLLELLTGR 256
G T T Y APE +L + D++ G + E++T R
Sbjct: 154 RAF--GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 31.6 bits (70), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 71/173 (41%), Gaps = 12/173 (6%)
Query: 86 DNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPI-LVFEFVEYGTLADRICSPH 144
D +E + I ++NH NI+KL+ I TE + LVFEF+ S
Sbjct: 39 DTETEGVPSTAIREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASAL 97
Query: 145 GPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSES 204
PL+ + ++ +A+ H ++ +D+K +L + KL+DF +
Sbjct: 98 TGIPLPLIKSYLFQLL----QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Query: 205 EYIPEGETHVTSHMLTRTKRYLAPEYILT-GLCNEKTDVFCFGMLLLELLTGR 256
G T T Y APE +L + D++ G + E++T R
Sbjct: 151 RAF--GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 31.6 bits (70), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 72/173 (41%), Gaps = 12/173 (6%)
Query: 86 DNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPI-LVFEFVEYGTLADRICSPH 144
D +E + I ++NH NI+KL+ I TE + LVFEF+ S
Sbjct: 39 DTETEGVPSTAIREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASAL 97
Query: 145 GPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSES 204
PL+ + ++ +A+ H ++ +D+K +L + KL+DF +
Sbjct: 98 TGIPLPLIKSYLFQLL----QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Query: 205 EYIPEGETHVTSHMLTRTKRYLAPEYILT-GLCNEKTDVFCFGMLLLELLTGR 256
T ++T Y APE +L + D++ G + E++T R
Sbjct: 151 RAFGVPVRTYTHEVVTLW--YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 31.6 bits (70), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 71/173 (41%), Gaps = 12/173 (6%)
Query: 86 DNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPI-LVFEFVEYGTLADRICSPH 144
D +E + I ++NH NI+KL+ I TE + LVFEF+ S
Sbjct: 40 DTETEGVPSTAIREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLSMDLKKFMDASAL 98
Query: 145 GPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSES 204
PL+ + ++ +A+ H ++ +D+K +L + KL+DF +
Sbjct: 99 TGIPLPLIKSYLFQLL----QGLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLA 151
Query: 205 EYIPEGETHVTSHMLTRTKRYLAPEYILT-GLCNEKTDVFCFGMLLLELLTGR 256
G T T Y APE +L + D++ G + E++T R
Sbjct: 152 RAF--GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 31.6 bits (70), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 72/173 (41%), Gaps = 12/173 (6%)
Query: 86 DNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPI-LVFEFVEYGTLADRICSPH 144
D +E + I ++NH NI+KL+ I TE + LVFEF+ S
Sbjct: 43 DTETEGVPSTAIREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASAL 101
Query: 145 GPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSES 204
PL+ + ++ +A+ H ++ +D+K +L + KL+DF +
Sbjct: 102 TGIPLPLIKSYLFQLL----QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA 154
Query: 205 EYIPEGETHVTSHMLTRTKRYLAPEYILT-GLCNEKTDVFCFGMLLLELLTGR 256
T ++T Y APE +L + D++ G + E++T R
Sbjct: 155 RAFGVPVRTYTHEVVTLW--YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|2CM1|A Chain A, Crystal Structure Of The Catalytic Domain Of Serine
Threonine Protein Phosphatase Pstp In Complex With 2
Manganese Ions
Length = 260
Score = 31.6 bits (70), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Query: 164 GNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETH 213
GN + +HIG R + +D +L+QI D+ V L D E PE E H
Sbjct: 128 GNRLGLVHIGDSRGYLLRDGELTQITKDDTFVQTLVD--EGRITPE-EAH 174
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 31.6 bits (70), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 71/173 (41%), Gaps = 12/173 (6%)
Query: 86 DNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPI-LVFEFVEYGTLADRICSPH 144
D +E + I ++NH NI+KL+ I TE + LVFEF+ S
Sbjct: 40 DTETEGVPSTAIREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASAL 98
Query: 145 GPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSES 204
PL+ + ++ +A+ H ++ +D+K +L + KL+DF +
Sbjct: 99 TGIPLPLIKSYLFQLL----QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA 151
Query: 205 EYIPEGETHVTSHMLTRTKRYLAPEYILT-GLCNEKTDVFCFGMLLLELLTGR 256
G T T Y APE +L + D++ G + E++T R
Sbjct: 152 RAF--GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 31.6 bits (70), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 71/173 (41%), Gaps = 12/173 (6%)
Query: 86 DNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPI-LVFEFVEYGTLADRICSPH 144
D +E + I ++NH NI+KL+ I TE + LVFEF+ S
Sbjct: 39 DTETEGVPSTAIREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASAL 97
Query: 145 GPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSES 204
PL+ + ++ +A+ H ++ +D+K +L + KL+DF +
Sbjct: 98 TGIPLPLIKSYLFQLL----QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Query: 205 EYIPEGETHVTSHMLTRTKRYLAPEYILT-GLCNEKTDVFCFGMLLLELLTGR 256
G T T Y APE +L + D++ G + E++T R
Sbjct: 151 RAF--GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 31.6 bits (70), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 71/173 (41%), Gaps = 12/173 (6%)
Query: 86 DNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPI-LVFEFVEYGTLADRICSPH 144
D +E + I ++NH NI+KL+ I TE + LVFEF+ S
Sbjct: 42 DTETEGVPSTAIREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASAL 100
Query: 145 GPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSES 204
PL+ + ++ +A+ H ++ +D+K +L + KL+DF +
Sbjct: 101 TGIPLPLIKSYLFQLL----QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA 153
Query: 205 EYIPEGETHVTSHMLTRTKRYLAPEYILT-GLCNEKTDVFCFGMLLLELLTGR 256
G T T Y APE +L + D++ G + E++T R
Sbjct: 154 RAF--GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 31.6 bits (70), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 15/102 (14%)
Query: 159 IAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHM 218
IA++ + + Y+H +DIK IL D +L+DF + E T V S +
Sbjct: 186 IAIDSVHQLHYVH---------RDIKPDNILMDMNGHIRLADFGSCLKLMEDGT-VQSSV 235
Query: 219 LTRTKRYLAPEYILT-----GLCNEKTDVFCFGMLLLELLTG 255
T Y++PE + G + D + G+ + E+L G
Sbjct: 236 AVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYG 277
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 31.6 bits (70), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 71/173 (41%), Gaps = 12/173 (6%)
Query: 86 DNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPI-LVFEFVEYGTLADRICSPH 144
D +E + I ++NH NI+KL+ I TE + LVFEF+ S
Sbjct: 42 DTETEGVPSTAIREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASAL 100
Query: 145 GPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSES 204
PL+ + ++ +A+ H ++ +D+K +L + KL+DF +
Sbjct: 101 TGIPLPLIKSYLFQLL----QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA 153
Query: 205 EYIPEGETHVTSHMLTRTKRYLAPEYILT-GLCNEKTDVFCFGMLLLELLTGR 256
G T T Y APE +L + D++ G + E++T R
Sbjct: 154 RAF--GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 31.6 bits (70), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 71/173 (41%), Gaps = 12/173 (6%)
Query: 86 DNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPI-LVFEFVEYGTLADRICSPH 144
D +E + I ++NH NI+KL+ I TE + LVFEF+ S
Sbjct: 41 DTETEGVPSTAIREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASAL 99
Query: 145 GPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSES 204
PL+ + ++ +A+ H ++ +D+K +L + KL+DF +
Sbjct: 100 TGIPLPLIKSYLFQLL----QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA 152
Query: 205 EYIPEGETHVTSHMLTRTKRYLAPEYILT-GLCNEKTDVFCFGMLLLELLTGR 256
G T T Y APE +L + D++ G + E++T R
Sbjct: 153 RAF--GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 31.6 bits (70), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 74/173 (42%), Gaps = 12/173 (6%)
Query: 86 DNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPI-LVFEFVEYGTLADRICSPH 144
D +E + I ++NH NI+KL+ I TE + LVFEF+ L D + +
Sbjct: 42 DTETEGVPSTAIREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLSMD-LKDFMDASA 99
Query: 145 GPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSES 204
+ L + L ++ +A+ H ++ +D+K +L + KL+DF +
Sbjct: 100 LTGIPLPLIKSYL---FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA 153
Query: 205 EYIPEGETHVTSHMLTRTKRYLAPEYILT-GLCNEKTDVFCFGMLLLELLTGR 256
G T T Y APE +L + D++ G + E++T R
Sbjct: 154 RAF--GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 31.6 bits (70), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 74/175 (42%), Gaps = 16/175 (9%)
Query: 86 DNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPI-LVFEFV--EYGTLADRICS 142
D +E + I ++NH NI+KL+ I TE + LVFE V + T D
Sbjct: 38 DTETEGVPSTAIREISLLKELNHPNIVKLLD-VIHTENKLYLVFEHVHQDLKTFMDASAL 96
Query: 143 PHGPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFS 202
P PL+ + ++ +A+ H ++ +D+K +L + KL+DF
Sbjct: 97 TGIP--LPLIKSYLFQLL----QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFG 147
Query: 203 ESEYIPEGETHVTSHMLTRTKRYLAPEYILT-GLCNEKTDVFCFGMLLLELLTGR 256
+ T ++T Y APE +L + D++ G + E++T R
Sbjct: 148 LARAFGVPVRTYTHEVVTLW--YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 31.6 bits (70), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 71/173 (41%), Gaps = 12/173 (6%)
Query: 86 DNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPI-LVFEFVEYGTLADRICSPH 144
D +E + I ++NH NI+KL+ I TE + LVFEF+ S
Sbjct: 40 DTETEGVPSTAIREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASAL 98
Query: 145 GPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSES 204
PL+ + ++ +A+ H ++ +D+K +L + KL+DF +
Sbjct: 99 TGIPLPLIKSYLFQLL----QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA 151
Query: 205 EYIPEGETHVTSHMLTRTKRYLAPEYILT-GLCNEKTDVFCFGMLLLELLTGR 256
G T T Y APE +L + D++ G + E++T R
Sbjct: 152 RAF--GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 31.6 bits (70), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 72/173 (41%), Gaps = 12/173 (6%)
Query: 86 DNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPI-LVFEFVEYGTLADRICSPH 144
D +E + I ++NH NI+KL+ I TE + LVFEF+ S
Sbjct: 46 DTETEGVPSTAIREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASAL 104
Query: 145 GPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSES 204
PL+ + ++ +A+ H ++ +D+K +L + KL+DF +
Sbjct: 105 TGIPLPLIKSYLFQLL----QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA 157
Query: 205 EYIPEGETHVTSHMLTRTKRYLAPEYILT-GLCNEKTDVFCFGMLLLELLTGR 256
T ++T Y APE +L + D++ G + E++T R
Sbjct: 158 RAFGVPVRTYTHEVVTLW--YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 31.6 bits (70), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 71/173 (41%), Gaps = 12/173 (6%)
Query: 86 DNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPI-LVFEFVEYGTLADRICSPH 144
D +E + I ++NH NI+KL+ I TE + LVFEF+ S
Sbjct: 39 DTETEGVPSTAIREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASAL 97
Query: 145 GPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSES 204
PL+ + ++ +A+ H ++ +D+K +L + KL+DF +
Sbjct: 98 TGIPLPLIKSYLFQLL----QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Query: 205 EYIPEGETHVTSHMLTRTKRYLAPEYILT-GLCNEKTDVFCFGMLLLELLTGR 256
G T T Y APE +L + D++ G + E++T R
Sbjct: 151 RAF--GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 31.6 bits (70), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 71/173 (41%), Gaps = 12/173 (6%)
Query: 86 DNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPI-LVFEFVEYGTLADRICSPH 144
D +E + I ++NH NI+KL+ I TE + LVFEF+ S
Sbjct: 38 DTETEGVPSTAIREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASAL 96
Query: 145 GPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSES 204
PL+ + ++ +A+ H ++ +D+K +L + KL+DF +
Sbjct: 97 TGIPLPLIKSYLFQLL----QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
Query: 205 EYIPEGETHVTSHMLTRTKRYLAPEYILT-GLCNEKTDVFCFGMLLLELLTGR 256
G T T Y APE +L + D++ G + E++T R
Sbjct: 150 RAF--GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 31.6 bits (70), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 72/173 (41%), Gaps = 12/173 (6%)
Query: 86 DNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPI-LVFEFVEYGTLADRICSPH 144
D +E + I ++NH NI+KL+ I TE + LVFEF+ S
Sbjct: 39 DTETEGVPSTAIREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASAL 97
Query: 145 GPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSES 204
PL+ + ++ +A+ H ++ +D+K +L + KL+DF +
Sbjct: 98 TGIPLPLIKSYLFQLL----QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Query: 205 EYIPEGETHVTSHMLTRTKRYLAPEYILT-GLCNEKTDVFCFGMLLLELLTGR 256
T ++T Y APE +L + D++ G + E++T R
Sbjct: 151 RAFGVPVRTYTHEVVTLW--YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 31.6 bits (70), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 72/173 (41%), Gaps = 12/173 (6%)
Query: 86 DNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPI-LVFEFVEYGTLADRICSPH 144
D +E + I ++NH NI+KL+ I TE + LVFEF+ S
Sbjct: 38 DTETEGVPSTAIREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASAL 96
Query: 145 GPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSES 204
PL+ + ++ +A+ H ++ +D+K +L + KL+DF +
Sbjct: 97 TGIPLPLIKSYLFQLL----QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
Query: 205 EYIPEGETHVTSHMLTRTKRYLAPEYILT-GLCNEKTDVFCFGMLLLELLTGR 256
T ++T Y APE +L + D++ G + E++T R
Sbjct: 150 RAFGVPVRTYTHEVVTLW--YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 31.6 bits (70), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 71/173 (41%), Gaps = 12/173 (6%)
Query: 86 DNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPI-LVFEFVEYGTLADRICSPH 144
D +E + I ++NH NI+KL+ I TE + LVFEF+ S
Sbjct: 39 DTETEGVPSTAIREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASAL 97
Query: 145 GPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSES 204
PL+ + ++ +A+ H ++ +D+K +L + KL+DF +
Sbjct: 98 TGIPLPLIKSYLFQLL----QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Query: 205 EYIPEGETHVTSHMLTRTKRYLAPEYILT-GLCNEKTDVFCFGMLLLELLTGR 256
G T T Y APE +L + D++ G + E++T R
Sbjct: 151 RAF--GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 31.6 bits (70), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 71/173 (41%), Gaps = 12/173 (6%)
Query: 86 DNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPI-LVFEFVEYGTLADRICSPH 144
D +E + I ++NH NI+KL+ I TE + LVFEF+ S
Sbjct: 38 DTETEGVPSTAIREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASAL 96
Query: 145 GPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSES 204
PL+ + ++ +A+ H ++ +D+K +L + KL+DF +
Sbjct: 97 TGIPLPLIKSYLFQLL----QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
Query: 205 EYIPEGETHVTSHMLTRTKRYLAPEYILT-GLCNEKTDVFCFGMLLLELLTGR 256
G T T Y APE +L + D++ G + E++T R
Sbjct: 150 RAF--GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 31.6 bits (70), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 70/161 (43%), Gaps = 14/161 (8%)
Query: 98 NNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRL 157
N I Q++H ++ L + +L+ EF+ G L DRI + E + + +
Sbjct: 97 NEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINY-M 155
Query: 158 KIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVA--KLSDFSESEYI-PEGETHV 214
+ A E + ++H IV DIK I+ + + K+ DF + + P+ V
Sbjct: 156 RQACE---GLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKV 209
Query: 215 TSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
T T T + APE + TD++ G+L LL+G
Sbjct: 210 T----TATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSG 246
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 31.6 bits (70), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 71/173 (41%), Gaps = 12/173 (6%)
Query: 86 DNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPI-LVFEFVEYGTLADRICSPH 144
D +E + I ++NH NI+KL+ I TE + LVFEF+ S
Sbjct: 41 DTETEGVPSTAIREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASAL 99
Query: 145 GPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSES 204
PL+ + ++ +A+ H ++ +D+K +L + KL+DF +
Sbjct: 100 TGIPLPLIKSYLFQLL----QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA 152
Query: 205 EYIPEGETHVTSHMLTRTKRYLAPEYILT-GLCNEKTDVFCFGMLLLELLTGR 256
G T T Y APE +L + D++ G + E++T R
Sbjct: 153 RAF--GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 31.6 bits (70), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 68/156 (43%), Gaps = 20/156 (12%)
Query: 107 NHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLK--IAMEIG 164
H NI+ L + + LV E + G L D+I L + R + IG
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKI-------LRQKFFSEREASFVLHTIG 131
Query: 165 NAMAYIHIGFRRPIVFKDIKLSQILF-DEYN---VAKLSDFSESEYI-PEGETHVTSHML 219
+ Y+H + +V +D+K S IL+ DE ++ DF ++ + E +T
Sbjct: 132 KTVEYLH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTP--- 185
Query: 220 TRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
T ++APE + +E D++ G+LL +L G
Sbjct: 186 CYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 31.6 bits (70), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 71/173 (41%), Gaps = 12/173 (6%)
Query: 86 DNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPI-LVFEFVEYGTLADRICSPH 144
D +E + I ++NH NI+KL+ I TE + LVFEF+ S
Sbjct: 43 DTETEGVPSTAIREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASAL 101
Query: 145 GPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSES 204
PL+ + ++ +A+ H ++ +D+K +L + KL+DF +
Sbjct: 102 TGIPLPLIKSYLFQLL----QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA 154
Query: 205 EYIPEGETHVTSHMLTRTKRYLAPEYILT-GLCNEKTDVFCFGMLLLELLTGR 256
G T T Y APE +L + D++ G + E++T R
Sbjct: 155 RAF--GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|1TXO|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis
SerineTHREONINE PHOSPHATASE PSTPPPP AT 1.95 A.
pdb|1TXO|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis
SerineTHREONINE PHOSPHATASE PSTPPPP AT 1.95 A
Length = 237
Score = 31.6 bits (70), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Query: 164 GNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETH 213
GN + +HIG R + +D +L+QI D+ V L D E PE E H
Sbjct: 105 GNRLGLVHIGDSRGYLLRDGELTQITKDDTFVQTLVD--EGRITPE-EAH 151
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 31.6 bits (70), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 71/173 (41%), Gaps = 12/173 (6%)
Query: 86 DNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPI-LVFEFVEYGTLADRICSPH 144
D +E + I ++NH NI+KL+ I TE + LVFEF+ S
Sbjct: 40 DTETEGVPSTAIREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASAL 98
Query: 145 GPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSES 204
PL+ + ++ +A+ H ++ +D+K +L + KL+DF +
Sbjct: 99 TGIPLPLIKSYLFQLL----QGLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLA 151
Query: 205 EYIPEGETHVTSHMLTRTKRYLAPEYILT-GLCNEKTDVFCFGMLLLELLTGR 256
G T T Y APE +L + D++ G + E++T R
Sbjct: 152 RAF--GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 31.2 bits (69), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Query: 178 IVFKDIKLSQILFDEYNVAKLSDFSESEYIP-EGETHVTSHMLTRTKRYLAPEYILTGLC 236
++ +D+KL + ++ K+ DF + I +GE L T Y+APE +
Sbjct: 163 VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKD---LCGTPNYIAPEVLCKKGH 219
Query: 237 NEKTDVFCFGMLLLELLTGR 256
+ + D++ G +L LL G+
Sbjct: 220 SFEVDIWSLGCILYTLLVGK 239
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 31.2 bits (69), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 71/173 (41%), Gaps = 12/173 (6%)
Query: 86 DNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPI-LVFEFVEYGTLADRICSPH 144
D +E + I ++NH NI+KL+ I TE + LVFEF+ S
Sbjct: 41 DTETEGVPSTAIREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASAL 99
Query: 145 GPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSES 204
PL+ + ++ +A+ H ++ +D+K +L + KL+DF +
Sbjct: 100 TGIPLPLIKSYLFQLL----QGLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLA 152
Query: 205 EYIPEGETHVTSHMLTRTKRYLAPEYILT-GLCNEKTDVFCFGMLLLELLTGR 256
G T T Y APE +L + D++ G + E++T R
Sbjct: 153 RAF--GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 31.2 bits (69), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 68/156 (43%), Gaps = 20/156 (12%)
Query: 107 NHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLK--IAMEIG 164
H NI+ L + + LV E + G L D+I L + R + IG
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKI-------LRQKFFSEREASFVLHTIG 131
Query: 165 NAMAYIHIGFRRPIVFKDIKLSQILF-DEYN---VAKLSDFSESEYI-PEGETHVTSHML 219
+ Y+H + +V +D+K S IL+ DE ++ DF ++ + E +T
Sbjct: 132 KTVEYLH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTP--- 185
Query: 220 TRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
T ++APE + +E D++ G+LL +L G
Sbjct: 186 CYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 31.2 bits (69), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Query: 178 IVFKDIKLSQILFDEYNVAKLSDFSESEYIP-EGETHVTSHMLTRTKRYLAPEYILTGLC 236
++ +D+KL + ++ K+ DF + I +GE L T Y+APE +
Sbjct: 147 VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKD---LCGTPNYIAPEVLCKKGH 203
Query: 237 NEKTDVFCFGMLLLELLTGR 256
+ + D++ G +L LL G+
Sbjct: 204 SFEVDIWSLGCILYTLLVGK 223
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 31.2 bits (69), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 46/84 (54%), Gaps = 8/84 (9%)
Query: 87 NYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGP 146
NYSE+ F ++++H++++ G C+ + ILV EFV++G+L +
Sbjct: 54 NYSES----FFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYL--KKNK 107
Query: 147 HLEPLLWRHRLKIAMEIGNAMAYI 170
+ +LW +L++A ++ AM ++
Sbjct: 108 NCINILW--KLEVAKQLAAAMHFL 129
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 31.2 bits (69), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 5/82 (6%)
Query: 150 PLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPE 209
PL LKI + A+ ++H + PI+ +D+K+ +L KL DF + I
Sbjct: 132 PLSCDTVLKIFYQTCRAVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTI-- 188
Query: 210 GETHVTSHMLTRTKRYLAPEYI 231
+H + + +R L E I
Sbjct: 189 --SHYPDYSWSAQRRALVEEEI 208
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 31.2 bits (69), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 84/195 (43%), Gaps = 21/195 (10%)
Query: 69 LYKGF--LENRPISVMKFGDNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPIL 126
+YKG L + +++ + + E + + H NI+ L + L
Sbjct: 18 VYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTL 77
Query: 127 VFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAM-EIGNAMAYIHIGFRRPIVFKDIKL 185
VFE++ D+ + ++ H +K+ + ++ +AY H R+ ++ +D+K
Sbjct: 78 VFEYL------DKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCH---RQKVLHRDLKP 128
Query: 186 SQILFDEYNVAKLSDF--SESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKT--D 241
+L +E KL+DF + ++ IP T T Y P+ IL G + T D
Sbjct: 129 QNLLINERGELKLADFGLARAKSIPTK----TYDNEVVTLWYRPPD-ILLGSTDYSTQID 183
Query: 242 VFCFGMLLLELLTGR 256
++ G + E+ TGR
Sbjct: 184 MWGVGCIFYEMATGR 198
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 71/173 (41%), Gaps = 12/173 (6%)
Query: 86 DNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPI-LVFEFVEYGTLADRICSPH 144
D +E + I ++NH NI+KL+ I TE + LVFE V+ S
Sbjct: 42 DTETEGVPSTAIREISLLKELNHPNIVKLLD-VIHTENKLYLVFEHVDQDLKKFMDASAL 100
Query: 145 GPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSES 204
PL+ + ++ +A+ H ++ +D+K +L + KL+DF +
Sbjct: 101 TGIPLPLIKSYLFQLL----QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA 153
Query: 205 EYIPEGETHVTSHMLTRTKRYLAPEYILT-GLCNEKTDVFCFGMLLLELLTGR 256
G T T Y APE +L + D++ G + E++T R
Sbjct: 154 RAF--GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 72/173 (41%), Gaps = 12/173 (6%)
Query: 86 DNYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPI-LVFEFVEYGTLADRICSPH 144
D +E + I ++NH NI+KL+ I TE + LVFEF+ S
Sbjct: 39 DTETEGVPSTAIREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASAL 97
Query: 145 GPHLEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSES 204
PL+ + ++ +++ H ++ +D+K +L + KL+DF +
Sbjct: 98 TGIPLPLIKSYLFQLL----QGLSFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Query: 205 EYIPEGETHVTSHMLTRTKRYLAPEYILT-GLCNEKTDVFCFGMLLLELLTGR 256
T ++T Y APE +L + D++ G + E++T R
Sbjct: 151 RAFGVPVRTYTHEVVTLW--YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 59/154 (38%), Gaps = 16/154 (10%)
Query: 106 MNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSP-HGPHLEPLLWRHRLKIAMEIG 164
+ H NI++ + ++ E+ G L +RIC+ E + +L +
Sbjct: 73 LRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYC 132
Query: 165 NAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLS--DFSESEYIPEGETHVTSHMLTRT 222
++M H +D+KL L D +L DF Y H T
Sbjct: 133 HSMQICH---------RDLKLENTLLDGSPAPRLKICDFG---YSKSSVLHSQPKSTVGT 180
Query: 223 KRYLAPEYILTGLCNEK-TDVFCFGMLLLELLTG 255
Y+APE +L + K DV+ G+ L +L G
Sbjct: 181 PAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVG 214
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 53/114 (46%), Gaps = 10/114 (8%)
Query: 149 EPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYI- 207
+PL H ++ + Y+H ++ +D+K S +L +E K+ DF + +
Sbjct: 153 QPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLC 209
Query: 208 ---PEGETHVTSHMLTRTKRYLAPEYILT-GLCNEKTDVFCFGMLLLELLTGRR 257
E + +T ++ TR Y APE +L+ + D++ G + E+L R+
Sbjct: 210 TSPAEHQYFMTEYVATRW--YRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 68/155 (43%), Gaps = 13/155 (8%)
Query: 106 MNHRNILKLIGCCIETEIPILVFEFVEYGTLADRIC--SPHGPHLEPLLWRHRLKIAMEI 163
+ H +I++L+ + +VFEF++ L I + G + H ++ +E
Sbjct: 85 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILE- 143
Query: 164 GNAMAYIHIGFRRPIVFKDIKLSQILF---DEYNVAKLSDFSESEYIPEGETHVTSHMLT 220
A+ Y H I+ +D+K +L + KL F + I GE+ + +
Sbjct: 144 --ALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVA--IQLGESGLVAGGRV 196
Query: 221 RTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
T ++APE + + DV+ G++L LL+G
Sbjct: 197 GTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 231
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 68/155 (43%), Gaps = 13/155 (8%)
Query: 106 MNHRNILKLIGCCIETEIPILVFEFVEYGTLADRIC--SPHGPHLEPLLWRHRLKIAMEI 163
+ H +I++L+ + +VFEF++ L I + G + H ++ +E
Sbjct: 83 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILE- 141
Query: 164 GNAMAYIHIGFRRPIVFKDIKLSQILF---DEYNVAKLSDFSESEYIPEGETHVTSHMLT 220
A+ Y H I+ +D+K +L + KL F + I GE+ + +
Sbjct: 142 --ALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVA--IQLGESGLVAGGRV 194
Query: 221 RTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
T ++APE + + DV+ G++L LL+G
Sbjct: 195 GTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 29.6 bits (65), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 53/114 (46%), Gaps = 10/114 (8%)
Query: 149 EPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYI- 207
+PL H ++ + Y+H ++ +D+K S +L +E K+ DF + +
Sbjct: 154 QPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLC 210
Query: 208 ---PEGETHVTSHMLTRTKRYLAPEYILT-GLCNEKTDVFCFGMLLLELLTGRR 257
E + +T ++ TR Y APE +L+ + D++ G + E+L R+
Sbjct: 211 TSPAEHQYFMTEYVATRW--YRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 29.3 bits (64), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Query: 159 IAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHM 218
I ++ +A+ Y+ + + I+ +DIK I+ E KL DF + Y+ G+ T
Sbjct: 135 IFRQLVSAVGYLRL---KDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYT--- 188
Query: 219 LTRTKRYLAPEYIL 232
T Y APE ++
Sbjct: 189 FCGTIEYCAPEVLM 202
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 29.3 bits (64), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 45/84 (53%), Gaps = 8/84 (9%)
Query: 87 NYSENGENFCFNNIVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGP 146
NYSE+ F ++++H++++ G C + ILV EFV++G+L +
Sbjct: 54 NYSES----FFEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYL--KKNK 107
Query: 147 HLEPLLWRHRLKIAMEIGNAMAYI 170
+ +LW +L++A ++ AM ++
Sbjct: 108 NCINILW--KLEVAKQLAWAMHFL 129
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 29.3 bits (64), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 70/159 (44%), Gaps = 15/159 (9%)
Query: 100 IVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYG--TLADRICSPHGPHLEPLLWRHRL 157
I ++ H NI+KL + +LVFE ++ L D +C LE + + L
Sbjct: 51 ISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLD-VCE---GGLESVTAKSFL 106
Query: 158 KIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSH 217
+++ N +AY H R ++ +D+K +L + K++DF + T
Sbjct: 107 ---LQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHE 160
Query: 218 MLTRTKRYLAPEYILTGLCNEKT-DVFCFGMLLLELLTG 255
++T Y AP+ ++ T D++ G + E++ G
Sbjct: 161 IVTLW--YRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 29.3 bits (64), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 48/116 (41%), Gaps = 27/116 (23%)
Query: 159 IAMEIGNAMAYIHIGFRRPIVFKDIKLSQILF---------------DEYNV----AKLS 199
+A ++ A+ ++H + D+K ILF DE +V ++
Sbjct: 142 MAFQLCQAVKFLHDN---KLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVV 198
Query: 200 DFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
DF + + E + + S T+ Y APE IL ++ DV+ G ++ E G
Sbjct: 199 DFGSATFDHEHHSTIVS-----TRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVG 249
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 29.3 bits (64), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 70/159 (44%), Gaps = 15/159 (9%)
Query: 100 IVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYG--TLADRICSPHGPHLEPLLWRHRL 157
I ++ H NI+KL + +LVFE ++ L D +C LE + + L
Sbjct: 51 ISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLD-VCE---GGLESVTAKSFL 106
Query: 158 KIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSH 217
+++ N +AY H R ++ +D+K +L + K++DF + T
Sbjct: 107 ---LQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHE 160
Query: 218 MLTRTKRYLAPEYILTGLCNEKT-DVFCFGMLLLELLTG 255
++T Y AP+ ++ T D++ G + E++ G
Sbjct: 161 VVTLW--YRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 70/159 (44%), Gaps = 15/159 (9%)
Query: 100 IVFAAQMNHRNILKLIGCCIETEIPILVFEFVEYG--TLADRICSPHGPHLEPLLWRHRL 157
I ++ H NI+KL + +LVFE ++ L D +C LE + + L
Sbjct: 51 ISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLD-VCE---GGLESVTAKSFL 106
Query: 158 KIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSH 217
+++ N +AY H R ++ +D+K +L + K++DF + T
Sbjct: 107 ---LQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHE 160
Query: 218 MLTRTKRYLAPEYILTGLCNEKT-DVFCFGMLLLELLTG 255
++T Y AP+ ++ T D++ G + E++ G
Sbjct: 161 VVTLW--YRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 29.3 bits (64), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 52/112 (46%), Gaps = 15/112 (13%)
Query: 150 PLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVA------KLSDFSE 203
PL++ ++ + +G + Y+H R I+ DIK +L + + K++D
Sbjct: 129 PLIYVKQISKQLLLG--LDYMH--RRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGN 184
Query: 204 SEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
+ + E H T+ + TR Y +PE +L D++ L+ EL+TG
Sbjct: 185 ACWYDE---HYTNSIQTR--EYRSPEVLLGAPWGCGADIWSTACLIFELITG 231
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 29.3 bits (64), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 52/112 (46%), Gaps = 15/112 (13%)
Query: 150 PLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVA------KLSDFSE 203
PL++ ++ + +G + Y+H R I+ DIK +L + + K++D
Sbjct: 129 PLIYVKQISKQLLLG--LDYMH--RRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGN 184
Query: 204 SEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
+ + E H T+ + TR Y +PE +L D++ L+ EL+TG
Sbjct: 185 ACWYDE---HYTNSIQTR--EYRSPEVLLGAPWGCGADIWSTACLIFELITG 231
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 29.3 bits (64), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 64/153 (41%), Gaps = 13/153 (8%)
Query: 106 MNHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGN 165
+ H NI++L E LVF+ V G L + I + + H + +E N
Sbjct: 87 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVARE--YYSEADASHCIHQILESVN 144
Query: 166 AMAYIHIGFRRPIVFKDIKLSQILFDEY---NVAKLSDFSESEYIPEGETHVTSHMLTRT 222
+IH + IV +D+K +L KL+DF + + +GE T
Sbjct: 145 ---HIH---QHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEV-QGEQQAW-FGFAGT 196
Query: 223 KRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
YL+PE + + D++ G++L LL G
Sbjct: 197 PGYLSPEVLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 28.9 bits (63), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 66/153 (43%), Gaps = 14/153 (9%)
Query: 107 NHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNA 166
H NI+ L + + +V E ++ G L D+I + R + I
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELMKGGELLDKIL-----RQKFFSEREASAVLFTITKT 128
Query: 167 MAYIHIGFRRPIVFKDIKLSQILF-DEYN---VAKLSDFSESEYIPEGETHVTSHMLTRT 222
+ Y+H + +V +D+K S IL+ DE ++ DF ++ + + + T
Sbjct: 129 VEYLHA---QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYT-- 183
Query: 223 KRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
++APE + + D++ G+LL +LTG
Sbjct: 184 ANFVAPEVLERQGYDAACDIWSLGVLLYTMLTG 216
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 28.9 bits (63), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 13/90 (14%)
Query: 178 IVFKDIKLSQILFDEYNVAKLSDFSESEYIPEG----------ETHVTSHMLTRTKRYLA 227
++ +D+K S +L + K+ DF + I E ++ +T ++ TR Y A
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRW--YRA 190
Query: 228 PEYILTGLCNEKT-DVFCFGMLLLELLTGR 256
PE +LT + DV+ G +L EL R
Sbjct: 191 PEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 28.9 bits (63), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 6/82 (7%)
Query: 179 VFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILT----- 233
V +DIK +L D +L+DF + + T V S + T Y++PE +
Sbjct: 197 VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGT-VQSSVAVGTPDYISPEILQAMEDGM 255
Query: 234 GLCNEKTDVFCFGMLLLELLTG 255
G + D + G+ + E+L G
Sbjct: 256 GKYGPECDWWSLGVCMYEMLYG 277
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 28.9 bits (63), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 6/82 (7%)
Query: 179 VFKDIKLSQILFDEYNVAKLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILT----- 233
V +DIK +L D +L+DF + + T V S + T Y++PE +
Sbjct: 213 VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGT-VQSSVAVGTPDYISPEILQAMEDGM 271
Query: 234 GLCNEKTDVFCFGMLLLELLTG 255
G + D + G+ + E+L G
Sbjct: 272 GKYGPECDWWSLGVCMYEMLYG 293
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 28.5 bits (62), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 67/167 (40%), Gaps = 26/167 (15%)
Query: 107 NHRNILKLIGCCIE----TEIPILVFEFVEYGTLADRI--CSPHGPHL--EPLLWRHRLK 158
NH NIL+L+ C+ L+ F + GTL + I G L + +LW
Sbjct: 84 NHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILW----- 138
Query: 159 IAMEIGNAMAYIHIGFRRPIVFKDIKLSQILFDEYNVAKLSDFSESEYI---PEGETHVT 215
+ + I + IH + +D+K + IL + L D EG
Sbjct: 139 LLLGICRGLEAIHA---KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQAL 195
Query: 216 SHMLTRTKR----YLAPE-YILTGLC--NEKTDVFCFGMLLLELLTG 255
+ +R Y APE + + C +E+TDV+ G +L ++ G
Sbjct: 196 TLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFG 242
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 28.5 bits (62), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 9/88 (10%)
Query: 178 IVFKDIKLSQILFDEYNVAKLSDFSESEYIPEG------ETHVTSHML--TRTKRYLAPE 229
++ +D+K S +L + K+ DF + I E T S M+ T+ Y APE
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPE 192
Query: 230 YILTGL-CNEKTDVFCFGMLLLELLTGR 256
+LT + DV+ G +L EL R
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 28.5 bits (62), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 11/89 (12%)
Query: 178 IVFKDIKLSQILFDEYNVAKLSDFSESEYI---------PEGETHVTSHMLTRTKRYLAP 228
++ +D+K S +L + K+ DF + I P G+ + + T+ Y AP
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVA-TRWYRAP 191
Query: 229 EYILTGLCNEKT-DVFCFGMLLLELLTGR 256
E +LT + DV+ G +L EL R
Sbjct: 192 EVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 28.1 bits (61), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 51/127 (40%), Gaps = 27/127 (21%)
Query: 148 LEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILF---------------DE 192
+P H +A ++ +A+ ++H + D+K ILF +E
Sbjct: 117 FQPYPLPHVRHMAYQLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYNEHKSCEE 173
Query: 193 YNVA----KLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGML 248
+V +++DF + + E T + + T+ Y PE IL + DV+ G +
Sbjct: 174 KSVKNTSIRVADFGSATFDHEHHTTIVA-----TRHYRPPEVILELGWAQPCDVWSIGCI 228
Query: 249 LLELLTG 255
L E G
Sbjct: 229 LFEYYRG 235
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 28.1 bits (61), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 51/127 (40%), Gaps = 27/127 (21%)
Query: 148 LEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILF---------------DE 192
+P H +A ++ +A+ ++H + D+K ILF +E
Sbjct: 126 FQPYPLPHVRHMAYQLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYNEHKSCEE 182
Query: 193 YNVA----KLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGML 248
+V +++DF + + E T + + T+ Y PE IL + DV+ G +
Sbjct: 183 KSVKNTSIRVADFGSATFDHEHHTTIVA-----TRHYRPPEVILELGWAQPCDVWSIGCI 237
Query: 249 LLELLTG 255
L E G
Sbjct: 238 LFEYYRG 244
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 28.1 bits (61), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 51/127 (40%), Gaps = 27/127 (21%)
Query: 148 LEPLLWRHRLKIAMEIGNAMAYIHIGFRRPIVFKDIKLSQILF---------------DE 192
+P H +A ++ +A+ ++H + D+K ILF +E
Sbjct: 149 FQPYPLPHVRHMAYQLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYNEHKSCEE 205
Query: 193 YNVA----KLSDFSESEYIPEGETHVTSHMLTRTKRYLAPEYILTGLCNEKTDVFCFGML 248
+V +++DF + + E T + + T+ Y PE IL + DV+ G +
Sbjct: 206 KSVKNTSIRVADFGSATFDHEHHTTIVA-----TRHYRPPEVILELGWAQPCDVWSIGCI 260
Query: 249 LLELLTG 255
L E G
Sbjct: 261 LFEYYRG 267
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 27.7 bits (60), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 64/153 (41%), Gaps = 14/153 (9%)
Query: 107 NHRNILKLIGCCIETEIPILVFEFVEYGTLADRICSPHGPHLEPLLWRHRLKIAMEIGNA 166
H NI+ L + + +V E + G L D+I + R + I
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELXKGGELLDKIL-----RQKFFSEREASAVLFTITKT 128
Query: 167 MAYIHIGFRRPIVFKDIKLSQILF-DEYN---VAKLSDFSESEYIPEGETHVTSHMLTRT 222
+ Y+H + +V +D+K S IL+ DE ++ DF ++ + + + T
Sbjct: 129 VEYLHA---QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYT-- 183
Query: 223 KRYLAPEYILTGLCNEKTDVFCFGMLLLELLTG 255
++APE + + D++ G+LL LTG
Sbjct: 184 ANFVAPEVLERQGYDAACDIWSLGVLLYTXLTG 216
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.140 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,698,930
Number of Sequences: 62578
Number of extensions: 399515
Number of successful extensions: 2252
Number of sequences better than 100.0: 863
Number of HSP's better than 100.0 without gapping: 359
Number of HSP's successfully gapped in prelim test: 504
Number of HSP's that attempted gapping in prelim test: 1266
Number of HSP's gapped (non-prelim): 904
length of query: 331
length of database: 14,973,337
effective HSP length: 99
effective length of query: 232
effective length of database: 8,778,115
effective search space: 2036522680
effective search space used: 2036522680
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.6 bits)