Query 020079
Match_columns 331
No_of_seqs 272 out of 2357
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 11:28:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020079.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020079hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dc8_A Dihydropyrimidinase; TI 100.0 9.9E-38 3.4E-42 298.3 27.7 267 54-323 2-269 (490)
2 3sfw_A Dihydropyrimidinase; hy 100.0 1.3E-36 4.3E-41 289.3 28.1 269 54-323 2-272 (461)
3 2fty_A Dihydropyrimidinase; al 100.0 9.7E-35 3.3E-39 281.8 28.0 269 53-322 3-286 (559)
4 3e74_A Allantoinase; (beta/alp 100.0 2E-34 6.7E-39 274.7 26.7 264 51-322 21-294 (473)
5 2ftw_A Dihydropyrimidine amido 100.0 5E-34 1.7E-38 275.2 28.5 271 53-323 8-280 (521)
6 1gkp_A Hydantoinase; hydrolase 100.0 1E-33 3.5E-38 268.6 27.1 266 55-321 2-269 (458)
7 3hm7_A Allantoinase; metallo-d 100.0 1.6E-33 5.4E-38 267.0 26.4 265 51-322 4-276 (448)
8 2vr2_A Dihydropyrimidinase; hy 100.0 3.8E-33 1.3E-37 270.2 28.2 271 52-322 26-302 (541)
9 2vm8_A Dihydropyrimidinase-rel 100.0 1.8E-32 6.3E-37 263.2 28.3 269 53-321 26-296 (501)
10 1gkr_A Hydantoinase, non-ATP d 100.0 2.7E-31 9.3E-36 251.9 26.6 263 53-321 2-270 (458)
11 3gri_A Dihydroorotase, dhoase; 100.0 2.1E-32 7.1E-37 257.5 18.5 258 55-322 2-262 (424)
12 1nfg_A D-hydantoinase; TIM bar 100.0 2.8E-31 9.6E-36 251.9 25.7 266 54-322 2-269 (457)
13 3mpg_A Dihydroorotase, dhoase; 100.0 2.7E-31 9.2E-36 250.2 17.6 258 54-322 2-263 (428)
14 2z00_A Dihydroorotase; zinc bi 100.0 1.2E-28 4E-33 231.6 17.5 250 55-322 2-265 (426)
15 1xrt_A Dihydroorotase, dhoase; 100.0 6E-28 2E-32 229.8 22.2 258 52-321 46-308 (467)
16 3gip_A N-acyl-D-glutamate deac 100.0 3E-27 1E-31 225.7 22.3 239 51-323 5-290 (480)
17 2gwn_A Dihydroorotase; zinc-bi 99.9 8.6E-27 2.9E-31 221.0 19.9 259 53-322 4-275 (452)
18 3gnh_A L-lysine, L-arginine ca 99.9 1.9E-24 6.4E-29 201.4 19.2 244 54-315 3-318 (403)
19 3h4u_A Amidohydrolase; signatu 99.9 8.3E-24 2.8E-28 201.7 23.9 258 51-315 27-347 (479)
20 3feq_A Putative amidohydrolase 99.9 2.6E-24 8.8E-29 201.7 19.5 249 52-315 3-323 (423)
21 4f0r_A 5-methylthioadenosine/S 99.9 2.5E-24 8.5E-29 203.5 19.3 255 50-315 3-307 (447)
22 3lnp_A Amidohydrolase family p 99.9 1.2E-23 4.2E-28 199.9 23.3 254 51-315 21-334 (468)
23 4dyk_A Amidohydrolase; adenosi 99.9 7.1E-24 2.4E-28 200.6 19.8 254 51-315 6-309 (451)
24 2r8c_A Putative amidohydrolase 99.9 1.5E-23 5.1E-28 197.0 20.2 220 53-311 4-274 (426)
25 4dzh_A Amidohydrolase; adenosi 99.9 6.4E-24 2.2E-28 202.3 17.5 253 52-315 13-316 (472)
26 3ls9_A Triazine hydrolase; atr 99.9 5.3E-23 1.8E-27 194.7 22.7 253 55-315 2-325 (456)
27 2paj_A Putative cytosine/guani 99.9 5.6E-23 1.9E-27 196.6 20.0 253 52-315 9-336 (492)
28 1ra0_A Cytosine deaminase; alp 99.9 4.6E-23 1.6E-27 193.9 16.2 179 52-236 7-220 (430)
29 2qt3_A N-isopropylammelide iso 99.9 5.7E-22 2E-26 184.6 23.5 257 52-315 4-303 (403)
30 4aql_A Guanine deaminase; hydr 99.9 8.5E-23 2.9E-27 194.7 17.6 267 53-326 31-363 (476)
31 1rk6_A D-aminoacylase; TIM bar 99.9 3.3E-22 1.1E-26 191.6 21.5 232 53-321 21-302 (496)
32 2i9u_A Cytosine/guanine deamin 99.9 2.5E-22 8.6E-27 189.4 20.2 191 52-242 8-238 (439)
33 1e9y_B Urease subunit beta; hy 99.9 8.5E-23 2.9E-27 197.5 16.9 208 52-308 65-295 (569)
34 2ood_A BLR3880 protein; PSI-II 99.9 1.5E-22 5.1E-27 193.0 18.0 254 54-314 4-325 (475)
35 3be7_A Zn-dependent arginine c 99.9 2.5E-21 8.5E-26 180.7 23.5 218 51-311 4-265 (408)
36 2qs8_A XAA-Pro dipeptidase; am 99.9 6.7E-21 2.3E-25 178.4 23.8 184 52-239 6-240 (418)
37 2ics_A Adenine deaminase; TIM 99.9 2.7E-22 9.2E-27 185.3 13.7 177 52-237 4-191 (379)
38 3v7p_A Amidohydrolase family p 99.9 1.6E-21 5.3E-26 183.5 17.3 185 55-245 2-218 (427)
39 2imr_A Hypothetical protein DR 99.9 1.4E-21 4.8E-26 183.3 16.8 186 51-242 35-249 (420)
40 3pnu_A Dihydroorotase; TIM bar 99.9 4.2E-22 1.4E-26 181.8 11.9 185 99-323 22-218 (359)
41 2p9b_A Possible prolidase; pro 99.9 1.5E-20 5.2E-25 178.2 22.5 184 53-239 13-251 (458)
42 2vun_A Enamidase; nicotinate d 99.9 1.9E-20 6.6E-25 173.4 22.4 244 53-315 2-276 (386)
43 2ogj_A Dihydroorotase; TIM bar 99.9 3.1E-22 1.1E-26 187.6 9.9 257 51-315 13-291 (417)
44 4ubp_C Protein (urease (chain 99.9 3.6E-21 1.2E-25 184.1 17.0 170 52-240 66-255 (570)
45 4ac7_C Urease subunit alpha; h 99.9 3.6E-21 1.2E-25 184.1 17.0 170 52-240 66-255 (570)
46 4f0l_A Amidohydrolase; ssgcid, 99.8 5.2E-21 1.8E-25 181.4 11.7 251 52-316 11-330 (458)
47 3nqb_A Adenine deaminase 2; PS 99.8 4.1E-20 1.4E-24 180.4 17.6 244 51-315 33-292 (608)
48 2z26_A Dihydroorotase, dhoase; 99.8 7.2E-21 2.5E-25 174.0 10.4 192 99-322 4-206 (347)
49 3mdu_A N-formimino-L-glutamate 99.8 5E-20 1.7E-24 174.4 13.7 245 57-316 4-321 (453)
50 2vhl_A N-acetylglucosamine-6-p 99.8 3.8E-19 1.3E-23 165.3 18.5 192 52-254 2-219 (396)
51 4gy7_A Urease; JACK bean, hydr 99.8 3.5E-19 1.2E-23 178.2 18.2 171 52-241 336-526 (840)
52 2q09_A Imidazolonepropionase; 99.8 9.9E-19 3.4E-23 163.6 20.1 248 53-315 5-317 (416)
53 2puz_A Imidazolonepropionase; 99.8 1.7E-18 5.7E-23 162.1 19.7 262 52-328 14-344 (419)
54 1p1m_A Hypothetical protein TM 99.8 1.5E-18 5E-23 161.9 19.1 180 55-243 1-210 (406)
55 3hpa_A Amidohydrolase; signatu 99.8 9.3E-18 3.2E-22 158.6 24.0 257 52-315 28-347 (479)
56 1yrr_A N-acetylglucosamine-6-p 99.8 2.3E-18 8E-23 159.3 16.5 180 55-244 2-206 (382)
57 1onw_A Isoaspartyl dipeptidase 99.8 1.5E-17 5E-22 154.3 20.2 249 53-309 8-276 (390)
58 2bb0_A Imidazolonepropionase; 99.8 2E-17 6.9E-22 154.9 21.1 248 53-315 5-324 (421)
59 3ooq_A Amidohydrolase; structu 99.8 1.9E-18 6.6E-23 160.7 12.8 95 52-147 4-120 (396)
60 3icj_A Uncharacterized metal-d 99.8 2.6E-18 8.9E-23 165.2 13.9 63 54-116 37-106 (534)
61 3iv8_A N-acetylglucosamine-6-p 99.7 1.9E-16 6.6E-21 145.3 15.1 108 55-162 5-116 (381)
62 4ep8_C Urease subunit alpha; a 99.6 4.2E-15 1.4E-19 144.5 18.2 170 51-239 63-250 (566)
63 3mtw_A L-arginine carboxypepti 99.6 2.1E-14 7.2E-19 130.4 20.2 184 55-241 4-233 (403)
64 3ggm_A Uncharacterized protein 99.6 7.4E-16 2.5E-20 110.1 8.1 65 53-117 4-73 (81)
65 3mkv_A Putative amidohydrolase 99.6 3.8E-15 1.3E-19 136.0 8.1 66 52-117 3-71 (426)
66 1o12_A N-acetylglucosamine-6-p 99.5 5E-14 1.7E-18 130.0 8.5 70 68-148 27-96 (376)
67 1bf6_A Phosphotriesterase homo 98.8 4.3E-08 1.5E-12 86.6 12.4 131 106-237 6-160 (291)
68 2ob3_A Parathion hydrolase; me 98.7 1.4E-07 4.7E-12 85.1 12.1 175 106-314 16-220 (330)
69 2vc7_A Aryldialkylphosphatase; 98.7 7.1E-08 2.4E-12 86.3 9.3 148 106-254 17-191 (314)
70 1zzm_A Putative deoxyribonucle 98.6 1.1E-06 3.6E-11 76.3 15.9 125 107-237 5-136 (259)
71 3rcm_A TATD family hydrolase; 98.5 5.4E-06 1.8E-10 73.0 15.7 125 107-237 3-136 (287)
72 1xwy_A DNAse TATD, deoxyribonu 98.4 9.2E-06 3.2E-10 70.5 16.2 125 107-237 5-134 (264)
73 2y1h_A Putative deoxyribonucle 98.4 1.7E-05 5.8E-10 69.2 17.3 126 106-237 5-148 (272)
74 3ipw_A Hydrolase TATD family p 98.3 1.3E-05 4.4E-10 71.6 13.2 130 106-237 27-177 (325)
75 4i6k_A Amidohydrolase family p 98.2 1.3E-05 4.4E-10 70.9 12.9 127 103-237 23-159 (294)
76 3gg7_A Uncharacterized metallo 98.1 4.4E-06 1.5E-10 72.2 7.0 119 107-237 3-127 (254)
77 3guw_A Uncharacterized protein 98.1 8.1E-05 2.8E-09 64.5 14.1 164 107-316 2-182 (261)
78 1yix_A Deoxyribonuclease YCFH; 98.0 7E-05 2.4E-09 64.8 12.3 126 107-236 3-132 (265)
79 1j6o_A TATD-related deoxyribon 98.0 2.9E-05 1E-09 67.6 9.7 125 106-236 12-141 (268)
80 2xio_A Putative deoxyribonucle 97.9 1E-05 3.5E-10 71.8 5.9 130 106-237 2-149 (301)
81 3tn4_A Phosphotriesterase; lac 97.9 0.0002 6.8E-09 64.9 13.7 203 106-315 52-300 (360)
82 3pnz_A Phosphotriesterase fami 97.9 0.00012 4.2E-09 65.6 11.7 202 106-315 17-272 (330)
83 3cjp_A Predicted amidohydrolas 97.8 0.00031 1.1E-08 61.0 14.0 51 183-237 102-153 (272)
84 3ovg_A Amidohydrolase; structu 97.8 0.00033 1.1E-08 63.5 14.5 147 106-254 21-208 (363)
85 2ffi_A 2-pyrone-4,6-dicarboxyl 97.8 5.2E-05 1.8E-09 66.5 7.4 125 106-237 13-146 (288)
86 2gzx_A Putative TATD related D 97.7 0.00034 1.2E-08 60.4 12.4 125 107-237 2-131 (265)
87 3k2g_A Resiniferatoxin-binding 97.7 0.0004 1.4E-08 63.1 13.2 109 127-236 88-211 (364)
88 3gtx_A Organophosphorus hydrol 97.7 0.0003 1E-08 63.3 12.1 148 106-254 32-212 (339)
89 4d9a_A 2-pyrone-4,6-dicarbaxyl 97.7 0.00027 9.2E-09 62.7 11.3 127 103-237 23-159 (303)
90 3rhg_A Putative phophotriester 97.6 0.0011 3.8E-08 60.2 14.0 22 214-235 178-200 (365)
91 2dvt_A Thermophilic reversible 97.6 0.00011 3.9E-09 65.5 7.1 55 183-237 108-167 (327)
92 3rys_A Adenosine deaminase 1; 97.5 0.0014 4.6E-08 59.1 13.3 122 196-328 164-293 (343)
93 3pao_A Adenosine deaminase; st 97.5 0.00021 7.1E-09 64.0 7.1 123 196-328 161-290 (326)
94 2pgf_A Adenosine deaminase; me 97.5 0.00023 7.7E-09 65.0 7.5 108 214-328 214-331 (371)
95 4do7_A Amidohydrolase 2; enzym 97.2 0.00082 2.8E-08 59.4 8.0 100 184-317 90-205 (303)
96 2f6k_A Metal-dependent hydrola 97.2 0.0008 2.8E-08 59.3 7.7 55 182-237 103-157 (307)
97 3e2v_A 3'-5'-exonuclease; stru 97.1 0.0027 9.1E-08 58.0 10.3 42 105-146 12-59 (401)
98 3iar_A Adenosine deaminase; pu 97.0 0.011 3.8E-07 53.5 13.5 94 215-315 192-292 (367)
99 4gxw_A Adenosine deaminase; am 97.0 0.0082 2.8E-07 54.7 12.7 109 212-327 194-313 (380)
100 3qy7_A Tyrosine-protein phosph 96.1 0.026 8.9E-07 48.6 9.3 37 107-143 1-38 (262)
101 3irs_A Uncharacterized protein 96.0 0.025 8.6E-07 49.5 8.8 55 182-237 105-160 (291)
102 2wje_A CPS4B, tyrosine-protein 95.9 0.069 2.4E-06 45.4 10.9 39 105-143 3-42 (247)
103 2wm1_A 2-amino-3-carboxymucona 95.6 0.039 1.3E-06 49.2 8.7 55 182-237 123-177 (336)
104 2hbv_A 2-amino-3-carboxymucona 95.5 0.069 2.4E-06 47.5 9.6 54 182-237 127-180 (334)
105 2yxo_A Histidinol phosphatase; 95.2 0.82 2.8E-05 38.8 15.5 52 272-323 174-232 (267)
106 3ij6_A Uncharacterized metal-d 94.9 0.022 7.4E-07 50.5 4.3 55 182-237 110-164 (312)
107 3p6l_A Sugar phosphate isomera 94.4 0.25 8.4E-06 42.0 9.9 96 194-317 33-138 (262)
108 3lmz_A Putative sugar isomeras 94.4 0.35 1.2E-05 41.0 10.7 40 194-234 41-80 (257)
109 3aam_A Endonuclease IV, endoiv 94.0 1.5 5.2E-05 37.2 14.2 108 190-316 21-142 (270)
110 3nur_A Amidohydrolase; TIM bar 94.0 0.27 9.3E-06 44.2 9.7 56 182-238 141-196 (357)
111 1m65_A Hypothetical protein YC 92.6 0.46 1.6E-05 39.9 8.4 34 107-143 3-36 (245)
112 3tva_A Xylose isomerase domain 90.2 5 0.00017 34.2 12.8 40 194-235 32-71 (290)
113 1aj0_A DHPS, dihydropteroate s 90.0 2.1 7.1E-05 37.0 9.8 119 182-313 38-185 (282)
114 2q02_A Putative cytoplasmic pr 89.6 3.6 0.00012 34.6 11.2 21 270-290 120-140 (272)
115 2w9m_A Polymerase X; SAXS, DNA 89.3 2.6 8.9E-05 40.4 10.9 49 274-323 474-524 (578)
116 1eye_A DHPS 1, dihydropteroate 88.8 6.8 0.00023 33.7 12.2 121 182-314 29-178 (280)
117 3lgd_A Adenosine deaminase CEC 87.9 0.71 2.4E-05 43.5 5.8 95 213-315 307-415 (508)
118 2gwg_A 4-oxalomesaconate hydra 87.5 1.7 6E-05 38.5 8.0 57 182-238 122-182 (350)
119 3vni_A Xylose isomerase domain 87.1 11 0.00037 32.1 12.8 45 189-235 23-68 (294)
120 1tx2_A DHPS, dihydropteroate s 86.3 12 0.0004 32.5 12.2 120 183-314 64-205 (297)
121 3dcp_A Histidinol-phosphatase; 86.0 16 0.00054 31.4 15.2 54 270-323 205-266 (283)
122 1qtw_A Endonuclease IV; DNA re 85.9 8.4 0.00029 32.5 11.4 110 190-317 19-149 (285)
123 2qul_A D-tagatose 3-epimerase; 85.9 14 0.00049 31.1 12.9 44 190-235 24-67 (290)
124 2hk0_A D-psicose 3-epimerase; 85.6 13 0.00046 31.8 12.7 46 187-235 41-86 (309)
125 2isw_A Putative fructose-1,6-b 85.5 4.3 0.00015 35.6 9.1 50 185-237 155-213 (323)
126 2x7v_A Probable endonuclease 4 84.9 12 0.00043 31.4 12.0 111 188-317 18-148 (287)
127 1f6y_A 5-methyltetrahydrofolat 83.6 7.8 0.00027 32.9 9.8 122 183-315 26-162 (262)
128 2nx9_A Oxaloacetate decarboxyl 83.1 16 0.00054 33.9 12.3 123 128-254 103-228 (464)
129 3cqj_A L-ribulose-5-phosphate 82.5 22 0.00074 30.2 14.7 45 189-233 36-84 (295)
130 3iar_A Adenosine deaminase; pu 82.5 10 0.00035 33.9 10.6 40 282-324 228-268 (367)
131 3kws_A Putative sugar isomeras 82.2 11 0.00036 32.0 10.4 33 194-232 49-81 (287)
132 2yci_X 5-methyltetrahydrofolat 81.7 22 0.00074 30.3 11.9 123 182-315 34-171 (271)
133 3b0x_A DNA polymerase beta fam 81.6 8.1 0.00028 36.9 10.2 33 107-143 338-370 (575)
134 1q7z_A 5-methyltetrahydrofolat 81.5 16 0.00056 34.8 12.1 122 184-316 342-476 (566)
135 2wqp_A Polysialic acid capsule 81.3 25 0.00085 31.2 12.4 97 212-311 88-211 (349)
136 3qxb_A Putative xylose isomera 80.8 26 0.0009 30.1 13.8 46 188-234 40-89 (316)
137 1i60_A IOLI protein; beta barr 80.6 4 0.00014 34.4 7.0 87 184-291 47-144 (278)
138 3aal_A Probable endonuclease 4 80.5 7.7 0.00026 33.3 8.9 88 186-292 22-116 (303)
139 1xla_A D-xylose isomerase; iso 80.4 17 0.00058 32.7 11.5 118 187-317 38-184 (394)
140 3dx5_A Uncharacterized protein 78.9 14 0.0005 31.1 10.1 22 270-291 123-144 (286)
141 2zds_A Putative DNA-binding pr 78.8 19 0.00065 31.2 11.1 44 190-233 22-69 (340)
142 2h9a_B CO dehydrogenase/acetyl 78.6 33 0.0011 29.9 13.5 126 184-315 76-209 (310)
143 4inf_A Metal-dependent hydrola 77.7 1.9 6.5E-05 38.9 4.1 56 182-238 159-214 (373)
144 2a3l_A AMP deaminase, AMPD; at 77.6 0.43 1.5E-05 46.7 -0.2 102 219-329 502-615 (701)
145 3n9r_A Fructose-bisphosphate a 76.7 13 0.00043 32.4 8.8 50 185-237 157-213 (307)
146 1rqb_A Transcarboxylase 5S sub 75.9 37 0.0013 32.0 12.5 124 127-254 119-247 (539)
147 3qc0_A Sugar isomerase; TIM ba 75.5 11 0.00037 31.5 8.3 20 270-289 123-142 (275)
148 3q94_A Fructose-bisphosphate a 75.3 26 0.00089 30.1 10.4 65 185-253 161-230 (288)
149 3m5v_A DHDPS, dihydrodipicolin 74.4 22 0.00076 30.7 10.0 98 194-293 39-144 (301)
150 3obe_A Sugar phosphate isomera 74.3 41 0.0014 28.8 11.9 112 188-317 41-173 (305)
151 1qwg_A PSL synthase;, (2R)-pho 73.0 41 0.0014 28.2 12.2 36 195-232 37-72 (251)
152 1gvf_A Tagatose-bisphosphate a 72.9 25 0.00087 30.2 9.8 65 185-253 157-226 (286)
153 3flu_A DHDPS, dihydrodipicolin 72.6 33 0.0011 29.6 10.6 97 194-292 39-142 (297)
154 2y5s_A DHPS, dihydropteroate s 71.5 31 0.0011 29.8 10.0 119 182-313 46-193 (294)
155 3cny_A Inositol catabolism pro 70.8 42 0.0014 28.3 11.0 20 271-290 142-161 (301)
156 1bxb_A Xylose isomerase; xylos 70.4 59 0.002 29.0 13.0 115 190-316 40-183 (387)
157 3tak_A DHDPS, dihydrodipicolin 70.2 37 0.0012 29.1 10.4 97 194-292 33-136 (291)
158 1k77_A EC1530, hypothetical pr 70.1 44 0.0015 27.4 10.9 35 194-235 26-61 (260)
159 3qze_A DHDPS, dihydrodipicolin 70.0 39 0.0013 29.3 10.6 97 194-292 55-158 (314)
160 3l21_A DHDPS, dihydrodipicolin 70.0 29 0.001 30.0 9.7 97 194-292 47-150 (304)
161 3daq_A DHDPS, dihydrodipicolin 69.5 35 0.0012 29.2 10.1 110 194-305 34-154 (292)
162 4dzi_A Putative TIM-barrel met 69.1 4.3 0.00015 37.2 4.3 57 181-238 174-234 (423)
163 3cpr_A Dihydrodipicolinate syn 68.7 52 0.0018 28.4 11.1 98 194-293 48-152 (304)
164 1xim_A D-xylose isomerase; iso 67.8 57 0.0019 29.1 11.6 118 187-317 38-184 (393)
165 3mcm_A 2-amino-4-hydroxy-6-hyd 67.8 62 0.0021 29.6 11.6 122 181-313 211-366 (442)
166 3l21_A DHDPS, dihydrodipicolin 67.5 60 0.0021 28.0 11.3 109 120-234 31-147 (304)
167 3ngf_A AP endonuclease, family 67.4 33 0.0011 28.6 9.4 41 188-235 28-69 (269)
168 3flu_A DHDPS, dihydrodipicolin 67.4 60 0.002 27.9 12.4 110 120-235 23-140 (297)
169 1vli_A Spore coat polysacchari 67.3 32 0.0011 30.9 9.5 32 212-243 98-129 (385)
170 3na8_A Putative dihydrodipicol 67.2 63 0.0021 28.0 11.4 110 120-235 40-157 (315)
171 2bdq_A Copper homeostasis prot 67.1 30 0.001 28.5 8.5 65 186-254 80-148 (224)
172 3na8_A Putative dihydrodipicol 66.7 36 0.0012 29.6 9.7 108 194-303 56-174 (315)
173 3tak_A DHDPS, dihydrodipicolin 66.5 61 0.0021 27.7 11.7 110 120-235 17-134 (291)
174 3si9_A DHDPS, dihydrodipicolin 66.5 65 0.0022 28.0 12.6 110 120-235 38-155 (315)
175 2ehh_A DHDPS, dihydrodipicolin 66.2 47 0.0016 28.5 10.3 97 194-292 32-135 (294)
176 2yxg_A DHDPS, dihydrodipicolin 65.6 52 0.0018 28.1 10.4 102 188-292 27-135 (289)
177 2vp8_A Dihydropteroate synthas 65.5 45 0.0015 29.1 9.9 120 182-314 65-218 (318)
178 3eb2_A Putative dihydrodipicol 65.4 66 0.0022 27.7 11.2 110 120-235 20-137 (300)
179 3si9_A DHDPS, dihydrodipicolin 65.2 41 0.0014 29.3 9.7 116 194-311 54-180 (315)
180 3qze_A DHDPS, dihydrodipicolin 65.1 69 0.0024 27.8 11.3 110 120-235 39-156 (314)
181 1xky_A Dihydrodipicolinate syn 65.1 53 0.0018 28.3 10.4 97 194-292 44-147 (301)
182 3m5v_A DHDPS, dihydrodipicolin 65.0 67 0.0023 27.6 11.8 108 122-235 25-141 (301)
183 1muw_A Xylose isomerase; atomi 64.8 76 0.0026 28.2 11.8 48 186-234 37-88 (386)
184 2ftp_A Hydroxymethylglutaryl-C 64.5 68 0.0023 27.5 12.0 70 183-255 159-231 (302)
185 2hmc_A AGR_L_411P, dihydrodipi 64.4 60 0.002 28.6 10.7 98 194-292 58-160 (344)
186 1vr6_A Phospho-2-dehydro-3-deo 64.0 78 0.0027 28.0 12.9 63 182-244 119-186 (350)
187 3fkr_A L-2-keto-3-deoxyarabona 63.5 58 0.002 28.2 10.3 115 194-310 40-167 (309)
188 1f6k_A N-acetylneuraminate lya 63.3 55 0.0019 28.0 10.1 102 188-292 30-139 (293)
189 1n7k_A Deoxyribose-phosphate a 63.3 64 0.0022 26.7 10.8 127 120-253 31-162 (234)
190 2wkj_A N-acetylneuraminate lya 62.6 60 0.002 28.0 10.2 97 194-292 43-147 (303)
191 3tr9_A Dihydropteroate synthas 62.1 80 0.0027 27.5 10.9 120 182-314 49-200 (314)
192 3b4u_A Dihydrodipicolinate syn 62.1 57 0.002 27.9 10.0 104 185-292 26-142 (294)
193 2r8w_A AGR_C_1641P; APC7498, d 62.0 56 0.0019 28.6 10.1 99 189-292 62-169 (332)
194 2cw6_A Hydroxymethylglutaryl-C 61.6 72 0.0025 27.3 10.6 70 182-254 155-227 (298)
195 2r8w_A AGR_C_1641P; APC7498, d 61.5 81 0.0028 27.6 11.0 109 120-235 50-167 (332)
196 2yxg_A DHDPS, dihydrodipicolin 61.3 77 0.0026 27.0 11.5 108 122-235 18-133 (289)
197 3h5d_A DHDPS, dihydrodipicolin 61.3 70 0.0024 27.7 10.5 100 188-292 34-143 (311)
198 2vc6_A MOSA, dihydrodipicolina 61.2 44 0.0015 28.6 9.1 97 194-292 32-135 (292)
199 1o5k_A DHDPS, dihydrodipicolin 61.2 57 0.002 28.1 9.9 97 194-292 44-147 (306)
200 2dqw_A Dihydropteroate synthas 61.2 44 0.0015 28.8 9.0 119 182-313 52-197 (294)
201 1ydn_A Hydroxymethylglutaryl-C 61.1 77 0.0026 27.0 11.2 176 122-310 23-227 (295)
202 3qfe_A Putative dihydrodipicol 61.1 82 0.0028 27.3 12.7 117 194-311 43-172 (318)
203 3dz1_A Dihydrodipicolinate syn 61.1 82 0.0028 27.2 12.1 115 194-310 40-165 (313)
204 1xky_A Dihydrodipicolinate syn 60.9 80 0.0027 27.1 12.1 108 121-235 29-145 (301)
205 2v9d_A YAGE; dihydrodipicolini 60.9 87 0.003 27.5 11.6 109 120-235 47-164 (343)
206 3e96_A Dihydrodipicolinate syn 60.6 69 0.0024 27.8 10.3 109 120-235 28-144 (316)
207 2rfg_A Dihydrodipicolinate syn 60.4 81 0.0028 27.0 10.8 107 122-235 18-133 (297)
208 2v9d_A YAGE; dihydrodipicolini 60.3 61 0.0021 28.5 10.0 97 194-292 63-166 (343)
209 2rfg_A Dihydrodipicolinate syn 60.2 54 0.0019 28.2 9.5 100 189-293 28-136 (297)
210 3fkr_A L-2-keto-3-deoxyarabona 60.1 77 0.0026 27.3 10.5 112 120-235 24-144 (309)
211 3g8r_A Probable spore coat pol 59.7 87 0.003 27.7 10.7 33 212-244 75-107 (350)
212 2vc6_A MOSA, dihydrodipicolina 59.2 84 0.0029 26.8 11.4 108 122-235 18-133 (292)
213 1o5k_A DHDPS, dihydrodipicolin 58.8 80 0.0027 27.2 10.4 107 122-235 30-145 (306)
214 1rvg_A Fructose-1,6-bisphospha 58.6 79 0.0027 27.4 10.0 50 185-237 155-211 (305)
215 3cpr_A Dihydrodipicolinate syn 58.5 89 0.003 26.9 12.5 109 120-234 32-148 (304)
216 3eb2_A Putative dihydrodipicol 58.4 41 0.0014 29.0 8.4 98 194-293 36-140 (300)
217 2ehh_A DHDPS, dihydrodipicolin 58.3 88 0.003 26.7 11.7 107 122-234 18-132 (294)
218 3qfe_A Putative dihydrodipicol 58.3 79 0.0027 27.4 10.3 109 122-234 29-145 (318)
219 3inp_A D-ribulose-phosphate 3- 58.2 81 0.0028 26.3 10.2 97 185-318 43-145 (246)
220 2wkj_A N-acetylneuraminate lya 58.0 91 0.0031 26.8 12.0 109 121-235 28-145 (303)
221 3erp_A Putative oxidoreductase 57.7 98 0.0034 27.1 18.9 167 122-318 61-246 (353)
222 3k13_A 5-methyltetrahydrofolat 57.6 93 0.0032 26.8 10.7 100 183-291 38-141 (300)
223 3e96_A Dihydrodipicolinate syn 57.6 55 0.0019 28.4 9.2 96 194-291 44-145 (316)
224 3s5o_A 4-hydroxy-2-oxoglutarat 57.4 81 0.0028 27.2 10.2 97 194-292 46-151 (307)
225 3d0c_A Dihydrodipicolinate syn 56.9 97 0.0033 26.8 11.0 109 120-235 28-144 (314)
226 2ojp_A DHDPS, dihydrodipicolin 56.7 49 0.0017 28.3 8.6 97 194-292 33-136 (292)
227 1f6k_A N-acetylneuraminate lya 56.6 94 0.0032 26.5 11.6 110 120-235 19-137 (293)
228 3b4u_A Dihydrodipicolinate syn 56.4 95 0.0032 26.5 12.3 109 120-235 19-140 (294)
229 2zvr_A Uncharacterized protein 55.4 83 0.0028 26.3 9.9 44 187-235 45-89 (290)
230 3dz1_A Dihydrodipicolinate syn 54.8 1E+02 0.0036 26.5 11.0 107 120-234 24-140 (313)
231 3n2t_A Putative oxidoreductase 54.4 1.1E+02 0.0038 26.7 12.3 112 122-234 49-174 (348)
232 4e38_A Keto-hydroxyglutarate-a 54.4 71 0.0024 26.4 8.8 110 122-257 43-152 (232)
233 3daq_A DHDPS, dihydrodipicolin 54.1 1E+02 0.0035 26.3 11.6 106 123-234 21-134 (292)
234 2d73_A Alpha-glucosidase SUSB; 54.1 25 0.00084 34.5 6.7 112 123-235 369-508 (738)
235 2ojp_A DHDPS, dihydrodipicolin 53.9 81 0.0028 26.9 9.5 110 120-235 17-134 (292)
236 2r91_A 2-keto-3-deoxy-(6-phosp 53.7 1E+02 0.0035 26.1 10.6 95 194-292 30-131 (286)
237 2g0w_A LMO2234 protein; putati 53.7 30 0.001 29.4 6.8 17 216-232 106-122 (296)
238 3bg3_A Pyruvate carboxylase, m 53.5 1.2E+02 0.004 29.8 11.4 124 128-254 200-332 (718)
239 3kws_A Putative sugar isomeras 53.3 83 0.0028 26.2 9.5 56 215-290 104-166 (287)
240 3s5o_A 4-hydroxy-2-oxoglutarat 53.3 1.1E+02 0.0037 26.3 11.6 112 120-235 30-149 (307)
241 3a5f_A Dihydrodipicolinate syn 53.2 50 0.0017 28.3 8.1 97 194-292 33-136 (291)
242 1ub3_A Aldolase protein; schif 53.1 93 0.0032 25.4 10.4 127 120-253 14-147 (220)
243 1ydo_A HMG-COA lyase; TIM-barr 52.4 93 0.0032 26.8 9.7 69 183-254 157-228 (307)
244 2qw5_A Xylose isomerase-like T 52.1 88 0.003 26.9 9.7 46 187-233 36-86 (335)
245 3ayv_A Putative uncharacterize 51.8 96 0.0033 25.2 12.0 16 274-289 121-136 (254)
246 3u0h_A Xylose isomerase domain 51.7 26 0.00087 29.3 5.9 21 270-290 122-142 (281)
247 3qc0_A Sugar isomerase; TIM ba 51.4 1E+02 0.0034 25.3 10.7 46 192-237 92-145 (275)
248 2yb1_A Amidohydrolase; HET: AM 51.1 11 0.00038 32.4 3.5 33 107-143 3-35 (292)
249 3ctl_A D-allulose-6-phosphate 50.6 1E+02 0.0036 25.3 10.0 93 186-317 17-116 (231)
250 1nvm_A HOA, 4-hydroxy-2-oxoval 50.0 1.3E+02 0.0045 26.3 11.8 105 128-238 96-204 (345)
251 3cqj_A L-ribulose-5-phosphate 50.0 1.1E+02 0.0038 25.5 11.6 17 127-143 32-48 (295)
252 3tva_A Xylose isomerase domain 49.9 1.1E+02 0.0038 25.4 12.9 16 215-230 102-117 (290)
253 2nuw_A 2-keto-3-deoxygluconate 49.8 1.1E+02 0.0038 26.0 9.7 96 194-292 31-132 (288)
254 3iv8_A N-acetylglucosamine-6-p 49.3 49 0.0017 29.6 7.6 51 184-239 79-134 (381)
255 3p6l_A Sugar phosphate isomera 49.2 1.1E+02 0.0037 25.1 9.6 45 184-236 92-136 (262)
256 3dx5_A Uncharacterized protein 48.7 1.2E+02 0.0039 25.2 10.7 20 217-236 125-144 (286)
257 2ki0_A DS119; beta-alpha-beta, 48.5 15 0.00051 19.6 2.4 20 213-232 13-32 (36)
258 4dpp_A DHDPS 2, dihydrodipicol 48.4 78 0.0027 28.1 8.6 54 184-237 81-137 (360)
259 3h5d_A DHDPS, dihydrodipicolin 48.3 1.3E+02 0.0045 25.9 11.8 110 120-235 23-141 (311)
260 3a5f_A Dihydrodipicolinate syn 48.2 85 0.0029 26.8 8.7 108 122-235 19-134 (291)
261 1w3i_A EDA, 2-keto-3-deoxy glu 47.9 1.2E+02 0.0042 25.8 9.7 95 194-292 31-132 (293)
262 3hbl_A Pyruvate carboxylase; T 47.6 2.4E+02 0.0082 29.3 13.2 125 127-254 629-762 (1150)
263 1ydn_A Hydroxymethylglutaryl-C 47.2 1.3E+02 0.0045 25.5 10.0 56 182-240 154-211 (295)
264 3qxb_A Putative xylose isomera 45.2 1.4E+02 0.0048 25.3 10.9 56 215-290 114-179 (316)
265 2nx9_A Oxaloacetate decarboxyl 45.2 1.9E+02 0.0064 26.6 17.9 178 123-311 28-230 (464)
266 3lab_A Putative KDPG (2-keto-3 44.8 79 0.0027 25.9 7.5 111 122-258 22-138 (217)
267 4djd_C C/Fe-SP, corrinoid/iron 44.7 66 0.0023 29.5 7.6 95 213-316 139-235 (446)
268 2d69_A Ribulose bisphosphate c 44.7 1.8E+02 0.0063 26.4 10.6 109 122-236 165-280 (430)
269 3rhg_A Putative phophotriester 44.5 1.7E+02 0.0057 25.9 11.9 12 106-117 18-29 (365)
270 3kdn_A Rubisco, ribulose bisph 43.9 1.8E+02 0.006 26.7 10.3 109 122-236 168-283 (444)
271 2anu_A Hypothetical protein TM 43.7 16 0.00054 30.6 3.2 33 107-143 21-53 (255)
272 1r30_A Biotin synthase; SAM ra 43.1 1.5E+02 0.0053 25.9 10.0 68 184-254 104-171 (369)
273 1gvf_A Tagatose-bisphosphate a 42.0 1.2E+02 0.0042 25.9 8.6 15 298-312 119-133 (286)
274 3elf_A Fructose-bisphosphate a 41.8 1.2E+02 0.0043 26.7 8.7 68 185-253 184-270 (349)
275 1twd_A Copper homeostasis prot 41.5 1.6E+02 0.0054 24.7 13.9 66 186-255 77-144 (256)
276 3d0c_A Dihydrodipicolinate syn 40.7 1.5E+02 0.0052 25.5 9.2 95 194-290 44-144 (314)
277 2ztj_A Homocitrate synthase; ( 40.5 2E+02 0.0067 25.6 10.2 68 183-254 145-216 (382)
278 3noy_A 4-hydroxy-3-methylbut-2 40.1 2E+02 0.0068 25.5 15.5 165 125-324 46-214 (366)
279 3l23_A Sugar phosphate isomera 40.0 1.7E+02 0.0058 24.7 10.7 17 127-143 31-47 (303)
280 3rcm_A TATD family hydrolase; 40.0 1.2E+02 0.0042 25.7 8.4 38 274-313 140-180 (287)
281 1vs1_A 3-deoxy-7-phosphoheptul 39.8 1.7E+02 0.0059 24.7 12.0 58 187-244 56-118 (276)
282 3iix_A Biotin synthetase, puta 39.2 62 0.0021 28.1 6.6 121 183-309 88-223 (348)
283 3vni_A Xylose isomerase domain 37.7 1.7E+02 0.006 24.2 12.7 52 181-233 45-106 (294)
284 3a24_A Alpha-galactosidase; gl 37.6 2.9E+02 0.0098 26.6 11.5 130 122-257 306-449 (641)
285 2ftp_A Hydroxymethylglutaryl-C 37.4 1.9E+02 0.0066 24.6 11.5 120 185-310 86-231 (302)
286 1rpx_A Protein (ribulose-phosp 37.2 1.6E+02 0.0055 23.7 8.7 48 184-235 25-75 (230)
287 3o0f_A Putative metal-dependen 37.1 68 0.0023 27.7 6.3 59 107-171 14-74 (301)
288 3ble_A Citramalate synthase fr 36.2 1.2E+02 0.0042 26.5 7.9 59 194-255 180-241 (337)
289 3lmz_A Putative sugar isomeras 36.1 1.7E+02 0.006 23.7 10.4 102 126-236 31-134 (257)
290 2qt3_A N-isopropylammelide iso 36.0 1.2E+02 0.004 26.6 8.1 38 216-253 228-273 (403)
291 3aam_A Endonuclease IV, endoiv 36.0 1.8E+02 0.0061 23.8 9.4 21 215-235 88-109 (270)
292 2hnh_A DNA polymerase III alph 36.0 60 0.0021 32.8 6.5 37 104-143 3-40 (910)
293 3ovp_A Ribulose-phosphate 3-ep 35.7 1.8E+02 0.0061 23.7 11.2 98 185-318 20-123 (228)
294 3qi7_A Putative transcriptiona 35.0 2.4E+02 0.0081 25.1 9.6 37 281-317 222-258 (371)
295 3u0h_A Xylose isomerase domain 34.5 85 0.0029 25.9 6.5 20 218-237 125-144 (281)
296 4dpp_A DHDPS 2, dihydrodipicol 34.0 2.5E+02 0.0085 24.8 11.3 108 120-234 75-189 (360)
297 1k77_A EC1530, hypothetical pr 33.8 1.6E+02 0.0053 23.9 8.0 23 215-237 124-146 (260)
298 3n6q_A YGHZ aldo-keto reductas 33.6 2.4E+02 0.0081 24.4 18.8 112 123-234 41-166 (346)
299 3b3d_A YTBE protein, putative 33.4 2.3E+02 0.0078 24.2 13.8 109 124-234 64-177 (314)
300 1yx1_A Hypothetical protein PA 33.0 2E+02 0.0068 23.4 11.4 21 215-235 84-105 (264)
301 1tqj_A Ribulose-phosphate 3-ep 32.8 2E+02 0.0068 23.4 10.8 42 278-319 80-124 (230)
302 2zvi_A 2,3-diketo-5-methylthio 32.8 2.8E+02 0.0097 25.1 10.4 107 122-235 166-279 (425)
303 2x5e_A UPF0271 protein PA4511; 32.7 78 0.0027 26.4 5.6 18 298-315 157-174 (252)
304 3pm6_A Putative fructose-bisph 32.2 1.8E+02 0.0061 25.1 8.0 107 181-288 36-149 (306)
305 4i6k_A Amidohydrolase family p 32.0 1.6E+02 0.0055 24.7 8.0 44 272-316 162-213 (294)
306 2dfa_A Hypothetical UPF0271 pr 31.9 2E+02 0.0067 24.0 7.9 24 213-236 41-64 (250)
307 3n9r_A Fructose-bisphosphate a 31.7 2.5E+02 0.0084 24.2 8.9 106 181-288 26-133 (307)
308 1bwv_A Rubisco, protein (ribul 30.8 3.3E+02 0.011 25.2 10.9 108 122-236 189-304 (493)
309 3v0s_A Perakine reductase; AKR 30.7 2.6E+02 0.0089 24.1 13.3 112 123-234 32-154 (337)
310 3fok_A Uncharacterized protein 30.7 75 0.0026 27.5 5.3 123 187-318 133-278 (307)
311 2nuw_A 2-keto-3-deoxygluconate 30.6 2.5E+02 0.0084 23.8 12.1 110 120-235 15-130 (288)
312 2q02_A Putative cytoplasmic pr 30.5 2.2E+02 0.0075 23.1 11.8 45 192-236 94-141 (272)
313 3ipw_A Hydrolase TATD family p 30.4 2.2E+02 0.0074 24.7 8.5 26 288-314 197-222 (325)
314 4f0h_A Ribulose bisphosphate c 29.7 3.4E+02 0.012 25.1 11.4 108 122-236 189-304 (493)
315 1a0c_A Xylose isomerase; ketol 29.3 3.2E+02 0.011 24.7 12.0 42 192-233 89-138 (438)
316 2vef_A Dihydropteroate synthas 29.2 2.5E+02 0.0085 24.2 8.6 97 183-291 34-137 (314)
317 3ayv_A Putative uncharacterize 29.2 1.2E+02 0.004 24.7 6.4 21 215-235 76-97 (254)
318 4af0_A Inosine-5'-monophosphat 29.1 2.9E+02 0.01 26.0 9.4 100 126-234 281-390 (556)
319 4acy_A Endo-alpha-mannosidase; 29.1 98 0.0033 27.7 6.1 45 190-236 110-154 (382)
320 3ktc_A Xylose isomerase; putat 29.0 2.7E+02 0.0092 23.7 11.3 43 186-234 37-80 (333)
321 3l23_A Sugar phosphate isomera 28.9 2.6E+02 0.0089 23.5 12.2 117 186-316 33-168 (303)
322 2r91_A 2-keto-3-deoxy-(6-phosp 28.9 2.6E+02 0.009 23.5 11.2 105 122-235 16-129 (286)
323 2qw5_A Xylose isomerase-like T 28.5 2.7E+02 0.0093 23.6 9.7 52 183-234 65-128 (335)
324 2lci_A Protein OR36; structura 28.4 1.5E+02 0.005 20.5 8.1 69 178-253 32-102 (134)
325 2hk0_A D-psicose 3-epimerase; 28.0 2.7E+02 0.0091 23.3 12.3 51 183-234 66-126 (309)
326 1h1y_A D-ribulose-5-phosphate 27.7 2.4E+02 0.0082 22.7 10.3 47 185-235 22-71 (228)
327 1vp8_A Hypothetical protein AF 27.7 2.3E+02 0.008 22.6 7.3 28 297-324 88-115 (201)
328 1gve_A Aflatoxin B1 aldehyde r 27.7 2.9E+02 0.0098 23.6 13.1 112 123-234 20-137 (327)
329 3nvt_A 3-deoxy-D-arabino-heptu 27.7 3.3E+02 0.011 24.3 10.4 118 183-312 156-282 (385)
330 3ble_A Citramalate synthase fr 27.6 3E+02 0.01 23.8 19.9 176 122-311 38-242 (337)
331 1wdd_A Ribulose bisphosphate c 27.6 3.7E+02 0.013 24.8 10.4 109 122-236 180-296 (477)
332 3rys_A Adenosine deaminase 1; 27.5 1.3E+02 0.0043 26.4 6.5 40 282-324 216-256 (343)
333 1njh_A Protein YOJF; structura 27.4 1.6E+02 0.0056 21.3 5.7 48 55-108 48-101 (119)
334 2qul_A D-tagatose 3-epimerase; 27.2 2.6E+02 0.0089 22.9 9.7 52 183-234 47-107 (290)
335 2qf7_A Pyruvate carboxylase pr 26.9 5.6E+02 0.019 26.6 12.1 124 128-254 648-779 (1165)
336 1rvg_A Fructose-1,6-bisphospha 26.8 1.6E+02 0.0055 25.4 6.8 22 213-234 26-47 (305)
337 2bp1_A Aflatoxin B1 aldehyde r 26.6 3.2E+02 0.011 23.8 13.6 112 123-234 53-170 (360)
338 4djd_D C/Fe-SP, corrinoid/iron 26.4 3.2E+02 0.011 23.7 12.8 116 193-313 91-214 (323)
339 3k2g_A Resiniferatoxin-binding 26.2 3.3E+02 0.011 23.9 12.4 12 106-117 29-40 (364)
340 1w3i_A EDA, 2-keto-3-deoxy glu 26.2 3E+02 0.01 23.3 12.0 110 120-235 15-130 (293)
341 1v6t_A Hypothetical UPF0271 pr 25.9 2E+02 0.007 24.0 7.0 18 298-315 148-165 (255)
342 1qwg_A PSL synthase;, (2R)-pho 25.9 2.9E+02 0.0099 23.0 11.1 43 190-235 92-134 (251)
343 4ad1_A Glycosyl hydrolase fami 25.5 1.4E+02 0.0049 26.6 6.5 53 183-237 104-157 (380)
344 3pm6_A Putative fructose-bisph 25.3 1.4E+02 0.0046 25.9 6.0 24 212-235 35-58 (306)
345 2eja_A URO-D, UPD, uroporphyri 25.2 2.4E+02 0.0081 24.3 7.9 63 186-254 183-254 (338)
346 2pgf_A Adenosine deaminase; me 25.1 3.1E+02 0.01 24.1 8.7 39 282-323 254-293 (371)
347 4dci_A Uncharacterized protein 25.1 51 0.0017 25.3 2.9 16 70-85 134-149 (150)
348 3iv3_A Tagatose 1,6-diphosphat 24.9 1.1E+02 0.0039 26.7 5.6 47 188-235 116-167 (332)
349 2pcq_A Putative dihydrodipicol 24.9 96 0.0033 26.3 5.1 60 194-255 30-91 (283)
350 3vup_A Beta-1,4-mannanase; TIM 24.8 1.9E+02 0.0066 24.0 7.3 46 186-232 46-107 (351)
351 3oa3_A Aldolase; structural ge 24.7 2.2E+02 0.0075 24.3 7.2 24 121-144 70-93 (288)
352 4gie_A Prostaglandin F synthas 24.3 3.2E+02 0.011 23.0 13.4 107 124-234 37-146 (290)
353 3e38_A Two-domain protein cont 24.2 47 0.0016 29.3 3.0 33 107-143 20-52 (343)
354 3civ_A Endo-beta-1,4-mannanase 24.2 2.7E+02 0.0094 24.2 8.1 50 183-233 54-115 (343)
355 2zvr_A Uncharacterized protein 24.1 3E+02 0.01 22.7 9.3 52 184-235 69-133 (290)
356 2hmc_A AGR_L_411P, dihydrodipi 23.5 3.7E+02 0.013 23.4 10.2 108 120-234 42-157 (344)
357 3vnd_A TSA, tryptophan synthas 23.1 3.3E+02 0.011 22.8 14.1 95 184-286 34-151 (267)
358 3mdu_A N-formimino-L-glutamate 23.0 15 0.00051 33.6 -0.5 37 282-321 261-297 (453)
359 3r12_A Deoxyribose-phosphate a 22.4 3.4E+02 0.012 22.7 14.6 109 120-237 54-167 (260)
360 2h9a_A Carbon monoxide dehydro 22.2 2.7E+02 0.0093 25.4 7.8 13 213-225 163-175 (445)
361 1sfl_A 3-dehydroquinate dehydr 22.1 3.2E+02 0.011 22.3 10.7 46 272-317 114-166 (238)
362 4do7_A Amidohydrolase 2; enzym 21.5 3.6E+02 0.012 22.6 9.9 45 270-315 122-167 (303)
363 1vhc_A Putative KHG/KDPG aldol 21.4 3.3E+02 0.011 22.1 9.0 98 122-241 26-123 (224)
364 4hb7_A Dihydropteroate synthas 21.4 3.7E+02 0.013 22.6 11.1 118 182-313 30-170 (270)
365 3ooq_A Amidohydrolase; structu 21.1 3.2E+02 0.011 23.8 8.1 88 219-315 211-306 (396)
366 3cny_A Inositol catabolism pro 21.0 3.5E+02 0.012 22.2 8.1 51 185-235 57-111 (301)
367 4a29_A Engineered retro-aldol 21.0 2.6E+02 0.0089 23.4 6.8 46 194-244 124-169 (258)
368 3vav_A 3-methyl-2-oxobutanoate 20.9 3.8E+02 0.013 22.6 13.0 107 180-310 104-211 (275)
369 3nwr_A A rubisco-like protein; 20.5 4.8E+02 0.016 23.6 9.4 105 122-235 174-285 (432)
No 1
>3dc8_A Dihydropyrimidinase; TIM-barrel, hydrolase; HET: KCX; 1.85A {Sinorhizobium meliloti}
Probab=100.00 E-value=9.9e-38 Score=298.34 Aligned_cols=267 Identities=49% Similarity=0.810 Sum_probs=233.2
Q ss_pred cEEEECcEEEeCCCceeeeEEEeCCEEEEeeCCCCCCCCceEEeCCCCeeecccccccccccCCCCCCCChhhHHHHHHH
Q 020079 54 KILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAA 133 (331)
Q Consensus 54 ~~~i~n~~i~~~~~~~~~~v~i~~g~I~~ig~~~~~~~~~~~id~~g~~v~PG~ID~H~H~~~~~~~~~~~~~~~~~~~~ 133 (331)
+++|+|++|++++...+++|+|+||+|++|++... +.++||++|++|+|||||+|+|+..+..+..++++++.+.+.
T Consensus 2 ~~~i~~~~v~~~~~~~~~~v~I~~G~I~~i~~~~~---~~~viD~~g~~v~PG~ID~H~H~~~~~~~~~~~e~~~~~~~a 78 (490)
T 3dc8_A 2 STVIKGGTIVTADLTYKADVKVEGGRIVEIGPNLS---GAETLDATGCYVMPGGIDPHTHLEMPFMGTYSSDDFESGTRA 78 (490)
T ss_dssp CEEEESCEEECSSCEEECEEEEETTEEEEEESSCC---CSEEEECTTCEEEECEEEEEECTTCEETTEECSCCHHHHHHH
T ss_pred cEEEEccEEECCCCceeeeEEEECCEEEEeccCCC---CCeEEECCCCEEecCEEeeccccCCCCCCCCCHHHHHHHHHH
Confidence 58999999999887788999999999999998643 468999999999999999999998875444688999999999
Q ss_pred HHhCCceEEecCcCCCCC-cHHHHHHHHHHHhccceeeccccccccCCChhhHHHHHHHHHHhCCCeEEEEEecCCCCcC
Q 020079 134 ALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMI 212 (331)
Q Consensus 134 ~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~ 212 (331)
++++||||++|+....+. ...+.++.+.+...+..+++.++.......++.++++.++.++.|+..+|.|+++.+...+
T Consensus 79 a~~~GvTtv~~~~~~~p~~~~~~~~~~~~~~a~~~~~d~~~~~~~~~~~~~~l~el~~l~~~~G~~~~k~~~~~~~~~~~ 158 (490)
T 3dc8_A 79 ALAGGTTMVVDFALPSPGQSLLEALTMWDNKSTRANCDYSFHMAITWWGEQVFNEMETIVKDKGINTFKHFMAYKGALMV 158 (490)
T ss_dssp HHHTTEEEEEEEECCC-CCCHHHHHHHHHHHTTTCSSEEEEEEECCSCSHHHHHHHHHHHHHSCCCEEEEESCSTTTTBC
T ss_pred HHHcCEEeecccCCCCCCcCHHHHHHHHHHHhhcccceeeeEEEEecCcHHHHHHHHHHHHhCCCCEEEEEecCCCCccC
Confidence 999999999998755443 5667777776666566777777776666666667888888756899999999988877788
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHHHhcCCCEEEEeCC
Q 020079 213 NDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVM 292 (331)
Q Consensus 213 ~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~e~~~i~~~~~l~~~~g~~~~i~H~~ 292 (331)
+++.+.++++.|+++|+++.+|+|+.+.+......+...|...+..+...+|+..|..++.+.+.+++..|+++|++|++
T Consensus 159 ~~~~l~~~~~~a~~~g~~v~~HaE~~~~i~~~~~~~~~~g~~~~~~~~~~rP~~~E~~av~r~i~la~~~g~~lhi~HvS 238 (490)
T 3dc8_A 159 DDDEMFSSFQRCAALGALPLVHAENGDVVAQLQAKLLAEGNSGPEAHAYSRPAEVEGEAANRAIMIADMAGCPVYIVHTS 238 (490)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHHHHHHTTCCSHHHHHHTSCHHHHHHHHHHHHHHHHHHTCCEEESSCC
T ss_pred CHHHHHHHHHHHHhcCCEEEEecCChHHHHHHHHHHHhcCCCCccccccCCCHHHHHHHHHHHHHHHHHhCCcEEEEeCC
Confidence 99999999999999999999999998888777777888899999899999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHcCCCEEEecCCccccchh
Q 020079 293 SMDAMEEIAKARKAGPNFLNTTIPLCDSCSN 323 (331)
Q Consensus 293 ~~~~~~~i~~~~~~Gi~v~~~~~p~~~~~~~ 323 (331)
+.++++.++.+|++|++|++++||||+.+..
T Consensus 239 t~~~~~li~~ak~~G~~Vt~e~~ph~l~l~~ 269 (490)
T 3dc8_A 239 CEQAHEAIRRARAKGMRVFGEPLIQHLTLDE 269 (490)
T ss_dssp SHHHHHHHHHHHHTTCCEEECCBHHHHHCCG
T ss_pred CHHHHHHHHHHHHCCCeEEEEEchHHheeCH
Confidence 9999999999999999999999999987753
No 2
>3sfw_A Dihydropyrimidinase; hydrolase, zinc binding; HET: KCX; 1.73A {Brevibacillus agri} PDB: 1yny_A 1k1d_A*
Probab=100.00 E-value=1.3e-36 Score=289.26 Aligned_cols=269 Identities=44% Similarity=0.684 Sum_probs=229.6
Q ss_pred cEEEECcEEEeCCCceeeeEEEeCCEEEEeeCCCCCCCCceEEeCCCCeeecccccccccccCCCCCCCChhhHHHHHHH
Q 020079 54 KILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAA 133 (331)
Q Consensus 54 ~~~i~n~~i~~~~~~~~~~v~i~~g~I~~ig~~~~~~~~~~~id~~g~~v~PG~ID~H~H~~~~~~~~~~~~~~~~~~~~ 133 (331)
+++|+|++|++++...+++|+|+||+|++|++... +++.++||++|++|+|||||+|+|+..++.+...++++....+.
T Consensus 2 ~~~i~n~~v~~~~~~~~~~v~i~~g~I~~i~~~~~-~~~~~viD~~g~~v~PG~ID~H~H~~~~~~~~~~~e~~~~~~~~ 80 (461)
T 3sfw_A 2 KKWIRNGTVVTASDTYQADVLIDGEKVVAIGSDLQ-ATDAEVIDATGYYLLPGGIDPHTHLDMPFGGTVTSDNFFTGTKA 80 (461)
T ss_dssp EEEEESCEEECSSCEEECEEEEETTEEEEEESCCC-CSSCEEEECTTCEEEECEEEEEECTTCEETTEECSCCHHHHHHH
T ss_pred cEEEECeEEECCCCcEEEEEEEECCEEEEEeCCCC-CCCCeEEECCCCEEEeeeEEeEeccCcCCCCcccHhHHHHHHHH
Confidence 58999999999887788999999999999998653 34578999999999999999999998765556678889999999
Q ss_pred HHhCCceEEecCcCCCCC-cHHHHHHHHHHHhc-cceeeccccccccCCChhhHHHHHHHHHHhCCCeEEEEEecCCCCc
Q 020079 134 ALAGGTTMHIDFVIPING-SLTAGFEAYEKKAK-NSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFM 211 (331)
Q Consensus 134 ~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~ 211 (331)
++++||||++|+....+. ...+.++....... ...+++.++.......++.+++++++.++.|+..+|.++++.+...
T Consensus 81 ~~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~G~~~ik~~~~~~~~~~ 160 (461)
T 3sfw_A 81 AAFGGTTSIVDFCLTSKGESLHSAIATWHEKARGKAVIDYGFHLMVSDANDHVLEELESVVNNEGITSLKVFMAYKNVLM 160 (461)
T ss_dssp HHHTTEEEEEEEECCCTTSCHHHHHHHHHHHHTTTCSSEEEEEEECSCCCHHHHHHHHHHHHTSCCCEEEEESSSTTTTB
T ss_pred HHhCCEEEEEccCCCCCcchHHHHHHHHHHHhhcCcEEEEEEEEEEeCCCHHHHHHHHHHHHhCCCCEEEEEEecCCCcc
Confidence 999999999998654433 55566666555433 4566666665555556777888988883389999999988876677
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHHHhcCCCEEEEeC
Q 020079 212 INDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHV 291 (331)
Q Consensus 212 ~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~e~~~i~~~~~l~~~~g~~~~i~H~ 291 (331)
++++.+.++++.|+++|+++.+|+++...+....+.+...|...+..+...+|...|..++.+.+.+++..+.++|++|+
T Consensus 161 ~~~~~l~~~~~~a~~~g~~v~~Hae~~~~~~~~~~~~~~~G~~~~~~~~~~~p~~~e~~av~~~~~la~~~g~~~hi~H~ 240 (461)
T 3sfw_A 161 ADDETLFKTLIRAKELGALVQVHAENGDVLDYLTKQALAEGNTDPIYHAYTRPPEAEGEATGRAIALTALADAQLYVVHV 240 (461)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHHHHHHTTCCSTHHHHHTSCHHHHHHHHHHHHHHHHHTTCEEEECSC
T ss_pred cCHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHhcCCCChhHhcccCCHHHHHHHHHHHHHHHHHhCCCEEEEec
Confidence 89999999999999999999999999888887777778889888888888999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHcCCCEEEecCCccccchh
Q 020079 292 MSMDAMEEIAKARKAGPNFLNTTIPLCDSCSN 323 (331)
Q Consensus 292 ~~~~~~~~i~~~~~~Gi~v~~~~~p~~~~~~~ 323 (331)
++.+.++.++++|++|++|++++||||+.+..
T Consensus 241 s~~~~l~~i~~ak~~G~~vt~e~~ph~l~l~~ 272 (461)
T 3sfw_A 241 SCADAVRRIAEAREKGWNVYGETCPQYLVLDI 272 (461)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEEECHHHHHCCG
T ss_pred CcHHHHHHHHHHHhcCCcEEEeeccceEEEcH
Confidence 99999999999999999999999999887643
No 3
>2fty_A Dihydropyrimidinase; alpha/beta barrel, beta-sandwich, hydrolase; HET: KCX; 2.40A {Lachancea kluyveri} SCOP: b.92.1.3 c.1.9.6 PDB: 2fvk_A* 2fvm_A*
Probab=100.00 E-value=9.7e-35 Score=281.76 Aligned_cols=269 Identities=32% Similarity=0.480 Sum_probs=214.5
Q ss_pred ccEEEECcEEEeCCCceeeeEEEeCCEEEEeeCCCCCCCCceEEeCCCCeeecccccccccccCCCC-CCCChhhHHHHH
Q 020079 53 SKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFM-GSETIDDFFSGQ 131 (331)
Q Consensus 53 ~~~~i~n~~i~~~~~~~~~~v~i~~g~I~~ig~~~~~~~~~~~id~~g~~v~PG~ID~H~H~~~~~~-~~~~~~~~~~~~ 131 (331)
++++|+|++|++++...+++|+|+||+|++|++....+.+.++||++|++|+|||||+|+|+.+++. +..++++++.+.
T Consensus 3 m~~li~n~~vv~~~~~~~~~v~I~~g~I~~Ig~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~~~~e~~~~~~ 82 (559)
T 2fty_A 3 YDLIIKNGIICTASDIYAAEIAVNNGKVQLIAASIDPSLGSEVIDAEGAFITPGGIDAHVHVDEPLKLLGDVVDTMEHAT 82 (559)
T ss_dssp EEEEEESCEEECSSCEEECEEEEETTEEEEEESCCCGGGEEEEEECTTCEEEECEEECCBCCCCTTCTTSCCSCCHHHHH
T ss_pred ceEEEECcEEEcCCCceeeeEEEECCEEEEecCCCCCCCCCeEEeCCCCEEEcCEEeeccCcCccccccCCCHHHHHHHH
Confidence 4689999999998777789999999999999986432234589999999999999999999988631 223678888889
Q ss_pred HHHHhCCceEEecCcCCC---CC-c-HHHHHHH-HHHHhc-cceeeccccccccCC---Chh---hH-HHHHHHHHHhCC
Q 020079 132 AAALAGGTTMHIDFVIPI---NG-S-LTAGFEA-YEKKAK-NSCMDYGFHMAITKW---DEV---VS-DEMEVMVKEKGI 197 (331)
Q Consensus 132 ~~~l~~GvTtv~d~~~~~---~~-~-~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~---~~~---~~-~~~~~~~~~~g~ 197 (331)
+.++++||||++|+.... +. . ..+.+.. ..+... +..+++.++...... .++ .+ +++.++.++.|+
T Consensus 83 ~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~g~~l~~~~~~l~~~~G~ 162 (559)
T 2fty_A 83 RSAVAGGTTTVVAFSTQDVSKKGPSALAESVKLDVDEYSEQTLYCDYGLHLILFQIEKPSVEARELLDVQLQAAYNDYGV 162 (559)
T ss_dssp HHHHHTTEEEEEEEEECCTTCCSTTHHHHHHHHHHHHHTTSCCSSEEEEEEECCCCCSSHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHhCcEEEEEECcCcccCCcchHHHHHHHHHHHHHHHhhcceeEEEeeeeeccCcCCCchhhhhHHHHHHHHHHHCCC
Confidence 999999999999987543 22 3 3344400 022222 244455444333322 233 45 677777755699
Q ss_pred CeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHH
Q 020079 198 NSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIR 277 (331)
Q Consensus 198 ~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~e~~~i~~~~~ 277 (331)
..+|+++++++ ..+++++++++++.|+++|+++++|+++...+......+.+.|...++.+...+|...|..++.+.+.
T Consensus 163 ~~iki~~~~~~-~~~s~e~l~~~~~~A~~~g~~v~~H~e~~~~i~~~~~~~~~~G~~~~~~~~~~~p~~~E~~av~~~i~ 241 (559)
T 2fty_A 163 SSVKMFMTYPG-LQISDYDIMSAMYATRKNGFTTMLHAENGDMVKWMIEALEEQGLTDAYYHGVSRPSIVEGEATNRAIT 241 (559)
T ss_dssp CEEEEESSSTT-TBCCHHHHHHHHHHHHHHTCEEEEECCCHHHHHHHHHHHHHTTCCSTTHHHHTSCHHHHHHHHHHHHH
T ss_pred CEEEEEecCCC-CcCCHHHHHHHHHHHHhCCCEEEEECCChHHHHHHHHHHHhcCCCChhhcccCCCHHHHHHHHHHHHH
Confidence 99999998876 67899999999999999999999999888777766666778898888888888999999999999999
Q ss_pred HHHhcCCCEEEEeCCCHHHHHHHHHHHHcCCCEEEecCCccccch
Q 020079 278 LAEFVNTPLYVVHVMSMDAMEEIAKARKAGPNFLNTTIPLCDSCS 322 (331)
Q Consensus 278 l~~~~g~~~~i~H~~~~~~~~~i~~~~~~Gi~v~~~~~p~~~~~~ 322 (331)
++...+.++|++|+++.++++.++++|++|++|++++||||+.+.
T Consensus 242 la~~~g~~vhi~H~s~~~~~~~i~~ak~~G~~Vt~e~~p~~l~l~ 286 (559)
T 2fty_A 242 LATTMDTPILFVHVSSPQAAEVIKQAQTKGLKVYAETCPQYALLS 286 (559)
T ss_dssp HHHHTTCCEEECSCCCHHHHHHHHHHHHTTCCEEEEECHHHHHCC
T ss_pred HHHHhCCCEEEEcCCCHHHHHHHHHHHHcCCceEEeecCcccccC
Confidence 999999999999999998899999999999999999999987654
No 4
>3e74_A Allantoinase; (beta/alpha)8-barrel domain, small beta-sheet domain, hydrolase, metal-binding, purine metabolism, zinc; HET: KCX; 2.10A {Escherichia coli}
Probab=100.00 E-value=2e-34 Score=274.69 Aligned_cols=264 Identities=27% Similarity=0.353 Sum_probs=207.5
Q ss_pred CCccEEEECcEEEeCCCceeeeEEEeCCEEEEeeCCCCCCCCceEEeCCCCeeecccccccccccCCCCCCCChhhHHHH
Q 020079 51 SSSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSG 130 (331)
Q Consensus 51 ~~~~~~i~n~~i~~~~~~~~~~v~i~~g~I~~ig~~~~~~~~~~~id~~g~~v~PG~ID~H~H~~~~~~~~~~~~~~~~~ 130 (331)
|+.+++|+|++|++++...+++|+|+||+|++|++.... ..++||++|++|+|||||+|+|+..+ +....+++...
T Consensus 21 m~~~~~i~~~~v~~~~~~~~~~v~i~~g~I~~i~~~~~~--~~~~id~~g~~v~PG~iD~H~H~~~~--g~~~~~~~~~~ 96 (473)
T 3e74_A 21 MSFDLIIKNGTVILENEARVVDIAVKGGKIAAIGQDLGD--AKEVMDASGLVVSPGMVDAHTHISEP--GRSHWEGYETG 96 (473)
T ss_dssp -CEEEEEESCEEECSSCEEECEEEEETTEEEEEESCCCC--EEEEEECTTCEEEECEEEEEECC-----------CHHHH
T ss_pred CcCCEEEEeeEEECCCCceeeeEEEECCEEEEEcCCCCC--CCcEEECCCCEEecCEEEEecccCCC--CCCcHHHHHHH
Confidence 556899999999998887789999999999999986532 26899999999999999999999887 66778889999
Q ss_pred HHHHHhCCceEEecCc-CCCCC-cHHHHHHHHHHHh-ccceeeccccccccCCChhhHHHHHHHHHHhCCCeEEEEEec-
Q 020079 131 QAAALAGGTTMHIDFV-IPING-SLTAGFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAY- 206 (331)
Q Consensus 131 ~~~~l~~GvTtv~d~~-~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~- 206 (331)
.+.++++||||++|+. ...+. ...+.++...+.. ....+++.++...... .++++.++. +.|+..+|+++.+
T Consensus 97 ~~~~~~~G~Tt~~~~~~~t~p~~~~~~~~~~~~~~a~~~~~~d~~~~~~~~~~---~~~~l~~l~-~~G~~~~K~~~~~~ 172 (473)
T 3e74_A 97 TRAAAKGGITTMIEMPLNQLPATVDRASIELKFDAAKGKLTIDAAQLGGLVSY---NIDRLHELD-EVGVVGFKCFVATC 172 (473)
T ss_dssp HHHHHHTTEEEEEECCSSSSSCSCSHHHHHHHHHHHTTTCSSEEEECEECCTT---CTTTHHHHH-HHTCSCEEEEC---
T ss_pred HHHHHhCCEEEEEcCcccCCCCcccHHHHHHHHHHhccCCeEEEEEEeecccc---hHHHHHHHH-HcCCCEEEEecccc
Confidence 9999999999999997 44333 3344454444433 3356676665554432 245566666 6799999998874
Q ss_pred ------CCCCcCCHHHHHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHHH
Q 020079 207 ------KGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAE 280 (331)
Q Consensus 207 ------~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~e~~~i~~~~~l~~ 280 (331)
+..+.++++.+.++++.|+++|+++.+|+++..............|......+...+|...|..++.+.+.+++
T Consensus 173 ~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~e~~av~~~l~la~ 252 (473)
T 3e74_A 173 GDRGIDNDFRDVNDWQFFKGAQKLGELGQPVLVHCENALICDELGEEAKREGRVTAHDYVASRPVFTEVEAIRRVLYLAK 252 (473)
T ss_dssp ---------CCCCHHHHHHHHHHHHHHTCCEEEECSCHHHHHHHHHHHHHHTCCSHHHHHHTSCHHHHHHHHHHHHHHHH
T ss_pred CCcccccccCCCCHHHHHHHHHHHHhcCCeEEEEecCHHHHHHHhhHHHhcCCcChhhcccCCCHHHHHHHHHHHHHHHH
Confidence 24456789999999999999999999999987666555555667788888888889999999999999999999
Q ss_pred hcCCCEEEEeCCCHHHHHHHHHHHHcCCCEEEecCCccccch
Q 020079 281 FVNTPLYVVHVMSMDAMEEIAKARKAGPNFLNTTIPLCDSCS 322 (331)
Q Consensus 281 ~~g~~~~i~H~~~~~~~~~i~~~~~~Gi~v~~~~~p~~~~~~ 322 (331)
..|.++|++|+++..+++.++++|++|++|++++||||+.+.
T Consensus 253 ~~g~~lhi~Hvst~~~l~li~~ak~~G~~vt~e~~ph~l~l~ 294 (473)
T 3e74_A 253 VAGCRLHVCHVSSPEGVEEVTRARQEGQDITCESCPHYFVLD 294 (473)
T ss_dssp HHTCCEEECSCCSHHHHHHHHHHHHTTCCEEEEECTHHHHCC
T ss_pred HhCCcEEEEeCCCHHHHHHHHHHHHcCCCeEEEEchHhhhcC
Confidence 999999999999999999999999999999999999998765
No 5
>2ftw_A Dihydropyrimidine amidohydrolase; (beta-alpha)8-barrel, beta-sandwich; HET: KCX; 2.05A {Dictyostelium discoideum} SCOP: b.92.1.3 c.1.9.6
Probab=100.00 E-value=5e-34 Score=275.22 Aligned_cols=271 Identities=54% Similarity=0.844 Sum_probs=220.5
Q ss_pred ccEEEECcEEEeCCCceeeeEEEeCCEEEEeeCCCCCCCCceEEeCCCCeeecccccccccccCCCCCCCChhhHHHHHH
Q 020079 53 SKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQA 132 (331)
Q Consensus 53 ~~~~i~n~~i~~~~~~~~~~v~i~~g~I~~ig~~~~~~~~~~~id~~g~~v~PG~ID~H~H~~~~~~~~~~~~~~~~~~~ 132 (331)
.+++|+|++|++++...+++|+|+||+|++|++....+.+.++||++|++|+|||||+|+|+..++.+..++++++.+.+
T Consensus 8 ~~~lI~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~~~vIDa~G~~v~PGlID~H~H~~~~~~~~~~~e~~~~~~~ 87 (521)
T 2ftw_A 8 GTILIKNGTVVNDDRYFKSDVLVENGIIKEISKNIEPKEGIKVVDATDKLLLPGGIDTHTHFQLPFMGTVSVDDFDIGTQ 87 (521)
T ss_dssp CCEEEESCEEECSSCEEECEEEEETTEEEEEESCCCCCSSCCEEECTTCEEEECEEEEEECTTCEETTEECSSCHHHHHH
T ss_pred CCEEEECcEEECCCCceeeeEEEECCEEEEecCCCCCCCCCeEEECCCCEEecCEEeeecccCcCCCCccCHHHHHHHHH
Confidence 56999999999987777899999999999999864333356899999999999999999999876544456788888899
Q ss_pred HHHhCCceEEecCcCCCC-CcHHHHHHHHHHHhc-cceeeccccccccCCChhhHHHHHHHHHHhCCCeEEEEEecCCCC
Q 020079 133 AALAGGTTMHIDFVIPIN-GSLTAGFEAYEKKAK-NSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSF 210 (331)
Q Consensus 133 ~~l~~GvTtv~d~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~ 210 (331)
.++++||||++|+..+.. ....+.++.+..... ....++.++........+..+++.++.++.|+..+++++.+++..
T Consensus 88 ~a~~~G~Ttv~d~~~~~~~~~~~~a~~~~~~~~~~~~~~~~g~h~~~~~~~~~~~~~l~~l~~~~G~~~~k~~~~~~~~~ 167 (521)
T 2ftw_A 88 AAVAGGTTFIIDFVIPTRGQSLLEAYDQWKKWADEKVNCDYSLHVAITWWSEQVSREMEILVKERGVNSFKCFMAYKNSF 167 (521)
T ss_dssp HHHHTTEEEEEEEECCCTTCCHHHHHHHHHHHHHTTCSSEEEEEEECCSCCHHHHHHHHHHHHHSCCCEEEEESSCTTTT
T ss_pred HHHhCCcceecCcCCCCCCcCHHHHHHHHHHHhhcCceeeEeeEEeecCCChhHHHHHHHHHHhCCCCEEEEEeccCCCc
Confidence 999999999999764332 245555555444332 234455555544444455567777777557999999998877777
Q ss_pred cCCHHHHHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHHHhcCCCEEEEe
Q 020079 211 MINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVH 290 (331)
Q Consensus 211 ~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~e~~~i~~~~~l~~~~g~~~~i~H 290 (331)
.+++++++++++.|+++|+++++|+++........+.+.+.|+..+.+|...+|...|..++.+.+.++...++++|+.|
T Consensus 168 ~~~~e~l~~~~~~A~~~g~~v~vH~e~~~~~~~~~~~l~~~G~~~~~~h~~~~~~~~e~~a~~~~~~la~~~~~p~hi~h 247 (521)
T 2ftw_A 168 MVTDQEMYHIFKRCKELGAIAQVHAENGDMVFEGQKKMLEMGITGPEGHELSRPEALEAEATNRAIVIADSVCTPVYIVH 247 (521)
T ss_dssp BCCHHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHHHHHHTTCCSTHHHHHHSCTHHHHHHHHHHHHHHHHHTCCEEECS
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHHcCCCChhhccccCcHHHHHHHHHHHHHHHHHhCCCEEEEe
Confidence 88999999999999999999999998876666667788999999998888788888888888888889989999999999
Q ss_pred CCCHHHHHHHHHHHHcCCCEEEecCCccccchh
Q 020079 291 VMSMDAMEEIAKARKAGPNFLNTTIPLCDSCSN 323 (331)
Q Consensus 291 ~~~~~~~~~i~~~~~~Gi~v~~~~~p~~~~~~~ 323 (331)
+++...++.++++++.|++|++++||+++...+
T Consensus 248 ~ss~~~~~~i~~~r~~G~~v~~e~~~~~L~~d~ 280 (521)
T 2ftw_A 248 VQSIGAADVICKHRKEGVRVYGEPIAAGLGVDG 280 (521)
T ss_dssp CCCHHHHHHHHHHHHTTCCEEECCBHHHHHCCG
T ss_pred cCcHHHHHHHHHHHHcCCeEEEEEcchhhccCH
Confidence 999888899999999999999999999886543
No 6
>1gkp_A Hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX EPE; 1.29A {Thermus SP} SCOP: b.92.1.3 c.1.9.6 PDB: 1gkq_A*
Probab=100.00 E-value=1e-33 Score=268.63 Aligned_cols=266 Identities=34% Similarity=0.553 Sum_probs=215.2
Q ss_pred EEEECcEEEeCCCceeeeEEEeCCEEEEeeCCCCCCCCceEEeCCCCeeecccccccccccCCCCCCCChhhHHHHHHHH
Q 020079 55 ILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAAA 134 (331)
Q Consensus 55 ~~i~n~~i~~~~~~~~~~v~i~~g~I~~ig~~~~~~~~~~~id~~g~~v~PG~ID~H~H~~~~~~~~~~~~~~~~~~~~~ 134 (331)
++|+|++|++++...+++|+|+||||++|++....+++.++||++|++|+|||||+|+|+.+++.+..++++++...+.+
T Consensus 2 ~li~n~~vv~~~~~~~~~v~I~~g~I~~ig~~~~~~~~~~viD~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~~~~~~ 81 (458)
T 1gkp_A 2 LLIKNGEIITADSRYKADIYAEGETITRIGQNLEAPPGTEVIDATGKYVFPGFIDPHVHIYLPFMATFAKDTHETGSKAA 81 (458)
T ss_dssp EEEESCEEEETTEEEECEEEESSSBCCEEESCCCCCTTCEEEECTTSEEEECEEEEEECSSCEETTEECSCCHHHHHHHH
T ss_pred EEEEeeEEECCCCceEeeEEEECCEEEEecCCCCCCCCCeEEECCCCEEecCEEecccCCCcCCCCCcCHhHHHHHHHHH
Confidence 78999999998766788999999999999986432335689999999999999999999987643444678888888889
Q ss_pred HhCCceEEecCcCCCC-CcHHHHHHHHHHHh-ccceeeccccccccCCChhhHHHHHHHHHHhCCCeEEEEEecCCCCcC
Q 020079 135 LAGGTTMHIDFVIPIN-GSLTAGFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMI 212 (331)
Q Consensus 135 l~~GvTtv~d~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~ 212 (331)
+++||||++|+....+ ....+.++...+.. .+..+++.++.......++..++++++. +.|+..+|+++++++...+
T Consensus 82 ~~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~ 160 (458)
T 1gkp_A 82 LMGGTTTYIEMCCPSRNDDALEGYQLWKSKAEGNSYCDYTFHMAVSKFDEKTEGQLREIV-ADGISSFKIFLSYKNFFGV 160 (458)
T ss_dssp HHTTEEEEEEEECCCTTSCHHHHHHHHHHHHTTTCSSEEEEEEECCCCCTTHHHHHHHHH-HTTCCEEEEEECSTTTTBC
T ss_pred HhCCccEEEeCCCCCCCCCHHHHHHHHHHHhccCceeeEEEEEeecCCchhhHHHHHHHH-HhCCCEEEEEeccCCCcCC
Confidence 9999999999865432 24555555544432 2344455444433334445677888887 6789999999888777788
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHHHhcCCCEEEEeCC
Q 020079 213 NDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVM 292 (331)
Q Consensus 213 ~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~e~~~i~~~~~l~~~~g~~~~i~H~~ 292 (331)
+++.+.++++.|+++++++++|+|+..+.....+.+.+.|.....++...+|...|..++.+.+.++...|.+++++|++
T Consensus 161 ~~~~l~~~~~~a~~~~~~v~~H~e~~~~~~~~~~~~~~~G~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~~~H~~ 240 (458)
T 1gkp_A 161 DDGEMYQTLRLAKELGVIVTAHCENAELVGRLQQKLLSEGKTGPEWHEPSRPEAVEAEGTARFATFLETTGATGYVVHLS 240 (458)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHTTCCSGGGTTTTSCHHHHHHHHHHHHHHHHHHTCEEEECSCC
T ss_pred CHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHhcCCCChhhccCcCCHHHHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence 99999999999999999999999887777666666778898888888878888888888999999999999999999999
Q ss_pred CHHHHHHHHHHHHcCCCEEEecCCccccc
Q 020079 293 SMDAMEEIAKARKAGPNFLNTTIPLCDSC 321 (331)
Q Consensus 293 ~~~~~~~i~~~~~~Gi~v~~~~~p~~~~~ 321 (331)
+...++.++.+++.|++|++++||+|+.+
T Consensus 241 ~~~~~~~i~~~~~~G~~v~~~~~p~~~~~ 269 (458)
T 1gkp_A 241 CKPALDAAMAAKARGVPIYIESVIPHFLL 269 (458)
T ss_dssp SHHHHHHHHHHHHTTCCEEEEEEHHHHHC
T ss_pred CHHHHHHHHHHHHcCCeEEEEecccceee
Confidence 98888999999999999999999996533
No 7
>3hm7_A Allantoinase; metallo-dependent hydrolase, protein structure initiative, PSI-2, NEW YORK structural genomix research CON nysgxrc; 2.60A {Bacillus halodurans}
Probab=100.00 E-value=1.6e-33 Score=266.99 Aligned_cols=265 Identities=29% Similarity=0.396 Sum_probs=213.6
Q ss_pred CCccEEEECcEEEeCCCceeeeEEEeCCEEEEeeC--CCCCCCCceEEeCCCCeeecccccccccccCCCCCCCChhhHH
Q 020079 51 SSSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQP--NINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFF 128 (331)
Q Consensus 51 ~~~~~~i~n~~i~~~~~~~~~~v~i~~g~I~~ig~--~~~~~~~~~~id~~g~~v~PG~ID~H~H~~~~~~~~~~~~~~~ 128 (331)
++++++|+|++|++++...+++|+|+||+|++|++ ... +++.++||++|++|+|||||+|+|+..+ +....+++.
T Consensus 4 ~~~~~~i~~~~v~~~~~~~~~~v~i~~g~I~~i~~~~~~~-~~~~~~id~~g~~v~PG~ID~H~H~~~~--~~~~~~~~~ 80 (448)
T 3hm7_A 4 KRFDLIIRSSTVVTETTTYRADVAIRNGIVSAITEPGSIS-SDDGPAIDGTGLHLFPGMVDVHVHFNEP--GRTEWEGFA 80 (448)
T ss_dssp -CCSEEEEEEEEECSSCEEEEEEEEETTEEEEEESTTCSC-TTSSCEEECTTCEEEECEEEEEECCCTT--TSGGGCCSH
T ss_pred CcccEEEEeeEEECCCCceEeEEEEECCEEEEeeCccCCC-CCCCeEEECCCCEEecCEEEeeeccCCC--CCCcHhHHH
Confidence 34679999999999887788999999999999998 432 3456899999999999999999999877 555567778
Q ss_pred HHHHHHHhCCceEEecCc-CCCCC-cHHHHHHHHHHHhc-cceeeccccccccCCChhhHHHHHHHHHHhCCCeEEEEEe
Q 020079 129 SGQAAALAGGTTMHIDFV-IPING-SLTAGFEAYEKKAK-NSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMA 205 (331)
Q Consensus 129 ~~~~~~l~~GvTtv~d~~-~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~ 205 (331)
...+.++++|||+++++. ...+. ...+.+....+... ...+++.++.+..... .+++.++. +.|+.+++.+++
T Consensus 81 ~~~~~~~~~Gvtt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~l~-~~g~~~~~~~l~ 156 (448)
T 3hm7_A 81 SGSKSLAAGGVTTYFDMPLNSNPPTITREELDKKRQLANEKSLVDYRFWGGLVPGN---IDHLQDLH-DGGVIGFKAFMS 156 (448)
T ss_dssp HHHHHHHTTTEEEEEECSSSSSSCSCSHHHHHHHHTHHHHHCSSEEEEEEECCTTC---GGGHHHHH-HTTCSEEEEESS
T ss_pred HHHHHHHhCCEEEEEeCCCCCCCCCChHHHHHHHHHHhccCCeeEEEEEEEecccC---HHHHHHHH-HcCCCEEEEeec
Confidence 888999999999999986 43332 33444444433332 2445555555443322 45566666 589999998887
Q ss_pred cCCC---CcCCHHHHHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHHHhc
Q 020079 206 YKGS---FMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFV 282 (331)
Q Consensus 206 ~~~~---~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~e~~~i~~~~~l~~~~ 282 (331)
+... ...+++.+.++++.|+++|+++.+|+++........+.+...|......+...+|...|..++.+.+.+++..
T Consensus 157 ~~~~~~~~~~~~~~l~~~l~~a~~~g~~v~vH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~e~~av~~~~~la~~~ 236 (448)
T 3hm7_A 157 ECGTDDFQFSHDETLLKGMKKIAALGSILAVHAESNEMVNALTTIAIEEQRLTVKDYSEARPIVSELEAVERILRFAQLT 236 (448)
T ss_dssp SCSSSSSCCCCHHHHHHHHHHHHHHTCCEEEECCCHHHHHHHHHHHHHTTCCSHHHHHHHSCHHHHHHHHHHHHHHHHHH
T ss_pred cccCCccCcCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCcChhhccccCCHHHHHHHHHHHHHHHHHh
Confidence 6432 3458999999999999999999999998877666666677888888888888899999999999999999999
Q ss_pred CCCEEEEeCCCHHHHHHHHHHHHcCCCEEEecCCccccch
Q 020079 283 NTPLYVVHVMSMDAMEEIAKARKAGPNFLNTTIPLCDSCS 322 (331)
Q Consensus 283 g~~~~i~H~~~~~~~~~i~~~~~~Gi~v~~~~~p~~~~~~ 322 (331)
|.+++++|+++...++.++++|++|++|++++||||+.+.
T Consensus 237 g~~~~i~H~s~~~~~~~i~~ak~~G~~v~~e~~ph~l~l~ 276 (448)
T 3hm7_A 237 CCPIHICHVSSRKVLKRIKQAKGEGVNVSVETCPHYLLFS 276 (448)
T ss_dssp TCCEEECCCCCHHHHHHHHHHHHTTCCEEEEECHHHHHCC
T ss_pred CCCEEEEeCCCHHHHHHHHHHHhcCCCEEEEechHHHccC
Confidence 9999999999999999999999999999999999998764
No 8
>2vr2_A Dihydropyrimidinase; hydantoinase, metal-binding, disease mutation, dihydropyrimi amidohydrolase, nucleotide metabolism, DPYS, dhpase, hydrolase; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.8e-33 Score=270.19 Aligned_cols=271 Identities=52% Similarity=0.870 Sum_probs=216.2
Q ss_pred CccEEEECcEEEeCCCceeeeEEEeCCEEEEeeCCCCCCCCc----eEEeCCCCeeecccccccccccCCCCCCCChhhH
Q 020079 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDV----KVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDF 127 (331)
Q Consensus 52 ~~~~~i~n~~i~~~~~~~~~~v~i~~g~I~~ig~~~~~~~~~----~~id~~g~~v~PG~ID~H~H~~~~~~~~~~~~~~ 127 (331)
+.+++|+|++|++++...+++|+|+||+|++|++....+.+. ++||++|++|+|||||+|+|+.+++.+..+++++
T Consensus 26 ~~~~lI~ng~Vv~~~~~~~~dV~I~dGrI~~Ig~~~~~~~~~~~~~~vIDa~G~~V~PG~ID~H~Hl~~~~~~~~~~e~~ 105 (541)
T 2vr2_A 26 PSRLLIRGGRVVNDDFSEVADVLVEDGVVRALGHDLLPPGGAPAGLRVLDAAGKLVLPGGIDTHTHMQFPFMGSRSIDDF 105 (541)
T ss_dssp -CEEEEESCEEECSSCEEECEEEEETTEEEEEEC-----------CEEEECTTSEEEECEEEEEECTTCBCSSSBCSCCT
T ss_pred cCCEEEECcEEEcCCCceEeeEEEECCEEEEeccCCCCCcccccCceEEECCCCEEccCEEEecccCCCCCCCCcCHHHH
Confidence 357999999999987767899999999999999864322222 8999999999999999999998875444567888
Q ss_pred HHHHHHHHhCCceEEecCcCCCCC-cHHHHHHHHHHHhc-cceeeccccccccCCChhhHHHHHHHHHHhCCCeEEEEEe
Q 020079 128 FSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAK-NSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMA 205 (331)
Q Consensus 128 ~~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~ 205 (331)
+.+.+.++++||||++|+..+... ...+.++.+..... ....++.++.......++..+++.++.++.|+..+|.+++
T Consensus 106 ~~~~~~al~~GvTtv~d~~~~~~~~~~~~a~~~~~~~~~~~~~~~~g~h~~~~~~~~~~~~el~~l~~~~G~~~~k~~~~ 185 (541)
T 2vr2_A 106 HQGTKAALSGGTTMIIDFAIPQKGGSLIEAFETWRSWADPKVCCDYSLHVAVTWWSDQVKEEMKILVQDKGVNSFKMFMA 185 (541)
T ss_dssp THHHHHHHTTTEEEEEEEECCCTTCCHHHHHHHHHHHHTTTCSSEEEEEEEECSCSHHHHHHHHHHHHTSCCCEEEEESS
T ss_pred HHHHHHHHhCCeeeeccccCCCCCCCHHHHHHHHHHHhccCceEEEeeeecccCCCHHHHHHHHHHHHhCCCCEEEEEec
Confidence 888899999999999998654322 45555555544332 2344555554444444556677777775579999999998
Q ss_pred cCCCCcCCHHHHHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHHHhcCCC
Q 020079 206 YKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTP 285 (331)
Q Consensus 206 ~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~e~~~i~~~~~l~~~~g~~ 285 (331)
+++.+.+++++++++++.|+++++++++|+|+........+.+.+.|+..+.+|...++...|..++.+.+.++...+++
T Consensus 186 ~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~h~~~~~~~~e~~a~~~~~~la~~~~~p 265 (541)
T 2vr2_A 186 YKDLYMVTDLELYEAFSRCKEIGAIAQVHAENGDLIAEGAKKMLALGITGPEGHELCRPEAVEAEATLRAITIASAVNCP 265 (541)
T ss_dssp STTTTBCCHHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHHHHHHTTCCSTHHHHHTSCHHHHHHHHHHHHHHHHHHTCC
T ss_pred cCCccCCCHHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHHcCCCChhhccccchhHHHHHHHHHHHHHHHHhCCC
Confidence 88778889999999999999999999999988776666677889999999888877788888888888888999999999
Q ss_pred EEEEeCCCHHHHHHHHHHHHcCCCEEEecCCccccch
Q 020079 286 LYVVHVMSMDAMEEIAKARKAGPNFLNTTIPLCDSCS 322 (331)
Q Consensus 286 ~~i~H~~~~~~~~~i~~~~~~Gi~v~~~~~p~~~~~~ 322 (331)
+|+.|+++...++.++++++.|+.|++++||+++...
T Consensus 266 ~~~~h~ss~~~~~~i~~ar~~G~~v~~e~~~~~L~~d 302 (541)
T 2vr2_A 266 LYIVHVMSKSAAKVIADARRDGKVVYGEPIAASLGTD 302 (541)
T ss_dssp EEEEEECCHHHHHHHHHHHHTTCCEEEEEBHHHHHCC
T ss_pred EEEEeCCCHHHHHHHHHHHHcCCeEEEEeehhhhcCC
Confidence 9999999888889999999999999999999887543
No 9
>2vm8_A Dihydropyrimidinase-related protein 2; neurogenesis, phosphoprotein, differentiation, CRMP, cytoplasm, TIM barrel, polymorphism, axonal pathfinding; 1.9A {Homo sapiens} PDB: 2gse_A 1kcx_A
Probab=100.00 E-value=1.8e-32 Score=263.21 Aligned_cols=269 Identities=45% Similarity=0.755 Sum_probs=212.4
Q ss_pred ccEEEECcEEEeCCCceeeeEEEeCCEEEEeeCCCCCCCCceEEeCCCCeeecccccccccccCCCCCCCChhhHHHHHH
Q 020079 53 SKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQA 132 (331)
Q Consensus 53 ~~~~i~n~~i~~~~~~~~~~v~i~~g~I~~ig~~~~~~~~~~~id~~g~~v~PG~ID~H~H~~~~~~~~~~~~~~~~~~~ 132 (331)
.+++|+|++|++++...+++|+|+||||++|++....+++.++||++|++|+|||||+|+|+..+..+..++++++...+
T Consensus 26 ~~~li~n~~v~~~~~~~~~~V~I~~grI~~Ig~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~~~~~~e~~~~~~~ 105 (501)
T 2vm8_A 26 DRLLIKGGKIVNDDQSFYADIYMEDGLIKQIGENLIVPGGVKTIEAHSRMVIPGGIDVHTRFQMPDQGMTSADDFFQGTK 105 (501)
T ss_dssp CCEEEEEEEEECSSCEEEEEEEEETTEEEEEESSCCCCSSSCEEECTTCEEEECEEEEEECTTCEETTEECSSCHHHHHH
T ss_pred CCEEEEeeEEECCCCceEeeEEEECCEEEEeccCCCCCCCCeEEECCCCEEeeCEEEeeecccccccCCCcHHHHHHHHH
Confidence 57899999999987767899999999999999864333456899999999999999999999876433345788888889
Q ss_pred HHHhCCceEEecCcCCCC-CcHHHHHHHHHHHhcc-ceeeccccccccCCChhhHHHHHHHHHHhCCCeEEEEEecCCCC
Q 020079 133 AALAGGTTMHIDFVIPIN-GSLTAGFEAYEKKAKN-SCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSF 210 (331)
Q Consensus 133 ~~l~~GvTtv~d~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~ 210 (331)
.++++||||++|+....+ ....+.++...+...+ ...+++++........+..++++++.++.|+..++.++.++...
T Consensus 106 ~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~e~~~l~~~~G~~~i~~~~~~~~~~ 185 (501)
T 2vm8_A 106 AALAGGTTMIIDHVVPEPGTSLLAAFDQWREWADSKSCCDYSLHVDISEWHKGIQEEMEALVKDHGVNSFLVYMAFKDRF 185 (501)
T ss_dssp HHHHTTEEEEEEEECCCTTSCHHHHHHHHHHHHHHHCSSEEEEEEECCSCSHHHHHHHHHHHHHSCCCEEEEESSSTTTT
T ss_pred HHHhCCcEEEEeCCCCCCCCChHHHHHHHHHHHhcCCeeEEEEEEEecCCCcccHHHHHHHHHhCCceEEEEeeccCCCC
Confidence 999999999999865433 2444555554443322 23344444332233334556777777557899999988766556
Q ss_pred cCCHHHHHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHHHhcCCCEEEEe
Q 020079 211 MINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVH 290 (331)
Q Consensus 211 ~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~e~~~i~~~~~l~~~~g~~~~i~H 290 (331)
..+.++++++++.|+++|+++.+|+++..........+.+.|.....++...+|...+..++.+.+.++...|.++|+.|
T Consensus 186 ~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~g~~~hi~h 265 (501)
T 2vm8_A 186 QLTDCQIYEVLSVIRDIGAIAQVHAENGDIIAEEQQRILDLGITGPEGHVLSRPEEVEAEAVNRAITIANQTNCPLYITK 265 (501)
T ss_dssp BCCHHHHHHHHHHHHHHTCEEEEECCCHHHHHHHHHHHHTTTCCSTHHHHHHSCHHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred CCCHHHHHHHHHHHHHhCCEEEEEccChHHHHHHHHHHHhcCCCChhhccccCCHHHHHHHHHHHHHHHHHhCCcEEEEe
Confidence 78999999999999999999999998776656666677888998888888888888888889999999999999999999
Q ss_pred CCCHHHHHHHHHHHHcCCCEEEecCCccccc
Q 020079 291 VMSMDAMEEIAKARKAGPNFLNTTIPLCDSC 321 (331)
Q Consensus 291 ~~~~~~~~~i~~~~~~Gi~v~~~~~p~~~~~ 321 (331)
+++...++.++++++.|+.|++++|||++.+
T Consensus 266 ~~~~~~~~~i~~~~~~G~~v~~~~~~~~l~~ 296 (501)
T 2vm8_A 266 VMSKSSAEVIAQARKKGTVVYGEPITASLGT 296 (501)
T ss_dssp ECCHHHHHHHHHHHHTTCCEEEEEBHHHHHC
T ss_pred CCcHHHHHHHHHHHhCCCcEEEEEChhHhhc
Confidence 9998888999999999999988898877543
No 10
>1gkr_A Hydantoinase, non-ATP dependent L-selective hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX; 2.60A {Arthrobacter aurescens} SCOP: b.92.1.3 c.1.9.6
Probab=100.00 E-value=2.7e-31 Score=251.87 Aligned_cols=263 Identities=26% Similarity=0.305 Sum_probs=201.5
Q ss_pred ccEEEECcEEEeCCCceeeeEEEeCCEEEEeeCCCCCCCCceEEeCCCCeeecccccccccccCCCCC-CCChhhHHHHH
Q 020079 53 SKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMG-SETIDDFFSGQ 131 (331)
Q Consensus 53 ~~~~i~n~~i~~~~~~~~~~v~i~~g~I~~ig~~~~~~~~~~~id~~g~~v~PG~ID~H~H~~~~~~~-~~~~~~~~~~~ 131 (331)
.+++|+|++|++++...+++|+|+||+|++|++....+++.++||++|++|+|||||+|+|+..+ + ..++++++...
T Consensus 2 ~~~li~~~~v~~~~~~~~~~v~I~~g~I~~ig~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~--~~~~~~~~~~~~~ 79 (458)
T 1gkr_A 2 FDVIVKNCRLVSSDGITEADILVKDGKVAAISADTSDVEASRTIDAGGKFVMPGVVDEHVHIIDM--DLKNRYGRFELDS 79 (458)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEETTEEEEEESCCTTCCEEEEEECTTCEEEECEEEEEEECCCG--GGTTTSCCHHHHH
T ss_pred ceEEEECcEEECCCCceeeeEEEECCEEEEecCCCCCCCCCeEEeCCCCEEecCEEEeeecccCC--CCCCchhHHHHHH
Confidence 46899999999987667899999999999999864323346899999999999999999999875 3 34567788888
Q ss_pred HHHHhCCceEEecCc-CCCCC-cHHHHHHHHHHHhccceeeccccccccCCChhhHHHHHHHHHHhCCCeEEEEEecCC-
Q 020079 132 AAALAGGTTMHIDFV-IPING-SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKG- 208 (331)
Q Consensus 132 ~~~l~~GvTtv~d~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~- 208 (331)
+.++++||||++|+. ...+. ...+.++...+......+++.++.+... +..++++++. +.|+..+|++++++.
T Consensus 80 ~~~~~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~g~~~i~~~~~~~~~ 155 (458)
T 1gkr_A 80 ESAAVGGITTIIEMPITFPPTTTLDAFLEKKKQAGQRLKVDFALYGGGVP---GNLPEIRKMH-DAGAVGFKSMMAASVP 155 (458)
T ss_dssp HHHHHHTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHCSSEEEEEEECCT---TCHHHHHHHH-HTTCCEEEEESSCSBT
T ss_pred HHHHcCCEEEEEeCCCCCCCCCCcHHHHHHHHHHhhhCceeEEEEeccCC---CCHHHHHHHH-HcCCcEEEEeecccCC
Confidence 889999999999987 33222 3344444433332211144433332221 2345677777 578999999887653
Q ss_pred --CCcCCHHHHHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHHHhcCCCE
Q 020079 209 --SFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPL 286 (331)
Q Consensus 209 --~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~e~~~i~~~~~l~~~~g~~~ 286 (331)
....+.+.++++++.|+++|+++++|+++..........+.+.|......|....+...+...+++.+.++.+.|.++
T Consensus 156 ~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~G~~~~~~h~~~~~~~~~~~~~~~~~~la~~~g~~~ 235 (458)
T 1gkr_A 156 GMFDAVSDGELFEIFQEIAACGSVIVVHAENETIIQALQKQIKAAGGKDMAAYEASQPVFQENEAIQRALLLQKEAGCRL 235 (458)
T ss_dssp TTBCBCCHHHHHHHHHHHHHHTCEEEEECCCHHHHHHHHHHHHHTTCCSHHHHHHHSCHHHHHHHHHHHHHHHHHHCCEE
T ss_pred CCcccCCHHHHHHHHHHHHHcCCEEEEECCCHHHHHHHHHHHhhcCccchhhccccCCHHHHHHHHHHHHHHHHHhCCCE
Confidence 356789999999999999999999999877666555556667787555566666777777788888899999999999
Q ss_pred EEEeCCCHHHHHHHHHHHHcCCCEEEecCCccccc
Q 020079 287 YVVHVMSMDAMEEIAKARKAGPNFLNTTIPLCDSC 321 (331)
Q Consensus 287 ~i~H~~~~~~~~~i~~~~~~Gi~v~~~~~p~~~~~ 321 (331)
|+.|+++...++.++++|+.|+++++++|||++.+
T Consensus 236 h~~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~~~~ 270 (458)
T 1gkr_A 236 IVLHVSNPDGVELIHQAQSEGQDVHCESGPQYLNI 270 (458)
T ss_dssp EECCCCSHHHHHHHHHHHHTTCCEEEEECHHHHSC
T ss_pred EEEeCCCHHHHHHHHHHHHCCCcEEEEEchHHhee
Confidence 99999988888889889999999999999998653
No 11
>3gri_A Dihydroorotase, dhoase; hydrolase, IDP00795, metal-binding, pyrimidine biosynthesis, structural genomics; 2.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=2.1e-32 Score=257.52 Aligned_cols=258 Identities=24% Similarity=0.310 Sum_probs=192.4
Q ss_pred EEEECcEEEeCCCceeeeEEEeCCEEEEeeCCCCCCCCceEEeCCCCeeecccccccccccCCCCCCCChhhHHHHHHHH
Q 020079 55 ILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAAA 134 (331)
Q Consensus 55 ~~i~n~~i~~~~~~~~~~v~i~~g~I~~ig~~~~~~~~~~~id~~g~~v~PG~ID~H~H~~~~~~~~~~~~~~~~~~~~~ 134 (331)
++|+|++|++.....+++|+|+||+|++|++....+++.++||++|++|+|||||+|+|+..+ +....+++....+.+
T Consensus 2 ~~i~~~~v~~~~~~~~~~v~i~~g~I~~i~~~~~~~~~~~~id~~g~~v~PG~iD~H~H~~~~--g~~~~~~~~~~~~~~ 79 (424)
T 3gri_A 2 KLIKNGKVLQNGELQQADILIDGKVIKQIAPAIEPSNGVDIIDAKGHFVSPGFVDVHVHLREP--GGEYKETIETGTKAA 79 (424)
T ss_dssp EEEESCEEEETTEEEECEEEEETTEEEEEESCCCCCSSCEEEECTTCEEEECEEEEEECCCTT--TCTTTCCHHHHHHHH
T ss_pred EEEEeeEEEcCCCceeeeEEEECCEEEEecCCCCCCCCCeEEECCCCEEEeCeEEeeecCCCC--CCCCHHHHHHHHHHH
Confidence 789999999944457899999999999999875534467899999999999999999999876 667788899999999
Q ss_pred HhCCceEEecCcCCCCC-cHHHHHHHHHHHhcc-ceeeccccccccC-CChhhHHHHHHHHHHhCCCeEEEEEecCCCCc
Q 020079 135 LAGGTTMHIDFVIPING-SLTAGFEAYEKKAKN-SCMDYGFHMAITK-WDEVVSDEMEVMVKEKGINSFKFFMAYKGSFM 211 (331)
Q Consensus 135 l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~ 211 (331)
+++|||+++++....+. ...+.++...+.... ...++..+..... ...+.+.++.++. +.|...+ .+++.+.
T Consensus 80 ~~~G~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~-~~G~~~~----~~~~~~~ 154 (424)
T 3gri_A 80 ARGGFTTVCPMPNTRPVPDSVEHFEALQKLIDDNAQVRVLPYASITTRQLGKELVDFPALV-KEGAFAF----TDDGVGV 154 (424)
T ss_dssp HHTTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHCSSEECCCEESBGGGCSSSBCCHHHHH-TTTCCCE----EECSSCC
T ss_pred HhCCEEEEeECcCCCCCCChHHHHHHHHHHhccCCCceEEEEEEEecCCCcchHHHHHHHH-hcCcEEE----ecCCcCc
Confidence 99999999998754333 333444443333322 2223333322221 1122334566666 5676655 3455667
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHHHhcCCCEEEEeC
Q 020079 212 INDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHV 291 (331)
Q Consensus 212 ~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~e~~~i~~~~~l~~~~g~~~~i~H~ 291 (331)
.+++.++++++.|+++|+++++|+++........ ...|....+.+...+|...|..++.+.+.+++..|.++|++|+
T Consensus 155 ~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~---~~~g~~~~~~~~~~~p~~~E~~~v~r~~~la~~~g~~~~i~H~ 231 (424)
T 3gri_A 155 QTASMMYEGMIEAAKVNKAIVAHCEDNSLIYGGA---MHEGKRSKELGIPGIPNICESVQIARDVLLAEAAGCHYHVCHV 231 (424)
T ss_dssp CSHHHHHHHHHHHHHHTCCEEECCCCGGGCTTCC---EESSHHHHHHTCCEECTHHHHHHHHHHHHHHHHHTCCEEECSC
T ss_pred CCHHHHHHHHHHHHhcCCEEEEeCCCHHHHhhhh---hhcCccchhhCCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEeC
Confidence 8999999999999999999999998876432100 0001111122334578888999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHcCCCEEEecCCccccch
Q 020079 292 MSMDAMEEIAKARKAGPNFLNTTIPLCDSCS 322 (331)
Q Consensus 292 ~~~~~~~~i~~~~~~Gi~v~~~~~p~~~~~~ 322 (331)
++...++.++++|++|++|++++||||+.++
T Consensus 232 s~~~~~~~i~~ak~~G~~v~~e~~ph~l~l~ 262 (424)
T 3gri_A 232 STKESVRVIRDAKRAGIHVTAEVTPHHLLLT 262 (424)
T ss_dssp CCHHHHHHHHHHHHTTCCEEEEECHHHHHCC
T ss_pred CCHHHHHHHHHHHHcCCCEEEEecHHHHhcC
Confidence 9999999999999999999999999999765
No 12
>1nfg_A D-hydantoinase; TIM barrel, hydrolase; HET: KCX; 2.70A {Ralstonia pickettii} SCOP: b.92.1.3 c.1.9.6
Probab=100.00 E-value=2.8e-31 Score=251.89 Aligned_cols=266 Identities=38% Similarity=0.613 Sum_probs=206.7
Q ss_pred cEEEECcEEEeCCCceeeeEEEeCCEEEEeeCCCCCCCCceEEeCCCCeeecccccccccccCCCCCCCChhhHHHHHHH
Q 020079 54 KILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAA 133 (331)
Q Consensus 54 ~~~i~n~~i~~~~~~~~~~v~i~~g~I~~ig~~~~~~~~~~~id~~g~~v~PG~ID~H~H~~~~~~~~~~~~~~~~~~~~ 133 (331)
+++|+|++|++++...+++|+|+||+|++|++... ++.++||++|++|+|||||+|+|+.+......++++++...+.
T Consensus 2 ~~li~n~~v~~~~~~~~~~v~I~~g~I~~ig~~~~--~~~~viD~~G~~v~PGlID~H~H~~~~~~~~~~~e~~~~~~~~ 79 (457)
T 1nfg_A 2 DIIIKNGTIVTADGISRADLGIKDGKITQIGGALG--PAERTIDAAGRYVFPGGIDVHTHVETVSFNTQSADTFATATVA 79 (457)
T ss_dssp CEEEEEEEEEETTEEEEEEEEEETTEEEEESSCCC--CCSEEEECTTCEEEECEEEEEECCSCEETTEECSCCHHHHHHH
T ss_pred cEEEEeeEEEeCCCceeeeEEEECCEEEEecCCCC--CCCeEEeCCCCEEccceEeeccccccCcCCCCChhhHHHHHHH
Confidence 48999999999877678999999999999997542 3468999999999999999999997432122256788888899
Q ss_pred HHhCCceEEecCcCCCC-CcHHHHHHHHHHHhc-cceeeccccccccCCChhhHHHHHHHHHHhCCCeEEEEEecCCCCc
Q 020079 134 ALAGGTTMHIDFVIPIN-GSLTAGFEAYEKKAK-NSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFM 211 (331)
Q Consensus 134 ~l~~GvTtv~d~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~ 211 (331)
++++||||++|+....+ ....+.++....... ...+++.++......+.+..++++++. +.|+..+|.++++.....
T Consensus 80 ~~~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~G~~~~k~~~~~~~~~~ 158 (457)
T 1nfg_A 80 AACGGTTTIVDFCQQDRGHSLAEAVAKWDGMAGGKSAIDYGYHIIVLDPTDSVIEELEVLP-DLGITSFKVFMAYRGMNM 158 (457)
T ss_dssp HHHTTEEEEEEEEECCTTSCHHHHHHHHHHHHTTTCSSEEEEEEECSSCCHHHHHHTTTGG-GGTCCEEEEESSSTTTTB
T ss_pred HHhCCcEEEEeCCCCCCCCChHHHHHHHHHHhcccCccCEEEEEeecCCchhHHHHHHHHH-HcCCCEEEEeeccCCCCC
Confidence 99999999999865322 245555655544432 244455555444444444445555555 679999999877653345
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHHHhcCCCEEEEeC
Q 020079 212 INDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHV 291 (331)
Q Consensus 212 ~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~e~~~i~~~~~l~~~~g~~~~i~H~ 291 (331)
.+.+.+.++++.+++.++++.+|+++........+.+.+.|......|....|...+.+.+++.++++++.|.++|+.|+
T Consensus 159 ~~~~~~~~~~~~a~~~~~~v~~H~e~~~~~~~~~~~~~~~g~~~~~~h~~~~~~~~~~~~~~~~~~~a~~~g~~~~~~H~ 238 (457)
T 1nfg_A 159 IDDVTLLKTLDKAVKTGSLVMVHAENGDAADYLRDKFVAEGKTAPIYHALSRPPRVEAEATARALALAEIVNAPIYIVHV 238 (457)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEECCCHHHHHHHHHHHHHTTCCSTHHHHHTSCHHHHHHHHHHHHHHHHHHTCCEEECCC
T ss_pred CCHHHHHHHHHHHHhcCCEEEEeCCCHHHHHHHHHHHHhcCCcchhhccccCCHHHHHHHHHHHHHHHHHHCCCEEEEeC
Confidence 67888999999999999999999998777666666667788766666666678888888899999999999999999999
Q ss_pred CCHHHHHHHHHHHHcCCCEEEecCCccccch
Q 020079 292 MSMDAMEEIAKARKAGPNFLNTTIPLCDSCS 322 (331)
Q Consensus 292 ~~~~~~~~i~~~~~~Gi~v~~~~~p~~~~~~ 322 (331)
++...++.++++|+.|++++++++||+..+.
T Consensus 239 ~~~~~~~~~~~~~~~G~~v~~~~~~h~~~~~ 269 (457)
T 1nfg_A 239 TCEESLEEVMRAKSRGVRALAETCTHYLYLT 269 (457)
T ss_dssp CSHHHHHHHHHHHHHTCCEEECEEGGGGTCC
T ss_pred CcHHHHHHHHHHHHcCCeEEEEEchHHhEeC
Confidence 9888889999999999999999999987654
No 13
>3mpg_A Dihydroorotase, dhoase; hydrolase; 2.60A {Bacillus anthracis}
Probab=99.97 E-value=2.7e-31 Score=250.21 Aligned_cols=258 Identities=24% Similarity=0.304 Sum_probs=188.2
Q ss_pred cEEEECcEEEeCCC-ceeeeEEEeCCEEEEeeCCCCCCCCceEEeCCCCeeecccccccccccCCCCCCCChhhHHHHHH
Q 020079 54 KILIKGGTVVNAHH-QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQA 132 (331)
Q Consensus 54 ~~~i~n~~i~~~~~-~~~~~v~i~~g~I~~ig~~~~~~~~~~~id~~g~~v~PG~ID~H~H~~~~~~~~~~~~~~~~~~~ 132 (331)
+++|+|++|++... ..+++|+|+||+|++|++... +++.++||++|++|+|||||+|+|+..+ +....+++....+
T Consensus 2 ~~~i~~~~v~~~~~~~~~~~v~i~~g~I~~i~~~~~-~~~~~~id~~g~~v~PG~iD~H~H~~~~--~~~~~~~~~~~~~ 78 (428)
T 3mpg_A 2 NYLFKNGRYMNEEGKIVATDLLVQDGKIAKVAENIT-ADNAEVIDVNGKLIAPGLVDVHVHLREP--GGEHKETIETGTL 78 (428)
T ss_dssp EEEEEEEEEECSSSCEEEEEEEEESSBEEECCSSCC-CTTSEEEECTTCEEEECEEEEEECCCTT--TCTTTCCHHHHHH
T ss_pred cEEEEeeEEEeCCCCeeeeeEEEECCEEEEecCCCC-CCCCeEEECCCCEEeeCEEEEeeccCCC--CCCchhHHHHHHH
Confidence 58999999997443 578999999999999998654 3457899999999999999999999876 6667888989999
Q ss_pred HHHhCCceEEecCcCCCCC-cHHHHHHHHHHHhcc-ceeeccccccccC-CChhhHHHHHHHHHHhCCCeEEEEEecCCC
Q 020079 133 AALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKN-SCMDYGFHMAITK-WDEVVSDEMEVMVKEKGINSFKFFMAYKGS 209 (331)
Q Consensus 133 ~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~ 209 (331)
.++++|||+++++....+. ...+.++...+.... ...++..+..... ...+.+.++.++. +.|...+ .+++.
T Consensus 79 ~~~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~-~~G~~~~----~~~~~ 153 (428)
T 3mpg_A 79 AAAKGGFTTICAMPNTRPVPDCREHMEDLQNRIKEKAHVNVLPYGAITVRQAGSEMTDFETLK-ELGAFAF----TDDGV 153 (428)
T ss_dssp HHHHHTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHCSSEEEECEESBGGGCSSSBCCHHHHH-HTTCCCE----ECTTS
T ss_pred HHHhCCeEEEEeCCCCCCCCCcHHHHHHHHHHhcccCCcEEEEEeeEecCCCcchHHHHHHHH-HhCCEEE----ECCCc
Confidence 9999999999998654332 233333333332211 2222222221111 1122334456666 5677665 44556
Q ss_pred CcCCHHHHHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHHHhcCCCEEEE
Q 020079 210 FMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVV 289 (331)
Q Consensus 210 ~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~e~~~i~~~~~l~~~~g~~~~i~ 289 (331)
+..+++.++++++.|+++|+++.+|+++........ ...|......+...+|...|..++.+.+.+++..+.+++++
T Consensus 154 ~~~~~~~l~~~~~~a~~~g~~v~vH~~~~~~~~~~~---~~~g~~~~~~~~~~~p~~~e~~~v~~~~~la~~~g~~~~i~ 230 (428)
T 3mpg_A 154 GVQDASMMLAAMKRAAKLNMAVVAHCEENTLINKGC---VHEGKFSEKHGLNGIPSVCESVHIARDILLAEAADCHYHVC 230 (428)
T ss_dssp CCCCHHHHHHHHHHHHHTTCCEEECCCCGGGCTTCS---EETTHHHHHTTCCEECTHHHHHHHHHHHHHHHHHTCCEEEC
T ss_pred CCCCHHHHHHHHHHHHhcCCeEEEECCChhHhhhHH---hhcCccchhhCcCCCCHHHHHHHHHHHHHHHHHhCCCEEEE
Confidence 677899999999999999999999998765432100 00011111223344778888889999999999999999999
Q ss_pred eCCCHHHHHHHHHHHHcCCCEEEecCCccccch
Q 020079 290 HVMSMDAMEEIAKARKAGPNFLNTTIPLCDSCS 322 (331)
Q Consensus 290 H~~~~~~~~~i~~~~~~Gi~v~~~~~p~~~~~~ 322 (331)
|+++...++.++++|++|++|++++||||+.+.
T Consensus 231 H~s~~~~~~~i~~a~~~G~~v~~e~~p~~l~l~ 263 (428)
T 3mpg_A 231 HVSTKGSVRVIRDAKRAGIKVTAEVTPHHLVLC 263 (428)
T ss_dssp SCCCHHHHHHHHHHHHTTCCEEECBCHHHHHCC
T ss_pred eCCCHHHHHHHHHHHhcCCCEEEEEchHHhEEC
Confidence 999999999999999999999999999998654
No 14
>2z00_A Dihydroorotase; zinc binding protein, hydrolase, metal-binding, pyrimidine biosynthesis, structural genomics, NPPSFA; 2.42A {Thermus thermophilus}
Probab=99.96 E-value=1.2e-28 Score=231.60 Aligned_cols=250 Identities=26% Similarity=0.338 Sum_probs=176.4
Q ss_pred EEEECcEEEeCCC-ceeeeEEEeCCEEEEeeCCCCCCCCceEEeCCCCeeecccccccccccCCCCCCCChhhHHHHHHH
Q 020079 55 ILIKGGTVVNAHH-QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAA 133 (331)
Q Consensus 55 ~~i~n~~i~~~~~-~~~~~v~i~~g~I~~ig~~~~~~~~~~~id~~g~~v~PG~ID~H~H~~~~~~~~~~~~~~~~~~~~ 133 (331)
++|+|++|+++.. ..+++|+|+||+|++|++. ++.++||++|++|+|||||+|+|+..+ +..+.++++...+.
T Consensus 2 ~~i~~~~v~~~~~~~~~~~v~i~~g~I~~i~~~----~~~~~id~~g~~v~PG~iD~H~H~~~~--~~~~~~~~~~~~~~ 75 (426)
T 2z00_A 2 ILIRNVRLVDARGERGPADVLIGEGRILSLEGG----EAKQVVDGTGCFLAPGFLDLHAHLREP--GEEVKEDLFSGLLA 75 (426)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEETTEEEESBCC----CCSEEEECTTCEEEECEEEEEECCCTT--TCTTTCCHHHHHHH
T ss_pred EEEEeeEEECCCCceecceEEEECCEEEEEecC----CCceEEeCCCCEEecCEEEeccccCCC--CCCchHHHHHHHHH
Confidence 6899999999775 4688999999999999975 245799999999999999999999876 44456778888899
Q ss_pred HHhCCceEEecCcCCCCC-cHHHHHHHHHHHhccce-eecccccccc-CCChhhHHHHHHHHHHhCCCeEEEEEecCCCC
Q 020079 134 ALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSC-MDYGFHMAIT-KWDEVVSDEMEVMVKEKGINSFKFFMAYKGSF 210 (331)
Q Consensus 134 ~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~ 210 (331)
++++||||++|+....+. ...+.++...+...... +++....... ....+.+++++++. +.|...++ ++...
T Consensus 76 ~~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~g~~~i~----~~~~~ 150 (426)
T 2z00_A 76 AVRGGYTDLVSMPNTKPPVDTPEAVRALKEKAKALGLARLHPAAALTEKQEGKTLTPAGLLR-EAGAVLLT----DDGRT 150 (426)
T ss_dssp HHHTTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHTSSEECCEECSBGGGCSSSBCCHHHHH-HHTCCEEE----CTTSC
T ss_pred HHhCCccEEEecCCCCCCcChHHHHHHHHHHhcccCcccEEEEEEeecCCChhhHHHHHHHH-HcCCEEEE----CCCcC
Confidence 999999999998653321 22233333333222211 2222221111 01112234455555 45766553 34455
Q ss_pred cCCHHHHHHHHHHHHHcCCcEEEEcCCchhhHHHH----HHHHHcCCCCcccccccCChHHHHHHHHHHHHHHHh-----
Q 020079 211 MINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQ----KRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEF----- 281 (331)
Q Consensus 211 ~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~----~~~~~~G~~~~~~~~~~~~~~~e~~~i~~~~~l~~~----- 281 (331)
..+.+.++++++.|+++|+++.+|+++........ ......|. ..+|...|...+.+.+.++..
T Consensus 151 ~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~g~~~~~~g~-------~~~~~~~e~~~~~~~~~~a~~~~~~~ 223 (426)
T 2z00_A 151 NEDAGVLAAGLLMAAPLGLPVAVHAEDAGLRRNGVMNDGPLADLLGL-------PGNPPEAEAARIARDLEVLRYALRRS 223 (426)
T ss_dssp CCCHHHHHHHHHHHGGGTCCEEECCCCHHHHTTCSEECSHHHHHHTC-------CEECHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHhhCCEEEEeCCCHHHHhhhhhccCccchhccc-------ccCChHHHHHHHHHHHHHHhhccccc
Confidence 67899999999999999999999997654322100 01112222 235566676777788888887
Q ss_pred -cCCCEEEEeCCCHHHHHHHHHHHHcCCCEEEecCCccccch
Q 020079 282 -VNTPLYVVHVMSMDAMEEIAKARKAGPNFLNTTIPLCDSCS 322 (331)
Q Consensus 282 -~g~~~~i~H~~~~~~~~~i~~~~~~Gi~v~~~~~p~~~~~~ 322 (331)
.+.++++.|+++...++.+++++++|++|++++||+++.+.
T Consensus 224 ~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~~~~~ 265 (426)
T 2z00_A 224 PATPRLHVQHLSTKRGLELVREAKRAGLPVTAEATPHHLTLT 265 (426)
T ss_dssp SSCCCEEETTCCCHHHHHHHHHHHHTTCCEEEEECHHHHHCC
T ss_pred cCCCcEEEEeCCCHHHHHHHHHHHHcCCCEEEEEchHHhEeC
Confidence 89999999999888889999999999999999999987654
No 15
>1xrt_A Dihydroorotase, dhoase; amidohydrolase, metalloenzyme, pyrimidine; 1.61A {Aquifex aeolicus} SCOP: b.92.1.3 c.1.9.6 PDB: 1xrf_A 3d6n_A*
Probab=99.96 E-value=6e-28 Score=229.84 Aligned_cols=258 Identities=23% Similarity=0.226 Sum_probs=171.6
Q ss_pred CccEEEECcEEEeCCC--ceeeeEEEeCCEEEEeeCCCCCCCCceEEeCCCCeeecccccccccccCCCCCCCChhhHHH
Q 020079 52 SSKILIKGGTVVNAHH--QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFS 129 (331)
Q Consensus 52 ~~~~~i~n~~i~~~~~--~~~~~v~i~~g~I~~ig~~~~~~~~~~~id~~g~~v~PG~ID~H~H~~~~~~~~~~~~~~~~ 129 (331)
|++++|+|++|++++. ..+++|+|+||+|++|++... +++.++||++|++|+|||||+|+|+..+ +..+.++++.
T Consensus 46 mm~~~i~~~~v~~~~~~~~~~~~v~i~~g~I~~i~~~~~-~~~~~~iD~~g~~v~PGlID~H~H~~~~--~~~~~~~~~~ 122 (467)
T 1xrt_A 46 MLKLIVKNGYVIDPSQNLEGEFDILVENGKIKKIDKNIL-VPEAEIIDAKGLIVCPGFIDIHVHLRDP--GQTYKEDIES 122 (467)
T ss_dssp CCEEEEESCEEEEGGGTEEEECEEEEETTEEEEEESSCC-CSSEEEEECTTSEEEECEEEEEECCCTT--TCTTTCCHHH
T ss_pred eeeEEEEeeEEECCCCCceecceEEEECCEEEEecCCCC-CCCCcEEeCCCCEEccCEEEEeecccCC--CCCchhhHHH
Confidence 3468999999998764 468899999999999997543 2346899999999999999999999875 4455677888
Q ss_pred HHHHHHhCCceEEecCcCCCCC-cHHHHHHHHHHHhccc-eeecccccccc-CCChhhHHHHHHHHHHhCCCeEEEEEec
Q 020079 130 GQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNS-CMDYGFHMAIT-KWDEVVSDEMEVMVKEKGINSFKFFMAY 206 (331)
Q Consensus 130 ~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~ik~~~~~ 206 (331)
..+.++++||||++|+....+. ...+.++...+..... .+++....... ....+..++++++. +.|+..+ .+
T Consensus 123 ~~~~~~~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~l~-~~g~~~i----~~ 197 (467)
T 1xrt_A 123 GSRCAVAGGFTTIVCMPNTNPPIDNTTVVNYILQKSKSVGLCRVLPTGTITKGRKGKEIADFYSLK-EAGCVAF----TD 197 (467)
T ss_dssp HHHHHHHTTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHCSSEEEECBCSBGGGCSSSBCCHHHHH-HHTCCCB----CC
T ss_pred HHHHHHhCCeEEEEecCCCCCCCChHHHHHHHHHHhcccCcceEEEEeeecCCCCcccHHHHHHHH-HcCCEEE----Ec
Confidence 8889999999999998754322 2223333333322221 12322221111 01111233455555 3566554 33
Q ss_pred CCCCcCCHHHHHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHHHhcCCCE
Q 020079 207 KGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPL 286 (331)
Q Consensus 207 ~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~e~~~i~~~~~l~~~~g~~~ 286 (331)
++....+.+.++++++.|+++|+++.+|+++........ +.|.....+.....+...|...+.+.+.++...+.++
T Consensus 198 ~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~~~~~~~~~l----~~g~~~~~~g~~~~~~~~e~~~~~~~~~~~~~~g~~~ 273 (467)
T 1xrt_A 198 DGSPVMDSSVMRKALELASQLGVPIMDHCEDDKLAYGVI----NEGEVSALLGLSSRAPEAEEIQIARDGILAQRTGGHV 273 (467)
T ss_dssp TTSCCCCHHHHHHHHHHHHHHTCEEEECCCGGGGTC------------------------CHHHHHHHHHHHHHHHCCEE
T ss_pred CCCCCCCHHHHHHHHHHHHhcCCEEEEECCCHHHHHHHH----hcCccchhcccccCChHHHHHHHHHHHHHHHHhCCCE
Confidence 444567899999999999999999999987654332111 1121111111222344455566677778888889999
Q ss_pred EEEeCCCHHHHHHHHHHHHcCCCEEEecCCccccc
Q 020079 287 YVVHVMSMDAMEEIAKARKAGPNFLNTTIPLCDSC 321 (331)
Q Consensus 287 ~i~H~~~~~~~~~i~~~~~~Gi~v~~~~~p~~~~~ 321 (331)
|+.|++..+.++.+++++++|+++++++||+++.+
T Consensus 274 hi~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~~~~ 308 (467)
T 1xrt_A 274 HIQHVSTKLSLEIIEFFKEKGVKITCEVNPNHLLF 308 (467)
T ss_dssp EESCCCSHHHHHHHHHHHHTTCCEEEEECGGGGC-
T ss_pred EEEeCCCHHHHHHHHHHHhcCCcEEEeccHHHHhc
Confidence 99999988888999999999999999999998654
No 16
>3gip_A N-acyl-D-glutamate deacylase; amidohydrolase family, hydrolase; 1.50A {Bordetella bronchiseptica} PDB: 3giq_A*
Probab=99.95 E-value=3e-27 Score=225.72 Aligned_cols=239 Identities=21% Similarity=0.191 Sum_probs=172.8
Q ss_pred CCccEEEECcEEEeCCC--ceeeeEEEeCCEEEEeeCCCCCCCCceEEeCCCCeeecccccccccccCCCCCCCChhhHH
Q 020079 51 SSSKILIKGGTVVNAHH--QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFF 128 (331)
Q Consensus 51 ~~~~~~i~n~~i~~~~~--~~~~~v~i~~g~I~~ig~~~~~~~~~~~id~~g~~v~PG~ID~H~H~~~~~~~~~~~~~~~ 128 (331)
|+.+++|+|++|++++. ...++|+|+||+|++|++... +++.++||++|++|+|||||+|+|+...... .+
T Consensus 5 ~~~~~~i~~~~v~~~~~~~~~~~~v~i~~g~I~~i~~~~~-~~~~~~id~~g~~v~PG~iD~H~H~~~~~~~--~~---- 77 (480)
T 3gip_A 5 EKLDFKITGGWIIDGTGAPRRRADLGVRDGRIAAIGELGA-HPARHAWDASGKIVAPGFIDVHGHDDLMFVE--KP---- 77 (480)
T ss_dssp CCEEEEEESSEECCSSSCCCEECEEEEETTEEEEEECCTT-SCEEEEEECTTSEEEECEEESSCCCTTHHHH--ST----
T ss_pred ccCCEEEECcEEECCCCCeeeeeEEEEECCEEEEecCCCC-CCCCeEEECCCCEEccCEEeccccccccccC--Ch----
Confidence 55789999999999875 478999999999999998643 3457899999999999999999998754111 11
Q ss_pred HHHHHHHhCCceEEecC---------cCCCCC-cH---------HHHHHHHHHHh--ccceeecccccccc---------
Q 020079 129 SGQAAALAGGTTMHIDF---------VIPING-SL---------TAGFEAYEKKA--KNSCMDYGFHMAIT--------- 178 (331)
Q Consensus 129 ~~~~~~l~~GvTtv~d~---------~~~~~~-~~---------~~~~~~~~~~~--~~~~~~~~~~~~~~--------- 178 (331)
+....+++||||+++. ....+. .. ++.+..+.+.. ....+++.++.+..
T Consensus 78 -~~~~~~~~G~Tt~~~g~cG~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~r~~~~g~ 156 (480)
T 3gip_A 78 -DLRWKTSQGITTVVVGNCGVSAAPAPLPGNTAAALALLGETPLFADVPAYFAALDAQRPMINVAALVGHANLRLAAMRD 156 (480)
T ss_dssp -TCHHHHTTTEEEEEECCTTCCSCSCCCTTCCCGGGGGTCSSCCCSSHHHHHHHHHHSCCSSEEEEEEEHHHHHHHHCSS
T ss_pred -hHHHHhcCCeeEEEecCCCcCCCCCCcccchhhhhhhhccCccccCHHHHHHHHHhCCCCceEEEccccHHHHHHhcCC
Confidence 1234589999999983 111100 00 01122222221 12344544432211
Q ss_pred ---CCChhhHHHHHHHHH---HhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHHHcC
Q 020079 179 ---KWDEVVSDEMEVMVK---EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELG 252 (331)
Q Consensus 179 ---~~~~~~~~~~~~~~~---~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~~~G 252 (331)
..+.+.++++.++.+ +.|+.+++.++.+......+.+++.++++.++++|.++.+|+++....
T Consensus 157 ~~~~~~~~~l~~m~~l~~~~~~~Ga~g~~~~~~y~p~~~~~~~el~~~~~~a~~~g~~v~~H~~~~~~~----------- 225 (480)
T 3gip_A 157 PQAAPTAAEQQAMQDMLQAALEAGAVGFSTGLAYQPGAVAQAAELEGLARVAAERRRLHTSHIRNEADG----------- 225 (480)
T ss_dssp TTSCCCHHHHHHHHHHHHHHHHHTCCEEEEETTSTTGGGCCHHHHHHHHHHHHHTTCEEEEECSCSSTT-----------
T ss_pred cCCCCCHHHHHHHHHHHHHHHHCCCcEEeecCccCCcccCCHHHHHHHHHHHHHcCCEEEEEecCcccc-----------
Confidence 123455666666653 479999998876654445688999999999999999999999764321
Q ss_pred CCCcccccccCChHHHHHHHHHHHHHHHhcCCCEEEEeCC---------CHHHHHHHHHHHHcCCCEEEecCCccccchh
Q 020079 253 ITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVM---------SMDAMEEIAKARKAGPNFLNTTIPLCDSCSN 323 (331)
Q Consensus 253 ~~~~~~~~~~~~~~~e~~~i~~~~~l~~~~g~~~~i~H~~---------~~~~~~~i~~~~~~Gi~v~~~~~p~~~~~~~ 323 (331)
+..++.+.+.+++..|+++|++|++ +.+.++.+++++++|++|++++|||+..++.
T Consensus 226 ---------------~~~a~~e~i~la~~~g~~v~i~H~s~~~~~~~~~~~~~l~~i~~a~~~G~~Vt~e~~p~~~~~t~ 290 (480)
T 3gip_A 226 ---------------VEAAVEEVLAIGRGTGCATVVSHHKCMMPQNWGRSRATLANIDRAREQGVEVALDIYPYPGSSTI 290 (480)
T ss_dssp ---------------HHHHHHHHHHHHHHHCCEEEETTCCCCSGGGTTTHHHHHHHHHHHHHTTCCEEEEECSCSCEEEE
T ss_pred ---------------HHHHHHHHHHHHHHhCCCEEEEEEeccCccchhhHHHHHHHHHHHHHcCCceEEEeeccccCcch
Confidence 1356778889999999999999998 4788999999999999999999999998854
No 17
>2gwn_A Dihydroorotase; zinc-binding prote structural genomics, PSI, protein structure initiative, MID center for structural genomics, MCSG; HET: KCX GOL; 1.85A {Porphyromonas gingivalis}
Probab=99.95 E-value=8.6e-27 Score=220.97 Aligned_cols=259 Identities=19% Similarity=0.235 Sum_probs=183.3
Q ss_pred ccEEEECcEEEeCCCceeeeEEEeCCEEEEeeC-CCCC---CCCceEEeCCCCeeecccccccccccCCCCCCCChhhHH
Q 020079 53 SKILIKGGTVVNAHHQQIADVYVEDGIVVAVQP-NINV---GDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFF 128 (331)
Q Consensus 53 ~~~~i~n~~i~~~~~~~~~~v~i~~g~I~~ig~-~~~~---~~~~~~id~~g~~v~PG~ID~H~H~~~~~~~~~~~~~~~ 128 (331)
++++|+|++|++++...+++|+|+||+|++|++ .... +++.++||++|++|+|||||+|+|+..+ +..++++++
T Consensus 4 m~~li~~~~v~~~~~~~~~~v~i~~g~I~~i~~~~~~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~--~~~~~e~~~ 81 (452)
T 2gwn_A 4 MKILLRNALITNEGKTFPGSVMIDGAFISRIIEGELPADDNLSADEVIECSGLRLFPGCIDDQVHFREP--GLTHKATIA 81 (452)
T ss_dssp SEEEEEEEEEEETTEEEEEEEEEETTEEEEEEESCCCTTCCTTCSEEEECTTCEEEECEEEEEECCCTT--TCTTTCCHH
T ss_pred ccEEEECeEEECCCceeeeeEEEECCEEEEEecCCCccccCCCCCeEEeCCCCEEecCEEeeccccCCC--CCCcHHHHH
Confidence 468999999999876678899999999999997 5332 2346899999999999999999999876 555778888
Q ss_pred HHHHHHHhCCceEEecCcCCCCC-cHHHHHHHHHHHh-ccceeeccccccccCCChhhHHHHHHHHHHhCCCeEEEEEec
Q 020079 129 SGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAY 206 (331)
Q Consensus 129 ~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~ 206 (331)
...+.++++||||++|+....+. ...+.++...+.. ....+++.++....... .+++.++. ..|..++|.+++.
T Consensus 82 ~~~~~~~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~~-~~g~~g~k~~~~~ 157 (452)
T 2gwn_A 82 SESRAAVAGGVTSFMDMPNTNPPTTMWERLLEKRQIGADTAWANYGFFFGGTNDN---IDEIKRVD-KHLVPGLKLFLGS 157 (452)
T ss_dssp HHHHHHHHTTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHCSSEEEECEECCSSC---HHHHHTCC-TTSCSCEEEESSS
T ss_pred HHHHHHHhCCeEEEEcCCCCCCCCChHHHHHHHHHHhhccCcccEEEEEeecCCC---HHHHHHHH-HcCCCEEEEEecc
Confidence 88999999999999998754332 3334444433332 22455555554443322 23454444 4578889988764
Q ss_pred CC--CCcCCHHHHHHHHHHHHHcCCcEEEEcCCchhhHHHHHHH-HHcCC-CCcccccccCChHHHHHHHHHHHHHHHhc
Q 020079 207 KG--SFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRM-IELGI-TGPEGHALSRPPLLEGEATTRAIRLAEFV 282 (331)
Q Consensus 207 ~~--~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~-~~~G~-~~~~~~~~~~~~~~e~~~i~~~~~l~~~~ 282 (331)
.. ....+.+.+++.++ +.+.++..|+++...+......+ ...|. ..+..|...+|+..|...+++.+++++++
T Consensus 158 ~~~~~~~~~~~~~~~~~~---~~~~~~~~h~~~~~~~~~~~~~~~~~~G~~~~~~~h~~~~~~~~~~~~l~~~~~la~~~ 234 (452)
T 2gwn_A 158 STGNMLVDNKETLEKIFG---ECDLLIATHCEKEEIIRANKEHYKAKYGNDLDIHFHPLIRSEEACYRSSAEAVELAERM 234 (452)
T ss_dssp CCGGGBCCCHHHHHHHHH---HCCSCEEEECCCHHHHHHHHHHHHHHHCSCCCGGGHHHHSCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcccCCHHHHHHHHH---HcCCEEEEcCCCHHHHHhHHhhhhhhcCcccchhhccccCChHHHHHHHHHHHHHHHHh
Confidence 31 12235666665544 45889999998766554443332 34453 45555656678888888999999999999
Q ss_pred CCCEEEEeCCCHHHHHHHHH---HHHcCCCEEEecCCccccch
Q 020079 283 NTPLYVVHVMSMDAMEEIAK---ARKAGPNFLNTTIPLCDSCS 322 (331)
Q Consensus 283 g~~~~i~H~~~~~~~~~i~~---~~~~Gi~v~~~~~p~~~~~~ 322 (331)
|.++++.|+++...++.+++ +++. +|+++++||++.+.
T Consensus 235 g~~v~i~H~~~~~~~~~~~~~~a~~~~--~v~~~~~~h~~~l~ 275 (452)
T 2gwn_A 235 NARLHILHLSTEKELSLFRNDIPTAQK--RITSEVCVHHLWFS 275 (452)
T ss_dssp TCCEEECCCCCTGGGGGSCCSSCGGGC--SEEEEEEHHHHHCC
T ss_pred CCCEEEEeCCCHHHHHHHHHhhcccCC--CeEEEEchHHhhcC
Confidence 99999999987766666666 2443 68999999987643
No 18
>3gnh_A L-lysine, L-arginine carboxypeptidase CC2672; N-methyl phosphonate derivative of L- arginine, hydrolase; HET: KCX M3R; 1.70A {Caulobacter crescentus CB15} PDB: 3mtw_A*
Probab=99.92 E-value=1.9e-24 Score=201.39 Aligned_cols=244 Identities=16% Similarity=0.105 Sum_probs=159.3
Q ss_pred cEEEECcEEEeCCC---ceeeeEEEeCCEEEEeeCCC-CCCCCceEEeCCCCeeecccccccccccCCCCCC------CC
Q 020079 54 KILIKGGTVVNAHH---QQIADVYVEDGIVVAVQPNI-NVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGS------ET 123 (331)
Q Consensus 54 ~~~i~n~~i~~~~~---~~~~~v~i~~g~I~~ig~~~-~~~~~~~~id~~g~~v~PG~ID~H~H~~~~~~~~------~~ 123 (331)
+++|+|++|++++. .++++|+|+||||++|++.. ..+++.++||++|++|+|||||+|+|+....... .+
T Consensus 3 ~~~i~~~~i~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~~~~~~~viD~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~ 82 (403)
T 3gnh_A 3 IKAVSAARLLDVASGKYVDNPLVIVTDGRITSIGKKGDAVPAGATAVDLPGVTLLPGLIDMHVHLDSLAEVGGYNSLEYS 82 (403)
T ss_dssp EEEEEEEEEEETTTTEEEESEEEEEETTEEEEEEETTSCCCTTCEEEEEEEEEEEECEEEEEECTTCCTTCCSGGGGGSC
T ss_pred cEEEEccEEEECCCCcccCCCEEEEECCEEEEEeCCCCCCCCCCeEEECCCCEEcCCeEeeeEccccCcccchhhhhcCC
Confidence 48999999999875 36899999999999999865 3345679999999999999999999998652111 11
Q ss_pred hhhH----HHHHHHHHhCCceEEecCcCCCCCcHHHHHHHHHHHh----ccceeecc------ccc--------------
Q 020079 124 IDDF----FSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKA----KNSCMDYG------FHM-------------- 175 (331)
Q Consensus 124 ~~~~----~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~----~~~~~~~~------~~~-------------- 175 (331)
++.. ....+.++++||||++|++.... ....++...+.+ ++...... .+.
T Consensus 83 ~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~--~~~~~~~~~~~g~~~gpr~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 160 (403)
T 3gnh_A 83 DRFWSVVQTANAKKTLEAGFTTVRNVGAADY--DDVGLREAIDAGYVPGPRIVTAAISFGATGGHCDSTFFPPSMDQKNP 160 (403)
T ss_dssp HHHHHHHHHHHHHHHHHTTEEEEEECCCSTT--HHHHHHHHHHTTSSCCCEEEECCSCEESTTSTTSCCSSCGGGCCCCT
T ss_pred HHHHHHHHHHHHHHHHhCCeeEEEeCCCCcc--ccHHHHHHHHCCCCCCCeEEecCcccccCCCCcccccCchhhcccCC
Confidence 2222 12346789999999999976432 222233333332 23211111 010
Q ss_pred cccCCChhhHHHHHHHHHHhCCCeEEEEEe--------cCCCCcCCHHHHHHHHHHHHHcCCcEEEEcCCchhhHHHHHH
Q 020079 176 AITKWDEVVSDEMEVMVKEKGINSFKFFMA--------YKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKR 247 (331)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~--------~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~ 247 (331)
......++..+.++++. +.|.+.+|++.. +.+...+++++++++++.|+++|+++++|+.+...+. .
T Consensus 161 ~~~~~~~~~~~~~~~~~-~~g~~~ik~~~~G~~~~~~~~~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~~~~~i~----~ 235 (403)
T 3gnh_A 161 FNSDSPDEARKAVRTLK-KYGAQVIKICATGGVFSRGNEPGQQQLTYEEMKAVVDEAHMAGIKVAAHAHGASGIR----E 235 (403)
T ss_dssp TCCCSHHHHHHHHHHHH-HTTCSEEEEECBCCSSSSSCCTTCBCSCHHHHHHHHHHHHHTTCEEEEEECSHHHHH----H
T ss_pred cccCCHHHHHHHHHHHH-HcCCCEEEEeecCCcCCCCCCCccccCCHHHHHHHHHHHHHCCCEEEEEeCCHHHHH----H
Confidence 01122345566677766 679999999874 2345678999999999999999999999987665443 3
Q ss_pred HHHcCCCCcccccccCChHHHHHHHHHHHHHHHhcCCCEEEEeCCCH--------------------------HHHHHHH
Q 020079 248 MIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSM--------------------------DAMEEIA 301 (331)
Q Consensus 248 ~~~~G~~~~~~~~~~~~~~~e~~~i~~~~~l~~~~g~~~~i~H~~~~--------------------------~~~~~i~ 301 (331)
..+.|..... |+... -++.++++.+.|+. ++++... .....++
T Consensus 236 ~~~~g~~~i~-H~~~~--------~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (403)
T 3gnh_A 236 AVRAGVDTIE-HASLV--------DDEGIKLAVQKGAY--FSMDIYNTDYTQAEGKKNGVLEDNLRKDRDIGELQRENFR 304 (403)
T ss_dssp HHHTTCSEEE-ECTTC--------CHHHHHHHHHHTCE--EECCCSTHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCEEe-cCCcC--------CHHHHHHHHHCCCE--EEeeechhhhhhhhccccCCCHHHHHHHHHHHHHHHHHHH
Confidence 3456654332 22111 12345666667765 4443210 1123578
Q ss_pred HHHHcCCCEEEecC
Q 020079 302 KARKAGPNFLNTTI 315 (331)
Q Consensus 302 ~~~~~Gi~v~~~~~ 315 (331)
.+.++|++|..++.
T Consensus 305 ~~~~~Gv~v~~gTD 318 (403)
T 3gnh_A 305 KALKAGVKMVYGTD 318 (403)
T ss_dssp HHHHHTCEEECCCC
T ss_pred HHHHCCCeEEEecC
Confidence 89999999987654
No 19
>3h4u_A Amidohydrolase; signature of Zn ligands, structural genomics, NYSGXRC, target 9236E, PSI-2, protein structure initiative; 2.20A {Unidentified} PDB: 3hpa_A
Probab=99.92 E-value=8.3e-24 Score=201.66 Aligned_cols=258 Identities=19% Similarity=0.225 Sum_probs=167.9
Q ss_pred CCccEEEECcEEE-eCC--C--ceeeeEEEeCCEEEEeeCCCCCC-CCceEEeCCCCeeecccccccccccCCCCCC---
Q 020079 51 SSSKILIKGGTVV-NAH--H--QQIADVYVEDGIVVAVQPNINVG-DDVKVLDATGKFVMPGGIDPHTHLAMEFMGS--- 121 (331)
Q Consensus 51 ~~~~~~i~n~~i~-~~~--~--~~~~~v~i~~g~I~~ig~~~~~~-~~~~~id~~g~~v~PG~ID~H~H~~~~~~~~--- 121 (331)
+|.+++|+|++++ +++ . .++++|+|+||+|++|++....+ ++.++||++|++|+|||||+|+|+.+.....
T Consensus 27 ~m~~~li~n~~vv~t~d~~~~~~~~~~V~I~~g~I~~Vg~~~~~~~~~~~viD~~g~~v~PGlID~H~Hl~~~~~rg~~~ 106 (479)
T 3h4u_A 27 RPKTLLVKHADVLVTMDDTRRELRDAGLYIEDNRIVAVGPSAELPETADEVLDLRGHLVIPGLVNTHHHMYQSLTRAVPA 106 (479)
T ss_dssp --CEEEEEEEEEEECCCTTCCEEEEEEEEEETTEEEEEEEGGGSCSCCSEEEECTTEEEEECEEECCCCGGGGGSCSCTT
T ss_pred hhhhheeECCeEEEeeCCCCceecccEEEEECCEEEEEeCCcccCCCCCeEEeCCCCEEecceeecccccchhhhccccc
Confidence 4678999999966 333 2 46899999999999999865432 4678999999999999999999998753211
Q ss_pred -------------------CChhhHHH----HHHHHHhCCceEEecCcCCCCC--cHHHHHHHHHHHhccceeecccccc
Q 020079 122 -------------------ETIDDFFS----GQAAALAGGTTMHIDFVIPING--SLTAGFEAYEKKAKNSCMDYGFHMA 176 (331)
Q Consensus 122 -------------------~~~~~~~~----~~~~~l~~GvTtv~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (331)
.++++++. ....++++||||+.|+...... .....++...+.+.+..........
T Consensus 107 ~~~~~l~~~l~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~g~r~~~~~~~~~~ 186 (479)
T 3h4u_A 107 AQNAELFGWLTNLYKIWAHLTPEMIEVSTLTAMAELLQSGCTTSSDHLYIYPNGSRLDDSIGAAQRIGMRFHASRGAMSV 186 (479)
T ss_dssp TTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTTEEEEECCBCCCCTTCCHHHHHHHHHHHTCEEEEEEEECC-
T ss_pred cCCCCHHHHHHHhhhhhhhCCHHHHHHHHHHHHHHHHhCCeEEEEECccccCCcchHHHHHHHHHHcCCEEEEEeeeccc
Confidence 23344433 3455788999999998543222 3445566666666553332211110
Q ss_pred -----------ccCCChhhHHHHHHHHHHh-C---CCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEc-CCchh
Q 020079 177 -----------ITKWDEVVSDEMEVMVKEK-G---INSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA-ENGDA 240 (331)
Q Consensus 177 -----------~~~~~~~~~~~~~~~~~~~-g---~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~-e~~~~ 240 (331)
.....++..++..++.++. + ...++..+.++..+.++++.++++++.|+++|+++++|+ ++..+
T Consensus 187 ~~~~g~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~e~~~~ 266 (479)
T 3h4u_A 187 GQRDGGLPPDSVVEREPDILRDTQRLIETYHDEGRYAMLRVVVAPCSPFSVSRDLMRDAAVLAREYGVSLHTHLAENVND 266 (479)
T ss_dssp ---------------CHHHHHHHHHHHHHHCCCSTTCSEEEEEEESCTTSSCHHHHHHHHHHHHHHTCEEEEEESCSHHH
T ss_pred ccccccCCcccccccHHHHHHHHHHHHHHhhccCCCCceEEEEecCCCCCCCHHHHHHHHHHHHhcCCCEEEEeCCCHHH
Confidence 0111234455566665332 2 245777788888888999999999999999999999997 55544
Q ss_pred hHHH--------HHHHHHcCCCCcccccccCChHHHHHHHHHHHHHHHhcCCCEEEEeCCCH-----HHHHHHHHHHHcC
Q 020079 241 VFEG--------QKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSM-----DAMEEIAKARKAG 307 (331)
Q Consensus 241 ~~~~--------~~~~~~~G~~~~~~~~~~~~~~~e~~~i~~~~~l~~~~g~~~~i~H~~~~-----~~~~~i~~~~~~G 307 (331)
.... .+.+.+.|++++.....+..... .+.++++.+.|+. ++||+.. .....++++.++|
T Consensus 267 ~~~~~~~~g~~~~~~~~~~g~~~~~~~i~H~~~~~-----~~~~~~l~~~g~~--v~~~p~s~~~l~~~~~~~~~~~~~G 339 (479)
T 3h4u_A 267 IAYSREKFGMTPAEYAEDLGWVGHDVWHAHCVQLD-----DAGIGLFARTGTG--VAHCPCSNMRLASGIAPVKKMRLAG 339 (479)
T ss_dssp HHC-------CHHHHHHHTTCCSTTEEEEECTTCC-----HHHHHHHHHHTCE--EEECHHHHHHTTCCCCCHHHHHHTT
T ss_pred HHHHHHHcCCCHHHHHHHcCCCCCCeEEEEecCCC-----HHHHHHHHHcCCe--EEEChhHhhhcCCCCCCHHHHHHCC
Confidence 4332 24567888877653222222111 1345666666765 5555432 1234688899999
Q ss_pred CCEEEecC
Q 020079 308 PNFLNTTI 315 (331)
Q Consensus 308 i~v~~~~~ 315 (331)
++++.++.
T Consensus 340 v~v~lgtD 347 (479)
T 3h4u_A 340 VPVGLGVD 347 (479)
T ss_dssp CCEEECCC
T ss_pred CeEEEeCC
Confidence 99988765
No 20
>3feq_A Putative amidohydrolase; unknown source, sargasso SEA, structural GEN protein structure initiative, PSI; 2.63A {Unidentified} PDB: 3lwy_A* 3n2c_A*
Probab=99.92 E-value=2.6e-24 Score=201.69 Aligned_cols=249 Identities=17% Similarity=0.098 Sum_probs=158.8
Q ss_pred CccEEEECcEEEeCCC---ceeeeEEEeCCEEEEeeCCCCCCCCceEEeCCCCeeecccccccccccCCCCC-----CCC
Q 020079 52 SSKILIKGGTVVNAHH---QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMG-----SET 123 (331)
Q Consensus 52 ~~~~~i~n~~i~~~~~---~~~~~v~i~~g~I~~ig~~~~~~~~~~~id~~g~~v~PG~ID~H~H~~~~~~~-----~~~ 123 (331)
|.+++|+|++|++++. .++++|+|+||||++|++....+++.++||++|++|+|||||+|+|+...... ...
T Consensus 3 ~~~~~i~n~~v~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~~~~~~viD~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~ 82 (423)
T 3feq_A 3 LTITVLQGGNVLDLERGVLLEHHHVVIDGERIVEVTDRPVDLPNAQAIDVRGKTVMPGFIDCHVHVLASNANLGVNATQP 82 (423)
T ss_dssp -CEEEEEEEEEEETTTTEEEEEEEEEEETTEEEEEECSCCCCSSCEEEECTTCEEEECEEEEEECTTCCSSCHHHHHHSC
T ss_pred ceEEEEEccEEEeCCCCcccCCceEEEECCEEEEecCCCCCCCCCeEEeCCCCEECCCeeeeEeeecccCCChhhhhcCC
Confidence 4578999999999874 35789999999999999865445577999999999999999999999876221 011
Q ss_pred hhhH----HHHHHHHHhCCceEEecCcCCCCCcHHHHHHHHHHHhccceeeccc------c-------------------
Q 020079 124 IDDF----FSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGF------H------------------- 174 (331)
Q Consensus 124 ~~~~----~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~------------------- 174 (331)
++.. ....+.++++||||++|++.... ...+.++.....+++....... +
T Consensus 83 ~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~-~l~~~~~~~~~~g~r~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 161 (423)
T 3feq_A 83 NILAAIRSLPILDAMLSRGFTSVRDAGGADW-SLMQAVETGLVSGPRIFPSGKALSQTGGHGDFRPRGDLLEPCSCCFRT 161 (423)
T ss_dssp HHHHHHTHHHHHHHHHHTTEEEEEECSSCCH-HHHHHHHTTSSCSCEEECCCSEEECTTSTTCCCCC---CCCCCSSCCT
T ss_pred HHHHHHHHHHHHHHHHhCCeEEEEeCCCchH-HHHHHHHcCCCCCCeEEecCcccccCCCCccccccccccccccccccc
Confidence 2222 23445679999999999875331 2222222221122221111000 0
Q ss_pred ---ccccCCChhhHHHHHHHHHHhCCCeEEEEEe--------cCCCCcCCHHHHHHHHHHHHHcCCcEEEEcCCchhhHH
Q 020079 175 ---MAITKWDEVVSDEMEVMVKEKGINSFKFFMA--------YKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFE 243 (331)
Q Consensus 175 ---~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~--------~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~ 243 (331)
.......++..+.++++. +.|.+.+|++.. +++...++++.++++++.|+++|+++++|+.+...+..
T Consensus 162 ~~~~~~~~~~~~~~~~v~~~~-~~g~~~ik~~~~g~~~~~~~p~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~~~~~i~~ 240 (423)
T 3feq_A 162 GAIARVVDGVEGVRLAVREEI-QKGATQIKIMASGGVASPTDPIANTQYSEDEIRAIVDEAEAANTYVMAHAYTGRAIAR 240 (423)
T ss_dssp TCSEEECCSHHHHHHHHHHHH-HTTCSSEEEECBCCSSSSSCCTTSBCSCHHHHHHHHHHHHHTTCCEEEEEEEHHHHHH
T ss_pred cccceecCCHHHHHHHHHHHH-HcCCCEEEEeccCCcCCCCCCcccccCCHHHHHHHHHHHHHCCCeEEEEeCChHHHHH
Confidence 001122244556666666 679999999875 34455789999999999999999999999875554433
Q ss_pred HHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHHHhcCCCEEE---------------EeCCC---------HHHHHH
Q 020079 244 GQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYV---------------VHVMS---------MDAMEE 299 (331)
Q Consensus 244 ~~~~~~~~G~~~~~~~~~~~~~~~e~~~i~~~~~l~~~~g~~~~i---------------~H~~~---------~~~~~~ 299 (331)
. .+.|.....+ +.... ++.++++.+.|+.++- .+++. ......
T Consensus 241 ~----l~~g~~~i~H-~~~~~--------~~~~~~l~~~gv~~~pt~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 307 (423)
T 3feq_A 241 A----VRCGVRTIEH-GNLVD--------EAAAKLMHEHGAFVVPTLVTYDALAKHGAEFGMPPESVAKVASVQQKGRES 307 (423)
T ss_dssp H----HHHTCCEEEE-EEECC--------HHHHHHHHHHTCEEECCTHHHHHHHHHTGGGTCCTTTSSTHHHHHHHHHHH
T ss_pred H----HHcCCCEEec-cCcCC--------HHHHHHHHHCCCccccchHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHH
Confidence 3 3456543332 22211 2234555556654311 12222 125567
Q ss_pred HHHHHHcCCCEEEecC
Q 020079 300 IAKARKAGPNFLNTTI 315 (331)
Q Consensus 300 i~~~~~~Gi~v~~~~~ 315 (331)
++.+.++|++|..++.
T Consensus 308 ~~~l~~~Gv~v~~gTD 323 (423)
T 3feq_A 308 LEIYANAGVKMGFGSD 323 (423)
T ss_dssp HHHHHHHTCCBCCCCC
T ss_pred HHHHHHCCCEEEECCC
Confidence 8999999999987655
No 21
>4f0r_A 5-methylthioadenosine/S-adenosylhomocysteine DEAM; structural genomics, PSI-biology; HET: MSE MTA; 1.80A {Chromobacterium violaceum} PDB: 4f0s_A*
Probab=99.92 E-value=2.5e-24 Score=203.46 Aligned_cols=255 Identities=19% Similarity=0.189 Sum_probs=165.7
Q ss_pred CCCccEEEECcEEEeCCC----ceeeeEEEeCCEEEEeeCCCCC--CCCceEEeCCCCeeecccccccccccCCCC-C--
Q 020079 50 QSSSKILIKGGTVVNAHH----QQIADVYVEDGIVVAVQPNINV--GDDVKVLDATGKFVMPGGIDPHTHLAMEFM-G-- 120 (331)
Q Consensus 50 ~~~~~~~i~n~~i~~~~~----~~~~~v~i~~g~I~~ig~~~~~--~~~~~~id~~g~~v~PG~ID~H~H~~~~~~-~-- 120 (331)
.|+.+++|+|++|+++++ .++++|+|+||+|++||+.... .++.++||++|++|+|||||+|+|+.+... +
T Consensus 3 ~~~~~~li~~~~v~~~~~~~~~~~~~~v~i~~g~I~~vg~~~~~~~~~~~~viD~~g~~v~PGlID~H~Hl~~~~~~g~~ 82 (447)
T 4f0r_A 3 QSRYEKIISARWIITVETDGEVLENHAIAIRDGKIAAIIPAADAAGLEADERLELPDHVLMPGLINLHGHSAMSLLRGLA 82 (447)
T ss_dssp --CEEEEEEEEEEECCSSTTCEEEEEEEEEETTEEEEEEEHHHHTTSCEEEEEEEEEEEEEECEEEEEECGGGGGGTTSS
T ss_pred CCcccEEEECCEEEeeCCCCcEeeceEEEEECCEEEEEecccccccCCCCeEEeCCCcEEeeCccchhhChhhHhhccCC
Confidence 356789999999998653 4689999999999999985432 245789999999999999999999965421 1
Q ss_pred -------------------CCChhhHHH----HHHHHHhCCceEEecCcCCCCCcHHHHHHHHHHHhccceeeccccc--
Q 020079 121 -------------------SETIDDFFS----GQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHM-- 175 (331)
Q Consensus 121 -------------------~~~~~~~~~----~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 175 (331)
..++++.+. ....++++||||++|+... .....+...+.+.+..+......
T Consensus 83 ~~~~~~~wl~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~----~~~~~~~~~~~g~r~~~~~~~~~~~ 158 (447)
T 4f0r_A 83 DDKALMDWLTNYIWPTEGKHVHDDFVFDGSLLAMGEMIRGGTTTINDMYFY----NAAVARAGLASGMRTFVGCSILEFP 158 (447)
T ss_dssp CSSCHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEEECBSC----HHHHHHHHHHHTCEEEEEEEECSSC
T ss_pred CCCCHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHhCCcEEEEEcccC----HHHHHHHHHHcCCeEEEEchhcCCC
Confidence 123444433 3445788999999998432 23344445555555433332221
Q ss_pred -cccCCChhhHHHHHHHHHH-hCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEc-CCchhhHHHH-------
Q 020079 176 -AITKWDEVVSDEMEVMVKE-KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA-ENGDAVFEGQ------- 245 (331)
Q Consensus 176 -~~~~~~~~~~~~~~~~~~~-~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~-e~~~~~~~~~------- 245 (331)
......++.++++.++.++ .|...+++.+.++..+.++++.++++++.|+++|+++++|+ ++..++....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~iH~~~~~~~~~~~~~~~g~~~ 238 (447)
T 4f0r_A 159 TNYASNADDYIAKGMAERSQFLGEDLLTFTLAPHAPYTVSDDTFRKVVTLAEQEDMLIHCHIHETADEVNNSVKEHGQRP 238 (447)
T ss_dssp CSSCSSHHHHHHHHHHHHHTTTTCTTEEEEEEECCGGGSCHHHHHHHHHHHHHHTCCEEEEESCCHHHHHHHHHHHSSCH
T ss_pred cccccCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCCCCHHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCH
Confidence 1111223445555565533 36677888888888888999999999999999999999997 5545554432
Q ss_pred -HHHHHcCCCCcccccccCChHHHHHHHHHHHHHHHhcCCCEEEEeCCCH-----HHHHHHHHHHHcCCCEEEecC
Q 020079 246 -KRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSM-----DAMEEIAKARKAGPNFLNTTI 315 (331)
Q Consensus 246 -~~~~~~G~~~~~~~~~~~~~~~e~~~i~~~~~l~~~~g~~~~i~H~~~~-----~~~~~i~~~~~~Gi~v~~~~~ 315 (331)
+.+.+.|+.++.....+..... .+.++++.+.|+. +++++.. .....++++.+.|+++..++.
T Consensus 239 i~~~~~~g~~~~~~~~~H~~~~~-----~~~~~~~~~~g~~--~~~~p~~~~~~~~~~~~~~~~~~~Gv~v~lgTD 307 (447)
T 4f0r_A 239 LARLQRLGLLSPRLVAAHMVHLN-----DAEVELAARHGLS--TAHNPASNMKLASGISPVSKLMDAGVAVGIGTD 307 (447)
T ss_dssp HHHHHHHTCCSTTEEEEECCSCC-----HHHHHHHHHHTCE--EEECHHHHHHTTCCCCCHHHHHHTTCEEEECCC
T ss_pred HHHHHHcCCCCCCcEEEeccCCC-----HHHHHHHHHcCCE--EEECchhhhhcCCCCCcHHHHHHCCCcEEEeCC
Confidence 3456677766553332222111 1234555566664 4454321 223457788889998887654
No 22
>3lnp_A Amidohydrolase family protein OLEI01672_1_465; TIM barrel, beta-fold, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.10A {Oleispira antarctica}
Probab=99.92 E-value=1.2e-23 Score=199.94 Aligned_cols=254 Identities=16% Similarity=0.148 Sum_probs=165.9
Q ss_pred CCccEEEECcEEEeCCC----------ceeeeEEEeCCEEEEeeCCCC-CCCCceEEeCCCCeeecccccccccccCCCC
Q 020079 51 SSSKILIKGGTVVNAHH----------QQIADVYVEDGIVVAVQPNIN-VGDDVKVLDATGKFVMPGGIDPHTHLAMEFM 119 (331)
Q Consensus 51 ~~~~~~i~n~~i~~~~~----------~~~~~v~i~~g~I~~ig~~~~-~~~~~~~id~~g~~v~PG~ID~H~H~~~~~~ 119 (331)
++++++|+|++|+++++ .++++|+|+||+|++||+... .+++.++||++|++|+|||||+|+|+.+...
T Consensus 21 ~~~~~li~~~~v~~~~~~~~~~~~~~~~~~~~v~i~~g~I~~vg~~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~~~ 100 (468)
T 3lnp_A 21 AHADLRINSHWIIPIENTTDHNLVSNILIDHCLLIKDGIILAIEPQSSCQIPATETLDLGQQVLMPGWVNAHGHAAMSLF 100 (468)
T ss_dssp CCEEEEEEEEEECCSSCC-----CCSCEEEEEEEEETTEEEEEEETTTCCCCEEEEEECCSEEEEECEEECSCCGGGGGG
T ss_pred ccccEEEECCEEEeecCCcccccCccEecceEEEEECCEEEEEeCCccccCCCCeEEeCCCcEEEeCeechhhChhhhhh
Confidence 45689999999998653 358999999999999998654 2346789999999999999999999965421
Q ss_pred -C---------------------CCChhhHHH----HHHHHHhCCceEEecCcCCCCCcHHHHHHHHHHHhccceeeccc
Q 020079 120 -G---------------------SETIDDFFS----GQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGF 173 (331)
Q Consensus 120 -~---------------------~~~~~~~~~----~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (331)
+ ..++++.+. ....++++||||+.|+... .....+...+.+.+..+....
T Consensus 101 ~g~~~~~~l~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~----~~~~~~~~~~~g~r~~~~~~~ 176 (468)
T 3lnp_A 101 RGLADDLPLMTWLQEHVWPAEAQHVDEHFVKQGTELAIAEMIQSGTTTFADMYFY----PQQSGEAALAAGIRAVCFAPV 176 (468)
T ss_dssp TTSSCSCCHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEEECCSC----HHHHHHHHHHHTCEEEEEEEE
T ss_pred ccCcCCCCHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHhCCcEEEEEcccC----HHHHHHHHHHcCCeEEEeccc
Confidence 1 133444433 3455789999999998432 233344445555444333322
Q ss_pred cc-c--ccCCChhhHHHHHHHHHH-hCCC-----eEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEc-CCchhhHH
Q 020079 174 HM-A--ITKWDEVVSDEMEVMVKE-KGIN-----SFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA-ENGDAVFE 243 (331)
Q Consensus 174 ~~-~--~~~~~~~~~~~~~~~~~~-~g~~-----~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~-e~~~~~~~ 243 (331)
.. + .....++..+...++.+. .+.. .++..+.++..+.++++.++++++.|+++|+++++|+ ++..+...
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~ 256 (468)
T 3lnp_A 177 LDFPTNYAQNADEYIRKAIECNDRFNNHPMNEQGLVQIGFGPHAPYTVSDEPLKEITMLSDQLDMPVQIHLHETDFEVSE 256 (468)
T ss_dssp CSSCCSSCSSHHHHHHHHHHHHHHHHSCGGGTTCCEEEEEEECCTTTSCHHHHHHHHHHHHHHTCCEEEEESCSHHHHHH
T ss_pred cCCCcccccCHHHHHHHHHHHHHHhhcCCcccCceEEEEEEcCCCCCCCHHHHHHHHHHHHHcCCcEEEEeCCCHHHHHH
Confidence 21 1 111223444555555433 2433 6777888888888999999999999999999999997 55455544
Q ss_pred HH--------HHHHHcCCCCcccccccCChHHHHHHHHHHHHHHHhcCCCEEEEeCCCH-----HHHHHHHHHHHcCCCE
Q 020079 244 GQ--------KRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSM-----DAMEEIAKARKAGPNF 310 (331)
Q Consensus 244 ~~--------~~~~~~G~~~~~~~~~~~~~~~e~~~i~~~~~l~~~~g~~~~i~H~~~~-----~~~~~i~~~~~~Gi~v 310 (331)
.. +.+.+.|+++++....+.....+ +.++++.+.|+. ++||+.. .....++.+.+.|+++
T Consensus 257 ~~~~~g~~~i~~~~~~g~l~~~~~~~H~~~~~~-----~~~~~l~~~g~~--v~~~p~s~~~~~~~~~~~~~~~~~Gv~v 329 (468)
T 3lnp_A 257 SLETFNKRPTQRLADIGFLNERVSCVHMTQVDD-----GDIKILQKTGAS--IIHCPESNLKLASGFCPIAKLSAANIPL 329 (468)
T ss_dssp HHHHHSSCHHHHHHHTTCCSTTEEEEECCSCCH-----HHHHHHHHHCCE--EEECHHHHHHTTCCCCCHHHHHHTTCCE
T ss_pred HHHHhCCCHHHHHHHcCCCCCCeEEEeccCCCH-----HHHHHHHhcCCE--EEEChhhhhhcCCCCCCHHHHHHCCCeE
Confidence 33 34566777666543333221111 234566666764 5555432 2233578888999998
Q ss_pred EEecC
Q 020079 311 LNTTI 315 (331)
Q Consensus 311 ~~~~~ 315 (331)
..++.
T Consensus 330 ~lgtD 334 (468)
T 3lnp_A 330 AIGTD 334 (468)
T ss_dssp EECCC
T ss_pred EEECC
Confidence 87665
No 23
>4dyk_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO PSI-biology, NEW YORK structural genomics research consorti hydrolase; 2.00A {Pseudomonas aeruginosa}
Probab=99.92 E-value=7.1e-24 Score=200.56 Aligned_cols=254 Identities=17% Similarity=0.178 Sum_probs=167.3
Q ss_pred CCccEEEECcEEEeCCC----ceeeeEEEeCCEEEEeeCCCC--CCCCceEEeCCCCeeecccccccccccCCCCC----
Q 020079 51 SSSKILIKGGTVVNAHH----QQIADVYVEDGIVVAVQPNIN--VGDDVKVLDATGKFVMPGGIDPHTHLAMEFMG---- 120 (331)
Q Consensus 51 ~~~~~~i~n~~i~~~~~----~~~~~v~i~~g~I~~ig~~~~--~~~~~~~id~~g~~v~PG~ID~H~H~~~~~~~---- 120 (331)
++.+++|+|++|+++++ .++++|+|+||+|++||+... ..++.++||++|++|+|||||+|+|+.+....
T Consensus 6 ~~~~~li~~~~v~~~~~~~~~~~~~~v~i~~g~I~~ig~~~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~~g~~~ 85 (451)
T 4dyk_A 6 NPFDLLLLPTWIVPVEPAGVVLRDHALGIRDGQIALVAPREQAMRHGATEIRELPGMLLAPGLVNAHGHSAMSLFRGLAD 85 (451)
T ss_dssp CCEEEEEEEEEECCSSSTTCCEESEEEEEETTEEEEEEEHHHHTTTCEEEEEEEEEEEEEECEEECCCCGGGGGGTTSSC
T ss_pred chhcEEEECCEEEeeCCCCcEEeccEEEEECCEEEEEeCccccccCCCCeEEeCCCCEEeecccchhhChhhHHhccCCC
Confidence 45789999999999652 368999999999999998542 23457899999999999999999999654221
Q ss_pred ------------------CCChhhHHHHH----HHHHhCCceEEecCcCCCCCcHHHHHHHHHHHhccceeeccccc---
Q 020079 121 ------------------SETIDDFFSGQ----AAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHM--- 175 (331)
Q Consensus 121 ------------------~~~~~~~~~~~----~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 175 (331)
..++++++... ..++++||||++|+... .....+...+.+.+..+......
T Consensus 86 ~~~l~~wl~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~----~~~~~~a~~~~g~r~~~~~~~~~~~~ 161 (451)
T 4dyk_A 86 DLPLMTWLQDHIWPAEGQWVSEDFIRDGTELAIAEQVKGGITCFSDMYFY----PQAICGVVHDSGVRAQVAIPVLDFPI 161 (451)
T ss_dssp SSCHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEEEECSC----HHHHHHHHHHHTCEEEEEEEECSSCB
T ss_pred CCCHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHhCCcEEEEEcccC----HHHHHHHHHHcCCeEEEEchhhCCCC
Confidence 13344444433 44569999999998432 23334444555544433322211
Q ss_pred cccCCChhhHHHHHHHHHH-hCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEc-CCchhhHHHH--------
Q 020079 176 AITKWDEVVSDEMEVMVKE-KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA-ENGDAVFEGQ-------- 245 (331)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~-~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~-e~~~~~~~~~-------- 245 (331)
......++..++..++.++ .+...++..+.++..+.++++.++++++.|+++|+++++|+ ++..+.....
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~g~~~i 241 (451)
T 4dyk_A 162 PGARDSAEAIRQGMALFDDLKHHPRIRIAFGPHAPYTVSDDKLEQILVLTEELDASIQMHVHETAFEVEQAMERNGERPL 241 (451)
T ss_dssp TTBSSHHHHHHHHHHHHHHTTTCSSEEEEEEECCGGGSCHHHHHHHHHHHHHHTCCEEEEESCCHHHHHHHHHHHSSCHH
T ss_pred ccccCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCccCHHHHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHhCCCHH
Confidence 1111223445555555533 35667888888888888999999999999999999999997 5555554433
Q ss_pred HHHHHcCCCCcccccccCChHHHHHHHHHHHHHHHhcCCCEEEEeCCCH-----HHHHHHHHHHHcCCCEEEecC
Q 020079 246 KRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSM-----DAMEEIAKARKAGPNFLNTTI 315 (331)
Q Consensus 246 ~~~~~~G~~~~~~~~~~~~~~~e~~~i~~~~~l~~~~g~~~~i~H~~~~-----~~~~~i~~~~~~Gi~v~~~~~ 315 (331)
+.+.+.|+++++....+.....+ +.++++.+.|+. ++||+.. .....++++.++|++++.++.
T Consensus 242 ~~~~~~g~~~~~~~~~H~~~~~~-----~~~~~l~~~g~~--v~~~p~s~~~~~~~~~~~~~~~~~Gv~v~lgtD 309 (451)
T 4dyk_A 242 ARLHRLGLLGPRFQAVHMTQVDN-----DDLAMLVETNSS--VIHCPESNLKLASGFCPVEKLWQAGVNVAIGTD 309 (451)
T ss_dssp HHHHHTTCCSTTEEEEECCCCCH-----HHHHHHHHHTCE--EEECHHHHHHTTCCCCCHHHHHHHTCCEEECCC
T ss_pred HHHHHCCCCCCCeEEEECCCCCH-----HHHHHHHHcCCE--EEEChhhhhhccCCcccHHHHHhCCCeEEEECC
Confidence 34667777766543333221111 234556666764 5555422 223467888889999887665
No 24
>2r8c_A Putative amidohydrolase; unknown source, sargasso SEA, structural genomics, protein structure initiative, PSI; 2.31A {Unidentified} PDB: 3mkv_A*
Probab=99.91 E-value=1.5e-23 Score=197.04 Aligned_cols=220 Identities=17% Similarity=0.168 Sum_probs=145.0
Q ss_pred ccEEEECcEEEeCCC---ceeeeEEEeCCEEEEeeCCCCCCCCceEEeCCCCeeecccccccccccCCCCC-----CCCh
Q 020079 53 SKILIKGGTVVNAHH---QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMG-----SETI 124 (331)
Q Consensus 53 ~~~~i~n~~i~~~~~---~~~~~v~i~~g~I~~ig~~~~~~~~~~~id~~g~~v~PG~ID~H~H~~~~~~~-----~~~~ 124 (331)
.+++|+|++|++++. .++++|+|+||+|++|++....+++.++||++|++|+|||||+|+|+...... ..++
T Consensus 4 ~~~~i~n~~i~~~~~~~~~~~~~i~i~~g~I~~i~~~~~~~~~~~~iD~~g~~v~PGliD~H~H~~~~~~~~~~~~~~~~ 83 (426)
T 2r8c_A 4 TTFLFRNGALLDPDHPDLLQGFEILIEDGFIREVSDKPIKSSNAHVIDVKGKTIMPGLIDLHVHVVAIEFNLPRVATLPN 83 (426)
T ss_dssp CEEEEEEEEECCTTSSSCEEEEEEEEESSBEEEEESSCCCCSSCEEEECTTCEEEECEEEEEECTTCCSSCHHHHHHSCH
T ss_pred ccEEEEeeEEEeCCCCcccCCceEEEECCEEEEEcCCCCCCCCCeEEECCCCEEcCCeEeeeeccccccCCchhhccCCH
Confidence 468999999999863 35789999999999999864445567999999999999999999999876321 0122
Q ss_pred hhHH----HHHHHHHhCCceEEecCcCCCCCcHHHHHHHHHHHhccceeeccc---------------------------
Q 020079 125 DDFF----SGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGF--------------------------- 173 (331)
Q Consensus 125 ~~~~----~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------- 173 (331)
+... ...+.++++||||++|++.... ...+.++.....+++.......
T Consensus 84 ~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~-~l~~~i~~~~~~gpri~~~g~~i~~~~g~~~~~~~~~~~~~~~~~~~~~ 162 (426)
T 2r8c_A 84 VLVTLRAVPIMRAMLRRGFTTVRDAGGAGY-PFKQAVESGLVEGPRLFVSGRALSQTGGHADPRARSDYMPPDSPCGCCV 162 (426)
T ss_dssp HHHHHHHHHHHHHHHHTTEEEEEECSSCCH-HHHHHHHTTSSCCCEEEECCSEEECTTSTTCCCCCSSBCCCSCSSSSBC
T ss_pred HHHHHHHHHHHHHHHhCCeEEEEeCCCchH-HHHHHHHcCCCCCCeEEecCCcccCCCCCcccccccccccccccccccc
Confidence 2221 3345679999999999975432 2222222211122221111000
Q ss_pred ----cccccCCChhhHHHHHHHHHHhCCCeEEEEEe--------cCCCCcCCHHHHHHHHHHHHHcCCcEEEEcCCchhh
Q 020079 174 ----HMAITKWDEVVSDEMEVMVKEKGINSFKFFMA--------YKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAV 241 (331)
Q Consensus 174 ----~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~--------~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~ 241 (331)
+.......++..+.++++. +.|++.+|++.+ +.+...++++.++++++.|+++|+++++|+.+...+
T Consensus 163 ~~~~~~~~~~~~~~~~~~v~~~~-~~g~~~ik~~~~G~~~~~~~p~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~~~~~i 241 (426)
T 2r8c_A 163 RVGALGRVADGVDEVRRAVREEL-QMGADQIKIMASGGVASPTDPVGVFGYSEDEIRAIVAEAQGRGTYVLAHAYTPAAI 241 (426)
T ss_dssp CTTCCEEECCSHHHHHHHHHHHH-HHTCSSEEEECBCCSSSSSCCSSCBCSCHHHHHHHHHHHHHTTCCEEEEECSHHHH
T ss_pred cccccccccCCHHHHHHHHHHHH-HcCCCEEEEEecCCCCCCCCCcccccCCHHHHHHHHHHHHHcCCEEEEEeCChHHH
Confidence 0011122344556666666 679999999876 334457899999999999999999999998754432
Q ss_pred HHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHHHhcCCCEEEEeCCCHHHHHHHHHHHHcCCCEE
Q 020079 242 FEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGPNFL 311 (331)
Q Consensus 242 ~~~~~~~~~~G~~~~~~~~~~~~~~~e~~~i~~~~~l~~~~g~~~~i~H~~~~~~~~~i~~~~~~Gi~v~ 311 (331)
... .+.|.. .+.|+...+. +.++++++.|+.+.
T Consensus 242 ~~a-----------------------------------l~~G~~-~i~H~~~~~~-~~~~~~~~~gv~~~ 274 (426)
T 2r8c_A 242 ARA-----------------------------------VRCGVR-TIEHGNLIDD-ETARLVAEHGAYVV 274 (426)
T ss_dssp HHH-----------------------------------HHTTCS-EEEECTTCCH-HHHHHHHHTTCEEE
T ss_pred HHH-----------------------------------HHcCCC-EEecCCcCCH-HHHHHHHHcCCeEe
Confidence 211 123443 3677754433 66777888887664
No 25
>4dzh_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO YORK structural genomics research consortium; 1.55A {Xanthomonas campestris PV}
Probab=99.91 E-value=6.4e-24 Score=202.27 Aligned_cols=253 Identities=19% Similarity=0.184 Sum_probs=166.7
Q ss_pred CccEEEECcEEEeCCC----ceeeeEEEeCCEEEEeeCCCCCC---CCceEEeCCCCeeecccccccccccCCCCC----
Q 020079 52 SSKILIKGGTVVNAHH----QQIADVYVEDGIVVAVQPNINVG---DDVKVLDATGKFVMPGGIDPHTHLAMEFMG---- 120 (331)
Q Consensus 52 ~~~~~i~n~~i~~~~~----~~~~~v~i~~g~I~~ig~~~~~~---~~~~~id~~g~~v~PG~ID~H~H~~~~~~~---- 120 (331)
..+++|+|++|+++++ .++++|+|+||+|++|++....+ ++.++||++|++|+|||||+|+|+.++...
T Consensus 13 ~~d~li~~~~v~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~~~~~~~~~viD~~g~~v~PGlID~H~Hl~~~~~~g~~~ 92 (472)
T 4dzh_A 13 PCDLLIEAGYVVPIEPHAVVLEDHAVAVSNGVIVAVLPTADARVRFAPARTVSRPDAALMPGLVNAHTHNPMTLLRGVAD 92 (472)
T ss_dssp EEEEEEEEEEECCSSSTTCCEEEEEEEEETTEEEEEEEHHHHHHHEEEEEEEEEEEEEEEECEEEEEECGGGGGGTTSSC
T ss_pred cCcEEEECCEEEecCCCCcEecceEEEEECCEEEEEeCchhhhhcCCCCeEEeCCCcEEEECccccccChhhHHhccccC
Confidence 3678999999998653 46899999999999999854322 256899999999999999999999774211
Q ss_pred ------------------CCChhhHHH----HHHHHHhCCceEEecCcCCCCCcHHHHHHHHHHHhccceeeccccc---
Q 020079 121 ------------------SETIDDFFS----GQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHM--- 175 (331)
Q Consensus 121 ------------------~~~~~~~~~----~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 175 (331)
..++++.+. ....++++||||++|+.. .....++...+.+.+..+......
T Consensus 93 ~~~l~~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~----~~~~~~~a~~~~g~r~~~~~~~~~~~~ 168 (472)
T 4dzh_A 93 DLPLMVWLQQHIWPVEAAVIGPEFVADGTTLAIAEMLRGGTTCVNENYF----FADVQAAVYKQHGFRALVGAVIIDFPT 168 (472)
T ss_dssp SCCHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEEEECS----CHHHHHHHHHHTTCEEEEEEEECSSCC
T ss_pred CCCHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHhCCcEEEEEccc----CHHHHHHHHHHhCCeEEEEecccCCCc
Confidence 123333333 334478999999999862 223344455555544433332221
Q ss_pred cccCCChhhHHHHHHHHHH-hCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEc-CCchhhHHHH--------
Q 020079 176 AITKWDEVVSDEMEVMVKE-KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA-ENGDAVFEGQ-------- 245 (331)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~-~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~-e~~~~~~~~~-------- 245 (331)
......++.++++.++.++ .+...+++.+.++..+.++++.++++++.|+++|+++++|+ ++..+.....
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~iH~~e~~~~~~~~~~~~g~~~i 248 (472)
T 4dzh_A 169 AWASSDDEYFARAGELHDQWRDDPLISTAFAPHAPYTVNDANFERVRMLADQLDMPVHLHTHETAQEVADSVAQYGQRPL 248 (472)
T ss_dssp SSCSSHHHHHHHHHHHHHHHTTCSSEEEEEEECCTTTSCHHHHHHHHHHHHHHTCCEEEEESCCHHHHHHHHHHHSSCHH
T ss_pred ccccCHHHHHHHHHHHHHHhCCCCceEEEEecCCCCCCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCCHH
Confidence 1111223455555555533 35567888888888888999999999999999999999997 5655554443
Q ss_pred HHHHHcCCCCcccccccCChHHHHHHHHHHHHHHHhcCCCEEEEeCCCH-----HHHHHHHHHHHcCCCEEEecC
Q 020079 246 KRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSM-----DAMEEIAKARKAGPNFLNTTI 315 (331)
Q Consensus 246 ~~~~~~G~~~~~~~~~~~~~~~e~~~i~~~~~l~~~~g~~~~i~H~~~~-----~~~~~i~~~~~~Gi~v~~~~~ 315 (331)
+.+.+.|+++++....+..... .+.++++++.|+. ++||+.. .....++++.++|++++.++.
T Consensus 249 ~~~~~~g~~~~~~~~~H~~~l~-----~~~i~~l~~~g~~--v~~~p~s~~~~~~~~~~~~~~~~~Gv~v~lgtD 316 (472)
T 4dzh_A 249 ARLDRLGLVNDRLIAVHMTQLT-----EAEIHLCAERGVS--VVHCPESNLKLASGFCPACALQRASVNLAIGTD 316 (472)
T ss_dssp HHHHHHTCCSTTEEEEECCSCC-----HHHHHHHHHHTCE--EEECHHHHHHTTCCCCCHHHHHHTTCEEEECCC
T ss_pred HHHHHcCCCCCCeEEEeccCCC-----HHHHHHHHHcCCE--EEEChHHHHhcCCCCccHHHHHHCCCCEEEECC
Confidence 3456777776553332222111 1235566666765 4555421 223457888899999887665
No 26
>3ls9_A Triazine hydrolase; atrazine chlorohydrolase TRZN; 1.40A {Arthrobacter aurescens} PDB: 3lsc_A* 3lsb_A*
Probab=99.91 E-value=5.3e-23 Score=194.69 Aligned_cols=253 Identities=17% Similarity=0.100 Sum_probs=162.6
Q ss_pred EEEECc-EEEeCCC----ceeeeEEEeCCEEEEeeCCCCCCCCceEEeCCCCeeecccccccccccCCCCC---------
Q 020079 55 ILIKGG-TVVNAHH----QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMG--------- 120 (331)
Q Consensus 55 ~~i~n~-~i~~~~~----~~~~~v~i~~g~I~~ig~~~~~~~~~~~id~~g~~v~PG~ID~H~H~~~~~~~--------- 120 (331)
++|+|+ .|+++++ .++++|+|+||+|++|++....+++.++||++|++|+|||||+|+|+.++...
T Consensus 2 ~li~n~~~v~t~d~~~~~~~~~~v~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~~g~~~~~~~~ 81 (456)
T 3ls9_A 2 ILIRGLTRVITFDDQERELEDADILIDGPKIVAVGKDLSDRSVSRTIDGRGMIALPGLINSHQHLYEGAMRAIPQLERVT 81 (456)
T ss_dssp EEEEEEEEEECCCTTCCEEEEEEEEEETTEEEEEESSCCCTTCSEEEECTTEEEEECEEEEEECGGGGGGBTCGGGSSCC
T ss_pred EEEEcCcEEEEcCCCCceeccceEEEECCEEEEeCCCCCCCCCCeEEeCCCCEEecCeeecccccchhhhcccccCCCCC
Confidence 789999 6777664 37899999999999999975544567899999999999999999999754221
Q ss_pred -------------------CCChhhHHH----HHHHHHhCCceEEecCcCCCCC-----cHHHHHHHHHHHhccceeecc
Q 020079 121 -------------------SETIDDFFS----GQAAALAGGTTMHIDFVIPING-----SLTAGFEAYEKKAKNSCMDYG 172 (331)
Q Consensus 121 -------------------~~~~~~~~~----~~~~~l~~GvTtv~d~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 172 (331)
..++++++. ....++++||||+.|+....+. .....++...+.+.+..+...
T Consensus 82 l~~~l~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~a~~~~g~r~~~~~~ 161 (456)
T 3ls9_A 82 MASWLEGVLTRSAGWWRDGKFGPDVIREVARAVLLESLLGGITTVADQHLFFPGATADSYIDATIEAATDLGIRFHAARS 161 (456)
T ss_dssp HHHHHHHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHHHHTTEEEEEEEECCCCSSSCCTHHHHHHHHHHHHTCEEEEEEC
T ss_pred HHHHHHHhccccccccccccCCHHHHHHHHHHHHHHHHhCCeeEEEeccccccCcccchhHHHHHHHHHHcCCEEEEEcc
Confidence 122333332 3345789999999998432221 223334555555555333222
Q ss_pred cccc-----------ccCCChhhHHHHHHHHHHh-C---CCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEc-C
Q 020079 173 FHMA-----------ITKWDEVVSDEMEVMVKEK-G---INSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA-E 236 (331)
Q Consensus 173 ~~~~-----------~~~~~~~~~~~~~~~~~~~-g---~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~-e 236 (331)
.... .....++.+++..++.++. + ...++..+.++..+.++++.++++++.|+++|+++++|+ +
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~e 241 (456)
T 3ls9_A 162 SMTLGKSEGGFCDDLFVEPVDRVVQHCLGLIDQYHEPEPFGMVRIALGPCGVPYDKPELFEAFAQMAADYDVRLHTHFYE 241 (456)
T ss_dssp CCCCCGGGTCSSCGGGCCCHHHHHHHHHHHHHHHCCCSTTCSEEEEECCCCTTTSCHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred ccccccccccCCccccccCHHHHHHHHHHHHHHhhCcCCCCceEEEEecCCCCCCCHHHHHHHHHHHHHCCCCEEEEeCC
Confidence 1110 0011233455555655332 3 345677788888888999999999999999999999997 5
Q ss_pred CchhhHHHH--------HHHHHcCCCCcccccccCChHHHHHHHHHHHHHHHhcCCCEEEEeCCCH-----HHHHHHHHH
Q 020079 237 NGDAVFEGQ--------KRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSM-----DAMEEIAKA 303 (331)
Q Consensus 237 ~~~~~~~~~--------~~~~~~G~~~~~~~~~~~~~~~e~~~i~~~~~l~~~~g~~~~i~H~~~~-----~~~~~i~~~ 303 (331)
+..+ .... +.+.+.|+++++....+.....+ +.++++++.|+. ++||+.. .....++++
T Consensus 242 ~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~i~H~~~~~~-----~~~~~l~~~g~~--~~~~p~s~~~l~~~~~~~~~~ 313 (456)
T 3ls9_A 242 PLDA-GMSDHLYGMTPWRFLEKHGWASDRVWLAHAVVPPR-----EEIPEFADAGVA--IAHLIAPDLRMGWGLAPIREY 313 (456)
T ss_dssp TTHH-HHHHHHHSSCHHHHHHHTTCSSTTEEEEECCSCCG-----GGHHHHHHHTCE--EEECHHHHHHTTCCCCCHHHH
T ss_pred CchH-HHHHHHhCCCHHHHHHHcCCCCCCcEEEeccCCCH-----HHHHHHHHcCCE--EEEChhHHhhcCCCcchHHHH
Confidence 5444 3332 44667787766532222211111 234556666765 5555432 223467888
Q ss_pred HHcCCCEEEecC
Q 020079 304 RKAGPNFLNTTI 315 (331)
Q Consensus 304 ~~~Gi~v~~~~~ 315 (331)
.++|++++.++.
T Consensus 314 ~~~Gv~v~lgtD 325 (456)
T 3ls9_A 314 LDAGITVGFGTT 325 (456)
T ss_dssp HHTTCEEEECCC
T ss_pred HHCCCcEEEECC
Confidence 899999887664
No 27
>2paj_A Putative cytosine/guanine deaminase; NYSGXRC, PSI-II, amidohydrolase, sargasso SEA, enviro sample, structural genomics; 2.70A {Unidentified} SCOP: b.92.1.4 c.1.9.9
Probab=99.90 E-value=5.6e-23 Score=196.57 Aligned_cols=253 Identities=15% Similarity=0.089 Sum_probs=151.8
Q ss_pred CccEEEECcE-EEeCC--------CceeeeEEEeCCEEEEeeCCCCCCCCceEEeCCCCeeecccccccccccCCCCCC-
Q 020079 52 SSKILIKGGT-VVNAH--------HQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGS- 121 (331)
Q Consensus 52 ~~~~~i~n~~-i~~~~--------~~~~~~v~i~~g~I~~ig~~~~~~~~~~~id~~g~~v~PG~ID~H~H~~~~~~~~- 121 (331)
+++++|+|++ |++++ ...+++|+|+||||++||+... +++.++||++|++|+|||||+|+|+..+....
T Consensus 9 ~~~~li~n~~~i~~~~~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~-~~~~~viD~~G~~v~PG~ID~H~H~~~~~~~g~ 87 (492)
T 2paj_A 9 QPSTLIRNAAAIMTGGRGTADDPSRVPGPDIRIVGDTIDAIGALAP-RPGETIVDATDCVIYPAWVNTHHHLFQSLLKGE 87 (492)
T ss_dssp -CEEEEECBSEEBCCCCSSSSSCSBCCCCCEEEETTEEEEESSCCC-CTTCEEEECBTCEEEECEECCCCCGGGGGCCSC
T ss_pred CCCeEEECCEEEEecCCccccccceecccEEEEECCEEEEEcCCCC-CCCCeEEECCCcEEeeCccccccChhhHhhcCc
Confidence 3568999999 99876 3467899999999999998653 33568999999999999999999997652110
Q ss_pred ----------------------CChhhHHHHHHH----HHhCCceEEecCcCCCCC-----cHHHHHHHHHHHhccceee
Q 020079 122 ----------------------ETIDDFFSGQAA----ALAGGTTMHIDFVIPING-----SLTAGFEAYEKKAKNSCMD 170 (331)
Q Consensus 122 ----------------------~~~~~~~~~~~~----~l~~GvTtv~d~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 170 (331)
.++++++...+. ++++||||++|+....+. ......+...+.+.+....
T Consensus 88 ~~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~g~r~~~~ 167 (492)
T 2paj_A 88 PAGLDATLTPWLAATPYRFRALFDERRFRLAARIGLIELARSGCATVADHNYVYYPGMPFDSSAILFEEAEKLGLRFVLL 167 (492)
T ss_dssp C-----------------CGGGCCHHHHHHHHHHHHHHHHTTTEEEEEECCCCCCTTCSSCHHHHHHHHHHHTTCEEEEE
T ss_pred cCCCCCCHHHHHHhcccchhhcCCHHHHHHHHHHHHHHHHhcCcEEEEechhhcccccccchHHHHHHHHHHcCCEEEEE
Confidence 234666555555 899999999998642221 1222233333333332221
Q ss_pred cccc-cc------cc-----CCChhhHHHHHHHHHHh-CC---CeEEEEEecCCC-CcCCHHHHHHHHHHHHHcCCcEEE
Q 020079 171 YGFH-MA------IT-----KWDEVVSDEMEVMVKEK-GI---NSFKFFMAYKGS-FMINDELLIEGFKRCKSLGALAMV 233 (331)
Q Consensus 171 ~~~~-~~------~~-----~~~~~~~~~~~~~~~~~-g~---~~ik~~~~~~~~-~~~~~~~l~~~~~~A~~~g~~v~~ 233 (331)
.... .+ .. ...++.+++++++.+.. +. ..++.++.+++. ..++++.++++++.|+++|+++++
T Consensus 168 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~ 247 (492)
T 2paj_A 168 RGGATQTRQLEADLPTALRPETLDAYVADIERLAARYHDASPRAMRRVVMAPTTVLYSISPREMRETAAVARRLGLRMHS 247 (492)
T ss_dssp ECCCSCCCSCSTTSCGGGCCCCHHHHHHHHHHHHHHTCCCSTTCSEEEEECCTTTTTSSCHHHHHHHHHHHHHTTCEEEE
T ss_pred chhhcccccccccCCccccccCHHHHHHHHHHHHHHhccCCCCCceEEEEecccCCCCCCHHHHHHHHHHHHHcCCcEEE
Confidence 1110 00 00 01123455666666432 21 247777777776 678999999999999999999999
Q ss_pred EcCC-chhhHHH--------HHHHHHcCCCCccc---ccccCChHHHHHHHHHHHHHHHhcCCCEEEEeCCCH-----HH
Q 020079 234 HAEN-GDAVFEG--------QKRMIELGITGPEG---HALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSM-----DA 296 (331)
Q Consensus 234 H~e~-~~~~~~~--------~~~~~~~G~~~~~~---~~~~~~~~~e~~~i~~~~~l~~~~g~~~~i~H~~~~-----~~ 296 (331)
|+.+ ..+.+.. .+.+.+.|+.++.. |..+.. + +.++++++.|+. +++|+.. ..
T Consensus 248 H~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~i~H~~~~~---~-----~~i~~l~~~gv~--v~~~p~~~~~l~~~ 317 (492)
T 2paj_A 248 HLSETVGYQDSAYSMYGKSPVAFCGEHDWLGSDVWYAHLVKVD---A-----DEIALLAQTGTG--VAHCPQSNGRLGSG 317 (492)
T ss_dssp ECC-------------CCCHHHHHHHTTCCSTTEEEESCCSCC---H-----HHHHHHHHHTCE--EEECHHHHHCC---
T ss_pred EeCCChHHHHHHHHHcCCCHHHHHHHCCCCCCCcEEEEEecCC---H-----HHHHHHHHcCCE--EEECchhhcccCCC
Confidence 9854 3333322 23455667655442 222211 1 124455555643 4555321 22
Q ss_pred HHHHHHHHHcCCCEEEecC
Q 020079 297 MEEIAKARKAGPNFLNTTI 315 (331)
Q Consensus 297 ~~~i~~~~~~Gi~v~~~~~ 315 (331)
...++.+.+.|++++.++.
T Consensus 318 ~~p~~~~~~~Gv~v~lgTD 336 (492)
T 2paj_A 318 ICPVREMADAGVPVSIGVD 336 (492)
T ss_dssp --CCTTHHHHTCCEEECCC
T ss_pred CCCHHHHHHCCCcEEEeCC
Confidence 3446667788888876553
No 28
>1ra0_A Cytosine deaminase; alpha-beta barrel, hexamer, conformation change, D314G mutant, hydrolase; 1.12A {Escherichia coli} SCOP: b.92.1.2 c.1.9.5 PDB: 1r9x_A 1ra5_A 1r9y_A 1r9z_A 1rak_A 3r0d_A* 3o7u_A* 3rn6_A* 1k6w_A 1k70_A 3g77_A
Probab=99.90 E-value=4.6e-23 Score=193.92 Aligned_cols=179 Identities=17% Similarity=0.137 Sum_probs=112.5
Q ss_pred CccEEEECcEEEeCCCceeeeEEEeCCEEEEeeCCCCCC-CCceEEeCCCCeeecccccccccccCCCC-C---------
Q 020079 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVG-DDVKVLDATGKFVMPGGIDPHTHLAMEFM-G--------- 120 (331)
Q Consensus 52 ~~~~~i~n~~i~~~~~~~~~~v~i~~g~I~~ig~~~~~~-~~~~~id~~g~~v~PG~ID~H~H~~~~~~-~--------- 120 (331)
+.+++|+|++|++++ .+++|+|+||||++||+....+ ++.++||++|++|+|||||+|+|+..... +
T Consensus 7 ~~~~li~n~~v~~~~--~~~~v~I~~g~I~~vg~~~~~~~~~~~viD~~G~~v~PGlID~H~Hl~~~~~~~~~~~~~~~~ 84 (430)
T 1ra0_A 7 NALQTIINARLPGEE--GLWQIHLQDGKISAIDAQSGVMPITENSLDAEQGLVIPPFVEPHIHLDTTQTAGQPNWNQSGT 84 (430)
T ss_dssp -CCCEEEEEBCTTCC--SEEEEEEETTEEEEEEEESSCCCCCTTEEECTTCEEESCEEEEEECTTTTTCTTSSSCCSSCC
T ss_pred CCcEEEEeeEecCCC--ceeEEEEECCEEEEeecCCCCCCCCcceEccCCCEecccccccccchhhhhhcCCCcCCCCCC
Confidence 357899999999875 6889999999999999864432 35689999999999999999999976421 1
Q ss_pred -------------CCChhhHHHHH----HHHHhCCceEEecCcCCCCCc--HHHHHHHHHHHhccceeeccccc-cc--c
Q 020079 121 -------------SETIDDFFSGQ----AAALAGGTTMHIDFVIPINGS--LTAGFEAYEKKAKNSCMDYGFHM-AI--T 178 (331)
Q Consensus 121 -------------~~~~~~~~~~~----~~~l~~GvTtv~d~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~--~ 178 (331)
..++++++... +.++++||||++|+....... ..+.+....+. .+..+++.... +. .
T Consensus 85 ~~~~l~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 163 (430)
T 1ra0_A 85 LFEGIERWAERKALLTHDDVKQRAWQTLKWQIANGIQHVRTHVDVSDATLTALKAMLEVKQE-VAPWIDLQIVAFPQEGI 163 (430)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTEEEEEEEEECCSTTCHHHHHHHHHHHH-HTTTCEEEEEEECTTCS
T ss_pred HHHHHHHhHHhhhhcCHHHHHHHHHHHHHHHHhcCccEEeeccccCChHHHHHHHHHHHHHh-hhhhEEEEEEecCCccc
Confidence 11335554433 445799999999986432211 12222211111 11222221110 00 0
Q ss_pred CCChhhHHHHHHHHHHhCCCeEEEEEecCCCCc--CCHHHHHHHHHHHHHcCCcEEEEcC
Q 020079 179 KWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFM--INDELLIEGFKRCKSLGALAMVHAE 236 (331)
Q Consensus 179 ~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~--~~~~~l~~~~~~A~~~g~~v~~H~e 236 (331)
...++..+.++++. +.|...+.. .++.++. ++++.++++++.|+++|+++++|+.
T Consensus 164 ~~~~~~~~~~~~~~-~~g~~~~~~--~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~ 220 (430)
T 1ra0_A 164 LSYPNGEALLEEAL-RLGADVVGA--IPHFEFTREYGVESLHKTFALAQKYDRLIDVHCD 220 (430)
T ss_dssp SSSTTHHHHHHHHH-HTTCSEECC--CGGGSSSHHHHHHHHHHHHHHHHHHTCEEEEEEC
T ss_pred ccCchHHHHHHHHH-HhCCCeEee--eecccccccccHHHHHHHHHHHHHcCCCEEEEEC
Confidence 01223344466665 455444322 1333443 6789999999999999999999984
No 29
>2qt3_A N-isopropylammelide isopropyl amidohydrolase; N-isopropylammelide isopropylaminohydrolase ATZC, structural genomics, NYSGXRC, target 9364B; 2.24A {Pseudomonas SP}
Probab=99.90 E-value=5.7e-22 Score=184.62 Aligned_cols=257 Identities=16% Similarity=0.070 Sum_probs=153.5
Q ss_pred CccEEEECcEEEeCCCceeeeEEEeCCEEEEeeCCCCCCCCceEEeCCCCeeecccccccccccCCCC----------CC
Q 020079 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFM----------GS 121 (331)
Q Consensus 52 ~~~~~i~n~~i~~~~~~~~~~v~i~~g~I~~ig~~~~~~~~~~~id~~g~~v~PG~ID~H~H~~~~~~----------~~ 121 (331)
+.+++|+|++|+++... ++|+|+||||++|++.... +..++||++|++|+|||||+|+|+.++.. +.
T Consensus 4 ~~~~li~n~~v~~~~~~--~~v~I~~g~I~~vg~~~~~-~~~~viD~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~g~ 80 (403)
T 2qt3_A 4 DFDLIIRNAYLSEKDSV--YDIGIVGDRIIKIEAKIEG-TVKDEIDAKGNLVSPGFVDAHTHMDKSFTSTGERLPKFWSR 80 (403)
T ss_dssp CEEEEEEEEEETTTTEE--EEEEEETTEEEEEESSCCS-CEEEEEECTTCBEEECEEEEEECGGGTTTTCSSSSCTTCSS
T ss_pred ccceEEEeeEecCCCee--EEEEEECCEEEEeecCCCC-CccceEcCCCCEecccceeeeeccchhhcccccccccccCC
Confidence 46799999999986543 8999999999999986543 24579999999999999999999987532 21
Q ss_pred C-----------------ChhhHHH----HHHHHHhCCceEEecCcCCCCCc---HHHHH-HHHHHHhccceeecc-ccc
Q 020079 122 E-----------------TIDDFFS----GQAAALAGGTTMHIDFVIPINGS---LTAGF-EAYEKKAKNSCMDYG-FHM 175 (331)
Q Consensus 122 ~-----------------~~~~~~~----~~~~~l~~GvTtv~d~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~-~~~ 175 (331)
. ++++++. ..+.++++||||++++....+.. ..+.+ +...+.......... +..
T Consensus 81 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (403)
T 2qt3_A 81 PYTRDAAIEDGLKYYKNATHEEIKRHVIEHAHMQVLHGTLYTRTHVDVDSVAKTKAVEAVLEAKEELKDLIDIQVVAFAQ 160 (403)
T ss_dssp CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTTEEEEEEEEECSTTTTTHHHHHHHHHHHHHTTTCEEEEEEECT
T ss_pred CcccCcCHHHHHHHhhhcCHHHHHHHHHHHHHHHHHcCCcEEEEEEcccCccccchHHHHHHHHHHhhcceeEEEEEcCC
Confidence 0 2223332 35667899999998665432211 11222 222221111111110 100
Q ss_pred cccCCChhhHHHHHHHHHHhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEcC-Cchhh----HHHHHHHHH
Q 020079 176 AITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAE-NGDAV----FEGQKRMIE 250 (331)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e-~~~~~----~~~~~~~~~ 250 (331)
......++..+.++++. +.|...++. +.++.....+++.++++++.|+++|+++++|+. +..+. +...+.+.+
T Consensus 161 ~~~~~~~~~~~~~~~~~-~~g~~~~~~-~~p~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~ 238 (403)
T 2qt3_A 161 SGFFVDLESESLIRKSL-DMGCDLVGG-VDPATRENNVEGSLDLCFKLAKEYDVDIDYHIHDIGTVGVYSINRLAQKTIE 238 (403)
T ss_dssp TCTTTSTTHHHHHHHHH-HTTCSEEEC-BCTTTTTSCHHHHHHHHHHHHHHTTCEEEEEECCCHHHHHHHHHHHHHHHHH
T ss_pred cccccCcchHHHHHHHH-hcCCCeEEE-ecCCCCCCChHHHHHHHHHHHHHcCCCeEEEeCCcccchhHHHHHHHHHHHH
Confidence 00111223344455555 566655543 245545556679999999999999999999974 43322 222344556
Q ss_pred cCCCCcccccccCChHHH--HHHHHHHHHHHHhcCCCEEEEeCCCHHHHHHHHHHHHcCCCEEEecC
Q 020079 251 LGITGPEGHALSRPPLLE--GEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGPNFLNTTI 315 (331)
Q Consensus 251 ~G~~~~~~~~~~~~~~~e--~~~i~~~~~l~~~~g~~~~i~H~~~~~~~~~i~~~~~~Gi~v~~~~~ 315 (331)
.|+ ..+....+.....+ .....+.++++++.|+.+.++... ......++++.++|+++..++.
T Consensus 239 ~g~-~~~~~i~H~~~~~~~~~~~~~~~~~~l~~~g~~v~~~p~~-~~~~~~~~~~~~~Gv~v~lgtD 303 (403)
T 2qt3_A 239 NGY-KGRVTTSHAWCFADAPSEWLDEAIPLYKDSGMKFVTCFSS-TPPTMPVIKLLEAGINLGCASD 303 (403)
T ss_dssp TTC-TTSEEEEECTHHHHSCHHHHHHHHHHHHHHTCEEEEETTT-CCTTCCHHHHHHTTCEEEEECC
T ss_pred cCC-CCCeEEEehhhhccCChhhHHHHHHHHHHcCCEEEECCCC-CCCCCCHHHHHHcCCcEEEeCC
Confidence 776 33322222221111 111245667777788765554432 2334567888899999987665
No 30
>4aql_A Guanine deaminase; hydrolase, purine metabolism; HET: TXC; 1.99A {Homo sapiens} PDB: 2uz9_A* 3e0l_A
Probab=99.90 E-value=8.5e-23 Score=194.67 Aligned_cols=267 Identities=16% Similarity=0.066 Sum_probs=171.6
Q ss_pred ccEEEECcEEEeCCC-----ceeeeEEEeC-CEEEEeeCCCCC--------CCCceEEeC-CCCeeecccccccccccCC
Q 020079 53 SKILIKGGTVVNAHH-----QQIADVYVED-GIVVAVQPNINV--------GDDVKVLDA-TGKFVMPGGIDPHTHLAME 117 (331)
Q Consensus 53 ~~~~i~n~~i~~~~~-----~~~~~v~i~~-g~I~~ig~~~~~--------~~~~~~id~-~g~~v~PG~ID~H~H~~~~ 117 (331)
.+++|+|..|.+... .++++|+|+| |||++|++.... .++.++||+ +|++|+|||||+|+|+.+.
T Consensus 31 ~~~~~~g~~i~~~~~~~~~~~~~~~v~I~~~g~I~~vg~~~~~~~~~~~~~~~~~~viD~~~g~~v~PG~ID~H~H~~~~ 110 (476)
T 4aql_A 31 LAHIFRGTFVHSTWTCPMEVLRDHLLGVSDSGKIVFLEEASQQEKLAKEWCFKPCEIRELSHHEFFMPGLVDTHIHASQY 110 (476)
T ss_dssp CCEEEEEEEEECCSSCSCEEEEEEEEEECTTSBEEEEEEGGGHHHHHHHTTCCGGGCEECCTTCEEEECEEEEEEEGGGG
T ss_pred ccEEEEccEEecCCCCceeEecCcEEEEecCCeEEEecCcchhhhhhhhccCCCceEEEcCCCCEEeCCeeccccchHHH
Confidence 568999999987542 3689999998 999999986321 134689995 5899999999999999654
Q ss_pred CC-CC--------------------CChhh----HHH-HHHHHHhCCceEEecCcCCCCCcHHHHHHHHHHHhccceeec
Q 020079 118 FM-GS--------------------ETIDD----FFS-GQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDY 171 (331)
Q Consensus 118 ~~-~~--------------------~~~~~----~~~-~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (331)
.. +. ..+++ .+. ....++++||||+.++............+...+.+.+..+..
T Consensus 111 ~~rg~~~d~~l~~wL~~~~~p~e~~~~~~~~~~~~~~~~~~e~l~~G~Tt~~~~~~~~~~~~~~~~~a~~~~G~r~~~~~ 190 (476)
T 4aql_A 111 SFAGSSIDLPLLEWLTKYTFPAEHRFQNIDFAEEVYTRVVRRTLKNGTTTACYFATIHTDSSLLLADITDKFGQRAFVGK 190 (476)
T ss_dssp GGTTSCCCSCHHHHHHHTHHHHHHGGGSHHHHHHHHHHHHHHHHHTTEEEEEEECCSCHHHHHHHHHHHHHHTCEEEEEC
T ss_pred HHHHHhcCCCHHHHHHHhhhhHHHhcCCHHHHHHHHHHHHHHHHHCCeeEEEEecccCchHHHHHHHHHHHhCCEEEEee
Confidence 21 11 01111 112 234689999999997754332233334555666665543332
Q ss_pred cccc-c-----ccCCChhhHHHHHHHHHH---hCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEc-CCchhh
Q 020079 172 GFHM-A-----ITKWDEVVSDEMEVMVKE---KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA-ENGDAV 241 (331)
Q Consensus 172 ~~~~-~-----~~~~~~~~~~~~~~~~~~---~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~-e~~~~~ 241 (331)
.... + .....++.+++.++++++ .+...++..+.++..+.++++.++++++.|+++|+++++|+ |+..++
T Consensus 191 ~~~d~~~~~p~~~~~~~~~l~~~~~~i~~~~~~~~~~v~~~l~p~~~~~~s~e~l~~~~~~A~~~g~~v~~H~~e~~~e~ 270 (476)
T 4aql_A 191 VCMDLNDTFPEYKETTEESIKETERFVSEMLQKNYSRVKPIVTPRFSLSCSETLMGELGNIAKTRDLHIQSHISENRDEV 270 (476)
T ss_dssp EECSCCSSCTTSCCCHHHHHHHHHHHHHHHHHHTCSSEEECBEECCTTTSCHHHHHHHHHHHHHTTCCEEEEESCSHHHH
T ss_pred ccccCCCCCcccccCHHHHHHHHHHHHHHHhcCCCCceEEEEeCCcCCcCCHHHHHHHHHHHHHcCCceEEEecCCHHHH
Confidence 2111 0 111223344455554432 34557888888999999999999999999999999999996 766665
Q ss_pred HHHH----------HHHHHcCCCCcccccccCChHHHHHHHHHHHHHHHhcCCCEEEEeCCCH-----HHHHHHHHHHHc
Q 020079 242 FEGQ----------KRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSM-----DAMEEIAKARKA 306 (331)
Q Consensus 242 ~~~~----------~~~~~~G~~~~~~~~~~~~~~~e~~~i~~~~~l~~~~g~~~~i~H~~~~-----~~~~~i~~~~~~ 306 (331)
+... +.+.+.|+++++....+..... ++.++++.+.|+. ++||+.. .++..++++.++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~H~~~l~-----~~~~~~l~~~g~~--v~~~P~sn~~l~~g~~p~~~~~~~ 343 (476)
T 4aql_A 271 EAVKNLYPSYKNYTSVYDKNNLLTNKTVMAHGCYLS-----AEELNVFHERGAS--IAHCPNSNLSLSSGFLNVLEVLKH 343 (476)
T ss_dssp HHHHHHCTTSSSHHHHHHTTTCCSTTEEEEECTTCC-----HHHHHHHHHHTCE--EEECHHHHHHTTCCCCCHHHHHHT
T ss_pred HHHHHHhCCCCCHHHHHHHcCCCCCCEEEEeCCCCC-----HHHHHHHHHcCCE--EEECchhhhhhCcchHHHHHHHHC
Confidence 5443 3467788887664333332221 2235666667765 5666532 234578899999
Q ss_pred CCCEEEecCCccccchhhhh
Q 020079 307 GPNFLNTTIPLCDSCSNIIR 326 (331)
Q Consensus 307 Gi~v~~~~~p~~~~~~~~~~ 326 (331)
|++|+.++.-......++..
T Consensus 344 Gv~v~lGtD~~~~~~~~~~~ 363 (476)
T 4aql_A 344 EVKIGLGTDVAGGYSYSMLD 363 (476)
T ss_dssp TCEEEECCCTTTSSCCCHHH
T ss_pred CCcEEEeCCCCCCCCCCHHH
Confidence 99999887743333333333
No 31
>1rk6_A D-aminoacylase; TIM barrel, beta barrel, insertion, hydrolase; 1.43A {Alcaligenes faecalis} SCOP: b.92.1.6 b.92.1.6 c.1.9.11 PDB: 1rjp_A 1v51_A 1rjq_A 1rjr_A 1rk5_A 1v4y_A 1m7j_A
Probab=99.89 E-value=3.3e-22 Score=191.57 Aligned_cols=232 Identities=18% Similarity=0.225 Sum_probs=153.8
Q ss_pred ccEEEECcEEEeCCC--ceeeeEEEeCCEEEEeeCCCCCCCCceEEeCCCCeeecccccccccccCCCCCCCChhhHHHH
Q 020079 53 SKILIKGGTVVNAHH--QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSG 130 (331)
Q Consensus 53 ~~~~i~n~~i~~~~~--~~~~~v~i~~g~I~~ig~~~~~~~~~~~id~~g~~v~PG~ID~H~H~~~~~~~~~~~~~~~~~ 130 (331)
++++|+|++|++++. ..+++|+|+||+|++|++... +++.++||++|++|+|||||+|+|+..+... ...
T Consensus 21 ~~~~i~~~~v~~~~~~~~~~~~v~i~~g~I~~i~~~~~-~~~~~~iD~~g~~v~PG~iD~H~H~~~~~~~-------~~~ 92 (496)
T 1rk6_A 21 FDYILSGGTVIDGTNAPGRLADVGVRGDRIAAVGDLSA-SSARRRIDVAGKVVSPGFIDSHTHDDNYLLK-------HRD 92 (496)
T ss_dssp BSEEEESSEECCSSSCCCEECEEEEETTEEEEEECCTT-SCBSCEEECTTCEEEECEEESSCCCTTHHHH-------CTT
T ss_pred ccEEEECCEEEeCCCCceeccEEEEECCEEEEecCCCC-CCCCeEEeCCCCEEecCEeeeeecCCccccc-------cHH
Confidence 368999999998764 468899999999999997542 2346799999999999999999999764210 112
Q ss_pred HHHHHhCCceEEecCcC-----CCC-------------------CcHHHHHHHHHHHhccceeecccccc----------
Q 020079 131 QAAALAGGTTMHIDFVI-----PIN-------------------GSLTAGFEAYEKKAKNSCMDYGFHMA---------- 176 (331)
Q Consensus 131 ~~~~l~~GvTtv~d~~~-----~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 176 (331)
.+.++++||||++++.. +.. ......++..+.. ...+++.+..+
T Consensus 93 ~~~~~~~G~Tt~~~~~~g~~~~p~~~~~l~~~i~~~~~~~~~~~~~~~~~~e~~~~~--~~~~~~~~~~g~~~~~~~~~~ 170 (496)
T 1rk6_A 93 MTPKISQGVTTVVTGNCGISLAPLAHANPPAPLDLLDEGGSFRFARFSDYLEALRAA--PPAVNAACMVGHSTLRAAVMP 170 (496)
T ss_dssp CHHHHTTTEEEEEESCTTCCSCSEECSSCCTTGGGGCSSSCCEESSHHHHHHHHHHS--CCSSEEEEEEEHHHHHHHHCS
T ss_pred HHHHHcCCeEEEEeCCCCCCCCCCChHHHHHhhcccCcccccCccCHHHHHHHHhcc--CCccceEEecccccceeeecc
Confidence 46788999999998742 110 0111122222211 11222211110
Q ss_pred c--cCCChhhHHHHHHHHH---HhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHHHc
Q 020079 177 I--TKWDEVVSDEMEVMVK---EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIEL 251 (331)
Q Consensus 177 ~--~~~~~~~~~~~~~~~~---~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~~~ 251 (331)
. .....+...+++.+.+ +.|+..++....+......+.+++.++++.++++|.++.+|+++....
T Consensus 171 ~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~el~~~~~~a~~~g~~v~~H~~~~~~~---------- 240 (496)
T 1rk6_A 171 DLRREATADEIQAMQALADDALASGAIGISTGAFYPPAAHASTEEIIEVCRPLITHGGVYATHMRDEGEH---------- 240 (496)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHHHHTCCEEEEETTSGGGTTCCHHHHHHHHTHHHHHTCEEEEECSCSSTT----------
T ss_pred ccccCCCHHHHHHHHHHHHHHHHcCCcEEeeccccCCCCCCCHHHHHHHHHHHHHcCCEEEEEeCCCccc----------
Confidence 0 0112233444544442 468887765432211124577888899999999999999999754321
Q ss_pred CCCCcccccccCChHHHHHHHHHHHHHHHhcCCCEEEEeCC---------CHHHHHHHHHHHHcCCCEEEecCCccccc
Q 020079 252 GITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVM---------SMDAMEEIAKARKAGPNFLNTTIPLCDSC 321 (331)
Q Consensus 252 G~~~~~~~~~~~~~~~e~~~i~~~~~l~~~~g~~~~i~H~~---------~~~~~~~i~~~~~~Gi~v~~~~~p~~~~~ 321 (331)
+...+.+.++++.++|.++|+.|+. +...++.+++++++| +|++++||++..+
T Consensus 241 ----------------~~~~l~~~~~~a~~~g~~v~i~H~~~~~~~~~g~~~~~~~~l~~a~~~g-~v~~~~~~~~~~~ 302 (496)
T 1rk6_A 241 ----------------IVQALEETFRIGRELDVPVVISHHKVMGKLNFGRSKETLALIEAAMASQ-DVSLDAYPYVAGS 302 (496)
T ss_dssp ----------------HHHHHHHHHHHHHHHTSCEEECSCCCCSGGGTTTHHHHHHHHHHHHHHS-CEEEEECSCSCEE
T ss_pred ----------------HHHHHHHHHHHHHHcCCeEEEEEEeccCCcchhhHHHHHHHHHHHHHcC-CeEEEEeccCCCC
Confidence 1345667778888999999999983 345577888889899 9999999977544
No 32
>2i9u_A Cytosine/guanine deaminase related protein; protein structure initiative II (PSI-II), amidohydrol guanine deaminase; HET: GUN; 2.05A {Clostridium acetobutylicum} SCOP: b.92.1.4 c.1.9.9
Probab=99.89 E-value=2.5e-22 Score=189.40 Aligned_cols=191 Identities=17% Similarity=0.104 Sum_probs=122.7
Q ss_pred CccEEEECcEEEeCCC-----ceeeeEEEeCCEEEEeeCCCCCC-CCceEEeCCCCeeecccccccccccCCCC-CC---
Q 020079 52 SSKILIKGGTVVNAHH-----QQIADVYVEDGIVVAVQPNINVG-DDVKVLDATGKFVMPGGIDPHTHLAMEFM-GS--- 121 (331)
Q Consensus 52 ~~~~~i~n~~i~~~~~-----~~~~~v~i~~g~I~~ig~~~~~~-~~~~~id~~g~~v~PG~ID~H~H~~~~~~-~~--- 121 (331)
|.+++|+|++|++++. ..+++|+|+||||++|++....+ ++.++||++|++|+|||||+|+|+.++.. +.
T Consensus 8 m~~~li~~~~v~~~~~~~~~~~~~~~v~I~~g~I~~ig~~~~~~~~~~~viD~~G~~v~PGlID~H~H~~~~~~~g~~~~ 87 (439)
T 2i9u_A 8 INLKIFKGNLIFTKTSDKFTIMKDSYIVVIDGKIASVSSNLPDKYKGNPIIDFRNNIIIPGMNDLHAHASQYKNLGIGMD 87 (439)
T ss_dssp -CEEEEEEEEEEEEETTEEEEEEEEEEEEETTEEEEEESSCCGGGTTSCEEEEEEEEEEECEEEEEEEGGGGGGTTCCCS
T ss_pred cccEEEEeeEEEecCCccceEEeccEEEEECCEEEEecccccccCCCceEEcCCCeEEEecceecccccchHhhhCCcCC
Confidence 4678999999998762 35889999999999999753321 34589999999999999999999986421 10
Q ss_pred -C-----------------ChhhHHHH----HHHHHhCCceEEecCcCCCCCcHHHHHHHHHHHhccceeecccc---cc
Q 020079 122 -E-----------------TIDDFFSG----QAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFH---MA 176 (331)
Q Consensus 122 -~-----------------~~~~~~~~----~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 176 (331)
. ++++++.. .+.++++||||++|+...........++...+.+.+........ .+
T Consensus 88 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~g~r~~~~~~~~~~~~p 167 (439)
T 2i9u_A 88 KELLPWLNNYTFPEEAKFLNVDYAKKTYGRLIKDLIKNGTTRVALFATLHKDSTIELFNMLIKSGIGAYVGKVNMDYNCP 167 (439)
T ss_dssp SCHHHHHHHTHHHHHHGGGSHHHHHHHHHHHHHHHHHTTEEEEEEECCSCHHHHHHHHHHHHHHTCEEEEECEECCSSCC
T ss_pred CCHHHHHHhcccchhhccCCHHHHHHHHHHHHHHHHhcCceEEEEccccccchHHHHHHHHHHcCCEEEEEeeeccccCC
Confidence 0 22233322 35689999999999754321122334444444444432221111 11
Q ss_pred --ccCCChhhHHHHHHHHHH--hCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEcC-CchhhH
Q 020079 177 --ITKWDEVVSDEMEVMVKE--KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAE-NGDAVF 242 (331)
Q Consensus 177 --~~~~~~~~~~~~~~~~~~--~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e-~~~~~~ 242 (331)
.....++..++..++.++ .+...++.+++++....++.+.++++++.|+++|+++++|+. +..+.+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~ 238 (439)
T 2i9u_A 168 DYLTENYITSLNDTEEIILKYKDKSNIVKPIITPRFVPSCSNELMDGLGKLSYKYRLPVQSHLSENLDEIA 238 (439)
T ss_dssp TTSCCCHHHHHHHHHHHHHHHTTTCSSEEECBEECCGGGCCHHHHHHHHHHHHHHTCCEEEEESCCHHHHH
T ss_pred cccchhHHHHHHHHHHHHHHHhCCCCceEEEEecCCcCcCCHHHHHHHHHHHHhcCCcEEEeecCChHHHH
Confidence 001111233444455533 234457777777666678999999999999999999999985 444433
No 33
>1e9y_B Urease subunit beta; hydrolase, dodecamer; HET: KCX; 3.00A {Helicobacter pylori} SCOP: b.92.1.1 c.1.9.2 PDB: 1e9z_B* 3qga_C* 3qgk_C*
Probab=99.89 E-value=8.5e-23 Score=197.54 Aligned_cols=208 Identities=17% Similarity=0.212 Sum_probs=146.7
Q ss_pred CccEEEECcEEEeCCCceeeeEEEeCCEEEEeeCCCCC------------CCCceEEeCCCCeeecccccccccccCCCC
Q 020079 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINV------------GDDVKVLDATGKFVMPGGIDPHTHLAMEFM 119 (331)
Q Consensus 52 ~~~~~i~n~~i~~~~~~~~~~v~i~~g~I~~ig~~~~~------------~~~~~~id~~g~~v~PG~ID~H~H~~~~~~ 119 (331)
..+++|+|++|+++.+..+++|+|+||||++||+.... .++.++||++|++|+|||||+|+|+..+
T Consensus 65 ~~dllI~n~~Vid~~gi~~~dI~I~dGrI~~IG~~~~~~~~~~~~~~~~~~~~~evIDa~G~iV~PGlID~HvHl~~p-- 142 (569)
T 1e9y_B 65 ELDLIITNALIVDYTGIYKADIGIKDGKIAGIGKGGNKDMQDGVKNNLSVGPATEALAGEGLIVTAGGIDTHIHFISP-- 142 (569)
T ss_dssp CCSEEEEEEEEEETTEEEEEEEEEETTEEEEEECCBCTTTSSSCCGGGBCCTTCEEEECTTCEEEECEEEEEEETTCT--
T ss_pred cCCEEEEeeEEECCCCcEeeeEEEECCEEEEeecCCCccccccccccccCCCCCeEEECCCCEEecCEEEEeecCCCc--
Confidence 45799999999997666789999999999999975321 2356899999999999999999999765
Q ss_pred CCCChhhHHHHHHHHHhCCceEEecCcCCCCC--------cHHHHHHHHHHHhccceeeccccccccCCChhhHHHHHHH
Q 020079 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING--------SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVM 191 (331)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (331)
+ . .+.++++||||++|++..... .....++...+......+++.+..... ....++++++
T Consensus 143 ~-----~----~~~al~~GvTTv~d~g~~p~~~t~~~~~~~g~~~l~~~~~a~~~~~~~~~~~g~g~---~~~~~~l~e~ 210 (569)
T 1e9y_B 143 Q-----Q----IPTAFASGVTTMIGGGTGPADGTNATTITPGRRNLKWMLRAAEEYSMNLGFLAKGN---ASNDASLADQ 210 (569)
T ss_dssp T-----H----HHHHHHTTEEEEEEECCSSCHHHHHCCCCCHHHHHHHHHHHHTTSSSEEEEEEECC---CSCHHHHHHH
T ss_pred H-----H----HHHHHhCCeeEEEcCCcCCCCCCcCcccCCcHHHHHHHHHHhcccCceEEEECCCC---cCCHHHHHHH
Confidence 1 1 577899999999998542210 113334444444444445554432211 1234567777
Q ss_pred HHHhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHHHcCCCCcccccccCChHHHHHH
Q 020079 192 VKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEA 271 (331)
Q Consensus 192 ~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~e~~~ 271 (331)
. +.|+.++|.+.. +..+++.++++++.|+++|+++++|+++..+... .+ .
T Consensus 211 ~-~~Ga~gik~~~~----~~~t~e~l~~~l~~A~~~g~~V~iHa~~~~e~g~-----------------------~~-~- 260 (569)
T 1e9y_B 211 I-EAGAIGFKIHED----WGTTPSAINHALDVADKYDVQVAIHTDTLNEAGC-----------------------VE-D- 260 (569)
T ss_dssp H-HTTCSEEEECGG----GCCCHHHHHHHHHHHHHTTCEEEECCCTTCSSCC-----------------------HH-H-
T ss_pred H-HcCCCEEEecCC----CCCCHHHHHHHHHHHHHhCCEEEEEcCCcccchH-----------------------HH-H-
Confidence 7 578888887643 3468999999999999999999999875322100 00 1
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCHHH---HHHHHHHHHcCC
Q 020079 272 TTRAIRLAEFVNTPLYVVHVMSMDA---MEEIAKARKAGP 308 (331)
Q Consensus 272 i~~~~~l~~~~g~~~~i~H~~~~~~---~~~i~~~~~~Gi 308 (331)
.++...|.++|+.|++.... .+.++++++.|+
T Consensus 261 -----~la~~~g~~~hi~H~~~~~~~~~~d~I~~~~~~gv 295 (569)
T 1e9y_B 261 -----TMAAIAGRTMHTFHTEGAGGGHAPDIIKVAGEHNI 295 (569)
T ss_dssp -----HHHHHTTCCEEETTTTSTTSCSTTTGGGGGGSTTE
T ss_pred -----HHHHHcCCCEEEEEcccCcccccHHHHHHHHHcCC
Confidence 12234678999999987543 578899999886
No 34
>2ood_A BLR3880 protein; PSI-II, PSI-2, guanine deaminase, guanine, structural genomics, protein structure initiative; HET: GUN; 2.62A {Bradyrhizobium japonicum} SCOP: b.92.1.4 c.1.9.9
Probab=99.89 E-value=1.5e-22 Score=192.97 Aligned_cols=254 Identities=16% Similarity=0.110 Sum_probs=150.5
Q ss_pred cEEEECcEEEeCCC---------------ceeeeEEEeCCEEEEeeCCCCC---CCCceEEeCCCCeeeccccccccccc
Q 020079 54 KILIKGGTVVNAHH---------------QQIADVYVEDGIVVAVQPNINV---GDDVKVLDATGKFVMPGGIDPHTHLA 115 (331)
Q Consensus 54 ~~~i~n~~i~~~~~---------------~~~~~v~i~~g~I~~ig~~~~~---~~~~~~id~~g~~v~PG~ID~H~H~~ 115 (331)
.++|.+++|+++.. .++++|+|+||||++||+.... .++.++||++|++|+|||||+|+|+.
T Consensus 4 ~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~V~I~~G~I~~Vg~~~~~~~~~~~~~viD~~G~~v~PG~ID~H~Hl~ 83 (475)
T 2ood_A 4 TTVGIRGTFFDFVDDPWKHIGNEQAAARFHQDGLMVVTDGVIKAFGPYEKIAAAHPGVEITHIKDRIIVPGFIDGHIHLP 83 (475)
T ss_dssp CEEEEEEEEEEESSCGGGSTTCGGGGEEEEEEEEEEEESSBEEEEEEHHHHHHHSTTCEEEEEEEEEEEECEEEEEEEGG
T ss_pred cceEEEEEEEecCCccccccccCCCcceEEECCEEEEECCEEEEEeChhhhccccCCCeEEeCCCcEEecceecCcccHH
Confidence 36788999998643 3578999999999999975321 13468999999999999999999986
Q ss_pred CCCC----CCC-----------------ChhhH----HHHHHHHHhCCceEEecCcCCCCCcHHHHHHHHHHHhccceee
Q 020079 116 MEFM----GSE-----------------TIDDF----FSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMD 170 (331)
Q Consensus 116 ~~~~----~~~-----------------~~~~~----~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (331)
+... +.. +++++ ....+.++++||||++|+............+..++.+.+....
T Consensus 84 ~~~~~g~~~~~~~~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~g~r~~~g 163 (475)
T 2ood_A 84 QTRVLGAYGEQLLPWLQKSIYPEEIKYKDRNYAREGVKRFLDALLAAGTTTCQAFTSSSPVATEELFEEASRRNMRVIAG 163 (475)
T ss_dssp GTTCTTCCSCCHHHHHHHHTHHHHGGGGSHHHHHHHHHHHHHHHHHTTEEEEEEECCSSHHHHHHHHHHHHHHTCCEEEC
T ss_pred hHhhcCCCCCCHHHHHHHhccchhhccCCHHHHHHHHHHHHHHHHhcCceEEEEecccCchhHHHHHHHHHHcCCeEEEE
Confidence 5421 110 23333 3346678999999999975432212223334444444443221
Q ss_pred ccccc---c--ccCCChhhHHHHHHHHHH-hCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHc-CCcEEEEcC-CchhhH
Q 020079 171 YGFHM---A--ITKWDEVVSDEMEVMVKE-KGINSFKFFMAYKGSFMINDELLIEGFKRCKSL-GALAMVHAE-NGDAVF 242 (331)
Q Consensus 171 ~~~~~---~--~~~~~~~~~~~~~~~~~~-~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~-g~~v~~H~e-~~~~~~ 242 (331)
..... + .....++.++++.++.++ .+...++..+.++..+.++++.++++++.|+++ |+++++|+. +..+..
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~g~~v~~H~~e~~~~~~ 243 (475)
T 2ood_A 164 LTGIDRNAPAEFIDTPENFYRDSKRLIAQYHDKGRNLYAITPRFAFGASPELLKACQRLKHEHPDCWVNTHISENPAECS 243 (475)
T ss_dssp CEECCSSSCTTTCCCHHHHHHHHHHHHHHHTTBTTEEEEEEECBGGGCCHHHHHHHHHHHHHCTTSEEEEECSCCHHHHH
T ss_pred eeecccCCCcccccCHHHHHHHHHHHHHHhccCCceEEEEeccccCcCCHHHHHHHHHHHHhCCCCcEEEeeCCChHHHH
Confidence 11110 0 111122344555555533 244567777788777888999999999999999 999999984 555444
Q ss_pred HHH----------HHHHHcCCCCcccccccCChHHHHHHHHHHHHHHHhcCCCEEEEeCCCHH-----HHHHHHHHHHcC
Q 020079 243 EGQ----------KRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMD-----AMEEIAKARKAG 307 (331)
Q Consensus 243 ~~~----------~~~~~~G~~~~~~~~~~~~~~~e~~~i~~~~~l~~~~g~~~~i~H~~~~~-----~~~~i~~~~~~G 307 (331)
... +.+.+.|+.+.+....+.....+ +.++++++.|+. +.+|+... ....++++.+.|
T Consensus 244 ~~~~~~g~~~~~~~~~~~~g~~~~~~~i~H~~~~~~-----~~i~~~~~~g~~--~~~~P~~~~~l~~~~~~~~~~~~~G 316 (475)
T 2ood_A 244 GVLVEHPDCQDYLGVYEKFDLVGPKFSGGHGVYLSN-----NEFRRMSKKGAA--VVFCPCSNLFLGSGLFRLGRATDPE 316 (475)
T ss_dssp HHHHHCTTCSSHHHHHHTTTCCSTTEEEECCTTCCH-----HHHHHHHHHTCE--EEECHHHHHHTTCCCCCHHHHTCTT
T ss_pred HHHHHcCCCccHHHHHHHcCCCCCCcEEEEeecCCH-----HHHHHHHHcCCE--EEEChhhhhhcccCcCCHHHHHhCC
Confidence 432 22444555444321111111111 234445555543 44443211 122456677777
Q ss_pred CC--EEEec
Q 020079 308 PN--FLNTT 314 (331)
Q Consensus 308 i~--v~~~~ 314 (331)
++ ++.++
T Consensus 317 v~~~~~lgT 325 (475)
T 2ood_A 317 HRVKMSFGT 325 (475)
T ss_dssp SCCEEEECC
T ss_pred CCCcEEEEc
Confidence 77 66543
No 35
>3be7_A Zn-dependent arginine carboxypeptidase; unknown source, amidohydrolase, sargasso SEA, structural GEN protein structure initiative, PSI; HET: ARG; 2.30A {Unidentified} SCOP: b.92.1.9 c.1.9.18 PDB: 3dug_A*
Probab=99.89 E-value=2.5e-21 Score=180.66 Aligned_cols=218 Identities=16% Similarity=0.112 Sum_probs=138.8
Q ss_pred CCccEEEECcEEEeCCC--ceeeeEEEeCCEEEEeeCCCCCCCCceEEeCCCCeeecccccccccccCCCCCC------C
Q 020079 51 SSSKILIKGGTVVNAHH--QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGS------E 122 (331)
Q Consensus 51 ~~~~~~i~n~~i~~~~~--~~~~~v~i~~g~I~~ig~~~~~~~~~~~id~~g~~v~PG~ID~H~H~~~~~~~~------~ 122 (331)
|+.+++|+|++|++++. ...++|+|+||||++|++. . +++.++||++|++|+|||||+|+|+. ..... .
T Consensus 4 ~~~~~~i~n~~v~~~~~~~~~~~~v~I~~g~I~~ig~~-~-~~~~~viD~~g~~v~PGlID~H~H~~-~~~~~~~~~~~~ 80 (408)
T 3be7_A 4 TSEDFLIKSKGYLDIQTGEIIKADLLIRNGKIAEIGKI-N-TKDATVISIPDLILIPGLMDSHVHIV-GNDSKGEESIAD 80 (408)
T ss_dssp -CCCEEEEEEEEECTTTCCEECCEEEEETTEEEEEECC-C-CSSSEEEEEEEEEEEECEEEEEECCS-SCCCCSGGGTTC
T ss_pred ccceEEEEeeEEEeCCCCceeeeEEEEECCEEEEEeCC-C-CCCCeEEECCCCEECcCceeeeEccc-CCCCcchhhhcC
Confidence 45679999999999765 3348999999999999986 2 34568999999999999999999998 32111 1
Q ss_pred ChhhHH----HHHHHHHhCCceEEecCcCCCCCcHHHHHHHHHHHhc----cceee------cccccccc----------
Q 020079 123 TIDDFF----SGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAK----NSCMD------YGFHMAIT---------- 178 (331)
Q Consensus 123 ~~~~~~----~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~----~~~~~------~~~~~~~~---------- 178 (331)
+++... ...+.++++||||++|+..... ....++...+.+. +.... ...+....
T Consensus 81 ~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~--~~~~~~~~~~~~~~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 158 (408)
T 3be7_A 81 SSHMGTVWGVVNAEKTLMAGFTTVRNVGAANY--ADVSVRDAIERGVINGPTMLVSGPALGITGGHCDHNLLPPEFNYSS 158 (408)
T ss_dssp CTHHHHHHHHHHHHHHHTTTEEEEEECCCSTT--HHHHHHHHHHTTSSCCCEEEECCSCBBCTTSTTSCCCSCTTTCCCC
T ss_pred CHHHHHHHHHHHHHHHHHcCCCEEEeCCCccc--cCHHHHHHHHCCCCCCCEEEEccceeeccCCCCccccccccccccC
Confidence 223221 2467789999999999864322 2223333333322 11110 00111000
Q ss_pred ----CCChhhHHHHHHHHHHhCCCeEEEEEecC--------CCCcCCHHHHHHHHHHHHHcCCcEEEEcCCchhhHHHHH
Q 020079 179 ----KWDEVVSDEMEVMVKEKGINSFKFFMAYK--------GSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQK 246 (331)
Q Consensus 179 ----~~~~~~~~~~~~~~~~~g~~~ik~~~~~~--------~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~ 246 (331)
...++..+.+++.. +.|.+.+|.+.+.. +...++++.++++++.|+++|+++.+|+.+...+..
T Consensus 159 ~~~~~~~~~~~~~~~~~~-~~g~~~ik~~~~g~~~~~~~~~g~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~i~~--- 234 (408)
T 3be7_A 159 EGVVDSPWEARKMVRKNR-KYGADLIKFCATGGVMSRNTDVNAKQFTLEEMKAIVDEAHNHGMKVAAHAHGLIGIKA--- 234 (408)
T ss_dssp TTBCCSHHHHHHHHHHHH-HTTCSEEEEECBCCSSSSSCCTTSBCSCHHHHHHHHHHHHHTTCEEEEEECSHHHHHH---
T ss_pred CcccCCHHHHHHHHHHHH-hcCCCEEEEEecCCcCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEeCCHHHHHH---
Confidence 01112222233333 46888899885431 135678999999999999999999999875433211
Q ss_pred HHHHcCCCCcccccccCChHHHHHHHHHHHHHHHhcCCCEEEEeCCCHHHHHHHHHHHHcCCCEE
Q 020079 247 RMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGPNFL 311 (331)
Q Consensus 247 ~~~~~G~~~~~~~~~~~~~~~e~~~i~~~~~l~~~~g~~~~i~H~~~~~~~~~i~~~~~~Gi~v~ 311 (331)
+.+.|.. .+.|+..... +.+++++++|+.+.
T Consensus 235 --------------------------------~~~~g~~-~i~H~~~~~~-~~i~~~~~~g~~v~ 265 (408)
T 3be7_A 235 --------------------------------AIKAGVD-SVEHASFIDD-ETIDMAIKNNTVLS 265 (408)
T ss_dssp --------------------------------HHHHTCS-EEEECTTCCH-HHHHHHHHTTCEEE
T ss_pred --------------------------------HHHcCCC-EEEECCCCCH-HHHHHHHHCCCEEe
Confidence 1123444 5888876543 77888888997665
No 36
>2qs8_A XAA-Pro dipeptidase; amidohydrolase, TIM barrel, protein structure initiative, PSI-2, NYSGXRC, structural genomics; 2.33A {Alteromonas macleodii} SCOP: b.92.1.9 c.1.9.18
Probab=99.88 E-value=6.7e-21 Score=178.42 Aligned_cols=184 Identities=15% Similarity=0.173 Sum_probs=120.7
Q ss_pred CccEEEECcEEEeCCC--c-eeeeEEEeCCEEEEeeCCCCCCCCc--eEEeCCCCeeecccccccccccCCCCCC-----
Q 020079 52 SSKILIKGGTVVNAHH--Q-QIADVYVEDGIVVAVQPNINVGDDV--KVLDATGKFVMPGGIDPHTHLAMEFMGS----- 121 (331)
Q Consensus 52 ~~~~~i~n~~i~~~~~--~-~~~~v~i~~g~I~~ig~~~~~~~~~--~~id~~g~~v~PG~ID~H~H~~~~~~~~----- 121 (331)
.++++|+|++|++++. . .+++|+|+||+|++|++.. .+++. ++||++|++|+|||||+|+|+..+....
T Consensus 6 ~~~~li~n~~v~~~~~~~~~~~~~v~I~~g~I~~vg~~~-~~~~~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~~~~~ 84 (418)
T 2qs8_A 6 DSKTLIHAGKLIDGKSDQVQSRISIVIDGNIISDIKKGF-ISSNDFEDYIDLRDHTVLPGLMDMHVHFGQEYQSKAQAPI 84 (418)
T ss_dssp -CCEEEEEEEECCSSCSSCEEEEEEEEETTEEEEEEESC-CCCTTSSEEEEEEEEEEEECEEEEEECTTCCCCCTTTSCS
T ss_pred CccEEEEeeEEEeCCCCccccCcEEEEECCEEEEEeCCC-CCCCCcceEEECCCCEECCCeeeeeeccccCCCCCchhhh
Confidence 3568999999999875 2 5789999999999999864 23456 8999999999999999999998752110
Q ss_pred -CChhhHHH----HHHHHHhCCceEEecCcCCCCCcHHHHHHHHHHHhc----cceeec------ccccc----------
Q 020079 122 -ETIDDFFS----GQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAK----NSCMDY------GFHMA---------- 176 (331)
Q Consensus 122 -~~~~~~~~----~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~----~~~~~~------~~~~~---------- 176 (331)
.+++.... ..+.++++||||++|+..... ....++...+.+. +..... +.+..
T Consensus 85 ~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~--~~~~~~~~~~~g~~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~ 162 (418)
T 2qs8_A 85 KVEREMQAILATQHAYVTFKSGFTTVRQVGDSGL--VAISLRDAINSGKLAGPRIFAAGKTIATTGGHADPTNGKAVDDY 162 (418)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTTEEEEEECCCSSS--HHHHHHHHHHTTSSCCCEEEECCSCBEETTCTTCTTTTCCGGGC
T ss_pred cCCHHHHHHHHHHHHHHHHHcCCCEEEeCCCCcc--ccHHHHHHHHCCCCCCCeEEecCccccccCCCcccccccccccc
Confidence 23343322 567789999999999854321 2223333333332 211100 00100
Q ss_pred --------ccCCChhhHHHHHHHHHHhCCCeEEEEEecC--------CCCcCCHHHHHHHHHHHHHcCCcEEEEcCCch
Q 020079 177 --------ITKWDEVVSDEMEVMVKEKGINSFKFFMAYK--------GSFMINDELLIEGFKRCKSLGALAMVHAENGD 239 (331)
Q Consensus 177 --------~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~--------~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~ 239 (331)
.....++..+.+++.. +.|.+.+|++.+.. +...++++.++++++.|+++|+++.+|+++..
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~ik~~~~g~~~~~~~~~g~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~ 240 (418)
T 2qs8_A 163 DYPVPEQGVVNGPYEVYAAVRQRY-KDGADGIKITVTGGVLSVAKSGQNPQFTQEEVDAVVSAAKDYGMWVAVHAHGAE 240 (418)
T ss_dssp CCCCGGGTEECSHHHHHHHHHHHH-HHTCSEEEEECBCCSSSSSSCSSCBCSCHHHHHHHHHHHHHTTCEEEEEECSHH
T ss_pred ccccccccccCCHHHHHHHHHHHH-HcCCCEEEEEecCCCCCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEECCHH
Confidence 0001112223333333 46888999986431 23567899999999999999999999997544
No 37
>2ics_A Adenine deaminase; TIM barrel, binuclear zinc, adenine complex, amidohydrolase, structural genomics, PSI, protein structure initiative; HET: KCX ADE; 2.30A {Enterococcus faecalis} SCOP: b.92.1.8 c.1.9.14
Probab=99.88 E-value=2.7e-22 Score=185.26 Aligned_cols=177 Identities=16% Similarity=0.124 Sum_probs=117.5
Q ss_pred CccEEEECcEEEeCCCceeeeEEEeCCEEEEeeCCCCCCCCceEEeCCC-CeeecccccccccccCCCCCCCChhhHHHH
Q 020079 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATG-KFVMPGGIDPHTHLAMEFMGSETIDDFFSG 130 (331)
Q Consensus 52 ~~~~~i~n~~i~~~~~~~~~~v~i~~g~I~~ig~~~~~~~~~~~id~~g-~~v~PG~ID~H~H~~~~~~~~~~~~~~~~~ 130 (331)
+++++|+|++|++++ +++|+|+||||++|++... +++.++||++| ++|+|||||+|+|+..+ +....+ ..
T Consensus 4 ~~~~~i~~~~v~~~~---~~~v~i~~g~I~~ig~~~~-~~~~~~iD~~g~~~v~PG~ID~H~H~~~~--~~~~~~---~~ 74 (379)
T 2ics_A 4 DYDLLIKNGQTVNGM---PVEIAIKEKKIAAVAATIS-GSAKETIHLEPGTYVSAGWIDDHVHCFEK--MALYYD---YP 74 (379)
T ss_dssp CEEEEEEEEECTTSC---EEEEEEETTEEEEEESCCC-CCEEEEEECCTTCEEEECEEEEEECCCTT--SSSSCC---CH
T ss_pred cccEEEECCEEEcCC---cceEEEECCEEEEecCCCC-CCCCcEEeCCCCEEEccCEEEeccccCcc--CccccC---ch
Confidence 357899999999864 7899999999999998542 23458999999 99999999999999875 222222 22
Q ss_pred HHHHHhCCceEEecCcCCCCCcHHHHHHHHHHHhc--cceeecccccccc--CC---ChhhHHHHHHHHHH--hCCCeEE
Q 020079 131 QAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAK--NSCMDYGFHMAIT--KW---DEVVSDEMEVMVKE--KGINSFK 201 (331)
Q Consensus 131 ~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~--~~---~~~~~~~~~~~~~~--~g~~~ik 201 (331)
.+.++++||||++|+......+.....+...+... ...+++...+... .. .+...++++++.++ .++.++|
T Consensus 75 ~~~~~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 154 (379)
T 2ics_A 75 DEIGVKKGVTTVIDAGTTGAENIHEFYDLAQQAKTNVFGLVNISKWGIVAQDELADLSKVQASLVKKAIQELPDFVVGIK 154 (379)
T ss_dssp HHHTGGGTEEEEEEESSSCTTTHHHHHHHHHTSSSEEEEEEESSTTTTSSSCTTSSGGGCCHHHHHHHHHHCTTTEEEEE
T ss_pred hhhHhhCceeEEEcCCCCCccCHHHHHHHHHhhcccEEEEccccccCCCCHHHHHHHHHHHHHHHHHHHHhhhCcceEEE
Confidence 46789999999999864323233333332222221 1222222111111 01 11224566666643 3667788
Q ss_pred EEEecCCCCcCCHHHHHHHHHHHHH-cCCcEEEEcCC
Q 020079 202 FFMAYKGSFMINDELLIEGFKRCKS-LGALAMVHAEN 237 (331)
Q Consensus 202 ~~~~~~~~~~~~~~~l~~~~~~A~~-~g~~v~~H~e~ 237 (331)
.+..+.....++.+.++++++.|++ +|+++.+|++.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~a~~~~g~~v~~H~~~ 191 (379)
T 2ics_A 155 ARMSRTVIGDNGITPLELAKQIQQENQEIPLMVHIGS 191 (379)
T ss_dssp EEESHHHHTTCTTHHHHHHHHHHHTTTTCCEEEEECS
T ss_pred EeccccccccchHHHHHHHHHHHHHhcCCeEEEeCCC
Confidence 8776533334677889999999999 99999999854
No 38
>3v7p_A Amidohydrolase family protein; iron binding site, enzyme functio initiative, EFI; HET: TLA; 1.35A {Nitratiruptor SP}
Probab=99.87 E-value=1.6e-21 Score=183.47 Aligned_cols=185 Identities=16% Similarity=0.073 Sum_probs=122.4
Q ss_pred EEEECcEEEeCCC-ceeeeEEEeCCEEEEeeCCCCC---CCCceEEeCCCCeeecccccccccccCCCCCCC--------
Q 020079 55 ILIKGGTVVNAHH-QQIADVYVEDGIVVAVQPNINV---GDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSE-------- 122 (331)
Q Consensus 55 ~~i~n~~i~~~~~-~~~~~v~i~~g~I~~ig~~~~~---~~~~~~id~~g~~v~PG~ID~H~H~~~~~~~~~-------- 122 (331)
++|+|++|++++. .++++|+| ||+|++||+..+. .++.++||++|++|+|||||+|+|+.++.....
T Consensus 2 ~~i~~~~v~~~~~~~~~~~v~i-~g~I~~Vg~~~~~~~~~~~~~vid~~g~~v~PGlId~H~H~~~~~~rg~~~~~~l~~ 80 (427)
T 3v7p_A 2 RIIKPFAILTPQTIIQDKAVAF-DKKIEAIDTVENLIKKYPNAAVEHDENSLLLPGFANPHLHLEFSANKATLQYGDFIP 80 (427)
T ss_dssp EEEEEEEEECSSSEEESCEEEE-SSBEEEEECHHHHHHHCTTSEEEEEEEEEEEECEEEEEECGGGTTCSSCSCCSSHHH
T ss_pred EEEECCEEEcCCCEEeCcEEEE-CCEEEEecChhhhccccCCceEEeCCCCEEecCEeecccCcchhhcccccccCCHHH
Confidence 6899999999876 46899999 9999999985432 135689999999999999999999986532110
Q ss_pred ------------ChhhH----HHHHHHHHhCCceEEecCcCCCCCcHHHHHHHHHHHhccceeeccccccccCCChhhHH
Q 020079 123 ------------TIDDF----FSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSD 186 (331)
Q Consensus 123 ------------~~~~~----~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (331)
++++. ..+...++++||||+.|+..... . ++...+.+.+................+..+
T Consensus 81 wl~~~~~~~~~~~~~~~~~~~~~~~~e~l~~GvTtv~d~~~~~~-~----~~a~~~~Gir~~~~~~~~~~~~~~~~~~~~ 155 (427)
T 3v7p_A 81 WLYSVIRHREDLLPLCDGACLEQTLSSIIQTGTTAIGAISSYGE-D----LQACIDSALKVVYFNEVIGSNAATADVMYA 155 (427)
T ss_dssp HHHHHHHHHHHHHHHSCHHHHHHHHHHHHHTTEEEEEEEESSST-T----HHHHHHBSSEEEEEEEECBCCGGGHHHHHH
T ss_pred HHHHHHHhHHhcCHHHHHHHHHHHHHHHHHhCCEEEEEecCcHH-H----HHHHHhcCCeEEEeccccCCChhhhhHHHH
Confidence 01111 22334578899999999865432 1 344444444433222111110101111222
Q ss_pred HHHHHHHH---hCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEc-CCchhhHHHH
Q 020079 187 EMEVMVKE---KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA-ENGDAVFEGQ 245 (331)
Q Consensus 187 ~~~~~~~~---~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~-e~~~~~~~~~ 245 (331)
+..+..+. .+...++..+++++++.++++.++++++.|+++|+++++|+ |+..+.+...
T Consensus 156 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~e~l~~~~~~A~~~g~~v~~H~~E~~~e~~~~~ 218 (427)
T 3v7p_A 156 SFLERFHQSKKHENERFKAAVAIHSPYSVHYILAKRALDIAKKYGSLVSVHFMESRAEREWLD 218 (427)
T ss_dssp HHHHHHHHHHTTCBTTEEEEEEECCTTTBCHHHHHHHHHHHHHHTCCEEEEESCSHHHHHHHH
T ss_pred HHHHHHHHhhhccCCceEEEEecCCCCcCCHHHHHHHHHHHHhCCCCEEEEeCCCHHHHHHHH
Confidence 22222211 23456788888999999999999999999999999999995 7776665543
No 39
>2imr_A Hypothetical protein DR_0824; zinc, NYSGXRC, PSI2, structural genomics, protein structure initiative; 1.78A {Deinococcus radiodurans} SCOP: b.92.1.11 c.1.9.16
Probab=99.87 E-value=1.4e-21 Score=183.35 Aligned_cols=186 Identities=13% Similarity=0.085 Sum_probs=118.3
Q ss_pred CCccEEEECcEEEeCCC--ceeeeEEEeCCEEEEeeCCCCC---CCCceEEeCCCCeeecccccccccccCCCC------
Q 020079 51 SSSKILIKGGTVVNAHH--QQIADVYVEDGIVVAVQPNINV---GDDVKVLDATGKFVMPGGIDPHTHLAMEFM------ 119 (331)
Q Consensus 51 ~~~~~~i~n~~i~~~~~--~~~~~v~i~~g~I~~ig~~~~~---~~~~~~id~~g~~v~PG~ID~H~H~~~~~~------ 119 (331)
.|.+++|+|++|++++. ..+++|+|+||||++|++.... .++.++||++ ++|+|||||+|+|+..+..
T Consensus 35 ~~~~~li~n~~v~~~~~~~~~~~~V~I~~g~I~~vg~~~~~~~~~~~~~viD~~-~~v~PGlID~H~H~~~~~~~g~~~~ 113 (420)
T 2imr_A 35 AHTPRLLTCDVLYTGMGGAQSPGGVVVVGETVAAAGHPDELRRQYPHAAEERAG-AVIAPPPVNAHTHLDMSAYEFQALP 113 (420)
T ss_dssp -CCEEEEEESEEECC---EESSEEEEEETTEEEEEECHHHHHHHCTTCEEEECC-SEESSCCCEEEEESSCCHHHHHHCH
T ss_pred ccccEEEECCEEEeCCCCeeeccEEEEECCEEEEecCcccccccCCCCeeecCC-eEECCCCEecCcCcchhhhhhccCC
Confidence 35679999999999874 4678999999999999975321 1346899999 9999999999999976410
Q ss_pred --CC-----------CChhhHHHHHHHHHhCCceEEecCcCCCCCcHHHHHHH-HHHHhccceeeccccccccCCChhhH
Q 020079 120 --GS-----------ETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEA-YEKKAKNSCMDYGFHMAITKWDEVVS 185 (331)
Q Consensus 120 --~~-----------~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (331)
.. .++.......+.++++||||++|+... .+.++. ..+.+.+....+.+.........+..
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~-----~~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~ 188 (420)
T 2imr_A 114 YFQWIPEVVIRGRHLRGVAAAQAGADTLTRLGAGGVGDIVWA-----PEVMDALLAREDLSGTLYFEVLNPFPDKADEVF 188 (420)
T ss_dssp HHHTSHHHHHHHTTCCHHHHHHHHHHHHHHTTCCCEEEEECS-----HHHHHHHHTCTTCCEEEEEEECBCCGGGHHHHH
T ss_pred HHHHHHHhhhhhhhccCHHHHHHHHHHHHhcCcEEEEEccCC-----HHHHHHHHHhcCcEEEEEeeecCCCchhhHHHH
Confidence 00 001222445677899999999998632 122321 22222232222211110000001122
Q ss_pred HHHHHHHHH---hCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEc-CCchhhH
Q 020079 186 DEMEVMVKE---KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA-ENGDAVF 242 (331)
Q Consensus 186 ~~~~~~~~~---~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~-e~~~~~~ 242 (331)
++..+++++ .+...+++++.++....++++.++++++.|+++|+++++|+ ++..+.+
T Consensus 189 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~e~~~~~~ 249 (420)
T 2imr_A 189 AAARTHLERWRRLERPGLRLGLSPHTPFTVSHRLMRLLSDYAAGEGLPLQIHVAEHPTELE 249 (420)
T ss_dssp HHHHHHHHHHHTTCBTTEEEEEEECCSSSBCHHHHHHHHHHHHHHTCCBEEEESCSHHHHH
T ss_pred HHHHHHHHHHhcccCCceEEEecCCcCCCcCHHHHHHHHHHHHHCCCcEEEEeCCCHHHHH
Confidence 333333322 23456788888877777899999999999999999999998 5544443
No 40
>3pnu_A Dihydroorotase; TIM barrel, zinc binding, hydrolase, structu genomics, center for structural genomics of infectious DISE csgid; HET: KCX; 2.40A {Campylobacter jejuni subsp}
Probab=99.87 E-value=4.2e-22 Score=181.83 Aligned_cols=185 Identities=16% Similarity=0.107 Sum_probs=137.7
Q ss_pred CCCeeecccccccccccCCCCCCCChhhHHHHHHHHHhCCceEEecCcCCCCC-cHHHHHHHHHHHhcc-ce-eeccccc
Q 020079 99 TGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKN-SC-MDYGFHM 175 (331)
Q Consensus 99 ~g~~v~PG~ID~H~H~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~-~~-~~~~~~~ 175 (331)
.|++++||+||.|+|+.. |. ......+++++|+|+++||.+..+. ...+.++.+++.... .. +++.+++
T Consensus 22 ~~~~vlPG~ID~HvHlre---G~-----~~~e~~aA~aGG~Ttvi~mPnt~P~~~~~~~~~~~~~~a~~~~~~vd~~~~~ 93 (359)
T 3pnu_A 22 SNAMKLKNPLDMHLHLRD---NQ-----MLELIAPLSARDFCAAVIMPNLIPPLCNLEDLKAYKMRILKACKDENFTPLM 93 (359)
T ss_dssp SCCEEEESCEEEEECCCS---HH-----HHHHHHHHHHTTCSEEEECCCCSSCCCSHHHHHHHHHHHHHHHTTSCCEEEE
T ss_pred CCcEEccCcEEccccCCC---CC-----cchhHHHHHhCCCcEEEECCCCCCCCCcHHHHHHHHHHHhccCCCceEEEee
Confidence 589999999999999976 21 2333457888999999999865554 456666665554433 44 7777776
Q ss_pred c--ccCCChhhHHHHHHHHHHhCCCeEEEEEecC------CCCcCCHHHHHHHHHHHHHcCCcEEEEcCCchhhHHHHHH
Q 020079 176 A--ITKWDEVVSDEMEVMVKEKGINSFKFFMAYK------GSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKR 247 (331)
Q Consensus 176 ~--~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~------~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~ 247 (331)
. .+.. ..+++.++. +. +.++|.|+.+. +....+.+.+.++++.+++.|.++.+|+|+.+.+.
T Consensus 94 ~l~lt~~---~~~el~~l~-~~-v~~~Kl~~aga~~~s~~~~~~~~~~~l~~~l~~~~~~g~~v~vHaEd~~~i~----- 163 (359)
T 3pnu_A 94 TLFFKNY---DEKFLYSAK-DE-IFGIKLYPAGITTNSNGGVSSFDIEYLKPTLEAMSDLNIPLLVHGETNDFVM----- 163 (359)
T ss_dssp EEECSCC---CHHHHHHHT-TT-CSEEEECBTTSSSSCTTSBCCCCHHHHHHHHHHHHHTTCCEEECCCCSSCGG-----
T ss_pred eeEecCC---CHHHHHHHH-Hh-hhehhheeCCCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEecCCchHhH-----
Confidence 6 5522 245666665 44 77889887541 12233889999999999999999999999876421
Q ss_pred HHHcCCCCcccccccCChHHHHHHHHHHHHHHHhc-CCCEEEEeCCCHHHHHHHHHHHHcCCCEEEecCCccccchh
Q 020079 248 MIELGITGPEGHALSRPPLLEGEATTRAIRLAEFV-NTPLYVVHVMSMDAMEEIAKARKAGPNFLNTTIPLCDSCSN 323 (331)
Q Consensus 248 ~~~~G~~~~~~~~~~~~~~~e~~~i~~~~~l~~~~-g~~~~i~H~~~~~~~~~i~~~~~~Gi~v~~~~~p~~~~~~~ 323 (331)
..|..++.+.+.+++++ |.++|++|+|+.++++.++++ .+|++++||||+.++.
T Consensus 164 ------------------~~E~~ai~r~~~la~~~~g~~lhi~HvSt~~~v~~I~~A----~~VtaEv~phhL~lt~ 218 (359)
T 3pnu_A 164 ------------------DRESNFAKIYEKLAKHFPRLKIVMEHITTKTLCELLKDY----ENLYATITLHHLIITL 218 (359)
T ss_dssp ------------------GTTGGGHHHHHHHHHHCTTSCEEECSCCSHHHHHHHHHC----TTEEEEECSGGGTCCH
T ss_pred ------------------HHHHHHHHHHHHHHHHcCCCcEEEEecCcHHHHHHHHhc----CCceEEEechhhEEcH
Confidence 12345677788888865 999999999999998988887 7999999999998764
No 41
>2p9b_A Possible prolidase; protein structure initiative II, PSI-2, amidohydrolase, structural genomics; 1.70A {Bifidobacterium longum NCC2705} SCOP: b.92.1.10 c.1.9.17
Probab=99.87 E-value=1.5e-20 Score=178.15 Aligned_cols=184 Identities=18% Similarity=0.162 Sum_probs=117.9
Q ss_pred ccEEEECcEEEeCCC---ceeeeEEE-eCCEEEEeeC--CCCCCCCceEEeCCCCeeecccccccccccCCCCCCC----
Q 020079 53 SKILIKGGTVVNAHH---QQIADVYV-EDGIVVAVQP--NINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSE---- 122 (331)
Q Consensus 53 ~~~~i~n~~i~~~~~---~~~~~v~i-~~g~I~~ig~--~~~~~~~~~~id~~g~~v~PG~ID~H~H~~~~~~~~~---- 122 (331)
.+++|+|++|++++. ..+++|+| +||||++||+ ....+++.++||++|++|+|||||+|+|+..+.....
T Consensus 13 ~~~li~n~~i~~~~~~~~~~~~~v~I~~~g~I~~Vg~~~~~~~~~~~~viD~~G~~v~PG~ID~H~H~~~~~~~~~~~~~ 92 (458)
T 2p9b_A 13 PFALAHATIVTGDKAGTILRNMTIVVGADGRIEQVAPSIETSIPAEYHYLDGTGKIVMPGLINAHTHLFSQGKPLNPKLA 92 (458)
T ss_dssp CEEEEEEEEECCCTTCCEEEEEEEEECTTSBEEEEEEGGGCCCCTTCEEEECTTCEEEECEEEEEECSCC----------
T ss_pred CcEEEEeeEEEeCCCCccccCcEEEEecCCEEEEEeccccCCCCCCCeEEECCCCEEccceeeeeecccccccccccccc
Confidence 568999999999764 24689999 9999999997 4332345689999999999999999999987631100
Q ss_pred -----------Ch---------hhHHHHHHHHHhCCceEEecCcCCCCCcHHHHHHHHHHHhc----cceeecc---ccc
Q 020079 123 -----------TI---------DDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAK----NSCMDYG---FHM 175 (331)
Q Consensus 123 -----------~~---------~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~----~~~~~~~---~~~ 175 (331)
.. ..+....+.++++||||++|+..... ....++...+.+. +...... ...
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~--~~~~~~~~~~~g~~~g~r~~~~g~~~~~~g 170 (458)
T 2p9b_A 93 TPKGQRMVATFAHSPLGKPYMAATVKHNATTLLESGVTTIRTLGDVGY--EVVTLRDQIDAGQILGPRILASGPLMAIPE 170 (458)
T ss_dssp -------------------CHHHHHHHHHHHHHHTTEEEEEESCCSSS--HHHHHHHHHHTTSSCCCEEECCCSCEECCC
T ss_pred chhhhhhhhhhhhhcccccHHHHHHHHHHHHHHHcCCcEEEeCCCCcc--ccHHHHHHHHcCCCCCCeEEecccccccCC
Confidence 11 12344667789999999999864322 2223333333322 1111000 000
Q ss_pred ccc--------CCChhhHHHHHHHHHHhCCCeEEEEEec-----C-----CCCcCCHHHHHHHHHHHHHcCCcEEEEcCC
Q 020079 176 AIT--------KWDEVVSDEMEVMVKEKGINSFKFFMAY-----K-----GSFMINDELLIEGFKRCKSLGALAMVHAEN 237 (331)
Q Consensus 176 ~~~--------~~~~~~~~~~~~~~~~~g~~~ik~~~~~-----~-----~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~ 237 (331)
... ...++..+.++++. +.|.+.+|++... . +.+.++++.++++++.|+++|+++.+|+++
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~ik~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~ 249 (458)
T 2p9b_A 171 GHGAPLIALTSGTPEEARTAVAQNL-KAGVNAIKIAATGGVTDAQEIGEAGSPQMSVEQMRAICDEAHQYGVIVGAHAQS 249 (458)
T ss_dssp SSCCCCEECCSCCHHHHHHHHHHHH-HTTCSCEEEECSCCTTSCCCC------CCCHHHHHHHHHHHHHTTCCEEEEECS
T ss_pred CCCccccCccCCCHHHHHHHHHHHH-HcCCCEEEEEecCCcCCCCccCCCCCCcCCHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 000 11122233444444 5688889988642 1 234678899999999999999999999976
Q ss_pred ch
Q 020079 238 GD 239 (331)
Q Consensus 238 ~~ 239 (331)
..
T Consensus 250 ~~ 251 (458)
T 2p9b_A 250 PE 251 (458)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 42
>2vun_A Enamidase; nicotinate degradation, binuclear metal center, amidohydrolases, stereospecificity, hydrolase; 1.89A {Eubacterium barkeri}
Probab=99.87 E-value=1.9e-20 Score=173.37 Aligned_cols=244 Identities=18% Similarity=0.108 Sum_probs=148.7
Q ss_pred ccEEEECcEE-EeCCC----ceeeeEEEeCCEEEEeeCCCC-CCCC-ceEEeCCCCeeecccccccccccCCCCCCCCh-
Q 020079 53 SKILIKGGTV-VNAHH----QQIADVYVEDGIVVAVQPNIN-VGDD-VKVLDATGKFVMPGGIDPHTHLAMEFMGSETI- 124 (331)
Q Consensus 53 ~~~~i~n~~i-~~~~~----~~~~~v~i~~g~I~~ig~~~~-~~~~-~~~id~~g~~v~PG~ID~H~H~~~~~~~~~~~- 124 (331)
.+++|+|++| ++++. ..+++|+|+||+|++|++... .+++ .++||++|++|+|||||+|+|+..+ +.. +
T Consensus 2 ~~~li~n~~v~~~~~~~~~~~~~~~v~I~~g~I~~Ig~~~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~--~~~-~~ 78 (386)
T 2vun_A 2 SKTIIKNIGKIVSGDIKSPVLQADTIVVEDGLIAAIGGEELMKDAGDATIIDAAGSTVTPGLLDTHVHVSGG--DYA-PR 78 (386)
T ss_dssp CEEEEESCSEEECSCTTSCEECCSEEEEETTEEEEEESGGGGTTCTTCEEEECTTCEEEECEEEEEECCCST--TEE-GG
T ss_pred ccEEEeccEEEEcCCCCccccccceEEEECCEEEEecCccccCCCCCceEEcCCCCEEccceeeccccccCC--CcC-hh
Confidence 5689999999 98764 357899999999999997322 1234 5899999999999999999999753 211 1
Q ss_pred hhHHHHHHHHHhCCceEEecCcCC---CCCcHHHHHH---HHHH---Hhccceeecccccc---ccCCChhhHHHHHHHH
Q 020079 125 DDFFSGQAAALAGGTTMHIDFVIP---INGSLTAGFE---AYEK---KAKNSCMDYGFHMA---ITKWDEVVSDEMEVMV 192 (331)
Q Consensus 125 ~~~~~~~~~~l~~GvTtv~d~~~~---~~~~~~~~~~---~~~~---~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 192 (331)
.......+.++++||||++|+.+. ......+.++ .... .+.+.. ...+..+ ..... ..++++++.
T Consensus 79 ~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~--~~~~~~~~~ 155 (386)
T 2vun_A 79 QKTMDFISSALHGGVTTMISAGSPHFPGRPKDAAGTKALAITLSKSYYNARPA-GVKVHGGAVILEKGL--TEEDFIEMK 155 (386)
T ss_dssp GTEESHHHHHHTTTEEEEEECCCTTSTTCCCSHHHHHHHHHHHHHHHHHCCGG-GCEEECCEECCCTTC--CHHHHHHHH
T ss_pred HHHHHHHHHHHhCCceEEEeccccccCCChhhHHHHHHHHHHhhccccccccc-ceeeccCcccccCCc--CHHHHHHHH
Confidence 011125788899999999998631 1111111222 1111 111100 0001111 11111 135677776
Q ss_pred HHhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEcC-------CchhhHHHHHHHHHcCCCCcccccccCCh
Q 020079 193 KEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAE-------NGDAVFEGQKRMIELGITGPEGHALSRPP 265 (331)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e-------~~~~~~~~~~~~~~~G~~~~~~~~~~~~~ 265 (331)
+.|...+|.+... ..++++.++++++.|+++|+++.+|++ +.+.+. .+.+.|... -.|+...+.
T Consensus 156 -~~g~~~ik~~~~~---~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~i~----~~~~~G~~~-i~H~~~~~~ 226 (386)
T 2vun_A 156 -KEGVWIVGEVGLG---TIKNPEDAAPMVEWAHKHGFKVQMHTGGTSIPGSSTVTAD----DVIKTKPDV-VSHINGGPT 226 (386)
T ss_dssp -HTTCCEEEEETSS---SCCSHHHHHHHHHHHHHTTCEEEEECSCCSCSTTCSCCHH----HHHHHCCSE-EETTTCSSS
T ss_pred -HhCCCeEEEeecC---CCCCHHHHHHHHHHHHHCCCeEEEecCCccccccCHHHHH----HHHHcCCCE-EEEccCCCC
Confidence 5788889886422 235899999999999999999999984 333332 233456542 233322110
Q ss_pred HHHHHHHHHHHHHHHhcCCCE-EEEeCC-CHHHHHHHHHHHHcCC--CEEEecC
Q 020079 266 LLEGEATTRAIRLAEFVNTPL-YVVHVM-SMDAMEEIAKARKAGP--NFLNTTI 315 (331)
Q Consensus 266 ~~e~~~i~~~~~l~~~~g~~~-~i~H~~-~~~~~~~i~~~~~~Gi--~v~~~~~ 315 (331)
... .+.++.+.+.|+.+ .+.+.. .....+.++++.+.|+ ++..+|.
T Consensus 227 ~~~----~~~~~~~~~~g~~vl~~~~~g~~~~~~~~~~~~~~~g~~d~v~lgTD 276 (386)
T 2vun_A 227 AIS----VQEVDRIMDETDFAMEIVQCGNPKIADYVARRAAEKGQLGRVIFGND 276 (386)
T ss_dssp CCC----HHHHHHHHHHCCCEEEEESSSCHHHHHHHHHHHHHHTCGGGEEEECC
T ss_pred CCC----HHHHHHHHHcCCeEEEeccCCcccccHHHHHHHHHcCCCceeEEecC
Confidence 011 12345555668776 333333 3445678899999999 8876654
No 43
>2ogj_A Dihydroorotase; TIM barrel, binuclear zinc, imidazole complex, amido hydrola 9244B, structural genomics, PSI-2; HET: KCX; 2.62A {Agrobacterium tumefaciens}
Probab=99.86 E-value=3.1e-22 Score=187.56 Aligned_cols=257 Identities=18% Similarity=0.122 Sum_probs=147.1
Q ss_pred CCccEEEECcEEEeCCC---ceeeeEEEe-CCEEEEeeCCCCCCCCceEEeCCCCeeecccccccccccCCCCCCCChhh
Q 020079 51 SSSKILIKGGTVVNAHH---QQIADVYVE-DGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDD 126 (331)
Q Consensus 51 ~~~~~~i~n~~i~~~~~---~~~~~v~i~-~g~I~~ig~~~~~~~~~~~id~~g~~v~PG~ID~H~H~~~~~~~~~~~~~ 126 (331)
|+.+++|+|++|++++. ..+++|+|+ ||||++|++....+++.++||++|++|+|||||+|+|+..+.. ...+.
T Consensus 13 ~~~~~li~n~~vv~~~~~~~~~~~~v~I~~~g~I~~Ig~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~~~--~~~~~ 90 (417)
T 2ogj_A 13 LQAPILLTNVKPVGFGKGASQSSTDILIGGDGKIAAVGSALQAPADTQRIDAKGAFISPGWVDLHVHIWHGGT--DISIR 90 (417)
T ss_dssp -CCCEEEEEEEECSSCTTCCCSCEEEEECTTSBEEEEETTCCCSSCEEECCC--CEEEECEEEEEECCCBTTB--SSCCC
T ss_pred CCCcEEEECCEEEcCCCCccCccceEEEecCCEEEEeccCCCCCCCCeEEECCCCEEccCeeecccccccccc--ccCCC
Confidence 44679999999998764 368899999 9999999985433334689999999999999999999987621 11111
Q ss_pred HHHHHHHHHhCCceEEecCcCCCCCcHHHHHHHHHHHhc---cceeecccccccc-----CC---ChhhHHHHHHHHHHh
Q 020079 127 FFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAK---NSCMDYGFHMAIT-----KW---DEVVSDEMEVMVKEK 195 (331)
Q Consensus 127 ~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-----~~---~~~~~~~~~~~~~~~ 195 (331)
..+.++++||||++|+....+.......+...+... +..+++...+... .. .....++++++.++.
T Consensus 91 ---~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~G~~~~~~~~e~~~~~~~~~~~~~~~~~~~ 167 (417)
T 2ogj_A 91 ---PSECGAERGVTTLVDAGSAGEANFHGFREYIIEPSRERIKAFLNLGSIGLVACNRVPELRDIKDIDLDRILECYAEN 167 (417)
T ss_dssp ---GGGTSGGGTEEEEEEESSCCSTTHHHHHHHTTTTCSSEEEEEEESSTTTTTTTTTSCSCSSGGGCCHHHHHHHHHTC
T ss_pred ---HHHHHHhCCcCeEEeCCcCCCcCHHHHHHHHhhccccCeEEEeccccCcCCCCCCcccccchhhcCHHHHHHHHHhC
Confidence 123578999999999864433222222221222211 1222221111000 00 011234555555332
Q ss_pred --CCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEcCC-chhhHHHHHHHHHcCCCCccccccc-CCh--HHHH
Q 020079 196 --GINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAEN-GDAVFEGQKRMIELGITGPEGHALS-RPP--LLEG 269 (331)
Q Consensus 196 --g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~-~~~~~~~~~~~~~~G~~~~~~~~~~-~~~--~~e~ 269 (331)
+...+|.++++.....++.+.++++++.|+++|+++.+|+++ ....+..... .+.| ....|+.. .+. ..+.
T Consensus 168 ~~~~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~-l~~g--~~~~H~~~~~~~~~~~~~ 244 (417)
T 2ogj_A 168 SEHIVGLKVRASHVITGSWGVTPVKLGKKIAKILKVPMMVHVGEPPALYDEVLEI-LGPG--DVVTHCFNGKSGSSIMED 244 (417)
T ss_dssp TTTEEEEEEEESHHHHTTCTTHHHHHHHHHHHHHTCCEEEEECSSSSCHHHHHHH-CCTT--CEEETTTCCCTTTCTTSC
T ss_pred CCceEEEEEEecCCccccccHHHHHHHHHHHHHcCCcEEEEcCCCcccHHHHHHH-hcCC--CEEEeccCCCccchhccC
Confidence 345678877654334467788899999999999999999864 3222222221 1223 11122211 110 0011
Q ss_pred HHHHHHHHHHHhcCCCEEEEeCCCHHHHHHHHHHHHcC-CCEEEecC
Q 020079 270 EATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAG-PNFLNTTI 315 (331)
Q Consensus 270 ~~i~~~~~l~~~~g~~~~i~H~~~~~~~~~i~~~~~~G-i~v~~~~~ 315 (331)
....+.+..+.+.|+.+.+++.........++.+.++| +++..++.
T Consensus 245 ~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~G~~~~~lgtD 291 (417)
T 2ogj_A 245 EDLFNLAERCAGEGIRLDIGHGGASFSFKVAEAAIARGLLPFSISTD 291 (417)
T ss_dssp HHHHHHHHHC--CCCEEECCBCSSSCCHHHHHHHHHTTCCCSBCCBC
T ss_pred HHHHHHHHHHHhcCcEEEecCCCccccchHHHHHHHcCCCceEEEcC
Confidence 11334455556677766666654434457788899999 87665443
No 44
>4ubp_C Protein (urease (chain C)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.92.1.1 c.1.9.2 PDB: 1s3t_C* 2ubp_C* 3ubp_C* 1ubp_C* 1ie7_C*
Probab=99.86 E-value=3.6e-21 Score=184.12 Aligned_cols=170 Identities=18% Similarity=0.201 Sum_probs=129.9
Q ss_pred CccEEEECcEEEeCCCceeeeEEEeCCEEEEeeCCCCC------------CCCceEEeCCCCeeecccccccccccCCCC
Q 020079 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINV------------GDDVKVLDATGKFVMPGGIDPHTHLAMEFM 119 (331)
Q Consensus 52 ~~~~~i~n~~i~~~~~~~~~~v~i~~g~I~~ig~~~~~------------~~~~~~id~~g~~v~PG~ID~H~H~~~~~~ 119 (331)
..+++|+|++|+++.+...++|+|+||||++|++.... .++.++||++|++|+|||||+|+|+..+
T Consensus 66 ~~dllI~n~~vvd~~g~~~~dI~I~dG~I~~Ig~~~~~~~~~~v~~~~~~~~~~~vIDa~G~~v~PG~ID~HvH~~~P-- 143 (570)
T 4ubp_C 66 VLDLLLTNALILDYTGIYKADIGVKDGYIVGIGKGGNPDIMDGVTPNMIVGTATEVIAAEGKIVTAGGIDTHVHFINP-- 143 (570)
T ss_dssp BCSEEEEEEEEEETTEEEEEEEEEETTEEEEEECCBCTTTCTTCCTTCBCCTTCEEEECTTCEEEECEEEEEEECCCT--
T ss_pred CCCEEEECeEEECCCCcEEEEEEEECCEEEEeecCCCccccccccccccCCCCceEEeCCCCEEeeCEEEcccCCCCc--
Confidence 46899999999998777889999999999999985321 2356899999999999999999999766
Q ss_pred CCCChhhHHHHHHHHHhCCceEEecCcCCC-------CC-cHHHHHHHHHHHhccceeeccccccccCCChhhHHHHHHH
Q 020079 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPI-------NG-SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVM 191 (331)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~-------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (331)
+. .+.++++||||+++.+... +. .....++...+.....++++.++..... ..++++.++
T Consensus 144 g~---------~~aAl~gGvTTvv~gg~~p~~~~n~~p~~~~~~~l~~~l~aa~~~~v~~~~~g~~~~---~~l~el~el 211 (570)
T 4ubp_C 144 DQ---------VDVALANGITTLFGGGTGPAEGSKATTVTPGPWNIEKMLKSTEGLPINVGILGKGHG---SSIAPIMEQ 211 (570)
T ss_dssp TH---------HHHHHHTTEEEEEEECCSSCHHHHHSSCCCHHHHHHHHHHHHTTCSSEEEEEEECCC---SSHHHHHHH
T ss_pred ch---------HHHHHhcCCeEEEecCccccccCCCcCCCCcHHHHHHHHHHhhhCCeeEEEEeccCC---cCHHHHHHH
Confidence 21 3678999999999643211 11 2344555555555566777777654322 245677777
Q ss_pred HHHhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEcCCchh
Q 020079 192 VKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDA 240 (331)
Q Consensus 192 ~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~ 240 (331)
. +.|+.++|.+..+ ..+++.++++++.|+++|+++.+|+++..+
T Consensus 212 ~-~aGa~gfK~~~~~----~~~~~~L~~aL~~A~~~g~~V~iHae~l~e 255 (570)
T 4ubp_C 212 I-DAGAAGLKIHEDW----GATPASIDRSLTVADEADVQVAIHSDTLNE 255 (570)
T ss_dssp H-HHTCCEEEEEGGG----CCCHHHHHHHHHHHHHHTCEEEEECCTTCS
T ss_pred H-HcCCCeEeeccCC----CCCHHHHHHHHHHHHHcCCEEEEEcCCcch
Confidence 7 7899999988654 358999999999999999999999986544
No 45
>4ac7_C Urease subunit alpha; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_C* 2ubp_C* 3ubp_C* 1ubp_C* 4ubp_C* 1ie7_C*
Probab=99.86 E-value=3.6e-21 Score=184.12 Aligned_cols=170 Identities=18% Similarity=0.201 Sum_probs=129.9
Q ss_pred CccEEEECcEEEeCCCceeeeEEEeCCEEEEeeCCCCC------------CCCceEEeCCCCeeecccccccccccCCCC
Q 020079 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINV------------GDDVKVLDATGKFVMPGGIDPHTHLAMEFM 119 (331)
Q Consensus 52 ~~~~~i~n~~i~~~~~~~~~~v~i~~g~I~~ig~~~~~------------~~~~~~id~~g~~v~PG~ID~H~H~~~~~~ 119 (331)
..+++|+|++|+++.+...++|+|+||||++|++.... .++.++||++|++|+|||||+|+|+..+
T Consensus 66 ~~dllI~n~~vvd~~g~~~~dI~I~dG~I~~Ig~~~~~~~~~~v~~~~~~~~~~~vIDa~G~~v~PG~ID~HvH~~~P-- 143 (570)
T 4ac7_C 66 VLDLLLTNALILDYTGIYKADIGVKDGYIVGIGKGGNPDIMDGVTPNMIVGTATEVIAAEGKIVTAGGIDTHVHFINP-- 143 (570)
T ss_dssp BCSEEEEEEEEEETTEEEEEEEEEETTEEEEEECCBCTTTCSSCCTTCBCCTTCEEEECTTCEEEECEEEEEEECCCT--
T ss_pred CCCEEEECeEEECCCCcEEEEEEEECCEEEEeecCCCccccccccccccCCCCceEEeCCCCEEeeCEEecccccCCc--
Confidence 46899999999998777889999999999999985321 2356899999999999999999999766
Q ss_pred CCCChhhHHHHHHHHHhCCceEEecCcCCC-------CC-cHHHHHHHHHHHhccceeeccccccccCCChhhHHHHHHH
Q 020079 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPI-------NG-SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVM 191 (331)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~-------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (331)
+. .+.++++||||+++.+... +. .....++...+.....++++.++..... ..++++.++
T Consensus 144 g~---------~~aAl~gGvTTvv~gg~~p~~~~n~~p~~~~~~~l~~~l~aa~~~~v~~~~~g~~~~---~~l~el~el 211 (570)
T 4ac7_C 144 DQ---------VDVALANGITTLFGGGTGPAEGSKATTVTPGPWNIEKMLKSTEGLPINVGILGKGHG---SSIAPIMEQ 211 (570)
T ss_dssp TH---------HHHHHHTTEEEEEEECSSSCHHHHHSSCCCHHHHHHHHHHHHTTCSSEEEEEEECCC---SSHHHHHHH
T ss_pred ch---------HHHHHhcCCeEEEecCcCcccccCCcCcCCcHHHHHHHHHHhhhCCeeEEEEeccCC---cCHHHHHHH
Confidence 21 3678999999999643211 11 2344555555555566777777654322 245677777
Q ss_pred HHHhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEcCCchh
Q 020079 192 VKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDA 240 (331)
Q Consensus 192 ~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~ 240 (331)
. +.|+.++|.+..+ ..+++.++++++.|+++|+++.+|+++..+
T Consensus 212 ~-~aGa~gfK~~~~~----~~~~~~L~~aL~~A~~~g~~V~iHae~l~e 255 (570)
T 4ac7_C 212 I-DAGAAGLKIHEDW----GATPASIDRSLTVADEADVQVAIHSDTLNE 255 (570)
T ss_dssp H-HHTCCEEEEEGGG----CCCHHHHHHHHHHHHHHTCEEEEECCTTCS
T ss_pred H-HcCCCeEeeccCC----CCCHHHHHHHHHHHHHcCCEEEEEcCCcch
Confidence 7 7899999988654 358999999999999999999999986544
No 46
>4f0l_A Amidohydrolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Brucella melitensis biovar abortus}
Probab=99.84 E-value=5.2e-21 Score=181.36 Aligned_cols=251 Identities=12% Similarity=0.014 Sum_probs=153.5
Q ss_pred CccEEEECcEEEeCCCceeeeEEEeCCEEEEeeCCCCCCCCceEEeCCCCeeecccccccccccCCCC-C----------
Q 020079 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFM-G---------- 120 (331)
Q Consensus 52 ~~~~~i~n~~i~~~~~~~~~~v~i~~g~I~~ig~~~~~~~~~~~id~~g~~v~PG~ID~H~H~~~~~~-~---------- 120 (331)
|.+++++|+.+.+ ...++++|+|+||||++||+... .++||++|++|+|||||+|+|+.+... +
T Consensus 11 m~~l~~~~~~~~~-~~~~~~~v~I~~g~I~~Ig~~~~----~~~iD~~g~~v~PGlID~H~H~~~~~~rg~~~~~~~~~~ 85 (458)
T 4f0l_A 11 QHFIHARQALLPD-GWAENVRIGIAGGVICSIETGVL----AGPDDERQSVVVAGMANLHSHAFQYGMAGLAERRGPSAD 85 (458)
T ss_dssp CEEEEEEEEEETT-EEEEEEEEEEETTEEEEEECSCC----CCTTCEEEEEEEECEEEEEECGGGGGGTTSSCBCCSCSS
T ss_pred hhHhhhcceeccC-ccccCceEEEECCEEEEEeCCCc----cccccCCCCEEccCceecccchhhhhhcccccccccCCC
Confidence 3467788887632 22578999999999999998653 356999999999999999999964421 0
Q ss_pred --------------CCChhhHHHH----HHHHHhCCceEEecCcCCCC-------Cc----HHHHHHHHHHHhccceeec
Q 020079 121 --------------SETIDDFFSG----QAAALAGGTTMHIDFVIPIN-------GS----LTAGFEAYEKKAKNSCMDY 171 (331)
Q Consensus 121 --------------~~~~~~~~~~----~~~~l~~GvTtv~d~~~~~~-------~~----~~~~~~~~~~~~~~~~~~~ 171 (331)
..++++++.. ...++++||||+.|+..... .. ....++...+.+.+..+..
T Consensus 86 ~~~~w~~~~~~~~~~~~~e~~~~~~~~~~~e~l~~GvTtv~d~~~~~~~~~g~~~~~~~~~~~~~~~a~~~~g~r~~~~~ 165 (458)
T 4f0l_A 86 SFWSWREIMYKFALTMTPEQAEAVALRLYVDMLEAGFTRVGEFHYLHHDCDGTPYANLSEMADRIAAAATTAGMGLTLLP 165 (458)
T ss_dssp TTHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTTEEEEEEEECCCSCTTSCCCSSTTHHHHHHHHHHHHHTCEEEEEE
T ss_pred cHHHHHHHhhhhhhhCCHHHHHHHHHHHHHHHHhcCCcEEEeeeeeccccccccccchhhhHHHHHHHHHHcCCeEEEec
Confidence 0133444433 33468899999999743211 01 2234444555554433221
Q ss_pred cccc--------c------ccCCChhhHHHHHHHHHH-hCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEc-
Q 020079 172 GFHM--------A------ITKWDEVVSDEMEVMVKE-KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA- 235 (331)
Q Consensus 172 ~~~~--------~------~~~~~~~~~~~~~~~~~~-~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~- 235 (331)
.+.. + .....++..+.++++.+. .+...+++.+.++..+.++++.++++++.|+ |+++++|+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~--g~~v~~H~~ 243 (458)
T 4f0l_A 166 VFYAHSGFGGAAANEGQRRFINDPERFARLIEGCRKTLEGFEGAVLGVAPHSLRAVTPDELDSVTQLLP--DAPVHIHVA 243 (458)
T ss_dssp EECCEEETTTEECCGGGTTTCCCHHHHHHHHHHHHHHHTTCTTCEECBEECBTTTSCHHHHHHHTTSST--TSCEEEEES
T ss_pred chhccccccccCCchhhhhhhcCHHHHHHHHHHHHHHhccCCceEEEEecCCcCcCCHHHHHHHHHHhc--CCCEEEEeC
Confidence 1100 0 011112233333343322 2334456666778888899999999999998 99999996
Q ss_pred CCchhhHHHH--------HHHHHcCCCCcccccccCChHHHHHHHHHHHHHHHhcCCCEEEEeCCCH-----HHHHHHHH
Q 020079 236 ENGDAVFEGQ--------KRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSM-----DAMEEIAK 302 (331)
Q Consensus 236 e~~~~~~~~~--------~~~~~~G~~~~~~~~~~~~~~~e~~~i~~~~~l~~~~g~~~~i~H~~~~-----~~~~~i~~ 302 (331)
|+..+.+... +.+.+.|.++++....+..... ++.++++.+.|+. ++||+.. ..+..++.
T Consensus 244 e~~~~~~~~~~~~g~~~~~~l~~~g~l~~~~~~~H~~~~~-----~~~~~~l~~~g~~--~~~~p~s~~~l~~~~~~~~~ 316 (458)
T 4f0l_A 244 EQVKEVEDCIAWSGKRPVEWLLDHQDVTARWCLIHATHMS-----DEETKHMAKAGAI--AGLCPVTEANLGDGTFNATE 316 (458)
T ss_dssp CSHHHHHHHHHHHSSCHHHHHHHHSCCCTTEEEEECCSCC-----HHHHHHHHHHTCE--EEECHHHHHHTTCCCCCHHH
T ss_pred CCHHHHHHHHHHhCCCHHHHHHHcCCCCCCeEEEEeccCC-----HHHHHHHHHcCCe--EEECccccccccCCCccHHH
Confidence 6766665554 3456778777654333322111 1234555666665 5555432 22346888
Q ss_pred HHHcCCCEEEecCC
Q 020079 303 ARKAGPNFLNTTIP 316 (331)
Q Consensus 303 ~~~~Gi~v~~~~~p 316 (331)
+.++|++++.++..
T Consensus 317 ~~~~Gv~v~lgtD~ 330 (458)
T 4f0l_A 317 FAAAGGKFGIGSDS 330 (458)
T ss_dssp HHHTTCEEEECCBT
T ss_pred HHHCCCeEEEECCC
Confidence 99999999987774
No 47
>3nqb_A Adenine deaminase 2; PSI-II, structural genomics, protein structure initiative, N SGX research center for structural genomics, nysgxrc; 2.21A {Agrobacterium tumefaciens} PDB: 3t81_A 3t8l_A
Probab=99.84 E-value=4.1e-20 Score=180.38 Aligned_cols=244 Identities=17% Similarity=0.144 Sum_probs=154.8
Q ss_pred CCccEEEECcEEEeCCC--ceeeeEEEeCCEEEEeeCCCCCCCCceEEeCCCCeeecccccccccccCCCCCCCChhhHH
Q 020079 51 SSSKILIKGGTVVNAHH--QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFF 128 (331)
Q Consensus 51 ~~~~~~i~n~~i~~~~~--~~~~~v~i~~g~I~~ig~~~~~~~~~~~id~~g~~v~PG~ID~H~H~~~~~~~~~~~~~~~ 128 (331)
++++++|+|++|+++.. ...++|+|+||||++|++.....++.++||++|++|+|||||+|+|+..+ ..+++.+
T Consensus 33 ~~~dlli~n~~ivd~~~~~~~~~dI~I~~G~I~~Vg~~~~~~~~~~vID~~G~~v~PG~ID~H~Hl~~~---~~~~~~~- 108 (608)
T 3nqb_A 33 QRFDVLITGGTLVDVVTGELRPADIGIVGALIASVHEPASRRDAAQVIDAGGAYVSPGLIDTHMHIESS---MITPAAY- 108 (608)
T ss_dssp SCEEEEEESCEEECTTTCCEEECEEEEETTEEEEEECTTSCCCEEEEEECTTSEEEECEEEEEECGGGG---TSCHHHH-
T ss_pred CCCCEEEECeEEEECCCCeEEeeEEEEECCEEEEecCCCCCCCCCeEEeCCCCEEecCeEecccCcccc---cCCHHHH-
Confidence 35689999999999763 56789999999999999865334467899999999999999999999765 2344444
Q ss_pred HHHHHHHhCCceEEecCcCCCCC-cHHHHHHHHHHHhccceeeccccc----cc---cC--CChhhHHHHHHHHHHhCCC
Q 020079 129 SGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMDYGFHM----AI---TK--WDEVVSDEMEVMVKEKGIN 198 (331)
Q Consensus 129 ~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~----~~---~~--~~~~~~~~~~~~~~~~g~~ 198 (331)
.+.++.+||||++++...... ...+.++...+.....+.++.+.. +. .. ......++++++.+..++.
T Consensus 109 --~~~al~~GvTtvv~~p~~~~~v~g~~~~~~~l~~a~~~~~~v~~~~p~~~P~~~~~~~~g~~~~~~el~~l~~~~~v~ 186 (608)
T 3nqb_A 109 --AAAVVARGVTTIVWDPHEFGNVHGVDGVRWAAKAIENLPLRAILLAPSCVPSAPGLERGGADFDAAILADLLSWPEIG 186 (608)
T ss_dssp --HHHHHTTTEEEEEECCHHHHHHHTHHHHHHHHHHHTTCSSEEEEEECCCSSSSTTSCCCSCCCCHHHHHHHHTSTTEE
T ss_pred --HHHHHhCCeEEEEcCCccccccCCHHHHHHHHHHhhhcCcEEEEeccccCCCCCccccCcccCCHHHHHHHHhccCcc
Confidence 678899999999975321111 123344444444433333332221 10 00 1112356777777446777
Q ss_pred eEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHH
Q 020079 199 SFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRL 278 (331)
Q Consensus 199 ~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~e~~~i~~~~~l 278 (331)
+++.++++.+. ..+++.+.+.++.|+++|+++.+|+++... .....+.+.|... .|. +... ++..+.
T Consensus 187 glgE~~~~~~v-~~~d~~l~~~l~~A~~~g~pV~~Ha~~~~~--~~L~~~~~aGv~~--~H~---~~~~-----eea~e~ 253 (608)
T 3nqb_A 187 GIAEIMNMRGV-IERDPRMSGIVQAGLAAEKLVCGHARGLKN--ADLNAFMAAGVSS--DHE---LVSG-----EDLMAK 253 (608)
T ss_dssp EEEEECCHHHH-HTTCHHHHHHHHHHHHHTCEEEECCTTCCH--HHHHHHHHTTCCE--ECC---CCSH-----HHHHHH
T ss_pred eeeEeeccCCc-CCCcHHHHHHHHHHHHcCCEEEEcCCCCCH--HHHHHHHHcCCCe--eec---cCCH-----HHHHHH
Confidence 88877655322 235678889999999999999999865433 2234455667654 222 1111 222233
Q ss_pred HHhcCCCEEEEeCCCHHHHHHHHHHH----HcCCCEEEecC
Q 020079 279 AEFVNTPLYVVHVMSMDAMEEIAKAR----KAGPNFLNTTI 315 (331)
Q Consensus 279 ~~~~g~~~~i~H~~~~~~~~~i~~~~----~~Gi~v~~~~~ 315 (331)
++ .|..+.+. .+.....+.+..+. ..|.++..+|.
T Consensus 254 l~-~G~~i~i~-gs~~~~~~~l~~~i~~~~~~g~~v~lgTD 292 (608)
T 3nqb_A 254 LR-AGLTIELR-GSHDHLLPEFVAALNTLGHLPQTVTLCTD 292 (608)
T ss_dssp HH-TTCEEEEE-SSSGGGHHHHHHHHHHHTSCCTTEEEECB
T ss_pred HH-CCCEEEEe-ccccccHHHHHHHHHhHhhcCceEEEecC
Confidence 32 47777676 55544434443333 37899988776
No 48
>2z26_A Dihydroorotase, dhoase; TIM barrel, hydrolase; HET: KCX DOR NCD; 1.29A {Escherichia coli} PDB: 2z24_A* 2z25_A* 2eg6_A* 1xge_A* 2eg7_A* 2eg8_A* 2z27_A* 2e25_A* 2z28_A* 2z29_A* 3mjm_A* 2z2a_A* 1j79_A* 2z2b_A* 3ihn_A* 3jze_A*
Probab=99.83 E-value=7.2e-21 Score=173.99 Aligned_cols=192 Identities=15% Similarity=0.090 Sum_probs=133.4
Q ss_pred CCCeeecccccccccccCCCCCCCChhhHHHHHHHHHhCCceEEecCcCCCCC-cHHHHHHHHHHHhc-cce--eecccc
Q 020079 99 TGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAK-NSC--MDYGFH 174 (331)
Q Consensus 99 ~g~~v~PG~ID~H~H~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~-~~~--~~~~~~ 174 (331)
++++|+||+||.|+|+... ....+.+.++++||||++||.+..+. ...+.+..+.+... ... +++...
T Consensus 4 ~~~~v~PG~ID~HvH~~~g--------~~~~e~~aa~~gGvTtvv~mpnt~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (347)
T 2z26_A 4 SQVLKIRRPDDWHLHLRDG--------DMLKTVVPYTSEIYGRAIVMPNLAPPVTTVEAAVAYRQRILDAVPAGHDFTPL 75 (347)
T ss_dssp CCEEEEECCCEEEECCCSH--------HHHHHHHHHHHTTCSEEEECCCCSSCCCSHHHHHHHHHHHHHTSCTTCCCEEE
T ss_pred CCeEECCCcceeeecCCCC--------CchhhHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHhcccCCcccEEEE
Confidence 4679999999999999762 11234577899999999999754443 33444444444332 223 233222
Q ss_pred ccccCCChhhHHHHHHHHHHhCC-CeEEEEEecC----CCCcCCHHHHHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHH
Q 020079 175 MAITKWDEVVSDEMEVMVKEKGI-NSFKFFMAYK----GSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMI 249 (331)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~g~-~~ik~~~~~~----~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~ 249 (331)
+......+...+++..+. +.|+ .++|+|+.+. +....+.+.+.++++.+++.|.++.+|+|+....
T Consensus 76 ~~~~~~~~~~~~ei~~l~-~~G~~~g~K~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~vH~ed~~~~-------- 146 (347)
T 2z26_A 76 MTCYLTDSLDPNELERGF-NEGVFTAAKLYPANATANSSHGVTSVDAIMPVLERMEKIGMPLLVHGEVTHAD-------- 146 (347)
T ss_dssp EEEECCTTCCHHHHHHHH-HTTSEEEEEECCCCTTCCTTTCCSCGGGGHHHHHHHHHHTCCEEECCCCCCTT--------
T ss_pred EEEEeCCCCCHHHHHHHH-HCCCeEEEEEeecCCcCCCCCccCCHHHHHHHHHHHHHhCCEEEEEecCCccc--------
Confidence 332112222367787777 6897 7999998753 2233577899999999999999999999876411
Q ss_pred HcCCCCcccccccCChHHHHHHHHHHH--HHHHhcCCCEEEEeCCCHHHHHHHHHHHHcCCCEEEecCCccccch
Q 020079 250 ELGITGPEGHALSRPPLLEGEATTRAI--RLAEFVNTPLYVVHVMSMDAMEEIAKARKAGPNFLNTTIPLCDSCS 322 (331)
Q Consensus 250 ~~G~~~~~~~~~~~~~~~e~~~i~~~~--~l~~~~g~~~~i~H~~~~~~~~~i~~~~~~Gi~v~~~~~p~~~~~~ 322 (331)
. .+...|..++.+.+ .+++..|.++|++|+++.++++.++++| .+|++++||||+.++
T Consensus 147 ----~--------~~~~~E~~~~~~~i~~~la~~~~~~~hi~Hvst~~~~~~i~~ak---~~Vt~e~~ph~L~l~ 206 (347)
T 2z26_A 147 ----I--------DIFDREARFIESVMEPLRQRLTALKVVFEHITTKDAADYVRDGN---ERLAATITPQHLMFN 206 (347)
T ss_dssp ----S--------CGGGHHHHHHHHTHHHHHHHSTTCCEEECSCCSHHHHHHHHTSC---TTEEEEECHHHHHCC
T ss_pred ----c--------CHHHHHHHHHHHHHHHHHHhhcCCcEEEEECCcHHHHHHHHHhC---CCceEeecchHheec
Confidence 0 01123455677777 5788889999999999999988888775 589999999998764
No 49
>3mdu_A N-formimino-L-glutamate iminohydrolase; amonohydralase family, N-formimino-L-glutamate iminohydrolas guanidino-L-glutamate; HET: NGQ; 1.40A {Pseudomonas aeruginosa} PDB: 3mdw_A*
Probab=99.82 E-value=5e-20 Score=174.45 Aligned_cols=245 Identities=11% Similarity=0.027 Sum_probs=151.8
Q ss_pred EECcEEEeCCC-ceeeeEEE-eCCEEEEeeCCCCCCCCceEEeCCCCeeecccccccccccCCCCC--------------
Q 020079 57 IKGGTVVNAHH-QQIADVYV-EDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMG-------------- 120 (331)
Q Consensus 57 i~n~~i~~~~~-~~~~~v~i-~~g~I~~ig~~~~~~~~~~~id~~g~~v~PG~ID~H~H~~~~~~~-------------- 120 (331)
+...+++.+++ .++++|+| +||+|++|++.... .+++|++| +|+|||||+|+|+.+....
T Consensus 4 ~~~~~~~~~~~~~~~~~v~i~~~g~I~~ig~~~~~---~~~~d~~g-~v~PGfId~H~H~~~~~~rg~~~~~~~~~~~l~ 79 (453)
T 3mdu_A 4 IFAERALLPEGWARNVRFEISADGVLAEIRPDANA---DGAERLGG-AVLPGMPNLHSHAFQRAMAGLAEVAGNPNDSFW 79 (453)
T ss_dssp EEEEEEEETTEEEEEEEEEECTTSBEEEEESSCCC---TTSEECSS-CEEECEEEEEECGGGGGGTTTTCCCSSTTCCHH
T ss_pred cchhheecCCceecCeEEEEecCCEEEEecCCCCc---ccccccCC-cccccceecccchHHHhhccccccccCCCCcHH
Confidence 34556666665 57899999 89999999986542 24679999 9999999999999654211
Q ss_pred -----------CCChhhHHHHH----HHHHhCCceEEecCcCCCC-------C----cHHHHHHHHHHHhccceeecccc
Q 020079 121 -----------SETIDDFFSGQ----AAALAGGTTMHIDFVIPIN-------G----SLTAGFEAYEKKAKNSCMDYGFH 174 (331)
Q Consensus 121 -----------~~~~~~~~~~~----~~~l~~GvTtv~d~~~~~~-------~----~~~~~~~~~~~~~~~~~~~~~~~ 174 (331)
..++++++..+ ..++++||||+.|+..... . .....++..++.+.+..+...+.
T Consensus 80 ~wl~~~~~~~~~~~~e~~~~~a~~~~~e~l~~GvTtv~d~~~~~~~~~g~~~~~~~~~~~~~~~a~~~~Gir~~~~~~~~ 159 (453)
T 3mdu_A 80 TWRELMYRMVARLSPEQIEVIACQLYIEMLKAGYTAVAEFHYVHHDLDGRSYADPAELSLRISRAASAAGIGLTLLPVLY 159 (453)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHTEEEEEEEECCCSCTTSCCCSSTTHHHHHHHHHHHHHTCEEEEEECBC
T ss_pred HHHHHHhhhhhhCCHHHHHHHHHHHHHHHHHcCCcEEEEeeEeccccccccccchhhHHHHHHHHHHHhCCeEEEecchh
Confidence 12445554443 3478899999999743211 0 12344555555565533221110
Q ss_pred --ccc------------cCCChhhHHHHHHHHH---HhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEc-C
Q 020079 175 --MAI------------TKWDEVVSDEMEVMVK---EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA-E 236 (331)
Q Consensus 175 --~~~------------~~~~~~~~~~~~~~~~---~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~-e 236 (331)
.+. ....++..+.++++.+ ..+. +..+++++.+.++++.++++++.|+ .|+++++|+ |
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~p~~~~~~~~e~l~~~~~~A~-~g~~v~~H~~e 235 (453)
T 3mdu_A 160 SHAGFGGQPASEGQRRFINGSEAYLELLQRLRAPLEAAGH---SLGLCFHSLRAVTPQQIATVLAAGH-DDLPVHIHIAE 235 (453)
T ss_dssp CBSSTTTCBCCGGGGGGCCCHHHHHHHHHHHHHHHHHHTC---EECEEEEETTTSCHHHHHHHHTSSC-TTSCEEEEESC
T ss_pred ccccccCCCCchhhhhccCCHHHHHHHHHHHHHHhhcCCC---eEEEecCCCCcCCHHHHHHHHHHHh-cCCCEEEEeCC
Confidence 000 0111223333333332 2232 4556777788899999999999999 999999995 7
Q ss_pred CchhhHHHH--------HHHHHcCCCCcccccccCChHHHHHHHHHHHHHHHhcCCCEEEEeCCCH-----HHHHHHHHH
Q 020079 237 NGDAVFEGQ--------KRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSM-----DAMEEIAKA 303 (331)
Q Consensus 237 ~~~~~~~~~--------~~~~~~G~~~~~~~~~~~~~~~e~~~i~~~~~l~~~~g~~~~i~H~~~~-----~~~~~i~~~ 303 (331)
+..++.... +.+.+.|.++++....+..... ++.++++++.|+. ++||+.. .....++.+
T Consensus 236 ~~~e~~~~~~~~g~~~v~~l~~~g~~~~~~~~~H~~~~~-----~~~i~~la~~g~~--v~~~P~sn~~lg~g~~p~~~~ 308 (453)
T 3mdu_A 236 QQKEVDDCQAWSGRRPLQWLYENVAVDQRWCLVHATHAD-----PAEVAAMARSGAV--AGLCLSTEANLGDGIFPATDF 308 (453)
T ss_dssp SHHHHHHHHHHHSSCHHHHHHHHSCCCTTEEEEECCSCC-----HHHHHHHHHHTCE--EEECHHHHHHTTCCCCCHHHH
T ss_pred CHHHHHHHHHHhCCCHHHHHHHcCCCCCCeEEEEcCCCC-----HHHHHHHHHcCCE--EEECchhHhhcCCCCCCHHHH
Confidence 776666544 3467778777654333322221 1234566666765 5555432 234567888
Q ss_pred HHcCCCEEEecCC
Q 020079 304 RKAGPNFLNTTIP 316 (331)
Q Consensus 304 ~~~Gi~v~~~~~p 316 (331)
.++|++|+.++..
T Consensus 309 ~~~Gv~v~lgtD~ 321 (453)
T 3mdu_A 309 LAQGGRLGIGSDS 321 (453)
T ss_dssp HHTTCEEEECCBT
T ss_pred HHCCCEEEEECCC
Confidence 8999999887763
No 50
>2vhl_A N-acetylglucosamine-6-phosphate deacetylase; N- acetyleglucosamine-6-phosphate, carbohydrate metabolism, hydrolase; HET: GLP PGE; 2.05A {Bacillus subtilis}
Probab=99.82 E-value=3.8e-19 Score=165.33 Aligned_cols=192 Identities=14% Similarity=0.134 Sum_probs=119.8
Q ss_pred CccEEEECcEEEeCCCc-eeeeEEEeCCEEEEeeCCCCCCCCceEEeCC-CCeeecccccccccccCCC-CCCCChhhHH
Q 020079 52 SSKILIKGGTVVNAHHQ-QIADVYVEDGIVVAVQPNINVGDDVKVLDAT-GKFVMPGGIDPHTHLAMEF-MGSETIDDFF 128 (331)
Q Consensus 52 ~~~~~i~n~~i~~~~~~-~~~~v~i~~g~I~~ig~~~~~~~~~~~id~~-g~~v~PG~ID~H~H~~~~~-~~~~~~~~~~ 128 (331)
..+++|+|++|++++.. .+++|+|+||+|++|++..+..++.++||++ |++|+|||||+|+|+..+. .+..++++++
T Consensus 2 ~~~~li~~~~v~~~~~~~~~~~v~I~~g~I~~ig~~~~~~~~~~viD~~~g~~v~PGlID~H~H~~~~~~~~~~~~e~~~ 81 (396)
T 2vhl_A 2 AESLLIKDIAIVTENEVIKNGYVGINDGKISTVSTERPKEPYSKEIQAPADSVLLPGMIDIHIHGGYGADTMDASFSTLD 81 (396)
T ss_dssp -CCEEEEEEEEECSSCEEEEEEEEEETTEEEEEESSCCSSCCSEEEECCTTCEEEECEEEEEECEETTEEGGGCSHHHHH
T ss_pred CccEEEEeeEEEcCCccccCceEEEECCEEEEEECCCCCCCCCceEcCCCCCEEcCCEEEEeecCCcCccccCCCHHHHH
Confidence 34689999999998763 5789999999999999321111245899999 9999999999999997641 0234678888
Q ss_pred HHHHHHHhCCceEEecCcCCCCC-cHHHHHHHHHHHhc--c----c--eeeccccccc--------cC---CChhhHHHH
Q 020079 129 SGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAK--N----S--CMDYGFHMAI--------TK---WDEVVSDEM 188 (331)
Q Consensus 129 ~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~--~----~--~~~~~~~~~~--------~~---~~~~~~~~~ 188 (331)
...+.++++||||++|+....+. .....++...+... . . ...+....+. .. ......+.+
T Consensus 82 ~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 161 (396)
T 2vhl_A 82 IMSSRLPEEGTTSFLATTITQEHGNISQALVNAREWKAAEESSLLGAELLGIHLEGPFVSPKRAGAQPKEWIRPSDVELF 161 (396)
T ss_dssp HHHHHGGGGTEEEEEEECCSCCHHHHHHHHHHHHHHHHHCSGGGSSSEEEEEEEECSSSCGGGCTTSCGGGCCCCCHHHH
T ss_pred HHHHHHHcCCeeEEEecccCCCHHHHHHHHHHHHHHHhcccccccccceEEEeeecCccCccccCCCCHHHccCCCHHHH
Confidence 88899999999999998643322 12223333333221 1 1 1111111100 00 011124556
Q ss_pred HHHHHHhCCCeEEEE-EecCCCCcCCHHHHHHHHHHHHHcCCcEEE-Ec-CCchhhHHHHHHHHHcCCC
Q 020079 189 EVMVKEKGINSFKFF-MAYKGSFMINDELLIEGFKRCKSLGALAMV-HA-ENGDAVFEGQKRMIELGIT 254 (331)
Q Consensus 189 ~~~~~~~g~~~ik~~-~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~-H~-e~~~~~~~~~~~~~~~G~~ 254 (331)
+++. +.+.+.+|.+ +.++.. ...++++.|+++|++++. |+ ++..+... ..+.|..
T Consensus 162 ~~~~-~~~~~~ik~~~~~p~~~------~~~~~~~~a~~~g~~v~~gH~~~~~~~~~~----a~~~G~~ 219 (396)
T 2vhl_A 162 KKWQ-QEAGGLIKIVTLAPEED------QHFELIRHLKDESIIASMGHTDADSALLSD----AAKAGAS 219 (396)
T ss_dssp HHHH-HHTTTCEEEEEECGGGS------GGGHHHHHHHHTTCEEEECSBCCCHHHHHH----HHHTTCC
T ss_pred HHHH-HhcCCcceEEEECCCCC------CHHHHHHHHHHCCCEEeecccCCCHHHHHH----HHHcCCC
Confidence 6666 4556667744 333322 123678889999999998 97 45554443 3445653
No 51
>4gy7_A Urease; JACK bean, hydrolase, ME binding, nickel; HET: CME KCX; 1.49A {Canavalia ensiformis} PDB: 3la4_A* 4h9m_A*
Probab=99.81 E-value=3.5e-19 Score=178.16 Aligned_cols=171 Identities=15% Similarity=0.209 Sum_probs=122.0
Q ss_pred CccEEEECcEEEeCCCceeeeEEEeCCEEEEeeCCC------------CCCCCceEEeCCCCeeecccccccccccCCCC
Q 020079 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNI------------NVGDDVKVLDATGKFVMPGGIDPHTHLAMEFM 119 (331)
Q Consensus 52 ~~~~~i~n~~i~~~~~~~~~~v~i~~g~I~~ig~~~------------~~~~~~~~id~~g~~v~PG~ID~H~H~~~~~~ 119 (331)
..|++|+|++|+|+++..+++|.|+||||++||+.. ..++++++||++|++|+|||||+|+|+..+
T Consensus 336 ~~DLVItNA~IVD~tGi~kADI~IkDGRIaAIGkagnpD~~dgV~pdl~ig~gtEVIDA~GkiVtPGfID~HvHl~~P-- 413 (840)
T 4gy7_A 336 SLDTVITNAVIIDYTGIIKADIGIKDGLIASIGKAGNPDIMNGVFSNMIIGANTEVIAGEGLIVTAGAIDCHVHYICP-- 413 (840)
T ss_dssp SCSEEEEEEEEEETTEEEEEEEEEETTEEEEEECCBCTTTCSSCCTTSBCCTTCEEEECTTCEEEECEEEEEEECCCT--
T ss_pred cCCEEEeCeEEECCCCeEEeeEEEECCEEEEEeccCCcccccccccccccCCCCEEEECCCCEEccCeeeeccCCCCC--
Confidence 358999999999998888999999999999999632 223567999999999999999999998765
Q ss_pred CCCChhhHHHHHHHHHhCCceEEecCcCCCCC--------cHHHHHHHHHHHhccceeeccccccccCCChhhHHHHHHH
Q 020079 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING--------SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVM 191 (331)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (331)
. ....++.+||||+++....... .................+++.+....... ..+.+.++
T Consensus 414 -----~----~~~eALasGVTTvv~gGtgp~~~~~~~~~~~~~~~~~~~l~a~~~~~vn~g~~~~~~~~---~~~~L~el 481 (840)
T 4gy7_A 414 -----Q----LVYEAISSGITTLVGGGTGPAAGTRATTCTPSPTQMRLMLQSTDDLPLNFGFTGKGSSS---KPDELHEI 481 (840)
T ss_dssp -----H----HHHHHHHHTEEEEEEECSSSCHHHHHSSCCCSHHHHHHHHHHTTTSSSEEEEEEECCCS---SSHHHHHH
T ss_pred -----C----chHHHHHhhHHHHHhCCCceecCcccccccchHHHHHHHHhhhhcceeEEEEeCCCCcc---cHHHHHHh
Confidence 1 1345678999999976432211 11222333333333344555444332222 23455566
Q ss_pred HHHhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEcCCchhh
Q 020079 192 VKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAV 241 (331)
Q Consensus 192 ~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~ 241 (331)
. +.|+.++|.+..+ ..+++.+.++++.+++++..+.+|.+.....
T Consensus 482 ~-~aGa~g~K~~~~~----~~t~~~i~~aL~~A~e~g~~V~ih~e~~~~~ 526 (840)
T 4gy7_A 482 I-KAGAMGLKLHEDW----GSTPAAIDNCLTIAEHHDIQINIHTDTLNEA 526 (840)
T ss_dssp H-HHTCSEEEEETTT----CCCHHHHHHHHHHHHHHTCEEEEECCTTCSS
T ss_pred h-hceeeEEEecccc----CCCHHHHHHHHHHHHHhCCEEEEeccCcchh
Confidence 6 6789999987543 4578999999999999999999998765443
No 52
>2q09_A Imidazolonepropionase; 9252H, NYSGXRC, 3-(2, 5-dioxo-imidazo 4YL)-propionic acid, PSI-2 community, structural genomics, structure initiative; HET: DI6; 1.97A {Unidentified} SCOP: b.92.1.10 c.1.9.17 PDB: 2oof_A*
Probab=99.81 E-value=9.9e-19 Score=163.58 Aligned_cols=248 Identities=14% Similarity=0.083 Sum_probs=140.9
Q ss_pred ccEEEECcEEEeCCC-------ceeeeEEEeCCEEEEeeCCCCCCC--CceEEeCCCCeeecccccccccccCCCCC---
Q 020079 53 SKILIKGGTVVNAHH-------QQIADVYVEDGIVVAVQPNINVGD--DVKVLDATGKFVMPGGIDPHTHLAMEFMG--- 120 (331)
Q Consensus 53 ~~~~i~n~~i~~~~~-------~~~~~v~i~~g~I~~ig~~~~~~~--~~~~id~~g~~v~PG~ID~H~H~~~~~~~--- 120 (331)
++++|+|+++++++. ..+++|+|+||||++||+....+. +.++||++|++|+|||||+|+|+......
T Consensus 5 ~~~li~n~~i~t~~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~~~~~~~~viD~~G~~v~PG~ID~H~H~~~~~~~~~~ 84 (416)
T 2q09_A 5 CERVWLNVTPATLRSDLADYGLLEPHALGVHEGRIHALVPMQDLKGPYPAHWQDMKGKLVTPGLIDCHTHLIFAGSRAEE 84 (416)
T ss_dssp CSEEEEEEEEBCCCTTSSTTCBCSSEEEEEETTEEEEEEEGGGCC--CCTTSEECTTCEEEECEEEEEECCCCCSCCHHH
T ss_pred ccEEEEcCeEeccCcccccccccccceEEEECCEEEEEcChhhccccCCCeEEeCCCCEECCcccccccCcchhhhhHHH
Confidence 468999999998664 257899999999999998643332 45799999999999999999999764210
Q ss_pred ----------------------------CCChhhHHHH----HHHHHhCCceEEecCcCCCCC--cHHHHHHHHHHHhcc
Q 020079 121 ----------------------------SETIDDFFSG----QAAALAGGTTMHIDFVIPING--SLTAGFEAYEKKAKN 166 (331)
Q Consensus 121 ----------------------------~~~~~~~~~~----~~~~l~~GvTtv~d~~~~~~~--~~~~~~~~~~~~~~~ 166 (331)
..++++++.. .+.++++||||+.|+...... .....++...+....
T Consensus 85 ~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (416)
T 2q09_A 85 FELRQKGVPYAEIARKGGGIISTVRATRAASEDQLFELALPRVKSLIREGVTTVEIKSGYGLTLEDELKMLRVARRLGEA 164 (416)
T ss_dssp HHHHHTTCCHHHHHHTTCTHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHTEEEEEEECCSCCSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCHHHhhhcCCcEeehhhhccCCCHHHHHHHHHHHHHHHHHcCCcEEEeccCcccChHhHHHHHHHHHHHHhh
Confidence 0133444332 366789999999986532221 112333333332211
Q ss_pred ceeecc--c---cc-ccc--CCChhhHHHHH-HHHH---HhC-CCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEE
Q 020079 167 SCMDYG--F---HM-AIT--KWDEVVSDEME-VMVK---EKG-INSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMV 233 (331)
Q Consensus 167 ~~~~~~--~---~~-~~~--~~~~~~~~~~~-~~~~---~~g-~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~ 233 (331)
..+... + +. +.. ...++..+... ++.+ ..+ .+.++.+ .....++.+.++++++.|+++|+++++
T Consensus 165 ~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~a~~~g~~v~~ 241 (416)
T 2q09_A 165 LPIRVKTTLLAAHAVPPEYRDDPDSWVETICQEIIPAAAEAGLADAVDVF---CEHIGFSLAQTEQVYLAADQYGLAVKG 241 (416)
T ss_dssp SSSEEEEEEEEETSCCGGGTTCHHHHHHHHHHTHHHHHHHTTCCSEEEEB---BSTTSBCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCceEEEeeeccccCCccccCCHHHHHHHHHhhhhHHHHhcccccccccc---cCCCcCCHHHHHHHHHHHHHCCCcEEE
Confidence 111110 0 10 000 00112222211 1111 223 4444432 223346889999999999999999999
Q ss_pred EcCCchhhHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHHHhcCCCEEEEeCCCHH------HHHHHHHHHHcC
Q 020079 234 HAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMD------AMEEIAKARKAG 307 (331)
Q Consensus 234 H~e~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~e~~~i~~~~~l~~~~g~~~~i~H~~~~~------~~~~i~~~~~~G 307 (331)
|+......+ ..+.+.+.|..... |..... ++.++++.+.|+. +.+++... ....++.+.+.|
T Consensus 242 H~~~~~~~~-~~~~~~~~g~~~~~-H~~~~~--------~~~~~~~~~~g~~--~~~~p~~~~~~~~~~~~~~~~~~~~G 309 (416)
T 2q09_A 242 HMDQLSNLG-GSTLAANFGALSVD-HLEYLD--------PEGIQALAHRGVV--ATLLPTAFYFLKETKLPPVVALRKAG 309 (416)
T ss_dssp EESSSCCCS-HHHHHHHTTCSEEE-ECTTCC--------HHHHHHHHHHTCE--EEECHHHHHHTTCCCCCCHHHHHHTT
T ss_pred EECCCCchH-HHHHHHHcCCCEEe-ecccCC--------HHHHHHHHHcCCe--EEEcCccHHhhccccccCHHHHHHCC
Confidence 975432111 12233455654322 222222 1345566666765 44443211 123467888999
Q ss_pred CCEEEecC
Q 020079 308 PNFLNTTI 315 (331)
Q Consensus 308 i~v~~~~~ 315 (331)
+++..++.
T Consensus 310 v~~~~gtD 317 (416)
T 2q09_A 310 VPMAVSSD 317 (416)
T ss_dssp CCEEECCC
T ss_pred CeEEEecC
Confidence 99887654
No 53
>2puz_A Imidazolonepropionase; NYSGXRC, PSI-2, N-formimino-L- glutamate, product-bound, structural genomics, protein STRU initiative; HET: NIG; 1.83A {Agrobacterium tumefaciens str} SCOP: b.92.1.10 c.1.9.17 PDB: 2gok_A
Probab=99.80 E-value=1.7e-18 Score=162.07 Aligned_cols=262 Identities=14% Similarity=0.098 Sum_probs=143.2
Q ss_pred CccEEEECcEEEeCCC-------ceeeeEEEeCCEEEEeeCCCCCCC----CceEEeCCCCeeecccccccccccCCCC-
Q 020079 52 SSKILIKGGTVVNAHH-------QQIADVYVEDGIVVAVQPNINVGD----DVKVLDATGKFVMPGGIDPHTHLAMEFM- 119 (331)
Q Consensus 52 ~~~~~i~n~~i~~~~~-------~~~~~v~i~~g~I~~ig~~~~~~~----~~~~id~~g~~v~PG~ID~H~H~~~~~~- 119 (331)
+.+++|+|+++++++. ..+++|+|+||||++||+....+. +.++||++|++|+|||||+|+|+.....
T Consensus 14 ~~~~li~n~~i~t~~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~~~~~~~~~~viD~~G~~v~PG~ID~H~H~~~~~~~ 93 (419)
T 2puz_A 14 NATALWRNAQLATLNPAMDGIGAVENAVIAVRNGRIAFAGPESDLPDDLSTADETTDCGGRWITPALIDCHTHLVFGGNR 93 (419)
T ss_dssp -CEEEEEEEEEECCCTTSSTTCEEEEEEEEEETTEEEEEEETTSCCGGGSCCSEEEECTTCEEEECEEECCCCCCCSSCC
T ss_pred CCcEEEECCeEeccCcccccCCcccceEEEEECCEEEEEcChhhhhhhccCCCeEEeCCCCEeCcCceecccCccchhhh
Confidence 4679999999998654 257899999999999998643322 2589999999999999999999965411
Q ss_pred ---------C---------------------CCChhhHHH----HHHHHHhCCceEEecCcCCCCC--cHHHHHHHHHHH
Q 020079 120 ---------G---------------------SETIDDFFS----GQAAALAGGTTMHIDFVIPING--SLTAGFEAYEKK 163 (331)
Q Consensus 120 ---------~---------------------~~~~~~~~~----~~~~~l~~GvTtv~d~~~~~~~--~~~~~~~~~~~~ 163 (331)
+ ..++++.+. ..+.++++|||++.|+...... .....++.+++.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~~ 173 (419)
T 2puz_A 94 AMEFEMRLNGATYEEIAKAGGGIVSSVRDTRALSDEVLVAQALPRLDTLLSEGVSTIEIKSGYGLDIETELKMLRVARRL 173 (419)
T ss_dssp HHHHHHHHTTCCHHHHHHTTCSHHHHHHHHHHSCHHHHHHHHHHHHHHHHTTTEEEEEEECCSCCSHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCHHHHHhcCCCeecchhhhccCCHHHHHHHHHHHHHHHHhcCCeEEEeCCCCCCCchhHHHHHHHHHHH
Confidence 0 012222222 2356788999999985322211 122333444433
Q ss_pred hccceeec-----cccccccC---CChhhHHH-----HHHHHHHhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCc
Q 020079 164 AKNSCMDY-----GFHMAITK---WDEVVSDE-----MEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGAL 230 (331)
Q Consensus 164 ~~~~~~~~-----~~~~~~~~---~~~~~~~~-----~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~ 230 (331)
.....+.. ..+..... ..++..+. +..+......+.++.+.. ...++.+.++++++.|+++|++
T Consensus 174 ~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~a~~~g~~ 250 (419)
T 2puz_A 174 ETLRPVRIVTSYLAAHATPADYKGRNADYITDVVLPGLEKAHAEGLADAVDGFCE---GIAFSVKEIDRVFAAAQQRGLP 250 (419)
T ss_dssp TTTSSCEEEEEECCTTCCCGGGTTCHHHHHHHTHHHHHHHHHHTTCCSEECCEES---TTSBCHHHHHHHHHHHHHTTCC
T ss_pred hhhcCceEEEEecccccCchhhcccHHHHHHHHHhhhhhhhhhcccccccccccC---CCCcCHHHHHHHHHHHHHCCCc
Confidence 32211111 01110000 01111111 111111112333333221 2345789999999999999999
Q ss_pred EEEEcCCchhhHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHHHhcCCCEEEEeCCCHH------HHHHHHHHH
Q 020079 231 AMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMD------AMEEIAKAR 304 (331)
Q Consensus 231 v~~H~e~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~e~~~i~~~~~l~~~~g~~~~i~H~~~~~------~~~~i~~~~ 304 (331)
+.+|+....... ..+...+.|..... |..... ++.++++.+.|+. +++++... ....++.+.
T Consensus 251 v~~H~~~~~~~~-~~~~~~~~g~~~~~-H~~~~~--------~~~~~~~~~~g~~--~~~~p~~~~~l~~~~~~~~~~~~ 318 (419)
T 2puz_A 251 VKLHAEQLSNLG-GAELAASYNALSAD-HLEYLD--------ETGAKALAKAGTV--AVLLPGAFYALREKQLPPVQALR 318 (419)
T ss_dssp BEEEESSSSCCS-HHHHHHHTTCSEEE-ECTTCC--------HHHHHHHHHHTCE--EEECHHHHHHHTCCCCCCHHHHH
T ss_pred EEEEecccccCC-HHHHHHhcCCceeh-HhccCC--------HHHHHHHHHcCCc--EEECCchhhhhcccccccHHHHH
Confidence 999974322111 12333455654433 222211 1234556666764 44443211 123457888
Q ss_pred HcCCCEEEecC--Cccccchhhhhhh
Q 020079 305 KAGPNFLNTTI--PLCDSCSNIIRMV 328 (331)
Q Consensus 305 ~~Gi~v~~~~~--p~~~~~~~~~~~~ 328 (331)
+.|+++..++. |..+...++..+|
T Consensus 319 ~~Gv~~~lgsD~~~~~~~~~~l~~~~ 344 (419)
T 2puz_A 319 DAGAEIALATDCNPGTSPLTSLLLTM 344 (419)
T ss_dssp HHTCCEEECCCCCSSSCCBCCHHHHH
T ss_pred HCCCeEEEECCCCCCCCccccHHHHH
Confidence 99999887554 3333333444433
No 54
>1p1m_A Hypothetical protein TM0936; putative metal dependent hydrolase, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: b.92.1.4 c.1.9.9 PDB: 2plm_A* 1j6p_A
Probab=99.80 E-value=1.5e-18 Score=161.89 Aligned_cols=180 Identities=21% Similarity=0.253 Sum_probs=119.1
Q ss_pred EEEECcEEEeCCC--ceeeeEEEeCCEEEEeeCCCCCCCCceEEeCCCCeeecccccccccccCCCC-C-----------
Q 020079 55 ILIKGGTVVNAHH--QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFM-G----------- 120 (331)
Q Consensus 55 ~~i~n~~i~~~~~--~~~~~v~i~~g~I~~ig~~~~~~~~~~~id~~g~~v~PG~ID~H~H~~~~~~-~----------- 120 (331)
++|+|++|++++. ..+++|+|+||||++||+.. ++.+ ||++|++|+|||||+|+|+..... +
T Consensus 1 ~li~n~~v~~~~~~~~~~~~v~I~~g~I~~vg~~~---~~~~-iD~~g~~v~PG~ID~H~H~~~~~~~~~~~~~~~~~~~ 76 (406)
T 1p1m_A 1 MIIGNCLILKDFSSEPFWGAVEIENGTIKRVLQGE---VKVD-LDLSGKLVMPALFNTHTHAPMTLLRGVAEDLSFEEWL 76 (406)
T ss_dssp CEEEEEEECCSTTSCCEEEEEEEETTEEEEEEESS---CCCS-EECTTEEEEECEEEEEECGGGGGGTTSSCSCCHHHHH
T ss_pred CEEEccEEEecCccccccceEEEECCEEEEeeCCC---Ccce-ecCCCcEEeecccchhhccchhhhccccCCCCHHHHH
Confidence 3799999998764 57899999999999999864 2456 999999999999999999976421 0
Q ss_pred ---------CCChhhHHHHH----HHHHhCCceEEecCcCCCCCcHHHHHHHHHHHhccceeeccccccccCCChhhHHH
Q 020079 121 ---------SETIDDFFSGQ----AAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDE 187 (331)
Q Consensus 121 ---------~~~~~~~~~~~----~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (331)
..++++++... +.++++||||++|+.. .....++...+.+.+......+. .......+.+++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~----~~~~~~~~~~~~g~r~~~~~~~~-~~~~~~~~~~~~ 151 (406)
T 1p1m_A 77 FSKVLPIEDRLTEKMAYYGTILAQMEMARHGIAGFVDMYF----HEEWIAKAVRDFGMRALLTRGLV-DSNGDDGGRLEE 151 (406)
T ss_dssp HTTHHHHHTTCCHHHHHHHHHHHHHHHHTTTEEEEEEEES----SHHHHHHHHHHHCCEEEEEEEEC-CBTTBCTTHHHH
T ss_pred HhhhccchhcCCHHHHHHHHHHHHHHHHhcCcEEEEechh----CHHHHHHHHHHcCCEEEEEcccc-cCCCCHHHHHHH
Confidence 02345554433 4568899999999753 12333344444443332211111 001112233444
Q ss_pred HHHHHHH-hCC-CeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEc-CCchhhHH
Q 020079 188 MEVMVKE-KGI-NSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA-ENGDAVFE 243 (331)
Q Consensus 188 ~~~~~~~-~g~-~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~-e~~~~~~~ 243 (331)
..+.++. .+. ..++....++.++.++++.++++++.|+++|+++++|+ ++.+....
T Consensus 152 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~ 210 (406)
T 1p1m_A 152 NLKLYNEWNGFEGRIFVGFGPHSPYLCSEEYLKRVFDTAKSLNAPVTIHLYETSKEEYD 210 (406)
T ss_dssp HHHHHHHHTTGGGTEEEEEEECCTTTSCHHHHHHHHHHHHHTTCCEEEEESCSTTCCCC
T ss_pred HHHHHHHhhCCCCcEEEEEecCccCcCCHHHHHHHHHHHHHCCCcEEEEcCCCchHHHH
Confidence 4344422 222 35777777777777899999999999999999999998 45444443
No 55
>3hpa_A Amidohydrolase; signature of Zn ligands, structural genomics, NYSGXRC, target 9236E, PSI-2, protein structure initiative; 2.20A {Unidentified}
Probab=99.80 E-value=9.3e-18 Score=158.59 Aligned_cols=257 Identities=19% Similarity=0.245 Sum_probs=143.2
Q ss_pred CccEEEECcEEE-eCCC----ceeeeEEEeCCEEEEeeCCCCCC-CCceEEeCCCCeeecccccccccccCCCCC-----
Q 020079 52 SSKILIKGGTVV-NAHH----QQIADVYVEDGIVVAVQPNINVG-DDVKVLDATGKFVMPGGIDPHTHLAMEFMG----- 120 (331)
Q Consensus 52 ~~~~~i~n~~i~-~~~~----~~~~~v~i~~g~I~~ig~~~~~~-~~~~~id~~g~~v~PG~ID~H~H~~~~~~~----- 120 (331)
+.+++|+|++|+ ++++ .++++|+|+||||++||+..+.+ ++.++||++|++|+|||||+|+|+.+....
T Consensus 28 p~~llI~na~vi~T~D~~~~vi~~gdV~I~dgrI~aVG~~~~~~~~~~~vIDa~G~~v~PG~ID~H~H~~~~~~~g~~~~ 107 (479)
T 3hpa_A 28 PKTLLVKHADVLVTMDDTRRELRDAGLYIEDNRIVAVGPSAELPETADEVLDLRGHLVIPGLVNTHHHMYQSLTRAVPAA 107 (479)
T ss_dssp -CEEEEEEEEEEECCCTTCCEEEEEEEEEETTEEEEEEEGGGSCSCCSEEEECTTEEEEECEEECCCCGGGGGSCSCTTT
T ss_pred CCCEEEECCEEEEeeCCCCCEEcCcEEEEECCEEEEEeCCccCCCCCCeEEECCCCEEeeCceeHhhCcchhcccccccC
Confidence 467999999976 4442 46899999999999999865543 356899999999999999999998654210
Q ss_pred -----------------CCChhhHH----HHHHHHHhCCceEEecCcCCCCC--cHHHHHHHHHHHhccceeeccccc--
Q 020079 121 -----------------SETIDDFF----SGQAAALAGGTTMHIDFVIPING--SLTAGFEAYEKKAKNSCMDYGFHM-- 175 (331)
Q Consensus 121 -----------------~~~~~~~~----~~~~~~l~~GvTtv~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-- 175 (331)
....++.+ .....++..|+|++.+....... ............+.+.........
T Consensus 108 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 187 (479)
T 3hpa_A 108 QNAELFGWLTNLYKIWAHLTPEMIEVSTLTAMAELLQSGCTTSSDHLYIYPNGSRLDDSIGAAQRIGMRFHASRGAMSVG 187 (479)
T ss_dssp TTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTTEEEEECCBCCCCTTCCHHHHHHHHHHHTCEEEEEEEECC--
T ss_pred CCcchHHHHhhhhhhhhhcCHHHHHHHHHHHHHHHHHhCCceecceeeeccchhhHHHHHHHHHHhcchhhhhhheeecc
Confidence 01112221 23455688999999987544332 334444444444433221111100
Q ss_pred ---------cccCCChhhHHHHHHHHHH---hCC-CeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEc-CCchhh
Q 020079 176 ---------AITKWDEVVSDEMEVMVKE---KGI-NSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA-ENGDAV 241 (331)
Q Consensus 176 ---------~~~~~~~~~~~~~~~~~~~---~g~-~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~-e~~~~~ 241 (331)
..........+...++... .+. ........+......+.+.+.++.+.|++.|.++..|. +...+.
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~~~~h~~~~~~~~ 267 (479)
T 3hpa_A 188 QRDGGLPPDSVVEREPDILRDTQRLIETYHDEGRYAMLRVVVAPCSPFSVSRDLMRDAAVLAREYGVSLHTHLAENVNDI 267 (479)
T ss_dssp --------------CHHHHHHHHHHHHHHCCCSTTCSEEEEEEESCTTTSCHHHHHHHHHHHHHHTCEEEEEESCSHHHH
T ss_pred ccccCCCchhhhhhhhhHHHHHHHHHHHhhhhcccccceeEecccccccCCHHHHHHHHHHHHhcCCeEEeecccchHHH
Confidence 0000111222233333322 111 23344556666777899999999999999999999996 444333
Q ss_pred HHHH--------HHHHHcCCCCcccccccCChHHHHHHHHHHHHHHHhcCCCEEEEeCCCH-----HHHHHHHHHHHcCC
Q 020079 242 FEGQ--------KRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSM-----DAMEEIAKARKAGP 308 (331)
Q Consensus 242 ~~~~--------~~~~~~G~~~~~~~~~~~~~~~e~~~i~~~~~l~~~~g~~~~i~H~~~~-----~~~~~i~~~~~~Gi 308 (331)
.... +...+.+...+.....+.....+ ....+..+.+.. ..+++.. ......+.+.+.|+
T Consensus 268 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~h~~~~~~-----~~~~~~~~~~~~--~~~~p~~~~~~~~~~~~~~~~~~~~~ 340 (479)
T 3hpa_A 268 AYSREKFGMTPAEYAEDLGWVGHDVWHAHCVQLDD-----AGIGLFARTGTG--VAHCPCSNMRLASGIAPVKKMRLAGV 340 (479)
T ss_dssp HC-------CHHHHHHHTTCCSTTEEEEECTTCCH-----HHHHHHHHHTCE--EEECHHHHHHTTCCCCCHHHHHHHTC
T ss_pred HHHHHHcCCchHHHHhhhccccccceeeeeEecch-----hHHHHHHhcCCc--eeeccccccccccCccchhHHHhcCC
Confidence 2221 23444555444332222111111 112333444443 3333211 11234566777888
Q ss_pred CEEEecC
Q 020079 309 NFLNTTI 315 (331)
Q Consensus 309 ~v~~~~~ 315 (331)
++..++.
T Consensus 341 ~v~~gtD 347 (479)
T 3hpa_A 341 PVGLGVD 347 (479)
T ss_dssp CEEECCC
T ss_pred cEEeecc
Confidence 8876654
No 56
>1yrr_A N-acetylglucosamine-6-phosphate deacetylase; (beta/alpha)8 barrel, beta sandwich, hydrolase; 2.00A {Escherichia coli} SCOP: b.92.1.5 c.1.9.10 PDB: 1ymy_A 2p50_A 2p53_A*
Probab=99.78 E-value=2.3e-18 Score=159.29 Aligned_cols=180 Identities=13% Similarity=0.163 Sum_probs=115.0
Q ss_pred EEEECcEEEeCCC-ceeeeEEEeCCEEEEeeCCCCCCCCceEEeCCCCeeecccccccccccCCC--C---CCCChhhHH
Q 020079 55 ILIKGGTVVNAHH-QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEF--M---GSETIDDFF 128 (331)
Q Consensus 55 ~~i~n~~i~~~~~-~~~~~v~i~~g~I~~ig~~~~~~~~~~~id~~g~~v~PG~ID~H~H~~~~~--~---~~~~~~~~~ 128 (331)
++|+|++|++++. .++++|+|+||+|++|++....+++.++||++|++|+|||||+|+|+.... . ...+++.++
T Consensus 2 ~li~~~~v~~~~~~~~~~~v~I~~g~I~~vg~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~g~~~~~~~~~~~~~~~~ 81 (382)
T 1yrr_A 2 YALTQGRIFTGHEFLDDHAVVIADGLIKSVCPVAELPPEIEQRSLNGAILSPGFIDVQLNGCGGVQFNDTAEAVSVETLE 81 (382)
T ss_dssp EEEESSEEECSSCEESSEEEEEETTEEEEEEEGGGSCTTCCEEECTTCEEEECEEEEEESEETTEESSSSTTTSSHHHHH
T ss_pred EEEEeeEEEcCCceeeCCEEEEECCEEEEEecCCCCCccceeecCCCCEEccCEEEEeecccCCcCccccccCCCHHHHH
Confidence 6899999999875 357899999999999997643333568999999999999999999986421 0 112567777
Q ss_pred HHHHHHHhCCceEEecCcCCCCC-cHHHHHHHHHHH----hccceeeccccccc--c--C---CC----hhhHHHHHHHH
Q 020079 129 SGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKK----AKNSCMDYGFHMAI--T--K---WD----EVVSDEMEVMV 192 (331)
Q Consensus 129 ~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~--~--~---~~----~~~~~~~~~~~ 192 (331)
...+.++++||||++|+....+. ...+.+...++. +.+ ........+. . . .. ....+.++ +.
T Consensus 82 ~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~g~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~-~~ 159 (382)
T 1yrr_A 82 IMQKANEKSGCTNYLPTLITTSDELMKQGVRVMREYLAKHPNQ-ALGLHLEGPWLNLVKKGTHNPNFVRKPDAALVD-FL 159 (382)
T ss_dssp HHHHHHHHTTEEEEEEEEECCCHHHHHHHHHHHHHHHHHCTTS-BCCEEEECSSCCCSCC-CCCSCSCCHHHHHHHH-HH
T ss_pred HHHHHHHhCCeEEEEeecCCCCHHHHHHHHHHHHHHhhccCCc-eeEEEEeCCcCCccccCCCCHHHccCCCHHHHH-HH
Confidence 77888999999999997543322 122222222222 222 1111111100 0 0 00 11134444 55
Q ss_pred HHhCCCeEEEEE-ecCCCCcCCHHHHHHHHHHHHHcCCcEEE-EcC-CchhhHHH
Q 020079 193 KEKGINSFKFFM-AYKGSFMINDELLIEGFKRCKSLGALAMV-HAE-NGDAVFEG 244 (331)
Q Consensus 193 ~~~g~~~ik~~~-~~~~~~~~~~~~l~~~~~~A~~~g~~v~~-H~e-~~~~~~~~ 244 (331)
+.+.+.+|.+. .+ .+.+.++++.|+++|+++++ |+. +.+++...
T Consensus 160 -~~~~~~ik~~~~~~-------~~~~~~~~~~a~~~g~~v~~gH~~~~~~~~~~~ 206 (382)
T 1yrr_A 160 -CENADVITKVTLAP-------EMVPAEVISKLANAGIVVSAGHSNATLKEAKAG 206 (382)
T ss_dssp -HHTTTTEEEEEECG-------GGSCHHHHHHHHHTTCEEEECSCCCCHHHHHHH
T ss_pred -HhcCCCEEEEEECC-------CCChHHHHHHHHHCCCEEEEECCCCCHHHHHHH
Confidence 56777887652 21 24556789999999999998 985 55554433
No 57
>1onw_A Isoaspartyl dipeptidase; amidohydrolase, hydrolase, metalloprotease; HET: KCX; 1.65A {Escherichia coli} SCOP: b.92.1.7 c.1.9.13 PDB: 1onx_A* 1po9_A* 1poj_A* 1pok_B* 2aqo_A* 1ybq_A* 2aqv_A*
Probab=99.78 E-value=1.5e-17 Score=154.32 Aligned_cols=249 Identities=18% Similarity=0.128 Sum_probs=135.2
Q ss_pred ccEEEECcEEEeCCCceeeeEEEeCCEEEEeeCCCCC--CCCceEEeCCCCeeecccccccccccCCCCCC-CChhhHHH
Q 020079 53 SKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINV--GDDVKVLDATGKFVMPGGIDPHTHLAMEFMGS-ETIDDFFS 129 (331)
Q Consensus 53 ~~~~i~n~~i~~~~~~~~~~v~i~~g~I~~ig~~~~~--~~~~~~id~~g~~v~PG~ID~H~H~~~~~~~~-~~~~~~~~ 129 (331)
..++|+|++|++++...+++|+|+||+|++|++.... +++.++||++|++|+|||||+|+|+....... ........
T Consensus 8 ~~~~i~n~~v~~~~~~~~~~v~i~~g~I~~ig~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~~~~~~ 87 (390)
T 1onw_A 8 GFTLLQGAHLYAPEDRGICDVLVANGKIIAVASNIPSDIVPNCTVVDLSGQILCPGFIDQHVHLIGGGGEAGPTTRTPEV 87 (390)
T ss_dssp CCEEEESCEEESSSEEEECEEEEETTEEEEEETTCCTTSSSSCEEEECTTCEEEECEEEEEECTTCCBCTTSGGGBCCCC
T ss_pred ceEEEECcEEECCCCCccceEEEECCEEEEEecCcccCCCCCCeEEeCCCCEECcCeeEeeECccccCccccccccCHHH
Confidence 4589999999998766678999999999999985432 13468999999999999999999986431000 00011112
Q ss_pred HHHHHHhCCceEEecCcCCCCC--cH---HHHHHHHHHHhccceeecccc-ccccCCChhhHHHHHHHHHHhCCCeEEEE
Q 020079 130 GQAAALAGGTTMHIDFVIPING--SL---TAGFEAYEKKAKNSCMDYGFH-MAITKWDEVVSDEMEVMVKEKGINSFKFF 203 (331)
Q Consensus 130 ~~~~~l~~GvTtv~d~~~~~~~--~~---~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~ik~~ 203 (331)
..+.++++||||++|+....+. .. ....+...+.+.+.......+ .+...........+ ... ....++++.
T Consensus 88 ~~~~~~~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~g~~~~~~~~~~~~~~~~~-~~~--~~~~g~~~~ 164 (390)
T 1onw_A 88 ALSRLTEAGVTSVVGLLGTDSISRHPESLLAKTRALNEEGISAWMLTGAYHVPSRTITGSVEKDV-AII--DRVIGVKCA 164 (390)
T ss_dssp CHHHHHHTTEEEEEECCCSCCSSCCHHHHHHHHHHHHHHTSEEEEEEECSCSSCCCSSSCHHHHH-HHC--TTEEEEEEE
T ss_pred HHHHHHHCCeeEEecCCCcccccCcHHHHHHHHHHHHhcCCceEEeccccCCCchhhhhhhcchh-hhH--HHhhcceee
Confidence 3577899999999998644322 11 122223333332221111111 11111111111111 111 111223666
Q ss_pred EecCCCCcCCHHHHHHHHHHHHHcCC------cEEEEc-CCchhhHHHHHHHHHcCCCCccc-ccccCChHHHHHHHHHH
Q 020079 204 MAYKGSFMINDELLIEGFKRCKSLGA------LAMVHA-ENGDAVFEGQKRMIELGITGPEG-HALSRPPLLEGEATTRA 275 (331)
Q Consensus 204 ~~~~~~~~~~~~~l~~~~~~A~~~g~------~v~~H~-e~~~~~~~~~~~~~~~G~~~~~~-~~~~~~~~~e~~~i~~~ 275 (331)
+.++.....+.++++++++.+++.+. .+++|. ++....+...+.. +.|.....+ +..+.. .. ...+.+.
T Consensus 165 ~~~~~~~~~~~~~l~~~~~~a~~~~~~~~~~g~~~~h~~~~~~~~~~~~~~~-~~g~~~v~~l~~~h~~-~~-~~~~~~~ 241 (390)
T 1onw_A 165 ISDHRSAAPDVYHLANMAAESRVGGLLGGKPGVTVFHMGDSKKALQPIYDLL-ENCDVPISKLLPTHVN-RN-VPLFEQA 241 (390)
T ss_dssp ESSTTSCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEEECSCTTTTHHHHHHH-HTCCCCGGGEEEECGG-GS-HHHHHHH
T ss_pred ecCCCCCCCCHHHHHHHHHHHhhhhhhhccCceEEEEeCCCHHHHHHHHHHH-hccCCceEEeeccccc-cC-HHHHHHH
Confidence 66665566789999999888876553 377896 5555554443333 333322221 111110 00 1122334
Q ss_pred HHHHHhcCCCEEEEeCC-CH--HHHHHHHHHHHcCCC
Q 020079 276 IRLAEFVNTPLYVVHVM-SM--DAMEEIAKARKAGPN 309 (331)
Q Consensus 276 ~~l~~~~g~~~~i~H~~-~~--~~~~~i~~~~~~Gi~ 309 (331)
++.++..+. ..+ ++. .. ...+.++++.+.|++
T Consensus 242 ~~~~~~~~~-~~~-~~~~~~~~~~~~~l~~~~~~g~~ 276 (390)
T 1onw_A 242 LEFARKGGT-IDI-TSSIDEPVAPAEGIARAVQAGIP 276 (390)
T ss_dssp HHHHHTTCC-EEE-ETTCCSSSCHHHHHHHHHHTTCC
T ss_pred HHHHhcCCc-ccc-ccccCCCCcCHHHHHHHHHcCCC
Confidence 444444332 222 222 11 356788888899974
No 58
>2bb0_A Imidazolonepropionase; TIM barrel, hydrolase; 2.00A {Bacillus subtilis} SCOP: b.92.1.10 c.1.9.17 PDB: 2g3f_A
Probab=99.77 E-value=2e-17 Score=154.88 Aligned_cols=248 Identities=15% Similarity=0.112 Sum_probs=137.7
Q ss_pred ccEEEEC-cEEEeCCC--------------ceeeeEEEeCCEEEEeeCCC-CC-CCCceEEeCCCCeeeccccccccccc
Q 020079 53 SKILIKG-GTVVNAHH--------------QQIADVYVEDGIVVAVQPNI-NV-GDDVKVLDATGKFVMPGGIDPHTHLA 115 (331)
Q Consensus 53 ~~~~i~n-~~i~~~~~--------------~~~~~v~i~~g~I~~ig~~~-~~-~~~~~~id~~g~~v~PG~ID~H~H~~ 115 (331)
.+++|+| ++|++++. ..+++|+|+||||++||+.. .. .+..++||++|++|+|||||+|+|+.
T Consensus 5 ~d~li~n~g~I~t~~~~~~~~~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~ 84 (421)
T 2bb0_A 5 IDTILINIGQLLTMESSGPRAGKSMQDLHVIEDAVVGIHEQKIVFAGQKGAEAGYEADEIIDCSGRLVTPGLVDPHTHLV 84 (421)
T ss_dssp EEEEEEEEEEECCCCCSSCCCGGGGTCCCCEEEEEEEEETTEEEEEEETTTTTTCEEEEEEECTTCEEEECEEECCBCCC
T ss_pred ccEEEECCcEEEecCCCccccccccccccccccceEEEECCEEEEEecccccccCCCCeEEeCCCCEeccCeeccCcCcc
Confidence 4689999 99997652 25789999999999999854 20 12357999999999999999999986
Q ss_pred CCCCC-------------------------------CCChhhHHH----HHHHHHhCCceEEecCcCCCCC--cHHHHHH
Q 020079 116 MEFMG-------------------------------SETIDDFFS----GQAAALAGGTTMHIDFVIPING--SLTAGFE 158 (331)
Q Consensus 116 ~~~~~-------------------------------~~~~~~~~~----~~~~~l~~GvTtv~d~~~~~~~--~~~~~~~ 158 (331)
..... ..+++.+.. ..+.++++||||+.|+...... .....++
T Consensus 85 ~~~~~~~~~~~~~~g~~~~~~~~~gggi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTt~~~~~~~~~~~~~~~~~~~ 164 (421)
T 2bb0_A 85 FGGSREKEMNLKLQGISYLDILAQGGGILSTVKDTRAASEEELLQKAHFHLQRMLSYGTTTAEVKSGYGLEKETELKQLR 164 (421)
T ss_dssp CCSCCGGGHHHHHTTCCHHHHHHTTCTHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTTEEEEEEECCSCCSHHHHHHHHH
T ss_pred ccccchHHHHHHHhCCCHHHHhhcCCCcccchhhhhcCCHHHHHHHHHHHHHHHHhcCceEEEeccccCcCccchHHHHH
Confidence 54110 012222222 2366788999999985422211 1122333
Q ss_pred HHHHHhccceeecc-----ccc-c--ccCCChhhHHHHHHHHH---Hh-CCCeEEEEEecCCCCcCCHHHHHHHHHHHHH
Q 020079 159 AYEKKAKNSCMDYG-----FHM-A--ITKWDEVVSDEMEVMVK---EK-GINSFKFFMAYKGSFMINDELLIEGFKRCKS 226 (331)
Q Consensus 159 ~~~~~~~~~~~~~~-----~~~-~--~~~~~~~~~~~~~~~~~---~~-g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~ 226 (331)
..++......+... .+. + .....++..+...+..+ .. ..+.++.+. ....++.+.++++++.|++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~e~l~~~~~~a~~ 241 (421)
T 2bb0_A 165 VAKKLHESQPVDLVSTFMGAHAIPPEYQNDPDDFLDQMLSLLPEIKEQELASFADIFT---ETGVFTVSQSRRYLQKAAE 241 (421)
T ss_dssp HHHHHHHHSSSEEEEEEEEESSCCGGGTTCHHHHHHHHHTTHHHHHHTTCCSEEEEBB---CTTSBCHHHHHHHHHHHHH
T ss_pred HHHHHHhhcCceEEEEeeccccCChhhcccHHHHHHHHHHhhHHhhccCccccccccC---CcCCCCHHHHHHHHHHHHH
Confidence 33332211111110 010 0 00001112222111111 12 234444321 2234588999999999999
Q ss_pred cCCcEEEEcCCchhhHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHHHhcCCCEEEEeCCCHH------HHHHH
Q 020079 227 LGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMD------AMEEI 300 (331)
Q Consensus 227 ~g~~v~~H~e~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~e~~~i~~~~~l~~~~g~~~~i~H~~~~~------~~~~i 300 (331)
+|+++++|+....... ..+...+.|..... |+.... ++.++++.+.|+. ++|++... .+..+
T Consensus 242 ~g~~v~~H~~~~~~~~-~~~~~~~~g~~~~~-H~~~~~--------~~~i~~~~~~g~~--~~~~p~~~~~l~~~~~~~~ 309 (421)
T 2bb0_A 242 AGFGLKIHADEIDPLG-GAELAGKLKAVSAD-HLVGTS--------DEGIKKLAEAGTI--AVLLPGTTFYLGKSTYARA 309 (421)
T ss_dssp TTCEEEEEECSSSCCS-HHHHHHHTTCSEEE-ECTTCC--------HHHHHHHHHHTCE--EEECHHHHHHTTCCCCCCH
T ss_pred CCCCEEEEeccccccC-HHHHHHHcCCcEEh-hhhcCC--------HHHHHHHHHcCCe--EEECCchhhhhcccccchH
Confidence 9999999973221111 12233445544322 222111 2345566666764 55554311 22346
Q ss_pred HHHHHcCCCEEEecC
Q 020079 301 AKARKAGPNFLNTTI 315 (331)
Q Consensus 301 ~~~~~~Gi~v~~~~~ 315 (331)
+.+.++|++++.++.
T Consensus 310 ~~~~~~Gv~v~lgtD 324 (421)
T 2bb0_A 310 RAMIDEGVCVSLATD 324 (421)
T ss_dssp HHHHHTTCCEEECCC
T ss_pred HHHHHCCCeEEEeCC
Confidence 889999999887654
No 59
>3ooq_A Amidohydrolase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, H PSI-2; 2.06A {Thermotoga maritima}
Probab=99.77 E-value=1.9e-18 Score=160.68 Aligned_cols=95 Identities=37% Similarity=0.450 Sum_probs=73.0
Q ss_pred CccEEEECcEEEeCCC-ceeeeEEEeCCEEEEeeCCCCCCCCceEEeCCCCeeecccccccccccCCCCCC---------
Q 020079 52 SSKILIKGGTVVNAHH-QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGS--------- 121 (331)
Q Consensus 52 ~~~~~i~n~~i~~~~~-~~~~~v~i~~g~I~~ig~~~~~~~~~~~id~~g~~v~PG~ID~H~H~~~~~~~~--------- 121 (331)
+.+++|+|++|+++++ ...++|+|+||+|++|++... +++.++||++|++|+|||||+|+|++....+.
T Consensus 4 ~~~~~i~~~~i~~~~~~~~~~~v~i~~g~I~~i~~~~~-~~~~~~id~~g~~~~Pg~~d~h~h~~~~~~~~~~~~~~~~~ 82 (396)
T 3ooq_A 4 SVKILFKNATVFPITSRPFKGDVLVSNGKVEKVGENIE-DPDAEIVDLTGKFLFPGFVDAHSHIGLFEEGVGYYYSDGNE 82 (396)
T ss_dssp --CEEEEEEEECCSSSCCEEEEEEEETTEEEEEESCCC-CTTSEEEECTTCEEEECEEEEEECTTTSCTTSCGGGCCSCC
T ss_pred cceEEEECcEEEeCCCCeEEeEEEEECCEEEEecCCCC-CCCCeEEECCCCEEecCEEecccccCccccCcccccccccc
Confidence 3568999999999874 334899999999999998765 55679999999999999999999998642211
Q ss_pred --------CChhhHH----HHHHHHHhCCceEEecCcC
Q 020079 122 --------ETIDDFF----SGQAAALAGGTTMHIDFVI 147 (331)
Q Consensus 122 --------~~~~~~~----~~~~~~l~~GvTtv~d~~~ 147 (331)
...++.+ .....++++|||++.++..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~g 120 (396)
T 3ooq_A 83 ATDPVTPHVKALDGFNPQDPAIERALAGGVTSVMIVPG 120 (396)
T ss_dssp TTCSBCTTCBGGGGCCTTCHHHHHHHTTTEEEEEECCC
T ss_pred ccCccCccccHhhhcCcCcHHHHHHHhCCeEEEeccCC
Confidence 1111111 3567889999999999854
No 60
>3icj_A Uncharacterized metal-dependent hydrolase; structural genomics, amidohydrolase, PSI-2, protein structur initiative; HET: KCX; 1.95A {Pyrococcus furiosus} PDB: 3etk_A* 3igh_X*
Probab=99.77 E-value=2.6e-18 Score=165.20 Aligned_cols=63 Identities=22% Similarity=0.357 Sum_probs=52.8
Q ss_pred cEEEECcEEEeCCCc--eeeeEEEeCCEEEEeeCCCCC-----CCCceEEeCCCCeeecccccccccccC
Q 020079 54 KILIKGGTVVNAHHQ--QIADVYVEDGIVVAVQPNINV-----GDDVKVLDATGKFVMPGGIDPHTHLAM 116 (331)
Q Consensus 54 ~~~i~n~~i~~~~~~--~~~~v~i~~g~I~~ig~~~~~-----~~~~~~id~~g~~v~PG~ID~H~H~~~ 116 (331)
+++|+|++|++++.. ...+|+|+||||++||+..+. .++.++||++|++|+|||||+|+|+..
T Consensus 37 ~~li~ng~I~t~~~~~~~~~~v~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~G~~v~PGfiD~H~H~~~ 106 (534)
T 3icj_A 37 MKALINGTIYTSFSPVKKVSGLVISNERVLYAGDSSTALRIAELAGGEIIDLKGKFVMPAFFDSHLHLDE 106 (534)
T ss_dssp EEEEESSEEEEEETTEEEESEEEEETTEEEEEECHHHHHHHHHHHTCEEEECTTCEEEECEEEEEECHHH
T ss_pred CEEEECCEEECCCCCCceeeEEEEECCEEEEEcChHHHHhhccCCCCEEEECCCCEEecCEeehhhhhhh
Confidence 379999999997754 477999999999999985432 235689999999999999999999643
No 61
>3iv8_A N-acetylglucosamine-6-phosphate deacetylase; IDP01334, fruct phosphate, carbohydrate metabolism, hydrolase; HET: F6P; 2.53A {Vibrio cholerae} PDB: 3egj_A*
Probab=99.70 E-value=1.9e-16 Score=145.29 Aligned_cols=108 Identities=18% Similarity=0.199 Sum_probs=82.9
Q ss_pred EEEECcEEEeCCCc-eeeeEEEeCCEEEEeeCCCCCCCCceEEeCCCCeeecccccccccccCC--CCCCCChhhHHHHH
Q 020079 55 ILIKGGTVVNAHHQ-QIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAME--FMGSETIDDFFSGQ 131 (331)
Q Consensus 55 ~~i~n~~i~~~~~~-~~~~v~i~~g~I~~ig~~~~~~~~~~~id~~g~~v~PG~ID~H~H~~~~--~~~~~~~~~~~~~~ 131 (331)
++|+|++|++++.. .+++|+|+||+|.+|++....+++.++||++|++|+|||||+|+|.... +....+++.+....
T Consensus 5 ~~i~n~~i~~~~~~~~~~~i~I~dG~I~~i~~~~~~~~~~~viD~~G~~v~PGfID~HvHg~~G~~~~d~~~~e~l~~~~ 84 (381)
T 3iv8_A 5 YALTNCKIYTGNDVLVKHAVIINGDKIEAVCPIESLPSEMNVVDLNGANLSPGFIDLQLNGCGGVMFNDEITAETIDTMH 84 (381)
T ss_dssp EEEEEEEEECSSCEESSEEEEEETTEEEEEEEGGGSCTTCEEEEEEEEEEEECEEEEEECEETTEETTTSCSHHHHHHHH
T ss_pred EEEEccEEEcCCCeEeccEEEEECCEEEEEeCCCCCCCCCeEEECCCCEEccCeEeeeecccCCCCCCCCCCHHHHHHHH
Confidence 68999999998764 4679999999999999865444567899999999999999999997643 11224678889999
Q ss_pred HHHHhCCceEEecCcCCCCC-cHHHHHHHHHH
Q 020079 132 AAALAGGTTMHIDFVIPING-SLTAGFEAYEK 162 (331)
Q Consensus 132 ~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~ 162 (331)
+.++++|||+++++....+. ...+.++.+++
T Consensus 85 ~a~~~~GvTt~l~t~~T~~~e~l~~al~~~~~ 116 (381)
T 3iv8_A 85 KANLKSGCTSFLPTLITSSDENMRQAIAAARE 116 (381)
T ss_dssp HHHHHTTEEEEEEEEESCCHHHHHHHHHHHHH
T ss_pred HHHHhCCccccccccCCCCHHHHHHHHHHHHH
Confidence 99999999999976543332 33444444433
No 62
>4ep8_C Urease subunit alpha; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1ef2_A* 4epb_C* 4epd_C* 4epe_C* 1ejx_C* 1ejw_C* 1fwj_C* 1kra_C 2kau_C* 1a5k_C 1ejv_C* 1ejt_C* 1eju_C* 1ejs_C* 1a5m_C 1a5n_C 1ejr_C* 1a5l_C 1a5o_C 1fwa_C* ...
Probab=99.65 E-value=4.2e-15 Score=144.48 Aligned_cols=170 Identities=18% Similarity=0.193 Sum_probs=109.8
Q ss_pred CCccEEEECcEEEeCCCceeeeEEEeCCEEEEeeCCC----------CCCCCceEEeCCCCeeecccccccccccCCCCC
Q 020079 51 SSSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNI----------NVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMG 120 (331)
Q Consensus 51 ~~~~~~i~n~~i~~~~~~~~~~v~i~~g~I~~ig~~~----------~~~~~~~~id~~g~~v~PG~ID~H~H~~~~~~~ 120 (331)
...|++|+|++|+|++++.+++|+|+||||++||+.. ..++++++||++|++|+|||||+|+|+.++ +
T Consensus 63 ~~~DlvI~Na~Ivd~~Gi~kaDIlIkDGrIaaIG~ag~pd~~d~vdl~~~~g~eVIDA~GkiV~PG~ID~HvH~~~~--~ 140 (566)
T 4ep8_C 63 DCVDLVLTNALIVDHWGIVKADIGVKDGRIFAIGKAGNPDIQPNVTIPIGAATEVIAAEGKIVTAGGIDTHIHWICP--Q 140 (566)
T ss_dssp GSCSEEEEEEEEEETTEEEEEEEEEETTEEEEEECEECTTTCSSCCEECCTTCEEEECTTCEEEECEEEEEEECSCT--T
T ss_pred CCCCEEEECcEEECCCCeEEeEEEEECCEEEEeecCCCcccccccccccCCCCEEEECCCCEEEcCEEEecccccCC--C
Confidence 3568999999999998888999999999999999732 123578999999999999999999999876 2
Q ss_pred CCChhhHHHHHHHHHhCCceEEecCcCCC--------CCcHHHHHHHHHHHhccceeeccccccccCCChhhHHHHHHHH
Q 020079 121 SETIDDFFSGQAAALAGGTTMHIDFVIPI--------NGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMV 192 (331)
Q Consensus 121 ~~~~~~~~~~~~~~l~~GvTtv~d~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (331)
. . ......+.++........ ....................++.+......... .....+.
T Consensus 141 ~-----~----~~a~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~---~~~~~~~ 208 (566)
T 4ep8_C 141 Q-----A----EEALVSGVTTMVGGGTGPAAGTHATTCTPGPWYISRMLQAADSLPVNIGLLGKGNVSQP---DALREQV 208 (566)
T ss_dssp H-----H----HHHHHHTEEEEEEECSSSSHHHHHCCCCCHHHHHHHHHHHHTTSSSEEEEEEECCCSCH---HHHHHHH
T ss_pred c-----c----chhhhhhHHHHhhCceEEEEecCCCCCchHHHHHHHHHHhccccceeeeeecccccccc---hhhHHHh
Confidence 1 1 112223333333111110 112333334444444445566655544433332 2333333
Q ss_pred HHhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEcCCch
Q 020079 193 KEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGD 239 (331)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~ 239 (331)
..+...++.+..+ .............+...+.....|.+...
T Consensus 209 -~a~~~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 250 (566)
T 4ep8_C 209 -AAGVIGLKIHEDW----GATPAAIDCALTVADEMDIQVALHSDTLN 250 (566)
T ss_dssp -HHTCSEEEEEGGG----CCCHHHHHHHHHHHHHHTCEEEEECCTTC
T ss_pred -hhccccccccccc----cccchhhhhHhHHHHHhcchhhhhhhhHH
Confidence 5677777765543 24567777888888889999999975443
No 63
>3mtw_A L-arginine carboxypeptidase CC2672; hydrolase; HET: KCX M3R; 1.70A {Caulobacter vibrioides}
Probab=99.63 E-value=2.1e-14 Score=130.42 Aligned_cols=184 Identities=15% Similarity=0.148 Sum_probs=107.3
Q ss_pred EEEECcEEEeCCC---ceeeeEEEeCCEEEEeeCCCCC-CCCceEEeCCCCeeecccccccccccCCCCCCC-----Chh
Q 020079 55 ILIKGGTVVNAHH---QQIADVYVEDGIVVAVQPNINV-GDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSE-----TID 125 (331)
Q Consensus 55 ~~i~n~~i~~~~~---~~~~~v~i~~g~I~~ig~~~~~-~~~~~~id~~g~~v~PG~ID~H~H~~~~~~~~~-----~~~ 125 (331)
.+|+|++|+|+.. .++++|+|+||||++||+..+. +++.++||++|++|+|||||+|+|+........ ..+
T Consensus 4 ~aI~narviD~~~g~~i~~~~V~I~dG~I~~Ig~~~~~~~~~~~vID~~G~~v~PG~ID~H~H~~~~~~~~~~~~~~~~~ 83 (403)
T 3mtw_A 4 KAVSAARLLDVASGKYVDNPLVIVTDGRITSIGKKGDAVPAGATAVDLPGVTLLPGLIDMHVHLDSLAEVGGYNSLEYSD 83 (403)
T ss_dssp EEEEEEEEEETTTTEEEESEEEEEETTEEEEEEETTCCCCTTCEEEEEEEEEEEECEEEEEECTTCCTTCCGGGGGGSCH
T ss_pred EEEEceEEEECCCCcEecCcEEEEECCEEEEEeCCCCCCCCCCEEEECCCCEEEeChheeeeCCccccccCccccccccH
Confidence 7899999999764 4689999999999999986543 456799999999999999999999976521110 011
Q ss_pred hHH-----HHHHHHHhCCceEEecCcCCCCCcHHHHHHHHHHHhcc-ce--eecc-------cccc-------------c
Q 020079 126 DFF-----SGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKN-SC--MDYG-------FHMA-------------I 177 (331)
Q Consensus 126 ~~~-----~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~-------~~~~-------------~ 177 (331)
... ......+..|+|+..+....... ............. .. .... .... .
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (403)
T 3mtw_A 84 RFWSVVQTANAKKTLEAGFTTVRNVGAADYD--DVGLREAIDAGYVPGPRIVTAAISFGATGGHCDSTFFPPSMDQKNPF 161 (403)
T ss_dssp HHHHHHHHHHHHHHHHTTEEEEEECCCSTTH--HHHHHHHHHTTSSCCCEEEECCSCEESTTSTTSCCSSCGGGCCCCTT
T ss_pred HHHhhhhhhhhhhccccccceeecccccccc--chhhhhhhhcccccccccccccccccccccccccccccccccccccc
Confidence 111 12234577899999877543321 1111111111100 00 0000 0000 0
Q ss_pred cCC-ChhhHHHHHHHHHHhCCCeEEEEEec--------CCCCcCCHHHHHHHHHHHHHcCCcEEEEcCCchhh
Q 020079 178 TKW-DEVVSDEMEVMVKEKGINSFKFFMAY--------KGSFMINDELLIEGFKRCKSLGALAMVHAENGDAV 241 (331)
Q Consensus 178 ~~~-~~~~~~~~~~~~~~~g~~~ik~~~~~--------~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~ 241 (331)
... ..+......... ..+....+..... ........+.+.++++.|++.+.++..|.......
T Consensus 162 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 233 (403)
T 3mtw_A 162 NSDSPDEARKAVRTLK-KYGAQVIKICATGGVFSRGNEPGQQQLTYEEMKAVVDEAHMAGIKVAAHAHGASGI 233 (403)
T ss_dssp CCCSHHHHHHHHHHHH-HTTCSEEEEECBCCSSSSSCCTTCBCSCHHHHHHHHHHHHHTTCEEEEEECSHHHH
T ss_pred ccchhHHHhhhhHhhh-hhcchhhhhhhccccccccccccccccCHHHHHHHHHHHHHcCCeEEEEeccchhH
Confidence 000 011122222222 3455544433221 12234568899999999999999999998655443
No 64
>3ggm_A Uncharacterized protein BT9727_2919; bacillus cereus group., structural genomics, PSI-2, protein structure initiative; 2.00A {Bacillus thuringiensis serovarkonkukian}
Probab=99.63 E-value=7.4e-16 Score=110.09 Aligned_cols=65 Identities=20% Similarity=0.398 Sum_probs=55.9
Q ss_pred ccEEEECcEEEeCCC--ceeeeEEEeCCEEEEeeCCCCC---CCCceEEeCCCCeeecccccccccccCC
Q 020079 53 SKILIKGGTVVNAHH--QQIADVYVEDGIVVAVQPNINV---GDDVKVLDATGKFVMPGGIDPHTHLAME 117 (331)
Q Consensus 53 ~~~~i~n~~i~~~~~--~~~~~v~i~~g~I~~ig~~~~~---~~~~~~id~~g~~v~PG~ID~H~H~~~~ 117 (331)
.+++|+|++|++++. ...++|+|+||+|++|++.... .++.++||++|++|+|||||+|+|+.++
T Consensus 4 ~~~li~n~~i~~~~~~~~~~~~i~I~~g~I~~ig~~~~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~p 73 (81)
T 3ggm_A 4 PDMILYNGKITTLDPSQPEVSAIAITDGLITAVGGDELLNSATEKTKKIDLKRKRAIPGLNDSHIHVIRG 73 (81)
T ss_dssp CSEEEESSEEECSCTTCSEESEEEEETTEEEEEESGGGGGGCCTTCEEEECTTCEEEECCCCTTEEEECC
T ss_pred CCEEEECCEEEeCCCCCccccEEEEECCEEEEEeCchHhcccCCCCEEEECCCCEEeeCeEeeeeCCCCc
Confidence 568999999999764 4678999999999999985432 2356899999999999999999999987
No 65
>3mkv_A Putative amidohydrolase; sargasso SEA, structural genomics, protein structure initiat NEW YORK structural genomix research consortium, nysgxrc; HET: KCX; 2.40A {Undefined}
Probab=99.56 E-value=3.8e-15 Score=135.99 Aligned_cols=66 Identities=29% Similarity=0.514 Sum_probs=58.4
Q ss_pred CccEEEECcEEEeCCC---ceeeeEEEeCCEEEEeeCCCCCCCCceEEeCCCCeeecccccccccccCC
Q 020079 52 SSKILIKGGTVVNAHH---QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAME 117 (331)
Q Consensus 52 ~~~~~i~n~~i~~~~~---~~~~~v~i~~g~I~~ig~~~~~~~~~~~id~~g~~v~PG~ID~H~H~~~~ 117 (331)
|.+++|+|++|+|++. .++++|+|+||||++|++....+++.++||++|++|+|||||+|+|+...
T Consensus 3 M~~lli~ng~i~d~~~~~~~~~~dV~I~~G~I~~Ig~~~~~~~~~~vID~~G~~v~PGfID~H~H~~~~ 71 (426)
T 3mkv_A 3 LTTFLFRNGALLDPDHPDLLQGFEILIEDGFIREVSDKPIKSSNAHVIDVKGKTIMPGLIDLHVHVVAI 71 (426)
T ss_dssp CCEEEEEEEEECCTTSSSCEEEEEEEEETTEEEEEESSCCCCSSCEEEECTTCEEEECEEEEEECTTCC
T ss_pred cCcEEEECeEEEeCCCCcEecCcEEEEECCEEEEecCCCCCCCCCEEEECCCCEEEeChhhhhhCcccc
Confidence 5679999999999874 46789999999999999976666678999999999999999999998765
No 66
>1o12_A N-acetylglucosamine-6-phosphate deacetylase; structural genomics, TM0814, JCSG, PSI, protein structure initiative; 2.50A {Thermotoga maritima} SCOP: b.92.1.5 c.1.9.10
Probab=99.48 E-value=5e-14 Score=129.99 Aligned_cols=70 Identities=24% Similarity=0.328 Sum_probs=56.8
Q ss_pred ceeeeEEEeCCEEEEeeCCCCCCCCceEEeCCCCeeecccccccccccCCCCCCCChhhHHHHHHHHHhCCceEEecCcC
Q 020079 68 QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVI 147 (331)
Q Consensus 68 ~~~~~v~i~~g~I~~ig~~~~~~~~~~~id~~g~~v~PG~ID~H~H~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~ 147 (331)
..+++|+|+||+|++|++ . + || +|++|+|||||+|+|+.++.. ... .++....++++++||||++|+..
T Consensus 27 ~~~~~V~I~~g~I~~vg~-----~--~-iD-~g~~v~PGlID~H~H~~~~~~-~~~-~~l~~~~~~~l~~GvTtv~d~~~ 95 (376)
T 1o12_A 27 EFTGDVEIEEGKIVKVEK-----R--E-CI-PRGVLMPGFVDPHIHGVVGAD-TMN-CDFSEMEEFLYSQGVTTFLATTV 95 (376)
T ss_dssp EEEEEEEEETTEEEEEEE-----C--C-SC-CSSEEEECEEEEEECEETTEE-TTT-TCHHHHHHHHHTTTEEEEEEECC
T ss_pred ccCceEEEECCEEEEeCC-----C--c-cC-CCCEEccCeEEEeecCCCCCC-CCh-hhHHHHHHHHHhCCcEEEEeccC
Confidence 468999999999999987 1 5 99 999999999999999986521 111 13666788899999999999864
Q ss_pred C
Q 020079 148 P 148 (331)
Q Consensus 148 ~ 148 (331)
.
T Consensus 96 ~ 96 (376)
T 1o12_A 96 S 96 (376)
T ss_dssp S
T ss_pred C
Confidence 3
No 67
>1bf6_A Phosphotriesterase homology protein; hypothetical protein; 1.70A {Escherichia coli} SCOP: c.1.9.3
Probab=98.80 E-value=4.3e-08 Score=86.58 Aligned_cols=131 Identities=13% Similarity=0.089 Sum_probs=64.3
Q ss_pred ccccccccccCCCC--------CCCChhhHHHHHHHHHhCCceEEecCcCCCCC-cHHHHHHHHHHHhccceeeccc---
Q 020079 106 GGIDPHTHLAMEFM--------GSETIDDFFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMDYGF--- 173 (331)
Q Consensus 106 G~ID~H~H~~~~~~--------~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--- 173 (331)
|+||+|+|+..+.. ....++......+.+.++|||+++++...... +.....+..++.+.+.....++
T Consensus 6 G~iD~H~Hl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~~iv~~~~~~~~~~~~~~~~~~~~~~~~v~~~~G~~~~ 85 (291)
T 1bf6_A 6 GYTLAHEHLHIDLSGFKNNVDCRLDQYAFICQEMNDLMTRGVRNVIEMTNRYMGRNAQFMLDVMRETGINVVACTGYYQD 85 (291)
T ss_dssp SEEEEEECSSEECHHHHTCGGGEECCHHHHHHHHHHHHHTTEEEEEECCCGGGTCCHHHHHHHHHHHCCEEEEEECCCCG
T ss_pred ceeeeccCeecCCcccccCCCcccCCHHHHHHHHHHHHHcCCCEEEecCCCcCCCCHHHHHHHHHhcCCeEEEeeccccC
Confidence 99999999974310 01122344455667788999999988753221 2332222222222122222222
Q ss_pred --cccc-cCCChhhH-HHHHHHHHHhCCC-------eEEE-EEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEcCC
Q 020079 174 --HMAI-TKWDEVVS-DEMEVMVKEKGIN-------SFKF-FMAYKGSFMINDELLIEGFKRCKSLGALAMVHAEN 237 (331)
Q Consensus 174 --~~~~-~~~~~~~~-~~~~~~~~~~g~~-------~ik~-~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~ 237 (331)
+... .....+.+ +.+.+.. ..|+. .++. .+++........+.+++.++.|+++|+|+.+|+++
T Consensus 86 ~~hP~~~~~~~~~~l~~~~~~~l-~~gi~~~~~~~~~iGe~gld~~~~~~~~~~~~~~~~~~a~~~~~pv~iH~~~ 160 (291)
T 1bf6_A 86 AFFPEHVATRSVQELAQEMVDEI-EQGIDGTELKAGIIAEIGTSEGKITPLEEKVFIAAALAHNQTGRPISTHTSF 160 (291)
T ss_dssp GGCCTHHHHSCHHHHHHHHHHHH-HTCSTTSSCCEEEEEEEECBTTBCCHHHHHHHHHHHHHHHHHCCCEEEECGG
T ss_pred ccCcHhhhcCCHHHHHHHHHHHH-HhccCCcCcceeeEEEEecCCCCCCHHHHHHHHHHHHHHHHHCCeEEEeCCC
Confidence 1100 00111222 2333333 23321 2222 12211111112356888999999999999999864
No 68
>2ob3_A Parathion hydrolase; metalloenzyme, TIM barrel, nerve agents; HET: KCX BTB; 1.04A {Brevundimonas diminuta} PDB: 1psc_A* 1jgm_A* 3cak_A* 1ez2_A* 1eyw_A* 1hzy_A 1i0b_A 1i0d_A 1p6b_A* 1p6c_A* 2oql_A* 2o4q_A* 3cs2_A* 3e3h_A* 1qw7_A* 1dpm_A* 2o4m_A* 1pta_A 3c86_A* 2d2j_A ...
Probab=98.68 E-value=1.4e-07 Score=85.13 Aligned_cols=175 Identities=11% Similarity=0.004 Sum_probs=92.5
Q ss_pred ccccccccccCCCCCC--CCh------hhHHH----HHHHHHhCCceEEecCcCCCC-CcHHHHHHHHHHHhccceeecc
Q 020079 106 GGIDPHTHLAMEFMGS--ETI------DDFFS----GQAAALAGGTTMHIDFVIPIN-GSLTAGFEAYEKKAKNSCMDYG 172 (331)
Q Consensus 106 G~ID~H~H~~~~~~~~--~~~------~~~~~----~~~~~l~~GvTtv~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 172 (331)
||||+|+|+....... ..+ ++... ....+.++|||++++.+.... .+.....+..++.+...+...+
T Consensus 16 GliD~H~HL~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~~~aGV~~iv~~~~~~~~~~~~~~~~la~~~~~~i~~~~G 95 (330)
T 2ob3_A 16 GFTLTHEHICGSSAGFLRAWPEFFGSRKALAEKAVRGLRRARAAGVRTIVDVSTFDIGRDVSLLAEVSRAADVHIVAATG 95 (330)
T ss_dssp CSEEEEECSEECCTTHHHHCGGGGSCHHHHHHHHHHHHHHHHHTTCCEEEECCCGGGTCCHHHHHHHHHHHTCEEECEEE
T ss_pred CCceeeeCeecCCchhccCCCchhhhccCHHHHHHHHHHHHHHcCCCEEEeCCCCCcCCCHHHHHHHHHHhCCcEEEEec
Confidence 9999999998631111 011 22222 256678899999998864321 1233333222222213333344
Q ss_pred ccc--ccc--CCChhhH-HHHHHHHHH----h--CCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEcCC--ch
Q 020079 173 FHM--AIT--KWDEVVS-DEMEVMVKE----K--GINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAEN--GD 239 (331)
Q Consensus 173 ~~~--~~~--~~~~~~~-~~~~~~~~~----~--g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~--~~ 239 (331)
++. +.. ....+.+ +.+.+.... . .+..+++.++ ........+.|++.++.|+++|+|+.+|++. .+
T Consensus 96 ~hp~~p~~~~~~~~~~l~~~l~~~~~~gi~~~~~k~~aiEiGld-~~~~~~q~~~f~~q~~lA~~~glPv~iH~~~~~r~ 174 (330)
T 2ob3_A 96 LWFDPPLSMRLRSVEELTQFFLREIQYGIEDTGIRAGIIKVATT-GKATPFQELVLKAAARASLATGVPVTTHTAASQRD 174 (330)
T ss_dssp CCSCCCHHHHTCCHHHHHHHHHHHHHTCSTTSCCCCSEEEEECS-SSCCHHHHHHHHHHHHHHHHHCCCEEEECCGGGTH
T ss_pred CCcCCCchhccCCHHHHHHHHHHHHHhhccccccceeEEEEeCC-CCCCHHHHHHHHHHHHHHHHhCCeEEEECCCCCCC
Confidence 442 111 1111222 223333211 1 2344555444 1111112344888999999999999999852 21
Q ss_pred hhHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHHHhcCC---CEEEEeCC-CHHHHHHHHHHHHcCCCEEEec
Q 020079 240 AVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNT---PLYVVHVM-SMDAMEEIAKARKAGPNFLNTT 314 (331)
Q Consensus 240 ~~~~~~~~~~~~G~~~~~~~~~~~~~~~e~~~i~~~~~l~~~~g~---~~~i~H~~-~~~~~~~i~~~~~~Gi~v~~~~ 314 (331)
. . +.++++++.|. ++.+.||. +. +.+.++++.++|..++.++
T Consensus 175 a-------------------------------~-e~l~iL~~~g~~~~~~~i~H~f~~~-~~e~a~~~~~~G~~i~~~~ 220 (330)
T 2ob3_A 175 G-------------------------------E-QQAAIFESEGLSPSRVCIGHSDDTD-DLSYLTALAARGYLIGLDH 220 (330)
T ss_dssp H-------------------------------H-HHHHHHHHTTCCGGGEEECSGGGCC-CHHHHHHHHHTTCEEEECC
T ss_pred H-------------------------------H-HHHHHHHHcCcCcccEEEeCCCCCC-CHHHHHHHHhCCCEEEeCC
Confidence 1 1 22344444454 44688985 33 3488889999999888763
No 69
>2vc7_A Aryldialkylphosphatase; phosphotriesterase, promiscuous activities, enzyme evolution, hyperthermophilic, lactonase, hydrolase; HET: KCX GOL HT5; 2.05A {Sulfolobus solfataricus} PDB: 2vc5_A*
Probab=98.66 E-value=7.1e-08 Score=86.29 Aligned_cols=148 Identities=16% Similarity=0.114 Sum_probs=74.1
Q ss_pred ccccccccccCCCCCC--CCh------hhHHH---HHHHHHhCCceEEecCcCCCCC-cHHHHHHHHHHHhccceeeccc
Q 020079 106 GGIDPHTHLAMEFMGS--ETI------DDFFS---GQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMDYGF 173 (331)
Q Consensus 106 G~ID~H~H~~~~~~~~--~~~------~~~~~---~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 173 (331)
||||+|+|+....... ..+ ++... ..+.+.++|||++++....... ......+..++.+.+.....++
T Consensus 17 G~iD~H~Hl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gv~~iv~~~~~~~~~~~~~~~~~~~~~~~~v~~~~G~ 96 (314)
T 2vc7_A 17 GFTLIHEHLRVFSEAVRQQWPHLYNEDEEFRNAVNEVKRAMQFGVKTIVDPTVMGLGRDIRFMEKVVKATGINLVAGTGI 96 (314)
T ss_dssp CSEESSCBSCBCCHHHHHHCGGGCCHHHHHHHHHHHHHHHHHTTCCEEEECCCBTTTCCHHHHHHHHHHHCCEEEECEEB
T ss_pred CCcccccccccCcchhcccCcchhhhcccHHHHHHHHHHHHHcCCCEEEecCCCCCCcCHHHHHHHHHHcCCeEEEEeec
Confidence 9999999997631110 011 11111 2355778999999988644222 2333333233222233333333
Q ss_pred ccccc--CC-ChhhHHHHHHHHH---HhCCC-------eEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEcC-C-c
Q 020079 174 HMAIT--KW-DEVVSDEMEVMVK---EKGIN-------SFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAE-N-G 238 (331)
Q Consensus 174 ~~~~~--~~-~~~~~~~~~~~~~---~~g~~-------~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e-~-~ 238 (331)
+.... .. .+...+++.++.. ..|+. .+++.+++........+.+++.++.|+++|+|+.+|+. . .
T Consensus 97 hp~~~~~~~~~~~~~~~l~~~~~~~~~~gige~G~~~g~i~~~ld~~~~~~~q~~~~~~~~~lA~~~~~pv~iH~~~~~~ 176 (314)
T 2vc7_A 97 YIYIDLPFYFLNRSIDEIADLFIHDIKEGIQGTLNKAGFVKIAADEPGITKDVEKVIRAAAIANKETKVPIITHSNAHNN 176 (314)
T ss_dssp CCSSCCCGGGTTCCHHHHHHHHHHHHHTCSSSSSCCCCSEEEECCTTCSCHHHHHHHHHHHHHHHHHCCCEEEECCTTTT
T ss_pred CCCCCCchhhhccCHHHHHHHHHHHHHhhcccCCCCCCeEEEeecCCCCCHHHHHHHHHHHHHHHHHCCEEEEeCCCccc
Confidence 33111 11 0112344444432 12322 23444444322222235688899999999999999985 2 3
Q ss_pred hhhHHHHHHHHHcCCC
Q 020079 239 DAVFEGQKRMIELGIT 254 (331)
Q Consensus 239 ~~~~~~~~~~~~~G~~ 254 (331)
.. .+..+.+.+.|+.
T Consensus 177 ~~-~~~~~~l~~~~~~ 191 (314)
T 2vc7_A 177 TG-LEQQRILTEEGVD 191 (314)
T ss_dssp HH-HHHHHHHHHTTCC
T ss_pred Ch-HHHHHHHHHcCCC
Confidence 22 3444556666654
No 70
>1zzm_A Putative deoxyribonuclease YJJV; hydrolaze, zinc, PEG, structural genomics, PSI; HET: P33; 1.80A {Escherichia coli} SCOP: c.1.9.12
Probab=98.63 E-value=1.1e-06 Score=76.35 Aligned_cols=125 Identities=17% Similarity=0.132 Sum_probs=69.2
Q ss_pred cccccccccCCCCCCCChhhHHHHHHHHHhCCceEEecCcCCCCCcHHHHHHHHHHHhccceeecccccccc-CCChhhH
Q 020079 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAIT-KWDEVVS 185 (331)
Q Consensus 107 ~ID~H~H~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 185 (331)
+||+|+|+.... ...+.....+.+.++||+++++.+... .+.... ....+..+......+++.... ...++..
T Consensus 5 ~iD~H~Hl~~~~----~~~~~~~~l~~~~~~Gv~~~v~~~~~~-~~~~~~-~~l~~~~~~~~~~~G~hP~~~~~~~~~~~ 78 (259)
T 1zzm_A 5 FIDTHCHFDFPP----FSGDEEASLQRAAQAGVGKIIVPATEA-ENFARV-LALAENYQPLYAALGLHPGMLEKHSDVSL 78 (259)
T ss_dssp EEESCBCTTSTT----TTTCHHHHHHHHHHTTEEEEEEECCSG-GGHHHH-HHHHHHCTTEEEEECCCGGGGGGCCHHHH
T ss_pred EEEeeecCCchh----hccCHHHHHHHHHHcCCCEEEEecCCH-HHHHHH-HHHHHhCCCeEEEEEecccccccCCHHHH
Confidence 899999998651 122344446678889999998764322 222222 222233333222333332211 1223456
Q ss_pred HHHHHHHHH--hCCCeEEE-EEecCCC---CcCCHHHHHHHHHHHHHcCCcEEEEcCC
Q 020079 186 DEMEVMVKE--KGINSFKF-FMAYKGS---FMINDELLIEGFKRCKSLGALAMVHAEN 237 (331)
Q Consensus 186 ~~~~~~~~~--~g~~~ik~-~~~~~~~---~~~~~~~l~~~~~~A~~~g~~v~~H~e~ 237 (331)
++++++..+ .++.+++. .++++.. .....+.+++.++.|+++|+|+.+|+.+
T Consensus 79 ~~l~~~~~~~~~~~~~iGEiGld~~~~~~~~~~q~~~f~~~~~~a~~~~~Pv~iH~~~ 136 (259)
T 1zzm_A 79 EQLQQALERRPAKVVAVGEIGLDLFGDDPQFERQQWLLDEQLKLAKRYDLPVILHSRR 136 (259)
T ss_dssp HHHHHHHHHCCSSEEEEEEEEEECCSSCCCHHHHHHHHHHHHHHHHHTTCCEEEEEES
T ss_pred HHHHHHHhcCCCCEEEEEEeccCCCCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEecc
Confidence 777776644 23334422 2333211 1123457889999999999999999854
No 71
>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida}
Probab=98.46 E-value=5.4e-06 Score=73.02 Aligned_cols=125 Identities=14% Similarity=0.156 Sum_probs=72.5
Q ss_pred cccccccccCCCCCCCChhhHHHHHHHHHhCCceEEecCcCCCCCcHHHHHHHHHHHhcc----ceeeccccccc-cCCC
Q 020079 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKN----SCMDYGFHMAI-TKWD 181 (331)
Q Consensus 107 ~ID~H~H~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~-~~~~ 181 (331)
|||+|+|+.... ..++.....+.+.+.||..++..+... .+....+ .+.+..+. ....++++... ....
T Consensus 3 ~iD~H~HL~~~~----~~~d~~~vl~~a~~~gV~~~v~~g~~~-~~~~~~~-~la~~~~~~~~~v~~~~GiHP~~~~~~~ 76 (287)
T 3rcm_A 3 LIDIGVNLTNSS----FHDQQAAIVERALEAGVTQMLLTGTSL-AVSEQAL-ELCQQLDASGAHLFATAGVHPHDAKAWD 76 (287)
T ss_dssp EEEEEECTTCGG----GTTCHHHHHHHHHHTTEEEEEECCCSH-HHHHHHH-HHHHHHCTTSSSEEEEECCCGGGGGGCC
T ss_pred eEEEeecCCchh----cccCHHHHHHHHHHcCCeEEEEecCCH-HHHHHHH-HHHHhCCCCCceEEEEEEECcCccccCC
Confidence 799999998641 123455557778899999887553211 1222222 22222232 33444444322 2223
Q ss_pred hhhHHHHHHHHHHhCCCeEEEE-EecCCCC---cCCHHHHHHHHHHHHHcCCcEEEEcCC
Q 020079 182 EVVSDEMEVMVKEKGINSFKFF-MAYKGSF---MINDELLIEGFKRCKSLGALAMVHAEN 237 (331)
Q Consensus 182 ~~~~~~~~~~~~~~g~~~ik~~-~~~~~~~---~~~~~~l~~~~~~A~~~g~~v~~H~e~ 237 (331)
++.+++++++++...+.+|... +++.... ....+.|++.++.|+++++|+.+|+.+
T Consensus 77 ~~~~~~l~~l~~~~~vvaIGEiGLD~~~~~~~~~~Q~~~F~~ql~lA~e~~lPv~iH~r~ 136 (287)
T 3rcm_A 77 TDSERQLRLLLSEPRVRAVGECGLDFNRDFSPRPLQEKALEAQLTLAAQLRLPVFLHERD 136 (287)
T ss_dssp TTHHHHHHHHHTSTTEEEEEEEEEETTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEES
T ss_pred HHHHHHHHHHhcCCCeEEEEEeeeCCCcccCcHHHHHHHHHHHHHHHHHhCCCEEEEcCC
Confidence 4556777777733444555433 4443211 113567899999999999999999854
No 72
>1xwy_A DNAse TATD, deoxyribonuclease TATD; TIM barrael, zinc ION, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.1.9.12
Probab=98.42 E-value=9.2e-06 Score=70.53 Aligned_cols=125 Identities=10% Similarity=0.117 Sum_probs=66.6
Q ss_pred cccccccccCCCCCCCChhhHHHHHHHHHhCCceEEecCcCCCCCcHHHHHHHHHHHhccceeeccccccc-cCCChhhH
Q 020079 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAI-TKWDEVVS 185 (331)
Q Consensus 107 ~ID~H~H~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 185 (331)
+||+|+|+.... ...+.....+.+.++||+++++..... ..... +....+..+......+++... ....++..
T Consensus 5 ~iD~H~Hl~~~~----~~~~~~~~l~~~~~~Gv~~~v~~~~~~-~~~~~-~~~l~~~~~~i~~~~G~hP~~~~~~~~~~~ 78 (264)
T 1xwy_A 5 MFDIGVNLTSSQ----FAKDRDDVVACAFDAGVNGLLITGTNL-RESQQ-AQKLARQYSSCWSTAGVHPHDSSQWQAATE 78 (264)
T ss_dssp CEEEEECTTSGG----GTTTHHHHHHHHHHTTCCEEEECCCSH-HHHHH-HHHHHHHSTTEEEEECCCGGGGGGCCHHHH
T ss_pred EEEEeeCCCChh----hccCHHHHHHHHHHCCCCEEEEeCCCH-HHHHH-HHHHHHhCCCEEEEEEECCcccccCCHHHH
Confidence 899999997641 112344445667889999988764321 11222 222222222222222333211 11223455
Q ss_pred HHHHHHHHHhCCCeEEE-EEecCCCC---cCCHHHHHHHHHHHHHcCCcEEEEcCC
Q 020079 186 DEMEVMVKEKGINSFKF-FMAYKGSF---MINDELLIEGFKRCKSLGALAMVHAEN 237 (331)
Q Consensus 186 ~~~~~~~~~~g~~~ik~-~~~~~~~~---~~~~~~l~~~~~~A~~~g~~v~~H~e~ 237 (331)
++++++.+..++.+++. .+++.... ....+.+++.++.|+++|+|+.+|+.+
T Consensus 79 ~~l~~~~~~~~~~~iGE~Gld~~~~~~~~~~q~~~f~~~l~~a~~~~lpv~iH~~~ 134 (264)
T 1xwy_A 79 EAIIELAAQPEVVAIGECGLDFNRNFSTPEEQERAFVAQLRIAADLNMPVFMHCRD 134 (264)
T ss_dssp HHHHHHHTSTTEEEEEEEEEETTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEES
T ss_pred HHHHHHhcCCCeEEEEEeccCCCCCCCcHHHHHHHHHHHHHHHHHhCCcEEEEcCC
Confidence 66777663333444433 23332111 111346889999999999999999843
No 73
>2y1h_A Putative deoxyribonuclease tatdn3; hydrolase; 2.50A {Homo sapiens}
Probab=98.40 E-value=1.7e-05 Score=69.18 Aligned_cols=126 Identities=14% Similarity=0.090 Sum_probs=69.7
Q ss_pred ccccccccccCCCCCCCChhhHHHHHHHHHhCCceEEecCcCCCCCcHHHHHHHHHHHhc-cceeeccccccc-cC----
Q 020079 106 GGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAK-NSCMDYGFHMAI-TK---- 179 (331)
Q Consensus 106 G~ID~H~H~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~---- 179 (331)
++||+|+|+.... ...+.....+.+.++||+++++.+... .+.....+ ..+..+ +.....+++... ..
T Consensus 5 ~~iD~H~Hl~~~~----~~~~~~~~l~~~~~~Gv~~~v~~~~~~-~~~~~~~~-l~~~~~~~i~~~~GihP~~~~~~~~~ 78 (272)
T 2y1h_A 5 GLVDCHCHLSAPD----FDRDLDDVLEKAKKANVVALVAVAEHS-GEFEKIMQ-LSERYNGFVLPCLGVHPVQGLPPEDQ 78 (272)
T ss_dssp CEEEEEECTTSGG----GTTTHHHHHHHHHHTTEEEEEECCSSG-GGHHHHHH-HHHHTTTTEEEEECCCSBC-------
T ss_pred cEEEEeeCCCchh----hhcCHHHHHHHHHHCCCCEEEEeCCCH-HHHHHHHH-HHHHCCCCEEEEEEECCCcccccccc
Confidence 5999999998641 112344446677889999998775432 12222222 223333 233333444322 11
Q ss_pred --CChhhHHHHHHHHHH--hCCCeEEEE-EecCCCC-------cCCHHHHHHHHHHHHHcCCcEEEEcCC
Q 020079 180 --WDEVVSDEMEVMVKE--KGINSFKFF-MAYKGSF-------MINDELLIEGFKRCKSLGALAMVHAEN 237 (331)
Q Consensus 180 --~~~~~~~~~~~~~~~--~g~~~ik~~-~~~~~~~-------~~~~~~l~~~~~~A~~~g~~v~~H~e~ 237 (331)
...+.++++.+++.+ ..+.+++.. ++++... ....+.|++.++.|+++|+|+.+|+.+
T Consensus 79 ~~~~~~~~~~l~~~~~~~~~~~~~iGE~Gld~~~~~~~~~~~~~~q~~~f~~~~~la~~~~lPv~iH~~~ 148 (272)
T 2y1h_A 79 RSVTLKDLDVALPIIENYKDRLLAIGEVGLDFSPRFAGTGEQKEEQRQVLIRQIQLAKRLNLPVNVHSRS 148 (272)
T ss_dssp CBCCHHHHHHHHHHHHHHGGGCSEEEEEECCCCTTTCCSHHHHHHHHHHHHHHHHHHHHHTCCEEEECTT
T ss_pred ccCCHHHHHHHHHHHHhCCCCEEEEEeccCCCccccCCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEeCC
Confidence 122345666666633 244555432 2221111 112457889999999999999999854
No 74
>3ipw_A Hydrolase TATD family protein; niaid, ssgcid, seattle structural genomics center for infect disease, dysentery, liver abcess; 1.95A {Entamoeba histolytica hm-1}
Probab=98.26 E-value=1.3e-05 Score=71.62 Aligned_cols=130 Identities=13% Similarity=-0.011 Sum_probs=73.3
Q ss_pred ccccccccccCCCC-C-----CCChhhHHHHHHHHHhCCceEEecCcCCCCCcHHHHHHHHHHHhc-----cceeecccc
Q 020079 106 GGIDPHTHLAMEFM-G-----SETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAK-----NSCMDYGFH 174 (331)
Q Consensus 106 G~ID~H~H~~~~~~-~-----~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 174 (331)
-|||+|+|+..+.. + ....++.......+.+.||..++..+... .+....++ +.+..+ .....++++
T Consensus 27 ~~iDtH~HL~~~~f~g~y~gk~~h~~d~~~vl~rA~~aGV~~ii~~g~~~-~~~~~~~~-La~~~~~~~~~~v~~~~GiH 104 (325)
T 3ipw_A 27 QFIDIGANLTDDNYFGNYHGKHYHEEDIDVVLQRAERNGLSHIIITSGCL-NDFKKAIE-IINKYQNLTNIKLVTTIGVH 104 (325)
T ss_dssp CEEEEEECTTSGGGGTEETTEECSCCCHHHHHHHHHHTTEEEEEECCCSH-HHHHHHHH-HHHHHGGGCSSEEEEEECCC
T ss_pred CeEEEEECCCchHhccccccccccccCHHHHHHHHHHcCCcEEEEccCCH-HHHHHHHH-HHHHCCCcccceEEEEEEEC
Confidence 58999999987521 1 01134555667788899999988654321 12222222 222333 334444444
Q ss_pred cccc-CCChh-hHHHHHHHHHHh--CCCeEEE-EEecCCCC----cCCHHHHHHHHHHHHH-cCCcEEEEcCC
Q 020079 175 MAIT-KWDEV-VSDEMEVMVKEK--GINSFKF-FMAYKGSF----MINDELLIEGFKRCKS-LGALAMVHAEN 237 (331)
Q Consensus 175 ~~~~-~~~~~-~~~~~~~~~~~~--g~~~ik~-~~~~~~~~----~~~~~~l~~~~~~A~~-~g~~v~~H~e~ 237 (331)
.... ...++ .+++++++++.. .+.+|.. .+++.... ....+.|++.+++|++ +++|+.+|+.+
T Consensus 105 P~~~~~~~~~~~l~~L~~l~~~~~~~vvAIGEiGLD~~~~~~~~~~~Q~~~F~~ql~lA~e~~~lPviiH~r~ 177 (325)
T 3ipw_A 105 PTRTNELKQEGYLDELLLLCEKNIDKVVAIGEIGLDYERLQFSDKETQLSGYRTLSILHQKYPYLPFFFHCRK 177 (325)
T ss_dssp GGGGGGGGSTTHHHHHHHHHHHTGGGEEEEEEEEEETTCCSSSCHHHHHHHHHHTHHHHHHCTTCCEEEEEES
T ss_pred cchhhcCCchHHHHHHHHHHhcCCCCEEEEEeeecCCCcCCCCCHHHHHHHHHHHHHHHHHhhCCeEEEEeCc
Confidence 3221 12222 567777777432 3444433 33432111 1124678899999999 99999999854
No 75
>4i6k_A Amidohydrolase family protein; enzyme function initiative, isomerase, structural; HET: CIT; 2.28A {Acinetobacter baumannii}
Probab=98.24 E-value=1.3e-05 Score=70.94 Aligned_cols=127 Identities=13% Similarity=-0.008 Sum_probs=69.2
Q ss_pred eecccccccccccCCCCC-----CCC---hhhHHHHHHHHHhCCceEEecCcCCCCC-cHHHHHHHHHHHhccceee-cc
Q 020079 103 VMPGGIDPHTHLAMEFMG-----SET---IDDFFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMD-YG 172 (331)
Q Consensus 103 v~PG~ID~H~H~~~~~~~-----~~~---~~~~~~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~ 172 (331)
+=|++||+|+|+...-.. ... ..+.......+-+.||..++-....... .....++..+ ..+..... ..
T Consensus 23 ~p~~~iDtH~Hl~~~~~p~~~~~~~~p~~~~~~e~~l~~~~~~GV~~~V~v~~~~~~~~n~~~~~~~~-~~p~r~~g~~~ 101 (294)
T 4i6k_A 23 MKMNCIDTHAHVFSTQDHSIETARYAPDYEATVQSFISHLDEHNFTHGVLVQPSFLGTNNQAMLNAIQ-QYPDRLKGIAV 101 (294)
T ss_dssp --CCSEEEEECCBCTTSCCCTTCSCCCCSCBCHHHHHHHHHHTTCCEEEEECCGGGTTCCHHHHHHHH-HSTTTEEEEEC
T ss_pred CCCCceEeeeEeecCCCCCCCCCCCCCCCCCCHHHHHHHHHHcCCCeEEEecCcccccchHHHHHHHH-HCCCeEEEEEE
Confidence 445789999999864110 000 2334444666778999887744321111 1111222222 22211111 11
Q ss_pred ccccccCCChhhHHHHHHHHHHhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEcCC
Q 020079 173 FHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAEN 237 (331)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~ 237 (331)
++. ....++++++. +.|+.+++.............+.+...++.|+++|+++.+|+..
T Consensus 102 v~P------~~~~~eL~~l~-~~gv~Gi~l~~~~~~~~~~~~~~~~~~~~~a~~~glpv~iH~~~ 159 (294)
T 4i6k_A 102 VQH------TTTFNELVNLK-AQGIVGVRLNLFGLNLPALNTPDWQKFLRNVESLNWQVELHAPP 159 (294)
T ss_dssp CCT------TCCHHHHHHHH-TTTEEEEEEECTTSCCCCSSSHHHHHHHHHHHHTTCEEEEECCH
T ss_pred eCC------cccHHHHHHHH-HCCCcEEEeccCCCCCCCcccHHHHHHHHHHHHcCCEEEEeeCc
Confidence 111 11235666666 56888888544222222346689999999999999999999853
No 76
>3gg7_A Uncharacterized metalloprotein; structural genomics, unknown function, plasmid, PSI-2, protein structure initiative; 1.50A {Deinococcus radiodurans} SCOP: c.1.9.0
Probab=98.12 E-value=4.4e-06 Score=72.16 Aligned_cols=119 Identities=13% Similarity=0.096 Sum_probs=65.4
Q ss_pred cccccccccCCCCCCCChhhHHHHHHHHHhCCceEEecCcCCCCCcHHHHHHHHHHHhccceeeccccccccCCChhhHH
Q 020079 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSD 186 (331)
Q Consensus 107 ~ID~H~H~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (331)
+||+|+|+... ++.......+.+.||..+.- +....+....+ .+.+..+.....++++........+.++
T Consensus 3 liDtH~HL~~~-------~d~~~vl~~a~~~gV~~i~v--~~~~~~~~~~~-~la~~~~~v~~~~GiHP~~~~~~~~~l~ 72 (254)
T 3gg7_A 3 LIDFHVHLDLY-------PDPVAVARACEERQLTVLSV--TTTPAAWRGTL-ALAAGRPHVWTALGFHPEVVSERAADLP 72 (254)
T ss_dssp CEEEEECGGGS-------SSHHHHHHHHHHTTCEEEEC--CSSGGGHHHHH-GGGTTCTTEEECBCCCGGGTTTTGGGTH
T ss_pred eEEEeeCCCCC-------CCHHHHHHHHHHCCCcEEEe--cCCHHHHHHHH-HHHHhCCCeEEEEeeCcccccccHHHHH
Confidence 89999999854 24444466778899988662 22222222222 2222223334444555432222224455
Q ss_pred HHHHHHHHhCCCeEEE-EEecCC----CCcCCHHHHHHHHHHHHHcCCcEE-EEcCC
Q 020079 187 EMEVMVKEKGINSFKF-FMAYKG----SFMINDELLIEGFKRCKSLGALAM-VHAEN 237 (331)
Q Consensus 187 ~~~~~~~~~g~~~ik~-~~~~~~----~~~~~~~~l~~~~~~A~~~g~~v~-~H~e~ 237 (331)
.+.++. . .+..|.. .+++.. ......+.|++.+++|+++++|+. +|+.+
T Consensus 73 ~l~~~~-~-~~vaIGEiGLD~~~~~~~~~~~Q~~~F~~ql~lA~e~~lPviSiH~r~ 127 (254)
T 3gg7_A 73 WFDRYL-P-ETRFVGEVGLDGSPSLRGTWTQQFAVFQHILRRCEDHGGRILSIHSRR 127 (254)
T ss_dssp HHHHHG-G-GCSEEEEEECCCCGGGGGGHHHHHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred HHHHHh-h-hccEEEEEecCCCcccCCCHHHHHHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 666665 2 2344433 223221 111234668899999999999998 99864
No 77
>3guw_A Uncharacterized protein AF_1765; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 3.20A {Archaeoglobus fulgidus dsm 4304}
Probab=98.07 E-value=8.1e-05 Score=64.51 Aligned_cols=164 Identities=15% Similarity=0.089 Sum_probs=86.8
Q ss_pred cccccccccCCCCCCCChhhHHHHHHHHHhCCceEEecCcCCCCC--cHH---HHHHHHHH-------Hh-ccceeeccc
Q 020079 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPING--SLT---AGFEAYEK-------KA-KNSCMDYGF 173 (331)
Q Consensus 107 ~ID~H~H~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~--~~~---~~~~~~~~-------~~-~~~~~~~~~ 173 (331)
|||+|+|+... . .+ ..+.+..+||+.++..+..... ... +..+...+ .. ...+..+++
T Consensus 2 ~iDtH~Hld~~--~---~~----~l~~a~~~GV~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~~~~v~~~~Gi 72 (261)
T 3guw_A 2 YFDSHLHSEGL--G---FS----ELVKLKENGIKEVCSLAFFPVKPKYPQTMIDVFRKLTEFEPLRCEAAGVKMHPAVGI 72 (261)
T ss_dssp CCBCCCCGGGC--C---HH----HHHHHHTTSCCEECCBCCCSSCCSSHHHHHHHHHHHHHTHHHHHHTTTCEECCBCCC
T ss_pred eEEeccCCCCC--C---hH----HHHHHHHCCCcEEEEeccCccccchhhhHHHHHHHHHHHHHHHHHHCCCCEEEEEEE
Confidence 79999999864 1 12 2456788999998855432211 111 11222211 11 122333444
Q ss_pred cccccCCChhhHHHHHHHHHHhCCCeEEEE-EecCCCCcCCHHHHHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHHHcC
Q 020079 174 HMAITKWDEVVSDEMEVMVKEKGINSFKFF-MAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELG 252 (331)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~-~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~~~G 252 (331)
+..... +. .++..+..++..+.+|... +++. .....+.|++.+++|+++++|+.+|+......
T Consensus 73 HP~~~~--~~-~~~~~~~l~~~~vvaIGEiGLD~~--~~~Q~~~f~~ql~lA~e~~lPv~iH~r~~~~~----------- 136 (261)
T 3guw_A 73 HPRCIP--PD-YEFVLGYLEEGEWVAFGEIGLELV--TDEEIEVLKSQLELAKRMDVPCIIHTPRGNKL----------- 136 (261)
T ss_dssp CGGGCC--TT-THHHHHHHTTSCCSCEEEEECSSC--CHHHHHHHHHHHHHHHHHTCCEEEECCSSSTT-----------
T ss_pred Cccccc--cc-HHHHHHHhCcCCeEEEEEecCCCC--hHHHHHHHHHHHHHHHHhCCeEEEEcCCCccc-----------
Confidence 432211 11 1222233323455566433 3322 12235578999999999999999998643100
Q ss_pred CCCcccccccCChHHHHHHHHHHHHHHHhcCC---CEEEEeCCCHHHHHHHHHHHHcCCCEEEecCC
Q 020079 253 ITGPEGHALSRPPLLEGEATTRAIRLAEFVNT---PLYVVHVMSMDAMEEIAKARKAGPNFLNTTIP 316 (331)
Q Consensus 253 ~~~~~~~~~~~~~~~e~~~i~~~~~l~~~~g~---~~~i~H~~~~~~~~~i~~~~~~Gi~v~~~~~p 316 (331)
.+..+.++++++.+. +..+.||+ .+.++++.+.|..++..++|
T Consensus 137 -----------------~a~~~~~~il~~~~~~~~~~vi~H~~----~~~a~~~l~~G~yis~~~~p 182 (261)
T 3guw_A 137 -----------------KATRKTLEILESLDFPADLAVIDHVN----FETLDMVLETEYWIGLTVQP 182 (261)
T ss_dssp -----------------HHHHHHHHHHHHTTCCTTSEEEESCC----TTTHHHHHTSSSEEEEECC-
T ss_pred -----------------chHHHHHHHHHHcCCCCCCEEEEeCC----HHHHHHHHhCCEEEEecCCC
Confidence 122334455555543 35577883 25567777889888876443
No 78
>1yix_A Deoxyribonuclease YCFH; TIM barrel, zinc ION, NEW YORK SGX center for structural genomics, nysgxrc; 1.90A {Escherichia coli} SCOP: c.1.9.12
Probab=97.99 E-value=7e-05 Score=64.82 Aligned_cols=126 Identities=17% Similarity=0.124 Sum_probs=62.5
Q ss_pred cccccccccCCCCCCCChhhHHHHHHHHHhCCceEEecCcCCCCCcHHHHHHHHHHHhccceeeccccccccCCChhhHH
Q 020079 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSD 186 (331)
Q Consensus 107 ~ID~H~H~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (331)
+||+|+|+....... ...+.....+.+.+.||+.++..... . ...+.+....+..+......+++.... ......+
T Consensus 3 ~iD~H~Hl~~~~~~~-~~~~~~~~l~~~~~~Gv~~~v~~~~~-~-~~~~~~~~~~~~~p~~~~~~g~hP~~~-~~~~~~~ 78 (265)
T 1yix_A 3 LVDSHCHLDGLDYES-LHKDVDDVLAKAAARDVKFCLAVATT-L-PSYLHMRDLVGERDNVVFSCGVHPLNQ-NDPYDVE 78 (265)
T ss_dssp EEEEEECGGGSCTTT-TCSSHHHHHHHHHHTTEEEEEECCSS-H-HHHHHHHHHHCSCTTEEEEECCCTTCC-SSCCCHH
T ss_pred EEEEeeCCCchhhcc-cccCHHHHHHHHHHCCCCEEEEeCCC-H-HHHHHHHHHHHHCCCeEEEEEeCCCcc-cccchHH
Confidence 799999998652100 02234444666778999998765321 1 111112222212122111122221111 1001256
Q ss_pred HHHHHHHHhCCCeEEE-EEecCC---CCcCCHHHHHHHHHHHHHcCCcEEEEcC
Q 020079 187 EMEVMVKEKGINSFKF-FMAYKG---SFMINDELLIEGFKRCKSLGALAMVHAE 236 (331)
Q Consensus 187 ~~~~~~~~~g~~~ik~-~~~~~~---~~~~~~~~l~~~~~~A~~~g~~v~~H~e 236 (331)
+++++.+...+..+.. .+.... ......+.+.+.++.|+++|+|+.+|+.
T Consensus 79 ~l~~~~~~~~~~~iGe~Gl~~~~~~~~~~~q~~~~~~~~~~a~~~~~pv~iH~~ 132 (265)
T 1yix_A 79 DLRRLAAEEGVVALGETGLDYYYTPETKVRQQESFIHHIQIGRELNKPVIVHTR 132 (265)
T ss_dssp HHHHHHTSTTEEEEEEEEEECTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred HHHHHhccCCeEEEEccccCCCcCCCChHHHHHHHHHHHHHHHHhCCCEEEEec
Confidence 6766663222223322 122221 1122356788999999999999999984
No 79
>1j6o_A TATD-related deoxyribonuclease; structural genomics, TM0667, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.80A {Thermotoga maritima} SCOP: c.1.9.12
Probab=97.98 E-value=2.9e-05 Score=67.62 Aligned_cols=125 Identities=13% Similarity=0.112 Sum_probs=64.9
Q ss_pred ccccccccccCCCCCCCChhhHHHHHHHHHhCCceEEecCcCCCCCcHHHHHHHHHHHhccceeeccccccc-cCCChhh
Q 020079 106 GGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAI-TKWDEVV 184 (331)
Q Consensus 106 G~ID~H~H~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 184 (331)
-++|+|+|+.... ...+.....+.+.++||+.++...... ...+.+....+..+.....++++... ....++.
T Consensus 12 ~~~~~~~hl~~~~----~~~~~~~~l~~~~~~GV~~~v~~~~~~--~~~~~~~~l~~~~p~i~~~~G~hP~~~~~~~~~~ 85 (268)
T 1j6o_A 12 HMVDTHAHLHFHQ----FDDDRNAVISSFEENNIEFVVNVGVNL--EDSKKSLDLSKTSDRIFCSVGVHPHDAKEVPEDF 85 (268)
T ss_dssp CEEEEEECTTSGG----GTTTHHHHHHTTTTTTEEEEEEECSSH--HHHHHHHHHHTTCTTEEEEECCCGGGGGGCCTTH
T ss_pred cccccccCCCChh----hccCHHHHHHHHHHcCCCEEEEeCCCH--HHHHHHHHHHHHCCCEEEEEeeccccccccCHHH
Confidence 3689999998651 123444445667789999888654311 11122222222222222222222211 1112344
Q ss_pred HHHHHHHHHHhCCCeEEE-EEecCC---CCcCCHHHHHHHHHHHHHcCCcEEEEcC
Q 020079 185 SDEMEVMVKEKGINSFKF-FMAYKG---SFMINDELLIEGFKRCKSLGALAMVHAE 236 (331)
Q Consensus 185 ~~~~~~~~~~~g~~~ik~-~~~~~~---~~~~~~~~l~~~~~~A~~~g~~v~~H~e 236 (331)
+++++++.+...+..++. .+.... ......+.+++.++.|+++|+|+.+|+.
T Consensus 86 ~~~l~~~~~~~~~~~iGe~Gld~~~~~~~~~~q~~~f~~~~~~a~~~~lPv~iH~~ 141 (268)
T 1j6o_A 86 IEHLEKFAKDEKVVAIGETGLDFFRNISPAEVQKRVFVEQIELAGKLNLPLVVHIR 141 (268)
T ss_dssp HHHHHHHTTSTTEEEEEEEEEETTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred HHHHHHHhccCCEEEEEccccCCcccCCChHHHHHHHHHHHHHHHHhCCCEEEEeC
Confidence 566666652222223322 123221 1123467789999999999999999985
No 80
>2xio_A Putative deoxyribonuclease tatdn1; hydrolase; 1.19A {Homo sapiens}
Probab=97.93 E-value=1e-05 Score=71.81 Aligned_cols=130 Identities=10% Similarity=0.016 Sum_probs=66.6
Q ss_pred ccccccccccCCCCCC------CChhhHHHHHHHHHhCCceEEecCcCCCCCcHHHHHHHHHHHhccceeeccccccccC
Q 020079 106 GGIDPHTHLAMEFMGS------ETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITK 179 (331)
Q Consensus 106 G~ID~H~H~~~~~~~~------~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (331)
.+||+|+|+....... ....+.....+.+.++||++++..+... .+. ..+....+..+......+++.....
T Consensus 2 ~~iD~H~Hl~~~~~~~~~~~~~~h~~d~~~vl~~~~~~GV~~~v~~~~~~-~~~-~~~~~la~~~~~v~~~~GiHP~~~~ 79 (301)
T 2xio_A 2 KFIDIGINLTDPMFRGIYRGVQKHQDDLQDVIGRAVEIGVKKFMITGGNL-QDS-KDALHLAQTNGMFFSTVGCHPTRCG 79 (301)
T ss_dssp CEEEEEECTTCGGGGTEETTEECSCCCHHHHHHHHHHHTEEEEEECCCSH-HHH-HHHHHHHTTCTTEEEEECCCGGGTH
T ss_pred eEEEEcCCCCChHhcccccccccCccCHHHHHHHHHHCCCCEEEEeCCCH-HHH-HHHHHHHHHCCCEEEEEEECcChhh
Confidence 4899999997652110 0013444456677889999988764311 111 1111222222222222333321110
Q ss_pred -C----ChhhHHHHHHHHHHh--CCCeEEE-EEecCCCC----cCCHHHHHHHHHHHHHcCCcEEEEcCC
Q 020079 180 -W----DEVVSDEMEVMVKEK--GINSFKF-FMAYKGSF----MINDELLIEGFKRCKSLGALAMVHAEN 237 (331)
Q Consensus 180 -~----~~~~~~~~~~~~~~~--g~~~ik~-~~~~~~~~----~~~~~~l~~~~~~A~~~g~~v~~H~e~ 237 (331)
. .++.++++++++++. .+.+|+. .+++.... ....+.|++.++.|+++|+|+.+|+.+
T Consensus 80 ~~~~~~~~~~~~~l~~~~~~~~~~~~aIGEiGLd~~~~~~~~~~~Q~~~f~~ql~lA~~~~lPv~iH~r~ 149 (301)
T 2xio_A 80 EFEKNNPDLYLKELLNLAENNKGKVVAIGECGLDFDRLQFCPKDTQLKYFEKQFELSEQTKLPMFLHCRN 149 (301)
T ss_dssp HHHHHCHHHHHHHHHHHHHTCTTTEEEEEEEEEETTCTTTSCHHHHHHHHHHTHHHHHHHCCCEEEEEES
T ss_pred hCcccccHHHHHHHHHHHhcCCCCeEEEEEeeCCCCcCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEecC
Confidence 0 113356666666332 2334433 23432101 112367889999999999999999843
No 81
>3tn4_A Phosphotriesterase; lactonase, hydrolase; HET: KCX; 1.50A {Geobacillus kaustophilus} PDB: 3tnb_A* 3tn3_A* 3tn5_A* 3tn6_A* 3ojg_A* 3orw_A* 3f4c_A* 3f4d_A*
Probab=97.89 E-value=0.0002 Score=64.87 Aligned_cols=203 Identities=13% Similarity=0.066 Sum_probs=98.6
Q ss_pred ccccccccccCCCCCC--------CChh-hH---HHHHHHHHhCCceEEecCcCCCCCcHHHHHHHHHH-Hhccceeecc
Q 020079 106 GGIDPHTHLAMEFMGS--------ETID-DF---FSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEK-KAKNSCMDYG 172 (331)
Q Consensus 106 G~ID~H~H~~~~~~~~--------~~~~-~~---~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 172 (331)
|++++|-|+...+.+. ...+ .+ ....+...+.|+.|++|.....-+.....+....+ .+-.....-+
T Consensus 52 G~tl~HEHl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~k~~Gg~tIVd~T~~g~GRd~~~l~~is~~tGv~IV~~TG 131 (360)
T 3tn4_A 52 GKTLIHEHFLFGYPGFQGDVTRGTFREDESLRVAVEAAEKMKRHGIQTVVDPTPNDCGRNPAFLRRVAEETGLNIICATG 131 (360)
T ss_dssp CSEESSCEEEECCTTGGGGTTTSCCCHHHHHHHHHHHHHHHHHTTCCEEEECCCTTTTCCHHHHHHHHHHHCCEEEEEEC
T ss_pred CCceeccCeeecChhhhcccccchhhhhhHHHHHHHHHHHHHhcCCCeEEECCCCCcCcCHHHHHHHHHHcCCCEEEeCc
Confidence 8899999975432111 1111 11 22334466799999999876655433333333322 2222222222
Q ss_pred ccccccCCC---------hhhHHHHHHHH-H--HhCCC-------eEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEE
Q 020079 173 FHMAITKWD---------EVVSDEMEVMV-K--EKGIN-------SFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMV 233 (331)
Q Consensus 173 ~~~~~~~~~---------~~~~~~~~~~~-~--~~g~~-------~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~ 233 (331)
++......+ ....+++.++. + ..|++ .||+..+.........+.|++.+++|++.|+|+.+
T Consensus 132 ~y~~~~~~p~~~~~~~~~~~~~e~l~~~~i~Ei~~Gi~~tgikaG~I~~~~~~~~~t~~E~k~frA~a~aa~etG~Pv~i 211 (360)
T 3tn4_A 132 YYYEGEGAPPYFQFRRLLGTAEDDIYDMFMAELTEGIADTGIKAGVIKLASSKGRITEYEKMFFRAAARAQKETGAVIIT 211 (360)
T ss_dssp CCCGGGSCTHHHHHHHHHTCHHHHHHHHHHHHHHTCSTTSCCCCSEEEEECBTTBCCHHHHHHHHHHHHHHHHHCCEEEE
T ss_pred cccCcccCCcccchhhhcccCHHHHHHHHHHHHHhccccCCCcceEEEEEccCCCCCHHHHHHHHHHHHHHHHhCCcEEE
Confidence 221110000 00112222221 1 23332 35654433322222356689999999999999999
Q ss_pred EcCCchhhHHHHHHHHHcCCCCccc---ccccCChHHHHHHHHHHHHHHHhcCCCEEEEeCC---------CHHHHHHHH
Q 020079 234 HAENGDAVFEGQKRMIELGITGPEG---HALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVM---------SMDAMEEIA 301 (331)
Q Consensus 234 H~e~~~~~~~~~~~~~~~G~~~~~~---~~~~~~~~~e~~~i~~~~~l~~~~g~~~~i~H~~---------~~~~~~~i~ 301 (331)
|........+..+.+.+.|....+. |.+..+ .. +.++.+.+.|+-+.+.... .....+.++
T Consensus 212 Ht~~~~~~~e~l~iL~eeG~~~~~vvi~H~~~~~-d~------~~~~~~l~~G~yl~fD~iG~~~~~~~p~d~~r~~~l~ 284 (360)
T 3tn4_A 212 HTQEGTMGPEQAAYLLEHGADPKKIVIGHMCDNT-DP------DYHRKTLAYGVYIAFDRFGIQGMVGAPTDEERVRTLL 284 (360)
T ss_dssp ECSTTCCHHHHHHHHHHTTCCGGGEEECCGGGCC-CH------HHHHHHHTTTCEEEECCTTCCCSTTCCCHHHHHHHHH
T ss_pred EcCcccCCHHHHHHHHHcCCCCCceEEEcCCCCC-CH------HHHHHHHHcCCEEEEcccccccccCCCChHHHHHHHH
Confidence 9854433223445567777754432 321111 11 1122333456666555432 134456677
Q ss_pred HHHHcCC--CEEEecC
Q 020079 302 KARKAGP--NFLNTTI 315 (331)
Q Consensus 302 ~~~~~Gi--~v~~~~~ 315 (331)
++.++|. +|..++.
T Consensus 285 ~lv~~g~~drILLstD 300 (360)
T 3tn4_A 285 ALLRDGYEKQIMLSHD 300 (360)
T ss_dssp HHHHTTCGGGEEECCC
T ss_pred HHHHhcCcceEEEecC
Confidence 7777664 3555444
No 82
>3pnz_A Phosphotriesterase family protein; amidohydrolase fold; HET: KCX; 1.60A {Listeria monocytogenes serotype 4b strorganism_taxid} SCOP: c.1.9.0
Probab=97.86 E-value=0.00012 Score=65.59 Aligned_cols=202 Identities=12% Similarity=0.006 Sum_probs=98.2
Q ss_pred ccccccccccCCCC----------CCCChhhHHHHHHHHHhCCceEEecCcCCCCCcHHHHHHHHH-HHhccceeecccc
Q 020079 106 GGIDPHTHLAMEFM----------GSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYE-KKAKNSCMDYGFH 174 (331)
Q Consensus 106 G~ID~H~H~~~~~~----------~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 174 (331)
|++.+|=|+..... .....+......+...+.|++|++|+....-+.....+.... +.+.+....-+++
T Consensus 17 G~t~~HEHl~~~~~~~~~~~~~~~~l~~~~~~~~el~~~~~~G~~tiVd~t~~~~gR~~~~l~~is~~tgv~iv~~TG~y 96 (330)
T 3pnz_A 17 GFTYSHEHIVCVPAYWQERDADDLLLDDKEKSQLDVQDFADLGGKTIVDATAVDYGRRVLDVAQISKETGIQIVGTAGFN 96 (330)
T ss_dssp CSEEEEECCSBCCHHHHTTTCGGGCBCCHHHHHHHHHHHHHTTCCEEEECCCGGGCBCHHHHHHHHHHHCCEEEEEEECC
T ss_pred CCceeccCceecChhhhhcCCCcccccCHHHHHHHHHHHHHhCCCEEEECCCCccccCHHHHHHHHHHhCCEEEEeCCCC
Confidence 78888999865310 011223344455667789999999997554443333333332 2332222222222
Q ss_pred cccc--------------------C-----CChhhHHHHHHHHHHhCC-----Ce--EEEEEecCCCCcCCHHHHHHHHH
Q 020079 175 MAIT--------------------K-----WDEVVSDEMEVMVKEKGI-----NS--FKFFMAYKGSFMINDELLIEGFK 222 (331)
Q Consensus 175 ~~~~--------------------~-----~~~~~~~~~~~~~~~~g~-----~~--ik~~~~~~~~~~~~~~~l~~~~~ 222 (331)
.... . ..++..+.+.+-+ ..|+ .. +++.++++.......+.|++.++
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~ei-~~Gi~~t~vkaGvIEiGld~~~~~~~q~~~f~aq~~ 175 (330)
T 3pnz_A 97 KSFLWDGKIKPELKPIIGDFETYYEWIENTTTDKLTEFVVNEV-ENGLEGTPYKAGQVKFGTGYNMITPLEEKTIRAVAR 175 (330)
T ss_dssp CGGGGGSBCCGGGHHHHCSCSBHHHHHHTSCHHHHHHHHHHHH-HTCSTTSSCCEEEEEEECBTTBCCHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccCchhhccCCHHHHHHHHHHHH-HhhCCCcCcCcCeEEEEcCCCCCCHHHHHHHHHHHH
Confidence 1100 0 0111112222222 2333 22 56655554333334567889999
Q ss_pred HHHHcCCcEEEEcCCchhhHHHHHHHHHcCCCCccc---ccccCChHHHHHHHHHHHHHHHhcCCCEEEEeCCC------
Q 020079 223 RCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEG---HALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMS------ 293 (331)
Q Consensus 223 ~A~~~g~~v~~H~e~~~~~~~~~~~~~~~G~~~~~~---~~~~~~~~~e~~~i~~~~~l~~~~g~~~~i~H~~~------ 293 (331)
.|++.|+|+.+|+.......+..+.+.+.|...... |+...+ ..+ .+..+.+.|.-+.+....+
T Consensus 176 ~A~~~glPViiH~r~g~~a~~~l~iL~e~~~~~~~vvi~H~~~s~-~~e------~a~~~l~~G~~i~~~g~~t~~~~~~ 248 (330)
T 3pnz_A 176 AHHETKAPIHSHTEAGTMALEQIEILKQENIPLEYLSIGHMDRNL-DPY------YHKQVAKTGAFMSFDGIAKIKYAPE 248 (330)
T ss_dssp HHHHHCCCEEEECGGGCCHHHHHHHHHHTTCCGGGEEETTGGGSC-CHH------HHHHHHTTTCEEEECCTTCTTTCCH
T ss_pred HHHHHCCeEEEeCCCCcChHHHHHHHHHcCCCCCeEEEecCCCCC-CHH------HHHHHHHcCcEEEEccCcccCCCCh
Confidence 999999999999854211122245566666543221 221111 111 1222334566555555432
Q ss_pred HHHHHHHHHHHHcCC--CEEEecC
Q 020079 294 MDAMEEIAKARKAGP--NFLNTTI 315 (331)
Q Consensus 294 ~~~~~~i~~~~~~Gi--~v~~~~~ 315 (331)
....+.++++.++|. ++.+++.
T Consensus 249 ~~~~~~l~~lv~~g~~drilleTD 272 (330)
T 3pnz_A 249 SARIAAILYLVSEGFEDQILVSGD 272 (330)
T ss_dssp HHHHHHHHHHHHTTCGGGEEECCC
T ss_pred HHHHHHHHHHHHcCCCCeEEEeCC
Confidence 223455666666663 3555544
No 83
>3cjp_A Predicted amidohydrolase, dihydroorotase family; structural genomics, protein structure initiative; 1.85A {Clostridium acetobutylicum atcc 824}
Probab=97.85 E-value=0.00031 Score=61.01 Aligned_cols=51 Identities=14% Similarity=-0.012 Sum_probs=37.9
Q ss_pred hhHHHHHHHHHHhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHc-CCcEEEEcCC
Q 020079 183 VVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL-GALAMVHAEN 237 (331)
Q Consensus 183 ~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~-g~~v~~H~e~ 237 (331)
+..++++++.++.|..+++.+.-.. . ..+.+..+++.|+++ |+|+.+|+..
T Consensus 102 ~~~~el~~~~~~~g~~gi~~~g~~~---~-~~~~~~~~~~~a~~~~~lpv~iH~~~ 153 (272)
T 3cjp_A 102 DTNSYIEENIVNNKLVGIGELTPAS---G-QIKSLKPIFKYSMDSGSLPIWIHAFN 153 (272)
T ss_dssp HHHHHHHHHTTTTTCSEEEEECCCT---T-CGGGGHHHHHHHHHTTCCCEEECCST
T ss_pred HHHHHHHHHHHhcCceEEEecCCCC---C-ccHHHHHHHHHHHhccCCcEEEeCCC
Confidence 4566777766456888887653221 2 567899999999999 9999999864
No 84
>3ovg_A Amidohydrolase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, NYSGXRC, HAD, PSI; HET: KCX; 2.06A {Mycoplasma synoviae} PDB: 3msr_A*
Probab=97.85 E-value=0.00033 Score=63.51 Aligned_cols=147 Identities=19% Similarity=0.124 Sum_probs=77.5
Q ss_pred ccccccccccCCCC---------CCCChhhHHHHHHHHHhCCceEEecCcCCCCCcHHHHHHHHHHH----hccceeecc
Q 020079 106 GGIDPHTHLAMEFM---------GSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKK----AKNSCMDYG 172 (331)
Q Consensus 106 G~ID~H~H~~~~~~---------~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 172 (331)
|++.+|=|+...+. .....+......+.+.+.|++|++|.....-+.....+....+. +-.....-+
T Consensus 21 G~tl~HEHl~~~~~~~~~~~~~~~l~d~~~~~~el~~~~~~G~~tiVd~t~~~~GRd~~~l~~is~~t~~~Gv~Iv~~TG 100 (363)
T 3ovg_A 21 GITDCHDHFIKNGGPEVEEHIDFLMLNVDASIKEFKEFIDRGGSTIVTMDPPNVGRDVLKTLEIANAVKNLGGNVIMSTG 100 (363)
T ss_dssp CEEEEEECSCBCSSHHHHHCGGGCBCCHHHHHHHHHHHHHTTEEEEEECCCTTTTCCHHHHHHHHHHHGGGTCEEEEEEE
T ss_pred CCceeccceeccCChhhccCCcccccCHHHHHHHHHHHHHhCCCeEEEeCCCccCCCHHHHHHHHHhcccCCcEEEEeCC
Confidence 88899999865321 11223344445556678999999998755444333334433333 233222222
Q ss_pred cccccc-----C-----CChhhHHHHHHHHHHhCC-----------------CeEEEEEecCCCCcCCHHHHHHHHHHHH
Q 020079 173 FHMAIT-----K-----WDEVVSDEMEVMVKEKGI-----------------NSFKFFMAYKGSFMINDELLIEGFKRCK 225 (331)
Q Consensus 173 ~~~~~~-----~-----~~~~~~~~~~~~~~~~g~-----------------~~ik~~~~~~~~~~~~~~~l~~~~~~A~ 225 (331)
++.... . ..++..+.+.+-+ ..|+ ..||+..+++.......+.|++.+++|+
T Consensus 101 ~y~~~~~~~~~~~~~~~~~e~l~~~~~~ei-~~Gi~~~~~~gp~~~~t~ikaG~ikig~s~~~~t~~Q~~~f~aq~~~A~ 179 (363)
T 3ovg_A 101 FHKAKFYDKYSSWLAVVPTEEIVKMCVAEI-EEGMDEYNYNGPVVKRSKAKAGIIKAGTGYGAIDRLELKALEVAARTSI 179 (363)
T ss_dssp CCCGGGSCTTTSHHHHSCHHHHHHHHHHHH-HTCCBTTTTSSSCCCBCSCCCCEEEEEEEETBEEHHHHHHHHHHHHHHH
T ss_pred CCcCcccccCcHhhhcCCHHHHHHHHHHHH-HhcccccccccccccCCCccCCEEEEEeCCCCCCHHHHHHHHHHHHHHH
Confidence 222111 0 0122222222222 2332 2357666665333334567899999999
Q ss_pred HcCCcEEEEcCC-chhhHHHHHHHHHcCCC
Q 020079 226 SLGALAMVHAEN-GDAVFEGQKRMIELGIT 254 (331)
Q Consensus 226 ~~g~~v~~H~e~-~~~~~~~~~~~~~~G~~ 254 (331)
+.|+||.+|+.. .... +..+.+.+.|..
T Consensus 180 e~glPViiH~r~gr~a~-d~l~iL~e~g~~ 208 (363)
T 3ovg_A 180 LTGCPILVHTQLGTMAL-EVAKHLIGFGAN 208 (363)
T ss_dssp HHCCCEEEEEETTCSHH-HHHHHHHHHTCC
T ss_pred HhCCEEEEeCCCCCCHH-HHHHHHHhcCCC
Confidence 999999999853 2222 333445555543
No 85
>2ffi_A 2-pyrone-4,6-dicarboxylic acid hydrolase, putativ; TIM-barrel protein., structural genomics, PSI, protein struc initiative; 2.61A {Pseudomonas putida} SCOP: c.1.9.15
Probab=97.75 E-value=5.2e-05 Score=66.52 Aligned_cols=125 Identities=10% Similarity=0.036 Sum_probs=68.3
Q ss_pred ccccccccccCCCC----C----CCChhhHHHHHHHHHhCCceEEecCcCC-CCCcHHHHHHHHHHHhccceeecccccc
Q 020079 106 GGIDPHTHLAMEFM----G----SETIDDFFSGQAAALAGGTTMHIDFVIP-INGSLTAGFEAYEKKAKNSCMDYGFHMA 176 (331)
Q Consensus 106 G~ID~H~H~~~~~~----~----~~~~~~~~~~~~~~l~~GvTtv~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (331)
++||+|+|+..+.. + .....+.....+.+-+.||+..+-.... ........++..+ ..+.-...+ ..
T Consensus 13 ~iID~H~Hl~~~~~~~~~~~~~~~~~~~~~~~~l~~m~~~GV~~~v~~~~~~~~~~n~~~~~~~~-~~p~r~~~~---~~ 88 (288)
T 2ffi_A 13 TAIDSHAHVFSRGLNLASQRRYAPNYDAPLGDYLGQLRAHGFSHGVLVQPSFLGTDNRYLLSALQ-TVPGQLRGV---VM 88 (288)
T ss_dssp CCEEBCCCCBCHHHHHHTTCCSSCCSCBCHHHHHHHHHHTSCCEECCBCCGGGTTCCHHHHHHHH-HSTTTBCCB---BC
T ss_pred CceeecccccCCCCCCCCcccCCCCCCCCHHHHHHHHHHhCCCeEEEECCccccccHHHHHHHHH-HCCCCEEEE---EE
Confidence 68999999975410 0 0001223333555667999976644321 1111222222222 222101111 11
Q ss_pred ccCCChhhHHHHHHHHHHhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEcCC
Q 020079 177 ITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAEN 237 (331)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~ 237 (331)
+. +....++++++. +.|..++++...+.+....+++.+..+++.|+++|+++.+|+..
T Consensus 89 v~--p~~~~~el~~~~-~~g~~Gi~~~~~~~~~~~~~~~~~~~~~~~a~~~~lpv~iH~~~ 146 (288)
T 2ffi_A 89 LE--RDVEQATLAEMA-RLGVRGVRLNLMGQDMPDLTGAQWRPLLERIGEQGWHVELHRQV 146 (288)
T ss_dssp CC--SSCCHHHHHHHH-TTTCCEEECCCSSSCCCCTTSTTTHHHHHHHHHHTCEEEECSCT
T ss_pred eC--CCCCHHHHHHHH-HCCCeEEEEecccCCCCCcccHHHHHHHHHHHHCCCeEEEeech
Confidence 11 111135677766 56888887765543223456678999999999999999999854
No 86
>2gzx_A Putative TATD related DNAse; deoxyribonuclease, NESG, ZR237, structural GENO PSI, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=97.74 E-value=0.00034 Score=60.38 Aligned_cols=125 Identities=16% Similarity=0.088 Sum_probs=64.4
Q ss_pred cccccccccCCCCCCCChhhHHHHHHHHHhCCceEEecCcCCCCCcHHHHHHHHHHHhccceeeccccccc-cCCChhhH
Q 020079 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAI-TKWDEVVS 185 (331)
Q Consensus 107 ~ID~H~H~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 185 (331)
+||+|+|+.... ...+.....+.+.+.||+.++...... ...+.+....+..+......+++... ....++..
T Consensus 2 ~iD~H~Hl~~~~----~~~~~~~~l~~~~~~Gv~~~v~~~~~~--~~~~~~~~~~~~~p~~~~~~g~~P~~~~~~~~~~~ 75 (265)
T 2gzx_A 2 LIDTHVHLNDEQ----YDDDLSEVITRAREAGVDRMFVVGFNK--STIERAMKLIDEYDFLYGIIGWHPVDAIDFTEEHL 75 (265)
T ss_dssp CEEEEECTTSGG----GTTTHHHHHHHHHHTTCCEEEEEECSH--HHHHHHHHHHHHCTTEEEEECCCGGGGGGCCHHHH
T ss_pred eEEEeeCCCCcc----cccCHHHHHHHHHHcCCCEEEEeCCCH--HHHHHHHHHHHhCCCEEEEEEeccCccccCCHHHH
Confidence 699999997641 112344445667789998877654321 11122222222222211111222111 11112345
Q ss_pred HHHHHHHHHhCCCeEEEE-EecCC---CCcCCHHHHHHHHHHHHHcCCcEEEEcCC
Q 020079 186 DEMEVMVKEKGINSFKFF-MAYKG---SFMINDELLIEGFKRCKSLGALAMVHAEN 237 (331)
Q Consensus 186 ~~~~~~~~~~g~~~ik~~-~~~~~---~~~~~~~~l~~~~~~A~~~g~~v~~H~e~ 237 (331)
++++++.+..++.+++.. +.... ......+.+.+.++.|+++|+|+.+|+..
T Consensus 76 ~~l~~~~~~~~~~~iGe~Gl~~~~~~~~~~~~~~~~~~~~~~a~~~~~pv~iH~~~ 131 (265)
T 2gzx_A 76 EWIESLAQHPKVIGIGEMGLDYHWDKSPADVQKEVFRKQIALAKRLKLPIIIHNRE 131 (265)
T ss_dssp HHHHHHTTSTTEEEEEEEEEECSCCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEES
T ss_pred HHHHHHhcCCCEEEEEeccCCCCCCCCCHHHHHHHHHHHHHHHHHcCCcEEEEecc
Confidence 666665522233344322 22211 11234567899999999999999999853
No 87
>3k2g_A Resiniferatoxin-binding, phosphotriesterase- related protein; TIM barrel, binuclear zinc, protein structure initiative II (PSI II); 1.80A {Rhodobacter sphaeroides 2}
Probab=97.74 E-value=0.0004 Score=63.10 Aligned_cols=109 Identities=13% Similarity=0.056 Sum_probs=54.4
Q ss_pred HHHHHHHHHhCCceEEecCcCCCCCcHHHHHHHHHHHhc-cceeeccccccccC---CChhhHHHHHHHHHH---hCC--
Q 020079 127 FFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAK-NSCMDYGFHMAITK---WDEVVSDEMEVMVKE---KGI-- 197 (331)
Q Consensus 127 ~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~---~g~-- 197 (331)
.....+.+.++||+++++............+.+..+... ......+++..... ......+++.++..+ .|+
T Consensus 88 ~~~~l~~~~~aGv~tiV~~t~~g~gr~~~~l~~la~~~gv~i~~~tG~y~~~~~P~~~~~~~~~~L~~~~~~ei~~Gi~~ 167 (364)
T 3k2g_A 88 AIAEVKQFAAVGGRSIVDPTCRGIGRDPVKLRRISAETGVQVVMGAGYYLASSMPETAARLSADDIADEIVAEALEGTDG 167 (364)
T ss_dssp HHHHHHHHHHTTCCEEEECCCBTTTCCHHHHHHHHHHHCCEEEECCSBCCGGGCCGGGGTCCHHHHHHHHHHHHHTCBTT
T ss_pred HHHHHHHHHhcCCCeEEEeCCCcccCCHHHHHHHHHHhCCcEEEEeCccCCCCCchhhccCCHHHHHHHHHHHHHhcccc
Confidence 334556678899999999874322222333333333322 33333344311110 011123444333211 222
Q ss_pred -----CeEE-EEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEcC
Q 020079 198 -----NSFK-FFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAE 236 (331)
Q Consensus 198 -----~~ik-~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e 236 (331)
..|+ +.+++ .......+.|++.++.|++.|+||.+|+.
T Consensus 168 ~~vkag~IGEiGld~-~~t~~q~~~f~aq~~~A~~~glPV~iH~~ 211 (364)
T 3k2g_A 168 TDARIGLIGEIGVSS-DFTAEEEKSLRGAARAQVRTGLPLMVHLP 211 (364)
T ss_dssp BSCCCSSEEEEECCT-TCCHHHHHHHHHHHHHHHHHCCCEEEECC
T ss_pred CCcceeEEEEEEcCC-CCCHHHHHHHHHHHHHHHHHCCeEEEecC
Confidence 1243 33333 11122345688899999999999999984
No 88
>3gtx_A Organophosphorus hydrolase; mutant, amidohydrolase, alpha-beta barrel; HET: KCX; 1.62A {Deinococcus radiodurans} PDB: 2zc1_A* 3gti_A* 3gu9_A* 3gtf_A* 3gth_A* 3gu2_A* 3gu1_A* 3fdk_A* 3htw_A*
Probab=97.73 E-value=0.0003 Score=63.35 Aligned_cols=148 Identities=17% Similarity=0.163 Sum_probs=74.5
Q ss_pred ccccccccccCCCCCC--------CCh-hhH---HHHHHHHHhCCceEEecCcCCCCC-cHHHHHHHHHHHhccceeecc
Q 020079 106 GGIDPHTHLAMEFMGS--------ETI-DDF---FSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMDYG 172 (331)
Q Consensus 106 G~ID~H~H~~~~~~~~--------~~~-~~~---~~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 172 (331)
|++.+|=|+.....+. ... +++ ....+.+.++||+++++....... +.....+..++.+...+...+
T Consensus 32 G~t~~HEHl~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~a~~aGv~tiV~~~~~~~~r~~~~l~~la~~~g~~i~~~tG 111 (339)
T 3gtx_A 32 GATLPHEHVIFGYPGYAGDVTLGPFDHAAALASCTETARALLARGIQTVVDATPNGCGRNPAFLREVSEATGLQILCATG 111 (339)
T ss_dssp CEEEEEEEEEECCTTGGGGTTTSCCCHHHHHHHHHHHHHHHHHTTEEEEEECCCTTTTCCHHHHHHHHHHHCCEEECEEC
T ss_pred CCeeeccCeeccCcccccCCCccccchHHHHHHHHHHHHHHHHhCCCeEEecCCCccCcCHHHHHHHHHHcCCcEEEEcC
Confidence 8888899985432111 111 122 234455788999999988643222 333333323322323333334
Q ss_pred ccccc------cCCC---hhhHHHHHHHHHH---hCC-------CeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEE
Q 020079 173 FHMAI------TKWD---EVVSDEMEVMVKE---KGI-------NSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMV 233 (331)
Q Consensus 173 ~~~~~------~~~~---~~~~~~~~~~~~~---~g~-------~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~ 233 (331)
++... .... ....+++.++..+ .|+ ..+++.++++.......+.|++.++.|++.|+|+.+
T Consensus 112 ~hp~~~~~~~~~~~~~~~~~~~~~L~~~~~~e~~~gIg~tg~k~g~IEigld~~~~~~~q~~~f~aq~~lA~~~glPVii 191 (339)
T 3gtx_A 112 FYYEGGGATTYFKFRASLGDAESEIYEMMRTEVTEGIAGTGIRAGVIKLASSRDAITPYEQLFFRAAARVQRETGVPIIT 191 (339)
T ss_dssp CCCTTTSSCHHHHHHHHHSCHHHHHHHHHHHHHHTCSTTSSCCCSEEEEECCSSCCCHHHHHHHHHHHHHHHHHCCCEEE
T ss_pred CCccCccCCcCCcccccccCCHHHHHHHHHHHHHhcccccCcccceEEEEcCCCCCCHHHHHHHHHHHHHHHHHCCeEEE
Confidence 43310 0000 0123445443322 121 234666666533223355788899999999999999
Q ss_pred EcCC-chhhHHHHHHHHHcCCC
Q 020079 234 HAEN-GDAVFEGQKRMIELGIT 254 (331)
Q Consensus 234 H~e~-~~~~~~~~~~~~~~G~~ 254 (331)
|+.. .... +..+.+.+.|..
T Consensus 192 H~~~gr~a~-~~~~iL~~~~~~ 212 (339)
T 3gtx_A 192 HTQEGQQGP-QQAELLTSLGAD 212 (339)
T ss_dssp ECSTTCCHH-HHHHHHHHTTCC
T ss_pred eCCCCcCHH-HHHHHHHHcCCC
Confidence 9843 2222 234445555543
No 89
>4d9a_A 2-pyrone-4,6-dicarbaxylate hydrolase; structural genomics, protein structure initiative; HET: 0GY; 1.35A {Sphingomonas paucimobilis} PDB: 4d95_A* 4di8_A* 4di9_A* 4d9d_A 4dia_A 2qah_A 4d8l_A
Probab=97.70 E-value=0.00027 Score=62.67 Aligned_cols=127 Identities=15% Similarity=0.083 Sum_probs=68.9
Q ss_pred eecccccccccccCCC-----C-C-CCCh--hhHHHHHHHHHhCCceEEecCcCCCCC-cHHHHHHHHHHHhccceeecc
Q 020079 103 VMPGGIDPHTHLAMEF-----M-G-SETI--DDFFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMDYG 172 (331)
Q Consensus 103 v~PG~ID~H~H~~~~~-----~-~-~~~~--~~~~~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 172 (331)
+=||.||+|.|+..+. . + ...+ -........+-..||+..+-....... .....++...+...+ ...+.
T Consensus 23 ~p~~~iDaH~H~~~~~~~~p~~~~~~~~~~~~~~e~l~~~m~~~GI~~~Vlvq~~~~~~dN~~ll~~l~~~~~r-~~Gva 101 (303)
T 4d9a_A 23 PPPGAIDAHCHVFGPMAQFPFSPKAKYLPRDAGPDMLFALRDHLGFARNVIVQASCHGTDNAATLDAIARAQGK-ARGIA 101 (303)
T ss_dssp CCTTCEEEEECCBCCTTTSCCCTTCSCCBCCBCHHHHHHHHHHHTCSEEEEECCGGGTTCCHHHHHHHHHTTTS-EEEEE
T ss_pred CCCCceEeeeEeecCcccCCCCCCCCCcCCCCCHHHHHHHHHHcCCCeEEEeccccccccHHHHHHHHHhCCCc-EEEEE
Confidence 4468999999998631 0 0 0111 112222344456788866533211111 222223333332222 11111
Q ss_pred ccccccCCChhhHHHHHHHHHHhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEcCC
Q 020079 173 FHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAEN 237 (331)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~ 237 (331)
..... ...++++++. +.|+.+++...........+.+.+..+++.+.+ |+++.+|+..
T Consensus 102 -~vdp~----~~~~eL~~l~-~~G~rGvR~~~~~~~~~~~~~~~~~~~~~~l~~-gl~v~l~~~~ 159 (303)
T 4d9a_A 102 -VVDPA----IDEAELAALH-EGGMRGIRFNFLKRLVDDAPKDKFLEVAGRLPA-GWHVVIYFEA 159 (303)
T ss_dssp -CCCTT----CCHHHHHHHH-HTTEEEEEEECCTTTCSCCCHHHHHHHHTSCCT-TCEEEEECCG
T ss_pred -EeCCC----CCHHHHHHHH-HCCCCEEEeecccCCccccCHHHHHHHHHHHhc-CCEEEEeccc
Confidence 11111 1235666666 568889987664432245688999999999999 9999999753
No 90
>3rhg_A Putative phophotriesterase; hydrolase, amidohydrolase, zinc binding site, enzyme functio initiative, EFI; HET: SO4; 1.53A {Proteus mirabilis}
Probab=97.60 E-value=0.0011 Score=60.19 Aligned_cols=22 Identities=14% Similarity=-0.080 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHHc-CCcEEEEc
Q 020079 214 DELLIEGFKRCKSL-GALAMVHA 235 (331)
Q Consensus 214 ~~~l~~~~~~A~~~-g~~v~~H~ 235 (331)
.+.|++.++.|++. |+||.+|+
T Consensus 178 ~~~f~aq~~~A~~~~glPV~iH~ 200 (365)
T 3rhg_A 178 KNSLRAAALAQNNNPYASMNIHM 200 (365)
T ss_dssp HHHHHHHHHHHTTCTTCEEEEEC
T ss_pred HHHHHHHHHHHHHhcCCcEEEEC
Confidence 45688899999999 99999997
No 91
>2dvt_A Thermophilic reversible gamma-resorcylate decarbo; TIM barrel, lyase; 1.70A {Rhizobium SP} SCOP: c.1.9.15 PDB: 2dvu_A* 2dvx_A* 3s4t_A*
Probab=97.58 E-value=0.00011 Score=65.51 Aligned_cols=55 Identities=11% Similarity=0.070 Sum_probs=42.3
Q ss_pred hhHHHHHHHHHHhCCCeEEEEEecCC-----CCcCCHHHHHHHHHHHHHcCCcEEEEcCC
Q 020079 183 VVSDEMEVMVKEKGINSFKFFMAYKG-----SFMINDELLIEGFKRCKSLGALAMVHAEN 237 (331)
Q Consensus 183 ~~~~~~~~~~~~~g~~~ik~~~~~~~-----~~~~~~~~l~~~~~~A~~~g~~v~~H~e~ 237 (331)
+..++++++.++.|..++++...+.. ....+++.+..+++.|+++|+++.+|+..
T Consensus 108 ~~~~el~~~~~~~g~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~lpv~iH~~~ 167 (327)
T 2dvt_A 108 AATEELQRCVNDLGFVGALVNGFSQEGDGQTPLYYDLPQYRPFWGEVEKLDVPFYLHPRN 167 (327)
T ss_dssp HHHHHHHHHHHTTCCCEEEEESSBCCTTCCSCBCTTSGGGHHHHHHHHHHTCCEEEECCC
T ss_pred HHHHHHHHHHhcCCceEEEECCCCCCCcccCCCCCCCcchHHHHHHHHHcCCeEEECCCC
Confidence 46788888875569999987655431 23456788999999999999999999854
No 92
>3rys_A Adenosine deaminase 1; SGX, hydrolase; HET: ADE; 2.60A {Arthrobacter aurescens} SCOP: c.1.9.0
Probab=97.53 E-value=0.0014 Score=59.05 Aligned_cols=122 Identities=13% Similarity=0.031 Sum_probs=72.5
Q ss_pred CCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHHHcCCCCcccccccCChHHHHHHHHHH
Q 020079 196 GINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRA 275 (331)
Q Consensus 196 g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~e~~~i~~~ 275 (331)
++.++.+... ....+.+.+.++++.|++.|+++++|+..........+.+...|... -+|+...... .+.
T Consensus 164 ~vvG~dL~g~---E~~~~~~~~~~~~~~A~~~gl~~~~HagE~~~~~~i~~al~~lg~~r-IgHgv~l~~d------~~l 233 (343)
T 3rys_A 164 PIAGIGLDSA---EVGNPPSKFERLYQRAAEAGLRRIAHAGEEGPASYITEALDVLHVER-IDHGIRCMED------TDV 233 (343)
T ss_dssp CCCEEEEESC---CTTCCGGGGHHHHHHHHHTTCEEEEEESSSSCHHHHHHHHHTSCCSE-EEECGGGGGC------HHH
T ss_pred CEEEEecCCc---ccCCCHHHHHHHHHHHHHCCCeEEEeeCCCCCHHHHHHHHhcCCcce-eeeeeeecCC------hHH
Confidence 4555554322 23446788999999999999999999843322333223333344322 2344322110 245
Q ss_pred HHHHHhcCCCEEEEeCCCHH-------HHHHHHHHHHcCCCEEEecC-Cccccchhhhhhh
Q 020079 276 IRLAEFVNTPLYVVHVMSMD-------AMEEIAKARKAGPNFLNTTI-PLCDSCSNIIRMV 328 (331)
Q Consensus 276 ~~l~~~~g~~~~i~H~~~~~-------~~~~i~~~~~~Gi~v~~~~~-p~~~~~~~~~~~~ 328 (331)
++++++.++.+.+|..|+.. ...+++++.++|++|+.+|. |-.... ++...+
T Consensus 234 ~~~l~~~~i~le~cP~SN~~l~~~~~~~~hPi~~ll~~Gv~V~l~TDdp~~~~~-~l~~E~ 293 (343)
T 3rys_A 234 VQRLVAEQVPLTVCPLSNVRLRAVDKLADHPLPEMLAIGLNVCVNSDDPAYFGG-YVDDNF 293 (343)
T ss_dssp HHHHHHHTCCEEECHHHHHHTTSSSCGGGCSHHHHHHTTCCEEECCBSTTTTTC-CHHHHH
T ss_pred HHHHHhcCCCeeEchhHHHHhCCCCCcccchHHHHHHCCCeEEEeCCCccccCC-CHHHHH
Confidence 67778888887666654321 22478999999999998776 333332 555444
No 93
>3pao_A Adenosine deaminase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; HET: ADE; 2.49A {Pseudomonas aeruginosa} PDB: 3pan_A* 3ou8_A* 3pbm_A*
Probab=97.47 E-value=0.00021 Score=63.96 Aligned_cols=123 Identities=13% Similarity=0.004 Sum_probs=72.9
Q ss_pred CCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHHHcCCCCcccccccCChHHHHHHHHHH
Q 020079 196 GINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRA 275 (331)
Q Consensus 196 g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~e~~~i~~~ 275 (331)
++.++.+.... ...+.+.++++++.|++.|+++++|+..........+.+...|... -+|+...... .+.
T Consensus 161 ~vvG~dL~g~E---~~~~~~~~~~~~~~A~~~gl~~~~HagE~~~~~~i~~al~~lg~~r-igHgv~l~~d------~~l 230 (326)
T 3pao_A 161 AFIAVGLDSSE---VGHPPSKFQRVFDRARSEGFLTVAHAGEEGPPEYIWEALDLLKVER-IDHGVRAFED------ERL 230 (326)
T ss_dssp GCSEEEEESCC---TTCCGGGGHHHHHHHHHTTCEECEEESSSSCHHHHHHHHHTTCCSS-EEECGGGGGC------HHH
T ss_pred cceeeCCCCCC---CCCCHHHHHHHHHHHHHcCCceeeecCCCCCHHHHHHHHhcCCCce-eeeeeeeccc------HHH
Confidence 55566543221 2346788999999999999999999833222233333333344432 2444322111 345
Q ss_pred HHHHHhcCCCEEEEeCCCHH-------HHHHHHHHHHcCCCEEEecCCccccchhhhhhh
Q 020079 276 IRLAEFVNTPLYVVHVMSMD-------AMEEIAKARKAGPNFLNTTIPLCDSCSNIIRMV 328 (331)
Q Consensus 276 ~~l~~~~g~~~~i~H~~~~~-------~~~~i~~~~~~Gi~v~~~~~p~~~~~~~~~~~~ 328 (331)
++++++.++.+.+|+.|+.. ...+++++.++|++|+.+|.--..+..++...+
T Consensus 231 ~~~l~~~~i~le~cP~SN~~l~~~~~~~~hPi~~ll~~Gv~V~l~TDdp~~~~~~l~~e~ 290 (326)
T 3pao_A 231 MRRLIDEQIPLTVCPLSNTKLCVFDDMSQHTILDMLERGVKVTVNSDDPAYFGGYVTENF 290 (326)
T ss_dssp HHHHHHHTCCEEECHHHHHHTTSSSSGGGCCHHHHHHHTCCEEECCBSHHHHTCCHHHHH
T ss_pred HHHHHHcCCeEEECchhHHHhCCCCCcccChHHHHHHCCCeEEEeCCCcccCCCCHHHHH
Confidence 67788889887766654321 234789999999999987763222222454444
No 94
>2pgf_A Adenosine deaminase; metallo-dependent hydrolase, structural genomics, medical ST genomics of pathogenic protozoa consortium, MSGPP; HET: MSE ADN; 1.89A {Plasmodium vivax} PDB: 2pgr_A* 2qvn_A* 3ewc_A* 3ewd_A* 2amx_A
Probab=97.47 E-value=0.00023 Score=65.02 Aligned_cols=108 Identities=18% Similarity=0.033 Sum_probs=63.4
Q ss_pred HHHHHHHHHHHHHcCCcEEEEc-CCc-hhh-HHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHHHhcCCCEEEEe
Q 020079 214 DELLIEGFKRCKSLGALAMVHA-ENG-DAV-FEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVH 290 (331)
Q Consensus 214 ~~~l~~~~~~A~~~g~~v~~H~-e~~-~~~-~~~~~~~~~~G~~~~~~~~~~~~~~~e~~~i~~~~~l~~~~g~~~~i~H 290 (331)
++.++++++.|+++|+++++|+ |.. ... ....+.+...|.. .-.|+...... ++.++++++.|+.+.+|+
T Consensus 214 ~~~~~~~~~~A~~~gl~~~~HagE~~~~~~~~~i~~al~~lg~~-ri~Hgv~l~~~------~~l~~~l~~~~i~v~~cP 286 (371)
T 2pgf_A 214 LKEYKEIFDYVRESGVPLSVHAGEDVTLPNLNTLYSAIQVLKVE-RIGHGIRVAES------QELIDMVKEKNILLEVCP 286 (371)
T ss_dssp GGGGHHHHHHHHHTTCCBEEEESCCTTSSSSHHHHHHHHTSCCS-EEEECGGGGGC------HHHHHHHHHTTCEEEECH
T ss_pred HHHHHHHHHHHHHcCCcEEEeeCCCCCCCchHHHHHHHhccCCC-EEecchhcccc------HHHHHHHHHcCCeEEECc
Confidence 7789999999999999999997 441 112 2222333323433 22444332211 234677788787655444
Q ss_pred CCCHH-------HHHHHHHHHHcCCCEEEecCCccccchhhhhhh
Q 020079 291 VMSMD-------AMEEIAKARKAGPNFLNTTIPLCDSCSNIIRMV 328 (331)
Q Consensus 291 ~~~~~-------~~~~i~~~~~~Gi~v~~~~~p~~~~~~~~~~~~ 328 (331)
.|+.. ....++++.++|++|+.+|.--..+..++.+.|
T Consensus 287 ~SN~~l~~~~~~~~~pi~~ll~~Gv~V~lgTD~~~~~~~~l~~e~ 331 (371)
T 2pgf_A 287 ISNVLLKNAKSMDTHPIRQLYDAGVKVSVNSDDPGMFLTNINDDY 331 (371)
T ss_dssp HHHHHTTSSSCGGGCTHHHHHHTTCEEEECCBCHHHHTCCHHHHH
T ss_pred chhHHhCCCCccccChHHHHHHCCCeEEEeCCCCcccCCCHHHHH
Confidence 43211 123799999999999988772222223554444
No 95
>4do7_A Amidohydrolase 2; enzyme function initiative, EFI, structural TIM-barrel fold, putative lactonase; 1.70A {Burkholderia multivorans} PDB: 4dlm_A 4dnm_A* 4dlf_A
Probab=97.21 E-value=0.00082 Score=59.44 Aligned_cols=100 Identities=9% Similarity=0.038 Sum_probs=61.3
Q ss_pred hHHHHHHHHHHhCCCeEEEEEecCCC-C-cCCHHHHHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHHHcCCCCcccccc
Q 020079 184 VSDEMEVMVKEKGINSFKFFMAYKGS-F-MINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHAL 261 (331)
Q Consensus 184 ~~~~~~~~~~~~g~~~ik~~~~~~~~-~-~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~~~G~~~~~~~~~ 261 (331)
..++++++. ..|+.+++....+... . ...++.+...++.++++|+++.+|+....
T Consensus 90 ~~~~L~~l~-~~gv~Gir~~~~~~~~~~~~~~~~~~~~~~~~~~~~glpv~ih~~~~~---------------------- 146 (303)
T 4do7_A 90 LAERVAEWR-GTKLRGFRHQLQDEADVRAFVDDADFARGVAWLQANDYVYDVLVFERQ---------------------- 146 (303)
T ss_dssp HHHHHTTCC-SSCEEEEECCGGGSSCHHHHHHCHHHHHHHHHHHHTTCEEEECCCGGG----------------------
T ss_pred HHHHHHHHh-hcCceEEEecCcCCCCccccccCHHHHHHHHHHHHCCCeEEEecCHHH----------------------
Confidence 455666655 5677777754332211 1 23456788999999999999999975321
Q ss_pred cCChHHHHHHHHHHHHHHHhc-CCCEEEEeCCCHH---------H----HHHHHHHHHcCCCEEEecCCc
Q 020079 262 SRPPLLEGEATTRAIRLAEFV-NTPLYVVHVMSMD---------A----MEEIAKARKAGPNFLNTTIPL 317 (331)
Q Consensus 262 ~~~~~~e~~~i~~~~~l~~~~-g~~~~i~H~~~~~---------~----~~~i~~~~~~Gi~v~~~~~p~ 317 (331)
+.+..++++++ ++++.+.|+.... . .+.+..+.+ .-||+++++-.
T Consensus 147 ----------l~~l~~ll~~~P~l~iVi~H~G~p~~~~~~~~~~~~~~w~~~l~~la~-~~nv~~klSg~ 205 (303)
T 4do7_A 147 ----------LPDVQAFCARHDAHWLVLDHAGKPALAEFDRDDTALARWRAALRELAA-LPHVVCKLSGL 205 (303)
T ss_dssp ----------HHHHHHHHHHCCSSCEEEGGGGCCCGGGCC---CHHHHHHHHHHHHHT-STTEEEEECSC
T ss_pred ----------HHHHHHHHHHCCCCCEEEeCCCCCCccccccccchHHHHHHHHHHHHh-CCCEEEEeCCc
Confidence 11223555566 5899999986521 1 123444433 34899888743
No 96
>2f6k_A Metal-dependent hydrolase; metal dependent hydrolyse, aminohydro_2, ACMDS, ACMS, trypto metabolism, quinolinic acid, QUIN; 2.50A {Lactobacillus plantarum} SCOP: c.1.9.15
Probab=97.20 E-value=0.0008 Score=59.32 Aligned_cols=55 Identities=9% Similarity=0.168 Sum_probs=42.4
Q ss_pred hhhHHHHHHHHHHhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEcCC
Q 020079 182 EVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAEN 237 (331)
Q Consensus 182 ~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~ 237 (331)
++..++++++.++.|..++++...+.+ ...+++.+..+++.|+++|+++.+|+..
T Consensus 103 ~~~~~el~~~~~~~g~~gi~~~~~~~~-~~~~~~~~~~~~~~a~~~~lpv~iH~~~ 157 (307)
T 2f6k_A 103 LDAVKTVQQALDQDGALGVTVPTNSRG-LYFGSPVLERVYQELDARQAIVALHPNE 157 (307)
T ss_dssp HHHHHHHHHHHHTSCCSEEEEESEETT-EETTCGGGHHHHHHHHTTTCEEEEECCC
T ss_pred HHHHHHHHHHHhccCCcEEEEeccCCC-CCCCcHhHHHHHHHHHHcCCeEEECCCC
Confidence 456778888875579999987665433 2345678999999999999999999854
No 97
>3e2v_A 3'-5'-exonuclease; structural genomics, hydrolase, PSI-2, protein initiative, NEW YORK SGX research center for structural GEN nysgxrc; 1.50A {Saccharomyces cerevisiae}
Probab=97.10 E-value=0.0027 Score=58.04 Aligned_cols=42 Identities=10% Similarity=-0.130 Sum_probs=29.9
Q ss_pred cccccccccccCCCCC------CCChhhHHHHHHHHHhCCceEEecCc
Q 020079 105 PGGIDPHTHLAMEFMG------SETIDDFFSGQAAALAGGTTMHIDFV 146 (331)
Q Consensus 105 PG~ID~H~H~~~~~~~------~~~~~~~~~~~~~~l~~GvTtv~d~~ 146 (331)
+-|||+|+|+..+... ....+++......+...||+.++..+
T Consensus 12 ~~~iDih~nL~d~~f~g~y~~~~~h~~D~~~vl~rA~~~GV~~ii~~g 59 (401)
T 3e2v_A 12 LKYYDIGLNLTDPMFHGIYNGKQYHPADYVKLLERAAQRHVKNALVTG 59 (401)
T ss_dssp CCEEEEEECTTSGGGGTEETTEECSCCCHHHHHHHHHHTTEEEEEECC
T ss_pred CCeEEEEeCcCcHHHhhhccccccCccCHHHHHHHHHHCCCCEEEEec
Confidence 5699999999876221 12235666667888999999988554
No 98
>3iar_A Adenosine deaminase; purine metabolism structural genomics, structural genomics consortium, SGC, D mutation, hereditary hemolytic anemia, hydrolase; HET: 3D1; 1.52A {Homo sapiens} SCOP: c.1.9.1 PDB: 2bgn_E* 1w1i_E* 1qxl_A* 1krm_A* 1vfl_A 1ndv_A* 1ndy_A* 1ndz_A* 1o5r_A* 1uml_A* 1v79_A* 1v7a_A* 1ndw_A 1wxy_A* 1wxz_A* 2e1w_A* 2z7g_A* 2ada_A* 3mvi_A 1a4l_A* ...
Probab=97.02 E-value=0.011 Score=53.54 Aligned_cols=94 Identities=12% Similarity=0.015 Sum_probs=59.1
Q ss_pred HHHHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHHHhcCCCEEEEeCCCH
Q 020079 215 ELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSM 294 (331)
Q Consensus 215 ~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~e~~~i~~~~~l~~~~g~~~~i~H~~~~ 294 (331)
+.+..+++.|++.|+++++|+..........+.+...|.. .-+|+...... .+.++++++.++.+.+|..|+.
T Consensus 192 ~~f~~~f~~A~~~gl~~~~HagE~~~~~~i~~al~~lg~~-RIgHgv~l~~d------~~l~~~l~~~~i~le~cP~SN~ 264 (367)
T 3iar_A 192 PGHVQAYQEAVKSGIHRTVHAGEVGSAEVVKEAVDILKTE-RLGHGYHTLED------QALYNRLRQENMHFEICPWSSY 264 (367)
T ss_dssp HHHHHHHHHHHHHTCEEEEEESSSSCHHHHHHHHHTSCCS-EEEECGGGGGC------HHHHHHHHHTTCEEEECHHHHH
T ss_pred HHHHHHHHHHHHcCCeeEEecCCcCChHHHHHHHHccCCc-eeeeeeeecCC------HHHHHHHHhCCcEEEECHHHHH
Confidence 6889999999999999999983322223333333334432 22444322111 2356777787877666554431
Q ss_pred H-------HHHHHHHHHHcCCCEEEecC
Q 020079 295 D-------AMEEIAKARKAGPNFLNTTI 315 (331)
Q Consensus 295 ~-------~~~~i~~~~~~Gi~v~~~~~ 315 (331)
. ....++++.++|++|+.+|.
T Consensus 265 ~l~~~~~~~~hPi~~ll~~Gv~v~l~TD 292 (367)
T 3iar_A 265 LTGAWKPDTEHAVIRLKNDQANYSLNTD 292 (367)
T ss_dssp HTSSSCTTSCCHHHHHHHTTCCEEECCB
T ss_pred HhCCCCCcccChHHHHHHCCCEEEECCC
Confidence 1 12479999999999998776
No 99
>4gxw_A Adenosine deaminase; amidohydrolase, COG1816, EFI, structural genomics, hydrolase; 1.30A {Burkholderia ambifaria}
Probab=97.02 E-value=0.0082 Score=54.67 Aligned_cols=109 Identities=14% Similarity=-0.016 Sum_probs=66.4
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEcCCchh-hHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHHHhcCCCEEEEe
Q 020079 212 INDELLIEGFKRCKSLGALAMVHAENGDA-VFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVH 290 (331)
Q Consensus 212 ~~~~~l~~~~~~A~~~g~~v~~H~e~~~~-~~~~~~~~~~~G~~~~~~~~~~~~~~~e~~~i~~~~~l~~~~g~~~~i~H 290 (331)
.+.+.+..+++.|++.|+++.+|+..... .+...+.+...|.. +-+|+...... .+.++.+.+.++++.+|.
T Consensus 194 ~p~~~f~~~f~~ar~~Gl~~t~HAGE~~~p~~~i~~al~~lga~-RIgHG~~~~~d------~~L~~~l~~~~I~lEvCP 266 (380)
T 4gxw_A 194 RPPELFWKAYRDARAAGFRTTAHAGEFGMPWRNVETAVDLLHVD-RVDHGYTIVDN------PELCARYAERGIVFTVVP 266 (380)
T ss_dssp CCGGGGHHHHHHHHHTTCEEEEEESCTTCCHHHHHHHHHTSCCS-EEEECGGGGGC------HHHHHHHHHHTCEEEECT
T ss_pred CCHHHHHHHHHHHHHcCCCeeeeccccCCchHHHHHHHHHcCCc-ccccceeeccC------hHHHHHHHHhCceeEECC
Confidence 35677899999999999999999843221 12222333333432 22344321111 234566777899999998
Q ss_pred CCCH--------HHHH--HHHHHHHcCCCEEEecCCccccchhhhhh
Q 020079 291 VMSM--------DAME--EIAKARKAGPNFLNTTIPLCDSCSNIIRM 327 (331)
Q Consensus 291 ~~~~--------~~~~--~i~~~~~~Gi~v~~~~~p~~~~~~~~~~~ 327 (331)
.|+- ..++ +++.+.++|++|++.|.--..+.+++++.
T Consensus 267 ~SN~~l~~v~~~~~~~~HP~~~l~~~Gv~vtinTDDp~~f~t~Ls~E 313 (380)
T 4gxw_A 267 TNSYYLRTLPPDQWAERHPMRKMPGLGLKIHPNTDDPTLHKVNPSEA 313 (380)
T ss_dssp TCHHHHHHSCTTTHHHHCGGGGTGGGTCEEEECCBSHHHHTCCHHHH
T ss_pred cchhhhcccccccccccChHHHHHHCCCeEEECCCCchhhCCCHHHH
Confidence 8762 1123 58889999999998776444444444443
No 100
>3qy7_A Tyrosine-protein phosphatase YWQE; TIM barrel, polymerase and histindinol phosphatase(PHP)-like phosphatase, hydrolase; 1.62A {Bacillus subtilis} PDB: 3qy6_A
Probab=96.12 E-value=0.026 Score=48.62 Aligned_cols=37 Identities=27% Similarity=0.249 Sum_probs=27.5
Q ss_pred cccccccccCCC-CCCCChhhHHHHHHHHHhCCceEEe
Q 020079 107 GIDPHTHLAMEF-MGSETIDDFFSGQAAALAGGTTMHI 143 (331)
Q Consensus 107 ~ID~H~H~~~~~-~~~~~~~~~~~~~~~~l~~GvTtv~ 143 (331)
+||.|+|+..+. -|..+.++.....+.+.+.|++.+.
T Consensus 1 m~D~H~H~~~~~ddG~~~~~~sl~~~~~a~~~G~~~i~ 38 (262)
T 3qy7_A 1 MIDIHCHILPAMDDGAGDSADSIEMARAAVRQGIRTII 38 (262)
T ss_dssp CEESSBCCSTTSSSSCSSHHHHHHHHHHHHHTTCCEEE
T ss_pred CEEEeecCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEE
Confidence 589999996421 2445666655668889999999987
No 101
>3irs_A Uncharacterized protein BB4693; structural genomics, PSI-2, protein structure initiative, TI protein; HET: GOL; 1.76A {Bordetella bronchiseptica} PDB: 3k4w_A
Probab=96.01 E-value=0.025 Score=49.46 Aligned_cols=55 Identities=13% Similarity=0.191 Sum_probs=41.9
Q ss_pred hhhHHHHHHHHHHhCCCeEEEEEecC-CCCcCCHHHHHHHHHHHHHcCCcEEEEcCC
Q 020079 182 EVVSDEMEVMVKEKGINSFKFFMAYK-GSFMINDELLIEGFKRCKSLGALAMVHAEN 237 (331)
Q Consensus 182 ~~~~~~~~~~~~~~g~~~ik~~~~~~-~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~ 237 (331)
++..+++++ +.+.|..++++..... .....+++.+..+++.|.++|+++.+|+..
T Consensus 105 ~~a~~eL~~-~~~~g~~Gi~~~~~~~~~~~~~~d~~~~~~~~~a~e~glpv~iH~~~ 160 (291)
T 3irs_A 105 KEAMAQMQE-ILDLGIRIVNLEPGVWATPMHVDDRRLYPLYAFCEDNGIPVIMMTGG 160 (291)
T ss_dssp HHHHHHHHH-HHHTTCCCEEECGGGSSSCCCTTCGGGHHHHHHHHHTTCCEEEECSS
T ss_pred HHHHHHHHH-HHhCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHcCCeEEEeCCC
Confidence 455677888 5478999998864432 123456788999999999999999999854
No 102
>2wje_A CPS4B, tyrosine-protein phosphatase CPSB; capsule biogenesis/degradation, manganese, hydrolase, exopolysaccharide synthesis; 1.90A {Streptococcus pneumoniae} PDB: 2wjd_A 2wjf_A 3qy8_A
Probab=95.91 E-value=0.069 Score=45.42 Aligned_cols=39 Identities=21% Similarity=0.300 Sum_probs=29.1
Q ss_pred cccccccccccCCC-CCCCChhhHHHHHHHHHhCCceEEe
Q 020079 105 PGGIDPHTHLAMEF-MGSETIDDFFSGQAAALAGGTTMHI 143 (331)
Q Consensus 105 PG~ID~H~H~~~~~-~~~~~~~~~~~~~~~~l~~GvTtv~ 143 (331)
+|++|.|+|.-.+. .|..+.++.....+.+.+.|++.+.
T Consensus 3 ~~m~D~H~Ht~~~~ddg~~~~e~~~e~i~~A~~~Gi~~i~ 42 (247)
T 2wje_A 3 MGMIDIHSHIVFDVDDGPKSREESKALLAESYRQGVRTIV 42 (247)
T ss_dssp -CEEECCBCCSTTSSSSCSSHHHHHHHHHHHHHTTEEEEE
T ss_pred CCCEEEecccCCCCCCCCCCHHHHHHHHHHHHHCCCCEEE
Confidence 46899999995432 2455667666778899999999887
No 103
>2wm1_A 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; neurological disorders, metal-dependent amidohydrolase, kynurenine pathway; HET: 13P; 2.01A {Homo sapiens}
Probab=95.64 E-value=0.039 Score=49.15 Aligned_cols=55 Identities=24% Similarity=0.278 Sum_probs=42.7
Q ss_pred hhhHHHHHHHHHHhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEcCC
Q 020079 182 EVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAEN 237 (331)
Q Consensus 182 ~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~ 237 (331)
+...++++++.++.|..++++.....+ ...+++.+..+++.|.++|+++.+|+..
T Consensus 123 ~~a~~el~~~~~~~g~~Gv~l~~~~~~-~~l~d~~~~~~~~~~~e~~lpv~iH~~~ 177 (336)
T 2wm1_A 123 ELAVKEMERCVKELGFPGVQIGTHVNE-WDLNAQELFPVYAAAERLKCSLFVHPWD 177 (336)
T ss_dssp HHHHHHHHHHHHTSCCSEEEEESEETT-EETTCGGGHHHHHHHHHHTCEEEEECCS
T ss_pred HHHHHHHHHHHHccCCeEEEECCcCCC-CCCCCccHHHHHHHHHHcCCEEEECCCC
Confidence 356778888885579999987654433 3456788999999999999999999853
No 104
>2hbv_A 2-amino-3-carboxymuconate 6-semialdehyde decarbox; ACMSD, TIM-barrel, decarboxylase, metaloenzyme, lyase; 1.65A {Pseudomonas fluorescens} SCOP: c.1.9.15 PDB: 2hbx_A
Probab=95.46 E-value=0.069 Score=47.49 Aligned_cols=54 Identities=15% Similarity=0.134 Sum_probs=42.8
Q ss_pred hhhHHHHHHHHHHhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEcCC
Q 020079 182 EVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAEN 237 (331)
Q Consensus 182 ~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~ 237 (331)
+...++++++. +.|..++++.....+ ...+++.+..+++.|.++|+++.+|+..
T Consensus 127 ~~a~~el~~~~-~~g~~Gv~l~~~~~~-~~l~d~~~~p~~~~~~e~~lpv~iH~~~ 180 (334)
T 2hbv_A 127 DLACKEASRAV-AAGHLGIQIGNHLGD-KDLDDATLEAFLTHCANEDIPILVHPWD 180 (334)
T ss_dssp HHHHHHHHHHH-HHTCCCEEEESCBTT-BCTTSHHHHHHHHHHHHTTCCEEEECCS
T ss_pred HHHHHHHHHHH-HcCCeEEEECCCCCC-CCCCcHHHHHHHHHHHHCCCEEEECCCC
Confidence 35678888888 789999887654433 3457789999999999999999999854
No 105
>2yxo_A Histidinol phosphatase; metal-dependent, hydrolase; 1.60A {Thermus thermophilus} PDB: 2yz5_A 2z4g_A
Probab=95.23 E-value=0.82 Score=38.84 Aligned_cols=52 Identities=15% Similarity=-0.015 Sum_probs=34.7
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCH-------HHHHHHHHHHHcCCCEEEecCCccccchh
Q 020079 272 TTRAIRLAEFVNTPLYVVHVMSM-------DAMEEIAKARKAGPNFLNTTIPLCDSCSN 323 (331)
Q Consensus 272 i~~~~~l~~~~g~~~~i~H~~~~-------~~~~~i~~~~~~Gi~v~~~~~p~~~~~~~ 323 (331)
+.+.++.+.+.|..+.+.+.+.. .....++.+++.|++++++..-|+..-.+
T Consensus 174 ~~~~l~~~~~~g~~iEvn~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~gSDaH~~~~~~ 232 (267)
T 2yxo_A 174 AEPALRAVAEAGLFLDVNTAGLRRPAKEVYPAPALLRRARELGIGLVLGSDAHRPEEVG 232 (267)
T ss_dssp HHHHHHHHHHHTCEEEEEGGGGGSTTCSCBSCHHHHHHHHHHTCCEEEECCBSSGGGTT
T ss_pred HHHHHHHHHHcCCEEEEEchHhcCCCCCCCCCHHHHHHHHHcCCCEEEecCCCCHHHHH
Confidence 34455666667777777664321 12467888889999998888887765443
No 106
>3ij6_A Uncharacterized metal-dependent hydrolase; structural genomics, amidohydrolase, PSI-2, protein structure initiative; 2.00A {Lactobacillus acidophilus}
Probab=94.87 E-value=0.022 Score=50.47 Aligned_cols=55 Identities=13% Similarity=0.125 Sum_probs=42.7
Q ss_pred hhhHHHHHHHHHHhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEcCC
Q 020079 182 EVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAEN 237 (331)
Q Consensus 182 ~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~ 237 (331)
+...++++++.++.|..++++.....+ ...+++.+..+++.+.++|+++.+|...
T Consensus 110 ~~a~~el~r~~~~~G~~Gv~l~~~~~~-~~l~d~~~~p~~~~~~e~g~pv~iH~g~ 164 (312)
T 3ij6_A 110 ESACKVISSIKDDENLVGAQIFTRHLG-KSIADKEFRPVLAQAAKLHVPLWMHPVF 164 (312)
T ss_dssp HHHHHHHHHHHHCTTEEEEEEESEETT-EETTSTTTHHHHHHHHHTTCCEEEECCC
T ss_pred HHHHHHHHHHHHhCCCceEeccCCCCC-CCCCCccHHHHHHHHHHcCCeEEEcCCC
Confidence 456788888875578888887654433 3456788999999999999999999743
No 107
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=94.43 E-value=0.25 Score=42.01 Aligned_cols=96 Identities=10% Similarity=0.045 Sum_probs=53.0
Q ss_pred HhCCCeEEEEEecC------C---CCcCCHHHHHHHHHHHHHcCCcEEEEc-CCchhhHHHHHHHHHcCCCCcccccccC
Q 020079 194 EKGINSFKFFMAYK------G---SFMINDELLIEGFKRCKSLGALAMVHA-ENGDAVFEGQKRMIELGITGPEGHALSR 263 (331)
Q Consensus 194 ~~g~~~ik~~~~~~------~---~~~~~~~~l~~~~~~A~~~g~~v~~H~-e~~~~~~~~~~~~~~~G~~~~~~~~~~~ 263 (331)
+.|.+.+.++.... + ....+++.++++.+.++++|+.+..|. .....
T Consensus 33 ~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~----------------------- 89 (262)
T 3p6l_A 33 ELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAASKGIKIVGTGVYVAEK----------------------- 89 (262)
T ss_dssp HTTCCEEEECTTEECCGGGTTCEESTTCCHHHHHHHHHHHHHTTCEEEEEEEECCSS-----------------------
T ss_pred HcCCCEEeecCCcccccccccccccccCCHHHHHHHHHHHHHcCCeEEEEeccCCcc-----------------------
Confidence 67888776653210 0 223467777888888888888877663 21100
Q ss_pred ChHHHHHHHHHHHHHHHhcCCCEEEEeCCCHHHHHHHHHHHHcCCCEEEecCCc
Q 020079 264 PPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGPNFLNTTIPL 317 (331)
Q Consensus 264 ~~~~e~~~i~~~~~l~~~~g~~~~i~H~~~~~~~~~i~~~~~~Gi~v~~~~~p~ 317 (331)
...+++.++++...|++..+.|.....--+..+.+++.|+.+..+..|.
T Consensus 90 -----~~~~~~~i~~A~~lGa~~v~~~~~~~~~~~l~~~a~~~gv~l~~En~~~ 138 (262)
T 3p6l_A 90 -----SSDWEKMFKFAKAMDLEFITCEPALSDWDLVEKLSKQYNIKISVHNHPQ 138 (262)
T ss_dssp -----TTHHHHHHHHHHHTTCSEEEECCCGGGHHHHHHHHHHHTCEEEEECCSS
T ss_pred -----HHHHHHHHHHHHHcCCCEEEecCCHHHHHHHHHHHHHhCCEEEEEeCCC
Confidence 1224445566666666666666432211233444556666666665554
No 108
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=94.36 E-value=0.35 Score=40.98 Aligned_cols=40 Identities=10% Similarity=0.001 Sum_probs=24.7
Q ss_pred HhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEE
Q 020079 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVH 234 (331)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H 234 (331)
+.|.+++.++.. +-+...+++.++++.+.++++|+.+..+
T Consensus 41 ~~G~~~vEl~~~-~~~~~~~~~~~~~~~~~l~~~gl~i~~~ 80 (257)
T 3lmz_A 41 RLDIHYLCIKDF-HLPLNSTDEQIRAFHDKCAAHKVTGYAV 80 (257)
T ss_dssp HTTCCEEEECTT-TSCTTCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HhCCCEEEEecc-cCCCCCCHHHHHHHHHHHHHcCCeEEEE
Confidence 667777765432 1122345667777777777777776655
No 109
>3aam_A Endonuclease IV, endoiv; DNA repair, base excision repair, BER, TIM barrel, endonucle hydrolase, structural genomics, NPPSFA; 1.58A {Thermus thermophilus}
Probab=94.04 E-value=1.5 Score=37.15 Aligned_cols=108 Identities=14% Similarity=0.101 Sum_probs=62.3
Q ss_pred HHHHHhCCCeEEEEEecCC---CCcCCHHHHHHHHHHHHHcCC-cEEEEcCCchhhHHHHHHHHHcCCCCcccccccCCh
Q 020079 190 VMVKEKGINSFKFFMAYKG---SFMINDELLIEGFKRCKSLGA-LAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPP 265 (331)
Q Consensus 190 ~~~~~~g~~~ik~~~~~~~---~~~~~~~~l~~~~~~A~~~g~-~v~~H~e~~~~~~~~~~~~~~~G~~~~~~~~~~~~~ 265 (331)
+.+.+.|.+.+.++..... ....+++.++++.+.++++|+ .+.+|..-.-. +.. .+.
T Consensus 21 ~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~h~~~~~~------------l~s-------~~~ 81 (270)
T 3aam_A 21 EEATALGLTAFQIFAKSPRSWRPRALSPAEVEAFRALREASGGLPAVIHASYLVN------------LGA-------EGE 81 (270)
T ss_dssp HHHHHHTCSCEEEESSCTTCCSCCCCCHHHHHHHHHHHHHTTCCCEEEECCTTCC------------TTC-------SST
T ss_pred HHHHHcCCCEEEEeCCCCCcCcCCCCCHHHHHHHHHHHHHcCCceEEEecCcccC------------CCC-------CHH
Confidence 3333678888877543211 123457788888888999998 88888521000 000 000
Q ss_pred --HHHHHHHHHHHHHHHhcCCCEEEEeCCC---H---HHHHH-HHHHH-HcCCCEEEecCC
Q 020079 266 --LLEGEATTRAIRLAEFVNTPLYVVHVMS---M---DAMEE-IAKAR-KAGPNFLNTTIP 316 (331)
Q Consensus 266 --~~e~~~i~~~~~l~~~~g~~~~i~H~~~---~---~~~~~-i~~~~-~~Gi~v~~~~~p 316 (331)
......+.+.++++...|++..+.|... . +.+.. .+.++ +.|+.+..+..|
T Consensus 82 ~r~~~~~~~~~~i~~a~~lGa~~vv~h~g~~~~~~~~~~l~~l~~~a~~~~gv~l~lEn~~ 142 (270)
T 3aam_A 82 LWEKSVASLADDLEKAALLGVEYVVVHPGSGRPERVKEGALKALRLAGVRSRPVLLVENTA 142 (270)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCEEEECCCBSCHHHHHHHHHHHHHHHTCCSSSEEEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEEEECCCCCCHHHHHHHHHHHHHhhcccCCCEEEEecCC
Confidence 1113456677788888888877777543 1 22222 23333 568888887765
No 110
>3nur_A Amidohydrolase; TIM barrel; 1.75A {Staphylococcus aureus}
Probab=94.02 E-value=0.27 Score=44.23 Aligned_cols=56 Identities=14% Similarity=0.163 Sum_probs=43.8
Q ss_pred hhhHHHHHHHHHHhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEcCCc
Q 020079 182 EVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENG 238 (331)
Q Consensus 182 ~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~ 238 (331)
+...+++++++++.|..++++...+. ....+++.+..+++.+.++|++|.+|....
T Consensus 141 ~~a~~El~r~~~~~G~~Gv~l~~~~~-~~~~~d~~~~p~~~~~~e~g~pV~iH~g~~ 196 (357)
T 3nur_A 141 EAAAREFERCINDLGFKGALIMGRAQ-DGFLDQDKYDIIFKTAENLDVPIYLHPAPV 196 (357)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEESCBT-TBCTTSGGGHHHHHHHHHHTCCEEEECCCC
T ss_pred HHHHHHHHHHHhhcCceEEEeCCCCC-CCCCCCccHHHHHHHHHhcCCeEEEecCCC
Confidence 45678888877568999999874333 234567889999999999999999998653
No 111
>1m65_A Hypothetical protein YCDX; structural genomics, beta-alpha-barrel, metallo-enzyme, STRU function project, S2F, unknown function; 1.57A {Escherichia coli} SCOP: c.6.3.1 PDB: 1m68_A 1pb0_A
Probab=92.59 E-value=0.46 Score=39.90 Aligned_cols=34 Identities=24% Similarity=0.313 Sum_probs=24.3
Q ss_pred cccccccccCCCCCCCChhhHHHHHHHHHhCCceEEe
Q 020079 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHI 143 (331)
Q Consensus 107 ~ID~H~H~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~ 143 (331)
++|.|+|...+..+..+++++ .+.+.+.|++.+.
T Consensus 3 ~~DlH~Ht~~Sd~g~~~~~e~---v~~A~~~Gl~~ia 36 (245)
T 1m65_A 3 PVDLHMHTVASTHAYSTLSDY---IAQAKQKGIKLFA 36 (245)
T ss_dssp CEECCBCCTTSTTCCCCHHHH---HHHHHHHTCCEEE
T ss_pred ceEeCcCCCCCCCCCCcHHHH---HHHHHHCCCCEEE
Confidence 689999997663333355544 7778889998765
No 112
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=90.24 E-value=5 Score=34.20 Aligned_cols=40 Identities=10% Similarity=0.058 Sum_probs=31.4
Q ss_pred HhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEc
Q 020079 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA 235 (331)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~ 235 (331)
+.|.+++.+.... ....+++.++++.+.++++|+.+..+.
T Consensus 32 ~~G~~~vEl~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~ 71 (290)
T 3tva_A 32 DLKVPTVQVHAPH--PHTRTREHAQAFRAKCDAAGIQVTVIF 71 (290)
T ss_dssp HTTCSEEEEECCC--GGGCSHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HcCCCEEEecCCC--CCcCCHHHHHHHHHHHHHcCCEEEEEe
Confidence 7899999876532 123578889999999999999998873
No 113
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=89.96 E-value=2.1 Score=37.02 Aligned_cols=119 Identities=14% Similarity=0.124 Sum_probs=70.5
Q ss_pred hhhHHHHHHHHHHhCCCeEEEEEec---CCCCcCCHHHHHHHHHHHHH----cCCcEEEEcCCchhhHHHHHHHHHcCCC
Q 020079 182 EVVSDEMEVMVKEKGINSFKFFMAY---KGSFMINDELLIEGFKRCKS----LGALAMVHAENGDAVFEGQKRMIELGIT 254 (331)
Q Consensus 182 ~~~~~~~~~~~~~~g~~~ik~~~~~---~~~~~~~~~~l~~~~~~A~~----~g~~v~~H~e~~~~~~~~~~~~~~~G~~ 254 (331)
+...+..+++. +.|++.|.+.... ...+...+++++++....+. .++|+.++..+.+..+... +.|..
T Consensus 38 ~~a~~~a~~~v-~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~~~piSIDT~~~~va~aAl----~aGa~ 112 (282)
T 1aj0_A 38 IDAVKHANLMI-NAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRFEVWISVDTSKPEVIRESA----KVGAH 112 (282)
T ss_dssp HHHHHHHHHHH-HHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHH----HTTCC
T ss_pred HHHHHHHHHHH-HCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhcCCeEEEeCCCHHHHHHHH----HcCCC
Confidence 34455556666 6899999876522 11122225666555444433 3999999988777665543 33543
Q ss_pred CcccccccCChHHHHHHHHHHHHHHHhcCCCEEEEeCC---C----------------HHHHHHHHHHHHcCCC---EEE
Q 020079 255 GPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVM---S----------------MDAMEEIAKARKAGPN---FLN 312 (331)
Q Consensus 255 ~~~~~~~~~~~~~e~~~i~~~~~l~~~~g~~~~i~H~~---~----------------~~~~~~i~~~~~~Gi~---v~~ 312 (331)
--..... ....+.+.+++++|+++.+.|.. . ..-.+.+++++++|++ |..
T Consensus 113 iINdvsg--------~~d~~~~~~~a~~~~~vVlmh~~G~p~tm~~~~~y~d~~~ev~~~l~~~i~~a~~~Gi~~~~Iil 184 (282)
T 1aj0_A 113 IINDIRS--------LSEPGALEAAAETGLPVCLMHMQGNPKTMQEAPKYDDVFAEVNRYFIEQIARCEQAGIAKEKLLL 184 (282)
T ss_dssp EEEETTT--------TCSTTHHHHHHHHTCCEEEECCSSCTTCCSCCCCCSCHHHHHHHHHHHHHHHHHHTTCCGGGEEE
T ss_pred EEEECCC--------CCCHHHHHHHHHhCCeEEEEccCCCCccccccCccchHHHHHHHHHHHHHHHHHHcCCChhhEEE
Confidence 2111110 01223456788899999999963 1 1123467778899997 887
Q ss_pred e
Q 020079 313 T 313 (331)
Q Consensus 313 ~ 313 (331)
|
T Consensus 185 D 185 (282)
T 1aj0_A 185 D 185 (282)
T ss_dssp E
T ss_pred e
Confidence 7
No 114
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=89.56 E-value=3.6 Score=34.59 Aligned_cols=21 Identities=24% Similarity=0.029 Sum_probs=13.4
Q ss_pred HHHHHHHHHHHhcCCCEEEEe
Q 020079 270 EATTRAIRLAEFVNTPLYVVH 290 (331)
Q Consensus 270 ~~i~~~~~l~~~~g~~~~i~H 290 (331)
..+.+..+++++.|+++.+..
T Consensus 120 ~~l~~l~~~a~~~gv~l~~E~ 140 (272)
T 2q02_A 120 EAIKRLSDLFARYDIQGLVEP 140 (272)
T ss_dssp HHHHHHHHHHHTTTCEEEECC
T ss_pred HHHHHHHHHHHHcCCEEEEEe
Confidence 445666677777777765543
No 115
>2w9m_A Polymerase X; SAXS, DNA repair, DNA polymerase, DNA replication; 2.46A {Deinococcus radiodurans}
Probab=89.26 E-value=2.6 Score=40.43 Aligned_cols=49 Identities=12% Similarity=-0.059 Sum_probs=30.5
Q ss_pred HHHHHHHhcCCCEEEEeCCC--HHHHHHHHHHHHcCCCEEEecCCccccchh
Q 020079 274 RAIRLAEFVNTPLYVVHVMS--MDAMEEIAKARKAGPNFLNTTIPLCDSCSN 323 (331)
Q Consensus 274 ~~~~l~~~~g~~~~i~H~~~--~~~~~~i~~~~~~Gi~v~~~~~p~~~~~~~ 323 (331)
+.++.+.+.|+-+.+...+. ......++.+++ |+++++++..|+....+
T Consensus 474 ~il~~~~e~g~~lEIN~~~~r~~~~~~~~~~a~e-Gl~i~igSDAH~~~~~~ 524 (578)
T 2w9m_A 474 AVLGACEANGTVVEINANAARLDLDWREALRWRE-RLKFAINTDAHVPGGLR 524 (578)
T ss_dssp HHHHHHHHHTCEEEEECSTTTCBSCHHHHHHHTT-TCCEEEECCCSSGGGGG
T ss_pred HHHHHHHHCCCEEEEECCCCCcCcHHHHHHHHHc-CCEEEEECCCCChhhcc
Confidence 34455556677666665442 123356777888 88888888877765443
No 116
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=88.77 E-value=6.8 Score=33.69 Aligned_cols=121 Identities=12% Similarity=0.024 Sum_probs=67.9
Q ss_pred hhhHHHHHHHHHHhCCCeEEEEEec---CCCCcCCHHHHHHHHHHHHHc---CCcEEEEcCCchhhHHHHHHHHHcCCCC
Q 020079 182 EVVSDEMEVMVKEKGINSFKFFMAY---KGSFMINDELLIEGFKRCKSL---GALAMVHAENGDAVFEGQKRMIELGITG 255 (331)
Q Consensus 182 ~~~~~~~~~~~~~~g~~~ik~~~~~---~~~~~~~~~~l~~~~~~A~~~---g~~v~~H~e~~~~~~~~~~~~~~~G~~~ 255 (331)
+...+..+++. +.|++.|.+.... .......++++++++...+.. ++++.+...+.+..+... +.|..-
T Consensus 29 ~~a~~~a~~~v-~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi~~l~~~~~piSIDT~~~~va~aAl----~aGa~i 103 (280)
T 1eye_A 29 DDAVKHGLAMA-AAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQGITVSIDTMRADVARAAL----QNGAQM 103 (280)
T ss_dssp HHHHHHHHHHH-HTTCSEEEEECC--------------HHHHHHHHHHHHHTTCCEEEECSCHHHHHHHH----HTTCCE
T ss_pred HHHHHHHHHHH-HCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHHHHhhcCCCEEEEeCCCHHHHHHHH----HcCCCE
Confidence 44556666666 7899999876422 112223356666655544443 999999988776665443 345422
Q ss_pred cccccccCChHHHHHHHHHHHHHHHhcCCCEEEEeCC-----------C--------HH-HHHHHHHHHHcCCC---EEE
Q 020079 256 PEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVM-----------S--------MD-AMEEIAKARKAGPN---FLN 312 (331)
Q Consensus 256 ~~~~~~~~~~~~e~~~i~~~~~l~~~~g~~~~i~H~~-----------~--------~~-~~~~i~~~~~~Gi~---v~~ 312 (331)
-...... ....+.+.+++++|+++.+.|.. . .. -.+.++++.++|++ |..
T Consensus 104 INdvsg~-------~~d~~m~~~~a~~~~~vVlmh~~G~p~tm~~~~~~y~dv~~~v~~~l~~~i~~a~~~Gi~~~~Iil 176 (280)
T 1eye_A 104 VNDVSGG-------RADPAMGPLLAEADVPWVLMHWRAVSADTPHVPVRYGNVVAEVRADLLASVADAVAAGVDPARLVL 176 (280)
T ss_dssp EEETTTT-------SSCTTHHHHHHHHTCCEEEECCCCSCTTCTTSCCCCSSHHHHHHHHHHHHHHHHHHTTCCGGGEEE
T ss_pred EEECCCC-------CCCHHHHHHHHHhCCeEEEEcCCCCCcchhhcCcchhHHHHHHHHHHHHHHHHHHHcCCChhhEEE
Confidence 1111100 00123567788999999999972 0 11 12467778899996 887
Q ss_pred ec
Q 020079 313 TT 314 (331)
Q Consensus 313 ~~ 314 (331)
|.
T Consensus 177 DP 178 (280)
T 1eye_A 177 DP 178 (280)
T ss_dssp EC
T ss_pred EC
Confidence 64
No 117
>3lgd_A Adenosine deaminase CECR1; TIM barrel, dimerization and receptor binding domains, glyco hydrolase, growth factor, secreted; HET: NAG; 2.00A {Homo sapiens} PDB: 3lgg_A*
Probab=87.90 E-value=0.71 Score=43.45 Aligned_cols=95 Identities=13% Similarity=0.027 Sum_probs=59.5
Q ss_pred CHHHHHHHHHH--HHHcCCcEEEEc-CCch-h---hHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHHHhcCCC
Q 020079 213 NDELLIEGFKR--CKSLGALAMVHA-ENGD-A---VFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTP 285 (331)
Q Consensus 213 ~~~~l~~~~~~--A~~~g~~v~~H~-e~~~-~---~~~~~~~~~~~G~~~~~~~~~~~~~~~e~~~i~~~~~l~~~~g~~ 285 (331)
+.+.+..+++. |++.|+++.+|+ |... . .+...+.+ ..|... -+|+...... .++++++.+.++.
T Consensus 307 p~~~f~~~f~~~~A~~~gl~~t~HAGE~~~~g~~~~~~i~~Al-~Lga~R-IgHGv~l~~d------p~l~~~l~~~~I~ 378 (508)
T 3lgd_A 307 SLHDYKEALMIPAKDGVKLPYFFHAGETDWQGTSIDRNILDAL-MLNTTR-IGHGFALSKH------PAVRTYSWKKDIP 378 (508)
T ss_dssp CTGGGHHHHTHHHHTTCCCCBCCEECCSSCCSSTTTTHHHHHH-HTTCSS-EEECTTGGGC------HHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHHHHHHcCCceeeecccccCCCCCcHHHHHHHH-hcCCce-eeeeEecCcc------HHHHHHHHhcCCe
Confidence 45678888888 889999999997 5421 1 22233333 344322 2444332211 2456777888888
Q ss_pred EEEEeCCCH-----H--HHHHHHHHHHcCCCEEEecC
Q 020079 286 LYVVHVMSM-----D--AMEEIAKARKAGPNFLNTTI 315 (331)
Q Consensus 286 ~~i~H~~~~-----~--~~~~i~~~~~~Gi~v~~~~~ 315 (331)
+.+|..|+. . ...+++.+.++|++|+.+|.
T Consensus 379 levCP~SN~~l~~v~~~~~hP~~~ll~~Gv~V~l~TD 415 (508)
T 3lgd_A 379 IEVCPISNQVLKLVSDLRNHPVATLMATGHPMVISSD 415 (508)
T ss_dssp EEECHHHHHHTTSCSSGGGCTHHHHHHTTCCEEECCB
T ss_pred EEECcchHHHhCCCCCcccChHHHHHHCCCcEEEcCC
Confidence 877776542 1 12478899999999998765
No 118
>2gwg_A 4-oxalomesaconate hydratase; TIM-barrel like protein, structural genomics, PSI, protein S initiative; 1.80A {Rhodopseudomonas palustris} SCOP: c.1.9.15
Probab=87.50 E-value=1.7 Score=38.53 Aligned_cols=57 Identities=23% Similarity=0.275 Sum_probs=42.6
Q ss_pred hhhHHHHHHHHHHhCCCeEEEEEecCC----CCcCCHHHHHHHHHHHHHcCCcEEEEcCCc
Q 020079 182 EVVSDEMEVMVKEKGINSFKFFMAYKG----SFMINDELLIEGFKRCKSLGALAMVHAENG 238 (331)
Q Consensus 182 ~~~~~~~~~~~~~~g~~~ik~~~~~~~----~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~ 238 (331)
+...++++++.++.|..++++.....+ ....+++.+..+++.|.++|+++.+|+...
T Consensus 122 ~~a~~eL~r~~~~~g~~Gv~l~~~~~~~~~~~~~l~d~~~~p~~~~a~e~~lpv~iH~~~~ 182 (350)
T 2gwg_A 122 KTCIPELEKCVKEYGFVAINLNPDPSGGHWTSPPLTDRIWYPIYEKMVELEIPAMIHVSTS 182 (350)
T ss_dssp GGGHHHHHHHHHTSCCCEEEECSCTTSSCCCSCCTTSGGGHHHHHHHHHHTCCEEECCCC-
T ss_pred HHHHHHHHHHHhccCCeEEEECCCCCCccCCCCCCCCHHHHHHHHHHHHcCCeEEECCCCC
Confidence 456788888886679999976443222 123567889999999999999999998543
No 119
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=87.10 E-value=11 Score=32.06 Aligned_cols=45 Identities=16% Similarity=0.032 Sum_probs=33.3
Q ss_pred HHHHHHhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEE-Ec
Q 020079 189 EVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMV-HA 235 (331)
Q Consensus 189 ~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~-H~ 235 (331)
.+.+.+.|.+++.+.... ....+++.++++.+.++++|+.+.. |.
T Consensus 23 l~~~~~~G~~~vEl~~~~--~~~~~~~~~~~~~~~l~~~gl~i~~~~~ 68 (294)
T 3vni_A 23 IEKVAKLGFDILEIAASP--LPFYSDIQINELKACAHGNGITLTVGHG 68 (294)
T ss_dssp HHHHHHHTCSEEEEESTT--GGGCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHcCCCEEEecCcc--cCCcCHHHHHHHHHHHHHcCCeEEEeec
Confidence 333447899999876431 2235788999999999999999988 54
No 120
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=86.30 E-value=12 Score=32.54 Aligned_cols=120 Identities=11% Similarity=0.082 Sum_probs=69.5
Q ss_pred hhHHHHHHHHHHhCCCeEEEEEec---CCCCcCCHHHHHHHH---HHHHH-cCCcEEEEcCCchhhHHHHHHHHHcCCCC
Q 020079 183 VVSDEMEVMVKEKGINSFKFFMAY---KGSFMINDELLIEGF---KRCKS-LGALAMVHAENGDAVFEGQKRMIELGITG 255 (331)
Q Consensus 183 ~~~~~~~~~~~~~g~~~ik~~~~~---~~~~~~~~~~l~~~~---~~A~~-~g~~v~~H~e~~~~~~~~~~~~~~~G~~~ 255 (331)
...+..+++. +.|++.|.+.... .......+|++++++ +..++ .++|+.+...+.+..+...+. |..-
T Consensus 64 ~a~~~a~~~v-~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~~vpiSIDT~~~~V~~aAl~a----Ga~i 138 (297)
T 1tx2_A 64 AAVRHAKEMR-DEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEVKLPISIDTYKAEVAKQAIEA----GAHI 138 (297)
T ss_dssp HHHHHHHHHH-HTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHSCSCEEEECSCHHHHHHHHHH----TCCE
T ss_pred HHHHHHHHHH-HcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcCCceEEEeCCCHHHHHHHHHc----CCCE
Confidence 3444555555 6899998875422 112222366776655 54444 499999998777666554432 4322
Q ss_pred cccccccCChHHHHHHHHHHHHHHHhcCCCEEEEeCC---C---------HHHHHHHHHHHHcCCC---EEEec
Q 020079 256 PEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVM---S---------MDAMEEIAKARKAGPN---FLNTT 314 (331)
Q Consensus 256 ~~~~~~~~~~~~e~~~i~~~~~l~~~~g~~~~i~H~~---~---------~~~~~~i~~~~~~Gi~---v~~~~ 314 (331)
-...... ...++.+.+++++|+++.+.|.. . ..-.+.++.+++.|++ |..|.
T Consensus 139 INdvsg~-------~~d~~m~~~aa~~g~~vVlmh~~G~p~y~d~v~ev~~~l~~~i~~a~~~GI~~~~IilDP 205 (297)
T 1tx2_A 139 INDIWGA-------KAEPKIAEVAAHYDVPIILMHNRDNMNYRNLMADMIADLYDSIKIAKDAGVRDENIILDP 205 (297)
T ss_dssp EEETTTT-------SSCTHHHHHHHHHTCCEEEECCCSCCCCSSHHHHHHHHHHHHHHHHHHTTCCGGGEEEEC
T ss_pred EEECCCC-------CCCHHHHHHHHHhCCcEEEEeCCCCCCcchHHHHHHHHHHHHHHHHHHcCCChhcEEEeC
Confidence 1111000 00124456788889999999963 1 1223467778899997 88773
No 121
>3dcp_A Histidinol-phosphatase; HISK, histidine biosynthesis, NESG, LMR141, structural genomics, PSI-2, protein structure initiative; 2.10A {Listeria monocytogenes str}
Probab=85.96 E-value=16 Score=31.37 Aligned_cols=54 Identities=9% Similarity=-0.095 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHhcCCCEEEEeCCCH--------HHHHHHHHHHHcCCCEEEecCCccccchh
Q 020079 270 EATTRAIRLAEFVNTPLYVVHVMSM--------DAMEEIAKARKAGPNFLNTTIPLCDSCSN 323 (331)
Q Consensus 270 ~~i~~~~~l~~~~g~~~~i~H~~~~--------~~~~~i~~~~~~Gi~v~~~~~p~~~~~~~ 323 (331)
..+++.++.+.+.|+.+.+.-.+.. ...+.++++++.|++++++...|.-.-++
T Consensus 205 ~~~~~il~~~~~~g~~lEiN~~~l~~~~~~~~yp~~~~~~~~~~~g~~i~igSDAH~~~~vg 266 (283)
T 3dcp_A 205 EKFRVILALVKKRDYELDFNTAGLFKPLCGETYPPKKIVTLASELQIPFVYGSDSHGVQDIG 266 (283)
T ss_dssp HHHHHHHHHHHHHTCEEEEECGGGGSTTCCSCBSCHHHHHHHHHTTCCEEEECCBSSGGGTT
T ss_pred HHHHHHHHHHHHcCCEEEEechHhcCCCCCCcCCHHHHHHHHHHcCCCEEEEcCCCCHHHHh
Confidence 4578888999999998887764321 12478999999999999998888765543
No 122
>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} SCOP: c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A*
Probab=85.89 E-value=8.4 Score=32.51 Aligned_cols=110 Identities=15% Similarity=0.088 Sum_probs=60.9
Q ss_pred HHHHHhCCCeEEEEEecCCC---CcCCHHHHHHHHHHHHHcCCc---EEEEcCCchhhHHHHHHHHHcCCCCcccccccC
Q 020079 190 VMVKEKGINSFKFFMAYKGS---FMINDELLIEGFKRCKSLGAL---AMVHAENGDAVFEGQKRMIELGITGPEGHALSR 263 (331)
Q Consensus 190 ~~~~~~g~~~ik~~~~~~~~---~~~~~~~l~~~~~~A~~~g~~---v~~H~e~~~~~~~~~~~~~~~G~~~~~~~~~~~ 263 (331)
+.+.+.|.+++.++...... ...+.+.++++.+.++++|+. +.+|..-.-. +.. ..
T Consensus 19 ~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~------------l~~------~~ 80 (285)
T 1qtw_A 19 IRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSYLIN------------LGH------PV 80 (285)
T ss_dssp HHHHHTTCSEEECCSSCSSCSSCCCCCHHHHHHHHHHHHHTTCCGGGBCCBCCTTCC------------TTC------SS
T ss_pred HHHHHcCCCEEEeeCCCCCcCcCCCCCHHHHHHHHHHHHHcCCCceeEEecCCcccc------------cCC------CC
Confidence 33337899998774321111 124678899999999999998 6777521000 000 00
Q ss_pred Ch--HHHHHHHHHHHHHHHhcCCCEEEEeCCC-------HHH----HHHHHHH--HHcCCCEEEecCCc
Q 020079 264 PP--LLEGEATTRAIRLAEFVNTPLYVVHVMS-------MDA----MEEIAKA--RKAGPNFLNTTIPL 317 (331)
Q Consensus 264 ~~--~~e~~~i~~~~~l~~~~g~~~~i~H~~~-------~~~----~~~i~~~--~~~Gi~v~~~~~p~ 317 (331)
+. ......+++.++++...|++..+.|... ... .+.++++ ++.|+.+..+..+.
T Consensus 81 ~~~r~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~a~~~gv~l~lEn~~~ 149 (285)
T 1qtw_A 81 TEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINIALDKTQGVTAVIENTAG 149 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCEEEECCCBCTTTSCHHHHHHHHHHHHHHHHHHCSSCEEEEECCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCEEEECcCCCCCCCCHHHHHHHHHHHHHHHHhccCCCEEEEecCCC
Confidence 00 0112445677788888888877777532 111 1222222 33677777776653
No 123
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=85.86 E-value=14 Score=31.08 Aligned_cols=44 Identities=14% Similarity=0.061 Sum_probs=31.2
Q ss_pred HHHHHhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEc
Q 020079 190 VMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA 235 (331)
Q Consensus 190 ~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~ 235 (331)
+.+++.|.+++.+.... .....++.++++.+.++++|+.+..|.
T Consensus 24 ~~~~~~G~~~vEl~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~ 67 (290)
T 2qul_A 24 KRIAGLGFDLMEISLGE--FHNLSDAKKRELKAVADDLGLTVMCCI 67 (290)
T ss_dssp HHHHHTTCSEEEEESTT--GGGSCHHHHHHHHHHHHHHTCEEEEEE
T ss_pred HHHHHhCCCEEEEecCC--ccccchhhHHHHHHHHHHcCCceEEec
Confidence 33437899998875432 122235778889999999999998884
No 124
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=85.64 E-value=13 Score=31.83 Aligned_cols=46 Identities=15% Similarity=0.046 Sum_probs=32.5
Q ss_pred HHHHHHHHhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEc
Q 020079 187 EMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA 235 (331)
Q Consensus 187 ~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~ 235 (331)
+++.+. +.|.+++.+..... ....++.++++.+.++++|+.+..|.
T Consensus 41 ~l~~~~-~~G~~~vEl~~~~~--~~~~~~~~~~l~~~l~~~gl~i~~~~ 86 (309)
T 2hk0_A 41 YIEKVA-KLGFDIIEVAAHHI--NEYSDAELATIRKSAKDNGIILTAGI 86 (309)
T ss_dssp HHHHHH-HTTCSEEEEEHHHH--TTSCHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHH-HhCCCEEEeccCCc--cccchhhHHHHHHHHHHcCCeEEEec
Confidence 344444 78999998764321 11234778889999999999999985
No 125
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=85.46 E-value=4.3 Score=35.63 Aligned_cols=50 Identities=10% Similarity=0.225 Sum_probs=32.1
Q ss_pred HHHHHHHHHHhCCCeEEEEEec-CCCCc--------CCHHHHHHHHHHHHHcCCcEEEEcCC
Q 020079 185 SDEMEVMVKEKGINSFKFFMAY-KGSFM--------INDELLIEGFKRCKSLGALAMVHAEN 237 (331)
Q Consensus 185 ~~~~~~~~~~~g~~~ik~~~~~-~~~~~--------~~~~~l~~~~~~A~~~g~~v~~H~e~ 237 (331)
.++..+++++.|++.+-+.++. |+.+. .+.+.|+++-+ +.++|+..|-.+
T Consensus 155 Peea~~Fv~~TgvD~LAvaiGt~HG~Yk~~~~p~~~L~~~~L~~I~~---~~~vpLVlHGgS 213 (323)
T 2isw_A 155 PQDAKKFVELTGVDALAVAIGTSHGAYKFKSESDIRLAIDRVKTISD---LTGIPLVMHGSS 213 (323)
T ss_dssp HHHHHHHHHHHCCSEEEECSSCCSSSBCCCC----CCCCHHHHHHHH---HHCSCEEECSCC
T ss_pred HHHHHHHHHHHCCCEEEEecCccccccCCCCCcccccCHHHHHHHHH---HhCCCeEEECCC
Confidence 5667777767899988664432 44332 44556666644 348999999644
No 126
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A*
Probab=84.86 E-value=12 Score=31.43 Aligned_cols=111 Identities=16% Similarity=0.146 Sum_probs=61.5
Q ss_pred HHHHHHHhCCCeEEEEEecCC---CCcCCHHHHHHHHHHHHHcCCc---EEEEcCCchhhHHHHHHHHHcCCCCcccccc
Q 020079 188 MEVMVKEKGINSFKFFMAYKG---SFMINDELLIEGFKRCKSLGAL---AMVHAENGDAVFEGQKRMIELGITGPEGHAL 261 (331)
Q Consensus 188 ~~~~~~~~g~~~ik~~~~~~~---~~~~~~~~l~~~~~~A~~~g~~---v~~H~e~~~~~~~~~~~~~~~G~~~~~~~~~ 261 (331)
++.+. +.|.+++.++..... ....+++.++++.+.++++|+. +.+|..-.-. +..+
T Consensus 18 l~~~~-~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~h~~~~~~------------~~~~----- 79 (287)
T 2x7v_A 18 PQDTV-NIGGNSFQIFPHNARSWSAKLPSDEAATKFKREMKKHGIDWENAFCHSGYLIN------------LASP----- 79 (287)
T ss_dssp HHHHH-HTTCSEEEECSCCCSSSCCCCCCHHHHHHHHHHHHHHTCCGGGEEEECCTTCC------------TTCS-----
T ss_pred HHHHH-HcCCCEEEEeCCCcccccccCCCHHHHHHHHHHHHHcCCCcceeEEecccccc------------cCCC-----
Confidence 33444 789999887542211 1234678899999999999998 7888521000 0000
Q ss_pred cCCh--HHHHHHHHHHHHHHHhcCCCEEEEeCCC------HH----HHHHHHHHHH--cCCCEEEecCCc
Q 020079 262 SRPP--LLEGEATTRAIRLAEFVNTPLYVVHVMS------MD----AMEEIAKARK--AGPNFLNTTIPL 317 (331)
Q Consensus 262 ~~~~--~~e~~~i~~~~~l~~~~g~~~~i~H~~~------~~----~~~~i~~~~~--~Gi~v~~~~~p~ 317 (331)
.+. ......+++.+++++..|++..+.|... .. ..+.++++.+ .|+.+..+..+.
T Consensus 80 -~~~~r~~~~~~~~~~i~~A~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~l~~l~~~~~gv~l~lEn~~~ 148 (287)
T 2x7v_A 80 -KDDIWQKSVELLKKEVEICRKLGIRYLNIHPGSHLGTGEEEGIDRIVRGLNEVLNNTEGVVILLENVSQ 148 (287)
T ss_dssp -SHHHHHHHHHHHHHHHHHHHHHTCCEEEECCEECTTSCHHHHHHHHHHHHHHHHTTCCSCEEEEECCCC
T ss_pred -CHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHcccCCCEEEEeCCCC
Confidence 000 0112345677788888888877776431 11 1222333222 577777776553
No 127
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=83.55 E-value=7.8 Score=32.95 Aligned_cols=122 Identities=14% Similarity=0.037 Sum_probs=74.0
Q ss_pred hhHHHHHHHHHHhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHc-CCcEEEEcCCchhhHHHHHHHHHcCCCCcccccc
Q 020079 183 VVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL-GALAMVHAENGDAVFEGQKRMIELGITGPEGHAL 261 (331)
Q Consensus 183 ~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~-g~~v~~H~e~~~~~~~~~~~~~~~G~~~~~~~~~ 261 (331)
...+..+++. +.|++.|.+..+ ......+|++++++...++. ++|+.+=..+++..+...+.+ .|.. ....
T Consensus 26 ~a~~~a~~~v-~~GAdiIDIg~g--~~~v~~~ee~~rvv~~i~~~~~~pisIDT~~~~v~~aAl~a~--~Ga~---iINd 97 (262)
T 1f6y_A 26 PVQEWARRQE-EGGARALDLNVG--PAVQDKVSAMEWLVEVTQEVSNLTLCLDSTNIKAIEAGLKKC--KNRA---MINS 97 (262)
T ss_dssp HHHHHHHHHH-HHTCSEEEEBCC------CHHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHC--SSCE---EEEE
T ss_pred HHHHHHHHHH-HCCCcEEEECCC--CCCCChHHHHHHHHHHHHHhCCCeEEEeCCCHHHHHHHHhhC--CCCC---EEEE
Confidence 3445555666 689988876542 12233577888888887766 889988877666555444332 1321 1111
Q ss_pred cCChHHHHHHHHHHHHHHHhcCCCEEEEeCCC-----------HHHHHHHHHHHHcCCC---EEEecC
Q 020079 262 SRPPLLEGEATTRAIRLAEFVNTPLYVVHVMS-----------MDAMEEIAKARKAGPN---FLNTTI 315 (331)
Q Consensus 262 ~~~~~~e~~~i~~~~~l~~~~g~~~~i~H~~~-----------~~~~~~i~~~~~~Gi~---v~~~~~ 315 (331)
.... .+..++.+.+++++|+++.+.|... ..-.+.++++++.|++ |..|..
T Consensus 98 vs~~---~d~~~~~~~~~a~~~~~vvlmh~~~~G~p~t~~~~~~~~~~~~~~a~~~Gi~~~~IilDPg 162 (262)
T 1f6y_A 98 TNAE---REKVEKLFPLAVEHGAALIGLTMNKTGIPKDSDTRLAFAMELVAAADEFGLPMEDLYIDPL 162 (262)
T ss_dssp ECSC---HHHHHHHHHHHHHTTCEEEEESCCSSCSCSSHHHHHHHHHHHHHHHHHHTCCGGGEEEECC
T ss_pred CCCC---cccHHHHHHHHHHhCCcEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCcccEEEeCC
Confidence 1111 1334567788899999999999731 1113467778899995 887654
No 128
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=83.13 E-value=16 Score=33.88 Aligned_cols=123 Identities=13% Similarity=0.104 Sum_probs=67.1
Q ss_pred HHHHHHHHhCCceEEecCcCCCCC-cHHHHHHHHHHHhccceeeccccccccCCChhhHHHHHHHHHHhCCCeEEEEEec
Q 020079 128 FSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAY 206 (331)
Q Consensus 128 ~~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~ 206 (331)
....+.++.+|+..++-+....+. +....++..++.+......+.+..+.....+...+.++++. +.|++.|.+- +.
T Consensus 103 ~~~v~~a~~~Gvd~i~if~~~sd~~ni~~~i~~ak~~G~~v~~~i~~~~~~~~~~e~~~~~a~~l~-~~Gad~I~l~-DT 180 (464)
T 2nx9_A 103 DTFVERAVKNGMDVFRVFDAMNDVRNMQQALQAVKKMGAHAQGTLCYTTSPVHNLQTWVDVAQQLA-ELGVDSIALK-DM 180 (464)
T ss_dssp HHHHHHHHHTTCCEEEECCTTCCTHHHHHHHHHHHHTTCEEEEEEECCCCTTCCHHHHHHHHHHHH-HTTCSEEEEE-ET
T ss_pred HHHHHHHHhCCcCEEEEEEecCHHHHHHHHHHHHHHCCCEEEEEEEeeeCCCCCHHHHHHHHHHHH-HCCCCEEEEc-CC
Confidence 444667888999887744322222 45555666665554433333322222222233334444444 7899877542 22
Q ss_pred CCCCcCCHHHHHHHHHHHHH-cCCcEEEEcCCchhhHHHH-HHHHHcCCC
Q 020079 207 KGSFMINDELLIEGFKRCKS-LGALAMVHAENGDAVFEGQ-KRMIELGIT 254 (331)
Q Consensus 207 ~~~~~~~~~~l~~~~~~A~~-~g~~v~~H~e~~~~~~~~~-~~~~~~G~~ 254 (331)
.+ ...+..+.++++..++ .++++.+|+.++....-.. ....+.|..
T Consensus 181 ~G--~~~P~~v~~lv~~l~~~~~~~i~~H~Hnd~GlAvAN~laAv~AGa~ 228 (464)
T 2nx9_A 181 AG--ILTPYAAEELVSTLKKQVDVELHLHCHSTAGLADMTLLKAIEAGVD 228 (464)
T ss_dssp TS--CCCHHHHHHHHHHHHHHCCSCEEEEECCTTSCHHHHHHHHHHTTCS
T ss_pred CC--CcCHHHHHHHHHHHHHhcCCeEEEEECCCCChHHHHHHHHHHhCCC
Confidence 22 3467777777776654 5899999997765543322 223455553
No 129
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=82.53 E-value=22 Score=30.19 Aligned_cols=45 Identities=9% Similarity=-0.006 Sum_probs=30.8
Q ss_pred HHHHHHhCCCeEEEEEecCC----CCcCCHHHHHHHHHHHHHcCCcEEE
Q 020079 189 EVMVKEKGINSFKFFMAYKG----SFMINDELLIEGFKRCKSLGALAMV 233 (331)
Q Consensus 189 ~~~~~~~g~~~ik~~~~~~~----~~~~~~~~l~~~~~~A~~~g~~v~~ 233 (331)
.+.+.+.|.+++.+...... ....+.+.++++.+.++++|+.+..
T Consensus 36 l~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~ 84 (295)
T 3cqj_A 36 LQLAKTLGFDFVEMSVDETDERLSRLDWSREQRLALVNAIVETGVRVPS 84 (295)
T ss_dssp HHHHHHTTCSEEEEECCSSHHHHGGGGCCHHHHHHHHHHHHHHCCEEEE
T ss_pred HHHHHhcCCCEEEEecCCcccccCcccCCHHHHHHHHHHHHHcCCeEEE
Confidence 33343789999887543210 1234678889999999999999864
No 130
>3iar_A Adenosine deaminase; purine metabolism structural genomics, structural genomics consortium, SGC, D mutation, hereditary hemolytic anemia, hydrolase; HET: 3D1; 1.52A {Homo sapiens} SCOP: c.1.9.1 PDB: 2bgn_E* 1w1i_E* 1qxl_A* 1krm_A* 1vfl_A 1ndv_A* 1ndy_A* 1ndz_A* 1o5r_A* 1uml_A* 1v79_A* 1v7a_A* 1ndw_A 1wxy_A* 1wxz_A* 2e1w_A* 2z7g_A* 2ada_A* 3mvi_A 1a4l_A* ...
Probab=82.51 E-value=10 Score=33.94 Aligned_cols=40 Identities=13% Similarity=0.073 Sum_probs=26.9
Q ss_pred cCCCEEEEeCCCHH-HHHHHHHHHHcCCCEEEecCCccccchhh
Q 020079 282 VNTPLYVVHVMSMD-AMEEIAKARKAGPNFLNTTIPLCDSCSNI 324 (331)
Q Consensus 282 ~g~~~~i~H~~~~~-~~~~i~~~~~~Gi~v~~~~~p~~~~~~~~ 324 (331)
.|.. .+.|+.... .-+.++.++++|+.+. +||.+|..++.
T Consensus 228 lg~~-RIgHgv~l~~d~~l~~~l~~~~i~le--~cP~SN~~l~~ 268 (367)
T 3iar_A 228 LKTE-RLGHGYHTLEDQALYNRLRQENMHFE--ICPWSSYLTGA 268 (367)
T ss_dssp SCCS-EEEECGGGGGCHHHHHHHHHTTCEEE--ECHHHHHHTSS
T ss_pred cCCc-eeeeeeeecCCHHHHHHHHhCCcEEE--ECHHHHHHhCC
Confidence 3443 367765432 2367889999997665 88988877653
No 131
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=82.25 E-value=11 Score=32.02 Aligned_cols=33 Identities=9% Similarity=-0.176 Sum_probs=18.3
Q ss_pred HhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEE
Q 020079 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAM 232 (331)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~ 232 (331)
+.|.+++.+.... ..+.++++.+.++++|+.+.
T Consensus 49 ~~G~~~vEl~~~~------~~~~~~~~~~~l~~~gl~v~ 81 (287)
T 3kws_A 49 KLGVVGFEPGGGG------LAGRVNEIKQALNGRNIKVS 81 (287)
T ss_dssp HTTCCEEECBSTT------CGGGHHHHHHHHTTSSCEEC
T ss_pred HcCCCEEEecCCc------hHHHHHHHHHHHHHcCCeEE
Confidence 5676666543210 12445666666667777664
No 132
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=81.74 E-value=22 Score=30.32 Aligned_cols=123 Identities=14% Similarity=0.028 Sum_probs=71.0
Q ss_pred hhhHHHHHHHHHHhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHc-CCcEEEEcCCchhhHHHHHHHHHcCCCCccccc
Q 020079 182 EVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL-GALAMVHAENGDAVFEGQKRMIELGITGPEGHA 260 (331)
Q Consensus 182 ~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~-g~~v~~H~e~~~~~~~~~~~~~~~G~~~~~~~~ 260 (331)
+...+..+++. +.|++.|.+.... +..-..+.+..+++..++. ++|+.+=..+.+..+...+.+ .|..- ..
T Consensus 34 ~~a~~~a~~~v-~~GAdiIDIg~~s--~~~eE~~rv~~vi~~l~~~~~~pisIDT~~~~v~~aal~a~--~Ga~i---IN 105 (271)
T 2yci_X 34 RPIQEWARRQA-EKGAHYLDVNTGP--TADDPVRVMEWLVKTIQEVVDLPCCLDSTNPDAIEAGLKVH--RGHAM---IN 105 (271)
T ss_dssp HHHHHHHHHHH-HTTCSEEEEECCS--CSSCHHHHHHHHHHHHHHHCCCCEEEECSCHHHHHHHHHHC--CSCCE---EE
T ss_pred HHHHHHHHHHH-HCCCCEEEEcCCc--CchhHHHHHHHHHHHHHHhCCCeEEEeCCCHHHHHHHHHhC--CCCCE---EE
Confidence 34455555666 6888888765432 1122355666666666554 889988877666555544332 13211 11
Q ss_pred ccCChHHHHHHHHHHHHHHHhcCCCEEEEeCC------C-----HHHHHHHHHHHHcCCC---EEEecC
Q 020079 261 LSRPPLLEGEATTRAIRLAEFVNTPLYVVHVM------S-----MDAMEEIAKARKAGPN---FLNTTI 315 (331)
Q Consensus 261 ~~~~~~~e~~~i~~~~~l~~~~g~~~~i~H~~------~-----~~~~~~i~~~~~~Gi~---v~~~~~ 315 (331)
..... .+...+.+.+++++|+++.+.|.. + ..-.+.++.+.+.|++ |..|..
T Consensus 106 dvs~~---~d~~~~~~~~~a~~~~~vv~m~~d~~G~p~t~~~~~~~l~~~~~~a~~~Gi~~~~IilDPg 171 (271)
T 2yci_X 106 STSAD---QWKMDIFFPMAKKYEAAIIGLTMNEKGVPKDANDRSQLAMELVANADAHGIPMTELYIDPL 171 (271)
T ss_dssp EECSC---HHHHHHHHHHHHHHTCEEEEESCBTTBCCCSHHHHHHHHHHHHHHHHHTTCCGGGEEEECC
T ss_pred ECCCC---ccccHHHHHHHHHcCCCEEEEecCCCCCCCCHHHHHHHHHHHHHHHHHCCCCcccEEEecC
Confidence 11111 122356677888899999999972 1 1123456777889987 776643
No 133
>3b0x_A DNA polymerase beta family (X family); structural genomics, riken structural genomics/proteomics in RSGI, polxc, PHP, DRP lyase; HET: DNA DGT; 1.36A {Thermus thermophilus} PDB: 3au2_A* 3au6_A* 3auo_A* 3b0y_A*
Probab=81.65 E-value=8.1 Score=36.94 Aligned_cols=33 Identities=21% Similarity=0.190 Sum_probs=24.4
Q ss_pred cccccccccCCCCCCCChhhHHHHHHHHHhCCceEEe
Q 020079 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHI 143 (331)
Q Consensus 107 ~ID~H~H~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~ 143 (331)
++|.|+|...+ -|..+++++ .+.+.+.|++.+.
T Consensus 338 ~~DlH~HT~~S-DG~~t~ee~---v~~A~~~G~~~ia 370 (575)
T 3b0x_A 338 KGDLQVHSTYS-DGQNTLEEL---WEAAKTMGYRYLA 370 (575)
T ss_dssp CEEEEECCTTT-TCSCCHHHH---HHHHHHTTCSEEE
T ss_pred CeeEeecCCcc-CCCCCHHHH---HHHHHHCCCCEEE
Confidence 78999998766 354555544 7778889998765
No 134
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=81.47 E-value=16 Score=34.76 Aligned_cols=122 Identities=12% Similarity=0.021 Sum_probs=76.9
Q ss_pred hHHHHHHHHHHhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHc-CCcEEEEcCCchhhHHHHHHHHHcCCCCccccccc
Q 020079 184 VSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL-GALAMVHAENGDAVFEGQKRMIELGITGPEGHALS 262 (331)
Q Consensus 184 ~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~-g~~v~~H~e~~~~~~~~~~~~~~~G~~~~~~~~~~ 262 (331)
..+..+++. +.|++.|.+. +.......++++++++...++. ++|+.+=..+.+..+...+.+ .|..- ....
T Consensus 342 a~~~A~~~v-~~GAdiIDIg--pg~~~v~~~ee~~rvv~~i~~~~~vpisIDT~~~~v~eaal~~~--~G~~i---INdi 413 (566)
T 1q7z_A 342 VIKEAKTQV-EKGAEVLDVN--FGIESQIDVRYVEKIVQTLPYVSNVPLSLDIQNVDLTERALRAY--PGRSL---FNSA 413 (566)
T ss_dssp HHHHHHHHH-HTTCSEEEEE--CSSGGGSCHHHHHHHHHHHHHHTCSCEEEECCCHHHHHHHHHHC--SSCCE---EEEE
T ss_pred HHHHHHHHH-HCCCCEEEEC--CCCCCCCHHHHHHHHHHHHHhhCCceEEEeCCCHHHHHHHHHhc--CCCCE---EEEC
Confidence 344445555 6899999875 3333345688888888777655 999998877776665554433 13221 1110
Q ss_pred CChHHHHHHHHHHHHHHHhcCCCEEEEeCCC----------HHHHHHHHHHHHcCCC--EEEecCC
Q 020079 263 RPPLLEGEATTRAIRLAEFVNTPLYVVHVMS----------MDAMEEIAKARKAGPN--FLNTTIP 316 (331)
Q Consensus 263 ~~~~~e~~~i~~~~~l~~~~g~~~~i~H~~~----------~~~~~~i~~~~~~Gi~--v~~~~~p 316 (331)
..+.+.+.+.+.+++++|+++.+.|... ..-.+.++.+.+.|++ |..|...
T Consensus 414 ---s~~~~~~~~~~~~~~~~g~~vV~m~~~~~~p~t~~~~~~~l~~~~~~a~~~Gi~~~IilDPg~ 476 (566)
T 1q7z_A 414 ---KVDEEELEMKINLLKKYGGTLIVLLMGKDVPKSFEERKEYFEKALKILERHDFSDRVIFDPGV 476 (566)
T ss_dssp ---ESCHHHHHHHHHHHHHHCCEEEEESCSSSCCCSHHHHHHHHHHHHHHHHHTTCGGGEEEECCC
T ss_pred ---CcchhhHHHHHHHHHHhCCeEEEEeCCCCCcCCHHHHHHHHHHHHHHHHHCCCCCcEEEeCCC
Confidence 1111233567788999999999999752 1123467778899995 7776443
No 135
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=81.27 E-value=25 Score=31.18 Aligned_cols=97 Identities=12% Similarity=0.074 Sum_probs=54.7
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEcCCchhhHHHHHH-----------------HHHcCCCCcccccc-cCChHHHHHHHH
Q 020079 212 INDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKR-----------------MIELGITGPEGHAL-SRPPLLEGEATT 273 (331)
Q Consensus 212 ~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~-----------------~~~~G~~~~~~~~~-~~~~~~e~~~i~ 273 (331)
.+.+.++.+.+.+++.|+++..=+-+...++...+. +.+.+-.+...... +... ...+.
T Consensus 88 l~~e~~~~L~~~~~~~Gi~~~st~~d~~svd~l~~~~v~~~KI~S~~~~n~~LL~~va~~gkPviLstGmat---~~Ei~ 164 (349)
T 2wqp_A 88 LNEEDEIKLKEYVESKGMIFISTLFSRAAALRLQRMDIPAYKIGSGECNNYPLIKLVASFGKPIILSTGMNS---IESIK 164 (349)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHTCSCEEECGGGTTCHHHHHHHHTTCSCEEEECTTCC---HHHHH
T ss_pred CCHHHHHHHHHHHHHhCCeEEEeeCCHHHHHHHHhcCCCEEEECcccccCHHHHHHHHhcCCeEEEECCCCC---HHHHH
Confidence 578899999999999999998877666555444211 22222222111111 1111 23344
Q ss_pred HHHHHHHhcCCCEEEEeCCCH-------HHHHHHHHHHHc--CCCEE
Q 020079 274 RAIRLAEFVNTPLYVVHVMSM-------DAMEEIAKARKA--GPNFL 311 (331)
Q Consensus 274 ~~~~l~~~~g~~~~i~H~~~~-------~~~~~i~~~~~~--Gi~v~ 311 (331)
..++.....|..+.++||.+. -.+..+..+|+. +++|.
T Consensus 165 ~Ave~i~~~G~~iiLlhc~s~Yp~~~~~~nL~ai~~lk~~f~~lpVg 211 (349)
T 2wqp_A 165 KSVEIIREAGVPYALLHCTNIYPTPYEDVRLGGMNDLSEAFPDAIIG 211 (349)
T ss_dssp HHHHHHHHHTCCEEEEECCCCSSCCGGGCCTHHHHHHHHHCTTSEEE
T ss_pred HHHHHHHHcCCCEEEEeccCCCCCChhhcCHHHHHHHHHHCCCCCEE
Confidence 555556666668888888752 123445555553 56664
No 136
>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}
Probab=80.82 E-value=26 Score=30.07 Aligned_cols=46 Identities=11% Similarity=0.097 Sum_probs=29.7
Q ss_pred HHHHHHHhCCCeEEEEEecCCCCcCC----HHHHHHHHHHHHHcCCcEEEE
Q 020079 188 MEVMVKEKGINSFKFFMAYKGSFMIN----DELLIEGFKRCKSLGALAMVH 234 (331)
Q Consensus 188 ~~~~~~~~g~~~ik~~~~~~~~~~~~----~~~l~~~~~~A~~~g~~v~~H 234 (331)
+.+.+++.|.+++.++...... ..+ .+..+++.+.++++|+.+..+
T Consensus 40 ~~~~a~~~G~~~vEl~~~~~~~-~~~~~~~~~~~~~~~~~l~~~Gl~i~~~ 89 (316)
T 3qxb_A 40 AGLVRDDLGLEYVQYTYDLTDP-WWPDIERDRRAIAYAKAFRKAGLTIEST 89 (316)
T ss_dssp HHHHHHTSCCCEEEEETTTSCT-TSCHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHcCCCEEEeeccccCc-cccccchhhHHHHHHHHHHHcCCeEEEe
Confidence 3344447899999876432211 112 236778888999999998764
No 137
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=80.62 E-value=4 Score=34.39 Aligned_cols=87 Identities=14% Similarity=0.044 Sum_probs=44.2
Q ss_pred hHHHHHHHHHHhCCCeEEEEEecCCCCcCC-------HHHHHHHHHHHHHcCCcEE-EEcCCchh---hHHHHHHHHHcC
Q 020079 184 VSDEMEVMVKEKGINSFKFFMAYKGSFMIN-------DELLIEGFKRCKSLGALAM-VHAENGDA---VFEGQKRMIELG 252 (331)
Q Consensus 184 ~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~-------~~~l~~~~~~A~~~g~~v~-~H~e~~~~---~~~~~~~~~~~G 252 (331)
..+++++..++.|.....+..... ....+ .+.+++.++.|++.|.+.. +|...... .+...+.
T Consensus 47 ~~~~~~~~l~~~gl~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~v~~~~g~~~~~~~~~~~~~~----- 120 (278)
T 1i60_A 47 SLDDLAEYFQTHHIKPLALNALVF-FNNRDEKGHNEIITEFKGMMETCKTLGVKYVVAVPLVTEQKIVKEEIKKS----- 120 (278)
T ss_dssp CHHHHHHHHHTSSCEEEEEEEEEC-CSSCCHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCBCSSCCCHHHHHHH-----
T ss_pred CHHHHHHHHHHcCCCeeeeccccc-cccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCHHHHHHH-----
Confidence 455666666556664332222111 11012 3456778888888888644 45422110 0111111
Q ss_pred CCCcccccccCChHHHHHHHHHHHHHHHhcCCCEEEEeC
Q 020079 253 ITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHV 291 (331)
Q Consensus 253 ~~~~~~~~~~~~~~~e~~~i~~~~~l~~~~g~~~~i~H~ 291 (331)
-...+.+..+.+++.|+++.+...
T Consensus 121 ---------------~~~~l~~l~~~a~~~gv~l~lEn~ 144 (278)
T 1i60_A 121 ---------------SVDVLTELSDIAEPYGVKIALEFV 144 (278)
T ss_dssp ---------------HHHHHHHHHHHHGGGTCEEEEECC
T ss_pred ---------------HHHHHHHHHHHHHhcCCEEEEEec
Confidence 134566777778888888766544
No 138
>3aal_A Probable endonuclease 4; endoiv, DNA repair, base excision repair, TIM barrel, DNA DA endonuclease, hydrolase, metal-binding; 1.60A {Geobacillus kaustophilus} PDB: 1xp3_A
Probab=80.47 E-value=7.7 Score=33.35 Aligned_cols=88 Identities=18% Similarity=0.127 Sum_probs=50.3
Q ss_pred HHHHHHHHHhCCCeEEEEEecCCC---CcCCHHHHHHHHHHHHHcCC-cEEEEcCCchhhHHHHHHHHHcCCCCcccccc
Q 020079 186 DEMEVMVKEKGINSFKFFMAYKGS---FMINDELLIEGFKRCKSLGA-LAMVHAENGDAVFEGQKRMIELGITGPEGHAL 261 (331)
Q Consensus 186 ~~~~~~~~~~g~~~ik~~~~~~~~---~~~~~~~l~~~~~~A~~~g~-~v~~H~e~~~~~~~~~~~~~~~G~~~~~~~~~ 261 (331)
+.++.+. +.|.+.+.++...... ...+++.++++.+.++++|+ .+.+|..-... +..+
T Consensus 22 ~~l~~~~-~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~h~~~~~n------------l~s~----- 83 (303)
T 3aal_A 22 AASEEAA-SYGANTFMIYTGAPQNTKRKSIEELNIEAGRQHMQAHGIEEIVVHAPYIIN------------IGNT----- 83 (303)
T ss_dssp HHHHHHH-HTTCSEEEEESSCTTCCCCCCSGGGCHHHHHHHHHHTTCCEEEEECCTTCC------------TTCS-----
T ss_pred HHHHHHH-HcCCCEEEEcCCCCCccCCCCCCHHHHHHHHHHHHHcCCceEEEecccccc------------CCCC-----
Confidence 3344444 7899999875432111 12335677888888999999 78999521100 0000
Q ss_pred cC-Ch--HHHHHHHHHHHHHHHhcCCCEEEEeCC
Q 020079 262 SR-PP--LLEGEATTRAIRLAEFVNTPLYVVHVM 292 (331)
Q Consensus 262 ~~-~~--~~e~~~i~~~~~l~~~~g~~~~i~H~~ 292 (331)
. +. ......+.+.++++...|++..+.|..
T Consensus 84 -d~~~~r~~~~~~~~~~i~~A~~lGa~~vv~h~g 116 (303)
T 3aal_A 84 -TNLDTFSLGVDFLRAEIERTEAIGAKQLVLHPG 116 (303)
T ss_dssp -SCHHHHHHHHHHHHHHHHHHHHHTCSEEEECCE
T ss_pred -CcHHHHHHHHHHHHHHHHHHHHcCCCEEEECCC
Confidence 0 00 011244566778888888887777643
No 139
>1xla_A D-xylose isomerase; isomerase(intramolecular oxidoreductase); 2.30A {Arthrobacter SP} SCOP: c.1.15.3 PDB: 1die_A* 1did_A 1xlb_A 1xlc_A* 1xld_A* 1xle_A 1xlf_A* 1xlg_A* 1xlh_A 1xli_A* 1xlj_A* 1xlk_A 1xll_A 1xlm_A* 4xia_A* 5xia_A*
Probab=80.43 E-value=17 Score=32.69 Aligned_cols=118 Identities=14% Similarity=0.090 Sum_probs=63.0
Q ss_pred HHHHHHHHhCCCeEEEEEecCCCCcCC----HHHHHHHHHHHHHcCCcEEEEcCCc-hhhHHHHHHHHHcC-CCCccccc
Q 020079 187 EMEVMVKEKGINSFKFFMAYKGSFMIN----DELLIEGFKRCKSLGALAMVHAENG-DAVFEGQKRMIELG-ITGPEGHA 260 (331)
Q Consensus 187 ~~~~~~~~~g~~~ik~~~~~~~~~~~~----~~~l~~~~~~A~~~g~~v~~H~e~~-~~~~~~~~~~~~~G-~~~~~~~~ 260 (331)
.++.+. +.|.+++.+......+...+ .+.++++.+.++++|+.+..|.... .... + ..| +..+
T Consensus 38 ~l~~aa-~~G~d~VEl~~~~~~~~~~~~~~~~~~~~~l~~~l~~~GL~i~~~~~~~f~~p~-----~-~~g~l~~~---- 106 (394)
T 1xla_A 38 AVHKLA-ELGAYGITFHDNDLIPFDATEAEREKILGDFNQALKDTGLKVPMVTTNLFSHPV-----F-KDGGFTSN---- 106 (394)
T ss_dssp HHHHHH-HHTCCEEEEEHHHHSCTTCCHHHHHHHHHHHHHHHHHHCCBCCEEECCCSSSGG-----G-TTCSTTCS----
T ss_pred HHHHHH-HcCCCEEEecCCccCcccCCchhhHHHHHHHHHHHHHcCCeEEEEecCccCCcc-----c-cCCccCCC----
Confidence 344444 78999997764211111112 4578888999999999987763210 0000 0 000 0000
Q ss_pred ccCCh--HHHHHHHHHHHHHHHhcCCCEEEEeCCC-----------H-------HHHH-HHHHHHHcC--CCEEEecCCc
Q 020079 261 LSRPP--LLEGEATTRAIRLAEFVNTPLYVVHVMS-----------M-------DAME-EIAKARKAG--PNFLNTTIPL 317 (331)
Q Consensus 261 ~~~~~--~~e~~~i~~~~~l~~~~g~~~~i~H~~~-----------~-------~~~~-~i~~~~~~G--i~v~~~~~p~ 317 (331)
.+. ......+++.++++...|++..+.|... . +.+. ..+.+++.| +.+..+..|.
T Consensus 107 --d~~~r~~~i~~~~~~i~~A~~LGa~~vvv~~G~~g~~~~~~~~~~~~~~~~~e~L~~l~~~A~~~G~~v~l~lE~~~~ 184 (394)
T 1xla_A 107 --DRSIRRFALAKVLHNIDLAAEMGAETFVMWGGREGSEYDGSKDLAAALDRMREGVDTAAGYIKDKGYNLRIALEPKPN 184 (394)
T ss_dssp --SHHHHHHHHHHHHHHHHHHHHTTCSEEEECCTTCEESSGGGCCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEECCCSS
T ss_pred --CHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCCCccccccccCHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCC
Confidence 000 0112456778888888898877776431 0 1222 234456788 8888776653
No 140
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=78.95 E-value=14 Score=31.07 Aligned_cols=22 Identities=9% Similarity=-0.105 Sum_probs=14.5
Q ss_pred HHHHHHHHHHHhcCCCEEEEeC
Q 020079 270 EATTRAIRLAEFVNTPLYVVHV 291 (331)
Q Consensus 270 ~~i~~~~~l~~~~g~~~~i~H~ 291 (331)
..+.+..+++++.|+++.+...
T Consensus 123 ~~l~~l~~~a~~~Gv~l~lE~~ 144 (286)
T 3dx5_A 123 NRIRMICELFAQHNMYVLLETH 144 (286)
T ss_dssp HHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHHHhCCEEEEecC
Confidence 4556677777777877655543
No 141
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=78.79 E-value=19 Score=31.16 Aligned_cols=44 Identities=5% Similarity=-0.004 Sum_probs=27.8
Q ss_pred HHHHHhCCCeEEEEEecCCCCc----CCHHHHHHHHHHHHHcCCcEEE
Q 020079 190 VMVKEKGINSFKFFMAYKGSFM----INDELLIEGFKRCKSLGALAMV 233 (331)
Q Consensus 190 ~~~~~~g~~~ik~~~~~~~~~~----~~~~~l~~~~~~A~~~g~~v~~ 233 (331)
+.+.+.|.+++.+...+..... .+++.++++.+.++++|+.+..
T Consensus 22 ~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~ 69 (340)
T 2zds_A 22 RLARDFGYDGLELACWGDHFEVDKALADPSYVDSRHQLLDKYGLKCWA 69 (340)
T ss_dssp HHHHHHTCSEEEEESSTTTCCHHHHHHCTTHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHcCCCEEEeccccccCCccccccCHHHHHHHHHHHHHcCCeEEE
Confidence 3333789999987643111100 1334578888999999999853
No 142
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=78.56 E-value=33 Score=29.85 Aligned_cols=126 Identities=7% Similarity=-0.094 Sum_probs=73.8
Q ss_pred hHHHHHHHHHHhCCCeEEEEEecC--CCCcCCHHHHHHHHHHHH-HcCCcEEE-EcCCchhhHHHHHHHHHcCCCCcccc
Q 020079 184 VSDEMEVMVKEKGINSFKFFMAYK--GSFMINDELLIEGFKRCK-SLGALAMV-HAENGDAVFEGQKRMIELGITGPEGH 259 (331)
Q Consensus 184 ~~~~~~~~~~~~g~~~ik~~~~~~--~~~~~~~~~l~~~~~~A~-~~g~~v~~-H~e~~~~~~~~~~~~~~~G~~~~~~~ 259 (331)
..+..+++. +.|++.|.+..... +....+.++..++++..+ ..++|+.+ =+.+++.-....+...+.|.......
T Consensus 76 ~~~~A~~~v-~~GAdiIDIg~~StrP~~~~vs~eee~~vV~~v~~~~~vplsI~DT~~~~~~~~V~eaal~aga~~k~iI 154 (310)
T 2h9a_B 76 PVAWAKKCV-EYGADIVALRLVSAHPDGQNRSGAELAEVCKAVADAIDVPLMIIGCGVEEKDAEIFPVIGEALSGRNCLL 154 (310)
T ss_dssp HHHHHHHHH-HTTCSEEEEECGGGCTTTTCCCHHHHHHHHHHHHHHCSSCEEEECCSCHHHHHHHHHHHHHHTTTSCCEE
T ss_pred HHHHHHHHH-HcCCcEEEEeCccCCCCCCCCCHHHHHHHHHHHHHhCCceEEEECCCCCCCCHHHHHHHHHhCCCCCCEE
Confidence 344445555 78999887765321 122355565555666555 44999998 66444444444444455554311111
Q ss_pred cccCChHHHHHHHHHHHHHHHhcCCCEEEEeCCCH-HHHHHHHHHHHcCC---CEEEecC
Q 020079 260 ALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSM-DAMEEIAKARKAGP---NFLNTTI 315 (331)
Q Consensus 260 ~~~~~~~~e~~~i~~~~~l~~~~g~~~~i~H~~~~-~~~~~i~~~~~~Gi---~v~~~~~ 315 (331)
..... ...++.+.++.++|+++.+.|...- .-.+.++++.+.|+ +|..|..
T Consensus 155 Ndvs~-----~~~~~~~~~aa~~g~~vv~m~~~dv~~l~~~~~~a~~~Gi~~e~IilDPg 209 (310)
T 2h9a_B 155 SSATK-----DNYKPIVATCMVHGHSVVASAPLDINLSKQLNIMIMEMNLAPNRIIMDPL 209 (310)
T ss_dssp EEECT-----TTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHHTTTCCGGGEEEECC
T ss_pred EECCC-----CccHHHHHHHHHhCCCEEEEChhHHHHHHHHHHHHHHCCCChhhEEEeCC
Confidence 11111 1235667888999999999997432 33456788899999 4776644
No 143
>4inf_A Metal-dependent hydrolase; amidohydrolase, metal binding site, enzyme functi initiative, EFI; 1.48A {Novosphingobium aromaticivorans} PDB: 4ing_A*
Probab=77.65 E-value=1.9 Score=38.88 Aligned_cols=56 Identities=14% Similarity=0.221 Sum_probs=42.8
Q ss_pred hhhHHHHHHHHHHhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEcCCc
Q 020079 182 EVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENG 238 (331)
Q Consensus 182 ~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~ 238 (331)
+...++++++.++.|..++++.....+ ...+++.+..+++.+.++|++|.+|....
T Consensus 159 ~~a~~EL~r~~~~~G~~Gv~l~~~~~g-~~l~d~~~~pi~~~~~e~g~pV~iH~g~~ 214 (373)
T 4inf_A 159 EWSAREIHRGARELGFKGIQINSHTQG-RYLDEEFFDPIFRALVEVDQPLYIHPATS 214 (373)
T ss_dssp HHHHHHHHHHHHTSCCCCEEECSCBTT-BCTTSGGGHHHHHHHHHHTCCEEECCCCC
T ss_pred HHHHHHHHHHHhhcCceEEEECCCCCC-CCCCCcchHHHHHHHHHcCCeEEECCCCC
Confidence 345678888884459999987544332 34577889999999999999999998543
No 144
>2a3l_A AMP deaminase, AMPD; atampd, AT2G38280, adenosine 5'-monophosphate deaminase, COF 5'-phosphate, structural genomics; HET: CF5; 3.34A {Arabidopsis thaliana} SCOP: c.1.9.1
Probab=77.62 E-value=0.43 Score=46.66 Aligned_cols=102 Identities=11% Similarity=-0.012 Sum_probs=56.6
Q ss_pred HHHHHHHH-cCC---cEEEEcCCchhhHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHHHhcCCCEEEEeCCCH
Q 020079 219 EGFKRCKS-LGA---LAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSM 294 (331)
Q Consensus 219 ~~~~~A~~-~g~---~v~~H~e~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~e~~~i~~~~~l~~~~g~~~~i~H~~~~ 294 (331)
..+..+++ .|+ ++++|+......+...+.+ .|... -+|+...... ...++++.+.++.+.+|..|+.
T Consensus 502 ~~Ln~ar~~~Gl~~i~~t~HaGE~~~~e~l~~al--Lg~~R-IgHGv~l~ed------p~Li~lla~~~I~vevCP~SN~ 572 (701)
T 2a3l_A 502 YVLNKLRESKGMTTITLRPHSGEAGDIDHLAATF--LTCHS-IAHGINLRKS------PVLQYLYYLAQIGLAMSPLSNN 572 (701)
T ss_dssp HHHHHHHTTTTCCCCEECCCCSSSSCTHHHHHHH--HHCSS-CSCCGGGGGC------HHHHHHHHHHTCCEEECHHHHT
T ss_pred HHHHHHHHHcCCCCCCcccccCCCCCHHHHHHHh--cCCCe-EEEEeecccC------HHHHHHHHHcCCcEEECccchh
Confidence 34556675 687 8999973332333333333 23222 2344322111 2345677788888666665432
Q ss_pred ---HHHH--HHHHHHHcCCCEEEecC-Cccccc--hhhhhhhc
Q 020079 295 ---DAME--EIAKARKAGPNFLNTTI-PLCDSC--SNIIRMVE 329 (331)
Q Consensus 295 ---~~~~--~i~~~~~~Gi~v~~~~~-p~~~~~--~~~~~~~~ 329 (331)
.+++ +++++.++|++|+.+|. |-.+.. ..+.+.+.
T Consensus 573 kl~~~~~~HPi~~ll~~Gv~VsLgTDdp~~~~~t~~dL~~Ey~ 615 (701)
T 2a3l_A 573 SLFLDYHRNPFPVFFLRGLNVSLSTDDPLQIHLTKEPLVEEYS 615 (701)
T ss_dssp TTTCCSTTCSHHHHHHTTCCEEECCBCHHHHCCSSSHHHHHHH
T ss_pred hhccCchHhHHHHHHHCCCcEEEeCCCccccCCCCcCHHHHHH
Confidence 2344 78999999999998876 333333 14555443
No 145
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=76.67 E-value=13 Score=32.44 Aligned_cols=50 Identities=20% Similarity=0.183 Sum_probs=33.8
Q ss_pred HHHHHHHHHHhCCCeEEEEEec-CCC------CcCCHHHHHHHHHHHHHcCCcEEEEcCC
Q 020079 185 SDEMEVMVKEKGINSFKFFMAY-KGS------FMINDELLIEGFKRCKSLGALAMVHAEN 237 (331)
Q Consensus 185 ~~~~~~~~~~~g~~~ik~~~~~-~~~------~~~~~~~l~~~~~~A~~~g~~v~~H~e~ 237 (331)
.++..+++++.|++.+-+.++. |+. +..+.+.|+++- +.-+.|+..|-.+
T Consensus 157 Peea~~Fv~~TgvD~LAvaiGt~HG~Yk~~~~p~Ld~~~L~~I~---~~~~~PLVlHGgS 213 (307)
T 3n9r_A 157 PKEAEQFVKESQVDYLAPAIGTSHGAFKFKGEPKLDFERLQEVK---RLTNIPLVLHGAS 213 (307)
T ss_dssp HHHHHHHHHHHCCSEEEECSSCCSSSBCCSSSCCCCHHHHHHHH---HHHCSCEEESSCC
T ss_pred HHHHHHHHHHHCCCEEEEecCCcccccCCCCCCccCHHHHHHHH---hcCCCCeEEeCCC
Confidence 4666777767899988664432 332 456788888882 2348999999654
No 146
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=75.89 E-value=37 Score=32.01 Aligned_cols=124 Identities=13% Similarity=0.097 Sum_probs=65.1
Q ss_pred HHHHHHHHHhCCceEEecCcCCCCC-cHHHHHHHHHHHhccceeeccccccccCCChhhHHHHHHHHHHhCCCeEEEEEe
Q 020079 127 FFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMA 205 (331)
Q Consensus 127 ~~~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~ 205 (331)
.....+.++.+|+..++-+....+. +....++..++.+......+.+..+.....+...+.++.+. +.|++.|.+- +
T Consensus 119 ~~~~ve~a~~aGvd~vrIf~s~sd~~ni~~~i~~ak~~G~~v~~~i~~~~~~~~~~e~~~~~a~~l~-~~Gad~I~L~-D 196 (539)
T 1rqb_A 119 VDRFVDKSAENGMDVFRVFDAMNDPRNMAHAMAAVKKAGKHAQGTICYTISPVHTVEGYVKLAGQLL-DMGADSIALK-D 196 (539)
T ss_dssp HHHHHHHHHHTTCCEEEECCTTCCTHHHHHHHHHHHHTTCEEEEEEECCCSTTCCHHHHHHHHHHHH-HTTCSEEEEE-E
T ss_pred cHHHHHHHHhCCCCEEEEEEehhHHHHHHHHHHHHHHCCCeEEEEEEeeeCCCCCHHHHHHHHHHHH-HcCCCEEEeC-C
Confidence 3444677888999887744322222 44455555555554322222222222222222333344444 6898876442 2
Q ss_pred cCCCCcCCHHHHHHHHHHHHH-c--CCcEEEEcCCchhhHHHH-HHHHHcCCC
Q 020079 206 YKGSFMINDELLIEGFKRCKS-L--GALAMVHAENGDAVFEGQ-KRMIELGIT 254 (331)
Q Consensus 206 ~~~~~~~~~~~l~~~~~~A~~-~--g~~v~~H~e~~~~~~~~~-~~~~~~G~~ 254 (331)
..+ ...+..+..+++..++ . ++++.+|+.++....-.. ....+.|..
T Consensus 197 T~G--~~~P~~v~~lv~~l~~~~p~~i~I~~H~Hnd~GlAvAN~laAveAGa~ 247 (539)
T 1rqb_A 197 MAA--LLKPQPAYDIIKAIKDTYGQKTQINLHCHSTTGVTEVSLMKAIEAGVD 247 (539)
T ss_dssp TTC--CCCHHHHHHHHHHHHHHHCTTCCEEEEEBCTTSCHHHHHHHHHHTTCS
T ss_pred CCC--CcCHHHHHHHHHHHHHhcCCCceEEEEeCCCCChHHHHHHHHHHhCCC
Confidence 222 3467777777776654 4 689999997765543332 223455553
No 147
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=75.52 E-value=11 Score=31.53 Aligned_cols=20 Identities=20% Similarity=0.255 Sum_probs=14.3
Q ss_pred HHHHHHHHHHHhcCCCEEEE
Q 020079 270 EATTRAIRLAEFVNTPLYVV 289 (331)
Q Consensus 270 ~~i~~~~~l~~~~g~~~~i~ 289 (331)
..+.+..+.+++.|+++.+.
T Consensus 123 ~~l~~l~~~a~~~gv~l~lE 142 (275)
T 3qc0_A 123 EGIAAVLPHARAAGVPLAIE 142 (275)
T ss_dssp HHHHHHHHHHHHHTCCEEEC
T ss_pred HHHHHHHHHHHHcCCEEEEe
Confidence 45667777788888887665
No 148
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=75.26 E-value=26 Score=30.14 Aligned_cols=65 Identities=17% Similarity=0.214 Sum_probs=40.1
Q ss_pred HHHHHHHHHHhCCCeEEEEEe-cCC----CCcCCHHHHHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHHHcCC
Q 020079 185 SDEMEVMVKEKGINSFKFFMA-YKG----SFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGI 253 (331)
Q Consensus 185 ~~~~~~~~~~~g~~~ik~~~~-~~~----~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~~~G~ 253 (331)
.++..+++++.|++.+-+.++ -|+ .+..+.+.|+++-+.. ++|+..|-.+.-..++ .++..+.|+
T Consensus 161 Peea~~Fv~~TgvD~LAvaiGt~HG~Y~~~p~Ld~~~L~~I~~~v---~vpLVlHGgSG~~~e~-i~~ai~~Gv 230 (288)
T 3q94_A 161 PAECKHLVEATGIDCLAPALGSVHGPYKGEPNLGFAEMEQVRDFT---GVPLVLHGGTGIPTAD-IEKAISLGT 230 (288)
T ss_dssp HHHHHHHHHHHCCSEEEECSSCBSSCCSSSCCCCHHHHHHHHHHH---CSCEEECCCTTCCHHH-HHHHHHTTE
T ss_pred HHHHHHHHHHHCCCEEEEEcCcccCCcCCCCccCHHHHHHHHHhc---CCCEEEeCCCCCCHHH-HHHHHHcCC
Confidence 466777776789998866443 233 3456788887776654 7999999654322222 233445554
No 149
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=74.39 E-value=22 Score=30.69 Aligned_cols=98 Identities=16% Similarity=0.087 Sum_probs=58.0
Q ss_pred HhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHc----CCcEEEEcC--CchhhHHHHHHHHHcCCCCcccccc--cCCh
Q 020079 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL----GALAMVHAE--NGDAVFEGQKRMIELGITGPEGHAL--SRPP 265 (331)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~----g~~v~~H~e--~~~~~~~~~~~~~~~G~~~~~~~~~--~~~~ 265 (331)
+.|++++-+..+.......+.++-+++++.+.+. .+|+.+++. +..+.-+..+...+.|..+--.... ..|.
T Consensus 39 ~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s 118 (301)
T 3m5v_A 39 ENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAGSNATHEAVGLAKFAKEHGADGILSVAPYYNKPT 118 (301)
T ss_dssp HTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCC
T ss_pred HcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCC
Confidence 6788887443222334566788777777766554 578999963 4444444456677888754321110 1222
Q ss_pred HHHHHHHHHHHHHHHhcCCCEEEEeCCC
Q 020079 266 LLEGEATTRAIRLAEFVNTPLYVVHVMS 293 (331)
Q Consensus 266 ~~e~~~i~~~~~l~~~~g~~~~i~H~~~ 293 (331)
+...++-+-.++...+.++.+-+++.
T Consensus 119 --~~~l~~~f~~va~a~~lPiilYn~P~ 144 (301)
T 3m5v_A 119 --QQGLYEHYKAIAQSVDIPVLLYNVPG 144 (301)
T ss_dssp --HHHHHHHHHHHHHHCSSCEEEEECHH
T ss_pred --HHHHHHHHHHHHHhCCCCEEEEeCch
Confidence 22334455566777789998888753
No 150
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=74.30 E-value=41 Score=28.80 Aligned_cols=112 Identities=13% Similarity=-0.062 Sum_probs=61.6
Q ss_pred HHHHHHHhCCCeEEEEEec-C-C-CCcCCH-----HHHHHHHHHHHHcCCcE-EEEcCCchhhHHHHHHHHHcCCCCccc
Q 020079 188 MEVMVKEKGINSFKFFMAY-K-G-SFMIND-----ELLIEGFKRCKSLGALA-MVHAENGDAVFEGQKRMIELGITGPEG 258 (331)
Q Consensus 188 ~~~~~~~~g~~~ik~~~~~-~-~-~~~~~~-----~~l~~~~~~A~~~g~~v-~~H~e~~~~~~~~~~~~~~~G~~~~~~ 258 (331)
.-+.+.+.|.+.+.++... . + .....+ +..+++.+..+++|+.+ .+|....-. -..+.
T Consensus 41 ~l~~aa~~G~~~VEl~~~~~~~~~~~~~~p~~~~~~~~~~l~~~l~~~GL~i~~~~~~~~~~------------~~~~~- 107 (305)
T 3obe_A 41 GLNRLAKAGYTDLEIFGYREDTGKFGDYNPKNTTFIASKDYKKMVDDAGLRISSSHLTPSLR------------EYTKE- 107 (305)
T ss_dssp HHHHHHHHTCCEEEECCBCTTTCCBCCC----CCCBCHHHHHHHHHHTTCEEEEEBCCCSCC------------CCCGG-
T ss_pred HHHHHHHcCCCEEEecccccccccccCcCcccccccCHHHHHHHHHHCCCeEEEeecccccc------------ccchh-
Confidence 3333437899999876430 1 0 011222 25677778888899986 466432000 00000
Q ss_pred ccccCChHHHHHHHHHHHHHHHhcCCCEEEEeCCC----H-------HHHH-HHHHHHHcCCCEEEecCCc
Q 020079 259 HALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMS----M-------DAME-EIAKARKAGPNFLNTTIPL 317 (331)
Q Consensus 259 ~~~~~~~~~e~~~i~~~~~l~~~~g~~~~i~H~~~----~-------~~~~-~i~~~~~~Gi~v~~~~~p~ 317 (331)
........+++.+++++..|++..+.+... . +.+. ..+.+++.|+.+..+..+.
T Consensus 108 -----~~~~~~~~~~~~i~~A~~lG~~~v~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lEn~~~ 173 (305)
T 3obe_A 108 -----NMPKFDEFWKKATDIHAELGVSCMVQPSLPRIENEDDAKVVSEIFNRAGEITKKAGILWGYHNHSN 173 (305)
T ss_dssp -----GHHHHHHHHHHHHHHHHHHTCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHHTTTCEEEEECCSG
T ss_pred -----hHHHHHHHHHHHHHHHHHcCCCEEEeCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCEEEEecCcc
Confidence 001113457788899999999977776321 1 1222 3445678899988875543
No 151
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=72.99 E-value=41 Score=28.22 Aligned_cols=36 Identities=22% Similarity=0.305 Sum_probs=24.5
Q ss_pred hCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEE
Q 020079 195 KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAM 232 (331)
Q Consensus 195 ~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~ 232 (331)
.-++.+|+ ++......+.+.+++.++.++++|+++.
T Consensus 37 ~yID~lKf--g~Gt~~l~~~~~l~eki~l~~~~gV~v~ 72 (251)
T 1qwg_A 37 DYIDFVKF--GWGTSAVIDRDVVKEKINYYKDWGIKVY 72 (251)
T ss_dssp GGCSEEEE--CTTGGGGSCHHHHHHHHHHHHTTTCEEE
T ss_pred hhcceEEe--cCceeeecCHHHHHHHHHHHHHcCCeEE
Confidence 34567775 3444445577788888888888888775
No 152
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=72.93 E-value=25 Score=30.18 Aligned_cols=65 Identities=22% Similarity=0.244 Sum_probs=40.0
Q ss_pred HHHHHHHHHHhCCCeEEEEEec-CC----CCcCCHHHHHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHHHcCC
Q 020079 185 SDEMEVMVKEKGINSFKFFMAY-KG----SFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGI 253 (331)
Q Consensus 185 ~~~~~~~~~~~g~~~ik~~~~~-~~----~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~~~G~ 253 (331)
.++..+++++.|++.+-+.++. |+ .+..+.+.|+++-+. .++|+..|-.+.-..++ .++..+.|+
T Consensus 157 Peea~~Fv~~TgvD~LAvaiGt~HG~Y~~~p~Ld~~~L~~I~~~---~~vpLVlHGgSG~~~e~-i~~ai~~Gv 226 (286)
T 1gvf_A 157 PQEAKRFVELTGVDSLAVAIGTAHGLYSKTPKIDFQRLAEIREV---VDVPLVLHGASDVPDEF-VRRTIELGV 226 (286)
T ss_dssp HHHHHHHHHHHCCSEEEECSSCCSSCCSSCCCCCHHHHHHHHHH---CCSCEEECCCTTCCHHH-HHHHHHTTE
T ss_pred HHHHHHHHHHHCCCEEEeecCccccCcCCCCccCHHHHHHHHHh---cCCCEEEECCCCCCHHH-HHHHHHCCC
Confidence 5667777777899987664432 33 345677777776554 58999999644322222 233445554
No 153
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=72.61 E-value=33 Score=29.56 Aligned_cols=97 Identities=11% Similarity=0.036 Sum_probs=57.3
Q ss_pred HhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHc---CCcEEEEcC--CchhhHHHHHHHHHcCCCCcccccc--cCChH
Q 020079 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAE--NGDAVFEGQKRMIELGITGPEGHAL--SRPPL 266 (331)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~---g~~v~~H~e--~~~~~~~~~~~~~~~G~~~~~~~~~--~~~~~ 266 (331)
+.|++++-+..+.......+.++-+++++.+.+. .+|+.+|+. +..+.-+..+...+.|..+--.... ..|.
T Consensus 39 ~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~- 117 (297)
T 3flu_A 39 ENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAEKAGADYTLSVVPYYNKPS- 117 (297)
T ss_dssp HTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCC-
T ss_pred HcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEECCCCCCCCC-
Confidence 6788887543333334567788777777766543 578888863 4444444456677788754321110 1222
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEeCC
Q 020079 267 LEGEATTRAIRLAEFVNTPLYVVHVM 292 (331)
Q Consensus 267 ~e~~~i~~~~~l~~~~g~~~~i~H~~ 292 (331)
+...++-+-.++...+.++.+-+++
T Consensus 118 -~~~l~~~f~~va~a~~lPiilYn~P 142 (297)
T 3flu_A 118 -QEGIYQHFKTIAEATSIPMIIYNVP 142 (297)
T ss_dssp -HHHHHHHHHHHHHHCCSCEEEEECH
T ss_pred -HHHHHHHHHHHHHhCCCCEEEEECC
Confidence 2233444556677778999888875
No 154
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=71.50 E-value=31 Score=29.77 Aligned_cols=119 Identities=13% Similarity=0.011 Sum_probs=69.4
Q ss_pred hhhHHHHHHHHHHhCCCeEEEEEec---CCCCcCCHHHHHHHHHHHHH---cCCcEEEEcCCchhhHHHHHHHHHcCCCC
Q 020079 182 EVVSDEMEVMVKEKGINSFKFFMAY---KGSFMINDELLIEGFKRCKS---LGALAMVHAENGDAVFEGQKRMIELGITG 255 (331)
Q Consensus 182 ~~~~~~~~~~~~~~g~~~ik~~~~~---~~~~~~~~~~l~~~~~~A~~---~g~~v~~H~e~~~~~~~~~~~~~~~G~~~ 255 (331)
+...+..+++. +.|++.|.+.... .......++++++++...+. .++|+.+=..+.+..+...+ .|..-
T Consensus 46 ~~a~~~a~~~v-~~GAdiIDIGgeSTrPga~~v~~~eE~~Rv~pvi~~l~~~~vpiSIDT~~~~Va~aAl~----aGa~i 120 (294)
T 2y5s_A 46 DDALRRAERMI-AEGADLLDIGGESTRPGAPPVPLDEELARVIPLVEALRPLNVPLSIDTYKPAVMRAALA----AGADL 120 (294)
T ss_dssp THHHHHHHHHH-HTTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHGGGCSCEEEECCCHHHHHHHHH----HTCSE
T ss_pred HHHHHHHHHHH-HCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHhhCCCeEEEECCCHHHHHHHHH----cCCCE
Confidence 44556666666 7899998775422 11122235666655544433 38899888776665554432 34421
Q ss_pred cccccccCChHHHHHHHHHHHHHHHhcCCCEEEEeCC----C----------------HHHHHHHHHHHHcCCC---EEE
Q 020079 256 PEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVM----S----------------MDAMEEIAKARKAGPN---FLN 312 (331)
Q Consensus 256 ~~~~~~~~~~~~e~~~i~~~~~l~~~~g~~~~i~H~~----~----------------~~~~~~i~~~~~~Gi~---v~~ 312 (331)
-.... . .. ..+.+.+++++|+++.+.|.. + ..-.+.++.+.++|++ |..
T Consensus 121 INdVs---g----~~-d~~m~~~~a~~~~~vVlmh~~G~p~tm~~~~~~y~dv~~ev~~~l~~~i~~a~~~Gi~~~~Iil 192 (294)
T 2y5s_A 121 INDIW---G----FR-QPGAIDAVRDGNSGLCAMHMLGEPQTMQVGEPDYGDVVTDVRDFLAARAQALRDAGVAAERICV 192 (294)
T ss_dssp EEETT---T----TC-STTHHHHHSSSSCEEEEECCCEETTTTEECCCCCSSHHHHHHHHHHHHHHHHHHTTCCGGGEEE
T ss_pred EEECC---C----CC-chHHHHHHHHhCCCEEEECCCCCCccccccCCccccHHHHHHHHHHHHHHHHHHcCCChhhEEE
Confidence 11100 0 00 224567888999999999962 0 0122357778899997 887
Q ss_pred e
Q 020079 313 T 313 (331)
Q Consensus 313 ~ 313 (331)
|
T Consensus 193 D 193 (294)
T 2y5s_A 193 D 193 (294)
T ss_dssp E
T ss_pred e
Confidence 7
No 155
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=70.82 E-value=42 Score=28.28 Aligned_cols=20 Identities=10% Similarity=-0.067 Sum_probs=11.9
Q ss_pred HHHHHHHHHHhcCCCEEEEe
Q 020079 271 ATTRAIRLAEFVNTPLYVVH 290 (331)
Q Consensus 271 ~i~~~~~l~~~~g~~~~i~H 290 (331)
.+.+..+.+++.|+++.+..
T Consensus 142 ~l~~l~~~a~~~gv~l~lE~ 161 (301)
T 3cny_A 142 GLNHYGEIAAKYGLKVAYHH 161 (301)
T ss_dssp HHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHcCCEEEEec
Confidence 34556666666777665543
No 156
>1bxb_A Xylose isomerase; xylose metabolism; 2.20A {Thermus thermophilus} SCOP: c.1.15.3 PDB: 1bxc_A
Probab=70.37 E-value=59 Score=28.95 Aligned_cols=115 Identities=19% Similarity=0.120 Sum_probs=61.2
Q ss_pred HHHHHhCCCeEEEEEecCCCCcCC----HHHHHHHHHHHHHcCCcE-EEEcCCchhhHHHHHHHHHcC-CCCcccccccC
Q 020079 190 VMVKEKGINSFKFFMAYKGSFMIN----DELLIEGFKRCKSLGALA-MVHAENGDAVFEGQKRMIELG-ITGPEGHALSR 263 (331)
Q Consensus 190 ~~~~~~g~~~ik~~~~~~~~~~~~----~~~l~~~~~~A~~~g~~v-~~H~e~~~~~~~~~~~~~~~G-~~~~~~~~~~~ 263 (331)
+.+.+.|.+++.+....-.+...+ .+.++++.+.++++|+.+ .+|+.-..... + ..| +..+ .
T Consensus 40 ~~aa~~G~~~vEl~~~~~~p~~~~~~e~~~~~~~l~~~l~~~GL~i~~~~~~~~~~p~-----~-~~g~l~~~------d 107 (387)
T 1bxb_A 40 HKLAELGAYGVNLHDEDLIPRGTPPQERDQIVRRFKKALDETGLKVPMVTANLFSDPA-----F-KDGAFTSP------D 107 (387)
T ss_dssp HHHHHHTCSEEEEEHHHHSCTTCCTTHHHHHHHHHHHHHHHHTCBCCEEECCCSSSGG-----G-GGCSTTCS------S
T ss_pred HHHHHhCCCEEEecCcccCCCCCChhhhHHHHHHHHHHHHHhCCEEEEEecCCCCCcc-----c-cCCCCCCC------C
Confidence 333378999987651100111112 577888999999999998 46742110000 0 000 0000 0
Q ss_pred Ch--HHHHHHHHHHHHHHHhcCCCEEEEeCCC------------------HHHHH-HHHHHHHc--CCCEEEecCC
Q 020079 264 PP--LLEGEATTRAIRLAEFVNTPLYVVHVMS------------------MDAME-EIAKARKA--GPNFLNTTIP 316 (331)
Q Consensus 264 ~~--~~e~~~i~~~~~l~~~~g~~~~i~H~~~------------------~~~~~-~i~~~~~~--Gi~v~~~~~p 316 (331)
+. ......+++.+++++..|++..+.|... .+.+. ..+.+++. |+.+..+..|
T Consensus 108 ~~~r~~~i~~~~~~i~~A~~LGa~~vv~~~G~~g~~~~~~~~~~~~~~~~~e~L~~l~~~a~~~g~gv~l~lE~~~ 183 (387)
T 1bxb_A 108 PWVRAYALRKSLETMDLGAELGAEIYVVWPGREGAEVEATGKARKVWDWVREALNFMAAYAEDQGYGYRFALEPKP 183 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCEEEECCTTCEESCGGGCGGGTHHHHHHHHHHHHHHHHHHHTCCCEEEECCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCEEEECCCCCCccCCccCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCC
Confidence 00 1112456778888888898877777531 01222 23344555 7888877665
No 157
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=70.21 E-value=37 Score=29.13 Aligned_cols=97 Identities=18% Similarity=0.109 Sum_probs=56.5
Q ss_pred HhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHc---CCcEEEEcC--CchhhHHHHHHHHHcCCCCcccccc--cCChH
Q 020079 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAE--NGDAVFEGQKRMIELGITGPEGHAL--SRPPL 266 (331)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~---g~~v~~H~e--~~~~~~~~~~~~~~~G~~~~~~~~~--~~~~~ 266 (331)
+.|++++-+..+.......+.++-+++++.+.+. ..|+.+|+. +..+.-+..+...+.|..+--.... ..|.
T Consensus 33 ~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~- 111 (291)
T 3tak_A 33 EQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGTGANSTREAIELTKAAKDLGADAALLVTPYYNKPT- 111 (291)
T ss_dssp HHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCSSCCC-
T ss_pred HCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCC-
Confidence 6788887433222334566777777777766543 478888863 4444444446677778754221110 1222
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEeCC
Q 020079 267 LEGEATTRAIRLAEFVNTPLYVVHVM 292 (331)
Q Consensus 267 ~e~~~i~~~~~l~~~~g~~~~i~H~~ 292 (331)
+...++-+-.++...+.++.+-+++
T Consensus 112 -~~~l~~~f~~ia~a~~lPiilYn~P 136 (291)
T 3tak_A 112 -QEGLYQHYKAIAEAVELPLILYNVP 136 (291)
T ss_dssp -HHHHHHHHHHHHHHCCSCEEEEECH
T ss_pred -HHHHHHHHHHHHHhcCCCEEEEecc
Confidence 2233444556667778999888875
No 158
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=70.13 E-value=44 Score=27.41 Aligned_cols=35 Identities=9% Similarity=0.201 Sum_probs=23.4
Q ss_pred HhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEE-EEc
Q 020079 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAM-VHA 235 (331)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~-~H~ 235 (331)
+.|.+++.+.. +...+ .+++.+.++++|+.+. +|+
T Consensus 26 ~~G~~~vEl~~----~~~~~---~~~~~~~l~~~gl~~~~~~~ 61 (260)
T 1k77_A 26 KAGFDAVEFLF----PYNYS---TLQIQKQLEQNHLTLALFNT 61 (260)
T ss_dssp HHTCSEEECSC----CTTSC---HHHHHHHHHHTTCEEEEEEC
T ss_pred HhCCCEEEecC----CCCCC---HHHHHHHHHHcCCceEEEec
Confidence 67999886543 11223 5566777888999987 565
No 159
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=70.00 E-value=39 Score=29.34 Aligned_cols=97 Identities=13% Similarity=0.048 Sum_probs=55.8
Q ss_pred HhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHc---CCcEEEEcC--CchhhHHHHHHHHHcCCCCcccccc--cCChH
Q 020079 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAE--NGDAVFEGQKRMIELGITGPEGHAL--SRPPL 266 (331)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~---g~~v~~H~e--~~~~~~~~~~~~~~~G~~~~~~~~~--~~~~~ 266 (331)
+.|++++-+..+.......+.++-+++++.+.+. .+|+.+++. +..+.-+..+...+.|..+--.... ..|.
T Consensus 55 ~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~y~~~s- 133 (314)
T 3qze_A 55 QEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGTGANSTREAVALTEAAKSGGADACLLVTPYYNKPT- 133 (314)
T ss_dssp HHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCC-
T ss_pred HcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCC-
Confidence 6788887443333334566777777776665443 478888863 4444444446677777754221110 1222
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEeCC
Q 020079 267 LEGEATTRAIRLAEFVNTPLYVVHVM 292 (331)
Q Consensus 267 ~e~~~i~~~~~l~~~~g~~~~i~H~~ 292 (331)
+...++-+-.++...+.++.+-+++
T Consensus 134 -~~~l~~~f~~va~a~~lPiilYn~P 158 (314)
T 3qze_A 134 -QEGMYQHFRHIAEAVAIPQILYNVP 158 (314)
T ss_dssp -HHHHHHHHHHHHHHSCSCEEEEECH
T ss_pred -HHHHHHHHHHHHHhcCCCEEEEeCc
Confidence 2233444556667778898888875
No 160
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=69.95 E-value=29 Score=30.00 Aligned_cols=97 Identities=14% Similarity=0.075 Sum_probs=57.0
Q ss_pred HhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHc---CCcEEEEc--CCchhhHHHHHHHHHcCCCCcccccc--cCChH
Q 020079 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHA--ENGDAVFEGQKRMIELGITGPEGHAL--SRPPL 266 (331)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~---g~~v~~H~--e~~~~~~~~~~~~~~~G~~~~~~~~~--~~~~~ 266 (331)
+.|++++-+..+.......+.++-+++++.+.+. .+|+.+++ .+..+.-+..+...+.|..+--.... ..| .
T Consensus 47 ~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~-s 125 (304)
T 3l21_A 47 DQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGAGTYDTAHSIRLAKACAAEGAHGLLVVTPYYSKP-P 125 (304)
T ss_dssp HTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSCC-C
T ss_pred HcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCC-C
Confidence 6788887443332334567788877777766553 57899886 34444444446677778754221110 122 2
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEeCC
Q 020079 267 LEGEATTRAIRLAEFVNTPLYVVHVM 292 (331)
Q Consensus 267 ~e~~~i~~~~~l~~~~g~~~~i~H~~ 292 (331)
+...++-+-.++...+.++.+-+++
T Consensus 126 -~~~l~~~f~~va~a~~lPiilYn~P 150 (304)
T 3l21_A 126 -QRGLQAHFTAVADATELPMLLYDIP 150 (304)
T ss_dssp -HHHHHHHHHHHHTSCSSCEEEEECH
T ss_pred -HHHHHHHHHHHHHhcCCCEEEEeCc
Confidence 2233444556666678999888875
No 161
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=69.46 E-value=35 Score=29.25 Aligned_cols=110 Identities=11% Similarity=0.016 Sum_probs=62.6
Q ss_pred HhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHc---CCcEEEEc--CCchhhHHHHHHHHHcCCCCcccccc--cCChH
Q 020079 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHA--ENGDAVFEGQKRMIELGITGPEGHAL--SRPPL 266 (331)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~---g~~v~~H~--e~~~~~~~~~~~~~~~G~~~~~~~~~--~~~~~ 266 (331)
+.|++++-+..+.......+.++-+++++.+.+. .+|+.+|+ .+..+.-+..+...+.|..+--.... ..| .
T Consensus 34 ~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~-~ 112 (292)
T 3daq_A 34 ENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGTGTNDTEKSIQASIQAKALGADAIMLITPYYNKT-N 112 (292)
T ss_dssp HTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSCC-C
T ss_pred HcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHHcCCCEEEECCCCCCCC-C
Confidence 6899887543333334566777777777766543 57899996 34444444446677778754321110 122 2
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEeCCCH----HHHHHHHHHHH
Q 020079 267 LEGEATTRAIRLAEFVNTPLYVVHVMSM----DAMEEIAKARK 305 (331)
Q Consensus 267 ~e~~~i~~~~~l~~~~g~~~~i~H~~~~----~~~~~i~~~~~ 305 (331)
+...++-+-.++...+.++.+-+++.. -..+.+.++.+
T Consensus 113 -~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 154 (292)
T 3daq_A 113 -QRGLVKHFEAIADAVKLPVVLYNVPSRTNMTIEPETVEILSQ 154 (292)
T ss_dssp -HHHHHHHHHHHHHHHCSCEEEEECHHHHSCCCCHHHHHHHHT
T ss_pred -HHHHHHHHHHHHHhCCCCEEEEecccccCCCCCHHHHHHHhc
Confidence 223344455666667899999887632 12344555544
No 162
>4dzi_A Putative TIM-barrel metal-dependent hydrolase; amidohydrolase, bimetal binding site, enzyme FUNC initiative, EFI; HET: SO4; 1.60A {Mycobacterium avium subsp}
Probab=69.14 E-value=4.3 Score=37.22 Aligned_cols=57 Identities=12% Similarity=0.077 Sum_probs=43.2
Q ss_pred ChhhHHHHHHHHHHhCCCeEEEEEec----CCCCcCCHHHHHHHHHHHHHcCCcEEEEcCCc
Q 020079 181 DEVVSDEMEVMVKEKGINSFKFFMAY----KGSFMINDELLIEGFKRCKSLGALAMVHAENG 238 (331)
Q Consensus 181 ~~~~~~~~~~~~~~~g~~~ik~~~~~----~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~ 238 (331)
.+...++++++. +.|..++++...+ .+....+++.+..+++.+.++|++|.+|..+.
T Consensus 174 ~~~a~~EL~r~~-~~G~~Gv~l~p~~~~~~~g~~~l~d~~~~pl~~~~~elg~pV~iH~g~~ 234 (423)
T 4dzi_A 174 PTRAVEEVDFVL-ARGAKLVLVRPAPVPGLVKPRSLGDRSHDPVWARLAEAGVPVGFHLSDS 234 (423)
T ss_dssp HHHHHHHHHHHH-HTTCSCEECCSSCBCCSSSCBCTTCGGGHHHHHHHHHHTCCEEEECCCC
T ss_pred HHHHHHHHHHHH-HcCCeEEEEecCCCCCCCCCCCCCCccHHHHHHHHHhcCCeEEEeCCCC
Confidence 345678888888 5899999865322 12344567889999999999999999998543
No 163
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=68.69 E-value=52 Score=28.36 Aligned_cols=98 Identities=15% Similarity=0.114 Sum_probs=56.6
Q ss_pred HhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHc---CCcEEEEcC--CchhhHHHHHHHHHcCCCCccccc--ccCChH
Q 020079 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAE--NGDAVFEGQKRMIELGITGPEGHA--LSRPPL 266 (331)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~---g~~v~~H~e--~~~~~~~~~~~~~~~G~~~~~~~~--~~~~~~ 266 (331)
+.|++++-+..+.......+.++-+++++.+.+. .+|+.+++. +..+.-+..+...+.|..+--... ...|.
T Consensus 48 ~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y~~~~- 126 (304)
T 3cpr_A 48 DKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAGVGTNNTRTSVELAEAAASAGADGLLVVTPYYSKPS- 126 (304)
T ss_dssp HTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCSSCCC-
T ss_pred HcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEecCCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCC-
Confidence 6788887543333334567777777777766543 478888863 344444444567777875421111 01222
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEeCCC
Q 020079 267 LEGEATTRAIRLAEFVNTPLYVVHVMS 293 (331)
Q Consensus 267 ~e~~~i~~~~~l~~~~g~~~~i~H~~~ 293 (331)
+...++-+-.++...+.++.+-+++.
T Consensus 127 -~~~l~~~f~~ia~a~~lPiilYn~P~ 152 (304)
T 3cpr_A 127 -QEGLLAHFGAIAAATEVPICLYDIPG 152 (304)
T ss_dssp -HHHHHHHHHHHHHHCCSCEEEEECHH
T ss_pred -HHHHHHHHHHHHHhcCCCEEEEeCcc
Confidence 22334444566777788998888753
No 164
>1xim_A D-xylose isomerase; isomerase(intramolecular oxidoreductse); HET: XYL; 2.20A {Actinoplanes missouriensis} SCOP: c.1.15.3 PDB: 4xim_A 5xim_A* 6xim_A* 7xim_A 8xim_A* 9xim_A* 3xin_A 2xim_A* 5xin_A* 1xin_A* 1bhw_A* 2xin_A* 3xim_A*
Probab=67.85 E-value=57 Score=29.14 Aligned_cols=118 Identities=14% Similarity=0.081 Sum_probs=61.9
Q ss_pred HHHHHHHHhCCCeEEEEEecCCCCcCC----HHHHHHHHHHHHHcCCcEE-EEcCCchhhHHHHHHHHHcC-CCCccccc
Q 020079 187 EMEVMVKEKGINSFKFFMAYKGSFMIN----DELLIEGFKRCKSLGALAM-VHAENGDAVFEGQKRMIELG-ITGPEGHA 260 (331)
Q Consensus 187 ~~~~~~~~~g~~~ik~~~~~~~~~~~~----~~~l~~~~~~A~~~g~~v~-~H~e~~~~~~~~~~~~~~~G-~~~~~~~~ 260 (331)
.++.+. +.|.+++.+....-.+...+ .+.++++.+.++++|+.+. +|..-..... + ..| +..+
T Consensus 38 ~l~~aa-~~G~~~VEl~~~~l~p~~~~~~~~~~~~~~l~~~l~~~GL~i~~~~~~~f~~p~-----~-~~g~l~sp---- 106 (393)
T 1xim_A 38 AVHKLA-EIGAYGITFHDDDLVPFGSDAQTRDGIIAGFKKALDETGLIVPMVTTNLFTHPV-----F-KDGGFTSN---- 106 (393)
T ss_dssp HHHHHH-HHTCSEEECBHHHHSCTTCCHHHHHHHHHHHHHHHHHHTCBCCEEECCCSSSGG-----G-TTCSTTCS----
T ss_pred HHHHHH-HhCCCEEEeecccCCCccccccccHHHHHHHHHHHHHhCCEEEEEecCCcCCcc-----c-ccCCCCCC----
Confidence 333333 67998886541000122222 5678889999999999985 4542100000 0 000 0000
Q ss_pred ccCCh--HHHHHHHHHHHHHHHhcCCCEEEEeCCC------------------HHHHH-HHHHHHHc--CCCEEEecCCc
Q 020079 261 LSRPP--LLEGEATTRAIRLAEFVNTPLYVVHVMS------------------MDAME-EIAKARKA--GPNFLNTTIPL 317 (331)
Q Consensus 261 ~~~~~--~~e~~~i~~~~~l~~~~g~~~~i~H~~~------------------~~~~~-~i~~~~~~--Gi~v~~~~~p~ 317 (331)
.+. ......+++.++++...|++..+.|... .+.+. ..+.+++. |+.+..+..|.
T Consensus 107 --d~~~r~~~i~~~~~~i~~A~~LGa~~vv~~~G~~g~~~~~~~~~~~~~~~~~e~L~~l~~~A~~~g~gv~l~lE~~~~ 184 (393)
T 1xim_A 107 --DRSVRRYAIRKVLRQMDLGAELGAKTLVLWGGREGAEYDSAKDVSAALDRYREALNLLAQYSEDRGYGLRFAIEPKPN 184 (393)
T ss_dssp --SHHHHHHHHHHHHHHHHHHHHHTCCEEEEECTTSEESSGGGCCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCSS
T ss_pred --CHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCCCCCcCCccCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEecCCC
Confidence 000 1112456778888889998877777531 01222 23334555 78888877663
No 165
>3mcm_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/dihydropteroate...; folate, TIM barrel, synthase, HPPK, DHPS; 2.20A {Francisella tularensis subsp} PDB: 3mcn_A* 3mco_A*
Probab=67.80 E-value=62 Score=29.64 Aligned_cols=122 Identities=11% Similarity=0.059 Sum_probs=70.4
Q ss_pred ChhhHHHHHHHHHHhCCCeEEEEEecC--CCCcCC-HHHHHHH---HHHHHH------cCCcEEEEcCCchhhHHHHHHH
Q 020079 181 DEVVSDEMEVMVKEKGINSFKFFMAYK--GSFMIN-DELLIEG---FKRCKS------LGALAMVHAENGDAVFEGQKRM 248 (331)
Q Consensus 181 ~~~~~~~~~~~~~~~g~~~ik~~~~~~--~~~~~~-~~~l~~~---~~~A~~------~g~~v~~H~e~~~~~~~~~~~~ 248 (331)
.+...+..+++. +.|++.|.+..... +...++ +|+++++ ++..++ .++++.+=....+..+...+.+
T Consensus 211 ~~~al~~A~~mv-~~GAdIIDIGgeSTrPGa~~Vs~~EE~~Rv~pvI~~l~~~~~~~~~~vpISIDT~~~~VaeaAL~~~ 289 (442)
T 3mcm_A 211 DNQRKLNLDELI-QSGAEIIDIGAESTKPDAKPISIEEEFNKLNEFLEYFKSQLANLIYKPLVSIDTRKLEVMQKILAKH 289 (442)
T ss_dssp CCHHHHHHHHHH-HHTCSEEEEECCCCCC----CCHHHHHHHHHHHHHHHHHHTTTCSSCCEEEEECCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-HCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCeEEEeCCCHHHHHHHHhhC
Confidence 345666777777 78999887753211 111233 4666664 555554 3889988877776666554432
Q ss_pred HHcCCCC-cccccccCChHHHHHHHHHHHHHHHhcCCCEEEEeCCC-H-----------------HHHHHHHHHHHcCC-
Q 020079 249 IELGITG-PEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMS-M-----------------DAMEEIAKARKAGP- 308 (331)
Q Consensus 249 ~~~G~~~-~~~~~~~~~~~~e~~~i~~~~~l~~~~g~~~~i~H~~~-~-----------------~~~~~i~~~~~~Gi- 308 (331)
.|..- -... .. ....+.+.+++++|+++.+.|... . .-.+.++.++++||
T Consensus 290 --aGa~i~INDV---sg-----~~d~~m~~v~a~~g~~vVlMh~~G~P~tmq~~~y~dvv~ev~~~l~~~i~~a~~aGI~ 359 (442)
T 3mcm_A 290 --HDIIWMINDV---EC-----NNIEQKAQLIAKYNKKYVIIHNLGITDRNQYLDKENAIDNVCDYIEQKKQILLKHGIA 359 (442)
T ss_dssp --GGGCCEEEEC---CC-----TTHHHHHHHHHHHTCEEEEECC----------------CTHHHHHHHHHHHHHHHTCC
T ss_pred --CCCCEEEEcC---CC-----CCChHHHHHHHHhCCeEEEECCCCCCccccccCcccHHHHHHHHHHHHHHHHHHcCCC
Confidence 23221 1100 00 112456788889999999999642 1 11245788899999
Q ss_pred --CEEEe
Q 020079 309 --NFLNT 313 (331)
Q Consensus 309 --~v~~~ 313 (331)
+|..|
T Consensus 360 ~~~IilD 366 (442)
T 3mcm_A 360 QQNIYFD 366 (442)
T ss_dssp GGGEEEE
T ss_pred HHHEEEe
Confidence 47765
No 166
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=67.51 E-value=60 Score=27.97 Aligned_cols=109 Identities=7% Similarity=-0.113 Sum_probs=56.5
Q ss_pred CCCChhhHHHHHHHHHhCCceEEecCcCCCCC---cHHH---HHHHHHHHh-ccceeeccccccccCCChhhHHHHHHHH
Q 020079 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTA---GFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMV 192 (331)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (331)
+..+.+.+....+..+.+||..++-.+..+.. +..+ .++...+.. .+.++-.+ .+. ....+..+..+...
T Consensus 31 g~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaG--vg~-~~t~~ai~la~~a~ 107 (304)
T 3l21_A 31 GSLDTATAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAG--AGT-YDTAHSIRLAKACA 107 (304)
T ss_dssp SCBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEE--CCC-SCHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEe--CCC-CCHHHHHHHHHHHH
Confidence 34556677777778889999988765543332 2222 233333322 22222221 111 12233444444433
Q ss_pred HHhCCCeEEEEEecCCCCcCCHHHHHHH-HHHHHHcCCcEEEE
Q 020079 193 KEKGINSFKFFMAYKGSFMINDELLIEG-FKRCKSLGALAMVH 234 (331)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~-~~~A~~~g~~v~~H 234 (331)
+.|++++-+..-+- ...+++.+.+- -+.|...++|+.++
T Consensus 108 -~~Gadavlv~~P~y--~~~s~~~l~~~f~~va~a~~lPiilY 147 (304)
T 3l21_A 108 -AEGAHGLLVVTPYY--SKPPQRGLQAHFTAVADATELPMLLY 147 (304)
T ss_dssp -HHTCSEEEEECCCS--SCCCHHHHHHHHHHHHTSCSSCEEEE
T ss_pred -HcCCCEEEECCCCC--CCCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 68999876542211 12355555444 45556669999887
No 167
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=67.43 E-value=33 Score=28.61 Aligned_cols=41 Identities=10% Similarity=0.035 Sum_probs=26.4
Q ss_pred HHHHHHHhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEE-Ec
Q 020079 188 MEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMV-HA 235 (331)
Q Consensus 188 ~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~-H~ 235 (331)
..+.+.+.|.+++.+.. +.. ...+++.+.++++|+.+.. |+
T Consensus 28 ~l~~~~~~G~~~vEl~~----~~~---~~~~~~~~~l~~~gl~~~~~~~ 69 (269)
T 3ngf_A 28 RFRLAAEAGFGGVEFLF----PYD---FDADVIARELKQHNLTQVLFNM 69 (269)
T ss_dssp HHHHHHHTTCSEEECSC----CTT---SCHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHcCCCEEEecC----Ccc---CCHHHHHHHHHHcCCcEEEEec
Confidence 33334378999887642 111 2366777788889998874 74
No 168
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=67.40 E-value=60 Score=27.87 Aligned_cols=110 Identities=11% Similarity=-0.049 Sum_probs=57.9
Q ss_pred CCCChhhHHHHHHHHHhCCceEEecCcCCCCC---cHHH---HHHHHHHHh-ccceeeccccccccCCChhhHHHHHHHH
Q 020079 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTA---GFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMV 192 (331)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (331)
+..+.+.+....+..+.+|+..++-.++.+.. +..+ .++...+.. .+.++-. ..+. ....+..+..+...
T Consensus 23 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia--Gvg~-~~t~~ai~la~~a~ 99 (297)
T 3flu_A 23 GSIHYEQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIA--GTGA-NNTVEAIALSQAAE 99 (297)
T ss_dssp SCBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE--ECCC-SSHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEE--eCCC-cCHHHHHHHHHHHH
Confidence 34566677777778899999988865543322 2222 233333322 2222221 1111 12233444444443
Q ss_pred HHhCCCeEEEEEecCCCCcCCHHHHHH-HHHHHHHcCCcEEEEc
Q 020079 193 KEKGINSFKFFMAYKGSFMINDELLIE-GFKRCKSLGALAMVHA 235 (331)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~-~~~~A~~~g~~v~~H~ 235 (331)
+.|++++-+..-+ -...+++.+.+ .-+.|...++|+..+.
T Consensus 100 -~~Gadavlv~~P~--y~~~~~~~l~~~f~~va~a~~lPiilYn 140 (297)
T 3flu_A 100 -KAGADYTLSVVPY--YNKPSQEGIYQHFKTIAEATSIPMIIYN 140 (297)
T ss_dssp -HTTCSEEEEECCC--SSCCCHHHHHHHHHHHHHHCCSCEEEEE
T ss_pred -HcCCCEEEECCCC--CCCCCHHHHHHHHHHHHHhCCCCEEEEE
Confidence 6899988654221 11235555444 4456677799998873
No 169
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=67.34 E-value=32 Score=30.89 Aligned_cols=32 Identities=6% Similarity=0.122 Sum_probs=23.8
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEcCCchhhHH
Q 020079 212 INDELLIEGFKRCKSLGALAMVHAENGDAVFE 243 (331)
Q Consensus 212 ~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~ 243 (331)
.+.+.++.+.+.+++.|+++..=+-+...++.
T Consensus 98 l~~e~~~~L~~~~~~~Gi~~~stpfD~~svd~ 129 (385)
T 1vli_A 98 MPAEWILPLLDYCREKQVIFLSTVCDEGSADL 129 (385)
T ss_dssp SCGGGHHHHHHHHHHTTCEEECBCCSHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCcEEEccCCHHHHHH
Confidence 46788899999999999998766555554443
No 170
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=67.20 E-value=63 Score=28.04 Aligned_cols=110 Identities=9% Similarity=0.000 Sum_probs=56.8
Q ss_pred CCCChhhHHHHHHHHHhCCceEEecCcCCCCC---cHHH---HHHHHHHHh-ccceeeccccccccCCChhhHHHHHHHH
Q 020079 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTA---GFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMV 192 (331)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (331)
+..+.+.+....+..+.+||..++-.+..+.. +..+ .++...+.. .+.++-. ..+. ....+..+..+...
T Consensus 40 g~iD~~~l~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpVia--Gvg~-~~t~~ai~la~~A~ 116 (315)
T 3na8_A 40 GGLDLPALGRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIV--SVSD-LTTAKTVRRAQFAE 116 (315)
T ss_dssp SSBCHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEE--ECCC-SSHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE--ecCC-CCHHHHHHHHHHHH
Confidence 34556667777778889999988865543322 2222 333333322 2222211 1111 12233444444443
Q ss_pred HHhCCCeEEEEEecCCCCcCCHHHHHH-HHHHHHHcCCcEEEEc
Q 020079 193 KEKGINSFKFFMAYKGSFMINDELLIE-GFKRCKSLGALAMVHA 235 (331)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~-~~~~A~~~g~~v~~H~ 235 (331)
+.|++++-+..-+ -...+++.+.+ .-+.|+..++|+.++.
T Consensus 117 -~~Gadavlv~~P~--y~~~s~~~l~~~f~~va~a~~lPiilYn 157 (315)
T 3na8_A 117 -SLGAEAVMVLPIS--YWKLNEAEVFQHYRAVGEAIGVPVMLYN 157 (315)
T ss_dssp -HTTCSEEEECCCC--SSCCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred -hcCCCEEEECCCC--CCCCCHHHHHHHHHHHHHhCCCcEEEEe
Confidence 6899987553211 11235555444 4556677799998873
No 171
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=67.11 E-value=30 Score=28.54 Aligned_cols=65 Identities=15% Similarity=0.183 Sum_probs=42.2
Q ss_pred HHHHHHHHHhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEE-cCC-c--hhhHHHHHHHHHcCCC
Q 020079 186 DEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVH-AEN-G--DAVFEGQKRMIELGIT 254 (331)
Q Consensus 186 ~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H-~e~-~--~~~~~~~~~~~~~G~~ 254 (331)
++++.+. +.|++++.+.. -......+.+.++++++.|+ ++++..| +-+ . .......+.+.+.|+.
T Consensus 80 ~Di~~~~-~~GadGvV~G~-Lt~dg~iD~~~~~~Li~~a~--~~~vTFHRAFD~~~~~d~~~ale~L~~lGv~ 148 (224)
T 2bdq_A 80 EDILRAV-ELESDALVLGI-LTSNNHIDTEAIEQLLPATQ--GLPLVFHMAFDVIPKSDQKKSIDQLVALGFT 148 (224)
T ss_dssp HHHHHHH-HTTCSEEEECC-BCTTSSBCHHHHHHHHHHHT--TCCEEECGGGGGSCTTTHHHHHHHHHHTTCC
T ss_pred HHHHHHH-HcCCCEEEEee-ECCCCCcCHHHHHHHHHHhC--CCeEEEECchhccCCcCHHHHHHHHHHcCCC
Confidence 3343333 68999885421 12233578999999998876 8999999 532 2 3344556677788764
No 172
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=66.67 E-value=36 Score=29.58 Aligned_cols=108 Identities=11% Similarity=0.054 Sum_probs=59.5
Q ss_pred HhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHc---CCcEEEEcC--CchhhHHHHHHHHHcCCCCcccccc--cCChH
Q 020079 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAE--NGDAVFEGQKRMIELGITGPEGHAL--SRPPL 266 (331)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~---g~~v~~H~e--~~~~~~~~~~~~~~~G~~~~~~~~~--~~~~~ 266 (331)
+.|++++-+..+.......+.++-+++++.+.+. .+|+.+++. +..+.-+..+...+.|..+.-.... ..| .
T Consensus 56 ~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~-s 134 (315)
T 3na8_A 56 DGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVSDLTTAKTVRRAQFAESLGAEAVMVLPISYWKL-N 134 (315)
T ss_dssp HTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEECCCCSSCC-C
T ss_pred HcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCC-C
Confidence 6788877443232334566777777777666543 478888863 4444444445667777644211110 112 1
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEeCCCHH----HHHHHHHH
Q 020079 267 LEGEATTRAIRLAEFVNTPLYVVHVMSMD----AMEEIAKA 303 (331)
Q Consensus 267 ~e~~~i~~~~~l~~~~g~~~~i~H~~~~~----~~~~i~~~ 303 (331)
+...++-+-.++...+.++.+-+++... ..+.+.++
T Consensus 135 -~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~L 174 (315)
T 3na8_A 135 -EAEVFQHYRAVGEAIGVPVMLYNNPGTSGIDMSVELILRI 174 (315)
T ss_dssp -HHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHH
T ss_pred -HHHHHHHHHHHHHhCCCcEEEEeCcchhCcCCCHHHHHHH
Confidence 2233444556666778888888865311 23555555
No 173
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=66.49 E-value=61 Score=27.68 Aligned_cols=110 Identities=9% Similarity=-0.036 Sum_probs=57.2
Q ss_pred CCCChhhHHHHHHHHHhCCceEEecCcCCCCC---cHHH---HHHHHHHHh-ccceeeccccccccCCChhhHHHHHHHH
Q 020079 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTA---GFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMV 192 (331)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (331)
+..+.+.+....+..+.+|+..++-.++.+.. +..+ .++...+.. .+.++-. ..+. ....+..+..+...
T Consensus 17 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia--Gvg~-~~t~~ai~la~~a~ 93 (291)
T 3tak_A 17 GGVDWKSLEKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIA--GTGA-NSTREAIELTKAAK 93 (291)
T ss_dssp SCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE--ECCC-SSHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEE--eCCC-CCHHHHHHHHHHHH
Confidence 34556667777777889999988755544332 2222 333333322 2222211 1111 12233444444443
Q ss_pred HHhCCCeEEEEEecCCCCcCCHHHHHH-HHHHHHHcCCcEEEEc
Q 020079 193 KEKGINSFKFFMAYKGSFMINDELLIE-GFKRCKSLGALAMVHA 235 (331)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~-~~~~A~~~g~~v~~H~ 235 (331)
+.|++++-+..-+ -...+++.+.+ .-+.|...++|+..+.
T Consensus 94 -~~Gadavlv~~P~--y~~~~~~~l~~~f~~ia~a~~lPiilYn 134 (291)
T 3tak_A 94 -DLGADAALLVTPY--YNKPTQEGLYQHYKAIAEAVELPLILYN 134 (291)
T ss_dssp -HHTCSEEEEECCC--SSCCCHHHHHHHHHHHHHHCCSCEEEEE
T ss_pred -hcCCCEEEEcCCC--CCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 6899988554221 11235555444 4556677799999873
No 174
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=66.47 E-value=65 Score=27.96 Aligned_cols=110 Identities=9% Similarity=-0.052 Sum_probs=57.4
Q ss_pred CCCChhhHHHHHHHHHhCCceEEecCcCCCCC---cHHH---HHHHHHHHh-ccceeeccccccccCCChhhHHHHHHHH
Q 020079 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTA---GFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMV 192 (331)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (331)
+..+.+.+....+..+.+||..++-.++.+.. +..+ .++...+.. .+.++-. ..+. ....+..+..+...
T Consensus 38 g~iD~~~l~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpVia--Gvg~-~st~~ai~la~~A~ 114 (315)
T 3si9_A 38 GAIDEKAFCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVA--GAGS-NSTSEAVELAKHAE 114 (315)
T ss_dssp SCBCHHHHHHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEE--ECCC-SSHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEE--eCCC-CCHHHHHHHHHHHH
Confidence 34556667777778899999998866544332 2222 233333322 2222211 1111 12233444444433
Q ss_pred HHhCCCeEEEEEecCCCCcCCHHHHHH-HHHHHHHcCCcEEEEc
Q 020079 193 KEKGINSFKFFMAYKGSFMINDELLIE-GFKRCKSLGALAMVHA 235 (331)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~-~~~~A~~~g~~v~~H~ 235 (331)
+.|++++-+..-+- ...+++.+.+ ..+.|...++|+.++.
T Consensus 115 -~~Gadavlv~~P~y--~~~~~~~l~~~f~~va~a~~lPiilYn 155 (315)
T 3si9_A 115 -KAGADAVLVVTPYY--NRPNQRGLYTHFSSIAKAISIPIIIYN 155 (315)
T ss_dssp -HTTCSEEEEECCCS--SCCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred -hcCCCEEEECCCCC--CCCCHHHHHHHHHHHHHcCCCCEEEEe
Confidence 68999885542211 1235555444 4456666799998873
No 175
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=66.25 E-value=47 Score=28.46 Aligned_cols=97 Identities=10% Similarity=0.042 Sum_probs=54.6
Q ss_pred HhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHc---CCcEEEEcC--CchhhHHHHHHHHHcCCCCcccccc--cCChH
Q 020079 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAE--NGDAVFEGQKRMIELGITGPEGHAL--SRPPL 266 (331)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~---g~~v~~H~e--~~~~~~~~~~~~~~~G~~~~~~~~~--~~~~~ 266 (331)
+.|++++-+..+.......+.++-+++++.+.+. .+|+.+++. +..+.-+..+...+.|..+--.... ..| .
T Consensus 32 ~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~-s 110 (294)
T 2ehh_A 32 DNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTGGNATHEAVHLTAHAKEVGADGALVVVPYYNKP-T 110 (294)
T ss_dssp TTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCSSCC-C
T ss_pred HCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCC-C
Confidence 5788887443222334467777777777666543 478888863 3444444445667777754211100 122 1
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEeCC
Q 020079 267 LEGEATTRAIRLAEFVNTPLYVVHVM 292 (331)
Q Consensus 267 ~e~~~i~~~~~l~~~~g~~~~i~H~~ 292 (331)
+...++-+-.++...+.++.+-+++
T Consensus 111 -~~~l~~~f~~va~a~~lPiilYn~P 135 (294)
T 2ehh_A 111 -QRGLYEHFKTVAQEVDIPIIIYNIP 135 (294)
T ss_dssp -HHHHHHHHHHHHHHCCSCEEEEECH
T ss_pred -HHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 2233444446666778898888865
No 176
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=65.55 E-value=52 Score=28.12 Aligned_cols=102 Identities=13% Similarity=0.146 Sum_probs=58.1
Q ss_pred HHHHHHHhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHc---CCcEEEEcC--CchhhHHHHHHHHHcCCCCccccc--
Q 020079 188 MEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAE--NGDAVFEGQKRMIELGITGPEGHA-- 260 (331)
Q Consensus 188 ~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~---g~~v~~H~e--~~~~~~~~~~~~~~~G~~~~~~~~-- 260 (331)
++.+. +.|++++-+..+.......+.++-+++++.+.+. .+|+.+++. +..+.-+..+...+.|..+--...
T Consensus 27 v~~li-~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~ 105 (289)
T 2yxg_A 27 INFLI-ENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGAGSNCTEEAIELSVFAEDVGADAVLSITPY 105 (289)
T ss_dssp HHHHH-HTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred HHHHH-HCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCCC
Confidence 33344 6788887543332334567887777777766543 478988863 344444444566777875421111
Q ss_pred ccCChHHHHHHHHHHHHHHHhcCCCEEEEeCC
Q 020079 261 LSRPPLLEGEATTRAIRLAEFVNTPLYVVHVM 292 (331)
Q Consensus 261 ~~~~~~~e~~~i~~~~~l~~~~g~~~~i~H~~ 292 (331)
...|. +...++-+-.++...+.++.+-+++
T Consensus 106 y~~~s--~~~l~~~f~~ia~a~~lPiilYn~P 135 (289)
T 2yxg_A 106 YNKPT--QEGLRKHFGKVAESINLPIVLYNVP 135 (289)
T ss_dssp SSCCC--HHHHHHHHHHHHHHCSSCEEEEECH
T ss_pred CCCCC--HHHHHHHHHHHHHhcCCCEEEEeCc
Confidence 01222 1233444456677778999888865
No 177
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=65.53 E-value=45 Score=29.12 Aligned_cols=120 Identities=13% Similarity=0.016 Sum_probs=65.8
Q ss_pred hhhHHHHHHHHHHhCCCeEEEEEec--CCCCcCCHHHHHHH---HHHHHHc--CCcEEEEcCCchhhHHHHHHHHHcCCC
Q 020079 182 EVVSDEMEVMVKEKGINSFKFFMAY--KGSFMINDELLIEG---FKRCKSL--GALAMVHAENGDAVFEGQKRMIELGIT 254 (331)
Q Consensus 182 ~~~~~~~~~~~~~~g~~~ik~~~~~--~~~~~~~~~~l~~~---~~~A~~~--g~~v~~H~e~~~~~~~~~~~~~~~G~~ 254 (331)
+...+..+++. +.|++.|.+.... .+.....+|+++++ ++..++. ++++.+=..+.+..+... +.|..
T Consensus 65 ~~a~~~A~~~v-~~GAdIIDIGgeSTrPG~~v~~~eEl~Rv~pvI~~l~~~~~~vpISIDT~~~~VaeaAl----~aGa~ 139 (318)
T 2vp8_A 65 AAARDAVHRAV-ADGADVIDVGGVKAGPGERVDVDTEITRLVPFIEWLRGAYPDQLISVDTWRAQVAKAAC----AAGAD 139 (318)
T ss_dssp HHHHHHHHHHH-HTTCSEEEEC----------CHHHHHHHHHHHHHHHHHHSTTCEEEEECSCHHHHHHHH----HHTCC
T ss_pred HHHHHHHHHHH-HCCCCEEEECCCcCCCCCCCCHHHHHHHHHHHHHHHHhhCCCCeEEEeCCCHHHHHHHH----HhCCC
Confidence 44555666666 7899988764321 11222226666665 4444443 889988877666555443 23442
Q ss_pred CcccccccCChHHHHHHHHHHHHHHHhcCCCEEEEeCC-C-HH----------------------HHHHHHHHHHcCCC-
Q 020079 255 GPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVM-S-MD----------------------AMEEIAKARKAGPN- 309 (331)
Q Consensus 255 ~~~~~~~~~~~~~e~~~i~~~~~l~~~~g~~~~i~H~~-~-~~----------------------~~~~i~~~~~~Gi~- 309 (331)
--...... ...+.+.+++++|+++.+.|.. . .. -.+.++++.++|++
T Consensus 140 iINDVsg~--------~d~~m~~vaa~~g~~vVlmh~~G~~p~tmq~~~~y~~~~~dv~~ev~~~l~~~i~~a~~aGI~~ 211 (318)
T 2vp8_A 140 LINDTWGG--------VDPAMPEVAAEFGAGLVCAHTGGALPRTRPFRVSYGTTTRGVVDAVISQVTAAAERAVAAGVAR 211 (318)
T ss_dssp EEEETTSS--------SSTTHHHHHHHHTCEEEEECC-------------CCSCHHHHHHHHHHHHHHHHHHHHHTTCCG
T ss_pred EEEECCCC--------CchHHHHHHHHhCCCEEEECCCCCCccccccccccccccccHHHHHHHHHHHHHHHHHHcCCCh
Confidence 11110000 0224567788899999999963 1 11 11247778899995
Q ss_pred --EEEec
Q 020079 310 --FLNTT 314 (331)
Q Consensus 310 --v~~~~ 314 (331)
|..|.
T Consensus 212 ~~IilDP 218 (318)
T 2vp8_A 212 EKVLIDP 218 (318)
T ss_dssp GGEEEET
T ss_pred hhEEEcC
Confidence 88763
No 178
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=65.44 E-value=66 Score=27.65 Aligned_cols=110 Identities=8% Similarity=-0.068 Sum_probs=57.0
Q ss_pred CCCChhhHHHHHHHHHhCCceEEecCcCCCCC---cHHH---HHHHHHHHh-ccceeeccccccccCCChhhHHHHHHHH
Q 020079 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTA---GFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMV 192 (331)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (331)
+..+.+.+....+..+.+||..++-.++.+.. +..+ .++...+.. .+.++-. ..+. ....+..+..+...
T Consensus 20 g~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia--Gvg~-~~t~~ai~la~~a~ 96 (300)
T 3eb2_A 20 GRVRADVMGRLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVA--GVAS-TSVADAVAQAKLYE 96 (300)
T ss_dssp SCBCHHHHHHHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEE--EEEE-SSHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCCCCcEEE--eCCC-CCHHHHHHHHHHHH
Confidence 34556667777777889999888755443322 2222 233333322 2222211 1111 12234444444444
Q ss_pred HHhCCCeEEEEEecCCCCcCCHHHHHH-HHHHHHHcCCcEEEEc
Q 020079 193 KEKGINSFKFFMAYKGSFMINDELLIE-GFKRCKSLGALAMVHA 235 (331)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~-~~~~A~~~g~~v~~H~ 235 (331)
+.|++++-+..-+- ...+++.+.+ .-+.|...++|+.+..
T Consensus 97 -~~Gadavlv~~P~y--~~~~~~~l~~~f~~va~a~~lPiilYn 137 (300)
T 3eb2_A 97 -KLGADGILAILEAY--FPLKDAQIESYFRAIADAVEIPVVIYT 137 (300)
T ss_dssp -HHTCSEEEEEECCS--SCCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred -HcCCCEEEEcCCCC--CCCCHHHHHHHHHHHHHHCCCCEEEEE
Confidence 68999886543221 1235555544 4456677799998873
No 179
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=65.18 E-value=41 Score=29.26 Aligned_cols=116 Identities=16% Similarity=0.125 Sum_probs=63.0
Q ss_pred HhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHc---CCcEEEEcC--CchhhHHHHHHHHHcCCCCcccccc--cCChH
Q 020079 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAE--NGDAVFEGQKRMIELGITGPEGHAL--SRPPL 266 (331)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~---g~~v~~H~e--~~~~~~~~~~~~~~~G~~~~~~~~~--~~~~~ 266 (331)
+.|++++-+..+.......+.++-+++++.+.+. .+|+.+++. +..+.-+..+...+.|..+.-.... ..|.
T Consensus 54 ~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y~~~~- 132 (315)
T 3si9_A 54 TQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGAGSNSTSEAVELAKHAEKAGADAVLVVTPYYNRPN- 132 (315)
T ss_dssp HTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCC-
T ss_pred HcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCC-
Confidence 6788887433222334556777777777666543 578888863 4444444446677777754211110 1222
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEeCCCHH----HHHHHHHHHHcCCCEE
Q 020079 267 LEGEATTRAIRLAEFVNTPLYVVHVMSMD----AMEEIAKARKAGPNFL 311 (331)
Q Consensus 267 ~e~~~i~~~~~l~~~~g~~~~i~H~~~~~----~~~~i~~~~~~Gi~v~ 311 (331)
+...++-+-.++...+.++.+-+++... ..+.+.++.++--||.
T Consensus 133 -~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnIv 180 (315)
T 3si9_A 133 -QRGLYTHFSSIAKAISIPIIIYNIPSRSVIDMAVETMRDLCRDFKNII 180 (315)
T ss_dssp -HHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEE
T ss_pred -HHHHHHHHHHHHHcCCCCEEEEeCchhhCCCCCHHHHHHHHhhCCCEE
Confidence 1233444556666778898888875311 2344555544223543
No 180
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=65.13 E-value=69 Score=27.77 Aligned_cols=110 Identities=8% Similarity=-0.041 Sum_probs=56.4
Q ss_pred CCCChhhHHHHHHHHHhCCceEEecCcCCCCC---cHHH---HHHHHHHHh-ccceeeccccccccCCChhhHHHHHHHH
Q 020079 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTA---GFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMV 192 (331)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (331)
+..+.+.+....+..+.+||..++-.++.+.. +..+ .++...+.. .+.++-. ..+. ....+..+..+...
T Consensus 39 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpVia--Gvg~-~st~eai~la~~A~ 115 (314)
T 3qze_A 39 GRLDWDSLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIA--GTGA-NSTREAVALTEAAK 115 (314)
T ss_dssp SCBCHHHHHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEE--ECCC-SSHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE--eCCC-cCHHHHHHHHHHHH
Confidence 33556666667777889999988755443322 2222 233333322 2222211 1111 12234444444443
Q ss_pred HHhCCCeEEEEEecCCCCcCCHHHHHH-HHHHHHHcCCcEEEEc
Q 020079 193 KEKGINSFKFFMAYKGSFMINDELLIE-GFKRCKSLGALAMVHA 235 (331)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~-~~~~A~~~g~~v~~H~ 235 (331)
+.|++++-+..-+- ...+++.+.+ .-+.|...++|+.++.
T Consensus 116 -~~Gadavlv~~P~y--~~~s~~~l~~~f~~va~a~~lPiilYn 156 (314)
T 3qze_A 116 -SGGADACLLVTPYY--NKPTQEGMYQHFRHIAEAVAIPQILYN 156 (314)
T ss_dssp -HTTCSEEEEECCCS--SCCCHHHHHHHHHHHHHHSCSCEEEEE
T ss_pred -HcCCCEEEEcCCCC--CCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 68999876542211 1235555444 4456667799998873
No 181
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=65.10 E-value=53 Score=28.25 Aligned_cols=97 Identities=15% Similarity=0.150 Sum_probs=51.7
Q ss_pred HhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHc---CCcEEEEcC--CchhhHHHHHHHHHcCCCCccccc--ccCChH
Q 020079 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAE--NGDAVFEGQKRMIELGITGPEGHA--LSRPPL 266 (331)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~---g~~v~~H~e--~~~~~~~~~~~~~~~G~~~~~~~~--~~~~~~ 266 (331)
+.|++++-+..+.......+.++-+++++.+.+. .+|+.+++. +..+.-+..+...+.|..+--... ...|.
T Consensus 44 ~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s- 122 (301)
T 1xky_A 44 DNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTGSNNTHASIDLTKKATEVGVDAVMLVAPYYNKPS- 122 (301)
T ss_dssp HTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCSSCCC-
T ss_pred HcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeCCCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCC-
Confidence 5788877443222233456777776666665443 477888863 334444444556677765421100 01221
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEeCC
Q 020079 267 LEGEATTRAIRLAEFVNTPLYVVHVM 292 (331)
Q Consensus 267 ~e~~~i~~~~~l~~~~g~~~~i~H~~ 292 (331)
+...++-+-.++...+.++.+-+++
T Consensus 123 -~~~l~~~f~~va~a~~lPiilYn~P 147 (301)
T 1xky_A 123 -QEGMYQHFKAIAESTPLPVMLYNVP 147 (301)
T ss_dssp -HHHHHHHHHHHHHTCSSCEEEEECH
T ss_pred -HHHHHHHHHHHHHhcCCCEEEEeCc
Confidence 1223344445566667888887765
No 182
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=65.05 E-value=67 Score=27.60 Aligned_cols=108 Identities=7% Similarity=-0.063 Sum_probs=56.2
Q ss_pred CChhhHHHHHHHHHhCCceEEecCcCCCCC---cHHH---HHHHHHHHh-c-cceeeccccccccCCChhhHHHHHHHHH
Q 020079 122 ETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTA---GFEAYEKKA-K-NSCMDYGFHMAITKWDEVVSDEMEVMVK 193 (331)
Q Consensus 122 ~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~---~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (331)
.+.+.+....+..+.+||..++-.++.+.. +..+ .++...+.. . +.++-. ..+. ....+..+..+...
T Consensus 25 iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpvia--Gvg~-~~t~~ai~la~~a~- 100 (301)
T 3m5v_A 25 VDEQSYARLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLA--GAGS-NATHEAVGLAKFAK- 100 (301)
T ss_dssp ECHHHHHHHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEE--ECCC-SSHHHHHHHHHHHH-
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEE--eCCC-CCHHHHHHHHHHHH-
Confidence 455666677777889999998866544332 2222 233333322 2 222221 1111 12233444444443
Q ss_pred HhCCCeEEEEEecCCCCcCCHHHHHH-HHHHHHHcCCcEEEEc
Q 020079 194 EKGINSFKFFMAYKGSFMINDELLIE-GFKRCKSLGALAMVHA 235 (331)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~-~~~~A~~~g~~v~~H~ 235 (331)
+.|++++-+..-+- ...+++.+.+ ..+.|...++|+..+.
T Consensus 101 ~~Gadavlv~~P~y--~~~s~~~l~~~f~~va~a~~lPiilYn 141 (301)
T 3m5v_A 101 EHGADGILSVAPYY--NKPTQQGLYEHYKAIAQSVDIPVLLYN 141 (301)
T ss_dssp HTTCSEEEEECCCS--SCCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred HcCCCEEEEcCCCC--CCCCHHHHHHHHHHHHHhCCCCEEEEe
Confidence 68999886542211 1235555444 4456677799998873
No 183
>1muw_A Xylose isomerase; atomic resolution, disorder; 0.86A {Streptomyces olivochromogenes} SCOP: c.1.15.3 PDB: 1s5m_A* 1s5n_A* 2gyi_A* 1xyb_A* 1xyc_A* 1xya_A* 1xyl_A 1xym_A* 1dxi_A 3gnx_A* 1gw9_A* 1xib_A 1xic_A* 1xid_A* 1xie_A* 1xif_A* 1xig_A* 1xih_A* 1xii_A* 1xij_A ...
Probab=64.84 E-value=76 Score=28.19 Aligned_cols=48 Identities=10% Similarity=0.069 Sum_probs=30.3
Q ss_pred HHHHHHHHHhCCCeEEEEEecCCCCcCC----HHHHHHHHHHHHHcCCcEEEE
Q 020079 186 DEMEVMVKEKGINSFKFFMAYKGSFMIN----DELLIEGFKRCKSLGALAMVH 234 (331)
Q Consensus 186 ~~~~~~~~~~g~~~ik~~~~~~~~~~~~----~~~l~~~~~~A~~~g~~v~~H 234 (331)
+.++.+. +.|.+++.++.....+.... .+.++++.+.++++|+.+..+
T Consensus 37 e~l~~aa-~~G~~~VEl~~~~~~p~~~~~~~~~~~~~~l~~~l~~~GL~i~~~ 88 (386)
T 1muw_A 37 ETVQRLA-ELGAHGVTFHDDDLIPFGSSDTERESHIKRFRQALDATGMTVPMA 88 (386)
T ss_dssp HHHHHHH-HHTCCEEEEEHHHHSCTTCCHHHHHHHHHHHHHHHHHHTCBCCEE
T ss_pred HHHHHHH-HcCCCEEEeeCCCCCcccCcccccHHHHHHHHHHHHHhCCeEEEE
Confidence 3344444 78999987754211111111 467888889999999998766
No 184
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=64.51 E-value=68 Score=27.53 Aligned_cols=70 Identities=9% Similarity=-0.145 Sum_probs=41.4
Q ss_pred hhHHHHHHHHHHhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHc--CCcEEEEcCCchhhHHH-HHHHHHcCCCC
Q 020079 183 VVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL--GALAMVHAENGDAVFEG-QKRMIELGITG 255 (331)
Q Consensus 183 ~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~--g~~v~~H~e~~~~~~~~-~~~~~~~G~~~ 255 (331)
+...++.+.+.+.|++.+.+. +.++. ..++...++++..++. ++++.+|+.+....... .....+.|...
T Consensus 159 ~~~~~~~~~~~~~G~d~i~l~-DT~G~--~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla~An~laAv~aGa~~ 231 (302)
T 2ftp_A 159 RQVAWVARELQQMGCYEVSLG-DTIGV--GTAGATRRLIEAVASEVPRERLAGHFHDTYGQALANIYASLLEGIAV 231 (302)
T ss_dssp HHHHHHHHHHHHTTCSEEEEE-ESSSC--CCHHHHHHHHHHHTTTSCGGGEEEEEBCTTSCHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHHHHcCCCEEEEe-CCCCC--cCHHHHHHHHHHHHHhCCCCeEEEEeCCCccHHHHHHHHHHHhCCCE
Confidence 333333333337899987654 44443 4677877777776554 57899998665543332 23345566643
No 185
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=64.35 E-value=60 Score=28.63 Aligned_cols=98 Identities=15% Similarity=0.170 Sum_probs=56.9
Q ss_pred HhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEcC--CchhhHHHHHHHHHcCCCCccccc--ccCChHHHH
Q 020079 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAE--NGDAVFEGQKRMIELGITGPEGHA--LSRPPLLEG 269 (331)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e--~~~~~~~~~~~~~~~G~~~~~~~~--~~~~~~~e~ 269 (331)
+.|++++-+..+.......+.++-+++++.+....+|+.+++. +..+.-+..+...+.|..+.-... ...++. +.
T Consensus 58 ~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~y~~~~s-~~ 136 (344)
T 2hmc_A 58 ADGMSAVVYCGSMGDWPLLTDEQRMEGVERLVKAGIPVIVGTGAVNTASAVAHAVHAQKVGAKGLMVIPRVLSRGSV-IA 136 (344)
T ss_dssp HTTCCCEEESSGGGTGGGSCHHHHHHHHHHHHHTTCCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCCSSSTTC-HH
T ss_pred HcCCCEEEeCccCcChhhCCHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCccCCCCC-HH
Confidence 6788887543333334567888888888875455689999963 334444444566777775421111 012012 22
Q ss_pred HHHHHHHHHHH-hcCCCEEEEeCC
Q 020079 270 EATTRAIRLAE-FVNTPLYVVHVM 292 (331)
Q Consensus 270 ~~i~~~~~l~~-~~g~~~~i~H~~ 292 (331)
..++-+-.++. ..+.++.+-+++
T Consensus 137 ~l~~~f~~IA~aa~~lPiilYn~P 160 (344)
T 2hmc_A 137 AQKAHFKAILSAAPEIPAVIYNSP 160 (344)
T ss_dssp HHHHHHHHHHHHSTTSCEEEEEBG
T ss_pred HHHHHHHHHHhhCCCCcEEEEecC
Confidence 23334445566 568899888876
No 186
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=64.05 E-value=78 Score=28.00 Aligned_cols=63 Identities=13% Similarity=0.005 Sum_probs=40.3
Q ss_pred hhhHHHHHHHHHHhCCCeEEEEEec-CCC----CcCCHHHHHHHHHHHHHcCCcEEEEcCCchhhHHH
Q 020079 182 EVVSDEMEVMVKEKGINSFKFFMAY-KGS----FMINDELLIEGFKRCKSLGALAMVHAENGDAVFEG 244 (331)
Q Consensus 182 ~~~~~~~~~~~~~~g~~~ik~~~~~-~~~----~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~ 244 (331)
.+...++.+.+++.|++.+|.+.-. ... .....+.++.+.+.+++.|+++..=..+...++..
T Consensus 119 ~e~a~~~a~~~k~aGa~~vr~q~fKprTs~~~f~glg~egl~~l~~~~~e~Gl~~~te~~d~~~~~~l 186 (350)
T 1vr6_A 119 REMLMETAHFLSELGVKVLRGGAYKPRTSPYSFQGLGEKGLEYLREAADKYGMYVVTEALGEDDLPKV 186 (350)
T ss_dssp HHHHHHHHHHHHHTTCCEEECBSCCCCCSTTSCCCCTHHHHHHHHHHHHHHTCEEEEECSSGGGHHHH
T ss_pred HHHHHHHHHHHHHcCCCeeeeeEEeCCCChHhhcCCCHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHH
Confidence 3344444444447888887764321 111 11247889999999999999998877666655544
No 187
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=63.48 E-value=58 Score=28.16 Aligned_cols=115 Identities=14% Similarity=0.121 Sum_probs=65.8
Q ss_pred HhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHc---CCcEEEEc--CCchhhHHHHHHHHHcCCCCc----ccccc-cC
Q 020079 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHA--ENGDAVFEGQKRMIELGITGP----EGHAL-SR 263 (331)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~---g~~v~~H~--e~~~~~~~~~~~~~~~G~~~~----~~~~~-~~ 263 (331)
+.|++++-+..+.......+.++-+++++.+.+. .+|+.+++ .+..+.-+..+...+.|..+. ..+.. ..
T Consensus 40 ~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~Pyy~~~~~ 119 (309)
T 3fkr_A 40 DAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVTTSHYSTQVCAARSLRAQQLGAAMVMAMPPYHGATFR 119 (309)
T ss_dssp HTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEECCSCBTTTBC
T ss_pred HcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEecCCchHHHHHHHHHHHHHcCCCEEEEcCCCCccCCC
Confidence 6899887553333334567888877777766554 57899996 344444444566778887542 12210 12
Q ss_pred ChHHHHHHHHHHHHHHHhcCCCEEEEeCCCH---HHHHHHHHHHHcCCCE
Q 020079 264 PPLLEGEATTRAIRLAEFVNTPLYVVHVMSM---DAMEEIAKARKAGPNF 310 (331)
Q Consensus 264 ~~~~e~~~i~~~~~l~~~~g~~~~i~H~~~~---~~~~~i~~~~~~Gi~v 310 (331)
|. +...++-+-.++...+.++.+-+++.. -..+.+.++.+.--||
T Consensus 120 ~s--~~~l~~~f~~va~a~~lPiilYn~P~tg~~l~~~~~~~La~~~pnI 167 (309)
T 3fkr_A 120 VP--EAQIFEFYARVSDAIAIPIMVQDAPASGTALSAPFLARMAREIEQV 167 (309)
T ss_dssp CC--HHHHHHHHHHHHHHCSSCEEEEECGGGCCCCCHHHHHHHHHHSTTE
T ss_pred CC--HHHHHHHHHHHHHhcCCCEEEEeCCCCCCCCCHHHHHHHHhhCCCE
Confidence 22 223344455667777899988887521 1235555554433344
No 188
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=63.31 E-value=55 Score=28.01 Aligned_cols=102 Identities=14% Similarity=0.037 Sum_probs=56.0
Q ss_pred HHHHHHH-hCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHc---CCcEEEEcC--CchhhHHHHHHHHHcCCCCcccccc
Q 020079 188 MEVMVKE-KGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAE--NGDAVFEGQKRMIELGITGPEGHAL 261 (331)
Q Consensus 188 ~~~~~~~-~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~---g~~v~~H~e--~~~~~~~~~~~~~~~G~~~~~~~~~ 261 (331)
++.+. + .|++++-+..+.......+.++-+++++.+.+. .+|+.+++. +..+.-+..+...+.|..+--....
T Consensus 30 v~~li-~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 108 (293)
T 1f6k_A 30 IRHNI-DKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQVGSVNLKEAVELGKYATELGYDCLSAVTP 108 (293)
T ss_dssp HHHHH-HTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHH-hhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 33344 6 788887543333334567777777776665542 478888863 3444444445567777654211100
Q ss_pred --cCChHHHHHHHHHHHHHHHhcCCCEEEEeCC
Q 020079 262 --SRPPLLEGEATTRAIRLAEFVNTPLYVVHVM 292 (331)
Q Consensus 262 --~~~~~~e~~~i~~~~~l~~~~g~~~~i~H~~ 292 (331)
..|. +...++-+-.++...+.++.+-+++
T Consensus 109 ~y~~~~--~~~l~~~f~~va~a~~lPiilYn~P 139 (293)
T 1f6k_A 109 FYYKFS--FPEIKHYYDTIIAETGSNMIVYSIP 139 (293)
T ss_dssp CSSCCC--HHHHHHHHHHHHHHHCCCEEEEECH
T ss_pred CCCCCC--HHHHHHHHHHHHHhCCCCEEEEECc
Confidence 1222 2233344445666668888888865
No 189
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=63.28 E-value=64 Score=26.74 Aligned_cols=127 Identities=17% Similarity=0.038 Sum_probs=69.4
Q ss_pred CCCChhhHHHHHHHHHhCCceEEecCcCCCCCcHHHHHHHHHHH-hccceeeccccccccCCChhhHHHHHHHHHHhCCC
Q 020079 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKK-AKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGIN 198 (331)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 198 (331)
...+.+++....+.+..+|+.+++-.. ......+.+... ..+...-.+|+.+.. ..+....++++.+ +.|++
T Consensus 31 p~~t~~~i~~l~~~a~~~~~~aVcv~p-----~~v~a~~~l~~~~~v~v~tvigFP~G~~-~~~~k~~e~~~Av-~~GAd 103 (234)
T 1n7k_A 31 PRATEEDVRNLVREASDYGFRCAVLTP-----VYTVKISGLAEKLGVKLCSVIGFPLGQA-PLEVKLVEAQTVL-EAGAT 103 (234)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEECH-----HHHHHHHHHHHHHTCCEEEEESTTTCCS-CHHHHHHHHHHHH-HHTCC
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEEch-----HHheeehHhCCCCCceEEEEeCCCCCCC-cHHHHHHHHHHHH-HcCCC
Confidence 345788888889999999999987321 112111222221 111111122322221 2233456677777 78999
Q ss_pred eEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEcCC----chhhHHHHHHHHHcCC
Q 020079 199 SFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAEN----GDAVFEGQKRMIELGI 253 (331)
Q Consensus 199 ~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~----~~~~~~~~~~~~~~G~ 253 (331)
.+...++.......-.+++.++.+.++++|+++-+=.|. ++++....+...+.|.
T Consensus 104 EID~vinig~~~~~v~~ei~~v~~a~~~~g~~lKvIlEt~~L~~e~i~~a~ria~eaGA 162 (234)
T 1n7k_A 104 ELDVVPHLSLGPEAVYREVSGIVKLAKSYGAVVKVILEAPLWDDKTLSLLVDSSRRAGA 162 (234)
T ss_dssp EEEECCCGGGCHHHHHHHHHHHHHHHHHTTCEEEEECCGGGSCHHHHHHHHHHHHHTTC
T ss_pred EEEEeccchHHHHHHHHHHHHHHHHHhhcCCeEEEEEeccCCCHHHHHHHHHHHHHhCC
Confidence 998776654332222456777888888888886444443 2333333344455554
No 190
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=62.60 E-value=60 Score=27.98 Aligned_cols=97 Identities=8% Similarity=0.002 Sum_probs=51.7
Q ss_pred HhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHc---CCcEEEEcC--CchhhHHHHHHHHHcCCCCccccc--ccCChH
Q 020079 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAE--NGDAVFEGQKRMIELGITGPEGHA--LSRPPL 266 (331)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~---g~~v~~H~e--~~~~~~~~~~~~~~~G~~~~~~~~--~~~~~~ 266 (331)
+.|++++-+..+.......+.++-+++++.+.+. .+|+.+++. +..+.-+..+...+.|..+--... ...|.
T Consensus 43 ~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s- 121 (303)
T 2wkj_A 43 QQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTPFYYPFS- 121 (303)
T ss_dssp HTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCSSCCC-
T ss_pred HcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhCCCCEEEecCCCCCCCC-
Confidence 5788877443222334456777777766665543 578888863 334443444556677765421110 01221
Q ss_pred HHHHHHHHHHHHHHhcC-CCEEEEeCC
Q 020079 267 LEGEATTRAIRLAEFVN-TPLYVVHVM 292 (331)
Q Consensus 267 ~e~~~i~~~~~l~~~~g-~~~~i~H~~ 292 (331)
+...++-+-.++...+ .++.+-+++
T Consensus 122 -~~~l~~~f~~va~a~~~lPiilYn~P 147 (303)
T 2wkj_A 122 -FEEHCDHYRAIIDSADGLPMVVYNIP 147 (303)
T ss_dssp -HHHHHHHHHHHHHHHTTCCEEEEECH
T ss_pred -HHHHHHHHHHHHHhCCCCCEEEEeCc
Confidence 1122333445566666 888887765
No 191
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=62.10 E-value=80 Score=27.46 Aligned_cols=120 Identities=18% Similarity=0.172 Sum_probs=66.6
Q ss_pred hhhHHHHHHHHHHhCCCeEEEEEecCCCC------cC-CHHHHHH---HHHHHHH-cCCcEEEEcCCchhhHHHHHHHHH
Q 020079 182 EVVSDEMEVMVKEKGINSFKFFMAYKGSF------MI-NDELLIE---GFKRCKS-LGALAMVHAENGDAVFEGQKRMIE 250 (331)
Q Consensus 182 ~~~~~~~~~~~~~~g~~~ik~~~~~~~~~------~~-~~~~l~~---~~~~A~~-~g~~v~~H~e~~~~~~~~~~~~~~ 250 (331)
+...+..+++. +.|++.|.+......+. .+ .+|++++ +++..++ .++|+.+=...++..+...+
T Consensus 49 ~~al~~A~~~v-~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv~pvI~~l~~~~~vpISIDT~~~~Va~aAl~---- 123 (314)
T 3tr9_A 49 NSALRTAEKMV-DEGADILDIGGEATNPFVDIKTDSPSTQIELDRLLPVIDAIKKRFPQLISVDTSRPRVMREAVN---- 123 (314)
T ss_dssp HHHHHHHHHHH-HTTCSEEEEECCCSCTTC-----CHHHHHHHHHHHHHHHHHHHHCCSEEEEECSCHHHHHHHHH----
T ss_pred HHHHHHHHHHH-HCCCCEEEECCCCCCCCcccccCCCCHHHHHHHHHHHHHHHHhhCCCeEEEeCCCHHHHHHHHH----
Confidence 34455566666 68998887653221111 11 2455443 3444333 48898888776665554432
Q ss_pred cCCCCcccccccCChHHHHHHHHHHHHHHHhcCCCEEEEeCCC------------------HHHHHHHHHHHHcCCC---
Q 020079 251 LGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMS------------------MDAMEEIAKARKAGPN--- 309 (331)
Q Consensus 251 ~G~~~~~~~~~~~~~~~e~~~i~~~~~l~~~~g~~~~i~H~~~------------------~~~~~~i~~~~~~Gi~--- 309 (331)
.|..--.... . ...++.+.+++++|+++.+.|... ..-.+.++.++++||+
T Consensus 124 aGa~iINDVs---g-----~~~~~m~~v~a~~g~~vVlMh~~G~P~tmq~~~~ydvv~ev~~~l~~~i~~a~~~GI~~~~ 195 (314)
T 3tr9_A 124 TGADMINDQR---A-----LQLDDALTTVSALKTPVCLMHFPSETRKPGSTTHFYFLQSVKKELQESIQRCKKAGISEDR 195 (314)
T ss_dssp HTCCEEEETT---T-----TCSTTHHHHHHHHTCCEEEECCCCTTCCTTSSCHHHHHHHHHHHHHHHHHHHHHTTCCGGG
T ss_pred cCCCEEEECC---C-----CCchHHHHHHHHhCCeEEEECCCCCCcccccccccchHHHHHHHHHHHHHHHHHcCCCHhH
Confidence 3532111100 0 001245678888999999999641 1122467788999995
Q ss_pred EEEec
Q 020079 310 FLNTT 314 (331)
Q Consensus 310 v~~~~ 314 (331)
|..|.
T Consensus 196 IilDP 200 (314)
T 3tr9_A 196 IIIDP 200 (314)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 88663
No 192
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=62.07 E-value=57 Score=27.93 Aligned_cols=104 Identities=5% Similarity=-0.057 Sum_probs=60.5
Q ss_pred HHHHHHHHHHhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHc---CCcEEEEcC--CchhhHHHHHHHHHcCCCCcc--
Q 020079 185 SDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAE--NGDAVFEGQKRMIELGITGPE-- 257 (331)
Q Consensus 185 ~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~---g~~v~~H~e--~~~~~~~~~~~~~~~G~~~~~-- 257 (331)
++.+.+..-+.|++++-+..+.......+.++-+++++.+.+. .+|+.+++. +..+.-+..+...+.|..+--
T Consensus 26 l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~ 105 (294)
T 3b4u_A 26 MIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVLVDSIEDAADQSAEALNAGARNILLA 105 (294)
T ss_dssp HHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEECCSSHHHHHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCccHHHHHHHHHHHHhcCCCEEEEc
Confidence 3333333326788887543332334567888888888877664 368888863 444444444567777875421
Q ss_pred --cccccC-ChHHHHHHHHHHHHHHHhc---CCCEEEEeCC
Q 020079 258 --GHALSR-PPLLEGEATTRAIRLAEFV---NTPLYVVHVM 292 (331)
Q Consensus 258 --~~~~~~-~~~~e~~~i~~~~~l~~~~---g~~~~i~H~~ 292 (331)
.+. . |. +...++-+-.++... +.++.+-+++
T Consensus 106 ~P~y~--~~~s--~~~l~~~f~~va~a~p~~~lPiilYn~P 142 (294)
T 3b4u_A 106 PPSYF--KNVS--DDGLFAWFSAVFSKIGKDARDILVYNIP 142 (294)
T ss_dssp CCCSS--CSCC--HHHHHHHHHHHHHHHCTTCCCEEEEECH
T ss_pred CCcCC--CCCC--HHHHHHHHHHHHHhcCCCCCcEEEEECc
Confidence 221 2 21 223344444566666 8899888875
No 193
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=62.04 E-value=56 Score=28.61 Aligned_cols=99 Identities=11% Similarity=0.005 Sum_probs=57.8
Q ss_pred HHHHHHhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHc---CCcEEEEcC--CchhhHHHHHHHHHcCCCCc----ccc
Q 020079 189 EVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAE--NGDAVFEGQKRMIELGITGP----EGH 259 (331)
Q Consensus 189 ~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~---g~~v~~H~e--~~~~~~~~~~~~~~~G~~~~----~~~ 259 (331)
+.+. +.|++++-+..+.......+.++-+++++.+.+. .+|+.+++. +..+.-+..+...+.|..+- ..+
T Consensus 62 ~~li-~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~Y 140 (332)
T 2r8w_A 62 ARLD-AAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGIGALRTDEAVALAKDAEAAGADALLLAPVSY 140 (332)
T ss_dssp HHHH-HHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECCSSHHHHHHHHHHHHHHTCSEEEECCCCS
T ss_pred HHHH-HcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCC
Confidence 3344 6799887543333334567888877777766543 478888863 44444444456677777542 112
Q ss_pred cccCChHHHHHHHHHHHHHHHhcCCCEEEEeCC
Q 020079 260 ALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVM 292 (331)
Q Consensus 260 ~~~~~~~~e~~~i~~~~~l~~~~g~~~~i~H~~ 292 (331)
. .|.. ...++-+-.++...+.++.+-+++
T Consensus 141 ~--~~s~--~~l~~~f~~VA~a~~lPiilYn~P 169 (332)
T 2r8w_A 141 T--PLTQ--EEAYHHFAAVAGATALPLAIYNNP 169 (332)
T ss_dssp S--CCCH--HHHHHHHHHHHHHCSSCEEEECCH
T ss_pred C--CCCH--HHHHHHHHHHHHhcCCCEEEEeCc
Confidence 1 2222 233444446677778999888865
No 194
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=61.60 E-value=72 Score=27.28 Aligned_cols=70 Identities=10% Similarity=0.044 Sum_probs=41.0
Q ss_pred hhhHHHHHHHHHHhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHc--CCcEEEEcCCchhhHHHH-HHHHHcCCC
Q 020079 182 EVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL--GALAMVHAENGDAVFEGQ-KRMIELGIT 254 (331)
Q Consensus 182 ~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~--g~~v~~H~e~~~~~~~~~-~~~~~~G~~ 254 (331)
.+...++.+.+.+.|++.+.+. +..+ ..+++.+.++++..++. ++++.+|+.+........ ....+.|..
T Consensus 155 ~~~~~~~~~~~~~~Ga~~i~l~-DT~G--~~~P~~~~~lv~~l~~~~~~~~i~~H~Hn~~Gla~An~laA~~aGa~ 227 (298)
T 2cw6_A 155 PAKVAEVTKKFYSMGCYEISLG-DTIG--VGTPGIMKDMLSAVMQEVPLAALAVHCHDTYGQALANTLMALQMGVS 227 (298)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEE-ETTS--CCCHHHHHHHHHHHHHHSCGGGEEEEEBCTTSCHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHcCCCEEEec-CCCC--CcCHHHHHHHHHHHHHhCCCCeEEEEECCCCchHHHHHHHHHHhCCC
Confidence 3444444444447899887654 3222 35788888888777654 478999987765543221 223445553
No 195
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=61.51 E-value=81 Score=27.58 Aligned_cols=109 Identities=9% Similarity=-0.120 Sum_probs=56.4
Q ss_pred CCCChhhHHHHHHHHHhCCceEEecCcCCCCC---cHH---HHHHHHHHHh-ccceeeccccccccC-CChhhHHHHHHH
Q 020079 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLT---AGFEAYEKKA-KNSCMDYGFHMAITK-WDEVVSDEMEVM 191 (331)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 191 (331)
+..+.+.+....+..+.+||..++-.+..+.. +.. +.++...+.. .+.++-. +... ...+..+..+..
T Consensus 50 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpVia----Gvg~~st~eai~la~~A 125 (332)
T 2r8w_A 50 GRVDIEAFSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMA----GIGALRTDEAVALAKDA 125 (332)
T ss_dssp CCBCHHHHHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEE----EECCSSHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE----ecCCCCHHHHHHHHHHH
Confidence 34556667677777888999988755443322 222 2333333322 2222221 1211 223344444433
Q ss_pred HHHhCCCeEEEEEecCCCCcCCHHHHHH-HHHHHHHcCCcEEEEc
Q 020079 192 VKEKGINSFKFFMAYKGSFMINDELLIE-GFKRCKSLGALAMVHA 235 (331)
Q Consensus 192 ~~~~g~~~ik~~~~~~~~~~~~~~~l~~-~~~~A~~~g~~v~~H~ 235 (331)
. +.|++++-+.. | .-...+++.+.+ .-+.|...++|+.++.
T Consensus 126 ~-~~Gadavlv~~-P-~Y~~~s~~~l~~~f~~VA~a~~lPiilYn 167 (332)
T 2r8w_A 126 E-AAGADALLLAP-V-SYTPLTQEEAYHHFAAVAGATALPLAIYN 167 (332)
T ss_dssp H-HHTCSEEEECC-C-CSSCCCHHHHHHHHHHHHHHCSSCEEEEC
T ss_pred H-hcCCCEEEECC-C-CCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 3 67999875432 1 112235565554 4455677789998873
No 196
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=61.33 E-value=77 Score=27.02 Aligned_cols=108 Identities=10% Similarity=-0.060 Sum_probs=54.5
Q ss_pred CChhhHHHHHHHHHhCCceEEecCcCCCCC---cHHH---HHHHHHHHh-ccceeeccccccccCCChhhHHHHHHHHHH
Q 020079 122 ETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTA---GFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMVKE 194 (331)
Q Consensus 122 ~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (331)
.+.+.+....+..+.+|+..++-.++.+.. +..+ .++...+.. .+.++-. ..+.. ...+..+..+... +
T Consensus 18 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia--Gvg~~-~t~~ai~la~~a~-~ 93 (289)
T 2yxg_A 18 VDFDGLEENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIA--GAGSN-CTEEAIELSVFAE-D 93 (289)
T ss_dssp ECHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEE--ECCCS-SHHHHHHHHHHHH-H
T ss_pred cCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE--eCCCC-CHHHHHHHHHHHH-h
Confidence 455666666777888999988755443322 2222 233333222 1222211 11111 2233334343333 6
Q ss_pred hCCCeEEEEEecCCCCcCCHHHHHH-HHHHHHHcCCcEEEEc
Q 020079 195 KGINSFKFFMAYKGSFMINDELLIE-GFKRCKSLGALAMVHA 235 (331)
Q Consensus 195 ~g~~~ik~~~~~~~~~~~~~~~l~~-~~~~A~~~g~~v~~H~ 235 (331)
.|++++-+..-+ -...+++.+.+ .-+.|...++|+.++.
T Consensus 94 ~Gadavlv~~P~--y~~~s~~~l~~~f~~ia~a~~lPiilYn 133 (289)
T 2yxg_A 94 VGADAVLSITPY--YNKPTQEGLRKHFGKVAESINLPIVLYN 133 (289)
T ss_dssp HTCSEEEEECCC--SSCCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred cCCCEEEECCCC--CCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 799887554221 11235555544 4455667789988873
No 197
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=61.30 E-value=70 Score=27.67 Aligned_cols=100 Identities=11% Similarity=0.114 Sum_probs=55.9
Q ss_pred HHHHHHHhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHc---CCcEEEEcC--CchhhHHHHHHHHHcCC-CCc----c
Q 020079 188 MEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAE--NGDAVFEGQKRMIELGI-TGP----E 257 (331)
Q Consensus 188 ~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~---g~~v~~H~e--~~~~~~~~~~~~~~~G~-~~~----~ 257 (331)
++.+. +.|++++-+..+.......+.++-+++++.+.+. .+|+.+++. +..+.-+..+...+.|. .+- .
T Consensus 34 v~~li-~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Ga~davlv~~P 112 (311)
T 3h5d_A 34 IEHLL-AHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAGVGTNDTRDSIEFVKEVAEFGGFAAGLAIVP 112 (311)
T ss_dssp HHHHH-HTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEECCCSSHHHHHHHHHHHHHSCCCSEEEEECC
T ss_pred HHHHH-HcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHhcCCCcEEEEcCC
Confidence 33344 6788877443333334566778777777776654 468888863 34444444455666664 321 1
Q ss_pred cccccCChHHHHHHHHHHHHHHHhcCCCEEEEeCC
Q 020079 258 GHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVM 292 (331)
Q Consensus 258 ~~~~~~~~~~e~~~i~~~~~l~~~~g~~~~i~H~~ 292 (331)
.+. .|. +...++-+-.++...+.++.+-+++
T Consensus 113 ~y~--~~s--~~~l~~~f~~va~a~~lPiilYn~P 143 (311)
T 3h5d_A 113 YYN--KPS--QEGMYQHFKAIADASDLPIIIYNIP 143 (311)
T ss_dssp CSS--CCC--HHHHHHHHHHHHHSCSSCEEEEECH
T ss_pred CCC--CCC--HHHHHHHHHHHHHhCCCCEEEEecc
Confidence 111 222 1233444455666668888888865
No 198
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=61.24 E-value=44 Score=28.62 Aligned_cols=97 Identities=9% Similarity=-0.005 Sum_probs=53.8
Q ss_pred HhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHc---CCcEEEEcC--CchhhHHHHHHHHHcCCCCccccc--ccCChH
Q 020079 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAE--NGDAVFEGQKRMIELGITGPEGHA--LSRPPL 266 (331)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~---g~~v~~H~e--~~~~~~~~~~~~~~~G~~~~~~~~--~~~~~~ 266 (331)
+.|++++-+..+.......+.++-+++++.+.+. .+|+.+++. +..+.-+..+...+.|..+--... ...|.
T Consensus 32 ~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s- 110 (292)
T 2vc6_A 32 EEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIAGAGSNSTAEAIAFVRHAQNAGADGVLIVSPYYNKPT- 110 (292)
T ss_dssp HTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCC-
T ss_pred HcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHHcCCCEEEEcCCCCCCCC-
Confidence 6788887432222234456777777777666543 478888863 344444444556777765421110 01221
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEeCC
Q 020079 267 LEGEATTRAIRLAEFVNTPLYVVHVM 292 (331)
Q Consensus 267 ~e~~~i~~~~~l~~~~g~~~~i~H~~ 292 (331)
+...++-+-.++...+.++.+-+++
T Consensus 111 -~~~l~~~f~~ia~a~~lPiilYn~P 135 (292)
T 2vc6_A 111 -QEGIYQHFKAIDAASTIPIIVYNIP 135 (292)
T ss_dssp -HHHHHHHHHHHHHHCSSCEEEEECH
T ss_pred -HHHHHHHHHHHHHhCCCCEEEEeCc
Confidence 1223344445666778898887765
No 199
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=61.19 E-value=57 Score=28.14 Aligned_cols=97 Identities=16% Similarity=0.149 Sum_probs=50.1
Q ss_pred HhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHc---CCcEEEEcC--CchhhHHHHHHHHHcCCCCccccc--ccCChH
Q 020079 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAE--NGDAVFEGQKRMIELGITGPEGHA--LSRPPL 266 (331)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~---g~~v~~H~e--~~~~~~~~~~~~~~~G~~~~~~~~--~~~~~~ 266 (331)
+.|++++-+..+.......+.++-+++++.+.+. .+|+.+++. +..+.-+..+...+.|..+--... ...|.
T Consensus 44 ~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y~~~s- 122 (306)
T 1o5k_A 44 ENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAGTNSTEKTLKLVKQAEKLGANGVLVVTPYYNKPT- 122 (306)
T ss_dssp HTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCC-
T ss_pred HcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCCCccHHHHHHHHHHHHhcCCCEEEECCCCCCCCC-
Confidence 5677776443222334456777766666655443 467888853 334433334556666765321100 01221
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEeCC
Q 020079 267 LEGEATTRAIRLAEFVNTPLYVVHVM 292 (331)
Q Consensus 267 ~e~~~i~~~~~l~~~~g~~~~i~H~~ 292 (331)
+...++-+-.++...+.++.+-+++
T Consensus 123 -~~~l~~~f~~va~a~~lPiilYn~P 147 (306)
T 1o5k_A 123 -QEGLYQHYKYISERTDLGIVVYNVP 147 (306)
T ss_dssp -HHHHHHHHHHHHTTCSSCEEEEECH
T ss_pred -HHHHHHHHHHHHHhCCCCEEEEeCc
Confidence 1122333445566667788777765
No 200
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=61.18 E-value=44 Score=28.77 Aligned_cols=119 Identities=19% Similarity=0.133 Sum_probs=65.0
Q ss_pred hhhHHHHHHHHHHhCCCeEEEEEecC--C-CCcCCHHHHH---HHHHHHHHcCCcEEEEcCCchhhHHHHHHHHHcCCCC
Q 020079 182 EVVSDEMEVMVKEKGINSFKFFMAYK--G-SFMINDELLI---EGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITG 255 (331)
Q Consensus 182 ~~~~~~~~~~~~~~g~~~ik~~~~~~--~-~~~~~~~~l~---~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~~~G~~~ 255 (331)
+...+..+++. +.|++.|.+..... + .....+|+++ .+++..++.++++.+=..+.+..+...+ .|..-
T Consensus 52 ~~a~~~a~~~v-~~GAdIIDIGgeSTrPga~~v~~~eE~~Rv~pvI~~l~~~~vpiSIDT~~~~Va~aAl~----aGa~i 126 (294)
T 2dqw_A 52 ERALERAREMV-AEGADILDLGAESTRPGAAPVPVEEEKRRLLPVLEAVLSLGVPVSVDTRKPEVAEEALK----LGAHL 126 (294)
T ss_dssp -CCHHHHHHHH-HHTCSEEEEECC-----------CCHHHHHHHHHHHHHTTCSCEEEECSCHHHHHHHHH----HTCSE
T ss_pred HHHHHHHHHHH-HCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHH----hCCCE
Confidence 33455566666 78999887654221 1 1111234444 4444444448899888776665554433 34321
Q ss_pred cccccccCChHHHHHHHHHHHHHHHhcCCCEEEEeCC-----CH---------------HHHHHHHHHHHcCCC-EEEe
Q 020079 256 PEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVM-----SM---------------DAMEEIAKARKAGPN-FLNT 313 (331)
Q Consensus 256 ~~~~~~~~~~~~e~~~i~~~~~l~~~~g~~~~i~H~~-----~~---------------~~~~~i~~~~~~Gi~-v~~~ 313 (331)
-... ... ...+.+.+++++|+++.+.|.. +. .-.+.++.++++|++ |..|
T Consensus 127 INdV---sg~-----~d~~m~~v~a~~~~~vVlmh~~eG~p~tm~~~~~y~dv~~ev~~~l~~~i~~a~~~Gi~~IilD 197 (294)
T 2dqw_A 127 LNDV---TGL-----RDERMVALAARHGVAAVVMHMPVPDPATMMAHARYRDVVAEVKAFLEAQARRALSAGVPQVVLD 197 (294)
T ss_dssp EECS---SCS-----CCHHHHHHHHHHTCEEEEECCSSSCTTTGGGGCCCSSHHHHHHHHHHHHHHHHHHTTCSCEEEE
T ss_pred EEEC---CCC-----CChHHHHHHHHhCCCEEEEcCCCCCCccccccCccccHHHHHHHHHHHHHHHHHHCCCCcEEEc
Confidence 1110 000 1234567888999999999974 10 122357778889985 5555
No 201
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=61.15 E-value=77 Score=27.00 Aligned_cols=176 Identities=11% Similarity=0.028 Sum_probs=87.1
Q ss_pred CChhhHHHHHHHHHhCCceEEecCcCCCCC---cHHHHHHHHHHHhccceeeccccccccCCChhhHHHHHHHHHHhCCC
Q 020079 122 ETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGIN 198 (331)
Q Consensus 122 ~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 198 (331)
.+.++...-.+.+.+.|+..+.-....... ......+..+.......+.+.... .+ .+.++++. +.|.+
T Consensus 23 ~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~~~~e~~~~i~~~~~~~v~~l~----~n---~~~i~~a~-~~G~~ 94 (295)
T 1ydn_A 23 VPTADKIALINRLSDCGYARIEATSFVSPKWVPQLADSREVMAGIRRADGVRYSVLV----PN---MKGYEAAA-AAHAD 94 (295)
T ss_dssp CCHHHHHHHHHHHTTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCCSSSEEEEEC----SS---HHHHHHHH-HTTCS
T ss_pred cCHHHHHHHHHHHHHcCcCEEEEccCcCccccccccCHHHHHHHHHhCCCCEEEEEe----CC---HHHHHHHH-HCCCC
Confidence 456666666777788898876532111111 111122222222211112221111 11 35566666 68998
Q ss_pred eEEEEEecCC-----CCcCC----HHHHHHHHHHHHHcCCcEEEE------cC-----CchhhHHHHHHHHHcCCCCcc-
Q 020079 199 SFKFFMAYKG-----SFMIN----DELLIEGFKRCKSLGALAMVH------AE-----NGDAVFEGQKRMIELGITGPE- 257 (331)
Q Consensus 199 ~ik~~~~~~~-----~~~~~----~~~l~~~~~~A~~~g~~v~~H------~e-----~~~~~~~~~~~~~~~G~~~~~- 257 (331)
.+.++.+... ....+ .+.++++++.|++.|+.+..- ++ +++...+..+.+.+.|.....
T Consensus 95 ~V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l 174 (295)
T 1ydn_A 95 EIAVFISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSCVVECPYDGPVTPQAVASVTEQLFSLGCHEVSL 174 (295)
T ss_dssp EEEEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSSEETTTEECCHHHHHHHHHHHHHHTCSEEEE
T ss_pred EEEEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcCCCEEEe
Confidence 8877653210 00122 244566789999999998622 12 234444444556678874322
Q ss_pred --cccccCChHHHHHHHHHHHHHHH-hcC-CCEE-EEeCCCHHHHHHHHHHHHcCCCE
Q 020079 258 --GHALSRPPLLEGEATTRAIRLAE-FVN-TPLY-VVHVMSMDAMEEIAKARKAGPNF 310 (331)
Q Consensus 258 --~~~~~~~~~~e~~~i~~~~~l~~-~~g-~~~~-i~H~~~~~~~~~i~~~~~~Gi~v 310 (331)
.++...| ..+.+.++... ..+ .++. -+|...+-+.+-...+-+.|+..
T Consensus 175 ~Dt~G~~~P-----~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla~an~l~Ai~aG~~~ 227 (295)
T 1ydn_A 175 GDTIGRGTP-----DTVAAMLDAVLAIAPAHSLAGHYHDTGGRALDNIRVSLEKGLRV 227 (295)
T ss_dssp EETTSCCCH-----HHHHHHHHHHHTTSCGGGEEEEEBCTTSCHHHHHHHHHHHTCCE
T ss_pred cCCCCCcCH-----HHHHHHHHHHHHhCCCCeEEEEECCCcchHHHHHHHHHHhCCCE
Confidence 1222222 22333333333 233 4442 23556666667777888899874
No 202
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=61.11 E-value=82 Score=27.31 Aligned_cols=117 Identities=9% Similarity=0.064 Sum_probs=66.9
Q ss_pred HhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHc---CCcEEEEcC--CchhhHHHHHHHHHcCCCCccccc---ccCCh
Q 020079 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAE--NGDAVFEGQKRMIELGITGPEGHA---LSRPP 265 (331)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~---g~~v~~H~e--~~~~~~~~~~~~~~~G~~~~~~~~---~~~~~ 265 (331)
+.|++++-+..+.......+.++-+++++.+.+. .+|+.+++. +..+.-+..+...+.|..+--... ...|.
T Consensus 43 ~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~kp~ 122 (318)
T 3qfe_A 43 RSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMAGVGAHSTRQVLEHINDASVAGANYVLVLPPAYFGKAT 122 (318)
T ss_dssp TTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCCC---CC
T ss_pred HcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCcccCCCC
Confidence 6789887544333334567888887777766554 578999963 444444445667777875421111 01121
Q ss_pred HHHHHHHHHHHHHHHhcCCCEEEEeCCCHH-----HHHHHHHHHHcCCCEE
Q 020079 266 LLEGEATTRAIRLAEFVNTPLYVVHVMSMD-----AMEEIAKARKAGPNFL 311 (331)
Q Consensus 266 ~~e~~~i~~~~~l~~~~g~~~~i~H~~~~~-----~~~~i~~~~~~Gi~v~ 311 (331)
. +...++-+-.++...+.++.+-+++... ..+.+.++.+.--||.
T Consensus 123 ~-~~~l~~~f~~ia~a~~lPiilYn~P~~t~g~~l~~~~~~~La~~~pnIv 172 (318)
T 3qfe_A 123 T-PPVIKSFFDDVSCQSPLPVVIYNFPGVCNGIDLDSDMITTIARKNPNVV 172 (318)
T ss_dssp C-HHHHHHHHHHHHHHCSSCEEEEECCC----CCCCHHHHHHHHHHCTTEE
T ss_pred C-HHHHHHHHHHHHhhCCCCEEEEeCCcccCCCCCCHHHHHHHHhhCCCEE
Confidence 1 2233444556677778999999987421 2356666655323554
No 203
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=61.05 E-value=82 Score=27.24 Aligned_cols=115 Identities=11% Similarity=-0.013 Sum_probs=64.2
Q ss_pred HhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHc--CCcEEEEcC--CchhhHHHHHHHHHcCCCCcccccc-cCChHHH
Q 020079 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL--GALAMVHAE--NGDAVFEGQKRMIELGITGPEGHAL-SRPPLLE 268 (331)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~--g~~v~~H~e--~~~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~e 268 (331)
+.|++++-+..+.......+.++-+++++.+.+. .+|+.+++. +..+.-+..+...+.|..+.-.... ..+. +
T Consensus 40 ~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~~~~s--~ 117 (313)
T 3dz1_A 40 EVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRAKSMQVIVGVSAPGFAAMRRLARLSMDAGAAGVMIAPPPSLRT--D 117 (313)
T ss_dssp HTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHCTTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCTTCCS--H
T ss_pred HCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHcCCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCC--H
Confidence 6788887443333334567788777777766554 578888863 4444444446677777754211110 1121 2
Q ss_pred HHHHHHHHHHHHhcC--CCEEEEeCCCH----HHHHHHHHHHHcCCCE
Q 020079 269 GEATTRAIRLAEFVN--TPLYVVHVMSM----DAMEEIAKARKAGPNF 310 (331)
Q Consensus 269 ~~~i~~~~~l~~~~g--~~~~i~H~~~~----~~~~~i~~~~~~Gi~v 310 (331)
...++-+-.++...+ .++.+-+++.. -..+.+.++.+.--||
T Consensus 118 ~~l~~~f~~va~a~~~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnI 165 (313)
T 3dz1_A 118 EQITTYFRQATEAIGDDVPWVLQDYPLTLSVVMTPKVIRQIVMDSASC 165 (313)
T ss_dssp HHHHHHHHHHHHHHCTTSCEEEEECHHHHCCCCCHHHHHHHHHHCSSE
T ss_pred HHHHHHHHHHHHhCCCCCcEEEEeCccccCcCCCHHHHHHHHHhCCCE
Confidence 233444556666667 89988887531 1235566655432344
No 204
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=60.94 E-value=80 Score=27.12 Aligned_cols=108 Identities=10% Similarity=-0.052 Sum_probs=56.2
Q ss_pred CCChhhHHHHHHHHHhCCceEEecCcCCCCC---cHHH---HHHHHHHHh-ccceeeccccccccC-CChhhHHHHHHHH
Q 020079 121 SETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTA---GFEAYEKKA-KNSCMDYGFHMAITK-WDEVVSDEMEVMV 192 (331)
Q Consensus 121 ~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 192 (331)
..+.+.+....+..+.+|+..++-.++.+.. +..+ .++...+.. .+.++- .+... ...+..+..+...
T Consensus 29 ~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpVi----aGvg~~~t~~ai~la~~A~ 104 (301)
T 1xky_A 29 NIDFAKTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVI----AGTGSNNTHASIDLTKKAT 104 (301)
T ss_dssp SBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEE----EECCCSCHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEE----eCCCCCCHHHHHHHHHHHH
Confidence 3455666677777889999998755543322 2222 233333322 122221 11221 2233444444433
Q ss_pred HHhCCCeEEEEEecCCCCcCCHHHHHHH-HHHHHHcCCcEEEEc
Q 020079 193 KEKGINSFKFFMAYKGSFMINDELLIEG-FKRCKSLGALAMVHA 235 (331)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~-~~~A~~~g~~v~~H~ 235 (331)
+.|++++-+..-+ -...+++.+.+- .+.|...++|+.++.
T Consensus 105 -~~Gadavlv~~P~--y~~~s~~~l~~~f~~va~a~~lPiilYn 145 (301)
T 1xky_A 105 -EVGVDAVMLVAPY--YNKPSQEGMYQHFKAIAESTPLPVMLYN 145 (301)
T ss_dssp -HTTCSEEEEECCC--SSCCCHHHHHHHHHHHHHTCSSCEEEEE
T ss_pred -hcCCCEEEEcCCC--CCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 6899987554221 122356655544 455666789998873
No 205
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=60.89 E-value=87 Score=27.52 Aligned_cols=109 Identities=7% Similarity=-0.086 Sum_probs=55.5
Q ss_pred CCCChhhHHHHHHHHHhCCceEEecCcCCCCC---cHHH---HHHHHHHHhc-cceeeccccccccC-CChhhHHHHHHH
Q 020079 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTA---GFEAYEKKAK-NSCMDYGFHMAITK-WDEVVSDEMEVM 191 (331)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~ 191 (331)
+..+.+.+....+..+.+||..++-.+..+.. +..+ .++...+... +.++- .+... ...+..+..+..
T Consensus 47 g~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpVi----aGvg~~st~eai~la~~A 122 (343)
T 2v9d_A 47 GQLDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVL----IGTGGTNARETIELSQHA 122 (343)
T ss_dssp SSBCHHHHHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEE----EECCSSCHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEE----EecCCCCHHHHHHHHHHH
Confidence 34556667677777888999888755443322 2222 2333333221 22221 11211 223344444333
Q ss_pred HHHhCCCeEEEEEecCCCCcCCHHHHHHH-HHHHHHcCCcEEEEc
Q 020079 192 VKEKGINSFKFFMAYKGSFMINDELLIEG-FKRCKSLGALAMVHA 235 (331)
Q Consensus 192 ~~~~g~~~ik~~~~~~~~~~~~~~~l~~~-~~~A~~~g~~v~~H~ 235 (331)
. +.|++++-+..-+ -...+++.+.+- -+.|...++|+.++.
T Consensus 123 ~-~~Gadavlv~~P~--Y~~~s~~~l~~~f~~VA~a~~lPiilYn 164 (343)
T 2v9d_A 123 Q-QAGADGIVVINPY--YWKVSEANLIRYFEQVADSVTLPVMLYN 164 (343)
T ss_dssp H-HHTCSEEEEECCS--SSCCCHHHHHHHHHHHHHTCSSCEEEEE
T ss_pred H-hcCCCEEEECCCC--CCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 3 6799887554221 112355655544 455666789988873
No 206
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=60.57 E-value=69 Score=27.76 Aligned_cols=109 Identities=9% Similarity=-0.033 Sum_probs=58.1
Q ss_pred CCCChhhHHHHHHHHHhCCceEEecCcCCCCC---cHHH---HHHHHHHHh-ccceeeccccccccCCChhhHHHHHHHH
Q 020079 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTA---GFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMV 192 (331)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (331)
+..+.+.+....+..+.+||..++-.++.+.. +..+ .++...+.. .+.++-.+ .+ ....+..+..+...
T Consensus 28 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpViaG--vg--~~t~~ai~la~~A~ 103 (316)
T 3e96_A 28 GSIDWHHYKETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVAG--IG--YATSTAIELGNAAK 103 (316)
T ss_dssp CCBCHHHHHHHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEE--EC--SSHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEE--eC--cCHHHHHHHHHHHH
Confidence 34556677777778899999998865543322 2222 333333332 22232222 12 13344444444444
Q ss_pred HHhCCCeEEEEEecCCCCcCCHHHHHH-HHHHHHHcCCcEEEEc
Q 020079 193 KEKGINSFKFFMAYKGSFMINDELLIE-GFKRCKSLGALAMVHA 235 (331)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~-~~~~A~~~g~~v~~H~ 235 (331)
+.|++++-+.. |. -...+++.+.+ .-+.|...++|+.+..
T Consensus 104 -~~Gadavlv~~-P~-y~~~s~~~l~~~f~~va~a~~lPiilYn 144 (316)
T 3e96_A 104 -AAGADAVMIHM-PI-HPYVTAGGVYAYFRDIIEALDFPSLVYF 144 (316)
T ss_dssp -HHTCSEEEECC-CC-CSCCCHHHHHHHHHHHHHHHTSCEEEEE
T ss_pred -hcCCCEEEEcC-CC-CCCCCHHHHHHHHHHHHHhCCCCEEEEe
Confidence 68999875432 21 12235555544 4455666689998874
No 207
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=60.42 E-value=81 Score=27.02 Aligned_cols=107 Identities=6% Similarity=-0.151 Sum_probs=54.2
Q ss_pred CChhhHHHHHHHHHhCCceEEecCcCCCCC---cHHH---HHHHHHHHhc-cceeeccccccccC-CChhhHHHHHHHHH
Q 020079 122 ETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTA---GFEAYEKKAK-NSCMDYGFHMAITK-WDEVVSDEMEVMVK 193 (331)
Q Consensus 122 ~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 193 (331)
.+.+.+....+..+.+|+..++-.++.+.. +..+ .++...+... +.++- .+... ...+..+..+...
T Consensus 18 iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvi----aGvg~~~t~~ai~la~~A~- 92 (297)
T 2rfg_A 18 VDEKALAGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVI----AGAGSNNPVEAVRYAQHAQ- 92 (297)
T ss_dssp ECHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBE----EECCCSSHHHHHHHHHHHH-
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCeEE----EccCCCCHHHHHHHHHHHH-
Confidence 445566666777888999988755443322 2222 2333333221 22211 11221 2233344443333
Q ss_pred HhCCCeEEEEEecCCCCcCCHHHHHHH-HHHHHHcCCcEEEEc
Q 020079 194 EKGINSFKFFMAYKGSFMINDELLIEG-FKRCKSLGALAMVHA 235 (331)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~-~~~A~~~g~~v~~H~ 235 (331)
+.|++++-+.. | .-...+++.+.+- -+.|...++|+.++.
T Consensus 93 ~~Gadavlv~~-P-~y~~~s~~~l~~~f~~va~a~~lPiilYn 133 (297)
T 2rfg_A 93 QAGADAVLCVA-G-YYNRPSQEGLYQHFKMVHDAIDIPIIVYN 133 (297)
T ss_dssp HHTCSEEEECC-C-TTTCCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred hcCCCEEEEcC-C-CCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 67998875432 1 1112356655544 455667789998873
No 208
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=60.28 E-value=61 Score=28.53 Aligned_cols=97 Identities=11% Similarity=0.034 Sum_probs=50.8
Q ss_pred HhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHc---CCcEEEEcC--CchhhHHHHHHHHHcCCCCcccccc--cCChH
Q 020079 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAE--NGDAVFEGQKRMIELGITGPEGHAL--SRPPL 266 (331)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~---g~~v~~H~e--~~~~~~~~~~~~~~~G~~~~~~~~~--~~~~~ 266 (331)
+.|++++-+..+.......+.++-+++++.+.+. .+|+.+++. +..+.-+..+...+.|..+.-.... ..| .
T Consensus 63 ~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~Y~~~-s 141 (343)
T 2v9d_A 63 KAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTGGTNARETIELSQHAQQAGADGIVVINPYYWKV-S 141 (343)
T ss_dssp HTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCSSCHHHHHHHHHHHHHHTCSEEEEECCSSSCC-C
T ss_pred HcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCC-C
Confidence 5788776443222233456777766666655443 467888853 3344434445566677654211000 112 1
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEeCC
Q 020079 267 LEGEATTRAIRLAEFVNTPLYVVHVM 292 (331)
Q Consensus 267 ~e~~~i~~~~~l~~~~g~~~~i~H~~ 292 (331)
+...++-+-.++...+.++.+-+++
T Consensus 142 -~~~l~~~f~~VA~a~~lPiilYn~P 166 (343)
T 2v9d_A 142 -EANLIRYFEQVADSVTLPVMLYNFP 166 (343)
T ss_dssp -HHHHHHHHHHHHHTCSSCEEEEECH
T ss_pred -HHHHHHHHHHHHHhcCCCEEEEeCc
Confidence 1223334445566667888777765
No 209
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=60.19 E-value=54 Score=28.15 Aligned_cols=100 Identities=10% Similarity=0.042 Sum_probs=57.7
Q ss_pred HHHHHHhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHc---CCcEEEEcC--CchhhHHHHHHHHHcCCCCc----ccc
Q 020079 189 EVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAE--NGDAVFEGQKRMIELGITGP----EGH 259 (331)
Q Consensus 189 ~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~---g~~v~~H~e--~~~~~~~~~~~~~~~G~~~~----~~~ 259 (331)
+.+. +.|++++-+..+.......+.++-+++++.+.+. .+|+.+++. +..+.-+..+...+.|..+- ..+
T Consensus 28 ~~li-~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y 106 (297)
T 2rfg_A 28 DWQI-KHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGAGSNNPVEAVRYAQHAQQAGADAVLCVAGYY 106 (297)
T ss_dssp HHHH-HTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCTT
T ss_pred HHHH-HcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEccCCCCHHHHHHHHHHHHhcCCCEEEEcCCCC
Confidence 3344 6788887443232334567887777777766543 478888863 34444444456677777542 111
Q ss_pred cccCChHHHHHHHHHHHHHHHhcCCCEEEEeCCC
Q 020079 260 ALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMS 293 (331)
Q Consensus 260 ~~~~~~~~e~~~i~~~~~l~~~~g~~~~i~H~~~ 293 (331)
. .|. +...++-+-.++...+.++.+-+++.
T Consensus 107 ~--~~s--~~~l~~~f~~va~a~~lPiilYn~P~ 136 (297)
T 2rfg_A 107 N--RPS--QEGLYQHFKMVHDAIDIPIIVYNIPP 136 (297)
T ss_dssp T--CCC--HHHHHHHHHHHHHHCSSCEEEEECHH
T ss_pred C--CCC--HHHHHHHHHHHHHhcCCCEEEEeCcc
Confidence 1 221 22334444466777789998888653
No 210
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=60.08 E-value=77 Score=27.35 Aligned_cols=112 Identities=9% Similarity=-0.004 Sum_probs=56.9
Q ss_pred CCCChhhHHHHHHHHHhCCceEEecCcCCCCC---cHHH---HHHHHHHHh-ccceeeccccccccCCChhhHHHHHHHH
Q 020079 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTA---GFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMV 192 (331)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (331)
+..+.+.+....+..+.+||..++-.++.+.. +..+ .++...+.. .+.++-.+ .+. ....+..+..+...
T Consensus 24 g~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaG--vg~-~~t~~ai~la~~A~ 100 (309)
T 3fkr_A 24 GDLDLASQKRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVT--TSH-YSTQVCAARSLRAQ 100 (309)
T ss_dssp SSBCHHHHHHHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEE--CCC-SSHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEe--cCC-chHHHHHHHHHHHH
Confidence 34556677777778889999988755443322 2222 333333322 22222211 111 12233444444333
Q ss_pred HHhCCCeEEEEEecCCC-CcCCHHHHHHH-HHHHHHcCCcEEEEc
Q 020079 193 KEKGINSFKFFMAYKGS-FMINDELLIEG-FKRCKSLGALAMVHA 235 (331)
Q Consensus 193 ~~~g~~~ik~~~~~~~~-~~~~~~~l~~~-~~~A~~~g~~v~~H~ 235 (331)
+.|++++-+..-+... ...+++.+.+- .+.|+..++|+.+..
T Consensus 101 -~~Gadavlv~~Pyy~~~~~~s~~~l~~~f~~va~a~~lPiilYn 144 (309)
T 3fkr_A 101 -QLGAAMVMAMPPYHGATFRVPEAQIFEFYARVSDAIAIPIMVQD 144 (309)
T ss_dssp -HTTCSEEEECCSCBTTTBCCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred -HcCCCEEEEcCCCCccCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 6899987553211100 12356655544 456666799998873
No 211
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=59.72 E-value=87 Score=27.68 Aligned_cols=33 Identities=15% Similarity=0.033 Sum_probs=25.3
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEcCCchhhHHH
Q 020079 212 INDELLIEGFKRCKSLGALAMVHAENGDAVFEG 244 (331)
Q Consensus 212 ~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~ 244 (331)
.+.+.++.+.+.+++.|+++..=+-+...++..
T Consensus 75 l~~e~~~~L~~~~~~~Gi~~~st~fD~~svd~l 107 (350)
T 3g8r_A 75 LQPEQMQKLVAEMKANGFKAICTPFDEESVDLI 107 (350)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCcEEeccCCHHHHHHH
Confidence 577888999999999999988776655554433
No 212
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=59.20 E-value=84 Score=26.81 Aligned_cols=108 Identities=8% Similarity=-0.140 Sum_probs=54.4
Q ss_pred CChhhHHHHHHHHHhCCceEEecCcCCCCC---cHHH---HHHHHHHHh-ccceeeccccccccCCChhhHHHHHHHHHH
Q 020079 122 ETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTA---GFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMVKE 194 (331)
Q Consensus 122 ~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (331)
.+.+.+....+..+.+|+..++-.++.+.. +..+ .++...+.. .+.++-. ..+.. ...+..+..+.. ++
T Consensus 18 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia--Gvg~~-~t~~ai~la~~A-~~ 93 (292)
T 2vc6_A 18 IDEVALHDLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIA--GAGSN-STAEAIAFVRHA-QN 93 (292)
T ss_dssp ECHHHHHHHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEE--ECCCS-SHHHHHHHHHHH-HH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE--ecCCc-cHHHHHHHHHHH-HH
Confidence 455666666777889999998855443322 2222 233333322 1222211 11111 123333434333 36
Q ss_pred hCCCeEEEEEecCCCCcCCHHHHHH-HHHHHHHcCCcEEEEc
Q 020079 195 KGINSFKFFMAYKGSFMINDELLIE-GFKRCKSLGALAMVHA 235 (331)
Q Consensus 195 ~g~~~ik~~~~~~~~~~~~~~~l~~-~~~~A~~~g~~v~~H~ 235 (331)
.|++++-+..-+ -...+++.+.+ .-+.|+..++|+..+.
T Consensus 94 ~Gadavlv~~P~--y~~~s~~~l~~~f~~ia~a~~lPiilYn 133 (292)
T 2vc6_A 94 AGADGVLIVSPY--YNKPTQEGIYQHFKAIDAASTIPIIVYN 133 (292)
T ss_dssp TTCSEEEEECCC--SSCCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred cCCCEEEEcCCC--CCCCCHHHHHHHHHHHHHhCCCCEEEEe
Confidence 899987543211 11235565554 4455667789998873
No 213
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=58.84 E-value=80 Score=27.20 Aligned_cols=107 Identities=9% Similarity=-0.058 Sum_probs=54.4
Q ss_pred CChhhHHHHHHHHHhCCceEEecCcCCCCC---cHHH---HHHHHHHHh-ccceeeccccccccC-CChhhHHHHHHHHH
Q 020079 122 ETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTA---GFEAYEKKA-KNSCMDYGFHMAITK-WDEVVSDEMEVMVK 193 (331)
Q Consensus 122 ~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 193 (331)
.+.+.+....+..+.+|+..++-.++.+.. +..+ .++...+.. .+.++- .+... ...+..+..+...
T Consensus 30 iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpVi----aGvg~~st~~ai~la~~A~- 104 (306)
T 1o5k_A 30 LDLESYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVI----VGAGTNSTEKTLKLVKQAE- 104 (306)
T ss_dssp ECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEE----EECCCSCHHHHHHHHHHHH-
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEE----EcCCCccHHHHHHHHHHHH-
Confidence 445556666777889999988755443322 2222 233333322 122221 11211 2233444444333
Q ss_pred HhCCCeEEEEEecCCCCcCCHHHHHHHH-HHHHHcCCcEEEEc
Q 020079 194 EKGINSFKFFMAYKGSFMINDELLIEGF-KRCKSLGALAMVHA 235 (331)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~-~~A~~~g~~v~~H~ 235 (331)
+.|++++-+..-+ -...+++.+.+-+ +.|...++|+.++.
T Consensus 105 ~~Gadavlv~~P~--y~~~s~~~l~~~f~~va~a~~lPiilYn 145 (306)
T 1o5k_A 105 KLGANGVLVVTPY--YNKPTQEGLYQHYKYISERTDLGIVVYN 145 (306)
T ss_dssp HHTCSEEEEECCC--SSCCCHHHHHHHHHHHHTTCSSCEEEEE
T ss_pred hcCCCEEEECCCC--CCCCCHHHHHHHHHHHHHhCCCCEEEEe
Confidence 6899987554221 1223566655544 45666689998873
No 214
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=58.57 E-value=79 Score=27.37 Aligned_cols=50 Identities=14% Similarity=0.239 Sum_probs=33.7
Q ss_pred HHHHHHHHHHhCCCeEEEEEec-CC------CCcCCHHHHHHHHHHHHHcCCcEEEEcCC
Q 020079 185 SDEMEVMVKEKGINSFKFFMAY-KG------SFMINDELLIEGFKRCKSLGALAMVHAEN 237 (331)
Q Consensus 185 ~~~~~~~~~~~g~~~ik~~~~~-~~------~~~~~~~~l~~~~~~A~~~g~~v~~H~e~ 237 (331)
.++..+++++.|++.+-+.++. |+ .+..+.+.|+++-+ +.++|+..|-.+
T Consensus 155 Peea~~Fv~~TgvD~LAvaiGt~HG~Yk~~g~p~L~~~~L~~I~~---~~~vpLVlHGgS 211 (305)
T 1rvg_A 155 PEEARIFMERTGADYLAVAIGTSHGAYKGKGRPFIDHARLERIAR---LVPAPLVLHGAS 211 (305)
T ss_dssp HHHHHHHHHHHCCSEEEECSSCCSSSBCSSSSCCCCHHHHHHHHH---HCCSCEEECSCC
T ss_pred HHHHHHHHHHHCCCEEEEecCccccccCCCCCCccCHHHHHHHHH---hcCCCEEEeCCC
Confidence 5667777767899987664432 33 34456777776654 457999999655
No 215
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=58.51 E-value=89 Score=26.87 Aligned_cols=109 Identities=9% Similarity=-0.054 Sum_probs=56.5
Q ss_pred CCCChhhHHHHHHHHHhCCceEEecCcCCCCC---cHHH---HHHHHHHHh-ccceeeccccccccCCChhhHHHHHHHH
Q 020079 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTA---GFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMV 192 (331)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (331)
+..+.+.+....+..+.+|+..++-.+..+.. +..+ .++...+.. .+.++-. ..+. ....+..+..+...
T Consensus 32 g~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia--Gvg~-~st~~ai~la~~A~ 108 (304)
T 3cpr_A 32 GDIDIAAGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIA--GVGT-NNTRTSVELAEAAA 108 (304)
T ss_dssp SCBCHHHHHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEE--ECCC-SCHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEe--cCCC-CCHHHHHHHHHHHH
Confidence 34566677777788889999988755443322 2222 233333322 2222211 1111 12233444444433
Q ss_pred HHhCCCeEEEEEecCCCCcCCHHHHHH-HHHHHHHcCCcEEEE
Q 020079 193 KEKGINSFKFFMAYKGSFMINDELLIE-GFKRCKSLGALAMVH 234 (331)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~-~~~~A~~~g~~v~~H 234 (331)
+.|++++-+..-+ -...+++.+.+ .-+.|...++|+.+.
T Consensus 109 -~~Gadavlv~~P~--y~~~~~~~l~~~f~~ia~a~~lPiilY 148 (304)
T 3cpr_A 109 -SAGADGLLVVTPY--YSKPSQEGLLAHFGAIAAATEVPICLY 148 (304)
T ss_dssp -HTTCSEEEEECCC--SSCCCHHHHHHHHHHHHHHCCSCEEEE
T ss_pred -hcCCCEEEECCCC--CCCCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 6899987554221 11235555544 445567779999886
No 216
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=58.40 E-value=41 Score=28.98 Aligned_cols=98 Identities=8% Similarity=-0.010 Sum_probs=53.7
Q ss_pred HhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHc---CCcEEEEc--CCchhhHHHHHHHHHcCCCCcccccc--cCChH
Q 020079 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHA--ENGDAVFEGQKRMIELGITGPEGHAL--SRPPL 266 (331)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~---g~~v~~H~--e~~~~~~~~~~~~~~~G~~~~~~~~~--~~~~~ 266 (331)
+.|++++-+..+.......+.++-+++++.+.+. .+|+.+++ .+..+.-+..+...+.|..+--.... ..| .
T Consensus 36 ~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~-~ 114 (300)
T 3eb2_A 36 QAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVASTSVADAVAQAKLYEKLGADGILAILEAYFPL-K 114 (300)
T ss_dssp HTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEEESSHHHHHHHHHHHHHHTCSEEEEEECCSSCC-C
T ss_pred HcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCC-C
Confidence 5787776332222233456777777766665543 46777775 34444444445667777654221110 112 1
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEeCCC
Q 020079 267 LEGEATTRAIRLAEFVNTPLYVVHVMS 293 (331)
Q Consensus 267 ~e~~~i~~~~~l~~~~g~~~~i~H~~~ 293 (331)
+...++-+-.++...+.++.+-+++.
T Consensus 115 -~~~l~~~f~~va~a~~lPiilYn~P~ 140 (300)
T 3eb2_A 115 -DAQIESYFRAIADAVEIPVVIYTNPQ 140 (300)
T ss_dssp -HHHHHHHHHHHHHHCSSCEEEEECTT
T ss_pred -HHHHHHHHHHHHHHCCCCEEEEECcc
Confidence 12334445566667788888888763
No 217
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=58.32 E-value=88 Score=26.73 Aligned_cols=107 Identities=9% Similarity=-0.089 Sum_probs=54.0
Q ss_pred CChhhHHHHHHHHHhCCceEEecCcCCCCC---cHHH---HHHHHHHHh-ccceeeccccccccCCChhhHHHHHHHHHH
Q 020079 122 ETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTA---GFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMVKE 194 (331)
Q Consensus 122 ~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (331)
.+.+.+....+..+.+|+..++-.++.+.. +..+ .++...+.. .+.++-. ..+.. ...+..+..+... +
T Consensus 18 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia--Gvg~~-~t~~ai~la~~A~-~ 93 (294)
T 2ehh_A 18 VDYEALGNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIA--GTGGN-ATHEAVHLTAHAK-E 93 (294)
T ss_dssp ECHHHHHHHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEE--ECCCS-CHHHHHHHHHHHH-H
T ss_pred cCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE--ecCCC-CHHHHHHHHHHHH-h
Confidence 455666666777888999988755443322 2222 233333322 1222211 11111 2233344444333 6
Q ss_pred hCCCeEEEEEecCCCCcCCHHHHHH-HHHHHHHcCCcEEEE
Q 020079 195 KGINSFKFFMAYKGSFMINDELLIE-GFKRCKSLGALAMVH 234 (331)
Q Consensus 195 ~g~~~ik~~~~~~~~~~~~~~~l~~-~~~~A~~~g~~v~~H 234 (331)
.|++++-+..-+ -...+++.+.+ ..+.|...++|+..+
T Consensus 94 ~Gadavlv~~P~--y~~~s~~~l~~~f~~va~a~~lPiilY 132 (294)
T 2ehh_A 94 VGADGALVVVPY--YNKPTQRGLYEHFKTVAQEVDIPIIIY 132 (294)
T ss_dssp TTCSEEEEECCC--SSCCCHHHHHHHHHHHHHHCCSCEEEE
T ss_pred cCCCEEEECCCC--CCCCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 799887554221 11235555554 445566678998887
No 218
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=58.27 E-value=79 Score=27.43 Aligned_cols=109 Identities=6% Similarity=-0.168 Sum_probs=51.1
Q ss_pred CChhhHHHHHHHHHhCCceEEecCcCCCCC---cHHH---HHHHHHHHh-ccceeeccccccccCCChhhHHHHHHHHHH
Q 020079 122 ETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTA---GFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMVKE 194 (331)
Q Consensus 122 ~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (331)
.+.+.+....+..+.+||..++-.+..+.. +..+ .++...+.. .+.++-. ..+. ....+..+..+... +
T Consensus 29 iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpvia--Gvg~-~~t~~ai~la~~a~-~ 104 (318)
T 3qfe_A 29 LDLASQERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMA--GVGA-HSTRQVLEHINDAS-V 104 (318)
T ss_dssp ECHHHHHHHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEE--ECCC-SSHHHHHHHHHHHH-H
T ss_pred CCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE--eCCC-CCHHHHHHHHHHHH-H
Confidence 445566666777788899887755433322 2222 233332222 1222211 1111 12233344443333 6
Q ss_pred hCCCeEEEEEecCCCCcCCHHHHH-HHHHHHHHcCCcEEEE
Q 020079 195 KGINSFKFFMAYKGSFMINDELLI-EGFKRCKSLGALAMVH 234 (331)
Q Consensus 195 ~g~~~ik~~~~~~~~~~~~~~~l~-~~~~~A~~~g~~v~~H 234 (331)
.|++++-+..-+-.....+++.+. ..-+.|...++|+.+.
T Consensus 105 ~Gadavlv~~P~y~~kp~~~~~l~~~f~~ia~a~~lPiilY 145 (318)
T 3qfe_A 105 AGANYVLVLPPAYFGKATTPPVIKSFFDDVSCQSPLPVVIY 145 (318)
T ss_dssp HTCSEEEECCCCC---CCCHHHHHHHHHHHHHHCSSCEEEE
T ss_pred cCCCEEEEeCCcccCCCCCHHHHHHHHHHHHhhCCCCEEEE
Confidence 788877543210000013455444 4445566678888877
No 219
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=58.17 E-value=81 Score=26.30 Aligned_cols=97 Identities=15% Similarity=0.066 Sum_probs=54.3
Q ss_pred HHHHHHHHHHhCCCeEEE-EEecCCCC--cCCHHHHHHHHHHHHHcCCcEEEEc--CCchhhHHHHHHHHHcCCCCcccc
Q 020079 185 SDEMEVMVKEKGINSFKF-FMAYKGSF--MINDELLIEGFKRCKSLGALAMVHA--ENGDAVFEGQKRMIELGITGPEGH 259 (331)
Q Consensus 185 ~~~~~~~~~~~g~~~ik~-~~~~~~~~--~~~~~~l~~~~~~A~~~g~~v~~H~--e~~~~~~~~~~~~~~~G~~~~~~~ 259 (331)
.++++.+. +.|++.+.+ .++.+..+ ....+.++++.+.. -++++.+|. ++++.
T Consensus 43 ~~~i~~l~-~~G~d~lHvDVmDg~FVpnit~G~~~v~~lr~~~--p~~~ldvHLmv~~p~~------------------- 100 (246)
T 3inp_A 43 GDDVKAVL-AAGADNIHFDVMDNHYVPNLTFGPMVLKALRDYG--ITAGMDVHLMVKPVDA------------------- 100 (246)
T ss_dssp HHHHHHHH-HTTCCCEEEEEEBSSSSSCBCCCHHHHHHHHHHT--CCSCEEEEEECSSCHH-------------------
T ss_pred HHHHHHHH-HcCCCEEEEEecCCCcCcchhcCHHHHHHHHHhC--CCCeEEEEEeeCCHHH-------------------
Confidence 34555554 678886644 33444332 34566666664432 157888884 54421
Q ss_pred cccCChHHHHHHHHHHHHHHHhcCCCEEEEeCCC-HHHHHHHHHHHHcCCCEEEecCCcc
Q 020079 260 ALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMS-MDAMEEIAKARKAGPNFLNTTIPLC 318 (331)
Q Consensus 260 ~~~~~~~~e~~~i~~~~~l~~~~g~~~~i~H~~~-~~~~~~i~~~~~~Gi~v~~~~~p~~ 318 (331)
.++.+.+.|+.....|.-. ..-.+.++++|+.|+.+.+.++|..
T Consensus 101 ---------------~i~~~~~aGAd~itvH~Ea~~~~~~~i~~ir~~G~k~Gvalnp~T 145 (246)
T 3inp_A 101 ---------------LIESFAKAGATSIVFHPEASEHIDRSLQLIKSFGIQAGLALNPAT 145 (246)
T ss_dssp ---------------HHHHHHHHTCSEEEECGGGCSCHHHHHHHHHTTTSEEEEEECTTC
T ss_pred ---------------HHHHHHHcCCCEEEEccccchhHHHHHHHHHHcCCeEEEEecCCC
Confidence 1223345566666666432 2233567777777877777777654
No 220
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=58.00 E-value=91 Score=26.80 Aligned_cols=109 Identities=9% Similarity=-0.053 Sum_probs=55.7
Q ss_pred CCChhhHHHHHHHHHhCCceEEecCcCCCCC---cHHH---HHHHHHHHh-ccceeeccccccccCCChhhHHHHHHHHH
Q 020079 121 SETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTA---GFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMVK 193 (331)
Q Consensus 121 ~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (331)
..+.+.+....+..+.+|+..++-.++.+.. +..+ .++...+.. .+.++-. ..+.. ...+..+..+...
T Consensus 28 ~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpVia--Gvg~~-~t~~ai~la~~A~- 103 (303)
T 2wkj_A 28 ALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIA--HVGCV-STAESQQLAASAK- 103 (303)
T ss_dssp SBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEE--ECCCS-SHHHHHHHHHHHH-
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEE--ecCCC-CHHHHHHHHHHHH-
Confidence 3455566666777889999998765543322 2222 233333322 2222221 11111 2233444444433
Q ss_pred HhCCCeEEEEEecCCCCcCCHHHHHHHH-HHHHHcC-CcEEEEc
Q 020079 194 EKGINSFKFFMAYKGSFMINDELLIEGF-KRCKSLG-ALAMVHA 235 (331)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~-~~A~~~g-~~v~~H~ 235 (331)
+.|++++-+..-+ -...+++.+.+-+ +.|...+ +|+.++.
T Consensus 104 ~~Gadavlv~~P~--y~~~s~~~l~~~f~~va~a~~~lPiilYn 145 (303)
T 2wkj_A 104 RYGFDAVSAVTPF--YYPFSFEEHCDHYRAIIDSADGLPMVVYN 145 (303)
T ss_dssp HHTCSEEEEECCC--SSCCCHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred hCCCCEEEecCCC--CCCCCHHHHHHHHHHHHHhCCCCCEEEEe
Confidence 6899988554221 1223666655444 4556667 9998873
No 221
>3erp_A Putative oxidoreductase; funded by the national institute of allergy and infectious D of NIH contract number HHSN272200700058C; 1.55A {Salmonella enterica subsp}
Probab=57.68 E-value=98 Score=27.12 Aligned_cols=167 Identities=13% Similarity=0.054 Sum_probs=80.6
Q ss_pred CChhhHHHHHHHHHhCCceEEecCcCCCC--CcHHHHHHHHHHH---hcc--ceee--cccc--cccc---CCChhhHHH
Q 020079 122 ETIDDFFSGQAAALAGGTTMHIDFVIPIN--GSLTAGFEAYEKK---AKN--SCMD--YGFH--MAIT---KWDEVVSDE 187 (331)
Q Consensus 122 ~~~~~~~~~~~~~l~~GvTtv~d~~~~~~--~~~~~~~~~~~~~---~~~--~~~~--~~~~--~~~~---~~~~~~~~~ 187 (331)
...+......+.++..|++.+=....+.+ +...+.+-...+. ..+ ..+. ++.. .... ...+...+.
T Consensus 61 ~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~~G~sE~~lG~al~~~~~~~R~~v~I~TK~g~~~~~~~~~~~~s~~~i~~~ 140 (353)
T 3erp_A 61 TRVENSRALLQRAFDLGITHFDLANNYGPPPGSAECNFGRILQEDFLPWRDELIISTKAGYTMWDGPYGDWGSRKYLIAS 140 (353)
T ss_dssp SCHHHHHHHHHHHHHTTCCEEECCTTCTTTTTHHHHHHHHHHHHHTGGGGGGCEEEEEESSCCSSSTTSSTTCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEChhhhCCCCChHHHHHHHHHHhhccCCCCeEEEEeeeccCCCCCcccCCCCHHHHHHH
Confidence 34566677788899999998743323333 2234444333321 112 1111 1111 0000 012334455
Q ss_pred HHHHHHHhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHHHcCCCCcccccccCChHH
Q 020079 188 MEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLL 267 (331)
Q Consensus 188 ~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~ 267 (331)
+++-.++-|.+.+.++.--......+.++..+.++..++.|+.-.+=+.+-.
T Consensus 141 ~e~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~aL~~l~~~Gkir~iGvSn~~---------------------------- 192 (353)
T 3erp_A 141 LDQSLKRMGLEYVDIFYHHRPDPETPLKETMKALDHLVRHGKALYVGISNYP---------------------------- 192 (353)
T ss_dssp HHHHHHHHTCSCEEEEEECSCCTTSCHHHHHHHHHHHHHTTSEEEEEEESCC----------------------------
T ss_pred HHHHHHHhCCCeEeEEEecCCCCCCCHHHHHHHHHHHHHCCCccEEEecCCC----------------------------
Confidence 5555556788888776531111223445555666677777765444322111
Q ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCC-----HHHHHHHHHHHHcCCCEEEecCCcc
Q 020079 268 EGEATTRAIRLAEFVNTPLYVVHVMS-----MDAMEEIAKARKAGPNFLNTTIPLC 318 (331)
Q Consensus 268 e~~~i~~~~~l~~~~g~~~~i~H~~~-----~~~~~~i~~~~~~Gi~v~~~~~p~~ 318 (331)
...+++.+..+...+.+..+..+.. ...-+.+..++++||.|.+ -+|..
T Consensus 193 -~~~l~~~~~~~~~~~~~~~~~Q~~~~~~~~~~e~~ll~~~~~~gI~v~a-~spL~ 246 (353)
T 3erp_A 193 -ADLARQAIDILEDLGTPCLIHQPKYSLFERWVEDGLLALLQEKGVGSIA-FSPLA 246 (353)
T ss_dssp -HHHHHHHHHHHHHHTCCEEEEECBCBTTBCGGGGTHHHHHHHHTCEEEE-BSTTG
T ss_pred -HHHHHHHHHHHHHcCCCeEEeeccccccccchhhHHHHHHHHcCCeEEE-ecccc
Confidence 1223334444555555555554321 1122467778888876654 34433
No 222
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=57.60 E-value=93 Score=26.81 Aligned_cols=100 Identities=11% Similarity=-0.021 Sum_probs=60.5
Q ss_pred hhHHHHHHHHHHhCCCeEEEEEecCCCCcCCHHHHHHHHHHHH----HcCCcEEEEcCCchhhHHHHHHHHHcCCCCccc
Q 020079 183 VVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCK----SLGALAMVHAENGDAVFEGQKRMIELGITGPEG 258 (331)
Q Consensus 183 ~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~----~~g~~v~~H~e~~~~~~~~~~~~~~~G~~~~~~ 258 (331)
...+..+++. +.|++.|.+..+. ......+++++++...+ ..++|+++=....+..+...+.+ .|..--
T Consensus 38 ~a~~~A~~~v-~~GAdiIDIg~g~--~~v~~~eem~rvv~~i~~~~~~~~vpisIDT~~~~V~eaaL~~~--~Ga~iI-- 110 (300)
T 3k13_A 38 EALSIARQQV-EDGALVIDVNMDD--GLLDARTEMTTFLNLIMSEPEIARVPVMIDSSKWEVIEAGLKCL--QGKSIV-- 110 (300)
T ss_dssp HHHHHHHHHH-HTTCSEEEEECCC--TTSCHHHHHHHHHHHHHTCHHHHTSCEEEECSCHHHHHHHHHHC--SSCCEE--
T ss_pred HHHHHHHHHH-HCCCCEEEECCCC--CCCCHHHHHHHHHHHHHHhhhcCCCeEEEeCCCHHHHHHHHHhc--CCCCEE--
Confidence 3455555666 7899998876532 22234677888877665 35899998887766665554332 233111
Q ss_pred ccccCChHHHHHHHHHHHHHHHhcCCCEEEEeC
Q 020079 259 HALSRPPLLEGEATTRAIRLAEFVNTPLYVVHV 291 (331)
Q Consensus 259 ~~~~~~~~~e~~~i~~~~~l~~~~g~~~~i~H~ 291 (331)
........ ...+++.+.+++++|+++.+.|.
T Consensus 111 -NdIs~~~~-d~~~~~~~~l~a~~ga~vV~mh~ 141 (300)
T 3k13_A 111 -NSISLKEG-EEVFLEHARIIKQYGAATVVMAF 141 (300)
T ss_dssp -EEECSTTC-HHHHHHHHHHHHHHTCEEEEESE
T ss_pred -EeCCcccC-ChhHHHHHHHHHHhCCeEEEEee
Confidence 10011000 12344678899999999999997
No 223
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=57.59 E-value=55 Score=28.40 Aligned_cols=96 Identities=15% Similarity=0.058 Sum_probs=45.8
Q ss_pred HhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHc---CCcEEEEcC-CchhhHHHHHHHHHcCCCCccccc--ccCChHH
Q 020079 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAE-NGDAVFEGQKRMIELGITGPEGHA--LSRPPLL 267 (331)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~---g~~v~~H~e-~~~~~~~~~~~~~~~G~~~~~~~~--~~~~~~~ 267 (331)
+.|++++-+..+.......+.++-+++++.+.+. .+|+.+++. +..+.-+..+...+.|..+--... ...| .
T Consensus 44 ~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpViaGvg~~t~~ai~la~~A~~~Gadavlv~~P~y~~~-s- 121 (316)
T 3e96_A 44 DNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVAGIGYATSTAIELGNAAKAAGADAVMIHMPIHPYV-T- 121 (316)
T ss_dssp TTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECSSHHHHHHHHHHHHHHTCSEEEECCCCCSCC-C-
T ss_pred HcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEEeCcCHHHHHHHHHHHHhcCCCEEEEcCCCCCCC-C-
Confidence 5677766322222223455666666666655443 467777753 333332333445666654321100 0112 1
Q ss_pred HHHHHHHHHHHHHhcCCCEEEEeC
Q 020079 268 EGEATTRAIRLAEFVNTPLYVVHV 291 (331)
Q Consensus 268 e~~~i~~~~~l~~~~g~~~~i~H~ 291 (331)
+...++-+-.++...+.++.+-+.
T Consensus 122 ~~~l~~~f~~va~a~~lPiilYn~ 145 (316)
T 3e96_A 122 AGGVYAYFRDIIEALDFPSLVYFK 145 (316)
T ss_dssp HHHHHHHHHHHHHHHTSCEEEEEC
T ss_pred HHHHHHHHHHHHHhCCCCEEEEeC
Confidence 122334444555566778777764
No 224
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=57.44 E-value=81 Score=27.19 Aligned_cols=97 Identities=13% Similarity=0.094 Sum_probs=57.1
Q ss_pred HhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHc---CCcEEEEc--CCchhhHHHHHHHHHcCCCCcc----cccccCC
Q 020079 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHA--ENGDAVFEGQKRMIELGITGPE----GHALSRP 264 (331)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~---g~~v~~H~--e~~~~~~~~~~~~~~~G~~~~~----~~~~~~~ 264 (331)
+.|++++-+..+.......+.++-+++++.+.+. .+++.+|+ .+..+.-+..+...+.|..+-- .+....+
T Consensus 46 ~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~~ 125 (307)
T 3s5o_A 46 TFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGSGCESTQATVEMTVSMAQVGADAAMVVTPCYYRGRM 125 (307)
T ss_dssp TSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCTTGGGC
T ss_pred HcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCCCcCCCCC
Confidence 5788877543333334567888888888877664 57888886 3444444444667777775421 1111111
Q ss_pred hHHHHHHHHHHHHHHHhcCCCEEEEeCC
Q 020079 265 PLLEGEATTRAIRLAEFVNTPLYVVHVM 292 (331)
Q Consensus 265 ~~~e~~~i~~~~~l~~~~g~~~~i~H~~ 292 (331)
.+...++-+-.++...+.++.+-+++
T Consensus 126 --s~~~l~~~f~~ia~a~~lPiilYn~P 151 (307)
T 3s5o_A 126 --SSAALIHHYTKVADLSPIPVVLYSVP 151 (307)
T ss_dssp --CHHHHHHHHHHHHHHCSSCEEEEECH
T ss_pred --CHHHHHHHHHHHHhhcCCCEEEEeCC
Confidence 12233444556666778898888875
No 225
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=56.94 E-value=97 Score=26.79 Aligned_cols=109 Identities=8% Similarity=-0.070 Sum_probs=57.4
Q ss_pred CCCChhhHHHHHHHHHhCCceEEecCcCCCCC---cHHH---HHHHHHHHh-ccceeeccccccccCCChhhHHHHHHHH
Q 020079 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTA---GFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMV 192 (331)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (331)
+..+.+.+....+..+.+|+..++-.++.+.. +..+ .++...+.. .+.++-. . ......+..+..+...
T Consensus 28 g~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpVia--G--vg~st~~ai~la~~A~ 103 (314)
T 3d0c_A 28 REIDWKGLDDNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVA--G--IGYSVDTAIELGKSAI 103 (314)
T ss_dssp CCBCHHHHHHHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEE--E--ECSSHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCeEEe--c--CCcCHHHHHHHHHHHH
Confidence 34566667777778899999998855443322 2222 233333322 2222221 1 2222234444444433
Q ss_pred HHhCCCeEEEEEecCCCCcCCHHHHHH-HHHHHHHcCCcEEEEc
Q 020079 193 KEKGINSFKFFMAYKGSFMINDELLIE-GFKRCKSLGALAMVHA 235 (331)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~-~~~~A~~~g~~v~~H~ 235 (331)
+.|++++-+.. | .-...+++.+.+ .-+.|...++|+.++.
T Consensus 104 -~~Gadavlv~~-P-~y~~~s~~~l~~~f~~va~a~~lPiilYn 144 (314)
T 3d0c_A 104 -DSGADCVMIHQ-P-VHPYITDAGAVEYYRNIIEALDAPSIIYF 144 (314)
T ss_dssp -HTTCSEEEECC-C-CCSCCCHHHHHHHHHHHHHHSSSCEEEEE
T ss_pred -HcCCCEEEECC-C-CCCCCCHHHHHHHHHHHHHhCCCCEEEEe
Confidence 68999875432 1 112235565554 4456777799998875
No 226
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=56.65 E-value=49 Score=28.33 Aligned_cols=97 Identities=14% Similarity=0.098 Sum_probs=53.2
Q ss_pred HhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHc---CCcEEEEcC--CchhhHHHHHHHHHcCCCCccccc--ccCChH
Q 020079 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAE--NGDAVFEGQKRMIELGITGPEGHA--LSRPPL 266 (331)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~---g~~v~~H~e--~~~~~~~~~~~~~~~G~~~~~~~~--~~~~~~ 266 (331)
+.|++++-+..+.......+.++-+++++.+.+. .+|+.+++. +..+.-+..+...+.|..+--... ...| .
T Consensus 33 ~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~-s 111 (292)
T 2ojp_A 33 ASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLTVTPYYNRP-S 111 (292)
T ss_dssp HHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHTTTSSCSEEEEECCCSSCC-C
T ss_pred HcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHhcCCCEEEECCCCCCCC-C
Confidence 6788887543322334567777777777766543 478888863 333333333445566654321100 0122 1
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEeCC
Q 020079 267 LEGEATTRAIRLAEFVNTPLYVVHVM 292 (331)
Q Consensus 267 ~e~~~i~~~~~l~~~~g~~~~i~H~~ 292 (331)
+...++-+-.++...+.++.+-+++
T Consensus 112 -~~~l~~~f~~ia~a~~lPiilYn~P 136 (292)
T 2ojp_A 112 -QEGLYQHFKAIAEHTDLPQILYNVP 136 (292)
T ss_dssp -HHHHHHHHHHHHTTCSSCEEEECCH
T ss_pred -HHHHHHHHHHHHHhcCCCEEEEeCc
Confidence 2233344445666678898888865
No 227
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=56.56 E-value=94 Score=26.52 Aligned_cols=110 Identities=7% Similarity=-0.095 Sum_probs=55.5
Q ss_pred CCCChhhHHHHHHHHHh-CCceEEecCcCCCCC---cHHH---HHHHHHHHh-ccceeeccccccccCCChhhHHHHHHH
Q 020079 120 GSETIDDFFSGQAAALA-GGTTMHIDFVIPING---SLTA---GFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVM 191 (331)
Q Consensus 120 ~~~~~~~~~~~~~~~l~-~GvTtv~d~~~~~~~---~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (331)
+..+.+.+....+..+. +||..++-.++.+.. +..+ .++...+.. .+.++-. ..+.. ...+..+..+..
T Consensus 19 g~iD~~~l~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia--Gvg~~-~t~~ai~la~~a 95 (293)
T 1f6k_A 19 GTINEKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIA--QVGSV-NLKEAVELGKYA 95 (293)
T ss_dssp SCBCHHHHHHHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEE--ECCCS-CHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEE--ecCCC-CHHHHHHHHHHH
Confidence 34556667777777888 999988755433322 2222 233333322 1222211 11111 223344444433
Q ss_pred HHHhCCCeEEEEEecCCCCcCCHHHHHH-HHHHHHHcCCcEEEEc
Q 020079 192 VKEKGINSFKFFMAYKGSFMINDELLIE-GFKRCKSLGALAMVHA 235 (331)
Q Consensus 192 ~~~~g~~~ik~~~~~~~~~~~~~~~l~~-~~~~A~~~g~~v~~H~ 235 (331)
. +.|++++-+..-+ -...+++.+.+ .-+.|+..++|+.++.
T Consensus 96 ~-~~Gadavlv~~P~--y~~~~~~~l~~~f~~va~a~~lPiilYn 137 (293)
T 1f6k_A 96 T-ELGYDCLSAVTPF--YYKFSFPEIKHYYDTIIAETGSNMIVYS 137 (293)
T ss_dssp H-HHTCSEEEEECCC--SSCCCHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred H-hcCCCEEEECCCC--CCCCCHHHHHHHHHHHHHhCCCCEEEEE
Confidence 3 6799987554221 11235555544 4455666789998873
No 228
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=56.35 E-value=95 Score=26.52 Aligned_cols=109 Identities=15% Similarity=0.134 Sum_probs=56.8
Q ss_pred CCCChhhHHHHHHHHHhCCceEEecCcCCCCC---cHHHH---HHHHHHHhc-cceeeccccccccC-CChhhHHHHHHH
Q 020079 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTAG---FEAYEKKAK-NSCMDYGFHMAITK-WDEVVSDEMEVM 191 (331)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~ 191 (331)
+..+.+.+....+..+.+|+..++-.+..+.. +..+. ++...+... +.++ ..+... ...+..+..+..
T Consensus 19 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pv----iaGvg~~~t~~ai~la~~A 94 (294)
T 3b4u_A 19 GTVDIDAMIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRI----VTGVLVDSIEDAADQSAEA 94 (294)
T ss_dssp SSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGE----EEEECCSSHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcE----EEeCCCccHHHHHHHHHHH
Confidence 34556667777778899999998755543322 23232 233332221 2221 112222 223344444433
Q ss_pred HHHhCCCeEEEEEecCCCCc-CCHHHHHHHH-HHHHHc---CCcEEEEc
Q 020079 192 VKEKGINSFKFFMAYKGSFM-INDELLIEGF-KRCKSL---GALAMVHA 235 (331)
Q Consensus 192 ~~~~g~~~ik~~~~~~~~~~-~~~~~l~~~~-~~A~~~---g~~v~~H~ 235 (331)
. +.|++++-+.. | .-.. .+++.+.+-+ +.|... ++|+.++.
T Consensus 95 ~-~~Gadavlv~~-P-~y~~~~s~~~l~~~f~~va~a~p~~~lPiilYn 140 (294)
T 3b4u_A 95 L-NAGARNILLAP-P-SYFKNVSDDGLFAWFSAVFSKIGKDARDILVYN 140 (294)
T ss_dssp H-HTTCSEEEECC-C-CSSCSCCHHHHHHHHHHHHHHHCTTCCCEEEEE
T ss_pred H-hcCCCEEEEcC-C-cCCCCCCHHHHHHHHHHHHHhcCCCCCcEEEEE
Confidence 3 68999875432 2 1122 3666655544 456666 89998873
No 229
>2zvr_A Uncharacterized protein TM_0416; hyperthermophIle, ketohexose 3-epimeras tagatose 3-epimerase, isomerase; 2.20A {Thermotoga maritima}
Probab=55.38 E-value=83 Score=26.33 Aligned_cols=44 Identities=9% Similarity=-0.084 Sum_probs=28.6
Q ss_pred HHHHHHHHhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcE-EEEc
Q 020079 187 EMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALA-MVHA 235 (331)
Q Consensus 187 ~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v-~~H~ 235 (331)
+..+.+.+.|.+++.+.... . ....++++.+.++++|+.+ .+|+
T Consensus 45 ~~l~~~~~~G~~~vEl~~~~--~---~~~~~~~~~~~l~~~gl~~~~~~~ 89 (290)
T 2zvr_A 45 KGMELAKRVGYQAVEIAVRD--P---SIVDWNEVKILSEELNLPICAIGT 89 (290)
T ss_dssp HHHHHHHHHTCSEEEEECSC--G---GGSCHHHHHHHHHHHTCCEEEEEC
T ss_pred HHHHHHHHhCCCEEEEcCCC--c---chhhHHHHHHHHHHcCCeEEEEec
Confidence 33334447899998775431 1 1244567777788899998 7786
No 230
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=54.80 E-value=1e+02 Score=26.54 Aligned_cols=107 Identities=9% Similarity=-0.039 Sum_probs=56.8
Q ss_pred CCCChhhHHHHHHHHHhCCceEEecCcCCCCC---cHHH---HHHHHHHHhccceeeccccccccC-CChhhHHHHHHHH
Q 020079 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTA---GFEAYEKKAKNSCMDYGFHMAITK-WDEVVSDEMEVMV 192 (331)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 192 (331)
+..+.+.+....+..+.+||..++-.++.+.. +..+ .++...+...+.++- .+... ...+..+..+...
T Consensus 24 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~grvpVi----aGvg~~~t~~ai~la~~A~ 99 (313)
T 3dz1_A 24 GKIDDVSIDRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRAKSMQVI----VGVSAPGFAAMRRLARLSM 99 (313)
T ss_dssp SCBCHHHHHHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHCTTSEEE----EECCCSSHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHcCCCcEE----EecCCCCHHHHHHHHHHHH
Confidence 34556677777788899999988755443322 2222 333333332222221 12221 2233444444443
Q ss_pred HHhCCCeEEEEEecCCCCcCCHHHHHH-HHHHHHHcC--CcEEEE
Q 020079 193 KEKGINSFKFFMAYKGSFMINDELLIE-GFKRCKSLG--ALAMVH 234 (331)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~-~~~~A~~~g--~~v~~H 234 (331)
+.|++++-+. .|. +..+++.+.+ ..+.|...+ +|+.+.
T Consensus 100 -~~Gadavlv~-~P~--~~~s~~~l~~~f~~va~a~~~~lPiilY 140 (313)
T 3dz1_A 100 -DAGAAGVMIA-PPP--SLRTDEQITTYFRQATEAIGDDVPWVLQ 140 (313)
T ss_dssp -HHTCSEEEEC-CCT--TCCSHHHHHHHHHHHHHHHCTTSCEEEE
T ss_pred -HcCCCEEEEC-CCC--CCCCHHHHHHHHHHHHHhCCCCCcEEEE
Confidence 6899988553 232 2346665555 445566667 999887
No 231
>3n2t_A Putative oxidoreductase; aldo/keto reductase superfamily, AKR, AKR11B4, TIM barrel; 2.00A {Gluconobacter oxydans} SCOP: c.1.7.0
Probab=54.38 E-value=1.1e+02 Score=26.71 Aligned_cols=112 Identities=11% Similarity=-0.006 Sum_probs=56.5
Q ss_pred CChhhHHHHHHHHHhCCceEEecCcCCCCCcHHHHHHHHHHHhcc--ceee--ccccc--cc--------cCCChhhHHH
Q 020079 122 ETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKN--SCMD--YGFHM--AI--------TKWDEVVSDE 187 (331)
Q Consensus 122 ~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~--~~~~--~~~~~--~~--------~~~~~~~~~~ 187 (331)
...+......+.++..|++.+=....+..+...+.+-.+.+. .+ ..+. ++... .. ....+...+.
T Consensus 49 ~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~-~R~~v~I~TK~g~~~~~~~~~~~~~~~~~~~~~i~~~ 127 (348)
T 3n2t_A 49 PDDDNGVRTIHAALDEGINLIDTAPVYGFGHSEEIVGRALAE-KPNKAHVATKLGLHWVGEDEKNMKVFRDSRPARIRKE 127 (348)
T ss_dssp TTHHHHHHHHHHHHHTTCCEEECCTTGGGGHHHHHHHHHHHH-SCCCCEEEEEECEEEESSSTTTCEEEECCCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEChhhcCCChHHHHHHHHHhh-CCCeEEEEEeecCCCcCCCcccccccCCCCHHHHHHH
Confidence 345667777888999999976422223222234444333322 22 1111 11100 00 0122334555
Q ss_pred HHHHHHHhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEE
Q 020079 188 MEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVH 234 (331)
Q Consensus 188 ~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H 234 (331)
+++-.++-|.+.+.+++--......+.++..+.++.+++.|+.-.+=
T Consensus 128 ~e~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iG 174 (348)
T 3n2t_A 128 VEDSLRRLRVETIDLEQIHWPDDKTPIDESARELQKLHQDGKIRALG 174 (348)
T ss_dssp HHHHHHHHTCSSEEEEEESSCCTTSCHHHHHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHHhCCCcEEEEEecCCCCCCCHHHHHHHHHHHHHhCcceEEe
Confidence 66655567888887765321122234555666677777777754444
No 232
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=54.35 E-value=71 Score=26.41 Aligned_cols=110 Identities=11% Similarity=0.118 Sum_probs=63.1
Q ss_pred CChhhHHHHHHHHHhCCceEEecCcCCCCCcHHHHHHHHHHHhccceeeccccccccCCChhhHHHHHHHHHHhCCCeEE
Q 020079 122 ETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFK 201 (331)
Q Consensus 122 ~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik 201 (331)
.++++.....+.++.+|++.+.-- .......+.++..++..+...+.. +.. .+ .+.++... +.|++.+-
T Consensus 43 ~~~~~a~~~a~al~~gGi~~iEvt--~~t~~a~e~I~~l~~~~~~~~iGa----GTV-lt---~~~a~~Ai-~AGA~fIv 111 (232)
T 4e38_A 43 DNAEDIIPLGKVLAENGLPAAEIT--FRSDAAVEAIRLLRQAQPEMLIGA----GTI-LN---GEQALAAK-EAGATFVV 111 (232)
T ss_dssp SSGGGHHHHHHHHHHTTCCEEEEE--TTSTTHHHHHHHHHHHCTTCEEEE----ECC-CS---HHHHHHHH-HHTCSEEE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEe--CCCCCHHHHHHHHHHhCCCCEEeE----CCc-CC---HHHHHHHH-HcCCCEEE
Confidence 456677777888999999988621 111234566666655443322221 111 11 34555566 78988772
Q ss_pred EEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHHHcCCCCcc
Q 020079 202 FFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPE 257 (331)
Q Consensus 202 ~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~~~G~~~~~ 257 (331)
.| ..+++ +++.++++|+++..=+.++.++... .+.|..--.
T Consensus 112 ---sP----~~~~~----vi~~~~~~gi~~ipGv~TptEi~~A----~~~Gad~vK 152 (232)
T 4e38_A 112 ---SP----GFNPN----TVRACQEIGIDIVPGVNNPSTVEAA----LEMGLTTLK 152 (232)
T ss_dssp ---CS----SCCHH----HHHHHHHHTCEEECEECSHHHHHHH----HHTTCCEEE
T ss_pred ---eC----CCCHH----HHHHHHHcCCCEEcCCCCHHHHHHH----HHcCCCEEE
Confidence 32 23444 4456778899987767777766544 455654333
No 233
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=54.15 E-value=1e+02 Score=26.26 Aligned_cols=106 Identities=8% Similarity=-0.065 Sum_probs=53.2
Q ss_pred ChhhHHHHHHHHHhCCceEEecCcCCCCC---cHHH---HHHHHHHHh-ccceeeccccccccCCChhhHHHHHHHHHHh
Q 020079 123 TIDDFFSGQAAALAGGTTMHIDFVIPING---SLTA---GFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMVKEK 195 (331)
Q Consensus 123 ~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (331)
+.+.+....+..+.+||..++-.+..+.. +..+ .++...+.. .+.++-. ..+. ....+..+..+... +.
T Consensus 21 D~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpvia--Gvg~-~~t~~ai~la~~a~-~~ 96 (292)
T 3daq_A 21 NLEALKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIA--GTGT-NDTEKSIQASIQAK-AL 96 (292)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEE--ECCC-SCHHHHHHHHHHHH-HH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEE--eCCc-ccHHHHHHHHHHHH-Hc
Confidence 34555566677789999988755443322 2222 333333322 2222211 1111 12233444444443 67
Q ss_pred CCCeEEEEEecCCCCcCCHHHHHH-HHHHHHHcCCcEEEE
Q 020079 196 GINSFKFFMAYKGSFMINDELLIE-GFKRCKSLGALAMVH 234 (331)
Q Consensus 196 g~~~ik~~~~~~~~~~~~~~~l~~-~~~~A~~~g~~v~~H 234 (331)
|++++-+..-+- ...+++.+.+ .-+.|...++|+.+.
T Consensus 97 Gadavlv~~P~y--~~~~~~~l~~~f~~ia~a~~lPiilY 134 (292)
T 3daq_A 97 GADAIMLITPYY--NKTNQRGLVKHFEAIADAVKLPVVLY 134 (292)
T ss_dssp TCSEEEEECCCS--SCCCHHHHHHHHHHHHHHHCSCEEEE
T ss_pred CCCEEEECCCCC--CCCCHHHHHHHHHHHHHhCCCCEEEE
Confidence 999886542211 1235555444 445566669999887
No 234
>2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A*
Probab=54.10 E-value=25 Score=34.47 Aligned_cols=112 Identities=13% Similarity=0.059 Sum_probs=63.4
Q ss_pred ChhhHHHHHHHHHhCCceEEe----cCcCC----------------CCC-cHHHHHHHHHHHhccceeeccccccccCCC
Q 020079 123 TIDDFFSGQAAALAGGTTMHI----DFVIP----------------ING-SLTAGFEAYEKKAKNSCMDYGFHMAITKWD 181 (331)
Q Consensus 123 ~~~~~~~~~~~~l~~GvTtv~----d~~~~----------------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (331)
+.+....-...|.++|+-.+. |-+-. .+. +..+.++..+..+-...+-..........
T Consensus 369 nte~~K~YIDFAA~~G~eyvLveGwD~GW~~~~~~~~~~~fd~~~p~pd~Dl~eL~~YA~sKGV~iilw~~t~~~~~n~- 447 (738)
T 2d73_A 369 NTANVKRYIDFAAAHGFDAVLVEGWNEGWEDWFGNSKDYVFDFVTPYPDFDVKEIHRYAARKGIKMMMHHETSASVRNY- 447 (738)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEECSCBTTGGGCSSSCCSSCCCSSCBCTTCCHHHHHHHHHHTTCEEEEEEECTTBHHHH-
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEeccCCcccccCccccccccccccCCCCCHHHHHHHHHhCCCEEEEEEcCCCchhhH-
Confidence 455555556678889998776 33211 111 36666676666654433332222211111
Q ss_pred hhhHHHHHHHHHHhCCCeEEEEEe----cCCCC---cCCHHHHHHHHHHHHHcCCcEEEEc
Q 020079 182 EVVSDEMEVMVKEKGINSFKFFMA----YKGSF---MINDELLIEGFKRCKSLGALAMVHA 235 (331)
Q Consensus 182 ~~~~~~~~~~~~~~g~~~ik~~~~----~~~~~---~~~~~~l~~~~~~A~~~g~~v~~H~ 235 (331)
++.+++.-+++++.|+.++|+-+- +.... +...+....+++.|.++++.|..|-
T Consensus 448 e~~~d~~f~~~~~~Gv~GVKvdF~g~~~~r~~~h~~Q~~v~~Y~~i~~~AA~~~LmVnfHg 508 (738)
T 2d73_A 448 ERHMDKAYQFMADNGYNSVKSGYVGNIIPRGEHHYGQWMNNHYLYAVKKAADYKIMVNAHE 508 (738)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECCSSCBSTTCCTTSHHHHHHHHHHHHHHHHTTCEEEETT
T ss_pred HHHHHHHHHHHHHcCCCEEEeCccccCcCCcccccchHHHHHHHHHHHHHHHcCcEEEccC
Confidence 223343444455789999997432 22111 1123456789999999999999993
No 235
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=53.92 E-value=81 Score=26.90 Aligned_cols=110 Identities=9% Similarity=-0.086 Sum_probs=54.1
Q ss_pred CCCChhhHHHHHHHHHhCCceEEecCcCCCCC---cHHH---HHHHHHHHhc-cceeeccccccccCCChhhHHHHHHHH
Q 020079 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTA---GFEAYEKKAK-NSCMDYGFHMAITKWDEVVSDEMEVMV 192 (331)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (331)
+..+.+.+....+..+.+|+..++-.++.+.. +..+ .++...+... +.++-. ..+.. ...+..+..+..
T Consensus 17 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia--Gvg~~-~t~~ai~la~~a- 92 (292)
T 2ojp_A 17 GNVCRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIA--GTGAN-ATAEAISLTQRF- 92 (292)
T ss_dssp SCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE--ECCCS-SHHHHHHHHHHT-
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEE--ecCCc-cHHHHHHHHHHH-
Confidence 34556666677777888999988755443322 2222 2333333221 222211 11111 122333333332
Q ss_pred HHhCCCeEEEEEecCCCCcCCHHHHHHHH-HHHHHcCCcEEEEc
Q 020079 193 KEKGINSFKFFMAYKGSFMINDELLIEGF-KRCKSLGALAMVHA 235 (331)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~-~~A~~~g~~v~~H~ 235 (331)
++.|++++-+.. |. -...+++.+.+-+ +.|...++|+.++.
T Consensus 93 ~~~Gadavlv~~-P~-y~~~s~~~l~~~f~~ia~a~~lPiilYn 134 (292)
T 2ojp_A 93 NDSGIVGCLTVT-PY-YNRPSQEGLYQHFKAIAEHTDLPQILYN 134 (292)
T ss_dssp TTSSCSEEEEEC-CC-SSCCCHHHHHHHHHHHHTTCSSCEEEEC
T ss_pred HhcCCCEEEECC-CC-CCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 257888875432 21 1123566655544 45666689988873
No 236
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=53.73 E-value=1e+02 Score=26.15 Aligned_cols=95 Identities=14% Similarity=0.010 Sum_probs=54.2
Q ss_pred HhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEc--CCchhhHHHHHHHHHcCCCCc----ccccccC-ChH
Q 020079 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA--ENGDAVFEGQKRMIELGITGP----EGHALSR-PPL 266 (331)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~--e~~~~~~~~~~~~~~~G~~~~----~~~~~~~-~~~ 266 (331)
+.|++++-+..+.......+.++-+++++.+.+.-..+.+++ .+..+.-+..+...+.|..+- ..+. . | .
T Consensus 30 ~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~gvi~Gvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~--~~~-s 106 (286)
T 2r91_A 30 SKGVDVVFVAGTTGLGPALSLQEKMELTDAATSAARRVIVQVASLNADEAIALAKYAESRGAEAVASLPPYYF--PRL-S 106 (286)
T ss_dssp HTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHCSSEEEECCCSSHHHHHHHHHHHHHTTCSEEEECCSCSS--TTC-C
T ss_pred HCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCEEEeeCCCCHHHHHHHHHHHHhcCCCEEEEcCCcCC--CCC-C
Confidence 678888744322233456788888888887766522277775 334444444456677776532 1121 2 2 1
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEeCC
Q 020079 267 LEGEATTRAIRLAEFVNTPLYVVHVM 292 (331)
Q Consensus 267 ~e~~~i~~~~~l~~~~g~~~~i~H~~ 292 (331)
+...++-+-.++...+.++.+-+++
T Consensus 107 -~~~l~~~f~~va~a~~lPiilYn~P 131 (286)
T 2r91_A 107 -ERQIAKYFRDLCSAVSIPVFLYNYP 131 (286)
T ss_dssp -HHHHHHHHHHHHHHCSSCEEEEECH
T ss_pred -HHHHHHHHHHHHHhcCCCEEEEeCh
Confidence 1233344445666778898888865
No 237
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=53.72 E-value=30 Score=29.39 Aligned_cols=17 Identities=12% Similarity=0.145 Sum_probs=10.7
Q ss_pred HHHHHHHHHHHcCCcEE
Q 020079 216 LLIEGFKRCKSLGALAM 232 (331)
Q Consensus 216 ~l~~~~~~A~~~g~~v~ 232 (331)
.+++.++.|++.|.+..
T Consensus 106 ~~~~~i~~A~~lGa~~v 122 (296)
T 2g0w_A 106 KEQTTFHMARLFGVKHI 122 (296)
T ss_dssp HHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHHcCCCEE
Confidence 45666666777766643
No 238
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=53.50 E-value=1.2e+02 Score=29.82 Aligned_cols=124 Identities=9% Similarity=-0.021 Sum_probs=62.7
Q ss_pred HHHHHHHHhCCceEEecCcCCCCC-cHHHHHHHHHHHhccceeeccccc---c-cc-CCChhhHHHHHHHHHHhCCCeEE
Q 020079 128 FSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMDYGFHM---A-IT-KWDEVVSDEMEVMVKEKGINSFK 201 (331)
Q Consensus 128 ~~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~-~~-~~~~~~~~~~~~~~~~~g~~~ik 201 (331)
....+.++.+|+..++-+....+. .....++..++.+........+.. . .. ..+.+...++.+.+.+.|++.|.
T Consensus 200 ~~~i~~a~~~Gvd~irIf~s~n~l~~l~~~i~~ak~~G~~v~~~i~~~~d~~dp~r~~~~~e~~~~~a~~l~~~Ga~~I~ 279 (718)
T 3bg3_A 200 FKFCEVAKENGMDVFRVFDSLNYLPNMLLGMEAAGSAGGVVEAAISYTGDVADPSRTKYSLQYYMGLAEELVRAGTHILC 279 (718)
T ss_dssp HHHHHHHHHHTCCEEEEECSSCCHHHHHHHHHHHHTTTSEEEEEEECCSCTTCTTCCTTCHHHHHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHhcCcCEEEEEecHHHHHHHHHHHHHHHHcCCeEEEEEEeeccccCCCCCCCCHHHHHHHHHHHHHcCCCEEE
Confidence 445677788899887633222211 333344444444432222222210 1 10 11333333443333368998774
Q ss_pred EEEecCCCCcCCHHHHHHHHHHHHH-c-CCcEEEEcCCchhhHHHH-HHHHHcCCC
Q 020079 202 FFMAYKGSFMINDELLIEGFKRCKS-L-GALAMVHAENGDAVFEGQ-KRMIELGIT 254 (331)
Q Consensus 202 ~~~~~~~~~~~~~~~l~~~~~~A~~-~-g~~v~~H~e~~~~~~~~~-~~~~~~G~~ 254 (331)
+- +. .-...+..+.++++..++ . ++++.+|+.+.....-.. ....+.|..
T Consensus 280 l~-DT--~G~~~P~~v~~lV~~lk~~~p~~~I~~H~Hnd~GlAvANslaAveAGa~ 332 (718)
T 3bg3_A 280 IK-DM--AGLLKPTACTMLVSSLRDRFPDLPLHIHTHDTSGAGVAAMLACAQAGAD 332 (718)
T ss_dssp EE-CT--TSCCCHHHHHHHHHHHHHHSTTCCEEEECCCTTSCHHHHHHHHHHTTCS
T ss_pred Ec-Cc--CCCcCHHHHHHHHHHHHHhCCCCeEEEEECCCccHHHHHHHHHHHhCCC
Confidence 32 22 223567787777776654 4 789999997765543332 223455654
No 239
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=53.31 E-value=83 Score=26.24 Aligned_cols=56 Identities=13% Similarity=0.083 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHcCCc-EEEEcCCch------hhHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHHHhcCCCEE
Q 020079 215 ELLIEGFKRCKSLGAL-AMVHAENGD------AVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLY 287 (331)
Q Consensus 215 ~~l~~~~~~A~~~g~~-v~~H~e~~~------~~~~~~~~~~~~G~~~~~~~~~~~~~~~e~~~i~~~~~l~~~~g~~~~ 287 (331)
+.+++.++.|++.|.+ +.+|..... ..+...+.+ ...+.+..+++++.|+++.
T Consensus 104 ~~~~~~i~~a~~lGa~~v~~~~g~~~~~~~~p~~~~~~~~~--------------------~~~l~~l~~~a~~~Gv~l~ 163 (287)
T 3kws_A 104 DTMKEIIAAAGELGSTGVIIVPAFNGQVPALPHTMETRDFL--------------------CEQFNEMGTFAAQHGTSVI 163 (287)
T ss_dssp HHHHHHHHHHHHTTCSEEEECSCCTTCCSBCCSSHHHHHHH--------------------HHHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHHHcCCCEEEEecCcCCcCCCCCCHHHHHHHH--------------------HHHHHHHHHHHHHcCCEEE
Confidence 5678899999999997 455643110 111111111 2445667778888888876
Q ss_pred EEe
Q 020079 288 VVH 290 (331)
Q Consensus 288 i~H 290 (331)
+..
T Consensus 164 lE~ 166 (287)
T 3kws_A 164 FEP 166 (287)
T ss_dssp ECC
T ss_pred EEe
Confidence 653
No 240
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=53.28 E-value=1.1e+02 Score=26.32 Aligned_cols=112 Identities=6% Similarity=-0.146 Sum_probs=56.3
Q ss_pred CCCChhhHHHHHHHHHhCCceEEecCcCCCCC---cHHHH---HHHHHHHh-ccceeeccccccccCCChhhHHHHHHHH
Q 020079 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTAG---FEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMV 192 (331)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (331)
+..+.+.+....+..+.+||..++-.++.+.. +..+. ++...+.. .+.++-. ..+. ....+..+..+...
T Consensus 30 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia--Gvg~-~~t~~ai~la~~A~ 106 (307)
T 3s5o_A 30 AEVDYGKLEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLA--GSGC-ESTQATVEMTVSMA 106 (307)
T ss_dssp SCBCHHHHHHHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEE--ECCC-SSHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEE--ecCC-CCHHHHHHHHHHHH
Confidence 44566677777777889999988755443322 22232 23322221 1222111 1111 12233444444433
Q ss_pred HHhCCCeEEEEEecCCCCcCCHHHHHH-HHHHHHHcCCcEEEEc
Q 020079 193 KEKGINSFKFFMAYKGSFMINDELLIE-GFKRCKSLGALAMVHA 235 (331)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~-~~~~A~~~g~~v~~H~ 235 (331)
+.|++++-+..-+-.....+++.+.+ ..+.|...++|+.+..
T Consensus 107 -~~Gadavlv~~P~y~~~~~s~~~l~~~f~~ia~a~~lPiilYn 149 (307)
T 3s5o_A 107 -QVGADAAMVVTPCYYRGRMSSAALIHHYTKVADLSPIPVVLYS 149 (307)
T ss_dssp -HTTCSEEEEECCCTTGGGCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred -HcCCCEEEEcCCCcCCCCCCHHHHHHHHHHHHhhcCCCEEEEe
Confidence 68999876542111111135555544 4455667789998873
No 241
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=53.17 E-value=50 Score=28.25 Aligned_cols=97 Identities=11% Similarity=0.055 Sum_probs=49.4
Q ss_pred HhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHc---CCcEEEEcC--CchhhHHHHHHHHHcCCCCcccccc--cCChH
Q 020079 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAE--NGDAVFEGQKRMIELGITGPEGHAL--SRPPL 266 (331)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~---g~~v~~H~e--~~~~~~~~~~~~~~~G~~~~~~~~~--~~~~~ 266 (331)
+.|++++-+..+.......+.++-+++++.+.+. .+|+.+++. +..+.-+..+...+.|..+--.... ..| .
T Consensus 33 ~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~-s 111 (291)
T 3a5f_A 33 KSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIAGTGSNNTAASIAMSKWAESIGVDGLLVITPYYNKT-T 111 (291)
T ss_dssp HTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCC-C
T ss_pred HcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHhcCCCEEEEcCCCCCCC-C
Confidence 5788776443222334456777766666655442 477888853 3344434445566777654211000 112 1
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEeCC
Q 020079 267 LEGEATTRAIRLAEFVNTPLYVVHVM 292 (331)
Q Consensus 267 ~e~~~i~~~~~l~~~~g~~~~i~H~~ 292 (331)
+...++-+-.++...+.++.+-+++
T Consensus 112 -~~~l~~~f~~ia~a~~lPiilYn~P 136 (291)
T 3a5f_A 112 -QKGLVKHFKAVSDAVSTPIIIYNVP 136 (291)
T ss_dssp -HHHHHHHC-CTGGGCCSCEEEEECH
T ss_pred -HHHHHHHHHHHHHhcCCCEEEEeCc
Confidence 1122333334555567787777755
No 242
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=53.07 E-value=93 Score=25.43 Aligned_cols=127 Identities=13% Similarity=0.047 Sum_probs=62.9
Q ss_pred CCCChhhHHHHHHHHHhCCceEEecCcCCCCCcHHHHHHH-HHHHhccceeeccccccccCCChhhHHHHHHHHHHhCCC
Q 020079 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEA-YEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGIN 198 (331)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 198 (331)
...+.+++....+.+..+|+.+++-.. ........ +.....+...-..|+.+.. ..+....++++.+ +.|++
T Consensus 14 p~~t~~~i~~l~~~a~~~~~~aVcv~p-----~~v~~~~~~l~~~~v~v~~vigFP~G~~-~~~~k~~e~~~Ai-~~GAd 86 (220)
T 1ub3_A 14 PTATLEEVAKAAEEALEYGFYGLCIPP-----SYVAWVRARYPHAPFRLVTVVGFPLGYQ-EKEVKALEAALAC-ARGAD 86 (220)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEECCG-----GGHHHHHHHCTTCSSEEEEEESTTTCCS-CHHHHHHHHHHHH-HTTCS
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEECH-----HHHHHHHHHhCCCCceEEEEecCCCCCC-chHHHHHHHHHHH-HcCCC
Confidence 345788888888999999999987321 11222111 1110111111112222211 2233456677777 78999
Q ss_pred eEEEEEecCC----CCcCCHHHHHHHHHHHHHcCCcEEEE-c-CCchhhHHHHHHHHHcCC
Q 020079 199 SFKFFMAYKG----SFMINDELLIEGFKRCKSLGALAMVH-A-ENGDAVFEGQKRMIELGI 253 (331)
Q Consensus 199 ~ik~~~~~~~----~~~~~~~~l~~~~~~A~~~g~~v~~H-~-e~~~~~~~~~~~~~~~G~ 253 (331)
.+.+.++... .+..-.+++.++.+.+++..+++..- + -+++++....+...+.|.
T Consensus 87 evd~vinig~~~~g~~~~v~~ei~~v~~a~~~~~lkvIlet~~l~~e~i~~a~~ia~eaGA 147 (220)
T 1ub3_A 87 EVDMVLHLGRAKAGDLDYLEAEVRAVREAVPQAVLKVILETGYFSPEEIARLAEAAIRGGA 147 (220)
T ss_dssp EEEEECCHHHHHTTCHHHHHHHHHHHHHHSTTSEEEEECCGGGSCHHHHHHHHHHHHHHTC
T ss_pred EEEecccchhhhCCCHHHHHHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhCC
Confidence 9988765431 11112345556666665545554432 1 123333333344455554
No 243
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=52.36 E-value=93 Score=26.83 Aligned_cols=69 Identities=13% Similarity=0.080 Sum_probs=41.4
Q ss_pred hhHHHHHHHHHHhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHc--CCcEEEEcCCchhhHHHH-HHHHHcCCC
Q 020079 183 VVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL--GALAMVHAENGDAVFEGQ-KRMIELGIT 254 (331)
Q Consensus 183 ~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~--g~~v~~H~e~~~~~~~~~-~~~~~~G~~ 254 (331)
+...++.+.+.+.|++.|.+- +..+ ..+++.+.++++..++. ++++.+|+.++....... ....+.|..
T Consensus 157 ~~~~~~~~~~~~~Ga~~i~l~-DT~G--~~~P~~v~~lv~~l~~~~~~~~l~~H~Hnd~Gla~AN~laAv~aGa~ 228 (307)
T 1ydo_A 157 EQVIRLSEALFEFGISELSLG-DTIG--AANPAQVETVLEALLARFPANQIALHFHDTRGTALANMVTALQMGIT 228 (307)
T ss_dssp HHHHHHHHHHHHHTCSCEEEE-CSSC--CCCHHHHHHHHHHHHTTSCGGGEEEECBGGGSCHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHhcCCCEEEEc-CCCC--CcCHHHHHHHHHHHHHhCCCCeEEEEECCCCchHHHHHHHHHHhCCC
Confidence 333444343337899877543 2222 35788888888887665 578999997765543332 223455654
No 244
>2qw5_A Xylose isomerase-like TIM barrel; putative sugar phosphate isomerase/epimerase; 1.78A {Anabaena variabilis atcc 29413}
Probab=52.09 E-value=88 Score=26.87 Aligned_cols=46 Identities=15% Similarity=-0.007 Sum_probs=29.3
Q ss_pred HHHHHHHHhCCCeEEEEEecCCCC--cCCHHHHHHHHHHHHHcCCc---EEE
Q 020079 187 EMEVMVKEKGINSFKFFMAYKGSF--MINDELLIEGFKRCKSLGAL---AMV 233 (331)
Q Consensus 187 ~~~~~~~~~g~~~ik~~~~~~~~~--~~~~~~l~~~~~~A~~~g~~---v~~ 233 (331)
.++.+. +.|.+++.+........ ..+.+.++++.+.++++|+. +..
T Consensus 36 ~l~~~~-~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~l~~~gL~~~~i~~ 86 (335)
T 2qw5_A 36 HIKKLQ-RFGYSGFEFPIAPGLPENYAQDLENYTNLRHYLDSEGLENVKIST 86 (335)
T ss_dssp HHHHHH-HTTCCEEEEECCCCCGGGHHHHHHHHHHHHHHHHHTTCTTCEEEE
T ss_pred HHHHHH-HhCCCEEEEecCCCcccccccchHHHHHHHHHHHHCCCCcceeEE
Confidence 343443 78999998764321111 11236788888999999999 774
No 245
>3ayv_A Putative uncharacterized protein TTHB071; structural genomics, riken structural genomics/proteomics in RSGI, TIM barrel, unknown function; 1.85A {Thermus thermophilus} PDB: 3ayt_A
Probab=51.77 E-value=96 Score=25.24 Aligned_cols=16 Identities=19% Similarity=0.196 Sum_probs=7.0
Q ss_pred HHHHHHHhcCCCEEEE
Q 020079 274 RAIRLAEFVNTPLYVV 289 (331)
Q Consensus 274 ~~~~l~~~~g~~~~i~ 289 (331)
+..+.+++.|+++.+.
T Consensus 121 ~l~~~a~~~gv~l~lE 136 (254)
T 3ayv_A 121 LVVRRARTLGVRLLLE 136 (254)
T ss_dssp HHHHHHHHHTCEEEEE
T ss_pred HHHHHHhhcCCEEEEc
Confidence 3444444445544333
No 246
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=51.72 E-value=26 Score=29.27 Aligned_cols=21 Identities=0% Similarity=-0.260 Sum_probs=14.2
Q ss_pred HHHHHHHHHHHhcCCCEEEEe
Q 020079 270 EATTRAIRLAEFVNTPLYVVH 290 (331)
Q Consensus 270 ~~i~~~~~l~~~~g~~~~i~H 290 (331)
..+.+..+.+++.|+++.+..
T Consensus 122 ~~l~~l~~~a~~~Gv~l~lE~ 142 (281)
T 3u0h_A 122 RRIRQVAVELLPLGMRVGLEY 142 (281)
T ss_dssp HHHHHHHHHHGGGTCEEEEEC
T ss_pred HHHHHHHHHHHHcCCEEEEEe
Confidence 445666777778888776654
No 247
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=51.35 E-value=1e+02 Score=25.32 Aligned_cols=46 Identities=11% Similarity=0.032 Sum_probs=28.2
Q ss_pred HHHhCCCeEEEEEecCCCCcCC--------HHHHHHHHHHHHHcCCcEEEEcCC
Q 020079 192 VKEKGINSFKFFMAYKGSFMIN--------DELLIEGFKRCKSLGALAMVHAEN 237 (331)
Q Consensus 192 ~~~~g~~~ik~~~~~~~~~~~~--------~~~l~~~~~~A~~~g~~v~~H~e~ 237 (331)
+..-|+..+.+..+.......+ .+.++++.+.|+++|+.+.+|...
T Consensus 92 a~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lE~~~ 145 (275)
T 3qc0_A 92 AAELGADCLVLVAGGLPGGSKNIDAARRMVVEGIAAVLPHARAAGVPLAIEPLH 145 (275)
T ss_dssp HHHTTCSCEEEECBCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEECCCC
T ss_pred HHHhCCCEEEEeeCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHcCCEEEEeECC
Confidence 3346887776654322111112 355778888899999998888643
No 248
>2yb1_A Amidohydrolase; HET: AMP; 1.90A {Chromobacterium violaceum} PDB: 2yb4_A
Probab=51.08 E-value=11 Score=32.39 Aligned_cols=33 Identities=24% Similarity=0.196 Sum_probs=25.8
Q ss_pred cccccccccCCCCCCCChhhHHHHHHHHHhCCceEEe
Q 020079 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHI 143 (331)
Q Consensus 107 ~ID~H~H~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~ 143 (331)
++|.|+|...+ -|..+++++ .+.+.+.|++.+.
T Consensus 3 ~~DLH~Ht~~S-Dg~~~~~el---v~~A~~~Gl~~ia 35 (292)
T 2yb1_A 3 NIDLHFHSRTS-DGALTPTEV---IDRAAARAPALLA 35 (292)
T ss_dssp CEECCBCCTTT-TCSSCHHHH---HHHHHTTCCSEEE
T ss_pred ccccccCCCcc-CCCCCHHHH---HHHHHHCCCCEEE
Confidence 68999999876 455666665 7778899998776
No 249
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=50.58 E-value=1e+02 Score=25.28 Aligned_cols=93 Identities=12% Similarity=0.027 Sum_probs=49.1
Q ss_pred HHHHHHHHHhCCCeEEE-EEecCCCCc--CCHHHHHHHHHHHHHcCCcEEEEc--CCchhhHHHHHHHHHcCCCCccccc
Q 020079 186 DEMEVMVKEKGINSFKF-FMAYKGSFM--INDELLIEGFKRCKSLGALAMVHA--ENGDAVFEGQKRMIELGITGPEGHA 260 (331)
Q Consensus 186 ~~~~~~~~~~g~~~ik~-~~~~~~~~~--~~~~~l~~~~~~A~~~g~~v~~H~--e~~~~~~~~~~~~~~~G~~~~~~~~ 260 (331)
++++.+ +.|++.+.+ .++.+..+. ...+.++++.+. .++++.+|. ++++. .
T Consensus 17 ~~i~~~--~~gad~lHvDvmDG~fvpn~t~G~~~v~~lr~~---~~~~~dvhLmv~dp~~---~---------------- 72 (231)
T 3ctl_A 17 EQIEFI--DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKL---ATKPLDCHLMVTRPQD---Y---------------- 72 (231)
T ss_dssp HHHHHH--HTTCSCEEEEEECSSSSSCCCBCHHHHHHHHTT---CCSCEEEEEESSCGGG---T----------------
T ss_pred HHHHHH--HcCCCEEEEEEEeCccCccchhcHHHHHHHHhc---cCCcEEEEEEecCHHH---H----------------
Confidence 444444 678887533 234443333 345555555332 378999994 54422 1
Q ss_pred ccCChHHHHHHHHHHHHHHHhcCCCEEEEeCCC-H-HHHHHHHHHHHcCCCEEEecCCc
Q 020079 261 LSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMS-M-DAMEEIAKARKAGPNFLNTTIPL 317 (331)
Q Consensus 261 ~~~~~~~e~~~i~~~~~l~~~~g~~~~i~H~~~-~-~~~~~i~~~~~~Gi~v~~~~~p~ 317 (331)
++.+.+.|+.....|.-. . ...+.++.+|+.|..+.+..+|.
T Consensus 73 ---------------i~~~~~aGAd~itvh~Ea~~~~~~~~i~~i~~~G~k~gv~lnp~ 116 (231)
T 3ctl_A 73 ---------------IAQLARAGADFITLHPETINGQAFRLIDEIRRHDMKVGLILNPE 116 (231)
T ss_dssp ---------------HHHHHHHTCSEEEECGGGCTTTHHHHHHHHHHTTCEEEEEECTT
T ss_pred ---------------HHHHHHcCCCEEEECcccCCccHHHHHHHHHHcCCeEEEEEECC
Confidence 123334566655556422 1 12345666677777766666665
No 250
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=50.03 E-value=1.3e+02 Score=26.28 Aligned_cols=105 Identities=8% Similarity=-0.038 Sum_probs=0.0
Q ss_pred HHHHHHHHhCCceEEecCcCCCCC-cHHHHHHHHHHHhccceeeccccccccCCChhhHHHHHHHHHHhCCCeEEEEEec
Q 020079 128 FSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAY 206 (331)
Q Consensus 128 ~~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~ 206 (331)
....+.+..+|+..++-....... ...+.++..++.+........ .....+.+...++.+...+.|+..+.+ .
T Consensus 96 ~~~i~~a~~aGvd~v~I~~~~s~~~~~~~~i~~ak~~G~~v~~~~~---~a~~~~~e~~~~ia~~~~~~Ga~~i~l---~ 169 (345)
T 1nvm_A 96 VHDLKNAYQAGARVVRVATHCTEADVSKQHIEYARNLGMDTVGFLM---MSHMIPAEKLAEQGKLMESYGATCIYM---A 169 (345)
T ss_dssp HHHHHHHHHHTCCEEEEEEETTCGGGGHHHHHHHHHHTCEEEEEEE---STTSSCHHHHHHHHHHHHHHTCSEEEE---E
T ss_pred HHHHHHHHhCCcCEEEEEEeccHHHHHHHHHHHHHHCCCEEEEEEE---eCCCCCHHHHHHHHHHHHHCCCCEEEE---C
Q ss_pred CCCCcCCHHHHHHHHHHHHHc---CCcEEEEcCCc
Q 020079 207 KGSFMINDELLIEGFKRCKSL---GALAMVHAENG 238 (331)
Q Consensus 207 ~~~~~~~~~~l~~~~~~A~~~---g~~v~~H~e~~ 238 (331)
...-...++.+.++++..++. ++++.+|+.+.
T Consensus 170 DT~G~~~P~~v~~lv~~l~~~~~~~~pi~~H~Hn~ 204 (345)
T 1nvm_A 170 DSGGAMSMNDIRDRMRAFKAVLKPETQVGMHAHHN 204 (345)
T ss_dssp CTTCCCCHHHHHHHHHHHHHHSCTTSEEEEECBCT
T ss_pred CCcCccCHHHHHHHHHHHHHhcCCCceEEEEECCC
No 251
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=50.02 E-value=1.1e+02 Score=25.50 Aligned_cols=17 Identities=12% Similarity=-0.005 Sum_probs=8.7
Q ss_pred HHHHHHHHHhCCceEEe
Q 020079 127 FFSGQAAALAGGTTMHI 143 (331)
Q Consensus 127 ~~~~~~~~l~~GvTtv~ 143 (331)
+....+.+.+.|+..+-
T Consensus 32 ~~~~l~~~~~~G~~~iE 48 (295)
T 3cqj_A 32 WLERLQLAKTLGFDFVE 48 (295)
T ss_dssp HHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHhcCCCEEE
Confidence 33334555556666553
No 252
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=49.91 E-value=1.1e+02 Score=25.42 Aligned_cols=16 Identities=13% Similarity=-0.093 Sum_probs=9.6
Q ss_pred HHHHHHHHHHHHcCCc
Q 020079 215 ELLIEGFKRCKSLGAL 230 (331)
Q Consensus 215 ~~l~~~~~~A~~~g~~ 230 (331)
+.+++.++.|++.|.+
T Consensus 102 ~~~~~~i~~a~~lG~~ 117 (290)
T 3tva_A 102 AEMKEISDFASWVGCP 117 (290)
T ss_dssp HHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHcCCC
Confidence 4455666666666665
No 253
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=49.81 E-value=1.1e+02 Score=26.01 Aligned_cols=96 Identities=17% Similarity=0.063 Sum_probs=54.1
Q ss_pred HhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEcC--CchhhHHHHHHHHHcCCCCc----ccccccCChHH
Q 020079 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAE--NGDAVFEGQKRMIELGITGP----EGHALSRPPLL 267 (331)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e--~~~~~~~~~~~~~~~G~~~~----~~~~~~~~~~~ 267 (331)
+.|++++-+..+.......+.++-+++++.+.+.-..+.+++. +..+.-+..+...+.|..+- ..+.. .|..
T Consensus 31 ~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~gViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~-~~s~- 108 (288)
T 2nuw_A 31 EKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDVTHKLIFQVGSLNLNDVMELVKFSNEMDILGVSSHSPYYFP-RLPE- 108 (288)
T ss_dssp HTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTTCSCEEEECCCSCHHHHHHHHHHHHTSCCSEEEECCCCSSC-SCCH-
T ss_pred HcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCeEEeeCCCCHHHHHHHHHHHHhcCCCEEEEcCCcCCC-CCCH-
Confidence 6788887443222334567888888888887765222667753 34444444455677776542 12211 0221
Q ss_pred HHHHHHHHHHHHHhcCCCEEEEeCC
Q 020079 268 EGEATTRAIRLAEFVNTPLYVVHVM 292 (331)
Q Consensus 268 e~~~i~~~~~l~~~~g~~~~i~H~~ 292 (331)
...++-+-.++...+.++.+-+++
T Consensus 109 -~~l~~~f~~va~a~~lPiilYn~P 132 (288)
T 2nuw_A 109 -KFLAKYYEEIARISSHSLYIYNYP 132 (288)
T ss_dssp -HHHHHHHHHHHHHCCSCEEEEECH
T ss_pred -HHHHHHHHHHHHhcCCCEEEEECc
Confidence 223344445666778888888865
No 254
>3iv8_A N-acetylglucosamine-6-phosphate deacetylase; IDP01334, fruct phosphate, carbohydrate metabolism, hydrolase; HET: F6P; 2.53A {Vibrio cholerae} PDB: 3egj_A*
Probab=49.27 E-value=49 Score=29.64 Aligned_cols=51 Identities=18% Similarity=0.148 Sum_probs=23.3
Q ss_pred hHHHHHHHHHHhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHc-----CCcEEEEcCCch
Q 020079 184 VSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL-----GALAMVHAENGD 239 (331)
Q Consensus 184 ~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~-----g~~v~~H~e~~~ 239 (331)
.++.+.+...+.|+..+-... .+.+.+.+.+.++..++. ...+-+|.|.+-
T Consensus 79 ~l~~~~~a~~~~GvTt~l~t~-----~T~~~e~l~~al~~~~~~~~~~~~~ilGiHlEGPf 134 (381)
T 3iv8_A 79 TIDTMHKANLKSGCTSFLPTL-----ITSSDENMRQAIAAAREYQAKYPNQSLGLHLEGPY 134 (381)
T ss_dssp HHHHHHHHHHHTTEEEEEEEE-----ESCCHHHHHHHHHHHHHHHHHCSSSBCCEEEECSS
T ss_pred HHHHHHHHHHhCCcccccccc-----CCCCHHHHHHHHHHHHHHHhcCCCceeEeeccCcc
Confidence 344444433356766553322 123455555544433221 134566777653
No 255
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=49.23 E-value=1.1e+02 Score=25.07 Aligned_cols=45 Identities=13% Similarity=-0.133 Sum_probs=32.1
Q ss_pred hHHHHHHHHHHhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEcC
Q 020079 184 VSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAE 236 (331)
Q Consensus 184 ~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e 236 (331)
..+...+.+..-|+..+.+.. ..+.++++.+.|+++|+.+.+|..
T Consensus 92 ~~~~~i~~A~~lGa~~v~~~~--------~~~~~~~l~~~a~~~gv~l~~En~ 136 (262)
T 3p6l_A 92 DWEKMFKFAKAMDLEFITCEP--------ALSDWDLVEKLSKQYNIKISVHNH 136 (262)
T ss_dssp HHHHHHHHHHHTTCSEEEECC--------CGGGHHHHHHHHHHHTCEEEEECC
T ss_pred HHHHHHHHHHHcCCCEEEecC--------CHHHHHHHHHHHHHhCCEEEEEeC
Confidence 344444555467888776531 246788999999999999999964
No 256
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=48.66 E-value=1.2e+02 Score=25.23 Aligned_cols=20 Identities=0% Similarity=-0.081 Sum_probs=13.8
Q ss_pred HHHHHHHHHHcCCcEEEEcC
Q 020079 217 LIEGFKRCKSLGALAMVHAE 236 (331)
Q Consensus 217 l~~~~~~A~~~g~~v~~H~e 236 (331)
++++.+.|+++|+.+.+|..
T Consensus 125 l~~l~~~a~~~Gv~l~lE~~ 144 (286)
T 3dx5_A 125 IRMICELFAQHNMYVLLETH 144 (286)
T ss_dssp HHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHhCCEEEEecC
Confidence 34566677788888887753
No 257
>2ki0_A DS119; beta-alpha-beta, de novo protein; NMR {Synthetic}
Probab=48.49 E-value=15 Score=19.64 Aligned_cols=20 Identities=15% Similarity=-0.046 Sum_probs=17.8
Q ss_pred CHHHHHHHHHHHHHcCCcEE
Q 020079 213 NDELLIEGFKRCKSLGALAM 232 (331)
Q Consensus 213 ~~~~l~~~~~~A~~~g~~v~ 232 (331)
++++++.+.+.|++.++.+.
T Consensus 13 tpeelkklkeeakkanirvt 32 (36)
T 2ki0_A 13 TPEELKKLKEEAKKANIRVT 32 (36)
T ss_dssp CHHHHHHHHHHHHHHCCCCC
T ss_pred CHHHHHHHHHHHHhccEEEE
Confidence 68999999999999998764
No 258
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=48.38 E-value=78 Score=28.09 Aligned_cols=54 Identities=6% Similarity=-0.060 Sum_probs=32.0
Q ss_pred hHHHHHHHHHHhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHc---CCcEEEEcCC
Q 020079 184 VSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAEN 237 (331)
Q Consensus 184 ~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~---g~~v~~H~e~ 237 (331)
.++.+.+..-+.|++++-+..+.......+.++-+++++.+.+. .+|+.+++.+
T Consensus 81 al~~lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~ 137 (360)
T 4dpp_A 81 AYDDLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIGNTGS 137 (360)
T ss_dssp HHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCC
T ss_pred HHHHHHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhCCCCeEEEecCC
Confidence 33333333326899987543333334567787777777665443 4788888643
No 259
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=48.34 E-value=1.3e+02 Score=25.86 Aligned_cols=110 Identities=12% Similarity=-0.078 Sum_probs=54.4
Q ss_pred CCCChhhHHHHHHHHHhCCceEEecCcCCCCC---cHHH---HHHHHHHHh-ccceeeccccccccCCChhhHHHHHHHH
Q 020079 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTA---GFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMV 192 (331)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (331)
+..+.+.+....+..+.+|+..+.-.+..+.. +..+ .++...+.. .+.++-. ..+.. ...+..+..+...
T Consensus 23 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpVia--Gvg~~-~t~~ai~la~~A~ 99 (311)
T 3h5d_A 23 GSINFDAIPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIA--GVGTN-DTRDSIEFVKEVA 99 (311)
T ss_dssp SSBCTTHHHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEE--ECCCS-SHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE--eCCCc-CHHHHHHHHHHHH
Confidence 33556667777778889999988755543322 2222 233333322 1222211 11111 1233333333333
Q ss_pred HHhCC-CeEEEEEecCCCCcCCHHHHHH-HHHHHHHcCCcEEEEc
Q 020079 193 KEKGI-NSFKFFMAYKGSFMINDELLIE-GFKRCKSLGALAMVHA 235 (331)
Q Consensus 193 ~~~g~-~~ik~~~~~~~~~~~~~~~l~~-~~~~A~~~g~~v~~H~ 235 (331)
+.|. +++-+..-+ -...+++.+.+ .-+.|...++|+.++.
T Consensus 100 -~~Ga~davlv~~P~--y~~~s~~~l~~~f~~va~a~~lPiilYn 141 (311)
T 3h5d_A 100 -EFGGFAAGLAIVPY--YNKPSQEGMYQHFKAIADASDLPIIIYN 141 (311)
T ss_dssp -HSCCCSEEEEECCC--SSCCCHHHHHHHHHHHHHSCSSCEEEEE
T ss_pred -hcCCCcEEEEcCCC--CCCCCHHHHHHHHHHHHHhCCCCEEEEe
Confidence 5675 877543211 12235555544 4455666799998873
No 260
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=48.18 E-value=85 Score=26.75 Aligned_cols=108 Identities=8% Similarity=-0.031 Sum_probs=54.2
Q ss_pred CChhhHHHHHHHHHhCCceEEecCcCCCCC---cHH---HHHHHHHHHhc-cceeeccccccccCCChhhHHHHHHHHHH
Q 020079 122 ETIDDFFSGQAAALAGGTTMHIDFVIPING---SLT---AGFEAYEKKAK-NSCMDYGFHMAITKWDEVVSDEMEVMVKE 194 (331)
Q Consensus 122 ~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (331)
.+.+.+....+..+.+|+..++-.++.+.. +.. +.++...+... +.++-. ..+. ....+..+..+... +
T Consensus 19 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~--Gvg~-~~t~~ai~la~~a~-~ 94 (291)
T 3a5f_A 19 VDFDKLSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIA--GTGS-NNTAASIAMSKWAE-S 94 (291)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEE--ECCC-SSHHHHHHHHHHHH-H
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE--eCCc-ccHHHHHHHHHHHH-h
Confidence 556667677777889999988755433322 222 22333333221 222211 1111 12233344443333 6
Q ss_pred hCCCeEEEEEecCCCCcCCHHHHHHHH-HHHHHcCCcEEEEc
Q 020079 195 KGINSFKFFMAYKGSFMINDELLIEGF-KRCKSLGALAMVHA 235 (331)
Q Consensus 195 ~g~~~ik~~~~~~~~~~~~~~~l~~~~-~~A~~~g~~v~~H~ 235 (331)
.|++++-+..-+ -...+++.+.+-+ +.|...++|+..+.
T Consensus 95 ~Gadavlv~~P~--y~~~s~~~l~~~f~~ia~a~~lPiilYn 134 (291)
T 3a5f_A 95 IGVDGLLVITPY--YNKTTQKGLVKHFKAVSDAVSTPIIIYN 134 (291)
T ss_dssp TTCSEEEEECCC--SSCCCHHHHHHHC-CTGGGCCSCEEEEE
T ss_pred cCCCEEEEcCCC--CCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 899887554211 1123566555444 44566688888863
No 261
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=47.93 E-value=1.2e+02 Score=25.77 Aligned_cols=95 Identities=17% Similarity=0.084 Sum_probs=52.3
Q ss_pred HhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEcC--CchhhHHHHHHHHHcCCCCcc----cccccC-ChH
Q 020079 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAE--NGDAVFEGQKRMIELGITGPE----GHALSR-PPL 266 (331)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e--~~~~~~~~~~~~~~~G~~~~~----~~~~~~-~~~ 266 (331)
+.|++++-+..+.......+.++-+++++.+.+.-..+.+++. +..+.-+..+...+.|..+-- .+. . | .
T Consensus 31 ~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~~gviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~--~~~-s 107 (293)
T 1w3i_A 31 RKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVTNKIIFQVGGLNLDDAIRLAKLSKDFDIVGIASYAPYYY--PRM-S 107 (293)
T ss_dssp HTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTCSCEEEECCCSCHHHHHHHHHHGGGSCCSEEEEECCCSC--SSC-C
T ss_pred HcCCCEEEECccccChhhCCHHHHHHHHHHHHHHcCCEEEecCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCC--CCC-C
Confidence 5788877443222334567788888888877765222667753 334433334555666664321 111 1 2 1
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEeCC
Q 020079 267 LEGEATTRAIRLAEFVNTPLYVVHVM 292 (331)
Q Consensus 267 ~e~~~i~~~~~l~~~~g~~~~i~H~~ 292 (331)
+...++-+-.++...+.++.+-+++
T Consensus 108 -~~~l~~~f~~va~a~~lPiilYn~P 132 (293)
T 1w3i_A 108 -EKHLVKYFKTLCEVSPHPVYLYNYP 132 (293)
T ss_dssp -HHHHHHHHHHHHHHCSSCEEEEECH
T ss_pred -HHHHHHHHHHHHhhCCCCEEEEECc
Confidence 1223344445666678888888765
No 262
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=47.56 E-value=2.4e+02 Score=29.34 Aligned_cols=125 Identities=11% Similarity=0.008 Sum_probs=65.8
Q ss_pred HHHHHHHHHhCCceEEecCcCCCCC-cHHHHHHHHHHHhccceeeccccc---cc---cCCChhhHHHHHHHHHHhCCCe
Q 020079 127 FFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMDYGFHM---AI---TKWDEVVSDEMEVMVKEKGINS 199 (331)
Q Consensus 127 ~~~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~~---~~~~~~~~~~~~~~~~~~g~~~ 199 (331)
.....+.+..+|+..++-+....+. +.....+..++.+.......++.. +. ...+.+...++.+.+.+.|++.
T Consensus 629 ~~~~v~~a~~~Gvd~irif~~~sd~~~~~~~~~~~~e~g~~~~~~i~~~~~~~~pe~~~~~~~~~~~~~a~~~~~~Ga~~ 708 (1150)
T 3hbl_A 629 IHKFVQESAKAGIDVFRIFDSLNWVDQMKVANEAVQEAGKISEGTICYTGDILNPERSNIYTLEYYVKLAKELEREGFHI 708 (1150)
T ss_dssp HHHHHHHHHHTTCCEEEEECTTCCGGGGHHHHHHHHHTTCEEEEEEECCSCTTCTTTCSSSSHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHhCCcCEEEEEeeCCHHHHHHHHHHHHHHHhhheeEEEeecccccChhhcCCCCHHHHHHHHHHHHHcCCCe
Confidence 3445677888999887643322222 344455555555433222222221 11 1122333334434333789887
Q ss_pred EEEEEecCCCCcCCHHHHHHHHHHHHH-cCCcEEEEcCCchhhHHHH-HHHHHcCCC
Q 020079 200 FKFFMAYKGSFMINDELLIEGFKRCKS-LGALAMVHAENGDAVFEGQ-KRMIELGIT 254 (331)
Q Consensus 200 ik~~~~~~~~~~~~~~~l~~~~~~A~~-~g~~v~~H~e~~~~~~~~~-~~~~~~G~~ 254 (331)
|.+- +.. -...+..+.++++..++ .++++++|+++........ ....+.|..
T Consensus 709 i~l~-Dt~--G~~~P~~~~~lv~~l~~~~~~~i~~H~Hnt~G~a~An~laA~~aGa~ 762 (1150)
T 3hbl_A 709 LAIK-DMA--GLLKPKAAYELIGELKSAVDLPIHLHTHDTSGNGLLTYKQAIDAGVD 762 (1150)
T ss_dssp EEEE-ETT--CCCCHHHHHHHHHHHHHHCCSCEEEEECBTTSCHHHHHHHHHHTTCS
T ss_pred eeEc-Ccc--CCCCHHHHHHHHHHHHHhcCCeEEEEeCCCCcHHHHHHHHHHHhCCC
Confidence 6432 222 23467777777776654 4899999997765543332 223455654
No 263
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=47.18 E-value=1.3e+02 Score=25.49 Aligned_cols=56 Identities=5% Similarity=-0.043 Sum_probs=35.0
Q ss_pred hhhHHHHHHHHHHhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHc-C-CcEEEEcCCchh
Q 020079 182 EVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL-G-ALAMVHAENGDA 240 (331)
Q Consensus 182 ~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~-g-~~v~~H~e~~~~ 240 (331)
.+...++.+.+.+.|++.+.+. +..+. .+++...++++..++. . +++.+|+.+...
T Consensus 154 ~~~~~~~~~~~~~~G~d~i~l~-Dt~G~--~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~G 211 (295)
T 1ydn_A 154 PQAVASVTEQLFSLGCHEVSLG-DTIGR--GTPDTVAAMLDAVLAIAPAHSLAGHYHDTGG 211 (295)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEE-ETTSC--CCHHHHHHHHHHHHTTSCGGGEEEEEBCTTS
T ss_pred HHHHHHHHHHHHhcCCCEEEec-CCCCC--cCHHHHHHHHHHHHHhCCCCeEEEEECCCcc
Confidence 3334444444437899987654 34443 5778888877777654 3 678899865544
No 264
>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}
Probab=45.22 E-value=1.4e+02 Score=25.26 Aligned_cols=56 Identities=13% Similarity=-0.054 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHcCCcEEE-EcCC-c-h------hhHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHHHhcCCC
Q 020079 215 ELLIEGFKRCKSLGALAMV-HAEN-G-D------AVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTP 285 (331)
Q Consensus 215 ~~l~~~~~~A~~~g~~v~~-H~e~-~-~------~~~~~~~~~~~~G~~~~~~~~~~~~~~~e~~~i~~~~~l~~~~g~~ 285 (331)
+.+++.++.|++.|.+..+ |... . . ..+...+.+ ...+.+..+.+++.|++
T Consensus 114 ~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~--------------------~~~l~~l~~~a~~~Gv~ 173 (316)
T 3qxb_A 114 QHLKRAIDMTAAMEVPATGMPFGSYSAADALNPARREEIYAIA--------------------RDMWIELAAYAKRQGLS 173 (316)
T ss_dssp HHHHHHHHHHHHTTCCEEEECCBBCCHHHHTCHHHHHHHHHHH--------------------HHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHcCCCEEEecCCCcCccccCCcccHHHHHHHH--------------------HHHHHHHHHHHHhcCCe
Confidence 4578899999999998654 4432 1 0 011111111 34566777888888988
Q ss_pred -EEEEe
Q 020079 286 -LYVVH 290 (331)
Q Consensus 286 -~~i~H 290 (331)
+.+..
T Consensus 174 ~l~lE~ 179 (316)
T 3qxb_A 174 MLYVEP 179 (316)
T ss_dssp EEEECC
T ss_pred EEEEEe
Confidence 76654
No 265
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=45.17 E-value=1.9e+02 Score=26.64 Aligned_cols=178 Identities=16% Similarity=0.154 Sum_probs=94.3
Q ss_pred ChhhHHHHHHHHHhCCceEEecCcCC--------CCCcHHHHHHHHHHHhccceeecccc----ccccCCChhh-HHHHH
Q 020079 123 TIDDFFSGQAAALAGGTTMHIDFVIP--------INGSLTAGFEAYEKKAKNSCMDYGFH----MAITKWDEVV-SDEME 189 (331)
Q Consensus 123 ~~~~~~~~~~~~l~~GvTtv~d~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~-~~~~~ 189 (331)
+.++....++.+.+.|+..+--.+.. ......+.++..++..+...+..... .+....+++. ...++
T Consensus 28 ~~~dkl~Ia~~L~~~Gv~~IE~g~~atF~~~~r~~~~d~~e~l~~i~~~~~~~~l~~l~R~~N~~G~~~~~ddv~~~~v~ 107 (464)
T 2nx9_A 28 RIDDMLPIAQQLDQIGYWSLECWGGATFDSCIRFLGEDPWQRLRLLKQAMPNTPLQMLLRGQNLLGYRHYADDVVDTFVE 107 (464)
T ss_dssp CGGGTGGGHHHHHTSCCSEEEEEETTHHHHHHHTTCCCHHHHHHHHHHHCSSSCEEEEECGGGTTSSSCCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCcCccccchhhccCCCHHHHHHHHHHhCCCCeEEEEeccccccCcccccchhhHHHHH
Confidence 34444444566677898887532211 02245566666655433322221111 1111223333 23444
Q ss_pred HHHHHhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEE--EEcCC-----chhhHHHHHHHHHcCCCCcc---cc
Q 020079 190 VMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAM--VHAEN-----GDAVFEGQKRMIELGITGPE---GH 259 (331)
Q Consensus 190 ~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~--~H~e~-----~~~~~~~~~~~~~~G~~~~~---~~ 259 (331)
... +.|++.+.++... .+.+.+...++.|++.|..+. +|.+. .+......+.+.+.|..... ..
T Consensus 108 ~a~-~~Gvd~i~if~~~-----sd~~ni~~~i~~ak~~G~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad~I~l~DT~ 181 (464)
T 2nx9_A 108 RAV-KNGMDVFRVFDAM-----NDVRNMQQALQAVKKMGAHAQGTLCYTTSPVHNLQTWVDVAQQLAELGVDSIALKDMA 181 (464)
T ss_dssp HHH-HTTCCEEEECCTT-----CCTHHHHHHHHHHHHTTCEEEEEEECCCCTTCCHHHHHHHHHHHHHTTCSEEEEEETT
T ss_pred HHH-hCCcCEEEEEEec-----CHHHHHHHHHHHHHHCCCEEEEEEEeeeCCCCCHHHHHHHHHHHHHCCCCEEEEcCCC
Confidence 454 7899988876432 233678899999999999874 45432 23333334557777764221 11
Q ss_pred cccCChHHHHHHHHHHHHHH-HhcCCCEEE-EeCCCHHHHHHHHHHHHcCCCEE
Q 020079 260 ALSRPPLLEGEATTRAIRLA-EFVNTPLYV-VHVMSMDAMEEIAKARKAGPNFL 311 (331)
Q Consensus 260 ~~~~~~~~e~~~i~~~~~l~-~~~g~~~~i-~H~~~~~~~~~i~~~~~~Gi~v~ 311 (331)
+...| ..+.+.+... +..+.++++ +|.+.+-+++-.-.+.++|+.+.
T Consensus 182 G~~~P-----~~v~~lv~~l~~~~~~~i~~H~Hnd~GlAvAN~laAv~AGa~~V 230 (464)
T 2nx9_A 182 GILTP-----YAAEELVSTLKKQVDVELHLHCHSTAGLADMTLLKAIEAGVDRV 230 (464)
T ss_dssp SCCCH-----HHHHHHHHHHHHHCCSCEEEEECCTTSCHHHHHHHHHHTTCSEE
T ss_pred CCcCH-----HHHHHHHHHHHHhcCCeEEEEECCCCChHHHHHHHHHHhCCCEE
Confidence 11223 2233333332 334666554 47777777777777888998854
No 266
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=44.80 E-value=79 Score=25.85 Aligned_cols=111 Identities=14% Similarity=0.152 Sum_probs=66.4
Q ss_pred CChhhHHHHHHHHHhCCceEEecCcCCCCCcHHHHHHHHHHHhccceeeccccccccCCChhhHHHHHHHHHHhCCCeEE
Q 020079 122 ETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFK 201 (331)
Q Consensus 122 ~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik 201 (331)
.++++.....+.++.+|++.+.-. .......+.++..++..+...+.. + +..+ .++++... +.|.+.+
T Consensus 22 ~~~~~a~~~a~al~~gGi~~iEvt--~~t~~a~~~I~~l~~~~p~~~IGA----G-TVlt---~~~a~~ai-~AGA~fi- 89 (217)
T 3lab_A 22 DDLVHAIPMAKALVAGGVHLLEVT--LRTEAGLAAISAIKKAVPEAIVGA----G-TVCT---ADDFQKAI-DAGAQFI- 89 (217)
T ss_dssp SCGGGHHHHHHHHHHTTCCEEEEE--TTSTTHHHHHHHHHHHCTTSEEEE----E-CCCS---HHHHHHHH-HHTCSEE-
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEe--CCCccHHHHHHHHHHHCCCCeEee----c-cccC---HHHHHHHH-HcCCCEE-
Confidence 567777777889999999987621 112245666666665544322221 1 1112 34556666 7888776
Q ss_pred EEEecCCCCcCCHHHHHHHHHHHHHcCC------cEEEEcCCchhhHHHHHHHHHcCCCCccc
Q 020079 202 FFMAYKGSFMINDELLIEGFKRCKSLGA------LAMVHAENGDAVFEGQKRMIELGITGPEG 258 (331)
Q Consensus 202 ~~~~~~~~~~~~~~~l~~~~~~A~~~g~------~v~~H~e~~~~~~~~~~~~~~~G~~~~~~ 258 (331)
++|. .+++ +++.|+++|+ ++.--+.++.++... .+.|...-+.
T Consensus 90 --vsP~----~~~e----vi~~~~~~~v~~~~~~~~~PG~~TptE~~~A----~~~Gad~vK~ 138 (217)
T 3lab_A 90 --VSPG----LTPE----LIEKAKQVKLDGQWQGVFLPGVATASEVMIA----AQAGITQLKC 138 (217)
T ss_dssp --EESS----CCHH----HHHHHHHHHHHCSCCCEEEEEECSHHHHHHH----HHTTCCEEEE
T ss_pred --EeCC----CcHH----HHHHHHHcCCCccCCCeEeCCCCCHHHHHHH----HHcCCCEEEE
Confidence 3433 4554 4556677888 888777777776544 4566654433
No 267
>4djd_C C/Fe-SP, corrinoid/iron-sulfur protein large subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_C* 4djf_C*
Probab=44.68 E-value=66 Score=29.47 Aligned_cols=95 Identities=16% Similarity=0.065 Sum_probs=55.5
Q ss_pred CHHHHHHHHHHHHH-cCCcEEEEcCCchhhHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHHHhcCCCEEEEeC
Q 020079 213 NDELLIEGFKRCKS-LGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHV 291 (331)
Q Consensus 213 ~~~~l~~~~~~A~~-~g~~v~~H~e~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~e~~~i~~~~~l~~~~g~~~~i~H~ 291 (331)
+++.+.++++..++ .++|+.+-..+++..+...+...+. .+-.+.. . .+..++...++.++++++.+.|.
T Consensus 139 dpe~~~~vVk~V~e~~dvPL~IDS~dpevleaALea~a~~---~plI~sa-t-----~dn~e~m~~lAa~y~~pVi~~~~ 209 (446)
T 4djd_C 139 DPAAFKAAVASVAAATQLNLVLMADDPDVLKEALAGVADR---KPLLYAA-T-----GANYEAMTALAKENNCPLAVYGN 209 (446)
T ss_dssp STHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHGGGGGG---CCEEEEE-C-----TTTHHHHHHHHHHTTCCEEEECS
T ss_pred CHHHHHHHHHHHHHhCCCCEEEecCCHHHHHHHHHhhcCc---CCeeEec-c-----hhhHHHHHHHHHHcCCcEEEEec
Confidence 45677777766644 4778877776665555443222110 0000110 0 12345567788888999888886
Q ss_pred CCHHHHHHHHHHHHcCC-CEEEecCC
Q 020079 292 MSMDAMEEIAKARKAGP-NFLNTTIP 316 (331)
Q Consensus 292 ~~~~~~~~i~~~~~~Gi-~v~~~~~p 316 (331)
.-....+.+.++.+.|+ +|..|...
T Consensus 210 dl~~lkelv~~a~~~GI~~IvLDPG~ 235 (446)
T 4djd_C 210 GLEELAELVDKIVALGHKQLVLDPGA 235 (446)
T ss_dssp SHHHHHHHHHHHHHTTCCCEEEECCC
T ss_pred cHHHHHHHHHHHHHCCCCcEEECCCc
Confidence 33344457788888888 57766444
No 268
>2d69_A Ribulose bisphosphate carboxylase; alpha/beta barrel, structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.90A {Pyrococcus horikoshii} SCOP: c.1.14.1 d.58.9.1 PDB: 2cxe_A 2cwx_A
Probab=44.66 E-value=1.8e+02 Score=26.41 Aligned_cols=109 Identities=10% Similarity=0.040 Sum_probs=60.1
Q ss_pred CChhhHHHHHHHHHhCCceEEecCcCCCCC---cHHHHHHHHHHH----hccceeeccccccccCCChhhHHHHHHHHHH
Q 020079 122 ETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTAGFEAYEKK----AKNSCMDYGFHMAITKWDEVVSDEMEVMVKE 194 (331)
Q Consensus 122 ~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (331)
.+++.+.......+.+|+--+-|-....+. ...+.+....+. .....-.-.+...++...++..+..+... +
T Consensus 165 Ls~~~~a~~~ye~~~GGlDfiKDDE~l~~qpf~p~~eRv~~v~eai~ra~~eTGe~k~y~~NiTa~~~em~~Ra~~a~-e 243 (430)
T 2d69_A 165 WSVEEYAEIAYELWSGGIDLLKDDENFTSFPFNRFEERVRKLYRVRDRVEAETGETKEYLINITGPVNIMEKRAEMVA-N 243 (430)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEECCTTCSCBTTBCHHHHHHHHHHHHHHHHHHHSSCCEEECBCCSSHHHHHHHHHHHH-H
T ss_pred CCHHHHHHHHHHHHhCCCcEeECCCCCCCCCCccHHHHHHHHHHHHHHHHHhhCCccEEEeecCCCHHHHHHHHHHHH-H
Confidence 577888888888899999888766544332 334433322222 11111111122233333344444443333 5
Q ss_pred hCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEcC
Q 020079 195 KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAE 236 (331)
Q Consensus 195 ~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e 236 (331)
.|...+- +++ ....-..+..+.+.+++.+++++.|-.
T Consensus 244 ~G~~~~m--vd~---~~~G~~a~~~l~~~~r~~~l~lh~HrA 280 (430)
T 2d69_A 244 EGGQYVM--IDI---VVAGWSALQYMREVTEDLGLAIHAHRA 280 (430)
T ss_dssp HTCCEEE--EEH---HHHCHHHHHHHHHHHHHHTCEEEEECT
T ss_pred cCCCeEE--EEe---eccChHHHHHHHHHhhccCcEEEeccC
Confidence 7776542 222 112346677888888889999999943
No 269
>3rhg_A Putative phophotriesterase; hydrolase, amidohydrolase, zinc binding site, enzyme functio initiative, EFI; HET: SO4; 1.53A {Proteus mirabilis}
Probab=44.47 E-value=1.7e+02 Score=25.90 Aligned_cols=12 Identities=42% Similarity=0.537 Sum_probs=10.3
Q ss_pred ccccccccccCC
Q 020079 106 GGIDPHTHLAME 117 (331)
Q Consensus 106 G~ID~H~H~~~~ 117 (331)
|++.+|=|+...
T Consensus 18 G~tl~HEHl~~~ 29 (365)
T 3rhg_A 18 GLTLPHEHLFND 29 (365)
T ss_dssp CEEEEEECSSCC
T ss_pred cCceeccceeec
Confidence 899999999765
No 270
>3kdn_A Rubisco, ribulose bisphosphate carboxylase; ribulose-1,5-bisphosphate carboxylase/oxygenase, Ca dioxide fixation, lyase, magnesium; HET: KCX CAP; 2.09A {Thermococcus kodakaraensis} PDB: 3a13_A* 3kdo_A* 3a12_A* 1geh_A*
Probab=43.94 E-value=1.8e+02 Score=26.66 Aligned_cols=109 Identities=13% Similarity=0.023 Sum_probs=60.4
Q ss_pred CChhhHHHHHHHHHhCCceEEecCcCCCCC---cHHHHHHHHHH----HhccceeeccccccccCCChhhHHHHHHHHHH
Q 020079 122 ETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTAGFEAYEK----KAKNSCMDYGFHMAITKWDEVVSDEMEVMVKE 194 (331)
Q Consensus 122 ~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (331)
++++.+.......+.+|+--+-|-....+. ...+.+....+ +.....-.-.+...++...++..+..+... +
T Consensus 168 Ls~~~~a~~~ye~~~GGlDfiKDDE~l~~qpf~p~~eRv~~v~eai~rA~~eTGe~k~y~~NiTa~~~eM~~Ra~~a~-e 246 (444)
T 3kdn_A 168 YSPEEFEKLAYDLLSNGADYMKDDENLTSPWYNRFEERAEIMAKIIDKVENETGEKKTWFANITADLLEMEQRLEVLA-D 246 (444)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEECCTTCCSCTTSCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCSSHHHHHHHHHHHH-H
T ss_pred CCHHHHHHHHHHHHhcCCceeecCcCCCCCCCCCHHHHHHHHHHHHHHHHHhhCCcceEEeecCCCHHHHHHHHHHHH-H
Confidence 577888888888999999888766544332 34443333222 221111111122233333344444444344 5
Q ss_pred hCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEcC
Q 020079 195 KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAE 236 (331)
Q Consensus 195 ~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e 236 (331)
.|.+.+ .++. .......++.+.+.+.+.+++++.|-.
T Consensus 247 ~G~~~~--mvd~---~~~G~~a~~~l~~~~~~~~l~lh~HrA 283 (444)
T 3kdn_A 247 LGLKHA--MVDV---VITGWGALRYIRDLAADYGLAIHGHRA 283 (444)
T ss_dssp HTCCEE--EEEH---HHHCHHHHHHHHHHHHHHTCEEEEECT
T ss_pred cCCCEE--EEcc---ccccHHHHHHHHHhccccCeEEEEccC
Confidence 677654 3332 122456677777778889999999943
No 271
>2anu_A Hypothetical protein TM0559; predicted metal-dependent phosphoesterase (PHP famil structural genomics, joint center for structural genomics; 2.40A {Thermotoga maritima} SCOP: c.6.3.1
Probab=43.70 E-value=16 Score=30.63 Aligned_cols=33 Identities=18% Similarity=0.099 Sum_probs=24.6
Q ss_pred cccccccccCCCCCCCChhhHHHHHHHHHhCCceEEe
Q 020079 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHI 143 (331)
Q Consensus 107 ~ID~H~H~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~ 143 (331)
++|.|+|...+ -|..+++++ .+.+.+.|++.+.
T Consensus 21 ~~DlH~Ht~~S-Dg~~t~ee~---v~~A~~~Gl~~i~ 53 (255)
T 2anu_A 21 LCDFHVHTNMS-DGHLPLGEV---VDLFGKHGVDVVS 53 (255)
T ss_dssp EEEEEECCTTT-TCSSCHHHH---HHHHHHTTCSEEE
T ss_pred EEEEeecCCCc-CCCCCHHHH---HHHHHHCCCCEEE
Confidence 69999999765 455555654 6778889998765
No 272
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=43.13 E-value=1.5e+02 Score=25.91 Aligned_cols=68 Identities=16% Similarity=0.151 Sum_probs=36.9
Q ss_pred hHHHHHHHHHHhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHHHcCCC
Q 020079 184 VSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGIT 254 (331)
Q Consensus 184 ~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~~~G~~ 254 (331)
..+.++.+. +.|...+-+..++..+...+.+.+.++++.+++.++.+.+.... ...+..+.+.+.|+.
T Consensus 104 i~~~~~~~~-~~g~~~i~~~gg~~~p~~~~~~~l~~ll~~ik~~g~~i~~t~G~--l~~e~l~~L~~aGvd 171 (369)
T 1r30_A 104 VLESARKAK-AAGSTRFCMGAAWKNPHERDMPYLEQMVQGVKAMGLEACMTLGT--LSESQAQRLANAGLD 171 (369)
T ss_dssp HHHHHHHHH-HTTCSEEEEEECCSSCCTTTHHHHHHHHHHHHHTTSEEEEECSS--CCHHHHHHHHHHCCC
T ss_pred HHHHHHHHH-HcCCcEEEEEeCCCCCCcCCHHHHHHHHHHHHHcCCeEEEecCC--CCHHHHHHHHHCCCC
Confidence 334444333 45766654322221133356778888888888888877643322 223344556666654
No 273
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=41.98 E-value=1.2e+02 Score=25.86 Aligned_cols=15 Identities=0% Similarity=-0.137 Sum_probs=8.9
Q ss_pred HHHHHHHHcCCCEEE
Q 020079 298 EEIAKARKAGPNFLN 312 (331)
Q Consensus 298 ~~i~~~~~~Gi~v~~ 312 (331)
+.++.+++.|+.|=.
T Consensus 119 ~vv~~ah~~gvsVEa 133 (286)
T 1gvf_A 119 SVVDFCHSQDCSVEA 133 (286)
T ss_dssp HHHHHHHHTTCEEEE
T ss_pred HHHHHHHHcCCEEEE
Confidence 455666667765543
No 274
>3elf_A Fructose-bisphosphate aldolase; zinc enzyme, dihydroxyacetone, glyceraldehyd phosphate, aldol condensation, glycolysis, lyase; HET: 2FP; 1.31A {Mycobacterium tuberculosis} PDB: 3ekz_A* 3ekl_A* 4a22_A* 4a21_A*
Probab=41.80 E-value=1.2e+02 Score=26.66 Aligned_cols=68 Identities=15% Similarity=0.258 Sum_probs=39.1
Q ss_pred HHHHHHHHHHhC-----CCeEEEEEe-cCC-----CCcCCHHHHHHHHHHHH-Hc-------CCcEEEEcCCchhhHHHH
Q 020079 185 SDEMEVMVKEKG-----INSFKFFMA-YKG-----SFMINDELLIEGFKRCK-SL-------GALAMVHAENGDAVFEGQ 245 (331)
Q Consensus 185 ~~~~~~~~~~~g-----~~~ik~~~~-~~~-----~~~~~~~~l~~~~~~A~-~~-------g~~v~~H~e~~~~~~~~~ 245 (331)
.++..+++++.| ++.+-+.++ -|+ .+..+.+.|+++-+... +. ++|+..|-.+.-..++ .
T Consensus 184 Peea~~Fv~~tg~~~~gvD~LAvaiGt~HG~Yk~g~p~L~~~~L~~I~~~v~~~~~~~~~~~~vpLVlHGgSG~p~e~-i 262 (349)
T 3elf_A 184 PEDFEKTIEALGAGEHGKYLLAATFGNVHGVYKPGNVKLRPDILAQGQQVAAAKLGLPADAKPFDFVFHGGSGSLKSE-I 262 (349)
T ss_dssp HHHHHHHHHHHTTSTTSCEEEEECSSCBSSCCCTTSSCCCTHHHHHHHHHHHHHHTCCTTCCCCCEEECCCTTCCHHH-H
T ss_pred HHHHHHHHHHhCCCCCCceEEEEecCCcccCCCCCCCccCHHHHHHHHHHHHhhcCCccccCCCcEEEeCCCCCCHHH-H
Confidence 455666665556 676655333 233 23467888888887763 33 5899999644322222 2
Q ss_pred HHHHHcCC
Q 020079 246 KRMIELGI 253 (331)
Q Consensus 246 ~~~~~~G~ 253 (331)
++..+.|+
T Consensus 263 ~~ai~~GV 270 (349)
T 3elf_A 263 EEALRYGV 270 (349)
T ss_dssp HHHHHTTE
T ss_pred HHHHHcCC
Confidence 33445554
No 275
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=41.52 E-value=1.6e+02 Score=24.74 Aligned_cols=66 Identities=12% Similarity=0.064 Sum_probs=42.6
Q ss_pred HHHHHHHHHhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEE-cCC-chhhHHHHHHHHHcCCCC
Q 020079 186 DEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVH-AEN-GDAVFEGQKRMIELGITG 255 (331)
Q Consensus 186 ~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H-~e~-~~~~~~~~~~~~~~G~~~ 255 (331)
++++.+. +.|++++.+.. -......+.+.++++++.|+ ++++..| +-+ ........+.+.+.|+..
T Consensus 77 ~Di~~~~-~~GadGvV~G~-Lt~dg~iD~~~~~~Li~~a~--~~~vTFHRAfD~~~d~~~ale~L~~lG~~r 144 (256)
T 1twd_A 77 EDVRTVR-ELGFPGLVTGV-LDVDGNVDMPRMEKIMAAAG--PLAVTFHRAFDMCANPLYTLNNLAELGIAR 144 (256)
T ss_dssp HHHHHHH-HTTCSEEEECC-BCTTSSBCHHHHHHHHHHHT--TSEEEECGGGGGCSCHHHHHHHHHHHTCCE
T ss_pred HHHHHHH-HcCCCEEEEee-ECCCCCcCHHHHHHHHHHhC--CCcEEEECchhccCCHHHHHHHHHHcCCCE
Confidence 3343333 68999885432 12233578999999998875 8999999 432 233445566777878753
No 276
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=40.68 E-value=1.5e+02 Score=25.50 Aligned_cols=95 Identities=16% Similarity=0.059 Sum_probs=48.7
Q ss_pred HhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHc---CCcEEEEcCC-chhhHHHHHHHHHcCCCCccccc--ccCChHH
Q 020079 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAEN-GDAVFEGQKRMIELGITGPEGHA--LSRPPLL 267 (331)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~---g~~v~~H~e~-~~~~~~~~~~~~~~G~~~~~~~~--~~~~~~~ 267 (331)
+.|++++-+..+.......+.++-+++++.+.+. .+|+.+++.+ ..+.-+..+...+.|..+--... ...|.
T Consensus 44 ~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~st~~ai~la~~A~~~Gadavlv~~P~y~~~s-- 121 (314)
T 3d0c_A 44 QNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVAGIGYSVDTAIELGKSAIDSGADCVMIHQPVHPYIT-- 121 (314)
T ss_dssp HTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECSSHHHHHHHHHHHHHTTCSEEEECCCCCSCCC--
T ss_pred HcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCeEEecCCcCHHHHHHHHHHHHHcCCCEEEECCCCCCCCC--
Confidence 5788776332222223456777766666655442 4678888643 23333333456677765321100 01221
Q ss_pred HHHHHHHHHHHHHhcCCCEEEEe
Q 020079 268 EGEATTRAIRLAEFVNTPLYVVH 290 (331)
Q Consensus 268 e~~~i~~~~~l~~~~g~~~~i~H 290 (331)
+...++-+-.++...+.++.+-+
T Consensus 122 ~~~l~~~f~~va~a~~lPiilYn 144 (314)
T 3d0c_A 122 DAGAVEYYRNIIEALDAPSIIYF 144 (314)
T ss_dssp HHHHHHHHHHHHHHSSSCEEEEE
T ss_pred HHHHHHHHHHHHHhCCCCEEEEe
Confidence 12233444456666778887776
No 277
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=40.47 E-value=2e+02 Score=25.60 Aligned_cols=68 Identities=10% Similarity=-0.014 Sum_probs=37.3
Q ss_pred hhHHHHHHHHHHhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHc---CCcEEEEcCCchhhHHHH-HHHHHcCCC
Q 020079 183 VVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAENGDAVFEGQ-KRMIELGIT 254 (331)
Q Consensus 183 ~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~---g~~v~~H~e~~~~~~~~~-~~~~~~G~~ 254 (331)
+...++.+.+.+. ++.|.+- +.. -...+..+.++++..++. ++++.+|+.++....-.. ....+.|..
T Consensus 145 ~~~~~~~~~~~~~-a~~i~l~-DT~--G~~~P~~~~~lv~~l~~~~~~~~~i~~H~Hnd~GlAvAN~laAv~aGa~ 216 (382)
T 2ztj_A 145 QDLLAVYEAVAPY-VDRVGLA-DTV--GVATPRQVYALVREVRRVVGPRVDIEFHGHNDTGCAIANAYEAIEAGAT 216 (382)
T ss_dssp HHHHHHHHHHGGG-CSEEEEE-ETT--SCCCHHHHHHHHHHHHHHHTTTSEEEEEEBCTTSCHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHh-cCEEEec-CCC--CCCCHHHHHHHHHHHHHhcCCCCeEEEEeCCCccHHHHHHHHHHHhCCC
Confidence 3333333333256 6665432 222 234677877777776654 688999997765543332 223455654
No 278
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=40.10 E-value=2e+02 Score=25.49 Aligned_cols=165 Identities=15% Similarity=0.075 Sum_probs=87.4
Q ss_pred hhHHHHHHHHHhCCceEEecCcCCCCCcHHHHHHHHHHHhcc-ceeeccccccccCCChhhHHHHHHHHHHhCCCeEEEE
Q 020079 125 DDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKN-SCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFF 203 (331)
Q Consensus 125 ~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~ 203 (331)
+......+.+.+.|.--++-.. .+....+.+...++...- ...|+.| +. +.+...+ +.|++.+.+
T Consensus 46 ~atv~Qi~~l~~aG~diVRvav--p~~~~a~al~~I~~~~~vPlvaDiHf-------~~---~lal~a~-e~G~dklRI- 111 (366)
T 3noy_A 46 EATLNQIKRLYEAGCEIVRVAV--PHKEDVEALEEIVKKSPMPVIADIHF-------AP---SYAFLSM-EKGVHGIRI- 111 (366)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEC--CSHHHHHHHHHHHHHCSSCEEEECCS-------CH---HHHHHHH-HTTCSEEEE-
T ss_pred HHHHHHHHHHHHcCCCEEEeCC--CChHHHHHHHHHHhcCCCCEEEeCCC-------CH---HHHHHHH-HhCCCeEEE-
Confidence 3444445666788887766221 111223334444333211 1122222 21 2223344 678887654
Q ss_pred EecCCCCcCCHHHHHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHHHhcC
Q 020079 204 MAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVN 283 (331)
Q Consensus 204 ~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~e~~~i~~~~~l~~~~g 283 (331)
+|... -+++.++++++.|+++|+|+-+-++..+.......+| |-.. +..-.+...+.++++.+.|
T Consensus 112 -NPGNi--g~~~~~~~vv~~ak~~~~piRIGvN~GSL~~~ll~~y---g~~~---------~eamVeSAl~~~~~~e~~g 176 (366)
T 3noy_A 112 -NPGNI--GKEEIVREIVEEAKRRGVAVRIGVNSGSLEKDLLEKY---GYPS---------AEALAESALRWSEKFEKWG 176 (366)
T ss_dssp -CHHHH--SCHHHHHHHHHHHHHHTCEEEEEEEGGGCCHHHHHHH---SSCC---------HHHHHHHHHHHHHHHHHTT
T ss_pred -CCccc--CchhHHHHHHHHHHHcCCCEEEecCCcCCCHHHHHhc---CCCC---------HHHHHHHHHHHHHHHHhCC
Confidence 44321 2578899999999999999988765444443333332 2211 1111234455667888888
Q ss_pred C-CEEEEeCCC--HHHHHHHHHHHHcCCCEEEecCCccccchhh
Q 020079 284 T-PLYVVHVMS--MDAMEEIAKARKAGPNFLNTTIPLCDSCSNI 324 (331)
Q Consensus 284 ~-~~~i~H~~~--~~~~~~i~~~~~~Gi~v~~~~~p~~~~~~~~ 324 (331)
. ++.++.-++ ...++..+++.++ .-||-|+..++.
T Consensus 177 f~~iviS~K~S~v~~~i~ayr~la~~------~dyPLHlGvTEA 214 (366)
T 3noy_A 177 FTNYKVSIKGSDVLQNVRANLIFAER------TDVPLHIGITEA 214 (366)
T ss_dssp CCCEEEEEECSSHHHHHHHHHHHHHH------CCCCEEECCSSC
T ss_pred CCeEEEeeecCChHHHHHHHHHHHhc------cCCCEEEccCCC
Confidence 5 566665544 2455666666655 135666655543
No 279
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=40.05 E-value=1.7e+02 Score=24.70 Aligned_cols=17 Identities=6% Similarity=-0.171 Sum_probs=9.1
Q ss_pred HHHHHHHHHhCCceEEe
Q 020079 127 FFSGQAAALAGGTTMHI 143 (331)
Q Consensus 127 ~~~~~~~~l~~GvTtv~ 143 (331)
+....+.+.+.|+..+-
T Consensus 31 ~~~~l~~~a~~G~~~VE 47 (303)
T 3l23_A 31 VAANLRKVKDMGYSKLE 47 (303)
T ss_dssp HHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHcCCCEEE
Confidence 34445555566666553
No 280
>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida}
Probab=39.99 E-value=1.2e+02 Score=25.71 Aligned_cols=38 Identities=16% Similarity=0.070 Sum_probs=20.5
Q ss_pred HHHHHHHhcCC---CEEEEeCCCHHHHHHHHHHHHcCCCEEEe
Q 020079 274 RAIRLAEFVNT---PLYVVHVMSMDAMEEIAKARKAGPNFLNT 313 (331)
Q Consensus 274 ~~~~l~~~~g~---~~~i~H~~~~~~~~~i~~~~~~Gi~v~~~ 313 (331)
+.++++++.+. +. +.|+-+++ .+.++++.+.|+.+++.
T Consensus 140 ~~l~il~~~~~~~~~~-V~H~fsG~-~e~a~~~l~~G~yis~~ 180 (287)
T 3rcm_A 140 RLLAILKDYRDHLTGA-VVHCFTGE-REALFAYLDLDLHIGIT 180 (287)
T ss_dssp HHHHHHHTTGGGCSCE-EECSCCCC-HHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHcCCCCCeE-EEEeCCCC-HHHHHHHHHCCcEEEEC
Confidence 34445554432 33 44764433 35666667778777655
No 281
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=39.81 E-value=1.7e+02 Score=24.73 Aligned_cols=58 Identities=16% Similarity=-0.055 Sum_probs=33.4
Q ss_pred HHHHHHHHhCCCeEEEEEecCCC-----CcCCHHHHHHHHHHHHHcCCcEEEEcCCchhhHHH
Q 020079 187 EMEVMVKEKGINSFKFFMAYKGS-----FMINDELLIEGFKRCKSLGALAMVHAENGDAVFEG 244 (331)
Q Consensus 187 ~~~~~~~~~g~~~ik~~~~~~~~-----~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~ 244 (331)
++.+.+++.|.+.+|.+.-.... .....+.++.+.+.+++.|+++..=..+...++..
T Consensus 56 ~~a~~~k~~ga~~~k~~~~kprts~~~f~g~g~~gl~~l~~~~~~~Gl~~~te~~d~~~~~~l 118 (276)
T 1vs1_A 56 EAALAVKEAGAHMLRGGAFKPRTSPYSFQGLGLEGLKLLRRAGDEAGLPVVTEVLDPRHVETV 118 (276)
T ss_dssp HHHHHHHHHTCSEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHHTCCEEEECCCGGGHHHH
T ss_pred HHHHHHHHhCCCEEEeEEEeCCCChhhhcCCCHHHHHHHHHHHHHcCCcEEEecCCHHHHHHH
Confidence 33333335677766654211100 01137788888888888899888766555554443
No 282
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=39.18 E-value=62 Score=28.09 Aligned_cols=121 Identities=11% Similarity=0.027 Sum_probs=62.7
Q ss_pred hhHHHHHHHHHHhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHHHcCCCCcc-----
Q 020079 183 VVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPE----- 257 (331)
Q Consensus 183 ~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~~~G~~~~~----- 257 (331)
+..+.++.+. +.|...+.+. ....+..+.+.+.++++.+++.++.+.+.... ...+..+.+.+.|+..-.
T Consensus 88 ei~~~i~~~~-~~g~~~i~~~--gGe~p~~~~~~~~~li~~i~~~~~~i~~s~g~--l~~e~l~~L~~ag~~~v~i~let 162 (348)
T 3iix_A 88 EIVERARLAV-QFGAKTIVLQ--SGEDPYXMPDVISDIVKEIKKMGVAVTLSLGE--WPREYYEKWKEAGADRYLLRHET 162 (348)
T ss_dssp HHHHHHHHHH-HTTCSEEEEE--ESCCGGGTTHHHHHHHHHHHTTSCEEEEECCC--CCHHHHHHHHHHTCCEEECCCBC
T ss_pred HHHHHHHHHH-HCCCCEEEEE--eCCCCCccHHHHHHHHHHHHhcCceEEEecCC--CCHHHHHHHHHhCCCEEeeeeee
Confidence 3444554444 5677766442 22224455578888888888887666655322 223334556666653211
Q ss_pred ----cccccCChHHHHHHHHHHHHHHHhcCCCEEEE----e-CCCH-HHHHHHHHHHHcCCC
Q 020079 258 ----GHALSRPPLLEGEATTRAIRLAEFVNTPLYVV----H-VMSM-DAMEEIAKARKAGPN 309 (331)
Q Consensus 258 ----~~~~~~~~~~e~~~i~~~~~l~~~~g~~~~i~----H-~~~~-~~~~~i~~~~~~Gi~ 309 (331)
.+...++.. ..+...+.++.+.+.|..+... + .-+. +-.+.++.+++.|+.
T Consensus 163 ~~~~~~~~i~~~~-~~~~~~~~i~~~~~~Gi~v~~~~i~G~p~et~e~~~~~~~~l~~l~~~ 223 (348)
T 3iix_A 163 ANPVLHRKLRPDT-SFENRLNCLLTLKELGYETGAGSMVGLPGQTIDDLVDDLLFLKEHDFD 223 (348)
T ss_dssp SCHHHHHHHSTTS-CHHHHHHHHHHHHHTTCEEEECBEESCTTCCHHHHHHHHHHHHHHTCS
T ss_pred CCHHHHHHhCCCc-CHHHHHHHHHHHHHhCCeeccceEEeCCCCCHHHHHHHHHHHHhcCCC
Confidence 111111111 2344556667777778653322 1 1233 334467777777765
No 283
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=37.67 E-value=1.7e+02 Score=24.17 Aligned_cols=52 Identities=12% Similarity=0.063 Sum_probs=31.1
Q ss_pred ChhhHHHHHHHHHHhCCCeEEEEEecC---CCCcCC-------HHHHHHHHHHHHHcCCcEEE
Q 020079 181 DEVVSDEMEVMVKEKGINSFKFFMAYK---GSFMIN-------DELLIEGFKRCKSLGALAMV 233 (331)
Q Consensus 181 ~~~~~~~~~~~~~~~g~~~ik~~~~~~---~~~~~~-------~~~l~~~~~~A~~~g~~v~~ 233 (331)
.++..++++++.++.|...... ..+. .....+ .+.+++.++.|++.|.+...
T Consensus 45 ~~~~~~~~~~~l~~~gl~i~~~-~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~~lG~~~v~ 106 (294)
T 3vni_A 45 SDIQINELKACAHGNGITLTVG-HGPSAEQNLSSPDPDIRKNAKAFYTDLLKRLYKLDVHLIG 106 (294)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEE-ECCCGGGCTTCSCHHHHHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred CHHHHHHHHHHHHHcCCeEEEe-ecCCCCcCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCeee
Confidence 3456677777776777644321 1111 111112 24577899999999998773
No 284
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron}
Probab=37.63 E-value=2.9e+02 Score=26.63 Aligned_cols=130 Identities=15% Similarity=0.085 Sum_probs=71.7
Q ss_pred CChhhHHHHHHHHHhCCceEEe-cCcCC----------CC-CcHHHHHHHHHHHhccceeeccccccccCCChhhHHHHH
Q 020079 122 ETIDDFFSGQAAALAGGTTMHI-DFVIP----------IN-GSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEME 189 (331)
Q Consensus 122 ~~~~~~~~~~~~~l~~GvTtv~-d~~~~----------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (331)
.+.+....-...|.+.|+-.+. |-+-. .+ ....+.++..++.+-...+-..... . ++.+++.-
T Consensus 306 ~n~~~~k~yIDfAa~~G~~yvlvD~gW~~~~~~d~~~~~p~~di~~l~~Ya~~kgV~i~lw~~~~~----~-~~~~~~~~ 380 (641)
T 3a24_A 306 VNNPTYKAYIDFASANGIEYVILDEGWAVNLQADLMQVVKEIDLKELVDYAASKNVGIILWAGYHA----F-ERDMENVC 380 (641)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEECTTSBCTTSCCTTCBCTTCCHHHHHHHHHHTTCEEEEEEEHHH----H-HTSHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccccCCCCCccccCCcCCHHHHHHHHHhcCCEEEEEeeCcc----h-HHHHHHHH
Confidence 3556666666778899998876 43211 11 1456666666666543322221111 1 22234344
Q ss_pred HHHHHhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEE-cCCchhhHHHH-HHHHHcCCCCcc
Q 020079 190 VMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVH-AENGDAVFEGQ-KRMIELGITGPE 257 (331)
Q Consensus 190 ~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H-~e~~~~~~~~~-~~~~~~G~~~~~ 257 (331)
++.++.|+.++|+-.-+. ..+...+.+..+++.|.++++.|..| +..+......- ..+..+|+.+.+
T Consensus 381 ~~~~~~Gv~gvK~Df~~~-~~Q~~v~~y~~i~~~aA~~~l~V~fHg~~~P~Gl~RTyPN~~t~EgvrG~E 449 (641)
T 3a24_A 381 RHYAEMGVKGFKVDFMDR-DDQEMTAFNYRAAEMCAKYKLILDLHGTHKPAGLNRTYPNVLNFEGVNGLE 449 (641)
T ss_dssp HHHHHHTCCEEEEECCCC-CSHHHHHHHHHHHHHHHHTTCEEEECSCCCCTTHHHHCTTEEEECCSCCGG
T ss_pred HHHHHcCCCEEEECCCCC-CcHHHHHHHHHHHHHHHHcCCEEEcCCCcCCCcccccccchhhhhhhceee
Confidence 444478999999743222 11223455678999999999999999 44444332221 113445555544
No 285
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=37.44 E-value=1.9e+02 Score=24.60 Aligned_cols=120 Identities=15% Similarity=0.098 Sum_probs=66.8
Q ss_pred HHHHHHHHHHhCCCeEEEEEecCCC-----CcCC----HHHHHHHHHHHHHcCCcEEEE------cC-----CchhhHHH
Q 020079 185 SDEMEVMVKEKGINSFKFFMAYKGS-----FMIN----DELLIEGFKRCKSLGALAMVH------AE-----NGDAVFEG 244 (331)
Q Consensus 185 ~~~~~~~~~~~g~~~ik~~~~~~~~-----~~~~----~~~l~~~~~~A~~~g~~v~~H------~e-----~~~~~~~~ 244 (331)
.+.++... +.|.+.+.++...... ...+ .+.++++++.|+++|+.+..- ++ +++...+.
T Consensus 86 ~~~i~~a~-~aG~~~v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~ 164 (302)
T 2ftp_A 86 LKGFEAAL-ESGVKEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGYISCVLGCPYDGDVDPRQVAWV 164 (302)
T ss_dssp HHHHHHHH-HTTCCEEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHH
T ss_pred HHHHHHHH-hCCcCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHH
Confidence 35666666 6899988776543100 0012 245678899999999988532 22 22334444
Q ss_pred HHHHHHcCCCCcc---cccccCChHHHHHHHHHHHHHHH-hc-CCCEE-EEeCCCHHHHHHHHHHHHcCCCE
Q 020079 245 QKRMIELGITGPE---GHALSRPPLLEGEATTRAIRLAE-FV-NTPLY-VVHVMSMDAMEEIAKARKAGPNF 310 (331)
Q Consensus 245 ~~~~~~~G~~~~~---~~~~~~~~~~e~~~i~~~~~l~~-~~-g~~~~-i~H~~~~~~~~~i~~~~~~Gi~v 310 (331)
.+.+.+.|..... .++...| ..+.+.++... .. +.++. .+|...+-+.+-...+-+.|+..
T Consensus 165 ~~~~~~~G~d~i~l~DT~G~~~P-----~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla~An~laAv~aGa~~ 231 (302)
T 2ftp_A 165 ARELQQMGCYEVSLGDTIGVGTA-----GATRRLIEAVASEVPRERLAGHFHDTYGQALANIYASLLEGIAV 231 (302)
T ss_dssp HHHHHHTTCSEEEEEESSSCCCH-----HHHHHHHHHHTTTSCGGGEEEEEBCTTSCHHHHHHHHHHTTCCE
T ss_pred HHHHHHcCCCEEEEeCCCCCcCH-----HHHHHHHHHHHHhCCCCeEEEEeCCCccHHHHHHHHHHHhCCCE
Confidence 4556678875321 1222223 22333333333 33 34543 23557777778888888999864
No 286
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=37.24 E-value=1.6e+02 Score=23.67 Aligned_cols=48 Identities=8% Similarity=-0.010 Sum_probs=24.6
Q ss_pred hHHHHHHHHHHhCCCeEEEEEec-CCC--CcCCHHHHHHHHHHHHHcCCcEEEEc
Q 020079 184 VSDEMEVMVKEKGINSFKFFMAY-KGS--FMINDELLIEGFKRCKSLGALAMVHA 235 (331)
Q Consensus 184 ~~~~~~~~~~~~g~~~ik~~~~~-~~~--~~~~~~~l~~~~~~A~~~g~~v~~H~ 235 (331)
..+.++.+. +.|++.+++-... +.. .....+.++++. +..+.++.+|.
T Consensus 25 ~~~~i~~~~-~~G~d~i~l~~~dg~f~~~~~~~~~~i~~l~---~~~~~~~~v~l 75 (230)
T 1rpx_A 25 LGEQVKAIE-QAGCDWIHVDVMDGRFVPNITIGPLVVDSLR---PITDLPLDVHL 75 (230)
T ss_dssp HHHHHHHHH-HTTCCCEEEEEEBSSSSSCBCCCHHHHHHHG---GGCCSCEEEEE
T ss_pred HHHHHHHHH-HCCCCEEEEeeccCCcccccccCHHHHHHHH---hccCCcEEEEE
Confidence 344555554 7788888764321 111 122344444432 22367888885
No 287
>3o0f_A Putative metal-dependent phosphoesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: AMP; 1.94A {Bifidobacterium adolescentis} PDB: 3e0f_A*
Probab=37.14 E-value=68 Score=27.67 Aligned_cols=59 Identities=22% Similarity=0.125 Sum_probs=0.0
Q ss_pred cccccccccCCCCCCCChhhHHHHHHHHHhCCceEEe--cCcCCCCCcHHHHHHHHHHHhccceeec
Q 020079 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHI--DFVIPINGSLTAGFEAYEKKAKNSCMDY 171 (331)
Q Consensus 107 ~ID~H~H~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~--d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (331)
++|.|+|...+ -|..+++++ .+.+.+.|+..+. |..... ...+..+..++.+.......
T Consensus 14 ~~DLH~Hs~~S-DG~~~~~el---v~~A~~~Gl~~iaiTDH~~~~--g~~~~~~~~~~~gi~~i~Gv 74 (301)
T 3o0f_A 14 GWDIHCHTVFS-DGTETPRTL---VEQARKLGLHGVAIADHDTTA--GWDEATEASEEIGLPLLLGT 74 (301)
T ss_dssp SEEEEECCTTT-TCSSCHHHH---HHHHHHTTCSEEEECCBTCCT--THHHHHHHHHHHTCCEEEEE
T ss_pred eEEeeECCCCC-CCCCCHHHH---HHHHHHcCCCEEEEcCCCccc--cHHHHHHHHHhcCCEEEEEE
No 288
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=36.19 E-value=1.2e+02 Score=26.45 Aligned_cols=59 Identities=14% Similarity=0.103 Sum_probs=36.1
Q ss_pred HhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHc--CCcEEEEcCCchhhHHHH-HHHHHcCCCC
Q 020079 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL--GALAMVHAENGDAVFEGQ-KRMIELGITG 255 (331)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~--g~~v~~H~e~~~~~~~~~-~~~~~~G~~~ 255 (331)
+.|++.|.+. +.. -..+++.+.++++..++. ++++.+|+.+........ ....+.|...
T Consensus 180 ~~Ga~~i~l~-DT~--G~~~P~~v~~lv~~l~~~~p~~~i~~H~Hnd~GlA~AN~laAv~aGa~~ 241 (337)
T 3ble_A 180 KEHIERIFLP-DTL--GVLSPEETFQGVDSLIQKYPDIHFEFHGHNDYDLSVANSLQAIRAGVKG 241 (337)
T ss_dssp TSCCSEEEEE-CTT--CCCCHHHHHHHHHHHHHHCTTSCEEEECBCTTSCHHHHHHHHHHTTCSE
T ss_pred HcCCCEEEEe-cCC--CCcCHHHHHHHHHHHHHhcCCCeEEEEecCCcchHHHHHHHHHHhCCCE
Confidence 6788876442 222 235678888887776554 789999997765543332 2234556543
No 289
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=36.11 E-value=1.7e+02 Score=23.71 Aligned_cols=102 Identities=15% Similarity=-0.079 Sum_probs=53.2
Q ss_pred hHHHHHHHHHhCCceEEecCcCC-CCCcHHHHHHHHHHHhccceeecc-ccccccCCChhhHHHHHHHHHHhCCCeEEEE
Q 020079 126 DFFSGQAAALAGGTTMHIDFVIP-INGSLTAGFEAYEKKAKNSCMDYG-FHMAITKWDEVVSDEMEVMVKEKGINSFKFF 203 (331)
Q Consensus 126 ~~~~~~~~~l~~GvTtv~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~ 203 (331)
++....+.+.+.|+..+--.... ......+.++..++......+.+. .+.... ...+..+...+.++.-|+..+.+.
T Consensus 31 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~-~~~~~~~~~i~~A~~lGa~~v~~~ 109 (257)
T 3lmz_A 31 DLDTTLKTLERLDIHYLCIKDFHLPLNSTDEQIRAFHDKCAAHKVTGYAVGPIYM-KSEEEIDRAFDYAKRVGVKLIVGV 109 (257)
T ss_dssp CHHHHHHHHHHTTCCEEEECTTTSCTTCCHHHHHHHHHHHHHTTCEEEEEEEEEE-CSHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CHHHHHHHHHHhCCCEEEEecccCCCCCCHHHHHHHHHHHHHcCCeEEEEecccc-CCHHHHHHHHHHHHHhCCCEEEec
Confidence 34455677788899887522211 111112222333322222111111 111111 122333444444546788887653
Q ss_pred EecCCCCcCCHHHHHHHHHHHHHcCCcEEEEcC
Q 020079 204 MAYKGSFMINDELLIEGFKRCKSLGALAMVHAE 236 (331)
Q Consensus 204 ~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e 236 (331)
. ..+.++++.+.|+++|+.+.+|..
T Consensus 110 p--------~~~~l~~l~~~a~~~gv~l~lEn~ 134 (257)
T 3lmz_A 110 P--------NYELLPYVDKKVKEYDFHYAIHLH 134 (257)
T ss_dssp E--------CGGGHHHHHHHHHHHTCEEEEECC
T ss_pred C--------CHHHHHHHHHHHHHcCCEEEEecC
Confidence 2 247889999999999999999965
No 290
>2qt3_A N-isopropylammelide isopropyl amidohydrolase; N-isopropylammelide isopropylaminohydrolase ATZC, structural genomics, NYSGXRC, target 9364B; 2.24A {Pseudomonas SP}
Probab=36.00 E-value=1.2e+02 Score=26.58 Aligned_cols=38 Identities=13% Similarity=-0.031 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHcCC---cEEEEcCCchh-----hHHHHHHHHHcCC
Q 020079 216 LLIEGFKRCKSLGA---LAMVHAENGDA-----VFEGQKRMIELGI 253 (331)
Q Consensus 216 ~l~~~~~~A~~~g~---~v~~H~e~~~~-----~~~~~~~~~~~G~ 253 (331)
.++.+++.+++.|+ ....|+..... ..+..+.+.+.|.
T Consensus 228 ~~~~~~~~~~~~g~~~~~~i~H~~~~~~~~~~~~~~~~~~l~~~g~ 273 (403)
T 2qt3_A 228 SINRLAQKTIENGYKGRVTTSHAWCFADAPSEWLDEAIPLYKDSGM 273 (403)
T ss_dssp HHHHHHHHHHHTTCTTSEEEEECTHHHHSCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHcCCCCCeEEEehhhhccCChhhHHHHHHHHHHcCC
Confidence 45556777778876 56778743221 1234455666665
No 291
>3aam_A Endonuclease IV, endoiv; DNA repair, base excision repair, BER, TIM barrel, endonucle hydrolase, structural genomics, NPPSFA; 1.58A {Thermus thermophilus}
Probab=35.99 E-value=1.8e+02 Score=23.79 Aligned_cols=21 Identities=24% Similarity=0.395 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHcCCcE-EEEc
Q 020079 215 ELLIEGFKRCKSLGALA-MVHA 235 (331)
Q Consensus 215 ~~l~~~~~~A~~~g~~v-~~H~ 235 (331)
+.+++.++.|++.|.+. .+|.
T Consensus 88 ~~~~~~i~~a~~lGa~~vv~h~ 109 (270)
T 3aam_A 88 ASLADDLEKAALLGVEYVVVHP 109 (270)
T ss_dssp HHHHHHHHHHHHHTCCEEEECC
T ss_pred HHHHHHHHHHHHcCCCEEEECC
Confidence 34566666666666653 3454
No 292
>2hnh_A DNA polymerase III alpha subunit; DNA replication, nucleotidyltransferase, beta, PHP, transferase; HET: DNA; 2.30A {Escherichia coli} PDB: 2hqa_A*
Probab=35.97 E-value=60 Score=32.79 Aligned_cols=37 Identities=16% Similarity=0.074 Sum_probs=28.2
Q ss_pred ecccccccccccCCC-CCCCChhhHHHHHHHHHhCCceEEe
Q 020079 104 MPGGIDPHTHLAMEF-MGSETIDDFFSGQAAALAGGTTMHI 143 (331)
Q Consensus 104 ~PG~ID~H~H~~~~~-~~~~~~~~~~~~~~~~l~~GvTtv~ 143 (331)
|+.|+|+|+|...++ -|..+++++ .+.|...|...+.
T Consensus 3 M~~~vdLH~HT~~S~lDG~~~~~el---v~~A~~~Gl~alA 40 (910)
T 2hnh_A 3 EPRFVHLRVHSDYSMIDGLAKTAPL---VKKAAALGMPALA 40 (910)
T ss_dssp CCCCCCCCBCCGGGSSSCCSCHHHH---HHHHHHTTCSEEE
T ss_pred CCceeeecccccCchhcccCCHHHH---HHHHHHCCCCEEE
Confidence 456999999998874 456667766 6777888988765
No 293
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=35.69 E-value=1.8e+02 Score=23.72 Aligned_cols=98 Identities=12% Similarity=0.105 Sum_probs=53.0
Q ss_pred HHHHHHHHHHhCCCeEEE-EEecCCC--CcCCHHHHHHHHHHHHHcCCcEEEEc--CCchhhHHHHHHHHHcCCCCcccc
Q 020079 185 SDEMEVMVKEKGINSFKF-FMAYKGS--FMINDELLIEGFKRCKSLGALAMVHA--ENGDAVFEGQKRMIELGITGPEGH 259 (331)
Q Consensus 185 ~~~~~~~~~~~g~~~ik~-~~~~~~~--~~~~~~~l~~~~~~A~~~g~~v~~H~--e~~~~~~~~~~~~~~~G~~~~~~~ 259 (331)
.++++.+. +.|++.+.+ .++.+.. .....+.++++.+.. ..++++.+|. +++...
T Consensus 20 ~~~i~~l~-~~g~d~~h~DVmDg~Fvpn~~~G~~~v~~ir~~~-~~~~~~dvhLmv~~p~~~------------------ 79 (228)
T 3ovp_A 20 GAECLRML-DSGADYLHLDVMDGHFVPNITFGHPVVESLRKQL-GQDPFFDMHMMVSKPEQW------------------ 79 (228)
T ss_dssp HHHHHHHH-HTTCSCEEEEEEBSSSSSCBCBCHHHHHHHHHHH-CSSSCEEEEEECSCGGGG------------------
T ss_pred HHHHHHHH-HcCCCEEEEEecCCCcCcccccCHHHHHHHHHhh-CCCCcEEEEEEeCCHHHH------------------
Confidence 34555554 678886644 2344433 234567666664432 0257777774 544321
Q ss_pred cccCChHHHHHHHHHHHHHHHhcCCCEEEEeCCC-HHHHHHHHHHHHcCCCEEEecCCcc
Q 020079 260 ALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMS-MDAMEEIAKARKAGPNFLNTTIPLC 318 (331)
Q Consensus 260 ~~~~~~~~e~~~i~~~~~l~~~~g~~~~i~H~~~-~~~~~~i~~~~~~Gi~v~~~~~p~~ 318 (331)
++.+.+.|+.....|.-. ....+.++.+|+.|+.+.+.++|..
T Consensus 80 ----------------i~~~~~aGad~itvH~Ea~~~~~~~i~~i~~~G~k~gval~p~t 123 (228)
T 3ovp_A 80 ----------------VKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIKPGT 123 (228)
T ss_dssp ----------------HHHHHHHTCSEEEEEGGGCSCHHHHHHHHHHTTCEEEEEECTTS
T ss_pred ----------------HHHHHHcCCCEEEEccCCchhHHHHHHHHHHcCCCEEEEEcCCC
Confidence 122334566665666522 2234567777777877777666654
No 294
>3qi7_A Putative transcriptional regulator; periplasmic binding protein-like, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.86A {Clostridium difficile}
Probab=34.96 E-value=2.4e+02 Score=25.09 Aligned_cols=37 Identities=14% Similarity=-0.051 Sum_probs=24.4
Q ss_pred hcCCCEEEEeCCCHHHHHHHHHHHHcCCCEEEecCCc
Q 020079 281 FVNTPLYVVHVMSMDAMEEIAKARKAGPNFLNTTIPL 317 (331)
Q Consensus 281 ~~g~~~~i~H~~~~~~~~~i~~~~~~Gi~v~~~~~p~ 317 (331)
+++...-+--++...++-.++.+++.|+.|--+.||.
T Consensus 222 ~~~~~TAIFatND~mAiG~ikal~e~Gi~VPed~~ps 258 (371)
T 3qi7_A 222 KYGKDINVFGVNEYMDEVILTKALELKYIVAEQSNPS 258 (371)
T ss_dssp HHCSCCEEEESSHHHHHHHHHHHHHHCCBBCCCSSCC
T ss_pred ccCCCcEEEECCHHHHHHHHHHHHHcCCccCCCCCCC
Confidence 4444333333335667778999999999987666654
No 295
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=34.53 E-value=85 Score=25.89 Aligned_cols=20 Identities=10% Similarity=-0.130 Sum_probs=13.9
Q ss_pred HHHHHHHHHcCCcEEEEcCC
Q 020079 218 IEGFKRCKSLGALAMVHAEN 237 (331)
Q Consensus 218 ~~~~~~A~~~g~~v~~H~e~ 237 (331)
+++.+.|+++|+.+.+|..+
T Consensus 125 ~~l~~~a~~~Gv~l~lE~~~ 144 (281)
T 3u0h_A 125 RQVAVELLPLGMRVGLEYVG 144 (281)
T ss_dssp HHHHHHHGGGTCEEEEECCC
T ss_pred HHHHHHHHHcCCEEEEEecc
Confidence 45566777888888877543
No 296
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=34.03 E-value=2.5e+02 Score=24.84 Aligned_cols=108 Identities=11% Similarity=-0.035 Sum_probs=54.0
Q ss_pred CCCChhhHHHHHHHHHhCCceEEecCcCCCCC---cHHH---HHHHHHHHh-ccceeeccccccccCCChhhHHHHHHHH
Q 020079 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTA---GFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMV 192 (331)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (331)
+..+.+.+....+..+.+||..++-.++.+.. +..+ .++...+.. .+.++-. ..+. ....+..+..+...
T Consensus 75 g~ID~~al~~lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~grvpVia--Gvg~-~st~eai~la~~A~ 151 (360)
T 4dpp_A 75 GRFDLEAYDDLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIG--NTGS-NSTREAIHATEQGF 151 (360)
T ss_dssp SSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEE--ECCC-SSHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhCCCCeEEE--ecCC-CCHHHHHHHHHHHH
Confidence 34566677777777889999988865543332 2222 233332222 2222221 1111 12233444443333
Q ss_pred HHhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEE
Q 020079 193 KEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVH 234 (331)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H 234 (331)
+.|++++-+..-+ -...+++.+.+-++...+. +|+.+.
T Consensus 152 -~~Gadavlvv~Py--Y~k~sq~gl~~hf~~IA~a-~PiilY 189 (360)
T 4dpp_A 152 -AVGMHAALHINPY--YGKTSIEGLIAHFQSVLHM-GPTIIY 189 (360)
T ss_dssp -HTTCSEEEEECCC--SSCCCHHHHHHHHHTTGGG-SCEEEE
T ss_pred -HcCCCEEEEcCCC--CCCCCHHHHHHHHHHHHHh-CCEEEE
Confidence 6899887554221 1223666665555443333 588776
No 297
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=33.77 E-value=1.6e+02 Score=23.92 Aligned_cols=23 Identities=17% Similarity=0.124 Sum_probs=14.2
Q ss_pred HHHHHHHHHHHHcCCcEEEEcCC
Q 020079 215 ELLIEGFKRCKSLGALAMVHAEN 237 (331)
Q Consensus 215 ~~l~~~~~~A~~~g~~v~~H~e~ 237 (331)
+.++++.+.|+++|+.+.+|..+
T Consensus 124 ~~l~~l~~~a~~~gv~l~~E~~~ 146 (260)
T 1k77_A 124 DNIRYAADRFAPHGKRILVEALS 146 (260)
T ss_dssp HHHHHHHHHHGGGTCEEEECCCC
T ss_pred HHHHHHHHHHHHcCCEEEEEeCC
Confidence 34556666677777777666543
No 298
>3n6q_A YGHZ aldo-keto reductase; TIM barrel, oxidoreductase; 1.80A {Escherichia coli} SCOP: c.1.7.0 PDB: 4ast_A 4aub_A*
Probab=33.56 E-value=2.4e+02 Score=24.45 Aligned_cols=112 Identities=13% Similarity=0.044 Sum_probs=54.5
Q ss_pred ChhhHHHHHHHHHhCCceEEecCcCCCC--CcHHHHHHHHHHH---hcc--ceee--ccccc--ccc---CCChhhHHHH
Q 020079 123 TIDDFFSGQAAALAGGTTMHIDFVIPIN--GSLTAGFEAYEKK---AKN--SCMD--YGFHM--AIT---KWDEVVSDEM 188 (331)
Q Consensus 123 ~~~~~~~~~~~~l~~GvTtv~d~~~~~~--~~~~~~~~~~~~~---~~~--~~~~--~~~~~--~~~---~~~~~~~~~~ 188 (331)
..+......+.++..|++.+=....+.+ +...+.+-...+. ..+ ..+. ++... ... ...+...+.+
T Consensus 41 ~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~~G~sE~~lG~al~~~~~~~R~~~~I~TK~g~~~~~~~~~~~~s~~~i~~~~ 120 (346)
T 3n6q_A 41 ALESQRAILRKAFDLGITHFDLANNYGPPPGSAEENFGRLLREDFAAYRDELIISTKAGYDMWPGPYGSGGSRKYLLASL 120 (346)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECCTTCTTTTTHHHHHHHHHHHHHCTTTGGGCEEEEEECSCCSSSTTSSSSCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEECccccCCCCCcHHHHHHHHHHhhcccccccEEEEEEecccCCCCCCCCCCCHHHHHHHH
Confidence 4566667788899999997742222332 2234444333222 112 1111 11110 000 0122344556
Q ss_pred HHHHHHhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEE
Q 020079 189 EVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVH 234 (331)
Q Consensus 189 ~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H 234 (331)
++-.++-|.+.+.++.--......+.++..+.++..++.|+.-.+=
T Consensus 121 e~SL~rL~~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iG 166 (346)
T 3n6q_A 121 DQSLKRMGLEYVDIFYSHRVDENTPMEETASALAHAVQSGKALYVG 166 (346)
T ss_dssp HHHHHHHTCSCEEEEEECSCCTTSCHHHHHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHhCCCcEeEEEEeCCCCCCCHHHHHHHHHHHHHcCCeeEEE
Confidence 5555567888887765311112234455556667777777654443
No 299
>3b3d_A YTBE protein, putative morphine dehydrogenase; aldo-keto reductase, oxidoreductase; 2.30A {Bacillus subtilis}
Probab=33.38 E-value=2.3e+02 Score=24.24 Aligned_cols=109 Identities=9% Similarity=0.030 Sum_probs=54.4
Q ss_pred hhhHHHHHHHHHhCCceEEecCcCCCCC-cHHHHHHHHHHHh--cc--ceeeccccccccCCChhhHHHHHHHHHHhCCC
Q 020079 124 IDDFFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKA--KN--SCMDYGFHMAITKWDEVVSDEMEVMVKEKGIN 198 (331)
Q Consensus 124 ~~~~~~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 198 (331)
.++.....+.++..|++.+=....+++. ...+.+....... .+ ..+..... ......+...+.+++-.++-|.+
T Consensus 64 ~~e~~~~v~~Al~~Gi~~~DTA~~YgnE~~vG~~l~~~~~~~~i~r~~~~i~~k~~-~~~~~~~~~~~~~e~SL~rL~~d 142 (314)
T 3b3d_A 64 GSELVNAVKTAIVHGYRSIDTAAIYGNEAGVGEGIREGIEEAGISREDLFITSKVW-NADLGYEETLAAFETSLSKLGLD 142 (314)
T ss_dssp SHHHHHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHHHHHHTCCGGGCEEEEEEC-GGGCSHHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHHcCCCEEECccccCChHHHHHHHHHHHHHhCCCcccccccccCc-CCCCCHHHHHHHHHHHHHHhCCC
Confidence 4556667888999999987422223322 1122222222111 11 11111000 01111233445555555567888
Q ss_pred eEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEE
Q 020079 199 SFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVH 234 (331)
Q Consensus 199 ~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H 234 (331)
.|.+|.- |.+.....++..+.++..++.|+.-.+=
T Consensus 143 yiDL~~~-H~~~~~~~~e~~~al~~l~~~Gkir~iG 177 (314)
T 3b3d_A 143 YLDLYLI-HWPVEGKYKEAWRALETLYKEGRIKAIG 177 (314)
T ss_dssp CEEEEEE-SSCCTTTHHHHHHHHHHHHHTTSEEEEE
T ss_pred ccccccc-ccccccchhHHHHHHHHHHHCCCEeEEE
Confidence 8887753 3333344555556677778888765444
No 300
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=32.97 E-value=2e+02 Score=23.45 Aligned_cols=21 Identities=24% Similarity=0.207 Sum_probs=12.8
Q ss_pred HHHHHHHHHHHHcCCcEE-EEc
Q 020079 215 ELLIEGFKRCKSLGALAM-VHA 235 (331)
Q Consensus 215 ~~l~~~~~~A~~~g~~v~-~H~ 235 (331)
+.+++.++.|++.|.+.. +|.
T Consensus 84 ~~~~~~i~~A~~lGa~~v~~~~ 105 (264)
T 1yx1_A 84 PELEPTLRRAEACGAGWLKVSL 105 (264)
T ss_dssp TTHHHHHHHHHHTTCSEEEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEec
Confidence 556677777777776533 443
No 301
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=32.84 E-value=2e+02 Score=23.38 Aligned_cols=42 Identities=17% Similarity=0.077 Sum_probs=25.1
Q ss_pred HHHhcCCCEEEEeCC---CHHHHHHHHHHHHcCCCEEEecCCccc
Q 020079 278 LAEFVNTPLYVVHVM---SMDAMEEIAKARKAGPNFLNTTIPLCD 319 (331)
Q Consensus 278 l~~~~g~~~~i~H~~---~~~~~~~i~~~~~~Gi~v~~~~~p~~~ 319 (331)
.+.+.|+.....|.- .....+.++.+++.|..+.+.++|++.
T Consensus 80 ~~~~aGadgv~vh~e~~~~~~~~~~~~~i~~~g~~~gv~~~p~t~ 124 (230)
T 1tqj_A 80 DFAKAGADIISVHVEHNASPHLHRTLCQIRELGKKAGAVLNPSTP 124 (230)
T ss_dssp HHHHHTCSEEEEECSTTTCTTHHHHHHHHHHTTCEEEEEECTTCC
T ss_pred HHHHcCCCEEEECcccccchhHHHHHHHHHHcCCcEEEEEeCCCc
Confidence 344456655555543 233446677777888777777766543
No 302
>2zvi_A 2,3-diketo-5-methylthiopentyl-1-phosphate enolase; methionine salvage pathway, amino-acid biosynthesis, isomerase, magnesium, metal- binding; 2.30A {Bacillus subtilis}
Probab=32.76 E-value=2.8e+02 Score=25.12 Aligned_cols=107 Identities=11% Similarity=0.098 Sum_probs=58.7
Q ss_pred CChhhHHHHHHHHHhCCceEEecCcCCCCC---cHHHHHHHHHHH----hccceeeccccccccCCChhhHHHHHHHHHH
Q 020079 122 ETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTAGFEAYEKK----AKNSCMDYGFHMAITKWDEVVSDEMEVMVKE 194 (331)
Q Consensus 122 ~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (331)
.+++.+.......+.+|+--+-|-....+. ...+.+....+. .....-.-.+...++...++..+..+... +
T Consensus 166 Ls~~~~a~~~ye~~~GGlDfiKDDE~l~~qpf~p~~eRv~~v~eai~ra~~eTGe~k~y~~NiT~~~~em~~Ra~~a~-e 244 (425)
T 2zvi_A 166 RDLSDIKEQLRQQALGGVDLIKDDEIFFETGLAPFETRIAEGKQILKETYEQTGHKTLYAVNLTGRTADLKDKARRAA-E 244 (425)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEECCTTCCCSSSSCHHHHHHHHHHHHHHHHHHHSCCCEEEEECCSCGGGHHHHHHHHH-H
T ss_pred CCHHHHHHHHHHHHhCCCCeeeCCCCCCCCCCccHHHHHHHHHHHHHHHHHHhCCcceeeCcCCCCHHHHHHHHHHHH-H
Confidence 577888777888899998877765443332 334443322222 11111111122233434445445444444 6
Q ss_pred hCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEc
Q 020079 195 KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA 235 (331)
Q Consensus 195 ~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~ 235 (331)
.|...+- +++ ....-..+..+.+.+ +.+++++.|-
T Consensus 245 ~G~~~~m--vd~---~~~G~~a~~~l~~~~-~~~l~lh~Hr 279 (425)
T 2zvi_A 245 LGADALL--FNV---FAYGLDVMQGLAEDP-EIPVPIMAHP 279 (425)
T ss_dssp TTCSEEE--ECG---GGTCHHHHHHHHHCT-TCCSCEEECC
T ss_pred hCCCeEE--Eee---eccChHHHHHHHHhC-cCCCEEEecc
Confidence 7776542 222 223456677777777 7899999994
No 303
>2x5e_A UPF0271 protein PA4511; unknown function; HET: CIT; 2.30A {Pseudomonas aeruginosa} PDB: 2xu2_A*
Probab=32.70 E-value=78 Score=26.44 Aligned_cols=18 Identities=22% Similarity=0.228 Sum_probs=14.1
Q ss_pred HHHHHHHHcCCCEEEecC
Q 020079 298 EEIAKARKAGPNFLNTTI 315 (331)
Q Consensus 298 ~~i~~~~~~Gi~v~~~~~ 315 (331)
+..+.+++.|+++..+..
T Consensus 157 ~~~~~A~~~Gl~~~~E~F 174 (252)
T 2x5e_A 157 RELELADEADVPLLFEAF 174 (252)
T ss_dssp HHHHHHHHHTCCEEEEEE
T ss_pred HHHHHHHHcCCcEEEEEe
Confidence 577888889999887643
No 304
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=32.22 E-value=1.8e+02 Score=25.13 Aligned_cols=107 Identities=7% Similarity=-0.060 Sum_probs=50.6
Q ss_pred ChhhHHHHHHHHHHhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEc---CCchhhHHHHHH-HHHc---CC
Q 020079 181 DEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA---ENGDAVFEGQKR-MIEL---GI 253 (331)
Q Consensus 181 ~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~---e~~~~~~~~~~~-~~~~---G~ 253 (331)
+-+..+.+.+.+++.+...|- ..++..........+..+.+.|++.++||.+|. .+.+.+....+. +.+. |+
T Consensus 36 n~e~~~Avl~AAee~~sPvIl-q~s~g~~~y~g~~~~~~~~~~A~~~~VPVaLHlDHg~~~e~i~~ai~~~~~~~~~~GF 114 (306)
T 3pm6_A 36 NLEGILAIIRAAEHKRSPAMI-LLFPWAIQYADSLLVRTAASACRAASVPITLHLDHAQDPEIIKRAADLSRSETHEPGF 114 (306)
T ss_dssp SHHHHHHHHHHHHHTTCCEEE-EECHHHHHHHTTHHHHHHHHHHHHCSSCEEEEEEEECCHHHHHHHHHTC------CCC
T ss_pred CHHHHHHHHHHHHHhCCCEEE-EcChhHHhhccHHHHHHHHHHHHHCCCCEEEEcCCCCCHHHHHHHHHhhhhccCCCCC
Confidence 344555555555455554432 122211111233456667788899999999996 333333222221 1111 44
Q ss_pred CCcccccccCChHHHHHHHHHHHHHHHhcCCCEEE
Q 020079 254 TGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYV 288 (331)
Q Consensus 254 ~~~~~~~~~~~~~~e~~~i~~~~~l~~~~g~~~~i 288 (331)
.+-=.=....|...-....++.++++...|+.+..
T Consensus 115 tSVMiDgS~~p~eENi~~Tk~vv~~ah~~gvsVEa 149 (306)
T 3pm6_A 115 DSIMVDMSHFSKEENLRLTRELVAYCNARGIATEA 149 (306)
T ss_dssp SEEEECCTTSCHHHHHHHHHHHHHHHHTTTCEEEE
T ss_pred CEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 32110011223222223346788888887765543
No 305
>4i6k_A Amidohydrolase family protein; enzyme function initiative, isomerase, structural; HET: CIT; 2.28A {Acinetobacter baumannii}
Probab=31.99 E-value=1.6e+02 Score=24.73 Aligned_cols=44 Identities=2% Similarity=-0.079 Sum_probs=24.9
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCH--------HHHHHHHHHHHcCCCEEEecCC
Q 020079 272 TTRAIRLAEFVNTPLYVVHVMSM--------DAMEEIAKARKAGPNFLNTTIP 316 (331)
Q Consensus 272 i~~~~~l~~~~g~~~~i~H~~~~--------~~~~~i~~~~~~Gi~v~~~~~p 316 (331)
+.+..+++++...++.+.|+... ...+.+.++.+. -|++++++-
T Consensus 162 l~~~~~~l~~~p~~~Vi~H~g~p~~~~g~~~~~~~~~~~l~~~-~nv~~k~Sg 213 (294)
T 4i6k_A 162 LVQLLPQLNEYSFDVVIDHFGRVDPVKGIEDPDYQKFLSLLNV-KQHWIKVSG 213 (294)
T ss_dssp HHHHHHHHTTSSSCEEESGGGCCCTTTCTTCHHHHHHHHHCCT-TTEEEECCC
T ss_pred HHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhC-CCEEEEecc
Confidence 34455666666788888888642 123333333222 367777663
No 306
>2dfa_A Hypothetical UPF0271 protein TTHB195; lactam utilization protein, structural genomics, NPPSFA; 1.90A {Thermus thermophilus} SCOP: c.6.2.5
Probab=31.92 E-value=2e+02 Score=24.02 Aligned_cols=24 Identities=17% Similarity=0.253 Sum_probs=17.7
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEcC
Q 020079 213 NDELLIEGFKRCKSLGALAMVHAE 236 (331)
Q Consensus 213 ~~~~l~~~~~~A~~~g~~v~~H~e 236 (331)
++..+++.+++|+++|+.|-.|..
T Consensus 41 Dp~~M~~tv~lA~~~gV~IGAHPg 64 (250)
T 2dfa_A 41 SPGRILEAVRLAKAHGVAVGAHPG 64 (250)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECC
T ss_pred CHHHHHHHHHHHHHcCCeEecCCC
Confidence 667777777777777777777753
No 307
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=31.67 E-value=2.5e+02 Score=24.24 Aligned_cols=106 Identities=10% Similarity=0.018 Sum_probs=55.5
Q ss_pred ChhhHHHHHHHHHHhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHH--cCCcEEEEcCCchhhHHHHHHHHHcCCCCccc
Q 020079 181 DEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKS--LGALAMVHAENGDAVFEGQKRMIELGITGPEG 258 (331)
Q Consensus 181 ~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~--~g~~v~~H~e~~~~~~~~~~~~~~~G~~~~~~ 258 (331)
+-+..+.+.+.+++.+...|- ..++........+.+..++..+.+ .++||.+|..-....+.. ....+.|+.+-=.
T Consensus 26 n~e~~~avi~AAee~~sPvIl-q~s~g~~~y~g~~~~~~~v~~aa~~~~~VPValHLDHg~~~e~~-~~ai~~GFtSVMi 103 (307)
T 3n9r_A 26 NFEMLNAIFEAGNEENSPLFI-QASEGAIKYMGIDMAVGMVKIMCERYPHIPVALHLDHGTTFESC-EKAVKAGFTSVMI 103 (307)
T ss_dssp SHHHHHHHHHHHHHHTCCEEE-EEEHHHHHHHCHHHHHHHHHHHHHHSTTSCEEEEEEEECSHHHH-HHHHHHTCSEEEE
T ss_pred CHHHHHHHHHHHHHhCCCEEE-EcChhhhhhCCHHHHHHHHHHHHHhcCCCcEEEECCCCCCHHHH-HHHHHhCCCcEEE
Confidence 345556666666555655442 222222222355677777766655 689999996222222222 3345667643211
Q ss_pred ccccCChHHHHHHHHHHHHHHHhcCCCEEE
Q 020079 259 HALSRPPLLEGEATTRAIRLAEFVNTPLYV 288 (331)
Q Consensus 259 ~~~~~~~~~e~~~i~~~~~l~~~~g~~~~i 288 (331)
=....|...-....++.++++...|+.+..
T Consensus 104 DgS~~p~eeNi~~Tk~vv~~ah~~gvsVEa 133 (307)
T 3n9r_A 104 DASHHAFEENLELTSKVVKMAHNAGVSVEA 133 (307)
T ss_dssp CCTTSCHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred ECCCCCHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 111223222233457788899988876543
No 308
>1bwv_A Rubisco, protein (ribulose bisphosphate carboxylase); carbon dioxide fixation, complex (rubisco-reaction intermedi high specificity factor; HET: KCX CAP; 2.40A {Galdieria partita} SCOP: c.1.14.1 d.58.9.1 PDB: 1iwa_A 1bxn_A
Probab=30.80 E-value=3.3e+02 Score=25.25 Aligned_cols=108 Identities=11% Similarity=-0.014 Sum_probs=59.3
Q ss_pred CChhhHHHHHHHHHhCCceEEecCcCCCCC---cHHHHHHHHHHH----hccceeeccccccccCC-ChhhHHHHHHHHH
Q 020079 122 ETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTAGFEAYEKK----AKNSCMDYGFHMAITKW-DEVVSDEMEVMVK 193 (331)
Q Consensus 122 ~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 193 (331)
++++.+.......+.+|+--+-|-....+. ...+.+....+. .....-.-.+...++.. .++..+..+...
T Consensus 189 Lsp~~~a~~~ye~~~GGlDfiKDDE~l~~qpf~p~~eR~~~v~eai~rA~~eTGe~k~~~~NiTa~~~~eM~~Ra~~a~- 267 (493)
T 1bwv_A 189 LSGKNYGRVVYEALKGGLDFVKDDENINSQPFMRWRERYLFTMEAVNKASAATGEVKGHYLNVTAATMEEMYARANFAK- 267 (493)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEECCTTCSSBTTBCHHHHHHHHHHHHHHHHHHHTSCCEEEEECCCSSHHHHHHHHHHHH-
T ss_pred CCHHHHHHHHHHHHhcCCCcccCccccCCCCCCcHHHHHHHHHHHHHHHHHhhCCcceeeccCCCCCHHHHHHHHHHHH-
Confidence 577888888888899998877765443322 334433322222 11111111112223333 334444443333
Q ss_pred HhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEcC
Q 020079 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAE 236 (331)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e 236 (331)
+.|...+- .++ .. .-..+..+.+.+++.++++|.|-.
T Consensus 268 e~G~~~~m--vd~---~~-G~~a~~~l~~~~r~~~l~lh~HRA 304 (493)
T 1bwv_A 268 ELGSVIIM--IDL---VI-GYTAIQTMAKWARDNDMILHLHRA 304 (493)
T ss_dssp HTTCSEEE--EEG---GG-CHHHHHHHHHHHHHTTCEEEEECT
T ss_pred HhCCCeEE--Eec---cc-ChHHHHHHHHHHhhcCcEEEecCC
Confidence 57776542 332 12 456778888888889999999943
No 309
>3v0s_A Perakine reductase; AKR superfamily, oxidoreductase; HET: MLZ M3L MLY ATR; 1.77A {Rauvolfia serpentina} PDB: 3v0u_A 3v0t_A* 3uyi_A*
Probab=30.70 E-value=2.6e+02 Score=24.09 Aligned_cols=112 Identities=14% Similarity=0.061 Sum_probs=56.4
Q ss_pred ChhhHHHHHHHHHhCCceEEecCcCCCC-CcHHHHHHHHHHHhcc--ceee--cccccc------ccCCChhhHHHHHHH
Q 020079 123 TIDDFFSGQAAALAGGTTMHIDFVIPIN-GSLTAGFEAYEKKAKN--SCMD--YGFHMA------ITKWDEVVSDEMEVM 191 (331)
Q Consensus 123 ~~~~~~~~~~~~l~~GvTtv~d~~~~~~-~~~~~~~~~~~~~~~~--~~~~--~~~~~~------~~~~~~~~~~~~~~~ 191 (331)
..+......+.++..|++.+=....+.. +...+.+-...+...+ ..+. +..... .....+...+.+++.
T Consensus 32 ~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~G~sE~~lG~al~~~~R~~~~i~TK~~~~~~~~~~~~~~~~~~~i~~~~~~S 111 (337)
T 3v0s_A 32 PEEQGIAVIKEAFNCGITFFDTSDIYGENGSNEELLGKALKQLPREXIQVGTKFGIHEIGFSGVKAXGTPDYVRSCCEAS 111 (337)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECCTTSSSTTHHHHHHHHHHTTSCGGGCEEEEEECEEEEETTEEEECCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEChhhhCCCCcHHHHHHHHHhhcCCcceEEEeeeccccCCCCcccCCCCHHHHHHHHHHH
Confidence 4456666778899999997642222332 1234444443332222 1111 111100 011123345556666
Q ss_pred HHHhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEE
Q 020079 192 VKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVH 234 (331)
Q Consensus 192 ~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H 234 (331)
.++-|.+.+.++.--......+.++..+.++..++.|+.-.+=
T Consensus 112 L~rLg~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iG 154 (337)
T 3v0s_A 112 LKRLDVDYIDLFYIHRIDTTVPIEITMGELXXLVEEGKIXYVG 154 (337)
T ss_dssp HHHHTCSCEEEEEESSCCTTSCHHHHHHHHHHHHHTTSEEEEE
T ss_pred HHHhCCCCeeEEEecCCCCCCCHHHHHHHHHHHHHCCCeeEEe
Confidence 6567888887765321122234556666777777778765444
No 310
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=30.66 E-value=75 Score=27.47 Aligned_cols=123 Identities=15% Similarity=0.085 Sum_probs=65.8
Q ss_pred HHHHHHHHhCCCeEE--EEEecCCCCc-CCHHHHHHHHHHHHHcCCcEEEE--cC-----------CchhhHHHHHHHHH
Q 020079 187 EMEVMVKEKGINSFK--FFMAYKGSFM-INDELLIEGFKRCKSLGALAMVH--AE-----------NGDAVFEGQKRMIE 250 (331)
Q Consensus 187 ~~~~~~~~~g~~~ik--~~~~~~~~~~-~~~~~l~~~~~~A~~~g~~v~~H--~e-----------~~~~~~~~~~~~~~ 250 (331)
.+++.. +.|.+.+| +.+.+..... -..+.+.++.+.|+++|+|+.++ .. +++.+....+...+
T Consensus 133 sVe~Av-rlGADaV~~l~~i~~Gs~~e~~~l~~la~vv~ea~~~GlP~~~ep~~y~r~gg~v~~~~dp~~Va~aaRiAaE 211 (307)
T 3fok_A 133 NVSSMV-DRGVDFAKTLVRINLSDAGTAPTLEATAHAVNEAAAAQLPIMLEPFMSNWVNGKVVNDLSTDAVIQSVAIAAG 211 (307)
T ss_dssp CHHHHH-HHTCCEEEEEEEECTTCTTHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEEETTEEEECCSHHHHHHHHHHHHT
T ss_pred CHHHHH-HCCCCEEEEEEEECCCChhHHHHHHHHHHHHHHHHHcCCcEEEEeeccccCCCCcCCCCCHHHHHHHHHHHHH
Confidence 345555 67999988 4444433221 12345677889999999999887 21 12223333344566
Q ss_pred cCCCCccccccc-CChHHHHHHHHHHHHHHHhcCCCEEEEeCCC----HHHHHHHHHHHH-cCCC-EEEecCCcc
Q 020079 251 LGITGPEGHALS-RPPLLEGEATTRAIRLAEFVNTPLYVVHVMS----MDAMEEIAKARK-AGPN-FLNTTIPLC 318 (331)
Q Consensus 251 ~G~~~~~~~~~~-~~~~~e~~~i~~~~~l~~~~g~~~~i~H~~~----~~~~~~i~~~~~-~Gi~-v~~~~~p~~ 318 (331)
+|.......... -+ | .+.+..+....++.+.=... .+-++.++.+.+ .|.. +..+-+.++
T Consensus 212 LGADs~~tivK~~y~---e-----~f~~Vv~a~~vPVViaGG~k~~~~~e~L~~v~~A~~~aGa~Gv~vGRNIfQ 278 (307)
T 3fok_A 212 LGNDSSYTWMKLPVV---E-----EMERVMESTTMPTLLLGGEGGNDPDATFASWEHALTLPGVRGLTVGRTLLY 278 (307)
T ss_dssp CSSCCSSEEEEEECC---T-----THHHHGGGCSSCEEEECCSCC--CHHHHHHHHHHTTSTTEEEEEECTTTSS
T ss_pred hCCCcCCCEEEeCCc---H-----HHHHHHHhCCCCEEEeCCCCCCCHHHHHHHHHHHHHhCCCeEEeechhhcc
Confidence 676532221111 11 1 12234444467877775443 345666666666 4532 455555444
No 311
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=30.56 E-value=2.5e+02 Score=23.75 Aligned_cols=110 Identities=10% Similarity=-0.042 Sum_probs=56.5
Q ss_pred CCCChhhHHHHHHHHHhCCceEEecCcCCCCC---cHHHHHHHHHHHhccceeeccccccccC-CChhhHHHHHHHHHHh
Q 020079 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTAGFEAYEKKAKNSCMDYGFHMAITK-WDEVVSDEMEVMVKEK 195 (331)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 195 (331)
+..+.+.+....+..+.+|+..++-.++.+.. +..+..+..+....... .+ ..+... ...+..+..+... +.
T Consensus 15 g~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~-gV--iaGvg~~~t~~ai~la~~A~-~~ 90 (288)
T 2nuw_A 15 GKVNVDALKTHAKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDVTH-KL--IFQVGSLNLNDVMELVKFSN-EM 90 (288)
T ss_dssp SCBCHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTTCS-CE--EEECCCSCHHHHHHHHHHHH-TS
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-Ce--EEeeCCCCHHHHHHHHHHHH-hc
Confidence 34556667777777899999998765543322 33333332222221111 11 122222 2233334343333 67
Q ss_pred CCCeEEEEEecCCCCc-CCHHHHHH-HHHHHHHcCCcEEEEc
Q 020079 196 GINSFKFFMAYKGSFM-INDELLIE-GFKRCKSLGALAMVHA 235 (331)
Q Consensus 196 g~~~ik~~~~~~~~~~-~~~~~l~~-~~~~A~~~g~~v~~H~ 235 (331)
|++++-+.. | .-.. .+++.+.+ .-+.|+..++|+.++.
T Consensus 91 Gadavlv~~-P-~y~~~~s~~~l~~~f~~va~a~~lPiilYn 130 (288)
T 2nuw_A 91 DILGVSSHS-P-YYFPRLPEKFLAKYYEEIARISSHSLYIYN 130 (288)
T ss_dssp CCSEEEECC-C-CSSCSCCHHHHHHHHHHHHHHCCSCEEEEE
T ss_pred CCCEEEEcC-C-cCCCCCCHHHHHHHHHHHHHhcCCCEEEEE
Confidence 999875432 2 1112 36666554 4456777799998873
No 312
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=30.45 E-value=2.2e+02 Score=23.12 Aligned_cols=45 Identities=9% Similarity=-0.050 Sum_probs=27.7
Q ss_pred HHHhCCCeEEEEEecCCC--CcCC-HHHHHHHHHHHHHcCCcEEEEcC
Q 020079 192 VKEKGINSFKFFMAYKGS--FMIN-DELLIEGFKRCKSLGALAMVHAE 236 (331)
Q Consensus 192 ~~~~g~~~ik~~~~~~~~--~~~~-~~~l~~~~~~A~~~g~~v~~H~e 236 (331)
+.+-|+..+.+..+..+. ...- .+.++++.+.|+++|+.+.+|..
T Consensus 94 a~~lG~~~v~~~~g~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~~E~~ 141 (272)
T 2q02_A 94 AQGVGARALVLCPLNDGTIVPPEVTVEAIKRLSDLFARYDIQGLVEPL 141 (272)
T ss_dssp HHHHTCSEEEECCCCSSBCCCHHHHHHHHHHHHHHHHTTTCEEEECCC
T ss_pred HHHhCCCEEEEccCCCchhHHHHHHHHHHHHHHHHHHHcCCEEEEEec
Confidence 334688777553221111 0111 56778888899999999888754
No 313
>3ipw_A Hydrolase TATD family protein; niaid, ssgcid, seattle structural genomics center for infect disease, dysentery, liver abcess; 1.95A {Entamoeba histolytica hm-1}
Probab=30.38 E-value=2.2e+02 Score=24.74 Aligned_cols=26 Identities=27% Similarity=0.254 Sum_probs=14.5
Q ss_pred EEeCCCHHHHHHHHHHHHcCCCEEEec
Q 020079 288 VVHVMSMDAMEEIAKARKAGPNFLNTT 314 (331)
Q Consensus 288 i~H~~~~~~~~~i~~~~~~Gi~v~~~~ 314 (331)
+.||-+++. +.++++.+.|..+++..
T Consensus 197 ViH~FsGs~-e~a~~~l~lG~yis~~G 222 (325)
T 3ipw_A 197 VVHCFDGTE-EEMNQILNEGWDIGVTG 222 (325)
T ss_dssp EECSCCCCH-HHHHHHHHTTCEEEECS
T ss_pred EEEECCCCH-HHHHHHHhcCcEEeeCc
Confidence 336544333 55666666776666544
No 314
>4f0h_A Ribulose bisphosphate carboxylase large chain; alpha beta domain, catalytic domain TIM barrel, carboxylase/oxygenase, nitrosylation; 1.96A {Galdieria sulphuraria} PDB: 4f0k_A 4f0m_A 1bwv_A* 1iwa_A 1bxn_A
Probab=29.75 E-value=3.4e+02 Score=25.13 Aligned_cols=108 Identities=12% Similarity=0.000 Sum_probs=60.9
Q ss_pred CChhhHHHHHHHHHhCCceEEecCcCCCCC---cHHHHHHHHHH----HhccceeeccccccccCC-ChhhHHHHHHHHH
Q 020079 122 ETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTAGFEAYEK----KAKNSCMDYGFHMAITKW-DEVVSDEMEVMVK 193 (331)
Q Consensus 122 ~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 193 (331)
++++.+.......+.+|+--+-|-....+. ...+.+....+ +.....-.-.+...++.. .++..+..+...
T Consensus 189 Ls~~~~a~~~ye~~~GGlDfIKDDE~l~~Qpf~p~~eRv~~v~eai~rA~~eTGe~K~~~~NiTa~~~~eM~~Ra~~a~- 267 (493)
T 4f0h_A 189 LSGKNYGRVVYEALKGGLDFVKDDENINSQPFMRWRERYLFVMEAVNKAAAATGEVKGHYLNVTAATMEEMYARAQLAK- 267 (493)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEECCTTCSSBTTBCHHHHHHHHHHHHHHHHHHHSSCCEEEEECCCSSHHHHHHHHHHHH-
T ss_pred CCHHHHHHHHHHHHhcCCCccccccccCCCCCccHHHHHHHHHHHHHHHHHhHCCcceEEeecCCCCHHHHHHHHHHHH-
Confidence 577888888888899998888766444332 34443333222 221111111112233332 234444444444
Q ss_pred HhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEcC
Q 020079 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAE 236 (331)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e 236 (331)
+.|...+- ++. .. .-..+..+.+.|++.++++|.|-.
T Consensus 268 e~G~~~vm--vd~---~~-G~~a~~~La~~~r~~~l~LH~HRA 304 (493)
T 4f0h_A 268 ELGSVIIM--IDL---VI-GYTAIQTMAKWARDNDMILHLHRA 304 (493)
T ss_dssp HHTCSEEE--EEG---GG-CHHHHHHHHHHHHHHTCEEEEECT
T ss_pred hcCCCeEE--Eec---cc-ccchhHHHHHHHHHcCceEEeccC
Confidence 67777653 232 12 456788888888889999999943
No 315
>1a0c_A Xylose isomerase; ketolisomerase, xylose metabolism, glucose-fructose interconversion, hydride transfer; 2.50A {Thermoanaerobacteriumthermosulfurigenes} SCOP: c.1.15.3 PDB: 1a0d_A 1a0e_A
Probab=29.33 E-value=3.2e+02 Score=24.74 Aligned_cols=42 Identities=10% Similarity=-0.113 Sum_probs=23.6
Q ss_pred HHHhCCCeEEEEEecCCCCcCC--------HHHHHHHHHHHHHcCCcEEE
Q 020079 192 VKEKGINSFKFFMAYKGSFMIN--------DELLIEGFKRCKSLGALAMV 233 (331)
Q Consensus 192 ~~~~g~~~ik~~~~~~~~~~~~--------~~~l~~~~~~A~~~g~~v~~ 233 (331)
+.+.|.+.+.+...+..+...+ ++..+.+.+..++.|+.+..
T Consensus 89 ~a~lG~~~VE~~~~~~~p~~~~~~e~~~~l~~~~~~lk~~l~~~GL~~~~ 138 (438)
T 1a0c_A 89 FDKINAPYFCFHDRDIAPEGDTLRETNKNLDTIVAMIKDYLKTSKTKVLW 138 (438)
T ss_dssp HHHHTCSEEEEEHHHHSCCCSSHHHHHHHHHHHHHHHHHHHTTCSCEEEE
T ss_pred HHHcCCCEEEeccccccccccchhhhhccHHHHHHHHHHHHHHhCCceEe
Confidence 3367888887643222122122 12345666777788888765
No 316
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=29.22 E-value=2.5e+02 Score=24.25 Aligned_cols=97 Identities=5% Similarity=0.014 Sum_probs=49.7
Q ss_pred hhHHHHHHHHHHhCCCeEEEEEecCCC---CcCCHHHHHHH---HHHHHH-cCCcEEEEcCCchhhHHHHHHHHHcCCCC
Q 020079 183 VVSDEMEVMVKEKGINSFKFFMAYKGS---FMINDELLIEG---FKRCKS-LGALAMVHAENGDAVFEGQKRMIELGITG 255 (331)
Q Consensus 183 ~~~~~~~~~~~~~g~~~ik~~~~~~~~---~~~~~~~l~~~---~~~A~~-~g~~v~~H~e~~~~~~~~~~~~~~~G~~~ 255 (331)
...+..+++. +.|++.|.+......+ ....+|+++++ ++..++ .++++.+=....+..+.. .+.|..-
T Consensus 34 ~a~~~a~~~v-~~GAdIIDIGgeSTrPGa~~v~~~eE~~Rv~pvI~~l~~~~~vpiSIDT~~~~Va~aA----l~aGa~i 108 (314)
T 2vef_A 34 QALQQARKLI-AEGASMLDIGGESTRPGSSYVEIEEEIQRVVPVIKAIRKESDVLISIDTWKSQVAEAA----LAAGADL 108 (314)
T ss_dssp HHHHHHHHHH-HTTCSEEEEECCC-----CHHHHHHHHHHHHHHHHHHHHHCCCEEEEECSCHHHHHHH----HHTTCCE
T ss_pred HHHHHHHHHH-HCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhhCCceEEEeCCCHHHHHHH----HHcCCCE
Confidence 3445555666 6899888765321111 11113555544 333443 488888877666555443 3335422
Q ss_pred cccccccCChHHHHHHHHHHHHHHHhcCCCEEEEeC
Q 020079 256 PEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHV 291 (331)
Q Consensus 256 ~~~~~~~~~~~~e~~~i~~~~~l~~~~g~~~~i~H~ 291 (331)
-....... .-.+.+.+++++|+++.+.|.
T Consensus 109 INDVsg~~-------~d~~m~~v~a~~~~~vvlmh~ 137 (314)
T 2vef_A 109 VNDITGLM-------GDEKMPHVVAEARAQVVIMFN 137 (314)
T ss_dssp EEETTTTC-------SCTTHHHHHHHHTCEEEEECC
T ss_pred EEECCCCC-------CChHHHHHHHHcCCCEEEEec
Confidence 11100000 001345677888999999986
No 317
>3ayv_A Putative uncharacterized protein TTHB071; structural genomics, riken structural genomics/proteomics in RSGI, TIM barrel, unknown function; 1.85A {Thermus thermophilus} PDB: 3ayt_A
Probab=29.17 E-value=1.2e+02 Score=24.68 Aligned_cols=21 Identities=33% Similarity=0.515 Sum_probs=15.1
Q ss_pred HHHHHHHHHHHHcCCcE-EEEc
Q 020079 215 ELLIEGFKRCKSLGALA-MVHA 235 (331)
Q Consensus 215 ~~l~~~~~~A~~~g~~v-~~H~ 235 (331)
+.+++.++.|++.|.+. .+|.
T Consensus 76 ~~~~~~i~~A~~lGa~~v~~~~ 97 (254)
T 3ayv_A 76 RRLLFGLDRAAELGADRAVFHS 97 (254)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHHHHhCCCEEEECC
Confidence 45677888888888764 4674
No 318
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=29.09 E-value=2.9e+02 Score=25.98 Aligned_cols=100 Identities=5% Similarity=-0.055 Sum_probs=56.5
Q ss_pred hHHHHHHHHHhCCceEEe-cCcCCCCCcHHHHHHHHHHHhccceeeccccccccCCChhhHHHHHHHHHHhCCCeEEEEE
Q 020079 126 DFFSGQAAALAGGTTMHI-DFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFM 204 (331)
Q Consensus 126 ~~~~~~~~~l~~GvTtv~-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~ 204 (331)
+.......++.+|+-.++ |..........+.++..++..+...+- .+... ..+..+.++ +.|++.+|+.+
T Consensus 281 d~~eR~~aLv~AGvD~iviD~ahGhs~~v~~~i~~ik~~~p~~~vi----aGNVa----T~e~a~~Li-~aGAD~vkVGi 351 (556)
T 4af0_A 281 GDKDRLKLLAEAGLDVVVLDSSQGNSVYQIEFIKWIKQTYPKIDVI----AGNVV----TREQAAQLI-AAGADGLRIGM 351 (556)
T ss_dssp HHHHHHHHHHHTTCCEEEECCSCCCSHHHHHHHHHHHHHCTTSEEE----EEEEC----SHHHHHHHH-HHTCSEEEECS
T ss_pred cHHHHHHHHHhcCCcEEEEeccccccHHHHHHHHHHHhhCCcceEE----ecccc----CHHHHHHHH-HcCCCEEeecC
Confidence 334446677889998765 543322224445555555444332211 11111 123445566 78999999988
Q ss_pred ecCCCCc---------CCHHHHHHHHHHHHHcCCcEEEE
Q 020079 205 AYKGSFM---------INDELLIEGFKRCKSLGALAMVH 234 (331)
Q Consensus 205 ~~~~~~~---------~~~~~l~~~~~~A~~~g~~v~~H 234 (331)
++..... .....+..+.+.|+++++|+..-
T Consensus 352 GpGSiCtTr~v~GvG~PQ~tAi~~~a~~a~~~~vpvIAD 390 (556)
T 4af0_A 352 GSGSICITQEVMAVGRPQGTAVYAVAEFASRFGIPCIAD 390 (556)
T ss_dssp SCSTTBCCTTTCCSCCCHHHHHHHHHHHHGGGTCCEEEE
T ss_pred CCCcccccccccCCCCcHHHHHHHHHHHHHHcCCCEEec
Confidence 7753221 12344566778888999998765
No 319
>4acy_A Endo-alpha-mannosidase; hydrolase, endomannosidase, glycoside hydrolase, CAZY, enzyme-carbohydrate interaction, mannose; HET: MSE; 1.69A {Bacteroides thetaiotaomicron} PDB: 4acz_A 4ad0_A* 4acz_B
Probab=29.09 E-value=98 Score=27.72 Aligned_cols=45 Identities=11% Similarity=0.048 Sum_probs=31.4
Q ss_pred HHHHHhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEcC
Q 020079 190 VMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAE 236 (331)
Q Consensus 190 ~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e 236 (331)
++++++|++++-+-..+.+ ...++.+..+++.|++.|+.+..|.+
T Consensus 110 ~~ak~aGIDgfal~w~~~~--~~~d~~l~~~~~aA~~~g~k~~f~~~ 154 (382)
T 4acy_A 110 RMHIKANVGVLSVTWWGES--DYGNQSVSLLLDEAAKVGAKVCFHIE 154 (382)
T ss_dssp HHHHHHTEEEEEEEECGGG--GTTCHHHHHHHHHHHHHTCEEEEEEC
T ss_pred HHHHHcCCCEEEEEecCCC--CchHHHHHHHHHHHHHcCCEEEEEee
Confidence 4444789988755332211 22357889999999999999998864
No 320
>3ktc_A Xylose isomerase; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.54A {Pectobacterium atrosepticum SCRI1043}
Probab=28.96 E-value=2.7e+02 Score=23.71 Aligned_cols=43 Identities=16% Similarity=0.100 Sum_probs=27.8
Q ss_pred HHHHHHHHHh-CCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEE
Q 020079 186 DEMEVMVKEK-GINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVH 234 (331)
Q Consensus 186 ~~~~~~~~~~-g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H 234 (331)
+.++.+. +. |.+++.+...+.. .+..+++.+.++++|+.+..+
T Consensus 37 e~l~~aa-~~~G~~~VEl~~~~~~-----~~~~~~l~~~l~~~Gl~i~~~ 80 (333)
T 3ktc_A 37 DQINAAK-EVGELSYVDLPYPFTP-----GVTLSEVKDALKDAGLKAIGI 80 (333)
T ss_dssp HHHHHHH-HHSSEEEEEEEESCST-----TCCHHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHH-HhCCCCEEEecCCCcc-----hhHHHHHHHHHHHcCCeEEEE
Confidence 4444444 67 9888877532221 345667777788899998765
No 321
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=28.89 E-value=2.6e+02 Score=23.49 Aligned_cols=117 Identities=12% Similarity=0.047 Sum_probs=62.6
Q ss_pred HHHHHHHHHhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcE-EEEcCCchhhHHHHHHHHHcCCCCccc----cc
Q 020079 186 DEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALA-MVHAENGDAVFEGQKRMIELGITGPEG----HA 260 (331)
Q Consensus 186 ~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v-~~H~e~~~~~~~~~~~~~~~G~~~~~~----~~ 260 (331)
+.++.+. +.|.+.+.++......+ .....+++.+.++++|+.+ .+|....... ...+.. ..
T Consensus 33 ~~l~~~a-~~G~~~VEl~~~~~~~~--~~~~~~~~~~~l~~~GL~v~~~~~~~~~~~-----------~~~p~~~~~~~~ 98 (303)
T 3l23_A 33 ANLRKVK-DMGYSKLELAGYGKGAI--GGVPMMDFKKMAEDAGLKIISSHVNPVDTS-----------ISDPFKAMIFKY 98 (303)
T ss_dssp HHHHHHH-HTTCCEEEECCEETTEE--TTEEHHHHHHHHHHTTCEEEEEECCCBCTT-----------CSSTTTTBCCSC
T ss_pred HHHHHHH-HcCCCEEEeccccCccc--CCCCHHHHHHHHHHcCCeEEEEeccccccc-----------ccCccccccccc
Confidence 3344444 78999998754221101 1123456667778899987 5675321000 000000 00
Q ss_pred ccCChHHHHHHHHHHHHHHHhcCCCEEEEeCCC----H-------HHH-HHHHHHHHcCCC--EEEecCC
Q 020079 261 LSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMS----M-------DAM-EEIAKARKAGPN--FLNTTIP 316 (331)
Q Consensus 261 ~~~~~~~e~~~i~~~~~l~~~~g~~~~i~H~~~----~-------~~~-~~i~~~~~~Gi~--v~~~~~p 316 (331)
...........+++.+++++..|++..+.|... . +.+ +..+.+++.|+. +..+..+
T Consensus 99 ~~~~~~~~~~~~~~~i~~A~~lG~~~v~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~~~l~~En~~ 168 (303)
T 3l23_A 99 SKEVTPKIMEYWKATAADHAKLGCKYLIQPMMPTITTHDEAKLVCDIFNQASDVIKAEGIATGFGYHNHN 168 (303)
T ss_dssp CTTTHHHHHHHHHHHHHHHHHTTCSEEEECSCCCCCSHHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCS
T ss_pred chhhHHHHHHHHHHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcceEEEccCc
Confidence 000001123567889999999999988877431 1 122 234567889999 9876443
No 322
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=28.87 E-value=2.6e+02 Score=23.53 Aligned_cols=105 Identities=10% Similarity=0.025 Sum_probs=54.6
Q ss_pred CChhhHHHHHHHHHhCCceEEecCcCCCCC---cHHHH---HHHHHHHhccceeeccccccccC-CChhhHHHHHHHHHH
Q 020079 122 ETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTAG---FEAYEKKAKNSCMDYGFHMAITK-WDEVVSDEMEVMVKE 194 (331)
Q Consensus 122 ~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 194 (331)
.+.+.+....+..+.+||..++-.++.+.. +..+. ++...+.... + ..+... ...+..+..+... +
T Consensus 16 iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g----v--i~Gvg~~~t~~ai~la~~A~-~ 88 (286)
T 2r91_A 16 LDPELFANHVKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSAARR----V--IVQVASLNADEAIALAKYAE-S 88 (286)
T ss_dssp ECHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHCSS----E--EEECCCSSHHHHHHHHHHHH-H
T ss_pred cCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC----E--EEeeCCCCHHHHHHHHHHHH-h
Confidence 455666666777889999988755543322 22222 2333322222 1 112222 2233444444333 6
Q ss_pred hCCCeEEEEEecCCCCc-CCHHHHHHH-HHHHHHcCCcEEEEc
Q 020079 195 KGINSFKFFMAYKGSFM-INDELLIEG-FKRCKSLGALAMVHA 235 (331)
Q Consensus 195 ~g~~~ik~~~~~~~~~~-~~~~~l~~~-~~~A~~~g~~v~~H~ 235 (331)
.|++++-+.. | .-.. .+++.+.+- -+.|...++|+.++.
T Consensus 89 ~Gadavlv~~-P-~y~~~~s~~~l~~~f~~va~a~~lPiilYn 129 (286)
T 2r91_A 89 RGAEAVASLP-P-YYFPRLSERQIAKYFRDLCSAVSIPVFLYN 129 (286)
T ss_dssp TTCSEEEECC-S-CSSTTCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred cCCCEEEEcC-C-cCCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 8999875432 2 1112 356665544 455667789998873
No 323
>2qw5_A Xylose isomerase-like TIM barrel; putative sugar phosphate isomerase/epimerase; 1.78A {Anabaena variabilis atcc 29413}
Probab=28.47 E-value=2.7e+02 Score=23.61 Aligned_cols=52 Identities=12% Similarity=-0.007 Sum_probs=31.1
Q ss_pred hhHHHHHHHHHHhCCC---eEEE-EEecC-CCCcCC-------HHHHHHHHHHHHHcCCcEEEE
Q 020079 183 VVSDEMEVMVKEKGIN---SFKF-FMAYK-GSFMIN-------DELLIEGFKRCKSLGALAMVH 234 (331)
Q Consensus 183 ~~~~~~~~~~~~~g~~---~ik~-~~~~~-~~~~~~-------~~~l~~~~~~A~~~g~~v~~H 234 (331)
...++++++.++.|.. .... ...+. .....+ .+.+++.++.|++.|.+..+|
T Consensus 65 ~~~~~l~~~l~~~gL~~~~i~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~A~~lG~~~v~~ 128 (335)
T 2qw5_A 65 ENYTNLRHYLDSEGLENVKISTNVGATRTFDPSSNYPEQRQEALEYLKSRVDITAALGGEIMMG 128 (335)
T ss_dssp HHHHHHHHHHHHTTCTTCEEEEECCCCSSSCTTCSSHHHHHHHHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHHCCCCcceeEEEeccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEec
Confidence 3456677777677876 3321 01110 001112 256889999999999998877
No 324
>2lci_A Protein OR36; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=28.43 E-value=1.5e+02 Score=20.50 Aligned_cols=69 Identities=16% Similarity=0.227 Sum_probs=44.8
Q ss_pred cCCChhhHHHHHHHHHHhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEcC--CchhhHHHHHHHHHcCC
Q 020079 178 TKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAE--NGDAVFEGQKRMIELGI 253 (331)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e--~~~~~~~~~~~~~~~G~ 253 (331)
....++..+++..++++.....+-+.. -+...++++++...+.|..+..-.. +..+.++..+..+..|.
T Consensus 32 vndsdelkkemkklaeeknfekiliis-------ndkqllkemlelisklgykvflllqdqdeneleefkrkiesqgy 102 (134)
T 2lci_A 32 VNDSDELKKEMKKLAEEKNFEKILIIS-------NDKQLLKEMLELISKLGYKVFLLLQDQDENELEEFKRKIESQGY 102 (134)
T ss_dssp ECSHHHHHHHHHHHHHCCSCCCEEEEE-------SCHHHHHHHHHHHHHHTCCEEEEEECSCHHHHHHHHHHHHTTTC
T ss_pred cCchHHHHHHHHHHHhhcCcceEEEEc-------CcHHHHHHHHHHHHHhCceeEEEeecCchhHHHHHHHHHHhCCe
Confidence 334456678888888555555443322 3678999999999999999887753 34445555555554443
No 325
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=28.01 E-value=2.7e+02 Score=23.32 Aligned_cols=51 Identities=8% Similarity=-0.028 Sum_probs=31.2
Q ss_pred hhHHHHHHHHHHhCCCeEEEEEec--CC-CCcCC-------HHHHHHHHHHHHHcCCcEEEE
Q 020079 183 VVSDEMEVMVKEKGINSFKFFMAY--KG-SFMIN-------DELLIEGFKRCKSLGALAMVH 234 (331)
Q Consensus 183 ~~~~~~~~~~~~~g~~~ik~~~~~--~~-~~~~~-------~~~l~~~~~~A~~~g~~v~~H 234 (331)
...++++++.++.|..... .... .. ....+ .+.+++.++.|++.|.+..++
T Consensus 66 ~~~~~l~~~l~~~gl~i~~-~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~A~~lG~~~v~~ 126 (309)
T 2hk0_A 66 AELATIRKSAKDNGIILTA-GIGPSKTKNLSSEDAAVRAAGKAFFERTLSNVAKLDIHTIGG 126 (309)
T ss_dssp HHHHHHHHHHHHTTCEEEE-ECCCCSSSCSSCSCHHHHHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred hhHHHHHHHHHHcCCeEEE-ecCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEe
Confidence 4566777777677765433 2111 01 11112 256889999999999997775
No 326
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=27.75 E-value=2.4e+02 Score=22.70 Aligned_cols=47 Identities=17% Similarity=0.099 Sum_probs=24.6
Q ss_pred HHHHHHHHHHhCCCeEEEEEe-cCC--CCcCCHHHHHHHHHHHHHcCCcEEEEc
Q 020079 185 SDEMEVMVKEKGINSFKFFMA-YKG--SFMINDELLIEGFKRCKSLGALAMVHA 235 (331)
Q Consensus 185 ~~~~~~~~~~~g~~~ik~~~~-~~~--~~~~~~~~l~~~~~~A~~~g~~v~~H~ 235 (331)
.++++.+. +.|++.+.+-.- .+. ......+.++++.+. .+.++.+|.
T Consensus 22 ~~~i~~~~-~~Gad~i~l~i~Dg~fv~~~~~~~~~~~~lr~~---~~~~~~v~l 71 (228)
T 1h1y_A 22 AAEADRMV-RLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKH---TKAYLDCHL 71 (228)
T ss_dssp HHHHHHHH-HTTCSEEEEEEEBSSSSSCBCBCHHHHHHHHTT---CCSEEEEEE
T ss_pred HHHHHHHH-HcCCCEEEEEEecCCcCcchhhCHHHHHHHHhh---cCCcEEEEE
Confidence 44555554 678988755432 221 112335555554332 256888884
No 327
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=27.70 E-value=2.3e+02 Score=22.63 Aligned_cols=28 Identities=21% Similarity=0.183 Sum_probs=17.5
Q ss_pred HHHHHHHHHcCCCEEEecCCccccchhh
Q 020079 297 MEEIAKARKAGPNFLNTTIPLCDSCSNI 324 (331)
Q Consensus 297 ~~~i~~~~~~Gi~v~~~~~p~~~~~~~~ 324 (331)
.+..++++++|+.|...+-+.+..-..+
T Consensus 88 ~e~~~~L~~~G~~V~t~tH~lsgveR~i 115 (201)
T 1vp8_A 88 PEVEEELRKRGAKIVRQSHILSGLERSI 115 (201)
T ss_dssp HHHHHHHHHTTCEEEECCCTTTTTHHHH
T ss_pred HHHHHHHHhCCCEEEEEeccccchhHHH
Confidence 3567777778888876666554443333
No 328
>1gve_A Aflatoxin B1 aldehyde reductase member 3; oxidoreductase, aldo-keto reductase, succinic semialdehyde oxidoreductase, AKR7 family; HET: NAP CIT; 1.38A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2clp_A* 2c91_A*
Probab=27.69 E-value=2.9e+02 Score=23.61 Aligned_cols=112 Identities=12% Similarity=-0.034 Sum_probs=50.6
Q ss_pred ChhhHHHHHHHHHhCCceEEecCcCCCCCcHHHHHHHHHHH-h--cc-ceeeccccccc--cCCChhhHHHHHHHHHHhC
Q 020079 123 TIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKK-A--KN-SCMDYGFHMAI--TKWDEVVSDEMEVMVKEKG 196 (331)
Q Consensus 123 ~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~-~--~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g 196 (331)
..++.....+.++..|++.+=....++.+...+.+-..... + ++ ..+.--+.... ....+...+.+++-.++-|
T Consensus 20 ~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~~~r~~~~i~TK~~~~~~~~~~~~~i~~~~~~SL~rL~ 99 (327)
T 1gve_A 20 DVTSSSASVRAFLQRGHTEIDTAFVYANGQSETILGDLGLGLGRSGCKVKIATKAAPMFGKTLKPADVRFQLETSLKRLQ 99 (327)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECCTTGGGGHHHHHHTTSCCCTTSTTCCSEEEEEECSCTTCCSSHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHcCCCEEEchhhcCCCchHHHHHHHHhhcCCCCCeEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHC
Confidence 45566677888999999876322222222222222221110 0 11 11110010000 0112334555555555678
Q ss_pred CCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEE
Q 020079 197 INSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVH 234 (331)
Q Consensus 197 ~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H 234 (331)
.+.+.+++--......+.++..+.++..++.|+.-.+=
T Consensus 100 ~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iG 137 (327)
T 1gve_A 100 CPRVDLFYLHFPDHGTPIEETLQACHQLHQEGKFVELG 137 (327)
T ss_dssp CSCEEEEEECSCCTTSCHHHHHHHHHHHHHTTSEEEEE
T ss_pred CCeEeEEEecCCCCCCCHHHHHHHHHHHHhCCceeEEE
Confidence 88887664211111223445555666667777654433
No 329
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=27.68 E-value=3.3e+02 Score=24.27 Aligned_cols=118 Identities=8% Similarity=-0.011 Sum_probs=65.9
Q ss_pred hhHHHHHHHHHHhCCCeEEEEE-ecCC----CCcCCHHHHHHHHHHHHHcCCcEEEEcCCchhhHHHHHHHHHcCCCCcc
Q 020079 183 VVSDEMEVMVKEKGINSFKFFM-AYKG----SFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPE 257 (331)
Q Consensus 183 ~~~~~~~~~~~~~g~~~ik~~~-~~~~----~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~~~G~~~~~ 257 (331)
+...++.+.+++.|++.++... .+.. -...+.+.++.+.+.+++.|+++..=..+...++... +. +....
T Consensus 156 e~a~~~a~~~k~aGa~~vk~q~fkprts~~~f~gl~~egl~~L~~~~~~~Gl~~~te~~d~~~~~~l~----~~-vd~lk 230 (385)
T 3nvt_A 156 EQVAAVAESIKAKGLKLIRGGAFKPRTSPYDFQGLGLEGLKILKRVSDEYGLGVISEIVTPADIEVAL----DY-VDVIQ 230 (385)
T ss_dssp HHHHHHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHHTCEEEEECCSGGGHHHHT----TT-CSEEE
T ss_pred HHHHHHHHHHHHcCCCeEEcccccCCCChHhhcCCCHHHHHHHHHHHHHcCCEEEEecCCHHHHHHHH----hh-CCEEE
Confidence 3344444444478998886432 1111 1124678999999999999999988776666554332 11 11000
Q ss_pred cccccCChHHHHHHHHHHHHHHHhcCCCEEEEeCC--C-HHHHHHHHHHHHcCC-CEEE
Q 020079 258 GHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVM--S-MDAMEEIAKARKAGP-NFLN 312 (331)
Q Consensus 258 ~~~~~~~~~~e~~~i~~~~~l~~~~g~~~~i~H~~--~-~~~~~~i~~~~~~Gi-~v~~ 312 (331)
.+..... -...++.+...|.++.+.-.. + .+-...+..+++.|- +|..
T Consensus 231 -Igs~~~~------n~~LL~~~a~~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~L 282 (385)
T 3nvt_A 231 -IGARNMQ------NFELLKAAGRVDKPILLKRGLSATIEEFIGAAEYIMSQGNGKIIL 282 (385)
T ss_dssp -ECGGGTT------CHHHHHHHHTSSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEE
T ss_pred -ECccccc------CHHHHHHHHccCCcEEEecCCCCCHHHHHHHHHHHHHcCCCeEEE
Confidence 0000000 123456677889998887654 2 233345566677775 4654
No 330
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=27.60 E-value=3e+02 Score=23.84 Aligned_cols=176 Identities=9% Similarity=-0.090 Sum_probs=92.6
Q ss_pred CChhhHHHHHH-HHHhCCceEEecCcCCCC-CcHHHHHHHHHHHhc---c-ceeeccccccccCCChhhHHHHHHHHHHh
Q 020079 122 ETIDDFFSGQA-AALAGGTTMHIDFVIPIN-GSLTAGFEAYEKKAK---N-SCMDYGFHMAITKWDEVVSDEMEVMVKEK 195 (331)
Q Consensus 122 ~~~~~~~~~~~-~~l~~GvTtv~d~~~~~~-~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (331)
.+.++...-.+ .+.+.|+..+- .+.+.. ....+.+....+... . ....+..... + .+.++.+. +.
T Consensus 38 ~~~~~k~~i~~~~L~~~Gv~~IE-~g~~~~~~~~~~~v~~~~~~~~~~~~~~~~~i~~l~~----~---~~~i~~a~-~~ 108 (337)
T 3ble_A 38 FSTSEKLNIAKFLLQKLNVDRVE-IASARVSKGELETVQKIMEWAATEQLTERIEILGFVD----G---NKTVDWIK-DS 108 (337)
T ss_dssp CCHHHHHHHHHHHHHTTCCSEEE-EEETTSCTTHHHHHHHHHHHHHHTTCGGGEEEEEESS----T---THHHHHHH-HH
T ss_pred cCHHHHHHHHHHHHHHcCCCEEE-EeCCCCChhHHHHHHHHHhhhhhhccCCCCeEEEEcc----c---hhhHHHHH-HC
Confidence 45566656677 77889998765 333332 234455555544311 0 0011111111 1 12566666 68
Q ss_pred CCCeEEEEEecCCC-----CcCC----HHHHHHHHHHHHHcCCcEEEEcCC--------chhhHHHHHHHHHcCCCCcc-
Q 020079 196 GINSFKFFMAYKGS-----FMIN----DELLIEGFKRCKSLGALAMVHAEN--------GDAVFEGQKRMIELGITGPE- 257 (331)
Q Consensus 196 g~~~ik~~~~~~~~-----~~~~----~~~l~~~~~~A~~~g~~v~~H~e~--------~~~~~~~~~~~~~~G~~~~~- 257 (331)
|++.+.++...... ...+ .+.+...++.|+++|+.+.+.+++ .+...+..+.+.+.|...-.
T Consensus 109 g~~~v~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l 188 (337)
T 3ble_A 109 GAKVLNLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLKINVYLEDWSNGFRNSPDYVKSLVEHLSKEHIERIFL 188 (337)
T ss_dssp TCCEEEEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCEEEEEEETHHHHHHHCHHHHHHHHHHHHTSCCSEEEE
T ss_pred CCCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCcCCHHHHHHHHHHHHHcCCCEEEE
Confidence 99998887643210 0112 246677889999999999988766 22233334556677763211
Q ss_pred --cccccCChHHHHHHHHHHHHHH-Hhc-CCCEEE-EeCCCHHHHHHHHHHHHcCCCEE
Q 020079 258 --GHALSRPPLLEGEATTRAIRLA-EFV-NTPLYV-VHVMSMDAMEEIAKARKAGPNFL 311 (331)
Q Consensus 258 --~~~~~~~~~~e~~~i~~~~~l~-~~~-g~~~~i-~H~~~~~~~~~i~~~~~~Gi~v~ 311 (331)
..+...| ..+.+.++.+ +.. +.++.+ +|.+.+-+++-.-.+-++|+...
T Consensus 189 ~DT~G~~~P-----~~v~~lv~~l~~~~p~~~i~~H~Hnd~GlA~AN~laAv~aGa~~v 242 (337)
T 3ble_A 189 PDTLGVLSP-----EETFQGVDSLIQKYPDIHFEFHGHNDYDLSVANSLQAIRAGVKGL 242 (337)
T ss_dssp ECTTCCCCH-----HHHHHHHHHHHHHCTTSCEEEECBCTTSCHHHHHHHHHHTTCSEE
T ss_pred ecCCCCcCH-----HHHHHHHHHHHHhcCCCeEEEEecCCcchHHHHHHHHHHhCCCEE
Confidence 1111223 2233333333 233 556544 36666666666667777898753
No 331
>1wdd_A Ribulose bisphosphate carboxylase large chain; rubisco, photosynthesis, alpha/beta barrel, N-methylmethioni translational modification, lyase; HET: KCX CAP; 1.35A {Oryza sativa} SCOP: c.1.14.1 d.58.9.1 PDB: 3axk_A* 3axm_A* 1rlc_L* 4rub_A* 3rub_L 1ej7_L 1aa1_L* 1aus_L 1rbo_L* 1rco_L* 1rcx_L* 1rxo_L* 1gk8_A* 1ir2_A* 1uzd_A* 1uzh_A* 2v69_A* 1uwa_A* 2v63_A* 2v67_A* ...
Probab=27.56 E-value=3.7e+02 Score=24.80 Aligned_cols=109 Identities=14% Similarity=0.045 Sum_probs=58.4
Q ss_pred CChhhHHHHHHHHHhCCceEEecCcCCCCC---cHHHHHHHHHH----HhccceeeccccccccCC-ChhhHHHHHHHHH
Q 020079 122 ETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTAGFEAYEK----KAKNSCMDYGFHMAITKW-DEVVSDEMEVMVK 193 (331)
Q Consensus 122 ~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 193 (331)
++++.+.......+.+|+--+-|-....+. ...+.+....+ +.....-.-.+...++.. .++..+..+-..
T Consensus 180 Ls~~~~a~~~ye~~~GGlDfiKDDE~l~~qpf~p~~eR~~~v~eai~rA~~eTGe~k~~~~NiTa~~~~eM~~Ra~~a~- 258 (477)
T 1wdd_A 180 LSAKNYGRACYECLRGGLDFTKDDENVNSQPFMRWRDRFVFCAEAIYKSQAETGEIKGHYLNATAGTCEEMIKRAVFAR- 258 (477)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEECCTTCSSBTTBCHHHHHHHHHHHHHHHHHHHSSCCEEEEECCCSSHHHHHHHHHHHH-
T ss_pred CCHHHHHHHHHHHHhcCCceeeCCccCCCCCCCcHHHHHHHHHHHHHHHHHhhCCcceeecCcCCCCHHHHHHHHHHHH-
Confidence 577888888888899998877765443322 33443332222 211111111112223333 333344443333
Q ss_pred HhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEcC
Q 020079 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAE 236 (331)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e 236 (331)
+.|...+- +++ .......+..+.+.|+..++++|.|-.
T Consensus 259 e~G~~~~m--vd~---~~~G~~a~~~l~~~~r~~~l~lh~HRA 296 (477)
T 1wdd_A 259 ELGVPIVM--HDY---LTGGFTANTSLAHYCRDNGLLLHIHRA 296 (477)
T ss_dssp HHTCSEEE--EEH---HHHCHHHHHHHHHHHHHHTCEEEEECT
T ss_pred HhCCCeEE--Eec---cccCcHHHHHHHHhhccCCeEEEecCC
Confidence 56776542 221 112345677788888888999999943
No 332
>3rys_A Adenosine deaminase 1; SGX, hydrolase; HET: ADE; 2.60A {Arthrobacter aurescens} SCOP: c.1.9.0
Probab=27.51 E-value=1.3e+02 Score=26.44 Aligned_cols=40 Identities=8% Similarity=0.068 Sum_probs=28.5
Q ss_pred cCCCEEEEeCCCHH-HHHHHHHHHHcCCCEEEecCCccccchhh
Q 020079 282 VNTPLYVVHVMSMD-AMEEIAKARKAGPNFLNTTIPLCDSCSNI 324 (331)
Q Consensus 282 ~g~~~~i~H~~~~~-~~~~i~~~~~~Gi~v~~~~~p~~~~~~~~ 324 (331)
.|.. .+.|+.... .-+.++.++++|+.+. +||.+|..++.
T Consensus 216 lg~~-rIgHgv~l~~d~~l~~~l~~~~i~le--~cP~SN~~l~~ 256 (343)
T 3rys_A 216 LHVE-RIDHGIRCMEDTDVVQRLVAEQVPLT--VCPLSNVRLRA 256 (343)
T ss_dssp SCCS-EEEECGGGGGCHHHHHHHHHHTCCEE--ECHHHHHHTTS
T ss_pred CCcc-eeeeeeeecCChHHHHHHHhcCCCee--EchhHHHHhCC
Confidence 4544 378876543 2468999999998776 78988877654
No 333
>1njh_A Protein YOJF; structural genomics, PSI, protein structure initiative center for structural genomics, MCSG, unknown function; 1.70A {Bacillus subtilis} SCOP: b.128.1.1
Probab=27.41 E-value=1.6e+02 Score=21.26 Aligned_cols=48 Identities=17% Similarity=0.295 Sum_probs=27.4
Q ss_pred EEEECcEE------EeCCCceeeeEEEeCCEEEEeeCCCCCCCCceEEeCCCCeeecccc
Q 020079 55 ILIKGGTV------VNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGI 108 (331)
Q Consensus 55 ~~i~n~~i------~~~~~~~~~~v~i~~g~I~~ig~~~~~~~~~~~id~~g~~v~PG~I 108 (331)
.-|+|+.| +.+++..+.-+-.++|-|-+=|= ..-.+|-+|+++|-|+=
T Consensus 48 afiRNa~v~ye~~~i~G~gPyRvGLk~~~GWvYaeGL------Th~e~d~~grLLlAGhd 101 (119)
T 1njh_A 48 AYIRNAKVTYHQAKIKGNGPYRVGLKTEEGWIYAEGL------TEYTVDEENRLLMAGHL 101 (119)
T ss_dssp EEEEEEEECEEEEEEESSSSEEEEEEESSSEEEEEEE------CEEEECTTCCEEEEEEE
T ss_pred hEEEeeEEEEEEeEEEcCCCcEEEEEcCCCEEEEccc------eeeEEcCCCcEEEcccC
Confidence 45666665 23444445555555665544332 12467888888888863
No 334
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=27.17 E-value=2.6e+02 Score=22.92 Aligned_cols=52 Identities=13% Similarity=0.159 Sum_probs=30.3
Q ss_pred hhHHHHHHHHHHhCCCeEEEEE-ec-CCCCcCC-------HHHHHHHHHHHHHcCCcEEEE
Q 020079 183 VVSDEMEVMVKEKGINSFKFFM-AY-KGSFMIN-------DELLIEGFKRCKSLGALAMVH 234 (331)
Q Consensus 183 ~~~~~~~~~~~~~g~~~ik~~~-~~-~~~~~~~-------~~~l~~~~~~A~~~g~~v~~H 234 (331)
...++++++.++.|........ .+ ......+ .+.+++.++.|++.|.+..++
T Consensus 47 ~~~~~~~~~l~~~gl~~~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~~lG~~~v~~ 107 (290)
T 2qul_A 47 AKKRELKAVADDLGLTVMCCIGLKSEYDFASPDKSVRDAGTEYVKRLLDDCHLLGAPVFAG 107 (290)
T ss_dssp HHHHHHHHHHHHHTCEEEEEEEECGGGCTTCSCHHHHHHHHHHHHHHHHHHHHHTCSEEEE
T ss_pred hhHHHHHHHHHHcCCceEEecCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEe
Confidence 4456677777667775443211 11 1111112 256889999999999986653
No 335
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=26.85 E-value=5.6e+02 Score=26.65 Aligned_cols=124 Identities=13% Similarity=0.117 Sum_probs=64.2
Q ss_pred HHHHHHHHhCCceEEecCcCCCCC-cHHHHHHHHHHHhccceeeccccc--ccc-C--CChhhHHHHHHHHHHhCCCeEE
Q 020079 128 FSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMDYGFHM--AIT-K--WDEVVSDEMEVMVKEKGINSFK 201 (331)
Q Consensus 128 ~~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~--~~~~~~~~~~~~~~~~g~~~ik 201 (331)
....+.++.+|+..++-+....+- .....++..++.+........+.. ... . .+.+...++.+.+.+.|++.|.
T Consensus 648 ~~~i~~a~~~g~d~irif~sl~~~~~~~~~i~~~~~~g~~v~~~i~~~~~~~d~~r~~~~~~~~~~~~~~~~~~Ga~~i~ 727 (1165)
T 2qf7_A 648 KYFVRQAAKGGIDLFRVFDCLNWVENMRVSMDAIAEENKLCEAAICYTGDILNSARPKYDLKYYTNLAVELEKAGAHIIA 727 (1165)
T ss_dssp HHHHHHHHHHTCCEEEEECTTCCGGGGHHHHHHHHHTTCEEEEEEECCSCTTCTTSGGGCHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHhcCcCEEEEEeeHHHHHHHHHHHHHHHhccceEEEEEEEeccccCCCCCCCCHHHHHHHHHHHHHcCCCEEE
Confidence 345667788898876533222221 555666666666543222222111 110 1 2223333333333368998774
Q ss_pred EEEecCCCCcCCHHHHHHHHHHHHH-cCCcEEEEcCCchhhHHHH-HHHHHcCCC
Q 020079 202 FFMAYKGSFMINDELLIEGFKRCKS-LGALAMVHAENGDAVFEGQ-KRMIELGIT 254 (331)
Q Consensus 202 ~~~~~~~~~~~~~~~l~~~~~~A~~-~g~~v~~H~e~~~~~~~~~-~~~~~~G~~ 254 (331)
+- +..+ ...+..+.++++..++ .++++.+|+.++....-.. ....+.|..
T Consensus 728 l~-DT~G--~~~P~~~~~lv~~l~~~~~~~i~~H~Hnd~GlAvAn~laAv~aGa~ 779 (1165)
T 2qf7_A 728 VK-DMAG--LLKPAAAKVLFKALREATGLPIHFHTHDTSGIAAATVLAAVEAGVD 779 (1165)
T ss_dssp EE-ETTC--CCCHHHHHHHHHHHHHHCSSCEEEEECBTTSCHHHHHHHHHHTTCS
T ss_pred Ee-CccC--CcCHHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHhCCC
Confidence 42 2222 3467777777776644 4899999997765543332 223455553
No 336
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=26.77 E-value=1.6e+02 Score=25.41 Aligned_cols=22 Identities=14% Similarity=0.146 Sum_probs=11.4
Q ss_pred CHHHHHHHHHHHHHcCCcEEEE
Q 020079 213 NDELLIEGFKRCKSLGALAMVH 234 (331)
Q Consensus 213 ~~~~l~~~~~~A~~~g~~v~~H 234 (331)
+.|.++++++.|++.+.|+.+-
T Consensus 26 n~e~~~Ail~AAee~~sPvIlq 47 (305)
T 1rvg_A 26 NMEFLQAVLEAAEEQRSPVILA 47 (305)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEE
T ss_pred CHHHHHHHHHHHHHhCCCEEEE
Confidence 3455555555555555555444
No 337
>2bp1_A Aflatoxin B1 aldehyde reductase member 2; oxidoreductase, aldo-keto reductase family 7, SSA reductase, barrel; HET: FLC NDP; 2.4A {Homo sapiens}
Probab=26.60 E-value=3.2e+02 Score=23.80 Aligned_cols=112 Identities=11% Similarity=-0.021 Sum_probs=51.9
Q ss_pred ChhhHHHHHHHHHhCCceEEecCcCCCCCcHHHHHHHHHHH--h-cc-ceeecccccc-c-cCCChhhHHHHHHHHHHhC
Q 020079 123 TIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKK--A-KN-SCMDYGFHMA-I-TKWDEVVSDEMEVMVKEKG 196 (331)
Q Consensus 123 ~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~--~-~~-~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~g 196 (331)
..++.....+.++..|++.+=....++.+...+.+-..... + ++ ..+.--+... . ....+...+.+++-.++-|
T Consensus 53 ~~~~~~~~l~~Al~~Gin~~DTA~~Yg~G~sE~~lG~al~~~~~~r~~v~I~TK~~~~~~~~~~~~~i~~~~e~SL~rLg 132 (360)
T 2bp1_A 53 DAPASAAAVRAFLERGHTELDTAFMYSDGQSETILGGLGLGLGGGDCRVKIATKANPWDGKSLKPDSVRSQLETSLKRLQ 132 (360)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECCTTGGGGHHHHHHHTSCCCTTSTTCCCEEEEEECCCTTCCSSHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHcCCCEEECccccCCCChHHHHHHHHhhccCCCCeEEEEeeecCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 45666677888999999876322222222223333222110 1 11 1111001000 0 1112334555555555678
Q ss_pred CCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEE
Q 020079 197 INSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVH 234 (331)
Q Consensus 197 ~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H 234 (331)
.+.+.+++--......+.++..+.++..++.|+.-.+-
T Consensus 133 ~dyiDl~~lH~p~~~~~~~e~~~aL~~l~~~Gkir~iG 170 (360)
T 2bp1_A 133 CPQVDLFYLHAPDHGTPVEETLHACQRLHQEGKFVELG 170 (360)
T ss_dssp CSCEEEEEECSCCTTSCHHHHHHHHHHHHHTTSEEEEE
T ss_pred CCeEeEEEecCCCCCCCHHHHHHHHHHHHHCCCccEEE
Confidence 88887664211111223455556666677777654444
No 338
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=26.42 E-value=3.2e+02 Score=23.71 Aligned_cols=116 Identities=7% Similarity=-0.032 Sum_probs=63.4
Q ss_pred HHhCCCeEEEEEecCC--CCcCCHHHHHHHHHHH-HHcCCcEEEE-cCCchhhHHHHHHHHHcCCCCcccccccCChHHH
Q 020079 193 KEKGINSFKFFMAYKG--SFMINDELLIEGFKRC-KSLGALAMVH-AENGDAVFEGQKRMIELGITGPEGHALSRPPLLE 268 (331)
Q Consensus 193 ~~~g~~~ik~~~~~~~--~~~~~~~~l~~~~~~A-~~~g~~v~~H-~e~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~e 268 (331)
++.|++.|.+...... ....+.+++.+.++.. +..++|+.+= |.++..-....+...+.|.......+....
T Consensus 91 ~~~GAdiIDIg~eStrP~~~~vs~ee~~~~V~~v~~~~~vPlsIDg~~~~T~~~eV~eaAleagag~~~lINsv~~---- 166 (323)
T 4djd_D 91 AEYGADLIYLKLDGADPEGANHSVDQCVATVKEVLQAVGVPLVVVGCGDVEKDHEVLEAVAEAAAGENLLLGNAEQ---- 166 (323)
T ss_dssp HTTCCSEEEEECGGGCTTTTCCCHHHHHHHHHHHHHHCCSCEEEECCSCHHHHHHHHHHHHHHTTTSCCEEEEEBT----
T ss_pred HHcCCCEEEEcCccCCCCCCCCCHHHHHHHHHHHHhhCCceEEEECCCCCCCCHHHHHHHHHhcCCCCCeEEECCc----
Confidence 3578888876533211 1234555555555544 4458898887 554444334444444444321111111000
Q ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCHHH-HHHHHHHHHcCC---CEEEe
Q 020079 269 GEATTRAIRLAEFVNTPLYVVHVMSMDA-MEEIAKARKAGP---NFLNT 313 (331)
Q Consensus 269 ~~~i~~~~~l~~~~g~~~~i~H~~~~~~-~~~i~~~~~~Gi---~v~~~ 313 (331)
...++.+.++.++|+++.+.|...-.- .+.++.+.+.|+ +|..|
T Consensus 167 -~~~~~m~~laa~~g~~vVlmh~~d~~~~~~l~~~a~~~GI~~e~IIlD 214 (323)
T 4djd_D 167 -ENYKSLTAACMVHKHNIIARSPLDINICKQLNILINEMNLPLDHIVID 214 (323)
T ss_dssp -TBCHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHHTTTCCGGGEEEE
T ss_pred -ccHHHHHHHHHHhCCeEEEEccchHHHHHHHHHHHHHcCCCHHHEEEe
Confidence 012356678889999999989644322 245667888998 36655
No 339
>3k2g_A Resiniferatoxin-binding, phosphotriesterase- related protein; TIM barrel, binuclear zinc, protein structure initiative II (PSI II); 1.80A {Rhodobacter sphaeroides 2}
Probab=26.18 E-value=3.3e+02 Score=23.87 Aligned_cols=12 Identities=33% Similarity=0.401 Sum_probs=10.0
Q ss_pred ccccccccccCC
Q 020079 106 GGIDPHTHLAME 117 (331)
Q Consensus 106 G~ID~H~H~~~~ 117 (331)
|++.+|=|+...
T Consensus 29 G~tl~HEHl~~~ 40 (364)
T 3k2g_A 29 GHTLMHEHLQND 40 (364)
T ss_dssp CSEESSCCSSEE
T ss_pred CCceeccCeeec
Confidence 889999998754
No 340
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=26.17 E-value=3e+02 Score=23.28 Aligned_cols=110 Identities=7% Similarity=-0.022 Sum_probs=54.9
Q ss_pred CCCChhhHHHHHHHHHhCCceEEecCcCCCCC---cHHHHHHHHHHHhccceeeccccccccC-CChhhHHHHHHHHHHh
Q 020079 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTAGFEAYEKKAKNSCMDYGFHMAITK-WDEVVSDEMEVMVKEK 195 (331)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 195 (331)
+..+.+.+....+..+.+|+..++-.++.+.. +..+..+..+....... .+ ..+... ...+..+..+... +.
T Consensus 15 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~~-gv--iaGvg~~~t~~ai~la~~A~-~~ 90 (293)
T 1w3i_A 15 NRIDKEKLKIHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVTN-KI--IFQVGGLNLDDAIRLAKLSK-DF 90 (293)
T ss_dssp SSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTCS-CE--EEECCCSCHHHHHHHHHHGG-GS
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHcC-CE--EEecCCCCHHHHHHHHHHHH-hc
Confidence 34556667677777889999988755543322 33333222222221110 01 112221 1233333333333 57
Q ss_pred CCCeEEEEEecCCCCc-CCHHHHHH-HHHHHHHcCCcEEEEc
Q 020079 196 GINSFKFFMAYKGSFM-INDELLIE-GFKRCKSLGALAMVHA 235 (331)
Q Consensus 196 g~~~ik~~~~~~~~~~-~~~~~l~~-~~~~A~~~g~~v~~H~ 235 (331)
|++++-+..-+ -.. .+++.+.+ .-+.|...++|+.++.
T Consensus 91 Gadavlv~~P~--y~~~~s~~~l~~~f~~va~a~~lPiilYn 130 (293)
T 1w3i_A 91 DIVGIASYAPY--YYPRMSEKHLVKYFKTLCEVSPHPVYLYN 130 (293)
T ss_dssp CCSEEEEECCC--SCSSCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred CCCEEEEcCCC--CCCCCCHHHHHHHHHHHHhhCCCCEEEEE
Confidence 88887554221 112 35665554 4455677789998873
No 341
>1v6t_A Hypothetical UPF0271 protein PH0986; TIM-barrel, lactam utilization protein, structural genomics; 1.70A {Pyrococcus horikoshii} SCOP: c.6.2.5
Probab=25.94 E-value=2e+02 Score=23.99 Aligned_cols=18 Identities=11% Similarity=0.089 Sum_probs=13.5
Q ss_pred HHHHHHHHcCCCEEEecC
Q 020079 298 EEIAKARKAGPNFLNTTI 315 (331)
Q Consensus 298 ~~i~~~~~~Gi~v~~~~~ 315 (331)
+..+.+++.|+++..+..
T Consensus 148 ~~~~~A~~~Gl~~~~E~F 165 (255)
T 1v6t_A 148 RVADIAEEMGLKVAHEVF 165 (255)
T ss_dssp HHHHHHHHHTCCEEEEEC
T ss_pred HHHHHHHHcCCcEEEEEe
Confidence 467778888998887654
No 342
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=25.92 E-value=2.9e+02 Score=23.04 Aligned_cols=43 Identities=21% Similarity=0.214 Sum_probs=30.9
Q ss_pred HHHHHhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEc
Q 020079 190 VMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA 235 (331)
Q Consensus 190 ~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~ 235 (331)
+.+++.|.+.+.+. .+....+.+...++++.+++.|..+..-.
T Consensus 92 ~~~k~lGf~~iEiS---~G~i~l~~~~~~~~I~~~~~~G~~v~~Ev 134 (251)
T 1qwg_A 92 NECEKLGFEAVEIS---DGSSDISLEERNNAIKRAKDNGFMVLTEV 134 (251)
T ss_dssp HHHHHHTCCEEEEC---CSSSCCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHcCCCEEEEC---CCcccCCHHHHHHHHHHHHHCCCEEeeec
Confidence 33335677666542 34556788999999999999999987764
No 343
>4ad1_A Glycosyl hydrolase family 71; glycoside hydrolase GH99, CAZY, enzyme-carbohydra interaction, mannose glycosidase inhibition; 1.90A {Bacteroides xylanisolvens} PDB: 4ad2_A* 4ad3_A* 4ad4_A* 4ad5_A*
Probab=25.52 E-value=1.4e+02 Score=26.59 Aligned_cols=53 Identities=6% Similarity=-0.131 Sum_probs=34.3
Q ss_pred hhHHHHHHHHHHhCCCeEEEEEecCCCCcCCH-HHHHHHHHHHHHcCCcEEEEcCC
Q 020079 183 VVSDEMEVMVKEKGINSFKFFMAYKGSFMIND-ELLIEGFKRCKSLGALAMVHAEN 237 (331)
Q Consensus 183 ~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~-~~l~~~~~~A~~~g~~v~~H~e~ 237 (331)
+..+.-.++++++|++++-+..-+.+ ...+ ..+..+++.|++.|.++..|.+.
T Consensus 104 ~v~~~h~~~Ak~aGIDgf~l~w~~~~--~~~d~~~l~~~l~aA~~~~~k~~f~~~~ 157 (380)
T 4ad1_A 104 NILTKHMDMFVMARTGVLALTWWNEQ--DETEAKRIGLILDAADKKKIKVCFHLEP 157 (380)
T ss_dssp HHHHHHHHHHHHHTEEEEEEEECCCC--SHHHHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHHHHcCCCEEEEEecCCC--CcccHHHHHHHHHHHHHcCCeEEEEECC
Confidence 33333334555789998865432221 1234 67888999999999999888643
No 344
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=25.30 E-value=1.4e+02 Score=25.88 Aligned_cols=24 Identities=17% Similarity=0.091 Sum_probs=21.4
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEc
Q 020079 212 INDELLIEGFKRCKSLGALAMVHA 235 (331)
Q Consensus 212 ~~~~~l~~~~~~A~~~g~~v~~H~ 235 (331)
.+.+.++++++.|++.+.|+.+-.
T Consensus 35 ~n~e~~~Avl~AAee~~sPvIlq~ 58 (306)
T 3pm6_A 35 YNLEGILAIIRAAEHKRSPAMILL 58 (306)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEc
Confidence 368999999999999999998875
No 345
>2eja_A URO-D, UPD, uroporphyrinogen decarboxylase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 1.90A {Aquifex aeolicus}
Probab=25.22 E-value=2.4e+02 Score=24.31 Aligned_cols=63 Identities=6% Similarity=0.045 Sum_probs=39.0
Q ss_pred HHHHHHHHHhCCCeEEEEEecCCCCcCCHHH--------HHHHHHHHHHc-CCcEEEEcCCchhhHHHHHHHHHcCCC
Q 020079 186 DEMEVMVKEKGINSFKFFMAYKGSFMINDEL--------LIEGFKRCKSL-GALAMVHAENGDAVFEGQKRMIELGIT 254 (331)
Q Consensus 186 ~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~--------l~~~~~~A~~~-g~~v~~H~e~~~~~~~~~~~~~~~G~~ 254 (331)
+.++.+. +.|++.+.++-++.+ ..+++. ++++++..++. |.++..|+.+.. .....+.+.|..
T Consensus 183 ~~~~~~~-~aGad~i~i~d~~~~--~lsp~~f~ef~~p~~k~i~~~i~~~~g~~~i~~~~g~~---~~l~~l~~~g~d 254 (338)
T 2eja_A 183 AYLKEQI-KAGADVVQIFDSWVN--NLSLEDYGEYVYPYVNYLISELKDFSDTPVIYFFRGSS---SFIDLAVDYRAD 254 (338)
T ss_dssp HHHHHHH-HTTCSEEEEEETTGG--GSCHHHHHHHTHHHHHHHHHHHHHHCCCCEEEEESSHH---HHHHHHTTSCCS
T ss_pred HHHHHHH-HhCCCEEEEecCccc--cCCHHHHHHHhHHHHHHHHHHHhhcCCCCEEEEcCCcH---HHHHHHHHcCCC
Confidence 3444444 579998876644332 445544 56788888887 899999975442 233445565653
No 346
>2pgf_A Adenosine deaminase; metallo-dependent hydrolase, structural genomics, medical ST genomics of pathogenic protozoa consortium, MSGPP; HET: MSE ADN; 1.89A {Plasmodium vivax} PDB: 2pgr_A* 2qvn_A* 3ewc_A* 3ewd_A* 2amx_A
Probab=25.13 E-value=3.1e+02 Score=24.11 Aligned_cols=39 Identities=10% Similarity=0.130 Sum_probs=27.8
Q ss_pred cCCCEEEEeCCCHH-HHHHHHHHHHcCCCEEEecCCccccchh
Q 020079 282 VNTPLYVVHVMSMD-AMEEIAKARKAGPNFLNTTIPLCDSCSN 323 (331)
Q Consensus 282 ~g~~~~i~H~~~~~-~~~~i~~~~~~Gi~v~~~~~p~~~~~~~ 323 (331)
.|.. .+.|+.... .-+.++.++++|+.+. +||.+|..++
T Consensus 254 lg~~-ri~Hgv~l~~~~~l~~~l~~~~i~v~--~cP~SN~~l~ 293 (371)
T 2pgf_A 254 LKVE-RIGHGIRVAESQELIDMVKEKNILLE--VCPISNVLLK 293 (371)
T ss_dssp SCCS-EEEECGGGGGCHHHHHHHHHTTCEEE--ECHHHHHHTT
T ss_pred cCCC-EEecchhccccHHHHHHHHHcCCeEE--ECcchhHHhC
Confidence 3665 589987542 2356899999997665 7898877654
No 347
>4dci_A Uncharacterized protein; PSI-biology, midwest center for structural genomics, MCSG, S genomics, unknown function; 2.82A {Synechococcus SP}
Probab=25.12 E-value=51 Score=25.28 Aligned_cols=16 Identities=19% Similarity=0.524 Sum_probs=14.1
Q ss_pred eeeEEEeCCEEEEeeC
Q 020079 70 IADVYVEDGIVVAVQP 85 (331)
Q Consensus 70 ~~~v~i~~g~I~~ig~ 85 (331)
...|+|+||+|.+|..
T Consensus 134 ~~EIvv~DGvV~eIR~ 149 (150)
T 4dci_A 134 QVAIVVRDGVIQSIEE 149 (150)
T ss_dssp CEEEEEETTEEEEEEC
T ss_pred CcEEEEeCCEEEEeeC
Confidence 7899999999999863
No 348
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=24.93 E-value=1.1e+02 Score=26.68 Aligned_cols=47 Identities=13% Similarity=0.177 Sum_probs=33.6
Q ss_pred HHHHHHHhCCCeEEEEEecCCCCcC-----CHHHHHHHHHHHHHcCCcEEEEc
Q 020079 188 MEVMVKEKGINSFKFFMAYKGSFMI-----NDELLIEGFKRCKSLGALAMVHA 235 (331)
Q Consensus 188 ~~~~~~~~g~~~ik~~~~~~~~~~~-----~~~~l~~~~~~A~~~g~~v~~H~ 235 (331)
++++. +.|++.+|+.+.++..... ..+.+.++.+.|++.|+|+....
T Consensus 116 ve~a~-~~GADAVk~lv~~g~d~~~e~~~~q~~~l~rv~~ec~~~GiPlllEi 167 (332)
T 3iv3_A 116 IKRLK-EAGADAVKFLLYYDVDGDPQVNVQKQAYIERIGSECQAEDIPFFLEI 167 (332)
T ss_dssp HHHHH-HTTCSEEEEEEEECTTSCHHHHHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred HHHHH-HcCCCEEEEEEEcCCCchHHHHHHHHHHHHHHHHHHHHcCCceEEEE
Confidence 34445 7899999988776532111 12467889999999999998853
No 349
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=24.92 E-value=96 Score=26.32 Aligned_cols=60 Identities=7% Similarity=0.002 Sum_probs=35.3
Q ss_pred HhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEcC--CchhhHHHHHHHHHcCCCC
Q 020079 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAE--NGDAVFEGQKRMIELGITG 255 (331)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e--~~~~~~~~~~~~~~~G~~~ 255 (331)
+. ++++-+..+.......+.++-+++++.+.+ .+|+.+++. +..+.-+..+...+.|..+
T Consensus 30 ~~-v~gl~v~GttGE~~~Ls~~Er~~v~~~~~~-rvpviaGvg~~~t~~ai~la~~A~~~Gada 91 (283)
T 2pcq_A 30 PL-VDGLLVYGSNGEGVHLTPEERARGLRALRP-RKPFLVGLMEETLPQAEGALLEAKAAGAMA 91 (283)
T ss_dssp GG-SSCCEETCTTTTGGGSCHHHHHHHHHTCCC-SSCCEEEECCSSHHHHHHHHHHHHHHTCSE
T ss_pred hh-CCEEEECCcCcCchhcCHHHHHHHHHHHHh-CCcEEEeCCCCCHHHHHHHHHHHHhcCCCE
Confidence 45 666543222223345678888888887777 778888753 3344434445566667643
No 350
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai}
Probab=24.83 E-value=1.9e+02 Score=24.01 Aligned_cols=46 Identities=15% Similarity=0.226 Sum_probs=30.8
Q ss_pred HHHHHHHHHhCCCeEEEEEecCCCC----------------cCCHHHHHHHHHHHHHcCCcEE
Q 020079 186 DEMEVMVKEKGINSFKFFMAYKGSF----------------MINDELLIEGFKRCKSLGALAM 232 (331)
Q Consensus 186 ~~~~~~~~~~g~~~ik~~~~~~~~~----------------~~~~~~l~~~~~~A~~~g~~v~ 232 (331)
++++.+. +.|.+.+.+++...... ...-+.+..++++|.++|+.+.
T Consensus 46 ~~l~~~k-~~G~N~vRv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~a~~~Gi~vi 107 (351)
T 3vup_A 46 PEFKKLH-DAGGNSMRLWIHIQGETTPAFNDQGFVTGPDKQGTMLDDMKDLLDTAKKYNILVF 107 (351)
T ss_dssp HHHHHHH-HTTCCEEEEEEEETTSSSSEECTTSCEEESCSSSCHHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHH-HcCCcEEEECcccccccCcccccccccccccccHHHHHHHHHHHHHHHHCCCeEE
Confidence 3444444 78999998876432211 1124678899999999999874
No 351
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=24.72 E-value=2.2e+02 Score=24.33 Aligned_cols=24 Identities=21% Similarity=-0.172 Sum_probs=19.0
Q ss_pred CCChhhHHHHHHHHHhCCceEEec
Q 020079 121 SETIDDFFSGQAAALAGGTTMHID 144 (331)
Q Consensus 121 ~~~~~~~~~~~~~~l~~GvTtv~d 144 (331)
..+.+++....+.+..+|+.+|+-
T Consensus 70 ~~T~~dI~~lc~eA~~~g~aaVCV 93 (288)
T 3oa3_A 70 SATGSQIDVLCAEAKEYGFATVCV 93 (288)
T ss_dssp TCCHHHHHHHHHHHHHHTCSEEEE
T ss_pred CCCHHHHHHHHHHHHhcCCcEEEE
Confidence 456788888888888888888873
No 352
>4gie_A Prostaglandin F synthase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: NAP; 1.25A {Trypanosoma cruzi} PDB: 4fzi_A*
Probab=24.33 E-value=3.2e+02 Score=22.96 Aligned_cols=107 Identities=7% Similarity=-0.098 Sum_probs=52.8
Q ss_pred hhhHHHHHHHHHhCCceEEecCcCCCCCcHHHHHHHHHHHh--ccceeecccccc-ccCCChhhHHHHHHHHHHhCCCeE
Q 020079 124 IDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKA--KNSCMDYGFHMA-ITKWDEVVSDEMEVMVKEKGINSF 200 (331)
Q Consensus 124 ~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~i 200 (331)
.++.....+.|+..|++.+=....+++ .+.+-.+.+.. .+..+....... .....+...+.+++-.++-|.+.+
T Consensus 37 ~~e~~~~v~~Al~~Gin~~DTA~~Ygs---E~~vG~~l~~~~~~r~~~~i~tk~~~~~~~~~~~~~~~e~SL~rL~~dyi 113 (290)
T 4gie_A 37 GAETANAVRWAIEAGYRHIDTAYIYSN---ERGVGQGIRESGVPREEVWVTTKVWNSDQGYEKTLAAFERSRELLGLEYI 113 (290)
T ss_dssp THHHHHHHHHHHHHTCCEEECCGGGTC---HHHHHHHHHHHCCCGGGSEEEEEECGGGCSHHHHHHHHHHHHHHHTCSCE
T ss_pred HHHHHHHHHHHHHcCCCEEecccccCC---HHHHHHHHHhcCCcchhccccccccccCCChHHHHHHHHHHHHHhCCCce
Confidence 455666778899999988632222222 23332222221 111111100000 111123344455555556788888
Q ss_pred EEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEE
Q 020079 201 KFFMAYKGSFMINDELLIEGFKRCKSLGALAMVH 234 (331)
Q Consensus 201 k~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H 234 (331)
.++.- |.+...+.++..+.++..++.|+.-.+-
T Consensus 114 Dly~l-H~p~~~~~~e~~~al~~l~~~Gkir~iG 146 (290)
T 4gie_A 114 DLYLI-HWPGKKKFVDTWKALEKLYEEKKVRAIG 146 (290)
T ss_dssp EEEEE-CCCCSSSHHHHHHHHHHHHHTTSEEEEE
T ss_pred eeEEe-cCCCCCcchHHHHHHHHHHHCCCcceee
Confidence 77652 3333345555556677777778755444
No 353
>3e38_A Two-domain protein containing predicted PHP-like dependent phosphoesterase; structural genomics; 2.20A {Bacteroides vulgatus atcc 8482}
Probab=24.23 E-value=47 Score=29.33 Aligned_cols=33 Identities=18% Similarity=-0.017 Sum_probs=24.4
Q ss_pred cccccccccCCCCCCCChhhHHHHHHHHHhCCceEEe
Q 020079 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHI 143 (331)
Q Consensus 107 ~ID~H~H~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~ 143 (331)
++|.|+|...+ -|..+++++ .+.+.+.|+..+.
T Consensus 20 ~~DlH~Ht~~S-Dg~~~~~el---v~~A~~~Gl~~ia 52 (343)
T 3e38_A 20 KCDFHMHSVFS-DGLVWPTVR---VDEAYRDGLDAIS 52 (343)
T ss_dssp EEECCBCCTTT-TCSBCHHHH---HHHHHHTTCSEEC
T ss_pred EEECCCCCCCC-CCCCCHHHH---HHHHHHcCCCEEE
Confidence 79999998766 355566665 6777888988765
No 354
>3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius}
Probab=24.20 E-value=2.7e+02 Score=24.22 Aligned_cols=50 Identities=14% Similarity=0.202 Sum_probs=33.9
Q ss_pred hhHHHHHHHHHHhCCCeEEEEEe--cC---C-------CCcCCHHHHHHHHHHHHHcCCcEEE
Q 020079 183 VVSDEMEVMVKEKGINSFKFFMA--YK---G-------SFMINDELLIEGFKRCKSLGALAMV 233 (331)
Q Consensus 183 ~~~~~~~~~~~~~g~~~ik~~~~--~~---~-------~~~~~~~~l~~~~~~A~~~g~~v~~ 233 (331)
...+.+..+. +.|++.+.+... +. . ..+.+++.+.++++.|++.|+.|.+
T Consensus 54 ~~~~~l~~lk-~~g~N~VrL~v~~~~~~~~~~~~~~~~~~t~~~~~v~~~~~~Ak~~GL~V~l 115 (343)
T 3civ_A 54 EARASMRALA-EQPFNWVTLAFAGLMEHPGDPAIAYGPPVTVSDDEIASMAELAHALGLKVCL 115 (343)
T ss_dssp HHHHHHHHHH-HSSCSEEEEEEEEEESSTTCCCCBCSTTTBCCHHHHHHHHHHHHHTTCEEEE
T ss_pred hHHHHHHHHH-HcCCCEEEEEeeecCCCCCCCcccccCCCCCCHHHHHHHHHHHHHCCCEEEE
Confidence 3445555555 688888765432 21 1 1123789999999999999999976
No 355
>2zvr_A Uncharacterized protein TM_0416; hyperthermophIle, ketohexose 3-epimeras tagatose 3-epimerase, isomerase; 2.20A {Thermotoga maritima}
Probab=24.12 E-value=3e+02 Score=22.65 Aligned_cols=52 Identities=15% Similarity=0.150 Sum_probs=30.4
Q ss_pred hHHHHHHHHHHhCCCeEEEEEe--c---C-CCCcCC-------HHHHHHHHHHHHHcCCcEEEEc
Q 020079 184 VSDEMEVMVKEKGINSFKFFMA--Y---K-GSFMIN-------DELLIEGFKRCKSLGALAMVHA 235 (331)
Q Consensus 184 ~~~~~~~~~~~~g~~~ik~~~~--~---~-~~~~~~-------~~~l~~~~~~A~~~g~~v~~H~ 235 (331)
..++++++.++.|.....+... + . .....+ .+.+++.++.|++.|.+..+|.
T Consensus 69 ~~~~~~~~l~~~gl~~~~~~~~~p~~~~~~~l~~~d~~~r~~~~~~~~~~i~~A~~lG~~~v~~~ 133 (290)
T 2zvr_A 69 DWNEVKILSEELNLPICAIGTGQAYLADGLSLTHPNDEIRKKAIERVVKHTEVAGMFGALVIIGL 133 (290)
T ss_dssp CHHHHHHHHHHHTCCEEEEECTHHHHTTCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTCEEEESG
T ss_pred hHHHHHHHHHHcCCeEEEEeccCccccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEec
Confidence 3556667666677765443320 0 1 111112 2557888888899998887775
No 356
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=23.50 E-value=3.7e+02 Score=23.43 Aligned_cols=108 Identities=7% Similarity=-0.097 Sum_probs=54.4
Q ss_pred CCCChhhHHHHHHHHHhCCceEEecCcCCCCC---cHHHHHHHHHH-HhccceeeccccccccC-CChhhHHHHHHHHHH
Q 020079 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTAGFEAYEK-KAKNSCMDYGFHMAITK-WDEVVSDEMEVMVKE 194 (331)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 194 (331)
+..+.+.+....+..+.+||..++-.+..+.. +..+..+..+. ...+.++- .+... ...+..+..+... +
T Consensus 42 g~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~~~grvpVi----aGvg~~st~eai~la~~A~-~ 116 (344)
T 2hmc_A 42 RTPDFDALVRKGKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVERLVKAGIPVI----VGTGAVNTASAVAHAVHAQ-K 116 (344)
T ss_dssp SSBCHHHHHHHHHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHHHHHTTCCEE----EECCCSSHHHHHHHHHHHH-H
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHHHhCCCCcEE----EecCCCCHHHHHHHHHHHH-h
Confidence 34556667777777889999888755433221 22222222221 12222221 11221 1233444444443 6
Q ss_pred hCCCeEEEEEecCCCCc-CCHHHHHHHH-HHHH-HcCCcEEEE
Q 020079 195 KGINSFKFFMAYKGSFM-INDELLIEGF-KRCK-SLGALAMVH 234 (331)
Q Consensus 195 ~g~~~ik~~~~~~~~~~-~~~~~l~~~~-~~A~-~~g~~v~~H 234 (331)
.|++++-+.. | .-.. .+++.+.+-+ +.|. ..++|+.+.
T Consensus 117 ~Gadavlv~~-P-~y~~~~s~~~l~~~f~~IA~aa~~lPiilY 157 (344)
T 2hmc_A 117 VGAKGLMVIP-R-VLSRGSVIAAQKAHFKAILSAAPEIPAVIY 157 (344)
T ss_dssp HTCSEEEECC-C-CSSSTTCHHHHHHHHHHHHHHSTTSCEEEE
T ss_pred cCCCEEEECC-C-ccCCCCCHHHHHHHHHHHHhhCCCCcEEEE
Confidence 7999875432 1 1112 3566665544 4455 568999887
No 357
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=23.06 E-value=3.3e+02 Score=22.76 Aligned_cols=95 Identities=8% Similarity=0.083 Sum_probs=46.4
Q ss_pred hHHHHHHHHHHhCCCeEEEEEecCCCCcCCHHHH-----------------HHHHHHHHH--cCCcEEEEcC-Cc---hh
Q 020079 184 VSDEMEVMVKEKGINSFKFFMAYKGSFMINDELL-----------------IEGFKRCKS--LGALAMVHAE-NG---DA 240 (331)
Q Consensus 184 ~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l-----------------~~~~~~A~~--~g~~v~~H~e-~~---~~ 240 (331)
..+.++.+. +.|++.+.+.+-+.. +..+-..+ -.+++..++ .++|+++-.. ++ ..
T Consensus 34 ~~~~~~~l~-~~GaD~iElgiPfSD-P~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~~~~Pivlm~Y~npv~~~g 111 (267)
T 3vnd_A 34 SLKIIQTLV-DNGADALELGFPFSD-PLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQHPDMPIGLLLYANLVFANG 111 (267)
T ss_dssp HHHHHHHHH-HTTCSSEEEECCCSC-CTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCCEEEEECHHHHHHHC
T ss_pred HHHHHHHHH-HcCCCEEEECCCCCC-CCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHhh
Confidence 445555555 678888776543322 22222222 233344443 3567665543 32 12
Q ss_pred hHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHHHhcCCCE
Q 020079 241 VFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPL 286 (331)
Q Consensus 241 ~~~~~~~~~~~G~~~~~~~~~~~~~~~e~~~i~~~~~l~~~~g~~~ 286 (331)
.+...+.+.+.|..+--.+ ..|. +...+....++++|...
T Consensus 112 ~e~f~~~~~~aGvdgvii~--Dlp~----ee~~~~~~~~~~~gl~~ 151 (267)
T 3vnd_A 112 IDEFYTKAQAAGVDSVLIA--DVPV----EESAPFSKAAKAHGIAP 151 (267)
T ss_dssp HHHHHHHHHHHTCCEEEET--TSCG----GGCHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHcCCCEEEeC--CCCH----hhHHHHHHHHHHcCCeE
Confidence 3444556677777653211 1221 22445667777777653
No 358
>3mdu_A N-formimino-L-glutamate iminohydrolase; amonohydralase family, N-formimino-L-glutamate iminohydrolas guanidino-L-glutamate; HET: NGQ; 1.40A {Pseudomonas aeruginosa} PDB: 3mdw_A*
Probab=22.99 E-value=15 Score=33.62 Aligned_cols=37 Identities=19% Similarity=0.202 Sum_probs=26.0
Q ss_pred cCCCEEEEeCCCHHHHHHHHHHHHcCCCEEEecCCccccc
Q 020079 282 VNTPLYVVHVMSMDAMEEIAKARKAGPNFLNTTIPLCDSC 321 (331)
Q Consensus 282 ~g~~~~i~H~~~~~~~~~i~~~~~~Gi~v~~~~~p~~~~~ 321 (331)
.+.+..+.|+...+. +.++++++.|+.+. +||.++..
T Consensus 261 ~~~~~~~~H~~~~~~-~~i~~la~~g~~v~--~~P~sn~~ 297 (453)
T 3mdu_A 261 VDQRWCLVHATHADP-AEVAAMARSGAVAG--LCLSTEAN 297 (453)
T ss_dssp CCTTEEEEECCSCCH-HHHHHHHHHTCEEE--ECHHHHHH
T ss_pred CCCCeEEEEcCCCCH-HHHHHHHHcCCEEE--ECchhHhh
Confidence 345788999876544 56888888887655 77866543
No 359
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=22.38 E-value=3.4e+02 Score=22.68 Aligned_cols=109 Identities=14% Similarity=-0.015 Sum_probs=56.5
Q ss_pred CCCChhhHHHHHHHHHhCCceEEecCcCCCCCcHHHHHHHHHH-HhccceeeccccccccCCChhhHHHHHHHHHHhCCC
Q 020079 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEK-KAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGIN 198 (331)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 198 (331)
...+.+++......+..+|+.+++-.. ........... .......-.+|+.+.. ..+....+.++.+ +.|++
T Consensus 54 p~~t~~~I~~lc~eA~~~~~aaVCV~p-----~~V~~a~~~L~gs~v~v~tVigFP~G~~-~~~~Kv~Ea~~Ai-~~GAd 126 (260)
T 3r12_A 54 PFATPDDIKKLCLEARENRFHGVCVNP-----CYVKLAREELEGTDVKVVTVVGFPLGAN-ETRTKAHEAIFAV-ESGAD 126 (260)
T ss_dssp TTCCHHHHHHHHHHHHHTTCSEEEECG-----GGHHHHHHHHTTSCCEEEEEESTTTCCS-CHHHHHHHHHHHH-HHTCS
T ss_pred CCCCHHHHHHHHHHHHhcCCcEEEECH-----HHHHHHHHHhcCCCCeEEEEecCCCCCC-cHHHHHHHHHHHH-HcCCC
Confidence 346788888888999999999987322 12222222211 1111111123333322 1233455666777 68999
Q ss_pred eEEEEEecCC----CCcCCHHHHHHHHHHHHHcCCcEEEEcCC
Q 020079 199 SFKFFMAYKG----SFMINDELLIEGFKRCKSLGALAMVHAEN 237 (331)
Q Consensus 199 ~ik~~~~~~~----~~~~~~~~l~~~~~~A~~~g~~v~~H~e~ 237 (331)
.+...++... .+..-.+++.++.+.+. +.++-+=.|.
T Consensus 127 EIDmViNig~lk~g~~~~v~~eI~~v~~a~~--~~~lKVIlEt 167 (260)
T 3r12_A 127 EIDMVINVGMLKAKEWEYVYEDIRSVVESVK--GKVVKVIIET 167 (260)
T ss_dssp EEEEECCHHHHHTTCHHHHHHHHHHHHHHTT--TSEEEEECCG
T ss_pred EEEEEeehhhhccccHHHHHHHHHHHHHhcC--CCcEEEEEeC
Confidence 9987766431 11112344555555543 4555444454
No 360
>2h9a_A Carbon monoxide dehydrogenase corrinoid/iron- sulfur protein, gamma subunit; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_A*
Probab=22.23 E-value=2.7e+02 Score=25.40 Aligned_cols=13 Identities=15% Similarity=0.115 Sum_probs=8.4
Q ss_pred CHHHHHHHHHHHH
Q 020079 213 NDELLIEGFKRCK 225 (331)
Q Consensus 213 ~~~~l~~~~~~A~ 225 (331)
+++.+++.++.+.
T Consensus 163 dp~vleaale~~~ 175 (445)
T 2h9a_A 163 TPEQLAAALETEG 175 (445)
T ss_dssp CHHHHHHHHHHHG
T ss_pred CHHHHHHHHHhcC
Confidence 5666666666654
No 361
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=22.10 E-value=3.2e+02 Score=22.28 Aligned_cols=46 Identities=17% Similarity=0.197 Sum_probs=22.2
Q ss_pred HHHHHHHHHhcCCCEEEEeC-----CC-HHHHHHHHHHHHcCCCEE-EecCCc
Q 020079 272 TTRAIRLAEFVNTPLYVVHV-----MS-MDAMEEIAKARKAGPNFL-NTTIPL 317 (331)
Q Consensus 272 i~~~~~l~~~~g~~~~i~H~-----~~-~~~~~~i~~~~~~Gi~v~-~~~~p~ 317 (331)
+.+.++.+.+.+.++.+++- +. .+-.+.++++.+.|..|. ..+.|+
T Consensus 114 ~~~l~~~~~~~~~kvI~S~Hdf~~tp~~~el~~~~~~~~~~gaDivKia~~a~ 166 (238)
T 1sfl_A 114 HQRIITHLQQYNKEVIISHHNFESTPPLDELQFIFFKMQKFNPEYVKLAVMPH 166 (238)
T ss_dssp HHHHHHHHHHTTCEEEEEEEESSCCCCHHHHHHHHHHHHTTCCSEEEEEECCS
T ss_pred HHHHHHHHHhcCCEEEEEecCCCCCcCHHHHHHHHHHHHHcCCCEEEEEecCC
Confidence 44455555555666555532 11 223445666666665432 334443
No 362
>4do7_A Amidohydrolase 2; enzyme function initiative, EFI, structural TIM-barrel fold, putative lactonase; 1.70A {Burkholderia multivorans} PDB: 4dlm_A 4dnm_A* 4dlf_A
Probab=21.46 E-value=3.6e+02 Score=22.57 Aligned_cols=45 Identities=9% Similarity=-0.040 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHhcCCCEEEEeCCCHHHHHHHHHHHHc-CCCEEEecC
Q 020079 270 EATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKA-GPNFLNTTI 315 (331)
Q Consensus 270 ~~i~~~~~l~~~~g~~~~i~H~~~~~~~~~i~~~~~~-Gi~v~~~~~ 315 (331)
......++++.+.|.++ ..|+....-.+..+.+++. +++|.++..
T Consensus 122 ~~~~~~~~~~~~~glpv-~ih~~~~~l~~l~~ll~~~P~l~iVi~H~ 167 (303)
T 4do7_A 122 ADFARGVAWLQANDYVY-DVLVFERQLPDVQAFCARHDAHWLVLDHA 167 (303)
T ss_dssp HHHHHHHHHHHHTTCEE-EECCCGGGHHHHHHHHHHCCSSCEEEGGG
T ss_pred HHHHHHHHHHHHCCCeE-EEecCHHHHHHHHHHHHHCCCCCEEEeCC
Confidence 45667888899999876 6676544333456666666 588887543
No 363
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=21.41 E-value=3.3e+02 Score=22.05 Aligned_cols=98 Identities=11% Similarity=0.075 Sum_probs=52.7
Q ss_pred CChhhHHHHHHHHHhCCceEEecCcCCCCCcHHHHHHHHHHHhccceeeccccccccCCChhhHHHHHHHHHHhCCCeEE
Q 020079 122 ETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFK 201 (331)
Q Consensus 122 ~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik 201 (331)
.+.++.....+.++.+|++.+.- . .......+.++...+..+...+..+ ....+ ++++... +.|++++-
T Consensus 26 ~~~~~~~~~~~al~~gGv~~iel-~-~k~~~~~~~i~~l~~~~~~l~vgaG----tvl~~----d~~~~A~-~aGAd~v~ 94 (224)
T 1vhc_A 26 DNADDILPLADTLAKNGLSVAEI-T-FRSEAAADAIRLLRANRPDFLIAAG----TVLTA----EQVVLAK-SSGADFVV 94 (224)
T ss_dssp SSGGGHHHHHHHHHHTTCCEEEE-E-TTSTTHHHHHHHHHHHCTTCEEEEE----SCCSH----HHHHHHH-HHTCSEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEE-e-ccCchHHHHHHHHHHhCcCcEEeeC----cEeeH----HHHHHHH-HCCCCEEE
Confidence 45566767788899999997651 1 1112345555555544433222221 11111 3444455 67888872
Q ss_pred EEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEcCCchhh
Q 020079 202 FFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAV 241 (331)
Q Consensus 202 ~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~ 241 (331)
.+ ..+. .+++.++++|.++..=+.++.+.
T Consensus 95 ---~p----~~d~----~v~~~ar~~g~~~i~Gv~t~~e~ 123 (224)
T 1vhc_A 95 ---TP----GLNP----KIVKLCQDLNFPITPGVNNPMAI 123 (224)
T ss_dssp ---CS----SCCH----HHHHHHHHTTCCEECEECSHHHH
T ss_pred ---EC----CCCH----HHHHHHHHhCCCEEeccCCHHHH
Confidence 22 2333 45567777888765545555544
No 364
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=21.37 E-value=3.7e+02 Score=22.65 Aligned_cols=118 Identities=12% Similarity=0.137 Sum_probs=66.3
Q ss_pred hhhHHHHHHHHHHhCCCeEEEEEe---cCCCCcCCHHHHHH---HHHHHHHcCCcEEEEcCCchhhHHHHHHHHHcCCCC
Q 020079 182 EVVSDEMEVMVKEKGINSFKFFMA---YKGSFMINDELLIE---GFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITG 255 (331)
Q Consensus 182 ~~~~~~~~~~~~~~g~~~ik~~~~---~~~~~~~~~~~l~~---~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~~~G~~~ 255 (331)
+...+...++. +.|++.|.+... |.......+|++++ +++..++.++++.+=....+-.+.. .+.|..-
T Consensus 30 ~~a~~~a~~m~-~~GAdiIDIGgeSTRPga~~vs~eeE~~Rv~pvi~~l~~~~v~iSIDT~~~~Va~~a----l~aGa~i 104 (270)
T 4hb7_A 30 ETAINRVKAMI-DEGADIIDVGGVSTRPGHEMVTLEEELNRVLPVVEAIVGFDVKISVDTFRSEVAEAC----LKLGVDM 104 (270)
T ss_dssp HHHHHHHHHHH-HTTCSEEEEESCCCSTTCCCCCHHHHHHHHHHHHHHHTTSSSEEEEECSCHHHHHHH----HHHTCCE
T ss_pred HHHHHHHHHHH-HCCCCEEEECCccCCCCCCCCchHHHHHHHHHHHHHhhcCCCeEEEECCCHHHHHHH----HHhccce
Confidence 34455666666 689998876422 12222223555554 4555556688888776655443333 3455532
Q ss_pred cccc--cccCChHHHHHHHHHHHHHHHhcCCCEEEEeCCC------------HHHHHHHHHHHHcCC---CEEEe
Q 020079 256 PEGH--ALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMS------------MDAMEEIAKARKAGP---NFLNT 313 (331)
Q Consensus 256 ~~~~--~~~~~~~~e~~~i~~~~~l~~~~g~~~~i~H~~~------------~~~~~~i~~~~~~Gi---~v~~~ 313 (331)
-... +...| +.+..+.++++++.+.|... ..-.+.+..++++|+ +|..|
T Consensus 105 INDVs~g~~d~---------~m~~~va~~~~~~vlMH~~~~p~~~~vv~ev~~~l~~~i~~a~~aGI~~~~IilD 170 (270)
T 4hb7_A 105 INDQWAGLYDH---------RMFQIVAKYDAEIILMHNGNGNRDEPVVEEMLTSLLAQAHQAKIAGIPSNKIWLD 170 (270)
T ss_dssp EEETTTTSSCT---------HHHHHHHHTTCEEEEECCCSSCCSSCHHHHHHHHHHHHHHHHHHTTCCGGGEEEE
T ss_pred eccccccccch---------hHHHHHHHcCCCeEEeccccCCccccchhHHHHHHHHHHHHHHHcCCCCceEEEe
Confidence 2211 11122 34567788899999999642 111235677888998 47765
No 365
>3ooq_A Amidohydrolase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, H PSI-2; 2.06A {Thermotoga maritima}
Probab=21.05 E-value=3.2e+02 Score=23.78 Aligned_cols=88 Identities=19% Similarity=0.085 Sum_probs=51.3
Q ss_pred HHHHHHHHcCCcEEEEcCCchhhHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHHHhcCCCEEEEeC----CC-
Q 020079 219 EGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHV----MS- 293 (331)
Q Consensus 219 ~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~e~~~i~~~~~l~~~~g~~~~i~H~----~~- 293 (331)
+.+..+.+.++++.+|+.....+....+.+.+.|....-.|+.. .. ..++.+.+.|+.+.++.. +.
T Consensus 211 e~l~~~~~~~~~v~iHa~~~~~i~~~~~~~~~~g~~~~i~H~~~---~~------~~~~~l~~~gv~v~~~P~~~~~~~~ 281 (396)
T 3ooq_A 211 EVGEMVLRKKIPARMHAHRADDILTAIRIAEEFGFNLVIEHGTE---AY------KISKVLAEKKIPVVVGPLLTFRTKL 281 (396)
T ss_dssp HHHHHHHTTSSCEEEEECSHHHHHHHHHHHHHHTCCEEEEECTT---GG------GGHHHHHHHTCCEEECCCSSCCCSG
T ss_pred HHHHHHHcCCCcEEEEECchhHHHHHHHHHHHcCCCEEEecCch---HH------HHHHHHHHCCCCEEECcccccccch
Confidence 33444458899999999777666666666666665311122211 11 124556666777555442 11
Q ss_pred ---HHHHHHHHHHHHcCCCEEEecC
Q 020079 294 ---MDAMEEIAKARKAGPNFLNTTI 315 (331)
Q Consensus 294 ---~~~~~~i~~~~~~Gi~v~~~~~ 315 (331)
......++.+.++|+++..++.
T Consensus 282 ~~~~~~~~~~~~l~~~Gv~v~lgtD 306 (396)
T 3ooq_A 282 ELKDLTMETIAKLLKDGVLIALMCD 306 (396)
T ss_dssp GGTTCCTTHHHHHHHTTCCEEECCT
T ss_pred hHHhhhhHHHHHHHHCCCEEEEEcC
Confidence 1233567888888888887764
No 366
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=21.02 E-value=3.5e+02 Score=22.23 Aligned_cols=51 Identities=10% Similarity=0.072 Sum_probs=28.0
Q ss_pred HHHHHHHHHHhCCCeEEEEEecCCC---CcCCHHHHHHHHHHHHHcCCcE-EEEc
Q 020079 185 SDEMEVMVKEKGINSFKFFMAYKGS---FMINDELLIEGFKRCKSLGALA-MVHA 235 (331)
Q Consensus 185 ~~~~~~~~~~~g~~~ik~~~~~~~~---~~~~~~~l~~~~~~A~~~g~~v-~~H~ 235 (331)
.++++++.++.|............. .....+.+++.++.|++.|.+. .+|.
T Consensus 57 ~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~v~~~~ 111 (301)
T 3cny_A 57 PEKLNYELKLRNLEIAGQWFSSYIIRDGIEKASEAFEKHCQYLKAINAPVAVVSE 111 (301)
T ss_dssp HHHHHHHHHHTTCEECEEEEEECHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHHHHHHHHCCCeEEEEeccCCCChhhHHHHHHHHHHHHHHHHHcCCCEEEecC
Confidence 4566666656666433322111000 0012356788999999999875 4563
No 367
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=20.99 E-value=2.6e+02 Score=23.43 Aligned_cols=46 Identities=9% Similarity=0.193 Sum_probs=35.6
Q ss_pred HhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEcCCchhhHHH
Q 020079 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEG 244 (331)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~ 244 (331)
..|++.+-.... ..+++.++.+.+.|+++|+-+.+=+.+.++.+..
T Consensus 124 ~~GADaILLI~a-----~L~~~~l~~l~~~A~~lGl~~LvEVh~~~El~rA 169 (258)
T 4a29_A 124 NLGADTVLLIVK-----ILTERELESLLEYARSYGMEPLILINDENDLDIA 169 (258)
T ss_dssp HHTCSEEEEEGG-----GSCHHHHHHHHHHHHHTTCCCEEEESSHHHHHHH
T ss_pred HcCCCeeehHHh-----hcCHHHHHHHHHHHHHHhHHHHHhcchHHHHHHH
Confidence 579998876543 3588999999999999999877766666665544
No 368
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=20.87 E-value=3.8e+02 Score=22.62 Aligned_cols=107 Identities=15% Similarity=0.093 Sum_probs=56.3
Q ss_pred CChhhHHHHHHHHHHhCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEcC-CchhhHHHHHHHHHcCCCCccc
Q 020079 180 WDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAE-NGDAVFEGQKRMIELGITGPEG 258 (331)
Q Consensus 180 ~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e-~~~~~~~~~~~~~~~G~~~~~~ 258 (331)
..++..+...++. +.|+..+|+ ... ......++...+.|+|++.|.. .+..... + -|..
T Consensus 104 s~~~a~~~a~rl~-kaGa~aVkl--Edg-------~~~~~~i~~l~~~GIpv~gHlgltPq~~~~----~--gg~~---- 163 (275)
T 3vav_A 104 TPADAFASAVKLM-RAGAQMVKF--EGG-------EWLAETVRFLVERAVPVCAHVGLTPQSVHA----F--GGFK---- 163 (275)
T ss_dssp SHHHHHHHHHHHH-HTTCSEEEE--ECC-------GGGHHHHHHHHHTTCCEEEEEESCGGGHHH----H--C-------
T ss_pred CHHHHHHHHHHHH-HcCCCEEEE--CCc-------hhHHHHHHHHHHCCCCEEEecCCCceEEec----c--CCeE----
Confidence 4455667777888 569999985 221 1223344444568999999974 3332211 0 1111
Q ss_pred ccccCChHHHHHHHHHHHHHHHhcCCCEEEEeCCCHHHHHHHHHHHHcCCCE
Q 020079 259 HALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGPNF 310 (331)
Q Consensus 259 ~~~~~~~~~e~~~i~~~~~l~~~~g~~~~i~H~~~~~~~~~i~~~~~~Gi~v 310 (331)
..++.... .+.+-+......+.|+-..+..+......+.+ .++-.+++
T Consensus 164 -vqgrt~~~-a~~~i~rA~a~~eAGA~~ivlE~vp~~~a~~I--t~~l~iP~ 211 (275)
T 3vav_A 164 -VQGKTEAG-AAQLLRDARAVEEAGAQLIVLEAVPTLVAAEV--TRELSIPT 211 (275)
T ss_dssp -CCCCSHHH-HHHHHHHHHHHHHHTCSEEEEESCCHHHHHHH--HHHCSSCE
T ss_pred -EEcCCHHH-HHHHHHHHHHHHHcCCCEEEecCCCHHHHHHH--HHhCCCCE
Confidence 11232221 23344455666778988777777655432333 23345664
No 369
>3nwr_A A rubisco-like protein; lyase; HET: KCX; 1.50A {Burkholderia fungorum}
Probab=20.53 E-value=4.8e+02 Score=23.65 Aligned_cols=105 Identities=10% Similarity=-0.035 Sum_probs=53.5
Q ss_pred CChhhHHHHHHHHHhCCceEEecCcCCCCC---cHHHHHHHHHH----HhccceeeccccccccCCChhhHHHHHHHHHH
Q 020079 122 ETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTAGFEAYEK----KAKNSCMDYGFHMAITKWDEVVSDEMEVMVKE 194 (331)
Q Consensus 122 ~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (331)
++++.+.......+.+|+--+-|-....+. ...+.+....+ +.....-.-.+...++...++..+..+... +
T Consensus 174 Ls~~~~a~~~ye~~~GGlDfiKDDE~~~~q~f~p~~eRv~~v~eai~rA~~eTGe~k~y~~NiT~~~~em~~Ra~~a~-e 252 (432)
T 3nwr_A 174 LSAAETAALVRELCEAGVDFIKDDEVCANPAHAPLAERVRAVMSEVRRYRERSGRPVMVAFNITDDLDAMRRHAELVE-R 252 (432)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEECCTTCSSCTTSCHHHHHHHHHHHHHHHHHHHSCCCEEEEECCSCHHHHHHHHHHHH-H
T ss_pred CCHHHHHHHHHHHHhcCCceeECCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCcceEEeecCCCHHHHHHHHHHHH-H
Confidence 577888888888899998888766543332 34443333222 221111111222333433344444444333 6
Q ss_pred hCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEc
Q 020079 195 KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA 235 (331)
Q Consensus 195 ~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~ 235 (331)
.|.+.+ ++++. ...... +-..+++.+++++.|-
T Consensus 253 ~G~~~~--mvd~~---~~G~~a---~~~l~r~~~~~lh~Hr 285 (432)
T 3nwr_A 253 EGGSCV--MASIN---WCGFSA---IQSLRRTTPLVLHAHR 285 (432)
T ss_dssp TTCCEE--EEEHH---HHCHHH---HHHHHHHCCSEEEEEC
T ss_pred cCCCEE--EEecc---CCCHHH---HHHHHhcCCceEEECc
Confidence 677654 22321 112223 3334456899999994
Done!